BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 039626
(628 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 164 bits (416), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 101/318 (31%), Positives = 169/318 (53%), Gaps = 24/318 (7%)
Query: 312 NEKPSNKKFDEESQDFLESISGVAQSLKVYSFKELQSATDNFSFTCRIQ----GSVYRGK 367
+KP + FD +++ E G LK +S +ELQ A+DNFS + G VY+G+
Sbjct: 2 RKKPQDHFFDVPAEEDPEVHLG---QLKRFSLRELQVASDNFSNKNILGRGGFGKVYKGR 58
Query: 368 I-NGGFAAIKKVNGDVSK--------EIALLNKINHSNLIILSGVCFNEGNCYLVYEYAV 418
+ +G A+K++ + + E+ +++ H NL+ L G C LVY Y
Sbjct: 59 LADGTLVAVKRLKEERXQGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMA 118
Query: 419 NGTLSDWVFSNKNEGKYLDWKQRIQIALDVATGLNYLHSFTNPPHVHKDINSSNVLLDSD 478
NG+++ + LDW +R +IAL A GL YLH +P +H+D+ ++N+LLD +
Sbjct: 119 NGSVASCLRERPESQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEE 178
Query: 479 LRAKIANFAMARPAEGQEGEFALTRHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLILEM 538
A + +F +A+ + ++ + GT G++APEYL G S K DV+ +GV++LE+
Sbjct: 179 FEAVVGDFGLAKLMDYKDXHVXXA--VRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLEL 236
Query: 539 LTGKEAAALH--AEENNMHLSDVLNAVLTKEDGEESLRHFIDPTLQGNYPLELALLVIRL 596
+TG+ A L A ++++ L D + +L E+ L +D LQGNY E +I++
Sbjct: 237 ITGQRAFDLARLANDDDVMLLDWVKGLLK----EKKLEALVDVDLQGNYKDEEVEQLIQV 292
Query: 597 IDACLKKDPTDRPTMYEI 614
C + P +RP M E+
Sbjct: 293 ALLCTQSSPMERPKMSEV 310
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 159 bits (402), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 93/293 (31%), Positives = 157/293 (53%), Gaps = 21/293 (7%)
Query: 337 SLKVYSFKELQSATDNFSFTCRIQ----GSVYRGKI-NGGFAAIKKVNGDVSK------- 384
LK +S +ELQ A+DNF + G VY+G++ +G A+K++ + ++
Sbjct: 16 QLKRFSLRELQVASDNFXNKNILGRGGFGKVYKGRLADGXLVAVKRLKEERTQGGELQFQ 75
Query: 385 -EIALLNKINHSNLIILSGVCFNEGNCYLVYEYAVNGTLSDWVFSNKNEGKYLDWKQRIQ 443
E+ +++ H NL+ L G C LVY Y NG+++ + LDW +R +
Sbjct: 76 TEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQR 135
Query: 444 IALDVATGLNYLHSFTNPPHVHKDINSSNVLLDSDLRAKIANFAMARPAEGQEGEFALTR 503
IAL A GL YLH +P +H+D+ ++N+LLD + A + +F +A+ + ++
Sbjct: 136 IALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDXHVXXA- 194
Query: 504 HIVGTKGYMAPEYLENGLVSTKLDVYAFGVLILEMLTGKEAAALH--AEENNMHLSDVLN 561
+ G G++APEYL G S K DV+ +GV++LE++TG+ A L A ++++ L D +
Sbjct: 195 -VRGXIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVK 253
Query: 562 AVLTKEDGEESLRHFIDPTLQGNYPLELALLVIRLIDACLKKDPTDRPTMYEI 614
+L E+ L +D LQGNY E +I++ C + P +RP M E+
Sbjct: 254 GLLK----EKKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEV 302
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 124 bits (310), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 83/231 (35%), Positives = 122/231 (52%), Gaps = 27/231 (11%)
Query: 341 YSFKELQSATDNFSFTCRIQGS----------VYRGKINGGFAAIKKVNGDVS------- 383
+SF EL++ T+NF G VY+G +N A+KK+ V
Sbjct: 9 FSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNNTTVAVKKLAAMVDITTEELK 68
Query: 384 ----KEIALLNKINHSNLIILSGVCFNEGNCYLVYEYAVNGTLSDWVFSNKNEGKYLDWK 439
+EI ++ K H NL+ L G + + LVY Y NG+L D + S + L W
Sbjct: 69 QQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRL-SCLDGTPPLSWH 127
Query: 440 QRIQIALDVATGLNYLHSFTNPPHVHKDINSSNVLLDSDLRAKIANFAMARPAEGQEGEF 499
R +IA A G+N+LH H+H+DI S+N+LLD AKI++F +AR +E + +
Sbjct: 128 MRCKIAQGAANGINFLHE---NHHIHRDIKSANILLDEAFTAKISDFGLARASE-KFAQX 183
Query: 500 ALTRHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLILEMLTGKEAAALHAE 550
+ IVGT YMAPE L G ++ K D+Y+FGV++LE++TG A H E
Sbjct: 184 VMXXRIVGTTAYMAPEALR-GEITPKSDIYSFGVVLLEIITGLPAVDEHRE 233
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 123 bits (309), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 83/231 (35%), Positives = 122/231 (52%), Gaps = 27/231 (11%)
Query: 341 YSFKELQSATDNFSFTCRIQGS----------VYRGKINGGFAAIKKVNGDVS------- 383
+SF EL++ T+NF G VY+G +N A+KK+ V
Sbjct: 15 FSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNNTTVAVKKLAAMVDITTEELK 74
Query: 384 ----KEIALLNKINHSNLIILSGVCFNEGNCYLVYEYAVNGTLSDWVFSNKNEGKYLDWK 439
+EI ++ K H NL+ L G + + LVY Y NG+L D + S + L W
Sbjct: 75 QQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRL-SCLDGTPPLSWH 133
Query: 440 QRIQIALDVATGLNYLHSFTNPPHVHKDINSSNVLLDSDLRAKIANFAMARPAEGQEGEF 499
R +IA A G+N+LH H+H+DI S+N+LLD AKI++F +AR +E + +
Sbjct: 134 MRCKIAQGAANGINFLHE---NHHIHRDIKSANILLDEAFTAKISDFGLARASE-KFAQT 189
Query: 500 ALTRHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLILEMLTGKEAAALHAE 550
+ IVGT YMAPE L G ++ K D+Y+FGV++LE++TG A H E
Sbjct: 190 VMXSRIVGTTAYMAPEALR-GEITPKSDIYSFGVVLLEIITGLPAVDEHRE 239
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 123 bits (309), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 83/231 (35%), Positives = 122/231 (52%), Gaps = 27/231 (11%)
Query: 341 YSFKELQSATDNFSFTCRIQGS----------VYRGKINGGFAAIKKVNGDVS------- 383
+SF EL++ T+NF G VY+G +N A+KK+ V
Sbjct: 15 FSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNNTTVAVKKLAAMVDITTEELK 74
Query: 384 ----KEIALLNKINHSNLIILSGVCFNEGNCYLVYEYAVNGTLSDWVFSNKNEGKYLDWK 439
+EI ++ K H NL+ L G + + LVY Y NG+L D + S + L W
Sbjct: 75 QQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRL-SCLDGTPPLSWH 133
Query: 440 QRIQIALDVATGLNYLHSFTNPPHVHKDINSSNVLLDSDLRAKIANFAMARPAEGQEGEF 499
R +IA A G+N+LH H+H+DI S+N+LLD AKI++F +AR +E + +
Sbjct: 134 MRCKIAQGAANGINFLHE---NHHIHRDIKSANILLDEAFTAKISDFGLARASE-KFAQT 189
Query: 500 ALTRHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLILEMLTGKEAAALHAE 550
+ IVGT YMAPE L G ++ K D+Y+FGV++LE++TG A H E
Sbjct: 190 VMXXRIVGTTAYMAPEALR-GEITPKSDIYSFGVVLLEIITGLPAVDEHRE 239
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 119 bits (297), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 83/231 (35%), Positives = 119/231 (51%), Gaps = 27/231 (11%)
Query: 341 YSFKELQSATDNFSFTCRIQGS----------VYRGKINGGFAAIKKVNGDVS------- 383
+SF EL++ T+NF G VY+G +N A+KK+ V
Sbjct: 6 FSFYELKNVTNNFDERPISVGGNKXGEGGFGVVYKGYVNNTTVAVKKLAAMVDITTEELK 65
Query: 384 ----KEIALLNKINHSNLIILSGVCFNEGNCYLVYEYAVNGTLSDWVFSNKNEGKYLDWK 439
+EI + K H NL+ L G + + LVY Y NG+L D + S + L W
Sbjct: 66 QQFDQEIKVXAKCQHENLVELLGFSSDGDDLCLVYVYXPNGSLLDRL-SCLDGTPPLSWH 124
Query: 440 QRIQIALDVATGLNYLHSFTNPPHVHKDINSSNVLLDSDLRAKIANFAMARPAEGQEGEF 499
R +IA A G+N+LH H+H+DI S+N+LLD AKI++F +AR +E
Sbjct: 125 XRCKIAQGAANGINFLHE---NHHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQXV 181
Query: 500 ALTRHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLILEMLTGKEAAALHAE 550
+R IVGT Y APE L G ++ K D+Y+FGV++LE++TG A H E
Sbjct: 182 XXSR-IVGTTAYXAPEALR-GEITPKSDIYSFGVVLLEIITGLPAVDEHRE 230
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 115 bits (288), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 87/291 (29%), Positives = 146/291 (50%), Gaps = 26/291 (8%)
Query: 345 ELQSATDNFSFTCRIQ----GSVYRGKI-NGGFAAIKKVNGDVSK-------EIALLNKI 392
+L+ AT+NF I G VY+G + +G A+K+ + S+ EI L+
Sbjct: 33 DLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIETLSFC 92
Query: 393 NHSNLIILSGVCFNEGNCYLVYEYAVNGTLSDWVFSNKNEGKYLDWKQRIQIALDVATGL 452
H +L+ L G C L+Y+Y NG L ++ + + W+QR++I + A GL
Sbjct: 93 RHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGL 152
Query: 453 NYLHSFTNPPHVHKDINSSNVLLDSDLRAKIANFAMARPAEGQE-GEFALTRHIVGTKGY 511
+YLH+ +H+D+ S N+LLD + KI +F +++ +G E G+ L + GT GY
Sbjct: 153 HYLHTRAI---IHRDVKSINILLDENFVPKITDFGISK--KGTELGQTHLXXVVKGTLGY 207
Query: 512 MAPEYLENGLVSTKLDVYAFGVLILEMLTGKEAAALHAEENNMHLSDVLNAVLTKEDGEE 571
+ PEY G ++ K DVY+FGV++ E+L + A ++L++ AV + +G+
Sbjct: 208 IDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEW--AVESHNNGQ- 264
Query: 572 SLRHFIDPTLQGNYPLELALLVIRLIDACLKKDPTDRPTM----YEIEHSL 618
L +DP L E CL DRP+M +++E++L
Sbjct: 265 -LEQIVDPNLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKLEYAL 314
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 114 bits (286), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 79/276 (28%), Positives = 137/276 (49%), Gaps = 35/276 (12%)
Query: 361 GSVYRGKINGGFAAIK----------KVNGDVSKEIALLNKINHSNLIILSGVCFNEGNC 410
G+V+R + +G A+K +VN + +E+A++ ++ H N+++ G N
Sbjct: 51 GTVHRAEWHGSDVAVKILMEQDFHAERVN-EFLREVAIMKRLRHPNIVLFMGAVTQPPNL 109
Query: 411 YLVYEYAVNGTLSDWVFSNKNEGKYLDWKQRIQIALDVATGLNYLHSFTNPPHVHKDINS 470
+V EY G+L + + LD ++R+ +A DVA G+NYLH+ NPP VH+D+ S
Sbjct: 110 SIVTEYLSRGSLYR-LLHKSGAREQLDERRRLSMAYDVAKGMNYLHN-RNPPIVHRDLKS 167
Query: 471 SNVLLDSDLRAKIANFAMARPAEGQEGEFALTRHIVGTKGYMAPEYLENGLVSTKLDVYA 530
N+L+D K+ +F ++R + F ++ GT +MAPE L + + K DVY+
Sbjct: 168 PNLLVDKKYTVKVCDFGLSR---LKASXFLXSKXAAGTPEWMAPEVLRDEPSNEKSDVYS 224
Query: 531 FGVLILEMLTGKEAAALHAEENNMHLSDVLNAVLTKEDGEESLRHFIDPTLQGNYPLELA 590
FGV++ E+ A L N++ + V+ AV G + R I P L
Sbjct: 225 FGVILWEL------ATLQQPWGNLNPAQVVAAV-----GFKCKRLEI--------PRNLN 265
Query: 591 LLVIRLIDACLKKDPTDRPTMYEIEHSLSNILNASL 626
V +I+ C +P RP+ I L ++ +++
Sbjct: 266 PQVAAIIEGCWTNEPWKRPSFATIMDLLRPLIKSAV 301
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 112 bits (281), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 86/291 (29%), Positives = 145/291 (49%), Gaps = 26/291 (8%)
Query: 345 ELQSATDNFSFTCRIQ----GSVYRGKI-NGGFAAIKKVNGDVSK-------EIALLNKI 392
+L+ AT+NF I G VY+G + +G A+K+ + S+ EI L+
Sbjct: 33 DLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIETLSFC 92
Query: 393 NHSNLIILSGVCFNEGNCYLVYEYAVNGTLSDWVFSNKNEGKYLDWKQRIQIALDVATGL 452
H +L+ L G C L+Y+Y NG L ++ + + W+QR++I + A GL
Sbjct: 93 RHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGL 152
Query: 453 NYLHSFTNPPHVHKDINSSNVLLDSDLRAKIANFAMARPAEGQE-GEFALTRHIVGTKGY 511
+YLH+ +H+D+ S N+LLD + KI +F +++ +G E + L + GT GY
Sbjct: 153 HYLHTRAI---IHRDVKSINILLDENFVPKITDFGISK--KGTELDQTHLXXVVKGTLGY 207
Query: 512 MAPEYLENGLVSTKLDVYAFGVLILEMLTGKEAAALHAEENNMHLSDVLNAVLTKEDGEE 571
+ PEY G ++ K DVY+FGV++ E+L + A ++L++ AV + +G+
Sbjct: 208 IDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEW--AVESHNNGQ- 264
Query: 572 SLRHFIDPTLQGNYPLELALLVIRLIDACLKKDPTDRPTM----YEIEHSL 618
L +DP L E CL DRP+M +++E++L
Sbjct: 265 -LEQIVDPNLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKLEYAL 314
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 112 bits (279), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 78/276 (28%), Positives = 137/276 (49%), Gaps = 35/276 (12%)
Query: 361 GSVYRGKINGGFAAIK----------KVNGDVSKEIALLNKINHSNLIILSGVCFNEGNC 410
G+V+R + +G A+K +VN + +E+A++ ++ H N+++ G N
Sbjct: 51 GTVHRAEWHGSDVAVKILMEQDFHAERVN-EFLREVAIMKRLRHPNIVLFMGAVTQPPNL 109
Query: 411 YLVYEYAVNGTLSDWVFSNKNEGKYLDWKQRIQIALDVATGLNYLHSFTNPPHVHKDINS 470
+V EY G+L + + LD ++R+ +A DVA G+NYLH+ NPP VH+++ S
Sbjct: 110 SIVTEYLSRGSLYR-LLHKSGAREQLDERRRLSMAYDVAKGMNYLHN-RNPPIVHRNLKS 167
Query: 471 SNVLLDSDLRAKIANFAMARPAEGQEGEFALTRHIVGTKGYMAPEYLENGLVSTKLDVYA 530
N+L+D K+ +F ++R + F ++ GT +MAPE L + + K DVY+
Sbjct: 168 PNLLVDKKYTVKVCDFGLSR---LKASTFLSSKSAAGTPEWMAPEVLRDEPSNEKSDVYS 224
Query: 531 FGVLILEMLTGKEAAALHAEENNMHLSDVLNAVLTKEDGEESLRHFIDPTLQGNYPLELA 590
FGV++ E+ A L N++ + V+ AV G + R I P L
Sbjct: 225 FGVILWEL------ATLQQPWGNLNPAQVVAAV-----GFKCKRLEI--------PRNLN 265
Query: 591 LLVIRLIDACLKKDPTDRPTMYEIEHSLSNILNASL 626
V +I+ C +P RP+ I L ++ +++
Sbjct: 266 PQVAAIIEGCWTNEPWKRPSFATIMDLLRPLIKSAV 301
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 67/201 (33%), Positives = 95/201 (47%), Gaps = 29/201 (14%)
Query: 361 GSVYRGKINGGFAAIKKVNGD-----------VSKEIALLNKINHSNLIILSGVCFNEGN 409
G VYR G A+K D V +E L + H N+I L GVC E N
Sbjct: 21 GKVYRAFWIGDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIALRGVCLKEPN 80
Query: 410 CYLVYEYAVNGTLSDWVFSNKNEGKYLDWKQRIQIALDVATGLNYLHSFTNPPHVHKDIN 469
LV E+A G L+ V S GK + + A+ +A G+NYLH P +H+D+
Sbjct: 81 LCLVMEFARGGPLNR-VLS----GKRIPPDILVNWAVQIARGMNYLHDEAIVPIIHRDLK 135
Query: 470 SSNVLL-----DSDLR---AKIANFAMARPAEGQEGEFALTRHIVGTKGYMAPEYLENGL 521
SSN+L+ + DL KI +F +AR E G +MAPE + +
Sbjct: 136 SSNILILQKVENGDLSNKILKITDFGLAR-----EWHRTTKMSAAGAYAWMAPEVIRASM 190
Query: 522 VSTKLDVYAFGVLILEMLTGK 542
S DV+++GVL+ E+LTG+
Sbjct: 191 FSKGSDVWSYGVLLWELLTGE 211
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 65/249 (26%), Positives = 119/249 (47%), Gaps = 35/249 (14%)
Query: 384 KEIALLNKINHSNLIILSGVCFNEGNCYLVYEYAVNGTLSDWVFSNKNEGKYLDWKQRIQ 443
KE+ ++ + H N++ GV + + + EY GTL + S ++ W QR+
Sbjct: 56 KEVKVMRCLEHPNVLKFIGVLYKDKRLNFITEYIKGGTLRGIIKSMDSQ---YPWSQRVS 112
Query: 444 IALDVATGLNYLHSFTNPPHVHKDINSSNVLLDSDLRAKIANFAMARPAEGQ----EGEF 499
A D+A+G+ YLHS +H+D+NS N L+ + +A+F +AR + EG
Sbjct: 113 FAKDIASGMAYLHSMNI---IHRDLNSHNCLVRENKNVVVADFGLARLMVDEKTQPEGLR 169
Query: 500 ALTRH-------IVGTKGYMAPEYLENGLVSTKLDVYAFGVLILEMLTGKEAAALHAEEN 552
+L + +VG +MAPE + K+DV++FG+++ E++ ++A+ +
Sbjct: 170 SLKKPDRKKRYTVVGNPYWMAPEMINGRSYDEKVDVFSFGIVLCEII-----GRVNADPD 224
Query: 553 NMHLSDVLNAVLTKEDGEESLRHFIDPTLQGNYPLELALLVIRLIDACLKKDPTDRPTMY 612
+L ++ L ++R F+D N P + +R C DP RP+
Sbjct: 225 --YLPRTMDFGL-------NVRGFLDRYCPPNCPPSFFPITVR----CCDLDPEKRPSFV 271
Query: 613 EIEHSLSNI 621
++EH L +
Sbjct: 272 KLEHWLETL 280
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 83/275 (30%), Positives = 130/275 (47%), Gaps = 40/275 (14%)
Query: 361 GSVYRGKINGGF-AAIKKVN-GDVS-----KEIALLNKINHSNLIILSGVCFNEGNCYLV 413
G V+ G NG AIK + G +S +E ++ K+ H L+ L V +E Y+V
Sbjct: 23 GEVWMGTWNGNTKVAIKTLKPGTMSPESFLEEAQIMKKLKHDKLVQLYAVV-SEEPIYIV 81
Query: 414 YEYAVNGTLSDWVFSNKNEGKYLDWKQRIQIALDVATGLNYLHSFTNPPHVHKDINSSNV 473
EY G+L D F EG+ L + +A VA G+ Y+ ++H+D+ S+N+
Sbjct: 82 TEYMNKGSLLD--FLKDGEGRALKLPNLVDMAAQVAAGMAYIERMN---YIHRDLRSANI 136
Query: 474 LLDSDLRAKIANFAMARPAEGQEGEFALTRHIVGTK---GYMAPEYLENGLVSTKLDVYA 530
L+ + L KIA+F +AR E E R G K + APE G + K DV++
Sbjct: 137 LVGNGLICKIADFGLARLIEDNE---XTARQ--GAKFPIKWTAPEAALYGRFTIKSDVWS 191
Query: 531 FGVLILEMLTGKEAAALHAEENNMHLSDVLNAVLTKEDGEESLRHFIDPTLQGNYPLELA 590
FG+L+ E++T + + NN +E E+ R + P Q + P+ L
Sbjct: 192 FGILLTELVT--KGRVPYPGMNN------------REVLEQVERGYRMPCPQ-DCPISLH 236
Query: 591 LLVIRLIDACLKKDPTDRPTMYEIEHSLSNILNAS 625
L+I C KKDP +RPT ++ L + A+
Sbjct: 237 ELMIH----CWKKDPEERPTFEYLQSFLEDYFTAT 267
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 89.7 bits (221), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 74/272 (27%), Positives = 126/272 (46%), Gaps = 34/272 (12%)
Query: 361 GSVYRGKINGG-FAAIKKVN-GDVS-----KEIALLNKINHSNLIILSGVCFNEGNCYLV 413
G V+ G NG AIK + G +S +E ++ KI H L+ L V +E Y+V
Sbjct: 32 GEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKIRHEKLVQLYAVV-SEEPIYIV 90
Query: 414 YEYAVNGTLSDWVFSNKNEGKYLDWKQRIQIALDVATGLNYLHSFTNPPHVHKDINSSNV 473
EY G+L D F GKYL Q + +A +A+G+ Y+ +VH+D+ ++N+
Sbjct: 91 TEYMSKGSLLD--FLKGEMGKYLRLPQLVDMAAQIASGMAYVERMN---YVHRDLRAANI 145
Query: 474 LLDSDLRAKIANFAMARPAEGQEGEFALTRHIVGTKGYMAPEYLENGLVSTKLDVYAFGV 533
L+ +L K+A+F +AR E + E+ + + APE G + K DV++FG+
Sbjct: 146 LVGENLVCKVADFGLARLIE--DNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGI 203
Query: 534 LILEMLTGKEAAALHAEENNMHLSDVLNAVLTKEDGEESLRHFIDPTLQGNYPLELALLV 593
L+ E+ T ++ +E ++ R + P P E +
Sbjct: 204 LLTELTTKGRVP--------------YPGMVNREVLDQVERGYRMPC-----PPECPESL 244
Query: 594 IRLIDACLKKDPTDRPTMYEIEHSLSNILNAS 625
L+ C +KDP +RPT ++ L + ++
Sbjct: 245 HDLMCQCWRKDPEERPTFEYLQAFLEDYFTST 276
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 89.0 bits (219), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 73/272 (26%), Positives = 126/272 (46%), Gaps = 34/272 (12%)
Query: 361 GSVYRGKINGG-FAAIKKVN-GDVS-----KEIALLNKINHSNLIILSGVCFNEGNCYLV 413
G V+ G NG AIK + G +S +E ++ K+ H L+ L V +E Y+V
Sbjct: 21 GEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVV-SEEPIYIV 79
Query: 414 YEYAVNGTLSDWVFSNKNEGKYLDWKQRIQIALDVATGLNYLHSFTNPPHVHKDINSSNV 473
EY G+L D F GKYL Q + +A +A+G+ Y+ +VH+D+ ++N+
Sbjct: 80 TEYMSKGSLLD--FLKGEMGKYLRLPQLVDMAAQIASGMAYVERMN---YVHRDLRAANI 134
Query: 474 LLDSDLRAKIANFAMARPAEGQEGEFALTRHIVGTKGYMAPEYLENGLVSTKLDVYAFGV 533
L+ +L K+A+F +AR E + E+ + + APE G + K DV++FG+
Sbjct: 135 LVGENLVCKVADFGLARLIE--DNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGI 192
Query: 534 LILEMLTGKEAAALHAEENNMHLSDVLNAVLTKEDGEESLRHFIDPTLQGNYPLELALLV 593
L+ E+ T ++ +E ++ R + P P E +
Sbjct: 193 LLTELTTKGRVP--------------YPGMVNREVLDQVERGYRMPC-----PPECPESL 233
Query: 594 IRLIDACLKKDPTDRPTMYEIEHSLSNILNAS 625
L+ C +KDP +RPT ++ L + ++
Sbjct: 234 HDLMCQCWRKDPEERPTFEYLQAFLEDYFTST 265
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 88.6 bits (218), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 73/272 (26%), Positives = 126/272 (46%), Gaps = 34/272 (12%)
Query: 361 GSVYRGKINGG-FAAIKKVN-GDVS-----KEIALLNKINHSNLIILSGVCFNEGNCYLV 413
G V+ G NG AIK + G +S +E ++ K+ H L+ L V +E Y+V
Sbjct: 32 GEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAV-VSEEPIYIV 90
Query: 414 YEYAVNGTLSDWVFSNKNEGKYLDWKQRIQIALDVATGLNYLHSFTNPPHVHKDINSSNV 473
EY G+L D F GKYL Q + +A +A+G+ Y+ +VH+D+ ++N+
Sbjct: 91 CEYMSKGSLLD--FLKGEMGKYLRLPQLVDMAAQIASGMAYVERMN---YVHRDLRAANI 145
Query: 474 LLDSDLRAKIANFAMARPAEGQEGEFALTRHIVGTKGYMAPEYLENGLVSTKLDVYAFGV 533
L+ +L K+A+F +AR E + E+ + + APE G + K DV++FG+
Sbjct: 146 LVGENLVCKVADFGLARLIE--DNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGI 203
Query: 534 LILEMLTGKEAAALHAEENNMHLSDVLNAVLTKEDGEESLRHFIDPTLQGNYPLELALLV 593
L+ E+ T ++ +E ++ R + P P E +
Sbjct: 204 LLTELTTKGRVP--------------YPGMVNREVLDQVERGYRMPC-----PPECPESL 244
Query: 594 IRLIDACLKKDPTDRPTMYEIEHSLSNILNAS 625
L+ C +KDP +RPT ++ L + ++
Sbjct: 245 HDLMCQCWRKDPEERPTFEYLQAFLEDYFTST 276
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 88.6 bits (218), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 73/272 (26%), Positives = 126/272 (46%), Gaps = 34/272 (12%)
Query: 361 GSVYRGKINGG-FAAIKKVN-GDVS-----KEIALLNKINHSNLIILSGVCFNEGNCYLV 413
G V+ G NG AIK + G +S +E ++ K+ H L+ L V +E Y+V
Sbjct: 23 GEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVV-SEEPIYIV 81
Query: 414 YEYAVNGTLSDWVFSNKNEGKYLDWKQRIQIALDVATGLNYLHSFTNPPHVHKDINSSNV 473
EY G+L D F GKYL Q + +A +A+G+ Y+ +VH+D+ ++N+
Sbjct: 82 TEYMSKGSLLD--FLKGEMGKYLRLPQLVDMAAQIASGMAYVERMN---YVHRDLRAANI 136
Query: 474 LLDSDLRAKIANFAMARPAEGQEGEFALTRHIVGTKGYMAPEYLENGLVSTKLDVYAFGV 533
L+ +L K+A+F +AR E + E+ + + APE G + K DV++FG+
Sbjct: 137 LVGENLVCKVADFGLARLIE--DNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGI 194
Query: 534 LILEMLTGKEAAALHAEENNMHLSDVLNAVLTKEDGEESLRHFIDPTLQGNYPLELALLV 593
L+ E+ T ++ +E ++ R + P P E +
Sbjct: 195 LLTELTTKGRVP--------------YPGMVNREVLDQVERGYRMPC-----PPECPESL 235
Query: 594 IRLIDACLKKDPTDRPTMYEIEHSLSNILNAS 625
L+ C +KDP +RPT ++ L + ++
Sbjct: 236 HDLMCQCWRKDPEERPTFEYLQAFLEDYFTST 267
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 73/272 (26%), Positives = 126/272 (46%), Gaps = 34/272 (12%)
Query: 361 GSVYRGKINGG-FAAIKKVN-GDVS-----KEIALLNKINHSNLIILSGVCFNEGNCYLV 413
G V+ G NG AIK + G +S +E ++ K+ H L+ L V +E Y+V
Sbjct: 32 GEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVV-SEEPIYIV 90
Query: 414 YEYAVNGTLSDWVFSNKNEGKYLDWKQRIQIALDVATGLNYLHSFTNPPHVHKDINSSNV 473
EY G+L D F GKYL Q + +A +A+G+ Y+ +VH+D+ ++N+
Sbjct: 91 TEYMSKGSLLD--FLKGEMGKYLRLPQLVDMAAQIASGMAYVERMN---YVHRDLRAANI 145
Query: 474 LLDSDLRAKIANFAMARPAEGQEGEFALTRHIVGTKGYMAPEYLENGLVSTKLDVYAFGV 533
L+ +L K+A+F +AR E + E+ + + APE G + K DV++FG+
Sbjct: 146 LVGENLVCKVADFGLARLIE--DNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGI 203
Query: 534 LILEMLTGKEAAALHAEENNMHLSDVLNAVLTKEDGEESLRHFIDPTLQGNYPLELALLV 593
L+ E+ T ++ +E ++ R + P P E +
Sbjct: 204 LLTELTTKGRVP--------------YPGMVNREVLDQVERGYRMPC-----PPECPESL 244
Query: 594 IRLIDACLKKDPTDRPTMYEIEHSLSNILNAS 625
L+ C +KDP +RPT ++ L + ++
Sbjct: 245 HDLMCQCWRKDPEERPTFEYLQAFLEDYFTST 276
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 73/272 (26%), Positives = 126/272 (46%), Gaps = 34/272 (12%)
Query: 361 GSVYRGKINGG-FAAIKKVN-GDVS-----KEIALLNKINHSNLIILSGVCFNEGNCYLV 413
G V+ G NG AIK + G +S +E ++ K+ H L+ L V +E Y+V
Sbjct: 32 GEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVV-SEEPIYIV 90
Query: 414 YEYAVNGTLSDWVFSNKNEGKYLDWKQRIQIALDVATGLNYLHSFTNPPHVHKDINSSNV 473
EY G+L D F GKYL Q + +A +A+G+ Y+ +VH+D+ ++N+
Sbjct: 91 IEYMSKGSLLD--FLKGEMGKYLRLPQLVDMAAQIASGMAYVERMN---YVHRDLRAANI 145
Query: 474 LLDSDLRAKIANFAMARPAEGQEGEFALTRHIVGTKGYMAPEYLENGLVSTKLDVYAFGV 533
L+ +L K+A+F +AR E + E+ + + APE G + K DV++FG+
Sbjct: 146 LVGENLVCKVADFGLARLIE--DNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGI 203
Query: 534 LILEMLTGKEAAALHAEENNMHLSDVLNAVLTKEDGEESLRHFIDPTLQGNYPLELALLV 593
L+ E+ T ++ +E ++ R + P P E +
Sbjct: 204 LLTELTTKGRVP--------------YPGMVNREVLDQVERGYRMPC-----PPECPESL 244
Query: 594 IRLIDACLKKDPTDRPTMYEIEHSLSNILNAS 625
L+ C +KDP +RPT ++ L + ++
Sbjct: 245 HDLMCQCWRKDPEERPTFEYLQAFLEDYFTST 276
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 73/272 (26%), Positives = 125/272 (45%), Gaps = 34/272 (12%)
Query: 361 GSVYRGKINGG-FAAIKKVN-GDVS-----KEIALLNKINHSNLIILSGVCFNEGNCYLV 413
G V+ G NG AIK + G +S +E ++ K+ H L+ L V +E Y+V
Sbjct: 32 GEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAV-VSEEPIYIV 90
Query: 414 YEYAVNGTLSDWVFSNKNEGKYLDWKQRIQIALDVATGLNYLHSFTNPPHVHKDINSSNV 473
EY G L D F GKYL Q + +A +A+G+ Y+ +VH+D+ ++N+
Sbjct: 91 MEYMSKGCLLD--FLKGEMGKYLRLPQLVDMAAQIASGMAYVERMN---YVHRDLRAANI 145
Query: 474 LLDSDLRAKIANFAMARPAEGQEGEFALTRHIVGTKGYMAPEYLENGLVSTKLDVYAFGV 533
L+ +L K+A+F +AR E + E+ + + APE G + K DV++FG+
Sbjct: 146 LVGENLVCKVADFGLARLIE--DNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGI 203
Query: 534 LILEMLTGKEAAALHAEENNMHLSDVLNAVLTKEDGEESLRHFIDPTLQGNYPLELALLV 593
L+ E+ T ++ +E ++ R + P P E +
Sbjct: 204 LLTELTTKGRVP--------------YPGMVNREVLDQVERGYRMPC-----PPECPESL 244
Query: 594 IRLIDACLKKDPTDRPTMYEIEHSLSNILNAS 625
L+ C +KDP +RPT ++ L + ++
Sbjct: 245 HDLMCQCWRKDPEERPTFEYLQAFLEDYFTST 276
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 73/272 (26%), Positives = 125/272 (45%), Gaps = 34/272 (12%)
Query: 361 GSVYRGKINGG-FAAIKKVN-GDVS-----KEIALLNKINHSNLIILSGVCFNEGNCYLV 413
G V+ G NG AIK + G +S +E ++ K+ H L+ L V +E Y+V
Sbjct: 32 GEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAV-VSEEPIYIV 90
Query: 414 YEYAVNGTLSDWVFSNKNEGKYLDWKQRIQIALDVATGLNYLHSFTNPPHVHKDINSSNV 473
EY G L D F GKYL Q + +A +A+G+ Y+ +VH+D+ ++N+
Sbjct: 91 TEYMSKGCLLD--FLKGEMGKYLRLPQLVDMAAQIASGMAYVERMN---YVHRDLRAANI 145
Query: 474 LLDSDLRAKIANFAMARPAEGQEGEFALTRHIVGTKGYMAPEYLENGLVSTKLDVYAFGV 533
L+ +L K+A+F +AR E + E+ + + APE G + K DV++FG+
Sbjct: 146 LVGENLVCKVADFGLARLIE--DNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGI 203
Query: 534 LILEMLTGKEAAALHAEENNMHLSDVLNAVLTKEDGEESLRHFIDPTLQGNYPLELALLV 593
L+ E+ T ++ +E ++ R + P P E +
Sbjct: 204 LLTELTTKGRVP--------------YPGMVNREVLDQVERGYRMPC-----PPECPESL 244
Query: 594 IRLIDACLKKDPTDRPTMYEIEHSLSNILNAS 625
L+ C +KDP +RPT ++ L + ++
Sbjct: 245 HDLMCQCWRKDPEERPTFEYLQAFLEDYFTST 276
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 73/272 (26%), Positives = 126/272 (46%), Gaps = 34/272 (12%)
Query: 361 GSVYRGKINGG-FAAIKKVN-GDVS-----KEIALLNKINHSNLIILSGVCFNEGNCYLV 413
G V+ G NG AIK + G +S +E ++ K+ H L+ L V +E Y+V
Sbjct: 32 GEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVV-SEEPIYIV 90
Query: 414 YEYAVNGTLSDWVFSNKNEGKYLDWKQRIQIALDVATGLNYLHSFTNPPHVHKDINSSNV 473
EY G+L D F GKYL Q + +A +A+G+ Y+ +VH+D+ ++N+
Sbjct: 91 TEYMSKGSLLD--FLKGEMGKYLRLPQLVDMAAQIASGMAYVERMN---YVHRDLAAANI 145
Query: 474 LLDSDLRAKIANFAMARPAEGQEGEFALTRHIVGTKGYMAPEYLENGLVSTKLDVYAFGV 533
L+ +L K+A+F +AR E + E+ + + APE G + K DV++FG+
Sbjct: 146 LVGENLVCKVADFGLARLIE--DNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGI 203
Query: 534 LILEMLTGKEAAALHAEENNMHLSDVLNAVLTKEDGEESLRHFIDPTLQGNYPLELALLV 593
L+ E+ T ++ +E ++ R + P P E +
Sbjct: 204 LLTELTTKGRVP--------------YPGMVNREVLDQVERGYRMPC-----PPECPESL 244
Query: 594 IRLIDACLKKDPTDRPTMYEIEHSLSNILNAS 625
L+ C +KDP +RPT ++ L + ++
Sbjct: 245 HDLMCQCWRKDPEERPTFEYLQAFLEDYFTST 276
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 72/272 (26%), Positives = 126/272 (46%), Gaps = 34/272 (12%)
Query: 361 GSVYRGKINGG-FAAIKKVN-GDVS-----KEIALLNKINHSNLIILSGVCFNEGNCYLV 413
G V+ G NG AIK + G++S +E ++ K+ H L+ L V +E Y+V
Sbjct: 199 GEVWMGTWNGTTRVAIKTLKPGNMSPEAFLQEAQVMKKLRHEKLVQLYAVV-SEEPIYIV 257
Query: 414 YEYAVNGTLSDWVFSNKNEGKYLDWKQRIQIALDVATGLNYLHSFTNPPHVHKDINSSNV 473
EY G+L D F GKYL Q + +A +A+G+ Y+ +VH+D+ ++N+
Sbjct: 258 TEYMSKGSLLD--FLKGEMGKYLRLPQLVDMAAQIASGMAYVERMN---YVHRDLRAANI 312
Query: 474 LLDSDLRAKIANFAMARPAEGQEGEFALTRHIVGTKGYMAPEYLENGLVSTKLDVYAFGV 533
L+ +L K+A+F + R E + E+ + + APE G + K DV++FG+
Sbjct: 313 LVGENLVCKVADFGLGRLIE--DNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGI 370
Query: 534 LILEMLTGKEAAALHAEENNMHLSDVLNAVLTKEDGEESLRHFIDPTLQGNYPLELALLV 593
L+ E+ T ++ +E ++ R + P P E +
Sbjct: 371 LLTELTTKGRVP--------------YPGMVNREVLDQVERGYRMPC-----PPECPESL 411
Query: 594 IRLIDACLKKDPTDRPTMYEIEHSLSNILNAS 625
L+ C +KDP +RPT ++ L + ++
Sbjct: 412 HDLMCQCWRKDPEERPTFEYLQAFLEDYFTST 443
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 72/272 (26%), Positives = 126/272 (46%), Gaps = 34/272 (12%)
Query: 361 GSVYRGKINGG-FAAIKKVN-GDVS-----KEIALLNKINHSNLIILSGVCFNEGNCYLV 413
G V+ G NG AIK + G +S +E ++ K+ H L+ L V +E Y+V
Sbjct: 198 GEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVV-SEEPIYIV 256
Query: 414 YEYAVNGTLSDWVFSNKNEGKYLDWKQRIQIALDVATGLNYLHSFTNPPHVHKDINSSNV 473
EY G+L D F GKYL Q + +A +A+G+ Y+ +VH+D+ ++N+
Sbjct: 257 TEYMSKGSLLD--FLKGETGKYLRLPQLVDMAAQIASGMAYVERMN---YVHRDLRAANI 311
Query: 474 LLDSDLRAKIANFAMARPAEGQEGEFALTRHIVGTKGYMAPEYLENGLVSTKLDVYAFGV 533
L+ +L K+A+F +AR E + E+ + + APE G + K DV++FG+
Sbjct: 312 LVGENLVCKVADFGLARLIE--DNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGI 369
Query: 534 LILEMLTGKEAAALHAEENNMHLSDVLNAVLTKEDGEESLRHFIDPTLQGNYPLELALLV 593
L+ E+ T ++ +E ++ R + P P E +
Sbjct: 370 LLTELTTKGRVP--------------YPGMVNREVLDQVERGYRMPC-----PPECPESL 410
Query: 594 IRLIDACLKKDPTDRPTMYEIEHSLSNILNAS 625
L+ C +K+P +RPT ++ L + ++
Sbjct: 411 HDLMCQCWRKEPEERPTFEYLQAFLEDYFTST 442
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 72/272 (26%), Positives = 126/272 (46%), Gaps = 34/272 (12%)
Query: 361 GSVYRGKINGG-FAAIKKVN-GDVS-----KEIALLNKINHSNLIILSGVCFNEGNCYLV 413
G V+ G NG AIK + G +S +E ++ K+ H L+ L V +E Y+V
Sbjct: 198 GEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVV-SEEPIYIV 256
Query: 414 YEYAVNGTLSDWVFSNKNEGKYLDWKQRIQIALDVATGLNYLHSFTNPPHVHKDINSSNV 473
EY G+L D F GKYL Q + +A +A+G+ Y+ +VH+D+ ++N+
Sbjct: 257 TEYMSKGSLLD--FLKGETGKYLRLPQLVDMAAQIASGMAYVERMN---YVHRDLRAANI 311
Query: 474 LLDSDLRAKIANFAMARPAEGQEGEFALTRHIVGTKGYMAPEYLENGLVSTKLDVYAFGV 533
L+ +L K+A+F +AR E + E+ + + APE G + K DV++FG+
Sbjct: 312 LVGENLVCKVADFGLARLIE--DNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGI 369
Query: 534 LILEMLTGKEAAALHAEENNMHLSDVLNAVLTKEDGEESLRHFIDPTLQGNYPLELALLV 593
L+ E+ T ++ +E ++ R + P P E +
Sbjct: 370 LLTELTTKGRVP--------------YPGMVNREVLDQVERGYRMPC-----PPECPESL 410
Query: 594 IRLIDACLKKDPTDRPTMYEIEHSLSNILNAS 625
L+ C +K+P +RPT ++ L + ++
Sbjct: 411 HDLMCQCWRKEPEERPTFEYLQAFLEDYFTST 442
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 72/272 (26%), Positives = 126/272 (46%), Gaps = 34/272 (12%)
Query: 361 GSVYRGKINGG-FAAIKKVN-GDVS-----KEIALLNKINHSNLIILSGVCFNEGNCYLV 413
G V+ G NG AIK + G +S +E ++ K+ H L+ L V +E Y+V
Sbjct: 25 GEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVV-SEEPIYIV 83
Query: 414 YEYAVNGTLSDWVFSNKNEGKYLDWKQRIQIALDVATGLNYLHSFTNPPHVHKDINSSNV 473
EY G+L D F GKYL Q + +A +A+G+ Y+ +VH+D+ ++N+
Sbjct: 84 TEYMSKGSLLD--FLKGETGKYLRLPQLVDMAAQIASGMAYVERMN---YVHRDLRAANI 138
Query: 474 LLDSDLRAKIANFAMARPAEGQEGEFALTRHIVGTKGYMAPEYLENGLVSTKLDVYAFGV 533
L+ +L K+A+F +AR E + E+ + + APE G + K DV++FG+
Sbjct: 139 LVGENLVCKVADFGLARLIE--DNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGI 196
Query: 534 LILEMLTGKEAAALHAEENNMHLSDVLNAVLTKEDGEESLRHFIDPTLQGNYPLELALLV 593
L+ E+ T ++ +E ++ R + P P E +
Sbjct: 197 LLTELTTKGRVP--------------YPGMVNREVLDQVERGYRMPC-----PPECPESL 237
Query: 594 IRLIDACLKKDPTDRPTMYEIEHSLSNILNAS 625
L+ C +K+P +RPT ++ L + ++
Sbjct: 238 HDLMCQCWRKEPEERPTFEYLQAFLEDYFTST 269
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 76/275 (27%), Positives = 126/275 (45%), Gaps = 40/275 (14%)
Query: 361 GSVYRGKINGG-FAAIKKVN-GDVS-----KEIALLNKINHSNLIILSGVCFNEGNCYLV 413
G V+ G NG AIK + G +S +E ++ K+ H L+ L V +E Y+V
Sbjct: 32 GEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVV-SEEPIYIV 90
Query: 414 YEYAVNGTLSDWVFSNKNEGKYLDWKQRIQIALDVATGLNYLHSFTNPPHVHKDINSSNV 473
EY G+L D F GKYL Q + +A +A+G+ Y+ +VH+D+ ++N+
Sbjct: 91 IEYMSKGSLLD--FLKGEMGKYLRLPQLVDMAAQIASGMAYVERMN---YVHRDLRAANI 145
Query: 474 LLDSDLRAKIANFAMARPAEGQEGEFALTRHIVGTK---GYMAPEYLENGLVSTKLDVYA 530
L+ +L K+A+F +AR E E R G K + APE G + K DV++
Sbjct: 146 LVGENLVCKVADFGLARLIEDNE---XTARQ--GAKFPIKWTAPEAALYGRFTIKSDVWS 200
Query: 531 FGVLILEMLTGKEAAALHAEENNMHLSDVLNAVLTKEDGEESLRHFIDPTLQGNYPLELA 590
FG+L+ E+ T ++ +E ++ R + P P E
Sbjct: 201 FGILLTELTTKGRVP--------------YPGMVNREVLDQVERGYRMPC-----PPECP 241
Query: 591 LLVIRLIDACLKKDPTDRPTMYEIEHSLSNILNAS 625
+ L+ C +KDP +RPT ++ L + ++
Sbjct: 242 ESLHDLMCQCWRKDPEERPTFEYLQAFLEDYFTST 276
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 72/272 (26%), Positives = 126/272 (46%), Gaps = 34/272 (12%)
Query: 361 GSVYRGKINGG-FAAIKKVN-GDVS-----KEIALLNKINHSNLIILSGVCFNEGNCYLV 413
G V+ G NG AIK + G +S +E ++ K+ H L+ L V +E Y+V
Sbjct: 281 GEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVV-SEEPIYIV 339
Query: 414 YEYAVNGTLSDWVFSNKNEGKYLDWKQRIQIALDVATGLNYLHSFTNPPHVHKDINSSNV 473
EY G+L D F GKYL Q + +A +A+G+ Y+ +VH+D+ ++N+
Sbjct: 340 TEYMSKGSLLD--FLKGETGKYLRLPQLVDMAAQIASGMAYVERMN---YVHRDLRAANI 394
Query: 474 LLDSDLRAKIANFAMARPAEGQEGEFALTRHIVGTKGYMAPEYLENGLVSTKLDVYAFGV 533
L+ +L K+A+F +AR E + E+ + + APE G + K DV++FG+
Sbjct: 395 LVGENLVCKVADFGLARLIE--DNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGI 452
Query: 534 LILEMLTGKEAAALHAEENNMHLSDVLNAVLTKEDGEESLRHFIDPTLQGNYPLELALLV 593
L+ E+ T ++ +E ++ R + P P E +
Sbjct: 453 LLTELTTKGRVP--------------YPGMVNREVLDQVERGYRMPC-----PPECPESL 493
Query: 594 IRLIDACLKKDPTDRPTMYEIEHSLSNILNAS 625
L+ C +K+P +RPT ++ L + ++
Sbjct: 494 HDLMCQCWRKEPEERPTFEYLQAFLEDYFTST 525
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 72/272 (26%), Positives = 126/272 (46%), Gaps = 34/272 (12%)
Query: 361 GSVYRGKINGG-FAAIKKVN-GDVS-----KEIALLNKINHSNLIILSGVCFNEGNCYLV 413
G V+ G NG AIK + G +S +E ++ K+ H L+ L V +E Y+V
Sbjct: 198 GEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVV-SEEPIYIV 256
Query: 414 YEYAVNGTLSDWVFSNKNEGKYLDWKQRIQIALDVATGLNYLHSFTNPPHVHKDINSSNV 473
EY G+L D F GKYL Q + +A +A+G+ Y+ +VH+D+ ++N+
Sbjct: 257 GEYMSKGSLLD--FLKGETGKYLRLPQLVDMAAQIASGMAYVERMN---YVHRDLRAANI 311
Query: 474 LLDSDLRAKIANFAMARPAEGQEGEFALTRHIVGTKGYMAPEYLENGLVSTKLDVYAFGV 533
L+ +L K+A+F +AR E + E+ + + APE G + K DV++FG+
Sbjct: 312 LVGENLVCKVADFGLARLIE--DNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGI 369
Query: 534 LILEMLTGKEAAALHAEENNMHLSDVLNAVLTKEDGEESLRHFIDPTLQGNYPLELALLV 593
L+ E+ T ++ +E ++ R + P P E +
Sbjct: 370 LLTELTTKGRVP--------------YPGMVNREVLDQVERGYRMPC-----PPECPESL 410
Query: 594 IRLIDACLKKDPTDRPTMYEIEHSLSNILNAS 625
L+ C +K+P +RPT ++ L + ++
Sbjct: 411 HDLMCQCWRKEPEERPTFEYLQAFLEDYFTST 442
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 72/272 (26%), Positives = 120/272 (44%), Gaps = 39/272 (14%)
Query: 361 GSVYRGKINGGFAAIKKVNGDVSK-----EIALLNKINHSNLIILSGVCFNEGNCYLVYE 415
G V + K AIK++ + + E+ L+++NH N++ L G C N LV E
Sbjct: 23 GVVCKAKWRAKDVAIKQIESESERKAFIVELRQLSRVNHPNIVKLYGACLNP--VCLVME 80
Query: 416 YAVNGTLSDWVFSNKNEGKYLDWKQRIQIALDVATGLNYLHSFTNPPHVHKDINSSNVLL 475
YA G+L + V Y + L + G+ YLHS +H+D+ N+LL
Sbjct: 81 YAEGGSLYN-VLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLL 139
Query: 476 DSDLRA-KIANFAMARPAEGQEGEFALTRHIVGTKG---YMAPEYLENGLVSTKLDVYAF 531
+ KI +F A + H+ KG +MAPE E S K DV+++
Sbjct: 140 VAGGTVLKICDFGTA---------CDIQTHMTNNKGSAAWMAPEVFEGSNYSEKCDVFSW 190
Query: 532 GVLILEMLTGKEAAALHAEENNMHLSDVLNAVLTKEDGEESLRHFIDPTLQGNYPLELAL 591
G+++ E++T ++ +E ++ AV + P L N P +
Sbjct: 191 GIILWEVITRRKP----FDEIGGPAFRIMWAV----------HNGTRPPLIKNLPKPIES 236
Query: 592 LVIRLIDACLKKDPTDRPTMYEIEHSLSNILN 623
L+ R C KDP+ RP+M EI +++++
Sbjct: 237 LMTR----CWSKDPSQRPSMEEIVKIMTHLMR 264
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 85.9 bits (211), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 72/272 (26%), Positives = 120/272 (44%), Gaps = 39/272 (14%)
Query: 361 GSVYRGKINGGFAAIKKVNGDVSK-----EIALLNKINHSNLIILSGVCFNEGNCYLVYE 415
G V + K AIK++ + + E+ L+++NH N++ L G C N LV E
Sbjct: 22 GVVCKAKWRAKDVAIKQIESESERKAFIVELRQLSRVNHPNIVKLYGACLNP--VCLVME 79
Query: 416 YAVNGTLSDWVFSNKNEGKYLDWKQRIQIALDVATGLNYLHSFTNPPHVHKDINSSNVLL 475
YA G+L + V Y + L + G+ YLHS +H+D+ N+LL
Sbjct: 80 YAEGGSLYN-VLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLL 138
Query: 476 DSDLRA-KIANFAMARPAEGQEGEFALTRHIVGTKG---YMAPEYLENGLVSTKLDVYAF 531
+ KI +F A + H+ KG +MAPE E S K DV+++
Sbjct: 139 VAGGTVLKICDFGTA---------CDIQTHMTNNKGSAAWMAPEVFEGSNYSEKCDVFSW 189
Query: 532 GVLILEMLTGKEAAALHAEENNMHLSDVLNAVLTKEDGEESLRHFIDPTLQGNYPLELAL 591
G+++ E++T ++ +E ++ AV + P L N P +
Sbjct: 190 GIILWEVITRRKP----FDEIGGPAFRIMWAV----------HNGTRPPLIKNLPKPIES 235
Query: 592 LVIRLIDACLKKDPTDRPTMYEIEHSLSNILN 623
L+ R C KDP+ RP+M EI +++++
Sbjct: 236 LMTR----CWSKDPSQRPSMEEIVKIMTHLMR 263
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 85.5 bits (210), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 74/272 (27%), Positives = 126/272 (46%), Gaps = 34/272 (12%)
Query: 361 GSVYRGKINGG-FAAIKKVN-GDVS-----KEIALLNKINHSNLIILSGVCFNEGNCYLV 413
G V+ G NG AIK + G +S +E ++ K+ H L+ L V +E Y+V
Sbjct: 29 GEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVV-SEEPIYIV 87
Query: 414 YEYAVNGTLSDWVFSNKNEGKYLDWKQRIQIALDVATGLNYLHSFTNPPHVHKDINSSNV 473
EY G+L D F GKYL Q + ++ +A+G+ Y+ +VH+D+ ++N+
Sbjct: 88 TEYMNKGSLLD--FLKGETGKYLRLPQLVDMSAQIASGMAYVERMN---YVHRDLRAANI 142
Query: 474 LLDSDLRAKIANFAMARPAEGQEGEFALTRHIVGTKGYMAPEYLENGLVSTKLDVYAFGV 533
L+ +L K+A+F +AR E + E+ + + APE G + K DV++FG+
Sbjct: 143 LVGENLVCKVADFGLARLIE--DNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGI 200
Query: 534 LILEMLTGKEAAALHAEENNMHLSDVLNAVLTKEDGEESLRHFIDPTLQGNYPLELALLV 593
L+ E+ T M +VL+ V R + P P E +
Sbjct: 201 LLTELTTKGRVPY-----PGMVNREVLDQV---------ERGYRMPC-----PPECPESL 241
Query: 594 IRLIDACLKKDPTDRPTMYEIEHSLSNILNAS 625
L+ C +K+P +RPT ++ L + ++
Sbjct: 242 HDLMCQCWRKEPEERPTFEYLQAFLEDYFTST 273
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 85.5 bits (210), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 74/272 (27%), Positives = 126/272 (46%), Gaps = 34/272 (12%)
Query: 361 GSVYRGKINGG-FAAIKKVN-GDVS-----KEIALLNKINHSNLIILSGVCFNEGNCYLV 413
G V+ G NG AIK + G +S +E ++ K+ H L+ L V +E Y+V
Sbjct: 29 GEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVV-SEEPIYIV 87
Query: 414 YEYAVNGTLSDWVFSNKNEGKYLDWKQRIQIALDVATGLNYLHSFTNPPHVHKDINSSNV 473
EY G+L D F GKYL Q + ++ +A+G+ Y+ +VH+D+ ++N+
Sbjct: 88 TEYMNKGSLLD--FLKGETGKYLRLPQLVDMSAQIASGMAYVERMN---YVHRDLRAANI 142
Query: 474 LLDSDLRAKIANFAMARPAEGQEGEFALTRHIVGTKGYMAPEYLENGLVSTKLDVYAFGV 533
L+ +L K+A+F +AR E + E+ + + APE G + K DV++FG+
Sbjct: 143 LVGENLVCKVADFGLARLIE--DNEWTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGI 200
Query: 534 LILEMLTGKEAAALHAEENNMHLSDVLNAVLTKEDGEESLRHFIDPTLQGNYPLELALLV 593
L+ E+ T M +VL+ V R + P P E +
Sbjct: 201 LLTELTTKGRVPY-----PGMVNREVLDQV---------ERGYRMPC-----PPECPESL 241
Query: 594 IRLIDACLKKDPTDRPTMYEIEHSLSNILNAS 625
L+ C +K+P +RPT ++ L + ++
Sbjct: 242 HDLMCQCWRKEPEERPTFEYLQAFLEDYFTST 273
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 66/233 (28%), Positives = 111/233 (47%), Gaps = 33/233 (14%)
Query: 383 SKEIALLNKINHSNLIILSGVCFNEGNCYLVYEYAVNGTLSDWVFSNKNEGKYLDWKQRI 442
+EI +L++ + + G + +++ EY G+ D + E LD Q
Sbjct: 73 QQEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLL-----EPGPLDETQIA 127
Query: 443 QIALDVATGLNYLHSFTNPPHVHKDINSSNVLLDSDLRAKIANFAMARPAEGQEGEFALT 502
I ++ GL+YLHS +H+DI ++NVLL K+A+F +A GQ + +
Sbjct: 128 TILREILKGLDYLHSEKK---IHRDIKAANVLLSEHGEVKLADFGVA----GQLTDTQIK 180
Query: 503 RH-IVGTKGYMAPEYLENGLVSTKLDVYAFGVLILEMLTGKEAAALHAEENNMHLSDVLN 561
R+ VGT +MAPE ++ +K D+++ G+ +E+ G+ H+E +H VL
Sbjct: 181 RNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPP---HSE---LHPMKVLF 234
Query: 562 AVLTKEDGEESLRHFIDPTLQGNYPLELALLVIRLIDACLKKDPTDRPTMYEI 614
+ PTL+GNY L ++ACL K+P+ RPT E+
Sbjct: 235 LIPKNN----------PPTLEGNYSKPLK----EFVEACLNKEPSFRPTAKEL 273
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 66/233 (28%), Positives = 111/233 (47%), Gaps = 33/233 (14%)
Query: 383 SKEIALLNKINHSNLIILSGVCFNEGNCYLVYEYAVNGTLSDWVFSNKNEGKYLDWKQRI 442
+EI +L++ + + G + +++ EY G+ D + E LD Q
Sbjct: 68 QQEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLL-----EPGPLDETQIA 122
Query: 443 QIALDVATGLNYLHSFTNPPHVHKDINSSNVLLDSDLRAKIANFAMARPAEGQEGEFALT 502
I ++ GL+YLHS +H+DI ++NVLL K+A+F +A GQ + +
Sbjct: 123 TILREILKGLDYLHSEKK---IHRDIKAANVLLSEHGEVKLADFGVA----GQLTDTQIK 175
Query: 503 RH-IVGTKGYMAPEYLENGLVSTKLDVYAFGVLILEMLTGKEAAALHAEENNMHLSDVLN 561
R+ VGT +MAPE ++ +K D+++ G+ +E+ G+ H+E +H VL
Sbjct: 176 RNXFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPP---HSE---LHPMKVLF 229
Query: 562 AVLTKEDGEESLRHFIDPTLQGNYPLELALLVIRLIDACLKKDPTDRPTMYEI 614
+ PTL+GNY L ++ACL K+P+ RPT E+
Sbjct: 230 LIPKNN----------PPTLEGNYSKPLK----EFVEACLNKEPSFRPTAKEL 268
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 66/233 (28%), Positives = 111/233 (47%), Gaps = 33/233 (14%)
Query: 383 SKEIALLNKINHSNLIILSGVCFNEGNCYLVYEYAVNGTLSDWVFSNKNEGKYLDWKQRI 442
+EI +L++ + + G + +++ EY G+ D + E LD Q
Sbjct: 53 QQEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLL-----EPGPLDETQIA 107
Query: 443 QIALDVATGLNYLHSFTNPPHVHKDINSSNVLLDSDLRAKIANFAMARPAEGQEGEFALT 502
I ++ GL+YLHS +H+DI ++NVLL K+A+F +A GQ + +
Sbjct: 108 TILREILKGLDYLHSEKK---IHRDIKAANVLLSEHGEVKLADFGVA----GQLTDTQIK 160
Query: 503 RH-IVGTKGYMAPEYLENGLVSTKLDVYAFGVLILEMLTGKEAAALHAEENNMHLSDVLN 561
R+ VGT +MAPE ++ +K D+++ G+ +E+ G+ H+E +H VL
Sbjct: 161 RNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPP---HSE---LHPMKVLF 214
Query: 562 AVLTKEDGEESLRHFIDPTLQGNYPLELALLVIRLIDACLKKDPTDRPTMYEI 614
+ PTL+GNY L ++ACL K+P+ RPT E+
Sbjct: 215 LIPKNN----------PPTLEGNYSKPLK----EFVEACLNKEPSFRPTAKEL 253
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 66/233 (28%), Positives = 111/233 (47%), Gaps = 33/233 (14%)
Query: 383 SKEIALLNKINHSNLIILSGVCFNEGNCYLVYEYAVNGTLSDWVFSNKNEGKYLDWKQRI 442
+EI +L++ + + G + +++ EY G+ D + E LD Q
Sbjct: 53 QQEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLL-----EPGPLDETQIA 107
Query: 443 QIALDVATGLNYLHSFTNPPHVHKDINSSNVLLDSDLRAKIANFAMARPAEGQEGEFALT 502
I ++ GL+YLHS +H+DI ++NVLL K+A+F +A GQ + +
Sbjct: 108 TILREILKGLDYLHSEKK---IHRDIKAANVLLSEHGEVKLADFGVA----GQLTDTQIK 160
Query: 503 RH-IVGTKGYMAPEYLENGLVSTKLDVYAFGVLILEMLTGKEAAALHAEENNMHLSDVLN 561
R+ VGT +MAPE ++ +K D+++ G+ +E+ G+ H+E +H VL
Sbjct: 161 RNXFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPP---HSE---LHPMKVLF 214
Query: 562 AVLTKEDGEESLRHFIDPTLQGNYPLELALLVIRLIDACLKKDPTDRPTMYEI 614
+ PTL+GNY L ++ACL K+P+ RPT E+
Sbjct: 215 LIPKNN----------PPTLEGNYSKPLK----EFVEACLNKEPSFRPTAKEL 253
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 74/265 (27%), Positives = 124/265 (46%), Gaps = 42/265 (15%)
Query: 361 GSVYRGKINGGF-AAIKKVN-GDVS-----KEIALLNKINHSNLIILSGVCFNEGNCYLV 413
G V GK G + A+K + G +S +E + K++H L+ GVC E Y+V
Sbjct: 22 GVVKLGKWKGQYDVAVKMIKEGSMSEDEFFQEAQTMMKLSHPKLVKFYGVCSKEYPIYIV 81
Query: 414 YEYAVNGTLSDWVFSNKNEGKYLDWKQRIQIALDVATGLNYLHSFTNPPHVHKDINSSNV 473
EY NG L +++ ++ GK L+ Q +++ DV G+ +L S +H+D+ + N
Sbjct: 82 TEYISNGCLLNYL---RSHGKGLEPSQLLEMCYDVCEGMAFLESHQ---FIHRDLAARNC 135
Query: 474 LLDSDLRAKIANFAMARPAEGQEGEFALTRHIVGTK---GYMAPEYLENGLVSTKLDVYA 530
L+D DL K+++F M R + ++ + VGTK + APE S+K DV+A
Sbjct: 136 LVDRDLCVKVSDFGMTRYV--LDDQYVSS---VGTKFPVKWSAPEVFHYFKYSSKSDVWA 190
Query: 531 FGVLILEMLT-GKEAAALHAEENNMHLSDVLNAVLTKEDGEESLRHFIDPTLQGNYPLEL 589
FG+L+ E+ + GK L+ VL G R P L +
Sbjct: 191 FGILMWEVFSLGKMPYDLYTNS---------EVVLKVSQGHRLYR----PHLASD----- 232
Query: 590 ALLVIRLIDACLKKDPTDRPTMYEI 614
+ +++ +C + P RPT ++
Sbjct: 233 --TIYQIMYSCWHELPEKRPTFQQL 255
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 47/163 (28%), Positives = 89/163 (54%), Gaps = 8/163 (4%)
Query: 380 GDVSKEIALLNKINHSNLIILSGVCFNEGN--CYLVYEYAVNGTLSDWVFSNKNEGKYLD 437
D+ KEI +L + H N++ G+C +G L+ E+ +G+L +++ NKN+ ++
Sbjct: 68 ADLKKEIEILRNLYHENIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNK---IN 124
Query: 438 WKQRIQIALDVATGLNYLHSFTNPPHVHKDINSSNVLLDSDLRAKIANFAMARPAEGQEG 497
KQ+++ A+ + G++YL S +VH+D+ + NVL++S+ + KI +F + + E +
Sbjct: 125 LKQQLKYAVQICKGMDYLGSRQ---YVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKE 181
Query: 498 EFALTRHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLILEMLT 540
+ + APE L DV++FGV + E+LT
Sbjct: 182 XXTVKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHELLT 224
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 82.8 bits (203), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 47/163 (28%), Positives = 89/163 (54%), Gaps = 8/163 (4%)
Query: 380 GDVSKEIALLNKINHSNLIILSGVCFNEGN--CYLVYEYAVNGTLSDWVFSNKNEGKYLD 437
D+ KEI +L + H N++ G+C +G L+ E+ +G+L +++ NKN+ ++
Sbjct: 56 ADLKKEIEILRNLYHENIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNK---IN 112
Query: 438 WKQRIQIALDVATGLNYLHSFTNPPHVHKDINSSNVLLDSDLRAKIANFAMARPAEGQEG 497
KQ+++ A+ + G++YL S +VH+D+ + NVL++S+ + KI +F + + E +
Sbjct: 113 LKQQLKYAVQICKGMDYLGSRQ---YVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKE 169
Query: 498 EFALTRHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLILEMLT 540
+ + APE L DV++FGV + E+LT
Sbjct: 170 XXTVKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHELLT 212
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 82.4 bits (202), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 77/275 (28%), Positives = 125/275 (45%), Gaps = 40/275 (14%)
Query: 361 GSVYRGKINGG-FAAIKKVN-GDVS-----KEIALLNKINHSNLIILSGVCFNEGNCYLV 413
G V+ G NG AIK + G +S +E ++ K+ H L+ L V +E +V
Sbjct: 22 GEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVV-SEEPIXIV 80
Query: 414 YEYAVNGTLSDWVFSNKNEGKYLDWKQRIQIALDVATGLNYLHSFTNPPHVHKDINSSNV 473
EY G+L D F GKYL Q + +A +A+G+ Y+ +VH+D+ ++N+
Sbjct: 81 TEYMSKGSLLD--FLKGETGKYLRLPQLVDMAAQIASGMAYVERMN---YVHRDLRAANI 135
Query: 474 LLDSDLRAKIANFAMARPAEGQEGEFALTRHIVGTK---GYMAPEYLENGLVSTKLDVYA 530
L+ +L K+A+F +AR E E R G K + APE G + K DV++
Sbjct: 136 LVGENLVCKVADFGLARLIEDNE---XTARQ--GAKFPIKWTAPEAALYGRFTIKSDVWS 190
Query: 531 FGVLILEMLTGKEAAALHAEENNMHLSDVLNAVLTKEDGEESLRHFIDPTLQGNYPLELA 590
FG+L+ E+ T M +VL+ V R + P P E
Sbjct: 191 FGILLTELTTKGRVPY-----PGMVNREVLDQV---------ERGYRMPC-----PPECP 231
Query: 591 LLVIRLIDACLKKDPTDRPTMYEIEHSLSNILNAS 625
+ L+ C +K+P +RPT ++ L + ++
Sbjct: 232 ESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTST 266
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 61/247 (24%), Positives = 121/247 (48%), Gaps = 25/247 (10%)
Query: 377 KVNGDVSKEIALLNKINHSNLIILSGVCFNEGNCYLVYEYAVNGTLSDWVFSNKNEGKYL 436
K D E +++ + +H N+I L GV ++ EY NG+L F KN+G++
Sbjct: 51 KQRRDFLSEASIMGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLD--AFLRKNDGRFT 108
Query: 437 DWKQRIQIALDVATGLNYLHSFTNPPHVHKDINSSNVLLDSDLRAKIANFAMARPAEGQE 496
Q + + + +G+ YL + +VH+D+ + N+L++S+L K+++F M+R E
Sbjct: 109 V-IQLVGMLRGIGSGMKYLSDMS---YVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDP 164
Query: 497 GEFALTRHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLILEMLTGKEAAALHAEENNMHL 556
TR + APE + ++ DV+++G+++ E+++ E +M
Sbjct: 165 EAAYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYW-----DMSN 219
Query: 557 SDVLNAVLTKEDGEESLRHFIDPTLQGNYPLELALLVIRLIDACLKKDPTDRPTMYEIEH 616
DV+ A+ EE R + P P++ + + +L+ C +K+ +DRP +I +
Sbjct: 220 QDVIKAI------EEGYR--LPP------PMDCPIALHQLMLDCWQKERSDRPKFGQIVN 265
Query: 617 SLSNILN 623
L ++
Sbjct: 266 MLDKLIR 272
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/247 (24%), Positives = 121/247 (48%), Gaps = 25/247 (10%)
Query: 377 KVNGDVSKEIALLNKINHSNLIILSGVCFNEGNCYLVYEYAVNGTLSDWVFSNKNEGKYL 436
K D E +++ + +H N+I L GV ++ EY NG+L F KN+G++
Sbjct: 57 KQRRDFLSEASIMGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLD--AFLRKNDGRFT 114
Query: 437 DWKQRIQIALDVATGLNYLHSFTNPPHVHKDINSSNVLLDSDLRAKIANFAMARPAEGQE 496
Q + + + +G+ YL + +VH+D+ + N+L++S+L K+++F M+R E
Sbjct: 115 V-IQLVGMLRGIGSGMKYLSDMS---YVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDP 170
Query: 497 GEFALTRHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLILEMLTGKEAAALHAEENNMHL 556
TR + APE + ++ DV+++G+++ E+++ E +M
Sbjct: 171 EAAYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYW-----DMSN 225
Query: 557 SDVLNAVLTKEDGEESLRHFIDPTLQGNYPLELALLVIRLIDACLKKDPTDRPTMYEIEH 616
DV+ A+ EE R + P P++ + + +L+ C +K+ +DRP +I +
Sbjct: 226 QDVIKAI------EEGYR--LPP------PMDCPIALHQLMLDCWQKERSDRPKFGQIVN 271
Query: 617 SLSNILN 623
L ++
Sbjct: 272 MLDKLIR 278
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/247 (24%), Positives = 120/247 (48%), Gaps = 25/247 (10%)
Query: 377 KVNGDVSKEIALLNKINHSNLIILSGVCFNEGNCYLVYEYAVNGTLSDWVFSNKNEGKYL 436
K D E +++ + +H N+I L GV ++ EY NG+L F KN+G++
Sbjct: 72 KQRRDFLSEASIMGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLD--AFLRKNDGRFT 129
Query: 437 DWKQRIQIALDVATGLNYLHSFTNPPHVHKDINSSNVLLDSDLRAKIANFAMARPAEGQE 496
Q + + + +G+ YL + VH+D+ + N+L++S+L K+++F M+R E
Sbjct: 130 V-IQLVGMLRGIGSGMKYLSDMS---AVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDP 185
Query: 497 GEFALTRHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLILEMLTGKEAAALHAEENNMHL 556
TR + APE + ++ DV+++G+++ E+++ E +M
Sbjct: 186 EAAYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYW-----DMSN 240
Query: 557 SDVLNAVLTKEDGEESLRHFIDPTLQGNYPLELALLVIRLIDACLKKDPTDRPTMYEIEH 616
DV+ A+ EE R + P P++ + + +L+ C +K+ +DRP +I +
Sbjct: 241 QDVIKAI------EEGYR--LPP------PMDCPIALHQLMLDCWQKERSDRPKFGQIVN 286
Query: 617 SLSNILN 623
L ++
Sbjct: 287 MLDKLIR 293
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 63/232 (27%), Positives = 107/232 (46%), Gaps = 33/232 (14%)
Query: 384 KEIALLNKINHSNLIILSGVCFNEGNCYLVYEYAVNGTLSDWVFSNKNEGKYLDWKQRIQ 443
+EI +L++ + S + G +++ EY G+ D + + D Q
Sbjct: 70 QEITVLSQCDSSYVTKYYGSYLKGSKLWIIMEYLGGGSALDLLRAGP-----FDEFQIAT 124
Query: 444 IALDVATGLNYLHSFTNPPHVHKDINSSNVLLDSDLRAKIANFAMARPAEGQEGEFALTR 503
+ ++ GL+YLHS +H+DI ++NVLL K+A+F +A GQ + + R
Sbjct: 125 MLKEILKGLDYLHS---EKKIHRDIKAANVLLSEQGDVKLADFGVA----GQLTDTQIKR 177
Query: 504 H-IVGTKGYMAPEYLENGLVSTKLDVYAFGVLILEMLTGKEAAALHAEENNMHLSDVLNA 562
+ VGT +MAPE ++ +K D+++ G+ +E+ G+ ++MH VL
Sbjct: 178 NTFVGTPFWMAPEVIQQSAYDSKADIWSLGITAIELAKGE------PPNSDMHPMRVLFL 231
Query: 563 VLTKEDGEESLRHFIDPTLQGNYPLELALLVIRLIDACLKKDPTDRPTMYEI 614
+ PTL G++ IDACL KDP+ RPT E+
Sbjct: 232 IPKNN----------PPTLVGDFTKSFK----EFIDACLNKDPSFRPTAKEL 269
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 77/277 (27%), Positives = 119/277 (42%), Gaps = 40/277 (14%)
Query: 365 RGKINGGFAAIKK---------VNGDVSKEIALLNKINHSNLIILSGVCFNEGNCYLVYE 415
R K G AIKK V +EI LL ++ H NL+ L VC + YLV+E
Sbjct: 45 RNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRHENLVNLLEVCKKKKRWYLVFE 104
Query: 416 YAVNGTLSDW-VFSNKNEGKYLDWKQRIQIALDVATGLNYLHSFTNPPHVHKDINSSNVL 474
+ + L D +F N LD++ + + G+ + HS +H+DI N+L
Sbjct: 105 FVDHTILDDLELFPNG-----LDYQVVQKYLFQIINGIGFCHSHNI---IHRDIKPENIL 156
Query: 475 LDSDLRAKIANFAMAR----PAEGQEGEFALTRHIVGTKGYMAPEYLENGLVSTK-LDVY 529
+ K+ +F AR P E + E V T+ Y APE L + K +DV+
Sbjct: 157 VSQSGVVKLCDFGFARTLAAPGEVYDDE-------VATRWYRAPELLVGDVKYGKAVDVW 209
Query: 530 AFGVLILEMLTGKEAAALHAEENNM-HLSDVLNAVLTKE----DGEESLRHFIDPTLQGN 584
A G L+ EM G+ ++ + + H+ L ++ + + P ++
Sbjct: 210 AIGCLVTEMFMGEPLFPGDSDIDQLYHIMMCLGNLIPRHQELFNKNPVFAGVRLPEIKER 269
Query: 585 YPLE-----LALLVIRLIDACLKKDPTDRPTMYEIEH 616
PLE L+ +VI L CL DP RP E+ H
Sbjct: 270 EPLERRYPKLSEVVIDLAKKCLHIDPDKRPFCAELLH 306
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 63/197 (31%), Positives = 102/197 (51%), Gaps = 25/197 (12%)
Query: 361 GSVYRGKI--NGG---FAAIKKVN-----GDVSK---EIALLNKINHSNLIILSGVCF-N 406
G VY G + N G A+K +N G+VS+ E ++ +H N++ L G+C +
Sbjct: 63 GCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRS 122
Query: 407 EGNCYLVYEYAVNGTLSDWVFSNKNEGKYLDWKQRIQIALDVATGLNYLHSFTNPPHVHK 466
EG+ +V Y +G L +++ +NE K I L VA G+ YL S VH+
Sbjct: 123 EGSPLVVLPYMKHGDLRNFI---RNETHNPTVKDLIGFGLQVAKGMKYLAS---KKFVHR 176
Query: 467 DINSSNVLLDSDLRAKIANFAMARPAEGQEGEFALTRHIVGTK---GYMAPEYLENGLVS 523
D+ + N +LD K+A+F +AR + + E+ + G K +MA E L+ +
Sbjct: 177 DLAARNCMLDEKFTVKVADFGLAR--DMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFT 234
Query: 524 TKLDVYAFGVLILEMLT 540
TK DV++FGVL+ E++T
Sbjct: 235 TKSDVWSFGVLLWELMT 251
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 63/197 (31%), Positives = 102/197 (51%), Gaps = 25/197 (12%)
Query: 361 GSVYRGKI--NGG---FAAIKKVN-----GDVSK---EIALLNKINHSNLIILSGVCF-N 406
G VY G + N G A+K +N G+VS+ E ++ +H N++ L G+C +
Sbjct: 103 GCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRS 162
Query: 407 EGNCYLVYEYAVNGTLSDWVFSNKNEGKYLDWKQRIQIALDVATGLNYLHSFTNPPHVHK 466
EG+ +V Y +G L +++ +NE K I L VA G+ +L S VH+
Sbjct: 163 EGSPLVVLPYMKHGDLRNFI---RNETHNPTVKDLIGFGLQVAKGMKFLAS---KKFVHR 216
Query: 467 DINSSNVLLDSDLRAKIANFAMARPAEGQEGEFALTRHIVGTK---GYMAPEYLENGLVS 523
D+ + N +LD K+A+F +AR + + EF + G K +MA E L+ +
Sbjct: 217 DLAARNCMLDEKFTVKVADFGLAR--DMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFT 274
Query: 524 TKLDVYAFGVLILEMLT 540
TK DV++FGVL+ E++T
Sbjct: 275 TKSDVWSFGVLLWELMT 291
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 63/197 (31%), Positives = 102/197 (51%), Gaps = 25/197 (12%)
Query: 361 GSVYRGKI--NGG---FAAIKKVN-----GDVSK---EIALLNKINHSNLIILSGVCF-N 406
G VY G + N G A+K +N G+VS+ E ++ +H N++ L G+C +
Sbjct: 62 GCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRS 121
Query: 407 EGNCYLVYEYAVNGTLSDWVFSNKNEGKYLDWKQRIQIALDVATGLNYLHSFTNPPHVHK 466
EG+ +V Y +G L +++ +NE K I L VA G+ YL S VH+
Sbjct: 122 EGSPLVVLPYMKHGDLRNFI---RNETHNPTVKDLIGFGLQVAKGMKYLAS---KKFVHR 175
Query: 467 DINSSNVLLDSDLRAKIANFAMARPAEGQEGEFALTRHIVGTK---GYMAPEYLENGLVS 523
D+ + N +LD K+A+F +AR + + E+ + G K +MA E L+ +
Sbjct: 176 DLAARNCMLDEKFTVKVADFGLAR--DMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFT 233
Query: 524 TKLDVYAFGVLILEMLT 540
TK DV++FGVL+ E++T
Sbjct: 234 TKSDVWSFGVLLWELMT 250
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 63/197 (31%), Positives = 102/197 (51%), Gaps = 25/197 (12%)
Query: 361 GSVYRGKI--NGG---FAAIKKVN-----GDVSK---EIALLNKINHSNLIILSGVCF-N 406
G VY G + N G A+K +N G+VS+ E ++ +H N++ L G+C +
Sbjct: 44 GCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRS 103
Query: 407 EGNCYLVYEYAVNGTLSDWVFSNKNEGKYLDWKQRIQIALDVATGLNYLHSFTNPPHVHK 466
EG+ +V Y +G L +++ +NE K I L VA G+ YL S VH+
Sbjct: 104 EGSPLVVLPYMKHGDLRNFI---RNETHNPTVKDLIGFGLQVAKGMKYLAS---KKFVHR 157
Query: 467 DINSSNVLLDSDLRAKIANFAMARPAEGQEGEFALTRHIVGTK---GYMAPEYLENGLVS 523
D+ + N +LD K+A+F +AR + + E+ + G K +MA E L+ +
Sbjct: 158 DLAARNCMLDEKFTVKVADFGLAR--DMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFT 215
Query: 524 TKLDVYAFGVLILEMLT 540
TK DV++FGVL+ E++T
Sbjct: 216 TKSDVWSFGVLLWELMT 232
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 56/184 (30%), Positives = 89/184 (48%), Gaps = 17/184 (9%)
Query: 361 GSVYRGKINGGFAAIKKVNGDVSK-----EIALLNKINHSNLIILSGVCFNE-GNCYLVY 414
G V G G A+K + D + E +++ ++ HSNL+ L GV E G Y+V
Sbjct: 26 GDVMLGDYRGNKVAVKCIKNDATAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVT 85
Query: 415 EYAVNGTLSDWVFSNKNEGKYLDWKQRIQIALDVATGLNYLHSFTNPPHVHKDINSSNVL 474
EY G+L D++ S L ++ +LDV + YL VH+D+ + NVL
Sbjct: 86 EYMAKGSLVDYLRSRGRS--VLGGDCLLKFSLDVCEAMEYLEGNN---FVHRDLAARNVL 140
Query: 475 LDSDLRAKIANFAMARPAEGQEGEFALTRHIVGTKGYMAPEYLENGLVSTKLDVYAFGVL 534
+ D AK+++F + + A + L + APE L STK DV++FG+L
Sbjct: 141 VSEDNVAKVSDFGLTKEASSTQDTGKLPVK------WTAPEALREAAFSTKSDVWSFGIL 194
Query: 535 ILEM 538
+ E+
Sbjct: 195 LWEI 198
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 63/197 (31%), Positives = 102/197 (51%), Gaps = 25/197 (12%)
Query: 361 GSVYRGKI--NGG---FAAIKKVN-----GDVSK---EIALLNKINHSNLIILSGVCF-N 406
G VY G + N G A+K +N G+VS+ E ++ +H N++ L G+C +
Sbjct: 36 GCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRS 95
Query: 407 EGNCYLVYEYAVNGTLSDWVFSNKNEGKYLDWKQRIQIALDVATGLNYLHSFTNPPHVHK 466
EG+ +V Y +G L +++ +NE K I L VA G+ YL S VH+
Sbjct: 96 EGSPLVVLPYMKHGDLRNFI---RNETHNPTVKDLIGFGLQVAKGMKYLAS---KKFVHR 149
Query: 467 DINSSNVLLDSDLRAKIANFAMARPAEGQEGEFALTRHIVGTK---GYMAPEYLENGLVS 523
D+ + N +LD K+A+F +AR + + E+ + G K +MA E L+ +
Sbjct: 150 DLAARNCMLDEKFTVKVADFGLAR--DMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFT 207
Query: 524 TKLDVYAFGVLILEMLT 540
TK DV++FGVL+ E++T
Sbjct: 208 TKSDVWSFGVLLWELMT 224
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 63/197 (31%), Positives = 102/197 (51%), Gaps = 25/197 (12%)
Query: 361 GSVYRGKI--NGG---FAAIKKVN-----GDVSK---EIALLNKINHSNLIILSGVCF-N 406
G VY G + N G A+K +N G+VS+ E ++ +H N++ L G+C +
Sbjct: 42 GCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRS 101
Query: 407 EGNCYLVYEYAVNGTLSDWVFSNKNEGKYLDWKQRIQIALDVATGLNYLHSFTNPPHVHK 466
EG+ +V Y +G L +++ +NE K I L VA G+ YL S VH+
Sbjct: 102 EGSPLVVLPYMKHGDLRNFI---RNETHNPTVKDLIGFGLQVAKGMKYLAS---KKFVHR 155
Query: 467 DINSSNVLLDSDLRAKIANFAMARPAEGQEGEFALTRHIVGTK---GYMAPEYLENGLVS 523
D+ + N +LD K+A+F +AR + + E+ + G K +MA E L+ +
Sbjct: 156 DLAARNCMLDEKFTVKVADFGLAR--DMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFT 213
Query: 524 TKLDVYAFGVLILEMLT 540
TK DV++FGVL+ E++T
Sbjct: 214 TKSDVWSFGVLLWELMT 230
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 63/197 (31%), Positives = 102/197 (51%), Gaps = 25/197 (12%)
Query: 361 GSVYRGKI--NGG---FAAIKKVN-----GDVSK---EIALLNKINHSNLIILSGVCF-N 406
G VY G + N G A+K +N G+VS+ E ++ +H N++ L G+C +
Sbjct: 41 GCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRS 100
Query: 407 EGNCYLVYEYAVNGTLSDWVFSNKNEGKYLDWKQRIQIALDVATGLNYLHSFTNPPHVHK 466
EG+ +V Y +G L +++ +NE K I L VA G+ YL S VH+
Sbjct: 101 EGSPLVVLPYMKHGDLRNFI---RNETHNPTVKDLIGFGLQVAKGMKYLAS---KKFVHR 154
Query: 467 DINSSNVLLDSDLRAKIANFAMARPAEGQEGEFALTRHIVGTK---GYMAPEYLENGLVS 523
D+ + N +LD K+A+F +AR + + E+ + G K +MA E L+ +
Sbjct: 155 DLAARNCMLDEKFTVKVADFGLAR--DMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFT 212
Query: 524 TKLDVYAFGVLILEMLT 540
TK DV++FGVL+ E++T
Sbjct: 213 TKSDVWSFGVLLWELMT 229
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 63/197 (31%), Positives = 102/197 (51%), Gaps = 25/197 (12%)
Query: 361 GSVYRGKI--NGG---FAAIKKVN-----GDVSK---EIALLNKINHSNLIILSGVCF-N 406
G VY G + N G A+K +N G+VS+ E ++ +H N++ L G+C +
Sbjct: 39 GCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRS 98
Query: 407 EGNCYLVYEYAVNGTLSDWVFSNKNEGKYLDWKQRIQIALDVATGLNYLHSFTNPPHVHK 466
EG+ +V Y +G L +++ +NE K I L VA G+ YL S VH+
Sbjct: 99 EGSPLVVLPYMKHGDLRNFI---RNETHNPTVKDLIGFGLQVAKGMKYLAS---KKFVHR 152
Query: 467 DINSSNVLLDSDLRAKIANFAMARPAEGQEGEFALTRHIVGTK---GYMAPEYLENGLVS 523
D+ + N +LD K+A+F +AR + + E+ + G K +MA E L+ +
Sbjct: 153 DLAARNCMLDEKFTVKVADFGLAR--DMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFT 210
Query: 524 TKLDVYAFGVLILEMLT 540
TK DV++FGVL+ E++T
Sbjct: 211 TKSDVWSFGVLLWELMT 227
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 63/197 (31%), Positives = 102/197 (51%), Gaps = 25/197 (12%)
Query: 361 GSVYRGKI--NGG---FAAIKKVN-----GDVSK---EIALLNKINHSNLIILSGVCF-N 406
G VY G + N G A+K +N G+VS+ E ++ +H N++ L G+C +
Sbjct: 44 GCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRS 103
Query: 407 EGNCYLVYEYAVNGTLSDWVFSNKNEGKYLDWKQRIQIALDVATGLNYLHSFTNPPHVHK 466
EG+ +V Y +G L +++ +NE K I L VA G+ YL S VH+
Sbjct: 104 EGSPLVVLPYMKHGDLRNFI---RNETHNPTVKDLIGFGLQVAKGMKYLAS---KKFVHR 157
Query: 467 DINSSNVLLDSDLRAKIANFAMARPAEGQEGEFALTRHIVGTK---GYMAPEYLENGLVS 523
D+ + N +LD K+A+F +AR + + E+ + G K +MA E L+ +
Sbjct: 158 DLAARNCMLDEKFTVKVADFGLAR--DMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFT 215
Query: 524 TKLDVYAFGVLILEMLT 540
TK DV++FGVL+ E++T
Sbjct: 216 TKSDVWSFGVLLWELMT 232
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 63/197 (31%), Positives = 102/197 (51%), Gaps = 25/197 (12%)
Query: 361 GSVYRGKI--NGG---FAAIKKVN-----GDVSK---EIALLNKINHSNLIILSGVCF-N 406
G VY G + N G A+K +N G+VS+ E ++ +H N++ L G+C +
Sbjct: 43 GCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRS 102
Query: 407 EGNCYLVYEYAVNGTLSDWVFSNKNEGKYLDWKQRIQIALDVATGLNYLHSFTNPPHVHK 466
EG+ +V Y +G L +++ +NE K I L VA G+ YL S VH+
Sbjct: 103 EGSPLVVLPYMKHGDLRNFI---RNETHNPTVKDLIGFGLQVAKGMKYLAS---KKFVHR 156
Query: 467 DINSSNVLLDSDLRAKIANFAMARPAEGQEGEFALTRHIVGTK---GYMAPEYLENGLVS 523
D+ + N +LD K+A+F +AR + + E+ + G K +MA E L+ +
Sbjct: 157 DLAARNCMLDEKFTVKVADFGLAR--DMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFT 214
Query: 524 TKLDVYAFGVLILEMLT 540
TK DV++FGVL+ E++T
Sbjct: 215 TKSDVWSFGVLLWELMT 231
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 63/197 (31%), Positives = 102/197 (51%), Gaps = 25/197 (12%)
Query: 361 GSVYRGKI--NGG---FAAIKKVN-----GDVSK---EIALLNKINHSNLIILSGVCF-N 406
G VY G + N G A+K +N G+VS+ E ++ +H N++ L G+C +
Sbjct: 44 GCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRS 103
Query: 407 EGNCYLVYEYAVNGTLSDWVFSNKNEGKYLDWKQRIQIALDVATGLNYLHSFTNPPHVHK 466
EG+ +V Y +G L +++ +NE K I L VA G+ +L S VH+
Sbjct: 104 EGSPLVVLPYMKHGDLRNFI---RNETHNPTVKDLIGFGLQVAKGMKFLAS---KKFVHR 157
Query: 467 DINSSNVLLDSDLRAKIANFAMARPAEGQEGEFALTRHIVGTK---GYMAPEYLENGLVS 523
D+ + N +LD K+A+F +AR + + EF + G K +MA E L+ +
Sbjct: 158 DLAARNCMLDEKFTVKVADFGLAR--DMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFT 215
Query: 524 TKLDVYAFGVLILEMLT 540
TK DV++FGVL+ E++T
Sbjct: 216 TKSDVWSFGVLLWELMT 232
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 63/197 (31%), Positives = 102/197 (51%), Gaps = 25/197 (12%)
Query: 361 GSVYRGKI--NGG---FAAIKKVN-----GDVSK---EIALLNKINHSNLIILSGVCF-N 406
G VY G + N G A+K +N G+VS+ E ++ +H N++ L G+C +
Sbjct: 44 GCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRS 103
Query: 407 EGNCYLVYEYAVNGTLSDWVFSNKNEGKYLDWKQRIQIALDVATGLNYLHSFTNPPHVHK 466
EG+ +V Y +G L +++ +NE K I L VA G+ +L S VH+
Sbjct: 104 EGSPLVVLPYMKHGDLRNFI---RNETHNPTVKDLIGFGLQVAKGMKFLAS---KKFVHR 157
Query: 467 DINSSNVLLDSDLRAKIANFAMARPAEGQEGEFALTRHIVGTK---GYMAPEYLENGLVS 523
D+ + N +LD K+A+F +AR + + EF + G K +MA E L+ +
Sbjct: 158 DLAARNCMLDEKFTVKVADFGLAR--DMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFT 215
Query: 524 TKLDVYAFGVLILEMLT 540
TK DV++FGVL+ E++T
Sbjct: 216 TKSDVWSFGVLLWELMT 232
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 63/197 (31%), Positives = 102/197 (51%), Gaps = 25/197 (12%)
Query: 361 GSVYRGKI--NGG---FAAIKKVN-----GDVSK---EIALLNKINHSNLIILSGVCF-N 406
G VY G + N G A+K +N G+VS+ E ++ +H N++ L G+C +
Sbjct: 49 GCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRS 108
Query: 407 EGNCYLVYEYAVNGTLSDWVFSNKNEGKYLDWKQRIQIALDVATGLNYLHSFTNPPHVHK 466
EG+ +V Y +G L +++ +NE K I L VA G+ +L S VH+
Sbjct: 109 EGSPLVVLPYMKHGDLRNFI---RNETHNPTVKDLIGFGLQVAKGMKFLAS---KKFVHR 162
Query: 467 DINSSNVLLDSDLRAKIANFAMARPAEGQEGEFALTRHIVGTK---GYMAPEYLENGLVS 523
D+ + N +LD K+A+F +AR + + EF + G K +MA E L+ +
Sbjct: 163 DLAARNCMLDEKFTVKVADFGLAR--DMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFT 220
Query: 524 TKLDVYAFGVLILEMLT 540
TK DV++FGVL+ E++T
Sbjct: 221 TKSDVWSFGVLLWELMT 237
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 63/197 (31%), Positives = 102/197 (51%), Gaps = 25/197 (12%)
Query: 361 GSVYRGKI--NGG---FAAIKKVN-----GDVSK---EIALLNKINHSNLIILSGVCF-N 406
G VY G + N G A+K +N G+VS+ E ++ +H N++ L G+C +
Sbjct: 45 GCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRS 104
Query: 407 EGNCYLVYEYAVNGTLSDWVFSNKNEGKYLDWKQRIQIALDVATGLNYLHSFTNPPHVHK 466
EG+ +V Y +G L +++ +NE K I L VA G+ +L S VH+
Sbjct: 105 EGSPLVVLPYMKHGDLRNFI---RNETHNPTVKDLIGFGLQVAKGMKFLAS---KKFVHR 158
Query: 467 DINSSNVLLDSDLRAKIANFAMARPAEGQEGEFALTRHIVGTK---GYMAPEYLENGLVS 523
D+ + N +LD K+A+F +AR + + EF + G K +MA E L+ +
Sbjct: 159 DLAARNCMLDEKFTVKVADFGLAR--DMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFT 216
Query: 524 TKLDVYAFGVLILEMLT 540
TK DV++FGVL+ E++T
Sbjct: 217 TKSDVWSFGVLLWELMT 233
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 79.3 bits (194), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 63/197 (31%), Positives = 102/197 (51%), Gaps = 25/197 (12%)
Query: 361 GSVYRGKI--NGG---FAAIKKVN-----GDVSK---EIALLNKINHSNLIILSGVCF-N 406
G VY G + N G A+K +N G+VS+ E ++ +H N++ L G+C +
Sbjct: 42 GCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRS 101
Query: 407 EGNCYLVYEYAVNGTLSDWVFSNKNEGKYLDWKQRIQIALDVATGLNYLHSFTNPPHVHK 466
EG+ +V Y +G L +++ +NE K I L VA G+ +L S VH+
Sbjct: 102 EGSPLVVLPYMKHGDLRNFI---RNETHNPTVKDLIGFGLQVAKGMKFLAS---KKFVHR 155
Query: 467 DINSSNVLLDSDLRAKIANFAMARPAEGQEGEFALTRHIVGTK---GYMAPEYLENGLVS 523
D+ + N +LD K+A+F +AR + + EF + G K +MA E L+ +
Sbjct: 156 DLAARNCMLDEKFTVKVADFGLAR--DMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFT 213
Query: 524 TKLDVYAFGVLILEMLT 540
TK DV++FGVL+ E++T
Sbjct: 214 TKSDVWSFGVLLWELMT 230
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 79.0 bits (193), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 63/197 (31%), Positives = 102/197 (51%), Gaps = 25/197 (12%)
Query: 361 GSVYRGKI--NGG---FAAIKKVN-----GDVSK---EIALLNKINHSNLIILSGVCF-N 406
G VY G + N G A+K +N G+VS+ E ++ +H N++ L G+C +
Sbjct: 45 GCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRS 104
Query: 407 EGNCYLVYEYAVNGTLSDWVFSNKNEGKYLDWKQRIQIALDVATGLNYLHSFTNPPHVHK 466
EG+ +V Y +G L +++ +NE K I L VA G+ +L S VH+
Sbjct: 105 EGSPLVVLPYMKHGDLRNFI---RNETHNPTVKDLIGFGLQVAKGMKFLAS---KKFVHR 158
Query: 467 DINSSNVLLDSDLRAKIANFAMARPAEGQEGEFALTRHIVGTK---GYMAPEYLENGLVS 523
D+ + N +LD K+A+F +AR + + EF + G K +MA E L+ +
Sbjct: 159 DLAARNCMLDEKFTVKVADFGLAR--DMLDKEFDSVHNKTGAKLPVKWMALESLQTQKFT 216
Query: 524 TKLDVYAFGVLILEMLT 540
TK DV++FGVL+ E++T
Sbjct: 217 TKSDVWSFGVLLWELMT 233
>pdb|2QLU|A Chain A, Crystal Structure Of Activin Receptor Type Ii Kinase
Domain From Human
Length = 314
Score = 79.0 bits (193), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 75/299 (25%), Positives = 137/299 (45%), Gaps = 46/299 (15%)
Query: 361 GSVYRGKINGGFAAIK------KVNGDVSKEIALLNKINHSNLIILSGVCFNEGNC---- 410
G V++ ++ F A+K K + +EI + H NL+ N
Sbjct: 29 GCVWKAQLMNDFVAVKIFPLQDKQSWQSEREIFSTPGMKHENLLQFIAAEKRGSNLEVEL 88
Query: 411 YLVYEYAVNGTLSDWVFSNKNEGKYLDWKQRIQIALDVATGLNYLHSFT--------NPP 462
+L+ + G+L+D++ +G + W + +A ++ GL+YLH P
Sbjct: 89 WLITAFHDKGSLTDYL-----KGNIITWNELCHVAETMSRGLSYLHEDVPWCRGEGHKPS 143
Query: 463 HVHKDINSSNVLLDSDLRAKIANFAMA------RPAEGQEGEFALTRHIVGTKGYMAPEY 516
H+D S NVLL SDL A +A+F +A +P G+ VGT+ YMAPE
Sbjct: 144 IAHRDFKSKNVLLKSDLTAVLADFGLAVRFEPGKPPGDTHGQ-------VGTRRYMAPEV 196
Query: 517 LENGL-----VSTKLDVYAFGVLILEMLTGKEAAALHAEENNMHLSDVLNAVLTKEDGEE 571
LE + ++D+YA G+++ E+++ +AA +E + + + + E+ +E
Sbjct: 197 LEGAINFQRDAFLRIDMYAMGLVLWELVSRCKAADGPVDEYMLPFEEEIGQHPSLEELQE 256
Query: 572 SLRH-FIDPTLQGNYPLE--LALLVIRLIDACLKKDPTDRPTMYEIEHSLSNILNASLN 627
+ H + PT++ ++ LA L + I+ C D R + +E +S ++ S+N
Sbjct: 257 VVVHKKMRPTIKDHWLKHPGLAQLCV-TIEECWDHDAEARLSAGCVEERVS-LIRRSVN 313
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 79.0 bits (193), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 56/186 (30%), Positives = 90/186 (48%), Gaps = 17/186 (9%)
Query: 361 GSVYRGKINGGFAAIKKVNGDVSK-----EIALLNKINHSNLIILSGVCFNE-GNCYLVY 414
G V G G A+K + D + E +++ ++ HSNL+ L GV E G Y+V
Sbjct: 207 GDVMLGDYRGNKVAVKCIKNDATAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVT 266
Query: 415 EYAVNGTLSDWVFSNKNEGKYLDWKQRIQIALDVATGLNYLHSFTNPPHVHKDINSSNVL 474
EY G+L D++ S L ++ +LDV + YL VH+D+ + NVL
Sbjct: 267 EYMAKGSLVDYLRSRGRS--VLGGDCLLKFSLDVCEAMEYLEGNN---FVHRDLAARNVL 321
Query: 475 LDSDLRAKIANFAMARPAEGQEGEFALTRHIVGTKGYMAPEYLENGLVSTKLDVYAFGVL 534
+ D AK+++F + + A + L + APE L STK DV++FG+L
Sbjct: 322 VSEDNVAKVSDFGLTKEASSTQDTGKLPVK------WTAPEALREKKFSTKSDVWSFGIL 375
Query: 535 ILEMLT 540
+ E+ +
Sbjct: 376 LWEIYS 381
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 79.0 bits (193), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 56/194 (28%), Positives = 99/194 (51%), Gaps = 18/194 (9%)
Query: 361 GSVYRG--KINGGFAAIKKVN-----GDVSKEIALLNKINHSNLIILSGVCFNEGNCYLV 413
GSVY+ K G AIK+V ++ KEI+++ + + +++ G F + ++V
Sbjct: 43 GSVYKAIHKETGQIVAIKQVPVESDLQEIIKEISIMQQCDSPHVVKYYGSYFKNTDLWIV 102
Query: 414 YEYAVNGTLSDWVFSNKNEGKYLDWKQRIQIALDVATGLNYLHSFTNPPHVHKDINSSNV 473
EY G++SD + + K L + I GL YLH +H+DI + N+
Sbjct: 103 MEYCGAGSVSDII---RLRNKTLTEDEIATILQSTLKGLEYLHFMRK---IHRDIKAGNI 156
Query: 474 LLDSDLRAKIANFAMARPAEGQEGEFALTRH-IVGTKGYMAPEYLENGLVSTKLDVYAFG 532
LL+++ AK+A+F +A GQ + R+ ++GT +MAPE ++ + D+++ G
Sbjct: 157 LLNTEGHAKLADFGVA----GQLTDXMAKRNXVIGTPFWMAPEVIQEIGYNCVADIWSLG 212
Query: 533 VLILEMLTGKEAAA 546
+ +EM GK A
Sbjct: 213 ITAIEMAEGKPPYA 226
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 73/272 (26%), Positives = 122/272 (44%), Gaps = 34/272 (12%)
Query: 361 GSVYRGKINGGF-AAIKKVN-GDVSK-----EIALLNKINHSNLIILSGVCFNEGNCYLV 413
G V+ G NG A+K + G +S E L+ ++ H L+ L V E Y++
Sbjct: 37 GEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQE-PIYII 95
Query: 414 YEYAVNGTLSDWVFSNKNEGKYLDWKQRIQIALDVATGLNYLHSFTNPPHVHKDINSSNV 473
EY NG+L D F G L + + +A +A G+ ++ ++H+D+ ++N+
Sbjct: 96 TEYMENGSLVD--FLKTPSGIKLTINKLLDMAAQIAEGMAFIEERN---YIHRDLRAANI 150
Query: 474 LLDSDLRAKIANFAMARPAEGQEGEFALTRHIVGTKGYMAPEYLENGLVSTKLDVYAFGV 533
L+ L KIA+F +AR E + E+ + APE + G + K DV++FG+
Sbjct: 151 LVSDTLSCKIADFGLARLIE--DNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGI 208
Query: 534 LILEMLTGKEAAALHAEENNMHLSDVLNAVLTKEDGEESLRHFIDPTLQGNYPLELALLV 593
L+ E++T M +V+ + E G +R N P EL
Sbjct: 209 LLTEIVTHGRIPY-----PGMTNPEVIQNL---ERGYRMVR-------PDNCPEEL---- 249
Query: 594 IRLIDACLKKDPTDRPTMYEIEHSLSNILNAS 625
+L+ C K+ P DRPT + L + A+
Sbjct: 250 YQLMRLCWKERPEDRPTFDYLRSVLEDFFTAT 281
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 63/197 (31%), Positives = 101/197 (51%), Gaps = 25/197 (12%)
Query: 361 GSVYRGKI--NGG---FAAIKKVN-----GDVSK---EIALLNKINHSNLIILSGVCF-N 406
G VY G + N G A+K +N G+VS+ E ++ +H N++ L G+C +
Sbjct: 43 GCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRS 102
Query: 407 EGNCYLVYEYAVNGTLSDWVFSNKNEGKYLDWKQRIQIALDVATGLNYLHSFTNPPHVHK 466
EG+ +V Y +G L +++ +NE K I L VA G+ YL S VH+
Sbjct: 103 EGSPLVVLPYMKHGDLRNFI---RNETHNPTVKDLIGFGLQVAKGMKYLAS---KKFVHR 156
Query: 467 DINSSNVLLDSDLRAKIANFAMARPAEGQEGEFALTRHIVGTK---GYMAPEYLENGLVS 523
D+ + N +LD K+A+F +AR + + E + G K +MA E L+ +
Sbjct: 157 DLAARNCMLDEKFTVKVADFGLAR--DMYDKEXXSVHNKTGAKLPVKWMALESLQTQKFT 214
Query: 524 TKLDVYAFGVLILEMLT 540
TK DV++FGVL+ E++T
Sbjct: 215 TKSDVWSFGVLLWELMT 231
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 73/272 (26%), Positives = 122/272 (44%), Gaps = 34/272 (12%)
Query: 361 GSVYRGKINGGF-AAIKKVN-GDVS-----KEIALLNKINHSNLIILSGVCFNEGNCYLV 413
G V+ G NG A+K + G +S E L+ ++ H L+ L V E Y++
Sbjct: 33 GEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQEP-IYII 91
Query: 414 YEYAVNGTLSDWVFSNKNEGKYLDWKQRIQIALDVATGLNYLHSFTNPPHVHKDINSSNV 473
EY NG+L D F G L + + +A +A G+ ++ ++H+D+ ++N+
Sbjct: 92 TEYMENGSLVD--FLKTPSGIKLTINKLLDMAAQIAEGMAFIEERN---YIHRDLRAANI 146
Query: 474 LLDSDLRAKIANFAMARPAEGQEGEFALTRHIVGTKGYMAPEYLENGLVSTKLDVYAFGV 533
L+ L KIA+F +AR E + E+ + APE + G + K DV++FG+
Sbjct: 147 LVSDTLSCKIADFGLARLIE--DNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGI 204
Query: 534 LILEMLTGKEAAALHAEENNMHLSDVLNAVLTKEDGEESLRHFIDPTLQGNYPLELALLV 593
L+ E++T M +V+ + E G +R N P EL
Sbjct: 205 LLTEIVTHGRIPY-----PGMTNPEVIQNL---ERGYRMVR-------PDNCPEEL---- 245
Query: 594 IRLIDACLKKDPTDRPTMYEIEHSLSNILNAS 625
+L+ C K+ P DRPT + L + A+
Sbjct: 246 YQLMRLCWKERPEDRPTFDYLRSVLEDFFTAT 277
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 56/184 (30%), Positives = 89/184 (48%), Gaps = 17/184 (9%)
Query: 361 GSVYRGKINGGFAAIKKVNGDVSK-----EIALLNKINHSNLIILSGVCFNE-GNCYLVY 414
G V G G A+K + D + E +++ ++ HSNL+ L GV E G Y+V
Sbjct: 35 GDVMLGDYRGNKVAVKCIKNDATAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVT 94
Query: 415 EYAVNGTLSDWVFSNKNEGKYLDWKQRIQIALDVATGLNYLHSFTNPPHVHKDINSSNVL 474
EY G+L D++ S L ++ +LDV + YL VH+D+ + NVL
Sbjct: 95 EYMAKGSLVDYLRSRGRS--VLGGDCLLKFSLDVCEAMEYLEGNN---FVHRDLAARNVL 149
Query: 475 LDSDLRAKIANFAMARPAEGQEGEFALTRHIVGTKGYMAPEYLENGLVSTKLDVYAFGVL 534
+ D AK+++F + + A + L + APE L STK DV++FG+L
Sbjct: 150 VSEDNVAKVSDFGLTKEASSTQDTGKLPVK------WTAPEALREKKFSTKSDVWSFGIL 203
Query: 535 ILEM 538
+ E+
Sbjct: 204 LWEI 207
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 56/184 (30%), Positives = 89/184 (48%), Gaps = 17/184 (9%)
Query: 361 GSVYRGKINGGFAAIKKVNGDVSK-----EIALLNKINHSNLIILSGVCFNE-GNCYLVY 414
G V G G A+K + D + E +++ ++ HSNL+ L GV E G Y+V
Sbjct: 20 GDVMLGDYRGNKVAVKCIKNDATAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVT 79
Query: 415 EYAVNGTLSDWVFSNKNEGKYLDWKQRIQIALDVATGLNYLHSFTNPPHVHKDINSSNVL 474
EY G+L D++ S L ++ +LDV + YL VH+D+ + NVL
Sbjct: 80 EYMAKGSLVDYLRSRGRS--VLGGDCLLKFSLDVCEAMEYLEGNN---FVHRDLAARNVL 134
Query: 475 LDSDLRAKIANFAMARPAEGQEGEFALTRHIVGTKGYMAPEYLENGLVSTKLDVYAFGVL 534
+ D AK+++F + + A + L + APE L STK DV++FG+L
Sbjct: 135 VSEDNVAKVSDFGLTKEASSTQDTGKLPVK------WTAPEALREKKFSTKSDVWSFGIL 188
Query: 535 ILEM 538
+ E+
Sbjct: 189 LWEI 192
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 73/272 (26%), Positives = 122/272 (44%), Gaps = 34/272 (12%)
Query: 361 GSVYRGKINGGF-AAIKKVN-GDVS-----KEIALLNKINHSNLIILSGVCFNEGNCYLV 413
G V+ G NG A+K + G +S E L+ ++ H L+ L V E Y++
Sbjct: 32 GEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQEP-IYII 90
Query: 414 YEYAVNGTLSDWVFSNKNEGKYLDWKQRIQIALDVATGLNYLHSFTNPPHVHKDINSSNV 473
EY NG+L D F G L + + +A +A G+ ++ ++H+D+ ++N+
Sbjct: 91 TEYMENGSLVD--FLKTPSGIKLTINKLLDMAAQIAEGMAFIEERN---YIHRDLRAANI 145
Query: 474 LLDSDLRAKIANFAMARPAEGQEGEFALTRHIVGTKGYMAPEYLENGLVSTKLDVYAFGV 533
L+ L KIA+F +AR E + E+ + APE + G + K DV++FG+
Sbjct: 146 LVSDTLSCKIADFGLARLIE--DNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGI 203
Query: 534 LILEMLTGKEAAALHAEENNMHLSDVLNAVLTKEDGEESLRHFIDPTLQGNYPLELALLV 593
L+ E++T M +V+ + E G +R N P EL
Sbjct: 204 LLTEIVTHGRIPY-----PGMTNPEVIQNL---ERGYRMVR-------PDNCPEEL---- 244
Query: 594 IRLIDACLKKDPTDRPTMYEIEHSLSNILNAS 625
+L+ C K+ P DRPT + L + A+
Sbjct: 245 YQLMRLCWKERPEDRPTFDYLRSVLEDFFTAT 276
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 55/180 (30%), Positives = 90/180 (50%), Gaps = 17/180 (9%)
Query: 374 AIKKVNGDVSKEIALLNKI-NHSNLIILSGVCFNEGNCYLVYEYAVNGTLSDWVFSNKNE 432
A +K D+ E+ ++ I H N+I L G C +G Y++ EYA G L +++ + +
Sbjct: 72 ATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPP 131
Query: 433 G------------KYLDWKQRIQIALDVATGLNYLHSFTNPPHVHKDINSSNVLLDSDLR 480
G + L K + A VA G+ YL S +H+D+ + NVL+ D
Sbjct: 132 GLEFSFNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKC---IHRDLAARNVLVTEDNV 188
Query: 481 AKIANFAMARPAEGQEGEFALTRHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLILEMLT 540
KIA+F +AR + T + K +MAPE L + + + + DV++FGVL+ E+ T
Sbjct: 189 MKIADFGLARDIHHIDXXKKTTNGRLPVK-WMAPEALFDRIYTHQSDVWSFGVLLWEIFT 247
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 76/268 (28%), Positives = 111/268 (41%), Gaps = 54/268 (20%)
Query: 361 GSVY--RGKINGGFAAIKKVN----------GDVSKEIALLNKINHSNLIILSGVCFNEG 408
G+VY R N AIKK++ D+ KE+ L K+ H N I G E
Sbjct: 68 GAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREH 127
Query: 409 NCYLVYEYAVNGTLSDWVFSNKNEGKYLDWKQRIQIAL---DVATGLNYLHSFTNPPHVH 465
+LV EY + G+ SD + +K Q ++IA GL YLHS +H
Sbjct: 128 TAWLVMEYCL-GSASDLLEVHKKP------LQEVEIAAVTHGALQGLAYLHSHNM---IH 177
Query: 466 KDINSSNVLLDSDLRAKIANFAMARPAEGQEGEFALTRHIVGTKGYMAPEY---LENGLV 522
+D+ + N+LL K+ +F G A VGT +MAPE ++ G
Sbjct: 178 RDVKAGNILLSEPGLVKLGDF-------GSASIMAPANXFVGTPYWMAPEVILAMDEGQY 230
Query: 523 STKLDVYAFGVLILEMLTGKEAAALHAEENNMHLSDVLNAVLTKEDGEESLRHFIDPTLQ 582
K+DV++ G+ +E+ K NM+ L + E P LQ
Sbjct: 231 DGKVDVWSLGITCIELAERKPPLF------NMNAMSALYHIAQNE----------SPALQ 274
Query: 583 GNYPLELALLVIRLIDACLKKDPTDRPT 610
+ E +D+CL+K P DRPT
Sbjct: 275 SGHWSE---YFRNFVDSCLQKIPQDRPT 299
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 73/272 (26%), Positives = 122/272 (44%), Gaps = 34/272 (12%)
Query: 361 GSVYRGKINGGF-AAIKKVN-GDVS-----KEIALLNKINHSNLIILSGVCFNEGNCYLV 413
G V+ G NG A+K + G +S E L+ ++ H L+ L V E Y++
Sbjct: 27 GEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQEP-IYII 85
Query: 414 YEYAVNGTLSDWVFSNKNEGKYLDWKQRIQIALDVATGLNYLHSFTNPPHVHKDINSSNV 473
EY NG+L D F G L + + +A +A G+ ++ ++H+D+ ++N+
Sbjct: 86 TEYMENGSLVD--FLKTPSGIKLTINKLLDMAAQIAEGMAFIEERN---YIHRDLRAANI 140
Query: 474 LLDSDLRAKIANFAMARPAEGQEGEFALTRHIVGTKGYMAPEYLENGLVSTKLDVYAFGV 533
L+ L KIA+F +AR E + E+ + APE + G + K DV++FG+
Sbjct: 141 LVSDTLSCKIADFGLARLIE--DNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGI 198
Query: 534 LILEMLTGKEAAALHAEENNMHLSDVLNAVLTKEDGEESLRHFIDPTLQGNYPLELALLV 593
L+ E++T M +V+ + E G +R N P EL
Sbjct: 199 LLTEIVTHGRIPY-----PGMTNPEVIQNL---ERGYRMVR-------PDNCPEEL---- 239
Query: 594 IRLIDACLKKDPTDRPTMYEIEHSLSNILNAS 625
+L+ C K+ P DRPT + L + A+
Sbjct: 240 YQLMRLCWKERPEDRPTFDYLRSVLEDFFTAT 271
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 76/268 (28%), Positives = 111/268 (41%), Gaps = 54/268 (20%)
Query: 361 GSVY--RGKINGGFAAIKKVN----------GDVSKEIALLNKINHSNLIILSGVCFNEG 408
G+VY R N AIKK++ D+ KE+ L K+ H N I G E
Sbjct: 29 GAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREH 88
Query: 409 NCYLVYEYAVNGTLSDWVFSNKNEGKYLDWKQRIQIAL---DVATGLNYLHSFTNPPHVH 465
+LV EY + G+ SD + +K Q ++IA GL YLHS +H
Sbjct: 89 TAWLVMEYCL-GSASDLLEVHKKP------LQEVEIAAVTHGALQGLAYLHSHNM---IH 138
Query: 466 KDINSSNVLLDSDLRAKIANFAMARPAEGQEGEFALTRHIVGTKGYMAPEY---LENGLV 522
+D+ + N+LL K+ +F G A VGT +MAPE ++ G
Sbjct: 139 RDVKAGNILLSEPGLVKLGDF-------GSASIMAPANXFVGTPYWMAPEVILAMDEGQY 191
Query: 523 STKLDVYAFGVLILEMLTGKEAAALHAEENNMHLSDVLNAVLTKEDGEESLRHFIDPTLQ 582
K+DV++ G+ +E+ K NM+ L + E P LQ
Sbjct: 192 DGKVDVWSLGITCIELAERKPPLF------NMNAMSALYHIAQNE----------SPALQ 235
Query: 583 GNYPLELALLVIRLIDACLKKDPTDRPT 610
+ E +D+CL+K P DRPT
Sbjct: 236 SGHWSE---YFRNFVDSCLQKIPQDRPT 260
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 76/275 (27%), Positives = 123/275 (44%), Gaps = 40/275 (14%)
Query: 361 GSVYRGKINGGF-AAIKKVN-GDVSK-----EIALLNKINHSNLIILSGVCFNEGNCYLV 413
G V+ G NG A+K + G +S E L+ ++ H L+ L V E Y++
Sbjct: 35 GEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQE-PIYII 93
Query: 414 YEYAVNGTLSDWVFSNKNEGKYLDWKQRIQIALDVATGLNYLHSFTNPPHVHKDINSSNV 473
EY NG+L D F G L + + +A +A G+ ++ ++H+D+ ++N+
Sbjct: 94 TEYMENGSLVD--FLKTPSGIKLTINKLLDMAAQIAEGMAFIEERN---YIHRDLRAANI 148
Query: 474 LLDSDLRAKIANFAMARPAEGQEGEFALTRHIVGTK---GYMAPEYLENGLVSTKLDVYA 530
L+ L KIA+F +AR E E R G K + APE + G + K DV++
Sbjct: 149 LVSDTLSCKIADFGLARLIEDNE---XTARE--GAKFPIKWTAPEAINYGTFTIKSDVWS 203
Query: 531 FGVLILEMLTGKEAAALHAEENNMHLSDVLNAVLTKEDGEESLRHFIDPTLQGNYPLELA 590
FG+L+ E++T M +V+ + E G +R N P EL
Sbjct: 204 FGILLTEIVTHGRIPY-----PGMTNPEVIQNL---ERGYRMVR-------PDNCPEEL- 247
Query: 591 LLVIRLIDACLKKDPTDRPTMYEIEHSLSNILNAS 625
+L+ C K+ P DRPT + L + A+
Sbjct: 248 ---YQLMRLCWKERPEDRPTFDYLRSVLEDFFTAT 279
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/252 (25%), Positives = 113/252 (44%), Gaps = 39/252 (15%)
Query: 381 DVSKEIALLNKINHSNLIILSGVCFNEGNCYLVYEYAVNGTLSDWVFSNKNEGKYLDWKQ 440
D +E ++ K++H L+ L GVC + LV+E+ +G LSD++ + + +
Sbjct: 48 DFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRG---LFAAET 104
Query: 441 RIQIALDVATGLNYLHSFTNPPHVHKDINSSNVLLDSDLRAKIANFAMARPAEGQEGEFA 500
+ + LDV G+ YL +H+D+ + N L+ + K+++F M R F
Sbjct: 105 LLGMCLDVCEGMAYLEEACV---IHRDLAARNCLVGENQVIKVSDFGMTR--------FV 153
Query: 501 LTRHIVGTKG------YMAPEYLENGLVSTKLDVYAFGVLILEMLTGKEAAALHAEENNM 554
L + G + +PE S+K DV++FGVL+ E+ + E + +N
Sbjct: 154 LDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFS--EGKIPYENRSN- 210
Query: 555 HLSDVLNAVLTKEDGEESLRHFIDPTLQGNYPLELALLVIRLIDACLKKDPTDRPTMYEI 614
S+V+ ED R + P L + V ++++ C K+ P DRP +
Sbjct: 211 --SEVV------EDISTGFRLY-KPRLASTH-------VYQIMNHCWKERPEDRPAFSRL 254
Query: 615 EHSLSNILNASL 626
L+ I + L
Sbjct: 255 LRQLAEIAESGL 266
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 76/275 (27%), Positives = 123/275 (44%), Gaps = 40/275 (14%)
Query: 361 GSVYRGKINGGF-AAIKKVN-GDVSK-----EIALLNKINHSNLIILSGVCFNEGNCYLV 413
G V+ G NG A+K + G +S E L+ ++ H L+ L V E Y++
Sbjct: 36 GEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQE-PIYII 94
Query: 414 YEYAVNGTLSDWVFSNKNEGKYLDWKQRIQIALDVATGLNYLHSFTNPPHVHKDINSSNV 473
EY NG+L D F G L + + +A +A G+ ++ ++H+D+ ++N+
Sbjct: 95 TEYMENGSLVD--FLKTPSGIKLTINKLLDMAAQIAEGMAFIEERN---YIHRDLRAANI 149
Query: 474 LLDSDLRAKIANFAMARPAEGQEGEFALTRHIVGTK---GYMAPEYLENGLVSTKLDVYA 530
L+ L KIA+F +AR E E R G K + APE + G + K DV++
Sbjct: 150 LVSDTLSCKIADFGLARLIEDNE---XTARE--GAKFPIKWTAPEAINYGTFTIKSDVWS 204
Query: 531 FGVLILEMLTGKEAAALHAEENNMHLSDVLNAVLTKEDGEESLRHFIDPTLQGNYPLELA 590
FG+L+ E++T M +V+ + E G +R N P EL
Sbjct: 205 FGILLTEIVTHGRIPY-----PGMTNPEVIQNL---ERGYRMVR-------PDNCPEEL- 248
Query: 591 LLVIRLIDACLKKDPTDRPTMYEIEHSLSNILNAS 625
+L+ C K+ P DRPT + L + A+
Sbjct: 249 ---YQLMRLCWKERPEDRPTFDYLRSVLEDFFTAT 280
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 76/275 (27%), Positives = 123/275 (44%), Gaps = 40/275 (14%)
Query: 361 GSVYRGKINGGF-AAIKKVN-GDVSK-----EIALLNKINHSNLIILSGVCFNEGNCYLV 413
G V+ G NG A+K + G +S E L+ ++ H L+ L V E Y++
Sbjct: 33 GEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQEP-IYII 91
Query: 414 YEYAVNGTLSDWVFSNKNEGKYLDWKQRIQIALDVATGLNYLHSFTNPPHVHKDINSSNV 473
EY NG+L D F G L + + +A +A G+ ++ ++H+D+ ++N+
Sbjct: 92 TEYMENGSLVD--FLKTPSGIKLTINKLLDMAAQIAEGMAFIEERN---YIHRDLRAANI 146
Query: 474 LLDSDLRAKIANFAMARPAEGQEGEFALTRHIVGTK---GYMAPEYLENGLVSTKLDVYA 530
L+ L KIA+F +AR E E R G K + APE + G + K DV++
Sbjct: 147 LVSDTLSCKIADFGLARLIEDNE---XTARE--GAKFPIKWTAPEAINYGTFTIKSDVWS 201
Query: 531 FGVLILEMLTGKEAAALHAEENNMHLSDVLNAVLTKEDGEESLRHFIDPTLQGNYPLELA 590
FG+L+ E++T M +V+ + E G +R N P EL
Sbjct: 202 FGILLTEIVTHGRIPY-----PGMTNPEVIQNL---ERGYRMVR-------PDNCPEEL- 245
Query: 591 LLVIRLIDACLKKDPTDRPTMYEIEHSLSNILNAS 625
+L+ C K+ P DRPT + L + A+
Sbjct: 246 ---YQLMRLCWKERPEDRPTFDYLRSVLEDFFTAT 277
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/252 (25%), Positives = 113/252 (44%), Gaps = 39/252 (15%)
Query: 381 DVSKEIALLNKINHSNLIILSGVCFNEGNCYLVYEYAVNGTLSDWVFSNKNEGKYLDWKQ 440
D +E ++ K++H L+ L GVC + LV+E+ +G LSD++ + + +
Sbjct: 68 DFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRG---LFAAET 124
Query: 441 RIQIALDVATGLNYLHSFTNPPHVHKDINSSNVLLDSDLRAKIANFAMARPAEGQEGEFA 500
+ + LDV G+ YL +H+D+ + N L+ + K+++F M R F
Sbjct: 125 LLGMCLDVCEGMAYLEEACV---IHRDLAARNCLVGENQVIKVSDFGMTR--------FV 173
Query: 501 LTRHIVGTKG------YMAPEYLENGLVSTKLDVYAFGVLILEMLTGKEAAALHAEENNM 554
L + G + +PE S+K DV++FGVL+ E+ + E + +N
Sbjct: 174 LDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFS--EGKIPYENRSN- 230
Query: 555 HLSDVLNAVLTKEDGEESLRHFIDPTLQGNYPLELALLVIRLIDACLKKDPTDRPTMYEI 614
S+V+ ED R + P L + V ++++ C K+ P DRP +
Sbjct: 231 --SEVV------EDISTGFRLY-KPRLASTH-------VYQIMNHCWKERPEDRPAFSRL 274
Query: 615 EHSLSNILNASL 626
L+ I + L
Sbjct: 275 LRQLAEIAESGL 286
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 73/277 (26%), Positives = 118/277 (42%), Gaps = 42/277 (15%)
Query: 361 GSVYRG--KINGGFAAIKKVNGDVS------KEIALLNKINHSNLIILSGVCFNEGNCYL 412
G VY G K A+K + D KE A++ +I H NL+ L GVC E Y+
Sbjct: 32 GEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYI 91
Query: 413 VYEYAVNGTLSDWVFS-NKNEGKYLDWKQRIQIALDVATGLNYLHSFTNPPHVHKDINSS 471
+ E+ G L D++ N+ E + + +A +++ + YL +H+D+ +
Sbjct: 92 ITEFMTYGNLLDYLRECNRQEVSAV---VLLYMATQISSAMEYLEKKN---FIHRDLAAR 145
Query: 472 NVLLDSDLRAKIANFAMARPAEGQEGEFALTRHIVGTK---GYMAPEYLENGLVSTKLDV 528
N L+ + K+A+F ++R G T H G K + APE L S K DV
Sbjct: 146 NCLVGENHLVKVADFGLSRLMTGD----TYTAH-AGAKFPIKWTAPESLAYNKFSIKSDV 200
Query: 529 YAFGVLILEMLTGKEAAALHAEENNMHLSDVLNAVLTKEDGEESLRHFIDPTLQGNYPLE 588
+AFGVL+ E+ T + + LS V ++ + P
Sbjct: 201 WAFGVLLWEIATYGMSPY-----PGIDLSQVYE--------------LLEKDYRMERPEG 241
Query: 589 LALLVIRLIDACLKKDPTDRPTMYEIEHSLSNILNAS 625
V L+ AC + +P+DRP+ EI + + S
Sbjct: 242 CPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQES 278
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 76/275 (27%), Positives = 123/275 (44%), Gaps = 40/275 (14%)
Query: 361 GSVYRGKINGGF-AAIKKV-NGDVSK-----EIALLNKINHSNLIILSGVCFNEGNCYLV 413
G V+ G NG A+K + G +S E L+ ++ H L+ L V E Y++
Sbjct: 27 GEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQE-PIYII 85
Query: 414 YEYAVNGTLSDWVFSNKNEGKYLDWKQRIQIALDVATGLNYLHSFTNPPHVHKDINSSNV 473
EY NG+L D F G L + + +A +A G+ ++ ++H+D+ ++N+
Sbjct: 86 TEYMENGSLVD--FLKTPSGIKLTINKLLDMAAQIAEGMAFIEERN---YIHRDLRAANI 140
Query: 474 LLDSDLRAKIANFAMARPAEGQEGEFALTRHIVGTK---GYMAPEYLENGLVSTKLDVYA 530
L+ L KIA+F +AR E E R G K + APE + G + K DV++
Sbjct: 141 LVSDTLSCKIADFGLARLIEDNE---XTARE--GAKFPIKWTAPEAINYGTFTIKSDVWS 195
Query: 531 FGVLILEMLTGKEAAALHAEENNMHLSDVLNAVLTKEDGEESLRHFIDPTLQGNYPLELA 590
FG+L+ E++T M +V+ + E G +R N P EL
Sbjct: 196 FGILLTEIVTHGRIPY-----PGMTNPEVIQNL---ERGYRMVR-------PDNCPEEL- 239
Query: 591 LLVIRLIDACLKKDPTDRPTMYEIEHSLSNILNAS 625
+L+ C K+ P DRPT + L + A+
Sbjct: 240 ---YQLMRLCWKERPEDRPTFDYLRSVLEDFFTAT 271
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 73/277 (26%), Positives = 118/277 (42%), Gaps = 42/277 (15%)
Query: 361 GSVYRG--KINGGFAAIKKVNGDVS------KEIALLNKINHSNLIILSGVCFNEGNCYL 412
G VY G K A+K + D KE A++ +I H NL+ L GVC E Y+
Sbjct: 27 GEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYI 86
Query: 413 VYEYAVNGTLSDWVFS-NKNEGKYLDWKQRIQIALDVATGLNYLHSFTNPPHVHKDINSS 471
+ E+ G L D++ N+ E + + +A +++ + YL +H+D+ +
Sbjct: 87 IIEFMTYGNLLDYLRECNRQEVSAV---VLLYMATQISSAMEYLE---KKNFIHRDLAAR 140
Query: 472 NVLLDSDLRAKIANFAMARPAEGQEGEFALTRHIVGTK---GYMAPEYLENGLVSTKLDV 528
N L+ + K+A+F ++R G T H G K + APE L S K DV
Sbjct: 141 NCLVGENHLVKVADFGLSRLMTGD----TYTAH-AGAKFPIKWTAPESLAYNKFSIKSDV 195
Query: 529 YAFGVLILEMLTGKEAAALHAEENNMHLSDVLNAVLTKEDGEESLRHFIDPTLQGNYPLE 588
+AFGVL+ E+ T + + LS V ++ + P
Sbjct: 196 WAFGVLLWEIATYGMSPY-----PGIDLSQVYE--------------LLEKDYRMERPEG 236
Query: 589 LALLVIRLIDACLKKDPTDRPTMYEIEHSLSNILNAS 625
V L+ AC + +P+DRP+ EI + + S
Sbjct: 237 CPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQES 273
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 73/277 (26%), Positives = 118/277 (42%), Gaps = 42/277 (15%)
Query: 361 GSVYRG--KINGGFAAIKKVNGDVS------KEIALLNKINHSNLIILSGVCFNEGNCYL 412
G VY G K A+K + D KE A++ +I H NL+ L GVC E Y+
Sbjct: 28 GEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYI 87
Query: 413 VYEYAVNGTLSDWVFS-NKNEGKYLDWKQRIQIALDVATGLNYLHSFTNPPHVHKDINSS 471
+ E+ G L D++ N+ E + + +A +++ + YL +H+D+ +
Sbjct: 88 IIEFMTYGNLLDYLRECNRQEVNAV---VLLYMATQISSAMEYLEKKN---FIHRDLAAR 141
Query: 472 NVLLDSDLRAKIANFAMARPAEGQEGEFALTRHIVGTK---GYMAPEYLENGLVSTKLDV 528
N L+ + K+A+F ++R G T H G K + APE L S K DV
Sbjct: 142 NCLVGENHLVKVADFGLSRLMTGD----TXTAH-AGAKFPIKWTAPESLAYNKFSIKSDV 196
Query: 529 YAFGVLILEMLTGKEAAALHAEENNMHLSDVLNAVLTKEDGEESLRHFIDPTLQGNYPLE 588
+AFGVL+ E+ T + + LS V ++ + P
Sbjct: 197 WAFGVLLWEIATYGMSPY-----PGIDLSQVYE--------------LLEKDYRMERPEG 237
Query: 589 LALLVIRLIDACLKKDPTDRPTMYEIEHSLSNILNAS 625
V L+ AC + +P+DRP+ EI + + S
Sbjct: 238 CPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQES 274
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 76/275 (27%), Positives = 123/275 (44%), Gaps = 40/275 (14%)
Query: 361 GSVYRGKINGGF-AAIKKVN-GDVS-----KEIALLNKINHSNLIILSGVCFNEGNCYLV 413
G V+ G NG A+K + G +S E L+ ++ H L+ L V E Y++
Sbjct: 27 GEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQE-PIYII 85
Query: 414 YEYAVNGTLSDWVFSNKNEGKYLDWKQRIQIALDVATGLNYLHSFTNPPHVHKDINSSNV 473
EY NG+L D F G L + + +A +A G+ ++ ++H+D+ ++N+
Sbjct: 86 TEYMENGSLVD--FLKTPSGIKLTINKLLDMAAQIAEGMAFIEERN---YIHRDLRAANI 140
Query: 474 LLDSDLRAKIANFAMARPAEGQEGEFALTRHIVGTK---GYMAPEYLENGLVSTKLDVYA 530
L+ L KIA+F +AR E E R G K + APE + G + K DV++
Sbjct: 141 LVSDTLSCKIADFGLARLIEDAE---XTARE--GAKFPIKWTAPEAINYGTFTIKSDVWS 195
Query: 531 FGVLILEMLTGKEAAALHAEENNMHLSDVLNAVLTKEDGEESLRHFIDPTLQGNYPLELA 590
FG+L+ E++T M +V+ + E G +R N P EL
Sbjct: 196 FGILLTEIVTHGRIPY-----PGMTNPEVIQNL---ERGYRMVR-------PDNCPEEL- 239
Query: 591 LLVIRLIDACLKKDPTDRPTMYEIEHSLSNILNAS 625
+L+ C K+ P DRPT + L + A+
Sbjct: 240 ---YQLMRLCWKERPEDRPTFDYLRSVLEDFFTAT 271
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 48/180 (26%), Positives = 89/180 (49%), Gaps = 15/180 (8%)
Query: 370 GGFAAIKKVNG-------DVSKEIALLNKINHSNLIILSGVCFNEG--NCYLVYEYAVNG 420
G A+KK+ D +EI +L + H N++ GVC++ G N L+ EY G
Sbjct: 39 GEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYG 98
Query: 421 TLSDWVFSNKNEGKYLDWKQRIQIALDVATGLNYLHSFTNPPHVHKDINSSNVLLDSDLR 480
+L D++ +K +D + +Q + G+ YL + ++H+D+ + N+L++++ R
Sbjct: 99 SLRDYLQKHKER---IDHIKLLQYTSQICKGMEYLGT---KRYIHRDLATRNILVENENR 152
Query: 481 AKIANFAMARPAEGQEGEFALTRHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLILEMLT 540
KI +F + + + F + + APE L S DV++FGV++ E+ T
Sbjct: 153 VKIGDFGLTKVLPQDKEFFKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 212
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 73/277 (26%), Positives = 118/277 (42%), Gaps = 42/277 (15%)
Query: 361 GSVYRG--KINGGFAAIKKVNGDVS------KEIALLNKINHSNLIILSGVCFNEGNCYL 412
G VY G K A+K + D KE A++ +I H NL+ L GVC E Y+
Sbjct: 31 GEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYI 90
Query: 413 VYEYAVNGTLSDWVFS-NKNEGKYLDWKQRIQIALDVATGLNYLHSFTNPPHVHKDINSS 471
+ E+ G L D++ N+ E + + +A +++ + YL +H+D+ +
Sbjct: 91 ITEFMTYGNLLDYLRECNRQEVNAV---VLLYMATQISSAMEYLEKKN---FIHRDLAAR 144
Query: 472 NVLLDSDLRAKIANFAMARPAEGQEGEFALTRHIVGTK---GYMAPEYLENGLVSTKLDV 528
N L+ + K+A+F ++R G T H G K + APE L S K DV
Sbjct: 145 NCLVGENHLVKVADFGLSRLMTGD----TYTAH-AGAKFPIKWTAPESLAYNKFSIKSDV 199
Query: 529 YAFGVLILEMLTGKEAAALHAEENNMHLSDVLNAVLTKEDGEESLRHFIDPTLQGNYPLE 588
+AFGVL+ E+ T + + LS V ++ + P
Sbjct: 200 WAFGVLLWEIATYGMSPY-----PGIDLSQVYE--------------LLEKDYRMERPEG 240
Query: 589 LALLVIRLIDACLKKDPTDRPTMYEIEHSLSNILNAS 625
V L+ AC + +P+DRP+ EI + + S
Sbjct: 241 CPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQES 277
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/252 (25%), Positives = 113/252 (44%), Gaps = 39/252 (15%)
Query: 381 DVSKEIALLNKINHSNLIILSGVCFNEGNCYLVYEYAVNGTLSDWVFSNKNEGKYLDWKQ 440
D +E ++ K++H L+ L GVC + LV+E+ +G LSD++ + + +
Sbjct: 46 DFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRG---LFAAET 102
Query: 441 RIQIALDVATGLNYLHSFTNPPHVHKDINSSNVLLDSDLRAKIANFAMARPAEGQEGEFA 500
+ + LDV G+ YL +H+D+ + N L+ + K+++F M R F
Sbjct: 103 LLGMCLDVCEGMAYLEEACV---IHRDLAARNCLVGENQVIKVSDFGMTR--------FV 151
Query: 501 LTRHIVGTKG------YMAPEYLENGLVSTKLDVYAFGVLILEMLTGKEAAALHAEENNM 554
L + G + +PE S+K DV++FGVL+ E+ + E + +N
Sbjct: 152 LDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFS--EGKIPYENRSN- 208
Query: 555 HLSDVLNAVLTKEDGEESLRHFIDPTLQGNYPLELALLVIRLIDACLKKDPTDRPTMYEI 614
S+V+ ED R + P L + V ++++ C K+ P DRP +
Sbjct: 209 --SEVV------EDISTGFRLY-KPRLASTH-------VYQIMNHCWKERPEDRPAFSRL 252
Query: 615 EHSLSNILNASL 626
L+ I + L
Sbjct: 253 LRQLAEIAESGL 264
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 76/275 (27%), Positives = 123/275 (44%), Gaps = 40/275 (14%)
Query: 361 GSVYRGKINGGF-AAIKKVN-GDVS-----KEIALLNKINHSNLIILSGVCFNEGNCYLV 413
G V+ G NG A+K + G +S E L+ ++ H L+ L V E Y++
Sbjct: 29 GEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQEP-IYII 87
Query: 414 YEYAVNGTLSDWVFSNKNEGKYLDWKQRIQIALDVATGLNYLHSFTNPPHVHKDINSSNV 473
EY NG+L D F G L + + +A +A G+ ++ ++H+D+ ++N+
Sbjct: 88 TEYMENGSLVD--FLKTPSGIKLTINKLLDMAAQIAEGMAFIEERN---YIHRDLRAANI 142
Query: 474 LLDSDLRAKIANFAMARPAEGQEGEFALTRHIVGTK---GYMAPEYLENGLVSTKLDVYA 530
L+ L KIA+F +AR E E R G K + APE + G + K DV++
Sbjct: 143 LVSDTLSCKIADFGLARLIEDNE---XTARE--GAKFPIKWTAPEAINYGTFTIKSDVWS 197
Query: 531 FGVLILEMLTGKEAAALHAEENNMHLSDVLNAVLTKEDGEESLRHFIDPTLQGNYPLELA 590
FG+L+ E++T M +V+ + E G +R N P EL
Sbjct: 198 FGILLTEIVTHGRIPY-----PGMTNPEVIQNL---ERGYRMVR-------PDNCPEEL- 241
Query: 591 LLVIRLIDACLKKDPTDRPTMYEIEHSLSNILNAS 625
+L+ C K+ P DRPT + L + A+
Sbjct: 242 ---YQLMRLCWKERPEDRPTFDYLRSVLEDFFTAT 273
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 73/277 (26%), Positives = 118/277 (42%), Gaps = 42/277 (15%)
Query: 361 GSVYRG--KINGGFAAIKKVNGDVS------KEIALLNKINHSNLIILSGVCFNEGNCYL 412
G VY G K A+K + D KE A++ +I H NL+ L GVC E Y+
Sbjct: 27 GEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYI 86
Query: 413 VYEYAVNGTLSDWVFS-NKNEGKYLDWKQRIQIALDVATGLNYLHSFTNPPHVHKDINSS 471
+ E+ G L D++ N+ E + + +A +++ + YL +H+D+ +
Sbjct: 87 ITEFMTYGNLLDYLRECNRQEVSAV---VLLYMATQISSAMEYLE---KKNFIHRDLAAR 140
Query: 472 NVLLDSDLRAKIANFAMARPAEGQEGEFALTRHIVGTK---GYMAPEYLENGLVSTKLDV 528
N L+ + K+A+F ++R G T H G K + APE L S K DV
Sbjct: 141 NCLVGENHLVKVADFGLSRLMTGD----TYTAH-AGAKFPIKWTAPESLAYNKFSIKSDV 195
Query: 529 YAFGVLILEMLTGKEAAALHAEENNMHLSDVLNAVLTKEDGEESLRHFIDPTLQGNYPLE 588
+AFGVL+ E+ T + + LS V ++ + P
Sbjct: 196 WAFGVLLWEIATYGMSPY-----PGIDLSQVYE--------------LLEKDYRMERPEG 236
Query: 589 LALLVIRLIDACLKKDPTDRPTMYEIEHSLSNILNAS 625
V L+ AC + +P+DRP+ EI + + S
Sbjct: 237 CPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQES 273
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 73/277 (26%), Positives = 119/277 (42%), Gaps = 42/277 (15%)
Query: 361 GSVYRG--KINGGFAAIKKVNGDVS------KEIALLNKINHSNLIILSGVCFNEGNCYL 412
G VY G K A+K + D KE A++ +I H NL+ L GVC E Y+
Sbjct: 32 GEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYI 91
Query: 413 VYEYAVNGTLSDWVFS-NKNEGKYLDWKQRIQIALDVATGLNYLHSFTNPPHVHKDINSS 471
+ E+ G L D++ N+ E ++ + +A +++ + YL +H+D+ +
Sbjct: 92 ITEFMTYGNLLDYLRECNRQE---VNAVVLLYMATQISSAMEYLEKKN---FIHRDLAAR 145
Query: 472 NVLLDSDLRAKIANFAMARPAEGQEGEFALTRHIVGTK---GYMAPEYLENGLVSTKLDV 528
N L+ + K+A+F ++R G T H G K + APE L S K DV
Sbjct: 146 NCLVGENHLVKVADFGLSRLMTGD----TYTAH-AGAKFPIKWTAPESLAYNKFSIKSDV 200
Query: 529 YAFGVLILEMLTGKEAAALHAEENNMHLSDVLNAVLTKEDGEESLRHFIDPTLQGNYPLE 588
+AFGVL+ E+ T + + LS V ++ + P
Sbjct: 201 WAFGVLLWEIATYGMSPY-----PGIDLSQVYE--------------LLEKDYRMERPEG 241
Query: 589 LALLVIRLIDACLKKDPTDRPTMYEIEHSLSNILNAS 625
V L+ AC + +P+DRP+ EI + + S
Sbjct: 242 CPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQES 278
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 73/277 (26%), Positives = 118/277 (42%), Gaps = 42/277 (15%)
Query: 361 GSVYRG--KINGGFAAIKKVNGDVS------KEIALLNKINHSNLIILSGVCFNEGNCYL 412
G VY G K A+K + D KE A++ +I H NL+ L GVC E Y+
Sbjct: 27 GEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYI 86
Query: 413 VYEYAVNGTLSDWVFS-NKNEGKYLDWKQRIQIALDVATGLNYLHSFTNPPHVHKDINSS 471
+ E+ G L D++ N+ E + + +A +++ + YL +H+D+ +
Sbjct: 87 ITEFMTYGNLLDYLRECNRQEVNAV---VLLYMATQISSAMEYLEKKN---FIHRDLAAR 140
Query: 472 NVLLDSDLRAKIANFAMARPAEGQEGEFALTRHIVGTK---GYMAPEYLENGLVSTKLDV 528
N L+ + K+A+F ++R G T H G K + APE L S K DV
Sbjct: 141 NCLVGENHLVKVADFGLSRLMTGD----TYTAH-AGAKFPIKWTAPESLAYNKFSIKSDV 195
Query: 529 YAFGVLILEMLTGKEAAALHAEENNMHLSDVLNAVLTKEDGEESLRHFIDPTLQGNYPLE 588
+AFGVL+ E+ T + + LS V ++ + P
Sbjct: 196 WAFGVLLWEIATYGMSPY-----PGIDLSQVYE--------------LLEKDYRMERPEG 236
Query: 589 LALLVIRLIDACLKKDPTDRPTMYEIEHSLSNILNAS 625
V L+ AC + +P+DRP+ EI + + S
Sbjct: 237 CPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQES 273
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 73/277 (26%), Positives = 118/277 (42%), Gaps = 42/277 (15%)
Query: 361 GSVYRG--KINGGFAAIKKVNGDVS------KEIALLNKINHSNLIILSGVCFNEGNCYL 412
G VY G K A+K + D KE A++ +I H NL+ L GVC E Y+
Sbjct: 27 GEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYI 86
Query: 413 VYEYAVNGTLSDWVFS-NKNEGKYLDWKQRIQIALDVATGLNYLHSFTNPPHVHKDINSS 471
+ E+ G L D++ N+ E + + +A +++ + YL +H+D+ +
Sbjct: 87 ITEFMTYGNLLDYLRECNRQEVSAV---VLLYMATQISSAMEYLE---KKNFIHRDLAAR 140
Query: 472 NVLLDSDLRAKIANFAMARPAEGQEGEFALTRHIVGTK---GYMAPEYLENGLVSTKLDV 528
N L+ + K+A+F ++R G T H G K + APE L S K DV
Sbjct: 141 NCLVGENHLVKVADFGLSRLMTGD----TYTAH-AGAKFPIKWTAPESLAYNKFSIKSDV 195
Query: 529 YAFGVLILEMLTGKEAAALHAEENNMHLSDVLNAVLTKEDGEESLRHFIDPTLQGNYPLE 588
+AFGVL+ E+ T + + LS V ++ + P
Sbjct: 196 WAFGVLLWEIATYGMSPY-----PGIDLSQVYE--------------LLEKDYRMERPEG 236
Query: 589 LALLVIRLIDACLKKDPTDRPTMYEIEHSLSNILNAS 625
V L+ AC + +P+DRP+ EI + + S
Sbjct: 237 CPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQES 273
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 73/277 (26%), Positives = 118/277 (42%), Gaps = 42/277 (15%)
Query: 361 GSVYRG--KINGGFAAIKKVNGDVS------KEIALLNKINHSNLIILSGVCFNEGNCYL 412
G VY G K A+K + D KE A++ +I H NL+ L GVC E Y+
Sbjct: 32 GEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYI 91
Query: 413 VYEYAVNGTLSDWVFS-NKNEGKYLDWKQRIQIALDVATGLNYLHSFTNPPHVHKDINSS 471
+ E+ G L D++ N+ E + + +A +++ + YL +H+D+ +
Sbjct: 92 ITEFMTYGNLLDYLRECNRQEVNAV---VLLYMATQISSAMEYLEKKN---FIHRDLAAR 145
Query: 472 NVLLDSDLRAKIANFAMARPAEGQEGEFALTRHIVGTK---GYMAPEYLENGLVSTKLDV 528
N L+ + K+A+F ++R G T H G K + APE L S K DV
Sbjct: 146 NCLVGENHLVKVADFGLSRLMTGD----TXTAH-AGAKFPIKWTAPESLAYNKFSIKSDV 200
Query: 529 YAFGVLILEMLTGKEAAALHAEENNMHLSDVLNAVLTKEDGEESLRHFIDPTLQGNYPLE 588
+AFGVL+ E+ T + + LS V ++ + P
Sbjct: 201 WAFGVLLWEIATYGMSPY-----PGIDLSQVYE--------------LLEKDYRMERPEG 241
Query: 589 LALLVIRLIDACLKKDPTDRPTMYEIEHSLSNILNAS 625
V L+ AC + +P+DRP+ EI + + S
Sbjct: 242 CPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQES 278
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 65/240 (27%), Positives = 108/240 (45%), Gaps = 30/240 (12%)
Query: 384 KEIALLNKINHSNLIILSGVCFNEGNCYLVYEYAVNGTLSDWVFSNKNEGKYLDWKQRIQ 443
+E +L + +H N++ L GVC + Y+V E G D++ + EG L K +Q
Sbjct: 161 QEARILKQYSHPNIVRLIGVCTQKQPIYIVMELVQGG---DFLTFLRTEGARLRVKTLLQ 217
Query: 444 IALDVATGLNYLHSFTNPPHVHKDINSSNVLLDSDLRAKIANFAMARPAEGQEGEFALTR 503
+ D A G+ YL S +H+D+ + N L+ KI++F M+R E +G +A +
Sbjct: 218 MVGDAAAGMEYLESKCC---IHRDLAARNCLVTEKNVLKISDFGMSR--EEADGVYAASG 272
Query: 504 HI--VGTKGYMAPEYLENGLVSTKLDVYAFGVLILEMLTGKEAAALHAEENNMHLSDVLN 561
+ V K + APE L G S++ DV++FG+L+ E + L
Sbjct: 273 GLRQVPVK-WTAPEALNYGRYSSESDVWSFGILLWETFS-------------------LG 312
Query: 562 AVLTKEDGEESLRHFIDPTLQGNYPLELALLVIRLIDACLKKDPTDRPTMYEIEHSLSNI 621
A + R F++ + P V RL++ C +P RP+ I L +I
Sbjct: 313 ASPYPNLSNQQTREFVEKGGRLPCPELCPDAVFRLMEQCWAYEPGQRPSFSTIYQELQSI 372
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 76/275 (27%), Positives = 123/275 (44%), Gaps = 40/275 (14%)
Query: 361 GSVYRGKINGGF-AAIKKVN-GDVS-----KEIALLNKINHSNLIILSGVCFNEGNCYLV 413
G V+ G NG A+K + G +S E L+ ++ H L+ L V E Y++
Sbjct: 28 GEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQEP-IYII 86
Query: 414 YEYAVNGTLSDWVFSNKNEGKYLDWKQRIQIALDVATGLNYLHSFTNPPHVHKDINSSNV 473
EY NG+L D F G L + + +A +A G+ ++ ++H+D+ ++N+
Sbjct: 87 TEYMENGSLVD--FLKTPSGIKLTINKLLDMAAQIAEGMAFIEERN---YIHRDLRAANI 141
Query: 474 LLDSDLRAKIANFAMARPAEGQEGEFALTRHIVGTK---GYMAPEYLENGLVSTKLDVYA 530
L+ L KIA+F +AR E E R G K + APE + G + K DV++
Sbjct: 142 LVSDTLSCKIADFGLARLIEDNE---XTARE--GAKFPIKWTAPEAINYGTFTIKSDVWS 196
Query: 531 FGVLILEMLTGKEAAALHAEENNMHLSDVLNAVLTKEDGEESLRHFIDPTLQGNYPLELA 590
FG+L+ E++T M +V+ + E G +R N P EL
Sbjct: 197 FGILLTEIVTHGRIPY-----PGMTNPEVIQNL---ERGYRMVR-------PDNCPEEL- 240
Query: 591 LLVIRLIDACLKKDPTDRPTMYEIEHSLSNILNAS 625
+L+ C K+ P DRPT + L + A+
Sbjct: 241 ---YQLMRLCWKERPEDRPTFDYLRSVLEDFFTAT 272
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 76/275 (27%), Positives = 123/275 (44%), Gaps = 40/275 (14%)
Query: 361 GSVYRGKINGGF-AAIKKVN-GDVS-----KEIALLNKINHSNLIILSGVCFNEGNCYLV 413
G V+ G NG A+K + G +S E L+ ++ H L+ L V E Y++
Sbjct: 27 GEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQEP-IYII 85
Query: 414 YEYAVNGTLSDWVFSNKNEGKYLDWKQRIQIALDVATGLNYLHSFTNPPHVHKDINSSNV 473
EY NG+L D F G L + + +A +A G+ ++ ++H+D+ ++N+
Sbjct: 86 TEYMENGSLVD--FLKTPSGIKLTINKLLDMAAQIAEGMAFIEERN---YIHRDLRAANI 140
Query: 474 LLDSDLRAKIANFAMARPAEGQEGEFALTRHIVGTK---GYMAPEYLENGLVSTKLDVYA 530
L+ L KIA+F +AR E E R G K + APE + G + K DV++
Sbjct: 141 LVSDTLSCKIADFGLARLIEDNE---XTARE--GAKFPIKWTAPEAINYGTFTIKSDVWS 195
Query: 531 FGVLILEMLTGKEAAALHAEENNMHLSDVLNAVLTKEDGEESLRHFIDPTLQGNYPLELA 590
FG+L+ E++T M +V+ + E G +R N P EL
Sbjct: 196 FGILLTEIVTHGRIPY-----PGMTNPEVIQNL---ERGYRMVR-------PDNCPEEL- 239
Query: 591 LLVIRLIDACLKKDPTDRPTMYEIEHSLSNILNAS 625
+L+ C K+ P DRPT + L + A+
Sbjct: 240 ---YQLMRLCWKERPEDRPTFDYLRSVLEDFFTAT 271
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 73/277 (26%), Positives = 118/277 (42%), Gaps = 42/277 (15%)
Query: 361 GSVYRG--KINGGFAAIKKVNGDVS------KEIALLNKINHSNLIILSGVCFNEGNCYL 412
G VY G K A+K + D KE A++ +I H NL+ L GVC E Y+
Sbjct: 27 GEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYI 86
Query: 413 VYEYAVNGTLSDWVFS-NKNEGKYLDWKQRIQIALDVATGLNYLHSFTNPPHVHKDINSS 471
+ E+ G L D++ N+ E + + +A +++ + YL +H+D+ +
Sbjct: 87 IIEFMTYGNLLDYLRECNRQEVSAV---VLLYMATQISSAMEYLE---KKNFIHRDLAAR 140
Query: 472 NVLLDSDLRAKIANFAMARPAEGQEGEFALTRHIVGTK---GYMAPEYLENGLVSTKLDV 528
N L+ + K+A+F ++R G T H G K + APE L S K DV
Sbjct: 141 NCLVGENHLVKVADFGLSRLMTGD----TYTAH-AGAKFPIKWTAPESLAYNKFSIKSDV 195
Query: 529 YAFGVLILEMLTGKEAAALHAEENNMHLSDVLNAVLTKEDGEESLRHFIDPTLQGNYPLE 588
+AFGVL+ E+ T + + LS V ++ + P
Sbjct: 196 WAFGVLLWEIATYGMSPY-----PGIDLSQVYE--------------LLEKDYRMERPEG 236
Query: 589 LALLVIRLIDACLKKDPTDRPTMYEIEHSLSNILNAS 625
V L+ AC + +P+DRP+ EI + + S
Sbjct: 237 CPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQES 273
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 73/277 (26%), Positives = 119/277 (42%), Gaps = 42/277 (15%)
Query: 361 GSVYRG--KINGGFAAIKKVNGDVS------KEIALLNKINHSNLIILSGVCFNEGNCYL 412
G VY G K A+K + D KE A++ +I H NL+ L GVC E Y+
Sbjct: 40 GEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYI 99
Query: 413 VYEYAVNGTLSDWVFS-NKNEGKYLDWKQRIQIALDVATGLNYLHSFTNPPHVHKDINSS 471
+ E+ G L D++ N+ E ++ + +A +++ + YL +H+D+ +
Sbjct: 100 ITEFMTYGNLLDYLRECNRQE---VNAVVLLYMATQISSAMEYLE---KKNFIHRDLAAR 153
Query: 472 NVLLDSDLRAKIANFAMARPAEGQEGEFALTRHIVGTK---GYMAPEYLENGLVSTKLDV 528
N L+ + K+A+F ++R G T H G K + APE L S K DV
Sbjct: 154 NCLVGENHLVKVADFGLSRLMTGD----TYTAH-AGAKFPIKWTAPESLAYNKFSIKSDV 208
Query: 529 YAFGVLILEMLTGKEAAALHAEENNMHLSDVLNAVLTKEDGEESLRHFIDPTLQGNYPLE 588
+AFGVL+ E+ T + + LS V ++ + P
Sbjct: 209 WAFGVLLWEIATYGMSPY-----PGIDLSQVYE--------------LLEKDYRMERPEG 249
Query: 589 LALLVIRLIDACLKKDPTDRPTMYEIEHSLSNILNAS 625
V L+ AC + +P+DRP+ EI + + S
Sbjct: 250 CPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQES 286
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 71/264 (26%), Positives = 121/264 (45%), Gaps = 43/264 (16%)
Query: 374 AIKKVNGDVSKEIALLNKI-NHSNLIILSGVCFNEGNCYLVYEYAVNGTLSDWVFSNK-- 430
A K + D + E+ +L K+ +H N+I L G C + G YL EYA +G L D++ ++
Sbjct: 54 ASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVL 113
Query: 431 ----------NEGKYLDWKQRIQIALDVATGLNYLHSFTNPPHVHKDINSSNVLLDSDLR 480
+ L +Q + A DVA G++YL + +H+D+ + N+L+ +
Sbjct: 114 ETDPAFAIANSTASTLSSQQLLHFAADVARGMDYL---SQKQFIHRDLAARNILVGENYV 170
Query: 481 AKIANFAMARPAEGQEGEFALTRHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLILEM-- 538
AKIA+F ++R GQE T + + +MA E L + +T DV+++GVL+ E+
Sbjct: 171 AKIADFGLSR---GQEVYVKKTMGRLPVR-WMAIESLNYSVYTTNSDVWSYGVLLWEIVS 226
Query: 539 LTGKEAAALHAEENNMHLSDVLNAVLTKEDGEESLRHFIDPTLQGNYPLELALLVIRLID 598
L G + E L + + PL V L+
Sbjct: 227 LGGTPYCGMTCAE---------------------LYEKLPQGYRLEKPLNCDDEVYDLMR 265
Query: 599 ACLKKDPTDRPTMYEIEHSLSNIL 622
C ++ P +RP+ +I SL+ +L
Sbjct: 266 QCWREKPYERPSFAQILVSLNRML 289
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 73/271 (26%), Positives = 121/271 (44%), Gaps = 34/271 (12%)
Query: 361 GSVYRGKINGGF-AAIKKVN-GDVS-----KEIALLNKINHSNLIILSGVCFNEGNCYLV 413
G V+ G NG A+K + G +S E L+ ++ H L+ L V E Y++
Sbjct: 22 GEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQEP-IYII 80
Query: 414 YEYAVNGTLSDWVFSNKNEGKYLDWKQRIQIALDVATGLNYLHSFTNPPHVHKDINSSNV 473
EY NG+L D F G L + + +A +A G+ ++ ++H+D+ ++N+
Sbjct: 81 TEYMENGSLVD--FLKTPSGIKLTINKLLDMAAQIAEGMAFIEERN---YIHRDLRAANI 135
Query: 474 LLDSDLRAKIANFAMARPAEGQEGEFALTRHIVGTKGYMAPEYLENGLVSTKLDVYAFGV 533
L+ L KIA+F +AR E + E+ + APE + G + K DV++FG+
Sbjct: 136 LVSDTLSCKIADFGLARLIE--DNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGI 193
Query: 534 LILEMLTGKEAAALHAEENNMHLSDVLNAVLTKEDGEESLRHFIDPTLQGNYPLELALLV 593
L+ E++T M +V+ + E G +R N P EL
Sbjct: 194 LLTEIVTHGRIPY-----PGMTNPEVIQNL---ERGYRMVR-------PDNCPEEL---- 234
Query: 594 IRLIDACLKKDPTDRPTMYEIEHSLSNILNA 624
+L+ C K+ P DRPT + L + A
Sbjct: 235 YQLMRLCWKERPEDRPTFDYLRSVLEDFFTA 265
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 63/262 (24%), Positives = 126/262 (48%), Gaps = 35/262 (13%)
Query: 372 FAAIK--------KVNGDVSKEIALLNKINHSNLIILSGVCFNEGNCYLVYEYAVNGTLS 423
F AIK K D E +++ + +H N+I L GV ++ E+ NG+L
Sbjct: 63 FVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNVIHLEGVVTKSTPVMIITEFMENGSLD 122
Query: 424 DWVFSNKNEGKYLDWKQRIQIALDVATGLNYLHSFTNPPHVHKDINSSNVLLDSDLRAKI 483
F +N+G++ Q + + +A G+ YL +VH+D+ + N+L++S+L K+
Sbjct: 123 S--FLRQNDGQFTV-IQLVGMLRGIAAGMKYLADMN---YVHRDLAARNILVNSNLVCKV 176
Query: 484 ANFAMARPAEGQEGEFALTRHIVGT--KGYMAPEYLENGLVSTKLDVYAFGVLILEMLTG 541
++F ++R E + T + G + APE ++ ++ DV+++G+++ E+++
Sbjct: 177 SDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSY 236
Query: 542 KEAAALHAEENNMHLSDVLNAVLTKEDGEESLRHFIDPTLQGNYPLELALLVIRLIDACL 601
E +M DV+NA+ E+ R + P P++ + +L+ C
Sbjct: 237 GERPYW-----DMTNQDVINAI------EQDYR--LPP------PMDCPSALHQLMLDCW 277
Query: 602 KKDPTDRPTMYEIEHSLSNILN 623
+KD RP +I ++L ++
Sbjct: 278 QKDRNHRPKFGQIVNTLDKMIR 299
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 63/252 (25%), Positives = 114/252 (45%), Gaps = 39/252 (15%)
Query: 381 DVSKEIALLNKINHSNLIILSGVCFNEGNCYLVYEYAVNGTLSDWVFSNKNEGKYLDWKQ 440
D +E ++ K++H L+ L GVC + LV+E+ +G LSD++ + + +
Sbjct: 48 DFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRG---LFAAET 104
Query: 441 RIQIALDVATGLNYLHSFTNPPHVHKDINSSNVLLDSDLRAKIANFAMARPAEGQEGEFA 500
+ + LDV G+ YL + +H+D+ + N L+ + K+++F M R F
Sbjct: 105 LLGMCLDVCEGMAYLEEASV---IHRDLAARNCLVGENQVIKVSDFGMTR--------FV 153
Query: 501 LTRHIVGTKG------YMAPEYLENGLVSTKLDVYAFGVLILEMLTGKEAAALHAEENNM 554
L + G + +PE S+K DV++FGVL+ E+ + E + +N
Sbjct: 154 LDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFS--EGKIPYENRSN- 210
Query: 555 HLSDVLNAVLTKEDGEESLRHFIDPTLQGNYPLELALLVIRLIDACLKKDPTDRPTMYEI 614
S+V+ ED R + P L + V ++++ C K+ P DRP +
Sbjct: 211 --SEVV------EDISTGFRLY-KPRLASTH-------VYQIMNHCWKERPEDRPAFSRL 254
Query: 615 EHSLSNILNASL 626
L+ I + L
Sbjct: 255 LRQLAAIAASGL 266
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 76/286 (26%), Positives = 122/286 (42%), Gaps = 60/286 (20%)
Query: 361 GSVYRG--KINGGFAAIKKVNGDVS------KEIALLNKINHSNLIILSGVCFNEGNCYL 412
G VY G K A+K + D KE A++ +I H NL+ L GVC E Y+
Sbjct: 25 GEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYI 84
Query: 413 VYEYAVNGTLSDWVFS-NKNEGKYLDWKQRIQIALDVATGLNYLHSFTNPPHVHKDINSS 471
+ E+ G L D++ N+ E + + +A +++ + YL +H+D+ +
Sbjct: 85 ITEFMTYGNLLDYLRECNRQEVSAV---VLLYMATQISSAMEYLE---KKNFIHRDLAAR 138
Query: 472 NVLLDSDLRAKIANFAMARPAEGQEGEFALTRHIVGTK---GYMAPEYLENGLVSTKLDV 528
N L+ + K+A+F ++R G T H G K + APE L S K DV
Sbjct: 139 NCLVGENHLVKVADFGLSRLMTGD----TFTAH-AGAKFPIKWTAPESLAYNKFSIKSDV 193
Query: 529 YAFGVLILEMLTGKEAAALHAEENNMHLSDVLNAVLTKEDGEESLRHFIDPT-----LQG 583
+AFGVL+ E+ T ++ G IDP+ L+
Sbjct: 194 WAFGVLLWEIAT---------------------YGMSPYPG-------IDPSQVYELLEK 225
Query: 584 NYPLE----LALLVIRLIDACLKKDPTDRPTMYEIEHSLSNILNAS 625
+Y +E V L+ AC + +P+DRP+ EI + + S
Sbjct: 226 DYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQES 271
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 76/286 (26%), Positives = 122/286 (42%), Gaps = 60/286 (20%)
Query: 361 GSVYRG--KINGGFAAIKKVNGDVS------KEIALLNKINHSNLIILSGVCFNEGNCYL 412
G VY G K A+K + D KE A++ +I H NL+ L GVC E Y+
Sbjct: 25 GEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYI 84
Query: 413 VYEYAVNGTLSDWVFS-NKNEGKYLDWKQRIQIALDVATGLNYLHSFTNPPHVHKDINSS 471
+ E+ G L D++ N+ E + + +A +++ + YL +H+D+ +
Sbjct: 85 IIEFMTYGNLLDYLRECNRQEVSAV---VLLYMATQISSAMEYLEKKN---FIHRDLAAR 138
Query: 472 NVLLDSDLRAKIANFAMARPAEGQEGEFALTRHIVGTK---GYMAPEYLENGLVSTKLDV 528
N L+ + K+A+F ++R G T H G K + APE L S K DV
Sbjct: 139 NCLVGENHLVKVADFGLSRLMTGD----TXTAH-AGAKFPIKWTAPESLAYNKFSIKSDV 193
Query: 529 YAFGVLILEMLTGKEAAALHAEENNMHLSDVLNAVLTKEDGEESLRHFIDPT-----LQG 583
+AFGVL+ E+ T ++ G IDP+ L+
Sbjct: 194 WAFGVLLWEIATYG---------------------MSPYPG-------IDPSQVYELLEK 225
Query: 584 NYPLE----LALLVIRLIDACLKKDPTDRPTMYEIEHSLSNILNAS 625
+Y +E V L+ AC + +P+DRP+ EI + + S
