Citrus Sinensis ID: 039630

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170----
Protein Sequence
MHGHSQYSIINYSRKVQGYKFSKISYNELKIATNGFRTSNKIGEGGFGSVYKGRLEDGTVVAVNVLSVESKQGETEFMSEVASMANINICHENLVKLHGGCIDGPSRILAPLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEIKTTY
Secondary Structure (PSIPRED)
cccccccccccccccccccccccEEHHHHHHHHcccccccccccccccccEEEEcccccEEEEEEccccccccHHHHHHHHHHHHHHHHcccccccEEccccccccccccccccccccEEEEcccccHHHHHHcccccccccccccccHHHHHHHHHHHHHHHHHHHccccccc
Secondary Structure Prediction (SSPRO)
cccccccccccccccccccccccEcHHHHHHHHccccHHccccccccccEEEEEcccccEEEEEEEcccccccHHHHHHHHHHHHHHHcccHHHHHEEEEEccccccccccccccEEEEEEEcccccHHHHHccccccccccccccccHHHHHHHHHHHHHHHHHHHHcccccc
Coil and Loop (DISEMBL)
MHGHSQYSIINYSRKVQGYKFSKISYNElkiatngfrtsnkigeggfgsvykgrledgTVVAVNVLSVESKQGETEFMSEVASMANINICHENLVklhggcidgpsriLAPLQASIEALFLFTKLWKMDKFISIYVVSgskknrvkFNWIARREIALGIARGLAYIHEEIKTTY
Flexible Loop (DISEMBL)
mhghsqysiinysrkvQGYKFSKISYNELKIatngfrtsnkigeGGFGSVYKGRLEDGTVVAVNVLSVESKQGETEFMSEVASMANINICHENLVKLHGGCIDGPSRILAPLQASIEALFLFTKLWKMDKFISIYvvsgskknrvkfNWIARREIALGIARGLAYIHEEIKTTY
Low Complexity Region (SEG)
MHGHSQYSIINYSRKVQGYKFSKISYNELKIATNGFRTSNKIGEGGFGSVYKGRLEDGTVVAVNVLSVESKQGETEFMSEVASMANINICHENLVKLHGGCIDGPSRILAPLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEIKTTY
Disordered region (IsUnstruct)
******YSIINYSRKVQGYKFSKISYNELKIATNGFRTSNKIGEGGFGSVYKGRLEDGTVVAVNVLSVESKQGETEFMSEVASMANINICHENLVKLHGGCIDGPSRILAPLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEE*****
Disordered Region (DISOPRED)
*********************SKISYNELKIATNGFRTSNKIGEGGFGSVYKGRLEDGTVVAVNVLSVE***GETEFMSEVASMANINICHENLVKLHGGCIDGPSRILAPLQASIEALFLFTKLWKMDKFISIYVVS****NRVKFNWIARREIALGIARGLAYIHEEIKT**
Disordered Region (DISEMBL)
MHGHSQYSIINYSRKVQGYKFSKISYNELKIATNGFRTSNKIGEGGFGSVYKGRLEDGTVVAVNVLSVESKQGETEFMSEVASMANINICHENLVKLHGGCIDGPSRILAPLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEIKTTY
Disordered Region (DISPRO)
*****************GYKFSKISYNELKIATNGFRTSNKIGEGGFGSVYKGRLEDGTVVAVNVLSVESKQGETEFMSEVASMANINICHENLVKLHGGCIDGPSRILAPLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEIKTT*
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhiiiiiii
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MHGHSQYSIINYSRKVQGYKFSKISYNELKIATNGFRTSNKIGEGGFGSVYKGRLEDGTVVAVNVLSVESKQGETEFMSEVASMANINICHENLVKLHGGCIDGPSRILAPLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEIKTTY
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	174	2.2.26 [Sep-21-2011]
P85193	242	Putative serine/threonine	N/A	no	0.787	0.566	0.458	5e-31
C0LGG7	953	Probable LRR receptor-lik	no	no	0.758	0.138	0.418	2e-26
C0LGN2	1020	Probable leucine-rich rep	no	no	0.764	0.130	0.411	2e-26
C0LGH2	1032	Probable LRR receptor-lik	no	no	0.747	0.125	0.433	6e-26
C0LGH3	1033	Probable LRR receptor-lik	no	no	0.770	0.129	0.423	1e-25
Q9ASQ6	1019	Probable LRR receptor-lik	no	no	0.798	0.136	0.382	5e-25
C0LGG8	1038	Probable LRR receptor-lik	no	no	0.729	0.122	0.428	7e-25
C0LGG9	1035	Probable LRR receptor-lik	no	no	0.729	0.122	0.421	1e-24
O64780	814	G-type lectin S-receptor-	no	no	0.793	0.169	0.375	4e-23
O64770	804	G-type lectin S-receptor-	no	no	0.793	0.171	0.388	4e-23

>sp|P85193|PK01_HELAN Putative serine/threonine-protein kinase (Fragment) OS=Helianthus annuus PE=1 SV=1

 Score =  133 bits (335), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 71/155 (45%), Positives = 98/155 (63%), Gaps = 18/155 (11%)

Query: 18  GYKFSKISYNELKIATNGFRTSNKIGEGGFGSVYKGRLEDGTVVAVNVLSV--ESKQGET 75
           G KF   SY+ELK+A +GF + NK+GEGG G+VYKGRL DGT+VA+ VLSV  ES +GE 
Sbjct: 31  GKKFRLFSYHELKVACDGFSSKNKVGEGGCGAVYKGRLTDGTMVAIKVLSVELESMRGER 90

Query: 76  EFMSEVASMANINICHENLVKLHGGCIDGPSRILAPLQASIEALFLFTKLWKMDKFISIY 135
           EF+SE+A++++    HENLV LHG C++  +R L        +L               Y
Sbjct: 91  EFISEIAALSDAQ--HENLVNLHGCCVEEATRCLVYDYMENNSL--------------AY 134

Query: 136 VVSGSKKNRVKFNWIARREIALGIARGLAYIHEEI 170
              G ++NR  F+W  R+ + LG+A+ LAY+HEEI
Sbjct: 135 QFLGREQNRNSFDWTKRKNVLLGVAKALAYLHEEI 169

Helianthus annuus (taxid: 4232)
EC: 2EC: .EC: 7EC: .EC: 1EC: 1EC: .EC: 1

>sp|C0LGG7|Y1534_ARATH Probable LRR receptor-like serine/threonine-protein kinase At1g53420 OS=Arabidopsis thaliana GN=At1g53420 PE=2 SV=2

 Score =  118 bits (296), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 62/148 (41%), Positives = 95/148 (64%), Gaps = 16/148 (10%)

Query: 22  SKISYNELKIATNGFRTSNKIGEGGFGSVYKGRLEDGTVVAVNVLSVESKQGETEFMSEV 81
           +  S  ++KIATN F ++N+IGEGGFG VYKG+L DGT++AV  LS  SKQG  EF++E+
Sbjct: 610 ASFSLRQIKIATNNFDSANRIGEGGFGPVYKGKLFDGTIIAVKQLSTGSKQGNREFLNEI 669

Query: 82  ASMANINICHENLVKLHGGCIDGPSRILAPLQASIEALFLFTKLWKMDKFISIYVVSGSK 141
             ++ ++  H NLVKL+G C++G   +L  +   +E   L   L+            G +
Sbjct: 670 GMISALH--HPNLVKLYGCCVEGGQLLL--VYEFVENNSLARALF------------GPQ 713

Query: 142 KNRVKFNWIARREIALGIARGLAYIHEE 169
           + +++ +W  RR+I +G+ARGLAY+HEE
Sbjct: 714 ETQLRLDWPTRRKICIGVARGLAYLHEE 741

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|C0LGN2|Y3148_ARATH Probable leucine-rich repeat receptor-like serine/threonine-protein kinase At3g14840 OS=Arabidopsis thaliana GN=LRR-RLK PE=1 SV=1

 Score =  118 bits (295), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 63/153 (41%), Positives = 95/153 (62%), Gaps = 20/153 (13%)

Query: 19  YKFSKISYNELKIATNGFRTSNKIGEGGFGSVYKGRLEDGTVVAVNVLSVESKQGETEFM 78
           ++ S  S  ++K+AT+ F  +NKIGEGGFG V+KG + DGTV+AV  LS +SKQG  EF+
Sbjct: 655 FQISSFSLRQIKVATDNFDPANKIGEGGFGPVHKGIMTDGTVIAVKQLSAKSKQGNREFL 714

Query: 79  SEVASMANINICHENLVKLHGGCIDGPSRILA--PLQASIEALFLFTKLWKMDKFISIYV 136
           +E+A ++ +   H +LVKL+G C++G   +L    L+ +  A  LF              
Sbjct: 715 NEIAMISALQ--HPHLVKLYGCCVEGDQLLLVYEYLENNSLARALF-------------- 758

Query: 137 VSGSKKNRVKFNWIARREIALGIARGLAYIHEE 169
             G ++ ++  NW  R++I +GIARGLAY+HEE
Sbjct: 759 --GPQETQIPLNWPMRQKICVGIARGLAYLHEE 789

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|C0LGH2|Y1561_ARATH Probable LRR receptor-like serine/threonine-protein kinase At1g56130 OS=Arabidopsis thaliana GN=At1g56130 PE=1 SV=2

 Score =  116 bits (291), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 69/159 (43%), Positives = 94/159 (59%), Gaps = 29/159 (18%)

Query: 15  KVQGYKFSKISYNELKIATNGFRTSNKIGEGGFGSVYKGRLEDGTVVAVNVLSVESKQGE 74
            V+ Y F+   Y+ELK AT  F  SNK+GEGGFG VYKG L DG VVAV +LSV S+QG+
Sbjct: 676 DVKPYIFT---YSELKSATQDFDPSNKLGEGGFGPVYKGNLNDGRVVAVKLLSVGSRQGK 732

Query: 75  TEFMSEVASMANINICHENLVKLHGGCIDGPSRILA----PLQASIEALFLFTKLWKMDK 130
            +F++E+ +++  ++ H NLVKL+G C +G  R+L     P  +  +ALF          
Sbjct: 733 GQFVAEIVAIS--SVLHRNLVKLYGCCFEGEHRMLVYEYLPNGSLDQALF---------- 780

Query: 131 FISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEE 169
                   G K   +  +W  R EI LG+ARGL Y+HEE
Sbjct: 781 --------GDKT--LHLDWSTRYEICLGVARGLVYLHEE 809

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|C0LGH3|Y5614_ARATH Probable LRR receptor-like serine/threonine-protein kinase At1g56140 OS=Arabidopsis thaliana GN=At1g56140 PE=1 SV=2

 Score =  115 bits (289), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 69/163 (42%), Positives = 95/163 (58%), Gaps = 29/163 (17%)

Query: 13  SRKVQGYKFSKISYNELKIATNGFRTSNKIGEGGFGSVYKGRLEDGTVVAVNVLSVESKQ 72
           S  V+ Y F+   Y+ELK AT  F  SNK+GEGGFG VYKG+L DG  VAV +LSV S+Q
Sbjct: 673 SMDVKPYTFT---YSELKSATQDFDPSNKLGEGGFGPVYKGKLNDGREVAVKLLSVGSRQ 729

Query: 73  GETEFMSEVASMANINICHENLVKLHGGCIDGPSRILA----PLQASIEALFLFTKLWKM 128
           G+ +F++E+ +++ +   H NLVKL+G C +G  R+L     P  +  +ALF        
Sbjct: 730 GKGQFVAEIVAISAVQ--HRNLVKLYGCCYEGEHRLLVYEYLPNGSLDQALF-------- 779

Query: 129 DKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEIK 171
                     G K   +  +W  R EI LG+ARGL Y+HEE +
Sbjct: 780 ----------GEKT--LHLDWSTRYEICLGVARGLVYLHEEAR 810

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q9ASQ6|Y1972_ARATH Probable LRR receptor-like serine/threonine-protein kinase At1g29720 OS=Arabidopsis thaliana GN=RFK1 PE=2 SV=3

 Score =  114 bits (284), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 65/170 (38%), Positives = 99/170 (58%), Gaps = 31/170 (18%)

Query: 15  KVQGYKFSKISYNELKIATNGFRTSNKIGEGGFGSVYKGRLEDGTVVAVNVLSVESKQGE 74
           + QG +    S+ +L+ ATN F  +NK+GEGGFGSV+KG L DGT++AV  LS +S QG 
Sbjct: 652 RAQGLQTVCFSWRQLQTATNNFDQANKLGEGGFGSVFKGELSDGTIIAVKQLSSKSSQGN 711

Query: 75  TEFMSEVASMANINICHENLVKLHGGCIDGPSRILA--PLQASIEALFLFTKLWKMDKFI 132
            EF++E+  ++ +N  H NLVKL+G C++    +L    ++ +  AL LF          
Sbjct: 712 REFVNEIGMISGLN--HPNLVKLYGCCVERDQLLLVYEYMENNSLALALF---------- 759

Query: 133 SIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHE---------EIKTT 173
                    +N +K +W AR++I +GIARGL ++H+         +IKTT
Sbjct: 760 --------GQNSLKLDWAARQKICVGIARGLEFLHDGSAMRMVHRDIKTT 801

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|C0LGG8|Y5343_ARATH Probable LRR receptor-like serine/threonine-protein kinase At1g53430 OS=Arabidopsis thaliana GN=At1g53430 PE=1 SV=1

 Score =  113 bits (282), Expect = 7e-25,   Method: Composition-based stats.
 Identities = 63/147 (42%), Positives = 87/147 (59%), Gaps = 20/147 (13%)

Query: 25  SYNELKIATNGFRTSNKIGEGGFGSVYKGRLEDGTVVAVNVLSVESKQGETEFMSEVASM 84
           +  ++K ATN F   NKIGEGGFG VYKG L DG  +AV  LS +SKQG  EF++E+  +
Sbjct: 658 TLKQIKRATNNFDPENKIGEGGFGPVYKGVLADGMTIAVKQLSSKSKQGNREFVTEIGMI 717

Query: 85  ANINICHENLVKLHGGCIDGPSRILA--PLQASIEALFLFTKLWKMDKFISIYVVSGSKK 142
           + +   H NLVKL+G CI+G   +L    L+ +  A  LF                G++K
Sbjct: 718 SALQ--HPNLVKLYGCCIEGKELLLVYEYLENNSLARALF----------------GTEK 759

Query: 143 NRVKFNWIARREIALGIARGLAYIHEE 169
            R+  +W  R +I +GIA+GLAY+HEE
Sbjct: 760 QRLHLDWSTRNKICIGIAKGLAYLHEE 786

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|C0LGG9|Y5344_ARATH Probable LRR receptor-like serine/threonine-protein kinase At1g53440 OS=Arabidopsis thaliana GN=At1g53440 PE=1 SV=2

 Score =  112 bits (281), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 62/147 (42%), Positives = 87/147 (59%), Gaps = 20/147 (13%)

Query: 25  SYNELKIATNGFRTSNKIGEGGFGSVYKGRLEDGTVVAVNVLSVESKQGETEFMSEVASM 84
           +  ++K ATN F   NKIGEGGFG VYKG L DG  +AV  LS +SKQG  EF++E+  +
Sbjct: 656 TLKQIKRATNNFDPENKIGEGGFGPVYKGVLADGMTIAVKQLSSKSKQGNREFVTEIGMI 715

Query: 85  ANINICHENLVKLHGGCIDGPSRILA--PLQASIEALFLFTKLWKMDKFISIYVVSGSKK 142
           + +   H NLVKL+G CI+G   +L    L+ +  A  LF                G++K
Sbjct: 716 SALQ--HPNLVKLYGCCIEGKELLLVYEYLENNSLARALF----------------GTEK 757

Query: 143 NRVKFNWIARREIALGIARGLAYIHEE 169
            R+  +W  R ++ +GIA+GLAY+HEE
Sbjct: 758 QRLHLDWSTRNKVCIGIAKGLAYLHEE 784

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|O64780|Y1614_ARATH G-type lectin S-receptor-like serine/threonine-protein kinase At1g61400 OS=Arabidopsis thaliana GN=At1g61400 PE=2 SV=4

 Score =  107 bits (267), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 59/157 (37%), Positives = 94/157 (59%), Gaps = 19/157 (12%)

Query: 13  SRKVQGYKFSKISYNELKIATNGFRTSNKIGEGGFGSVYKGRLEDGTVVAVNVLSVESKQ 72
           ++ V G ++ ++  N ++ ATN F  SNK+G GGFGSVYKG+L+DG  +AV  LS  S+Q
Sbjct: 479 TQDVPGLEYFEM--NTIQTATNNFSLSNKLGHGGFGSVYKGKLQDGREIAVKRLSSSSEQ 536

Query: 73  GETEFMSEVASMANINICHENLVKLHGGCIDGPSRILAPLQASIEALFLFTKLWKMDKFI 132
           G+ EFM+E+  ++ +   H NLV++ G C++G  ++L         ++ F K   +D F+
Sbjct: 537 GKQEFMNEIVLISKLQ--HRNLVRVLGCCVEGTEKLL---------IYEFMKNKSLDTFV 585

Query: 133 SIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEE 169
                    K R++ +W  R +I  GIARGL Y+H +
Sbjct: 586 F------DSKKRLEIDWPKRFDIIQGIARGLLYLHRD 616

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|O64770|Y1649_ARATH G-type lectin S-receptor-like serine/threonine-protein kinase At1g61490 OS=Arabidopsis thaliana GN=At1g61490 PE=3 SV=1

 Score =  107 bits (267), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 61/157 (38%), Positives = 96/157 (61%), Gaps = 19/157 (12%)

Query: 13  SRKVQGYKFSKISYNELKIATNGFRTSNKIGEGGFGSVYKGRLEDGTVVAVNVLSVESKQ 72
           S++V G +F ++  N ++ ATN F  SNK+G+GGFGSVYKG+L+DG  +AV  LS  S Q
Sbjct: 469 SKEVPGLEFFEM--NTIQTATNNFSLSNKLGQGGFGSVYKGKLQDGKEIAVKQLSSSSGQ 526

Query: 73  GETEFMSEVASMANINICHENLVKLHGGCIDGPSRILAPLQASIEALFLFTKLWKMDKFI 132
           G+ EFM+E+  ++ +   H NLV++ G CI+G  ++L         ++ F     ++K +
Sbjct: 527 GKEEFMNEIVLISKLQ--HRNLVRVLGCCIEGEEKLL---------IYEFM----LNKSL 571

Query: 133 SIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEE 169
             +V    KK  ++ +W  R +I  GIARGL Y+H +
Sbjct: 572 DTFVFDARKK--LEVDWPKRFDIVQGIARGLLYLHRD 606

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	174
296086032	288	unnamed protein product [Vitis vinifera]	0.747	0.451	0.602	4e-40
224097961	340	predicted protein [Populus trichocarpa]	0.758	0.388	0.601	5e-40
225449074	449	PREDICTED: probable LRR receptor-like se	0.747	0.289	0.602	5e-40
224113013	345	predicted protein [Populus trichocarpa]	0.758	0.382	0.581	3e-39
255577375	392	ATP binding protein, putative [Ricinus c	0.758	0.336	0.554	6e-35
225439972	399	PREDICTED: putative serine/threonine-pro	0.787	0.343	0.509	6e-33
297741595	433	unnamed protein product [Vitis vinifera]	0.781	0.314	0.512	7e-33
449450984	364	PREDICTED: putative serine/threonine-pro	0.775	0.370	0.490	2e-30
255557018	378	ATP binding protein, putative [Ricinus c	0.752	0.346	0.496	2e-30
302425179	242	RecName: Full=Putative serine/threonine-	0.787	0.566	0.458	2e-29

>gi|296086032|emb|CBI31473.3| unnamed protein product [Vitis vinifera]

 Score =  169 bits (428), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 88/146 (60%), Positives = 108/146 (73%), Gaps = 16/146 (10%)

Query: 25  SYNELKIATNGFRTSNKIGEGGFGSVYKGRLEDGTVVAVNVLSVESKQGETEFMSEVASM 84
           +YNE+KIAT GFR+S+KIG+GGFGSVYKGRL+DGTVVAV VLS ESKQG+ EFMSE+AS+
Sbjct: 41  TYNEIKIATGGFRSSDKIGQGGFGSVYKGRLQDGTVVAVKVLSAESKQGDREFMSEMASI 100

Query: 85  ANINICHENLVKLHGGCIDGPSRILAPLQASIEALFLFTKLWKMDKFISIYVVSGSKKNR 144
           +NIN  HENLVKLHGGC+ G  R+L                +  +  +S  ++ G K+ R
Sbjct: 101 SNIN--HENLVKLHGGCVHGARRMLV-------------YDYMQNNSLSHTLLRGEKR-R 144

Query: 145 VKFNWIARREIALGIARGLAYIHEEI 170
            KF+W  RREI LGIARGLAYIHE+I
Sbjct: 145 AKFSWKTRREICLGIARGLAYIHEDI 170

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224097961|ref|XP_002311099.1| predicted protein [Populus trichocarpa] gi|222850919|gb|EEE88466.1| predicted protein [Populus trichocarpa]

 Score =  169 bits (427), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 89/148 (60%), Positives = 107/148 (72%), Gaps = 16/148 (10%)

Query: 25  SYNELKIATNGFRTSNKIGEGGFGSVYKGRLEDGTVVAVNVLSVESKQGETEFMSEVASM 84
           S+NELK+ATNGFR+SNKIGEGGFGSVYKG L+DG +VAV +LS  SKQG+ EF+SE+AS+
Sbjct: 11  SFNELKVATNGFRSSNKIGEGGFGSVYKGILQDGRMVAVKMLSAGSKQGDREFISEIASV 70

Query: 85  ANINICHENLVKLHGGCIDGPSRILAPLQASIEALFLFTKLWKMDKFISIYVVSGSKKNR 144
           +NIN  HENLVKLHGGCIDGP +IL                  M+       + GS++ R
Sbjct: 71  SNIN--HENLVKLHGGCIDGPYKILV--------------YDYMENGSLAQTLLGSEEKR 114

Query: 145 VKFNWIARREIALGIARGLAYIHEEIKT 172
            KF W  RREI+LGIA+GLAYIHEEIK 
Sbjct: 115 AKFRWETRREISLGIAQGLAYIHEEIKP 142

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225449074|ref|XP_002274408.1| PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At1g56130-like [Vitis vinifera]

 Score =  169 bits (427), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 88/146 (60%), Positives = 108/146 (73%), Gaps = 16/146 (10%)

Query: 25  SYNELKIATNGFRTSNKIGEGGFGSVYKGRLEDGTVVAVNVLSVESKQGETEFMSEVASM 84
           +YNE+KIAT GFR+S+KIG+GGFGSVYKGRL+DGTVVAV VLS ESKQG+ EFMSE+AS+
Sbjct: 120 TYNEIKIATGGFRSSDKIGQGGFGSVYKGRLQDGTVVAVKVLSAESKQGDREFMSEMASI 179

Query: 85  ANINICHENLVKLHGGCIDGPSRILAPLQASIEALFLFTKLWKMDKFISIYVVSGSKKNR 144
           +NIN  HENLVKLHGGC+ G  R+L                +  +  +S  ++ G K+ R
Sbjct: 180 SNIN--HENLVKLHGGCVHGARRMLV-------------YDYMQNNSLSHTLLRGEKR-R 223

Query: 145 VKFNWIARREIALGIARGLAYIHEEI 170
            KF+W  RREI LGIARGLAYIHE+I
Sbjct: 224 AKFSWKTRREICLGIARGLAYIHEDI 249

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224113013|ref|XP_002316361.1| predicted protein [Populus trichocarpa] gi|222865401|gb|EEF02532.1| predicted protein [Populus trichocarpa]

 Score =  166 bits (421), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 86/148 (58%), Positives = 105/148 (70%), Gaps = 16/148 (10%)

Query: 25  SYNELKIATNGFRTSNKIGEGGFGSVYKGRLEDGTVVAVNVLSVESKQGETEFMSEVASM 84
           S++ELK+ATNGFR+SNKIGEGGFGSVYKG L+DG +VA+ +LS ESKQG  EFMSE+AS+
Sbjct: 16  SFDELKVATNGFRSSNKIGEGGFGSVYKGVLQDGRIVAIKMLSAESKQGHREFMSEIASV 75

Query: 85  ANINICHENLVKLHGGCIDGPSRILAPLQASIEALFLFTKLWKMDKFISIYVVSGSKKNR 144
           +NIN  HENLV LHGGCIDGP +IL                  M+       + G ++NR
Sbjct: 76  SNIN--HENLVNLHGGCIDGPCKILV--------------YDYMENGSLAQTLLGGEENR 119

Query: 145 VKFNWIARREIALGIARGLAYIHEEIKT 172
            +F W  RR I+LGIA+GLAYIHEEIK 
Sbjct: 120 ARFGWETRRGISLGIAQGLAYIHEEIKP 147

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255577375|ref|XP_002529567.1| ATP binding protein, putative [Ricinus communis] gi|223530943|gb|EEF32801.1| ATP binding protein, putative [Ricinus communis]

 Score =  152 bits (383), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 82/148 (55%), Positives = 103/148 (69%), Gaps = 16/148 (10%)

Query: 25  SYNELKIATNGFRTSNKIGEGGFGSVYKGRLEDGTVVAVNVLSVESKQGETEFMSEVASM 84
           SY ELK+ATN F  SNKIGEGGFGSVYKG LE+G  VAV VLS ES+QG+ EF+SE+AS+
Sbjct: 62  SYRELKVATNSFHLSNKIGEGGFGSVYKGMLENGKFVAVKVLSAESRQGDKEFLSEIASL 121

Query: 85  ANINICHENLVKLHGGCIDGPSRILAPLQASIEALFLFTKLWKMDKFISIYVVSGSKKNR 144
           ++I+  HENLV LHG CIDGP RIL         ++ + +   + +     ++ G  K +
Sbjct: 122 SSIS--HENLVILHGACIDGPCRIL---------VYDYMENGNLAQ-----ILLGGDKIK 165

Query: 145 VKFNWIARREIALGIARGLAYIHEEIKT 172
            KF W  RREI+LGIA GLA+IHEEIK 
Sbjct: 166 RKFCWRVRREISLGIAEGLAHIHEEIKP 193

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225439972|ref|XP_002281059.1| PREDICTED: putative serine/threonine-protein kinase [Vitis vinifera] gi|147770086|emb|CAN69887.1| hypothetical protein VITISV_005073 [Vitis vinifera]

 Score =  145 bits (366), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 79/155 (50%), Positives = 102/155 (65%), Gaps = 18/155 (11%)

Query: 20  KFSKISYNELKIATNGFRTSNKIGEGGFGSVYKGRLEDGTVVAVNVLSV--ESKQGETEF 77
           KF   SY ELKIAT+ F  SNKIGEGGFGSVYKG+L DGT VAV VLSV  ES +GE EF
Sbjct: 36  KFQVFSYKELKIATDSFHPSNKIGEGGFGSVYKGQLRDGTTVAVKVLSVEIESMRGEREF 95

Query: 78  MSEVASMANINICHENLVKLHGGCIDGPSRILAPLQASIEALFLFTKLWKMDKFISIYVV 137
           +SE++++ +I   HENLV L G C++G SR            FL     + +      + 
Sbjct: 96  VSELSALTDIK--HENLVTLQGCCVEGASR------------FLVYDYMENNSLAQTLL- 140

Query: 138 SGSKKNRVKFNWIARREIALGIARGLAYIHEEIKT 172
            G+K+NR++F W ARR I+LG+ RGLAY+HEE++ 
Sbjct: 141 -GAKQNRMEFGWEARRGISLGVGRGLAYLHEEVQP 174

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297741595|emb|CBI32727.3| unnamed protein product [Vitis vinifera]

 Score =  145 bits (365), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 79/154 (51%), Positives = 102/154 (66%), Gaps = 18/154 (11%)

Query: 20  KFSKISYNELKIATNGFRTSNKIGEGGFGSVYKGRLEDGTVVAVNVLSV--ESKQGETEF 77
           KF   SY ELKIAT+ F  SNKIGEGGFGSVYKG+L DGT VAV VLSV  ES +GE EF
Sbjct: 70  KFQVFSYKELKIATDSFHPSNKIGEGGFGSVYKGQLRDGTTVAVKVLSVEIESMRGEREF 129

Query: 78  MSEVASMANINICHENLVKLHGGCIDGPSRILAPLQASIEALFLFTKLWKMDKFISIYVV 137
           +SE++++ +I   HENLV L G C++G SR            FL     + +      + 
Sbjct: 130 VSELSALTDIK--HENLVTLQGCCVEGASR------------FLVYDYMENNSLAQTLL- 174

Query: 138 SGSKKNRVKFNWIARREIALGIARGLAYIHEEIK 171
            G+K+NR++F W ARR I+LG+ RGLAY+HEE++
Sbjct: 175 -GAKQNRMEFGWEARRGISLGVGRGLAYLHEEVQ 207

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449450984|ref|XP_004143242.1| PREDICTED: putative serine/threonine-protein kinase-like [Cucumis sativus] gi|449482501|ref|XP_004156301.1| PREDICTED: putative serine/threonine-protein kinase-like [Cucumis sativus]

 Score =  137 bits (345), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 75/153 (49%), Positives = 101/153 (66%), Gaps = 18/153 (11%)

Query: 21  FSKISYNELKIATNGFRTSNKIGEGGFGSVYKGRLEDGTVVAVNVLS--VESKQGETEFM 78
           F   SYNELK+ATNGF  +NK+GEGGFG+VYKG L D   +AV VLS  VES +GE EF+
Sbjct: 32  FRVYSYNELKLATNGFSGANKVGEGGFGTVYKGWLRDDRKIAVKVLSIEVESMRGEREFI 91

Query: 79  SEVASMANINICHENLVKLHGGCIDGPSRILAPLQASIEALFLFTKLWKMDKFISIYVVS 138
           +E+ S++NI   HENLV+L G  +DG +R L        +L               YV+ 
Sbjct: 92  AELTSLSNIR--HENLVELKGFYVDGSNRYLVYDYMENNSL--------------AYVLQ 135

Query: 139 GSKKNRVKFNWIARREIALGIARGLAYIHEEIK 171
           G ++NR++  WIAR+EI +G+ARGLAY+HEE++
Sbjct: 136 GVRENRMRLRWIARKEILIGVARGLAYLHEEVE 168

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255557018|ref|XP_002519542.1| ATP binding protein, putative [Ricinus communis] gi|223541405|gb|EEF42956.1| ATP binding protein, putative [Ricinus communis]

 Score =  136 bits (343), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 74/149 (49%), Positives = 102/149 (68%), Gaps = 18/149 (12%)

Query: 25  SYNELKIATNGFRTSNKIGEGGFGSVYKGRLEDGTVVAVNVLSV--ESKQGETEFMSEVA 82
           S  EL+IAT+ F +SNK+GEG FGSVY G+L++G++VAV VLSV  ES +GE EF+SE+A
Sbjct: 37  SSRELEIATHDFSSSNKVGEGAFGSVYMGQLKNGSIVAVKVLSVELESMRGEREFISELA 96

Query: 83  SMANINICHENLVKLHGGCIDGPSRILAPLQASIEALFLFTKLWKMDKFISIYVVSGSKK 142
           ++++I+  HENLVKL G C+DG +R L                  M+       + G ++
Sbjct: 97  ALSDIS--HENLVKLQGCCVDGANRYLV--------------YDYMENNSLTQTLLGKEQ 140

Query: 143 NRVKFNWIARREIALGIARGLAYIHEEIK 171
           NR+KF+W ARR I+ G+ARGLAYIHEE+K
Sbjct: 141 NRMKFSWEARRNISFGVARGLAYIHEEVK 169

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|302425179|sp|P85193.1|PK01_HELAN RecName: Full=Putative serine/threonine-protein kinase

 Score =  133 bits (335), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 71/155 (45%), Positives = 98/155 (63%), Gaps = 18/155 (11%)

Query: 18  GYKFSKISYNELKIATNGFRTSNKIGEGGFGSVYKGRLEDGTVVAVNVLSV--ESKQGET 75
           G KF   SY+ELK+A +GF + NK+GEGG G+VYKGRL DGT+VA+ VLSV  ES +GE 
Sbjct: 31  GKKFRLFSYHELKVACDGFSSKNKVGEGGCGAVYKGRLTDGTMVAIKVLSVELESMRGER 90

Query: 76  EFMSEVASMANINICHENLVKLHGGCIDGPSRILAPLQASIEALFLFTKLWKMDKFISIY 135
           EF+SE+A++++    HENLV LHG C++  +R L        +L               Y
Sbjct: 91  EFISEIAALSDAQ--HENLVNLHGCCVEEATRCLVYDYMENNSL--------------AY 134

Query: 136 VVSGSKKNRVKFNWIARREIALGIARGLAYIHEEI 170
              G ++NR  F+W  R+ + LG+A+ LAY+HEEI
Sbjct: 135 QFLGREQNRNSFDWTKRKNVLLGVAKALAYLHEEI 169

Source: Helianthus annuus

Species: Helianthus annuus

Genus: Helianthus

Family: Asteraceae

Order: Asterales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	174
TAIR|locus:2017923	390	AT1G16670 [Arabidopsis thalian	0.758	0.338	0.431	2.8e-27
TAIR|locus:2009630	953	AT1G53420 [Arabidopsis thalian	0.758	0.138	0.418	2.3e-24
TAIR|locus:2019317	969	AT1G29730 [Arabidopsis thalian	0.5	0.089	0.516	3.4e-24
TAIR|locus:2095334	393	AT3G09010 [Arabidopsis thalian	0.752	0.333	0.442	1.1e-23
TAIR|locus:2203718	1035	AT1G53440 [Arabidopsis thalian	0.827	0.139	0.382	4.6e-22
TAIR|locus:2026925	708	PERK9 "proline-rich extensin-l	0.557	0.137	0.475	5e-21
TAIR|locus:2139474	670	PERK5 "proline-rich extensin-l	0.517	0.134	0.478	5.6e-21
TAIR|locus:2197724	806	AT1G61430 [Arabidopsis thalian	0.793	0.171	0.387	4.3e-20
TAIR|locus:2203847	1021	RKF1 "receptor-like kinase in	0.724	0.123	0.408	7.9e-20
TAIR|locus:2091980	432	CDG1 "CONSTITUTIVE DIFFERENTIA	0.775	0.312	0.377	1.9e-19

TAIR|locus:2017923 AT1G16670 [Arabidopsis thaliana (taxid:3702)]

 Score = 306 (112.8 bits), Expect = 2.8e-27, P = 2.8e-27
 Identities = 63/146 (43%), Positives = 97/146 (66%)

Query:    26 YNELKIATNGFRTSNKIGEGGFGSVYKGRLEDGTVVAVNVLSVESKQGETEFMSEVASMA 85
             Y E++ AT+ F   NKIGEGGFGSVYKG L+DG + A+ VLS ES+QG  EF++E+  ++
Sbjct:    31 YREIRQATDDFSAENKIGEGGFGSVYKGCLKDGKLAAIKVLSAESRQGVKEFLTEINVIS 90

Query:    86 NINICHENLVKLHGGCIDGPSRILAPLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRV 145
              I   HENLVKL+G C++G  RIL         ++ F +   +DK +   +  G  ++ +
Sbjct:    91 EIQ--HENLVKLYGCCVEGNHRIL---------VYNFLENNSLDKTL---LAGGYTRSGI 136

Query:   146 KFNWIARREIALGIARGLAYIHEEIK 171
             +F+W +R  I +G+A+GLA++HEE++
Sbjct:   137 QFDWSSRANICVGVAKGLAFLHEEVR 162

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA;IDA

GO:0005524 "ATP binding" evidence=IEA

GO:0005886 "plasma membrane" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0046777 "protein autophosphorylation" evidence=IDA

GO:0009627 "systemic acquired resistance" evidence=RCA

GO:0009697 "salicylic acid biosynthetic process" evidence=RCA

GO:0009863 "salicylic acid mediated signaling pathway" evidence=RCA

GO:0030968 "endoplasmic reticulum unfolded protein response" evidence=RCA

GO:0031348 "negative regulation of defense response" evidence=RCA

GO:0045087 "innate immune response" evidence=RCA

TAIR|locus:2009630 AT1G53420 [Arabidopsis thaliana (taxid:3702)]

 Score = 290 (107.1 bits), Expect = 2.3e-24, P = 2.3e-24
 Identities = 62/148 (41%), Positives = 95/148 (64%)

Query:    22 SKISYNELKIATNGFRTSNKIGEGGFGSVYKGRLEDGTVVAVNVLSVESKQGETEFMSEV 81
             +  S  ++KIATN F ++N+IGEGGFG VYKG+L DGT++AV  LS  SKQG  EF++E+
Sbjct:   610 ASFSLRQIKIATNNFDSANRIGEGGFGPVYKGKLFDGTIIAVKQLSTGSKQGNREFLNEI 669

Query:    82 ASMANINICHENLVKLHGGCIDGPSRILAPLQASIEALFLFTKLWKMDKFISIYVVSGSK 141
               ++ ++  H NLVKL+G C++G   +L  +   +E   L   L+            G +
Sbjct:   670 GMISALH--HPNLVKLYGCCVEGGQLLL--VYEFVENNSLARALF------------GPQ 713

Query:   142 KNRVKFNWIARREIALGIARGLAYIHEE 169
             + +++ +W  RR+I +G+ARGLAY+HEE
Sbjct:   714 ETQLRLDWPTRRKICIGVARGLAYLHEE 741

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA;ISS

GO:0004713 "protein tyrosine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA;ISS

GO:0005886 "plasma membrane" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA;ISS

GO:0007169 "transmembrane receptor protein tyrosine kinase signaling pathway" evidence=ISS

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0009506 "plasmodesma" evidence=IDA

TAIR|locus:2019317 AT1G29730 [Arabidopsis thaliana (taxid:3702)]

 Score = 226 (84.6 bits), Expect = 3.4e-24, Sum P(2) = 3.4e-24
 Identities = 47/91 (51%), Positives = 63/91 (69%)

Query:    15 KVQG--YKFSKISYNELKIATNGFRTSNKIGEGGFGSVYKGRLEDGTVVAVNVLSVESKQ 72
             K++G   +    S  +LK+ATN F   NKIGEGGFGSVYKGRL DGT++AV  LS +S Q
Sbjct:   617 KLKGPDLRTGSFSLRQLKVATNDFDPLNKIGEGGFGSVYKGRLPDGTLIAVKKLSSKSHQ 676

Query:    73 GETEFMSEVASMANINICHENLVKLHGGCID 103
             G  EF++E+  +A +   H NLVKL+G C++
Sbjct:   677 GNKEFVNEIGMIACLQ--HPNLVKLYGCCVE 705

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA;ISS

GO:0004713 "protein tyrosine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005886 "plasma membrane" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

TAIR|locus:2095334 AT3G09010 [Arabidopsis thaliana (taxid:3702)]

 Score = 272 (100.8 bits), Expect = 1.1e-23, P = 1.1e-23
 Identities = 65/147 (44%), Positives = 90/147 (61%)

Query:    25 SYNELKIATNGFRTSNKIGEGGFGSVYKGRLEDGTVVAVNVLSVESKQGETEFMSEVASM 84
             SYN L+ AT+ F  +N+IG GG+G V+KG L DGT VAV  LS ESKQG  EF++E+  +
Sbjct:    35 SYNSLRSATDSFHPTNRIGGGGYGVVFKGVLRDGTQVAVKSLSAESKQGTREFLTEINLI 94

Query:    85 ANINICHENLVKLHGGCIDGPSRILAPLQASIEALFLFTKLWKMDKFISIYVVSGSKKNR 144
             +NI+  H NLVKL G CI+G +RIL       E L       + +   S+ +  GS+   
Sbjct:    95 SNIH--HPNLVKLIGCCIEGNNRILV-----YEYL-------ENNSLASVLL--GSRSRY 138

Query:   145 VKFNWIARREIALGIARGLAYIHEEIK 171
             V  +W  R  I +G A GLA++HEE++
Sbjct:   139 VPLDWSKRAAICVGTASGLAFLHEEVE 165

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0002237 "response to molecule of bacterial origin" evidence=RCA

GO:0009581 "detection of external stimulus" evidence=RCA

GO:0009595 "detection of biotic stimulus" evidence=RCA

GO:0010200 "response to chitin" evidence=RCA

TAIR|locus:2203718 AT1G53440 [Arabidopsis thaliana (taxid:3702)]

 Score = 269 (99.8 bits), Expect = 4.6e-22, P = 4.6e-22
 Identities = 62/162 (38%), Positives = 95/162 (58%)

Query:    10 INYSRKVQGYKFSKISYN--ELKIATNGFRTSNKIGEGGFGSVYKGRLEDGTVVAVNVLS 67
             ++ + +++G      S+   ++K ATN F   NKIGEGGFG VYKG L DG  +AV  LS
Sbjct:   639 VDENEELRGLDLQTGSFTLKQIKRATNNFDPENKIGEGGFGPVYKGVLADGMTIAVKQLS 698

Query:    68 VESKQGETEFMSEVASMANINICHENLVKLHGGCIDGPSRILAPLQASIEALFLFTKLWK 127
              +SKQG  EF++E+  ++ +   H NLVKL+G CI+G            E L ++  L  
Sbjct:   699 SKSKQGNREFVTEIGMISALQ--HPNLVKLYGCCIEGK-----------ELLLVYEYLEN 745

Query:   128 MDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEE 169
                  +++   G++K R+  +W  R ++ +GIA+GLAY+HEE
Sbjct:   746 NSLARALF---GTEKQRLHLDWSTRNKVCIGIAKGLAYLHEE 784

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0004713 "protein tyrosine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005886 "plasma membrane" evidence=ISM;IDA

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

TAIR|locus:2026925 PERK9 "proline-rich extensin-like receptor kinase 9" [Arabidopsis thaliana (taxid:3702)]

 Score = 209 (78.6 bits), Expect = 5.0e-21, Sum P(2) = 5.0e-21
 Identities = 48/101 (47%), Positives = 61/101 (60%)

Query:    11 NYSRKVQGYKFSK--ISYNELKIATNGFRTSNKIGEGGFGSVYKGRLEDGTVVAVNVLSV 68
             +Y  +  G   SK   SY EL  ATNGF   N +GEGGFG VYKG L DG VVAV  L +
Sbjct:   350 SYQSQSGGLGNSKALFSYEELVKATNGFSQENLLGEGGFGCVYKGILPDGRVVAVKQLKI 409

Query:    69 ESKQGETEFMSEVASMANINICHENLVKLHGGCIDGPSRIL 109
                QG+ EF +EV +++ I+  H +LV + G CI G  R+L
Sbjct:   410 GGGQGDREFKAEVETLSRIH--HRHLVSIVGHCISGDRRLL 448

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005886 "plasma membrane" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

TAIR|locus:2139474 PERK5 "proline-rich extensin-like receptor kinase 5" [Arabidopsis thaliana (taxid:3702)]

 Score = 200 (75.5 bits), Expect = 5.6e-21, Sum P(2) = 5.6e-21
 Identities = 44/92 (47%), Positives = 58/92 (63%)

Query:    18 GYKFSKISYNELKIATNGFRTSNKIGEGGFGSVYKGRLEDGTVVAVNVLSVESKQGETEF 77
             G+  S  +Y+EL IAT GF  SN +G+GGFG V+KG L  G  VAV  L + S QGE EF
Sbjct:   294 GHNQSTFTYDELSIATEGFAQSNLLGQGGFGYVHKGVLPSGKEVAVKSLKLGSGQGEREF 353

Query:    78 MSEVASMANINICHENLVKLHGGCIDGPSRIL 109
              +EV  ++ ++  H +LV L G CI G  R+L
Sbjct:   354 QAEVDIISRVH--HRHLVSLVGYCISGGQRLL 383

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA;IDA

GO:0005524 "ATP binding" evidence=IEA

GO:0005886 "plasma membrane" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0046777 "protein autophosphorylation" evidence=IDA

GO:0009827 "plant-type cell wall modification" evidence=RCA

GO:0009860 "pollen tube growth" evidence=RCA

GO:0048610 "cellular process involved in reproduction" evidence=RCA

GO:0048868 "pollen tube development" evidence=RCA

GO:0051510 "regulation of unidimensional cell growth" evidence=RCA

TAIR|locus:2197724 AT1G61430 [Arabidopsis thaliana (taxid:3702)]

 Score = 249 (92.7 bits), Expect = 4.3e-20, P = 4.3e-20
 Identities = 62/160 (38%), Positives = 94/160 (58%)

Query:    13 SRKVQGYKFSKISYNELKIATNGFRTSNKIGEGGFGSVYK---GRLEDGTVVAVNVLSVE 69
             S+ V G +F ++  N ++ ATN F  SNK+G GGFGSVYK   G+L+DG  +AV  LS  
Sbjct:   468 SQDVPGLEFFEM--NAIQTATNNFSLSNKLGPGGFGSVYKARNGKLQDGREIAVKRLSSS 525

Query:    70 SKQGETEFMSEVASMANINICHENLVKLHGGCIDGPSRILAPLQASIEALFLFTKLWKMD 129
             S QG+ EFM+E+  ++ +   H NLV++ G C++G  ++L         ++ F K    +
Sbjct:   526 SGQGKQEFMNEIVLISKLQ--HRNLVRVLGCCVEGTEKLL---------IYGFLK----N 570

Query:   130 KFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEE 169
             K +  +V    KK  ++ +W  R EI  GIARGL Y+H +
Sbjct:   571 KSLDTFVFDARKK--LELDWPKRFEIIEGIARGLLYLHRD 608

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0004713 "protein tyrosine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005886 "plasma membrane" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0030246 "carbohydrate binding" evidence=IEA;ISS

GO:0048544 "recognition of pollen" evidence=IEA

TAIR|locus:2203847 RKF1 "receptor-like kinase in flowers 1" [Arabidopsis thaliana (taxid:3702)]

 Score = 248 (92.4 bits), Expect = 7.9e-20, P = 7.9e-20
 Identities = 58/142 (40%), Positives = 86/142 (60%)

Query:    28 ELKIATNGFRTSNKIGEGGFGSVYKGRLEDGTVVAVNVLSVESKQGETEFMSEVASMANI 87
             ++K AT+ F  +NKIGEGGFG+V+KG L DG VVAV  LS +S+QG  EF++E+ +++ +
Sbjct:   673 QIKFATDDFNPTNKIGEGGFGAVFKGVLADGRVVAVKQLSSKSRQGNREFLNEIGAISCL 732

Query:    88 NICHENLVKLHGGCIDGPSRILAPLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKF 147
                H NLVKLHG C++    +LA     +E   L + L+              K  ++  
Sbjct:   733 Q--HPNLVKLHGFCVERAQLLLA--YEYMENNSLSSALFS------------PKHKQIPM 776

Query:   148 NWIARREIALGIARGLAYIHEE 169
             +W  R +I  GIA+GLA++HEE
Sbjct:   777 DWPTRFKICCGIAKGLAFLHEE 798

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA;ISS;IDA

GO:0004713 "protein tyrosine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA;ISS

GO:0005886 "plasma membrane" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA;ISS

GO:0007169 "transmembrane receptor protein tyrosine kinase signaling pathway" evidence=ISS

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0006857 "oligopeptide transport" evidence=RCA

GO:0004702 "receptor signaling protein serine/threonine kinase activity" evidence=ISS

TAIR|locus:2091980 CDG1 "CONSTITUTIVE DIFFERENTIAL GROWTH 1" [Arabidopsis thaliana (taxid:3702)]

 Score = 237 (88.5 bits), Expect = 1.9e-19, P = 1.9e-19
 Identities = 57/151 (37%), Positives = 85/151 (56%)

Query:    19 YKFSKISYNELKIATNGFRTSNKIGEGGFGSVYKGRLEDGTVVAVNVLSVESKQGETEFM 78
             Y+    SY EL IATN FR  + IG GGFG+VYKGRL  G  +AV +L     QG+ EF+
Sbjct:    57 YRCQIFSYRELAIATNSFRNESLIGRGGFGTVYKGRLSTGQNIAVKMLDQSGIQGDKEFL 116

Query:    79 SEVASMANINICHENLVKLHGGCIDGPSRILAPLQASIEALFLFTKLWKMDKFISIYVVS 138
              EV  ++ ++  H NLV L G C +G  R++         ++ +  L  ++  +  Y +S
Sbjct:   117 VEVLMLSLLH--HRNLVHLFGYCAEGDQRLV---------VYEYMPLGSVEDHL--YDLS 163

Query:   139 GSKKNRVKFNWIARREIALGIARGLAYIHEE 169
               ++     +W  R +IALG A+GLA++H E
Sbjct:   164 EGQE---ALDWKTRMKIALGAAKGLAFLHNE 191

GO:0005886 "plasma membrane" evidence=ISM;IDA

GO:0016301 "kinase activity" evidence=ISS

GO:0040007 "growth" evidence=IMP

GO:0004672 "protein kinase activity" evidence=IDA

GO:1900459 "positive regulation of brassinosteroid mediated signaling pathway" evidence=IMP

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: GSVIVG00018208001 SubName- Full=Chromosome chr13 scaffold_17, whole genome shotgun sequence; (370 aa) (Vitis vinifera)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	174
smart00219	257	smart00219, TyrKc, Tyrosine kinase, catalytic doma	9e-17
pfam07714	258	pfam07714, Pkinase_Tyr, Protein tyrosine kinase	3e-15
smart00221	258	smart00221, STYKc, Protein kinase; unclassified sp	5e-15
cd00180	215	cd00180, PKc, Catalytic domain of Protein Kinases	3e-13
cd00192	262	cd00192, PTKc, Catalytic domain of Protein Tyrosin	8e-13
pfam00069	260	pfam00069, Pkinase, Protein kinase domain	1e-10
cd06627	254	cd06627, STKc_Cdc7_like, Catalytic domain of Cell	2e-10
cd05122	253	cd05122, PKc_STE, Catalytic domain of STE family P	1e-09
cd05038	284	cd05038, PTKc_Jak_rpt2, Catalytic (repeat 2) domai	3e-09
cd05049	280	cd05049, PTKc_Trk, Catalytic domain of the Protein	3e-09
smart00220	254	smart00220, S_TKc, Serine/Threonine protein kinase	4e-09
cd05148	261	cd05148, PTKc_Srm_Brk, Catalytic domain of the Pro	7e-09
cd05050	288	cd05050, PTKc_Musk, Catalytic domain of the Protei	6e-08
cd05040	257	cd05040, PTKc_Ack_like, Catalytic domain of the Pr	2e-07
cd05060	257	cd05060, PTKc_Syk_like, Catalytic domain of Spleen	4e-07
cd05035	273	cd05035, PTKc_Axl_like, Catalytic Domain of Axl-li	6e-07
cd05056	270	cd05056, PTKc_FAK, Catalytic domain of the Protein	8e-07
cd05041	251	cd05041, PTKc_Fes_like, Catalytic domain of Fes-li	1e-06
cd06608	275	cd06608, STKc_myosinIII_like, Catalytic domain of	4e-06
cd06613	262	cd06613, STKc_MAP4K3_like, Catalytic domain of Mit	7e-06
cd06626	264	cd06626, STKc_MEKK4, Catalytic domain of the Prote	1e-05
cd05044	269	cd05044, PTKc_c-ros, Catalytic domain of the Prote	2e-05
cd07838	287	cd07838, STKc_CDK4_6_like, Catalytic domain of Cyc	2e-05
cd07840	287	cd07840, STKc_CDK9_like, Catalytic domain of Cycli	2e-05
cd05093	288	cd05093, PTKc_TrkB, Catalytic domain of the Protei	2e-05
cd05036	277	cd05036, PTKc_ALK_LTK, Catalytic domain of the Pro	3e-05
cd06917	277	cd06917, STKc_NAK1_like, Catalytic domain of Funga	3e-05
cd08530	256	cd08530, STKc_CNK2-like, Catalytic domain of the P	4e-05
cd07832	286	cd07832, STKc_CCRK, Catalytic domain of the Serine	4e-05
cd06632	258	cd06632, STKc_MEKK1_plant, Catalytic domain of the	5e-05
cd05034	261	cd05034, PTKc_Src_like, Catalytic domain of Src ki	5e-05
cd07830	283	cd07830, STKc_MAK_like, Catalytic domain of Male g	6e-05
cd05094	291	cd05094, PTKc_TrkC, Catalytic domain of the Protei	6e-05
cd05039	256	cd05039, PTKc_Csk_like, Catalytic domain of C-term	6e-05
cd05052	263	cd05052, PTKc_Abl, Catalytic domain of the Protein	7e-05
cd05057	279	cd05057, PTKc_EGFR_like, Catalytic domain of Epide	7e-05
cd05085	250	cd05085, PTKc_Fer, Catalytic domain of the Protein	8e-05
cd05112	256	cd05112, PTKc_Itk, Catalytic domain of the Protein	8e-05
cd06606	260	cd06606, STKc_MAPKKK, Catalytic domain of the Prot	9e-05
cd05068	261	cd05068, PTKc_Frk_like, Catalytic domain of Fyn-re	1e-04
cd06612	256	cd06612, STKc_MST1_2, Catalytic domain of the Prot	1e-04
cd06609	274	cd06609, STKc_MST3_like, Catalytic domain of Mamma	1e-04
cd05033	266	cd05033, PTKc_EphR, Catalytic domain of Ephrin Rec	1e-04
cd05032	277	cd05032, PTKc_InsR_like, Catalytic domain of Insul	2e-04
COG0515	384	COG0515, SPS1, Serine/threonine protein kinase [Ge	2e-04
cd05048	283	cd05048, PTKc_Ror, Catalytic Domain of the Protein	2e-04
cd05059	256	cd05059, PTKc_Tec_like, Catalytic domain of Tec-li	3e-04
cd08215	258	cd08215, STKc_Nek, Catalytic domain of the Protein	3e-04
cd07836	284	cd07836, STKc_Pho85, Catalytic domain of the Serin	3e-04
cd06644	292	cd06644, STKc_STK10_LOK, Catalytic domain of the P	4e-04
cd06636	282	cd06636, STKc_MAP4K4_6, Catalytic domain of the Pr	4e-04
cd07839	284	cd07839, STKc_CDK5, Catalytic domain of the Serine	5e-04
cd05113	256	cd05113, PTKc_Btk_Bmx, Catalytic domain of the Pro	5e-04
cd05118	283	cd05118, STKc_CMGC, Catalytic domain of CMGC famil	5e-04
cd06637	272	cd06637, STKc_TNIK, Catalytic domain of the Protei	6e-04
cd05110	303	cd05110, PTKc_HER4, Catalytic domain of the Protei	6e-04
cd05045	290	cd05045, PTKc_RET, Catalytic domain of the Protein	6e-04
cd07829	282	cd07829, STKc_CDK_like, Catalytic domain of Cyclin	6e-04
cd07860	284	cd07860, STKc_CDK2_3, Catalytic domain of the Seri	8e-04
cd05075	272	cd05075, PTKc_Axl, Catalytic domain of the Protein	0.001
cd05090	283	cd05090, PTKc_Ror1, Catalytic domain of the Protei	0.002
cd08224	267	cd08224, STKc_Nek6_Nek7, Catalytic domain of the P	0.002
cd06611	280	cd06611, STKc_SLK_like, Catalytic domain of Ste20-	0.002
cd06643	282	cd06643, STKc_SLK, Catalytic domain of the Protein	0.002
cd07835	283	cd07835, STKc_CDK1_like, Catalytic domain of Cycli	0.002
cd05092	280	cd05092, PTKc_TrkA, Catalytic domain of the Protei	0.003
cd06614	286	cd06614, STKc_PAK, Catalytic domain of the Protein	0.004
cd05065	269	cd05065, PTKc_EphR_B, Catalytic domain of the Prot	0.004
cd07869	303	cd07869, STKc_PFTAIRE1, Catalytic domain of the Se	0.004
cd05071	262	cd05071, PTKc_Src, Catalytic domain of the Protein	0.004
cd05083	254	cd05083, PTKc_Chk, Catalytic domain of the Protein	0.004

>gnl|CDD|197581 smart00219, TyrKc, Tyrosine kinase, catalytic domain

 Score = 74.5 bits (184), Expect = 9e-17
 Identities = 41/139 (29%), Positives = 58/139 (41%), Gaps = 35/139 (25%)

Query: 41  KIGEGGFGSVYKGRLED-----GTVVAVNVLSVE-SKQGETEFMSEVASMANINICHENL 94
           K+GEG FG VYKG+L+         VAV  L  + S+Q   EF+ E   M  ++  H N+
Sbjct: 6   KLGEGAFGEVYKGKLKGKGGKKKVEVAVKTLKEDASEQQIEEFLREARIMRKLD--HPNV 63

Query: 95  VKLHGGCIDGPSRILAPLQASIEALFLFTKLWKMDKFISIYVVSGS-----KKNRVKFNW 149
           VKL G C +     +                      +  Y+  G      +KNR K + 
Sbjct: 64  VKLLGVCTEEEPLYI----------------------VMEYMEGGDLLSYLRKNRPKLSL 101

Query: 150 IARREIALGIARGLAYIHE 168
                 AL IARG+ Y+  
Sbjct: 102 SDLLSFALQIARGMEYLES 120

Phosphotransferases. Tyrosine-specific kinase subfamily. Length = 257

>gnl|CDD|219530 pfam07714, Pkinase_Tyr, Protein tyrosine kinase

 Score = 70.6 bits (174), Expect = 3e-15
 Identities = 38/139 (27%), Positives = 58/139 (41%), Gaps = 35/139 (25%)

Query: 41  KIGEGGFGSVYKGRL-----EDGTVVAVNVLSVESKQGE-TEFMSEVASMANINICHENL 94
           K+GEG FG VYKG L        T VAV  L   + + E  EF+ E + M  ++  H N+
Sbjct: 6   KLGEGAFGEVYKGTLKGDGEGTETKVAVKTLKEGASEEEREEFLEEASIMKKLS--HPNI 63

Query: 95  VKLHGGCIDGPSRILAPLQASIEALFLFTKLWKMDKFISIYVVSGS-----KKNRVKFNW 149
           V+L G C  G    +                      ++ Y+  G      +K+  K   
Sbjct: 64  VRLLGVCTQGEPLYI----------------------VTEYMPGGDLLDFLRKHGEKLTL 101

Query: 150 IARREIALGIARGLAYIHE 168
               ++AL IA+G+ Y+  
Sbjct: 102 KDLLQMALQIAKGMEYLES 120

Length = 258

>gnl|CDD|214568 smart00221, STYKc, Protein kinase; unclassified specificity

 Score = 70.3 bits (173), Expect = 5e-15
 Identities = 41/140 (29%), Positives = 58/140 (41%), Gaps = 36/140 (25%)

Query: 41  KIGEGGFGSVYKGRLEDG-----TVVAVNVLSVE-SKQGETEFMSEVASMANINICHENL 94
           K+GEG FG VYKG L+         VAV  L  + S+Q   EF+ E   M  ++  H N+
Sbjct: 6   KLGEGAFGEVYKGTLKGKGDGKEVEVAVKTLKEDASEQQIEEFLREARIMRKLD--HPNI 63

Query: 95  VKLHGGCIDGPSRILAPLQASIEALFLFTKLWKMDKFISIYVVSGS-----KKNRVKF-N 148
           VKL G C +    ++                      +  Y+  G      +KNR K  +
Sbjct: 64  VKLLGVCTEEEPLMI----------------------VMEYMPGGDLLDYLRKNRPKELS 101

Query: 149 WIARREIALGIARGLAYIHE 168
                  AL IARG+ Y+  
Sbjct: 102 LSDLLSFALQIARGMEYLES 121

Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase. Length = 258

>gnl|CDD|173623 cd00180, PKc, Catalytic domain of Protein Kinases

 Score = 64.6 bits (158), Expect = 3e-13
 Identities = 38/135 (28%), Positives = 54/135 (40%), Gaps = 31/135 (22%)

Query: 42  IGEGGFGSVYKGR-LEDGTVVAVNVLSVESKQGETE-FMSEVASMANINICHENLVKLHG 99
           +GEGGFG+VY  R  + G  VA+ ++  E      E  + E+  +  +N  H N+VKL+G
Sbjct: 1   LGEGGFGTVYLARDKKTGKKVAIKIIKKEDSSSLLEELLREIEILKKLN--HPNIVKLYG 58

Query: 100 GCIDGPSRILAPLQASIEALFLFTKLWKMDKFISIYVVSGS-----KKNRVKFNWIARRE 154
              D     L                  M+     Y   GS     K+N  K +      
Sbjct: 59  VFEDENHLYLV-----------------ME-----YCEGGSLKDLLKENEGKLSEDEILR 96

Query: 155 IALGIARGLAYIHEE 169
           I L I  GL Y+H  
Sbjct: 97  ILLQILEGLEYLHSN 111

Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which one kinase activates a second kinase, which in turn, may act on other kinases; this sequential action transmits a signal from the cell surface to target proteins, which results in cellular responses. The PK family is one of the largest known protein families with more than 100 homologous yeast enzymes and 550 human proteins. A fraction of PK family members are pseudokinases that lack crucial residues for catalytic activity. The mutiplicity of kinases allows for specific regulation according to substrate, tissue distribution, and cellular localization. PKs regulate many cellular processes including proliferation, division, differentiation, motility, survival, metabolism, cell-cycle progression, cytoskeletal rearrangement, immunity, and neuronal functions. Many kinases are implicated in the development of various human diseases including different types of cancer. Length = 215

>gnl|CDD|173624 cd00192, PTKc, Catalytic domain of Protein Tyrosine Kinases

 Score = 64.1 bits (157), Expect = 8e-13
 Identities = 35/136 (25%), Positives = 60/136 (44%), Gaps = 20/136 (14%)

Query: 40  NKIGEGGFGSVYKGRLEDG----TVVAVNVL-SVESKQGETEFMSEVASMANINICHENL 94
            K+GEG FG VYKG+L+      T VAV  L    S++   +F+ E   M  +   H N+
Sbjct: 1   KKLGEGAFGEVYKGKLKGKDGKTTEVAVKTLKEDASEEERKDFLKEARVMKKLG--HPNV 58

Query: 95  VKLHGGCIDGPSRILAPLQASIEALFLFTKLWKMDKFI--SIYVVSGSKKNRVKFNWIAR 152
           V+L G C +     L         +  + +   +  ++  S  V    +K+ +    +  
Sbjct: 59  VRLLGVCTEEEPLYL---------VLEYMEGGDLLDYLRKSRPVFPSPEKSTLSLKDLLS 109

Query: 153 REIALGIARGLAYIHE 168
              A+ IA+G+ Y+  
Sbjct: 110 --FAIQIAKGMEYLAS 123

Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain, leading to intracellular signaling. Some RTKs are orphan receptors with no known ligands. Non-receptor (or cytoplasmic) tyr kinases are distributed in different intracellular compartments and are usually multi-domain proteins containing a catalytic tyr kinase domain as well as various regulatory domains such as SH3 and SH2. PTKs are usually autoinhibited and require a mechanism for activation. In many PTKs, the phosphorylation of tyr residues in the activation loop is essential for optimal activity. Aberrant expression of PTKs is associated with many development abnormalities and cancers. Length = 262

>gnl|CDD|215690 pfam00069, Pkinase, Protein kinase domain

 Score = 58.0 bits (141), Expect = 1e-10
 Identities = 34/137 (24%), Positives = 53/137 (38%), Gaps = 23/137 (16%)

Query: 36  FRTSNKIGEGGFGSVYKGR-LEDGTVVAVNVLSVES--KQGETEFMSEVASMANINICHE 92
           +    K+G G FG+VYK +    G +VAV +L   S   + +     E+  +  ++  H 
Sbjct: 1   YELLRKLGSGSFGTVYKAKHKGTGKIVAVKILKKRSEKSKKDQTARREIRILRRLS--HP 58

Query: 93  NLVKLHGGCIDGPSRILAPLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIAR 152
           N+V+L     D     L  +    E   LF  L                      +    
Sbjct: 59  NIVRLIDAFEDKDHLYL--VMEYCEGGDLFDYL----------------SRGGPLSEDEA 100

Query: 153 REIALGIARGLAYIHEE 169
           ++IAL I RGL Y+H  
Sbjct: 101 KKIALQILRGLEYLHSN 117

Length = 260

>gnl|CDD|173731 cd06627, STKc_Cdc7_like, Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases

 Score = 57.3 bits (139), Expect = 2e-10
 Identities = 41/144 (28%), Positives = 62/144 (43%), Gaps = 37/144 (25%)

Query: 36  FRTSNKIGEGGFGSVYKG-RLEDGTVVAVNVLSVESKQGE--TEFMSEVASMANINICHE 92
           ++  + IG G FG VYKG  LE G  VA+  +S+E  + E     M E+  + N+   H 
Sbjct: 2   YQLGDLIGRGAFGVVYKGLNLETGDFVAIKQISLEKIKEEALKSIMQEIDLLKNLK--HP 59

Query: 93  NLVKLHGGCIDGPSRILAPLQASIEALFLFTKLWKMDKFISI---YVVSGSKKNRVK-FN 148
           N+VK  G               SIE              + I   Y  +GS +  +K F 
Sbjct: 60  NIVKYIG---------------SIET----------SDSLYIILEYAENGSLRQIIKKFG 94

Query: 149 WIARREIALGIA---RGLAYIHEE 169
                 +A+ +    +GLAY+HE+
Sbjct: 95  PFPESLVAVYVYQVLQGLAYLHEQ 118

Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast Cdc7 is essential for cell division by playing a key role in the initiation of septum formation and cytokinesis. Budding yeast Cdc15 functions to coordinate mitotic exit with cytokinesis. Arabidopsis MAPKKK epsilon is required for pollen development in the plasma membrane. Length = 254

>gnl|CDD|173659 cd05122, PKc_STE, Catalytic domain of STE family Protein Kinases

 Score = 54.9 bits (133), Expect = 1e-09
 Identities = 36/138 (26%), Positives = 61/138 (44%), Gaps = 26/138 (18%)

Query: 36  FRTSNKIGEGGFGSVYKGR-LEDGTVVAVNVLSVESKQGETEFMSEVASMANINICHENL 94
           F    KIG+GGFG VYK R    G  VA+ V+ +ESK+ + + ++E+  +      H N+
Sbjct: 2   FEILEKIGKGGFGEVYKARHKRTGKEVAIKVIKLESKEKKEKIINEIQILKKCK--HPNI 59

Query: 95  VKLHGGCIDGPSRILAPLQASIEALFLFTKLWKMDKFI---SIYVVSGSKKNRVKFNWIA 151
           VK +G  +                     +LW + +F    S+  +  S    +  + IA
Sbjct: 60  VKYYGSYLKK------------------DELWIVMEFCSGGSLKDLLKSTNQTLTESQIA 101

Query: 152 RREIALGIARGLAYIHEE 169
              +   + +GL Y+H  
Sbjct: 102 Y--VCKELLKGLEYLHSN 117

Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and activated by a MAPKK, which itself is phosphorylated and activated by a MAPKKK. Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAPKKK to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. Other STE family members include p21-activated kinases (PAKs) and class III myosins, among others. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain, which can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, as well as autophosphorylate the C-terminal motor domain. They play an important role in maintaining the structural integrity of photoreceptor cell microvilli. Length = 253

>gnl|CDD|173628 cd05038, PTKc_Jak_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases

 Score = 54.3 bits (131), Expect = 3e-09
 Identities = 35/141 (24%), Positives = 57/141 (40%), Gaps = 33/141 (23%)

Query: 39  SNKIGEGGFGSVYKGRLE---DGT--VVAVNVLSVES-KQGETEFMSEVASMANINICHE 92
             ++GEG FG V   R +   D T   VAV  L+    +Q  ++F  E+  +  ++  HE
Sbjct: 9   IKQLGEGHFGKVELCRYDPLGDNTGEQVAVKSLNHSGEEQHRSDFEREIEILRTLD--HE 66

Query: 93  NLVKLHGGCIDGPSRILAPLQASIEALFLFTKLWKMDKFISIYVVSGS-----KKNRVKF 147
           N+VK  G C     R L                    + I  Y+ SGS     +++R + 
Sbjct: 67  NIVKYKGVCEKPGGRSL--------------------RLIMEYLPSGSLRDYLQRHRDQI 106

Query: 148 NWIARREIALGIARGLAYIHE 168
           N       +  I +G+ Y+  
Sbjct: 107 NLKRLLLFSSQICKGMDYLGS 127

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jaks are also involved in regulating the surface expression of some cytokine receptors. The Jak-STAT pathway is involved in many biological processes including hematopoiesis, immunoregulation, host defense, fertility, lactation, growth, and embryogenesis. Length = 284

>gnl|CDD|133180 cd05049, PTKc_Trk, Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases

 Score = 54.0 bits (130), Expect = 3e-09
 Identities = 25/75 (33%), Positives = 34/75 (45%), Gaps = 9/75 (12%)

Query: 42  IGEGGFGSVYKGRL------EDGTVVAVNVLS-VESKQGETEFMSEVASMANINICHENL 94
           +GEG FG V+ G         D  +VAV  L    S     +F  E   + N    HEN+
Sbjct: 13  LGEGAFGKVFLGECYHLEPENDKELVAVKTLKETASNDARKDFEREAELLTNFQ--HENI 70

Query: 95  VKLHGGCIDGPSRIL 109
           VK +G C +G   I+
Sbjct: 71  VKFYGVCTEGDPPIM 85

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalytic domain. Trk receptors are mainly expressed in the peripheral and central nervous systems. They play important roles in cell fate determination, neuronal survival and differentiation, as well as in the regulation of synaptic plasticity. Altered expression of Trk receptors is associated with many human diseases. Length = 280

>gnl|CDD|214567 smart00220, S_TKc, Serine/Threonine protein kinases, catalytic domain

 Score = 53.7 bits (130), Expect = 4e-09
 Identities = 32/141 (22%), Positives = 54/141 (38%), Gaps = 34/141 (24%)

Query: 36  FRTSNKIGEGGFGSVYKGR-LEDGTVVAVNVLSVESKQGETE-FMSEVASMANINICHEN 93
           +    K+GEG FG VY  R  + G +VA+ V+  +  + + E  + E+  +  +   H N
Sbjct: 1   YEILEKLGEGSFGKVYLARDKKTGKLVAIKVIKKKKIKKDRERILREIKILKKLK--HPN 58

Query: 94  LVKLHGGCIDGPSRILAPLQASIEALFLFTKLWKMDKFISIYVVSGS------KKNRVKF 147
           +V+L+    D               L+L      M+     Y   G       K+ R+  
Sbjct: 59  IVRLYDVFEDEDK------------LYLV-----ME-----YCEGGDLFDLLKKRGRLSE 96

Query: 148 NWIARREIALGIARGLAYIHE 168
           +    R     I   L Y+H 
Sbjct: 97  DEA--RFYLRQILSALEYLHS 115

Phosphotransferases. Serine or threonine-specific kinase subfamily. Length = 254

>gnl|CDD|133248 cd05148, PTKc_Srm_Brk, Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk

 Score = 52.8 bits (127), Expect = 7e-09
 Identities = 22/78 (28%), Positives = 39/78 (50%), Gaps = 3/78 (3%)

Query: 36  FRTSNKIGEGGFGSVYKGRLEDGTVVAVNVLSVESKQGETEFMSEVASMANINICHENLV 95
           F    K+G G FG V++G  ++   VA+ +L  +    + +F  EV ++  +   H++L+
Sbjct: 8   FTLERKLGSGYFGEVWEGLWKNRVRVAIKILKSDDLLKQQDFQKEVQALKRLR--HKHLI 65

Query: 96  KLHGGCIDG-PSRILAPL 112
            L   C  G P  I+  L
Sbjct: 66  SLFAVCSVGEPVYIITEL 83

Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Srm and Brk however, lack the N-terminal myristylation sites. Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Brk has been found to be overexpressed in a majority of breast tumors. Length = 261

>gnl|CDD|133181 cd05050, PTKc_Musk, Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase

 Score = 50.6 bits (121), Expect = 6e-08
 Identities = 41/147 (27%), Positives = 61/147 (41%), Gaps = 31/147 (21%)

Query: 42  IGEGGFGSVYKGRL------EDGTVVAVNVLSVE-SKQGETEFMSEVASMANINICHENL 94
           IG+G FG V++ R       E  T+VAV +L  E S   + +F  E A MA  +  H N+
Sbjct: 13  IGQGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFD--HPNI 70

Query: 95  VKLHGGCIDGPSRILAPLQASIEALFLFTKLWKMDKFI-------------SIYVVSGSK 141
           VKL G C  G    L         LF +     +++F+             S        
Sbjct: 71  VKLLGVCAVGKPMCL---------LFEYMAYGDLNEFLRHRSPRAQCSLSHSTSSARKCG 121

Query: 142 KNRVKFNWIARREIALGIARGLAYIHE 168
            N +  +   +  IA  +A G+AY+ E
Sbjct: 122 LNPLPLSCTEQLCIAKQVAAGMAYLSE 148

Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates Musk autophosphorylation and activation, leading to the clustering of acetylcholine receptors (AChRs). To date, there is no evidence to suggest that agrin binds directly to Musk. Mutations in AChR, Musk and other partners are responsible for diseases of the NMJ, such as the autoimmune syndrome myasthenia gravis. Length = 288

>gnl|CDD|133172 cd05040, PTKc_Ack_like, Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase

 Score = 48.9 bits (117), Expect = 2e-07
 Identities = 32/101 (31%), Positives = 50/101 (49%), Gaps = 17/101 (16%)

Query: 41  KIGEGGFGSVYKGRLED--GTV--VAVNVLSVESKQG-ETEFMSEVASMANINICHENLV 95
           K+G+G FG V +G      G V  VAV  L  +       +F+ E A M +++  HENL+
Sbjct: 2   KLGDGSFGVVRRGEWSTSGGKVIPVAVKCLKSDKLSDIMDDFLKEAAIMHSLD--HENLI 59

Query: 96  KLHGGCIDGPSRI---LAPLQASIEAL-------FLFTKLW 126
           +L+G  +  P  +   LAPL + ++ L       FL + L 
Sbjct: 60  RLYGVVLTHPLMMVTELAPLGSLLDRLRKDALGHFLISTLC 100

Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with androgen-independent prostate cancer progression. Tnk1 regulates TNFalpha signaling and may play an important role in cell death. Length = 257

>gnl|CDD|133191 cd05060, PTKc_Syk_like, Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases

 Score = 47.7 bits (114), Expect = 4e-07
 Identities = 39/138 (28%), Positives = 60/138 (43%), Gaps = 34/138 (24%)

Query: 40  NKIGEGGFGSVYKG--RLEDGTV--VAVNVLSVE-SKQGETEFMSEVASMANINICHENL 94
            ++G G FGSV KG   ++ G    VAV  L  E    G+ EF+ E + MA ++  H  +
Sbjct: 1   KELGHGNFGSVVKGVYLMKSGKEVEVAVKTLKQEHIAAGKKEFLREASVMAQLD--HPCI 58

Query: 95  VKLHGGCIDGPSRIL----APLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWI 150
           V+L G C  G   +L    APL               + K++         K R +    
Sbjct: 59  VRLIGVCK-GEPLMLVMELAPLGP-------------LLKYL---------KKRREIPVS 95

Query: 151 ARREIALGIARGLAYIHE 168
             +E+A  +A G+AY+  
Sbjct: 96  DLKELAHQVAMGMAYLES 113

Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, migration, and phagocytosis. Syk is important in B-cell receptor (BCR) signaling, while Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Syk also plays a central role in Fc receptor-mediated phagocytosis in the adaptive immune system. Shark is exclusively expressed in ectodermally derived epithelia, and is localized preferentially to the apical surface of the epithelial cells, it may play a role in a signaling pathway for epithelial cell polarity. Length = 257

>gnl|CDD|133167 cd05035, PTKc_Axl_like, Catalytic Domain of Axl-like Protein Tyrosine Kinases

 Score = 47.5 bits (113), Expect = 6e-07
 Identities = 29/79 (36%), Positives = 46/79 (58%), Gaps = 10/79 (12%)

Query: 42  IGEGGFGSVYKGRL--EDGTVVAVNVLSVE---SKQGETE-FMSEVASMANINICHENLV 95
           +GEG FGSV +G+L  +DG+ + V V +++       E E F+SE A M + +  H N++
Sbjct: 7   LGEGEFGSVMEGQLSQDDGSQLKVAVKTMKLDIHTYSEIEEFLSEAACMKDFD--HPNVM 64

Query: 96  KLHGGCIDGPS--RILAPL 112
           KL G C +  S  +I  P+
Sbjct: 65  KLIGVCFEASSLQKIPKPM 83

Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellular effects including survival, proliferation, migration, and phagocytosis. They are also associated with several types of cancer as well as inflammatory, autoimmune, vascular, and kidney diseases. Mer is named after its original reported expression pattern (monocytes, epithelial, and reproductive tissues). It is required for the ingestion of apoptotic cells by phagocytes such as macrophages, retinal pigment epithelial cells, and dendritic cells. Mer is also important in maintaining immune homeostasis. Length = 273

>gnl|CDD|133187 cd05056, PTKc_FAK, Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase

 Score = 47.0 bits (112), Expect = 8e-07
 Identities = 28/80 (35%), Positives = 37/80 (46%), Gaps = 10/80 (12%)

Query: 41  KIGEGGFGSVYKG---RLEDGTV-VAVNVLSVESKQGETE-FMSEVASMANINICHENLV 95
            IGEG FG VY+G     E+  + VAV      +     E F+ E   M   +  H ++V
Sbjct: 13  CIGEGQFGDVYQGVYMSPENEKIAVAVKTCKNCTSPSVREKFLQEAYIMRQFD--HPHIV 70

Query: 96  KLHGGCIDGPSRI---LAPL 112
           KL G   + P  I   LAPL
Sbjct: 71  KLIGVITENPVWIVMELAPL 90

Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions and at growth factor receptors. Through diverse molecular interactions, FAK functions as a biosensor or integrator to control cell motility. It is a key regulator of cell survival, proliferation, migration and invasion, and thus plays an important role in the development and progression of cancer. Src binds to autophosphorylated FAK forming the FAK-Src dual kinase complex, which is activated in a wide variety of tumor cells and generates signals promoting growth and metastasis. FAK is being developed as a target for cancer therapy. Length = 270

>gnl|CDD|173629 cd05041, PTKc_Fes_like, Catalytic domain of Fes-like Protein Tyrosine Kinases

 Score = 46.3 bits (110), Expect = 1e-06
 Identities = 24/64 (37%), Positives = 31/64 (48%), Gaps = 3/64 (4%)

Query: 41  KIGEGGFGSVYKGRLEDGTVVAVNVLSVESKQGETE-FMSEVASMANINICHENLVKLHG 99
           KIG+G FG VYKG L+  T VAV              F+ E   +   +  H N+VKL G
Sbjct: 2   KIGKGNFGDVYKGVLKGNTEVAVKTCRSTLPPDLKRKFLQEAEILKQYD--HPNIVKLIG 59

Query: 100 GCID 103
            C+ 
Sbjct: 60  VCVQ 63

Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes and Fer kinases play roles in haematopoiesis, inflammation and immunity, growth factor signaling, cytoskeletal regulation, cell migration and adhesion, and the regulation of cell-cell interactions. Fes and Fer show redundancy in their biological functions. Length = 251

>gnl|CDD|173725 cd06608, STKc_myosinIII_like, Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases

 Score = 45.0 bits (107), Expect = 4e-06
 Identities = 39/143 (27%), Positives = 53/143 (37%), Gaps = 41/143 (28%)

Query: 42  IGEGGFGSVYKGR-LEDGTVVAVNVLSVESKQGETEFMSEVASMANINIC-----HENLV 95
           IGEG +G VYK R  + G +VA+ ++ +   + E E   E       NI      H N+ 
Sbjct: 14  IGEGTYGKVYKARHKKTGQLVAIKIMDIIEDE-EEEIKEE------YNILRKYSNHPNIA 66

Query: 96  KLHGGCIDGPSRILAPLQASIEALFLFTKLWKMDKFISIYVVSGS----------KKNRV 145
             +G  I                     +LW     +      GS          K  R+
Sbjct: 67  TFYGAFIKKNPPGNDD------------QLW----LVMELCGGGSVTDLVKGLRKKGKRL 110

Query: 146 KFNWIARREIALGIARGLAYIHE 168
           K  WIA   I     RGLAY+HE
Sbjct: 111 KEEWIAY--ILRETLRGLAYLHE 131

Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin III may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. It may also function as a cargo carrier during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. The Drosophila class III myosin, called NinaC (Neither inactivation nor afterpotential protein C), is critical in normal adaptation and termination of photoresponse. Vertebrates contain two isoforms of class III myosin, IIIA and IIIB. This subfamily also includes mammalian NIK-like embryo-specific kinase (NESK), Traf2- and Nck-interacting kinase (TNIK), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6). MAP4Ks are involved in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Length = 275

>gnl|CDD|173727 cd06613, STKc_MAP4K3_like, Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases

 Score = 44.2 bits (105), Expect = 7e-06
 Identities = 18/61 (29%), Positives = 29/61 (47%), Gaps = 3/61 (4%)

Query: 40 NKIGEGGFGSVYKGR-LEDGTVVAVNVLSVESKQGETEFMSEVASMANINICHENLVKLH 98
           +IG G +G VYK R +  G +VA+ V+ +E          E++ +      H N+V   
Sbjct: 9  QRIGSGTYGDVYKARDIATGELVAIKVIKLEPGDDFEIIQQEISMLKECR--HPNIVAYF 66

Query: 99 G 99
          G
Sbjct: 67 G 67

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAP4K1, also called haematopoietic progenitor kinase 1 (HPK1), is a hematopoietic-specific STK involved in many cellular signaling cascades including MAPK, antigen receptor, apoptosis, growth factor, and cytokine signaling. It participates in the regulation of T cell receptor signaling and T cell-mediated immune responses. MAP4K2 was referred to as germinal center (GC) kinase because of its preferred location in GC B cells. MAP4K3 plays a role in the nutrient-responsive pathway of mTOR (mammalian target of rapamycin) signaling. It is required in the activation of S6 kinase by amino acids and for the phosphorylation of the mTOR-regulated inhibitor of eukaryotic initiation factor 4E. MAP4K5, also called germinal center kinase-related enzyme (GCKR), has been shown to activate the MAPK c-Jun N-terminal kinase (JNK). Length = 262

>gnl|CDD|132957 cd06626, STKc_MEKK4, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4

 Score = 43.5 bits (103), Expect = 1e-05
 Identities = 22/64 (34%), Positives = 33/64 (51%), Gaps = 5/64 (7%)

Query: 39 SNKIGEGGFGSVYKG-RLEDGTVVAVNVLSVESKQGET--EFMSEVASMANINICHENLV 95
           NKIG G FG VY    L+ G ++AV  + ++    +T  E   E+  +  +   H NLV
Sbjct: 5  GNKIGGGTFGKVYTAVNLDTGELMAVKEIRIQDNDPKTIKEIADEMKVLELLK--HPNLV 62

Query: 96 KLHG 99
          K +G
Sbjct: 63 KYYG 66

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4/MKK7 and MKK3/MKK6. JNK and p38 are collectively known as stress-activated MAPKs, as they are activated in response to a variety of environmental stresses and pro-inflammatory cytokines. MEKK4 also plays roles in the re-polarization of the actin cytoskeleton in response to osmotic stress, in the proper closure of the neural tube, in cardiovascular development, and in immune responses. Length = 264

>gnl|CDD|173630 cd05044, PTKc_c-ros, Catalytic domain of the Protein Tyrosine Kinase, C-ros

 Score = 43.3 bits (102), Expect = 2e-05
 Identities = 27/70 (38%), Positives = 35/70 (50%), Gaps = 10/70 (14%)

Query: 42  IGEGGFGSVYKGRLED----GT---VVAVNVLSVESKQGE-TEFMSEVASMANINICHEN 93
           +G G FG VY+G   D    G+    VAV  L   +   E  EF+ E   M+N N  H N
Sbjct: 3   LGSGAFGEVYEGTATDILGPGSGPIRVAVKTLRKGATDQEKKEFLKEAHLMSNFN--HPN 60

Query: 94  LVKLHGGCID 103
           +VKL G C+ 
Sbjct: 61  IVKLLGVCLL 70

Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male mice bearing inactive mutations of c-ros lack the initial segment of the epididymis and are infertile. The Drosophila protein, Sevenless, is required for the specification of the R7 photoreceptor cell during eye development. Length = 269

>gnl|CDD|173739 cd07838, STKc_CDK4_6_like, Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases

 Score = 43.0 bits (102), Expect = 2e-05
 Identities = 22/66 (33%), Positives = 35/66 (53%), Gaps = 4/66 (6%)

Query: 36 FRTSNKIGEGGFGSVYKGR-LEDGTVVAVNVLSVE-SKQGETEFM-SEVASMANINIC-H 91
          +    +IGEG +G+VYK R L  G  VA+  + V  S++G       E+A +  +    H
Sbjct: 1  YEELAEIGEGAYGTVYKARDLNTGRFVALKKVRVPLSEEGIPLSTLREIALLKQLESFEH 60

Query: 92 ENLVKL 97
           N+V+L
Sbjct: 61 PNIVRL 66

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both expressed ubiquitously, associate with all three D cyclins (D1, D2 and D3), and phosphorylate the retinoblastoma (pRb) protein. They are also regulated by the INK4 family of inhibitors which associate with either the CDK alone or the CDK/cyclin complex. CDK4 and CDK6 show differences in subcellular localization, sensitivity to some inhibitors, timing in activation, tumor selectivity, and possibly substrate profiles. Although CDK4 and CDK6 seem to show some redundancy, they also have discrete, nonoverlapping functions. CDK6 plays an important role in cell differentiation. Length = 287

>gnl|CDD|143345 cd07840, STKc_CDK9_like, Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases

 Score = 42.9 bits (102), Expect = 2e-05
 Identities = 19/64 (29%), Positives = 33/64 (51%), Gaps = 9/64 (14%)

Query: 40 NKIGEGGFGSVYKGR-LEDGTVVAVNVLSVESKQGETEFMSEVASMANINIC----HENL 94
           +IGEG +G VYK R  + G +VA+  + +E    +  F   + ++  I +     H N+
Sbjct: 5  AQIGEGTYGQVYKARNKKTGELVALKKIRME--NEKEGF--PITAIREIKLLQKLRHPNI 60

Query: 95 VKLH 98
          V+L 
Sbjct: 61 VRLK 64

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA polymerase II and participate in regulating mutliple steps of gene expression including transcription elongation and RNA processing. CDK9 and CdkC associate with T-type cyclins while BUR1 associates with the cyclin BUR2. CDK12 is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 interacts with cyclins L1 and L2, and participates in regulating transcription and alternative splicing. Length = 287

>gnl|CDD|173649 cd05093, PTKc_TrkB, Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B

 Score = 43.1 bits (101), Expect = 2e-05
 Identities = 34/139 (24%), Positives = 59/139 (42%), Gaps = 21/139 (15%)

Query: 41  KIGEGGFGSVYKGRL------EDGTVVAVNVLSVESKQGETEFMSEVASMANINICHENL 94
           ++GEG FG V+          +D  +VAV  L   S     +F  E   + N+   HE++
Sbjct: 12  ELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQ--HEHI 69

Query: 95  VKLHGGCIDGPSRILAPLQASIEALFLFTKLWKMDKFISIY----VVSGSKKNRVKFNWI 150
           VK +G C++G   I+         +F + K   ++KF+  +    V+        +    
Sbjct: 70  VKFYGVCVEGDPLIM---------VFEYMKHGDLNKFLRAHGPDAVLMAEGNRPAELTQS 120

Query: 151 ARREIALGIARGLAYIHEE 169
               IA  IA G+ Y+  +
Sbjct: 121 QMLHIAQQIAAGMVYLASQ 139

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly expressed in the nervous system and in some non-neural tissues. It plays important roles in cell proliferation, differentiation, and survival. BDNF/Trk signaling plays a key role in regulating activity-dependent synaptic plasticity. TrkB also contributes to protection against gp120-induced neuronal cell death. TrkB overexpression is associated with poor prognosis in neuroblastoma (NB) and other human cancers. It acts as a suppressor of anoikis (detachment-induced apoptosis) and contributes to tumor metastasis. Length = 288

>gnl|CDD|133168 cd05036, PTKc_ALK_LTK, Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase

 Score = 42.4 bits (100), Expect = 3e-05
 Identities = 28/83 (33%), Positives = 41/83 (49%), Gaps = 10/83 (12%)

Query: 40  NKIGEGGFGSVYKG----RLEDGTVVAVNVLS---VESKQGETEFMSEVASMANINICHE 92
             +G G FG VY+G    R  D   + V V +     S+Q E++F+ E   M+  N  H+
Sbjct: 12  RALGHGAFGEVYEGLYRGRDGDAVELQVAVKTLPESCSEQDESDFLMEALIMSKFN--HQ 69

Query: 93  NLVKLHGGCIDG-PSRILAPLQA 114
           N+V+L G   +  P  IL  L A
Sbjct: 70  NIVRLIGVSFERLPRFILLELMA 92

Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well as visceral muscle differentiation in Drosophila. ALK is aberrantly expressed as fusion proteins, due to chromosomal translocations, in about 60% of anaplastic large cell lymphomas (ALCLs). ALK fusion proteins are also found in rare cases of diffuse large B cell lymphomas (DLBCLs). LTK is mainly expressed in B lymphocytes and neuronal tissues. It is important in cell proliferation and survival. Transgenic mice expressing TLK display retarded growth and high mortality rate. In addition, a polymorphism in mouse and human LTK is implicated in the pathogenesis of systemic lupus erythematosus. Length = 277

>gnl|CDD|132991 cd06917, STKc_NAK1_like, Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases

 Score = 42.4 bits (100), Expect = 3e-05
 Identities = 35/140 (25%), Positives = 64/140 (45%), Gaps = 32/140 (22%)

Query: 36  FRTSNKIGEGGFGSVYKGR-LEDGTVVAVNVLSVESKQGE-TEFMSEVASMANINICH-E 92
           ++    IG G +G+VY+G+ +  G VVA+ ++++++   + ++   EVA ++ +      
Sbjct: 3   YQRLELIGRGAYGAVYRGKHVPTGRVVALKIINLDTPDDDVSDIQREVALLSQLRQSQPP 62

Query: 93  NLVKLHGGCIDGPSRILAPLQASIEALFLFTKLW-KMDKFISIYVVSGSKKNRVKFNWIA 151
           N+ K +G  + GP                   LW  M+     Y   GS +  +K   IA
Sbjct: 63  NITKYYGSYLKGPR------------------LWIIME-----YAEGGSVRTLMKAGPIA 99

Query: 152 RREIALGIAR----GLAYIH 167
            + I++ I R     L YIH
Sbjct: 100 EKYISV-IIREVLVALKYIH 118

Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of centrin, and phosphorylates substrates in a Cdc31p-dependent manner. Length = 277

>gnl|CDD|173772 cd08530, STKc_CNK2-like, Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains

 Score = 42.0 bits (99), Expect = 4e-05
 Identities = 36/138 (26%), Positives = 59/138 (42%), Gaps = 21/138 (15%)

Query: 35  GFRTSNKIGEGGFGSVYK-GRLEDGTVVA---VNVLSVESKQGETEFMSEVASMANINIC 90
            F+   K+G+G +GSVYK  RL D    A   V++ S+  K+ E + ++E+  +A++N  
Sbjct: 1   DFKVLKKLGKGSYGSVYKVKRLSDNQFYALKEVDLGSMSQKERE-DAVNEIRILASVN-- 57

Query: 91  HENLVKLHGGCIDGPSRILAPLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWI 150
           H N++      +DG    +    A    L                 +S  KK R      
Sbjct: 58  HPNIISYKEAFLDGNKLCIVMEYAPFGDL--------------SKAISKRKKKRKLIPEQ 103

Query: 151 ARREIALGIARGLAYIHE 168
               I + + RGL  +HE
Sbjct: 104 EIWRIFIQLLRGLQALHE 121

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, and it regulates cell size, through influencing the size threshold at which cells commit to mitosis. Length = 256

>gnl|CDD|173736 cd07832, STKc_CCRK, Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase

 Score = 42.3 bits (100), Expect = 4e-05
 Identities = 19/70 (27%), Positives = 33/70 (47%), Gaps = 10/70 (14%)

Query: 41  KIGEGGFGSVYKGR-LEDGTVVAVNVLSVESKQG--ETEFMSEVASMANINICHENLVKL 97
           +IGEG  G V+K +  E G  VA+  +++   +G    + + E+ ++      H  +VKL
Sbjct: 7   RIGEGAHGIVFKAKDRETGETVALKKVALRRLEGGIPNQALREIKALQACQ--HPYVVKL 64

Query: 98  -----HGGCI 102
                HG   
Sbjct: 65  LDVFPHGSGF 74

Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of heart failure. Length = 286

>gnl|CDD|132963 cd06632, STKc_MEKK1_plant, Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1

 Score = 42.0 bits (99), Expect = 5e-05
 Identities = 33/132 (25%), Positives = 56/132 (42%), Gaps = 26/132 (19%)

Query: 42  IGEGGFGSVYKG-RLEDGTVVAVNVLSV-----ESKQGETEFMSEVASMANINICHENLV 95
           +G G FGSVY+G  L+DG   AV  +S+       ++   +   E+A ++   + H N+V
Sbjct: 8   LGSGSFGSVYEGLNLDDGDFFAVKEVSLADDGQTGQEAVKQLEQEIALLS--KLQHPNIV 65

Query: 96  KLHGGCIDGPSRILAPLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREI 155
           +  G   +             + L++F +L        +    GS    V   +   R+I
Sbjct: 66  QYLGTEREE------------DNLYIFLELVPGGSLAKLLKKYGSFPEPVIRLYT--RQI 111

Query: 156 ALGIARGLAYIH 167
            L    GL Y+H
Sbjct: 112 LL----GLEYLH 119

Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidopsis thaliana MEKK1 activates MPK4, a MAPK that regulates systemic acquired resistance. MEKK1 also participates in the regulation of temperature-sensitive and tissue-specific cell death. Length = 258

>gnl|CDD|173626 cd05034, PTKc_Src_like, Catalytic domain of Src kinase-like Protein Tyrosine Kinases

 Score = 41.9 bits (99), Expect = 5e-05
 Identities = 23/77 (29%), Positives = 32/77 (41%), Gaps = 9/77 (11%)

Query: 31  IATNGFRTSNKIGEGGFGSVYKGRLEDGTVVAVNVLSVESKQGE---TEFMSEVASMANI 87
           I     +   K+G G FG V+ G     T VAV  L    K G      F+ E   M  +
Sbjct: 3   IPRESLKLERKLGAGQFGEVWMGTWNGTTKVAVKTL----KPGTMSPEAFLQEAQIMKKL 58

Query: 88  NICHENLVKLHGGCIDG 104
              H+ LV+L+  C + 
Sbjct: 59  R--HDKLVQLYAVCSEE 73

Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. They were identified as the first proto-oncogene products, and they regulate cell adhesion, invasion, and motility in cancer cells and tumor vasculature, contributing to cancer progression and metastasis. Src kinases are overexpressed in a variety of human cancers, making them attractive targets for therapy. They are also implicated in acute inflammatory responses and osteoclast function. Src, Fyn, Yes, and Yrk are widely expressed, while Blk, Lck, Hck, Fgr, and Lyn show a limited expression pattern. Length = 261

>gnl|CDD|173734 cd07830, STKc_MAK_like, Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases

 Score = 41.8 bits (99), Expect = 6e-05
 Identities = 24/66 (36%), Positives = 37/66 (56%), Gaps = 5/66 (7%)

Query: 36 FRTSNKIGEGGFGSVYKGR-LEDGTVVAVNVLSVESKQGETEFMS--EVASMANINICHE 92
          ++   ++G+G FGSVY  R  E G +VA+  +  +    E E M+  EV S+  +N  H 
Sbjct: 1  YKVIKQLGDGTFGSVYLARNKETGELVAIKKMKKKFYSWE-ECMNLREVKSLRKLN-EHP 58

Query: 93 NLVKLH 98
          N+VKL 
Sbjct: 59 NIVKLK 64

Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertility. It functions as a coactivator of the androgen receptor in prostate cells. MRK, also called Intestinal Cell Kinase (ICK), is expressed ubiquitously, with highest expression in the ovary and uterus. A missense mutation in MRK causes endocrine-cerebro-osteodysplasia (ECO), suggesting that this protein plays an important role in the development of many organs. MAK and MRK may be involved in regulating cell cycle and cell fate. Ime2p is a meiosis-specific kinase that is important during meiotic initiation and during the later stages of meiosis. Mde3 functions downstream of the transcription factor Mei-4 which is essential for meiotic prophase I. Length = 283

>gnl|CDD|173650 cd05094, PTKc_TrkC, Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C

 Score = 41.9 bits (98), Expect = 6e-05
 Identities = 35/139 (25%), Positives = 62/139 (44%), Gaps = 24/139 (17%)

Query: 41  KIGEGGFGSVYKGR------LEDGTVVAVNVLSVESKQGETEFMSEVASMANINICHENL 94
           ++GEG FG V+          +D  +VAV  L   +     +F  E   + N+   HE++
Sbjct: 12  ELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQ--HEHI 69

Query: 95  VKLHGGCIDGPSRILAPLQASIEALFLFTKLWKMDKFI------SIYVVSGS-KKNRVKF 147
           VK +G C DG   I+         +F + K   ++KF+      ++ +V G  ++ + + 
Sbjct: 70  VKFYGVCGDGDPLIM---------VFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGEL 120

Query: 148 NWIARREIALGIARGLAYI 166
                  IA  IA G+ Y+
Sbjct: 121 GLSQMLHIASQIASGMVYL 139

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some non-neural tissues including the developing heart. NT3/TrkC signaling plays an important role in the innervation of the cardiac conducting system and the development of smooth muscle cells. Mice deficient with NT3 and TrkC have multiple heart defects. NT3/TrkC signaling is also critical for the development and maintenance of enteric neurons that are important for the control of gut peristalsis. Length = 291

>gnl|CDD|133171 cd05039, PTKc_Csk_like, Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases

 Score = 41.6 bits (98), Expect = 6e-05
 Identities = 23/63 (36%), Positives = 31/63 (49%), Gaps = 4/63 (6%)

Query: 42  IGEGGFGSVYKGRLEDGTVVAVNVLSVESKQGETEFMSEVASMANINICHENLVKLHGGC 101
           IG+G FG V  G    G  VAV  L  +S      F++E + M  +   H NLV+L G  
Sbjct: 14  IGKGEFGDVMLGDYR-GQKVAVKCLKDDSTAA-QAFLAEASVMTTLR--HPNLVQLLGVV 69

Query: 102 IDG 104
           + G
Sbjct: 70  LQG 72

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, resulting in their inactivation. Chk inhibit Src kinases using a noncatalytic mechanism by simply binding to them. As negative regulators of Src kinases, Csk and Chk play important roles in cell proliferation, survival, and differentiation, and consequently, in cancer development and progression. Length = 256

>gnl|CDD|173633 cd05052, PTKc_Abl, Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase

 Score = 41.4 bits (97), Expect = 7e-05
 Identities = 26/67 (38%), Positives = 36/67 (53%), Gaps = 4/67 (5%)

Query: 40  NKIGEGGFGSVYKGRLED-GTVVAVNVLSVESKQGETEFMSEVASMANINICHENLVKLH 98
           +K+G G +G VY+G  +     VAV  L  ++ + E EF+ E A M  I   H NLV+L 
Sbjct: 12  HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIK--HPNLVQLL 68

Query: 99  GGCIDGP 105
           G C   P
Sbjct: 69  GVCTREP 75

Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays a role in cell proliferation and survival. In response to DNA damage or oxidative stress, Abl is transported to the nucleus where it induces apoptosis. In chronic myelogenous leukemia (CML) patients, an aberrant translocation results in the replacement of the first exon of Abl with the BCR (breakpoint cluster region) gene. The resulting BCR-Abl fusion protein is constitutively active and associates into tetramers, resulting in a hyperactive kinase sending a continuous signal. This leads to uncontrolled proliferation, morphological transformation and anti-apoptotic effects. BCR-Abl is the target of selective inhibitors, such as imatinib (Gleevec), used in the treatment of CML. Abl2, also known as ARG (Abelson-related gene), is thought to play a cooperative role with Abl in the proper development of the nervous system. The Tel-ARG fusion protein, resulting from reciprocal translocation between chromosomes 1 and 12, is associated with acute myeloid leukemia (AML). The TEL gene is a frequent fusion partner of other tyr kinase oncogenes, including Tel/Abl, Tel/PDGFRbeta, and Tel/Jak2, found in patients with leukemia and myeloproliferative disorders. Length = 263

>gnl|CDD|173636 cd05057, PTKc_EGFR_like, Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases

 Score = 41.6 bits (98), Expect = 7e-05
 Identities = 24/67 (35%), Positives = 37/67 (55%), Gaps = 8/67 (11%)

Query: 42  IGEGGFGSVYKG--RLEDGTV---VAVNVLSVES-KQGETEFMSEVASMANINICHENLV 95
           +G G FG+VYKG    E   V   VA+ VL  E+  +   E + E   MA+++  H ++V
Sbjct: 15  LGSGAFGTVYKGVWIPEGEKVKIPVAIKVLREETSPKANKEILDEAYVMASVD--HPHVV 72

Query: 96  KLHGGCI 102
           +L G C+
Sbjct: 73  RLLGICL 79

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, resulting in the phosphorylation of tyr residues in the C-terminal tail, which serve as binding sites for downstream signaling molecules. Collectively, they can recognize a variety of ligands including EGF, TGFalpha, and neuregulins, among others. All four subfamily members can form homo- or heterodimers. HER3 contains an impaired kinase domain and depends on its heterodimerization partner for activation. EGFR subfamily members are involved in signaling pathways leading to a broad range of cellular responses including cell proliferation, differentiation, migration, growth inhibition, and apoptosis. Gain of function alterations, through their overexpression, deletions, or point mutations in their kinase domains, have been implicated in various cancers. These receptors are targets of many small molecule inhibitors and monoclonal antibodies used in cancer therapy. Length = 279

>gnl|CDD|133216 cd05085, PTKc_Fer, Catalytic domain of the Protein Tyrosine Kinase, Fer

 Score = 41.1 bits (96), Expect = 8e-05
 Identities = 24/61 (39%), Positives = 35/61 (57%), Gaps = 3/61 (4%)

Query: 42  IGEGGFGSVYKGRLEDGTVVAVNVLSVESKQG-ETEFMSEVASMANINICHENLVKLHGG 100
           +G+G FG V+KG L+D T VAV     +  Q  + +F+SE   +   +  H N+VKL G 
Sbjct: 3   LGKGNFGEVFKGTLKDKTPVAVKTCKEDLPQELKIKFLSEARILKQYD--HPNIVKLIGV 60

Query: 101 C 101
           C
Sbjct: 61  C 61

Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-cell interactions mediated by adherens junctions and focal adhesions. Fer kinase also regulates cell cycle progression in malignant cells. Length = 250

>gnl|CDD|133243 cd05112, PTKc_Itk, Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase

 Score = 41.5 bits (97), Expect = 8e-05
 Identities = 30/130 (23%), Positives = 55/130 (42%), Gaps = 20/130 (15%)

Query: 39  SNKIGEGGFGSVYKGRLEDGTVVAVNVLSVESKQGETEFMSEVASMANINICHENLVKLH 98
             +IG G FG V+ G   +   VA+  +  E    E +F+ E   M  + + H  LV+L+
Sbjct: 9   VQEIGSGQFGLVWLGYWLEKRKVAIKTIR-EGAMSEEDFIEEAQVM--MKLSHPKLVQLY 65

Query: 99  GGCIDGPSRILAPLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALG 158
           G C +         ++ I  +F F +   +  ++        +  R KF+      + L 
Sbjct: 66  GVCTE---------RSPICLVFEFMEHGCLSDYL--------RAQRGKFSQETLLGMCLD 108

Query: 159 IARGLAYIHE 168
           +  G+AY+  
Sbjct: 109 VCEGMAYLES 118

Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. In addition, Itk contains the Tec homology (TH) domain containing one proline-rich region and a zinc-binding region. Tec kinases are expressed mainly by haematopoietic cells. Itk is expressed in T-cells and mast cells, and is important in their development and differentiation. Of the three Tec kinases expressed in T-cells, Itk plays the predominant role in T-cell receptor (TCR) signaling. It is activated by phosphorylation upon TCR crosslinking and is involved in the pathway resulting in phospholipase C-gamma1 activation and actin polymerization. It also plays a role in the downstream signaling of the T-cell costimulatory receptor CD28, the T-cell surface receptor CD2, and the chemokine receptor CXCR4. In addition, Itk is crucial for the development of T-helper(Th)2 effector responses. Length = 256

>gnl|CDD|173724 cd06606, STKc_MAPKKK, Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase

 Score = 41.0 bits (97), Expect = 9e-05
 Identities = 18/67 (26%), Positives = 32/67 (47%), Gaps = 5/67 (7%)

Query: 40  NKIGEGGFGSVYKGRLED-GTVVAVNVLSVESKQGET--EFMSEVASMANINICHENLVK 96
             +G G FGSVY    +D G ++AV  + +     E       E+  ++++   H N+V+
Sbjct: 6   ELLGRGSFGSVYLALDKDTGELMAVKSVELSGDSEEELEALEREIRILSSLQ--HPNIVR 63

Query: 97  LHGGCID 103
            +G   D
Sbjct: 64  YYGSERD 70

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKKK5) and ASK2 (or MAPKKK6), MEKK1, MEKK2, MEKK3, MEKK4, as well as plant and fungal MAPKKKs. Also included in this subfamily are the cell division control proteins Schizosaccharomyces pombe Cdc7 and Saccharomyces cerevisiae Cdc15. Length = 260

>gnl|CDD|133199 cd05068, PTKc_Frk_like, Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases

 Score = 40.9 bits (96), Expect = 1e-04
 Identities = 19/64 (29%), Positives = 31/64 (48%), Gaps = 3/64 (4%)

Query: 41  KIGEGGFGSVYKGRLEDGTVVAVNVLSVESKQGETEFMSEVASMANINICHENLVKLHGG 100
           K+G G FG V++G   + T VAV  L   +     +F++E   M  +   H  L++L+  
Sbjct: 13  KLGAGQFGEVWEGLWNNTTPVAVKTLKPGTMD-PKDFLAEAQIMKKLR--HPKLIQLYAV 69

Query: 101 CIDG 104
           C   
Sbjct: 70  CTLE 73

Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Frk, also known as Rak, is specifically expressed in liver, lung, kidney, intestine, mammary glands, and the islets of Langerhans. Rodent homologs were previously referred to as GTK (gastrointestinal tyr kinase), BSK (beta-cell Src-like kinase), or IYK (intestinal tyr kinase). Studies in mice reveal that Frk is not essential for viability. It plays a role in the signaling that leads to cytokine-induced beta-cell death in Type I diabetes. It also regulates beta-cell number during embryogenesis and early in life. Length = 261

>gnl|CDD|132943 cd06612, STKc_MST1_2, Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2

 Score = 40.7 bits (96), Expect = 1e-04
 Identities = 23/65 (35%), Positives = 34/65 (52%), Gaps = 5/65 (7%)

Query: 36 FRTSNKIGEGGFGSVYKGR-LEDGTVVAVNVLSVESKQGETEFMSEVASMANINICHENL 94
          F    K+GEG +GSVYK    E G VVA+ V+ VE      E + E++ +   +     +
Sbjct: 5  FDILEKLGEGSYGSVYKAIHKETGQVVAIKVVPVEE--DLQEIIKEISILKQCD--SPYI 60

Query: 95 VKLHG 99
          VK +G
Sbjct: 61 VKYYG 65

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a MAPK kinase) and MEKK1 (a MAPK kinase kinase) by acting as a MAPK kinase kinase kinase (MAPKKKK). Activation of JNK by MST1 leads to caspase activation and apoptosis. MST1 has also been implicated in cell proliferation and differentiation. Krs1 may regulate cell growth arrest and apoptosis in response to cellular stress. Length = 256

>gnl|CDD|132940 cd06609, STKc_MST3_like, Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases

 Score = 41.1 bits (97), Expect = 1e-04
 Identities = 38/142 (26%), Positives = 56/142 (39%), Gaps = 31/142 (21%)

Query: 36  FRTSNKIGEGGFGSVYKGR-LEDGTVVAVNVLSVESKQGETEFMS-EVASMANINICH-E 92
           F     IG+G FG VYK        VVA+ V+ +E  + E E +  E+  ++    C   
Sbjct: 3   FTLLECIGKGSFGEVYKAIDKRTNQVVAIKVIDLEEAEDEIEDIQQEIQFLSQ---CRSP 59

Query: 93  NLVKLHGGCIDGPSRILAPLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIAR 152
            + K +G  + G                  +KLW     I  Y   GS  + +K   +  
Sbjct: 60  YITKYYGSFLKG------------------SKLW----IIMEYCGGGSCLDLLKPGKLDE 97

Query: 153 REIA---LGIARGLAYIHEEIK 171
             IA     +  GL Y+HEE K
Sbjct: 98  TYIAFILREVLLGLEYLHEEGK 119

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN) signaling pathway, and plays a role in cytokinesis. SPS1 plays a role in regulating proteins required for spore wall formation. MST4 plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. STK25 may play a role in the regulation of cell migration and polarization. Length = 274

>gnl|CDD|133165 cd05033, PTKc_EphR, Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases

 Score = 40.8 bits (96), Expect = 1e-04
 Identities = 34/133 (25%), Positives = 55/133 (41%), Gaps = 26/133 (19%)

Query: 42  IGEGGFGSVYKGRL----EDGTVVAVNVLSVESKQGE-TEFMSEVASMANINICHENLVK 96
           IG G FG V +GRL    +    VA+  L   S   +  +F++E + M   +  H N+++
Sbjct: 12  IGGGEFGEVCRGRLKLPGKKEIDVAIKTLKAGSSDKQRLDFLTEASIMGQFD--HPNIIR 69

Query: 97  LHGGCIDG-PSRILAPLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREI 155
           L G      P  I+     +            +DKF+        ++N  KF       +
Sbjct: 70  LEGVVTKSRPVMIITEYMEN----------GSLDKFL--------RENDGKFTVGQLVGM 111

Query: 156 ALGIARGLAYIHE 168
             GIA G+ Y+ E
Sbjct: 112 LRGIASGMKYLSE 124

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. This allows ephrin/EphR dimers to form, leading to the activation of the intracellular tyr kinase domain. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). The main effect of ephrin/EphR interaction is cell-cell repulsion or adhesion. Ephrin/EphR signaling is important in neural development and plasticity, cell morphogenesis and proliferation, cell-fate determination, embryonic development, tissue patterning, and angiogenesis. Length = 266

>gnl|CDD|173625 cd05032, PTKc_InsR_like, Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases

 Score = 40.4 bits (95), Expect = 2e-04
 Identities = 22/70 (31%), Positives = 36/70 (51%), Gaps = 9/70 (12%)

Query: 42  IGEGGFGSVYKG---RLEDGTV---VAVNVLSVESKQGE-TEFMSEVASMANINICHENL 94
           +G+G FG VY+G    +  G     VA+  ++  +   E  EF++E + M   N CH ++
Sbjct: 14  LGQGSFGMVYEGLAKGVVKGEPETRVAIKTVNENASMRERIEFLNEASVMKEFN-CH-HV 71

Query: 95  VKLHGGCIDG 104
           V+L G    G
Sbjct: 72  VRLLGVVSTG 81

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR and IGF-1R, which share 84% sequence identity in their kinase domains, display physiologically distinct yet overlapping functions in cell growth, differentiation, and metabolism. InsR activation leads primarily to metabolic effects while IGF-1R activation stimulates mitogenic pathways. In cells expressing both receptors, InsR/IGF-1R hybrids are found together with classical receptors. Both receptors can interact with common adaptor molecules such as IRS-1 and IRS-2. Length = 277

>gnl|CDD|223589 COG0515, SPS1, Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]

 Score = 40.5 bits (93), Expect = 2e-04
 Identities = 34/137 (24%), Positives = 52/137 (37%), Gaps = 21/137 (15%)

Query: 35  GFRTSNKIGEGGFGSVYKGRLEDGTVVAVNVLSVESKQGETE---FMSEVASMANINICH 91
            +R   K+GEG FG VY  R  D  +VA+ VL+ + +    E   F+ E+  +A++N   
Sbjct: 1   SYRILRKLGEGSFGEVYLAR--DRKLVALKVLAKKLESKSKEVERFLREIQILASLN-HP 57

Query: 92  ENLVKLHGGCIDGPSRILAPLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIA 151
            N+VKL+    D  S  L        +L    K                   +   +   
Sbjct: 58  PNIVKLYDFFQDEGSLYLVMEYVDGGSLEDLLK---------------KIGRKGPLSESE 102

Query: 152 RREIALGIARGLAYIHE 168
              I   I   L Y+H 
Sbjct: 103 ALFILAQILSALEYLHS 119

Length = 384

>gnl|CDD|133179 cd05048, PTKc_Ror, Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors

 Score = 40.1 bits (94), Expect = 2e-04
 Identities = 25/72 (34%), Positives = 34/72 (47%), Gaps = 9/72 (12%)

Query: 37  RTSNKIGEGGFGSVYKGRL------EDGTVVAVNVLSVE-SKQGETEFMSEVASMANINI 89
           R   ++GEG FG VYKG L         T VA+  L      + + EF  E   M+++  
Sbjct: 8   RFLEELGEGAFGKVYKGELTGPNERLSATSVAIKTLKENAEPKVQQEFRQEAELMSDLQ- 66

Query: 90  CHENLVKLHGGC 101
            H N+V L G C
Sbjct: 67  -HPNIVCLLGVC 77

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. Ror kinases are expressed in many tissues during development. They play important roles in bone and heart formation. Mutations in human Ror2 result in two different bone development genetic disorders, recessive Robinow syndrome and brachydactyly type B. Drosophila Ror is expressed only in the developing nervous system during neurite outgrowth and neuronal differentiation, suggesting a role for Drosophila Ror in neural development. More recently, mouse Ror1 and Ror2 have also been found to play an important role in regulating neurite growth in central neurons. Ror1 and Ror2 are believed to have some overlapping and redundant functions. Length = 283

>gnl|CDD|173637 cd05059, PTKc_Tec_like, Catalytic domain of Tec-like Protein Tyrosine Kinases

 Score = 39.7 bits (93), Expect = 3e-04
 Identities = 22/69 (31%), Positives = 35/69 (50%), Gaps = 4/69 (5%)

Query: 42  IGEGGFGSVYKGRLEDGTVVAVNVLSVESKQGETEFMSEVASMANINICHENLVKLHGGC 101
           +G G FG V+ G+      VA+ ++  E    E +F+ E   M  ++  H NLV+L+G C
Sbjct: 12  LGSGQFGVVHLGKWRGKIDVAIKMIR-EGAMSEDDFIEEAKVMMKLS--HPNLVQLYGVC 68

Query: 102 ID-GPSRIL 109
               P  I+
Sbjct: 69  TKQRPIFIV 77

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. In addition, some members contain the Tec homology (TH) domain, which contains proline-rich and zinc-binding regions. Tec kinases form the second largest subfamily of nRTKs and are expressed mainly by haematopoietic cells, although Tec and Bmx are also found in endothelial cells. B-cells express Btk and Tec, while T-cells express Itk, Txk, and Tec. Collectively, Tec kinases are expressed in a variety of myeloid cells such as mast cells, platelets, macrophages, and dendritic cells. Each Tec kinase shows a distinct cell-type pattern of expression. The function of Tec kinases in lymphoid cells have been studied extensively. They play important roles in the development, differentiation, maturation, regulation, survival, and function of B-cells and T-cells. Mutations in Btk cause the severe B-cell immunodeficiency, X-linked agammaglobulinaemia (XLA). Length = 256

>gnl|CDD|173755 cd08215, STKc_Nek, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase

 Score = 39.4 bits (93), Expect = 3e-04
 Identities = 18/62 (29%), Positives = 32/62 (51%), Gaps = 5/62 (8%)

Query: 40 NKIGEGGFGSVYKGR-LEDGTVVAVNVLSV-ESKQGETEF-MSEVASMANINICHENLVK 96
           +IG+G FG VY  R   DG +  +  + +    + E E  ++EV  +  +N  H N++K
Sbjct: 6  KQIGKGSFGKVYLVRRKSDGKLYVLKEIDLSNMSEKEREDALNEVKILKKLN--HPNIIK 63

Query: 97 LH 98
           +
Sbjct: 64 YY 65

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Length = 258

>gnl|CDD|143341 cd07836, STKc_Pho85, Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85

 Score = 39.4 bits (92), Expect = 3e-04
 Identities = 22/65 (33%), Positives = 41/65 (63%), Gaps = 4/65 (6%)

Query: 36 FRTSNKIGEGGFGSVYKGR-LEDGTVVAVNVLSVESKQGE-TEFMSEVASMANINICHEN 93
          F+   K+GEG + +VYKGR    G +VA+  + +++++G  +  + E++ M  +   HEN
Sbjct: 2  FKQLEKLGEGTYATVYKGRNRTTGEIVALKEIHLDAEEGTPSTAIREISLMKELK--HEN 59

Query: 94 LVKLH 98
          +V+LH
Sbjct: 60 IVRLH 64

Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment. It is not essential for yeast viability and is the functional homolog of mammalian CDK5, which plays a role in central nervous system development. Length = 284

>gnl|CDD|132975 cd06644, STKc_STK10_LOK, Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase

 Score = 39.6 bits (92), Expect = 4e-04
 Identities = 27/92 (29%), Positives = 43/92 (46%), Gaps = 21/92 (22%)

Query: 41  KIGEGGFGSVYKGR-LEDGTVVAVNVLSVESKQGETEFMSEVASMANINICHENLVKLHG 99
           ++G+G FG VYK +  E G + A  V+  +S++   ++M E+  +A  N  H  +VKL G
Sbjct: 19  ELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYMVEIEILATCN--HPYIVKLLG 76

Query: 100 GCIDGPSRILAPLQASIEALFLFTKLWKMDKF 131
                             A +   KLW M +F
Sbjct: 77  ------------------AFYWDGKLWIMIEF 90

Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types. Length = 292

>gnl|CDD|132967 cd06636, STKc_MAP4K4_6, Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6

 Score = 39.2 bits (91), Expect = 4e-04
 Identities = 39/137 (28%), Positives = 61/137 (44%), Gaps = 21/137 (15%)

Query: 36  FRTSNKIGEGGFGSVYKGR-LEDGTVVAVNVLSVESKQGETEFMSEVASMANINICHENL 94
           F     +G G +G VYKGR ++ G + A+ V+ V   + E E   E+ +M      H N+
Sbjct: 18  FELVEVVGNGTYGQVYKGRHVKTGQLAAIKVMDVTEDE-EEEIKLEI-NMLKKYSHHRNI 75

Query: 95  VKLHGGCIDGPSRILAPLQASIEALFLFTKLWKMDKFIS----IYVVSGSKKNRVKFNWI 150
              +G  I    +   P            +LW + +F        +V  +K N +K +WI
Sbjct: 76  ATYYGAFI----KKSPPGHDD--------QLWLVMEFCGAGSVTDLVKNTKGNALKEDWI 123

Query: 151 ARREIALGIARGLAYIH 167
           A   I   I RGLA++H
Sbjct: 124 AY--ICREILRGLAHLH 138

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAP4K4 is also called Nck Interacting kinase (NIK). It facilitates the activation of the MAPKs, extracellular signal-regulated kinase (ERK) 1, ERK2, and c-Jun N-terminal kinase (JNK), by phosphorylating and activating MEKK1. MAP4K4 plays a role in tumor necrosis factor (TNF) alpha-induced insulin resistance. MAP4K4 silencing in skeletal muscle cells from type II diabetic patients restores insulin-mediated glucose uptake. MAP4K4, through JNK, also plays a broad role in cell motility, which impacts inflammation, homeostasis, as well as the invasion and spread of cancer. MAP4K4 is found to be highly expressed in most tumor cell lines relative to normal tissue. MAP4K6 (also called MINK for Misshapen/NIKs-related kinase) is activated after Ras induction and mediates activation of p38 MAPK. MAP4K6 plays a role in cell cycle arrest, cytoskeleton organization, cell adhesion, and cell motility. Length = 282

>gnl|CDD|143344 cd07839, STKc_CDK5, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5

 Score = 39.3 bits (92), Expect = 5e-04
 Identities = 21/66 (31%), Positives = 35/66 (53%), Gaps = 15/66 (22%)

Query: 41 KIGEGGFGSVYKGR-LEDGTVVAVNVLSVESK-QGETEFMSEVASMANINIC------HE 92
          KIGEG +G+V+K +  E   +VA+  + ++   +G       V S A   IC      H+
Sbjct: 7  KIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEG-------VPSSALREICLLKELKHK 59

Query: 93 NLVKLH 98
          N+V+L+
Sbjct: 60 NIVRLY 65

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also important in synaptic plasticity and learning. CDK5 also participates in protecting against cell death and promoting angiogenesis. Impaired CDK5 activity is implicated in Alzheimer's disease, amyotrophic lateral sclerosis, Parkinson's disease, Huntington's disease and acute neuronal injury. Length = 284

>gnl|CDD|173657 cd05113, PTKc_Btk_Bmx, Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome

 Score = 39.1 bits (91), Expect = 5e-04
 Identities = 21/61 (34%), Positives = 32/61 (52%), Gaps = 3/61 (4%)

Query: 41  KIGEGGFGSVYKGRLEDGTVVAVNVLSVESKQGETEFMSEVASMANINICHENLVKLHGG 100
           ++G G FG V  G+      VA+ ++  E    E EF+ E   M  + + HE LV+L+G 
Sbjct: 11  ELGTGQFGVVKYGKWRGQYDVAIKMIK-EGSMSEDEFIEEAKVM--MKLSHEKLVQLYGV 67

Query: 101 C 101
           C
Sbjct: 68  C 68

Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. In addition, Btk contains the Tec homology (TH) domain with proline-rich and zinc-binding regions. Tec kinases are expressed mainly by haematopoietic cells. Btk is expressed in B-cells, and a variety of myeloid cells including mast cells, platelets, neutrophils, and dendrictic cells. It interacts with a variety of partners, from cytosolic proteins to nuclear transcription factors, suggesting a diversity of functions. Stimulation of a diverse array of cell surface receptors, including antigen engagement of the B-cell receptor (BCR), leads to PH-mediated membrane translocation of Btk and subsequent phosphorylation by Src kinase and activation. Btk plays an important role in the life cycle of B-cells including their development, differentiation, proliferation, survival, and apoptosis. Mutations in Btk cause the primary immunodeficiency disease, X-linked agammaglobulinaemia (XLA) in humans. Bmx is primarily expressed in bone marrow and the arterial endothelium, and plays an important role in ischemia-induced angiogenesis. It facilitates arterial growth, capillary formation, vessel maturation, and bone marrow-derived endothelial progenitor cell mobilization. Length = 256

>gnl|CDD|143333 cd05118, STKc_CMGC, Catalytic domain of CMGC family Serine/Threonine Kinases

 Score = 38.8 bits (91), Expect = 5e-04
 Identities = 20/62 (32%), Positives = 31/62 (50%), Gaps = 7/62 (11%)

Query: 41 KIGEGGFGSVYKGR-LEDGTVVAVNVLSVESKQGETE---FMSEVASMANINICHENLVK 96
          KIGEG +G VYK R    G +VA+  +     + E      + E+  +  +N  H N++K
Sbjct: 6  KIGEGTYGVVYKARDKLTGEIVAIKKIK-LRFESEGIPKTALREIKLLKELN--HPNIIK 62

Query: 97 LH 98
          L 
Sbjct: 63 LL 64

Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Length = 283

>gnl|CDD|132968 cd06637, STKc_TNIK, Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase

 Score = 38.9 bits (90), Expect = 6e-04
 Identities = 36/140 (25%), Positives = 62/140 (44%), Gaps = 25/140 (17%)

Query: 36  FRTSNKIGEGGFGSVYKGR-LEDGTVVAVNVLSVESKQGETEFMSEVASMANINICHENL 94
           F     +G G +G VYKGR ++ G + A+ V+ V   + E E   E+  +   +  H N+
Sbjct: 8   FELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDE-EEEIKQEINMLKKYS-HHRNI 65

Query: 95  VKLHGGCI--DGPSRILAPLQASIEALFLFTKLWKMDKFIS----IYVVSGSKKNRVKFN 148
              +G  I  + P               +  +LW + +F        ++  +K N +K  
Sbjct: 66  ATYYGAFIKKNPPG--------------MDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEE 111

Query: 149 WIARREIALGIARGLAYIHE 168
           WIA   I   I RGL+++H+
Sbjct: 112 WIAY--ICREILRGLSHLHQ 129

Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activates the c-Jun N-terminal kinase (JNK) pathway and plays a role in regulating the actin cytoskeleton. Length = 272

>gnl|CDD|173655 cd05110, PTKc_HER4, Catalytic domain of the Protein Tyrosine Kinase, HER4

 Score = 38.9 bits (90), Expect = 6e-04
 Identities = 42/136 (30%), Positives = 63/136 (46%), Gaps = 32/136 (23%)

Query: 42  IGEGGFGSVYKGRL--EDGTV---VAVNVLS-VESKQGETEFMSEVASMANINICHENLV 95
           +G G FG+VYKG    E  TV   VA+ +L+     +   EFM E   MA+++  H +LV
Sbjct: 15  LGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMD--HPHLV 72

Query: 96  KLHGGCIDGPSRILAPLQASIEALFLFTKLWKMDKFISIYVVSGSKKN---RVKFNWIAR 152
           +L G C       L+P       + L T+L  M     +  V   K N   ++  NW  +
Sbjct: 73  RLLGVC-------LSP------TIQLVTQL--MPHGCLLDYVHEHKDNIGSQLLLNWCVQ 117

Query: 153 REIALGIARGLAYIHE 168
                 IA+G+ Y+ E
Sbjct: 118 ------IAKGMMYLEE 127

Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as binding sites for downstream signaling molecules. Ligands that bind HER4 fall into two groups, the neuregulins (or heregulins) and some EGFR (HER1) ligands including betacellulin, HBEGF, and epiregulin. All four neuregulins (NRG1-4) interact with HER4. Upon ligand binding, HER4 forms homo- or heterodimers with other HER proteins. HER4 is essential in embryonic development. It is implicated in mammary gland, cardiac, and neural development. As a postsynaptic receptor of NRG1, HER4 plays an important role in synaptic plasticity and maturation. The impairment of NRG1/HER4 signaling may contribute to schizophrenia. Length = 303

>gnl|CDD|173631 cd05045, PTKc_RET, Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein

 Score = 38.8 bits (90), Expect = 6e-04
 Identities = 36/142 (25%), Positives = 59/142 (41%), Gaps = 19/142 (13%)

Query: 42  IGEGGFGSVYKGR------LEDGTVVAVNVLSVESKQGE-TEFMSEVASMANINICHENL 94
           +GEG FG V K            T VAV +L   +   E  + +SE   +  +N  H ++
Sbjct: 8   LGEGEFGKVVKATAFRLKGRAGYTTVAVKMLKENASSSELRDLLSEFNLLKQVN--HPHV 65

Query: 95  VKLHGGCIDGPSRILAPLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARRE 154
           +KL+G C      +L    A   +L  F +  +  K    Y+ S   +N    +    R 
Sbjct: 66  IKLYGACSQDGPLLLIVEYAKYGSLRSFLRESR--KVGPSYLGSDGNRNSSYLDNPDERA 123

Query: 155 IALG--------IARGLAYIHE 168
           + +G        I+RG+ Y+ E
Sbjct: 124 LTMGDLISFAWQISRGMQYLAE 145

Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leading to autophosphorylation, activation, and intracellular signaling. RET is essential for the development of the sympathetic, parasympathetic and enteric nervous systems, and the kidney. RET disruption by germline mutations causes diseases in humans including congenital aganglionosis of the gastrointestinal tract (Hirschsprung's disease) and three related inherited cancers: multiple endocrine neoplasia type 2A (MEN2A), MEN2B, and familial medullary thyroid carcinoma (FMTC). Length = 290

>gnl|CDD|173733 cd07829, STKc_CDK_like, Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases

 Score = 38.6 bits (91), Expect = 6e-04
 Identities = 19/63 (30%), Positives = 33/63 (52%), Gaps = 9/63 (14%)

Query: 41 KIGEGGFGSVYKGR-LEDGTVVAVNVLSVESKQGETEF----MSEVASMANINICHENLV 95
          K+GEG +G VYK R  + G +VA+  + ++    E       + E++ +  +   H N+V
Sbjct: 6  KLGEGTYGVVYKARDKKTGEIVALKKIRLD--NEEEGIPSTALREISLLKELK--HPNIV 61

Query: 96 KLH 98
          KL 
Sbjct: 62 KLL 64

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the early G1 phase by CDK4 or CDK6, the G1/S phase transition by CDK2, or the entry of mitosis by CDK1. They also exhibit overlapping cyclin specificity and functions in certain conditions. Knockout mice with a single CDK deleted remain viable with specific phenotypes, showing that some CDKs can compensate for each other. For example, CDK4 can compensate for the loss of CDK6, however, double knockout mice with both CDK4 and CDK6 deleted die in utero. CDK8 and CDK9 are mainly involved in transcription while CDK5 is implicated in neuronal function. CDK7 plays essential roles in both the cell cycle as a CDK-Activating Kinase (CAK) and in transcription as a component of the general transcription factor TFIIH. Length = 282

>gnl|CDD|173751 cd07860, STKc_CDK2_3, Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3

 Score = 38.2 bits (89), Expect = 8e-04
 Identities = 24/66 (36%), Positives = 36/66 (54%), Gaps = 5/66 (7%)

Query: 36 FRTSNKIGEGGFGSVYKGR-LEDGTVVAVNV--LSVESKQGETEFMSEVASMANINICHE 92
          F+   KIGEG +G VYK R    G VVA+    L  E++   +  + E++ +  +N  H 
Sbjct: 2  FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN--HP 59

Query: 93 NLVKLH 98
          N+VKL 
Sbjct: 60 NIVKLL 65

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex plays a role in regulating DNA replication. CDK2, together with CDK4, also regulates embryonic cell proliferation. Despite these important roles, mice deleted for the cdk2 gene are viable and normal except for being sterile. This may be due to compensation provided by CDK1 (also called Cdc2), which can also bind cyclin E and drive the G1 to S phase transition. CDK3 is regulated by cyclin C and it phosphorylates pRB specifically during the G0/G1 transition. This phosphorylation is required for cells to exit G0 efficiently and enter the G1 phase. Length = 284

>gnl|CDD|173642 cd05075, PTKc_Axl, Catalytic domain of the Protein Tyrosine Kinase, Axl

 Score = 38.1 bits (88), Expect = 0.001
 Identities = 31/139 (22%), Positives = 64/139 (46%), Gaps = 31/139 (22%)

Query: 42  IGEGGFGSVYKGRL-EDGTVVAVNV----LSVESKQGETEFMSEVASMANINICHENLVK 96
           +GEG FGSV +G+L +D +++ V V    +++ ++    +F+SE   M   +  H N+++
Sbjct: 7   LGEGEFGSVMEGQLNQDDSILKVAVKTMKIAICTRSEMEDFLSEAVCMKEFD--HPNVMR 64

Query: 97  LHGGCIDGPSR-------ILAPL--QASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKF 147
           L G C+            ++ P      + +  L+++L    +++   ++       VKF
Sbjct: 65  LIGVCLQTVESEGYPSPVVILPFMKHGDLHSFLLYSRLGDCPQYLPTQML-------VKF 117

Query: 148 NWIARREIALGIARGLAYI 166
                      IA G+ Y+
Sbjct: 118 --------MTDIASGMEYL 128

Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transformed cells. Axl signaling is important in many cellular functions such as survival, anti-apoptosis, proliferation, migration, and adhesion. Axl was originally isolated from patients with chronic myelogenous leukemia and a chronic myeloproliferative disorder. Axl is overexpressed in many human cancers including colon, squamous cell, thyroid, breast, and lung carcinomas. Length = 272

>gnl|CDD|133221 cd05090, PTKc_Ror1, Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1

 Score = 37.7 bits (87), Expect = 0.002
 Identities = 23/69 (33%), Positives = 35/69 (50%), Gaps = 8/69 (11%)

Query: 37 RTSNKIGEGGFGSVYKGRL-----EDGTVVAVNVLS-VESKQGETEFMSEVASMANINIC 90
          R   ++GE  FG +YKG L     +   +VA+  L  + + Q   EF  E + MA ++  
Sbjct: 8  RFMEELGECAFGKIYKGHLYLPGMDHAQLVAIKTLKDINNPQQWGEFQQEASLMAELH-- 65

Query: 91 HENLVKLHG 99
          H N+V L G
Sbjct: 66 HPNIVCLLG 74

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. Ror kinases are expressed in many tissues during development. Avian Ror1 was found to be involved in late limb development. Studies in mice reveal that Ror1 is important in the regulation of neurite growth in central neurons, as well as in respiratory development. Loss of Ror1 also enhances the heart and skeletal abnormalities found in Ror2-deficient mice. Length = 283

>gnl|CDD|173764 cd08224, STKc_Nek6_Nek7, Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7

 Score = 37.4 bits (87), Expect = 0.002
 Identities = 21/75 (28%), Positives = 35/75 (46%), Gaps = 6/75 (8%)

Query: 33  TNGFRTSNKIGEGGFGSVYKGR-LEDGTVVA---VNVLSVESKQGETEFMSEVASMANIN 88
              F+   KIG+G F  VYK   L DG VVA   V +  +   +   + + E+  +  ++
Sbjct: 1   LGNFKIEKKIGKGQFSVVYKAICLLDGRVVALKKVQIFEMMDAKARQDCLKEIDLLKQLD 60

Query: 89  ICHENLVKLHGGCID 103
             H N++K     I+
Sbjct: 61  --HPNVIKYLASFIE 73

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may also be regulators of the p70 ribosomal S6 kinase. Length = 267

>gnl|CDD|132942 cd06611, STKc_SLK_like, Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases

 Score = 37.4 bits (87), Expect = 0.002
 Identities = 19/60 (31%), Positives = 33/60 (55%), Gaps = 3/60 (5%)

Query: 42  IGEGGFGSVYKGR-LEDGTVVAVNVLSVESKQGETEFMSEVASMANINICHENLVKLHGG 100
           +G+G FG VYK +  E G   A  ++ +ES++   +FM E+  ++     H N+V L+  
Sbjct: 13  LGDGAFGKVYKAQHKETGLFAAAKIIQIESEEELEDFMVEIDILSECK--HPNIVGLYEA 70

Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. SmSLK is capable of activating the MAPK Jun N-terminal kinase (JNK) pathway in human embryonic kidney (HEK) cells as well as in Xenopus oocytes. It may participate in regulating MAPK cascades during host-parasite interactions. Length = 280

>gnl|CDD|132974 cd06643, STKc_SLK, Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase

 Score = 37.3 bits (86), Expect = 0.002
 Identities = 20/58 (34%), Positives = 36/58 (62%), Gaps = 3/58 (5%)

Query: 41 KIGEGGFGSVYKGR-LEDGTVVAVNVLSVESKQGETEFMSEVASMANINICHENLVKL 97
          ++G+G FG VYK +  E G + A  V+  +S++   ++M E+  +A+ +  H N+VKL
Sbjct: 12 ELGDGAFGKVYKAQNKETGVLAAAKVIDTKSEEELEDYMVEIDILASCD--HPNIVKL 67

Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration. Length = 282

>gnl|CDD|173738 cd07835, STKc_CDK1_like, Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases

 Score = 36.9 bits (86), Expect = 0.002
 Identities = 22/64 (34%), Positives = 35/64 (54%), Gaps = 11/64 (17%)

Query: 41 KIGEGGFGSVYKGR-LEDGTVVAVNVLSVESKQGETE-----FMSEVASMANINICHENL 94
          KIGEG +G VYK R    G +VA+  + +E+   E E      + E++ +  +N  H N+
Sbjct: 6  KIGEGTYGVVYKARDKLTGEIVALKKIRLET---EDEGVPSTAIREISLLKELN--HPNI 60

Query: 95 VKLH 98
          V+L 
Sbjct: 61 VRLL 64

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2 phase entry and progression while the CDK1/cyclin B complex is critical for G2 to M phase transition. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex plays a role in regulating DNA replication. Studies in knockout mice revealed that CDK1 can compensate for the loss of the cdk2 gene as it can also bind cyclin E and drive G1 to S phase transition. CDK3 is regulated by cyclin C and it phosphorylates pRB specifically during the G0/G1 transition. This phosphorylation is required for cells to exit G0 efficiently and enter the G1 phase. Length = 283

>gnl|CDD|173648 cd05092, PTKc_TrkA, Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A

 Score = 36.5 bits (84), Expect = 0.003
 Identities = 19/70 (27%), Positives = 34/70 (48%), Gaps = 8/70 (11%)

Query: 41  KIGEGGFGSVYKGRL------EDGTVVAVNVLSVESKQGETEFMSEVASMANINICHENL 94
           ++GEG FG V+          +D  +VAV  L   S+    +F  E   +  +   H+++
Sbjct: 12  ELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTVLQ--HQHI 69

Query: 95  VKLHGGCIDG 104
           V+ +G C +G
Sbjct: 70  VRFYGVCTEG 79

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory and sympathetic neurons of the peripheral nervous system, and in basal forebrain cholinergic neurons of the central nervous system. It is critical for neuronal growth, differentiation and survival. Alternative TrkA splicing has been implicated as a pivotal regulator of neuroblastoma (NB) behavior. Normal TrkA expression is associated with better NB prognosis, while the hypoxia-regulated TrkAIII splice variant promotes NB pathogenesis and progression. Aberrant TrkA expression has also been demonstrated in non-neural tumors including prostate, breast, lung, and pancreatic cancers. Length = 280

>gnl|CDD|173728 cd06614, STKc_PAK, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase

 Score = 36.4 bits (85), Expect = 0.004
 Identities = 18/58 (31%), Positives = 25/58 (43%), Gaps = 4/58 (6%)

Query: 41 KIGEGGFGSVYKG-RLEDGTVVAVNVLSVESKQGETEFMSEVASMANINICHENLVKL 97
          KIGEG  G VYK      G  VA+  + +  +  E     E+  M +    H N+V  
Sbjct: 26 KIGEGASGEVYKATDRATGKEVAIKKMRLRKQNKELIIN-EILIMKDCK--HPNIVDY 80

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). Group II PAKs contain a PBD and a catalytic domain, but lack other motifs found in group I PAKs. Since group II PAKs do not contain an obvious AID, they may be regulated differently from group I PAKs. Group I PAKs interact with the SH3 containing proteins Nck, Grb2 and PIX; no such binding has been demonstrated for group II PAKs. Length = 286

>gnl|CDD|173638 cd05065, PTKc_EphR_B, Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors

 Score = 36.4 bits (84), Expect = 0.004
 Identities = 20/63 (31%), Positives = 32/63 (50%), Gaps = 7/63 (11%)

Query: 42 IGEGGFGSVYKGRLE----DGTVVAVNVLSV-ESKQGETEFMSEVASMANINICHENLVK 96
          IG G FG V +GRL+        VA+  L    +++   +F+SE + M   +  H N++ 
Sbjct: 12 IGAGEFGEVCRGRLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFD--HPNIIH 69

Query: 97 LHG 99
          L G
Sbjct: 70 LEG 72

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). Ephrin/EphR interaction mainly results in cell-cell repulsion or adhesion. EphBRs play important roles in synapse formation and plasticity, spine morphogenesis, axon guidance, and angiogenesis. In the intestinal epithelium, EphBRs are Wnt signaling target genes that control cell compartmentalization. They function as suppressors of color cancer progression. Length = 269

>gnl|CDD|143374 cd07869, STKc_PFTAIRE1, Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase

 Score = 36.6 bits (84), Expect = 0.004
 Identities = 20/66 (30%), Positives = 39/66 (59%), Gaps = 2/66 (3%)

Query: 34 NGFRTSNKIGEGGFGSVYKGRLE-DGTVVAVNVLSVESKQGETEFMSEVASMANINICHE 92
          + +    K+GEG + +VYKG+ + +G +VA+ V+ ++ ++G T F +   +     + H 
Sbjct: 5  DSYEKLEKLGEGSYATVYKGKSKVNGKLVALKVIRLQEEEG-TPFTAIREASLLKGLKHA 63

Query: 93 NLVKLH 98
          N+V LH
Sbjct: 64 NIVLLH 69

Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 and is inhibited by the p21 cell cycle inhibitor. It has also been shown to interact with the membrane-associated cyclin Y, which recruits the protein to the plasma membrane. Length = 303

>gnl|CDD|133202 cd05071, PTKc_Src, Catalytic domain of the Protein Tyrosine Kinase, Src

 Score = 36.2 bits (83), Expect = 0.004
 Identities = 34/137 (24%), Positives = 57/137 (41%), Gaps = 20/137 (14%)

Query: 30  KIATNGFRTSNKIGEGGFGSVYKGRLEDGTVVAVNVLSVESKQGETEFMSEVASMANINI 89
           +I     R   K+G+G FG V+ G     T VA+  L   +   E  F+ E   M  +  
Sbjct: 2   EIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA-FLQEAQVMKKLR- 59

Query: 90  CHENLVKLHGGCIDGPSRILAPLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNW 149
            HE LV+L+                S E +++ T+   M K   +  + G     ++   
Sbjct: 60  -HEKLVQLYA-------------VVSEEPIYIVTEY--MSKGSLLDFLKGEMGKYLRLPQ 103

Query: 150 IARREIALGIARGLAYI 166
           +   ++A  IA G+AY+
Sbjct: 104 LV--DMAAQIASGMAYV 118

Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Src also play a role in regulating cell adhesion, invasion, and motility in cancer cells and tumor vasculature, contributing to cancer progression and metastasis. Elevated levels of Src kinase activity have been reported in a variety of human cancers. Several inhibitors of Src have been developed as anti-cancer drugs. Src is also implicated in acute inflammatory responses and osteoclast function. Length = 262

>gnl|CDD|133214 cd05083, PTKc_Chk, Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase

 Score = 36.5 bits (84), Expect = 0.004
 Identities = 22/59 (37%), Positives = 31/59 (52%), Gaps = 5/59 (8%)

Query: 41 KIGEGGFGSVYKGRLEDGTVVAVNVLSVESKQGETEFMSEVASMANINICHENLVKLHG 99
           IGEG FG+V +G    G  VAV  +  +       F+ E A M  ++  H+NLV+L G
Sbjct: 13 IIGEGEFGAVLQGEYT-GQKVAVKNIKCDVTA--QAFLEETAVMTKLH--HKNLVRLLG 66

Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src kinases using a noncatalytic mechanism by simply binding to them. As a negative regulator of Src kinases, Chk may play important roles in cell proliferation, survival, and differentiation, and consequently, in cancer development and progression. Chk is expressed in brain and hematopoietic cells. Studies in mice reveal that Chk is not functionally redundant with Csk and that it plays an important role as a regulator of immune responses. Chk also plays a role in neural differentiation in a manner independent of Src by enhancing Mapk activation via Ras-mediated signaling. Length = 254

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	174
KOG1187	361	consensus Serine/threonine protein kinase [Signal	99.91
KOG0595	429	consensus Serine/threonine-protein kinase involved	99.83
KOG0575	592	consensus Polo-like serine/threonine protein kinas	99.81
KOG0197	468	consensus Tyrosine kinases [Signal transduction me	99.8
KOG0194	474	consensus Protein tyrosine kinase [Signal transduc	99.79
KOG0192	362	consensus Tyrosine kinase specific for activated (	99.79
KOG1026	774	consensus Nerve growth factor receptor TRKA and re	99.79
KOG0600	560	consensus Cdc2-related protein kinase [Cell cycle	99.77
KOG0615	475	consensus Serine/threonine protein kinase Chk2 and	99.77
KOG0193	678	consensus Serine/threonine protein kinase RAF [Sig	99.76
KOG0581	364	consensus Mitogen-activated protein kinase kinase	99.73
KOG0591	375	consensus NIMA (never in mitosis)-related G2-speci	99.73
KOG0598	357	consensus Ribosomal protein S6 kinase and related	99.73
KOG0597	808	consensus Serine-threonine protein kinase FUSED [G	99.72
KOG0659	318	consensus Cdk activating kinase (CAK)/RNA polymera	99.71
KOG0661	538	consensus MAPK related serine/threonine protein ki	99.71
KOG1094	807	consensus Discoidin domain receptor DDR1 [Signal t	99.7
KOG0593	396	consensus Predicted protein kinase KKIAMRE [Genera	99.7
KOG0616	355	consensus cAMP-dependent protein kinase catalytic	99.68
KOG0580	281	consensus Serine/threonine protein kinase [Cell cy	99.68
cd05599	364	STKc_NDR_like Catalytic domain of Nuclear Dbf2-Rel	99.67
PTZ00263	329	protein kinase A catalytic subunit; Provisional	99.65
cd05064	266	PTKc_EphR_A10 Catalytic domain of the Protein Tyro	99.65
cd05629	377	STKc_NDR_like_fungal Catalytic domain of Fungal Nu	99.65
cd05626	381	STKc_LATS2 Catalytic domain of the Protein Serine/	99.65
cd05598	376	STKc_LATS Catalytic domain of the Protein Serine/T	99.65
KOG1095	1025	consensus Protein tyrosine kinase [Signal transduc	99.64
cd05612	291	STKc_PRKX_like Catalytic domain of PRKX-like Prote	99.64
PF07714	259	Pkinase_Tyr: Protein tyrosine kinase Protein kinas	99.64
KOG0583	370	consensus Serine/threonine protein kinase [Signal	99.64
cd05628	363	STKc_NDR1 Catalytic domain of the Protein Serine/T	99.64
cd07871	288	STKc_PCTAIRE3 Catalytic domain of the Serine/Threo	99.64
cd05104	375	PTKc_Kit Catalytic domain of the Protein Tyrosine	99.64
KOG0198	313	consensus MEKK and related serine/threonine protei	99.64
KOG0662	292	consensus Cyclin-dependent kinase CDK5 [Intracellu	99.63
cd05096	304	PTKc_DDR1 Catalytic domain of the Protein Tyrosine	99.63
cd05625	382	STKc_LATS1 Catalytic domain of the Protein Serine/	99.63
KOG0611	668	consensus Predicted serine/threonine protein kinas	99.63
cd05600	333	STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p-	99.62
KOG0663	419	consensus Protein kinase PITSLRE and related kinas	99.62
cd05114	256	PTKc_Tec_Rlk Catalytic domain of the Protein Tyros	99.62
cd07869	303	STKc_PFTAIRE1 Catalytic domain of the Serine/Threo	99.62
KOG4278	1157	consensus Protein tyrosine kinase [Signal transduc	99.61
KOG0582	516	consensus Ste20-like serine/threonine protein kina	99.61
KOG0607	463	consensus MAP kinase-interacting kinase and relate	99.61
KOG0578	550	consensus p21-activated serine/threonine protein k	99.61
KOG0694	694	consensus Serine/threonine protein kinase [Signal	99.61
KOG0585	576	consensus Ca2+/calmodulin-dependent protein kinase	99.61
KOG0196	996	consensus Tyrosine kinase, EPH (ephrin) receptor f	99.61
cd05597	331	STKc_DMPK_like Catalytic domain of Myotonic Dystro	99.61
KOG2345	302	consensus Serine/threonine protein kinase/TGF-beta	99.61
cd05605	285	STKc_GRK4_like Catalytic domain of G protein-coupl	99.61
cd06611	280	STKc_SLK_like Catalytic domain of Ste20-like kinas	99.61
cd05573	350	STKc_ROCK_NDR_like Catalytic domain of ROCK- and N	99.61
cd05631	285	STKc_GRK4 Catalytic domain of the Protein Serine/T	99.61
KOG4257	974	consensus Focal adhesion tyrosine kinase FAK, cont	99.61
cd06646	267	STKc_MAP4K5 Catalytic domain of the Protein Serine	99.6
KOG0594	323	consensus Protein kinase PCTAIRE and related kinas	99.6
cd05113	256	PTKc_Btk_Bmx Catalytic domain of the Protein Tyros	99.6
cd05571	323	STKc_PKB Catalytic domain of the Protein Serine/Th	99.6
cd05102	338	PTKc_VEGFR3 Catalytic domain of the Protein Tyrosi	99.6
cd06649	331	PKc_MEK2 Catalytic domain of the dual-specificity	99.6
cd05627	360	STKc_NDR2 Catalytic domain of the Protein Serine/T	99.6
cd05148	261	PTKc_Srm_Brk Catalytic domain of the Protein Tyros	99.6
PTZ00426	340	cAMP-dependent protein kinase catalytic subunit; P	99.6
cd05596	370	STKc_ROCK Catalytic domain of the Protein Serine/T	99.6
cd06615	308	PKc_MEK Catalytic domain of the dual-specificity P	99.6
cd06650	333	PKc_MEK1 Catalytic domain of the dual-specificity	99.6
KOG0605	550	consensus NDR and related serine/threonine kinases	99.6
cd05595	323	STKc_PKB_beta Catalytic domain of the Protein Seri	99.6
cd05621	370	STKc_ROCK2 Catalytic domain of the Protein Serine/	99.6
KOG0584	632	consensus Serine/threonine protein kinase [General	99.59
KOG0588	786	consensus Serine/threonine protein kinase [Cell cy	99.59
KOG0592	604	consensus 3-phosphoinositide-dependent protein kin	99.59
cd07848	287	STKc_CDKL5 Catalytic domain of the Serine/Threonin	99.59
cd05072	261	PTKc_Lyn Catalytic domain of the Protein Tyrosine	99.59
KOG1025	1177	consensus Epidermal growth factor receptor EGFR an	99.59
cd05593	328	STKc_PKB_gamma Catalytic domain of the Protein Ser	99.59
KOG0199	1039	consensus ACK and related non-receptor tyrosine ki	99.59
cd05622	371	STKc_ROCK1 Catalytic domain of the Protein Serine/	99.59
cd08228	267	STKc_Nek6 Catalytic domain of the Protein Serine/T	99.59
cd07872	309	STKc_PCTAIRE2 Catalytic domain of the Serine/Threo	99.58
cd05601	330	STKc_CRIK Catalytic domain of the Protein Serine/T	99.58
cd05106	374	PTKc_CSF-1R Catalytic domain of the Protein Tyrosi	99.58
KOG0032	382	consensus Ca2+/calmodulin-dependent protein kinase	99.58
KOG4236	888	consensus Serine/threonine protein kinase PKC mu/P	99.58
cd05076	274	PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of th	99.58
cd05084	252	PTKc_Fes Catalytic domain of the Protein Tyrosine	99.58
PLN00034	353	mitogen-activated protein kinase kinase; Provision	99.58
cd05624	331	STKc_MRCK_beta Catalytic domain of the Protein Ser	99.58
cd05068	261	PTKc_Frk_like Catalytic domain of Fyn-related kina	99.58
cd06644	292	STKc_STK10_LOK Catalytic domain of the Protein Ser	99.58
cd05053	293	PTKc_FGFR Catalytic domain of the Protein Tyrosine	99.58
KOG0574	502	consensus STE20-like serine/threonine kinase MST [	99.58
cd05582	318	STKc_RSK_N N-terminal catalytic domain of the Prot	99.58
KOG2052	513	consensus Activin A type IB receptor, serine/threo	99.58
cd05034	261	PTKc_Src_like Catalytic domain of Src kinase-like	99.58
cd05585	312	STKc_YPK1_like Catalytic domain of Yeast Protein K	99.58
cd05589	324	STKc_PKN Catalytic domain of the Protein Serine/Th	99.58
cd05033	266	PTKc_EphR Catalytic domain of Ephrin Receptor Prot	99.57
cd05067	260	PTKc_Lck_Blk Catalytic domain of the Protein Tyros	99.57
cd05105	400	PTKc_PDGFR_alpha Catalytic domain of the Protein T	99.57
cd07859	338	STKc_TDY_MAPK_plant Catalytic domain of the Serine	99.57
cd05588	329	STKc_aPKC Catalytic domain of the Protein Serine/T	99.57
cd06645	267	STKc_MAP4K3 Catalytic domain of the Protein Serine	99.57
cd05108	316	PTKc_EGFR Catalytic domain of the Protein Tyrosine	99.57
cd05081	284	PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of	99.57
KOG1989	738	consensus ARK protein kinase family [Signal transd	99.56
cd07873	301	STKc_PCTAIRE1 Catalytic domain of the Serine/Threo	99.56
cd05077	262	PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of th	99.56
cd05059	256	PTKc_Tec_like Catalytic domain of Tec-like Protein	99.56
cd05052	263	PTKc_Abl Catalytic domain of the Protein Tyrosine	99.56
cd06624	268	STKc_ASK Catalytic domain of the Protein Serine/Th	99.56
cd06619	279	PKc_MKK5 Catalytic domain of the dual-specificity	99.56
cd08224	267	STKc_Nek6_Nek7 Catalytic domain of the Protein Ser	99.56
cd06613	262	STKc_MAP4K3_like Catalytic domain of Mitogen-activ	99.56
cd07853	372	STKc_NLK Catalytic domain of the Serine/Threonine	99.56
cd05594	325	STKc_PKB_alpha Catalytic domain of the Protein Ser	99.56
KOG0658	364	consensus Glycogen synthase kinase-3 [Carbohydrate	99.56
cd05587	324	STKc_cPKC Catalytic domain of the Protein Serine/T	99.56
PTZ00266	1021	NIMA-related protein kinase; Provisional	99.56
cd05098	307	PTKc_FGFR1 Catalytic domain of the Protein Tyrosin	99.55
KOG0610	459	consensus Putative serine/threonine protein kinase	99.55
PHA03212	391	serine/threonine kinase US3; Provisional	99.55
cd05088	303	PTKc_Tie2 Catalytic domain of the Protein Tyrosine	99.55
cd07861	285	STKc_CDK1_euk Catalytic domain of the Serine/Threo	99.55
cd05608	280	STKc_GRK1 Catalytic domain of the Protein Serine/T	99.55
cd06630	268	STKc_MEKK1 Catalytic domain of the Protein Serine/	99.55
cd05580	290	STKc_PKA Catalytic domain of the Protein Serine/Th	99.55
PTZ00267	478	NIMA-related protein kinase; Provisional	99.55
cd05623	332	STKc_MRCK_alpha Catalytic domain of the Protein Se	99.55
PHA02988	283	hypothetical protein; Provisional	99.55
cd05584	323	STKc_p70S6K Catalytic domain of the Protein Serine	99.55
cd06654	296	STKc_PAK1 Catalytic domain of the Protein Serine/T	99.55
cd06656	297	STKc_PAK3 Catalytic domain of the Protein Serine/T	99.55
cd05066	267	PTKc_EphR_A Catalytic domain of the Protein Tyrosi	99.55
cd05065	269	PTKc_EphR_B Catalytic domain of the Protein Tyrosi	99.55
cd05616	323	STKc_cPKC_beta Catalytic domain of the Protein Ser	99.55
cd05101	304	PTKc_FGFR2 Catalytic domain of the Protein Tyrosin	99.55
cd06617	283	PKc_MKK3_6 Catalytic domain of the dual-specificit	99.55
cd05632	285	STKc_GRK5 Catalytic domain of the Protein Serine/T	99.55
KOG0586	596	consensus Serine/threonine protein kinase [General	99.54
cd07870	291	STKc_PFTAIRE2 Catalytic domain of the Serine/Threo	99.54
cd08219	255	STKc_Nek3 Catalytic domain of the Protein Serine/T	99.54
cd08227	327	PK_STRAD_alpha Pseudokinase domain of STE20-relate	99.54
cd05615	323	STKc_cPKC_alpha Catalytic domain of the Protein Se	99.54
cd07844	291	STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like	99.54
cd05107	401	PTKc_PDGFR_beta Catalytic domain of the Protein Ty	99.54
cd05100	334	PTKc_FGFR3 Catalytic domain of the Protein Tyrosin	99.54
cd07847	286	STKc_CDKL1_4 Catalytic domain of the Serine/Threon	99.54
cd05061	288	PTKc_InsR Catalytic domain of the Protein Tyrosine	99.54
cd05070	260	PTKc_Fyn_Yrk Catalytic domain of the Protein Tyros	99.54
cd05591	321	STKc_nPKC_epsilon Catalytic domain of the Protein	99.54
cd05614	332	STKc_MSK2_N N-terminal catalytic domain of the Pro	99.53
cd06631	265	STKc_YSK4 Catalytic domain of the Protein Serine/T	99.53
cd07846	286	STKc_CDKL2_3 Catalytic domain of the Serine/Threon	99.53
cd05618	329	STKc_aPKC_iota Catalytic domain of the Protein Ser	99.53
KOG0033	355	consensus Ca2+/calmodulin-dependent protein kinase	99.53
cd05590	320	STKc_nPKC_eta Catalytic domain of the Protein Seri	99.53
cd05048	283	PTKc_Ror Catalytic Domain of the Protein Tyrosine	99.53
cd05617	327	STKc_aPKC_zeta Catalytic domain of the Protein Ser	99.53
cd05071	262	PTKc_Src Catalytic domain of the Protein Tyrosine	99.53
cd05073	260	PTKc_Hck Catalytic domain of the Protein Tyrosine	99.53
cd05592	316	STKc_nPKC_theta_delta Catalytic domain of the Prot	99.53
cd07841	298	STKc_CDK7 Catalytic domain of the Serine/Threonine	99.53
cd07832	286	STKc_CCRK Catalytic domain of the Serine/Threonine	99.53
cd07860	284	STKc_CDK2_3 Catalytic domain of the Serine/Threoni	99.53
cd06643	282	STKc_SLK Catalytic domain of the Protein Serine/Th	99.53
KOG0201	467	consensus Serine/threonine protein kinase [Signal	99.53
cd06620	284	PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr	99.53
cd06655	296	STKc_PAK2 Catalytic domain of the Protein Serine/T	99.53
cd08229	267	STKc_Nek7 Catalytic domain of the Protein Serine/T	99.52
cd08218	256	STKc_Nek1 Catalytic domain of the Protein Serine/T	99.52
cd05570	318	STKc_PKC Catalytic domain of the Protein Serine/Th	99.52
cd05112	256	PTKc_Itk Catalytic domain of the Protein Tyrosine	99.52
cd05090	283	PTKc_Ror1 Catalytic domain of the Protein Tyrosine	99.52
cd05039	256	PTKc_Csk_like Catalytic domain of C-terminal Src k	99.52
cd05093	288	PTKc_TrkB Catalytic domain of the Protein Tyrosine	99.52
KOG0577	948	consensus Serine/threonine protein kinase [Signal	99.52
cd05604	325	STKc_SGK3 Catalytic domain of the Protein Serine/T	99.52
cd07839	284	STKc_CDK5 Catalytic domain of the Serine/Threonine	99.52
cd06647	293	STKc_PAK_I Catalytic domain of the Protein Serine/	99.52
cd06638	286	STKc_myosinIIIA Catalytic domain of the Protein Se	99.52
cd07836	284	STKc_Pho85 Catalytic domain of the Serine/Threonin	99.52
cd05050	288	PTKc_Musk Catalytic domain of the Protein Tyrosine	99.52
cd05063	268	PTKc_EphR_A2 Catalytic domain of the Protein Tyros	99.52
cd05630	285	STKc_GRK6 Catalytic domain of the Protein Serine/T	99.52
cd05609	305	STKc_MAST Catalytic domain of the Protein Serine/T	99.52
cd05055	302	PTKc_PDGFR Catalytic domain of the Protein Tyrosin	99.52
cd05049	280	PTKc_Trk Catalytic domain of the Protein Tyrosine	99.52
cd05578	258	STKc_Yank1 Catalytic domain of the Protein Serine/	99.52
PRK13184	932	pknD serine/threonine-protein kinase; Reviewed	99.52
cd08221	256	STKc_Nek9 Catalytic domain of the Protein Serine/T	99.51
cd08529	256	STKc_FA2-like Catalytic domain of the Protein Seri	99.51
cd05057	279	PTKc_EGFR_like Catalytic domain of Epidermal Growt	99.51
cd05094	291	PTKc_TrkC Catalytic domain of the Protein Tyrosine	99.51
cd05610	669	STKc_MASTL Catalytic domain of the Protein Serine/	99.51
cd05619	316	STKc_nPKC_theta Catalytic domain of the Protein Se	99.51
cd05099	314	PTKc_FGFR4 Catalytic domain of the Protein Tyrosin	99.51
KOG4279	1226	consensus Serine/threonine protein kinase [Signal	99.51
cd05046	275	PTK_CCK4 Pseudokinase domain of the Protein Tyrosi	99.51
PTZ00283	496	serine/threonine protein kinase; Provisional	99.51
cd05603	321	STKc_SGK2 Catalytic domain of the Protein Serine/T	99.51
cd05091	283	PTKc_Ror2 Catalytic domain of the Protein Tyrosine	99.51
cd05097	295	PTKc_DDR_like Catalytic domain of Discoidin Domain	99.51
PLN00009	294	cyclin-dependent kinase A; Provisional	99.51
cd05062	277	PTKc_IGF-1R Catalytic domain of the Protein Tyrosi	99.51
cd05085	250	PTKc_Fer Catalytic domain of the Protein Tyrosine	99.51
cd06626	264	STKc_MEKK4 Catalytic domain of the Protein Serine/	99.51
KOG3653	534	consensus Transforming growth factor beta/activin	99.51
cd05043	280	PTK_Ryk Pseudokinase domain of Ryk (Receptor relat	99.51
cd05575	323	STKc_SGK Catalytic domain of the Protein Serine/Th	99.51
PTZ00036	440	glycogen synthase kinase; Provisional	99.51
cd06632	258	STKc_MEKK1_plant Catalytic domain of the Protein S	99.51
cd06625	263	STKc_MEKK3_like Catalytic domain of MAP/ERK kinase	99.51
cd06612	256	STKc_MST1_2 Catalytic domain of the Protein Serine	99.5
cd05032	277	PTKc_InsR_like Catalytic domain of Insulin Recepto	99.5
cd06629	272	STKc_MAPKKK_Bck1_like Catalytic domain of fungal B	99.5
KOG0589	426	consensus Serine/threonine protein kinase [General	99.5
cd05095	296	PTKc_DDR2 Catalytic domain of the Protein Tyrosine	99.5
cd06622	286	PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS	99.5
cd05092	280	PTKc_TrkA Catalytic domain of the Protein Tyrosine	99.5
cd05620	316	STKc_nPKC_delta Catalytic domain of the Protein Se	99.5
cd07833	288	STKc_CDKL Catalytic domain of Cyclin-Dependent pro	99.5
cd05051	296	PTKc_DDR Catalytic domain of the Protein Tyrosine	99.5
cd08220	256	STKc_Nek8 Catalytic domain of the Protein Serine/T	99.5
cd08225	257	STKc_Nek5 Catalytic domain of the Protein Serine/T	99.5
cd06628	267	STKc_MAPKKK_Byr2_like Catalytic domain of fungal B	99.5
cd05069	260	PTKc_Yes Catalytic domain of the Protein Tyrosine	99.5
cd07862	290	STKc_CDK6 Catalytic domain of the Serine/Threonine	99.5
cd05035	273	PTKc_Axl_like Catalytic Domain of Axl-like Protein	99.49
cd07837	295	STKc_CdkB_plant Catalytic domain of the Serine/Thr	99.49
PF00069	260	Pkinase: Protein kinase domain Protein kinase; unc	99.49
cd06641	277	STKc_MST3 Catalytic domain of the Protein Serine/T	99.49
cd05109	279	PTKc_HER2 Catalytic domain of the Protein Tyrosine	99.49
cd07864	302	STKc_CDK12 Catalytic domain of the Serine/Threonin	99.49
cd06607	307	STKc_TAO Catalytic domain of the Protein Serine/Th	99.49
cd05103	343	PTKc_VEGFR2 Catalytic domain of the Protein Tyrosi	99.49
cd05036	277	PTKc_ALK_LTK Catalytic domain of the Protein Tyros	99.49
cd06637	272	STKc_TNIK Catalytic domain of the Protein Serine/T	99.49
cd05079	284	PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the	99.49
cd05089	297	PTKc_Tie1 Catalytic domain of the Protein Tyrosine	99.49
cd06652	265	STKc_MEKK2 Catalytic domain of the Protein Serine/	99.49
cd07876	359	STKc_JNK2 Catalytic domain of the Serine/Threonine	99.49
cd06609	274	STKc_MST3_like Catalytic domain of Mammalian Ste20	99.49
cd05574	316	STKc_phototropin_like Catalytic domain of Phototro	99.49
cd07843	293	STKc_CDC2L1 Catalytic domain of the Serine/Threoni	99.48
cd05607	277	STKc_GRK7 Catalytic domain of the Protein Serine/T	99.48
cd07842	316	STKc_CDK8_like Catalytic domain of Cyclin-Dependen	99.48
cd06651	266	STKc_MEKK3 Catalytic domain of the Protein Serine/	99.48
cd05078	258	PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain	99.48
PLN00113	968	leucine-rich repeat receptor-like protein kinase;	99.48
cd06623	264	PKc_MAPKK_plant_like Catalytic domain of Plant dua	99.48
cd06642	277	STKc_STK25-YSK1 Catalytic domain of the Protein Se	99.48
PHA03209	357	serine/threonine kinase US3; Provisional	99.48
cd05115	257	PTKc_Zap-70 Catalytic domain of the Protein Tyrosi	99.48
cd06621	287	PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek	99.48
KOG4250	732	consensus TANK binding protein kinase TBK1 [Signal	99.48
cd05041	251	PTKc_Fes_like Catalytic domain of Fes-like Protein	99.48
cd06659	297	STKc_PAK6 Catalytic domain of the Protein Serine/T	99.47
KOG1290	590	consensus Serine/threonine protein kinase [Signal	99.47
cd06640	277	STKc_MST4 Catalytic domain of the Protein Serine/T	99.47
cd06610	267	STKc_OSR1_SPAK Catalytic domain of the Protein Ser	99.47
cd07840	287	STKc_CDK9_like Catalytic domain of Cyclin-Dependen	99.47
cd06639	291	STKc_myosinIIIB Catalytic domain of the Protein Se	99.47
cd07865	310	STKc_CDK9 Catalytic domain of the Serine/Threonine	99.47
cd05111	279	PTK_HER3 Pseudokinase domain of the Protein Tyrosi	99.47
KOG0667	586	consensus Dual-specificity tyrosine-phosphorylatio	99.46
cd06653	264	STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kina	99.46
cd07863	288	STKc_CDK4 Catalytic domain of the Serine/Threonine	99.46
KOG0666	438	consensus Cyclin C-dependent kinase CDK8 [Transcri	99.46
KOG0599	411	consensus Phosphorylase kinase gamma subunit [Carb	99.46
cd05602	325	STKc_SGK1 Catalytic domain of the Protein Serine/T	99.46
cd05042	269	PTKc_Aatyk Catalytic domain of the Protein Tyrosin	99.46
cd05586	330	STKc_Sck1_like Catalytic domain of Suppressor of l	99.46
cd05037	259	PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the	99.46
cd05038	284	PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the P	99.46
cd05087	269	PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein	99.46
cd06605	265	PKc_MAPKK Catalytic domain of the dual-specificity	99.46
KOG0660	359	consensus Mitogen-activated protein kinase [Signal	99.46
cd05080	283	PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the	99.46
PHA03211	461	serine/threonine kinase US3; Provisional	99.46
KOG0576	829	consensus Mitogen-activated protein kinase kinase	99.46
cd06636	282	STKc_MAP4K4_6 Catalytic domain of the Protein Seri	99.46
cd06608	275	STKc_myosinIII_like Catalytic domain of Class III	99.46
cd07868	317	STKc_CDK8 Catalytic domain of the Serine/Threonine	99.46
cd08215	258	STKc_Nek Catalytic domain of the Protein Serine/Th	99.46
KOG0579	1187	consensus Ste20-like serine/threonine protein kina	99.45
cd05075	272	PTKc_Axl Catalytic domain of the Protein Tyrosine	99.45
cd05056	270	PTKc_FAK Catalytic domain of the Protein Tyrosine	99.45
cd05054	337	PTKc_VEGFR Catalytic domain of the Protein Tyrosin	99.45
cd07845	309	STKc_CDK10 Catalytic domain of the Serine/Threonin	99.45
cd07835	283	STKc_CDK1_like Catalytic domain of Cyclin-Dependen	99.45
cd07854	342	STKc_MAPK4_6 Catalytic domain of the Serine/Threon	99.45
cd06614	286	STKc_PAK Catalytic domain of the Protein Serine/Th	99.45
cd06917	277	STKc_NAK1_like Catalytic domain of Fungal Nak1-lik	99.45
cd07878	343	STKc_p38beta_MAPK11 Catalytic domain of the Serine	99.45
cd05110	303	PTKc_HER4 Catalytic domain of the Protein Tyrosine	99.45
PHA03207	392	serine/threonine kinase US3; Provisional	99.45
cd08217	265	STKc_Nek2 Catalytic domain of the Protein Serine/T	99.44
cd07880	343	STKc_p38gamma_MAPK12 Catalytic domain of the Serin	99.44
cd06658	292	STKc_PAK5 Catalytic domain of the Protein Serine/T	99.44
cd06627	254	STKc_Cdc7_like Catalytic domain of Cell division c	99.44
cd05572	262	STKc_cGK_PKG Catalytic domain of the Protein Serin	99.44
KOG4721	904	consensus Serine/threonine protein kinase, contain	99.44
cd07874	355	STKc_JNK3 Catalytic domain of the Serine/Threonine	99.44
cd05045	290	PTKc_RET Catalytic domain of the Protein Tyrosine	99.44
cd05047	270	PTKc_Tie Catalytic domain of Tie Protein Tyrosine	99.44
cd07856	328	STKc_Sty1_Hog1 Catalytic domain of the Serine/Thre	99.44
cd05613	290	STKc_MSK1_N N-terminal catalytic domain of the Pro	99.44
cd07831	282	STKc_MOK Catalytic domain of the Serine/Threonine	99.44
cd05082	256	PTKc_Csk Catalytic domain of the Protein Tyrosine	99.44
cd05581	280	STKc_PDK1 Catalytic domain of the Protein Serine/T	99.44
cd08223	257	STKc_Nek4 Catalytic domain of the Protein Serine/T	99.43
cd05086	268	PTKc_Aatyk2 Catalytic domain of the Protein Tyrosi	99.43
cd08530	256	STKc_CNK2-like Catalytic domain of the Protein Ser	99.43
cd00192	262	PTKc Catalytic domain of Protein Tyrosine Kinases.	99.43
cd06635	317	STKc_TAO1 Catalytic domain of the Protein Serine/T	99.43
cd07855	334	STKc_ERK5 Catalytic domain of the Serine/Threonine	99.43
cd05040	257	PTKc_Ack_like Catalytic domain of the Protein Tyro	99.43
cd06606	260	STKc_MAPKKK Catalytic domain of the Protein Serine	99.42
cd07849	336	STKc_ERK1_2_like Catalytic domain of Extracellular	99.42
smart00219	258	TyrKc Tyrosine kinase, catalytic domain. Phosphotr	99.42
cd06657	292	STKc_PAK4 Catalytic domain of the Protein Serine/T	99.42
cd07858	337	STKc_TEY_MAPK_plant Catalytic domain of the Serine	99.42
cd08226	328	PK_STRAD_beta Pseudokinase domain of STE20-related	99.42
cd05116	257	PTKc_Syk Catalytic domain of the Protein Tyrosine	99.42
cd05122	253	PKc_STE Catalytic domain of STE family Protein Kin	99.42
cd06648	285	STKc_PAK_II Catalytic domain of the Protein Serine	99.41
KOG4717	864	consensus Serine/threonine protein kinase [Signal	99.41
cd07866	311	STKc_BUR1 Catalytic domain of the Serine/Threonine	99.41
cd07875	364	STKc_JNK1 Catalytic domain of the Serine/Threonine	99.41
cd05577	277	STKc_GRK Catalytic domain of the Protein Serine/Th	99.41
cd06616	288	PKc_MKK4 Catalytic domain of the dual-specificity	99.41
cd07877	345	STKc_p38alpha_MAPK14 Catalytic domain of the Serin	99.4
cd05074	273	PTKc_Tyro3 Catalytic domain of the Protein Tyrosin	99.4
cd07867	317	STKc_CDC2L6 Catalytic domain of Serine/Threonine K	99.4
PTZ00284	467	protein kinase; Provisional	99.4
cd05579	265	STKc_MAST_like Catalytic domain of Microtubule-ass	99.4
PTZ00024	335	cyclin-dependent protein kinase; Provisional	99.39
KOG1152	772	consensus Signal transduction serine/threonine kin	99.39
cd05083	254	PTKc_Chk Catalytic domain of the Protein Tyrosine	99.39
KOG0587	953	consensus Traf2- and Nck-interacting kinase and re	99.39
cd06618	296	PKc_MKK7 Catalytic domain of the dual-specificity	99.39
KOG0690	516	consensus Serine/threonine protein kinase [Signal	99.38
cd07834	330	STKc_MAPK Catalytic domain of the Serine/Threonine	99.38
cd05583	288	STKc_MSK_N N-terminal catalytic domain of the Prot	99.38
cd05044	269	PTKc_c-ros Catalytic domain of the Protein Tyrosin	99.38
cd08528	269	STKc_Nek10 Catalytic domain of the Protein Serine/	99.38
KOG0200	609	consensus Fibroblast/platelet-derived growth facto	99.37
cd05060	257	PTKc_Syk_like Catalytic domain of Spleen Tyrosine	99.37
cd05118	283	STKc_CMGC Catalytic domain of CMGC family Serine/T	99.37
cd08222	260	STKc_Nek11 Catalytic domain of the Protein Serine/	99.37
cd06633	313	STKc_TAO3 Catalytic domain of the Protein Serine/T	99.36
KOG0984	282	consensus Mitogen-activated protein kinase (MAPK)	99.36
cd07829	282	STKc_CDK_like Catalytic domain of Cyclin-Dependent	99.36
cd07850	353	STKc_JNK Catalytic domain of the Serine/Threonine	99.36
KOG0668	338	consensus Casein kinase II, alpha subunit [Signal	99.35
cd05611	260	STKc_Rim15_like Catalytic domain of fungal Rim15-l	99.35
cd07838	287	STKc_CDK4_6_like Catalytic domain of Cyclin-Depend	99.35
cd07830	283	STKc_MAK_like Catalytic domain of Male germ cell-A	99.35
cd06634	308	STKc_TAO2 Catalytic domain of the Protein Serine/T	99.35
cd05058	262	PTKc_Met_Ron Catalytic domain of the Protein Tyros	99.35
cd05633	279	STKc_GRK3 Catalytic domain of the Protein Serine/T	99.34
cd07879	342	STKc_p38delta_MAPK13 Catalytic domain of the Serin	99.33
PHA03210	501	serine/threonine kinase US3; Provisional	99.33
cd05123	250	STKc_AGC Catalytic domain of AGC family Protein Se	99.32
cd07852	337	STKc_MAPK15 Catalytic domain of the Serine/Threoni	99.32
cd05606	278	STKc_beta_ARK Catalytic domain of the Protein Seri	99.31
cd07851	343	STKc_p38 Catalytic domain of the Serine/Threonine	99.3
PHA03390	267	pk1 serine/threonine-protein kinase 1; Provisional	99.3
KOG0695	593	consensus Serine/threonine protein kinase [Signal	99.29
cd07857	332	STKc_MPK1 Catalytic domain of the Serine/Threonine	99.28
cd08216	314	PK_STRAD Pseudokinase domain of STE20-related kina	99.28
KOG0612	1317	consensus Rho-associated, coiled-coil containing p	99.28
PRK09188	365	serine/threonine protein kinase; Provisional	99.28
KOG1151	775	consensus Tousled-like protein kinase [Signal tran	99.25
smart00221	225	STYKc Protein kinase; unclassified specificity. Ph	99.2
KOG0604	400	consensus MAP kinase-activated protein kinase 2 [S	99.2
KOG4645	1509	consensus MAPKKK (MAP kinase kinase kinase) SSK2 a	99.19
KOG0669	376	consensus Cyclin T-dependent kinase CDK9 [Cell cyc	99.19
KOG1006	361	consensus Mitogen-activated protein kinase (MAPK)	99.18
KOG0671	415	consensus LAMMER dual specificity kinases [Signal	99.17
KOG0983	391	consensus Mitogen-activated protein kinase (MAPK)	99.16
KOG0696	683	consensus Serine/threonine protein kinase [Signal	99.14
cd05147	190	RIO1_euk RIO kinase family; eukaryotic RIO1, catal	99.13
PLN03224	507	probable serine/threonine protein kinase; Provisio	99.12
KOG1345	378	consensus Serine/threonine kinase [Signal transduc	99.11
KOG0596	677	consensus Dual specificity; serine/threonine and t	99.11
KOG0664	449	consensus Nemo-like MAPK-related serine/threonine	99.09
cd05576	237	STKc_RPK118_like Catalytic domain of the Protein S	99.09
cd00180	215	PKc Catalytic domain of Protein Kinases. Protein K	99.09
KOG0195	448	consensus Integrin-linked kinase [Signal transduct	99.07
PRK10345	210	hypothetical protein; Provisional	99.04
PHA02882	294	putative serine/threonine kinase; Provisional	99.03
KOG1024	563	consensus Receptor-like protein tyrosine kinase RY	99.02
KOG0986	591	consensus G protein-coupled receptor kinase [Signa	99.02
cd05145	190	RIO1_like RIO kinase family; RIO1, RIO3 and simila	99.02
smart00220	244	S_TKc Serine/Threonine protein kinases, catalytic	98.96
KOG0608	1034	consensus Warts/lats-like serine threonine kinases	98.94
KOG0614	732	consensus cGMP-dependent protein kinase [Signal tr	98.88
KOG1164	322	consensus Casein kinase (serine/threonine/tyrosine	98.86
KOG1163	341	consensus Casein kinase (serine/threonine/tyrosine	98.85
KOG1167	418	consensus Serine/threonine protein kinase of the C	98.8
smart00090	237	RIO RIO-like kinase.	98.8
PRK14879	211	serine/threonine protein kinase; Provisional	98.79
KOG0670	752	consensus U4/U6-associated splicing factor PRP4 [R	98.78
KOG0603	612	consensus Ribosomal protein S6 kinase [Signal tran	98.78
KOG1165	449	consensus Casein kinase (serine/threonine/tyrosine	98.74
KOG1027	903	consensus Serine/threonine protein kinase and endo	98.71
PLN03225	566	Serine/threonine-protein kinase SNT7; Provisional	98.7
KOG1035	1351	consensus eIF-2alpha kinase GCN2 [Translation, rib	98.69
PRK09605	535	bifunctional UGMP family protein/serine/threonine	98.67
PRK10359	232	lipopolysaccharide core biosynthesis protein; Prov	98.63
TIGR03724	199	arch_bud32 Kae1-associated kinase Bud32. Members o	98.56
cd05144	198	RIO2_C RIO kinase family; RIO2, C-terminal catalyt	98.47
cd05120	155	APH_ChoK_like Aminoglycoside 3'-phosphotransferase	98.36
PRK12274	218	serine/threonine protein kinase; Provisional	98.28
KOG1166	974	consensus Mitotic checkpoint serine/threonine prot	98.25
COG0515	384	SPS1 Serine/threonine protein kinase [General func	98.24
cd05119	187	RIO RIO kinase family, catalytic domain. The RIO k	98.12
KOG3741	655	consensus Poly(A) ribonuclease subunit [RNA proces	98.03
cd05154	223	ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 an	97.96
KOG0665	369	consensus Jun-N-terminal kinase (JNK) [Signal tran	97.9
KOG1243	690	consensus Protein kinase [General function predict	97.66
TIGR01982	437	UbiB 2-polyprenylphenol 6-hydroxylase. This model	97.29
PRK04750	537	ubiB putative ubiquinone biosynthesis protein UbiB	97.26
PRK01723	239	3-deoxy-D-manno-octulosonic-acid kinase; Reviewed	97.04
KOG0603	612	consensus Ribosomal protein S6 kinase [Signal tran	96.81
cd05151	170	ChoK Choline Kinase (ChoK). The ChoK subfamily is	96.8
PF03109	119	ABC1: ABC1 family; InterPro: IPR004147 This entry	96.59
KOG0590	601	consensus Checkpoint kinase and related serine/thr	96.44
KOG1023	484	consensus Natriuretic peptide receptor, guanylate	96.44
KOG1240	1431	consensus Protein kinase containing WD40 repeats [	95.69
PLN02876	822	acyl-CoA dehydrogenase	95.6
KOG0601	524	consensus Cyclin-dependent kinase WEE1 [Cell cycle	95.56
cd05146	197	RIO3_euk RIO kinase family; eukaryotic RIO3, catal	95.25
PLN00181	793	protein SPA1-RELATED; Provisional	95.12
PF01636	239	APH: Phosphotransferase enzyme family This family	94.63
KOG1266	458	consensus Protein kinase [Signal transduction mech	94.24
COG0661	517	AarF Predicted unusual protein kinase [General fun	94.13
PF14531	288	Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_	94.06
COG2112	201	Predicted Ser/Thr protein kinase [Signal transduct	93.69
PRK10593	297	hypothetical protein; Provisional	93.59
PF13095	207	FTA2: Kinetochore Sim4 complex subunit FTA2	93.41
TIGR02172	226	Fb_sc_TIGR02172 Fibrobacter succinogenes paralogou	93.14
KOG0601	524	consensus Cyclin-dependent kinase WEE1 [Cell cycle	92.92
KOG3087	229	consensus Serine/threonine protein kinase [General	92.61
cd05150	244	APH Aminoglycoside 3'-phosphotransferase (APH). Th	92.4
KOG0590	601	consensus Checkpoint kinase and related serine/thr	92.19
KOG1033	516	consensus eIF-2alpha kinase PEK/EIF2AK3 [Translati	91.95
PF03881	288	Fructosamin_kin: Fructosamine kinase; InterPro: IP	86.23
PRK09550	401	mtnK methylthioribose kinase; Reviewed	85.16
KOG1035	1351	consensus eIF-2alpha kinase GCN2 [Translation, rib	83.3
PRK09902	216	hypothetical protein; Provisional	83.02

>KOG1187 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.91  E-value=2.4e-23  Score=154.09  Aligned_cols=136  Identities=49%  Similarity=0.750  Sum_probs=117.4

Q ss_pred             ccceechhhHHhhcCCeeecceecccCCeeEEEEEEcCCCEEEEEEeeccCccchhHHHHHHHHHhcccccCCCeeeeec
Q 039630           20 KFSKISYNELKIATNGFRTSNKIGEGGFGSVYKGRLEDGTVVAVNVLSVESKQGETEFMSEVASMANINICHENLVKLHG   99 (174)
Q Consensus        20 ~~~~~~~~~~~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~avK~~~~~~~~~~~~~~~e~~~l~~l~~~h~~i~~~~~   99 (174)
                      .+..|+++++..++++|.....||+|+||.||+|..+++..||||.+.........+|.+|+.++.+++  |+|+++++|
T Consensus        61 ~~~~fs~~el~~AT~~Fs~~~~ig~Ggfg~VYkG~l~~~~~vAVK~~~~~~~~~~~eF~~Ei~~ls~l~--H~Nlv~LlG  138 (361)
T KOG1187|consen   61 PLRSFSYDELRKATNNFSESNLIGEGGFGTVYKGVLSDGTVVAVKRLSSNSGQGEREFLNEVEILSRLR--HPNLVKLLG  138 (361)
T ss_pred             CcceeeHHHHHHHHhCCchhcceecCCCeEEEEEEECCCCEEEEEEecCCCCcchhHHHHHHHHHhcCC--CcCcccEEE
Confidence            567799999999999999999999999999999999988999999886543221455999999999999  999999999


Q ss_pred             ceecCCC-cccchhhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhccCCC
Q 039630          100 GCIDGPS-RILAPLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEIKTT  173 (174)
Q Consensus       100 ~~~~~~~-~~lv~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~~~~  173 (174)
                      +|.+.+. ..+||  +++.++.|...+...            ...  .++|..+++||.++|+||+|||..++|+
T Consensus       139 yC~e~~~~~~LVY--Eym~nGsL~d~L~~~------------~~~--~L~W~~R~kIa~g~A~gL~yLH~~~~~~  197 (361)
T KOG1187|consen  139 YCLEGGEHRLLVY--EYMPNGSLEDHLHGK------------KGE--PLDWETRLKIALGAARGLAYLHEGCPPP  197 (361)
T ss_pred             EEecCCceEEEEE--EccCCCCHHHHhCCC------------CCC--CCCHHHHHHHHHHHHHHHHHHccCCCCC
Confidence            9999884 99999  999999888755221            111  6899999999999999999999998876

>KOG0595 consensus Serine/threonine-protein kinase involved in autophagy [Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]

Probab=99.83  E-value=2.2e-20  Score=135.31  Aligned_cols=117  Identities=26%  Similarity=0.371  Sum_probs=102.0

Q ss_pred             CCeeecceecccCCeeEEEEE-EcCCCEEEEEEeecc--CccchhHHHHHHHHHhcccccCCCeeeeecceecCCCcccc
Q 039630           34 NGFRTSNKIGEGGFGSVYKGR-LEDGTVVAVNVLSVE--SKQGETEFMSEVASMANINICHENLVKLHGGCIDGPSRILA  110 (174)
Q Consensus        34 ~~~~~~~~lg~G~~g~V~~~~-~~~~~~~avK~~~~~--~~~~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~~~~~~~lv  110 (174)
                      .+|...+.||+|+|+.||+|. ..++..||||.+...  .++..+.+..|+.+|+.++  |+|||.+++++.+++..++|
T Consensus        10 ~~y~~~~~iG~GsfavVykg~h~~~~~~VAIK~i~~~~l~~k~~e~L~~Ei~iLkel~--H~nIV~l~d~~~~~~~i~lV   87 (429)
T KOG0595|consen   10 GDYELSREIGSGSFAVVYKGRHKKSGTEVAIKCIAKKKLNKKLVELLLSEIKILKELK--HPNIVRLLDCIEDDDFIYLV   87 (429)
T ss_pred             ccceehhhccCcceEEEEEeEeccCCceEEeeeehhhccCHHHHHHHHHHHHHHHhcC--CcceeeEEEEEecCCeEEEE
Confidence            568888999999999999999 667899999999766  5666778999999999999  99999999999999999999


Q ss_pred             hhhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhcc
Q 039630          111 PLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEI  170 (174)
Q Consensus       111 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  170 (174)
                      |  |++.+|.|..++                .++..+++..+..++.|+|.||++||++.
T Consensus        88 M--EyC~gGDLs~yi----------------~~~~~l~e~t~r~Fm~QLA~alq~L~~~~  129 (429)
T KOG0595|consen   88 M--EYCNGGDLSDYI----------------RRRGRLPEATARHFMQQLASALQFLHENN  129 (429)
T ss_pred             E--EeCCCCCHHHHH----------------HHcCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            8  888888887755                23346899999999999999999997753

>KOG0575 consensus Polo-like serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=99.81  E-value=2.5e-19  Score=135.43  Aligned_cols=117  Identities=24%  Similarity=0.357  Sum_probs=99.3

Q ss_pred             CCeeecceecccCCeeEEEEE-EcCCCEEEEEEeecc---CccchhHHHHHHHHHhcccccCCCeeeeecceecCCCccc
Q 039630           34 NGFRTSNKIGEGGFGSVYKGR-LEDGTVVAVNVLSVE---SKQGETEFMSEVASMANINICHENLVKLHGGCIDGPSRIL  109 (174)
Q Consensus        34 ~~~~~~~~lg~G~~g~V~~~~-~~~~~~~avK~~~~~---~~~~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~~~~~~~l  109 (174)
                      ..|...+.||+|+|+.+|.++ ..+|..||+|+++..   .....+.+.+|++|++.++  ||||++++++|.+.+..|+
T Consensus        18 ~~Y~~g~~LGkGgFA~cYe~~~~~tge~~A~KvVpk~~l~k~~~reKv~~EIeIHr~L~--HpnIV~f~~~FEDs~nVYi   95 (592)
T KOG0575|consen   18 KRYKRGRFLGKGGFARCYEARDLDTGEVVAVKVVPKKLLKKPKQREKVLNEIEIHRSLK--HPNIVQFYHFFEDSNNVYI   95 (592)
T ss_pred             ceeeeeeeeccCcceEEEEEEEcCCCcEEEEEEeehHHhcCcchHHHHHHHHHHHHhcC--CCcEEeeeeEeecCCceEE
Confidence            469999999999999999999 588999999999865   3455778999999999999  9999999999999988877


Q ss_pred             chhhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhcc
Q 039630          110 APLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEI  170 (174)
Q Consensus       110 v~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  170 (174)
                      +.  |.+..+.+...+                .++..++++.++.+..||+.||.|||++.
T Consensus        96 vL--ELC~~~sL~el~----------------Krrk~ltEpEary~l~QIv~GlkYLH~~~  138 (592)
T KOG0575|consen   96 VL--ELCHRGSLMELL----------------KRRKPLTEPEARYFLRQIVEGLKYLHSLG  138 (592)
T ss_pred             EE--EecCCccHHHHH----------------HhcCCCCcHHHHHHHHHHHHHHHHHHhcC
Confidence            77  555555554422                24457899999999999999999999864

>KOG0197 consensus Tyrosine kinases [Signal transduction mechanisms]

Probab=99.80  E-value=8.4e-20  Score=135.98  Aligned_cols=126  Identities=25%  Similarity=0.381  Sum_probs=108.2

Q ss_pred             hhhHHhhcCCeeecceecccCCeeEEEEEEcCCCEEEEEEeeccCccchhHHHHHHHHHhcccccCCCeeeeecceecCC
Q 039630           26 YNELKIATNGFRTSNKIGEGGFGSVYKGRLEDGTVVAVNVLSVESKQGETEFMSEVASMANINICHENLVKLHGGCIDGP  105 (174)
Q Consensus        26 ~~~~~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~avK~~~~~~~~~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~~~~  105 (174)
                      ...|.+....+..++.||+|.||.|+.|.+.....||+|.++.. ....+.|.+|+.+|++++  |++|++++++|..+.
T Consensus       198 ~d~wei~r~~l~l~~~LG~G~FG~V~~g~~~~~~~vavk~ik~~-~m~~~~f~~Ea~iMk~L~--H~~lV~l~gV~~~~~  274 (468)
T KOG0197|consen  198 RDPWEIPREELKLIRELGSGQFGEVWLGKWNGSTKVAVKTIKEG-SMSPEAFLREAQIMKKLR--HEKLVKLYGVCTKQE  274 (468)
T ss_pred             cCCeeecHHHHHHHHHhcCCccceEEEEEEcCCCcccceEEecc-ccChhHHHHHHHHHHhCc--ccCeEEEEEEEecCC
Confidence            55677777778889999999999999999987779999999744 456678999999999999  999999999999988


Q ss_pred             CcccchhhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhcc
Q 039630          106 SRILAPLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEI  170 (174)
Q Consensus       106 ~~~lv~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  170 (174)
                      ..++|+  |++..++|...+..              .....+...+.+.++.|||+||+||+++.
T Consensus       275 piyIVt--E~m~~GsLl~yLr~--------------~~~~~l~~~~Ll~~a~qIaeGM~YLes~~  323 (468)
T KOG0197|consen  275 PIYIVT--EYMPKGSLLDYLRT--------------REGGLLNLPQLLDFAAQIAEGMAYLESKN  323 (468)
T ss_pred             ceEEEE--EecccCcHHHHhhh--------------cCCCccchHHHHHHHHHHHHHHHHHHhCC
Confidence            899999  88999998886632              23445788999999999999999998753

>KOG0194 consensus Protein tyrosine kinase [Signal transduction mechanisms]

Probab=99.79  E-value=4.7e-19  Score=133.40  Aligned_cols=130  Identities=28%  Similarity=0.421  Sum_probs=107.9

Q ss_pred             ceechhhHHhhcCCeeecceecccCCeeEEEEEEcC--C---CEEEEEEeecc---CccchhHHHHHHHHHhcccccCCC
Q 039630           22 SKISYNELKIATNGFRTSNKIGEGGFGSVYKGRLED--G---TVVAVNVLSVE---SKQGETEFMSEVASMANINICHEN   93 (174)
Q Consensus        22 ~~~~~~~~~~~~~~~~~~~~lg~G~~g~V~~~~~~~--~---~~~avK~~~~~---~~~~~~~~~~e~~~l~~l~~~h~~   93 (174)
                      ..+.-+.|....++..+.++||+|+||.||+|.+..  +   ..||+|..+.+   ......++.+|+++|++++  |+|
T Consensus       145 ~PI~r~~Wel~H~~v~l~kkLGeGaFGeV~~G~l~~~~~~~~~~VAvK~~k~~~~~~~~~~~e~m~EArvMr~l~--H~N  222 (474)
T KOG0194|consen  145 RPIPRQKWELSHSDIELGKKLGEGAFGEVFKGKLKLKNGFKVVPVAVKTTKGSSELTKEQIKEFMKEARVMRQLN--HPN  222 (474)
T ss_pred             ccccccccEEeccCccccceeecccccEEEEEEEEecCCceeeeeEEEeecccccccHHHHHHHHHHHHHHHhCC--CCC
Confidence            356667788888888889999999999999999432  2   23899999863   3556778999999999999  999


Q ss_pred             eeeeecceecCCCcccchhhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhcc
Q 039630           94 LVKLHGGCIDGPSRILAPLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEI  170 (174)
Q Consensus        94 i~~~~~~~~~~~~~~lv~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  170 (174)
                      |++++|+.....+.++++  |.+.+|.|...+..               ....++..+...++.+.|.||+|||++.
T Consensus       223 VVr~yGVa~~~~Pl~ivm--El~~gGsL~~~L~k---------------~~~~v~~~ek~~~~~~AA~Gl~YLh~k~  282 (474)
T KOG0194|consen  223 VVRFYGVAVLEEPLMLVM--ELCNGGSLDDYLKK---------------NKKSLPTLEKLRFCYDAARGLEYLHSKN  282 (474)
T ss_pred             EEEEEEEEcCCCccEEEE--EecCCCcHHHHHHh---------------CCCCCCHHHHHHHHHHHHhHHHHHHHCC
Confidence            999999999999999988  88888888776622               2225889999999999999999999864

>KOG0192 consensus Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs [Signal transduction mechanisms]

Probab=99.79  E-value=4.5e-19  Score=131.00  Aligned_cols=125  Identities=31%  Similarity=0.501  Sum_probs=99.9

Q ss_pred             HHhhcCCeeecceecccCCeeEEEEEEcCCCEEEEEEeeccCc--cchhHHHHHHHHHhcccccCCCeeeeecceecCC-
Q 039630           29 LKIATNGFRTSNKIGEGGFGSVYKGRLEDGTVVAVNVLSVESK--QGETEFMSEVASMANINICHENLVKLHGGCIDGP-  105 (174)
Q Consensus        29 ~~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~avK~~~~~~~--~~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~~~~-  105 (174)
                      +.+....+...+.+|+|+||.||++.|+....||+|++.....  .....+.+|+.+|.+++  ||||++++|++..+. 
T Consensus        36 ~~i~~~~l~~~~~iG~G~~g~V~~~~~~g~~~vavK~~~~~~~~~~~~~~f~~E~~il~~l~--HpNIV~f~G~~~~~~~  113 (362)
T KOG0192|consen   36 EEIDPDELPIEEVLGSGSFGTVYKGKWRGTDVVAVKIISDPDFDDESRKAFRREASLLSRLR--HPNIVQFYGACTSPPG  113 (362)
T ss_pred             eecChHHhhhhhhcccCCceeEEEEEeCCceeEEEEEecchhcChHHHHHHHHHHHHHHhCC--CCCeeeEEEEEcCCCC
Confidence            3344445566677999999999999997444499999976532  22568999999999999  999999999999887 


Q ss_pred             CcccchhhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhccC
Q 039630          106 SRILAPLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEIK  171 (174)
Q Consensus       106 ~~~lv~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~~  171 (174)
                      ...+|+  |+++++.+...+..              .....+++..++.++.|||+||.|||++.+
T Consensus       114 ~~~iVt--Ey~~~GsL~~~l~~--------------~~~~~l~~~~~l~~aldiArGm~YLH~~~~  163 (362)
T KOG0192|consen  114 SLCIVT--EYMPGGSLSVLLHK--------------KRKRKLPLKVRLRIALDIARGMEYLHSEGP  163 (362)
T ss_pred             ceEEEE--EeCCCCcHHHHHhh--------------cccCCCCHHHHHHHHHHHHHHHHHHhcCCC
Confidence            677888  88888888774421              024568999999999999999999999875

>KOG1026 consensus Nerve growth factor receptor TRKA and related tyrosine kinases [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]

Probab=99.79  E-value=7.2e-20  Score=142.76  Aligned_cols=137  Identities=23%  Similarity=0.332  Sum_probs=110.5

Q ss_pred             hhHHhhcCCeeecceecccCCeeEEEEEE------cCCCEEEEEEeeccCcc-chhHHHHHHHHHhcccccCCCeeeeec
Q 039630           27 NELKIATNGFRTSNKIGEGGFGSVYKGRL------EDGTVVAVNVLSVESKQ-GETEFMSEVASMANINICHENLVKLHG   99 (174)
Q Consensus        27 ~~~~~~~~~~~~~~~lg~G~~g~V~~~~~------~~~~~~avK~~~~~~~~-~~~~~~~e~~~l~~l~~~h~~i~~~~~   99 (174)
                      ...++.+.+.+..+.||+|+||+||+|+.      ++...||||.++..... ..++|.+|++++..++  |+|||+++|
T Consensus       479 ~~~~i~r~~i~~~~eLGegaFGkVf~a~~~~l~p~~~~~lVAVK~LKd~a~~~~~~dF~REaeLla~l~--H~nIVrLlG  556 (774)
T KOG1026|consen  479 KVLEIPRSDIVFKEELGEGAFGKVFLAEAYGLLPGQDEQLVAVKALKDKAENQARQDFRREAELLAELQ--HPNIVRLLG  556 (774)
T ss_pred             ceeEechhheeehhhhcCchhhhhhhhhccCCCCCccceehhHhhhcccccHHHHHHHHHHHHHHHhcc--CCCeEEEEE
Confidence            34456677888999999999999999993      24569999999876444 6789999999999999  999999999


Q ss_pred             ceecCCCcccchhhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhc
Q 039630          100 GCIDGPSRILAPLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEE  169 (174)
Q Consensus       100 ~~~~~~~~~lv~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~  169 (174)
                      +|...++.++|+  ||+.++.|...+.-.+.-.........  ....++..+.+.+|.|||.||.||-++
T Consensus       557 VC~~~~P~~MvF--EYm~~GDL~eFLra~sP~a~~~~~g~~--~~~~L~~~q~L~iA~QIAaGM~YLs~~  622 (774)
T KOG1026|consen  557 VCREGDPLCMVF--EYMDHGDLHEFLRARSPKADKLASGQD--TPPPLSTSQFLHIATQIAAGMEYLSSH  622 (774)
T ss_pred             EEccCCeeEEEE--EecccccHHHHHHhhCCccccccCCCC--CCCCCCHHHHHHHHHHHHHHHHHHHhC
Confidence            999999999999  888999988877655544432222211  244588999999999999999999553

>KOG0600 consensus Cdc2-related protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=99.77  E-value=9.1e-19  Score=130.06  Aligned_cols=117  Identities=26%  Similarity=0.359  Sum_probs=94.2

Q ss_pred             CCeeecceecccCCeeEEEEE-EcCCCEEEEEEeeccC--ccchhHHHHHHHHHhcccccCCCeeeeecceecC--CCcc
Q 039630           34 NGFRTSNKIGEGGFGSVYKGR-LEDGTVVAVNVLSVES--KQGETEFMSEVASMANINICHENLVKLHGGCIDG--PSRI  108 (174)
Q Consensus        34 ~~~~~~~~lg~G~~g~V~~~~-~~~~~~~avK~~~~~~--~~~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~~~--~~~~  108 (174)
                      +.|+.+++||+|.||.||+++ ..+|..||+|.+....  .....-..+||.||++++  ||||+++.+.....  ...|
T Consensus       117 ~~feki~kIGeGTyg~VYkAr~~~tgkivALKKvr~d~~~~~~~~t~~REI~ILr~l~--HpNIikL~eivt~~~~~siY  194 (560)
T KOG0600|consen  117 DSFEKIEKIGEGTYGQVYKARDLETGKIVALKKVRFDNEKEGFPITAIREIKILRRLD--HPNIIKLEEIVTSKLSGSIY  194 (560)
T ss_pred             HHHHHHHHhcCcchhheeEeeecccCcEEEEEEeecccCCCcchHHHHHHHHHHHhcC--CCcccceeeEEEecCCceEE
Confidence            458889999999999999999 7889999999998764  445667889999999999  99999999999887  5677


Q ss_pred             cchhhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhcc
Q 039630          109 LAPLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEI  170 (174)
Q Consensus       109 lv~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  170 (174)
                      +||+|+..+..-|.                  ......+++.++..++.|++.||.|+|++.
T Consensus       195 lVFeYMdhDL~GLl------------------~~p~vkft~~qIKc~mkQLl~Gl~~cH~~g  238 (560)
T KOG0600|consen  195 LVFEYMDHDLSGLL------------------SSPGVKFTEPQIKCYMKQLLEGLEYCHSRG  238 (560)
T ss_pred             EEEecccchhhhhh------------------cCCCcccChHHHHHHHHHHHHHHHHHhhcC
Confidence            77733222222221                  123446899999999999999999999864

>KOG0615 consensus Serine/threonine protein kinase Chk2 and related proteins [Cell cycle control, cell division, chromosome partitioning]

Probab=99.77  E-value=3e-18  Score=124.61  Aligned_cols=118  Identities=17%  Similarity=0.244  Sum_probs=98.5

Q ss_pred             cCCeeecceecccCCeeEEEEE-EcCCCEEEEEEeeccCc---c----chhHHHHHHHHHhcccccCCCeeeeecceecC
Q 039630           33 TNGFRTSNKIGEGGFGSVYKGR-LEDGTVVAVNVLSVESK---Q----GETEFMSEVASMANINICHENLVKLHGGCIDG  104 (174)
Q Consensus        33 ~~~~~~~~~lg~G~~g~V~~~~-~~~~~~~avK~~~~~~~---~----~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~~~  104 (174)
                      .+.|.+.+.||.|+||.|-.|. .++|+.||+|++...-.   .    ....+.+|+++|++++  ||||+++.+++..+
T Consensus       171 ~d~yii~~~LGsGafg~Vkla~e~~tgk~vAiKIi~krk~~~~s~~~~~~~~v~~EieILkkL~--HP~IV~~~d~f~~~  248 (475)
T KOG0615|consen  171 NDYYIISKTLGSGAFGLVKLAYEKKTGKQVAIKIINKRKSTGCSRAIAKTRDVQNEIEILKKLS--HPNIVRIKDFFEVP  248 (475)
T ss_pred             cceeEeeeeecCCceeEEEEEEEcccCcEEEeeeeehhhcccccccccchhhhHHHHHHHHhcC--CCCEEEEeeeeecC
Confidence            3568889999999999999998 78899999999976511   1    2234689999999999  99999999999999


Q ss_pred             CCcccchhhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhcc
Q 039630          105 PSRILAPLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEI  170 (174)
Q Consensus       105 ~~~~lv~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  170 (174)
                      +..|+|+  |++++|.|+...-.                +..+.+..-..+++|++.|+.|||++.
T Consensus       249 ds~YmVl--E~v~GGeLfd~vv~----------------nk~l~ed~~K~~f~Qll~avkYLH~~G  296 (475)
T KOG0615|consen  249 DSSYMVL--EYVEGGELFDKVVA----------------NKYLREDLGKLLFKQLLTAVKYLHSQG  296 (475)
T ss_pred             CceEEEE--EEecCccHHHHHHh----------------ccccccchhHHHHHHHHHHHHHHHHcC
Confidence            9999999  99999999885532                234566666789999999999999865

>KOG0193 consensus Serine/threonine protein kinase RAF [Signal transduction mechanisms]

Probab=99.76  E-value=1.9e-18  Score=130.82  Aligned_cols=124  Identities=32%  Similarity=0.547  Sum_probs=99.8

Q ss_pred             echhhHHhhcCCeeecceecccCCeeEEEEEEcCCCEEEEEEeeccC--ccchhHHHHHHHHHhcccccCCCeeeeecce
Q 039630           24 ISYNELKIATNGFRTSNKIGEGGFGSVYKGRLEDGTVVAVNVLSVES--KQGETEFMSEVASMANINICHENLVKLHGGC  101 (174)
Q Consensus        24 ~~~~~~~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~avK~~~~~~--~~~~~~~~~e~~~l~~l~~~h~~i~~~~~~~  101 (174)
                      .+.++|.+..+.+.+...||+|.||+||+|.|..  .||||.+....  +...+.|.+|+.++++.+  |.||+-+.|+|
T Consensus       382 ~s~~~WeIp~~ev~l~~rIGsGsFGtV~Rg~whG--dVAVK~Lnv~~pt~~qlqaFKnEVa~lkkTR--H~NIlLFMG~~  457 (678)
T KOG0193|consen  382 DSLEEWEIPPEEVLLGERIGSGSFGTVYRGRWHG--DVAVKLLNVDDPTPEQLQAFKNEVAVLKKTR--HENILLFMGAC  457 (678)
T ss_pred             ccccccccCHHHhhccceeccccccceeeccccc--ceEEEEEecCCCCHHHHHHHHHHHHHHhhcc--hhhheeeehhh
Confidence            4457888888889999999999999999999864  39999998663  445778999999999999  99999999999


Q ss_pred             ecCCCcccchhhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhc
Q 039630          102 IDGPSRILAPLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEE  169 (174)
Q Consensus       102 ~~~~~~~lv~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~  169 (174)
                      ..++. .+|.  ...++-.|...+          .     ..+..+.....+.||.|||+||.|||.+
T Consensus       458 ~~p~~-AIiT--qwCeGsSLY~hl----------H-----v~etkfdm~~~idIAqQiaqGM~YLHAK  507 (678)
T KOG0193|consen  458 MNPPL-AIIT--QWCEGSSLYTHL----------H-----VQETKFDMNTTIDIAQQIAQGMDYLHAK  507 (678)
T ss_pred             cCCce-eeee--hhccCchhhhhc----------c-----chhhhhhHHHHHHHHHHHHHhhhhhhhh
Confidence            88765 4444  455555555422          1     1234678888999999999999999985

>KOG0581 consensus Mitogen-activated protein kinase kinase (MAP2K) [Signal transduction mechanisms]

Probab=99.73  E-value=2.9e-17  Score=118.03  Aligned_cols=115  Identities=21%  Similarity=0.291  Sum_probs=96.6

Q ss_pred             CCeeecceecccCCeeEEEEE-EcCCCEEEEEEeecc-CccchhHHHHHHHHHhcccccCCCeeeeecceecCCC-cccc
Q 039630           34 NGFRTSNKIGEGGFGSVYKGR-LEDGTVVAVNVLSVE-SKQGETEFMSEVASMANINICHENLVKLHGGCIDGPS-RILA  110 (174)
Q Consensus        34 ~~~~~~~~lg~G~~g~V~~~~-~~~~~~~avK~~~~~-~~~~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~~~~~-~~lv  110 (174)
                      .+++.+..||+|..|.|+++. ..+++.+|+|.+... .+....++.+|+.+++.++  +|+||.++|+|..... ..++
T Consensus        79 ~dle~~~~lG~G~gG~V~kv~Hk~t~~i~AlK~I~~~~~~~~~~Qi~rEl~il~~~~--spyIV~~ygaF~~~~~~isI~  156 (364)
T KOG0581|consen   79 SDLERLGVLGSGNGGTVYKVRHKPTGKIYALKVILLNIDPALQKQILRELEILRSCQ--SPYIVGFYGAFYSNGEEISIC  156 (364)
T ss_pred             HHhhhhhhcccCCCcEEEEEEEcCCCeEEEEEeecccCCHHHHHHHHHHHHHHhhCC--CCCeeeEeEEEEeCCceEEee
Confidence            357778999999999999999 778999999999655 3455778999999999998  9999999999999885 6666


Q ss_pred             hhhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhh
Q 039630          111 PLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHE  168 (174)
Q Consensus       111 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~  168 (174)
                      +  ||++++.|...+                ....++++..+..++.+|++||.|||+
T Consensus       157 m--EYMDgGSLd~~~----------------k~~g~i~E~~L~~ia~~VL~GL~YLh~  196 (364)
T KOG0581|consen  157 M--EYMDGGSLDDIL----------------KRVGRIPEPVLGKIARAVLRGLSYLHE  196 (364)
T ss_pred             h--hhcCCCCHHHHH----------------hhcCCCCHHHHHHHHHHHHHHHHHHhh
Confidence            6  777777776533                112458999999999999999999996

>KOG0591 consensus NIMA (never in mitosis)-related G2-specific serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=99.73  E-value=8.2e-19  Score=122.29  Aligned_cols=122  Identities=22%  Similarity=0.305  Sum_probs=92.9

Q ss_pred             CCeeecceecccCCeeEEEEE-EcCCCEEEEEEeecc--CccchhHHHHHHHHHhcccccCCCeeeeecceecCCC--cc
Q 039630           34 NGFRTSNKIGEGGFGSVYKGR-LEDGTVVAVNVLSVE--SKQGETEFMSEVASMANINICHENLVKLHGGCIDGPS--RI  108 (174)
Q Consensus        34 ~~~~~~~~lg~G~~g~V~~~~-~~~~~~~avK~~~~~--~~~~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~~~~~--~~  108 (174)
                      .+|.+.++||+|+||.||++. ..+|..+|.|.++-.  +....+.+..|+.+|++++  ||||+++++.....+.  ..
T Consensus        19 ~~y~Il~~IG~GsFg~vykv~~~~~g~l~a~K~i~f~~md~k~rq~~v~Ei~lLkQL~--HpNIVqYy~~~f~~~~evln   96 (375)
T KOG0591|consen   19 ADYQILKKIGRGSFGEVYKVQCLLDGKLVALKKIQFGMMDAKARQDCVKEISLLKQLN--HPNIVQYYAHSFIEDNEVLN   96 (375)
T ss_pred             HHHHHHHHHcCCcchheEEeeeccCcchhhhhhcchhhccHHHHHHHHHHHHHHHhcC--CchHHHHHHHhhhccchhhH
Confidence            357788999999999999998 788999999999844  3455778999999999999  9999999995444333  34


Q ss_pred             cchhhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhccC
Q 039630          109 LAPLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEIK  171 (174)
Q Consensus       109 lv~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~~  171 (174)
                      +++  ++.+.|.+..            +...-...+..+++..++.++.|+|.||.++|++.+
T Consensus        97 ivm--E~c~~GDLsq------------mIk~~K~qkr~ipE~~Vwk~f~QL~~AL~~cH~~~~  145 (375)
T KOG0591|consen   97 IVM--ELCDAGDLSQ------------MIKHFKKQKRLIPEKTVWKYFVQLCRALYHCHSKIP  145 (375)
T ss_pred             HHH--HhhcccCHHH------------HHHHHHhccccCchHHHHHHHHHHHHHHHHHhcccc
Confidence            444  5555554433            111112345578999999999999999999998544

>KOG0598 consensus Ribosomal protein S6 kinase and related proteins [General function prediction only; Signal transduction mechanisms]

Probab=99.73  E-value=1.4e-17  Score=119.56  Aligned_cols=117  Identities=25%  Similarity=0.303  Sum_probs=103.3

Q ss_pred             CCeeecceecccCCeeEEEEE-EcCCCEEEEEEeecc---CccchhHHHHHHHHHhcccccCCCeeeeecceecCCCccc
Q 039630           34 NGFRTSNKIGEGGFGSVYKGR-LEDGTVVAVNVLSVE---SKQGETEFMSEVASMANINICHENLVKLHGGCIDGPSRIL  109 (174)
Q Consensus        34 ~~~~~~~~lg~G~~g~V~~~~-~~~~~~~avK~~~~~---~~~~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~~~~~~~l  109 (174)
                      .+|.++++||+|+||+|+.++ ..+++.+|+|++++.   .....+....|..||..++  ||.|+++.-.|.+.+.+|+
T Consensus        25 ~dF~~lkviGkG~fGkV~~Vrk~dt~kiYAmKvl~K~~iv~~~e~~~~~~Er~IL~~v~--hPFiv~l~ysFQt~~kLyl  102 (357)
T KOG0598|consen   25 DDFEILKVIGKGSFGKVFQVRKKDTGKIYAMKVLKKKKIVEKKEVRHTKAERNILSKIK--HPFIVKLIYSFQTEEKLYL  102 (357)
T ss_pred             hheeeeeeeeccCCceEEEEEEcccCceeehhhhhhhHhhhhhhHHHHHHHHHHHHhCC--CCcEeeeEEecccCCeEEE
Confidence            578999999999999999999 667999999999866   3445777899999999999  9999999999999999999


Q ss_pred             chhhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhcc
Q 039630          110 APLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEI  170 (174)
Q Consensus       110 v~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  170 (174)
                      |.  ++..+|.|+..+.                +...+++..+..++..|+.||.|||+..
T Consensus       103 Vl--d~~~GGeLf~hL~----------------~eg~F~E~~arfYlaEi~lAL~~LH~~g  145 (357)
T KOG0598|consen  103 VL--DYLNGGELFYHLQ----------------REGRFSEDRARFYLAEIVLALGYLHSKG  145 (357)
T ss_pred             EE--eccCCccHHHHHH----------------hcCCcchhHHHHHHHHHHHHHHHHHhCC
Confidence            99  9999999998663                3346889999999999999999999864

>KOG0597 consensus Serine-threonine protein kinase FUSED [General function prediction only]

Probab=99.72  E-value=1.3e-17  Score=125.98  Aligned_cols=116  Identities=26%  Similarity=0.362  Sum_probs=96.7

Q ss_pred             CCeeecceecccCCeeEEEEE-EcCCCEEEEEEeeccC--ccchhHHHHHHHHHhcccccCCCeeeeecceecCCCcccc
Q 039630           34 NGFRTSNKIGEGGFGSVYKGR-LEDGTVVAVNVLSVES--KQGETEFMSEVASMANINICHENLVKLHGGCIDGPSRILA  110 (174)
Q Consensus        34 ~~~~~~~~lg~G~~g~V~~~~-~~~~~~~avK~~~~~~--~~~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~~~~~~~lv  110 (174)
                      ++|.+.+.||+|+||.||+|+ ..+.+.||+|++.+..  .++...+.+|++|++.++  ||||+.++++|.+..+.++|
T Consensus         2 e~yhv~e~iG~Gsfg~VYKgrrK~t~~~vAik~i~K~gr~~k~l~~l~~ev~i~r~lk--Hpniv~m~esfEt~~~~~vV   79 (808)
T KOG0597|consen    2 EQYHVYEMIGEGSFGRVYKGRRKYTIQVVAIKFIDKSGRNEKELKNLRQEVRILRSLK--HPNIVEMLESFETSAHLWVV   79 (808)
T ss_pred             cchhHHHHhcCCccceeeecccccceeEEEEEEehhcCCchHHHHHHHHHHHHHHhcC--CcchhhHHHhhcccceEEEE
Confidence            457778999999999999999 5578899999998663  445677999999999999  99999999999999999999


Q ss_pred             hhhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhcc
Q 039630          111 PLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEI  170 (174)
Q Consensus       111 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  170 (174)
                      .  ++..+ .+...+                .....+++..+..+++|++.||.|||++.
T Consensus        80 t--e~a~g-~L~~il----------------~~d~~lpEe~v~~~a~~LVsaL~yLhs~r  120 (808)
T KOG0597|consen   80 T--EYAVG-DLFTIL----------------EQDGKLPEEQVRAIAYDLVSALYYLHSNR  120 (808)
T ss_pred             e--hhhhh-hHHHHH----------------HhccCCCHHHHHHHHHHHHHHHHHHHhcC
Confidence            9  55444 444432                22345899999999999999999999864

>KOG0659 consensus Cdk activating kinase (CAK)/RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH/TFIIK, kinase subunit CDK7 [Cell cycle control, cell division, chromosome partitioning; Transcription; Replication, recombination and repair]

Probab=99.71  E-value=4.6e-17  Score=112.63  Aligned_cols=115  Identities=22%  Similarity=0.343  Sum_probs=93.1

Q ss_pred             CeeecceecccCCeeEEEEE-EcCCCEEEEEEeeccCcc--chhHHHHHHHHHhcccccCCCeeeeecceecCCCcccch
Q 039630           35 GFRTSNKIGEGGFGSVYKGR-LEDGTVVAVNVLSVESKQ--GETEFMSEVASMANINICHENLVKLHGGCIDGPSRILAP  111 (174)
Q Consensus        35 ~~~~~~~lg~G~~g~V~~~~-~~~~~~~avK~~~~~~~~--~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~~~~~~~lv~  111 (174)
                      .|...+++|+|.||.||+|. ..+|+.||+|.++.....  ......+|+..|+.++  |+||+.+.++|...+...+|+
T Consensus         3 rY~~~~~lGEG~~gvVyka~d~~t~~~VAIKKIkl~~~kdGi~~talREIK~Lqel~--h~nIi~LiD~F~~~~~l~lVf   80 (318)
T KOG0659|consen    3 RYEKLEKLGEGTYGVVYKARDTETGKRVAIKKIKLGNAKDGINRTALREIKLLQELK--HPNIIELIDVFPHKSNLSLVF   80 (318)
T ss_pred             hhhhhhhhcCcceEEEEEEEecCCCcEEEEEEeeccccccCccHHHHHHHHHHHHcc--CcchhhhhhhccCCCceEEEE
Confidence            57778999999999999999 788999999999876433  2456889999999999  999999999999999988888


Q ss_pred             hhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhc
Q 039630          112 LQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEE  169 (174)
Q Consensus       112 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~  169 (174)
                      ++...+.-..+                  ..+...++..++..++.+++.|++|+|++
T Consensus        81 Efm~tdLe~vI------------------kd~~i~l~pa~iK~y~~m~LkGl~y~H~~  120 (318)
T KOG0659|consen   81 EFMPTDLEVVI------------------KDKNIILSPADIKSYMLMTLKGLAYCHSK  120 (318)
T ss_pred             EeccccHHHHh------------------cccccccCHHHHHHHHHHHHHHHHHHHhh
Confidence            33322222222                  13344678899999999999999999875

>KOG0661 consensus MAPK related serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.71  E-value=9e-18  Score=124.09  Aligned_cols=118  Identities=27%  Similarity=0.338  Sum_probs=94.3

Q ss_pred             CCeeecceecccCCeeEEEEE-EcCCCEEEEEEeeccC-ccchhHHHHHHHHHhcccccCCCeeeeecceecCC-Ccccc
Q 039630           34 NGFRTSNKIGEGGFGSVYKGR-LEDGTVVAVNVLSVES-KQGETEFMSEVASMANINICHENLVKLHGGCIDGP-SRILA  110 (174)
Q Consensus        34 ~~~~~~~~lg~G~~g~V~~~~-~~~~~~~avK~~~~~~-~~~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~~~~-~~~lv  110 (174)
                      ++|.+++.||.|.||.||+|. ..++..||+|.++..- ..+...-++|+..|++++ .||||+++.+++.+.+ .+++|
T Consensus        10 ~RY~~i~klGDGTfGsV~la~~~~~~~~VAIK~MK~Kf~s~ee~~nLREvksL~kln-~hpniikL~Evi~d~~~~L~fV   88 (538)
T KOG0661|consen   10 DRYTVIRKLGDGTFGSVYLAKSKETGELVAIKKMKKKFYSWEECMNLREVKSLRKLN-PHPNIIKLKEVIRDNDRILYFV   88 (538)
T ss_pred             HHHHHHHHhcCCcceeEEEeeecCCCceeeHHHHHhhhccHHHHHHHHHHHHHHhcC-CCCcchhhHHHhhccCceEeee
Confidence            568899999999999999999 6778999999998652 223334578999999987 7999999999999988 78888


Q ss_pred             hhhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhcc
Q 039630          111 PLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEI  170 (174)
Q Consensus       111 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  170 (174)
                      +++.......|..                  .++..+++..+..|++||++||+|+|.+.
T Consensus        89 fE~Md~NLYqLmK------------------~R~r~fse~~irnim~QilqGL~hiHk~G  130 (538)
T KOG0661|consen   89 FEFMDCNLYQLMK------------------DRNRLFSESDIRNIMYQILQGLAHIHKHG  130 (538)
T ss_pred             HHhhhhhHHHHHh------------------hcCCcCCHHHHHHHHHHHHHHHHHHHhcC
Confidence            8444333333333                  23557899999999999999999998764

>KOG1094 consensus Discoidin domain receptor DDR1 [Signal transduction mechanisms]

Probab=99.70  E-value=7.1e-17  Score=122.27  Aligned_cols=121  Identities=26%  Similarity=0.386  Sum_probs=99.5