Sbjct: 226 DYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQES 271
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 71/264 (26%), Positives = 121/264 (45%), Gaps = 43/264 (16%)
Query: 374 AIKKVNGDVSKEIALLNKI-NHSNLIILSGVCFNEGNCYLVYEYAVNGTLSDWVFSNK-- 430
A K + D + E+ +L K+ +H N+I L G C + G YL EYA +G L D++ ++
Sbjct: 64 ASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVL 123
Query: 431 ----------NEGKYLDWKQRIQIALDVATGLNYLHSFTNPPHVHKDINSSNVLLDSDLR 480
+ L +Q + A DVA G++YL + +H+D+ + N+L+ +
Sbjct: 124 ETDPAFAIANSTASTLSSQQLLHFAADVARGMDYL---SQKQFIHRDLAARNILVGENYV 180
Query: 481 AKIANFAMARPAEGQEGEFALTRHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLILEM-- 538
AKIA+F ++R GQE T + + +MA E L + +T DV+++GVL+ E+
Sbjct: 181 AKIADFGLSR---GQEVYVKKTMGRLPVR-WMAIESLNYSVYTTNSDVWSYGVLLWEIVS 236
Query: 539 LTGKEAAALHAEENNMHLSDVLNAVLTKEDGEESLRHFIDPTLQGNYPLELALLVIRLID 598
L G + E L + + PL V L+
Sbjct: 237 LGGTPYCGMTCAE---------------------LYEKLPQGYRLEKPLNCDDEVYDLMR 275
Query: 599 ACLKKDPTDRPTMYEIEHSLSNIL 622
C ++ P +RP+ +I SL+ +L
Sbjct: 276 QCWREKPYERPSFAQILVSLNRML 299
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 55/180 (30%), Positives = 90/180 (50%), Gaps = 17/180 (9%)
Query: 374 AIKKVNGDVSKEIALLNKI-NHSNLIILSGVCFNEGNCYLVYEYAVNGTLSDWVFSNKNE 432
A +K D+ E+ ++ I H N+I L G C +G Y++ EYA G L +++ + +
Sbjct: 113 ATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPP 172
Query: 433 G------------KYLDWKQRIQIALDVATGLNYLHSFTNPPHVHKDINSSNVLLDSDLR 480
G + L K + A VA G+ YL S +H+D+ + NVL+ D
Sbjct: 173 GLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKC---IHRDLAARNVLVTEDNV 229
Query: 481 AKIANFAMARPAEGQEGEFALTRHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLILEMLT 540
KIA+F +AR + T + K +MAPE L + + + + DV++FGVL+ E+ T
Sbjct: 230 MKIADFGLARDIHHIDYYKKTTNGRLPVK-WMAPEALFDRIYTHQSDVWSFGVLLWEIFT 288
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 69/267 (25%), Positives = 128/267 (47%), Gaps = 37/267 (13%)
Query: 362 SVYRGKINGGFAAIKKVNGDVSKEIALLNKINHSNLIILSGVCFNEGNCYLVYEYAVNGT 421
S+ G G I+K + +E+ +++ +NH N++ L G+ N +V E+ G
Sbjct: 51 SLILGDSEGETEMIEKFQ-EFQREVFIMSNLNHPNIVKLYGLMHNPPR--MVMEFVPCGD 107
Query: 422 LSDWVFSNKNEGKYLDWKQRIQIALDVATGLNYLHSFTNPPHVHKDINSSNVLLDS---- 477
L + ++ + W ++++ LD+A G+ Y+ + NPP VH+D+ S N+ L S
Sbjct: 108 LYHRLL---DKAHPIKWSVKLRLMLDIALGIEYMQN-QNPPIVHRDLRSPNIFLQSLDEN 163
Query: 478 -DLRAKIANFAMARPAEGQEGEFALTRHIVGTKGYMAPEYL--ENGLVSTKLDVYAFGVL 534
+ AK+A+F+++ Q+ +++ ++G +MAPE + E + K D Y+F ++
Sbjct: 164 APVCAKVADFSLS-----QQSVHSVS-GLLGNFQWMAPETIGAEEESYTEKADTYSFAMI 217
Query: 535 ILEMLTGKEAAALHAEENNMHLSDVLNAVLTKEDGEESLRHFIDPTLQGNYPLELALLVI 594
+ +LTG+ +E + +N + EE LR PT+ + P L
Sbjct: 218 LYTILTGEGP----FDEYSYGKIKFINMIR-----EEGLR----PTIPEDCPPRLR---- 260
Query: 595 RLIDACLKKDPTDRPTMYEIEHSLSNI 621
+I+ C DP RP I LS +
Sbjct: 261 NVIELCWSGDPKKRPHFSYIVKELSEL 287
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 73/277 (26%), Positives = 119/277 (42%), Gaps = 42/277 (15%)
Query: 361 GSVYRG--KINGGFAAIKKVNGDVS------KEIALLNKINHSNLIILSGVCFNEGNCYL 412
G VY G K A+K + D KE A++ +I H NL+ L GVC E Y+
Sbjct: 29 GEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYI 88
Query: 413 VYEYAVNGTLSDWVFS-NKNEGKYLDWKQRIQIALDVATGLNYLHSFTNPPHVHKDINSS 471
+ E+ G L D++ N+ E ++ + +A +++ + YL +H+D+ +
Sbjct: 89 ITEFMTYGNLLDYLRECNRQE---VNAVVLLYMATQISSAMEYLEKKN---FIHRDLAAR 142
Query: 472 NVLLDSDLRAKIANFAMARPAEGQEGEFALTRHIVGTK---GYMAPEYLENGLVSTKLDV 528
N L+ + K+A+F ++R G T H G K + APE L S K DV
Sbjct: 143 NCLVGENHLVKVADFGLSRLMTGD----TYTAH-AGAKFPIKWTAPESLAYNKFSIKSDV 197
Query: 529 YAFGVLILEMLTGKEAAALHAEENNMHLSDVLNAVLTKEDGEESLRHFIDPTLQGNYPLE 588
+AFGVL+ E+ T + + LS V ++ + P
Sbjct: 198 WAFGVLLWEIATYGMSPY-----PGIDLSQVYE--------------LLEKDYRMERPEG 238
Query: 589 LALLVIRLIDACLKKDPTDRPTMYEIEHSLSNILNAS 625
V L+ AC + +P+DRP+ EI + + S
Sbjct: 239 CPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQES 275
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 73/277 (26%), Positives = 118/277 (42%), Gaps = 42/277 (15%)
Query: 361 GSVYRG--KINGGFAAIKKVNGDVS------KEIALLNKINHSNLIILSGVCFNEGNCYL 412
G VY G K A+K + D KE A++ +I H NL+ L GVC E Y+
Sbjct: 29 GEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYI 88
Query: 413 VYEYAVNGTLSDWVFS-NKNEGKYLDWKQRIQIALDVATGLNYLHSFTNPPHVHKDINSS 471
+ E+ G L D++ N+ E + + +A +++ + YL +H+D+ +
Sbjct: 89 ITEFMTYGNLLDYLRECNRQEVNAV---VLLYMATQISSAMEYLEKKN---FIHRDLAAR 142
Query: 472 NVLLDSDLRAKIANFAMARPAEGQEGEFALTRHIVGTK---GYMAPEYLENGLVSTKLDV 528
N L+ + K+A+F ++R G T H G K + APE L S K DV
Sbjct: 143 NCLVGENHLVKVADFGLSRLMTGD----TYTAH-AGAKFPIKWTAPESLAYNKFSIKSDV 197
Query: 529 YAFGVLILEMLTGKEAAALHAEENNMHLSDVLNAVLTKEDGEESLRHFIDPTLQGNYPLE 588
+AFGVL+ E+ T + + LS V ++ + P
Sbjct: 198 WAFGVLLWEIATYGMSPY-----PGIDLSQVYE--------------LLEKDYRMERPEG 238
Query: 589 LALLVIRLIDACLKKDPTDRPTMYEIEHSLSNILNAS 625
V L+ AC + +P+DRP+ EI + + S
Sbjct: 239 CPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQES 275
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 55/180 (30%), Positives = 90/180 (50%), Gaps = 17/180 (9%)
Query: 374 AIKKVNGDVSKEIALLNKI-NHSNLIILSGVCFNEGNCYLVYEYAVNGTLSDWVFSNKNE 432
A +K D+ E+ ++ I H N+I L G C +G Y++ EYA G L +++ + +
Sbjct: 57 ATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPP 116
Query: 433 G------------KYLDWKQRIQIALDVATGLNYLHSFTNPPHVHKDINSSNVLLDSDLR 480
G + L K + A VA G+ YL S +H+D+ + NVL+ D
Sbjct: 117 GLEYCYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKC---IHRDLAARNVLVTEDNV 173
Query: 481 AKIANFAMARPAEGQEGEFALTRHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLILEMLT 540
KIA+F +AR + T + K +MAPE L + + + + DV++FGVL+ E+ T
Sbjct: 174 MKIADFGLARDIHHIDYYKKTTNGRLPVK-WMAPEALFDRIYTHQSDVWSFGVLLWEIFT 232
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 62/252 (24%), Positives = 113/252 (44%), Gaps = 39/252 (15%)
Query: 381 DVSKEIALLNKINHSNLIILSGVCFNEGNCYLVYEYAVNGTLSDWVFSNKNEGKYLDWKQ 440
D +E ++ K++H L+ L GVC + LV+E+ +G LSD++ + + +
Sbjct: 51 DFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRG---LFAAET 107
Query: 441 RIQIALDVATGLNYLHSFTNPPHVHKDINSSNVLLDSDLRAKIANFAMARPAEGQEGEFA 500
+ + LDV G+ YL +H+D+ + N L+ + K+++F M R F
Sbjct: 108 LLGMCLDVCEGMAYLEEACV---IHRDLAARNCLVGENQVIKVSDFGMTR--------FV 156
Query: 501 LTRHIVGTKG------YMAPEYLENGLVSTKLDVYAFGVLILEMLTGKEAAALHAEENNM 554
L + G + +PE S+K DV++FGVL+ E+ + E + +N
Sbjct: 157 LDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFS--EGKIPYENRSN- 213
Query: 555 HLSDVLNAVLTKEDGEESLRHFIDPTLQGNYPLELALLVIRLIDACLKKDPTDRPTMYEI 614
S+V+ ED R + P L + V ++++ C ++ P DRP +
Sbjct: 214 --SEVV------EDISTGFRLY-KPRLASTH-------VYQIMNHCWRERPEDRPAFSRL 257
Query: 615 EHSLSNILNASL 626
L+ I + L
Sbjct: 258 LRQLAEIAESGL 269
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 63/239 (26%), Positives = 104/239 (43%), Gaps = 28/239 (11%)
Query: 384 KEIALLNKINHSNLIILSGVCFNEGNCYLVYEYAVNGTLSDWVFSNKNEGKYLDWKQRIQ 443
+E +L + +H N++ L GVC + Y+V E G D++ + EG L K +Q
Sbjct: 161 QEARILKQYSHPNIVRLIGVCTQKQPIYIVMELVQGG---DFLTFLRTEGARLRVKTLLQ 217
Query: 444 IALDVATGLNYLHSFTNPPHVHKDINSSNVLLDSDLRAKIANFAMAR-PAEGQEGEFALT 502
+ D A G+ YL S +H+D+ + N L+ KI++F M+R A+G
Sbjct: 218 MVGDAAAGMEYLESKCC---IHRDLAARNCLVTEKNVLKISDFGMSREEADGVXAASGGL 274
Query: 503 RHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLILEMLTGKEAAALHAEENNMHLSDVLNA 562
R + + APE L G S++ DV++FG+L+ E + L A
Sbjct: 275 RQV--PVKWTAPEALNYGRYSSESDVWSFGILLWETFS-------------------LGA 313
Query: 563 VLTKEDGEESLRHFIDPTLQGNYPLELALLVIRLIDACLKKDPTDRPTMYEIEHSLSNI 621
+ R F++ + P V RL++ C +P RP+ I L +I
Sbjct: 314 SPYPNLSNQQTREFVEKGGRLPCPELCPDAVFRLMEQCWAYEPGQRPSFSTIYQELQSI 372
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 55/180 (30%), Positives = 90/180 (50%), Gaps = 17/180 (9%)
Query: 374 AIKKVNGDVSKEIALLNKI-NHSNLIILSGVCFNEGNCYLVYEYAVNGTLSDWVFSNKNE 432
A +K D+ E+ ++ I H N+I L G C +G Y++ EYA G L +++ + +
Sbjct: 65 ATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPP 124
Query: 433 G------------KYLDWKQRIQIALDVATGLNYLHSFTNPPHVHKDINSSNVLLDSDLR 480
G + L K + A VA G+ YL S +H+D+ + NVL+ D
Sbjct: 125 GLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKC---IHRDLAARNVLVTEDNV 181
Query: 481 AKIANFAMARPAEGQEGEFALTRHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLILEMLT 540
KIA+F +AR + T + K +MAPE L + + + + DV++FGVL+ E+ T
Sbjct: 182 MKIADFGLARDIHHIDYYKKTTNGRLPVK-WMAPEALFDRIYTHQSDVWSFGVLLWEIFT 240
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 55/180 (30%), Positives = 90/180 (50%), Gaps = 17/180 (9%)
Query: 374 AIKKVNGDVSKEIALLNKI-NHSNLIILSGVCFNEGNCYLVYEYAVNGTLSDWVFSNKNE 432
A +K D+ E+ ++ I H N+I L G C +G Y++ EYA G L +++ + +
Sbjct: 61 ATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPP 120
Query: 433 G------------KYLDWKQRIQIALDVATGLNYLHSFTNPPHVHKDINSSNVLLDSDLR 480
G + L K + A VA G+ YL S +H+D+ + NVL+ D
Sbjct: 121 GLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKC---IHRDLAARNVLVTEDNV 177
Query: 481 AKIANFAMARPAEGQEGEFALTRHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLILEMLT 540
KIA+F +AR + T + K +MAPE L + + + + DV++FGVL+ E+ T
Sbjct: 178 MKIADFGLARDIHHIDYYKKTTNGRLPVK-WMAPEALFDRIYTHQSDVWSFGVLLWEIFT 236
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 55/180 (30%), Positives = 90/180 (50%), Gaps = 17/180 (9%)
Query: 374 AIKKVNGDVSKEIALLNKI-NHSNLIILSGVCFNEGNCYLVYEYAVNGTLSDWVFSNKNE 432
A +K D+ E+ ++ I H N+I L G C +G Y++ EYA G L +++ + +
Sbjct: 64 ATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPP 123
Query: 433 G------------KYLDWKQRIQIALDVATGLNYLHSFTNPPHVHKDINSSNVLLDSDLR 480
G + L K + A VA G+ YL S +H+D+ + NVL+ D
Sbjct: 124 GLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKC---IHRDLAARNVLVTEDNV 180
Query: 481 AKIANFAMARPAEGQEGEFALTRHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLILEMLT 540
KIA+F +AR + T + K +MAPE L + + + + DV++FGVL+ E+ T
Sbjct: 181 MKIADFGLARDIHHIDYYKKTTNGRLPVK-WMAPEALFDRIYTHQSDVWSFGVLLWEIFT 239
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 55/180 (30%), Positives = 90/180 (50%), Gaps = 17/180 (9%)
Query: 374 AIKKVNGDVSKEIALLNKI-NHSNLIILSGVCFNEGNCYLVYEYAVNGTLSDWVFSNKNE 432
A +K D+ E+ ++ I H N+I L G C +G Y++ EYA G L +++ + +
Sbjct: 72 ATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPP 131
Query: 433 G------------KYLDWKQRIQIALDVATGLNYLHSFTNPPHVHKDINSSNVLLDSDLR 480
G + L K + A VA G+ YL S +H+D+ + NVL+ D
Sbjct: 132 GLEYCYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKC---IHRDLAARNVLVTEDNV 188
Query: 481 AKIANFAMARPAEGQEGEFALTRHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLILEMLT 540
KIA+F +AR + T + K +MAPE L + + + + DV++FGVL+ E+ T
Sbjct: 189 MKIADFGLARDIHHIDYYKKTTNGRLPVK-WMAPEALFDRIYTHQSDVWSFGVLLWEIFT 247
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 55/180 (30%), Positives = 90/180 (50%), Gaps = 17/180 (9%)
Query: 374 AIKKVNGDVSKEIALLNKI-NHSNLIILSGVCFNEGNCYLVYEYAVNGTLSDWVFSNKNE 432
A +K D+ E+ ++ I H N+I L G C +G Y++ EYA G L +++ + +
Sbjct: 72 ATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPP 131
Query: 433 G------------KYLDWKQRIQIALDVATGLNYLHSFTNPPHVHKDINSSNVLLDSDLR 480
G + L K + A VA G+ YL S +H+D+ + NVL+ D
Sbjct: 132 GLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKC---IHRDLAARNVLVTEDNV 188
Query: 481 AKIANFAMARPAEGQEGEFALTRHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLILEMLT 540
KIA+F +AR + T + K +MAPE L + + + + DV++FGVL+ E+ T
Sbjct: 189 MKIADFGLARDIHHIDYYKKTTNGRLPVK-WMAPEALFDRIYTHQSDVWSFGVLLWEIFT 247
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 69/267 (25%), Positives = 127/267 (47%), Gaps = 37/267 (13%)
Query: 362 SVYRGKINGGFAAIKKVNGDVSKEIALLNKINHSNLIILSGVCFNEGNCYLVYEYAVNGT 421
S+ G G I+K + +E+ +++ +NH N++ L G+ N +V E+ G
Sbjct: 51 SLILGDSEGETEMIEKFQ-EFQREVFIMSNLNHPNIVKLYGLMHNPPR--MVMEFVPCGD 107
Query: 422 LSDWVFSNKNEGKYLDWKQRIQIALDVATGLNYLHSFTNPPHVHKDINSSNVLLDS---- 477
L + ++ + W ++++ LD+A G+ Y+ + NPP VH+D+ S N+ L S
Sbjct: 108 LYHRLL---DKAHPIKWSVKLRLMLDIALGIEYMQN-QNPPIVHRDLRSPNIFLQSLDEN 163
Query: 478 -DLRAKIANFAMARPAEGQEGEFALTRHIVGTKGYMAPEYL--ENGLVSTKLDVYAFGVL 534
+ AK+A+F ++ Q+ +++ ++G +MAPE + E + K D Y+F ++
Sbjct: 164 APVCAKVADFGLS-----QQSVHSVS-GLLGNFQWMAPETIGAEEESYTEKADTYSFAMI 217
Query: 535 ILEMLTGKEAAALHAEENNMHLSDVLNAVLTKEDGEESLRHFIDPTLQGNYPLELALLVI 594
+ +LTG+ +E + +N + EE LR PT+ + P L
Sbjct: 218 LYTILTGEGP----FDEYSYGKIKFINMIR-----EEGLR----PTIPEDCPPRLR---- 260
Query: 595 RLIDACLKKDPTDRPTMYEIEHSLSNI 621
+I+ C DP RP I LS +
Sbjct: 261 NVIELCWSGDPKKRPHFSYIVKELSEL 287
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 46/157 (29%), Positives = 80/157 (50%), Gaps = 7/157 (4%)
Query: 384 KEIALLNKINHSNLIILSGVCFNEGNCYLVYEYAVNGTLSDWVFSNKNEGKYLDWKQRIQ 443
+E L+ + H L+ L V E Y++ EY G+L D F +EG + + I
Sbjct: 57 EEANLMKTLQHDKLVRLYAVVTREEPIYIITEYMAKGSLLD--FLKSDEGGKVLLPKLID 114
Query: 444 IALDVATGLNYLHSFTNPPHVHKDINSSNVLLDSDLRAKIANFAMARPAEGQEGEFALTR 503
+ +A G+ Y+ ++H+D+ ++NVL+ L KIA+F +AR E + E+
Sbjct: 115 FSAQIAEGMAYIERKN---YIHRDLRAANVLVSESLMCKIADFGLARVIE--DNEYTARE 169
Query: 504 HIVGTKGYMAPEYLENGLVSTKLDVYAFGVLILEMLT 540
+ APE + G + K DV++FG+L+ E++T
Sbjct: 170 GAKFPIKWTAPEAINFGCFTIKSDVWSFGILLYEIVT 206
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 76/286 (26%), Positives = 122/286 (42%), Gaps = 60/286 (20%)
Query: 361 GSVYRG--KINGGFAAIKKVNGDVS------KEIALLNKINHSNLIILSGVCFNEGNCYL 412
G VY G K A+K + D KE A++ +I H NL+ L GVC E Y+
Sbjct: 25 GEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYI 84
Query: 413 VYEYAVNGTLSDWVFS-NKNEGKYLDWKQRIQIALDVATGLNYLHSFTNPPHVHKDINSS 471
+ E+ G L D++ N+ E + + +A +++ + YL +H+D+ +
Sbjct: 85 ITEFMTYGNLLDYLRECNRQEVSAV---VLLYMATQISSAMEYLE---KKNFIHRDLAAR 138
Query: 472 NVLLDSDLRAKIANFAMARPAEGQEGEFALTRHIVGTK---GYMAPEYLENGLVSTKLDV 528
N L+ + K+A+F ++R G T H G K + APE L S K DV
Sbjct: 139 NCLVGENHLVKVADFGLSRLMTGD----TXTAH-AGAKFPIKWTAPESLAYNKFSIKSDV 193
Query: 529 YAFGVLILEMLTGKEAAALHAEENNMHLSDVLNAVLTKEDGEESLRHFIDPT-----LQG 583
+AFGVL+ E+ T ++ G IDP+ L+
Sbjct: 194 WAFGVLLWEIAT---------------------YGMSPYPG-------IDPSQVYELLEK 225
Query: 584 NYPLE----LALLVIRLIDACLKKDPTDRPTMYEIEHSLSNILNAS 625
+Y +E V L+ AC + +P+DRP+ EI + + S
Sbjct: 226 DYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQES 271
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 72/275 (26%), Positives = 117/275 (42%), Gaps = 42/275 (15%)
Query: 361 GSVYRG--KINGGFAAIKKVNGDVS------KEIALLNKINHSNLIILSGVCFNEGNCYL 412
G VY G K A+K + D KE A++ +I H NL+ L GVC E Y+
Sbjct: 32 GEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYI 91
Query: 413 VYEYAVNGTLSDWVFS-NKNEGKYLDWKQRIQIALDVATGLNYLHSFTNPPHVHKDINSS 471
+ E+ G L D++ N+ E + + +A +++ + YL +H+D+ +
Sbjct: 92 IIEFMTYGNLLDYLRECNRQEVNAV---VLLYMATQISSAMEYLEKKN---FIHRDLAAR 145
Query: 472 NVLLDSDLRAKIANFAMARPAEGQEGEFALTRHIVGTK---GYMAPEYLENGLVSTKLDV 528
N L+ + K+A+F ++R G T H G K + APE L S K DV
Sbjct: 146 NCLVGENHLVKVADFGLSRLMTGD----TYTAH-AGAKFPIKWTAPESLAYNKFSIKSDV 200
Query: 529 YAFGVLILEMLTGKEAAALHAEENNMHLSDVLNAVLTKEDGEESLRHFIDPTLQGNYPLE 588
+AFGVL+ E+ T + + LS V ++ + P
Sbjct: 201 WAFGVLLWEIATYGMSPY-----PGIDLSQVYE--------------LLEKDYRMERPEG 241
Query: 589 LALLVIRLIDACLKKDPTDRPTMYEIEHSLSNILN 623
V L+ AC + +P+DRP+ EI + +
Sbjct: 242 CPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQ 276
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 72/275 (26%), Positives = 117/275 (42%), Gaps = 42/275 (15%)
Query: 361 GSVYRG--KINGGFAAIKKVNGDVS------KEIALLNKINHSNLIILSGVCFNEGNCYL 412
G VY G K A+K + D KE A++ +I H NL+ L GVC E Y+
Sbjct: 32 GEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYI 91
Query: 413 VYEYAVNGTLSDWVFS-NKNEGKYLDWKQRIQIALDVATGLNYLHSFTNPPHVHKDINSS 471
+ E+ G L D++ N+ E + + +A +++ + YL +H+D+ +
Sbjct: 92 ITEFMTYGNLLDYLRECNRQEVNAV---VLLYMATQISSAMEYLEKKN---FIHRDLAAR 145
Query: 472 NVLLDSDLRAKIANFAMARPAEGQEGEFALTRHIVGTK---GYMAPEYLENGLVSTKLDV 528
N L+ + K+A+F ++R G T H G K + APE L S K DV
Sbjct: 146 NCLVGENHLVKVADFGLSRLMTGD----TYTAH-AGAKFPIKWTAPESLAYNKFSIKSDV 200
Query: 529 YAFGVLILEMLTGKEAAALHAEENNMHLSDVLNAVLTKEDGEESLRHFIDPTLQGNYPLE 588
+AFGVL+ E+ T + + LS V ++ + P
Sbjct: 201 WAFGVLLWEIATYGMSPY-----PGIDLSQVYE--------------LLEKDYRMERPEG 241
Query: 589 LALLVIRLIDACLKKDPTDRPTMYEIEHSLSNILN 623
V L+ AC + +P+DRP+ EI + +
Sbjct: 242 CPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQ 276
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 57/194 (29%), Positives = 95/194 (48%), Gaps = 24/194 (12%)
Query: 361 GSVYRGK--INGGFAAIKKVN----------GDVSKEIALLNKINHSNLIILSGVCFNEG 408
G V GK + G A+K +N G + +EI L H ++I L V
Sbjct: 30 GKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKLYQVISTPS 89
Query: 409 NCYLVYEYAVNGTLSDWVFSNKNEGKYLDWKQRIQIALDVATGLNYLHSFTNPPHVHKDI 468
+ ++V EY G L D++ N LD K+ ++ + +G++Y H VH+D+
Sbjct: 90 DIFMVMEYVSGGELFDYICKNGR----LDEKESRRLFQQILSGVDYCHRHMV---VHRDL 142
Query: 469 NSSNVLLDSDLRAKIANFAMARPAEGQEGEFALTRHIVGTKGYMAPEYLENGLVS-TKLD 527
NVLLD+ + AKIA+F ++ +GEF R G+ Y APE + L + ++D
Sbjct: 143 KPENVLLDAHMNAKIADFGLSNMM--SDGEF--LRXSCGSPNYAAPEVISGRLYAGPEVD 198
Query: 528 VYAFGVLILEMLTG 541
+++ GV++ +L G
Sbjct: 199 IWSSGVILYALLCG 212
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 76.3 bits (186), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 72/272 (26%), Positives = 122/272 (44%), Gaps = 34/272 (12%)
Query: 361 GSVYRGKINGGF-AAIKKVN-GDVS-----KEIALLNKINHSNLIILSGVCFNEGNCYLV 413
G V+ G NG A+K + G +S E L+ ++ H L+ L V E Y++
Sbjct: 23 GEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQE-PIYII 81
Query: 414 YEYAVNGTLSDWVFSNKNEGKYLDWKQRIQIALDVATGLNYLHSFTNPPHVHKDINSSNV 473
EY NG+L D F G L + + +A +A G+ ++ ++H+++ ++N+
Sbjct: 82 TEYMENGSLVD--FLKTPSGIKLTINKLLDMAAQIAEGMAFIEERN---YIHRNLRAANI 136
Query: 474 LLDSDLRAKIANFAMARPAEGQEGEFALTRHIVGTKGYMAPEYLENGLVSTKLDVYAFGV 533
L+ L KIA+F +AR E + E+ + APE + G + K DV++FG+
Sbjct: 137 LVSDTLSCKIADFGLARLIE--DNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGI 194
Query: 534 LILEMLTGKEAAALHAEENNMHLSDVLNAVLTKEDGEESLRHFIDPTLQGNYPLELALLV 593
L+ E++T M +V+ + E G +R N P EL
Sbjct: 195 LLTEIVTHGRIPY-----PGMTNPEVIQNL---ERGYRMVR-------PDNCPEEL---- 235
Query: 594 IRLIDACLKKDPTDRPTMYEIEHSLSNILNAS 625
+L+ C K+ P DRPT + L + A+
Sbjct: 236 YQLMRLCWKERPEDRPTFDYLRSVLEDFFTAT 267
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 62/245 (25%), Positives = 109/245 (44%), Gaps = 42/245 (17%)
Query: 377 KVNGDVSKEIALLNKINHSNLIILSGVCFNEGNCYLVYEYAVNGTLSDWVFSNK----NE 432
K + +E+A+L + H N++ G+ Y+V +Y G L + + K E
Sbjct: 65 KEREESRREVAVLANMKHPNIVQYRESFEENGSLYIVMDYCEGGDLFKRINAQKGVLFQE 124
Query: 433 GKYLDWKQRIQIALDVATGLNYLHSFTNPPHVHKDINSSNVLLDSDLRAKIANFAMARPA 492
+ LDW +QI L L ++H + +H+DI S N+ L D ++ +F +AR
Sbjct: 125 DQILDW--FVQICL----ALKHVH---DRKILHRDIKSQNIFLTKDGTVQLGDFGIARVL 175
Query: 493 EGQEGEFALTRHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLILEMLTGKEAAALHAEEN 552
L R +GT Y++PE EN + K D++A G ++ E+ T K HA E
Sbjct: 176 NST---VELARACIGTPYYLSPEICENKPYNNKSDIWALGCVLYELCTLK-----HAFEA 227
Query: 553 NMHLSDVLNAVLTKEDGEESLRHFIDPTLQGNYP---LELALLVIRLIDACLKKDPTDRP 609
S+++ + + G++P L + + L+ K++P DRP
Sbjct: 228 G------------------SMKNLVLKIISGSFPPVSLHYSYDLRSLVSQLFKRNPRDRP 269
Query: 610 TMYEI 614
++ I
Sbjct: 270 SVNSI 274
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 55/180 (30%), Positives = 90/180 (50%), Gaps = 17/180 (9%)
Query: 374 AIKKVNGDVSKEIALLNKI-NHSNLIILSGVCFNEGNCYLVYEYAVNGTLSDWVFSNKNE 432
A +K D+ E+ ++ I H N+I L G C +G Y++ EYA G L +++ + +
Sbjct: 72 ATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQAREPP 131
Query: 433 G------------KYLDWKQRIQIALDVATGLNYLHSFTNPPHVHKDINSSNVLLDSDLR 480
G + L K + A VA G+ YL S +H+D+ + NVL+ D
Sbjct: 132 GLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKC---IHRDLAARNVLVTEDNV 188
Query: 481 AKIANFAMARPAEGQEGEFALTRHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLILEMLT 540
KIA+F +AR + T + K +MAPE L + + + + DV++FGVL+ E+ T
Sbjct: 189 MKIADFGLARDIHHIDYYKKTTNGRLPVK-WMAPEALFDRIYTHQSDVWSFGVLLWEIFT 247
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 47/180 (26%), Positives = 88/180 (48%), Gaps = 15/180 (8%)
Query: 370 GGFAAIKKVNG-------DVSKEIALLNKINHSNLIILSGVCFNEG--NCYLVYEYAVNG 420
G A+KK+ D +EI +L + H N++ GVC++ G N L+ EY G
Sbjct: 70 GEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYG 129
Query: 421 TLSDWVFSNKNEGKYLDWKQRIQIALDVATGLNYLHSFTNPPHVHKDINSSNVLLDSDLR 480
+L D++ +K +D + +Q + G+ YL + ++H+D+ + N+L++++ R
Sbjct: 130 SLRDYLQKHKER---IDHIKLLQYTSQICKGMEYLGT---KRYIHRDLATRNILVENENR 183
Query: 481 AKIANFAMARPAEGQEGEFALTRHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLILEMLT 540
KI +F + + + + + APE L S DV++FGV++ E+ T
Sbjct: 184 VKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 243
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 75.5 bits (184), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 58/238 (24%), Positives = 113/238 (47%), Gaps = 24/238 (10%)
Query: 306 SGSFQANEKPSNKKFDEESQDFLESI-SGVAQSLKVYSFKELQSATDNFSFTCRIQGSVY 364
SG+F+ + P+ +F+E FL+ + G S+++ + LQ T ++Q S
Sbjct: 1 SGAFE-DRDPT--QFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHST- 56
Query: 365 RGKINGGFAAIKKVNGDVSKEIALLNKINHSNLIILSGVCFNEG--NCYLVYEYAVNGTL 422
++ D +EI +L + H N++ GVC++ G N L+ EY G+L
Sbjct: 57 -----------EEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSL 105
Query: 423 SDWVFSNKNEGKYLDWKQRIQIALDVATGLNYLHSFTNPPHVHKDINSSNVLLDSDLRAK 482
D++ +K +D + +Q + G+ YL + ++H+D+ + N+L++++ R K
Sbjct: 106 RDYLQKHKER---IDHIKLLQYTSQICKGMEYLGT---KRYIHRDLATRNILVENENRVK 159
Query: 483 IANFAMARPAEGQEGEFALTRHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLILEMLT 540
I +F + + + + + APE L S DV++FGV++ E+ T
Sbjct: 160 IGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 217
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 75.5 bits (184), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 58/237 (24%), Positives = 109/237 (45%), Gaps = 21/237 (8%)
Query: 307 GSFQANEKPSNKKFDEESQDFLESI-SGVAQSLKVYSFKELQSATDNFSFTCRIQGSVYR 365
GS A E +F+E FL+ + G S+++ + LQ T ++Q S
Sbjct: 1 GSSGAFEDRDPTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHST-- 58
Query: 366 GKINGGFAAIKKVNGDVSKEIALLNKINHSNLIILSGVCFNEG--NCYLVYEYAVNGTLS 423
++ D +EI +L + H N++ GVC++ G N L+ EY G+L
Sbjct: 59 ----------EEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLR 108
Query: 424 DWVFSNKNEGKYLDWKQRIQIALDVATGLNYLHSFTNPPHVHKDINSSNVLLDSDLRAKI 483
D++ +K +D + +Q + G+ YL + ++H+D+ + N+L++++ R KI
Sbjct: 109 DYLQKHKER---IDHIKLLQYTSQICKGMEYLGT---KRYIHRDLATRNILVENENRVKI 162
Query: 484 ANFAMARPAEGQEGEFALTRHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLILEMLT 540
+F + + + + + APE L S DV++FGV++ E+ T
Sbjct: 163 GDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 219
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 75.5 bits (184), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 68/269 (25%), Positives = 127/269 (47%), Gaps = 42/269 (15%)
Query: 361 GSVYRGKINGGFAAIKKVN---------GDVSKEIALLNKINHSNLIILSGVCFNEGNCY 411
G+VY+GK +G A+K +N E+ +L K H N+++ G +
Sbjct: 38 GTVYKGKWHGD-VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS-TKPQLA 95
Query: 412 LVYEYAVNGTLSDWVFSNKNEGKYLDWKQRIQIALDVATGLNYLHSFTNPPHVHKDINSS 471
+V ++ +L + +++ + + K+ I IA A G++YLH+ + +H+D+ S+
Sbjct: 96 IVTQWCEGSSLYHHLHASETK---FEMKKLIDIARQTARGMDYLHAKSI---IHRDLKSN 149
Query: 472 NVLLDSDLRAKIANFAMARPAEGQEGEFALTRHIVGTKGYMAPEYL---ENGLVSTKLDV 528
N+ L D KI +F +A G + + G+ +MAPE + ++ S + DV
Sbjct: 150 NIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQ-LSGSILWMAPEVIRMQDSNPYSFQSDV 208
Query: 529 YAFGVLILEMLTGKEAAALHAEENNMHLSDVLNAVLTKEDGEESLRHFIDPTL---QGNY 585
YAFG+++ E++TG+ + N++ D + ++ R + P L + N
Sbjct: 209 YAFGIVLYELMTGQLPYS------NINNRDQIIEMVG--------RGSLSPDLSKVRSNC 254
Query: 586 PLELALLVIRLIDACLKKDPTDRPTMYEI 614
P + RL+ CLKK +RP+ I
Sbjct: 255 PKRMK----RLMAECLKKKRDERPSFPRI 279
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 75.5 bits (184), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 62/248 (25%), Positives = 117/248 (47%), Gaps = 25/248 (10%)
Query: 376 KKVNGDVSKEIALLNKINHSNLIILSGVCFNEGNCYLVYEYAVNGTLSDWVFSNKNEGKY 435
+K D E +++ + +H N+I L GV +V EY NG+L F KN+G++
Sbjct: 64 EKQRRDFLGEASIMGQFDHPNIIHLEGVVTKSKPVMIVTEYMENGSLD--TFLKKNDGQF 121
Query: 436 LDWKQRIQIALDVATGLNYLHSFTNPPHVHKDINSSNVLLDSDLRAKIANFAMARPAEGQ 495
Q + + ++ G+ YL +VH+D+ + N+L++S+L K+++F ++R E
Sbjct: 122 TV-IQLVGMLRGISAGMKYLSDMG---YVHRDLAARNILINSNLVCKVSDFGLSRVLEDD 177
Query: 496 EGEFALTRHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLILEMLTGKEAAALHAEENNMH 555
TR + APE + ++ DV+++G+++ E+++ E M
Sbjct: 178 PEAAYTTRGGKIPIRWTAPEAIAFRKFTSASDVWSYGIVMWEVVSYGERPYWE-----MT 232
Query: 556 LSDVLNAVLTKEDGEESLRHFIDPTLQGNYPLELALLVIRLIDACLKKDPTDRPTMYEIE 615
DV+ AV EE R P+ P++ + +L+ C +K+ RP EI
Sbjct: 233 NQDVIKAV------EEGYRL---PS-----PMDCPAALYQLMLDCWQKERNSRPKFDEIV 278
Query: 616 HSLSNILN 623
+ L ++
Sbjct: 279 NMLDKLIR 286
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 75.5 bits (184), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 47/180 (26%), Positives = 88/180 (48%), Gaps = 15/180 (8%)
Query: 370 GGFAAIKKVNG-------DVSKEIALLNKINHSNLIILSGVCFNEG--NCYLVYEYAVNG 420
G A+KK+ D +EI +L + H N++ GVC++ G N L+ EY G
Sbjct: 37 GEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYG 96
Query: 421 TLSDWVFSNKNEGKYLDWKQRIQIALDVATGLNYLHSFTNPPHVHKDINSSNVLLDSDLR 480
+L D++ +K +D + +Q + G+ YL + ++H+D+ + N+L++++ R
Sbjct: 97 SLRDYLQKHKER---IDHIKLLQYTSQICKGMEYLGT---KRYIHRDLATRNILVENENR 150
Query: 481 AKIANFAMARPAEGQEGEFALTRHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLILEMLT 540
KI +F + + + + + APE L S DV++FGV++ E+ T
Sbjct: 151 VKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 210
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 75.5 bits (184), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 47/180 (26%), Positives = 88/180 (48%), Gaps = 15/180 (8%)
Query: 370 GGFAAIKKVN-------GDVSKEIALLNKINHSNLIILSGVCFNEG--NCYLVYEYAVNG 420
G A+KK+ D +EI +L + H N++ GVC++ G N L+ EY G
Sbjct: 43 GEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYG 102
Query: 421 TLSDWVFSNKNEGKYLDWKQRIQIALDVATGLNYLHSFTNPPHVHKDINSSNVLLDSDLR 480
+L D++ +K +D + +Q + G+ YL + ++H+D+ + N+L++++ R
Sbjct: 103 SLRDYLQKHKER---IDHIKLLQYTSQICKGMEYLGT---KRYIHRDLATRNILVENENR 156
Query: 481 AKIANFAMARPAEGQEGEFALTRHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLILEMLT 540
KI +F + + + + + APE L S DV++FGV++ E+ T
Sbjct: 157 VKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 216
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 75.5 bits (184), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 72/274 (26%), Positives = 117/274 (42%), Gaps = 42/274 (15%)
Query: 361 GSVYRG--KINGGFAAIKKVNGDVS------KEIALLNKINHSNLIILSGVCFNEGNCYL 412
G VY G K A+K + D KE A++ +I H NL+ L GVC E Y+
Sbjct: 27 GEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYI 86
Query: 413 VYEYAVNGTLSDWVFS-NKNEGKYLDWKQRIQIALDVATGLNYLHSFTNPPHVHKDINSS 471
+ E+ G L D++ N+ E + + +A +++ + YL +H+D+ +
Sbjct: 87 ITEFMTYGNLLDYLRECNRQEVNAV---VLLYMATQISSAMEYLEKKN---FIHRDLAAR 140
Query: 472 NVLLDSDLRAKIANFAMARPAEGQEGEFALTRHIVGTK---GYMAPEYLENGLVSTKLDV 528
N L+ + K+A+F ++R G T H G K + APE L S K DV
Sbjct: 141 NCLVGENHLVKVADFGLSRLMTGD----TYTAH-AGAKFPIKWTAPESLAYNKFSIKSDV 195
Query: 529 YAFGVLILEMLTGKEAAALHAEENNMHLSDVLNAVLTKEDGEESLRHFIDPTLQGNYPLE 588
+AFGVL+ E+ T + + LS V ++ + P
Sbjct: 196 WAFGVLLWEIATYGMSPY-----PGIDLSQVYE--------------LLEKDYRMERPEG 236
Query: 589 LALLVIRLIDACLKKDPTDRPTMYEIEHSLSNIL 622
V L+ AC + +P+DRP+ EI + +
Sbjct: 237 CPEKVYELMRACWQWNPSDRPSFAEIHQAFETMF 270
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 75.5 bits (184), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 47/180 (26%), Positives = 88/180 (48%), Gaps = 15/180 (8%)
Query: 370 GGFAAIKKVNG-------DVSKEIALLNKINHSNLIILSGVCFNEG--NCYLVYEYAVNG 420
G A+KK+ D +EI +L + H N++ GVC++ G N L+ EY G
Sbjct: 38 GEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYG 97
Query: 421 TLSDWVFSNKNEGKYLDWKQRIQIALDVATGLNYLHSFTNPPHVHKDINSSNVLLDSDLR 480
+L D++ +K +D + +Q + G+ YL + ++H+D+ + N+L++++ R
Sbjct: 98 SLRDYLQKHKER---IDHIKLLQYTSQICKGMEYLGT---KRYIHRDLATRNILVENENR 151
Query: 481 AKIANFAMARPAEGQEGEFALTRHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLILEMLT 540
KI +F + + + + + APE L S DV++FGV++ E+ T
Sbjct: 152 VKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 211
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 75.5 bits (184), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 47/180 (26%), Positives = 88/180 (48%), Gaps = 15/180 (8%)
Query: 370 GGFAAIKKVNG-------DVSKEIALLNKINHSNLIILSGVCFNEG--NCYLVYEYAVNG 420
G A+KK+ D +EI +L + H N++ GVC++ G N L+ EY G
Sbjct: 39 GEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYG 98
Query: 421 TLSDWVFSNKNEGKYLDWKQRIQIALDVATGLNYLHSFTNPPHVHKDINSSNVLLDSDLR 480
+L D++ +K +D + +Q + G+ YL + ++H+D+ + N+L++++ R
Sbjct: 99 SLRDYLQKHKER---IDHIKLLQYTSQICKGMEYLGT---KRYIHRDLATRNILVENENR 152
Query: 481 AKIANFAMARPAEGQEGEFALTRHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLILEMLT 540
KI +F + + + + + APE L S DV++FGV++ E+ T
Sbjct: 153 VKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 212
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 47/180 (26%), Positives = 88/180 (48%), Gaps = 15/180 (8%)
Query: 370 GGFAAIKKVNG-------DVSKEIALLNKINHSNLIILSGVCFNEG--NCYLVYEYAVNG 420
G A+KK+ D +EI +L + H N++ GVC++ G N L+ EY G
Sbjct: 39 GEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYG 98
Query: 421 TLSDWVFSNKNEGKYLDWKQRIQIALDVATGLNYLHSFTNPPHVHKDINSSNVLLDSDLR 480
+L D++ +K +D + +Q + G+ YL + ++H+D+ + N+L++++ R
Sbjct: 99 SLRDYLQKHKER---IDHIKLLQYTSQICKGMEYLGT---KRYIHRDLATRNILVENENR 152
Query: 481 AKIANFAMARPAEGQEGEFALTRHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLILEMLT 540
KI +F + + + + + APE L S DV++FGV++ E+ T
Sbjct: 153 VKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 212
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 69/267 (25%), Positives = 126/267 (47%), Gaps = 37/267 (13%)
Query: 362 SVYRGKINGGFAAIKKVNGDVSKEIALLNKINHSNLIILSGVCFNEGNCYLVYEYAVNGT 421
S+ G G I+K + +E+ +++ +NH N++ L G+ N +V E+ G
Sbjct: 51 SLILGDSEGETEMIEKFQ-EFQREVFIMSNLNHPNIVKLYGLMHNPPR--MVMEFVPCGD 107
Query: 422 LSDWVFSNKNEGKYLDWKQRIQIALDVATGLNYLHSFTNPPHVHKDINSSNVLLDS---- 477
L + ++ + W ++++ LD+A G+ Y+ + NPP VH+D+ S N+ L S
Sbjct: 108 LYHRLL---DKAHPIKWSVKLRLMLDIALGIEYMQN-QNPPIVHRDLRSPNIFLQSLDEN 163
Query: 478 -DLRAKIANFAMARPAEGQEGEFALTRHIVGTKGYMAPEYL--ENGLVSTKLDVYAFGVL 534
+ AK+A+F + Q+ +++ ++G +MAPE + E + K D Y+F ++
Sbjct: 164 APVCAKVADFGTS-----QQSVHSVS-GLLGNFQWMAPETIGAEEESYTEKADTYSFAMI 217
Query: 535 ILEMLTGKEAAALHAEENNMHLSDVLNAVLTKEDGEESLRHFIDPTLQGNYPLELALLVI 594
+ +LTG+ +E + +N + EE LR PT+ + P L
Sbjct: 218 LYTILTGEGP----FDEYSYGKIKFINMIR-----EEGLR----PTIPEDCPPRLR---- 260
Query: 595 RLIDACLKKDPTDRPTMYEIEHSLSNI 621
+I+ C DP RP I LS +
Sbjct: 261 NVIELCWSGDPKKRPHFSYIVKELSEL 287
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 47/180 (26%), Positives = 88/180 (48%), Gaps = 15/180 (8%)
Query: 370 GGFAAIKKVNG-------DVSKEIALLNKINHSNLIILSGVCFNEG--NCYLVYEYAVNG 420
G A+KK+ D +EI +L + H N++ GVC++ G N L+ EY G
Sbjct: 45 GEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYG 104
Query: 421 TLSDWVFSNKNEGKYLDWKQRIQIALDVATGLNYLHSFTNPPHVHKDINSSNVLLDSDLR 480
+L D++ +K +D + +Q + G+ YL + ++H+D+ + N+L++++ R
Sbjct: 105 SLRDYLQKHKER---IDHIKLLQYTSQICKGMEYLGT---KRYIHRDLATRNILVENENR 158
Query: 481 AKIANFAMARPAEGQEGEFALTRHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLILEMLT 540
KI +F + + + + + APE L S DV++FGV++ E+ T
Sbjct: 159 VKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 218
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 47/180 (26%), Positives = 88/180 (48%), Gaps = 15/180 (8%)
Query: 370 GGFAAIKKVNG-------DVSKEIALLNKINHSNLIILSGVCFNEG--NCYLVYEYAVNG 420
G A+KK+ D +EI +L + H N++ GVC++ G N L+ EY G
Sbjct: 42 GEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYG 101
Query: 421 TLSDWVFSNKNEGKYLDWKQRIQIALDVATGLNYLHSFTNPPHVHKDINSSNVLLDSDLR 480
+L D++ +K +D + +Q + G+ YL + ++H+D+ + N+L++++ R
Sbjct: 102 SLRDYLQKHKER---IDHIKLLQYTSQICKGMEYLGT---KRYIHRDLATRNILVENENR 155
Query: 481 AKIANFAMARPAEGQEGEFALTRHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLILEMLT 540
KI +F + + + + + APE L S DV++FGV++ E+ T
Sbjct: 156 VKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 215
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 69/265 (26%), Positives = 117/265 (44%), Gaps = 43/265 (16%)
Query: 361 GSVYRGKIN--GGFAAIKKVN--------GDVSKEIALLNKINHSNLIILSGVCFNEGNC 410
G VY+G N AIK ++ D+ +EI +L++ + + G
Sbjct: 33 GEVYKGIDNHTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYITRYFGSYLKSTKL 92
Query: 411 YLVYEYAVNGTLSDWVFSNKNEGKYLDWKQRIQIALDVATGLNYLHSFTNPPHVHKDINS 470
+++ EY G+ D + E Y+ I ++ GL+YLHS +H+DI +
Sbjct: 93 WIIMEYLGGGSALDLLKPGPLEETYI-----ATILREILKGLDYLHSERK---IHRDIKA 144
Query: 471 SNVLLDSDLRAKIANFAMARPAEGQEGEFALTRH-IVGTKGYMAPEYLENGLVSTKLDVY 529
+NVLL K+A+F +A GQ + + R+ VGT +MAPE ++ K D++
Sbjct: 145 ANVLLSEQGDVKLADFGVA----GQLTDTQIKRNXFVGTPFWMAPEVIKQSAYDFKADIW 200
Query: 530 AFGVLILEMLTGKEAAALHAEENNMHLSDVLNAVLTKEDGEESLRHFIDPTLQGNYPLEL 589
+ G+ +E+ G+ +++H VL + PTL+G +
Sbjct: 201 SLGITAIELAKGE------PPNSDLHPMRVLFLIPKNS----------PPTLEGQHSKPF 244
Query: 590 ALLVIRLIDACLKKDPTDRPTMYEI 614
++ACL KDP RPT E+
Sbjct: 245 K----EFVEACLNKDPRFRPTAKEL 265
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 66/266 (24%), Positives = 126/266 (47%), Gaps = 36/266 (13%)
Query: 361 GSVYRGKINGGFAAIKKVN---------GDVSKEIALLNKINHSNLIILSGVCFNEGNCY 411
G+VY+GK +G A+K +N E+ +L K H N+++ G +
Sbjct: 26 GTVYKGKWHGD-VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS-TKPQLA 83
Query: 412 LVYEYAVNGTLSDWVFSNKNEGKYLDWKQRIQIALDVATGLNYLHSFTNPPHVHKDINSS 471
+V ++ +L + +++ + + K+ I IA A G++YLH+ + +H+D+ S+
Sbjct: 84 IVTQWCEGSSLYHHLHASETK---FEMKKLIDIARQTARGMDYLHAKSI---IHRDLKSN 137
Query: 472 NVLLDSDLRAKIANFAMARPAEGQEGEFALTRHIVGTKGYMAPEYL---ENGLVSTKLDV 528
N+ L D KI +F +A G + + G+ +MAPE + ++ S + DV
Sbjct: 138 NIFLHEDNTVKIGDFGLATVKSRWSGSHQFEQ-LSGSILWMAPEVIRMQDSNPYSFQSDV 196
Query: 529 YAFGVLILEMLTGKEAAALHAEENNMHLSDVLNAVLTKEDGEESLRHFIDPTLQGNYPLE 588
YAFG+++ E++TG+ + N++ D + ++ + L ++ N P
Sbjct: 197 YAFGIVLYELMTGQLPYS------NINNRDQIIEMVGRGSLSPDL-----SKVRSNCPKR 245
Query: 589 LALLVIRLIDACLKKDPTDRPTMYEI 614
+ RL+ CLKK +RP+ I
Sbjct: 246 MK----RLMAECLKKKRDERPSFPRI 267
>pdb|3Q4T|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3Q4T|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3SOC|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|3SOC|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|4ASX|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
pdb|4ASX|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
Length = 322
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 72/273 (26%), Positives = 124/273 (45%), Gaps = 32/273 (11%)
Query: 361 GSVYRGKINGGFAAIK------KVNGDVSKEIALLNKINHSNLIILSGVCFN----EGNC 410
G V++ ++ + A+K K + E+ L + H N++ G + +
Sbjct: 38 GCVWKAQLLNEYVAVKIFPIQDKQSWQNEYEVYSLPGMKHENILQFIGAEKRGTSVDVDL 97
Query: 411 YLVYEYAVNGTLSDWVFSNKNEGKYLDWKQRIQIALDVATGLNYLHSFT-------NPPH 463
+L+ + G+LSD++ +N + W + IA +A GL YLH P
Sbjct: 98 WLITAFHEKGSLSDFLKAN-----VVSWNELCHIAETMARGLAYLHEDIPGLKDGHKPAI 152
Query: 464 VHKDINSSNVLLDSDLRAKIANFAMARPAEGQEGEFALTRH-IVGTKGYMAPEYLENGL- 521
H+DI S NVLL ++L A IA+F +A E G+ A H VGT+ YMAPE LE +
Sbjct: 153 SHRDIKSKNVLLKNNLTACIADFGLALKFEA--GKSAGDTHGQVGTRRYMAPEVLEGAIN 210
Query: 522 ----VSTKLDVYAFGVLILEMLTGKEAAALHAEENNMHLSDVLNAVLTKEDGEESLRHFI 577
++D+YA G+++ E+ + AA +E + + + + ED +E + H
Sbjct: 211 FQRDAFLRIDMYAMGLVLWELASRCTAADGPVDEYMLPFEEEIGQHPSLEDMQEVVVHKK 270
Query: 578 D-PTLQGNYPLELAL-LVIRLIDACLKKDPTDR 608
P L+ + + ++ I+ C D R
Sbjct: 271 KRPVLRDYWQKHAGMAMLCETIEECWDHDAEAR 303
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 47/180 (26%), Positives = 88/180 (48%), Gaps = 15/180 (8%)
Query: 370 GGFAAIKKVNG-------DVSKEIALLNKINHSNLIILSGVCFNEG--NCYLVYEYAVNG 420
G A+KK+ D +EI +L + H N++ GVC++ G N L+ EY G
Sbjct: 57 GEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYG 116
Query: 421 TLSDWVFSNKNEGKYLDWKQRIQIALDVATGLNYLHSFTNPPHVHKDINSSNVLLDSDLR 480
+L D++ +K +D + +Q + G+ YL + ++H+D+ + N+L++++ R
Sbjct: 117 SLRDYLQKHKER---IDHIKLLQYTSQICKGMEYLGT---KRYIHRDLATRNILVENENR 170
Query: 481 AKIANFAMARPAEGQEGEFALTRHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLILEMLT 540
KI +F + + + + + APE L S DV++FGV++ E+ T
Sbjct: 171 VKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 230
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 47/180 (26%), Positives = 88/180 (48%), Gaps = 15/180 (8%)
Query: 370 GGFAAIKKVNG-------DVSKEIALLNKINHSNLIILSGVCFNEG--NCYLVYEYAVNG 420
G A+KK+ D +EI +L + H N++ GVC++ G N L+ EY G
Sbjct: 57 GEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYG 116
Query: 421 TLSDWVFSNKNEGKYLDWKQRIQIALDVATGLNYLHSFTNPPHVHKDINSSNVLLDSDLR 480
+L D++ +K +D + +Q + G+ YL + ++H+D+ + N+L++++ R
Sbjct: 117 SLRDYLQKHKER---IDHIKLLQYTSQICKGMEYLGT---KRYIHRDLATRNILVENENR 170
Query: 481 AKIANFAMARPAEGQEGEFALTRHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLILEMLT 540
KI +F + + + + + APE L S DV++FGV++ E+ T
Sbjct: 171 VKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 230
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 70/264 (26%), Positives = 121/264 (45%), Gaps = 43/264 (16%)
Query: 374 AIKKVNGDVSKEIALLNKI-NHSNLIILSGVCFNEGNCYLVYEYAVNGTLSDWVFSNK-- 430
A K + D + E+ +L K+ +H N+I L G C + G YL EYA +G L D++ ++
Sbjct: 61 ASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVL 120
Query: 431 ----------NEGKYLDWKQRIQIALDVATGLNYLHSFTNPPHVHKDINSSNVLLDSDLR 480
+ L +Q + A DVA G++YL + +H+++ + N+L+ +
Sbjct: 121 ETDPAFAIANSTASTLSSQQLLHFAADVARGMDYL---SQKQFIHRNLAARNILVGENYV 177
Query: 481 AKIANFAMARPAEGQEGEFALTRHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLILEM-- 538
AKIA+F ++R GQE T + + +MA E L + +T DV+++GVL+ E+
Sbjct: 178 AKIADFGLSR---GQEVYVKKTMGRLPVR-WMAIESLNYSVYTTNSDVWSYGVLLWEIVS 233
Query: 539 LTGKEAAALHAEENNMHLSDVLNAVLTKEDGEESLRHFIDPTLQGNYPLELALLVIRLID 598
L G + E L + + PL V L+
Sbjct: 234 LGGTPYCGMTCAE---------------------LYEKLPQGYRLEKPLNCDDEVYDLMR 272
Query: 599 ACLKKDPTDRPTMYEIEHSLSNIL 622
C ++ P +RP+ +I SL+ +L
Sbjct: 273 QCWREKPYERPSFAQILVSLNRML 296
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/248 (24%), Positives = 117/248 (47%), Gaps = 25/248 (10%)
Query: 376 KKVNGDVSKEIALLNKINHSNLIILSGVCFNEGNCYLVYEYAVNGTLSDWVFSNKNEGKY 435
+K D E +++ + +H N+I L GV +V EY NG+L F K++ ++
Sbjct: 87 EKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDS--FLRKHDAQF 144
Query: 436 LDWKQRIQIALDVATGLNYLHSFTNPPHVHKDINSSNVLLDSDLRAKIANFAMARPAEGQ 495
Q + + +A+G+ YL +VH+D+ + N+L++S+L K+++F +AR E
Sbjct: 145 TV-IQLVGMLRGIASGMKYLSDMG---YVHRDLAARNILINSNLVCKVSDFGLARVLEDD 200
Query: 496 EGEFALTRHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLILEMLTGKEAAALHAEENNMH 555
TR + +PE + ++ DV+++G+++ E+++ E M
Sbjct: 201 PEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWE-----MS 255
Query: 556 LSDVLNAVLTKEDGEESLRHFIDPTLQGNYPLELALLVIRLIDACLKKDPTDRPTMYEIE 615
DV+ AV +E R + P P++ + +L+ C +KD +RP +I
Sbjct: 256 NQDVIKAV------DEGYR--LPP------PMDCPAALYQLMLDCWQKDRNNRPKFEQIV 301
Query: 616 HSLSNILN 623
L ++
Sbjct: 302 SILDKLIR 309
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 67/246 (27%), Positives = 107/246 (43%), Gaps = 34/246 (13%)
Query: 384 KEIALLNKINHSNLIILSGVCFNEGNCYLVYEYAVNGTLSDWVFS-NKNEGKYLDWKQRI 442
KE A++ +I H NL+ L GVC E Y+V EY G L D++ N+ E + +
Sbjct: 77 KEAAVMKEIKHPNLVQLLGVCTLEPPFYIVTEYMPYGNLLDYLRECNREEVTAV---VLL 133
Query: 443 QIALDVATGLNYLHSFTNPPHVHKDINSSNVLLDSDLRAKIANFAMARPAEGQEGEFALT 502
+A +++ + YL +H+D+ + N L+ + K+A+F ++R G T
Sbjct: 134 YMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHVVKVADFGLSRLMTGD----TYT 186
Query: 503 RHIVGTK---GYMAPEYLENGLVSTKLDVYAFGVLILEMLTGKEAAALHAEENNMHLSDV 559
H G K + APE L S K DV+AFGVL+ E+ T + + LS V
Sbjct: 187 AH-AGAKFPIKWTAPESLAYNTFSIKSDVWAFGVLLWEIATYGMSPY-----PGIDLSQV 240
Query: 560 LNAVLTKEDGEESLRHFIDPTLQGNYPLELALLVIRLIDACLKKDPTDRPTMYEIEHSLS 619
+ ++ + P V L+ AC K P DRP+ E +
Sbjct: 241 YD--------------LLEKGYRMEQPEGCPPKVYELMRACWKWSPADRPSFAETHQAFE 286
Query: 620 NILNAS 625
+ + S
Sbjct: 287 TMFHDS 292
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 69/273 (25%), Positives = 128/273 (46%), Gaps = 42/273 (15%)
Query: 361 GSVYRGKINGGFAAIKKVN---------GDVSKEIALLNKINHSNLIILSGVCFNEGNCY 411
G+VY+GK +G A+K +N E+ +L K H N+++ G +
Sbjct: 22 GTVYKGKWHGD-VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS-TKPQLA 79
Query: 412 LVYEYAVNGTLSDWVFSNKNEGKYLDWKQRIQIALDVATGLNYLHSFTNPPHVHKDINSS 471
+V ++ +L + + + + + + I IA A G++YLH+ + +H+D+ S+
Sbjct: 80 IVTQWCEGSSLYHHLHIIETKFEMI---KLIDIARQTAQGMDYLHAKSI---IHRDLKSN 133
Query: 472 NVLLDSDLRAKIANFAMARPAEGQEGEFALTRHIVGTKGYMAPEYL---ENGLVSTKLDV 528
N+ L DL KI +F +A G + + G+ +MAPE + + S + DV
Sbjct: 134 NIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQ-LSGSILWMAPEVIRMQDKNPYSFQSDV 192
Query: 529 YAFGVLILEMLTGKEAAALHAEENNMHLSDVLNAVLTKEDGEESLRHFIDPTL---QGNY 585
YAFG+++ E++TG+ +N++ D + ++ R ++ P L + N
Sbjct: 193 YAFGIVLYELMTGQ------LPYSNINNRDQIIFMVG--------RGYLSPDLSKVRSNC 238
Query: 586 PLELALLVIRLIDACLKKDPTDRPTMYEIEHSL 618
P + RL+ CLKK +RP +I S+
Sbjct: 239 PKAMK----RLMAECLKKKRDERPLFPQILASI 267
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 62/252 (24%), Positives = 112/252 (44%), Gaps = 39/252 (15%)
Query: 381 DVSKEIALLNKINHSNLIILSGVCFNEGNCYLVYEYAVNGTLSDWVFSNKNEGKYLDWKQ 440
D +E ++ K++H L+ L GVC + LV E+ +G LSD++ + + +
Sbjct: 49 DFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVTEFMEHGCLSDYLRTQRG---LFAAET 105
Query: 441 RIQIALDVATGLNYLHSFTNPPHVHKDINSSNVLLDSDLRAKIANFAMARPAEGQEGEFA 500
+ + LDV G+ YL +H+D+ + N L+ + K+++F M R F
Sbjct: 106 LLGMCLDVCEGMAYLEEACV---IHRDLAARNCLVGENQVIKVSDFGMTR--------FV 154
Query: 501 LTRHIVGTKG------YMAPEYLENGLVSTKLDVYAFGVLILEMLTGKEAAALHAEENNM 554
L + G + +PE S+K DV++FGVL+ E+ + E + +N
Sbjct: 155 LDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFS--EGKIPYENRSN- 211
Query: 555 HLSDVLNAVLTKEDGEESLRHFIDPTLQGNYPLELALLVIRLIDACLKKDPTDRPTMYEI 614
S+V+ ED R + P L + V ++++ C ++ P DRP +
Sbjct: 212 --SEVV------EDISTGFRLY-KPRLASTH-------VYQIMNHCWRERPEDRPAFSRL 255
Query: 615 EHSLSNILNASL 626
L+ I + L
Sbjct: 256 LRQLAEIAESGL 267
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 68/266 (25%), Positives = 127/266 (47%), Gaps = 36/266 (13%)
Query: 361 GSVYRGKINGGFAAIKKVN---------GDVSKEIALLNKINHSNLIILSGVCFNEGNCY 411
G+VY+GK +G A+K +N E+ +L K H N+++ G
Sbjct: 38 GTVYKGKWHGD-VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS-TAPQLA 95
Query: 412 LVYEYAVNGTLSDWVFSNKNEGKYLDWKQRIQIALDVATGLNYLHSFTNPPHVHKDINSS 471
+V ++ +L + +++ + + K+ I IA A G++YLH+ + +H+D+ S+
Sbjct: 96 IVTQWCEGSSLYHHLHASETK---FEMKKLIDIARQTARGMDYLHAKSI---IHRDLKSN 149
Query: 472 NVLLDSDLRAKIANFAMARPAEGQEGEFALTRHIVGTKGYMAPEYL---ENGLVSTKLDV 528
N+ L D KI +F +A G + + G+ +MAPE + ++ S + DV
Sbjct: 150 NIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQ-LSGSILWMAPEVIRMQDSNPYSFQSDV 208
Query: 529 YAFGVLILEMLTGKEAAALHAEENNMHLSDVLNAVLTKEDGEESLRHFIDPTLQGNYPLE 588
YAFG+++ E++TG+ + N++ D + ++ G SL + ++ N P
Sbjct: 209 YAFGIVLYELMTGQLPYS------NINNRDQIIEMV----GRGSLSPDLS-KVRSNCPKR 257
Query: 589 LALLVIRLIDACLKKDPTDRPTMYEI 614
+ RL+ CLKK +RP+ I
Sbjct: 258 MK----RLMAECLKKKRDERPSFPRI 279
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 46/180 (25%), Positives = 89/180 (49%), Gaps = 15/180 (8%)
Query: 370 GGFAAIKKVNG-------DVSKEIALLNKINHSNLIILSGVCFNEG--NCYLVYEYAVNG 420
G A+KK+ D +EI +L + H N++ GVC++ G N L+ EY G
Sbjct: 40 GEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYG 99
Query: 421 TLSDWVFSNKNEGKYLDWKQRIQIALDVATGLNYLHSFTNPPHVHKDINSSNVLLDSDLR 480
+L D++ +K +D + +Q + G+ YL + ++H+++ + N+L++++ R
Sbjct: 100 SLRDYLQKHKER---IDHIKLLQYTSQICKGMEYLGT---KRYIHRNLATRNILVENENR 153
Query: 481 AKIANFAMARPAEGQEGEFALTRHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLILEMLT 540
KI +F + + + + + + APE L S DV++FGV++ E+ T
Sbjct: 154 VKIGDFGLTKVLPQDKEYYKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 213
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/241 (25%), Positives = 111/241 (46%), Gaps = 27/241 (11%)
Query: 385 EIALLNKINHSNLIILSGVCFNEGNCYLVYEYAVNGTLSDWVFSNKNEGKYLDWKQRIQI 444
E ++ + H L+ L V E Y++ E+ G+L D F +EG + I
Sbjct: 233 EANVMKTLQHDKLVKLHAVVTKE-PIYIITEFMAKGSLLD--FLKSDEGSKQPLPKLIDF 289
Query: 445 ALDVATGLNYLHSFTNPPHVHKDINSSNVLLDSDLRAKIANFAMARPAEGQEGEFALTRH 504
+ +A G+ ++ ++H+D+ ++N+L+ + L KIA+F +AR E + E+
Sbjct: 290 SAQIAEGMAFIEQRN---YIHRDLRAANILVSASLVCKIADFGLARVIE--DNEYTAREG 344
Query: 505 IVGTKGYMAPEYLENGLVSTKLDVYAFGVLILEMLTGKEAAALHAEENNMHLSDVLNAVL 564
+ APE + G + K DV++FG+L++E++T M +V+ A+
Sbjct: 345 AKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPY-----PGMSNPEVIRAL- 398
Query: 565 TKEDGEESLRHFIDPTLQGNYPLELALLVIRLIDACLKKDPTDRPTMYEIEHSLSNILNA 624
R + P + N P EL +++R C K P +RPT I+ L + A
Sbjct: 399 --------ERGYRMPRPE-NCPEELYNIMMR----CWKNRPEERPTFEYIQSVLDDFYTA 445
Query: 625 S 625
+
Sbjct: 446 T 446
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 72/277 (25%), Positives = 118/277 (42%), Gaps = 42/277 (15%)
Query: 361 GSVYRG--KINGGFAAIKKVNGDVS------KEIALLNKINHSNLIILSGVCFNEGNCYL 412
G VY G K A+K + D KE A++ +I H NL+ L GVC E Y+
Sbjct: 234 GEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYI 293
Query: 413 VYEYAVNGTLSDWVFS-NKNEGKYLDWKQRIQIALDVATGLNYLHSFTNPPHVHKDINSS 471
+ E+ G L D++ N+ E + + +A +++ + YL +H+++ +
Sbjct: 294 ITEFMTYGNLLDYLRECNRQEVSAV---VLLYMATQISSAMEYLEKKN---FIHRNLAAR 347
Query: 472 NVLLDSDLRAKIANFAMARPAEGQEGEFALTRHIVGTK---GYMAPEYLENGLVSTKLDV 528
N L+ + K+A+F ++R G T H G K + APE L S K DV
Sbjct: 348 NCLVGENHLVKVADFGLSRLMTGD----TYTAH-AGAKFPIKWTAPESLAYNKFSIKSDV 402
Query: 529 YAFGVLILEMLTGKEAAALHAEENNMHLSDVLNAVLTKEDGEESLRHFIDPTLQGNYPLE 588
+AFGVL+ E+ T + + LS V ++ + P
Sbjct: 403 WAFGVLLWEIATYGMSPY-----PGIDLSQVYE--------------LLEKDYRMERPEG 443
Query: 589 LALLVIRLIDACLKKDPTDRPTMYEIEHSLSNILNAS 625
V L+ AC + +P+DRP+ EI + + S
Sbjct: 444 CPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQES 480
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 72/277 (25%), Positives = 119/277 (42%), Gaps = 42/277 (15%)
Query: 361 GSVYRG--KINGGFAAIKKVNGDVS------KEIALLNKINHSNLIILSGVCFNEGNCYL 412
G VY G K A+K + D KE A++ +I H NL+ L GVC E Y+
Sbjct: 273 GEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYI 332
Query: 413 VYEYAVNGTLSDWVFS-NKNEGKYLDWKQRIQIALDVATGLNYLHSFTNPPHVHKDINSS 471
+ E+ G L D++ N+ E ++ + +A +++ + YL +H+++ +
Sbjct: 333 ITEFMTYGNLLDYLRECNRQE---VNAVVLLYMATQISSAMEYLEKKN---FIHRNLAAR 386
Query: 472 NVLLDSDLRAKIANFAMARPAEGQEGEFALTRHIVGTK---GYMAPEYLENGLVSTKLDV 528
N L+ + K+A+F ++R G T H G K + APE L S K DV
Sbjct: 387 NCLVGENHLVKVADFGLSRLMTGD----TYTAH-AGAKFPIKWTAPESLAYNKFSIKSDV 441
Query: 529 YAFGVLILEMLTGKEAAALHAEENNMHLSDVLNAVLTKEDGEESLRHFIDPTLQGNYPLE 588
+AFGVL+ E+ T + + LS V ++ + P
Sbjct: 442 WAFGVLLWEIATYGMSPY-----PGIDLSQVYE--------------LLEKDYRMERPEG 482
Query: 589 LALLVIRLIDACLKKDPTDRPTMYEIEHSLSNILNAS 625
V L+ AC + +P+DRP+ EI + + S
Sbjct: 483 CPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQES 519
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 69/273 (25%), Positives = 128/273 (46%), Gaps = 42/273 (15%)
Query: 361 GSVYRGKINGGFAAIKKVN---------GDVSKEIALLNKINHSNLIILSGVCFNEGNCY 411
G+VY+GK +G A+K +N E+ +L K H N+++ G +
Sbjct: 27 GTVYKGKWHGD-VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS-TKPQLA 84
Query: 412 LVYEYAVNGTLSDWVFSNKNEGKYLDWKQRIQIALDVATGLNYLHSFTNPPHVHKDINSS 471
+V ++ +L + + + + + + I IA A G++YLH+ + +H+D+ S+
Sbjct: 85 IVTQWCEGSSLYHHLHIIETKFEMI---KLIDIARQTAQGMDYLHAKSI---IHRDLKSN 138
Query: 472 NVLLDSDLRAKIANFAMARPAEGQEGEFALTRHIVGTKGYMAPEYL---ENGLVSTKLDV 528
N+ L DL KI +F +A G + + G+ +MAPE + + S + DV
Sbjct: 139 NIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQ-LSGSILWMAPEVIRMQDKNPYSFQSDV 197
Query: 529 YAFGVLILEMLTGKEAAALHAEENNMHLSDVLNAVLTKEDGEESLRHFIDPTL---QGNY 585
YAFG+++ E++TG+ +N++ D + ++ R ++ P L + N
Sbjct: 198 YAFGIVLYELMTGQ------LPYSNINNRDQIIFMVG--------RGYLSPDLSKVRSNC 243
Query: 586 PLELALLVIRLIDACLKKDPTDRPTMYEIEHSL 618
P + RL+ CLKK +RP +I S+
Sbjct: 244 PKAMK----RLMAECLKKKRDERPLFPQILASI 272
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 71/277 (25%), Positives = 117/277 (42%), Gaps = 42/277 (15%)
Query: 361 GSVYRG--KINGGFAAIKKVNGDVS------KEIALLNKINHSNLIILSGVCFNEGNCYL 412
G VY G K A+K + D KE A++ +I H NL+ L GVC E Y+
Sbjct: 28 GEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYI 87
Query: 413 VYEYAVNGTLSDWVFS-NKNEGKYLDWKQRIQIALDVATGLNYLHSFTNPPHVHKDINSS 471
+ E+ G L D++ N+ E ++ + +A +++ + YL +H+D+ +
Sbjct: 88 ITEFMTYGNLLDYLRECNRQE---VNAVVLLYMATQISSAMEYLEKKN---FIHRDLAAR 141
Query: 472 NVLLDSDLRAKIANFAMARPAEGQEGEFALTRHIVGTK---GYMAPEYLENGLVSTKLDV 528
N L+ + K+A+F ++R G G K + APE L S K DV
Sbjct: 142 NCLVGENHLVKVADFGLSRLMTGD-----TYTAPAGAKFPIKWTAPESLAYNKFSIKSDV 196
Query: 529 YAFGVLILEMLTGKEAAALHAEENNMHLSDVLNAVLTKEDGEESLRHFIDPTLQGNYPLE 588
+AFGVL+ E+ T + + LS V ++ + P
Sbjct: 197 WAFGVLLWEIATYGMSPY-----PGIDLSQVYE--------------LLEKDYRMERPEG 237
Query: 589 LALLVIRLIDACLKKDPTDRPTMYEIEHSLSNILNAS 625
V L+ AC + +P+DRP+ EI + + S
Sbjct: 238 CPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQES 274
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/258 (23%), Positives = 121/258 (46%), Gaps = 29/258 (11%)
Query: 368 INGGFAAIKKVNGDVSKEIALLNKINHSNLIILSGVCFNEGNCYLVYEYAVNGTLSDWVF 427
+ G+ ++V D E ++ + +H N+I L GV ++ EY NG L ++
Sbjct: 81 LKAGYTEKQRV--DFLGEAGIMGQFSHHNIIRLEGVISKYKPMMIITEYMENGALDKFLR 138
Query: 428 SNKNEGKYLDWKQRIQIALDVATGLNYLHSFTNPPHVHKDINSSNVLLDSDLRAKIANFA 487
E L Q + + +A G+ YL N +VH+D+ + N+L++S+L K+++F
Sbjct: 139 EKDGEFSVL---QLVGMLRGIAAGMKYL---ANMNYVHRDLAARNILVNSNLVCKVSDFG 192
Query: 488 MARPAEGQ-EGEFALTRHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLILEMLTGKEAAA 546
++R E E + + + + + APE + ++ DV++FG+++ E++T E
Sbjct: 193 LSRVLEDDPEATYTTSGGKIPIR-WTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERP- 250
Query: 547 LHAEENNMHLSDVLNAVLTKEDGEESLRHFIDPTLQGNYPLELALLVIRLIDACLKKDPT 606
+ E +N + +N DG F PT P++ + +L+ C +++
Sbjct: 251 -YWELSNHEVMKAIN------DG------FRLPT-----PMDCPSAIYQLMMQCWQQERA 292
Query: 607 DRPTMYEIEHSLSNILNA 624
RP +I L ++ A
Sbjct: 293 RRPKFADIVSILDKLIRA 310
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 72/277 (25%), Positives = 119/277 (42%), Gaps = 42/277 (15%)
Query: 361 GSVYRG--KINGGFAAIKKVNGDVS------KEIALLNKINHSNLIILSGVCFNEGNCYL 412
G VY G K A+K + D KE A++ +I H NL+ L GVC E Y+
Sbjct: 231 GEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYI 290
Query: 413 VYEYAVNGTLSDWVFS-NKNEGKYLDWKQRIQIALDVATGLNYLHSFTNPPHVHKDINSS 471
+ E+ G L D++ N+ E ++ + +A +++ + YL +H+++ +
Sbjct: 291 ITEFMTYGNLLDYLRECNRQE---VNAVVLLYMATQISSAMEYLEKKN---FIHRNLAAR 344
Query: 472 NVLLDSDLRAKIANFAMARPAEGQEGEFALTRHIVGTK---GYMAPEYLENGLVSTKLDV 528
N L+ + K+A+F ++R G T H G K + APE L S K DV
Sbjct: 345 NCLVGENHLVKVADFGLSRLMTGD----TYTAH-AGAKFPIKWTAPESLAYNKFSIKSDV 399
Query: 529 YAFGVLILEMLTGKEAAALHAEENNMHLSDVLNAVLTKEDGEESLRHFIDPTLQGNYPLE 588
+AFGVL+ E+ T + + LS V ++ + P
Sbjct: 400 WAFGVLLWEIATYGMSPY-----PGIDLSQVYE--------------LLEKDYRMERPEG 440
Query: 589 LALLVIRLIDACLKKDPTDRPTMYEIEHSLSNILNAS 625
V L+ AC + +P+DRP+ EI + + S
Sbjct: 441 CPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQES 477
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 68/269 (25%), Positives = 126/269 (46%), Gaps = 42/269 (15%)
Query: 361 GSVYRGKINGGFAAIKKVN---------GDVSKEIALLNKINHSNLIILSGVCFNEGNCY 411
G+VY+GK +G A+K +N E+ +L K H N+++ G +
Sbjct: 24 GTVYKGKWHGD-VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS-TKPQLA 81
Query: 412 LVYEYAVNGTLSDWVFSNKNEGKYLDWKQRIQIALDVATGLNYLHSFTNPPHVHKDINSS 471
+V ++ +L + + + + + + I IA A G++YLH+ + +H+D+ S+
Sbjct: 82 IVTQWCEGSSLYHHLHIIETKFEMI---KLIDIARQTAQGMDYLHAKSI---IHRDLKSN 135
Query: 472 NVLLDSDLRAKIANFAMARPAEGQEGEFALTRHIVGTKGYMAPEYL---ENGLVSTKLDV 528
N+ L DL KI +F +A G + + G+ +MAPE + + S + DV
Sbjct: 136 NIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQ-LSGSILWMAPEVIRMQDKNPYSFQSDV 194
Query: 529 YAFGVLILEMLTGKEAAALHAEENNMHLSDVLNAVLTKEDGEESLRHFIDPTL---QGNY 585
YAFG+++ E++TG+ +N++ D + ++ R ++ P L + N
Sbjct: 195 YAFGIVLYELMTGQ------LPYSNINNRDQIIFMVG--------RGYLSPDLSKVRSNC 240
Query: 586 PLELALLVIRLIDACLKKDPTDRPTMYEI 614
P + RL+ CLKK +RP +I
Sbjct: 241 PKAMK----RLMAECLKKKRDERPLFPQI 265
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/248 (23%), Positives = 119/248 (47%), Gaps = 25/248 (10%)
Query: 376 KKVNGDVSKEIALLNKINHSNLIILSGVCFNEGNCYLVYEYAVNGTLSDWVFSNKNEGKY 435
+K D E +++ + +H N+I L GV +V EY NG+L F K++ ++
Sbjct: 58 EKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDS--FLRKHDAQF 115
Query: 436 LDWKQRIQIALDVATGLNYLHSFTNPPHVHKDINSSNVLLDSDLRAKIANFAMARPAEGQ 495
Q + + +A+G+ YL ++ +VH+D+ + N+L++S+L K+++F ++R E
Sbjct: 116 TV-IQLVGMLRGIASGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDD 171
Query: 496 EGEFALTRHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLILEMLTGKEAAALHAEENNMH 555
TR + +PE + ++ DV+++G+++ E+++ E M
Sbjct: 172 PEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWE-----MS 226
Query: 556 LSDVLNAVLTKEDGEESLRHFIDPTLQGNYPLELALLVIRLIDACLKKDPTDRPTMYEIE 615
DV+ AV +E R + P P++ + +L+ C +KD +RP +I
Sbjct: 227 NQDVIKAV------DEGYR--LPP------PMDCPAALYQLMLDCWQKDRNNRPKFEQIV 272
Query: 616 HSLSNILN 623
L ++
Sbjct: 273 SILDKLIR 280
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 69/273 (25%), Positives = 128/273 (46%), Gaps = 42/273 (15%)
Query: 361 GSVYRGKINGGFAAIKKVN---------GDVSKEIALLNKINHSNLIILSGVCFNEGNCY 411
G+VY+GK +G A+K +N E+ +L K H N+++ G +
Sbjct: 22 GTVYKGKWHGD-VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS-TKPQLA 79
Query: 412 LVYEYAVNGTLSDWVFSNKNEGKYLDWKQRIQIALDVATGLNYLHSFTNPPHVHKDINSS 471
+V ++ +L + + + + + + I IA A G++YLH+ + +H+D+ S+
Sbjct: 80 IVTQWCEGSSLYHHLHIIETKFEMI---KLIDIARQTAQGMDYLHAKSI---IHRDLKSN 133
Query: 472 NVLLDSDLRAKIANFAMARPAEGQEGEFALTRHIVGTKGYMAPEYL---ENGLVSTKLDV 528
N+ L DL KI +F +A G + + G+ +MAPE + + S + DV
Sbjct: 134 NIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQ-LSGSILWMAPEVIRMQDKNPYSFQSDV 192
Query: 529 YAFGVLILEMLTGKEAAALHAEENNMHLSDVLNAVLTKEDGEESLRHFIDPTL---QGNY 585
YAFG+++ E++TG+ +N++ D + ++ R ++ P L + N
Sbjct: 193 YAFGIVLYELMTGQ------LPYSNINNRDQIIFMVG--------RGYLSPDLSKVRSNC 238
Query: 586 PLELALLVIRLIDACLKKDPTDRPTMYEIEHSL 618
P + RL+ CLKK +RP +I S+
Sbjct: 239 PKAMK----RLMAECLKKKRDERPLFPQILASI 267
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 51/180 (28%), Positives = 90/180 (50%), Gaps = 17/180 (9%)
Query: 374 AIKKVNGDVSKEIALLNKI-NHSNLIILSGVCFNEGNCYLVYEYAVNGTLSDWVFSNKNE 432
A +K D+ E+ ++ I H N+I L G C +G Y++ EYA G L +++ + +
Sbjct: 79 ATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPP 138
Query: 433 G------------KYLDWKQRIQIALDVATGLNYLHSFTNPPHVHKDINSSNVLLDSDLR 480
G + + +K + +A G+ YL S +H+D+ + NVL+ +
Sbjct: 139 GMEXSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKC---IHRDLAARNVLVTENNV 195
Query: 481 AKIANFAMARPAEGQEGEFALTRHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLILEMLT 540
KIA+F +AR + T + K +MAPE L + + + + DV++FGVL+ E+ T
Sbjct: 196 MKIADFGLARDINNIDXXKKTTNGRLPVK-WMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 59/248 (23%), Positives = 117/248 (47%), Gaps = 25/248 (10%)
Query: 376 KKVNGDVSKEIALLNKINHSNLIILSGVCFNEGNCYLVYEYAVNGTLSDWVFSNKNEGKY 435
+K D E +++ + +H N+I L GV +V EY NG+L F K++ ++
Sbjct: 75 EKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDS--FLRKHDAQF 132
Query: 436 LDWKQRIQIALDVATGLNYLHSFTNPPHVHKDINSSNVLLDSDLRAKIANFAMARPAEGQ 495
Q + + +A+G+ YL +VH+D+ + N+L++S+L K+++F ++R E
Sbjct: 133 TV-IQLVGMLRGIASGMKYLSDMG---YVHRDLAARNILINSNLVCKVSDFGLSRVLEDD 188
Query: 496 EGEFALTRHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLILEMLTGKEAAALHAEENNMH 555
TR + +PE + ++ DV+++G+++ E+++ E M
Sbjct: 189 PEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWE-----MS 243
Query: 556 LSDVLNAVLTKEDGEESLRHFIDPTLQGNYPLELALLVIRLIDACLKKDPTDRPTMYEIE 615
DV+ AV +E R + P P++ + +L+ C +KD +RP +I
Sbjct: 244 NQDVIKAV------DEGYR--LPP------PMDCPAALYQLMLDCWQKDRNNRPKFEQIV 289
Query: 616 HSLSNILN 623
L ++
Sbjct: 290 SILDKLIR 297
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 71/277 (25%), Positives = 117/277 (42%), Gaps = 42/277 (15%)
Query: 361 GSVYRG--KINGGFAAIKKVNGDVS------KEIALLNKINHSNLIILSGVCFNEGNCYL 412
G VY G K A+K + D KE A++ +I H NL+ L GVC E Y+
Sbjct: 29 GEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYI 88
Query: 413 VYEYAVNGTLSDWVFS-NKNEGKYLDWKQRIQIALDVATGLNYLHSFTNPPHVHKDINSS 471
+ E+ G L D++ N+ E ++ + +A +++ + YL +H+D+ +
Sbjct: 89 ITEFMTYGNLLDYLRECNRQE---VNAVVLLYMATQISSAMEYLEKKN---FIHRDLAAR 142
Query: 472 NVLLDSDLRAKIANFAMARPAEGQEGEFALTRHIVGTK---GYMAPEYLENGLVSTKLDV 528
N L+ + K+A+F ++R G G K + APE L S K DV
Sbjct: 143 NCLVGENHLVKVADFGLSRLMTGD-----TYTAPAGAKFPIKWTAPESLAYNKFSIKSDV 197
Query: 529 YAFGVLILEMLTGKEAAALHAEENNMHLSDVLNAVLTKEDGEESLRHFIDPTLQGNYPLE 588
+AFGVL+ E+ T + + LS V ++ + P
Sbjct: 198 WAFGVLLWEIATYGMSPY-----PGIDLSQVYE--------------LLEKDYRMERPEG 238
Query: 589 LALLVIRLIDACLKKDPTDRPTMYEIEHSLSNILNAS 625
V L+ AC + +P+DRP+ EI + + S
Sbjct: 239 CPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQES 275
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 68/269 (25%), Positives = 126/269 (46%), Gaps = 42/269 (15%)
Query: 361 GSVYRGKINGGFAAIKKVN---------GDVSKEIALLNKINHSNLIILSGVCFNEGNCY 411
G+VY+GK +G A+K +N E+ +L K H N+++ G +
Sbjct: 27 GTVYKGKWHGD-VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS-TKPQLA 84
Query: 412 LVYEYAVNGTLSDWVFSNKNEGKYLDWKQRIQIALDVATGLNYLHSFTNPPHVHKDINSS 471
+V ++ +L + + + + + + I IA A G++YLH+ + +H+D+ S+
Sbjct: 85 IVTQWCEGSSLYHHLHIIETKFEMI---KLIDIARQTAQGMDYLHAKSI---IHRDLKSN 138
Query: 472 NVLLDSDLRAKIANFAMARPAEGQEGEFALTRHIVGTKGYMAPEYL---ENGLVSTKLDV 528
N+ L DL KI +F +A G + + G+ +MAPE + + S + DV
Sbjct: 139 NIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQ-LSGSILWMAPEVIRMQDKNPYSFQSDV 197
Query: 529 YAFGVLILEMLTGKEAAALHAEENNMHLSDVLNAVLTKEDGEESLRHFIDPTL---QGNY 585
YAFG+++ E++TG+ +N++ D + ++ R ++ P L + N
Sbjct: 198 YAFGIVLYELMTGQ------LPYSNINNRDQIIFMVG--------RGYLSPDLSKVRSNC 243
Query: 586 PLELALLVIRLIDACLKKDPTDRPTMYEI 614
P + RL+ CLKK +RP +I
Sbjct: 244 PKAMK----RLMAECLKKKRDERPLFPQI 268
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 46/180 (25%), Positives = 89/180 (49%), Gaps = 15/180 (8%)
Query: 370 GGFAAIKKVNG-------DVSKEIALLNKINHSNLIILSGVCFNEG--NCYLVYEYAVNG 420
G A+KK+ D +EI +L + H N++ GVC++ G N L+ EY G
Sbjct: 42 GEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYG 101
Query: 421 TLSDWVFSNKNEGKYLDWKQRIQIALDVATGLNYLHSFTNPPHVHKDINSSNVLLDSDLR 480
+L D++ ++ + +D + +Q + G+ YL + ++H+D+ + N+L++++ R
Sbjct: 102 SLRDYLQAH---AERIDHIKLLQYTSQICKGMEYLGT---KRYIHRDLATRNILVENENR 155
Query: 481 AKIANFAMARPAEGQEGEFALTRHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLILEMLT 540
KI +F + + + + + APE L S DV++FGV++ E+ T
Sbjct: 156 VKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 215
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 51/180 (28%), Positives = 90/180 (50%), Gaps = 17/180 (9%)
Query: 374 AIKKVNGDVSKEIALLNKI-NHSNLIILSGVCFNEGNCYLVYEYAVNGTLSDWVFSNKNE 432
A +K D+ E+ ++ I H N+I L G C +G Y++ EYA G L +++ + +
Sbjct: 79 ATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPP 138
Query: 433 G------------KYLDWKQRIQIALDVATGLNYLHSFTNPPHVHKDINSSNVLLDSDLR 480
G + + +K + +A G+ YL S +H+D+ + NVL+ +
Sbjct: 139 GMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKC---IHRDLAARNVLVTENNV 195
Query: 481 AKIANFAMARPAEGQEGEFALTRHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLILEMLT 540
KIA+F +AR + T + K +MAPE L + + + + DV++FGVL+ E+ T
Sbjct: 196 MKIADFGLARDINNIDXXKKTTNGRLPVK-WMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 62/262 (23%), Positives = 125/262 (47%), Gaps = 35/262 (13%)
Query: 372 FAAIK--------KVNGDVSKEIALLNKINHSNLIILSGVCFNEGNCYLVYEYAVNGTLS 423
F AIK K D E +++ + +H N+I L GV ++ E+ NG+L
Sbjct: 37 FVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNVIHLEGVVTKSTPVMIITEFMENGSLD 96
Query: 424 DWVFSNKNEGKYLDWKQRIQIALDVATGLNYLHSFTNPPHVHKDINSSNVLLDSDLRAKI 483
F +N+G++ Q + + +A G+ YL +VH+ + + N+L++S+L K+
Sbjct: 97 S--FLRQNDGQFTV-IQLVGMLRGIAAGMKYLADMN---YVHRALAARNILVNSNLVCKV 150
Query: 484 ANFAMARPAEGQEGEFALTRHIVGT--KGYMAPEYLENGLVSTKLDVYAFGVLILEMLTG 541
++F ++R E + T + G + APE ++ ++ DV+++G+++ E+++
Sbjct: 151 SDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSY 210
Query: 542 KEAAALHAEENNMHLSDVLNAVLTKEDGEESLRHFIDPTLQGNYPLELALLVIRLIDACL 601
E +M DV+NA+ E+ R + P P++ + +L+ C
Sbjct: 211 GERPYW-----DMTNQDVINAI------EQDYR--LPP------PMDCPSALHQLMLDCW 251
Query: 602 KKDPTDRPTMYEIEHSLSNILN 623
+KD RP +I ++L ++
Sbjct: 252 QKDRNHRPKFGQIVNTLDKMIR 273
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 68/269 (25%), Positives = 126/269 (46%), Gaps = 42/269 (15%)
Query: 361 GSVYRGKINGGFAAIKKVN---------GDVSKEIALLNKINHSNLIILSGVCFNEGNCY 411
G+VY+GK +G A+K +N E+ +L K H N+++ G +
Sbjct: 42 GTVYKGKWHGD-VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS-TKPQLA 99
Query: 412 LVYEYAVNGTLSDWVFSNKNEGKYLDWKQRIQIALDVATGLNYLHSFTNPPHVHKDINSS 471
+V ++ +L + + + + + + I IA A G++YLH+ + +H+D+ S+
Sbjct: 100 IVTQWCEGSSLYHHLHIIETKFEMI---KLIDIARQTAQGMDYLHAKSI---IHRDLKSN 153
Query: 472 NVLLDSDLRAKIANFAMARPAEGQEGEFALTRHIVGTKGYMAPEYL---ENGLVSTKLDV 528
N+ L DL KI +F +A G + + G+ +MAPE + + S + DV
Sbjct: 154 NIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQ-LSGSILWMAPEVIRMQDKNPYSFQSDV 212
Query: 529 YAFGVLILEMLTGKEAAALHAEENNMHLSDVLNAVLTKEDGEESLRHFIDPTL---QGNY 585
YAFG+++ E++TG+ + N++ D + ++ R ++ P L + N
Sbjct: 213 YAFGIVLYELMTGQLPYS------NINNRDQIIFMVG--------RGYLSPDLSKVRSNC 258
Query: 586 PLELALLVIRLIDACLKKDPTDRPTMYEI 614
P + RL+ CLKK +RP +I
Sbjct: 259 PKAMK----RLMAECLKKKRDERPLFPQI 283
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 62/243 (25%), Positives = 115/243 (47%), Gaps = 28/243 (11%)
Query: 384 KEIALLNKINHSNLIILSGVCFNEGNCYLVYEYAVNGTLSDWVFSNKNEGKYLDWKQRIQ 443
+E L+ + H L+ L V E Y++ E+ G+L D F +EG + + I
Sbjct: 56 EEANLMKTLQHDKLVRLYAVVTKEEPIYIITEFMAKGSLLD--FLKSDEGGKVLLPKLID 113
Query: 444 IALDVATGLNYLHSFTNPPHVHKDINSSNVLLDSDLRAKIANFAMARPAEGQEGEFALTR 503
+ +A G+ Y+ ++H+D+ ++NVL+ L KIA+F +AR E + E+
Sbjct: 114 FSAQIAEGMAYIERKN---YIHRDLRAANVLVSESLMCKIADFGLARVIE--DNEYTARE 168
Query: 504 HIVGTKGYMAPEYLENGLVSTKLDVYAFGVLILEMLT-GKEAAALHAEENNMHLSDVLNA 562
+ APE + G + K +V++FG+L+ E++T GK + N +DV++A
Sbjct: 169 GAKFPIKWTAPEAINFGCFTIKSNVWSFGILLYEIVTYGK---IPYPGRTN---ADVMSA 222
Query: 563 VLTKEDGEESLRHFIDPTLQGNYPLELALLVIRLIDACLKKDPTDRPTMYEIEHSLSNIL 622
+ + + P ++ N P EL ++ C K+ +RPT ++ L +
Sbjct: 223 L---------SQGYRMPRME-NCPDEL----YDIMKMCWKEKAEERPTFDYLQSVLDDFY 268
Query: 623 NAS 625
A+
Sbjct: 269 TAT 271
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 59/248 (23%), Positives = 117/248 (47%), Gaps = 25/248 (10%)
Query: 376 KKVNGDVSKEIALLNKINHSNLIILSGVCFNEGNCYLVYEYAVNGTLSDWVFSNKNEGKY 435
+K D E +++ + +H N+I L GV +V EY NG+L F K++ ++
Sbjct: 87 EKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDS--FLRKHDAQF 144
Query: 436 LDWKQRIQIALDVATGLNYLHSFTNPPHVHKDINSSNVLLDSDLRAKIANFAMARPAEGQ 495
Q + + +A+G+ YL +VH+D+ + N+L++S+L K+++F ++R E
Sbjct: 145 TV-IQLVGMLRGIASGMKYLSDMG---YVHRDLAARNILINSNLVCKVSDFGLSRVLEDD 200
Query: 496 EGEFALTRHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLILEMLTGKEAAALHAEENNMH 555
TR + +PE + ++ DV+++G+++ E+++ E M
Sbjct: 201 PEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWE-----MS 255
Query: 556 LSDVLNAVLTKEDGEESLRHFIDPTLQGNYPLELALLVIRLIDACLKKDPTDRPTMYEIE 615
DV+ AV +E R + P P++ + +L+ C +KD +RP +I
Sbjct: 256 NQDVIKAV------DEGYR--LPP------PMDCPAALYQLMLDCWQKDRNNRPKFEQIV 301
Query: 616 HSLSNILN 623
L ++
Sbjct: 302 SILDKLIR 309
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 68/269 (25%), Positives = 126/269 (46%), Gaps = 42/269 (15%)
Query: 361 GSVYRGKINGGFAAIKKVN---------GDVSKEIALLNKINHSNLIILSGVCFNEGNCY 411
G+VY+GK +G A+K +N E+ +L K H N+++ G +
Sbjct: 50 GTVYKGKWHGD-VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS-TKPQLA 107
Query: 412 LVYEYAVNGTLSDWVFSNKNEGKYLDWKQRIQIALDVATGLNYLHSFTNPPHVHKDINSS 471
+V ++ +L + + + + + + I IA A G++YLH+ + +H+D+ S+
Sbjct: 108 IVTQWCEGSSLYHHLHIIETKFEMI---KLIDIARQTAQGMDYLHAKSI---IHRDLKSN 161
Query: 472 NVLLDSDLRAKIANFAMARPAEGQEGEFALTRHIVGTKGYMAPEYL---ENGLVSTKLDV 528
N+ L DL KI +F +A G + + G+ +MAPE + + S + DV
Sbjct: 162 NIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQ-LSGSILWMAPEVIRMQDKNPYSFQSDV 220
Query: 529 YAFGVLILEMLTGKEAAALHAEENNMHLSDVLNAVLTKEDGEESLRHFIDPTL---QGNY 585
YAFG+++ E++TG+ + N++ D + ++ R ++ P L + N
Sbjct: 221 YAFGIVLYELMTGQLPYS------NINNRDQIIFMVG--------RGYLSPDLSKVRSNC 266
Query: 586 PLELALLVIRLIDACLKKDPTDRPTMYEI 614
P + RL+ CLKK +RP +I
Sbjct: 267 PKAMK----RLMAECLKKKRDERPLFPQI 291
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 59/248 (23%), Positives = 117/248 (47%), Gaps = 25/248 (10%)
Query: 376 KKVNGDVSKEIALLNKINHSNLIILSGVCFNEGNCYLVYEYAVNGTLSDWVFSNKNEGKY 435
+K D E +++ + +H N+I L GV +V EY NG+L F K++ ++
Sbjct: 87 EKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDS--FLRKHDAQF 144
Query: 436 LDWKQRIQIALDVATGLNYLHSFTNPPHVHKDINSSNVLLDSDLRAKIANFAMARPAEGQ 495
Q + + +A+G+ YL +VH+D+ + N+L++S+L K+++F ++R E
Sbjct: 145 TV-IQLVGMLRGIASGMKYLSDMG---YVHRDLAARNILINSNLVCKVSDFGLSRVLEDD 200
Query: 496 EGEFALTRHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLILEMLTGKEAAALHAEENNMH 555
TR + +PE + ++ DV+++G+++ E+++ E M
Sbjct: 201 PEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWE-----MS 255
Query: 556 LSDVLNAVLTKEDGEESLRHFIDPTLQGNYPLELALLVIRLIDACLKKDPTDRPTMYEIE 615
DV+ AV +E R + P P++ + +L+ C +KD +RP +I
Sbjct: 256 NQDVIKAV------DEGYR--LPP------PMDCPAALYQLMLDCWQKDRNNRPKFEQIV 301
Query: 616 HSLSNILN 623
L ++
Sbjct: 302 SILDKLIR 309
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 59/248 (23%), Positives = 117/248 (47%), Gaps = 25/248 (10%)
Query: 376 KKVNGDVSKEIALLNKINHSNLIILSGVCFNEGNCYLVYEYAVNGTLSDWVFSNKNEGKY 435
+K D E +++ + +H N+I L GV +V EY NG+L F K++ ++
Sbjct: 87 EKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDS--FLRKHDAQF 144
Query: 436 LDWKQRIQIALDVATGLNYLHSFTNPPHVHKDINSSNVLLDSDLRAKIANFAMARPAEGQ 495
Q + + +A+G+ YL +VH+D+ + N+L++S+L K+++F ++R E
Sbjct: 145 TV-IQLVGMLRGIASGMKYLSDMG---YVHRDLAARNILINSNLVCKVSDFGLSRVLEDD 200
Query: 496 EGEFALTRHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLILEMLTGKEAAALHAEENNMH 555
TR + +PE + ++ DV+++G+++ E+++ E M
Sbjct: 201 PEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWE-----MS 255
Query: 556 LSDVLNAVLTKEDGEESLRHFIDPTLQGNYPLELALLVIRLIDACLKKDPTDRPTMYEIE 615
DV+ AV +E R + P P++ + +L+ C +KD +RP +I
Sbjct: 256 NQDVIKAV------DEGYR--LPP------PMDCPAALYQLMLDCWQKDRNNRPKFEQIV 301
Query: 616 HSLSNILN 623
L ++
Sbjct: 302 SILDKLIR 309
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 61/264 (23%), Positives = 115/264 (43%), Gaps = 47/264 (17%)
Query: 381 DVSKEIALLNKINHSNLIILSGVCFNEGNCYLVYEYAVNGTLSDWVFSNKNEG------- 433
D+ E +L ++NH ++I L G C +G L+ EYA G+L ++ ++ G
Sbjct: 72 DLLSEFNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSG 131
Query: 434 -------------KYLDWKQRIQIALDVATGLNYLHSFTNPPHVHKDINSSNVLLDSDLR 480
+ L I A ++ G+ YL + VH+D+ + N+L+ +
Sbjct: 132 GSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEMS---LVHRDLAARNILVAEGRK 188
Query: 481 AKIANFAMARPAEGQEGEFALTRHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLILEMLT 540
KI++F ++R ++ ++ + K +MA E L + + +T+ DV++FGVL+ E++T
Sbjct: 189 MKISDFGLSRDVYEEDSXVKRSQGRIPVK-WMAIESLFDHIYTTQSDVWSFGVLLWEIVT 247
Query: 541 --GKEAAALHAEENNMHLSDVLNAVLTKEDGEESLRHFIDPTLQGNYPLELALLVIRLID 598
G + E + N + T E P + + RL+
Sbjct: 248 LGGNPYPGIPPER-------LFNLLKTGHRMER--------------PDNCSEEMYRLML 286
Query: 599 ACLKKDPTDRPTMYEIEHSLSNIL 622
C K++P RP +I L ++
Sbjct: 287 QCWKQEPDKRPVFADISKDLEKMM 310
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 59/248 (23%), Positives = 117/248 (47%), Gaps = 25/248 (10%)
Query: 376 KKVNGDVSKEIALLNKINHSNLIILSGVCFNEGNCYLVYEYAVNGTLSDWVFSNKNEGKY 435
+K D E +++ + +H N+I L GV +V EY NG+L F K++ ++
Sbjct: 87 EKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDS--FLRKHDAQF 144
Query: 436 LDWKQRIQIALDVATGLNYLHSFTNPPHVHKDINSSNVLLDSDLRAKIANFAMARPAEGQ 495
Q + + +A+G+ YL +VH+D+ + N+L++S+L K+++F ++R E
Sbjct: 145 TV-IQLVGMLRGIASGMKYLSDMG---YVHRDLAARNILINSNLVCKVSDFGLSRVLEDD 200
Query: 496 EGEFALTRHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLILEMLTGKEAAALHAEENNMH 555
TR + +PE + ++ DV+++G+++ E+++ E M
Sbjct: 201 PEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWE-----MS 255
Query: 556 LSDVLNAVLTKEDGEESLRHFIDPTLQGNYPLELALLVIRLIDACLKKDPTDRPTMYEIE 615
DV+ AV +E R + P P++ + +L+ C +KD +RP +I
Sbjct: 256 NQDVIKAV------DEGYR--LPP------PMDCPAALYQLMLDCWQKDRNNRPKFEQIV 301
Query: 616 HSLSNILN 623
L ++
Sbjct: 302 SILDKLIR 309
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 51/180 (28%), Positives = 90/180 (50%), Gaps = 17/180 (9%)
Query: 374 AIKKVNGDVSKEIALLNKI-NHSNLIILSGVCFNEGNCYLVYEYAVNGTLSDWVFSNKNE 432
A +K D+ E+ ++ I H N+I L G C +G Y++ EYA G L +++ + +
Sbjct: 79 ATEKDLSDLVSEMEMMKMIGKHKNIITLLGACTQDGPLYVIVEYASKGNLREYLRARRPP 138
Query: 433 G------------KYLDWKQRIQIALDVATGLNYLHSFTNPPHVHKDINSSNVLLDSDLR 480
G + + +K + +A G+ YL S +H+D+ + NVL+ +
Sbjct: 139 GMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKC---IHRDLAARNVLVTENNV 195
Query: 481 AKIANFAMARPAEGQEGEFALTRHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLILEMLT 540
KIA+F +AR + T + K +MAPE L + + + + DV++FGVL+ E+ T
Sbjct: 196 MKIADFGLARDINNIDYYKKTTNGRLPVK-WMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 65/250 (26%), Positives = 116/250 (46%), Gaps = 27/250 (10%)
Query: 376 KKVNGDVSKEIALLNKINHSNLIILSGVCFNEGNCYLVYEYAVNGTLSDWVFSNKNEGKY 435
++ D E +++ + +H N+I L GV +V EY NG+L F ++G++
Sbjct: 91 ERQRRDFLSEASIMGQFDHPNIIRLEGVVTRGRLAMIVTEYMENGSLD--TFLRTHDGQF 148
Query: 436 LDWKQRIQIALDVATGLNYLHSFTNPPHVHKDINSSNVLLDSDLRAKIANFAMARPAEGQ 495
Q + + V G+ YL +VH+D+ + NVL+DS+L K+++F ++R E
Sbjct: 149 TI-MQLVGMLRGVGAGMRYLSDLG---YVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDD 204
Query: 496 -EGEFALTRHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLILEMLTGKEAAALHAEENNM 554
+ + T + + + APE + S+ DV++FGV++ E+L E NM
Sbjct: 205 PDAAYTTTGGKIPIR-WTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERPYW-----NM 258
Query: 555 HLSDVLNAVLTKEDGEESLRHFIDPTLQGNYPLELALLVIRLIDACLKKDPTDRPTMYEI 614
DV+++V EE R P P+ + +L+ C KD RP +I
Sbjct: 259 TNRDVISSV------EEGYRL---PA-----PMGCPHALHQLMLDCWHKDRAQRPRFSQI 304
Query: 615 EHSLSNILNA 624
L ++ +
Sbjct: 305 VSVLDALIRS 314
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 59/248 (23%), Positives = 116/248 (46%), Gaps = 25/248 (10%)
Query: 376 KKVNGDVSKEIALLNKINHSNLIILSGVCFNEGNCYLVYEYAVNGTLSDWVFSNKNEGKY 435
+K D E +++ + +H N+I L GV +V EY NG+L F K++ ++
Sbjct: 87 EKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDS--FLRKHDAQF 144
Query: 436 LDWKQRIQIALDVATGLNYLHSFTNPPHVHKDINSSNVLLDSDLRAKIANFAMARPAEGQ 495
Q + + +A+G+ YL +VH+D+ + N+L++S+L K+++F + R E
Sbjct: 145 TV-IQLVGMLRGIASGMKYLSDMG---YVHRDLAARNILINSNLVCKVSDFGLGRVLEDD 200
Query: 496 EGEFALTRHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLILEMLTGKEAAALHAEENNMH 555
TR + +PE + ++ DV+++G+++ E+++ E M
Sbjct: 201 PEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWE-----MS 255
Query: 556 LSDVLNAVLTKEDGEESLRHFIDPTLQGNYPLELALLVIRLIDACLKKDPTDRPTMYEIE 615
DV+ AV +E R + P P++ + +L+ C +KD +RP +I
Sbjct: 256 NQDVIKAV------DEGYR--LPP------PMDCPAALYQLMLDCWQKDRNNRPKFEQIV 301
Query: 616 HSLSNILN 623
L ++
Sbjct: 302 SILDKLIR 309
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 61/236 (25%), Positives = 108/236 (45%), Gaps = 27/236 (11%)
Query: 385 EIALLNKINHSNLIILSGVCFNEGNCYLVYEYAVNGTLSDWVFSNKNEGKYLDWKQRIQI 444
E ++ + H L+ L V E Y++ E+ G+L D F +EG + I
Sbjct: 60 EANVMKTLQHDKLVKLHAVVTKEP-IYIITEFMAKGSLLD--FLKSDEGSKQPLPKLIDF 116
Query: 445 ALDVATGLNYLHSFTNPPHVHKDINSSNVLLDSDLRAKIANFAMARPAEGQEGEFALTRH 504
+ +A G+ ++ ++H+D+ ++N+L+ + L KIA+F +AR E + E+
Sbjct: 117 SAQIAEGMAFIEQRN---YIHRDLRAANILVSASLVCKIADFGLARVIE--DNEYTAREG 171
Query: 505 IVGTKGYMAPEYLENGLVSTKLDVYAFGVLILEMLTGKEAAALHAEENNMHLSDVLNAVL 564
+ APE + G + K DV++FG+L++E++T M +V+ A+
Sbjct: 172 AKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPY-----PGMSNPEVIRAL- 225
Query: 565 TKEDGEESLRHFIDPTLQGNYPLELALLVIRLIDACLKKDPTDRPTMYEIEHSLSN 620
E G R N P EL +++R C K P +RPT I+ L +
Sbjct: 226 --ERGYRMPR-------PENCPEELYNIMMR----CWKNRPEERPTFEYIQSVLDD 268
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 70/279 (25%), Positives = 127/279 (45%), Gaps = 41/279 (14%)
Query: 361 GSVYRGKINGGFAA--IKKVNGDVSK------EIALLNKINHSNLIILSGVCFNEGNCYL 412
G+VY+GK +G A +K V+ + E+A+L K H N+++ G + N +
Sbjct: 50 GTVYKGKWHGDVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGY-MTKDNLAI 108
Query: 413 VYEYAVNGTLSDWVFSNKNEGKYLDWKQRIQIALDVATGLNYLHSFTNPPHVHKDINSSN 472
V ++ +L + + + + Q I IA A G++YLH+ +H+D+ S+N
Sbjct: 109 VTQWCEGSSLYKHLHVQETKFQMF---QLIDIARQTAQGMDYLHAKNI---IHRDMKSNN 162
Query: 473 VLLDSDLRAKIANFAMARPAEGQEGEFALTRHIVGTKGYMAPEYL---ENGLVSTKLDVY 529
+ L L KI +F +A G + + G+ +MAPE + +N S + DVY
Sbjct: 163 IFLHEGLTVKIGDFGLATVKSRWSGSQQVEQP-TGSVLWMAPEVIRMQDNNPFSFQSDVY 221
Query: 530 AFGVLILEMLTGKEAAALHAEENNMHLSDVLNAVLTKEDGEESLRHFIDPTLQGNYPLEL 589
++G+++ E++TG+ + H+++ + G + P L Y
Sbjct: 222 SYGIVLYELMTGELPYS--------HINNRDQIIFMVGRG------YASPDLSKLYK-NC 266
Query: 590 ALLVIRLIDACLKKDPTDRPTMYEI-------EHSLSNI 621
+ RL+ C+KK +RP +I +HSL I
Sbjct: 267 PKAMKRLVADCVKKVKEERPLFPQILSSIELLQHSLPKI 305
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 69/273 (25%), Positives = 127/273 (46%), Gaps = 42/273 (15%)
Query: 361 GSVYRGKINGGFAAIKKVN---------GDVSKEIALLNKINHSNLIILSGVCFNEGNCY 411
G+VY+GK +G A+K +N E+ +L K H N+++ G
Sbjct: 22 GTVYKGKWHGD-VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS-TAPQLA 79
Query: 412 LVYEYAVNGTLSDWVFSNKNEGKYLDWKQRIQIALDVATGLNYLHSFTNPPHVHKDINSS 471
+V ++ +L + + + + + + I IA A G++YLH+ + +H+D+ S+
Sbjct: 80 IVTQWCEGSSLYHHLHIIETKFEMI---KLIDIARQTAQGMDYLHAKSI---IHRDLKSN 133
Query: 472 NVLLDSDLRAKIANFAMARPAEGQEGEFALTRHIVGTKGYMAPEYL---ENGLVSTKLDV 528
N+ L DL KI +F +A G + + G+ +MAPE + + S + DV
Sbjct: 134 NIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQ-LSGSILWMAPEVIRMQDKNPYSFQSDV 192
Query: 529 YAFGVLILEMLTGKEAAALHAEENNMHLSDVLNAVLTKEDGEESLRHFIDPTL---QGNY 585
YAFG+++ E++TG+ +N++ D + ++ R ++ P L + N
Sbjct: 193 YAFGIVLYELMTGQ------LPYSNINNRDQIIFMVG--------RGYLSPDLSKVRSNC 238
Query: 586 PLELALLVIRLIDACLKKDPTDRPTMYEIEHSL 618
P + RL+ CLKK +RP +I S+
Sbjct: 239 PKAMK----RLMAECLKKKRDERPLFPQILASI 267
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 68/269 (25%), Positives = 126/269 (46%), Gaps = 42/269 (15%)
Query: 361 GSVYRGKINGGFAAIKKVN---------GDVSKEIALLNKINHSNLIILSGVCFNEGNCY 411
G+VY+GK +G A+K +N E+ +L K H N+++ G +
Sbjct: 50 GTVYKGKWHGD-VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS-TKPQLA 107
Query: 412 LVYEYAVNGTLSDWVFSNKNEGKYLDWKQRIQIALDVATGLNYLHSFTNPPHVHKDINSS 471
+V ++ +L + + + + + + I IA A G++YLH+ + +H+D+ S+
Sbjct: 108 IVTQWCEGSSLYHHLHIIETKFEMI---KLIDIARQTAQGMDYLHAKSI---IHRDLKSN 161
Query: 472 NVLLDSDLRAKIANFAMARPAEGQEGEFALTRHIVGTKGYMAPEYL---ENGLVSTKLDV 528
N+ L DL KI +F +A G + + G+ +MAPE + + S + DV
Sbjct: 162 NIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQ-LSGSILWMAPEVIRMQDKNPYSFQSDV 220
Query: 529 YAFGVLILEMLTGKEAAALHAEENNMHLSDVLNAVLTKEDGEESLRHFIDPTL---QGNY 585
YAFG+++ E++TG+ + N++ D + ++ R ++ P L + N
Sbjct: 221 YAFGIVLYELMTGQLPYS------NINNRDQIIFMVG--------RGYLSPDLSKVRSNC 266
Query: 586 PLELALLVIRLIDACLKKDPTDRPTMYEI 614
P + RL+ CLKK +RP +I
Sbjct: 267 PKAMK----RLMAECLKKKRDERPLFPQI 291
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 68/269 (25%), Positives = 126/269 (46%), Gaps = 42/269 (15%)
Query: 361 GSVYRGKINGGFAAIKKVN---------GDVSKEIALLNKINHSNLIILSGVCFNEGNCY 411
G+VY+GK +G A+K +N E+ +L K H N+++ G +
Sbjct: 49 GTVYKGKWHGD-VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS-TKPQLA 106
Query: 412 LVYEYAVNGTLSDWVFSNKNEGKYLDWKQRIQIALDVATGLNYLHSFTNPPHVHKDINSS 471
+V ++ +L + + + + + + I IA A G++YLH+ + +H+D+ S+
Sbjct: 107 IVTQWCEGSSLYHHLHIIETKFEMI---KLIDIARQTAQGMDYLHAKSI---IHRDLKSN 160
Query: 472 NVLLDSDLRAKIANFAMARPAEGQEGEFALTRHIVGTKGYMAPEYL---ENGLVSTKLDV 528
N+ L DL KI +F +A G + + G+ +MAPE + + S + DV
Sbjct: 161 NIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQ-LSGSILWMAPEVIRMQDKNPYSFQSDV 219
Query: 529 YAFGVLILEMLTGKEAAALHAEENNMHLSDVLNAVLTKEDGEESLRHFIDPTL---QGNY 585
YAFG+++ E++TG+ + N++ D + ++ R ++ P L + N
Sbjct: 220 YAFGIVLYELMTGQLPYS------NINNRDQIIFMVG--------RGYLSPDLSKVRSNC 265
Query: 586 PLELALLVIRLIDACLKKDPTDRPTMYEI 614
P + RL+ CLKK +RP +I
Sbjct: 266 PKAMK----RLMAECLKKKRDERPLFPQI 290
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 59/248 (23%), Positives = 117/248 (47%), Gaps = 25/248 (10%)
Query: 376 KKVNGDVSKEIALLNKINHSNLIILSGVCFNEGNCYLVYEYAVNGTLSDWVFSNKNEGKY 435
+K D E +++ + +H N+I L GV +V EY NG+L F K++ ++
Sbjct: 85 EKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDS--FLRKHDAQF 142
Query: 436 LDWKQRIQIALDVATGLNYLHSFTNPPHVHKDINSSNVLLDSDLRAKIANFAMARPAEGQ 495
Q + + +A+G+ YL +VH+D+ + N+L++S+L K+++F ++R E
Sbjct: 143 TV-IQLVGMLRGIASGMKYLSDMG---YVHRDLAARNILINSNLVCKVSDFGLSRVLEDD 198
Query: 496 EGEFALTRHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLILEMLTGKEAAALHAEENNMH 555
TR + +PE + ++ DV+++G+++ E+++ E M
Sbjct: 199 PEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWE-----MS 253
Query: 556 LSDVLNAVLTKEDGEESLRHFIDPTLQGNYPLELALLVIRLIDACLKKDPTDRPTMYEIE 615
DV+ AV +E R + P P++ + +L+ C +KD +RP +I
Sbjct: 254 NQDVIKAV------DEGYR--LPP------PMDCPAALYQLMLDCWQKDRNNRPKFEQIV 299
Query: 616 HSLSNILN 623
L ++
Sbjct: 300 SILDKLIR 307
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 65/269 (24%), Positives = 115/269 (42%), Gaps = 40/269 (14%)
Query: 374 AIKKVNGDVSKEIALLNKI-NHSNLIILSGVCFNEGNCYLVYEYAVNGTLSDWVFSNKNE 432
A +K D+ E+ ++ I H N+I L G C +G Y++ EYA G L +++ + +
Sbjct: 66 ATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPP 125
Query: 433 G------------KYLDWKQRIQIALDVATGLNYLHSFTNPPHVHKDINSSNVLLDSDLR 480
G + + +K + +A G+ YL S +H+D+ + NVL+ +
Sbjct: 126 GMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKC---IHRDLTARNVLVTENNV 182
Query: 481 AKIANFAMARPAEGQEGEFALTRHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLILEMLT 540
KIA+F +AR + T + K +MAPE L + + + + DV++FGVL+ E+ T
Sbjct: 183 MKIADFGLARDINNIDYYKKTTNGRLPVK-WMAPEALFDRVYTHQSDVWSFGVLMWEIFT 241
Query: 541 --GKEAAALHAEENNMHLSDVLNAVLTKEDGEESLRHFIDPTLQGNYPLELALLVIRLID 598
G + EE L + + + P + ++
Sbjct: 242 LGGSPYPGIPVEE---------------------LFKLLKEGHRMDKPANCTNELYMMMR 280
Query: 599 ACLKKDPTDRPTMYEIEHSLSNILNASLN 627
C P+ RPT ++ L IL + N
Sbjct: 281 DCWHAVPSQRPTFKQLVEDLDRILTLTTN 309
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 63/244 (25%), Positives = 109/244 (44%), Gaps = 43/244 (17%)
Query: 385 EIALLNKINHSNLIILSGVCFNEGNCYLVYEYAVNGTLSDWVFSNKNEGKYLDWKQRIQI 444
E ++ + H L+ L V E Y++ E+ G+L D F +EG + I
Sbjct: 227 EANVMKTLQHDKLVKLHAVVTKE-PIYIITEFMAKGSLLD--FLKSDEGSKQPLPKLIDF 283
Query: 445 ALDVATGLNYLHSFTNPPHVHKDINSSNVLLDSDLRAKIANFAMARPAEGQEGEFALTRH 504
+ +A G+ ++ ++H+D+ ++N+L+ + L KIA+F +AR
Sbjct: 284 SAQIAEGMAFIEQRN---YIHRDLRAANILVSASLVCKIADFGLAR-------------- 326
Query: 505 IVGTK---GYMAPEYLENGLVSTKLDVYAFGVLILEMLTGKEAAALHAEENNMHLSDVLN 561
VG K + APE + G + K DV++FG+L++E++T M +V+
Sbjct: 327 -VGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPY-----PGMSNPEVIR 380
Query: 562 AVLTKEDGEESLRHFIDPTLQGNYPLELALLVIRLIDACLKKDPTDRPTMYEIEHSLSNI 621
A+ E G R N P EL +++R C K P +RPT I+ L +
Sbjct: 381 AL---ERGYRMPR-------PENCPEELYNIMMR----CWKNRPEERPTFEYIQSVLDDF 426
Query: 622 LNAS 625
A+
Sbjct: 427 YTAT 430
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 51/180 (28%), Positives = 90/180 (50%), Gaps = 17/180 (9%)
Query: 374 AIKKVNGDVSKEIALLNKI-NHSNLIILSGVCFNEGNCYLVYEYAVNGTLSDWVFSNKNE 432
A +K D+ E+ ++ I H N+I L G C +G Y++ EYA G L +++ + +
Sbjct: 125 ATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPP 184
Query: 433 G------------KYLDWKQRIQIALDVATGLNYLHSFTNPPHVHKDINSSNVLLDSDLR 480
G + + +K + +A G+ YL S +H+D+ + NVL+ +
Sbjct: 185 GMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKC---IHRDLAARNVLVTENNV 241
Query: 481 AKIANFAMARPAEGQEGEFALTRHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLILEMLT 540
KIA+F +AR + T + K +MAPE L + + + + DV++FGVL+ E+ T
Sbjct: 242 MKIADFGLARDINNIDYYKKTTNGRLPVK-WMAPEALFDRVYTHQSDVWSFGVLMWEIFT 300
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 65/249 (26%), Positives = 112/249 (44%), Gaps = 25/249 (10%)
Query: 376 KKVNGDVSKEIALLNKINHSNLIILSGVCFNEGNCYLVYEYAVNGTLSDWVFSNKNEGKY 435
++ D E +++ + +H N+I L GV +V EY NG+L F ++G++
Sbjct: 91 ERQRRDFLSEASIMGQFDHPNIIRLEGVVTRGRLAMIVTEYMENGSLD--TFLRTHDGQF 148
Query: 436 LDWKQRIQIALDVATGLNYLHSFTNPPHVHKDINSSNVLLDSDLRAKIANFAMARPAEGQ 495
Q + + V G+ YL +VH+D+ + NVL+DS+L K+++F ++R E
Sbjct: 149 TI-MQLVGMLRGVGAGMRYLSDLG---YVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDD 204
Query: 496 EGEFALTRHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLILEMLTGKEAAALHAEENNMH 555
T + APE + S+ DV++FGV++ E+L E NM
Sbjct: 205 PDAAXTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERPYW-----NMT 259
Query: 556 LSDVLNAVLTKEDGEESLRHFIDPTLQGNYPLELALLVIRLIDACLKKDPTDRPTMYEIE 615
DV+++V EE R P P+ + +L+ C KD RP +I
Sbjct: 260 NRDVISSV------EEGYRL---PA-----PMGCPHALHQLMLDCWHKDRAQRPRFSQIV 305
Query: 616 HSLSNILNA 624
L ++ +
Sbjct: 306 SVLDALIRS 314
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 61/264 (23%), Positives = 114/264 (43%), Gaps = 47/264 (17%)
Query: 381 DVSKEIALLNKINHSNLIILSGVCFNEGNCYLVYEYAVNGTLSDWVFSNKNEG------- 433
D+ E +L ++NH ++I L G C +G L+ EYA G+L ++ ++ G
Sbjct: 72 DLLSEFNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSG 131
Query: 434 -------------KYLDWKQRIQIALDVATGLNYLHSFTNPPHVHKDINSSNVLLDSDLR 480
+ L I A ++ G+ YL VH+D+ + N+L+ +
Sbjct: 132 GSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEMK---LVHRDLAARNILVAEGRK 188
Query: 481 AKIANFAMARPAEGQEGEFALTRHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLILEMLT 540
KI++F ++R ++ ++ + K +MA E L + + +T+ DV++FGVL+ E++T
Sbjct: 189 MKISDFGLSRDVYEEDSXVKRSQGRIPVK-WMAIESLFDHIYTTQSDVWSFGVLLWEIVT 247
Query: 541 --GKEAAALHAEENNMHLSDVLNAVLTKEDGEESLRHFIDPTLQGNYPLELALLVIRLID 598
G + E + N + T E P + + RL+
Sbjct: 248 LGGNPYPGIPPER-------LFNLLKTGHRMER--------------PDNCSEEMYRLML 286
Query: 599 ACLKKDPTDRPTMYEIEHSLSNIL 622
C K++P RP +I L ++
Sbjct: 287 QCWKQEPDKRPVFADISKDLEKMM 310
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 72.4 bits (176), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 49/185 (26%), Positives = 91/185 (49%), Gaps = 22/185 (11%)
Query: 367 KINGGFAAIKKVNGDVSK---------EIALLNKINHSNLIILSGVCFNEGNCYLVYEYA 417
K G A+KK+ D+ K E+ ++ +H N++ + ++V E+
Sbjct: 67 KHTGKQVAVKKM--DLRKQQRRELLFNEVVIMRDYHHDNVVDMYSSYLVGDELWVVMEFL 124
Query: 418 VNGTLSDWVFSNKNEGKYLDWKQRIQIALDVATGLNYLHSFTNPPHVHKDINSSNVLLDS 477
G L+D V + ++ +Q + L V L+YLH N +H+DI S ++LL S
Sbjct: 125 EGGALTDIVTHTR-----MNEEQIATVCLSVLRALSYLH---NQGVIHRDIKSDSILLTS 176
Query: 478 DLRAKIANFAMARPAEGQEGEFALTRHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLILE 537
D R K+++F E + +VGT +MAPE + T++D+++ G++++E
Sbjct: 177 DGRIKLSDFGFCAQVSK---EVPKRKXLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIE 233
Query: 538 MLTGK 542
M+ G+
Sbjct: 234 MIDGE 238
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 65/278 (23%), Positives = 128/278 (46%), Gaps = 40/278 (14%)
Query: 361 GSVYRGKING-----GFAAIKKVNGDVSK--------EIALLNKINHSNLIILSGVCFNE 407
G V RG++ AIK + G ++ E +++ + H N+I L GV N
Sbjct: 28 GEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSEASIMGQFEHPNIIRLEGVVTNS 87
Query: 408 GNCYLVYEYAVNGTLSDWVFSNKNEGKYLDWKQRIQIALDVATGLNYLHSFTNPPHVHKD 467
++ E+ NG L F N+G++ Q + + +A+G+ YL + +VH+D
Sbjct: 88 MPVMILTEFMENGALDS--FLRLNDGQFTV-IQLVGMLRGIASGMRYLAEMS---YVHRD 141
Query: 468 INSSNVLLDSDLRAKIANFAMARPAEGQEGEFALTRHIVGT--KGYMAPEYLENGLVSTK 525
+ + N+L++S+L K+++F ++R E + T + G + APE + ++
Sbjct: 142 LAARNILVNSNLVCKVSDFGLSRFLEENSSDPTYTSSLGGKIPIRWTAPEAIAFRKFTSA 201
Query: 526 LDVYAFGVLILEMLTGKEAAALHAEENNMHLSDVLNAVLTKEDGEESLRHFIDPTLQGNY 585
D +++G+++ E+++ E +M DV+NA+ E+ R P +
Sbjct: 202 SDAWSYGIVMWEVMSFGERPYW-----DMSNQDVINAI------EQDYRLPPPP----DC 246
Query: 586 PLELALLVIRLIDACLKKDPTDRPTMYEIEHSLSNILN 623
P L L++ C +KD RP ++ +L ++
Sbjct: 247 PTSLHQLML----DCWQKDRNARPRFPQVVSALDKMIR 280
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 51/180 (28%), Positives = 90/180 (50%), Gaps = 17/180 (9%)
Query: 374 AIKKVNGDVSKEIALLNKI-NHSNLIILSGVCFNEGNCYLVYEYAVNGTLSDWVFSNKNE 432
A +K D+ E+ ++ I H N+I L G C +G Y++ EYA G L +++ + +
Sbjct: 79 ATEKDLSDLVSEMEMMKMIGKHKNIIHLLGACTQDGPLYVIVEYASKGNLREYLRARRPP 138
Query: 433 G------------KYLDWKQRIQIALDVATGLNYLHSFTNPPHVHKDINSSNVLLDSDLR 480
G + + +K + +A G+ YL S +H+D+ + NVL+ +
Sbjct: 139 GMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKC---IHRDLAARNVLVTENNV 195
Query: 481 AKIANFAMARPAEGQEGEFALTRHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLILEMLT 540
KIA+F +AR + T + K +MAPE L + + + + DV++FGVL+ E+ T
Sbjct: 196 MKIADFGLARDINNIDYYKKTTNGRLPVK-WMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 59/248 (23%), Positives = 118/248 (47%), Gaps = 25/248 (10%)
Query: 376 KKVNGDVSKEIALLNKINHSNLIILSGVCFNEGNCYLVYEYAVNGTLSDWVFSNKNEGKY 435
+K D E +++ + +H N+I L GV +V EY NG+L F K++ ++
Sbjct: 87 EKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDS--FLRKHDAQF 144
Query: 436 LDWKQRIQIALDVATGLNYLHSFTNPPHVHKDINSSNVLLDSDLRAKIANFAMARPAEGQ 495
Q + + +A+G+ YL ++ VH+D+ + N+L++S+L K+++F ++R E
Sbjct: 145 TV-IQLVGMLRGIASGMKYL---SDMGFVHRDLAARNILINSNLVCKVSDFGLSRVLEDD 200
Query: 496 EGEFALTRHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLILEMLTGKEAAALHAEENNMH 555
TR + +PE + ++ DV+++G+++ E+++ E M
Sbjct: 201 PEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWE-----MS 255
Query: 556 LSDVLNAVLTKEDGEESLRHFIDPTLQGNYPLELALLVIRLIDACLKKDPTDRPTMYEIE 615
DV+ AV +E R + P P++ + +L+ C +KD +RP +I
Sbjct: 256 NQDVIKAV------DEGYR--LPP------PMDCPAALYQLMLDCWQKDRNNRPKFEQIV 301
Query: 616 HSLSNILN 623
L ++
Sbjct: 302 SILDKLIR 309
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 72.4 bits (176), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 65/269 (24%), Positives = 115/269 (42%), Gaps = 40/269 (14%)
Query: 374 AIKKVNGDVSKEIALLNKI-NHSNLIILSGVCFNEGNCYLVYEYAVNGTLSDWVFSNKNE 432
A +K D+ E+ ++ I H N+I L G C +G Y++ EYA G L +++ + +
Sbjct: 68 ATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPP 127
Query: 433 G------------KYLDWKQRIQIALDVATGLNYLHSFTNPPHVHKDINSSNVLLDSDLR 480
G + + +K + +A G+ YL S +H+D+ + NVL+ +
Sbjct: 128 GMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKC---IHRDLAARNVLVTENNV 184
Query: 481 AKIANFAMARPAEGQEGEFALTRHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLILEMLT 540
KIA+F +AR + T + K +MAPE L + + + + DV++FGVL+ E+ T
Sbjct: 185 MKIADFGLARDINNIDYYKKTTNGRLPVK-WMAPEALFDRVYTHQSDVWSFGVLMWEIFT 243
Query: 541 --GKEAAALHAEENNMHLSDVLNAVLTKEDGEESLRHFIDPTLQGNYPLELALLVIRLID 598
G + EE L + + + P + ++
Sbjct: 244 LGGSPYPGIPVEE---------------------LFKLLKEGHRMDKPANCTNELYMMMR 282
Query: 599 ACLKKDPTDRPTMYEIEHSLSNILNASLN 627
C P+ RPT ++ L IL + N
Sbjct: 283 DCWHAVPSQRPTFKQLVEDLDRILTLTTN 311
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 72.4 bits (176), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 61/264 (23%), Positives = 114/264 (43%), Gaps = 47/264 (17%)
Query: 381 DVSKEIALLNKINHSNLIILSGVCFNEGNCYLVYEYAVNGTLSDWVFSNKNEG------- 433
D+ E +L ++NH ++I L G C +G L+ EYA G+L ++ ++ G
Sbjct: 72 DLLSEFNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSG 131
Query: 434 -------------KYLDWKQRIQIALDVATGLNYLHSFTNPPHVHKDINSSNVLLDSDLR 480
+ L I A ++ G+ YL VH+D+ + N+L+ +
Sbjct: 132 GSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEMK---LVHRDLAARNILVAEGRK 188
Query: 481 AKIANFAMARPAEGQEGEFALTRHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLILEMLT 540
KI++F ++R ++ ++ + K +MA E L + + +T+ DV++FGVL+ E++T
Sbjct: 189 MKISDFGLSRDVYEEDSYVKRSQGRIPVK-WMAIESLFDHIYTTQSDVWSFGVLLWEIVT 247
Query: 541 --GKEAAALHAEENNMHLSDVLNAVLTKEDGEESLRHFIDPTLQGNYPLELALLVIRLID 598
G + E + N + T E P + + RL+
Sbjct: 248 LGGNPYPGIPPER-------LFNLLKTGHRMER--------------PDNCSEEMYRLML 286
Query: 599 ACLKKDPTDRPTMYEIEHSLSNIL 622
C K++P RP +I L ++
Sbjct: 287 QCWKQEPDKRPVFADISKDLEKMM 310
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 72.0 bits (175), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 65/269 (24%), Positives = 115/269 (42%), Gaps = 40/269 (14%)
Query: 374 AIKKVNGDVSKEIALLNKI-NHSNLIILSGVCFNEGNCYLVYEYAVNGTLSDWVFSNKNE 432
A +K D+ E+ ++ I H N+I L G C +G Y++ EYA G L +++ + +
Sbjct: 71 ATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPP 130
Query: 433 G------------KYLDWKQRIQIALDVATGLNYLHSFTNPPHVHKDINSSNVLLDSDLR 480
G + + +K + +A G+ YL S +H+D+ + NVL+ +
Sbjct: 131 GMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKC---IHRDLAARNVLVTENNV 187
Query: 481 AKIANFAMARPAEGQEGEFALTRHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLILEMLT 540
KIA+F +AR + T + K +MAPE L + + + + DV++FGVL+ E+ T
Sbjct: 188 MKIADFGLARDINNIDYYKKTTNGRLPVK-WMAPEALFDRVYTHQSDVWSFGVLMWEIFT 246
Query: 541 --GKEAAALHAEENNMHLSDVLNAVLTKEDGEESLRHFIDPTLQGNYPLELALLVIRLID 598
G + EE L + + + P + ++
Sbjct: 247 LGGSPYPGIPVEE---------------------LFKLLKEGHRMDKPANCTNELYMMMR 285
Query: 599 ACLKKDPTDRPTMYEIEHSLSNILNASLN 627
C P+ RPT ++ L IL + N
Sbjct: 286 DCWHAVPSQRPTFKQLVEDLDRILTLTTN 314
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 63/245 (25%), Positives = 105/245 (42%), Gaps = 27/245 (11%)
Query: 384 KEIALLNKINHSNLIILSGVCFN-EGNCYLVYEYAVNGTLSDWVFSNKNEGKYLDWKQRI 442
+E L+ +NH N++ L G+ EG +++ Y +G L ++ S + K I
Sbjct: 71 REGLLMRGLNHPNVLALIGIMLPPEGLPHVLLPYMCHGDLLQFIRSPQRNPTV---KDLI 127
Query: 443 QIALDVATGLNYLHSFTNPPHVHKDINSSNVLLDSDLRAKIANFAMARPAEGQE-GEFAL 501
L VA G+ YL VH+D+ + N +LD K+A+F +AR +E
Sbjct: 128 SFGLQVARGMEYL---AEQKFVHRDLAARNCMLDESFTVKVADFGLARDILDREYYSVQQ 184
Query: 502 TRHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLILEMLTGKEAAALHAEENNMHLSDVLN 561
RH + A E L+ +TK DV++FGVL+ E+LT H + +
Sbjct: 185 HRHARLPVKWTALESLQTYRFTTKSDVWSFGVLLWELLTRGAPPYRHIDPFD-------- 236
Query: 562 AVLTKEDGEESLRHFIDPTLQGNYPLELALLVIRLIDACLKKDPTDRPTMYEIEHSLSNI 621
L HF+ + P + +++ C + DP RPT + + I
Sbjct: 237 -----------LTHFLAQGRRLPQPEYCPDSLYQVMQQCWEADPAVRPTFRVLVGEVEQI 285
Query: 622 LNASL 626
++A L
Sbjct: 286 VSALL 290
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 45/180 (25%), Positives = 88/180 (48%), Gaps = 15/180 (8%)
Query: 370 GGFAAIKKVN-------GDVSKEIALLNKINHSNLIILSGVCFNEG--NCYLVYEYAVNG 420
G A+KK+ D +EI +L + H N++ GVC++ G N L+ E+ G
Sbjct: 42 GEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEFLPYG 101
Query: 421 TLSDWVFSNKNEGKYLDWKQRIQIALDVATGLNYLHSFTNPPHVHKDINSSNVLLDSDLR 480
+L +++ +K +D + +Q + G+ YL + ++H+D+ + N+L++++ R
Sbjct: 102 SLREYLQKHKER---IDHIKLLQYTSQICKGMEYLGT---KRYIHRDLATRNILVENENR 155
Query: 481 AKIANFAMARPAEGQEGEFALTRHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLILEMLT 540
KI +F + + + + + APE L S DV++FGV++ E+ T
Sbjct: 156 VKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 215
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 78/165 (47%), Gaps = 12/165 (7%)
Query: 378 VNGDVSKEIALLNKINHSNLIILSGVCFNEGNCYLVYEYAVNGTLSDWVFSNKNEGKYLD 437
V + +E+ + + + H N++ L G + YL+ EYA GT V+ + D
Sbjct: 53 VEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGT----VYRELQKLSKFD 108
Query: 438 WKQRIQIALDVATGLNYLHSFTNPPHVHKDINSSNVLLDSDLRAKIANFAMARPAEGQEG 497
++ ++A L+Y HS +H+DI N+LL S KIANF + A
Sbjct: 109 EQRTATYITELANALSYCHSKRV---IHRDIKPENLLLGSAGELKIANFGWSVHAPS--- 162
Query: 498 EFALTRHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLILEMLTGK 542
+ + GT Y+ PE +E + K+D+++ GVL E L GK
Sbjct: 163 --SRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 205
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 65/269 (24%), Positives = 115/269 (42%), Gaps = 40/269 (14%)
Query: 374 AIKKVNGDVSKEIALLNKI-NHSNLIILSGVCFNEGNCYLVYEYAVNGTLSDWVFSNKNE 432
A +K D+ E+ ++ I H N+I L G C +G Y++ EYA G L +++ + +
Sbjct: 79 ATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPP 138
Query: 433 G------------KYLDWKQRIQIALDVATGLNYLHSFTNPPHVHKDINSSNVLLDSDLR 480
G + + +K + +A G+ YL S +H+D+ + NVL+ +
Sbjct: 139 GMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKC---IHRDLAARNVLVTENNV 195
Query: 481 AKIANFAMARPAEGQEGEFALTRHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLILEMLT 540
KIA+F +AR + T + K +MAPE L + + + + DV++FGVL+ E+ T
Sbjct: 196 MKIADFGLARDINNIDYYKNTTNGRLPVK-WMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
Query: 541 --GKEAAALHAEENNMHLSDVLNAVLTKEDGEESLRHFIDPTLQGNYPLELALLVIRLID 598
G + EE L + + + P + ++
Sbjct: 255 LGGSPYPGIPVEE---------------------LFKLLKEGHRMDKPANCTNELYMMMR 293
Query: 599 ACLKKDPTDRPTMYEIEHSLSNILNASLN 627
C P+ RPT ++ L IL + N
Sbjct: 294 DCWHAVPSQRPTFKQLVEDLDRILTLTTN 322
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 78/165 (47%), Gaps = 12/165 (7%)
Query: 378 VNGDVSKEIALLNKINHSNLIILSGVCFNEGNCYLVYEYAVNGTLSDWVFSNKNEGKYLD 437
V + +E+ + + + H N++ L G + YL+ EYA GT V+ + D
Sbjct: 54 VEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGT----VYRELQKLSKFD 109
Query: 438 WKQRIQIALDVATGLNYLHSFTNPPHVHKDINSSNVLLDSDLRAKIANFAMARPAEGQEG 497
++ ++A L+Y HS +H+DI N+LL S KIANF + A
Sbjct: 110 EQRTATYITELANALSYCHSKRV---IHRDIKPENLLLGSAGELKIANFGWSVHAPS--- 163
Query: 498 EFALTRHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLILEMLTGK 542
+ + GT Y+ PE +E + K+D+++ GVL E L GK
Sbjct: 164 --SRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 206
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 87/173 (50%), Gaps = 17/173 (9%)
Query: 381 DVSKEIALLNKI-NHSNLIILSGVCFNEGNCYLVYEYAVNGTLSDWVFSNKNEG------ 433
D+ E+ ++ I H N+I L G C +G Y++ EYA G L +++ + + G
Sbjct: 86 DLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYD 145
Query: 434 ------KYLDWKQRIQIALDVATGLNYLHSFTNPPHVHKDINSSNVLLDSDLRAKIANFA 487
+ + +K + +A G+ YL S +H+D+ + NVL+ + KIA+F
Sbjct: 146 INRVPEEQMTFKDLVSCTYQLARGMEYLASQKC---IHRDLAARNVLVTENNVMKIADFG 202
Query: 488 MARPAEGQEGEFALTRHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLILEMLT 540
+AR + T + K +MAPE L + + + + DV++FGVL+ E+ T
Sbjct: 203 LARDINNIDYYKKTTNGRLPVK-WMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 50/180 (27%), Positives = 90/180 (50%), Gaps = 17/180 (9%)
Query: 374 AIKKVNGDVSKEIALLNKI-NHSNLIILSGVCFNEGNCYLVYEYAVNGTLSDWVFSNKNE 432
A +K D+ E+ ++ I H N+I L G C +G Y++ EYA G L +++ + +
Sbjct: 79 ATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPP 138
Query: 433 G------------KYLDWKQRIQIALDVATGLNYLHSFTNPPHVHKDINSSNVLLDSDLR 480
G + + +K + +A G+ YL S +H+D+ + NVL+ +
Sbjct: 139 GMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKC---IHRDLAARNVLVTENNV 195
Query: 481 AKIANFAMARPAEGQEGEFALTRHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLILEMLT 540
+IA+F +AR + T + K +MAPE L + + + + DV++FGVL+ E+ T
Sbjct: 196 MRIADFGLARDINNIDYYKKTTNGRLPVK-WMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 78/165 (47%), Gaps = 12/165 (7%)
Query: 378 VNGDVSKEIALLNKINHSNLIILSGVCFNEGNCYLVYEYAVNGTLSDWVFSNKNEGKYLD 437
V + +E+ + + + H N++ L G + YL+ EYA GT V+ + D
Sbjct: 77 VEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGT----VYRELQKLSKFD 132
Query: 438 WKQRIQIALDVATGLNYLHSFTNPPHVHKDINSSNVLLDSDLRAKIANFAMARPAEGQEG 497
++ ++A L+Y HS +H+DI N+LL S KIA+F + A
Sbjct: 133 EQRTATYITELANALSYCHSKRV---IHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR 189
Query: 498 EFALTRHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLILEMLTGK 542
+ + GT Y+ PE +E + K+D+++ GVL E L GK
Sbjct: 190 D-----DLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 229
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 78/165 (47%), Gaps = 12/165 (7%)
Query: 378 VNGDVSKEIALLNKINHSNLIILSGVCFNEGNCYLVYEYAVNGTLSDWVFSNKNEGKYLD 437
V + +E+ + + + H N++ L G + YL+ EYA GT V+ + D
Sbjct: 54 VEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGT----VYRELQKLSKFD 109
Query: 438 WKQRIQIALDVATGLNYLHSFTNPPHVHKDINSSNVLLDSDLRAKIANFAMARPAEGQEG 497
++ ++A L+Y HS +H+DI N+LL S KIA+F + A
Sbjct: 110 EQRTATYITELANALSYCHSKRV---IHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR 166
Query: 498 EFALTRHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLILEMLTGK 542
+ + GT Y+ PE +E + K+D+++ GVL E L GK
Sbjct: 167 D-----DLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 206
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 65/278 (23%), Positives = 128/278 (46%), Gaps = 40/278 (14%)
Query: 361 GSVYRGKING-----GFAAIKKVNGDVSK--------EIALLNKINHSNLIILSGVCFNE 407
G V RG++ AIK + G ++ E +++ + H N+I L GV N
Sbjct: 30 GEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSEASIMGQFEHPNIIRLEGVVTNS 89
Query: 408 GNCYLVYEYAVNGTLSDWVFSNKNEGKYLDWKQRIQIALDVATGLNYLHSFTNPPHVHKD 467
++ E+ NG L F N+G++ Q + + +A+G+ YL + +VH+D
Sbjct: 90 MPVMILTEFMENGALDS--FLRLNDGQFTV-IQLVGMLRGIASGMRYLAEMS---YVHRD 143
Query: 468 INSSNVLLDSDLRAKIANFAMARPAEGQEGEFALTRHIVGT--KGYMAPEYLENGLVSTK 525
+ + N+L++S+L K+++F ++R E + T + G + APE + ++
Sbjct: 144 LAARNILVNSNLVCKVSDFGLSRFLEENSSDPTETSSLGGKIPIRWTAPEAIAFRKFTSA 203
Query: 526 LDVYAFGVLILEMLTGKEAAALHAEENNMHLSDVLNAVLTKEDGEESLRHFIDPTLQGNY 585
D +++G+++ E+++ E +M DV+NA+ E+ R P +
Sbjct: 204 SDAWSYGIVMWEVMSFGERPYW-----DMSNQDVINAI------EQDYRLPPPP----DC 248
Query: 586 PLELALLVIRLIDACLKKDPTDRPTMYEIEHSLSNILN 623
P L L++ C +KD RP ++ +L ++
Sbjct: 249 PTSLHQLML----DCWQKDRNARPRFPQVVSALDKMIR 282
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/199 (26%), Positives = 92/199 (46%), Gaps = 20/199 (10%)
Query: 385 EIALLNKINHSNLIILSGVCFNEGNC--YLVYEYAVNGTLSDWVFSNKNEGKYLDWKQRI 442
E+ LL ++ H N++ + N Y+V EY G L+ + E +YLD + +
Sbjct: 55 EVNLLRELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVL 114
Query: 443 QIALDVATGLNYLHSFTNPPH--VHKDINSSNVLLDSDLRAKIANFAMARPAEGQEGEFA 500
++ + L H ++ H +H+D+ +NV LD K+ +F +AR E +FA
Sbjct: 115 RVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDE-DFA 173
Query: 501 LTRHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLILEM---------LTGKEAAALHAEE 551
+ VGT YM+PE + + K D+++ G L+ E+ + KE A E
Sbjct: 174 --KEFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQKELAGKIREG 231
Query: 552 NNMHL----SDVLNAVLTK 566
+ SD LN ++T+
Sbjct: 232 KFRRIPYRYSDELNEIITR 250
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 78/165 (47%), Gaps = 12/165 (7%)
Query: 378 VNGDVSKEIALLNKINHSNLIILSGVCFNEGNCYLVYEYAVNGTLSDWVFSNKNEGKYLD 437
V + +E+ + + + H N++ L G + YL+ EYA GT V+ + D
Sbjct: 51 VEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGT----VYRELQKLSKFD 106
Query: 438 WKQRIQIALDVATGLNYLHSFTNPPHVHKDINSSNVLLDSDLRAKIANFAMARPAEGQEG 497
++ ++A L+Y HS +H+DI N+LL S KIA+F + A
Sbjct: 107 EQRTATYITELANALSYCHSKRV---IHRDIKPENLLLGSAGELKIADFGWSVHAPS--- 160
Query: 498 EFALTRHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLILEMLTGK 542
+ + GT Y+ PE +E + K+D+++ GVL E L GK
Sbjct: 161 --SRRTELCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 203
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 78/165 (47%), Gaps = 12/165 (7%)
Query: 378 VNGDVSKEIALLNKINHSNLIILSGVCFNEGNCYLVYEYAVNGTLSDWVFSNKNEGKYLD 437
V + +E+ + + + H N++ L G + YL+ EYA GT V+ + D
Sbjct: 52 VEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGT----VYRELQKLSKFD 107
Query: 438 WKQRIQIALDVATGLNYLHSFTNPPHVHKDINSSNVLLDSDLRAKIANFAMARPAEGQEG 497
++ ++A L+Y HS +H+DI N+LL S KIA+F + A
Sbjct: 108 EQRTATYITELANALSYCHSKRV---IHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR 164
Query: 498 EFALTRHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLILEMLTGK 542
+ + GT Y+ PE +E + K+D+++ GVL E L GK
Sbjct: 165 DT-----LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 204
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/248 (23%), Positives = 118/248 (47%), Gaps = 25/248 (10%)
Query: 376 KKVNGDVSKEIALLNKINHSNLIILSGVCFNEGNCYLVYEYAVNGTLSDWVFSNKNEGKY 435
+K D E +++ + +H N+I L GV +V E NG+L F K++ ++
Sbjct: 58 EKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDS--FLRKHDAQF 115
Query: 436 LDWKQRIQIALDVATGLNYLHSFTNPPHVHKDINSSNVLLDSDLRAKIANFAMARPAEGQ 495
Q + + +A+G+ YL ++ +VH+D+ + N+L++S+L K+++F ++R E
Sbjct: 116 TV-IQLVGMLRGIASGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDD 171
Query: 496 EGEFALTRHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLILEMLTGKEAAALHAEENNMH 555
TR + +PE + ++ DV+++G+++ E+++ E M
Sbjct: 172 PEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWE-----MS 226
Query: 556 LSDVLNAVLTKEDGEESLRHFIDPTLQGNYPLELALLVIRLIDACLKKDPTDRPTMYEIE 615
DV+ AV +E R + P P++ + +L+ C +KD +RP +I
Sbjct: 227 NQDVIKAV------DEGYR--LPP------PMDCPAALYQLMLDCWQKDRNNRPKFEQIV 272
Query: 616 HSLSNILN 623
L ++
Sbjct: 273 SILDKLIR 280
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 78/165 (47%), Gaps = 12/165 (7%)
Query: 378 VNGDVSKEIALLNKINHSNLIILSGVCFNEGNCYLVYEYAVNGTLSDWVFSNKNEGKYLD 437
V + +E+ + + + H N++ L G + YL+ EYA GT V+ + D
Sbjct: 53 VEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGT----VYRELQKLSKFD 108
Query: 438 WKQRIQIALDVATGLNYLHSFTNPPHVHKDINSSNVLLDSDLRAKIANFAMARPAEGQEG 497
++ ++A L+Y HS +H+DI N+LL S KIA+F + A
Sbjct: 109 EQRTATYITELANALSYCHSKRV---IHRDIKPENLLLGSAGELKIADFGWSVHAPS--- 162
Query: 498 EFALTRHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLILEMLTGK 542
+ + GT Y+ PE +E + K+D+++ GVL E L GK
Sbjct: 163 --SRRXXLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 205
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 78/165 (47%), Gaps = 12/165 (7%)
Query: 378 VNGDVSKEIALLNKINHSNLIILSGVCFNEGNCYLVYEYAVNGTLSDWVFSNKNEGKYLD 437
V + +E+ + + + H N++ L G + YL+ EYA GT V+ + D
Sbjct: 51 VEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGT----VYRELQKLSKFD 106
Query: 438 WKQRIQIALDVATGLNYLHSFTNPPHVHKDINSSNVLLDSDLRAKIANFAMARPAEGQEG 497
++ ++A L+Y HS +H+DI N+LL S KIA+F + A
Sbjct: 107 EQRTATYITELANALSYCHSKRV---IHRDIKPENLLLGSAGELKIADFGWSVHAPS--- 160
Query: 498 EFALTRHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLILEMLTGK 542
+ + GT Y+ PE +E + K+D+++ GVL E L GK
Sbjct: 161 --SRRXXLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 203
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 78/165 (47%), Gaps = 12/165 (7%)
Query: 378 VNGDVSKEIALLNKINHSNLIILSGVCFNEGNCYLVYEYAVNGTLSDWVFSNKNEGKYLD 437
V + +E+ + + + H N++ L G + YL+ EYA GT V+ + D
Sbjct: 77 VEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGT----VYRELQKLSKFD 132
Query: 438 WKQRIQIALDVATGLNYLHSFTNPPHVHKDINSSNVLLDSDLRAKIANFAMARPAEGQEG 497
++ ++A L+Y HS +H+DI N+LL S KIA+F + A
Sbjct: 133 EQRTATYITELANALSYCHSKRV---IHRDIKPENLLLGSAGELKIADFGWSVHAPS--- 186
Query: 498 EFALTRHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLILEMLTGK 542
+ + GT Y+ PE +E + K+D+++ GVL E L GK
Sbjct: 187 --SRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 229
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 61/271 (22%), Positives = 117/271 (43%), Gaps = 24/271 (8%)
Query: 366 GKINGGFAAIKKVNG-------DVSKEIALLNKINHSNLIILSGVCFNEG--NCYLVYEY 416
G G A+K++ D +EI +L ++ ++ GV + G + LV EY
Sbjct: 36 GDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRQSLRLVMEY 95
Query: 417 AVNGTLSDWVFSNKNEGKYLDWKQRIQIALDVATGLNYLHSFTNPPHVHKDINSSNVLLD 476
+G L D++ ++ LD + + + + G+ YL S VH+D+ + N+L++
Sbjct: 96 LPSGCLRDFLQRHRAR---LDASRLLLYSSQICKGMEYLGSRRC---VHRDLAARNILVE 149
Query: 477 SDLRAKIANFAMARPAEGQEGEFALTRHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLIL 536
S+ KIA+F +A+ + + + + APE L + + S + DV++FGV++
Sbjct: 150 SEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLY 209
Query: 537 EMLTGKEAAALHAEENNMHLSDVLNAVLTKEDGEESLRHFIDPTLQGNYPLELALL--VI 594
E+ T + +++ ++ L + + D R P A V
Sbjct: 210 ELFT-------YCDKSCSPSAEFLRMMGCERDVPALCRLLELLEEGQRLPAPPACPAEVH 262
Query: 595 RLIDACLKKDPTDRPTMYEIEHSLSNILNAS 625
L+ C P DRP+ + L + + S
Sbjct: 263 ELMKLCWAPSPQDRPSFSALGPQLDMLWSGS 293
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 78/165 (47%), Gaps = 12/165 (7%)
Query: 378 VNGDVSKEIALLNKINHSNLIILSGVCFNEGNCYLVYEYAVNGTLSDWVFSNKNEGKYLD 437
V + +E+ + + + H N++ L G + YL+ EYA GT V+ + D
Sbjct: 51 VEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGT----VYRELQKLSKFD 106
Query: 438 WKQRIQIALDVATGLNYLHSFTNPPHVHKDINSSNVLLDSDLRAKIANFAMARPAEGQEG 497
++ ++A L+Y HS +H+DI N+LL S KIA+F + A
Sbjct: 107 EQRTATYITELANALSYCHSKRV---IHRDIKPENLLLGSAGELKIADFGWSVHAPS--- 160
Query: 498 EFALTRHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLILEMLTGK 542
+ + GT Y+ PE +E + K+D+++ GVL E L GK
Sbjct: 161 --SRRTXLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 203
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 46/164 (28%), Positives = 78/164 (47%), Gaps = 12/164 (7%)
Query: 378 VNGDVSKEIALLNKINHSNLIILSGVCFNEGNCYLVYEYAVNGTLSDWVFSNKNEGKYLD 437
V + +E+ + + + H N++ L G + YL+ EYA GT V+ + D
Sbjct: 55 VEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGT----VYRELQKLSRFD 110
Query: 438 WKQRIQIALDVATGLNYLHSFTNPPHVHKDINSSNVLLDSDLRAKIANFAMARPAEGQEG 497
++ ++A L+Y HS +H+DI N+LL S+ KIA+F + A
Sbjct: 111 EQRTATYITELANALSYCHSKRV---IHRDIKPENLLLGSNGELKIADFGWSVHAPSSRR 167
Query: 498 EFALTRHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLILEMLTG 541
+ + GT Y+ PE +E + K+D+++ GVL E L G
Sbjct: 168 DT-----LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVG 206
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 78/165 (47%), Gaps = 12/165 (7%)
Query: 378 VNGDVSKEIALLNKINHSNLIILSGVCFNEGNCYLVYEYAVNGTLSDWVFSNKNEGKYLD 437
V + +E+ + + + H N++ L G + YL+ EYA GT V+ + D
Sbjct: 52 VEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGT----VYRELQKLSKFD 107
Query: 438 WKQRIQIALDVATGLNYLHSFTNPPHVHKDINSSNVLLDSDLRAKIANFAMARPAEGQEG 497
++ ++A L+Y HS +H+DI N+LL S KIA+F + A
Sbjct: 108 EQRTATYITELANALSYCHSKRV---IHRDIKPENLLLGSAGELKIADFGWSVHAPS--- 161
Query: 498 EFALTRHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLILEMLTGK 542
+ + GT Y+ PE +E + K+D+++ GVL E L GK
Sbjct: 162 --SRRTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 204
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 68/257 (26%), Positives = 116/257 (45%), Gaps = 31/257 (12%)
Query: 374 AIKKVN--------GDVSKEIALLNKINHSNLIILSGVCFNEGNCYLVYEYAVNGTLSDW 425
AIK++N ++ KEI +++ +H N++ + +LV + G++ D
Sbjct: 39 AIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYTSFVVKDELWLVMKLLSGGSVLDI 98
Query: 426 VFSNKNEGKY----LDWKQRIQIALDVATGLNYLHSFTNPPHVHKDINSSNVLLDSDLRA 481
+ +G++ LD I +V GL YLH +H+D+ + N+LL D
Sbjct: 99 IKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKNGQ---IHRDVKAGNILLGEDGSV 155
Query: 482 KIANFAMAR--PAEGQEGEFALTRHIVGTKGYMAPEYLENGL-VSTKLDVYAFGVLILEM 538
+IA+F ++ G + + VGT +MAPE +E K D+++FG+ +E+
Sbjct: 156 QIADFGVSAFLATGGDITRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIEL 215
Query: 539 LTGKEAAALHAEENNMHLSDVLNAVLTKEDGEESLRHFI-DPTLQGNYPLELALLVIRLI 597
TG AA H L +LT ++ SL + D + Y ++I
Sbjct: 216 ATG--AAPYHKYPPMKVL------MLTLQNDPPSLETGVQDKEMLKKYGKSFR----KMI 263
Query: 598 DACLKKDPTDRPTMYEI 614
CL+KDP RPT E+
Sbjct: 264 SLCLQKDPEKRPTAAEL 280
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 78/165 (47%), Gaps = 12/165 (7%)
Query: 378 VNGDVSKEIALLNKINHSNLIILSGVCFNEGNCYLVYEYAVNGTLSDWVFSNKNEGKYLD 437
V + +E+ + + + H N++ L G + YL+ EYA GT V+ + D
Sbjct: 51 VEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGT----VYRELQKLSKFD 106
Query: 438 WKQRIQIALDVATGLNYLHSFTNPPHVHKDINSSNVLLDSDLRAKIANFAMARPAEGQEG 497
++ ++A L+Y HS +H+DI N+LL S KIA+F + A
Sbjct: 107 EQRTATYITELANALSYCHSKRV---IHRDIKPENLLLGSAGELKIADFGWSVHAPS--- 160
Query: 498 EFALTRHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLILEMLTGK 542
+ + GT Y+ PE +E + K+D+++ GVL E L GK
Sbjct: 161 --SRRTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 203
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 78/165 (47%), Gaps = 12/165 (7%)
Query: 378 VNGDVSKEIALLNKINHSNLIILSGVCFNEGNCYLVYEYAVNGTLSDWVFSNKNEGKYLD 437
V + +E+ + + + H N++ L G + YL+ EYA GT V+ + D
Sbjct: 51 VEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGT----VYRELQKLSKFD 106
Query: 438 WKQRIQIALDVATGLNYLHSFTNPPHVHKDINSSNVLLDSDLRAKIANFAMARPAEGQEG 497
++ ++A L+Y HS +H+DI N+LL S KIA+F + A
Sbjct: 107 EQRTATYITELANALSYCHSKRV---IHRDIKPENLLLGSAGELKIADFGWSVHAPS--- 160
Query: 498 EFALTRHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLILEMLTGK 542
+ + GT Y+ PE +E + K+D+++ GVL E L GK
Sbjct: 161 --SRRTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 203
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 78/165 (47%), Gaps = 12/165 (7%)
Query: 378 VNGDVSKEIALLNKINHSNLIILSGVCFNEGNCYLVYEYAVNGTLSDWVFSNKNEGKYLD 437
V + +E+ + + + H N++ L G + YL+ EYA GT V+ + D
Sbjct: 51 VEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGT----VYRELQKLSKFD 106
Query: 438 WKQRIQIALDVATGLNYLHSFTNPPHVHKDINSSNVLLDSDLRAKIANFAMARPAEGQEG 497
++ ++A L+Y HS +H+DI N+LL S KIA+F + A
Sbjct: 107 EQRTATYITELANALSYCHSKRV---IHRDIKPENLLLGSAGELKIADFGWSVHAPS--- 160
Query: 498 EFALTRHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLILEMLTGK 542
+ + GT Y+ PE +E + K+D+++ GVL E L GK
Sbjct: 161 --SRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 203
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 78/165 (47%), Gaps = 12/165 (7%)
Query: 378 VNGDVSKEIALLNKINHSNLIILSGVCFNEGNCYLVYEYAVNGTLSDWVFSNKNEGKYLD 437
V + +E+ + + + H N++ L G + YL+ EYA GT V+ + D
Sbjct: 54 VEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGT----VYRELQKLSKFD 109
Query: 438 WKQRIQIALDVATGLNYLHSFTNPPHVHKDINSSNVLLDSDLRAKIANFAMARPAEGQEG 497
++ ++A L+Y HS +H+DI N+LL S KIA+F + A
Sbjct: 110 EQRTATYITELANALSYCHSKRV---IHRDIKPENLLLGSAGELKIADFGWSVHAPS--- 163
Query: 498 EFALTRHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLILEMLTGK 542
+ + GT Y+ PE +E + K+D+++ GVL E L GK
Sbjct: 164 --SRRXXLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 206
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 78/165 (47%), Gaps = 12/165 (7%)
Query: 378 VNGDVSKEIALLNKINHSNLIILSGVCFNEGNCYLVYEYAVNGTLSDWVFSNKNEGKYLD 437
V + +E+ + + + H N++ L G + YL+ EYA GT V+ + D
Sbjct: 56 VEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGT----VYRELQKLSKFD 111
Query: 438 WKQRIQIALDVATGLNYLHSFTNPPHVHKDINSSNVLLDSDLRAKIANFAMARPAEGQEG 497
++ ++A L+Y HS +H+DI N+LL S KIA+F + A
Sbjct: 112 EQRTATYITELANALSYCHSKRV---IHRDIKPENLLLGSAGELKIADFGWSVHAPS--- 165
Query: 498 EFALTRHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLILEMLTGK 542
+ + GT Y+ PE +E + K+D+++ GVL E L GK
Sbjct: 166 --SRRTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 208
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 58/248 (23%), Positives = 116/248 (46%), Gaps = 25/248 (10%)
Query: 376 KKVNGDVSKEIALLNKINHSNLIILSGVCFNEGNCYLVYEYAVNGTLSDWVFSNKNEGKY 435
+K D E +++ + +H N+I L GV +V E NG+L F K++ ++
Sbjct: 87 EKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDS--FLRKHDAQF 144
Query: 436 LDWKQRIQIALDVATGLNYLHSFTNPPHVHKDINSSNVLLDSDLRAKIANFAMARPAEGQ 495
Q + + +A+G+ YL +VH+D+ + N+L++S+L K+++F ++R E
Sbjct: 145 TV-IQLVGMLRGIASGMKYLSDMG---YVHRDLAARNILINSNLVCKVSDFGLSRVLEDD 200
Query: 496 EGEFALTRHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLILEMLTGKEAAALHAEENNMH 555
TR + +PE + ++ DV+++G+++ E+++ E M
Sbjct: 201 PEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWE-----MS 255
Query: 556 LSDVLNAVLTKEDGEESLRHFIDPTLQGNYPLELALLVIRLIDACLKKDPTDRPTMYEIE 615
DV+ AV +E R + P P++ + +L+ C +KD +RP +I
Sbjct: 256 NQDVIKAV------DEGYR--LPP------PMDCPAALYQLMLDCWQKDRNNRPKFEQIV 301
Query: 616 HSLSNILN 623
L ++
Sbjct: 302 SILDKLIR 309
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 77/165 (46%), Gaps = 12/165 (7%)
Query: 378 VNGDVSKEIALLNKINHSNLIILSGVCFNEGNCYLVYEYAVNGTLSDWVFSNKNEGKYLD 437
V + +E+ + + + H N++ L G + YL+ EYA G V+ + D
Sbjct: 56 VEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPRGE----VYKELQKLSKFD 111
Query: 438 WKQRIQIALDVATGLNYLHSFTNPPHVHKDINSSNVLLDSDLRAKIANFAMARPAEGQEG 497
++ ++A L+Y HS +H+DI N+LL S KIA+F + A
Sbjct: 112 EQRTATYITELANALSYCHSKRV---IHRDIKPENLLLGSAGELKIADFGWSVHAPS--- 165
Query: 498 EFALTRHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLILEMLTGK 542
+ + GT Y+ PE +E + K+D+++ GVL E L GK
Sbjct: 166 --SRRXXLXGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 208
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 78/165 (47%), Gaps = 12/165 (7%)
Query: 378 VNGDVSKEIALLNKINHSNLIILSGVCFNEGNCYLVYEYAVNGTLSDWVFSNKNEGKYLD 437
V + +E+ + + + H N++ L G + YL+ EYA GT V+ + D
Sbjct: 56 VEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGT----VYRELQKLSKFD 111
Query: 438 WKQRIQIALDVATGLNYLHSFTNPPHVHKDINSSNVLLDSDLRAKIANFAMARPAEGQEG 497
++ ++A L+Y HS +H+DI N+LL S KIA+F + A
Sbjct: 112 EQRTATYITELANALSYCHSKRV---IHRDIKPENLLLGSAGELKIADFGWSVHAPS--- 165
Query: 498 EFALTRHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLILEMLTGK 542
+ + GT Y+ PE +E + K+D+++ GVL E L GK
Sbjct: 166 --SRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 208
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 78/165 (47%), Gaps = 12/165 (7%)
Query: 378 VNGDVSKEIALLNKINHSNLIILSGVCFNEGNCYLVYEYAVNGTLSDWVFSNKNEGKYLD 437
V + +E+ + + + H N++ L G + YL+ EYA GT V+ + D
Sbjct: 54 VEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGT----VYRELQKLSKFD 109
Query: 438 WKQRIQIALDVATGLNYLHSFTNPPHVHKDINSSNVLLDSDLRAKIANFAMARPAEGQEG 497
++ ++A L+Y HS +H+DI N+LL S KIA+F + A
Sbjct: 110 EQRTATYITELANALSYCHSKRV---IHRDIKPENLLLGSAGELKIADFGWSVHAPS--- 163
Query: 498 EFALTRHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLILEMLTGK 542
+ + GT Y+ PE +E + K+D+++ GVL E L GK
Sbjct: 164 --SRRAALCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 206
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 61/271 (22%), Positives = 118/271 (43%), Gaps = 24/271 (8%)
Query: 366 GKINGGFAAIKKVNG-------DVSKEIALLNKINHSNLIILSGVCFNEG--NCYLVYEY 416
G G A+K++ D +EI +L ++ ++ GV + G + LV EY
Sbjct: 35 GDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRQSLRLVMEY 94
Query: 417 AVNGTLSDWVFSNKNEGKYLDWKQRIQIALDVATGLNYLHSFTNPPHVHKDINSSNVLLD 476
+G L D++ ++ LD + + + + G+ YL S VH+D+ + N+L++
Sbjct: 95 LPSGCLRDFLQRHRAR---LDASRLLLYSSQICKGMEYLGSRRC---VHRDLAARNILVE 148
Query: 477 SDLRAKIANFAMARPAEGQEGEFALTRHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLIL 536
S+ KIA+F +A+ + + + + APE L + + S + DV++FGV++
Sbjct: 149 SEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLY 208
Query: 537 EMLTGKEAAALHAEENNMHLSDVLNAVLTKEDGEESLRHFIDPTLQGNYPLELALL--VI 594
E+ T + +++ ++ L + ++ D R P A V
Sbjct: 209 ELFT-------YCDKSCSPSAEFLRMMGSERDVPALSRLLELLEEGQRLPAPPACPAEVH 261
Query: 595 RLIDACLKKDPTDRPTMYEIEHSLSNILNAS 625
L+ C P DRP+ + L + + S
Sbjct: 262 ELMKLCWAPSPQDRPSFSALGPQLDMLWSGS 292
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 77/165 (46%), Gaps = 12/165 (7%)
Query: 378 VNGDVSKEIALLNKINHSNLIILSGVCFNEGNCYLVYEYAVNGTLSDWVFSNKNEGKYLD 437
V + +E+ + + + H N++ L G + YL+ EYA GT V+ + D
Sbjct: 51 VEHQLRREVEIQSHLRHPNILRLYGYFHDSTRVYLILEYAPLGT----VYRELQKLSKFD 106
Query: 438 WKQRIQIALDVATGLNYLHSFTNPPHVHKDINSSNVLLDSDLRAKIANFAMARPAEGQEG 497
++ ++A L+Y HS +H+DI N+LL S KIA+F + A
Sbjct: 107 EQRTATYITELANALSYCHSKKV---IHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR 163
Query: 498 EFALTRHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLILEMLTGK 542
+ GT Y+ PE +E + K+D+++ GVL E L GK
Sbjct: 164 AA-----LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 203
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 94/202 (46%), Gaps = 37/202 (18%)
Query: 361 GSVY--RGKINGGFAAIKKVNGDVS---------KEIALLNKINHSNLIILSGVCFNEGN 409
G VY R K+ G A+KK+ D +EI+LL ++NH N++ L V E
Sbjct: 17 GVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENK 76
Query: 410 CYLVYEYAVNGTLSDWVFSNKNEGKYLDWKQRIQIAL--------DVATGLNYLHSFTNP 461
YLV+E F +++ K++D I L + GL++ HS
Sbjct: 77 LYLVFE-----------FLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLSFCHSHRV- 124
Query: 462 PHVHKDINSSNVLLDSDLRAKIANFAMARPAEGQEGEFALTRHIVGTKGYMAPEYLEN-G 520
+H+D+ N+L++++ K+A+F +AR + H V T Y APE L
Sbjct: 125 --LHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYT---HEVVTLWYRAPEILLGCK 179
Query: 521 LVSTKLDVYAFGVLILEMLTGK 542
ST +D+++ G + EM+T +
Sbjct: 180 YYSTAVDIWSLGCIFAEMVTRR 201
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 78/165 (47%), Gaps = 12/165 (7%)
Query: 378 VNGDVSKEIALLNKINHSNLIILSGVCFNEGNCYLVYEYAVNGTLSDWVFSNKNEGKYLD 437
V + +E+ + + + H N++ L G + YL+ EYA GT V+ + D
Sbjct: 50 VEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGT----VYRELQKLSKFD 105
Query: 438 WKQRIQIALDVATGLNYLHSFTNPPHVHKDINSSNVLLDSDLRAKIANFAMARPAEGQEG 497
++ ++A L+Y HS +H+DI N+LL S KIA+F + A
Sbjct: 106 EQRTATYITELANALSYCHSKRV---IHRDIKPENLLLGSAGELKIADFGWSVHAPS--- 159
Query: 498 EFALTRHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLILEMLTGK 542
+ + GT Y+ PE +E + K+D+++ GVL E L GK
Sbjct: 160 --SRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 202
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 47/184 (25%), Positives = 90/184 (48%), Gaps = 15/184 (8%)
Query: 366 GKINGGFAAIKKVNG-------DVSKEIALLNKINHSNLIILSGVCFNEG--NCYLVYEY 416
G G A+K++ D +EI +L ++ ++ GV + G + LV EY
Sbjct: 48 GDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRQSLRLVMEY 107
Query: 417 AVNGTLSDWVFSNKNEGKYLDWKQRIQIALDVATGLNYLHSFTNPPHVHKDINSSNVLLD 476
+G L D++ ++ LD + + + + G+ YL S VH+D+ + N+L++
Sbjct: 108 LPSGCLRDFLQRHRAR---LDASRLLLYSSQICKGMEYLGSRRC---VHRDLAARNILVE 161
Query: 477 SDLRAKIANFAMARPAEGQEGEFALTRHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLIL 536
S+ KIA+F +A+ + + + + APE L + + S + DV++FGV++
Sbjct: 162 SEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLY 221
Query: 537 EMLT 540
E+ T
Sbjct: 222 ELFT 225
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 68/257 (26%), Positives = 116/257 (45%), Gaps = 31/257 (12%)
Query: 374 AIKKVN--------GDVSKEIALLNKINHSNLIILSGVCFNEGNCYLVYEYAVNGTLSDW 425
AIK++N ++ KEI +++ +H N++ + +LV + G++ D
Sbjct: 44 AIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYTSFVVKDELWLVMKLLSGGSVLDI 103
Query: 426 VFSNKNEGKY----LDWKQRIQIALDVATGLNYLHSFTNPPHVHKDINSSNVLLDSDLRA 481
+ +G++ LD I +V GL YLH +H+D+ + N+LL D
Sbjct: 104 IKHIVAKGEHKSGVLDESTIATILREVLEGLEYLH---KNGQIHRDVKAGNILLGEDGSV 160
Query: 482 KIANFAMAR--PAEGQEGEFALTRHIVGTKGYMAPEYLENGL-VSTKLDVYAFGVLILEM 538
+IA+F ++ G + + VGT +MAPE +E K D+++FG+ +E+
Sbjct: 161 QIADFGVSAFLATGGDITRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIEL 220
Query: 539 LTGKEAAALHAEENNMHLSDVLNAVLTKEDGEESLRHFI-DPTLQGNYPLELALLVIRLI 597
TG AA H L +LT ++ SL + D + Y ++I
Sbjct: 221 ATG--AAPYHKYPPMKVL------MLTLQNDPPSLETGVQDKEMLKKYGKSFR----KMI 268
Query: 598 DACLKKDPTDRPTMYEI 614
CL+KDP RPT E+
Sbjct: 269 SLCLQKDPEKRPTAAEL 285
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 78/165 (47%), Gaps = 12/165 (7%)
Query: 378 VNGDVSKEIALLNKINHSNLIILSGVCFNEGNCYLVYEYAVNGTLSDWVFSNKNEGKYLD 437
V + +E+ + + + H N++ L G + YL+ EYA GT V+ + D
Sbjct: 54 VEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGT----VYRELQKLSKFD 109
Query: 438 WKQRIQIALDVATGLNYLHSFTNPPHVHKDINSSNVLLDSDLRAKIANFAMARPAEGQEG 497
++ ++A L+Y HS +H+DI N+LL S KIA+F + A
Sbjct: 110 EQRTATYITELANALSYCHSKRV---IHRDIKPENLLLGSAGELKIADFGWSVHAPS--- 163
Query: 498 EFALTRHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLILEMLTGK 542
+ + GT Y+ PE +E + K+D+++ GVL E L GK
Sbjct: 164 --SRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 206
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 77/165 (46%), Gaps = 12/165 (7%)
Query: 378 VNGDVSKEIALLNKINHSNLIILSGVCFNEGNCYLVYEYAVNGTLSDWVFSNKNEGKYLD 437
V + +E+ + + + H N++ L G + YL+ EYA GT V+ + D
Sbjct: 51 VEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGT----VYRELQKLSKFD 106
Query: 438 WKQRIQIALDVATGLNYLHSFTNPPHVHKDINSSNVLLDSDLRAKIANFAMARPAEGQEG 497
++ ++A L+Y HS +H+DI N+LL S KIA+F + A
Sbjct: 107 EQRTATYITELANALSYCHSKRV---IHRDIKPENLLLGSAGELKIADFGWSVHAPSSR- 162
Query: 498 EFALTRHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLILEMLTGK 542
+ GT Y+ PE +E + K+D+++ GVL E L GK
Sbjct: 163 ----RAALCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 203
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 53/199 (26%), Positives = 91/199 (45%), Gaps = 20/199 (10%)
Query: 385 EIALLNKINHSNLIILSGVCFNEGNC--YLVYEYAVNGTLSDWVFSNKNEGKYLDWKQRI 442
E+ LL ++ H N++ + N Y+V EY G L+ + E +YLD + +
Sbjct: 55 EVNLLRELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVL 114
Query: 443 QIALDVATGLNYLHSFTNPPH--VHKDINSSNVLLDSDLRAKIANFAMARPAEGQEGEFA 500
++ + L H ++ H +H+D+ +NV LD K+ +F +AR + FA
Sbjct: 115 RVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARIL-NHDTSFA 173
Query: 501 LTRHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLILEM---------LTGKEAAALHAEE 551
T VGT YM+PE + + K D+++ G L+ E+ + KE A E
Sbjct: 174 KT--FVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQKELAGKIREG 231
Query: 552 NNMHL----SDVLNAVLTK 566
+ SD LN ++T+
Sbjct: 232 KFRRIPYRYSDELNEIITR 250
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 77/165 (46%), Gaps = 12/165 (7%)
Query: 378 VNGDVSKEIALLNKINHSNLIILSGVCFNEGNCYLVYEYAVNGTLSDWVFSNKNEGKYLD 437
V + +E+ + + + H N++ L G + YL+ EYA GT V+ + D
Sbjct: 55 VEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGT----VYRELQKLSKFD 110
Query: 438 WKQRIQIALDVATGLNYLHSFTNPPHVHKDINSSNVLLDSDLRAKIANFAMARPAEGQEG 497
++ ++A L+Y HS +H+DI N+LL S KIA+F + A
Sbjct: 111 EQRTATYITELANALSYCHSKRV---IHRDIKPENLLLGSAGELKIADFGWSVHAPSSR- 166
Query: 498 EFALTRHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLILEMLTGK 542
+ GT Y+ PE +E + K+D+++ GVL E L GK
Sbjct: 167 ----RTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 207
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 57/194 (29%), Positives = 95/194 (48%), Gaps = 21/194 (10%)
Query: 361 GSVY--RGKINGGFAAIKKVNGDVS---------KEIALLNKINHSNLIILSGVCFNEGN 409
G VY R K+ G A+KK+ D +EI+LL ++NH N++ L V E
Sbjct: 17 GVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENK 76
Query: 410 CYLVYEYAVNGTLSDWVFSNKNEGKYLDWKQRIQIALDVATGLNYLHSFTNPPHVHKDIN 469
YLV+E+ ++ L D++ ++ G L + L GL + HS +H+D+
Sbjct: 77 LYLVFEF-LHQDLKDFMDASALTGIPLPLIKSYLFQL--LQGLAFCHSHRV---LHRDLK 130
Query: 470 SSNVLLDSDLRAKIANFAMARPAEGQEGEFALTRHIVGTKGYMAPEYLEN-GLVSTKLDV 528
N+L++++ K+A+F +AR + H V T Y APE L ST +D+
Sbjct: 131 PENLLINTEGAIKLADFGLARAFGVPVRTYX---HEVVTLWYRAPEILLGCKYYSTAVDI 187
Query: 529 YAFGVLILEMLTGK 542
++ G + EM+T +
Sbjct: 188 WSLGCIFAEMVTRR 201
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 78/165 (47%), Gaps = 12/165 (7%)
Query: 378 VNGDVSKEIALLNKINHSNLIILSGVCFNEGNCYLVYEYAVNGTLSDWVFSNKNEGKYLD 437
V + +E+ + + + H N++ L G + YL+ EYA GT V+ + D
Sbjct: 48 VEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGT----VYRELQKLSKFD 103
Query: 438 WKQRIQIALDVATGLNYLHSFTNPPHVHKDINSSNVLLDSDLRAKIANFAMARPAEGQEG 497
++ ++A L+Y HS +H+DI N+LL S KIA+F + A
Sbjct: 104 EQRTATYITELANALSYCHSKRV---IHRDIKPENLLLGSAGELKIADFGWSVHAPS--- 157
Query: 498 EFALTRHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLILEMLTGK 542
+ + GT Y+ PE +E + K+D+++ GVL E L GK
Sbjct: 158 --SRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 200
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 78/165 (47%), Gaps = 12/165 (7%)
Query: 378 VNGDVSKEIALLNKINHSNLIILSGVCFNEGNCYLVYEYAVNGTLSDWVFSNKNEGKYLD 437
V + +E+ + + + H N++ L G + YL+ EYA GT V+ + D
Sbjct: 68 VEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGT----VYRELQKLSKFD 123
Query: 438 WKQRIQIALDVATGLNYLHSFTNPPHVHKDINSSNVLLDSDLRAKIANFAMARPAEGQEG 497
++ ++A L+Y HS +H+DI N+LL S KIA+F + A
Sbjct: 124 EQRTATYITELANALSYCHSKRV---IHRDIKPENLLLGSAGELKIADFGWSVHAPS--- 177
Query: 498 EFALTRHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLILEMLTGK 542
+ + GT Y+ PE +E + K+D+++ GVL E L GK
Sbjct: 178 --SRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 220
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 50/180 (27%), Positives = 89/180 (49%), Gaps = 17/180 (9%)
Query: 374 AIKKVNGDVSKEIALLNKI-NHSNLIILSGVCFNEGNCYLVYEYAVNGTLSDWVFSNKNE 432
A +K D+ E+ ++ I H N+I L G C +G Y++ YA G L +++ + +
Sbjct: 79 ATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVAYASKGNLREYLRARRPP 138
Query: 433 G------------KYLDWKQRIQIALDVATGLNYLHSFTNPPHVHKDINSSNVLLDSDLR 480
G + + +K + +A G+ YL S +H+D+ + NVL+ +
Sbjct: 139 GMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKC---IHRDLAARNVLVTENNV 195
Query: 481 AKIANFAMARPAEGQEGEFALTRHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLILEMLT 540
KIA+F +AR + T + K +MAPE L + + + + DV++FGVL+ E+ T
Sbjct: 196 MKIADFGLARDINNIDYYKKTTNGRLPVK-WMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 78/165 (47%), Gaps = 12/165 (7%)
Query: 378 VNGDVSKEIALLNKINHSNLIILSGVCFNEGNCYLVYEYAVNGTLSDWVFSNKNEGKYLD 437
V + +E+ + + + H N++ L G + YL+ EYA GT V+ + D
Sbjct: 54 VEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGT----VYRELQKLSKFD 109
Query: 438 WKQRIQIALDVATGLNYLHSFTNPPHVHKDINSSNVLLDSDLRAKIANFAMARPAEGQEG 497
++ ++A L+Y HS +H+DI N+LL S KIA+F + A
Sbjct: 110 EQRTATYITELANALSYCHSKRV---IHRDIKPENLLLGSAGELKIADFGWSVHAPS--- 163
Query: 498 EFALTRHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLILEMLTGK 542
+ + GT Y+ PE +E + K+D+++ GVL E L GK
Sbjct: 164 --SRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 206
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 77/165 (46%), Gaps = 12/165 (7%)
Query: 378 VNGDVSKEIALLNKINHSNLIILSGVCFNEGNCYLVYEYAVNGTLSDWVFSNKNEGKYLD 437
V + +E+ + + + H N++ L G + YL+ EYA G V+ + D
Sbjct: 56 VEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPRGE----VYKELQKLSKFD 111
Query: 438 WKQRIQIALDVATGLNYLHSFTNPPHVHKDINSSNVLLDSDLRAKIANFAMARPAEGQEG 497
++ ++A L+Y HS +H+DI N+LL S KIA+F + A
Sbjct: 112 EQRTATYITELANALSYCHSKRV---IHRDIKPENLLLGSAGELKIADFGWSVHAPS--- 165
Query: 498 EFALTRHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLILEMLTGK 542
+ + GT Y+ PE +E + K+D+++ GVL E L GK
Sbjct: 166 --SRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 208
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 58/249 (23%), Positives = 120/249 (48%), Gaps = 27/249 (10%)
Query: 376 KKVNGDVSKEIALLNKINHSNLIILSGVCFNEGNCYLVYEYAVNGTLSDWVFSNKNEGKY 435
+K D E +++ + +H N++ L GV +V E+ NG L F K++G++
Sbjct: 85 EKQRRDFLCEASIMGQFDHPNVVHLEGVVTRGKPVMIVIEFMENGALD--AFLRKHDGQF 142
Query: 436 LDWKQRIQIALDVATGLNYLHSFTNPPHVHKDINSSNVLLDSDLRAKIANFAMARPAEGQ 495
Q + + +A G+ YL +VH+D+ + N+L++S+L K+++F ++R E
Sbjct: 143 TV-IQLVGMLRGIAAGMRYLADMG---YVHRDLAARNILVNSNLVCKVSDFGLSRVIEDD 198
Query: 496 -EGEFALTRHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLILEMLTGKEAAALHAEENNM 554
E + T + + + APE ++ ++ DV+++G+++ E+++ E +M
Sbjct: 199 PEAVYTTTGGKIPVR-WTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERPYW-----DM 252
Query: 555 HLSDVLNAVLTKEDGEESLRHFIDPTLQGNYPLELALLVIRLIDACLKKDPTDRPTMYEI 614
DV+ A+ EE R P P++ + +L+ C +K+ +RP +I
Sbjct: 253 SNQDVIKAI------EEGYRL---PA-----PMDCPAGLHQLMLDCWQKERAERPKFEQI 298
Query: 615 EHSLSNILN 623
L ++
Sbjct: 299 VGILDKMIR 307
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 57/194 (29%), Positives = 95/194 (48%), Gaps = 21/194 (10%)
Query: 361 GSVY--RGKINGGFAAIKKVNGDVS---------KEIALLNKINHSNLIILSGVCFNEGN 409
G VY R K+ G A+KK+ D +EI+LL ++NH N++ L V E
Sbjct: 20 GVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENK 79
Query: 410 CYLVYEYAVNGTLSDWVFSNKNEGKYLDWKQRIQIALDVATGLNYLHSFTNPPHVHKDIN 469
YLV+E+ ++ L D++ ++ G L + L GL + HS +H+D+
Sbjct: 80 LYLVFEF-LSMDLKDFMDASALTGIPLPLIKSYLFQL--LQGLAFCHSHRV---LHRDLK 133
Query: 470 SSNVLLDSDLRAKIANFAMARPAEGQEGEFALTRHIVGTKGYMAPEYLEN-GLVSTKLDV 528
N+L++++ K+A+F +AR + H V T Y APE L ST +D+
Sbjct: 134 PQNLLINTEGAIKLADFGLARAFGVPVRTYX---HEVVTLWYRAPEILLGCKYYSTAVDI 190
Query: 529 YAFGVLILEMLTGK 542
++ G + EM+T +
Sbjct: 191 WSLGCIFAEMVTRR 204
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 50/183 (27%), Positives = 83/183 (45%), Gaps = 13/183 (7%)
Query: 378 VNGDVSKEIALLNKINHSNLIILSGVCFNEGNCYLVYEYAVNGTLSDWVFSNKNEGKYLD 437
V + +E+ + + + H N++ L G + YL+ EYA GT V+ + D
Sbjct: 55 VEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGT----VYRELQKLSRFD 110
Query: 438 WKQRIQIALDVATGLNYLHSFTNPPHVHKDINSSNVLLDSDLRAKIANFAMARPAEGQEG 497
++ ++A L+Y HS +H+DI N+LL S+ KIA+F + A
Sbjct: 111 EQRTATYITELANALSYCHSKRV---IHRDIKPENLLLGSNGELKIADFGWSVHAPSSRR 167
Query: 498 EFALTRHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLILEMLTGKEAAALHA-EENNMHL 556
+ GT Y+ PE +E + K+D+++ GVL E L G H +E +
Sbjct: 168 TT-----LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGMPPFEAHTYQETYRRI 222
Query: 557 SDV 559
S V
Sbjct: 223 SRV 225
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 61/271 (22%), Positives = 115/271 (42%), Gaps = 24/271 (8%)
Query: 366 GKINGGFAAIKKVN-------GDVSKEIALLNKINHSNLIILSGVCFNEGN--CYLVYEY 416
G G A+K++ D +EI +L ++ ++ GV + G LV EY
Sbjct: 32 GDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRPELRLVMEY 91
Query: 417 AVNGTLSDWVFSNKNEGKYLDWKQRIQIALDVATGLNYLHSFTNPPHVHKDINSSNVLLD 476
+G L D++ ++ LD + + + + G+ YL S VH+D+ + N+L++
Sbjct: 92 LPSGCLRDFLQRHRAR---LDASRLLLYSSQICKGMEYLGSRRC---VHRDLAARNILVE 145
Query: 477 SDLRAKIANFAMARPAEGQEGEFALTRHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLIL 536
S+ KIA+F +A+ + + + APE L + + S + DV++FGV++
Sbjct: 146 SEAHVKIADFGLAKLLPLDKDXXVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLY 205
Query: 537 EMLTGKEAAALHAEENNMHLSDVLNAVLTKEDGEESLRHFIDPTLQGNYPLELALL--VI 594
E+ T + +++ ++ L + + D R P A V
Sbjct: 206 ELFT-------YCDKSCSPSAEFLRMMGCERDVPALCRLLELLEEGQRLPAPPACPAEVH 258
Query: 595 RLIDACLKKDPTDRPTMYEIEHSLSNILNAS 625
L+ C P DRP+ + L + + S
Sbjct: 259 ELMKLCWAPSPQDRPSFSALGPQLDMLWSGS 289
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 93/202 (46%), Gaps = 37/202 (18%)
Query: 361 GSVY--RGKINGGFAAIKKVNGDVS---------KEIALLNKINHSNLIILSGVCFNEGN 409
G VY R K+ G A+KK+ D +EI+LL ++NH N++ L V E
Sbjct: 17 GVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENK 76
Query: 410 CYLVYEYAVNGTLSDWVFSNKNEGKYLDWKQRIQIAL--------DVATGLNYLHSFTNP 461
YLV+E F +++ K++D I L + GL + HS
Sbjct: 77 LYLVFE-----------FLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRV- 124
Query: 462 PHVHKDINSSNVLLDSDLRAKIANFAMARPAEGQEGEFALTRHIVGTKGYMAPEYLEN-G 520
+H+D+ N+L++++ K+A+F +AR + H V T Y APE L
Sbjct: 125 --LHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYT---HEVVTLWYRAPEILLGCK 179
Query: 521 LVSTKLDVYAFGVLILEMLTGK 542
ST +D+++ G + EM+T +
Sbjct: 180 YYSTAVDIWSLGCIFAEMVTRR 201
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 93/202 (46%), Gaps = 37/202 (18%)
Query: 361 GSVY--RGKINGGFAAIKKVNGDVS---------KEIALLNKINHSNLIILSGVCFNEGN 409
G VY R K+ G A+KK+ D +EI+LL ++NH N++ L V E
Sbjct: 16 GVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENK 75
Query: 410 CYLVYEYAVNGTLSDWVFSNKNEGKYLDWKQRIQIAL--------DVATGLNYLHSFTNP 461
YLV+E F +++ K++D I L + GL + HS
Sbjct: 76 LYLVFE-----------FLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRV- 123
Query: 462 PHVHKDINSSNVLLDSDLRAKIANFAMARPAEGQEGEFALTRHIVGTKGYMAPEYLEN-G 520
+H+D+ N+L++++ K+A+F +AR + H V T Y APE L
Sbjct: 124 --LHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYT---HEVVTLWYRAPEILLGCK 178
Query: 521 LVSTKLDVYAFGVLILEMLTGK 542
ST +D+++ G + EM+T +
Sbjct: 179 YYSTAVDIWSLGCIFAEMVTRR 200
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 57/194 (29%), Positives = 95/194 (48%), Gaps = 21/194 (10%)
Query: 361 GSVY--RGKINGGFAAIKKVNGDVS---------KEIALLNKINHSNLIILSGVCFNEGN 409
G VY R K+ G A+KK+ D +EI+LL ++NH N++ L V E
Sbjct: 19 GVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENK 78
Query: 410 CYLVYEYAVNGTLSDWVFSNKNEGKYLDWKQRIQIALDVATGLNYLHSFTNPPHVHKDIN 469
YLV+E+ ++ L D++ ++ G L + L GL + HS +H+D+
Sbjct: 79 LYLVFEF-LSMDLKDFMDASALTGIPLPLIKSYLFQL--LQGLAFCHSHRV---LHRDLK 132
Query: 470 SSNVLLDSDLRAKIANFAMARPAEGQEGEFALTRHIVGTKGYMAPEYLEN-GLVSTKLDV 528
N+L++++ K+A+F +AR + H V T Y APE L ST +D+
Sbjct: 133 PQNLLINTEGAIKLADFGLARAFGVPVRTYX---HEVVTLWYRAPEILLGCKYYSTAVDI 189
Query: 529 YAFGVLILEMLTGK 542
++ G + EM+T +
Sbjct: 190 WSLGCIFAEMVTRR 203
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 64/269 (23%), Positives = 114/269 (42%), Gaps = 40/269 (14%)
Query: 374 AIKKVNGDVSKEIALLNKI-NHSNLIILSGVCFNEGNCYLVYEYAVNGTLSDWVFSNKNE 432
A +K D+ E+ ++ I H N+I L G C +G Y++ YA G L +++ + +
Sbjct: 79 ATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVGYASKGNLREYLRARRPP 138
Query: 433 G------------KYLDWKQRIQIALDVATGLNYLHSFTNPPHVHKDINSSNVLLDSDLR 480
G + + +K + +A G+ YL S +H+D+ + NVL+ +
Sbjct: 139 GMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKC---IHRDLAARNVLVTENNV 195
Query: 481 AKIANFAMARPAEGQEGEFALTRHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLILEMLT 540
KIA+F +AR + T + K +MAPE L + + + + DV++FGVL+ E+ T
Sbjct: 196 MKIADFGLARDINNIDYYKKTTNGRLPVK-WMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
Query: 541 --GKEAAALHAEENNMHLSDVLNAVLTKEDGEESLRHFIDPTLQGNYPLELALLVIRLID 598
G + EE L + + + P + ++
Sbjct: 255 LGGSPYPGIPVEE---------------------LFKLLKEGHRMDKPANCTNELYMMMR 293
Query: 599 ACLKKDPTDRPTMYEIEHSLSNILNASLN 627
C P+ RPT ++ L IL + N
Sbjct: 294 DCWHAVPSQRPTFKQLVEDLDRILTLTTN 322
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 78/165 (47%), Gaps = 12/165 (7%)
Query: 378 VNGDVSKEIALLNKINHSNLIILSGVCFNEGNCYLVYEYAVNGTLSDWVFSNKNEGKYLD 437
V + +E+ + + + H N++ L G + YL+ EYA GT V+ + D
Sbjct: 52 VEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGT----VYRELQKLSKFD 107
Query: 438 WKQRIQIALDVATGLNYLHSFTNPPHVHKDINSSNVLLDSDLRAKIANFAMARPAEGQEG 497
++ ++A L+Y HS +H+DI N+LL S KIA+F + A
Sbjct: 108 EQRTATYITELANALSYCHSKRV---IHRDIKPENLLLGSAGELKIADFGWSCHAPS--- 161
Query: 498 EFALTRHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLILEMLTGK 542
+ + GT Y+ PE +E + K+D+++ GVL E L GK
Sbjct: 162 --SRRTTLSGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 204
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 52/183 (28%), Positives = 87/183 (47%), Gaps = 20/183 (10%)
Query: 369 NGGFAAIKKVNGDV--------SKEIALLNKINHSNLIILSGVCFNEG--NCYLVYEYAV 418
G A+K + D +EI +L + H ++I G C + G + LV EY
Sbjct: 59 TGEMVAVKALKADAGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDAGAASLQLVMEYVP 118
Query: 419 NGTLSDWVFSNKNEGKYLDWKQRIQIALDVATGLNYLHSFTNPPHVHKDINSSNVLLDSD 478
G+L D++ + + Q + A + G+ YLH+ ++H+D+ + NVLLD+D
Sbjct: 119 LGSLRDYLPRHS-----IGLAQLLLFAQQICEGMAYLHAQH---YIHRDLAARNVLLDND 170
Query: 479 LRAKIANFAMARPA-EGQEGEFALTRHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLILE 537
KI +F +A+ EG E + + + APE L+ DV++FGV + E
Sbjct: 171 RLVKIGDFGLAKAVPEGHE-XYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYE 229
Query: 538 MLT 540
+LT
Sbjct: 230 LLT 232
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 93/202 (46%), Gaps = 37/202 (18%)
Query: 361 GSVY--RGKINGGFAAIKKVNGDVS---------KEIALLNKINHSNLIILSGVCFNEGN 409
G VY R K+ G A+KK+ D +EI+LL ++NH N++ L V E
Sbjct: 24 GVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENK 83
Query: 410 CYLVYEYAVNGTLSDWVFSNKNEGKYLDWKQRIQIAL--------DVATGLNYLHSFTNP 461
YLV+E F +++ K++D I L + GL + HS
Sbjct: 84 LYLVFE-----------FLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRV- 131
Query: 462 PHVHKDINSSNVLLDSDLRAKIANFAMARPAEGQEGEFALTRHIVGTKGYMAPEYLEN-G 520
+H+D+ N+L++++ K+A+F +AR + H V T Y APE L
Sbjct: 132 --LHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYT---HEVVTLWYRAPEILLGCK 186
Query: 521 LVSTKLDVYAFGVLILEMLTGK 542
ST +D+++ G + EM+T +
Sbjct: 187 YYSTAVDIWSLGCIFAEMVTRR 208
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 93/202 (46%), Gaps = 37/202 (18%)
Query: 361 GSVY--RGKINGGFAAIKKVNGDVS---------KEIALLNKINHSNLIILSGVCFNEGN 409
G VY R K+ G A+KK+ D +EI+LL ++NH N++ L V E
Sbjct: 17 GVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENK 76
Query: 410 CYLVYEYAVNGTLSDWVFSNKNEGKYLDWKQRIQIAL--------DVATGLNYLHSFTNP 461
YLV+E F +++ K++D I L + GL + HS
Sbjct: 77 LYLVFE-----------FLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRV- 124
Query: 462 PHVHKDINSSNVLLDSDLRAKIANFAMARPAEGQEGEFALTRHIVGTKGYMAPE-YLENG 520
+H+D+ N+L++++ K+A+F +AR + H V T Y APE L
Sbjct: 125 --LHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYT---HEVVTLWYRAPEILLGXK 179
Query: 521 LVSTKLDVYAFGVLILEMLTGK 542
ST +D+++ G + EM+T +
Sbjct: 180 YYSTAVDIWSLGCIFAEMVTRR 201
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 93/202 (46%), Gaps = 37/202 (18%)
Query: 361 GSVY--RGKINGGFAAIKKVNGDVS---------KEIALLNKINHSNLIILSGVCFNEGN 409
G VY R K+ G A+KK+ D +EI+LL ++NH N++ L V E
Sbjct: 17 GVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENK 76
Query: 410 CYLVYEYAVNGTLSDWVFSNKNEGKYLDWKQRIQIAL--------DVATGLNYLHSFTNP 461
YLV+E F +++ K++D I L + GL + HS
Sbjct: 77 LYLVFE-----------FLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRV- 124
Query: 462 PHVHKDINSSNVLLDSDLRAKIANFAMARPAEGQEGEFALTRHIVGTKGYMAPEYLEN-G 520
+H+D+ N+L++++ K+A+F +AR + H V T Y APE L
Sbjct: 125 --LHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYX---HEVVTLWYRAPEILLGCK 179
Query: 521 LVSTKLDVYAFGVLILEMLTGK 542
ST +D+++ G + EM+T +
Sbjct: 180 YYSTAVDIWSLGCIFAEMVTRR 201
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 93/202 (46%), Gaps = 37/202 (18%)
Query: 361 GSVY--RGKINGGFAAIKKVNGDVS---------KEIALLNKINHSNLIILSGVCFNEGN 409
G VY R K+ G A+KK+ D +EI+LL ++NH N++ L V E
Sbjct: 16 GVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENK 75
Query: 410 CYLVYEYAVNGTLSDWVFSNKNEGKYLDWKQRIQIAL--------DVATGLNYLHSFTNP 461
YLV+E F +++ K++D I L + GL + HS
Sbjct: 76 LYLVFE-----------FLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRV- 123
Query: 462 PHVHKDINSSNVLLDSDLRAKIANFAMARPAEGQEGEFALTRHIVGTKGYMAPEYLEN-G 520
+H+D+ N+L++++ K+A+F +AR + H V T Y APE L
Sbjct: 124 --LHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYT---HEVVTLWYRAPEILLGCK 178
Query: 521 LVSTKLDVYAFGVLILEMLTGK 542
ST +D+++ G + EM+T +
Sbjct: 179 YYSTAVDIWSLGCIFAEMVTRR 200
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 93/202 (46%), Gaps = 37/202 (18%)
Query: 361 GSVY--RGKINGGFAAIKKVNGDVS---------KEIALLNKINHSNLIILSGVCFNEGN 409
G VY R K+ G A+KK+ D +EI+LL ++NH N++ L V E
Sbjct: 17 GVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENK 76
Query: 410 CYLVYEYAVNGTLSDWVFSNKNEGKYLDWKQRIQIAL--------DVATGLNYLHSFTNP 461
YLV+E F +++ K++D I L + GL + HS
Sbjct: 77 LYLVFE-----------FLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRV- 124
Query: 462 PHVHKDINSSNVLLDSDLRAKIANFAMARPAEGQEGEFALTRHIVGTKGYMAPEYLEN-G 520
+H+D+ N+L++++ K+A+F +AR + H V T Y APE L
Sbjct: 125 --LHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYT---HEVVTLWYRAPEILLGCK 179
Query: 521 LVSTKLDVYAFGVLILEMLTGK 542
ST +D+++ G + EM+T +
Sbjct: 180 YYSTAVDIWSLGCIFAEMVTRR 201
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 93/202 (46%), Gaps = 37/202 (18%)
Query: 361 GSVY--RGKINGGFAAIKKVNGDVS---------KEIALLNKINHSNLIILSGVCFNEGN 409
G VY R K+ G A+KK+ D +EI+LL ++NH N++ L V E
Sbjct: 18 GVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENK 77
Query: 410 CYLVYEYAVNGTLSDWVFSNKNEGKYLDWKQRIQIAL--------DVATGLNYLHSFTNP 461
YLV+E F +++ K++D I L + GL + HS
Sbjct: 78 LYLVFE-----------FLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRV- 125
Query: 462 PHVHKDINSSNVLLDSDLRAKIANFAMARPAEGQEGEFALTRHIVGTKGYMAPEYLEN-G 520
+H+D+ N+L++++ K+A+F +AR + H V T Y APE L
Sbjct: 126 --LHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYT---HEVVTLWYRAPEILLGCK 180
Query: 521 LVSTKLDVYAFGVLILEMLTGK 542
ST +D+++ G + EM+T +
Sbjct: 181 YYSTAVDIWSLGCIFAEMVTRR 202
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 93/202 (46%), Gaps = 37/202 (18%)
Query: 361 GSVY--RGKINGGFAAIKKVNGDVS---------KEIALLNKINHSNLIILSGVCFNEGN 409
G VY R K+ G A+KK+ D +EI+LL ++NH N++ L V E
Sbjct: 24 GVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENK 83
Query: 410 CYLVYEYAVNGTLSDWVFSNKNEGKYLDWKQRIQIAL--------DVATGLNYLHSFTNP 461
YLV+E F +++ K++D I L + GL + HS
Sbjct: 84 LYLVFE-----------FLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRV- 131
Query: 462 PHVHKDINSSNVLLDSDLRAKIANFAMARPAEGQEGEFALTRHIVGTKGYMAPE-YLENG 520
+H+D+ N+L++++ K+A+F +AR + H V T Y APE L
Sbjct: 132 --LHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYT---HEVVTLWYRAPEILLGXK 186
Query: 521 LVSTKLDVYAFGVLILEMLTGK 542
ST +D+++ G + EM+T +
Sbjct: 187 YYSTAVDIWSLGCIFAEMVTRR 208
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 93/202 (46%), Gaps = 37/202 (18%)
Query: 361 GSVY--RGKINGGFAAIKKVNGDVS---------KEIALLNKINHSNLIILSGVCFNEGN 409
G VY R K+ G A+KK+ D +EI+LL ++NH N++ L V E
Sbjct: 21 GVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENK 80
Query: 410 CYLVYEYAVNGTLSDWVFSNKNEGKYLDWKQRIQIAL--------DVATGLNYLHSFTNP 461
YLV+E F +++ K++D I L + GL + HS
Sbjct: 81 LYLVFE-----------FLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRV- 128
Query: 462 PHVHKDINSSNVLLDSDLRAKIANFAMARPAEGQEGEFALTRHIVGTKGYMAPEYLEN-G 520
+H+D+ N+L++++ K+A+F +AR + H V T Y APE L
Sbjct: 129 --LHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYT---HEVVTLWYRAPEILLGCK 183
Query: 521 LVSTKLDVYAFGVLILEMLTGK 542
ST +D+++ G + EM+T +
Sbjct: 184 YYSTAVDIWSLGCIFAEMVTRR 205
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 93/202 (46%), Gaps = 37/202 (18%)
Query: 361 GSVY--RGKINGGFAAIKKVNGDVS---------KEIALLNKINHSNLIILSGVCFNEGN 409
G VY R K+ G A+KK+ D +EI+LL ++NH N++ L V E
Sbjct: 20 GVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENK 79
Query: 410 CYLVYEYAVNGTLSDWVFSNKNEGKYLDWKQRIQIAL--------DVATGLNYLHSFTNP 461
YLV+E F +++ K++D I L + GL + HS
Sbjct: 80 LYLVFE-----------FLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRV- 127
Query: 462 PHVHKDINSSNVLLDSDLRAKIANFAMARPAEGQEGEFALTRHIVGTKGYMAPEYLEN-G 520
+H+D+ N+L++++ K+A+F +AR + H V T Y APE L
Sbjct: 128 --LHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYX---HEVVTLWYRAPEILLGCK 182
Query: 521 LVSTKLDVYAFGVLILEMLTGK 542
ST +D+++ G + EM+T +
Sbjct: 183 YYSTAVDIWSLGCIFAEMVTRR 204
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 93/202 (46%), Gaps = 37/202 (18%)
Query: 361 GSVY--RGKINGGFAAIKKVNGDVS---------KEIALLNKINHSNLIILSGVCFNEGN 409
G VY R K+ G A+KK+ D +EI+LL ++NH N++ L V E
Sbjct: 19 GVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENK 78
Query: 410 CYLVYEYAVNGTLSDWVFSNKNEGKYLDWKQRIQIAL--------DVATGLNYLHSFTNP 461
YLV+E F +++ K++D I L + GL + HS
Sbjct: 79 LYLVFE-----------FLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRV- 126
Query: 462 PHVHKDINSSNVLLDSDLRAKIANFAMARPAEGQEGEFALTRHIVGTKGYMAPEYLEN-G 520
+H+D+ N+L++++ K+A+F +AR + H V T Y APE L
Sbjct: 127 --LHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYX---HEVVTLWYRAPEILLGCK 181
Query: 521 LVSTKLDVYAFGVLILEMLTGK 542
ST +D+++ G + EM+T +
Sbjct: 182 YYSTAVDIWSLGCIFAEMVTRR 203
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 93/202 (46%), Gaps = 37/202 (18%)
Query: 361 GSVY--RGKINGGFAAIKKVNGDVS---------KEIALLNKINHSNLIILSGVCFNEGN 409
G VY R K+ G A+KK+ D +EI+LL ++NH N++ L V E
Sbjct: 19 GVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENK 78
Query: 410 CYLVYEYAVNGTLSDWVFSNKNEGKYLDWKQRIQIAL--------DVATGLNYLHSFTNP 461
YLV+E F +++ K++D I L + GL + HS
Sbjct: 79 LYLVFE-----------FLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRV- 126
Query: 462 PHVHKDINSSNVLLDSDLRAKIANFAMARPAEGQEGEFALTRHIVGTKGYMAPEYLEN-G 520
+H+D+ N+L++++ K+A+F +AR + H V T Y APE L
Sbjct: 127 --LHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYX---HEVVTLWYRAPEILLGCK 181
Query: 521 LVSTKLDVYAFGVLILEMLTGK 542
ST +D+++ G + EM+T +
Sbjct: 182 YYSTAVDIWSLGCIFAEMVTRR 203
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 52/199 (26%), Positives = 91/199 (45%), Gaps = 20/199 (10%)
Query: 385 EIALLNKINHSNLIILSGVCFNEGNC--YLVYEYAVNGTLSDWVFSNKNEGKYLDWKQRI 442
E+ LL ++ H N++ + N Y+V EY G L+ + E +YLD + +
Sbjct: 55 EVNLLRELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVL 114
Query: 443 QIALDVATGLNYLHSFTNPPH--VHKDINSSNVLLDSDLRAKIANFAMARPAEGQEGEFA 500
++ + L H ++ H +H+D+ +NV LD K+ +F +AR + FA
Sbjct: 115 RVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARIL-NHDTSFA 173
Query: 501 LTRHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLILEM---------LTGKEAAALHAEE 551
+ VGT YM+PE + + K D+++ G L+ E+ + KE A E
Sbjct: 174 --KAFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQKELAGKIREG 231
Query: 552 NNMHL----SDVLNAVLTK 566
+ SD LN ++T+
Sbjct: 232 KFRRIPYRYSDELNEIITR 250
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 68.9 bits (167), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 88/176 (50%), Gaps = 17/176 (9%)
Query: 381 DVSKEIALLNKINHSNLIILSGVCFNEGNCYLVYEYAVNGTLSDWVFSN----------- 429
D +E LL + H +++ GVC + +V+EY +G L+ ++ ++
Sbjct: 63 DFQREAELLTNLQHEHIVKFYGVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQ 122
Query: 430 -KNEGKYLDWKQRIQIALDVATGLNYLHSFTNPPHVHKDINSSNVLLDSDLRAKIANFAM 488
+ L Q + IA +A+G+ YL S VH+D+ + N L+ ++L KI +F M
Sbjct: 123 PRQAKGELGLSQMLHIASQIASGMVYLAS---QHFVHRDLATRNCLVGANLLVKIGDFGM 179
Query: 489 ARPAEGQEGEFALTRHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLILEMLT-GKE 543
+R + + + H + +M PE + +T+ DV++FGV++ E+ T GK+
Sbjct: 180 SRDVYSTD-YYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVILWEIFTYGKQ 234
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 68.9 bits (167), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 93/202 (46%), Gaps = 37/202 (18%)
Query: 361 GSVY--RGKINGGFAAIKKVNGDVS---------KEIALLNKINHSNLIILSGVCFNEGN 409
G VY R K+ G A+KK+ D +EI+LL ++NH N++ L V E
Sbjct: 17 GVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENK 76
Query: 410 CYLVYEYAVNGTLSDWVFSNKNEGKYLDWKQRIQIAL--------DVATGLNYLHSFTNP 461
YLV+E F +++ K++D I L + GL + HS
Sbjct: 77 LYLVFE-----------FLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRV- 124
Query: 462 PHVHKDINSSNVLLDSDLRAKIANFAMARPAEGQEGEFALTRHIVGTKGYMAPEYLEN-G 520
+H+D+ N+L++++ K+A+F +AR + H V T Y APE L
Sbjct: 125 --LHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYX---HEVVTLWYRAPEILLGCK 179
Query: 521 LVSTKLDVYAFGVLILEMLTGK 542
ST +D+++ G + EM+T +
Sbjct: 180 YYSTAVDIWSLGCIFAEMVTRR 201
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 68.9 bits (167), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 93/202 (46%), Gaps = 37/202 (18%)
Query: 361 GSVY--RGKINGGFAAIKKVNGDVS---------KEIALLNKINHSNLIILSGVCFNEGN 409
G VY R K+ G A+KK+ D +EI+LL ++NH N++ L V E
Sbjct: 16 GVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENK 75
Query: 410 CYLVYEYAVNGTLSDWVFSNKNEGKYLDWKQRIQIAL--------DVATGLNYLHSFTNP 461
YLV+E F +++ K++D I L + GL + HS
Sbjct: 76 LYLVFE-----------FLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRV- 123
Query: 462 PHVHKDINSSNVLLDSDLRAKIANFAMARPAEGQEGEFALTRHIVGTKGYMAPEYLEN-G 520
+H+D+ N+L++++ K+A+F +AR + H V T Y APE L
Sbjct: 124 --LHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYX---HEVVTLWYRAPEILLGCK 178
Query: 521 LVSTKLDVYAFGVLILEMLTGK 542
ST +D+++ G + EM+T +
Sbjct: 179 YYSTAVDIWSLGCIFAEMVTRR 200
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 68.9 bits (167), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 93/202 (46%), Gaps = 37/202 (18%)
Query: 361 GSVY--RGKINGGFAAIKKVNGDVS---------KEIALLNKINHSNLIILSGVCFNEGN 409
G VY R K+ G A+KK+ D +EI+LL ++NH N++ L V E
Sbjct: 17 GVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENK 76
Query: 410 CYLVYEYAVNGTLSDWVFSNKNEGKYLDWKQRIQIAL--------DVATGLNYLHSFTNP 461
YLV+E F +++ K++D I L + GL + HS
Sbjct: 77 LYLVFE-----------FLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRV- 124
Query: 462 PHVHKDINSSNVLLDSDLRAKIANFAMARPAEGQEGEFALTRHIVGTKGYMAPEYLEN-G 520
+H+D+ N+L++++ K+A+F +AR + H V T Y APE L
Sbjct: 125 --LHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYX---HEVVTLWYRAPEILLGCK 179
Query: 521 LVSTKLDVYAFGVLILEMLTGK 542
ST +D+++ G + EM+T +
Sbjct: 180 YYSTAVDIWSLGCIFAEMVTRR 201
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 68.6 bits (166), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 93/202 (46%), Gaps = 37/202 (18%)
Query: 361 GSVY--RGKINGGFAAIKKVNGDVS---------KEIALLNKINHSNLIILSGVCFNEGN 409
G VY R K+ G A+KK+ D +EI+LL ++NH N++ L V E
Sbjct: 19 GVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENK 78
Query: 410 CYLVYEYAVNGTLSDWVFSNKNEGKYLDWKQRIQIAL--------DVATGLNYLHSFTNP 461
YLV+E F +++ K++D I L + GL + HS
Sbjct: 79 LYLVFE-----------FLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRV- 126
Query: 462 PHVHKDINSSNVLLDSDLRAKIANFAMARPAEGQEGEFALTRHIVGTKGYMAPEYLEN-G 520
+H+D+ N+L++++ K+A+F +AR + H V T Y APE L
Sbjct: 127 --LHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYX---HEVVTLWYRAPEILLGCK 181
Query: 521 LVSTKLDVYAFGVLILEMLTGK 542
ST +D+++ G + EM+T +
Sbjct: 182 YYSTAVDIWSLGCIFAEMVTRR 203
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 68.6 bits (166), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 93/202 (46%), Gaps = 37/202 (18%)
Query: 361 GSVY--RGKINGGFAAIKKVNGDVS---------KEIALLNKINHSNLIILSGVCFNEGN 409
G VY R K+ G A+KK+ D +EI+LL ++NH N++ L V E
Sbjct: 18 GVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENK 77
Query: 410 CYLVYEYAVNGTLSDWVFSNKNEGKYLDWKQRIQIAL--------DVATGLNYLHSFTNP 461
YLV+E F +++ K++D I L + GL + HS
Sbjct: 78 LYLVFE-----------FLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRV- 125
Query: 462 PHVHKDINSSNVLLDSDLRAKIANFAMARPAEGQEGEFALTRHIVGTKGYMAPEYLEN-G 520
+H+D+ N+L++++ K+A+F +AR + H V T Y APE L
Sbjct: 126 --LHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYX---HEVVTLWYRAPEILLGCK 180
Query: 521 LVSTKLDVYAFGVLILEMLTGK 542
ST +D+++ G + EM+T +
Sbjct: 181 YYSTAVDIWSLGCIFAEMVTRR 202
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 68.6 bits (166), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 58/248 (23%), Positives = 115/248 (46%), Gaps = 25/248 (10%)
Query: 376 KKVNGDVSKEIALLNKINHSNLIILSGVCFNEGNCYLVYEYAVNGTLSDWVFSNKNEGKY 435
+K D E +++ + +H N+I L GV +V E NG+L F K++ ++
Sbjct: 87 EKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDS--FLRKHDAQF 144
Query: 436 LDWKQRIQIALDVATGLNYLHSFTNPPHVHKDINSSNVLLDSDLRAKIANFAMARPAEGQ 495
Q + + +A+G+ YL VH+D+ + N+L++S+L K+++F ++R E
Sbjct: 145 TV-IQLVGMLRGIASGMKYLSDMGA---VHRDLAARNILINSNLVCKVSDFGLSRVLEDD 200
Query: 496 EGEFALTRHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLILEMLTGKEAAALHAEENNMH 555
TR + +PE + ++ DV+++G+++ E+++ E M
Sbjct: 201 PEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWE-----MS 255
Query: 556 LSDVLNAVLTKEDGEESLRHFIDPTLQGNYPLELALLVIRLIDACLKKDPTDRPTMYEIE 615
DV+ AV +E R + P P++ + +L+ C +KD +RP +I
Sbjct: 256 NQDVIKAV------DEGYR--LPP------PMDCPAALYQLMLDCWQKDRNNRPKFEQIV 301
Query: 616 HSLSNILN 623
L ++
Sbjct: 302 SILDKLIR 309
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 68.6 bits (166), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 93/202 (46%), Gaps = 37/202 (18%)
Query: 361 GSVY--RGKINGGFAAIKKVNGDVS---------KEIALLNKINHSNLIILSGVCFNEGN 409
G VY R K+ G A+KK+ D +EI+LL ++NH N++ L V E
Sbjct: 16 GVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENK 75
Query: 410 CYLVYEYAVNGTLSDWVFSNKNEGKYLDWKQRIQIAL--------DVATGLNYLHSFTNP 461
YLV+E F +++ K++D I L + GL + HS
Sbjct: 76 LYLVFE-----------FLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRV- 123
Query: 462 PHVHKDINSSNVLLDSDLRAKIANFAMARPAEGQEGEFALTRHIVGTKGYMAPEYLEN-G 520
+H+D+ N+L++++ K+A+F +AR + H V T Y APE L
Sbjct: 124 --LHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYX---HEVVTLWYRAPEILLGCK 178
Query: 521 LVSTKLDVYAFGVLILEMLTGK 542
ST +D+++ G + EM+T +
Sbjct: 179 YYSTAVDIWSLGCIFAEMVTRR 200
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 68.6 bits (166), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 93/202 (46%), Gaps = 37/202 (18%)
Query: 361 GSVY--RGKINGGFAAIKKVNGDVS---------KEIALLNKINHSNLIILSGVCFNEGN 409
G VY R K+ G A+KK+ D +EI+LL ++NH N++ L V E
Sbjct: 20 GVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENK 79
Query: 410 CYLVYEYAVNGTLSDWVFSNKNEGKYLDWKQRIQIAL--------DVATGLNYLHSFTNP 461
YLV+E F +++ K++D I L + GL + HS
Sbjct: 80 LYLVFE-----------FLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRV- 127
Query: 462 PHVHKDINSSNVLLDSDLRAKIANFAMARPAEGQEGEFALTRHIVGTKGYMAPEYLEN-G 520
+H+D+ N+L++++ K+A+F +AR + H V T Y APE L
Sbjct: 128 --LHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYX---HEVVTLWYRAPEILLGCK 182
Query: 521 LVSTKLDVYAFGVLILEMLTGK 542
ST +D+++ G + EM+T +
Sbjct: 183 YYSTAVDIWSLGCIFAEMVTRR 204
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 68.6 bits (166), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 52/183 (28%), Positives = 88/183 (48%), Gaps = 20/183 (10%)
Query: 369 NGGFAAIKKVNGDV--------SKEIALLNKINHSNLIILSGVCFNEG--NCYLVYEYAV 418
G A+K + D +EI +L + H ++I G C ++G + LV EY
Sbjct: 42 TGEMVAVKALKADCGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDQGEKSLQLVMEYVP 101
Query: 419 NGTLSDWVFSNKNEGKYLDWKQRIQIALDVATGLNYLHSFTNPPHVHKDINSSNVLLDSD 478
G+L D++ + + Q + A + G+ YLHS ++H+++ + NVLLD+D
Sbjct: 102 LGSLRDYLPRHS-----IGLAQLLLFAQQICEGMAYLHSQH---YIHRNLAARNVLLDND 153
Query: 479 LRAKIANFAMARPA-EGQEGEFALTRHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLILE 537
KI +F +A+ EG E + + + APE L+ DV++FGV + E
Sbjct: 154 RLVKIGDFGLAKAVPEGHE-YYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYE 212
Query: 538 MLT 540
+LT
Sbjct: 213 LLT 215
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 93/202 (46%), Gaps = 37/202 (18%)
Query: 361 GSVY--RGKINGGFAAIKKVNGDVS---------KEIALLNKINHSNLIILSGVCFNEGN 409
G VY R K+ G A+KK+ D +EI+LL ++NH N++ L V E
Sbjct: 21 GVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENK 80
Query: 410 CYLVYEYAVNGTLSDWVFSNKNEGKYLDWKQRIQIAL--------DVATGLNYLHSFTNP 461
YLV+E F +++ K++D I L + GL + HS
Sbjct: 81 LYLVFE-----------FLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRV- 128
Query: 462 PHVHKDINSSNVLLDSDLRAKIANFAMARPAEGQEGEFALTRHIVGTKGYMAPEYLEN-G 520
+H+D+ N+L++++ K+A+F +AR + H V T Y APE L
Sbjct: 129 --LHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYX---HEVVTLWYRAPEILLGCK 183
Query: 521 LVSTKLDVYAFGVLILEMLTGK 542
ST +D+++ G + EM+T +
Sbjct: 184 YYSTAVDIWSLGCIFAEMVTRR 205
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 93/202 (46%), Gaps = 37/202 (18%)
Query: 361 GSVY--RGKINGGFAAIKKVNGDVS---------KEIALLNKINHSNLIILSGVCFNEGN 409
G VY R K+ G A+KK+ D +EI+LL ++NH N++ L V E
Sbjct: 18 GVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENK 77
Query: 410 CYLVYEYAVNGTLSDWVFSNKNEGKYLDWKQRIQIAL--------DVATGLNYLHSFTNP 461
YLV+E F +++ K++D I L + GL + HS
Sbjct: 78 LYLVFE-----------FLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRV- 125
Query: 462 PHVHKDINSSNVLLDSDLRAKIANFAMARPAEGQEGEFALTRHIVGTKGYMAPEYLEN-G 520
+H+D+ N+L++++ K+A+F +AR + H V T Y APE L
Sbjct: 126 --LHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYX---HEVVTLWYRAPEILLGCK 180
Query: 521 LVSTKLDVYAFGVLILEMLTGK 542
ST +D+++ G + EM+T +
Sbjct: 181 YYSTAVDIWSLGCIFAEMVTRR 202
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 77/165 (46%), Gaps = 12/165 (7%)
Query: 378 VNGDVSKEIALLNKINHSNLIILSGVCFNEGNCYLVYEYAVNGTLSDWVFSNKNEGKYLD 437
V + +E+ + + + H N++ L G + YL+ EYA GT V+ + D
Sbjct: 56 VEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGT----VYRELQKLSKFD 111
Query: 438 WKQRIQIALDVATGLNYLHSFTNPPHVHKDINSSNVLLDSDLRAKIANFAMARPAEGQEG 497
++ ++A L+Y HS +H+DI N+LL S KIA+F + A
Sbjct: 112 EQRTATYITELANALSYCHSKRV---IHRDIKPENLLLGSAGELKIADFGWSVHAPS--- 165
Query: 498 EFALTRHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLILEMLTGK 542
+ + GT Y+ PE +E K+D+++ GVL E L GK
Sbjct: 166 --SRRTTLCGTLDYLPPEXIEGRXHDEKVDLWSLGVLCYEFLVGK 208
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 93/202 (46%), Gaps = 37/202 (18%)
Query: 361 GSVY--RGKINGGFAAIKKVNGDVS---------KEIALLNKINHSNLIILSGVCFNEGN 409
G VY R K+ G A+KK+ D +EI+LL ++NH N++ L V E
Sbjct: 18 GVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENK 77
Query: 410 CYLVYEYAVNGTLSDWVFSNKNEGKYLDWKQRIQIAL--------DVATGLNYLHSFTNP 461
YLV+E F +++ K++D I L + GL + HS
Sbjct: 78 LYLVFE-----------FLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRV- 125
Query: 462 PHVHKDINSSNVLLDSDLRAKIANFAMARPAEGQEGEFALTRHIVGTKGYMAPEYLEN-G 520
+H+D+ N+L++++ K+A+F +AR + H V T Y APE L
Sbjct: 126 --LHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYX---HEVVTLWYRAPEILLGCK 180
Query: 521 LVSTKLDVYAFGVLILEMLTGK 542
ST +D+++ G + EM+T +
Sbjct: 181 YYSTAVDIWSLGCIFAEMVTRR 202
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 93/202 (46%), Gaps = 37/202 (18%)
Query: 361 GSVY--RGKINGGFAAIKKVNGDVS---------KEIALLNKINHSNLIILSGVCFNEGN 409
G VY R K+ G A+KK+ D +EI+LL ++NH N++ L V E
Sbjct: 17 GVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENK 76
Query: 410 CYLVYEYAVNGTLSDWVFSNKNEGKYLDWKQRIQIAL--------DVATGLNYLHSFTNP 461
YLV+E F +++ K++D I L + GL + HS
Sbjct: 77 LYLVFE-----------FLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRV- 124
Query: 462 PHVHKDINSSNVLLDSDLRAKIANFAMARPAEGQEGEFALTRHIVGTKGYMAPEYLEN-G 520
+H+D+ N+L++++ K+A+F +AR + H V T Y APE L
Sbjct: 125 --LHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYX---HEVVTLWYRAPEILLGCK 179
Query: 521 LVSTKLDVYAFGVLILEMLTGK 542
ST +D+++ G + EM+T +
Sbjct: 180 YYSTAVDIWSLGCIFAEMVTRR 201
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 62/246 (25%), Positives = 114/246 (46%), Gaps = 36/246 (14%)
Query: 384 KEIALLNKINHSNLIILSGVCFNEGNCYLVYEYAVNGTLSDWVFSNKNEGKYLDWKQRIQ 443
+E+ ++++H N++ + V + YLV EY TLS+++ S+ L I
Sbjct: 60 REVHNSSQLSHQNIVSMIDVDEEDDCYYLVMEYIEGPTLSEYIESHGP----LSVDTAIN 115
Query: 444 IALDVATGLNYLHSFTNPPHVHKDINSSNVLLDSDLRAKIANFAMARPAEGQEGEFALTR 503
+ G+ + H VH+DI N+L+DS+ KI +F +A+ E T
Sbjct: 116 FTNQILDGIKHAHDMRI---VHRDIKPQNILIDSNKTLKIFDFGIAKAL--SETSLTQTN 170
Query: 504 HIVGTKGYMAPEYLENGLVSTKLDVYAFGVLILEMLTGK-----EAAALHAEENNMHLSD 558
H++GT Y +PE + D+Y+ G+++ EML G+ E A A + H+ D
Sbjct: 171 HVLGTVQYFSPEQAKGEATDECTDIYSIGIVLYEMLVGEPPFNGETAVSIAIK---HIQD 227
Query: 559 VLNAVLTKEDGEESLRHFIDPTLQGNYPLELALLVIRLIDACLKKDPTDR-PTMYEIEHS 617
+ V T ++ + P L+ +++R +KD +R T+ E++
Sbjct: 228 SVPNVTTD--------------VRKDIPQSLSNVILR----ATEKDKANRYKTIQEMKDD 269
Query: 618 LSNILN 623
LS++L+
Sbjct: 270 LSSVLH 275
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 84/171 (49%), Gaps = 14/171 (8%)
Query: 374 AIKKVNGDVSKEIALLNKINHSNLIILSGVCFNEGNCYLVYEYAVNGTLSDWVFSNKNEG 433
A++ G + EIA+L+KI H N++ L + + G+ YL+ + G L D + +G
Sbjct: 55 ALEGKEGSMENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIV---EKG 111
Query: 434 KYLDWKQRIQIALDVATGLNYLHSFTNPPHVHKDINSSNVL---LDSDLRAKIANFAMAR 490
Y + + ++ V + YLH VH+D+ N+L LD D + I++F +++
Sbjct: 112 FYTE-RDASRLIFQVLDAVKYLHDLGI---VHRDLKPENLLYYSLDEDSKIMISDFGLSK 167
Query: 491 PAEGQEGEFALTRHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLILEMLTG 541
E ++ GT GY+APE L S +D ++ GV+ +L G
Sbjct: 168 ----MEDPGSVLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCG 214
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 84/171 (49%), Gaps = 14/171 (8%)
Query: 374 AIKKVNGDVSKEIALLNKINHSNLIILSGVCFNEGNCYLVYEYAVNGTLSDWVFSNKNEG 433
A++ G + EIA+L+KI H N++ L + + G+ YL+ + G L D + +G
Sbjct: 55 ALEGKEGSMENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIV---EKG 111
Query: 434 KYLDWKQRIQIALDVATGLNYLHSFTNPPHVHKDINSSNVL---LDSDLRAKIANFAMAR 490
Y + + ++ V + YLH VH+D+ N+L LD D + I++F +++
Sbjct: 112 FYTE-RDASRLIFQVLDAVKYLHDLGI---VHRDLKPENLLYYSLDEDSKIMISDFGLSK 167
Query: 491 PAEGQEGEFALTRHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLILEMLTG 541
E ++ GT GY+APE L S +D ++ GV+ +L G
Sbjct: 168 ----MEDPGSVLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCG 214
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 93/202 (46%), Gaps = 37/202 (18%)
Query: 361 GSVY--RGKINGGFAAIKKVNGDVS---------KEIALLNKINHSNLIILSGVCFNEGN 409
G VY R K+ G A+KK+ D +EI+LL ++NH N++ L V E
Sbjct: 20 GVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENK 79
Query: 410 CYLVYEYAVNGTLSDWVFSNKNEGKYLDWKQRIQIAL--------DVATGLNYLHSFTNP 461
YLV+E+ +++ K++D I L + GL + HS
Sbjct: 80 LYLVFEHV-----------DQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRV- 127
Query: 462 PHVHKDINSSNVLLDSDLRAKIANFAMARPAEGQEGEFALTRHIVGTKGYMAPEYLEN-G 520
+H+D+ N+L++++ K+A+F +AR + H V T Y APE L
Sbjct: 128 --LHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYX---HEVVTLWYRAPEILLGCK 182
Query: 521 LVSTKLDVYAFGVLILEMLTGK 542
ST +D+++ G + EM+T +
Sbjct: 183 YYSTAVDIWSLGCIFAEMVTRR 204
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/194 (29%), Positives = 94/194 (48%), Gaps = 21/194 (10%)
Query: 361 GSVY--RGKINGGFAAIKKVNGDVS---------KEIALLNKINHSNLIILSGVCFNEGN 409
G VY R K+ G A+KK+ D +EI+LL ++NH N++ L V E
Sbjct: 16 GVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENK 75
Query: 410 CYLVYEYAVNGTLSDWVFSNKNEGKYLDWKQRIQIALDVATGLNYLHSFTNPPHVHKDIN 469
YLV+E+ V+ L ++ ++ G L + L GL + HS +H+D+
Sbjct: 76 LYLVFEH-VHQDLKTFMDASALTGIPLPLIKSYLFQL--LQGLAFCHSHRV---LHRDLK 129
Query: 470 SSNVLLDSDLRAKIANFAMARPAEGQEGEFALTRHIVGTKGYMAPEYLEN-GLVSTKLDV 528
N+L++++ K+A+F +AR + H V T Y APE L ST +D+
Sbjct: 130 PQNLLINTEGAIKLADFGLARAFGVPVRTYT---HEVVTLWYRAPEILLGCKYYSTAVDI 186
Query: 529 YAFGVLILEMLTGK 542
++ G + EM+T +
Sbjct: 187 WSLGCIFAEMVTRR 200
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 84/171 (49%), Gaps = 14/171 (8%)
Query: 374 AIKKVNGDVSKEIALLNKINHSNLIILSGVCFNEGNCYLVYEYAVNGTLSDWVFSNKNEG 433
A++ G + EIA+L+KI H N++ L + + G+ YL+ + G L D + +G
Sbjct: 55 ALEGKEGSMENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIV---EKG 111
Query: 434 KYLDWKQRIQIALDVATGLNYLHSFTNPPHVHKDINSSNVL---LDSDLRAKIANFAMAR 490
Y + + ++ V + YLH VH+D+ N+L LD D + I++F +++
Sbjct: 112 FYTE-RDASRLIFQVLDAVKYLHDLGI---VHRDLKPENLLYYSLDEDSKIMISDFGLSK 167
Query: 491 PAEGQEGEFALTRHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLILEMLTG 541
E ++ GT GY+APE L S +D ++ GV+ +L G
Sbjct: 168 ----MEDPGSVLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCG 214
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/183 (27%), Positives = 88/183 (48%), Gaps = 20/183 (10%)
Query: 369 NGGFAAIKKVNGDV--------SKEIALLNKINHSNLIILSGVCFNEG--NCYLVYEYAV 418
G A+K + D +EI +L + H ++I G C ++G + LV EY
Sbjct: 42 TGEMVAVKALKADCGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDQGEKSLQLVMEYVP 101
Query: 419 NGTLSDWVFSNKNEGKYLDWKQRIQIALDVATGLNYLHSFTNPPHVHKDINSSNVLLDSD 478
G+L D++ + + Q + A + G+ YLH+ ++H+++ + NVLLD+D
Sbjct: 102 LGSLRDYLPRHS-----IGLAQLLLFAQQICEGMAYLHAQH---YIHRNLAARNVLLDND 153
Query: 479 LRAKIANFAMARPA-EGQEGEFALTRHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLILE 537
KI +F +A+ EG E + + + APE L+ DV++FGV + E
Sbjct: 154 RLVKIGDFGLAKAVPEGHE-YYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYE 212
Query: 538 MLT 540
+LT
Sbjct: 213 LLT 215
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 92/202 (45%), Gaps = 37/202 (18%)
Query: 361 GSVY--RGKINGGFAAIKKVNGDVS---------KEIALLNKINHSNLIILSGVCFNEGN 409
G VY R K+ G A+KK+ D +EI+LL ++NH N++ L V E
Sbjct: 20 GVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENK 79
Query: 410 CYLVYEYAVNGTLSDWVFSNKNEGKYLDWKQRIQIAL--------DVATGLNYLHSFTNP 461
YLV+E F + + K++D I L + GL + HS
Sbjct: 80 LYLVFE-----------FLSMDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRV- 127
Query: 462 PHVHKDINSSNVLLDSDLRAKIANFAMARPAEGQEGEFALTRHIVGTKGYMAPEYLEN-G 520
+H+D+ N+L++++ K+A+F +AR + H V T Y APE L
Sbjct: 128 --LHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYX---HEVVTLWYRAPEILLGCK 182
Query: 521 LVSTKLDVYAFGVLILEMLTGK 542
ST +D+++ G + EM+T +
Sbjct: 183 YYSTAVDIWSLGCIFAEMVTRR 204
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/256 (23%), Positives = 109/256 (42%), Gaps = 42/256 (16%)
Query: 369 NGGFAAIKKVNGDVSK---------EIALLNKINHSNLIILSGVCFNEGNCYLVYEYAVN 419
+G A+KK+ D+ K E+ ++ H N++ + ++V E+
Sbjct: 175 SGKLVAVKKM--DLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEG 232
Query: 420 GTLSDWVFSNKNEGKYLDWKQRIQIALDVATGLNYLHSFTNPPHVHKDINSSNVLLDSDL 479
G L+D V + ++ +Q + L V L+ LH+ +H+DI S ++LL D
Sbjct: 233 GALTDIVTHTR-----MNEEQIAAVCLAVLQALSVLHAQGV---IHRDIKSDSILLTHDG 284
Query: 480 RAKIANFAMARPAEGQEGEFALTRHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLILEML 539
R K+++F E + +VGT +MAPE + ++D+++ G++++EM+
Sbjct: 285 RVKLSDFGFC---AQVSKEVPRRKXLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMV 341
Query: 540 TGKEAAALHAEENNMHL-SDVLNAVLTKEDGEESLRHFIDPTLQGNYPLELALLVIRLID 598
G+ M + D L L H + P+L+G +D
Sbjct: 342 DGEPPYFNEPPLKAMKMIRDNLPPRLKN-------LHKVSPSLKG------------FLD 382
Query: 599 ACLKKDPTDRPTMYEI 614
L +DP R T E+
Sbjct: 383 RLLVRDPAQRATAAEL 398
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 84/171 (49%), Gaps = 14/171 (8%)
Query: 374 AIKKVNGDVSKEIALLNKINHSNLIILSGVCFNEGNCYLVYEYAVNGTLSDWVFSNKNEG 433
A++ G + EIA+L+KI H N++ L + + G+ YL+ + G L D + +G
Sbjct: 55 ALEGKEGSMENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIV---EKG 111
Query: 434 KYLDWKQRIQIALDVATGLNYLHSFTNPPHVHKDINSSNVL---LDSDLRAKIANFAMAR 490
Y + + ++ V + YLH VH+D+ N+L LD D + I++F +++
Sbjct: 112 FYTE-RDASRLIFQVLDAVKYLHDLGI---VHRDLKPENLLYYSLDEDSKIMISDFGLSK 167
Query: 491 PAEGQEGEFALTRHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLILEMLTG 541
E ++ GT GY+APE L S +D ++ GV+ +L G
Sbjct: 168 ----MEDPGSVLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCG 214
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 66/285 (23%), Positives = 124/285 (43%), Gaps = 65/285 (22%)
Query: 361 GSVYRGK--INGGFAAIKKV---NGDVSKEIALLNKINHSNLIILSGVCFN--------- 406
G V++ K I+G IK+V N +E+ L K++H N++ +G C++
Sbjct: 25 GQVFKAKHRIDGKTYVIKRVKYNNEKAEREVKALAKLDHVNIVHYNG-CWDGFDYDPETS 83
Query: 407 -------EGNC-YLVYEYAVNGTLSDWVFSNKNEGKYLDWKQRIQIALDVATGLNYLHSF 458
+ C ++ E+ GTL W+ K G+ LD +++ + G++Y+HS
Sbjct: 84 SKNSSRSKTKCLFIQMEFCDKGTLEQWI--EKRRGEKLDKVLALELFEQITKGVDYIHS- 140
Query: 459 TNPPHVHKDINSSNVLLDSDLRAKIANFAMARPAEGQEGEFALTRHIVGTKGYMAPEYLE 518
+++D+ SN+ L + KI +F + + +G+ ++ GT YM+PE +
Sbjct: 141 --KKLINRDLKPSNIFLVDTKQVKIGDFGLVTSLKN-DGKRXRSK---GTLRYMSPEQIS 194
Query: 519 NGLVSTKLDVYAFGVLILEML----TGKEAAALHAEENNMHLSDVLNAVLTKEDGEESLR 574
+ ++D+YA G+++ E+L T E + + + +SD+ D +E
Sbjct: 195 SQDYGKEVDLYALGLILAELLHVCDTAFETSKFFTDLRDGIISDIF-------DKKEKT- 246
Query: 575 HFIDPTLQGNYPLELALLVIRLIDACLKKDPTDRPTMYEIEHSLS 619
L+ L K P DRP EI +L+
Sbjct: 247 ---------------------LLQKLLSKKPEDRPNTSEILRTLT 270
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 92/202 (45%), Gaps = 37/202 (18%)
Query: 361 GSVY--RGKINGGFAAIKKVNGDVS---------KEIALLNKINHSNLIILSGVCFNEGN 409
G VY R K+ G A+KK+ D +EI+LL ++NH N++ L V E
Sbjct: 18 GVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENK 77
Query: 410 CYLVYEYAVNGTLSDWVFSNKNEGKYLDWKQRIQIAL--------DVATGLNYLHSFTNP 461
YLV+E F + + K++D I L + GL + HS
Sbjct: 78 LYLVFE-----------FLSMDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRV- 125
Query: 462 PHVHKDINSSNVLLDSDLRAKIANFAMARPAEGQEGEFALTRHIVGTKGYMAPEYLEN-G 520
+H+D+ N+L++++ K+A+F +AR + H V T Y APE L
Sbjct: 126 --LHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYX---HEVVTLWYRAPEILLGCK 180
Query: 521 LVSTKLDVYAFGVLILEMLTGK 542
ST +D+++ G + EM+T +
Sbjct: 181 YYSTAVDIWSLGCIFAEMVTRR 202
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 60/262 (22%), Positives = 111/262 (42%), Gaps = 34/262 (12%)
Query: 374 AIKKVNGDVSKEIALLNKINHSNLIILSGVCFNEGNCYLVYEYAVNGTLSDWVFSNKNEG 433
A + D +E LL + H +++ GVC +V+EY +G L+ ++ S+ +
Sbjct: 82 ASESARQDFQREAELLTMLQHQHIVRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDA 141
Query: 434 KY-----------LDWKQRIQIALDVATGLNYLHSFTNPPHVHKDINSSNVLLDSDLRAK 482
K L Q + +A VA G+ YL VH+D+ + N L+ L K
Sbjct: 142 KLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAGLH---FVHRDLATRNCLVGQGLVVK 198
Query: 483 IANFAMARPAEGQEGEFALTRHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLILEMLTGK 542
I +F M+R + R ++ + +M PE + +T+ DV++FGV++ E+ T
Sbjct: 199 IGDFGMSRDIYSTDYYRVGGRTMLPIR-WMPPESILYRKFTTESDVWSFGVVLWEIFT-- 255
Query: 543 EAAALHAEENNMHLSDVLNAVLTKEDGEESLRHFIDPTLQGNYPLELALLVIRLIDACLK 602
+ ++ LS+ A+ G E R P V ++ C +
Sbjct: 256 -----YGKQPWYQLSNT-EAIDCITQGRELER-----------PRACPPEVYAIMRGCWQ 298
Query: 603 KDPTDRPTMYEIEHSLSNILNA 624
++P R ++ ++ L + A
Sbjct: 299 REPQQRHSIKDVHARLQALAQA 320
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 57/257 (22%), Positives = 111/257 (43%), Gaps = 44/257 (17%)
Query: 369 NGGFAAIKKVNGDVSK---------EIALLNKINHSNLIILSGVCFNEGNCYLVYEYAVN 419
+G A+KK+ D+ K E+ ++ H N++ + ++V E+
Sbjct: 55 SGKLVAVKKM--DLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEG 112
Query: 420 GTLSDWVFSNKNEGKYLDWKQRIQIALDVATGLNYLHSFTNPPHVHKDINSSNVLLDSDL 479
G L+D V + ++ +Q + L V L+ LH+ +H+DI S ++LL D
Sbjct: 113 GALTDIVTHTR-----MNEEQIAAVCLAVLQALSVLHAQGV---IHRDIKSDSILLTHDG 164
Query: 480 RAKIANFAMARPAEGQEGEFALTRHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLILEML 539
R K+++F E + +VGT +MAPE + ++D+++ G++++EM+
Sbjct: 165 RVKLSDFGFCAQVSK---EVPRRKXLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMV 221
Query: 540 TGKEAAALHAEENNMHLSDVLNAVLTKEDGEESLR--HFIDPTLQGNYPLELALLVIRLI 597
G+ M + +++ L+ H + P+L+G +
Sbjct: 222 DGEPPYFNEPPLKAMK--------MIRDNLPPRLKNLHKVSPSLKG------------FL 261
Query: 598 DACLKKDPTDRPTMYEI 614
D L +DP R T E+
Sbjct: 262 DRLLVRDPAQRATAAEL 278
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 57/257 (22%), Positives = 112/257 (43%), Gaps = 44/257 (17%)
Query: 369 NGGFAAIKKVNGDVSK---------EIALLNKINHSNLIILSGVCFNEGNCYLVYEYAVN 419
+G A+KK+ D+ K E+ ++ H N++ + ++V E+
Sbjct: 98 SGKLVAVKKM--DLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEG 155
Query: 420 GTLSDWVFSNKNEGKYLDWKQRIQIALDVATGLNYLHSFTNPPHVHKDINSSNVLLDSDL 479
G L+D V + ++ +Q + L V L+ LH+ +H+DI S ++LL D
Sbjct: 156 GALTDIVTHTR-----MNEEQIAAVCLAVLQALSVLHAQGV---IHRDIKSDSILLTHDG 207
Query: 480 RAKIANFAMARPAEGQEGEFALTRHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLILEML 539
R K+++F E + +VGT +MAPE + ++D+++ G++++EM+
Sbjct: 208 RVKLSDFGFCAQVSK---EVPRRKXLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMV 264
Query: 540 TGKEAAALHAEENNMHLSDVLNAVLTKEDGEESLR--HFIDPTLQGNYPLELALLVIRLI 597
G E + + + +++ L+ H + P+L+G +
Sbjct: 265 DG--------EPPYFNEPPLKAMKMIRDNLPPRLKNLHKVSPSLKG------------FL 304
Query: 598 DACLKKDPTDRPTMYEI 614
D L +DP R T E+
Sbjct: 305 DRLLVRDPAQRATAAEL 321
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 57/257 (22%), Positives = 111/257 (43%), Gaps = 44/257 (17%)
Query: 369 NGGFAAIKKVNGDVSK---------EIALLNKINHSNLIILSGVCFNEGNCYLVYEYAVN 419
+G A+KK+ D+ K E+ ++ H N++ + ++V E+
Sbjct: 53 SGKLVAVKKM--DLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEG 110
Query: 420 GTLSDWVFSNKNEGKYLDWKQRIQIALDVATGLNYLHSFTNPPHVHKDINSSNVLLDSDL 479
G L+D V + ++ +Q + L V L+ LH+ +H+DI S ++LL D
Sbjct: 111 GALTDIVTHTR-----MNEEQIAAVCLAVLQALSVLHAQGV---IHRDIKSDSILLTHDG 162
Query: 480 RAKIANFAMARPAEGQEGEFALTRHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLILEML 539
R K+++F E + +VGT +MAPE + ++D+++ G++++EM+
Sbjct: 163 RVKLSDFGFCAQVSK---EVPRRKXLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMV 219
Query: 540 TGKEAAALHAEENNMHLSDVLNAVLTKEDGEESLR--HFIDPTLQGNYPLELALLVIRLI 597
G+ M + +++ L+ H + P+L+G +
Sbjct: 220 DGEPPYFNEPPLKAMK--------MIRDNLPPRLKNLHKVSPSLKG------------FL 259
Query: 598 DACLKKDPTDRPTMYEI 614
D L +DP R T E+
Sbjct: 260 DRLLVRDPAQRATAAEL 276
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 47/173 (27%), Positives = 83/173 (47%), Gaps = 14/173 (8%)
Query: 381 DVSKEIALLNKINHSNLIILSGVCFNEGNCYLVYEYAVNGTLSDW---------VFSNKN 431
D +E LL + H +++ GVC +V+EY +G L+ + + + N
Sbjct: 61 DFHREAELLTNLQHEHIVKFYGVCVEGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGN 120
Query: 432 EGKYLDWKQRIQIALDVATGLNYLHSFTNPPHVHKDINSSNVLLDSDLRAKIANFAMARP 491
L Q + IA +A G+ YL S VH+D+ + N L+ +L KI +F M+R
Sbjct: 121 PPTELTQSQMLHIAQQIAAGMVYLAS---QHFVHRDLATRNCLVGENLLVKIGDFGMSRD 177
Query: 492 AEGQEGEFALTRHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLILEMLT-GKE 543
+ + + H + +M PE + +T+ DV++ GV++ E+ T GK+
Sbjct: 178 VYSTD-YYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQ 229
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 94/187 (50%), Gaps = 15/187 (8%)
Query: 361 GSVYRGKINGGF-AAIKKVN-GDVSK-----EIALLNKINHSNLIILSGVCFNEGNCYLV 413
G V GK G + AIK + G +S+ E ++ ++H L+ L GVC + +++
Sbjct: 23 GVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFII 82
Query: 414 YEYAVNGTLSDWVFSNKNEGKYLDWKQRIQIALDVATGLNYLHSFTNPPHVHKDINSSNV 473
EY NG L +++ ++ + +Q +++ DV + YL S +H+D+ + N
Sbjct: 83 TEYMANGCLLNYLREMRHRFQT---QQLLEMCKDVCEAMEYLES---KQFLHRDLAARNC 136
Query: 474 LLDSDLRAKIANFAMARPAEGQEGEFALTRHIVGTKGYMAPEYLENGLVSTKLDVYAFGV 533
L++ K+++F ++R + E+ +R + PE L S+K D++AFGV
Sbjct: 137 LVNDQGVVKVSDFGLSRYV--LDDEYTSSRGSKFPVRWSPPEVLMYSKFSSKSDIWAFGV 194
Query: 534 LILEMLT 540
L+ E+ +
Sbjct: 195 LMWEIYS 201
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 85/165 (51%), Gaps = 12/165 (7%)
Query: 378 VNGDVSKEIALLNKINHSNLIILSGVCFNEGNCYLVYEYAVNGTLSDWVFSNKNEGKYLD 437
V G + +EI L H ++I L V + ++V EY G L D++ + G+ +
Sbjct: 54 VVGKIKREIQNLKLFRHPHIIKLYQVISTPTDFFMVMEYVSGGELFDYICKH---GRVEE 110
Query: 438 WKQRIQIALDVATGLNYLHSFTNPPHVHKDINSSNVLLDSDLRAKIANFAMARPAEGQEG 497
+ R ++ + + ++Y H VH+D+ NVLLD+ + AKIA+F ++ +G
Sbjct: 111 MEAR-RLFQQILSAVDYCHRHMV---VHRDLKPENVLLDAHMNAKIADFGLSNMM--SDG 164
Query: 498 EFALTRHIVGTKGYMAPEYLENGLVS-TKLDVYAFGVLILEMLTG 541
EF T G+ Y APE + L + ++D+++ GV++ +L G
Sbjct: 165 EFLRTS--CGSPNYAAPEVISGRLYAGPEVDIWSCGVILYALLCG 207
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 92/202 (45%), Gaps = 37/202 (18%)
Query: 361 GSVY--RGKINGGFAAIKKVNGDVS---------KEIALLNKINHSNLIILSGVCFNEGN 409
G VY R K+ G A+ K+ D +EI+LL ++NH N++ L V E
Sbjct: 17 GVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENK 76
Query: 410 CYLVYEYAVNGTLSDWVFSNKNEGKYLDWKQRIQIAL--------DVATGLNYLHSFTNP 461
YLV+E F +++ K++D I L + GL + HS
Sbjct: 77 LYLVFE-----------FLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRV- 124
Query: 462 PHVHKDINSSNVLLDSDLRAKIANFAMARPAEGQEGEFALTRHIVGTKGYMAPEYLEN-G 520
+H+D+ N+L++++ K+A+F +AR + H V T Y APE L
Sbjct: 125 --LHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYT---HEVVTLWYRAPEILLGCK 179
Query: 521 LVSTKLDVYAFGVLILEMLTGK 542
ST +D+++ G + EM+T +
Sbjct: 180 YYSTAVDIWSLGCIFAEMVTRR 201
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 92/202 (45%), Gaps = 37/202 (18%)
Query: 361 GSVY--RGKINGGFAAIKKVNGDVS---------KEIALLNKINHSNLIILSGVCFNEGN 409
G VY R K+ G A+ K+ D +EI+LL ++NH N++ L V E
Sbjct: 16 GVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENK 75
Query: 410 CYLVYEYAVNGTLSDWVFSNKNEGKYLDWKQRIQIAL--------DVATGLNYLHSFTNP 461
YLV+E F +++ K++D I L + GL + HS
Sbjct: 76 LYLVFE-----------FLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRV- 123
Query: 462 PHVHKDINSSNVLLDSDLRAKIANFAMARPAEGQEGEFALTRHIVGTKGYMAPEYLEN-G 520
+H+D+ N+L++++ K+A+F +AR + H V T Y APE L
Sbjct: 124 --LHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYT---HEVVTLWYRAPEILLGCK 178
Query: 521 LVSTKLDVYAFGVLILEMLTGK 542
ST +D+++ G + EM+T +
Sbjct: 179 YYSTAVDIWSLGCIFAEMVTRR 200
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 85/165 (51%), Gaps = 12/165 (7%)
Query: 378 VNGDVSKEIALLNKINHSNLIILSGVCFNEGNCYLVYEYAVNGTLSDWVFSNKNEGKYLD 437
V G + +EI L H ++I L V + ++V EY G L D++ + G+ +
Sbjct: 54 VVGKIKREIQNLKLFRHPHIIKLYQVISTPTDFFMVMEYVSGGELFDYICKH---GRVEE 110
Query: 438 WKQRIQIALDVATGLNYLHSFTNPPHVHKDINSSNVLLDSDLRAKIANFAMARPAEGQEG 497
+ R ++ + + ++Y H VH+D+ NVLLD+ + AKIA+F ++ +G
Sbjct: 111 MEAR-RLFQQILSAVDYCHRHMV---VHRDLKPENVLLDAHMNAKIADFGLSNMM--SDG 164
Query: 498 EFALTRHIVGTKGYMAPEYLENGLVS-TKLDVYAFGVLILEMLTG 541
EF R G+ Y APE + L + ++D+++ GV++ +L G
Sbjct: 165 EF--LRDSCGSPNYAAPEVISGRLYAGPEVDIWSCGVILYALLCG 207
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 56/194 (28%), Positives = 94/194 (48%), Gaps = 21/194 (10%)
Query: 361 GSVY--RGKINGGFAAIKKVNGDVS---------KEIALLNKINHSNLIILSGVCFNEGN 409
G VY R K+ G A+KK+ D +EI+LL ++NH N++ L V E
Sbjct: 20 GVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENK 79
Query: 410 CYLVYEYAVNGTLSDWVFSNKNEGKYLDWKQRIQIALDVATGLNYLHSFTNPPHVHKDIN 469
YLV+E+ ++ L ++ ++ G L + L GL + HS +H+D+
Sbjct: 80 LYLVFEF-LHQDLKTFMDASALTGIPLPLIKSYLFQL--LQGLAFCHSHRV---LHRDLK 133
Query: 470 SSNVLLDSDLRAKIANFAMARPAEGQEGEFALTRHIVGTKGYMAPEYLEN-GLVSTKLDV 528
N+L++++ K+A+F +AR + H V T Y APE L ST +D+
Sbjct: 134 PQNLLINTEGAIKLADFGLARAFGVPVRTYX---HEVVTLWYRAPEILLGCKYYSTAVDI 190
Query: 529 YAFGVLILEMLTGK 542
++ G + EM+T +
Sbjct: 191 WSLGCIFAEMVTRR 204
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 57/257 (22%), Positives = 111/257 (43%), Gaps = 44/257 (17%)
Query: 369 NGGFAAIKKVNGDVSK---------EIALLNKINHSNLIILSGVCFNEGNCYLVYEYAVN 419
+G A+KK+ D+ K E+ ++ H N++ + ++V E+
Sbjct: 48 SGKLVAVKKM--DLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEG 105
Query: 420 GTLSDWVFSNKNEGKYLDWKQRIQIALDVATGLNYLHSFTNPPHVHKDINSSNVLLDSDL 479
G L+D V + ++ +Q + L V L+ LH+ +H+DI S ++LL D
Sbjct: 106 GALTDIVTHTR-----MNEEQIAAVCLAVLQALSVLHAQGV---IHRDIKSDSILLTHDG 157
Query: 480 RAKIANFAMARPAEGQEGEFALTRHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLILEML 539
R K+++F E + +VGT +MAPE + ++D+++ G++++EM+
Sbjct: 158 RVKLSDFGFCAQVSK---EVPRRKXLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMV 214
Query: 540 TGKEAAALHAEENNMHLSDVLNAVLTKEDGEESLR--HFIDPTLQGNYPLELALLVIRLI 597
G+ M + +++ L+ H + P+L+G +
Sbjct: 215 DGEPPYFNEPPLKAMK--------MIRDNLPPRLKNLHKVSPSLKG------------FL 254
Query: 598 DACLKKDPTDRPTMYEI 614
D L +DP R T E+
Sbjct: 255 DRLLVRDPAQRATAAEL 271
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 57/257 (22%), Positives = 111/257 (43%), Gaps = 44/257 (17%)
Query: 369 NGGFAAIKKVNGDVSK---------EIALLNKINHSNLIILSGVCFNEGNCYLVYEYAVN 419
+G A+KK+ D+ K E+ ++ H N++ + ++V E+
Sbjct: 44 SGKLVAVKKM--DLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEG 101
Query: 420 GTLSDWVFSNKNEGKYLDWKQRIQIALDVATGLNYLHSFTNPPHVHKDINSSNVLLDSDL 479
G L+D V + ++ +Q + L V L+ LH+ +H+DI S ++LL D
Sbjct: 102 GALTDIVTHTR-----MNEEQIAAVCLAVLQALSVLHAQGV---IHRDIKSDSILLTHDG 153
Query: 480 RAKIANFAMARPAEGQEGEFALTRHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLILEML 539
R K+++F E + +VGT +MAPE + ++D+++ G++++EM+
Sbjct: 154 RVKLSDFGFCAQVSK---EVPRRKXLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMV 210
Query: 540 TGKEAAALHAEENNMHLSDVLNAVLTKEDGEESLR--HFIDPTLQGNYPLELALLVIRLI 597
G+ M + +++ L+ H + P+L+G +
Sbjct: 211 DGEPPYFNEPPLKAMK--------MIRDNLPPRLKNLHKVSPSLKG------------FL 250
Query: 598 DACLKKDPTDRPTMYEI 614
D L +DP R T E+
Sbjct: 251 DRLLVRDPAQRATAAEL 267
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 60/262 (22%), Positives = 111/262 (42%), Gaps = 34/262 (12%)
Query: 374 AIKKVNGDVSKEIALLNKINHSNLIILSGVCFNEGNCYLVYEYAVNGTLSDWVFSNKNEG 433
A + D +E LL + H +++ GVC +V+EY +G L+ ++ S+ +
Sbjct: 53 ASESARQDFQREAELLTMLQHQHIVRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDA 112
Query: 434 KY-----------LDWKQRIQIALDVATGLNYLHSFTNPPHVHKDINSSNVLLDSDLRAK 482
K L Q + +A VA G+ YL VH+D+ + N L+ L K
Sbjct: 113 KLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAGLH---FVHRDLATRNCLVGQGLVVK 169
Query: 483 IANFAMARPAEGQEGEFALTRHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLILEMLTGK 542
I +F M+R + R ++ + +M PE + +T+ DV++FGV++ E+ T
Sbjct: 170 IGDFGMSRDIYSTDYYRVGGRTMLPIR-WMPPESILYRKFTTESDVWSFGVVLWEIFT-- 226
Query: 543 EAAALHAEENNMHLSDVLNAVLTKEDGEESLRHFIDPTLQGNYPLELALLVIRLIDACLK 602
+ ++ LS+ A+ G E R P V ++ C +
Sbjct: 227 -----YGKQPWYQLSNT-EAIDCITQGRELER-----------PRACPPEVYAIMRGCWQ 269
Query: 603 KDPTDRPTMYEIEHSLSNILNA 624
++P R ++ ++ L + A
Sbjct: 270 REPQQRHSIKDVHARLQALAQA 291
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 69/275 (25%), Positives = 121/275 (44%), Gaps = 53/275 (19%)
Query: 374 AIKKVNGDVS--------KEIALLNKINHSNLIILSGVCFNEGNCYLVYEYAVNGTLSDW 425
A+K VN S E +++ +++ L GV +V E +G L +
Sbjct: 51 AVKTVNESASLRERIEFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSY 110
Query: 426 VFSNKNEGKY------LDWKQRIQIALDVATGLNYLHSFTNPPHVHKDINSSNVLLDSDL 479
+ S + E + ++ IQ+A ++A G+ YL++ VH+D+ + N ++ D
Sbjct: 111 LRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNA---KKFVHRDLAARNCMVAHDF 167
Query: 480 RAKIANFAMARPAEGQEGEFALTRHIVGTKG-----YMAPEYLENGLVSTKLDVYAFGVL 534
KI +F M R + + G KG +MAPE L++G+ +T D+++FGV+
Sbjct: 168 TVKIGDFGMTRDI------YETAYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVV 221
Query: 535 ILEMLTGKEAAALHAEENNMHLSDVLNAVLTKEDGEESLRHFIDPTLQGNY---PLELAL 591
+ E+ + AE+ LS+ E+ L+ +D G Y P
Sbjct: 222 LWEITS-------LAEQPYQGLSN-----------EQVLKFVMD----GGYLDQPDNCPE 259
Query: 592 LVIRLIDACLKKDPTDRPTMYEIEHSLSNILNASL 626
V L+ C + +P RPT EI + L + L+ S
Sbjct: 260 RVTDLMRMCWQFNPKMRPTFLEIVNLLKDDLHPSF 294
>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|3F5P|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|E Chain E, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|F Chain F, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|G Chain G, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|H Chain H, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|I Chain I, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|J Chain J, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|K Chain K, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|M Chain M, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|L Chain L, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|R Chain R, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|S Chain S, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|T Chain T, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
Length = 308
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 74/306 (24%), Positives = 134/306 (43%), Gaps = 48/306 (15%)
Query: 340 VYSFKELQSATDNFSFTCRI-QGS---VYRGKINGGF-------AAIKKVNGDVS----- 383
VY E + A + + + + QGS VY G G AIK VN S
Sbjct: 8 VYVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERI 67
Query: 384 ---KEIALLNKINHSNLIILSGVCFNEGNCYLVYEYAVNGTLSDWVFSNKNEGKY----- 435
E +++ + N +++ L GV ++ E G L ++ S + E +
Sbjct: 68 EFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLA 127
Query: 436 -LDWKQRIQIALDVATGLNYLHSFTNPPHVHKDINSSNVLLDSDLRAKIANFAMARPAEG 494
+ IQ+A ++A G+ YL++ VH+D+ + N ++ D KI +F M R
Sbjct: 128 PPSLSKMIQMAGEIADGMAYLNANK---FVHRDLAARNCMVAEDFTVKIGDFGMTRDIXE 184
Query: 495 QEGEFALTRHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLILEMLTGKEAAALHAEENNM 554
+ + ++ + +M+PE L++G+ +T DV++FGV++ E+ T AE+
Sbjct: 185 TDXXRKGGKGLLPVR-WMSPESLKDGVFTTYSDVWSFGVVLWEIAT-------LAEQPYQ 236
Query: 555 HLSDVLNAVLTKEDGEESLRHFIDPTLQGNYPLELALLVIRLIDACLKKDPTDRPTMYEI 614
LS+ E+ LR ++ L + P ++ L+ C + +P RP+ EI
Sbjct: 237 GLSN-----------EQVLRFVMEGGLL-DKPDNCPDMLFELMRMCWQYNPKMRPSFLEI 284
Query: 615 EHSLSN 620
S+
Sbjct: 285 ISSIKE 290
>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
Length = 322
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 77/311 (24%), Positives = 134/311 (43%), Gaps = 58/311 (18%)
Query: 340 VYSFKELQSATDNFSFTCRI-QGS---VYRGKINGGF-------AAIKKVNGDVS----- 383
VY E + A + + + + QGS VY G G AIK VN S
Sbjct: 14 VYVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERI 73
Query: 384 ---KEIALLNKINHSNLIILSGVCFNEGNCYLVYEYAVNGTLSDWVFSNKNEGKY----- 435
E +++ + N +++ L GV ++ E G L ++ S + E +
Sbjct: 74 EFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLA 133
Query: 436 -LDWKQRIQIALDVATGLNYLHSFTNPPHVHKDINSSNVLLDSDLRAKIANFAMARPAEG 494
+ IQ+A ++A G+ YL++ VH+D+ + N ++ D KI +F M R
Sbjct: 134 PPSLSKMIQMAGEIADGMAYLNANK---FVHRDLAARNCMVAEDFTVKIGDFGMTRDI-- 188
Query: 495 QEGEFALTRHIVGTKG-----YMAPEYLENGLVSTKLDVYAFGVLILEMLTGKEAAALHA 549
+ + G KG +M+PE L++G+ +T DV++FGV++ E+ T A
Sbjct: 189 ----YETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT-------LA 237
Query: 550 EENNMHLSDVLNAVLTKEDGEESLRHFIDPTLQGNYPLELALLVIRLIDACLKKDPTDRP 609
E+ LS+ E+ LR ++ L + P ++ L+ C + +P RP
Sbjct: 238 EQPYQGLSN-----------EQVLRFVMEGGLL-DKPDNCPDMLFELMRMCWQYNPKMRP 285
Query: 610 TMYEIEHSLSN 620
+ EI S+
Sbjct: 286 SFLEIISSIKE 296
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 51/190 (26%), Positives = 95/190 (50%), Gaps = 21/190 (11%)
Query: 361 GSVYRGKINGGF-AAIKKVN-GDVSK-----EIALLNKINHSNLIILSGVCFNEGNCYLV 413
G V GK G + AIK + G +S+ E ++ ++H L+ L GVC + +++
Sbjct: 18 GVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFII 77
Query: 414 YEYAVNGTLSDWVFSNKNEGKYLDWKQRIQIALDVATGLNYLHSFTNPPHVHKDINSSNV 473
EY NG L +++ ++ + +Q +++ DV + YL S +H+D+ + N
Sbjct: 78 TEYMANGCLLNYLREMRHRFQT---QQLLEMCKDVCEAMEYLES---KQFLHRDLAARNC 131
Query: 474 LLDSDLRAKIANFAMARPAEGQEGEFALTRHIVGTK---GYMAPEYLENGLVSTKLDVYA 530
L++ K+++F ++R E + VG+K + PE L S+K D++A
Sbjct: 132 LVNDQGVVKVSDFGLSRYVLDDEYTSS-----VGSKFPVRWSPPEVLMYSKFSSKSDIWA 186
Query: 531 FGVLILEMLT 540
FGVL+ E+ +
Sbjct: 187 FGVLMWEIYS 196
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 61/231 (26%), Positives = 103/231 (44%), Gaps = 27/231 (11%)
Query: 381 DVSKEIALLNKINHSNLIILSGVCFNEGNCYLVYEYAVNGTLSDWVFSNKNEGKYLDWKQ 440
D +E+ ++ ++H NLI L GV +V E A G+L D + K++G +L
Sbjct: 61 DFIREVNAMHSLDHRNLIRLYGVVLTP-PMKMVTELAPLGSLLDRL--RKHQGHFL-LGT 116
Query: 441 RIQIALDVATGLNYLHSFTNPPHVHKDINSSNVLLDSDLRAKIANFAMARPAEGQEGEFA 500
+ A+ VA G+ YL S +H+D+ + N+LL + KI +F + R + +
Sbjct: 117 LSRYAVQVAEGMGYLESKR---FIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYV 173
Query: 501 LTRHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLILEMLT-GKEAAALHAEENNMHLSDV 559
+ H + APE L+ S D + FGV + EM T G+E ++ S +
Sbjct: 174 MQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWI------GLNGSQI 227
Query: 560 LNAVLTKEDGEESLRHFIDPTLQGNYPLELALLVIRLIDACLKKDPTDRPT 610
L+ + ++GE R P + + ++ C P DRPT
Sbjct: 228 LHKI--DKEGERLPR-----------PEDCPQDIYNVMVQCWAHKPEDRPT 265
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 77/311 (24%), Positives = 134/311 (43%), Gaps = 58/311 (18%)
Query: 340 VYSFKELQSATDNFSFTCRI-QGS---VYRGKINGGF-------AAIKKVNGDVS----- 383
VY E + A + + + + QGS VY G G AIK VN S
Sbjct: 8 VYVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERI 67
Query: 384 ---KEIALLNKINHSNLIILSGVCFNEGNCYLVYEYAVNGTLSDWVFSNKNEGKY----- 435
E +++ + N +++ L GV ++ E G L ++ S + E +
Sbjct: 68 EFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLA 127
Query: 436 -LDWKQRIQIALDVATGLNYLHSFTNPPHVHKDINSSNVLLDSDLRAKIANFAMARPAEG 494
+ IQ+A ++A G+ YL++ VH+D+ + N ++ D KI +F M R
Sbjct: 128 PPSLSKMIQMAGEIADGMAYLNANK---FVHRDLAARNCMVAEDFTVKIGDFGMTRDI-- 182
Query: 495 QEGEFALTRHIVGTKG-----YMAPEYLENGLVSTKLDVYAFGVLILEMLTGKEAAALHA 549
+ + G KG +M+PE L++G+ +T DV++FGV++ E+ T A
Sbjct: 183 ----YETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT-------LA 231
Query: 550 EENNMHLSDVLNAVLTKEDGEESLRHFIDPTLQGNYPLELALLVIRLIDACLKKDPTDRP 609
E+ LS+ E+ LR ++ L + P ++ L+ C + +P RP
Sbjct: 232 EQPYQGLSN-----------EQVLRFVMEGGLL-DKPDNCPDMLFELMRMCWQYNPKMRP 279
Query: 610 TMYEIEHSLSN 620
+ EI S+
Sbjct: 280 SFLEIISSIKE 290
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 61/231 (26%), Positives = 103/231 (44%), Gaps = 27/231 (11%)
Query: 381 DVSKEIALLNKINHSNLIILSGVCFNEGNCYLVYEYAVNGTLSDWVFSNKNEGKYLDWKQ 440
D +E+ ++ ++H NLI L GV +V E A G+L D + K++G +L
Sbjct: 67 DFIREVNAMHSLDHRNLIRLYGVVLTP-PMKMVTELAPLGSLLDRL--RKHQGHFL-LGT 122
Query: 441 RIQIALDVATGLNYLHSFTNPPHVHKDINSSNVLLDSDLRAKIANFAMARPAEGQEGEFA 500
+ A+ VA G+ YL S +H+D+ + N+LL + KI +F + R + +
Sbjct: 123 LSRYAVQVAEGMGYLESKR---FIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYV 179
Query: 501 LTRHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLILEMLT-GKEAAALHAEENNMHLSDV 559
+ H + APE L+ S D + FGV + EM T G+E ++ S +
Sbjct: 180 MQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWI------GLNGSQI 233
Query: 560 LNAVLTKEDGEESLRHFIDPTLQGNYPLELALLVIRLIDACLKKDPTDRPT 610
L+ + ++GE R P + + ++ C P DRPT
Sbjct: 234 LHKI--DKEGERLPR-----------PEDCPQDIYNVMVQCWAHKPEDRPT 271
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 51/190 (26%), Positives = 95/190 (50%), Gaps = 21/190 (11%)
Query: 361 GSVYRGKINGGF-AAIKKVN-GDVSK-----EIALLNKINHSNLIILSGVCFNEGNCYLV 413
G V GK G + AIK + G +S+ E ++ ++H L+ L GVC + +++
Sbjct: 22 GVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFII 81
Query: 414 YEYAVNGTLSDWVFSNKNEGKYLDWKQRIQIALDVATGLNYLHSFTNPPHVHKDINSSNV 473
EY NG L +++ ++ + +Q +++ DV + YL S +H+D+ + N
Sbjct: 82 TEYMANGCLLNYLREMRHRFQT---QQLLEMCKDVCEAMEYLES---KQFLHRDLAARNC 135
Query: 474 LLDSDLRAKIANFAMARPAEGQEGEFALTRHIVGTK---GYMAPEYLENGLVSTKLDVYA 530
L++ K+++F ++R E + VG+K + PE L S+K D++A
Sbjct: 136 LVNDQGVVKVSDFGLSRYVLDDEYTSS-----VGSKFPVRWSPPEVLMYSKFSSKSDIWA 190
Query: 531 FGVLILEMLT 540
FGVL+ E+ +
Sbjct: 191 FGVLMWEIYS 200
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 51/190 (26%), Positives = 94/190 (49%), Gaps = 21/190 (11%)
Query: 361 GSVYRGKINGGF-AAIKKVN-GDVSK-----EIALLNKINHSNLIILSGVCFNEGNCYLV 413
G V GK G + AIK + G +S+ E ++ ++H L+ L GVC + +++
Sbjct: 38 GVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFII 97
Query: 414 YEYAVNGTLSDWVFSNKNEGKYLDWKQRIQIALDVATGLNYLHSFTNPPHVHKDINSSNV 473
EY NG L +++ ++ +Q +++ DV + YL S +H+D+ + N
Sbjct: 98 TEYMANGCLLNYLREMRHR---FQTQQLLEMCKDVCEAMEYLES---KQFLHRDLAARNC 151
Query: 474 LLDSDLRAKIANFAMARPAEGQEGEFALTRHIVGTK---GYMAPEYLENGLVSTKLDVYA 530
L++ K+++F ++R E + VG+K + PE L S+K D++A
Sbjct: 152 LVNDQGVVKVSDFGLSRYVLDDEETSS-----VGSKFPVRWSPPEVLMYSKFSSKSDIWA 206
Query: 531 FGVLILEMLT 540
FGVL+ E+ +
Sbjct: 207 FGVLMWEIYS 216
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 69/275 (25%), Positives = 121/275 (44%), Gaps = 53/275 (19%)
Query: 374 AIKKVNGDVS--------KEIALLNKINHSNLIILSGVCFNEGNCYLVYEYAVNGTLSDW 425
A+K VN S E +++ +++ L GV +V E +G L +
Sbjct: 51 AVKTVNESASLRERIEFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSY 110
Query: 426 VFSNKNEGKY------LDWKQRIQIALDVATGLNYLHSFTNPPHVHKDINSSNVLLDSDL 479
+ S + E + ++ IQ+A ++A G+ YL++ VH+D+ + N ++ D
Sbjct: 111 LRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNA---KKFVHRDLAARNCMVAHDF 167
Query: 480 RAKIANFAMARPAEGQEGEFALTRHIVGTKG-----YMAPEYLENGLVSTKLDVYAFGVL 534
KI +F M R + + G KG +MAPE L++G+ +T D+++FGV+
Sbjct: 168 TVKIGDFGMTRDI------YETDYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVV 221
Query: 535 ILEMLTGKEAAALHAEENNMHLSDVLNAVLTKEDGEESLRHFIDPTLQGNY---PLELAL 591
+ E+ + AE+ LS+ E+ L+ +D G Y P
Sbjct: 222 LWEITS-------LAEQPYQGLSN-----------EQVLKFVMD----GGYLDQPDNCPE 259
Query: 592 LVIRLIDACLKKDPTDRPTMYEIEHSLSNILNASL 626
V L+ C + +P RPT EI + L + L+ S
Sbjct: 260 RVTDLMRMCWQFNPKMRPTFLEIVNLLKDDLHPSF 294
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 66/270 (24%), Positives = 121/270 (44%), Gaps = 43/270 (15%)
Query: 374 AIKKVNGDVS--------KEIALLNKINHSNLIILSGVCFNEGNCYLVYEYAVNGTLSDW 425
A+K VN S E +++ +++ L GV +V E +G L +
Sbjct: 51 AVKTVNESASLRERIEFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSY 110
Query: 426 VFSNKNEGKY------LDWKQRIQIALDVATGLNYLHSFTNPPHVHKDINSSNVLLDSDL 479
+ S + E + ++ IQ+A ++A G+ YL++ VH+D+ + N ++ D
Sbjct: 111 LRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNA---KKFVHRDLAARNCMVAHDF 167
Query: 480 RAKIANFAMARPAEGQEGEFALTRHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLILEML 539
KI +F M R + + ++ + +MAPE L++G+ +T D+++FGV++ E+
Sbjct: 168 TVKIGDFGMTRDIXETDXXRKGGKGLLPVR-WMAPESLKDGVFTTSSDMWSFGVVLWEIT 226
Query: 540 TGKEAAALHAEENNMHLSDVLNAVLTKEDGEESLRHFIDPTLQGNY---PLELALLVIRL 596
+ AE+ LS+ E+ L+ +D G Y P V L
Sbjct: 227 S-------LAEQPYQGLSN-----------EQVLKFVMD----GGYLDQPDNCPERVTDL 264
Query: 597 IDACLKKDPTDRPTMYEIEHSLSNILNASL 626
+ C + +P RPT EI + L + L+ S
Sbjct: 265 MRMCWQFNPKMRPTFLEIVNLLKDDLHPSF 294
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 60/262 (22%), Positives = 111/262 (42%), Gaps = 34/262 (12%)
Query: 374 AIKKVNGDVSKEIALLNKINHSNLIILSGVCFNEGNCYLVYEYAVNGTLSDWVFSNKNEG 433
A + D +E LL + H +++ GVC +V+EY +G L+ ++ S+ +
Sbjct: 59 ASESARQDFQREAELLTMLQHQHIVRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDA 118
Query: 434 KY-----------LDWKQRIQIALDVATGLNYLHSFTNPPHVHKDINSSNVLLDSDLRAK 482
K L Q + +A VA G+ YL VH+D+ + N L+ L K
Sbjct: 119 KLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAGLH---FVHRDLATRNCLVGQGLVVK 175
Query: 483 IANFAMARPAEGQEGEFALTRHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLILEMLTGK 542
I +F M+R + R ++ + +M PE + +T+ DV++FGV++ E+ T
Sbjct: 176 IGDFGMSRDIYSTDYYRVGGRTMLPIR-WMPPESILYRKFTTESDVWSFGVVLWEIFT-- 232
Query: 543 EAAALHAEENNMHLSDVLNAVLTKEDGEESLRHFIDPTLQGNYPLELALLVIRLIDACLK 602
+ ++ LS+ A+ G E R P V ++ C +
Sbjct: 233 -----YGKQPWYQLSNT-EAIDCITQGRELER-----------PRACPPEVYAIMRGCWQ 275
Query: 603 KDPTDRPTMYEIEHSLSNILNA 624
++P R ++ ++ L + A
Sbjct: 276 REPQQRHSIKDVHARLQALAQA 297
>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A
Benzimidazole Inhibitor
pdb|3NW5|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11b)
pdb|3NW6|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11a)
pdb|3NW7|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (34)
Length = 307
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 77/311 (24%), Positives = 134/311 (43%), Gaps = 58/311 (18%)
Query: 340 VYSFKELQSATDNFSFTCRI-QGS---VYRGKINGGF-------AAIKKVNGDVS----- 383
VY E + A + + + + QGS VY G G AIK VN S
Sbjct: 7 VYVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERI 66
Query: 384 ---KEIALLNKINHSNLIILSGVCFNEGNCYLVYEYAVNGTLSDWVFSNKNEGKY----- 435
E +++ + N +++ L GV ++ E G L ++ S + E +
Sbjct: 67 EFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLA 126
Query: 436 -LDWKQRIQIALDVATGLNYLHSFTNPPHVHKDINSSNVLLDSDLRAKIANFAMARPAEG 494
+ IQ+A ++A G+ YL++ VH+D+ + N ++ D KI +F M R
Sbjct: 127 PPSLSKMIQMAGEIADGMAYLNANK---FVHRDLAARNCMVAEDFTVKIGDFGMTRDI-- 181
Query: 495 QEGEFALTRHIVGTKG-----YMAPEYLENGLVSTKLDVYAFGVLILEMLTGKEAAALHA 549
+ + G KG +M+PE L++G+ +T DV++FGV++ E+ T A
Sbjct: 182 ----YETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT-------LA 230
Query: 550 EENNMHLSDVLNAVLTKEDGEESLRHFIDPTLQGNYPLELALLVIRLIDACLKKDPTDRP 609
E+ LS+ E+ LR ++ L + P ++ L+ C + +P RP
Sbjct: 231 EQPYQGLSN-----------EQVLRFVMEGGLL-DKPDNCPDMLFELMRMCWQYNPKMRP 278
Query: 610 TMYEIEHSLSN 620
+ EI S+
Sbjct: 279 SFLEIISSIKE 289
>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With Bms-754807
[1-(4-((5-Cyclopropyl-
1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2,
4]triazin-2-Yl)-N-
(6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide]
Length = 315
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 77/310 (24%), Positives = 134/310 (43%), Gaps = 58/310 (18%)
Query: 340 VYSFKELQSATDNFSFTCRI-QGS---VYRGKINGGF-------AAIKKVNGDVS----- 383
VY E + A + + + + QGS VY G G AIK VN S
Sbjct: 7 VYVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERI 66
Query: 384 ---KEIALLNKINHSNLIILSGVCFNEGNCYLVYEYAVNGTLSDWVFSNKNEGKY----- 435
E +++ + N +++ L GV ++ E G L ++ S + E +
Sbjct: 67 EFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLA 126
Query: 436 -LDWKQRIQIALDVATGLNYLHSFTNPPHVHKDINSSNVLLDSDLRAKIANFAMARPAEG 494
+ IQ+A ++A G+ YL++ VH+D+ + N ++ D KI +F M R
Sbjct: 127 PPSLSKMIQMAGEIADGMAYLNANK---FVHRDLAARNCMVAEDFTVKIGDFGMTRDI-- 181
Query: 495 QEGEFALTRHIVGTKG-----YMAPEYLENGLVSTKLDVYAFGVLILEMLTGKEAAALHA 549
+ + G KG +M+PE L++G+ +T DV++FGV++ E+ T A
Sbjct: 182 ----YETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT-------LA 230
Query: 550 EENNMHLSDVLNAVLTKEDGEESLRHFIDPTLQGNYPLELALLVIRLIDACLKKDPTDRP 609
E+ LS+ E+ LR ++ L + P ++ L+ C + +P RP
Sbjct: 231 EQPYQGLSN-----------EQVLRFVMEGGLL-DKPDNCPDMLFELMRMCWQYNPKMRP 278
Query: 610 TMYEIEHSLS 619
+ EI S+
Sbjct: 279 SFLEIISSIK 288
>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor
Kinase
Length = 299
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 68/281 (24%), Positives = 124/281 (44%), Gaps = 44/281 (15%)
Query: 361 GSVYRGKINGGF-------AAIKKVNGDVS--------KEIALLNKINHSNLIILSGVCF 405
G VY G G AIK VN S E +++ + N +++ L GV
Sbjct: 24 GMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVS 83
Query: 406 NEGNCYLVYEYAVNGTLSDWVFSNKNEGKY------LDWKQRIQIALDVATGLNYLHSFT 459
++ E G L ++ S + E + + IQ+A ++A G+ YL++
Sbjct: 84 QGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNANK 143
Query: 460 NPPHVHKDINSSNVLLDSDLRAKIANFAMARPAEGQEGEFALTRHIVGTKGYMAPEYLEN 519
VH+D+ + N ++ D KI +F M R + + ++ + +M+PE L++
Sbjct: 144 ---FVHRDLAARNCMVAEDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVR-WMSPESLKD 199
Query: 520 GLVSTKLDVYAFGVLILEMLTGKEAAALHAEENNMHLSDVLNAVLTKEDGEESLRHFIDP 579
G+ +T DV++FGV++ E+ T AE+ LS+ E+ LR ++
Sbjct: 200 GVFTTYSDVWSFGVVLWEIAT-------LAEQPYQGLSN-----------EQVLRFVMEG 241
Query: 580 TLQGNYPLELALLVIRLIDACLKKDPTDRPTMYEIEHSLSN 620
L + P +++ L+ C + +P RP+ EI S+
Sbjct: 242 GLL-DKPDNCPDMLLELMRMCWQYNPKMRPSFLEIISSIKE 281
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 61/231 (26%), Positives = 103/231 (44%), Gaps = 27/231 (11%)
Query: 381 DVSKEIALLNKINHSNLIILSGVCFNEGNCYLVYEYAVNGTLSDWVFSNKNEGKYLDWKQ 440
D +E+ ++ ++H NLI L GV +V E A G+L D + K++G +L
Sbjct: 61 DFIREVNAMHSLDHRNLIRLYGVVLTP-PMKMVTELAPLGSLLDRL--RKHQGHFL-LGT 116
Query: 441 RIQIALDVATGLNYLHSFTNPPHVHKDINSSNVLLDSDLRAKIANFAMARPAEGQEGEFA 500
+ A+ VA G+ YL S +H+D+ + N+LL + KI +F + R + +
Sbjct: 117 LSRYAVQVAEGMGYLESKR---FIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYV 173
Query: 501 LTRHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLILEMLT-GKEAAALHAEENNMHLSDV 559
+ H + APE L+ S D + FGV + EM T G+E ++ S +
Sbjct: 174 MQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWI------GLNGSQI 227
Query: 560 LNAVLTKEDGEESLRHFIDPTLQGNYPLELALLVIRLIDACLKKDPTDRPT 610
L+ + ++GE R P + + ++ C P DRPT
Sbjct: 228 LHKI--DKEGERLPR-----------PEDCPQDIYNVMVQCWAHKPEDRPT 265
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Phosphopeptide
Length = 306
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 66/270 (24%), Positives = 121/270 (44%), Gaps = 43/270 (15%)
Query: 374 AIKKVNGDVS--------KEIALLNKINHSNLIILSGVCFNEGNCYLVYEYAVNGTLSDW 425
A+K VN S E +++ +++ L GV +V E +G L +
Sbjct: 51 AVKTVNESASLRERIEFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSY 110
Query: 426 VFSNKNEGKY------LDWKQRIQIALDVATGLNYLHSFTNPPHVHKDINSSNVLLDSDL 479
+ S + E + ++ IQ+A ++A G+ YL++ VH+D+ + N ++ D
Sbjct: 111 LRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNA---KKFVHRDLAARNCMVAHDF 167
Query: 480 RAKIANFAMARPAEGQEGEFALTRHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLILEML 539
KI +F M R + + ++ + +MAPE L++G+ +T D+++FGV++ E+
Sbjct: 168 TVKIGDFGMTRDIXETDXXRKGGKGLLPVR-WMAPESLKDGVFTTSSDMWSFGVVLWEIT 226
Query: 540 TGKEAAALHAEENNMHLSDVLNAVLTKEDGEESLRHFIDPTLQGNY---PLELALLVIRL 596
+ AE+ LS+ E+ L+ +D G Y P V L
Sbjct: 227 S-------LAEQPYQGLSN-----------EQVLKFVMD----GGYLDQPDNCPERVTDL 264
Query: 597 IDACLKKDPTDRPTMYEIEHSLSNILNASL 626
+ C + +P RPT EI + L + L+ S
Sbjct: 265 MRMCWQFNPNMRPTFLEIVNLLKDDLHPSF 294
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 51/190 (26%), Positives = 95/190 (50%), Gaps = 21/190 (11%)
Query: 361 GSVYRGKINGGF-AAIKKVN-GDVSK-----EIALLNKINHSNLIILSGVCFNEGNCYLV 413
G V GK G + AIK + G +S+ E ++ ++H L+ L GVC + +++
Sbjct: 23 GVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFII 82
Query: 414 YEYAVNGTLSDWVFSNKNEGKYLDWKQRIQIALDVATGLNYLHSFTNPPHVHKDINSSNV 473
EY NG L +++ ++ + +Q +++ DV + YL S +H+D+ + N
Sbjct: 83 TEYMANGCLLNYLREMRHRFQT---QQLLEMCKDVCEAMEYLES---KQFLHRDLAARNC 136
Query: 474 LLDSDLRAKIANFAMARPAEGQEGEFALTRHIVGTK---GYMAPEYLENGLVSTKLDVYA 530
L++ K+++F ++R E + VG+K + PE L S+K D++A
Sbjct: 137 LVNDQGVVKVSDFGLSRYVLDDEYTSS-----VGSKFPVRWSPPEVLMYSKFSSKSDIWA 191
Query: 531 FGVLILEMLT 540
FGVL+ E+ +
Sbjct: 192 FGVLMWEIYS 201
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 61/231 (26%), Positives = 103/231 (44%), Gaps = 27/231 (11%)
Query: 381 DVSKEIALLNKINHSNLIILSGVCFNEGNCYLVYEYAVNGTLSDWVFSNKNEGKYLDWKQ 440
D +E+ ++ ++H NLI L GV +V E A G+L D + K++G +L
Sbjct: 57 DFIREVNAMHSLDHRNLIRLYGVVLTP-PMKMVTELAPLGSLLDRL--RKHQGHFL-LGT 112
Query: 441 RIQIALDVATGLNYLHSFTNPPHVHKDINSSNVLLDSDLRAKIANFAMARPAEGQEGEFA 500
+ A+ VA G+ YL S +H+D+ + N+LL + KI +F + R + +
Sbjct: 113 LSRYAVQVAEGMGYLESKR---FIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYV 169
Query: 501 LTRHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLILEMLT-GKEAAALHAEENNMHLSDV 559
+ H + APE L+ S D + FGV + EM T G+E ++ S +
Sbjct: 170 MQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWI------GLNGSQI 223
Query: 560 LNAVLTKEDGEESLRHFIDPTLQGNYPLELALLVIRLIDACLKKDPTDRPT 610
L+ + ++GE R P + + ++ C P DRPT
Sbjct: 224 LHKI--DKEGERLPR-----------PEDCPQDIYNVMVQCWAHKPEDRPT 261
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 69/275 (25%), Positives = 121/275 (44%), Gaps = 53/275 (19%)
Query: 374 AIKKVNGDVS--------KEIALLNKINHSNLIILSGVCFNEGNCYLVYEYAVNGTLSDW 425
A+K VN S E +++ +++ L GV +V E +G L +
Sbjct: 50 AVKTVNESASLRERIEFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSY 109
Query: 426 VFSNKNEGKY------LDWKQRIQIALDVATGLNYLHSFTNPPHVHKDINSSNVLLDSDL 479
+ S + E + ++ IQ+A ++A G+ YL++ VH+D+ + N ++ D
Sbjct: 110 LRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNA---KKFVHRDLAARNCMVAHDF 166
Query: 480 RAKIANFAMARPAEGQEGEFALTRHIVGTKG-----YMAPEYLENGLVSTKLDVYAFGVL 534
KI +F M R + + G KG +MAPE L++G+ +T D+++FGV+
Sbjct: 167 TVKIGDFGMTRDI------YETDYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVV 220
Query: 535 ILEMLTGKEAAALHAEENNMHLSDVLNAVLTKEDGEESLRHFIDPTLQGNY---PLELAL 591
+ E+ + AE+ LS+ E+ L+ +D G Y P
Sbjct: 221 LWEITS-------LAEQPYQGLSN-----------EQVLKFVMD----GGYLDQPDNCPE 258
Query: 592 LVIRLIDACLKKDPTDRPTMYEIEHSLSNILNASL 626
V L+ C + +P RPT EI + L + L+ S
Sbjct: 259 RVTDLMRMCWQFNPKMRPTFLEIVNLLKDDLHPSF 293
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 65.9 bits (159), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 51/190 (26%), Positives = 94/190 (49%), Gaps = 21/190 (11%)
Query: 361 GSVYRGKINGGF-AAIKKVN-GDVSK-----EIALLNKINHSNLIILSGVCFNEGNCYLV 413
G V GK G + AIK + G +S+ E ++ ++H L+ L GVC + +++
Sbjct: 29 GVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFII 88
Query: 414 YEYAVNGTLSDWVFSNKNEGKYLDWKQRIQIALDVATGLNYLHSFTNPPHVHKDINSSNV 473
EY NG L +++ ++ +Q +++ DV + YL S +H+D+ + N
Sbjct: 89 TEYMANGCLLNYLREMRHR---FQTQQLLEMCKDVCEAMEYLES---KQFLHRDLAARNC 142
Query: 474 LLDSDLRAKIANFAMARPAEGQEGEFALTRHIVGTK---GYMAPEYLENGLVSTKLDVYA 530
L++ K+++F ++R E + VG+K + PE L S+K D++A
Sbjct: 143 LVNDQGVVKVSDFGLSRYVLDDEYTSS-----VGSKFPVRWSPPEVLMYSKFSSKSDIWA 197
Query: 531 FGVLILEMLT 540
FGVL+ E+ +
Sbjct: 198 FGVLMWEIYS 207
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 51/187 (27%), Positives = 88/187 (47%), Gaps = 15/187 (8%)
Query: 358 RIQGSVYRGKINGGFAAIKKVNGDVSKEIALLNKINHSNLIILSGVCFNEGNCYLVYEYA 417
RI Y K+ +A K + +E+ LL K++H N++ L + + + Y+V E
Sbjct: 44 RITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYIVGELY 103
Query: 418 VNGTLSDWVFSNKNEGKYLDWKQRIQIALDVATGLNYLHSFTNPPHVHKDINSSNVLLDS 477
G L D + K ++ +I V +G+ Y+H VH+D+ N+LL+S
Sbjct: 104 TGGELFDEIIKRKRFSEH----DAARIIKQVFSGITYMHKHN---IVHRDLKPENILLES 156
Query: 478 ---DLRAKIANFAMARPAEGQEGEFALTRHIVGTKGYMAPEYLENGLVSTKLDVYAFGVL 534
D KI +F ++ + + +GT Y+APE L G K DV++ GV+
Sbjct: 157 KEKDCDIKIIDFGLSTCFQQN----TKMKDRIGTAYYIAPEVL-RGTYDEKCDVWSAGVI 211
Query: 535 ILEMLTG 541
+ +L+G
Sbjct: 212 LYILLSG 218
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 66/270 (24%), Positives = 121/270 (44%), Gaps = 43/270 (15%)
Query: 374 AIKKVNGDVS--------KEIALLNKINHSNLIILSGVCFNEGNCYLVYEYAVNGTLSDW 425
A+K VN S E +++ +++ L GV +V E +G L +
Sbjct: 48 AVKTVNESASLRERIEFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSY 107
Query: 426 VFSNKNEGKY------LDWKQRIQIALDVATGLNYLHSFTNPPHVHKDINSSNVLLDSDL 479
+ S + E + ++ IQ+A ++A G+ YL++ VH+D+ + N ++ D
Sbjct: 108 LRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNA---KKFVHRDLAARNCMVAHDF 164
Query: 480 RAKIANFAMARPAEGQEGEFALTRHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLILEML 539
KI +F M R + + ++ + +MAPE L++G+ +T D+++FGV++ E+
Sbjct: 165 TVKIGDFGMTRDIXETDXXRKGGKGLLPVR-WMAPESLKDGVFTTSSDMWSFGVVLWEIT 223
Query: 540 TGKEAAALHAEENNMHLSDVLNAVLTKEDGEESLRHFIDPTLQGNY---PLELALLVIRL 596
+ AE+ LS+ E+ L+ +D G Y P V L
Sbjct: 224 S-------LAEQPYQGLSN-----------EQVLKFVMD----GGYLDQPDNCPERVTDL 261
Query: 597 IDACLKKDPTDRPTMYEIEHSLSNILNASL 626
+ C + +P RPT EI + L + L+ S
Sbjct: 262 MRMCWQFNPKMRPTFLEIVNLLKDDLHPSF 291
>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|B Chain B, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|C Chain C, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|D Chain D, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
Length = 336
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 77/310 (24%), Positives = 134/310 (43%), Gaps = 58/310 (18%)
Query: 340 VYSFKELQSATDNFSFTCRI-QGS---VYRGKINGGF-------AAIKKVNGDVS----- 383
VY E + A + + + + QGS VY G G AIK VN S
Sbjct: 36 VYVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERI 95
Query: 384 ---KEIALLNKINHSNLIILSGVCFNEGNCYLVYEYAVNGTLSDWVFSNKNEGKY----- 435
E +++ + N +++ L GV ++ E G L ++ S + E +
Sbjct: 96 EFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLA 155
Query: 436 -LDWKQRIQIALDVATGLNYLHSFTNPPHVHKDINSSNVLLDSDLRAKIANFAMARPAEG 494
+ IQ+A ++A G+ YL++ VH+D+ + N ++ D KI +F M R
Sbjct: 156 PPSLSKMIQMAGEIADGMAYLNANK---FVHRDLAARNCMVAEDFTVKIGDFGMTRDI-- 210
Query: 495 QEGEFALTRHIVGTKG-----YMAPEYLENGLVSTKLDVYAFGVLILEMLTGKEAAALHA 549
+ + G KG +M+PE L++G+ +T DV++FGV++ E+ T A
Sbjct: 211 ----YETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT-------LA 259
Query: 550 EENNMHLSDVLNAVLTKEDGEESLRHFIDPTLQGNYPLELALLVIRLIDACLKKDPTDRP 609
E+ LS+ E+ LR ++ L + P ++ L+ C + +P RP
Sbjct: 260 EQPYQGLSN-----------EQVLRFVMEGGLL-DKPDNCPDMLFELMRMCWQYNPKMRP 307
Query: 610 TMYEIEHSLS 619
+ EI S+
Sbjct: 308 SFLEIISSIK 317
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 39/132 (29%), Positives = 66/132 (50%), Gaps = 7/132 (5%)
Query: 411 YLVYEYAVNGTLSDWVFSNKNEGKYLDWKQRIQIALDVATGLNYLHSFTNPPHVHKDINS 470
Y+V EY TL D V + EG + K+ I++ D LN+ H +H+D+
Sbjct: 92 YIVMEYVDGVTLRDIVHT---EGP-MTPKRAIEVIADACQALNFSHQNGI---IHRDVKP 144
Query: 471 SNVLLDSDLRAKIANFAMARPAEGQEGEFALTRHIVGTKGYMAPEYLENGLVSTKLDVYA 530
+N+L+ + K+ +F +AR T ++GT Y++PE V + DVY+
Sbjct: 145 ANILISATNAVKVVDFGIARAIADSGNSVXQTAAVIGTAQYLSPEQARGDSVDARSDVYS 204
Query: 531 FGVLILEMLTGK 542
G ++ E+LTG+
Sbjct: 205 LGCVLYEVLTGE 216
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 79/162 (48%), Gaps = 20/162 (12%)
Query: 385 EIALLNKINHSNLIILSGVCFNEGNCYLVYEYAVNGTL-----SDWVFSNKNEGKYLDWK 439
E +L +NH ++ L EG YL+ ++ G L + +F+ ++ YL
Sbjct: 80 ERDILADVNHPFVVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYL--- 136
Query: 440 QRIQIALDVATGLNYLHSFTNPPHVHKDINSSNVLLDSDLRAKIANFAMARPAEGQEGEF 499
++A GL++LHS +++D+ N+LLD + K+ +F +++ A E +
Sbjct: 137 ------AELALGLDHLHSLGI---IYRDLKPENILLDEEGHIKLTDFGLSKEAIDHEKK- 186
Query: 500 ALTRHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLILEMLTG 541
GT YMAPE + S D +++GVL+ EMLTG
Sbjct: 187 --AYSFCGTVEYMAPEVVNRQGHSHSADWWSYGVLMFEMLTG 226
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 51/190 (26%), Positives = 94/190 (49%), Gaps = 21/190 (11%)
Query: 361 GSVYRGKINGGF-AAIKKVN-GDVSK-----EIALLNKINHSNLIILSGVCFNEGNCYLV 413
G V GK G + AIK + G +S+ E ++ ++H L+ L GVC + +++
Sbjct: 38 GVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFII 97
Query: 414 YEYAVNGTLSDWVFSNKNEGKYLDWKQRIQIALDVATGLNYLHSFTNPPHVHKDINSSNV 473
EY NG L +++ ++ +Q +++ DV + YL S +H+D+ + N
Sbjct: 98 TEYMANGCLLNYLREMRHR---FQTQQLLEMCKDVCEAMEYLES---KQFLHRDLAARNC 151
Query: 474 LLDSDLRAKIANFAMARPAEGQEGEFALTRHIVGTK---GYMAPEYLENGLVSTKLDVYA 530
L++ K+++F ++R E + VG+K + PE L S+K D++A
Sbjct: 152 LVNDQGVVKVSDFGLSRYVLDDEYTSS-----VGSKFPVRWSPPEVLMYSKFSSKSDIWA 206
Query: 531 FGVLILEMLT 540
FGVL+ E+ +
Sbjct: 207 FGVLMWEIYS 216
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 83/163 (50%), Gaps = 20/163 (12%)
Query: 384 KEIALLNKINHSNLIILSGVCFNEGNCYLVYEYAVNGTLSDWVFSNKNEGKYLDWKQRIQ 443
+E+ ++ +NH N++ L V E YLV EYA G + D++ ++ G+ + + R +
Sbjct: 62 REVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAH---GRMKEKEARAK 118
Query: 444 IALDVATGLNYLH-SFTNPPHVHKDINSSNVLLDSDLRAKIANFAMARPAEGQEGEFALT 502
+ + + Y H F VH+D+ + N+LLD+D+ KIA+F G EF
Sbjct: 119 FR-QIVSAVQYCHQKFI----VHRDLKAENLLLDADMNIKIADF-------GFSNEFTFG 166
Query: 503 RHI---VGTKGYMAPEYLENGLVS-TKLDVYAFGVLILEMLTG 541
+ G+ Y APE + ++DV++ GV++ +++G
Sbjct: 167 NKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSG 209
>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1
Receptor Kinase In Complex With Pqip
Length = 301
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 77/311 (24%), Positives = 134/311 (43%), Gaps = 58/311 (18%)
Query: 340 VYSFKELQSATDNFSFTCRI-QGS---VYRGKINGGF-------AAIKKVNGDVS----- 383
VY E + A + + + + QGS VY G G AIK VN S
Sbjct: 1 VYVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERI 60
Query: 384 ---KEIALLNKINHSNLIILSGVCFNEGNCYLVYEYAVNGTLSDWVFSNKNEGKY----- 435
E +++ + N +++ L GV ++ E G L ++ S + E +
Sbjct: 61 EFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLA 120
Query: 436 -LDWKQRIQIALDVATGLNYLHSFTNPPHVHKDINSSNVLLDSDLRAKIANFAMARPAEG 494
+ IQ+A ++A G+ YL++ VH+D+ + N + D KI +F M R
Sbjct: 121 PPSLSKMIQMAGEIADGMAYLNANK---FVHRDLAARNCXVAEDFTVKIGDFGMTRDI-- 175
Query: 495 QEGEFALTRHIVGTKG-----YMAPEYLENGLVSTKLDVYAFGVLILEMLTGKEAAALHA 549
+ + G KG +M+PE L++G+ +T DV++FGV++ E+ T A
Sbjct: 176 ----YETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT-------LA 224
Query: 550 EENNMHLSDVLNAVLTKEDGEESLRHFIDPTLQGNYPLELALLVIRLIDACLKKDPTDRP 609
E+ LS+ E+ LR ++ L + P +++ L+ C + +P RP
Sbjct: 225 EQPYQGLSN-----------EQVLRFVMEGGLL-DKPDNCPDMLLELMRMCWQYNPKMRP 272
Query: 610 TMYEIEHSLSN 620
+ EI S+
Sbjct: 273 SFLEIISSIKE 283
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 83/163 (50%), Gaps = 20/163 (12%)
Query: 384 KEIALLNKINHSNLIILSGVCFNEGNCYLVYEYAVNGTLSDWVFSNKNEGKYLDWKQRIQ 443
+E+ ++ +NH N++ L V E YLV EYA G + D++ ++ G+ + + R +
Sbjct: 62 REVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAH---GRMKEKEARAK 118
Query: 444 IALDVATGLNYLH-SFTNPPHVHKDINSSNVLLDSDLRAKIANFAMARPAEGQEGEFALT 502
+ + + Y H F VH+D+ + N+LLD+D+ KIA+F G EF
Sbjct: 119 FR-QIVSAVQYCHQKFI----VHRDLKAENLLLDADMNIKIADF-------GFSNEFTFG 166