Q ss_pred             HhhcCCeeecceecccCCeeEEEEEEcCCCEEEEEEeeccCcc-chhHHHHHHHHHhcccccCCCeeeeecceecCCCcc
Q 039630           30 KIATNGFRTSNKIGEGGFGSVYKGRLEDGTVVAVNVLSVESKQ-GETEFMSEVASMANINICHENLVKLHGGCIDGPSRI  108 (174)
Q Consensus        30 ~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~avK~~~~~~~~-~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~~~~~~~  108 (174)
                      +.+++.+.++++||+|.||.|..|+...+..||||.++..... ...+|.+|+.+|.+++  ||||+.+.|+|..+++..
T Consensus       534 EfPRs~L~~~ekiGeGqFGEVhLCeveg~lkVAVK~Lr~~a~~~~r~~F~kEIkiLsqLk--hPNIveLvGVC~~DePic  611 (807)
T KOG1094|consen  534 EFPRSRLRFKEKIGEGQFGEVHLCEVEGPLKVAVKILRPDATKNARNDFLKEIKILSRLK--HPNIVELLGVCVQDDPLC  611 (807)
T ss_pred             hcchhheehhhhhcCcccceeEEEEecCceEEEEeecCcccchhHHHHHHHHHHHHhccC--CCCeeEEEeeeecCCchH
Confidence            3456678889999999999999999887899999999866433 4578999999999999  999999999999999999


Q ss_pred             cchhhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhh
Q 039630          109 LAPLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHE  168 (174)
Q Consensus       109 lv~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~  168 (174)
                      +++  ++++++.|...+.....              ..........+|.||+.||+||.+
T Consensus       612 mI~--EYmEnGDLnqFl~ahea--------------pt~~t~~~vsi~tqiasgmaYLes  655 (807)
T KOG1094|consen  612 MIT--EYMENGDLNQFLSAHEL--------------PTAETAPGVSICTQIASGMAYLES  655 (807)
T ss_pred             HHH--HHHhcCcHHHHHHhccC--------------cccccchhHHHHHHHHHHHHHHHh
Confidence            998  88899999886643210              112334456699999999999965

>KOG0593 consensus Predicted protein kinase KKIAMRE [General function prediction only]

Probab=99.70  E-value=2.7e-17  Score=115.78  Aligned_cols=115  Identities=19%  Similarity=0.251  Sum_probs=93.8

Q ss_pred             CeeecceecccCCeeEEEEE-EcCCCEEEEEEeeccC--ccchhHHHHHHHHHhcccccCCCeeeeecceecCCCcccch
Q 039630           35 GFRTSNKIGEGGFGSVYKGR-LEDGTVVAVNVLSVES--KQGETEFMSEVASMANINICHENLVKLHGGCIDGPSRILAP  111 (174)
Q Consensus        35 ~~~~~~~lg~G~~g~V~~~~-~~~~~~~avK~~~~~~--~~~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~~~~~~~lv~  111 (174)
                      .|+.+.++|+|+||.|++|+ ..+|+.||+|.+..+.  +....-..+|+.+|+++.  |+|++.+..+|......++||
T Consensus         3 kYE~LgkvGEGSYGvV~KCrnk~TgqIVAIKkF~Esedd~~VkKIAlREIrmLKqLk--H~NLVnLiEVFrrkrklhLVF   80 (396)
T KOG0593|consen    3 KYEKLGKVGEGSYGVVMKCRNKDTGQIVAIKKFVESEDDPVVKKIALREIRMLKQLK--HENLVNLIEVFRRKRKLHLVF   80 (396)
T ss_pred             HHhhhhccccCcceEEEEeccCCcccEEEEEeeccCCccHHHHHHHHHHHHHHHhcc--cchHHHHHHHHHhcceeEEEe
Confidence            46777899999999999999 7789999999996552  334566899999999999  999999999999999999999


Q ss_pred             hhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhc
Q 039630          112 LQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEE  169 (174)
Q Consensus       112 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~  169 (174)
                        |+++...|.. +..              .. .-++...+..+++|++.|+.|+|++
T Consensus        81 --E~~dhTvL~e-Le~--------------~p-~G~~~~~vk~~l~Q~l~ai~~cHk~  120 (396)
T KOG0593|consen   81 --EYCDHTVLHE-LER--------------YP-NGVPSELVKKYLYQLLKAIHFCHKN  120 (396)
T ss_pred             --eecchHHHHH-HHh--------------cc-CCCCHHHHHHHHHHHHHHhhhhhhc
Confidence              6666655433 210              01 1268888999999999999999875

>KOG0616 consensus cAMP-dependent protein kinase catalytic subunit (PKA) [Signal transduction mechanisms]

Probab=99.68  E-value=7.6e-17  Score=113.08  Aligned_cols=116  Identities=25%  Similarity=0.306  Sum_probs=102.1

Q ss_pred             CCeeecceecccCCeeEEEEE-EcCCCEEEEEEeecc---CccchhHHHHHHHHHhcccccCCCeeeeecceecCCCccc
Q 039630           34 NGFRTSNKIGEGGFGSVYKGR-LEDGTVVAVNVLSVE---SKQGETEFMSEVASMANINICHENLVKLHGGCIDGPSRIL  109 (174)
Q Consensus        34 ~~~~~~~~lg~G~~g~V~~~~-~~~~~~~avK~~~~~---~~~~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~~~~~~~l  109 (174)
                      ++|..++.||.|+||+|...+ ..+|.-+|+|+++..   ..+..+...+|..+|+.+.  ||.++++++.+.+.+.+++
T Consensus        44 ~dfe~~~tlGtGSFGrV~LVr~k~~g~yYAmKvL~k~~vVklKQveH~~nEk~vL~~v~--~PFlv~l~~t~~d~~~lym  121 (355)
T KOG0616|consen   44 QDFERLKTLGTGSFGRVHLVREKHSGNYYAMKVLDKQKVVKLKQVEHTHNEKRVLKAVS--HPFLVKLYGTFKDNSNLYM  121 (355)
T ss_pred             hhhhheeeeccCccceEEEEEEccCCceeehhhcCHHHHHHHHHHHHHhhHHHHHhhcc--CceeEEEEEeeccCCeEEE
Confidence            468888999999999999998 667889999999765   3455677889999999999  9999999999999999999


Q ss_pred             chhhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhc
Q 039630          110 APLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEE  169 (174)
Q Consensus       110 v~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~  169 (174)
                      ++  ++.+++.++..+                .+.++++++.+..+|.||+.||+|||++
T Consensus       122 vm--eyv~GGElFS~L----------------rk~~rF~e~~arFYAAeivlAleylH~~  163 (355)
T KOG0616|consen  122 VM--EYVPGGELFSYL----------------RKSGRFSEPHARFYAAEIVLALEYLHSL  163 (355)
T ss_pred             EE--eccCCccHHHHH----------------HhcCCCCchhHHHHHHHHHHHHHHHHhc
Confidence            99  999999998865                3345689999999999999999999985

>KOG0580 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=99.68  E-value=2.5e-17  Score=112.34  Aligned_cols=120  Identities=23%  Similarity=0.292  Sum_probs=101.8

Q ss_pred             CCeeecceecccCCeeEEEEE-EcCCCEEEEEEeeccC---ccchhHHHHHHHHHhcccccCCCeeeeecceecCCCccc
Q 039630           34 NGFRTSNKIGEGGFGSVYKGR-LEDGTVVAVNVLSVES---KQGETEFMSEVASMANINICHENLVKLHGGCIDGPSRIL  109 (174)
Q Consensus        34 ~~~~~~~~lg~G~~g~V~~~~-~~~~~~~avK~~~~~~---~~~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~~~~~~~l  109 (174)
                      ++|.+++.||+|.||.||.++ .+++-.||+|++.++.   ......+.+|++|-..+.  ||||++++++|.+....++
T Consensus        22 ~dfeigr~LgkgkFG~vYlarekks~~IvalKVlfKsqi~~~~v~~qlrREiEIqs~L~--hpnilrlY~~fhd~~riyL   99 (281)
T KOG0580|consen   22 DDFEIGRPLGKGKFGNVYLAREKKSLFIVALKVLFKSQILKTQVEHQLRREIEIQSHLR--HPNILRLYGYFHDSKRIYL   99 (281)
T ss_pred             hhccccccccCCccccEeEeeeccCCcEEEEeeeeHHHHHHhcchhhhhheeEeecccC--CccHHhhhhheeccceeEE
Confidence            468888999999999999999 6678899999997652   234567899999999999  9999999999999999999


Q ss_pred             chhhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhccC
Q 039630          110 APLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEIK  171 (174)
Q Consensus       110 v~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~~  171 (174)
                      +.  ++...+.++..++.+              ....+++.....+..|+|.||.|+|.+..
T Consensus       100 il--Eya~~gel~k~L~~~--------------~~~~f~e~~~a~Yi~q~A~Al~y~h~k~V  145 (281)
T KOG0580|consen  100 IL--EYAPRGELYKDLQEG--------------RMKRFDEQRAATYIKQLANALLYCHLKRV  145 (281)
T ss_pred             EE--EecCCchHHHHHHhc--------------ccccccccchhHHHHHHHHHHHHhccCCc
Confidence            99  888999999887532              23356777888899999999999988654

>cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

Probab=99.67  E-value=4.5e-16  Score=116.14  Aligned_cols=117  Identities=21%  Similarity=0.177  Sum_probs=96.2

Q ss_pred             CCeeecceecccCCeeEEEEE-EcCCCEEEEEEeeccC---ccchhHHHHHHHHHhcccccCCCeeeeecceecCCCccc
Q 039630           34 NGFRTSNKIGEGGFGSVYKGR-LEDGTVVAVNVLSVES---KQGETEFMSEVASMANINICHENLVKLHGGCIDGPSRIL  109 (174)
Q Consensus        34 ~~~~~~~~lg~G~~g~V~~~~-~~~~~~~avK~~~~~~---~~~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~~~~~~~l  109 (174)
                      ++|++.+.||+|+||.||++. ..+++.+|+|+++...   ......+.+|+.++..++  |+||+++++.+...+..++
T Consensus         1 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~--h~~iv~~~~~~~~~~~~~l   78 (364)
T cd05599           1 DDFESIKVIGRGAFGEVRLVQKKDTGHIYAMKKLRKSEMLEKEQVAHVRAERDILAEAD--NPWVVKLYYSFQDENYLYL   78 (364)
T ss_pred             CCceEEEEEEecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCC--CCCCcceEEEEEcCCeEEE
Confidence            368889999999999999999 4578999999997542   233456788999999999  9999999999999999888


Q ss_pred             chhhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhcc
Q 039630          110 APLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEI  170 (174)
Q Consensus       110 v~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  170 (174)
                      ++  ++.+++.+...+.                ....+++..+..++.|++.||+|||++.
T Consensus        79 v~--E~~~~g~L~~~l~----------------~~~~l~~~~~~~~~~qi~~aL~~lH~~~  121 (364)
T cd05599          79 IM--EYLPGGDMMTLLM----------------KKDTFTEEETRFYIAETILAIDSIHKLG  121 (364)
T ss_pred             EE--CCCCCcHHHHHHH----------------HcCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            88  7777777765432                1224788899999999999999999864

Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica

>PTZ00263 protein kinase A catalytic subunit; Provisional

Probab=99.65  E-value=9.6e-16  Score=113.00  Aligned_cols=117  Identities=17%  Similarity=0.231  Sum_probs=95.6

Q ss_pred             CCeeecceecccCCeeEEEEEE-cCCCEEEEEEeeccC---ccchhHHHHHHHHHhcccccCCCeeeeecceecCCCccc
Q 039630           34 NGFRTSNKIGEGGFGSVYKGRL-EDGTVVAVNVLSVES---KQGETEFMSEVASMANINICHENLVKLHGGCIDGPSRIL  109 (174)
Q Consensus        34 ~~~~~~~~lg~G~~g~V~~~~~-~~~~~~avK~~~~~~---~~~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~~~~~~~l  109 (174)
                      ++|.+.+.||+|+||.||++.. .+++.+|+|+++...   ......+.+|+.++..++  |+||+++++.+...+..++
T Consensus        18 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~--hp~iv~~~~~~~~~~~~~l   95 (329)
T PTZ00263         18 SDFEMGETLGTGSFGRVRIAKHKGTGEYYAIKCLKKREILKMKQVQHVAQEKSILMELS--HPFIVNMMCSFQDENRVYF   95 (329)
T ss_pred             hheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCC--CCCCCcEEEEEEcCCEEEE
Confidence            5789999999999999999994 568899999997542   233556889999999999  9999999999999988888


Q ss_pred             chhhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhcc
Q 039630          110 APLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEI  170 (174)
Q Consensus       110 v~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  170 (174)
                      ++  ++..++.+...+.                ....+++..+..++.|++.||+|||++.
T Consensus        96 v~--e~~~~~~L~~~l~----------------~~~~~~~~~~~~~~~qi~~aL~~LH~~~  138 (329)
T PTZ00263         96 LL--EFVVGGELFTHLR----------------KAGRFPNDVAKFYHAELVLAFEYLHSKD  138 (329)
T ss_pred             EE--cCCCCChHHHHHH----------------HcCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            88  7777776665432                1224678888889999999999999864

>cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10

Probab=99.65  E-value=8e-16  Score=110.10  Aligned_cols=119  Identities=21%  Similarity=0.347  Sum_probs=94.9

Q ss_pred             cCCeeecceecccCCeeEEEEEE----cCCCEEEEEEeeccC-ccchhHHHHHHHHHhcccccCCCeeeeecceecCCCc
Q 039630           33 TNGFRTSNKIGEGGFGSVYKGRL----EDGTVVAVNVLSVES-KQGETEFMSEVASMANINICHENLVKLHGGCIDGPSR  107 (174)
Q Consensus        33 ~~~~~~~~~lg~G~~g~V~~~~~----~~~~~~avK~~~~~~-~~~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~~~~~~  107 (174)
                      .++|++.+.||+|+||.||++..    ..+..+|+|.++... ......+.+|+.++..++  |+|++++++.+...+..
T Consensus         4 ~~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~e~~~l~~l~--h~~iv~~~~~~~~~~~~   81 (266)
T cd05064           4 NKSIKIERILGTGRFGELCRGCLKLPSKRELPVAIHTLRAGCSDKQRRGFLAEALTLGQFD--HSNIVRLEGVITRGNTM   81 (266)
T ss_pred             hHHeEEeeeecccCCCeEEEEEEecCCCceeeEEEEecCCCCCHHHHHHHHHHHHHHhcCC--CCCcCeEEEEEecCCCc
Confidence            45688999999999999999974    235689999997552 233456889999999998  99999999999988888


Q ss_pred             ccchhhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhcc
Q 039630          108 ILAPLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEI  170 (174)
Q Consensus       108 ~lv~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  170 (174)
                      ++++  ++.+++.+...+.               .....+++..++.++.|++.||+|||++.
T Consensus        82 ~lv~--e~~~~~~L~~~l~---------------~~~~~l~~~~~~~~~~~i~~al~~lH~~~  127 (266)
T cd05064          82 MIVT--EYMSNGALDSFLR---------------KHEGQLVAGQLMGMLPGLASGMKYLSEMG  127 (266)
T ss_pred             EEEE--EeCCCCcHHHHHH---------------hCCCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            8888  7777766654331               11235788999999999999999999754

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor

>cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

Probab=99.65  E-value=9.5e-16  Score=114.99  Aligned_cols=117  Identities=21%  Similarity=0.156  Sum_probs=94.9

Q ss_pred             CCeeecceecccCCeeEEEEE-EcCCCEEEEEEeeccC---ccchhHHHHHHHHHhcccccCCCeeeeecceecCCCccc
Q 039630           34 NGFRTSNKIGEGGFGSVYKGR-LEDGTVVAVNVLSVES---KQGETEFMSEVASMANINICHENLVKLHGGCIDGPSRIL  109 (174)
Q Consensus        34 ~~~~~~~~lg~G~~g~V~~~~-~~~~~~~avK~~~~~~---~~~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~~~~~~~l  109 (174)
                      ++|.+.+.||+|+||.||++. ..+++.+|+|++....   ......+.+|+.++..++  |+||+++++.+...+..++
T Consensus         1 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~--hp~iv~~~~~~~~~~~~~l   78 (377)
T cd05629           1 EDFHTVKVIGKGAFGEVRLVQKKDTGKIYAMKTLLKSEMFKKDQLAHVKAERDVLAESD--SPWVVSLYYSFQDAQYLYL   78 (377)
T ss_pred             CCceEeEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHHHHhHHHHHHHHHHHHHHhCC--CCCcceEEEEEEcCCeeEE
Confidence            368888999999999999998 5678899999986432   233456788999999998  9999999999999988888


Q ss_pred             chhhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhcc
Q 039630          110 APLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEI  170 (174)
Q Consensus       110 v~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  170 (174)
                      ++  ++.+++.+...+.                ....+++..+..++.|++.||+|||++.
T Consensus        79 v~--E~~~gg~L~~~l~----------------~~~~~~~~~~~~~~~ql~~aL~~LH~~g  121 (377)
T cd05629          79 IM--EFLPGGDLMTMLI----------------KYDTFSEDVTRFYMAECVLAIEAVHKLG  121 (377)
T ss_pred             EE--eCCCCCcHHHHHH----------------hcCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            88  7777777665331                1234678888889999999999999864

Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of

>cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2

Probab=99.65  E-value=1.2e-15  Score=114.70  Aligned_cols=116  Identities=17%  Similarity=0.160  Sum_probs=94.5

Q ss_pred             CeeecceecccCCeeEEEEE-EcCCCEEEEEEeeccC---ccchhHHHHHHHHHhcccccCCCeeeeecceecCCCcccc
Q 039630           35 GFRTSNKIGEGGFGSVYKGR-LEDGTVVAVNVLSVES---KQGETEFMSEVASMANINICHENLVKLHGGCIDGPSRILA  110 (174)
Q Consensus        35 ~~~~~~~lg~G~~g~V~~~~-~~~~~~~avK~~~~~~---~~~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~~~~~~~lv  110 (174)
                      .|+.++.||+|+||.||++. ..++..+|+|++....   ......+..|+.++..++  |+||+++++.+...+..+++
T Consensus         2 ~f~~~~~LG~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~l~--h~~iv~l~~~~~~~~~~~lv   79 (381)
T cd05626           2 MFVKIKTLGIGAFGEVCLACKVDTHALYAMKTLRKKDVLNRNQVAHVKAERDILAEAD--NEWVVKLYYSFQDKDNLYFV   79 (381)
T ss_pred             CceEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhcC--CCCeeeeEEEEecCCEEEEE
Confidence            57888999999999999998 5678899999997542   233456889999999999  99999999999999888888


Q ss_pred             hhhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhcc
Q 039630          111 PLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEI  170 (174)
Q Consensus       111 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  170 (174)
                      +  ++.+++.+...+.                ....+++..+..++.|++.||+|||++.
T Consensus        80 ~--E~~~gg~L~~~l~----------------~~~~~~e~~~~~~~~qi~~aL~~LH~~g  121 (381)
T cd05626          80 M--DYIPGGDMMSLLI----------------RMEVFPEVLARFYIAELTLAIESVHKMG  121 (381)
T ss_pred             E--ecCCCCcHHHHHH----------------hcCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            8  7777776655331                1224788888889999999999999753

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po

>cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor

Probab=99.65  E-value=1.4e-15  Score=114.11  Aligned_cols=117  Identities=19%  Similarity=0.160  Sum_probs=94.9

Q ss_pred             CCeeecceecccCCeeEEEEE-EcCCCEEEEEEeeccC---ccchhHHHHHHHHHhcccccCCCeeeeecceecCCCccc
Q 039630           34 NGFRTSNKIGEGGFGSVYKGR-LEDGTVVAVNVLSVES---KQGETEFMSEVASMANINICHENLVKLHGGCIDGPSRIL  109 (174)
Q Consensus        34 ~~~~~~~~lg~G~~g~V~~~~-~~~~~~~avK~~~~~~---~~~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~~~~~~~l  109 (174)
                      ++|++++.||+|+||.||++. ..+++.+|+|++....   ......+.+|+.++..++  |+||+++++.+...+..++
T Consensus         1 ~~y~~~~~lG~G~~g~V~~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~--h~~iv~~~~~~~~~~~~~l   78 (376)
T cd05598           1 SMFVKIKTIGIGAFGEVCLVRKVDTNALYAMKTLRKADVLMRNQAAHVKAERDILAEAD--NEWVVKLYYSFQDKDNLYF   78 (376)
T ss_pred             CCceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEcHHHHHhhhhHHHHHHHHHHHHhCC--CCCcceEEEEEEcCCEEEE
Confidence            368899999999999999998 5668999999996431   233456788999999999  9999999999999888888


Q ss_pred             chhhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhcc
Q 039630          110 APLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEI  170 (174)
Q Consensus       110 v~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  170 (174)
                      ++  ++.+++.+...+.                ....+++..+..++.||+.||+|||++.
T Consensus        79 v~--E~~~~g~L~~~i~----------------~~~~~~~~~~~~~~~qi~~al~~lH~~~  121 (376)
T cd05598          79 VM--DYIPGGDMMSLLI----------------RLGIFEEDLARFYIAELTCAIESVHKMG  121 (376)
T ss_pred             EE--eCCCCCcHHHHHH----------------hcCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            88  7777776665331                1224678888889999999999999854

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation.

>KOG1095 consensus Protein tyrosine kinase [Signal transduction mechanisms]

Probab=99.64  E-value=9.3e-16  Score=123.81  Aligned_cols=125  Identities=26%  Similarity=0.424  Sum_probs=100.4

Q ss_pred             hcCCeeecceecccCCeeEEEEEEcC--C----CEEEEEEeecc-CccchhHHHHHHHHHhcccccCCCeeeeecceecC
Q 039630           32 ATNGFRTSNKIGEGGFGSVYKGRLED--G----TVVAVNVLSVE-SKQGETEFMSEVASMANINICHENLVKLHGGCIDG  104 (174)
Q Consensus        32 ~~~~~~~~~~lg~G~~g~V~~~~~~~--~----~~~avK~~~~~-~~~~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~~~  104 (174)
                      .+......+.||+|+||.||.|...+  +    ..||+|.++.. .......|.+|..+|+.++  ||||++++|.+.+.
T Consensus       690 ~~~~v~l~~~lG~G~FG~VY~g~~~~~~~~~~~~~vaiK~l~~~~~~~~~~~Fl~Ea~~m~~f~--HpNiv~liGv~l~~  767 (1025)
T KOG1095|consen  690 PRKNVTLLRVLGKGAFGEVYEGTYSDVPGSVSPIQVAVKSLKRLSSEQEVSDFLKEALLMSKFD--HPNIVSLIGVCLDS  767 (1025)
T ss_pred             ChhheEeeeeeccccccceEEEEEecCCCCccceEEEEEeccccCCHHHHHHHHHHHHHHhcCC--CcceeeEEEeecCC
Confidence            35678888999999999999999542  2    24888888654 3456778999999999999  99999999999999


Q ss_pred             CCcccchhhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhc
Q 039630          105 PSRILAPLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEE  169 (174)
Q Consensus       105 ~~~~lv~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~  169 (174)
                      ...++++  ++++++.|...+......         ......+...+++.++.|||.||.||+++
T Consensus       768 ~~~~i~l--eyM~gGDL~sflr~~r~~---------~~~~~~L~~~dLl~~a~dvA~G~~YLe~~  821 (1025)
T KOG1095|consen  768 GPPLILL--EYMEGGDLLSFLRESRPA---------PFQPSNLSMRDLLAFALDVAKGMNYLESK  821 (1025)
T ss_pred             CCcEEEe--hhcccCcHHHHHHhcccc---------cCCCCCCCHHHHHHHHHHHhhhhHHHHhC
Confidence            9888888  888999988866432111         11123478899999999999999999875

>cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases

Probab=99.64  E-value=7.3e-16  Score=111.76  Aligned_cols=116  Identities=20%  Similarity=0.213  Sum_probs=94.1

Q ss_pred             CeeecceecccCCeeEEEEE-EcCCCEEEEEEeeccC---ccchhHHHHHHHHHhcccccCCCeeeeecceecCCCcccc
Q 039630           35 GFRTSNKIGEGGFGSVYKGR-LEDGTVVAVNVLSVES---KQGETEFMSEVASMANINICHENLVKLHGGCIDGPSRILA  110 (174)
Q Consensus        35 ~~~~~~~lg~G~~g~V~~~~-~~~~~~~avK~~~~~~---~~~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~~~~~~~lv  110 (174)
                      +|...+.||+|+||.||++. ..+++.+|+|+++...   ......+.+|+.+++.++  ||||+++++.+.+.+..+++
T Consensus         2 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~--hp~iv~~~~~~~~~~~~~lv   79 (291)
T cd05612           2 DLERIKTVGTGTFGRVHLVRDRISEHYYALKVMAIPEVIRLKQEQHVHNEKRVLKEVS--HPFIIRLFWTEHDQRFLYML   79 (291)
T ss_pred             CceeeeeeecCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhhHHHHHHHHHHHHHHhCC--CCcHhhhHhhhccCCeEEEE
Confidence            58888999999999999999 4578899999997542   233456888999999999  99999999999888888888


Q ss_pred             hhhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhcc
Q 039630          111 PLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEI  170 (174)
Q Consensus       111 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  170 (174)
                      +  ++..++.+...+.                ....+++.....++.|++.||+|||++.
T Consensus        80 ~--e~~~~~~L~~~~~----------------~~~~~~~~~~~~~~~qi~~~l~~lH~~~  121 (291)
T cd05612          80 M--EYVPGGELFSYLR----------------NSGRFSNSTGLFYASEIVCALEYLHSKE  121 (291)
T ss_pred             E--eCCCCCCHHHHHH----------------HcCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            8  7776666655331                1234788888899999999999999864

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt

>PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity

Probab=99.64  E-value=1.3e-15  Score=108.65  Aligned_cols=116  Identities=32%  Similarity=0.477  Sum_probs=90.8

Q ss_pred             eecceecccCCeeEEEEEEc-----CCCEEEEEEeeccC-ccchhHHHHHHHHHhcccccCCCeeeeecceecCCCcccc
Q 039630           37 RTSNKIGEGGFGSVYKGRLE-----DGTVVAVNVLSVES-KQGETEFMSEVASMANINICHENLVKLHGGCIDGPSRILA  110 (174)
Q Consensus        37 ~~~~~lg~G~~g~V~~~~~~-----~~~~~avK~~~~~~-~~~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~~~~~~~lv  110 (174)
                      ...+.||.|+||.||+|.+.     .+..|+||.++... ......+.+|+..+.+++  |+||++++|.+...+..+++
T Consensus         2 ~~~~~ig~G~fg~v~~~~~~~~~~~~~~~V~vk~~~~~~~~~~~~~~~~e~~~l~~l~--h~ni~~~~g~~~~~~~~~lv   79 (259)
T PF07714_consen    2 KLIKQIGEGSFGKVYRAEWKQKDNDKNQPVAVKILKPSSSEEEEEEFLNEIQILRKLR--HPNIVKLYGFCIENEPLFLV   79 (259)
T ss_dssp             EEEEEEEEESSEEEEEEEEESTTTSSEEEEEEEEESTTSSHHHHHHHHHHHHHHHTHS--BTTBE-EEEEEESSSSEEEE
T ss_pred             EEeeEEccCCCcEEEEEEEEcccCCCCEEEEEEEeccccccccceeeeeccccccccc--cccccccccccccccccccc
Confidence            45689999999999999965     35689999996542 334678999999999998  99999999999988888888


Q ss_pred             hhhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhcc
Q 039630          111 PLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEI  170 (174)
Q Consensus       111 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  170 (174)
                      +  ++...+.|...+...              ....+++..+..++.||+.||.|||++.
T Consensus        80 ~--e~~~~g~L~~~L~~~--------------~~~~~~~~~~~~i~~~i~~~l~~Lh~~~  123 (259)
T PF07714_consen   80 M--EYCPGGSLDDYLKSK--------------NKEPLSEQQRLSIAIQIAEALSYLHSNN  123 (259)
T ss_dssp             E--E--TTEBHHHHHHHT--------------CTTTSBHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             c--ccccccccccccccc--------------cccccccccccccccccccccccccccc
Confidence            8  777776666544211              1235788999999999999999999863

Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A ....

>KOG0583 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.64  E-value=2e-15  Score=112.38  Aligned_cols=120  Identities=16%  Similarity=0.235  Sum_probs=99.4

Q ss_pred             hcCCeeecceecccCCeeEEEEE-EcCCCEEEEEEeecc----Cc-cchhHHHHHHHHHhcccccCCCeeeeecceecCC
Q 039630           32 ATNGFRTSNKIGEGGFGSVYKGR-LEDGTVVAVNVLSVE----SK-QGETEFMSEVASMANINICHENLVKLHGGCIDGP  105 (174)
Q Consensus        32 ~~~~~~~~~~lg~G~~g~V~~~~-~~~~~~~avK~~~~~----~~-~~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~~~~  105 (174)
                      ..+.|.+.+.||+|+||+|+.|. ..++..||+|++...    .. ...+.+.+|+.+++.+. .||||++++.++....
T Consensus        15 ~~g~y~~~~~lG~GsfgkV~~a~~~~t~~~vAiKii~~~~~~~~~~~~~~~i~rEi~~~~~~~-~HpnI~~l~ev~~t~~   93 (370)
T KOG0583|consen   15 SIGKYELGRTLGSGSFGKVKLAKHRLTGEKVAIKIIDRKKVSSKSQKLDELIKREISILRRLR-SHPNIIRLLEVFATPT   93 (370)
T ss_pred             ccCceeeeeeecCCCCeeEEEeeeccCCCeEEEEEechhcccccccccchhhHHHHHHHHHhc-cCCCEeEEEEEEecCC
Confidence            34679999999999999999998 667899999988654    11 23445678999999986 6999999999999999


Q ss_pred             CcccchhhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhcc
Q 039630          106 SRILAPLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEI  170 (174)
Q Consensus       106 ~~~lv~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  170 (174)
                      ..++|+  ++..++.|+....                ...++.+..+..++.|++.|++|+|++.
T Consensus        94 ~~~ivm--Ey~~gGdL~~~i~----------------~~g~l~E~~ar~~F~Qlisav~y~H~~g  140 (370)
T KOG0583|consen   94 KIYIVM--EYCSGGDLFDYIV----------------NKGRLKEDEARKYFRQLISAVAYCHSRG  140 (370)
T ss_pred             eEEEEE--EecCCccHHHHHH----------------HcCCCChHHHHHHHHHHHHHHHHHHhCC
Confidence            998888  7777788877552                2456888999999999999999999974

>cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1

Probab=99.64  E-value=1.7e-15  Score=113.12  Aligned_cols=117  Identities=18%  Similarity=0.152  Sum_probs=95.4

Q ss_pred             CCeeecceecccCCeeEEEEE-EcCCCEEEEEEeeccC---ccchhHHHHHHHHHhcccccCCCeeeeecceecCCCccc
Q 039630           34 NGFRTSNKIGEGGFGSVYKGR-LEDGTVVAVNVLSVES---KQGETEFMSEVASMANINICHENLVKLHGGCIDGPSRIL  109 (174)
Q Consensus        34 ~~~~~~~~lg~G~~g~V~~~~-~~~~~~~avK~~~~~~---~~~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~~~~~~~l  109 (174)
                      ++|+..+.||+|+||.||++. ..+++.+|+|+++...   ......+..|+.++..++  |++|+++++.+...+..++
T Consensus         1 ~~y~~~~~LG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~~~--~~~iv~~~~~~~~~~~~~l   78 (363)
T cd05628           1 EDFESLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVGHIRAERDILVEAD--SLWVVKMFYSFQDKLNLYL   78 (363)
T ss_pred             CCceEeEEEEeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHhCC--CCCcceEEEEEecCCeEEE
Confidence            368889999999999999998 5568899999997542   223456788999999998  9999999999999888888


Q ss_pred             chhhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhcc
Q 039630          110 APLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEI  170 (174)
Q Consensus       110 v~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  170 (174)
                      ++  ++.+++.+...+.                ....+++..+..++.|++.||+|||++.
T Consensus        79 v~--E~~~gg~L~~~l~----------------~~~~l~~~~~~~~~~qi~~aL~~lH~~g  121 (363)
T cd05628          79 IM--EFLPGGDMMTLLM----------------KKDTLTEEETQFYIAETVLAIDSIHQLG  121 (363)
T ss_pred             EE--cCCCCCcHHHHHH----------------hcCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            88  7777777665431                1235788899999999999999999863

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus

>cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase

Probab=99.64  E-value=3.2e-15  Score=108.23  Aligned_cols=117  Identities=23%  Similarity=0.330  Sum_probs=91.3

Q ss_pred             CCeeecceecccCCeeEEEEE-EcCCCEEEEEEeeccC-ccchhHHHHHHHHHhcccccCCCeeeeecceecCCCcccch
Q 039630           34 NGFRTSNKIGEGGFGSVYKGR-LEDGTVVAVNVLSVES-KQGETEFMSEVASMANINICHENLVKLHGGCIDGPSRILAP  111 (174)
Q Consensus        34 ~~~~~~~~lg~G~~g~V~~~~-~~~~~~~avK~~~~~~-~~~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~~~~~~~lv~  111 (174)
                      ++|...+.||+|+||.||+|. ..++..+|+|.++... ......+.+|+.+++.++  |+||+++++.+...+..++++
T Consensus         5 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~--h~niv~~~~~~~~~~~~~lv~   82 (288)
T cd07871           5 ETYVKLDKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEGAPCTAIREVSLLKNLK--HANIVTLHDIIHTERCLTLVF   82 (288)
T ss_pred             ccceEeeEEecCCCEEEEEEEECCCCCEEEEEEecccccCCcchhHHHHHHHHHhCC--CCCEeeEEEEEcCCCeEEEEE
Confidence            468889999999999999998 4578899999997553 233456788999999999  999999999998888778887


Q ss_pred             hhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhcc
Q 039630          112 LQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEI  170 (174)
Q Consensus       112 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  170 (174)
                        ++.++ .+...+.               .....+++..+..++.|++.||+|||++.
T Consensus        83 --e~~~~-~l~~~l~---------------~~~~~~~~~~~~~~~~qi~~aL~~LH~~~  123 (288)
T cd07871          83 --EYLDS-DLKQYLD---------------NCGNLMSMHNVKIFMFQLLRGLSYCHKRK  123 (288)
T ss_pred             --eCCCc-CHHHHHH---------------hcCCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence              55443 3333221               11223678888999999999999999864

Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament

>cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit

Probab=99.64  E-value=1.7e-15  Score=113.57  Aligned_cols=95  Identities=24%  Similarity=0.369  Sum_probs=76.4

Q ss_pred             hHHhhcCCeeecceecccCCeeEEEEEE------cCCCEEEEEEeeccC-ccchhHHHHHHHHHhcc-cccCCCeeeeec
Q 039630           28 ELKIATNGFRTSNKIGEGGFGSVYKGRL------EDGTVVAVNVLSVES-KQGETEFMSEVASMANI-NICHENLVKLHG   99 (174)
Q Consensus        28 ~~~~~~~~~~~~~~lg~G~~g~V~~~~~------~~~~~~avK~~~~~~-~~~~~~~~~e~~~l~~l-~~~h~~i~~~~~   99 (174)
                      +|....++|.+.+.||+|+||.||+|.+      .++..||+|+++... ......+.+|+.++..+ +  ||||+++++
T Consensus        29 ~~~~~~~~~~~~~~LG~G~fG~V~~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~Ei~il~~l~~--HpnIv~l~~  106 (375)
T cd05104          29 KWEFPRNRLSFGKTLGAGAFGKVVEATAYGLFKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGN--HINIVNLLG  106 (375)
T ss_pred             ccccchHHeehhheecCCccceEEEEEEeccccCccceeEEEEeccCCcCcHHHHHHHHHHHHHHHhcC--Ccceeeeee
Confidence            4555667899999999999999999973      235689999997442 33455788999999999 6  999999999


Q ss_pred             ceecCCCcccchhhhhhhhhhhhhhhh
Q 039630          100 GCIDGPSRILAPLQASIEALFLFTKLW  126 (174)
Q Consensus       100 ~~~~~~~~~lv~~~~~~~~~~l~~~~~  126 (174)
                      .+...+..++++  ++.+++.|...+.
T Consensus       107 ~~~~~~~~~lv~--E~~~~g~L~~~l~  131 (375)
T cd05104         107 ACTVGGPTLVIT--EYCCYGDLLNFLR  131 (375)
T ss_pred             eeccCCcceeee--hhccCCcHHHHHH
Confidence            999999988888  7877777766553

Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce

>KOG0198 consensus MEKK and related serine/threonine protein kinases [Signal transduction mechanisms]

Probab=99.64  E-value=1.9e-15  Score=109.20  Aligned_cols=118  Identities=22%  Similarity=0.304  Sum_probs=90.7

Q ss_pred             CCeeecceecccCCeeEEEEE-EcCCCEEEEEEeeccCccchhHHHHHHHHHhcccccCCCeeeeecceecCCC--cccc
Q 039630           34 NGFRTSNKIGEGGFGSVYKGR-LEDGTVVAVNVLSVESKQGETEFMSEVASMANINICHENLVKLHGGCIDGPS--RILA  110 (174)
Q Consensus        34 ~~~~~~~~lg~G~~g~V~~~~-~~~~~~~avK~~~~~~~~~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~~~~~--~~lv  110 (174)
                      .++...+.||+|+||.||.+. .++|..+|||.+........+.+.+|+.+|.+++  |+|||+++|.....+.  .+++
T Consensus        17 ~~~~~~~~lG~Gs~G~V~l~~~~~~g~~~AvK~v~~~~~~~~~~l~~Ei~iL~~l~--~p~IV~~~G~~~~~~~~~~~i~   94 (313)
T KOG0198|consen   17 SNWSKGKLLGRGSFGSVYLATNKKTGELMAVKSVELEDSPTSESLEREIRILSRLN--HPNIVQYYGSSSSRENDEYNIF   94 (313)
T ss_pred             chhhhhccccCccceEEEEEEecCCCcceeeeeeecccchhHHHHHHHHHHHHhCC--CCCEEeeCCccccccCeeeEee
Confidence            346667999999999999999 4558999999998663333667899999999999  9999999998655543  4444


Q ss_pred             hhhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhcc
Q 039630          111 PLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEI  170 (174)
Q Consensus       111 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  170 (174)
                      +  ++..++.+.....               .....+++..+..++.||++||.|||++.
T Consensus        95 m--Ey~~~GsL~~~~~---------------~~g~~l~E~~v~~ytr~iL~GL~ylHs~g  137 (313)
T KOG0198|consen   95 M--EYAPGGSLSDLIK---------------RYGGKLPEPLVRRYTRQILEGLAYLHSKG  137 (313)
T ss_pred             e--eccCCCcHHHHHH---------------HcCCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            4  6666666555331               11115899999999999999999999753

>KOG0662 consensus Cyclin-dependent kinase CDK5 [Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]

Probab=99.63  E-value=1.7e-15  Score=99.86  Aligned_cols=115  Identities=23%  Similarity=0.358  Sum_probs=90.2

Q ss_pred             eeecceecccCCeeEEEEE-EcCCCEEEEEEeeccC--ccchhHHHHHHHHHhcccccCCCeeeeecceecCCCcccchh
Q 039630           36 FRTSNKIGEGGFGSVYKGR-LEDGTVVAVNVLSVES--KQGETEFMSEVASMANINICHENLVKLHGGCIDGPSRILAPL  112 (174)
Q Consensus        36 ~~~~~~lg~G~~g~V~~~~-~~~~~~~avK~~~~~~--~~~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~~~~~~~lv~~  112 (174)
                      |.-.++||+|.||+|++++ +.+++.||+|.++...  ........+|+.+++.+.  |.||+++++....+....+|++
T Consensus         4 ydkmekigegtygtvfkarn~~t~eivalkrvrlddddegvpssalreicllkelk--hknivrl~dvlhsdkkltlvfe   81 (292)
T KOG0662|consen    4 YDKMEKIGEGTYGTVFKARNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELK--HKNIVRLHDVLHSDKKLTLVFE   81 (292)
T ss_pred             hHHHHhhcCCcceeeEecccCCccceEEEEEEeccCCCCCCcHHHHHHHHHHHHhh--hcceeehhhhhccCceeEEeHH
Confidence            4556899999999999999 7889999999998663  334667899999999999  9999999999999888888883


Q ss_pred             hhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhcc
Q 039630          113 QASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEI  170 (174)
Q Consensus       113 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  170 (174)
                      +.....--.+.                  .-++.++......++.|+++||.+.|++.
T Consensus        82 ~cdqdlkkyfd------------------slng~~d~~~~rsfmlqllrgl~fchshn  121 (292)
T KOG0662|consen   82 FCDQDLKKYFD------------------SLNGDLDPEIVRSFMLQLLRGLGFCHSHN  121 (292)
T ss_pred             HhhHHHHHHHH------------------hcCCcCCHHHHHHHHHHHHhhhhhhhhhh
Confidence            32222111111                  12234777888899999999999998754

>cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1

Probab=99.63  E-value=4.2e-15  Score=108.31  Aligned_cols=135  Identities=21%  Similarity=0.265  Sum_probs=95.9

Q ss_pred             hcCCeeecceecccCCeeEEEEEEc-----------------CCCEEEEEEeeccC-ccchhHHHHHHHHHhcccccCCC
Q 039630           32 ATNGFRTSNKIGEGGFGSVYKGRLE-----------------DGTVVAVNVLSVES-KQGETEFMSEVASMANINICHEN   93 (174)
Q Consensus        32 ~~~~~~~~~~lg~G~~g~V~~~~~~-----------------~~~~~avK~~~~~~-~~~~~~~~~e~~~l~~l~~~h~~   93 (174)
                      ..++|.+.+.||+|+||.||+|...                 ++..+|+|++.... ......+.+|+.++..++  |+|
T Consensus         3 ~~~~~~~~~~lg~G~fg~V~~~~~~~~~~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~--h~n   80 (304)
T cd05096           3 PRGHLLFKEKLGEGQFGEVHLCEVVNPQDLPTLQFPFNVRKGRPLLVAVKILRPDANKNARNDFLKEVKILSRLK--DPN   80 (304)
T ss_pred             chhhCeeeeEecccCCeEEEEEEeccCcccccccccccccCCcceEEEEEEecCCCCHHHHHHHHHHHHHHhhcC--CCC
Confidence            3457888999999999999999742                 23479999987543 233557889999999999  999


Q ss_pred             eeeeecceecCCCcccchhhhhhhhhhhhhhhhcccceeeeeee---cCCCCCcccCCHHHHHHHHHHHHHHHHHhhhcc
Q 039630           94 LVKLHGGCIDGPSRILAPLQASIEALFLFTKLWKMDKFISIYVV---SGSKKNRVKFNWIARREIALGIARGLAYIHEEI  170 (174)
Q Consensus        94 i~~~~~~~~~~~~~~lv~~~~~~~~~~l~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  170 (174)
                      |+++++.+...+..++++  ++..++.+...+............   .........+++..+..++.|++.||.|||++.
T Consensus        81 iv~~~~~~~~~~~~~lv~--e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~  158 (304)
T cd05096          81 IIRLLGVCVDEDPLCMIT--EYMENGDLNQFLSSHHLDDKEENGNDAVPPAHCLPAISYSSLLHVALQIASGMKYLSSLN  158 (304)
T ss_pred             eeEEEEEEecCCceEEEE--ecCCCCcHHHHHHhccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHCC
Confidence            999999999988888888  777766665533221100000000   000112234778888999999999999999864

Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k

>cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1

Probab=99.63  E-value=2.2e-15  Score=113.19  Aligned_cols=116  Identities=17%  Similarity=0.152  Sum_probs=94.3

Q ss_pred             CeeecceecccCCeeEEEEE-EcCCCEEEEEEeeccC---ccchhHHHHHHHHHhcccccCCCeeeeecceecCCCcccc
Q 039630           35 GFRTSNKIGEGGFGSVYKGR-LEDGTVVAVNVLSVES---KQGETEFMSEVASMANINICHENLVKLHGGCIDGPSRILA  110 (174)
Q Consensus        35 ~~~~~~~lg~G~~g~V~~~~-~~~~~~~avK~~~~~~---~~~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~~~~~~~lv  110 (174)
                      .|..++.||+|+||.||++. ..+++.+|+|++....   ......+..|+.++..++  |+||+++++.+...+..++|
T Consensus         2 ~f~~~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~~~--h~~iv~~~~~~~~~~~~~lv   79 (382)
T cd05625           2 MFVKIKTLGIGAFGEVCLARKVDTKALYAMKTLRKKDVLLRNQVAHVKAERDILAEAD--NEWVVRLYYSFQDKDNLYFV   79 (382)
T ss_pred             CcEEEEEEEeCCCEEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhCC--CCcCCeEEEEEEeCCEEEEE
Confidence            47888999999999999998 5678899999997542   233456888999999999  99999999999999888888


Q ss_pred             hhhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhcc
Q 039630          111 PLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEI  170 (174)
Q Consensus       111 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  170 (174)
                      +  ++.+++.+...+.                ....+++..+..++.|++.||+|||++.
T Consensus        80 ~--E~~~gg~L~~~l~----------------~~~~~~e~~~~~~~~qi~~al~~lH~~~  121 (382)
T cd05625          80 M--DYIPGGDMMSLLI----------------RMGIFPEDLARFYIAELTCAVESVHKMG  121 (382)
T ss_pred             E--eCCCCCcHHHHHH----------------hcCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            8  7777766655331                1224678888889999999999999864

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an

>KOG0611 consensus Predicted serine/threonine protein kinase [General function prediction only]

Probab=99.63  E-value=2.9e-16  Score=114.82  Aligned_cols=118  Identities=15%  Similarity=0.251  Sum_probs=101.0

Q ss_pred             CCeeecceecccCCeeEEEEE-EcCCCEEEEEEeeccCc---cchhHHHHHHHHHhcccccCCCeeeeecceecCCCccc
Q 039630           34 NGFRTSNKIGEGGFGSVYKGR-LEDGTVVAVNVLSVESK---QGETEFMSEVASMANINICHENLVKLHGGCIDGPSRIL  109 (174)
Q Consensus        34 ~~~~~~~~lg~G~~g~V~~~~-~~~~~~~avK~~~~~~~---~~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~~~~~~~l  109 (174)
                      ..|++.+.||.|.||+|-++. ...|+.||+|.+++..-   .+.-.+.+|++||..++  ||||+.++.+|...+...+
T Consensus        53 HRyE~~etLGkGTYGKVk~A~e~~sgR~VAiKsIrKdkIkdeqDlvhIRREIeIMSsLN--HPhII~IyEVFENkdKIvi  130 (668)
T KOG0611|consen   53 HRYEITETLGKGTYGKVKLAYEHKSGREVAIKSIRKDKIKDEQDLVHIRREIEIMSSLN--HPHIIQIYEVFENKDKIVI  130 (668)
T ss_pred             hHHHHHHHhcCCcccceeehhhccCCcEeehhhhhhhhcccHHHHHHHHHHHHHHhhcC--CCceeehhhhhcCCceEEE
Confidence            468889999999999999988 56799999999986632   33446899999999999  9999999999999999988


Q ss_pred             chhhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhccC
Q 039630          110 APLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEIK  171 (174)
Q Consensus       110 v~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~~  171 (174)
                      ||  +|...+.|..+.                .++..+++.....|++||+.|+.|+|.+-.
T Consensus       131 vM--EYaS~GeLYDYi----------------Ser~~LsErEaRhfFRQIvSAVhYCHknrV  174 (668)
T KOG0611|consen  131 VM--EYASGGELYDYI----------------SERGSLSEREARHFFRQIVSAVHYCHKNRV  174 (668)
T ss_pred             EE--EecCCccHHHHH----------------HHhccccHHHHHHHHHHHHHHHHHHhhccc
Confidence            88  888888887754                345568999999999999999999998643

>cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases

Probab=99.62  E-value=2.5e-15  Score=110.88  Aligned_cols=117  Identities=21%  Similarity=0.200  Sum_probs=95.0

Q ss_pred             CCeeecceecccCCeeEEEEEE-cCCCEEEEEEeeccC---ccchhHHHHHHHHHhcccccCCCeeeeecceecCCCccc
Q 039630           34 NGFRTSNKIGEGGFGSVYKGRL-EDGTVVAVNVLSVES---KQGETEFMSEVASMANINICHENLVKLHGGCIDGPSRIL  109 (174)
Q Consensus        34 ~~~~~~~~lg~G~~g~V~~~~~-~~~~~~avK~~~~~~---~~~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~~~~~~~l  109 (174)
                      ++|.+.+.||+|+||.||++.. .++..||+|+++...   ......+..|+.++..++  |+||+++++.+...+..++
T Consensus         1 ~~y~~~~~ig~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~--h~~iv~~~~~~~~~~~~~l   78 (333)
T cd05600           1 KDFQILTQVGQGGYGQVFLAKKKDTGEIVALKRMKKSLLFKLNEVRHVLTERDILTTTK--SEWLVKLLYAFQDDEYLYL   78 (333)
T ss_pred             CCcEEEEEEeecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhCC--CCCCccEEEEEEcCCEEEE
Confidence            3688899999999999999994 468899999997542   233456888999999999  9999999999999888888


Q ss_pred             chhhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhcc
Q 039630          110 APLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEI  170 (174)
Q Consensus       110 v~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  170 (174)
                      ++  ++.+++.+...+.                ....+++..+..++.|++.||.|||++.
T Consensus        79 v~--e~~~g~~L~~~l~----------------~~~~l~~~~~~~~~~qi~~~l~~lH~~~  121 (333)
T cd05600          79 AM--EYVPGGDFRTLLN----------------NLGVLSEDHARFYMAEMFEAVDALHELG  121 (333)
T ss_pred             EE--eCCCCCCHHHHHH----------------HcCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            88  7777776655331                1234788888899999999999999754

Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis.

>KOG0663 consensus Protein kinase PITSLRE and related kinases [General function prediction only]

Probab=99.62  E-value=2.6e-15  Score=107.13  Aligned_cols=116  Identities=20%  Similarity=0.308  Sum_probs=89.8

Q ss_pred             CCeeecceecccCCeeEEEEE-EcCCCEEEEEEeeccCc--cchhHHHHHHHHHhcccccCCCeeeeecceecC--CCcc
Q 039630           34 NGFRTSNKIGEGGFGSVYKGR-LEDGTVVAVNVLSVESK--QGETEFMSEVASMANINICHENLVKLHGGCIDG--PSRI  108 (174)
Q Consensus        34 ~~~~~~~~lg~G~~g~V~~~~-~~~~~~~avK~~~~~~~--~~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~~~--~~~~  108 (174)
                      +.|+.+..|++|+||.||+|. .+++..||+|.++-...  .-.-..++||.+|.+++  ||||+.+-.+.+..  +..|
T Consensus        76 ~efe~lnrI~EGtyGiVYRakdk~t~eIVALKr~kmekek~GFPItsLREIniLl~~~--H~NIV~vkEVVvG~~~d~iy  153 (419)
T KOG0663|consen   76 EEFEKLNRIEEGTYGVVYRAKDKKTDEIVALKRLKMEKEKEGFPITSLREINILLKAR--HPNIVEVKEVVVGSNMDKIY  153 (419)
T ss_pred             HHHHHHhhcccCcceeEEEeccCCcceeEEeeecccccccCCCcchhHHHHHHHHhcC--CCCeeeeEEEEeccccceee
Confidence            357888999999999999999 77899999999985521  22335689999999999  99999998887654  5677


Q ss_pred             cchhhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhc
Q 039630          109 LAPLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEE  169 (174)
Q Consensus       109 lv~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~  169 (174)
                      +||++.-.+.-.+..                  .-..++....+..++.|++.|++|||++
T Consensus       154 ~VMe~~EhDLksl~d------------------~m~q~F~~~evK~L~~QlL~glk~lH~~  196 (419)
T KOG0663|consen  154 IVMEYVEHDLKSLME------------------TMKQPFLPGEVKTLMLQLLRGLKHLHDN  196 (419)
T ss_pred             eeHHHHHhhHHHHHH------------------hccCCCchHHHHHHHHHHHHHHHHHhhc
Confidence            777443333333333                  1224678888899999999999999975

>cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase

Probab=99.62  E-value=4e-15  Score=105.83  Aligned_cols=117  Identities=21%  Similarity=0.354  Sum_probs=94.5

Q ss_pred             CCeeecceecccCCeeEEEEEEcCCCEEEEEEeeccCccchhHHHHHHHHHhcccccCCCeeeeecceecCCCcccchhh
Q 039630           34 NGFRTSNKIGEGGFGSVYKGRLEDGTVVAVNVLSVESKQGETEFMSEVASMANINICHENLVKLHGGCIDGPSRILAPLQ  113 (174)
Q Consensus        34 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~avK~~~~~~~~~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~~~~~~~lv~~~  113 (174)
                      ++|...+.||+|+||.||++.+.++..+|+|.++.. ......+..|+.+++.++  |+|++++++.+...+..++++  
T Consensus         4 ~~~~~~~~lg~G~~~~vy~~~~~~~~~~a~K~~~~~-~~~~~~~~~e~~~l~~l~--h~~i~~~~~~~~~~~~~~iv~--   78 (256)
T cd05114           4 SELTFMKELGSGQFGVVHLGKWRAQIKVAIKAINEG-AMSEEDFIEEAKVMMKLS--HPKLVQLYGVCTQQKPLYIVT--   78 (256)
T ss_pred             HHcEEeeEecCCcCceEEEEEeccCceEEEEecccC-CccHHHHHHHHHHHHHCC--CCCceeEEEEEccCCCEEEEE--
Confidence            457778999999999999999877778999988633 334567889999999999  999999999998888888888  


Q ss_pred             hhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhcc
Q 039630          114 ASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEI  170 (174)
Q Consensus       114 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  170 (174)
                      ++.+++.+...+.               .....+++..+..++.|++.||+|||++.
T Consensus        79 e~~~~~~L~~~~~---------------~~~~~~~~~~~~~~~~~i~~~l~~lH~~~  120 (256)
T cd05114          79 EFMENGCLLNYLR---------------QRQGKLSKDMLLSMCQDVCEGMEYLERNS  120 (256)
T ss_pred             EcCCCCcHHHHHH---------------hCccCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            7777666655331               11124788889999999999999999865

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h

>cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase

Probab=99.62  E-value=5e-15  Score=107.94  Aligned_cols=118  Identities=23%  Similarity=0.374  Sum_probs=91.6

Q ss_pred             cCCeeecceecccCCeeEEEEE-EcCCCEEEEEEeeccC-ccchhHHHHHHHHHhcccccCCCeeeeecceecCCCcccc
Q 039630           33 TNGFRTSNKIGEGGFGSVYKGR-LEDGTVVAVNVLSVES-KQGETEFMSEVASMANINICHENLVKLHGGCIDGPSRILA  110 (174)
Q Consensus        33 ~~~~~~~~~lg~G~~g~V~~~~-~~~~~~~avK~~~~~~-~~~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~~~~~~~lv  110 (174)
                      .++|.+.+.||+|+||.||++. ..++..+|+|+++... ......+.+|+.+++.++  |+|++++++.+...+..+++
T Consensus         4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~--h~niv~~~~~~~~~~~~~lv   81 (303)
T cd07869           4 ADSYEKLEKLGEGSYATVYKGKSKVNGKLVALKVIRLQEEEGTPFTAIREASLLKGLK--HANIVLLHDIIHTKETLTLV   81 (303)
T ss_pred             cccceEeeeEEecCCEEEEEEEECCCCCEEEEEEeccccccccchhHHHHHHHHhhCC--CCCcCeEEEEEecCCeEEEE
Confidence            3679999999999999999999 4478899999997543 223345778999999999  99999999999998888888


Q ss_pred             hhhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhcc
Q 039630          111 PLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEI  170 (174)
Q Consensus       111 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  170 (174)
                      +  ++... .+...+.               .....++...+..++.|++.||+|||++.
T Consensus        82 ~--e~~~~-~l~~~~~---------------~~~~~~~~~~~~~~~~qi~~al~~lH~~~  123 (303)
T cd07869          82 F--EYVHT-DLCQYMD---------------KHPGGLHPENVKLFLFQLLRGLSYIHQRY  123 (303)
T ss_pred             E--ECCCc-CHHHHHH---------------hCCCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            8  55432 3322221               11224677888899999999999999864

Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an

>KOG4278 consensus Protein tyrosine kinase [Signal transduction mechanisms]

Probab=99.61  E-value=6.5e-16  Score=118.34  Aligned_cols=123  Identities=26%  Similarity=0.391  Sum_probs=106.5

Q ss_pred             hhHHhhcCCeeecceecccCCeeEEEEEEc-CCCEEEEEEeeccCccchhHHHHHHHHHhcccccCCCeeeeecceecCC
Q 039630           27 NELKIATNGFRTSNKIGEGGFGSVYKGRLE-DGTVVAVNVLSVESKQGETEFMSEVASMANINICHENLVKLHGGCIDGP  105 (174)
Q Consensus        27 ~~~~~~~~~~~~~~~lg~G~~g~V~~~~~~-~~~~~avK~~~~~~~~~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~~~~  105 (174)
                      ++|+..+.++....+||-|.||.||.|.|+ -...||||.++. +.....+|+.|+.+|+.+.  |||+++++|+|..+.
T Consensus       260 DkWEmeRtdItMkhKLGGGQYGeVYeGvWKkyslTvAVKtLKE-DtMeveEFLkEAAvMKeik--HpNLVqLLGVCT~Ep  336 (1157)
T KOG4278|consen  260 DKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKE-DTMEVEEFLKEAAVMKEIK--HPNLVQLLGVCTHEP  336 (1157)
T ss_pred             chhhccchheeeeeccCCCcccceeeeeeeccceeeehhhhhh-cchhHHHHHHHHHHHHhhc--CccHHHHhhhhccCC
Confidence            689999999999999999999999999964 477899999973 3567889999999999999  999999999999999


Q ss_pred             CcccchhhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhh
Q 039630          106 SRILAPLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHE  168 (174)
Q Consensus       106 ~~~lv~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~  168 (174)
                      .+|++.  +++..+.|+.++..              .++..++...++.++.||+.||.||..
T Consensus       337 PFYIiT--EfM~yGNLLdYLRe--------------cnr~ev~avvLlyMAtQIsSaMeYLEk  383 (1157)
T KOG4278|consen  337 PFYIIT--EFMCYGNLLDYLRE--------------CNRSEVPAVVLLYMATQISSAMEYLEK  383 (1157)
T ss_pred             CeEEEE--ecccCccHHHHHHH--------------hchhhcchhHHHHHHHHHHHHHHHHHH
Confidence            999999  88888888876622              233457888889999999999999954

>KOG0582 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.61  E-value=4.1e-15  Score=109.52  Aligned_cols=127  Identities=19%  Similarity=0.286  Sum_probs=104.0

Q ss_pred             hhHHhhcCCeeecceecccCCeeEEEEE-EcCCCEEEEEEeeccC-ccchhHHHHHHHHHhcccccCCCeeeeecceecC
Q 039630           27 NELKIATNGFRTSNKIGEGGFGSVYKGR-LEDGTVVAVNVLSVES-KQGETEFMSEVASMANINICHENLVKLHGGCIDG  104 (174)
Q Consensus        27 ~~~~~~~~~~~~~~~lg~G~~g~V~~~~-~~~~~~~avK~~~~~~-~~~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~~~  104 (174)
                      ..+....++|++.++||.|..+.||+|. .+.+..||+|++..+. ..+.+.+.+|+..|+.++  ||||++++-.|..+
T Consensus        19 ~~~p~n~~~YeL~e~IG~G~sa~V~~A~c~p~~e~VAIK~inLEkc~~~ld~l~kE~~~msl~~--HPNIv~~~~sFvv~   96 (516)
T KOG0582|consen   19 KEFPLNAKDYELQEVIGVGASAVVYLARCIPTNEVVAIKIINLEKCNNDLDALRKEVQTMSLID--HPNIVTYHCSFVVD   96 (516)
T ss_pred             ccCCCCccceeEEEEEeccceeEeeeeeecccCCEEEEEEeehhhhhhhHHHHHHHHHHhhhcC--CCCcceEEEEEEec
Confidence            3455567889999999999999999999 7788999999998663 334688999999999999  99999999999999


Q ss_pred             CCcccchhhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhccC
Q 039630          105 PSRILAPLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEIK  171 (174)
Q Consensus       105 ~~~~lv~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~~  171 (174)
                      ..+|+|+  .++.+|.+..-+...-             . .-+.+..+..+.++++.||.|||.+.-
T Consensus        97 ~~LWvVm--pfMa~GS~ldIik~~~-------------~-~Gl~E~~Ia~iLre~LkaL~YLH~~G~  147 (516)
T KOG0582|consen   97 SELWVVM--PFMAGGSLLDIIKTYY-------------P-DGLEEASIATILREVLKALDYLHQNGH  147 (516)
T ss_pred             ceeEEee--hhhcCCcHHHHHHHHc-------------c-ccccHHHHHHHHHHHHHHHHHHHhcCc
Confidence            9999999  6666666555332110             0 127889999999999999999998764

>KOG0607 consensus MAP kinase-interacting kinase and related serine/threonine protein kinases [Signal transduction mechanisms]

Probab=99.61  E-value=3.8e-16  Score=110.99  Aligned_cols=113  Identities=21%  Similarity=0.318  Sum_probs=100.0

Q ss_pred             cceecccCCeeEEEEE-EcCCCEEEEEEeeccCccchhHHHHHHHHHhcccccCCCeeeeecceecCCCcccchhhhhhh
Q 039630           39 SNKIGEGGFGSVYKGR-LEDGTVVAVNVLSVESKQGETEFMSEVASMANINICHENLVKLHGGCIDGPSRILAPLQASIE  117 (174)
Q Consensus        39 ~~~lg~G~~g~V~~~~-~~~~~~~avK~~~~~~~~~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~~~~~~~lv~~~~~~~  117 (174)
                      .+.||+|+|+.|-.|. ..+|..+|||++.+.....+.++.+|++++.+++ .|+||+.++++|.++..+|+||  +-+.
T Consensus        83 ~e~LGeGAyasVqtcv~i~t~~EYAVKiidKq~gHsR~RvfREVe~f~~Cq-gh~nilqLiefFEdd~~FYLVf--EKm~  159 (463)
T KOG0607|consen   83 SELLGEGAYASVQTCVSIQTGKEYAVKIIDKQPGHSRSRVFREVETFYQCQ-GHKNILQLIEFFEDDTRFYLVF--EKMR  159 (463)
T ss_pred             HHHhcCccceeeeeeeeeccchhhhhhhhhcCCchHHHHHHHHHHHHHHhc-CCccHHHHHHHhcccceEEEEE--eccc
Confidence            3789999999999998 8889999999998776667888999999999987 7999999999999999999999  8888


Q ss_pred             hhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhcc
Q 039630          118 ALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEI  170 (174)
Q Consensus       118 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  170 (174)
                      ++.++...                .++..+++.....+..+|+.||+|||.+.
T Consensus       160 GGplLshI----------------~~~~~F~E~EAs~vvkdia~aLdFlH~kg  196 (463)
T KOG0607|consen  160 GGPLLSHI----------------QKRKHFNEREASRVVKDIASALDFLHTKG  196 (463)
T ss_pred             CchHHHHH----------------HHhhhccHHHHHHHHHHHHHHHHHHhhcC
Confidence            88888754                23446889999999999999999999864

>KOG0578 consensus p21-activated serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.61  E-value=9.2e-16  Score=115.48  Aligned_cols=118  Identities=19%  Similarity=0.312  Sum_probs=102.5

Q ss_pred             cCCeeecceecccCCeeEEEEE-EcCCCEEEEEEeeccCccchhHHHHHHHHHhcccccCCCeeeeecceecCCCcccch
Q 039630           33 TNGFRTSNKIGEGGFGSVYKGR-LEDGTVVAVNVLSVESKQGETEFMSEVASMANINICHENLVKLHGGCIDGPSRILAP  111 (174)
Q Consensus        33 ~~~~~~~~~lg~G~~g~V~~~~-~~~~~~~avK~~~~~~~~~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~~~~~~~lv~  111 (174)
                      ...|....+||+|+.|.||.+. ..+++.||+|.+........+-+.+|+.+|+..+  |+||+.+++.+...+.+++||
T Consensus       272 ~~~y~~~~kigqgaSG~vy~A~~~~~~~~VaiK~m~l~~Q~~keLilnEi~Vm~~~~--H~NiVnfl~Sylv~deLWVVM  349 (550)
T KOG0578|consen  272 RSKYTDFKKIGQGATGGVYVARKISTKQEVAIKRMDLRKQPKKELLLNEILVMRDLH--HPNIVNFLDSYLVGDELWVVM  349 (550)
T ss_pred             hhhhcchhhhccccccceeeeeeccCCceEEEEEEEeccCCchhhhHHHHHHHHhcc--chHHHHHHHHhcccceeEEEE
Confidence            3468888999999999999999 6778899999998887777778999999999999  999999999999999999999


Q ss_pred             hhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhccC
Q 039630          112 LQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEIK  171 (174)
Q Consensus       112 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~~  171 (174)
                        |+++++.|..                 .-....+++.++..++++++.||+|||.+.-
T Consensus       350 --Eym~ggsLTD-----------------vVt~~~~~E~qIA~Icre~l~aL~fLH~~gI  390 (550)
T KOG0578|consen  350 --EYMEGGSLTD-----------------VVTKTRMTEGQIAAICREILQGLKFLHARGI  390 (550)
T ss_pred             --eecCCCchhh-----------------hhhcccccHHHHHHHHHHHHHHHHHHHhcce
Confidence              8888887554                 2233458999999999999999999998753

>KOG0694 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.61  E-value=2.5e-15  Score=115.46  Aligned_cols=119  Identities=21%  Similarity=0.223  Sum_probs=99.4

Q ss_pred             hcCCeeecceecccCCeeEEEEE-EcCCCEEEEEEeecc---CccchhHHHHHHHHHhcccccCCCeeeeecceecCCCc
Q 039630           32 ATNGFRTSNKIGEGGFGSVYKGR-LEDGTVVAVNVLSVE---SKQGETEFMSEVASMANINICHENLVKLHGGCIDGPSR  107 (174)
Q Consensus        32 ~~~~~~~~~~lg~G~~g~V~~~~-~~~~~~~avK~~~~~---~~~~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~~~~~~  107 (174)
                      ...+|..+++||+|+||+|+.+. ..+++.+|+|++++.   ..++.+....|..|+.... .||.++.++.+|.+.++.
T Consensus       366 ~l~~F~~l~vLGkGsFGkV~lae~k~~~e~yAIK~LKK~~Il~~d~Ve~~~~EkrI~~la~-~HPFL~~L~~~fQT~~~l  444 (694)
T KOG0694|consen  366 TLDDFRLLAVLGRGSFGKVLLAELKGTNEYYAIKVLKKGDILQRDEVESLMCEKRIFELAN-RHPFLVNLFSCFQTKEHL  444 (694)
T ss_pred             cccceEEEEEeccCcCceEEEEEEcCCCcEEEEEEeeccceeccccHHHHHHHHHHHHHhc-cCCeEeecccccccCCeE
Confidence            34679999999999999999999 567889999999877   3566778888888887765 699999999999999998


Q ss_pred             ccchhhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhcc
Q 039630          108 ILAPLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEI  170 (174)
Q Consensus       108 ~lv~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  170 (174)
                      +.||  +|..++.+..                 ......+++..+..++..|+.||+|||++.
T Consensus       445 ~fvm--ey~~Ggdm~~-----------------~~~~~~F~e~rarfyaAev~l~L~fLH~~~  488 (694)
T KOG0694|consen  445 FFVM--EYVAGGDLMH-----------------HIHTDVFSEPRARFYAAEVVLGLQFLHENG  488 (694)
T ss_pred             EEEE--EecCCCcEEE-----------------EEecccccHHHHHHHHHHHHHHHHHHHhcC
Confidence            8888  7777776332                 122346899999999999999999999975

>KOG0585 consensus Ca2+/calmodulin-dependent protein kinase kinase beta and related serine/threonine protein kinases [Signal transduction mechanisms]

Probab=99.61  E-value=3.5e-15  Score=110.67  Aligned_cols=121  Identities=21%  Similarity=0.237  Sum_probs=90.5

Q ss_pred             HhhcCCeeecceecccCCeeEEEEE-EcCCCEEEEEEeeccCc--------------cchhHHHHHHHHHhcccccCCCe
Q 039630           30 KIATNGFRTSNKIGEGGFGSVYKGR-LEDGTVVAVNVLSVESK--------------QGETEFMSEVASMANINICHENL   94 (174)
Q Consensus        30 ~~~~~~~~~~~~lg~G~~g~V~~~~-~~~~~~~avK~~~~~~~--------------~~~~~~~~e~~~l~~l~~~h~~i   94 (174)
                      +...+.|++++.||+|.||.|-++. ..+++.+|+|++.+...              ...+.+.+||.||+++.  |+||
T Consensus        93 ~k~lNqy~l~~eiG~G~yGkVkLar~~~~~~l~AiKil~K~~~~~~~~~~~~~a~~~~~~ekv~~EIailKkl~--H~nV  170 (576)
T KOG0585|consen   93 RKQLNQYELIKEIGSGQYGKVKLARDEVDGKLYAIKILPKKELRRQYGFPRQPAMKLMPIEKVRREIAILKKLH--HPNV  170 (576)
T ss_pred             ceehhheehhhhhcCCccceEEEEeecCCCcEEEEEeechhhhhhhcccccccccccCcHHHHHHHHHHHHhcC--CcCe
Confidence            3344679999999999999999998 56789999999965411              11347899999999999  9999


Q ss_pred             eeeecceecCC--CcccchhhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhcc
Q 039630           95 VKLHGGCIDGP--SRILAPLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEI  170 (174)
Q Consensus        95 ~~~~~~~~~~~--~~~lv~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  170 (174)
                      |+++.+..++.  ..|+|+  +++..+.+          ...      ......+++.+++.++.+++.||+|||.+.
T Consensus       171 V~LiEvLDDP~s~~~YlVl--ey~s~G~v----------~w~------p~d~~els~~~Ar~ylrDvv~GLEYLH~Qg  230 (576)
T KOG0585|consen  171 VKLIEVLDDPESDKLYLVL--EYCSKGEV----------KWC------PPDKPELSEQQARKYLRDVVLGLEYLHYQG  230 (576)
T ss_pred             eEEEEeecCcccCceEEEE--EeccCCcc----------ccC------CCCcccccHHHHHHHHHHHHHHHHHHHhcC
Confidence            99999987763  344444  44443333          221      111222788999999999999999998764

>KOG0196 consensus Tyrosine kinase, EPH (ephrin) receptor family [Signal transduction mechanisms]

Probab=99.61  E-value=1.4e-15  Score=118.60  Aligned_cols=119  Identities=27%  Similarity=0.464  Sum_probs=100.3

Q ss_pred             hhcCCeeecceecccCCeeEEEEEEc----CCCEEEEEEeecc-CccchhHHHHHHHHHhcccccCCCeeeeecceecCC
Q 039630           31 IATNGFRTSNKIGEGGFGSVYKGRLE----DGTVVAVNVLSVE-SKQGETEFMSEVASMANINICHENLVKLHGGCIDGP  105 (174)
Q Consensus        31 ~~~~~~~~~~~lg~G~~g~V~~~~~~----~~~~~avK~~~~~-~~~~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~~~~  105 (174)
                      +..+++.+.++||.|.||.|++|.++    ....||+|.++.. +.+...+|+.|+.||.+.+  ||||+++.|+.....
T Consensus       626 Id~s~i~Ie~VIGaGEFGEVc~GrLk~pgkre~~VAIKTLK~GytekqrrdFL~EAsIMGQFd--HPNIIrLEGVVTks~  703 (996)
T KOG0196|consen  626 IDPSCVKIEKVIGAGEFGEVCSGRLKLPGKREITVAIKTLKAGYTEKQRRDFLSEASIMGQFD--HPNIIRLEGVVTKSK  703 (996)
T ss_pred             cChhheEEEEEEecccccceecccccCCCCcceeEEEeeeccCccHHHHhhhhhhhhhcccCC--CCcEEEEEEEEecCc
Confidence            34467889999999999999999943    3569999999866 4566788999999999999  999999999999999


Q ss_pred             CcccchhhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhh
Q 039630          106 SRILAPLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHE  168 (174)
Q Consensus       106 ~~~lv~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~  168 (174)
                      ..+++.  |+++++.|-..+               +.+...+...++..+.+.||.||.||-+
T Consensus       704 PvMIiT--EyMENGsLDsFL---------------R~~DGqftviQLVgMLrGIAsGMkYLsd  749 (996)
T KOG0196|consen  704 PVMIIT--EYMENGSLDSFL---------------RQNDGQFTVIQLVGMLRGIASGMKYLSD  749 (996)
T ss_pred             eeEEEh--hhhhCCcHHHHH---------------hhcCCceEeehHHHHHHHHHHHhHHHhh
Confidence            888888  888888888765               2233457888889999999999999954

>cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases

Probab=99.61  E-value=4.5e-15  Score=109.55  Aligned_cols=118  Identities=20%  Similarity=0.161  Sum_probs=94.3

Q ss_pred             CCeeecceecccCCeeEEEEE-EcCCCEEEEEEeecc---CccchhHHHHHHHHHhcccccCCCeeeeecceecCCCccc
Q 039630           34 NGFRTSNKIGEGGFGSVYKGR-LEDGTVVAVNVLSVE---SKQGETEFMSEVASMANINICHENLVKLHGGCIDGPSRIL  109 (174)
Q Consensus        34 ~~~~~~~~lg~G~~g~V~~~~-~~~~~~~avK~~~~~---~~~~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~~~~~~~l  109 (174)
                      ++|++.+.||+|+||.||++. ..+++.+|+|++...   .......+..|+.++..++  |+||+.+++.+...+..++
T Consensus         1 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~--~~~i~~~~~~~~~~~~~~l   78 (331)
T cd05597           1 DDFEILKVIGRGAFGEVAVVKMKNTGQVYAMKILNKWEMLKRAETACFREERDVLVNGD--RRWITNLHYAFQDENNLYL   78 (331)
T ss_pred             CCceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCC--CCCCCceEEEEecCCeEEE
Confidence            368889999999999999999 556889999999743   1223455788999999998  9999999999999988888


Q ss_pred             chhhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhcc
Q 039630          110 APLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEI  170 (174)
Q Consensus       110 v~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  170 (174)
                      ++  ++.+++.+...+..               ....+++..+..++.||+.||+|||++.
T Consensus        79 v~--e~~~g~~L~~~l~~---------------~~~~~~~~~~~~~~~qi~~~l~~lH~~~  122 (331)
T cd05597          79 VM--DYYVGGDLLTLLSK---------------FEDRLPEDMARFYLAEMVLAIDSVHQLG  122 (331)
T ss_pred             EE--ecCCCCcHHHHHHH---------------hcCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            88  77666766553311               1224788888999999999999999864

Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy,

>KOG2345 consensus Serine/threonine protein kinase/TGF-beta stimulated factor [Transcription; Lipid transport and metabolism; Signal transduction mechanisms]

Probab=99.61  E-value=5.1e-16  Score=106.57  Aligned_cols=129  Identities=22%  Similarity=0.276  Sum_probs=106.0

Q ss_pred             hHHhhcCCeeecceecccCCeeEEEEE-EcCCCEEEEEEeeccCccchhHHHHHHHHHhcccccCCCeeeeecceecCCC
Q 039630           28 ELKIATNGFRTSNKIGEGGFGSVYKGR-LEDGTVVAVNVLSVESKQGETEFMSEVASMANINICHENLVKLHGGCIDGPS  106 (174)
Q Consensus        28 ~~~~~~~~~~~~~~lg~G~~g~V~~~~-~~~~~~~avK~~~~~~~~~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~~~~~  106 (174)
                      .+.++.++|++.+.||+|+|+.|+.+. ..++..+|+|.+.....++.+...+|++..++++  |||++++++....+..
T Consensus        15 tv~In~~Ryri~~~LgeGGfsfv~LV~~~s~~~~YAlKkI~c~~~~~~e~~~rEid~~rkf~--s~~vl~l~dh~l~~~~   92 (302)
T KOG2345|consen   15 TVIINNKRYRIQRLLGEGGFSFVDLVKGLSTGHLYALKKILCHSQEDIEEALREIDNHRKFN--SPNVLRLVDHQLREEK   92 (302)
T ss_pred             cEEEcCceEEEeeeecCCCceeeeeecccCcccchhhheeeccchHHHHHHHHHHHHHHhhC--CcchHHHHHHHHHhhc
Confidence            345566789999999999999999999 8889999999998777778888999999999999  9999999988866544


Q ss_pred             -----cccchhhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhccCC
Q 039630          107 -----RILAPLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEIKT  172 (174)
Q Consensus       107 -----~~lv~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~~~  172 (174)
                           .|+++  .+...+++...+...            ..+...+++.+.+.++.+||+||.+||+..+|
T Consensus        93 D~~~~~yll~--Pyy~~Gsl~d~i~~~------------k~kg~~~sE~~iL~if~gic~gL~~lH~~~~~  149 (302)
T KOG2345|consen   93 DGKHEAYLLL--PYYKRGSLLDEIERL------------KIKGNFVSEAQILWIFLGICRGLEALHEKEPP  149 (302)
T ss_pred             cCceeEEEEe--ehhccccHHHHHHHH------------hhcCCccCHHHHHHHHHHHHHHHHHHhccCCc
Confidence                 67777  677777666644321            12334689999999999999999999998763

>cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases

Probab=99.61  E-value=7.3e-15  Score=106.21  Aligned_cols=118  Identities=22%  Similarity=0.256  Sum_probs=92.5

Q ss_pred             CeeecceecccCCeeEEEEE-EcCCCEEEEEEeeccC---ccchhHHHHHHHHHhcccccCCCeeeeecceecCCCcccc
Q 039630           35 GFRTSNKIGEGGFGSVYKGR-LEDGTVVAVNVLSVES---KQGETEFMSEVASMANINICHENLVKLHGGCIDGPSRILA  110 (174)
Q Consensus        35 ~~~~~~~lg~G~~g~V~~~~-~~~~~~~avK~~~~~~---~~~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~~~~~~~lv  110 (174)
                      +|+..+.||+|+||.||++. ..++..+|+|.+....   ......+.+|+.+++.++  |+|++.+++.+...+..+++
T Consensus         1 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~--h~~iv~~~~~~~~~~~~~lv   78 (285)
T cd05605           1 TFRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVN--SRFVVSLAYAYETKDALCLV   78 (285)
T ss_pred             CceEEEEEecCCCeEEEEEEEcCCCceEEEEEEehhhhhhhhhHHHHHHHHHHHHhcC--CCCEeeeeeeecCCCeEEEE
Confidence            37788999999999999998 4578899999997542   122345678999999999  99999999999888888888


Q ss_pred             hhhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhcc
Q 039630          111 PLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEI  170 (174)
Q Consensus       111 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  170 (174)
                      +  ++.+++.+...+..              .....+++..+..++.|++.||.|||++.
T Consensus        79 ~--e~~~~~~L~~~~~~--------------~~~~~~~~~~~~~~~~qi~~~l~~lH~~~  122 (285)
T cd05605          79 L--TLMNGGDLKFHIYN--------------MGNPGFDEERAVFYAAEITCGLEDLHRER  122 (285)
T ss_pred             E--eccCCCcHHHHHHh--------------cCcCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            8  66666666543211              11224788999999999999999999854

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5,

>cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases

Probab=99.61  E-value=3.3e-15  Score=107.54  Aligned_cols=119  Identities=19%  Similarity=0.302  Sum_probs=97.4

Q ss_pred             cCCeeecceecccCCeeEEEEEE-cCCCEEEEEEeeccCccchhHHHHHHHHHhcccccCCCeeeeecceecCCCcccch
Q 039630           33 TNGFRTSNKIGEGGFGSVYKGRL-EDGTVVAVNVLSVESKQGETEFMSEVASMANINICHENLVKLHGGCIDGPSRILAP  111 (174)
Q Consensus        33 ~~~~~~~~~lg~G~~g~V~~~~~-~~~~~~avK~~~~~~~~~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~~~~~~~lv~  111 (174)
                      .++|.+.+.||.|+||.||++.. .++..+++|.++.........+..|+.+++.++  |+|++++++.+...+..++++
T Consensus         4 ~~~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~e~~~l~~l~--h~~i~~~~~~~~~~~~~~lv~   81 (280)
T cd06611           4 NDIWEIIGELGDGAFGKVYKAQHKETGLFAAAKIIQIESEEELEDFMVEIDILSECK--HPNIVGLYEAYFYENKLWILI   81 (280)
T ss_pred             hhHHHHHHHhcCCCCceEEEEEEcCCCcEEEEEEEeeCCHHHHHHHHHHHHHHHhCC--CCceeEEEEEEecCCeEEEEe
Confidence            45688889999999999999994 568899999997665555667889999999999  999999999999888888888


Q ss_pred             hhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhcc
Q 039630          112 LQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEI  170 (174)
Q Consensus       112 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  170 (174)
                        ++.+++.+...+.               .....+++..+..++.|++.||.|||++.
T Consensus        82 --e~~~~~~L~~~~~---------------~~~~~l~~~~~~~~~~ql~~~l~~lh~~~  123 (280)
T cd06611          82 --EFCDGGALDSIML---------------ELERGLTEPQIRYVCRQMLEALNFLHSHK  123 (280)
T ss_pred             --eccCCCcHHHHHH---------------HhcCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence              7776666654331               11234788999999999999999999864

Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti

>cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases

Probab=99.61  E-value=5.3e-15  Score=109.76  Aligned_cols=116  Identities=22%  Similarity=0.240  Sum_probs=95.1

Q ss_pred             CCeeecceecccCCeeEEEEE-EcCCCEEEEEEeeccC---ccchhHHHHHHHHHhcccccCCCeeeeecceecCCCccc
Q 039630           34 NGFRTSNKIGEGGFGSVYKGR-LEDGTVVAVNVLSVES---KQGETEFMSEVASMANINICHENLVKLHGGCIDGPSRIL  109 (174)
Q Consensus        34 ~~~~~~~~lg~G~~g~V~~~~-~~~~~~~avK~~~~~~---~~~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~~~~~~~l  109 (174)
                      ++|.+.+.||+|+||.||++. ..++..+|+|+++...   ......+..|+.++..+.  |+|++++++.+...+..++
T Consensus         1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~--~~~i~~~~~~~~~~~~~~l   78 (350)
T cd05573           1 DDFEVIKVIGRGAFGEVWLVRDKDTGQVYAMKVLRKSDMIKRNQIAHVRAERDILADAD--SPWIVKLYYSFQDEEHLYL   78 (350)
T ss_pred             CCceEEEEEEeCCcEEEEEEEECCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhcC--CCCccchhhheecCCeEEE
Confidence            368889999999999999999 4578999999997542   234556888999999999  9999999999999888888


Q ss_pred             chhhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhc
Q 039630          110 APLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEE  169 (174)
Q Consensus       110 v~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~  169 (174)
                      ++  ++..++.+...+..                ...+++..+..++.|++.||+|||++
T Consensus        79 v~--e~~~~~~L~~~l~~----------------~~~l~~~~~~~i~~qi~~aL~~LH~~  120 (350)
T cd05573          79 VM--EYMPGGDLMNLLIR----------------KDVFPEETARFYIAELVLALDSVHKL  120 (350)
T ss_pred             EE--cCCCCCCHHHHHHH----------------cCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence            88  77766666554321                13578888899999999999999984

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the

>cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4

Probab=99.61  E-value=8.7e-15  Score=105.80  Aligned_cols=117  Identities=21%  Similarity=0.249  Sum_probs=92.2

Q ss_pred             CeeecceecccCCeeEEEEE-EcCCCEEEEEEeeccC---ccchhHHHHHHHHHhcccccCCCeeeeecceecCCCcccc
Q 039630           35 GFRTSNKIGEGGFGSVYKGR-LEDGTVVAVNVLSVES---KQGETEFMSEVASMANINICHENLVKLHGGCIDGPSRILA  110 (174)
Q Consensus        35 ~~~~~~~lg~G~~g~V~~~~-~~~~~~~avK~~~~~~---~~~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~~~~~~~lv  110 (174)
                      .|+..+.||+|+||.||++. ..++..+|+|.+....   ......+.+|+.++..++  |++++.+.+.+...+..+++
T Consensus         1 ~f~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~--~~~iv~~~~~~~~~~~~~lv   78 (285)
T cd05631           1 TFRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKRILEKVN--SRFVVSLAYAYETKDALCLV   78 (285)
T ss_pred             CceEEEEEecCCCEEEEEEEEecCCceEEEEEeeHhhhhhhhhHHHHHHHHHHHHhcC--CCcEEEEEEEEccCCeEEEE
Confidence            36778999999999999998 5678999999987442   222345778999999999  99999999999888888888


Q ss_pred             hhhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhc
Q 039630          111 PLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEE  169 (174)
Q Consensus       111 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~  169 (174)
                      +  ++.+++.+......              .....+++..+..++.|++.||+|||++
T Consensus        79 ~--e~~~~g~L~~~~~~--------------~~~~~~~~~~~~~~~~qi~~~l~~lH~~  121 (285)
T cd05631          79 L--TIMNGGDLKFHIYN--------------MGNPGFDEQRAIFYAAELCCGLEDLQRE  121 (285)
T ss_pred             E--EecCCCcHHHHHHh--------------hCCCCCCHHHHHHHHHHHHHHHHHHHhC
Confidence            8  66666666442211              1112478888999999999999999985

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i

>KOG4257 consensus Focal adhesion tyrosine kinase FAK, contains FERM domain [Signal transduction mechanisms]

Probab=99.61  E-value=2.4e-15  Score=115.07  Aligned_cols=120  Identities=25%  Similarity=0.373  Sum_probs=95.9

Q ss_pred             HhhcCCeeecceecccCCeeEEEEEEcC-----CCEEEEEEeecc-CccchhHHHHHHHHHhcccccCCCeeeeecceec
Q 039630           30 KIATNGFRTSNKIGEGGFGSVYKGRLED-----GTVVAVNVLSVE-SKQGETEFMSEVASMANINICHENLVKLHGGCID  103 (174)
Q Consensus        30 ~~~~~~~~~~~~lg~G~~g~V~~~~~~~-----~~~~avK~~~~~-~~~~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~~  103 (174)
                      ++.+....+.++||+|.||.||+|.+.+     ...||||..+.. +++..+.|..|+.+|++++  ||||++++|.|..
T Consensus       385 el~Re~Itl~r~iG~GqFGdVy~gvYt~~~kge~iaVAvKtCK~d~t~d~tekflqEa~iMrnfd--HphIikLIGv~~e  462 (974)
T KOG4257|consen  385 ELRRELITLKRLIGEGQFGDVYKGVYTDPEKGERIAVAVKTCKTDCTPDDTEKFLQEASIMRNFD--HPHIIKLIGVCVE  462 (974)
T ss_pred             eeehhhccHHHhhcCCcccceeeeEecccccCcceeeeeehhccCCChhhHHHHHHHHHHHHhCC--Ccchhheeeeeec
Confidence            3344456777899999999999999432     247899999875 6677889999999999999  9999999999976


Q ss_pred             CCCcccchhhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhc
Q 039630          104 GPSRILAPLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEE  169 (174)
Q Consensus       104 ~~~~~lv~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~  169 (174)
                      . +.++|+  +..+.|.|..++.               .++..++...+..+++||+.+|+|||+.
T Consensus       463 ~-P~Wivm--EL~~~GELr~yLq---------------~nk~sL~l~tL~ly~~Qi~talaYLeSk  510 (974)
T KOG4257|consen  463 Q-PMWIVM--ELAPLGELREYLQ---------------QNKDSLPLRTLTLYCYQICTALAYLESK  510 (974)
T ss_pred             c-ceeEEE--ecccchhHHHHHH---------------hccccchHHHHHHHHHHHHHHHHHHHhh
Confidence            5 466676  7777777766552               3344678888889999999999999874

>cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5

Probab=99.60  E-value=7.7e-15  Score=104.91  Aligned_cols=117  Identities=20%  Similarity=0.306  Sum_probs=95.0

Q ss_pred             CCeeecceecccCCeeEEEEE-EcCCCEEEEEEeeccCccchhHHHHHHHHHhcccccCCCeeeeecceecCCCcccchh
Q 039630           34 NGFRTSNKIGEGGFGSVYKGR-LEDGTVVAVNVLSVESKQGETEFMSEVASMANINICHENLVKLHGGCIDGPSRILAPL  112 (174)
Q Consensus        34 ~~~~~~~~lg~G~~g~V~~~~-~~~~~~~avK~~~~~~~~~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~~~~~~~lv~~  112 (174)
                      ++|++.+.||+|+||.||++. ..++..+++|++..........+.+|+.++..++  |+|++++++.+...+..++++ 
T Consensus         9 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~~~~~~~~~~e~~~l~~~~--h~~ii~~~~~~~~~~~~~iv~-   85 (267)
T cd06646           9 HDYELIQRVGSGTYGDVYKARNLHTGELAAVKIIKLEPGDDFSLIQQEIFMVKECK--HCNIVAYFGSYLSREKLWICM-   85 (267)
T ss_pred             hhcchhheeecCCCeEEEEEEECCCCeEEEEEEEecCccchHHHHHHHHHHHHhcC--CCCeeeeeEEEEeCCEEEEEE-
Confidence            468899999999999999999 4678899999997654445566888999999999  999999999999888888887 


Q ss_pred             hhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhcc
Q 039630          113 QASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEI  170 (174)
Q Consensus       113 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  170 (174)
                       ++.+++.+...+.                ....+++..+..++.|++.||.|||+..
T Consensus        86 -e~~~~~~L~~~~~----------------~~~~~~~~~~~~~~~qi~~~l~~lH~~~  126 (267)
T cd06646          86 -EYCGGGSLQDIYH----------------VTGPLSELQIAYVCRETLQGLAYLHSKG  126 (267)
T ss_pred             -eCCCCCcHHHHHH----------------hcCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence             6666665544221                1224688888999999999999999864

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated

>KOG0594 consensus Protein kinase PCTAIRE and related kinases [General function prediction only]

Probab=99.60  E-value=5.7e-15  Score=105.77  Aligned_cols=120  Identities=22%  Similarity=0.307  Sum_probs=90.0

Q ss_pred             CCeeecceecccCCeeEEEEE-EcCCCEEEEEEeeccCc--cchhHHHHHHHHHhcccccCCC-eeeeecceecCC----
Q 039630           34 NGFRTSNKIGEGGFGSVYKGR-LEDGTVVAVNVLSVESK--QGETEFMSEVASMANINICHEN-LVKLHGGCIDGP----  105 (174)
Q Consensus        34 ~~~~~~~~lg~G~~g~V~~~~-~~~~~~~avK~~~~~~~--~~~~~~~~e~~~l~~l~~~h~~-i~~~~~~~~~~~----  105 (174)
                      ..|..+++||+|+||.||+|+ ..+|+.||+|.+.....  .......+|+.+++.++  |+| |+.+.+.+.+.+    
T Consensus        11 ~~~~~~eklGeGtyg~Vykar~~~~g~~VALKkirl~~~~EG~P~taiREisllk~L~--~~~~iv~L~dv~~~~~~~~~   88 (323)
T KOG0594|consen   11 FDYEKVEKLGEGTYGVVYKARSKRTGKFVALKKIRLEFEEEGVPSTAIREISLLKRLS--HANHIVRLHDVIHTSNNHRG   88 (323)
T ss_pred             HHHHHHHHhCCCCceEEEEEEEecCCCEEEEEEEeccccccCCCchhhHHHHHHHHhC--CCcceEEEEeeeeecccccc
Confidence            346667889999999999999 77899999999987633  24556789999999999  999 999999998877    


Q ss_pred             --CcccchhhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhcc
Q 039630          106 --SRILAPLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEI  170 (174)
Q Consensus       106 --~~~lv~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  170 (174)
                        ..++++++...+........            ..   ....++...+..+++|++.||+|||++.
T Consensus        89 ~~~l~lvfe~~d~DL~~ymd~~------------~~---~~~g~~~~~ik~~m~Qll~gl~~~H~~~  140 (323)
T KOG0594|consen   89 IGKLYLVFEFLDRDLKKYMDSL------------PK---KPQGLPPRLIKSFMRQLLRGLAFLHSHG  140 (323)
T ss_pred             cceEEEEEEeecccHHHHHHhc------------cc---cccCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence              56677744333332222211            10   0023566788999999999999998864

>cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome

Probab=99.60  E-value=8.3e-15  Score=104.28  Aligned_cols=117  Identities=23%  Similarity=0.385  Sum_probs=93.3

Q ss_pred             CCeeecceecccCCeeEEEEEEcCCCEEEEEEeeccCccchhHHHHHHHHHhcccccCCCeeeeecceecCCCcccchhh
Q 039630           34 NGFRTSNKIGEGGFGSVYKGRLEDGTVVAVNVLSVESKQGETEFMSEVASMANINICHENLVKLHGGCIDGPSRILAPLQ  113 (174)
Q Consensus        34 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~avK~~~~~~~~~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~~~~~~~lv~~~  113 (174)
                      ++|...+.||+|+||.||.+.+.++..+|+|.++.. ....+.+.+|+.++..++  |||++++++++...+..++++  
T Consensus         4 ~~~~~~~~lg~G~~~~vy~~~~~~~~~~aik~~~~~-~~~~~~~~~e~~~l~~l~--h~~i~~~~~~~~~~~~~~lv~--   78 (256)
T cd05113           4 KDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEG-SMSEDEFIEEAKVMMKLS--HEKLVQLYGVCTKQRPIYIVT--   78 (256)
T ss_pred             HHeEEeeEecCcccceEEEEEecCCCcEEEEEcCCC-cccHHHHHHHHHHHhcCC--CCCeeeEEEEEccCCCcEEEE--
Confidence            457888999999999999998776667999998743 233567889999999999  999999999998888888888  


Q ss_pred             hhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhcc
Q 039630          114 ASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEI  170 (174)
Q Consensus       114 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  170 (174)
                      ++...+.+...+..               ....+++..++.++.|++.||+|||+..
T Consensus        79 e~~~~~~l~~~i~~---------------~~~~~~~~~~~~~~~~i~~~l~~lH~~~  120 (256)
T cd05113          79 EYMSNGCLLNYLRE---------------HGKRFQPSQLLEMCKDVCEGMAYLESKQ  120 (256)
T ss_pred             EcCCCCcHHHHHHh---------------cCCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            66666655543311               1124788999999999999999999753

Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds

>cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B

Probab=99.60  E-value=4.9e-15  Score=108.98  Aligned_cols=111  Identities=23%  Similarity=0.210  Sum_probs=89.8

Q ss_pred             ceecccCCeeEEEEE-EcCCCEEEEEEeeccC---ccchhHHHHHHHHHhcccccCCCeeeeecceecCCCcccchhhhh
Q 039630           40 NKIGEGGFGSVYKGR-LEDGTVVAVNVLSVES---KQGETEFMSEVASMANINICHENLVKLHGGCIDGPSRILAPLQAS  115 (174)
Q Consensus        40 ~~lg~G~~g~V~~~~-~~~~~~~avK~~~~~~---~~~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~~~~~~~lv~~~~~  115 (174)
                      +.||+|+||.||++. ..++..+|+|+++...   ......+.+|+.+++.++  |+||+++.+.+...+..++++  ++
T Consensus         1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~--hp~i~~~~~~~~~~~~~~lv~--e~   76 (323)
T cd05571           1 KLLGKGTFGKVILVREKATGKYYAMKILKKEVIIAKDEVAHTLTESRVLQNTR--HPFLTALKYSFQTHDRLCFVM--EY   76 (323)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCC--CCCCCCEEEEEEcCCEEEEEE--eC
Confidence            468999999999998 5678999999997542   233456788999999999  999999999999988888888  77


Q ss_pred             hhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhcc
Q 039630          116 IEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEI  170 (174)
Q Consensus       116 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  170 (174)
                      .+++.+...+.                ....+++..+..++.|++.||+|||++.
T Consensus        77 ~~~~~L~~~l~----------------~~~~~~~~~~~~~~~qi~~~L~~lH~~~  115 (323)
T cd05571          77 ANGGELFFHLS----------------RERVFSEDRARFYGAEIVSALGYLHSCD  115 (323)
T ss_pred             CCCCcHHHHHH----------------HcCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            77776655331                1234788888999999999999999864

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be

>cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3

Probab=99.60  E-value=3e-15  Score=110.66  Aligned_cols=138  Identities=21%  Similarity=0.290  Sum_probs=95.8

Q ss_pred             HHhhcCCeeecceecccCCeeEEEEEE------cCCCEEEEEEeeccC-ccchhHHHHHHHHHhcc-cccCCCeeeeecc
Q 039630           29 LKIATNGFRTSNKIGEGGFGSVYKGRL------EDGTVVAVNVLSVES-KQGETEFMSEVASMANI-NICHENLVKLHGG  100 (174)
Q Consensus        29 ~~~~~~~~~~~~~lg~G~~g~V~~~~~------~~~~~~avK~~~~~~-~~~~~~~~~e~~~l~~l-~~~h~~i~~~~~~  100 (174)
                      |.+..++|++.+.||+|+||.||+|..      .++..||+|.++... ......+.+|+.++..+ +  |+||+++++.
T Consensus         2 ~~~~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~--h~niv~~~~~   79 (338)
T cd05102           2 WEFPRDRLRLGKVLGHGAFGKVVEASAFGIDKKSSCNTVAVKMLKEGATASEHKALMSELKILIHIGN--HLNVVNLLGA   79 (338)
T ss_pred             cccchhHceeeeEeccCCcceEEEEEEeccCCcccchhhheeccccccchHHHHHHHHHHHHHHHhcc--CcceeeEEeE
Confidence            455667899999999999999999973      234689999997442 23355788999999998 6  9999999998


Q ss_pred             eecCC-Ccccchhhhhhhhhhhhhhhhcccceeeeeee----------------------------------c-------
Q 039630          101 CIDGP-SRILAPLQASIEALFLFTKLWKMDKFISIYVV----------------------------------S-------  138 (174)
Q Consensus       101 ~~~~~-~~~lv~~~~~~~~~~l~~~~~~~~~~~~~~~~----------------------------------~-------  138 (174)
                      +...+ ..++++  ++.+++.|...+............                                  .       
T Consensus        80 ~~~~~~~~~lv~--ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  157 (338)
T cd05102          80 CTKPNGPLMVIV--EFCKYGNLSNFLRAKREFFSPYREKSPKQRGRFRAMVEQSRVDRRIEAGQASVLFSRFQPSTSGST  157 (338)
T ss_pred             ecCCCCceEEEE--ecCCCCcHHHHHHhcchhcccccccchhhhhhhhhhhhhhccccccccccCCccccccccccCccc
Confidence            87654 356666  777777776544332111000000                                  0       


Q ss_pred             -----CCCCCcccCCHHHHHHHHHHHHHHHHHhhhcc
Q 039630          139 -----GSKKNRVKFNWIARREIALGIARGLAYIHEEI  170 (174)
Q Consensus       139 -----~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  170 (174)
                           ........+++..+..++.|++.||+|||++.
T Consensus       158 ~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~  194 (338)
T cd05102         158 NPPQETDDLWKSPLTMEDLICYSFQVARGMEFLASRK  194 (338)
T ss_pred             ccchhccccccCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence                 00001234778888999999999999999853

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V

>cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2

Probab=99.60  E-value=6.3e-15  Score=108.75  Aligned_cols=117  Identities=18%  Similarity=0.265  Sum_probs=95.7

Q ss_pred             cCCeeecceecccCCeeEEEEE-EcCCCEEEEEEeeccC-ccchhHHHHHHHHHhcccccCCCeeeeecceecCCCcccc
Q 039630           33 TNGFRTSNKIGEGGFGSVYKGR-LEDGTVVAVNVLSVES-KQGETEFMSEVASMANINICHENLVKLHGGCIDGPSRILA  110 (174)
Q Consensus        33 ~~~~~~~~~lg~G~~g~V~~~~-~~~~~~~avK~~~~~~-~~~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~~~~~~~lv  110 (174)
                      .++|+..+.||+|+||.||++. ..++..+|+|.+.... ......+.+|+.+++.++  |+||+++++.+...+..+++
T Consensus         4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~--h~~iv~~~~~~~~~~~~~lv   81 (331)
T cd06649           4 DDDFERISELGAGNGGVVTKVQHKPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECN--SPYIVGFYGAFYSDGEISIC   81 (331)
T ss_pred             cccceEEEeecCCCCEEEEEEEECCCCcEEEEEEeecccCHHHHHHHHHHHHHHHHCC--CCCCCeEEEEEEECCEEEEE
Confidence            4679999999999999999999 4578899999997552 234567899999999999  99999999999988888888


Q ss_pred             hhhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhc
Q 039630          111 PLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEE  169 (174)
Q Consensus       111 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~  169 (174)
                      +  ++.+++.+...+.                ....+++..+..++.|++.||.|||++
T Consensus        82 ~--e~~~~~~L~~~l~----------------~~~~~~~~~~~~~~~~i~~~l~~lH~~  122 (331)
T cd06649          82 M--EHMDGGSLDQVLK----------------EAKRIPEEILGKVSIAVLRGLAYLREK  122 (331)
T ss_pred             e--ecCCCCcHHHHHH----------------HcCCCCHHHHHHHHHHHHHHHHHHhhc
Confidence            8  7777766655331                122478888899999999999999974

Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst

>cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2

Probab=99.60  E-value=1e-14  Score=108.83  Aligned_cols=116  Identities=18%  Similarity=0.170  Sum_probs=94.8

Q ss_pred             CeeecceecccCCeeEEEEE-EcCCCEEEEEEeecc---CccchhHHHHHHHHHhcccccCCCeeeeecceecCCCcccc
Q 039630           35 GFRTSNKIGEGGFGSVYKGR-LEDGTVVAVNVLSVE---SKQGETEFMSEVASMANINICHENLVKLHGGCIDGPSRILA  110 (174)
Q Consensus        35 ~~~~~~~lg~G~~g~V~~~~-~~~~~~~avK~~~~~---~~~~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~~~~~~~lv  110 (174)
                      +|+..+.||+|+||.||.+. ..++..+|+|+++..   .......+..|+.++..++  |++++++++.+...+..+++
T Consensus         2 ~f~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~--~~~iv~~~~~~~~~~~~~lv   79 (360)
T cd05627           2 DFESLKVIGRGAFGEVRLVQKKDTGHIYAMKILRKADMLEKEQVAHIRAERDILVEAD--GAWVVKMFYSFQDKRNLYLI   79 (360)
T ss_pred             CceEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCC--CCCEeeEEEEEEcCCEEEEE
Confidence            58888999999999999998 457889999999743   2233556788999999998  99999999999998888888


Q ss_pred             hhhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhcc
Q 039630          111 PLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEI  170 (174)
Q Consensus       111 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  170 (174)
                      +  ++.+++.+...+.                ....+++..+..++.|++.||+|||++.
T Consensus        80 ~--E~~~gg~L~~~l~----------------~~~~l~~~~~~~~~~qi~~~L~~lH~~g  121 (360)
T cd05627          80 M--EFLPGGDMMTLLM----------------KKDTLSEEATQFYIAETVLAIDAIHQLG  121 (360)
T ss_pred             E--eCCCCccHHHHHH----------------hcCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            8  7777777665431                1234788888999999999999999854

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul

>cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk

Probab=99.60  E-value=3.2e-15  Score=106.50  Aligned_cols=121  Identities=23%  Similarity=0.400  Sum_probs=99.1

Q ss_pred             hcCCeeecceecccCCeeEEEEEEcCCCEEEEEEeeccCccchhHHHHHHHHHhcccccCCCeeeeecceecCCCcccch
Q 039630           32 ATNGFRTSNKIGEGGFGSVYKGRLEDGTVVAVNVLSVESKQGETEFMSEVASMANINICHENLVKLHGGCIDGPSRILAP  111 (174)
Q Consensus        32 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~avK~~~~~~~~~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~~~~~~~lv~  111 (174)
                      ...+|.+.+.||+|+||.||++...++..+++|.++.........+..|+.+++.++  |+|++++++.+...+..++++
T Consensus         4 ~~~~y~~~~~ig~g~~~~vy~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~--~~~i~~~~~~~~~~~~~~lv~   81 (261)
T cd05148           4 PREEFTLERKLGSGYFGEVWEGLWKNRVRVAIKILKSDDLLKQQDFQKEVQALKRLR--HKHLISLFAVCSVGEPVYIIT   81 (261)
T ss_pred             cHHHHHHhhhhccCCCccEEEeEecCCCcEEEEeccccchhhHHHHHHHHHHHhcCC--CcchhheeeeEecCCCeEEEE
Confidence            345688889999999999999997778899999998665555677899999999999  999999999999988888888


Q ss_pred             hhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhcc
Q 039630          112 LQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEI  170 (174)
Q Consensus       112 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  170 (174)
                        ++.+.+.+...+..              .....+++..+..++.|++.|+.|||++.
T Consensus        82 --e~~~~~~L~~~~~~--------------~~~~~~~~~~~~~~~~~i~~al~~lH~~~  124 (261)
T cd05148          82 --ELMEKGSLLAFLRS--------------PEGQVLPVASLIDMACQVAEGMAYLEEQN  124 (261)
T ss_pred             --eecccCCHHHHHhc--------------CCCCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence              77766666553311              12234788889999999999999999864

Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom

>PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional

Probab=99.60  E-value=6.9e-15  Score=108.96  Aligned_cols=117  Identities=21%  Similarity=0.186  Sum_probs=93.8

Q ss_pred             CCeeecceecccCCeeEEEEEEc-C-CCEEEEEEeecc---CccchhHHHHHHHHHhcccccCCCeeeeecceecCCCcc
Q 039630           34 NGFRTSNKIGEGGFGSVYKGRLE-D-GTVVAVNVLSVE---SKQGETEFMSEVASMANINICHENLVKLHGGCIDGPSRI  108 (174)
Q Consensus        34 ~~~~~~~~lg~G~~g~V~~~~~~-~-~~~~avK~~~~~---~~~~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~~~~~~~  108 (174)
                      ++|...+.||+|+||.||++... + +..+|+|.+...   .......+.+|+.++..++  ||||+++++.+...+..+
T Consensus        30 ~~y~~~~~ig~G~~g~Vy~a~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~--hp~Iv~~~~~~~~~~~~~  107 (340)
T PTZ00426         30 EDFNFIRTLGTGSFGRVILATYKNEDFPPVAIKRFEKSKIIKQKQVDHVFSERKILNYIN--HPFCVNLYGSFKDESYLY  107 (340)
T ss_pred             hhcEEEEEEeecCCeEEEEEEEECCCCeEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCC--CCCCcceEEEEEeCCEEE
Confidence            56888999999999999999843 3 368999998644   2334556888999999999  999999999999988888


Q ss_pred             cchhhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhcc
Q 039630          109 LAPLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEI  170 (174)
Q Consensus       109 lv~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  170 (174)
                      +++  ++..++.+...+.                ....+++..+..++.|++.||.|||++.
T Consensus       108 lv~--Ey~~~g~L~~~i~----------------~~~~~~~~~~~~~~~qi~~aL~~LH~~~  151 (340)
T PTZ00426        108 LVL--EFVIGGEFFTFLR----------------RNKRFPNDVGCFYAAQIVLIFEYLQSLN  151 (340)
T ss_pred             EEE--eCCCCCcHHHHHH----------------HcCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            888  7777776655331                1234788888999999999999999864

>cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase

Probab=99.60  E-value=3.4e-15  Score=111.81  Aligned_cols=119  Identities=23%  Similarity=0.181  Sum_probs=94.9

Q ss_pred             hhcCCeeecceecccCCeeEEEEE-EcCCCEEEEEEeeccC---ccchhHHHHHHHHHhcccccCCCeeeeecceecCCC
Q 039630           31 IATNGFRTSNKIGEGGFGSVYKGR-LEDGTVVAVNVLSVES---KQGETEFMSEVASMANINICHENLVKLHGGCIDGPS  106 (174)
Q Consensus        31 ~~~~~~~~~~~lg~G~~g~V~~~~-~~~~~~~avK~~~~~~---~~~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~~~~~  106 (174)
                      ...++|...+.||+|+||.||++. ..++..+|+|+++...   ......+..|+.+++.++  |+||+++++.+...+.
T Consensus        40 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~--h~~iv~~~~~~~~~~~  117 (370)
T cd05596          40 MKAEDFDVIKVIGRGAFGEVQLVRHKSSKQVYAMKLLSKFEMIKRSDSAFFWEERDIMAHAN--SEWIVQLHYAFQDDKY  117 (370)
T ss_pred             CCHHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCC--CCCcceEEEEEecCCE
Confidence            344679999999999999999998 4578899999997431   223445778999999999  9999999999998888


Q ss_pred             cccchhhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhcc
Q 039630          107 RILAPLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEI  170 (174)
Q Consensus       107 ~~lv~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  170 (174)
                      .++++  ++.+++.+...+.                 ...+++.....++.|++.||.|||++.
T Consensus       118 ~~lv~--Ey~~gg~L~~~l~-----------------~~~l~~~~~~~~~~qi~~aL~~LH~~~  162 (370)
T cd05596         118 LYMVM--EYMPGGDLVNLMS-----------------NYDIPEKWARFYTAEVVLALDAIHSMG  162 (370)
T ss_pred             EEEEE--cCCCCCcHHHHHH-----------------hcCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            88888  7777776665321                 123677788889999999999999853

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in

>cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase

Probab=99.60  E-value=9e-15  Score=106.86  Aligned_cols=115  Identities=18%  Similarity=0.243  Sum_probs=93.4

Q ss_pred             CeeecceecccCCeeEEEEE-EcCCCEEEEEEeeccC-ccchhHHHHHHHHHhcccccCCCeeeeecceecCCCcccchh
Q 039630           35 GFRTSNKIGEGGFGSVYKGR-LEDGTVVAVNVLSVES-KQGETEFMSEVASMANINICHENLVKLHGGCIDGPSRILAPL  112 (174)
Q Consensus        35 ~~~~~~~lg~G~~g~V~~~~-~~~~~~~avK~~~~~~-~~~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~~~~~~~lv~~  112 (174)
                      +|...+.||+|+||.||++. ..++..+++|.++... ......+.+|+.++.+++  |+||+++++.+...+..++++ 
T Consensus         2 ~~~~~~~lg~G~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~--h~~iv~~~~~~~~~~~~~lv~-   78 (308)
T cd06615           2 DFEKLGELGAGNGGVVTKVLHRPSGLIMARKLIHLEIKPAIRNQIIRELKVLHECN--SPYIVGFYGAFYSDGEISICM-   78 (308)
T ss_pred             CceEEeeccCCCCeEEEEEEEcCCCeEEEEEEeccccCHHHHHHHHHHHHHHHhCC--CCCCCeEEEEEeeCCEEEEEe-
Confidence            58888999999999999998 5568889999987542 223456889999999999  999999999999999888888 