Query: 503 RHI---VGTKGYMAPEYLENGLVS-TKLDVYAFGVLILEMLTG 541
+ G+ Y APE + ++DV++ GV++ +++G
Sbjct: 167 NKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSG 209
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 61/231 (26%), Positives = 103/231 (44%), Gaps = 27/231 (11%)
Query: 381 DVSKEIALLNKINHSNLIILSGVCFNEGNCYLVYEYAVNGTLSDWVFSNKNEGKYLDWKQ 440
D +E+ ++ ++H NLI L GV +V E A G+L D + K++G +L
Sbjct: 57 DFIREVNAMHSLDHRNLIRLYGVVLTP-PMKMVTELAPLGSLLDRL--RKHQGHFL-LGT 112
Query: 441 RIQIALDVATGLNYLHSFTNPPHVHKDINSSNVLLDSDLRAKIANFAMARPAEGQEGEFA 500
+ A+ VA G+ YL S +H+D+ + N+LL + KI +F + R + +
Sbjct: 113 LSRYAVQVAEGMGYLESKR---FIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYV 169
Query: 501 LTRHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLILEMLT-GKEAAALHAEENNMHLSDV 559
+ H + APE L+ S D + FGV + EM T G+E ++ S +
Sbjct: 170 MQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWI------GLNGSQI 223
Query: 560 LNAVLTKEDGEESLRHFIDPTLQGNYPLELALLVIRLIDACLKKDPTDRPT 610
L+ + ++GE R P + + ++ C P DRPT
Sbjct: 224 LHKI--DKEGERLPR-----------PEDCPQDIYNVMVQCWAHKPEDRPT 261
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 51/187 (27%), Positives = 88/187 (47%), Gaps = 15/187 (8%)
Query: 358 RIQGSVYRGKINGGFAAIKKVNGDVSKEIALLNKINHSNLIILSGVCFNEGNCYLVYEYA 417
RI Y K+ +A K + +E+ LL K++H N++ L + + + Y+V E
Sbjct: 44 RITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYIVGELY 103
Query: 418 VNGTLSDWVFSNKNEGKYLDWKQRIQIALDVATGLNYLHSFTNPPHVHKDINSSNVLLDS 477
G L D + K ++ +I V +G+ Y+H VH+D+ N+LL+S
Sbjct: 104 TGGELFDEIIKRKRFSEH----DAARIIKQVFSGITYMHKHNI---VHRDLKPENILLES 156
Query: 478 ---DLRAKIANFAMARPAEGQEGEFALTRHIVGTKGYMAPEYLENGLVSTKLDVYAFGVL 534
D KI +F ++ + + +GT Y+APE L G K DV++ GV+
Sbjct: 157 KEKDCDIKIIDFGLSTCFQQN----TKMKDRIGTAYYIAPEVL-RGTYDEKCDVWSAGVI 211
Query: 535 ILEMLTG 541
+ +L+G
Sbjct: 212 LYILLSG 218
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 83/163 (50%), Gaps = 20/163 (12%)
Query: 384 KEIALLNKINHSNLIILSGVCFNEGNCYLVYEYAVNGTLSDWVFSNKNEGKYLDWKQRIQ 443
+E+ ++ +NH N++ L V E YLV EYA G + D++ ++ G+ + + R +
Sbjct: 62 REVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAH---GRMKEKEARAK 118
Query: 444 IALDVATGLNYLH-SFTNPPHVHKDINSSNVLLDSDLRAKIANFAMARPAEGQEGEFALT 502
+ + + Y H F VH+D+ + N+LLD+D+ KIA+F G EF
Sbjct: 119 FR-QIVSAVQYCHQKFI----VHRDLKAENLLLDADMNIKIADF-------GFSNEFTFG 166
Query: 503 RHI---VGTKGYMAPEYLENGLVS-TKLDVYAFGVLILEMLTG 541
+ G+ Y APE + ++DV++ GV++ +++G
Sbjct: 167 NKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSG 209
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 51/187 (27%), Positives = 88/187 (47%), Gaps = 15/187 (8%)
Query: 358 RIQGSVYRGKINGGFAAIKKVNGDVSKEIALLNKINHSNLIILSGVCFNEGNCYLVYEYA 417
RI Y K+ +A K + +E+ LL K++H N++ L + + + Y+V E
Sbjct: 44 RITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYIVGELY 103
Query: 418 VNGTLSDWVFSNKNEGKYLDWKQRIQIALDVATGLNYLHSFTNPPHVHKDINSSNVLLDS 477
G L D + K ++ +I V +G+ Y+H VH+D+ N+LL+S
Sbjct: 104 TGGELFDEIIKRKRFSEH----DAARIIKQVFSGITYMHKHNI---VHRDLKPENILLES 156
Query: 478 ---DLRAKIANFAMARPAEGQEGEFALTRHIVGTKGYMAPEYLENGLVSTKLDVYAFGVL 534
D KI +F ++ + + +GT Y+APE L G K DV++ GV+
Sbjct: 157 KEKDCDIKIIDFGLSTCFQQN----TKMKDRIGTAYYIAPEVL-RGTYDEKCDVWSAGVI 211
Query: 535 ILEMLTG 541
+ +L+G
Sbjct: 212 LYILLSG 218
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 83/163 (50%), Gaps = 20/163 (12%)
Query: 384 KEIALLNKINHSNLIILSGVCFNEGNCYLVYEYAVNGTLSDWVFSNKNEGKYLDWKQRIQ 443
+E+ ++ +NH N++ L V E YLV EYA G + D++ ++ G+ + + R +
Sbjct: 62 REVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAH---GRMKEKEARAK 118
Query: 444 IALDVATGLNYLH-SFTNPPHVHKDINSSNVLLDSDLRAKIANFAMARPAEGQEGEFALT 502
+ + + Y H F VH+D+ + N+LLD+D+ KIA+F G EF
Sbjct: 119 FR-QIVSAVQYCHQKFI----VHRDLKAENLLLDADMNIKIADF-------GFSNEFTFG 166
Query: 503 RHI---VGTKGYMAPEYLENGLVS-TKLDVYAFGVLILEMLTG 541
+ G+ Y APE + ++DV++ GV++ +++G
Sbjct: 167 NKLDEFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSG 209
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 66/298 (22%), Positives = 124/298 (41%), Gaps = 78/298 (26%)
Query: 361 GSVYRGK--INGGFAAIKKV---NGDVSKEIALLNKINHSNLIILSGVCFN--------- 406
G V++ K I+G I++V N +E+ L K++H N++ +G C++
Sbjct: 26 GQVFKAKHRIDGKTYVIRRVKYNNEKAEREVKALAKLDHVNIVHYNG-CWDGFDYDPETS 84
Query: 407 --------------------EGNC-YLVYEYAVNGTLSDWVFSNKNEGKYLDWKQRIQIA 445
+ C ++ E+ GTL W+ K G+ LD +++
Sbjct: 85 DDSLESSDYDPENSKNSSRSKTKCLFIQMEFCDKGTLEQWI--EKRRGEKLDKVLALELF 142
Query: 446 LDVATGLNYLHSFTNPPHVHKDINSSNVLLDSDLRAKIANFAMARPAEGQEGEFALTRHI 505
+ G++Y+HS +H+D+ SN+ L + KI +F + + +G+ ++
Sbjct: 143 EQITKGVDYIHS---KKLIHRDLKPSNIFLVDTKQVKIGDFGLVTSLKN-DGKRTRSK-- 196
Query: 506 VGTKGYMAPEYLENGLVSTKLDVYAFGVLILEML----TGKEAAALHAEENNMHLSDVLN 561
GT YM+PE + + ++D+YA G+++ E+L T E + + + +SD+
Sbjct: 197 -GTLRYMSPEQISSQDYGKEVDLYALGLILAELLHVCDTAFETSKFFTDLRDGIISDIF- 254
Query: 562 AVLTKEDGEESLRHFIDPTLQGNYPLELALLVIRLIDACLKKDPTDRPTMYEIEHSLS 619
D +E L+ L K P DRP EI +L+
Sbjct: 255 ------DKKEKT----------------------LLQKLLSKKPEDRPNTSEILRTLT 284
>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|B Chain B, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|C Chain C, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|D Chain D, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
Length = 301
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 71/286 (24%), Positives = 123/286 (43%), Gaps = 54/286 (18%)
Query: 361 GSVYRGKINGGF-------AAIKKVNGDVS--------KEIALLNKINHSNLIILSGVCF 405
G VY G G AIK VN S E +++ + N +++ L GV
Sbjct: 26 GMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVS 85
Query: 406 NEGNCYLVYEYAVNGTLSDWVFSNKNEGKY------LDWKQRIQIALDVATGLNYLHSFT 459
++ E G L ++ S + E + + IQ+A ++A G+ YL++
Sbjct: 86 QGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNANK 145
Query: 460 NPPHVHKDINSSNVLLDSDLRAKIANFAMARPAEGQEGEFALTRHIVGTKG-----YMAP 514
VH+D+ + N ++ D KI +F M R + + G KG +M+P
Sbjct: 146 ---FVHRDLAARNCMVAEDFTVKIGDFGMTRDI------YETDYYRKGGKGLLPVRWMSP 196
Query: 515 EYLENGLVSTKLDVYAFGVLILEMLTGKEAAALHAEENNMHLSDVLNAVLTKEDGEESLR 574
E L++G+ +T DV++FGV++ E+ T AE+ LS+ E+ LR
Sbjct: 197 ESLKDGVFTTYSDVWSFGVVLWEIAT-------LAEQPYQGLSN-----------EQVLR 238
Query: 575 HFIDPTLQGNYPLELALLVIRLIDACLKKDPTDRPTMYEIEHSLSN 620
++ L + P ++ L+ C + +P RP+ EI S+
Sbjct: 239 FVMEGGLL-DKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKE 283
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex
With An Hydantoin Inhibitor
Length = 305
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 71/286 (24%), Positives = 123/286 (43%), Gaps = 54/286 (18%)
Query: 361 GSVYRGKINGGF-------AAIKKVNGDVS--------KEIALLNKINHSNLIILSGVCF 405
G VY G G AIK VN S E +++ + N +++ L GV
Sbjct: 30 GMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVS 89
Query: 406 NEGNCYLVYEYAVNGTLSDWVFSNKNEGKY------LDWKQRIQIALDVATGLNYLHSFT 459
++ E G L ++ S + E + + IQ+A ++A G+ YL++
Sbjct: 90 QGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNANK 149
Query: 460 NPPHVHKDINSSNVLLDSDLRAKIANFAMARPAEGQEGEFALTRHIVGTKG-----YMAP 514
VH+D+ + N ++ D KI +F M R + + G KG +M+P
Sbjct: 150 ---FVHRDLAARNCMVAEDFTVKIGDFGMTRDI------YETDYYRKGGKGLLPVRWMSP 200
Query: 515 EYLENGLVSTKLDVYAFGVLILEMLTGKEAAALHAEENNMHLSDVLNAVLTKEDGEESLR 574
E L++G+ +T DV++FGV++ E+ T AE+ LS+ E+ LR
Sbjct: 201 ESLKDGVFTTYSDVWSFGVVLWEIAT-------LAEQPYQGLSN-----------EQVLR 242
Query: 575 HFIDPTLQGNYPLELALLVIRLIDACLKKDPTDRPTMYEIEHSLSN 620
++ L + P ++ L+ C + +P RP+ EI S+
Sbjct: 243 FVMEGGLL-DKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKE 287
>pdb|3H9R|A Chain A, Crystal Structure Of The Kinase Domain Of Type I Activin
Receptor (Acvr1) In Complex With Fkbp12 And Dorsomorphin
Length = 330
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 72/294 (24%), Positives = 129/294 (43%), Gaps = 48/294 (16%)
Query: 361 GSVYRGKINGGFAAIKKVNGDVSK----EIALLNKI--NHSNLI--ILSGVCFNEGNC-- 410
G V+RG G A+K + K E L N + H N++ I S + +
Sbjct: 51 GEVWRGSWQGENVAVKIFSSRDEKSWFRETELYNTVMLRHENILGFIASDMTSRHSSTQL 110
Query: 411 YLVYEYAVNGTLSDWVFSNKNEGKYLDWKQRIQIALDVATGLNYLH-----SFTNPPHVH 465
+L+ Y G+L D++ + LD ++I L +A+GL +LH + P H
Sbjct: 111 WLITHYHEMGSLYDYL-----QLTTLDTVSCLRIVLSIASGLAHLHIEIFGTQGKPAIAH 165
Query: 466 KDINSSNVLLDSDLRAKIANFAMARPAEGQEGEFALTRH-IVGTKGYMAPEYLENGLVS- 523
+D+ S N+L+ + + IA+ +A + + + VGTK YMAPE L+ +
Sbjct: 166 RDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKRYMAPEVLDETIQVD 225
Query: 524 -----TKLDVYAFGVLILEMLTGKEAAALHAEENNMHLSDVLNAVLTKEDGEESL----- 573
++D++AFG+++ E+ + + E+ DV+ + ED + +
Sbjct: 226 CFDSYKRVDIWAFGLVLWEVARRMVSNGI-VEDYKPPFYDVVPNDPSFEDMRKVVCVDQQ 284
Query: 574 ------RHFIDPTLQGNYPLELALLVIRLIDACLKKDPTDRPTMYEIEHSLSNI 621
R F DPTL + +L+ C ++P+ R T I+ +L+ I
Sbjct: 285 RPNIPNRWFSDPTLTS---------LAKLMKECWYQNPSARLTALRIKKTLTKI 329
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 47/140 (33%), Positives = 73/140 (52%), Gaps = 11/140 (7%)
Query: 404 CFNE-GNCYLVYEYAVNGTLSDWVFSNKNEGKYLDWKQRIQIALDVATGLNYLHSFTNPP 462
CF Y V EY VNG D ++ + GK+ + Q + A +++ GL +LH
Sbjct: 88 CFQTVDRLYFVMEY-VNG--GDLMYHIQQVGKFKE-PQAVFYAAEISIGLFFLHKRGI-- 141
Query: 463 HVHKDINSSNVLLDSDLRAKIANFAMARPAEGQEGEFALTRHIVGTKGYMAPEYLENGLV 522
+++D+ NV+LDS+ KIA+F M + +G TR GT Y+APE +
Sbjct: 142 -IYRDLKLDNVMLDSEGHIKIADFGMCK-EHMMDG--VTTREFCGTPDYIAPEIIAYQPY 197
Query: 523 STKLDVYAFGVLILEMLTGK 542
+D +A+GVL+ EML G+
Sbjct: 198 GKSVDWWAYGVLLYEMLAGQ 217
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/166 (33%), Positives = 84/166 (50%), Gaps = 16/166 (9%)
Query: 382 VSKEIALLNKINHSNLIILSGVCF--NEGNCYLVYEYAVNGTLSDWVFSNKNEGKYLDWK 439
V +EIA+L K++H N++ L V NE + Y+V+E G + + K L
Sbjct: 83 VYQEIAILKKLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEV-----PTLKPLSED 137
Query: 440 QRIQIALDVATGLNYLHSFTNPPHVHKDINSSNVLLDSDLRAKIANFAMARPAEGQEGEF 499
Q D+ G+ YLH +H+DI SN+L+ D KIA+F ++ +G +
Sbjct: 138 QARFYFQDLIKGIEYLHYQKI---IHRDIKPSNLLVGEDGHIKIADFGVSNEFKGSD--- 191
Query: 500 ALTRHIVGTKGYMAPEYLE--NGLVSTK-LDVYAFGVLILEMLTGK 542
AL + VGT +MAPE L + S K LDV+A GV + + G+
Sbjct: 192 ALLSNTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQ 237
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/222 (27%), Positives = 96/222 (43%), Gaps = 34/222 (15%)
Query: 393 NHSNLIILSGVCFNEGNCYLVYEYAVNGTLSDWVFSNKNEGKYLDWKQRIQIALDVATGL 452
NH L+ L E + V EY VNG D +F + + K + R A +++ L
Sbjct: 111 NHPFLVGLHSCFQTESRLFFVIEY-VNG--GDLMFHMQRQRKLPEEHARFYSA-EISLAL 166
Query: 453 NYLHSFTNPPHVHKDINSSNVLLDSDLRAKIANFAMA----RPAEGQEGEFALTRHIVGT 508
NYLH +++D+ NVLLDS+ K+ ++ M RP + T GT
Sbjct: 167 NYLHERGI---IYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGD-------TTSTFCGT 216
Query: 509 KGYMAPEYLENGLVSTKLDVYAFGVLILEMLTGKEAAALHAEENN--MHLSDVLNAVLTK 566
Y+APE L +D +A GVL+ EM+ G+ + +N + D L V+ +
Sbjct: 217 PNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILE 276
Query: 567 EDGEESLRHFIDPTLQGNYPLELALLVIRLIDACLKKDPTDR 608
+ Q P L++ ++ + L KDP +R
Sbjct: 277 K--------------QIRIPRSLSVKAASVLKSFLNKDPKER 304
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 81/161 (50%), Gaps = 12/161 (7%)
Query: 383 SKEIALLNKINHSNLIILSGVCFNEG--NCYLVYEYAVNGTLSDWVFSNKNEGKYLDWKQ 440
+EI +L + H +++ G C ++G + LV EY G+L D++ + + Q
Sbjct: 59 QREIEILRTLYHEHIVKYKGCCEDQGEKSVQLVMEYVPLGSLRDYLPRH-----CVGLAQ 113
Query: 441 RIQIALDVATGLNYLHSFTNPPHVHKDINSSNVLLDSDLRAKIANFAMARPA-EGQEGEF 499
+ A + G+ YLH+ ++H+ + + NVLLD+D KI +F +A+ EG E +
Sbjct: 114 LLLFAQQICEGMAYLHA---QHYIHRALAARNVLLDNDRLVKIGDFGLAKAVPEGHE-YY 169
Query: 500 ALTRHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLILEMLT 540
+ + APE L+ DV++FGV + E+LT
Sbjct: 170 RVREDGDSPVFWYAPECLKECKFYYASDVWSFGVTLYELLT 210
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 82/163 (50%), Gaps = 20/163 (12%)
Query: 384 KEIALLNKINHSNLIILSGVCFNEGNCYLVYEYAVNGTLSDWVFSNKNEGKYLDWKQRIQ 443
+E+ ++ +NH N++ L V E YLV EYA G + D++ ++ G+ + + R +
Sbjct: 62 REVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAH---GRMKEKEARAK 118
Query: 444 IALDVATGLNYLH-SFTNPPHVHKDINSSNVLLDSDLRAKIANFAMARPAEGQEGEFALT 502
+ + + Y H F VH+D+ + N+LLD+D+ KIA+F G EF
Sbjct: 119 FR-QIVSAVQYCHQKFI----VHRDLKAENLLLDADMNIKIADF-------GFSNEFTFG 166
Query: 503 RHI---VGTKGYMAPEYLENGLVS-TKLDVYAFGVLILEMLTG 541
+ G Y APE + ++DV++ GV++ +++G
Sbjct: 167 NKLDAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSG 209
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/222 (27%), Positives = 96/222 (43%), Gaps = 34/222 (15%)
Query: 393 NHSNLIILSGVCFNEGNCYLVYEYAVNGTLSDWVFSNKNEGKYLDWKQRIQIALDVATGL 452
NH L+ L E + V EY VNG D +F + + K + R A +++ L
Sbjct: 68 NHPFLVGLHSCFQTESRLFFVIEY-VNG--GDLMFHMQRQRKLPEEHARFYSA-EISLAL 123
Query: 453 NYLHSFTNPPHVHKDINSSNVLLDSDLRAKIANFAMA----RPAEGQEGEFALTRHIVGT 508
NYLH +++D+ NVLLDS+ K+ ++ M RP + T GT
Sbjct: 124 NYLHERGI---IYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGD-------TTSXFCGT 173
Query: 509 KGYMAPEYLENGLVSTKLDVYAFGVLILEMLTGKEAAALHAEENN--MHLSDVLNAVLTK 566
Y+APE L +D +A GVL+ EM+ G+ + +N + D L V+ +
Sbjct: 174 PNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILE 233
Query: 567 EDGEESLRHFIDPTLQGNYPLELALLVIRLIDACLKKDPTDR 608
+ Q P L++ ++ + L KDP +R
Sbjct: 234 K--------------QIRIPRSLSVKAASVLKSFLNKDPKER 261
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/222 (27%), Positives = 96/222 (43%), Gaps = 34/222 (15%)
Query: 393 NHSNLIILSGVCFNEGNCYLVYEYAVNGTLSDWVFSNKNEGKYLDWKQRIQIALDVATGL 452
NH L+ L E + V EY VNG D +F + + K + R A +++ L
Sbjct: 64 NHPFLVGLHSCFQTESRLFFVIEY-VNG--GDLMFHMQRQRKLPEEHARFYSA-EISLAL 119
Query: 453 NYLHSFTNPPHVHKDINSSNVLLDSDLRAKIANFAMA----RPAEGQEGEFALTRHIVGT 508
NYLH +++D+ NVLLDS+ K+ ++ M RP + T GT
Sbjct: 120 NYLHERGI---IYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGD-------TTSXFCGT 169
Query: 509 KGYMAPEYLENGLVSTKLDVYAFGVLILEMLTGKEAAALHAEENN--MHLSDVLNAVLTK 566
Y+APE L +D +A GVL+ EM+ G+ + +N + D L V+ +
Sbjct: 170 PNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILE 229
Query: 567 EDGEESLRHFIDPTLQGNYPLELALLVIRLIDACLKKDPTDR 608
+ Q P L++ ++ + L KDP +R
Sbjct: 230 K--------------QIRIPRSLSVKAASVLKSFLNKDPKER 257
>pdb|4DYM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00135
Length = 301
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 72/294 (24%), Positives = 129/294 (43%), Gaps = 48/294 (16%)
Query: 361 GSVYRGKINGGFAAIKKVNGDVSK----EIALLNKI--NHSNLI--ILSGVCFNEGNC-- 410
G V+RG G A+K + K E L N + H N++ I S + +
Sbjct: 22 GEVWRGSWQGENVAVKIFSSRDEKSWFRETELYNTVMLRHENILGFIASDMTSRHSSTQL 81
Query: 411 YLVYEYAVNGTLSDWVFSNKNEGKYLDWKQRIQIALDVATGLNYLH-----SFTNPPHVH 465
+L+ Y G+L D++ + LD ++I L +A+GL +LH + P H
Sbjct: 82 WLITHYHEMGSLYDYL-----QLTTLDTVSCLRIVLSIASGLAHLHIEIFGTQGKPAIAH 136
Query: 466 KDINSSNVLLDSDLRAKIANFAMARPAEGQEGEFALTRH-IVGTKGYMAPEYLENGLVS- 523
+D+ S N+L+ + + IA+ +A + + + VGTK YMAPE L+ +
Sbjct: 137 RDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKRYMAPEVLDETIQVD 196
Query: 524 -----TKLDVYAFGVLILEMLTGKEAAALHAEENNMHLSDVLNAVLTKEDGEESL----- 573
++D++AFG+++ E+ + + E+ DV+ + ED + +
Sbjct: 197 CFDSYKRVDIWAFGLVLWEVARRMVSNGI-VEDYKPPFYDVVPNDPSFEDMRKVVCVDQQ 255
Query: 574 ------RHFIDPTLQGNYPLELALLVIRLIDACLKKDPTDRPTMYEIEHSLSNI 621
R F DPTL + +L+ C ++P+ R T I+ +L+ I
Sbjct: 256 RPNIPNRWFSDPTLTS---------LAKLMKECWYQNPSARLTALRIKKTLTKI 300
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 81/161 (50%), Gaps = 12/161 (7%)
Query: 383 SKEIALLNKINHSNLIILSGVCFNEG--NCYLVYEYAVNGTLSDWVFSNKNEGKYLDWKQ 440
+EI +L + H +++ G C ++G + LV EY G+L D++ + + Q
Sbjct: 58 QREIEILRTLYHEHIVKYKGCCEDQGEKSVQLVMEYVPLGSLRDYLPRH-----CVGLAQ 112
Query: 441 RIQIALDVATGLNYLHSFTNPPHVHKDINSSNVLLDSDLRAKIANFAMARPA-EGQEGEF 499
+ A + G+ YLH+ ++H+ + + NVLLD+D KI +F +A+ EG E +
Sbjct: 113 LLLFAQQICEGMAYLHA---QHYIHRALAARNVLLDNDRLVKIGDFGLAKAVPEGHE-YY 168
Query: 500 ALTRHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLILEMLT 540
+ + APE L+ DV++FGV + E+LT
Sbjct: 169 RVREDGDSPVFWYAPECLKECKFYYASDVWSFGVTLYELLT 209
>pdb|3MTF|A Chain A, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3MTF|B Chain B, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3OOM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00507
pdb|3Q4U|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|B Chain B, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|C Chain C, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|D Chain D, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
Length = 301
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 72/294 (24%), Positives = 129/294 (43%), Gaps = 48/294 (16%)
Query: 361 GSVYRGKINGGFAAIKKVNGDVSK----EIALLNKI--NHSNLI--ILSGVCFNEGNC-- 410
G V+RG G A+K + K E L N + H N++ I S + +
Sbjct: 22 GEVWRGSWQGENVAVKIFSSRDEKSWFRETELYNTVMLRHENILGFIASDMTSRHSSTQL 81
Query: 411 YLVYEYAVNGTLSDWVFSNKNEGKYLDWKQRIQIALDVATGLNYLH-----SFTNPPHVH 465
+L+ Y G+L D++ + LD ++I L +A+GL +LH + P H
Sbjct: 82 WLITHYHEMGSLYDYL-----QLTTLDTVSCLRIVLSIASGLAHLHIEIFGTQGKPAIAH 136
Query: 466 KDINSSNVLLDSDLRAKIANFAMARPAEGQEGEFALTRH-IVGTKGYMAPEYLENGLVS- 523
+D+ S N+L+ + + IA+ +A + + + VGTK YMAPE L+ +
Sbjct: 137 RDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKRYMAPEVLDETIQVD 196
Query: 524 -----TKLDVYAFGVLILEMLTGKEAAALHAEENNMHLSDVLNAVLTKEDGEESL----- 573
++D++AFG+++ E+ + + E+ DV+ + ED + +
Sbjct: 197 CFDSYKRVDIWAFGLVLWEVARRMVSNGI-VEDYKPPFYDVVPNDPSFEDMRKVVCVDQQ 255
Query: 574 ------RHFIDPTLQGNYPLELALLVIRLIDACLKKDPTDRPTMYEIEHSLSNI 621
R F DPTL + +L+ C ++P+ R T I+ +L+ I
Sbjct: 256 RPNIPNRWFSDPTLTS---------LAKLMKECWYQNPSARLTALRIKKTLTKI 300
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 82/162 (50%), Gaps = 18/162 (11%)
Query: 384 KEIALLNKINHSNLIILSGVCFNEGNCYLVYEYAVNGTLSDWVFSNKNEGKYLDWKQRIQ 443
+E+ ++ +NH N++ L V E YLV EYA G + D++ ++ G+ + + R +
Sbjct: 63 REVRIMKILNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAH---GRMKEKEARAK 119
Query: 444 IALDVATGLNYLHSFTNPPHVHKDINSSNVLLDSDLRAKIANFAMARPAEGQEGEFALTR 503
+ + + Y H VH+D+ + N+LLD D+ KIA+F + EF +
Sbjct: 120 FR-QIVSAVQYCHQ---KYIVHRDLKAENLLLDGDMNIKIADFGFS-------NEFTVGN 168
Query: 504 HI---VGTKGYMAPEYLENGLVS-TKLDVYAFGVLILEMLTG 541
+ G+ Y APE + ++DV++ GV++ +++G
Sbjct: 169 KLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSG 210
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/230 (22%), Positives = 107/230 (46%), Gaps = 29/230 (12%)
Query: 385 EIALLNKINHSNLIILSGVCFNEGNCYLVYEYAVNGTLSDWVFSNKNEGKYLDWKQRIQI 444
E+ ++ H N++ + +++ E+ G L+D V + L+ +Q +
Sbjct: 92 EVVIMRDYQHFNVVEMYKSYLVGEELWVLMEFLQGGALTDIVSQVR-----LNEEQIATV 146
Query: 445 ALDVATGLNYLHSFTNPPHVHKDINSSNVLLDSDLRAKIANFAMARPAEGQEGEFALTRH 504
V L YLH+ +H+DI S ++LL D R K+++F + +
Sbjct: 147 CEAVLQALAYLHAQGV---IHRDIKSDSILLTLDGRVKLSDFGFCAQISK---DVPKRKX 200
Query: 505 IVGTKGYMAPEYLENGLVSTKLDVYAFGVLILEMLTGKEAAALHAEENNMHLSDVLNAVL 564
+VGT +MAPE + L +T++D+++ G++++EM+ G+ + SD
Sbjct: 201 LVGTPYWMAPEVISRSLYATEVDIWSLGIMVIEMVDGEPP----------YFSD------ 244
Query: 565 TKEDGEESLRHFIDPTLQGNYPLELALLVIRLIDACLKKDPTDRPTMYEI 614
+ + LR P L+ ++ +++ ++ ++ L +DP +R T E+
Sbjct: 245 SPVQAMKRLRDSPPPKLKNSH--KVSPVLRDFLERMLVRDPQERATAQEL 292
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 38/132 (28%), Positives = 66/132 (50%), Gaps = 7/132 (5%)
Query: 411 YLVYEYAVNGTLSDWVFSNKNEGKYLDWKQRIQIALDVATGLNYLHSFTNPPHVHKDINS 470
Y+V EY TL D V + EG + K+ I++ D LN+ H +H+D+
Sbjct: 92 YIVMEYVDGVTLRDIVHT---EGP-MTPKRAIEVIADACQALNFSHQNGI---IHRDVKP 144
Query: 471 SNVLLDSDLRAKIANFAMARPAEGQEGEFALTRHIVGTKGYMAPEYLENGLVSTKLDVYA 530
+N+++ + K+ +F +AR T ++GT Y++PE V + DVY+
Sbjct: 145 ANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYS 204
Query: 531 FGVLILEMLTGK 542
G ++ E+LTG+
Sbjct: 205 LGCVLYEVLTGE 216
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 38/132 (28%), Positives = 66/132 (50%), Gaps = 7/132 (5%)
Query: 411 YLVYEYAVNGTLSDWVFSNKNEGKYLDWKQRIQIALDVATGLNYLHSFTNPPHVHKDINS 470
Y+V EY TL D V + EG + K+ I++ D LN+ H +H+D+
Sbjct: 92 YIVMEYVDGVTLRDIVHT---EGP-MTPKRAIEVIADACQALNFSHQNGI---IHRDVKP 144
Query: 471 SNVLLDSDLRAKIANFAMARPAEGQEGEFALTRHIVGTKGYMAPEYLENGLVSTKLDVYA 530
+N+++ + K+ +F +AR T ++GT Y++PE V + DVY+
Sbjct: 145 ANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYS 204
Query: 531 FGVLILEMLTGK 542
G ++ E+LTG+
Sbjct: 205 LGCVLYEVLTGE 216
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 38/132 (28%), Positives = 66/132 (50%), Gaps = 7/132 (5%)
Query: 411 YLVYEYAVNGTLSDWVFSNKNEGKYLDWKQRIQIALDVATGLNYLHSFTNPPHVHKDINS 470
Y+V EY TL D V + EG + K+ I++ D LN+ H +H+D+
Sbjct: 92 YIVMEYVDGVTLRDIVHT---EGP-MTPKRAIEVIADACQALNFSHQNGI---IHRDVKP 144
Query: 471 SNVLLDSDLRAKIANFAMARPAEGQEGEFALTRHIVGTKGYMAPEYLENGLVSTKLDVYA 530
+N+++ + K+ +F +AR T ++GT Y++PE V + DVY+
Sbjct: 145 ANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYS 204
Query: 531 FGVLILEMLTGK 542
G ++ E+LTG+
Sbjct: 205 LGCVLYEVLTGE 216
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 38/132 (28%), Positives = 66/132 (50%), Gaps = 7/132 (5%)
Query: 411 YLVYEYAVNGTLSDWVFSNKNEGKYLDWKQRIQIALDVATGLNYLHSFTNPPHVHKDINS 470
Y+V EY TL D V + EG + K+ I++ D LN+ H +H+D+
Sbjct: 92 YIVMEYVDGVTLRDIVHT---EGP-MTPKRAIEVIADACQALNFSHQNGI---IHRDVKP 144
Query: 471 SNVLLDSDLRAKIANFAMARPAEGQEGEFALTRHIVGTKGYMAPEYLENGLVSTKLDVYA 530
+N+++ + K+ +F +AR T ++GT Y++PE V + DVY+
Sbjct: 145 ANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYS 204
Query: 531 FGVLILEMLTGK 542
G ++ E+LTG+
Sbjct: 205 LGCVLYEVLTGE 216
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 42/162 (25%), Positives = 83/162 (51%), Gaps = 18/162 (11%)
Query: 384 KEIALLNKINHSNLIILSGVCFNEGNCYLVYEYAVNGTLSDWVFSNKNEGKYLDWKQRIQ 443
+E+ ++ +NH N++ L V E YL+ EYA G + D++ ++ G+ + + R +
Sbjct: 60 REVRIMKILNHPNIVKLFEVIETEKTLYLIMEYASGGEVFDYLVAH---GRMKEKEARSK 116
Query: 444 IALDVATGLNYLHSFTNPPHVHKDINSSNVLLDSDLRAKIANFAMARPAEGQEGEFALTR 503
+ + + Y H VH+D+ + N+LLD+D+ KIA+F + EF +
Sbjct: 117 FR-QIVSAVQYCH---QKRIVHRDLKAENLLLDADMNIKIADFGFS-------NEFTVGG 165
Query: 504 HI---VGTKGYMAPEYLENGLVS-TKLDVYAFGVLILEMLTG 541
+ G+ Y APE + ++DV++ GV++ +++G
Sbjct: 166 KLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSG 207
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/231 (26%), Positives = 102/231 (44%), Gaps = 27/231 (11%)
Query: 381 DVSKEIALLNKINHSNLIILSGVCFNEGNCYLVYEYAVNGTLSDWVFSNKNEGKYLDWKQ 440
D +E+ ++ ++H NLI L GV +V E A G+L D + K++G +L
Sbjct: 67 DFIREVNAMHSLDHRNLIRLYGVVLTP-PMKMVTELAPLGSLLDRL--RKHQGHFL-LGT 122
Query: 441 RIQIALDVATGLNYLHSFTNPPHVHKDINSSNVLLDSDLRAKIANFAMARPAEGQEGEFA 500
+ A+ VA G+ YL S +H+D+ + N+LL + KI +F + R +
Sbjct: 123 LSRYAVQVAEGMGYLESKR---FIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXV 179
Query: 501 LTRHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLILEMLT-GKEAAALHAEENNMHLSDV 559
+ H + APE L+ S D + FGV + EM T G+E ++ S +
Sbjct: 180 MQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWI------GLNGSQI 233
Query: 560 LNAVLTKEDGEESLRHFIDPTLQGNYPLELALLVIRLIDACLKKDPTDRPT 610
L+ + ++GE R P + + ++ C P DRPT
Sbjct: 234 LHKI--DKEGERLPR-----------PEDCPQDIYNVMVQCWAHKPEDRPT 271
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/222 (26%), Positives = 96/222 (43%), Gaps = 34/222 (15%)
Query: 393 NHSNLIILSGVCFNEGNCYLVYEYAVNGTLSDWVFSNKNEGKYLDWKQRIQIALDVATGL 452
NH L+ L E + V EY VNG D +F + + K + R A +++ L
Sbjct: 79 NHPFLVGLHSCFQTESRLFFVIEY-VNG--GDLMFHMQRQRKLPEEHARFYSA-EISLAL 134
Query: 453 NYLHSFTNPPHVHKDINSSNVLLDSDLRAKIANFAMA----RPAEGQEGEFALTRHIVGT 508
NYLH +++D+ NVLLDS+ K+ ++ M RP + T GT
Sbjct: 135 NYLHERGI---IYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGD-------TTSXFCGT 184
Query: 509 KGYMAPEYLENGLVSTKLDVYAFGVLILEMLTGKEAAALHAEENN--MHLSDVLNAVLTK 566
Y+APE L +D +A GVL+ EM+ G+ + +N + D L V+ +
Sbjct: 185 PNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILE 244
Query: 567 EDGEESLRHFIDPTLQGNYPLELALLVIRLIDACLKKDPTDR 608
+ Q P +++ ++ + L KDP +R
Sbjct: 245 K--------------QIRIPRSMSVKAASVLKSFLNKDPKER 272
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 66/281 (23%), Positives = 118/281 (41%), Gaps = 42/281 (14%)
Query: 363 VYRGK--INGGFAAIKKV----------NGDVSKEIALLNKINHSNLIILSGVCFNEGNC 410
VYR ++G A+KKV D KEI LL ++NH N+I +
Sbjct: 48 VYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNEL 107
Query: 411 YLVYEYAVNGTLSDWVFSNKNEGKYLDWKQRIQIALDVATGLNYLHSFTNPPHVHKDINS 470
+V E A G LS + K + + + + + + + + L ++HS +H+DI
Sbjct: 108 NIVLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHMHSRRV---MHRDIKP 164
Query: 471 SNVLLDSDLRAKIANFAMARPAEGQEGEFALTRHIVGTKGYMAPEYLENGLVSTKLDVYA 530
+NV + + K+ + + R + +VGT YM+PE + + K D+++
Sbjct: 165 ANVFITATGVVKLGDLGLGRFFSSKT---TAAHSLVGTPYYMSPERIHENGYNFKSDIWS 221
Query: 531 FGVLILEMLTGKEAAALHAE--ENNMHLSDVLNAVLTKEDGEESLRHFIDPTLQGNYPLE 588
G L+ EM AAL + + M+L + + + P +Y E
Sbjct: 222 LGCLLYEM------AALQSPFYGDKMNLYSLCKKIEQCD---------YPPLPSDHYSEE 266
Query: 589 LALLVIRLIDACLKKDPTDRPT---MYEIEHSLSNILNASL 626
L +L++ C+ DP RP +Y++ + +SL
Sbjct: 267 LR----QLVNMCINPDPEKRPDVTYVYDVAKRMHACTASSL 303
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/167 (28%), Positives = 83/167 (49%), Gaps = 14/167 (8%)
Query: 377 KVNGDVSKEIALLNKINHSNLIILSGVCFNEGNCYLVYEYAVNGTLSDWVFSNKN---EG 433
K N + E ++ ++H +L+ L GVC + LV + +G L ++V +K+
Sbjct: 82 KANVEFMDEALIMASMDHPHLVRLLGVCLSP-TIQLVTQLMPHGCLLEYVHEHKDNIGSQ 140
Query: 434 KYLDWKQRIQIALDVATGLNYLHSFTNPPHVHKDINSSNVLLDSDLRAKIANFAMARPAE 493
L+W + +A G+ YL VH+D+ + NVL+ S KI +F +AR E
Sbjct: 141 LLLNW------CVQIAKGMMYLEERR---LVHRDLAARNVLVKSPNHVKITDFGLARLLE 191
Query: 494 GQEGEFALTRHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLILEMLT 540
G E E+ + K +MA E + + + DV+++GV I E++T
Sbjct: 192 GDEKEYNADGGKMPIK-WMALECIHYRKFTHQSDVWSYGVTIWELMT 237
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 38/132 (28%), Positives = 66/132 (50%), Gaps = 7/132 (5%)
Query: 411 YLVYEYAVNGTLSDWVFSNKNEGKYLDWKQRIQIALDVATGLNYLHSFTNPPHVHKDINS 470
Y+V EY TL D V + EG + K+ I++ D LN+ H +H+D+
Sbjct: 109 YIVMEYVDGVTLRDIVHT---EGP-MTPKRAIEVIADACQALNFSHQNGI---IHRDVKP 161
Query: 471 SNVLLDSDLRAKIANFAMARPAEGQEGEFALTRHIVGTKGYMAPEYLENGLVSTKLDVYA 530
+N+++ + K+ +F +AR T ++GT Y++PE V + DVY+
Sbjct: 162 ANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYS 221
Query: 531 FGVLILEMLTGK 542
G ++ E+LTG+
Sbjct: 222 LGCVLYEVLTGE 233
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/231 (26%), Positives = 102/231 (44%), Gaps = 27/231 (11%)
Query: 381 DVSKEIALLNKINHSNLIILSGVCFNEGNCYLVYEYAVNGTLSDWVFSNKNEGKYLDWKQ 440
D +E+ ++ ++H NLI L GV +V E A G+L D + K++G +L
Sbjct: 57 DFIREVNAMHSLDHRNLIRLYGVVLTP-PMKMVTELAPLGSLLDRL--RKHQGHFL-LGT 112
Query: 441 RIQIALDVATGLNYLHSFTNPPHVHKDINSSNVLLDSDLRAKIANFAMARPAEGQEGEFA 500
+ A+ VA G+ YL S +H+D+ + N+LL + KI +F + R +
Sbjct: 113 LSRYAVQVAEGMGYLESKR---FIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXV 169
Query: 501 LTRHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLILEMLT-GKEAAALHAEENNMHLSDV 559
+ H + APE L+ S D + FGV + EM T G+E ++ S +
Sbjct: 170 MQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWI------GLNGSQI 223
Query: 560 LNAVLTKEDGEESLRHFIDPTLQGNYPLELALLVIRLIDACLKKDPTDRPT 610
L+ + ++GE R P + + ++ C P DRPT
Sbjct: 224 LHKI--DKEGERLPR-----------PEDCPQDIYNVMVQCWAHKPEDRPT 261
>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution.
pdb|1P4O|B Chain B, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution
Length = 322
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 77/311 (24%), Positives = 132/311 (42%), Gaps = 58/311 (18%)
Query: 340 VYSFKELQSATDNFSFTCRI-QGS---VYRGKINGGF-------AAIKKVNGDVS----- 383
VY E + A + + + + QGS VY G G AIK VN S
Sbjct: 14 VYVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERI 73
Query: 384 ---KEIALLNKINHSNLIILSGVCFNEGNCYLVYEYAVNGTLSDWVFS------NKNEGK 434
E +++ + N +++ L GV ++ E G L ++ S N
Sbjct: 74 EFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLA 133
Query: 435 YLDWKQRIQIALDVATGLNYLHSFTNPPHVHKDINSSNVLLDSDLRAKIANFAMARPAEG 494
+ IQ+A ++A G+ YL++ VH+D+ + N ++ D KI +F M R
Sbjct: 134 PPSLSKMIQMAGEIADGMAYLNANK---FVHRDLAARNCMVAEDFTVKIGDFGMTRDI-- 188
Query: 495 QEGEFALTRHIVGTKG-----YMAPEYLENGLVSTKLDVYAFGVLILEMLTGKEAAALHA 549
+ + G KG +M+PE L++G+ +T DV++FGV++ E+ T A
Sbjct: 189 ----YETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT-------LA 237
Query: 550 EENNMHLSDVLNAVLTKEDGEESLRHFIDPTLQGNYPLELALLVIRLIDACLKKDPTDRP 609
E+ LS+ E+ LR ++ L + P ++ L+ C + +P RP
Sbjct: 238 EQPYQGLSN-----------EQVLRFVMEGGLL-DKPDNCPDMLFELMRMCWQYNPKMRP 285
Query: 610 TMYEIEHSLSN 620
+ EI S+
Sbjct: 286 SFLEIISSIKE 296
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 82/162 (50%), Gaps = 18/162 (11%)
Query: 384 KEIALLNKINHSNLIILSGVCFNEGNCYLVYEYAVNGTLSDWVFSNKNEGKYLDWKQRIQ 443
+E+ ++ +NH N++ L V E YL+ EYA G + D++ ++ G+ + + R +
Sbjct: 63 REVRIMKILNHPNIVKLFEVIETEKTLYLIMEYASGGEVFDYLVAH---GRMKEKEARSK 119
Query: 444 IALDVATGLNYLHSFTNPPHVHKDINSSNVLLDSDLRAKIANFAMARPAEGQEGEFALTR 503
+ + + Y H VH+D+ + N+LLD+D+ KIA+F G EF +
Sbjct: 120 FR-QIVSAVQYCH---QKRIVHRDLKAENLLLDADMNIKIADF-------GFSNEFTVGG 168
Query: 504 HI---VGTKGYMAPEYLENGLVS-TKLDVYAFGVLILEMLTG 541
+ G Y APE + ++DV++ GV++ +++G
Sbjct: 169 KLDAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSG 210
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 81/161 (50%), Gaps = 15/161 (9%)
Query: 384 KEIALLNKINHSNLIILSGVCFNEGNCYLVYEYAVNGTLSDWVFSNKNEGKYLDWKQRIQ 443
+E+ LL +++H N++ L ++G YLV E G L D + S K + +
Sbjct: 81 REVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEV----DAAR 136
Query: 444 IALDVATGLNYLHSFTNPPHVHKDINSSNVLLDS---DLRAKIANFAMARPAEGQEGEFA 500
I V +G+ Y+H VH+D+ N+LL+S D +I +F ++ E +
Sbjct: 137 IIRQVLSGITYMH---KNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKK--- 190
Query: 501 LTRHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLILEMLTG 541
+ +GT Y+APE L +G K DV++ GV++ +L+G
Sbjct: 191 -MKDKIGTAYYIAPEVL-HGTYDEKCDVWSTGVILYILLSG 229
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 70/257 (27%), Positives = 109/257 (42%), Gaps = 45/257 (17%)
Query: 375 IKKVNGDVSK--------EIALLNKINHSNLIILSGVCFNEGNCYLVYEYAVNGTLSDWV 426
IK +N D S+ EI +L ++H N+I + V + N Y+V E G L + +
Sbjct: 52 IKTINKDRSQVPMEQIEAEIEVLKSLDHPNIIKIFEVFEDYHNMYIVMETCEGGELLERI 111
Query: 427 FSNKNEGKYLDWKQRIQIALDVATGLNYLHSFTNPPH-VHKDINSSNVLL-DSDLRA--K 482
S + GK L ++ + L Y HS H VHKD+ N+L D+ + K
Sbjct: 112 VSAQARGKALSEGYVAELMKQMMNALAYFHS----QHVVHKDLKPENILFQDTSPHSPIK 167
Query: 483 IANFAMARPAEGQEGEFALTRHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLILEMLTGK 542
I +F +A + E + + GT YMAPE + V+ K D+++ GV++ +LTG
Sbjct: 168 IIDFGLAELFKSDEH----STNAAGTALYMAPEVFKRD-VTFKCDIWSAGVVMYFLLTGC 222
Query: 543 EAAALHAEENNMHLSDVLNAVLTKEDGEESLRHFIDPTLQGNYPLE---LALLVIRLIDA 599
L +V KE NY +E L + L+
Sbjct: 223 LPF------TGTSLEEVQQKATYKEP---------------NYAVECRPLTPQAVDLLKQ 261
Query: 600 CLKKDPTDRPTMYEIEH 616
L KDP RP+ ++ H
Sbjct: 262 MLTKDPERRPSAAQVLH 278
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 48/167 (28%), Positives = 83/167 (49%), Gaps = 14/167 (8%)
Query: 377 KVNGDVSKEIALLNKINHSNLIILSGVCFNEGNCYLVYEYAVNGTLSDWVFSNKN---EG 433
K N + E ++ ++H +L+ L GVC + LV + +G L ++V +K+
Sbjct: 59 KANVEFMDEALIMASMDHPHLVRLLGVCLSP-TIQLVTQLMPHGCLLEYVHEHKDNIGSQ 117
Query: 434 KYLDWKQRIQIALDVATGLNYLHSFTNPPHVHKDINSSNVLLDSDLRAKIANFAMARPAE 493
L+W + +A G+ YL VH+D+ + NVL+ S KI +F +AR E
Sbjct: 118 LLLNW------CVQIAKGMMYLEERR---LVHRDLAARNVLVKSPNHVKITDFGLARLLE 168
Query: 494 GQEGEFALTRHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLILEMLT 540
G E E+ + K +MA E + + + DV+++GV I E++T
Sbjct: 169 GDEKEYNADGGKMPIK-WMALECIHYRKFTHQSDVWSYGVTIWELMT 214
>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|B Chain B, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|C Chain C, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|D Chain D, Igf-1rk In Complex With Ligand Msc1609119a-1
Length = 304
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 77/311 (24%), Positives = 132/311 (42%), Gaps = 58/311 (18%)
Query: 340 VYSFKELQSATDNFSFTCRI-QGS---VYRGKINGGF-------AAIKKVNGDVS----- 383
VY E + A + + + + QGS VY G G AIK VN S
Sbjct: 4 VYVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERI 63
Query: 384 ---KEIALLNKINHSNLIILSGVCFNEGNCYLVYEYAVNGTLSDWVFS------NKNEGK 434
E +++ + N +++ L GV ++ E G L ++ S N
Sbjct: 64 EFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLA 123
Query: 435 YLDWKQRIQIALDVATGLNYLHSFTNPPHVHKDINSSNVLLDSDLRAKIANFAMARPAEG 494
+ IQ+A ++A G+ YL++ VH+D+ + N ++ D KI +F M R
Sbjct: 124 PPSLSKMIQMAGEIADGMAYLNANK---FVHRDLAARNCMVAEDFTVKIGDFGMTRDI-- 178
Query: 495 QEGEFALTRHIVGTKG-----YMAPEYLENGLVSTKLDVYAFGVLILEMLTGKEAAALHA 549
+ + G KG +M+PE L++G+ +T DV++FGV++ E+ T A
Sbjct: 179 ----YETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT-------LA 227
Query: 550 EENNMHLSDVLNAVLTKEDGEESLRHFIDPTLQGNYPLELALLVIRLIDACLKKDPTDRP 609
E+ LS+ E+ LR ++ L + P ++ L+ C + +P RP
Sbjct: 228 EQPYQGLSN-----------EQVLRFVMEGGLL-DKPDNCPDMLFELMRMCWQYNPKMRP 275
Query: 610 TMYEIEHSLSN 620
+ EI S+
Sbjct: 276 SFLEIISSIKE 286
>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
pdb|3EKN|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
Length = 307
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 68/275 (24%), Positives = 121/275 (44%), Gaps = 53/275 (19%)
Query: 374 AIKKVNGDVS--------KEIALLNKINHSNLIILSGVCFNEGNCYLVYEYAVNGTLSDW 425
A+K VN S E +++ +++ L GV +V E +G L +
Sbjct: 52 AVKTVNESASLRERIEFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSY 111
Query: 426 VFSNKNEGKY------LDWKQRIQIALDVATGLNYLHSFTNPPHVHKDINSSNVLLDSDL 479
+ S + E + ++ IQ+A ++A G+ YL++ VH+++ + N ++ D
Sbjct: 112 LRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNA---KKFVHRNLAARNCMVAHDF 168
Query: 480 RAKIANFAMARPAEGQEGEFALTRHIVGTKG-----YMAPEYLENGLVSTKLDVYAFGVL 534
KI +F M R + + G KG +MAPE L++G+ +T D+++FGV+
Sbjct: 169 TVKIGDFGMTRDI------YETDYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVV 222
Query: 535 ILEMLTGKEAAALHAEENNMHLSDVLNAVLTKEDGEESLRHFIDPTLQGNY---PLELAL 591
+ E+ + AE+ LS+ E+ L+ +D G Y P
Sbjct: 223 LWEITS-------LAEQPYQGLSN-----------EQVLKFVMD----GGYLDQPDNCPE 260
Query: 592 LVIRLIDACLKKDPTDRPTMYEIEHSLSNILNASL 626
V L+ C + +P RPT EI + L + L+ S
Sbjct: 261 RVTDLMRMCWQFNPNMRPTFLEIVNLLKDDLHPSF 295
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 81/161 (50%), Gaps = 15/161 (9%)
Query: 384 KEIALLNKINHSNLIILSGVCFNEGNCYLVYEYAVNGTLSDWVFSNKNEGKYLDWKQRIQ 443
+E+ LL +++H N++ L ++G YLV E G L D + S K + +
Sbjct: 75 REVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEV----DAAR 130
Query: 444 IALDVATGLNYLHSFTNPPHVHKDINSSNVLLDS---DLRAKIANFAMARPAEGQEGEFA 500
I V +G+ Y+H VH+D+ N+LL+S D +I +F ++ E +
Sbjct: 131 IIRQVLSGITYMH---KNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKK--- 184
Query: 501 LTRHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLILEMLTG 541
+ +GT Y+APE L +G K DV++ GV++ +L+G
Sbjct: 185 -MKDKIGTAYYIAPEVL-HGTYDEKCDVWSTGVILYILLSG 223
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 50/147 (34%), Positives = 75/147 (51%), Gaps = 10/147 (6%)
Query: 409 NCYLVYEYAVNGTLSDWVFSNKNEGKYLDWKQRIQIALDVATGLNYLHSFTNPPHVHKDI 468
N + V EY +NG D ++ ++ K+ D + A ++ GL +LHS V++D+
Sbjct: 93 NLFFVMEY-LNG--GDLMYHIQSCHKF-DLSRATFYAAEIILGLQFLHS---KGIVYRDL 145
Query: 469 NSSNVLLDSDLRAKIANFAMARPAEGQEGEFALTRHIVGTKGYMAPEYLENGLVSTKLDV 528
N+LLD D KIA+F M + E G+ A T GT Y+APE L + +D
Sbjct: 146 KLDNILLDKDGHIKIADFGMCK--ENMLGD-AKTNEFCGTPDYIAPEILLGQKYNHSVDW 202
Query: 529 YAFGVLILEMLTGKEAAALHAEENNMH 555
++FGVL+ EML G+ EE H
Sbjct: 203 WSFGVLLYEMLIGQSPFHGQDEEELFH 229
>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The
Insulin Receptor Tyrosine Kinase
Length = 306
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 68/275 (24%), Positives = 121/275 (44%), Gaps = 53/275 (19%)
Query: 374 AIKKVNGDVS--------KEIALLNKINHSNLIILSGVCFNEGNCYLVYEYAVNGTLSDW 425
A+K VN S E +++ +++ L GV +V E +G L +
Sbjct: 51 AVKTVNESASLRERIEFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSY 110
Query: 426 VFSNKNEGKY------LDWKQRIQIALDVATGLNYLHSFTNPPHVHKDINSSNVLLDSDL 479
+ S + E + ++ IQ+A ++A G+ YL++ VH+++ + N ++ D
Sbjct: 111 LRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNA---KKFVHRNLAARNCMVAHDF 167
Query: 480 RAKIANFAMARPAEGQEGEFALTRHIVGTKG-----YMAPEYLENGLVSTKLDVYAFGVL 534
KI +F M R + + G KG +MAPE L++G+ +T D+++FGV+
Sbjct: 168 TVKIGDFGMTRDI------YETDYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVV 221
Query: 535 ILEMLTGKEAAALHAEENNMHLSDVLNAVLTKEDGEESLRHFIDPTLQGNY---PLELAL 591
+ E+ + AE+ LS+ E+ L+ +D G Y P
Sbjct: 222 LWEITS-------LAEQPYQGLSN-----------EQVLKFVMD----GGYLDQPDNCPE 259
Query: 592 LVIRLIDACLKKDPTDRPTMYEIEHSLSNILNASL 626
V L+ C + +P RPT EI + L + L+ S
Sbjct: 260 RVTDLMRMCWQFNPNMRPTFLEIVNLLKDDLHPSF 294
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 54/229 (23%), Positives = 100/229 (43%), Gaps = 41/229 (17%)
Query: 385 EIALLNKINHSNLIILSGVCFNEGNCYLVYEYAVNGTL-----SDWVFSNKNEGKYLDWK 439
E +L ++NH ++ L EG YL+ ++ G L + +F+ ++ YL
Sbjct: 76 ERDILVEVNHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYL--- 132
Query: 440 QRIQIALDVATGLNYLHSFTNPPHVHKDINSSNVLLDSDLRAKIANFAMARPAEGQEGEF 499
++A L++LHS +++D+ N+LLD + K+ +F +++ + E +
Sbjct: 133 ------AELALALDHLHSLGI---IYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKK- 182
Query: 500 ALTRHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLILEMLTGKEAAALHAEENNMHLSDV 559
GT YMAPE + + D ++FGVL+ EMLTG ++ ++ +
Sbjct: 183 --AYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTG--TLPFQGKDRKETMTMI 238
Query: 560 LNAVLTKEDGEESLRHFIDPTLQGNYPLELALLVIRLIDACLKKDPTDR 608
L A L + F+ P Q L+ K++P +R
Sbjct: 239 LKAKL-------GMPQFLSPEAQS------------LLRMLFKRNPANR 268
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 81/161 (50%), Gaps = 15/161 (9%)
Query: 384 KEIALLNKINHSNLIILSGVCFNEGNCYLVYEYAVNGTLSDWVFSNKNEGKYLDWKQRIQ 443
+E+ LL +++H N++ L ++G YLV E G L D + S K + +
Sbjct: 98 REVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEV----DAAR 153
Query: 444 IALDVATGLNYLHSFTNPPHVHKDINSSNVLLDS---DLRAKIANFAMARPAEGQEGEFA 500
I V +G+ Y+H VH+D+ N+LL+S D +I +F ++ E +
Sbjct: 154 IIRQVLSGITYMH---KNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKK--- 207
Query: 501 LTRHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLILEMLTG 541
+ +GT Y+APE L +G K DV++ GV++ +L+G
Sbjct: 208 -MKDKIGTAYYIAPEVL-HGTYDEKCDVWSTGVILYILLSG 246
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 81/161 (50%), Gaps = 15/161 (9%)
Query: 384 KEIALLNKINHSNLIILSGVCFNEGNCYLVYEYAVNGTLSDWVFSNKNEGKYLDWKQRIQ 443
+E+ LL +++H N++ L ++G YLV E G L D + S K + +
Sbjct: 99 REVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEV----DAAR 154
Query: 444 IALDVATGLNYLHSFTNPPHVHKDINSSNVLLDS---DLRAKIANFAMARPAEGQEGEFA 500
I V +G+ Y+H VH+D+ N+LL+S D +I +F ++ E +
Sbjct: 155 IIRQVLSGITYMH---KNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKK--- 208
Query: 501 LTRHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLILEMLTG 541
+ +GT Y+APE L +G K DV++ GV++ +L+G
Sbjct: 209 -MKDKIGTAYYIAPEVL-HGTYDEKCDVWSTGVILYILLSG 247
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 71/239 (29%), Positives = 106/239 (44%), Gaps = 43/239 (17%)
Query: 351 DNFSFTCRIQGSVYRGKI-------NGGFAAIKKVNGDV------------SKEIALLNK 391
DNF F R+ G GK+ G A+K + DV K I L +
Sbjct: 23 DNFEFI-RVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLAR 81
Query: 392 INHSNLIILSGVCFNEGN-CYLVYEYAVNGTLSDWVFSNKNEGKYLDWKQRIQIALDVAT 450
NH L L CF + + V E+ VNG D +F + ++ + + R A ++ +
Sbjct: 82 -NHPFLTQLF-CCFQTPDRLFFVMEF-VNG--GDLMFHIQKSRRFDEARARF-YAAEIIS 135
Query: 451 GLNYLHSFTNPPHVHKDINSSNVLLDSDLRAKIANFAMARPAEGQEG--EFALTRHIVGT 508
L +LH + +++D+ NVLLD + K+A+F M + EG T GT
Sbjct: 136 ALMFLH---DKGIIYRDLKLDNVLLDHEGHCKLADFGMCK-----EGICNGVTTATFCGT 187
Query: 509 KGYMAPEYLENGLVSTKLDVYAFGVLILEMLTGKEAAALHAEENNMHLSDVLNAVLTKE 567
Y+APE L+ L +D +A GVL+ EML G A AE + D+ A+L E
Sbjct: 188 PDYIAPEILQEMLYGPAVDWWAMGVLLYEMLCGH--APFEAENED----DLFEAILNDE 240
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 50/147 (34%), Positives = 75/147 (51%), Gaps = 10/147 (6%)
Query: 409 NCYLVYEYAVNGTLSDWVFSNKNEGKYLDWKQRIQIALDVATGLNYLHSFTNPPHVHKDI 468
N + V EY +NG D ++ ++ K+ D + A ++ GL +LHS V++D+
Sbjct: 92 NLFFVMEY-LNG--GDLMYHIQSCHKF-DLSRATFYAAEIILGLQFLHS---KGIVYRDL 144
Query: 469 NSSNVLLDSDLRAKIANFAMARPAEGQEGEFALTRHIVGTKGYMAPEYLENGLVSTKLDV 528
N+LLD D KIA+F M + E G+ A T GT Y+APE L + +D
Sbjct: 145 KLDNILLDKDGHIKIADFGMCK--ENMLGD-AKTNXFCGTPDYIAPEILLGQKYNHSVDW 201
Query: 529 YAFGVLILEMLTGKEAAALHAEENNMH 555
++FGVL+ EML G+ EE H
Sbjct: 202 WSFGVLLYEMLIGQSPFHGQDEEELFH 228
>pdb|1PY5|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With
Inhibitor
Length = 326
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 70/290 (24%), Positives = 127/290 (43%), Gaps = 40/290 (13%)
Query: 361 GSVYRGKINGGFAAIKKVNGDVSK------EIALLNKINHSNLI-ILSGVCFNEG---NC 410
G V+RGK G A+K + + EI + H N++ ++ + G
Sbjct: 43 GEVWRGKWRGEEVAVKIFSSREERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQL 102
Query: 411 YLVYEYAVNGTLSDWV--FSNKNEGKYLDWKQRIQIALDVATGLNYLH-----SFTNPPH 463
+LV +Y +G+L D++ ++ EG I++AL A+GL +LH + P
Sbjct: 103 WLVSDYHEHGSLFDYLNRYTVTVEGM-------IKLALSTASGLAHLHMEIVGTQGKPAI 155
Query: 464 VHKDINSSNVLLDSDLRAKIANFAMARPAEGQEGEFALT-RHIVGTKGYMAPEYLENGL- 521
H+D+ S N+L+ + IA+ +A + + H VGTK YMAPE L++ +
Sbjct: 156 AHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSIN 215
Query: 522 -----VSTKLDVYAFGVLILEMLTGKEAAALHAEENNMHLSDVLNAVLTKEDGEESLRHF 576
+ D+YA G++ E+ +H E+ + D+ V + EE +
Sbjct: 216 MKHFESFKRADIYAMGLVFWEIARRCSIGGIH-EDYQLPYYDL---VPSDPSVEEMRKVV 271
Query: 577 IDPTLQGNYP-----LELALLVIRLIDACLKKDPTDRPTMYEIEHSLSNI 621
+ L+ N P E ++ +++ C + R T I+ +LS +
Sbjct: 272 CEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQL 321
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 81/163 (49%), Gaps = 20/163 (12%)
Query: 384 KEIALLNKINHSNLIILSGVCFNEGNCYLVYEYAVNGTLSDWVFSNKNEGKYLDWKQRIQ 443
+E+ ++ +NH N++ L V E YLV EYA G + D++ ++ ++ K+
Sbjct: 55 REVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAH----GWMKEKEARA 110
Query: 444 IALDVATGLNYLH-SFTNPPHVHKDINSSNVLLDSDLRAKIANFAMARPAEGQEGEFALT 502
+ + + Y H F VH+D+ + N+LLD+D+ KIA+F G EF
Sbjct: 111 KFRQIVSAVQYCHQKFI----VHRDLKAENLLLDADMNIKIADF-------GFSNEFTFG 159
Query: 503 RHI---VGTKGYMAPEYLENGLVS-TKLDVYAFGVLILEMLTG 541
+ G+ Y APE + ++DV++ GV++ +++G
Sbjct: 160 NKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSG 202
>pdb|1B6C|B Chain B, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|D Chain D, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|F Chain F, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|H Chain H, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1IAS|A Chain A, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|B Chain B, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|C Chain C, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|D Chain D, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|E Chain E, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|3FAA|A Chain A, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|B Chain B, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|C Chain C, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|D Chain D, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|E Chain E, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3KCF|A Chain A, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|B Chain B, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|C Chain C, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|D Chain D, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|E Chain E, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|2X7O|A Chain A, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|B Chain B, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|C Chain C, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|D Chain D, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|E Chain E, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
Length = 342
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 70/290 (24%), Positives = 127/290 (43%), Gaps = 40/290 (13%)
Query: 361 GSVYRGKINGGFAAIKKVNGDVSK------EIALLNKINHSNLI-ILSGVCFNEG---NC 410
G V+RGK G A+K + + EI + H N++ ++ + G
Sbjct: 56 GEVWRGKWRGEEVAVKIFSSREERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQL 115
Query: 411 YLVYEYAVNGTLSDWV--FSNKNEGKYLDWKQRIQIALDVATGLNYLH-----SFTNPPH 463
+LV +Y +G+L D++ ++ EG I++AL A+GL +LH + P
Sbjct: 116 WLVSDYHEHGSLFDYLNRYTVTVEGM-------IKLALSTASGLAHLHMEIVGTQGKPAI 168
Query: 464 VHKDINSSNVLLDSDLRAKIANFAMARPAEGQEGEFALT-RHIVGTKGYMAPEYLENGL- 521
H+D+ S N+L+ + IA+ +A + + H VGTK YMAPE L++ +
Sbjct: 169 AHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSIN 228
Query: 522 -----VSTKLDVYAFGVLILEMLTGKEAAALHAEENNMHLSDVLNAVLTKEDGEESLRHF 576
+ D+YA G++ E+ +H E+ + D+ V + EE +
Sbjct: 229 MKHFESFKRADIYAMGLVFWEIARRCSIGGIH-EDYQLPYYDL---VPSDPSVEEMRKVV 284
Query: 577 IDPTLQGNYP-----LELALLVIRLIDACLKKDPTDRPTMYEIEHSLSNI 621
+ L+ N P E ++ +++ C + R T I+ +LS +
Sbjct: 285 CEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQL 334
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 95/200 (47%), Gaps = 35/200 (17%)
Query: 361 GSVYRGK-INGGFAAIKKVNGDVS---------KEIALLNKINHSNLIILSGVCFNEGNC 410
G VY+ K G A+K++ D +EI+LL +++H N++ L V +E
Sbjct: 35 GVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDVIHSERCL 94
Query: 411 YLVYEYAVNGTLSDWVFSNKNEGKYLDWKQ------RIQIAL-DVATGLNYLHSFTNPPH 463
LV+E F K+ K LD + +I+I L + G+ + H
Sbjct: 95 TLVFE-----------FMEKDLKKVLDENKTGLQDSQIKIYLYQLLRGVAHCHQHRI--- 140
Query: 464 VHKDINSSNVLLDSDLRAKIANFAMARPAEGQEGEFALTRHIVGTKGYMAPEYLE-NGLV 522
+H+D+ N+L++SD K+A+F +AR + H V T Y AP+ L +
Sbjct: 141 LHRDLKPQNLLINSDGALKLADFGLARAFGIPVRSYT---HEVVTLWYRAPDVLMGSKKY 197
Query: 523 STKLDVYAFGVLILEMLTGK 542
ST +D+++ G + EM+TGK
Sbjct: 198 STSVDIWSIGCIFAEMITGK 217
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 67/245 (27%), Positives = 109/245 (44%), Gaps = 38/245 (15%)
Query: 384 KEIALLNKINHSNLIILSGVCFNEGNCYLVYEYAVNGTLSDWVFSNKNEGKYLDWKQRIQ 443
+E + + +H +++ L GV E +++ E G L ++ K LD I
Sbjct: 88 QEALTMRQFDHPHIVKLIGV-ITENPVWIIMELCTLGELRSFLQVRKYS---LDLASLIL 143
Query: 444 IALDVATGLNYLHSFTNPPHVHKDINSSNVLLDSDLRAKIANFAMARPAEGQEGEFALTR 503
A ++T L YL S VH+DI + NVL+ S+ K+ +F ++R E +
Sbjct: 144 YAYQLSTALAYLES---KRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMED-------ST 193
Query: 504 HIVGTKG-----YMAPEYLENGLVSTKLDVYAFGVLILEMLTGKEAAALHAEENNMHLSD 558
+ +KG +MAPE + ++ DV+ FGV + E+L +NN D
Sbjct: 194 YYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILM-HGVKPFQGVKNN----D 248
Query: 559 VLNAVLTKEDGEESLRHFIDPTLQGNYPLELALLVIRLIDACLKKDPTDRPTMYEIEHSL 618
V+ + E+GE R + P N P L L+ + C DP+ RP E++ L
Sbjct: 249 VIGRI---ENGE---RLPMPP----NCPPTLYSLMTK----CWAYDPSRRPRFTELKAQL 294
Query: 619 SNILN 623
S IL
Sbjct: 295 STILE 299
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 67/245 (27%), Positives = 109/245 (44%), Gaps = 38/245 (15%)
Query: 384 KEIALLNKINHSNLIILSGVCFNEGNCYLVYEYAVNGTLSDWVFSNKNEGKYLDWKQRIQ 443
+E + + +H +++ L GV E +++ E G L ++ K LD I
Sbjct: 65 QEALTMRQFDHPHIVKLIGV-ITENPVWIIMELCTLGELRSFLQVRKYS---LDLASLIL 120
Query: 444 IALDVATGLNYLHSFTNPPHVHKDINSSNVLLDSDLRAKIANFAMARPAEGQEGEFALTR 503
A ++T L YL S VH+DI + NVL+ S+ K+ +F ++R E +
Sbjct: 121 YAYQLSTALAYLES---KRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMED-------ST 170
Query: 504 HIVGTKG-----YMAPEYLENGLVSTKLDVYAFGVLILEMLTGKEAAALHAEENNMHLSD 558
+ +KG +MAPE + ++ DV+ FGV + E+L +NN D
Sbjct: 171 YYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILM-HGVKPFQGVKNN----D 225
Query: 559 VLNAVLTKEDGEESLRHFIDPTLQGNYPLELALLVIRLIDACLKKDPTDRPTMYEIEHSL 618
V+ + E+GE R + P N P L L+ + C DP+ RP E++ L
Sbjct: 226 VIGRI---ENGE---RLPMPP----NCPPTLYSLMTK----CWAYDPSRRPRFTELKAQL 271
Query: 619 SNILN 623
S IL
Sbjct: 272 STILE 276
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 63/253 (24%), Positives = 108/253 (42%), Gaps = 32/253 (12%)
Query: 363 VYRGKINGGFAAIKKVNGD-VSKEIALLNKINHSNLIILSGVCFNEGNCYLVYEYAVNGT 421
V+ GKI +K + +S EI++ + H +++ G + ++V E +
Sbjct: 48 VFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRS 107
Query: 422 LSDWVFSNKNEGKYLDWKQRIQIALDVATGLNYLHSFTNPPHVHKDINSSNVLLDSDLRA 481
L + +K + + R + + G YLH +H+D+ N+ L+ DL
Sbjct: 108 LLEL---HKRRKALTEPEARYYLR-QIVLGCQYLHRNRV---IHRDLKLGNLFLNEDLEV 160
Query: 482 KIANFAMARPAEGQEGEFALTRHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLILEMLTG 541
KI +F +A E +GE T + GT Y+APE L S ++DV++ G ++ +L G
Sbjct: 161 KIGDFGLATKVE-YDGERKKT--LCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVG 217
Query: 542 KEAAALHAEENNMHLSDVLNAVLTKEDGEESLRHFIDPTLQGNYPLELALLVIRLIDACL 601
K S + L + E S+ I+P + LI L
Sbjct: 218 KPP---------FETSCLKETYLRIKKNEYSIPKHINP------------VAASLIQKML 256
Query: 602 KKDPTDRPTMYEI 614
+ DPT RPT+ E+
Sbjct: 257 QTDPTARPTINEL 269
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 95/200 (47%), Gaps = 35/200 (17%)
Query: 361 GSVYRGK-INGGFAAIKKVNGDVS---------KEIALLNKINHSNLIILSGVCFNEGNC 410
G VY+ K G A+K++ D +EI+LL +++H N++ L V +E
Sbjct: 35 GVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDVIHSERCL 94
Query: 411 YLVYEYAVNGTLSDWVFSNKNEGKYLDWKQ------RIQIAL-DVATGLNYLHSFTNPPH 463
LV+E F K+ K LD + +I+I L + G+ + H
Sbjct: 95 TLVFE-----------FMEKDLKKVLDENKTGLQDSQIKIYLYQLLRGVAHCHQHRI--- 140
Query: 464 VHKDINSSNVLLDSDLRAKIANFAMARPAEGQEGEFALTRHIVGTKGYMAPEYLE-NGLV 522
+H+D+ N+L++SD K+A+F +AR + H V T Y AP+ L +
Sbjct: 141 LHRDLKPQNLLINSDGALKLADFGLARAFGIPVRSYT---HEVVTLWYRAPDVLMGSKKY 197
Query: 523 STKLDVYAFGVLILEMLTGK 542
ST +D+++ G + EM+TGK
Sbjct: 198 STSVDIWSIGCIFAEMITGK 217
>pdb|1RW8|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With Atp
Site Inhibitor
Length = 301
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 70/290 (24%), Positives = 127/290 (43%), Gaps = 40/290 (13%)
Query: 361 GSVYRGKINGGFAAIKKVNGDVSK------EIALLNKINHSNLI-ILSGVCFNEG---NC 410
G V+RGK G A+K + + EI + H N++ ++ + G
Sbjct: 18 GEVWRGKWRGEEVAVKIFSSREERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQL 77
Query: 411 YLVYEYAVNGTLSDWV--FSNKNEGKYLDWKQRIQIALDVATGLNYLH-----SFTNPPH 463
+LV +Y +G+L D++ ++ EG I++AL A+GL +LH + P
Sbjct: 78 WLVSDYHEHGSLFDYLNRYTVTVEGM-------IKLALSTASGLAHLHMEIVGTQGKPAI 130
Query: 464 VHKDINSSNVLLDSDLRAKIANFAMARPAEGQEGEFALT-RHIVGTKGYMAPEYLENGL- 521
H+D+ S N+L+ + IA+ +A + + H VGTK YMAPE L++ +
Sbjct: 131 AHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSIN 190
Query: 522 -----VSTKLDVYAFGVLILEMLTGKEAAALHAEENNMHLSDVLNAVLTKEDGEESLRHF 576
+ D+YA G++ E+ +H E+ + D+ V + EE +
Sbjct: 191 MKHFESFKRADIYAMGLVFWEIARRCSIGGIH-EDYQLPYYDL---VPSDPSVEEMRKVV 246
Query: 577 IDPTLQGNYP-----LELALLVIRLIDACLKKDPTDRPTMYEIEHSLSNI 621
+ L+ N P E ++ +++ C + R T I+ +LS +
Sbjct: 247 CEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQL 296
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 64/269 (23%), Positives = 112/269 (41%), Gaps = 45/269 (16%)
Query: 374 AIKKVNGDVSKEIALLNKINHSNLIILSGVCFNEGNCYLVYEYAVNGTLSDWVFSNKNE- 432
A + D +E AL+ + ++ N++ L GVC L++EY G L++++ S
Sbjct: 89 ASADMQADFQREAALMAEFDNPNIVKLLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHT 148
Query: 433 -------------------GKYLDWKQRIQIALDVATGLNYLHSFTNPPHVHKDINSSNV 473
L +++ IA VA G+ YL + VH+D+ + N
Sbjct: 149 VCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYL---SERKFVHRDLATRNC 205
Query: 474 LLDSDLRAKIANFAMARPAEGQEGEFALTRHIVGTKGYMAPEYLENGLVSTKLDVYAFGV 533
L+ ++ KIA+F ++R + A + + +M PE + +T+ DV+A+GV
Sbjct: 206 LVGENMVVKIADFGLSRNIYSADYYKADGNDAIPIR-WMPPESIFYNRYTTESDVWAYGV 264
Query: 534 LILEMLT-GKEAAALHAEENNMHLSDVLNAVLTKEDGEESLRHFIDPTLQGNYPLELALL 592
++ E+ + G + A E ++ N + E N PLEL
Sbjct: 265 VLWEIFSYGLQPYYGMAHEEVIYYVRDGNILACPE----------------NCPLEL--- 305
Query: 593 VIRLIDACLKKDPTDRPTMYEIEHSLSNI 621
L+ C K P DRP+ I L +
Sbjct: 306 -YNLMRLCWSKLPADRPSFCSIHRILQRM 333
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 63/254 (24%), Positives = 108/254 (42%), Gaps = 32/254 (12%)
Query: 362 SVYRGKINGGFAAIKKVNGD-VSKEIALLNKINHSNLIILSGVCFNEGNCYLVYEYAVNG 420
V+ GKI +K + +S EI++ + H +++ G + ++V E
Sbjct: 43 EVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRR 102
Query: 421 TLSDWVFSNKNEGKYLDWKQRIQIALDVATGLNYLHSFTNPPHVHKDINSSNVLLDSDLR 480
+L + +K + + R + + G YLH +H+D+ N+ L+ DL
Sbjct: 103 SLLEL---HKRRKALTEPEARYYLR-QIVLGCQYLHRNRV---IHRDLKLGNLFLNEDLE 155
Query: 481 AKIANFAMARPAEGQEGEFALTRHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLILEMLT 540
KI +F +A E +GE T + GT Y+APE L S ++DV++ G ++ +L
Sbjct: 156 VKIGDFGLATKVE-YDGERKKT--LCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLV 212
Query: 541 GKEAAALHAEENNMHLSDVLNAVLTKEDGEESLRHFIDPTLQGNYPLELALLVIRLIDAC 600
GK S + L + E S+ I+P + LI
Sbjct: 213 GKPP---------FETSCLKETYLRIKKNEYSIPKHINP------------VAASLIQKM 251
Query: 601 LKKDPTDRPTMYEI 614
L+ DPT RPT+ E+
Sbjct: 252 LQTDPTARPTINEL 265
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 41/160 (25%), Positives = 78/160 (48%), Gaps = 8/160 (5%)
Query: 382 VSKEIALLNKINHSNLIILSGVCFNEGNCYLVYEYAVNGTLSDWVFSNKNEGKYLDWKQR 441
V++E ++++++H + L ++ Y YA NG L ++ + G + + R
Sbjct: 79 VTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGCLLKYI---RKIGSFDETCTR 135
Query: 442 IQIALDVATGLNYLHSFTNPPHVHKDINSSNVLLDSDLRAKIANFAMARPAEGQEGEFAL 501
A ++ + L YLH +H+D+ N+LL+ D+ +I +F A+ E + A
Sbjct: 136 FYTA-EIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAK-VLSPESKQAR 190
Query: 502 TRHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLILEMLTG 541
VGT Y++PE L S D++A G +I +++ G
Sbjct: 191 ANSFVGTAQYVSPELLTEKSASKSSDLWALGCIIYQLVAG 230
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 61/236 (25%), Positives = 105/236 (44%), Gaps = 38/236 (16%)
Query: 321 DEESQDFLESISGVAQSLKVYS-FKEL-QSATDNFSFTCRIQGSVYRGK--INGGFAAIK 376
DEE + L SI V K Y+ F+++ Q A+ G+VY G AI+
Sbjct: 2 DEEILEKLRSIVSVGDPKKKYTRFEKIGQGAS----------GTVYTAMDVATGQEVAIR 51
Query: 377 KVNGD-------VSKEIALLNKINHSNLIILSGVCFNEGNCYLVYEYAVNGTLSDWVFSN 429
++N + EI ++ + + N++ ++V EY G+L+D V
Sbjct: 52 QMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTET 111
Query: 430 KNEGKYLDWKQRIQIALDVATGLNYLHSFTNPPHVHKDINSSNVLLDSDLRAKIANF--- 486
+D Q + + L +LHS +H+DI S N+LL D K+ +F
Sbjct: 112 -----CMDEGQIAAVCRECLQALEFLHSNQ---VIHRDIKSDNILLGMDGSVKLTDFGFC 163
Query: 487 AMARPAEGQEGEFALTRHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLILEMLTGK 542
A P + + E +VGT +MAPE + K+D+++ G++ +EM+ G+
Sbjct: 164 AQITPEQSKRSE------MVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGE 213
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 63/254 (24%), Positives = 108/254 (42%), Gaps = 32/254 (12%)
Query: 362 SVYRGKINGGFAAIKKVNGD-VSKEIALLNKINHSNLIILSGVCFNEGNCYLVYEYAVNG 420
V+ GKI +K + +S EI++ + H +++ G + ++V E
Sbjct: 43 EVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRR 102
Query: 421 TLSDWVFSNKNEGKYLDWKQRIQIALDVATGLNYLHSFTNPPHVHKDINSSNVLLDSDLR 480
+L + +K + + R + + G YLH +H+D+ N+ L+ DL
Sbjct: 103 SLLEL---HKRRKALTEPEARYYLR-QIVLGCQYLHRNRV---IHRDLKLGNLFLNEDLE 155
Query: 481 AKIANFAMARPAEGQEGEFALTRHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLILEMLT 540
KI +F +A E +GE T + GT Y+APE L S ++DV++ G ++ +L
Sbjct: 156 VKIGDFGLATKVE-YDGERKKT--LCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLV 212
Query: 541 GKEAAALHAEENNMHLSDVLNAVLTKEDGEESLRHFIDPTLQGNYPLELALLVIRLIDAC 600
GK S + L + E S+ I+P + LI
Sbjct: 213 GKPP---------FETSCLKETYLRIKKNEYSIPKHINP------------VAASLIQKM 251
Query: 601 LKKDPTDRPTMYEI 614
L+ DPT RPT+ E+
Sbjct: 252 LQTDPTARPTINEL 265
>pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
pdb|3G2F|B Chain B, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
Length = 336
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 95/212 (44%), Gaps = 42/212 (19%)
Query: 361 GSVYRGKINGGFAAIKK---------VNGDVSKEIALLNKINHSNLIILSGVCFNEGNC- 410
G+VY+G ++ A+K +N + L+ N + I+ +G
Sbjct: 27 GAVYKGSLDERPVAVKVFSFANRQNFINEKNIYRVPLMEHDNIARFIVGDERVTADGRME 86
Query: 411 -YLVYEYAVNGTLSDWVFSNKNEGKYLDWKQRIQIALDVATGLNYLHS------FTNPPH 463
LV EY NG+L ++ + + DW ++A V GL YLH+ P
Sbjct: 87 YLLVMEYYPNGSLXKYLSLHTS-----DWVSSCRLAHSVTRGLAYLHTELPRGDHYKPAI 141
Query: 464 VHKDINSSNVLLDSDLRAKIANFAMA---------RPAEGQEGEFALTRHIVGTKGYMAP 514
H+D+NS NVL+ +D I++F ++ RP G+E A++ VGT YMAP
Sbjct: 142 SHRDLNSRNVLVKNDGTCVISDFGLSMRLTGNRLVRP--GEEDNAAISE--VGTIRYMAP 197
Query: 515 EYLENGL-------VSTKLDVYAFGVLILEML 539
E LE + ++D+YA G++ E+
Sbjct: 198 EVLEGAVNLRDXESALKQVDMYALGLIYWEIF 229
>pdb|3KMW|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mgatp)
pdb|3REP|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mnatp)
Length = 271
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 61/271 (22%), Positives = 118/271 (43%), Gaps = 60/271 (22%)
Query: 361 GSVYRGKINGGFAAIK---------KVNGDVSKEIALLNKINHSNLIILSGVCFNEGNCY 411
G +++G+ G +K + + D ++E L +H N++ + G C + +
Sbjct: 24 GELWKGRWQGNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQSPPAPH 83
Query: 412 --LVYEYAVNGTLSDWVFSNKNEGK--YLDWKQRIQIALDVATGLNYLHSFTN--PPHVH 465
L+ + G+L ++ +EG +D Q ++ ALD+A G+ +LH+ P H
Sbjct: 84 PTLITHWMPYGSL----YNVLHEGTNFVVDQSQAVKFALDMARGMAFLHTLEPLIPRHA- 138
Query: 466 KDINSSNVLLDSDLRAKIA----NFAMARPAEGQEGEFALTRHIVGTKGYMAPEYLENGL 521
+NS +V++D D+ A+I+ F+ P + ++APE L+
Sbjct: 139 --LNSRSVMIDEDMTARISMADVKFSFQSPGR------------MYAPAWVAPEALQKKP 184
Query: 522 VST---KLDVYAFGVLILEMLTGKEAAALHAEENNMHLSDVLNAVLTKEDGEESLRHFID 578
T D+++F VL+ E++T + +D+ N + + E LR I
Sbjct: 185 EDTNRRSADMWSFAVLLWELVT-----------REVPFADLSNMEIGMKVALEGLRPTIP 233
Query: 579 PTLQGNYPLELALLVIRLIDACLKKDPTDRP 609
P + + V +L+ C+ +DP RP
Sbjct: 234 PGISPH--------VSKLMKICMNEDPAKRP 256
>pdb|3TZM|A Chain A, Tgf-Beta Receptor Type 1 In Complex With Sb431542
Length = 309
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 70/290 (24%), Positives = 127/290 (43%), Gaps = 40/290 (13%)
Query: 361 GSVYRGKINGGFAAIKKVNGDVSK------EIALLNKINHSNLI-ILSGVCFNEG---NC 410
G V+RGK G A+K + + EI + H N++ ++ + G
Sbjct: 23 GEVWRGKWRGEEVAVKIFSSREERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQL 82
Query: 411 YLVYEYAVNGTLSDWV--FSNKNEGKYLDWKQRIQIALDVATGLNYLH-----SFTNPPH 463
+LV +Y +G+L D++ ++ EG I++AL A+GL +LH + P
Sbjct: 83 WLVSDYHEHGSLFDYLNRYTVTVEGM-------IKLALSTASGLAHLHMEIVGTQGKPAI 135
Query: 464 VHKDINSSNVLLDSDLRAKIANFAMARPAEGQEGEFALT-RHIVGTKGYMAPEYLENGL- 521
H+D+ S N+L+ + IA+ +A + + H VGTK YMAPE L++ +
Sbjct: 136 AHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSIN 195
Query: 522 -----VSTKLDVYAFGVLILEMLTGKEAAALHAEENNMHLSDVLNAVLTKEDGEESLRHF 576
+ D+YA G++ E+ +H E+ + D+ V + EE +
Sbjct: 196 MKHFESFKRADIYAMGLVFWEIARRCSIGGIH-EDYQLPYYDL---VPSDPSVEEMRKVV 251
Query: 577 IDPTLQGNYP-----LELALLVIRLIDACLKKDPTDRPTMYEIEHSLSNI 621
+ L+ N P E ++ +++ C + R T I+ +LS +
Sbjct: 252 CEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQL 301
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 67/245 (27%), Positives = 109/245 (44%), Gaps = 38/245 (15%)
Query: 384 KEIALLNKINHSNLIILSGVCFNEGNCYLVYEYAVNGTLSDWVFSNKNEGKYLDWKQRIQ 443
+E + + +H +++ L GV E +++ E G L ++ K LD I
Sbjct: 63 QEALTMRQFDHPHIVKLIGV-ITENPVWIIMELCTLGELRSFLQVRKYS---LDLASLIL 118
Query: 444 IALDVATGLNYLHSFTNPPHVHKDINSSNVLLDSDLRAKIANFAMARPAEGQEGEFALTR 503
A ++T L YL S VH+DI + NVL+ S+ K+ +F ++R E +
Sbjct: 119 YAYQLSTALAYLES---KRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMED-------ST 168
Query: 504 HIVGTKG-----YMAPEYLENGLVSTKLDVYAFGVLILEMLTGKEAAALHAEENNMHLSD 558
+ +KG +MAPE + ++ DV+ FGV + E+L +NN D
Sbjct: 169 YYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILM-HGVKPFQGVKNN----D 223
Query: 559 VLNAVLTKEDGEESLRHFIDPTLQGNYPLELALLVIRLIDACLKKDPTDRPTMYEIEHSL 618
V+ + E+GE R + P N P L L+ + C DP+ RP E++ L
Sbjct: 224 VIGRI---ENGE---RLPMPP----NCPPTLYSLMTK----CWAYDPSRRPRFTELKAQL 269
Query: 619 SNILN 623
S IL
Sbjct: 270 STILE 274
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 80/171 (46%), Gaps = 14/171 (8%)
Query: 374 AIKKVNGDVSKEIALLNKINHSNLIILSGVCFNEGNCYLVYEYAVNGTLSDWVFSNKNEG 433
A+K + EIA+L KI H N++ L + + + YLV + G L D + +G
Sbjct: 59 ALKGKESSIENEIAVLRKIKHENIVALEDIYESPNHLYLVMQLVSGGELFDRIV---EKG 115
Query: 434 KYLDWKQRIQIALDVATGLNYLHSFTNPPHVHKDINSSNVLL---DSDLRAKIANFAMAR 490
Y + K + V + YLH VH+D+ N+L D + + I++F +++
Sbjct: 116 FYTE-KDASTLIRQVLDAVYYLHRMGI---VHRDLKPENLLYYSQDEESKIMISDFGLSK 171
Query: 491 PAEGQEGEFALTRHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLILEMLTG 541
EG+ + GT GY+APE L S +D ++ GV+ +L G
Sbjct: 172 ----MEGKGDVMSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCG 218
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 79/162 (48%), Gaps = 20/162 (12%)
Query: 385 EIALLNKINHSNLIILSGVCFNEGNCYLVYEYAVNGTL-----SDWVFSNKNEGKYLDWK 439
E +L ++NH ++ L EG YL+ ++ G L + +F+ ++ YL
Sbjct: 76 ERDILVEVNHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYL--- 132
Query: 440 QRIQIALDVATGLNYLHSFTNPPHVHKDINSSNVLLDSDLRAKIANFAMARPAEGQEGEF 499
++A L++LHS +++D+ N+LLD + K+ +F +++ + E +
Sbjct: 133 ------AELALALDHLHSLGI---IYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKK- 182
Query: 500 ALTRHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLILEMLTG 541
GT YMAPE + + D ++FGVL+ EMLTG
Sbjct: 183 --AYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTG 222
>pdb|1VJY|A Chain A, Crystal Structure Of A Naphthyridine Inhibitor Of Human
Tgf- Beta Type I Receptor
pdb|3GXL|A Chain A, Alk-5 Kinase Complex With Gw857175
pdb|3HMM|A Chain A, Structure Of Alk5 + Gw855857
Length = 303
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 70/290 (24%), Positives = 127/290 (43%), Gaps = 40/290 (13%)
Query: 361 GSVYRGKINGGFAAIKKVNGDVSK------EIALLNKINHSNLI-ILSGVCFNEG---NC 410
G V+RGK G A+K + + EI + H N++ ++ + G
Sbjct: 17 GEVWRGKWRGEEVAVKIFSSREERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQL 76
Query: 411 YLVYEYAVNGTLSDWV--FSNKNEGKYLDWKQRIQIALDVATGLNYLH-----SFTNPPH 463
+LV +Y +G+L D++ ++ EG I++AL A+GL +LH + P
Sbjct: 77 WLVSDYHEHGSLFDYLNRYTVTVEGM-------IKLALSTASGLAHLHMEIVGTQGKPAI 129
Query: 464 VHKDINSSNVLLDSDLRAKIANFAMARPAEGQEGEFALT-RHIVGTKGYMAPEYLENGL- 521
H+D+ S N+L+ + IA+ +A + + H VGTK YMAPE L++ +
Sbjct: 130 AHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSIN 189
Query: 522 -----VSTKLDVYAFGVLILEMLTGKEAAALHAEENNMHLSDVLNAVLTKEDGEESLRHF 576
+ D+YA G++ E+ +H E+ + D+ V + EE +
Sbjct: 190 MKHFESFKRADIYAMGLVFWEIARRCSIGGIH-EDYQLPYYDL---VPSDPSVEEMRKVV 245
Query: 577 IDPTLQGNYP-----LELALLVIRLIDACLKKDPTDRPTMYEIEHSLSNI 621
+ L+ N P E ++ +++ C + R T I+ +LS +
Sbjct: 246 CEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQL 295
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 79/162 (48%), Gaps = 20/162 (12%)
Query: 385 EIALLNKINHSNLIILSGVCFNEGNCYLVYEYAVNGTL-----SDWVFSNKNEGKYLDWK 439
E +L ++NH ++ L EG YL+ ++ G L + +F+ ++ YL
Sbjct: 77 ERDILVEVNHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYL--- 133
Query: 440 QRIQIALDVATGLNYLHSFTNPPHVHKDINSSNVLLDSDLRAKIANFAMARPAEGQEGEF 499
++A L++LHS +++D+ N+LLD + K+ +F +++ + E +
Sbjct: 134 ------AELALALDHLHSLGI---IYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKK- 183
Query: 500 ALTRHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLILEMLTG 541
GT YMAPE + + D ++FGVL+ EMLTG
Sbjct: 184 --AYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTG 223
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 67/245 (27%), Positives = 109/245 (44%), Gaps = 38/245 (15%)
Query: 384 KEIALLNKINHSNLIILSGVCFNEGNCYLVYEYAVNGTLSDWVFSNKNEGKYLDWKQRIQ 443
+E + + +H +++ L GV E +++ E G L ++ K LD I
Sbjct: 60 QEALTMRQFDHPHIVKLIGV-ITENPVWIIMELCTLGELRSFLQVRKYS---LDLASLIL 115
Query: 444 IALDVATGLNYLHSFTNPPHVHKDINSSNVLLDSDLRAKIANFAMARPAEGQEGEFALTR 503
A ++T L YL S VH+DI + NVL+ S+ K+ +F ++R E +
Sbjct: 116 YAYQLSTALAYLES---KRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMED-------ST 165
Query: 504 HIVGTKG-----YMAPEYLENGLVSTKLDVYAFGVLILEMLTGKEAAALHAEENNMHLSD 558
+ +KG +MAPE + ++ DV+ FGV + E+L +NN D
Sbjct: 166 YYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILM-HGVKPFQGVKNN----D 220
Query: 559 VLNAVLTKEDGEESLRHFIDPTLQGNYPLELALLVIRLIDACLKKDPTDRPTMYEIEHSL 618
V+ + E+GE R + P N P L L+ + C DP+ RP E++ L
Sbjct: 221 VIGRI---ENGE---RLPMPP----NCPPTLYSLMTK----CWAYDPSRRPRFTELKAQL 266
Query: 619 SNILN 623
S IL
Sbjct: 267 STILE 271
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 67/245 (27%), Positives = 109/245 (44%), Gaps = 38/245 (15%)
Query: 384 KEIALLNKINHSNLIILSGVCFNEGNCYLVYEYAVNGTLSDWVFSNKNEGKYLDWKQRIQ 443
+E + + +H +++ L GV E +++ E G L ++ K LD I
Sbjct: 62 QEALTMRQFDHPHIVKLIGV-ITENPVWIIMELCTLGELRSFLQVRKYS---LDLASLIL 117
Query: 444 IALDVATGLNYLHSFTNPPHVHKDINSSNVLLDSDLRAKIANFAMARPAEGQEGEFALTR 503
A ++T L YL S VH+DI + NVL+ S+ K+ +F ++R E +
Sbjct: 118 YAYQLSTALAYLESKR---FVHRDIAARNVLVSSNDCVKLGDFGLSRYMED-------ST 167
Query: 504 HIVGTKG-----YMAPEYLENGLVSTKLDVYAFGVLILEMLTGKEAAALHAEENNMHLSD 558
+ +KG +MAPE + ++ DV+ FGV + E+L +NN D
Sbjct: 168 YYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHG-VKPFQGVKNN----D 222
Query: 559 VLNAVLTKEDGEESLRHFIDPTLQGNYPLELALLVIRLIDACLKKDPTDRPTMYEIEHSL 618
V+ + E+GE R + P N P L L+ + C DP+ RP E++ L
Sbjct: 223 VIGRI---ENGE---RLPMPP----NCPPTLYSLMTK----CWAYDPSRRPRFTELKAQL 268
Query: 619 SNILN 623
S IL
Sbjct: 269 STILE 273
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 67/245 (27%), Positives = 109/245 (44%), Gaps = 38/245 (15%)
Query: 384 KEIALLNKINHSNLIILSGVCFNEGNCYLVYEYAVNGTLSDWVFSNKNEGKYLDWKQRIQ 443
+E + + +H +++ L GV E +++ E G L ++ K LD I
Sbjct: 60 QEALTMRQFDHPHIVKLIGV-ITENPVWIIMELCTLGELRSFLQVRKYS---LDLASLIL 115
Query: 444 IALDVATGLNYLHSFTNPPHVHKDINSSNVLLDSDLRAKIANFAMARPAEGQEGEFALTR 503
A ++T L YL S VH+DI + NVL+ S+ K+ +F ++R E +
Sbjct: 116 YAYQLSTALAYLESKR---FVHRDIAARNVLVSSNDCVKLGDFGLSRYMED-------ST 165
Query: 504 HIVGTKG-----YMAPEYLENGLVSTKLDVYAFGVLILEMLTGKEAAALHAEENNMHLSD 558
+ +KG +MAPE + ++ DV+ FGV + E+L +NN D
Sbjct: 166 YYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHG-VKPFQGVKNN----D 220
Query: 559 VLNAVLTKEDGEESLRHFIDPTLQGNYPLELALLVIRLIDACLKKDPTDRPTMYEIEHSL 618
V+ + E+GE R + P N P L L+ + C DP+ RP E++ L
Sbjct: 221 VIGRI---ENGE---RLPMPP----NCPPTLYSLMTK----CWAYDPSRRPRFTELKAQL 266
Query: 619 SNILN 623
S IL
Sbjct: 267 STILE 271
>pdb|2WOT|A Chain A, Alk5 In Complex With 4-((5,6-Dimethyl-2-(2-Pyridyl)-3-
Pyridyl)oxy)-N-(3,4,5-Trimethoxyphenyl)pyridin-2-Amine
pdb|2WOU|A Chain A, Alk5 In Complex With
4-((4-((2,6-Dimethyl-3-Pyridyl)oxy)-2-
Pyridyl)amino)benzenesulfonamide
Length = 306
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 70/290 (24%), Positives = 127/290 (43%), Gaps = 40/290 (13%)
Query: 361 GSVYRGKINGGFAAIKKVNGDVSK------EIALLNKINHSNLI-ILSGVCFNEG---NC 410
G V+RGK G A+K + + EI + H N++ ++ + G
Sbjct: 20 GEVWRGKWRGEEVAVKIFSSREERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQL 79
Query: 411 YLVYEYAVNGTLSDWV--FSNKNEGKYLDWKQRIQIALDVATGLNYLH-----SFTNPPH 463
+LV +Y +G+L D++ ++ EG I++AL A+GL +LH + P
Sbjct: 80 WLVSDYHEHGSLFDYLNRYTVTVEGM-------IKLALSTASGLAHLHMEIVGTQGKPAI 132
Query: 464 VHKDINSSNVLLDSDLRAKIANFAMARPAEGQEGEFALT-RHIVGTKGYMAPEYLENGL- 521
H+D+ S N+L+ + IA+ +A + + H VGTK YMAPE L++ +
Sbjct: 133 AHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSIN 192
Query: 522 -----VSTKLDVYAFGVLILEMLTGKEAAALHAEENNMHLSDVLNAVLTKEDGEESLRHF 576
+ D+YA G++ E+ +H E+ + D+ V + EE +
Sbjct: 193 MKHFESFKRADIYAMGLVFWEIARRCSIGGIH-EDYQLPYYDL---VPSDPSVEEMRKVV 248
Query: 577 IDPTLQGNYP-----LELALLVIRLIDACLKKDPTDRPTMYEIEHSLSNI 621
+ L+ N P E ++ +++ C + R T I+ +LS +
Sbjct: 249 CEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQL 298
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 55/230 (23%), Positives = 105/230 (45%), Gaps = 32/230 (13%)
Query: 393 NHSNLIILSGVCFNEGNCYLVYEYAVNGTLSDWVFS------NKNEGKYLDWKQRIQIAL 446
H N++ L G C + G ++ EY G L +++ +K +G+ L+ + + +
Sbjct: 100 QHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLELRDLLHFSS 159
Query: 447 DVATGLNYLHSFTNPPHVHKDINSSNVLLDSDLRAKIANFAMARPAEGQEGEFALTRHIV 506
VA G+ +L S +H+D+ + NVLL + AKI +F +AR +
Sbjct: 160 QVAQGMAFLASKNC---IHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARL 216
Query: 507 GTKGYMAPEYLENGLVSTKLDVYAFGVLILEMLTGKEAAALHAEENNMHLSDVLNAVLTK 566
K +MAPE + + + + + DV+++G+L+ E+ + L N + ++N+ K
Sbjct: 217 PVK-WMAPESIFDCVYTVQSDVWSYGILLWEIFS----LGL-----NPYPGILVNSKFYK 266
Query: 567 --EDGEESLRHFIDPTLQGNYPLELALLVIRLIDACLKKDPTDRPTMYEI 614
+DG + + P + ++ AC +PT RPT +I
Sbjct: 267 LVKDGYQMAQPAFAPK-----------NIYSIMQACWALEPTHRPTFQQI 305
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 67/245 (27%), Positives = 109/245 (44%), Gaps = 38/245 (15%)
Query: 384 KEIALLNKINHSNLIILSGVCFNEGNCYLVYEYAVNGTLSDWVFSNKNEGKYLDWKQRIQ 443
+E + + +H +++ L GV E +++ E G L ++ K LD I
Sbjct: 57 QEALTMRQFDHPHIVKLIGV-ITENPVWIIMELCTLGELRSFLQVRKYS---LDLASLIL 112
Query: 444 IALDVATGLNYLHSFTNPPHVHKDINSSNVLLDSDLRAKIANFAMARPAEGQEGEFALTR 503
A ++T L YL S VH+DI + NVL+ S+ K+ +F ++R E +
Sbjct: 113 YAYQLSTALAYLESKR---FVHRDIAARNVLVSSNDCVKLGDFGLSRYMED-------ST 162
Query: 504 HIVGTKG-----YMAPEYLENGLVSTKLDVYAFGVLILEMLTGKEAAALHAEENNMHLSD 558
+ +KG +MAPE + ++ DV+ FGV + E+L +NN D
Sbjct: 163 YYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHG-VKPFQGVKNN----D 217
Query: 559 VLNAVLTKEDGEESLRHFIDPTLQGNYPLELALLVIRLIDACLKKDPTDRPTMYEIEHSL 618
V+ + E+GE R + P N P L L+ + C DP+ RP E++ L
Sbjct: 218 VIGRI---ENGE---RLPMPP----NCPPTLYSLMTK----CWAYDPSRRPRFTELKAQL 263
Query: 619 SNILN 623
S IL
Sbjct: 264 STILE 268
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 80/163 (49%), Gaps = 20/163 (12%)
Query: 384 KEIALLNKINHSNLIILSGVCFNEGNCYLVYEYAVNGTLSDWVFSNKNEGKYLDWKQRIQ 443
+E+ + +NH N++ L V E YLV EYA G + D++ ++ G+ + + R +
Sbjct: 62 REVRIXKVLNHPNIVKLFEVIETEKTLYLVXEYASGGEVFDYLVAH---GRXKEKEARAK 118
Query: 444 IALDVATGLNYLH-SFTNPPHVHKDINSSNVLLDSDLRAKIANFAMARPAEGQEGEFALT 502
+ + + Y H F VH+D+ + N+LLD+D KIA+F + EF
Sbjct: 119 FR-QIVSAVQYCHQKFI----VHRDLKAENLLLDADXNIKIADFGFS-------NEFTFG 166
Query: 503 RHI---VGTKGYMAPEYLENGLVS-TKLDVYAFGVLILEMLTG 541
+ G Y APE + ++DV++ GV++ +++G
Sbjct: 167 NKLDAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSG 209
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 68/271 (25%), Positives = 119/271 (43%), Gaps = 52/271 (19%)
Query: 317 NKKFDEESQDFLESISGVAQSLKVY-SFKELQS------ATDNFSFTCRIQGSVYRGKIN 369
K+F ESQ + ++G + + Y F+E + +N F ++ GS GK+
Sbjct: 4 KKQFRYESQLQMVQVTGSSDNEYFYVDFREYEYDLKWEFPRENLEFG-KVLGSGAFGKVM 62
Query: 370 GGFA------------AIK--KVNGDVSKEIALLNKI-------NHSNLIILSGVCFNEG 408
A A+K K D S+ AL++++ +H N++ L G C G
Sbjct: 63 NATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHENIVNLLGACTLSG 122
Query: 409 NCYLVYEYAVNGTLSDWVFSNK-----NEGKY--------------LDWKQRIQIALDVA 449
YL++EY G L +++ S + +E +Y L ++ + A VA
Sbjct: 123 PIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVA 182
Query: 450 TGLNYLHSFTNPPHVHKDINSSNVLLDSDLRAKIANFAMARPAEGQEGEFALTRHIVGTK 509
G+ +L VH+D+ + NVL+ KI +F +AR + K
Sbjct: 183 KGMEFLEF---KSCVHRDLAARNVLVTHGKVVKICDFGLARDIMSDSNYVVRGNARLPVK 239
Query: 510 GYMAPEYLENGLVSTKLDVYAFGVLILEMLT 540
+MAPE L G+ + K DV+++G+L+ E+ +
Sbjct: 240 -WMAPESLFEGIYTIKSDVWSYGILLWEIFS 269
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 55/230 (23%), Positives = 105/230 (45%), Gaps = 32/230 (13%)
Query: 393 NHSNLIILSGVCFNEGNCYLVYEYAVNGTLSDWVFS------NKNEGKYLDWKQRIQIAL 446
H N++ L G C + G ++ EY G L +++ +K +G+ L+ + + +
Sbjct: 108 QHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLELRDLLHFSS 167
Query: 447 DVATGLNYLHSFTNPPHVHKDINSSNVLLDSDLRAKIANFAMARPAEGQEGEFALTRHIV 506
VA G+ +L S +H+D+ + NVLL + AKI +F +AR +
Sbjct: 168 QVAQGMAFLASKNC---IHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARL 224
Query: 507 GTKGYMAPEYLENGLVSTKLDVYAFGVLILEMLTGKEAAALHAEENNMHLSDVLNAVLTK 566
K +MAPE + + + + + DV+++G+L+ E+ + L N + ++N+ K
Sbjct: 225 PVK-WMAPESIFDCVYTVQSDVWSYGILLWEIFS----LGL-----NPYPGILVNSKFYK 274
Query: 567 --EDGEESLRHFIDPTLQGNYPLELALLVIRLIDACLKKDPTDRPTMYEI 614
+DG + + P + ++ AC +PT RPT +I
Sbjct: 275 LVKDGYQMAQPAFAPK-----------NIYSIMQACWALEPTHRPTFQQI 313
>pdb|3MDY|A Chain A, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
pdb|3MDY|C Chain C, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
Length = 337
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 70/287 (24%), Positives = 128/287 (44%), Gaps = 34/287 (11%)
Query: 361 GSVYRGKINGGFAAIK------KVNGDVSKEIALLNKINHSNLI-ILSGVCFNEGNC--- 410
G V+ GK G A+K + + EI + H N++ ++ G+
Sbjct: 51 GEVWMGKWRGEKVAVKVFFTTEEASWFRETEIYQTVLMRHENILGFIAADIKGTGSWTQL 110
Query: 411 YLVYEYAVNGTLSDWVFSNKNEGKYLDWKQRIQIALDVATGLNYLHS--FT---NPPHVH 465
YL+ +Y NG+L D++ S LD K +++A +GL +LH+ F+ P H
Sbjct: 111 YLITDYHENGSLYDYLKSTT-----LDAKSMLKLAYSSVSGLCHLHTEIFSTQGKPAIAH 165
Query: 466 KDINSSNVLLDSDLRAKIANFAMARPAEGQEGEFAL---TRHIVGTKGYMAPEYLENGLV 522
+D+ S N+L+ + IA+ +A E + TR VGTK YM PE L+ L
Sbjct: 166 RDLKSKNILVKKNGTCCIADLGLAVKFISDTNEVDIPPNTR--VGTKRYMPPEVLDESLN 223
Query: 523 STKL------DVYAFGVLILEMLTGKEAAALHAEENNMHLSDVLNAVLTKEDGEESL-RH 575
D+Y+FG+++ E+ + + EE + D++ + + ED E +
Sbjct: 224 RNHFQSYIMADMYSFGLILWEVARRCVSGGI-VEEYQLPYHDLVPSDPSYEDMREIVCIK 282
Query: 576 FIDPTLQGNYPLELALLVI-RLIDACLKKDPTDRPTMYEIEHSLSNI 621
+ P+ + + L + +L+ C +P R T ++ +L+ +
Sbjct: 283 KLRPSFPNRWSSDECLRQMGKLMTECWAHNPASRLTALRVKKTLAKM 329
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 73/278 (26%), Positives = 120/278 (43%), Gaps = 49/278 (17%)
Query: 361 GSVYRG--------KINGGFAAIKKVNGDVS--------KEIALLNKINHSNLIILSGVC 404
G VY G KIN A+K D + E ++ ++H +++ L G+
Sbjct: 38 GEVYEGVYTNHKGEKIN---VAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLIGI- 93
Query: 405 FNEGNCYLVYEYAVNGTLSDWVFSNKNEGKYLDWKQRIQIALDVATGLNYLHSFTNPPHV 464
E +++ E G L ++ NKN K L + +L + + YL S V
Sbjct: 94 IEEEPTWIIMELYPYGELGHYLERNKNSLKVL---TLVLYSLQICKAMAYLESINC---V 147
Query: 465 HKDINSSNVLLDSDLRAKIANFAMARPAEGQE-GEFALTRHIVGTKGYMAPEYLENGLVS 523
H+DI N+L+ S K+ +F ++R E ++ + ++TR + +M+PE + +
Sbjct: 148 HRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLPI---KWMSPESINFRRFT 204
Query: 524 TKLDVYAFGVLILEMLTGKEAAALHAEENNMHLSDVLNAVLTKEDGEESLRHFIDPTLQG 583
T DV+ F V + E+L+ + E DV+ VL K D P L
Sbjct: 205 TASDVWMFAVCMWEILSFGKQPFFWLENK-----DVI-GVLEKGD------RLPKPDLC- 251
Query: 584 NYPLELALLVIRLIDACLKKDPTDRPTMYEIEHSLSNI 621
P L L+ R C DP+DRP E+ SLS++
Sbjct: 252 --PPVLYTLMTR----CWDYDPSDRPRFTELVCSLSDV 283
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 73/278 (26%), Positives = 120/278 (43%), Gaps = 49/278 (17%)
Query: 361 GSVYRG--------KINGGFAAIKKVNGDVS--------KEIALLNKINHSNLIILSGVC 404
G VY G KIN A+K D + E ++ ++H +++ L G+
Sbjct: 26 GEVYEGVYTNHKGEKIN---VAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLIGI- 81
Query: 405 FNEGNCYLVYEYAVNGTLSDWVFSNKNEGKYLDWKQRIQIALDVATGLNYLHSFTNPPHV 464
E +++ E G L ++ NKN K L + +L + + YL S V
Sbjct: 82 IEEEPTWIIMELYPYGELGHYLERNKNSLKVL---TLVLYSLQICKAMAYLESINC---V 135
Query: 465 HKDINSSNVLLDSDLRAKIANFAMARPAEGQE-GEFALTRHIVGTKGYMAPEYLENGLVS 523
H+DI N+L+ S K+ +F ++R E ++ + ++TR + +M+PE + +
Sbjct: 136 HRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLPI---KWMSPESINFRRFT 192
Query: 524 TKLDVYAFGVLILEMLTGKEAAALHAEENNMHLSDVLNAVLTKEDGEESLRHFIDPTLQG 583
T DV+ F V + E+L+ + E DV+ VL K D P L
Sbjct: 193 TASDVWMFAVCMWEILSFGKQPFFWLENK-----DVI-GVLEKGD------RLPKPDLC- 239
Query: 584 NYPLELALLVIRLIDACLKKDPTDRPTMYEIEHSLSNI 621
P L L+ R C DP+DRP E+ SLS++
Sbjct: 240 --PPVLYTLMTR----CWDYDPSDRPRFTELVCSLSDV 271
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 68/245 (27%), Positives = 108/245 (44%), Gaps = 38/245 (15%)
Query: 384 KEIALLNKINHSNLIILSGVCFNEGNCYLVYEYAVNGTLSDWVFSNKNEGKYLDWKQRIQ 443
+E + + +H +++ L GV E +++ E G L ++ K LD I
Sbjct: 60 QEALTMRQFDHPHIVKLIGV-ITENPVWIIMELCTLGELRSFLQVRKFS---LDLASLIL 115
Query: 444 IALDVATGLNYLHSFTNPPHVHKDINSSNVLLDSDLRAKIANFAMARPAEGQEGEFALTR 503
A ++T L YL S VH+DI + NVL+ S+ K+ +F ++R E A
Sbjct: 116 YAYQLSTALAYLES---KRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTXXKA--- 169
Query: 504 HIVGTKG-----YMAPEYLENGLVSTKLDVYAFGVLILEMLTGKEAAALHAEENNMHLSD 558
+KG +MAPE + ++ DV+ FGV + E+L +NN D
Sbjct: 170 ----SKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHG-VKPFQGVKNN----D 220
Query: 559 VLNAVLTKEDGEESLRHFIDPTLQGNYPLELALLVIRLIDACLKKDPTDRPTMYEIEHSL 618
V+ + E+GE R + P N P L L+ + C DP+ RP E++ L
Sbjct: 221 VIGRI---ENGE---RLPMPP----NCPPTLYSLMTK----CWAYDPSRRPRFTELKAQL 266
Query: 619 SNILN 623
S IL
Sbjct: 267 STILE 271
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 73/278 (26%), Positives = 120/278 (43%), Gaps = 49/278 (17%)
Query: 361 GSVYRG--------KINGGFAAIKKVNGDVS--------KEIALLNKINHSNLIILSGVC 404
G VY G KIN A+K D + E ++ ++H +++ L G+
Sbjct: 22 GEVYEGVYTNHKGEKIN---VAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLIGI- 77
Query: 405 FNEGNCYLVYEYAVNGTLSDWVFSNKNEGKYLDWKQRIQIALDVATGLNYLHSFTNPPHV 464
E +++ E G L ++ NKN K L + +L + + YL S V
Sbjct: 78 IEEEPTWIIMELYPYGELGHYLERNKNSLKVL---TLVLYSLQICKAMAYLESINC---V 131
Query: 465 HKDINSSNVLLDSDLRAKIANFAMARPAEGQE-GEFALTRHIVGTKGYMAPEYLENGLVS 523
H+DI N+L+ S K+ +F ++R E ++ + ++TR + +M+PE + +
Sbjct: 132 HRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLPI---KWMSPESINFRRFT 188
Query: 524 TKLDVYAFGVLILEMLTGKEAAALHAEENNMHLSDVLNAVLTKEDGEESLRHFIDPTLQG 583
T DV+ F V + E+L+ + E DV+ VL K D P L
Sbjct: 189 TASDVWMFAVCMWEILSFGKQPFFWLENK-----DVI-GVLEKGD------RLPKPDLC- 235
Query: 584 NYPLELALLVIRLIDACLKKDPTDRPTMYEIEHSLSNI 621
P L L+ R C DP+DRP E+ SLS++
Sbjct: 236 --PPVLYTLMTR----CWDYDPSDRPRFTELVCSLSDV 267
>pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
pdb|3LCS|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 344
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/235 (22%), Positives = 94/235 (40%), Gaps = 29/235 (12%)
Query: 381 DVSKEIALLNKINHSNLIILSGVCFNEGNCYLVYEYAVNGTLSDWVFSNK---NEGKYLD 437
D E +++K NH N++ GV +++ E G L ++ + ++ L
Sbjct: 97 DFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLA 156
Query: 438 WKQRIQIALDVATGLNYLHSFTNPPHVHKDINSSNVLL---DSDLRAKIANFAMARPAEG 494
+ +A D+A G YL +H+DI + N LL AKI +F MAR
Sbjct: 157 MLDLLHVARDIACGCQYLEENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIY- 212
Query: 495 QEGEFALTRHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLILEMLTGKEAAALHAEENNM 554
+ G + + +M PE G+ ++K D ++FGVL+ E+ +
Sbjct: 213 RAGYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS-------------- 258
Query: 555 HLSDVLNAVLTKEDGEESLRHFIDPTLQGNYPLELALLVIRLIDACLKKDPTDRP 609
L + + + F+ + + P V R++ C + P DRP
Sbjct: 259 -----LGYMPYPSKSNQEVLEFVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRP 308
>pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 367
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/235 (22%), Positives = 94/235 (40%), Gaps = 29/235 (12%)
Query: 381 DVSKEIALLNKINHSNLIILSGVCFNEGNCYLVYEYAVNGTLSDWVFSNK---NEGKYLD 437
D E +++K NH N++ GV +++ E G L ++ + ++ L
Sbjct: 120 DFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLA 179
Query: 438 WKQRIQIALDVATGLNYLHSFTNPPHVHKDINSSNVLLDSD---LRAKIANFAMARPAEG 494
+ +A D+A G YL +H+DI + N LL AKI +F MAR
Sbjct: 180 MLDLLHVARDIACGCQYLEENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIY- 235
Query: 495 QEGEFALTRHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLILEMLTGKEAAALHAEENNM 554
+ G + + +M PE G+ ++K D ++FGVL+ E+ +
Sbjct: 236 RAGYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS-------------- 281
Query: 555 HLSDVLNAVLTKEDGEESLRHFIDPTLQGNYPLELALLVIRLIDACLKKDPTDRP 609
L + + + F+ + + P V R++ C + P DRP
Sbjct: 282 -----LGYMPYPSKSNQEVLEFVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRP 331
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 62/254 (24%), Positives = 108/254 (42%), Gaps = 32/254 (12%)
Query: 362 SVYRGKINGGFAAIKKVNGD-VSKEIALLNKINHSNLIILSGVCFNEGNCYLVYEYAVNG 420
V+ GKI +K + +S EI++ + H +++ G + ++V E
Sbjct: 67 EVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRR 126
Query: 421 TLSDWVFSNKNEGKYLDWKQRIQIALDVATGLNYLHSFTNPPHVHKDINSSNVLLDSDLR 480
+L + +K + + R + + G YLH +H+D+ N+ L+ DL
Sbjct: 127 SLLEL---HKRRKALTEPEARYYLR-QIVLGCQYLHRNRV---IHRDLKLGNLFLNEDLE 179
Query: 481 AKIANFAMARPAEGQEGEFALTRHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLILEMLT 540
KI +F +A E +GE + + GT Y+APE L S ++DV++ G ++ +L
Sbjct: 180 VKIGDFGLATKVE-YDGE--RKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLV 236
Query: 541 GKEAAALHAEENNMHLSDVLNAVLTKEDGEESLRHFIDPTLQGNYPLELALLVIRLIDAC 600
GK S + L + E S+ I+P + LI
Sbjct: 237 GKPP---------FETSCLKETYLRIKKNEYSIPKHINP------------VAASLIQKM 275
Query: 601 LKKDPTDRPTMYEI 614
L+ DPT RPT+ E+
Sbjct: 276 LQTDPTARPTINEL 289
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/187 (25%), Positives = 84/187 (44%), Gaps = 23/187 (12%)
Query: 365 RGKINGGFAAIKKVNGDV----------SKEIALLNKINHSNLIILSGVCFNEGNCYLVY 414
R + NG + A+K + ++ + E +L+ + H +I + G + +++
Sbjct: 26 RSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWGTFQDAQQIFMIM 85
Query: 415 EYAVNGTLSDWVFSNKNEGKYLDWKQRIQIALDVATGLNYLHSFTNPPHVHKDINSSNVL 474
+Y G L FS + + A +V L YLHS +++D+ N+L
Sbjct: 86 DYIEGGEL----FSLLRKSQRFPNPVAKFYAAEVCLALEYLHS---KDIIYRDLKPENIL 138
Query: 475 LDSDLRAKIANFAMARPAEGQEGEFALTRHIVGTKGYMAPEYLENGLVSTKLDVYAFGVL 534
LD + KI +F A+ +T + GT Y+APE + + +D ++FG+L
Sbjct: 139 LDKNGHIKITDFGFAKYVPD------VTYXLCGTPDYIAPEVVSTKPYNKSIDWWSFGIL 192
Query: 535 ILEMLTG 541
I EML G
Sbjct: 193 IYEMLAG 199
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 42/156 (26%), Positives = 80/156 (51%), Gaps = 8/156 (5%)
Query: 385 EIALLNKINHSNLIILSGVCFNEGNCYLVYEYAVNGTLSDWVFSNKNEGKYLDWKQRIQI 444
E ++ ++++ ++ + G+C E + LV E A G L+ ++ N+ ++ K I++
Sbjct: 420 EANVMQQLDNPYIVRMIGICEAE-SWMLVMEMAELGPLNKYLQQNR----HVKDKNIIEL 474
Query: 445 ALDVATGLNYLHSFTNPPHVHKDINSSNVLLDSDLRAKIANFAMARPAEGQEGEFALTRH 504
V+ G+ YL VH+D+ + NVLL + AKI++F +++ E + H
Sbjct: 475 VHQVSMGMKYLEESN---FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTH 531
Query: 505 IVGTKGYMAPEYLENGLVSTKLDVYAFGVLILEMLT 540
+ APE + S+K DV++FGVL+ E +
Sbjct: 532 GKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFS 567
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 62/254 (24%), Positives = 107/254 (42%), Gaps = 32/254 (12%)
Query: 362 SVYRGKINGGFAAIKKVNGD-VSKEIALLNKINHSNLIILSGVCFNEGNCYLVYEYAVNG 420
V+ GKI +K + +S EI++ + H +++ G + ++V E
Sbjct: 41 EVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRR 100
Query: 421 TLSDWVFSNKNEGKYLDWKQRIQIALDVATGLNYLHSFTNPPHVHKDINSSNVLLDSDLR 480
+L + +K + + R + + G YLH +H+D+ N+ L+ DL
Sbjct: 101 SLLEL---HKRRKALTEPEARYYLR-QIVLGCQYLHRNRV---IHRDLKLGNLFLNEDLE 153
Query: 481 AKIANFAMARPAEGQEGEFALTRHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLILEMLT 540
KI +F +A E +GE + + GT Y+APE L S ++DV++ G ++ +L
Sbjct: 154 VKIGDFGLATKVE-YDGE--RKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLV 210
Query: 541 GKEAAALHAEENNMHLSDVLNAVLTKEDGEESLRHFIDPTLQGNYPLELALLVIRLIDAC 600
GK S + L + E S+ I+P LI
Sbjct: 211 GKPP---------FETSCLKETYLRIKKNEYSIPKHINPVAAS------------LIQKM 249
Query: 601 LKKDPTDRPTMYEI 614
L+ DPT RPT+ E+
Sbjct: 250 LQTDPTARPTINEL 263
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/156 (26%), Positives = 80/156 (51%), Gaps = 8/156 (5%)
Query: 385 EIALLNKINHSNLIILSGVCFNEGNCYLVYEYAVNGTLSDWVFSNKNEGKYLDWKQRIQI 444
E ++ ++++ ++ + G+C E + LV E A G L+ ++ N+ ++ K I++
Sbjct: 421 EANVMQQLDNPYIVRMIGICEAE-SWMLVMEMAELGPLNKYLQQNR----HVKDKNIIEL 475
Query: 445 ALDVATGLNYLHSFTNPPHVHKDINSSNVLLDSDLRAKIANFAMARPAEGQEGEFALTRH 504
V+ G+ YL VH+D+ + NVLL + AKI++F +++ E + H
Sbjct: 476 VHQVSMGMKYLEESN---FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTH 532
Query: 505 IVGTKGYMAPEYLENGLVSTKLDVYAFGVLILEMLT 540
+ APE + S+K DV++FGVL+ E +
Sbjct: 533 GKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFS 568
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/260 (23%), Positives = 116/260 (44%), Gaps = 34/260 (13%)
Query: 367 KINGGFAAIKKVNGDVSKEIALLNKINHSNLIILSGVCFNEGNCYLVYEYAVNGTL---S 423
K N +IK D E+ ++ I + + G+ N Y++YEY N ++
Sbjct: 75 KSNNDKISIKSKYDDFKNELQIITDIKNEYCLTCEGIITNYDEVYIIYEYMENDSILKFD 134
Query: 424 DWVFS-NKNEGKYLDWKQRIQIALDVATGLNYLHSFTNPPHVHKDINSSNVLLDSDLRAK 482
++ F +KN ++ + I V +Y+H+ N H+D+ SN+L+D + R K
Sbjct: 135 EYFFVLDKNYTCFIPIQVIKCIIKSVLNSFSYIHNEKNI--CHRDVKPSNILMDKNGRVK 192
Query: 483 IANFAMARPAEGQEGEFALTRHIVGTKG---YMAPEYL--ENGLVSTKLDVYAFGVLILE 537
+++F E E+ + + I G++G +M PE+ E+ K+D+++ G+ +
Sbjct: 193 LSDFG--------ESEYMVDKKIKGSRGTYEFMPPEFFSNESSYNGAKVDIWSLGICLYV 244
Query: 538 MLTGKEAAALHAEENNMHLSDVLNAVLTKE-DGEESLRHFIDP------TLQGNYPLELA 590
M +L + L ++ N + TK + HF+ P T N+ L+
Sbjct: 245 MFYNVVPFSLK-----ISLVELFNNIRTKNIEYPLDRNHFLYPLTNKKSTCSNNF---LS 296
Query: 591 LLVIRLIDACLKKDPTDRPT 610
I + L+K+P +R T
Sbjct: 297 NEDIDFLKLFLRKNPAERIT 316
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 79/161 (49%), Gaps = 15/161 (9%)
Query: 384 KEIALLNKINHSNLIILSGVCFNEGNCYLVYEYAVNGTLSDWVFSNKNEGKYLDWKQRIQ 443
+E+ LL +++H N+ L ++G YLV E G L D + S K + +
Sbjct: 75 REVQLLKQLDHPNIXKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEV----DAAR 130
Query: 444 IALDVATGLNYLHSFTNPPHVHKDINSSNVLLDS---DLRAKIANFAMARPAEGQEGEFA 500
I V +G+ Y H VH+D+ N+LL+S D +I +F ++ E +
Sbjct: 131 IIRQVLSGITYXH---KNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKK--- 184
Query: 501 LTRHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLILEMLTG 541
+ +GT Y+APE L +G K DV++ GV++ +L+G
Sbjct: 185 -XKDKIGTAYYIAPEVL-HGTYDEKCDVWSTGVILYILLSG 223
>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/243 (22%), Positives = 95/243 (39%), Gaps = 45/243 (18%)
Query: 381 DVSKEIALLNKINHSNLIILSGVCFNEGNCYLVYEYAVNGTLSDWVFSNK---NEGKYLD 437
D E +++K+NH N++ GV +++ E G L ++ + ++ L
Sbjct: 94 DFLMEALIISKLNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLA 153
Query: 438 WKQRIQIALDVATGLNYLHSFTNPPHVHKDINSSNVLLDSD---LRAKIANFAMARPAEG 494
+ +A D+A G YL +H+DI + N LL AKI +F MAR
Sbjct: 154 MLDLLHVARDIACGCQYLEENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMAR---- 206
Query: 495 QEGEFALTRHIVGTKG--------YMAPEYLENGLVSTKLDVYAFGVLILEMLTGKEAAA 546
+ R KG +M PE G+ ++K D ++FGVL+ E+ +
Sbjct: 207 -----DIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS------ 255
Query: 547 LHAEENNMHLSDVLNAVLTKEDGEESLRHFIDPTLQGNYPLELALLVIRLIDACLKKDPT 606
L + + + F+ + + P V R++ C + P
Sbjct: 256 -------------LGYMPYPSKSNQEVLEFVTSGGRMDPPKNCPGPVYRIMTQCWQHQPE 302
Query: 607 DRP 609
DRP
Sbjct: 303 DRP 305
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 62/254 (24%), Positives = 108/254 (42%), Gaps = 32/254 (12%)
Query: 362 SVYRGKINGGFAAIKKVNGD-VSKEIALLNKINHSNLIILSGVCFNEGNCYLVYEYAVNG 420
V+ GKI +K + +S EI++ + H +++ G + ++V E
Sbjct: 65 EVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRR 124
Query: 421 TLSDWVFSNKNEGKYLDWKQRIQIALDVATGLNYLHSFTNPPHVHKDINSSNVLLDSDLR 480
+L + +K + + R + + G YLH +H+D+ N+ L+ DL
Sbjct: 125 SLLEL---HKRRKALTEPEARYYLR-QIVLGCQYLHRNRV---IHRDLKLGNLFLNEDLE 177
Query: 481 AKIANFAMARPAEGQEGEFALTRHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLILEMLT 540
KI +F +A E +GE + + GT Y+APE L S ++DV++ G ++ +L
Sbjct: 178 VKIGDFGLATKVE-YDGE--RKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLV 234
Query: 541 GKEAAALHAEENNMHLSDVLNAVLTKEDGEESLRHFIDPTLQGNYPLELALLVIRLIDAC 600
GK S + L + E S+ I+P + LI
Sbjct: 235 GKPP---------FETSCLKETYLRIKKNEYSIPKHINP------------VAASLIQKM 273
Query: 601 LKKDPTDRPTMYEI 614
L+ DPT RPT+ E+
Sbjct: 274 LQTDPTARPTINEL 287
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/164 (25%), Positives = 74/164 (45%), Gaps = 12/164 (7%)
Query: 378 VNGDVSKEIALLNKINHSNLIILSGVCFNEGNCYLVYEYAVNGTLSDWVFSNKNEGKYLD 437
V + +EI + + + H N++ + + YL+ E+A G L + + G++ D
Sbjct: 57 VEHQLRREIEIQSHLRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKEL---QKHGRF-D 112
Query: 438 WKQRIQIALDVATGLNYLHSFTNPPHVHKDINSSNVLLDSDLRAKIANFAMARPAEGQEG 497
++ ++A L+Y H +H+DI N+L+ KIA+F + A
Sbjct: 113 EQRSATFMEELADALHYCHERKV---IHRDIKPENLLMGYKGELKIADFGWSVHAPSLR- 168
Query: 498 EFALTRHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLILEMLTG 541
R + GT Y+ PE +E K+D++ GVL E L G
Sbjct: 169 ----RRXMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVG 208
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 84/166 (50%), Gaps = 17/166 (10%)
Query: 381 DVSKEIALLNKINHSNLIILSGVCFNEGNCYLVYEYAVNGTLSDWVFSNKNEGKYLDWKQ 440
D+ +E+++L +I H N+I L V N+ + L+ E G L D++ E + L ++
Sbjct: 60 DIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFL----AEKESLTEEE 115
Query: 441 RIQIALDVATGLNYLHSFTNPPHVHKDINSSNV-LLDSDL---RAKIANFAMARPAE-GQ 495
+ + G+ YLHS H D+ N+ LLD ++ R KI +F +A + G
Sbjct: 116 ATEFLKQILNGVYYLHSLQ---IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGN 172
Query: 496 EGEFALTRHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLILEMLTG 541
E ++I GT ++APE + + + D+++ GV+ +L+G
Sbjct: 173 E-----FKNIFGTPAFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/164 (25%), Positives = 74/164 (45%), Gaps = 12/164 (7%)
Query: 378 VNGDVSKEIALLNKINHSNLIILSGVCFNEGNCYLVYEYAVNGTLSDWVFSNKNEGKYLD 437
V + +EI + + + H N++ + + YL+ E+A G L + + G++ D
Sbjct: 58 VEHQLRREIEIQSHLRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKEL---QKHGRF-D 113
Query: 438 WKQRIQIALDVATGLNYLHSFTNPPHVHKDINSSNVLLDSDLRAKIANFAMARPAEGQEG 497
++ ++A L+Y H +H+DI N+L+ KIA+F + A
Sbjct: 114 EQRSATFMEELADALHYCHERKV---IHRDIKPENLLMGYKGELKIADFGWSVHAPSLR- 169
Query: 498 EFALTRHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLILEMLTG 541
R + GT Y+ PE +E K+D++ GVL E L G
Sbjct: 170 ----RRXMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVG 209
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/189 (29%), Positives = 84/189 (44%), Gaps = 22/189 (11%)
Query: 365 RGKINGGFAAIKKVNGDV---SKEIA-------LLNKINHSNLIILSGVCFNEGNCYLVY 414
R K G + A+K + +V E+A +L H L L V
Sbjct: 25 REKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVM 84
Query: 415 EYAVNGTLSDWVFSNKNEGKYLDWKQRIQIALDVATGLNYLHSFTNPPHVHKDINSSNVL 474
EYA G L F E + + + R A ++ + L YLHS V++DI N++
Sbjct: 85 EYANGGEL---FFHLSRERVFTEERARFYGA-EIVSALEYLHSRDV---VYRDIKLENLM 137
Query: 475 LDSDLRAKIANFAMARPAEG-QEGEFALTRHIVGTKGYMAPEYLENGLVSTKLDVYAFGV 533
LD D KI +F + + EG +G A + GT Y+APE LE+ +D + GV
Sbjct: 138 LDKDGHIKITDFGLCK--EGISDG--ATMKXFCGTPEYLAPEVLEDNDYGRAVDWWGLGV 193
Query: 534 LILEMLTGK 542
++ EM+ G+
Sbjct: 194 VMYEMMCGR 202
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/164 (25%), Positives = 74/164 (45%), Gaps = 12/164 (7%)
Query: 378 VNGDVSKEIALLNKINHSNLIILSGVCFNEGNCYLVYEYAVNGTLSDWVFSNKNEGKYLD 437
V + +EI + + + H N++ + + YL+ E+A G L + + G++ D
Sbjct: 57 VEHQLRREIEIQSHLRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKEL---QKHGRF-D 112
Query: 438 WKQRIQIALDVATGLNYLHSFTNPPHVHKDINSSNVLLDSDLRAKIANFAMARPAEGQEG 497
++ ++A L+Y H +H+DI N+L+ KIA+F + A
Sbjct: 113 EQRSATFMEELADALHYCHERKV---IHRDIKPENLLMGYKGELKIADFGWSVHAPSLR- 168
Query: 498 EFALTRHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLILEMLTG 541
R + GT Y+ PE +E K+D++ GVL E L G
Sbjct: 169 ----RRXMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVG 208
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 40/160 (25%), Positives = 77/160 (48%), Gaps = 8/160 (5%)
Query: 382 VSKEIALLNKINHSNLIILSGVCFNEGNCYLVYEYAVNGTLSDWVFSNKNEGKYLDWKQR 441
V++E ++++++H + L ++ Y YA NG L ++ + G + + R
Sbjct: 57 VTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYI---RKIGSFDETCTR 113
Query: 442 IQIALDVATGLNYLHSFTNPPHVHKDINSSNVLLDSDLRAKIANFAMARPAEGQEGEFAL 501
A ++ + L YLH +H+D+ N+LL+ D+ +I +F A+ E + A
Sbjct: 114 FYTA-EIVSALEYLHGKGI---IHRDLKPENILLNEDMHIQITDFGTAK-VLSPESKQAR 168
Query: 502 TRHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLILEMLTG 541
VGT Y++PE L D++A G +I +++ G
Sbjct: 169 ANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 208
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 40/160 (25%), Positives = 77/160 (48%), Gaps = 8/160 (5%)
Query: 382 VSKEIALLNKINHSNLIILSGVCFNEGNCYLVYEYAVNGTLSDWVFSNKNEGKYLDWKQR 441
V++E ++++++H + L ++ Y YA NG L ++ + G + + R
Sbjct: 80 VTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYI---RKIGSFDETCTR 136
Query: 442 IQIALDVATGLNYLHSFTNPPHVHKDINSSNVLLDSDLRAKIANFAMARPAEGQEGEFAL 501
A ++ + L YLH +H+D+ N+LL+ D+ +I +F A+ E + A
Sbjct: 137 FYTA-EIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAK-VLSPESKQAR 191
Query: 502 TRHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLILEMLTG 541
VGT Y++PE L D++A G +I +++ G
Sbjct: 192 ANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 231
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/161 (26%), Positives = 79/161 (49%), Gaps = 10/161 (6%)
Query: 382 VSKEIALLNKINHSNLIILSGVCF-NEGNCYLVYEYAVNGTLSDWVFSNKNEGKYLDWKQ 440
V++E ++++++H + L CF ++ Y YA NG L ++ + G + +
Sbjct: 84 VTRERDVMSRLDHPFFVKLY-FCFQDDEKLYFGLSYAKNGELLKYI---RKIGSFDETCT 139
Query: 441 RIQIALDVATGLNYLHSFTNPPHVHKDINSSNVLLDSDLRAKIANFAMARPAEGQEGEFA 500
R A ++ + L YLH +H+D+ N+LL+ D+ +I +F A+ E + A
Sbjct: 140 RFYTA-EIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAK-VLSPESKQA 194
Query: 501 LTRHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLILEMLTG 541
VGT Y++PE L D++A G +I +++ G
Sbjct: 195 RANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 235
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 40/160 (25%), Positives = 77/160 (48%), Gaps = 8/160 (5%)
Query: 382 VSKEIALLNKINHSNLIILSGVCFNEGNCYLVYEYAVNGTLSDWVFSNKNEGKYLDWKQR 441
V++E ++++++H + L ++ Y YA NG L ++ + G + + R
Sbjct: 77 VTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYI---RKIGSFDETCTR 133
Query: 442 IQIALDVATGLNYLHSFTNPPHVHKDINSSNVLLDSDLRAKIANFAMARPAEGQEGEFAL 501
A ++ + L YLH +H+D+ N+LL+ D+ +I +F A+ E + A
Sbjct: 134 FYTA-EIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAK-VLSPESKQAR 188
Query: 502 TRHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLILEMLTG 541
VGT Y++PE L D++A G +I +++ G
Sbjct: 189 ANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 228
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/201 (28%), Positives = 94/201 (46%), Gaps = 29/201 (14%)
Query: 361 GSVYRGK--INGGFAAIKKV---NGD------VSKEIALLNKIN---HSNLIILSGVCF- 405
G+VY+ + +G F A+K V NG+ +E+ALL ++ H N++ L VC
Sbjct: 18 GTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLEAFEHPNVVRLMDVCAT 77
Query: 406 ----NEGNCYLVYEYAVNGTLSDWVFSNKNEGKYLDWKQRIQIALDVATGLNYLHSFTNP 461
E LV+E+ V+ L ++ +K L + + GL++LH+
Sbjct: 78 SRTDREIKVTLVFEH-VDQDLRTYL--DKAPPPGLPAETIKDLMRQFLRGLDFLHANCI- 133
Query: 462 PHVHKDINSSNVLLDSDLRAKIANFAMARPAEGQEGEFALTRHIVGTKGYMAPEYLENGL 521
VH+D+ N+L+ S K+A+F +AR Q F +V T Y APE L
Sbjct: 134 --VHRDLKPENILVTSGGTVKLADFGLARIYSYQMALFP----VVVTLWYRAPEVLLQST 187
Query: 522 VSTKLDVYAFGVLILEMLTGK 542
+T +D+++ G + EM K
Sbjct: 188 YATPVDMWSVGCIFAEMFRRK 208
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/189 (29%), Positives = 84/189 (44%), Gaps = 22/189 (11%)
Query: 365 RGKINGGFAAIKKVNGDV---SKEIA-------LLNKINHSNLIILSGVCFNEGNCYLVY 414
R K G + A+K + +V E+A +L H L L V
Sbjct: 25 REKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVM 84
Query: 415 EYAVNGTLSDWVFSNKNEGKYLDWKQRIQIALDVATGLNYLHSFTNPPHVHKDINSSNVL 474
EYA G L F E + + + R A ++ + L YLHS V++DI N++
Sbjct: 85 EYANGGEL---FFHLSRERVFTEERARFYGA-EIVSALEYLHSRDV---VYRDIKLENLM 137
Query: 475 LDSDLRAKIANFAMARPAEG-QEGEFALTRHIVGTKGYMAPEYLENGLVSTKLDVYAFGV 533
LD D KI +F + + EG +G A + GT Y+APE LE+ +D + GV
Sbjct: 138 LDKDGHIKITDFGLCK--EGISDG--ATMKXFCGTPEYLAPEVLEDNDYGRAVDWWGLGV 193
Query: 534 LILEMLTGK 542
++ EM+ G+
Sbjct: 194 VMYEMMCGR 202
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 40/160 (25%), Positives = 77/160 (48%), Gaps = 8/160 (5%)
Query: 382 VSKEIALLNKINHSNLIILSGVCFNEGNCYLVYEYAVNGTLSDWVFSNKNEGKYLDWKQR 441
V++E ++++++H + L ++ Y YA NG L ++ + G + + R
Sbjct: 82 VTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYI---RKIGSFDETCTR 138
Query: 442 IQIALDVATGLNYLHSFTNPPHVHKDINSSNVLLDSDLRAKIANFAMARPAEGQEGEFAL 501
A ++ + L YLH +H+D+ N+LL+ D+ +I +F A+ E + A
Sbjct: 139 FYTA-EIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAK-VLSPESKQAR 193
Query: 502 TRHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLILEMLTG 541
VGT Y++PE L D++A G +I +++ G
Sbjct: 194 ANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 233
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 40/160 (25%), Positives = 77/160 (48%), Gaps = 8/160 (5%)
Query: 382 VSKEIALLNKINHSNLIILSGVCFNEGNCYLVYEYAVNGTLSDWVFSNKNEGKYLDWKQR 441
V++E ++++++H + L ++ Y YA NG L ++ + G + + R
Sbjct: 77 VTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYI---RKIGSFDETCTR 133
Query: 442 IQIALDVATGLNYLHSFTNPPHVHKDINSSNVLLDSDLRAKIANFAMARPAEGQEGEFAL 501
A ++ + L YLH +H+D+ N+LL+ D+ +I +F A+ E + A
Sbjct: 134 FYTA-EIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAK-VLSPESKQAR 188
Query: 502 TRHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLILEMLTG 541
VGT Y++PE L D++A G +I +++ G
Sbjct: 189 ANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 228
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 63/258 (24%), Positives = 110/258 (42%), Gaps = 44/258 (17%)
Query: 385 EIALLNKINHS-NLIILSGVCFNEGNCYLV-YEYAVNGTLSDWVFSNKNE---------- 432
E+ +L I H N++ L G C G +V E+ G LS ++ S +NE
Sbjct: 82 ELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKPEDLY 141
Query: 433 GKYLDWKQRIQIALDVATGLNYLHSFTNPPHVHKDINSSNVLLDSDLRAKIANFAMAR-- 490
+L + I + VA G+ +L S +H+D+ + N+LL KI +F +AR
Sbjct: 142 KDFLTLEHLIXYSFQVAKGMEFLASRKX---IHRDLAARNILLSEKNVVKICDFGLARDI 198
Query: 491 ---PAEGQEGEFALTRHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLILEMLTGKEAAAL 547
P ++G+ L +MAPE + + + + + DV++FGVL+ E+ + +
Sbjct: 199 XKDPDXVRKGDARLPLK------WMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYP 252
Query: 548 HAEENNMHLSDVLNAVLTKEDGEESLRHFIDPTLQGNYPLELALLVIRLIDACLKKDPTD 607
+ + EE R + T + ++D C +P+
Sbjct: 253 GVKID-----------------EEFCRRLKEGTRMRAPDYTTPEMYQTMLD-CWHGEPSQ 294
Query: 608 RPTMYEIEHSLSNILNAS 625
RPT E+ L N+L A+
Sbjct: 295 RPTFSELVEHLGNLLQAN 312
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 40/160 (25%), Positives = 77/160 (48%), Gaps = 8/160 (5%)
Query: 382 VSKEIALLNKINHSNLIILSGVCFNEGNCYLVYEYAVNGTLSDWVFSNKNEGKYLDWKQR 441
V++E ++++++H + L ++ Y YA NG L ++ + G + + R
Sbjct: 56 VTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYI---RKIGSFDETCTR 112
Query: 442 IQIALDVATGLNYLHSFTNPPHVHKDINSSNVLLDSDLRAKIANFAMARPAEGQEGEFAL 501
A ++ + L YLH +H+D+ N+LL+ D+ +I +F A+ E + A
Sbjct: 113 FYTA-EIVSALEYLHGKGI---IHRDLKPENILLNEDMHIQITDFGTAK-VLSPESKQAR 167
Query: 502 TRHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLILEMLTG 541
VGT Y++PE L D++A G +I +++ G
Sbjct: 168 ANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 207
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 40/160 (25%), Positives = 77/160 (48%), Gaps = 8/160 (5%)
Query: 382 VSKEIALLNKINHSNLIILSGVCFNEGNCYLVYEYAVNGTLSDWVFSNKNEGKYLDWKQR 441
V++E ++++++H + L ++ Y YA NG L ++ + G + + R
Sbjct: 80 VTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYI---RKIGSFDETCTR 136
Query: 442 IQIALDVATGLNYLHSFTNPPHVHKDINSSNVLLDSDLRAKIANFAMARPAEGQEGEFAL 501
A ++ + L YLH +H+D+ N+LL+ D+ +I +F A+ E + A
Sbjct: 137 FYTA-EIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAK-VLSPESKQAR 191
Query: 502 TRHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLILEMLTG 541
VGT Y++PE L D++A G +I +++ G
Sbjct: 192 ANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 231
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/165 (24%), Positives = 86/165 (52%), Gaps = 11/165 (6%)
Query: 378 VNGDVSKEIALLNKINHSNLIILSGVCFNEGNCYLVYEYAVNGTLSDWVFSNKNEGKYLD 437
+ + +E+ +L++ N ++ G +++G + E+ G+L D V E K +
Sbjct: 57 IRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSL-DQVL---KEAKRIP 112
Query: 438 WKQRIQIALDVATGLNYLHSFTNPPHVHKDINSSNVLLDSDLRAKIANFAMARPAEGQEG 497
+ ++++ V GL YL +H+D+ SN+L++S K+ +F ++ GQ
Sbjct: 113 EEILGKVSIAVLRGLAYLREKHQ--IMHRDVKPSNILVNSRGEIKLCDFGVS----GQLI 166
Query: 498 EFALTRHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLILEMLTGK 542
+ ++ VGT+ YMAPE L+ S + D+++ G+ ++E+ G+
Sbjct: 167 D-SMANSFVGTRSYMAPERLQGTHYSVQSDIWSMGLSLVELAVGR 210
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 40/160 (25%), Positives = 77/160 (48%), Gaps = 8/160 (5%)
Query: 382 VSKEIALLNKINHSNLIILSGVCFNEGNCYLVYEYAVNGTLSDWVFSNKNEGKYLDWKQR 441
V++E ++++++H + L ++ Y YA NG L ++ + G + + R
Sbjct: 79 VTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYI---RKIGSFDETCTR 135
Query: 442 IQIALDVATGLNYLHSFTNPPHVHKDINSSNVLLDSDLRAKIANFAMARPAEGQEGEFAL 501
A ++ + L YLH +H+D+ N+LL+ D+ +I +F A+ E + A
Sbjct: 136 FYTA-EIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAK-VLSPESKQAR 190
Query: 502 TRHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLILEMLTG 541
VGT Y++PE L D++A G +I +++ G
Sbjct: 191 ANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 230
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/188 (28%), Positives = 83/188 (44%), Gaps = 20/188 (10%)
Query: 365 RGKINGGFAAIKKVNGDV---SKEIA-------LLNKINHSNLIILSGVCFNEGNCYLVY 414
R K G + A+K + +V E+A +L H L L V
Sbjct: 25 REKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVM 84
Query: 415 EYAVNGTLSDWVFSNKNEGKYLDWKQRIQIALDVATGLNYLHSFTNPPHVHKDINSSNVL 474
EYA G L F E + + + R A ++ + L YLHS V++DI N++
Sbjct: 85 EYANGGEL---FFHLSRERVFTEERARFYGA-EIVSALEYLHSRDV---VYRDIKLENLM 137
Query: 475 LDSDLRAKIANFAMARPAEGQEGEFALTRHIVGTKGYMAPEYLENGLVSTKLDVYAFGVL 534
LD D KI +F + + EG + A + GT Y+APE LE+ +D + GV+
Sbjct: 138 LDKDGHIKITDFGLCK--EGI-SDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVV 194
Query: 535 ILEMLTGK 542
+ EM+ G+
Sbjct: 195 MYEMMCGR 202
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 40/160 (25%), Positives = 77/160 (48%), Gaps = 8/160 (5%)
Query: 382 VSKEIALLNKINHSNLIILSGVCFNEGNCYLVYEYAVNGTLSDWVFSNKNEGKYLDWKQR 441
V++E ++++++H + L ++ Y YA NG L ++ + G + + R
Sbjct: 55 VTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYI---RKIGSFDETCTR 111
Query: 442 IQIALDVATGLNYLHSFTNPPHVHKDINSSNVLLDSDLRAKIANFAMARPAEGQEGEFAL 501
A ++ + L YLH +H+D+ N+LL+ D+ +I +F A+ E + A
Sbjct: 112 FYTA-EIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAK-VLSPESKQAR 166
Query: 502 TRHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLILEMLTG 541
VGT Y++PE L D++A G +I +++ G
Sbjct: 167 ANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 206
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 40/160 (25%), Positives = 77/160 (48%), Gaps = 8/160 (5%)
Query: 382 VSKEIALLNKINHSNLIILSGVCFNEGNCYLVYEYAVNGTLSDWVFSNKNEGKYLDWKQR 441
V++E ++++++H + L ++ Y YA NG L ++ + G + + R
Sbjct: 54 VTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYI---RKIGSFDETCTR 110
Query: 442 IQIALDVATGLNYLHSFTNPPHVHKDINSSNVLLDSDLRAKIANFAMARPAEGQEGEFAL 501
A ++ + L YLH +H+D+ N+LL+ D+ +I +F A+ E + A
Sbjct: 111 FYTA-EIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAK-VLSPESKQAR 165
Query: 502 TRHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLILEMLTG 541
VGT Y++PE L D++A G +I +++ G
Sbjct: 166 ANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 205
>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma
Kinase Catalytic Domain
Length = 327
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 62/278 (22%), Positives = 107/278 (38%), Gaps = 60/278 (21%)
Query: 361 GSVYRGKINGGF-------AAIKKVNG--------DVSKEIALLNKINHSNLIILSGVCF 405
G VY G+++G A+K + D E +++K+NH N++ GV
Sbjct: 45 GEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKLNHQNIVRCIGVSL 104
Query: 406 NEGNCYLVYEYAVNGTLSDWVFSNK---NEGKYLDWKQRIQIALDVATGLNYLHSFTNPP 462
+++ E G L ++ + ++ L + +A D+A G YL
Sbjct: 105 QSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENH--- 161
Query: 463 HVHKDINSSNVLLDSD---LRAKIANFAMARPAEGQEGEFALTRHIVGTKG--------Y 511
+H+DI + N LL AKI +F MAR + R KG +
Sbjct: 162 FIHRDIAARNCLLTCPGPGRVAKIGDFGMAR---------DIYRASYYRKGGCAMLPVKW 212
Query: 512 MAPEYLENGLVSTKLDVYAFGVLILEMLTGKEAAALHAEENNMHLSDVLNAVLTKEDGEE 571
M PE G+ ++K D ++FGVL+ E+ + L + +
Sbjct: 213 MPPEAFMEGIFTSKTDTWSFGVLLWEIFS-------------------LGYMPYPSKSNQ 253
Query: 572 SLRHFIDPTLQGNYPLELALLVIRLIDACLKKDPTDRP 609
+ F+ + + P V R++ C + P DRP
Sbjct: 254 EVLEFVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRP 291
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 64/276 (23%), Positives = 113/276 (40%), Gaps = 38/276 (13%)
Query: 365 RGKINGGFAAIKK---------VNGDVSKEIALLNKINHSNLIILSGVCFNEGNCYLVYE 415
R + G AIKK + +EI +L ++ H NL+ L V + +LV+E
Sbjct: 23 RNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPNLVNLLEVFRRKRRLHLVFE 82
Query: 416 YAVNGTLSDWVFSNKNEGKYLDWKQRIQIALDVATGLNYLHSFTNPPHVHKDINSSNVLL 475
Y + L + + ++L I +N+ H +H+D+ N+L+
Sbjct: 83 YCDHTVLHELDRYQRGVPEHL----VKSITWQTLQAVNFCHKHNC---IHRDVKPENILI 135
Query: 476 DSDLRAKIANFAMAR----PAEGQEGEFALTRHIVGTKGYMAPEYL-ENGLVSTKLDVYA 530
K+ +F AR P++ + E V T+ Y +PE L + +DV+A
Sbjct: 136 TKHSVIKLCDFGFARLLTGPSDYYDDE-------VATRWYRSPELLVGDTQYGPPVDVWA 188
Query: 531 FGVLILEMLTGKEAAALHAEENNMHL-SDVLNAVLTKEDGEESLRHFID----PTLQGNY 585
G + E+L+G ++ + ++L L ++ + S + P +
Sbjct: 189 IGCVFAELLSGVPLWPGKSDVDQLYLIRKTLGDLIPRHQQVFSTNQYFSGVKIPDPEDME 248
Query: 586 PLELALLVIR-----LIDACLKKDPTDRPTMYEIEH 616
PLEL I L+ CL DPT+R T ++ H
Sbjct: 249 PLELKFPNISYPALGLLKGCLHMDPTERLTCEQLLH 284
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 40/160 (25%), Positives = 77/160 (48%), Gaps = 8/160 (5%)
Query: 382 VSKEIALLNKINHSNLIILSGVCFNEGNCYLVYEYAVNGTLSDWVFSNKNEGKYLDWKQR 441
V++E ++++++H + L ++ Y YA NG L ++ + G + + R
Sbjct: 79 VTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYI---RKIGSFDETCTR 135
Query: 442 IQIALDVATGLNYLHSFTNPPHVHKDINSSNVLLDSDLRAKIANFAMARPAEGQEGEFAL 501
A ++ + L YLH +H+D+ N+LL+ D+ +I +F A+ E + A
Sbjct: 136 FYTA-EIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAK-VLSPESKQAR 190
Query: 502 TRHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLILEMLTG 541
VGT Y++PE L D++A G +I +++ G
Sbjct: 191 ANXFVGTAQYVSPELLTEKSAXKSSDLWALGCIIYQLVAG 230
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 40/160 (25%), Positives = 77/160 (48%), Gaps = 8/160 (5%)
Query: 382 VSKEIALLNKINHSNLIILSGVCFNEGNCYLVYEYAVNGTLSDWVFSNKNEGKYLDWKQR 441
V++E ++++++H + L ++ Y YA NG L ++ + G + + R
Sbjct: 79 VTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYI---RKIGSFDETCTR 135
Query: 442 IQIALDVATGLNYLHSFTNPPHVHKDINSSNVLLDSDLRAKIANFAMARPAEGQEGEFAL 501
A ++ + L YLH +H+D+ N+LL+ D+ +I +F A+ E + A
Sbjct: 136 FYTA-EIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAK-VLSPESKQAR 190
Query: 502 TRHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLILEMLTG 541
VGT Y++PE L D++A G +I +++ G
Sbjct: 191 ANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 230
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 40/160 (25%), Positives = 77/160 (48%), Gaps = 8/160 (5%)
Query: 382 VSKEIALLNKINHSNLIILSGVCFNEGNCYLVYEYAVNGTLSDWVFSNKNEGKYLDWKQR 441
V++E ++++++H + L ++ Y YA NG L ++ + G + + R
Sbjct: 77 VTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYI---RKIGSFDETCTR 133
Query: 442 IQIALDVATGLNYLHSFTNPPHVHKDINSSNVLLDSDLRAKIANFAMARPAEGQEGEFAL 501
A ++ + L YLH +H+D+ N+LL+ D+ +I +F A+ E + A
Sbjct: 134 FYTA-EIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAK-VLSPESKQAR 188
Query: 502 TRHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLILEMLTG 541
VGT Y++PE L D++A G +I +++ G
Sbjct: 189 ANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 228
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/188 (28%), Positives = 83/188 (44%), Gaps = 20/188 (10%)
Query: 365 RGKINGGFAAIKKVNGDV---SKEIA-------LLNKINHSNLIILSGVCFNEGNCYLVY 414
R K G + A+K + +V E+A +L H L L V
Sbjct: 30 REKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVM 89
Query: 415 EYAVNGTLSDWVFSNKNEGKYLDWKQRIQIALDVATGLNYLHSFTNPPHVHKDINSSNVL 474
EYA G L F E + + + R A ++ + L YLHS V++DI N++
Sbjct: 90 EYANGGEL---FFHLSRERVFTEERARFYGA-EIVSALEYLHSRDV---VYRDIKLENLM 142
Query: 475 LDSDLRAKIANFAMARPAEGQEGEFALTRHIVGTKGYMAPEYLENGLVSTKLDVYAFGVL 534
LD D KI +F + + EG + A + GT Y+APE LE+ +D + GV+
Sbjct: 143 LDKDGHIKITDFGLCK--EGI-SDGATMKXFCGTPEYLAPEVLEDNDYGRAVDWWGLGVV 199
Query: 535 ILEMLTGK 542
+ EM+ G+
Sbjct: 200 MYEMMCGR 207
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/189 (29%), Positives = 84/189 (44%), Gaps = 22/189 (11%)
Query: 365 RGKINGGFAAIKKVNGDV---SKEIA-------LLNKINHSNLIILSGVCFNEGNCYLVY 414
R K G + A+K + +V E+A +L H L L V
Sbjct: 25 REKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVM 84
Query: 415 EYAVNGTLSDWVFSNKNEGKYLDWKQRIQIALDVATGLNYLHSFTNPPHVHKDINSSNVL 474
EYA G L F E + + + R A ++ + L YLHS V++DI N++
Sbjct: 85 EYANGGEL---FFHLSRERVFTEERARFYGA-EIVSALEYLHSRDV---VYRDIKLENLM 137
Query: 475 LDSDLRAKIANFAMARPAEG-QEGEFALTRHIVGTKGYMAPEYLENGLVSTKLDVYAFGV 533
LD D KI +F + + EG +G A + GT Y+APE LE+ +D + GV
Sbjct: 138 LDKDGHIKITDFGLCK--EGISDG--ATMKXFCGTPEYLAPEVLEDNDYGRAVDWWGLGV 193
Query: 534 LILEMLTGK 542
++ EM+ G+
Sbjct: 194 VMYEMMCGR 202
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 40/160 (25%), Positives = 77/160 (48%), Gaps = 8/160 (5%)
Query: 382 VSKEIALLNKINHSNLIILSGVCFNEGNCYLVYEYAVNGTLSDWVFSNKNEGKYLDWKQR 441
V++E ++++++H + L ++ Y YA NG L ++ + G + + R
Sbjct: 79 VTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYI---RKIGSFDETCTR 135
Query: 442 IQIALDVATGLNYLHSFTNPPHVHKDINSSNVLLDSDLRAKIANFAMARPAEGQEGEFAL 501
A ++ + L YLH +H+D+ N+LL+ D+ +I +F A+ E + A
Sbjct: 136 FYTA-EIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAK-VLSPESKQAR 190
Query: 502 TRHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLILEMLTG 541
VGT Y++PE L D++A G +I +++ G
Sbjct: 191 ANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 230
>pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/243 (22%), Positives = 94/243 (38%), Gaps = 45/243 (18%)
Query: 381 DVSKEIALLNKINHSNLIILSGVCFNEGNCYLVYEYAVNGTLSDWVFSNK---NEGKYLD 437
D E +++K NH N++ GV +++ E G L ++ + ++ L
Sbjct: 94 DFLMEALIISKFNHQNIVRCIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLA 153
Query: 438 WKQRIQIALDVATGLNYLHSFTNPPHVHKDINSSNVLLDSD---LRAKIANFAMARPAEG 494
+ +A D+A G YL +H+DI + N LL AKI +F MAR
Sbjct: 154 MLDLLHVARDIACGCQYLEENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMAR---- 206
Query: 495 QEGEFALTRHIVGTKG--------YMAPEYLENGLVSTKLDVYAFGVLILEMLTGKEAAA 546
+ R KG +M PE G+ ++K D ++FGVL+ E+ +
Sbjct: 207 -----DIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS------ 255
Query: 547 LHAEENNMHLSDVLNAVLTKEDGEESLRHFIDPTLQGNYPLELALLVIRLIDACLKKDPT 606
L + + + F+ + + P V R++ C + P
Sbjct: 256 -------------LGYMPYPSKSNQEVLEFVTSGGRMDPPKNCPGPVYRIMTQCWQHQPE 302
Query: 607 DRP 609
DRP
Sbjct: 303 DRP 305
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/233 (24%), Positives = 104/233 (44%), Gaps = 32/233 (13%)
Query: 321 DEESQDFLESISGVAQSLKVYS-FKEL-QSATDNFSFTCRIQGSVYRGK--INGGFAAIK 376
DEE + L SI V K Y+ F+++ Q A+ G+VY G AI+
Sbjct: 2 DEEILEKLRSIVSVGDPKKKYTRFEKIGQGAS----------GTVYTAMDVATGQEVAIR 51
Query: 377 KVNGD-------VSKEIALLNKINHSNLIILSGVCFNEGNCYLVYEYAVNGTLSDWVFSN 429
++N + EI ++ + + N++ ++V EY G+L+D V
Sbjct: 52 QMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTET 111
Query: 430 KNEGKYLDWKQRIQIALDVATGLNYLHSFTNPPHVHKDINSSNVLLDSDLRAKIANFAMA 489
+D Q + + L +LHS +H+DI S N+LL D K+ +F
Sbjct: 112 -----CMDEGQIAAVCRECLQALEFLHSNQ---VIHRDIKSDNILLGMDGSVKLTDFGFC 163
Query: 490 RPAEGQEGEFALTRHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLILEMLTGK 542
++ + + +VGT +MAPE + K+D+++ G++ +EM+ G+
Sbjct: 164 AQITPEQSKRS---XMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGE 213
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 67/244 (27%), Positives = 109/244 (44%), Gaps = 38/244 (15%)
Query: 384 KEIALLNKINHSNLIILSGVCFNEGNCYLVYEYAVNGTLSDWVFSNKNEGKYLDWKQRIQ 443
+E + + +H +++ L GV E +++ E G L ++ K LD I
Sbjct: 440 QEALTMRQFDHPHIVKLIGV-ITENPVWIIMELCTLGELRSFLQVRKFS---LDLASLIL 495
Query: 444 IALDVATGLNYLHSFTNPPHVHKDINSSNVLLDSDLRAKIANFAMARPAEGQEGEFALTR 503
A ++T L YL S VH+DI + NVL+ S+ K+ +F ++R E +
Sbjct: 496 YAYQLSTALAYLES---KRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMED-------ST 545
Query: 504 HIVGTKG-----YMAPEYLENGLVSTKLDVYAFGVLILEMLTGKEAAALHAEENNMHLSD 558
+ +KG +MAPE + ++ DV+ FGV + E+L +NN D
Sbjct: 546 YYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHG-VKPFQGVKNN----D 600
Query: 559 VLNAVLTKEDGEESLRHFIDPTLQGNYPLELALLVIRLIDACLKKDPTDRPTMYEIEHSL 618
V+ + E+GE R + P N P L L+ + C DP+ RP E++ L
Sbjct: 601 VIGRI---ENGE---RLPMPP----NCPPTLYSLMTK----CWAYDPSRRPRFTELKAQL 646
Query: 619 SNIL 622
S IL
Sbjct: 647 STIL 650
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 40/160 (25%), Positives = 77/160 (48%), Gaps = 8/160 (5%)
Query: 382 VSKEIALLNKINHSNLIILSGVCFNEGNCYLVYEYAVNGTLSDWVFSNKNEGKYLDWKQR 441
V++E ++++++H + L ++ Y YA NG L ++ + G + + R
Sbjct: 79 VTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYI---RKIGSFDETCTR 135
Query: 442 IQIALDVATGLNYLHSFTNPPHVHKDINSSNVLLDSDLRAKIANFAMARPAEGQEGEFAL 501
A ++ + L YLH +H+D+ N+LL+ D+ +I +F A+ E + A
Sbjct: 136 FYTA-EIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAK-VLSPESKQAR 190
Query: 502 TRHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLILEMLTG 541
VGT Y++PE L D++A G +I +++ G
Sbjct: 191 ANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 230
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 76/158 (48%), Gaps = 15/158 (9%)
Query: 385 EIALLNKINHSNLIILSGVCFNEGNCYLVYEYAVNGTLSDWVFSN-KNEGKYLDWKQRIQ 443
E +L +N L+ L + N Y+V EYA G + FS+ + G++ + R
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEM----FSHLRRIGRFXEPHARFY 146
Query: 444 IALDVATGLNYLHSFTNPPHVHKDINSSNVLLDSDLRAKIANFAMARPAEGQEGEFALTR 503
A V T YLHS +++D+ N+++D K+ +F A+ +G+ T
Sbjct: 147 AAQIVLT-FEYLHSLD---LIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGR------TW 196
Query: 504 HIVGTKGYMAPEYLENGLVSTKLDVYAFGVLILEMLTG 541
+ GT Y+APE + + + +D +A GVLI EM G
Sbjct: 197 XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/240 (22%), Positives = 118/240 (49%), Gaps = 32/240 (13%)
Query: 378 VNGDVSKEIALLNKINHSNLIILSGVCFNEGNCYLVYEYAVNGTLSDWVFSNKNEGKYLD 437
+ + +E+ +L++ N ++ G +++G + E+ G+L D V K G+
Sbjct: 66 IRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSL-DQVL--KKAGRI-- 120
Query: 438 WKQRI--QIALDVATGLNYLHSFTNPPHVHKDINSSNVLLDSDLRAKIANFAMARPAEGQ 495
++I ++++ V GL YL +H+D+ SN+L++S K+ +F ++ GQ
Sbjct: 121 -PEQILGKVSIAVIKGLTYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVS----GQ 173
Query: 496 EGEFALTRHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLILEMLTGKEAAALHAEENNMH 555
+ ++ VGT+ YM+PE L+ S + D+++ G+ ++EM G+ + + +M
Sbjct: 174 LID-SMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGR--YPIGSGSGSMA 230
Query: 556 LSDVLNAVLTKEDGEESLRHFIDPTL-QGNYPLELALLVIRLIDACLKKDPTDRPTMYEI 614
+ ++L+ ++ + P L G + LE ++ CL K+P +R + ++
Sbjct: 231 IFELLDYIVNEP----------PPKLPSGVFSLEFQ----DFVNKCLIKNPAERADLKQL 276
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 40/160 (25%), Positives = 77/160 (48%), Gaps = 8/160 (5%)
Query: 382 VSKEIALLNKINHSNLIILSGVCFNEGNCYLVYEYAVNGTLSDWVFSNKNEGKYLDWKQR 441
V++E ++++++H + L ++ Y YA NG L ++ + G + + R
Sbjct: 61 VTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYI---RKIGSFDETCTR 117
Query: 442 IQIALDVATGLNYLHSFTNPPHVHKDINSSNVLLDSDLRAKIANFAMARPAEGQEGEFAL 501
A ++ + L YLH +H+D+ N+LL+ D+ +I +F A+ E + A
Sbjct: 118 FYTA-EIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAK-VLSPESKQAR 172
Query: 502 TRHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLILEMLTG 541
VGT Y++PE L D++A G +I +++ G
Sbjct: 173 ANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 212
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 40/160 (25%), Positives = 77/160 (48%), Gaps = 8/160 (5%)
Query: 382 VSKEIALLNKINHSNLIILSGVCFNEGNCYLVYEYAVNGTLSDWVFSNKNEGKYLDWKQR 441
V++E ++++++H + L ++ Y YA NG L ++ + G + + R
Sbjct: 77 VTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYI---RKIGSFDETCTR 133
Query: 442 IQIALDVATGLNYLHSFTNPPHVHKDINSSNVLLDSDLRAKIANFAMARPAEGQEGEFAL 501
A ++ + L YLH +H+D+ N+LL+ D+ +I +F A+ E + A
Sbjct: 134 FYTA-EIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAK-VLSPESKQAR 188
Query: 502 TRHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLILEMLTG 541
VGT Y++PE L D++A G +I +++ G
Sbjct: 189 ANAFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 228
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/233 (24%), Positives = 104/233 (44%), Gaps = 32/233 (13%)
Query: 321 DEESQDFLESISGVAQSLKVYS-FKEL-QSATDNFSFTCRIQGSVYRGK--INGGFAAIK 376
DEE + L SI V K Y+ F+++ Q A+ G+VY G AI+
Sbjct: 2 DEEILEKLRSIVSVGDPKKKYTRFEKIGQGAS----------GTVYTAMDVATGQEVAIR 51
Query: 377 KVNGD-------VSKEIALLNKINHSNLIILSGVCFNEGNCYLVYEYAVNGTLSDWVFSN 429
++N + EI ++ + + N++ ++V EY G+L+D V
Sbjct: 52 QMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTET 111
Query: 430 KNEGKYLDWKQRIQIALDVATGLNYLHSFTNPPHVHKDINSSNVLLDSDLRAKIANFAMA 489
+D Q + + L +LHS +H+DI S N+LL D K+ +F
Sbjct: 112 -----CMDEGQIAAVCRECLQALEFLHSNQ---VIHRDIKSDNILLGMDGSVKLTDFGFC 163
Query: 490 RPAEGQEGEFALTRHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLILEMLTGK 542
++ + + +VGT +MAPE + K+D+++ G++ +EM+ G+
Sbjct: 164 AQITPEQSKRST---MVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGE 213
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 76/158 (48%), Gaps = 15/158 (9%)
Query: 385 EIALLNKINHSNLIILSGVCFNEGNCYLVYEYAVNGTLSDWVFSN-KNEGKYLDWKQRIQ 443
E +L +N L+ L + N Y+V EY G + FS+ + G++ + R
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEM----FSHLRRIGRFSEPHARFY 146
Query: 444 IALDVATGLNYLHSFTNPPHVHKDINSSNVLLDSDLRAKIANFAMARPAEGQEGEFALTR 503
A V T YLHS +++D+ N+L+D K+A+F A+ +G+ T
Sbjct: 147 AAQIVLT-FEYLHSLD---LIYRDLKPENLLIDQQGYIKVADFGFAKRVKGR------TW 196
Query: 504 HIVGTKGYMAPEYLENGLVSTKLDVYAFGVLILEMLTG 541
+ GT Y+APE + + + +D +A GVLI EM G
Sbjct: 197 XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 77/158 (48%), Gaps = 15/158 (9%)
Query: 385 EIALLNKINHSNLIILSGVCFNEGNCYLVYEYAVNGTLSDWVFSN-KNEGKYLDWKQRIQ 443
E +L +N L+ L + N Y+V EYA G + FS+ + G++ + R
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEM----FSHLRRIGRFSEPHARFY 146
Query: 444 IALDVATGLNYLHSFTNPPHVHKDINSSNVLLDSDLRAKIANFAMARPAEGQEGEFALTR 503
A V T YLHS +++D+ N+++D K+ +F +A+ +G+ T
Sbjct: 147 AAQIVLT-FEYLHSLD---LIYRDLKPENLMIDQQGYIKVTDFGLAKRVKGR------TW 196
Query: 504 HIVGTKGYMAPEYLENGLVSTKLDVYAFGVLILEMLTG 541
+ GT Y+APE + + + +D +A GVLI EM G
Sbjct: 197 XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/188 (28%), Positives = 83/188 (44%), Gaps = 20/188 (10%)
Query: 365 RGKINGGFAAIKKVNGDV---SKEIA-------LLNKINHSNLIILSGVCFNEGNCYLVY 414
R K G + A+K + +V E+A +L H L L V
Sbjct: 28 REKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVM 87
Query: 415 EYAVNGTLSDWVFSNKNEGKYLDWKQRIQIALDVATGLNYLHSFTNPPHVHKDINSSNVL 474
EYA G L F E + + + R A ++ + L YLHS V++DI N++
Sbjct: 88 EYANGGEL---FFHLSRERVFTEERARFYGA-EIVSALEYLHSRDV---VYRDIKLENLM 140
Query: 475 LDSDLRAKIANFAMARPAEGQEGEFALTRHIVGTKGYMAPEYLENGLVSTKLDVYAFGVL 534
LD D KI +F + + EG + A + GT Y+APE LE+ +D + GV+
Sbjct: 141 LDKDGHIKITDFGLCK--EGI-SDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVV 197
Query: 535 ILEMLTGK 542
+ EM+ G+
Sbjct: 198 MYEMMCGR 205
>pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Nvp- Tae684
pdb|2XBA|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Pha-E429
Length = 315
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/243 (22%), Positives = 94/243 (38%), Gaps = 45/243 (18%)
Query: 381 DVSKEIALLNKINHSNLIILSGVCFNEGNCYLVYEYAVNGTLSDWVFSNK---NEGKYLD 437
D E +++K NH N++ GV +++ E G L ++ + ++ L
Sbjct: 71 DFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLA 130
Query: 438 WKQRIQIALDVATGLNYLHSFTNPPHVHKDINSSNVLL---DSDLRAKIANFAMARPAEG 494
+ +A D+A G YL +H+DI + N LL AKI +F MAR
Sbjct: 131 MLDLLHVARDIACGCQYLEENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMAR---- 183
Query: 495 QEGEFALTRHIVGTKG--------YMAPEYLENGLVSTKLDVYAFGVLILEMLTGKEAAA 546
+ R KG +M PE G+ ++K D ++FGVL+ E+ +
Sbjct: 184 -----DIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS------ 232
Query: 547 LHAEENNMHLSDVLNAVLTKEDGEESLRHFIDPTLQGNYPLELALLVIRLIDACLKKDPT 606
L + + + F+ + + P V R++ C + P
Sbjct: 233 -------------LGYMPYPSKSNQEVLEFVTSGGRMDPPKNCPGPVYRIMTQCWQHQPE 279
Query: 607 DRP 609
DRP
Sbjct: 280 DRP 282
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 66/245 (26%), Positives = 108/245 (44%), Gaps = 38/245 (15%)
Query: 384 KEIALLNKINHSNLIILSGVCFNEGNCYLVYEYAVNGTLSDWVFSNKNEGKYLDWKQRIQ 443
+E + + +H +++ L GV E +++ E G L ++ K LD I
Sbjct: 60 QEALTMRQFDHPHIVKLIGV-ITENPVWIIMELCTLGELRSFLQVRKFS---LDLASLIL 115
Query: 444 IALDVATGLNYLHSFTNPPHVHKDINSSNVLLDSDLRAKIANFAMARPAEGQEGEFALTR 503
A ++T L YL S VH+DI + NVL+ + K+ +F ++R E +
Sbjct: 116 YAYQLSTALAYLES---KRFVHRDIAARNVLVSATDCVKLGDFGLSRYMED-------ST 165
Query: 504 HIVGTKG-----YMAPEYLENGLVSTKLDVYAFGVLILEMLTGKEAAALHAEENNMHLSD 558
+ +KG +MAPE + ++ DV+ FGV + E+L +NN D
Sbjct: 166 YYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHG-VKPFQGVKNN----D 220
Query: 559 VLNAVLTKEDGEESLRHFIDPTLQGNYPLELALLVIRLIDACLKKDPTDRPTMYEIEHSL 618
V+ + E+GE R + P N P L L+ + C DP+ RP E++ L
Sbjct: 221 VIGRI---ENGE---RLPMPP----NCPPTLYSLMTK----CWAYDPSRRPRFTELKAQL 266
Query: 619 SNILN 623
S IL
Sbjct: 267 STILE 271
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 40/160 (25%), Positives = 77/160 (48%), Gaps = 8/160 (5%)
Query: 382 VSKEIALLNKINHSNLIILSGVCFNEGNCYLVYEYAVNGTLSDWVFSNKNEGKYLDWKQR 441
V++E ++++++H + L ++ Y YA NG L ++ + G + + R
Sbjct: 76 VTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYI---RKIGSFDETCTR 132
Query: 442 IQIALDVATGLNYLHSFTNPPHVHKDINSSNVLLDSDLRAKIANFAMARPAEGQEGEFAL 501
A ++ + L YLH +H+D+ N+LL+ D+ +I +F A+ E + A
Sbjct: 133 FYTA-EIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAK-VLSPESKQAR 187
Query: 502 TRHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLILEMLTG 541
VGT Y++PE L D++A G +I +++ G
Sbjct: 188 ANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 227
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 84/166 (50%), Gaps = 17/166 (10%)
Query: 381 DVSKEIALLNKINHSNLIILSGVCFNEGNCYLVYEYAVNGTLSDWVFSNKNEGKYLDWKQ 440
D+ +E+++L +I H N+I L V N+ + L+ E G L D++ E + L ++
Sbjct: 59 DIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFL----AEKESLTEEE 114
Query: 441 RIQIALDVATGLNYLHSFTNPPHVHKDINSSNV-LLDSDL---RAKIANFAMARPAE-GQ 495
+ + G+ YLHS H D+ N+ LLD ++ R KI +F +A + G
Sbjct: 115 ATEFLKQILNGVYYLHSLQI---AHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGN 171
Query: 496 EGEFALTRHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLILEMLTG 541
E ++I GT ++APE + + + D+++ GV+ +L+G
Sbjct: 172 E-----FKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 212
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/233 (24%), Positives = 104/233 (44%), Gaps = 32/233 (13%)
Query: 321 DEESQDFLESISGVAQSLKVYS-FKEL-QSATDNFSFTCRIQGSVYRGK--INGGFAAIK 376
DEE + L SI V K Y+ F+++ Q A+ G+VY G AI+
Sbjct: 3 DEEILEKLRSIVSVGDPKKKYTRFEKIGQGAS----------GTVYTAMDVATGQEVAIR 52
Query: 377 KVNGD-------VSKEIALLNKINHSNLIILSGVCFNEGNCYLVYEYAVNGTLSDWVFSN 429
++N + EI ++ + + N++ ++V EY G+L+D V
Sbjct: 53 QMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTET 112
Query: 430 KNEGKYLDWKQRIQIALDVATGLNYLHSFTNPPHVHKDINSSNVLLDSDLRAKIANFAMA 489
+D Q + + L +LHS +H+DI S N+LL D K+ +F
Sbjct: 113 -----CMDEGQIAAVCRECLQALEFLHSNQ---VIHRDIKSDNILLGMDGSVKLTDFGFC 164
Query: 490 RPAEGQEGEFALTRHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLILEMLTGK 542
++ + + +VGT +MAPE + K+D+++ G++ +EM+ G+
Sbjct: 165 AQITPEQSKRS---XMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGE 214
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 63/256 (24%), Positives = 110/256 (42%), Gaps = 42/256 (16%)
Query: 385 EIALLNKINHS-NLIILSGVCFNEGNCYLV-YEYAVNGTLSDWVFSNKNE--------GK 434
E+ +L I H N++ L G C G +V E+ G LS ++ S +NE
Sbjct: 80 ELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKD 139
Query: 435 YLDWKQRIQIALDVATGLNYLHSFTNPPHVHKDINSSNVLLDSDLRAKIANFAMAR---- 490
+L + I + VA G+ +L S +H+D+ + N+LL KI +F +AR
Sbjct: 140 FLTLEHLIXYSFQVAKGMEFLASRKX---IHRDLAARNILLSEKNVVKIXDFGLARDIYK 196
Query: 491 -PAEGQEGEFALTRHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLILEMLTGKEAAALHA 549
P ++G+ L +MAPE + + + + + DV++FGVL+ E+ + +
Sbjct: 197 DPDYVRKGDARLPLK------WMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGV 250
Query: 550 EENNMHLSDVLNAVLTKEDGEESLRHFIDPTLQGNYPLELALLVIRLIDACLKKDPTDRP 609
+ + EE R + T + ++D C +P+ RP
Sbjct: 251 KID-----------------EEFXRRLKEGTRMRAPDYTTPEMYQTMLD-CWHGEPSQRP 292
Query: 610 TMYEIEHSLSNILNAS 625
T E+ L N+L A+
Sbjct: 293 TFSELVEHLGNLLQAN 308
>pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 55/243 (22%), Positives = 94/243 (38%), Gaps = 45/243 (18%)
Query: 381 DVSKEIALLNKINHSNLIILSGVCFNEGNCYLVYEYAVNGTLSDWVFSNK---NEGKYLD 437
D E +++K NH N++ GV +++ E G L ++ + ++ L
Sbjct: 94 DFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLA 153
Query: 438 WKQRIQIALDVATGLNYLHSFTNPPHVHKDINSSNVLL---DSDLRAKIANFAMARPAEG 494
+ +A D+A G YL +H+DI + N LL AKI +F MAR
Sbjct: 154 MLDLLHVARDIACGCQYLEENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMAR---- 206
Query: 495 QEGEFALTRHIVGTKG--------YMAPEYLENGLVSTKLDVYAFGVLILEMLTGKEAAA 546
+ R KG +M PE G+ ++K D ++FGVL+ E+ +
Sbjct: 207 -----DIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS------ 255
Query: 547 LHAEENNMHLSDVLNAVLTKEDGEESLRHFIDPTLQGNYPLELALLVIRLIDACLKKDPT 606
L + + + F+ + + P V R++ C + P
Sbjct: 256 -------------LGYMPYPSKSNQEVLEFVTSGGRMDPPKNCPGPVYRIMTQCWQHQPE 302
Query: 607 DRP 609
DRP
Sbjct: 303 DRP 305
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 84/166 (50%), Gaps = 17/166 (10%)
Query: 381 DVSKEIALLNKINHSNLIILSGVCFNEGNCYLVYEYAVNGTLSDWVFSNKNEGKYLDWKQ 440
D+ +E+++L +I H N+I L V N+ + L+ E G L D++ E + L ++
Sbjct: 60 DIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFL----AEKESLTEEE 115
Query: 441 RIQIALDVATGLNYLHSFTNPPHVHKDINSSNV-LLDSDL---RAKIANFAMARPAE-GQ 495
+ + G+ YLHS H D+ N+ LLD ++ R KI +F +A + G
Sbjct: 116 ATEFLKQILNGVYYLHSLQI---AHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGN 172
Query: 496 EGEFALTRHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLILEMLTG 541
E ++I GT ++APE + + + D+++ GV+ +L+G
Sbjct: 173 E-----FKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 40/160 (25%), Positives = 77/160 (48%), Gaps = 8/160 (5%)
Query: 382 VSKEIALLNKINHSNLIILSGVCFNEGNCYLVYEYAVNGTLSDWVFSNKNEGKYLDWKQR 441
V++E ++++++H + L ++ Y YA NG L ++ + G + + R
Sbjct: 76 VTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYI---RKIGSFDETCTR 132
Query: 442 IQIALDVATGLNYLHSFTNPPHVHKDINSSNVLLDSDLRAKIANFAMARPAEGQEGEFAL 501
A ++ + L YLH +H+D+ N+LL+ D+ +I +F A+ E + A
Sbjct: 133 FYTA-EIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAK-VLSPESKQAR 187
Query: 502 TRHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLILEMLTG 541
VGT Y++PE L D++A G +I +++ G
Sbjct: 188 ANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 227
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 84/166 (50%), Gaps = 17/166 (10%)
Query: 381 DVSKEIALLNKINHSNLIILSGVCFNEGNCYLVYEYAVNGTLSDWVFSNKNEGKYLDWKQ 440
D+ +E+++L +I H N+I L V N+ + L+ E G L D++ E + L ++
Sbjct: 60 DIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFL----AEKESLTEEE 115
Query: 441 RIQIALDVATGLNYLHSFTNPPHVHKDINSSNV-LLDSDL---RAKIANFAMARPAE-GQ 495
+ + G+ YLHS H D+ N+ LLD ++ R KI +F +A + G
Sbjct: 116 ATEFLKQILNGVYYLHSLQI---AHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGN 172
Query: 496 EGEFALTRHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLILEMLTG 541
E ++I GT ++APE + + + D+++ GV+ +L+G
Sbjct: 173 E-----FKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 84/166 (50%), Gaps = 17/166 (10%)
Query: 381 DVSKEIALLNKINHSNLIILSGVCFNEGNCYLVYEYAVNGTLSDWVFSNKNEGKYLDWKQ 440
D+ +E+++L +I H N+I L V N+ + L+ E G L D++ E + L ++
Sbjct: 60 DIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFL----AEKESLTEEE 115
Query: 441 RIQIALDVATGLNYLHSFTNPPHVHKDINSSNV-LLDSDL---RAKIANFAMARPAE-GQ 495
+ + G+ YLHS H D+ N+ LLD ++ R KI +F +A + G
Sbjct: 116 ATEFLKQILNGVYYLHSLQI---AHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGN 172
Query: 496 EGEFALTRHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLILEMLTG 541
E ++I GT ++APE + + + D+++ GV+ +L+G
Sbjct: 173 E-----FKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma
Kinase In Complex With Ch5424802
Length = 344
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 62/278 (22%), Positives = 106/278 (38%), Gaps = 60/278 (21%)
Query: 361 GSVYRGKINGGF-------AAIKKVNG--------DVSKEIALLNKINHSNLIILSGVCF 405
G VY G+++G A+K + D E +++K NH N++ GV
Sbjct: 61 GEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSL 120
Query: 406 NEGNCYLVYEYAVNGTLSDWVFSNK---NEGKYLDWKQRIQIALDVATGLNYLHSFTNPP 462
+++ E G L ++ + ++ L + +A D+A G YL
Sbjct: 121 QSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENH--- 177
Query: 463 HVHKDINSSNVLLDSD---LRAKIANFAMARPAEGQEGEFALTRHIVGTKG--------Y 511
+H+DI + N LL AKI +F MAR + R KG +
Sbjct: 178 FIHRDIAARNCLLTCPGPGRVAKIGDFGMAR---------DIYRASYYRKGGCAMLPVKW 228
Query: 512 MAPEYLENGLVSTKLDVYAFGVLILEMLTGKEAAALHAEENNMHLSDVLNAVLTKEDGEE 571
M PE G+ ++K D ++FGVL+ E+ + L + +
Sbjct: 229 MPPEAFMEGIFTSKTDTWSFGVLLWEIFS-------------------LGYMPYPSKSNQ 269
Query: 572 SLRHFIDPTLQGNYPLELALLVIRLIDACLKKDPTDRP 609
+ F+ + + P V R++ C + P DRP
Sbjct: 270 EVLEFVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRP 307
>pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In
Complex With Crizotinib
Length = 327
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 55/243 (22%), Positives = 94/243 (38%), Gaps = 45/243 (18%)
Query: 381 DVSKEIALLNKINHSNLIILSGVCFNEGNCYLVYEYAVNGTLSDWVFSNK---NEGKYLD 437
D E +++K NH N++ GV +++ E G L ++ + ++ L
Sbjct: 79 DFLMEALIISKFNHQNIVRCIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLA 138
Query: 438 WKQRIQIALDVATGLNYLHSFTNPPHVHKDINSSNVLLDSD---LRAKIANFAMARPAEG 494
+ +A D+A G YL +H+DI + N LL AKI +F MAR
Sbjct: 139 MLDLLHVARDIACGCQYLEENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMAR---- 191
Query: 495 QEGEFALTRHIVGTKG--------YMAPEYLENGLVSTKLDVYAFGVLILEMLTGKEAAA 546
+ R KG +M PE G+ ++K D ++FGVL+ E+ +
Sbjct: 192 -----DIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS------ 240
Query: 547 LHAEENNMHLSDVLNAVLTKEDGEESLRHFIDPTLQGNYPLELALLVIRLIDACLKKDPT 606
L + + + F+ + + P V R++ C + P
Sbjct: 241 -------------LGYMPYPSKSNQEVLEFVTSGGRMDPPKNCPGPVYRIMTQCWQHQPE 287
Query: 607 DRP 609
DRP
Sbjct: 288 DRP 290
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 84/166 (50%), Gaps = 17/166 (10%)
Query: 381 DVSKEIALLNKINHSNLIILSGVCFNEGNCYLVYEYAVNGTLSDWVFSNKNEGKYLDWKQ 440
D+ +E+++L +I H N+I L V N+ + L+ E G L D++ E + L ++
Sbjct: 59 DIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFL----AEKESLTEEE 114
Query: 441 RIQIALDVATGLNYLHSFTNPPHVHKDINSSNV-LLDSDL---RAKIANFAMARPAE-GQ 495
+ + G+ YLHS H D+ N+ LLD ++ R KI +F +A + G
Sbjct: 115 ATEFLKQILNGVYYLHSLQI---AHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGN 171
Query: 496 EGEFALTRHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLILEMLTG 541
E ++I GT ++APE + + + D+++ GV+ +L+G
Sbjct: 172 E-----FKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 212
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 48/166 (28%), Positives = 82/166 (49%), Gaps = 21/166 (12%)
Query: 382 VSKEIALLNKINHSNLIILSGVCFNEGNCYLVYEYAVNGTLSDWVFSNK----NEGKYLD 437
V +EI+ L + H ++I L V + +V EYA G L D++ K +EG+
Sbjct: 56 VEREISYLKLLRHPHIIKLYDVITTPTDIVMVIEYA-GGELFDYIVEKKRMTEDEGRRF- 113
Query: 438 WKQRIQIALDVATGLNYLHSFTNPPHVHKDINSSNVLLDSDLRAKIANFAMARPAEGQEG 497
++Q + + Y H VH+D+ N+LLD +L KIA+F ++ +G
Sbjct: 114 FQQ-------IICAIEYCHRHKI---VHRDLKPENLLLDDNLNVKIADFGLSNIM--TDG 161
Query: 498 EFALTRHIVGTKGYMAPEYLENGLVS-TKLDVYAFGVLILEMLTGK 542
F T G+ Y APE + L + ++DV++ G+++ ML G+
Sbjct: 162 NFLKTS--CGSPNYAAPEVINGKLYAGPEVDVWSCGIVLYVMLVGR 205
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 84/166 (50%), Gaps = 17/166 (10%)
Query: 381 DVSKEIALLNKINHSNLIILSGVCFNEGNCYLVYEYAVNGTLSDWVFSNKNEGKYLDWKQ 440
D+ +E+++L +I H N+I L V N+ + L+ E G L D++ E + L ++
Sbjct: 60 DIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFL----AEKESLTEEE 115
Query: 441 RIQIALDVATGLNYLHSFTNPPHVHKDINSSNV-LLDSDL---RAKIANFAMARPAE-GQ 495
+ + G+ YLHS H D+ N+ LLD ++ R KI +F +A + G
Sbjct: 116 ATEFLKQILNGVYYLHSLQI---AHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGN 172
Query: 496 EGEFALTRHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLILEMLTG 541
E ++I GT ++APE + + + D+++ GV+ +L+G
Sbjct: 173 E-----FKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 84/166 (50%), Gaps = 17/166 (10%)
Query: 381 DVSKEIALLNKINHSNLIILSGVCFNEGNCYLVYEYAVNGTLSDWVFSNKNEGKYLDWKQ 440
D+ +E+++L +I H N+I L V N+ + L+ E G L D++ E + L ++
Sbjct: 60 DIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFL----AEKESLTEEE 115
Query: 441 RIQIALDVATGLNYLHSFTNPPHVHKDINSSNV-LLDSDL---RAKIANFAMARPAE-GQ 495
+ + G+ YLHS H D+ N+ LLD ++ R KI +F +A + G
Sbjct: 116 ATEFLKQILNGVYYLHSLQI---AHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGN 172
Query: 496 EGEFALTRHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLILEMLTG 541
E ++I GT ++APE + + + D+++ GV+ +L+G
Sbjct: 173 E-----FKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In
Complex With Crizotinib (Pf-02341066)
Length = 327
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 55/243 (22%), Positives = 94/243 (38%), Gaps = 45/243 (18%)
Query: 381 DVSKEIALLNKINHSNLIILSGVCFNEGNCYLVYEYAVNGTLSDWVFSNK---NEGKYLD 437
D E +++K NH N++ GV +++ E G L ++ + ++ L
Sbjct: 79 DFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLA 138
Query: 438 WKQRIQIALDVATGLNYLHSFTNPPHVHKDINSSNVLLDSD---LRAKIANFAMARPAEG 494
+ +A D+A G YL +H+DI + N LL AKI +F MAR
Sbjct: 139 MLDLLHVARDIACGCQYLEENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMAR---- 191
Query: 495 QEGEFALTRHIVGTKG--------YMAPEYLENGLVSTKLDVYAFGVLILEMLTGKEAAA 546
+ R KG +M PE G+ ++K D ++FGVL+ E+ +
Sbjct: 192 -----DIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS------ 240
Query: 547 LHAEENNMHLSDVLNAVLTKEDGEESLRHFIDPTLQGNYPLELALLVIRLIDACLKKDPT 606
L + + + F+ + + P V R++ C + P
Sbjct: 241 -------------LGYMPYPSKSNQEVLEFVTSGGRMDPPKNCPGPVYRIMTQCWQHQPE 287
Query: 607 DRP 609
DRP
Sbjct: 288 DRP 290
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 54/188 (28%), Positives = 83/188 (44%), Gaps = 20/188 (10%)
Query: 365 RGKINGGFAAIKKVNGDV---SKEIA-------LLNKINHSNLIILSGVCFNEGNCYLVY 414
R K G + A+K + +V E+A +L H L L V
Sbjct: 25 REKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVM 84
Query: 415 EYAVNGTLSDWVFSNKNEGKYLDWKQRIQIALDVATGLNYLHSFTNPPHVHKDINSSNVL 474
EYA G L F E + + + R A ++ + L YLHS V++DI N++
Sbjct: 85 EYANGGEL---FFHLSRERVFTEERARFYGA-EIVSALEYLHSRDV---VYRDIKLENLM 137
Query: 475 LDSDLRAKIANFAMARPAEGQEGEFALTRHIVGTKGYMAPEYLENGLVSTKLDVYAFGVL 534
LD D KI +F + + EG + A + GT Y+APE LE+ +D + GV+
Sbjct: 138 LDKDGHIKITDFGLCK--EGI-SDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVV 194
Query: 535 ILEMLTGK 542
+ EM+ G+
Sbjct: 195 MYEMMCGR 202
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 42/156 (26%), Positives = 80/156 (51%), Gaps = 8/156 (5%)
Query: 385 EIALLNKINHSNLIILSGVCFNEGNCYLVYEYAVNGTLSDWVFSNKNEGKYLDWKQRIQI 444
E ++ ++++ ++ + G+C E + LV E A G L+ ++ N+ ++ K I++
Sbjct: 62 EANVMQQLDNPYIVRMIGICEAE-SWMLVMEMAELGPLNKYLQQNR----HVKDKNIIEL 116
Query: 445 ALDVATGLNYLHSFTNPPHVHKDINSSNVLLDSDLRAKIANFAMARPAEGQEGEFALTRH 504
V+ G+ YL VH+D+ + NVLL + AKI++F +++ E + H
Sbjct: 117 VHQVSMGMKYLEESN---FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENXYKAQTH 173
Query: 505 IVGTKGYMAPEYLENGLVSTKLDVYAFGVLILEMLT 540
+ APE + S+K DV++FGVL+ E +
Sbjct: 174 GKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFS 209
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 90/202 (44%), Gaps = 34/202 (16%)
Query: 361 GSVYRG--KINGGFAAIKKVNGDVS--------KEIALLNKINHSNLIILSGVCFNEGNC 410
+VY+G K G + A+K+V D +EI+L+ ++ H N++ L V E
Sbjct: 19 ATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELKHENIVRLYDVIHTENKL 78
Query: 411 YLVYEYAVNGT---LSDWVFSNKNEG------KYLDWKQRIQIALDVATGLNYLHSFTNP 461
LV+E+ N + N G KY W+ + GL + H
Sbjct: 79 TLVFEFMDNDLKKYMDSRTVGNTPRGLELNLVKYFQWQ--------LLQGLAFCHENKI- 129
Query: 462 PHVHKDINSSNVLLDSDLRAKIANFAMARPAEGQEGEFALTRHIVGTKGYMAPEYLENGL 521
+H+D+ N+L++ + K+ +F +AR F+ V T Y AP+ L
Sbjct: 130 --LHRDLKPQNLLINKRGQLKLGDFGLARAFGIPVNTFSSE---VVTLWYRAPDVLMGSR 184
Query: 522 V-STKLDVYAFGVLILEMLTGK 542
ST +D+++ G ++ EM+TGK
Sbjct: 185 TYSTSIDIWSCGCILAEMITGK 206
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 84/166 (50%), Gaps = 17/166 (10%)
Query: 381 DVSKEIALLNKINHSNLIILSGVCFNEGNCYLVYEYAVNGTLSDWVFSNKNEGKYLDWKQ 440
D+ +E+++L +I H N+I L V N+ + L+ E G L D++ E + L ++
Sbjct: 60 DIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFL----AEKESLTEEE 115
Query: 441 RIQIALDVATGLNYLHSFTNPPHVHKDINSSNV-LLDSDL---RAKIANFAMARPAE-GQ 495
+ + G+ YLHS H D+ N+ LLD ++ R KI +F +A + G
Sbjct: 116 ATEFLKQILNGVYYLHSLQI---AHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGN 172
Query: 496 EGEFALTRHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLILEMLTG 541
E ++I GT ++APE + + + D+++ GV+ +L+G
Sbjct: 173 E-----FKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 68/246 (27%), Positives = 108/246 (43%), Gaps = 31/246 (12%)
Query: 318 KKFDEESQDFLE---SISGVAQSLKVYSFKELQSATDNFSFTCRIQGSVYRGKI------ 368
KK +EE DF S + A+ ++V K T N ++ G GK+
Sbjct: 114 KKQEEEEMDFRSGSPSDNSGAEEMEVSLAKPKHRVTMNEFEYLKLLGKGTFGKVILVKEK 173
Query: 369 -NGGFAAIKKVNGDV---SKEIA-------LLNKINHSNLIILSGVCFNEGNCYLVYEYA 417
G + A+K + +V E+A +L H L L V EYA
Sbjct: 174 ATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYA 233
Query: 418 VNGTLSDWVFSNKNEGKYLDWKQRIQIALDVATGLNYLHSFTNPPHVHKDINSSNVLLDS 477
G L F E + + + R A ++ + L+YLHS N V++D+ N++LD
Sbjct: 234 NGGEL---FFHLSRERVFSEDRARFYGA-EIVSALDYLHSEKNV--VYRDLKLENLMLDK 287
Query: 478 DLRAKIANFAMARPAEG-QEGEFALTRHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLIL 536
D KI +F + + EG ++G A + GT Y+APE LE+ +D + GV++
Sbjct: 288 DGHIKITDFGLCK--EGIKDG--ATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMY 343
Query: 537 EMLTGK 542
EM+ G+
Sbjct: 344 EMMCGR 349
>pdb|3MY0|A Chain A, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|B Chain B, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|C Chain C, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|D Chain D, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|E Chain E, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|F Chain F, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|G Chain G, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|H Chain H, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|I Chain I, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|J Chain J, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|K Chain K, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|L Chain L, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|M Chain M, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|N Chain N, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|O Chain O, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|P Chain P, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|Q Chain Q, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|R Chain R, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|S Chain S, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|T Chain T, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|U Chain U, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|V Chain V, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|W Chain W, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|X Chain X, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
Length = 305
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 70/297 (23%), Positives = 128/297 (43%), Gaps = 48/297 (16%)
Query: 361 GSVYRGKINGGFAAIK----KVNGDVSKEIALLNKI--NHSNLIILSGVCFNEGNC---- 410
G V+RG +G A+K + +E + N + H N++ N
Sbjct: 22 GEVWRGLWHGESVAVKIFSSRDEQSWFRETEIYNTVLLRHDNILGFIASDMTSRNSSTQL 81
Query: 411 YLVYEYAVNGTLSDWVFSNKNEGKYLDWKQRIQIALDVATGLNYLH-----SFTNPPHVH 465
+L+ Y +G+L D++ + + L+ +++A+ A GL +LH + P H
Sbjct: 82 WLITHYHEHGSLYDFL-----QRQTLEPHLALRLAVSAACGLAHLHVEIFGTQGKPAIAH 136
Query: 466 KDINSSNVLLDSDLRAKIANFAMA-RPAEGQEGEFALTRHIVGTKGYMAPEYLENGLVS- 523
+D S NVL+ S+L+ IA+ +A ++G + VGTK YMAPE L+ + +
Sbjct: 137 RDFKSRNVLVKSNLQCCIADLGLAVMHSQGSDYLDIGNNPRVGTKRYMAPEVLDEQIRTD 196
Query: 524 -----TKLDVYAFGVLILEMLTGKEAAALHAEENNMHLSDVLNAVLTKEDGEESL----- 573
D++AFG+++ E+ + E+ DV+ + ED ++ +
Sbjct: 197 CFESYKWTDIWAFGLVLWEIARRTIVNGI-VEDYRPPFYDVVPNDPSFEDMKKVVCVDQQ 255
Query: 574 ------RHFIDPTLQGNYPLELALLVIRLIDACLKKDPTDRPTMYEIEHSLSNILNA 624
R DP L G + +++ C +P+ R T I+ +L I N+
Sbjct: 256 TPTIPNRLAADPVLSG---------LAQMMRECWYPNPSARLTALRIKKTLQKISNS 303
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 84/166 (50%), Gaps = 17/166 (10%)
Query: 381 DVSKEIALLNKINHSNLIILSGVCFNEGNCYLVYEYAVNGTLSDWVFSNKNEGKYLDWKQ 440
D+ +E+++L +I H N+I L V N+ + L+ E G L D++ E + L ++
Sbjct: 60 DIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFL----AEKESLTEEE 115
Query: 441 RIQIALDVATGLNYLHSFTNPPHVHKDINSSNV-LLDSDL---RAKIANFAMARPAE-GQ 495
+ + G+ YLHS H D+ N+ LLD ++ R KI +F +A + G
Sbjct: 116 ATEFLKQILNGVYYLHSLQI---AHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGN 172
Query: 496 EGEFALTRHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLILEMLTG 541
E ++I GT ++APE + + + D+++ GV+ +L+G
Sbjct: 173 E-----FKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 76/158 (48%), Gaps = 15/158 (9%)
Query: 385 EIALLNKINHSNLIILSGVCFNEGNCYLVYEYAVNGTLSDWVFSN-KNEGKYLDWKQRIQ 443
E +L +N L+ L + N Y+V EY G + FS+ + G++ + R
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYMPGGDM----FSHLRRIGRFSEPHARFY 146
Query: 444 IALDVATGLNYLHSFTNPPHVHKDINSSNVLLDSDLRAKIANFAMARPAEGQEGEFALTR 503
A V T YLHS +++D+ N+L+D K+A+F A+ +G+ T
Sbjct: 147 AAQIVLT-FEYLHSLD---LIYRDLKPENLLIDQQGYIKVADFGFAKRVKGR------TW 196
Query: 504 HIVGTKGYMAPEYLENGLVSTKLDVYAFGVLILEMLTG 541
+ GT Y+APE + + + +D +A GVLI EM G
Sbjct: 197 XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 76/158 (48%), Gaps = 15/158 (9%)
Query: 385 EIALLNKINHSNLIILSGVCFNEGNCYLVYEYAVNGTLSDWVFSN-KNEGKYLDWKQRIQ 443
E +L +N L+ L + N Y+V EY G + FS+ + G++ + R
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYMPGGDM----FSHLRRIGRFSEPHARFY 146
Query: 444 IALDVATGLNYLHSFTNPPHVHKDINSSNVLLDSDLRAKIANFAMARPAEGQEGEFALTR 503
A V T YLHS +++D+ N+L+D K+A+F A+ +G+ T
Sbjct: 147 AAQIVLT-FEYLHSLD---LIYRDLKPENLLIDQQGYIKVADFGFAKRVKGR------TW 196
Query: 504 HIVGTKGYMAPEYLENGLVSTKLDVYAFGVLILEMLTG 541
+ GT Y+APE + + + +D +A GVLI EM G
Sbjct: 197 XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 77/165 (46%), Gaps = 14/165 (8%)
Query: 378 VNGDVSKEIALLNKINHSNLIILSGVCFNEGNCYLVYEYAVNGTLSDWVFSNKNEGKYLD 437
V + +EI + ++H N++ L ++ YL+ EYA G L + + D
Sbjct: 66 VEHQLRREIEIQAHLHHPNILRLYNYFYDRRRIYLILEYAPRGEL----YKELQKSCTFD 121
Query: 438 WKQRIQIALDVATGLNYLHSFTNPPHVHKDINSSNVLLDSDLRAKIANFAMARPAEGQEG 497
++ I ++A L Y H +H+DI N+LL KIA+F + A
Sbjct: 122 EQRTATIMEELADALMYCHGKKV---IHRDIKPENLLLGLKGELKIADFGWSVHAP---- 174
Query: 498 EFALTRH-IVGTKGYMAPEYLENGLVSTKLDVYAFGVLILEMLTG 541
+L R + GT Y+ PE +E + + K+D++ GVL E+L G
Sbjct: 175 --SLRRKTMCGTLDYLPPEMIEGRMHNEKVDLWCIGVLCYELLVG 217
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 90/201 (44%), Gaps = 28/201 (13%)
Query: 361 GSVYRGK--INGGFAAIK--KVNGD----VSKEIALLNKINHSNLIILSGVCFNEGN--- 409
G VY+G+ G AAIK V GD + +EI +L K +H I F + N
Sbjct: 38 GQVYKGRHVKTGQLAAIKVMDVTGDEEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPG 97
Query: 410 ----CYLVYEYAVNGTLSDWVFSNKNEGKYLDWKQRIQIALDVATGLNYLHSFTNPPHVH 465
+LV E+ G+++D + + K +W I ++ GL++LH +H
Sbjct: 98 MDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWI--AYICREILRGLSHLHQHKV---IH 152
Query: 466 KDINSSNVLLDSDLRAKIANFAMARPAEGQEGEFALTRHIVGTKGYMAPEYLE-----NG 520
+DI NVLL + K+ +F ++ + G +GT +MAPE + +
Sbjct: 153 RDIKGQNVLLTENAEVKLVDFGVSAQLDRTVGR---RNTFIGTPYWMAPEVIACDENPDA 209
Query: 521 LVSTKLDVYAFGVLILEMLTG 541
K D+++ G+ +EM G
Sbjct: 210 TYDFKSDLWSLGITAIEMAEG 230
>pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Piperidine-Carboxamide Inhibitor 2
Length = 327
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 55/243 (22%), Positives = 94/243 (38%), Gaps = 45/243 (18%)
Query: 381 DVSKEIALLNKINHSNLIILSGVCFNEGNCYLVYEYAVNGTLSDWVFSNK---NEGKYLD 437
D E +++K NH N++ GV +++ E G L ++ + ++ L
Sbjct: 80 DFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLA 139
Query: 438 WKQRIQIALDVATGLNYLHSFTNPPHVHKDINSSNVLLDSD---LRAKIANFAMARPAEG 494
+ +A D+A G YL +H+DI + N LL AKI +F MAR
Sbjct: 140 MLDLLHVARDIACGCQYLEENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMAR---- 192
Query: 495 QEGEFALTRHIVGTKG--------YMAPEYLENGLVSTKLDVYAFGVLILEMLTGKEAAA 546
+ R KG +M PE G+ ++K D ++FGVL+ E+ +
Sbjct: 193 -----DIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS------ 241
Query: 547 LHAEENNMHLSDVLNAVLTKEDGEESLRHFIDPTLQGNYPLELALLVIRLIDACLKKDPT 606
L + + + F+ + + P V R++ C + P
Sbjct: 242 -------------LGYMPYPSKSNQEVLEFVTSGGRMDPPKNCPGPVYRIMTQCWQHQPE 288
Query: 607 DRP 609
DRP
Sbjct: 289 DRP 291
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 84/166 (50%), Gaps = 17/166 (10%)
Query: 381 DVSKEIALLNKINHSNLIILSGVCFNEGNCYLVYEYAVNGTLSDWVFSNKNEGKYLDWKQ 440
D+ +E+++L +I H N+I L V N+ + L+ E G L D++ E + L ++
Sbjct: 60 DIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFL----AEKESLTEEE 115
Query: 441 RIQIALDVATGLNYLHSFTNPPHVHKDINSSNV-LLDSDL---RAKIANFAMARPAE-GQ 495
+ + G+ YLHS H D+ N+ LLD ++ R KI +F +A + G
Sbjct: 116 ATEFLKQILNGVYYLHSLQI---AHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGN 172
Query: 496 EGEFALTRHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLILEMLTG 541
E ++I GT ++APE + + + D+++ GV+ +L+G
Sbjct: 173 E-----FKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 84/166 (50%), Gaps = 17/166 (10%)
Query: 381 DVSKEIALLNKINHSNLIILSGVCFNEGNCYLVYEYAVNGTLSDWVFSNKNEGKYLDWKQ 440
D+ +E+++L +I H N+I L V N+ + L+ E G L D++ E + L ++
Sbjct: 60 DIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFL----AEKESLTEEE 115
Query: 441 RIQIALDVATGLNYLHSFTNPPHVHKDINSSNV-LLDSDL---RAKIANFAMARPAE-GQ 495
+ + G+ YLHS H D+ N+ LLD ++ R KI +F +A + G
Sbjct: 116 ATEFLKQILNGVYYLHSLQ---IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGN 172
Query: 496 EGEFALTRHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLILEMLTG 541
E ++I GT ++APE + + + D+++ GV+ +L+G
Sbjct: 173 E-----FKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4DCE|B Chain B, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4FOD|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 36
Length = 333
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 55/243 (22%), Positives = 94/243 (38%), Gaps = 45/243 (18%)
Query: 381 DVSKEIALLNKINHSNLIILSGVCFNEGNCYLVYEYAVNGTLSDWVFSNK---NEGKYLD 437
D E +++K NH N++ GV +++ E G L ++ + ++ L
Sbjct: 86 DFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLA 145
Query: 438 WKQRIQIALDVATGLNYLHSFTNPPHVHKDINSSNVLLDSD---LRAKIANFAMARPAEG 494
+ +A D+A G YL +H+DI + N LL AKI +F MAR
Sbjct: 146 MLDLLHVARDIACGCQYLEENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMAR---- 198
Query: 495 QEGEFALTRHIVGTKG--------YMAPEYLENGLVSTKLDVYAFGVLILEMLTGKEAAA 546
+ R KG +M PE G+ ++K D ++FGVL+ E+ +
Sbjct: 199 -----DIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS------ 247
Query: 547 LHAEENNMHLSDVLNAVLTKEDGEESLRHFIDPTLQGNYPLELALLVIRLIDACLKKDPT 606
L + + + F+ + + P V R++ C + P
Sbjct: 248 -------------LGYMPYPSKSNQEVLEFVTSGGRMDPPKNCPGPVYRIMTQCWQHQPE 294
Query: 607 DRP 609
DRP
Sbjct: 295 DRP 297
>pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma
Kinase Catalytic Domain
pdb|4FNY|A Chain A, Crystal Structure Of The R1275q Anaplastic Lymphoma Kinase
Catalytic Domain In Complex With A Benzoxazole Inhibitor
Length = 327
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 61/274 (22%), Positives = 108/274 (39%), Gaps = 52/274 (18%)
Query: 361 GSVYRGKINGGF-------AAIKKVNG--------DVSKEIALLNKINHSNLIILSGVCF 405
G VY G+++G A+K + D E +++K NH N++ GV
Sbjct: 45 GEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSL 104
Query: 406 NEGNCYLVYEYAVNGTLSDWVFSNK---NEGKYLDWKQRIQIALDVATGLNYLHSFTNPP 462
+++ E G L ++ + ++ L + +A D+A G YL
Sbjct: 105 QSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENH--- 161
Query: 463 HVHKDINSSNVLLDSD---LRAKIANFAMA----RPAEGQEGEFALTRHIVGTKGYMAPE 515
+H+DI + N LL AKI +F MA R + ++G A+ +M PE
Sbjct: 162 FIHRDIAARNCLLTCPGPGRVAKIGDFGMAQDIYRASYYRKGGCAML-----PVKWMPPE 216
Query: 516 YLENGLVSTKLDVYAFGVLILEMLTGKEAAALHAEENNMHLSDVLNAVLTKEDGEESLRH 575
G+ ++K D ++FGVL+ E+ + L + + +
Sbjct: 217 AFMEGIFTSKTDTWSFGVLLWEIFS-------------------LGYMPYPSKSNQEVLE 257
Query: 576 FIDPTLQGNYPLELALLVIRLIDACLKKDPTDRP 609
F+ + + P V R++ C + P DRP
Sbjct: 258 FVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRP 291
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 63/256 (24%), Positives = 110/256 (42%), Gaps = 42/256 (16%)
Query: 385 EIALLNKINHS-NLIILSGVCFNEGNCYLV-YEYAVNGTLSDWVFSNKNE--------GK 434
E+ +L I H N++ L G C G +V E+ G LS ++ S +NE
Sbjct: 80 ELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKD 139
Query: 435 YLDWKQRIQIALDVATGLNYLHSFTNPPHVHKDINSSNVLLDSDLRAKIANFAMAR---- 490
+L + I + VA G+ +L S +H+D+ + N+LL KI +F +AR
Sbjct: 140 FLTLEHLICYSFQVAKGMEFLASRKX---IHRDLAARNILLSEKNVVKICDFGLARDIYK 196
Query: 491 -PAEGQEGEFALTRHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLILEMLTGKEAAALHA 549
P ++G+ L +MAPE + + + + + DV++FGVL+ E+ + +
Sbjct: 197 DPDYVRKGDARLPLK------WMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGV 250
Query: 550 EENNMHLSDVLNAVLTKEDGEESLRHFIDPTLQGNYPLELALLVIRLIDACLKKDPTDRP 609
+ + EE R + T + ++D C +P+ RP
Sbjct: 251 KID-----------------EEFCRRLKEGTRMRAPDYTTPEMYQTMLD-CWHGEPSQRP 292
Query: 610 TMYEIEHSLSNILNAS 625
T E+ L N+L A+
Sbjct: 293 TFSELVEHLGNLLQAN 308
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 76/158 (48%), Gaps = 15/158 (9%)
Query: 385 EIALLNKINHSNLIILSGVCFNEGNCYLVYEYAVNGTLSDWVFSN-KNEGKYLDWKQRIQ 443
E +L +N L+ L + N Y+V EYA G + FS+ + G++ + R
Sbjct: 92 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEM----FSHLRRIGRFSEPHARFY 147
Query: 444 IALDVATGLNYLHSFTNPPHVHKDINSSNVLLDSDLRAKIANFAMARPAEGQEGEFALTR 503
A V T YLHS +++D+ N+++D K+ +F A+ +G+ T
Sbjct: 148 AAQIVLT-FEYLHSLD---LIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGR------TW 197
Query: 504 HIVGTKGYMAPEYLENGLVSTKLDVYAFGVLILEMLTG 541
+ GT Y+APE + + + +D +A GVLI EM G
Sbjct: 198 XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 54/189 (28%), Positives = 87/189 (46%), Gaps = 21/189 (11%)
Query: 365 RGKINGGFAAIKKVNGDV---SKEIA-------LLNKINHSNLIILSGVCFNEGNCYLVY 414
+ K G + A+K + +V E+A +L H L L V
Sbjct: 30 KEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFVM 89
Query: 415 EYAVNGTLSDWVFSNKNEGKYLDWKQRIQIALDVATGLNYLHSFTNPPHVHKDINSSNVL 474
EYA G L F E + + + R A ++ + L+YLHS N V++D+ N++
Sbjct: 90 EYANGGEL---FFHLSRERVFSEDRARFYGA-EIVSALDYLHSEKNV--VYRDLKLENLM 143
Query: 475 LDSDLRAKIANFAMARPAEG-QEGEFALTRHIVGTKGYMAPEYLENGLVSTKLDVYAFGV 533
LD D KI +F + + EG ++G A + GT Y+APE LE+ +D + GV
Sbjct: 144 LDKDGHIKITDFGLCK--EGIKDG--ATMKXFCGTPEYLAPEVLEDNDYGRAVDWWGLGV 199
Query: 534 LILEMLTGK 542
++ EM+ G+
Sbjct: 200 VMYEMMCGR 208
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 58/202 (28%), Positives = 95/202 (47%), Gaps = 30/202 (14%)
Query: 361 GSVYRGK--INGG-FAAIKKVNGDVS---------KEIALLNKIN---HSNLIILSGVCF 405
G V++ + NGG F A+K+V +E+A+L + H N++ L VC
Sbjct: 25 GKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCT 84
Query: 406 -----NEGNCYLVYEYAVNGTLSDWVFSNKNEGKYLDWKQRIQIALDVATGLNYLHSFTN 460
E LV+E+ V+ L+ ++ G + + + L GL++LHS
Sbjct: 85 VSRTDRETKLTLVFEH-VDQDLTTYLDKVPEPGVPTETIKDMMFQL--LRGLDFLHSHRV 141
Query: 461 PPHVHKDINSSNVLLDSDLRAKIANFAMARPAEGQEGEFALTRHIVGTKGYMAPEYLENG 520
VH+D+ N+L+ S + K+A+F +AR Q ALT +V T Y APE L
Sbjct: 142 ---VHRDLKPQNILVTSSGQIKLADFGLARIYSFQ---MALT-SVVVTLWYRAPEVLLQS 194
Query: 521 LVSTKLDVYAFGVLILEMLTGK 542
+T +D+++ G + EM K
Sbjct: 195 SYATPVDLWSVGCIFAEMFRRK 216
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 54/189 (28%), Positives = 87/189 (46%), Gaps = 21/189 (11%)
Query: 365 RGKINGGFAAIKKVNGDV---SKEIA-------LLNKINHSNLIILSGVCFNEGNCYLVY 414
+ K G + A+K + +V E+A +L H L L V
Sbjct: 28 KEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFVM 87
Query: 415 EYAVNGTLSDWVFSNKNEGKYLDWKQRIQIALDVATGLNYLHSFTNPPHVHKDINSSNVL 474
EYA G L F E + + + R A ++ + L+YLHS N V++D+ N++
Sbjct: 88 EYANGGEL---FFHLSRERVFSEDRARFYGA-EIVSALDYLHSEKNV--VYRDLKLENLM 141
Query: 475 LDSDLRAKIANFAMARPAEG-QEGEFALTRHIVGTKGYMAPEYLENGLVSTKLDVYAFGV 533
LD D KI +F + + EG ++G A + GT Y+APE LE+ +D + GV
Sbjct: 142 LDKDGHIKITDFGLCK--EGIKDG--ATMKXFCGTPEYLAPEVLEDNDYGRAVDWWGLGV 197
Query: 534 LILEMLTGK 542
++ EM+ G+
Sbjct: 198 VMYEMMCGR 206
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 42/156 (26%), Positives = 79/156 (50%), Gaps = 8/156 (5%)
Query: 385 EIALLNKINHSNLIILSGVCFNEGNCYLVYEYAVNGTLSDWVFSNKNEGKYLDWKQRIQI 444
E ++ ++++ ++ + G+C E + LV E A G L+ ++ N++ K I++
Sbjct: 78 EANVMQQLDNPYIVRMIGICEAE-SWMLVMEMAELGPLNKYLQQNRHVKD----KNIIEL 132
Query: 445 ALDVATGLNYLHSFTNPPHVHKDINSSNVLLDSDLRAKIANFAMARPAEGQEGEFALTRH 504
V+ G+ YL VH+D+ + NVLL + AKI++F +++ E + H
Sbjct: 133 VHQVSMGMKYLEESN---FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTH 189
Query: 505 IVGTKGYMAPEYLENGLVSTKLDVYAFGVLILEMLT 540
+ APE + S+K DV++FGVL+ E +
Sbjct: 190 GKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFS 225
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 42/156 (26%), Positives = 79/156 (50%), Gaps = 8/156 (5%)
Query: 385 EIALLNKINHSNLIILSGVCFNEGNCYLVYEYAVNGTLSDWVFSNKNEGKYLDWKQRIQI 444
E ++ ++++ ++ + G+C E + LV E A G L+ ++ N++ K I++
Sbjct: 78 EANVMQQLDNPYIVRMIGICEAE-SWMLVMEMAELGPLNKYLQQNRHVKD----KNIIEL 132
Query: 445 ALDVATGLNYLHSFTNPPHVHKDINSSNVLLDSDLRAKIANFAMARPAEGQEGEFALTRH 504
V+ G+ YL VH+D+ + NVLL + AKI++F +++ E + H
Sbjct: 133 VHQVSMGMKYLEESN---FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTH 189
Query: 505 IVGTKGYMAPEYLENGLVSTKLDVYAFGVLILEMLT 540
+ APE + S+K DV++FGVL+ E +
Sbjct: 190 GKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFS 225
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 42/169 (24%), Positives = 86/169 (50%), Gaps = 19/169 (11%)
Query: 378 VNGDVSKEIALLNKINHSNLIILSGVCFNEGNCYLVYEYAVNGTLSDWVFSNKNEGKYLD 437
+ + +E+ +L++ N ++ G +++G + E+ G+L D V K G+
Sbjct: 109 IRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSL-DQVL--KKAGRI-- 163
Query: 438 WKQRI--QIALDVATGLNYLHSFTNPPHVHKDINSSNVLLDSDLRAKIANFAMARPAEGQ 495
++I ++++ V GL YL +H+D+ SN+L++S K+ +F G
Sbjct: 164 -PEQILGKVSIAVIKGLTYLREKHK--IMHRDVKPSNILVNSRGEIKLCDF-------GV 213
Query: 496 EGEF--ALTRHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLILEMLTGK 542
G+ ++ VGT+ YM+PE L+ S + D+++ G+ ++EM G+
Sbjct: 214 SGQLIDSMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGR 262
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 76/158 (48%), Gaps = 15/158 (9%)
Query: 385 EIALLNKINHSNLIILSGVCFNEGNCYLVYEYAVNGTLSDWVFSN-KNEGKYLDWKQRIQ 443
E +L +N L+ L + N Y+V EYA G + FS+ + G++ + R
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEM----FSHLRRIGRFSEPHARFY 146
Query: 444 IALDVATGLNYLHSFTNPPHVHKDINSSNVLLDSDLRAKIANFAMARPAEGQEGEFALTR 503
A V T YLHS +++D+ N+++D K+ +F A+ +G+ T
Sbjct: 147 AAQIVLT-FEYLHSLD---LIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGR------TW 196
Query: 504 HIVGTKGYMAPEYLENGLVSTKLDVYAFGVLILEMLTG 541
+ GT Y+APE + + + +D +A GVLI EM G
Sbjct: 197 XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 76/158 (48%), Gaps = 15/158 (9%)
Query: 385 EIALLNKINHSNLIILSGVCFNEGNCYLVYEYAVNGTLSDWVFSN-KNEGKYLDWKQRIQ 443
E + +N L+ L + N Y+V EYA G + FS+ + G++ + R
Sbjct: 92 EKRIQQAVNFPFLVKLEFSFKDNSNLYMVLEYAPGGEM----FSHLRRIGRFSEPHARFY 147
Query: 444 IALDVATGLNYLHSFTNPPHVHKDINSSNVLLDSDLRAKIANFAMARPAEGQEGEFALTR 503
A V T YLHS +++D+ N+L+D K+A+F A+ +G+ T
Sbjct: 148 AAQIVLT-FEYLHSLD---LIYRDLKPENLLIDQQGYIKVADFGFAKRVKGR------TW 197
Query: 504 HIVGTKGYMAPEYLENGLVSTKLDVYAFGVLILEMLTG 541
+ GT Y+APE + + + +D +A GVLI EM G
Sbjct: 198 XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 45/150 (30%), Positives = 75/150 (50%), Gaps = 12/150 (8%)
Query: 411 YLVYEYAVNGTLSDWVFSNKNEGKYLDWKQRIQIALDVATGLNYLHSFTNPPHVHKDINS 470
Y V EY VNG D ++ + G++ + + A ++A GL +L S +++D+
Sbjct: 418 YFVMEY-VNG--GDLMYHIQQVGRFKE-PHAVFYAAEIAIGLFFLQSKGI---IYRDLKL 470
Query: 471 SNVLLDSDLRAKIANFAMARPAEGQEGEFALTRHIVGTKGYMAPEYLENGLVSTKLDVYA 530
NV+LDS+ KIA+F M + + T+ GT Y+APE + +D +A
Sbjct: 471 DNVMLDSEGHIKIADFGMCKE---NIWDGVTTKXFCGTPDYIAPEIIAYQPYGKSVDWWA 527
Query: 531 FGVLILEMLTGKEAAALHAEENNMHLSDVL 560
FGVL+ EML G+ A E+ + ++
Sbjct: 528 FGVLLYEMLAGQ--APFEGEDEDELFQSIM 555
>pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 1
pdb|4FOC|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 2
Length = 353
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 62/278 (22%), Positives = 106/278 (38%), Gaps = 60/278 (21%)
Query: 361 GSVYRGKINGGF-------AAIKKVNG--------DVSKEIALLNKINHSNLIILSGVCF 405
G VY G+++G A+K + D E +++K NH N++ GV
Sbjct: 71 GEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSL 130
Query: 406 NEGNCYLVYEYAVNGTLSDWVFSNK---NEGKYLDWKQRIQIALDVATGLNYLHSFTNPP 462
+++ E G L ++ + ++ L + +A D+A G YL
Sbjct: 131 QSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENH--- 187
Query: 463 HVHKDINSSNVLLDSD---LRAKIANFAMARPAEGQEGEFALTRHIVGTKG--------Y 511
+H+DI + N LL AKI +F MAR + R KG +
Sbjct: 188 FIHRDIAARNCLLTCPGPGRVAKIGDFGMAR---------DIYRASYYRKGGCAMLPVKW 238
Query: 512 MAPEYLENGLVSTKLDVYAFGVLILEMLTGKEAAALHAEENNMHLSDVLNAVLTKEDGEE 571
M PE G+ ++K D ++FGVL+ E+ + L + +
Sbjct: 239 MPPEAFMEGIFTSKTDTWSFGVLLWEIFS-------------------LGYMPYPSKSNQ 279
Query: 572 SLRHFIDPTLQGNYPLELALLVIRLIDACLKKDPTDRP 609
+ F+ + + P V R++ C + P DRP
Sbjct: 280 EVLEFVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRP 317
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 42/156 (26%), Positives = 80/156 (51%), Gaps = 8/156 (5%)
Query: 385 EIALLNKINHSNLIILSGVCFNEGNCYLVYEYAVNGTLSDWVFSNKNEGKYLDWKQRIQI 444
E ++ ++++ ++ + G+C E + LV E A G L+ ++ N+ ++ K I++
Sbjct: 76 EANVMQQLDNPYIVRMIGICEAE-SWMLVMEMAELGPLNKYLQQNR----HVKDKNIIEL 130
Query: 445 ALDVATGLNYLHSFTNPPHVHKDINSSNVLLDSDLRAKIANFAMARPAEGQEGEFALTRH 504
V+ G+ YL VH+D+ + NVLL + AKI++F +++ E + H
Sbjct: 131 VHQVSMGMKYLEESN---FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTH 187
Query: 505 IVGTKGYMAPEYLENGLVSTKLDVYAFGVLILEMLT 540
+ APE + S+K DV++FGVL+ E +
Sbjct: 188 GKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFS 223
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 47/159 (29%), Positives = 77/159 (48%), Gaps = 13/159 (8%)
Query: 404 CFNE-GNCYLVYEYAVNGTLSDWVFSNKNEGKYLDWKQRIQIALDVATGLNYLHSFTNPP 462
CF Y V EY VNG D ++ + G++ + + A ++A GL +L S
Sbjct: 89 CFQTMDRLYFVMEY-VNG--GDLMYHIQQVGRFKE-PHAVFYAAEIAIGLFFLQS---KG 141
Query: 463 HVHKDINSSNVLLDSDLRAKIANFAMARPAEGQEGEFALTRHIVGTKGYMAPEYLENGLV 522
+++D+ NV+LDS+ KIA+F M + + T+ GT Y+APE +
Sbjct: 142 IIYRDLKLDNVMLDSEGHIKIADFGMCKE---NIWDGVTTKXFCGTPDYIAPEIIAYQPY 198
Query: 523 STKLDVYAFGVLILEMLTGKEAAALHAEENNMHLSDVLN 561
+D +AFGVL+ EML G+ A E+ + ++
Sbjct: 199 GKSVDWWAFGVLLYEMLAGQ--APFEGEDEDELFQSIME 235
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 84/166 (50%), Gaps = 17/166 (10%)
Query: 381 DVSKEIALLNKINHSNLIILSGVCFNEGNCYLVYEYAVNGTLSDWVFSNKNEGKYLDWKQ 440
D+ +E+++L +I H N+I L V N+ + L+ E G L D++ E + L ++
Sbjct: 60 DIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFL----AEKESLTEEE 115
Query: 441 RIQIALDVATGLNYLHSFTNPPHVHKDINSSNV-LLDSDL---RAKIANFAMARPAE-GQ 495
+ + G+ YLHS H D+ N+ LLD ++ R KI +F +A + G
Sbjct: 116 ATEFLKQILNGVYYLHSLQ---IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGN 172
Query: 496 EGEFALTRHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLILEMLTG 541
E ++I GT ++APE + + + D+++ GV+ +L+G
Sbjct: 173 E-----FKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 86/170 (50%), Gaps = 20/170 (11%)
Query: 377 KVNGDVSKEIALLNKINHSNLIILSGVCFNEGNCYLVYEYAVNGTLSDWVFSNKNE--GK 434
K N ++ E ++ +++ ++ L G+C L+ + G L D+V +K+ +
Sbjct: 63 KANKEILDEAYVMASVDNPHVCRLLGICLT-STVQLIMQLMPFGCLLDYVREHKDNIGSQ 121
Query: 435 YL-DWKQRIQIALDVATGLNYLHSFTNPPHVHKDINSSNVLLDSDLRAKIANFAMARPAE 493
YL +W + +A G+NYL VH+D+ + NVL+ + KI +F +A+
Sbjct: 122 YLLNW------CVQIAKGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLG 172
Query: 494 GQEGEFALTRHIVGTK---GYMAPEYLENGLVSTKLDVYAFGVLILEMLT 540
+E E+ H G K +MA E + + + + + DV+++GV + E++T
Sbjct: 173 AEEKEY----HAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 218
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 58/202 (28%), Positives = 95/202 (47%), Gaps = 30/202 (14%)
Query: 361 GSVYRGK--INGG-FAAIKKVNGDVS---------KEIALLNKIN---HSNLIILSGVCF 405
G V++ + NGG F A+K+V +E+A+L + H N++ L VC
Sbjct: 25 GKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCT 84
Query: 406 -----NEGNCYLVYEYAVNGTLSDWVFSNKNEGKYLDWKQRIQIALDVATGLNYLHSFTN 460
E LV+E+ V+ L+ ++ G + + + L GL++LHS
Sbjct: 85 VSRTDRETKLTLVFEH-VDQDLTTYLDKVPEPGVPTETIKDMMFQL--LRGLDFLHSHRV 141
Query: 461 PPHVHKDINSSNVLLDSDLRAKIANFAMARPAEGQEGEFALTRHIVGTKGYMAPEYLENG 520
VH+D+ N+L+ S + K+A+F +AR Q ALT +V T Y APE L
Sbjct: 142 ---VHRDLKPQNILVTSSGQIKLADFGLARIYSFQ---MALT-SVVVTLWYRAPEVLLQS 194
Query: 521 LVSTKLDVYAFGVLILEMLTGK 542
+T +D+++ G + EM K
Sbjct: 195 SYATPVDLWSVGCIFAEMFRRK 216
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 54/189 (28%), Positives = 87/189 (46%), Gaps = 21/189 (11%)
Query: 365 RGKINGGFAAIKKVNGDV---SKEIA-------LLNKINHSNLIILSGVCFNEGNCYLVY 414
+ K G + A+K + +V E+A +L H L L V
Sbjct: 29 KEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFVM 88
Query: 415 EYAVNGTLSDWVFSNKNEGKYLDWKQRIQIALDVATGLNYLHSFTNPPHVHKDINSSNVL 474
EYA G L F E + + + R A ++ + L+YLHS N V++D+ N++
Sbjct: 89 EYANGGEL---FFHLSRERVFSEDRARFYGA-EIVSALDYLHSEKNV--VYRDLKLENLM 142
Query: 475 LDSDLRAKIANFAMARPAEG-QEGEFALTRHIVGTKGYMAPEYLENGLVSTKLDVYAFGV 533
LD D KI +F + + EG ++G A + GT Y+APE LE+ +D + GV
Sbjct: 143 LDKDGHIKITDFGLCK--EGIKDG--ATMKXFCGTPEYLAPEVLEDNDYGRAVDWWGLGV 198
Query: 534 LILEMLTGK 542
++ EM+ G+
Sbjct: 199 VMYEMMCGR 207
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 42/156 (26%), Positives = 79/156 (50%), Gaps = 8/156 (5%)
Query: 385 EIALLNKINHSNLIILSGVCFNEGNCYLVYEYAVNGTLSDWVFSNKNEGKYLDWKQRIQI 444
E ++ ++++ ++ + G+C E + LV E A G L+ ++ N++ K I++
Sbjct: 62 EANVMQQLDNPYIVRMIGICEAE-SWMLVMEMAELGPLNKYLQQNRHVKD----KNIIEL 116
Query: 445 ALDVATGLNYLHSFTNPPHVHKDINSSNVLLDSDLRAKIANFAMARPAEGQEGEFALTRH 504
V+ G+ YL VH+D+ + NVLL + AKI++F +++ E + H
Sbjct: 117 VHQVSMGMKYLEESN---FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTH 173
Query: 505 IVGTKGYMAPEYLENGLVSTKLDVYAFGVLILEMLT 540
+ APE + S+K DV++FGVL+ E +
Sbjct: 174 GKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFS 209
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 86/170 (50%), Gaps = 20/170 (11%)
Query: 377 KVNGDVSKEIALLNKINHSNLIILSGVCFNEGNCYLVYEYAVNGTLSDWVFSNKNE--GK 434
K N ++ E ++ +++ ++ L G+C L+ + G L D+V +K+ +
Sbjct: 60 KANKEILDEAYVMASVDNPHVCRLLGICLT-STVQLIMQLMPFGXLLDYVREHKDNIGSQ 118
Query: 435 YL-DWKQRIQIALDVATGLNYLHSFTNPPHVHKDINSSNVLLDSDLRAKIANFAMARPAE 493
YL +W + +A G+NYL VH+D+ + NVL+ + KI +F +A+
Sbjct: 119 YLLNW------CVQIAKGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLG 169
Query: 494 GQEGEFALTRHIVGTK---GYMAPEYLENGLVSTKLDVYAFGVLILEMLT 540
+E E+ H G K +MA E + + + + + DV+++GV + E++T
Sbjct: 170 AEEKEY----HAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 215
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 86/170 (50%), Gaps = 20/170 (11%)
Query: 377 KVNGDVSKEIALLNKINHSNLIILSGVCFNEGNCYLVYEYAVNGTLSDWVFSNKNE--GK 434
K N ++ E ++ +++ ++ L G+C L+ + G L D+V +K+ +
Sbjct: 60 KANKEILDEAYVMASVDNPHVCRLLGICLT-STVQLIMQLMPFGCLLDYVREHKDNIGSQ 118
Query: 435 YL-DWKQRIQIALDVATGLNYLHSFTNPPHVHKDINSSNVLLDSDLRAKIANFAMARPAE 493
YL +W + +A G+NYL VH+D+ + NVL+ + KI +F +A+
Sbjct: 119 YLLNW------CVQIAKGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLG 169
Query: 494 GQEGEFALTRHIVGTK---GYMAPEYLENGLVSTKLDVYAFGVLILEMLT 540
+E E+ H G K +MA E + + + + + DV+++GV + E++T
Sbjct: 170 AEEKEY----HAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 215
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 86/170 (50%), Gaps = 20/170 (11%)
Query: 377 KVNGDVSKEIALLNKINHSNLIILSGVCFNEGNCYLVYEYAVNGTLSDWVFSNKNE--GK 434
K N ++ E ++ +++ ++ L G+C L+ + G L D+V +K+ +
Sbjct: 59 KANKEILDEAYVMASVDNPHVCRLLGICLT-STVQLIMQLMPFGCLLDYVREHKDNIGSQ 117
Query: 435 YL-DWKQRIQIALDVATGLNYLHSFTNPPHVHKDINSSNVLLDSDLRAKIANFAMARPAE 493
YL +W + +A G+NYL VH+D+ + NVL+ + KI +F +A+
Sbjct: 118 YLLNW------CVQIAKGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLG 168
Query: 494 GQEGEFALTRHIVGTK---GYMAPEYLENGLVSTKLDVYAFGVLILEMLT 540
+E E+ H G K +MA E + + + + + DV+++GV + E++T
Sbjct: 169 AEEKEY----HAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 214
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 58/202 (28%), Positives = 95/202 (47%), Gaps = 30/202 (14%)
Query: 361 GSVYRGK--INGG-FAAIKKVNGDVS---------KEIALLNKIN---HSNLIILSGVCF 405
G V++ + NGG F A+K+V +E+A+L + H N++ L VC
Sbjct: 25 GKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCT 84
Query: 406 -----NEGNCYLVYEYAVNGTLSDWVFSNKNEGKYLDWKQRIQIALDVATGLNYLHSFTN 460
E LV+E+ V+ L+ ++ G + + + L GL++LHS
Sbjct: 85 VSRTDRETKLTLVFEH-VDQDLTTYLDKVPEPGVPTETIKDMMFQL--LRGLDFLHSHRV 141
Query: 461 PPHVHKDINSSNVLLDSDLRAKIANFAMARPAEGQEGEFALTRHIVGTKGYMAPEYLENG 520
VH+D+ N+L+ S + K+A+F +AR Q ALT +V T Y APE L
Sbjct: 142 ---VHRDLKPQNILVTSSGQIKLADFGLARIYSFQ---MALT-SVVVTLWYRAPEVLLQS 194
Query: 521 LVSTKLDVYAFGVLILEMLTGK 542
+T +D+++ G + EM K
Sbjct: 195 SYATPVDLWSVGCIFAEMFRRK 216
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 86/170 (50%), Gaps = 20/170 (11%)
Query: 377 KVNGDVSKEIALLNKINHSNLIILSGVCFNEGNCYLVYEYAVNGTLSDWVFSNKNE--GK 434
K N ++ E ++ +++ ++ L G+C L+ + G L D+V +K+ +
Sbjct: 93 KANKEILDEAYVMASVDNPHVCRLLGICLT-STVQLITQLMPFGCLLDYVREHKDNIGSQ 151
Query: 435 YL-DWKQRIQIALDVATGLNYLHSFTNPPHVHKDINSSNVLLDSDLRAKIANFAMARPAE 493
YL +W + +A G+NYL VH+D+ + NVL+ + KI +F +A+
Sbjct: 152 YLLNW------CVQIAKGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLG 202
Query: 494 GQEGEFALTRHIVGTK---GYMAPEYLENGLVSTKLDVYAFGVLILEMLT 540
+E E+ H G K +MA E + + + + + DV+++GV + E++T
Sbjct: 203 AEEKEY----HAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 248
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 86/170 (50%), Gaps = 20/170 (11%)
Query: 377 KVNGDVSKEIALLNKINHSNLIILSGVCFNEGNCYLVYEYAVNGTLSDWVFSNKNE--GK 434
K N ++ E ++ +++ ++ L G+C L+ + G L D+V +K+ +
Sbjct: 61 KANKEILDEAYVMASVDNPHVCRLLGICLT-STVQLIMQLMPFGCLLDYVREHKDNIGSQ 119
Query: 435 YL-DWKQRIQIALDVATGLNYLHSFTNPPHVHKDINSSNVLLDSDLRAKIANFAMARPAE 493
YL +W + +A G+NYL VH+D+ + NVL+ + KI +F +A+
Sbjct: 120 YLLNW------CVQIAKGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLG 170
Query: 494 GQEGEFALTRHIVGTK---GYMAPEYLENGLVSTKLDVYAFGVLILEMLT 540
+E E+ H G K +MA E + + + + + DV+++GV + E++T
Sbjct: 171 AEEKEY----HAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 216
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 56/244 (22%), Positives = 120/244 (49%), Gaps = 34/244 (13%)
Query: 378 VNGDVSKEIALLNKINHSNLIILSGVCFNEGNCYLVYEYAVNGTLSDWVFSNKNEGKYLD 437
+ + +E+ +L++ N ++ G +++G + E+ G+L D V K G+
Sbjct: 47 IRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSL-DQVL--KKAGRI-- 101
Query: 438 WKQRI--QIALDVATGLNYLHSFTNPPHVHKDINSSNVLLDSDLRAKIANFAMARPAEGQ 495
++I ++++ V GL YL +H+D+ SN+L++S K+ +F ++ GQ
Sbjct: 102 -PEQILGKVSIAVIKGLTYLREKHK--IMHRDVKPSNILVNSRGEIKLCDFGVS----GQ 154
Query: 496 EGEFALTRHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLILEMLTGK-EAAALHAEENN- 553
+ ++ VGT+ YM+PE L+ S + D+++ G+ ++EM G+ A+E++
Sbjct: 155 LID-SMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKEDSR 213
Query: 554 --MHLSDVLNAVLTKEDGEESLRHFIDPTL-QGNYPLELALLVIRLIDACLKKDPTDRPT 610
M + ++L+ ++ + P L G + LE ++ CL K+P +R
Sbjct: 214 PPMAIFELLDYIVNEP----------PPKLPSGVFSLEFQ----DFVNKCLIKNPAERAD 259
Query: 611 MYEI 614
+ ++
Sbjct: 260 LKQL 263
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 84/166 (50%), Gaps = 17/166 (10%)
Query: 381 DVSKEIALLNKINHSNLIILSGVCFNEGNCYLVYEYAVNGTLSDWVFSNKNEGKYLDWKQ 440
D+ +E+++L +I H N+I L V N+ + L+ E G L D++ E + L ++
Sbjct: 60 DIEREVSILKEIQHPNVITLHEVYENKTDVILIGELVAGGELFDFL----AEKESLTEEE 115
Query: 441 RIQIALDVATGLNYLHSFTNPPHVHKDINSSNV-LLDSDL---RAKIANFAMARPAE-GQ 495
+ + G+ YLHS H D+ N+ LLD ++ R KI +F +A + G
Sbjct: 116 ATEFLKQILNGVYYLHSLQI---AHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGN 172
Query: 496 EGEFALTRHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLILEMLTG 541
E ++I GT ++APE + + + D+++ GV+ +L+G
Sbjct: 173 E-----FKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 42/156 (26%), Positives = 80/156 (51%), Gaps = 8/156 (5%)
Query: 385 EIALLNKINHSNLIILSGVCFNEGNCYLVYEYAVNGTLSDWVFSNKNEGKYLDWKQRIQI 444
E ++ ++++ ++ + G+C E + LV E A G L+ ++ N+ ++ K I++
Sbjct: 68 EANVMQQLDNPYIVRMIGICEAE-SWMLVMEMAELGPLNKYLQQNR----HVKDKNIIEL 122
Query: 445 ALDVATGLNYLHSFTNPPHVHKDINSSNVLLDSDLRAKIANFAMARPAEGQEGEFALTRH 504
V+ G+ YL VH+D+ + NVLL + AKI++F +++ E + H
Sbjct: 123 VHQVSMGMKYLEESN---FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTH 179
Query: 505 IVGTKGYMAPEYLENGLVSTKLDVYAFGVLILEMLT 540
+ APE + S+K DV++FGVL+ E +
Sbjct: 180 GKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFS 215
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 42/156 (26%), Positives = 79/156 (50%), Gaps = 8/156 (5%)
Query: 385 EIALLNKINHSNLIILSGVCFNEGNCYLVYEYAVNGTLSDWVFSNKNEGKYLDWKQRIQI 444
E ++ ++++ ++ + G+C E + LV E A G L+ ++ N++ K I++
Sbjct: 58 EANVMQQLDNPYIVRMIGICEAE-SWMLVMEMAELGPLNKYLQQNRHVKD----KNIIEL 112
Query: 445 ALDVATGLNYLHSFTNPPHVHKDINSSNVLLDSDLRAKIANFAMARPAEGQEGEFALTRH 504
V+ G+ YL VH+D+ + NVLL + AKI++F +++ E + H
Sbjct: 113 VHQVSMGMKYLEESN---FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTH 169
Query: 505 IVGTKGYMAPEYLENGLVSTKLDVYAFGVLILEMLT 540
+ APE + S+K DV++FGVL+ E +
Sbjct: 170 GKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFS 205
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 86/170 (50%), Gaps = 20/170 (11%)
Query: 377 KVNGDVSKEIALLNKINHSNLIILSGVCFNEGNCYLVYEYAVNGTLSDWVFSNKNE--GK 434
K N ++ E ++ +++ ++ L G+C L+ + G L D+V +K+ +
Sbjct: 66 KANKEILDEAYVMASVDNPHVCRLLGICLT-STVQLIMQLMPFGCLLDYVREHKDNIGSQ 124
Query: 435 YL-DWKQRIQIALDVATGLNYLHSFTNPPHVHKDINSSNVLLDSDLRAKIANFAMARPAE 493
YL +W + +A G+NYL VH+D+ + NVL+ + KI +F +A+
Sbjct: 125 YLLNW------CVQIAKGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLG 175
Query: 494 GQEGEFALTRHIVGTK---GYMAPEYLENGLVSTKLDVYAFGVLILEMLT 540
+E E+ H G K +MA E + + + + + DV+++GV + E++T
Sbjct: 176 AEEKEY----HAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 221
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 86/170 (50%), Gaps = 20/170 (11%)
Query: 377 KVNGDVSKEIALLNKINHSNLIILSGVCFNEGNCYLVYEYAVNGTLSDWVFSNKNE--GK 434
K N ++ E ++ +++ ++ L G+C L+ + G L D+V +K+ +
Sbjct: 62 KANKEILDEAYVMASVDNPHVCRLLGICLT-STVQLIMQLMPFGCLLDYVREHKDNIGSQ 120
Query: 435 YL-DWKQRIQIALDVATGLNYLHSFTNPPHVHKDINSSNVLLDSDLRAKIANFAMARPAE 493
YL +W + +A G+NYL VH+D+ + NVL+ + KI +F +A+
Sbjct: 121 YLLNW------CVQIAKGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLG 171
Query: 494 GQEGEFALTRHIVGTK---GYMAPEYLENGLVSTKLDVYAFGVLILEMLT 540
+E E+ H G K +MA E + + + + + DV+++GV + E++T
Sbjct: 172 AEEKEY----HAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 217
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 45/158 (28%), Positives = 75/158 (47%), Gaps = 15/158 (9%)
Query: 385 EIALLNKINHSNLIILSGVCFNEGNCYLVYEYAVNGTLSDWVFSN-KNEGKYLDWKQRIQ 443
E +L +N L+ L + N Y+V EY G + FS+ + G++ + R
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEM----FSHLRRIGRFXEPHARFY 146
Query: 444 IALDVATGLNYLHSFTNPPHVHKDINSSNVLLDSDLRAKIANFAMARPAEGQEGEFALTR 503
A V T YLHS +++D+ N+L+D ++ +F A+ +G+ T
Sbjct: 147 AAQIVLT-FEYLHSLD---LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR------TW 196
Query: 504 HIVGTKGYMAPEYLENGLVSTKLDVYAFGVLILEMLTG 541
+ GT Y+APE + + + +D +A GVLI EM G
Sbjct: 197 XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 42/156 (26%), Positives = 79/156 (50%), Gaps = 8/156 (5%)
Query: 385 EIALLNKINHSNLIILSGVCFNEGNCYLVYEYAVNGTLSDWVFSNKNEGKYLDWKQRIQI 444
E ++ ++++ ++ + G+C E + LV E A G L+ ++ N++ K I++
Sbjct: 56 EANVMQQLDNPYIVRMIGICEAE-SWMLVMEMAELGPLNKYLQQNRHVKD----KNIIEL 110
Query: 445 ALDVATGLNYLHSFTNPPHVHKDINSSNVLLDSDLRAKIANFAMARPAEGQEGEFALTRH 504
V+ G+ YL VH+D+ + NVLL + AKI++F +++ E + H
Sbjct: 111 VHQVSMGMKYLEESN---FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTH 167
Query: 505 IVGTKGYMAPEYLENGLVSTKLDVYAFGVLILEMLT 540
+ APE + S+K DV++FGVL+ E +
Sbjct: 168 GKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFS 203
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 64/257 (24%), Positives = 111/257 (43%), Gaps = 40/257 (15%)
Query: 363 VYRGKINGGFAAIKKVNGD-VSKEIALLNKINHSNLIILSGVCFNEGNCYLVYEYAVNGT 421
V+ GK+ +K + +S EIA+ +++ +++ G ++ Y+V E +
Sbjct: 69 VFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGFHGFFEDDDFVYVVLEICRRRS 128
Query: 422 LSDWVFSNK----NEGKYLDWKQRIQIALDVATGLNYLHSFTNPPHVHKDINSSNVLLDS 477
L + K E +Y +Q IQ G+ YLH N +H+D+ N+ L+
Sbjct: 129 LLELHKRRKAVTEPEARYF-MRQTIQ-------GVQYLH---NNRVIHRDLKLGNLFLND 177
Query: 478 DLRAKIANFAMARPAEGQEGEFALTRHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLILE 537
D+ KI +F +A E +GE T + GT Y+APE L S ++D+++ G ++
Sbjct: 178 DMDVKIGDFGLATKIEF-DGERKKT--LCGTPNYIAPEVLCKKGHSFEVDIWSLGCILYT 234
Query: 538 MLTGKEAAALHAEENNMHLSDVLNAVLTKEDGEESLRHFIDPTLQGNYPLELALLVIRLI 597
+L GK S + + + E S+ I+P LI
Sbjct: 235 LLVGKPP---------FETSCLKETYIRIKKNEYSVPRHINPVASA------------LI 273
Query: 598 DACLKKDPTDRPTMYEI 614
L DPT RP++ E+
Sbjct: 274 RRMLHADPTLRPSVAEL 290
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 86/170 (50%), Gaps = 20/170 (11%)
Query: 377 KVNGDVSKEIALLNKINHSNLIILSGVCFNEGNCYLVYEYAVNGTLSDWVFSNKNE--GK 434
K N ++ E ++ +++ ++ L G+C L+ + G L D+V +K+ +
Sbjct: 69 KANKEILDEAYVMASVDNPHVCRLLGICLT-STVQLITQLMPFGCLLDYVREHKDNIGSQ 127
Query: 435 YL-DWKQRIQIALDVATGLNYLHSFTNPPHVHKDINSSNVLLDSDLRAKIANFAMARPAE 493
YL +W + +A G+NYL VH+D+ + NVL+ + KI +F +A+
Sbjct: 128 YLLNW------CVQIAKGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLG 178
Query: 494 GQEGEFALTRHIVGTK---GYMAPEYLENGLVSTKLDVYAFGVLILEMLT 540
+E E+ H G K +MA E + + + + + DV+++GV + E++T
Sbjct: 179 AEEKEY----HAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 224
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 86/170 (50%), Gaps = 20/170 (11%)
Query: 377 KVNGDVSKEIALLNKINHSNLIILSGVCFNEGNCYLVYEYAVNGTLSDWVFSNKNE--GK 434
K N ++ E ++ +++ ++ L G+C L+ + G L D+V +K+ +
Sbjct: 59 KANKEILDEAYVMASVDNPHVCRLLGICLT-STVQLITQLMPFGCLLDYVREHKDNIGSQ 117
Query: 435 YL-DWKQRIQIALDVATGLNYLHSFTNPPHVHKDINSSNVLLDSDLRAKIANFAMARPAE 493
YL +W + +A G+NYL VH+D+ + NVL+ + KI +F +A+
Sbjct: 118 YLLNW------CVQIAKGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLG 168
Query: 494 GQEGEFALTRHIVGTK---GYMAPEYLENGLVSTKLDVYAFGVLILEMLT 540
+E E+ H G K +MA E + + + + + DV+++GV + E++T
Sbjct: 169 AEEKEY----HAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 214
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 63/259 (24%), Positives = 110/259 (42%), Gaps = 45/259 (17%)
Query: 385 EIALLNKINHS-NLIILSGVCFNEGNCYLV-YEYAVNGTLSDWVFSNKNE---------- 432
E+ +L I H N++ L G C G +V E+ G LS ++ S +NE
Sbjct: 81 ELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTPEDL 140
Query: 433 -GKYLDWKQRIQIALDVATGLNYLHSFTNPPHVHKDINSSNVLLDSDLRAKIANFAMAR- 490
+L + I + VA G+ +L S +H+D+ + N+LL KI +F +AR
Sbjct: 141 YKDFLTLEHLICYSFQVAKGMEFLASRKC---IHRDLAARNILLSEKNVVKICDFGLARD 197
Query: 491 ----PAEGQEGEFALTRHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLILEMLTGKEAAA 546
P ++G+ L +MAPE + + + + + DV++FGVL+ E+ + +
Sbjct: 198 IXKDPDXVRKGDARLPLK------WMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPY 251
Query: 547 LHAEENNMHLSDVLNAVLTKEDGEESLRHFIDPTLQGNYPLELALLVIRLIDACLKKDPT 606
+ + EE R + T + ++D C +P+
Sbjct: 252 PGVKID-----------------EEFCRRLKEGTRMRAPDYTTPEMYQTMLD-CWHGEPS 293
Query: 607 DRPTMYEIEHSLSNILNAS 625
RPT E+ L N+L A+
Sbjct: 294 QRPTFSELVEHLGNLLQAN 312
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 45/158 (28%), Positives = 75/158 (47%), Gaps = 15/158 (9%)
Query: 385 EIALLNKINHSNLIILSGVCFNEGNCYLVYEYAVNGTLSDWVFSN-KNEGKYLDWKQRIQ 443
E +L +N L+ L + N Y+V EY G + FS+ + G++ + R
Sbjct: 112 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEM----FSHLRRIGRFXEPHARFY 167
Query: 444 IALDVATGLNYLHSFTNPPHVHKDINSSNVLLDSDLRAKIANFAMARPAEGQEGEFALTR 503
A V T YLHS +++D+ N+L+D ++ +F A+ +G+ T
Sbjct: 168 AAQIVLT-FEYLHSLD---LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR------TW 217
Query: 504 HIVGTKGYMAPEYLENGLVSTKLDVYAFGVLILEMLTG 541
+ GT Y+APE + + + +D +A GVLI EM G
Sbjct: 218 XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 255
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 86/170 (50%), Gaps = 20/170 (11%)
Query: 377 KVNGDVSKEIALLNKINHSNLIILSGVCFNEGNCYLVYEYAVNGTLSDWVFSNKNE--GK 434
K N ++ E ++ +++ ++ L G+C L+ + G L D+V +K+ +
Sbjct: 59 KANKEILDEAYVMASVDNPHVCRLLGICLT-STVQLITQLMPFGCLLDYVREHKDNIGSQ 117
Query: 435 YL-DWKQRIQIALDVATGLNYLHSFTNPPHVHKDINSSNVLLDSDLRAKIANFAMARPAE 493
YL +W + +A G+NYL VH+D+ + NVL+ + KI +F +A+
Sbjct: 118 YLLNW------CVQIAKGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLG 168
Query: 494 GQEGEFALTRHIVGTK---GYMAPEYLENGLVSTKLDVYAFGVLILEMLT 540
+E E+ H G K +MA E + + + + + DV+++GV + E++T
Sbjct: 169 AEEKEY----HAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 214
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 45/158 (28%), Positives = 77/158 (48%), Gaps = 15/158 (9%)
Query: 385 EIALLNKINHSNLIILSGVCFNEGNCYLVYEYAVNGTLSDWVFSN-KNEGKYLDWKQRIQ 443
E +L +N L+ L + N Y+V EYA G + FS+ + G++ + R
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEM----FSHLRRIGRFSEPHARFY 146
Query: 444 IALDVATGLNYLHSFTNPPHVHKDINSSNVLLDSDLRAKIANFAMARPAEGQEGEFALTR 503
A V T YLHS +++D+ N+++D ++ +F +A+ +G+ T
Sbjct: 147 AAQIVLT-FEYLHSLD---LIYRDLKPENLMIDQQGYIQVTDFGLAKRVKGR------TW 196
Query: 504 HIVGTKGYMAPEYLENGLVSTKLDVYAFGVLILEMLTG 541
+ GT Y+APE + + + +D +A GVLI EM G
Sbjct: 197 XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 86/170 (50%), Gaps = 20/170 (11%)
Query: 377 KVNGDVSKEIALLNKINHSNLIILSGVCFNEGNCYLVYEYAVNGTLSDWVFSNKNE--GK 434
K N ++ E ++ +++ ++ L G+C L+ + G L D+V +K+ +
Sbjct: 59 KANKEILDEAYVMASVDNPHVCRLLGICLT-STVQLITQLMPFGXLLDYVREHKDNIGSQ 117
Query: 435 YL-DWKQRIQIALDVATGLNYLHSFTNPPHVHKDINSSNVLLDSDLRAKIANFAMARPAE 493
YL +W + +A G+NYL VH+D+ + NVL+ + KI +F +A+
Sbjct: 118 YLLNW------CVQIAKGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLG 168
Query: 494 GQEGEFALTRHIVGTK---GYMAPEYLENGLVSTKLDVYAFGVLILEMLT 540
+E E+ H G K +MA E + + + + + DV+++GV + E++T
Sbjct: 169 AEEKEY----HAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 214
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 86/170 (50%), Gaps = 20/170 (11%)
Query: 377 KVNGDVSKEIALLNKINHSNLIILSGVCFNEGNCYLVYEYAVNGTLSDWVFSNKNE--GK 434
K N ++ E ++ +++ ++ L G+C L+ + G L D+V +K+ +
Sbjct: 66 KANKEILDEAYVMASVDNPHVCRLLGICLT-STVQLITQLMPFGCLLDYVREHKDNIGSQ 124
Query: 435 YL-DWKQRIQIALDVATGLNYLHSFTNPPHVHKDINSSNVLLDSDLRAKIANFAMARPAE 493
YL +W + +A G+NYL VH+D+ + NVL+ + KI +F +A+
Sbjct: 125 YLLNW------CVQIAKGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLG 175
Query: 494 GQEGEFALTRHIVGTK---GYMAPEYLENGLVSTKLDVYAFGVLILEMLT 540
+E E+ H G K +MA E + + + + + DV+++GV + E++T
Sbjct: 176 AEEKEY----HAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 221
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 75/158 (47%), Gaps = 15/158 (9%)
Query: 385 EIALLNKINHSNLIILSGVCFNEGNCYLVYEYAVNGTLSDWVFSN-KNEGKYLDWKQRIQ 443
E +L +N L L + N Y+V EYA G + FS+ + G++ + R
Sbjct: 92 EKRILQAVNFPFLTKLEFSFKDNSNLYMVMEYAPGGEM----FSHLRRIGRFXEPHARFY 147
Query: 444 IALDVATGLNYLHSFTNPPHVHKDINSSNVLLDSDLRAKIANFAMARPAEGQEGEFALTR 503
A V T YLHS +++D+ N+++D K+ +F A+ +G+ T
Sbjct: 148 AAQIVLT-FEYLHSLD---LIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGR------TW 197
Query: 504 HIVGTKGYMAPEYLENGLVSTKLDVYAFGVLILEMLTG 541
+ GT Y+APE + + + +D +A GVLI EM G
Sbjct: 198 XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 45/158 (28%), Positives = 75/158 (47%), Gaps = 15/158 (9%)
Query: 385 EIALLNKINHSNLIILSGVCFNEGNCYLVYEYAVNGTLSDWVFSN-KNEGKYLDWKQRIQ 443
E +L +N L+ L + N Y+V EY G + FS+ + G++ + R
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEM----FSHLRRIGRFXEPHARFY 146
Query: 444 IALDVATGLNYLHSFTNPPHVHKDINSSNVLLDSDLRAKIANFAMARPAEGQEGEFALTR 503
A V T YLHS +++D+ N+L+D ++ +F A+ +G+ T
Sbjct: 147 AAQIVLT-FEYLHSLD---LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR------TW 196
Query: 504 HIVGTKGYMAPEYLENGLVSTKLDVYAFGVLILEMLTG 541
+ GT Y+APE + + + +D +A GVLI EM G
Sbjct: 197 XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 88/167 (52%), Gaps = 15/167 (8%)
Query: 378 VNGDVSKEIALLNKINHSNLIILSGVCFNEGNCYLVYEYAVNGTLSDWVFSNKNEGKYLD 437
+ + +E+ +L++ N ++ G +++G + E+ G+L D V K G+
Sbjct: 47 IRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSL-DQVL--KKAGRI-- 101
Query: 438 WKQRI--QIALDVATGLNYLHSFTNPPHVHKDINSSNVLLDSDLRAKIANFAMARPAEGQ 495
++I ++++ V GL YL +H+D+ SN+L++S K+ +F ++ GQ
Sbjct: 102 -PEQILGKVSIAVIKGLTYLREKHK--IMHRDVKPSNILVNSRGEIKLCDFGVS----GQ 154
Query: 496 EGEFALTRHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLILEMLTGK 542
+ ++ VGT+ YM+PE L+ S + D+++ G+ ++EM G+
Sbjct: 155 LID-SMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGR 200
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 86/170 (50%), Gaps = 20/170 (11%)
Query: 377 KVNGDVSKEIALLNKINHSNLIILSGVCFNEGNCYLVYEYAVNGTLSDWVFSNKNE--GK 434
K N ++ E ++ +++ ++ L G+C L+ + G L D+V +K+ +
Sbjct: 61 KANKEILDEAYVMASVDNPHVCRLLGICLT-STVQLITQLMPFGCLLDYVREHKDNIGSQ 119
Query: 435 YL-DWKQRIQIALDVATGLNYLHSFTNPPHVHKDINSSNVLLDSDLRAKIANFAMARPAE 493
YL +W + +A G+NYL VH+D+ + NVL+ + KI +F +A+
Sbjct: 120 YLLNW------CVQIAKGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLG 170
Query: 494 GQEGEFALTRHIVGTK---GYMAPEYLENGLVSTKLDVYAFGVLILEMLT 540
+E E+ H G K +MA E + + + + + DV+++GV + E++T
Sbjct: 171 AEEKEY----HAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 216
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 45/158 (28%), Positives = 75/158 (47%), Gaps = 15/158 (9%)
Query: 385 EIALLNKINHSNLIILSGVCFNEGNCYLVYEYAVNGTLSDWVFSN-KNEGKYLDWKQRIQ 443
E +L +N L+ L + N Y+V EY G + FS+ + G++ + R
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEM----FSHLRRIGRFXEPHARFY 146
Query: 444 IALDVATGLNYLHSFTNPPHVHKDINSSNVLLDSDLRAKIANFAMARPAEGQEGEFALTR 503
A V T YLHS +++D+ N+L+D ++ +F A+ +G+ T
Sbjct: 147 AAQIVLT-FEYLHSLD---LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR------TW 196
Query: 504 HIVGTKGYMAPEYLENGLVSTKLDVYAFGVLILEMLTG 541
+ GT Y+APE + + + +D +A GVLI EM G
Sbjct: 197 XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 54/189 (28%), Positives = 87/189 (46%), Gaps = 21/189 (11%)
Query: 365 RGKINGGFAAIKKVNGDV---SKEIA-------LLNKINHSNLIILSGVCFNEGNCYLVY 414
+ K G + A+K + +V E+A +L H L L V
Sbjct: 168 KEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFVM 227
Query: 415 EYAVNGTLSDWVFSNKNEGKYLDWKQRIQIALDVATGLNYLHSFTNPPHVHKDINSSNVL 474
EYA G L F E + + + R A ++ + L+YLHS N V++D+ N++
Sbjct: 228 EYANGGEL---FFHLSRERVFSEDRARFYGA-EIVSALDYLHSEKNV--VYRDLKLENLM 281
Query: 475 LDSDLRAKIANFAMARPAEG-QEGEFALTRHIVGTKGYMAPEYLENGLVSTKLDVYAFGV 533
LD D KI +F + + EG ++G A + GT Y+APE LE+ +D + GV
Sbjct: 282 LDKDGHIKITDFGLCK--EGIKDG--ATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGV 337
Query: 534 LILEMLTGK 542
++ EM+ G+
Sbjct: 338 VMYEMMCGR 346
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 86/170 (50%), Gaps = 20/170 (11%)
Query: 377 KVNGDVSKEIALLNKINHSNLIILSGVCFNEGNCYLVYEYAVNGTLSDWVFSNKNE--GK 434
K N ++ E ++ +++ ++ L G+C L+ + G L D+V +K+ +
Sbjct: 66 KANKEILDEAYVMASVDNPHVCRLLGICLT-STVQLITQLMPFGCLLDYVREHKDNIGSQ 124
Query: 435 YL-DWKQRIQIALDVATGLNYLHSFTNPPHVHKDINSSNVLLDSDLRAKIANFAMARPAE 493
YL +W + +A G+NYL VH+D+ + NVL+ + KI +F +A+
Sbjct: 125 YLLNW------CVQIAKGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLG 175
Query: 494 GQEGEFALTRHIVGTK---GYMAPEYLENGLVSTKLDVYAFGVLILEMLT 540
+E E+ H G K +MA E + + + + + DV+++GV + E++T
Sbjct: 176 AEEKEY----HAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 221
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 88/167 (52%), Gaps = 15/167 (8%)
Query: 378 VNGDVSKEIALLNKINHSNLIILSGVCFNEGNCYLVYEYAVNGTLSDWVFSNKNEGKYLD 437
+ + +E+ +L++ N ++ G +++G + E+ G+L D V K G+
Sbjct: 47 IRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSL-DQVL--KKAGRI-- 101
Query: 438 WKQRI--QIALDVATGLNYLHSFTNPPHVHKDINSSNVLLDSDLRAKIANFAMARPAEGQ 495
++I ++++ V GL YL +H+D+ SN+L++S K+ +F ++ GQ
Sbjct: 102 -PEQILGKVSIAVIKGLTYLREKHK--IMHRDVKPSNILVNSRGEIKLCDFGVS----GQ 154
Query: 496 EGEFALTRHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLILEMLTGK 542
+ ++ VGT+ YM+PE L+ S + D+++ G+ ++EM G+
Sbjct: 155 LID-SMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGR 200
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 86/170 (50%), Gaps = 20/170 (11%)
Query: 377 KVNGDVSKEIALLNKINHSNLIILSGVCFNEGNCYLVYEYAVNGTLSDWVFSNKNE--GK 434
K N ++ E ++ +++ ++ L G+C L+ + G L D+V +K+ +
Sbjct: 62 KANKEILDEAYVMASVDNPHVCRLLGICLT-STVQLITQLMPFGCLLDYVREHKDNIGSQ 120
Query: 435 YL-DWKQRIQIALDVATGLNYLHSFTNPPHVHKDINSSNVLLDSDLRAKIANFAMARPAE 493
YL +W + +A G+NYL VH+D+ + NVL+ + KI +F +A+
Sbjct: 121 YLLNW------CVQIAKGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLG 171
Query: 494 GQEGEFALTRHIVGTK---GYMAPEYLENGLVSTKLDVYAFGVLILEMLT 540
+E E+ H G K +MA E + + + + + DV+++GV + E++T
Sbjct: 172 AEEKEY----HAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 217
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 86/170 (50%), Gaps = 20/170 (11%)
Query: 377 KVNGDVSKEIALLNKINHSNLIILSGVCFNEGNCYLVYEYAVNGTLSDWVFSNKNE--GK 434
K N ++ E ++ +++ ++ L G+C L+ + G L D+V +K+ +
Sbjct: 84 KANKEILDEAYVMASVDNPHVCRLLGICLT-STVQLITQLMPFGCLLDYVREHKDNIGSQ 142
Query: 435 YL-DWKQRIQIALDVATGLNYLHSFTNPPHVHKDINSSNVLLDSDLRAKIANFAMARPAE 493
YL +W + +A G+NYL VH+D+ + NVL+ + KI +F +A+
Sbjct: 143 YLLNW------CVQIAKGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLG 193
Query: 494 GQEGEFALTRHIVGTK---GYMAPEYLENGLVSTKLDVYAFGVLILEMLT 540
+E E+ H G K +MA E + + + + + DV+++GV + E++T
Sbjct: 194 AEEKEY----HAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 239
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 86/170 (50%), Gaps = 20/170 (11%)
Query: 377 KVNGDVSKEIALLNKINHSNLIILSGVCFNEGNCYLVYEYAVNGTLSDWVFSNKNE--GK 434
K N ++ E ++ +++ ++ L G+C L+ + G L D+V +K+ +
Sbjct: 59 KANKEILDEAYVMASVDNPHVCRLLGICLT-STVQLITQLMPFGCLLDYVREHKDNIGSQ 117
Query: 435 YL-DWKQRIQIALDVATGLNYLHSFTNPPHVHKDINSSNVLLDSDLRAKIANFAMARPAE 493
YL +W + +A G+NYL VH+D+ + NVL+ + KI +F +A+
Sbjct: 118 YLLNW------CVQIAKGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLG 168
Query: 494 GQEGEFALTRHIVGTK---GYMAPEYLENGLVSTKLDVYAFGVLILEMLT 540
+E E+ H G K +MA E + + + + + DV+++GV + E++T
Sbjct: 169 AEEKEY----HAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 214
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 45/158 (28%), Positives = 75/158 (47%), Gaps = 15/158 (9%)
Query: 385 EIALLNKINHSNLIILSGVCFNEGNCYLVYEYAVNGTLSDWVFSN-KNEGKYLDWKQRIQ 443
E +L +N L+ L + N Y+V EY G + FS+ + G++ + R
Sbjct: 86 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEM----FSHLRRIGRFXEPHARFY 141
Query: 444 IALDVATGLNYLHSFTNPPHVHKDINSSNVLLDSDLRAKIANFAMARPAEGQEGEFALTR 503
A V T YLHS +++D+ N+L+D ++ +F A+ +G+ T
Sbjct: 142 AAQIVLT-FEYLHSLD---LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR------TW 191
Query: 504 HIVGTKGYMAPEYLENGLVSTKLDVYAFGVLILEMLTG 541
+ GT Y+APE + + + +D +A GVLI EM G
Sbjct: 192 XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 229
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 86/170 (50%), Gaps = 20/170 (11%)
Query: 377 KVNGDVSKEIALLNKINHSNLIILSGVCFNEGNCYLVYEYAVNGTLSDWVFSNKNE--GK 434
K N ++ E ++ +++ ++ L G+C L+ + G L D+V +K+ +
Sbjct: 62 KANKEILDEAYVMASVDNPHVCRLLGICLT-STVQLITQLMPFGCLLDYVREHKDNIGSQ 120
Query: 435 YL-DWKQRIQIALDVATGLNYLHSFTNPPHVHKDINSSNVLLDSDLRAKIANFAMARPAE 493
YL +W + +A G+NYL VH+D+ + NVL+ + KI +F +A+
Sbjct: 121 YLLNW------CVQIAKGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLG 171
Query: 494 GQEGEFALTRHIVGTK---GYMAPEYLENGLVSTKLDVYAFGVLILEMLT 540
+E E+ H G K +MA E + + + + + DV+++GV + E++T
Sbjct: 172 AEEKEY----HAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 217
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 63/260 (24%), Positives = 110/260 (42%), Gaps = 46/260 (17%)
Query: 385 EIALLNKINHS-NLIILSGVCFNEGNCYLV-YEYAVNGTLSDWVFSNKNE---------- 432
E+ +L I H N++ L G C G +V E+ G LS ++ S +NE
Sbjct: 80 ELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPED 139
Query: 433 --GKYLDWKQRIQIALDVATGLNYLHSFTNPPHVHKDINSSNVLLDSDLRAKIANFAMAR 490
+L + I + VA G+ +L S +H+D+ + N+LL KI +F +AR
Sbjct: 140 LYKDFLTLEHLICYSFQVAKGMEFLASRKC---IHRDLAARNILLSEKNVVKICDFGLAR 196
Query: 491 -----PAEGQEGEFALTRHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLILEMLTGKEAA 545
P ++G+ L +MAPE + + + + + DV++FGVL+ E+ + +
Sbjct: 197 DIYKDPDXVRKGDARLPLK------WMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASP 250
Query: 546 ALHAEENNMHLSDVLNAVLTKEDGEESLRHFIDPTLQGNYPLELALLVIRLIDACLKKDP 605
+ + EE R + T + ++D C +P
Sbjct: 251 YPGVKID-----------------EEFCRRLKEGTRMRAPDYTTPEMYQTMLD-CWHGEP 292
Query: 606 TDRPTMYEIEHSLSNILNAS 625
+ RPT E+ L N+L A+
Sbjct: 293 SQRPTFSELVEHLGNLLQAN 312
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 86/170 (50%), Gaps = 20/170 (11%)
Query: 377 KVNGDVSKEIALLNKINHSNLIILSGVCFNEGNCYLVYEYAVNGTLSDWVFSNKNE--GK 434
K N ++ E ++ +++ ++ L G+C L+ + G L D+V +K+ +
Sbjct: 62 KANKEILDEAYVMASVDNPHVCRLLGICLT-STVQLITQLMPFGCLLDYVREHKDNIGSQ 120
Query: 435 YL-DWKQRIQIALDVATGLNYLHSFTNPPHVHKDINSSNVLLDSDLRAKIANFAMARPAE 493
YL +W + +A G+NYL VH+D+ + NVL+ + KI +F +A+
Sbjct: 121 YLLNW------CVQIAKGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLG 171
Query: 494 GQEGEFALTRHIVGTK---GYMAPEYLENGLVSTKLDVYAFGVLILEMLT 540
+E E+ H G K +MA E + + + + + DV+++GV + E++T
Sbjct: 172 AEEKEY----HAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 217
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 86/170 (50%), Gaps = 20/170 (11%)
Query: 377 KVNGDVSKEIALLNKINHSNLIILSGVCFNEGNCYLVYEYAVNGTLSDWVFSNKNE--GK 434
K N ++ E ++ +++ ++ L G+C L+ + G L D+V +K+ +
Sbjct: 65 KANKEILDEAYVMASVDNPHVCRLLGICLT-STVQLITQLMPFGCLLDYVREHKDNIGSQ 123
Query: 435 YL-DWKQRIQIALDVATGLNYLHSFTNPPHVHKDINSSNVLLDSDLRAKIANFAMARPAE 493
YL +W + +A G+NYL VH+D+ + NVL+ + KI +F +A+
Sbjct: 124 YLLNW------CVQIAKGMNYLEDRRL---VHRDLAARNVLVKTPQHVKITDFGLAKLLG 174
Query: 494 GQEGEFALTRHIVGTK---GYMAPEYLENGLVSTKLDVYAFGVLILEMLT 540
+E E+ H G K +MA E + + + + + DV+++GV + E++T
Sbjct: 175 AEEKEY----HAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 220
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 45/158 (28%), Positives = 75/158 (47%), Gaps = 15/158 (9%)
Query: 385 EIALLNKINHSNLIILSGVCFNEGNCYLVYEYAVNGTLSDWVFSN-KNEGKYLDWKQRIQ 443
E +L +N L+ L + N Y+V EY G + FS+ + G++ + R
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEM----FSHLRRIGRFAEPHARFY 146
Query: 444 IALDVATGLNYLHSFTNPPHVHKDINSSNVLLDSDLRAKIANFAMARPAEGQEGEFALTR 503
A V T YLHS +++D+ N+L+D ++ +F A+ +G+ T
Sbjct: 147 AAQIVLT-FEYLHSLD---LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR------TW 196
Query: 504 HIVGTKGYMAPEYLENGLVSTKLDVYAFGVLILEMLTG 541
+ GT Y+APE + + + +D +A GVLI EM G
Sbjct: 197 XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 63/260 (24%), Positives = 110/260 (42%), Gaps = 46/260 (17%)
Query: 385 EIALLNKINHS-NLIILSGVCFNEGNCYLV-YEYAVNGTLSDWVFSNKNE---------- 432
E+ +L I H N++ L G C G +V E+ G LS ++ S +NE
Sbjct: 71 ELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPED 130
Query: 433 --GKYLDWKQRIQIALDVATGLNYLHSFTNPPHVHKDINSSNVLLDSDLRAKIANFAMAR 490
+L + I + VA G+ +L S +H+D+ + N+LL KI +F +AR
Sbjct: 131 LYKDFLTLEHLICYSFQVAKGMEFLASRKC---IHRDLAARNILLSEKNVVKICDFGLAR 187
Query: 491 -----PAEGQEGEFALTRHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLILEMLTGKEAA 545
P ++G+ L +MAPE + + + + + DV++FGVL+ E+ + +
Sbjct: 188 DIXKDPDXVRKGDARLPLK------WMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASP 241
Query: 546 ALHAEENNMHLSDVLNAVLTKEDGEESLRHFIDPTLQGNYPLELALLVIRLIDACLKKDP 605
+ + EE R + T + ++D C +P
Sbjct: 242 YPGVKID-----------------EEFCRRLKEGTRMRAPDYTTPEMYQTMLD-CWHGEP 283
Query: 606 TDRPTMYEIEHSLSNILNAS 625
+ RPT E+ L N+L A+
Sbjct: 284 SQRPTFSELVEHLGNLLQAN 303
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 63/260 (24%), Positives = 110/260 (42%), Gaps = 46/260 (17%)
Query: 385 EIALLNKINHS-NLIILSGVCFNEGNCYLV-YEYAVNGTLSDWVFSNKNE---------- 432
E+ +L I H N++ L G C G +V E+ G LS ++ S +NE
Sbjct: 80 ELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPED 139
Query: 433 --GKYLDWKQRIQIALDVATGLNYLHSFTNPPHVHKDINSSNVLLDSDLRAKIANFAMAR 490
+L + I + VA G+ +L S +H+D+ + N+LL KI +F +AR
Sbjct: 140 LYKDFLTLEHLICYSFQVAKGMEFLASRKC---IHRDLAARNILLSEKNVVKICDFGLAR 196
Query: 491 -----PAEGQEGEFALTRHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLILEMLTGKEAA 545
P ++G+ L +MAPE + + + + + DV++FGVL+ E+ + +
Sbjct: 197 DIXKDPDXVRKGDARLPLK------WMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASP 250
Query: 546 ALHAEENNMHLSDVLNAVLTKEDGEESLRHFIDPTLQGNYPLELALLVIRLIDACLKKDP 605
+ + EE R + T + ++D C +P
Sbjct: 251 YPGVKID-----------------EEFCRRLKEGTRMRAPDYTTPEMYQTMLD-CWHGEP 292
Query: 606 TDRPTMYEIEHSLSNILNAS 625
+ RPT E+ L N+L A+
Sbjct: 293 SQRPTFSELVEHLGNLLQAN 312
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 88/167 (52%), Gaps = 15/167 (8%)
Query: 378 VNGDVSKEIALLNKINHSNLIILSGVCFNEGNCYLVYEYAVNGTLSDWVFSNKNEGKYLD 437
+ + +E+ +L++ N ++ G +++G + E+ G+L D V K G+
Sbjct: 74 IRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSL-DQVL--KKAGRI-- 128
Query: 438 WKQRI--QIALDVATGLNYLHSFTNPPHVHKDINSSNVLLDSDLRAKIANFAMARPAEGQ 495
++I ++++ V GL YL +H+D+ SN+L++S K+ +F ++ GQ
Sbjct: 129 -PEQILGKVSIAVIKGLTYLREKHK--IMHRDVKPSNILVNSRGEIKLCDFGVS----GQ 181
Query: 496 EGEFALTRHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLILEMLTGK 542
+ ++ VGT+ YM+PE L+ S + D+++ G+ ++EM G+
Sbjct: 182 LID-SMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGR 227
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 47/187 (25%), Positives = 84/187 (44%), Gaps = 15/187 (8%)
Query: 359 IQGSVYRGKINGGFAAIKKVNGDVSKEIALLNKINHSNLIILSGVCFNEGNCYLVYEYAV 418
+ G Y KI + + + +E + + H N++ L EG+ YL+++
Sbjct: 45 LAGQEYAAKIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDSISEEGHHYLIFDLVT 104
Query: 419 NGTLSDWVFSNKNEGKYLDWKQRIQIALDVATGLNYLHSFTNPPHVHKDINSSNVLLDSD 478
G L + + + + + D IQ L+ + + VH+D+ N+LL S
Sbjct: 105 GGELFEDIVAREYYSE-ADASHCIQQILEAVLHCHQMGV------VHRDLKPENLLLASK 157
Query: 479 LRA---KIANFAMARPAEG-QEGEFALTRHIVGTKGYMAPEYLENGLVSTKLDVYAFGVL 534
L+ K+A+F +A EG Q+ F GT GY++PE L +D++A GV+
Sbjct: 158 LKGAAVKLADFGLAIEVEGEQQAWFGFA----GTPGYLSPEVLRKDPYGKPVDLWACGVI 213
Query: 535 ILEMLTG 541
+ +L G
Sbjct: 214 LYILLVG 220
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 43/169 (25%), Positives = 86/169 (50%), Gaps = 18/169 (10%)
Query: 377 KVNGDVSKEIALLNKINHSNLIILSGVCFNEGNCYLVYEYAVNGTLSDWVFSNKNE--GK 434
K N ++ E ++ +++ ++ L G+C L+ + G L D+V +K+ +
Sbjct: 53 KANKEILDEAYVMASVDNPHVCRLLGICLT-STVQLITQLMPFGCLLDYVREHKDNIGSQ 111
Query: 435 YLDWKQRIQIALDVATGLNYLHSFTNPPHVHKDINSSNVLLDSDLRAKIANFAMARPAEG 494
YL + + +A G+NYL + VH+D+ + NVL+ + KI +F +A+
Sbjct: 112 YL-----LNWCVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGA 163
Query: 495 QEGEFALTRHIVGTK---GYMAPEYLENGLVSTKLDVYAFGVLILEMLT 540
+E E+ H G K +MA E + + + + + DV+++GV + E++T
Sbjct: 164 EEKEY----HAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 208
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 63/260 (24%), Positives = 110/260 (42%), Gaps = 46/260 (17%)
Query: 385 EIALLNKINHS-NLIILSGVCFNEGNCYLVY-EYAVNGTLSDWVFSNKNE---------- 432
E+ +L I H N++ L G C G +V E+ G LS ++ S +NE
Sbjct: 71 ELKILIHIGHHLNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPED 130
Query: 433 --GKYLDWKQRIQIALDVATGLNYLHSFTNPPHVHKDINSSNVLLDSDLRAKIANFAMAR 490
+L + I + VA G+ +L S +H+D+ + N+LL KI +F +AR
Sbjct: 131 LYKDFLTLEHLICYSFQVAKGMEFLASRKC---IHRDLAARNILLSEKNVVKICDFGLAR 187
Query: 491 -----PAEGQEGEFALTRHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLILEMLTGKEAA 545
P ++G+ L +MAPE + + + + + DV++FGVL+ E+ + +
Sbjct: 188 DIXKDPDXVRKGDARLPLK------WMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASP 241
Query: 546 ALHAEENNMHLSDVLNAVLTKEDGEESLRHFIDPTLQGNYPLELALLVIRLIDACLKKDP 605
+ + EE R + T + ++D C +P
Sbjct: 242 YPGVKID-----------------EEFCRRLKEGTRMRAPDYTTPEMYQTMLD-CWHGEP 283
Query: 606 TDRPTMYEIEHSLSNILNAS 625
+ RPT E+ L N+L A+
Sbjct: 284 SQRPTFSELVEHLGNLLQAN 303
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 86/170 (50%), Gaps = 20/170 (11%)
Query: 377 KVNGDVSKEIALLNKINHSNLIILSGVCFNEGNCYLVYEYAVNGTLSDWVFSNKNE--GK 434
K N ++ E ++ +++ ++ L G+C L+ + G L D+V +K+ +
Sbjct: 56 KANKEILDEAYVMASVDNPHVCRLLGICLT-STVQLITQLMPFGCLLDYVREHKDNIGSQ 114
Query: 435 YL-DWKQRIQIALDVATGLNYLHSFTNPPHVHKDINSSNVLLDSDLRAKIANFAMARPAE 493
YL +W + +A G+NYL VH+D+ + NVL+ + KI +F +A+
Sbjct: 115 YLLNW------CVQIAEGMNYLEDRRL---VHRDLAARNVLVKTPQHVKITDFGLAKLLG 165
Query: 494 GQEGEFALTRHIVGTK---GYMAPEYLENGLVSTKLDVYAFGVLILEMLT 540
+E E+ H G K +MA E + + + + + DV+++GV + E++T
Sbjct: 166 AEEKEY----HAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 211
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 83/176 (47%), Gaps = 13/176 (7%)
Query: 368 INGGFAAIKKVNGDVSKEIALLNKINHSNLIILSGVCFNEGNCYLVYEYAVNGTLSDWVF 427
IN A + G + +EI+ L + H ++I L V ++ +V EYA N L D++
Sbjct: 37 INKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMVIEYAGN-ELFDYIV 95
Query: 428 SNKNEGKYLDWKQRIQIALDVATGLNYLHSFTNPPHVHKDINSSNVLLDSDLRAKIANFA 487
+ ++ + + + + Y H VH+D+ N+LLD L KIA+F
Sbjct: 96 QRDK----MSEQEARRFFQQIISAVEYCHRHKI---VHRDLKPENLLLDEHLNVKIADFG 148
Query: 488 MARPAEGQEGEFALTRHIVGTKGYMAPEYLENGLVS-TKLDVYAFGVLILEMLTGK 542
++ +G F T G+ Y APE + L + ++DV++ GV++ ML +
Sbjct: 149 LSNIM--TDGNFLKTS--CGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRR 200
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 67/242 (27%), Positives = 117/242 (48%), Gaps = 33/242 (13%)
Query: 381 DVSKEIALLNKINHSNLIILSGVCFNEGNCYLVYEYAVNGTLSDWVFSNKNEGKYLDWKQ 440
++ +E+ +L +I H N+I L + N+ + L+ E G L D++ E + L +
Sbjct: 54 EIEREVNILREIRHPNIITLHDIFENKTDVVLILELVSGGELFDFL----AEKESLTEDE 109
Query: 441 RIQIALDVATGLNYLHSFTNPPHVHKDINSSNV-LLDSDL---RAKIANFAMARPAEGQE 496
Q + G++YLHS H D+ N+ LLD ++ R K+ +F +A E
Sbjct: 110 ATQFLKQILDGVHYLHS---KRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAG- 165
Query: 497 GEFALTRHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLILEMLTGKEAAALHAEENNMHL 556
EF ++I GT ++APE + + + D+++ GV+ +L+G A+ E L
Sbjct: 166 NEF---KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG--ASPFLGETKQETL 220
Query: 557 SDVLNAVLTKEDGEESLRHFIDPTLQGNYPLELALLVIRLIDACLKKDPTDRPTMYE-IE 615
+++ +AV D E +F + + ELA IR + L KDP R T+ + +E
Sbjct: 221 TNI-SAVNYDFDEE----YFSNTS-------ELAKDFIRRL---LVKDPKRRMTIAQSLE 265
Query: 616 HS 617
HS
Sbjct: 266 HS 267
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 88/167 (52%), Gaps = 15/167 (8%)
Query: 378 VNGDVSKEIALLNKINHSNLIILSGVCFNEGNCYLVYEYAVNGTLSDWVFSNKNEGKYLD 437
+ + +E+ +L++ N ++ G +++G + E+ G+L D V K G+
Sbjct: 47 IRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSL-DQVL--KKAGRI-- 101
Query: 438 WKQRI--QIALDVATGLNYLHSFTNPPHVHKDINSSNVLLDSDLRAKIANFAMARPAEGQ 495
++I ++++ V GL YL +H+D+ SN+L++S K+ +F ++ GQ
Sbjct: 102 -PEQILGKVSIAVIKGLTYLREKHK--IMHRDVKPSNILVNSRGEIKLCDFGVS----GQ 154
Query: 496 EGEFALTRHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLILEMLTGK 542
+ ++ VGT+ YM+PE L+ S + D+++ G+ ++EM G+
Sbjct: 155 LID-SMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGR 200
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 88/167 (52%), Gaps = 15/167 (8%)
Query: 378 VNGDVSKEIALLNKINHSNLIILSGVCFNEGNCYLVYEYAVNGTLSDWVFSNKNEGKYLD 437
+ + +E+ +L++ N ++ G +++G + E+ G+L D V K G+
Sbjct: 47 IRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSL-DQVL--KKAGRI-- 101
Query: 438 WKQRI--QIALDVATGLNYLHSFTNPPHVHKDINSSNVLLDSDLRAKIANFAMARPAEGQ 495
++I ++++ V GL YL +H+D+ SN+L++S K+ +F ++ GQ
Sbjct: 102 -PEQILGKVSIAVIKGLTYLREKHK--IMHRDVKPSNILVNSRGEIKLCDFGVS----GQ 154
Query: 496 EGEFALTRHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLILEMLTGK 542
+ ++ VGT+ YM+PE L+ S + D+++ G+ ++EM G+
Sbjct: 155 LID-SMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGR 200
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 63/257 (24%), Positives = 111/257 (43%), Gaps = 40/257 (15%)
Query: 363 VYRGKINGGFAAIKKVNGD-VSKEIALLNKINHSNLIILSGVCFNEGNCYLVYEYAVNGT 421
V+ GK+ +K + +S EIA+ +++ +++ G ++ Y+V E +
Sbjct: 69 VFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGFHGFFEDDDFVYVVLEICRRRS 128
Query: 422 LSDWVFSNK----NEGKYLDWKQRIQIALDVATGLNYLHSFTNPPHVHKDINSSNVLLDS 477
L + K E +Y +Q IQ G+ YLH N +H+D+ N+ L+
Sbjct: 129 LLELHKRRKAVTEPEARYF-MRQTIQ-------GVQYLH---NNRVIHRDLKLGNLFLND 177
Query: 478 DLRAKIANFAMARPAEGQEGEFALTRHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLILE 537
D+ KI +F +A E +GE + + GT Y+APE L S ++D+++ G ++
Sbjct: 178 DMDVKIGDFGLATKIEF-DGE--RKKXLCGTPNYIAPEVLCKKGHSFEVDIWSLGCILYT 234
Query: 538 MLTGKEAAALHAEENNMHLSDVLNAVLTKEDGEESLRHFIDPTLQGNYPLELALLVIRLI 597
+L GK S + + + E S+ I+P LI
Sbjct: 235 LLVGKPP---------FETSCLKETYIRIKKNEYSVPRHINPVASA------------LI 273
Query: 598 DACLKKDPTDRPTMYEI 614
L DPT RP++ E+
Sbjct: 274 RRMLHADPTLRPSVAEL 290
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 45/158 (28%), Positives = 75/158 (47%), Gaps = 15/158 (9%)
Query: 385 EIALLNKINHSNLIILSGVCFNEGNCYLVYEYAVNGTLSDWVFSN-KNEGKYLDWKQRIQ 443
E +L +N L+ L + N Y+V EY G + FS+ + G++ + R
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEM----FSHLRRIGRFSEPHARFY 146
Query: 444 IALDVATGLNYLHSFTNPPHVHKDINSSNVLLDSDLRAKIANFAMARPAEGQEGEFALTR 503
A V T YLHS +++D+ N+L+D ++ +F A+ +G+ T
Sbjct: 147 AAQIVLT-FEYLHSLD---LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR------TW 196
Query: 504 HIVGTKGYMAPEYLENGLVSTKLDVYAFGVLILEMLTG 541
+ GT Y+APE + + + +D +A GVLI EM G
Sbjct: 197 XLAGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 63/260 (24%), Positives = 110/260 (42%), Gaps = 46/260 (17%)
Query: 385 EIALLNKINHS-NLIILSGVCFNEGNCYLV-YEYAVNGTLSDWVFSNKNE---------- 432
E+ +L I H N++ L G C G +V E+ G LS ++ S +NE
Sbjct: 117 ELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPED 176
Query: 433 --GKYLDWKQRIQIALDVATGLNYLHSFTNPPHVHKDINSSNVLLDSDLRAKIANFAMAR 490
+L + I + VA G+ +L S +H+D+ + N+LL KI +F +AR
Sbjct: 177 LYKDFLTLEHLICYSFQVAKGMEFLASRKC---IHRDLAARNILLSEKNVVKICDFGLAR 233
Query: 491 -----PAEGQEGEFALTRHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLILEMLTGKEAA 545
P ++G+ L +MAPE + + + + + DV++FGVL+ E+ + +
Sbjct: 234 DIYKDPDYVRKGDARLPLK------WMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASP 287
Query: 546 ALHAEENNMHLSDVLNAVLTKEDGEESLRHFIDPTLQGNYPLELALLVIRLIDACLKKDP 605
+ + EE R + T + ++D C +P
Sbjct: 288 YPGVKID-----------------EEFCRRLKEGTRMRAPDYTTPEMYQTMLD-CWHGEP 329
Query: 606 TDRPTMYEIEHSLSNILNAS 625
+ RPT E+ L N+L A+
Sbjct: 330 SQRPTFSELVEHLGNLLQAN 349
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 83/165 (50%), Gaps = 15/165 (9%)
Query: 381 DVSKEIALLNKINHSNLIILSGVCFNEGNCYLVYEYAVNGTLSDWVFSNKNEGKYLDWKQ 440
++ +E+ +L +I H N+I L + N+ + L+ E G L D++ E + L +
Sbjct: 61 EIEREVNILREIRHPNIITLHDIFENKTDVVLILELVSGGELFDFL----AEKESLTEDE 116
Query: 441 RIQIALDVATGLNYLHSFTNPPHVHKDINSSNV-LLDSDL---RAKIANFAMARPAEGQE 496
Q + G++YLHS H D+ N+ LLD ++ R K+ +F +A E
Sbjct: 117 ATQFLKQILDGVHYLHS---KRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAG- 172
Query: 497 GEFALTRHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLILEMLTG 541
EF ++I GT ++APE + + + D+++ GV+ +L+G
Sbjct: 173 NEF---KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 214
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 58.9 bits (141), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 66/245 (26%), Positives = 108/245 (44%), Gaps = 38/245 (15%)
Query: 384 KEIALLNKINHSNLIILSGVCFNEGNCYLVYEYAVNGTLSDWVFSNKNEGKYLDWKQRIQ 443
+E + + +H +++ L GV E +++ E G L ++ K LD I
Sbjct: 440 QEALTMRQFDHPHIVKLIGV-ITENPVWIIMELCTLGELRSFLQVRKFS---LDLASLIL 495
Query: 444 IALDVATGLNYLHSFTNPPHVHKDINSSNVLLDSDLRAKIANFAMARPAEGQEGEFALTR 503
A ++T L YL S VH+DI + NVL+ + K+ +F ++R E +
Sbjct: 496 YAYQLSTALAYLES---KRFVHRDIAARNVLVSATDCVKLGDFGLSRYMED-------ST 545
Query: 504 HIVGTKG-----YMAPEYLENGLVSTKLDVYAFGVLILEMLTGKEAAALHAEENNMHLSD 558
+ +KG +MAPE + ++ DV+ FGV + E+L +NN D
Sbjct: 546 YYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHG-VKPFQGVKNN----D 600
Query: 559 VLNAVLTKEDGEESLRHFIDPTLQGNYPLELALLVIRLIDACLKKDPTDRPTMYEIEHSL 618
V+ + E+GE R + P N P L L+ + C DP+ RP E++ L
Sbjct: 601 VIGRI---ENGE---RLPMPP----NCPPTLYSLMTK----CWAYDPSRRPRFTELKAQL 646
Query: 619 SNILN 623
S IL
Sbjct: 647 STILE 651
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 58.9 bits (141), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 63/257 (24%), Positives = 111/257 (43%), Gaps = 40/257 (15%)
Query: 363 VYRGKINGGFAAIKKVNGD-VSKEIALLNKINHSNLIILSGVCFNEGNCYLVYEYAVNGT 421
V+ GK+ +K + +S EIA+ +++ +++ G ++ Y+V E +
Sbjct: 69 VFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGFHGFFEDDDFVYVVLEICRRRS 128
Query: 422 LSDWVFSNK----NEGKYLDWKQRIQIALDVATGLNYLHSFTNPPHVHKDINSSNVLLDS 477
L + K E +Y +Q IQ G+ YLH N +H+D+ N+ L+
Sbjct: 129 LLELHKRRKAVTEPEARYF-MRQTIQ-------GVQYLH---NNRVIHRDLKLGNLFLND 177
Query: 478 DLRAKIANFAMARPAEGQEGEFALTRHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLILE 537
D+ KI +F +A E +GE + + GT Y+APE L S ++D+++ G ++
Sbjct: 178 DMDVKIGDFGLATKIEF-DGE--RKKDLCGTPNYIAPEVLCKKGHSFEVDIWSLGCILYT 234
Query: 538 MLTGKEAAALHAEENNMHLSDVLNAVLTKEDGEESLRHFIDPTLQGNYPLELALLVIRLI 597
+L GK S + + + E S+ I+P LI
Sbjct: 235 LLVGKPP---------FETSCLKETYIRIKKNEYSVPRHINPVASA------------LI 273
Query: 598 DACLKKDPTDRPTMYEI 614
L DPT RP++ E+
Sbjct: 274 RRMLHADPTLRPSVAEL 290
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 58.9 bits (141), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 63/258 (24%), Positives = 111/258 (43%), Gaps = 40/258 (15%)
Query: 362 SVYRGKINGGFAAIKKVNGD-VSKEIALLNKINHSNLIILSGVCFNEGNCYLVYEYAVNG 420
V+ GK+ +K + +S EIA+ +++ +++ G ++ Y+V E
Sbjct: 52 EVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGFHGFFEDDDFVYVVLEICRRR 111
Query: 421 TLSDWVFSNK----NEGKYLDWKQRIQIALDVATGLNYLHSFTNPPHVHKDINSSNVLLD 476
+L + K E +Y +Q IQ G+ YLH N +H+D+ N+ L+
Sbjct: 112 SLLELHKRRKAVTEPEARYF-MRQTIQ-------GVQYLH---NNRVIHRDLKLGNLFLN 160
Query: 477 SDLRAKIANFAMARPAEGQEGEFALTRHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLIL 536
D+ KI +F +A E +GE + + GT Y+APE L S ++D+++ G ++
Sbjct: 161 DDMDVKIGDFGLATKIEF-DGE--RKKDLCGTPNYIAPEVLCKKGHSFEVDIWSLGCILY 217
Query: 537 EMLTGKEAAALHAEENNMHLSDVLNAVLTKEDGEESLRHFIDPTLQGNYPLELALLVIRL 596
+L GK S + + + E S+ I+P L
Sbjct: 218 TLLVGKPP---------FETSCLKETYIRIKKNEYSVPRHINPVASA------------L 256
Query: 597 IDACLKKDPTDRPTMYEI 614
I L DPT RP++ E+
Sbjct: 257 IRRMLHADPTLRPSVAEL 274
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 58.9 bits (141), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 63/260 (24%), Positives = 110/260 (42%), Gaps = 46/260 (17%)
Query: 385 EIALLNKINHS-NLIILSGVCFNEGNCYLVY-EYAVNGTLSDWVFSNKNE---------- 432
E+ +L I H N++ L G C G +V E+ G LS ++ S +NE
Sbjct: 71 ELKILIHIGHHLNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPED 130
Query: 433 --GKYLDWKQRIQIALDVATGLNYLHSFTNPPHVHKDINSSNVLLDSDLRAKIANFAMAR 490
+L + I + VA G+ +L S +H+D+ + N+LL KI +F +AR
Sbjct: 131 LYKDFLTLEHLICYSFQVAKGMEFLASRKC---IHRDLAARNILLSEKNVVKICDFGLAR 187
Query: 491 -----PAEGQEGEFALTRHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLILEMLTGKEAA 545
P ++G+ L +MAPE + + + + + DV++FGVL+ E+ + +
Sbjct: 188 DIYKDPDYVRKGDARLPLK------WMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASP 241
Query: 546 ALHAEENNMHLSDVLNAVLTKEDGEESLRHFIDPTLQGNYPLELALLVIRLIDACLKKDP 605
+ + EE R + T + ++D C +P
Sbjct: 242 YPGVKID-----------------EEFCRRLKEGTRMRAPDYTTPEMYQTMLD-CWHGEP 283
Query: 606 TDRPTMYEIEHSLSNILNAS 625
+ RPT E+ L N+L A+
Sbjct: 284 SQRPTFSELVEHLGNLLQAN 303
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 58.9 bits (141), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 49/166 (29%), Positives = 82/166 (49%), Gaps = 15/166 (9%)
Query: 379 NGDVSKEIALLNKINHSNLIILSGVCFNEGNCYLVYEYAVNGTLSDWVFSNKNEGKYLDW 438
N + +E+A+L ++H N++ L ++ N YLV E G L D + + K+ +
Sbjct: 80 NSKLLEEVAVLKLLDHPNIMKLYDFFEDKRNYYLVMECYKGGELFDEII---HRMKFNEV 136
Query: 439 KQRIQIALDVATGLNYLHSFTNPPHVHKDINSSNVLLDS---DLRAKIANFAMARPAEGQ 495
+ I V +G+ YLH VH+D+ N+LL+S D KI +F ++ E Q
Sbjct: 137 DAAV-IIKQVLSGVTYLHKHNI---VHRDLKPENLLLESKEKDALIKIVDFGLSAVFENQ 192
Query: 496 EGEFALTRHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLILEMLTG 541
+ + +GT Y+APE L K DV++ GV++ +L G
Sbjct: 193 KK----MKERLGTAYYIAPEVLRKK-YDEKCDVWSIGVILFILLAG 233
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 58.9 bits (141), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 58/201 (28%), Positives = 95/201 (47%), Gaps = 29/201 (14%)
Query: 361 GSVYRGK--INGGFAAIKKV---NGD------VSKEIALLNKIN---HSNLIILSGVCF- 405
G+VY+ + +G F A+K V NG+ +E+ALL ++ H N++ L VC
Sbjct: 18 GTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLEAFEHPNVVRLMDVCAT 77
Query: 406 ----NEGNCYLVYEYAVNGTLSDWVFSNKNEGKYLDWKQRIQIALDVATGLNYLHSFTNP 461
E LV+E+ V+ L ++ +K L + + GL++LH+
Sbjct: 78 SRTDREIKVTLVFEH-VDQDLRTYL--DKAPPPGLPAETIKDLMRQFLRGLDFLHANCI- 133
Query: 462 PHVHKDINSSNVLLDSDLRAKIANFAMARPAEGQEGEFALTRHIVGTKGYMAPEYLENGL 521
VH+D+ N+L+ S K+A+F +AR Q AL +V T Y APE L
Sbjct: 134 --VHRDLKPENILVTSGGTVKLADFGLARIYSYQ---MALA-PVVVTLWYRAPEVLLQST 187