Q ss_pred             hhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhc
Q 039630          113 QASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEE  169 (174)
Q Consensus       113 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~  169 (174)
                       ++.+++.+...+.                ....+++..+..++.|++.||.|||++
T Consensus        79 -ey~~~~~L~~~l~----------------~~~~~~~~~~~~~~~~i~~~l~~lH~~  118 (308)
T cd06615          79 -EHMDGGSLDQVLK----------------KAGRIPENILGKISIAVLRGLTYLREK  118 (308)
T ss_pred             -eccCCCcHHHHHH----------------hcCCCCHHHHHHHHHHHHHHHHHHHhh
Confidence             7776666654331                123478888899999999999999974

Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down

>cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1

Probab=99.60  E-value=5.8e-15  Score=109.07  Aligned_cols=117  Identities=16%  Similarity=0.269  Sum_probs=94.9

Q ss_pred             cCCeeecceecccCCeeEEEEE-EcCCCEEEEEEeeccC-ccchhHHHHHHHHHhcccccCCCeeeeecceecCCCcccc
Q 039630           33 TNGFRTSNKIGEGGFGSVYKGR-LEDGTVVAVNVLSVES-KQGETEFMSEVASMANINICHENLVKLHGGCIDGPSRILA  110 (174)
Q Consensus        33 ~~~~~~~~~lg~G~~g~V~~~~-~~~~~~~avK~~~~~~-~~~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~~~~~~~lv  110 (174)
                      .++|++.+.||+|+||.||++. ..++..+++|.++... ......+.+|+.++..++  |+||+++++.+...+..+++
T Consensus         4 ~~~y~~~~~lg~g~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~--h~~iv~~~~~~~~~~~~~lv   81 (333)
T cd06650           4 DDDFEKISELGAGNGGVVFKVSHKPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECN--SPYIVGFYGAFYSDGEISIC   81 (333)
T ss_pred             hhhhheeccccCCCCEEEEEEEECCCCcEEEEEEeecccCHHHHHHHHHHHHHHHHCC--CCcccceeEEEEECCEEEEE
Confidence            4678999999999999999998 4568889999987542 233456889999999999  99999999999999888888


Q ss_pred             hhhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhc
Q 039630          111 PLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEE  169 (174)
Q Consensus       111 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~  169 (174)
                      +  ++..++.|...+.                ....+++..+..++.|++.||.|||++
T Consensus        82 ~--e~~~~~~L~~~l~----------------~~~~~~~~~~~~~~~~l~~~l~~lH~~  122 (333)
T cd06650          82 M--EHMDGGSLDQVLK----------------KAGRIPEQILGKVSIAVIKGLTYLREK  122 (333)
T ss_pred             E--ecCCCCcHHHHHH----------------HcCCCCHHHHHHHHHHHHHHHHHHHhc
Confidence            8  7776666655331                122467888889999999999999974

Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst

>KOG0605 consensus NDR and related serine/threonine kinases [General function prediction only]

Probab=99.60  E-value=5.4e-15  Score=110.84  Aligned_cols=120  Identities=22%  Similarity=0.215  Sum_probs=97.1

Q ss_pred             cCCeeecceecccCCeeEEEEE-EcCCCEEEEEEeeccC---ccchhHHHHHHHHHhcccccCCCeeeeecceecCCCcc
Q 039630           33 TNGFRTSNKIGEGGFGSVYKGR-LEDGTVVAVNVLSVES---KQGETEFMSEVASMANINICHENLVKLHGGCIDGPSRI  108 (174)
Q Consensus        33 ~~~~~~~~~lg~G~~g~V~~~~-~~~~~~~avK~~~~~~---~~~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~~~~~~~  108 (174)
                      .++|.++++||+|+||.||.|. ..+|..+|+|+++++.   ......+..|-.+|...+  .++||+++-.|.+.+.+|
T Consensus       140 ~~DFe~Lk~IgkGAfGeVrLarKk~Tg~iyAmK~LkKS~M~~~~Qv~hV~aERdiL~~~d--s~~vVKLyYsFQD~~~LY  217 (550)
T KOG0605|consen  140 LDDFELLKVIGKGAFGEVRLARKKDTGEIYAMKILKKSEMLKKNQVEHVRAERDILAEVD--SPWVVKLYYSFQDKEYLY  217 (550)
T ss_pred             cccchhheeeccccceeEEEEEEccCCcEEeeecccHHHHHhhhhHHHHHHHHHHhhhcC--CCcEEEEEEEecCCCeeE
Confidence            3679999999999999999999 6689999999998773   456778999999999988  999999999999999999


Q ss_pred             cchhhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHH------hhhccCC
Q 039630          109 LAPLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAY------IHEEIKT  172 (174)
Q Consensus       109 lv~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~y------LH~~~~~  172 (174)
                      |+|  |+.++|.+...++..                ..+++..+..++.+++.|++-      +|+.+||
T Consensus       218 LiM--EylPGGD~mTLL~~~----------------~~L~e~~arfYiaE~vlAI~~iH~~gyIHRDIKP  269 (550)
T KOG0605|consen  218 LIM--EYLPGGDMMTLLMRK----------------DTLTEDWARFYIAETVLAIESIHQLGYIHRDIKP  269 (550)
T ss_pred             EEE--EecCCccHHHHHHhc----------------CcCchHHHHHHHHHHHHHHHHHHHcCcccccCCh
Confidence            999  888888887755332                346666666677666666654      5555655

>cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta

Probab=99.60  E-value=6.7e-15  Score=108.28  Aligned_cols=111  Identities=23%  Similarity=0.222  Sum_probs=89.6

Q ss_pred             ceecccCCeeEEEEE-EcCCCEEEEEEeecc---CccchhHHHHHHHHHhcccccCCCeeeeecceecCCCcccchhhhh
Q 039630           40 NKIGEGGFGSVYKGR-LEDGTVVAVNVLSVE---SKQGETEFMSEVASMANINICHENLVKLHGGCIDGPSRILAPLQAS  115 (174)
Q Consensus        40 ~~lg~G~~g~V~~~~-~~~~~~~avK~~~~~---~~~~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~~~~~~~lv~~~~~  115 (174)
                      +.||+|+||.||++. ..+|..+|+|+++..   .......+..|+.+++.++  |||++++++.+...+..++++  ++
T Consensus         1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~--hp~i~~~~~~~~~~~~~~lv~--E~   76 (323)
T cd05595           1 KLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTR--HPFLTALKYAFQTHDRLCFVM--EY   76 (323)
T ss_pred             CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCC--CCCCcceeeEEecCCEEEEEE--eC
Confidence            468999999999998 457899999999754   2233456778999999999  999999999999988888888  77


Q ss_pred             hhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhcc
Q 039630          116 IEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEI  170 (174)
Q Consensus       116 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  170 (174)
                      .+++.+...+.                ....+++..+..++.|++.||.|||++.
T Consensus        77 ~~~~~L~~~l~----------------~~~~~~~~~~~~~~~qi~~aL~~LH~~~  115 (323)
T cd05595          77 ANGGELFFHLS----------------RERVFTEERARFYGAEIVSALEYLHSRD  115 (323)
T ss_pred             CCCCcHHHHHH----------------HcCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            77777654331                1234788899999999999999999863

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in

>cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2

Probab=99.60  E-value=5.1e-15  Score=110.83  Aligned_cols=120  Identities=19%  Similarity=0.135  Sum_probs=95.7

Q ss_pred             HhhcCCeeecceecccCCeeEEEEE-EcCCCEEEEEEeecc---CccchhHHHHHHHHHhcccccCCCeeeeecceecCC
Q 039630           30 KIATNGFRTSNKIGEGGFGSVYKGR-LEDGTVVAVNVLSVE---SKQGETEFMSEVASMANINICHENLVKLHGGCIDGP  105 (174)
Q Consensus        30 ~~~~~~~~~~~~lg~G~~g~V~~~~-~~~~~~~avK~~~~~---~~~~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~~~~  105 (174)
                      ....++|++.+.||+|+||.||++. ..++..+|+|+++..   .......+..|+.+++.++  ||||+++++.+...+
T Consensus        39 ~~~~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~--hp~iv~~~~~~~~~~  116 (370)
T cd05621          39 QMKAEDYDVVKVIGRGAFGEVQLVRHKSSQKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFAN--SPWVVQLFCAFQDDK  116 (370)
T ss_pred             CCCHHHCeEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCC--CCCEeeEEEEEEcCC
Confidence            3344679999999999999999999 456889999999643   1223445778999999998  999999999999988


Q ss_pred             CcccchhhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhcc
Q 039630          106 SRILAPLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEI  170 (174)
Q Consensus       106 ~~~lv~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  170 (174)
                      ..++++  ++.+++.+...+.                 ...+++..+..++.|++.||+|||++.
T Consensus       117 ~~~lv~--Ey~~gg~L~~~l~-----------------~~~~~~~~~~~~~~qil~aL~~LH~~~  162 (370)
T cd05621         117 YLYMVM--EYMPGGDLVNLMS-----------------NYDVPEKWAKFYTAEVVLALDAIHSMG  162 (370)
T ss_pred             EEEEEE--cCCCCCcHHHHHH-----------------hcCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            888888  7777777665331                 113678888899999999999999853

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found

>KOG0584 consensus Serine/threonine protein kinase [General function prediction only]

Probab=99.59  E-value=7.3e-16  Score=117.28  Aligned_cols=120  Identities=23%  Similarity=0.342  Sum_probs=93.5

Q ss_pred             eeecceecccCCeeEEEEE-EcCCCEEEEEEeecc----CccchhHHHHHHHHHhcccccCCCeeeeecceecCCCcccc
Q 039630           36 FRTSNKIGEGGFGSVYKGR-LEDGTVVAVNVLSVE----SKQGETEFMSEVASMANINICHENLVKLHGGCIDGPSRILA  110 (174)
Q Consensus        36 ~~~~~~lg~G~~g~V~~~~-~~~~~~~avK~~~~~----~~~~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~~~~~~~lv  110 (174)
                      .+...+||+|+|.+||+|. -.+|..||.-.++..    .+...+.+..|+.+|+.|+  |+||++++..+.+.....+.
T Consensus        42 ~k~~evLGrGafKtVYka~De~~giEVAWnqvk~~d~~q~~~~leR~~~Ev~lLKsL~--H~NIirfy~SW~d~~n~~in  119 (632)
T KOG0584|consen   42 LKFDEVLGRGAFKTVYKAFDEEEGIEVAWNQVKIRDVTQSPEELERLYSEVHLLKSLK--HPNIIRFYDSWVDTDNKTIN  119 (632)
T ss_pred             eehhhhcccccceeeeeccccccchhhHHHHHhHHHhhcChHHHHHHHHHHHHHccCC--CCceeeeeeheecCCCceee
Confidence            4566899999999999999 456777877776644    2344578999999999999  99999999999988764444


Q ss_pred             hhhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhccCCC
Q 039630          111 PLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEIKTT  173 (174)
Q Consensus       111 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~~~~  173 (174)
                      +.-+.+..|.|..+.                .+...+....+..+++||+.||.|||++.||.
T Consensus       120 ~iTEL~TSGtLr~Y~----------------kk~~~vn~kaik~W~RQILkGL~yLHs~~PPI  166 (632)
T KOG0584|consen  120 FITELFTSGTLREYR----------------KKHRRVNIKAIKSWCRQILKGLVYLHSQDPPI  166 (632)
T ss_pred             eeeecccCCcHHHHH----------------HHhccCCHHHHHHHHHHHHHHhhhhhcCCCCc
Confidence            433555555554432                34456788899999999999999999999984

>KOG0588 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=99.59  E-value=2.2e-15  Score=115.56  Aligned_cols=114  Identities=19%  Similarity=0.260  Sum_probs=100.7

Q ss_pred             CeeecceecccCCeeEEEEE-EcCCCEEEEEEeecc---CccchhHHHHHHHHHhcccccCCCeeeeecceecCCCcccc
Q 039630           35 GFRTSNKIGEGGFGSVYKGR-LEDGTVVAVNVLSVE---SKQGETEFMSEVASMANINICHENLVKLHGGCIDGPSRILA  110 (174)
Q Consensus        35 ~~~~~~~lg~G~~g~V~~~~-~~~~~~~avK~~~~~---~~~~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~~~~~~~lv  110 (174)
                      -+++++.||.|+-|.|..|. ..+|+.+|||++..+   .......+.+|+.||+-+.  |||++.+++++....++|++
T Consensus        13 pwkLgkTLG~Gstg~vrlakh~~TGqlaaiKii~k~~~~s~s~~~~IerEIviMkLi~--HpnVl~LydVwe~~~~lylv   90 (786)
T KOG0588|consen   13 PWKLGKTLGKGSTGCVRLAKHAETGQLAAIKIIPKRSELSSSQPAGIEREIVIMKLIE--HPNVLRLYDVWENKQHLYLV   90 (786)
T ss_pred             ceeccccccCCCCceehhhhcccccceeEEEeeccccccccccccchhhhhHHHHHhc--CCCeeeeeeeeccCceEEEE
Confidence            46788999999999999999 889999999999866   2233567999999999999  99999999999999999999


Q ss_pred             hhhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhh
Q 039630          111 PLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHE  168 (174)
Q Consensus       111 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~  168 (174)
                      .  ++.++|.++..+.                .++++++.....+++||+.|+.|+|.
T Consensus        91 l--Eyv~gGELFdylv----------------~kG~l~e~eaa~ff~QIi~gv~yCH~  130 (786)
T KOG0588|consen   91 L--EYVPGGELFDYLV----------------RKGPLPEREAAHFFRQILDGVSYCHA  130 (786)
T ss_pred             E--EecCCchhHHHHH----------------hhCCCCCHHHHHHHHHHHHHHHHHhh
Confidence            9  9999999998763                34568899999999999999999986

>KOG0592 consensus 3-phosphoinositide-dependent protein kinase (PDK1) [Signal transduction mechanisms]

Probab=99.59  E-value=1.8e-15  Score=113.65  Aligned_cols=118  Identities=23%  Similarity=0.248  Sum_probs=99.9

Q ss_pred             CCeeecceecccCCeeEEEEE-EcCCCEEEEEEeecc---CccchhHHHHHHHHHhcccccCCCeeeeecceecCCCccc
Q 039630           34 NGFRTSNKIGEGGFGSVYKGR-LEDGTVVAVNVLSVE---SKQGETEFMSEVASMANINICHENLVKLHGGCIDGPSRIL  109 (174)
Q Consensus        34 ~~~~~~~~lg~G~~g~V~~~~-~~~~~~~avK~~~~~---~~~~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~~~~~~~l  109 (174)
                      ++|..++.||+|+|++|++|+ ..+++.+|+|++.+.   .....+-+..|-.+|..+. .||.|++++-.|.++..+|.
T Consensus        73 ~DF~Fg~~lGeGSYStV~~A~~~~t~keYAiKVl~K~~Iike~KvkYV~~Ek~~l~~L~-~hPgivkLy~TFQD~~sLYF  151 (604)
T KOG0592|consen   73 NDFKFGKILGEGSYSTVVLAREKATGKEYAIKVLDKRYIIKEKKVKYVTREKEALTQLS-GHPGIVKLYFTFQDEESLYF  151 (604)
T ss_pred             hhcchhheeccccceeEEEeeecCCCceeeHhhhhHHHHHhhcccchhhHHHHHHHHhh-CCCCeEEEEEEeecccceEE
Confidence            579999999999999999999 678999999999765   2233455778888899984 49999999999999999998


Q ss_pred             chhhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhcc
Q 039630          110 APLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEI  170 (174)
Q Consensus       110 v~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  170 (174)
                      |+  ++.++|.+...+..                .+.+++.....++.+|+.||+|||++.
T Consensus       152 vL--e~A~nGdll~~i~K----------------~Gsfde~caR~YAAeIldAleylH~~G  194 (604)
T KOG0592|consen  152 VL--EYAPNGDLLDLIKK----------------YGSFDETCARFYAAEILDALEYLHSNG  194 (604)
T ss_pred             EE--EecCCCcHHHHHHH----------------hCcchHHHHHHHHHHHHHHHHHHHhcC
Confidence            88  88888988876533                345788888999999999999999865

>cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5

Probab=99.59  E-value=1.3e-14  Score=104.85  Aligned_cols=117  Identities=20%  Similarity=0.239  Sum_probs=92.2

Q ss_pred             CCeeecceecccCCeeEEEEEE-cCCCEEEEEEeeccC--ccchhHHHHHHHHHhcccccCCCeeeeecceecCCCcccc
Q 039630           34 NGFRTSNKIGEGGFGSVYKGRL-EDGTVVAVNVLSVES--KQGETEFMSEVASMANINICHENLVKLHGGCIDGPSRILA  110 (174)
Q Consensus        34 ~~~~~~~~lg~G~~g~V~~~~~-~~~~~~avK~~~~~~--~~~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~~~~~~~lv  110 (174)
                      ++|.+.+.||+|+||.||++.. .++..+|+|+++...  ......+.+|+.+++.++  |+||+++++.+...+..+++
T Consensus         1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~--h~~iv~~~~~~~~~~~~~lv   78 (287)
T cd07848           1 NKFEVLGVVGEGAYGVVLKCRHKETKEIVAIKKFKDSEENEEVKETTLRELKMLRTLK--QENIVELKEAFRRRGKLYLV   78 (287)
T ss_pred             CCceEEEEecccCCEEEEEEEECCCCcEEEEEEEecccccccchhhHHHHHHHHHhCC--CccccchhhhEecCCEEEEE
Confidence            3688899999999999999994 568899999997542  233556788999999999  99999999999988888888


Q ss_pred             hhhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhcc
Q 039630          111 PLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEI  170 (174)
Q Consensus       111 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  170 (174)
                      +  ++.+.+.+.. +.               .....+++..+..++.|++.||.|||+..
T Consensus        79 ~--e~~~~~~l~~-~~---------------~~~~~~~~~~~~~~~~qi~~~L~~lH~~~  120 (287)
T cd07848          79 F--EYVEKNMLEL-LE---------------EMPNGVPPEKVRSYIYQLIKAIHWCHKND  120 (287)
T ss_pred             E--ecCCCCHHHH-HH---------------hcCCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            8  6655543322 10               11224788888999999999999999754

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes

>cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn

Probab=99.59  E-value=1.1e-14  Score=103.88  Aligned_cols=121  Identities=24%  Similarity=0.325  Sum_probs=95.9

Q ss_pred             hhcCCeeecceecccCCeeEEEEEEcCCCEEEEEEeeccCccchhHHHHHHHHHhcccccCCCeeeeecceecCCCcccc
Q 039630           31 IATNGFRTSNKIGEGGFGSVYKGRLEDGTVVAVNVLSVESKQGETEFMSEVASMANINICHENLVKLHGGCIDGPSRILA  110 (174)
Q Consensus        31 ~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~avK~~~~~~~~~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~~~~~~~lv  110 (174)
                      +..++|++.+.||+|+||.||++...++..+++|.+... ....+.+..|+.+++.++  |+|++++++.+...+..+++
T Consensus         3 ~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~v~iK~~~~~-~~~~~~~~~e~~~l~~l~--h~~i~~~~~~~~~~~~~~lv   79 (261)
T cd05072           3 IPRESIKLVKKLGAGQFGEVWMGYYNNSTKVAVKTLKPG-TMSVQAFLEEANLMKTLQ--HDKLVRLYAVVTKEEPIYII   79 (261)
T ss_pred             CchHHeEEeeecCCcCCceEEEEEecCCceEEEEEccCC-chhHHHHHHHHHHHHhCC--CCCeeeEEEEEcCCCCcEEE
Confidence            345678999999999999999999777888999988643 234567889999999999  99999999999888888888


Q ss_pred             hhhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhcc
Q 039630          111 PLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEI  170 (174)
Q Consensus       111 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  170 (174)
                      +  ++..++.+...+..              .....+++..+..++.|++.||+|||+..
T Consensus        80 ~--e~~~~~~L~~~l~~--------------~~~~~~~~~~~~~~~~~l~~~l~~LH~~~  123 (261)
T cd05072          80 T--EYMAKGSLLDFLKS--------------DEGGKVLLPKLIDFSAQIAEGMAYIERKN  123 (261)
T ss_pred             E--ecCCCCcHHHHHHH--------------hcCCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            8  66666665543211              11224678888899999999999999854

Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa

>KOG1025 consensus Epidermal growth factor receptor EGFR and related tyrosine kinases [Signal transduction mechanisms]

Probab=99.59  E-value=3.7e-15  Score=116.96  Aligned_cols=113  Identities=28%  Similarity=0.473  Sum_probs=90.4

Q ss_pred             eecceecccCCeeEEEEEE-cCC----CEEEEEEeecc-CccchhHHHHHHHHHhcccccCCCeeeeecceecCCCcccc
Q 039630           37 RTSNKIGEGGFGSVYKGRL-EDG----TVVAVNVLSVE-SKQGETEFMSEVASMANINICHENLVKLHGGCIDGPSRILA  110 (174)
Q Consensus        37 ~~~~~lg~G~~g~V~~~~~-~~~----~~~avK~~~~~-~~~~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~~~~~~~lv  110 (174)
                      +..++||.|+||+||+|.| +.|    .+||+|++... ..+...+++.|+-+|.+++  |+|+++++|+|.... ..+|
T Consensus       699 kk~kvLGsgAfGtV~kGiw~Pege~vKipVaiKvl~~~t~~~~s~e~LdeAl~masld--Hpnl~RLLgvc~~s~-~qlv  775 (1177)
T KOG1025|consen  699 KKDKVLGSGAFGTVYKGIWIPEGENVKIPVAIKVLIEFTSPKASIELLDEALRMASLD--HPNLLRLLGVCMLST-LQLV  775 (1177)
T ss_pred             hhhceeccccceeEEeeeEecCCceecceeEEEEeeccCCchhhHHHHHHHHHHhcCC--CchHHHHhhhcccch-HHHH
Confidence            4458999999999999994 434    48999998755 4556778999999999999  999999999998765 5555


Q ss_pred             hhhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhc
Q 039630          111 PLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEE  169 (174)
Q Consensus       111 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~  169 (174)
                      .  ++++.+.|..++               ...+..+.....+.+++|||+||.|||.+
T Consensus       776 t--q~mP~G~LlDyv---------------r~hr~~igsq~lLnw~~QIAkgM~YLe~q  817 (1177)
T KOG1025|consen  776 T--QLMPLGCLLDYV---------------REHRDNIGSQDLLNWCYQIAKGMKYLEEQ  817 (1177)
T ss_pred             H--HhcccchHHHHH---------------HHhhccccHHHHHHHHHHHHHHHHHHHhc
Confidence            5  666666666654               23444678899999999999999999875

>cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma

Probab=99.59  E-value=8.8e-15  Score=107.87  Aligned_cols=111  Identities=23%  Similarity=0.242  Sum_probs=89.9

Q ss_pred             ceecccCCeeEEEEE-EcCCCEEEEEEeecc---CccchhHHHHHHHHHhcccccCCCeeeeecceecCCCcccchhhhh
Q 039630           40 NKIGEGGFGSVYKGR-LEDGTVVAVNVLSVE---SKQGETEFMSEVASMANINICHENLVKLHGGCIDGPSRILAPLQAS  115 (174)
Q Consensus        40 ~~lg~G~~g~V~~~~-~~~~~~~avK~~~~~---~~~~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~~~~~~~lv~~~~~  115 (174)
                      +.||+|+||.||++. ..++..+|+|++...   .......+.+|+.+++.++  |+||+++.+.+...+..++|+  ++
T Consensus         1 ~~lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~--hp~iv~~~~~~~~~~~~~lv~--Ey   76 (328)
T cd05593           1 KLLGKGTFGKVILVREKASGKYYAMKILKKEVIIAKDEVAHTLTESRVLKNTR--HPFLTSLKYSFQTKDRLCFVM--EY   76 (328)
T ss_pred             CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCC--CCCCcceEEEEEcCCEEEEEE--eC
Confidence            368999999999998 567899999999754   2234556788999999999  999999999999998888888  77


Q ss_pred             hhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhcc
Q 039630          116 IEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEI  170 (174)
Q Consensus       116 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  170 (174)
                      .+++.+...+.                ....+++..+..++.|++.||+|||++.
T Consensus        77 ~~~g~L~~~l~----------------~~~~l~~~~~~~~~~qi~~aL~~LH~~~  115 (328)
T cd05593          77 VNGGELFFHLS----------------RERVFSEDRTRFYGAEIVSALDYLHSGK  115 (328)
T ss_pred             CCCCCHHHHHH----------------hcCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            77776655331                1234788899999999999999999863

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate

>KOG0199 consensus ACK and related non-receptor tyrosine kinases [Signal transduction mechanisms]

Probab=99.59  E-value=3.3e-15  Score=115.51  Aligned_cols=116  Identities=24%  Similarity=0.381  Sum_probs=91.1

Q ss_pred             CeeecceecccCCeeEEEEEEcC--C--CEEEEEEeeccCcc-chhHHHHHHHHHhcccccCCCeeeeecceecCCCccc
Q 039630           35 GFRTSNKIGEGGFGSVYKGRLED--G--TVVAVNVLSVESKQ-GETEFMSEVASMANINICHENLVKLHGGCIDGPSRIL  109 (174)
Q Consensus        35 ~~~~~~~lg~G~~g~V~~~~~~~--~--~~~avK~~~~~~~~-~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~~~~~~~l  109 (174)
                      .+.+.+.||+|.||.|++|.|..  |  ..||||+++..... ...+|++|+.+|.+++  |+|++++||++.+ ....+
T Consensus       111 ~i~l~e~LG~GsFgvV~rg~Wt~psgk~V~VAVKclr~d~l~~~mddflrEas~M~~L~--H~hliRLyGvVl~-qp~mM  187 (1039)
T KOG0199|consen  111 QIKLYELLGEGSFGVVKRGTWTQPSGKHVNVAVKCLRDDSLNAIMDDFLREASHMLKLQ--HPHLIRLYGVVLD-QPAMM  187 (1039)
T ss_pred             HHHHHHHhcCcceeeEeeccccCCCCcEEeEEEEeccCCccchhHHHHHHHHHHHHhcc--CcceeEEeeeecc-chhhH
Confidence            45566899999999999999742  3  37899999866433 6778999999999999  9999999999987 44556


Q ss_pred             chhhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhc
Q 039630          110 APLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEE  169 (174)
Q Consensus       110 v~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~  169 (174)
                      |+  |..+.+.|...+..              .....+....+..++.|||.||.||.++
T Consensus       188 V~--ELaplGSLldrLrk--------------a~~~~llv~~Lcdya~QiA~aM~YLesk  231 (1039)
T KOG0199|consen  188 VF--ELAPLGSLLDRLRK--------------AKKAILLVSRLCDYAMQIAKAMQYLESK  231 (1039)
T ss_pred             Hh--hhcccchHHHHHhh--------------ccccceeHHHHHHHHHHHHHHHHHHhhh
Confidence            66  77777777764421              1233567788889999999999999664

>cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1

Probab=99.59  E-value=6.3e-15  Score=110.38  Aligned_cols=124  Identities=20%  Similarity=0.151  Sum_probs=97.6

Q ss_pred             hhhHHhhcCCeeecceecccCCeeEEEEE-EcCCCEEEEEEeeccC---ccchhHHHHHHHHHhcccccCCCeeeeecce
Q 039630           26 YNELKIATNGFRTSNKIGEGGFGSVYKGR-LEDGTVVAVNVLSVES---KQGETEFMSEVASMANINICHENLVKLHGGC  101 (174)
Q Consensus        26 ~~~~~~~~~~~~~~~~lg~G~~g~V~~~~-~~~~~~~avK~~~~~~---~~~~~~~~~e~~~l~~l~~~h~~i~~~~~~~  101 (174)
                      ..++....++|++.+.||+|+||.||++. ..+++.+|+|+++...   ......+.+|+.++..++  ||||+++++.+
T Consensus        35 ~~~~~~~~~~y~i~~~lG~G~fg~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~i~~~~~--hp~iv~~~~~~  112 (371)
T cd05622          35 IRDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFAN--SPWVVQLFYAF  112 (371)
T ss_pred             HhhcCcchhhcEEEEEEeecCCeEEEEEEECCCCcEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCC--CCCCCeEEEEE
Confidence            34455566789999999999999999999 4578899999996431   223445778899999998  99999999999


Q ss_pred             ecCCCcccchhhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhcc
Q 039630          102 IDGPSRILAPLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEI  170 (174)
Q Consensus       102 ~~~~~~~lv~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  170 (174)
                      ...+..++++  ++.+++.|...+.                 ...+++..+..++.|++.||.|||++.
T Consensus       113 ~~~~~~~lv~--Ey~~gg~L~~~~~-----------------~~~~~~~~~~~~~~qi~~aL~~LH~~~  162 (371)
T cd05622         113 QDDRYLYMVM--EYMPGGDLVNLMS-----------------NYDVPEKWARFYTAEVVLALDAIHSMG  162 (371)
T ss_pred             EcCCEEEEEE--cCCCCCcHHHHHH-----------------hcCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            9888888888  7776666654321                 123677888889999999999999863

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an

>cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6

Probab=99.59  E-value=1.1e-14  Score=104.00  Aligned_cols=121  Identities=19%  Similarity=0.264  Sum_probs=93.6

Q ss_pred             CCeeecceecccCCeeEEEEE-EcCCCEEEEEEeeccC---ccchhHHHHHHHHHhcccccCCCeeeeecceecCCCccc
Q 039630           34 NGFRTSNKIGEGGFGSVYKGR-LEDGTVVAVNVLSVES---KQGETEFMSEVASMANINICHENLVKLHGGCIDGPSRIL  109 (174)
Q Consensus        34 ~~~~~~~~lg~G~~g~V~~~~-~~~~~~~avK~~~~~~---~~~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~~~~~~~l  109 (174)
                      ++|++.+.||+|+||.||++. ..++..+|+|.++...   ......+.+|+.+++.++  |+|++++++.+...+..++
T Consensus         2 ~~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~--h~~i~~~~~~~~~~~~~~~   79 (267)
T cd08228           2 ANFQIEKKIGRGQFSEVYRATCLLDRKPVALKKVQIFEMMDAKARQDCVKEIDLLKQLN--HPNVIKYLDSFIEDNELNI   79 (267)
T ss_pred             cceeeeeeeccCCCeeEEEEEEeCCCCEEEEEEeeccccCCHHHHHHHHHHHHHHHhCC--CcceeeeeeeEEECCeEEE
Confidence            468889999999999999999 5578999999886432   233456888999999999  9999999999998888888


Q ss_pred             chhhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhcc
Q 039630          110 APLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEI  170 (174)
Q Consensus       110 v~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  170 (174)
                      ++  ++.+++.+...+...            ......++...+..++.|++.||+|||++.
T Consensus        80 v~--e~~~~~~L~~~~~~~------------~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~  126 (267)
T cd08228          80 VL--ELADAGDLSQMIKYF------------KKQKRLIPERTVWKYFVQLCSAVEHMHSRR  126 (267)
T ss_pred             EE--EecCCCcHHHHHHHh------------hhccCCCCHHHHHHHHHHHHHHHHHHhhCC
Confidence            88  666655554322110            112234688888999999999999999864

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase

>cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase

Probab=99.58  E-value=2.2e-14  Score=104.83  Aligned_cols=117  Identities=24%  Similarity=0.322  Sum_probs=91.1

Q ss_pred             CCeeecceecccCCeeEEEEE-EcCCCEEEEEEeeccC-ccchhHHHHHHHHHhcccccCCCeeeeecceecCCCcccch
Q 039630           34 NGFRTSNKIGEGGFGSVYKGR-LEDGTVVAVNVLSVES-KQGETEFMSEVASMANINICHENLVKLHGGCIDGPSRILAP  111 (174)
Q Consensus        34 ~~~~~~~~lg~G~~g~V~~~~-~~~~~~~avK~~~~~~-~~~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~~~~~~~lv~  111 (174)
                      ++|...+.||+|+||.||++. ..++..+|+|.++... ......+.+|+.+++.++  |+|++++++.+...+..++++
T Consensus         6 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~--h~~iv~~~~~~~~~~~~~lv~   83 (309)
T cd07872           6 ETYIKLEKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEGAPCTAIREVSLLKDLK--HANIVTLHDIVHTDKSLTLVF   83 (309)
T ss_pred             CceEEEEEecccCCEEEEEEEecCCCCeEEEEEeeccccCCcchhHHHHHHHHHhCC--CCCcceEEEEEeeCCeEEEEE
Confidence            568899999999999999998 4568899999997553 233445778999999999  999999999999988888888


Q ss_pred             hhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhcc
Q 039630          112 LQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEI  170 (174)
Q Consensus       112 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  170 (174)
                        ++.+. .+...+.               .....+++..+..++.|++.||+|||++.
T Consensus        84 --e~~~~-~l~~~~~---------------~~~~~~~~~~~~~~~~qi~~aL~~lH~~~  124 (309)
T cd07872          84 --EYLDK-DLKQYMD---------------DCGNIMSMHNVKIFLYQILRGLAYCHRRK  124 (309)
T ss_pred             --eCCCC-CHHHHHH---------------hcCCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence              55443 2322110               11224678888889999999999999864

Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play

>cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase

Probab=99.58  E-value=1.2e-14  Score=107.16  Aligned_cols=118  Identities=17%  Similarity=0.143  Sum_probs=94.5

Q ss_pred             CCeeecceecccCCeeEEEEE-EcCCCEEEEEEeeccC---ccchhHHHHHHHHHhcccccCCCeeeeecceecCCCccc
Q 039630           34 NGFRTSNKIGEGGFGSVYKGR-LEDGTVVAVNVLSVES---KQGETEFMSEVASMANINICHENLVKLHGGCIDGPSRIL  109 (174)
Q Consensus        34 ~~~~~~~~lg~G~~g~V~~~~-~~~~~~~avK~~~~~~---~~~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~~~~~~~l  109 (174)
                      ++|.+.+.||+|+||.||++. ..++..+|+|+++...   ......+..|+.++..++  |+|++++.+.+...+..++
T Consensus         1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~--~~~i~~~~~~~~~~~~~~l   78 (330)
T cd05601           1 KDFDVKSLVGRGHFGEVQVVREKATGDIYAMKVMKKSVLLAQETVSFFEEERDILSISN--SPWIPQLQYAFQDKDNLYL   78 (330)
T ss_pred             CCceEEEEEEeccCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCC--CCCCcceeeEEecCCeEEE
Confidence            368889999999999999998 5578899999997542   223456788999999988  9999999999998888888


Q ss_pred             chhhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhcc
Q 039630          110 APLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEI  170 (174)
Q Consensus       110 v~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  170 (174)
                      ++  ++.+++.+...+..               ....+++..+..++.|++.||.|||++.
T Consensus        79 v~--e~~~~~~L~~~l~~---------------~~~~l~~~~~~~~~~qi~~aL~~lH~~~  122 (330)
T cd05601          79 VM--EYQPGGDLLSLLNR---------------YEDQFDEDMAQFYLAELVLAIHSVHQMG  122 (330)
T ss_pred             EE--CCCCCCCHHHHHHH---------------hcCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            88  77777766553311               1134788888899999999999999853

Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor

>cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor

Probab=99.58  E-value=1.3e-14  Score=108.78  Aligned_cols=94  Identities=22%  Similarity=0.389  Sum_probs=74.6

Q ss_pred             hHHhhcCCeeecceecccCCeeEEEEEE-c-----CCCEEEEEEeeccC-ccchhHHHHHHHHHhcc-cccCCCeeeeec
Q 039630           28 ELKIATNGFRTSNKIGEGGFGSVYKGRL-E-----DGTVVAVNVLSVES-KQGETEFMSEVASMANI-NICHENLVKLHG   99 (174)
Q Consensus        28 ~~~~~~~~~~~~~~lg~G~~g~V~~~~~-~-----~~~~~avK~~~~~~-~~~~~~~~~e~~~l~~l-~~~h~~i~~~~~   99 (174)
                      .|....++|.+.+.||+|+||.||++.. .     ++..||+|.++... ......+.+|+.+++.+ +  |+||+++++
T Consensus        32 ~~~~~~~~~~~~~~LG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l~~--h~nIv~~~~  109 (374)
T cd05106          32 KWEFPRDNLQFGKTLGAGAFGKVVEATAFGLGKEDNVLRVAVKMLKASAHTDEREALMSELKILSHLGQ--HKNIVNLLG  109 (374)
T ss_pred             cccccHHHceehheecCCCcccEEEEEEecCCcccccceeEEEeccCCCCHHHHHHHHHHHHHHHhhcc--CCceeeEee
Confidence            4555667899999999999999999873 2     23579999997553 33455688999999998 6  999999999


Q ss_pred             ceecCCCcccchhhhhhhhhhhhhhh
Q 039630          100 GCIDGPSRILAPLQASIEALFLFTKL  125 (174)
Q Consensus       100 ~~~~~~~~~lv~~~~~~~~~~l~~~~  125 (174)
                      .+...+..++++  ++...+.+...+
T Consensus       110 ~~~~~~~~~lv~--ey~~~g~L~~~l  133 (374)
T cd05106         110 ACTHGGPVLVIT--EYCCYGDLLNFL  133 (374)
T ss_pred             EecCCCCeEEeH--hhccCCcHHHHH
Confidence            999999988888  777766665543

Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti

>KOG0032 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]

Probab=99.58  E-value=1.8e-14  Score=107.45  Aligned_cols=119  Identities=24%  Similarity=0.327  Sum_probs=101.0

Q ss_pred             hcCCeeecceecccCCeeEEEEE-EcCCCEEEEEEeeccCc---cchhHHHHHHHHHhcccccCCCeeeeecceecCCCc
Q 039630           32 ATNGFRTSNKIGEGGFGSVYKGR-LEDGTVVAVNVLSVESK---QGETEFMSEVASMANINICHENLVKLHGGCIDGPSR  107 (174)
Q Consensus        32 ~~~~~~~~~~lg~G~~g~V~~~~-~~~~~~~avK~~~~~~~---~~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~~~~~~  107 (174)
                      ....|.+.+.||+|.||.||.|. ..+|..+|+|++++...   .....+.+|+.+|+++. .|||++.+.+.+.+.+..
T Consensus        33 ~~~~Y~l~~~lG~G~Fg~v~~~~~~~tg~~~A~K~i~k~~~~~~~~~~~v~~Ev~il~~l~-~hpniv~l~~~~e~~~~~  111 (382)
T KOG0032|consen   33 IKEKYELGRELGRGQFGVVYLCREKSTGKEVACKVIPKRKLRGKEDREDVRREVAILQQLS-GHPNIVQLKDAFEDPDSV  111 (382)
T ss_pred             ccccEEehhhhCCCCceEEEEEEecCCCceeEEEEeehhhccccccHHHHHHHHHHHHhcc-CCCCEEEEEEEEEcCCeE
Confidence            34569999999999999999999 56699999999986633   24568999999999997 699999999999999998


Q ss_pred             ccchhhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhcc
Q 039630          108 ILAPLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEI  170 (174)
Q Consensus       108 ~lv~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  170 (174)
                      ++|+  +...++.++......                 .+++.....++.|++.++.|||+..
T Consensus       112 ~lvm--EL~~GGeLfd~i~~~-----------------~~sE~da~~~~~~il~av~~lH~~g  155 (382)
T KOG0032|consen  112 YLVM--ELCEGGELFDRIVKK-----------------HYSERDAAGIIRQILEAVKYLHSLG  155 (382)
T ss_pred             EEEE--EecCCchHHHHHHHc-----------------cCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            8888  888888888754221                 2789999999999999999999854

>KOG4236 consensus Serine/threonine protein kinase PKC mu/PKD and related proteins [Signal transduction mechanisms]

Probab=99.58  E-value=1.2e-14  Score=109.62  Aligned_cols=112  Identities=22%  Similarity=0.322  Sum_probs=93.7

Q ss_pred             cceecccCCeeEEEEE-EcCCCEEEEEEeecc--CccchhHHHHHHHHHhcccccCCCeeeeecceecCCCcccchhhhh
Q 039630           39 SNKIGEGGFGSVYKGR-LEDGTVVAVNVLSVE--SKQGETEFMSEVASMANINICHENLVKLHGGCIDGPSRILAPLQAS  115 (174)
Q Consensus        39 ~~~lg~G~~g~V~~~~-~~~~~~~avK~~~~~--~~~~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~~~~~~~lv~~~~~  115 (174)
                      -++||+|.||.||-|. .++|+.||||++.+.  ..+....+..|+.||.++.  ||.|+.+.-.|.+++..++||+...
T Consensus       569 devLGSGQFG~VYgg~hRktGrdVAvKvIdKlrFp~kqesqlR~EVaILq~l~--HPGiV~le~M~ET~ervFVVMEKl~  646 (888)
T KOG4236|consen  569 DEVLGSGQFGTVYGGKHRKTGRDVAVKVIDKLRFPTKQESQLRNEVAILQNLH--HPGIVNLECMFETPERVFVVMEKLH  646 (888)
T ss_pred             HhhccCCcceeeecceecccCceeeeeeeecccCCCchHHHHHHHHHHHHhcC--CCCeeEEEEeecCCceEEEEehhhc
Confidence            5799999999999999 788999999999765  3445577899999999999  9999999999999999999994444


Q ss_pred             hhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhc
Q 039630          116 IEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEE  169 (174)
Q Consensus       116 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~  169 (174)
                      .+.+.++.                 ..+..++++.....+..||+.||.|||.+
T Consensus       647 GDMLEMIL-----------------SsEkgRL~er~TkFlvtQIL~ALr~LH~k  683 (888)
T KOG4236|consen  647 GDMLEMIL-----------------SSEKGRLPERITKFLVTQILVALRYLHFK  683 (888)
T ss_pred             chHHHHHH-----------------HhhcccchHHHHHHHHHHHHHHHHHhhhc
Confidence            44444333                 34556789988888999999999999975

>cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2

Probab=99.58  E-value=7.3e-15  Score=105.68  Aligned_cols=111  Identities=23%  Similarity=0.375  Sum_probs=86.2

Q ss_pred             eecccCCeeEEEEEEcC-------------------------CCEEEEEEeeccCccchhHHHHHHHHHhcccccCCCee
Q 039630           41 KIGEGGFGSVYKGRLED-------------------------GTVVAVNVLSVESKQGETEFMSEVASMANINICHENLV   95 (174)
Q Consensus        41 ~lg~G~~g~V~~~~~~~-------------------------~~~~avK~~~~~~~~~~~~~~~e~~~l~~l~~~h~~i~   95 (174)
                      .||+|+||.||+|....                         ...+++|.+..........+..|+.+++.++  |+||+
T Consensus         2 ~lG~G~~~~vy~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~~~~~~~l~--h~niv   79 (274)
T cd05076           2 HLGQGTRTNIYDGRLRVEGGGEPEEDEMEDEDPLVEGNNNGRELRVVLKVLDPSHRDIALAFFETASLMSQVS--HIHLA   79 (274)
T ss_pred             CcCcccccceecceeEeccCCCCcccccccccccccccCCCeeeeEEEEecChHHHHHHHHHHHHHHHHhcCC--CCCee
Confidence            68999999999987311                         1368888886554444556888899999999  99999


Q ss_pred             eeecceecCCCcccchhhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhcc
Q 039630           96 KLHGGCIDGPSRILAPLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEI  170 (174)
Q Consensus        96 ~~~~~~~~~~~~~lv~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  170 (174)
                      ++++.+...+..++|+  ++.+++.+...+.               .....+++..+..++.|++.||+|||++.
T Consensus        80 ~~~~~~~~~~~~~lv~--ey~~~g~L~~~l~---------------~~~~~~~~~~~~~i~~qi~~~l~~lH~~~  137 (274)
T cd05076          80 FVHGVCVRGSENIMVE--EFVEHGPLDVCLR---------------KEKGRVPVAWKITVAQQLASALSYLEDKN  137 (274)
T ss_pred             eEEEEEEeCCceEEEE--ecCCCCcHHHHHH---------------hcCCCCCHHHHHHHHHHHHHHHHHHHcCC
Confidence            9999999988888888  7777776654321               12234788888999999999999999864

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt

>cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes

Probab=99.58  E-value=1.5e-14  Score=102.60  Aligned_cols=112  Identities=23%  Similarity=0.370  Sum_probs=89.1

Q ss_pred             ceecccCCeeEEEEE-EcCCCEEEEEEeeccC-ccchhHHHHHHHHHhcccccCCCeeeeecceecCCCcccchhhhhhh
Q 039630           40 NKIGEGGFGSVYKGR-LEDGTVVAVNVLSVES-KQGETEFMSEVASMANINICHENLVKLHGGCIDGPSRILAPLQASIE  117 (174)
Q Consensus        40 ~~lg~G~~g~V~~~~-~~~~~~~avK~~~~~~-~~~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~~~~~~~lv~~~~~~~  117 (174)
                      +.||+|+||.||++. ..++..+++|.+.... .+....+.+|+.+++.++  |+|++++++.+...+..++++  ++..
T Consensus         1 ~~lg~g~~g~vy~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~e~~~l~~l~--h~~i~~~~~~~~~~~~~~lv~--e~~~   76 (252)
T cd05084           1 ERIGRGNFGEVFSGRLRADNTPVAVKSCRETLPPDLKAKFLQEARILKQYS--HPNIVRLIGVCTQKQPIYIVM--ELVQ   76 (252)
T ss_pred             CccCcccCccEEEEEEecCCceEEEEecCccCCHHHHHHHHHHHHHHHhCC--CCCcceEEEEEcCCCCeEEEE--eecc
Confidence            468999999999998 4578899999886442 334567899999999999  999999999999888888888  6666


Q ss_pred             hhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhcc
Q 039630          118 ALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEI  170 (174)
Q Consensus       118 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  170 (174)
                      ++.+...+.               .....+++..++.++.|++.||.|||++.
T Consensus        77 ~~~L~~~~~---------------~~~~~~~~~~~~~~~~qi~~~L~~lH~~~  114 (252)
T cd05084          77 GGDFLTFLR---------------TEGPRLKVKELIQMVENAAAGMEYLESKH  114 (252)
T ss_pred             CCcHHHHHH---------------hCCCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            666554321               11234788889999999999999999764

Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular

>PLN00034 mitogen-activated protein kinase kinase; Provisional

Probab=99.58  E-value=6.1e-15  Score=109.71  Aligned_cols=113  Identities=22%  Similarity=0.252  Sum_probs=88.7

Q ss_pred             CCeeecceecccCCeeEEEEE-EcCCCEEEEEEeeccC-ccchhHHHHHHHHHhcccccCCCeeeeecceecCCCcccch
Q 039630           34 NGFRTSNKIGEGGFGSVYKGR-LEDGTVVAVNVLSVES-KQGETEFMSEVASMANINICHENLVKLHGGCIDGPSRILAP  111 (174)
Q Consensus        34 ~~~~~~~~lg~G~~g~V~~~~-~~~~~~~avK~~~~~~-~~~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~~~~~~~lv~  111 (174)
                      .+|..++.||+|+||.||++. ..+++.||+|++.... ......+.+|+.+++.++  |+||+++++.+...+..++++
T Consensus        74 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~--h~~iv~~~~~~~~~~~~~lv~  151 (353)
T PLN00034         74 SELERVNRIGSGAGGTVYKVIHRPTGRLYALKVIYGNHEDTVRRQICREIEILRDVN--HPNVVKCHDMFDHNGEIQVLL  151 (353)
T ss_pred             HHHhhhhhccCCCCeEEEEEEECCCCCEEEEEEEecCCcHHHHHHHHHHHHHHHhCC--CCCcceeeeEeccCCeEEEEE
Confidence            457778899999999999998 4578999999996543 233457889999999999  999999999998888777777


Q ss_pred             hhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhcc
Q 039630          112 LQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEI  170 (174)
Q Consensus       112 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  170 (174)
                        ++.+++.+..                    .....+..+..++.||+.||.|||++.
T Consensus       152 --e~~~~~~L~~--------------------~~~~~~~~~~~i~~qi~~aL~~LH~~~  188 (353)
T PLN00034        152 --EFMDGGSLEG--------------------THIADEQFLADVARQILSGIAYLHRRH  188 (353)
T ss_pred             --ecCCCCcccc--------------------cccCCHHHHHHHHHHHHHHHHHHHHCC
Confidence              5555444321                    112456777889999999999999864

>cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta

Probab=99.58  E-value=1.7e-14  Score=106.54  Aligned_cols=118  Identities=19%  Similarity=0.135  Sum_probs=93.7

Q ss_pred             CCeeecceecccCCeeEEEEE-EcCCCEEEEEEeecc---CccchhHHHHHHHHHhcccccCCCeeeeecceecCCCccc
Q 039630           34 NGFRTSNKIGEGGFGSVYKGR-LEDGTVVAVNVLSVE---SKQGETEFMSEVASMANINICHENLVKLHGGCIDGPSRIL  109 (174)
Q Consensus        34 ~~~~~~~~lg~G~~g~V~~~~-~~~~~~~avK~~~~~---~~~~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~~~~~~~l  109 (174)
                      ++|.+.+.||+|+||.||++. ..++..+|+|++...   .......+..|+.++..++  |++|+.+.+.+...+..++
T Consensus         1 d~y~i~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~--~~~i~~l~~~~~~~~~~~l   78 (331)
T cd05624           1 DDFEIIKVIGRGAFGEVAVVKMKHTERIYAMKILNKWEMLKRAETACFREERNVLVNGD--CQWITTLHYAFQDENYLYL   78 (331)
T ss_pred             CCceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHHHhhHHHHHHHHHHHHHHhCC--CCCEeeEEEEEEcCCEEEE
Confidence            368889999999999999998 456889999999743   1223445778889999988  9999999999999988888


Q ss_pred             chhhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhcc
Q 039630          110 APLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEI  170 (174)
Q Consensus       110 v~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  170 (174)
                      ++  ++..++.|...+..               ....+++..+..++.|++.||+|||++.
T Consensus        79 v~--Ey~~gg~L~~~l~~---------------~~~~l~~~~~~~~~~qi~~~L~~lH~~~  122 (331)
T cd05624          79 VM--DYYVGGDLLTLLSK---------------FEDRLPEDMARFYIAEMVLAIHSIHQLH  122 (331)
T ss_pred             EE--eCCCCCcHHHHHHH---------------hcCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            88  77777776654311               1224688888889999999999999753

Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues.

>cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases

Probab=99.58  E-value=2.5e-14  Score=102.02  Aligned_cols=121  Identities=22%  Similarity=0.343  Sum_probs=96.8

Q ss_pred             hhcCCeeecceecccCCeeEEEEEEcCCCEEEEEEeeccCccchhHHHHHHHHHhcccccCCCeeeeecceecCCCcccc
Q 039630           31 IATNGFRTSNKIGEGGFGSVYKGRLEDGTVVAVNVLSVESKQGETEFMSEVASMANINICHENLVKLHGGCIDGPSRILA  110 (174)
Q Consensus        31 ~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~avK~~~~~~~~~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~~~~~~~lv  110 (174)
                      ...++|+..+.||+|++|.||++...++..+++|.++... .....+.+|+.++++++  |+|++++++.+...+..+++
T Consensus         3 ~~~~~~~~~~~lg~g~~~~v~~~~~~~~~~v~iK~~~~~~-~~~~~~~~e~~~l~~l~--h~~i~~~~~~~~~~~~~~lv   79 (261)
T cd05068           3 IDRTSIQLLRKLGAGQFGEVWEGLWNNTTPVAVKTLKPGT-MDPKDFLAEAQIMKKLR--HPKLIQLYAVCTLEEPIYIV   79 (261)
T ss_pred             cchhheeeEEEecccCCccEEEEEecCCeEEEEEeeCCCc-ccHHHHHHHHHHHHHCC--CCCccceeEEEecCCCeeee
Confidence            4556789999999999999999987677889999987442 34567889999999999  99999999999888888888


Q ss_pred             hhhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhcc
Q 039630          111 PLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEI  170 (174)
Q Consensus       111 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  170 (174)
                      +  ++.+++.+...+..              .....+++..+..++.|++.|+.|||++.
T Consensus        80 ~--e~~~~~~L~~~~~~--------------~~~~~~~~~~~~~~~~~i~~~l~~lH~~~  123 (261)
T cd05068          80 T--ELMKYGSLLEYLQG--------------GAGRALKLPQLIDMAAQVASGMAYLEAQN  123 (261)
T ss_pred             e--ecccCCcHHHHHhc--------------cCCCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            7  66666666553311              11224788899999999999999999864

Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a

>cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase

Probab=99.58  E-value=1.2e-14  Score=105.40  Aligned_cols=122  Identities=20%  Similarity=0.268  Sum_probs=97.8

Q ss_pred             HhhcCCeeecceecccCCeeEEEEEE-cCCCEEEEEEeeccCccchhHHHHHHHHHhcccccCCCeeeeecceecCCCcc
Q 039630           30 KIATNGFRTSNKIGEGGFGSVYKGRL-EDGTVVAVNVLSVESKQGETEFMSEVASMANINICHENLVKLHGGCIDGPSRI  108 (174)
Q Consensus        30 ~~~~~~~~~~~~lg~G~~g~V~~~~~-~~~~~~avK~~~~~~~~~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~~~~~~~  108 (174)
                      ..+.+.|++++.||.|+||.||++.. .++..+++|.+..........+..|+.+++.++  |+|++++.+.+...+..+
T Consensus         8 ~~~~~~y~i~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~--h~~i~~~~~~~~~~~~~~   85 (292)
T cd06644           8 LDPNEVWEIIGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYMVEIEILATCN--HPYIVKLLGAFYWDGKLW   85 (292)
T ss_pred             cCcchhhhhhheecCCCCeEEEEEEECCCCceEEEEEeccCCHHHHHHHHHHHHHHHhCC--CCcEeeeEEEEEeCCeEE
Confidence            34456789999999999999999984 568899999997665556677889999999999  999999999998888888


Q ss_pred             cchhhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhcc
Q 039630          109 LAPLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEI  170 (174)
Q Consensus       109 lv~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  170 (174)
                      +++  ++.+++.+...+.               .....+++..+..++.|++.||+|||++.
T Consensus        86 lv~--e~~~~~~l~~~~~---------------~~~~~l~~~~~~~~~~ql~~~l~~lH~~~  130 (292)
T cd06644          86 IMI--EFCPGGAVDAIML---------------ELDRGLTEPQIQVICRQMLEALQYLHSMK  130 (292)
T ss_pred             EEE--ecCCCCcHHHHHH---------------hhcCCCCHHHHHHHHHHHHHHHHHHhcCC
Confidence            888  6666665543221               11224788899999999999999999853

Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types.

>cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors

Probab=99.58  E-value=1.9e-14  Score=104.21  Aligned_cols=138  Identities=20%  Similarity=0.277  Sum_probs=100.9

Q ss_pred             hHHhhcCCeeecceecccCCeeEEEEEEc------CCCEEEEEEeecc-CccchhHHHHHHHHHhcc-cccCCCeeeeec
Q 039630           28 ELKIATNGFRTSNKIGEGGFGSVYKGRLE------DGTVVAVNVLSVE-SKQGETEFMSEVASMANI-NICHENLVKLHG   99 (174)
Q Consensus        28 ~~~~~~~~~~~~~~lg~G~~g~V~~~~~~------~~~~~avK~~~~~-~~~~~~~~~~e~~~l~~l-~~~h~~i~~~~~   99 (174)
                      ++....++|...+.||+|+||.||++...      ....+++|.+... .......+.+|+.++..+ +  |+|++++++
T Consensus         6 ~~~~~~~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~~--h~~i~~~~~   83 (293)
T cd05053           6 EWELPRDRLTLGKPLGEGAFGQVVKAEAVGLDNPNETSTVAVKMLKDDATEKDLSDLVSEMEMMKMIGK--HKNIINLLG   83 (293)
T ss_pred             ccccCHhHeEEeeEecccccccEEEEEEecCCCCCCceeEEEEEccCCCCHHHHHHHHHHHHHHHhhcC--CCCeeeEEE
Confidence            45566678999999999999999999842      2367899998754 223345688899999998 6  999999999


Q ss_pred             ceecCCCcccchhhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhc
Q 039630          100 GCIDGPSRILAPLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEE  169 (174)
Q Consensus       100 ~~~~~~~~~lv~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~  169 (174)
                      .+...+..++++  ++...+.+...+.....................+++..++.++.|++.||+|||++
T Consensus        84 ~~~~~~~~~li~--e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~  151 (293)
T cd05053          84 VCTQEGPLYVVV--EYAAHGNLRDFLRARRPPGEYASPDDPRPPEETLTQKDLVSFAYQVARGMEFLASK  151 (293)
T ss_pred             EEcCCCCeEEEE--EeCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHC
Confidence            999888888888  77777666654433222211111111112334688999999999999999999975

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation,

>KOG0574 consensus STE20-like serine/threonine kinase MST [Signal transduction mechanisms]

Probab=99.58  E-value=7.6e-16  Score=108.88  Aligned_cols=113  Identities=23%  Similarity=0.339  Sum_probs=93.7

Q ss_pred             CeeecceecccCCeeEEEEE-EcCCCEEEEEEeeccCccchhHHHHHHHHHhcccccCCCeeeeecceecCCCcccchhh
Q 039630           35 GFRTSNKIGEGGFGSVYKGR-LEDGTVVAVNVLSVESKQGETEFMSEVASMANINICHENLVKLHGGCIDGPSRILAPLQ  113 (174)
Q Consensus        35 ~~~~~~~lg~G~~g~V~~~~-~~~~~~~avK~~~~~~~~~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~~~~~~~lv~~~  113 (174)
                      -|.++++||+|+||.||++. ...|..+|+|.++..  .+.+++.+|+.+|++++  .+++++++|.+....++++|+  
T Consensus        34 VFDi~~KLGEGSYGSV~KAIH~EsG~v~AIK~VPV~--sDLQEIIKEISIMQQC~--S~yVVKYYGSYFK~sDLWIVM--  107 (502)
T KOG0574|consen   34 VFDIVGKLGEGSYGSVHKAIHRESGHVLAIKKVPVD--TDLQEIIKEISIMQQCK--SKYVVKYYGSYFKHSDLWIVM--  107 (502)
T ss_pred             HHHHHHHhcCCcchHHHHHHHhccCcEEEEEecCcc--chHHHHHHHHHHHHHcC--CchhhhhhhhhccCCceEeeh--
Confidence            46778999999999999988 678999999999755  35668899999999999  999999999999999999998  


Q ss_pred             hhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhh
Q 039630          114 ASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHE  168 (174)
Q Consensus       114 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~  168 (174)
                      +|+..+.+..-.               +.++.++.+..+..+..+.+.||+|||.
T Consensus       108 EYCGAGSiSDI~---------------R~R~K~L~E~EIs~iL~~TLKGL~YLH~  147 (502)
T KOG0574|consen  108 EYCGAGSISDIM---------------RARRKPLSEQEISAVLRDTLKGLQYLHD  147 (502)
T ss_pred             hhcCCCcHHHHH---------------HHhcCCccHHHHHHHHHHHHhHHHHHHH
Confidence            444444443322               2344578999999999999999999986

>cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase

Probab=99.58  E-value=1.6e-14  Score=105.96  Aligned_cols=111  Identities=25%  Similarity=0.270  Sum_probs=89.0

Q ss_pred             ceecccCCeeEEEEEE----cCCCEEEEEEeeccC--ccchhHHHHHHHHHhcccccCCCeeeeecceecCCCcccchhh
Q 039630           40 NKIGEGGFGSVYKGRL----EDGTVVAVNVLSVES--KQGETEFMSEVASMANINICHENLVKLHGGCIDGPSRILAPLQ  113 (174)
Q Consensus        40 ~~lg~G~~g~V~~~~~----~~~~~~avK~~~~~~--~~~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~~~~~~~lv~~~  113 (174)
                      +.||+|+||.||++..    .++..+|+|+++...  ......+..|+.++.+++  |+||+++++.+...+..++++  
T Consensus         2 ~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~--h~niv~~~~~~~~~~~~~lv~--   77 (318)
T cd05582           2 KVLGQGSFGKVFLVRKITGPDAGQLYAMKVLKKATLKVRDRVRTKMERDILAEVN--HPFIVKLHYAFQTEGKLYLIL--   77 (318)
T ss_pred             ceeeeCCCEEEEEEEEeccCCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhCC--CCCcccEEEEEEcCCEEEEEE--
Confidence            6799999999998873    467899999997542  223445778999999999  999999999999998888888  


Q ss_pred             hhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhcc
Q 039630          114 ASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEI  170 (174)
Q Consensus       114 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  170 (174)
                      ++.+++.+...+.                ....+++..+..++.|++.||+|||++.
T Consensus        78 e~~~~~~L~~~l~----------------~~~~l~~~~~~~~~~qi~~~l~~lH~~~  118 (318)
T cd05582          78 DFLRGGDLFTRLS----------------KEVMFTEEDVKFYLAELALALDHLHSLG  118 (318)
T ss_pred             cCCCCCcHHHHHH----------------HcCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            7777776655331                1234788999999999999999999864

Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate

>KOG2052 consensus Activin A type IB receptor, serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.58  E-value=6.3e-15  Score=108.50  Aligned_cols=127  Identities=26%  Similarity=0.327  Sum_probs=99.4

Q ss_pred             ceechhhHHhhcCCeeecceecccCCeeEEEEEEcCCCEEEEEEeeccCccchhHHHHHHHHHhcccccCCCeeeeecce
Q 039630           22 SKISYNELKIATNGFRTSNKIGEGGFGSVYKGRLEDGTVVAVNVLSVESKQGETEFMSEVASMANINICHENLVKLHGGC  101 (174)
Q Consensus        22 ~~~~~~~~~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~avK~~~~~~~~~~~~~~~e~~~l~~l~~~h~~i~~~~~~~  101 (174)
                      +..++-.-+..++.+.+.+.||+|.||.||+|.|+ |..||||++..   .+.+.+.+|.+|.+..=+.|+||+.+++.-
T Consensus       199 SGlplLVQRTiarqI~L~e~IGkGRyGEVwrG~wr-Ge~VAVKiF~s---rdE~SWfrEtEIYqTvmLRHENILgFIaaD  274 (513)
T KOG2052|consen  199 SGLPLLVQRTIARQIVLQEIIGKGRFGEVWRGRWR-GEDVAVKIFSS---RDERSWFRETEIYQTVMLRHENILGFIAAD  274 (513)
T ss_pred             CCchhHhHHhhhheeEEEEEecCccccceeecccc-CCceEEEEecc---cchhhhhhHHHHHHHHHhccchhhhhhhcc
Confidence            44444444566678999999999999999999997 88899999973   345577888888876322399999999876


Q ss_pred             ecCC----CcccchhhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhccC
Q 039630          102 IDGP----SRILAPLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEIK  171 (174)
Q Consensus       102 ~~~~----~~~lv~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~~  171 (174)
                      ..+.    .++||.  +|.+.|+|..++..                 ..++....+.++..+|.||++||-.+-
T Consensus       275 ~~~~gs~TQLwLvT--dYHe~GSL~DyL~r-----------------~tv~~~~ml~LalS~AsGLaHLH~eI~  329 (513)
T KOG2052|consen  275 NKDNGSWTQLWLVT--DYHEHGSLYDYLNR-----------------NTVTTEGMLKLALSIASGLAHLHMEIV  329 (513)
T ss_pred             ccCCCceEEEEEee--ecccCCcHHHHHhh-----------------ccCCHHHHHHHHHHHhhhHHHHHHHHh
Confidence            5543    367777  88888888886632                 357888899999999999999998664

>cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases

Probab=99.58  E-value=3.4e-14  Score=101.24  Aligned_cols=122  Identities=25%  Similarity=0.382  Sum_probs=97.6

Q ss_pred             HhhcCCeeecceecccCCeeEEEEEEcCCCEEEEEEeeccCccchhHHHHHHHHHhcccccCCCeeeeecceecCCCccc
Q 039630           30 KIATNGFRTSNKIGEGGFGSVYKGRLEDGTVVAVNVLSVESKQGETEFMSEVASMANINICHENLVKLHGGCIDGPSRIL  109 (174)
Q Consensus        30 ~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~avK~~~~~~~~~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~~~~~~~l  109 (174)
                      ....++|.+.+.||+|+||.||++...++..+++|.+.... .....+..|+.+++.++  |+|++++++.+......++
T Consensus         2 ~~~~~~~~i~~~ig~g~~~~v~~~~~~~~~~~~vK~~~~~~-~~~~~~~~e~~~l~~l~--h~~i~~~~~~~~~~~~~~~   78 (261)
T cd05034           2 EIPRESLKLERKLGAGQFGEVWMGTWNGTTKVAVKTLKPGT-MSPEAFLQEAQIMKKLR--HDKLVQLYAVCSEEEPIYI   78 (261)
T ss_pred             ccchhheeeeeeeccCcceEEEEEEEcCCceEEEEEecCCc-cCHHHHHHHHHHHhhCC--CCCEeeeeeeeecCCceEE
Confidence            34567899999999999999999997777889999987442 34567899999999999  9999999999988788888


Q ss_pred             chhhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhcc
Q 039630          110 APLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEI  170 (174)
Q Consensus       110 v~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  170 (174)
                      ++  ++.+++.+...+..              .....+++..+..++.|++.|+.|||++.
T Consensus        79 v~--e~~~~~~L~~~i~~--------------~~~~~~~~~~~~~~~~~i~~al~~lh~~~  123 (261)
T cd05034          79 VT--EYMSKGSLLDFLKS--------------GEGKKLRLPQLVDMAAQIAEGMAYLESRN  123 (261)
T ss_pred             EE--eccCCCCHHHHHhc--------------cccCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            87  66666666543311              11124788889999999999999999864

Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t

>cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases

Probab=99.58  E-value=1.5e-14  Score=105.89  Aligned_cols=109  Identities=23%  Similarity=0.251  Sum_probs=88.2

Q ss_pred             ecccCCeeEEEEE-EcCCCEEEEEEeecc---CccchhHHHHHHHHHhcccccCCCeeeeecceecCCCcccchhhhhhh
Q 039630           42 IGEGGFGSVYKGR-LEDGTVVAVNVLSVE---SKQGETEFMSEVASMANINICHENLVKLHGGCIDGPSRILAPLQASIE  117 (174)
Q Consensus        42 lg~G~~g~V~~~~-~~~~~~~avK~~~~~---~~~~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~~~~~~~lv~~~~~~~  117 (174)
                      ||+|+||.||++. ..++..+|+|+++..   .......+..|+.++..++  |+||+++++.+...+..++++  ++.+
T Consensus         1 lg~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~~l~~l~--h~~iv~~~~~~~~~~~~~lv~--e~~~   76 (312)
T cd05585           1 IGKGSFGKVMQVRKRDTQRIYALKTIRKAHIVSRSEVTHTLAERTVLAQVN--CPFIVPLKFSFQSPEKLYLVL--AFIN   76 (312)
T ss_pred             CCcCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCC--CCcEeceeeEEecCCeEEEEE--cCCC
Confidence            6999999999999 456889999999754   2233456788999999999  999999999999888888888  7777


Q ss_pred             hhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhcc
Q 039630          118 ALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEI  170 (174)
Q Consensus       118 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  170 (174)
                      ++.+...+.                ....+++..+..++.|++.||.|||++.
T Consensus        77 ~g~L~~~l~----------------~~~~~~~~~~~~~~~qi~~~l~~lH~~~  113 (312)
T cd05585          77 GGELFHHLQ----------------REGRFDLSRARFYTAELLCALENLHKFN  113 (312)
T ss_pred             CCcHHHHHH----------------hcCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            777665431                1234788888999999999999999854

Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl

>cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N

Probab=99.58  E-value=1.4e-14  Score=106.57  Aligned_cols=114  Identities=21%  Similarity=0.239  Sum_probs=89.1

Q ss_pred             eeecceecccCCeeEEEEE-EcCCCEEEEEEeeccC---ccchhHHHHHHHHH---hcccccCCCeeeeecceecCCCcc
Q 039630           36 FRTSNKIGEGGFGSVYKGR-LEDGTVVAVNVLSVES---KQGETEFMSEVASM---ANINICHENLVKLHGGCIDGPSRI  108 (174)
Q Consensus        36 ~~~~~~lg~G~~g~V~~~~-~~~~~~~avK~~~~~~---~~~~~~~~~e~~~l---~~l~~~h~~i~~~~~~~~~~~~~~  108 (174)
                      |++.+.||+|+||.||++. ..+++.+|+|+++...   ......+..|+.++   ..++  |+||+++++.+...+..+
T Consensus         1 y~i~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~l~~e~~~~~~~~~l~--hp~i~~~~~~~~~~~~~~   78 (324)
T cd05589           1 FRCLAVLGRGHFGKVLLAEYKKTGELYAIKALKKGDIIARDEVESLMCEKRIFETANSER--HPFLVNLFACFQTEDHVC   78 (324)
T ss_pred             CeEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccccC--CCChhceeeEEEcCCEEE
Confidence            5667899999999999998 5578999999997542   23345566676654   4566  999999999999998888


Q ss_pred             cchhhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhcc
Q 039630          109 LAPLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEI  170 (174)
Q Consensus       109 lv~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  170 (174)
                      +++  ++.+++.+....                 ....+++..+..++.|++.||+|||++.
T Consensus        79 lv~--E~~~~~~L~~~~-----------------~~~~l~~~~~~~~~~qi~~al~~lH~~~  121 (324)
T cd05589          79 FVM--EYAAGGDLMMHI-----------------HTDVFSEPRAVFYAACVVLGLQYLHENK  121 (324)
T ss_pred             EEE--cCCCCCcHHHHh-----------------hcCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            888  777766665422                 1124788999999999999999999864

Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved

>cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases

Probab=99.57  E-value=2.1e-14  Score=102.64  Aligned_cols=119  Identities=27%  Similarity=0.387  Sum_probs=93.4

Q ss_pred             cCCeeecceecccCCeeEEEEEEc----CCCEEEEEEeeccC-ccchhHHHHHHHHHhcccccCCCeeeeecceecCCCc
Q 039630           33 TNGFRTSNKIGEGGFGSVYKGRLE----DGTVVAVNVLSVES-KQGETEFMSEVASMANINICHENLVKLHGGCIDGPSR  107 (174)
Q Consensus        33 ~~~~~~~~~lg~G~~g~V~~~~~~----~~~~~avK~~~~~~-~~~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~~~~~~  107 (174)
                      .++|+..+.||+|+||.||+|.+.    +...+++|.++... ......+..|+.++..++  |+|++++.+.+...+..
T Consensus         3 ~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~e~~~l~~l~--h~~i~~~~~~~~~~~~~   80 (266)
T cd05033           3 PSYVTIEKVIGGGEFGEVCRGRLKLPGKKEIDVAIKTLKAGSSDKQRLDFLTEASIMGQFD--HPNIIRLEGVVTKSRPV   80 (266)
T ss_pred             hHHceeeeEecCCccceEEEEEEccCCCCcceEEEEEcCCCCChHHHHHHHHHHHHHHhCC--CCCcceEeEEEecCCce
Confidence            356888899999999999999853    24589999987543 233556888999999999  99999999999888888


Q ss_pred             ccchhhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhcc
Q 039630          108 ILAPLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEI  170 (174)
Q Consensus       108 ~lv~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  170 (174)
                      ++++  ++.+++.+...+.               .....+++..+..++.|++.||.|||++.
T Consensus        81 ~iv~--e~~~~~~L~~~~~---------------~~~~~~~~~~~~~~~~~l~~~l~~Lh~~~  126 (266)
T cd05033          81 MIIT--EYMENGSLDKFLR---------------ENDGKFTVGQLVGMLRGIASGMKYLSEMN  126 (266)
T ss_pred             EEEE--EcCCCCCHHHHHH---------------hccCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            8887  6666666554331               11225788999999999999999999854

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment

>cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk

Probab=99.57  E-value=2.6e-14  Score=101.89  Aligned_cols=121  Identities=24%  Similarity=0.342  Sum_probs=93.7

Q ss_pred             HhhcCCeeecceecccCCeeEEEEEEcCCCEEEEEEeeccCccchhHHHHHHHHHhcccccCCCeeeeecceecCCCccc
Q 039630           30 KIATNGFRTSNKIGEGGFGSVYKGRLEDGTVVAVNVLSVESKQGETEFMSEVASMANINICHENLVKLHGGCIDGPSRIL  109 (174)
Q Consensus        30 ~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~avK~~~~~~~~~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~~~~~~~l  109 (174)
                      .+..++|++.++||+|+||.||++...++..+|+|.+.... .....+.+|+.+++.++  |+|++++++.+. .+..++
T Consensus         2 ~~~~~~~~~~~~ig~G~~g~v~~~~~~~~~~~a~K~~~~~~-~~~~~~~~E~~~l~~l~--h~~i~~~~~~~~-~~~~~~   77 (260)
T cd05067           2 EVPRETLKLVKKLGAGQFGEVWMGYYNGHTKVAIKSLKQGS-MSPEAFLAEANLMKQLQ--HPRLVRLYAVVT-QEPIYI   77 (260)
T ss_pred             ccchHHceeeeeeccCccceEEeeecCCCceEEEEEecCCC-CcHHHHHHHHHHHHhcC--CcCeeeEEEEEc-cCCcEE
Confidence            34567789999999999999999997788899999987442 34567889999999999  999999998764 455666


Q ss_pred             chhhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhcc
Q 039630          110 APLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEI  170 (174)
Q Consensus       110 v~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  170 (174)
                      ++  ++..++.+...+.              ......+++..+..++.|++.||+|||+..
T Consensus        78 v~--e~~~~~~L~~~~~--------------~~~~~~~~~~~~~~i~~~i~~al~~LH~~~  122 (260)
T cd05067          78 IT--EYMENGSLVDFLK--------------TPEGIKLTINKLIDMAAQIAEGMAFIERKN  122 (260)
T ss_pred             EE--EcCCCCCHHHHHH--------------hcCCCCCCHHHHHHHHHHHHHHHHHHhcCC
Confidence            66  6666565554321              112235788888999999999999999754

Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr

>cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha

Probab=99.57  E-value=9.1e-15  Score=110.45  Aligned_cols=95  Identities=24%  Similarity=0.328  Sum_probs=75.5

Q ss_pred             hHHhhcCCeeecceecccCCeeEEEEEEc------CCCEEEEEEeeccC-ccchhHHHHHHHHHhcccccCCCeeeeecc
Q 039630           28 ELKIATNGFRTSNKIGEGGFGSVYKGRLE------DGTVVAVNVLSVES-KQGETEFMSEVASMANINICHENLVKLHGG  100 (174)
Q Consensus        28 ~~~~~~~~~~~~~~lg~G~~g~V~~~~~~------~~~~~avK~~~~~~-~~~~~~~~~e~~~l~~l~~~h~~i~~~~~~  100 (174)
                      .|....+.|.+++.||+|+||.||+|...      .+..||+|.++... ....+.+.+|+.++..+. .||||++++++
T Consensus        31 ~~~~~~~~~~~~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~Ei~~l~~l~-~HpnIv~l~~~  109 (400)
T cd05105          31 RWEFPRDGLVLGRILGSGAFGKVVEGTAYGLSRSQPVMKVAVKMLKPTARSSEKQALMSELKIMTHLG-PHLNIVNLLGA  109 (400)
T ss_pred             ceeccccceehhheecCCCCceEEEEEEcccCCCCCceEEEEEecCCCCChHHHHHHHHHHHHHHhcC-CCCCeeeEEEE
Confidence            55666788999999999999999999831      23479999997542 233567899999999984 49999999999


Q ss_pred             eecCCCcccchhhhhhhhhhhhhhh
Q 039630          101 CIDGPSRILAPLQASIEALFLFTKL  125 (174)
Q Consensus       101 ~~~~~~~~lv~~~~~~~~~~l~~~~  125 (174)
                      +...+..++++  ++..++.|...+
T Consensus       110 ~~~~~~~~lv~--Ey~~~g~L~~~l  132 (400)
T cd05105         110 CTKSGPIYIIT--EYCFYGDLVNYL  132 (400)
T ss_pred             EccCCceEEEE--EecCCCcHHHHH
Confidence            99999999998  777777665544

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-

>cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants

Probab=99.57  E-value=2.8e-14  Score=105.32  Aligned_cols=115  Identities=17%  Similarity=0.260  Sum_probs=86.4

Q ss_pred             CeeecceecccCCeeEEEEE-EcCCCEEEEEEeecc--CccchhHHHHHHHHHhcccccCCCeeeeecceecCC-----C
Q 039630           35 GFRTSNKIGEGGFGSVYKGR-LEDGTVVAVNVLSVE--SKQGETEFMSEVASMANINICHENLVKLHGGCIDGP-----S  106 (174)
Q Consensus        35 ~~~~~~~lg~G~~g~V~~~~-~~~~~~~avK~~~~~--~~~~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~~~~-----~  106 (174)
                      .|++.+.||+|+||.||++. ..++..||+|.++..  .......+.+|+.+++.++  |+||+++++.+...+     .
T Consensus         1 ry~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~--hpniv~~~~~~~~~~~~~~~~   78 (338)
T cd07859           1 RYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKINDVFEHVSDATRILREIKLLRLLR--HPDIVEIKHIMLPPSRREFKD   78 (338)
T ss_pred             CeEEEEEEeecCCeEEEEEEECCCCCEEEEEEechhhccchhHHHHHHHHHHHHhCC--CCCEeeecceEeccCCCCCce
Confidence            37888999999999999998 557899999998743  2233456889999999999  999999999886543     2


Q ss_pred             cccchhhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhcc
Q 039630          107 RILAPLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEI  170 (174)
Q Consensus       107 ~~lv~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  170 (174)
                      .++++  ++.+. .+...+                .....+++..+..++.|++.||+|||++.
T Consensus        79 ~~lv~--e~~~~-~L~~~l----------------~~~~~~~~~~~~~i~~qi~~aL~~LH~~~  123 (338)
T cd07859          79 IYVVF--ELMES-DLHQVI----------------KANDDLTPEHHQFFLYQLLRALKYIHTAN  123 (338)
T ss_pred             EEEEE--ecCCC-CHHHHH----------------HhcccCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            45666  44432 222211                11234788999999999999999999864

Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos

>cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C

Probab=99.57  E-value=1.8e-14  Score=106.26  Aligned_cols=112  Identities=18%  Similarity=0.156  Sum_probs=88.8

Q ss_pred             ceecccCCeeEEEEE-EcCCCEEEEEEeeccC---ccchhHHHHHHHHHhcccccCCCeeeeecceecCCCcccchhhhh
Q 039630           40 NKIGEGGFGSVYKGR-LEDGTVVAVNVLSVES---KQGETEFMSEVASMANINICHENLVKLHGGCIDGPSRILAPLQAS  115 (174)
Q Consensus        40 ~~lg~G~~g~V~~~~-~~~~~~~avK~~~~~~---~~~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~~~~~~~lv~~~~~  115 (174)
                      +.||+|+||.||++. ..++..+|+|+++...   ......+..|..++..+. .||||+++++.+...+..++++  ++
T Consensus         1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~il~~~~-~hp~Iv~~~~~~~~~~~~~lv~--e~   77 (329)
T cd05588           1 RVIGRGSYAKVLLVELKKTRRIYAMKVIKKELVNDDEDIDWVQTEKHVFETAS-NHPFLVGLHSCFQTESRLFFVI--EF   77 (329)
T ss_pred             CeEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhcc-CCCCCCceEEEEEcCCEEEEEE--eC
Confidence            468999999999998 5578899999998542   233455788999988873 3999999999999988888888  77


Q ss_pred             hhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhcc
Q 039630          116 IEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEI  170 (174)
Q Consensus       116 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  170 (174)
                      .+++.+...+.                ....+++..+..++.|++.||.|||++.
T Consensus        78 ~~~g~L~~~~~----------------~~~~l~~~~~~~~~~qi~~~l~~lH~~~  116 (329)
T cd05588          78 VSGGDLMFHMQ----------------RQRKLPEEHARFYSAEISLALNFLHERG  116 (329)
T ss_pred             CCCCCHHHHHH----------------HcCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            77666654321                1235789999999999999999999864

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl

>cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3

Probab=99.57  E-value=1.3e-14  Score=103.74  Aligned_cols=117  Identities=21%  Similarity=0.303  Sum_probs=95.3

Q ss_pred             CCeeecceecccCCeeEEEEE-EcCCCEEEEEEeeccCccchhHHHHHHHHHhcccccCCCeeeeecceecCCCcccchh
Q 039630           34 NGFRTSNKIGEGGFGSVYKGR-LEDGTVVAVNVLSVESKQGETEFMSEVASMANINICHENLVKLHGGCIDGPSRILAPL  112 (174)
Q Consensus        34 ~~~~~~~~lg~G~~g~V~~~~-~~~~~~~avK~~~~~~~~~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~~~~~~~lv~~  112 (174)
                      ++|...+.||+|+||.||.+. ..++..+++|.++.........+.+|+.+++.++  |+|++++++.+...+..++++ 
T Consensus         9 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~~~~l~--h~~ii~~~~~~~~~~~~~lv~-   85 (267)
T cd06645           9 EDFELIQRIGSGTYGDVYKARNVNTGELAAIKVIKLEPGEDFAVVQQEIIMMKDCK--HSNIVAYFGSYLRRDKLWICM-   85 (267)
T ss_pred             HHHHHHHHhCCCCCeEEEEEEEcCCCcEEEEEEEecCchhHHHHHHHHHHHHHhCC--CCCeeeEEEEEEeCCEEEEEE-
Confidence            467778999999999999998 5568899999998665455566788999999999  999999999999888888888 


Q ss_pred             hhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhcc
Q 039630          113 QASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEI  170 (174)
Q Consensus       113 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  170 (174)
                       ++.+++.+...+.                ....+++.....++.|++.||.|||++.
T Consensus        86 -e~~~~~~L~~~~~----------------~~~~~~~~~~~~~~~~i~~~l~~lH~~~  126 (267)
T cd06645          86 -EFCGGGSLQDIYH----------------VTGPLSESQIAYVSRETLQGLYYLHSKG  126 (267)
T ss_pred             -eccCCCcHHHHHH----------------hcCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence             6666666654321                1234788999999999999999999864

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated

>cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor

Probab=99.57  E-value=2.1e-14  Score=105.27  Aligned_cols=117  Identities=23%  Similarity=0.414  Sum_probs=88.5

Q ss_pred             CCeeecceecccCCeeEEEEEE-cCCC----EEEEEEeeccC-ccchhHHHHHHHHHhcccccCCCeeeeecceecCCCc
Q 039630           34 NGFRTSNKIGEGGFGSVYKGRL-EDGT----VVAVNVLSVES-KQGETEFMSEVASMANINICHENLVKLHGGCIDGPSR  107 (174)
Q Consensus        34 ~~~~~~~~lg~G~~g~V~~~~~-~~~~----~~avK~~~~~~-~~~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~~~~~~  107 (174)
                      .+|+..+.||+|+||.||+|.+ .++.    .+|+|.++... ......+..|+.+++.++  |+||+++++.+... ..
T Consensus         7 ~~f~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~--h~niv~~~g~~~~~-~~   83 (316)
T cd05108           7 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD--NPHVCRLLGICLTS-TV   83 (316)
T ss_pred             hhceeeeeeecCCCceEEEEEEecCCCccceeEEEEeccccCCHHHHHHHHHHHHHHHhCC--CCCCCeEEEEEcCC-Cc
Confidence            5688899999999999999984 3333    48999987542 334567889999999999  99999999998765 34


Q ss_pred             ccchhhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhcc
Q 039630          108 ILAPLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEI  170 (174)
Q Consensus       108 ~lv~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  170 (174)
                      ++++  ++...+.+...+.               .....+++..+..++.|++.||+|||++.
T Consensus        84 ~~v~--e~~~~g~l~~~l~---------------~~~~~~~~~~~~~~~~qi~~~L~~LH~~~  129 (316)
T cd05108          84 QLIT--QLMPFGCLLDYVR---------------EHKDNIGSQYLLNWCVQIAKGMNYLEERR  129 (316)
T ss_pred             eeee--ecCCCCCHHHHHH---------------hccccCCHHHHHHHHHHHHHHHHHHHhcC
Confidence            4555  5556666554331               11224678888899999999999999854

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor

>cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3

Probab=99.57  E-value=3e-14  Score=102.81  Aligned_cols=118  Identities=25%  Similarity=0.361  Sum_probs=91.3

Q ss_pred             CCeeecceecccCCeeEEEEEE-----cCCCEEEEEEeeccCccchhHHHHHHHHHhcccccCCCeeeeecceecCC--C
Q 039630           34 NGFRTSNKIGEGGFGSVYKGRL-----EDGTVVAVNVLSVESKQGETEFMSEVASMANINICHENLVKLHGGCIDGP--S  106 (174)
Q Consensus        34 ~~~~~~~~lg~G~~g~V~~~~~-----~~~~~~avK~~~~~~~~~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~~~~--~  106 (174)
                      .+|++.+.||+|+||.||.+..     .++..+++|.++.........+.+|+.++..++  |+|++++.+.+...+  .
T Consensus         4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~--h~~iv~~~~~~~~~~~~~   81 (284)
T cd05081           4 RHLKFIQQLGKGNFGSVELCRYDPLQDNTGEVVAVKKLQHSTAEHLRDFEREIEILKSLQ--HDNIVKYKGVCYSAGRRN   81 (284)
T ss_pred             ccceeeeeccCCCCceEEEEEecCCcCCCCcEEEEEEeccCCHHHHHHHHHHHHHHHhCC--CCCeeEEEEEEccCCCCc
Confidence            4688889999999999999874     357799999987665555667899999999999  999999999875443  4


Q ss_pred             cccchhhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhcc
Q 039630          107 RILAPLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEI  170 (174)
Q Consensus       107 ~~lv~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  170 (174)
                      .++++  ++.+++.+...+.               .....+++..+..++.|++.||+|||++.
T Consensus        82 ~~lv~--e~~~~~~L~~~l~---------------~~~~~l~~~~~~~~~~~l~~aL~~LH~~~  128 (284)
T cd05081          82 LRLVM--EYLPYGSLRDYLQ---------------KHRERLDHRKLLLYASQICKGMEYLGSKR  128 (284)
T ss_pred             eEEEE--EecCCCCHHHHHH---------------hcCcCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            45666  6666666654331               11224788889999999999999999864

Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th

>KOG1989 consensus ARK protein kinase family [Signal transduction mechanisms]

Probab=99.56  E-value=1.2e-14  Score=114.20  Aligned_cols=135  Identities=15%  Similarity=0.194  Sum_probs=95.0

Q ss_pred             hHHhhcCCeeecceecccCCeeEEEEEEc-CCCEEEEEEeeccCccchhHHHHHHHHHhcccccCCCeeeeecceecCC-
Q 039630           28 ELKIATNGFRTSNKIGEGGFGSVYKGRLE-DGTVVAVNVLSVESKQGETEFMSEVASMANINICHENLVKLHGGCIDGP-  105 (174)
Q Consensus        28 ~~~~~~~~~~~~~~lg~G~~g~V~~~~~~-~~~~~avK~~~~~~~~~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~~~~-  105 (174)
                      .+.+....+++.+.|.+|+|+.||.+... .|..+|+|.+-..+......+.+|+++|+.|+ .|+|||.+++...... 
T Consensus        31 ~~~Vg~~~v~V~~vLAEGGFa~VYla~~~~~~~~~AlKrm~~~de~~L~~v~~EI~~MK~L~-gh~nIV~yidss~~~~~  109 (738)
T KOG1989|consen   31 TFTVGSHRVTVEKVLAEGGFAQVYLAQDVKGGKKYALKRMYVNDEEALNAVKREIDIMKLLS-GHKNIVSYIDSSAINRS  109 (738)
T ss_pred             EEEECCEEEEEEEEEccCCcEEEEEEEecCCCceeeeeeeecCCHHHHHHHHHHHHHHHHhc-CCCceeeEecccccccc
Confidence            34445557899999999999999999944 44899999997776667778999999999998 8999999999432211 


Q ss_pred             CcccchhhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhccCCC
Q 039630          106 SRILAPLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEIKTT  173 (174)
Q Consensus       106 ~~~lv~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~~~~  173 (174)
                      ...-+      .-..|.++||.++.+..++..    .....|.+..+++|++|+|+|+++||..-+|.
T Consensus       110 ~~~~~------~EvllLmEyC~gg~Lvd~mn~----Rlq~~lte~eVLkIf~dv~~AVa~mH~~~pPi  167 (738)
T KOG1989|consen  110 SNNGV------WEVLLLMEYCKGGSLVDFMNT----RLQTRLTEDEVLKIFYDVCEAVAAMHYLKPPI  167 (738)
T ss_pred             CCCce------eEEEeehhhccCCcHHHHHHH----HHhccCChHHHHHHHHHHHHHHHHHhcCCCcc
Confidence            00000      012234445543322222111    11224899999999999999999999988763

>cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase

Probab=99.56  E-value=4.9e-14  Score=102.58  Aligned_cols=117  Identities=25%  Similarity=0.341  Sum_probs=91.4

Q ss_pred             CCeeecceecccCCeeEEEEE-EcCCCEEEEEEeeccC-ccchhHHHHHHHHHhcccccCCCeeeeecceecCCCcccch
Q 039630           34 NGFRTSNKIGEGGFGSVYKGR-LEDGTVVAVNVLSVES-KQGETEFMSEVASMANINICHENLVKLHGGCIDGPSRILAP  111 (174)
Q Consensus        34 ~~~~~~~~lg~G~~g~V~~~~-~~~~~~~avK~~~~~~-~~~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~~~~~~~lv~  111 (174)
                      ++|...+.||+|+||.||++. ..++..||+|.++... ......+.+|+.+++.++  |+||+++++.+...+..++++
T Consensus         6 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~--h~nI~~~~~~~~~~~~~~lv~   83 (301)
T cd07873           6 ETYIKLDKLGEGTYATVYKGRSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLK--HANIVTLHDIIHTEKSLTLVF   83 (301)
T ss_pred             cceEEeeEeccCcCEEEEEEEEcCCCcEEEEEEEecccccCchhHHHHHHHHHHhcC--CCCcceEEEEEecCCeEEEEE
Confidence            468889999999999999998 4568899999997553 233456778999999999  999999999999888888888


Q ss_pred             hhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhcc
Q 039630          112 LQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEI  170 (174)
Q Consensus       112 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  170 (174)
                        ++... .+...+.               .....+++..+..++.|++.||+|||++.
T Consensus        84 --e~~~~-~l~~~l~---------------~~~~~~~~~~~~~~~~qi~~aL~~lH~~~  124 (301)
T cd07873          84 --EYLDK-DLKQYLD---------------DCGNSINMHNVKLFLFQLLRGLNYCHRRK  124 (301)
T ss_pred             --ecccc-CHHHHHH---------------hcCCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence              55442 3332221               11224678888999999999999999864

Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl

>cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1

Probab=99.56  E-value=2.9e-14  Score=101.93  Aligned_cols=112  Identities=20%  Similarity=0.292  Sum_probs=85.4

Q ss_pred             ceecccCCeeEEEEEEcC-------------CCEEEEEEeeccCccchhHHHHHHHHHhcccccCCCeeeeecceecCCC
Q 039630           40 NKIGEGGFGSVYKGRLED-------------GTVVAVNVLSVESKQGETEFMSEVASMANINICHENLVKLHGGCIDGPS  106 (174)
Q Consensus        40 ~~lg~G~~g~V~~~~~~~-------------~~~~avK~~~~~~~~~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~~~~~  106 (174)
                      +.||+|+||.||+|.+..             ...+++|.+..........+..|+.++..++  ||||+++++.+.....
T Consensus         1 ~~lg~G~~~~vy~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~~~~l~~l~--hp~iv~~~~~~~~~~~   78 (262)
T cd05077           1 EHLGRGTRTQIYAGILNYKDDDEDDGYSYEKEIKVILKVLDPSHRDISLAFFETASMMRQVS--HKHIVLLYGVCVRDVE   78 (262)
T ss_pred             CccccCCcceEeeeecccCCCccccccchhhceeEEEeecChhhhhHHHHHHHHHHHHHhCC--CCCEeeEEEEEecCCC
Confidence            368999999999998432             2368888876554445567888899999999  9999999999988888


Q ss_pred             cccchhhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhcc
Q 039630          107 RILAPLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEI  170 (174)
Q Consensus       107 ~~lv~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  170 (174)
                      .++++  ++.+.+.+...+               ......+++..+..++.||+.||+|||++.
T Consensus        79 ~~lv~--e~~~~~~l~~~~---------------~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~  125 (262)
T cd05077          79 NIMVE--EFVEFGPLDLFM---------------HRKSDVLTTPWKFKVAKQLASALSYLEDKD  125 (262)
T ss_pred             CEEEE--ecccCCCHHHHH---------------HhcCCCCCHHHHHHHHHHHHHHHHHhhhCC
Confidence            88877  666655543322               111234788888999999999999999754

Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom

>cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases

Probab=99.56  E-value=3.1e-14  Score=101.28  Aligned_cols=117  Identities=20%  Similarity=0.330  Sum_probs=93.0

Q ss_pred             CCeeecceecccCCeeEEEEEEcCCCEEEEEEeeccCccchhHHHHHHHHHhcccccCCCeeeeecceecCCCcccchhh
Q 039630           34 NGFRTSNKIGEGGFGSVYKGRLEDGTVVAVNVLSVESKQGETEFMSEVASMANINICHENLVKLHGGCIDGPSRILAPLQ  113 (174)
Q Consensus        34 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~avK~~~~~~~~~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~~~~~~~lv~~~  113 (174)
                      .+|+..+.||+|+||.||++...++..+++|.+... ......+..|+.+++.++  |+|++++++.+...+..++++  
T Consensus         4 ~~~~~~~~lg~G~~~~v~~~~~~~~~~~~iK~~~~~-~~~~~~~~~e~~~l~~l~--~~~i~~~~~~~~~~~~~~lv~--   78 (256)
T cd05059           4 SELTFLKELGSGQFGVVHLGKWRGKIDVAIKMIREG-AMSEDDFIEEAKVMMKLS--HPNLVQLYGVCTKQRPIFIVT--   78 (256)
T ss_pred             HHcchhhhhccCCCceEEEeEecCCccEEEEEeccC-CCCHHHHHHHHHHHHhCC--CCCEEEEEEEEcCCCceEEEE--
Confidence            357778999999999999998766778999998643 233456888999999999  999999999998888888887  


Q ss_pred             hhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhcc
Q 039630          114 ASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEI  170 (174)
Q Consensus       114 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  170 (174)
                      ++.+++.+...+..               ....+++.....++.|++.||+|||++.
T Consensus        79 e~~~~~~L~~~l~~---------------~~~~~~~~~~~~i~~qi~~~l~~lH~~~  120 (256)
T cd05059          79 EYMANGCLLNYLRE---------------RKGKLGTEWLLDMCSDVCEAMEYLESNG  120 (256)
T ss_pred             ecCCCCCHHHHHHh---------------cccCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            66666666553311               1124788899999999999999999864

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows

>cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase

Probab=99.56  E-value=2.3e-14  Score=102.34  Aligned_cols=121  Identities=27%  Similarity=0.403  Sum_probs=95.6

Q ss_pred             hhcCCeeecceecccCCeeEEEEE-EcCCCEEEEEEeeccCccchhHHHHHHHHHhcccccCCCeeeeecceecCCCccc
Q 039630           31 IATNGFRTSNKIGEGGFGSVYKGR-LEDGTVVAVNVLSVESKQGETEFMSEVASMANINICHENLVKLHGGCIDGPSRIL  109 (174)
Q Consensus        31 ~~~~~~~~~~~lg~G~~g~V~~~~-~~~~~~~avK~~~~~~~~~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~~~~~~~l  109 (174)
                      ....+|...+.||+|+||.||++. ...+..+++|.++.. ......+.+|+.+++.++  |+|++++++.+...+..++
T Consensus         3 ~~~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~K~~~~~-~~~~~~~~~e~~~l~~l~--h~~i~~~~~~~~~~~~~~l   79 (263)
T cd05052           3 MERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKED-TMEVEEFLKEAAVMKEIK--HPNLVQLLGVCTREPPFYI   79 (263)
T ss_pred             CchHHeEEeeecCCcccceEEEEEEecCCceEEEEEecCC-chHHHHHHHHHHHHHhCC--CCChhheEEEEcCCCCcEE
Confidence            344568888999999999999999 456889999998743 334567889999999998  9999999999988888888


Q ss_pred             chhhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhcc
Q 039630          110 APLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEI  170 (174)
Q Consensus       110 v~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  170 (174)
                      ++  ++.+++.+...+..              .....+++..++.++.|++.||+|||++.
T Consensus        80 v~--e~~~~~~L~~~~~~--------------~~~~~l~~~~~~~~~~ql~~~l~~lH~~~  124 (263)
T cd05052          80 IT--EFMTYGNLLDYLRE--------------CNRQEVNAVVLLYMATQISSAMEYLEKKN  124 (263)
T ss_pred             EE--EeCCCCcHHHHHHh--------------CCCCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            87  66666666543311              11234788888999999999999999864

Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays

>cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase

Probab=99.56  E-value=2.5e-14  Score=102.40  Aligned_cols=120  Identities=18%  Similarity=0.203  Sum_probs=93.1

Q ss_pred             hcCCeeecceecccCCeeEEEEE-EcCCCEEEEEEeeccCccchhHHHHHHHHHhcccccCCCeeeeecceecCCCcccc
Q 039630           32 ATNGFRTSNKIGEGGFGSVYKGR-LEDGTVVAVNVLSVESKQGETEFMSEVASMANINICHENLVKLHGGCIDGPSRILA  110 (174)
Q Consensus        32 ~~~~~~~~~~lg~G~~g~V~~~~-~~~~~~~avK~~~~~~~~~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~~~~~~~lv  110 (174)
                      +.++......||+|+||.||++. ..++..+++|.+..........+.+|+.+++.++  |+||+++++.+...+..+++
T Consensus         6 ~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~e~~~l~~l~--h~~iv~~~~~~~~~~~~~lv   83 (268)
T cd06624           6 EYDENGERVVLGKGTYGIVYAARDLSTQVRIAIKEIPERDSRYVQPLHEEIALHSYLK--HRNIVQYLGSDSENGFFKIF   83 (268)
T ss_pred             ccccCCceEEEecCCceEEEEeEecCCCcEEEEEEecCCCHHHHHHHHHHHHHHHhcC--CCCeeeeeeeeccCCEEEEE
Confidence            33444445689999999999998 5567889999987665555667899999999999  99999999999998888888


Q ss_pred             hhhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccC--CHHHHHHHHHHHHHHHHHhhhcc
Q 039630          111 PLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKF--NWIARREIALGIARGLAYIHEEI  170 (174)
Q Consensus       111 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~qi~~gl~yLH~~~  170 (174)
                      +  ++..++.+...+..               ....+  ++..+..++.|++.||+|||++.
T Consensus        84 ~--e~~~~~~L~~~l~~---------------~~~~~~~~~~~~~~~~~qi~~al~~lH~~~  128 (268)
T cd06624          84 M--EQVPGGSLSALLRS---------------KWGPLKDNEQTIIFYTKQILEGLKYLHDNQ  128 (268)
T ss_pred             E--ecCCCCCHHHHHHH---------------hcccCCCcHHHHHHHHHHHHHHHHHHHHCC
Confidence            8  66666666553321               11123  67778889999999999999853

Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina

>cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5

Probab=99.56  E-value=3.9e-14  Score=102.04  Aligned_cols=112  Identities=19%  Similarity=0.268  Sum_probs=89.9

Q ss_pred             CeeecceecccCCeeEEEEE-EcCCCEEEEEEeecc-CccchhHHHHHHHHHhcccccCCCeeeeecceecCCCcccchh
Q 039630           35 GFRTSNKIGEGGFGSVYKGR-LEDGTVVAVNVLSVE-SKQGETEFMSEVASMANINICHENLVKLHGGCIDGPSRILAPL  112 (174)
Q Consensus        35 ~~~~~~~lg~G~~g~V~~~~-~~~~~~~avK~~~~~-~~~~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~~~~~~~lv~~  112 (174)
                      +|+..+.||+|+||.||++. ..++..+|+|.+... .......+.+|+.++..++  |+|++++++.+...+..++++ 
T Consensus         2 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~--h~~iv~~~~~~~~~~~~~lv~-   78 (279)
T cd06619           2 DIQYQEILGHGNGGTVYKAYHLLTRRILAVKVIPLDITVELQKQIMSELEILYKCD--SPYIIGFYGAFFVENRISICT-   78 (279)
T ss_pred             cchheeeeccCCCeEEEEEEEcCCCcEEEEEEEecCCChHHHHHHHHHHHHHHhCC--CCCeeeEEEEEEECCEEEEEE-
Confidence            56778999999999999998 567889999998754 2334456889999999999  999999999999888877777 


Q ss_pred             hhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhcc
Q 039630          113 QASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEI  170 (174)
Q Consensus       113 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  170 (174)
                       ++.+++.+...                    ..+++..+..++.|++.||+|||+..
T Consensus        79 -e~~~~~~l~~~--------------------~~~~~~~~~~~~~qi~~~l~~lH~~~  115 (279)
T cd06619          79 -EFMDGGSLDVY--------------------RKIPEHVLGRIAVAVVKGLTYLWSLK  115 (279)
T ss_pred             -ecCCCCChHHh--------------------hcCCHHHHHHHHHHHHHHHHHHHHCC
Confidence             55555544221                    13577888899999999999999864

Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p

>cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7

Probab=99.56  E-value=4.3e-14  Score=100.90  Aligned_cols=121  Identities=21%  Similarity=0.299  Sum_probs=95.8

Q ss_pred             CCeeecceecccCCeeEEEEEE-cCCCEEEEEEeecc---CccchhHHHHHHHHHhcccccCCCeeeeecceecCCCccc
Q 039630           34 NGFRTSNKIGEGGFGSVYKGRL-EDGTVVAVNVLSVE---SKQGETEFMSEVASMANINICHENLVKLHGGCIDGPSRIL  109 (174)
Q Consensus        34 ~~~~~~~~lg~G~~g~V~~~~~-~~~~~~avK~~~~~---~~~~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~~~~~~~l  109 (174)
                      ++|...+.||+|+||.||++.. .+++.+++|.++..   .......+.+|+.++++++  |++++++++.+...+..++
T Consensus         2 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~ei~~l~~~~--~~~i~~~~~~~~~~~~~~l   79 (267)
T cd08224           2 GNFKIEKKIGKGQFSVVYKAICLLDGRVVALKKVQIFEMMDAKARQDCLKEIDLLKQLD--HPNVIKYLASFIENNELNI   79 (267)
T ss_pred             CceeeeeeeccCCceEEEEEEEcCCCCEEEEEEeecccccchhhHHHHHHHHHHHHhCC--CCCeeeeeeeeecCCeEEE
Confidence            4688899999999999999994 47899999998643   2333567889999999999  9999999999999888888


Q ss_pred             chhhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhcc
Q 039630          110 APLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEI  170 (174)
Q Consensus       110 v~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  170 (174)
                      ++  ++.+++.+...+...            ......+++..+..++.|++.||.|||+..
T Consensus        80 v~--e~~~~~~L~~~l~~~------------~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~  126 (267)
T cd08224          80 VL--ELADAGDLSRMIKHF------------KKQKRLIPERTIWKYFVQLCSALEHMHSKR  126 (267)
T ss_pred             EE--ecCCCCCHHHHHHHh------------cccCCCcCHHHHHHHHHHHHHHHHHHHhCC
Confidence            88  666666665433110            112334788899999999999999999853

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a

>cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases

Probab=99.56  E-value=4.4e-14  Score=100.57  Aligned_cols=119  Identities=22%  Similarity=0.338  Sum_probs=96.6

Q ss_pred             cCCeeecceecccCCeeEEEEE-EcCCCEEEEEEeeccCccchhHHHHHHHHHhcccccCCCeeeeecceecCCCcccch
Q 039630           33 TNGFRTSNKIGEGGFGSVYKGR-LEDGTVVAVNVLSVESKQGETEFMSEVASMANINICHENLVKLHGGCIDGPSRILAP  111 (174)
Q Consensus        33 ~~~~~~~~~lg~G~~g~V~~~~-~~~~~~~avK~~~~~~~~~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~~~~~~~lv~  111 (174)
                      .++|...+.||+|+||.||++. ..++..+++|.+..........+.+|+.+++.++  |+|++++++.+...+..++++
T Consensus         2 ~~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~~~--h~~i~~~~~~~~~~~~~~l~~   79 (262)
T cd06613           2 QEDYELIQRIGSGTYGDVYKARDIATGELVAIKVIKLEPGDDFEIIQQEISMLKECR--HPNIVAYFGSYLRRDKLWIVM   79 (262)
T ss_pred             ccceEEEEEecCCCceEEEEeEecCCCCEEEEEEEEcCchhhHHHHHHHHHHHHhCC--CCChhceEEEEEeCCEEEEEE
Confidence            4578889999999999999998 4567899999998765556778899999999999  999999999998888888887


Q ss_pred             hhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhcc
Q 039630          112 LQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEI  170 (174)
Q Consensus       112 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  170 (174)
                        ++.++..+...+.               .....+++..+..++.|++.||+|||++.
T Consensus        80 --e~~~~~~l~~~~~---------------~~~~~l~~~~~~~~~~ql~~~l~~lh~~~  121 (262)
T cd06613          80 --EYCGGGSLQDIYQ---------------VTRGPLSELQIAYVCRETLKGLAYLHETG  121 (262)
T ss_pred             --eCCCCCcHHHHHH---------------hhccCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence              6665555544221               11134788889999999999999999854

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ

>cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase

Probab=99.56  E-value=2.5e-14  Score=107.15  Aligned_cols=115  Identities=17%  Similarity=0.209  Sum_probs=87.3

Q ss_pred             CeeecceecccCCeeEEEEE-EcCCCEEEEEEeecc--CccchhHHHHHHHHHhcccccCCCeeeeecceecCC-----C
Q 039630           35 GFRTSNKIGEGGFGSVYKGR-LEDGTVVAVNVLSVE--SKQGETEFMSEVASMANINICHENLVKLHGGCIDGP-----S  106 (174)
Q Consensus        35 ~~~~~~~lg~G~~g~V~~~~-~~~~~~~avK~~~~~--~~~~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~~~~-----~  106 (174)
                      +|++.+.||+|+||.||++. ..++..+|+|.+...  .......+.+|+.+++.++  |+||+++++.+...+     .
T Consensus         1 ~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~--h~niv~~~~~~~~~~~~~~~~   78 (372)
T cd07853           1 DVEPDRPIGYGAFGVVWSVTDPRDGKRVALKKMPNVFQNLVSCKRVFRELKMLCFFK--HDNVLSALDILQPPHIDPFEE   78 (372)
T ss_pred             CCcccceeeeCCCEEEEEEEECCCCCEEEEEeccccccchHHHHHHHHHHHHHHhCC--CCCcCCHhheecCCCccccce
Confidence            36778999999999999998 467899999998643  2233456889999999999  999999999998765     4


Q ss_pred             cccchhhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhcc
Q 039630          107 RILAPLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEI  170 (174)
Q Consensus       107 ~~lv~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  170 (174)
                      .++++  ++... .+...+                .....+++..+..++.|++.||.|||++.
T Consensus        79 ~~lv~--e~~~~-~l~~~~----------------~~~~~l~~~~~~~~~~qi~~aL~~LH~~~  123 (372)
T cd07853          79 IYVVT--ELMQS-DLHKII----------------VSPQPLSSDHVKVFLYQILRGLKYLHSAG  123 (372)
T ss_pred             EEEEe--ecccc-CHHHHH----------------hcCCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            56666  43332 222211                12235788899999999999999999864

Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription

>cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha

Probab=99.56  E-value=2.7e-14  Score=105.12  Aligned_cols=109  Identities=22%  Similarity=0.218  Sum_probs=88.3

Q ss_pred             ceecccCCeeEEEEE-EcCCCEEEEEEeeccC---ccchhHHHHHHHHHhcccccCCCeeeeecceecCCCcccchhhhh
Q 039630           40 NKIGEGGFGSVYKGR-LEDGTVVAVNVLSVES---KQGETEFMSEVASMANINICHENLVKLHGGCIDGPSRILAPLQAS  115 (174)
Q Consensus        40 ~~lg~G~~g~V~~~~-~~~~~~~avK~~~~~~---~~~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~~~~~~~lv~~~~~  115 (174)
                      +.||+|+||.||.+. ..++..+|+|+++...   ......+..|+.++..+.  |+||+++.+.+...+..++|+  ++
T Consensus         1 ~~lG~G~~g~V~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~~~--hp~i~~~~~~~~~~~~~~lv~--E~   76 (325)
T cd05594           1 KLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSR--HPFLTALKYSFQTHDRLCFVM--EY   76 (325)
T ss_pred             CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCC--CCCCCceEEEEEcCCEEEEEE--eC
Confidence            468999999999998 5678999999997542   233456778999999998  999999999999988888888  77


Q ss_pred             hhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhh
Q 039630          116 IEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHE  168 (174)
Q Consensus       116 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~  168 (174)
                      .+++.+...+.                ....+++..+..++.|++.||.|||+
T Consensus        77 ~~~~~L~~~l~----------------~~~~l~~~~~~~~~~qi~~aL~~lH~  113 (325)
T cd05594          77 ANGGELFFHLS----------------RERVFSEDRARFYGAEIVSALDYLHS  113 (325)
T ss_pred             CCCCcHHHHHH----------------hcCCCCHHHHHHHHHHHHHHHHHHHh
Confidence            77776654331                12347888999999999999999997

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien

>KOG0658 consensus Glycogen synthase kinase-3 [Carbohydrate transport and metabolism]

Probab=99.56  E-value=6.8e-15  Score=105.79  Aligned_cols=118  Identities=21%  Similarity=0.289  Sum_probs=84.4

Q ss_pred             CeeecceecccCCeeEEEEE-EcCCCEEEEEEeeccCccchhHHHHHHHHHhcccccCCCeeeeecceecCCCcccchhh
Q 039630           35 GFRTSNKIGEGGFGSVYKGR-LEDGTVVAVNVLSVESKQGETEFMSEVASMANINICHENLVKLHGGCIDGPSRILAPLQ  113 (174)
Q Consensus        35 ~~~~~~~lg~G~~g~V~~~~-~~~~~~~avK~~~~~~~~~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~~~~~~~lv~~~  113 (174)
                      .|...+++|.|+||.||+|. ..++..+|+|.+.....    ---+|+.+|+.++  ||||+++.-+|......-     
T Consensus        25 ~~~~~~liG~GsFg~Vyq~~~~e~~~~vAIKKv~~d~r----~knrEl~im~~l~--HpNIV~L~~~f~~~~~~d-----   93 (364)
T KOG0658|consen   25 SYEAVRLIGSGSFGVVYQAKLRETEEEVAIKKVLQDKR----YKNRELQIMRKLD--HPNIVRLLYFFSSSTESD-----   93 (364)
T ss_pred             EEEeeEEEeecccceEEEEEEcCCCceeEEEEecCCCC----cCcHHHHHHHhcC--CcCeeeEEEEEEecCCCc-----
Confidence            47778999999999999999 56678999999864422    2347899999998  999999988886653320     