Query: 522 VSTKLDVYAFGVLILEMLTGK 542
+T +D+++ G + EM K
Sbjct: 188 YATPVDMWSVGCIFAEMFRRK 208
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 58.9 bits (141), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 83/176 (47%), Gaps = 13/176 (7%)
Query: 368 INGGFAAIKKVNGDVSKEIALLNKINHSNLIILSGVCFNEGNCYLVYEYAVNGTLSDWVF 427
IN A + G + +EI+ L + H ++I L V ++ +V EYA N L D++
Sbjct: 41 INKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMVIEYAGN-ELFDYIV 99
Query: 428 SNKNEGKYLDWKQRIQIALDVATGLNYLHSFTNPPHVHKDINSSNVLLDSDLRAKIANFA 487
+ ++ + + + + Y H VH+D+ N+LLD L KIA+F
Sbjct: 100 QRDK----MSEQEARRFFQQIISAVEYCHRHKI---VHRDLKPENLLLDEHLNVKIADFG 152
Query: 488 MARPAEGQEGEFALTRHIVGTKGYMAPEYLENGLVS-TKLDVYAFGVLILEMLTGK 542
++ +G F T G+ Y APE + L + ++DV++ GV++ ML +
Sbjct: 153 LSNIM--TDGNFLKTS--CGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRR 204
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/158 (28%), Positives = 75/158 (47%), Gaps = 15/158 (9%)
Query: 385 EIALLNKINHSNLIILSGVCFNEGNCYLVYEYAVNGTLSDWVFSN-KNEGKYLDWKQRIQ 443
E +L +N L+ L + N Y+V EY G + FS+ + G++ + R
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEM----FSHLRRIGRFSEPHARFY 146
Query: 444 IALDVATGLNYLHSFTNPPHVHKDINSSNVLLDSDLRAKIANFAMARPAEGQEGEFALTR 503
A V T YLHS +++D+ N+L+D ++ +F A+ +G+ T
Sbjct: 147 AAQIVLT-FEYLHSLD---LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR------TW 196
Query: 504 HIVGTKGYMAPEYLENGLVSTKLDVYAFGVLILEMLTG 541
+ GT Y+APE + + + +D +A GVLI EM G
Sbjct: 197 XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 83/165 (50%), Gaps = 15/165 (9%)
Query: 381 DVSKEIALLNKINHSNLIILSGVCFNEGNCYLVYEYAVNGTLSDWVFSNKNEGKYLDWKQ 440
++ +E+ +L +I H N+I L + N+ + L+ E G L D++ E + L +
Sbjct: 75 EIEREVNILREIRHPNIITLHDIFENKTDVVLILELVSGGELFDFL----AEKESLTEDE 130
Query: 441 RIQIALDVATGLNYLHSFTNPPHVHKDINSSNV-LLDSDL---RAKIANFAMARPAEGQE 496
Q + G++YLHS H D+ N+ LLD ++ R K+ +F +A E
Sbjct: 131 ATQFLKQILDGVHYLHS---KRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAG- 186
Query: 497 GEFALTRHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLILEMLTG 541
EF ++I GT ++APE + + + D+++ GV+ +L+G
Sbjct: 187 NEF---KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 228
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 85/170 (50%), Gaps = 20/170 (11%)
Query: 377 KVNGDVSKEIALLNKINHSNLIILSGVCFNEGNCYLVYEYAVNGTLSDWVFSNKNE--GK 434
K N ++ E ++ +++ ++ L G+C L+ + G L D+V +K+ +
Sbjct: 61 KANKEILDEAYVMASVDNPHVCRLLGICLT-STVQLIMQLMPFGCLLDYVREHKDNIGSQ 119
Query: 435 YL-DWKQRIQIALDVATGLNYLHSFTNPPHVHKDINSSNVLLDSDLRAKIANFAMARPAE 493
YL +W + +A G+NYL VH+D+ + NVL+ + KI +F A+
Sbjct: 120 YLLNW------CVQIAKGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGRAKLLG 170
Query: 494 GQEGEFALTRHIVGTK---GYMAPEYLENGLVSTKLDVYAFGVLILEMLT 540
+E E+ H G K +MA E + + + + + DV+++GV + E++T
Sbjct: 171 AEEKEY----HAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 216
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 85/170 (50%), Gaps = 20/170 (11%)
Query: 377 KVNGDVSKEIALLNKINHSNLIILSGVCFNEGNCYLVYEYAVNGTLSDWVFSNKNE--GK 434
K N ++ E ++ +++ ++ L G+C L+ + G L D+V +K+ +
Sbjct: 63 KANKEILDEAYVMASVDNPHVCRLLGICLT-STVQLIMQLMPFGCLLDYVREHKDNIGSQ 121
Query: 435 YL-DWKQRIQIALDVATGLNYLHSFTNPPHVHKDINSSNVLLDSDLRAKIANFAMARPAE 493
YL +W + +A G+NYL VH+D+ + NVL+ + KI +F A+
Sbjct: 122 YLLNW------CVQIAKGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGRAKLLG 172
Query: 494 GQEGEFALTRHIVGTK---GYMAPEYLENGLVSTKLDVYAFGVLILEMLT 540
+E E+ H G K +MA E + + + + + DV+++GV + E++T
Sbjct: 173 AEEKEY----HAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 218
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/158 (28%), Positives = 76/158 (48%), Gaps = 15/158 (9%)
Query: 385 EIALLNKINHSNLIILSGVCFNEGNCYLVYEYAVNGTLSDWVFSN-KNEGKYLDWKQRIQ 443
E +L +N L+ L + N Y+V EYA G + FS+ + G++ + R
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEM----FSHLRRIGRFSEPHARFY 146
Query: 444 IALDVATGLNYLHSFTNPPHVHKDINSSNVLLDSDLRAKIANFAMARPAEGQEGEFALTR 503
A V T YLHS +++D+ N+++D ++ +F A+ +G+ T
Sbjct: 147 AAQIVLT-FEYLHSLD---LIYRDLKPENLMIDQQGYIQVTDFGFAKRVKGR------TW 196
Query: 504 HIVGTKGYMAPEYLENGLVSTKLDVYAFGVLILEMLTG 541
+ GT Y+APE + + + +D +A GVLI EM G
Sbjct: 197 XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 83/176 (47%), Gaps = 13/176 (7%)
Query: 368 INGGFAAIKKVNGDVSKEIALLNKINHSNLIILSGVCFNEGNCYLVYEYAVNGTLSDWVF 427
IN A + G + +EI+ L + H ++I L V ++ +V EYA N L D++
Sbjct: 46 INKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMVIEYAGN-ELFDYIV 104
Query: 428 SNKNEGKYLDWKQRIQIALDVATGLNYLHSFTNPPHVHKDINSSNVLLDSDLRAKIANFA 487
+ ++ + + + + Y H VH+D+ N+LLD L KIA+F
Sbjct: 105 QRDK----MSEQEARRFFQQIISAVEYCHRHKI---VHRDLKPENLLLDEHLNVKIADFG 157
Query: 488 MARPAEGQEGEFALTRHIVGTKGYMAPEYLENGLVS-TKLDVYAFGVLILEMLTGK 542
++ +G F T G+ Y APE + L + ++DV++ GV++ ML +
Sbjct: 158 LSNIM--TDGNFLKTS--CGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRR 209
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/158 (28%), Positives = 75/158 (47%), Gaps = 15/158 (9%)
Query: 385 EIALLNKINHSNLIILSGVCFNEGNCYLVYEYAVNGTLSDWVFSN-KNEGKYLDWKQRIQ 443
E +L +N L+ L + N Y+V EY G + FS+ + G++ + R
Sbjct: 78 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEM----FSHLRRIGRFSEPHARFY 133
Query: 444 IALDVATGLNYLHSFTNPPHVHKDINSSNVLLDSDLRAKIANFAMARPAEGQEGEFALTR 503
A V T YLHS +++D+ N+L+D ++ +F A+ +G+ T
Sbjct: 134 AAQIVLT-FEYLHSLD---LIYRDLKPENLLIDEQGYIQVTDFGFAKRVKGR------TW 183
Query: 504 HIVGTKGYMAPEYLENGLVSTKLDVYAFGVLILEMLTG 541
+ GT Y+APE + + + +D +A GVLI EM G
Sbjct: 184 XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 221
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/158 (28%), Positives = 75/158 (47%), Gaps = 15/158 (9%)
Query: 385 EIALLNKINHSNLIILSGVCFNEGNCYLVYEYAVNGTLSDWVFSN-KNEGKYLDWKQRIQ 443
E +L +N L+ L + N Y+V EY G + FS+ + G++ + R
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEM----FSHLRRIGRFSEPHARFY 146
Query: 444 IALDVATGLNYLHSFTNPPHVHKDINSSNVLLDSDLRAKIANFAMARPAEGQEGEFALTR 503
A V T YLHS +++D+ N+L+D ++ +F A+ +G+ T
Sbjct: 147 AAQIVLT-FEYLHSLD---LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR------TW 196
Query: 504 HIVGTKGYMAPEYLENGLVSTKLDVYAFGVLILEMLTG 541
+ GT Y+APE + + + +D +A GVLI EM G
Sbjct: 197 XLXGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/158 (28%), Positives = 75/158 (47%), Gaps = 15/158 (9%)
Query: 385 EIALLNKINHSNLIILSGVCFNEGNCYLVYEYAVNGTLSDWVFSN-KNEGKYLDWKQRIQ 443
E +L +N L+ L + N Y+V EY G + FS+ + G++ + R
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEM----FSHLRRIGRFSEPHARFY 146
Query: 444 IALDVATGLNYLHSFTNPPHVHKDINSSNVLLDSDLRAKIANFAMARPAEGQEGEFALTR 503
A V T YLHS +++D+ N+L+D ++ +F A+ +G+ T
Sbjct: 147 AAQIVLT-FEYLHSLD---LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR------TW 196
Query: 504 HIVGTKGYMAPEYLENGLVSTKLDVYAFGVLILEMLTG 541
+ GT Y+APE + + + +D +A GVLI EM G
Sbjct: 197 XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 75/158 (47%), Gaps = 15/158 (9%)
Query: 385 EIALLNKINHSNLIILSGVCFNEGNCYLVYEYAVNGTLSDWVFSN-KNEGKYLDWKQRIQ 443
E +L +N L L + N Y+V EYA G + FS+ + G++ + R
Sbjct: 92 EKRILQAVNFPFLTKLEFSFKDNSNLYMVMEYAPGGEM----FSHLRRIGRFSEPHARFY 147
Query: 444 IALDVATGLNYLHSFTNPPHVHKDINSSNVLLDSDLRAKIANFAMARPAEGQEGEFALTR 503
A V T YLHS +++D+ N+++D K+ +F A+ +G+ T
Sbjct: 148 AAQIVLT-FEYLHSLD---LIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGR------TW 197
Query: 504 HIVGTKGYMAPEYLENGLVSTKLDVYAFGVLILEMLTG 541
+ GT Y+APE + + + +D +A GVLI EM G
Sbjct: 198 XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 87/167 (52%), Gaps = 15/167 (8%)
Query: 378 VNGDVSKEIALLNKINHSNLIILSGVCFNEGNCYLVYEYAVNGTLSDWVFSNKNEGKYLD 437
+ + +E+ +L++ N ++ G +++G + E+ G+L D V K G+
Sbjct: 50 IRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSL-DQVL--KKAGRI-- 104
Query: 438 WKQRI--QIALDVATGLNYLHSFTNPPHVHKDINSSNVLLDSDLRAKIANFAMARPAEGQ 495
++I ++++ V GL YL +H+D+ SN+L++S K+ +F ++ GQ
Sbjct: 105 -PEQILGKVSIAVIKGLTYLREKHKI--MHRDVKPSNILVNSRGEIKLCDFGVS----GQ 157
Query: 496 EGEFALTRHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLILEMLTGK 542
+ + VGT+ YM+PE L+ S + D+++ G+ ++EM G+
Sbjct: 158 LID-EMANEFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGR 203
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 63/260 (24%), Positives = 110/260 (42%), Gaps = 46/260 (17%)
Query: 385 EIALLNKINHS-NLIILSGVCFNEGNCYLVY-EYAVNGTLSDWVFSNKNE---------- 432
E+ +L I H N++ L G C G +V E+ G LS ++ S +NE
Sbjct: 71 ELKILIHIGHHLNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPED 130
Query: 433 --GKYLDWKQRIQIALDVATGLNYLHSFTNPPHVHKDINSSNVLLDSDLRAKIANFAMAR 490
+L + I + VA G+ +L S +H+D+ + N+LL KI +F +AR
Sbjct: 131 LYKDFLTLEHLICYSFQVAKGMEFLASRKC---IHRDLAARNILLSEKNVVKICDFGLAR 187
Query: 491 -----PAEGQEGEFALTRHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLILEMLTGKEAA 545
P ++G+ L +MAPE + + + + + DV++FGVL+ E+ + +
Sbjct: 188 DIYKDPDYVRKGDARLPLK------WMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASP 241
Query: 546 ALHAEENNMHLSDVLNAVLTKEDGEESLRHFIDPTLQGNYPLELALLVIRLIDACLKKDP 605
+ + EE R + T + ++D C +P
Sbjct: 242 YPGVKID-----------------EEFCRRLKEGTRMRAPDYTTPEMYQTMLD-CWHGEP 283
Query: 606 TDRPTMYEIEHSLSNILNAS 625
+ RPT E+ L N+L A+
Sbjct: 284 SQRPTFSELVEHLGNLLQAN 303
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 85/170 (50%), Gaps = 20/170 (11%)
Query: 377 KVNGDVSKEIALLNKINHSNLIILSGVCFNEGNCYLVYEYAVNGTLSDWVFSNKNE--GK 434
K N ++ E ++ +++ ++ L G+C L+ + G L D+V +K+ +
Sbjct: 61 KANKEILDEAYVMASVDNPHVCRLLGICLT-STVQLIMQLMPFGCLLDYVREHKDNIGSQ 119
Query: 435 YL-DWKQRIQIALDVATGLNYLHSFTNPPHVHKDINSSNVLLDSDLRAKIANFAMARPAE 493
YL +W + +A G+NYL VH+D+ + NVL+ + KI +F A+
Sbjct: 120 YLLNW------CVQIAKGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGRAKLLG 170
Query: 494 GQEGEFALTRHIVGTK---GYMAPEYLENGLVSTKLDVYAFGVLILEMLT 540
+E E+ H G K +MA E + + + + + DV+++GV + E++T
Sbjct: 171 AEEKEY----HAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 216
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 75/158 (47%), Gaps = 15/158 (9%)
Query: 385 EIALLNKINHSNLIILSGVCFNEGNCYLVYEYAVNGTLSDWVFSN-KNEGKYLDWKQRIQ 443
E +L +N L L + N Y+V EYA G + FS+ + G++ + R
Sbjct: 92 EKRILQAVNFPFLTKLEFSFKDNSNLYMVMEYAPGGEM----FSHLRRIGRFSEPHARFY 147
Query: 444 IALDVATGLNYLHSFTNPPHVHKDINSSNVLLDSDLRAKIANFAMARPAEGQEGEFALTR 503
A V T YLHS +++D+ N+++D K+ +F A+ +G+ T
Sbjct: 148 AAQIVLT-FEYLHSLD---LIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGR------TW 197
Query: 504 HIVGTKGYMAPEYLENGLVSTKLDVYAFGVLILEMLTG 541
+ GT Y+APE + + + +D +A GVLI EM G
Sbjct: 198 XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/158 (28%), Positives = 75/158 (47%), Gaps = 15/158 (9%)
Query: 385 EIALLNKINHSNLIILSGVCFNEGNCYLVYEYAVNGTLSDWVFSN-KNEGKYLDWKQRIQ 443
E +L +N L+ L + N Y+V EY G + FS+ + G++ + R
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEM----FSHLRRIGRFSEPHARFY 146
Query: 444 IALDVATGLNYLHSFTNPPHVHKDINSSNVLLDSDLRAKIANFAMARPAEGQEGEFALTR 503
A V T YLHS +++D+ N+L+D ++ +F A+ +G+ T
Sbjct: 147 AAQIVLT-FEYLHSLD---LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR------TW 196
Query: 504 HIVGTKGYMAPEYLENGLVSTKLDVYAFGVLILEMLTG 541
+ GT Y+APE + + + +D +A GVLI EM G
Sbjct: 197 XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 63/260 (24%), Positives = 110/260 (42%), Gaps = 46/260 (17%)
Query: 385 EIALLNKINHS-NLIILSGVCFNEGNCYLV-YEYAVNGTLSDWVFSNKNE---------- 432
E+ +L I H N++ L G C G +V E+ G LS ++ S +NE
Sbjct: 80 ELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPED 139
Query: 433 --GKYLDWKQRIQIALDVATGLNYLHSFTNPPHVHKDINSSNVLLDSDLRAKIANFAMAR 490
+L + I + VA G+ +L S +H+D+ + N+LL KI +F +AR
Sbjct: 140 LYKDFLTLEHLICYSFQVAKGMEFLASRKC---IHRDLAARNILLSEKNVVKICDFGLAR 196
Query: 491 -----PAEGQEGEFALTRHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLILEMLTGKEAA 545
P ++G+ L +MAPE + + + + + DV++FGVL+ E+ + +
Sbjct: 197 DIYKDPDYVRKGDARLPLK------WMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASP 250
Query: 546 ALHAEENNMHLSDVLNAVLTKEDGEESLRHFIDPTLQGNYPLELALLVIRLIDACLKKDP 605
+ + EE R + T + ++D C +P
Sbjct: 251 YPGVKID-----------------EEFCRRLKEGTRMRAPDYTTPEMYQTMLD-CWHGEP 292
Query: 606 TDRPTMYEIEHSLSNILNAS 625
+ RPT E+ L N+L A+
Sbjct: 293 SQRPTFSELVEHLGNLLQAN 312
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/158 (28%), Positives = 75/158 (47%), Gaps = 15/158 (9%)
Query: 385 EIALLNKINHSNLIILSGVCFNEGNCYLVYEYAVNGTLSDWVFSN-KNEGKYLDWKQRIQ 443
E +L +N L+ L + N Y+V EY G + FS+ + G++ + R
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEM----FSHLRRIGRFSEPHARFY 146
Query: 444 IALDVATGLNYLHSFTNPPHVHKDINSSNVLLDSDLRAKIANFAMARPAEGQEGEFALTR 503
A V T YLHS +++D+ N+L+D ++ +F A+ +G+ T
Sbjct: 147 AAQIVLT-FEYLHSLD---LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR------TW 196
Query: 504 HIVGTKGYMAPEYLENGLVSTKLDVYAFGVLILEMLTG 541
+ GT Y+APE + + + +D +A GVLI EM G
Sbjct: 197 XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/174 (24%), Positives = 86/174 (49%), Gaps = 18/174 (10%)
Query: 375 IKKVNGDVSKEIALLNKI-NHSNLIILSGVCFNEGNCYLVYEYAVNGTLSDWVFSNKNEG 433
+++V +E +L ++ H ++I L + +LV++ G L D++ E
Sbjct: 139 LEEVREATRRETHILRQVAGHPHIITLIDSYESSSFMFLVFDLMRKGELFDYL----TEK 194
Query: 434 KYLDWKQRIQIALDVATGLNYLHSFTNPPHVHKDINSSNVLLDSDLRAKIANFAMARPAE 493
L K+ I + +++LH+ VH+D+ N+LLD +++ ++++F + E
Sbjct: 195 VALSEKETRSIMRSLLEAVSFLHANNI---VHRDLKPENILLDDNMQIRLSDFGFSCHLE 251
Query: 494 GQEGEFALTRHIVGTKGYMAPEYLENGLVST------KLDVYAFGVLILEMLTG 541
E R + GT GY+APE L+ + T ++D++A GV++ +L G
Sbjct: 252 PGEK----LRELCGTPGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAG 301
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 65/257 (25%), Positives = 116/257 (45%), Gaps = 33/257 (12%)
Query: 303 IVVSGSFQANEKPSNKKFDEES---------QDFLESISGVAQ-SLKVYSFKELQS-ATD 351
+V GS N + K ++ES +DFL+ AQ + + F+ +++ T
Sbjct: 14 LVPRGSHMGNAAAAKKGSEQESVKEFLAKAKEDFLKKWESPAQNTAHLDQFERIKTLGTG 73
Query: 352 NFSFTCRIQ----GSVYRGKI--NGGFAAIKKVNGDVSKEIALLNKINHSNLIILSGVCF 405
+F ++ G+ Y KI +K++ ++ E +L +N L+ L
Sbjct: 74 SFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLN-EKRILQAVNFPFLVKLEFSFK 132
Query: 406 NEGNCYLVYEYAVNGTLSDWVFSN-KNEGKYLDWKQRIQIALDVATGLNYLHSFTNPPHV 464
+ N Y+V EY G + FS+ + G++ + R A V T YLHS +
Sbjct: 133 DNSNLYMVMEYVPGGEM----FSHLRRIGRFSEPHARFYAAQIVLT-FEYLHSLD---LI 184
Query: 465 HKDINSSNVLLDSDLRAKIANFAMARPAEGQEGEFALTRHIVGTKGYMAPEYLENGLVST 524
++D+ N+L+D ++ +F A+ +G+ T + GT Y+APE + + +
Sbjct: 185 YRDLKPENLLIDQQGYIQVTDFGFAKRVKGR------TWXLCGTPEYLAPEIILSKGYNK 238
Query: 525 KLDVYAFGVLILEMLTG 541
+D +A GVLI EM G
Sbjct: 239 AVDWWALGVLIYEMAAG 255
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 83/176 (47%), Gaps = 13/176 (7%)
Query: 368 INGGFAAIKKVNGDVSKEIALLNKINHSNLIILSGVCFNEGNCYLVYEYAVNGTLSDWVF 427
IN A + G + +EI+ L + H ++I L V ++ +V EYA N L D++
Sbjct: 47 INKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMVIEYAGN-ELFDYIV 105
Query: 428 SNKNEGKYLDWKQRIQIALDVATGLNYLHSFTNPPHVHKDINSSNVLLDSDLRAKIANFA 487
+ ++ + + + + Y H VH+D+ N+LLD L KIA+F
Sbjct: 106 QRDK----MSEQEARRFFQQIISAVEYCHRHKI---VHRDLKPENLLLDEHLNVKIADFG 158
Query: 488 MARPAEGQEGEFALTRHIVGTKGYMAPEYLENGLVS-TKLDVYAFGVLILEMLTGK 542
++ +G F T G+ Y APE + L + ++DV++ GV++ ML +
Sbjct: 159 LSNIM--TDGNFLKTS--CGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRR 210
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/158 (28%), Positives = 75/158 (47%), Gaps = 15/158 (9%)
Query: 385 EIALLNKINHSNLIILSGVCFNEGNCYLVYEYAVNGTLSDWVFSN-KNEGKYLDWKQRIQ 443
E +L +N L+ L + N Y+V EY G + FS+ + G++ + R
Sbjct: 92 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEM----FSHLRRIGRFSEPHARFY 147
Query: 444 IALDVATGLNYLHSFTNPPHVHKDINSSNVLLDSDLRAKIANFAMARPAEGQEGEFALTR 503
A V T YLHS +++D+ N+L+D ++ +F A+ +G+ T
Sbjct: 148 AAQIVLT-FEYLHSLD---LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR------TW 197
Query: 504 HIVGTKGYMAPEYLENGLVSTKLDVYAFGVLILEMLTG 541
+ GT Y+APE + + + +D +A GVLI EM G
Sbjct: 198 XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 63/260 (24%), Positives = 110/260 (42%), Gaps = 46/260 (17%)
Query: 385 EIALLNKINHS-NLIILSGVCFNEGNCYLV-YEYAVNGTLSDWVFSNKNE---------- 432
E+ +L I H N++ L G C G +V E+ G LS ++ S +NE
Sbjct: 82 ELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKEAPED 141
Query: 433 --GKYLDWKQRIQIALDVATGLNYLHSFTNPPHVHKDINSSNVLLDSDLRAKIANFAMAR 490
+L + I + VA G+ +L S +H+D+ + N+LL KI +F +AR
Sbjct: 142 LYKDFLTLEHLICYSFQVAKGMEFLASRKC---IHRDLAARNILLSEKNVVKICDFGLAR 198
Query: 491 -----PAEGQEGEFALTRHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLILEMLTGKEAA 545
P ++G+ L +MAPE + + + + + DV++FGVL+ E+ + +
Sbjct: 199 DIYKDPDYVRKGDARLPLK------WMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASP 252
Query: 546 ALHAEENNMHLSDVLNAVLTKEDGEESLRHFIDPTLQGNYPLELALLVIRLIDACLKKDP 605
+ + EE R + T + ++D C +P
Sbjct: 253 YPGVKID-----------------EEFCRRLKEGTRMRAPDYTTPEMYQTMLD-CWHGEP 294
Query: 606 TDRPTMYEIEHSLSNILNAS 625
+ RPT E+ L N+L A+
Sbjct: 295 SQRPTFSELVEHLGNLLQAN 314
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/180 (29%), Positives = 91/180 (50%), Gaps = 15/180 (8%)
Query: 365 RGKINGGFAAIKKVNGDVSKEIALLNKINHSNLIILSGVCFNEGNCYLVYEYAVNGTLSD 424
+G+ + I+K + ++ EI+LL ++H N+I L V ++ YLV E+ G L +
Sbjct: 76 KGRYSDDNKNIEKFHEEIYNEISLLKSLDHPNIIKLFDVFEDKKYFYLVTEFYEGGELFE 135
Query: 425 WVFSNKNEGKYLDWKQRIQIALDVATGLNYLHSFTNPPHVHKDINSSNVLLDSD---LRA 481
+ N K+ D I + +G+ YLH VH+DI N+LL++ L
Sbjct: 136 QII---NRHKF-DECDAANIMKQILSGICYLHKHN---IVHRDIKPENILLENKNSLLNI 188
Query: 482 KIANFAMARPAEGQEGEFALTRHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLILEMLTG 541
KI +F ++ ++ L R +GT Y+APE L+ + K DV++ GV++ +L G
Sbjct: 189 KIVDFGLSSFF---SKDYKL-RDRLGTAYYIAPEVLKKK-YNEKCDVWSCGVIMYILLCG 243
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/158 (28%), Positives = 75/158 (47%), Gaps = 15/158 (9%)
Query: 385 EIALLNKINHSNLIILSGVCFNEGNCYLVYEYAVNGTLSDWVFSN-KNEGKYLDWKQRIQ 443
E +L +N L+ L + N Y+V EY G + FS+ + G++ + R
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEM----FSHLRRIGRFSEPHARFY 146
Query: 444 IALDVATGLNYLHSFTNPPHVHKDINSSNVLLDSDLRAKIANFAMARPAEGQEGEFALTR 503
A V T YLHS +++D+ N+L+D ++ +F A+ +G+ T
Sbjct: 147 AAQIVLT-FEYLHSLD---LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR------TW 196
Query: 504 HIVGTKGYMAPEYLENGLVSTKLDVYAFGVLILEMLTG 541
+ GT Y+APE + + + +D +A GVLI EM G
Sbjct: 197 XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/201 (28%), Positives = 95/201 (47%), Gaps = 29/201 (14%)
Query: 361 GSVYRGK--INGGFAAIKKV---NGD------VSKEIALLNKIN---HSNLIILSGVCF- 405
G+VY+ + +G F A+K V NG+ +E+ALL ++ H N++ L VC
Sbjct: 18 GTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLEAFEHPNVVRLMDVCAT 77
Query: 406 ----NEGNCYLVYEYAVNGTLSDWVFSNKNEGKYLDWKQRIQIALDVATGLNYLHSFTNP 461
E LV+E+ V+ L ++ +K L + + GL++LH+
Sbjct: 78 SRTDREIKVTLVFEH-VDQDLRTYL--DKAPPPGLPAETIKDLMRQFLRGLDFLHANCI- 133
Query: 462 PHVHKDINSSNVLLDSDLRAKIANFAMARPAEGQEGEFALTRHIVGTKGYMAPEYLENGL 521
VH+D+ N+L+ S K+A+F +AR Q AL +V T Y APE L
Sbjct: 134 --VHRDLKPENILVTSGGTVKLADFGLARIYSYQ---MALD-PVVVTLWYRAPEVLLQST 187
Query: 522 VSTKLDVYAFGVLILEMLTGK 542
+T +D+++ G + EM K
Sbjct: 188 YATPVDMWSVGCIFAEMFRRK 208
>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|2P0C|B Chain B, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|3BRB|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BRB|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BPR|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|C Chain C, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|D Chain D, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3TCP|A Chain A, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
pdb|3TCP|B Chain B, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
Length = 313
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/248 (21%), Positives = 108/248 (43%), Gaps = 32/248 (12%)
Query: 385 EIALLNKINHSNLIILSGVCFNEGN-----CYLVYEYAVNGTLSDWVFSNKNEG--KYLD 437
E A + +H N+I L GVC + ++ + G L ++ ++ E K++
Sbjct: 86 EAACMKDFSHPNVIRLLGVCIEMSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIP 145
Query: 438 WKQRIQIALDVATGLNYLHSFTNPPHVHKDINSSNVLLDSDLRAKIANFAMARPAEGQEG 497
+ ++ +D+A G+ YL +N +H+D+ + N +L D+ +A+F +++ G
Sbjct: 146 LQTLLKFMVDIALGMEYL---SNRNFLHRDLAARNCMLRDDMTVCVADFGLSKKI--YSG 200
Query: 498 EFALTRHIVGTK-GYMAPEYLENGLVSTKLDVYAFGVLILEMLTGKEAAALHAEENNMHL 556
++ I ++A E L + + ++K DV+AFGV + E+ T + N +
Sbjct: 201 DYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIAT--RGMTPYPGVQNHEM 258
Query: 557 SDVLNAVLTKEDGEESLRHFIDPTLQGNYPLELALLVIRLIDACLKKDPTDRPTMYEIEH 616
D L + E+ L + ++ +C + DP DRPT +
Sbjct: 259 YDYLLHGHRLKQPEDCLDELYE-----------------IMYSCWRTDPLDRPTFSVLRL 301
Query: 617 SLSNILNA 624
L +L +
Sbjct: 302 QLEKLLES 309
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/158 (28%), Positives = 75/158 (47%), Gaps = 15/158 (9%)
Query: 385 EIALLNKINHSNLIILSGVCFNEGNCYLVYEYAVNGTLSDWVFSN-KNEGKYLDWKQRIQ 443
E +L +N L+ L + N Y+V EY G + FS+ + G++ + R
Sbjct: 84 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEM----FSHLRRIGRFXEPHARFY 139
Query: 444 IALDVATGLNYLHSFTNPPHVHKDINSSNVLLDSDLRAKIANFAMARPAEGQEGEFALTR 503
A V T YLHS +++D+ N+L+D ++ +F A+ +G+ T
Sbjct: 140 AAQIVLT-FEYLHSLD---LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR------TW 189
Query: 504 HIVGTKGYMAPEYLENGLVSTKLDVYAFGVLILEMLTG 541
+ GT Y+APE + + + +D +A GVLI EM G
Sbjct: 190 XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 227
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/158 (28%), Positives = 75/158 (47%), Gaps = 15/158 (9%)
Query: 385 EIALLNKINHSNLIILSGVCFNEGNCYLVYEYAVNGTLSDWVFSN-KNEGKYLDWKQRIQ 443
E +L +N L+ L + N Y+V EY G + FS+ + G++ + R
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEM----FSHLRRIGRFSEPHARFY 146
Query: 444 IALDVATGLNYLHSFTNPPHVHKDINSSNVLLDSDLRAKIANFAMARPAEGQEGEFALTR 503
A V T YLHS +++D+ N+L+D ++ +F A+ +G+ T
Sbjct: 147 AAQIVLT-FEYLHSLD---LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR------TW 196
Query: 504 HIVGTKGYMAPEYLENGLVSTKLDVYAFGVLILEMLTG 541
+ GT Y+APE + + + +D +A GVLI EM G
Sbjct: 197 XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 85/170 (50%), Gaps = 20/170 (11%)
Query: 377 KVNGDVSKEIALLNKINHSNLIILSGVCFNEGNCYLVYEYAVNGTLSDWVFSNKNE--GK 434
K N ++ E ++ +++ ++ L G+C L+ + G L D+V +K+ +
Sbjct: 61 KANKEILDEAYVMASVDNPHVCRLLGICLT-STVQLITQLMPFGCLLDYVREHKDNIGSQ 119
Query: 435 YL-DWKQRIQIALDVATGLNYLHSFTNPPHVHKDINSSNVLLDSDLRAKIANFAMARPAE 493
YL +W + +A G+NYL VH+D+ + NVL+ + KI +F A+
Sbjct: 120 YLLNW------CVQIAKGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGRAKLLG 170
Query: 494 GQEGEFALTRHIVGTK---GYMAPEYLENGLVSTKLDVYAFGVLILEMLT 540
+E E+ H G K +MA E + + + + + DV+++GV + E++T
Sbjct: 171 AEEKEY----HAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 216
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/243 (22%), Positives = 105/243 (43%), Gaps = 45/243 (18%)
Query: 393 NHSNLIILSGVCFNEGNCYLVYEYAVNGTLSDWVFS-------------------NKNEG 433
H N++ L G C + G ++ EY G L +++ +K +G
Sbjct: 93 QHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEAMLGPSLAPGQDPEGLDKEDG 152
Query: 434 KYLDWKQRIQIALDVATGLNYLHSFTNPPHVHKDINSSNVLLDSDLRAKIANFAMARPAE 493
+ L+ + + + VA G+ +L S +H+D+ + NVLL + AKI +F +AR
Sbjct: 153 RPLELRDLLHFSSQVAQGMAFLASKNC---IHRDVAARNVLLTNGHVAKIGDFGLARDIM 209
Query: 494 GQEGEFALTRHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLILEMLTGKEAAALHAEENN 553
+ K +MAPE + + + + + DV+++G+L+ E+ + L N
Sbjct: 210 NDSNYIVKGNARLPVK-WMAPESIFDCVYTVQSDVWSYGILLWEIFS----LGL-----N 259
Query: 554 MHLSDVLNAVLTK--EDGEESLRHFIDPTLQGNYPLELALLVIRLIDACLKKDPTDRPTM 611
+ ++N+ K +DG + + P + ++ AC +PT RPT
Sbjct: 260 PYPGILVNSKFYKLVKDGYQMAQPAFAPK-----------NIYSIMQACWALEPTHRPTF 308
Query: 612 YEI 614
+I
Sbjct: 309 QQI 311
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/191 (27%), Positives = 83/191 (43%), Gaps = 21/191 (10%)
Query: 363 VYRGKINGGFA--AIKKVNGDVSK-----EIALLNKINHSNLIILSGVCFNEGNCYLVYE 415
VYR K G A+K + V K EI +L +++H N+I L + LV E
Sbjct: 69 VYRCKQKGTQKPYALKVLKKTVDKKIVRTEIGVLLRLSHPNIIKLKEIFETPTEISLVLE 128
Query: 416 YAVNGTLSDWVFSNKNEGKYLDWKQRIQIALDVATGLNYLHSFTNPPHVHKDINSSNVLL 475
G L D + E Y + + + YLH VH+D+ N+L
Sbjct: 129 LVTGGELFDRIV----EKGYYSERDAADAVKQILEAVAYLHENGI---VHRDLKPENLLY 181
Query: 476 DS---DLRAKIANFAMARPAEGQEGEFALTRHIVGTKGYMAPEYLENGLVSTKLDVYAFG 532
+ D KIA+F +++ E Q L + + GT GY APE L ++D+++ G
Sbjct: 182 ATPAPDAPLKIADFGLSKIVEHQ----VLMKTVCGTPGYCAPEILRGCAYGPEVDMWSVG 237
Query: 533 VLILEMLTGKE 543
++ +L G E
Sbjct: 238 IITYILLCGFE 248
>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Aee788
pdb|2ITU|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Afn941
pdb|2ITV|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Amp-pnp
pdb|2ITZ|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Iressa
Length = 327
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 85/170 (50%), Gaps = 20/170 (11%)
Query: 377 KVNGDVSKEIALLNKINHSNLIILSGVCFNEGNCYLVYEYAVNGTLSDWVFSNKNE--GK 434
K N ++ E ++ +++ ++ L G+C L+ + G L D+V +K+ +
Sbjct: 59 KANKEILDEAYVMASVDNPHVCRLLGICLT-STVQLITQLMPFGCLLDYVREHKDNIGSQ 117
Query: 435 YL-DWKQRIQIALDVATGLNYLHSFTNPPHVHKDINSSNVLLDSDLRAKIANFAMARPAE 493
YL +W + +A G+NYL VH+D+ + NVL+ + KI +F A+
Sbjct: 118 YLLNW------CVQIAKGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGRAKLLG 168
Query: 494 GQEGEFALTRHIVGTK---GYMAPEYLENGLVSTKLDVYAFGVLILEMLT 540
+E E+ H G K +MA E + + + + + DV+++GV + E++T
Sbjct: 169 AEEKEY----HAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 214
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/158 (28%), Positives = 75/158 (47%), Gaps = 15/158 (9%)
Query: 385 EIALLNKINHSNLIILSGVCFNEGNCYLVYEYAVNGTLSDWVFSN-KNEGKYLDWKQRIQ 443
E +L +N L+ L + N Y+V EY G + FS+ + G++ + R
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEM----FSHLRRIGRFXEPHARFY 146
Query: 444 IALDVATGLNYLHSFTNPPHVHKDINSSNVLLDSDLRAKIANFAMARPAEGQEGEFALTR 503
A V T YLHS +++D+ N+L+D ++ +F A+ +G+ T
Sbjct: 147 AAQIVLT-FEYLHSLD---LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR------TW 196
Query: 504 HIVGTKGYMAPEYLENGLVSTKLDVYAFGVLILEMLTG 541
+ GT Y+APE + + + +D +A GVLI EM G
Sbjct: 197 XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 62/242 (25%), Positives = 114/242 (47%), Gaps = 25/242 (10%)
Query: 310 QANEKPSNKKF-DEESQDFLESISGVAQ-SLKVYSFKELQS-ATDNFSFTCRIQ----GS 362
+ +E+ S K+F + +DFL+ AQ + + F+ +++ T +F ++ G+
Sbjct: 9 KGSEQESVKEFLAKAKEDFLKKWENPAQNTAHLDQFERIKTLGTGSFGRVMLVKHMETGN 68
Query: 363 VYRGKI--NGGFAAIKKVNGDVSKEIALLNKINHSNLIILSGVCFNEGNCYLVYEYAVNG 420
Y KI +K++ ++ E +L +N L+ L + N Y+V EY G
Sbjct: 69 HYAMKILDKQKVVKLKQIEHTLN-EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGG 127
Query: 421 TLSDWVFSN-KNEGKYLDWKQRIQIALDVATGLNYLHSFTNPPHVHKDINSSNVLLDSDL 479
+ FS+ + G++ + R A V T YLHS +++D+ N+L+D
Sbjct: 128 EM----FSHLRRIGRFXEPHARFYAAQIVLT-FEYLHSLD---LIYRDLKPENLLIDQQG 179
Query: 480 RAKIANFAMARPAEGQEGEFALTRHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLILEML 539
++ +F A+ +G+ T + GT Y+APE + + + +D +A GVLI EM
Sbjct: 180 YIQVTDFGFAKRVKGR------TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMA 233
Query: 540 TG 541
G
Sbjct: 234 AG 235
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/158 (28%), Positives = 75/158 (47%), Gaps = 15/158 (9%)
Query: 385 EIALLNKINHSNLIILSGVCFNEGNCYLVYEYAVNGTLSDWVFSN-KNEGKYLDWKQRIQ 443
E +L +N L+ L + N Y+V EY G + FS+ + G++ + R
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEM----FSHLRRIGRFXEPHARFY 146
Query: 444 IALDVATGLNYLHSFTNPPHVHKDINSSNVLLDSDLRAKIANFAMARPAEGQEGEFALTR 503
A V T YLHS +++D+ N+L+D ++ +F A+ +G+ T
Sbjct: 147 AAQIVLT-FEYLHSLD---LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR------TW 196
Query: 504 HIVGTKGYMAPEYLENGLVSTKLDVYAFGVLILEMLTG 541
+ GT Y+APE + + + +D +A GVLI EM G
Sbjct: 197 XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 89/204 (43%), Gaps = 13/204 (6%)
Query: 382 VSKEIALLNKINHSNLIILSGVCFNEGNCYLVYEYAVNGTLSDWVFSNKNEGKYLDWKQR 441
+S+ LL + H L+ L Y V +Y G L + + E +L+ + R
Sbjct: 86 MSERNVLLKNVKHPFLVGLHFSFQTADKLYFVLDYINGGEL---FYHLQRERCFLEPRAR 142
Query: 442 IQIALDVATGLNYLHSFTNPPHVHKDINSSNVLLDSDLRAKIANFAMARPAEGQEGEFAL 501
A ++A+ L YLHS V++D+ N+LLDS + +F + + E E +
Sbjct: 143 F-YAAEIASALGYLHSLNI---VYRDLKPENILLDSQGHIVLTDFGLCK--ENIEHN-ST 195
Query: 502 TRHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLILEMLTGKEAAALHAEENNMHLSDVLN 561
T GT Y+APE L +D + G ++ EML G ++ ++LN
Sbjct: 196 TSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYG--LPPFYSRNTAEMYDNILN 253
Query: 562 AVLT-KEDGEESLRHFIDPTLQGN 584
L K + S RH ++ LQ +
Sbjct: 254 KPLQLKPNITNSARHLLEGLLQKD 277
>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In
Complex With Amppnp
Length = 334
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 85/170 (50%), Gaps = 20/170 (11%)
Query: 377 KVNGDVSKEIALLNKINHSNLIILSGVCFNEGNCYLVYEYAVNGTLSDWVFSNKNE--GK 434
K N ++ E ++ +++ ++ L G+C L+ + G L D+V +K+ +
Sbjct: 66 KANKEILDEAYVMASVDNPHVCRLLGICLT-STVQLITQLMPFGCLLDYVREHKDNIGSQ 124
Query: 435 YL-DWKQRIQIALDVATGLNYLHSFTNPPHVHKDINSSNVLLDSDLRAKIANFAMARPAE 493
YL +W + +A G+NYL VH+D+ + NVL+ + KI +F A+
Sbjct: 125 YLLNW------CVQIAKGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGRAKLLG 175
Query: 494 GQEGEFALTRHIVGTK---GYMAPEYLENGLVSTKLDVYAFGVLILEMLT 540
+E E+ H G K +MA E + + + + + DV+++GV + E++T
Sbjct: 176 AEEKEY----HAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 221
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/228 (25%), Positives = 101/228 (44%), Gaps = 31/228 (13%)
Query: 385 EIALLNKINHSNLIILSGVCFN-EGNCYLVYEYAVNGTLSDWVFSNKNEGKYLDWKQRIQ 443
E +L I S ++ F E +L+ +Y G L F++ ++ + + +Q
Sbjct: 108 ERQVLEHIRQSPFLVTLHYAFQTETKLHLILDYINGGEL----FTHLSQRERFT-EHEVQ 162
Query: 444 IAL-DVATGLNYLHSFTNPPHVHKDINSSNVLLDSDLRAKIANFAMARPAEGQEGEFALT 502
I + ++ L +LH +++DI N+LLDS+ + +F +++ E E A
Sbjct: 163 IYVGEIVLALEHLHKLGI---IYRDIKLENILLDSNGHVVLTDFGLSKEFVADETERAYD 219
Query: 503 RHIVGTKGYMAPEYLENGLV--STKLDVYAFGVLILEMLTGKEAAALHAEENNMHLSDVL 560
GT YMAP+ + G +D ++ GVL+ E+LTG + E+N+ +++
Sbjct: 220 --FCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNSQ--AEIS 275
Query: 561 NAVLTKEDGEESLRHFIDPTLQGNYPLELALLVIRLIDACLKKDPTDR 608
+L E P YP E++ L LI L KDP R
Sbjct: 276 RRILKSE-----------PP----YPQEMSALAKDLIQRLLMKDPKKR 308
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/195 (24%), Positives = 89/195 (45%), Gaps = 21/195 (10%)
Query: 354 SFTCRIQGSVYRGKINGGFAAIKKVNGDVSKEIALLNKINHSNLIILSGV-----CFNEG 408
+F + V K++ F +I +E+ LL + H N+I L V E
Sbjct: 41 AFDTKTGHRVAVKKLSRPFQSIIHAKR-TYRELRLLKHMKHENVIGLLDVFTPARSLEEF 99
Query: 409 NCYLVYEYAVNGTLSDWVFSNKNEGKYLDWKQRIQIALDVATGLNYLHSFTNPPHVHKDI 468
N + + + L++ V K ++ + + + GL Y+HS +H+D+
Sbjct: 100 NDVYLVTHLMGADLNNIVKCQKLTDDHVQF-----LIYQILRGLKYIHSADI---IHRDL 151
Query: 469 NSSNVLLDSDLRAKIANFAMARPAEGQEGEFALTRHIVGTKGYMAPEYLENGL-VSTKLD 527
SN+ ++ D KI +F +AR + + F V T+ Y APE + N + + +D
Sbjct: 152 KPSNLAVNEDCELKILDFGLARHTDDEMAGF------VATRWYRAPEIMLNWMHYNQTVD 205
Query: 528 VYAFGVLILEMLTGK 542
+++ G ++ E+LTG+
Sbjct: 206 IWSVGCIMAELLTGR 220
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/158 (28%), Positives = 75/158 (47%), Gaps = 15/158 (9%)
Query: 385 EIALLNKINHSNLIILSGVCFNEGNCYLVYEYAVNGTLSDWVFSN-KNEGKYLDWKQRIQ 443
E +L +N L+ L + N Y+V EY G + FS+ + G++ + R
Sbjct: 92 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEM----FSHLRRIGRFSEPHARFY 147
Query: 444 IALDVATGLNYLHSFTNPPHVHKDINSSNVLLDSDLRAKIANFAMARPAEGQEGEFALTR 503
A V T YLHS +++D+ N+L+D ++ +F A+ +G+ T
Sbjct: 148 AAQIVLT-FEYLHSLD---LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR------TW 197
Query: 504 HIVGTKGYMAPEYLENGLVSTKLDVYAFGVLILEMLTG 541
+ GT Y+APE + + + +D +A GVLI EM G
Sbjct: 198 XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/164 (25%), Positives = 73/164 (44%), Gaps = 15/164 (9%)
Query: 382 VSKEIALLNKINHSNLIILSGVCFNEGNCYLVYEYAVNGTLSDWVFSNKNEGKYLDWKQR 441
+ +E + + H N++ L EG YLV++ G L F + +Y
Sbjct: 77 LEREARICRLLKHPNIVRLHDSISEEGFHYLVFDLVTGGEL----FEDIVAREYYSEADA 132
Query: 442 IQIALDVATGLNYLHSFTNPPHVHKDINSSNVLLDSDLRA---KIANFAMARPAEG-QEG 497
+ +N++H VH+D+ N+LL S + K+A+F +A +G Q+
Sbjct: 133 SHCIHQILESVNHIHQHDI---VHRDLKPENLLLASKCKGAAVKLADFGLAIEVQGEQQA 189
Query: 498 EFALTRHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLILEMLTG 541
F GT GY++PE L +D++A GV++ +L G
Sbjct: 190 WFGFA----GTPGYLSPEVLRKDPYGKPVDIWACGVILYILLVG 229
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/158 (28%), Positives = 75/158 (47%), Gaps = 15/158 (9%)
Query: 385 EIALLNKINHSNLIILSGVCFNEGNCYLVYEYAVNGTLSDWVFSN-KNEGKYLDWKQRIQ 443
E +L +N L+ L + N Y+V EY G + FS+ + G++ + R
Sbjct: 84 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEM----FSHLRRIGRFSEPHARFY 139
Query: 444 IALDVATGLNYLHSFTNPPHVHKDINSSNVLLDSDLRAKIANFAMARPAEGQEGEFALTR 503
A V T YLHS +++D+ N+L+D ++ +F A+ +G+ T
Sbjct: 140 AAQIVLT-FEYLHSLD---LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR------TW 189
Query: 504 HIVGTKGYMAPEYLENGLVSTKLDVYAFGVLILEMLTG 541
+ GT Y+APE + + + +D +A GVLI EM G
Sbjct: 190 XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 227
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 62/242 (25%), Positives = 114/242 (47%), Gaps = 25/242 (10%)
Query: 310 QANEKPSNKKF-DEESQDFLESISGVAQ-SLKVYSFKELQS-ATDNFSFTCRIQ----GS 362
+ +E+ S K+F + +DFL+ AQ + + F+ +++ T +F ++ G+
Sbjct: 9 KGSEQESVKEFLAKAKEDFLKKWESPAQNTAHLDQFERIKTLGTGSFGRVMLVKHKETGN 68
Query: 363 VYRGKI--NGGFAAIKKVNGDVSKEIALLNKINHSNLIILSGVCFNEGNCYLVYEYAVNG 420
Y KI +K++ ++ E +L +N L+ L + N Y+V EY G
Sbjct: 69 HYAMKILDKQKVVKLKQIEHTLN-EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGG 127
Query: 421 TLSDWVFSN-KNEGKYLDWKQRIQIALDVATGLNYLHSFTNPPHVHKDINSSNVLLDSDL 479
+ FS+ + G++ + R A V T YLHS +++D+ N+L+D
Sbjct: 128 EM----FSHLRRIGRFSEPHARFYAAQIVLT-FEYLHSLD---LIYRDLKPENLLIDQQG 179
Query: 480 RAKIANFAMARPAEGQEGEFALTRHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLILEML 539
++ +F A+ +G+ T + GT Y+APE + + + +D +A GVLI EM
Sbjct: 180 YIQVTDFGFAKRVKGR------TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMA 233
Query: 540 TG 541
G
Sbjct: 234 AG 235
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/158 (28%), Positives = 75/158 (47%), Gaps = 15/158 (9%)
Query: 385 EIALLNKINHSNLIILSGVCFNEGNCYLVYEYAVNGTLSDWVFSN-KNEGKYLDWKQRIQ 443
E +L +N L+ L + N Y+V EY G + FS+ + G++ + R
Sbjct: 91 EKRILQAVNFPFLVKLEYSFKDNSNLYMVMEYVPGGEM----FSHLRRIGRFSEPHARFY 146
Query: 444 IALDVATGLNYLHSFTNPPHVHKDINSSNVLLDSDLRAKIANFAMARPAEGQEGEFALTR 503
A V T YLHS +++D+ N+L+D ++ +F A+ +G+ T
Sbjct: 147 AAQIVLT-FEYLHSLD---LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR------TW 196
Query: 504 HIVGTKGYMAPEYLENGLVSTKLDVYAFGVLILEMLTG 541
+ GT Y+APE + + + +D +A GVLI EM G
Sbjct: 197 XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/158 (28%), Positives = 75/158 (47%), Gaps = 15/158 (9%)
Query: 385 EIALLNKINHSNLIILSGVCFNEGNCYLVYEYAVNGTLSDWVFSN-KNEGKYLDWKQRIQ 443
E +L +N L+ L + N Y+V EY G + FS+ + G++ + R
Sbjct: 91 EKRILQAVNFPFLVKLEYSFKDNSNLYMVMEYVPGGEM----FSHLRRIGRFSEPHARFY 146
Query: 444 IALDVATGLNYLHSFTNPPHVHKDINSSNVLLDSDLRAKIANFAMARPAEGQEGEFALTR 503
A V T YLHS +++D+ N+L+D ++ +F A+ +G+ T
Sbjct: 147 AAQIVLT-FEYLHSLD---LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR------TW 196
Query: 504 HIVGTKGYMAPEYLENGLVSTKLDVYAFGVLILEMLTG 541
+ GT Y+APE + + + +D +A GVLI EM G
Sbjct: 197 XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/195 (24%), Positives = 89/195 (45%), Gaps = 21/195 (10%)
Query: 354 SFTCRIQGSVYRGKINGGFAAIKKVNGDVSKEIALLNKINHSNLIILSGV-----CFNEG 408
+F + V K++ F +I +E+ LL + H N+I L V E
Sbjct: 41 AFDTKTGHRVAVKKLSRPFQSIIHAKR-TYRELRLLKHMKHENVIGLLDVFTPARSLEEF 99
Query: 409 NCYLVYEYAVNGTLSDWVFSNKNEGKYLDWKQRIQIALDVATGLNYLHSFTNPPHVHKDI 468
N + + + L++ V K ++ + + + GL Y+HS +H+D+
Sbjct: 100 NDVYLVTHLMGADLNNIVKCQKLTDDHVQF-----LIYQILRGLKYIHSADI---IHRDL 151
Query: 469 NSSNVLLDSDLRAKIANFAMARPAEGQEGEFALTRHIVGTKGYMAPEYLENGL-VSTKLD 527
SN+ ++ D KI +F +AR + + F V T+ Y APE + N + + +D
Sbjct: 152 KPSNLAVNEDCELKILDFGLARHTDDEMAGF------VATRWYRAPEIMLNWMHYNQTVD 205
Query: 528 VYAFGVLILEMLTGK 542
+++ G ++ E+LTG+
Sbjct: 206 IWSVGCIMAELLTGR 220
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/158 (28%), Positives = 75/158 (47%), Gaps = 15/158 (9%)
Query: 385 EIALLNKINHSNLIILSGVCFNEGNCYLVYEYAVNGTLSDWVFSN-KNEGKYLDWKQRIQ 443
E +L +N L+ L + N Y+V EY G + FS+ + G++ + R
Sbjct: 92 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEM----FSHLRRIGRFSEPHARFY 147
Query: 444 IALDVATGLNYLHSFTNPPHVHKDINSSNVLLDSDLRAKIANFAMARPAEGQEGEFALTR 503
A V T YLHS +++D+ N+L+D ++ +F A+ +G+ T
Sbjct: 148 AAQIVLT-FEYLHSLD---LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR------TW 197
Query: 504 HIVGTKGYMAPEYLENGLVSTKLDVYAFGVLILEMLTG 541
+ GT Y+APE + + + +D +A GVLI EM G
Sbjct: 198 XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/158 (28%), Positives = 75/158 (47%), Gaps = 15/158 (9%)
Query: 385 EIALLNKINHSNLIILSGVCFNEGNCYLVYEYAVNGTLSDWVFSN-KNEGKYLDWKQRIQ 443
E +L +N L+ L + N Y+V EY G + FS+ + G++ + R
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEM----FSHLRRIGRFSEPHARFY 146
Query: 444 IALDVATGLNYLHSFTNPPHVHKDINSSNVLLDSDLRAKIANFAMARPAEGQEGEFALTR 503
A V T YLHS +++D+ N+L+D ++ +F A+ +G+ T
Sbjct: 147 AAQIVLT-FEYLHSLD---LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR------TW 196
Query: 504 HIVGTKGYMAPEYLENGLVSTKLDVYAFGVLILEMLTG 541
+ GT Y+APE + + + +D +A GVLI EM G
Sbjct: 197 XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/158 (28%), Positives = 75/158 (47%), Gaps = 15/158 (9%)
Query: 385 EIALLNKINHSNLIILSGVCFNEGNCYLVYEYAVNGTLSDWVFSN-KNEGKYLDWKQRIQ 443
E +L +N L+ L + N Y+V EY G + FS+ + G++ + R
Sbjct: 91 EKRILQAVNFPFLVKLEYSFKDNSNLYMVMEYVPGGEM----FSHLRRIGRFSEPHARFY 146
Query: 444 IALDVATGLNYLHSFTNPPHVHKDINSSNVLLDSDLRAKIANFAMARPAEGQEGEFALTR 503
A V T YLHS +++D+ N+L+D ++ +F A+ +G+ T
Sbjct: 147 AAQIVLT-FEYLHSLD---LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR------TW 196
Query: 504 HIVGTKGYMAPEYLENGLVSTKLDVYAFGVLILEMLTG 541
+ GT Y+APE + + + +D +A GVLI EM G
Sbjct: 197 XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 62/242 (25%), Positives = 114/242 (47%), Gaps = 25/242 (10%)
Query: 310 QANEKPSNKKF-DEESQDFLESISGVAQ-SLKVYSFKELQS-ATDNFSFTCRIQ----GS 362
+ +E+ S K+F + +DFL+ AQ + + F+ +++ T +F ++ G+
Sbjct: 9 KGSEQESVKEFLAKAKEDFLKKWENPAQNTAHLDQFERIKTLGTGSFGRVMLVKHMETGN 68
Query: 363 VYRGKI--NGGFAAIKKVNGDVSKEIALLNKINHSNLIILSGVCFNEGNCYLVYEYAVNG 420
Y KI +K++ ++ E +L +N L+ L + N Y+V EY G
Sbjct: 69 HYAMKILDKQKVVKLKQIEHTLN-EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGG 127
Query: 421 TLSDWVFSN-KNEGKYLDWKQRIQIALDVATGLNYLHSFTNPPHVHKDINSSNVLLDSDL 479
+ FS+ + G++ + R A V T YLHS +++D+ N+L+D
Sbjct: 128 EM----FSHLRRIGRFSEPHARFYAAQIVLT-FEYLHSLD---LIYRDLKPENLLIDQQG 179
Query: 480 RAKIANFAMARPAEGQEGEFALTRHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLILEML 539
++ +F A+ +G+ T + GT Y+APE + + + +D +A GVLI EM
Sbjct: 180 YIQVTDFGFAKRVKGR------TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMA 233
Query: 540 TG 541
G
Sbjct: 234 AG 235
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/158 (28%), Positives = 75/158 (47%), Gaps = 15/158 (9%)
Query: 385 EIALLNKINHSNLIILSGVCFNEGNCYLVYEYAVNGTLSDWVFSN-KNEGKYLDWKQRIQ 443
E +L +N L+ L + N Y+V EY G + FS+ + G++ + R
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEM----FSHLRRIGRFSEPHARFY 146
Query: 444 IALDVATGLNYLHSFTNPPHVHKDINSSNVLLDSDLRAKIANFAMARPAEGQEGEFALTR 503
A V T YLHS +++D+ N+L+D ++ +F A+ +G+ T
Sbjct: 147 AAQIVLT-FEYLHSLD---LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR------TW 196
Query: 504 HIVGTKGYMAPEYLENGLVSTKLDVYAFGVLILEMLTG 541
+ GT Y+APE + + + +D +A GVLI EM G
Sbjct: 197 XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 93/204 (45%), Gaps = 32/204 (15%)
Query: 361 GSVYRGK--INGGFAAIKKVNG------------DVSKEIALLNKIN---HSNLIILSGV 403
G+VY+ + +G F A+K V +E+ALL ++ H N++ L V
Sbjct: 23 GTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRLEAFEHPNVVRLMDV 82
Query: 404 CF-----NEGNCYLVYEYAVNGTLSDWVFSNKNEGKYLDWKQRIQIALDVATGLNYLHSF 458
C E LV+E+ V+ L ++ +K L + + GL++LH+
Sbjct: 83 CATSRTDREIKVTLVFEH-VDQDLRTYL--DKAPPPGLPAETIKDLMRQFLRGLDFLHAN 139
Query: 459 TNPPHVHKDINSSNVLLDSDLRAKIANFAMARPAEGQEGEFALTRHIVGTKGYMAPEYLE 518
VH+D+ N+L+ S K+A+F +AR Q ALT +V T Y APE L
Sbjct: 140 CI---VHRDLKPENILVTSGGTVKLADFGLARIYSYQ---MALT-PVVVTLWYRAPEVLL 192
Query: 519 NGLVSTKLDVYAFGVLILEMLTGK 542
+T +D+++ G + EM K
Sbjct: 193 QSTYATPVDMWSVGCIFAEMFRRK 216
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/158 (28%), Positives = 75/158 (47%), Gaps = 15/158 (9%)
Query: 385 EIALLNKINHSNLIILSGVCFNEGNCYLVYEYAVNGTLSDWVFSN-KNEGKYLDWKQRIQ 443
E +L +N L+ L + N Y+V EY G + FS+ + G++ + R
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEM----FSHLRRIGRFSEPHARFY 146
Query: 444 IALDVATGLNYLHSFTNPPHVHKDINSSNVLLDSDLRAKIANFAMARPAEGQEGEFALTR 503
A V T YLHS +++D+ N+L+D ++ +F A+ +G+ T
Sbjct: 147 AAQIVLT-FEYLHSLD---LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR------TW 196
Query: 504 HIVGTKGYMAPEYLENGLVSTKLDVYAFGVLILEMLTG 541
+ GT Y+APE + + + +D +A GVLI EM G
Sbjct: 197 XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/158 (27%), Positives = 75/158 (47%), Gaps = 15/158 (9%)
Query: 385 EIALLNKINHSNLIILSGVCFNEGNCYLVYEYAVNGTLSDWVFSN-KNEGKYLDWKQRIQ 443
E +L +N L+ L + N Y+V EY G + FS+ + G++ + R
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEM----FSHLRRIGRFSEPHARFY 146
Query: 444 IALDVATGLNYLHSFTNPPHVHKDINSSNVLLDSDLRAKIANFAMARPAEGQEGEFALTR 503
A V T YLHS +++D+ N+++D ++ +F A+ +G+ T
Sbjct: 147 AAQIVLT-FEYLHSLD---LIYRDLKPENLIIDQQGYIQVTDFGFAKRVKGR------TW 196
Query: 504 HIVGTKGYMAPEYLENGLVSTKLDVYAFGVLILEMLTG 541
+ GT Y+APE + + + +D +A GVLI EM G
Sbjct: 197 XLCGTPEYLAPEIIISKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 63/270 (23%), Positives = 112/270 (41%), Gaps = 52/270 (19%)
Query: 367 KINGGFAAIKKVNGDVSKE-----IALLNKINHSN----LIILSGVCFNEGNCYLVYE-- 415
K +G A+K++ V ++ + L+ + S+ ++ G F EG+C++ E
Sbjct: 44 KPSGQIMAVKRIRSTVDEKEQKQLLMDLDVVMRSSDCPYIVQFYGALFREGDCWICMELM 103
Query: 416 -------YAVNGTLSDWVFSNKNEGKYLDWKQRIQIALDVATGLNYLHSFTNPPHVHKDI 468
Y ++ D V + GK I L LN+L N +H+DI
Sbjct: 104 STSFDKFYKYVYSVLDDVIPEEILGK---------ITLATVKALNHLKE--NLKIIHRDI 152
Query: 469 NSSNVLLDSDLRAKIANFAMARPAEGQEGEFALTRHIVGTKGYMAPEYLENGL----VST 524
SN+LLD K+ +F ++ GQ + G + YMAPE ++
Sbjct: 153 KPSNILLDRSGNIKLCDFGIS----GQLVDSIAKTRDAGCRPYMAPERIDPSASRQGYDV 208
Query: 525 KLDVYAFGVLILEMLTGKEAAALHAEENNMHLSDVLNAVLTKEDGEESLRHFIDPTLQGN 584
+ DV++ G+ + E+ TG+ + + N++ D L V+ + P L +
Sbjct: 209 RSDVWSLGITLYELATGRFP---YPKWNSVF--DQLTQVVKGD----------PPQLSNS 253
Query: 585 YPLELALLVIRLIDACLKKDPTDRPTMYEI 614
E + I ++ CL KD + RP E+
Sbjct: 254 EEREFSPSFINFVNLCLTKDESKRPKYKEL 283
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 79/165 (47%), Gaps = 20/165 (12%)
Query: 384 KEIALLNKINHSNLIILSGV-----CFNEGNCYLVYEYAVNGTLSDWVFSNKNEGKYLDW 438
+E+ LL + H N+I L V E N + + + L++ V K ++ +
Sbjct: 66 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF 125
Query: 439 KQRIQIALDVATGLNYLHSFTNPPHVHKDINSSNVLLDSDLRAKIANFAMARPAEGQEGE 498
+ + GL Y+HS +H+D+ SN+ ++ D KI +F +AR + +
Sbjct: 126 -----LIYQILRGLKYIHSADI---IHRDLKPSNLAVNEDCELKILDFGLARHTDDEMAG 177
Query: 499 FALTRHIVGTKGYMAPEYLENGL-VSTKLDVYAFGVLILEMLTGK 542
F V T+ Y APE + N + + +D+++ G ++ E+LTG+
Sbjct: 178 F------VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 62/242 (25%), Positives = 114/242 (47%), Gaps = 25/242 (10%)
Query: 310 QANEKPSNKKF-DEESQDFLESISGVAQ-SLKVYSFKELQS-ATDNFSFTCRIQ----GS 362
+ +E+ S K+F + +DFL+ AQ + + F+ +++ T +F ++ G+
Sbjct: 9 KGSEQESVKEFLAKAKEDFLKKWENPAQNTAHLDQFERIKTLGTGSFGRVMLVKHMETGN 68
Query: 363 VYRGKI--NGGFAAIKKVNGDVSKEIALLNKINHSNLIILSGVCFNEGNCYLVYEYAVNG 420
Y KI +K++ ++ E +L +N L+ L + N Y+V EY G
Sbjct: 69 HYAMKILDKQKVVKLKQIEHTLN-EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGG 127
Query: 421 TLSDWVFSN-KNEGKYLDWKQRIQIALDVATGLNYLHSFTNPPHVHKDINSSNVLLDSDL 479
+ FS+ + G++ + R A V T YLHS +++D+ N+L+D
Sbjct: 128 EM----FSHLRRIGRFSEPHARFYAAQIVLT-FEYLHSLD---LIYRDLKPENLLIDQQG 179
Query: 480 RAKIANFAMARPAEGQEGEFALTRHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLILEML 539
++ +F A+ +G+ T + GT Y+APE + + + +D +A GVLI EM
Sbjct: 180 YIQVTDFGFAKRVKGR------TWTLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMA 233
Query: 540 TG 541
G
Sbjct: 234 AG 235
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 45/181 (24%), Positives = 89/181 (49%), Gaps = 20/181 (11%)
Query: 370 GGFAA--IKKVNGDVSKEIALLNKIN-HSNLIILSGVCFNEGNCYLVYEYAVNGTLSDWV 426
G F+A ++++ KE+ +L K++ H N+I L +LV++ G L D++
Sbjct: 43 GSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYL 102
Query: 427 FSNKNEGKYLDWKQRIQIALDVATGLNYLHSFTNPPHVHKDINSSNVLLDSDLRAKIANF 486
+ K + ++ ++ L+V L+ L+ VH+D+ N+LLD D+ K+ +F
Sbjct: 103 -TEKVTLSEKETRKIMRALLEVICALHKLNI------VHRDLKPENILLDDDMNIKLTDF 155
Query: 487 AMARPAEGQEGEFALTRHIVGTKGYMAPEYLENGL------VSTKLDVYAFGVLILEMLT 540
+ + E R + GT Y+APE +E + ++D+++ GV++ +L
Sbjct: 156 GFSCQLDPGEK----LREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLA 211
Query: 541 G 541
G
Sbjct: 212 G 212
>pdb|4FVR|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain Mutant
V617f (Mg- Atp-Bound Form)
Length = 289
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/242 (22%), Positives = 110/242 (45%), Gaps = 29/242 (11%)
Query: 387 ALLNKINHSNLIILSGVCFNEGNCYLVYEYAVNGTLSDWVFSNKNEGKYLDWKQRIQIAL 446
++++K++H +L++ GVCF LV E+ G+L ++ NKN L WK +++A
Sbjct: 64 SMMSKLSHKHLVLNYGVCFCGDENILVQEFVKFGSLDTYLKKNKNCINIL-WK--LEVAK 120
Query: 447 DVATGLNYLHSFTNPPHVHKDINSSNVLLDSDLRAKIANFAMARPAEGQEGEFALTRHIV 506
+A +++L T +H ++ + N+LL + K N + ++ L + I+
Sbjct: 121 QLAWAMHFLEENT---LIHGNVCAKNILLIREEDRKTGNPPFIKLSDPGISITVLPKDIL 177
Query: 507 GTK-GYMAPEYLENGL-VSTKLDVYAFGVLILEMLTGKEAAALHAEENNMHLSDVLNAVL 564
+ ++ PE +EN ++ D ++FG + E+ +G + L
Sbjct: 178 QERIPWVPPECIENPKNLNLATDKWSFGTTLWEICSGGDKP------------------L 219
Query: 565 TKEDGEESLRHFIDPTLQGNYPLELALLVIRLIDACLKKDPTDRPTMYEIEHSLSNILNA 624
+ D + L+ + D + P A + LI+ C+ +P RP+ I L+++
Sbjct: 220 SALDSQRKLQFYED---RHQLPAPKAAELANLINNCMDYEPDHRPSFRAIIRDLNSLFTP 276
Query: 625 SL 626
L
Sbjct: 277 DL 278
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 44/158 (27%), Positives = 75/158 (47%), Gaps = 15/158 (9%)
Query: 385 EIALLNKINHSNLIILSGVCFNEGNCYLVYEYAVNGTLSDWVFSN-KNEGKYLDWKQRIQ 443
E +L +N L+ L + N Y+V EY G + FS+ + G++ + R
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEM----FSHLRRIGRFSEPHARFY 146
Query: 444 IALDVATGLNYLHSFTNPPHVHKDINSSNVLLDSDLRAKIANFAMARPAEGQEGEFALTR 503
A V T YLHS +++D+ N+L+D ++ +F A+ +G+ T
Sbjct: 147 AAQIVLT-FEYLHSLD---LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR------TW 196
Query: 504 HIVGTKGYMAPEYLENGLVSTKLDVYAFGVLILEMLTG 541
+ GT Y+APE + + + +D +A GVLI +M G
Sbjct: 197 XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYQMAAG 234
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 45/158 (28%), Positives = 75/158 (47%), Gaps = 15/158 (9%)
Query: 385 EIALLNKINHSNLIILSGVCFNEGNCYLVYEYAVNGTLSDWVFSN-KNEGKYLDWKQRIQ 443
E +L +N L+ L + N Y+V EY G + FS+ + G++ + R
Sbjct: 77 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEM----FSHLRRIGRFSEPHARFY 132
Query: 444 IALDVATGLNYLHSFTNPPHVHKDINSSNVLLDSDLRAKIANFAMARPAEGQEGEFALTR 503
A V T YLHS +++D+ N+L+D ++ +F A+ +G+ T
Sbjct: 133 AAQIVLT-FEYLHSLD---LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR------TW 182
Query: 504 HIVGTKGYMAPEYLENGLVSTKLDVYAFGVLILEMLTG 541
+ GT Y+APE + + + +D +A GVLI EM G
Sbjct: 183 TLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 220
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 45/181 (24%), Positives = 89/181 (49%), Gaps = 20/181 (11%)
Query: 370 GGFAA--IKKVNGDVSKEIALLNKIN-HSNLIILSGVCFNEGNCYLVYEYAVNGTLSDWV 426
G F+A ++++ KE+ +L K++ H N+I L +LV++ G L D++
Sbjct: 56 GSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYL 115
Query: 427 FSNKNEGKYLDWKQRIQIALDVATGLNYLHSFTNPPHVHKDINSSNVLLDSDLRAKIANF 486
+ K + ++ ++ L+V L+ L+ VH+D+ N+LLD D+ K+ +F
Sbjct: 116 -TEKVTLSEKETRKIMRALLEVICALHKLNI------VHRDLKPENILLDDDMNIKLTDF 168
Query: 487 AMARPAEGQEGEFALTRHIVGTKGYMAPEYLENGL------VSTKLDVYAFGVLILEMLT 540
+ + E R + GT Y+APE +E + ++D+++ GV++ +L
Sbjct: 169 GFSCQLDPGEK----LREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLA 224
Query: 541 G 541
G
Sbjct: 225 G 225
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 45/158 (28%), Positives = 74/158 (46%), Gaps = 15/158 (9%)
Query: 385 EIALLNKINHSNLIILSGVCFNEGNCYLVYEYAVNGTLSDWVFSN-KNEGKYLDWKQRIQ 443
E +L +N L+ L + N Y+V EY G + FS+ + G++ + R
Sbjct: 112 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEM----FSHLRRIGRFSEPHARFY 167
Query: 444 IALDVATGLNYLHSFTNPPHVHKDINSSNVLLDSDLRAKIANFAMARPAEGQEGEFALTR 503
A V T YLHS +++D+ N+L+D ++ +F A+ +G T
Sbjct: 168 AAQIVLT-FEYLHSLD---LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGA------TW 217
Query: 504 HIVGTKGYMAPEYLENGLVSTKLDVYAFGVLILEMLTG 541
+ GT Y+APE + + + +D +A GVLI EM G
Sbjct: 218 TLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 255
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 85/207 (41%), Gaps = 39/207 (18%)
Query: 365 RGKINGGFAAIKKVNGDVSK------EIALLNKINHSNLIILSGVCFNEGN--------- 409
R ++ + AIKK+ K E+ LL +NH ++ N
Sbjct: 26 RNALDSRYYAIKKIRHTEEKLSTILSEVMLLASLNHQYVVRYYAAWLERRNFVKPMTAVK 85
Query: 410 ----CYLVYEYAVNGTLSDWVFS-NKNEGKYLDWKQRIQIALDVATGLNYLHSFTNPPHV 464
++ EY NGTL D + S N N+ + W+ QI L+Y+HS +
Sbjct: 86 KKSTLFIQMEYCENGTLYDLIHSENLNQQRDEYWRLFRQIL----EALSYIHS---QGII 138
Query: 465 HKDINSSNVLLDSDLRAKIANFAMARPAEGQEGEFALTRH-----------IVGTKGYMA 513
H+D+ N+ +D KI +F +A+ L +GT Y+A
Sbjct: 139 HRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAMYVA 198
Query: 514 PEYLE-NGLVSTKLDVYAFGVLILEML 539
E L+ G + K+D+Y+ G++ EM+
Sbjct: 199 TEVLDGTGHYNEKIDMYSLGIIFFEMI 225
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 45/164 (27%), Positives = 82/164 (50%), Gaps = 20/164 (12%)
Query: 384 KEIALLNKINHSNLIILSGVCFNEG------NCYLVYEYAVNGTLSDWVFSNKNEGKYLD 437
+E+ L+ +NH N+I L V + + Y+V E ++ LS + LD
Sbjct: 72 RELVLMKVVNHKNIIGLLNVFTPQKSLEEFQDVYIVME-LMDANLSQVIQME------LD 124
Query: 438 WKQRIQIALDVATGLNYLHSFTNPPHVHKDINSSNVLLDSDLRAKIANFAMARPAEGQEG 497
++ + + G+ +LHS +H+D+ SN+++ SD KI +F +AR A
Sbjct: 125 HERMSYLLYQMLVGIKHLHSAGI---IHRDLKPSNIVVKSDATLKILDFGLARTAGTS-- 179
Query: 498 EFALTRHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLILEMLTG 541
F +T ++V T+ Y APE + +D+++ GV++ EM+ G
Sbjct: 180 -FMMTPYVV-TRYYRAPEVILGMGYKENVDIWSVGVIMGEMIKG 221
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 52/96 (54%), Gaps = 4/96 (4%)
Query: 448 VATGLNYLHSFTNPPHVHKDINSSNVLLDSDLRAKIANFAMARPAEGQEGEFALTRHIVG 507
+ GL Y+HS +H+D+ SN+LL++ KI +F +AR A+ V
Sbjct: 137 ILRGLKYIHSANV---LHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEXVA 193
Query: 508 TKGYMAPEYLENGLVSTK-LDVYAFGVLILEMLTGK 542
T+ Y APE + N TK +D+++ G ++ EML+ +
Sbjct: 194 TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 52/96 (54%), Gaps = 4/96 (4%)
Query: 448 VATGLNYLHSFTNPPHVHKDINSSNVLLDSDLRAKIANFAMARPAEGQEGEFALTRHIVG 507
+ GL Y+HS +H+D+ SN+LL++ KI +F +AR A+ V
Sbjct: 138 ILRGLKYIHSANV---LHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEXVA 194
Query: 508 TKGYMAPEYLENGLVSTK-LDVYAFGVLILEMLTGK 542
T+ Y APE + N TK +D+++ G ++ EML+ +
Sbjct: 195 TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 230
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 47/207 (22%), Positives = 87/207 (42%), Gaps = 39/207 (18%)
Query: 365 RGKINGGFAAIKKVN--------GDVSKEIALLNKINHSNLIILSGVCFNEGNC------ 410
+ K++ AIK++ V +E+ L K+ H ++ +
Sbjct: 25 KNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLEKNTTEKLQPS 84
Query: 411 ------YLVYEYAVNGTLSDWVFSNKNEGKYLDWKQR---IQIALDVATGLNYLHSFTNP 461
Y+ + L DW+ N ++ ++R + I L +A + +LHS
Sbjct: 85 SPKVYLYIQMQLCRKENLKDWM----NGRCTIEERERSVCLHIFLQIAEAVEFLHS---K 137
Query: 462 PHVHKDINSSNVLLDSDLRAKIANFAMARPAEGQEGEF-------ALTRHI--VGTKGYM 512
+H+D+ SN+ D K+ +F + + E E A RH VGTK YM
Sbjct: 138 GLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYARHTGQVGTKLYM 197
Query: 513 APEYLENGLVSTKLDVYAFGVLILEML 539
+PE + S K+D+++ G+++ E+L
Sbjct: 198 SPEQIHGNSYSHKVDIFSLGLILFELL 224
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 36/118 (30%), Positives = 58/118 (49%), Gaps = 10/118 (8%)
Query: 448 VATGLNYLHSFTNPPHVHKDINSSNVLLDSDLRAKIANFAMARPAEGQEGEFALTRHIVG 507
+ GL Y+HS +H+D+ SN+LL++ KI +F +AR A+ V
Sbjct: 137 ILRGLKYIHSANV---LHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVA 193
Query: 508 TKGYMAPEYLENGLVSTK-LDVYAFGVLILEMLTGKEAAALHAEENNMHLSDVLNAVL 564
T+ Y APE + N TK +D+++ G ++ EML+ + H D LN +L
Sbjct: 194 TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFP------GKHYLDQLNHIL 245
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 47/185 (25%), Positives = 82/185 (44%), Gaps = 15/185 (8%)
Query: 361 GSVYRGKINGGFAAIKKVNGDVSKEIALLNKINHSNLIILSGVCFNEGNCYLVYEYAVNG 420
G Y KI + + + +E + + HSN++ L EG YLV++ G
Sbjct: 29 GHEYAAKIINTKKLSARDHQKLEREARICRLLKHSNIVRLHDSISEEGFHYLVFDLVTGG 88
Query: 421 TLSDWVFSNKNEGKYLDWKQRIQIALDVATGLNYLHSFTNPPHVHKDINSSNVLLDSDLR 480
L + + + + + D IQ L+ + + VH+D+ N+LL S +
Sbjct: 89 ELFEDIVAREYYSE-ADASHCIQQILEAVLHCHQMGV------VHRDLKPENLLLASKCK 141
Query: 481 A---KIANFAMARPAEG-QEGEFALTRHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLIL 536
K+A+F +A +G Q+ F GT GY++PE L +D++A GV++
Sbjct: 142 GAAVKLADFGLAIEVQGDQQAWFGFA----GTPGYLSPEVLRKEAYGKPVDIWACGVILY 197
Query: 537 EMLTG 541
+L G
Sbjct: 198 ILLVG 202
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 45/164 (27%), Positives = 82/164 (50%), Gaps = 20/164 (12%)
Query: 384 KEIALLNKINHSNLIILSGVCFNEG------NCYLVYEYAVNGTLSDWVFSNKNEGKYLD 437
+E+ L+ +NH N+I L V + + Y+V E ++ LS + LD
Sbjct: 72 RELVLMKVVNHKNIIGLLNVFTPQKSLEEFQDVYIVME-LMDANLSQVIQME------LD 124
Query: 438 WKQRIQIALDVATGLNYLHSFTNPPHVHKDINSSNVLLDSDLRAKIANFAMARPAEGQEG 497
++ + + G+ +LHS +H+D+ SN+++ SD KI +F +AR A
Sbjct: 125 HERMSYLLYQMLVGIKHLHSAGI---IHRDLKPSNIVVKSDATLKILDFGLARTAGTS-- 179
Query: 498 EFALTRHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLILEMLTG 541
F +T ++V T+ Y APE + +D+++ GV++ EM+ G
Sbjct: 180 -FMMTPYVV-TRYYRAPEVILGMGYKENVDIWSVGVIMGEMIKG 221
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 36/118 (30%), Positives = 58/118 (49%), Gaps = 10/118 (8%)
Query: 448 VATGLNYLHSFTNPPHVHKDINSSNVLLDSDLRAKIANFAMARPAEGQEGEFALTRHIVG 507
+ GL Y+HS +H+D+ SN+LL++ KI +F +AR A+ V
Sbjct: 135 ILRGLKYIHSANV---LHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVA 191
Query: 508 TKGYMAPEYLENGLVSTK-LDVYAFGVLILEMLTGKEAAALHAEENNMHLSDVLNAVL 564
T+ Y APE + N TK +D+++ G ++ EML+ + H D LN +L
Sbjct: 192 TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFP------GKHYLDQLNHIL 243
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 52/96 (54%), Gaps = 4/96 (4%)
Query: 448 VATGLNYLHSFTNPPHVHKDINSSNVLLDSDLRAKIANFAMARPAEGQEGEFALTRHIVG 507
+ GL Y+HS +H+D+ SN+LL++ KI +F +AR A+ V
Sbjct: 135 ILRGLKYIHSANV---LHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVA 191
Query: 508 TKGYMAPEYLENGLVSTK-LDVYAFGVLILEMLTGK 542
T+ Y APE + N TK +D+++ G ++ EML+ +
Sbjct: 192 TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 227
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 36/118 (30%), Positives = 58/118 (49%), Gaps = 10/118 (8%)
Query: 448 VATGLNYLHSFTNPPHVHKDINSSNVLLDSDLRAKIANFAMARPAEGQEGEFALTRHIVG 507
+ GL Y+HS +H+D+ SN+LL++ KI +F +AR A+ V
Sbjct: 137 ILRGLKYIHSANV---LHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVA 193
Query: 508 TKGYMAPEYLENGLVSTK-LDVYAFGVLILEMLTGKEAAALHAEENNMHLSDVLNAVL 564
T+ Y APE + N TK +D+++ G ++ EML+ + H D LN +L
Sbjct: 194 TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFP------GKHYLDQLNHIL 245
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 36/118 (30%), Positives = 58/118 (49%), Gaps = 10/118 (8%)
Query: 448 VATGLNYLHSFTNPPHVHKDINSSNVLLDSDLRAKIANFAMARPAEGQEGEFALTRHIVG 507
+ GL Y+HS +H+D+ SN+LL++ KI +F +AR A+ V
Sbjct: 131 ILRGLKYIHSANV---LHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVA 187
Query: 508 TKGYMAPEYLENGLVSTK-LDVYAFGVLILEMLTGKEAAALHAEENNMHLSDVLNAVL 564
T+ Y APE + N TK +D+++ G ++ EML+ + H D LN +L
Sbjct: 188 TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFP------GKHYLDQLNHIL 239
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 47/170 (27%), Positives = 81/170 (47%), Gaps = 18/170 (10%)
Query: 377 KVNGDVSKEIALLNKINHSNLIILSGVCFNEGNCYLVYEYAVNGTLSDWVFSNKNEGKYL 436
K +V EI+++N+++H+NLI L ++ + LV EY G L D + L
Sbjct: 128 KDKEEVKNEISVMNQLDHANLIQLYDAFESKNDIVLVMEYVDGGELFDRIIDESYNLTEL 187
Query: 437 DWKQRIQIALDVATGLNYLHSFTNPPHVHKDINSSNVL-LDSDLRA-KIANFAMAR---P 491
D I + G+ ++H +H D+ N+L ++ D + KI +F +AR P
Sbjct: 188 D---TILFMKQICEGIRHMHQMYI---LHLDLKPENILCVNRDAKQIKIIDFGLARRYKP 241
Query: 492 AEGQEGEFALTRHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLILEMLTG 541
E + F GT ++APE + VS D+++ GV+ +L+G
Sbjct: 242 REKLKVNF-------GTPEFLAPEVVNYDFVSFPTDMWSVGVIAYMLLSG 284
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 52/96 (54%), Gaps = 4/96 (4%)
Query: 448 VATGLNYLHSFTNPPHVHKDINSSNVLLDSDLRAKIANFAMARPAEGQEGEFALTRHIVG 507
+ GL Y+HS +H+D+ SN+LL++ KI +F +AR A+ V
Sbjct: 133 ILRGLKYIHSANV---LHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVA 189
Query: 508 TKGYMAPEYLENGLVSTK-LDVYAFGVLILEMLTGK 542
T+ Y APE + N TK +D+++ G ++ EML+ +
Sbjct: 190 TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 36/118 (30%), Positives = 58/118 (49%), Gaps = 10/118 (8%)
Query: 448 VATGLNYLHSFTNPPHVHKDINSSNVLLDSDLRAKIANFAMARPAEGQEGEFALTRHIVG 507
+ GL Y+HS +H+D+ SN+LL++ KI +F +AR A+ V
Sbjct: 138 ILRGLKYIHSANV---LHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVA 194
Query: 508 TKGYMAPEYLENGLVSTK-LDVYAFGVLILEMLTGKEAAALHAEENNMHLSDVLNAVL 564
T+ Y APE + N TK +D+++ G ++ EML+ + H D LN +L
Sbjct: 195 TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFP------GKHYLDQLNHIL 246
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 36/118 (30%), Positives = 58/118 (49%), Gaps = 10/118 (8%)
Query: 448 VATGLNYLHSFTNPPHVHKDINSSNVLLDSDLRAKIANFAMARPAEGQEGEFALTRHIVG 507
+ GL Y+HS +H+D+ SN+LL++ KI +F +AR A+ V
Sbjct: 139 ILRGLKYIHSANV---LHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVA 195
Query: 508 TKGYMAPEYLENGLVSTK-LDVYAFGVLILEMLTGKEAAALHAEENNMHLSDVLNAVL 564
T+ Y APE + N TK +D+++ G ++ EML+ + H D LN +L
Sbjct: 196 TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFP------GKHYLDQLNHIL 247
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 36/118 (30%), Positives = 58/118 (49%), Gaps = 10/118 (8%)
Query: 448 VATGLNYLHSFTNPPHVHKDINSSNVLLDSDLRAKIANFAMARPAEGQEGEFALTRHIVG 507
+ GL Y+HS +H+D+ SN+LL++ KI +F +AR A+ V
Sbjct: 130 ILRGLKYIHSANV---LHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVA 186
Query: 508 TKGYMAPEYLENGLVSTK-LDVYAFGVLILEMLTGKEAAALHAEENNMHLSDVLNAVL 564
T+ Y APE + N TK +D+++ G ++ EML+ + H D LN +L
Sbjct: 187 TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFP------GKHYLDQLNHIL 238
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 36/118 (30%), Positives = 58/118 (49%), Gaps = 10/118 (8%)
Query: 448 VATGLNYLHSFTNPPHVHKDINSSNVLLDSDLRAKIANFAMARPAEGQEGEFALTRHIVG 507
+ GL Y+HS +H+D+ SN+LL++ KI +F +AR A+ V
Sbjct: 137 ILRGLKYIHSANV---LHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVA 193
Query: 508 TKGYMAPEYLENGLVSTK-LDVYAFGVLILEMLTGKEAAALHAEENNMHLSDVLNAVL 564
T+ Y APE + N TK +D+++ G ++ EML+ + H D LN +L
Sbjct: 194 TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFP------GKHYLDQLNHIL 245
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 36/118 (30%), Positives = 58/118 (49%), Gaps = 10/118 (8%)
Query: 448 VATGLNYLHSFTNPPHVHKDINSSNVLLDSDLRAKIANFAMARPAEGQEGEFALTRHIVG 507
+ GL Y+HS +H+D+ SN+LL++ KI +F +AR A+ V
Sbjct: 137 ILRGLKYIHSANV---LHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVA 193
Query: 508 TKGYMAPEYLENGLVSTK-LDVYAFGVLILEMLTGKEAAALHAEENNMHLSDVLNAVL 564
T+ Y APE + N TK +D+++ G ++ EML+ + H D LN +L
Sbjct: 194 TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFP------GKHYLDQLNHIL 245
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 52/96 (54%), Gaps = 4/96 (4%)
Query: 448 VATGLNYLHSFTNPPHVHKDINSSNVLLDSDLRAKIANFAMARPAEGQEGEFALTRHIVG 507
+ GL Y+HS +H+D+ SN+LL++ KI +F +AR A+ V
Sbjct: 133 ILRGLKYIHSANV---LHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVA 189
Query: 508 TKGYMAPEYLENGLVSTK-LDVYAFGVLILEMLTGK 542
T+ Y APE + N TK +D+++ G ++ EML+ +
Sbjct: 190 TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 45/181 (24%), Positives = 89/181 (49%), Gaps = 20/181 (11%)
Query: 370 GGFAA--IKKVNGDVSKEIALLNKIN-HSNLIILSGVCFNEGNCYLVYEYAVNGTLSDWV 426
G F+A ++++ KE+ +L K++ H N+I L +LV++ G L D++
Sbjct: 56 GSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYL 115
Query: 427 FSNKNEGKYLDWKQRIQIALDVATGLNYLHSFTNPPHVHKDINSSNVLLDSDLRAKIANF 486
+ K + ++ ++ L+V L+ L+ VH+D+ N+LLD D+ K+ +F
Sbjct: 116 -TEKVTLSEKETRKIMRALLEVICALHKLNI------VHRDLKPENILLDDDMNIKLTDF 168
Query: 487 AMARPAEGQEGEFALTRHIVGTKGYMAPEYLENGL------VSTKLDVYAFGVLILEMLT 540
+ + E R + GT Y+APE +E + ++D+++ GV++ +L
Sbjct: 169 GFSCQLDPGEK----LRSVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLA 224
Query: 541 G 541
G
Sbjct: 225 G 225
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 36/118 (30%), Positives = 58/118 (49%), Gaps = 10/118 (8%)
Query: 448 VATGLNYLHSFTNPPHVHKDINSSNVLLDSDLRAKIANFAMARPAEGQEGEFALTRHIVG 507
+ GL Y+HS +H+D+ SN+LL++ KI +F +AR A+ V
Sbjct: 131 ILRGLKYIHSANV---LHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVA 187
Query: 508 TKGYMAPEYLENGLVSTK-LDVYAFGVLILEMLTGKEAAALHAEENNMHLSDVLNAVL 564
T+ Y APE + N TK +D+++ G ++ EML+ + H D LN +L
Sbjct: 188 TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFP------GKHYLDQLNHIL 239
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 36/118 (30%), Positives = 58/118 (49%), Gaps = 10/118 (8%)
Query: 448 VATGLNYLHSFTNPPHVHKDINSSNVLLDSDLRAKIANFAMARPAEGQEGEFALTRHIVG 507
+ GL Y+HS +H+D+ SN+LL++ KI +F +AR A+ V
Sbjct: 141 ILRGLKYIHSANV---LHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVA 197
Query: 508 TKGYMAPEYLENGLVSTK-LDVYAFGVLILEMLTGKEAAALHAEENNMHLSDVLNAVL 564
T+ Y APE + N TK +D+++ G ++ EML+ + H D LN +L
Sbjct: 198 TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFP------GKHYLDQLNHIL 249
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 36/118 (30%), Positives = 58/118 (49%), Gaps = 10/118 (8%)
Query: 448 VATGLNYLHSFTNPPHVHKDINSSNVLLDSDLRAKIANFAMARPAEGQEGEFALTRHIVG 507
+ GL Y+HS +H+D+ SN+LL++ KI +F +AR A+ V
Sbjct: 133 ILRGLKYIHSANV---LHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVA 189
Query: 508 TKGYMAPEYLENGLVSTK-LDVYAFGVLILEMLTGKEAAALHAEENNMHLSDVLNAVL 564
T+ Y APE + N TK +D+++ G ++ EML+ + H D LN +L
Sbjct: 190 TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFP------GKHYLDQLNHIL 241
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 46/172 (26%), Positives = 82/172 (47%), Gaps = 34/172 (19%)
Query: 384 KEIALLNKINHSNLIILSGVCFNEGNCYLVYEYAVNGTLSDWV-------FSNKNEGKYL 436
+E+ LL + H N+I L V + + TL D+ F + GK +
Sbjct: 73 RELRLLKHMRHENVIGLLDV------------FTPDETLDDFTDFYLVMPFMGTDLGKLM 120
Query: 437 DWKQ----RIQ-IALDVATGLNYLHSFTNPPHVHKDINSSNVLLDSDLRAKIANFAMARP 491
++ RIQ + + GL Y+H+ +H+D+ N+ ++ D KI +F +AR
Sbjct: 121 KHEKLGEDRIQFLVYQMLKGLRYIHAAGI---IHRDLKPGNLAVNEDCELKILDFGLARQ 177
Query: 492 AEGQEGEFALTRHIVGTKGYMAPEYLENGLVSTK-LDVYAFGVLILEMLTGK 542
A+ + +TR Y APE + N + T+ +D+++ G ++ EM+TGK
Sbjct: 178 ADSEMXGXVVTR------WYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGK 223
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 36/118 (30%), Positives = 58/118 (49%), Gaps = 10/118 (8%)
Query: 448 VATGLNYLHSFTNPPHVHKDINSSNVLLDSDLRAKIANFAMARPAEGQEGEFALTRHIVG 507
+ GL Y+HS +H+D+ SN+LL++ KI +F +AR A+ V
Sbjct: 153 ILRGLKYIHSANV---LHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVA 209
Query: 508 TKGYMAPEYLENGLVSTK-LDVYAFGVLILEMLTGKEAAALHAEENNMHLSDVLNAVL 564
T+ Y APE + N TK +D+++ G ++ EML+ + H D LN +L
Sbjct: 210 TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFP------GKHYLDQLNHIL 261
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 36/118 (30%), Positives = 58/118 (49%), Gaps = 10/118 (8%)
Query: 448 VATGLNYLHSFTNPPHVHKDINSSNVLLDSDLRAKIANFAMARPAEGQEGEFALTRHIVG 507
+ GL Y+HS +H+D+ SN+LL++ KI +F +AR A+ V
Sbjct: 137 ILRGLKYIHSANV---LHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVA 193
Query: 508 TKGYMAPEYLENGLVSTK-LDVYAFGVLILEMLTGKEAAALHAEENNMHLSDVLNAVL 564
T+ Y APE + N TK +D+++ G ++ EML+ + H D LN +L
Sbjct: 194 TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFP------GKHYLDQLNHIL 245
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 35/132 (26%), Positives = 65/132 (49%), Gaps = 11/132 (8%)
Query: 411 YLVYEYAVNGTLSDWVFSNKNEGKYLDWKQRIQIALDVATGLNYLHSFTNPPHVHKDINS 470
++V EY G+L+D V +D Q + + L +LHS +H++I S
Sbjct: 94 WVVMEYLAGGSLTDVVTET-----CMDEGQIAAVCRECLQALEFLHSNQ---VIHRNIKS 145
Query: 471 SNVLLDSDLRAKIANFAMARPAEGQEGEFALTRHIVGTKGYMAPEYLENGLVSTKLDVYA 530
N+LL D K+ +F ++ + + +VGT +MAPE + K+D+++
Sbjct: 146 DNILLGMDGSVKLTDFGFCAQITPEQSKRST---MVGTPYWMAPEVVTRKAYGPKVDIWS 202
Query: 531 FGVLILEMLTGK 542
G++ +EM+ G+
Sbjct: 203 LGIMAIEMIEGE 214
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 52/96 (54%), Gaps = 4/96 (4%)
Query: 448 VATGLNYLHSFTNPPHVHKDINSSNVLLDSDLRAKIANFAMARPAEGQEGEFALTRHIVG 507
+ GL Y+HS +H+D+ SN+LL++ KI +F +AR A+ V
Sbjct: 153 ILRGLKYIHSANV---LHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVA 209
Query: 508 TKGYMAPEYLENGLVSTK-LDVYAFGVLILEMLTGK 542
T+ Y APE + N TK +D+++ G ++ EML+ +
Sbjct: 210 TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 245
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 52/96 (54%), Gaps = 4/96 (4%)
Query: 448 VATGLNYLHSFTNPPHVHKDINSSNVLLDSDLRAKIANFAMARPAEGQEGEFALTRHIVG 507
+ GL Y+HS +H+D+ SN+LL++ KI +F +AR A+ V
Sbjct: 133 ILRGLKYIHSANV---LHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVA 189
Query: 508 TKGYMAPEYLENGLVSTK-LDVYAFGVLILEMLTGK 542
T+ Y APE + N TK +D+++ G ++ EML+ +
Sbjct: 190 TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 97/215 (45%), Gaps = 31/215 (14%)
Query: 346 LQSATDNFSFTCRIQGSVY------RGKINGGFAAIKKV----------NGDVSKEIALL 389
Q +D + ++ Y + K+ G AIK + +G + E+A+L
Sbjct: 16 FQGLSDRYQRVKKLGSGAYGEVLLCKDKLTGAERAIKIIKKSSVTTTSNSGALLDEVAVL 75
Query: 390 NKINHSNLIILSGVCFNEGNCYLVYEYAVNGTLSDWVFSNKNEGKYLDWKQRIQIALDVA 449
+++H N++ L ++ N YLV E G L D + + K+ + + I V
Sbjct: 76 KQLDHPNIMKLYEFFEDKRNYYLVMEVYRGGELFDEIILRQ---KFSEVDAAV-IMKQVL 131
Query: 450 TGLNYLHSFTNPPHVHKDINSSNVLLDSDLR---AKIANFAMARPAEGQEGEFALTRHIV 506
+G YLH VH+D+ N+LL+S R KI +F ++ A + G + +
Sbjct: 132 SGTTYLHKHNI---VHRDLKPENLLLESKSRDALIKIVDFGLS--AHFEVG--GKMKERL 184
Query: 507 GTKGYMAPEYLENGLVSTKLDVYAFGVLILEMLTG 541
GT Y+APE L K DV++ GV++ +L G
Sbjct: 185 GTAYYIAPEVLRKK-YDEKCDVWSCGVILYILLCG 218
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 48/207 (23%), Positives = 91/207 (43%), Gaps = 31/207 (14%)
Query: 361 GSVYRGKING-------GFAAIK----KVNGDVSKEI----ALLNKINHSNLIILSGVCF 405
G VY+G + G AIK K G + +E L ++ H N++ L GV
Sbjct: 40 GKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVVCLLGVVT 99
Query: 406 NEGNCYLVYEYAVNGTLSDWVF------------SNKNEGKYLDWKQRIQIALDVATGLN 453
+ +++ Y +G L +++ ++ L+ + + +A G+
Sbjct: 100 KDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGME 159
Query: 454 YLHSFTNPPHVHKDINSSNVLLDSDLRAKIANFAMARPAEGQEGEFALTRHIVGTKGYMA 513
YL S VHKD+ + NVL+ L KI++ + R + L ++ + +MA
Sbjct: 160 YLSSHHV---VHKDLATRNVLVYDKLNVKISDLGLFREVYAADYYKLLGNSLLPIR-WMA 215
Query: 514 PEYLENGLVSTKLDVYAFGVLILEMLT 540
PE + G S D++++GV++ E+ +
Sbjct: 216 PEAIMYGKFSIDSDIWSYGVVLWEVFS 242
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 59/118 (50%), Gaps = 10/118 (8%)
Query: 448 VATGLNYLHSFTNPPHVHKDINSSNVLLDSDLRAKIANFAMARPAEGQEGEFALTRHIVG 507
+ GL Y+HS +H+D+ SN+L+++ KI +F +AR A+ + V
Sbjct: 153 ILRGLKYIHSANV---LHRDLKPSNLLINTTCDLKICDFGLARIADPEHDHTGFLTEXVA 209
Query: 508 TKGYMAPEYLENGLVSTK-LDVYAFGVLILEMLTGKEAAALHAEENNMHLSDVLNAVL 564
T+ Y APE + N TK +D+++ G ++ EML+ + H D LN +L
Sbjct: 210 TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFP------GKHYLDQLNHIL 261
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 46/187 (24%), Positives = 83/187 (44%), Gaps = 22/187 (11%)
Query: 365 RGKINGGFAAIKKV-------NGDVSKEIALLNKINHSNLIILSGVCFNEGNCYLVYEYA 417
+ ++ G A+K + + + EIA+L KI H N++ L + + + YLV +
Sbjct: 29 KQRLTGKLFALKCIKKSPAFRDSSLENEIAVLKKIKHENIVTLEDIYESTTHYYLVMQLV 88
Query: 418 VNGTLSDWVFSNKNEGKYLDWKQRIQIALDVATGLNYLHSFTNPPHVHKDINSSNVLL-- 475
G L D + G Y + K + V + + YLH VH+D+ N+L
Sbjct: 89 SGGELFDRILER---GVYTE-KDASLVIQQVLSAVKYLH---ENGIVHRDLKPENLLYLT 141
Query: 476 -DSDLRAKIANFAMARPAEGQEGEFALTRHIVGTKGYMAPEYLENGLVSTKLDVYAFGVL 534
+ + + I +F +++ + + GT GY+APE L S +D ++ GV+
Sbjct: 142 PEENSKIMITDFGLSKMEQN-----GIMSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVI 196
Query: 535 ILEMLTG 541
+L G
Sbjct: 197 TYILLCG 203
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 41/165 (24%), Positives = 79/165 (47%), Gaps = 20/165 (12%)
Query: 384 KEIALLNKINHSNLIILSGV-----CFNEGNCYLVYEYAVNGTLSDWVFSNKNEGKYLDW 438
+E+ LL + H N+I L V E N + + + L++ V K ++ +
Sbjct: 70 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF 129
Query: 439 KQRIQIALDVATGLNYLHSFTNPPHVHKDINSSNVLLDSDLRAKIANFAMARPAEGQEGE 498
+ + GL Y+HS +H+D+ SN+ ++ D KI +F +AR + +
Sbjct: 130 -----LIYQILRGLKYIHSADI---IHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTG 181
Query: 499 FALTRHIVGTKGYMAPEYLENGL-VSTKLDVYAFGVLILEMLTGK 542
+ V T+ Y APE + N + + +D+++ G ++ E+LTG+
Sbjct: 182 Y------VATRWYRAPEIMLNAMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 52/96 (54%), Gaps = 4/96 (4%)
Query: 448 VATGLNYLHSFTNPPHVHKDINSSNVLLDSDLRAKIANFAMARPAEGQEGEFALTRHIVG 507
+ GL Y+HS +H+D+ SN+LL++ KI +F +AR A+ V
Sbjct: 133 ILRGLKYIHSANV---LHRDLKPSNLLLNTTXDLKIXDFGLARVADPDHDHTGFLTEYVA 189
Query: 508 TKGYMAPEYLENGLVSTK-LDVYAFGVLILEMLTGK 542
T+ Y APE + N TK +D+++ G ++ EML+ +
Sbjct: 190 TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 57/227 (25%), Positives = 98/227 (43%), Gaps = 41/227 (18%)
Query: 342 SFKELQSATDNFSFTCRIQ-----GSVYRGKINGGFAAIKKVNGDVSK------------ 384
F +Q A F+ R Q GS +G + F + +N V K
Sbjct: 7 QFYSVQVADSTFTVLKRYQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAK 66
Query: 385 ----EIALLNKINHSNLIILSGVCFNEG------NCYLVYEYAVNGTLSDWVFSNKNEGK 434
E+ LL +NH N+I L V + + YLV E ++ L +
Sbjct: 67 RAYRELVLLKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMEL-MDANLCQVIHME----- 120
Query: 435 YLDWKQRIQIALDVATGLNYLHSFTNPPHVHKDINSSNVLLDSDLRAKIANFAMARPAEG 494
LD ++ + + G+ +LHS +H+D+ SN+++ SD KI +F +AR A
Sbjct: 121 -LDHERMSYLLYQMLCGIKHLHSAGI---IHRDLKPSNIVVKSDCTLKILDFGLARTAST 176
Query: 495 QEGEFALTRHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLILEMLTG 541
F +T ++V T+ Y APE + +D+++ G ++ E++ G
Sbjct: 177 N---FMMTPYVV-TRYYRAPEVILGMGYKENVDIWSVGCIMGELVKG 219
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 55/245 (22%), Positives = 108/245 (44%), Gaps = 39/245 (15%)
Query: 385 EIALLNKI-NHSNLIILSGVCFNEGNCYLVYEYAVNGTLSDWVFSNKNEG---------- 433
E+ +++ + H N++ L G C + G ++ EY G L +++ + G
Sbjct: 99 ELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKRPPGLEYSYNPSHN 158
Query: 434 --KYLDWKQRIQIALDVATGLNYLHSFTNPPHVHKDINSSNVLLDSDLRAKIANFAMARP 491
+ L + + + VA G+ +L S +H+D+ + NVLL + AKI +F +AR
Sbjct: 159 PEEQLSSRDLLHFSSQVAQGMAFLASKNC---IHRDVAARNVLLTNGHVAKIGDFGLARD 215
Query: 492 AEGQEGEFALTRHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLILEMLTGKEAAALHAEE 551
+ K +MAPE + + + + + DV+++G+L+ E+ + L
Sbjct: 216 IMNDSNYIVKGNARLPVK-WMAPESIFDCVYTVQSDVWSYGILLWEIFS----LGL---- 266
Query: 552 NNMHLSDVLNAVLTK--EDGEESLRHFIDPTLQGNYPLELALLVIRLIDACLKKDPTDRP 609
N + ++N+ K +DG + + P + ++ AC +PT RP
Sbjct: 267 -NPYPGILVNSKFYKLVKDGYQMAQPAFAPK-----------NIYSIMQACWALEPTHRP 314
Query: 610 TMYEI 614
T +I
Sbjct: 315 TFQQI 319
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 44/158 (27%), Positives = 74/158 (46%), Gaps = 15/158 (9%)
Query: 385 EIALLNKINHSNLIILSGVCFNEGNCYLVYEYAVNGTLSDWVFSN-KNEGKYLDWKQRIQ 443
E +L +N L+ L + N Y+V EY G + FS+ + G++ + R
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEM----FSHLRRIGRFSEPHARFY 146
Query: 444 IALDVATGLNYLHSFTNPPHVHKDINSSNVLLDSDLRAKIANFAMARPAEGQEGEFALTR 503
A V T YLHS +++D+ N+L+D ++ +F A+ +G+ T
Sbjct: 147 AAQIVLT-FEYLHSLD---LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR------TW 196
Query: 504 HIVGTKGYMAPEYLENGLVSTKLDVYAFGVLILEMLTG 541
+ GT Y+AP + + + +D +A GVLI EM G
Sbjct: 197 XLCGTPEYLAPAIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 48/207 (23%), Positives = 91/207 (43%), Gaps = 31/207 (14%)
Query: 361 GSVYRGKING-------GFAAIK----KVNGDVSKEI----ALLNKINHSNLIILSGVCF 405
G VY+G + G AIK K G + +E L ++ H N++ L GV
Sbjct: 23 GKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVVCLLGVVT 82
Query: 406 NEGNCYLVYEYAVNGTLSDWVF------------SNKNEGKYLDWKQRIQIALDVATGLN 453
+ +++ Y +G L +++ ++ L+ + + +A G+
Sbjct: 83 KDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGME 142
Query: 454 YLHSFTNPPHVHKDINSSNVLLDSDLRAKIANFAMARPAEGQEGEFALTRHIVGTKGYMA 513
YL S VHKD+ + NVL+ L KI++ + R + L ++ + +MA
Sbjct: 143 YLSSHHV---VHKDLATRNVLVYDKLNVKISDLGLFREVYAADYYKLLGNSLLPIR-WMA 198
Query: 514 PEYLENGLVSTKLDVYAFGVLILEMLT 540
PE + G S D++++GV++ E+ +
Sbjct: 199 PEAIMYGKFSIDSDIWSYGVVLWEVFS 225
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 42/162 (25%), Positives = 75/162 (46%), Gaps = 11/162 (6%)
Query: 382 VSKEIALLNKINHSNLIILSGVCFNEGNCYLVYEYAVNGTLSDWVFSNKNEGKYLDWKQR 441
V E+ + ++ H +++ L + YLV E NG ++ ++ KN K +
Sbjct: 58 VQNEVKIHCQLKHPSILELYNYFEDSNYVYLVLEMCHNGEMNRYL---KNRVKPFSENEA 114
Query: 442 IQIALDVATGLNYLHSFTNPPHVHKDINSSNVLLDSDLRAKIANFAMARPAE-GQEGEFA 500
+ TG+ YLHS +H+D+ SN+LL ++ KIA+F +A + E +
Sbjct: 115 RHFMHQIITGMLYLHSHGI---LHRDLTLSNLLLTRNMNIKIADFGLATQLKMPHEKHYT 171
Query: 501 LTRHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLILEMLTGK 542
L GT Y++PE + DV++ G + +L G+
Sbjct: 172 L----CGTPNYISPEIATRSAHGLESDVWSLGCMFYTLLIGR 209
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 42/164 (25%), Positives = 77/164 (46%), Gaps = 15/164 (9%)
Query: 382 VSKEIALLNKINHSNLIILSGVCFNEGNCYLVYEYAVNGTLSDWVFSNKNEGKYLDWKQR 441
+ +E + + H N++ L EG+ YL+++ G L + + + + + D
Sbjct: 57 LEREARICRLLKHPNIVRLHDSISEEGHHYLIFDLVTGGELFEDIVAREYYSE-ADASHC 115
Query: 442 IQIALDVATGLNYLHSFTNPPHVHKDINSSNVLLDSDLRA---KIANFAMARPAEG-QEG 497
IQ L+ + + VH+++ N+LL S L+ K+A+F +A EG Q+
Sbjct: 116 IQQILEAVLHCHQMGV------VHRNLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQA 169
Query: 498 EFALTRHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLILEMLTG 541
F GT GY++PE L +D++A GV++ +L G
Sbjct: 170 WFGFA----GTPGYLSPEVLRKDPYGKPVDLWACGVILYILLVG 209
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 52/96 (54%), Gaps = 4/96 (4%)
Query: 448 VATGLNYLHSFTNPPHVHKDINSSNVLLDSDLRAKIANFAMARPAEGQEGEFALTRHIVG 507
+ GL Y+HS +H+D+ SN+LL++ KI +F +AR A+ V
Sbjct: 135 ILRGLKYIHSANV---LHRDLKPSNLLLNTTSDLKICDFGLARVADPDHDHTGFLTEYVA 191
Query: 508 TKGYMAPEYLENGLVSTK-LDVYAFGVLILEMLTGK 542
T+ Y APE + N TK +D+++ G ++ EML+ +
Sbjct: 192 TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 227
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 41/165 (24%), Positives = 79/165 (47%), Gaps = 20/165 (12%)
Query: 384 KEIALLNKINHSNLIILSGV-----CFNEGNCYLVYEYAVNGTLSDWVFSNKNEGKYLDW 438
+E+ LL + H N+I L V E N + + + L++ V K ++ +
Sbjct: 70 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKXQKLTDDHVQF 129
Query: 439 KQRIQIALDVATGLNYLHSFTNPPHVHKDINSSNVLLDSDLRAKIANFAMARPAEGQEGE 498
+ + GL Y+HS +H+D+ SN+ ++ D KI +F +AR + +
Sbjct: 130 -----LIYQILRGLKYIHSADI---IHRDLKPSNLAVNEDXELKILDFGLARHTDDEMTG 181
Query: 499 FALTRHIVGTKGYMAPEYLENGL-VSTKLDVYAFGVLILEMLTGK 542
+ V T+ Y APE + N + + +D+++ G ++ E+LTG+
Sbjct: 182 Y------VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3KMU|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Apo)
Length = 271
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 62/276 (22%), Positives = 111/276 (40%), Gaps = 60/276 (21%)
Query: 361 GSVYRGKINGGFAAIK---------KVNGDVSKEIALLNKINHSNLIILSGVCFNEGNCY 411
G +++G+ G +K + + D ++E L +H N++ + G C + +
Sbjct: 24 GELWKGRWQGNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQSPPAPH 83
Query: 412 --LVYEYAVNGTLSDWVFSNKNEGK--YLDWKQRIQIALDVATGLNYLHSFTN--PPHVH 465
L+ + G+L ++ +EG +D Q ++ ALD A G +LH+ P H
Sbjct: 84 PTLITHWXPYGSL----YNVLHEGTNFVVDQSQAVKFALDXARGXAFLHTLEPLIPRHA- 138
Query: 466 KDINSSNVLLDSDLRAKIA----NFAMARPAEGQEGEFALTRHIVGTKGYMAPEYLENGL 521
+NS +V +D D A+I+ F+ P ++APE L+
Sbjct: 139 --LNSRSVXIDEDXTARISXADVKFSFQSPGRXY------------APAWVAPEALQKKP 184
Query: 522 VST---KLDVYAFGVLILEMLTGKEAAALHAEENNMHLSDVLNAVLTKEDGEESLRHFID 578
T D ++F VL+ E++T + +D+ N + + E LR I
Sbjct: 185 EDTNRRSADXWSFAVLLWELVT-----------REVPFADLSNXEIGXKVALEGLRPTIP 233
Query: 579 PTLQGNYPLELALLVIRLIDACLKKDPTDRPTMYEI 614
P + + V +L C +DP RP I
Sbjct: 234 PGISPH--------VSKLXKICXNEDPAKRPKFDXI 261
>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3
Length = 361
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 48/190 (25%), Positives = 84/190 (44%), Gaps = 20/190 (10%)
Query: 361 GSVYRGKINGGFAAIK------KVNGDVSKEIALLNKINHSNLIILSGVCFNEGNCYLVY 414
+ R K+ A+K ++ +V +EI + H N++ V + ++
Sbjct: 36 ARLMRDKLTKELVAVKYIERGAAIDENVQREIINHRSLRHPNIVRFKEVILTPTHLAIIM 95
Query: 415 EYAVNGTLSDWVFSNKNEGKYLDWKQRIQIALDVATGLNYLHSFTNPPHVHKDINSSNVL 474
EYA G L + + N G++ + + R + +G++Y HS H+D+ N L
Sbjct: 96 EYASGGELYERIC---NAGRFSEDEARFFFQ-QLLSGVSYCHSMQI---CHRDLKLENTL 148
Query: 475 LDSD--LRAKIANFAMARPAEGQEGEFALTRHIVGTKGYMAPEYLENGLVSTKL-DVYAF 531
LD R KI +F ++ + + + VGT Y+APE L K+ DV++
Sbjct: 149 LDGSPAPRLKICDFGYSKSSVLH----SQPKSTVGTPAYIAPEVLLRQEYDGKIADVWSC 204
Query: 532 GVLILEMLTG 541
GV + ML G
Sbjct: 205 GVTLYVMLVG 214
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 41/165 (24%), Positives = 79/165 (47%), Gaps = 20/165 (12%)
Query: 384 KEIALLNKINHSNLIILSGV-----CFNEGNCYLVYEYAVNGTLSDWVFSNKNEGKYLDW 438
+E+ LL + H N+I L V E N + + + L++ V K ++ +
Sbjct: 99 RELRLLKHMKHENVIGLLDVFTPATSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF 158
Query: 439 KQRIQIALDVATGLNYLHSFTNPPHVHKDINSSNVLLDSDLRAKIANFAMARPAEGQEGE 498
+ + GL Y+HS +H+D+ SN+ ++ D KI +F +AR + +
Sbjct: 159 -----LIYQILRGLKYIHSADI---IHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTG 210
Query: 499 FALTRHIVGTKGYMAPEYLENGL-VSTKLDVYAFGVLILEMLTGK 542
+ V T+ Y APE + N + + +D+++ G ++ E+LTG+
Sbjct: 211 Y------VATRWYRAPEIMLNWMHYNMTVDIWSVGCIMAELLTGR 249
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 41/165 (24%), Positives = 79/165 (47%), Gaps = 20/165 (12%)
Query: 384 KEIALLNKINHSNLIILSGV-----CFNEGNCYLVYEYAVNGTLSDWVFSNKNEGKYLDW 438
+E+ LL + H N+I L V E N + + + L++ V K ++ +
Sbjct: 70 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF 129
Query: 439 KQRIQIALDVATGLNYLHSFTNPPHVHKDINSSNVLLDSDLRAKIANFAMARPAEGQEGE 498
+ + GL Y+HS +H+D+ SN+ ++ D KI +F +AR + +
Sbjct: 130 -----LIYQILRGLKYIHSADI---IHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTG 181
Query: 499 FALTRHIVGTKGYMAPEYLENGL-VSTKLDVYAFGVLILEMLTGK 542
+ V T+ Y APE + N + + +D+++ G ++ E+LTG+
Sbjct: 182 Y------VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 46/190 (24%), Positives = 89/190 (46%), Gaps = 11/190 (5%)
Query: 354 SFTCRIQGSVYRGKINGGFAAIKKVNGDVSKEIALLNKINHSNLIILSGVCFNEGNCYLV 413
++ R++ V K++ F ++ +E+ LL + H N+I L V +
Sbjct: 47 AYDARLRQKVAVKKLSRPFQSLIHAR-RTYRELRLLKHLKHENVIGLLDVFTPATSIEDF 105
Query: 414 YEYAVNGTLSDWVFSNKNEGKYLDWKQRIQIALDVATGLNYLHSFTNPPHVHKDINSSNV 473
E + TL +N + + L + + + GL Y+HS +H+D+ SNV
Sbjct: 106 SEVYLVTTLMGADLNNIVKSQALSDEHVQFLVYQLLRGLKYIHSAGI---IHRDLKPSNV 162
Query: 474 LLDSDLRAKIANFAMARPAEGQEGEFALTRHIVGTKGYMAPEYLENGL-VSTKLDVYAFG 532
++ D +I +F +AR A+ + + V T+ Y APE + N + + +D+++ G
Sbjct: 163 AVNEDSELRILDFGLARQADEEMTGY------VATRWYRAPEIMLNWMHYNQTVDIWSVG 216
Query: 533 VLILEMLTGK 542
++ E+L GK
Sbjct: 217 CIMAELLQGK 226
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 51/167 (30%), Positives = 78/167 (46%), Gaps = 18/167 (10%)
Query: 381 DVSKEIALLNKINHSNLIILSGVCFNEGNCYLVYEYAVNGTLSDWVFSNKNEGKYLDWKQ 440
+V EI +L K+NH +I + F+ + Y+V E G L D V NK +
Sbjct: 67 NVETEIEILKKLNHPCIIKIKNF-FDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLY 125
Query: 441 RIQIALDVATGLNYLHSFTNPPHVHKDINSSNVLLDS---DLRAKIANFAMARPAEGQEG 497
Q+ L V YLH +H+D+ NVLL S D KI +F ++ G
Sbjct: 126 FYQMLLAV----QYLHENGI---IHRDLKPENVLLSSQEEDCLIKITDFGHSKIL----G 174
Query: 498 EFALTRHIVGTKGYMAPEYLEN---GLVSTKLDVYAFGVLILEMLTG 541
E +L R + GT Y+APE L + + +D ++ GV++ L+G
Sbjct: 175 ETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSG 221
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 41/165 (24%), Positives = 79/165 (47%), Gaps = 20/165 (12%)
Query: 384 KEIALLNKINHSNLIILSGV-----CFNEGNCYLVYEYAVNGTLSDWVFSNKNEGKYLDW 438
+E+ LL + H N+I L V E N + + + L++ V K ++ +
Sbjct: 70 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKXQKLTDDHVQF 129
Query: 439 KQRIQIALDVATGLNYLHSFTNPPHVHKDINSSNVLLDSDLRAKIANFAMARPAEGQEGE 498
+ + GL Y+HS +H+D+ SN+ ++ D KI +F +AR + +
Sbjct: 130 -----LIYQILRGLKYIHSADI---IHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTG 181
Query: 499 FALTRHIVGTKGYMAPEYLENGL-VSTKLDVYAFGVLILEMLTGK 542
+ V T+ Y APE + N + + +D+++ G ++ E+LTG+
Sbjct: 182 Y------VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 41/165 (24%), Positives = 79/165 (47%), Gaps = 20/165 (12%)
Query: 384 KEIALLNKINHSNLIILSGV-----CFNEGNCYLVYEYAVNGTLSDWVFSNKNEGKYLDW 438
+E+ LL + H N+I L V E N + + + L++ V K ++ +
Sbjct: 75 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF 134
Query: 439 KQRIQIALDVATGLNYLHSFTNPPHVHKDINSSNVLLDSDLRAKIANFAMARPAEGQEGE 498
+ + GL Y+HS +H+D+ SN+ ++ D KI +F +AR + +
Sbjct: 135 -----LIYQILRGLKYIHSADI---IHRDLKPSNLAVNEDXELKILDFGLARHTDDEMTG 186
Query: 499 FALTRHIVGTKGYMAPEYLENGL-VSTKLDVYAFGVLILEMLTGK 542
+ V T+ Y APE + N + + +D+++ G ++ E+LTG+
Sbjct: 187 Y------VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 225
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 41/165 (24%), Positives = 79/165 (47%), Gaps = 20/165 (12%)
Query: 384 KEIALLNKINHSNLIILSGV-----CFNEGNCYLVYEYAVNGTLSDWVFSNKNEGKYLDW 438
+E+ LL + H N+I L V E N + + + L++ V K ++ +
Sbjct: 75 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF 134
Query: 439 KQRIQIALDVATGLNYLHSFTNPPHVHKDINSSNVLLDSDLRAKIANFAMARPAEGQEGE 498
+ + GL Y+HS +H+D+ SN+ ++ D KI +F +AR + +
Sbjct: 135 -----LIYQILRGLKYIHSADI---IHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTG 186
Query: 499 FALTRHIVGTKGYMAPEYLENGL-VSTKLDVYAFGVLILEMLTGK 542
+ V T+ Y APE + N + + +D+++ G ++ E+LTG+
Sbjct: 187 Y------VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 225
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 46/195 (23%), Positives = 89/195 (45%), Gaps = 21/195 (10%)
Query: 354 SFTCRIQGSVYRGKINGGFAAIKKVNGDVSKEIALLNKINHSNLIILSGV-----CFNEG 408
+F + V K++ F +I +E+ LL + H N+I L V E
Sbjct: 41 AFDTKTGHRVAVKKLSRPFQSIIHAKR-TYRELRLLKHMKHENVIGLLDVFTPARSLEEF 99
Query: 409 NCYLVYEYAVNGTLSDWVFSNKNEGKYLDWKQRIQIALDVATGLNYLHSFTNPPHVHKDI 468
N + + + L++ V K ++ + + + GL Y+HS +H+D+
Sbjct: 100 NDVYLVTHLMGADLNNIVKCQKLTDDHVQF-----LIYQILRGLKYIHSADI---IHRDL 151
Query: 469 NSSNVLLDSDLRAKIANFAMARPAEGQEGEFALTRHIVGTKGYMAPEYLENGL-VSTKLD 527
SN+ ++ D KI +F +AR + + + V T+ Y APE + N + + +D
Sbjct: 152 KPSNLAVNEDCELKILDFGLARHTDDEMTGY------VATRWYRAPEIMLNWMHYNQTVD 205
Query: 528 VYAFGVLILEMLTGK 542
+++ G ++ E+LTG+
Sbjct: 206 IWSVGCIMAELLTGR 220
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 41/165 (24%), Positives = 79/165 (47%), Gaps = 20/165 (12%)
Query: 384 KEIALLNKINHSNLIILSGV-----CFNEGNCYLVYEYAVNGTLSDWVFSNKNEGKYLDW 438
+E+ LL + H N+I L V E N + + + L++ V K ++ +
Sbjct: 69 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF 128
Query: 439 KQRIQIALDVATGLNYLHSFTNPPHVHKDINSSNVLLDSDLRAKIANFAMARPAEGQEGE 498
+ + GL Y+HS +H+D+ SN+ ++ D KI +F +AR + +
Sbjct: 129 -----LIYQILRGLKYIHSADI---IHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTG 180
Query: 499 FALTRHIVGTKGYMAPEYLENGL-VSTKLDVYAFGVLILEMLTGK 542
+ V T+ Y APE + N + + +D+++ G ++ E+LTG+
Sbjct: 181 Y------VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 219
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 41/165 (24%), Positives = 79/165 (47%), Gaps = 20/165 (12%)
Query: 384 KEIALLNKINHSNLIILSGV-----CFNEGNCYLVYEYAVNGTLSDWVFSNKNEGKYLDW 438
+E+ LL + H N+I L V E N + + + L++ V K ++ +
Sbjct: 70 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF 129
Query: 439 KQRIQIALDVATGLNYLHSFTNPPHVHKDINSSNVLLDSDLRAKIANFAMARPAEGQEGE 498
+ + GL Y+HS +H+D+ SN+ ++ D KI +F +AR + +
Sbjct: 130 -----LIYQILRGLKYIHSADI---IHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTG 181
Query: 499 FALTRHIVGTKGYMAPEYLENGL-VSTKLDVYAFGVLILEMLTGK 542
+ V T+ Y APE + N + + +D+++ G ++ E+LTG+
Sbjct: 182 Y------VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 41/165 (24%), Positives = 79/165 (47%), Gaps = 20/165 (12%)
Query: 384 KEIALLNKINHSNLIILSGV-----CFNEGNCYLVYEYAVNGTLSDWVFSNKNEGKYLDW 438
+E+ LL + H N+I L V E N + + + L++ V K ++ +
Sbjct: 75 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF 134
Query: 439 KQRIQIALDVATGLNYLHSFTNPPHVHKDINSSNVLLDSDLRAKIANFAMARPAEGQEGE 498
+ + GL Y+HS +H+D+ SN+ ++ D KI +F +AR + +
Sbjct: 135 -----LIYQILRGLKYIHSADI---IHRDLKPSNLAVNEDXELKILDFGLARHTDDEMTG 186
Query: 499 FALTRHIVGTKGYMAPEYLENGL-VSTKLDVYAFGVLILEMLTGK 542
+ V T+ Y APE + N + + +D+++ G ++ E+LTG+
Sbjct: 187 Y------VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 225
>pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6
pdb|3UDB|B Chain B, Crystal Structure Of Snrk2.6
pdb|3UDB|C Chain C, Crystal Structure Of Snrk2.6
pdb|3UDB|D Chain D, Crystal Structure Of Snrk2.6
pdb|3UDB|E Chain E, Crystal Structure Of Snrk2.6
pdb|3UDB|F Chain F, Crystal Structure Of Snrk2.6
Length = 317
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 80/169 (47%), Gaps = 14/169 (8%)
Query: 376 KKVNGDVSKEIALLNKINHSNLIILSGVCFNEGNCYLVYEYAVNGTLSDWVFSNKNEGKY 435
+K++ +V +EI + H N++ V + +V EYA G L + + N G++
Sbjct: 56 EKIDENVKREIINHRSLRHPNIVRFKEVILTPTHLAIVMEYASGGELFERIC---NAGRF 112
Query: 436 LDWKQRIQIALDVATGLNYLHSFTNPPHVHKDINSSNVLLDSD--LRAKIANFAMARPAE 493
+ + R + +G++Y H+ H+D+ N LLD R KIA+F ++ +
Sbjct: 113 SEDEARF-FFQQLISGVSYAHAMQV---AHRDLKLENTLLDGSPAPRLKIADFGYSKASV 168
Query: 494 GQEGEFALTRHIVGTKGYMAPEYLENGLVSTKL-DVYAFGVLILEMLTG 541
+ + VGT Y+APE L K+ DV++ GV + ML G
Sbjct: 169 LH----SQPKSAVGTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVG 213
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 41/165 (24%), Positives = 79/165 (47%), Gaps = 20/165 (12%)
Query: 384 KEIALLNKINHSNLIILSGV-----CFNEGNCYLVYEYAVNGTLSDWVFSNKNEGKYLDW 438
+E+ LL + H N+I L V E N + + + L++ V K ++ +
Sbjct: 70 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF 129
Query: 439 KQRIQIALDVATGLNYLHSFTNPPHVHKDINSSNVLLDSDLRAKIANFAMARPAEGQEGE 498
+ + GL Y+HS +H+D+ SN+ ++ D KI +F +AR + +
Sbjct: 130 -----LIYQILRGLKYIHSADI---IHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTG 181
Query: 499 FALTRHIVGTKGYMAPEYLENGL-VSTKLDVYAFGVLILEMLTGK 542
+ V T+ Y APE + N + + +D+++ G ++ E+LTG+
Sbjct: 182 Y------VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 46/190 (24%), Positives = 89/190 (46%), Gaps = 11/190 (5%)
Query: 354 SFTCRIQGSVYRGKINGGFAAIKKVNGDVSKEIALLNKINHSNLIILSGVCFNEGNCYLV 413
++ R++ V K++ F ++ +E+ LL + H N+I L V +
Sbjct: 39 AYDARLRQKVAVKKLSRPFQSLIHARR-TYRELRLLKHLKHENVIGLLDVFTPATSIEDF 97
Query: 414 YEYAVNGTLSDWVFSNKNEGKYLDWKQRIQIALDVATGLNYLHSFTNPPHVHKDINSSNV 473
E + TL +N + + L + + + GL Y+HS +H+D+ SNV
Sbjct: 98 SEVYLVTTLMGADLNNIVKCQALSDEHVQFLVYQLLRGLKYIHSAGI---IHRDLKPSNV 154
Query: 474 LLDSDLRAKIANFAMARPAEGQEGEFALTRHIVGTKGYMAPEYLENGL-VSTKLDVYAFG 532
++ D +I +F +AR A+ + + V T+ Y APE + N + + +D+++ G
Sbjct: 155 AVNEDCELRILDFGLARQADEEMTGY------VATRWYRAPEIMLNWMHYNQTVDIWSVG 208
Query: 533 VLILEMLTGK 542
++ E+L GK
Sbjct: 209 CIMAELLQGK 218
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 41/165 (24%), Positives = 79/165 (47%), Gaps = 20/165 (12%)
Query: 384 KEIALLNKINHSNLIILSGV-----CFNEGNCYLVYEYAVNGTLSDWVFSNKNEGKYLDW 438
+E+ LL + H N+I L V E N + + + L++ V K ++ +
Sbjct: 72 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF 131
Query: 439 KQRIQIALDVATGLNYLHSFTNPPHVHKDINSSNVLLDSDLRAKIANFAMARPAEGQEGE 498
+ + GL Y+HS +H+D+ SN+ ++ D KI +F +AR + +
Sbjct: 132 -----LIYQILRGLKYIHSADI---IHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTG 183
Query: 499 FALTRHIVGTKGYMAPEYLENGL-VSTKLDVYAFGVLILEMLTGK 542
+ V T+ Y APE + N + + +D+++ G ++ E+LTG+
Sbjct: 184 Y------VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 222
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 41/165 (24%), Positives = 79/165 (47%), Gaps = 20/165 (12%)
Query: 384 KEIALLNKINHSNLIILSGV-----CFNEGNCYLVYEYAVNGTLSDWVFSNKNEGKYLDW 438
+E+ LL + H N+I L V E N + + + L++ V K ++ +
Sbjct: 70 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF 129
Query: 439 KQRIQIALDVATGLNYLHSFTNPPHVHKDINSSNVLLDSDLRAKIANFAMARPAEGQEGE 498
+ + GL Y+HS +H+D+ SN+ ++ D KI +F +AR + +
Sbjct: 130 -----LIYQILRGLKYIHSADI---IHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTG 181
Query: 499 FALTRHIVGTKGYMAPEYLENGL-VSTKLDVYAFGVLILEMLTGK 542
+ V T+ Y APE + N + + +D+++ G ++ E+LTG+
Sbjct: 182 Y------VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 51/190 (26%), Positives = 92/190 (48%), Gaps = 28/190 (14%)
Query: 367 KINGGFAAIKKVNGDVS---------KEIALLNKINHSNLIILSGVCFNEGNCYLVYEYA 417
K +G AIKK++ +E+ LL + H N+I L V + Y++
Sbjct: 46 KRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFYDFY 105
Query: 418 VNGTLSDWVFSNKNEGKYLDWK---QRIQ-IALDVATGLNYLHSFTNPPHVHKDINSSNV 473
+ F + K + K ++IQ + + GL Y+HS VH+D+ N+
Sbjct: 106 LVMP-----FMQTDLQKIMGLKFSEEKIQYLVYQMLKGLKYIHSAGV---VHRDLKPGNL 157
Query: 474 LLDSDLRAKIANFAMARPAEGQEGEFALTRHIVGTKGYMAPEYLENGL-VSTKLDVYAFG 532
++ D KI +F +AR A+ + +T ++V T+ Y APE + + + + +D+++ G
Sbjct: 158 AVNEDCELKILDFGLARHADAE-----MTGYVV-TRWYRAPEVILSWMHYNQTVDIWSVG 211
Query: 533 VLILEMLTGK 542
++ EMLTGK
Sbjct: 212 CIMAEMLTGK 221
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 41/165 (24%), Positives = 79/165 (47%), Gaps = 20/165 (12%)
Query: 384 KEIALLNKINHSNLIILSGV-----CFNEGNCYLVYEYAVNGTLSDWVFSNKNEGKYLDW 438
+E+ LL + H N+I L V E N + + + L++ V K ++ +
Sbjct: 70 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF 129
Query: 439 KQRIQIALDVATGLNYLHSFTNPPHVHKDINSSNVLLDSDLRAKIANFAMARPAEGQEGE 498
+ + GL Y+HS +H+D+ SN+ ++ D KI +F +AR + +
Sbjct: 130 -----LIYQILRGLKYIHSADI---IHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTG 181
Query: 499 FALTRHIVGTKGYMAPEYLENGL-VSTKLDVYAFGVLILEMLTGK 542
+ V T+ Y APE + N + + +D+++ G ++ E+LTG+
Sbjct: 182 Y------VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 41/165 (24%), Positives = 79/165 (47%), Gaps = 20/165 (12%)
Query: 384 KEIALLNKINHSNLIILSGV-----CFNEGNCYLVYEYAVNGTLSDWVFSNKNEGKYLDW 438
+E+ LL + H N+I L V E N + + + L++ V K ++ +
Sbjct: 89 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF 148
Query: 439 KQRIQIALDVATGLNYLHSFTNPPHVHKDINSSNVLLDSDLRAKIANFAMARPAEGQEGE 498
+ + GL Y+HS +H+D+ SN+ ++ D KI +F +AR + +
Sbjct: 149 -----LIYQILRGLKYIHSADI---IHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTG 200
Query: 499 FALTRHIVGTKGYMAPEYLENGL-VSTKLDVYAFGVLILEMLTGK 542
+ V T+ Y APE + N + + +D+++ G ++ E+LTG+
Sbjct: 201 Y------VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 239
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 41/165 (24%), Positives = 79/165 (47%), Gaps = 20/165 (12%)
Query: 384 KEIALLNKINHSNLIILSGV-----CFNEGNCYLVYEYAVNGTLSDWVFSNKNEGKYLDW 438
+E+ LL + H N+I L V E N + + + L++ V K ++ +
Sbjct: 76 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF 135
Query: 439 KQRIQIALDVATGLNYLHSFTNPPHVHKDINSSNVLLDSDLRAKIANFAMARPAEGQEGE 498
+ + GL Y+HS +H+D+ SN+ ++ D KI +F +AR + +
Sbjct: 136 -----LIYQILRGLKYIHSADI---IHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTG 187
Query: 499 FALTRHIVGTKGYMAPEYLENGL-VSTKLDVYAFGVLILEMLTGK 542
+ V T+ Y APE + N + + +D+++ G ++ E+LTG+
Sbjct: 188 Y------VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 226
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 46/195 (23%), Positives = 89/195 (45%), Gaps = 21/195 (10%)
Query: 354 SFTCRIQGSVYRGKINGGFAAIKKVNGDVSKEIALLNKINHSNLIILSGV-----CFNEG 408
+F + V K++ F +I +E+ LL + H N+I L V E
Sbjct: 51 AFDTKTGHRVAVKKLSRPFQSIIHAKR-TYRELRLLKHMKHENVIGLLDVFTPARSLEEF 109
Query: 409 NCYLVYEYAVNGTLSDWVFSNKNEGKYLDWKQRIQIALDVATGLNYLHSFTNPPHVHKDI 468
N + + + L++ V K ++ + + + GL Y+HS +H+D+
Sbjct: 110 NDVYLVTHLMGADLNNIVKCQKLTDDHVQF-----LIYQILRGLKYIHSADI---IHRDL 161
Query: 469 NSSNVLLDSDLRAKIANFAMARPAEGQEGEFALTRHIVGTKGYMAPEYLENGL-VSTKLD 527
SN+ ++ D KI +F +AR + + + V T+ Y APE + N + + +D
Sbjct: 162 KPSNLAVNEDCELKILDFGLARHTDDEMTGY------VATRWYRAPEIMLNWMHYNQTVD 215
Query: 528 VYAFGVLILEMLTGK 542
+++ G ++ E+LTG+
Sbjct: 216 IWSVGCIMAELLTGR 230
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 41/165 (24%), Positives = 79/165 (47%), Gaps = 20/165 (12%)
Query: 384 KEIALLNKINHSNLIILSGV-----CFNEGNCYLVYEYAVNGTLSDWVFSNKNEGKYLDW 438
+E+ LL + H N+I L V E N + + + L++ V K ++ +
Sbjct: 72 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF 131
Query: 439 KQRIQIALDVATGLNYLHSFTNPPHVHKDINSSNVLLDSDLRAKIANFAMARPAEGQEGE 498
+ + GL Y+HS +H+D+ SN+ ++ D KI +F +AR + +
Sbjct: 132 -----LIYQILRGLKYIHSADI---IHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTG 183
Query: 499 FALTRHIVGTKGYMAPEYLENGL-VSTKLDVYAFGVLILEMLTGK 542
+ V T+ Y APE + N + + +D+++ G ++ E+LTG+
Sbjct: 184 Y------VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 222
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/165 (24%), Positives = 79/165 (47%), Gaps = 20/165 (12%)
Query: 384 KEIALLNKINHSNLIILSGV-----CFNEGNCYLVYEYAVNGTLSDWVFSNKNEGKYLDW 438
+E+ LL + H N+I L V E N + + + L++ V K ++ +
Sbjct: 75 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF 134
Query: 439 KQRIQIALDVATGLNYLHSFTNPPHVHKDINSSNVLLDSDLRAKIANFAMARPAEGQEGE 498
+ + GL Y+HS +H+D+ SN+ ++ D KI +F +AR + +
Sbjct: 135 -----LIYQILRGLKYIHSADI---IHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTG 186
Query: 499 FALTRHIVGTKGYMAPEYLENGL-VSTKLDVYAFGVLILEMLTGK 542
+ V T+ Y APE + N + + +D+++ G ++ E+LTG+
Sbjct: 187 Y------VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 225
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/165 (24%), Positives = 79/165 (47%), Gaps = 20/165 (12%)
Query: 384 KEIALLNKINHSNLIILSGV-----CFNEGNCYLVYEYAVNGTLSDWVFSNKNEGKYLDW 438
+E+ LL + H N+I L V E N + + + L++ V K ++ +
Sbjct: 70 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF 129
Query: 439 KQRIQIALDVATGLNYLHSFTNPPHVHKDINSSNVLLDSDLRAKIANFAMARPAEGQEGE 498
+ + GL Y+HS +H+D+ SN+ ++ D KI +F +AR + +
Sbjct: 130 -----LIYQILRGLKYIHSADI---IHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTG 181
Query: 499 FALTRHIVGTKGYMAPEYLENGL-VSTKLDVYAFGVLILEMLTGK 542
+ V T+ Y APE + N + + +D+++ G ++ E+LTG+
Sbjct: 182 Y------VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/165 (24%), Positives = 79/165 (47%), Gaps = 20/165 (12%)
Query: 384 KEIALLNKINHSNLIILSGV-----CFNEGNCYLVYEYAVNGTLSDWVFSNKNEGKYLDW 438
+E+ LL + H N+I L V E N + + + L++ V K ++ +
Sbjct: 77 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF 136
Query: 439 KQRIQIALDVATGLNYLHSFTNPPHVHKDINSSNVLLDSDLRAKIANFAMARPAEGQEGE 498
+ + GL Y+HS +H+D+ SN+ ++ D KI +F +AR + +
Sbjct: 137 -----LIYQILRGLKYIHSADI---IHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTG 188
Query: 499 FALTRHIVGTKGYMAPEYLENGL-VSTKLDVYAFGVLILEMLTGK 542
+ V T+ Y APE + N + + +D+++ G ++ E+LTG+
Sbjct: 189 Y------VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/167 (30%), Positives = 78/167 (46%), Gaps = 18/167 (10%)
Query: 381 DVSKEIALLNKINHSNLIILSGVCFNEGNCYLVYEYAVNGTLSDWVFSNKNEGKYLDWKQ 440
+V EI +L K+NH +I + F+ + Y+V E G L D V NK +
Sbjct: 61 NVETEIEILKKLNHPCIIKIKNF-FDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLY 119
Query: 441 RIQIALDVATGLNYLHSFTNPPHVHKDINSSNVLLDS---DLRAKIANFAMARPAEGQEG 497
Q+ L V YLH +H+D+ NVLL S D KI +F ++ G
Sbjct: 120 FYQMLLAV----QYLHENGI---IHRDLKPENVLLSSQEEDCLIKITDFGHSKIL----G 168
Query: 498 EFALTRHIVGTKGYMAPEYLEN---GLVSTKLDVYAFGVLILEMLTG 541
E +L R + GT Y+APE L + + +D ++ GV++ L+G
Sbjct: 169 ETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSG 215
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/165 (24%), Positives = 79/165 (47%), Gaps = 20/165 (12%)
Query: 384 KEIALLNKINHSNLIILSGV-----CFNEGNCYLVYEYAVNGTLSDWVFSNKNEGKYLDW 438
+E+ LL + H N+I L V E N + + + L++ V K ++ +
Sbjct: 68 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF 127
Query: 439 KQRIQIALDVATGLNYLHSFTNPPHVHKDINSSNVLLDSDLRAKIANFAMARPAEGQEGE 498
+ + GL Y+HS +H+D+ SN+ ++ D KI +F +AR + +
Sbjct: 128 -----LIYQILRGLKYIHSADI---IHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTG 179
Query: 499 FALTRHIVGTKGYMAPEYLENGL-VSTKLDVYAFGVLILEMLTGK 542
+ V T+ Y APE + N + + +D+++ G ++ E+LTG+
Sbjct: 180 Y------VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 218
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/165 (24%), Positives = 79/165 (47%), Gaps = 20/165 (12%)
Query: 384 KEIALLNKINHSNLIILSGV-----CFNEGNCYLVYEYAVNGTLSDWVFSNKNEGKYLDW 438
+E+ LL + H N+I L V E N + + + L++ V K ++ +
Sbjct: 66 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF 125
Query: 439 KQRIQIALDVATGLNYLHSFTNPPHVHKDINSSNVLLDSDLRAKIANFAMARPAEGQEGE 498
+ + GL Y+HS +H+D+ SN+ ++ D KI +F +AR + +
Sbjct: 126 -----LIYQILRGLKYIHSADI---IHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTG 177
Query: 499 FALTRHIVGTKGYMAPEYLENGL-VSTKLDVYAFGVLILEMLTGK 542
+ V T+ Y APE + N + + +D+++ G ++ E+LTG+
Sbjct: 178 Y------VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/165 (24%), Positives = 79/165 (47%), Gaps = 20/165 (12%)
Query: 384 KEIALLNKINHSNLIILSGV-----CFNEGNCYLVYEYAVNGTLSDWVFSNKNEGKYLDW 438
+E+ LL + H N+I L V E N + + + L++ V K ++ +
Sbjct: 72 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF 131
Query: 439 KQRIQIALDVATGLNYLHSFTNPPHVHKDINSSNVLLDSDLRAKIANFAMARPAEGQEGE 498
+ + GL Y+HS +H+D+ SN+ ++ D KI +F +AR + +
Sbjct: 132 -----LIYQILRGLKYIHSADI---IHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTG 183
Query: 499 FALTRHIVGTKGYMAPEYLENGL-VSTKLDVYAFGVLILEMLTGK 542
+ V T+ Y APE + N + + +D+++ G ++ E+LTG+
Sbjct: 184 Y------VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 222
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/167 (30%), Positives = 78/167 (46%), Gaps = 18/167 (10%)
Query: 381 DVSKEIALLNKINHSNLIILSGVCFNEGNCYLVYEYAVNGTLSDWVFSNKNEGKYLDWKQ 440
+V EI +L K+NH +I + F+ + Y+V E G L D V NK +
Sbjct: 61 NVETEIEILKKLNHPCIIKIKNF-FDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLY 119
Query: 441 RIQIALDVATGLNYLHSFTNPPHVHKDINSSNVLLDS---DLRAKIANFAMARPAEGQEG 497
Q+ L V YLH +H+D+ NVLL S D KI +F ++ G
Sbjct: 120 FYQMLLAV----QYLHENGI---IHRDLKPENVLLSSQEEDCLIKITDFGHSKIL----G 168
Query: 498 EFALTRHIVGTKGYMAPEYLEN---GLVSTKLDVYAFGVLILEMLTG 541
E +L R + GT Y+APE L + + +D ++ GV++ L+G
Sbjct: 169 ETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSG 215
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/165 (24%), Positives = 79/165 (47%), Gaps = 20/165 (12%)
Query: 384 KEIALLNKINHSNLIILSGV-----CFNEGNCYLVYEYAVNGTLSDWVFSNKNEGKYLDW 438
+E+ LL + H N+I L V E N + + + L++ V K ++ +
Sbjct: 70 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF 129
Query: 439 KQRIQIALDVATGLNYLHSFTNPPHVHKDINSSNVLLDSDLRAKIANFAMARPAEGQEGE 498
+ + GL Y+HS +H+D+ SN+ ++ D KI +F +AR + +
Sbjct: 130 -----LIYQILRGLKYIHSADI---IHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTG 181
Query: 499 FALTRHIVGTKGYMAPEYLENGL-VSTKLDVYAFGVLILEMLTGK 542
+ V T+ Y APE + N + + +D+++ G ++ E+LTG+
Sbjct: 182 Y------VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/167 (30%), Positives = 78/167 (46%), Gaps = 18/167 (10%)
Query: 381 DVSKEIALLNKINHSNLIILSGVCFNEGNCYLVYEYAVNGTLSDWVFSNKNEGKYLDWKQ 440
+V EI +L K+NH +I + F+ + Y+V E G L D V NK +
Sbjct: 61 NVETEIEILKKLNHPCIIKIKNF-FDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLY 119
Query: 441 RIQIALDVATGLNYLHSFTNPPHVHKDINSSNVLLDS---DLRAKIANFAMARPAEGQEG 497
Q+ L V YLH +H+D+ NVLL S D KI +F ++ G
Sbjct: 120 FYQMLLAV----QYLHENGI---IHRDLKPENVLLSSQEEDCLIKITDFGHSKIL----G 168
Query: 498 EFALTRHIVGTKGYMAPEYLEN---GLVSTKLDVYAFGVLILEMLTG 541
E +L R + GT Y+APE L + + +D ++ GV++ L+G
Sbjct: 169 ETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSG 215
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/165 (24%), Positives = 79/165 (47%), Gaps = 20/165 (12%)
Query: 384 KEIALLNKINHSNLIILSGV-----CFNEGNCYLVYEYAVNGTLSDWVFSNKNEGKYLDW 438
+E+ LL + H N+I L V E N + + + L++ V K ++ +
Sbjct: 93 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF 152
Query: 439 KQRIQIALDVATGLNYLHSFTNPPHVHKDINSSNVLLDSDLRAKIANFAMARPAEGQEGE 498
+ + GL Y+HS +H+D+ SN+ ++ D KI +F +AR + +
Sbjct: 153 -----LIYQILRGLKYIHSADI---IHRDLKPSNLAVNEDCELKILDFGLARHTDDEMXG 204
Query: 499 FALTRHIVGTKGYMAPEYLENGL-VSTKLDVYAFGVLILEMLTGK 542
+ V T+ Y APE + N + + +D+++ G ++ E+LTG+
Sbjct: 205 Y------VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 243
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/167 (30%), Positives = 78/167 (46%), Gaps = 18/167 (10%)
Query: 381 DVSKEIALLNKINHSNLIILSGVCFNEGNCYLVYEYAVNGTLSDWVFSNKNEGKYLDWKQ 440
+V EI +L K+NH +I + F+ + Y+V E G L D V NK +
Sbjct: 60 NVETEIEILKKLNHPCIIKIKNF-FDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLY 118
Query: 441 RIQIALDVATGLNYLHSFTNPPHVHKDINSSNVLLDS---DLRAKIANFAMARPAEGQEG 497
Q+ L V YLH +H+D+ NVLL S D KI +F ++ G
Sbjct: 119 FYQMLLAV----QYLHENGI---IHRDLKPENVLLSSQEEDCLIKITDFGHSKIL----G 167
Query: 498 EFALTRHIVGTKGYMAPEYLEN---GLVSTKLDVYAFGVLILEMLTG 541
E +L R + GT Y+APE L + + +D ++ GV++ L+G
Sbjct: 168 ETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSG 214
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/165 (24%), Positives = 79/165 (47%), Gaps = 20/165 (12%)
Query: 384 KEIALLNKINHSNLIILSGV-----CFNEGNCYLVYEYAVNGTLSDWVFSNKNEGKYLDW 438
+E+ LL + H N+I L V E N + + + L++ V K ++ +
Sbjct: 90 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF 149
Query: 439 KQRIQIALDVATGLNYLHSFTNPPHVHKDINSSNVLLDSDLRAKIANFAMARPAEGQEGE 498
+ + GL Y+HS +H+D+ SN+ ++ D KI +F +AR + +
Sbjct: 150 -----LIYQILRGLKYIHSADI---IHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTG 201
Query: 499 FALTRHIVGTKGYMAPEYLENGL-VSTKLDVYAFGVLILEMLTGK 542
+ V T+ Y APE + N + + +D+++ G ++ E+LTG+
Sbjct: 202 Y------VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 240
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/165 (24%), Positives = 79/165 (47%), Gaps = 20/165 (12%)
Query: 384 KEIALLNKINHSNLIILSGV-----CFNEGNCYLVYEYAVNGTLSDWVFSNKNEGKYLDW 438
+E+ LL + H N+I L V E N + + + L++ V K ++ +
Sbjct: 93 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF 152
Query: 439 KQRIQIALDVATGLNYLHSFTNPPHVHKDINSSNVLLDSDLRAKIANFAMARPAEGQEGE 498
+ + GL Y+HS +H+D+ SN+ ++ D KI +F +AR + +
Sbjct: 153 -----LIYQILRGLKYIHSADI---IHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTG 204
Query: 499 FALTRHIVGTKGYMAPEYLENGL-VSTKLDVYAFGVLILEMLTGK 542
+ V T+ Y APE + N + + +D+++ G ++ E+LTG+
Sbjct: 205 Y------VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 243
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/165 (24%), Positives = 79/165 (47%), Gaps = 20/165 (12%)
Query: 384 KEIALLNKINHSNLIILSGV-----CFNEGNCYLVYEYAVNGTLSDWVFSNKNEGKYLDW 438
+E+ LL + H N+I L V E N + + + L++ V K ++ +
Sbjct: 82 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF 141
Query: 439 KQRIQIALDVATGLNYLHSFTNPPHVHKDINSSNVLLDSDLRAKIANFAMARPAEGQEGE 498
+ + GL Y+HS +H+D+ SN+ ++ D KI +F +AR + +
Sbjct: 142 -----LIYQILRGLKYIHSADI---IHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTG 193
Query: 499 FALTRHIVGTKGYMAPEYLENGL-VSTKLDVYAFGVLILEMLTGK 542
+ V T+ Y APE + N + + +D+++ G ++ E+LTG+
Sbjct: 194 Y------VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 232
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/165 (24%), Positives = 79/165 (47%), Gaps = 20/165 (12%)
Query: 384 KEIALLNKINHSNLIILSGV-----CFNEGNCYLVYEYAVNGTLSDWVFSNKNEGKYLDW 438
+E+ LL + H N+I L V E N + + + L++ V K ++ +
Sbjct: 67 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF 126
Query: 439 KQRIQIALDVATGLNYLHSFTNPPHVHKDINSSNVLLDSDLRAKIANFAMARPAEGQEGE 498
+ + GL Y+HS +H+D+ SN+ ++ D KI +F +AR + +
Sbjct: 127 -----LIYQILRGLKYIHSADI---IHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTG 178
Query: 499 FALTRHIVGTKGYMAPEYLENGL-VSTKLDVYAFGVLILEMLTGK 542
+ V T+ Y APE + N + + +D+++ G ++ E+LTG+
Sbjct: 179 Y------VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 217
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/165 (24%), Positives = 79/165 (47%), Gaps = 20/165 (12%)
Query: 384 KEIALLNKINHSNLIILSGV-----CFNEGNCYLVYEYAVNGTLSDWVFSNKNEGKYLDW 438
+E+ LL + H N+I L V E N + + + L++ V K ++ +
Sbjct: 82 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF 141