Q ss_pred             hhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhh
Q 039630          114 ASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHE  168 (174)
Q Consensus       114 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~  168 (174)
                        .-...+++++++..........   ...+..++...+.-+++|+++||+|||+
T Consensus        94 --~~~lnlVleymP~tL~~~~r~~---~~~~~~mp~~~iKLYt~Qlfrgl~yLh~  143 (364)
T KOG0658|consen   94 --EVYLNLVLEYMPETLYRVIRHY---TRANQRMPLLEIKLYTYQLFRGLAYLHS  143 (364)
T ss_pred             --hhHHHHHHHhchHHHHHHHHHH---hhcCCCCceeeeHHHHHHHHHHHHHHHh
Confidence              1124555566555443332211   1234467777888899999999999976

>cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C

Probab=99.56  E-value=4.3e-14  Score=103.99  Aligned_cols=117  Identities=20%  Similarity=0.150  Sum_probs=91.0

Q ss_pred             CeeecceecccCCeeEEEEE-EcCCCEEEEEEeecc---CccchhHHHHHHHHHhcccccCCCeeeeecceecCCCcccc
Q 039630           35 GFRTSNKIGEGGFGSVYKGR-LEDGTVVAVNVLSVE---SKQGETEFMSEVASMANINICHENLVKLHGGCIDGPSRILA  110 (174)
Q Consensus        35 ~~~~~~~lg~G~~g~V~~~~-~~~~~~~avK~~~~~---~~~~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~~~~~~~lv  110 (174)
                      +|...+.||+|+||.||+|. ..+++.+|+|+++..   .......+..|+.++..+. .|++++.+++.+...+..+++
T Consensus         1 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~-~~~~i~~~~~~~~~~~~~~lv   79 (324)
T cd05587           1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPG-KPPFLTQLHSCFQTMDRLYFV   79 (324)
T ss_pred             CceEEEEEeeccCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhcC-CCCceeeeEEEEEcCCEEEEE
Confidence            47788999999999999998 456789999999754   1234456778888888887 245688899999888888888


Q ss_pred             hhhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhcc
Q 039630          111 PLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEI  170 (174)
Q Consensus       111 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  170 (174)
                      +  ++.+++.+...+.                ....+++..+..++.|++.||.|||++.
T Consensus        80 ~--E~~~~g~L~~~~~----------------~~~~~~~~~~~~~~~qi~~al~~lH~~~  121 (324)
T cd05587          80 M--EYVNGGDLMYHIQ----------------QVGKFKEPHAVFYAAEIAIGLFFLHSKG  121 (324)
T ss_pred             E--cCCCCCcHHHHHH----------------HcCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            8  7777776655331                1224678888999999999999999864

Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory

>PTZ00266 NIMA-related protein kinase; Provisional

Probab=99.56  E-value=1.7e-14  Score=117.43  Aligned_cols=123  Identities=21%  Similarity=0.251  Sum_probs=94.8

Q ss_pred             hcCCeeecceecccCCeeEEEEE-EcCCCEEEEEEeeccC--ccchhHHHHHHHHHhcccccCCCeeeeecceecC--CC
Q 039630           32 ATNGFRTSNKIGEGGFGSVYKGR-LEDGTVVAVNVLSVES--KQGETEFMSEVASMANINICHENLVKLHGGCIDG--PS  106 (174)
Q Consensus        32 ~~~~~~~~~~lg~G~~g~V~~~~-~~~~~~~avK~~~~~~--~~~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~~~--~~  106 (174)
                      ..++|.+++.||+|+||.||++. ..++..+|+|++....  ......+..|+.++..++  ||||+++++.+...  ..
T Consensus        11 ~l~~YeIl~kLG~GgFGtVYLAkdk~tg~~vAlKvIk~~~l~e~~~~~~~~EI~IL~~L~--HPNIVrl~d~f~de~~~~   88 (1021)
T PTZ00266         11 RLNEYEVIKKIGNGRFGEVFLVKHKRTQEFFCWKAISYRGLKEREKSQLVIEVNVMRELK--HKNIVRYIDRFLNKANQK   88 (1021)
T ss_pred             ccCCEEEEEEEecCCCeEEEEEEECCCCeEEEEEEEeccccCHHHHHHHHHHHHHHHHcC--CCCcCeEEEEEEecCCCE
Confidence            44689999999999999999999 5567889999997542  234567889999999999  99999999988654  34


Q ss_pred             cccchhhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhcc
Q 039630          107 RILAPLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEI  170 (174)
Q Consensus       107 ~~lv~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  170 (174)
                      .++++  ++...+.|...+...            ......+++..++.++.||+.||+|||+..
T Consensus        89 lyIVM--EY~~gGSL~~lL~k~------------~~~~g~L~E~~Il~Ia~QIL~ALaYLHs~g  138 (1021)
T PTZ00266         89 LYILM--EFCDAGDLSRNIQKC------------YKMFGKIEEHAIVDITRQLLHALAYCHNLK  138 (1021)
T ss_pred             EEEEE--eCCCCCcHHHHHHHH------------hhccCCCCHHHHHHHHHHHHHHHHHHHhcc
Confidence            56666  777766665533110            111235889999999999999999999854

>cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1

Probab=99.55  E-value=4.5e-14  Score=103.10  Aligned_cols=138  Identities=20%  Similarity=0.279  Sum_probs=97.9

Q ss_pred             HHhhcCCeeecceecccCCeeEEEEEEc--------CCCEEEEEEeeccC-ccchhHHHHHHHHHhcc-cccCCCeeeee
Q 039630           29 LKIATNGFRTSNKIGEGGFGSVYKGRLE--------DGTVVAVNVLSVES-KQGETEFMSEVASMANI-NICHENLVKLH   98 (174)
Q Consensus        29 ~~~~~~~~~~~~~lg~G~~g~V~~~~~~--------~~~~~avK~~~~~~-~~~~~~~~~e~~~l~~l-~~~h~~i~~~~   98 (174)
                      +....++|.+.+.||+|+||.||.+...        .+..+|+|.++... ......+..|+.++..+ +  |+|+++++
T Consensus        13 ~~~~~~~~~i~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~~--h~~i~~~~   90 (307)
T cd05098          13 WEVPRDRLVLGKPLGEGCFGQVVMAEAIGLDKEKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGK--HKNIINLL   90 (307)
T ss_pred             ceeehHHeEEeeeeccCCCeeEEEeEEeccCCcccCccceEEEEeccCCCChHHHHHHHHHHHHHHHhcC--CCCEeeEE
Confidence            3444567999999999999999998731        23479999997542 23345688899999988 6  99999999


Q ss_pred             cceecCCCcccchhhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhcc
Q 039630           99 GGCIDGPSRILAPLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEI  170 (174)
Q Consensus        99 ~~~~~~~~~~lv~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  170 (174)
                      +.+...+..++++  ++...+.+...+........-............+++..++.++.|++.||+|||++.
T Consensus        91 ~~~~~~~~~~lv~--e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~g  160 (307)
T cd05098          91 GACTQDGPLYVIV--EYASKGNLREYLRARRPPGMEYCYNPTQVPEEQLSFKDLVSCAYQVARGMEYLASKK  160 (307)
T ss_pred             EEEecCCceEEEE--ecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            9999988888888  777777666544332111000000001112235788899999999999999999863

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>KOG0610 consensus Putative serine/threonine protein kinase [General function prediction only]

Probab=99.55  E-value=6.7e-15  Score=107.45  Aligned_cols=118  Identities=22%  Similarity=0.218  Sum_probs=95.4

Q ss_pred             CCeeecceecccCCeeEEEEEE-cCCCEEEEEEeeccC---ccchhHHHHHHHHHhcccccCCCeeeeecceecCCCccc
Q 039630           34 NGFRTSNKIGEGGFGSVYKGRL-EDGTVVAVNVLSVES---KQGETEFMSEVASMANINICHENLVKLHGGCIDGPSRIL  109 (174)
Q Consensus        34 ~~~~~~~~lg~G~~g~V~~~~~-~~~~~~avK~~~~~~---~~~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~~~~~~~l  109 (174)
                      +.|+.++.||.|.-|.||.++. .++..+|+|++.+..   .+...++..|.+||..++  ||-++.++..+.++...++
T Consensus        77 ~~f~llk~LG~GdiG~VyL~~l~~t~~~fAmKVmdK~~l~~rkKl~Ra~tE~eIL~~lD--HPFlPTLYa~fet~~~~cl  154 (459)
T KOG0610|consen   77 RHFRLLKRLGCGDIGTVYLVELRGTNCLFAMKVMDKESLASRKKLKRAQTEREILSLLD--HPFLPTLYASFETDKYSCL  154 (459)
T ss_pred             HHHHHHHHcCCCCceeEEEEEecCCCceEEEEEecHHHHhhhhHHHHHHHHHHHHHhcC--CCccchhhheeeccceeEE
Confidence            4578889999999999999994 456899999998662   333456788999999999  9999999999999888777


Q ss_pred             chhhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhc
Q 039630          110 APLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEE  169 (174)
Q Consensus       110 v~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~  169 (174)
                      ++  +|+.++.|.....              ......+++..+..++..|+.||+|||-.
T Consensus       155 ~m--eyCpGGdL~~Lrq--------------kQp~~~fse~~aRFYaAEvl~ALEYLHml  198 (459)
T KOG0610|consen  155 VM--EYCPGGDLHSLRQ--------------KQPGKRFSESAARFYAAEVLLALEYLHML  198 (459)
T ss_pred             EE--ecCCCccHHHHHh--------------hCCCCccchhhHHHHHHHHHHHHHHHHhh
Confidence            77  6666666655221              23445789999999999999999999963

>PHA03212 serine/threonine kinase US3; Provisional

Probab=99.55  E-value=2.5e-14  Score=107.84  Aligned_cols=111  Identities=17%  Similarity=0.211  Sum_probs=87.1

Q ss_pred             cCCeeecceecccCCeeEEEEE-EcCCCEEEEEEeeccCccchhHHHHHHHHHhcccccCCCeeeeecceecCCCcccch
Q 039630           33 TNGFRTSNKIGEGGFGSVYKGR-LEDGTVVAVNVLSVESKQGETEFMSEVASMANINICHENLVKLHGGCIDGPSRILAP  111 (174)
Q Consensus        33 ~~~~~~~~~lg~G~~g~V~~~~-~~~~~~~avK~~~~~~~~~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~~~~~~~lv~  111 (174)
                      .++|.+.+.||+|+||.||++. ..+++.||+|...      ...+.+|+.+++.++  ||||+++++.+......++++
T Consensus        91 ~~~y~~~~~lg~G~~g~V~~~~d~~~~~~vaiK~~~------~~~~~~E~~il~~l~--HpnIv~~~~~~~~~~~~~lv~  162 (391)
T PHA03212         91 KAGFSILETFTPGAEGFAFACIDNKTCEHVVIKAGQ------RGGTATEAHILRAIN--HPSIIQLKGTFTYNKFTCLIL  162 (391)
T ss_pred             cCCcEEEEEEcCCCCeEEEEEEECCCCCEEEEechh------hhhhHHHHHHHHhCC--CCCCCCEeEEEEECCeeEEEE
Confidence            3579999999999999999998 5678899999753      235678999999999  999999999998888777777


Q ss_pred             hhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhcc
Q 039630          112 LQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEI  170 (174)
Q Consensus       112 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  170 (174)
                        ++.. +.+...+                .....+++..++.++.|++.||+|||++.
T Consensus       163 --e~~~-~~L~~~l----------------~~~~~l~~~~~~~i~~qi~~aL~ylH~~~  202 (391)
T PHA03212        163 --PRYK-TDLYCYL----------------AAKRNIAICDILAIERSVLRAIQYLHENR  202 (391)
T ss_pred             --ecCC-CCHHHHH----------------HhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence              4332 2222211                11234788889999999999999999863

>cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2

Probab=99.55  E-value=4.5e-14  Score=102.97  Aligned_cols=134  Identities=23%  Similarity=0.332  Sum_probs=95.1

Q ss_pred             cCCeeecceecccCCeeEEEEEE-cCCC--EEEEEEeeccC-ccchhHHHHHHHHHhcc-cccCCCeeeeecceecCCCc
Q 039630           33 TNGFRTSNKIGEGGFGSVYKGRL-EDGT--VVAVNVLSVES-KQGETEFMSEVASMANI-NICHENLVKLHGGCIDGPSR  107 (174)
Q Consensus        33 ~~~~~~~~~lg~G~~g~V~~~~~-~~~~--~~avK~~~~~~-~~~~~~~~~e~~~l~~l-~~~h~~i~~~~~~~~~~~~~  107 (174)
                      .++|.+.+.||+|+||.||+|.. .++.  .+++|.++... ......+.+|+.++.++ +  |+|++++++.+...+..
T Consensus         6 ~~~~~~~~~lg~G~~g~V~~a~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~Ei~~l~~l~~--h~~iv~~~~~~~~~~~~   83 (303)
T cd05088           6 WNDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGH--HPNIINLLGACEHRGYL   83 (303)
T ss_pred             hhhceeeeeecCCCCceEEEEEEccCCceeeEEEEEecccCCHHHHHHHHHHHHHHHHhcC--CCCcceEEEEECCCCCc
Confidence            35788889999999999999984 3454  45777665332 23445688899999998 6  99999999999998888


Q ss_pred             ccchhhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhcc
Q 039630          108 ILAPLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEI  170 (174)
Q Consensus       108 ~lv~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  170 (174)
                      ++++  ++.+++.+...+...+....-............+++..++.++.|++.|++|||++.
T Consensus        84 ~lv~--e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~g  144 (303)
T cd05088          84 YLAI--EYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQ  144 (303)
T ss_pred             eEEE--EeCCCCcHHHHHHhcccccccccccccccccCcCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            8888  777777666544332221110000000112235788999999999999999999864

Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A

>cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like

Probab=99.55  E-value=9.5e-14  Score=100.13  Aligned_cols=118  Identities=23%  Similarity=0.330  Sum_probs=91.3

Q ss_pred             CeeecceecccCCeeEEEEE-EcCCCEEEEEEeeccC--ccchhHHHHHHHHHhcccccCCCeeeeecceecCCCcccch
Q 039630           35 GFRTSNKIGEGGFGSVYKGR-LEDGTVVAVNVLSVES--KQGETEFMSEVASMANINICHENLVKLHGGCIDGPSRILAP  111 (174)
Q Consensus        35 ~~~~~~~lg~G~~g~V~~~~-~~~~~~~avK~~~~~~--~~~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~~~~~~~lv~  111 (174)
                      +|+..+.||+|++|.||++. ..++..+++|.++...  ......+.+|+.++..++  |+|++++++.+..++..++++
T Consensus         1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~--h~~i~~~~~~~~~~~~~~~v~   78 (285)
T cd07861           1 DYTKIEKIGEGTYGVVYKGRNKKTGQIVAMKKIRLESEEEGVPSTAIREISLLKELQ--HPNIVCLQDVLMQESRLYLIF   78 (285)
T ss_pred             CceEeeEecccCceEEEEEEECCCCcEEEEEEeccccccCCchHHHHHHHHHHHhcC--CCCEeeeEEEEeeCCeEEEEE
Confidence            47788999999999999999 4578899999987542  223456788999999999  999999999999988888888


Q ss_pred             hhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhcc
Q 039630          112 LQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEI  170 (174)
Q Consensus       112 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  170 (174)
                        ++.. +.+...+..             ......+++..+..++.|++.||+|||++.
T Consensus        79 --e~~~-~~l~~~~~~-------------~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~  121 (285)
T cd07861          79 --EFLS-MDLKKYLDS-------------LPKGQYMDAELVKSYLYQILQGILFCHSRR  121 (285)
T ss_pred             --ecCC-CCHHHHHhc-------------CCCCCcCCHHHHHHHHHHHHHHHHHHHhCC
Confidence              5544 233221100             111235788999999999999999999864

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2

>cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1

Probab=99.55  E-value=2.8e-14  Score=102.92  Aligned_cols=113  Identities=19%  Similarity=0.216  Sum_probs=87.6

Q ss_pred             ecccCCeeEEEEE-EcCCCEEEEEEeeccCc---cchhHHHHHHHHHhcccccCCCeeeeecceecCCCcccchhhhhhh
Q 039630           42 IGEGGFGSVYKGR-LEDGTVVAVNVLSVESK---QGETEFMSEVASMANINICHENLVKLHGGCIDGPSRILAPLQASIE  117 (174)
Q Consensus        42 lg~G~~g~V~~~~-~~~~~~~avK~~~~~~~---~~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~~~~~~~lv~~~~~~~  117 (174)
                      ||+|+||.||++. ..+++.+|+|.+.....   .....+..|+.+++.++  |+|++++.+.+...+..++++  ++.+
T Consensus         1 lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~--~~~i~~~~~~~~~~~~~~lv~--e~~~   76 (280)
T cd05608           1 LGKGGFGEVSACQMRATGKLYACKKLNKKRLKKRKGYEGAMVEKRILAKVH--SRFIVSLAYAFQTKTDLCLVM--TIMN   76 (280)
T ss_pred             CCCCCceeEEEEEEccCCcEEEEEeeeHHHHhhhHHHHHHHHHHHHHHhCC--CCcEeeeeEEEcCCCeEEEEE--eCCC
Confidence            6899999999998 55788999999975421   22345678999999999  999999999998888888888  6666


Q ss_pred             hhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhcc
Q 039630          118 ALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEI  170 (174)
Q Consensus       118 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  170 (174)
                      ++.+...+...            ......+++..+..++.|++.||+|||++.
T Consensus        77 ~g~L~~~~~~~------------~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~  117 (280)
T cd05608          77 GGDLRYHIYNV------------DEENPGFPEPRACFYTAQIISGLEHLHQRR  117 (280)
T ss_pred             CCCHHHHHHhc------------cccCCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            66665432110            112335789999999999999999999864

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g

>cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1

Probab=99.55  E-value=3.1e-14  Score=101.73  Aligned_cols=116  Identities=22%  Similarity=0.334  Sum_probs=92.8

Q ss_pred             CeeecceecccCCeeEEEEE-EcCCCEEEEEEeeccCc------cchhHHHHHHHHHhcccccCCCeeeeecceecCCCc
Q 039630           35 GFRTSNKIGEGGFGSVYKGR-LEDGTVVAVNVLSVESK------QGETEFMSEVASMANINICHENLVKLHGGCIDGPSR  107 (174)
Q Consensus        35 ~~~~~~~lg~G~~g~V~~~~-~~~~~~~avK~~~~~~~------~~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~~~~~~  107 (174)
                      +|+..+.||+|++|.||.+. ..++..+++|.++....      .....+.+|+.+++.++  |+|++++++.+...+..
T Consensus         1 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~alk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~--h~~iv~~~~~~~~~~~~   78 (268)
T cd06630           1 EWLKGQQLGTGAFSSCYQARDVKTGTLMAVKQVTYVRNTSSEQEEVVEALRKEIRLMARLN--HPHIIRMLGATCEDSHF   78 (268)
T ss_pred             CccccceecCcCceEEEEEEEcCCCcEEEEEEeecccCCchhHHHHHHHHHHHHHHHHHcC--CCceehhhceeccCCeE
Confidence            36677899999999999998 56789999999974421      12456889999999999  99999999999998888


Q ss_pred             ccchhhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhcc
Q 039630          108 ILAPLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEI  170 (174)
Q Consensus       108 ~lv~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  170 (174)
                      ++++  ++..++.+...+.                ....+++..+..++.|++.||.|||++.
T Consensus        79 ~~v~--e~~~~~~L~~~l~----------------~~~~~~~~~~~~~~~ql~~al~~LH~~~  123 (268)
T cd06630          79 NLFV--EWMAGGSVSHLLS----------------KYGAFKEAVIINYTEQLLRGLSYLHENQ  123 (268)
T ss_pred             EEEE--eccCCCcHHHHHH----------------HhCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            8888  6666666554321                1124678888999999999999999864

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their

>cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase

Probab=99.55  E-value=4.7e-14  Score=102.16  Aligned_cols=117  Identities=25%  Similarity=0.304  Sum_probs=94.5

Q ss_pred             CCeeecceecccCCeeEEEEE-EcCCCEEEEEEeeccC---ccchhHHHHHHHHHhcccccCCCeeeeecceecCCCccc
Q 039630           34 NGFRTSNKIGEGGFGSVYKGR-LEDGTVVAVNVLSVES---KQGETEFMSEVASMANINICHENLVKLHGGCIDGPSRIL  109 (174)
Q Consensus        34 ~~~~~~~~lg~G~~g~V~~~~-~~~~~~~avK~~~~~~---~~~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~~~~~~~l  109 (174)
                      ++|++.+.||+|+||.||++. ..+++.+++|.++...   ......+.+|+.++++++  |+|++++++.+...+..++
T Consensus         1 ~~y~~~~~ig~g~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~--h~~i~~~~~~~~~~~~~~~   78 (290)
T cd05580           1 DDFEFIKTLGTGSFGRVMLVRHKGSGKYYALKILSKAKIVKLKQVEHVLNEKRILQSIR--HPFLVNLYGSFQDDSNLYL   78 (290)
T ss_pred             CceEEEEEeecCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCC--CCCccceeeEEEcCCeEEE
Confidence            368889999999999999998 4568999999997542   234566889999999999  9999999999998888888


Q ss_pred             chhhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhcc
Q 039630          110 APLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEI  170 (174)
Q Consensus       110 v~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  170 (174)
                      ++  ++..++.+...+.                ....++...+..++.|++.||.|||++.
T Consensus        79 v~--e~~~~~~L~~~~~----------------~~~~l~~~~~~~~~~qil~~l~~lH~~~  121 (290)
T cd05580          79 VM--EYVPGGELFSHLR----------------KSGRFPEPVARFYAAQVVLALEYLHSLD  121 (290)
T ss_pred             EE--ecCCCCCHHHHHH----------------HcCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            88  6666666654331                1235788888899999999999999854

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi

>PTZ00267 NIMA-related protein kinase; Provisional

Probab=99.55  E-value=2.2e-14  Score=110.71  Aligned_cols=119  Identities=13%  Similarity=0.091  Sum_probs=95.0

Q ss_pred             CeeecceecccCCeeEEEEE-EcC-CCEEEEEEeeccCccchhHHHHHHHHHhcccccCCCeeeeecceecCCCcccchh
Q 039630           35 GFRTSNKIGEGGFGSVYKGR-LED-GTVVAVNVLSVESKQGETEFMSEVASMANINICHENLVKLHGGCIDGPSRILAPL  112 (174)
Q Consensus        35 ~~~~~~~lg~G~~g~V~~~~-~~~-~~~~avK~~~~~~~~~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~~~~~~~lv~~  112 (174)
                      .|.+.+.||+|+||.||.+. ..+ +..+++|.+..........+.+|+.++..++  ||||+++++.+...+..++++ 
T Consensus        68 ~y~~~~~lg~G~~g~vy~a~~~~~~~~~vv~K~~~~~~~~~~~~~~~E~~~l~~l~--Hpniv~~~~~~~~~~~~~lv~-  144 (478)
T PTZ00267         68 MYVLTTLVGRNPTTAAFVATRGSDPKEKVVAKFVMLNDERQAAYARSELHCLAACD--HFGIVKHFDDFKSDDKLLLIM-  144 (478)
T ss_pred             eEEEEEEEEeCCCcEEEEEEEcCCCCeEEEEEEcccCCHHHHHHHHHHHHHHHhCC--CCCEeEEEEEEEECCEEEEEE-
Confidence            38899999999999999998 334 6788898876554444556788999999999  999999999999999999988 


Q ss_pred             hhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhc
Q 039630          113 QASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEE  169 (174)
Q Consensus       113 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~  169 (174)
                       ++.+++.|...+...            ......+++..+..++.|++.||.|||++
T Consensus       145 -E~~~gg~L~~~l~~~------------~~~~~~l~~~~~~~i~~qi~~aL~~lH~~  188 (478)
T PTZ00267        145 -EYGSGGDLNKQIKQR------------LKEHLPFQEYEVGLLFYQIVLALDEVHSR  188 (478)
T ss_pred             -ECCCCCCHHHHHHHH------------HhccCCCCHHHHHHHHHHHHHHHHHHHhC
Confidence             777777776533110            12233578888889999999999999975

>cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha

Probab=99.55  E-value=4.2e-14  Score=104.39  Aligned_cols=118  Identities=19%  Similarity=0.151  Sum_probs=93.2

Q ss_pred             CCeeecceecccCCeeEEEEE-EcCCCEEEEEEeecc---CccchhHHHHHHHHHhcccccCCCeeeeecceecCCCccc
Q 039630           34 NGFRTSNKIGEGGFGSVYKGR-LEDGTVVAVNVLSVE---SKQGETEFMSEVASMANINICHENLVKLHGGCIDGPSRIL  109 (174)
Q Consensus        34 ~~~~~~~~lg~G~~g~V~~~~-~~~~~~~avK~~~~~---~~~~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~~~~~~~l  109 (174)
                      ++|.+.+.||+|+||.||++. ..++..+|+|++...   .......+..|+.++..++  |++++.+.+.+...+..++
T Consensus         1 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~--~~~i~~~~~~~~~~~~~~l   78 (332)
T cd05623           1 EDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGD--NQWITTLHYAFQDENNLYL   78 (332)
T ss_pred             CCceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEeHHHHHHhhHHHHHHHHHHHHhhCC--CCCEeeEEEEEecCCEEEE
Confidence            368889999999999999998 445788999999643   1223445778888999888  9999999999999998888


Q ss_pred             chhhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhcc
Q 039630          110 APLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEI  170 (174)
Q Consensus       110 v~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  170 (174)
                      ++  ++..++.+...+..               ....+++..+..++.|++.||.|||++.
T Consensus        79 v~--ey~~~g~L~~~l~~---------------~~~~l~~~~~~~~~~qi~~al~~lH~~~  122 (332)
T cd05623          79 VM--DYYVGGDLLTLLSK---------------FEDRLPEDMARFYLAEMVIAIDSVHQLH  122 (332)
T ss_pred             EE--eccCCCcHHHHHHH---------------hcCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            88  77777776654311               1224788888899999999999999753

Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw

>PHA02988 hypothetical protein; Provisional

Probab=99.55  E-value=9.5e-14  Score=100.40  Aligned_cols=125  Identities=20%  Similarity=0.236  Sum_probs=92.0

Q ss_pred             cccceechhhHHhhcCCeeecceecccCCeeEEEEEEcCCCEEEEEEeeccCccc---hhHHHHHHHHHhcccccCCCee
Q 039630           19 YKFSKISYNELKIATNGFRTSNKIGEGGFGSVYKGRLEDGTVVAVNVLSVESKQG---ETEFMSEVASMANINICHENLV   95 (174)
Q Consensus        19 ~~~~~~~~~~~~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~avK~~~~~~~~~---~~~~~~e~~~l~~l~~~h~~i~   95 (174)
                      .++..++.+++...     ....+|+|+++.||+|.. +|..||+|.++......   .+.+.+|+.++.+++  ||||+
T Consensus        10 ~~~~~i~~~~i~~~-----~~~~i~~g~~~~v~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~--h~nIv   81 (283)
T PHA02988         10 NDIKCIESDDIDKY-----TSVLIKENDQNSIYKGIF-NNKEVIIRTFKKFHKGHKVLIDITENEIKNLRRID--SNNIL   81 (283)
T ss_pred             CcceecCHHHcCCC-----CCeEEeeCCceEEEEEEE-CCEEEEEEeccccccccHHHHHHHHHHHHHHHhcC--CCCEE
Confidence            34445555555321     125789999999999987 58899999997553322   466789999999999  99999


Q ss_pred             eeecceec--C--CCcccchhhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhc
Q 039630           96 KLHGGCID--G--PSRILAPLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEE  169 (174)
Q Consensus        96 ~~~~~~~~--~--~~~~lv~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~  169 (174)
                      ++++.+..  .  ...++++  ++..++.|...+.                ....+++.....++.|++.||.|||+.
T Consensus        82 ~~~g~~~~~~~~~~~~~lv~--Ey~~~g~L~~~l~----------------~~~~~~~~~~~~i~~~i~~~l~~lH~~  141 (283)
T PHA02988         82 KIYGFIIDIVDDLPRLSLIL--EYCTRGYLREVLD----------------KEKDLSFKTKLDMAIDCCKGLYNLYKY  141 (283)
T ss_pred             EEeeeEEecccCCCceEEEE--EeCCCCcHHHHHh----------------hCCCCChhHHHHHHHHHHHHHHHHHhc
Confidence            99999876  2  3445555  7777766665331                122467888889999999999999974

>cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase

Probab=99.55  E-value=4.1e-14  Score=104.09  Aligned_cols=111  Identities=21%  Similarity=0.248  Sum_probs=88.2

Q ss_pred             ceecccCCeeEEEEEE----cCCCEEEEEEeeccC----ccchhHHHHHHHHHhcccccCCCeeeeecceecCCCcccch
Q 039630           40 NKIGEGGFGSVYKGRL----EDGTVVAVNVLSVES----KQGETEFMSEVASMANINICHENLVKLHGGCIDGPSRILAP  111 (174)
Q Consensus        40 ~~lg~G~~g~V~~~~~----~~~~~~avK~~~~~~----~~~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~~~~~~~lv~  111 (174)
                      +.||+|+||.||++..    .++..+|+|+++...    ......+..|+.+++.++  |+||+++++.+...+..++++
T Consensus         2 ~~lg~G~~g~V~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~il~~l~--hp~iv~~~~~~~~~~~~~lv~   79 (323)
T cd05584           2 KVLGKGGYGKVFQVRKVTGADTGKIFAMKVLKKATIVRNQKDTAHTKAERNILEAVK--HPFIVDLIYAFQTGGKLYLIL   79 (323)
T ss_pred             ceeeecCCeEEEEEEEcccCCCCCEEEEEEEEHHHHHhhhhhHHHHHHHHHHHHhCC--CCchhceeeEEecCCeEEEEE
Confidence            6799999999999883    357899999997531    223445778999999999  999999999999988888888


Q ss_pred             hhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhcc
Q 039630          112 LQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEI  170 (174)
Q Consensus       112 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  170 (174)
                        ++..++.+...+.                ....+++..+..++.|++.||.|||++.
T Consensus        80 --e~~~~~~L~~~~~----------------~~~~~~~~~~~~~~~qi~~~l~~lH~~~  120 (323)
T cd05584          80 --EYLSGGELFMHLE----------------REGIFMEDTACFYLSEISLALEHLHQQG  120 (323)
T ss_pred             --eCCCCchHHHHHH----------------HcCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence              7777777765431                1224677788889999999999999864

Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in

>cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1

Probab=99.55  E-value=5.5e-14  Score=102.18  Aligned_cols=117  Identities=15%  Similarity=0.237  Sum_probs=96.0

Q ss_pred             cCCeeecceecccCCeeEEEEE-EcCCCEEEEEEeeccCccchhHHHHHHHHHhcccccCCCeeeeecceecCCCcccch
Q 039630           33 TNGFRTSNKIGEGGFGSVYKGR-LEDGTVVAVNVLSVESKQGETEFMSEVASMANINICHENLVKLHGGCIDGPSRILAP  111 (174)
Q Consensus        33 ~~~~~~~~~lg~G~~g~V~~~~-~~~~~~~avK~~~~~~~~~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~~~~~~~lv~  111 (174)
                      ..+|+..+.||+|+||.||++. ..++..+++|.+..........+.+|+.+++.++  |+|++++.+.+...+..++++
T Consensus        19 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~e~~~l~~~~--h~~v~~~~~~~~~~~~~~lv~   96 (296)
T cd06654          19 KKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENK--NPNIVNYLDSYLVGDELWVVM   96 (296)
T ss_pred             ccceeeEEEecCCCCeEEEEEEECCCCcEEEEEEEecCCcchHHHHHHHHHHHHhCC--CCCEeeEEEEEEeCCEEEEee
Confidence            3578999999999999999998 4568899999998665555677889999999998  999999999999888888888


Q ss_pred             hhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhcc
Q 039630          112 LQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEI  170 (174)
Q Consensus       112 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  170 (174)
                        ++.+++.+.....                 ...+++..+..++.|++.||+|||+..
T Consensus        97 --e~~~~~~L~~~~~-----------------~~~~~~~~~~~i~~ql~~aL~~LH~~g  136 (296)
T cd06654          97 --EYLAGGSLTDVVT-----------------ETCMDEGQIAAVCRECLQALEFLHSNQ  136 (296)
T ss_pred             --cccCCCCHHHHHH-----------------hcCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence              7666666654221                 123678888999999999999999864

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3

Probab=99.55  E-value=5.2e-14  Score=102.35  Aligned_cols=117  Identities=15%  Similarity=0.239  Sum_probs=96.4

Q ss_pred             cCCeeecceecccCCeeEEEEE-EcCCCEEEEEEeeccCccchhHHHHHHHHHhcccccCCCeeeeecceecCCCcccch
Q 039630           33 TNGFRTSNKIGEGGFGSVYKGR-LEDGTVVAVNVLSVESKQGETEFMSEVASMANINICHENLVKLHGGCIDGPSRILAP  111 (174)
Q Consensus        33 ~~~~~~~~~lg~G~~g~V~~~~-~~~~~~~avK~~~~~~~~~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~~~~~~~lv~  111 (174)
                      .++|...+.||+|+||.||++. ..++..+++|.+..........+..|+.+++.++  |+|++++++.+...+..++++
T Consensus        18 ~~~y~~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~~~--h~~i~~~~~~~~~~~~~~lv~   95 (297)
T cd06656          18 KKKYTRFEKIGQGASGTVYTAIDIATGQEVAIKQMNLQQQPKKELIINEILVMRENK--NPNIVNYLDSYLVGDELWVVM   95 (297)
T ss_pred             hhhceeeeeeccCCCeEEEEEEECCCCCEEEEEEEecCccchHHHHHHHHHHHHhCC--CCCEeeEEEEEecCCEEEEee
Confidence            3578999999999999999998 5678999999997665555667889999999998  999999999999888888888


Q ss_pred             hhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhcc
Q 039630          112 LQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEI  170 (174)
Q Consensus       112 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  170 (174)
                        ++.+++.+.....                 ...+++..+..++.|++.||.|||+..
T Consensus        96 --e~~~~~~L~~~~~-----------------~~~~~~~~~~~~~~~l~~~L~~LH~~~  135 (297)
T cd06656          96 --EYLAGGSLTDVVT-----------------ETCMDEGQIAAVCRECLQALDFLHSNQ  135 (297)
T ss_pred             --cccCCCCHHHHHH-----------------hCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence              7776666655321                 123678888999999999999999753

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors

Probab=99.55  E-value=4.4e-14  Score=101.08  Aligned_cols=118  Identities=26%  Similarity=0.405  Sum_probs=91.7

Q ss_pred             CCeeecceecccCCeeEEEEEEc-C---CCEEEEEEeeccC-ccchhHHHHHHHHHhcccccCCCeeeeecceecCCCcc
Q 039630           34 NGFRTSNKIGEGGFGSVYKGRLE-D---GTVVAVNVLSVES-KQGETEFMSEVASMANINICHENLVKLHGGCIDGPSRI  108 (174)
Q Consensus        34 ~~~~~~~~lg~G~~g~V~~~~~~-~---~~~~avK~~~~~~-~~~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~~~~~~~  108 (174)
                      .+|++.+.||+|+||.||++... +   +..+++|.++... ......+..|+.++.+++  |||++++++.+...+..+
T Consensus         4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~--h~~i~~~~~~~~~~~~~~   81 (267)
T cd05066           4 SCIKIEKVIGAGEFGEVCSGRLKLPGKREIPVAIKTLKAGYTEKQRRDFLSEASIMGQFD--HPNIIHLEGVVTKSKPVM   81 (267)
T ss_pred             HHeEeeeeecccCCCceEEEEEecCCCCceEEEEEECCCCCCHHHHHHHHHHHHHHHhCC--CCCcceEEEEEecCCccE
Confidence            46888899999999999999842 2   3378999886542 233567889999999998  999999999998888888


Q ss_pred             cchhhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhcc
Q 039630          109 LAPLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEI  170 (174)
Q Consensus       109 lv~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  170 (174)
                      +++  ++.+++.+...+.               .....+++..+..++.|++.||.|||++.
T Consensus        82 lv~--e~~~~~~L~~~~~---------------~~~~~~~~~~~~~i~~~i~~~l~~lH~~~  126 (267)
T cd05066          82 IVT--EYMENGSLDAFLR---------------KHDGQFTVIQLVGMLRGIASGMKYLSDMG  126 (267)
T ss_pred             EEE--EcCCCCCHHHHHH---------------hcCCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            887  6666666554331               11124688888999999999999999753

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul

>cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors

Probab=99.55  E-value=4.2e-14  Score=101.27  Aligned_cols=118  Identities=28%  Similarity=0.450  Sum_probs=92.5

Q ss_pred             CCeeecceecccCCeeEEEEEEc-CC---CEEEEEEeecc-CccchhHHHHHHHHHhcccccCCCeeeeecceecCCCcc
Q 039630           34 NGFRTSNKIGEGGFGSVYKGRLE-DG---TVVAVNVLSVE-SKQGETEFMSEVASMANINICHENLVKLHGGCIDGPSRI  108 (174)
Q Consensus        34 ~~~~~~~~lg~G~~g~V~~~~~~-~~---~~~avK~~~~~-~~~~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~~~~~~~  108 (174)
                      ++|++.+.||+|+||.||+|... ++   ..+++|.++.. .......+..|+.+++.++  |+|++++.+.+...+..+
T Consensus         4 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~--h~ni~~~~~~~~~~~~~~   81 (269)
T cd05065           4 SCVKIEEVIGAGEFGEVCRGRLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFD--HPNIIHLEGVVTKSRPVM   81 (269)
T ss_pred             HHeEEEeEecCCCCCeEEEEEEecCCCCceeEEEEEcCCCCCHHHHHHHHHHHHHHHhCC--CcCcceEEEEECCCCceE
Confidence            46788899999999999999843 33   36999998754 2334567899999999999  999999999998888888


Q ss_pred             cchhhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhcc
Q 039630          109 LAPLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEI  170 (174)
Q Consensus       109 lv~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  170 (174)
                      +++  ++.+++.+...+.               .....+++..++.++.|++.|+.|||++.
T Consensus        82 lv~--e~~~~~~L~~~l~---------------~~~~~~~~~~~~~i~~~l~~al~~lH~~g  126 (269)
T cd05065          82 IIT--EFMENGALDSFLR---------------QNDGQFTVIQLVGMLRGIAAGMKYLSEMN  126 (269)
T ss_pred             EEE--ecCCCCcHHHHHh---------------hCCCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            887  6666665544321               11224788889999999999999999864

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr

>cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta

Probab=99.55  E-value=5.7e-14  Score=103.34  Aligned_cols=117  Identities=19%  Similarity=0.150  Sum_probs=90.1

Q ss_pred             CeeecceecccCCeeEEEEE-EcCCCEEEEEEeeccC---ccchhHHHHHHHHHhcccccCCCeeeeecceecCCCcccc
Q 039630           35 GFRTSNKIGEGGFGSVYKGR-LEDGTVVAVNVLSVES---KQGETEFMSEVASMANINICHENLVKLHGGCIDGPSRILA  110 (174)
Q Consensus        35 ~~~~~~~lg~G~~g~V~~~~-~~~~~~~avK~~~~~~---~~~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~~~~~~~lv  110 (174)
                      +|...+.||+|+||.||++. ..++..+|+|+++...   .........|..++..+. .|++++.+.+.+...+..+++
T Consensus         1 df~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~-~~~~i~~~~~~~~~~~~~~lv   79 (323)
T cd05616           1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALSG-KPPFLTQLHSCFQTMDRLYFV   79 (323)
T ss_pred             CceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhcc-CCCeEeeEEEEEecCCEEEEE
Confidence            47788999999999999998 4567899999997542   222344666777777664 389999999999888888888


Q ss_pred             hhhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhcc
Q 039630          111 PLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEI  170 (174)
Q Consensus       111 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  170 (174)
                      +  ++.+++.+...+.                ....+++..+..++.|++.||+|||++.
T Consensus        80 ~--E~~~~g~L~~~~~----------------~~~~~~~~~~~~~~~qi~~aL~~LH~~~  121 (323)
T cd05616          80 M--EYVNGGDLMYQIQ----------------QVGRFKEPHAVFYAAEIAIGLFFLHSKG  121 (323)
T ss_pred             E--cCCCCCCHHHHHH----------------HcCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            8  7777776655331                1224788889999999999999999853

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and

>cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2

Probab=99.55  E-value=3.9e-14  Score=103.25  Aligned_cols=136  Identities=19%  Similarity=0.286  Sum_probs=97.8

Q ss_pred             hhcCCeeecceecccCCeeEEEEEE--------cCCCEEEEEEeecc-CccchhHHHHHHHHHhcc-cccCCCeeeeecc
Q 039630           31 IATNGFRTSNKIGEGGFGSVYKGRL--------EDGTVVAVNVLSVE-SKQGETEFMSEVASMANI-NICHENLVKLHGG  100 (174)
Q Consensus        31 ~~~~~~~~~~~lg~G~~g~V~~~~~--------~~~~~~avK~~~~~-~~~~~~~~~~e~~~l~~l-~~~h~~i~~~~~~  100 (174)
                      ....+|.+.+.||+|+||.||.+..        .++..+++|.++.. .......+.+|+.++..+ +  |+||+++++.
T Consensus        12 ~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~~--h~~i~~~~~~   89 (304)
T cd05101          12 FSRDKLTLGKPLGEGCFGQVVMAEALGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGK--HKNIINLLGA   89 (304)
T ss_pred             ccHHHeeecceeeccCCceEEEEEEeccCCCCCCcceeEEeeecccccchHHHHHHHHHHHHHHhhcc--CCCchheeEE
Confidence            3445688889999999999999873        12447899988744 233456788999999998 6  9999999999


Q ss_pred             eecCCCcccchhhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhcc
Q 039630          101 CIDGPSRILAPLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEI  170 (174)
Q Consensus       101 ~~~~~~~~lv~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  170 (174)
                      +......++++  ++...+.+...+.....................+++..+..++.|++.||.|||++.
T Consensus        90 ~~~~~~~~lv~--e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~g  157 (304)
T cd05101          90 CTQDGPLYVIV--EYASKGNLREYLRARRPPGMEYSYDIARVPDEQMTFKDLVSCTYQVARGMEYLASQK  157 (304)
T ss_pred             EecCCceEEEE--ecCCCCcHHHHHHhcCCcccccccccccCCcccccHHHHHHHHHHHHHHHHHHHHCC
Confidence            99988888888  777777766554432211110000000112235788889999999999999999864

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6

Probab=99.55  E-value=1.7e-13  Score=98.69  Aligned_cols=119  Identities=18%  Similarity=0.291  Sum_probs=87.6

Q ss_pred             CCeeecceecccCCeeEEEEE-EcCCCEEEEEEeeccC-ccchhHHHHHHHH-HhcccccCCCeeeeecceecCCCcccc
Q 039630           34 NGFRTSNKIGEGGFGSVYKGR-LEDGTVVAVNVLSVES-KQGETEFMSEVAS-MANINICHENLVKLHGGCIDGPSRILA  110 (174)
Q Consensus        34 ~~~~~~~~lg~G~~g~V~~~~-~~~~~~~avK~~~~~~-~~~~~~~~~e~~~-l~~l~~~h~~i~~~~~~~~~~~~~~lv  110 (174)
                      ++|...+.||+|+||.||++. ..+|..+|+|.++... ......+..|+.+ ++..+  |+|++++++.+...+..+++
T Consensus         1 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~~~--~~~iv~~~~~~~~~~~~~lv   78 (283)
T cd06617           1 DDLEVIEELGRGAYGVVDKMRHVPTGTIMAVKRIRATVNSQEQKRLLMDLDISMRSVD--CPYTVTFYGALFREGDVWIC   78 (283)
T ss_pred             CCceEEEEecccCCeEEEEEEEcCCCcEEEEEEEecCCCcHHHHHHHHHHHHHHHHcC--CCCeeeeeEEEecCCcEEEE
Confidence            368888999999999999998 4578999999997552 2233455666664 55566  99999999999998888888


Q ss_pred             hhhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhc
Q 039630          111 PLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEE  169 (174)
Q Consensus       111 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~  169 (174)
                      +  ++.++ .+...+..            .......+++..+..++.|++.||+|||++
T Consensus        79 ~--e~~~~-~l~~~l~~------------~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~  122 (283)
T cd06617          79 M--EVMDT-SLDKFYKK------------VYDKGLTIPEDILGKIAVSIVKALEYLHSK  122 (283)
T ss_pred             h--hhhcc-cHHHHHHH------------hccCCCCCCHHHHHHHHHHHHHHHHHHhhc
Confidence            8  55442 22221110            011223578999999999999999999986

Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs

>cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5

Probab=99.55  E-value=5.7e-14  Score=101.55  Aligned_cols=117  Identities=22%  Similarity=0.260  Sum_probs=91.2

Q ss_pred             eeecceecccCCeeEEEEE-EcCCCEEEEEEeeccC---ccchhHHHHHHHHHhcccccCCCeeeeecceecCCCcccch
Q 039630           36 FRTSNKIGEGGFGSVYKGR-LEDGTVVAVNVLSVES---KQGETEFMSEVASMANINICHENLVKLHGGCIDGPSRILAP  111 (174)
Q Consensus        36 ~~~~~~lg~G~~g~V~~~~-~~~~~~~avK~~~~~~---~~~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~~~~~~~lv~  111 (174)
                      |+..+.||+|+||.||.+. ..+++.+|+|.+....   ......+.+|+.+++.++  |++++.+.+.+...+..++++
T Consensus         2 ~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~--~~~i~~~~~~~~~~~~~~lv~   79 (285)
T cd05632           2 FRQYRVLGKGGFGEVCACQVRATGKMYACKRLEKKRIKKRKGESMALNEKQILEKVN--SQFVVNLAYAYETKDALCLVL   79 (285)
T ss_pred             ceEEEEEecCCCeEEEEEEECCCCcEEEEEEeehhhhhhhhHHHHHHHHHHHHHHcC--CcCceeEEEEEecCCEEEEEE
Confidence            5667889999999999998 4578899999997542   122345778999999998  999999999999888888888


Q ss_pred             hhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhcc
Q 039630          112 LQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEI  170 (174)
Q Consensus       112 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  170 (174)
                        ++..++.+......              .....+++..+..++.|++.||.|||+..
T Consensus        80 --e~~~~~~L~~~~~~--------------~~~~~~~~~~~~~~~~ql~~~l~~lH~~~  122 (285)
T cd05632          80 --TIMNGGDLKFHIYN--------------MGNPGFEEERALFYAAEILCGLEDLHREN  122 (285)
T ss_pred             --EeccCccHHHHHHH--------------hcCCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence              66666655432211              11224789999999999999999999754

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with

>KOG0586 consensus Serine/threonine protein kinase [General function prediction only]

Probab=99.54  E-value=3.2e-14  Score=108.23  Aligned_cols=118  Identities=23%  Similarity=0.260  Sum_probs=98.8

Q ss_pred             cCCeeecceecccCCeeEEEEE-EcCCCEEEEEEeeccC--ccchhHHHHHHHHHhcccccCCCeeeeecceecCCCccc
Q 039630           33 TNGFRTSNKIGEGGFGSVYKGR-LEDGTVVAVNVLSVES--KQGETEFMSEVASMANINICHENLVKLHGGCIDGPSRIL  109 (174)
Q Consensus        33 ~~~~~~~~~lg~G~~g~V~~~~-~~~~~~~avK~~~~~~--~~~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~~~~~~~l  109 (174)
                      ...|.+.+.||+|.|+.|..+. .-++..||+|++++..  ......+.+|+.+|..++  ||||++++++...+..+++
T Consensus        55 vg~y~i~~tig~g~f~~V~La~~~~t~~~VaiK~idkt~ln~~~~~k~~rev~imk~l~--HPnIvkl~~v~~t~~~lyl  132 (596)
T KOG0586|consen   55 VGLYVIIKTIGKGNFAKVKLARHILTGTEVAIKIIDKTQLNPSKRQKLGREVDIMKSLN--HPNIVKLFSVIETEATLYL  132 (596)
T ss_pred             ccceeeeeeeccceeEEEEeeEecCCCceEEEEEehhcccChHHHHHHHHHHHHHHhcC--CcceeeeeeeeeecceeEE
Confidence            3568999999999999999999 5568899999998662  333455899999999999  9999999999999999999


Q ss_pred             chhhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhcc
Q 039630          110 APLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEI  170 (174)
Q Consensus       110 v~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  170 (174)
                      |+  ++..++.++.++-                +..++.+.....++.|+..+++|+|+++
T Consensus       133 V~--eya~~ge~~~yl~----------------~~gr~~e~~ar~~F~q~vsaveYcH~k~  175 (596)
T KOG0586|consen  133 VM--EYASGGELFDYLV----------------KHGRMKEKEARAKFRQIVSAVEYCHSKN  175 (596)
T ss_pred             EE--EeccCchhHHHHH----------------hcccchhhhhhhhhHHHHHHHHHHhhcc
Confidence            99  7778888877652                2234556777789999999999999975

>cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase

Probab=99.54  E-value=1e-13  Score=100.40  Aligned_cols=118  Identities=24%  Similarity=0.345  Sum_probs=90.5

Q ss_pred             cCCeeecceecccCCeeEEEEE-EcCCCEEEEEEeeccCc-cchhHHHHHHHHHhcccccCCCeeeeecceecCCCcccc
Q 039630           33 TNGFRTSNKIGEGGFGSVYKGR-LEDGTVVAVNVLSVESK-QGETEFMSEVASMANINICHENLVKLHGGCIDGPSRILA  110 (174)
Q Consensus        33 ~~~~~~~~~lg~G~~g~V~~~~-~~~~~~~avK~~~~~~~-~~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~~~~~~~lv  110 (174)
                      +++|...+.||+|+||.||+|. ..++..+++|.++.... .....+.+|+.+++.++  |+|++++.+.+...+..+++
T Consensus         4 ~~~y~~~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~--h~ni~~~~~~~~~~~~~~lv   81 (291)
T cd07870           4 ATSYLNLEKLGEGSYATVYKGISRINGQLVALKVISMKTEEGVPFTAIREASLLKGLK--HANIVLLHDIIHTKETLTFV   81 (291)
T ss_pred             cceeEEEEEEEecCCEEEEEEEEcCCCcEEEEEEecccCcCCCcHHHHHHHHHHHhcC--CCCEeEEEEEEecCCeEEEE
Confidence            4679999999999999999998 45688999999975532 22345778999999999  99999999999888888888


Q ss_pred             hhhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhcc
Q 039630          111 PLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEI  170 (174)
Q Consensus       111 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  170 (174)
                      +  ++.. +.+...+.               .....+++..+..++.|++.||.|||++.
T Consensus        82 ~--e~~~-~~l~~~~~---------------~~~~~~~~~~~~~~~~qi~~~L~~lH~~~  123 (291)
T cd07870          82 F--EYMH-TDLAQYMI---------------QHPGGLHPYNVRLFMFQLLRGLAYIHGQH  123 (291)
T ss_pred             E--eccc-CCHHHHHH---------------hCCCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            7  5543 23322221               11123567778889999999999999864

Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess

>cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3

Probab=99.54  E-value=7.7e-14  Score=99.09  Aligned_cols=118  Identities=16%  Similarity=0.182  Sum_probs=93.9

Q ss_pred             CeeecceecccCCeeEEEEE-EcCCCEEEEEEeecc-CccchhHHHHHHHHHhcccccCCCeeeeecceecCCCcccchh
Q 039630           35 GFRTSNKIGEGGFGSVYKGR-LEDGTVVAVNVLSVE-SKQGETEFMSEVASMANINICHENLVKLHGGCIDGPSRILAPL  112 (174)
Q Consensus        35 ~~~~~~~lg~G~~g~V~~~~-~~~~~~~avK~~~~~-~~~~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~~~~~~~lv~~  112 (174)
                      +|.+.+.||+|+||.||.+. ..++..+++|.++.. .....+.+..|+.+++.++  |+|++++.+.+...+..++++ 
T Consensus         1 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~--h~~i~~~~~~~~~~~~~~lv~-   77 (255)
T cd08219           1 QYNVLRVVGEGSFGRALLVQHVNSDQKYAMKEIRLPKSSSAVEDSRKEAVLLAKMK--HPNIVAFKESFEADGHLYIVM-   77 (255)
T ss_pred             CceEEEEeeccCCeEEEEEEEcCCCceEEEEEEEcCcchHHHHHHHHHHHHHHhCC--CCCcceEEEEEEECCEEEEEE-
Confidence            47788999999999999998 457889999998644 2334567888999999999  999999999999998888888 


Q ss_pred             hhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhcc
Q 039630          113 QASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEI  170 (174)
Q Consensus       113 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  170 (174)
                       ++.+++.+...+..              .....+++..+..++.|++.||.|||++.
T Consensus        78 -e~~~~~~l~~~~~~--------------~~~~~~~~~~~~~~~~~i~~al~~lH~~~  120 (255)
T cd08219          78 -EYCDGGDLMQKIKL--------------QRGKLFPEDTILQWFVQMCLGVQHIHEKR  120 (255)
T ss_pred             -eeCCCCcHHHHHHh--------------ccCCCCCHHHHHHHHHHHHHHHHHHhhCC
Confidence             77666666543311              11224678888999999999999999864

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati

>cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha

Probab=99.54  E-value=4.1e-14  Score=104.23  Aligned_cols=115  Identities=20%  Similarity=0.168  Sum_probs=89.3

Q ss_pred             ecceeccc--CCeeEEEEE-EcCCCEEEEEEeeccC--ccchhHHHHHHHHHhcccccCCCeeeeecceecCCCcccchh
Q 039630           38 TSNKIGEG--GFGSVYKGR-LEDGTVVAVNVLSVES--KQGETEFMSEVASMANINICHENLVKLHGGCIDGPSRILAPL  112 (174)
Q Consensus        38 ~~~~lg~G--~~g~V~~~~-~~~~~~~avK~~~~~~--~~~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~~~~~~~lv~~  112 (174)
                      ++++||+|  +|+.||++. ..+|..||+|.++...  ......+..|+.+++.++  ||||+++++.+..++..++++ 
T Consensus         2 ~~~~ig~G~~~~~~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~--hpniv~~~~~~~~~~~~~lv~-   78 (327)
T cd08227           2 LLTVIGRGFEDLMTVNLARYKPTGEYVTVRRINLEACTNEMVTFLQGELHVSKLFN--HPNIVPYRATFIADNELWVVT-   78 (327)
T ss_pred             hhhhccccccceEEEEEEeecccCcEEEEEEechhhccHHHHHHHHHHHHHHHhcC--CCCeeeEEEEEEECCEEEEEE-
Confidence            35789999  678899988 5678999999997552  223456778999999999  999999999999998888888 


Q ss_pred             hhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhcc
Q 039630          113 QASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEI  170 (174)
Q Consensus       113 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  170 (174)
                       ++.+.+.+...+..              .....+++..++.++.|++.||+|||++.
T Consensus        79 -e~~~~~~l~~~~~~--------------~~~~~l~~~~~~~i~~qi~~~L~~LH~~~  121 (327)
T cd08227          79 -SFMAYGSAKDLICT--------------HFMDGMSELAIAYILQGVLKALDYIHHMG  121 (327)
T ss_pred             -eccCCCcHHHHHHh--------------hccCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence             66666665543211              01123788889999999999999999864

Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype

>cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha

Probab=99.54  E-value=5.2e-14  Score=103.57  Aligned_cols=116  Identities=19%  Similarity=0.153  Sum_probs=90.1

Q ss_pred             eeecceecccCCeeEEEEE-EcCCCEEEEEEeeccC---ccchhHHHHHHHHHhcccccCCCeeeeecceecCCCcccch
Q 039630           36 FRTSNKIGEGGFGSVYKGR-LEDGTVVAVNVLSVES---KQGETEFMSEVASMANINICHENLVKLHGGCIDGPSRILAP  111 (174)
Q Consensus        36 ~~~~~~lg~G~~g~V~~~~-~~~~~~~avK~~~~~~---~~~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~~~~~~~lv~  111 (174)
                      |...+.||+|+||.||++. ..++..||+|+++...   ......+..|..++..+. .|++++.+.+++...+..++++
T Consensus         2 f~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~-~~~~i~~~~~~~~~~~~~~lv~   80 (323)
T cd05615           2 FNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALQD-KPPFLTQLHSCFQTVDRLYFVM   80 (323)
T ss_pred             ceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhcc-CCCchhheeeEEecCCEEEEEE
Confidence            5677899999999999998 5578899999997541   233455777888888775 3577888999998888888888


Q ss_pred             hhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhcc
Q 039630          112 LQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEI  170 (174)
Q Consensus       112 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  170 (174)
                        ++.+++.+...+.                ....+++..+..++.|++.||.|||++.
T Consensus        81 --Ey~~~g~L~~~i~----------------~~~~l~~~~~~~i~~qi~~al~~lH~~~  121 (323)
T cd05615          81 --EYVNGGDLMYHIQ----------------QVGKFKEPQAVFYAAEISVGLFFLHRRG  121 (323)
T ss_pred             --cCCCCCcHHHHHH----------------HcCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence              7777776655331                1234788999999999999999999863

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a

>cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases

Probab=99.54  E-value=1e-13  Score=100.28  Aligned_cols=117  Identities=24%  Similarity=0.363  Sum_probs=91.0

Q ss_pred             CCeeecceecccCCeeEEEEEE-cCCCEEEEEEeeccC-ccchhHHHHHHHHHhcccccCCCeeeeecceecCCCcccch
Q 039630           34 NGFRTSNKIGEGGFGSVYKGRL-EDGTVVAVNVLSVES-KQGETEFMSEVASMANINICHENLVKLHGGCIDGPSRILAP  111 (174)
Q Consensus        34 ~~~~~~~~lg~G~~g~V~~~~~-~~~~~~avK~~~~~~-~~~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~~~~~~~lv~  111 (174)
                      ++|+..+.||+|++|.||++.. .++..+++|.+.... ......+.+|+.+++.++  |+||+++.+.+...+..++++
T Consensus         5 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~E~~~l~~l~--h~~i~~~~~~~~~~~~~~lv~   82 (291)
T cd07844           5 ETYKKLDKLGEGSYATVYKGRSKLTGQLVALKEIRLEHEEGAPFTAIREASLLKDLK--HANIVTLHDIIHTKKTLTLVF   82 (291)
T ss_pred             cceeEEEEEeecCCeEEEEEEEcCCCcEEEEEEEecccccCCchhHHHHHHHHhhCC--CcceeeEEEEEecCCeEEEEE
Confidence            5688999999999999999994 468899999997542 222345678999999999  999999999999888888888


Q ss_pred             hhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhcc
Q 039630          112 LQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEI  170 (174)
Q Consensus       112 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  170 (174)
                        ++... .+...+.               .....+++..+..++.|++.||.|||++.
T Consensus        83 --e~~~~-~L~~~~~---------------~~~~~~~~~~~~~~~~ql~~al~~lH~~~  123 (291)
T cd07844          83 --EYLDT-DLKQYMD---------------DCGGGLSMHNVRLFLFQLLRGLAYCHQRR  123 (291)
T ss_pred             --ecCCC-CHHHHHH---------------hCCCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence              55543 3333221               11124678888999999999999999854

Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the

>cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta

Probab=99.54  E-value=4.1e-14  Score=106.91  Aligned_cols=96  Identities=23%  Similarity=0.351  Sum_probs=76.0

Q ss_pred             hHHhhcCCeeecceecccCCeeEEEEEEc------CCCEEEEEEeeccC-ccchhHHHHHHHHHhcccccCCCeeeeecc
Q 039630           28 ELKIATNGFRTSNKIGEGGFGSVYKGRLE------DGTVVAVNVLSVES-KQGETEFMSEVASMANINICHENLVKLHGG  100 (174)
Q Consensus        28 ~~~~~~~~~~~~~~lg~G~~g~V~~~~~~------~~~~~avK~~~~~~-~~~~~~~~~e~~~l~~l~~~h~~i~~~~~~  100 (174)
                      .|....++|.+.+.||+|+||.||++.+.      .+..||+|+++... ......+.+|+.++..+. .|+||+++++.
T Consensus        31 ~~~~~~~~~~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~E~~~l~~l~-~H~niv~~~~~  109 (401)
T cd05107          31 AWEMPRDNLVLGRTLGSGAFGRVVEATAHGLSHSQSTMKVAVKMLKSTARSSEKQALMSELKIMSHLG-PHLNIVNLLGA  109 (401)
T ss_pred             cceecHHHeehhhhccCCCceeEEEEEEcCCCCCCCceEEEEEecCCCCChhHHHHHHHHHHHHHhcC-CCCCeEEEEEE
Confidence            46666677888999999999999999843      24589999997542 233456889999999885 59999999999


Q ss_pred             eecCCCcccchhhhhhhhhhhhhhhh
Q 039630          101 CIDGPSRILAPLQASIEALFLFTKLW  126 (174)
Q Consensus       101 ~~~~~~~~lv~~~~~~~~~~l~~~~~  126 (174)
                      +...+..++++  ++..++.|...+.
T Consensus       110 ~~~~~~~~iv~--E~~~~g~L~~~l~  133 (401)
T cd05107         110 CTKGGPIYIIT--EYCRYGDLVDYLH  133 (401)
T ss_pred             EccCCCcEEEE--eccCCCcHHHHHH
Confidence            99988888888  7777777766543

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D

>cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3

Probab=99.54  E-value=6.9e-14  Score=103.31  Aligned_cols=139  Identities=20%  Similarity=0.275  Sum_probs=98.2

Q ss_pred             hHHhhcCCeeecceecccCCeeEEEEEEc--------CCCEEEEEEeeccC-ccchhHHHHHHHHHhcc-cccCCCeeee
Q 039630           28 ELKIATNGFRTSNKIGEGGFGSVYKGRLE--------DGTVVAVNVLSVES-KQGETEFMSEVASMANI-NICHENLVKL   97 (174)
Q Consensus        28 ~~~~~~~~~~~~~~lg~G~~g~V~~~~~~--------~~~~~avK~~~~~~-~~~~~~~~~e~~~l~~l-~~~h~~i~~~   97 (174)
                      +|.....+|.+.+.||+|+||.||.+...        ....+|+|.++... ......+.+|+.++.++ +  |+||+++
T Consensus         6 ~~~~~~~~~~i~~~ig~G~~g~v~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~~--h~~iv~~   83 (334)
T cd05100           6 KWELSRTRLTLGKPLGEGCFGQVVMAEAIGIDKDKPNKPVTVAVKMLKDDATDKDLSDLVSEMEMMKMIGK--HKNIINL   83 (334)
T ss_pred             ccccCHhHeeecceeccccCCcEEEEEEeccCCccCCcceeEEEEEcccccCHHHHHHHHHHHHHHHhhcC--CCCeeee
Confidence            44455567899999999999999999731        12368999887542 23456788999999998 6  9999999


Q ss_pred             ecceecCCCcccchhhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhcc
Q 039630           98 HGGCIDGPSRILAPLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEI  170 (174)
Q Consensus        98 ~~~~~~~~~~~lv~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  170 (174)
                      ++.+...+..++++  ++...+.+...+........-............+++..++.++.|++.||+|||++.
T Consensus        84 ~~~~~~~~~~~lv~--e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~g  154 (334)
T cd05100          84 LGACTQDGPLYVLV--EYASKGNLREYLRARRPPGMDYSFDTCKLPEEQLTFKDLVSCAYQVARGMEYLASQK  154 (334)
T ss_pred             eEEEccCCceEEEE--ecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            99999888888888  777777766554432111100000000112335788889999999999999999754

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4

Probab=99.54  E-value=1.3e-13  Score=99.38  Aligned_cols=117  Identities=21%  Similarity=0.237  Sum_probs=92.3

Q ss_pred             CCeeecceecccCCeeEEEEEE-cCCCEEEEEEeeccC--ccchhHHHHHHHHHhcccccCCCeeeeecceecCCCcccc
Q 039630           34 NGFRTSNKIGEGGFGSVYKGRL-EDGTVVAVNVLSVES--KQGETEFMSEVASMANINICHENLVKLHGGCIDGPSRILA  110 (174)
Q Consensus        34 ~~~~~~~~lg~G~~g~V~~~~~-~~~~~~avK~~~~~~--~~~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~~~~~~~lv  110 (174)
                      ++|+....||+|+||.||++.. .+++.+++|.+....  ......+.+|+.+++.++  |+|++++++.+...+..+++
T Consensus         1 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~--h~~i~~~~~~~~~~~~~~~v   78 (286)
T cd07847           1 EKYEKLSKIGEGSYGVVFKCRNRETGQIVAIKKFVESEDDPVIKKIALREIRMLKQLK--HPNLVNLIEVFRRKRKLHLV   78 (286)
T ss_pred             CceeeeeeecccCCeEEEEEEECCCCcEEEEEEEeecccCccccHHHHHHHHHHHhCC--CCCEeeeeeEEeeCCEEEEE
Confidence            3588889999999999999984 468899999986542  223456788999999999  99999999999988888888


Q ss_pred             hhhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhcc
Q 039630          111 PLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEI  170 (174)
Q Consensus       111 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  170 (174)
                      +  ++.+...+....                .....+++..+..++.|++.||+|||++.
T Consensus        79 ~--e~~~~~~l~~~~----------------~~~~~~~~~~~~~~~~ql~~~l~~LH~~~  120 (286)
T cd07847          79 F--EYCDHTVLNELE----------------KNPRGVPEHLIKKIIWQTLQAVNFCHKHN  120 (286)
T ss_pred             E--eccCccHHHHHH----------------hCCCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            8  666655443311                11224788999999999999999999853

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio

>cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor

Probab=99.54  E-value=6.6e-14  Score=101.31  Aligned_cols=132  Identities=21%  Similarity=0.317  Sum_probs=95.6

Q ss_pred             HHhhcCCeeecceecccCCeeEEEEEEc------CCCEEEEEEeeccC-ccchhHHHHHHHHHhcccccCCCeeeeecce
Q 039630           29 LKIATNGFRTSNKIGEGGFGSVYKGRLE------DGTVVAVNVLSVES-KQGETEFMSEVASMANINICHENLVKLHGGC  101 (174)
Q Consensus        29 ~~~~~~~~~~~~~lg~G~~g~V~~~~~~------~~~~~avK~~~~~~-~~~~~~~~~e~~~l~~l~~~h~~i~~~~~~~  101 (174)
                      |.....+|.+.+.||+|+||.||+|...      .+..+|+|.++... ......+.+|+.+++.++  |+|++++++.+
T Consensus         1 ~~~~~~~~~i~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~--~~~i~~~~~~~   78 (288)
T cd05061           1 WEVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFT--CHHVVRLLGVV   78 (288)
T ss_pred             CcccHHHceeeeeecCCCCcEEEEEEEeccCCCCcceEEEEEECCCcCCHHHHHHHHHHHHHHHhCC--CCCeeeEEEEE
Confidence            3445677999999999999999998732      24589999886442 223445788999999999  99999999999


Q ss_pred             ecCCCcccchhhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhcc
Q 039630          102 IDGPSRILAPLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEI  170 (174)
Q Consensus       102 ~~~~~~~lv~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  170 (174)
                      ...+..++++  ++..++.|...+........      .........+..+..++.|++.||.|||++.
T Consensus        79 ~~~~~~~lv~--e~~~~g~L~~~l~~~~~~~~------~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~  139 (288)
T cd05061          79 SKGQPTLVVM--ELMAHGDLKSYLRSLRPEAE------NNPGRPPPTLQEMIQMAAEIADGMAYLNAKK  139 (288)
T ss_pred             cCCCCcEEEE--eCCCCCCHHHHHHHhccccc------cCCCCCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            8888888888  77776766654432211000      0011123467778889999999999999864

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta

>cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk

Probab=99.54  E-value=7.6e-14  Score=99.45  Aligned_cols=120  Identities=23%  Similarity=0.329  Sum_probs=92.6

Q ss_pred             hhcCCeeecceecccCCeeEEEEEEcCCCEEEEEEeeccCccchhHHHHHHHHHhcccccCCCeeeeecceecCCCcccc
Q 039630           31 IATNGFRTSNKIGEGGFGSVYKGRLEDGTVVAVNVLSVESKQGETEFMSEVASMANINICHENLVKLHGGCIDGPSRILA  110 (174)
Q Consensus        31 ~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~avK~~~~~~~~~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~~~~~~~lv  110 (174)
                      ...++|++.+.||+|+||.||++...++..+++|.++... .....+.+|+.++++++  |+|++++++.+. .+..+++
T Consensus         3 ~~~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~k~~~~~~-~~~~~~~~E~~~l~~l~--~~~i~~~~~~~~-~~~~~lv   78 (260)
T cd05070           3 IPRESLQLIKKLGNGQFGEVWMGTWNGNTKVAVKTLKPGT-MSPESFLEEAQIMKKLR--HDKLVQLYAVVS-EEPIYIV   78 (260)
T ss_pred             CchHHhhhhheeccccCceEEEEEecCCceeEEEEecCCC-CCHHHHHHHHHHHHhcC--CCceEEEEeEEC-CCCcEEE
Confidence            3445788889999999999999987777889999987542 23457889999999999  999999998874 4556677


Q ss_pred             hhhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhcc
Q 039630          111 PLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEI  170 (174)
Q Consensus       111 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  170 (174)
                      +  ++.+.+.+...+..              .....+++..+..++.|++.||.|||++.
T Consensus        79 ~--e~~~~~~L~~~~~~--------------~~~~~~~~~~~~~~~~~l~~al~~lH~~~  122 (260)
T cd05070          79 T--EYMSKGSLLDFLKD--------------GEGRALKLPNLVDMAAQVAAGMAYIERMN  122 (260)
T ss_pred             E--EecCCCcHHHHHHh--------------cCCCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            6  66666655543211              11234788889999999999999999864

Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r

>cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon

Probab=99.54  E-value=5.5e-14  Score=103.32  Aligned_cols=112  Identities=21%  Similarity=0.201  Sum_probs=87.3

Q ss_pred             ceecccCCeeEEEEE-EcCCCEEEEEEeeccC---ccchhHHHHHHHHHhcccccCCCeeeeecceecCCCcccchhhhh
Q 039630           40 NKIGEGGFGSVYKGR-LEDGTVVAVNVLSVES---KQGETEFMSEVASMANINICHENLVKLHGGCIDGPSRILAPLQAS  115 (174)
Q Consensus        40 ~~lg~G~~g~V~~~~-~~~~~~~avK~~~~~~---~~~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~~~~~~~lv~~~~~  115 (174)
                      +.||+|+||.||+|. ..++..+|+|+++...   ......+..|..++..+. .|+||+++++.+...+..++++  ++
T Consensus         1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~-~hp~i~~~~~~~~~~~~~~lv~--E~   77 (321)
T cd05591           1 KVLGKGSFGKVMLAELKGTDEVYAIKVLKKDVILQDDDVDCTMTEKRILALAA-KHPFLTALHCCFQTKDRLFFVM--EY   77 (321)
T ss_pred             CccccCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhcc-CCCCccceeeEEEcCCeEEEEE--eC
Confidence            368999999999998 4568899999997542   233455677888887653 3999999999999998888888  77


Q ss_pred             hhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhcc
Q 039630          116 IEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEI  170 (174)
Q Consensus       116 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  170 (174)
                      .+++.+...+.                ....+++..+..++.|++.||.|||++.
T Consensus        78 ~~~~~L~~~l~----------------~~~~~~~~~~~~~~~qi~~aL~~LH~~~  116 (321)
T cd05591          78 VNGGDLMFQIQ----------------RSRKFDEPRSRFYAAEVTLALMFLHRHG  116 (321)
T ss_pred             CCCCcHHHHHH----------------HcCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            77776654331                1224788888899999999999999863

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to

>cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2

Probab=99.53  E-value=6.8e-14  Score=103.24  Aligned_cols=117  Identities=21%  Similarity=0.234  Sum_probs=92.1

Q ss_pred             CeeecceecccCCeeEEEEEE----cCCCEEEEEEeeccC----ccchhHHHHHHHHHhcccccCCCeeeeecceecCCC
Q 039630           35 GFRTSNKIGEGGFGSVYKGRL----EDGTVVAVNVLSVES----KQGETEFMSEVASMANINICHENLVKLHGGCIDGPS  106 (174)
Q Consensus        35 ~~~~~~~lg~G~~g~V~~~~~----~~~~~~avK~~~~~~----~~~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~~~~~  106 (174)
                      +|++.+.||+|+||.||++..    .++..+|+|+++...    ......+..|+.++..+. .|++|+++++.+...+.
T Consensus         1 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~-~~~~i~~~~~~~~~~~~   79 (332)
T cd05614           1 NFELLKVLGTGAYGKVFLVRKVTGHDTGKLYAMKVLQKAALVQKAKTVEHTRTERNVLEHVR-QSPFLVTLHYAFQTEAK   79 (332)
T ss_pred             CceEEEEEeecCCEEEEEEEEcccCCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHHhcc-CCCCcccEEEEEecCCE
Confidence            478889999999999999873    357899999997431    223456778999999884 48999999999988888


Q ss_pred             cccchhhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhcc
Q 039630          107 RILAPLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEI  170 (174)
Q Consensus       107 ~~lv~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  170 (174)
                      .++++  ++..++.+...+.                ....+++..+..++.|++.||+|||++.
T Consensus        80 ~~lv~--e~~~~g~L~~~l~----------------~~~~~~~~~~~~~~~qi~~~l~~lH~~~  125 (332)
T cd05614          80 LHLIL--DYVSGGEMFTHLY----------------QRDNFSEDEVRFYSGEIILALEHLHKLG  125 (332)
T ss_pred             EEEEE--eCCCCCcHHHHHH----------------HcCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            88888  7777777665442                1234788888999999999999999864

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph

>cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4

Probab=99.53  E-value=9.8e-14  Score=99.10  Aligned_cols=116  Identities=20%  Similarity=0.344  Sum_probs=92.3

Q ss_pred             CeeecceecccCCeeEEEEEEcCCCEEEEEEeeccCc------cchhHHHHHHHHHhcccccCCCeeeeecceecCCCcc
Q 039630           35 GFRTSNKIGEGGFGSVYKGRLEDGTVVAVNVLSVESK------QGETEFMSEVASMANINICHENLVKLHGGCIDGPSRI  108 (174)
Q Consensus        35 ~~~~~~~lg~G~~g~V~~~~~~~~~~~avK~~~~~~~------~~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~~~~~~~  108 (174)
                      +|+..+.||.|+||.||++...++..+|+|.++....      .....+.+|+.+++.++  |+|++++.+.+...+..+
T Consensus         1 ~~~~~~~ig~g~~~~v~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~--~~~i~~~~~~~~~~~~~~   78 (265)
T cd06631           1 EWTKGEVLGKGAYGTVYCGLTNQGQLIAVKQVELDTSNVLAAEKEYEKLQEEVDLLKSLK--HVNIVQYLGTCLDDNTIS   78 (265)
T ss_pred             CccccceEeccCCeEEEEEEEcCCCeEEEEEeecCccchhhHHHHHHHHHHHHHHHHhcC--CCCEeeEeeEeecCCeEE
Confidence            3667789999999999999877888999999875421      12345888999999999  999999999999888888


Q ss_pred             cchhhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhcc
Q 039630          109 LAPLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEI  170 (174)
Q Consensus       109 lv~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  170 (174)
                      +++  ++..++.+...+.                ....+++..+..++.|++.||+|||+..
T Consensus        79 lv~--e~~~~~~L~~~l~----------------~~~~~~~~~~~~~~~qi~~~l~~lH~~~  122 (265)
T cd06631          79 IFM--EFVPGGSISSILN----------------RFGPLPEPVFCKYTKQILDGVAYLHNNC  122 (265)
T ss_pred             EEE--ecCCCCcHHHHHH----------------hcCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            888  6666666654331                1124678888899999999999999854

Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals.

>cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3

Probab=99.53  E-value=5.5e-14  Score=101.42  Aligned_cols=116  Identities=23%  Similarity=0.279  Sum_probs=92.0

Q ss_pred             CeeecceecccCCeeEEEEEE-cCCCEEEEEEeeccC--ccchhHHHHHHHHHhcccccCCCeeeeecceecCCCcccch
Q 039630           35 GFRTSNKIGEGGFGSVYKGRL-EDGTVVAVNVLSVES--KQGETEFMSEVASMANINICHENLVKLHGGCIDGPSRILAP  111 (174)
Q Consensus        35 ~~~~~~~lg~G~~g~V~~~~~-~~~~~~avK~~~~~~--~~~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~~~~~~~lv~  111 (174)
                      +|+..+.||+|+||.||++.. .+++.+|+|.+....  ......+.+|+.++..++  |+|++++++.+...+..++++
T Consensus         2 ~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~--h~~i~~~~~~~~~~~~~~lv~   79 (286)
T cd07846           2 KYENLGLVGEGSYGMVMKCKHKETGQIVAIKKFLESEDDKMVKKIAMREIRMLKQLR--HENLVNLIEVFRRKKRLYLVF   79 (286)
T ss_pred             ceeEeeeeccCCCeEEEEEEECCCCCEEEEEeHhhccCcchhhHHHHHHHHHHHhcC--CcchhhHHHhcccCCeEEEEE
Confidence            588889999999999999995 468899999986542  223456788999999999  999999999999888888888


Q ss_pred             hhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhcc
Q 039630          112 LQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEI  170 (174)
Q Consensus       112 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  170 (174)
                        ++.+...+....                .....+++..+..++.|++.||+|||++.
T Consensus        80 --e~~~~~~l~~~~----------------~~~~~~~~~~~~~~~~~i~~~l~~LH~~~  120 (286)
T cd07846          80 --EFVDHTVLDDLE----------------KYPNGLDESRVRKYLFQILRGIEFCHSHN  120 (286)
T ss_pred             --ecCCccHHHHHH----------------hccCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence              666655443311                11123788999999999999999999864

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI

>cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota

Probab=99.53  E-value=5.9e-14  Score=103.54  Aligned_cols=112  Identities=20%  Similarity=0.179  Sum_probs=87.7

Q ss_pred             ceecccCCeeEEEEE-EcCCCEEEEEEeeccC---ccchhHHHHHHHHHhcccccCCCeeeeecceecCCCcccchhhhh
Q 039630           40 NKIGEGGFGSVYKGR-LEDGTVVAVNVLSVES---KQGETEFMSEVASMANINICHENLVKLHGGCIDGPSRILAPLQAS  115 (174)
Q Consensus        40 ~~lg~G~~g~V~~~~-~~~~~~~avK~~~~~~---~~~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~~~~~~~lv~~~~~  115 (174)
                      +.||+|+||.||++. ..+++.+|+|+++...   ......+..|+.++.++. .|+||+++++++...+..++++  ++
T Consensus         1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~-~hp~iv~~~~~~~~~~~~~lv~--E~   77 (329)
T cd05618           1 RVIGRGSYAKVLLVRLKKTERIYAMKVVKKELVNDDEDIDWVQTEKHVFEQAS-NHPFLVGLHSCFQTESRLFFVI--EY   77 (329)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEhhHhcchhHHHHHHHHHHHHHhcC-CCCcCCceeeEEEeCCEEEEEE--eC
Confidence            468999999999999 5568899999998542   233455778888887662 3999999999999998888888  77


Q ss_pred             hhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhcc
Q 039630          116 IEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEI  170 (174)
Q Consensus       116 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  170 (174)
                      .+++.+...+.                ....+++..+..++.|++.||.|||++.
T Consensus        78 ~~~~~L~~~~~----------------~~~~l~~~~~~~i~~qi~~~l~~lH~~~  116 (329)
T cd05618          78 VNGGDLMFHMQ----------------RQRKLPEEHARFYSAEISLALNYLHERG  116 (329)
T ss_pred             CCCCCHHHHHH----------------HcCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            77776654331                1234788899999999999999999864

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o

>KOG0033 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]

Probab=99.53  E-value=1.9e-16  Score=108.80  Aligned_cols=117  Identities=19%  Similarity=0.273  Sum_probs=100.1

Q ss_pred             CCeeecceecccCCeeEEEEE-EcCCCEEEEEEeecc--CccchhHHHHHHHHHhcccccCCCeeeeecceecCCCcccc
Q 039630           34 NGFRTSNKIGEGGFGSVYKGR-LEDGTVVAVNVLSVE--SKQGETEFMSEVASMANINICHENLVKLHGGCIDGPSRILA  110 (174)
Q Consensus        34 ~~~~~~~~lg~G~~g~V~~~~-~~~~~~~avK~~~~~--~~~~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~~~~~~~lv  110 (174)
                      +.|.+.++||+|+|+.|+++. .++|+.+|+|++...  .....+.+.+|+.|.+.++  ||||+++.+........++|
T Consensus        11 d~y~l~e~igkG~FSvVrRc~~~~tg~~fa~kiin~~k~~~~~~e~l~rEarIC~~Lq--HP~IvrL~~ti~~~~~~ylv   88 (355)
T KOG0033|consen   11 DNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQ--HPNIVRLHDSIQEESFHYLV   88 (355)
T ss_pred             hhhhHHHHHccCchHHHHHHHhccchHHHHHHHhhhhhhccccHHHHHHHHHHHHhcC--CCcEeehhhhhcccceeEEE
Confidence            457778999999999999988 778999999999655  3446778999999999999  99999999999999999999


Q ss_pred             hhhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhcc
Q 039630          111 PLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEI  170 (174)
Q Consensus       111 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  170 (174)
                      +  +.++++.+..+.-                .+...++...-.++.||+++|.|.|++.
T Consensus        89 F--e~m~G~dl~~eIV----------------~R~~ySEa~aSH~~rQiLeal~yCH~n~  130 (355)
T KOG0033|consen   89 F--DLVTGGELFEDIV----------------AREFYSEADASHCIQQILEALAYCHSNG  130 (355)
T ss_pred             E--ecccchHHHHHHH----------------HHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence            9  8889888887652                2244688888999999999999999863

>cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta

Probab=99.53  E-value=7e-14  Score=102.77  Aligned_cols=112  Identities=21%  Similarity=0.242  Sum_probs=87.8

Q ss_pred             ceecccCCeeEEEEE-EcCCCEEEEEEeecc---CccchhHHHHHHHHHhcccccCCCeeeeecceecCCCcccchhhhh
Q 039630           40 NKIGEGGFGSVYKGR-LEDGTVVAVNVLSVE---SKQGETEFMSEVASMANINICHENLVKLHGGCIDGPSRILAPLQAS  115 (174)
Q Consensus        40 ~~lg~G~~g~V~~~~-~~~~~~~avK~~~~~---~~~~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~~~~~~~lv~~~~~  115 (174)
                      +.||+|+||.||++. ..++..+|+|+++..   .......+..|..++..+. .|+||+++++++...+..++++  ++
T Consensus         1 ~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~-~h~~iv~~~~~~~~~~~~~iv~--Ey   77 (320)
T cd05590           1 RVLGKGSFGKVMLARLKESGRLYAVKVLKKDVILQDDDVECTMTEKRILSLAR-NHPFLTQLYCCFQTPDRLFFVM--EF   77 (320)
T ss_pred             CeeeeCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhcc-CCCchhceeeEEEcCCEEEEEE--cC
Confidence            368999999999998 456889999999754   2234456677888887653 3999999999999998888888  77


Q ss_pred             hhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhcc
Q 039630          116 IEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEI  170 (174)
Q Consensus       116 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  170 (174)
                      .+++.+...+.                ....+++..+..++.|++.||+|||++.
T Consensus        78 ~~~g~L~~~i~----------------~~~~l~~~~~~~~~~ql~~~L~~lH~~~  116 (320)
T cd05590          78 VNGGDLMFHIQ----------------KSRRFDEARARFYAAEITSALMFLHDKG  116 (320)
T ss_pred             CCCchHHHHHH----------------HcCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            77777765331                1234788888999999999999999864

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal

>cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors

Probab=99.53  E-value=5.7e-14  Score=101.22  Aligned_cols=133  Identities=26%  Similarity=0.386  Sum_probs=95.4

Q ss_pred             CCeeecceecccCCeeEEEEEEcC------CCEEEEEEeeccC-ccchhHHHHHHHHHhcccccCCCeeeeecceecCCC
Q 039630           34 NGFRTSNKIGEGGFGSVYKGRLED------GTVVAVNVLSVES-KQGETEFMSEVASMANINICHENLVKLHGGCIDGPS  106 (174)
Q Consensus        34 ~~~~~~~~lg~G~~g~V~~~~~~~------~~~~avK~~~~~~-~~~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~~~~~  106 (174)
                      ++|+..+.||+|+||.||++....      ...+++|.++... ......+.+|+.++..++  |+|++++++.+.....
T Consensus         5 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~v~~K~~~~~~~~~~~~~~~~ei~~l~~l~--h~~i~~~~~~~~~~~~   82 (283)
T cd05048           5 SAVRFLEELGEGAFGKVYKGELTGPNERLSATSVAIKTLKENAEPKVQQEFRQEAELMSDLQ--HPNIVCLLGVCTKEQP   82 (283)
T ss_pred             HHcchhhcccCccCCcEEEEEEecCCCCcceeeEEEEecccCCCHHHHHHHHHHHHHHHhcC--CcccceEEEEEcCCCc
Confidence            467788999999999999998422      2578999987442 233456889999999999  9999999999988888


Q ss_pred             cccchhhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhcc
Q 039630          107 RILAPLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEI  170 (174)
Q Consensus       107 ~~lv~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  170 (174)
                      .++++  ++.+++.+...+.....................+++..+..++.|++.||.|||++.
T Consensus        83 ~~~~~--e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~al~~lH~~~  144 (283)
T cd05048          83 TCMLF--EYLAHGDLHEFLVRNSPHSDVGAESGDETVKSSLDCSDFLHIAIQIAAGMEYLSSHH  144 (283)
T ss_pred             eEEEE--ecCCCCcHHHHHHhcCCCcccccccccccccCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            88888  777666665544332211111111111111245788889999999999999999864

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer

>cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta

Probab=99.53  E-value=7e-14  Score=103.04  Aligned_cols=112  Identities=20%  Similarity=0.179  Sum_probs=88.9

Q ss_pred             ceecccCCeeEEEEE-EcCCCEEEEEEeeccC---ccchhHHHHHHHHHhcccccCCCeeeeecceecCCCcccchhhhh
Q 039630           40 NKIGEGGFGSVYKGR-LEDGTVVAVNVLSVES---KQGETEFMSEVASMANINICHENLVKLHGGCIDGPSRILAPLQAS  115 (174)
Q Consensus        40 ~~lg~G~~g~V~~~~-~~~~~~~avK~~~~~~---~~~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~~~~~~~lv~~~~~  115 (174)
                      +.||+|+||.||++. ..++..+|+|+++...   ......+..|+.++.++. .|++|+.+++++...+..++++  ++
T Consensus         1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~~~-~~~~i~~~~~~~~~~~~~~lv~--e~   77 (327)
T cd05617           1 RVIGRGSYAKVLLVRLKKNDQIYAMKVVKKELVHDDEDIDWVQTEKHVFEQAS-SNPFLVGLHSCFQTTSRLFLVI--EY   77 (327)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhhc-CCCCEeeEEEEEEeCCEEEEEE--eC
Confidence            469999999999998 4568899999998542   233456788888888874 4999999999999888888888  77


Q ss_pred             hhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhcc
Q 039630          116 IEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEI  170 (174)
Q Consensus       116 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  170 (174)
                      .+++.+...+.                ....+++..+..++.|++.||+|||++.
T Consensus        78 ~~~~~L~~~~~----------------~~~~l~~~~~~~~~~qi~~al~~lH~~~  116 (327)
T cd05617          78 VNGGDLMFHMQ----------------RQRKLPEEHARFYAAEICIALNFLHERG  116 (327)
T ss_pred             CCCCcHHHHHH----------------HcCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            77776654331                1234788999999999999999999864

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways

>cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src

Probab=99.53  E-value=8.2e-14  Score=99.50  Aligned_cols=120  Identities=24%  Similarity=0.322  Sum_probs=91.5

Q ss_pred             hhcCCeeecceecccCCeeEEEEEEcCCCEEEEEEeeccCccchhHHHHHHHHHhcccccCCCeeeeecceecCCCcccc
Q 039630           31 IATNGFRTSNKIGEGGFGSVYKGRLEDGTVVAVNVLSVESKQGETEFMSEVASMANINICHENLVKLHGGCIDGPSRILA  110 (174)
Q Consensus        31 ~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~avK~~~~~~~~~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~~~~~~~lv  110 (174)
                      ...++|++.+.||+|+||.||++...+...+++|.++... .....+.+|+.+++.++  |+|++++++.+. .+..+++
T Consensus         3 ~~~~~~~~~~~lg~g~~~~v~~~~~~~~~~valK~~~~~~-~~~~~~~~E~~~l~~l~--~~~i~~~~~~~~-~~~~~lv   78 (262)
T cd05071           3 IPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLR--HEKLVQLYAVVS-EEPIYIV   78 (262)
T ss_pred             CChHHeeEeeecCCCCCCcEEEEEecCCceEEEEecccCc-cCHHHHHHHHHHHHhCC--CCCcceEEEEEC-CCCcEEE
Confidence            3456799999999999999999986666679999997542 23457889999999999  999999998764 3456666


Q ss_pred             hhhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhcc
Q 039630          111 PLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEI  170 (174)
Q Consensus       111 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  170 (174)
                      +  ++.+.+.+...+..              .....+++..+..++.|++.||+|||+..
T Consensus        79 ~--e~~~~~~L~~~~~~--------------~~~~~~~~~~~~~~~~~l~~aL~~lH~~~  122 (262)
T cd05071          79 T--EYMSKGSLLDFLKG--------------EMGKYLRLPQLVDMAAQIASGMAYVERMN  122 (262)
T ss_pred             E--EcCCCCcHHHHHhh--------------ccccCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            6  66666665543311              11124678888999999999999999864

Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo

>cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase

Probab=99.53  E-value=9e-14  Score=99.11  Aligned_cols=121  Identities=23%  Similarity=0.336  Sum_probs=93.7

Q ss_pred             HhhcCCeeecceecccCCeeEEEEEEcCCCEEEEEEeeccCccchhHHHHHHHHHhcccccCCCeeeeecceecCCCccc
Q 039630           30 KIATNGFRTSNKIGEGGFGSVYKGRLEDGTVVAVNVLSVESKQGETEFMSEVASMANINICHENLVKLHGGCIDGPSRIL  109 (174)
Q Consensus        30 ~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~avK~~~~~~~~~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~~~~~~~l  109 (174)
                      .+...+|.+.+.||+|+||.||++....+..+++|.++.. ......+.+|+.+++.++  |+|++++.+.+.. ...++
T Consensus         2 ~~~~~~~~~~~~lg~g~~~~vy~~~~~~~~~~~iK~~~~~-~~~~~~~~~e~~~l~~l~--~~~i~~~~~~~~~-~~~~~   77 (260)
T cd05073           2 EIPRESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPG-SMSVEAFLAEANVMKTLQ--HDKLVKLHAVVTK-EPIYI   77 (260)
T ss_pred             cccccceeEEeEecCccceEEEEEEecCCccEEEEecCCC-hhHHHHHHHHHHHHHhcC--CCCcceEEEEEcC-CCeEE
Confidence            3456789999999999999999998766778999988643 234567889999999999  9999999998876 56667


Q ss_pred             chhhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhcc
Q 039630          110 APLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEI  170 (174)
Q Consensus       110 v~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  170 (174)
                      ++  ++.+++.+...+..              .....+++..+..++.|++.||.|||++.
T Consensus        78 v~--e~~~~~~L~~~~~~--------------~~~~~~~~~~~~~~~~~l~~aL~~lH~~~  122 (260)
T cd05073          78 IT--EFMAKGSLLDFLKS--------------DEGSKQPLPKLIDFSAQIAEGMAFIEQRN  122 (260)
T ss_pred             EE--EeCCCCcHHHHHHh--------------CCccccCHHHHHHHHHHHHHHHHHHHhCC
Confidence            76  66666665543311              11224678888899999999999999854

Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa

>cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta

Probab=99.53  E-value=7.4e-14  Score=102.48  Aligned_cols=112  Identities=19%  Similarity=0.177  Sum_probs=84.9

Q ss_pred             ceecccCCeeEEEEE-EcCCCEEEEEEeeccC---ccchhHHHHHHHHHhcccccCCCeeeeecceecCCCcccchhhhh
Q 039630           40 NKIGEGGFGSVYKGR-LEDGTVVAVNVLSVES---KQGETEFMSEVASMANINICHENLVKLHGGCIDGPSRILAPLQAS  115 (174)
Q Consensus        40 ~~lg~G~~g~V~~~~-~~~~~~~avK~~~~~~---~~~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~~~~~~~lv~~~~~  115 (174)
                      +.||+|+||.||++. ..++..||+|+++...   .........|..++.... .|+||+++++.+...+..++++  ++
T Consensus         1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~-~hp~i~~~~~~~~~~~~~~lv~--e~   77 (316)
T cd05592           1 KVLGKGSFGKVMLAELKGTNEFFAIKALKKDVVLEDDDVECTMVERRVLALAW-EHPFLTHLFCTFQTKEHLFFVM--EY   77 (316)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhcc-CCCCccceeeEEEcCCEEEEEE--cC
Confidence            368999999999999 4568899999997542   223444566666666542 3999999999999888888888  77


Q ss_pred             hhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhcc
Q 039630          116 IEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEI  170 (174)
Q Consensus       116 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  170 (174)
                      .+++.+...+.                ....+++..+..++.|++.||.|||++.
T Consensus        78 ~~gg~L~~~~~----------------~~~~~~~~~~~~~~~qi~~al~~LH~~~  116 (316)
T cd05592          78 LNGGDLMFHIQ----------------SSGRFDEARARFYAAEIICGLQFLHKKG  116 (316)
T ss_pred             CCCCcHHHHHH----------------HcCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            77776654331                1224788888899999999999999864

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp

>cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7

Probab=99.53  E-value=1e-13  Score=100.63  Aligned_cols=115  Identities=21%  Similarity=0.317  Sum_probs=90.4

Q ss_pred             eeecceecccCCeeEEEEE-EcCCCEEEEEEeeccCcc-----chhHHHHHHHHHhcccccCCCeeeeecceecCCCccc
Q 039630           36 FRTSNKIGEGGFGSVYKGR-LEDGTVVAVNVLSVESKQ-----GETEFMSEVASMANINICHENLVKLHGGCIDGPSRIL  109 (174)
Q Consensus        36 ~~~~~~lg~G~~g~V~~~~-~~~~~~~avK~~~~~~~~-----~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~~~~~~~l  109 (174)
                      |...+.||+|+||.||+|. ..++..+++|.++.....     ....+..|+.+++.++  |+|++++++.+...+..++
T Consensus         2 y~~~~~lg~g~~~~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~e~~~l~~~~--h~~i~~~~~~~~~~~~~~l   79 (298)
T cd07841           2 YEKGKKLGEGTYAVVYKARDKETGRIVAIKKIKLGERKEAKDGINFTALREIKLLQELK--HPNIIGLLDVFGHKSNINL   79 (298)
T ss_pred             ceeeeeeeeccccEEEEEEECCCCcEEEEEEEeccccccccchhhHHHHHHHHHHhhcC--CCCChhhhheeecCCEEEE
Confidence            6777899999999999999 456889999999755322     2345678999999999  9999999999999888888


Q ss_pred             chhhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhcc
Q 039630          110 APLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEI  170 (174)
Q Consensus       110 v~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  170 (174)
                      ++  ++. .+.+...+.               .....+++..+..++.|++.||+|||++.
T Consensus        80 v~--e~~-~~~L~~~i~---------------~~~~~~~~~~~~~~~~qi~~al~~lH~~~  122 (298)
T cd07841          80 VF--EFM-ETDLEKVIK---------------DKSIVLTPADIKSYMLMTLRGLEYLHSNW  122 (298)
T ss_pred             EE--ccc-CCCHHHHHh---------------ccCCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            88  555 444444221               11124788999999999999999999864

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is

>cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase

Probab=99.53  E-value=1.2e-13  Score=99.60  Aligned_cols=116  Identities=21%  Similarity=0.296  Sum_probs=93.1

Q ss_pred             CeeecceecccCCeeEEEEE-EcCCCEEEEEEeeccC--ccchhHHHHHHHHHhcccccCCCeeeeecceecCCCcccch
Q 039630           35 GFRTSNKIGEGGFGSVYKGR-LEDGTVVAVNVLSVES--KQGETEFMSEVASMANINICHENLVKLHGGCIDGPSRILAP  111 (174)
Q Consensus        35 ~~~~~~~lg~G~~g~V~~~~-~~~~~~~avK~~~~~~--~~~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~~~~~~~lv~  111 (174)
                      +|++.+.||+|+||.||++. ..++..+++|++....  ......+.+|+.+++.++  |+|++++++.+...+..++++
T Consensus         1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~e~~~l~~~~--~~~i~~~~~~~~~~~~~~~v~   78 (286)
T cd07832           1 RYKILGRIGEGAHGIVFKAKDRETGETVALKKVALRRLEGGIPNQALREIKALQACQ--HPYVVKLLDVFPHGSGFVLVM   78 (286)
T ss_pred             CceEEeecccCCCcEEEEEEECCCCceEEEEEEEcccccchhhHHHHHHHHHHHhCC--CCCCcceeeEEecCCeeEEEe
Confidence            47788999999999999999 4578899999997653  334567889999999999  999999999999888888888


Q ss_pred             hhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhcc
Q 039630          112 LQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEI  170 (174)
Q Consensus       112 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  170 (174)
                        ++. ++.+...+.               .....+++..+..++.|++.||+|||+..
T Consensus        79 --e~~-~~~L~~~~~---------------~~~~~~~~~~~~~~~~~i~~~l~~lH~~~  119 (286)
T cd07832          79 --EYM-PSDLSEVLR---------------DEERPLPEAQVKSYMRMLLKGVAYMHANG  119 (286)
T ss_pred             --ccc-CCCHHHHHH---------------hcCCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence              655 555544221               11134788899999999999999999864

Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea

>cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3

Probab=99.53  E-value=1.2e-13  Score=99.52  Aligned_cols=117  Identities=24%  Similarity=0.317  Sum_probs=90.7

Q ss_pred             CeeecceecccCCeeEEEEE-EcCCCEEEEEEeeccC--ccchhHHHHHHHHHhcccccCCCeeeeecceecCCCcccch
Q 039630           35 GFRTSNKIGEGGFGSVYKGR-LEDGTVVAVNVLSVES--KQGETEFMSEVASMANINICHENLVKLHGGCIDGPSRILAP  111 (174)
Q Consensus        35 ~~~~~~~lg~G~~g~V~~~~-~~~~~~~avK~~~~~~--~~~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~~~~~~~lv~  111 (174)
                      +|+..+.||+|++|.||++. ..++..+++|.++...  ......+.+|+.++++++  |+|++++.+.+...+..++++
T Consensus         1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~--h~~i~~~~~~~~~~~~~~~v~   78 (284)
T cd07860           1 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN--HPNIVKLLDVIHTENKLYLVF   78 (284)
T ss_pred             CceeeeeecCCCceEEEEEEECCCCCEEEEEEccccccccccchHHHHHHHHHHhcC--CCCCcchhhhcccCCcEEEEe
Confidence            47788999999999999998 4568899999987542  233457889999999999  999999999999888888888


Q ss_pred             hhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhcc
Q 039630          112 LQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEI  170 (174)
Q Consensus       112 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  170 (174)
                        ++... .+...+.              ......+++..+..++.|++.||+|||+..
T Consensus        79 --e~~~~-~l~~~~~--------------~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~  120 (284)
T cd07860          79 --EFLHQ-DLKKFMD--------------ASPLSGIPLPLIKSYLFQLLQGLAFCHSHR  120 (284)
T ss_pred             --ecccc-CHHHHHH--------------hCCCCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence              54432 2322110              112235788899999999999999999864

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex

>cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase

Probab=99.53  E-value=5.4e-14  Score=101.40  Aligned_cols=116  Identities=22%  Similarity=0.320  Sum_probs=91.8

Q ss_pred             eeecceecccCCeeEEEEEE-cCCCEEEEEEeeccCccchhHHHHHHHHHhcccccCCCeeeeecceecCCCcccchhhh
Q 039630           36 FRTSNKIGEGGFGSVYKGRL-EDGTVVAVNVLSVESKQGETEFMSEVASMANINICHENLVKLHGGCIDGPSRILAPLQA  114 (174)
Q Consensus        36 ~~~~~~lg~G~~g~V~~~~~-~~~~~~avK~~~~~~~~~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~~~~~~~lv~~~~  114 (174)
                      |++.+.||+|+||.||++.. .++..+++|.+..........+.+|+.+++.++  |+|++++++.+...+..++++  +
T Consensus         7 ~~i~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~--h~~ii~~~~~~~~~~~~~~v~--e   82 (282)
T cd06643           7 WEIIGELGDGAFGKVYKAQNKETGVLAAAKVIDTKSEEELEDYMVEIDILASCD--HPNIVKLLDAFYYENNLWILI--E   82 (282)
T ss_pred             HHHHhhcccCCCeEEEEEEECCCCeEEEEEEeCCCCHHHHHHHHHHHHHHHHCC--CCCeeeEEEEEeeCCEEEEEE--E
Confidence            45668899999999999994 457788999987554455667888999999999  999999999999888888888  6


Q ss_pred             hhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhcc
Q 039630          115 SIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEI  170 (174)
Q Consensus       115 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  170 (174)
                      +..++.+...+.               .....+++..+..++.|++.||.|||+..
T Consensus        83 ~~~~~~l~~~~~---------------~~~~~l~~~~~~~~~~qi~~~L~~LH~~~  123 (282)
T cd06643          83 FCAGGAVDAVML---------------ELERPLTEPQIRVVCKQTLEALNYLHENK  123 (282)
T ss_pred             ecCCCcHHHHHH---------------hcCCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            666555543221               11235788899999999999999999854

Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration.

>KOG0201 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.53  E-value=9.9e-15  Score=107.17  Aligned_cols=119  Identities=20%  Similarity=0.336  Sum_probs=93.7

Q ss_pred             CCeeecceecccCCeeEEEEE-EcCCCEEEEEEeecc-CccchhHHHHHHHHHhcccccCCCeeeeecceecCCCcccch
Q 039630           34 NGFRTSNKIGEGGFGSVYKGR-LEDGTVVAVNVLSVE-SKQGETEFMSEVASMANINICHENLVKLHGGCIDGPSRILAP  111 (174)
Q Consensus        34 ~~~~~~~~lg~G~~g~V~~~~-~~~~~~~avK~~~~~-~~~~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~~~~~~~lv~  111 (174)
                      ..|...+.||+|+||.||+|. ..+++.||+|++... ..+....+.+|+.++.+++  ++||.++++.+..+..++++|
T Consensus        13 ~~~~~~~~IgrGsfG~Vyk~~d~~t~k~vAiKii~Le~~~deIediqqei~~Ls~~~--~~~it~yygsyl~g~~LwiiM   90 (467)
T KOG0201|consen   13 LLYTKLELIGRGSFGEVYKAIDNKTKKVVAIKIIDLEEAEDEIEDIQQEISVLSQCD--SPNITEYYGSYLKGTKLWIIM   90 (467)
T ss_pred             cccccchhccccccceeeeeeeccccceEEEEEechhhcchhhHHHHHHHHHHHhcC--cchHHhhhhheeecccHHHHH
Confidence            347777999999999999999 677899999999877 4556788999999999999  999999999998887765555


Q ss_pred             hhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhccCC
Q 039630          112 LQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEIKT  172 (174)
Q Consensus       112 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~~~  172 (174)
                        +++.++....          +.      .....+.+..+..+++++..|+.|||.+.+.
T Consensus        91 --ey~~gGsv~~----------lL------~~~~~~~E~~i~~ilre~l~~l~ylH~~~ki  133 (467)
T KOG0201|consen   91 --EYCGGGSVLD----------LL------KSGNILDEFEIAVILREVLKGLDYLHSEKKI  133 (467)
T ss_pred             --HHhcCcchhh----------hh------ccCCCCccceeeeehHHHHHHhhhhhhccee
Confidence              4444444443          22      1222346677777899999999999997664

>cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases

Probab=99.53  E-value=4.8e-14  Score=101.79  Aligned_cols=116  Identities=19%  Similarity=0.248  Sum_probs=94.1

Q ss_pred             CCeeecceecccCCeeEEEEE-EcCCCEEEEEEeeccC-ccchhHHHHHHHHHhcccccCCCeeeeecceecCCCcccch
Q 039630           34 NGFRTSNKIGEGGFGSVYKGR-LEDGTVVAVNVLSVES-KQGETEFMSEVASMANINICHENLVKLHGGCIDGPSRILAP  111 (174)
Q Consensus        34 ~~~~~~~~lg~G~~g~V~~~~-~~~~~~~avK~~~~~~-~~~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~~~~~~~lv~  111 (174)
                      ++|++.+.||+|+||.||++. ..++..+++|++.... ......+.+|+.++..++  |+|++++++.+...+..++++
T Consensus         5 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~--h~~i~~~~~~~~~~~~~~lv~   82 (284)
T cd06620           5 EDLETISDLGAGNGGSVSKVKHIPTGTVMAKKVVHIGAKSSVRKQILRELQIMHECR--SPYIVSFYGAFLNENNICMCM   82 (284)
T ss_pred             HHHHHHHHcCCCCCeEEEEEEEcCCCcEEEEEEEEecCcchHHHHHHHHHHHHHHcC--CCCcceEeeeEecCCEEEEEE
Confidence            568888999999999999998 5568899999987543 334567889999999999  999999999999998888888


Q ss_pred             hhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhc
Q 039630          112 LQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEE  169 (174)
Q Consensus       112 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~  169 (174)
                        ++.+++.+...+.                ....+++.....++.|++.||.|||+.
T Consensus        83 --e~~~~~~L~~~~~----------------~~~~~~~~~~~~~~~~i~~~l~~LH~~  122 (284)
T cd06620          83 --EFMDCGSLDRIYK----------------KGGPIPVEILGKIAVAVVEGLTYLYNV  122 (284)
T ss_pred             --ecCCCCCHHHHHH----------------hccCCCHHHHHHHHHHHHHHHHHHHHh
Confidence              7777666654321                122478888899999999999999963

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2

Probab=99.53  E-value=1e-13  Score=100.86  Aligned_cols=117  Identities=15%  Similarity=0.271  Sum_probs=96.5

Q ss_pred             cCCeeecceecccCCeeEEEEE-EcCCCEEEEEEeeccCccchhHHHHHHHHHhcccccCCCeeeeecceecCCCcccch
Q 039630           33 TNGFRTSNKIGEGGFGSVYKGR-LEDGTVVAVNVLSVESKQGETEFMSEVASMANINICHENLVKLHGGCIDGPSRILAP  111 (174)
Q Consensus        33 ~~~~~~~~~lg~G~~g~V~~~~-~~~~~~~avK~~~~~~~~~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~~~~~~~lv~  111 (174)
                      ..+|...+.||.|++|.||++. ..+++.+++|.+..........+.+|+.+++.++  |+|++++++.+...+..++++
T Consensus        18 ~~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~--h~~iv~~~~~~~~~~~~~lv~   95 (296)
T cd06655          18 KKKYTRYEKIGQGASGTVFTAIDVATGQEVAIKQINLQKQPKKELIINEILVMKELK--NPNIVNFLDSFLVGDELFVVM   95 (296)
T ss_pred             cceEEEEEEEecCCCeEEEEEEEcCCCcEEEEEEEecccCchHHHHHHHHHHHHhcC--CCceeeeeeeEecCceEEEEE
Confidence            3569999999999999999998 5678899999997665555677889999999999  999999999999888888888


Q ss_pred             hhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhcc
Q 039630          112 LQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEI  170 (174)
Q Consensus       112 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  170 (174)
                        ++..++.+.....                 ...+++..+..++.|++.|++|||++.
T Consensus        96 --e~~~~~~L~~~~~-----------------~~~l~~~~~~~i~~~l~~al~~LH~~~  135 (296)
T cd06655          96 --EYLAGGSLTDVVT-----------------ETCMDEAQIAAVCRECLQALEFLHANQ  135 (296)
T ss_pred             --EecCCCcHHHHHH-----------------hcCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence              6666666554221                 124788999999999999999999864

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7

Probab=99.52  E-value=2.9e-14  Score=101.88  Aligned_cols=121  Identities=21%  Similarity=0.313  Sum_probs=93.8

Q ss_pred             CCeeecceecccCCeeEEEEE-EcCCCEEEEEEeeccC---ccchhHHHHHHHHHhcccccCCCeeeeecceecCCCccc
Q 039630           34 NGFRTSNKIGEGGFGSVYKGR-LEDGTVVAVNVLSVES---KQGETEFMSEVASMANINICHENLVKLHGGCIDGPSRIL  109 (174)
Q Consensus        34 ~~~~~~~~lg~G~~g~V~~~~-~~~~~~~avK~~~~~~---~~~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~~~~~~~l  109 (174)
                      ++|.+.+.||+|+||.||++. ..++..+++|.+....   ......+.+|+.+++.++  |+|++++++.+...+..++
T Consensus         2 ~~y~~~~~ig~g~~g~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~~e~~~l~~~~--h~~i~~~~~~~~~~~~~~~   79 (267)
T cd08229           2 ANFRIEKKIGRGQFSEVYRATCLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLN--HPNVIKYYASFIEDNELNI   79 (267)
T ss_pred             chhhhhhhhcccCCeEEEEEeecCCCceEEEEeeeehhhhhHHHHHHHHHHHHHHHHcc--CCchhhhhheeEeCCeEEE
Confidence            357778999999999999999 5678999999886432   233457889999999999  9999999999998888888


Q ss_pred             chhhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhcc
Q 039630          110 APLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEI  170 (174)
Q Consensus       110 v~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  170 (174)
                      ++  ++.+++.+...+...            ......+++..+..++.|++.||.|||++.
T Consensus        80 v~--e~~~~~~L~~~~~~~------------~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~  126 (267)
T cd08229          80 VL--ELADAGDLSRMIKHF------------KKQKRLIPEKTVWKYFVQLCSALEHMHSRR  126 (267)
T ss_pred             EE--EecCCCCHHHHHHHh------------hccCCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            87  666655554422100            112235788999999999999999999864

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase.

>cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1

Probab=99.52  E-value=1.4e-13  Score=97.81  Aligned_cols=118  Identities=23%  Similarity=0.294  Sum_probs=93.6

Q ss_pred             CeeecceecccCCeeEEEEE-EcCCCEEEEEEeecc--CccchhHHHHHHHHHhcccccCCCeeeeecceecCCCcccch
Q 039630           35 GFRTSNKIGEGGFGSVYKGR-LEDGTVVAVNVLSVE--SKQGETEFMSEVASMANINICHENLVKLHGGCIDGPSRILAP  111 (174)
Q Consensus        35 ~~~~~~~lg~G~~g~V~~~~-~~~~~~~avK~~~~~--~~~~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~~~~~~~lv~  111 (174)
                      +|+..+.||+|+||.+|.+. ..+++.+++|.+...  .......+.+|+.+++.++  |+|++++.+.+...+..++++
T Consensus         1 ~y~~~~~lg~g~~g~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~--~~~i~~~~~~~~~~~~~~lv~   78 (256)
T cd08218           1 KYVKVKKIGEGSFGKAILVKSKEDGKQYVIKEINISKMSPKEREESRKEVAVLSNMK--HPNIVQYQESFEENGNLYIVM   78 (256)
T ss_pred             CceEEEEeccCCceEEEEEEEcCCCCEEEEEEEEhHhCChHHHHHHHHHHHHHHhCC--CCCeeeeEeeecCCCeEEEEE
Confidence            37788999999999999988 557889999998754  2334557889999999999  999999999999888888888


Q ss_pred             hhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhcc
Q 039630          112 LQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEI  170 (174)
Q Consensus       112 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  170 (174)
                        ++..++.+...+..              .....+++.....++.|++.||.|||++.
T Consensus        79 --e~~~~~~l~~~~~~--------------~~~~~~~~~~~~~~~~~l~~~l~~lh~~~  121 (256)
T cd08218          79 --DYCEGGDLYKKINA--------------QRGVLFPEDQILDWFVQICLALKHVHDRK  121 (256)
T ss_pred             --ecCCCCcHHHHHHh--------------ccCCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence              66666665543311              11124678888999999999999999864

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti

>cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C

Probab=99.52  E-value=7.2e-14  Score=102.59  Aligned_cols=112  Identities=22%  Similarity=0.236  Sum_probs=87.7

Q ss_pred             ceecccCCeeEEEEE-EcCCCEEEEEEeeccC---ccchhHHHHHHHHHhcccccCCCeeeeecceecCCCcccchhhhh
Q 039630           40 NKIGEGGFGSVYKGR-LEDGTVVAVNVLSVES---KQGETEFMSEVASMANINICHENLVKLHGGCIDGPSRILAPLQAS  115 (174)
Q Consensus        40 ~~lg~G~~g~V~~~~-~~~~~~~avK~~~~~~---~~~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~~~~~~~lv~~~~~  115 (174)
                      +.||+|+||.||++. ..++..+|+|+++...   ......+..|+.++..+. .|+||+++++.+...+..++++  ++
T Consensus         1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~-~h~~i~~~~~~~~~~~~~~lv~--e~   77 (318)
T cd05570           1 KVLGKGSFGKVLLAELKGTDELYAVKVLKKDVILQDDDVECTMTEKRVLALAG-KHPFLTQLHSCFQTKDRLFFVM--EY   77 (318)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhcc-CCCCccceeeEEEcCCEEEEEE--cC
Confidence            368999999999998 4567899999997542   233456678888888773 4999999999999988888888  77


Q ss_pred             hhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhcc
Q 039630          116 IEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEI  170 (174)
Q Consensus       116 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  170 (174)
                      ..++.+...+.                ....+++..+..++.|++.||.|||++.
T Consensus        78 ~~~~~L~~~~~----------------~~~~l~~~~~~~~~~qi~~~l~~LH~~~  116 (318)
T cd05570          78 VNGGDLMFHIQ----------------RSGRFDEPRARFYAAEIVLGLQFLHERG  116 (318)
T ss_pred             CCCCCHHHHHH----------------HcCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            76666654331                1224788999999999999999999853

Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re

>cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase

Probab=99.52  E-value=1.5e-13  Score=97.58  Aligned_cols=117  Identities=26%  Similarity=0.384  Sum_probs=93.0

Q ss_pred             CCeeecceecccCCeeEEEEEEcCCCEEEEEEeeccCccchhHHHHHHHHHhcccccCCCeeeeecceecCCCcccchhh
Q 039630           34 NGFRTSNKIGEGGFGSVYKGRLEDGTVVAVNVLSVESKQGETEFMSEVASMANINICHENLVKLHGGCIDGPSRILAPLQ  113 (174)
Q Consensus        34 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~avK~~~~~~~~~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~~~~~~~lv~~~  113 (174)
                      .+|+..+.||+|+||.||++.+..+..+++|.++.. ......+..|+.+++.++  |+|++++++.+......++++  
T Consensus         4 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~k~~~~~-~~~~~~~~~e~~~l~~l~--~~~i~~~~~~~~~~~~~~~v~--   78 (256)
T cd05112           4 SELTLVQEIGSGQFGLVWLGYWLEKRKVAIKTIREG-AMSEEDFIEEAQVMMKLS--HPKLVQLYGVCTERSPICLVF--   78 (256)
T ss_pred             hHeEEEeeecCcccceEEEEEEeCCCeEEEEECCCC-CCCHHHHHHHHHHHHhCC--CCCeeeEEEEEccCCceEEEE--
Confidence            467888999999999999998766788999988644 233457889999999999  999999999998888887877  


Q ss_pred             hhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhcc
Q 039630          114 ASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEI  170 (174)
Q Consensus       114 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  170 (174)
                      ++.+++.+...+.               .....+++..+..++.|++.|++|||++.
T Consensus        79 e~~~~~~L~~~~~---------------~~~~~~~~~~~~~~~~~l~~~l~~lH~~~  120 (256)
T cd05112          79 EFMEHGCLSDYLR---------------AQRGKFSQETLLGMCLDVCEGMAYLESSN  120 (256)
T ss_pred             EcCCCCcHHHHHH---------------hCccCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            6666666554331               11224678888999999999999999754

Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ

>cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1

Probab=99.52  E-value=1.5e-13  Score=99.17  Aligned_cols=133  Identities=24%  Similarity=0.306  Sum_probs=94.7

Q ss_pred             CCeeecceecccCCeeEEEEEE-----cCCCEEEEEEeeccC-ccchhHHHHHHHHHhcccccCCCeeeeecceecCCCc
Q 039630           34 NGFRTSNKIGEGGFGSVYKGRL-----EDGTVVAVNVLSVES-KQGETEFMSEVASMANINICHENLVKLHGGCIDGPSR  107 (174)
Q Consensus        34 ~~~~~~~~lg~G~~g~V~~~~~-----~~~~~~avK~~~~~~-~~~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~~~~~~  107 (174)
                      ++|++.+.||+|+||.||+|..     ..+..+++|.++... ......+.+|+.+++.++  |+|++++++.+...+..
T Consensus         5 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~E~~~l~~l~--h~niv~~~~~~~~~~~~   82 (283)
T cd05090           5 SAVRFMEELGECAFGKIYKGHLYLPGMDHAQLVAIKTLKDINNPQQWGEFQQEASLMAELH--HPNIVCLLGVVTQEQPV   82 (283)
T ss_pred             hhceeeeeccccCCcceEEEEEecCCCCCcceEEEEeccCCCCHHHHHHHHHHHHHHhhCC--CCCeeeEEEEEecCCce
Confidence            4678889999999999999973     245789999997442 233457889999999999  99999999999998888


Q ss_pred             ccchhhhhhhhhhhhhhhhcccceeeeeeecC-CCCCcccCCHHHHHHHHHHHHHHHHHhhhcc
Q 039630          108 ILAPLQASIEALFLFTKLWKMDKFISIYVVSG-SKKNRVKFNWIARREIALGIARGLAYIHEEI  170 (174)
Q Consensus       108 ~lv~~~~~~~~~~l~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  170 (174)
                      ++++  ++...+.+...+.............. .......+++..+..++.|++.||+|||++.
T Consensus        83 ~lv~--e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~  144 (283)
T cd05090          83 CMLF--EYLNQGDLHEFLIMRSPHSDVGCSSDEDGTVKSSLDHGDFLHIAIQIAAGMEYLSSHF  144 (283)
T ss_pred             EEEE--EcCCCCcHHHHHHhcCCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHhcC
Confidence            8888  66666665543321110000000000 0011234788889999999999999999864

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly

>cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases

Probab=99.52  E-value=1e-13  Score=98.53  Aligned_cols=118  Identities=26%  Similarity=0.450  Sum_probs=95.0

Q ss_pred             cCCeeecceecccCCeeEEEEEEcCCCEEEEEEeeccCccchhHHHHHHHHHhcccccCCCeeeeecceecCCCcccchh
Q 039630           33 TNGFRTSNKIGEGGFGSVYKGRLEDGTVVAVNVLSVESKQGETEFMSEVASMANINICHENLVKLHGGCIDGPSRILAPL  112 (174)
Q Consensus        33 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~avK~~~~~~~~~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~~~~~~~lv~~  112 (174)
                      .++|+..+.||.|+||.||++... +..+++|.++.... ....+.+|+.+++.++  |+|++++++.+...+..++++ 
T Consensus         5 ~~~~~~~~~ig~g~~g~v~~~~~~-~~~v~iK~~~~~~~-~~~~~~~e~~~l~~l~--~~~i~~~~~~~~~~~~~~~v~-   79 (256)
T cd05039           5 SKELKLGATIGKGEFGDVMLGDYR-GQKVAVKCLKDDST-AAQAFLAEASVMTTLR--HPNLVQLLGVVLQGNPLYIVT-   79 (256)
T ss_pred             hhhccceeeeecCCCceEEEEEec-CcEEEEEEeccchh-HHHHHHHHHHHHHhcC--CcceeeeEEEEcCCCCeEEEE-
Confidence            457888899999999999999865 78899999975533 4567889999999999  999999999998888888888 


Q ss_pred             hhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhcc
Q 039630          113 QASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEI  170 (174)
Q Consensus       113 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  170 (174)
                       ++.+.+.+...+..              .....+++..+..++.|++.||.|||++.
T Consensus        80 -e~~~~~~L~~~~~~--------------~~~~~~~~~~~~~~~~qi~~~l~~lh~~~  122 (256)
T cd05039          80 -EYMAKGSLVDYLRS--------------RGRAVITLAQQLGFALDVCEGMEYLEEKN  122 (256)
T ss_pred             -EecCCCcHHHHHHh--------------cCCCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence             66666666553311              11124788999999999999999999864

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk

>cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B

Probab=99.52  E-value=9.3e-14  Score=100.52  Aligned_cols=132  Identities=23%  Similarity=0.356  Sum_probs=98.2

Q ss_pred             hcCCeeecceecccCCeeEEEEEE------cCCCEEEEEEeeccCccchhHHHHHHHHHhcccccCCCeeeeecceecCC
Q 039630           32 ATNGFRTSNKIGEGGFGSVYKGRL------EDGTVVAVNVLSVESKQGETEFMSEVASMANINICHENLVKLHGGCIDGP  105 (174)
Q Consensus        32 ~~~~~~~~~~lg~G~~g~V~~~~~------~~~~~~avK~~~~~~~~~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~~~~  105 (174)
                      .+.+|.+.+.||+|+||.||.+..      .++..+++|.+..........+.+|+.++.+++  |+|++++++.+...+
T Consensus         3 ~~~~~~~~~~lg~G~~~~v~~~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~l~--h~~i~~~~~~~~~~~   80 (288)
T cd05093           3 KRHNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQ--HEHIVKFYGVCVEGD   80 (288)
T ss_pred             chHHeeeccccCCcCCeeEEeeEeccCCCCCcceEEEEEecCCcCHHHHHHHHHHHHHHHhCC--CCCcceEEEEEecCC
Confidence            346788999999999999999873      234568999887554445667899999999999  999999999999888


Q ss_pred             CcccchhhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhcc
Q 039630          106 SRILAPLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEI  170 (174)
Q Consensus       106 ~~~lv~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  170 (174)
                      ..++++  ++.+++.+...+...+......   ........+++..+..++.|++.||+|||++.
T Consensus        81 ~~~lv~--e~~~~~~L~~~i~~~~~~~~~~---~~~~~~~~l~~~~~~~~~~ql~~aL~~lH~~~  140 (288)
T cd05093          81 PLIMVF--EYMKHGDLNKFLRAHGPDAVLM---AEGNRPAELTQSQMLHIAQQIAAGMVYLASQH  140 (288)
T ss_pred             ccEEEE--EcCCCCCHHHHHHHcCCccccc---cccCCCCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            888888  7777666655432221111110   01122235889999999999999999999864

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly

>KOG0577 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.52  E-value=3.4e-14  Score=108.40  Aligned_cols=116  Identities=26%  Similarity=0.373  Sum_probs=92.7

Q ss_pred             CeeecceecccCCeeEEEEE-EcCCCEEEEEEeeccCcc---chhHHHHHHHHHhcccccCCCeeeeecceecCCCcccc
Q 039630           35 GFRTSNKIGEGGFGSVYKGR-LEDGTVVAVNVLSVESKQ---GETEFMSEVASMANINICHENLVKLHGGCIDGPSRILA  110 (174)
Q Consensus        35 ~~~~~~~lg~G~~g~V~~~~-~~~~~~~avK~~~~~~~~---~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~~~~~~~lv  110 (174)
                      -|.-++.||.|+||.||-+. ..+...||+|.+.-++..   ...++..|+..|+++.  |||.+.+-|++......++|
T Consensus        27 lf~dLrEIGHGSFGAVYfArd~~n~evVAIKKMsySGKQs~EKWqDIlKEVrFL~~l~--HPntieYkgCyLre~TaWLV  104 (948)
T KOG0577|consen   27 LFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDILKEVRFLRQLR--HPNTIEYKGCYLREHTAWLV  104 (948)
T ss_pred             HHHHHHHhcCCccceeEEeeccCccceeeeeeccccccccHHHHHHHHHHHHHHHhcc--CCCcccccceeeccchHHHH
Confidence            36667899999999999998 677889999999755433   3567999999999999  99999999999998887777


Q ss_pred             hhhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhcc
Q 039630          111 PLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEI  170 (174)
Q Consensus       111 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  170 (174)
                      |+|+......++.                  ..+.++.+..+..|+.+.+.||+|||+..
T Consensus       105 MEYClGSAsDlle------------------VhkKplqEvEIAAi~~gaL~gLaYLHS~~  146 (948)
T KOG0577|consen  105 MEYCLGSASDLLE------------------VHKKPLQEVEIAAITHGALQGLAYLHSHN  146 (948)
T ss_pred             HHHHhccHHHHHH------------------HHhccchHHHHHHHHHHHHHHHHHHHHhh
Confidence            7544443333332                  12346788899999999999999999864

>cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3

Probab=99.52  E-value=7.9e-14  Score=102.66  Aligned_cols=111  Identities=28%  Similarity=0.320  Sum_probs=85.6

Q ss_pred             ceecccCCeeEEEEE-EcCCCEEEEEEeeccC---ccchhHHHHHHH-HHhcccccCCCeeeeecceecCCCcccchhhh
Q 039630           40 NKIGEGGFGSVYKGR-LEDGTVVAVNVLSVES---KQGETEFMSEVA-SMANINICHENLVKLHGGCIDGPSRILAPLQA  114 (174)
Q Consensus        40 ~~lg~G~~g~V~~~~-~~~~~~~avK~~~~~~---~~~~~~~~~e~~-~l~~l~~~h~~i~~~~~~~~~~~~~~lv~~~~  114 (174)
                      +.||+|+||.||++. ..+|+.+|+|++....   ......+..|.. +++.++  |+||+++++.+...+..++++  +
T Consensus         1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~--hp~iv~~~~~~~~~~~~~lv~--e   76 (325)
T cd05604           1 KVIGKGSFGKVLLAKRKLDGKCYAVKVLQKKIVLNRKEQKHIMAERNVLLKNVK--HPFLVGLHYSFQTTEKLYFVL--D   76 (325)
T ss_pred             CceeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHHhCC--CCCCccEEEEEecCCEEEEEE--c
Confidence            368999999999998 5578999999997541   223344555554 466788  999999999999998888888  7


Q ss_pred             hhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhcc
Q 039630          115 SIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEI  170 (174)
Q Consensus       115 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  170 (174)
                      +..++.+...+.                ....+++..+..++.||+.||+|||++.
T Consensus        77 ~~~~~~L~~~l~----------------~~~~~~~~~~~~~~~qi~~al~~lH~~g  116 (325)
T cd05604          77 FVNGGELFFHLQ----------------RERSFPEPRARFYAAEIASALGYLHSIN  116 (325)
T ss_pred             CCCCCCHHHHHH----------------HcCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            777776654331                2234788899999999999999999864

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels,

>cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5

Probab=99.52  E-value=8.9e-14  Score=100.27  Aligned_cols=116  Identities=19%  Similarity=0.293  Sum_probs=90.1

Q ss_pred             CeeecceecccCCeeEEEEE-EcCCCEEEEEEeeccC--ccchhHHHHHHHHHhcccccCCCeeeeecceecCCCcccch
Q 039630           35 GFRTSNKIGEGGFGSVYKGR-LEDGTVVAVNVLSVES--KQGETEFMSEVASMANINICHENLVKLHGGCIDGPSRILAP  111 (174)
Q Consensus        35 ~~~~~~~lg~G~~g~V~~~~-~~~~~~~avK~~~~~~--~~~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~~~~~~~lv~  111 (174)
                      +|+..+.||+|+||.||++. ..+|..+++|.++...  ......+.+|+.+++.++  |+|++++++.+......++++
T Consensus         1 ~y~~~~~l~~g~~~~vy~~~~~~~g~~~~~k~~~~~~~~~~~~~~~~~ei~~l~~l~--h~~i~~~~~~~~~~~~~~lv~   78 (284)
T cd07839           1 KYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELK--HKNIVRLYDVLHSDKKLTLVF   78 (284)
T ss_pred             CceeEEEecccCCeEEEEEEECCCCcEEEEEEeecccccccCccchhHHHHHHHhcC--CCCeeeHHHHhccCCceEEEE
Confidence            37778999999999999999 4578899999997542  223456778999999999  999999999999888888887


Q ss_pred             hhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhcc
Q 039630          112 LQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEI  170 (174)
Q Consensus       112 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  170 (174)
                        ++.+. .+...+.               .....+++..+..++.||+.||.|||++.
T Consensus        79 --e~~~~-~l~~~~~---------------~~~~~~~~~~~~~~~~qi~~al~~LH~~~  119 (284)
T cd07839          79 --EYCDQ-DLKKYFD---------------SCNGDIDPEIVKSFMFQLLKGLAFCHSHN  119 (284)
T ss_pred             --ecCCC-CHHHHHH---------------hcCCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence              54442 2322221               11234789999999999999999999854

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also

>cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase

Probab=99.52  E-value=9.6e-14  Score=100.79  Aligned_cols=116  Identities=16%  Similarity=0.252  Sum_probs=95.1

Q ss_pred             CCeeecceecccCCeeEEEEE-EcCCCEEEEEEeeccCccchhHHHHHHHHHhcccccCCCeeeeecceecCCCcccchh
Q 039630           34 NGFRTSNKIGEGGFGSVYKGR-LEDGTVVAVNVLSVESKQGETEFMSEVASMANINICHENLVKLHGGCIDGPSRILAPL  112 (174)
Q Consensus        34 ~~~~~~~~lg~G~~g~V~~~~-~~~~~~~avK~~~~~~~~~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~~~~~~~lv~~  112 (174)
                      ++|...+.||+|+||.||++. ..++..+++|.+........+.+.+|+.+++.++  |+|++++++.+...+..++++ 
T Consensus        19 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~--hp~i~~~~~~~~~~~~~~lv~-   95 (293)
T cd06647          19 KKYTRFEKIGQGASGTVYTAIDVATGQEVAIKQMNLQQQPKKELIINEILVMRENK--HPNIVNYLDSYLVGDELWVVM-   95 (293)
T ss_pred             hhceeeeEecCCCCeEEEEEEEcCCCCEEEEEEeccccchHHHHHHHHHHHHhhcC--CCCeeehhheeeeCCcEEEEE-
Confidence            568888999999999999998 4568899999987554455667889999999998  999999999999888888888 


Q ss_pred             hhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhcc
Q 039630          113 QASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEI  170 (174)
Q Consensus       113 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  170 (174)
                       ++.+++.+...+.                 ...+++..+..++.|++.||.|||++.
T Consensus        96 -e~~~~~~L~~~~~-----------------~~~l~~~~~~~i~~~l~~al~~LH~~g  135 (293)
T cd06647          96 -EYLAGGSLTDVVT-----------------ETCMDEGQIAAVCRECLQALEFLHSNQ  135 (293)
T ss_pred             -ecCCCCcHHHHHh-----------------hcCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence             7777666655331                 123677888899999999999999864

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi

>cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin

Probab=99.52  E-value=8e-14  Score=100.61  Aligned_cols=129  Identities=19%  Similarity=0.224  Sum_probs=95.7

Q ss_pred             echhhHHhhcCCeeecceecccCCeeEEEEE-EcCCCEEEEEEeeccCccchhHHHHHHHHHhcc-cccCCCeeeeecce
Q 039630           24 ISYNELKIATNGFRTSNKIGEGGFGSVYKGR-LEDGTVVAVNVLSVESKQGETEFMSEVASMANI-NICHENLVKLHGGC  101 (174)
Q Consensus        24 ~~~~~~~~~~~~~~~~~~lg~G~~g~V~~~~-~~~~~~~avK~~~~~~~~~~~~~~~e~~~l~~l-~~~h~~i~~~~~~~  101 (174)
                      +.++.+....++|++.+.||+|+||.||++. ..++..+++|+++.. ......+..|+.++..+ +  |+|++++++.+
T Consensus         8 ~~~~~~~~~~~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~-~~~~~~~~~e~~~l~~l~~--h~~i~~~~~~~   84 (286)
T cd06638           8 IIFDSFPDPSDTWEIIETIGKGTYGKVFKVLNKKNGSKAAVKILDPI-HDIDEEIEAEYNILKALSD--HPNVVKFYGMY   84 (286)
T ss_pred             EEeecCCCcccceeeeeeeccCCCcEEEEEEECCCCceeEEEeeccc-cchHHHHHHHHHHHHHHhc--CCCeeeeeeee
Confidence            5566777788899999999999999999998 456889999988643 22345677899999888 6  99999999987


Q ss_pred             ec-----CCCcccchhhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhc
Q 039630          102 ID-----GPSRILAPLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEE  169 (174)
Q Consensus       102 ~~-----~~~~~lv~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~  169 (174)
                      ..     .+..++++  ++.+++.+...+..            .......+++..+..++.|++.||.|||++
T Consensus        85 ~~~~~~~~~~~~lv~--e~~~~~~L~~~l~~------------~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~  143 (286)
T cd06638          85 YKKDVKNGDQLWLVL--ELCNGGSVTDLVKG------------FLKRGERMEEPIIAYILHEALMGLQHLHVN  143 (286)
T ss_pred             eecccCCCCeEEEEE--eecCCCCHHHHHHH------------hhccCccccHHHHHHHHHHHHHHHHHHHhC
Confidence            43     34456666  66666655432210            011223578888899999999999999975

Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear

>cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85

Probab=99.52  E-value=2.6e-13  Score=97.76  Aligned_cols=118  Identities=24%  Similarity=0.406  Sum_probs=91.8

Q ss_pred             CeeecceecccCCeeEEEEEE-cCCCEEEEEEeeccC-ccchhHHHHHHHHHhcccccCCCeeeeecceecCCCcccchh
Q 039630           35 GFRTSNKIGEGGFGSVYKGRL-EDGTVVAVNVLSVES-KQGETEFMSEVASMANINICHENLVKLHGGCIDGPSRILAPL  112 (174)
Q Consensus        35 ~~~~~~~lg~G~~g~V~~~~~-~~~~~~avK~~~~~~-~~~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~~~~~~~lv~~  112 (174)
                      +|+..+.||.|++|.||+|.. .++..+++|.++... ......+..|+.+++.++  |+|++++++.+...+..++++ 
T Consensus         1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~E~~~l~~l~--h~~i~~~~~~~~~~~~~~lv~-   77 (284)
T cd07836           1 NFKQLEKLGEGTYATVYKGRNRTTGEIVALKEIHLDAEEGTPSTAIREISLMKELK--HENIVRLHDVIHTENKLMLVF-   77 (284)
T ss_pred             CceEeeeeccCCceEEEEEEECCCCeEEEEEEecccccccchHHHHHHHHHHHhhc--CCCEeeeeeeEeeCCcEEEEE-
Confidence            477889999999999999994 568899999997653 233456778999999999  999999999999998888888 


Q ss_pred             hhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhcc
Q 039630          113 QASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEI  170 (174)
Q Consensus       113 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  170 (174)
                       ++.++ .+...+..             ......+++..+..++.|++.||+|||+..
T Consensus        78 -e~~~~-~l~~~~~~-------------~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~  120 (284)
T cd07836          78 -EYMDK-DLKKYMDT-------------HGVRGALDPNTVKSFTYQLLKGIAFCHENR  120 (284)
T ss_pred             -ecCCc-cHHHHHHh-------------cCCCCCcCHHHHHHHHHHHHHHHHHHHHCC
Confidence             55543 33221110             111235789999999999999999999863

Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment.

>cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase

Probab=99.52  E-value=1.1e-13  Score=100.12  Aligned_cols=134  Identities=28%  Similarity=0.340  Sum_probs=97.3

Q ss_pred             cCCeeecceecccCCeeEEEEEEc------CCCEEEEEEeeccC-ccchhHHHHHHHHHhcccccCCCeeeeecceecCC
Q 039630           33 TNGFRTSNKIGEGGFGSVYKGRLE------DGTVVAVNVLSVES-KQGETEFMSEVASMANINICHENLVKLHGGCIDGP  105 (174)
Q Consensus        33 ~~~~~~~~~lg~G~~g~V~~~~~~------~~~~~avK~~~~~~-~~~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~~~~  105 (174)
                      .++|+....||+|+||.||++...      ++..+++|.++... ......+.+|+.++..++  |+|++++++.+...+
T Consensus         4 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~ei~~l~~l~--h~~iv~~~~~~~~~~   81 (288)
T cd05050           4 RNNIEYVRDIGQGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFD--HPNIVKLLGVCAVGK   81 (288)
T ss_pred             hHhceecccccccccccEEEEEEcccCCCCcceeEEEEecCCCcCHHHHHHHHHHHHHHHhcC--CCchheEEEEEcCCC
Confidence            457888999999999999999842      46789999987543 233456888999999999  999999999999888


Q ss_pred             Ccccchhhhhhhhhhhhhhhhcccceeeeee------ecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhcc
Q 039630          106 SRILAPLQASIEALFLFTKLWKMDKFISIYV------VSGSKKNRVKFNWIARREIALGIARGLAYIHEEI  170 (174)
Q Consensus       106 ~~~lv~~~~~~~~~~l~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  170 (174)
                      ..++++  ++...+.+...+...........      ..........+++..++.++.|++.||+|||++.
T Consensus        82 ~~~lv~--e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~aL~~lH~~~  150 (288)
T cd05050          82 PMCLLF--EYMAYGDLNEFLRHRSPRAQCSLSHSTSSARKCGLNPLPLSCTEQLCIAKQVAAGMAYLSERK  150 (288)
T ss_pred             ccEEEE--ecCCCCCHHHHHHHcCccccccccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhCC
Confidence            888888  77666666554433221111000      0001112234788889999999999999999864

Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M

>cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2

Probab=99.52  E-value=1.1e-13  Score=98.90  Aligned_cols=118  Identities=25%  Similarity=0.412  Sum_probs=92.8

Q ss_pred             CCeeecceecccCCeeEEEEEEc-CC---CEEEEEEeecc-CccchhHHHHHHHHHhcccccCCCeeeeecceecCCCcc
Q 039630           34 NGFRTSNKIGEGGFGSVYKGRLE-DG---TVVAVNVLSVE-SKQGETEFMSEVASMANINICHENLVKLHGGCIDGPSRI  108 (174)
Q Consensus        34 ~~~~~~~~lg~G~~g~V~~~~~~-~~---~~~avK~~~~~-~~~~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~~~~~~~  108 (174)
                      ++|...+.||+|+||.||++... ++   ..+++|.++.. .......+..|+.++..++  |+|++++.+.+...+..+
T Consensus         5 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~--h~~i~~~~~~~~~~~~~~   82 (268)
T cd05063           5 SHITKQKVIGAGEFGEVFRGILKMPGRKEVAVAIKTLKPGYTEKQRQDFLSEASIMGQFS--HHNIIRLEGVVTKFKPAM   82 (268)
T ss_pred             HHceEeeEecCCCCccEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHHHHHhcCC--CCCeeEEEEEEccCCCcE
Confidence            46788899999999999999843 33   37899988654 2334567889999999999  999999999999888888


Q ss_pred             cchhhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhcc
Q 039630          109 LAPLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEI  170 (174)
Q Consensus       109 lv~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  170 (174)
                      +++  ++.+++.+...+.               .....+++..+..++.|++.|++|||+..
T Consensus        83 lv~--e~~~~~~L~~~~~---------------~~~~~~~~~~~~~~~~~l~~al~~lH~~~  127 (268)
T cd05063          83 IIT--EYMENGALDKYLR---------------DHDGEFSSYQLVGMLRGIAAGMKYLSDMN  127 (268)
T ss_pred             EEE--EcCCCCCHHHHHH---------------hcCCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            888  6666666654331               11234788888999999999999999764

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored

>cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6

Probab=99.52  E-value=1.3e-13  Score=99.65  Aligned_cols=116  Identities=22%  Similarity=0.260  Sum_probs=90.4

Q ss_pred             eeecceecccCCeeEEEEE-EcCCCEEEEEEeeccCc---cchhHHHHHHHHHhcccccCCCeeeeecceecCCCcccch
Q 039630           36 FRTSNKIGEGGFGSVYKGR-LEDGTVVAVNVLSVESK---QGETEFMSEVASMANINICHENLVKLHGGCIDGPSRILAP  111 (174)
Q Consensus        36 ~~~~~~lg~G~~g~V~~~~-~~~~~~~avK~~~~~~~---~~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~~~~~~~lv~  111 (174)
                      |+..+.||+|+||.||++. ..+++.+|+|.+.....   .....+..|+.+++.++  |++++.+.+.+...+..++++
T Consensus         2 f~~~~~ig~G~~g~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~--~~~i~~~~~~~~~~~~~~lv~   79 (285)
T cd05630           2 FRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGESMALNEKQILEKVN--SRFVVSLAYAYETKDALCLVL   79 (285)
T ss_pred             ceeeEEeecCCCeEEEEEEEcCCCceEEEEEEehhhccchHHHHHHHHHHHHHHhCC--CCCeeeeeEEEecCCEEEEEE
Confidence            5667899999999999998 55788999999875421   22345678999999998  999999999999888888888


Q ss_pred             hhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhc
Q 039630          112 LQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEE  169 (174)
Q Consensus       112 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~  169 (174)
                        ++..++.+...+..              .....+++..+..++.|++.||.|||+.
T Consensus        80 --e~~~g~~L~~~l~~--------------~~~~~l~~~~~~~~~~qi~~~l~~lH~~  121 (285)
T cd05630          80 --TLMNGGDLKFHIYH--------------MGEAGFEEGRAVFYAAEICCGLEDLHQE  121 (285)
T ss_pred             --EecCCCcHHHHHHH--------------hcccCCCHHHHHHHHHHHHHHHHHHHhC
Confidence              66666665443211              1112478888999999999999999975

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as

>cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase

Probab=99.52  E-value=1.4e-13  Score=100.33  Aligned_cols=117  Identities=18%  Similarity=0.140  Sum_probs=93.5

Q ss_pred             CCeeecceecccCCeeEEEEE-EcCCCEEEEEEeeccC---ccchhHHHHHHHHHhcccccCCCeeeeecceecCCCccc
Q 039630           34 NGFRTSNKIGEGGFGSVYKGR-LEDGTVVAVNVLSVES---KQGETEFMSEVASMANINICHENLVKLHGGCIDGPSRIL  109 (174)
Q Consensus        34 ~~~~~~~~lg~G~~g~V~~~~-~~~~~~~avK~~~~~~---~~~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~~~~~~~l  109 (174)
                      ++|...+.||+|+||.||++. ...++.+++|.+....   ......+..|+.+++.++  |+||+++++.+...+..++
T Consensus         1 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~e~~~l~~~~--~~~i~~~~~~~~~~~~~~l   78 (305)
T cd05609           1 EDFETIKLISNGAYGAVYLVRHKETRQRFAMKKINKQNLILRNQIQQVFVERDILTFAE--NPFVVSMFCSFETKRHLCM   78 (305)
T ss_pred             CCceEeeEeecCCCeeEEEEEECCCCcEEEEEEeehhhhhhHHHHHHHHHHHHHHHhCC--CCCeeeeEEEEecCCEEEE
Confidence            368888999999999999998 4567899999987542   223456788999999998  9999999999998888888


Q ss_pred             chhhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhcc
Q 039630          110 APLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEI  170 (174)
Q Consensus       110 v~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  170 (174)
                      ++  ++.+++.+...+                .....+++..+..++.|++.||.|||++.
T Consensus        79 v~--e~~~g~~L~~~l----------------~~~~~~~~~~~~~~~~~i~~~l~~lH~~~  121 (305)
T cd05609          79 VM--EYVEGGDCATLL----------------KNIGALPVDMARMYFAETVLALEYLHNYG  121 (305)
T ss_pred             EE--ecCCCCcHHHHH----------------HHcCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            88  766666655433                11234788888899999999999999864

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a

>cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors

Probab=99.52  E-value=7.8e-14  Score=101.68  Aligned_cols=124  Identities=23%  Similarity=0.355  Sum_probs=95.4

Q ss_pred             HHhhcCCeeecceecccCCeeEEEEEE------cCCCEEEEEEeeccC-ccchhHHHHHHHHHhcc-cccCCCeeeeecc
Q 039630           29 LKIATNGFRTSNKIGEGGFGSVYKGRL------EDGTVVAVNVLSVES-KQGETEFMSEVASMANI-NICHENLVKLHGG  100 (174)
Q Consensus        29 ~~~~~~~~~~~~~lg~G~~g~V~~~~~------~~~~~~avK~~~~~~-~~~~~~~~~e~~~l~~l-~~~h~~i~~~~~~  100 (174)
                      +....++|...+.||+|+||.||++..      ..+..+|+|.++... ....+.+.+|+.+++++ +  |+||+++++.
T Consensus        30 ~~~~~~~~~~~~~ig~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~--h~~iv~~~~~  107 (302)
T cd05055          30 WEFPRNNLSFGKTLGAGAFGKVVEATAYGLSKSDAVMKVAVKMLKPTAHSSEREALMSELKIMSHLGN--HENIVNLLGA  107 (302)
T ss_pred             ccccHHHeEEcceeeccCCeeEEEEEEecCCCCCceeEEEEEecCccCChHHHHHHHHHHHHHHhccC--CCCcceEEEE
Confidence            445556799999999999999999873      134579999987542 23345788999999999 6  9999999999


Q ss_pred             eecCCCcccchhhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhcc
Q 039630          101 CIDGPSRILAPLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEI  170 (174)
Q Consensus       101 ~~~~~~~~lv~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  170 (174)
                      +...+..++++  ++..++.+...+..              .....+++..+..++.|++.||+|||++.
T Consensus       108 ~~~~~~~~lv~--e~~~~~~L~~~i~~--------------~~~~~l~~~~~~~i~~~i~~~l~~lH~~~  161 (302)
T cd05055         108 CTIGGPILVIT--EYCCYGDLLNFLRR--------------KRESFLTLEDLLSFSYQVAKGMAFLASKN  161 (302)
T ss_pred             EecCCceEEEE--EcCCCCcHHHHHHh--------------CCCCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            99888888888  66666666543311              11123788999999999999999999864

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept

>cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases

Probab=99.52  E-value=6.9e-14  Score=100.58  Aligned_cols=132  Identities=25%  Similarity=0.373  Sum_probs=98.4

Q ss_pred             cCCeeecceecccCCeeEEEEEEc------CCCEEEEEEeeccCcc-chhHHHHHHHHHhcccccCCCeeeeecceecCC
Q 039630           33 TNGFRTSNKIGEGGFGSVYKGRLE------DGTVVAVNVLSVESKQ-GETEFMSEVASMANINICHENLVKLHGGCIDGP  105 (174)
Q Consensus        33 ~~~~~~~~~lg~G~~g~V~~~~~~------~~~~~avK~~~~~~~~-~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~~~~  105 (174)
                      .++|.+.+.||+|+||.||+|...      ++..+|+|.++..... ....+.+|+.++..+.  |+|++++++.+....
T Consensus         4 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~--~~~i~~~~~~~~~~~   81 (280)
T cd05049           4 RDTIVLKRELGEGAFGKVFLGECYHLEPENDKELVAVKTLKETASNDARKDFEREAELLTNFQ--HENIVKFYGVCTEGD   81 (280)
T ss_pred             hHHhhHHhhccccCCceEeeeeeccccCcCCcceEEEEeecccCCHHHHHHHHHHHHHHHhcC--CCCchheeeEEecCC
Confidence            346778899999999999999842      3478999999755333 4567899999999999  999999999999998


Q ss_pred             CcccchhhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhcc
Q 039630          106 SRILAPLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEI  170 (174)
Q Consensus       106 ~~~lv~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  170 (174)
                      ..++++  ++.+++.+...+...+.....  ..........+++..+..++.|++.|+.|||++.
T Consensus        82 ~~~lv~--e~~~~~~L~~~i~~~~~~~~~--~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~  142 (280)
T cd05049          82 PPIMVF--EYMEHGDLNKFLRSHGPDAAF--LKSPDSPMGELTLSQLLQIAVQIASGMVYLASQH  142 (280)
T ss_pred             CeEEEE--ecCCCCCHHHHHHhcCCchhh--hcccccccccccHHHHHHHHHHHHHHHHHHhhCC
Confidence            888888  777777766554332211100  0001122345788899999999999999999854

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt

>cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1

Probab=99.52  E-value=7.4e-14  Score=99.35  Aligned_cols=116  Identities=22%  Similarity=0.231  Sum_probs=93.9

Q ss_pred             CeeecceecccCCeeEEEEEE-cCCCEEEEEEeeccC---ccchhHHHHHHHHHhcccccCCCeeeeecceecCCCcccc
Q 039630           35 GFRTSNKIGEGGFGSVYKGRL-EDGTVVAVNVLSVES---KQGETEFMSEVASMANINICHENLVKLHGGCIDGPSRILA  110 (174)
Q Consensus        35 ~~~~~~~lg~G~~g~V~~~~~-~~~~~~avK~~~~~~---~~~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~~~~~~~lv  110 (174)
                      +|...+.||.|+||.||++.. .++..+++|++....   ....+.+.+|+.++++++  |+|++++++.+...+..+++
T Consensus         1 ~y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~--h~~i~~~~~~~~~~~~~~lv   78 (258)
T cd05578           1 HFELLRVIGKGAFGKVCIVQKRDTKKMFAMKYMNKQKCVEKGSVRNVLNERRILQELN--HPFLVNLWYSFQDEENMYLV   78 (258)
T ss_pred             CceEEEEeccCCCceEEEEEEccCCcEEEEEEEehhhhcchhHHHHHHHHHHHHHhCC--CCChHHHHHhhcCCCeEEEE
Confidence            477889999999999999994 468899999997542   234567899999999999  99999999999988888888


Q ss_pred             hhhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhcc
Q 039630          111 PLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEI  170 (174)
Q Consensus       111 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  170 (174)
                      +  ++..++.+...+.                ....+++..+..++.|++.||.|||++.
T Consensus        79 ~--e~~~~~~L~~~l~----------------~~~~l~~~~~~~~~~~i~~~l~~lh~~~  120 (258)
T cd05578          79 V--DLLLGGDLRYHLS----------------QKVKFSEEQVKFWICEIVLALEYLHSKG  120 (258)
T ss_pred             E--eCCCCCCHHHHHH----------------hcCCcCHHHHHHHHHHHHHHHHHHHhCC
Confidence            8  6666666554331                1135788889999999999999999864

Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A.

>PRK13184 pknD serine/threonine-protein kinase; Reviewed

Probab=99.52  E-value=1e-13  Score=112.35  Aligned_cols=128  Identities=23%  Similarity=0.225  Sum_probs=95.1

Q ss_pred             CCeeecceecccCCeeEEEEE-EcCCCEEEEEEeeccC---ccchhHHHHHHHHHhcccccCCCeeeeecceecCCCccc
Q 039630           34 NGFRTSNKIGEGGFGSVYKGR-LEDGTVVAVNVLSVES---KQGETEFMSEVASMANINICHENLVKLHGGCIDGPSRIL  109 (174)
Q Consensus        34 ~~~~~~~~lg~G~~g~V~~~~-~~~~~~~avK~~~~~~---~~~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~~~~~~~l  109 (174)
                      ++|.+.+.||+|+||.||+|. ..++..||+|+++...   ......+.+|+.++..++  |||++++++.+...+..++
T Consensus         2 grYeIi~~LGkGgfG~VYlA~d~~tg~~VAIK~I~~~l~~~e~~~~rflrEi~ILs~L~--HPNIVkl~~v~~d~~~lyL   79 (932)
T PRK13184          2 QRYDIIRLIGKGGMGEVYLAYDPVCSRRVALKKIREDLSENPLLKKRFLREAKIAADLI--HPGIVPVYSICSDGDPVYY   79 (932)
T ss_pred             CCeEEEEEEecCCCEEEEEEEECCCCcEEEEEEECcccccCHHHHHHHHHHHHHHHhCC--CcCcCeEEEEEeeCCEEEE
Confidence            468899999999999999998 4568899999997542   223456889999999999  9999999999998888888


Q ss_pred             chhhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhcc
Q 039630          110 APLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEI  170 (174)
Q Consensus       110 v~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  170 (174)
                      ++  ++.+++.+...+........   .  ........++..++.++.|++.||+|||++.
T Consensus        80 VM--EY~eGGSL~~lL~s~~~~~~---l--~e~~~~~lsv~~iL~I~~QIa~AL~yLHs~G  133 (932)
T PRK13184         80 TM--PYIEGYTLKSLLKSVWQKES---L--SKELAEKTSVGAFLSIFHKICATIEYVHSKG  133 (932)
T ss_pred             EE--EcCCCCCHHHHHHHhhhccc---c--chhhhcccCHHHHHHHHHHHHHHHHHHHHCC
Confidence            88  77776666543321100000   0  0011223567788899999999999999864

>cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9

Probab=99.51  E-value=2.1e-13  Score=96.88  Aligned_cols=118  Identities=17%  Similarity=0.273  Sum_probs=94.1

Q ss_pred             CeeecceecccCCeeEEEEE-EcCCCEEEEEEeecc--CccchhHHHHHHHHHhcccccCCCeeeeecceecCCCcccch
Q 039630           35 GFRTSNKIGEGGFGSVYKGR-LEDGTVVAVNVLSVE--SKQGETEFMSEVASMANINICHENLVKLHGGCIDGPSRILAP  111 (174)
Q Consensus        35 ~~~~~~~lg~G~~g~V~~~~-~~~~~~~avK~~~~~--~~~~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~~~~~~~lv~  111 (174)
                      +|+..+.||+|+||.|+.+. ..++..+++|.+...  .......+.+|+.++++++  |+|++++++.+...+..++++
T Consensus         1 ~y~~~~~ig~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~~~--h~~i~~~~~~~~~~~~~~~~~   78 (256)
T cd08221           1 HYIPIRVLGKGAFGEATLYRRTEDDSLVVWKEVNLTRLSEKERRDALNEIVILSLLQ--HPNIIAYYNHFMDDNTLLIEM   78 (256)
T ss_pred             CceEeeEecccCCceEEEEEEcCCCcEEEEEEEeecccchhHHHHHHHHHHHHHhCC--CCCeeEEEeEEecCCeEEEEE
Confidence            47888999999999999888 566889999998754  2344567889999999998  999999999999988888777


Q ss_pred             hhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhcc
Q 039630          112 LQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEI  170 (174)
Q Consensus       112 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  170 (174)
                        ++.+++.+...+..              .....+++..+..++.|++.||.|||++.
T Consensus        79 --e~~~~~~L~~~~~~--------------~~~~~~~~~~~~~~~~~l~~~l~~lh~~~  121 (256)
T cd08221          79 --EYANGGTLYDKIVR--------------QKGQLFEEEMVLWYLFQIVSAVSYIHKAG  121 (256)
T ss_pred             --EecCCCcHHHHHHh--------------ccccCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence              77666666553311              11234788899999999999999999754

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa

>cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains

Probab=99.51  E-value=1.1e-13  Score=98.11  Aligned_cols=118  Identities=21%  Similarity=0.252  Sum_probs=94.3

Q ss_pred             CeeecceecccCCeeEEEEE-EcCCCEEEEEEeecc--CccchhHHHHHHHHHhcccccCCCeeeeecceecCCCcccch
Q 039630           35 GFRTSNKIGEGGFGSVYKGR-LEDGTVVAVNVLSVE--SKQGETEFMSEVASMANINICHENLVKLHGGCIDGPSRILAP  111 (174)
Q Consensus        35 ~~~~~~~lg~G~~g~V~~~~-~~~~~~~avK~~~~~--~~~~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~~~~~~~lv~  111 (174)
                      +|...+.||+|++|.||++. ..++..+++|.+...  .......+.+|+.+++.++  |+|++++++.+...+..++++
T Consensus         1 ~~~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~--h~~i~~~~~~~~~~~~~~lv~   78 (256)
T cd08529           1 DFEILNKIGKGSFGVVFKVVRKADKRVYAMKQIDLSKMNRREREEAIDEARVLAKLD--SSYIIRYYESFLDKGKLNIVM   78 (256)
T ss_pred             CceEeEEecCCCCeEEEEEEEcCCCcEEEEEEeehhhCCHHHHHHHHHHHHHHHhcC--CCCeehheeeeccCCEEEEEE
Confidence            46778899999999999999 456889999998754  2345667889999999999  999999999999888888888


Q ss_pred             hhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhcc
Q 039630          112 LQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEI  170 (174)
Q Consensus       112 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  170 (174)
                        ++.+++.+...+..              .....+++..+..++.|++.||.|||++.
T Consensus        79 --e~~~~~~L~~~l~~--------------~~~~~~~~~~~~~i~~~l~~al~~lH~~~  121 (256)
T cd08529          79 --EYAENGDLHKLLKM--------------QRGRPLPEDQVWRFFIQILLGLAHLHSKK  121 (256)
T ss_pred             --EeCCCCcHHHHHHH--------------hcCCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence              76666666543311              11234788888999999999999999854

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc

>cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases

Probab=99.51  E-value=1.3e-13  Score=99.27  Aligned_cols=117  Identities=26%  Similarity=0.442  Sum_probs=90.4

Q ss_pred             CCeeecceecccCCeeEEEEEEc-CCC----EEEEEEeeccC-ccchhHHHHHHHHHhcccccCCCeeeeecceecCCCc
Q 039630           34 NGFRTSNKIGEGGFGSVYKGRLE-DGT----VVAVNVLSVES-KQGETEFMSEVASMANINICHENLVKLHGGCIDGPSR  107 (174)
Q Consensus        34 ~~~~~~~~lg~G~~g~V~~~~~~-~~~----~~avK~~~~~~-~~~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~~~~~~  107 (174)
                      .+|+..+.||+|+||.||+|... ++.    .+++|.++... ......+.+|+.++..++  |+|++++++.+.. +..
T Consensus         7 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~--h~~i~~~~~~~~~-~~~   83 (279)
T cd05057           7 TELEKIKVLGSGAFGTVYKGVWIPEGEKVKIPVAIKVLREETSPKANKEILDEAYVMASVD--HPHVVRLLGICLS-SQV   83 (279)
T ss_pred             HHcEEcceecCCCCccEEEEEEecCCCCcceEEEEEeccCCCCHHHHHHHHHHHHHHHhCC--CCCcceEEEEEec-Cce
Confidence            56888899999999999999843 333    68899886553 234567889999999998  9999999999887 666


Q ss_pred             ccchhhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhcc
Q 039630          108 ILAPLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEI  170 (174)
Q Consensus       108 ~lv~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  170 (174)
                      ++++  ++.+.+.+...+.               .....+++..++.++.|++.||+|||++.
T Consensus        84 ~~v~--e~~~~g~L~~~l~---------------~~~~~~~~~~~~~~~~qi~~~l~~LH~~~  129 (279)
T cd05057          84 QLIT--QLMPLGCLLDYVR---------------NHKDNIGSQYLLNWCVQIAKGMSYLEEKR  129 (279)
T ss_pred             EEEE--ecCCCCcHHHHHH---------------hccCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            7777  6666666655331               11224788999999999999999999853

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea

>cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C

Probab=99.51  E-value=1.4e-13  Score=99.80  Aligned_cols=134  Identities=25%  Similarity=0.339  Sum_probs=97.6

Q ss_pred             cCCeeecceecccCCeeEEEEEE------cCCCEEEEEEeeccCccchhHHHHHHHHHhcccccCCCeeeeecceecCCC
Q 039630           33 TNGFRTSNKIGEGGFGSVYKGRL------EDGTVVAVNVLSVESKQGETEFMSEVASMANINICHENLVKLHGGCIDGPS  106 (174)
Q Consensus        33 ~~~~~~~~~lg~G~~g~V~~~~~------~~~~~~avK~~~~~~~~~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~~~~~  106 (174)
                      .++|.+.+.||+|+||.||.+..      .++..+++|.++.........+.+|+.+++.++  |+|++++++.+...+.
T Consensus         4 ~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~--h~~i~~~~~~~~~~~~   81 (291)
T cd05094           4 RRDIVLKRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQ--HEHIVKFYGVCGDGDP   81 (291)
T ss_pred             hHHeEEeeeecccCCCeEEEeEeeccCCCCcceeeEEEecCCccHHHHHHHHHHHHHHhcCC--CCCcceEEEEEccCCc
Confidence            34688889999999999999873      234568889887555445567889999999999  9999999999999888


Q ss_pred             cccchhhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhcc
Q 039630          107 RILAPLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEI  170 (174)
Q Consensus       107 ~~lv~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  170 (174)
                      .++++  ++.+++.+...+...+.................+++..++.++.|++.|++|||++.
T Consensus        82 ~~lv~--e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~  143 (291)
T cd05094          82 LIMVF--EYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQIASGMVYLASQH  143 (291)
T ss_pred             eEEEE--ecCCCCcHHHHHHhcCcccccccccccccCcCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            88888  777777665544322211000000001112235789999999999999999999864

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n

>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase

Probab=99.51  E-value=1e-13  Score=110.85  Aligned_cols=117  Identities=21%  Similarity=0.176  Sum_probs=93.6

Q ss_pred             CCeeecceecccCCeeEEEEEE-cCCCEEEEEEeeccC---ccchhHHHHHHHHHhcccccCCCeeeeecceecCCCccc
Q 039630           34 NGFRTSNKIGEGGFGSVYKGRL-EDGTVVAVNVLSVES---KQGETEFMSEVASMANINICHENLVKLHGGCIDGPSRIL  109 (174)
Q Consensus        34 ~~~~~~~~lg~G~~g~V~~~~~-~~~~~~avK~~~~~~---~~~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~~~~~~~l  109 (174)
                      ++|.+.+.||+|+||.||+|.. .++..||+|+++...   ......+..|+.++..++  |+||+++++.+...+..++
T Consensus         4 ~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAiKvi~~~~~~~~~~~~~~~~E~~~l~~l~--hp~Iv~~~~~~~~~~~~~l   81 (669)
T cd05610           4 EEFVIVKPISRGAFGKVYLGRKKNNSKLYAVKVVKKADMINKNMVHQVQAERDALALSK--SPFIVHLYYSLQSANNVYL   81 (669)
T ss_pred             CCEEEEEEEecCCCeEEEEEEECCCCcEEEEEEEehhhccCHHHHHHHHHHHHHHHhcC--CCCcCeEEEEEEECCEEEE
Confidence            5688999999999999999994 478899999997542   222456888999999998  9999999999988888888


Q ss_pred             chhhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhcc
Q 039630          110 APLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEI  170 (174)
Q Consensus       110 v~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  170 (174)
                      |+  ++..++.|...+.                ....+++..++.++.||+.||+|||++.
T Consensus        82 Vm--Ey~~g~~L~~li~----------------~~~~l~~~~~~~i~~qil~aL~yLH~~g  124 (669)
T cd05610          82 VM--EYLIGGDVKSLLH----------------IYGYFDEEMAVKYISEVALALDYLHRHG  124 (669)
T ss_pred             EE--eCCCCCCHHHHHH----------------hcCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            88  6666666654321                1124677888999999999999999863

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481

>cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta

Probab=99.51  E-value=1.1e-13  Score=101.57  Aligned_cols=111  Identities=18%  Similarity=0.199  Sum_probs=86.2

Q ss_pred             ceecccCCeeEEEEE-EcCCCEEEEEEeeccC---ccchhHHHHHHHHHhcc-cccCCCeeeeecceecCCCcccchhhh
Q 039630           40 NKIGEGGFGSVYKGR-LEDGTVVAVNVLSVES---KQGETEFMSEVASMANI-NICHENLVKLHGGCIDGPSRILAPLQA  114 (174)
Q Consensus        40 ~~lg~G~~g~V~~~~-~~~~~~~avK~~~~~~---~~~~~~~~~e~~~l~~l-~~~h~~i~~~~~~~~~~~~~~lv~~~~  114 (174)
                      +.||+|+||.||++. ..++..+|+|+++...   .........|..++... +  ||||+++++.+...+..++++  +
T Consensus         1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~--hp~iv~~~~~~~~~~~~~lv~--e   76 (316)
T cd05619           1 KMLGKGSFGKVFLAELKGTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWE--HPFLTHLYCTFQTKENLFFVM--E   76 (316)
T ss_pred             CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccC--CCcCcceEEEEEeCCEEEEEE--e
Confidence            368999999999999 4567899999997541   23344566777777754 6  999999999999988888888  7


Q ss_pred             hhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhcc
Q 039630          115 SIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEI  170 (174)
Q Consensus       115 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  170 (174)
                      +.+++.+...+.                ....+++.....++.|++.||.|||++.
T Consensus        77 y~~~g~L~~~l~----------------~~~~~~~~~~~~~~~qi~~al~~LH~~~  116 (316)
T cd05619          77 YLNGGDLMFHIQ----------------SCHKFDLPRATFYAAEIICGLQFLHSKG  116 (316)
T ss_pred             CCCCCcHHHHHH----------------HcCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            777777655331                1224678888899999999999999864

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in

>cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4

Probab=99.51  E-value=1.5e-13  Score=100.68  Aligned_cols=139  Identities=20%  Similarity=0.265  Sum_probs=97.3

Q ss_pred             HHhhcCCeeecceecccCCeeEEEEEE--------cCCCEEEEEEeecc-CccchhHHHHHHHHHhcccccCCCeeeeec
Q 039630           29 LKIATNGFRTSNKIGEGGFGSVYKGRL--------EDGTVVAVNVLSVE-SKQGETEFMSEVASMANINICHENLVKLHG   99 (174)
Q Consensus        29 ~~~~~~~~~~~~~lg~G~~g~V~~~~~--------~~~~~~avK~~~~~-~~~~~~~~~~e~~~l~~l~~~h~~i~~~~~   99 (174)
                      |.....+|.+.+.||+|+||.||++..        .....+|+|.++.. .......+..|+.++..+. .|+||+++++
T Consensus         7 ~~~~~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~-~h~~iv~~~~   85 (314)
T cd05099           7 WEFPRDRLVLGKPLGEGCFGQVVRAEAYGIDKSRPDQTVTVAVKMLKDNATDKDLADLISEMELMKLIG-KHKNIINLLG   85 (314)
T ss_pred             ccccHHHeeeeeeecCCCcccEEEeeecccCCccCCcceEEEEEecCCCCChHHHHHHHHHHHHHHhcc-CCCCeeeEEE
Confidence            444556788899999999999999873        12457899998754 2234556888999999883 3999999999


Q ss_pred             ceecCCCcccchhhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhcc
Q 039630          100 GCIDGPSRILAPLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEI  170 (174)
Q Consensus       100 ~~~~~~~~~lv~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  170 (174)
                      .+...+..++++  ++...+.+...+.....................+++.....++.|++.||.|||++.
T Consensus        86 ~~~~~~~~~lv~--e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~g  154 (314)
T cd05099          86 VCTQEGPLYVIV--EYAAKGNLREFLRARRPPGPDYTFDITKVPEEQLSFKDLVSCAYQVARGMEYLESRR  154 (314)
T ss_pred             EEccCCceEEEE--ecCCCCcHHHHHHhcCCCcccccccccCCcccccCHHHHHHHHHHHHHHHHHHHHCC
Confidence            998888888888  777777665544332111100000001112235788899999999999999999854

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>KOG4279 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.51  E-value=1.9e-14  Score=111.65  Aligned_cols=111  Identities=20%  Similarity=0.313  Sum_probs=93.3

Q ss_pred             ceecccCCeeEEEEE-EcCCCEEEEEEeeccCccchhHHHHHHHHHhcccccCCCeeeeecceecCCCcccchhhhhhhh
Q 039630           40 NKIGEGGFGSVYKGR-LEDGTVVAVNVLSVESKQGETEFMSEVASMANINICHENLVKLHGGCIDGPSRILAPLQASIEA  118 (174)
Q Consensus        40 ~~lg~G~~g~V~~~~-~~~~~~~avK~~~~~~~~~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~~~~~~~lv~~~~~~~~  118 (174)
                      -+||+|.||.||.|+ ..+....|+|.++.......+-+..|+.+.+.+.  |.||++++|.+...+..-+.|  +-.++
T Consensus       581 vVLGKGTYG~VYA~RD~~tqvrIaIKEIpekdsr~~QPLhEEIaLH~~Lr--HkNIVrYLGs~senGf~kIFM--EqVPG  656 (1226)
T KOG4279|consen  581 VVLGKGTYGTVYAARDMDTQVRIAIKEIPEKDSREVQPLHEEIALHSTLR--HKNIVRYLGSVSENGFFKIFM--EQVPG  656 (1226)
T ss_pred             EEeecCceeEEEeeccccceeEEEeeecccccchhhccHHHHHHHHHHHh--hHhHHHHhhccCCCCeEEEEe--ecCCC
Confidence            479999999999999 6677789999998777677778899999999999  999999999998888766666  77777


Q ss_pred             hhhhhhhhcccceeeeeeecCCCCCcccC--CHHHHHHHHHHHHHHHHHhhhc
Q 039630          119 LFLFTKLWKMDKFISIYVVSGSKKNRVKF--NWIARREIALGIARGLAYIHEE  169 (174)
Q Consensus       119 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~qi~~gl~yLH~~  169 (174)
                      +.|...+               +.+++++  .+..+..+.+||++||.|||++
T Consensus       657 GSLSsLL---------------rskWGPlKDNEstm~fYtkQILeGLkYLHen  694 (1226)
T KOG4279|consen  657 GSLSSLL---------------RSKWGPLKDNESTMNFYTKQILEGLKYLHEN  694 (1226)
T ss_pred             CcHHHHH---------------HhccCCCccchhHHHHHHHHHHHHhhhhhhc
Confidence            7776644               3456666  5777888999999999999985

>cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4

Probab=99.51  E-value=1.1e-13  Score=99.28  Aligned_cols=126  Identities=19%  Similarity=0.280  Sum_probs=94.1

Q ss_pred             CCeeecceecccCCeeEEEEEEc------CCCEEEEEEeeccCcc-chhHHHHHHHHHhcccccCCCeeeeecceecCCC
Q 039630           34 NGFRTSNKIGEGGFGSVYKGRLE------DGTVVAVNVLSVESKQ-GETEFMSEVASMANINICHENLVKLHGGCIDGPS  106 (174)
Q Consensus        34 ~~~~~~~~lg~G~~g~V~~~~~~------~~~~~avK~~~~~~~~-~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~~~~~  106 (174)
                      ++|.....||+|+||.||++...      +...+++|.+...... ....+.+|+.++++++  |+|++++++.+...+.
T Consensus         5 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~--h~~iv~~~~~~~~~~~   82 (275)
T cd05046           5 SNLQEITTLGRGEFGEVFLAKAKGIEEEGGETLVLVKALQKTKDENLQSEFRRELDMFRKLS--HKNVVRLLGLCREAEP   82 (275)
T ss_pred             HhceeeeeecccceeEEEEEEeccCCcCCCcceEEEEccCCccchHHHHHHHHHHHHHHhcC--CcceeeeEEEECCCCc
Confidence            56888899999999999999843      2457899988654332 4567899999999999  9999999999988888


Q ss_pred             cccchhhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhcc
Q 039630          107 RILAPLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEI  170 (174)
Q Consensus       107 ~~lv~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  170 (174)
                      .++++  ++.+.+.+...+......       ........+++..+..++.|++.||+|||++.
T Consensus        83 ~~lv~--e~~~~~~L~~~i~~~~~~-------~~~~~~~~l~~~~~~~~~~~l~~~l~~LH~~~  137 (275)
T cd05046          83 HYMIL--EYTDLGDLKQFLRATKSK-------DEKLKPPPLSTKQKVALCTQIALGMDHLSNAR  137 (275)
T ss_pred             ceEEE--EecCCCcHHHHHHhcccc-------cccccccCCCHHHHHHHHHHHHHHHHHhhhcC
Confidence            88888  666666665433211100       00011225789999999999999999999864

Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s

>PTZ00283 serine/threonine protein kinase; Provisional

Probab=99.51  E-value=1.4e-13  Score=106.73  Aligned_cols=127  Identities=19%  Similarity=0.209  Sum_probs=94.0

Q ss_pred             hHHhhcCCeeecceecccCCeeEEEEE-EcCCCEEEEEEeeccC--ccchhHHHHHHHHHhcccccCCCeeeeecceecC
Q 039630           28 ELKIATNGFRTSNKIGEGGFGSVYKGR-LEDGTVVAVNVLSVES--KQGETEFMSEVASMANINICHENLVKLHGGCIDG  104 (174)
Q Consensus        28 ~~~~~~~~~~~~~~lg~G~~g~V~~~~-~~~~~~~avK~~~~~~--~~~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~~~  104 (174)
                      ......++|.+.+.||+|+||.||++. ..+++.+|+|+++...  ......+.+|+.++..++  |+|++++...+...
T Consensus        26 ~~~~~~~rY~i~~~LG~G~fG~Vy~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~~~--h~~iv~~~~~~~~~  103 (496)
T PTZ00283         26 TAKEQAKKYWISRVLGSGATGTVLCAKRVSDGEPFAVKVVDMEGMSEADKNRAQAEVCCLLNCD--FFSIVKCHEDFAKK  103 (496)
T ss_pred             cccccCCCEEEEEEEecCCCEEEEEEEEcCCCCEEEEEEEecccCCHHHHHHHHHHHHHHhcCC--CCcEEEeecceecc
Confidence            344455789999999999999999998 5678999999997552  334456788999999998  99999998877543


Q ss_pred             CC--------cccchhhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhcc
Q 039630          105 PS--------RILAPLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEI  170 (174)
Q Consensus       105 ~~--------~~lv~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  170 (174)
                      +.        .++++  ++..++.|...+...            ......+++..+..++.|++.||.|||++.
T Consensus       104 ~~~~~~~~~~i~lV~--Ey~~~gsL~~~l~~~------------~~~~~~l~e~~~~~i~~qll~aL~~lH~~~  163 (496)
T PTZ00283        104 DPRNPENVLMIALVL--DYANAGDLRQEIKSR------------AKTNRTFREHEAGLLFIQVLLAVHHVHSKH  163 (496)
T ss_pred             cccCcccceEEEEEE--eCCCCCcHHHHHHHh------------hccCCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            32        23444  666666665433111            112235788899999999999999999753

>cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2

Probab=99.51  E-value=1.1e-13  Score=101.76  Aligned_cols=111  Identities=27%  Similarity=0.331  Sum_probs=84.8

Q ss_pred             ceecccCCeeEEEEE-EcCCCEEEEEEeeccC---ccchhHHHHHHH-HHhcccccCCCeeeeecceecCCCcccchhhh
Q 039630           40 NKIGEGGFGSVYKGR-LEDGTVVAVNVLSVES---KQGETEFMSEVA-SMANINICHENLVKLHGGCIDGPSRILAPLQA  114 (174)
Q Consensus        40 ~~lg~G~~g~V~~~~-~~~~~~~avK~~~~~~---~~~~~~~~~e~~-~l~~l~~~h~~i~~~~~~~~~~~~~~lv~~~~  114 (174)
                      +.||+|+||.||++. ..++..+|+|++....   ......+..|.. +++.++  |+||+++++.+...+..++++  +
T Consensus         1 ~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~--h~~iv~~~~~~~~~~~~~lv~--e   76 (321)
T cd05603           1 KVIGKGSFGKVLLAKRKSDGSFYAVKVLQKKTILKKKEQNHIMAERNVLLKNLK--HPFLVGLHYSFQTAEKLYFVL--D   76 (321)
T ss_pred             CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHHhCC--CCCccceeeEEEcCCEEEEEE--c
Confidence            468999999999999 4568899999997442   222334555554 577788  999999999999888888888  7


Q ss_pred             hhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhcc
Q 039630          115 SIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEI  170 (174)
Q Consensus       115 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  170 (174)
                      +.+++.+...+.                ....+++..+..++.||+.||.|||++.
T Consensus        77 ~~~~~~L~~~l~----------------~~~~~~~~~~~~~~~qi~~~L~~lH~~~  116 (321)
T cd05603          77 YVNGGELFFHLQ----------------RERCFLEPRARFYAAEVASAIGYLHSLN  116 (321)
T ss_pred             CCCCCCHHHHHH----------------HcCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            777776654331                1234678888889999999999999853

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1.

>cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2

Probab=99.51  E-value=9.6e-14  Score=100.09  Aligned_cols=132  Identities=21%  Similarity=0.230  Sum_probs=91.9

Q ss_pred             CeeecceecccCCeeEEEEEEc------CCCEEEEEEeeccCc-cchhHHHHHHHHHhcccccCCCeeeeecceecCCCc
Q 039630           35 GFRTSNKIGEGGFGSVYKGRLE------DGTVVAVNVLSVESK-QGETEFMSEVASMANINICHENLVKLHGGCIDGPSR  107 (174)
Q Consensus        35 ~~~~~~~lg~G~~g~V~~~~~~------~~~~~avK~~~~~~~-~~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~~~~~~  107 (174)
                      +|.+.+.||+|+||.||+|...      .+..+|+|.++.... .....+..|+.++..++  |+||+++++.+...+..
T Consensus         6 ~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~l~--h~~iv~~~~~~~~~~~~   83 (283)
T cd05091           6 TVRFMEELGEDRFGKVYKGHLFGTAPGEQTQAVAIKTLKDKAEGPLREEFKHEAMMRSRLQ--HPNIVCLLGVVTKEQPL   83 (283)
T ss_pred             HHHHHHHhCCCCCCeEEEEEEecCCCCCceeEEEEEEccCCCCHHHHHHHHHHHHHHhcCC--CCCcCeEEEEEcCCCce
Confidence            4667789999999999999842      246899999975432 23456888999999999  99999999999888887


Q ss_pred             ccchhhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhcc
Q 039630          108 ILAPLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEI  170 (174)
Q Consensus       108 ~lv~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  170 (174)
                      ++++  ++.....+...+.....................+++..+..++.|++.||+|||++.
T Consensus        84 ~~~~--e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ql~~aL~~lH~~g  144 (283)
T cd05091          84 SMIF--SYCSHSDLHEFLVMRSPHSDVGSTDDDKTVKSTLEPADFVHIVTQIAAGMEFLSSHH  144 (283)
T ss_pred             EEEE--EcCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHcC
Confidence            7777  555555544433211111100011111122345788888999999999999999754

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly

>cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases

Probab=99.51  E-value=9.3e-14  Score=100.87  Aligned_cols=130  Identities=23%  Similarity=0.326  Sum_probs=94.5

Q ss_pred             cCCeeecceecccCCeeEEEEEEcC---------------CCEEEEEEeecc-CccchhHHHHHHHHHhcccccCCCeee
Q 039630           33 TNGFRTSNKIGEGGFGSVYKGRLED---------------GTVVAVNVLSVE-SKQGETEFMSEVASMANINICHENLVK   96 (174)
Q Consensus        33 ~~~~~~~~~lg~G~~g~V~~~~~~~---------------~~~~avK~~~~~-~~~~~~~~~~e~~~l~~l~~~h~~i~~   96 (174)
                      .++|++.+.||+|+||.||.+....               ...+|+|.++.. .......+.+|+.++.+++  |+|+++
T Consensus         4 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~ei~~l~~l~--h~~i~~   81 (295)
T cd05097           4 RQQLRLKEKLGEGQFGEVHLCEAEGLAEFLGEGAPEFDGQPVLVAVKMLRADVTKTARNDFLKEIKIMSRLK--NPNIIR   81 (295)
T ss_pred             hHhCeehhccCCCCCceEEecccccchhhccccCcccCCCceEEEEEecCCCCCHHHHHHHHHHHHHHHhCC--CCCcCe
Confidence            4578889999999999999987321               235899998754 2233456889999999999  999999


Q ss_pred             eecceecCCCcccchhhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhcc
Q 039630           97 LHGGCIDGPSRILAPLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEI  170 (174)
Q Consensus        97 ~~~~~~~~~~~~lv~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  170 (174)
                      +++.+...+..++++  ++..++.+...+........    .........+++..++.++.|++.||+|||++.
T Consensus        82 ~~~~~~~~~~~~lv~--e~~~~~~L~~~l~~~~~~~~----~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~  149 (295)
T cd05097          82 LLGVCVSDDPLCMIT--EYMENGDLNQFLSQREIEST----FTHANNIPSVSIANLLYMAVQIASGMKYLASLN  149 (295)
T ss_pred             EEEEEcCCCccEEEE--ecCCCCcHHHHHHhcccccc----ccccccCCcccHHHHHHHHHHHHHHHHHHHhcC
Confidence            999999988888888  77777666554422110000    000111224678888999999999999999864

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including

>PLN00009 cyclin-dependent kinase A; Provisional

Probab=99.51  E-value=3e-13  Score=98.09  Aligned_cols=118  Identities=22%  Similarity=0.311  Sum_probs=90.9

Q ss_pred             CCeeecceecccCCeeEEEEE-EcCCCEEEEEEeeccCc--cchhHHHHHHHHHhcccccCCCeeeeecceecCCCcccc
Q 039630           34 NGFRTSNKIGEGGFGSVYKGR-LEDGTVVAVNVLSVESK--QGETEFMSEVASMANINICHENLVKLHGGCIDGPSRILA  110 (174)
Q Consensus        34 ~~~~~~~~lg~G~~g~V~~~~-~~~~~~~avK~~~~~~~--~~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~~~~~~~lv  110 (174)
                      ++|+..+.||+|.+|.||++. ..+++.+++|.+.....  .....+.+|+.+++.++  |+|++++++.+...+..+++
T Consensus         2 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~--h~~i~~~~~~~~~~~~~~lv   79 (294)
T PLN00009          2 DQYEKVEKIGEGTYGVVYKARDRVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQ--HGNIVRLQDVVHSEKRLYLV   79 (294)
T ss_pred             CceEEEEEecCCCCEEEEEEEecCCCcEEEEEehhhccccccchHHHHHHHHHHHhcc--CCCEeeEEEEEecCCeEEEE
Confidence            468888999999999999999 45788999999865422  23456788999999999  99999999999998888888


Q ss_pred             hhhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhcc
Q 039630          111 PLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEI  170 (174)
Q Consensus       111 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  170 (174)
                      +  ++.+. .+...+..              .....+++..+..++.||+.||+|||++.
T Consensus        80 ~--e~~~~-~l~~~~~~--------------~~~~~~~~~~~~~~~~qi~~aL~~LH~~~  122 (294)
T PLN00009         80 F--EYLDL-DLKKHMDS--------------SPDFAKNPRLIKTYLYQILRGIAYCHSHR  122 (294)
T ss_pred             E--ecccc-cHHHHHHh--------------CCCCCcCHHHHHHHHHHHHHHHHHHHhCC
Confidence            8  55432 33332211              11123567788889999999999999864

>cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor

Probab=99.51  E-value=1.4e-13  Score=99.04  Aligned_cols=131  Identities=22%  Similarity=0.329  Sum_probs=94.7

Q ss_pred             HhhcCCeeecceecccCCeeEEEEEEc------CCCEEEEEEeeccC-ccchhHHHHHHHHHhcccccCCCeeeeeccee
Q 039630           30 KIATNGFRTSNKIGEGGFGSVYKGRLE------DGTVVAVNVLSVES-KQGETEFMSEVASMANINICHENLVKLHGGCI  102 (174)
Q Consensus        30 ~~~~~~~~~~~~lg~G~~g~V~~~~~~------~~~~~avK~~~~~~-~~~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~  102 (174)
                      ...+++|+..+.||+|+||.||.+...      .+..+|+|.+.... ......+.+|+.+++.++  |+|++++++.+.
T Consensus         2 ~~~~~~~~~~~~ig~G~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~--~~~iv~~~~~~~   79 (277)
T cd05062           2 EVAREKITMSRELGQGSFGMVYEGIAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFN--CHHVVRLLGVVS   79 (277)
T ss_pred             cccHHHceeeeeeccccCCeEEEEEeccCCCCCceeEEEEEeccccCCHHHHHHHHHHHHHHHhCC--CCCeeeEEEEEc
Confidence            345677999999999999999998732      24679999886432 233456889999999998  999999999998


Q ss_pred             cCCCcccchhhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhcc
Q 039630          103 DGPSRILAPLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEI  170 (174)
Q Consensus       103 ~~~~~~lv~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  170 (174)
                      .....++++  ++.+++.+...+........      .......+++..+..++.|++.||.|||++.
T Consensus        80 ~~~~~~lv~--e~~~~~~L~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~  139 (277)
T cd05062          80 QGQPTLVIM--ELMTRGDLKSYLRSLRPEME------NNPVQAPPSLKKMIQMAGEIADGMAYLNANK  139 (277)
T ss_pred             CCCCeEEEE--ecCCCCCHHHHHHHcCcccc------ccccccCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            888888888  66666666543322111000      0001123577888899999999999999854

Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh

>cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer

Probab=99.51  E-value=1.7e-13  Score=97.03  Aligned_cols=112  Identities=28%  Similarity=0.422  Sum_probs=89.1

Q ss_pred             ceecccCCeeEEEEEEcCCCEEEEEEeeccC-ccchhHHHHHHHHHhcccccCCCeeeeecceecCCCcccchhhhhhhh
Q 039630           40 NKIGEGGFGSVYKGRLEDGTVVAVNVLSVES-KQGETEFMSEVASMANINICHENLVKLHGGCIDGPSRILAPLQASIEA  118 (174)
Q Consensus        40 ~~lg~G~~g~V~~~~~~~~~~~avK~~~~~~-~~~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~~~~~~~lv~~~~~~~~  118 (174)
                      ++||+|+||.||++...++..+++|.+.... ......+.+|+.++..++  |+|++++++.+...+..++++  ++.+.
T Consensus         1 ~~ig~g~~g~vy~~~~~~~~~~a~K~~~~~~~~~~~~~~~~e~~~l~~l~--h~~i~~~~~~~~~~~~~~lv~--e~~~~   76 (250)
T cd05085           1 ELLGKGNFGEVFKGTLKDKTPVAVKTCKEDLPQELKIKFLSEARILKQYD--HPNIVKLIGVCTQRQPIYIVM--ELVPG   76 (250)
T ss_pred             CccCCCCCceEEEEEecCCcEEEEEecCCcCCHHHHHHHHHHHHHHHhCC--CCCcCeEEEEEecCCccEEEE--ECCCC
Confidence            3689999999999997778899999987543 223446889999999998  999999999999888888888  66666


Q ss_pred             hhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhcc
Q 039630          119 LFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEI  170 (174)
Q Consensus       119 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  170 (174)
                      +.+...+.               .....+++..+..++.|++.+|.|||++.
T Consensus        77 ~~L~~~~~---------------~~~~~~~~~~~~~~~~~i~~~l~~lH~~~  113 (250)
T cd05085          77 GDFLSFLR---------------KKKDELKTKQLVKFALDAAAGMAYLESKN  113 (250)
T ss_pred             CcHHHHHH---------------hcCCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            66655331               11224678888999999999999999764

Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c

>cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4

Probab=99.51  E-value=1.8e-13  Score=97.55  Aligned_cols=116  Identities=26%  Similarity=0.342  Sum_probs=94.0

Q ss_pred             CeeecceecccCCeeEEEEE-EcCCCEEEEEEeeccCc--cchhHHHHHHHHHhcccccCCCeeeeecceecCCCcccch
Q 039630           35 GFRTSNKIGEGGFGSVYKGR-LEDGTVVAVNVLSVESK--QGETEFMSEVASMANINICHENLVKLHGGCIDGPSRILAP  111 (174)
Q Consensus        35 ~~~~~~~lg~G~~g~V~~~~-~~~~~~~avK~~~~~~~--~~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~~~~~~~lv~  111 (174)
                      +|...+.||+|+||.||++. ..++..+++|.++....  .....+..|+.+++.++  |+||+++++.+...+..++++
T Consensus         1 ~y~~~~~lg~G~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~l~--~~~i~~~~~~~~~~~~~~lv~   78 (264)
T cd06626           1 RWQRGNKIGGGTFGKVYTAVNLDTGELMAVKEIRIQDNDPKTIKEIADEMKVLELLK--HPNLVKYYGVEVHREKVYIFM   78 (264)
T ss_pred             CceeeeEeecCCCcEEEEEEECCCCcEEEEEEEECcccchHHHHHHHHHHHHHHhCC--CCChhheeeeEecCCEEEEEE
Confidence            36778999999999999998 45688999999986643  25677899999999999  999999999998888888888


Q ss_pred             hhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhcc
Q 039630          112 LQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEI  170 (174)
Q Consensus       112 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  170 (174)
                        ++.+++.+...+.                ....+++..+..++.|++.||.|||++.
T Consensus        79 --e~~~~~~L~~~~~----------------~~~~~~~~~~~~i~~~i~~~l~~lh~~~  119 (264)
T cd06626          79 --EYCSGGTLEELLE----------------HGRILDEHVIRVYTLQLLEGLAYLHSHG  119 (264)
T ss_pred             --ecCCCCcHHHHHh----------------hcCCCChHHHHHHHHHHHHHHHHHHHCC
Confidence              6666666655321                1223677888899999999999999865

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4

>KOG3653 consensus Transforming growth factor beta/activin receptor subfamily of serine/threonine kinases [Signal transduction mechanisms]

Probab=99.51  E-value=1.8e-14  Score=106.79  Aligned_cols=115  Identities=29%  Similarity=0.414  Sum_probs=91.9

Q ss_pred             CeeecceecccCCeeEEEEEEcCCCEEEEEEeeccCccchhHHHHHHHHHhcccccCCCeeeeecceecCC----Ccccc
Q 039630           35 GFRTSNKIGEGGFGSVYKGRLEDGTVVAVNVLSVESKQGETEFMSEVASMANINICHENLVKLHGGCIDGP----SRILA  110 (174)
Q Consensus        35 ~~~~~~~lg~G~~g~V~~~~~~~~~~~avK~~~~~~~~~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~~~~----~~~lv  110 (174)
                      .+...+.+|+|.||.||+|.+. ++.||||+++   ....+.+..|-+|..-..+.|+||+++++.-...+    ..++|
T Consensus       211 pl~l~eli~~Grfg~V~KaqL~-~~~VAVKifp---~~~kqs~~~Ek~Iy~lp~m~h~nIl~Fi~~ekr~t~~~~eywLV  286 (534)
T KOG3653|consen  211 PLQLLELIGRGRFGCVWKAQLD-NRLVAVKIFP---EQEKQSFQNEKNIYSLPGMKHENILQFIGAEKRGTADRMEYWLV  286 (534)
T ss_pred             chhhHHHhhcCccceeehhhcc-CceeEEEecC---HHHHHHHHhHHHHHhccCccchhHHHhhchhccCCccccceeEE
Confidence            4566789999999999999986 6899999997   45667788888877654445999999999887766    56666


Q ss_pred             hhhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhccCC
Q 039630          111 PLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEIKT  172 (174)
Q Consensus       111 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~~~  172 (174)
                      .  ++.+.+.|...+                 ....++|....+++..+++||+|||+..+.
T Consensus       287 t--~fh~kGsL~dyL-----------------~~ntisw~~~cria~SmarGLa~LHee~p~  329 (534)
T KOG3653|consen  287 T--EFHPKGSLCDYL-----------------KANTISWNSLCRIAESMARGLAHLHEELPR  329 (534)
T ss_pred             e--eeccCCcHHHHH-----------------HhccccHHHHHHHHHHHHHHHHHhcccCCc
Confidence            6  667777776644                 122479999999999999999999998763

>cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase)

Probab=99.51  E-value=1.9e-13  Score=98.44  Aligned_cols=127  Identities=20%  Similarity=0.247  Sum_probs=91.8

Q ss_pred             hcCCeeecceecccCCeeEEEEEEcC-----CCEEEEEEeecc-CccchhHHHHHHHHHhcccccCCCeeeeecceecC-
Q 039630           32 ATNGFRTSNKIGEGGFGSVYKGRLED-----GTVVAVNVLSVE-SKQGETEFMSEVASMANINICHENLVKLHGGCIDG-  104 (174)
Q Consensus        32 ~~~~~~~~~~lg~G~~g~V~~~~~~~-----~~~~avK~~~~~-~~~~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~~~-  104 (174)
                      ..++|...+.||+|+||.||+|....     +..+++|.++.. .......+.+|+.+++.++  |+|++++++.+... 
T Consensus         4 ~~~~~~~~~~i~~g~~g~V~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~e~~~l~~l~--h~ni~~~~~~~~~~~   81 (280)
T cd05043           4 SRDRVTLSDLLQEGTFGRIFYGILIDEKPGKEEEVFVKTVKDHASEIQVTLLLQESCLLYGLS--HQNILPILHVCIEDG   81 (280)
T ss_pred             chhheEEeeeecccCCceEEEEEEecCCCCceeEEEEEEccCCCCHHHHHHHHHHHHHHHhCC--CCCCCeEEEEEecCC
Confidence            45678899999999999999999544     678999988744 2334566889999999999  99999999987664 


Q ss_pred             CCcccchhhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhcc
Q 039630          105 PSRILAPLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEI  170 (174)
Q Consensus       105 ~~~~lv~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  170 (174)
                      ...++++  ++...+.+...+......        .......+++..++.++.|++.||+|||++.
T Consensus        82 ~~~~~~~--~~~~~~~L~~~l~~~~~~--------~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~  137 (280)
T cd05043          82 EPPFVLY--PYMNWGNLKLFLQQCRLG--------EANNPQALSTQQLVHMAIQIACGMSYLHKRG  137 (280)
T ss_pred             CCCEEEE--EcCCCCcHHHHHHhcccc--------ccccccCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            4455555  444445554433211000        0011235789999999999999999999864

Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It

>cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase

Probab=99.51  E-value=1.2e-13  Score=101.61  Aligned_cols=111  Identities=29%  Similarity=0.346  Sum_probs=84.8

Q ss_pred             ceecccCCeeEEEEE-EcCCCEEEEEEeeccC---ccchhHHHHHHH-HHhcccccCCCeeeeecceecCCCcccchhhh
Q 039630           40 NKIGEGGFGSVYKGR-LEDGTVVAVNVLSVES---KQGETEFMSEVA-SMANINICHENLVKLHGGCIDGPSRILAPLQA  114 (174)
Q Consensus        40 ~~lg~G~~g~V~~~~-~~~~~~~avK~~~~~~---~~~~~~~~~e~~-~l~~l~~~h~~i~~~~~~~~~~~~~~lv~~~~  114 (174)
                      +.||+|+||.||++. ..+++.+|+|++....   ......+..|.. +++.++  |+||+++++.+...+..++++  +
T Consensus         1 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~~l~--hp~iv~~~~~~~~~~~~~lv~--e   76 (323)
T cd05575           1 KVIGKGSFGKVLLAKHKADGKFYAVKVLQKKAILKKKEQKHIMAERNVLLKNVK--HPFLVGLHYSFQTADKLYFVL--D   76 (323)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhhCC--CCCCCCeeEEEEeCCEEEEEE--c
Confidence            468999999999999 4578999999997542   222334555554 457788  999999999999888888888  7


Q ss_pred             hhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhcc
Q 039630          115 SIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEI  170 (174)
Q Consensus       115 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  170 (174)
                      +..++.+...+.                ....+++..+..++.||+.||.|||++.
T Consensus        77 ~~~~g~L~~~l~----------------~~~~~~~~~~~~~~~qi~~~l~~lH~~g  116 (323)
T cd05575          77 YVNGGELFFHLQ----------------RERSFPEPRARFYAAEIASALGYLHSLN  116 (323)
T ss_pred             CCCCCCHHHHHH----------------hcCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            777776654331                1234788888899999999999999853

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr

>PTZ00036 glycogen synthase kinase; Provisional

Probab=99.51  E-value=2e-13  Score=104.43  Aligned_cols=118  Identities=21%  Similarity=0.287  Sum_probs=83.1

Q ss_pred             hcCCeeecceecccCCeeEEEEE-EcCCCEEEEEEeeccCccchhHHHHHHHHHhcccccCCCeeeeecceecCC-----
Q 039630           32 ATNGFRTSNKIGEGGFGSVYKGR-LEDGTVVAVNVLSVESKQGETEFMSEVASMANINICHENLVKLHGGCIDGP-----  105 (174)
Q Consensus        32 ~~~~~~~~~~lg~G~~g~V~~~~-~~~~~~~avK~~~~~~~~~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~~~~-----  105 (174)
                      ...+|.+.+.||+|+||.||+|. ..++..||+|.+...    .....+|+.+++.++  |+||+++.+.+....     
T Consensus        64 ~~~~y~~~~~LG~G~fg~Vy~~~~~~~~~~vAiK~i~~~----~~~~~~Ei~il~~l~--h~niv~l~~~~~~~~~~~~~  137 (440)
T PTZ00036         64 PNKSYKLGNIIGNGSFGVVYEAICIDTSEKVAIKKVLQD----PQYKNRELLIMKNLN--HINIIFLKDYYYTECFKKNE  137 (440)
T ss_pred             cCCeEEEeEEEEeCCCEEEEEEEECCCCCEEEEEEEecC----cchHHHHHHHHHhcC--CCCCcceeeeEeecccccCC
Confidence            34579999999999999999998 457889999988533    223457999999999  999999988764321     


Q ss_pred             ---CcccchhhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhcc
Q 039630          106 ---SRILAPLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEI  170 (174)
Q Consensus       106 ---~~~lv~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  170 (174)
                         ..++++  ++.+.. +...+.         .   .......+++..+..++.|++.||+|||++.
T Consensus       138 ~~~~l~lvm--E~~~~~-l~~~~~---------~---~~~~~~~l~~~~~~~~~~qi~~gL~yLH~~~  190 (440)
T PTZ00036        138 KNIFLNVVM--EFIPQT-VHKYMK---------H---YARNNHALPLFLVKLYSYQLCRALAYIHSKF  190 (440)
T ss_pred             CceEEEEEE--ecCCcc-HHHHHH---------H---HhhcCCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence               123444  444322 111110         0   0112345788899999999999999999854

>cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1

Probab=99.51  E-value=1.7e-13  Score=97.34  Aligned_cols=115  Identities=25%  Similarity=0.345  Sum_probs=91.3

Q ss_pred             eeecceecccCCeeEEEEEEc-CCCEEEEEEeeccC-----ccchhHHHHHHHHHhcccccCCCeeeeecceecCCCccc
Q 039630           36 FRTSNKIGEGGFGSVYKGRLE-DGTVVAVNVLSVES-----KQGETEFMSEVASMANINICHENLVKLHGGCIDGPSRIL  109 (174)
Q Consensus        36 ~~~~~~lg~G~~g~V~~~~~~-~~~~~avK~~~~~~-----~~~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~~~~~~~l  109 (174)
                      |+..+.||+|++|.||+|... ++..+++|.+....     .+....+.+|+.+++.++  |+|++++.+.+...+..++
T Consensus         2 ~~~~~~ig~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~e~~~l~~~~--h~~i~~~~~~~~~~~~~~l   79 (258)
T cd06632           2 WRKGELLGSGSFGSVYEGLNLDDGDFFAVKEVSLADDGQTGQEAVKQLEQEIALLSKLQ--HPNIVQYLGTEREEDNLYI   79 (258)
T ss_pred             ccccceeeecCCceEEEEEEcCCCcEEEEEEEEEccccccchHHHHHHHHHHHHHHhcC--CCCchheeeeEecCCeEEE
Confidence            556689999999999999954 78899999986542     223456889999999999  9999999999988888888


Q ss_pred             chhhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhcc
Q 039630          110 APLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEI  170 (174)
Q Consensus       110 v~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  170 (174)
                      ++  ++.++..+...+.                ....+++..+..++.|++.||+|||++.
T Consensus        80 v~--e~~~~~~L~~~~~----------------~~~~~~~~~~~~~~~~i~~~l~~lH~~~  122 (258)
T cd06632          80 FL--ELVPGGSLAKLLK----------------KYGSFPEPVIRLYTRQILLGLEYLHDRN  122 (258)
T ss_pred             EE--EecCCCcHHHHHH----------------hcCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            87  6666666554321                1124678888899999999999999764

Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops

>cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

Probab=99.51  E-value=1.6e-13  Score=97.84  Aligned_cols=117  Identities=20%  Similarity=0.333  Sum_probs=92.7

Q ss_pred             CCeeecceecccCCeeEEEEE-EcCCCEEEEEEeeccCc-----cchhHHHHHHHHHhcccccCCCeeeeecceecCCCc
Q 039630           34 NGFRTSNKIGEGGFGSVYKGR-LEDGTVVAVNVLSVESK-----QGETEFMSEVASMANINICHENLVKLHGGCIDGPSR  107 (174)
Q Consensus        34 ~~~~~~~~lg~G~~g~V~~~~-~~~~~~~avK~~~~~~~-----~~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~~~~~~  107 (174)
                      ++|...+.||+|++|.||.+. ..++..+++|.+.....     .....+.+|+.++++++  |+||+++++.+...+..
T Consensus         2 ~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~lk~~~~~~~~~~~~~~~~~~~~e~~~l~~l~--~~~i~~~~~~~~~~~~~   79 (263)
T cd06625           2 TNWRRGKLLGQGAFGRVYLCYDVDTGRELAVKQVPFDPDSPETKKEVNALECEIQLLKNLQ--HERIVQYYGCLRDDETL   79 (263)
T ss_pred             CcccccceecCCCceEEEEEEEcCCCcEEEEEEEeecccchhhHHHHHHHHHHHHHHHhCC--CCCeeeeEEEEccCCeE
Confidence            457888999999999999998 45688999999874421     12356888999999999  99999999999998888


Q ss_pred             ccchhhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhcc
Q 039630          108 ILAPLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEI  170 (174)
Q Consensus       108 ~lv~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  170 (174)
                      ++++  ++.+++.+...+.                ....+++.....++.|++.||.|||+..
T Consensus        80 ~~v~--e~~~~~~l~~~~~----------------~~~~~~~~~~~~~~~~l~~~l~~lH~~~  124 (263)
T cd06625          80 SIFM--EYMPGGSVKDQLK----------------AYGALTETVTRKYTRQILEGVEYLHSNM  124 (263)
T ss_pred             EEEE--EECCCCcHHHHHH----------------HhCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            8888  6666666554331                1123678888899999999999999753

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t

>cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2

Probab=99.50  E-value=1.8e-13  Score=97.17  Aligned_cols=116  Identities=24%  Similarity=0.334  Sum_probs=94.5

Q ss_pred             CCeeecceecccCCeeEEEEEEc-CCCEEEEEEeeccCccchhHHHHHHHHHhcccccCCCeeeeecceecCCCcccchh
Q 039630           34 NGFRTSNKIGEGGFGSVYKGRLE-DGTVVAVNVLSVESKQGETEFMSEVASMANINICHENLVKLHGGCIDGPSRILAPL  112 (174)
Q Consensus        34 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~~avK~~~~~~~~~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~~~~~~~lv~~  112 (174)
                      ++|...+.||+|+||.||++... ++..+++|.++....  ...+.+|+.+++.++  |+|++++.+.+......++++ 
T Consensus         3 ~~y~~~~~i~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~--~~~~~~e~~~~~~l~--~~~i~~~~~~~~~~~~~~l~~-   77 (256)
T cd06612           3 EVFDILEKLGEGSYGSVYKAIHKETGQVVAIKVVPVEED--LQEIIKEISILKQCD--SPYIVKYYGSYFKNTDLWIVM-   77 (256)
T ss_pred             ccchhhhhhcCCCCeEEEEEEEcCCCcEEEEEEeecHHH--HHHHHHHHHHHHhCC--CCcEeeeeeeeecCCcEEEEE-
Confidence            56888899999999999999954 478999999875432  678899999999998  999999999999988888888 


Q ss_pred             hhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhcc
Q 039630          113 QASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEI  170 (174)
Q Consensus       113 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  170 (174)
                       ++..++.+...+.               .....+++..+..++.|++.||.|||+..
T Consensus        78 -e~~~~~~L~~~l~---------------~~~~~l~~~~~~~~~~~l~~~l~~lh~~~  119 (256)
T cd06612          78 -EYCGAGSVSDIMK---------------ITNKTLTEEEIAAILYQTLKGLEYLHSNK  119 (256)
T ss_pred             -ecCCCCcHHHHHH---------------hCccCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence             6666666554321               11234788999999999999999999854

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a

>cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases

Probab=99.50  E-value=2e-13  Score=98.02  Aligned_cols=130  Identities=21%  Similarity=0.282  Sum_probs=95.7

Q ss_pred             hhcCCeeecceecccCCeeEEEEEEc------CCCEEEEEEeeccC-ccchhHHHHHHHHHhcccccCCCeeeeecceec
Q 039630           31 IATNGFRTSNKIGEGGFGSVYKGRLE------DGTVVAVNVLSVES-KQGETEFMSEVASMANINICHENLVKLHGGCID  103 (174)
Q Consensus        31 ~~~~~~~~~~~lg~G~~g~V~~~~~~------~~~~~avK~~~~~~-~~~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~~  103 (174)
                      +..++|.+.+.||+|+||.||++...      .+..+++|.+.... ......+.+|+.++..++  |+|++++++.+..
T Consensus         3 ~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~~~--~~~i~~~~~~~~~   80 (277)
T cd05032           3 LPREKITLIRELGQGSFGMVYEGLAKGVVKGEPETRVAIKTVNENASMRERIEFLNEASVMKEFN--CHHVVRLLGVVST   80 (277)
T ss_pred             cchHHeeEEeEecCCCCceEEEEEEeccCCCCcceeEEEEecCCccCHHHHHHHHHHHHHHHhCC--CCceeEEEEEEcC
Confidence            44567889999999999999998843      23689999986442 233456888999999998  9999999999999


Q ss_pred             CCCcccchhhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhcc
Q 039630          104 GPSRILAPLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEI  170 (174)
Q Consensus       104 ~~~~~lv~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  170 (174)
                      ....++++  ++...+.+...+........      .......+++..+..++.|++.||.|||++.
T Consensus        81 ~~~~~~v~--e~~~~~~L~~~l~~~~~~~~------~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~  139 (277)
T cd05032          81 GQPTLVVM--ELMAKGDLKSYLRSRRPEAE------NNPGLGPPTLQKFIQMAAEIADGMAYLAAKK  139 (277)
T ss_pred             CCCcEEEE--ecCCCCCHHHHHHhcccchh------hccCCCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            88888888  66666666554322110000      0011234678888999999999999999854

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological

>cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases

Probab=99.50  E-value=1.8e-13  Score=98.03  Aligned_cols=115  Identities=20%  Similarity=0.271  Sum_probs=90.6

Q ss_pred             eeecceecccCCeeEEEEE-EcCCCEEEEEEeeccCc---c-------chhHHHHHHHHHhcccccCCCeeeeecceecC
Q 039630           36 FRTSNKIGEGGFGSVYKGR-LEDGTVVAVNVLSVESK---Q-------GETEFMSEVASMANINICHENLVKLHGGCIDG  104 (174)
Q Consensus        36 ~~~~~~lg~G~~g~V~~~~-~~~~~~~avK~~~~~~~---~-------~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~~~  104 (174)
                      |...+.||.|+||.||+|. ..++..+|+|.++....   .       ..+.+..|+.+++.++  |+|++++++.+...
T Consensus         3 ~~~~~~lg~g~~~~vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~--h~~i~~~~~~~~~~   80 (272)
T cd06629           3 WVKGELIGKGTYGRVYLALNVTTGEMMAVKQVELPATIAGRHDSRQKDMVKALRSEIETLKDLD--HLNIVQYLGFETTE   80 (272)
T ss_pred             eeecceecccCceEEEEEeecCCCceeeeeeeechhhhhcccchHHHHHHHHHHHHHHHHHhcC--CCCcceEEEEeccC
Confidence            6677899999999999998 45688999999864311   1       1345778999999999  99999999999988


Q ss_pred             CCcccchhhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhcc
Q 039630          105 PSRILAPLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEI  170 (174)
Q Consensus       105 ~~~~lv~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  170 (174)
                      +..++++  ++..++.+...+.                ....+++..+..++.|++.||.|||++.
T Consensus        81 ~~~~lv~--e~~~~~~L~~~l~----------------~~~~l~~~~~~~~~~qi~~~l~~lH~~~  128 (272)
T cd06629          81 EYLSIFL--EYVPGGSIGSCLR----------------TYGRFEEQLVRFFTEQVLEGLAYLHSKG  128 (272)
T ss_pred             CceEEEE--ecCCCCcHHHHHh----------------hccCCCHHHHHHHHHHHHHHHHHHhhCC
Confidence            8888887  7776666655331                1134778888889999999999999864

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte

>KOG0589 consensus Serine/threonine protein kinase [General function prediction only]

Probab=99.50  E-value=4e-14  Score=105.39  Aligned_cols=118  Identities=17%  Similarity=0.244  Sum_probs=97.5

Q ss_pred             CCeeecceecccCCeeEEEEE-EcCCCEEEEEEeeccC--ccchhHHHHHHHHHhcccccCCCeeeeecceecCCC-ccc
Q 039630           34 NGFRTSNKIGEGGFGSVYKGR-LEDGTVVAVNVLSVES--KQGETEFMSEVASMANINICHENLVKLHGGCIDGPS-RIL  109 (174)
Q Consensus        34 ~~~~~~~~lg~G~~g~V~~~~-~~~~~~~avK~~~~~~--~~~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~~~~~-~~l  109 (174)
                      ++|..++.+|+|+||.++... ..++..+++|.+....  ...+....+|+.+++++.  ||||+.+.+.|...+. .++
T Consensus         4 ~~Ye~~~~iG~GafG~a~lvrhk~~~~~~vlK~I~l~~~t~~~r~~A~~E~~lis~~~--hP~iv~y~ds~~~~~~~l~I   81 (426)
T KOG0589|consen    4 DNYEVLRQVGRGAFGSALLVRHKSDDKLYVLKKINLEKLTEPERRSAIQEMDLLSKLL--HPNIVEYKDSFEEDGQLLCI   81 (426)
T ss_pred             chhhhhhhcCccccchhhhhhhccCCceEEEEEEeccccCchhhHHHHHHHHHHHhcc--CCCeeeeccchhcCCceEEE
Confidence            568889999999999999887 5667899999998764  344557899999999998  9999999999999888 777


Q ss_pred             chhhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhc
Q 039630          110 APLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEE  169 (174)
Q Consensus       110 v~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~  169 (174)
                      ++  +|.+++.+....-.              .+...+++..+..++.|++.|+.|||++
T Consensus        82 vm--~Y~eGg~l~~~i~~--------------~k~~~f~E~~i~~~~~Q~~~av~ylH~~  125 (426)
T KOG0589|consen   82 VM--EYCEGGDLAQLIKE--------------QKGVLFPEERILKWFVQILLAVNYLHEN  125 (426)
T ss_pred             EE--eecCCCCHHHHHHH--------------HhhccccHHHHHHHHHHHHHHHHHHHhh
Confidence            77  78888877764321              1234589999999999999999999964

>cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2

Probab=99.50  E-value=1.4e-13  Score=100.03  Aligned_cols=130  Identities=23%  Similarity=0.337  Sum_probs=95.5

Q ss_pred             hcCCeeecceecccCCeeEEEEEEc-----------------CCCEEEEEEeeccC-ccchhHHHHHHHHHhcccccCCC
Q 039630           32 ATNGFRTSNKIGEGGFGSVYKGRLE-----------------DGTVVAVNVLSVES-KQGETEFMSEVASMANINICHEN   93 (174)
Q Consensus        32 ~~~~~~~~~~lg~G~~g~V~~~~~~-----------------~~~~~avK~~~~~~-~~~~~~~~~e~~~l~~l~~~h~~   93 (174)
                      +.++|++.+.||+|+||.||.+...                 ++..+|+|.+.... ......+.+|+.++..++  |+|
T Consensus         3 ~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~E~~~l~~l~--~~~   80 (296)
T cd05095           3 PRKRLTFKEKLGEGQFGEVHLCEAEGMEKFMDKDFSLDVSGNQPVLVAVKMLREDANKNARNDFLKEIKIMSRLK--DPN   80 (296)
T ss_pred             ChhhceeeeeccCCCCCeEEecccccccccccccccccCCCCceeEEEEEeccccCCHHHHHHHHHHHHHHHhCC--CCC
Confidence            3456899999999999999987521                 23468999987542 233567889999999999  999


Q ss_pred             eeeeecceecCCCcccchhhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhcc
Q 039630           94 LVKLHGGCIDGPSRILAPLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEI  170 (174)
Q Consensus        94 i~~~~~~~~~~~~~~lv~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  170 (174)
                      ++++++.+...+..++++  ++..++.+...+........     ........+++..+..++.|++.||+|||+..
T Consensus        81 i~~~~~~~~~~~~~~lv~--e~~~~~~L~~~l~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~  150 (296)
T cd05095          81 IIRLLAVCITSDPLCMIT--EYMENGDLNQFLSRHEPQEA-----AEKADVVTISYSTLIFMATQIASGMKYLSSLN  150 (296)
T ss_pred             cceEEEEEecCCccEEEE--EeCCCCcHHHHHHhcCcccc-----cccccccccCHHHHHHHHHHHHHHHHHHHHCC
Confidence            999999999988888888  77766666554432211100     00112234778889999999999999999864

Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit

>cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases

Probab=99.50  E-value=9.2e-14  Score=100.35  Aligned_cols=118  Identities=18%  Similarity=0.228  Sum_probs=93.3

Q ss_pred             CeeecceecccCCeeEEEEEE-cCCCEEEEEEeeccC-ccchhHHHHHHHHHhcccccCCCeeeeecceecCCCcccchh
Q 039630           35 GFRTSNKIGEGGFGSVYKGRL-EDGTVVAVNVLSVES-KQGETEFMSEVASMANINICHENLVKLHGGCIDGPSRILAPL  112 (174)
Q Consensus        35 ~~~~~~~lg~G~~g~V~~~~~-~~~~~~avK~~~~~~-~~~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~~~~~~~lv~~  112 (174)
                      +|++.+.||+|+||.||++.. .++..+|+|.++... ......+.+|+.++..++  |+|++++++.+...+..++++ 
T Consensus         2 ~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~e~~~l~~~~--~~~i~~~~~~~~~~~~~~lv~-   78 (286)
T cd06622           2 EIEVLDELGKGNYGSVYKVLHRPTGVTMAMKEIRLELDESKFNQIIMELDILHKAV--SPYIVDFYGAFFIEGAVYMCM-   78 (286)
T ss_pred             hhhhhhhhcccCCeEEEEEEEcCCCcEEEEEEeecccCHHHHHHHHHHHHHHHhcC--CCcHHhhhhheecCCeEEEEE-
Confidence            577889999999999999994 478899999987542 233467889999999998  999999999999988888888 


Q ss_pred             hhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhc
Q 039630          113 QASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEE  169 (174)
Q Consensus       113 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~  169 (174)
                       ++.+++.+...+...             .....+++..+..++.|++.||.|||++
T Consensus        79 -e~~~~~~l~~~~~~~-------------~~~~~~~~~~~~~~~~~i~~~l~~LH~~  121 (286)
T cd06622          79 -EYMDAGSLDKLYAGG-------------VATEGIPEDVLRRITYAVVKGLKFLKEE  121 (286)
T ss_pred             -eecCCCCHHHHHHhc-------------cccCCCCHHHHHHHHHHHHHHHHHHHhc
Confidence             666666654322110             1123578999999999999999999964

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A

Probab=99.50  E-value=1.3e-13  Score=99.32  Aligned_cols=134  Identities=22%  Similarity=0.309  Sum_probs=97.9

Q ss_pred             hcCCeeecceecccCCeeEEEEEE------cCCCEEEEEEeeccCccchhHHHHHHHHHhcccccCCCeeeeecceecCC
Q 039630           32 ATNGFRTSNKIGEGGFGSVYKGRL------EDGTVVAVNVLSVESKQGETEFMSEVASMANINICHENLVKLHGGCIDGP  105 (174)
Q Consensus        32 ~~~~~~~~~~lg~G~~g~V~~~~~------~~~~~~avK~~~~~~~~~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~~~~  105 (174)
                      .++++...+.||+|+||.||++..      .++..+++|.++.........+.+|+.+++.++  |+||+++.+.+...+
T Consensus         3 ~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~--h~~i~~~~~~~~~~~   80 (280)
T cd05092           3 KRRDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTVLQ--HQHIVRFYGVCTEGR   80 (280)
T ss_pred             ChHhceeccccCCccCCeEEEeEEecCCCCCCceEEEEEecCcCCHHHHHHHHHHHHHHhcCC--CCCCceEEEEEecCC
Confidence            345788889999999999999863      235688999887655555678999999999999  999999999999888


Q ss_pred             CcccchhhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhcc
Q 039630          106 SRILAPLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEI  170 (174)
Q Consensus       106 ~~~lv~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  170 (174)
                      ..++++  ++..++.+...+...+..... ...........+++..+..++.|++.|++|||++.
T Consensus        81 ~~~lv~--e~~~~~~L~~~i~~~~~~~~~-~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~~  142 (280)
T cd05092          81 PLLMVF--EYMRHGDLNRFLRSHGPDAKI-LAGGEDVAPGQLTLGQMLAIASQIASGMVYLASLH  142 (280)
T ss_pred             ceEEEE--ecCCCCCHHHHHHhcCcchhh-hcccccCCccccCHHHHHHHHHHHHHHHHHHHHCC
Confidence            888888  666666665544322211100 00001112234788999999999999999999754

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory

>cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta

Probab=99.50  E-value=1.7e-13  Score=100.55  Aligned_cols=111  Identities=19%  Similarity=0.205  Sum_probs=86.3

Q ss_pred             ceecccCCeeEEEEE-EcCCCEEEEEEeeccC---ccchhHHHHHHHHHhcc-cccCCCeeeeecceecCCCcccchhhh
Q 039630           40 NKIGEGGFGSVYKGR-LEDGTVVAVNVLSVES---KQGETEFMSEVASMANI-NICHENLVKLHGGCIDGPSRILAPLQA  114 (174)
Q Consensus        40 ~~lg~G~~g~V~~~~-~~~~~~~avK~~~~~~---~~~~~~~~~e~~~l~~l-~~~h~~i~~~~~~~~~~~~~~lv~~~~  114 (174)
                      +.||+|+||.||++. ..++..+|+|+++...   .........|..++... +  |++++++++.+...+..++++  +
T Consensus         1 ~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~--~~~i~~~~~~~~~~~~~~lv~--E   76 (316)
T cd05620           1 KVLGKGSFGKVLLAELKGKGEYFAVKALKKDVVLIDDDVECTMVEKRVLALAWE--NPFLTHLYCTFQTKEHLFFVM--E   76 (316)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccC--CCCccCeeEEEEeCCEEEEEE--C
Confidence            468999999999999 4568899999997542   23344566777777654 6  999999999999988888888  7


Q ss_pred             hhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhcc
Q 039630          115 SIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEI  170 (174)
Q Consensus       115 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  170 (174)
                      +..++.+...+.                ....+++..+..++.|++.||+|||++.
T Consensus        77 ~~~~g~L~~~i~----------------~~~~~~~~~~~~~~~qi~~~l~~lH~~~  116 (316)
T cd05620          77 FLNGGDLMFHIQ----------------DKGRFDLYRATFYAAEIVCGLQFLHSKG  116 (316)
T ss_pred             CCCCCcHHHHHH----------------HcCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            776666655331                1234688888899999999999999864

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I

>cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases

Probab=99.50  E-value=2.1e-13  Score=98.42  Aligned_cols=116  Identities=22%  Similarity=0.282  Sum_probs=92.3

Q ss_pred             CeeecceecccCCeeEEEEE-EcCCCEEEEEEeeccC--ccchhHHHHHHHHHhcccccCCCeeeeecceecCCCcccch
Q 039630           35 GFRTSNKIGEGGFGSVYKGR-LEDGTVVAVNVLSVES--KQGETEFMSEVASMANINICHENLVKLHGGCIDGPSRILAP  111 (174)
Q Consensus        35 ~~~~~~~lg~G~~g~V~~~~-~~~~~~~avK~~~~~~--~~~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~~~~~~~lv~  111 (174)
                      +|+..+.||+|+||.||++. ..++..+++|.++...  ......+.+|+.+++.++  |+|++++.+.+...+..++++
T Consensus         2 ~y~~~~~i~~g~~~~v~~~~~~~~~~~v~vK~~~~~~~~~~~~~~~~~e~~~l~~l~--~~~i~~~~~~~~~~~~~~iv~   79 (288)
T cd07833           2 KYEVLGVVGEGAYGVVLKCRNKATGEIVAIKKFKESEDDEDVKKTALREVKVLRQLR--HENIVNLKEAFRRKGRLYLVF   79 (288)
T ss_pred             ceeEEEEecccCCeeEEEEEeCCCCcEEEEehhhhhcccccchhHHHHHHHHHHhcC--CCCeeehhheEEECCEEEEEE
Confidence            58888999999999999998 4468899999987542  233567899999999999  999999999999888888888


Q ss_pred             hhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhcc
Q 039630          112 LQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEI  170 (174)
Q Consensus       112 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  170 (174)
                        ++.+...+.. +.               .....+++..+..++.|++.||.|||++.
T Consensus        80 --e~~~~~~l~~-~~---------------~~~~~~~~~~~~~~~~~i~~~l~~LH~~~  120 (288)
T cd07833          80 --EYVERTLLEL-LE---------------ASPGGLPPDAVRSYIWQLLQAIAYCHSHN  120 (288)
T ss_pred             --ecCCCCHHHH-HH---------------hcCCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence              6665544332 11               11224788889999999999999999864

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning

>cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors

Probab=99.50  E-value=2.9e-13  Score=98.15  Aligned_cols=129  Identities=24%  Similarity=0.293  Sum_probs=94.6

Q ss_pred             cCCeeecceecccCCeeEEEEEEc-----------------CCCEEEEEEeeccC-ccchhHHHHHHHHHhcccccCCCe
Q 039630           33 TNGFRTSNKIGEGGFGSVYKGRLE-----------------DGTVVAVNVLSVES-KQGETEFMSEVASMANINICHENL   94 (174)
Q Consensus        33 ~~~~~~~~~lg~G~~g~V~~~~~~-----------------~~~~~avK~~~~~~-~~~~~~~~~e~~~l~~l~~~h~~i   94 (174)
                      .++|++.+.||+|+||.||++...                 .+..+++|.+.... ....+.+.+|+.++..++  |+|+
T Consensus         4 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~l~--~~~i   81 (296)
T cd05051           4 RQPLNFVEKLGEGQFGEVHLCEADGLQDFSEKAFAENDNADAPVLVAVKVLRPDASDNAREDFLKEVKILSRLS--DPNI   81 (296)
T ss_pred             hhhCcccccccCCCCccEEEEEeccCCcccccccccccccCCceeEEEEEecCccCHHHHHHHHHHHHHHHhcC--CCCE
Confidence            457888999999999999998732                 12468999987553 334567889999999999  9999


Q ss_pred             eeeecceecCCCcccchhhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhcc
Q 039630           95 VKLHGGCIDGPSRILAPLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEI  170 (174)
Q Consensus        95 ~~~~~~~~~~~~~~lv~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  170 (174)
                      +++++.+...+..++++  ++...+.+...+..........     ......+++..++.++.|++.||+|||+..
T Consensus        82 ~~~~~~~~~~~~~~lv~--e~~~~~~L~~~l~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~i~~al~~LH~~~  150 (296)
T cd05051          82 ARLLGVCTVDPPLCMIM--EYMENGDLNQFLQKHVAETSGL-----ACNSKSLSFSTLLYMATQIASGMRYLESLN  150 (296)
T ss_pred             eEEEEEEecCCCcEEEE--ecCCCCCHHHHHHhcccccccc-----cccCCCCCHHHHHHHHHHHHHHHHHHHHcC
Confidence            99999999888888888  6666665554332211100000     011235789999999999999999999864

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke

>cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8

Probab=99.50  E-value=2.4e-13  Score=96.47  Aligned_cols=118  Identities=16%  Similarity=0.214  Sum_probs=93.7

Q ss_pred             CeeecceecccCCeeEEEEE-EcCCCEEEEEEeeccC--ccchhHHHHHHHHHhcccccCCCeeeeecceecCCCcccch
Q 039630           35 GFRTSNKIGEGGFGSVYKGR-LEDGTVVAVNVLSVES--KQGETEFMSEVASMANINICHENLVKLHGGCIDGPSRILAP  111 (174)
Q Consensus        35 ~~~~~~~lg~G~~g~V~~~~-~~~~~~~avK~~~~~~--~~~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~~~~~~~lv~  111 (174)
                      +|...+.||+|+||.||++. ..++..+++|.+....  ......+.+|+.+++.++  |+|++++++.+...+..++++
T Consensus         1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~~~--~~~i~~~~~~~~~~~~~~lv~   78 (256)
T cd08220           1 KYEKIRVVGRGAFGIVHLCRRKADQKLVIIKQIPVEQMTKDERLAAQNECQVLKLLS--HPNIIEYYENFLEDKALMIVM   78 (256)
T ss_pred             CceEEEEecccCceEEEEEEEcCCCcEEEEEEEeccccccHHHHHHHHHHHHHhhCC--CCchhheeeeEecCCEEEEEE
Confidence            47788999999999999988 4578899999987542  334567889999999999  999999999998888888888


Q ss_pred             hhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhcc
Q 039630          112 LQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEI  170 (174)
Q Consensus       112 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  170 (174)
                        ++.+++.+...+..              .....+++..+..++.|++.||.|||++.
T Consensus        79 --e~~~~~~L~~~~~~--------------~~~~~~~~~~~~~~~~~i~~~l~~lh~~~  121 (256)
T cd08220          79 --EYAPGGTLAEYIQK--------------RCNSLLDEDTILHFFVQILLALHHVHTKL  121 (256)
T ss_pred             --ecCCCCCHHHHHHH--------------hcccCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence              66666665543311              11224688889999999999999999864

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with

>cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5

Probab=99.50  E-value=2e-13  Score=96.92  Aligned_cols=118  Identities=19%  Similarity=0.299  Sum_probs=93.9

Q ss_pred             CeeecceecccCCeeEEEEEE-cCCCEEEEEEeeccC--ccchhHHHHHHHHHhcccccCCCeeeeecceecCCCcccch
Q 039630           35 GFRTSNKIGEGGFGSVYKGRL-EDGTVVAVNVLSVES--KQGETEFMSEVASMANINICHENLVKLHGGCIDGPSRILAP  111 (174)
Q Consensus        35 ~~~~~~~lg~G~~g~V~~~~~-~~~~~~avK~~~~~~--~~~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~~~~~~~lv~  111 (174)
                      +|...+.||+|+||.||++.. .++..+++|.+....  ......+.+|+.+++.++  |+|++++++.+...+..++++
T Consensus         1 ~~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~~~--h~~i~~~~~~~~~~~~~~lv~   78 (257)
T cd08225           1 RYEIIKKIGEGSFGKIYLAKAKSDSEHCVIKEIDLTKMPVKEKEASKKEVILLAKMK--HPNIVTFFASFQENGRLFIVM   78 (257)
T ss_pred             CceEEEEecCCCcceEEEEEEcCCCceEEEEEeeHhhccchhhHHHHHHHHHHHhCC--CCChhhhhheeccCCeEEEEE
Confidence            467789999999999999994 467889999997542  234556789999999999  999999999999888888888


Q ss_pred             hhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhcc
Q 039630          112 LQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEI  170 (174)
Q Consensus       112 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  170 (174)
                        ++..+..+...+..              .....+++..+..++.|++.||+|||++.
T Consensus        79 --e~~~~~~L~~~~~~--------------~~~~~~~~~~~~~~~~~l~~~l~~lh~~~  121 (257)
T cd08225          79 --EYCDGGDLMKRINR--------------QRGVLFSEDQILSWFVQISLGLKHIHDRK  121 (257)
T ss_pred             --ecCCCCcHHHHHHh--------------ccCCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence              66666666553321              11224688899999999999999999854

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown.

>cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases

Probab=99.50  E-value=3.1e-13  Score=96.56  Aligned_cols=115  Identities=26%  Similarity=0.360  Sum_probs=89.5

Q ss_pred             eeecceecccCCeeEEEEE-EcCCCEEEEEEeeccCcc---------chhHHHHHHHHHhcccccCCCeeeeecceecCC
Q 039630           36 FRTSNKIGEGGFGSVYKGR-LEDGTVVAVNVLSVESKQ---------GETEFMSEVASMANINICHENLVKLHGGCIDGP  105 (174)
Q Consensus        36 ~~~~~~lg~G~~g~V~~~~-~~~~~~~avK~~~~~~~~---------~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~~~~  105 (174)
                      |.+...||.|++|.||.|. ..++..+++|.+......         ....+.+|+.++..++  |+|++++.+.+...+
T Consensus         2 ~~~~~~ig~g~~~~v~~a~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~--h~~i~~~~~~~~~~~   79 (267)
T cd06628           2 WIKGALIGSGSFGSVYLGMNASSGELMAVKQVELPSVSASSKDRKRSMLDALAREIALLKELQ--HENIVQYLGSSLDAD   79 (267)
T ss_pred             ccccceeecCCCeEEEEEEecCCCcEEEEEEecCCCcccchhHHHHHHHHHHHHHHHHHHhcC--CCCeeeEEEEEEeCC
Confidence            5567899999999999998 456789999988654221         1245788999999999  999999999999888


Q ss_pred             CcccchhhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhcc
Q 039630          106 SRILAPLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEI  170 (174)
Q Consensus       106 ~~~lv~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  170 (174)
                      ..++++  ++.+++.+...+.                ....+++..+..++.|++.||+|||++.
T Consensus        80 ~~~lv~--e~~~~~~L~~~l~----------------~~~~l~~~~~~~~~~~l~~~l~~lH~~~  126 (267)
T cd06628          80 HLNIFL--EYVPGGSVAALLN----------------NYGAFEETLVRNFVRQILKGLNYLHNRG  126 (267)
T ss_pred             ccEEEE--EecCCCCHHHHHH----------------hccCccHHHHHHHHHHHHHHHHHHHhcC
Confidence            888887  6666555544321                1224678888899999999999999764

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate

>cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes

Probab=99.50  E-value=3e-13  Score=96.39  Aligned_cols=119  Identities=24%  Similarity=0.304  Sum_probs=90.2

Q ss_pred             hcCCeeecceecccCCeeEEEEEEcCCCEEEEEEeeccCccchhHHHHHHHHHhcccccCCCeeeeecceecCCCcccch
Q 039630           32 ATNGFRTSNKIGEGGFGSVYKGRLEDGTVVAVNVLSVESKQGETEFMSEVASMANINICHENLVKLHGGCIDGPSRILAP  111 (174)
Q Consensus        32 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~avK~~~~~~~~~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~~~~~~~lv~  111 (174)
                      ...+|.+.+.||+|++|.||++....+..+++|.+.... .....+.+|+.+++.++  |+|++++++.+. .+..++++
T Consensus         4 ~~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~lK~~~~~~-~~~~~~~~E~~~l~~l~--h~~i~~~~~~~~-~~~~~~v~   79 (260)
T cd05069           4 PRESLRLDVKLGQGCFGEVWMGTWNGTTKVAIKTLKPGT-MMPEAFLQEAQIMKKLR--HDKLVPLYAVVS-EEPIYIVT   79 (260)
T ss_pred             ChHHeeeeeeecCcCCCeEEEEEEcCCceEEEEEcccCC-ccHHHHHHHHHHHHhCC--CCCeeeEEEEEc-CCCcEEEE
Confidence            345688889999999999999987666679999886432 33457889999999999  999999998875 44566666


Q ss_pred             hhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhcc
Q 039630          112 LQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEI  170 (174)
Q Consensus       112 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  170 (174)
                        ++..++.+...+..              .....+++..+..++.|++.||.|||+..
T Consensus        80 --e~~~~~~L~~~~~~--------------~~~~~~~~~~~~~~~~~l~~al~~lH~~~  122 (260)
T cd05069          80 --EFMGKGSLLDFLKE--------------GDGKYLKLPQLVDMAAQIADGMAYIERMN  122 (260)
T ss_pred             --EcCCCCCHHHHHhh--------------CCCCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence              66666655543311              11224678888999999999999999854

Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an

>cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6

Probab=99.50  E-value=4.9e-13  Score=96.71  Aligned_cols=119  Identities=24%  Similarity=0.370  Sum_probs=81.8

Q ss_pred             CeeecceecccCCeeEEEEEE--cCCCEEEEEEeeccC--ccchhHHHHHHHHHhccc-ccCCCeeeeecceec-----C
Q 039630           35 GFRTSNKIGEGGFGSVYKGRL--EDGTVVAVNVLSVES--KQGETEFMSEVASMANIN-ICHENLVKLHGGCID-----G  104 (174)
Q Consensus        35 ~~~~~~~lg~G~~g~V~~~~~--~~~~~~avK~~~~~~--~~~~~~~~~e~~~l~~l~-~~h~~i~~~~~~~~~-----~  104 (174)
                      +|++.+.||+|+||.||++..  .++..+|+|.++...  ......+.+|+.+++.+. ..||||+++++.+..     .
T Consensus         2 ~Y~~~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~hpniv~~~~~~~~~~~~~~   81 (290)
T cd07862           2 QYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTDRE   81 (290)
T ss_pred             CcceeeEeccCCCeEEEEEEEcCCCCeEEEEEEEecccCCCCchHHHHHHHHHHHhhcccCCCCcceEEEEEecccCCCC
Confidence            588889999999999999984  346789999987542  222345667777776541 129999999998753     2


Q ss_pred             CCcccchhhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhcc
Q 039630          105 PSRILAPLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEI  170 (174)
Q Consensus       105 ~~~~lv~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  170 (174)
                      ...++++  ++... .+...+.              ......+++..+..++.|++.||.|||++.
T Consensus        82 ~~~~lv~--e~~~~-~l~~~~~--------------~~~~~~~~~~~~~~i~~qi~~aL~~lH~~~  130 (290)
T cd07862          82 TKLTLVF--EHVDQ-DLTTYLD--------------KVPEPGVPTETIKDMMFQLLRGLDFLHSHR  130 (290)
T ss_pred             CcEEEEE--ccCCC-CHHHHHH--------------hCCCCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            3455666  44432 2222211              011224788889999999999999999864

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla

>cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases

Probab=99.49  E-value=2.7e-13  Score=97.08  Aligned_cols=121  Identities=27%  Similarity=0.391  Sum_probs=86.6

Q ss_pred             eeecceecccCCeeEEEEEEc-C---CCEEEEEEeeccC--ccchhHHHHHHHHHhcccccCCCeeeeecceecCCC---
Q 039630           36 FRTSNKIGEGGFGSVYKGRLE-D---GTVVAVNVLSVES--KQGETEFMSEVASMANINICHENLVKLHGGCIDGPS---  106 (174)
Q Consensus        36 ~~~~~~lg~G~~g~V~~~~~~-~---~~~~avK~~~~~~--~~~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~~~~~---  106 (174)
                      |.+.+.||+|+||.||.+... +   +..+|+|.++...  ......+.+|+.+++.++  |+|++++++.+...+.   
T Consensus         1 ~~~~~~lg~G~~g~v~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~--h~~iv~~~~~~~~~~~~~~   78 (273)
T cd05035           1 LKLGKILGEGEFGSVMEGQLSQDDGSQLKVAVKTMKLDIHTYSEIEEFLSEAACMKDFD--HPNVMKLIGVCFEASSLQK   78 (273)
T ss_pred             CccccccCcCCCceEEEEEEecCCCCcceEEEEEeccCcCCHHHHHHHHHHHHHHHhCC--CCCeeeEEeeeccCCcccc
Confidence            356689999999999999843 2   3679999997542  223457889999999999  9999999998876554   


Q ss_pred             ---cccchhhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhcc
Q 039630          107 ---RILAPLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEI  170 (174)
Q Consensus       107 ---~~lv~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  170 (174)
                         .++++  ++...+.+...+...          ........+++.....++.|++.||+|||++.
T Consensus        79 ~~~~~~v~--e~~~~~~l~~~l~~~----------~~~~~~~~~~~~~~~~~~~~i~~aL~~lH~~~  133 (273)
T cd05035          79 IPKPMVIL--PFMKHGDLHSFLLYS----------RLGGLPEKLPLQTLLKFMVDIALGMEYLSNRN  133 (273)
T ss_pred             CcccEEEE--eccCCCCHHHHHHHh----------hccCCcccCCHHHHHHHHHHHHHHHHHHHhCC
Confidence               45555  555555544322110          00112235788889999999999999999854

Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu

>cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase

Probab=99.49  E-value=3e-13  Score=98.07  Aligned_cols=121  Identities=18%  Similarity=0.197  Sum_probs=89.6

Q ss_pred             CeeecceecccCCeeEEEEE-EcCCCEEEEEEeeccC--ccchhHHHHHHHHHhcccccCCCeeeeecceecCCC-----
Q 039630           35 GFRTSNKIGEGGFGSVYKGR-LEDGTVVAVNVLSVES--KQGETEFMSEVASMANINICHENLVKLHGGCIDGPS-----  106 (174)
Q Consensus        35 ~~~~~~~lg~G~~g~V~~~~-~~~~~~~avK~~~~~~--~~~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~~~~~-----  106 (174)
                      +|+..+.||+|+||.||++. ..++..+++|.++...  ......+.+|+.++..+. .|+|++++++.+...+.     
T Consensus         2 ~y~~~~~lg~g~~g~vy~~~~~~~~~~v~lK~~~~~~~~~~~~~~~~~E~~~l~~l~-~~~~i~~~~~~~~~~~~~~~~~   80 (295)
T cd07837           2 AYEKLEKIGEGTYGKVYKARDKNTGKLVALKKTRLEMDEEGIPPTALREISLLQMLS-ESIYIVRLLDVEHVEEKNGKPS   80 (295)
T ss_pred             CceEeeEecccCCeEEEEEEECCCCcEEEEEeehhhccccCCchHHHHHHHHHHHcc-CCCCccceeeeEeecCCCCCce
Confidence            58888999999999999999 4578999999987542  223456788999999986 36999999999877665     


Q ss_pred             cccchhhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhcc
Q 039630          107 RILAPLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEI  170 (174)
Q Consensus       107 ~~lv~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  170 (174)
                      .++++  ++.+. .+...+...           .......+++..++.++.||+.||.|||++.
T Consensus        81 ~~lv~--e~~~~-~l~~~~~~~-----------~~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~  130 (295)
T cd07837          81 LYLVF--EYLDS-DLKKFMDSN-----------GRGPGRPLPAKTIKSFMYQLLKGVAHCHKHG  130 (295)
T ss_pred             EEEEe--eccCc-CHHHHHHHh-----------cccCCCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            56777  55543 333322110           0111235789999999999999999999864

Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm

>PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity

Probab=99.49  E-value=6.3e-14  Score=99.61  Aligned_cols=114  Identities=26%  Similarity=0.382  Sum_probs=90.7

Q ss_pred             eeecceecccCCeeEEEEE-EcCCCEEEEEEeeccCccch--hHHHHHHHHHhcccccCCCeeeeecceecCCCcccchh
Q 039630           36 FRTSNKIGEGGFGSVYKGR-LEDGTVVAVNVLSVESKQGE--TEFMSEVASMANINICHENLVKLHGGCIDGPSRILAPL  112 (174)
Q Consensus        36 ~~~~~~lg~G~~g~V~~~~-~~~~~~~avK~~~~~~~~~~--~~~~~e~~~l~~l~~~h~~i~~~~~~~~~~~~~~lv~~  112 (174)
                      |+..+.||+|+||.||++. ..+++.+|+|++........  .....|+.++.+++  |+||+++.+.+...+..++++ 
T Consensus         1 y~~~~~lg~G~~g~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~~~~l~--~~~i~~~~~~~~~~~~~~~v~-   77 (260)
T PF00069_consen    1 YRLVKKLGSGGFGTVYKAKNKKNGQKVAVKIIDKSEIEEEEREENIREIKILRRLR--HPNIVQILDVFQDDNYLYIVM-   77 (260)
T ss_dssp             EEEEEEEEEESSEEEEEEEETTTTEEEEEEEEESTTHHHHHHHHHHHHHHHHHHHT--BTTBCHEEEEEEESSEEEEEE-
T ss_pred             CEEeEEEEeCCCEEEEEEEECCCCeEEEEEEeccccccccccchhhhhhhcccccc--ccccccccccccccccccccc-
Confidence            6788999999999999999 45567899999986643322  23456899999998  999999999999988888887 


Q ss_pred             hhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhc
Q 039630          113 QASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEE  169 (174)
Q Consensus       113 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~  169 (174)
                       ++...+.+...+.                ....+++..+..++.|++.||.+||++
T Consensus        78 -~~~~~~~L~~~l~----------------~~~~~~~~~~~~~~~qi~~~L~~Lh~~  117 (260)
T PF00069_consen   78 -EYCPGGSLQDYLQ----------------KNKPLSEEEILKIAYQILEALAYLHSK  117 (260)
T ss_dssp             -EEETTEBHHHHHH----------------HHSSBBHHHHHHHHHHHHHHHHHHHHT
T ss_pred             -ccccccccccccc----------------ccccccccccccccccccccccccccc
Confidence             6666665554331                223478899999999999999999985

Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A ....

>cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3

Probab=99.49  E-value=2e-13  Score=98.28  Aligned_cols=114  Identities=22%  Similarity=0.340  Sum_probs=91.8

Q ss_pred             eeecceecccCCeeEEEEE-EcCCCEEEEEEeeccC-ccchhHHHHHHHHHhcccccCCCeeeeecceecCCCcccchhh
Q 039630           36 FRTSNKIGEGGFGSVYKGR-LEDGTVVAVNVLSVES-KQGETEFMSEVASMANINICHENLVKLHGGCIDGPSRILAPLQ  113 (174)
Q Consensus        36 ~~~~~~lg~G~~g~V~~~~-~~~~~~~avK~~~~~~-~~~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~~~~~~~lv~~~  113 (174)
                      |...+.||+|+||.||++. ..++..+|+|.+.... ......+.+|+.++..++  |+|++++++.+...+..++++  
T Consensus         6 ~~~~~~ig~G~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~--h~~iv~~~~~~~~~~~~~lv~--   81 (277)
T cd06641           6 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCD--SPYVTKYYGSYLKDTKLWIIM--   81 (277)
T ss_pred             hhhheeEeecCCeEEEEEEECCCCcEEEEEEeccccchHHHHHHHHHHHHHHhcC--CCCEeEEEEEEEeCCeEEEEE--
Confidence            6677899999999999998 4568899999986442 334567888999999999  999999999999988888888  


Q ss_pred             hhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhcc
Q 039630          114 ASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEI  170 (174)
Q Consensus       114 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  170 (174)
                      ++.+++.+...+.                 ...+++..+..++.|++.|+.|||++.
T Consensus        82 e~~~~~~l~~~i~-----------------~~~~~~~~~~~~~~~l~~~l~~lh~~~  121 (277)
T cd06641          82 EYLGGGSALDLLE-----------------PGPLDETQIATILREILKGLDYLHSEK  121 (277)
T ss_pred             EeCCCCcHHHHHh-----------------cCCCCHHHHHHHHHHHHHHHHHHccCC
Confidence            6666666654321                 124678888999999999999999864

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int

>cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2

Probab=99.49  E-value=3e-13  Score=97.41  Aligned_cols=117  Identities=25%  Similarity=0.425  Sum_probs=88.6

Q ss_pred             CCeeecceecccCCeeEEEEEE-cCCC----EEEEEEeeccC-ccchhHHHHHHHHHhcccccCCCeeeeecceecCCCc
Q 039630           34 NGFRTSNKIGEGGFGSVYKGRL-EDGT----VVAVNVLSVES-KQGETEFMSEVASMANINICHENLVKLHGGCIDGPSR  107 (174)
Q Consensus        34 ~~~~~~~~lg~G~~g~V~~~~~-~~~~----~~avK~~~~~~-~~~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~~~~~~  107 (174)
                      ++|+..+.||+|+||.||+|.+ .++.    .||+|.++... ......+..|+.++..++  |+|++++++.+... ..
T Consensus         7 ~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~~~--~~~i~~~~~~~~~~-~~   83 (279)
T cd05109           7 TELKKVKVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAYVMAGVG--SPYVCRLLGICLTS-TV   83 (279)
T ss_pred             hheeeeeecCCCCCceEEEEEEecCCCccceEEEEEEecCCCCHHHHHHHHHHHHHHHhcC--CCCCceEEEEEcCC-Cc
Confidence            5688889999999999999984 4444    48999987542 333556888999999998  99999999988654 34


Q ss_pred             ccchhhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhcc
Q 039630          108 ILAPLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEI  170 (174)
Q Consensus       108 ~lv~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  170 (174)
                      ++++  ++.+.+.+...+.               .....+++..++.++.|++.||+|||++.
T Consensus        84 ~l~~--~~~~~g~l~~~l~---------------~~~~~~~~~~~~~~~~qi~~~L~~lH~~~  129 (279)
T cd05109          84 QLVT--QLMPYGCLLDYVR---------------ENKDRIGSQDLLNWCVQIAKGMSYLEEVR  129 (279)
T ss_pred             EEEE--EcCCCCCHHHHHh---------------hccCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            5555  6666666655331               11235788899999999999999999864

Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve

>cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12

Probab=99.49  E-value=3.8e-13  Score=97.80  Aligned_cols=118  Identities=25%  Similarity=0.377  Sum_probs=88.0

Q ss_pred             cCCeeecceecccCCeeEEEEEE-cCCCEEEEEEeeccC--ccchhHHHHHHHHHhcccccCCCeeeeecceecCC----
Q 039630           33 TNGFRTSNKIGEGGFGSVYKGRL-EDGTVVAVNVLSVES--KQGETEFMSEVASMANINICHENLVKLHGGCIDGP----  105 (174)
Q Consensus        33 ~~~~~~~~~lg~G~~g~V~~~~~-~~~~~~avK~~~~~~--~~~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~~~~----  105 (174)
                      .++|.+.+.||+|+||.||+|.. .+++.+++|.++...  ......+.+|+.+++.++  |+|++++++.+...+    
T Consensus         6 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~e~~~~~~l~--h~~i~~~~~~~~~~~~~~~   83 (302)
T cd07864           6 VDKFDIIGQIGEGTYGQVYKARDKDTGELVALKKVRLDNEKEGFPITAIREIKILRQLN--HRNIVNLKEIVTDKQDALD   83 (302)
T ss_pred             hhhhheeeeecccCCEEEEEEEECCCCcEEEEEEEeecccccCchHHHHHHHHHHHhCC--CCCeeeeeheecCcchhhh
Confidence            35688889999999999999994 568899999997542  223456778999999999  999999999987655    


Q ss_pred             ------CcccchhhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhcc
Q 039630          106 ------SRILAPLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEI  170 (174)
Q Consensus       106 ------~~~lv~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  170 (174)
                            ..++++  ++.++ .+...+               ......+++..+..++.|++.||+|||++.
T Consensus        84 ~~~~~~~~~lv~--e~~~~-~l~~~l---------------~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~  136 (302)
T cd07864          84 FKKDKGAFYLVF--EYMDH-DLMGLL---------------ESGLVHFSEDHIKSFMKQLLEGLNYCHKKN  136 (302)
T ss_pred             ccccCCcEEEEE--cccCc-cHHHHH---------------hcCCCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence                  445555  44433 222211               111234788999999999999999999753

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely

>cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins

Probab=99.49  E-value=3.6e-13  Score=98.33  Aligned_cols=117  Identities=23%  Similarity=0.355  Sum_probs=90.2

Q ss_pred             CCeeecceecccCCeeEEEEE-EcCCCEEEEEEeeccC---ccchhHHHHHHHHHhcccccCCCeeeeecceecCCCccc
Q 039630           34 NGFRTSNKIGEGGFGSVYKGR-LEDGTVVAVNVLSVES---KQGETEFMSEVASMANINICHENLVKLHGGCIDGPSRIL  109 (174)
Q Consensus        34 ~~~~~~~~lg~G~~g~V~~~~-~~~~~~~avK~~~~~~---~~~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~~~~~~~l  109 (174)
                      ..|...+.||+|+||.||++. ..+++.+++|.+....   ......+.+|+.+++.++  |+|++++.+.+...+..++
T Consensus        15 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~Ei~~l~~l~--h~niv~~~~~~~~~~~~~l   92 (307)
T cd06607          15 KLFTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQQLR--HPNTIEYKGCYLREHTAWL   92 (307)
T ss_pred             hhhhhheeecCCCCeEEEEEEEcCCCcEEEEEEEeccccCcHHHHHHHHHHHHHHHhCC--CCCEEEEEEEEEeCCeEEE
Confidence            458888999999999999998 4568899999986442   223456889999999999  9999999999999888888


Q ss_pred             chhhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhcc
Q 039630          110 APLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEI  170 (174)
Q Consensus       110 v~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  170 (174)
                      ++  ++..+ .+...+               ......+++..+..++.|++.||.|||++.
T Consensus        93 v~--e~~~g-~l~~~~---------------~~~~~~l~~~~~~~~~~ql~~~L~~LH~~~  135 (307)
T cd06607          93 VM--EYCLG-SASDIL---------------EVHKKPLQEVEIAAICHGALQGLAYLHSHE  135 (307)
T ss_pred             EH--HhhCC-CHHHHH---------------HHcccCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            88  54432 222211               011224788889999999999999999864

Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily

>cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2

Probab=99.49  E-value=9.2e-14  Score=103.05  Aligned_cols=94  Identities=22%  Similarity=0.327  Sum_probs=70.4

Q ss_pred             HHhhcCCeeecceecccCCeeEEEEEE------cCCCEEEEEEeeccC-ccchhHHHHHHHHHhcccccCCCeeeeecce
Q 039630           29 LKIATNGFRTSNKIGEGGFGSVYKGRL------EDGTVVAVNVLSVES-KQGETEFMSEVASMANINICHENLVKLHGGC  101 (174)
Q Consensus        29 ~~~~~~~~~~~~~lg~G~~g~V~~~~~------~~~~~~avK~~~~~~-~~~~~~~~~e~~~l~~l~~~h~~i~~~~~~~  101 (174)
                      |....++|++.+.||+|+||.||+|..      .+++.+|+|.++... ......+.+|+.++.++. .|+||+++++.+
T Consensus         2 ~~~~~~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~-~h~niv~~~~~~   80 (343)
T cd05103           2 WEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIG-HHLNVVNLLGAC   80 (343)
T ss_pred             cccchhHhcccccccCCccceEEEEeeccCCccccceeEEEEEeccCCChHHHHHHHHHHHHHHhcc-CCccHhhhccee
Confidence            444566799999999999999999972      346789999997542 233456889999999994 389999999988


Q ss_pred             ecCC-Ccccchhhhhhhhhhhhhhh
Q 039630          102 IDGP-SRILAPLQASIEALFLFTKL  125 (174)
Q Consensus       102 ~~~~-~~~lv~~~~~~~~~~l~~~~  125 (174)
                      ...+ ..++++  ++.+++.+...+
T Consensus        81 ~~~~~~~~lv~--ey~~~g~L~~~i  103 (343)
T cd05103          81 TKPGGPLMVIV--EFCKFGNLSNYL  103 (343)
T ss_pred             ecCCCceEEEE--eccCCCcHHHHH
Confidence            6554 445666  777766665443

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp

>cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase

Probab=99.49  E-value=3.1e-13  Score=97.24  Aligned_cols=125  Identities=24%  Similarity=0.331  Sum_probs=94.0

Q ss_pred             cCCeeecceecccCCeeEEEEEEc------CCCEEEEEEeeccC-ccchhHHHHHHHHHhcccccCCCeeeeecceecCC
Q 039630           33 TNGFRTSNKIGEGGFGSVYKGRLE------DGTVVAVNVLSVES-KQGETEFMSEVASMANINICHENLVKLHGGCIDGP  105 (174)
Q Consensus        33 ~~~~~~~~~lg~G~~g~V~~~~~~------~~~~~avK~~~~~~-~~~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~~~~  105 (174)
                      +++|.+.+.||+|+||.||++...      .+..+++|.++... ......+..|+.+++.++  |+|++++++.+...+
T Consensus         5 ~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~e~~~l~~l~--~~~i~~~~~~~~~~~   82 (277)
T cd05036           5 RDSITLLRALGHGAFGEVYEGLYRGRDGDAVELQVAVKTLPESCSEQDESDFLMEALIMSKFN--HQNIVRLIGVSFERL   82 (277)
T ss_pred             HHHcEeeeECCCCCCCcEEEEEEecCCCCCCceeEEEEEcCCCCCHHHHHHHHHHHHHHHhCC--CCCEeeEEEEEccCC
Confidence            356888899999999999999853      35688999886443 223456889999999999  999999999998888


Q ss_pred             CcccchhhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhcc
Q 039630          106 SRILAPLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEI  170 (174)
Q Consensus       106 ~~~lv~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  170 (174)
                      ..++++  ++..++.+...+.....         .......+++..++.++.||+.||.|||++.
T Consensus        83 ~~~lv~--e~~~g~~L~~~i~~~~~---------~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~  136 (277)
T cd05036          83 PRFILL--ELMAGGDLKSFLRENRP---------RPERPSSLTMKDLLFCARDVAKGCKYLEENH  136 (277)
T ss_pred             CcEEEE--ecCCCCCHHHHHHHhCC---------CCCCCCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            888887  66666655543321110         0111235789999999999999999999864

Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well

>cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase

Probab=99.49  E-value=2.2e-13  Score=97.60  Aligned_cols=121  Identities=23%  Similarity=0.316  Sum_probs=90.7

Q ss_pred             hcCCeeecceecccCCeeEEEEE-EcCCCEEEEEEeeccCccchhHHHHHHHHHhcccccCCCeeeeecceecCC-----
Q 039630           32 ATNGFRTSNKIGEGGFGSVYKGR-LEDGTVVAVNVLSVESKQGETEFMSEVASMANINICHENLVKLHGGCIDGP-----  105 (174)
Q Consensus        32 ~~~~~~~~~~lg~G~~g~V~~~~-~~~~~~~avK~~~~~~~~~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~~~~-----  105 (174)
                      +.+.|...+.||+|+||.||++. ..++..+|+|.+.... .....+..|+.++..+. .|+|++++.+.+...+     
T Consensus         4 ~~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~-~~~~~~~~e~~~l~~~~-~h~~i~~~~~~~~~~~~~~~~   81 (272)
T cd06637           4 PAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTG-DEEEEIKQEINMLKKYS-HHRNIATYYGAFIKKNPPGMD   81 (272)
T ss_pred             hhhhhhHHHheeecCCeEEEEEEEcCCCcEEEEEEEEcCC-ccHHHHHHHHHHHHHhc-CCCCeeeEeeEEeecCCCCCC
Confidence            45568888999999999999998 4568899999997543 34457888999998873 3999999999987542     


Q ss_pred             -CcccchhhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhcc
Q 039630          106 -SRILAPLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEI  170 (174)
Q Consensus       106 -~~~lv~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  170 (174)
                       ..++++  ++..++.+...+..              .....+++..+..++.|++.||+|||++.
T Consensus        82 ~~~~iv~--e~~~~~~L~~~l~~--------------~~~~~l~~~~~~~~~~qi~~~l~~LH~~~  131 (272)
T cd06637          82 DQLWLVM--EFCGAGSVTDLIKN--------------TKGNTLKEEWIAYICREILRGLSHLHQHK  131 (272)
T ss_pred             cEEEEEE--EcCCCCcHHHHHHh--------------ccCCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence             345566  66666555543311              11234788888999999999999999863

Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ

>cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1

Probab=99.49  E-value=2.3e-13  Score=98.26  Aligned_cols=118  Identities=28%  Similarity=0.373  Sum_probs=90.2

Q ss_pred             CCeeecceecccCCeeEEEEEE-----cCCCEEEEEEeeccC-ccchhHHHHHHHHHhcccccCCCeeeeecceecC--C
Q 039630           34 NGFRTSNKIGEGGFGSVYKGRL-----EDGTVVAVNVLSVES-KQGETEFMSEVASMANINICHENLVKLHGGCIDG--P  105 (174)
Q Consensus        34 ~~~~~~~~lg~G~~g~V~~~~~-----~~~~~~avK~~~~~~-~~~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~~~--~  105 (174)
                      +.|+..+.||+|+||.||.+..     .++..+++|.++... ......+.+|+.+++.+.  |+|++++.+.+...  .
T Consensus         4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~l~--h~~i~~~~~~~~~~~~~   81 (284)
T cd05079           4 RFLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLY--HENIVKYKGICTEDGGN   81 (284)
T ss_pred             hhhhhceecCCCCceeEEEEEEccCCCCccceEEEEEcCccccHHHHHHHHHHHHHHHhCC--CCCeeeeeeEEecCCCC
Confidence            3467789999999999999873     357789999987442 334567899999999999  99999999988775  3


Q ss_pred             CcccchhhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhcc
Q 039630          106 SRILAPLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEI  170 (174)
Q Consensus       106 ~~~lv~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  170 (174)
                      ..++++  ++.+++.+...+.               .....+++..+..++.|++.||+|||++.
T Consensus        82 ~~~lv~--e~~~g~~L~~~l~---------------~~~~~~~~~~~~~i~~~i~~aL~~lH~~g  129 (284)
T cd05079          82 GIKLIM--EFLPSGSLKEYLP---------------RNKNKINLKQQLKYAVQICKGMDYLGSRQ  129 (284)
T ss_pred             ceEEEE--EccCCCCHHHHHH---------------hccCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            455666  6666666654321               11124788889999999999999999864

Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a

>cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1

Probab=99.49  E-value=3.2e-13  Score=98.21  Aligned_cols=133  Identities=21%  Similarity=0.319  Sum_probs=93.9

Q ss_pred             CCeeecceecccCCeeEEEEEEc-CCC--EEEEEEeecc-CccchhHHHHHHHHHhcc-cccCCCeeeeecceecCCCcc
Q 039630           34 NGFRTSNKIGEGGFGSVYKGRLE-DGT--VVAVNVLSVE-SKQGETEFMSEVASMANI-NICHENLVKLHGGCIDGPSRI  108 (174)
Q Consensus        34 ~~~~~~~~lg~G~~g~V~~~~~~-~~~--~~avK~~~~~-~~~~~~~~~~e~~~l~~l-~~~h~~i~~~~~~~~~~~~~~  108 (174)
                      ++|.+.+.||+|+||.||++... ++.  .+++|.++.. .......+.+|+.++.++ +  |||++++++.+...+..+
T Consensus         2 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~E~~~l~~l~~--hp~iv~~~~~~~~~~~~~   79 (297)
T cd05089           2 EDIKFEDVIGEGNFGQVIRAMIKKDGLKMNAAIKMLKEFASENDHRDFAGELEVLCKLGH--HPNIINLLGACENRGYLY   79 (297)
T ss_pred             ccceeeeeecCCCcceEEEEEecCCCCcceeEEEEccccCCHHHHHHHHHHHHHHHhhcC--CCchhheEEEEccCCcce
Confidence            56888899999999999999853 333  4688887643 223455788899999888 6  999999999998888888


Q ss_pred             cchhhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhcc
Q 039630          109 LAPLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEI  170 (174)
Q Consensus       109 lv~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  170 (174)
                      +++  ++.+.+.+...+.....................+++..+..++.|++.||+|||++.
T Consensus        80 lv~--e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~lH~~~  139 (297)
T cd05089          80 IAI--EYAPYGNLLDFLRKSRVLETDPAFAKEHGTASTLTSQQLLQFASDVATGMQYLSEKQ  139 (297)
T ss_pred             EEE--EecCCCcHHHHHHhccccccccccccccCccCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            888  666666665544332211110000001112235788999999999999999999854

Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations.

>cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2

Probab=99.49  E-value=3.2e-13  Score=96.47  Aligned_cols=117  Identities=20%  Similarity=0.307  Sum_probs=88.4

Q ss_pred             CCeeecceecccCCeeEEEEE-EcCCCEEEEEEeeccC-----ccchhHHHHHHHHHhcccccCCCeeeeecceecCC--
Q 039630           34 NGFRTSNKIGEGGFGSVYKGR-LEDGTVVAVNVLSVES-----KQGETEFMSEVASMANINICHENLVKLHGGCIDGP--  105 (174)
Q Consensus        34 ~~~~~~~~lg~G~~g~V~~~~-~~~~~~~avK~~~~~~-----~~~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~~~~--  105 (174)
                      .+|++.+.||+|+||.||.+. ..++..+++|.+....     ......+.+|+.++..+.  |+|++++++.+....  
T Consensus         2 ~~~~~~~~l~~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~~~E~~~l~~l~--h~~i~~~~~~~~~~~~~   79 (265)
T cd06652           2 TNWRLGKLLGQGAFGRVYLCYDADTGRELAVKQVQFDPESPETSKEVNALECEIQLLKNLL--HERIVQYYGCLRDPMER   79 (265)
T ss_pred             CcceEeeEEecCCceEEEEEEEcCCCcEEEEEEeecCcCCcccHHHHHHHHHHHHHHHhcC--CCCeeeEEeEeccCCCc
Confidence            468889999999999999998 4568899999986431     122456788999999999  999999999886643  


Q ss_pred             CcccchhhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhcc
Q 039630          106 SRILAPLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEI  170 (174)
Q Consensus       106 ~~~lv~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  170 (174)
                      ..++++  ++.+++.+...+.                ....+++.....++.|++.||+|||++.
T Consensus        80 ~~~~v~--e~~~~~~L~~~l~----------------~~~~~~~~~~~~~~~~l~~~l~~lH~~~  126 (265)
T cd06652          80 TLSIFM--EHMPGGSIKDQLK----------------SYGALTENVTRKYTRQILEGVSYLHSNM  126 (265)
T ss_pred             eEEEEE--EecCCCcHHHHHH----------------HcCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            344555  6666665554321                1123677788899999999999999864

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re

>cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2

Probab=99.49  E-value=3.5e-13  Score=100.52  Aligned_cols=115  Identities=19%  Similarity=0.210  Sum_probs=85.9

Q ss_pred             cCCeeecceecccCCeeEEEEE-EcCCCEEEEEEeecc--CccchhHHHHHHHHHhcccccCCCeeeeecceecCCC---
Q 039630           33 TNGFRTSNKIGEGGFGSVYKGR-LEDGTVVAVNVLSVE--SKQGETEFMSEVASMANINICHENLVKLHGGCIDGPS---  106 (174)
Q Consensus        33 ~~~~~~~~~lg~G~~g~V~~~~-~~~~~~~avK~~~~~--~~~~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~~~~~---  106 (174)
                      .++|+..+.||+|+||.||++. ..++..+|+|.+...  .......+.+|+.++..++  |+||+++++.+.....   
T Consensus        20 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~--h~niv~~~~~~~~~~~~~~   97 (359)
T cd07876          20 LKRYQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAYRELVLLKCVN--HKNIISLLNVFTPQKSLEE   97 (359)
T ss_pred             hhceEEEEEeecCCCEEEEEEEEcCCCceeEEEEecccccchhHHHHHHHHHHHHHhCC--CCCEeeeeeeeccCCCccc
Confidence            3679999999999999999998 556889999999644  2334556789999999999  9999999998865432   


Q ss_pred             ---cccchhhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhcc
Q 039630          107 ---RILAPLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEI  170 (174)
Q Consensus       107 ---~~lv~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  170 (174)
                         .++++  ++.+.. +...+                  ...++...+..++.|++.||.|||++.
T Consensus        98 ~~~~~lv~--e~~~~~-l~~~~------------------~~~~~~~~~~~~~~qi~~~L~~LH~~~  143 (359)
T cd07876          98 FQDVYLVM--ELMDAN-LCQVI------------------HMELDHERMSYLLYQMLCGIKHLHSAG  143 (359)
T ss_pred             cceeEEEE--eCCCcC-HHHHH------------------hccCCHHHHHHHHHHHHHHHHHHHhCC
Confidence               34555  433322 11100                  113677788889999999999999864

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn

>cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases

Probab=99.49  E-value=2.2e-13  Score=97.83  Aligned_cols=115  Identities=23%  Similarity=0.280  Sum_probs=93.6

Q ss_pred             CeeecceecccCCeeEEEEE-EcCCCEEEEEEeeccC-ccchhHHHHHHHHHhcccccCCCeeeeecceecCCCcccchh
Q 039630           35 GFRTSNKIGEGGFGSVYKGR-LEDGTVVAVNVLSVES-KQGETEFMSEVASMANINICHENLVKLHGGCIDGPSRILAPL  112 (174)
Q Consensus        35 ~~~~~~~lg~G~~g~V~~~~-~~~~~~~avK~~~~~~-~~~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~~~~~~~lv~~  112 (174)
                      +|+..+.||.|++|.||++. ..++..+++|.+.... ......+.+|+.+++.++  |+|++++.+.+......++++ 
T Consensus         2 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~--h~~i~~~~~~~~~~~~~~~v~-   78 (274)
T cd06609           2 LFTLLECIGKGSFGEVYKAIDKRTNQVVAIKVIDLEEAEDEIEDIQQEIQFLSQCR--SPYITKYYGSFLKGSKLWIIM-   78 (274)
T ss_pred             hhhhhhhhcCCCCeEEEEEEECCCCeEEEEEEeeccccchHHHHHHHHHHHHHHcC--CCCeeeeeEEEEECCeEEEEE-
Confidence            57778899999999999999 4468899999997553 334567889999999999  999999999998888888888 


Q ss_pred             hhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhcc
Q 039630          113 QASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEI  170 (174)
Q Consensus       113 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  170 (174)
                       ++.+++.+...+.                 ...+++..+..++.|++.||.|||++.
T Consensus        79 -e~~~~~~L~~~~~-----------------~~~~~~~~~~~~~~ql~~~l~~lh~~~  118 (274)
T cd06609          79 -EYCGGGSCLDLLK-----------------PGKLDETYIAFILREVLLGLEYLHEEG  118 (274)
T ss_pred             -EeeCCCcHHHHHh-----------------hcCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence             6666666654321                 115788999999999999999999864

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN)

>cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases

Probab=99.49  E-value=3.5e-13  Score=98.72  Aligned_cols=118  Identities=21%  Similarity=0.219  Sum_probs=93.7

Q ss_pred             CeeecceecccCCeeEEEEEE-cCCCEEEEEEeeccCc---cchhHHHHHHHHHhcccccCCCeeeeecceecCCCcccc
Q 039630           35 GFRTSNKIGEGGFGSVYKGRL-EDGTVVAVNVLSVESK---QGETEFMSEVASMANINICHENLVKLHGGCIDGPSRILA  110 (174)
Q Consensus        35 ~~~~~~~lg~G~~g~V~~~~~-~~~~~~avK~~~~~~~---~~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~~~~~~~lv  110 (174)
                      +|...+.||+|++|.||.+.. .++..+++|.+.....   .....+..|+.++..++  |+||+++++.+......+++
T Consensus         2 ~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~--~~~i~~~~~~~~~~~~~~lv   79 (316)
T cd05574           2 HFKKIKLLGKGDVGRVFLVRLKGTGKLFALKVLDKKEMIKRNKVKRVLTEQEILATLD--HPFLPTLYASFQTETYLCLV   79 (316)
T ss_pred             ceEEeeeecCCccEEEEEEEEcCCCcEEEEEEEeccccchHHHHHHHHHHHHHHHhCC--CCCchhheeeeecCCEEEEE
Confidence            588889999999999999984 4588999999975532   23456888999999999  99999999999888888888


Q ss_pred             hhhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhcc
Q 039630          111 PLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEI  170 (174)
Q Consensus       111 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  170 (174)
                      +  ++..++.+...+.              ......+++.....++.|++.||+|||+..
T Consensus        80 ~--e~~~~~~L~~~~~--------------~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~  123 (316)
T cd05574          80 M--DYCPGGELFRLLQ--------------RQPGKCLSEEVARFYAAEVLLALEYLHLLG  123 (316)
T ss_pred             E--EecCCCCHHHHHH--------------hCCCCccCHHHHHHHHHHHHHHHHHHHHCC
Confidence            8  6666666554321              112235788888999999999999999864

Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin

>cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1

Probab=99.48  E-value=3.5e-13  Score=97.66  Aligned_cols=117  Identities=21%  Similarity=0.327  Sum_probs=89.2

Q ss_pred             CCeeecceecccCCeeEEEEEE-cCCCEEEEEEeeccCc--cchhHHHHHHHHHhcccccCCCeeeeecceecC--CCcc
Q 039630           34 NGFRTSNKIGEGGFGSVYKGRL-EDGTVVAVNVLSVESK--QGETEFMSEVASMANINICHENLVKLHGGCIDG--PSRI  108 (174)
Q Consensus        34 ~~~~~~~~lg~G~~g~V~~~~~-~~~~~~avK~~~~~~~--~~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~~~--~~~~  108 (174)
                      ++|+..+.||+|.||.||++.. .++..+++|.++....  .....+.+|+.++..++  |+|++++.+.+...  +..+
T Consensus         5 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~--h~ni~~~~~~~~~~~~~~~~   82 (293)
T cd07843           5 DEYEKLNRIEEGTYGVVYRARDKKTGEIVALKKLKMEKEKEGFPITSLREINILLKLQ--HPNIVTVKEVVVGSNLDKIY   82 (293)
T ss_pred             hhhhhhhhhcCCCCeEEEEEEECCCCcEEEEEEEeeccccccchhhHHHHHHHHHhcC--CCCEEEEEEEEEecCCCcEE
Confidence            4688889999999999999995 4688999999975532  22345678999999999  99999999998877  7777


Q ss_pred             cchhhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhcc
Q 039630          109 LAPLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEI  170 (174)
Q Consensus       109 lv~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  170 (174)
                      +++  ++... .+...+.               .....+++..+..++.|++.||+|||++.
T Consensus        83 lv~--e~~~~-~L~~~~~---------------~~~~~l~~~~~~~i~~qi~~aL~~LH~~~  126 (293)
T cd07843          83 MVM--EYVEH-DLKSLME---------------TMKQPFLQSEVKCLMLQLLSGVAHLHDNW  126 (293)
T ss_pred             EEe--hhcCc-CHHHHHH---------------hccCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            777  55442 3322110               11124788999999999999999999864

Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the

>cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7

Probab=99.48  E-value=3.4e-13  Score=97.15  Aligned_cols=111  Identities=18%  Similarity=0.193  Sum_probs=85.1

Q ss_pred             ecccCCeeEEEEE-EcCCCEEEEEEeeccCc---cchhHHHHHHHHHhcccccCCCeeeeecceecCCCcccchhhhhhh
Q 039630           42 IGEGGFGSVYKGR-LEDGTVVAVNVLSVESK---QGETEFMSEVASMANINICHENLVKLHGGCIDGPSRILAPLQASIE  117 (174)
Q Consensus        42 lg~G~~g~V~~~~-~~~~~~~avK~~~~~~~---~~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~~~~~~~lv~~~~~~~  117 (174)
                      ||+|+||.||++. ..+|..+|+|.+.....   ........|+.++..++  |+||+++.+.+......++++  ++..
T Consensus         1 lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~il~~l~--hp~i~~~~~~~~~~~~~~lv~--e~~~   76 (277)
T cd05607           1 LGKGGFGEVCAVQVKNTGKMYACKKLDKKRLKKKSGEKMALLEKEILEKVN--SPFIVNLAYAFESKTHLCLVM--SLMN   76 (277)
T ss_pred             CCCCCceEEEEEEEccCCcEEEEEEEcHHHhhcchhhHHHHHHHHHHHhcC--CCcEEEEEEEEecCCeEEEEE--ecCC
Confidence            6899999999998 55689999999964321   12334567999999999  999999999999888888888  6666


Q ss_pred             hhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhcc
Q 039630          118 ALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEI  170 (174)
Q Consensus       118 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  170 (174)
                      ++.+......              .....+++..+..++.|++.||+|||+..
T Consensus        77 g~~L~~~~~~--------------~~~~~~~~~~~~~~~~qi~~al~~lH~~~  115 (277)
T cd05607          77 GGDLKYHIYN--------------VGERGLEMERVIHYSAQITCGILHLHSMD  115 (277)
T ss_pred             CCCHHHHHHh--------------ccccCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            6665443211              11223678888899999999999999753

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr

>cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases

Probab=99.48  E-value=3.9e-13  Score=98.27  Aligned_cols=119  Identities=23%  Similarity=0.311  Sum_probs=88.6

Q ss_pred             eeecceecccCCeeEEEEEE-c--CCCEEEEEEeeccC---ccchhHHHHHHHHHhcccccCCCeeeeecceecC--CCc
Q 039630           36 FRTSNKIGEGGFGSVYKGRL-E--DGTVVAVNVLSVES---KQGETEFMSEVASMANINICHENLVKLHGGCIDG--PSR  107 (174)
Q Consensus        36 ~~~~~~lg~G~~g~V~~~~~-~--~~~~~avK~~~~~~---~~~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~~~--~~~  107 (174)
                      |.+.+.||+|+||.||++.. .  ++..+|+|.+....   ......+.+|+.++..++  |+|++++++.+...  +..
T Consensus         2 y~~~~~ig~g~~g~v~~~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~e~~~l~~l~--h~~i~~~~~~~~~~~~~~~   79 (316)
T cd07842           2 YEIEGCIGRGTYGRVYKAKRKNGKDGKEYAIKKFKGDKEQYTGISQSACREIALLRELK--HENVVSLVEVFLEHADKSV   79 (316)
T ss_pred             ceEEEEeccCCcEEEEEEEecCCCCCCeEEEEEeccccccccCccHHHHHHHHHHHhcC--CCCccceEEEEeCCCCceE
Confidence            67788999999999999994 3  57899999998632   344567788999999999  99999999999887  667


Q ss_pred             ccchhhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhcc
Q 039630          108 ILAPLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEI  170 (174)
Q Consensus       108 ~lv~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  170 (174)
                      ++++  ++.+.. +...+...           .......+++..+..++.|++.||.|||+..
T Consensus        80 ~lv~--e~~~~~-l~~~~~~~-----------~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~  128 (316)
T cd07842          80 YLLF--DYAEHD-LWQIIKFH-----------RQAKRVSIPPSMVKSLLWQILNGVHYLHSNW  128 (316)
T ss_pred             EEEE--eCCCcC-HHHHHHhh-----------ccCCCcCcCHHHHHHHHHHHHHHHHHHHhCC
Confidence            7777  544332 21111000           0111235788899999999999999999754

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the

>cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3

Probab=99.48  E-value=3.7e-13  Score=96.27  Aligned_cols=116  Identities=19%  Similarity=0.332  Sum_probs=87.8

Q ss_pred             CeeecceecccCCeeEEEEE-EcCCCEEEEEEeeccCc-----cchhHHHHHHHHHhcccccCCCeeeeecceecC--CC
Q 039630           35 GFRTSNKIGEGGFGSVYKGR-LEDGTVVAVNVLSVESK-----QGETEFMSEVASMANINICHENLVKLHGGCIDG--PS  106 (174)
Q Consensus        35 ~~~~~~~lg~G~~g~V~~~~-~~~~~~~avK~~~~~~~-----~~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~~~--~~  106 (174)
                      +|...+.||+|+||.||++. ..++..+++|.++....     .....+.+|+.+++.++  |+|++++++.+...  ..
T Consensus         3 ~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~e~~~l~~l~--h~~i~~~~~~~~~~~~~~   80 (266)
T cd06651           3 NWRRGKLLGQGAFGRVYLCYDVDTGRELAAKQVQFDPESPETSKEVSALECEIQLLKNLQ--HERIVQYYGCLRDRAEKT   80 (266)
T ss_pred             CccccceecCCCCEEEEEEEEcCCCcEEEEEEeecCcCCchhHHHHHHHHHHHHHHHHcC--CCCeeeEEEEEEcCCCCE
Confidence            57888999999999999998 45688999999864421     22446888999999999  99999999988654  33


Q ss_pred             cccchhhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhcc
Q 039630          107 RILAPLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEI  170 (174)
Q Consensus       107 ~~lv~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  170 (174)
                      .++++  ++.+++.+...+.                ....+++...+.++.|++.||+|||++.
T Consensus        81 ~~l~~--e~~~~~~L~~~l~----------------~~~~l~~~~~~~~~~qi~~~l~~LH~~~  126 (266)
T cd06651          81 LTIFM--EYMPGGSVKDQLK----------------AYGALTESVTRKYTRQILEGMSYLHSNM  126 (266)
T ss_pred             EEEEE--eCCCCCcHHHHHH----------------HcCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            44555  6665555544321                1123678888899999999999999754

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development

>cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3

Probab=99.48  E-value=4.2e-14  Score=100.73  Aligned_cols=112  Identities=25%  Similarity=0.349  Sum_probs=86.6

Q ss_pred             ceecccCCeeEEEEEEc-C-------CCEEEEEEeeccCccchhHHHHHHHHHhcccccCCCeeeeecceecCCCcccch
Q 039630           40 NKIGEGGFGSVYKGRLE-D-------GTVVAVNVLSVESKQGETEFMSEVASMANINICHENLVKLHGGCIDGPSRILAP  111 (174)
Q Consensus        40 ~~lg~G~~g~V~~~~~~-~-------~~~~avK~~~~~~~~~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~~~~~~~lv~  111 (174)
                      +.||+|+||.||++... .       ...+++|.+........+.+..|+.+++.++  |+|++++++.+...+..++++
T Consensus         1 ~~lg~G~~~~Vy~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~~~--h~~iv~~~~~~~~~~~~~lv~   78 (258)
T cd05078           1 ESLGQGTFTKIFKGIRREVGDYGELHKTEVLLKVLDKSHRNYSESFFEAASMMSQLS--HKHLVLNYGVCVCGDESIMVQ   78 (258)
T ss_pred             CCCCcccchhheeeeecccccccccccchhhHHhhcchhHHHHHHHHHHHHHHHhCC--CCChhheeeEEEeCCCcEEEE
Confidence            46899999999999842 2       2347888876554445567888999999998  999999999999888888888


Q ss_pred             hhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhcc
Q 039630          112 LQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEI  170 (174)
Q Consensus       112 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  170 (174)
                        ++...+.+...+.               .....+++...+.++.|++.||+|||++.
T Consensus        79 --e~~~~g~L~~~l~---------------~~~~~~~~~~~~~~~~qi~~~l~~lH~~~  120 (258)
T cd05078          79 --EYVKFGSLDTYLK---------------KNKNLINISWKLEVAKQLAWALHFLEDKG  120 (258)
T ss_pred             --ecCCCCcHHHHHh---------------cCCCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence              7777666655331               11224788888999999999999999854

Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity

>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional

Probab=99.48  E-value=2.4e-13  Score=112.92  Aligned_cols=112  Identities=31%  Similarity=0.485  Sum_probs=89.2

Q ss_pred             CCeeecceecccCCeeEEEEEE-cCCCEEEEEEeeccCccchhHHHHHHHHHhcccccCCCeeeeecceecCCCcccchh
Q 039630           34 NGFRTSNKIGEGGFGSVYKGRL-EDGTVVAVNVLSVESKQGETEFMSEVASMANINICHENLVKLHGGCIDGPSRILAPL  112 (174)
Q Consensus        34 ~~~~~~~~lg~G~~g~V~~~~~-~~~~~~avK~~~~~~~~~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~~~~~~~lv~~  112 (174)
                      ..+.....||+|+||.||+|.. .++..||+|.++....    ....|+.++++++  ||||+++++++...+..++|+ 
T Consensus       690 ~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~----~~~~~~~~l~~l~--HpnIv~~~~~~~~~~~~~lv~-  762 (968)
T PLN00113        690 SSLKEENVISRGKKGASYKGKSIKNGMQFVVKEINDVNS----IPSSEIADMGKLQ--HPNIVKLIGLCRSEKGAYLIH-  762 (968)
T ss_pred             hhCCcccEEccCCCeeEEEEEECCCCcEEEEEEccCCcc----ccHHHHHHHhhCC--CCCcceEEEEEEcCCCCEEEE-
Confidence            3466678999999999999994 6789999999864321    1234578899998  999999999999998888888 


Q ss_pred             hhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhccCC
Q 039630          113 QASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEIKT  172 (174)
Q Consensus       113 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~~~  172 (174)
                       |+.+++.+...+.                   .++|..+..++.|+|.||+|||+.+.+
T Consensus       763 -Ey~~~g~L~~~l~-------------------~l~~~~~~~i~~~ia~~L~yLH~~~~~  802 (968)
T PLN00113        763 -EYIEGKNLSEVLR-------------------NLSWERRRKIAIGIAKALRFLHCRCSP  802 (968)
T ss_pred             -eCCCCCcHHHHHh-------------------cCCHHHHHHHHHHHHHHHHHhccCCCC
Confidence             7777777765330                   267888899999999999999976443

>cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins

Probab=99.48  E-value=4.6e-13  Score=95.36  Aligned_cols=114  Identities=21%  Similarity=0.267  Sum_probs=94.3

Q ss_pred             CeeecceecccCCeeEEEEEE-cCCCEEEEEEeeccCc-cchhHHHHHHHHHhcccccCCCeeeeecceecCCCcccchh
Q 039630           35 GFRTSNKIGEGGFGSVYKGRL-EDGTVVAVNVLSVESK-QGETEFMSEVASMANINICHENLVKLHGGCIDGPSRILAPL  112 (174)
Q Consensus        35 ~~~~~~~lg~G~~g~V~~~~~-~~~~~~avK~~~~~~~-~~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~~~~~~~lv~~  112 (174)
                      +|+..+.||+|++|.||++.. .++..+++|.+..... .....+.+|+.++..++  |+|++++++.+...+..++++ 
T Consensus         2 ~~~~~~~i~~g~~~~v~~~~~~~~~~~~~vk~~~~~~~~~~~~~~~~e~~~l~~l~--~~~i~~~~~~~~~~~~~~lv~-   78 (264)
T cd06623           2 DLERVKVLGQGSSGVVYKVRHKPTGKIYALKKIHVDGDEEFRKQLLRELKTLRSCE--SPYVVKCYGAFYKEGEISIVL-   78 (264)
T ss_pred             cceeeeeeeecCCeEEEEEEEcCCCcEEEEEEeccCcchHHHHHHHHHHHHHHhcC--CCCeeeEEEEEccCCeEEEEE-
Confidence            578889999999999999994 4689999999976543 44667899999999999  999999999999988888888 


Q ss_pred             hhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhh
Q 039630          113 QASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHE  168 (174)
Q Consensus       113 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~  168 (174)
                       ++.+++.+...+.                ....+++.....++.|++.|++|||+
T Consensus        79 -e~~~~~~L~~~l~----------------~~~~l~~~~~~~~~~~l~~~l~~lh~  117 (264)
T cd06623          79 -EYMDGGSLADLLK----------------KVGKIPEPVLAYIARQILKGLDYLHT  117 (264)
T ss_pred             -EecCCCcHHHHHH----------------HcCCCCHHHHHHHHHHHHHHHHHHhc
Confidence             6666666655331                11357888999999999999999998

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of

>cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1

Probab=99.48  E-value=9.9e-14  Score=99.77  Aligned_cols=114  Identities=22%  Similarity=0.358  Sum_probs=91.9

Q ss_pred             eeecceecccCCeeEEEEE-EcCCCEEEEEEeeccC-ccchhHHHHHHHHHhcccccCCCeeeeecceecCCCcccchhh
Q 039630           36 FRTSNKIGEGGFGSVYKGR-LEDGTVVAVNVLSVES-KQGETEFMSEVASMANINICHENLVKLHGGCIDGPSRILAPLQ  113 (174)
Q Consensus        36 ~~~~~~lg~G~~g~V~~~~-~~~~~~~avK~~~~~~-~~~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~~~~~~~lv~~~  113 (174)
                      |...+.||+|+||.||+|. ..++..+++|.++... ......+.+|+.+++.++  |+|++++++.+...+..++++  
T Consensus         6 y~~~~~l~~g~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~--h~~i~~~~~~~~~~~~~~lv~--   81 (277)
T cd06642           6 FTKLERIGKGSFGEVYKGIDNRTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCD--SPYITRYYGSYLKGTKLWIIM--   81 (277)
T ss_pred             HHHHHHhcCCCCeeEEEEEEcCCCeEEEEEEeccccchHHHHHHHHHHHHHHcCC--CCccHhhhcccccCCceEEEE--
Confidence            5666889999999999998 4567889999987543 334567889999999999  999999999999988888888  


Q ss_pred             hhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhcc
Q 039630          114 ASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEI  170 (174)
Q Consensus       114 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  170 (174)
                      ++.+++.+...+.                 ...+++..+..++.|++.|+.|||++.
T Consensus        82 e~~~~~~L~~~~~-----------------~~~~~~~~~~~~~~~i~~~l~~lH~~~  121 (277)
T cd06642          82 EYLGGGSALDLLK-----------------PGPLEETYIATILREILKGLDYLHSER  121 (277)
T ss_pred             EccCCCcHHHHhh-----------------cCCCCHHHHHHHHHHHHHHHHHHhcCC
Confidence            7777666655321                 124678888899999999999999754

Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25

>PHA03209 serine/threonine kinase US3; Provisional

Probab=99.48  E-value=4.3e-13  Score=100.05  Aligned_cols=112  Identities=18%  Similarity=0.250  Sum_probs=86.1

Q ss_pred             cCCeeecceecccCCeeEEEEEE-cCCCEEEEEEeeccCccchhHHHHHHHHHhcccccCCCeeeeecceecCCCcccch
Q 039630           33 TNGFRTSNKIGEGGFGSVYKGRL-EDGTVVAVNVLSVESKQGETEFMSEVASMANINICHENLVKLHGGCIDGPSRILAP  111 (174)
Q Consensus        33 ~~~~~~~~~lg~G~~g~V~~~~~-~~~~~~avK~~~~~~~~~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~~~~~~~lv~  111 (174)
                      ..+|.+.+.||+|+||.||+|.. .++..||+|+....      ....|+.+++.++  |+||+++++.+...+..++++
T Consensus        65 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~valK~~~~~------~~~~E~~~l~~l~--h~~iv~~~~~~~~~~~~~lv~  136 (357)
T PHA03209         65 SLGYTVIKTLTPGSEGRVFVATKPGQPDPVVLKIGQKG------TTLIEAMLLQNVN--HPSVIRMKDTLVSGAITCMVL  136 (357)
T ss_pred             hcCcEEEEEecCCCCeEEEEEEECCCCceEEEEeCCcc------ccHHHHHHHHhCC--CCCCcChhheEEeCCeeEEEE
Confidence            35799999999999999999994 45778999975422      2356899999999  999999999999888887777


Q ss_pred             hhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhcc
Q 039630          112 LQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEI  170 (174)
Q Consensus       112 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  170 (174)
                        ++.. +.+...+.               .....+++..+..++.|++.||.|||++.
T Consensus       137 --e~~~-~~l~~~l~---------------~~~~~~~~~~~~~i~~qi~~aL~~LH~~~  177 (357)
T PHA03209        137 --PHYS-SDLYTYLT---------------KRSRPLPIDQALIIEKQILEGLRYLHAQR  177 (357)
T ss_pred             --EccC-CcHHHHHH---------------hccCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence              4332 22322221               12235789999999999999999999853

>cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa

Probab=99.48  E-value=4e-13  Score=95.73  Aligned_cols=110  Identities=24%  Similarity=0.324  Sum_probs=83.6

Q ss_pred             eecccCCeeEEEEEEc---CCCEEEEEEeeccC-ccchhHHHHHHHHHhcccccCCCeeeeecceecCCCcccchhhhhh
Q 039630           41 KIGEGGFGSVYKGRLE---DGTVVAVNVLSVES-KQGETEFMSEVASMANINICHENLVKLHGGCIDGPSRILAPLQASI  116 (174)
Q Consensus        41 ~lg~G~~g~V~~~~~~---~~~~~avK~~~~~~-~~~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~~~~~~~lv~~~~~~  116 (174)
                      .||+|+||.||+|.+.   .+..+|+|+++... ....+.+.+|+.+++.++  |+|++++++.+.. +..++++  ++.
T Consensus         2 ~ig~G~~g~v~~~~~~~~~~~~~vavk~~~~~~~~~~~~~~~~E~~~l~~l~--h~~ii~~~~~~~~-~~~~lv~--e~~   76 (257)
T cd05115           2 ELGSGNFGCVKKGVYKMRKKQIDVAIKVLKNENEKSVRDEMMREAEIMHQLD--NPYIVRMIGVCEA-EALMLVM--EMA   76 (257)
T ss_pred             ccCCCCcccEEEEEEecCCCceeEEEEEcccccChHHHHHHHHHHHHHHhcC--CCCeEEEEEEEcC-CCeEEEE--EeC
Confidence            3899999999998743   35579999997553 233456889999999999  9999999998754 4566666  666


Q ss_pred             hhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhcc
Q 039630          117 EALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEI  170 (174)
Q Consensus       117 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  170 (174)
                      +++.+...+.               .....+++..++.++.|++.||.|||++.
T Consensus        77 ~~~~L~~~l~---------------~~~~~~~~~~~~~~~~~i~~~l~~lH~~~  115 (257)
T cd05115          77 SGGPLNKFLS---------------GKKDEITVSNVVELMHQVSMGMKYLEGKN  115 (257)
T ss_pred             CCCCHHHHHH---------------hCCCCCCHHHHHHHHHHHHHHHHHHHhcC
Confidence            6666554321               12235788999999999999999999864

Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho

>cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases

Probab=99.48  E-value=2.9e-13  Score=97.91  Aligned_cols=120  Identities=24%  Similarity=0.295  Sum_probs=90.9

Q ss_pred             CeeecceecccCCeeEEEEEE-cCCCEEEEEEeeccC-ccchhHHHHHHHHHhcccccCCCeeeeecceecCC--Ccccc
Q 039630           35 GFRTSNKIGEGGFGSVYKGRL-EDGTVVAVNVLSVES-KQGETEFMSEVASMANINICHENLVKLHGGCIDGP--SRILA  110 (174)
Q Consensus        35 ~~~~~~~lg~G~~g~V~~~~~-~~~~~~avK~~~~~~-~~~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~~~~--~~~lv  110 (174)
                      +|...+.||.|++|.||.+.. .++..+++|.+.... ......+.+|+.+++.++  |+||+++++.+...+  ..+++
T Consensus         2 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~l~~l~--h~~iv~~~~~~~~~~~~~~~lv   79 (287)
T cd06621           2 KIVELSRLGEGAGGSVTKCRLKNTGMIFALKTITTDPNPDLQKQILRELEINKSCK--SPYIVKYYGAFLDESSSSIGIA   79 (287)
T ss_pred             ceEEEEEeccCCceEEEEEEECCCCeEEEEEEEecCCchHHHHHHHHHHHHHHhCC--CCCeeeeeeEEEccCCCeEEEE
Confidence            578889999999999999994 568899999997542 234566889999999999  999999999886543  45666


Q ss_pred             hhhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhcc
Q 039630          111 PLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEI  170 (174)
Q Consensus       111 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  170 (174)
                      +  ++.+++.+...+...            ......++...+..++.|++.||+|||+..
T Consensus        80 ~--e~~~~~~L~~~l~~~------------~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~  125 (287)
T cd06621          80 M--EYCEGGSLDSIYKKV------------KKRGGRIGEKVLGKIAESVLKGLSYLHSRK  125 (287)
T ss_pred             E--EecCCCCHHHHHHHH------------HhcCCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            6  666665554322110            112234788888999999999999999864

Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>KOG4250 consensus TANK binding protein kinase TBK1 [Signal transduction mechanisms]

Probab=99.48  E-value=4.9e-14  Score=108.88  Aligned_cols=117  Identities=25%  Similarity=0.328  Sum_probs=91.5

Q ss_pred             eeecceecccCCeeEEEEE-EcCCCEEEEEEeecc-CccchhHHHHHHHHHhcccccCCCeeeeecceecCC------Cc
Q 039630           36 FRTSNKIGEGGFGSVYKGR-LEDGTVVAVNVLSVE-SKQGETEFMSEVASMANINICHENLVKLHGGCIDGP------SR  107 (174)
Q Consensus        36 ~~~~~~lg~G~~g~V~~~~-~~~~~~~avK~~~~~-~~~~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~~~~------~~  107 (174)
                      ....+.||+|+||.||+++ ..+|..||||.+... ....++...+|+++|++++  |+|||++.+.-.+..      ..
T Consensus        15 W~~~e~LG~Ga~g~V~rgrnketG~~vAvK~~~~~~~~r~~e~~~~EieilkKLn--h~NIVk~f~iee~~~~~~~~~~~   92 (732)
T KOG4250|consen   15 WEMDERLGKGAFGNVYRGRNKETGRLVAVKTFNKESSLRPRERWCREIEILKKLN--HPNIVKLFDIEETKFLGLVTRLP   92 (732)
T ss_pred             eeehhhhcCCccceeeeecccccccchhHHhhhhhcccchHHHHHHHHHHHHHcC--chhhhhhcccCCccccCcccccc
Confidence            3455899999999999999 888999999999755 3456778999999999999  999999998876654      22


Q ss_pred             ccchhhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhc
Q 039630          108 ILAPLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEE  169 (174)
Q Consensus       108 ~lv~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~  169 (174)
                      .+++  +++.++.+...+.             ++.+..-+++..++.+..+++.||.|||.+
T Consensus        93 vlvm--EyC~gGsL~~~L~-------------~PEN~~GLpE~e~l~lL~d~~~al~~LrEn  139 (732)
T KOG4250|consen   93 VLVM--EYCSGGSLRKVLN-------------SPENAYGLPESEFLDLLSDLVSALRHLREN  139 (732)
T ss_pred             eEEE--eecCCCcHHHHhc-------------CcccccCCCHHHHHHHHHHHHHHHHHHHHc
Confidence            3333  5555555555332             234455689999999999999999999764

>cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases

Probab=99.48  E-value=4.8e-13  Score=94.77  Aligned_cols=112  Identities=29%  Similarity=0.441  Sum_probs=89.5

Q ss_pred             ceecccCCeeEEEEEEcCCCEEEEEEeeccCcc-chhHHHHHHHHHhcccccCCCeeeeecceecCCCcccchhhhhhhh
Q 039630           40 NKIGEGGFGSVYKGRLEDGTVVAVNVLSVESKQ-GETEFMSEVASMANINICHENLVKLHGGCIDGPSRILAPLQASIEA  118 (174)
Q Consensus        40 ~~lg~G~~g~V~~~~~~~~~~~avK~~~~~~~~-~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~~~~~~~lv~~~~~~~~  118 (174)
                      ++||+|+||.||++....++.+++|.++..... ....+..|+.+++.++  |+|++++++.+......++++  ++..+
T Consensus         1 ~~lg~g~~g~v~~~~~~~~~~v~~K~~~~~~~~~~~~~~~~e~~~l~~l~--~~~i~~~~~~~~~~~~~~~v~--e~~~~   76 (251)
T cd05041           1 EKIGKGNFGDVYKGVLKGNTEVAVKTCRSTLPPDLKRKFLQEAEILKQYD--HPNIVKLIGVCVQKQPIYIVM--ELVPG   76 (251)
T ss_pred             CccccCCCceEEEEEEeCCCcEEEEeccccCCHHHHHHHHHHHHHHHhCC--CCCeEEEEEEEecCCCeEEEE--EcCCC
Confidence            468999999999999655899999998765333 4567899999999999  999999999999988888888  66666


Q ss_pred             hhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhcc
Q 039630          119 LFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEI  170 (174)
Q Consensus       119 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  170 (174)
                      ..+...+.               .....+++..+..++.|++.|++|||++.
T Consensus        77 ~~l~~~l~---------------~~~~~~~~~~~~~~~~~~~~~l~~lH~~~  113 (251)
T cd05041          77 GSLLTFLR---------------KKKNRLTVKKLLQMSLDAAAGMEYLESKN  113 (251)
T ss_pred             CcHHHHHH---------------hcCCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            66554331               11224678888899999999999999764

Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k

>cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6

Probab=99.47  E-value=1.4e-13  Score=100.08  Aligned_cols=115  Identities=22%  Similarity=0.300  Sum_probs=91.9

Q ss_pred             CeeecceecccCCeeEEEEE-EcCCCEEEEEEeeccCccchhHHHHHHHHHhcccccCCCeeeeecceecCCCcccchhh
Q 039630           35 GFRTSNKIGEGGFGSVYKGR-LEDGTVVAVNVLSVESKQGETEFMSEVASMANINICHENLVKLHGGCIDGPSRILAPLQ  113 (174)
Q Consensus        35 ~~~~~~~lg~G~~g~V~~~~-~~~~~~~avK~~~~~~~~~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~~~~~~~lv~~~  113 (174)
                      .|.....||+|+||.||++. ..++..+++|.+..........+.+|+.++..++  |+|++++++.+...+..++++  
T Consensus        22 ~~~~~~~ig~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~--hp~i~~~~~~~~~~~~~~iv~--   97 (297)
T cd06659          22 LLENYIKIGEGSTGIVCIAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQ--HQNVVEMYKSYLVGEELWVLM--   97 (297)
T ss_pred             hHHhhhhcCCCCceeEEEEEEcCCCCEEEEEEEEecccchHHHHHHHHHHHHhCC--CCchhhhhhheeeCCeEEEEE--
Confidence            45555689999999999998 4568899999997654455667889999999999  999999999999888888888  


Q ss_pred             hhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhcc
Q 039630          114 ASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEI  170 (174)
Q Consensus       114 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  170 (174)
                      ++.+++.+....                 ....+++..+..++.|++.||+|||++.
T Consensus        98 e~~~~~~L~~~~-----------------~~~~~~~~~~~~~~~qi~~~L~~LH~~~  137 (297)
T cd06659          98 EFLQGGALTDIV-----------------SQTRLNEEQIATVCESVLQALCYLHSQG  137 (297)
T ss_pred             ecCCCCCHHHHH-----------------hhcCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            666665554421                 1124688889999999999999999764

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i

>KOG1290 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.47  E-value=5e-13  Score=99.71  Aligned_cols=120  Identities=18%  Similarity=0.225  Sum_probs=90.3

Q ss_pred             CCeeecceecccCCeeEEEEE-EcCCCEEEEEEeeccCccchhHHHHHHHHHhcccccC------CCeeeeecceecC--
Q 039630           34 NGFRTSNKIGEGGFGSVYKGR-LEDGTVVAVNVLSVESKQGETEFMSEVASMANINICH------ENLVKLHGGCIDG--  104 (174)
Q Consensus        34 ~~~~~~~~lg~G~~g~V~~~~-~~~~~~~avK~~~~~~~~~~~~~~~e~~~l~~l~~~h------~~i~~~~~~~~~~--  104 (174)
                      ++|.+.++||.|.|++||.|. .++.+.||+|+++.. ....+....||.+|+++....      ..||++++.|...  
T Consensus        78 gRY~v~rKLGWGHFSTVWLawDtq~~r~VAlKVvKSA-qhYtEaAlDEIklL~~v~~~Dp~~~~~~~VV~LlD~FkhsGp  156 (590)
T KOG1290|consen   78 GRYHVQRKLGWGHFSTVWLAWDTQNKRYVALKVVKSA-QHYTEAALDEIKLLQQVREGDPNDPGKKCVVQLLDHFKHSGP  156 (590)
T ss_pred             ceEEEEEeccccccceeEEEeeccCCeEEEEEEEehh-hHHHHHHHHHHHHHHHHHhcCCCCCCCceeeeeeccceecCC
Confidence            578999999999999999998 677889999999744 456677889999999875312      3499999998654  


Q ss_pred             --CCcccchhhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhccC
Q 039630          105 --PSRILAPLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEIK  171 (174)
Q Consensus       105 --~~~~lv~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~~  171 (174)
                        .+.++|++.-+...+.++..                 ....-++...+..|++||+.||+|||.++.
T Consensus       157 NG~HVCMVfEvLGdnLLklI~~-----------------s~YrGlpl~~VK~I~~qvL~GLdYLH~ecg  208 (590)
T KOG1290|consen  157 NGQHVCMVFEVLGDNLLKLIKY-----------------SNYRGLPLSCVKEICRQVLTGLDYLHRECG  208 (590)
T ss_pred             CCcEEEEEehhhhhHHHHHHHH-----------------hCCCCCcHHHHHHHHHHHHHHHHHHHHhcC
Confidence              44566663333333333331                 122347889999999999999999999875

>cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4

Probab=99.47  E-value=3e-13  Score=97.30  Aligned_cols=115  Identities=22%  Similarity=0.362  Sum_probs=92.7

Q ss_pred             CeeecceecccCCeeEEEEEE-cCCCEEEEEEeeccC-ccchhHHHHHHHHHhcccccCCCeeeeecceecCCCcccchh
Q 039630           35 GFRTSNKIGEGGFGSVYKGRL-EDGTVVAVNVLSVES-KQGETEFMSEVASMANINICHENLVKLHGGCIDGPSRILAPL  112 (174)
Q Consensus        35 ~~~~~~~lg~G~~g~V~~~~~-~~~~~~avK~~~~~~-~~~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~~~~~~~lv~~  112 (174)
                      .|...+.||.|+||.||.+.. .++..+|+|+++... ......+.+|+.+++.+.  |+|++++.+.+...+..++++ 
T Consensus         5 ~y~~~~~lg~g~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~--h~~i~~~~~~~~~~~~~~lv~-   81 (277)
T cd06640           5 LFTKLERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAEDEIEDIQQEITVLSQCD--SPYVTKYYGSYLKGTKLWIIM-   81 (277)
T ss_pred             hhhhhhhcccCCCeEEEEEEEccCCEEEEEEEEeccccHHHHHHHHHHHHHHHhCC--CCCEeeEEEEEEECCEEEEEE-
Confidence            466778999999999999984 568899999987553 334567889999999998  999999999999988888888 


Q ss_pred             hhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhcc
Q 039630          113 QASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEI  170 (174)
Q Consensus       113 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  170 (174)
                       ++.+++.+...+.                 ...+++..+..++.|++.||+|||++.
T Consensus        82 -e~~~~~~L~~~i~-----------------~~~l~~~~~~~~~~~l~~~l~~lh~~~  121 (277)
T cd06640          82 -EYLGGGSALDLLR-----------------AGPFDEFQIATMLKEILKGLDYLHSEK  121 (277)
T ss_pred             -ecCCCCcHHHHHh-----------------cCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence             7777766654321                 123677888889999999999999864

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter

>cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase

Probab=99.47  E-value=9.6e-13  Score=93.88  Aligned_cols=120  Identities=22%  Similarity=0.285  Sum_probs=94.7

Q ss_pred             CCeeecceecccCCeeEEEEE-EcCCCEEEEEEeeccC-ccchhHHHHHHHHHhcccccCCCeeeeecceecCCCcccch
Q 039630           34 NGFRTSNKIGEGGFGSVYKGR-LEDGTVVAVNVLSVES-KQGETEFMSEVASMANINICHENLVKLHGGCIDGPSRILAP  111 (174)
Q Consensus        34 ~~~~~~~~lg~G~~g~V~~~~-~~~~~~~avK~~~~~~-~~~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~~~~~~~lv~  111 (174)
                      ++|+..+.||.|+||.||++. ..++..+++|++.... ......+.+|+.+++.++  |+|++++.+.+...+..++++
T Consensus         1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~--~~~i~~~~~~~~~~~~~~iv~   78 (267)
T cd06610           1 DDYELIEVIGVGATAVVYAAICLPNNEKVAIKRIDLEKCQTSVDELRKEVQAMSQCN--HPNVVKYYTSFVVGDELWLVM   78 (267)
T ss_pred             CcceeeeeecCCCCeEEEEEEEcCCCcEEEEEEeccCCcchHHHHHHHHHHHHHhcC--CCCEEEEEEEEeeCCEEEEEE
Confidence            368888999999999999999 4567899999987542 235567899999999998  999999999998888888888


Q ss_pred             hhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhcc
Q 039630          112 LQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEI  170 (174)
Q Consensus       112 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  170 (174)
                        ++.+++.+...+...             .....+++..+..++.|++.||+|||++.
T Consensus        79 --e~~~~~~l~~~~~~~-------------~~~~~~~~~~~~~~~~ql~~al~~lh~~~  122 (267)
T cd06610          79 --PYLSGGSLLDIMKSS-------------YPRGGLDEAIIATVLKEVLKGLEYLHSNG  122 (267)
T ss_pred             --eccCCCcHHHHHHHh-------------cccCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence              666666655533110             01124788889999999999999999864

Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1

>cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases

Probab=99.47  E-value=9.4e-13  Score=94.87  Aligned_cols=115  Identities=24%  Similarity=0.340  Sum_probs=89.3

Q ss_pred             eeecceecccCCeeEEEEEE-cCCCEEEEEEeeccC--ccchhHHHHHHHHHhcccccCCCeeeeecceecC--CCcccc
Q 039630           36 FRTSNKIGEGGFGSVYKGRL-EDGTVVAVNVLSVES--KQGETEFMSEVASMANINICHENLVKLHGGCIDG--PSRILA  110 (174)
Q Consensus        36 ~~~~~~lg~G~~g~V~~~~~-~~~~~~avK~~~~~~--~~~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~~~--~~~~lv  110 (174)
                      |.+.+.||+|+||.||++.. .++..+++|.++...  ......+..|+.+++.++  |+|++++.+.+...  +..+++
T Consensus         1 y~~~~~l~~g~~~~vy~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l~--~~~i~~~~~~~~~~~~~~~~lv   78 (287)
T cd07840           1 YEKIAQIGEGTYGQVYKARNKKTGELVALKKIRMENEKEGFPITAIREIKLLQKLR--HPNIVRLKEIVTSKGKGSIYMV   78 (287)
T ss_pred             CeeeEEeccCCCeEEEEEEECCCCeEEEEEEEecccccccchHHHHHHHHHHHhcc--CCCeeeheeeEecCCCCcEEEE
Confidence            45678999999999999994 458899999998653  334566888999999999  99999999999887  677777


Q ss_pred             hhhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhcc
Q 039630          111 PLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEI  170 (174)
Q Consensus       111 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  170 (174)
                      +  ++.+. .+...+.               .....+++..++.++.|++.||+|||+..
T Consensus        79 ~--e~~~~-~l~~~~~---------------~~~~~~~~~~~~~i~~~i~~al~~LH~~~  120 (287)
T cd07840          79 F--EYMDH-DLTGLLD---------------SPEVKFTESQIKCYMKQLLEGLQYLHSNG  120 (287)
T ss_pred             e--ccccc-cHHHHHh---------------ccCCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            7  55543 3322110               11135788899999999999999999864

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po

>cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin

Probab=99.47  E-value=4.2e-13  Score=97.20  Aligned_cols=131  Identities=21%  Similarity=0.234  Sum_probs=95.7

Q ss_pred             echhhHHhhcCCeeecceecccCCeeEEEEE-EcCCCEEEEEEeeccCccchhHHHHHHHHHhcccccCCCeeeeeccee
Q 039630           24 ISYNELKIATNGFRTSNKIGEGGFGSVYKGR-LEDGTVVAVNVLSVESKQGETEFMSEVASMANINICHENLVKLHGGCI  102 (174)
Q Consensus        24 ~~~~~~~~~~~~~~~~~~lg~G~~g~V~~~~-~~~~~~~avK~~~~~~~~~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~  102 (174)
                      +....+..+.++|...+.||+|+||.||++. ..+++.+++|++... ......+..|+.++.++. .|+|++++++.+.
T Consensus        12 ~~~~~~~~~~~~y~~~~~l~~g~~~~vy~~~~~~~~~~~aik~~~~~-~~~~~~~~~e~~~l~~l~-~h~ni~~~~~~~~   89 (291)
T cd06639          12 LGLESLGDPTDTWEIIETIGKGTYGKVYKVTNKKDGSLAAVKILDPI-SDVDEEIEAEYNILQSLP-NHPNVVKFYGMFY   89 (291)
T ss_pred             hhcccCCCCCCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEeccc-ccHHHHHHHHHHHHHHhc-CCCCeEEEEEEEE
Confidence            4445556667889999999999999999998 467889999998643 223456778899998883 3999999999987


Q ss_pred             cCC-----CcccchhhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhcc
Q 039630          103 DGP-----SRILAPLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEI  170 (174)
Q Consensus       103 ~~~-----~~~lv~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  170 (174)
                      ..+     ..++++  ++.+++.+......            .......+++..+..++.|++.||.|||+..
T Consensus        90 ~~~~~~~~~~~lv~--ey~~~~sL~~~~~~------------~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~  148 (291)
T cd06639          90 KADKLVGGQLWLVL--ELCNGGSVTELVKG------------LLICGQRLDEAMISYILYGALLGLQHLHNNR  148 (291)
T ss_pred             eccccCCCeeEEEE--EECCCCcHHHHHHH------------hhhcCCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            543     356666  66655555432210            0112235788899999999999999999853

Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre

>cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9

Probab=99.47  E-value=8.2e-13  Score=96.28  Aligned_cols=117  Identities=26%  Similarity=0.373  Sum_probs=86.4

Q ss_pred             CCeeecceecccCCeeEEEEE-EcCCCEEEEEEeeccC--ccchhHHHHHHHHHhcccccCCCeeeeecceecCCCc---
Q 039630           34 NGFRTSNKIGEGGFGSVYKGR-LEDGTVVAVNVLSVES--KQGETEFMSEVASMANINICHENLVKLHGGCIDGPSR---  107 (174)
Q Consensus        34 ~~~~~~~~lg~G~~g~V~~~~-~~~~~~~avK~~~~~~--~~~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~~~~~~---  107 (174)
                      ++|...+.||+|+||.||++. ..++..+|+|.+....  ......+.+|+.+++.++  |+|++++++.+...+..   
T Consensus        12 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~~e~~~l~~l~--h~~iv~~~~~~~~~~~~~~~   89 (310)
T cd07865          12 SKYEKLAKIGQGTFGEVFKARHKKTKQIVALKKVLMENEKEGFPITALREIKILQLLK--HENVVNLIEICRTKATPYNR   89 (310)
T ss_pred             hheEEEEEeecCCCEEEEEEEECCCCcEEEEEEEeccCCcCCchhHHHHHHHHHHhCC--CCCccceEEEEecccccccC
Confidence            469999999999999999999 4568899999986442  222334568999999999  99999999988765433   


Q ss_pred             -----ccchhhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhcc
Q 039630          108 -----ILAPLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEI  170 (174)
Q Consensus       108 -----~lv~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  170 (174)
                           ++++  ++... .+...+               ......+++..+..++.|++.||.|||++.
T Consensus        90 ~~~~~~lv~--e~~~~-~l~~~l---------------~~~~~~~~~~~~~~i~~qi~~al~~lH~~~  139 (310)
T cd07865          90 YKGSFYLVF--EFCEH-DLAGLL---------------SNKNVKFTLSEIKKVMKMLLNGLYYIHRNK  139 (310)
T ss_pred             CCceEEEEE--cCCCc-CHHHHH---------------HhcccCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence                 5555  44332 222211               011224788999999999999999999864

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl

>cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3

Probab=99.47  E-value=4.1e-13  Score=96.77  Aligned_cols=117  Identities=25%  Similarity=0.358  Sum_probs=85.1

Q ss_pred             CCeeecceecccCCeeEEEEEE-cCCC----EEEEEEeeccC-ccchhHHHHHHHHHhcccccCCCeeeeecceecCCCc
Q 039630           34 NGFRTSNKIGEGGFGSVYKGRL-EDGT----VVAVNVLSVES-KQGETEFMSEVASMANINICHENLVKLHGGCIDGPSR  107 (174)
Q Consensus        34 ~~~~~~~~lg~G~~g~V~~~~~-~~~~----~~avK~~~~~~-~~~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~~~~~~  107 (174)
                      .+|+..+.||+|+||.||+|.+ .++.    .+++|.+.... ......+..|+.++..+.  |+||+++++.+.. +..
T Consensus         7 ~~~~~~~~lg~G~~~~vy~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l~--h~~iv~~~~~~~~-~~~   83 (279)
T cd05111           7 TELRKLKLLGSGVFGTVHKGIWIPEGDSIKIPVAIKTIQDRSGRQTFQEITDHMLAMGSLD--HAYIVRLLGICPG-ASL   83 (279)
T ss_pred             hhceeccccCccCCcceEEEEEcCCCCceeeEEEEeecccccchHHHHHHHHHHHHHhcCC--CCCcceEEEEECC-Ccc
Confidence            4678889999999999999984 3444    47777775332 223356777888888898  9999999998754 344


Q ss_pred             ccchhhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhcc
Q 039630          108 ILAPLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEI  170 (174)
Q Consensus       108 ~lv~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  170 (174)
                      ++++  ++..++.+...+.               .....+++..+..++.|++.||+|||++.
T Consensus        84 ~~i~--e~~~~gsL~~~l~---------------~~~~~~~~~~~~~i~~qi~~~l~~lH~~~  129 (279)
T cd05111          84 QLVT--QLSPLGSLLDHVR---------------QHRDSLDPQRLLNWCVQIAKGMYYLEEHR  129 (279)
T ss_pred             EEEE--EeCCCCcHHHHHH---------------hcccCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            5555  6666666655431               11234788899999999999999999854

Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r

>KOG0667 consensus Dual-specificity tyrosine-phosphorylation regulated kinase [General function prediction only]

Probab=99.46  E-value=7.6e-13  Score=101.42  Aligned_cols=117  Identities=19%  Similarity=0.208  Sum_probs=91.8

Q ss_pred             CeeecceecccCCeeEEEEE-EcCCCEEEEEEeeccCccchhHHHHHHHHHhcccc----cCCCeeeeecceecCCCccc
Q 039630           35 GFRTSNKIGEGGFGSVYKGR-LEDGTVVAVNVLSVESKQGETEFMSEVASMANINI----CHENLVKLHGGCIDGPSRIL  109 (174)
Q Consensus        35 ~~~~~~~lg~G~~g~V~~~~-~~~~~~~avK~~~~~~~~~~~~~~~e~~~l~~l~~----~h~~i~~~~~~~~~~~~~~l  109 (174)
                      .|.+.+.||+|+||.|.+|. ..+++.||+|+++.. +........|+.+|..++.    ..-|+|+++++|...++.++
T Consensus       187 rY~V~e~LGkGtFGQVvk~~d~~T~e~VAIKIiKN~-k~f~~Q~~~Ei~iL~~ln~~d~~~~~n~Vrm~d~F~fr~Hlci  265 (586)
T KOG0667|consen  187 RYEVLEVLGKGSFGQVVKAYDHKTGEIVAIKIIKNK-KRFLRQAQIEIRILELLNKHDPDDKYNIVRMLDYFYFRNHLCI  265 (586)
T ss_pred             EEEEEEEecccccceeEEEEecCCCcEEEEEeeccC-hHHHHHHHHHHHHHHHHhccCCCCCeeEEEeeeccccccceee
Confidence            68899999999999999999 678999999999854 4445566788998888751    23579999999999999999


Q ss_pred             chhhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhc
Q 039630          110 APLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEE  169 (174)
Q Consensus       110 v~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~  169 (174)
                      |++.-......+..                 .++...++...+..++.||+.||.+||..
T Consensus       266 VfELL~~NLYellK-----------------~n~f~Glsl~~ir~~~~Qil~~L~~L~~l  308 (586)
T KOG0667|consen  266 VFELLSTNLYELLK-----------------NNKFRGLSLPLVRKFAQQILTALLFLHEL  308 (586)
T ss_pred             eehhhhhhHHHHHH-----------------hcCCCCCCHHHHHHHHHHHHHHHHHHHhC
Confidence            99433333333332                 23334588999999999999999999864

>cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

Probab=99.46  E-value=6.5e-13  Score=94.90  Aligned_cols=117  Identities=19%  Similarity=0.303  Sum_probs=88.9

Q ss_pred             CCeeecceecccCCeeEEEEE-EcCCCEEEEEEeecc-----CccchhHHHHHHHHHhcccccCCCeeeeecceecCC--
Q 039630           34 NGFRTSNKIGEGGFGSVYKGR-LEDGTVVAVNVLSVE-----SKQGETEFMSEVASMANINICHENLVKLHGGCIDGP--  105 (174)
Q Consensus        34 ~~~~~~~~lg~G~~g~V~~~~-~~~~~~~avK~~~~~-----~~~~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~~~~--  105 (174)
                      .+|.+.+.||+|+||.||++. ..++..+++|.+...     .......+.+|+.++++++  |+|++++.+.+....  
T Consensus         2 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~ei~~l~~l~--h~~i~~~~~~~~~~~~~   79 (264)
T cd06653           2 VNWRLGKLLGRGAFGEVYLCYDADTGRELAVKQVPFDPDSQETSKEVNALECEIQLLKNLR--HDRIVQYYGCLRDPEEK   79 (264)
T ss_pred             CceeeeeeEccCCCeEEEEEEEcCCCCEEEEEEEecCcccchhhHHHHHHHHHHHHHHHcC--CCCcceEEEEEEcCCCC
Confidence            468889999999999999998 567899999988532     1223456888999999999  999999999887653  


Q ss_pred             CcccchhhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhcc
Q 039630          106 SRILAPLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEI  170 (174)
Q Consensus       106 ~~~lv~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  170 (174)
                      ..++++  ++..++.+...+.                ....+++.....++.|++.||.|||++.
T Consensus        80 ~~~~v~--e~~~~~~L~~~~~----------------~~~~l~~~~~~~~~~~i~~al~~LH~~~  126 (264)
T cd06653          80 KLSIFV--EYMPGGSIKDQLK----------------AYGALTENVTRRYTRQILQGVSYLHSNM  126 (264)
T ss_pred             EEEEEE--EeCCCCcHHHHHH----------------HcCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            344555  6655555544321                1123678888899999999999999864

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho

>cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4

Probab=99.46  E-value=1.1e-12  Score=94.86  Aligned_cols=117  Identities=25%  Similarity=0.377  Sum_probs=81.7

Q ss_pred             CeeecceecccCCeeEEEEE-EcCCCEEEEEEeeccCc--cchhHHHHHHHHHhcc---cccCCCeeeeecceecC----
Q 039630           35 GFRTSNKIGEGGFGSVYKGR-LEDGTVVAVNVLSVESK--QGETEFMSEVASMANI---NICHENLVKLHGGCIDG----  104 (174)
Q Consensus        35 ~~~~~~~lg~G~~g~V~~~~-~~~~~~~avK~~~~~~~--~~~~~~~~e~~~l~~l---~~~h~~i~~~~~~~~~~----  104 (174)
                      .|++.+.||+|+||.||++. ..+++.+|+|.++....  .......+|+.++..+   +  |+||+++++.+...    
T Consensus         1 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~--h~ni~~~~~~~~~~~~~~   78 (288)
T cd07863           1 QYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVQTNEDGLPLSTVREVALLKRLEAFD--HPNIVRLMDVCATSRTDR   78 (288)
T ss_pred             CceEeeEEeecCCeEEEEEEECCCCcEEEEEEeccCcCCCCCchHHHHHHHHHHHhhhcC--CCCeeeeeeeeccccCCC
Confidence            37788999999999999998 55789999999975421  2233456677776654   6  99999999987643    


Q ss_pred             -CCcccchhhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhcc
Q 039630          105 -PSRILAPLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEI  170 (174)
Q Consensus       105 -~~~~lv~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  170 (174)
                       ...++++  ++... .+...+.              ......+++..+..++.|++.||.|||++.
T Consensus        79 ~~~~~lv~--e~~~~-~l~~~~~--------------~~~~~~~~~~~~~~~~~qi~~al~~lH~~~  128 (288)
T cd07863          79 ETKVTLVF--EHVDQ-DLRTYLD--------------KVPPPGLPAETIKDLMRQFLRGLDFLHANC  128 (288)
T ss_pred             CceEEEEE--ccccc-CHHHHHH--------------hcCCCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence             2245555  44432 2222110              011123788999999999999999999864

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou

>KOG0666 consensus Cyclin C-dependent kinase CDK8 [Transcription]

Probab=99.46  E-value=5.9e-14  Score=99.63  Aligned_cols=120  Identities=19%  Similarity=0.238  Sum_probs=90.1

Q ss_pred             CCeeecceecccCCeeEEEEEEc---C--CCEEEEEEeecc--CccchhHHHHHHHHHhcccccCCCeeeeecceec-CC
Q 039630           34 NGFRTSNKIGEGGFGSVYKGRLE---D--GTVVAVNVLSVE--SKQGETEFMSEVASMANINICHENLVKLHGGCID-GP  105 (174)
Q Consensus        34 ~~~~~~~~lg~G~~g~V~~~~~~---~--~~~~avK~~~~~--~~~~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~~-~~  105 (174)
                      ..|+.+..||+|.||.||++...   +  ...+|+|.++.+  .........+|+.+++.++  |+|++.+..++.. +.
T Consensus        24 ~~ye~ig~Ig~GTYG~VykA~~~~~n~kr~k~yAiKkfk~~kd~tGiS~SAcREiaL~REl~--h~nvi~Lv~Vfl~~d~  101 (438)
T KOG0666|consen   24 FEYEGIGKIGRGTYGKVYKAVRKNTNDKRTKEYAIKKFKGEKDGTGISMSACREIALLRELK--HPNVISLVKVFLSHDK  101 (438)
T ss_pred             HHhhccceecccccceeeEeeeccCCcccchhhHHHHHhccCCCCCcCHHHHHHHHHHHHhc--CCcchhHHHHHhccCc
Confidence            45888899999999999999622   1  347899999755  2344667899999999999  9999999999988 66


Q ss_pred             CcccchhhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhc
Q 039630          106 SRILAPLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEE  169 (174)
Q Consensus       106 ~~~lv~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~  169 (174)
                      ..+++++|.-.+...++..-              +..+...++..-+..+.+||+.|+.|||++
T Consensus       102 ~v~l~fdYAEhDL~~II~fH--------------r~~~~~~lp~~mvKsilwQil~Gv~YLH~N  151 (438)
T KOG0666|consen  102 KVWLLFDYAEHDLWHIIKFH--------------RASKAKQLPRSMVKSILWQILDGVHYLHSN  151 (438)
T ss_pred             eEEEEehhhhhhHHHHHHHh--------------ccchhccCCHHHHHHHHHHHHhhhHHHhhh
Confidence            67788844333333333311              112224578888899999999999999986

>KOG0599 consensus Phosphorylase kinase gamma subunit [Carbohydrate transport and metabolism]

Probab=99.46  E-value=1.5e-13  Score=96.14  Aligned_cols=117  Identities=18%  Similarity=0.249  Sum_probs=96.7

Q ss_pred             CCeeecceecccCCeeEEEEE-EcCCCEEEEEEeeccCc----cc----hhHHHHHHHHHhcccccCCCeeeeecceecC
Q 039630           34 NGFRTSNKIGEGGFGSVYKGR-LEDGTVVAVNVLSVESK----QG----ETEFMSEVASMANINICHENLVKLHGGCIDG  104 (174)
Q Consensus        34 ~~~~~~~~lg~G~~g~V~~~~-~~~~~~~avK~~~~~~~----~~----~~~~~~e~~~l~~l~~~h~~i~~~~~~~~~~  104 (174)
                      +.|...+.+|+|..+.|.+|. ..+|..+|+|++.....    ..    .+.-.+|+.||+++. +||+|+++.+.+.++
T Consensus        17 ~~y~pkeilgrgvss~vrRci~k~t~~e~a~kii~~~at~~~~e~~~~~~EaT~~Ev~ILRqv~-GHP~II~l~D~yes~   95 (411)
T KOG0599|consen   17 AKYEPKEILGRGVSSVVRRCIHKETGKEFAVKIIDVTATTESGETPYEMREATRQEISILRQVM-GHPYIIDLQDVYESD   95 (411)
T ss_pred             hhcChHHHhcccchhhhhhhhhcccccceeEEEEEecccccCCccHHHHHHHHHHHHHHHHHhc-CCCcEEEeeeeccCc
Confidence            357788999999999998887 77889999999975421    11    344678999999987 799999999999999


Q ss_pred             CCcccchhhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhc
Q 039630          105 PSRILAPLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEE  169 (174)
Q Consensus       105 ~~~~lv~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~  169 (174)
                      ...++|+  +.++.+.|+..+                .....+++.....+++|+.+|+.|||.+
T Consensus        96 sF~FlVF--dl~prGELFDyL----------------ts~VtlSEK~tR~iMrqlfegVeylHa~  142 (411)
T KOG0599|consen   96 AFVFLVF--DLMPRGELFDYL----------------TSKVTLSEKETRRIMRQLFEGVEYLHAR  142 (411)
T ss_pred             chhhhhh--hhcccchHHHHh----------------hhheeecHHHHHHHHHHHHHHHHHHHHh
Confidence            9988888  888888888755                3345689999999999999999999874

>cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1

Probab=99.46  E-value=4.1e-13  Score=98.87  Aligned_cols=111  Identities=31%  Similarity=0.317  Sum_probs=83.2

Q ss_pred             ceecccCCeeEEEEE-EcCCCEEEEEEeeccC---ccchhHHHHHHH-HHhcccccCCCeeeeecceecCCCcccchhhh
Q 039630           40 NKIGEGGFGSVYKGR-LEDGTVVAVNVLSVES---KQGETEFMSEVA-SMANINICHENLVKLHGGCIDGPSRILAPLQA  114 (174)
Q Consensus        40 ~~lg~G~~g~V~~~~-~~~~~~~avK~~~~~~---~~~~~~~~~e~~-~l~~l~~~h~~i~~~~~~~~~~~~~~lv~~~~  114 (174)
                      +.||+|+||.||++. ..++..+|+|++....   ......+..|.. +++.++  |+||+++++.+...+..++++  +
T Consensus         1 ~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~--h~~Iv~~~~~~~~~~~~~lv~--e   76 (325)
T cd05602           1 KVIGKGSFGKVLLARHKAEEKFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVK--HPFLVGLHFSFQTADKLYFVL--D   76 (325)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHHhhhHHHHHHHHHHHHHHhCC--CCCCCceeEEEEcCCeEEEEE--e
Confidence            368999999999999 4567889999997542   122233444443 567778  999999999999988888888  7


Q ss_pred             hhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhcc
Q 039630          115 SIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEI  170 (174)
Q Consensus       115 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  170 (174)
                      +..++.+...+.                ....+++..+..++.|++.||.|||++.
T Consensus        77 ~~~~~~L~~~~~----------------~~~~~~~~~~~~~~~qi~~~L~~lH~~g  116 (325)
T cd05602          77 YINGGELFYHLQ----------------RERCFLEPRARFYAAEIASALGYLHSLN  116 (325)
T ss_pred             CCCCCcHHHHHH----------------hcCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            777776655331                1224677788889999999999999864

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt

>cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases

Probab=99.46  E-value=5e-13  Score=95.67  Aligned_cols=115  Identities=23%  Similarity=0.282  Sum_probs=84.5

Q ss_pred             eecccCCeeEEEEEEcC---CCEEEEEEeeccC-ccchhHHHHHHHHHhcccccCCCeeeeecceecCCCcccchhhhhh
Q 039630           41 KIGEGGFGSVYKGRLED---GTVVAVNVLSVES-KQGETEFMSEVASMANINICHENLVKLHGGCIDGPSRILAPLQASI  116 (174)
Q Consensus        41 ~lg~G~~g~V~~~~~~~---~~~~avK~~~~~~-~~~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~~~~~~~lv~~~~~~  116 (174)
                      .||+|+||.||+|....   ...+++|.+.... ......+.+|+.+++.++  |+||+++++.+...+..++++  ++.
T Consensus         2 ~lg~G~fg~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~--h~nii~~~~~~~~~~~~~lv~--e~~   77 (269)
T cd05042           2 EIGNGWFGKVLLGEAHRGMSKARVVVKELRASATPDEQLLFLQEVQPYRELN--HPNVLQCLGQCIESIPYLLVL--EFC   77 (269)
T ss_pred             cCCccCCceEEEEEEecCCCCeEEEEeecCccCChHHHHHHHHHHHHHHhCC--CCCcceEEEEECCCCceEEEE--EeC
Confidence            58999999999997432   3467888776442 223456788999999998  999999999999888888888  666


Q ss_pred             hhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhcc
Q 039630          117 EALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEI  170 (174)
Q Consensus       117 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  170 (174)
                      +.+.+...+....           .......++.....++.|++.|++|||++.
T Consensus        78 ~~g~L~~~l~~~~-----------~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~  120 (269)
T cd05042          78 PLGDLKNYLRSNR-----------GMVAQMAQKDVLQRMACEVASGLLWLHQAD  120 (269)
T ss_pred             CCCcHHHHHHhcc-----------ccccccccHHHHHHHHHHHHHHHHHHHhcC
Confidence            6666654332111           011123457778889999999999999864

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina

>cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases

Probab=99.46  E-value=4e-13  Score=99.12  Aligned_cols=109  Identities=21%  Similarity=0.220  Sum_probs=83.1

Q ss_pred             ecccCCeeEEEEE-EcCCCEEEEEEeeccC---ccchhHHHHHHHHHhcc---cccCCCeeeeecceecCCCcccchhhh
Q 039630           42 IGEGGFGSVYKGR-LEDGTVVAVNVLSVES---KQGETEFMSEVASMANI---NICHENLVKLHGGCIDGPSRILAPLQA  114 (174)
Q Consensus        42 lg~G~~g~V~~~~-~~~~~~~avK~~~~~~---~~~~~~~~~e~~~l~~l---~~~h~~i~~~~~~~~~~~~~~lv~~~~  114 (174)
                      ||+|+||.||++. ..++..+|+|++....   .........|..++...   .  |++|+++++.+...+..++++  +
T Consensus         1 lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~--~p~i~~~~~~~~~~~~~~lv~--e   76 (330)
T cd05586           1 IGKGTFGQVYQVRKKDTRRIYAMKVLSKKEIVAKKEVAHTIGERNILVRTLLDE--SPFIVGLKFSFQTDSDLYLVT--D   76 (330)
T ss_pred             CCCCCceEEEEEEECCCCCEEEEEEEeHHHHhhhhHHHHHHHHHHHHHHhccCC--CCcCcceEEEEecCCeEEEEE--c
Confidence            6999999999998 5568999999996432   12233445566666543   5  999999999999998888888  7


Q ss_pred             hhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhcc
Q 039630          115 SIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEI  170 (174)
Q Consensus       115 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  170 (174)
                      +..++.+...+.                ....+++..+..++.||+.||+|||++.
T Consensus        77 ~~~~g~L~~~l~----------------~~~~~~~~~~~~~~~qil~al~~LH~~~  116 (330)
T cd05586          77 YMSGGELFWHLQ----------------KEGRFSEDRAKFYIAELVLALEHLHKYD  116 (330)
T ss_pred             CCCCChHHHHHH----------------hcCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            777776655331                2234788899999999999999999864

Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of

>cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases

Probab=99.46  E-value=3.7e-13  Score=95.67  Aligned_cols=110  Identities=24%  Similarity=0.433  Sum_probs=83.2