Query: 439 KQRIQIALDVATGLNYLHSFTNPPHVHKDINSSNVLLDSDLRAKIANFAMARPAEGQEGE 498
+ + GL Y+HS +H+D+ SN+ ++ D KI +F +AR + +
Sbjct: 142 -----LIYQILRGLKYIHSADI---IHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTG 193
Query: 499 FALTRHIVGTKGYMAPEYLENGL-VSTKLDVYAFGVLILEMLTGK 542
+ V T+ Y APE + N + + +D+++ G ++ E+LTG+
Sbjct: 194 Y------VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 232
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/165 (24%), Positives = 79/165 (47%), Gaps = 20/165 (12%)
Query: 384 KEIALLNKINHSNLIILSGV-----CFNEGNCYLVYEYAVNGTLSDWVFSNKNEGKYLDW 438
+E+ LL + H N+I L V E N + + + L++ V K ++ +
Sbjct: 82 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF 141
Query: 439 KQRIQIALDVATGLNYLHSFTNPPHVHKDINSSNVLLDSDLRAKIANFAMARPAEGQEGE 498
+ + GL Y+HS +H+D+ SN+ ++ D KI +F +AR + +
Sbjct: 142 -----LIYQILRGLKYIHSADI---IHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTG 193
Query: 499 FALTRHIVGTKGYMAPEYLENGL-VSTKLDVYAFGVLILEMLTGK 542
+ V T+ Y APE + N + + +D+++ G ++ E+LTG+
Sbjct: 194 Y------VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 232
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/165 (24%), Positives = 79/165 (47%), Gaps = 20/165 (12%)
Query: 384 KEIALLNKINHSNLIILSGV-----CFNEGNCYLVYEYAVNGTLSDWVFSNKNEGKYLDW 438
+E+ LL + H N+I L V E N + + + L++ V K ++ +
Sbjct: 90 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF 149
Query: 439 KQRIQIALDVATGLNYLHSFTNPPHVHKDINSSNVLLDSDLRAKIANFAMARPAEGQEGE 498
+ + GL Y+HS +H+D+ SN+ ++ D KI +F +AR + +
Sbjct: 150 -----LIYQILRGLKYIHSADI---IHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTG 201
Query: 499 FALTRHIVGTKGYMAPEYLENGL-VSTKLDVYAFGVLILEMLTGK 542
+ V T+ Y APE + N + + +D+++ G ++ E+LTG+
Sbjct: 202 Y------VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 240
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/165 (24%), Positives = 79/165 (47%), Gaps = 20/165 (12%)
Query: 384 KEIALLNKINHSNLIILSGV-----CFNEGNCYLVYEYAVNGTLSDWVFSNKNEGKYLDW 438
+E+ LL + H N+I L V E N + + + L++ V K ++ +
Sbjct: 76 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF 135
Query: 439 KQRIQIALDVATGLNYLHSFTNPPHVHKDINSSNVLLDSDLRAKIANFAMARPAEGQEGE 498
+ + GL Y+HS +H+D+ SN+ ++ D KI +F +AR + +
Sbjct: 136 -----LIYQILRGLKYIHSADI---IHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTG 187
Query: 499 FALTRHIVGTKGYMAPEYLENGL-VSTKLDVYAFGVLILEMLTGK 542
+ V T+ Y APE + N + + +D+++ G ++ E+LTG+
Sbjct: 188 Y------VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 226
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/165 (24%), Positives = 79/165 (47%), Gaps = 20/165 (12%)
Query: 384 KEIALLNKINHSNLIILSGV-----CFNEGNCYLVYEYAVNGTLSDWVFSNKNEGKYLDW 438
+E+ LL + H N+I L V E N + + + L++ V K ++ +
Sbjct: 81 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF 140
Query: 439 KQRIQIALDVATGLNYLHSFTNPPHVHKDINSSNVLLDSDLRAKIANFAMARPAEGQEGE 498
+ + GL Y+HS +H+D+ SN+ ++ D KI +F +AR + +
Sbjct: 141 -----LIYQILRGLKYIHSADI---IHRDLKPSNLAVNEDXELKILDFGLARHTDDEMTG 192
Query: 499 FALTRHIVGTKGYMAPEYLENGL-VSTKLDVYAFGVLILEMLTGK 542
+ V T+ Y APE + N + + +D+++ G ++ E+LTG+
Sbjct: 193 Y------VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 231
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/195 (23%), Positives = 89/195 (45%), Gaps = 21/195 (10%)
Query: 354 SFTCRIQGSVYRGKINGGFAAIKKVNGDVSKEIALLNKINHSNLIILSGV-----CFNEG 408
+F + V K++ F +I +E+ LL + H N+I L V E
Sbjct: 47 AFDTKTGHRVAVKKLSRPFQSIIHAKR-TYRELRLLKHMKHENVIGLLDVFTPARSLEEF 105
Query: 409 NCYLVYEYAVNGTLSDWVFSNKNEGKYLDWKQRIQIALDVATGLNYLHSFTNPPHVHKDI 468
N + + + L++ V K ++ + + + GL Y+HS +H+D+
Sbjct: 106 NDVYLVTHLMGADLNNIVKCQKLTDDHVQF-----LIYQILRGLKYIHSADI---IHRDL 157
Query: 469 NSSNVLLDSDLRAKIANFAMARPAEGQEGEFALTRHIVGTKGYMAPEYLENGL-VSTKLD 527
SN+ ++ D KI +F +AR + + + V T+ Y APE + N + + +D
Sbjct: 158 KPSNLAVNEDCELKILDFGLARHTDDEMTGY------VATRWYRAPEIMLNWMHYNQTVD 211
Query: 528 VYAFGVLILEMLTGK 542
+++ G ++ E+LTG+
Sbjct: 212 IWSVGCIMAELLTGR 226
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/165 (24%), Positives = 79/165 (47%), Gaps = 20/165 (12%)
Query: 384 KEIALLNKINHSNLIILSGV-----CFNEGNCYLVYEYAVNGTLSDWVFSNKNEGKYLDW 438
+E+ LL + H N+I L V E N + + + L++ V K ++ +
Sbjct: 66 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF 125
Query: 439 KQRIQIALDVATGLNYLHSFTNPPHVHKDINSSNVLLDSDLRAKIANFAMARPAEGQEGE 498
+ + GL Y+HS +H+D+ SN+ ++ D KI +F +AR + +
Sbjct: 126 -----LIYQILRGLKYIHSADI---IHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTG 177
Query: 499 FALTRHIVGTKGYMAPEYLENGL-VSTKLDVYAFGVLILEMLTGK 542
+ V T+ Y APE + N + + +D+++ G ++ E+LTG+
Sbjct: 178 Y------VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/165 (24%), Positives = 79/165 (47%), Gaps = 20/165 (12%)
Query: 384 KEIALLNKINHSNLIILSGV-----CFNEGNCYLVYEYAVNGTLSDWVFSNKNEGKYLDW 438
+E+ LL + H N+I L V E N + + + L++ V K ++ +
Sbjct: 89 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF 148
Query: 439 KQRIQIALDVATGLNYLHSFTNPPHVHKDINSSNVLLDSDLRAKIANFAMARPAEGQEGE 498
+ + GL Y+HS +H+D+ SN+ ++ D KI +F +AR + +
Sbjct: 149 -----LIYQILRGLKYIHSADI---IHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTG 200
Query: 499 FALTRHIVGTKGYMAPEYLENGL-VSTKLDVYAFGVLILEMLTGK 542
+ V T+ Y APE + N + + +D+++ G ++ E+LTG+
Sbjct: 201 Y------VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 239
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/165 (30%), Positives = 75/165 (45%), Gaps = 12/165 (7%)
Query: 382 VSKEIALLNKINHSNLIILSGVCFNEGNCYLVYEYAVNGTLSDWVFSNKNEGKYLDWKQR 441
+ +EIAL + H N++ G G + E G+LS + S G D +Q
Sbjct: 66 LHEEIALHKHLKHKNIVQYLGSFSENGFIKIFMEQVPGGSLSALLRSK--WGPLKDNEQT 123
Query: 442 IQI-ALDVATGLNYLHSFTNPPHVHKDINSSNVLLDS-DLRAKIANFAMARPAEGQEGEF 499
I + GL YLH + VH+DI NVL+++ KI++F ++ G
Sbjct: 124 IGFYTKQILEGLKYLH---DNQIVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGIN--- 177
Query: 500 ALTRHIVGTKGYMAPEYLENGL--VSTKLDVYAFGVLILEMLTGK 542
T GT YMAPE ++ G D+++ G I+EM TGK
Sbjct: 178 PCTETFTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGK 222
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/165 (24%), Positives = 79/165 (47%), Gaps = 20/165 (12%)
Query: 384 KEIALLNKINHSNLIILSGV-----CFNEGNCYLVYEYAVNGTLSDWVFSNKNEGKYLDW 438
+E+ LL + H N+I L V E N + + + L++ V K ++ +
Sbjct: 67 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF 126
Query: 439 KQRIQIALDVATGLNYLHSFTNPPHVHKDINSSNVLLDSDLRAKIANFAMARPAEGQEGE 498
+ + GL Y+HS +H+D+ SN+ ++ D KI +F +AR + +
Sbjct: 127 -----LIYQILRGLKYIHSADI---IHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTG 178
Query: 499 FALTRHIVGTKGYMAPEYLENGL-VSTKLDVYAFGVLILEMLTGK 542
+ V T+ Y APE + N + + +D+++ G ++ E+LTG+
Sbjct: 179 Y------VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 217
>pdb|4FVP|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain (Apo
Form)
pdb|4FVQ|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain
(Mg-Atp-Bound Form)
Length = 289
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/242 (21%), Positives = 109/242 (45%), Gaps = 29/242 (11%)
Query: 387 ALLNKINHSNLIILSGVCFNEGNCYLVYEYAVNGTLSDWVFSNKNEGKYLDWKQRIQIAL 446
++++K++H +L++ GVC LV E+ G+L ++ NKN L WK +++A
Sbjct: 64 SMMSKLSHKHLVLNYGVCVCGDENILVQEFVKFGSLDTYLKKNKNCINIL-WK--LEVAK 120
Query: 447 DVATGLNYLHSFTNPPHVHKDINSSNVLLDSDLRAKIANFAMARPAEGQEGEFALTRHIV 506
+A +++L T +H ++ + N+LL + K N + ++ L + I+
Sbjct: 121 QLAAAMHFLEENT---LIHGNVCAKNILLIREEDRKTGNPPFIKLSDPGISITVLPKDIL 177
Query: 507 GTK-GYMAPEYLENGL-VSTKLDVYAFGVLILEMLTGKEAAALHAEENNMHLSDVLNAVL 564
+ ++ PE +EN ++ D ++FG + E+ +G + L
Sbjct: 178 QERIPWVPPECIENPKNLNLATDKWSFGTTLWEICSGGDKP------------------L 219
Query: 565 TKEDGEESLRHFIDPTLQGNYPLELALLVIRLIDACLKKDPTDRPTMYEIEHSLSNILNA 624
+ D + L+ + D + P A + LI+ C+ +P RP+ I L+++
Sbjct: 220 SALDSQRKLQFYED---RHQLPAPKAAELANLINNCMDYEPDHRPSFRAIIRDLNSLFTP 276
Query: 625 SL 626
L
Sbjct: 277 DL 278
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/165 (24%), Positives = 79/165 (47%), Gaps = 20/165 (12%)
Query: 384 KEIALLNKINHSNLIILSGV-----CFNEGNCYLVYEYAVNGTLSDWVFSNKNEGKYLDW 438
+E+ LL + H N+I L V E N + + + L++ V K ++ +
Sbjct: 81 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF 140
Query: 439 KQRIQIALDVATGLNYLHSFTNPPHVHKDINSSNVLLDSDLRAKIANFAMARPAEGQEGE 498
+ + GL Y+HS +H+D+ SN+ ++ D KI +F +AR + +
Sbjct: 141 -----LIYQILRGLKYIHSADI---IHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTG 192
Query: 499 FALTRHIVGTKGYMAPEYLENGL-VSTKLDVYAFGVLILEMLTGK 542
+ V T+ Y APE + N + + +D+++ G ++ E+LTG+
Sbjct: 193 Y------VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 231
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/190 (28%), Positives = 90/190 (47%), Gaps = 25/190 (13%)
Query: 365 RGKINGGFAAIKKV----------NGDVSKEIALLNKINHSNLIILSGVCFNEGNCYLVY 414
+ K+ G AIK + +G + E+A+L +++H N++ L ++ N YLV
Sbjct: 24 KDKLTGAERAIKIIKKSSVTTTSNSGALLDEVAVLKQLDHPNIMKLYEFFEDKRNYYLVM 83
Query: 415 EYAVNGTLSDWVFSNKNEGKYLDWKQRIQIALDVATGLNYLHSFTNPPHVHKDINSSNVL 474
E G L D + + K+ + + I V +G YLH VH+D+ N+L
Sbjct: 84 EVYRGGELFDEIILRQ---KFSEVDAAV-IMKQVLSGTTYLHKHNI---VHRDLKPENLL 136
Query: 475 LDSDLR---AKIANFAMARPAEGQEGEFALTRHIVGTKGYMAPEYLENGLVSTKLDVYAF 531
L+S R KI +F ++ A + G + +GT Y+APE L K DV++
Sbjct: 137 LESKSRDALIKIVDFGLS--AHFEVG--GKMKERLGTAYYIAPEVLRKK-YDEKCDVWSC 191
Query: 532 GVLILEMLTG 541
GV++ +L G
Sbjct: 192 GVILYILLCG 201
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/158 (27%), Positives = 74/158 (46%), Gaps = 15/158 (9%)
Query: 385 EIALLNKINHSNLIILSGVCFNEGNCYLVYEYAVNGTLSDWVFSN-KNEGKYLDWKQRIQ 443
E +L +N L+ L + N Y+V EY G + FS+ + G++ + R
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEM----FSHLRRIGRFSEPHARFY 146
Query: 444 IALDVATGLNYLHSFTNPPHVHKDINSSNVLLDSDLRAKIANFAMARPAEGQEGEFALTR 503
A V T YLHS +++D+ N+L+D ++ +F A+ +G+ T
Sbjct: 147 AAQIVLT-FEYLHSLD---LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR------TW 196
Query: 504 HIVGTKGYMAPEYLENGLVSTKLDVYAFGVLILEMLTG 541
+ GT +APE + + + +D +A GVLI EM G
Sbjct: 197 XLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/195 (23%), Positives = 89/195 (45%), Gaps = 21/195 (10%)
Query: 354 SFTCRIQGSVYRGKINGGFAAIKKVNGDVSKEIALLNKINHSNLIILSGV-----CFNEG 408
+F + V K++ F +I +E+ LL + H N+I L V E
Sbjct: 41 AFDTKTGHRVAVKKLSRPFQSIIHAKR-TYRELRLLKHMKHENVIGLLDVFTPARSLEEF 99
Query: 409 NCYLVYEYAVNGTLSDWVFSNKNEGKYLDWKQRIQIALDVATGLNYLHSFTNPPHVHKDI 468
N + + + L++ V K ++ + + + GL Y+HS +H+D+
Sbjct: 100 NDVYLVTHLMGADLNNIVKCQKLTDDHVQF-----LIYQILRGLKYIHSADI---IHRDL 151
Query: 469 NSSNVLLDSDLRAKIANFAMARPAEGQEGEFALTRHIVGTKGYMAPEYLENGL-VSTKLD 527
SN+ ++ D KI +F +AR + + + V T+ Y APE + N + + +D
Sbjct: 152 KPSNLAVNEDCELKILDFYLARHTDDEMTGY------VATRWYRAPEIMLNWMHYNQTVD 205
Query: 528 VYAFGVLILEMLTGK 542
+++ G ++ E+LTG+
Sbjct: 206 IWSVGCIMAELLTGR 220
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/164 (31%), Positives = 77/164 (46%), Gaps = 11/164 (6%)
Query: 381 DVSKEIALLNKINHSNLIILSGVCFNEGNC-YLVYEYAVNGTLSDWVFSNKNEGKYLDWK 439
++ KEI + +NH N++ G EGN YL EY G L D + + G
Sbjct: 51 NIKKEICINKMLNHENVVKFYG-HRREGNIQYLFLEYCSGGELFDRI--EPDIGMPEPDA 107
Query: 440 QRIQIALDVATGLNYLHSFTNPPHVHKDINSSNVLLDSDLRAKIANFAMARPAEGQEGEF 499
QR L G+ YLH H+DI N+LLD KI++F +A E
Sbjct: 108 QRFFHQL--MAGVVYLHGIGI---THRDIKPENLLLDERDNLKISDFGLATVFRYNNRER 162
Query: 500 ALTRHIVGTKGYMAPEYLENG-LVSTKLDVYAFGVLILEMLTGK 542
L + + GT Y+APE L+ + +DV++ G+++ ML G+
Sbjct: 163 LLNK-MCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 205
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/210 (23%), Positives = 93/210 (44%), Gaps = 29/210 (13%)
Query: 361 GSVYRGK--INGGFAAIKKVNGD--------VSKEIALLNKINHSNLIILSGVCFNEGNC 410
+VY+GK + A+K++ + +E++LL + H+N++ L + E +
Sbjct: 16 ATVYKGKSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIIHTEKSL 75
Query: 411 YLVYEYAVNGTLSDWVFSNKNEGKYLDWKQRIQIALDVATGLNYLHSFTNPPHVHKDINS 470
LV+EY ++ L ++ + G ++ + GL Y H +H+D+
Sbjct: 76 TLVFEY-LDKDLKQYL---DDCGNIINMHNVKLFLFQLLRGLAYCH---RQKVLHRDLKP 128
Query: 471 SNVLLDSDLRAKIANFAMAR----PAEGQEGEFALTRHIVGTKGYMAPEYLENGL-VSTK 525
N+L++ K+A+F +AR P + + E V T Y P+ L ST+
Sbjct: 129 QNLLINERGELKLADFGLARAKSIPTKTYDNE-------VVTLWYRPPDILLGSTDYSTQ 181
Query: 526 LDVYAFGVLILEMLTGKEAAALHAEENNMH 555
+D++ G + EM TG+ E +H
Sbjct: 182 IDMWGVGCIFYEMATGRPLFPGSTVEEQLH 211
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/189 (28%), Positives = 86/189 (45%), Gaps = 25/189 (13%)
Query: 370 GGFAAIKKVNGDVSK--------EIALLNKINHSNLI----ILSGVCFNEGN--CYLVYE 415
G AIK+ ++S EI ++ K+NH N++ + G+ N L E
Sbjct: 39 GEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSAREVPDGLQKLAPNDLPLLAME 98
Query: 416 YAVNGTLSDWVFSNKNEGKYLDWKQRIQIALDVATGLNYLHSFTNPPHVHKDINSSNVLL 475
Y G L ++ +N + R ++ D+++ L YLH +H+D+ N++L
Sbjct: 99 YCEGGDLRKYLNQFENCCGLKEGPIRTLLS-DISSALRYLHENRI---IHRDLKPENIVL 154
Query: 476 D---SDLRAKIANFAMARPAEGQEGEFALTRHIVGTKGYMAPEYLENGLVSTKLDVYAFG 532
L KI + A+ E +GE L VGT Y+APE LE + +D ++FG
Sbjct: 155 QPGPQRLIHKIIDLGYAK--ELDQGE--LCTEFVGTLQYLAPELLEQKKYTVTVDYWSFG 210
Query: 533 VLILEMLTG 541
L E +TG
Sbjct: 211 TLAFECITG 219
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/164 (31%), Positives = 77/164 (46%), Gaps = 11/164 (6%)
Query: 381 DVSKEIALLNKINHSNLIILSGVCFNEGNC-YLVYEYAVNGTLSDWVFSNKNEGKYLDWK 439
++ KEI + +NH N++ G EGN YL EY G L D + + G
Sbjct: 50 NIKKEICINKMLNHENVVKFYG-HRREGNIQYLFLEYCSGGELFDRI--EPDIGMPEPDA 106
Query: 440 QRIQIALDVATGLNYLHSFTNPPHVHKDINSSNVLLDSDLRAKIANFAMARPAEGQEGEF 499
QR L G+ YLH H+DI N+LLD KI++F +A E
Sbjct: 107 QRFFHQL--MAGVVYLHGIGI---THRDIKPENLLLDERDNLKISDFGLATVFRYNNRER 161
Query: 500 ALTRHIVGTKGYMAPEYLENG-LVSTKLDVYAFGVLILEMLTGK 542
L + + GT Y+APE L+ + +DV++ G+++ ML G+
Sbjct: 162 LLNK-MCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 204
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/165 (24%), Positives = 79/165 (47%), Gaps = 20/165 (12%)
Query: 384 KEIALLNKINHSNLIILSGV-----CFNEGNCYLVYEYAVNGTLSDWVFSNKNEGKYLDW 438
+E+ LL + H N+I L V E N + + + L++ V S K ++ +
Sbjct: 70 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKSQKLTDDHVQF 129
Query: 439 KQRIQIALDVATGLNYLHSFTNPPHVHKDINSSNVLLDSDLRAKIANFAMARPAEGQEGE 498
+ + GL Y+HS +H+D+ SN+ ++ D KI +F + R + +
Sbjct: 130 -----LIYQILRGLKYIHSADI---IHRDLKPSNLAVNEDSELKILDFGLCRHTDDEMTG 181
Query: 499 FALTRHIVGTKGYMAPEYLENGL-VSTKLDVYAFGVLILEMLTGK 542
+ V T+ Y APE + N + + +D+++ G ++ E+LTG+
Sbjct: 182 Y------VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/165 (30%), Positives = 75/165 (45%), Gaps = 12/165 (7%)
Query: 382 VSKEIALLNKINHSNLIILSGVCFNEGNCYLVYEYAVNGTLSDWVFSNKNEGKYLDWKQR 441
+ +EIAL + H N++ G G + E G+LS + S G D +Q
Sbjct: 52 LHEEIALHKHLKHKNIVQYLGSFSENGFIKIFMEQVPGGSLSALLRSK--WGPLKDNEQT 109
Query: 442 IQI-ALDVATGLNYLHSFTNPPHVHKDINSSNVLLDS-DLRAKIANFAMARPAEGQEGEF 499
I + GL YLH + VH+DI NVL+++ KI++F ++ G
Sbjct: 110 IGFYTKQILEGLKYLH---DNQIVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGIN--- 163
Query: 500 ALTRHIVGTKGYMAPEYLENGL--VSTKLDVYAFGVLILEMLTGK 542
T GT YMAPE ++ G D+++ G I+EM TGK
Sbjct: 164 PCTETFTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGK 208
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/189 (28%), Positives = 86/189 (45%), Gaps = 25/189 (13%)
Query: 370 GGFAAIKKVNGDVSK--------EIALLNKINHSNLI----ILSGVCFNEGN--CYLVYE 415
G AIK+ ++S EI ++ K+NH N++ + G+ N L E
Sbjct: 40 GEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSAREVPDGLQKLAPNDLPLLAME 99
Query: 416 YAVNGTLSDWVFSNKNEGKYLDWKQRIQIALDVATGLNYLHSFTNPPHVHKDINSSNVLL 475
Y G L ++ +N + R ++ D+++ L YLH +H+D+ N++L
Sbjct: 100 YCEGGDLRKYLNQFENCCGLKEGPIRTLLS-DISSALRYLHENRI---IHRDLKPENIVL 155
Query: 476 D---SDLRAKIANFAMARPAEGQEGEFALTRHIVGTKGYMAPEYLENGLVSTKLDVYAFG 532
L KI + A+ E +GE L VGT Y+APE LE + +D ++FG
Sbjct: 156 QPGPQRLIHKIIDLGYAK--ELDQGE--LCTEFVGTLQYLAPELLEQKKYTVTVDYWSFG 211
Query: 533 VLILEMLTG 541
L E +TG
Sbjct: 212 TLAFECITG 220
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/164 (31%), Positives = 77/164 (46%), Gaps = 11/164 (6%)
Query: 381 DVSKEIALLNKINHSNLIILSGVCFNEGNC-YLVYEYAVNGTLSDWVFSNKNEGKYLDWK 439
++ KEI + +NH N++ G EGN YL EY G L D + + G
Sbjct: 51 NIKKEICINKMLNHENVVKFYG-HRREGNIQYLFLEYCSGGELFDRI--EPDIGMPEPDA 107
Query: 440 QRIQIALDVATGLNYLHSFTNPPHVHKDINSSNVLLDSDLRAKIANFAMARPAEGQEGEF 499
QR L G+ YLH H+DI N+LLD KI++F +A E
Sbjct: 108 QRFFHQL--MAGVVYLHGIGI---THRDIKPENLLLDERDNLKISDFGLATVFRYNNRER 162
Query: 500 ALTRHIVGTKGYMAPEYLENG-LVSTKLDVYAFGVLILEMLTGK 542
L + + GT Y+APE L+ + +DV++ G+++ ML G+
Sbjct: 163 LLNK-MCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 205
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/164 (31%), Positives = 77/164 (46%), Gaps = 11/164 (6%)
Query: 381 DVSKEIALLNKINHSNLIILSGVCFNEGNC-YLVYEYAVNGTLSDWVFSNKNEGKYLDWK 439
++ KEI + +NH N++ G EGN YL EY G L D + + G
Sbjct: 51 NIKKEICINKMLNHENVVKFYG-HRREGNIQYLFLEYCSGGELFDRI--EPDIGMPEPDA 107
Query: 440 QRIQIALDVATGLNYLHSFTNPPHVHKDINSSNVLLDSDLRAKIANFAMARPAEGQEGEF 499
QR L G+ YLH H+DI N+LLD KI++F +A E
Sbjct: 108 QRFFHQL--MAGVVYLHGIGI---THRDIKPENLLLDERDNLKISDFGLATVFRYNNRER 162
Query: 500 ALTRHIVGTKGYMAPEYLENG-LVSTKLDVYAFGVLILEMLTGK 542
L + + GT Y+APE L+ + +DV++ G+++ ML G+
Sbjct: 163 LLNK-MCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 205
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/164 (31%), Positives = 77/164 (46%), Gaps = 11/164 (6%)
Query: 381 DVSKEIALLNKINHSNLIILSGVCFNEGNC-YLVYEYAVNGTLSDWVFSNKNEGKYLDWK 439
++ KEI + +NH N++ G EGN YL EY G L D + + G
Sbjct: 51 NIKKEICINKMLNHENVVKFYG-HRREGNIQYLFLEYCSGGELFDRI--EPDIGMPEPDA 107
Query: 440 QRIQIALDVATGLNYLHSFTNPPHVHKDINSSNVLLDSDLRAKIANFAMARPAEGQEGEF 499
QR L G+ YLH H+DI N+LLD KI++F +A E
Sbjct: 108 QRFFHQL--MAGVVYLHGIGI---THRDIKPENLLLDERDNLKISDFGLATVFRYNNRER 162
Query: 500 ALTRHIVGTKGYMAPEYLENG-LVSTKLDVYAFGVLILEMLTGK 542
L + + GT Y+APE L+ + +DV++ G+++ ML G+
Sbjct: 163 LLNK-MCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 205
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 81/164 (49%), Gaps = 20/164 (12%)
Query: 384 KEIALLNKINHSNLIILSGVCFNEG------NCYLVYEYAVNGTLSDWVFSNKNEGKYLD 437
+E+ L+ +NH N+I L V + + Y+V E ++ LS + LD
Sbjct: 72 RELVLMKVVNHKNIIGLLNVFTPQKSLEEFQDVYIVME-LMDANLSQVIQME------LD 124
Query: 438 WKQRIQIALDVATGLNYLHSFTNPPHVHKDINSSNVLLDSDLRAKIANFAMARPAEGQEG 497
++ + + G+ +LHS +H+D+ SN+++ SD KI +F +AR A
Sbjct: 125 HERMSYLLYQMLVGIKHLHSAGI---IHRDLKPSNIVVKSDATLKILDFGLARTAGTS-- 179
Query: 498 EFALTRHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLILEMLTG 541
F +T ++V T+ Y APE + +D+++ G ++ EM+ G
Sbjct: 180 -FMMTPYVV-TRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/165 (24%), Positives = 79/165 (47%), Gaps = 20/165 (12%)
Query: 384 KEIALLNKINHSNLIILSGV-----CFNEGNCYLVYEYAVNGTLSDWVFSNKNEGKYLDW 438
+E+ LL + H N+I L V E N + + + L++ V K ++ +
Sbjct: 72 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF 131
Query: 439 KQRIQIALDVATGLNYLHSFTNPPHVHKDINSSNVLLDSDLRAKIANFAMARPAEGQEGE 498
+ + GL Y+HS +H+D+ SN+ ++ D KI +F +AR + +
Sbjct: 132 -----LIYQILRGLKYIHSADI---IHRDLKPSNLAVNEDSELKILDFGLARHTDDEMTG 183
Query: 499 FALTRHIVGTKGYMAPEYLENGL-VSTKLDVYAFGVLILEMLTGK 542
+ V T+ Y APE + N + + +D+++ G ++ E+LTG+
Sbjct: 184 Y------VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 222
>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The
Murine Receptor Tyrosine Kinase Tyro3 (Sky)
Length = 323
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 65/287 (22%), Positives = 125/287 (43%), Gaps = 51/287 (17%)
Query: 361 GSVYRGKI---NGGFA--AIKKVNGDVS---------KEIALLNKINHSNLIILSGVCFN 406
GSV ++ +G F A+K + D+ +E A + + +H ++ L GV
Sbjct: 37 GSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEFDHPHVAKLVGVSLR 96
Query: 407 ---EGNC---YLVYEYAVNGTLSDWVFSNK-NEGKY-LDWKQRIQIALDVATGLNYLHSF 458
+G ++ + +G L ++ +++ E + L + ++ +D+A G+ YL S
Sbjct: 97 SRAKGRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMVDIACGMEYLSSR 156
Query: 459 TNPPHVHKDINSSNVLLDSDLRAKIANFAMARPAEGQEGEFALTRHIVGTK---GYMAPE 515
+H+D+ + N +L D+ +A+F ++R G++ R +K ++A E
Sbjct: 157 N---FIHRDLAARNCMLAEDMTVCVADFGLSRKI--YSGDY--YRQGCASKLPVKWLALE 209
Query: 516 YLENGLVSTKLDVYAFGVLILEMLTGKEAAALHAEENNMHLSDVLNAVLTKEDGEESLRH 575
L + L + DV+AFGV + E++T + E +++ N ++ G L+
Sbjct: 210 SLADNLYTVHSDVWAFGVTMWEIMTRGQTPYAGIEN-----AEIYNYLI----GGNRLKQ 260
Query: 576 FIDPTLQGNYPLELALLVIRLIDACLKKDPTDRPTMYEIEHSLSNIL 622
P E V L+ C DP RP+ + L NIL
Sbjct: 261 ----------PPECMEEVYDLMYQCWSADPKQRPSFTCLRMELENIL 297
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/165 (24%), Positives = 79/165 (47%), Gaps = 20/165 (12%)
Query: 384 KEIALLNKINHSNLIILSGV-----CFNEGNCYLVYEYAVNGTLSDWVFSNKNEGKYLDW 438
+E+ LL + H N+I L V E N + + + L++ V K ++ +
Sbjct: 76 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF 135
Query: 439 KQRIQIALDVATGLNYLHSFTNPPHVHKDINSSNVLLDSDLRAKIANFAMARPAEGQEGE 498
+ + GL Y+HS +H+D+ SN+ ++ D KI +F +AR + +
Sbjct: 136 -----LIYQILRGLKYIHSADI---IHRDLKPSNLAVNEDSELKILDFGLARHTDDEMTG 187
Query: 499 FALTRHIVGTKGYMAPEYLENGL-VSTKLDVYAFGVLILEMLTGK 542
+ V T+ Y APE + N + + +D+++ G ++ E+LTG+
Sbjct: 188 Y------VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 226
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/166 (25%), Positives = 85/166 (51%), Gaps = 17/166 (10%)
Query: 381 DVSKEIALLNKINHSNLIILSGVCFNEGNCYLVYEYAVNGTLSDWVFSNKNEGKYLDWKQ 440
++ +E+++L ++ H N+I L V N + L+ E G L D++ ++ L ++
Sbjct: 61 EIEREVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKES----LSEEE 116
Query: 441 RIQIALDVATGLNYLHSFTNPPHVHKDINSSNV-LLDSDL---RAKIANFAMARPAEGQE 496
+ G+NYLH+ H D+ N+ LLD ++ K+ +F +A E ++
Sbjct: 117 ATSFIKQILDGVNYLHT---KKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAH--EIED 171
Query: 497 G-EFALTRHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLILEMLTG 541
G EF ++I GT ++APE + + + D+++ GV+ +L+G
Sbjct: 172 GVEF---KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 214
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/164 (31%), Positives = 77/164 (46%), Gaps = 11/164 (6%)
Query: 381 DVSKEIALLNKINHSNLIILSGVCFNEGNC-YLVYEYAVNGTLSDWVFSNKNEGKYLDWK 439
++ KEI + +NH N++ G EGN YL EY G L D + + G
Sbjct: 51 NIKKEICINKMLNHENVVKFYG-HRREGNIQYLFLEYCSGGELFDRI--EPDIGMPEPDA 107
Query: 440 QRIQIALDVATGLNYLHSFTNPPHVHKDINSSNVLLDSDLRAKIANFAMARPAEGQEGEF 499
QR L G+ YLH H+DI N+LLD KI++F +A E
Sbjct: 108 QRFFHQL--MAGVVYLHGIGI---THRDIKPENLLLDERDNLKISDFGLATVFRYNNRER 162
Query: 500 ALTRHIVGTKGYMAPEYLENG-LVSTKLDVYAFGVLILEMLTGK 542
L + + GT Y+APE L+ + +DV++ G+++ ML G+
Sbjct: 163 LLNK-MCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 205
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/164 (31%), Positives = 77/164 (46%), Gaps = 11/164 (6%)
Query: 381 DVSKEIALLNKINHSNLIILSGVCFNEGNC-YLVYEYAVNGTLSDWVFSNKNEGKYLDWK 439
++ KEI + +NH N++ G EGN YL EY G L D + + G
Sbjct: 49 NIKKEICINKMLNHENVVKFYG-HRREGNIQYLFLEYCSGGELFDRI--EPDIGMPEPDA 105
Query: 440 QRIQIALDVATGLNYLHSFTNPPHVHKDINSSNVLLDSDLRAKIANFAMARPAEGQEGEF 499
QR L G+ YLH H+DI N+LLD KI++F +A E
Sbjct: 106 QRFFHQL--MAGVVYLHGIGI---THRDIKPENLLLDERDNLKISDFGLATVFRYNNRER 160
Query: 500 ALTRHIVGTKGYMAPEYLENG-LVSTKLDVYAFGVLILEMLTGK 542
L + + GT Y+APE L+ + +DV++ G+++ ML G+
Sbjct: 161 LLNK-MCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 203
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/166 (25%), Positives = 85/166 (51%), Gaps = 17/166 (10%)
Query: 381 DVSKEIALLNKINHSNLIILSGVCFNEGNCYLVYEYAVNGTLSDWVFSNKNEGKYLDWKQ 440
++ +E+++L ++ H N+I L V N + L+ E G L D++ ++ L ++
Sbjct: 61 EIEREVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKES----LSEEE 116
Query: 441 RIQIALDVATGLNYLHSFTNPPHVHKDINSSNV-LLDSDL---RAKIANFAMARPAEGQE 496
+ G+NYLH+ H D+ N+ LLD ++ K+ +F +A E ++
Sbjct: 117 ATSFIKQILDGVNYLHT---KKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAH--EIED 171
Query: 497 G-EFALTRHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLILEMLTG 541
G EF ++I GT ++APE + + + D+++ GV+ +L+G
Sbjct: 172 GVEF---KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 214
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/166 (25%), Positives = 85/166 (51%), Gaps = 17/166 (10%)
Query: 381 DVSKEIALLNKINHSNLIILSGVCFNEGNCYLVYEYAVNGTLSDWVFSNKNEGKYLDWKQ 440
++ +E+++L ++ H N+I L V N + L+ E G L D++ ++ L ++
Sbjct: 61 EIEREVSILRQVLHPNIITLHDVYENRTDVVLILELVSGGELFDFLAQKES----LSEEE 116
Query: 441 RIQIALDVATGLNYLHSFTNPPHVHKDINSSNV-LLDSDL---RAKIANFAMARPAEGQE 496
+ G+NYLH+ H D+ N+ LLD ++ K+ +F +A E ++
Sbjct: 117 ATSFIKQILDGVNYLHT---KKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAH--EIED 171
Query: 497 G-EFALTRHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLILEMLTG 541
G EF ++I GT ++APE + + + D+++ GV+ +L+G
Sbjct: 172 GVEF---KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 214
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/165 (24%), Positives = 78/165 (47%), Gaps = 20/165 (12%)
Query: 384 KEIALLNKINHSNLIILSGV-----CFNEGNCYLVYEYAVNGTLSDWVFSNKNEGKYLDW 438
+E+ LL + H N+I L V E N + + + L++ V K ++ +
Sbjct: 70 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF 129
Query: 439 KQRIQIALDVATGLNYLHSFTNPPHVHKDINSSNVLLDSDLRAKIANFAMARPAEGQEGE 498
+ + GL Y+HS +H+D+ SN+ ++ D KI F +AR + +
Sbjct: 130 -----LIYQILRGLKYIHSADI---IHRDLKPSNLAVNEDCELKILGFGLARHTDDEMTG 181
Query: 499 FALTRHIVGTKGYMAPEYLENGL-VSTKLDVYAFGVLILEMLTGK 542
+ V T+ Y APE + N + + +D+++ G ++ E+LTG+
Sbjct: 182 Y------VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/190 (24%), Positives = 89/190 (46%), Gaps = 11/190 (5%)
Query: 354 SFTCRIQGSVYRGKINGGFAAIKKVNGDVSKEIALLNKINHSNLIILSGVCFNEGNCYLV 413
++ R++ V K++ F ++ +E+ LL + H N+I L V +
Sbjct: 47 AYDARLRQKVAVKKLSRPFQSLIHAR-RTYRELRLLKHLKHENVIGLLDVFTPATSIEDF 105
Query: 414 YEYAVNGTLSDWVFSNKNEGKYLDWKQRIQIALDVATGLNYLHSFTNPPHVHKDINSSNV 473
E + TL +N + + L + + + GL Y+HS +H+D+ SNV
Sbjct: 106 SEVYLVTTLMGADLNNIVKCQALSDEHVQFLVYQLLRGLKYIHSAGI---IHRDLKPSNV 162
Query: 474 LLDSDLRAKIANFAMARPAEGQEGEFALTRHIVGTKGYMAPEYLENGL-VSTKLDVYAFG 532
++ D +I +F +AR A+ + + V T+ Y APE + N + + +D+++ G
Sbjct: 163 AVNEDSELRILDFGLARQADEEMTGY------VATRWYRAPEIMLNWMHYNQTVDIWSVG 216
Query: 533 VLILEMLTGK 542
++ E+L GK
Sbjct: 217 CIMAELLQGK 226
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/164 (31%), Positives = 77/164 (46%), Gaps = 11/164 (6%)
Query: 381 DVSKEIALLNKINHSNLIILSGVCFNEGNC-YLVYEYAVNGTLSDWVFSNKNEGKYLDWK 439
++ KEI + +NH N++ G EGN YL EY G L D + + G
Sbjct: 51 NIKKEICINKMLNHENVVKFYG-HRREGNIQYLFLEYCSGGELFDRI--EPDIGMPEPDA 107
Query: 440 QRIQIALDVATGLNYLHSFTNPPHVHKDINSSNVLLDSDLRAKIANFAMARPAEGQEGEF 499
QR L G+ YLH H+DI N+LLD KI++F +A E
Sbjct: 108 QRFFHQL--MAGVVYLHGIGI---THRDIKPENLLLDERDNLKISDFGLATVFRYNNRER 162
Query: 500 ALTRHIVGTKGYMAPEYLENG-LVSTKLDVYAFGVLILEMLTGK 542
L + + GT Y+APE L+ + +DV++ G+++ ML G+
Sbjct: 163 LLNK-MCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 205
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/164 (31%), Positives = 77/164 (46%), Gaps = 11/164 (6%)
Query: 381 DVSKEIALLNKINHSNLIILSGVCFNEGNC-YLVYEYAVNGTLSDWVFSNKNEGKYLDWK 439
++ KEI + +NH N++ G EGN YL EY G L D + + G
Sbjct: 50 NIKKEICINKMLNHENVVKFYG-HRREGNIQYLFLEYCSGGELFDRI--EPDIGMPEPDA 106
Query: 440 QRIQIALDVATGLNYLHSFTNPPHVHKDINSSNVLLDSDLRAKIANFAMARPAEGQEGEF 499
QR L G+ YLH H+DI N+LLD KI++F +A E
Sbjct: 107 QRFFHQL--MAGVVYLHGIGI---THRDIKPENLLLDERDNLKISDFGLATVFRYNNRER 161
Query: 500 ALTRHIVGTKGYMAPEYLENG-LVSTKLDVYAFGVLILEMLTGK 542
L + + GT Y+APE L+ + +DV++ G+++ ML G+
Sbjct: 162 LLNK-MCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 204
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/167 (30%), Positives = 78/167 (46%), Gaps = 18/167 (10%)
Query: 381 DVSKEIALLNKINHSNLIILSGVCFNEGNCYLVYEYAVNGTLSDWVFSNKNEGKYLDWKQ 440
+V EI +L K+NH +I + F+ + Y+V E G L D V NK +
Sbjct: 186 NVETEIEILKKLNHPCIIKIKNF-FDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLY 244
Query: 441 RIQIALDVATGLNYLHSFTNPPHVHKDINSSNVLLDS---DLRAKIANFAMARPAEGQEG 497
Q+ L V YLH +H+D+ NVLL S D KI +F ++ G
Sbjct: 245 FYQMLLAV----QYLHE---NGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL----G 293
Query: 498 EFALTRHIVGTKGYMAPEYLEN---GLVSTKLDVYAFGVLILEMLTG 541
E +L R + GT Y+APE L + + +D ++ GV++ L+G
Sbjct: 294 ETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSG 340
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/164 (31%), Positives = 77/164 (46%), Gaps = 11/164 (6%)
Query: 381 DVSKEIALLNKINHSNLIILSGVCFNEGNC-YLVYEYAVNGTLSDWVFSNKNEGKYLDWK 439
++ KEI + +NH N++ G EGN YL EY G L D + + G
Sbjct: 50 NIKKEICINKMLNHENVVKFYG-HRREGNIQYLFLEYCSGGELFDRI--EPDIGMPEPDA 106
Query: 440 QRIQIALDVATGLNYLHSFTNPPHVHKDINSSNVLLDSDLRAKIANFAMARPAEGQEGEF 499
QR L G+ YLH H+DI N+LLD KI++F +A E
Sbjct: 107 QRFFHQL--MAGVVYLHGIGI---THRDIKPENLLLDERDNLKISDFGLATVFRYNNRER 161
Query: 500 ALTRHIVGTKGYMAPEYLENG-LVSTKLDVYAFGVLILEMLTGK 542
L + + GT Y+APE L+ + +DV++ G+++ ML G+
Sbjct: 162 LLNK-MCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 204
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/165 (24%), Positives = 79/165 (47%), Gaps = 20/165 (12%)
Query: 384 KEIALLNKINHSNLIILSGV-----CFNEGNCYLVYEYAVNGTLSDWVFSNKNEGKYLDW 438
+E+ LL + H N+I L V E N + + + L++ V K ++ +
Sbjct: 66 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCAKLTDDHVQF 125
Query: 439 KQRIQIALDVATGLNYLHSFTNPPHVHKDINSSNVLLDSDLRAKIANFAMARPAEGQEGE 498
+ + GL Y+HS +H+D+ SN+ ++ D KI +F +AR + +
Sbjct: 126 -----LIYQILRGLKYIHSADI---IHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTG 177
Query: 499 FALTRHIVGTKGYMAPEYLENGL-VSTKLDVYAFGVLILEMLTGK 542
+ V T+ Y APE + N + + +D+++ G ++ E+LTG+
Sbjct: 178 Y------VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/166 (25%), Positives = 85/166 (51%), Gaps = 17/166 (10%)
Query: 381 DVSKEIALLNKINHSNLIILSGVCFNEGNCYLVYEYAVNGTLSDWVFSNKNEGKYLDWKQ 440
++ +E+++L ++ H N+I L V N + L+ E G L D++ ++ L ++
Sbjct: 61 EIEREVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKES----LSEEE 116
Query: 441 RIQIALDVATGLNYLHSFTNPPHVHKDINSSNV-LLDSDL---RAKIANFAMARPAEGQE 496
+ G+NYLH+ H D+ N+ LLD ++ K+ +F +A E ++
Sbjct: 117 ATSFIKQILDGVNYLHT---KKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAH--EIED 171
Query: 497 G-EFALTRHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLILEMLTG 541
G EF ++I GT ++APE + + + D+++ GV+ +L+G
Sbjct: 172 GVEF---KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 214
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/167 (30%), Positives = 78/167 (46%), Gaps = 18/167 (10%)
Query: 381 DVSKEIALLNKINHSNLIILSGVCFNEGNCYLVYEYAVNGTLSDWVFSNKNEGKYLDWKQ 440
+V EI +L K+NH +I + F+ + Y+V E G L D V NK +
Sbjct: 200 NVETEIEILKKLNHPCIIKIKNF-FDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLY 258
Query: 441 RIQIALDVATGLNYLHSFTNPPHVHKDINSSNVLLDS---DLRAKIANFAMARPAEGQEG 497
Q+ L V YLH +H+D+ NVLL S D KI +F ++ G
Sbjct: 259 FYQMLLAV----QYLHE---NGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL----G 307
Query: 498 EFALTRHIVGTKGYMAPEYLEN---GLVSTKLDVYAFGVLILEMLTG 541
E +L R + GT Y+APE L + + +D ++ GV++ L+G
Sbjct: 308 ETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSG 354
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/164 (31%), Positives = 77/164 (46%), Gaps = 11/164 (6%)
Query: 381 DVSKEIALLNKINHSNLIILSGVCFNEGNC-YLVYEYAVNGTLSDWVFSNKNEGKYLDWK 439
++ KEI + +NH N++ G EGN YL EY G L D + + G
Sbjct: 50 NIKKEICINKMLNHENVVKFYG-HRREGNIQYLFLEYCSGGELFDRI--EPDIGMPEPDA 106
Query: 440 QRIQIALDVATGLNYLHSFTNPPHVHKDINSSNVLLDSDLRAKIANFAMARPAEGQEGEF 499
QR L G+ YLH H+DI N+LLD KI++F +A E
Sbjct: 107 QRFFHQL--MAGVVYLHGIGI---THRDIKPENLLLDERDNLKISDFGLATVFRYNNRER 161
Query: 500 ALTRHIVGTKGYMAPEYLENG-LVSTKLDVYAFGVLILEMLTGK 542
L + + GT Y+APE L+ + +DV++ G+++ ML G+
Sbjct: 162 LLNK-MCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 204
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/164 (31%), Positives = 77/164 (46%), Gaps = 11/164 (6%)
Query: 381 DVSKEIALLNKINHSNLIILSGVCFNEGNC-YLVYEYAVNGTLSDWVFSNKNEGKYLDWK 439
++ KEI + +NH N++ G EGN YL EY G L D + + G
Sbjct: 50 NIKKEICINKMLNHENVVKFYG-HRREGNIQYLFLEYCSGGELFDRI--EPDIGMPEPDA 106
Query: 440 QRIQIALDVATGLNYLHSFTNPPHVHKDINSSNVLLDSDLRAKIANFAMARPAEGQEGEF 499
QR L G+ YLH H+DI N+LLD KI++F +A E
Sbjct: 107 QRFFHQL--MAGVVYLHGIGI---THRDIKPENLLLDERDNLKISDFGLATVFRYNNRER 161
Query: 500 ALTRHIVGTKGYMAPEYLENG-LVSTKLDVYAFGVLILEMLTGK 542
L + + GT Y+APE L+ + +DV++ G+++ ML G+
Sbjct: 162 LLNK-MCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 204
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/164 (31%), Positives = 77/164 (46%), Gaps = 11/164 (6%)
Query: 381 DVSKEIALLNKINHSNLIILSGVCFNEGNC-YLVYEYAVNGTLSDWVFSNKNEGKYLDWK 439
++ KEI + +NH N++ G EGN YL EY G L D + + G
Sbjct: 50 NIKKEICINKMLNHENVVKFYG-HRREGNIQYLFLEYCSGGELFDRI--EPDIGMPEPDA 106
Query: 440 QRIQIALDVATGLNYLHSFTNPPHVHKDINSSNVLLDSDLRAKIANFAMARPAEGQEGEF 499
QR L G+ YLH H+DI N+LLD KI++F +A E
Sbjct: 107 QRFFHQL--MAGVVYLHGIGI---THRDIKPENLLLDERDNLKISDFGLATVFRYNNRER 161
Query: 500 ALTRHIVGTKGYMAPEYLENG-LVSTKLDVYAFGVLILEMLTGK 542
L + + GT Y+APE L+ + +DV++ G+++ ML G+
Sbjct: 162 LLNK-MCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 204
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/164 (31%), Positives = 77/164 (46%), Gaps = 11/164 (6%)
Query: 381 DVSKEIALLNKINHSNLIILSGVCFNEGNC-YLVYEYAVNGTLSDWVFSNKNEGKYLDWK 439
++ KEI + +NH N++ G EGN YL EY G L D + + G
Sbjct: 50 NIKKEICINKMLNHENVVKFYG-HRREGNIQYLFLEYCSGGELFDRI--EPDIGMPEPDA 106
Query: 440 QRIQIALDVATGLNYLHSFTNPPHVHKDINSSNVLLDSDLRAKIANFAMARPAEGQEGEF 499
QR L G+ YLH H+DI N+LLD KI++F +A E
Sbjct: 107 QRFFHQL--MAGVVYLHGIGI---THRDIKPENLLLDERDNLKISDFGLATVFRYNNRER 161
Query: 500 ALTRHIVGTKGYMAPEYLENG-LVSTKLDVYAFGVLILEMLTGK 542
L + + GT Y+APE L+ + +DV++ G+++ ML G+
Sbjct: 162 LLNK-MCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 204
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/164 (31%), Positives = 77/164 (46%), Gaps = 11/164 (6%)
Query: 381 DVSKEIALLNKINHSNLIILSGVCFNEGNC-YLVYEYAVNGTLSDWVFSNKNEGKYLDWK 439
++ KEI + +NH N++ G EGN YL EY G L D + + G
Sbjct: 50 NIKKEICINKMLNHENVVKFYG-HRREGNIQYLFLEYCSGGELFDRI--EPDIGMPEPDA 106
Query: 440 QRIQIALDVATGLNYLHSFTNPPHVHKDINSSNVLLDSDLRAKIANFAMARPAEGQEGEF 499
QR L G+ YLH H+DI N+LLD KI++F +A E
Sbjct: 107 QRFFHQL--MAGVVYLHGIGI---THRDIKPENLLLDERDNLKISDFGLATVFRYNNRER 161
Query: 500 ALTRHIVGTKGYMAPEYLENG-LVSTKLDVYAFGVLILEMLTGK 542
L + + GT Y+APE L+ + +DV++ G+++ ML G+
Sbjct: 162 LLNK-MXGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 204
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/164 (31%), Positives = 77/164 (46%), Gaps = 11/164 (6%)
Query: 381 DVSKEIALLNKINHSNLIILSGVCFNEGNC-YLVYEYAVNGTLSDWVFSNKNEGKYLDWK 439
++ KEI + +NH N++ G EGN YL EY G L D + + G
Sbjct: 50 NIKKEIXINKMLNHENVVKFYG-HRREGNIQYLFLEYCSGGELFDRI--EPDIGMPEPDA 106
Query: 440 QRIQIALDVATGLNYLHSFTNPPHVHKDINSSNVLLDSDLRAKIANFAMARPAEGQEGEF 499
QR L G+ YLH H+DI N+LLD KI++F +A E
Sbjct: 107 QRFFHQL--MAGVVYLHGIGI---THRDIKPENLLLDERDNLKISDFGLATVFRYNNRER 161
Query: 500 ALTRHIVGTKGYMAPEYLENG-LVSTKLDVYAFGVLILEMLTGK 542
L + + GT Y+APE L+ + +DV++ G+++ ML G+
Sbjct: 162 LLNK-MCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 204
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/165 (24%), Positives = 78/165 (47%), Gaps = 20/165 (12%)
Query: 384 KEIALLNKINHSNLIILSGV-----CFNEGNCYLVYEYAVNGTLSDWVFSNKNEGKYLDW 438
+E+ LL + H N+I L V E N + + + L++ V K ++ +
Sbjct: 77 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF 136
Query: 439 KQRIQIALDVATGLNYLHSFTNPPHVHKDINSSNVLLDSDLRAKIANFAMARPAEGQEGE 498
+ + GL Y+HS +H+D+ SN+ ++ D KI +F +AR +
Sbjct: 137 -----LIYQILRGLKYIHSADI---IHRDLKPSNLAVNEDCELKILDFGLARHTADEMTG 188
Query: 499 FALTRHIVGTKGYMAPEYLENGL-VSTKLDVYAFGVLILEMLTGK 542
+ V T+ Y APE + N + + +D+++ G ++ E+LTG+
Sbjct: 189 Y------VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/166 (25%), Positives = 85/166 (51%), Gaps = 17/166 (10%)
Query: 381 DVSKEIALLNKINHSNLIILSGVCFNEGNCYLVYEYAVNGTLSDWVFSNKNEGKYLDWKQ 440
++ +E+++L ++ H N+I L V N + L+ E G L D++ ++ L ++
Sbjct: 61 EIEREVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKES----LSEEE 116
Query: 441 RIQIALDVATGLNYLHSFTNPPHVHKDINSSNV-LLDSDL---RAKIANFAMARPAEGQE 496
+ G+NYLH+ H D+ N+ LLD ++ K+ +F +A E ++
Sbjct: 117 ATSFIKQILDGVNYLHT---KKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAH--EIED 171
Query: 497 G-EFALTRHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLILEMLTG 541
G EF ++I GT ++APE + + + D+++ GV+ +L+G
Sbjct: 172 GVEF---KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 214
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 68/273 (24%), Positives = 114/273 (41%), Gaps = 47/273 (17%)
Query: 338 LKVYSFKELQSATDNFSFTCRIQGSVY------RGKINGGFAAIKKVNG--DVS------ 383
LK SF D + I Y R ++ G AIKK+ DV
Sbjct: 42 LKARSFDVTFDVGDEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRT 101
Query: 384 -KEIALLNKINHSNLIILSG-----VCFNEGNCYLVYEYAVNGTLSDWVFSNKNEGKYLD 437
+E+ +L H N+I + V + E V + L + S++ L
Sbjct: 102 LRELKILKHFKHDNIIAIKDILRPTVPYGEFKSVYVVLDLMESDLHQIIHSSQP----LT 157
Query: 438 WKQRIQIALDVATGLNYLHSFTNPPHVHKDINSSNVLLDSDLRAKIANFAMAR-----PA 492
+ + GL Y+HS +H+D+ SN+L++ + KI +F MAR PA
Sbjct: 158 LEHVRYFLYQLLRGLKYMHSAQV---IHRDLKPSNLLVNENCELKIGDFGMARGLCTSPA 214
Query: 493 EGQEGEFALTRHIVGTKGYMAPEYLENGLVSTK-LDVYAFGVLILEMLTGKEAAALHAEE 551
E Q + +T + V T+ Y APE + + T+ +D+++ G + EML ++ L +
Sbjct: 215 EHQ---YFMTEY-VATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQ---LFPGK 267
Query: 552 NNMHLSDVLNAVL-------TKEDGEESLRHFI 577
N +H ++ VL + G E +R +I
Sbjct: 268 NYVHQLQLIMMVLGTPSPAVIQAVGAERVRAYI 300
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 81/164 (49%), Gaps = 20/164 (12%)
Query: 384 KEIALLNKINHSNLIILSGVCFNEG------NCYLVYEYAVNGTLSDWVFSNKNEGKYLD 437
+E+ L+ +NH N+I L V + + Y+V E ++ LS + LD
Sbjct: 72 RELVLMKVVNHKNIIGLLNVFTPQKSLEEFQDVYIVME-LMDANLSQVIQME------LD 124
Query: 438 WKQRIQIALDVATGLNYLHSFTNPPHVHKDINSSNVLLDSDLRAKIANFAMARPAEGQEG 497
++ + + G+ +LHS +H+D+ SN+++ SD KI +F +AR A
Sbjct: 125 HERMSYLLYQMLCGIKHLHSAGI---IHRDLKPSNIVVKSDATLKILDFGLARTAGTS-- 179
Query: 498 EFALTRHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLILEMLTG 541
F +T ++V T+ Y APE + +D+++ G ++ EM+ G
Sbjct: 180 -FMMTPYVV-TRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/165 (24%), Positives = 78/165 (47%), Gaps = 20/165 (12%)
Query: 384 KEIALLNKINHSNLIILSGV-----CFNEGNCYLVYEYAVNGTLSDWVFSNKNEGKYLDW 438
+E+ LL + H N+I L V E N + + + L++ V K ++ +
Sbjct: 77 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF 136
Query: 439 KQRIQIALDVATGLNYLHSFTNPPHVHKDINSSNVLLDSDLRAKIANFAMARPAEGQEGE 498
+ + GL Y+HS +H+D+ SN+ ++ D KI +F +AR +
Sbjct: 137 -----LIYQILRGLKYIHSADI---IHRDLKPSNLAVNEDCELKILDFGLARHTADEMTG 188
Query: 499 FALTRHIVGTKGYMAPEYLENGL-VSTKLDVYAFGVLILEMLTGK 542
+ V T+ Y APE + N + + +D+++ G ++ E+LTG+
Sbjct: 189 Y------VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/166 (25%), Positives = 85/166 (51%), Gaps = 17/166 (10%)
Query: 381 DVSKEIALLNKINHSNLIILSGVCFNEGNCYLVYEYAVNGTLSDWVFSNKNEGKYLDWKQ 440
++ +E+++L ++ H N+I L V N + L+ E G L D++ ++ L ++
Sbjct: 61 EIEREVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKES----LSEEE 116
Query: 441 RIQIALDVATGLNYLHSFTNPPHVHKDINSSNV-LLDSDL---RAKIANFAMARPAEGQE 496
+ G+NYLH+ H D+ N+ LLD ++ K+ +F +A E ++
Sbjct: 117 ATSFIKQILDGVNYLHT---KKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAH--EIED 171
Query: 497 G-EFALTRHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLILEMLTG 541
G EF ++I GT ++APE + + + D+++ GV+ +L+G
Sbjct: 172 GVEF---KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 214
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/164 (31%), Positives = 77/164 (46%), Gaps = 11/164 (6%)
Query: 381 DVSKEIALLNKINHSNLIILSGVCFNEGNC-YLVYEYAVNGTLSDWVFSNKNEGKYLDWK 439
++ KEI + +NH N++ G EGN YL EY G L D + + G
Sbjct: 50 NIKKEIXINKMLNHENVVKFYG-HRREGNIQYLFLEYCSGGELFDRI--EPDIGMPEPDA 106
Query: 440 QRIQIALDVATGLNYLHSFTNPPHVHKDINSSNVLLDSDLRAKIANFAMARPAEGQEGEF 499
QR L G+ YLH H+DI N+LLD KI++F +A E
Sbjct: 107 QRFFHQL--MAGVVYLHGIGI---THRDIKPENLLLDERDNLKISDFGLATVFRYNNRER 161
Query: 500 ALTRHIVGTKGYMAPEYLENG-LVSTKLDVYAFGVLILEMLTGK 542
L + + GT Y+APE L+ + +DV++ G+++ ML G+
Sbjct: 162 LLNK-MXGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 204
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/164 (31%), Positives = 77/164 (46%), Gaps = 11/164 (6%)
Query: 381 DVSKEIALLNKINHSNLIILSGVCFNEGNC-YLVYEYAVNGTLSDWVFSNKNEGKYLDWK 439
++ KEI + +NH N++ G EGN YL EY G L D + + G
Sbjct: 50 NIKKEICINKMLNHENVVKFYG-HRREGNIQYLFLEYCSGGELFDRI--EPDIGMPEPDA 106
Query: 440 QRIQIALDVATGLNYLHSFTNPPHVHKDINSSNVLLDSDLRAKIANFAMARPAEGQEGEF 499
QR L G+ YLH H+DI N+LLD KI++F +A E
Sbjct: 107 QRFFHQL--MAGVVYLHGIGI---THRDIKPENLLLDERDNLKISDFGLATVFRYNNRER 161
Query: 500 ALTRHIVGTKGYMAPEYLENG-LVSTKLDVYAFGVLILEMLTGK 542
L + + GT Y+APE L+ + +DV++ G+++ ML G+
Sbjct: 162 LLNK-MXGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 204
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/164 (31%), Positives = 77/164 (46%), Gaps = 11/164 (6%)
Query: 381 DVSKEIALLNKINHSNLIILSGVCFNEGNC-YLVYEYAVNGTLSDWVFSNKNEGKYLDWK 439
++ KEI + +NH N++ G EGN YL EY G L D + + G
Sbjct: 50 NIKKEICINKMLNHENVVKFYG-HRREGNIQYLFLEYCSGGELFDRI--EPDIGMPEPDA 106
Query: 440 QRIQIALDVATGLNYLHSFTNPPHVHKDINSSNVLLDSDLRAKIANFAMARPAEGQEGEF 499
QR L G+ YLH H+DI N+LLD KI++F +A E
Sbjct: 107 QRFFHQL--MAGVVYLHGIGI---THRDIKPENLLLDERDNLKISDFGLATVFRYNNRER 161
Query: 500 ALTRHIVGTKGYMAPEYLENG-LVSTKLDVYAFGVLILEMLTGK 542
L + + GT Y+APE L+ + +DV++ G+++ ML G+
Sbjct: 162 LLNK-MXGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 204
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/165 (24%), Positives = 78/165 (47%), Gaps = 20/165 (12%)
Query: 384 KEIALLNKINHSNLIILSGV-----CFNEGNCYLVYEYAVNGTLSDWVFSNKNEGKYLDW 438
+E+ LL + H N+I L V E N + + + L++ V K ++ +
Sbjct: 77 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF 136
Query: 439 KQRIQIALDVATGLNYLHSFTNPPHVHKDINSSNVLLDSDLRAKIANFAMARPAEGQEGE 498
+ + GL Y+HS +H+D+ SN+ ++ D KI +F +AR +
Sbjct: 137 -----LIYQILRGLKYIHSADI---IHRDLKPSNLAVNEDCELKILDFGLARHTADEMTG 188
Query: 499 FALTRHIVGTKGYMAPEYLENGL-VSTKLDVYAFGVLILEMLTGK 542
+ V T+ Y APE + N + + +D+++ G ++ E+LTG+
Sbjct: 189 Y------VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/164 (31%), Positives = 77/164 (46%), Gaps = 11/164 (6%)
Query: 381 DVSKEIALLNKINHSNLIILSGVCFNEGNC-YLVYEYAVNGTLSDWVFSNKNEGKYLDWK 439
++ KEI + +NH N++ G EGN YL EY G L D + + G
Sbjct: 51 NIKKEIXINKMLNHENVVKFYG-HRREGNIQYLFLEYCSGGELFDRI--EPDIGMPEPDA 107
Query: 440 QRIQIALDVATGLNYLHSFTNPPHVHKDINSSNVLLDSDLRAKIANFAMARPAEGQEGEF 499
QR L G+ YLH H+DI N+LLD KI++F +A E
Sbjct: 108 QRFFHQL--MAGVVYLHGIGI---THRDIKPENLLLDERDNLKISDFGLATVFRYNNRER 162
Query: 500 ALTRHIVGTKGYMAPEYLENG-LVSTKLDVYAFGVLILEMLTGK 542
L + + GT Y+APE L+ + +DV++ G+++ ML G+
Sbjct: 163 LLNK-MXGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 205
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/165 (24%), Positives = 78/165 (47%), Gaps = 20/165 (12%)
Query: 384 KEIALLNKINHSNLIILSGV-----CFNEGNCYLVYEYAVNGTLSDWVFSNKNEGKYLDW 438
+E+ LL + H N+I L V E N + + + L++ V K ++ +
Sbjct: 90 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF 149
Query: 439 KQRIQIALDVATGLNYLHSFTNPPHVHKDINSSNVLLDSDLRAKIANFAMARPAEGQEGE 498
+ + GL Y+HS +H+D+ SN+ ++ D KI +F +AR + +
Sbjct: 150 -----LIYQILRGLKYIHSADI---IHRDLKPSNLAVNEDCELKILDFGLARHTDDE--- 198
Query: 499 FALTRHIVGTKGYMAPEYLENGL-VSTKLDVYAFGVLILEMLTGK 542
V T+ Y APE + N + + +D+++ G ++ E+LTG+
Sbjct: 199 ---MXGXVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 240
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/227 (24%), Positives = 99/227 (43%), Gaps = 41/227 (18%)
Query: 342 SFKELQSATDNFSFTCRIQ-----GSVYRGKINGGFAAIKKVNGDVSK------------ 384
F ++ A F+ R Q GS +G + F + +N V K
Sbjct: 9 QFYSVEVADSTFTVLKRYQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAK 68
Query: 385 ----EIALLNKINHSNLIILSGVCFNEG------NCYLVYEYAVNGTLSDWVFSNKNEGK 434
E+ LL +NH N+I L V + + YLV E ++ L +
Sbjct: 69 RAYRELVLLKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMEL-MDANLCQVIHME----- 122
Query: 435 YLDWKQRIQIALDVATGLNYLHSFTNPPHVHKDINSSNVLLDSDLRAKIANFAMARPAEG 494
LD ++ + + G+ +LHS +H+D+ SN+++ SD KI +F +AR A
Sbjct: 123 -LDHERMSYLLYQMLCGIKHLHSAGI---IHRDLKPSNIVVKSDCTLKILDFGLARTACT 178
Query: 495 QEGEFALTRHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLILEMLTG 541
F +T ++V T+ Y APE + + +D+++ G ++ E++ G
Sbjct: 179 N---FMMTPYVV-TRYYRAPEVILGMGYAANVDIWSVGCIMGELVKG 221
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/165 (24%), Positives = 79/165 (47%), Gaps = 20/165 (12%)
Query: 384 KEIALLNKINHSNLIILSGV-----CFNEGNCYLVYEYAVNGTLSDWVFSNKNEGKYLDW 438
+E+ LL + H N+I L V E N + + + L++ V K ++ +
Sbjct: 70 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF 129
Query: 439 KQRIQIALDVATGLNYLHSFTNPPHVHKDINSSNVLLDSDLRAKIANFAMARPAEGQEGE 498
+ + GL Y+HS +H+D+ SN+ ++ D KI ++ +AR + +
Sbjct: 130 -----LIYQILRGLKYIHSADI---IHRDLKPSNLAVNEDCELKILDYGLARHTDDEMTG 181
Query: 499 FALTRHIVGTKGYMAPEYLENGL-VSTKLDVYAFGVLILEMLTGK 542
+ V T+ Y APE + N + + +D+++ G ++ E+LTG+
Sbjct: 182 Y------VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/207 (24%), Positives = 84/207 (40%), Gaps = 39/207 (18%)
Query: 365 RGKINGGFAAIKKVNGDVSK------EIALLNKINHSNLIILSGVCFNEGN--------- 409
R ++ + AIKK+ K E+ LL +NH ++ N
Sbjct: 26 RNALDSRYYAIKKIRHTEEKLSTILSEVMLLASLNHQYVVRYYAAWLERRNFVKPMTAVK 85
Query: 410 ----CYLVYEYAVNGTLSDWVFS-NKNEGKYLDWKQRIQIALDVATGLNYLHSFTNPPHV 464
++ EY N TL D + S N N+ + W+ QI L+Y+HS +
Sbjct: 86 KKSTLFIQMEYCENRTLYDLIHSENLNQQRDEYWRLFRQIL----EALSYIHS---QGII 138
Query: 465 HKDINSSNVLLDSDLRAKIANFAMARPAEGQEGEFALTRH-----------IVGTKGYMA 513
H+D+ N+ +D KI +F +A+ L +GT Y+A
Sbjct: 139 HRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAMYVA 198
Query: 514 PEYLE-NGLVSTKLDVYAFGVLILEML 539
E L+ G + K+D+Y+ G++ EM+
Sbjct: 199 TEVLDGTGHYNEKIDMYSLGIIFFEMI 225
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/185 (25%), Positives = 83/185 (44%), Gaps = 15/185 (8%)
Query: 361 GSVYRGKINGGFAAIKKVNGDVSKEIALLNKINHSNLIILSGVCFNEGNCYLVYEYAVNG 420
G Y KI + + + +E + + H N++ L EG YLV++ G
Sbjct: 29 GQEYAAKIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDSISEEGFHYLVFDLVTGG 88
Query: 421 TLSDWVFSNKNEGKYLDWKQRIQIALDVATGLNYLHSFTNPPHVHKDINSSNVLLDSDLR 480
L + + + + + D IQ L+ +N+ H VH+D+ N+LL S +
Sbjct: 89 ELFEDIVAREYYSE-ADASHCIQQILE---SVNHCHLNGI---VHRDLKPENLLLASKSK 141
Query: 481 A---KIANFAMARPAEG-QEGEFALTRHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLIL 536
K+A+F +A +G Q+ F GT GY++PE L +D++A GV++
Sbjct: 142 GAAVKLADFGLAIEVQGDQQAWFGFA----GTPGYLSPEVLRKDPYGKPVDMWACGVILY 197
Query: 537 EMLTG 541
+L G
Sbjct: 198 ILLVG 202
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 81/164 (49%), Gaps = 20/164 (12%)
Query: 384 KEIALLNKINHSNLIILSGVCFNEG------NCYLVYEYAVNGTLSDWVFSNKNEGKYLD 437
+E+ L+ +NH N+I L V + + Y+V E ++ LS + LD
Sbjct: 72 RELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVME-LMDANLSQVIQME------LD 124
Query: 438 WKQRIQIALDVATGLNYLHSFTNPPHVHKDINSSNVLLDSDLRAKIANFAMARPAEGQEG 497
++ + + G+ +LHS +H+D+ SN+++ SD KI +F +AR A
Sbjct: 125 HERMSYLLYQMLCGIKHLHSAGI---IHRDLKPSNIVVKSDCTLKILDFGLARTAGTS-- 179
Query: 498 EFALTRHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLILEMLTG 541
F +T ++V T+ Y APE + +D+++ G ++ EM+ G
Sbjct: 180 -FMMTPYVV-TRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/243 (22%), Positives = 107/243 (44%), Gaps = 37/243 (15%)
Query: 385 EIALLNKI-NHSNLIILSGVCFNEGNCYLVYEYAVNGTLSDWVFSNKNEGKYLDWKQRIQ 443
E+ +++ + H N++ L G C + G ++ EY G L +++ + + + L+
Sbjct: 99 ELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFL---RRKSRVLETDPAFA 155
Query: 444 IALDVATGLNYLHSFTNPPH----------VHKDINSSNVLLDSDLRAKIANFAMARPAE 493
IA A+ + LH + +H+D+ + NVLL + AKI +F +AR
Sbjct: 156 IANSTASTRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIM 215
Query: 494 GQEGEFALTRHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLILEMLTGKEAAALHAEENN 553
+ K +MAPE + + + + + DV+++G+L+ E+ + L N
Sbjct: 216 NDSNYIVKGNARLPVK-WMAPESIFDCVYTVQSDVWSYGILLWEIFS----LGL-----N 265
Query: 554 MHLSDVLNAVLTK--EDGEESLRHFIDPTLQGNYPLELALLVIRLIDACLKKDPTDRPTM 611
+ ++N+ K +DG + + P + ++ AC +PT RPT
Sbjct: 266 PYPGILVNSKFYKLVKDGYQMAQPAFAPK-----------NIYSIMQACWALEPTHRPTF 314
Query: 612 YEI 614
+I
Sbjct: 315 QQI 317
>pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1
Length = 361
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/190 (25%), Positives = 85/190 (44%), Gaps = 20/190 (10%)
Query: 361 GSVYRGKINGGFAAIK------KVNGDVSKEIALLNKINHSNLIILSGVCFNEGNCYLVY 414
+ R K + A+K K++ +V +EI + H N++ V + +V
Sbjct: 34 ARLMRDKQSNELVAVKYIERGEKIDENVKREIINHRSLRHPNIVRFKEVILTPTHLAIVM 93
Query: 415 EYAVNGTLSDWVFSNKNEGKYLDWKQRIQIALDVATGLNYLHSFTNPPHVHKDINSSNVL 474
EYA G L + + N G++ + + R + +G++Y H+ H+D+ N L
Sbjct: 94 EYASGGELFERIC---NAGRFSEDEARFFFQ-QLISGVSYCHAMQV---CHRDLKLENTL 146
Query: 475 LDSD--LRAKIANFAMARPAEGQEGEFALTRHIVGTKGYMAPEYLENGLVSTKL-DVYAF 531
LD R KI +F ++ + + + VGT Y+APE L K+ DV++
Sbjct: 147 LDGSPAPRLKICDFGYSKSSVLH----SQPKSTVGTPAYIAPEVLLKKEYDGKVADVWSC 202
Query: 532 GVLILEMLTG 541
GV + ML G
Sbjct: 203 GVTLYVMLVG 212
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/165 (24%), Positives = 78/165 (47%), Gaps = 20/165 (12%)
Query: 384 KEIALLNKINHSNLIILSGV-----CFNEGNCYLVYEYAVNGTLSDWVFSNKNEGKYLDW 438
+E+ LL + H N+I L V E N + + + L++ V K ++ +
Sbjct: 70 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF 129
Query: 439 KQRIQIALDVATGLNYLHSFTNPPHVHKDINSSNVLLDSDLRAKIANFAMARPAEGQEGE 498
+ + GL Y+HS +H+D+ SN+ ++ D KI +F +AR + +
Sbjct: 130 -----LIYQILRGLKYIHSADI---IHRDLKPSNLAVNEDCELKILDFGLARHTDDE--- 178
Query: 499 FALTRHIVGTKGYMAPEYLENGL-VSTKLDVYAFGVLILEMLTGK 542
V T+ Y APE + N + + +D+++ G ++ E+LTG+
Sbjct: 179 ---MTGXVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/190 (26%), Positives = 92/190 (48%), Gaps = 28/190 (14%)
Query: 367 KINGGFAAIKKVNGDVS---------KEIALLNKINHSNLIILSGVCFNEGNCYLVYEYA 417
K +G AIKK++ +E+ LL + H N+I L V + Y++
Sbjct: 64 KRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFYDFY 123
Query: 418 VNGTLSDWVFSNKNEGKYLDWK---QRIQ-IALDVATGLNYLHSFTNPPHVHKDINSSNV 473
+ F + K + + ++IQ + + GL Y+HS VH+D+ N+
Sbjct: 124 LVMP-----FMQTDLQKIMGMEFSEEKIQYLVYQMLKGLKYIHSAGV---VHRDLKPGNL 175
Query: 474 LLDSDLRAKIANFAMARPAEGQEGEFALTRHIVGTKGYMAPEYLENGL-VSTKLDVYAFG 532
++ D KI +F +AR A+ + +T ++V T+ Y APE + + + + +D+++ G
Sbjct: 176 AVNEDCELKILDFGLARHADAE-----MTGYVV-TRWYRAPEVILSWMHYNQTVDIWSVG 229
Query: 533 VLILEMLTGK 542
++ EMLTGK
Sbjct: 230 CIMAEMLTGK 239
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 81/164 (49%), Gaps = 20/164 (12%)
Query: 384 KEIALLNKINHSNLIILSGVCFNEG------NCYLVYEYAVNGTLSDWVFSNKNEGKYLD 437
+E+ L+ +NH N+I L V + + Y+V E ++ LS + LD
Sbjct: 72 RELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVME-LMDANLSQVIQME------LD 124
Query: 438 WKQRIQIALDVATGLNYLHSFTNPPHVHKDINSSNVLLDSDLRAKIANFAMARPAEGQEG 497
++ + + G+ +LHS +H+D+ SN+++ SD KI +F +AR A
Sbjct: 125 HERMSYLLYQMLCGIKHLHSAGI---IHRDLKPSNIVVKSDATLKILDFGLARTAGTS-- 179
Query: 498 EFALTRHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLILEMLTG 541
F +T ++V T+ Y APE + +D+++ G ++ EM+ G
Sbjct: 180 -FMMTPYVV-TRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 56/236 (23%), Positives = 101/236 (42%), Gaps = 40/236 (16%)
Query: 393 NHSNLIILSGVCFNEGNCYLVYEYAVNGTL------------SDWVFSNKNEGKYLDWKQ 440
H N++ L G C + G ++ EY G L +D F+ N L +
Sbjct: 108 QHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANST--LSTRD 165
Query: 441 RIQIALDVATGLNYLHSFTNPPHVHKDINSSNVLLDSDLRAKIANFAMARPAEGQEGEFA 500
+ + VA G+ +L S +H+D+ + NVLL + AKI +F +AR
Sbjct: 166 LLHFSSQVAQGMAFLASKNC---IHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIV 222
Query: 501 LTRHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLILEMLTGKEAAALHAEENNMHLSDVL 560
+ K +MAPE + + + + + DV+++G+L+ E+ + L N + ++
Sbjct: 223 KGNARLPVK-WMAPESIFDCVYTVQSDVWSYGILLWEIFS----LGL-----NPYPGILV 272
Query: 561 NAVLTK--EDGEESLRHFIDPTLQGNYPLELALLVIRLIDACLKKDPTDRPTMYEI 614
N+ K +DG + + P + ++ AC +PT RPT +I
Sbjct: 273 NSKFYKLVKDGYQMAQPAFAPK-----------NIYSIMQACWALEPTHRPTFQQI 317
>pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6
pdb|3UC4|B Chain B, The Crystal Structure Of Snf1-Related Kinase 2.6
Length = 362
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 49/190 (25%), Positives = 84/190 (44%), Gaps = 20/190 (10%)
Query: 361 GSVYRGKINGGFAAIK------KVNGDVSKEIALLNKINHSNLIILSGVCFNEGNCYLVY 414
+ R K + A+K K+ +V +EI + H N++ V + +V
Sbjct: 35 ARLMRDKQSNELVAVKYIERGEKIAANVKREIINHRSLRHPNIVRFKEVILTPTHLAIVM 94
Query: 415 EYAVNGTLSDWVFSNKNEGKYLDWKQRIQIALDVATGLNYLHSFTNPPHVHKDINSSNVL 474
EYA G L + + N G++ + + R + +G++Y H+ H+D+ N L
Sbjct: 95 EYASGGELFERIC---NAGRFSEDEARFFFQ-QLISGVSYCHAMQV---CHRDLKLENTL 147
Query: 475 LDSD--LRAKIANFAMARPAEGQEGEFALTRHIVGTKGYMAPEYLENGLVSTKL-DVYAF 531
LD R KI +F ++ + + + VGT Y+APE L K+ DV++
Sbjct: 148 LDGSPAPRLKICDFGYSKSSVLH----SQPKSTVGTPAYIAPEVLLKKEYDGKVADVWSC 203
Query: 532 GVLILEMLTG 541
GV + ML G
Sbjct: 204 GVTLYVMLVG 213
>pdb|3RGF|A Chain A, Crystal Structure Of Human Cdk8CYCC
Length = 405
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 49/189 (25%), Positives = 87/189 (46%), Gaps = 27/189 (14%)
Query: 374 AIKKVNG-----DVSKEIALLNKINHSNLIILSGVCFNEGN--CYLVYEYAVNGTLSDWV 426
A+K++ G +EIALL ++ H N+I L V + + +L+++YA +
Sbjct: 52 ALKQIEGTGISMSACREIALLRELKHPNVISLQKVFLSHADRKVWLLFDYAEHDLWHIIK 111
Query: 427 FSNKNEGKYLDWKQRIQIA--------LDVATGLNYLHSFTNPPHVHKDINSSNVLLDSD 478
F ++ K+ +Q+ + G++YLH+ +H+D+ +N+L+ +
Sbjct: 112 FHRASKAN----KKPVQLPRGMVKSLLYQILDGIHYLHANWV---LHRDLKPANILVMGE 164
Query: 479 ----LRAKIANFAMARPAEGQEGEFALTRHIVGTKGYMAPEYLENGLVSTK-LDVYAFGV 533
R KIA+ AR A +V T Y APE L TK +D++A G
Sbjct: 165 GPERGRVKIADMGFARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGC 224
Query: 534 LILEMLTGK 542
+ E+LT +
Sbjct: 225 IFAELLTSE 233
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/185 (25%), Positives = 83/185 (44%), Gaps = 15/185 (8%)
Query: 361 GSVYRGKINGGFAAIKKVNGDVSKEIALLNKINHSNLIILSGVCFNEGNCYLVYEYAVNG 420
G Y KI + + + +E + + H N++ L EG YLV++ G
Sbjct: 29 GQEYAAKIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDSISEEGFHYLVFDLVTGG 88
Query: 421 TLSDWVFSNKNEGKYLDWKQRIQIALDVATGLNYLHSFTNPPHVHKDINSSNVLLDSDLR 480
L + + + + + D IQ L+ +N+ H VH+D+ N+LL S +
Sbjct: 89 ELFEDIVAREYYSE-ADASHCIQQILE---SVNHCHLNGI---VHRDLKPENLLLASKSK 141
Query: 481 A---KIANFAMARPAEG-QEGEFALTRHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLIL 536
K+A+F +A +G Q+ F GT GY++PE L +D++A GV++
Sbjct: 142 GAAVKLADFGLAIEVQGDQQAWFGFA----GTPGYLSPEVLRKDPYGKPVDMWACGVILY 197
Query: 537 EMLTG 541
+L G
Sbjct: 198 ILLVG 202
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 51/164 (31%), Positives = 77/164 (46%), Gaps = 11/164 (6%)
Query: 381 DVSKEIALLNKINHSNLIILSGVCFNEGNC-YLVYEYAVNGTLSDWVFSNKNEGKYLDWK 439
++ KEI + +NH N++ G EGN YL EY G L D + + G
Sbjct: 51 NIKKEICINAMLNHENVVKFYG-HRREGNIQYLFLEYCSGGELFDRI--EPDIGMPEPDA 107
Query: 440 QRIQIALDVATGLNYLHSFTNPPHVHKDINSSNVLLDSDLRAKIANFAMARPAEGQEGEF 499
QR L G+ YLH H+DI N+LLD KI++F +A E
Sbjct: 108 QRFFHQL--MAGVVYLHGIGI---THRDIKPENLLLDERDNLKISDFGLATVFRYNNRER 162
Query: 500 ALTRHIVGTKGYMAPEYLENG-LVSTKLDVYAFGVLILEMLTGK 542
L + + GT Y+APE L+ + +DV++ G+++ ML G+
Sbjct: 163 LLNK-MCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 205
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 46/172 (26%), Positives = 75/172 (43%), Gaps = 15/172 (8%)
Query: 375 IKKVNGDVSKEIALLNKI-NHSNLIILSGVCFNEGNCYLVYEYAVNGTLSDWVFSNKNEG 433
I K D ++EI +L + H N+I L V + Y+V E G L D + K
Sbjct: 55 IDKSKRDPTEEIEILLRYGQHPNIITLKDVYDDGKYVYVVTELMKGGELLDKILRQK--- 111
Query: 434 KYLDWKQRIQIALDVATGLNYLHSFTNPPHVHKDINSSNVLLDSDL----RAKIANFAMA 489
+ ++ + + + YLH+ VH+D+ SN+L + +I +F A
Sbjct: 112 -FFSEREASAVLFTITKTVEYLHAQGV---VHRDLKPSNILYVDESGNPESIRICDFGFA 167
Query: 490 RPAEGQEGEFALTRHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLILEMLTG 541
+ + G L T ++APE LE D+++ GVL+ MLTG
Sbjct: 168 KQLRAENG---LLMTPCYTANFVAPEVLERQGYDAACDIWSLGVLLYTMLTG 216
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 87/200 (43%), Gaps = 34/200 (17%)
Query: 361 GSVYRG---------KINGGFAAIK-----KVNGDVSKEIALLNKINHSNLIILSGVCFN 406
G+VY+G KI ++ K N ++ E ++ + + L G+C
Sbjct: 31 GTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAYVMAGVGSPYVSRLLGICLT 90
Query: 407 EGNCYLVYEYAVNGTLSDWVFSNKNE---GKYLDWKQRIQIALDVATGLNYLHSFTNPPH 463
LV + G L D V N+ L+W + +A G++YL
Sbjct: 91 -STVQLVTQLMPYGCLLDHVRENRGRLGSQDLLNW------CMQIAKGMSYLEDVR---L 140
Query: 464 VHKDINSSNVLLDSDLRAKIANFAMARPAEGQEGEFALTRHIVGTK---GYMAPEYLENG 520
VH+D+ + NVL+ S KI +F +AR + E E+ H G K +MA E +
Sbjct: 141 VHRDLAARNVLVKSPNHVKITDFGLARLLDIDETEY----HADGGKVPIKWMALESILRR 196
Query: 521 LVSTKLDVYAFGVLILEMLT 540
+ + DV+++GV + E++T
Sbjct: 197 RFTHQSDVWSYGVTVWELMT 216
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 80/165 (48%), Gaps = 20/165 (12%)
Query: 384 KEIALLNKINHSNLIILSGVCFNEG------NCYLVYEYAVNGTLSDWVFSNKNEGKYLD 437
+E+ L+ +NH N+I L V + + YLV E ++ L + LD
Sbjct: 72 RELVLMKXVNHKNIISLLNVFTPQKTLEEFQDVYLVME-LMDANLXQVIQME------LD 124
Query: 438 WKQRIQIALDVATGLNYLHSFTNPPHVHKDINSSNVLLDSDLRAKIANFAMARPAEGQEG 497
++ + + G+ +LHS +H+D+ SN+++ SD KI +F +AR A
Sbjct: 125 HERMSYLLYQMLXGIKHLHSAGI---IHRDLKPSNIVVKSDXTLKILDFGLARTA---GT 178
Query: 498 EFALTRHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLILEMLTGK 542
F +T ++V T+ Y APE + +D+++ G ++ EM+ K
Sbjct: 179 SFMMTPYVV-TRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHK 222
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 69/163 (42%), Gaps = 27/163 (16%)
Query: 448 VATGLNYLHSFTNPPHVHKDINSSNVLLDSDLRAKIANFAMARPAEGQEGEFALTRHIVG 507
+ +GL +LH +++D+ NVLLD D +I++ +A E + G+ T+ G
Sbjct: 298 IVSGLEHLHQRNI---IYRDLKPENVLLDDDGNVRISDLGLA--VELKAGQ-TKTKGYAG 351
Query: 508 TKGYMAPEYLENGLVSTKLDVYAFGVLILEMLTGKEAAALHAE--ENNMHLSDVLNAVLT 565
T G+MAPE L +D +A GV + EM+ + E EN VL +T
Sbjct: 352 TPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRVLEQAVT 411
Query: 566 KEDGEESLRHFIDPTLQGNYPLELALLVIRLIDACLKKDPTDR 608
YP + + +A L+KDP R
Sbjct: 412 -------------------YPDKFSPASKDFCEALLQKDPEKR 435
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 69/163 (42%), Gaps = 27/163 (16%)
Query: 448 VATGLNYLHSFTNPPHVHKDINSSNVLLDSDLRAKIANFAMARPAEGQEGEFALTRHIVG 507
+ +GL +LH +++D+ NVLLD D +I++ +A E + G+ T+ G
Sbjct: 298 IVSGLEHLHQRNI---IYRDLKPENVLLDDDGNVRISDLGLA--VELKAGQ-TKTKGYAG 351
Query: 508 TKGYMAPEYLENGLVSTKLDVYAFGVLILEMLTGKEAAALHAE--ENNMHLSDVLNAVLT 565
T G+MAPE L +D +A GV + EM+ + E EN VL +T
Sbjct: 352 TPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRVLEQAVT 411
Query: 566 KEDGEESLRHFIDPTLQGNYPLELALLVIRLIDACLKKDPTDR 608
YP + + +A L+KDP R
Sbjct: 412 -------------------YPDKFSPASKDFCEALLQKDPEKR 435
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 68/273 (24%), Positives = 114/273 (41%), Gaps = 47/273 (17%)
Query: 338 LKVYSFKELQSATDNFSFTCRIQGSVY------RGKINGGFAAIKKVNG--DVS------ 383
LK SF D + I Y R ++ G AIKK+ DV
Sbjct: 41 LKARSFDVTFDVGDEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRT 100
Query: 384 -KEIALLNKINHSNLIILSG-----VCFNEGNCYLVYEYAVNGTLSDWVFSNKNEGKYLD 437
+E+ +L H N+I + V + E V + L + S++ L
Sbjct: 101 LRELKILKHFKHDNIIAIKDILRPTVPYGEFKSVYVVLDLMESDLHQIIHSSQP----LT 156
Query: 438 WKQRIQIALDVATGLNYLHSFTNPPHVHKDINSSNVLLDSDLRAKIANFAMAR-----PA 492
+ + GL Y+HS +H+D+ SN+L++ + KI +F MAR PA
Sbjct: 157 LEHVRYFLYQLLRGLKYMHSAQV---IHRDLKPSNLLVNENCELKIGDFGMARGLCTSPA 213
Query: 493 EGQEGEFALTRHIVGTKGYMAPEYLENGLVSTK-LDVYAFGVLILEMLTGKEAAALHAEE 551
E Q + +T + V T+ Y APE + + T+ +D+++ G + EML ++ L +
Sbjct: 214 EHQ---YFMTEY-VATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQ---LFPGK 266
Query: 552 NNMHLSDVLNAVL-------TKEDGEESLRHFI 577
N +H ++ VL + G E +R +I
Sbjct: 267 NYVHQLQLIMMVLGTPSPAVIQAVGAERVRAYI 299
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 69/163 (42%), Gaps = 27/163 (16%)
Query: 448 VATGLNYLHSFTNPPHVHKDINSSNVLLDSDLRAKIANFAMARPAEGQEGEFALTRHIVG 507
+ +GL +LH +++D+ NVLLD D +I++ +A E + G+ T+ G
Sbjct: 298 IVSGLEHLHQRNI---IYRDLKPENVLLDDDGNVRISDLGLA--VELKAGQ-TKTKGYAG 351
Query: 508 TKGYMAPEYLENGLVSTKLDVYAFGVLILEMLTGKEAAALHAE--ENNMHLSDVLNAVLT 565
T G+MAPE L +D +A GV + EM+ + E EN VL +T
Sbjct: 352 TPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRVLEQAVT 411
Query: 566 KEDGEESLRHFIDPTLQGNYPLELALLVIRLIDACLKKDPTDR 608
YP + + +A L+KDP R
Sbjct: 412 -------------------YPDKFSPASKDFCEALLQKDPEKR 435
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 69/163 (42%), Gaps = 27/163 (16%)
Query: 448 VATGLNYLHSFTNPPHVHKDINSSNVLLDSDLRAKIANFAMARPAEGQEGEFALTRHIVG 507
+ +GL +LH +++D+ NVLLD D +I++ +A E + G+ T+ G
Sbjct: 298 IVSGLEHLHQRNI---IYRDLKPENVLLDDDGNVRISDLGLA--VELKAGQ-TKTKGYAG 351
Query: 508 TKGYMAPEYLENGLVSTKLDVYAFGVLILEMLTGKEAAALHAE--ENNMHLSDVLNAVLT 565
T G+MAPE L +D +A GV + EM+ + E EN VL +T
Sbjct: 352 TPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRVLEQAVT 411
Query: 566 KEDGEESLRHFIDPTLQGNYPLELALLVIRLIDACLKKDPTDR 608
YP + + +A L+KDP R
Sbjct: 412 -------------------YPDKFSPASKDFCEALLQKDPEKR 435
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 91/211 (43%), Gaps = 27/211 (12%)
Query: 361 GSVYRG--KINGGFAAIKKVNG-------DVSKEIALLNKINHSNLIILSGVCFNEGNCY 411
G VY+ K AA K ++ D EI +L +H N++ L + E N +
Sbjct: 24 GKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLW 83
Query: 412 LVYEYAVNGTLSDWVFSNKNEGKYLDWKQRIQIAL-DVATGLNYLHSFTNPPHVHKDINS 470
++ E+ G + + + + +IQ+ LNYLH + +H+D+ +
Sbjct: 84 ILIEFCAGGAVDAVMLELERPLT----ESQIQVVCKQTLDALNYLH---DNKIIHRDLKA 136
Query: 471 SNVLLDSDLRAKIANFAMARPAEGQEGEFALTRHIVGTKGYMAPEYL-----ENGLVSTK 525
N+L D K+A+F ++ A+ +GT +MAPE + ++ K
Sbjct: 137 GNILFTLDGDIKLADFGVS--AKNTRTXIQRRDSFIGTPYWMAPEVVMCETSKDRPYDYK 194
Query: 526 LDVYAFGVLILEMLTGKEAAALHAEENNMHL 556
DV++ G+ ++EM E H E N M +
Sbjct: 195 ADVWSLGITLIEM---AEIEPPHHELNPMRV 222
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 40/183 (21%), Positives = 81/183 (44%), Gaps = 18/183 (9%)
Query: 368 INGGFAAIKKVNGD--------VSKEIALLNKINHSNLIILSGVCFNEGNCYLVYEYAVN 419
+ G AIK ++ + + EI L + H ++ L V ++V EY
Sbjct: 33 LTGEMVAIKIMDKNTLGSDLPRIKTEIEALKNLRHQHICQLYHVLETANKIFMVLEYCPG 92
Query: 420 GTLSDWVFSNKNEGKYLDWKQRIQIALDVATGLNYLHSFTNPPHVHKDINSSNVLLDSDL 479
G L D++ S L ++ + + + + Y+HS + H+D+ N+L D
Sbjct: 93 GELFDYIISQDR----LSEEETRVVFRQIVSAVAYVHS---QGYAHRDLKPENLLFDEYH 145
Query: 480 RAKIANFAMARPAEGQEGEFALTRHIVGTKGYMAPEYLE-NGLVSTKLDVYAFGVLILEM 538
+ K+ +F + +G + T G+ Y APE ++ + ++ DV++ G+L+ +
Sbjct: 146 KLKLIDFGLCAKPKGNKDYHLQT--CCGSLAYAAPELIQGKSYLGSEADVWSMGILLYVL 203
Query: 539 LTG 541
+ G
Sbjct: 204 MCG 206
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 76/163 (46%), Gaps = 11/163 (6%)
Query: 378 VNGDVSKEIALLNKINHSNLIILSGVCFNEGNCYLVYEYAVNGTLSDWVFSNKNEGKYLD 437
+N +EI LL +++H N+I L ++ N LV+++ +D K+ L
Sbjct: 55 INRTALREIKLLQELSHPNIIGLLDAFGHKSNISLVFDFME----TDLEVIIKDNSLVLT 110
Query: 438 WKQRIQIALDVATGLNYLHSFTNPPHVHKDINSSNVLLDSDLRAKIANFAMARPAEGQEG 497
L GL YLH +H+D+ +N+LLD + K+A+F +A+
Sbjct: 111 PSHIKAYMLMTLQGLEYLHQHWI---LHRDLKPNNLLLDENGVLKLADFGLAKSFGSPNR 167
Query: 498 EFALTRHIVGTKGYMAPEYLENG-LVSTKLDVYAFGVLILEML 539
+ H V T+ Y APE L + +D++A G ++ E+L
Sbjct: 168 AYX---HQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELL 207
>pdb|3ZUT|A Chain A, The Structure Of Ost1 (D160a) Kinase
pdb|3ZUT|B Chain B, The Structure Of Ost1 (D160a) Kinase
Length = 362
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 49/190 (25%), Positives = 84/190 (44%), Gaps = 20/190 (10%)
Query: 361 GSVYRGKINGGFAAIK------KVNGDVSKEIALLNKINHSNLIILSGVCFNEGNCYLVY 414
+ R K + A+K K++ +V +EI + H N++ V + +V
Sbjct: 35 ARLMRDKQSNELVAVKYIERGEKIDENVKREIINHRSLRHPNIVRFKEVILTPTHLAIVM 94
Query: 415 EYAVNGTLSDWVFSNKNEGKYLDWKQRIQIALDVATGLNYLHSFTNPPHVHKDINSSNVL 474
EYA G L + + N G++ + + R + +G++Y H+ H+D+ N L
Sbjct: 95 EYASGGELFERIC---NAGRFSEDEARF-FFQQLISGVSYCHAMQV---CHRDLKLENTL 147
Query: 475 LDSD--LRAKIANFAMARPAEGQEGEFALTRHIVGTKGYMAPEYLENGLVSTKL-DVYAF 531
LD R KI F ++ + + + VGT Y+APE L K+ DV++
Sbjct: 148 LDGSPAPRLKICAFGYSKSSVLH----SQPKSTVGTPAYIAPEVLLKKEYDGKVADVWSC 203
Query: 532 GVLILEMLTG 541
GV + ML G
Sbjct: 204 GVTLYVMLVG 213
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 80/165 (48%), Gaps = 20/165 (12%)
Query: 384 KEIALLNKINHSNLIILSGVCFNEG------NCYLVYEYAVNGTLSDWVFSNKNEGKYLD 437
+E+ L+ +NH N+I L V + + YLV E ++ L + LD
Sbjct: 72 RELVLMKXVNHKNIISLLNVFTPQKTLEEFQDVYLVME-LMDANLXQVIQME------LD 124
Query: 438 WKQRIQIALDVATGLNYLHSFTNPPHVHKDINSSNVLLDSDLRAKIANFAMARPAEGQEG 497
++ + + G+ +LHS +H+D+ SN+++ SD KI +F +AR A
Sbjct: 125 HERMSYLLYQMLCGIKHLHSAGI---IHRDLKPSNIVVKSDXTLKILDFGLARTA---GT 178
Query: 498 EFALTRHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLILEMLTGK 542
F +T ++V T+ Y APE + +D+++ G ++ EM+ K
Sbjct: 179 SFMMTPYVV-TRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHK 222
>pdb|4EBY|A Chain A, Crystal Structure Of The Ectodomain Of A Receptor Like
Kinase
pdb|4EBZ|A Chain A, Crystal Structure Of The Ectodomain Of A Receptor Like
Kinase
Length = 212
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 64/111 (57%), Gaps = 4/111 (3%)
Query: 103 VIVPVNCSCS-GQYYQSNTTYTIQNGDTYLFIANNTFQGLSTCQALEDQNGSP-TNLIIG 160
V+VP C C G + N +Y+++ DTY +A + + L+T ++L+ +N P TN+ +
Sbjct: 61 VLVPFPCECQPGDFLGHNFSYSVRQEDTYERVAISNYANLTTMESLQARNPFPATNIPLS 120
Query: 161 AGVTVPLRCACPTENQTDEGFPFLLSYLVAEGDTVSGISSRFGVDTGEILQ 211
A + V + C+C E+ + + F ++Y + D++S I+ GV + +ILQ
Sbjct: 121 ATLNVLVNCSCGDESVSKD-FGLFVTYPLRPEDSLSSIARSSGV-SADILQ 169
>pdb|3ZUU|A Chain A, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
pdb|3ZUU|B Chain B, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
Length = 362
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 49/190 (25%), Positives = 84/190 (44%), Gaps = 20/190 (10%)
Query: 361 GSVYRGKINGGFAAIK------KVNGDVSKEIALLNKINHSNLIILSGVCFNEGNCYLVY 414
+ R K + A+K K++ +V +EI + H N++ V + +V
Sbjct: 35 ARLMRDKQSNELVAVKYIERGEKIDENVKREIINHRSLRHPNIVRFKEVILTPTHLAIVM 94
Query: 415 EYAVNGTLSDWVFSNKNEGKYLDWKQRIQIALDVATGLNYLHSFTNPPHVHKDINSSNVL 474
EYA G L + + N G++ + + R + +G++Y H+ H+D+ N L
Sbjct: 95 EYASGGELFERIC---NAGRFSEDEARF-FFQQLISGVSYCHAMQV---CHRDLKLENTL 147
Query: 475 LDSD--LRAKIANFAMARPAEGQEGEFALTRHIVGTKGYMAPEYLENGLVSTKL-DVYAF 531
LD R KI F ++ + + + VGT Y+APE L K+ DV++
Sbjct: 148 LDGSPAPRLKICAFGYSKSSVLH----SQPKDTVGTPAYIAPEVLLKKEYDGKVADVWSC 203
Query: 532 GVLILEMLTG 541
GV + ML G
Sbjct: 204 GVTLYVMLVG 213
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 52/196 (26%), Positives = 96/196 (48%), Gaps = 23/196 (11%)
Query: 361 GSVYRGKI--NGGFAAIKKVNGDV---SKEIALLNKINHSNLIILSGVCFNEGNCY-LVY 414
G VY+ K+ +G AIKKV D ++E+ ++ K++H N++ L ++ G +VY
Sbjct: 34 GVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDVVY 93
Query: 415 EYAVNGTLSDWVFSNKNEGKYLDWKQRIQI------ALDVATGLNYLHSFTNPPHVHKDI 468
V + + V+ + Y KQ + + + L Y+HSF H+DI
Sbjct: 94 LNLVLDYVPETVY--RVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGI---CHRDI 148
Query: 469 NSSNVLLDSDLRA-KIANFAMARPAEGQEGEFALTRHIVGTKGYMAPEYLENGL-VSTKL 526
N+LLD D K+ +F A+ + GE ++ + ++ Y APE + ++ +
Sbjct: 149 KPQNLLLDPDTAVLKLCDFGSAK--QLVRGEPNVS--XICSRYYRAPELIFGATDYTSSI 204
Query: 527 DVYAFGVLILEMLTGK 542
DV++ G ++ E+L G+
Sbjct: 205 DVWSAGCVLAELLLGQ 220
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 80/165 (48%), Gaps = 20/165 (12%)
Query: 384 KEIALLNKINHSNLIILSGVCFNEG------NCYLVYEYAVNGTLSDWVFSNKNEGKYLD 437
+E+ L+ +NH N+I L V + + YLV E ++ L + LD
Sbjct: 110 RELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMEL-MDANLCQVIQME------LD 162
Query: 438 WKQRIQIALDVATGLNYLHSFTNPPHVHKDINSSNVLLDSDLRAKIANFAMARPAEGQEG 497
++ + + G+ +LHS +H+D+ SN+++ SD KI +F +AR A
Sbjct: 163 HERMSYLLYQMLCGIKHLHSAGI---IHRDLKPSNIVVKSDCTLKILDFGLARTA---GT 216
Query: 498 EFALTRHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLILEMLTGK 542
F +T ++V T+ Y APE + +D+++ G ++ EM+ K
Sbjct: 217 SFMMTPYVV-TRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHK 260
>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|F Chain F, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 305
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 53/169 (31%), Positives = 75/169 (44%), Gaps = 19/169 (11%)
Query: 381 DVSKEIALLNKINHSNLIILSGVCFNE--GNCYLVYEYAVNGTLSDWVFSNKNEGKYLDW 438
+V KEI LL ++ H N+I L V +NE Y+V EY V G + K
Sbjct: 52 NVKKEIQLLRRLRHKNVIQLVDVLYNEEKQKMYMVMEYCVCGMQE---MLDSVPEKRFPV 108
Query: 439 KQRIQIALDVATGLNYLHSFTNPPHVHKDINSSNVLLDSDLRAKIANFAMARPAEGQEGE 498
Q + GL YLHS VHKDI N+LL + KI+ +A
Sbjct: 109 CQAHGYFCQLIDGLEYLHSQGI---VHKDIKPGNLLLTTGGTLKISALGVAEALH----P 161
Query: 499 FAL---TRHIVGTKGYMAPEYLENGLVS---TKLDVYAFGVLILEMLTG 541
FA R G+ + PE + NGL + K+D+++ GV + + TG
Sbjct: 162 FAADDTCRTSQGSPAFQPPE-IANGLDTFSGFKVDIWSAGVTLYNITTG 209
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 51/98 (52%), Gaps = 7/98 (7%)
Query: 445 ALDVATGLNYLHSFTNPPHVHKDINSSNVLLDSDLRAKIANFAMARPAEGQEGEFALTRH 504
A ++ GL LH V++D+ N+LLD +I++ +A EG+ R
Sbjct: 292 AAEICCGLEDLHRERI---VYRDLKPENILLDDHGHIRISDLGLA--VHVPEGQTIKGR- 345
Query: 505 IVGTKGYMAPEYLENGLVSTKLDVYAFGVLILEMLTGK 542
VGT GYMAPE ++N + D +A G L+ EM+ G+
Sbjct: 346 -VGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQ 382
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 80/165 (48%), Gaps = 20/165 (12%)
Query: 384 KEIALLNKINHSNLIILSGVCFNEG------NCYLVYEYAVNGTLSDWVFSNKNEGKYLD 437
+E+ L+ +NH N+I L V + + YLV E ++ L + LD
Sbjct: 72 RELVLMKXVNHKNIISLLNVFTPQKTLEEFQDVYLVME-LMDANLCQVIQME------LD 124
Query: 438 WKQRIQIALDVATGLNYLHSFTNPPHVHKDINSSNVLLDSDLRAKIANFAMARPAEGQEG 497
++ + + G+ +LHS +H+D+ SN+++ SD KI +F +AR A
Sbjct: 125 HERMSYLLYQMLCGIKHLHSAGI---IHRDLKPSNIVVKSDXTLKILDFGLARTA---GT 178
Query: 498 EFALTRHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLILEMLTGK 542
F +T ++V T+ Y APE + +D+++ G ++ EM+ K
Sbjct: 179 SFMMTPYVV-TRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHK 222
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 46/186 (24%), Positives = 82/186 (44%), Gaps = 32/186 (17%)
Query: 442 IQIALDVATGLNYLHSFTNPPHVHKDINSSNVLLDSDLRAKIANFAMAR-----PAEGQE 496
I + VA G+ +L S +H+D+ + N+LL + KI +F +AR P ++
Sbjct: 202 ISYSFQVARGMEFLSSRKC---IHRDLAARNILLSENNVVKICDFGLARDIYKNPDYVRK 258
Query: 497 GEFALTRHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLILEMLTGKEAAALHAEENNMHL 556
G+ L +MAPE + + + STK DV+++GVL+ E+ + +
Sbjct: 259 GDTRLPLK------WMAPESIFDKIYSTKSDVWSYGVLLWEIFSLGGSP----------- 301
Query: 557 SDVLNAVLTKEDGEESLRHFIDPTLQGNYPLELALLVIRLIDACLKKDPTDRPTMYEIEH 616
V ED LR ++ P + +++ C +DP +RP E+
Sbjct: 302 ---YPGVQMDEDFCSRLRE----GMRMRAPEYSTPEIYQIMLDCWHRDPKERPRFAELVE 354
Query: 617 SLSNIL 622
L ++L
Sbjct: 355 KLGDLL 360
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 80/165 (48%), Gaps = 20/165 (12%)
Query: 384 KEIALLNKINHSNLIILSGVCFNEG------NCYLVYEYAVNGTLSDWVFSNKNEGKYLD 437
+E+ L+ +NH N+I L V + + YLV E ++ L + LD
Sbjct: 110 RELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVME-LMDANLCQVIQME------LD 162
Query: 438 WKQRIQIALDVATGLNYLHSFTNPPHVHKDINSSNVLLDSDLRAKIANFAMARPAEGQEG 497
++ + + G+ +LHS +H+D+ SN+++ SD KI +F +AR A
Sbjct: 163 HERMSYLLYQMLCGIKHLHSAGI---IHRDLKPSNIVVKSDCTLKILDFGLARTA---GT 216
Query: 498 EFALTRHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLILEMLTGK 542
F +T ++V T+ Y APE + +D+++ G ++ EM+ K
Sbjct: 217 SFMMTPYVV-TRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHK 260
>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia
pdb|3GC0|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia In
Complex With Amp
Length = 329
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 87/202 (43%), Gaps = 40/202 (19%)
Query: 361 GSVYRG--KINGGFAAIKKVN---------GDVSKEIALLNKINHSNLIILSGVCFNEGN 409
G VY+ + AIK++ G +E++LL ++ H N+I L V +
Sbjct: 48 GEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIREVSLLKELQHRNIIELKSVIHHNHR 107
Query: 410 CYLVYEYAVNGTLSDWVFSNKNEGKYLDWKQRIQIAL------DVATGLNYLHSFTNPPH 463
+L++EYA N + KY+D + + + + G+N+ HS
Sbjct: 108 LHLIFEYAEN-----------DLKKYMDKNPDVSMRVIKSFLYQLINGVNFCHSRRC--- 153
Query: 464 VHKDINSSNVLLD-SDLRA----KIANFAMARPAEGQEGEFALTRHIVGTKGYMAPEYLE 518
+H+D+ N+LL SD KI +F +AR +F H + T Y PE L
Sbjct: 154 LHRDLKPQNLLLSVSDASETPVLKIGDFGLARAFGIPIRQFT---HEIITLWYRPPEILL 210
Query: 519 NGL-VSTKLDVYAFGVLILEML 539
ST +D+++ + EML
Sbjct: 211 GSRHYSTSVDIWSIACIWAEML 232
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 80/165 (48%), Gaps = 20/165 (12%)
Query: 384 KEIALLNKINHSNLIILSGVCFNEG------NCYLVYEYAVNGTLSDWVFSNKNEGKYLD 437
+E+ L+ +NH N+I L V + + YLV E ++ L + LD
Sbjct: 65 RELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVME-LMDANLXQVIQME------LD 117
Query: 438 WKQRIQIALDVATGLNYLHSFTNPPHVHKDINSSNVLLDSDLRAKIANFAMARPAEGQEG 497
++ + + G+ +LHS +H+D+ SN+++ SD KI +F +AR A
Sbjct: 118 HERMSYLLYQMLXGIKHLHSAGI---IHRDLKPSNIVVKSDXTLKILDFGLARTA---GT 171
Query: 498 EFALTRHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLILEMLTGK 542
F +T ++V T+ Y APE + +D+++ G ++ EM+ K
Sbjct: 172 SFMMTPYVV-TRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHK 215
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 51/98 (52%), Gaps = 7/98 (7%)
Query: 445 ALDVATGLNYLHSFTNPPHVHKDINSSNVLLDSDLRAKIANFAMARPAEGQEGEFALTRH 504
A ++ GL LH V++D+ N+LLD +I++ +A EG+ R
Sbjct: 292 AAEICCGLEDLHRERI---VYRDLKPENILLDDHGHIRISDLGLA--VHVPEGQTIKGR- 345
Query: 505 IVGTKGYMAPEYLENGLVSTKLDVYAFGVLILEMLTGK 542
VGT GYMAPE ++N + D +A G L+ EM+ G+
Sbjct: 346 -VGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQ 382
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 80/165 (48%), Gaps = 20/165 (12%)
Query: 384 KEIALLNKINHSNLIILSGVCFNEG------NCYLVYEYAVNGTLSDWVFSNKNEGKYLD 437
+E+ L+ +NH N+I L V + + YLV E ++ L + LD
Sbjct: 72 RELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVME-LMDANLXQVIQME------LD 124
Query: 438 WKQRIQIALDVATGLNYLHSFTNPPHVHKDINSSNVLLDSDLRAKIANFAMARPAEGQEG 497
++ + + G+ +LHS +H+D+ SN+++ SD KI +F +AR A
Sbjct: 125 HERMSYLLYQMLXGIKHLHSAGI---IHRDLKPSNIVVKSDXTLKILDFGLARTA---GT 178
Query: 498 EFALTRHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLILEMLTGK 542
F +T ++V T+ Y APE + +D+++ G ++ EM+ K
Sbjct: 179 SFMMTPYVV-TRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHK 222
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 75/163 (46%), Gaps = 14/163 (8%)
Query: 382 VSKEIALLNKINHSNLIILSGVCFNEGNCYLVYEYAVNGTLSDWVFSNKNEGKYLDWKQR 441
+ +E + K+ H N++ L E YLV++ G L + + + + + D
Sbjct: 52 LEREARICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSE-ADASHC 110
Query: 442 IQIALDVATGLNYLHSFTNPPHVHKDINSSNVLLDSDLRA---KIANFAMARPAEGQEGE 498
IQ L+ + Y HS VH+++ N+LL S + K+A+F +A E
Sbjct: 111 IQQILE---SIAYCHSNGI---VHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAW 164
Query: 499 FALTRHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLILEMLTG 541
GT GY++PE L+ S +D++A GV++ +L G
Sbjct: 165 HGFA----GTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVG 203
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 43/164 (26%), Positives = 80/164 (48%), Gaps = 20/164 (12%)
Query: 384 KEIALLNKINHSNLIILSGVCFNEG------NCYLVYEYAVNGTLSDWVFSNKNEGKYLD 437
+E+ L+ +NH N+I L V + + Y+V E ++ L + LD
Sbjct: 73 RELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVME-LMDANLCQVIQME------LD 125
Query: 438 WKQRIQIALDVATGLNYLHSFTNPPHVHKDINSSNVLLDSDLRAKIANFAMARPAEGQEG 497
++ + + G+ +LHS +H+D+ SN+++ SD KI +F +AR A
Sbjct: 126 HERMSYLLYQMLCGIKHLHSAGI---IHRDLKPSNIVVKSDCTLKILDFGLARTAGTS-- 180
Query: 498 EFALTRHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLILEMLTG 541
F +T ++V T+ Y APE + +D+++ G ++ EM+ G
Sbjct: 181 -FMMTPYVV-TRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKG 222
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 80/165 (48%), Gaps = 20/165 (12%)
Query: 384 KEIALLNKINHSNLIILSGVCFNEG------NCYLVYEYAVNGTLSDWVFSNKNEGKYLD 437
+E+ L+ +NH N+I L V + + YLV E ++ L + LD
Sbjct: 65 RELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVME-LMDANLCQVIQME------LD 117
Query: 438 WKQRIQIALDVATGLNYLHSFTNPPHVHKDINSSNVLLDSDLRAKIANFAMARPAEGQEG 497
++ + + G+ +LHS +H+D+ SN+++ SD KI +F +AR A
Sbjct: 118 HERMSYLLYQMLCGIKHLHSAGI---IHRDLKPSNIVVKSDCTLKILDFGLARTA---GT 171
Query: 498 EFALTRHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLILEMLTGK 542
F +T ++V T+ Y APE + +D+++ G ++ EM+ K
Sbjct: 172 SFMMTPYVV-TRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHK 215
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 80/165 (48%), Gaps = 20/165 (12%)
Query: 384 KEIALLNKINHSNLIILSGVCFNEG------NCYLVYEYAVNGTLSDWVFSNKNEGKYLD 437
+E+ L+ +NH N+I L V + + YLV E ++ L + LD
Sbjct: 71 RELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVME-LMDANLCQVIQME------LD 123
Query: 438 WKQRIQIALDVATGLNYLHSFTNPPHVHKDINSSNVLLDSDLRAKIANFAMARPAEGQEG 497
++ + + G+ +LHS +H+D+ SN+++ SD KI +F +AR A
Sbjct: 124 HERMSYLLYQMLCGIKHLHSAGI---IHRDLKPSNIVVKSDCTLKILDFGLARTA---GT 177
Query: 498 EFALTRHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLILEMLTGK 542
F +T ++V T+ Y APE + +D+++ G ++ EM+ K
Sbjct: 178 SFMMTPYVV-TRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHK 221
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 80/165 (48%), Gaps = 20/165 (12%)
Query: 384 KEIALLNKINHSNLIILSGVCFNEG------NCYLVYEYAVNGTLSDWVFSNKNEGKYLD 437
+E+ L+ +NH N+I L V + + YLV E ++ L + LD
Sbjct: 72 RELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVME-LMDANLCQVIQME------LD 124
Query: 438 WKQRIQIALDVATGLNYLHSFTNPPHVHKDINSSNVLLDSDLRAKIANFAMARPAEGQEG 497
++ + + G+ +LHS +H+D+ SN+++ SD KI +F +AR A
Sbjct: 125 HERMSYLLYQMLCGIKHLHSAGI---IHRDLKPSNIVVKSDCTLKILDFGLARTA---GT 178
Query: 498 EFALTRHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLILEMLTGK 542
F +T ++V T+ Y APE + +D+++ G ++ EM+ K
Sbjct: 179 SFMMTPYVV-TRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHK 222
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 43/164 (26%), Positives = 80/164 (48%), Gaps = 20/164 (12%)
Query: 384 KEIALLNKINHSNLIILSGVCFNEG------NCYLVYEYAVNGTLSDWVFSNKNEGKYLD 437
+E+ L+ +NH N+I L V + + Y+V E ++ L + LD
Sbjct: 72 RELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVME-LMDANLCQVIQME------LD 124
Query: 438 WKQRIQIALDVATGLNYLHSFTNPPHVHKDINSSNVLLDSDLRAKIANFAMARPAEGQEG 497
++ + + G+ +LHS +H+D+ SN+++ SD KI +F +AR A
Sbjct: 125 HERMSYLLYQMLCGIKHLHSAGI---IHRDLKPSNIVVKSDCTLKILDFGLARTAGTS-- 179
Query: 498 EFALTRHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLILEMLTG 541
F +T ++V T+ Y APE + +D+++ G ++ EM+ G
Sbjct: 180 -FMMTPYVV-TRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 75/163 (46%), Gaps = 14/163 (8%)
Query: 382 VSKEIALLNKINHSNLIILSGVCFNEGNCYLVYEYAVNGTLSDWVFSNKNEGKYLDWKQR 441
+ +E + K+ H N++ L E YLV++ G L + + + + + D
Sbjct: 52 LEREARICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSE-ADASHC 110
Query: 442 IQIALDVATGLNYLHSFTNPPHVHKDINSSNVLLDSDLRA---KIANFAMARPAEGQEGE 498
IQ L+ + Y HS VH+++ N+LL S + K+A+F +A E
Sbjct: 111 IQQILE---SIAYCHSNGI---VHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAW 164
Query: 499 FALTRHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLILEMLTG 541
GT GY++PE L+ S +D++A GV++ +L G
Sbjct: 165 HGFA----GTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVG 203
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 80/165 (48%), Gaps = 20/165 (12%)
Query: 384 KEIALLNKINHSNLIILSGVCFNEG------NCYLVYEYAVNGTLSDWVFSNKNEGKYLD 437
+E+ L+ +NH N+I L V + + YLV E ++ L + LD
Sbjct: 66 RELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVME-LMDANLCQVIQME------LD 118
Query: 438 WKQRIQIALDVATGLNYLHSFTNPPHVHKDINSSNVLLDSDLRAKIANFAMARPAEGQEG 497
++ + + G+ +LHS +H+D+ SN+++ SD KI +F +AR A
Sbjct: 119 HERMSYLLYQMLCGIKHLHSAGI---IHRDLKPSNIVVKSDCTLKILDFGLARTA---GT 172
Query: 498 EFALTRHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLILEMLTGK 542
F +T ++V T+ Y APE + +D+++ G ++ EM+ K
Sbjct: 173 SFMMTPYVV-TRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHK 216
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 75/163 (46%), Gaps = 14/163 (8%)
Query: 382 VSKEIALLNKINHSNLIILSGVCFNEGNCYLVYEYAVNGTLSDWVFSNKNEGKYLDWKQR 441
+ +E + K+ H N++ L E YLV++ G L + + + + + D
Sbjct: 51 LEREARICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSE-ADASHC 109
Query: 442 IQIALDVATGLNYLHSFTNPPHVHKDINSSNVLLDSDLRA---KIANFAMARPAEGQEGE 498
IQ L+ + Y HS VH+++ N+LL S + K+A+F +A E
Sbjct: 110 IQQILE---SIAYCHSNGI---VHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAW 163
Query: 499 FALTRHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLILEMLTG 541
GT GY++PE L+ S +D++A GV++ +L G
Sbjct: 164 HGFA----GTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVG 202
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 80/165 (48%), Gaps = 20/165 (12%)
Query: 384 KEIALLNKINHSNLIILSGVCFNEG------NCYLVYEYAVNGTLSDWVFSNKNEGKYLD 437
+E+ L+ +NH N+I L V + + YLV E ++ L + LD
Sbjct: 73 RELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVME-LMDANLCQVIQME------LD 125
Query: 438 WKQRIQIALDVATGLNYLHSFTNPPHVHKDINSSNVLLDSDLRAKIANFAMARPAEGQEG 497
++ + + G+ +LHS +H+D+ SN+++ SD KI +F +AR A
Sbjct: 126 HERMSYLLYQMLCGIKHLHSAGI---IHRDLKPSNIVVKSDCTLKILDFGLARTA---GT 179
Query: 498 EFALTRHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLILEMLTGK 542
F +T ++V T+ Y APE + +D+++ G ++ EM+ K
Sbjct: 180 SFMMTPYVV-TRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHK 223
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 80/165 (48%), Gaps = 20/165 (12%)
Query: 384 KEIALLNKINHSNLIILSGVCFNEG------NCYLVYEYAVNGTLSDWVFSNKNEGKYLD 437
+E+ L+ +NH N+I L V + + YLV E ++ L + LD
Sbjct: 73 RELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVME-LMDANLCQVIQME------LD 125
Query: 438 WKQRIQIALDVATGLNYLHSFTNPPHVHKDINSSNVLLDSDLRAKIANFAMARPAEGQEG 497
++ + + G+ +LHS +H+D+ SN+++ SD KI +F +AR A
Sbjct: 126 HERMSYLLYQMLCGIKHLHSAGI---IHRDLKPSNIVVKSDCTLKILDFGLARTA---GT 179
Query: 498 EFALTRHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLILEMLTGK 542
F +T ++V T+ Y APE + +D+++ G ++ EM+ K
Sbjct: 180 SFMMTPYVV-TRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHK 223
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 80/165 (48%), Gaps = 20/165 (12%)
Query: 384 KEIALLNKINHSNLIILSGVCFNEG------NCYLVYEYAVNGTLSDWVFSNKNEGKYLD 437
+E+ L+ +NH N+I L V + + YLV E ++ L + LD
Sbjct: 72 RELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVME-LMDANLCQVIQME------LD 124
Query: 438 WKQRIQIALDVATGLNYLHSFTNPPHVHKDINSSNVLLDSDLRAKIANFAMARPAEGQEG 497
++ + + G+ +LHS +H+D+ SN+++ SD KI +F +AR A
Sbjct: 125 HERMSYLLYQMLCGIKHLHSAGI---IHRDLKPSNIVVKSDCTLKILDFGLARTA---GT 178
Query: 498 EFALTRHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLILEMLTGK 542
F +T ++V T+ Y APE + +D+++ G ++ EM+ K
Sbjct: 179 SFMMTPYVV-TRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHK 222
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 80/165 (48%), Gaps = 20/165 (12%)
Query: 384 KEIALLNKINHSNLIILSGVCFNEG------NCYLVYEYAVNGTLSDWVFSNKNEGKYLD 437
+E+ L+ +NH N+I L V + + YLV E ++ L + LD
Sbjct: 66 RELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVME-LMDANLCQVIQME------LD 118
Query: 438 WKQRIQIALDVATGLNYLHSFTNPPHVHKDINSSNVLLDSDLRAKIANFAMARPAEGQEG 497
++ + + G+ +LHS +H+D+ SN+++ SD KI +F +AR A
Sbjct: 119 HERMSYLLYQMLCGIKHLHSAGI---IHRDLKPSNIVVKSDCTLKILDFGLARTA---GT 172
Query: 498 EFALTRHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLILEMLTGK 542
F +T ++V T+ Y APE + +D+++ G ++ EM+ K
Sbjct: 173 SFMMTPYVV-TRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHK 216
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 43/164 (26%), Positives = 80/164 (48%), Gaps = 20/164 (12%)
Query: 384 KEIALLNKINHSNLIILSGVCFNEG------NCYLVYEYAVNGTLSDWVFSNKNEGKYLD 437
+E+ L+ +NH N+I L V + + Y+V E ++ L + LD
Sbjct: 72 RELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVME-LMDANLCQVIQME------LD 124
Query: 438 WKQRIQIALDVATGLNYLHSFTNPPHVHKDINSSNVLLDSDLRAKIANFAMARPAEGQEG 497
++ + + G+ +LHS +H+D+ SN+++ SD KI +F +AR A
Sbjct: 125 HERMSYLLYQMLCGIKHLHSAGI---IHRDLKPSNIVVKSDCTLKILDFGLARTAGTS-- 179
Query: 498 EFALTRHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLILEMLTG 541
F +T ++V T+ Y APE + +D+++ G ++ EM+ G
Sbjct: 180 -FMMTPYVV-TRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 75/163 (46%), Gaps = 14/163 (8%)
Query: 382 VSKEIALLNKINHSNLIILSGVCFNEGNCYLVYEYAVNGTLSDWVFSNKNEGKYLDWKQR 441
+ +E + K+ H N++ L E YLV++ G L + + + + + D
Sbjct: 75 LEREARICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSE-ADASHC 133
Query: 442 IQIALDVATGLNYLHSFTNPPHVHKDINSSNVLLDSDLRA---KIANFAMARPAEGQEGE 498
IQ L+ + Y HS VH+++ N+LL S + K+A+F +A E
Sbjct: 134 IQQILE---SIAYCHSNGI---VHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAW 187
Query: 499 FALTRHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLILEMLTG 541
GT GY++PE L+ S +D++A GV++ +L G
Sbjct: 188 HGF----AGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVG 226
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/172 (27%), Positives = 76/172 (44%), Gaps = 15/172 (8%)
Query: 375 IKKVNGDVSKEIALLNKI-NHSNLIILSGVCFNEGNCYLVYEYAVNGTLSDWVFSNKNEG 433
I K D S+EI +L + H N+I L V + + YLV E G L D + K
Sbjct: 60 IDKSKRDPSEEIEILLRYGQHPNIITLKDVYDDGKHVYLVTELMRGGELLDKILRQK--- 116
Query: 434 KYLDWKQRIQIALDVATGLNYLHSFTNPPHVHKDINSSNVL-LDSDLRA---KIANFAMA 489
+ ++ + + + YLHS VH+D+ SN+L +D +I +F A
Sbjct: 117 -FFSEREASFVLHTIGKTVEYLHSQGV---VHRDLKPSNILYVDESGNPECLRICDFGFA 172
Query: 490 RPAEGQEGEFALTRHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLILEMLTG 541
+ + G L T ++APE L+ D+++ G+L+ ML G
Sbjct: 173 KQLRAENG---LLMTPCYTANFVAPEVLKRQGYDEGCDIWSLGILLYTMLAG 221
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/172 (27%), Positives = 76/172 (44%), Gaps = 15/172 (8%)
Query: 375 IKKVNGDVSKEIALLNKI-NHSNLIILSGVCFNEGNCYLVYEYAVNGTLSDWVFSNKNEG 433
I K D S+EI +L + H N+I L V + + YLV E G L D + K
Sbjct: 60 IDKSKRDPSEEIEILLRYGQHPNIITLKDVYDDGKHVYLVTELMRGGELLDKILRQK--- 116
Query: 434 KYLDWKQRIQIALDVATGLNYLHSFTNPPHVHKDINSSNVL-LDSDLRA---KIANFAMA 489
+ ++ + + + YLHS VH+D+ SN+L +D +I +F A
Sbjct: 117 -FFSEREASFVLHTIGKTVEYLHSQGV---VHRDLKPSNILYVDESGNPECLRICDFGFA 172
Query: 490 RPAEGQEGEFALTRHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLILEMLTG 541
+ + G L T ++APE L+ D+++ G+L+ ML G
Sbjct: 173 KQLRAENG---LLMTPCYTANFVAPEVLKRQGYDEGCDIWSLGILLYTMLAG 221
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/164 (26%), Positives = 79/164 (48%), Gaps = 20/164 (12%)
Query: 384 KEIALLNKINHSNLIILSGVCFNEG------NCYLVYEYAVNGTLSDWVFSNKNEGKYLD 437
+E+ L+ +NH N+I L V + + Y+V E ++ L + LD
Sbjct: 72 RELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMEL-MDANLCQVIQME------LD 124
Query: 438 WKQRIQIALDVATGLNYLHSFTNPPHVHKDINSSNVLLDSDLRAKIANFAMARPAEGQEG 497
++ + + G+ +LHS +H+D+ SN+++ SD KI +F +AR A
Sbjct: 125 HERMSYLLYQMLCGIKHLHSAGI---IHRDLKPSNIVVKSDCTLKILDFGLARTAGTS-- 179
Query: 498 EFALTRHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLILEMLTG 541
F +T +V T+ Y APE + +D+++ G ++ EM+ G
Sbjct: 180 -FMMTPEVV-TRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/165 (24%), Positives = 78/165 (47%), Gaps = 20/165 (12%)
Query: 384 KEIALLNKINHSNLIILSGV-----CFNEGNCYLVYEYAVNGTLSDWVFSNKNEGKYLDW 438
+E+ LL + H N+I L V E N + + + L++ V K ++ +
Sbjct: 70 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF 129
Query: 439 KQRIQIALDVATGLNYLHSFTNPPHVHKDINSSNVLLDSDLRAKIANFAMARPAEGQEGE 498
+ + GL Y+HS +H+D+ SN+ ++ D KI + +AR + +
Sbjct: 130 -----LIYQILRGLKYIHSADI---IHRDLKPSNLAVNEDCELKILDAGLARHTDDEMTG 181
Query: 499 FALTRHIVGTKGYMAPEYLENGL-VSTKLDVYAFGVLILEMLTGK 542
+ V T+ Y APE + N + + +D+++ G ++ E+LTG+
Sbjct: 182 Y------VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/165 (24%), Positives = 78/165 (47%), Gaps = 20/165 (12%)
Query: 384 KEIALLNKINHSNLIILSGV-----CFNEGNCYLVYEYAVNGTLSDWVFSNKNEGKYLDW 438
+E+ LL + H N+I L V E N + + + L++ V K ++ +
Sbjct: 70 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF 129
Query: 439 KQRIQIALDVATGLNYLHSFTNPPHVHKDINSSNVLLDSDLRAKIANFAMARPAEGQEGE 498
+ + GL Y+HS +H+D+ SN+ ++ D KI + +AR + +
Sbjct: 130 -----LIYQILRGLKYIHSADI---IHRDLKPSNLAVNEDCELKILDRGLARHTDDEMTG 181
Query: 499 FALTRHIVGTKGYMAPEYLENGL-VSTKLDVYAFGVLILEMLTGK 542
+ V T+ Y APE + N + + +D+++ G ++ E+LTG+
Sbjct: 182 Y------VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium
Dependent Protein Kinase Cgd7_1840 In Presence Of
Indirubin E804
Length = 277
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/162 (27%), Positives = 74/162 (45%), Gaps = 15/162 (9%)
Query: 383 SKEIALLNKINHSNLIILSGVCFNEGNCYLVYEYAVNGTLSDWVFSNKNEGKYLDWKQRI 442
+EI ++ ++H N+I L + + YLV E G L F +
Sbjct: 54 KQEIEIMKSLDHPNIIRLYETFEDNTDIYLVMELCTGGEL----FERVVHKRVFRESDAA 109
Query: 443 QIALDVATGLNYLHSFTNPPHVHKDINSSNVLL--DS-DLRAKIANFAMARPAEGQEGEF 499
+I DV + + Y H H+D+ N L DS D K+ +F +A A + G+
Sbjct: 110 RIMKDVLSAVAYCHKLNV---AHRDLKPENFLFLTDSPDSPLKLIDFGLA--ARFKPGKM 164
Query: 500 ALTRHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLILEMLTG 541
T+ VGT Y++P+ LE GL + D ++ GV++ +L G
Sbjct: 165 MRTK--VGTPYYVSPQVLE-GLYGPECDEWSAGVMMYVLLCG 203
>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|B Chain B, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|D Chain D, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
Length = 294
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/162 (27%), Positives = 74/162 (45%), Gaps = 15/162 (9%)
Query: 383 SKEIALLNKINHSNLIILSGVCFNEGNCYLVYEYAVNGTLSDWVFSNKNEGKYLDWKQRI 442
+EI ++ ++H N+I L + + YLV E G L F +
Sbjct: 71 KQEIEIMKSLDHPNIIRLYETFEDNTDIYLVMELCTGGEL----FERVVHKRVFRESDAA 126
Query: 443 QIALDVATGLNYLHSFTNPPHVHKDINSSNVLL--DS-DLRAKIANFAMARPAEGQEGEF 499
+I DV + + Y H H+D+ N L DS D K+ +F +A A + G+
Sbjct: 127 RIMKDVLSAVAYCHKLNV---AHRDLKPENFLFLTDSPDSPLKLIDFGLA--ARFKPGKM 181
Query: 500 ALTRHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLILEMLTG 541
T+ VGT Y++P+ LE GL + D ++ GV++ +L G
Sbjct: 182 MRTK--VGTPYYVSPQVLE-GLYGPECDEWSAGVMMYVLLCG 220
>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
pdb|2I6L|B Chain B, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
Length = 320
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 100/209 (47%), Gaps = 31/209 (14%)
Query: 384 KEIALLNKINHSNLIILSGVCFNEGN--------------CYLVYEYAVNGTLSDWVFSN 429
+EI ++ +++H N++ + + G+ Y+V EY + L++ +
Sbjct: 57 REIKIIRRLDHDNIVKVFEILGPSGSQLTDDVGSLTELNSVYIVQEY-METDLANVL--- 112
Query: 430 KNEGKYLDWKQRIQIALDVATGLNYLHSFTNPPHVHKDINSSNVLLDS-DLRAKIANFAM 488
+G L+ R+ + GL Y+HS +H+D+ +N+ +++ DL KI +F +
Sbjct: 113 -EQGPLLEEHARL-FMYQLLRGLKYIHSANV---LHRDLKPANLFINTEDLVLKIGDFGL 167
Query: 489 AR---PAEGQEGEFALTRHIVGTKGYMAPEYLENGLVSTK-LDVYAFGVLILEMLTGKEA 544
AR P +G L+ +V TK Y +P L + TK +D++A G + EMLTGK
Sbjct: 168 ARIMDPHYSHKGH--LSEGLV-TKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKTL 224
Query: 545 AALHAEENNMHLSDVLNAVLTKEDGEESL 573
A E M L V+ +ED +E L
Sbjct: 225 FAGAHELEQMQLILESIPVVHEEDRQELL 253
>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2: Se-Met Derivative
Length = 342
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/172 (26%), Positives = 74/172 (43%), Gaps = 15/172 (8%)
Query: 375 IKKVNGDVSKEIALLNKI-NHSNLIILSGVCFNEGNCYLVYEYAVNGTLSDWVFSNKNEG 433
I K D ++EI +L + H N+I L V + Y+V E G L D + K
Sbjct: 55 IDKSKRDPTEEIEILLRYGQHPNIITLKDVYDDGKYVYVVTELXKGGELLDKILRQK--- 111
Query: 434 KYLDWKQRIQIALDVATGLNYLHSFTNPPHVHKDINSSNVLLDSDL----RAKIANFAMA 489
+ ++ + + + YLH+ VH+D+ SN+L + +I +F A
Sbjct: 112 -FFSEREASAVLFTITKTVEYLHAQGV---VHRDLKPSNILYVDESGNPESIRICDFGFA 167
Query: 490 RPAEGQEGEFALTRHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLILEMLTG 541
+ + G L T ++APE LE D+++ GVL+ LTG
Sbjct: 168 KQLRAENG---LLXTPCYTANFVAPEVLERQGYDAACDIWSLGVLLYTXLTG 216
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/196 (26%), Positives = 95/196 (48%), Gaps = 23/196 (11%)
Query: 361 GSVYRGKI--NGGFAAIKKVNGDV---SKEIALLNKINHSNLIILSGVCFNEGNCY-LVY 414
G VY+ K+ +G AIKKV D ++E+ ++ K++H N++ L ++ G VY
Sbjct: 35 GVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVY 94
Query: 415 EYAVNGTLSDWVFSNKNEGKYLDWKQRIQI------ALDVATGLNYLHSFTNPPHVHKDI 468
V + + V+ + Y KQ + + + L Y+HSF H+DI
Sbjct: 95 LNLVLDYVPETVY--RVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGI---CHRDI 149
Query: 469 NSSNVLLDSDLRA-KIANFAMARPAEGQEGEFALTRHIVGTKGYMAPEYLENGL-VSTKL 526
N+LLD D K+ +F A+ + GE ++ + ++ Y APE + ++ +
Sbjct: 150 KPQNLLLDPDTAVLKLCDFGSAK--QLVRGEPNVS--XICSRYYRAPELIFGATDYTSSI 205
Query: 527 DVYAFGVLILEMLTGK 542
DV++ G ++ E+L G+
Sbjct: 206 DVWSAGCVLAELLLGQ 221
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/165 (24%), Positives = 78/165 (47%), Gaps = 20/165 (12%)
Query: 384 KEIALLNKINHSNLIILSGV-----CFNEGNCYLVYEYAVNGTLSDWVFSNKNEGKYLDW 438
+E+ LL + H N+I L V E N + + + L++ V K ++ +
Sbjct: 70 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF 129
Query: 439 KQRIQIALDVATGLNYLHSFTNPPHVHKDINSSNVLLDSDLRAKIANFAMARPAEGQEGE 498
+ + GL Y+HS +H+D+ SN+ ++ D KI + +AR + +
Sbjct: 130 -----LIYQILRGLKYIHSADI---IHRDLKPSNLAVNEDCELKILDGGLARHTDDEMTG 181
Query: 499 FALTRHIVGTKGYMAPEYLENGL-VSTKLDVYAFGVLILEMLTGK 542
+ V T+ Y APE + N + + +D+++ G ++ E+LTG+
Sbjct: 182 Y------VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/196 (26%), Positives = 95/196 (48%), Gaps = 23/196 (11%)
Query: 361 GSVYRGKI--NGGFAAIKKVNGDV---SKEIALLNKINHSNLIILSGVCFNEGNCY-LVY 414
G VY+ K+ +G AIKKV D ++E+ ++ K++H N++ L ++ G VY
Sbjct: 34 GVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVY 93
Query: 415 EYAVNGTLSDWVFSNKNEGKYLDWKQRIQI------ALDVATGLNYLHSFTNPPHVHKDI 468
V + + V+ + Y KQ + + + L Y+HSF H+DI
Sbjct: 94 LNLVLDYVPETVY--RVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGI---CHRDI 148
Query: 469 NSSNVLLDSDLRA-KIANFAMARPAEGQEGEFALTRHIVGTKGYMAPEYLENGL-VSTKL 526
N+LLD D K+ +F A+ + GE ++ + ++ Y APE + ++ +
Sbjct: 149 KPQNLLLDPDTAVLKLCDFGSAK--QLVRGEPNVS--XICSRYYRAPELIFGATDYTSSI 204
Query: 527 DVYAFGVLILEMLTGK 542
DV++ G ++ E+L G+
Sbjct: 205 DVWSAGCVLAELLLGQ 220
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/143 (24%), Positives = 63/143 (44%), Gaps = 23/143 (16%)
Query: 411 YLVYEYAVNGTLSDWV-----FSNKNEGKYLDWKQRIQIALDVATGLNYLHSFTNPPHVH 465
Y+ + L DW+ ++ G L I + +A + +LHS +H
Sbjct: 137 YIQMQLCRKENLKDWMNRRCSLEDREHGVCL------HIFIQIAEAVEFLHSKG---LMH 187
Query: 466 KDINSSNVLLDSDLRAKIANFAMARPAEGQEGE---------FALTRHIVGTKGYMAPEY 516
+D+ SN+ D K+ +F + + E E +A VGTK YM+PE
Sbjct: 188 RDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYATHXGQVGTKLYMSPEQ 247
Query: 517 LENGLVSTKLDVYAFGVLILEML 539
+ S K+D+++ G+++ E+L
Sbjct: 248 IHGNNYSHKVDIFSLGLILFELL 270
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/196 (26%), Positives = 95/196 (48%), Gaps = 23/196 (11%)
Query: 361 GSVYRGKI--NGGFAAIKKVNGDV---SKEIALLNKINHSNLIILSGVCFNEGNCY-LVY 414
G VY+ K+ +G AIKKV D ++E+ ++ K++H N++ L ++ G VY
Sbjct: 34 GVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVY 93
Query: 415 EYAVNGTLSDWVFSNKNEGKYLDWKQRIQI------ALDVATGLNYLHSFTNPPHVHKDI 468
V + + V+ + Y KQ + + + L Y+HSF H+DI
Sbjct: 94 LNLVLDYVPETVY--RVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGI---CHRDI 148
Query: 469 NSSNVLLDSDLRA-KIANFAMARPAEGQEGEFALTRHIVGTKGYMAPEYLENGL-VSTKL 526
N+LLD D K+ +F A+ + GE ++ + ++ Y APE + ++ +
Sbjct: 149 KPQNLLLDPDTAVLKLCDFGSAK--QLVRGEPNVS--XICSRYYRAPELIFGATDYTSSI 204
Query: 527 DVYAFGVLILEMLTGK 542
DV++ G ++ E+L G+
Sbjct: 205 DVWSAGCVLAELLLGQ 220
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/196 (26%), Positives = 95/196 (48%), Gaps = 23/196 (11%)
Query: 361 GSVYRGKI--NGGFAAIKKVNGDV---SKEIALLNKINHSNLIILSGVCFNEGNCY-LVY 414
G VY+ K+ +G AIKKV D ++E+ ++ K++H N++ L ++ G VY
Sbjct: 34 GVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVY 93
Query: 415 EYAVNGTLSDWVFSNKNEGKYLDWKQRIQI------ALDVATGLNYLHSFTNPPHVHKDI 468
V + + V+ + Y KQ + + + L Y+HSF H+DI
Sbjct: 94 LNLVLDYVPETVY--RVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGI---CHRDI 148
Query: 469 NSSNVLLDSDLRA-KIANFAMARPAEGQEGEFALTRHIVGTKGYMAPEYLENGL-VSTKL 526
N+LLD D K+ +F A+ + GE ++ + ++ Y APE + ++ +
Sbjct: 149 KPQNLLLDPDTAVLKLCDFGSAK--QLVRGEPNVS--YICSRYYRAPELIFGATDYTSSI 204
Query: 527 DVYAFGVLILEMLTGK 542
DV++ G ++ E+L G+
Sbjct: 205 DVWSAGCVLAELLLGQ 220
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/196 (26%), Positives = 95/196 (48%), Gaps = 23/196 (11%)
Query: 361 GSVYRGKI--NGGFAAIKKVNGDV---SKEIALLNKINHSNLIILSGVCFNEGNCY-LVY 414
G VY+ K+ +G AIKKV D ++E+ ++ K++H N++ L ++ G VY
Sbjct: 46 GVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVY 105
Query: 415 EYAVNGTLSDWVFSNKNEGKYLDWKQRIQI------ALDVATGLNYLHSFTNPPHVHKDI 468
V + + V+ + Y KQ + + + L Y+HSF H+DI
Sbjct: 106 LNLVLDYVPETVY--RVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGI---CHRDI 160
Query: 469 NSSNVLLDSDLRA-KIANFAMARPAEGQEGEFALTRHIVGTKGYMAPEYLENGL-VSTKL 526
N+LLD D K+ +F A+ + GE ++ + ++ Y APE + ++ +
Sbjct: 161 KPQNLLLDPDTAVLKLCDFGSAK--QLVRGEPNVS--XICSRYYRAPELIFGATDYTSSI 216
Query: 527 DVYAFGVLILEMLTGK 542
DV++ G ++ E+L G+
Sbjct: 217 DVWSAGCVLAELLLGQ 232
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/196 (26%), Positives = 95/196 (48%), Gaps = 23/196 (11%)
Query: 361 GSVYRGKI--NGGFAAIKKVNGDV---SKEIALLNKINHSNLIILSGVCFNEGNCY-LVY 414
G VY+ K+ +G AIKKV D ++E+ ++ K++H N++ L ++ G VY
Sbjct: 62 GVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVY 121
Query: 415 EYAVNGTLSDWVFSNKNEGKYLDWKQRIQI------ALDVATGLNYLHSFTNPPHVHKDI 468
V + + V+ + Y KQ + + + L Y+HSF H+DI
Sbjct: 122 LNLVLDYVPETVY--RVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGI---CHRDI 176
Query: 469 NSSNVLLDSDLRA-KIANFAMARPAEGQEGEFALTRHIVGTKGYMAPEYLENGL-VSTKL 526
N+LLD D K+ +F A+ + GE ++ + ++ Y APE + ++ +
Sbjct: 177 KPQNLLLDPDTAVLKLCDFGSAK--QLVRGEPNVS--YICSRYYRAPELIFGATDYTSSI 232
Query: 527 DVYAFGVLILEMLTGK 542
DV++ G ++ E+L G+
Sbjct: 233 DVWSAGCVLAELLLGQ 248
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/196 (26%), Positives = 95/196 (48%), Gaps = 23/196 (11%)
Query: 361 GSVYRGKI--NGGFAAIKKVNGDV---SKEIALLNKINHSNLIILSGVCFNEGNCY-LVY 414
G VY+ K+ +G AIKKV D ++E+ ++ K++H N++ L ++ G VY
Sbjct: 47 GVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVY 106
Query: 415 EYAVNGTLSDWVFSNKNEGKYLDWKQRIQI------ALDVATGLNYLHSFTNPPHVHKDI 468
V + + V+ + Y KQ + + + L Y+HSF H+DI
Sbjct: 107 LNLVLDYVPETVY--RVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGI---CHRDI 161
Query: 469 NSSNVLLDSDLRA-KIANFAMARPAEGQEGEFALTRHIVGTKGYMAPEYLENGL-VSTKL 526
N+LLD D K+ +F A+ + GE ++ + ++ Y APE + ++ +
Sbjct: 162 KPQNLLLDPDTAVLKLCDFGSAK--QLVRGEPNVS--YICSRYYRAPELIFGATDYTSSI 217
Query: 527 DVYAFGVLILEMLTGK 542
DV++ G ++ E+L G+
Sbjct: 218 DVWSAGCVLAELLLGQ 233
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/196 (26%), Positives = 95/196 (48%), Gaps = 23/196 (11%)
Query: 361 GSVYRGKI--NGGFAAIKKVNGDV---SKEIALLNKINHSNLIILSGVCFNEGNCY-LVY 414
G VY+ K+ +G AIKKV D ++E+ ++ K++H N++ L ++ G VY
Sbjct: 68 GVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVY 127
Query: 415 EYAVNGTLSDWVFSNKNEGKYLDWKQRIQI------ALDVATGLNYLHSFTNPPHVHKDI 468
V + + V+ + Y KQ + + + L Y+HSF H+DI
Sbjct: 128 LNLVLDYVPETVY--RVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGI---CHRDI 182
Query: 469 NSSNVLLDSDLRA-KIANFAMARPAEGQEGEFALTRHIVGTKGYMAPEYLENGL-VSTKL 526
N+LLD D K+ +F A+ + GE ++ + ++ Y APE + ++ +
Sbjct: 183 KPQNLLLDPDTAVLKLCDFGSAK--QLVRGEPNVS--XICSRYYRAPELIFGATDYTSSI 238
Query: 527 DVYAFGVLILEMLTGK 542
DV++ G ++ E+L G+
Sbjct: 239 DVWSAGCVLAELLLGQ 254
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/196 (26%), Positives = 95/196 (48%), Gaps = 23/196 (11%)
Query: 361 GSVYRGKI--NGGFAAIKKVNGDV---SKEIALLNKINHSNLIILSGVCFNEGNCY-LVY 414
G VY+ K+ +G AIKKV D ++E+ ++ K++H N++ L ++ G VY
Sbjct: 42 GVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVY 101
Query: 415 EYAVNGTLSDWVFSNKNEGKYLDWKQRIQI------ALDVATGLNYLHSFTNPPHVHKDI 468
V + + V+ + Y KQ + + + L Y+HSF H+DI
Sbjct: 102 LNLVLDYVPETVY--RVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGI---CHRDI 156
Query: 469 NSSNVLLDSDLRA-KIANFAMARPAEGQEGEFALTRHIVGTKGYMAPEYLENGL-VSTKL 526
N+LLD D K+ +F A+ + GE ++ + ++ Y APE + ++ +
Sbjct: 157 KPQNLLLDPDTAVLKLCDFGSAK--QLVRGEPNVS--XICSRYYRAPELIFGATDYTSSI 212
Query: 527 DVYAFGVLILEMLTGK 542
DV++ G ++ E+L G+
Sbjct: 213 DVWSAGCVLAELLLGQ 228
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/192 (23%), Positives = 86/192 (44%), Gaps = 23/192 (11%)
Query: 361 GSVYRGK--INGGFAAIKKVNG-------DVSKEIALLNKINHSNLIILSGVCFNEGNCY 411
G VY+ K G AA K + D EI +L +H ++ L G +++G +
Sbjct: 25 GKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYYHDGKLW 84
Query: 412 LVYEYAVNGTLSDWVFSNKNEGKYLDWKQRIQIALDVATGLNYLHSFTNPPHVHKDINSS 471
++ E+ G + D + + G L Q + + LN+LHS +H+D+ +
Sbjct: 85 IMIEFCPGGAV-DAIMLELDRG--LTEPQIQVVCRQMLEALNFLHSKRI---IHRDLKAG 138
Query: 472 NVLLDSDLRAKIANFAMARPAEGQEGEFALTRHIVGTKGYMAPEY-----LENGLVSTKL 526
NVL+ + ++A+F + + +GT +MAPE +++ K
Sbjct: 139 NVLMTLEGDIRLADFGV---SAKNLKTLQKRDSFIGTPYWMAPEVVMCETMKDTPYDYKA 195
Query: 527 DVYAFGVLILEM 538
D+++ G+ ++EM
Sbjct: 196 DIWSLGITLIEM 207
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/196 (26%), Positives = 95/196 (48%), Gaps = 23/196 (11%)
Query: 361 GSVYRGKI--NGGFAAIKKVNGDV---SKEIALLNKINHSNLIILSGVCFNEGNCY-LVY 414
G VY+ K+ +G AIKKV D ++E+ ++ K++H N++ L ++ G VY
Sbjct: 53 GVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVY 112
Query: 415 EYAVNGTLSDWVFSNKNEGKYLDWKQRIQI------ALDVATGLNYLHSFTNPPHVHKDI 468
V + + V+ + Y KQ + + + L Y+HSF H+DI
Sbjct: 113 LNLVLDYVPETVY--RVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGI---CHRDI 167
Query: 469 NSSNVLLDSDLRA-KIANFAMARPAEGQEGEFALTRHIVGTKGYMAPEYLENGL-VSTKL 526
N+LLD D K+ +F A+ + GE ++ + ++ Y APE + ++ +
Sbjct: 168 KPQNLLLDPDTAVLKLCDFGSAK--QLVRGEPNVS--XICSRYYRAPELIFGATDYTSSI 223
Query: 527 DVYAFGVLILEMLTGK 542
DV++ G ++ E+L G+
Sbjct: 224 DVWSAGCVLAELLLGQ 239
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/196 (26%), Positives = 95/196 (48%), Gaps = 23/196 (11%)
Query: 361 GSVYRGKI--NGGFAAIKKVNGDV---SKEIALLNKINHSNLIILSGVCFNEGNCY-LVY 414
G VY+ K+ +G AIKKV D ++E+ ++ K++H N++ L ++ G VY
Sbjct: 46 GVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVY 105
Query: 415 EYAVNGTLSDWVFSNKNEGKYLDWKQRIQI------ALDVATGLNYLHSFTNPPHVHKDI 468
V + + V+ + Y KQ + + + L Y+HSF H+DI
Sbjct: 106 LNLVLDYVPETVY--RVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGI---CHRDI 160
Query: 469 NSSNVLLDSDLRA-KIANFAMARPAEGQEGEFALTRHIVGTKGYMAPEYLENGL-VSTKL 526
N+LLD D K+ +F A+ + GE ++ + ++ Y APE + ++ +
Sbjct: 161 KPQNLLLDPDTAVLKLCDFGSAK--QLVRGEPNVS--XICSRYYRAPELIFGATDYTSSI 216
Query: 527 DVYAFGVLILEMLTGK 542
DV++ G ++ E+L G+
Sbjct: 217 DVWSAGCVLAELLLGQ 232
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/196 (26%), Positives = 95/196 (48%), Gaps = 23/196 (11%)
Query: 361 GSVYRGKI--NGGFAAIKKVNGDV---SKEIALLNKINHSNLIILSGVCFNEGNCY-LVY 414
G VY+ K+ +G AIKKV D ++E+ ++ K++H N++ L ++ G VY
Sbjct: 38 GVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVY 97
Query: 415 EYAVNGTLSDWVFSNKNEGKYLDWKQRIQI------ALDVATGLNYLHSFTNPPHVHKDI 468
V + + V+ + Y KQ + + + L Y+HSF H+DI
Sbjct: 98 LNLVLDYVPETVY--RVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGI---CHRDI 152
Query: 469 NSSNVLLDSDLRA-KIANFAMARPAEGQEGEFALTRHIVGTKGYMAPEYLENGL-VSTKL 526
N+LLD D K+ +F A+ + GE ++ + ++ Y APE + ++ +
Sbjct: 153 KPQNLLLDPDTAVLKLCDFGSAK--QLVRGEPNVS--XICSRYYRAPELIFGATDYTSSI 208
Query: 527 DVYAFGVLILEMLTGK 542
DV++ G ++ E+L G+
Sbjct: 209 DVWSAGCVLAELLLGQ 224
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/196 (26%), Positives = 95/196 (48%), Gaps = 23/196 (11%)
Query: 361 GSVYRGKI--NGGFAAIKKVNGDV---SKEIALLNKINHSNLIILSGVCFNEGNCY-LVY 414
G VY+ K+ +G AIKKV D ++E+ ++ K++H N++ L ++ G VY
Sbjct: 68 GVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVY 127
Query: 415 EYAVNGTLSDWVFSNKNEGKYLDWKQRIQI------ALDVATGLNYLHSFTNPPHVHKDI 468
V + + V+ + Y KQ + + + L Y+HSF H+DI
Sbjct: 128 LNLVLDYVPETVY--RVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGI---CHRDI 182
Query: 469 NSSNVLLDSDLRA-KIANFAMARPAEGQEGEFALTRHIVGTKGYMAPEYLENGL-VSTKL 526
N+LLD D K+ +F A+ + GE ++ + ++ Y APE + ++ +
Sbjct: 183 KPQNLLLDPDTAVLKLCDFGSAK--QLVRGEPNVS--YICSRYYRAPELIFGATDYTSSI 238
Query: 527 DVYAFGVLILEMLTGK 542
DV++ G ++ E+L G+
Sbjct: 239 DVWSAGCVLAELLLGQ 254
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/196 (26%), Positives = 95/196 (48%), Gaps = 23/196 (11%)
Query: 361 GSVYRGKI--NGGFAAIKKVNGDV---SKEIALLNKINHSNLIILSGVCFNEGNCY-LVY 414
G VY+ K+ +G AIKKV D ++E+ ++ K++H N++ L ++ G VY
Sbjct: 70 GVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVY 129
Query: 415 EYAVNGTLSDWVFSNKNEGKYLDWKQRIQI------ALDVATGLNYLHSFTNPPHVHKDI 468
V + + V+ + Y KQ + + + L Y+HSF H+DI
Sbjct: 130 LNLVLDYVPETVY--RVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGI---CHRDI 184
Query: 469 NSSNVLLDSDLRA-KIANFAMARPAEGQEGEFALTRHIVGTKGYMAPEYLENGL-VSTKL 526
N+LLD D K+ +F A+ + GE ++ + ++ Y APE + ++ +
Sbjct: 185 KPQNLLLDPDTAVLKLCDFGSAK--QLVRGEPNVS--YICSRYYRAPELIFGATDYTSSI 240
Query: 527 DVYAFGVLILEMLTGK 542
DV++ G ++ E+L G+
Sbjct: 241 DVWSAGCVLAELLLGQ 256
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/164 (24%), Positives = 74/164 (45%), Gaps = 9/164 (5%)
Query: 381 DVSKEIALLNKINHSNLIILSGVCFNEGNCYLVYEYAVNGTLSDWVFSNKNEGKYLDWKQ 440
D+ +E ++ + + H +++ L ++G Y+V+E+ L + + G
Sbjct: 72 DLKREASICHMLKHPHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAV 131
Query: 441 RIQIALDVATGLNYLHSFTNPPHVHKDINSSNVLLDSDLRA---KIANFAMARPAEGQEG 497
+ L Y H +H+D+ NVLL S + K+ +F +A G+ G
Sbjct: 132 ASHYMRQILEALRYCHDNNI---IHRDVKPENVLLASKENSAPVKLGDFGVAIQL-GESG 187
Query: 498 EFALTRHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLILEMLTG 541
A R VGT +MAPE ++ +DV+ GV++ +L+G
Sbjct: 188 LVAGGR--VGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSG 229
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/196 (26%), Positives = 95/196 (48%), Gaps = 23/196 (11%)
Query: 361 GSVYRGKI--NGGFAAIKKVNGDV---SKEIALLNKINHSNLIILSGVCFNEGNCY-LVY 414
G VY+ K+ +G AIKKV D ++E+ ++ K++H N++ L ++ G VY
Sbjct: 39 GVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVY 98
Query: 415 EYAVNGTLSDWVFSNKNEGKYLDWKQRIQI------ALDVATGLNYLHSFTNPPHVHKDI 468
V + + V+ + Y KQ + + + L Y+HSF H+DI
Sbjct: 99 LNLVLDYVPETVY--RVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGI---CHRDI 153
Query: 469 NSSNVLLDSDLRA-KIANFAMARPAEGQEGEFALTRHIVGTKGYMAPEYLENGL-VSTKL 526
N+LLD D K+ +F A+ + GE ++ + ++ Y APE + ++ +
Sbjct: 154 KPQNLLLDPDTAVLKLCDFGSAK--QLVRGEPNVS--YICSRYYRAPELIFGATDYTSSI 209
Query: 527 DVYAFGVLILEMLTGK 542
DV++ G ++ E+L G+
Sbjct: 210 DVWSAGCVLAELLLGQ 225
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/192 (23%), Positives = 86/192 (44%), Gaps = 23/192 (11%)
Query: 361 GSVYRGK--INGGFAAIKKVNG-------DVSKEIALLNKINHSNLIILSGVCFNEGNCY 411
G VY+ K G AA K + D EI +L +H ++ L G +++G +
Sbjct: 33 GKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYYHDGKLW 92
Query: 412 LVYEYAVNGTLSDWVFSNKNEGKYLDWKQRIQIALDVATGLNYLHSFTNPPHVHKDINSS 471
++ E+ G + D + + G L Q + + LN+LHS +H+D+ +
Sbjct: 93 IMIEFCPGGAV-DAIMLELDRG--LTEPQIQVVCRQMLEALNFLHSKRI---IHRDLKAG 146
Query: 472 NVLLDSDLRAKIANFAMARPAEGQEGEFALTRHIVGTKGYMAPEY-----LENGLVSTKL 526
NVL+ + ++A+F + + +GT +MAPE +++ K
Sbjct: 147 NVLMTLEGDIRLADFGV---SAKNLKTLQKRDSFIGTPYWMAPEVVMCETMKDTPYDYKA 203
Query: 527 DVYAFGVLILEM 538
D+++ G+ ++EM
Sbjct: 204 DIWSLGITLIEM 215
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/196 (26%), Positives = 95/196 (48%), Gaps = 23/196 (11%)
Query: 361 GSVYRGKI--NGGFAAIKKVNGDV---SKEIALLNKINHSNLIILSGVCFNEGNCY-LVY 414
G VY+ K+ +G AIKKV D ++E+ ++ K++H N++ L ++ G VY
Sbjct: 72 GVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVY 131
Query: 415 EYAVNGTLSDWVFSNKNEGKYLDWKQRIQI------ALDVATGLNYLHSFTNPPHVHKDI 468
V + + V+ + Y KQ + + + L Y+HSF H+DI
Sbjct: 132 LNLVLDYVPETVY--RVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGI---CHRDI 186
Query: 469 NSSNVLLDSDLRA-KIANFAMARPAEGQEGEFALTRHIVGTKGYMAPEYLENGL-VSTKL 526
N+LLD D K+ +F A+ + GE ++ + ++ Y APE + ++ +
Sbjct: 187 KPQNLLLDPDTAVLKLCDFGSAK--QLVRGEPNVS--YICSRYYRAPELIFGATDYTSSI 242
Query: 527 DVYAFGVLILEMLTGK 542
DV++ G ++ E+L G+
Sbjct: 243 DVWSAGCVLAELLLGQ 258
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/196 (26%), Positives = 95/196 (48%), Gaps = 23/196 (11%)
Query: 361 GSVYRGKI--NGGFAAIKKVNGDV---SKEIALLNKINHSNLIILSGVCFNEGNCY-LVY 414
G VY+ K+ +G AIKKV D ++E+ ++ K++H N++ L ++ G VY
Sbjct: 113 GVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVY 172
Query: 415 EYAVNGTLSDWVFSNKNEGKYLDWKQRIQI------ALDVATGLNYLHSFTNPPHVHKDI 468
V + + V+ + Y KQ + + + L Y+HSF H+DI
Sbjct: 173 LNLVLDYVPETVY--RVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGI---CHRDI 227
Query: 469 NSSNVLLDSDLRA-KIANFAMARPAEGQEGEFALTRHIVGTKGYMAPEYLENGL-VSTKL 526
N+LLD D K+ +F A+ + GE ++ + ++ Y APE + ++ +
Sbjct: 228 KPQNLLLDPDTAVLKLCDFGSAK--QLVRGEPNVS--YICSRYYRAPELIFGATDYTSSI 283
Query: 527 DVYAFGVLILEMLTGK 542
DV++ G ++ E+L G+
Sbjct: 284 DVWSAGCVLAELLLGQ 299
>pdb|2BUJ|A Chain A, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
pdb|2BUJ|B Chain B, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
Length = 317
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/197 (21%), Positives = 84/197 (42%), Gaps = 23/197 (11%)
Query: 366 GKINGGFAAIKKV-------NGDVSKEIALLNKINHSNLIILSGVCFNE----GNCYLVY 414
G +G F A+K++ + +E + NH N++ L C E +L+
Sbjct: 50 GLHDGHFYALKRILCHEQQDREEAQREADMHRLFNHPNILRLVAYCLRERGAKHEAWLLL 109
Query: 415 EYAVNGTLSDWVFSNKNEGKYLDWKQRIQIALDVATGLNYLHSFTNPPHVHKDINSSNVL 474
+ GTL + + K++G +L Q + + L + GL +H+ + H+D+ +N+L
Sbjct: 110 PFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGICRGLEAIHA---KGYAHRDLKPTNIL 166
Query: 475 LDSDLRAKIANFAMARPA----EGQEGEFALTRHIVG--TKGYMAPEYL---ENGLVSTK 525
L + + + + A EG L T Y APE + ++ +
Sbjct: 167 LGDEGQPVLMDLGSMNQACIHVEGSRQALTLQDWAAQRCTISYRAPELFSVQSHCVIDER 226
Query: 526 LDVYAFGVLILEMLTGK 542
DV++ G ++ M+ G+
Sbjct: 227 TDVWSLGCVLYAMMFGE 243
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/160 (23%), Positives = 78/160 (48%), Gaps = 7/160 (4%)
Query: 381 DVSKEIALLNKINHSNLIILSGVCFNEGNCYLVYEYAVNGTLSDWVFSNKNEGKYLDWKQ 440
++ +E +++++++ ++ L GVC E LV E A G L ++ + E +
Sbjct: 56 EMMREAQIMHQLDNPYIVRLIGVCQAEA-LMLVMEMAGGGPLHKFLVGKREE---IPVSN 111
Query: 441 RIQIALDVATGLNYLHSFTNPPHVHKDINSSNVLLDSDLRAKIANFAMARPAEGQEGEFA 500
++ V+ G+ YL VH+D+ + NVLL + AKI++F +++ + +
Sbjct: 112 VAELLHQVSMGMKYLEEKN---FVHRDLAARNVLLVNRHYAKISDFGLSKALGADDSYYT 168
Query: 501 LTRHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLILEMLT 540
+ APE + S++ DV+++GV + E L+
Sbjct: 169 ARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALS 208
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 42/164 (25%), Positives = 77/164 (46%), Gaps = 20/164 (12%)
Query: 384 KEIALLNKINHSNLIILSGVCFNEG------NCYLVYEYAVNGTLSDWVFSNKNEGKYLD 437
+E+ L+ +NH N+I L V + + Y+V E ++ L + LD
Sbjct: 74 RELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMEL-MDANLCQVIQME------LD 126
Query: 438 WKQRIQIALDVATGLNYLHSFTNPPHVHKDINSSNVLLDSDLRAKIANFAMARPAEGQEG 497
++ + + G+ +LHS +H+D+ SN+++ SD KI +F +AR A G
Sbjct: 127 HERMSYLLYQMLCGIKHLHSAGI---IHRDLKPSNIVVKSDCTLKILDFGLARTA----G 179
Query: 498 EFALTRHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLILEMLTG 541
+ V T+ Y APE + +D+++ G ++ EM+ G
Sbjct: 180 TSFMMVPFVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKG 223
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/190 (22%), Positives = 88/190 (46%), Gaps = 15/190 (7%)
Query: 359 IQGSVYRGKINGGFAAIKKVNG--------DVSKEIALLNKINHSNLIILSGVCFNEGNC 410
++ VYR + AIK + ++ +E +++++++ ++ L GVC E
Sbjct: 352 VRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQAEA-L 410
Query: 411 YLVYEYAVNGTLSDWVFSNKNEGKYLDWKQRIQIALDVATGLNYLHSFTNPPHVHKDINS 470
LV E A G L ++ + E + ++ V+ G+ YL VH+++ +
Sbjct: 411 MLVMEMAGGGPLHKFLVGKREE---IPVSNVAELLHQVSMGMKYLEEKN---FVHRNLAA 464
Query: 471 SNVLLDSDLRAKIANFAMARPAEGQEGEFALTRHIVGTKGYMAPEYLENGLVSTKLDVYA 530
NVLL + AKI++F +++ + + + APE + S++ DV++
Sbjct: 465 RNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWS 524
Query: 531 FGVLILEMLT 540
+GV + E L+
Sbjct: 525 YGVTMWEALS 534
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
Length = 344
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 39/162 (24%), Positives = 80/162 (49%), Gaps = 14/162 (8%)
Query: 382 VSKEIALLNKINHSNLIILSGVCFNEGNCYLVYEYAVNGTLSDWVFSNKN---EGKYLDW 438
V+ + + ++H++++ L G+C + LV +Y G+L D V ++ L+W
Sbjct: 80 VTDHMLAIGSLDHAHIVRLLGLCPG-SSLQLVTQYLPLGSLLDHVRQHRGALGPQLLLNW 138
Query: 439 KQRIQIALDVATGLNYLHSFTNPPHVHKDINSSNVLLDSDLRAKIANFAMARPAEGQEGE 498
+ +A G+ YL VH+++ + NVLL S + ++A+F +A + +
Sbjct: 139 ------GVQIAKGMYYLEEHGM---VHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQ 189
Query: 499 FALTRHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLILEMLT 540
+ K +MA E + G + + DV+++GV + E++T
Sbjct: 190 LLYSEAKTPIK-WMALESIHFGKYTHQSDVWSYGVTVWELMT 230
>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik)
pdb|4DN5|B Chain B, Crystal Structure Of Nf-kb-inducing Kinase (nik)
Length = 356
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 63/238 (26%), Positives = 100/238 (42%), Gaps = 20/238 (8%)
Query: 312 NEKPSNKKFDEESQDFLESISGVAQSLKVYSFKE-LQSATDNFSFTCRIQGSVYR--GKI 368
+ +PS K D E E + V Y ++E + AT G V+R K
Sbjct: 43 SREPSPKTEDNEGVLLTEKLKPVD-----YEYREEVHWATHQLRLGRGSFGEVHRMEDKQ 97
Query: 369 NGGFAAIKKVNGDV--SKEIALLNKINHSNLIILSGVCFNEGNCYLVYEYAVNGTLSDWV 426
G A+KKV +V ++E+ + ++ L G + E G+L V
Sbjct: 98 TGFQCAVKKVRLEVFRAEELMACAGLTSPRIVPLYGAVREGPWVNIFMELLEGGSLGQLV 157
Query: 427 FSNKNEGKYLDWKQRIQIALDVATGLNYLHSFTNPPHVHKDINSSNVLLDSD-LRAKIAN 485
K +G L + + GL YLHS +H D+ + NVLL SD A + +
Sbjct: 158 ---KEQG-CLPEDRALYYLGQALEGLEYLHSRRI---LHGDVKADNVLLSSDGSHAALCD 210
Query: 486 F--AMARPAEGQEGEFALTRHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLILEMLTG 541
F A+ +G + +I GT+ +MAPE + K+DV++ ++L ML G
Sbjct: 211 FGHAVCLQPDGLGKDLLTGDYIPGTETHMAPEVVLGRSCDAKVDVWSSCCMMLHMLNG 268
>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine
Inhibitor
Length = 369
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/165 (26%), Positives = 80/165 (48%), Gaps = 20/165 (12%)
Query: 384 KEIALLNKINHSNLIILSGVCFNEG------NCYLVYEYAVNGTLSDWVFSNKNEGKYLD 437
+E+ L+ +NH N+I L V + + Y+V E ++ L + LD
Sbjct: 77 RELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVME-LMDANLCQVIQME------LD 129
Query: 438 WKQRIQIALDVATGLNYLHSFTNPPHVHKDINSSNVLLDSDLRAKIANFAMARPAEGQEG 497
++ + + G+ +LHS +H+D+ SN+++ SD KI +F +AR A
Sbjct: 130 HERMSYLLYQMLCGIKHLHSAGI---IHRDLKPSNIVVKSDCTLKILDFGLARTAGTS-- 184
Query: 498 EFALTRHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLILEMLTGK 542
F +T ++V T+ Y APE + +D+++ G ++ EM+ K
Sbjct: 185 -FMMTPYVV-TRYYRAPEVILGMGYKENVDLWSVGCIMGEMVCHK 227
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 39/162 (24%), Positives = 80/162 (49%), Gaps = 14/162 (8%)
Query: 382 VSKEIALLNKINHSNLIILSGVCFNEGNCYLVYEYAVNGTLSDWVFSNKN---EGKYLDW 438
V+ + + ++H++++ L G+C + LV +Y G+L D V ++ L+W
Sbjct: 62 VTDHMLAIGSLDHAHIVRLLGLCPGS-SLQLVTQYLPLGSLLDHVRQHRGALGPQLLLNW 120
Query: 439 KQRIQIALDVATGLNYLHSFTNPPHVHKDINSSNVLLDSDLRAKIANFAMARPAEGQEGE 498
+ +A G+ YL VH+++ + NVLL S + ++A+F +A + +
Sbjct: 121 ------GVQIAKGMYYLEEHGM---VHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQ 171
Query: 499 FALTRHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLILEMLT 540
+ K +MA E + G + + DV+++GV + E++T
Sbjct: 172 LLYSEAKTPIK-WMALESIHFGKYTHQSDVWSYGVTVWELMT 212
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 51/192 (26%), Positives = 92/192 (47%), Gaps = 21/192 (10%)
Query: 361 GSVYRGKINGGFA-AIKKVNGDVS---------KEIALLNKINHSNLIILSGVCFNEGNC 410
G VY+ + N G A+KK+ + +EI++L ++ HSN++ L V +
Sbjct: 16 GVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVIHTKKRL 75
Query: 411 YLVYEYAVNGTLSDWVFSNKNEGKYLDWKQRIQIALDVATGLNYLHSFTNPPHVHKDINS 470
LV+E+ ++ L + + EG L+ L + G+ Y H +H+D+
Sbjct: 76 VLVFEH-LDQDLKKLL--DVCEGG-LESVTAKSFLLQLLNGIAYCHDRRV---LHRDLKP 128
Query: 471 SNVLLDSDLRAKIANFAMARPAEGQEGEFALTRHIVGTKGYMAPEYLE-NGLVSTKLDVY 529
N+L++ + KIA+F +AR ++ H V T Y AP+ L + ST +D++
Sbjct: 129 QNLLINREGELKIADFGLARAFGIPVRKYT---HEVVTLWYRAPDVLMGSKKYSTTIDIW 185
Query: 530 AFGVLILEMLTG 541
+ G + EM+ G
Sbjct: 186 SVGCIFAEMVNG 197
>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor
Length = 358
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 43/165 (26%), Positives = 80/165 (48%), Gaps = 20/165 (12%)
Query: 384 KEIALLNKINHSNLIILSGVCFNEG------NCYLVYEYAVNGTLSDWVFSNKNEGKYLD 437
+E+ L+ +NH N+I L V + + Y+V E ++ L + LD
Sbjct: 66 RELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVME-LMDANLCQVIQME------LD 118
Query: 438 WKQRIQIALDVATGLNYLHSFTNPPHVHKDINSSNVLLDSDLRAKIANFAMARPAEGQEG 497
++ + + G+ +LHS +H+D+ SN+++ SD KI +F +AR A
Sbjct: 119 HERMSYLLYQMLCGIKHLHSAGI---IHRDLKPSNIVVKSDCTLKILDFGLARTAGTS-- 173
Query: 498 EFALTRHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLILEMLTGK 542
F +T ++V T+ Y APE + +D+++ G ++ EM+ K
Sbjct: 174 -FMMTPYVV-TRYYRAPEVILGMGYKENVDLWSVGCIMGEMVCHK 216
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 51/192 (26%), Positives = 92/192 (47%), Gaps = 21/192 (10%)
Query: 361 GSVYRGKINGGFA-AIKKVNGDVS---------KEIALLNKINHSNLIILSGVCFNEGNC 410
G VY+ + N G A+KK+ + +EI++L ++ HSN++ L V +
Sbjct: 16 GVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVIHTKKRL 75
Query: 411 YLVYEYAVNGTLSDWVFSNKNEGKYLDWKQRIQIALDVATGLNYLHSFTNPPHVHKDINS 470
LV+E+ ++ L + + EG L+ L + G+ Y H +H+D+
Sbjct: 76 VLVFEH-LDQDLKKLL--DVCEGG-LESVTAKSFLLQLLNGIAYCHDRRV---LHRDLKP 128
Query: 471 SNVLLDSDLRAKIANFAMARPAEGQEGEFALTRHIVGTKGYMAPEYLE-NGLVSTKLDVY 529
N+L++ + KIA+F +AR ++ H V T Y AP+ L + ST +D++
Sbjct: 129 QNLLINREGELKIADFGLARAFGIPVRKYT---HEVVTLWYRAPDVLMGSKKYSTTIDIW 185
Query: 530 AFGVLILEMLTG 541
+ G + EM+ G
Sbjct: 186 SVGCIFAEMVNG 197
>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B)
pdb|3LM5|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B) IN Complex With Quercetin
Length = 327
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 76/186 (40%), Gaps = 17/186 (9%)
Query: 361 GSVYRGKINGGFAAIKKVNGDVSKEIALLNKINHSNLII-LSGVCFNEGNCYLVYEYAVN 419
G Y K + ++ EIA+L +I L V N L+ EYA
Sbjct: 54 GQEYAAKFLKKRRRGQDCRAEILHEIAVLELAKSCPRVINLHEVYENTSEIILILEYAAG 113
Query: 420 GTLSDWVFSNKNEGKYLDWKQRIQIALDVATGLNYLHSFTNPPHVHKDINSSNVLLDS-- 477
G + E + I++ + G+ YLH VH D+ N+LL S
Sbjct: 114 GEIFSLCLPELAE--MVSENDVIRLIKQILEGVYYLHQNNI---VHLDLKPQNILLSSIY 168
Query: 478 ---DLRAKIANFAMARPAEGQEGEFALTRHIVGTKGYMAPEYLENGLVSTKLDVYAFGVL 534
D+ KI +F M+R G R I+GT Y+APE L ++T D++ G++
Sbjct: 169 PLGDI--KIVDFGMSRKI----GHACELREIMGTPEYLAPEILNYDPITTATDMWNIGII 222
Query: 535 ILEMLT 540
+LT
Sbjct: 223 AYMLLT 228
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 74/157 (47%), Gaps = 10/157 (6%)
Query: 385 EIALLNKINHSNLIILSGVCFNEGNCYLVYEYAVNGTLSDWVFSNKNEGKYLDWKQRIQI 444
E +L ++ H ++ L G YL+ EY G L + EG +++ +
Sbjct: 71 ERNILEEVKHPFIVDLIYAFQTGGKLYLILEYLSGGEL---FMQLEREGIFMEDTACFYL 127
Query: 445 ALDVATGLNYLHSFTNPPHVHKDINSSNVLLDSDLRAKIANFAMARPAEGQEGEFALTRH 504
A +++ L +LH +++D+ N++L+ K+ +F + + + +G +T
Sbjct: 128 A-EISMALGHLH---QKGIIYRDLKPENIMLNHQGHVKLTDFGLCKESI-HDG--TVTHX 180
Query: 505 IVGTKGYMAPEYLENGLVSTKLDVYAFGVLILEMLTG 541
GT YMAPE L + +D ++ G L+ +MLTG
Sbjct: 181 FCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTG 217
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 51/212 (24%), Positives = 91/212 (42%), Gaps = 30/212 (14%)
Query: 361 GSVYRG--KINGGFAAIKKVNG-------DVSKEIALLNKINHSNLIILSGVCFNEGNCY 411
G VY+ K AA K ++ D EI +L +H N++ L + E N +
Sbjct: 51 GKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLW 110
Query: 412 LVYEYAVNGTLSDWVFSNKNEGKYLDWKQRIQIALDVATGLNYLHSFTNPPHVHKDINSS 471
++ E+ G + + + + L Q + LNYLH + +H+D+ +
Sbjct: 111 ILIEFCAGGAVDAVMLELE---RPLTESQIQVVCKQTLDALNYLH---DNKIIHRDLKAG 164
Query: 472 NVLLDSDLRAKIANFAMARPAEGQEGEFALTRH--IVGTKGYMAPEYL-----ENGLVST 524
N+L D K+A+F ++ + + R +GT +MAPE + ++
Sbjct: 165 NILFTLDGDIKLADFGVS-----AKNTRTIQRRDSFIGTPYWMAPEVVMCETSKDRPYDY 219
Query: 525 KLDVYAFGVLILEMLTGKEAAALHAEENNMHL 556
K DV++ G+ ++EM E H E N M +
Sbjct: 220 KADVWSLGITLIEM---AEIEPPHHELNPMRV 248
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 74/157 (47%), Gaps = 10/157 (6%)
Query: 385 EIALLNKINHSNLIILSGVCFNEGNCYLVYEYAVNGTLSDWVFSNKNEGKYLDWKQRIQI 444
E +L ++ H ++ L G YL+ EY G L + EG +++ +
Sbjct: 71 ERNILEEVKHPFIVDLIYAFQTGGKLYLILEYLSGGEL---FMQLEREGIFMEDTACFYL 127
Query: 445 ALDVATGLNYLHSFTNPPHVHKDINSSNVLLDSDLRAKIANFAMARPAEGQEGEFALTRH 504
A +++ L +LH +++D+ N++L+ K+ +F + + + +G +T
Sbjct: 128 A-EISMALGHLH---QKGIIYRDLKPENIMLNHQGHVKLTDFGLCKESI-HDG--TVTHT 180
Query: 505 IVGTKGYMAPEYLENGLVSTKLDVYAFGVLILEMLTG 541
GT YMAPE L + +D ++ G L+ +MLTG
Sbjct: 181 FCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTG 217
>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|B Chain B, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|D Chain D, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|E Chain E, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
Length = 371
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 63/238 (26%), Positives = 99/238 (41%), Gaps = 20/238 (8%)
Query: 312 NEKPSNKKFDEESQDFLESISGVAQSLKVYSFKE-LQSATDNFSFTCRIQGSVYR--GKI 368
+ +PS K D E E + V Y ++E + AT G V+R K
Sbjct: 62 SREPSPKTEDNEGVLLTEKLKPVD-----YEYREEVHWATHQLRLGRGSFGEVHRMEDKQ 116
Query: 369 NGGFAAIKKVNGDV--SKEIALLNKINHSNLIILSGVCFNEGNCYLVYEYAVNGTLSDWV 426
G A+KKV +V ++E+ + ++ L G + E G+L V
Sbjct: 117 TGFQCAVKKVRLEVFRAEELMACAGLTSPRIVPLYGAVREGPWVNIFMELLEGGSLGQLV 176
Query: 427 FSNKNEGKYLDWKQRIQIALDVATGLNYLHSFTNPPHVHKDINSSNVLLDSD-LRAKIAN 485
K +G L + + GL YLHS +H D+ + NVLL SD A + +
Sbjct: 177 ---KEQG-CLPEDRALYYLGQALEGLEYLHSRRI---LHGDVKADNVLLSSDGSHAALCD 229
Query: 486 F--AMARPAEGQEGEFALTRHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLILEMLTG 541
F A+ +G +I GT+ +MAPE + K+DV++ ++L ML G
Sbjct: 230 FGHAVCLQPDGLGKSLLTGDYIPGTETHMAPEVVLGRSCDAKVDVWSSCCMMLHMLNG 287
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 51/212 (24%), Positives = 91/212 (42%), Gaps = 30/212 (14%)
Query: 361 GSVYRG--KINGGFAAIKKVNG-------DVSKEIALLNKINHSNLIILSGVCFNEGNCY 411
G VY+ K AA K ++ D EI +L +H N++ L + E N +
Sbjct: 51 GKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLW 110
Query: 412 LVYEYAVNGTLSDWVFSNKNEGKYLDWKQRIQIALDVATGLNYLHSFTNPPHVHKDINSS 471
++ E+ G + + + + L Q + LNYLH + +H+D+ +
Sbjct: 111 ILIEFCAGGAVDAVMLELE---RPLTESQIQVVCKQTLDALNYLH---DNKIIHRDLKAG 164
Query: 472 NVLLDSDLRAKIANFAMARPAEGQEGEFALTRH--IVGTKGYMAPEYL-----ENGLVST 524
N+L D K+A+F ++ + + R +GT +MAPE + ++
Sbjct: 165 NILFTLDGDIKLADFGVS-----AKNTRXIQRRDSFIGTPYWMAPEVVMCETSKDRPYDY 219
Query: 525 KLDVYAFGVLILEMLTGKEAAALHAEENNMHL 556
K DV++ G+ ++EM E H E N M +
Sbjct: 220 KADVWSLGITLIEM---AEIEPPHHELNPMRV 248
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 51/212 (24%), Positives = 91/212 (42%), Gaps = 30/212 (14%)
Query: 361 GSVYRG--KINGGFAAIKKVNG-------DVSKEIALLNKINHSNLIILSGVCFNEGNCY 411
G VY+ K AA K ++ D EI +L +H N++ L + E N +
Sbjct: 51 GKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLW 110
Query: 412 LVYEYAVNGTLSDWVFSNKNEGKYLDWKQRIQIALDVATGLNYLHSFTNPPHVHKDINSS 471
++ E+ G + + + + L Q + LNYLH + +H+D+ +
Sbjct: 111 ILIEFCAGGAVDAVMLELE---RPLTESQIQVVCKQTLDALNYLH---DNKIIHRDLKAG 164
Query: 472 NVLLDSDLRAKIANFAMARPAEGQEGEFALTRH--IVGTKGYMAPEYL-----ENGLVST 524
N+L D K+A+F ++ + + R +GT +MAPE + ++
Sbjct: 165 NILFTLDGDIKLADFGVS-----AKNTRXIQRRDXFIGTPYWMAPEVVMCETSKDRPYDY 219
Query: 525 KLDVYAFGVLILEMLTGKEAAALHAEENNMHL 556
K DV++ G+ ++EM E H E N M +
Sbjct: 220 KADVWSLGITLIEM---AEIEPPHHELNPMRV 248
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 50/192 (26%), Positives = 92/192 (47%), Gaps = 21/192 (10%)
Query: 361 GSVYRGKINGGFA-AIKKVNGDVS---------KEIALLNKINHSNLIILSGVCFNEGNC 410
G VY+ + N G A+KK+ + +EI++L ++ HSN++ L V +
Sbjct: 16 GVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVIHTKKRL 75
Query: 411 YLVYEYAVNGTLSDWVFSNKNEGKYLDWKQRIQIALDVATGLNYLHSFTNPPHVHKDINS 470
LV+E+ ++ L + + EG L+ L + G+ Y H +H+D+
Sbjct: 76 VLVFEH-LDQDLKKLL--DVCEGG-LESVTAKSFLLQLLNGIAYCHDRRV---LHRDLKP 128
Query: 471 SNVLLDSDLRAKIANFAMARPAEGQEGEFALTRHIVGTKGYMAPEYLE-NGLVSTKLDVY 529
N+L++ + KIA+F +AR ++ H + T Y AP+ L + ST +D++
Sbjct: 129 QNLLINREGELKIADFGLARAFGIPVRKYT---HEIVTLWYRAPDVLMGSKKYSTTIDIW 185
Query: 530 AFGVLILEMLTG 541
+ G + EM+ G
Sbjct: 186 SVGCIFAEMVNG 197
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 51/196 (26%), Positives = 94/196 (47%), Gaps = 23/196 (11%)
Query: 361 GSVYRGKI--NGGFAAIKKV---NGDVSKEIALLNKINHSNLIILSGVCFNEGNCY-LVY 414
G VY+ K+ +G AIKKV ++E+ ++ K++H N++ L ++ G VY
Sbjct: 34 GVVYQAKLCDSGELVAIKKVLQGKAFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVY 93
Query: 415 EYAVNGTLSDWVFSNKNEGKYLDWKQRIQI------ALDVATGLNYLHSFTNPPHVHKDI 468
V + + V+ + Y KQ + + + L Y+HSF H+DI
Sbjct: 94 LNLVLDYVPETVY--RVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGI---CHRDI 148
Query: 469 NSSNVLLDSDLRA-KIANFAMARPAEGQEGEFALTRHIVGTKGYMAPEYLENGL-VSTKL 526
N+LLD D K+ +F A+ + GE ++ + ++ Y APE + ++ +
Sbjct: 149 KPQNLLLDPDTAVLKLCDFGSAK--QLVRGEPNVS--YICSRYYRAPELIFGATDYTSSI 204
Query: 527 DVYAFGVLILEMLTGK 542
DV++ G ++ E+L G+
Sbjct: 205 DVWSAGCVLAELLLGQ 220
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 51/196 (26%), Positives = 94/196 (47%), Gaps = 23/196 (11%)
Query: 361 GSVYRGKI--NGGFAAIKKV---NGDVSKEIALLNKINHSNLIILSGVCFNEGNCY-LVY 414
G VY+ K+ +G AIKKV ++E+ ++ K++H N++ L ++ G VY
Sbjct: 34 GVVYQAKLCDSGELVAIKKVLQGKAFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVY 93
Query: 415 EYAVNGTLSDWVFSNKNEGKYLDWKQRIQI------ALDVATGLNYLHSFTNPPHVHKDI 468
V + + V+ + Y KQ + + + L Y+HSF H+DI
Sbjct: 94 LNLVLDYVPETVY--RVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGI---CHRDI 148
Query: 469 NSSNVLLDSDLRA-KIANFAMARPAEGQEGEFALTRHIVGTKGYMAPEYLENGL-VSTKL 526
N+LLD D K+ +F A+ + GE ++ + ++ Y APE + ++ +
Sbjct: 149 KPQNLLLDPDTAVLKLCDFGSAK--QLVRGEPNVS--YICSRYYRAPELIFGATDYTSSI 204
Query: 527 DVYAFGVLILEMLTGK 542
DV++ G ++ E+L G+
Sbjct: 205 DVWSAGCVLAELLLGQ 220
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 52/197 (26%), Positives = 95/197 (48%), Gaps = 25/197 (12%)
Query: 361 GSVYRGKI--NGGFAAIKKV---NGDVSKEIALLNKINHSNLIILSGVCFNEGNCYLVYE 415
G VY+ K+ +G AIKKV ++E+ ++ K++H N++ L ++ G E
Sbjct: 34 GVVYQAKLCDSGELVAIKKVLQGKAFKNRELQIMRKLDHCNIVRLRYFFYSSGE--KKDE 91
Query: 416 YAVNGTLSDWVFSN--KNEGKYLDWKQRIQI------ALDVATGLNYLHSFTNPPHVHKD 467
+N L D+V + + Y KQ + + + L Y+HSF H+D
Sbjct: 92 VYLNLVL-DYVPATVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGI---CHRD 147
Query: 468 INSSNVLLDSDLRA-KIANFAMARPAEGQEGEFALTRHIVGTKGYMAPEYLENGL-VSTK 525
I N+LLD D K+ +F A+ + GE ++ + ++ Y APE + ++
Sbjct: 148 IKPQNLLLDPDTAVLKLCDFGSAK--QLVRGEPNVS--XICSRYYRAPELIFGATDYTSS 203
Query: 526 LDVYAFGVLILEMLTGK 542
+DV++ G ++ E+L G+
Sbjct: 204 IDVWSAGCVLAELLLGQ 220
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 32/124 (25%), Positives = 61/124 (49%), Gaps = 10/124 (8%)
Query: 445 ALDVATGLNYLHSFTNPPHVHKDINSSNVLLDSDLRAKIANFAMARPAEGQEGEFALTRH 504
A ++ GL ++H N V++D+ +N+LLD +I++ +A ++ +
Sbjct: 298 AAEIILGLEHMH---NRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHAS---- 350
Query: 505 IVGTKGYMAPEYLENGLV-STKLDVYAFGVLILEMLTGKEAAALHAEENNMHLSDVLNAV 563
VGT GYMAPE L+ G+ + D ++ G ++ ++L G H ++ H D +
Sbjct: 351 -VGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDK-HEIDRMTLT 408
Query: 564 LTKE 567
+ E
Sbjct: 409 MAVE 412
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 32/124 (25%), Positives = 61/124 (49%), Gaps = 10/124 (8%)
Query: 445 ALDVATGLNYLHSFTNPPHVHKDINSSNVLLDSDLRAKIANFAMARPAEGQEGEFALTRH 504
A ++ GL ++H N V++D+ +N+LLD +I++ +A ++ +
Sbjct: 298 AAEIILGLEHMH---NRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHAS---- 350
Query: 505 IVGTKGYMAPEYLENGLV-STKLDVYAFGVLILEMLTGKEAAALHAEENNMHLSDVLNAV 563
VGT GYMAPE L+ G+ + D ++ G ++ ++L G H ++ H D +
Sbjct: 351 -VGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDK-HEIDRMTLT 408
Query: 564 LTKE 567
+ E
Sbjct: 409 MAVE 412
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 32/124 (25%), Positives = 61/124 (49%), Gaps = 10/124 (8%)
Query: 445 ALDVATGLNYLHSFTNPPHVHKDINSSNVLLDSDLRAKIANFAMARPAEGQEGEFALTRH 504
A ++ GL ++H N V++D+ +N+LLD +I++ +A ++ +
Sbjct: 297 AAEIILGLEHMH---NRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHAS---- 349
Query: 505 IVGTKGYMAPEYLENGLV-STKLDVYAFGVLILEMLTGKEAAALHAEENNMHLSDVLNAV 563
VGT GYMAPE L+ G+ + D ++ G ++ ++L G H ++ H D +
Sbjct: 350 -VGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDK-HEIDRMTLT 407
Query: 564 LTKE 567
+ E
Sbjct: 408 MAVE 411
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 32/124 (25%), Positives = 61/124 (49%), Gaps = 10/124 (8%)
Query: 445 ALDVATGLNYLHSFTNPPHVHKDINSSNVLLDSDLRAKIANFAMARPAEGQEGEFALTRH 504
A ++ GL ++H N V++D+ +N+LLD +I++ +A ++ +
Sbjct: 298 AAEIILGLEHMH---NRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHAS---- 350
Query: 505 IVGTKGYMAPEYLENGLV-STKLDVYAFGVLILEMLTGKEAAALHAEENNMHLSDVLNAV 563
VGT GYMAPE L+ G+ + D ++ G ++ ++L G H ++ H D +
Sbjct: 351 -VGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDK-HEIDRMTLT 408
Query: 564 LTKE 567
+ E
Sbjct: 409 MAVE 412
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 41/169 (24%), Positives = 71/169 (42%), Gaps = 26/169 (15%)
Query: 382 VSKEIALLNKINHSNLIILSGVCFNEGNCYLVYEYAVNGTLSDWVFSNKNEGKYLDWKQR 441
V KEI ++ + H L+ L ++ ++YE+ G L + V N+ + +
Sbjct: 201 VRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMIYEFMSGGELFEKVADEHNK---MSEDEA 257
Query: 442 IQIALDVATGLNYLHSFTNPPHVHKDINSSNVLLDSDLRAKIANFAMARPAEGQEGEFAL 501
++ V GL ++H +VH D+ N++ F R E + +F L
Sbjct: 258 VEYMRQVCKGLCHMHENN---YVHLDLKPENIM-----------FTTKRSNELKLIDFGL 303
Query: 502 TRHI---------VGTKGYMAPEYLENGLVSTKLDVYAFGVLILEMLTG 541
T H+ GT + APE E V D+++ GVL +L+G
Sbjct: 304 TAHLDPKQSVKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSG 352
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 49/194 (25%), Positives = 85/194 (43%), Gaps = 30/194 (15%)
Query: 361 GSVYRGKIN--GGFAAIKKVNGD---------VSKEIALLNKINHSNLIILSGVCFNEGN 409
G+V++ K A+K+V D +EI LL ++ H N++ L V ++
Sbjct: 16 GTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKK 75
Query: 410 CYLVYEYAVNGTLSDWVFSNKNEGKYLDWKQRIQIALDVATGLNYLHSFTNPPHVHKDIN 469
LV+E+ + L + S + LD + + GL + HS +H+D+
Sbjct: 76 LTLVFEFC-DQDLKKYFDSCNGD---LDPEIVKSFLFQLLKGLGFCHSRNV---LHRDLK 128
Query: 470 SSNVLLDSDLRAKIANFAMAR----PAEGQEGEFALTRHIVGTKGYMAPEYLENG-LVST 524
N+L++ + K+ANF +AR P E V T Y P+ L L ST
Sbjct: 129 PQNLLINRNGELKLANFGLARAFGIPVRCYSAE-------VVTLWYRPPDVLFGAKLYST 181
Query: 525 KLDVYAFGVLILEM 538
+D+++ G + E+
Sbjct: 182 SIDMWSAGCIFAEL 195
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/142 (26%), Positives = 68/142 (47%), Gaps = 13/142 (9%)
Query: 406 NEGNCYLVYEYAVNGTLSDWVFSNKNEGKYLDWKQRIQIALDVATGLNYLHSFTNPPHVH 465
++ N YLV +Y V G L +K E + + R +A ++ ++ +H +VH
Sbjct: 145 DDNNLYLVMDYYVGGDL--LTLLSKFEDRLPEEMARFYLA-EMVIAIDSVHQLH---YVH 198
Query: 466 KDINSSNVLLDSDLRAKIANFAMARPAEGQEGEFALTRHIVGTKGYMAPEYLE-----NG 520
+DI N+L+D + ++A+F + E + VGT Y++PE L+ G
Sbjct: 199 RDIKPDNILMDMNGHIRLADFGSC--LKLMEDGTVQSSVAVGTPDYISPEILQAMEGGKG 256
Query: 521 LVSTKLDVYAFGVLILEMLTGK 542
+ D ++ GV + EML G+
Sbjct: 257 RYGPECDWWSLGVCMYEMLYGE 278
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/185 (25%), Positives = 80/185 (43%), Gaps = 21/185 (11%)
Query: 367 KINGGFAAI---KKVNGDVSKEIALLNKIN-HSNLIILSGVCFNEGNCYLVYEYAVNGTL 422
K N FA K++ + KEI L H N++ L V ++ + +LV E G L
Sbjct: 34 KSNQAFAVKIISKRMEANTQKEITALKLCEGHPNIVKLHEVFHDQLHTFLVMELLNGGEL 93
Query: 423 SDWVFSNKNEGKYLDWKQRIQIALDVATGLNYLHSFTNPPHVHKDINSSNVLL---DSDL 479
F + K+ + I + + ++++H VH+D+ N+L + +L
Sbjct: 94 ----FERIKKKKHFSETEASYIMRKLVSAVSHMHDVGV---VHRDLKPENLLFTDENDNL 146
Query: 480 RAKIANFAMAR--PAEGQEGEFALTRHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLILE 537
KI +F AR P + Q + T Y APE L D+++ GV++
Sbjct: 147 EIKIIDFGFARLKPPDNQP-----LKTPCFTLHYAAPELLNQNGYDESCDLWSLGVILYT 201
Query: 538 MLTGK 542
ML+G+
Sbjct: 202 MLSGQ 206
>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O17|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O2M|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
pdb|3O2M|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
Length = 370
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 77/165 (46%), Gaps = 20/165 (12%)
Query: 384 KEIALLNKINHSNLIILSGVCFNEG------NCYLVYEYAVNGTLSDWVFSNKNEGKYLD 437
+E+ L+ +NH N+I L V + + Y+V E ++ L + LD
Sbjct: 72 RELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVME-LMDANLCQVIQME------LD 124
Query: 438 WKQRIQIALDVATGLNYLHSFTNPPHVHKDINSSNVLLDSDLRAKIANFAMARPAEGQEG 497
++ + + G+ +LHS +H+D+ SN+++ SD KI +F +AR A G
Sbjct: 125 HERMSYLLYQMLCGIKHLHSAGI---IHRDLKPSNIVVKSDCTLKILDFGLARTA----G 177
Query: 498 EFALTRHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLILEMLTGK 542
+ V T+ Y APE + +D+++ G ++ EM+ K
Sbjct: 178 TSFMMEPEVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVCHK 222
>pdb|3GNI|B Chain B, Structure Of Strad And Mo25
Length = 389
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 60/313 (19%), Positives = 120/313 (38%), Gaps = 74/313 (23%)
Query: 365 RGKINGGFAAIKKVNGD---------VSKEIALLNKINHSNLIILSGVCFNEGNCYLVYE 415
R K G + ++++N + + E+ + NH N++ + ++V
Sbjct: 47 RYKPTGEYVTVRRINLEACSNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELWVVTS 106
Query: 416 YAVNGTLSDWVFSNKNEGKYLDWKQRIQIAL---DVATGLNYLHSFTNPPHVHKDINSSN 472
+ G+ D + ++ ++D + IA V L+Y+H +VH+ + +S+
Sbjct: 107 FMAYGSAKDLICTH-----FMDGMNELAIAYILQGVLKALDYIHHMG---YVHRSVKASH 158
Query: 473 VLLDSDLRAKI----ANFAMARPAEGQEGEFALTRHIVGTKGYMAPEYLENGL--VSTKL 526
+L+ D + + +N +M + Q ++ V +++PE L+ L K
Sbjct: 159 ILISVDGKVYLSGLRSNLSMISHGQRQRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKS 218
Query: 527 DVYAFGV-------------------LILEMLTGK-----EAAALHAEENNMH------- 555
D+Y+ G+ ++LE L G + + + AEE M
Sbjct: 219 DIYSVGITACELANGHVPFKDMPATQMLLEKLNGTVPCLLDTSTIPAEELTMSPSRSVAN 278
Query: 556 --LSDVLNAVLTKEDGEESLRHFIDPTLQGNYPLELALLVIRLIDACLKKDPTDRPTMYE 613
LSD L + +S H T ++ ++ CL+++P RP
Sbjct: 279 SGLSDSLTTSTPRPSNGDSPSHPYHRTFSPHFH--------HFVEQCLQRNPDARP---- 326
Query: 614 IEHSLSNILNASL 626
S S +LN S
Sbjct: 327 ---SASTLLNHSF 336
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/169 (24%), Positives = 71/169 (42%), Gaps = 26/169 (15%)
Query: 382 VSKEIALLNKINHSNLIILSGVCFNEGNCYLVYEYAVNGTLSDWVFSNKNEGKYLDWKQR 441
V KEI ++ + H L+ L ++ ++YE+ G L + V N+ + +
Sbjct: 95 VRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMIYEFMSGGELFEKVADEHNK---MSEDEA 151
Query: 442 IQIALDVATGLNYLHSFTNPPHVHKDINSSNVLLDSDLRAKIANFAMARPAEGQEGEFAL 501
++ V GL ++H +VH D+ N++ F R E + +F L
Sbjct: 152 VEYMRQVCKGLCHMHENN---YVHLDLKPENIM-----------FTTKRSNELKLIDFGL 197
Query: 502 TRHI---------VGTKGYMAPEYLENGLVSTKLDVYAFGVLILEMLTG 541
T H+ GT + APE E V D+++ GVL +L+G
Sbjct: 198 TAHLDPKQSVKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSG 246
>pdb|2WTK|B Chain B, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|E Chain E, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 373
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 60/313 (19%), Positives = 120/313 (38%), Gaps = 74/313 (23%)
Query: 365 RGKINGGFAAIKKVNGD---------VSKEIALLNKINHSNLIILSGVCFNEGNCYLVYE 415
R K G + ++++N + + E+ + NH N++ + ++V
Sbjct: 31 RYKPTGEYVTVRRINLEACSNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELWVVTS 90
Query: 416 YAVNGTLSDWVFSNKNEGKYLDWKQRIQIAL---DVATGLNYLHSFTNPPHVHKDINSSN 472
+ G+ D + ++ ++D + IA V L+Y+H +VH+ + +S+
Sbjct: 91 FMAYGSAKDLICTH-----FMDGMNELAIAYILQGVLKALDYIHHMG---YVHRSVKASH 142
Query: 473 VLLDSDLRAKI----ANFAMARPAEGQEGEFALTRHIVGTKGYMAPEYLENGL--VSTKL 526
+L+ D + + +N +M + Q ++ V +++PE L+ L K
Sbjct: 143 ILISVDGKVYLSGLRSNLSMISHGQRQRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKS 202
Query: 527 DVYAFGV-------------------LILEMLTGK-----EAAALHAEENNMH------- 555
D+Y+ G+ ++LE L G + + + AEE M
Sbjct: 203 DIYSVGITACELANGHVPFKDMPATQMLLEKLNGTVPCLLDTSTIPAEELTMSPSRSVAN 262
Query: 556 --LSDVLNAVLTKEDGEESLRHFIDPTLQGNYPLELALLVIRLIDACLKKDPTDRPTMYE 613
LSD L + +S H T ++ ++ CL+++P RP
Sbjct: 263 SGLSDSLTTSTPRPSNGDSPSHPYHRTFSPHFH--------HFVEQCLQRNPDARP---- 310
Query: 614 IEHSLSNILNASL 626
S S +LN S
Sbjct: 311 ---SASTLLNHSF 320
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 57/264 (21%), Positives = 112/264 (42%), Gaps = 48/264 (18%)
Query: 369 NGGFAAIKK----VNGDVSKEIAL-----LNKINHSNLIILSGVCFNEGNCYLVYEYAVN 419
+G A+K+ VN K + + + ++ + G F EG+ ++ E ++
Sbjct: 75 SGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFREGDVWICMEL-MD 133
Query: 420 GTLSDWVFSNKNEGKYLDWKQRIQIALDVATGLNYLHSFTNPPHVHKDINSSNVLLDSDL 479
+L + ++G+ + +IA+ + L +LHS + +H+D+ SNVL+++
Sbjct: 134 TSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKLS--VIHRDVKPSNVLINALG 191
Query: 480 RAKIANFAMARPAEGQEGEFALTRHIVGTKGYMAPEYLENGL----VSTKLDVYAFGVLI 535
+ K+ +F ++ G + G K YMAPE + L S K D+++ G+ +
Sbjct: 192 QVKMCDFGIS----GYLVDSVAKTIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITM 247
Query: 536 LEMLTGKEAAALHAEENN-----MHLSDVLNAVLTKEDGEESLRHFIDPTLQGNYPLELA 590
+E+ A L ++ L V+ + ++ F+D T Q
Sbjct: 248 IEL------AILRFPYDSWGTPFQQLKQVVEEPSPQLPADKFSAEFVDFTSQ-------- 293
Query: 591 LLVIRLIDACLKKDPTDRPTMYEI 614
CLKK+ +RPT E+
Sbjct: 294 ---------CLKKNSKERPTYPEL 308
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/181 (24%), Positives = 86/181 (47%), Gaps = 31/181 (17%)
Query: 384 KEIALLNKIN-HSNLIILSGVCF--NEGNCYLVYEYAVNGTLSDWVFSNKNEGKYLDWKQ 440
+EI +L +++ H N++ L V N+ + YLV++Y + L + +N L+
Sbjct: 57 REIMILTELSGHENIVNLLNVLRADNDRDVYLVFDY-METDLHAVIRAN-----ILEPVH 110
Query: 441 RIQIALDVATGLNYLHSFTNPPHVHKDINSSNVLLDSDLRAKIANFAMARP--------- 491
+ + + + YLHS +H+D+ SN+LL+++ K+A+F ++R
Sbjct: 111 KQYVVYQLIKVIKYLHSGG---LLHRDMKPSNILLNAECHVKVADFGLSRSFVNIRRVTN 167
Query: 492 ---------AEGQEGEFALTRHIVGTKGYMAPEYLENGLVSTK-LDVYAFGVLILEMLTG 541
E + + + V T+ Y APE L TK +D+++ G ++ E+L G
Sbjct: 168 NIPLSINENTENFDDDQPILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCG 227
Query: 542 K 542
K
Sbjct: 228 K 228
>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2G01|B Chain B, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2GMX|A Chain A, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2GMX|B Chain B, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2H96|A Chain A, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2H96|B Chain B, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2NO3|A Chain A, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
pdb|2NO3|B Chain B, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
Length = 370
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 77/165 (46%), Gaps = 20/165 (12%)
Query: 384 KEIALLNKINHSNLIILSGVCFNEG------NCYLVYEYAVNGTLSDWVFSNKNEGKYLD 437
+E+ L+ +NH N+I L V + + Y+V E ++ L + LD
Sbjct: 72 RELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVME-LMDANLCQVIQME------LD 124
Query: 438 WKQRIQIALDVATGLNYLHSFTNPPHVHKDINSSNVLLDSDLRAKIANFAMARPAEGQEG 497
++ + + G+ +LHS +H+D+ SN+++ SD KI +F +AR A G
Sbjct: 125 HERMSYLLYQMLCGIKHLHSAGI---IHRDLKPSNIVVKSDCTLKILDFGLARTA----G 177
Query: 498 EFALTRHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLILEMLTGK 542
+ V T+ Y APE + +D+++ G ++ EM+ K
Sbjct: 178 TSFMMEPEVVTRYYRAPEVILGMGYKENVDLWSVGCIMGEMVCHK 222
>pdb|1TKI|A Chain A, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
pdb|1TKI|B Chain B, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
Length = 321
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 60/249 (24%), Positives = 107/249 (42%), Gaps = 35/249 (14%)
Query: 372 FAAIKKVNGD----VSKEIALLNKINHSNLIILSGVCFNEGNCYLVYEYAVNGTLSDWVF 427
A KV G V KEI++LN H N++ L + +++E+ ++G +F
Sbjct: 34 MAKFVKVKGTDQVLVKKEISILNIARHRNILHLHESFESMEELVMIFEF-ISGLD---IF 89
Query: 428 SNKNEGKY-LDWKQRIQIALDVATGLNYLHSFTNPPHVHKDINSSNVLLDSDLRA--KIA 484
N + L+ ++ + V L +LHS H DI N++ + + KI
Sbjct: 90 ERINTSAFELNEREIVSYVHQVCEALQFLHSHNIG---HFDIRPENIIYQTRRSSTIKII 146
Query: 485 NFAMARPAEGQEGEFALTRHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLILEMLTGKEA 544
F AR + + R + Y APE ++ +VST D+++ G L+ +L+G
Sbjct: 147 EFGQARQLKPGDN----FRLLFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSG--I 200
Query: 545 AALHAEENNMHLSDVLNAVLTKEDGEESLRHFIDPTLQGNYPLELALLVIRLIDACLKKD 604
AE N + +++NA T + EE+ + E+++ + +D L K+
Sbjct: 201 NPFLAETNQQIIENIMNAEYTFD--EEAFK-------------EISIEAMDFVDRLLVKE 245
Query: 605 PTDRPTMYE 613
R T E
Sbjct: 246 RKSRMTASE 254
>pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 2-(aminothiazoly)phenol (cmp2)
Length = 336
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 49/94 (52%), Gaps = 6/94 (6%)
Query: 451 GLNYLHSFTNPPHVHKDINSSNVLLDSD-LRAKIANF--AMARPAEGQEGEFALTRHIVG 507
GL YLH+ +H D+ + NVLL SD RA + +F A+ +G +I G
Sbjct: 162 GLEYLHTRRI---LHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPG 218
Query: 508 TKGYMAPEYLENGLVSTKLDVYAFGVLILEMLTG 541
T+ +MAPE + K+D+++ ++L ML G
Sbjct: 219 TETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNG 252
>pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX
Length = 361
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/164 (23%), Positives = 72/164 (43%), Gaps = 9/164 (5%)
Query: 381 DVSKEIALLNKINHSNLIILSGVCFNEGNCYLVYEYAVNGTLSDWVFSNKNEGKYLDWKQ 440
D+ +E ++ + + H +++ L ++G Y+V+E+ L + + G
Sbjct: 74 DLKREASICHMLKHPHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAV 133
Query: 441 RIQIALDVATGLNYLHSFTNPPHVHKDINSSNVLLDSDLRA---KIANFAMARPAEGQEG 497
+ L Y H +H+D+ VLL S + K+ F +A G+ G
Sbjct: 134 ASHYMRQILEALRYCHDNNI---IHRDVKPHCVLLASKENSAPVKLGGFGVAIQL-GESG 189
Query: 498 EFALTRHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLILEMLTG 541
A R VGT +MAPE ++ +DV+ GV++ +L+G
Sbjct: 190 LVAGGR--VGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSG 231
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 73/162 (45%), Gaps = 12/162 (7%)
Query: 382 VSKEIALLNKINHSNLIILSGVCFNEGNCYLVYEYAVNGTLSDWVFSNKNEGKYLDWKQR 441
V EI+++N+++H LI L ++ L+ E+ G L D + + E + +
Sbjct: 95 VKNEISIMNQLHHPKLINLHDAFEDKYEMVLILEFLSGGELFDRIAA---EDYKMSEAEV 151
Query: 442 IQIALDVATGLNYLHSFTNPPHVHKDINSSNVLLDSDLRA--KIANFAMARPAEGQEGEF 499
I GL ++H + VH DI N++ ++ + KI +F +A E
Sbjct: 152 INYMRQACEGLKHMHEHSI---VHLDIKPENIMCETKKASSVKIIDFGLATKLNPDE--- 205
Query: 500 ALTRHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLILEMLTG 541
+ + T + APE ++ V D++A GVL +L+G
Sbjct: 206 -IVKVTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSG 246
>pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3C|B Chain B, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3E|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
pdb|4G3E|B Chain B, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
Length = 352
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 49/94 (52%), Gaps = 6/94 (6%)
Query: 451 GLNYLHSFTNPPHVHKDINSSNVLLDSD-LRAKIANF--AMARPAEGQEGEFALTRHIVG 507
GL YLH+ +H D+ + NVLL SD RA + +F A+ +G +I G
Sbjct: 178 GLEYLHTRRI---LHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPG 234
Query: 508 TKGYMAPEYLENGLVSTKLDVYAFGVLILEMLTG 541
T+ +MAPE + K+D+++ ++L ML G
Sbjct: 235 TETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNG 268
>pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3)
Length = 350
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 49/94 (52%), Gaps = 6/94 (6%)
Query: 451 GLNYLHSFTNPPHVHKDINSSNVLLDSD-LRAKIANF--AMARPAEGQEGEFALTRHIVG 507
GL YLH+ +H D+ + NVLL SD RA + +F A+ +G +I G
Sbjct: 176 GLEYLHTRRI---LHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPG 232
Query: 508 TKGYMAPEYLENGLVSTKLDVYAFGVLILEMLTG 541
T+ +MAPE + K+D+++ ++L ML G
Sbjct: 233 TETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNG 266
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/194 (24%), Positives = 85/194 (43%), Gaps = 30/194 (15%)
Query: 361 GSVYRGK--INGGFAAIKKVNGD---------VSKEIALLNKINHSNLIILSGVCFNEGN 409
G+V++ K A+K+V D +EI LL ++ H N++ L V ++
Sbjct: 16 GTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKK 75
Query: 410 CYLVYEYAVNGTLSDWVFSNKNEGKYLDWKQRIQIALDVATGLNYLHSFTNPPHVHKDIN 469
LV+E+ + L + S + LD + + GL + HS +H+D+
Sbjct: 76 LTLVFEFC-DQDLKKYFDSCNGD---LDPEIVKSFLFQLLKGLGFCHSRNV---LHRDLK 128
Query: 470 SSNVLLDSDLRAKIANFAMAR----PAEGQEGEFALTRHIVGTKGYMAPEYLENG-LVST 524
N+L++ + K+A+F +AR P E V T Y P+ L L ST
Sbjct: 129 PQNLLINRNGELKLADFGLARAFGIPVRCYSAE-------VVTLWYRPPDVLFGAKLYST 181
Query: 525 KLDVYAFGVLILEM 538
+D+++ G + E+
Sbjct: 182 SIDMWSAGCIFAEL 195
>pdb|3DLS|A Chain A, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|B Chain B, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|C Chain C, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|D Chain D, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|E Chain E, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|F Chain F, Crystal Structure Of Human Pas Kinase Bound To Adp
Length = 335
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/155 (28%), Positives = 76/155 (49%), Gaps = 11/155 (7%)
Query: 380 GDVSKEIALLNKINHSNLIILSGVCFNEGNCYLVYEYAVNGTLSDWVFSNKNEGKYLDWK 439
G V+ EIA+L+++ H+N+I + + N+G LV E +G L + F +++ LD
Sbjct: 74 GKVTLEIAILSRVEHANIIKVLDIFENQGFFQLVMEKHGSG-LDLFAFIDRH--PRLDEP 130
Query: 440 QRIQIALDVATGLNYLHSFTNPPHVHKDINSSNVLLDSDLRAKIANFAMARPAEGQEGEF 499
I + + + YL +H+DI N+++ D K+ +F A A + G+
Sbjct: 131 LASYIFRQLVSAVGYLRL---KDIIHRDIKDENIVIAEDFTIKLIDFGSA--AYLERGKL 185
Query: 500 ALTRHIVGTKGYMAPEYLE-NGLVSTKLDVYAFGV 533
T GT Y APE L N +L++++ GV
Sbjct: 186 FYT--FCGTIEYCAPEVLMGNPYRGPELEMWSLGV 218
>pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0G|B Chain B, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0H|A Chain A, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0H|B Chain B, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0I|A Chain A, Cask Cam-Kinase Domain- 3'-Amp Complex, P212121 Form
Length = 351
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/164 (23%), Positives = 72/164 (43%), Gaps = 9/164 (5%)
Query: 381 DVSKEIALLNKINHSNLIILSGVCFNEGNCYLVYEYAVNGTLSDWVFSNKNEGKYLDWKQ 440
D+ +E ++ + + H +++ L ++G Y+V+E+ L + + G
Sbjct: 72 DLKREASICHMLKHPHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAV 131
Query: 441 RIQIALDVATGLNYLHSFTNPPHVHKDINSSNVLLDSDLRA---KIANFAMARPAEGQEG 497
+ L Y H +H+D+ VLL S + K+ F +A G+ G
Sbjct: 132 ASHYMRQILEALRYCHDNNI---IHRDVKPHCVLLASKENSAPVKLGGFGVAIQL-GESG 187
Query: 498 EFALTRHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLILEMLTG 541
A R VGT +MAPE ++ +DV+ GV++ +L+G
Sbjct: 188 LVAGGR--VGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSG 229
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 79/187 (42%), Gaps = 19/187 (10%)
Query: 362 SVYRGKINGGFAAIKKVNGDVSKEIALLNKINHSNLIILSGVCFNEGN-CYLVYEYAVNG 420
VY K+ F IK+ + E + +S ++ F + Y+V EY G
Sbjct: 100 KVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGG 159
Query: 421 TLSDWVFSNKNEGKYLDWKQRIQIALDVATGLNYLHSFTNPPHVHKDINSSNVLLDSDLR 480
L + + + K+ R A +V L+ +HS +H+D+ N+LLD
Sbjct: 160 DLVNLMSNYDVPEKW----ARFYTA-EVVLALDAIHSMG---FIHRDVKPDNMLLDKSGH 211
Query: 481 AKIANFA--MARPAEGQEGEFALTRHIVGTKGYMAPEYLE----NGLVSTKLDVYAFGVL 534
K+A+F M EG VGT Y++PE L+ +G + D ++ GV
Sbjct: 212 LKLADFGTCMKMNKEG----MVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVF 267
Query: 535 ILEMLTG 541
+ EML G
Sbjct: 268 LYEMLVG 274
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 79/187 (42%), Gaps = 19/187 (10%)
Query: 362 SVYRGKINGGFAAIKKVNGDVSKEIALLNKINHSNLIILSGVCFNEGN-CYLVYEYAVNG 420
VY K+ F IK+ + E + +S ++ F + Y+V EY G
Sbjct: 95 KVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGG 154
Query: 421 TLSDWVFSNKNEGKYLDWKQRIQIALDVATGLNYLHSFTNPPHVHKDINSSNVLLDSDLR 480
L + + + K+ R A +V L+ +HS +H+D+ N+LLD
Sbjct: 155 DLVNLMSNYDVPEKW----ARFYTA-EVVLALDAIHSMG---FIHRDVKPDNMLLDKSGH 206
Query: 481 AKIANFA--MARPAEGQEGEFALTRHIVGTKGYMAPEYLE----NGLVSTKLDVYAFGVL 534
K+A+F M EG VGT Y++PE L+ +G + D ++ GV
Sbjct: 207 LKLADFGTCMKMNKEG----MVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVF 262
Query: 535 ILEMLTG 541
+ EML G
Sbjct: 263 LYEMLVG 269
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 46/177 (25%), Positives = 76/177 (42%), Gaps = 24/177 (13%)
Query: 381 DVSKEIALLNKINHSNLIILSGVCFNEGNCYLVYEYAVNGTLSDWVFSN---KNEGKYLD 437
+V KE+ ++ + H L+ L +E + ++V + + G L + N K E L
Sbjct: 61 NVFKELQIMQGLEHPFLVNLWYSFQDEEDMFMVVDLLLGGDLRYHLQQNVHFKEETVKL- 119
Query: 438 WKQRIQIALDVATGLNYLHSFTNPPHVHKDINSSNVLLDSDLRAKIANFAMAR--PAEGQ 495
++ L+YL N +H+D+ N+LLD I +F +A P E Q
Sbjct: 120 ------FICELVMALDYLQ---NQRIIHRDMKPDNILLDEHGHVHITDFNIAAMLPRETQ 170
Query: 496 EGEFALTRHIVGTKGYMAPEYL---ENGLVSTKLDVYAFGVLILEMLTGKEAAALHA 549
A GTK YMAPE + S +D ++ GV E+L G+ + +
Sbjct: 171 ITTMA------GTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRPYHIRS 221
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 38/164 (23%), Positives = 73/164 (44%), Gaps = 22/164 (13%)
Query: 393 NHSNLIILSGVCFNEGNCYLVYEYAVNGTLSDWVFSNKNEGKYLDWKQRIQI-------- 444
NH N++ L G C G ++ EY G L + F + ++ K I
Sbjct: 101 NHMNIVNLLGACTIGGPTLVITEYCCYGDLLN--FLRRKRDSFICSKTSPAIMEDDELAL 158
Query: 445 --------ALDVATGLNYLHSFTNPPHVHKDINSSNVLLDSDLRAKIANFAMARPAEGQE 496
+ VA G+ +L S +H+D+ + N+LL KI +F +AR + +
Sbjct: 159 DLEDLLSFSYQVAKGMAFLASKNC---IHRDLAARNILLTHGRITKICDFGLARDIK-ND 214
Query: 497 GEFALTRHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLILEMLT 540
+ + + +MAPE + N + + + DV+++G+ + E+ +
Sbjct: 215 SNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFS 258
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 57/225 (25%), Positives = 97/225 (43%), Gaps = 39/225 (17%)
Query: 344 KELQSATDNFSFTCRIQGSVYRGKINGGFAAIKKVNGDVSKEIALLNK-----------I 392
KE+Q ++F I + RG G A +K N + + +LNK
Sbjct: 67 KEMQLHREDFE----IIKVIGRGAF-GEVAVVKMKNTERIYAMKILNKWEMLKRAETACF 121
Query: 393 NHSNLIILSGVCF----------NEGNCYLVYEYAVNGTLSDWVFSNKNEGKYLDWKQRI 442
++++G C +E + YLV +Y V G L +K E K + R
Sbjct: 122 REERDVLVNGDCQWITALHYAFQDENHLYLVMDYYVGGDLL--TLLSKFEDKLPEDMARF 179
Query: 443 QIALDVATGLNYLHSFTNPPHVHKDINSSNVLLDSDLRAKIANFAMARPAEGQEGEFALT 502
I ++ ++ +H +VH+DI NVLLD + ++A+F + + +
Sbjct: 180 YIG-EMVLAIDSIHQLH---YVHRDIKPDNVLLDVNGHIRLADFGSC--LKMNDDGTVQS 233
Query: 503 RHIVGTKGYMAPEYL---ENGL--VSTKLDVYAFGVLILEMLTGK 542
VGT Y++PE L E+G+ + D ++ GV + EML G+
Sbjct: 234 SVAVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGE 278
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 79/187 (42%), Gaps = 19/187 (10%)
Query: 362 SVYRGKINGGFAAIKKVNGDVSKEIALLNKINHSNLIILSGVCFNEGN-CYLVYEYAVNG 420
VY K+ F IK+ + E + +S ++ F + Y+V EY G
Sbjct: 100 KVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGG 159
Query: 421 TLSDWVFSNKNEGKYLDWKQRIQIALDVATGLNYLHSFTNPPHVHKDINSSNVLLDSDLR 480
L + + + K+ R A +V L+ +HS +H+D+ N+LLD
Sbjct: 160 DLVNLMSNYDVPEKW----ARFYTA-EVVLALDAIHSMG---FIHRDVKPDNMLLDKSGH 211
Query: 481 AKIANFA--MARPAEGQEGEFALTRHIVGTKGYMAPEYLE----NGLVSTKLDVYAFGVL 534
K+A+F M EG VGT Y++PE L+ +G + D ++ GV
Sbjct: 212 LKLADFGTCMKMNKEG----MVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVF 267
Query: 535 ILEMLTG 541
+ EML G
Sbjct: 268 LYEMLVG 274
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 38/164 (23%), Positives = 73/164 (44%), Gaps = 22/164 (13%)
Query: 393 NHSNLIILSGVCFNEGNCYLVYEYAVNGTLSDWVFSNKNEGKYLDWKQRIQI-------- 444
NH N++ L G C G ++ EY G L + F + ++ K I
Sbjct: 85 NHMNIVNLLGACTIGGPTLVITEYCCYGDLLN--FLRRKRDSFICSKTSPAIMEDDELAL 142
Query: 445 --------ALDVATGLNYLHSFTNPPHVHKDINSSNVLLDSDLRAKIANFAMARPAEGQE 496
+ VA G+ +L S +H+D+ + N+LL KI +F +AR + +
Sbjct: 143 DLEDLLSFSYQVAKGMAFLASKNC---IHRDLAARNILLTHGRITKICDFGLARDIK-ND 198
Query: 497 GEFALTRHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLILEMLT 540
+ + + +MAPE + N + + + DV+++G+ + E+ +
Sbjct: 199 SNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFS 242
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 57/225 (25%), Positives = 97/225 (43%), Gaps = 39/225 (17%)
Query: 344 KELQSATDNFSFTCRIQGSVYRGKINGGFAAIKKVNGDVSKEIALLNK-----------I 392
KE+Q ++F I + RG G A +K N + + +LNK
Sbjct: 83 KEMQLHREDFE----IIKVIGRGAF-GEVAVVKMKNTERIYAMKILNKWEMLKRAETACF 137
Query: 393 NHSNLIILSGVCF----------NEGNCYLVYEYAVNGTLSDWVFSNKNEGKYLDWKQRI 442
++++G C +E + YLV +Y V G L +K E K + R
Sbjct: 138 REERDVLVNGDCQWITALHYAFQDENHLYLVMDYYVGGDLL--TLLSKFEDKLPEDMARF 195
Query: 443 QIALDVATGLNYLHSFTNPPHVHKDINSSNVLLDSDLRAKIANFAMARPAEGQEGEFALT 502
I ++ ++ +H +VH+DI NVLLD + ++A+F + + +
Sbjct: 196 YIG-EMVLAIDSIHQLH---YVHRDIKPDNVLLDVNGHIRLADFGSC--LKMNDDGTVQS 249
Query: 503 RHIVGTKGYMAPEYL---ENGL--VSTKLDVYAFGVLILEMLTGK 542
VGT Y++PE L E+G+ + D ++ GV + EML G+
Sbjct: 250 SVAVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGE 294
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 38/164 (23%), Positives = 73/164 (44%), Gaps = 22/164 (13%)
Query: 393 NHSNLIILSGVCFNEGNCYLVYEYAVNGTLSDWVFSNKNEGKYLDWKQRIQI-------- 444
NH N++ L G C G ++ EY G L + F + ++ K I
Sbjct: 108 NHMNIVNLLGACTIGGPTLVITEYCCYGDLLN--FLRRKRDSFICSKTSPAIMEDDELAL 165
Query: 445 --------ALDVATGLNYLHSFTNPPHVHKDINSSNVLLDSDLRAKIANFAMARPAEGQE 496
+ VA G+ +L S +H+D+ + N+LL KI +F +AR + +
Sbjct: 166 DLEDLLSFSYQVAKGMAFLASKNC---IHRDLAARNILLTHGRITKICDFGLARDIK-ND 221
Query: 497 GEFALTRHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLILEMLT 540
+ + + +MAPE + N + + + DV+++G+ + E+ +
Sbjct: 222 SNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFS 265
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 38/164 (23%), Positives = 73/164 (44%), Gaps = 22/164 (13%)
Query: 393 NHSNLIILSGVCFNEGNCYLVYEYAVNGTLSDWVFSNKNEGKYLDWKQRIQI-------- 444
NH N++ L G C G ++ EY G L + F + ++ K I
Sbjct: 103 NHMNIVNLLGACTIGGPTLVITEYCCYGDLLN--FLRRKRDSFICSKTSPAIMEDDELAL 160
Query: 445 --------ALDVATGLNYLHSFTNPPHVHKDINSSNVLLDSDLRAKIANFAMARPAEGQE 496
+ VA G+ +L S +H+D+ + N+LL KI +F +AR + +
Sbjct: 161 DLEDLLSFSYQVAKGMAFLASKNC---IHRDLAARNILLTHGRITKICDFGLARDIK-ND 216
Query: 497 GEFALTRHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLILEMLT 540
+ + + +MAPE + N + + + DV+++G+ + E+ +
Sbjct: 217 SNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFS 260
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 38/164 (23%), Positives = 73/164 (44%), Gaps = 22/164 (13%)
Query: 393 NHSNLIILSGVCFNEGNCYLVYEYAVNGTLSDWVFSNKNEGKYLDWKQRIQI-------- 444
NH N++ L G C G ++ EY G L + F + ++ K I
Sbjct: 108 NHMNIVNLLGACTIGGPTLVITEYCCYGDLLN--FLRRKRDSFICSKTSPAIMEDDELAL 165
Query: 445 --------ALDVATGLNYLHSFTNPPHVHKDINSSNVLLDSDLRAKIANFAMARPAEGQE 496
+ VA G+ +L S +H+D+ + N+LL KI +F +AR + +
Sbjct: 166 DLEDLLSFSYQVAKGMAFLASKNC---IHRDLAARNILLTHGRITKICDFGLARHIK-ND 221
Query: 497 GEFALTRHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLILEMLT 540
+ + + +MAPE + N + + + DV+++G+ + E+ +
Sbjct: 222 SNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFS 265
>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1
pdb|3FPQ|B Chain B, Crystal Structure Of The Kinase Domain Of Wnk1
Length = 290
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 45/94 (47%), Gaps = 8/94 (8%)
Query: 448 VATGLNYLHSFTNPPHVHKDINSSNVLLDSDL-RAKIANFAMARPAEGQEGEFALTRHIV 506
+ GL +LH+ T PP +H+D+ N+ + KI + +A + + ++
Sbjct: 138 ILKGLQFLHTRT-PPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKRA-----SFAKAVI 191
Query: 507 GTKGYMAPEYLENGLVSTKLDVYAFGVLILEMLT 540
GT + APE E + +DVYAFG LE T
Sbjct: 192 GTPEFXAPEXYEEKYDES-VDVYAFGXCXLEXAT 224
>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A
Novel Pyrrolopyrimidine Inhibitor
Length = 359
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 46/196 (23%), Positives = 84/196 (42%), Gaps = 32/196 (16%)
Query: 435 YLDWKQRIQIALDVATGLNYLHSFTNPPHVHKDINSSNVLLDSDLRAKIANFAMAR---- 490
+L + I + VA G+ +L S +H+D+ + N+LL KI +F +AR
Sbjct: 189 FLTLEHLICYSFQVAKGMEFLASRKC---IHRDLAARNILLSEKNVVKICDFGLARDIYK 245
Query: 491 -PAEGQEGEFALTRHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLILEMLTGKEAAALHA 549
P ++G+ L +MAPE + + + + + DV++FGVL+ E+ + +
Sbjct: 246 DPDYVRKGDARLPLK------WMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGV 299
Query: 550 EENNMHLSDVLNAVLTKEDGEESLRHFIDPTLQGNYPLELALLVIRLIDACLKKDPTDRP 609
+ + EE R + T + ++D C +P+ RP
Sbjct: 300 KID-----------------EEFCRRLKEGTRMRAPDYTTPEMYQTMLD-CWHGEPSQRP 341
Query: 610 TMYEIEHSLSNILNAS 625
T E+ L N+L A+
Sbjct: 342 TFSELVEHLGNLLQAN 357
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 51/222 (22%), Positives = 97/222 (43%), Gaps = 39/222 (17%)
Query: 402 GVCFNEGNCYLVYEYAVNGTLSDWVFSNKNEGKYLDWKQRIQIALDVATGLNYLHSFTNP 461
G F EG+ ++ E ++ +L + ++G+ + +IA+ + L +LHS +
Sbjct: 73 GALFREGDVWICMEL-MDTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKLSV 131
Query: 462 PHVHKDINSSNVLLDSDLRAKIANFAMARPAEGQEGEFALTRHIVGTKGYMAPEYLENGL 521
+H+D+ SNVL+++ + K+ +F ++ G + G K YMAPE + L
Sbjct: 132 --IHRDVKPSNVLINALGQVKMCDFGIS----GYLVDDVAKDIDAGCKPYMAPERINPEL 185
Query: 522 ----VSTKLDVYAFGVLILEMLTGKEAAALHAEENN-----MHLSDVLNAVLTKEDGEES 572
S K D+++ G+ ++E+ A L ++ L V+ + ++
Sbjct: 186 NQKGYSVKSDIWSLGITMIEL------AILRFPYDSWGTPFQQLKQVVEEPSPQLPADKF 239
Query: 573 LRHFIDPTLQGNYPLELALLVIRLIDACLKKDPTDRPTMYEI 614
F+D T Q CLKK+ +RPT E+
Sbjct: 240 SAEFVDFTSQ-----------------CLKKNSKERPTYPEL 264
>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With
Compound A
Length = 356
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 46/196 (23%), Positives = 84/196 (42%), Gaps = 32/196 (16%)
Query: 435 YLDWKQRIQIALDVATGLNYLHSFTNPPHVHKDINSSNVLLDSDLRAKIANFAMAR---- 490
+L + I + VA G+ +L S +H+D+ + N+LL KI +F +AR
Sbjct: 187 FLTLEHLICYSFQVAKGMEFLASRKC---IHRDLAARNILLSEKNVVKICDFGLARDIYK 243
Query: 491 -PAEGQEGEFALTRHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLILEMLTGKEAAALHA 549
P ++G+ L +MAPE + + + + + DV++FGVL+ E+ + +
Sbjct: 244 DPDYVRKGDARLPLK------WMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGV 297
Query: 550 EENNMHLSDVLNAVLTKEDGEESLRHFIDPTLQGNYPLELALLVIRLIDACLKKDPTDRP 609
+ + EE R + T + ++D C +P+ RP
Sbjct: 298 KID-----------------EEFCRRLKEGTRMRAPDYTTPEMYQTMLD-CWHGEPSQRP 339
Query: 610 TMYEIEHSLSNILNAS 625
T E+ L N+L A+
Sbjct: 340 TFSELVEHLGNLLQAN 355
>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Back Pocket Binder
Length = 368
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 46/196 (23%), Positives = 84/196 (42%), Gaps = 32/196 (16%)
Query: 435 YLDWKQRIQIALDVATGLNYLHSFTNPPHVHKDINSSNVLLDSDLRAKIANFAMAR---- 490
+L + I + VA G+ +L S +H+D+ + N+LL KI +F +AR
Sbjct: 196 FLTLEHLICYSFQVAKGMEFLASRKC---IHRDLAARNILLSEKNVVKICDFGLARDIYK 252
Query: 491 -PAEGQEGEFALTRHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLILEMLTGKEAAALHA 549
P ++G+ L +MAPE + + + + + DV++FGVL+ E+ + +
Sbjct: 253 DPDYVRKGDARLPLK------WMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGV 306
Query: 550 EENNMHLSDVLNAVLTKEDGEESLRHFIDPTLQGNYPLELALLVIRLIDACLKKDPTDRP 609
+ + EE R + T + ++D C +P+ RP
Sbjct: 307 KID-----------------EEFCRRLKEGTRMRAPDYTTPEMYQTMLD-CWHGEPSQRP 348
Query: 610 TMYEIEHSLSNILNAS 625
T E+ L N+L A+
Sbjct: 349 TFSELVEHLGNLLQAN 364
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 45/185 (24%), Positives = 77/185 (41%), Gaps = 15/185 (8%)
Query: 362 SVYRGKINGGFAAIKKVNGDVSKEIALLNKINHSNLIILSGVCFNEGN-CYLVYEYAVNG 420
VY K+ F IK+ + E + +S ++ F + Y+V EY G
Sbjct: 101 KVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFCAFQDDKYLYMVMEYMPGG 160
Query: 421 TLSDWVFSNKNEGKYLDWKQRIQIALDVATGLNYLHSFTNPPHVHKDINSSNVLLDSDLR 480
L + + + K+ + +V L+ +HS +H+D+ N+LLD
Sbjct: 161 DLVNLMSNYDVPEKWAKF-----YTAEVVLALDAIHSMG---LIHRDVKPDNMLLDKHGH 212
Query: 481 AKIANFAMARPAEGQEGEFALTRHIVGTKGYMAPEYLE----NGLVSTKLDVYAFGVLIL 536
K+A+F + E VGT Y++PE L+ +G + D ++ GV +
Sbjct: 213 LKLADFGTCMKMD--ETGMVHCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLF 270
Query: 537 EMLTG 541
EML G
Sbjct: 271 EMLVG 275
>pdb|3RP9|A Chain A, Crystal Structure Of The Apo Mapk From Toxoplasma Gondii,
25.M01780 Or Tgme49_007820
Length = 458
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 55/229 (24%), Positives = 97/229 (42%), Gaps = 56/229 (24%)
Query: 367 KINGGFAAIKKV---------NGDVSKEIALLNKINHSNLIILSGVCFNEG-----NCYL 412
K+ AIKK+ + +EIA+LN++NH +++ + + + Y+
Sbjct: 75 KLEKRVVAIKKILRVFEDLIDCKRILREIAILNRLNHDHVVKVLDIVIPKDVEKFDELYV 134
Query: 413 VYEYAVNGTLSDWVFSNK-NEGKYLDWKQRIQIALDVATGLNYLHSFTNPPHVHKDINSS 471
V E ++D F YL + ++ G+ Y+HS +H+D+ +
Sbjct: 135 VLE------IADSDFKKLFRTPVYLTELHIKTLLYNLLVGVKYVHSAGI---LHRDLKPA 185
Query: 472 NVLLDSDLRAKIANFAMAR------------PAEGQEGEF-------------ALTRHIV 506
N L++ D K+ +F +AR P +E + LT H+V
Sbjct: 186 NCLVNQDCSVKVCDFGLARTVDYPENGNSQLPISPREDDMNLVTFPHTKNLKRQLTGHVV 245
Query: 507 GTKGYMAPEYL---ENGLVSTKLDVYAFGVLILEMLTG-KEAAALHAEE 551
T+ Y APE + EN + +DV++ G + E+L KE A HA+
Sbjct: 246 -TRWYRAPELILLQEN--YTEAIDVWSIGCIFAELLNMIKENVAYHADR 291
>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
pdb|1Y6B|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
Length = 366
Score = 45.8 bits (107), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 46/196 (23%), Positives = 84/196 (42%), Gaps = 32/196 (16%)
Query: 435 YLDWKQRIQIALDVATGLNYLHSFTNPPHVHKDINSSNVLLDSDLRAKIANFAMAR---- 490
+L + I + VA G+ +L S +H+D+ + N+LL KI +F +AR
Sbjct: 194 FLTLEHLICYSFQVAKGMEFLASRKC---IHRDLAARNILLSEKNVVKICDFGLARDIYK 250
Query: 491 -PAEGQEGEFALTRHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLILEMLTGKEAAALHA 549
P ++G+ L +MAPE + + + + + DV++FGVL+ E+ + +
Sbjct: 251 DPDYVRKGDARLPLK------WMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGV 304
Query: 550 EENNMHLSDVLNAVLTKEDGEESLRHFIDPTLQGNYPLELALLVIRLIDACLKKDPTDRP 609
+ + EE R + T + ++D C +P+ RP
Sbjct: 305 KID-----------------EEFCRRLKEGTRMRAPDYTTPEMYQTMLD-CWHGEPSQRP 346
Query: 610 TMYEIEHSLSNILNAS 625
T E+ L N+L A+
Sbjct: 347 TFSELVEHLGNLLQAN 362
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 61/233 (26%), Positives = 106/233 (45%), Gaps = 38/233 (16%)
Query: 361 GSVY--RGKINGGFAAIKKVNGDVSKE---------IALLNKINHSNLIILSGVC----- 404
G V+ R + G A+KKV + KE I +L + H N++ L +C
Sbjct: 32 GEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKAS 91
Query: 405 -FN--EGNCYLVY---EYAVNGTLSDWVFSNKNEGKYLDWKQRIQIALDVATGLNYLHSF 458
+N +G+ YLV+ E+ + G LS+ + + + K+ +Q+ L+ GL Y+H
Sbjct: 92 PYNRCKGSIYLVFDFCEHDLAGLLSNVLV----KFTLSEIKRVMQMLLN---GLYYIHRN 144
Query: 459 TNPPHVHKDINSSNVLLDSDLRAKIANFAMARP---AEGQEGEFALTRHIVGTKGYMAPE 515
+H+D+ ++NVL+ D K+A+F +AR A+ + R V T Y PE
Sbjct: 145 KI---LHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNR--VVTLWYRPPE 199
Query: 516 YLENGL-VSTKLDVYAFGVLILEMLTGKEAAALHAEENNMHLSDVLNAVLTKE 567
L +D++ G ++ EM T + E++ + L L +T E
Sbjct: 200 LLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGSITPE 252
>pdb|2Y4I|B Chain B, Ksr2-Mek1 Heterodimer
Length = 319
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 35/136 (25%), Positives = 62/136 (45%), Gaps = 15/136 (11%)
Query: 361 GSVYRGKINGGFAA----IKKVNGD----VSKEIALLNKINHSNLIILSGVCFNEGNCYL 412
G VY G+ +G A I++ N D +E+ + H N+++ G C + + +
Sbjct: 47 GQVYHGRWHGEVAIRLIDIERDNEDQLKAFKREVMAYRQTRHENVVLFMGACMSPPHLAI 106
Query: 413 VYEYAVNGTLSDWVFSNKNEGKYLDWKQRIQIALDVATGLNYLHSFTNPPHVHKDINSSN 472
+ TL V ++ LD + QIA ++ G+ YLH+ +HKD+ S N
Sbjct: 107 ITSLCKGRTLYSVV---RDAKIVLDVNKTRQIAQEIVKGMGYLHA---KGILHKDLKSKN 160
Query: 473 VLLDSDLRAKIANFAM 488
V D+ + I +F +
Sbjct: 161 VFYDNG-KVVITDFGL 175
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 49/202 (24%), Positives = 88/202 (43%), Gaps = 40/202 (19%)
Query: 367 KINGGFAAIKKVNG--------DVSKEIALLNKINHSNLIILSGVC-------FNEGNCY 411
K G AIKK+ +EI +L H N+I + + FNE Y
Sbjct: 33 KPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHENIITIFNIQRPDSFENFNE--VY 90
Query: 412 LVYEYA---VNGTLSDWVFSNKNEGKYLDWKQRIQIALDVATGLNYLHSFTNPPHVHKDI 468
++ E ++ +S + S+ + ++ R A+ V G N +H+D+
Sbjct: 91 IIQELMQTDLHRVISTQMLSDDHIQYFIYQTLR---AVKVLHGSNV---------IHRDL 138
Query: 469 NSSNVLLDSDLRAKIANFAMAR-----PAEGQE--GEFALTRHIVGTKGYMAPE-YLENG 520
SN+L++S+ K+ +F +AR A+ E G+ + V T+ Y APE L +
Sbjct: 139 KPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMTEXVATRWYRAPEVMLTSA 198
Query: 521 LVSTKLDVYAFGVLILEMLTGK 542
S +DV++ G ++ E+ +
Sbjct: 199 KYSRAMDVWSCGCILAELFLRR 220
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 49/202 (24%), Positives = 88/202 (43%), Gaps = 40/202 (19%)
Query: 367 KINGGFAAIKKVNG--------DVSKEIALLNKINHSNLIILSGVC-------FNEGNCY 411
K G AIKK+ +EI +L H N+I + + FNE Y
Sbjct: 33 KPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHENIITIFNIQRPDSFENFNE--VY 90
Query: 412 LVYEYA---VNGTLSDWVFSNKNEGKYLDWKQRIQIALDVATGLNYLHSFTNPPHVHKDI 468
++ E ++ +S + S+ + ++ R A+ V G N +H+D+
Sbjct: 91 IIQELMQTDLHRVISTQMLSDDHIQYFIYQTLR---AVKVLHGSNV---------IHRDL 138
Query: 469 NSSNVLLDSDLRAKIANFAMAR-----PAEGQE--GEFALTRHIVGTKGYMAPE-YLENG 520
SN+L++S+ K+ +F +AR A+ E G+ + V T+ Y APE L +
Sbjct: 139 KPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMVEFVATRWYRAPEVMLTSA 198
Query: 521 LVSTKLDVYAFGVLILEMLTGK 542
S +DV++ G ++ E+ +
Sbjct: 199 KYSRAMDVWSCGCILAELFLRR 220
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 61/233 (26%), Positives = 106/233 (45%), Gaps = 38/233 (16%)
Query: 361 GSVY--RGKINGGFAAIKKVNGDVSKE---------IALLNKINHSNLIILSGVC----- 404
G V+ R + G A+KKV + KE I +L + H N++ L +C
Sbjct: 31 GEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKAS 90
Query: 405 -FN--EGNCYLVY---EYAVNGTLSDWVFSNKNEGKYLDWKQRIQIALDVATGLNYLHSF 458
+N +G+ YLV+ E+ + G LS+ + + + K+ +Q+ L+ GL Y+H
Sbjct: 91 PYNRCKGSIYLVFDFCEHDLAGLLSNVLV----KFTLSEIKRVMQMLLN---GLYYIHRN 143
Query: 459 TNPPHVHKDINSSNVLLDSDLRAKIANFAMARP---AEGQEGEFALTRHIVGTKGYMAPE 515
+H+D+ ++NVL+ D K+A+F +AR A+ + R V T Y PE
Sbjct: 144 KI---LHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNR--VVTLWYRPPE 198
Query: 516 YLENGL-VSTKLDVYAFGVLILEMLTGKEAAALHAEENNMHLSDVLNAVLTKE 567
L +D++ G ++ EM T + E++ + L L +T E
Sbjct: 199 LLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGSITPE 251
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 61/233 (26%), Positives = 106/233 (45%), Gaps = 38/233 (16%)
Query: 361 GSVY--RGKINGGFAAIKKVNGDVSKE---------IALLNKINHSNLIILSGVC----- 404
G V+ R + G A+KKV + KE I +L + H N++ L +C
Sbjct: 32 GEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKAS 91
Query: 405 -FN--EGNCYLVY---EYAVNGTLSDWVFSNKNEGKYLDWKQRIQIALDVATGLNYLHSF 458
+N +G+ YLV+ E+ + G LS+ + + + K+ +Q+ L+ GL Y+H
Sbjct: 92 PYNRCKGSIYLVFDFCEHDLAGLLSNVLV----KFTLSEIKRVMQMLLN---GLYYIHRN 144
Query: 459 TNPPHVHKDINSSNVLLDSDLRAKIANFAMARP---AEGQEGEFALTRHIVGTKGYMAPE 515
+H+D+ ++NVL+ D K+A+F +AR A+ + R V T Y PE
Sbjct: 145 KI---LHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNR--VVTLWYRPPE 199
Query: 516 YLENGL-VSTKLDVYAFGVLILEMLTGKEAAALHAEENNMHLSDVLNAVLTKE 567
L +D++ G ++ EM T + E++ + L L +T E
Sbjct: 200 LLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGSITPE 252
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 49/202 (24%), Positives = 88/202 (43%), Gaps = 40/202 (19%)
Query: 367 KINGGFAAIKKVNG--------DVSKEIALLNKINHSNLIILSGVC-------FNEGNCY 411
K G AIKK+ +EI +L H N+I + + FNE Y
Sbjct: 33 KPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHENIITIFNIQRPDSFENFNE--VY 90
Query: 412 LVYEYA---VNGTLSDWVFSNKNEGKYLDWKQRIQIALDVATGLNYLHSFTNPPHVHKDI 468
++ E ++ +S + S+ + ++ R A+ V G N +H+D+
Sbjct: 91 IIQELMQTDLHRVISTQMLSDDHIQYFIYQTLR---AVKVLHGSNV---------IHRDL 138
Query: 469 NSSNVLLDSDLRAKIANFAMAR-----PAEGQE--GEFALTRHIVGTKGYMAPE-YLENG 520
SN+L++S+ K+ +F +AR A+ E G+ + V T+ Y APE L +
Sbjct: 139 KPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMTEYVATRWYRAPEVMLTSA 198
Query: 521 LVSTKLDVYAFGVLILEMLTGK 542
S +DV++ G ++ E+ +
Sbjct: 199 KYSRAMDVWSCGCILAELFLRR 220
>pdb|2VD5|A Chain A, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
pdb|2VD5|B Chain B, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
Length = 412
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 62/231 (26%), Positives = 95/231 (41%), Gaps = 24/231 (10%)
Query: 361 GSVYRGKINGGFAAIKKVNGDVS---KEIALLNKINHSNLIILSGVCFNEGNCYLVYEYA 417
G VY KI + +K+ G+VS +E +L + + L +E YLV EY
Sbjct: 86 GQVYAMKIMNKWDMLKR--GEVSCFREERDVLVNGDRRWITQLHFAFQDENYLYLVMEYY 143
Query: 418 VNGTLSDWVFSNKNEGKYLDWKQRIQIALDVATGLNYLHSFTNPPHVHKDINSSNVLLDS 477
V G L +K + R +A ++ ++ +H +VH+DI N+LLD
Sbjct: 144 VGGDLL--TLLSKFGERIPAEMARFYLA-EIVMAIDSVHRLG---YVHRDIKPDNILLDR 197
Query: 478 DLRAKIANFAMARPAEGQEGEFALTRHIVGTKGYMAPEYLE-------NGLVSTKLDVYA 530
++A+F +L VGT Y++PE L+ G + D +A
Sbjct: 198 CGHIRLADFGSCLKLRADGTVRSLV--AVGTPDYLSPEILQAVGGGPGTGSYGPECDWWA 255
Query: 531 FGVLILEMLTGKEA--AALHAEENN--MHLSDVLNAVLTKEDGEESLRHFI 577
GV EM G+ A AE +H + L+ L E E R FI
Sbjct: 256 LGVFAYEMFYGQTPFYADSTAETYGKIVHYKEHLSLPLVDEGVPEEARDFI 306
>pdb|3UIB|A Chain A, Map Kinase Lmampk10 From Leishmania Major In Complex With
Sb203580
Length = 362
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 75/163 (46%), Gaps = 9/163 (5%)
Query: 382 VSKEIALLNKINHSNLIILSGVCFNEGNCYLVYEYAVNGTLSDWVFSNKNEGKYLDWKQR 441
V +EI LLN +H N++ L + + + Y V + + ++ + + Q
Sbjct: 76 VLREIRLLNHFHHPNILGLRDIFVHFEEPAMHKLYLVTELMRTDLAQVIHDQRIVISPQH 135
Query: 442 IQIAL-DVATGLNYLHSFTNPPHVHKDINSSNVLLDSDLRAKIANFAMARPAEGQEGEFA 500
IQ + + GL+ LH VH+D++ N+LL + I +F +AR ++ A
Sbjct: 136 IQYFMYHILLGLHVLHEAGV---VHRDLHPGNILLADNNDITICDFNLAR----EDTADA 188
Query: 501 LTRHIVGTKGYMAPEYLENGLVSTKL-DVYAFGVLILEMLTGK 542
H V + Y APE + TKL D+++ G ++ EM K
Sbjct: 189 NKTHYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRK 231
>pdb|3PG1|A Chain A, Map Kinase Lmampk10 From Leishmania Major (1.95 Angs
Resolution)
Length = 362
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 75/163 (46%), Gaps = 9/163 (5%)
Query: 382 VSKEIALLNKINHSNLIILSGVCFNEGNCYLVYEYAVNGTLSDWVFSNKNEGKYLDWKQR 441
V +EI LLN +H N++ L + + + Y V + + ++ + + Q
Sbjct: 76 VLREIRLLNHFHHPNILGLRDIFVHFEEPAMHKLYLVTELMRTDLAQVIHDQRIVISPQH 135
Query: 442 IQIAL-DVATGLNYLHSFTNPPHVHKDINSSNVLLDSDLRAKIANFAMARPAEGQEGEFA 500
IQ + + GL+ LH VH+D++ N+LL + I +F +AR ++ A
Sbjct: 136 IQYFMYHILLGLHVLHEAGV---VHRDLHPGNILLADNNDITICDFNLAR----EDTADA 188
Query: 501 LTRHIVGTKGYMAPEYLENGLVSTKL-DVYAFGVLILEMLTGK 542
H V + Y APE + TKL D+++ G ++ EM K
Sbjct: 189 NKTHYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRK 231
>pdb|3P23|A Chain A, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|B Chain B, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|C Chain C, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|D Chain D, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
Length = 432
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 40/165 (24%), Positives = 76/165 (46%), Gaps = 17/165 (10%)
Query: 363 VYRGKINGGFAAIKKVNGD----VSKEIALLNKIN-HSNLIILSGVCFNEGNCYLVYEYA 417
VYRG + A+K++ + +E+ LL + + H N+I + Y+ E
Sbjct: 41 VYRGMFDNRDVAVKRILPECFSFADREVQLLRESDEHPNVIRYFCTEKDRQFQYIAIELC 100
Query: 418 VNGTLSDWVFSNKNEGKYLDWKQRIQIALDVATGLNYLHSFTNPPHVHKDINSSNVLLD- 476
TL ++V + + +L + I + +GL +LHS VH+D+ N+L+
Sbjct: 101 A-ATLQEYV--EQKDFAHLGLEP-ITLLQQTTSGLAHLHSLNI---VHRDLKPHNILISM 153
Query: 477 ----SDLRAKIANFAMARPAEGQEGEFALTRHIVGTKGYMAPEYL 517
++A I++F + + F+ + GT+G++APE L
Sbjct: 154 PNAHGKIKAMISDFGLCKKLAVGRHSFSRRSGVPGTEGWIAPEML 198
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 57/264 (21%), Positives = 110/264 (41%), Gaps = 48/264 (18%)
Query: 369 NGGFAAIKKVNGDVS--KEIALLNKINHSN-------LIILSGVCFNEGNCYLVYEYAVN 419
+G A+K++ V+ ++ LL ++ S + G F EG+ ++ E +
Sbjct: 58 SGQIXAVKRIRATVNSQEQKRLLXDLDISXRTVDCPFTVTFYGALFREGDVWICXELX-D 116
Query: 420 GTLSDWVFSNKNEGKYLDWKQRIQIALDVATGLNYLHSFTNPPHVHKDINSSNVLLDSDL 479
+L + ++G+ + +IA+ + L +LHS + +H+D+ SNVL+++
Sbjct: 117 TSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKLS--VIHRDVKPSNVLINALG 174
Query: 480 RAKIANFAMARPAEGQEGEFALTRHIVGTKGYMAPEYLENGL----VSTKLDVYAFGVLI 535
+ K +F ++ G + G K Y APE + L S K D+++ G+
Sbjct: 175 QVKXCDFGIS----GYLVDDVAKDIDAGCKPYXAPERINPELNQKGYSVKSDIWSLGITX 230
Query: 536 LEMLTGKEAAALHAEENN-----MHLSDVLNAVLTKEDGEESLRHFIDPTLQGNYPLELA 590
+E+ A L ++ L V+ + ++ F+D T Q
Sbjct: 231 IEL------AILRFPYDSWGTPFQQLKQVVEEPSPQLPADKFSAEFVDFTSQ-------- 276
Query: 591 LLVIRLIDACLKKDPTDRPTMYEI 614
CLKK+ +RPT E+
Sbjct: 277 ---------CLKKNSKERPTYPEL 291
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 60/233 (25%), Positives = 105/233 (45%), Gaps = 38/233 (16%)
Query: 361 GSVY--RGKINGGFAAIKKVNGDVSKE---------IALLNKINHSNLIILSGVC----- 404
G V+ R + G A+KKV + KE I +L + H N++ L +C
Sbjct: 32 GEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKAS 91
Query: 405 -FN--EGNCYLVY---EYAVNGTLSDWVFSNKNEGKYLDWKQRIQIALDVATGLNYLHSF 458
+N + + YLV+ E+ + G LS+ + + + K+ +Q+ L+ GL Y+H
Sbjct: 92 PYNRCKASIYLVFDFCEHDLAGLLSNVLV----KFTLSEIKRVMQMLLN---GLYYIHRN 144
Query: 459 TNPPHVHKDINSSNVLLDSDLRAKIANFAMARP---AEGQEGEFALTRHIVGTKGYMAPE 515
+H+D+ ++NVL+ D K+A+F +AR A+ + R V T Y PE
Sbjct: 145 KI---LHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNR--VVTLWYRPPE 199
Query: 516 YLENGL-VSTKLDVYAFGVLILEMLTGKEAAALHAEENNMHLSDVLNAVLTKE 567
L +D++ G ++ EM T + E++ + L L +T E
Sbjct: 200 LLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGSITPE 252
>pdb|3H9F|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrimido-Diazepin Ligand
Length = 313
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 60/243 (24%), Positives = 102/243 (41%), Gaps = 41/243 (16%)
Query: 385 EIALLNKIN-HSNLII-LSGVCFNEGNCYLVYEYAVNGTLSDWVFSNKNEGKYLDWKQRI 442
EIA LNK+ HS+ II L + Y+V E N L+ W+ K+ +D +R
Sbjct: 76 EIAYLNKLQQHSDKIIRLYDYEITDQYIYMVMECG-NIDLNSWLKKKKS----IDPWERK 130
Query: 443 QIALDVATGLNYLHSFTNPPHVHKDINSSNVLLDSDLRAKIANFAMARPAEGQEGEFALT 502
++ ++ +H VH D+ +N L+ D K+ +F +A + + +
Sbjct: 131 SYWKNMLEAVHTIHQHGI---VHSDLKPANFLI-VDGMLKLIDFGIANQMQP-DXXXVVK 185
Query: 503 RHIVGTKGYMAPEYL-------ENGLVSTKL----DVYAFGVLILEMLTGKEAAALHAEE 551
VGT YM PE + ENG +K+ DV++ G ++ M GK
Sbjct: 186 DSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTP------- 238
Query: 552 NNMHLSDVLNAVLTKEDGEESLRHFIDPTLQGNYPLELALLVIRLIDACLKKDPTDRPTM 611
++N + L IDP + +P + ++ CLK+DP R ++
Sbjct: 239 ----FQQIINQI-------SKLHAIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISI 287
Query: 612 YEI 614
E+
Sbjct: 288 PEL 290
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 40/161 (24%), Positives = 70/161 (43%), Gaps = 27/161 (16%)
Query: 464 VHKDINSSNVLLDSDLRAKIANFAMARPAEGQEGEFALTRHIVGTKGYMAPEYLE----- 518
+H+D+ SN+LLD + K+ +F ++ G+ + G YMAPE ++
Sbjct: 147 IHRDVKPSNILLDERGQIKLCDFGIS----GRLVDDKAKDRSAGCAAYMAPERIDPPDPT 202
Query: 519 NGLVSTKLDVYAFGVLILEMLTGKEAAALHAEENNMHLSDVLNAVLTKEDGEESLRHFID 578
+ DV++ G+ ++E+ TG+ +N +VL VL +E
Sbjct: 203 KPDYDIRADVWSLGISLVELATGQ-----FPYKNCKTDFEVLTKVLQEE----------P 247
Query: 579 PTLQGNYPLELALLVIRLIDACLKKDPTDRPTMYE-IEHSL 618
P L G+ + + + CL KD RP + +EHS
Sbjct: 248 PLLPGH--MGFSGDFQSFVKDCLTKDHRKRPKYNKLLEHSF 286
>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain
pdb|2HW6|B Chain B, Crystal Structure Of Mnk1 Catalytic Domain
Length = 307
Score = 42.7 bits (99), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 34/143 (23%), Positives = 68/143 (47%), Gaps = 19/143 (13%)
Query: 411 YLVYEYAVNGTLSDWVFSNKNEGKYLDWKQRIQIALDVATGLNYLHSFTNPPHVHKDINS 470
YLV+E G+ + ++ + K+ + ++ ++ DVA L++LH+ H+D+
Sbjct: 87 YLVFEKLQGGS----ILAHIQKQKHFNEREASRVVRDVAAALDFLHT---KGIAHRDLKP 139
Query: 471 SNVLLDSDLR---AKIANFAMARPAEGQEGEFALTRHIV----GTKGYMAPEYLE----- 518
N+L +S + KI +F + + +T + G+ YMAPE +E
Sbjct: 140 ENILCESPEKVSPVKICDFDLGSGMKLNNSCTPITTPELTTPCGSAEYMAPEVVEVFTDQ 199
Query: 519 NGLVSTKLDVYAFGVLILEMLTG 541
+ D+++ GV++ ML+G
Sbjct: 200 ATFYDKRCDLWSLGVVLYIMLSG 222
>pdb|3DBQ|A Chain A, Crystal Structure Of Ttk Kinase Domain
Length = 343
Score = 42.4 bits (98), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 60/243 (24%), Positives = 100/243 (41%), Gaps = 41/243 (16%)
Query: 385 EIALLNKIN-HSNLII-LSGVCFNEGNCYLVYEYAVNGTLSDWVFSNKNEGKYLDWKQRI 442
EIA LNK+ HS+ II L + Y+V E N L+ W+ K+ +D +R
Sbjct: 57 EIAYLNKLQQHSDKIIRLYDYEITDQYIYMVMECG-NIDLNSWLKKKKS----IDPWERK 111
Query: 443 QIALDVATGLNYLHSFTNPPHVHKDINSSNVLLDSDLRAKIANFAMARPAEGQEGEFALT 502
++ ++ +H VH D+ +N L+ D K+ +F +A +
Sbjct: 112 SYWKNMLEAVHTIHQHGI---VHSDLKPANFLI-VDGMLKLIDFGIANQMQPDTTSVVKD 167
Query: 503 RHIVGTKGYMAPEYL-------ENGLVSTKL----DVYAFGVLILEMLTGKEAAALHAEE 551
VGT YM PE + ENG +K+ DV++ G ++ M GK
Sbjct: 168 SQ-VGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTP------- 219
Query: 552 NNMHLSDVLNAVLTKEDGEESLRHFIDPTLQGNYPLELALLVIRLIDACLKKDPTDRPTM 611
++N + L IDP + +P + ++ CLK+DP R ++
Sbjct: 220 ----FQQIINQI-------SKLHAIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISI 268
Query: 612 YEI 614
E+
Sbjct: 269 PEL 271
>pdb|2X9E|A Chain A, Human Mps1 In Complex With Nms-P715
Length = 317
Score = 42.4 bits (98), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 60/243 (24%), Positives = 100/243 (41%), Gaps = 41/243 (16%)
Query: 385 EIALLNKIN-HSNLII-LSGVCFNEGNCYLVYEYAVNGTLSDWVFSNKNEGKYLDWKQRI 442
EIA LNK+ HS+ II L + Y+V E N L+ W+ K+ +D +R
Sbjct: 60 EIAYLNKLQQHSDKIIRLYDYEITDQYIYMVMECG-NIDLNSWLKKKKS----IDPWERK 114
Query: 443 QIALDVATGLNYLHSFTNPPHVHKDINSSNVLLDSDLRAKIANFAMARPAEGQEGEFALT 502
++ ++ +H VH D+ +N L+ D K+ +F +A +
Sbjct: 115 SYWKNMLEAVHTIHQHGI---VHSDLKPANFLI-VDGMLKLIDFGIANQMQPDTTSVVKD 170
Query: 503 RHIVGTKGYMAPEYL-------ENGLVSTKL----DVYAFGVLILEMLTGKEAAALHAEE 551
VGT YM PE + ENG +K+ DV++ G ++ M GK
Sbjct: 171 SQ-VGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTP------- 222
Query: 552 NNMHLSDVLNAVLTKEDGEESLRHFIDPTLQGNYPLELALLVIRLIDACLKKDPTDRPTM 611
++N + L IDP + +P + ++ CLK+DP R ++
Sbjct: 223 ----FQQIINQI-------SKLHAIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISI 271
Query: 612 YEI 614
E+
Sbjct: 272 PEL 274
>pdb|3HMN|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With Atp
pdb|3HMO|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With The Inhibitor Staurosporine
pdb|3HMP|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With A Quinazolin Ligand Compound 4
Length = 342
Score = 42.4 bits (98), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 60/243 (24%), Positives = 100/243 (41%), Gaps = 41/243 (16%)
Query: 385 EIALLNKIN-HSNLII-LSGVCFNEGNCYLVYEYAVNGTLSDWVFSNKNEGKYLDWKQRI 442
EIA LNK+ HS+ II L + Y+V E N L+ W+ K+ +D +R
Sbjct: 104 EIAYLNKLQQHSDKIIRLYDYEITDQYIYMVMECG-NIDLNSWLKKKKS----IDPWERK 158
Query: 443 QIALDVATGLNYLHSFTNPPHVHKDINSSNVLLDSDLRAKIANFAMARPAEGQEGEFALT 502
++ ++ +H VH D+ +N L+ D K+ +F +A +
Sbjct: 159 SYWKNMLEAVHTIHQHGI---VHSDLKPANFLI-VDGMLKLIDFGIANQMQPDTTSVVKD 214
Query: 503 RHIVGTKGYMAPEYL-------ENGLVSTKL----DVYAFGVLILEMLTGKEAAALHAEE 551
VGT YM PE + ENG +K+ DV++ G ++ M GK
Sbjct: 215 SQ-VGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTP------- 266
Query: 552 NNMHLSDVLNAVLTKEDGEESLRHFIDPTLQGNYPLELALLVIRLIDACLKKDPTDRPTM 611
++N + L IDP + +P + ++ CLK+DP R ++
Sbjct: 267 ----FQQIINQI-------SKLHAIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISI 315
Query: 612 YEI 614
E+
Sbjct: 316 PEL 318
>pdb|3CEK|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(ttk)
pdb|3GFW|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrolo-Pyridin Ligand
Length = 313
Score = 42.4 bits (98), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 60/243 (24%), Positives = 100/243 (41%), Gaps = 41/243 (16%)
Query: 385 EIALLNKIN-HSNLII-LSGVCFNEGNCYLVYEYAVNGTLSDWVFSNKNEGKYLDWKQRI 442
EIA LNK+ HS+ II L + Y+V E N L+ W+ K+ +D +R
Sbjct: 76 EIAYLNKLQQHSDKIIRLYDYEITDQYIYMVMECG-NIDLNSWLKKKKS----IDPWERK 130
Query: 443 QIALDVATGLNYLHSFTNPPHVHKDINSSNVLLDSDLRAKIANFAMARPAEGQEGEFALT 502
++ ++ +H VH D+ +N L+ D K+ +F +A +
Sbjct: 131 SYWKNMLEAVHTIHQHGI---VHSDLKPANFLI-VDGMLKLIDFGIANQMQPDTTSVVKD 186
Query: 503 RHIVGTKGYMAPEYL-------ENGLVSTKL----DVYAFGVLILEMLTGKEAAALHAEE 551
VGT YM PE + ENG +K+ DV++ G ++ M GK
Sbjct: 187 SQ-VGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTP------- 238
Query: 552 NNMHLSDVLNAVLTKEDGEESLRHFIDPTLQGNYPLELALLVIRLIDACLKKDPTDRPTM 611
++N + L IDP + +P + ++ CLK+DP R ++
Sbjct: 239 ----FQQIINQI-------SKLHAIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISI 287
Query: 612 YEI 614
E+
Sbjct: 288 PEL 290
>pdb|3VQU|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With 4- [(4-Amino-5-Cyano-6-Ethoxypyridin-2-
Yl)amino]benzamide
Length = 320
Score = 42.4 bits (98), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 60/243 (24%), Positives = 100/243 (41%), Gaps = 41/243 (16%)
Query: 385 EIALLNKIN-HSNLII-LSGVCFNEGNCYLVYEYAVNGTLSDWVFSNKNEGKYLDWKQRI 442
EIA LNK+ HS+ II L + Y+V E N L+ W+ K+ +D +R
Sbjct: 56 EIAYLNKLQQHSDKIIRLYDYEITDQYIYMVMECG-NIDLNSWLKKKKS----IDPWERK 110
Query: 443 QIALDVATGLNYLHSFTNPPHVHKDINSSNVLLDSDLRAKIANFAMARPAEGQEGEFALT 502
++ ++ +H VH D+ +N L+ D K+ +F +A +
Sbjct: 111 SYWKNMLEAVHTIHQHGI---VHSDLKPANFLI-VDGMLKLIDFGIANQMQPDTTSVVKD 166
Query: 503 RHIVGTKGYMAPEYL-------ENGLVSTKL----DVYAFGVLILEMLTGKEAAALHAEE 551
VGT YM PE + ENG +K+ DV++ G ++ M GK
Sbjct: 167 SQ-VGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTP------- 218
Query: 552 NNMHLSDVLNAVLTKEDGEESLRHFIDPTLQGNYPLELALLVIRLIDACLKKDPTDRPTM 611
++N + L IDP + +P + ++ CLK+DP R ++
Sbjct: 219 ----FQQIINQI-------SKLHAIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISI 267
Query: 612 YEI 614
E+
Sbjct: 268 PEL 270
>pdb|2ZMC|A Chain A, Crystal Structure Of Human Mitotic Checkpoint Kinase Mps1
Catalytic Domain Apo Form
Length = 390
Score = 42.4 bits (98), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 61/243 (25%), Positives = 100/243 (41%), Gaps = 41/243 (16%)
Query: 385 EIALLNKIN-HSNLII-LSGVCFNEGNCYLVYEYAVNGTLSDWVFSNKNEGKYLDWKQRI 442
EIA LNK+ HS+ II L + Y+V E N L+ W+ K+ +D +R
Sbjct: 104 EIAYLNKLQQHSDKIIRLYDYEITDQYIYMVMECG-NIDLNSWLKKKKS----IDPWERK 158
Query: 443 QIALDVATGLNYLHSFTNPPHVHKDINSSNVLLDSDLRAKIANFAMARPAEGQEGEFALT 502
++ L +H+ VH D+ +N L+ D K+ +F +A +
Sbjct: 159 SYWKNM---LEAVHTIHQHGIVHSDLKPANFLI-VDGMLKLIDFGIANQMQPDTTSVVKD 214
Query: 503 RHIVGTKGYMAPEYL-------ENGLVSTKL----DVYAFGVLILEMLTGKEAAALHAEE 551
VGT YM PE + ENG +K+ DV++ G ++ M GK
Sbjct: 215 SQ-VGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTP------- 266
Query: 552 NNMHLSDVLNAVLTKEDGEESLRHFIDPTLQGNYPLELALLVIRLIDACLKKDPTDRPTM 611
++N + L IDP + +P + ++ CLK+DP R ++
Sbjct: 267 ----FQQIINQI-------SKLHAIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISI 315
Query: 612 YEI 614
E+
Sbjct: 316 PEL 318
>pdb|2IN6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd311839
pdb|2IO6|A Chain A, Wee1 Kinase Complexed With Inhibitor Pd330961
Length = 287
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 69/152 (45%), Gaps = 21/152 (13%)
Query: 361 GSVYR--GKINGGFAAIKK----VNGDVSKEIALLNKINHSNLIILSGV-----CFNEGN 409
GSV++ +++G AIK+ + G V ++ AL H+ L S V + E +
Sbjct: 23 GSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQHSHVVRYFSAWAEDD 82
Query: 410 CYLVY-EYAVNGTLSDWVFSNKNEGKYLDWKQRIQIALDVATGLNYLHSFTNPPHVHKDI 468
L+ EY G+L+D + N Y + + L V GL Y+HS + VH DI
Sbjct: 83 HMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIHSMSL---VHMDI 139
Query: 469 NSSNVLLDSDLRAKIANFAMARPAEGQEGEFA 500
SN+ + R I N A EG E ++A
Sbjct: 140 KPSNIFIS---RTSIPNAA---SEEGDEDDWA 165
>pdb|3BI6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd352396
pdb|3BIZ|A Chain A, Wee1 Kinase Complex With Inhibitor Pd331618
pdb|3CQE|A Chain A, Wee1 Kinase Complex With Inhibitor Pd074291
pdb|3CR0|A Chain A, Wee1 Kinase Complex With Inhibitor Pd259_809
Length = 287
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 69/152 (45%), Gaps = 21/152 (13%)
Query: 361 GSVYR--GKINGGFAAIKK----VNGDVSKEIALLNKINHSNLIILSGV-----CFNEGN 409
GSV++ +++G AIK+ + G V ++ AL H+ L S V + E +
Sbjct: 23 GSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQHSHVVRYFSAWAEDD 82
Query: 410 CYLVY-EYAVNGTLSDWVFSNKNEGKYLDWKQRIQIALDVATGLNYLHSFTNPPHVHKDI 468
L+ EY G+L+D + N Y + + L V GL Y+HS + VH DI
Sbjct: 83 HMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIHSMSL---VHMDI 139
Query: 469 NSSNVLLDSDLRAKIANFAMARPAEGQEGEFA 500
SN+ + R I N A EG E ++A
Sbjct: 140 KPSNIFIS---RTSIPNAA---SEEGDEDDWA 165
>pdb|1X8B|A Chain A, Structure Of Human Wee1a Kinase: Kinase Domain Complexed
With Inhibitor Pd0407824
Length = 289
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 69/152 (45%), Gaps = 21/152 (13%)
Query: 361 GSVYR--GKINGGFAAIKK----VNGDVSKEIALLNKINHSNLIILSGV-----CFNEGN 409
GSV++ +++G AIK+ + G V ++ AL H+ L S V + E +
Sbjct: 25 GSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQHSHVVRYFSAWAEDD 84
Query: 410 CYLVY-EYAVNGTLSDWVFSNKNEGKYLDWKQRIQIALDVATGLNYLHSFTNPPHVHKDI 468
L+ EY G+L+D + N Y + + L V GL Y+HS + VH DI
Sbjct: 85 HMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIHSMSL---VHMDI 141
Query: 469 NSSNVLLDSDLRAKIANFAMARPAEGQEGEFA 500
SN+ + R I N A EG E ++A
Sbjct: 142 KPSNIFIS---RTSIPNAA---SEEGDEDDWA 167
>pdb|2Z2W|A Chain A, Humand Wee1 Kinase Complexed With Inhibitor Pf0335770
Length = 285
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 69/152 (45%), Gaps = 21/152 (13%)
Query: 361 GSVYR--GKINGGFAAIKK----VNGDVSKEIALLNKINHSNLIILSGV-----CFNEGN 409
GSV++ +++G AIK+ + G V ++ AL H+ L S V + E +
Sbjct: 21 GSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQHSHVVRYFSAWAEDD 80
Query: 410 CYLVY-EYAVNGTLSDWVFSNKNEGKYLDWKQRIQIALDVATGLNYLHSFTNPPHVHKDI 468
L+ EY G+L+D + N Y + + L V GL Y+HS + VH DI
Sbjct: 81 HMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIHSMSL---VHMDI 137
Query: 469 NSSNVLLDSDLRAKIANFAMARPAEGQEGEFA 500
SN+ + R I N A EG E ++A
Sbjct: 138 KPSNIFIS---RTSIPNAA---SEEGDEDDWA 163
>pdb|3SDJ|A Chain A, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|B Chain B, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|C Chain C, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|D Chain D, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|E Chain E, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|F Chain F, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|G Chain G, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|H Chain H, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|I Chain I, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|J Chain J, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|K Chain K, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|L Chain L, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|M Chain M, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|N Chain N, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
Length = 448
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 65/284 (22%), Positives = 123/284 (43%), Gaps = 49/284 (17%)
Query: 363 VYRGKINGGFAAIKKVNGDVSK----EIALLNKIN-HSNLIILSGVCFNEGNCYLVYEYA 417
V++G G A+K++ D EI LL + + H N+I + Y+ E
Sbjct: 50 VFQGSFQGRPVAVKRMLIDFCDIALMEIKLLTESDDHPNVIRYYCSETTDRFLYIALELC 109
Query: 418 VNGTLSDWVFSNKNEGKYLDWKQR---IQIALDVATGLNYLHSFTNPPHVHKDINSSNVL 474
N L D V S + L ++ I + +A+G+ +LHS +H+D+ N+L
Sbjct: 110 -NLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHSLKI---IHRDLKPQNIL 165
Query: 475 LDS-------------DLRAKIANFAMARPAEGQEGEFALT-RHIVGTKGYMAPEYLENG 520
+ + +LR I++F + + + + F + GT G+ APE LE
Sbjct: 166 VSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQXXFRXNLNNPSGTSGWRAPELLEES 225
Query: 521 ---LVSTKLDVYAFGVLILEMLT-GKEA-AALHAEENNMHLSDVLNAVLTKEDGEESLRH 575
++ +D+++ G + +L+ GK ++ E+N ++ + + ++ ++
Sbjct: 226 TKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYSRESN-----IIRGIFSLDE----MKC 276
Query: 576 FIDPTLQGNYPLELALLVIRLIDACLKKDPTDRPT-MYEIEHSL 618
D +L E L+ ++ID DP RPT M + H L
Sbjct: 277 LHDRSLIA----EATDLISQMIDH----DPLKRPTAMKVLRHPL 312
>pdb|3FBV|A Chain A, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|B Chain B, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|C Chain C, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|D Chain D, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|E Chain E, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|F Chain F, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|G Chain G, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|H Chain H, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|I Chain I, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|J Chain J, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|K Chain K, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|L Chain L, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|M Chain M, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|N Chain N, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3SDM|A Chain A, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|B Chain B, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|C Chain C, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|D Chain D, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|E Chain E, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|F Chain F, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|G Chain G, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
Length = 448
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 65/284 (22%), Positives = 123/284 (43%), Gaps = 49/284 (17%)
Query: 363 VYRGKINGGFAAIKKVNGDVSK----EIALLNKIN-HSNLIILSGVCFNEGNCYLVYEYA 417
V++G G A+K++ D EI LL + + H N+I + Y+ E
Sbjct: 50 VFQGSFQGRPVAVKRMLIDFCDIALMEIKLLTESDDHPNVIRYYCSETTDRFLYIALELC 109
Query: 418 VNGTLSDWVFSNKNEGKYLDWKQR---IQIALDVATGLNYLHSFTNPPHVHKDINSSNVL 474
N L D V S + L ++ I + +A+G+ +LHS +H+D+ N+L
Sbjct: 110 -NLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHSLKI---IHRDLKPQNIL 165
Query: 475 LDS-------------DLRAKIANFAMARPAEGQEGEFALT-RHIVGTKGYMAPEYLENG 520
+ + +LR I++F + + + + F + GT G+ APE LE
Sbjct: 166 VSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQXXFRXNLNNPSGTSGWRAPELLEES 225
Query: 521 ---LVSTKLDVYAFGVLILEMLT-GKEA-AALHAEENNMHLSDVLNAVLTKEDGEESLRH 575
++ +D+++ G + +L+ GK ++ E+N ++ + + ++ ++
Sbjct: 226 TKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYSRESN-----IIRGIFSLDE----MKC 276
Query: 576 FIDPTLQGNYPLELALLVIRLIDACLKKDPTDRPT-MYEIEHSL 618
D +L E L+ ++ID DP RPT M + H L
Sbjct: 277 LHDRSLIA----EATDLISQMID----HDPLKRPTAMKVLRHPL 312
>pdb|4EUT|A Chain A, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
pdb|4EUT|B Chain B, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
Length = 396
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 85/205 (41%), Gaps = 32/205 (15%)
Query: 361 GSVYRG--KINGGFAAIKKVNG-------DVS-KEIALLNKINHSNLIILSGVCFNEGNC 410
+V+RG K G AIK N DV +E +L K+NH N++ L +
Sbjct: 23 ANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTR 82
Query: 411 Y--LVYEYAVNGTLSDWVFSNKNEGKYLDWKQRIQIALDVATGLNYLHSFTNPPHVHKDI 468
+ L+ E+ G+L V + L + + + DV G+N+L VH++I
Sbjct: 83 HKVLIMEFCPCGSLYT-VLEEPSNAYGLPESEFLIVLRDVVGGMNHLRENGI---VHRNI 138
Query: 469 NSSNVLL----DSDLRAKIANFAMARPAEGQEGEFALTRHIVGTKGYMAPEYLENGLVST 524
N++ D K+ +F AR E E +L GT+ Y+ P+ E ++
Sbjct: 139 KPGNIMRVIGEDGQSVYKLTDFGAARELEDDEQFVSL----YGTEEYLHPDMYERAVLRK 194
Query: 525 K--------LDVYAFGVLILEMLTG 541
+D+++ GV TG
Sbjct: 195 DHQKKYGATVDLWSIGVTFYHAATG 219
>pdb|2RIO|A Chain A, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
pdb|2RIO|B Chain B, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
Length = 434
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 67/288 (23%), Positives = 125/288 (43%), Gaps = 53/288 (18%)
Query: 363 VYRGKINGGFAAIKKVNGDVSK----EIALLNKIN-HSNLIILSGVCFNEGNCYLVYEYA 417
V++G G A+K++ D EI LL + + H N+I + Y+ E
Sbjct: 32 VFQGSFQGRPVAVKRMLIDFCDIALMEIKLLTESDDHPNVIRYYCSETTDRFLYIALELC 91
Query: 418 VNGTLSDWVFSNKNEGKYLDWKQR---IQIALDVATGLNYLHSFTNPPHVHKDINSSNVL 474
N L D V S + L ++ I + +A+G+ +LHS +H+D+ N+L
Sbjct: 92 -NLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHSLKI---IHRDLKPQNIL 147
Query: 475 LDS-------------DLRAKIANFAMARPAEGQEGEFALT-RHIVGTKGYMAPEYLE-- 518
+ + +LR I++F + + + + F + GT G+ APE LE
Sbjct: 148 VSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQSSFRTNLNNPSGTSGWRAPELLEES 207
Query: 519 NGLVSTK-----LDVYAFGVLILEMLT-GKEA-AALHAEENNMHLSDVLNAVLTKEDGEE 571
N L + + +D+++ G + +L+ GK ++ E+N ++ + + ++
Sbjct: 208 NNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYSRESN-----IIRGIFSLDE--- 259
Query: 572 SLRHFIDPTLQGNYPLELALLVIRLIDACLKKDPTDRPT-MYEIEHSL 618
++ D +L E L+ ++ID DP RPT M + H L
Sbjct: 260 -MKCLHDRSLIA----EATDLISQMID----HDPLKRPTAMKVLRHPL 298
>pdb|3LJ0|A Chain A, Ire1 Complexed With Adp And Quercetin
pdb|3LJ0|B Chain B, Ire1 Complexed With Adp And Quercetin
pdb|3LJ1|A Chain A, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ1|B Chain B, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ2|A Chain A, Ire1 Complexed With Jak Inhibitor I
pdb|3LJ2|B Chain B, Ire1 Complexed With Jak Inhibitor I
Length = 434
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 49/207 (23%), Positives = 91/207 (43%), Gaps = 33/207 (15%)
Query: 363 VYRGKINGGFAAIKKVNGDVSK----EIALLNKIN-HSNLIILSGVCFNEGNCYLVYEYA 417
V++G G A+K++ D EI LL + + H N+I + Y+ E
Sbjct: 32 VFQGSFQGRPVAVKRMLIDFCDIALMEIKLLTESDDHPNVIRYYCSETTDRFLYIALELC 91
Query: 418 VNGTLSDWVFSNKNEGKYLDWKQR---IQIALDVATGLNYLHSFTNPPHVHKDINSSNVL 474
N L D V S + L ++ I + +A+G+ +LHS +H+D+ N+L
Sbjct: 92 -NLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHSLKI---IHRDLKPQNIL 147
Query: 475 LDS-------------DLRAKIANFAMARPAEGQEGEFALT-RHIVGTKGYMAPEYLE-- 518
+ + +LR I++F + + + + F + GT G+ APE LE
Sbjct: 148 VSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQXXFRXNLNNPSGTSGWRAPELLEES 207
Query: 519 NGLVSTK-----LDVYAFGVLILEMLT 540
N L + + +D+++ G + +L+
Sbjct: 208 NNLQTKRRLTRSIDIFSMGCVFYYILS 234
>pdb|4EUU|A Chain A, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
pdb|4EUU|B Chain B, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
Length = 319
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 86/204 (42%), Gaps = 32/204 (15%)
Query: 362 SVYRG--KINGGFAAIKKVNG-------DVS-KEIALLNKINHSNLIILSGVCFNEGNCY 411
+V+RG K G AIK N DV +E +L K+NH N++ L + +
Sbjct: 24 NVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRH 83
Query: 412 --LVYEYAVNGTLSDWVFSNKNEGKYLDWKQRIQIALDVATGLNYLHSFTNPPHVHKDIN 469
L+ E+ G+L V + L + + + DV G+N+L VH++I
Sbjct: 84 KVLIMEFCPCGSLYT-VLEEPSNAYGLPESEFLIVLRDVVGGMNHLRENGI---VHRNIK 139
Query: 470 SSNVLL----DSDLRAKIANFAMARPAEGQEGEFALTRHIVGTKGYMAPEYLENGLVSTK 525
N++ D K+ +F AR E E +F + GT+ Y+ P+ E ++
Sbjct: 140 PGNIMRVIGEDGQSVYKLTDFGAARELEDDE-QFVX---LYGTEEYLHPDMYERAVLRKD 195
Query: 526 --------LDVYAFGVLILEMLTG 541
+D+++ GV TG
Sbjct: 196 HQKKYGATVDLWSIGVTFYHAATG 219
>pdb|3P1A|A Chain A, Structure Of Human Membrane-Associated Tyrosine- And
Threonine- Specific Cdc2-Inhibitory Kinase Myt1 (Pkmyt1)
Length = 311
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 32/98 (32%), Positives = 45/98 (45%), Gaps = 20/98 (20%)
Query: 447 DVATGLNYLHSFTNPPHVHKDINSSNVLLDSDLRAKIANFAM------ARPAEGQEGEFA 500
D L +LHS VH D+ +N+ L R K+ +F + A E QEG+
Sbjct: 165 DTLLALAHLHSQGL---VHLDVKPANIFLGPRGRCKLGDFGLLVELGTAGAGEVQEGD-- 219
Query: 501 LTRHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLILEM 538
YMAPE L+ G T DV++ G+ ILE+
Sbjct: 220 --------PRYMAPELLQ-GSYGTAADVFSLGLTILEV 248
>pdb|2ZMD|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain T686a
Mutant In Complex With Sp600125 Inhibitor
Length = 390
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 60/243 (24%), Positives = 99/243 (40%), Gaps = 41/243 (16%)
Query: 385 EIALLNKIN-HSNLII-LSGVCFNEGNCYLVYEYAVNGTLSDWVFSNKNEGKYLDWKQRI 442
EIA LNK+ HS+ II L + Y+V E N L+ W+ K+ +D +R
Sbjct: 104 EIAYLNKLQQHSDKIIRLYDYEITDQYIYMVMECG-NIDLNSWLKKKKS----IDPWERK 158
Query: 443 QIALDVATGLNYLHSFTNPPHVHKDINSSNVLLDSDLRAKIANFAMARPAEGQEGEFALT 502
++ L +H+ VH D+ +N L+ D K+ +F +A +
Sbjct: 159 SYWKNM---LEAVHTIHQHGIVHSDLKPANFLI-VDGMLKLIDFGIANQMQPDTTSVVKD 214
Query: 503 RHIVGTKGYMAPEYL-------ENGLVSTKL----DVYAFGVLILEMLTGKEAAALHAEE 551
VG YM PE + ENG +K+ DV++ G ++ M GK
Sbjct: 215 SQ-VGAVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTP------- 266
Query: 552 NNMHLSDVLNAVLTKEDGEESLRHFIDPTLQGNYPLELALLVIRLIDACLKKDPTDRPTM 611
++N + L IDP + +P + ++ CLK+DP R ++
Sbjct: 267 ----FQQIINQI-------SKLHAIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISI 315
Query: 612 YEI 614
E+
Sbjct: 316 PEL 318
>pdb|2H34|A Chain A, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
pdb|2H34|B Chain B, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
Length = 309
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 22/77 (28%), Positives = 39/77 (50%), Gaps = 2/77 (2%)
Query: 465 HKDINSSNVLLDSDLRAKIANFAMARPAEGQEGEFALTRHIVGTKGYMAPEYLENGLVST 524
H+D+ N+L+ +D A + +F +A + + + + VGT Y APE +
Sbjct: 157 HRDVKPENILVSADDFAYLVDFGIA--SATTDEKLTQLGNTVGTLYYXAPERFSESHATY 214
Query: 525 KLDVYAFGVLILEMLTG 541
+ D+YA ++ E LTG
Sbjct: 215 RADIYALTCVLYECLTG 231
>pdb|3N9X|A Chain A, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
pdb|3N9X|B Chain B, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
Length = 432
Score = 37.7 bits (86), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 47/207 (22%), Positives = 84/207 (40%), Gaps = 54/207 (26%)
Query: 373 AAIKKVN---------GDVSKEIALLNKINHSNLIILSGVCFNEG-----NCYLVYEYA- 417
AIKKVN + +EI +LN++ +I L + + Y+V E A
Sbjct: 54 VAIKKVNRMFEDLIDCKRILREITILNRLKSDYIIRLYDLIIPDDLLKFDELYIVLEIAD 113
Query: 418 --VNGTLSDWVFSNKNEGKYLDWKQRIQIALDVATGLNYLHSFTNPPHVHKDINSSNVLL 475
+ +F + K I ++ G N++H +H+D+ +N LL
Sbjct: 114 SDLKKLFKTPIFLTEEHIK--------TILYNLLLGENFIHESG---IIHRDLKPANCLL 162
Query: 476 DSDLRAKIANFAMARPAEGQEG--------------------EFALTRHIVGTKGYMAPE 515
+ D K+ +F +AR ++ + LT H+V T+ Y APE
Sbjct: 163 NQDCSVKVCDFGLARTINSEKDTNIVNDLEENEEPGPHNKNLKKQLTSHVV-TRWYRAPE 221
Query: 516 YL---ENGLVSTKLDVYAFGVLILEML 539
+ EN + +D+++ G + E+L
Sbjct: 222 LILLQEN--YTKSIDIWSTGCIFAELL 246
>pdb|3NIE|A Chain A, Crystal Structure Of Pf11_0147
pdb|3NIE|B Chain B, Crystal Structure Of Pf11_0147
Length = 429
Score = 36.6 bits (83), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 48/210 (22%), Positives = 82/210 (39%), Gaps = 57/210 (27%)
Query: 373 AAIKKVN---------GDVSKEIALLNKINHSNLIILSGVCFNEG-----NCYLVYEYA- 417
AIKKVN + +EI +LN++ +I L + E Y+V E A
Sbjct: 56 VAIKKVNRMFEDLIDCKRILREITILNRLKSDYIIRLHDLIIPEDLLKFDELYIVLEIAD 115
Query: 418 --VNGTLSDWVFSNKNEGKYLDWKQRIQIALDVATGLNYLHSFTNPPHVHKDINSSNVLL 475
+ +F + K I ++ G ++H +H+D+ +N LL
Sbjct: 116 SDLKKLFKTPIFLTEQHVK--------TILYNLLLGEKFIHE---SGIIHRDLKPANCLL 164
Query: 476 DSDLRAKIANFAMARPAEGQEG-----------------------EFALTRHIVGTKGYM 512
+ D KI +F +AR + + LT H+V T+ Y
Sbjct: 165 NQDCSVKICDFGLARTINSDKDIHIVNDLEEKEENEEPGPHNKNLKKQLTSHVV-TRWYR 223
Query: 513 APEYL---ENGLVSTKLDVYAFGVLILEML 539
APE + EN + +D+++ G + E+L
Sbjct: 224 APELILLQEN--YTNSIDIWSTGCIFAELL 251
>pdb|3E3P|A Chain A, Glycogen Synthase Kinase From Leishmania Major
pdb|3E3P|B Chain B, Glycogen Synthase Kinase From Leishmania Major
Length = 360
Score = 35.8 bits (81), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 42/80 (52%), Gaps = 6/80 (7%)
Query: 465 HKDINSSNVLL-DSDLRAKIANFAMARPAEGQEGEFALTRHIVGTKGYMAPEYL-ENGLV 522
H+DI NVL+ ++D K+ +F A+ E A + ++ Y APE + N
Sbjct: 154 HRDIKPHNVLVNEADGTLKLCDFGSAKKLSPSEPNVAY----ICSRYYRAPELIFGNQHY 209
Query: 523 STKLDVYAFGVLILEMLTGK 542
+T +D+++ G + EM+ G+
Sbjct: 210 TTAVDIWSVGCIFAEMMLGE 229
>pdb|3JUH|A Chain A, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
pdb|3JUH|B Chain B, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
Length = 335
Score = 35.4 bits (80), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 33/135 (24%), Positives = 61/135 (45%), Gaps = 17/135 (12%)
Query: 447 DVATGLNYLHSFTNPPHVHKDINSSNVLLDSDLRA-KIANFAMARPAE-GQEGEFALTRH 504
++ L+Y HS +H+D+ NVL+D + R ++ ++ +A GQE
Sbjct: 139 EILKALDYCHSMGI---MHRDVKPHNVLIDHEHRKLRLIDWGLAEFYHPGQEYNVR---- 191
Query: 505 IVGTKGYMAPEYL-ENGLVSTKLDVYAFGVLILEMLTGKEAAALHAEENNMHLSDVLNAV 563
V ++ + PE L + + LD+++ G ++ M+ KE H +N L + +
Sbjct: 192 -VASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKE-PFFHGHDNYDQLVRIAKVL 249
Query: 564 LTKEDGEESLRHFID 578
G E L +ID
Sbjct: 250 -----GTEDLYDYID 259
>pdb|3FHR|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase-Activated Protein Kinase 3
(Mk3)-Inhibitor Complex
pdb|3FXW|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase- Activated Protein Kinase 3INHIBITOR 2
COMPLEX
Length = 336
Score = 35.4 bits (80), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 28/106 (26%), Positives = 49/106 (46%), Gaps = 11/106 (10%)
Query: 439 KQRIQIALDVATGLNYLHSFTNPPHVHKDINSSNVLLDS---DLRAKIANFAMARPAEGQ 495
++ +I D+ T + +LHS H+D+ N+L S D K+ +F A+ +
Sbjct: 128 REAAEIMRDIGTAIQFLHSHNI---AHRDVKPENLLYTSKEKDAVLKLTDFGFAK----E 180
Query: 496 EGEFALTRHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLILEMLTG 541
+ AL T Y+APE L D+++ GV++ +L G
Sbjct: 181 TTQNALQTPCY-TPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCG 225
>pdb|3R1N|A Chain A, Mk3 Kinase Bound To Compound 5b
pdb|3SHE|A Chain A, Novel Atp-Competitive Mk2 Inhibitors With Potent
Biochemical And Cell- Based Activity Throughout The
Series
Length = 317
Score = 35.4 bits (80), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 28/106 (26%), Positives = 49/106 (46%), Gaps = 11/106 (10%)
Query: 439 KQRIQIALDVATGLNYLHSFTNPPHVHKDINSSNVLLDS---DLRAKIANFAMARPAEGQ 495
++ +I D+ T + +LHS H+D+ N+L S D K+ +F A+ +
Sbjct: 109 REAAEIMRDIGTAIQFLHSHNI---AHRDVKPENLLYTSKEKDAVLKLTDFGFAK----E 161
Query: 496 EGEFALTRHIVGTKGYMAPEYLENGLVSTKLDVYAFGVLILEMLTG 541
+ AL T Y+APE L D+++ GV++ +L G
Sbjct: 162 TTQNALQTPCY-TPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCG 206
>pdb|2PZI|A Chain A, Crystal Structure Of Protein Kinase Pkng From
Mycobacterium Tuberculosis In Complex With
Tetrahydrobenzothiophene Ax20017
pdb|2PZI|B Chain B, Crystal Structure Of Protein Kinase Pkng From
Mycobacterium Tuberculosis In Complex With
Tetrahydrobenzothiophene Ax20017
Length = 681
Score = 35.4 bits (80), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 32/122 (26%), Positives = 55/122 (45%), Gaps = 18/122 (14%)
Query: 411 YLVYEYAVNGTLSDWVFSNKNEGKYLDWKQRIQIALDVATGLNYLHSFTNPPHVHKDINS 470
Y+V EY +L +++G+ L + I L++ L+YLHS V+ D+
Sbjct: 160 YIVMEYVGGQSL------KRSKGQKLPVAEAIAYLLEILPALSYLHSIG---LVYNDLKP 210
Query: 471 SNVLLDSDLRAKIANFAMARPAEGQEGEFALTRHIVGTKGYMAPEYLENGLVSTKLDVYA 530
N++L + I A++R F ++ GT G+ APE + G + D+Y
Sbjct: 211 ENIMLTEEQLKLIDLGAVSR-----INSFG---YLYGTPGFQAPEIVRTG-PTVATDIYT 261
Query: 531 FG 532
G
Sbjct: 262 VG 263
>pdb|3U87|A Chain A, Structure Of A Chimeric Construct Of Human Ck2alpha And
Human Ck2alpha' In Complex With A Non-hydrolysable
Atp-analogue
pdb|3U87|B Chain B, Structure Of A Chimeric Construct Of Human Ck2alpha And
Human Ck2alpha' In Complex With A Non-hydrolysable
Atp-analogue
Length = 349
Score = 35.4 bits (80), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 32/135 (23%), Positives = 61/135 (45%), Gaps = 17/135 (12%)
Query: 447 DVATGLNYLHSFTNPPHVHKDINSSNVLLDSDLRA-KIANFAMARPAE-GQEGEFALTRH 504
++ L+Y HS +H+D+ NV++D + R ++ ++ +A GQE
Sbjct: 139 EILKALDYCHSMGI---MHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVR---- 191
Query: 505 IVGTKGYMAPEYL-ENGLVSTKLDVYAFGVLILEMLTGKEAAALHAEENNMHLSDVLNAV 563
V ++ + PE L + + LD+++ G ++ M+ KE H +N L + +
Sbjct: 192 -VASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKE-PFFHGHDNYDQLVRIAKVL 249
Query: 564 LTKEDGEESLRHFID 578
G E L +ID
Sbjct: 250 -----GTEDLYDYID 259
>pdb|1NA7|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2
Length = 329
Score = 35.0 bits (79), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 32/135 (23%), Positives = 61/135 (45%), Gaps = 17/135 (12%)
Query: 447 DVATGLNYLHSFTNPPHVHKDINSSNVLLDSDLRA-KIANFAMARPAE-GQEGEFALTRH 504
++ L+Y HS +H+D+ NV++D + R ++ ++ +A GQE
Sbjct: 139 EILKALDYCHSMGI---MHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVR---- 191
Query: 505 IVGTKGYMAPEYL-ENGLVSTKLDVYAFGVLILEMLTGKEAAALHAEENNMHLSDVLNAV 563
V ++ + PE L + + LD+++ G ++ M+ KE H +N L + +
Sbjct: 192 -VASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKE-PFFHGHDNYDQLVRIAKVL 249
Query: 564 LTKEDGEESLRHFID 578
G E L +ID
Sbjct: 250 -----GTEDLYDYID 259
>pdb|3LLT|A Chain A, Crystal Structure Of Pf14_0431, Kinase Domain
Length = 360
Score = 35.0 bits (79), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 30/132 (22%), Positives = 55/132 (41%), Gaps = 26/132 (19%)
Query: 446 LDVATGLNYLHSFTNPPHVHKDINSSNVLLDSDLRAKIANFAMARPAEGQEGEFALTRH- 504
+++ LNYL + H D+ N+LLD K + + R +G++ + T+
Sbjct: 144 IEILKALNYLRKMSL---THTDLKPENILLDDPYFEK-SLITVRRVTDGKKIQIYRTKST 199
Query: 505 -------------------IVGTKGYMAPEYLENGLVSTKLDVYAFGVLILEMLTGKEAA 545
I+ T+ Y APE + N D+++FG ++ E+ TG +
Sbjct: 200 GIKLIDFGCATFKSDYHGSIINTRQYRAPEVILNLGWDVSSDMWSFGCVLAELYTG--SL 257
Query: 546 ALHAEENNMHLS 557
E+ HL+
Sbjct: 258 LFRTHEHMEHLA 269
>pdb|3MB6|A Chain A, Human Ck2 Catalytic Domain In Complex With A Difurane
Derivative Inhibitor (Cpa)
pdb|3MB7|A Chain A, Human Ck2 Catalytic Domain In Complex With A Difurane
Derivative Inhibitor (Amr)
pdb|3OWJ|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Pyridocarbazole Derivative Inhibitor
pdb|3OWK|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Benzopyridoindole Derivative Inhibitor
pdb|3OWL|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Benzopyridoindole Derivative Inhibitor
Length = 331
Score = 35.0 bits (79), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 32/135 (23%), Positives = 61/135 (45%), Gaps = 17/135 (12%)
Query: 447 DVATGLNYLHSFTNPPHVHKDINSSNVLLDSDLRA-KIANFAMARPAE-GQEGEFALTRH 504
++ L+Y HS +H+D+ NV++D + R ++ ++ +A GQE
Sbjct: 139 EILKALDYCHSMGI---MHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVR---- 191
Query: 505 IVGTKGYMAPEYL-ENGLVSTKLDVYAFGVLILEMLTGKEAAALHAEENNMHLSDVLNAV 563
V ++ + PE L + + LD+++ G ++ M+ KE H +N L + +
Sbjct: 192 -VASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKE-PFFHGHDNYDQLVRIAKVL 249
Query: 564 LTKEDGEESLRHFID 578
G E L +ID
Sbjct: 250 -----GTEDLYDYID 259
>pdb|3NSZ|A Chain A, Human Ck2 Catalytic Domain In Complex With Amppn
Length = 330
Score = 35.0 bits (79), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 32/135 (23%), Positives = 61/135 (45%), Gaps = 17/135 (12%)
Query: 447 DVATGLNYLHSFTNPPHVHKDINSSNVLLDSDLRA-KIANFAMARPAE-GQEGEFALTRH 504
++ L+Y HS +H+D+ NV++D + R ++ ++ +A GQE
Sbjct: 138 EILKALDYCHSMGI---MHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVR---- 190
Query: 505 IVGTKGYMAPEYL-ENGLVSTKLDVYAFGVLILEMLTGKEAAALHAEENNMHLSDVLNAV 563
V ++ + PE L + + LD+++ G ++ M+ KE H +N L + +
Sbjct: 191 -VASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKE-PFFHGHDNYDQLVRIAKVL 248
Query: 564 LTKEDGEESLRHFID 578
G E L +ID
Sbjct: 249 -----GTEDLYDYID 258
>pdb|3NGA|A Chain A, Human Ck2 Catalytic Domain In Complex With Cx-4945
pdb|3NGA|B Chain B, Human Ck2 Catalytic Domain In Complex With Cx-4945
pdb|3U4U|A Chain A, Casein Kinase 2 In Complex With Az-Inhibitor
Length = 333
Score = 35.0 bits (79), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 32/135 (23%), Positives = 61/135 (45%), Gaps = 17/135 (12%)
Query: 447 DVATGLNYLHSFTNPPHVHKDINSSNVLLDSDLRA-KIANFAMARPAE-GQEGEFALTRH 504
++ L+Y HS +H+D+ NV++D + R ++ ++ +A GQE
Sbjct: 139 EILKALDYCHSMGI---MHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVR---- 191
Query: 505 IVGTKGYMAPEYL-ENGLVSTKLDVYAFGVLILEMLTGKEAAALHAEENNMHLSDVLNAV 563
V ++ + PE L + + LD+++ G ++ M+ KE H +N L + +
Sbjct: 192 -VASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKE-PFFHGHDNYDQLVRIAKVL 249
Query: 564 LTKEDGEESLRHFID 578
G E L +ID
Sbjct: 250 -----GTEDLYDYID 259
>pdb|3H30|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2 With 5,6-Dichloro-1-Beta-D-
Ribofuranosylbenzimidazole
pdb|3H30|B Chain B, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2 With 5,6-Dichloro-1-Beta-D-
Ribofuranosylbenzimidazole
Length = 334
Score = 35.0 bits (79), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 32/135 (23%), Positives = 61/135 (45%), Gaps = 17/135 (12%)
Query: 447 DVATGLNYLHSFTNPPHVHKDINSSNVLLDSDLRA-KIANFAMARPAE-GQEGEFALTRH 504
++ L+Y HS +H+D+ NV++D + R ++ ++ +A GQE
Sbjct: 139 EILKALDYCHSMGI---MHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVR---- 191
Query: 505 IVGTKGYMAPEYL-ENGLVSTKLDVYAFGVLILEMLTGKEAAALHAEENNMHLSDVLNAV 563
V ++ + PE L + + LD+++ G ++ M+ KE H +N L + +
Sbjct: 192 -VASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKE-PFFHGHDNYDQLVRIAKVL 249
Query: 564 LTKEDGEESLRHFID 578
G E L +ID
Sbjct: 250 -----GTEDLYDYID 259
>pdb|1JWH|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Holoenzyme
pdb|1JWH|B Chain B, Crystal Structure Of Human Protein Kinase Ck2 Holoenzyme
pdb|3PE1|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Alpha
Subunit In Complex With The Inhibitor Cx-4945
pdb|3PE2|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 In Complex
With The Inhibitor Cx-5011
pdb|3R0T|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Alpha
Subunit In Complex With The Inhibitor Cx-5279
Length = 337
Score = 35.0 bits (79), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 32/135 (23%), Positives = 61/135 (45%), Gaps = 17/135 (12%)
Query: 447 DVATGLNYLHSFTNPPHVHKDINSSNVLLDSDLRA-KIANFAMARPAE-GQEGEFALTRH 504
++ L+Y HS +H+D+ NV++D + R ++ ++ +A GQE
Sbjct: 139 EILKALDYCHSMGI---MHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVR---- 191
Query: 505 IVGTKGYMAPEYL-ENGLVSTKLDVYAFGVLILEMLTGKEAAALHAEENNMHLSDVLNAV 563
V ++ + PE L + + LD+++ G ++ M+ KE H +N L + +
Sbjct: 192 -VASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKE-PFFHGHDNYDQLVRIAKVL 249
Query: 564 LTKEDGEESLRHFID 578
G E L +ID
Sbjct: 250 -----GTEDLYDYID 259
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.318 0.135 0.394
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 17,620,812
Number of Sequences: 62578
Number of extensions: 726641
Number of successful extensions: 4158
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 762
Number of HSP's successfully gapped in prelim test: 280
Number of HSP's that attempted gapping in prelim test: 1966
Number of HSP's gapped (non-prelim): 1141
length of query: 628
length of database: 14,973,337
effective HSP length: 105
effective length of query: 523
effective length of database: 8,402,647
effective search space: 4394584381
effective search space used: 4394584381
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 54 (25.4 bits)