Q ss_pred             ceecccCCeeEEEEEEcC-C----------CEEEEEEeeccCccchhHHHHHHHHHhcccccCCCeeeeecceecCCCcc
Q 039630           40 NKIGEGGFGSVYKGRLED-G----------TVVAVNVLSVESKQGETEFMSEVASMANINICHENLVKLHGGCIDGPSRI  108 (174)
Q Consensus        40 ~~lg~G~~g~V~~~~~~~-~----------~~~avK~~~~~~~~~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~~~~~~~  108 (174)
                      +.||+|+||.||++.... +          ..+++|.+...... ...+.+|+.+++.++  |+|++++++.+.. +..+
T Consensus         1 ~~lg~G~~~~v~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~-~~~~~~e~~~l~~l~--h~~i~~~~~~~~~-~~~~   76 (259)
T cd05037           1 EHLGQGTFTNIYKGVLRVQSDLDIVGPGQEVSVVLKVLGSDHRD-SLAFFETASLMSQLS--HKHLVKLYGVCVR-DENI   76 (259)
T ss_pred             CcccccccceEEEEEEeccCCccccCCccceeeeeeccccchhh-HHHHHHHHHHHHcCC--CcchhheeeEEec-CCcE
Confidence            468999999999999543 3          25777877544322 667889999999999  9999999999887 6667


Q ss_pred             cchhhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhcc
Q 039630          109 LAPLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEI  170 (174)
Q Consensus       109 lv~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  170 (174)
                      +++  ++.+++.+...+..               ....+++..+..++.|++.||+|||++.
T Consensus        77 lv~--e~~~~~~L~~~l~~---------------~~~~~~~~~~~~~~~~i~~~l~~LH~~~  121 (259)
T cd05037          77 MVE--EYVKFGPLDVFLHR---------------EKNNVSLHWKLDVAKQLASALHYLEDKK  121 (259)
T ss_pred             EEE--EcCCCCcHHHHHHh---------------hccCCCHHHHHHHHHHHHHHHHHHhhCC
Confidence            777  66666666553311               1114788888999999999999999853

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki

>cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases

Probab=99.46  E-value=5.8e-13  Score=95.87  Aligned_cols=118  Identities=26%  Similarity=0.393  Sum_probs=90.0

Q ss_pred             CCeeecceecccCCeeEEEEEEc-----CCCEEEEEEeeccCcc-chhHHHHHHHHHhcccccCCCeeeeecceec--CC
Q 039630           34 NGFRTSNKIGEGGFGSVYKGRLE-----DGTVVAVNVLSVESKQ-GETEFMSEVASMANINICHENLVKLHGGCID--GP  105 (174)
Q Consensus        34 ~~~~~~~~lg~G~~g~V~~~~~~-----~~~~~avK~~~~~~~~-~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~~--~~  105 (174)
                      ..|...+.||+|+||.||++.+.     ++..+|+|.++..... ....+..|+.+++.+.  |+|++++.+++..  ..
T Consensus         4 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~ei~~l~~l~--~~~i~~~~~~~~~~~~~   81 (284)
T cd05038           4 RHLKFIKQLGEGHFGKVELCRYDPLGDNTGEQVAVKSLNHSGEEQHRSDFEREIEILRTLD--HENIVKYKGVCEKPGGR   81 (284)
T ss_pred             hhchhheeeccCCCeeEEEeeecCCCCCCceEEEEEEeccccchHHHHHHHHHHHHHHhCC--CCChheEEeeeecCCCC
Confidence            35677799999999999999843     3678999999755432 4567899999999998  9999999998876  34


Q ss_pred             CcccchhhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhcc
Q 039630          106 SRILAPLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEI  170 (174)
Q Consensus       106 ~~~lv~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  170 (174)
                      ..++++  ++.+.+.+...+.               .....+++..+..++.|++.||+|||++.
T Consensus        82 ~~~lv~--e~~~~~~l~~~l~---------------~~~~~~~~~~~~~~~~~l~~aL~~lH~~~  129 (284)
T cd05038          82 SLRLIM--EYLPSGSLRDYLQ---------------RHRDQINLKRLLLFSSQICKGMDYLGSQR  129 (284)
T ss_pred             ceEEEE--ecCCCCCHHHHHH---------------hCccccCHHHHHHHHHHHHHHHHHHHhCC
Confidence            556666  6665555544331               11124788899999999999999999854

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut

>cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3

Probab=99.46  E-value=6.4e-13  Score=95.18  Aligned_cols=116  Identities=25%  Similarity=0.311  Sum_probs=85.6

Q ss_pred             ceecccCCeeEEEEEEc---CCCEEEEEEeeccC-ccchhHHHHHHHHHhcccccCCCeeeeecceecCCCcccchhhhh
Q 039630           40 NKIGEGGFGSVYKGRLE---DGTVVAVNVLSVES-KQGETEFMSEVASMANINICHENLVKLHGGCIDGPSRILAPLQAS  115 (174)
Q Consensus        40 ~~lg~G~~g~V~~~~~~---~~~~~avK~~~~~~-~~~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~~~~~~~lv~~~~~  115 (174)
                      +.||+|+||.||+|...   ++..+++|.++... ......+.+|+.+++.++  |+|++++++.+......++++  ++
T Consensus         1 ~~lg~G~~g~Vy~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~--h~~iv~~~~~~~~~~~~~lv~--e~   76 (269)
T cd05087           1 KEIGNGWFGKVILGEVNSGYTPAQVVVKELRVSASVQEQMKFLEEAQPYRSLQ--HSNLLQCLGQCTEVTPYLLVM--EF   76 (269)
T ss_pred             CcccccCCceEEEEEEcCCCCceEEEEEecCCCCChHHHHHHHHHHHHHHhCC--CCCEeeEEEEEcCCCCcEEEE--EC
Confidence            35899999999999853   34578999887553 223456888999999999  999999999998888888888  66


Q ss_pred             hhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhcc
Q 039630          116 IEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEI  170 (174)
Q Consensus       116 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  170 (174)
                      .+++.+...+....           .......++..+..++.|++.||+|||+..
T Consensus        77 ~~~g~L~~~l~~~~-----------~~~~~~~~~~~~~~~~~qi~~al~~lH~~~  120 (269)
T cd05087          77 CPLGDLKGYLRSCR-----------KAELMTPDPTTLQRMACEIALGLLHLHKNN  120 (269)
T ss_pred             CCCCcHHHHHHHhh-----------hcccccccHHHHHHHHHHHHHHHHHHHHCC
Confidence            66666654332110           011123566777889999999999999754

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells

>cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase

Probab=99.46  E-value=2.5e-13  Score=96.89  Aligned_cols=115  Identities=19%  Similarity=0.259  Sum_probs=92.1

Q ss_pred             CeeecceecccCCeeEEEEE-EcCCCEEEEEEeeccC-ccchhHHHHHHHHHhcccccCCCeeeeecceecCCCcccchh
Q 039630           35 GFRTSNKIGEGGFGSVYKGR-LEDGTVVAVNVLSVES-KQGETEFMSEVASMANINICHENLVKLHGGCIDGPSRILAPL  112 (174)
Q Consensus        35 ~~~~~~~lg~G~~g~V~~~~-~~~~~~~avK~~~~~~-~~~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~~~~~~~lv~~  112 (174)
                      +|+..+.||+|+||.||++. ..+++.+++|.+.... ......+.+|+.+++.++  |+|++++++.+...+..++++ 
T Consensus         2 ~~~~~~~ig~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~--~~~i~~~~~~~~~~~~~~lv~-   78 (265)
T cd06605           2 DLEYLGELGAGNSGVVSKVLHRPTGKIMAVKTIRLEINEAIQKQILRELDILHKCN--SPYIVGFYGAFYNNGDISICM-   78 (265)
T ss_pred             cchHHHHhcCCCCeEEEEEEEcCCCcEEEEEEEecccChHHHHHHHHHHHHHHHCC--CCchhhhheeeecCCEEEEEE-
Confidence            56777899999999999998 4568899999987653 334567889999999999  999999999999888888887 


Q ss_pred             hhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhh
Q 039630          113 QASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHE  168 (174)
Q Consensus       113 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~  168 (174)
                       ++..+..+...+..               ....+++..+..++.|++.||+|||+
T Consensus        79 -e~~~~~~L~~~~~~---------------~~~~~~~~~~~~~~~~l~~~l~~lH~  118 (265)
T cd06605          79 -EYMDGGSLDKILKE---------------VQGRIPERILGKIAVAVLKGLTYLHE  118 (265)
T ss_pred             -EecCCCcHHHHHHH---------------ccCCCCHHHHHHHHHHHHHHHHHHcC
Confidence             66665555442211               11357888888999999999999998

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity

>KOG0660 consensus Mitogen-activated protein kinase [Signal transduction mechanisms]

Probab=99.46  E-value=3.5e-13  Score=96.90  Aligned_cols=117  Identities=20%  Similarity=0.248  Sum_probs=87.6

Q ss_pred             CCeeecceecccCCeeEEEEE-EcCCCEEEEEEee--ccCccchhHHHHHHHHHhcccccCCCeeeeecceecC-----C
Q 039630           34 NGFRTSNKIGEGGFGSVYKGR-LEDGTVVAVNVLS--VESKQGETEFMSEVASMANINICHENLVKLHGGCIDG-----P  105 (174)
Q Consensus        34 ~~~~~~~~lg~G~~g~V~~~~-~~~~~~~avK~~~--~~~~~~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~~~-----~  105 (174)
                      ..|..++.||+|+||.|+++. ..+|..||+|.+.  ....-...+..+|+.+|+.++  |+||+.+.+.+..+     .
T Consensus        22 ~~y~~~~~iG~GAyGvVcsA~~~~t~~~VAIKKi~~~F~~~~~akRtlRElklLr~~~--HeNIi~l~di~~p~~~~~f~   99 (359)
T KOG0660|consen   22 RYYVLIEPIGRGAYGVVCSAKDKRTGEKVAIKKILNPFENQIDAKRTLRELKLLRHLR--HENIIGLLDIFRPPSRDKFN   99 (359)
T ss_pred             ceecccccccCcceeeEEEEEEcCCCCEeehhhhhhhhhchHHHHHHHHHHHHHHHhc--CCCcceEEeecccccccccc
Confidence            456668999999999999999 6789999999997  334556778899999999999  99999999998762     4


Q ss_pred             CcccchhhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhccC
Q 039630          106 SRILAPLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEIK  171 (174)
Q Consensus       106 ~~~lv~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~~  171 (174)
                      +.|+|++....+...++                   .....++......+.+|+++||.|+|+...
T Consensus       100 DvYiV~elMetDL~~ii-------------------k~~~~L~d~H~q~f~YQiLrgLKyiHSAnV  146 (359)
T KOG0660|consen  100 DVYLVFELMETDLHQII-------------------KSQQDLTDDHAQYFLYQILRGLKYIHSANV  146 (359)
T ss_pred             eeEEehhHHhhHHHHHH-------------------HcCccccHHHHHHHHHHHHHhcchhhcccc
Confidence            45565522211111111                   122237788888899999999999998543

>cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2

Probab=99.46  E-value=5e-13  Score=96.41  Aligned_cols=115  Identities=28%  Similarity=0.354  Sum_probs=87.5

Q ss_pred             CeeecceecccCCeeEEEEEE-----cCCCEEEEEEeeccC-ccchhHHHHHHHHHhcccccCCCeeeeecceecCCC--
Q 039630           35 GFRTSNKIGEGGFGSVYKGRL-----EDGTVVAVNVLSVES-KQGETEFMSEVASMANINICHENLVKLHGGCIDGPS--  106 (174)
Q Consensus        35 ~~~~~~~lg~G~~g~V~~~~~-----~~~~~~avK~~~~~~-~~~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~~~~~--  106 (174)
                      .|...+.||+|+||.||.+..     .++..+|+|.++... ......+.+|+.+++.++  |+|++++.+.+...+.  
T Consensus         5 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~--h~~i~~~~~~~~~~~~~~   82 (283)
T cd05080           5 YLKKIRVLGEGHFGKVSLYCYDPANDGTGEMVAVKTLKRECGQQNTSGWKKEINILKTLY--HENIVKYKGCCSEQGGKG   82 (283)
T ss_pred             hceeceecccCCCcEEEEeeEccccCCCCceEEEEEeccccChHHHHHHHHHHHHHHhCC--CCCEeeEEEEEecCCCce
Confidence            357889999999999987652     357789999997542 234567889999999999  9999999998766433  


Q ss_pred             cccchhhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhcc
Q 039630          107 RILAPLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEI  170 (174)
Q Consensus       107 ~~lv~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  170 (174)
                      .++++  ++...+.+.....                 ...+++..+..++.|++.||.|||++.
T Consensus        83 ~~lv~--e~~~~~~l~~~~~-----------------~~~l~~~~~~~i~~~l~~~l~~lH~~~  127 (283)
T cd05080          83 LQLIM--EYVPLGSLRDYLP-----------------KHKLNLAQLLLFAQQICEGMAYLHSQH  127 (283)
T ss_pred             EEEEe--cCCCCCCHHHHHH-----------------HcCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            45555  6666665544221                 123789999999999999999999864

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign

>PHA03211 serine/threonine kinase US3; Provisional

Probab=99.46  E-value=4.6e-13  Score=102.73  Aligned_cols=111  Identities=18%  Similarity=0.170  Sum_probs=86.0

Q ss_pred             CCeeecceecccCCeeEEEEE-EcCCCEEEEEEeeccCccchhHHHHHHHHHhcccccCCCeeeeecceecCCCcccchh
Q 039630           34 NGFRTSNKIGEGGFGSVYKGR-LEDGTVVAVNVLSVESKQGETEFMSEVASMANINICHENLVKLHGGCIDGPSRILAPL  112 (174)
Q Consensus        34 ~~~~~~~~lg~G~~g~V~~~~-~~~~~~~avK~~~~~~~~~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~~~~~~~lv~~  112 (174)
                      ..|.+.+.||+|+||.||++. ..++..|++|...      ...+.+|+.++++++  |+||+++++.+...+..++++ 
T Consensus       169 ~gy~i~~~Lg~G~~G~Vy~a~~~~~~~~vavK~~~------~~~~~~E~~iL~~L~--HpnIv~l~~~~~~~~~~~lv~-  239 (461)
T PHA03211        169 LGFAIHRALTPGSEGCVFESSHPDYPQRVVVKAGW------YASSVHEARLLRRLS--HPAVLALLDVRVVGGLTCLVL-  239 (461)
T ss_pred             CCeEEEEEEccCCCeEEEEEEECCCCCEEEEeccc------ccCHHHHHHHHHHCC--CCCCCcEEEEEEECCEEEEEE-
Confidence            368999999999999999999 4457889999643      224578999999999  999999999998888877777 


Q ss_pred             hhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhcc
Q 039630          113 QASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEI  170 (174)
Q Consensus       113 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  170 (174)
                       ++.. +.+...+.               .....+++..++.++.|++.||.|||++.
T Consensus       240 -e~~~-~~L~~~l~---------------~~~~~l~~~~~~~i~~qi~~aL~yLH~~g  280 (461)
T PHA03211        240 -PKYR-SDLYTYLG---------------ARLRPLGLAQVTAVARQLLSAIDYIHGEG  280 (461)
T ss_pred             -EccC-CCHHHHHH---------------hcCCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence             4332 23333221               11225789999999999999999999864

>KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms]

Probab=99.46  E-value=6.2e-15  Score=113.26  Aligned_cols=123  Identities=20%  Similarity=0.376  Sum_probs=103.3

Q ss_pred             hhcCCeeecceecccCCeeEEEEE-EcCCCEEEEEEeeccCccchhHHHHHHHHHhcccccCCCeeeeecceecCCCccc
Q 039630           31 IATNGFRTSNKIGEGGFGSVYKGR-LEDGTVVAVNVLSVESKQGETEFMSEVASMANINICHENLVKLHGGCIDGPSRIL  109 (174)
Q Consensus        31 ~~~~~~~~~~~lg~G~~g~V~~~~-~~~~~~~avK~~~~~~~~~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~~~~~~~l  109 (174)
                      .+..+|..+..+|.|.||.||+++ .+.+..+|+|+++....+.......|+-+++..+  |+||+.++|.+...+..  
T Consensus        12 nP~ddyellqrvgsgTygdvyKaRd~~s~elaavkvVkLep~dd~~~iqqei~~~~dc~--h~nivay~gsylr~dkl--   87 (829)
T KOG0576|consen   12 NPQDDYELLQRVGSGTYGDVYKARDKRSGELAAVKVVKLEPGDDFSGIQQEIGMLRDCR--HPNIVAYFGSYLRRDKL--   87 (829)
T ss_pred             CCccchhheeeecCCcccchhhhcccccCchhhheeeeccCCccccccccceeeeecCC--CcChHHHHhhhhhhcCc--
Confidence            455689999999999999999999 7789999999999998888888999999999999  99999999999777654  


Q ss_pred             chhhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhccCCC
Q 039630          110 APLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEIKTT  173 (174)
Q Consensus       110 v~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~~~~  173 (174)
                                ++.+++|++++.++.+...      .++++.++...++..++||+|||+..|++
T Consensus        88 ----------wicMEycgggslQdiy~~T------gplselqiayvcRetl~gl~ylhs~gk~h  135 (829)
T KOG0576|consen   88 ----------WICMEYCGGGSLQDIYHVT------GPLSELQIAYVCRETLQGLKYLHSQGKIH  135 (829)
T ss_pred             ----------EEEEEecCCCcccceeeec------ccchhHHHHHHHhhhhccchhhhcCCccc
Confidence                      4555666666666554333      35788999999999999999999998764

>cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6

Probab=99.46  E-value=5.9e-13  Score=95.95  Aligned_cols=130  Identities=24%  Similarity=0.304  Sum_probs=94.9

Q ss_pred             eechhhHHhhcCCeeecceecccCCeeEEEEE-EcCCCEEEEEEeeccCccchhHHHHHHHHHhcccccCCCeeeeecce
Q 039630           23 KISYNELKIATNGFRTSNKIGEGGFGSVYKGR-LEDGTVVAVNVLSVESKQGETEFMSEVASMANINICHENLVKLHGGC  101 (174)
Q Consensus        23 ~~~~~~~~~~~~~~~~~~~lg~G~~g~V~~~~-~~~~~~~avK~~~~~~~~~~~~~~~e~~~l~~l~~~h~~i~~~~~~~  101 (174)
                      +++..++..+.+.|+..+.||.|+||.||++. ..++..+++|++.... .....+..|+.++..+. .|+|++++++.+
T Consensus         5 ~~~~~~~~~~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~a~K~~~~~~-~~~~~~~~e~~~l~~~~-~h~~i~~~~~~~   82 (282)
T cd06636           5 DIDLSALRDPAGIFELVEVVGNGTYGQVYKGRHVKTGQLAAIKVMDVTE-DEEEEIKLEINMLKKYS-HHRNIATYYGAF   82 (282)
T ss_pred             hhhhhhhcChhhhhhhheeeccCCCeEEEEEEEcCCCcEEEEEEEecCh-HHHHHHHHHHHHHHHhc-CCCcEEEEeeeh
Confidence            35566666667789999999999999999999 4668899999986442 33456788888888873 399999999988


Q ss_pred             ecC------CCcccchhhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhcc
Q 039630          102 IDG------PSRILAPLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEI  170 (174)
Q Consensus       102 ~~~------~~~~lv~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  170 (174)
                      ...      +..++++  ++...+.+...+..              .....+++..+..++.|++.||+|||++.
T Consensus        83 ~~~~~~~~~~~~~iv~--e~~~~~~L~~~~~~--------------~~~~~~~~~~~~~~~~qi~~al~~LH~~~  141 (282)
T cd06636          83 IKKSPPGHDDQLWLVM--EFCGAGSVTDLVKN--------------TKGNALKEDWIAYICREILRGLAHLHAHK  141 (282)
T ss_pred             hcccccCCCCEEEEEE--EeCCCCcHHHHHHH--------------ccCCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            542      3445666  66555555442211              11224677888889999999999999864

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea

>cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases

Probab=99.46  E-value=4.3e-13  Score=96.00  Aligned_cols=124  Identities=25%  Similarity=0.303  Sum_probs=92.5

Q ss_pred             hhcCCeeecceecccCCeeEEEEEE-cCCCEEEEEEeeccCccchhHHHHHHHHHhcccccCCCeeeeecceecCCC---
Q 039630           31 IATNGFRTSNKIGEGGFGSVYKGRL-EDGTVVAVNVLSVESKQGETEFMSEVASMANINICHENLVKLHGGCIDGPS---  106 (174)
Q Consensus        31 ~~~~~~~~~~~lg~G~~g~V~~~~~-~~~~~~avK~~~~~~~~~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~~~~~---  106 (174)
                      ..+++|++.+.||+|++|.||.+.. .++..+++|+++... .....+.+|+.+++++. .|+|++++++.+.....   
T Consensus         3 ~~~~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~-~~~~~~~~e~~~l~~~~-~h~~i~~~~~~~~~~~~~~~   80 (275)
T cd06608           3 DPTGIFELVEVIGEGTYGKVYKARHKKTGQLVAIKIMDIIE-DEEEEIKEEYNILRKYS-NHPNIATFYGAFIKKNPPGN   80 (275)
T ss_pred             CchhheeheeeecCCCCeEEEEEEECCCCcEEEEEEEecCc-hhHHHHHHHHHHHHHhc-CCCChheEEEEEEecCCCCc
Confidence            3457899999999999999999994 467899999987543 23457889999999883 39999999999976553   


Q ss_pred             ---cccchhhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhcc
Q 039630          107 ---RILAPLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEI  170 (174)
Q Consensus       107 ---~~lv~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  170 (174)
                         .++++  ++.+.+.+...+..            .......+++..+..++.|++.||.|||++.
T Consensus        81 ~~~~~lv~--e~~~~~~L~~~~~~------------~~~~~~~~~~~~~~~~~~ql~~al~~lH~~~  133 (275)
T cd06608          81 DDQLWLVM--ELCGGGSVTDLVKG------------LRKKGKRLKEEWIAYILRETLRGLAYLHENK  133 (275)
T ss_pred             ceEEEEEE--EcCCCCcHHHHHHH------------HhhcCCCCCHHHHHHHHHHHHHHHHHHhcCC
Confidence               56666  66655554432210            0111235788889999999999999999864

Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I

>cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8

Probab=99.46  E-value=1e-12  Score=96.35  Aligned_cols=118  Identities=20%  Similarity=0.267  Sum_probs=80.9

Q ss_pred             cceecccCCeeEEEEEEc---CCCEEEEEEeeccCccchhHHHHHHHHHhcccccCCCeeeeecceecCC--Ccccchhh
Q 039630           39 SNKIGEGGFGSVYKGRLE---DGTVVAVNVLSVESKQGETEFMSEVASMANINICHENLVKLHGGCIDGP--SRILAPLQ  113 (174)
Q Consensus        39 ~~~lg~G~~g~V~~~~~~---~~~~~avK~~~~~~~~~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~~~~--~~~lv~~~  113 (174)
                      ..+||+|+||.||+|...   ++..+|+|.++...  ....+.+|+.+++.++  |+||+++.+.+....  ..++++  
T Consensus         6 ~~~lG~G~~g~Vy~~~~~~~~~~~~~aiK~~~~~~--~~~~~~~E~~~l~~l~--h~niv~~~~~~~~~~~~~~~lv~--   79 (317)
T cd07868           6 GCKVGRGTYGHVYKAKRKDGKDDRDYALKQIEGTG--ISMSACREIALLRELK--HPNVISLQKVFLSHADRKVWLLF--   79 (317)
T ss_pred             ccccccCCCeEEEEEEEccCCCCceEEEEEECCCC--CcHHHHHHHHHHHhcC--CCCCcceeeeEecCCCcEEEEEE--
Confidence            368999999999999843   46789999986432  2345778999999999  999999999886543  345555  


Q ss_pred             hhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhcc
Q 039630          114 ASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEI  170 (174)
Q Consensus       114 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  170 (174)
                      ++... .+...+...       ...........+++..+..++.|++.||+|||++.
T Consensus        80 e~~~~-~l~~~~~~~-------~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~  128 (317)
T cd07868          80 DYAEH-DLWHIIKFH-------RASKANKKPVQLPRGMVKSLLYQILDGIHYLHANW  128 (317)
T ss_pred             eccCC-CHHHHHHhc-------ccccccCCcccCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            44332 221111000       00000112235788889999999999999999864

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p

>cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase

Probab=99.46  E-value=5.7e-13  Score=94.38  Aligned_cols=120  Identities=21%  Similarity=0.301  Sum_probs=95.1

Q ss_pred             CeeecceecccCCeeEEEEE-EcCCCEEEEEEeeccCc--cchhHHHHHHHHHhcccccCCCeeeeecceecCCCcccch
Q 039630           35 GFRTSNKIGEGGFGSVYKGR-LEDGTVVAVNVLSVESK--QGETEFMSEVASMANINICHENLVKLHGGCIDGPSRILAP  111 (174)
Q Consensus        35 ~~~~~~~lg~G~~g~V~~~~-~~~~~~~avK~~~~~~~--~~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~~~~~~~lv~  111 (174)
                      +|...+.||+|+||.||++. ..++..+++|.+.....  .....+..|+.+++.++  |+|++++.+.+...+..++++
T Consensus         1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~--~~~~~~~~~~~~~~~~~~lv~   78 (258)
T cd08215           1 KYEIIKQIGKGSFGKVYLVRRKSDGKLYVLKEIDLSNMSEKEREDALNEVKILKKLN--HPNIIKYYESFEEKGKLCIVM   78 (258)
T ss_pred             CceEEeeeccCCCeEEEEEEEcCCCcEEEEEEeecccCChHHHHHHHHHHHHHHhcC--CCChhheEEEEecCCEEEEEE
Confidence            47778999999999999999 44688999999976532  45667889999999999  999999999998888888887


Q ss_pred             hhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhcc
Q 039630          112 LQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEI  170 (174)
Q Consensus       112 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  170 (174)
                        ++.++..+...+...            ......+++..+..++.|++.||.|||++.
T Consensus        79 --e~~~~~~L~~~l~~~------------~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~  123 (258)
T cd08215          79 --EYADGGDLSQKIKKQ------------KKEGKPFPEEQILDWFVQLCLALKYLHSRK  123 (258)
T ss_pred             --EecCCCcHHHHHHHh------------hccCCCcCHHHHHHHHHHHHHHHHHHHhCC
Confidence              666666665433211            111245789999999999999999999863

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They

>KOG0579 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.45  E-value=6.1e-15  Score=113.34  Aligned_cols=116  Identities=17%  Similarity=0.247  Sum_probs=91.7

Q ss_pred             eeecceecccCCeeEEEEE-EcCCCEEEEEEeeccCccchhHHHHHHHHHhcccccCCCeeeeecceecCCCcccchhhh
Q 039630           36 FRTSNKIGEGGFGSVYKGR-LEDGTVVAVNVLSVESKQGETEFMSEVASMANINICHENLVKLHGGCIDGPSRILAPLQA  114 (174)
Q Consensus        36 ~~~~~~lg~G~~g~V~~~~-~~~~~~~avK~~~~~~~~~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~~~~~~~lv~~~~  114 (174)
                      +.++..||.|+||+||++. ..++...|.|+|.........++.-||+||..++  ||+|+++++.|...+.++++.  +
T Consensus        34 WeIiGELGDGAFGKVyKA~nket~~lAAaKvIetkseEELEDylVEIeILa~Cd--HP~ivkLl~ayy~enkLwili--E  109 (1187)
T KOG0579|consen   34 WEIIGELGDGAFGKVYKAVNKETKLLAAAKVIETKSEEELEDYLVEIEILAECD--HPVIVKLLSAYYFENKLWILI--E  109 (1187)
T ss_pred             HHHHhhhcCccchhhhhhhcccchhhhhhhhhcccchhHHhhhhhhhhhhhcCC--ChHHHHHHHHHhccCceEEEE--e
Confidence            5567789999999999998 6667788999998666677788999999999999  999999999998887777666  4


Q ss_pred             hhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhcc
Q 039630          115 SIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEI  170 (174)
Q Consensus       115 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  170 (174)
                      ++.+|..-.          ...     .-...+.+.++..+++|++.||.|||++-
T Consensus       110 FC~GGAVDa----------iml-----EL~r~LtE~QIqvvc~q~ldALn~LHs~~  150 (1187)
T KOG0579|consen  110 FCGGGAVDA----------IML-----ELGRVLTEDQIQVVCYQVLDALNWLHSQN  150 (1187)
T ss_pred             ecCCchHhH----------HHH-----HhccccchHHHHHHHHHHHHHHHHHhhcc
Confidence            444433222          111     12235789999999999999999999974

>cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl

Probab=99.45  E-value=2.4e-13  Score=97.43  Aligned_cols=120  Identities=24%  Similarity=0.379  Sum_probs=83.3

Q ss_pred             eecceecccCCeeEEEEEEcC-CC--EEEEEEeecc--CccchhHHHHHHHHHhcccccCCCeeeeecceecCC------
Q 039630           37 RTSNKIGEGGFGSVYKGRLED-GT--VVAVNVLSVE--SKQGETEFMSEVASMANINICHENLVKLHGGCIDGP------  105 (174)
Q Consensus        37 ~~~~~lg~G~~g~V~~~~~~~-~~--~~avK~~~~~--~~~~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~~~~------  105 (174)
                      .+.+.||+|+||.||+|.... +.  .+|+|.++..  .......+..|+.+++.++  |+||+++++.+....      
T Consensus         2 ~i~~~ig~G~~g~V~~~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~--h~~iv~~~~~~~~~~~~~~~~   79 (272)
T cd05075           2 ALGKTLGEGEFGSVMEGQLNQDDSILKVAVKTMKIAICTRSEMEDFLSEAVCMKEFD--HPNVMRLIGVCLQTVESEGYP   79 (272)
T ss_pred             ccccccCcccCceEEEeEEccCCCeeeEEEEecccCcCCHHHHHHHHHHHHHHHhCC--CCCcceEEEEEccCCcccCCC
Confidence            456889999999999998543 32  6899988754  2334567888999999999  999999999875432      


Q ss_pred             CcccchhhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhcc
Q 039630          106 SRILAPLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEI  170 (174)
Q Consensus       106 ~~~lv~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  170 (174)
                      ..++++  ++...+.+...+..          .........+++..+..++.|++.||+|||++.
T Consensus        80 ~~~~v~--e~~~~~~l~~~~~~----------~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~  132 (272)
T cd05075          80 SPVVIL--PFMKHGDLHSFLLY----------SRLGDCPQYLPTQMLVKFMTDIASGMEYLSSKS  132 (272)
T ss_pred             CcEEEE--EeCCCCcHHHHHHH----------hcccCCcccCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            234444  55555544332211          000112234788999999999999999999753

Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor

>cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase

Probab=99.45  E-value=4.5e-13  Score=95.95  Aligned_cols=117  Identities=22%  Similarity=0.269  Sum_probs=88.8

Q ss_pred             CCeeecceecccCCeeEEEEEEcC----CCEEEEEEeeccC-ccchhHHHHHHHHHhcccccCCCeeeeecceecCCCcc
Q 039630           34 NGFRTSNKIGEGGFGSVYKGRLED----GTVVAVNVLSVES-KQGETEFMSEVASMANINICHENLVKLHGGCIDGPSRI  108 (174)
Q Consensus        34 ~~~~~~~~lg~G~~g~V~~~~~~~----~~~~avK~~~~~~-~~~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~~~~~~~  108 (174)
                      .+|.+.+.||+|+||.||+|...+    ...+++|...... ....+.+.+|+.+++.++  |+|++++++.+.. +..+
T Consensus         6 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~e~~~l~~~~--h~~i~~~~~~~~~-~~~~   82 (270)
T cd05056           6 EDITLGRCIGEGQFGDVYQGVYMSPENEKIAVAVKTCKNCTSPSVREKFLQEAYIMRQFD--HPHIVKLIGVITE-NPVW   82 (270)
T ss_pred             hhceeeeeeCCccceeEEEEEEecCCCCCcceEEEecCCcCCHHHHHHHHHHHHHHHhCC--CCchhceeEEEcC-CCcE
Confidence            457888999999999999998432    2468999887553 344567889999999999  9999999998865 4455


Q ss_pred             cchhhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhcc
Q 039630          109 LAPLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEI  170 (174)
Q Consensus       109 lv~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  170 (174)
                      +++  ++.+.+.+...+..               ....+++..+..++.|++.||+|||++.
T Consensus        83 lv~--e~~~~~~L~~~l~~---------------~~~~~~~~~~~~~~~~l~~~l~~lH~~~  127 (270)
T cd05056          83 IVM--ELAPLGELRSYLQV---------------NKYSLDLASLILYSYQLSTALAYLESKR  127 (270)
T ss_pred             EEE--EcCCCCcHHHHHHh---------------CCCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            666  66666666543311               1224788899999999999999999864

Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions

>cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors

Probab=99.45  E-value=2.5e-13  Score=100.52  Aligned_cols=139  Identities=18%  Similarity=0.258  Sum_probs=93.1

Q ss_pred             HHhhcCCeeecceecccCCeeEEEEEE------cCCCEEEEEEeeccC-ccchhHHHHHHHHHhcccccCCCeeeeecce
Q 039630           29 LKIATNGFRTSNKIGEGGFGSVYKGRL------EDGTVVAVNVLSVES-KQGETEFMSEVASMANINICHENLVKLHGGC  101 (174)
Q Consensus        29 ~~~~~~~~~~~~~lg~G~~g~V~~~~~------~~~~~~avK~~~~~~-~~~~~~~~~e~~~l~~l~~~h~~i~~~~~~~  101 (174)
                      |..+.++|++.+.||+|+||.||+|..      .++..||+|.++... ......+..|+.++.++. .|+||+++++.+
T Consensus         2 ~~~~~~~~~i~~~lG~G~fg~Vy~a~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~E~~~~~~l~-~h~niv~~~~~~   80 (337)
T cd05054           2 WEFPRDRLKLGKPLGRGAFGKVIQASAFGIEKSASCRTVAVKMLKEGATASEYKALMTELKILIHIG-HHLNVVNLLGAC   80 (337)
T ss_pred             cccCHHHhhhhcccccCcCceEEeccccccccccccceeeeeeccCCCCHHHHHHHHHHHHHHHhhc-cCcchhheeeeE
Confidence            455666799999999999999999862      235789999987442 233456788999999983 399999999988


Q ss_pred             ecCC-Ccccchhhhhhhhhhhhhhhhcccceee--------ee-------------------------------------
Q 039630          102 IDGP-SRILAPLQASIEALFLFTKLWKMDKFIS--------IY-------------------------------------  135 (174)
Q Consensus       102 ~~~~-~~~lv~~~~~~~~~~l~~~~~~~~~~~~--------~~-------------------------------------  135 (174)
                      ...+ ..++++  ++..++.+...+........        ..                                     
T Consensus        81 ~~~~~~~~~v~--ey~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  158 (337)
T cd05054          81 TKPGGPLMVIV--EYCKFGNLSNYLRSKRECFSPYRNKSTRKREMKQKEGKKQRLDSVSSSQSSASSGFIEDKSLSDVEE  158 (337)
T ss_pred             ecCCCCEEEEE--ecCCCCCHHHHHHhccccccccccccccccccccccccccccccCCccccccccccccCcchhhccc
Confidence            6553 455556  66666665543322110000        00                                     


Q ss_pred             eecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhcc
Q 039630          136 VVSGSKKNRVKFNWIARREIALGIARGLAYIHEEI  170 (174)
Q Consensus       136 ~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  170 (174)
                      ...+.......+++..+..++.||+.||+|||++.
T Consensus       159 ~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~~  193 (337)
T cd05054         159 DEEGDELYKEPLTLEDLISYSFQVARGMEFLASRK  193 (337)
T ss_pred             chhhhHHhhcCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            00000001235789999999999999999999753

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto

>cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10

Probab=99.45  E-value=1.1e-12  Score=95.77  Aligned_cols=118  Identities=27%  Similarity=0.419  Sum_probs=88.2

Q ss_pred             cCCeeecceecccCCeeEEEEE-EcCCCEEEEEEeeccCc--cchhHHHHHHHHHhcccccCCCeeeeecceecC--CCc
Q 039630           33 TNGFRTSNKIGEGGFGSVYKGR-LEDGTVVAVNVLSVESK--QGETEFMSEVASMANINICHENLVKLHGGCIDG--PSR  107 (174)
Q Consensus        33 ~~~~~~~~~lg~G~~g~V~~~~-~~~~~~~avK~~~~~~~--~~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~~~--~~~  107 (174)
                      .++|...+.||+|+||.||++. ..++..||+|.++....  .....+.+|+.++++++  |+|++++.+.+...  +..
T Consensus         6 ~~~y~~~~~ig~g~~~~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~--h~~i~~~~~~~~~~~~~~~   83 (309)
T cd07845           6 VTEFEKLNRIGEGTYGIVYRARDTTSGEIVALKKVRMDNERDGIPISSLREITLLLNLR--HPNIVELKEVVVGKHLDSI   83 (309)
T ss_pred             ccceeEeeeeeecCCEEEEEEEECCCCcEEEEEEEEeccCCCCCcchhhHHHHHHHhCC--CCCCcceEEEEecCCCCeE
Confidence            4579999999999999999999 45689999999975432  22335678999999999  99999999998655  345


Q ss_pred             ccchhhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhcc
Q 039630          108 ILAPLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEI  170 (174)
Q Consensus       108 ~lv~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  170 (174)
                      ++++  ++... .+...+.               .....+++..+..++.|++.||.|||++.
T Consensus        84 ~lv~--e~~~~-~l~~~l~---------------~~~~~l~~~~~~~~~~qi~~~l~~lH~~~  128 (309)
T cd07845          84 FLVM--EYCEQ-DLASLLD---------------NMPTPFSESQVKCLMLQLLRGLQYLHENF  128 (309)
T ss_pred             EEEE--ecCCC-CHHHHHH---------------hcccCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            6666  44432 2222110               11134788999999999999999999865

Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing

>cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases

Probab=99.45  E-value=1e-12  Score=94.72  Aligned_cols=116  Identities=23%  Similarity=0.342  Sum_probs=89.6

Q ss_pred             eeecceecccCCeeEEEEE-EcCCCEEEEEEeeccC--ccchhHHHHHHHHHhcccccCCCeeeeecceecCCCcccchh
Q 039630           36 FRTSNKIGEGGFGSVYKGR-LEDGTVVAVNVLSVES--KQGETEFMSEVASMANINICHENLVKLHGGCIDGPSRILAPL  112 (174)
Q Consensus        36 ~~~~~~lg~G~~g~V~~~~-~~~~~~~avK~~~~~~--~~~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~~~~~~~lv~~  112 (174)
                      |+..+.||+|++|.||++. ..+|..+++|++....  ......+.+|+.+++.++  |+|++++++.+...+..++++ 
T Consensus         1 y~~~~~l~~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~--~~~iv~~~~~~~~~~~~~iv~-   77 (283)
T cd07835           1 YQKVEKIGEGTYGVVYKARDKLTGEIVALKKIRLETEDEGVPSTAIREISLLKELN--HPNIVRLLDVVHSENKLYLVF-   77 (283)
T ss_pred             CchheEecCCCCeEEEEEEEcCCCCEEEEEEeecccccccchhHHHHHHHHHHhcC--CCCccCHhheeccCCeEEEEE-
Confidence            4567899999999999998 4578999999997542  223456788999999999  999999999999888888888 


Q ss_pred             hhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhcc
Q 039630          113 QASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEI  170 (174)
Q Consensus       113 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  170 (174)
                       ++.+ ..+...+..              .....+++..++.++.|++.||+|||++.
T Consensus        78 -e~~~-~~l~~~~~~--------------~~~~~~~~~~~~~~~~~i~~~L~~lH~~~  119 (283)
T cd07835          78 -EFLD-LDLKKYMDS--------------SPLTGLDPPLIKSYLYQLLQGIAYCHSHR  119 (283)
T ss_pred             -eccC-cCHHHHHhh--------------CCCCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence             5443 233332210              11124789999999999999999999864

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc

>cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6

Probab=99.45  E-value=6.2e-13  Score=98.58  Aligned_cols=116  Identities=21%  Similarity=0.246  Sum_probs=88.7

Q ss_pred             cCCeeecceecccCCeeEEEEE-EcCCCEEEEEEeeccCccchhHHHHHHHHHhcccccCCCeeeeecceecCC------
Q 039630           33 TNGFRTSNKIGEGGFGSVYKGR-LEDGTVVAVNVLSVESKQGETEFMSEVASMANINICHENLVKLHGGCIDGP------  105 (174)
Q Consensus        33 ~~~~~~~~~lg~G~~g~V~~~~-~~~~~~~avK~~~~~~~~~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~~~~------  105 (174)
                      .++|...+.||+|+||.||+|. ..++..+++|.+..........+.+|+.+++.++  |+|++++++.+....      
T Consensus         4 ~~~y~~~~~Lg~g~~g~vy~~~~~~~~~~v~iK~i~~~~~~~~~~~~~Ei~~l~~l~--h~~i~~~~~~~~~~~~~~~~~   81 (342)
T cd07854           4 GSRYMDLRPLGCGSNGLVFSAVDSDCDKRVAVKKIVLTDPQSVKHALREIKIIRRLD--HDNIVKVYEVLGPSGSDLTED   81 (342)
T ss_pred             CcceEEEEEecCCCCEEEEEEEECCCCcEEEEEEEecCCCchHHHHHHHHHHHHhcC--CCcchhhHhhhcccccccccc
Confidence            3679999999999999999998 5678899999997665556677889999999999  999999998776543      


Q ss_pred             --------CcccchhhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhcc
Q 039630          106 --------SRILAPLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEI  170 (174)
Q Consensus       106 --------~~~lv~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  170 (174)
                              ..++++  ++.+. .+...+                 ....+++..+..++.|++.||.|||+..
T Consensus        82 ~~~~~~~~~~~lv~--e~~~~-~L~~~~-----------------~~~~l~~~~~~~~~~qi~~aL~~LH~~g  134 (342)
T cd07854          82 VGSLTELNSVYIVQ--EYMET-DLANVL-----------------EQGPLSEEHARLFMYQLLRGLKYIHSAN  134 (342)
T ss_pred             cccccccceEEEEe--ecccc-cHHHHH-----------------HcCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence                    234454  33332 222211                 1124788899999999999999999864

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi

>cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase

Probab=99.45  E-value=8.1e-13  Score=95.44  Aligned_cols=119  Identities=22%  Similarity=0.329  Sum_probs=96.4

Q ss_pred             hcCCeeecceecccCCeeEEEEEEc-CCCEEEEEEeeccCccchhHHHHHHHHHhcccccCCCeeeeecceecCCCcccc
Q 039630           32 ATNGFRTSNKIGEGGFGSVYKGRLE-DGTVVAVNVLSVESKQGETEFMSEVASMANINICHENLVKLHGGCIDGPSRILA  110 (174)
Q Consensus        32 ~~~~~~~~~~lg~G~~g~V~~~~~~-~~~~~avK~~~~~~~~~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~~~~~~~lv  110 (174)
                      .++.|.....||+|.+|.||++... ++..+++|+++.... ....+..|+.+++.++  |+|++++++.+...+..+++
T Consensus        17 ~~~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~-~~~~~~~e~~~l~~l~--~~~i~~~~~~~~~~~~~~lv   93 (286)
T cd06614          17 PRELYKNLEKIGEGASGEVYKATDRATGKEVAIKKMRLRKQ-NKELIINEILIMKDCK--HPNIVDYYDSYLVGDELWVV   93 (286)
T ss_pred             ccccchHhHhccCCCCeEEEEEEEccCCcEEEEEEEecCch-hHHHHHHHHHHHHHCC--CCCeeEEEEEEEECCEEEEE
Confidence            4466888899999999999999954 688999999975543 4567889999999999  99999999999998888888


Q ss_pred             hhhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhcc
Q 039630          111 PLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEI  170 (174)
Q Consensus       111 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  170 (174)
                      +  ++.+++.+...+..               ....+++..+..++.|++.||+|||++.
T Consensus        94 ~--e~~~~~~L~~~l~~---------------~~~~l~~~~~~~i~~~i~~~L~~lH~~g  136 (286)
T cd06614          94 M--EYMDGGSLTDIITQ---------------NFVRMNEPQIAYVCREVLQGLEYLHSQN  136 (286)
T ss_pred             E--eccCCCcHHHHHHH---------------hccCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            8  66666666553321               1125788899999999999999999854

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou

>cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases

Probab=99.45  E-value=6.5e-13  Score=95.44  Aligned_cols=117  Identities=22%  Similarity=0.332  Sum_probs=91.4

Q ss_pred             CeeecceecccCCeeEEEEE-EcCCCEEEEEEeecc-CccchhHHHHHHHHHhcccc-cCCCeeeeecceecCCCcccch
Q 039630           35 GFRTSNKIGEGGFGSVYKGR-LEDGTVVAVNVLSVE-SKQGETEFMSEVASMANINI-CHENLVKLHGGCIDGPSRILAP  111 (174)
Q Consensus        35 ~~~~~~~lg~G~~g~V~~~~-~~~~~~~avK~~~~~-~~~~~~~~~~e~~~l~~l~~-~h~~i~~~~~~~~~~~~~~lv~  111 (174)
                      .|+..+.||+|+||.||+|. ..++..+++|.++.. .......+.+|+.+++.+.. .|+|++++++.+...+..++++
T Consensus         2 ~y~~~~~l~~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~vi~~~~~~~~~~~~~lv~   81 (277)
T cd06917           2 LYQRLELIGRGAYGAVYRGKHVPTGRVVALKIINLDTPDDDVSDIQREVALLSQLRQSQPPNITKYYGSYLKGPRLWIIM   81 (277)
T ss_pred             hhhhhhheeccCCceEEEEEEcCCCcEEEEEEecCCCCchhHHHHHHHHHHHHHhccCCCCCeeeEeeeeeeCCEEEEEE
Confidence            36677899999999999999 467889999998754 23445678889888887621 3899999999998888888888


Q ss_pred             hhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhcc
Q 039630          112 LQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEI  170 (174)
Q Consensus       112 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  170 (174)
                        ++..++.+...+.                 ...+++...+.++.|++.||.|||+..
T Consensus        82 --e~~~~~~L~~~~~-----------------~~~l~~~~~~~i~~~i~~~l~~lh~~~  121 (277)
T cd06917          82 --EYAEGGSVRTLMK-----------------AGPIAEKYISVIIREVLVALKYIHKVG  121 (277)
T ss_pred             --ecCCCCcHHHHHH-----------------ccCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence              6666666554221                 114788889999999999999999864

Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent

>cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase

Probab=99.45  E-value=3.1e-13  Score=100.13  Aligned_cols=116  Identities=22%  Similarity=0.225  Sum_probs=84.2

Q ss_pred             cCCeeecceecccCCeeEEEEE-EcCCCEEEEEEeeccC--ccchhHHHHHHHHHhcccccCCCeeeeecceecCCC---
Q 039630           33 TNGFRTSNKIGEGGFGSVYKGR-LEDGTVVAVNVLSVES--KQGETEFMSEVASMANINICHENLVKLHGGCIDGPS---  106 (174)
Q Consensus        33 ~~~~~~~~~lg~G~~g~V~~~~-~~~~~~~avK~~~~~~--~~~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~~~~~---  106 (174)
                      .+.|...+.||+|+||.||++. ..++..||+|.+....  ......+.+|+.+++.++  |+||+++++++.....   
T Consensus        14 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~--h~~iv~~~~~~~~~~~~~~   91 (343)
T cd07878          14 PERYQNLTPVGSGAYGSVCSAYDTRLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHMK--HENVIGLLDVFTPATSIEN   91 (343)
T ss_pred             hhhhhhheecccCCCeEEEEEEECCCCCEEEEEEeCchhhhhHHHHHHHHHHHHHHhcC--CCchhhhhhhhcccccccc
Confidence            3579999999999999999998 5678899999987542  223455778999999999  9999999998754321   


Q ss_pred             ---cccchhhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhcc
Q 039630          107 ---RILAPLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEI  170 (174)
Q Consensus       107 ---~~lv~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  170 (174)
                         .++++  +.. ++.+.. +                .....+++..+..++.|++.||.|||++.
T Consensus        92 ~~~~~~~~--~~~-~~~l~~-~----------------~~~~~l~~~~~~~i~~qi~~aL~~LH~~~  138 (343)
T cd07878          92 FNEVYLVT--NLM-GADLNN-I----------------VKCQKLSDEHVQFLIYQLLRGLKYIHSAG  138 (343)
T ss_pred             cCcEEEEe--ecC-CCCHHH-H----------------HhcCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence               23333  211 111111 1                11234788999999999999999999864

Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is

>cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4

Probab=99.45  E-value=8.3e-13  Score=96.29  Aligned_cols=117  Identities=26%  Similarity=0.472  Sum_probs=85.6

Q ss_pred             CCeeecceecccCCeeEEEEEE-cCCC----EEEEEEeeccC-ccchhHHHHHHHHHhcccccCCCeeeeecceecCCCc
Q 039630           34 NGFRTSNKIGEGGFGSVYKGRL-EDGT----VVAVNVLSVES-KQGETEFMSEVASMANINICHENLVKLHGGCIDGPSR  107 (174)
Q Consensus        34 ~~~~~~~~lg~G~~g~V~~~~~-~~~~----~~avK~~~~~~-~~~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~~~~~~  107 (174)
                      ++|+..+.||+|+||.||++.. .++.    .+++|.+.... ......+.+|+.+++.++  |+|++++++.+.... .
T Consensus         7 ~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~l~--h~niv~~~~~~~~~~-~   83 (303)
T cd05110           7 TELKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMD--HPHLVRLLGVCLSPT-I   83 (303)
T ss_pred             hhceeccccccCCCccEEEEEEecCCCcceeeEEEEeccccCCHHHHHHHHHHHHHHHhCC--CCCcccEEEEEcCCC-c
Confidence            4677889999999999999984 4454    56888876442 223446788999999999  999999999886543 4


Q ss_pred             ccchhhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhcc
Q 039630          108 ILAPLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEI  170 (174)
Q Consensus       108 ~lv~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  170 (174)
                      .+++  ++.+.+.+...+.               .....+++..+..++.|++.||+|||++.
T Consensus        84 ~~v~--e~~~~g~l~~~~~---------------~~~~~~~~~~~~~~~~qi~~~L~~LH~~~  129 (303)
T cd05110          84 QLVT--QLMPHGCLLDYVH---------------EHKDNIGSQLLLNWCVQIAKGMMYLEERR  129 (303)
T ss_pred             eeee--hhcCCCCHHHHHH---------------hcccCCCHHHHHHHHHHHHHHHHHHhhcC
Confidence            4444  5555555544321               11224678888999999999999999864

Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin

>PHA03207 serine/threonine kinase US3; Provisional

Probab=99.45  E-value=7.5e-13  Score=99.92  Aligned_cols=112  Identities=15%  Similarity=0.150  Sum_probs=86.0

Q ss_pred             cCCeeecceecccCCeeEEEEEEc---CCCEEEEEEeeccCccchhHHHHHHHHHhcccccCCCeeeeecceecCCCccc
Q 039630           33 TNGFRTSNKIGEGGFGSVYKGRLE---DGTVVAVNVLSVESKQGETEFMSEVASMANINICHENLVKLHGGCIDGPSRIL  109 (174)
Q Consensus        33 ~~~~~~~~~lg~G~~g~V~~~~~~---~~~~~avK~~~~~~~~~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~~~~~~~l  109 (174)
                      ...|.+++.||+|+||.||++...   .+..+++|.+...     ....+|+.+++.++  |+||+++++.+......++
T Consensus        91 ~~~y~i~~~Lg~G~~g~Vy~~~~~~~~~~~~v~vK~~~~~-----~~~~~E~~il~~l~--h~~iv~~~~~~~~~~~~~l  163 (392)
T PHA03207         91 RMQYNILSSLTPGSEGEVFVCTKHGDEQRKKVIVKAVTGG-----KTPGREIDILKTIS--HRAIINLIHAYRWKSTVCM  163 (392)
T ss_pred             cCceEEEEeecCCCCeEEEEEEEcCCccceeEEEEecccc-----ccHHHHHHHHHhcC--CCCccceeeeEeeCCEEEE
Confidence            346999999999999999998742   3568999988633     23468999999999  9999999999988887777


Q ss_pred             chhhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhcc
Q 039630          110 APLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEI  170 (174)
Q Consensus       110 v~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  170 (174)
                      ++  ++... .+...+                .....+++..++.++.|++.||.|||++.
T Consensus       164 v~--e~~~~-~l~~~l----------------~~~~~l~~~~~~~i~~ql~~aL~~LH~~g  205 (392)
T PHA03207        164 VM--PKYKC-DLFTYV----------------DRSGPLPLEQAITIQRRLLEALAYLHGRG  205 (392)
T ss_pred             Ee--hhcCC-CHHHHH----------------HhcCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            77  43332 222211                12235789999999999999999999864

>cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2

Probab=99.44  E-value=7e-13  Score=94.37  Aligned_cols=118  Identities=23%  Similarity=0.278  Sum_probs=88.4

Q ss_pred             CeeecceecccCCeeEEEEE-EcCCCEEEEEEeeccC--ccchhHHHHHHHHHhcccccCCCeeeeecceecCC--Cccc
Q 039630           35 GFRTSNKIGEGGFGSVYKGR-LEDGTVVAVNVLSVES--KQGETEFMSEVASMANINICHENLVKLHGGCIDGP--SRIL  109 (174)
Q Consensus        35 ~~~~~~~lg~G~~g~V~~~~-~~~~~~~avK~~~~~~--~~~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~~~~--~~~l  109 (174)
                      +|...+.||.|+||.||++. ..++..+++|.++...  ......+..|+.+++.++  |+|++++++.+....  ..++
T Consensus         1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~--~~~i~~~~~~~~~~~~~~~~~   78 (265)
T cd08217           1 DYEVLETIGKGSFGTVRKVRRKSDGKILVWKEIDYGNMTEKEKQQLVSEVNILRELK--HPNIVRYYDRIIDRSNQTLYI   78 (265)
T ss_pred             CceeeeeeccCCCeEEEEeeecCCCCEEEEEEEecccCCHHHHHHHHHHHHHHHhcC--CCccceeeeeeecCCCCEEEE
Confidence            47778999999999999998 5678899999987542  233556888999999999  999999999876543  3455


Q ss_pred             chhhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhh
Q 039630          110 APLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHE  168 (174)
Q Consensus       110 v~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~  168 (174)
                      ++  ++.+.+.+...+...            ......+++..++.++.|++.||+|||.
T Consensus        79 ~~--e~~~~~~L~~~l~~~------------~~~~~~l~~~~~~~~~~~i~~~l~~lH~  123 (265)
T cd08217          79 VM--EYCEGGDLAQLIQKC------------KKERKYIEEEFIWRILTQLLLALYECHN  123 (265)
T ss_pred             Ee--hhccCCCHHHHHHHH------------hhcccCCCHHHHHHHHHHHHHHHHHHhc
Confidence            55  666655554432110            1123457888999999999999999993

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi

>cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase

Probab=99.44  E-value=8.8e-13  Score=97.83  Aligned_cols=116  Identities=21%  Similarity=0.242  Sum_probs=86.2

Q ss_pred             cCCeeecceecccCCeeEEEEE-EcCCCEEEEEEeeccC--ccchhHHHHHHHHHhcccccCCCeeeeecceecCCCc--
Q 039630           33 TNGFRTSNKIGEGGFGSVYKGR-LEDGTVVAVNVLSVES--KQGETEFMSEVASMANINICHENLVKLHGGCIDGPSR--  107 (174)
Q Consensus        33 ~~~~~~~~~lg~G~~g~V~~~~-~~~~~~~avK~~~~~~--~~~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~~~~~~--  107 (174)
                      .++|...+.||+|+||.||++. ..++..+|+|.+....  ......+.+|+.+++.++  |+||+++.+.+......  
T Consensus        14 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~--h~~iv~~~~~~~~~~~~~~   91 (343)
T cd07880          14 PDRYRDLKQVGSGAYGTVCSALDRRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMK--HENVIGLLDVFTPDLSLDR   91 (343)
T ss_pred             ccceEEEEEeeecCCeEEEEEEECCCCcEEEEEEecccccchHHHHHHHHHHHHHHhcC--CCCccceeeeecCCccccc
Confidence            4579999999999999999998 5678999999986432  223456789999999999  99999999988765432  


Q ss_pred             ----ccchhhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhcc
Q 039630          108 ----ILAPLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEI  170 (174)
Q Consensus       108 ----~lv~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  170 (174)
                          ++++  ++. +..+.. +                .....+++..+..++.|++.||+|||+..
T Consensus        92 ~~~~~lv~--e~~-~~~l~~-~----------------~~~~~l~~~~~~~i~~qi~~al~~LH~~g  138 (343)
T cd07880          92 FHDFYLVM--PFM-GTDLGK-L----------------MKHEKLSEDRIQFLVYQMLKGLKYIHAAG  138 (343)
T ss_pred             cceEEEEE--ecC-CCCHHH-H----------------HhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence                4444  332 112211 1                01124788899999999999999999854

Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12

>cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5

Probab=99.44  E-value=2.2e-13  Score=98.88  Aligned_cols=114  Identities=25%  Similarity=0.335  Sum_probs=90.5

Q ss_pred             eeecceecccCCeeEEEEE-EcCCCEEEEEEeeccCccchhHHHHHHHHHhcccccCCCeeeeecceecCCCcccchhhh
Q 039630           36 FRTSNKIGEGGFGSVYKGR-LEDGTVVAVNVLSVESKQGETEFMSEVASMANINICHENLVKLHGGCIDGPSRILAPLQA  114 (174)
Q Consensus        36 ~~~~~~lg~G~~g~V~~~~-~~~~~~~avK~~~~~~~~~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~~~~~~~lv~~~~  114 (174)
                      |.....||+|+||.||++. ..++..+++|.++.........+.+|+.+++.++  |+|++++++.+...+..++++  +
T Consensus        24 ~~~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~--h~~ii~~~~~~~~~~~~~lv~--e   99 (292)
T cd06658          24 LDSFIKIGEGSTGIVCIATEKHTGKQVAVKKMDLRKQQRRELLFNEVVIMRDYH--HENVVDMYNSYLVGDELWVVM--E   99 (292)
T ss_pred             HhhhhcccCCCCeEEEEEEECCCCCEEEEEEEecchHHHHHHHHHHHHHHHhCC--CCcHHHHHHheecCCeEEEEE--e
Confidence            4445779999999999998 4568899999987654455667889999999998  999999999999888888888  6


Q ss_pred             hhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhcc
Q 039630          115 SIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEI  170 (174)
Q Consensus       115 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  170 (174)
                      +.+++.+...+                 ....+++..+..++.|++.||+|||++.
T Consensus       100 ~~~~~~L~~~~-----------------~~~~l~~~~~~~~~~qi~~~l~~LH~~~  138 (292)
T cd06658         100 FLEGGALTDIV-----------------THTRMNEEQIATVCLSVLRALSYLHNQG  138 (292)
T ss_pred             CCCCCcHHHHH-----------------hcCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            66665554321                 1123678888999999999999999753

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express

>cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases

Probab=99.44  E-value=1.3e-12  Score=92.52  Aligned_cols=116  Identities=30%  Similarity=0.411  Sum_probs=93.2

Q ss_pred             CeeecceecccCCeeEEEEE-EcCCCEEEEEEeeccCc--cchhHHHHHHHHHhcccccCCCeeeeecceecCCCcccch
Q 039630           35 GFRTSNKIGEGGFGSVYKGR-LEDGTVVAVNVLSVESK--QGETEFMSEVASMANINICHENLVKLHGGCIDGPSRILAP  111 (174)
Q Consensus        35 ~~~~~~~lg~G~~g~V~~~~-~~~~~~~avK~~~~~~~--~~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~~~~~~~lv~  111 (174)
                      +|...+.||+|++|.||++. ..++..+++|.+.....  .....+.+|+.++.+++  |+|++++.+.+...+..++++
T Consensus         1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~--~~~i~~~~~~~~~~~~~~~v~   78 (254)
T cd06627           1 NYQLGDLIGRGAFGVVYKGLNLETGDFVAIKQISLEKIKEEALKSIMQEIDLLKNLK--HPNIVKYIGSIETSDSLYIIL   78 (254)
T ss_pred             CceeeeEEcccCCeEEEEEEEcCCCcEEEEEEecccccCHHHHHHHHHHHHHHHhCC--CCCccEEEEEEEeCCEEEEEE
Confidence            36778999999999999998 44678999999976543  35567899999999999  999999999998888777777


Q ss_pred             hhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhcc
Q 039630          112 LQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEI  170 (174)
Q Consensus       112 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  170 (174)
                        ++.++..+...+                .....+++..+..++.|++.||.|||++.
T Consensus        79 --e~~~~~~L~~~~----------------~~~~~l~~~~~~~~~~~i~~~l~~lH~~~  119 (254)
T cd06627          79 --EYAENGSLRQII----------------KKFGPFPESLVAVYVYQVLQGLAYLHEQG  119 (254)
T ss_pred             --ecCCCCcHHHHH----------------HhccCCCHHHHHHHHHHHHHHHHHHhhCC
Confidence              666655554422                11135788999999999999999999864

Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast

>cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase

Probab=99.44  E-value=1.1e-12  Score=93.50  Aligned_cols=109  Identities=21%  Similarity=0.225  Sum_probs=87.8

Q ss_pred             ecccCCeeEEEEEE-cCCCEEEEEEeeccC---ccchhHHHHHHHHHhcccccCCCeeeeecceecCCCcccchhhhhhh
Q 039630           42 IGEGGFGSVYKGRL-EDGTVVAVNVLSVES---KQGETEFMSEVASMANINICHENLVKLHGGCIDGPSRILAPLQASIE  117 (174)
Q Consensus        42 lg~G~~g~V~~~~~-~~~~~~avK~~~~~~---~~~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~~~~~~~lv~~~~~~~  117 (174)
                      ||.|++|.||++.. .++..+++|++....   ......+.+|+.+++.++  |+|++++++.+...+..++++  ++.+
T Consensus         1 lg~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~--h~~i~~~~~~~~~~~~~~lv~--e~~~   76 (262)
T cd05572           1 LGVGGFGRVELVKVKSKNRTFALKCVKKRHIVETGQQEHIFSEKEILEECN--HPFIVKLYRTFKDKKYIYMLM--EYCL   76 (262)
T ss_pred             CCCCCceEEEEEEECCCCcEEEEEEEehhcchhhhHHHHHHHHHHHHHhCC--CCCEeeeeeeEEcCCccEEEE--ecCC
Confidence            68999999999994 458899999997542   234567889999999999  999999999999888888888  7766


Q ss_pred             hhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhcc
Q 039630          118 ALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEI  170 (174)
Q Consensus       118 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  170 (174)
                      ++.+...+.                ....+++..+..++.|++.||.|||++.
T Consensus        77 ~~~L~~~l~----------------~~~~l~~~~~~~~~~~i~~~l~~lH~~~  113 (262)
T cd05572          77 GGELWTILR----------------DRGLFDEYTARFYIACVVLAFEYLHNRG  113 (262)
T ss_pred             CCcHHHHHh----------------hcCCCCHHHHHHHHHHHHHHHHHHhhCC
Confidence            676665431                1223678888899999999999999864

Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi

>KOG4721 consensus Serine/threonine protein kinase, contains leucine zipper domain [Signal transduction mechanisms]

Probab=99.44  E-value=8e-14  Score=105.98  Aligned_cols=113  Identities=22%  Similarity=0.349  Sum_probs=86.2

Q ss_pred             HHhhcCCeeecceecccCCeeEEEEEEcCCCEEEEEEeeccCccchhHHHHHHHHHhcccccCCCeeeeecceecCCCcc
Q 039630           29 LKIATNGFRTSNKIGEGGFGSVYKGRLEDGTVVAVNVLSVESKQGETEFMSEVASMANINICHENLVKLHGGCIDGPSRI  108 (174)
Q Consensus        29 ~~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~avK~~~~~~~~~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~~~~~~~  108 (174)
                      |.++-..+.-+++||.|+-|.||.|.+. +..||||.++.-       -..+|.-|++|+  |+||+.|.|+|...+-.+
T Consensus       119 WeiPFe~IsELeWlGSGaQGAVF~Grl~-netVAVKKV~el-------kETdIKHLRkLk--H~NII~FkGVCtqsPcyC  188 (904)
T KOG4721|consen  119 WEIPFEEISELEWLGSGAQGAVFLGRLH-NETVAVKKVREL-------KETDIKHLRKLK--HPNIITFKGVCTQSPCYC  188 (904)
T ss_pred             ccCCHHHhhhhhhhccCcccceeeeecc-CceehhHHHhhh-------hhhhHHHHHhcc--CcceeeEeeeecCCceeE
Confidence            3333334455689999999999999986 667999987522       134567789999  999999999999887777


Q ss_pred             cchhhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhc
Q 039630          109 LAPLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEE  169 (174)
Q Consensus       109 lv~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~  169 (174)
                      ++|  +|+..+.|..-+                .....+....++.+..+||.||.|||.+
T Consensus       189 IiM--EfCa~GqL~~VL----------------ka~~~itp~llv~Wsk~IA~GM~YLH~h  231 (904)
T KOG4721|consen  189 IIM--EFCAQGQLYEVL----------------KAGRPITPSLLVDWSKGIAGGMNYLHLH  231 (904)
T ss_pred             Eee--eccccccHHHHH----------------hccCccCHHHHHHHHHHhhhhhHHHHHh
Confidence            777  666666666522                2233577788889999999999999875

>cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3

Probab=99.44  E-value=1.1e-12  Score=97.67  Aligned_cols=116  Identities=17%  Similarity=0.198  Sum_probs=85.7

Q ss_pred             hcCCeeecceecccCCeeEEEEE-EcCCCEEEEEEeecc--CccchhHHHHHHHHHhcccccCCCeeeeecceecCC---
Q 039630           32 ATNGFRTSNKIGEGGFGSVYKGR-LEDGTVVAVNVLSVE--SKQGETEFMSEVASMANINICHENLVKLHGGCIDGP---  105 (174)
Q Consensus        32 ~~~~~~~~~~lg~G~~g~V~~~~-~~~~~~~avK~~~~~--~~~~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~~~~---  105 (174)
                      ..++|...+.||+|+||.||++. ...+..+|+|.+...  .......+.+|+.+++.++  |+||+++++.+....   
T Consensus        15 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~--h~niv~~~~~~~~~~~~~   92 (355)
T cd07874          15 VLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVN--HKNIISLLNVFTPQKSLE   92 (355)
T ss_pred             hhhceeEEEEeeecCCEEEEEEEecCCCceEEEEEeCCcccChHHHHHHHHHHHHHHHhC--CCchhceeeeeecccccc
Confidence            34679999999999999999998 456889999999754  2233456788999999999  999999999886543   


Q ss_pred             ---CcccchhhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhcc
Q 039630          106 ---SRILAPLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEI  170 (174)
Q Consensus       106 ---~~~lv~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  170 (174)
                         ..++++  ++.+.. +...+                  ...+++..+..++.|++.||+|||++.
T Consensus        93 ~~~~~~lv~--e~~~~~-l~~~~------------------~~~l~~~~~~~~~~qi~~aL~~LH~~g  139 (355)
T cd07874          93 EFQDVYLVM--ELMDAN-LCQVI------------------QMELDHERMSYLLYQMLCGIKHLHSAG  139 (355)
T ss_pred             ccceeEEEh--hhhccc-HHHHH------------------hhcCCHHHHHHHHHHHHHHHHHHHhCC
Confidence               234555  433322 11111                  113677888889999999999999864

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok

>cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein

Probab=99.44  E-value=1.5e-12  Score=94.31  Aligned_cols=132  Identities=23%  Similarity=0.288  Sum_probs=92.7

Q ss_pred             CeeecceecccCCeeEEEEEEc------CCCEEEEEEeeccC-ccchhHHHHHHHHHhcccccCCCeeeeecceecCCCc
Q 039630           35 GFRTSNKIGEGGFGSVYKGRLE------DGTVVAVNVLSVES-KQGETEFMSEVASMANINICHENLVKLHGGCIDGPSR  107 (174)
Q Consensus        35 ~~~~~~~lg~G~~g~V~~~~~~------~~~~~avK~~~~~~-~~~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~~~~~~  107 (174)
                      +|++.+.||+|+||.||+|...      ....+++|.+.... ......+.+|+.+++.++  |+||+++++.+...+..
T Consensus         1 ~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~--h~~iv~~~~~~~~~~~~   78 (290)
T cd05045           1 NLVLGKTLGEGEFGKVVKATAFRLKGRAGYTTVAVKMLKENASSSELRDLLSEFNLLKQVN--HPHVIKLYGACSQDGPL   78 (290)
T ss_pred             CccccccccCcCCcceEEEEEecCCCCCcceeEEEEecCCCCCHHHHHHHHHHHHHHhhCC--CCCEeeEEEEEecCCCc
Confidence            3677789999999999999832      23568888886442 233457889999999999  99999999999888888


Q ss_pred             ccchhhhhhhhhhhhhhhhcccceeeeee--------ecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhcc
Q 039630          108 ILAPLQASIEALFLFTKLWKMDKFISIYV--------VSGSKKNRVKFNWIARREIALGIARGLAYIHEEI  170 (174)
Q Consensus       108 ~lv~~~~~~~~~~l~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  170 (174)
                      ++++  ++..++.+...+...........        ..........+++..++.++.|++.||.|||++.
T Consensus        79 ~lv~--e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~  147 (290)
T cd05045          79 LLIV--EYAKYGSLRSFLRESRKVGPSYLGSDGNRNSSYLDNPDERALTMGDLISFAWQISRGMQYLAEMK  147 (290)
T ss_pred             EEEE--EecCCCCHHHHHHhcCCccccccccccccccccccCccccccCHHHHHHHHHHHHHHHHHHHHCC
Confidence            8888  66666666543322111100000        0000112235788999999999999999999754

Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi

>cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases

Probab=99.44  E-value=1.5e-12  Score=93.29  Aligned_cols=128  Identities=23%  Similarity=0.337  Sum_probs=89.1

Q ss_pred             ceecccCCeeEEEEEEc-CCC--EEEEEEeeccC-ccchhHHHHHHHHHhcccccCCCeeeeecceecCCCcccchhhhh
Q 039630           40 NKIGEGGFGSVYKGRLE-DGT--VVAVNVLSVES-KQGETEFMSEVASMANINICHENLVKLHGGCIDGPSRILAPLQAS  115 (174)
Q Consensus        40 ~~lg~G~~g~V~~~~~~-~~~--~~avK~~~~~~-~~~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~~~~~~~lv~~~~~  115 (174)
                      +.||+|+||.||++... ++.  .+++|.++... ......+..|+.++.++. .|+|++++++.+...+..++++  ++
T Consensus         1 ~~lg~g~~g~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~-~h~~iv~~~~~~~~~~~~~lv~--e~   77 (270)
T cd05047           1 DVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLG-HHPNIINLLGACEHRGYLYLAI--EY   77 (270)
T ss_pred             CcCCCCCCceEEEEEEcCCCCeeEEEEEEccccCCHHHHHHHHHHHHHHHhhc-cCCCeeeEEEEEecCCCceEEE--Ee
Confidence            36899999999999853 443  46888876432 334567889999999993 3999999999999888888888  77


Q ss_pred             hhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhcc
Q 039630          116 IEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEI  170 (174)
Q Consensus       116 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  170 (174)
                      ..++.+...+........-............+++..+..++.|++.||+|||++.
T Consensus        78 ~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~al~~lH~~~  132 (270)
T cd05047          78 APHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQ  132 (270)
T ss_pred             CCCCcHHHHHHhccccccccccccccCCcCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            7767666544322211100000000112235788999999999999999999853

Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l

>cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1

Probab=99.44  E-value=1.3e-12  Score=96.36  Aligned_cols=118  Identities=21%  Similarity=0.234  Sum_probs=88.9

Q ss_pred             hhcCCeeecceecccCCeeEEEEE-EcCCCEEEEEEeecc--CccchhHHHHHHHHHhcccccCCCeeeeecceec-CCC
Q 039630           31 IATNGFRTSNKIGEGGFGSVYKGR-LEDGTVVAVNVLSVE--SKQGETEFMSEVASMANINICHENLVKLHGGCID-GPS  106 (174)
Q Consensus        31 ~~~~~~~~~~~lg~G~~g~V~~~~-~~~~~~~avK~~~~~--~~~~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~~-~~~  106 (174)
                      ...++|...+.||+|+||.||++. ..++..+++|.+...  .......+..|+.++..++  |||++++.+.+.. ...
T Consensus         7 ~~~~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~--hpniv~~~~~~~~~~~~   84 (328)
T cd07856           7 EITNRYVDLQPVGMGAFGLVCSARDQLTGQNVAIKKIMKPFSTPVLAKRTYRELKLLKHLR--HENIISLSDIFISPLED   84 (328)
T ss_pred             ccccceEEEEeecccCCeEEEEEEECCCCCEEEEEEecccccccchhHHHHHHHHHHHhcC--CCCeeeEeeeEecCCCc
Confidence            356789999999999999999998 557899999988643  2234566788999999999  9999999998865 345


Q ss_pred             cccchhhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhcc
Q 039630          107 RILAPLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEI  170 (174)
Q Consensus       107 ~~lv~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  170 (174)
                      .++++  ++.. ..+...+                 ....++...+..++.|++.||.|||+..
T Consensus        85 ~~lv~--e~~~-~~L~~~~-----------------~~~~~~~~~~~~~~~ql~~aL~~LH~~~  128 (328)
T cd07856          85 IYFVT--ELLG-TDLHRLL-----------------TSRPLEKQFIQYFLYQILRGLKYVHSAG  128 (328)
T ss_pred             EEEEe--ehhc-cCHHHHH-----------------hcCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            66666  4432 2222211                 1123677777889999999999999864

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U

>cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1

Probab=99.44  E-value=1.2e-12  Score=94.82  Aligned_cols=117  Identities=23%  Similarity=0.244  Sum_probs=91.3

Q ss_pred             CeeecceecccCCeeEEEEEE----cCCCEEEEEEeeccC----ccchhHHHHHHHHHhcccccCCCeeeeecceecCCC
Q 039630           35 GFRTSNKIGEGGFGSVYKGRL----EDGTVVAVNVLSVES----KQGETEFMSEVASMANINICHENLVKLHGGCIDGPS  106 (174)
Q Consensus        35 ~~~~~~~lg~G~~g~V~~~~~----~~~~~~avK~~~~~~----~~~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~~~~~  106 (174)
                      +|++.+.||.|+||.||.+..    .+|..+|+|+++...    ......+..|+.++..+. .|+||+.+++.+.....
T Consensus         1 ~y~~~~~lg~G~~g~v~~~~~~~~~~~g~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~-~~~~i~~~~~~~~~~~~   79 (290)
T cd05613           1 NFELLKVLGTGAYGKVFLVRKVSGHDSGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIR-QSPFLVTLHYAFQTDTK   79 (290)
T ss_pred             CceeeeeeccCCcceEEEEEeccCCCCCceEEEEEeehhhhhhcchHHHHHHHHHHHHHhcc-cCCChhceeeEeecCCe
Confidence            367789999999999999884    368899999997542    223456788999999984 48999999999988877


Q ss_pred             cccchhhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhcc
Q 039630          107 RILAPLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEI  170 (174)
Q Consensus       107 ~~lv~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  170 (174)
                      .++++  ++.+++.+...+.                ....+++..+..++.|++.||.|||++.
T Consensus        80 ~~lv~--e~~~~~~L~~~l~----------------~~~~l~~~~~~~~~~qi~~al~~lH~~~  125 (290)
T cd05613          80 LHLIL--DYINGGELFTHLS----------------QRERFKEQEVQIYSGEIVLALEHLHKLG  125 (290)
T ss_pred             EEEEE--ecCCCCcHHHHHH----------------HcCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            77888  7777666655431                1224678888889999999999999854

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph

>cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase

Probab=99.44  E-value=1.3e-12  Score=94.08  Aligned_cols=116  Identities=16%  Similarity=0.248  Sum_probs=86.1

Q ss_pred             eeecceecccCCeeEEEEE-EcCCCEEEEEEeeccC-ccchhHHHHHHHHHhcccccCCCeeeeecceecC--CCcccch
Q 039630           36 FRTSNKIGEGGFGSVYKGR-LEDGTVVAVNVLSVES-KQGETEFMSEVASMANINICHENLVKLHGGCIDG--PSRILAP  111 (174)
Q Consensus        36 ~~~~~~lg~G~~g~V~~~~-~~~~~~~avK~~~~~~-~~~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~~~--~~~~lv~  111 (174)
                      |++.+.||+|+||.||++. ..++..+|+|.++... .........|+.++.++. .|+|++++++.+.+.  +..++++
T Consensus         1 y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~-~h~~i~~~~~~~~~~~~~~~~lv~   79 (282)
T cd07831           1 YKILGKIGEGTFSEVLKAQSRKTGKYYAIKCMKKHFKSLEQVNNLREIQALRRLS-PHPNILRLIEVLFDRKTGRLALVF   79 (282)
T ss_pred             CceEeeccccccceEEEEEEcCCCcEEEEEEehhccCCchhhhHHHHHHHHhhcC-CCCCccceEEEEecCCCCcEEEEE
Confidence            4567899999999999998 5578899999987542 222234457888888774 499999999999887  7777777


Q ss_pred             hhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhcc
Q 039630          112 LQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEI  170 (174)
Q Consensus       112 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  170 (174)
                        ++.+. .+...+.               .....+++..+..++.|++.||.|||+..
T Consensus        80 --e~~~~-~l~~~l~---------------~~~~~~~~~~~~~~~~qi~~~L~~LH~~~  120 (282)
T cd07831          80 --ELMDM-NLYELIK---------------GRKRPLPEKRVKSYMYQLLKSLDHMHRNG  120 (282)
T ss_pred             --ecCCc-cHHHHHH---------------hccCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence              55442 3333221               11235789999999999999999999865

Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation.

>cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase

Probab=99.44  E-value=1.2e-12  Score=93.06  Aligned_cols=118  Identities=21%  Similarity=0.356  Sum_probs=90.5

Q ss_pred             hcCCeeecceecccCCeeEEEEEEcCCCEEEEEEeeccCccchhHHHHHHHHHhcccccCCCeeeeecceec-CCCcccc
Q 039630           32 ATNGFRTSNKIGEGGFGSVYKGRLEDGTVVAVNVLSVESKQGETEFMSEVASMANINICHENLVKLHGGCID-GPSRILA  110 (174)
Q Consensus        32 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~avK~~~~~~~~~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~~-~~~~~lv  110 (174)
                      ...+|.+.+.||+|+||.||++... +..+++|.++..  .....+..|+.+++.++  |+|++++++.+.. .+..+++
T Consensus         4 ~~~~~~~~~~lg~g~~~~v~~~~~~-~~~~~~k~~~~~--~~~~~~~~e~~~l~~l~--~~~i~~~~~~~~~~~~~~~lv   78 (256)
T cd05082           4 NMKELKLLQTIGKGEFGDVMLGDYR-GNKVAVKCIKND--ATAQAFLAEASVMTQLR--HSNLVQLLGVIVEEKGGLYIV   78 (256)
T ss_pred             cHHhCeeeeeecccCCCeEEEEEEc-CCcEEEEEeCCC--chHHHHHHHHHHHHhCC--CCCeeeEEEEEEcCCCceEEE
Confidence            3457888899999999999999764 778999998643  23557889999999999  9999999997654 4556677


Q ss_pred             hhhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhcc
Q 039630          111 PLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEI  170 (174)
Q Consensus       111 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  170 (174)
                      +  ++.+++.+...+..              .....+++..++.++.|++.||+|||++.
T Consensus        79 ~--e~~~~~~L~~~~~~--------------~~~~~~~~~~~~~~~~~i~~~l~~lH~~~  122 (256)
T cd05082          79 T--EYMAKGSLVDYLRS--------------RGRSVLGGDCLLKFSLDVCEAMEYLEANN  122 (256)
T ss_pred             E--ECCCCCcHHHHHHh--------------cCCCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            7  66666666553311              11224688888999999999999999864

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re

>cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1

Probab=99.44  E-value=6.3e-13  Score=95.44  Aligned_cols=118  Identities=19%  Similarity=0.211  Sum_probs=94.1

Q ss_pred             CCeeecceecccCCeeEEEEE-EcCCCEEEEEEeeccC---ccchhHHHHHHHHHhcccccCCCeeeeecceecCCCccc
Q 039630           34 NGFRTSNKIGEGGFGSVYKGR-LEDGTVVAVNVLSVES---KQGETEFMSEVASMANINICHENLVKLHGGCIDGPSRIL  109 (174)
Q Consensus        34 ~~~~~~~~lg~G~~g~V~~~~-~~~~~~~avK~~~~~~---~~~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~~~~~~~l  109 (174)
                      ++|.+.+.||.|+||.||++. ..++..+++|++....   ......+..|+.++.++. .|+|++++++.+...+..++
T Consensus         1 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~~~~l~-~~~~i~~~~~~~~~~~~~~l   79 (280)
T cd05581           1 DDFKFGKIIGEGSFSTVVLAKEKETNKEYAIKILDKRQLIKEKKVKYVKIEKEVLTRLN-GHPGIIKLYYTFQDEENLYF   79 (280)
T ss_pred             CCceEeeeecCCCceEEEEEEEcCCCCEEEEEEechHhccchHHHHHHHHHHHHHHhcc-cCCCchhHHHHhcCCceEEE
Confidence            368888999999999999999 4578999999997532   223456788888888875 59999999999988888888


Q ss_pred             chhhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhcc
Q 039630          110 APLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEI  170 (174)
Q Consensus       110 v~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  170 (174)
                      ++  ++.+++.+...+.                ....+++..+..++.|++.||.|||++.
T Consensus        80 v~--e~~~~~~L~~~l~----------------~~~~l~~~~~~~i~~ql~~~l~~Lh~~~  122 (280)
T cd05581          80 VL--EYAPNGELLQYIR----------------KYGSLDEKCTRFYAAEILLALEYLHSKG  122 (280)
T ss_pred             EE--cCCCCCcHHHHHH----------------HcCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            88  6666666655331                1225789999999999999999999864

Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto

>cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4

Probab=99.43  E-value=1.9e-12  Score=92.00  Aligned_cols=118  Identities=19%  Similarity=0.235  Sum_probs=89.9

Q ss_pred             CeeecceecccCCeeEEEEE-EcCCCEEEEEEeeccC--ccchhHHHHHHHHHhcccccCCCeeeeecceecCC-Ccccc
Q 039630           35 GFRTSNKIGEGGFGSVYKGR-LEDGTVVAVNVLSVES--KQGETEFMSEVASMANINICHENLVKLHGGCIDGP-SRILA  110 (174)
Q Consensus        35 ~~~~~~~lg~G~~g~V~~~~-~~~~~~~avK~~~~~~--~~~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~~~~-~~~lv  110 (174)
                      +|++.+.||+|++|.||.+. ..+++.+++|.+....  ....+.+..|+.+++.++  |+|++++.+.+...+ ..+++
T Consensus         1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~--~~~i~~~~~~~~~~~~~~~lv   78 (257)
T cd08223           1 AYCFVRVVGKGSYGEVSLVRHRTDGKQYVIKKLNLRNASRRERKAAEQEAQLLSQLK--HPNIVAYRESWEGEDGLLYIV   78 (257)
T ss_pred             CceEEEEecCCCCeEEEEEEEcCCCcEEEEEEEehhhcCHHHHHHHHHHHHHHHhCC--CCCeeeeeeeecCCCCEEEEE
Confidence            47888999999999999998 5567899999997542  234556888999999999  999999998875433 45666


Q ss_pred             hhhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhcc
Q 039630          111 PLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEI  170 (174)
Q Consensus       111 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  170 (174)
                      +  ++.+++.+...+..              .....+++..+..++.|++.|++|||++.
T Consensus        79 ~--e~~~~~~l~~~l~~--------------~~~~~l~~~~~~~~~~~l~~~l~~lH~~~  122 (257)
T cd08223          79 M--GFCEGGDLYHKLKE--------------QKGKLLPENQVVEWFVQIAMALQYLHEKH  122 (257)
T ss_pred             e--cccCCCcHHHHHHH--------------hcCCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            6  66665555443311              11234788999999999999999999864

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown.

>cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2

Probab=99.43  E-value=8.1e-13  Score=94.68  Aligned_cols=114  Identities=22%  Similarity=0.309  Sum_probs=83.8

Q ss_pred             eecccCCeeEEEEEEcCC---CEEEEEEeeccC-ccchhHHHHHHHHHhcccccCCCeeeeecceecCCCcccchhhhhh
Q 039630           41 KIGEGGFGSVYKGRLEDG---TVVAVNVLSVES-KQGETEFMSEVASMANINICHENLVKLHGGCIDGPSRILAPLQASI  116 (174)
Q Consensus        41 ~lg~G~~g~V~~~~~~~~---~~~avK~~~~~~-~~~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~~~~~~~lv~~~~~~  116 (174)
                      .||+|+||.||++...++   ..+++|.++... ......+.+|+.+++.++  |||++++++.+......++++  ++.
T Consensus         2 ~lg~G~~g~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~--h~~iv~~~~~~~~~~~~~lv~--e~~   77 (268)
T cd05086           2 EIGNGWFGKVLLSEIYTDTGVARVVVKELKANASSKEQNEFLQQGDPYRILQ--HPNILQCLGQCVEAIPYLLVF--EYC   77 (268)
T ss_pred             cCCCCcCceEEEEEEEcCCCcceEEEEEecCCCChHHHHHHHHHHHHHhccC--CcchhheEEEecCCCccEEEE--ecC
Confidence            589999999999974333   345566665432 234567899999999998  999999999999888888888  777


Q ss_pred             hhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhcc
Q 039630          117 EALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEI  170 (174)
Q Consensus       117 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  170 (174)
                      +++.+...+....            ......+...+..++.|++.||+|||+..
T Consensus        78 ~~~~L~~~l~~~~------------~~~~~~~~~~~~~~~~~i~~al~~lH~~~  119 (268)
T cd05086          78 ELGDLKSYLSQEQ------------WHRRNSQLLLLQRMACEIAAGVTHMHKHN  119 (268)
T ss_pred             CCCcHHHHHHhhh------------cccccccHHHHHHHHHHHHHHHHHHHHCC
Confidence            7666655432110            11123566777889999999999999854

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage

>cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains

Probab=99.43  E-value=5.5e-13  Score=94.57  Aligned_cols=120  Identities=26%  Similarity=0.384  Sum_probs=93.9

Q ss_pred             CeeecceecccCCeeEEEEE-EcCCCEEEEEEeeccC--ccchhHHHHHHHHHhcccccCCCeeeeecceecCCCcccch
Q 039630           35 GFRTSNKIGEGGFGSVYKGR-LEDGTVVAVNVLSVES--KQGETEFMSEVASMANINICHENLVKLHGGCIDGPSRILAP  111 (174)
Q Consensus        35 ~~~~~~~lg~G~~g~V~~~~-~~~~~~~avK~~~~~~--~~~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~~~~~~~lv~  111 (174)
                      +|++.+.||+|+||.||++. ..++..+++|.++...  ......+..|+.+++.++  |+|++++.+.+......++++
T Consensus         1 ~y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~--~~~i~~~~~~~~~~~~~~~v~   78 (256)
T cd08530           1 DFKVLKKLGKGSYGSVYKVKRLSDNQFYALKEVDLGSMSQKEREDAVNEIRILASVN--HPNIISYKEAFLDGNKLCIVM   78 (256)
T ss_pred             CceEeeeecCCCceeEEEEEECCCCCEEEEEEEehhhccHHHHHHHHHHHHHHHhCC--CCCchhhhhhhccCCEEEEEe
Confidence            47788999999999999988 5578899999997542  334556788999999999  999999999999888888888


Q ss_pred             hhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhcc
Q 039630          112 LQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEI  170 (174)
Q Consensus       112 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  170 (174)
                        ++.++..+...+...            ......+++..+..++.|++.||+|||+..
T Consensus        79 --e~~~~~~L~~~~~~~------------~~~~~~~~~~~~~~~~~~l~~al~~lh~~~  123 (256)
T cd08530          79 --EYAPFGDLSKAISKR------------KKKRKLIPEQEIWRIFIQLLRGLQALHEQK  123 (256)
T ss_pred             --hhcCCCCHHHHHHHH------------HhhcCCCCHHHHHHHHHHHHHHHHHHhhCC
Confidence              666666655433221            111235788888999999999999999864

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an

>cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases

Probab=99.43  E-value=1.5e-12  Score=92.51  Aligned_cols=120  Identities=29%  Similarity=0.490  Sum_probs=90.9

Q ss_pred             ceecccCCeeEEEEEEc-C---CCEEEEEEeeccCcc-chhHHHHHHHHHhcccccCCCeeeeecceecCCCcccchhhh
Q 039630           40 NKIGEGGFGSVYKGRLE-D---GTVVAVNVLSVESKQ-GETEFMSEVASMANINICHENLVKLHGGCIDGPSRILAPLQA  114 (174)
Q Consensus        40 ~~lg~G~~g~V~~~~~~-~---~~~~avK~~~~~~~~-~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~~~~~~~lv~~~~  114 (174)
                      +.||+|+||.||++... .   +..+++|.++..... ....+.+|+.++..++  |+|++++++.+......++++  +
T Consensus         1 ~~ig~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~--~~~i~~~~~~~~~~~~~~lv~--e   76 (262)
T cd00192           1 KKLGEGAFGEVYKGKLKGKDGKTTEVAVKTLKEDASEEERKDFLKEARVMKKLG--HPNVVRLLGVCTEEEPLYLVL--E   76 (262)
T ss_pred             CccccCCceEEEEEEEecCCCCCceEEeEeeccccchhHHHHHHHHHHHHhhcC--CCChheeeeeecCCCceEEEE--E
Confidence            46899999999999943 3   778999999765333 3677899999999999  999999999999888888888  6


Q ss_pred             hhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhcc
Q 039630          115 SIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEI  170 (174)
Q Consensus       115 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  170 (174)
                      +.+.+.+...+.......       .......+++..+..++.|++.||.|||++.
T Consensus        77 ~~~~~~L~~~l~~~~~~~-------~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~  125 (262)
T cd00192          77 YMEGGDLLDYLRKSRPVF-------PSPEKSTLSLKDLLSFAIQIAKGMEYLASKK  125 (262)
T ss_pred             eccCCcHHHHHhhccccc-------cccccccCCHHHHHHHHHHHHHHHHHHHcCC
Confidence            666666665432110000       0011245789999999999999999999854

Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan

>cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1

Probab=99.43  E-value=1.4e-12  Score=95.78  Aligned_cols=116  Identities=24%  Similarity=0.342  Sum_probs=89.8

Q ss_pred             CeeecceecccCCeeEEEEE-EcCCCEEEEEEeeccC---ccchhHHHHHHHHHhcccccCCCeeeeecceecCCCcccc
Q 039630           35 GFRTSNKIGEGGFGSVYKGR-LEDGTVVAVNVLSVES---KQGETEFMSEVASMANINICHENLVKLHGGCIDGPSRILA  110 (174)
Q Consensus        35 ~~~~~~~lg~G~~g~V~~~~-~~~~~~~avK~~~~~~---~~~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~~~~~~~lv  110 (174)
                      .|...+.||+|+||.||++. ..++..+++|.+....   .+....+.+|+.+++.++  |+|++++.+.+...+..+++
T Consensus        26 ~f~~~~~lg~G~~~~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~~e~~~l~~l~--h~~iv~~~~~~~~~~~~~lv  103 (317)
T cd06635          26 LFTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVKFLQRIK--HPNSIEYKGCYLREHTAWLV  103 (317)
T ss_pred             hhhhhheeccCCCeEEEEEEEcCCCcEEEEEEEecCCCCchHHHHHHHHHHHHHHhCC--CCCEEEEEEEEeeCCeEEEE
Confidence            47778899999999999998 4568899999987442   223456888999999999  99999999999988888888


Q ss_pred             hhhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhcc
Q 039630          111 PLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEI  170 (174)
Q Consensus       111 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  170 (174)
                      +  ++..+ .+...+.               .....+++..+..++.|++.||.|||++.
T Consensus       104 ~--e~~~g-~l~~~~~---------------~~~~~l~~~~~~~i~~~i~~~l~~lH~~~  145 (317)
T cd06635         104 M--EYCLG-SASDLLE---------------VHKKPLQEVEIAAITHGALQGLAYLHSHN  145 (317)
T ss_pred             E--eCCCC-CHHHHHH---------------HhcCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            8  54433 2222110               11234788899999999999999999864

Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron

>cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5

Probab=99.43  E-value=1.5e-12  Score=96.18  Aligned_cols=116  Identities=17%  Similarity=0.257  Sum_probs=88.2

Q ss_pred             CCeeecceecccCCeeEEEEE-EcCCCEEEEEEeeccC--ccchhHHHHHHHHHhcccccCCCeeeeecceecC----CC
Q 039630           34 NGFRTSNKIGEGGFGSVYKGR-LEDGTVVAVNVLSVES--KQGETEFMSEVASMANINICHENLVKLHGGCIDG----PS  106 (174)
Q Consensus        34 ~~~~~~~~lg~G~~g~V~~~~-~~~~~~~avK~~~~~~--~~~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~~~----~~  106 (174)
                      .+|++.+.||+|+||.||++. ..++..+++|.+....  ......+.+|+.+++.++  |+||+++.+.+...    ..
T Consensus         5 ~~y~~~~~lg~g~~g~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~--h~~iv~~~~~~~~~~~~~~~   82 (334)
T cd07855           5 SRYKPIENIGSGAYGVVCSAIDTRSGKKVAIKKIPHAFDVPTLAKRTLRELKILRHFK--HDNIIAIRDILRPPGADFKD   82 (334)
T ss_pred             hceeeeeeeecCCCeEEEEEEEcCCCCEEEEEEeccccccccchHHHHHHHHHHHhcC--CCCccCHHHhccccCCCCce
Confidence            578889999999999999999 5678999999987542  234566788999999999  99999999887543    34


Q ss_pred             cccchhhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhcc
Q 039630          107 RILAPLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEI  170 (174)
Q Consensus       107 ~~lv~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  170 (174)
                      .++++  ++..+ .+...+                .....+++..+..++.|++.||+|||++.
T Consensus        83 ~~lv~--e~~~~-~l~~~~----------------~~~~~~~~~~~~~i~~qi~~aL~~LH~~~  127 (334)
T cd07855          83 VYVVM--DLMES-DLHHII----------------HSDQPLTEEHIRYFLYQLLRGLKYIHSAN  127 (334)
T ss_pred             EEEEE--ehhhh-hHHHHh----------------ccCCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            55666  54432 332211                11234788999999999999999999854

Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the

>cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase

Probab=99.43  E-value=8.7e-13  Score=93.75  Aligned_cols=112  Identities=28%  Similarity=0.419  Sum_probs=87.1

Q ss_pred             ceecccCCeeEEEEEEcC--C--CEEEEEEeeccCc-cchhHHHHHHHHHhcccccCCCeeeeecceecCCCcccchhhh
Q 039630           40 NKIGEGGFGSVYKGRLED--G--TVVAVNVLSVESK-QGETEFMSEVASMANINICHENLVKLHGGCIDGPSRILAPLQA  114 (174)
Q Consensus        40 ~~lg~G~~g~V~~~~~~~--~--~~~avK~~~~~~~-~~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~~~~~~~lv~~~~  114 (174)
                      +.||+|++|.||++.+..  +  ..+|+|.++.... .....+.+|+.++++++  |+|++++++.+.. ...++++  +
T Consensus         1 ~~ig~g~~~~v~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~--h~~iv~~~~~~~~-~~~~~v~--e   75 (257)
T cd05040           1 KKLGDGSFGVVRRGEWSTSGGKVIPVAVKCLKSDKLSDIMDDFLKEAAIMHSLD--HENLIRLYGVVLT-HPLMMVT--E   75 (257)
T ss_pred             CcCCccCcccEEeeeEecCCCCceEEEEeecCCcccHHHHHHHHHHHHHHhhcC--CCCccceeEEEcC-CeEEEEE--E
Confidence            468999999999998532  3  3689999986644 45667899999999999  9999999999887 6777777  6


Q ss_pred             hhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhcc
Q 039630          115 SIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEI  170 (174)
Q Consensus       115 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  170 (174)
                      +.+.+.+...+...              ....+++.....++.|++.||+|||++.
T Consensus        76 ~~~~~~L~~~l~~~--------------~~~~~~~~~~~~~~~qi~~~L~~lH~~~  117 (257)
T cd05040          76 LAPLGSLLDRLRKD--------------ALGHFLISTLCDYAVQIANGMRYLESKR  117 (257)
T ss_pred             ecCCCcHHHHHHhc--------------ccccCcHHHHHHHHHHHHHHHHHHHhCC
Confidence            66666665543211              0034788999999999999999999864

Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and

>cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase

Probab=99.42  E-value=2.4e-12  Score=91.15  Aligned_cols=115  Identities=23%  Similarity=0.304  Sum_probs=92.0

Q ss_pred             eeecceecccCCeeEEEEEE-cCCCEEEEEEeeccCc--cchhHHHHHHHHHhcccccCCCeeeeecceecC--CCcccc
Q 039630           36 FRTSNKIGEGGFGSVYKGRL-EDGTVVAVNVLSVESK--QGETEFMSEVASMANINICHENLVKLHGGCIDG--PSRILA  110 (174)
Q Consensus        36 ~~~~~~lg~G~~g~V~~~~~-~~~~~~avK~~~~~~~--~~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~~~--~~~~lv  110 (174)
                      |...+.||+|++|.||++.. .++..+++|++.....  ...+.+.+|+.++++++  |+|++++.+.+...  ...+++
T Consensus         2 ~~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~--~~~i~~~~~~~~~~~~~~~~lv   79 (260)
T cd06606           2 WTRGELLGRGSFGSVYLALDKDTGELMAVKSVELSGDSEEELEALEREIRILSSLQ--HPNIVRYYGSERDEEKNTLNIF   79 (260)
T ss_pred             ceeeeEeeecCceEEEEEEECCCCcEEEEEEeeccccchHHHHHHHHHHHHHHHcC--CCCEeeEEEEEecCCCCeEEEE
Confidence            66778999999999999994 4788999999975532  44667889999999999  99999999999887  667777


Q ss_pred             hhhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhcc
Q 039630          111 PLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEI  170 (174)
Q Consensus       111 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  170 (174)
                      +  ++..+..+...+.                ....+++..+..++.|++.||+|||++.
T Consensus        80 ~--e~~~~~~L~~~~~----------------~~~~~~~~~~~~~~~~l~~~l~~lh~~~  121 (260)
T cd06606          80 L--EYVSGGSLSSLLK----------------KFGKLPEPVIRKYTRQILEGLAYLHSNG  121 (260)
T ss_pred             E--EecCCCcHHHHHH----------------HcCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            7  6665555544321                1125788999999999999999999864

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK

>cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases

Probab=99.42  E-value=1.9e-12  Score=95.79  Aligned_cols=116  Identities=20%  Similarity=0.247  Sum_probs=86.6

Q ss_pred             cCCeeecceecccCCeeEEEEE-EcCCCEEEEEEeecc-CccchhHHHHHHHHHhcccccCCCeeeeecceecCC-----
Q 039630           33 TNGFRTSNKIGEGGFGSVYKGR-LEDGTVVAVNVLSVE-SKQGETEFMSEVASMANINICHENLVKLHGGCIDGP-----  105 (174)
Q Consensus        33 ~~~~~~~~~lg~G~~g~V~~~~-~~~~~~~avK~~~~~-~~~~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~~~~-----  105 (174)
                      +++|.+.+.||+|+||.||++. ..++..||+|.++.. .......+..|+.++..++  |+|++++++.+....     
T Consensus         4 ~~~y~i~~~lg~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~--h~niv~~~~~~~~~~~~~~~   81 (336)
T cd07849           4 GPRYQNLSYIGEGAYGMVCSATHKPTGVKVAIKKISPFEHQTFCQRTLREIKILRRFK--HENIIGILDIIRPPSFESFN   81 (336)
T ss_pred             ccceEEEEEEEecCCeEEEEEEEcCCCCeEEEEEecccccchhHHHHHHHHHHHHhCC--CCCcCchhheeecccccccc
Confidence            4679999999999999999998 567899999998643 2234556788999999999  999999998875543     


Q ss_pred             CcccchhhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhcc
Q 039630          106 SRILAPLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEI  170 (174)
Q Consensus       106 ~~~lv~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  170 (174)
                      ..++++  ++... .+...                 .....+++..+..++.|++.||+|||++.
T Consensus        82 ~~~lv~--e~~~~-~l~~~-----------------~~~~~l~~~~~~~i~~ql~~aL~~LH~~~  126 (336)
T cd07849          82 DVYIVQ--ELMET-DLYKL-----------------IKTQHLSNDHIQYFLYQILRGLKYIHSAN  126 (336)
T ss_pred             eEEEEe--hhccc-CHHHH-----------------HhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            234544  33322 12111                 11224788889999999999999999864

Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase

>smart00219 TyrKc Tyrosine kinase, catalytic domain

Probab=99.42  E-value=1.1e-12  Score=92.98  Aligned_cols=116  Identities=32%  Similarity=0.479  Sum_probs=90.3

Q ss_pred             eecceecccCCeeEEEEEEc-C----CCEEEEEEeeccCcc-chhHHHHHHHHHhcccccCCCeeeeecceecCCCcccc
Q 039630           37 RTSNKIGEGGFGSVYKGRLE-D----GTVVAVNVLSVESKQ-GETEFMSEVASMANINICHENLVKLHGGCIDGPSRILA  110 (174)
Q Consensus        37 ~~~~~lg~G~~g~V~~~~~~-~----~~~~avK~~~~~~~~-~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~~~~~~~lv  110 (174)
                      .+.+.||+|+||.||++... .    +..+|+|.++..... ....+..|+.++..++  |+|++++++.+...+..+++
T Consensus         2 ~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~--~~~i~~~~~~~~~~~~~~~i   79 (258)
T smart00219        2 TLGKKLGEGAFGEVYKGTLKGLSGEKEVEVAVKTLKEDADEQQIEEFLREARIMRKLD--HPNIVKLLGVCTEEEPLMIV   79 (258)
T ss_pred             cccceeccCCCcceEEEEecCCCCCCCceEEEEEccCCCChHHHHHHHHHHHHHHhcC--CCchheEEEEEcCCCeeEEE
Confidence            45688999999999999943 2    378999999755332 5668899999999998  99999999999988888888


Q ss_pred             hhhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhcc
Q 039630          111 PLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEI  170 (174)
Q Consensus       111 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  170 (174)
                      +  ++..++.+...+...              ....+++..+..++.|++.||+|||+..
T Consensus        80 ~--e~~~~~~l~~~~~~~--------------~~~~~~~~~~~~~~~ql~~~l~~lh~~~  123 (258)
T smart00219       80 M--EYMEGGDLLDYLRKN--------------RPKELSLSDLLSFALQIARGMEYLESKN  123 (258)
T ss_pred             E--eccCCCCHHHHHHhh--------------hhccCCHHHHHHHHHHHHHHHHHHhcCC
Confidence            7  666665555433110              0111788999999999999999999864

Phosphotransferases. Tyrosine-specific kinase subfamily.

>cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4

Probab=99.42  E-value=6.2e-13  Score=96.55  Aligned_cols=112  Identities=23%  Similarity=0.310  Sum_probs=90.1

Q ss_pred             ecceecccCCeeEEEEE-EcCCCEEEEEEeeccCccchhHHHHHHHHHhcccccCCCeeeeecceecCCCcccchhhhhh
Q 039630           38 TSNKIGEGGFGSVYKGR-LEDGTVVAVNVLSVESKQGETEFMSEVASMANINICHENLVKLHGGCIDGPSRILAPLQASI  116 (174)
Q Consensus        38 ~~~~lg~G~~g~V~~~~-~~~~~~~avK~~~~~~~~~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~~~~~~~lv~~~~~~  116 (174)
                      ....||+|+||.||++. ..++..+++|.+..........+.+|+.+++.++  |+|++++++.+...+..++++  ++.
T Consensus        24 ~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~--h~~iv~~~~~~~~~~~~~lv~--e~~   99 (292)
T cd06657          24 NFIKIGEGSTGIVCIATVKSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQ--HENVVEMYNSYLVGDELWVVM--EFL   99 (292)
T ss_pred             hHHHcCCCCCeEEEEEEEcCCCeEEEEEEecccchhHHHHHHHHHHHHHhcC--CcchhheeeEEEeCCEEEEEE--ecC
Confidence            34689999999999998 4578899999986554445567889999999999  999999999999988888888  666


Q ss_pred             hhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhcc
Q 039630          117 EALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEI  170 (174)
Q Consensus       117 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  170 (174)
                      +.+.+....                 ....+++.....++.|++.||+|||++.
T Consensus       100 ~~~~L~~~~-----------------~~~~~~~~~~~~~~~ql~~~l~~lH~~g  136 (292)
T cd06657         100 EGGALTDIV-----------------THTRMNEEQIAAVCLAVLKALSVLHAQG  136 (292)
T ss_pred             CCCcHHHHH-----------------hcCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            666654422                 1123678888999999999999999853

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo

>cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants

Probab=99.42  E-value=1.7e-12  Score=96.12  Aligned_cols=117  Identities=16%  Similarity=0.264  Sum_probs=87.8

Q ss_pred             cCCeeecceecccCCeeEEEEE-EcCCCEEEEEEeecc--CccchhHHHHHHHHHhcccccCCCeeeeecceecCC----
Q 039630           33 TNGFRTSNKIGEGGFGSVYKGR-LEDGTVVAVNVLSVE--SKQGETEFMSEVASMANINICHENLVKLHGGCIDGP----  105 (174)
Q Consensus        33 ~~~~~~~~~lg~G~~g~V~~~~-~~~~~~~avK~~~~~--~~~~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~~~~----  105 (174)
                      .+.|.+.+.||+|+||.||++. ..++..+++|.++..  .......+..|+.+++.++  |+|++++.+.+....    
T Consensus         4 ~~~y~~~~~lg~G~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~--h~ni~~~~~~~~~~~~~~~   81 (337)
T cd07858           4 DTKYVPIKPIGRGAYGIVCSAKNSETNEKVAIKKIANAFDNRIDAKRTLREIKLLRHLD--HENVIAIKDIMPPPHREAF   81 (337)
T ss_pred             ccceeEEEEeccCCCeEEEEEEecCCCCeEEEEEecccccccchhHHHHHHHHHHHhcC--CCCccchHHheeccccccc
Confidence            3568899999999999999998 567899999998754  2333456778999999998  999999999876543    


Q ss_pred             -CcccchhhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhcc
Q 039630          106 -SRILAPLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEI  170 (174)
Q Consensus       106 -~~~lv~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  170 (174)
                       ..++++  ++.. +.+...+                .....+++..+..++.|++.||.|||++.
T Consensus        82 ~~~~lv~--e~~~-~~L~~~~----------------~~~~~l~~~~~~~i~~qi~~aL~~LH~~~  128 (337)
T cd07858          82 NDVYIVY--ELMD-TDLHQII----------------RSSQTLSDDHCQYFLYQLLRGLKYIHSAN  128 (337)
T ss_pred             CcEEEEE--eCCC-CCHHHHH----------------hcCCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence             245665  4433 2222211                12235788999999999999999999864

Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati

>cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta

Probab=99.42  E-value=1.3e-12  Score=96.32  Aligned_cols=113  Identities=22%  Similarity=0.231  Sum_probs=85.4

Q ss_pred             ceeccc--CCeeEEEEE-EcCCCEEEEEEeeccC--ccchhHHHHHHHHHhcccccCCCeeeeecceecCCCcccchhhh
Q 039630           40 NKIGEG--GFGSVYKGR-LEDGTVVAVNVLSVES--KQGETEFMSEVASMANINICHENLVKLHGGCIDGPSRILAPLQA  114 (174)
Q Consensus        40 ~~lg~G--~~g~V~~~~-~~~~~~~avK~~~~~~--~~~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~~~~~~~lv~~~~  114 (174)
                      ..||+|  +|+.||.+. ..+++.||+|++....  ....+.+.+|+.+++.++  |+||+++++.+...+..++++  +
T Consensus         4 ~~ig~g~~~~~~v~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~--h~niv~~~~~~~~~~~~~~v~--e   79 (328)
T cd08226           4 VEIGRGFCNLTSVYLARHTPTGTLVTVRITDLENCTEEHLKALQNEVVLSHFFR--HPNIMTSWTVFTTGSWLWVIS--P   79 (328)
T ss_pred             HHhCCcccCceeEEEEEEcCCCcEEEEEEeccccCCHHHHHHHHHHHHHHHhCC--CCCcceEeeeEecCCceEEEE--e
Confidence            355666  899999998 4679999999987542  223467888999999898  999999999999988888887  5


Q ss_pred             hhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhcc
Q 039630          115 SIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEI  170 (174)
Q Consensus       115 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  170 (174)
                      +...+.+...+..              .....+++..+..++.|++.||+|||++.
T Consensus        80 ~~~~~~l~~~l~~--------------~~~~~~~~~~~~~~~~qi~~aL~~lH~~~  121 (328)
T cd08226          80 FMAYGSANSLLKT--------------YFPEGMSEALIGNILFGALRGLNYLHQNG  121 (328)
T ss_pred             cccCCCHHHHHHh--------------hcccCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            5555554432211              01123788888899999999999999854

Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig

>cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase

Probab=99.42  E-value=1.3e-12  Score=92.94  Aligned_cols=109  Identities=24%  Similarity=0.352  Sum_probs=82.3

Q ss_pred             eecccCCeeEEEEEE---cCCCEEEEEEeeccC--ccchhHHHHHHHHHhcccccCCCeeeeecceecCCCcccchhhhh
Q 039630           41 KIGEGGFGSVYKGRL---EDGTVVAVNVLSVES--KQGETEFMSEVASMANINICHENLVKLHGGCIDGPSRILAPLQAS  115 (174)
Q Consensus        41 ~lg~G~~g~V~~~~~---~~~~~~avK~~~~~~--~~~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~~~~~~~lv~~~~~  115 (174)
                      .||+|+||.||+|.+   .++..+|+|+++...  ....+.+..|+.+++.++  |+|++++++.+.. +..++++  ++
T Consensus         2 ~lg~G~~g~v~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~--h~~i~~~~~~~~~-~~~~lv~--e~   76 (257)
T cd05116           2 ELGSGNFGTVKKGMYKMKKSEKTVAVKILKNDNNDPALKDELLREANVMQQLD--NPYIVRMIGICEA-ESWMLVM--EL   76 (257)
T ss_pred             cCCCcCCcceEEeEEecCCCceEEEEEEccCCCCcHHHHHHHHHHHHHHHhCC--CCCcceEEEEEcC-CCcEEEE--ec
Confidence            589999999999974   357789999987542  233567889999999998  9999999998754 4455666  55


Q ss_pred             hhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhcc
Q 039630          116 IEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEI  170 (174)
Q Consensus       116 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  170 (174)
                      .+.+.+...+                .....+++.....++.|++.||+|||++.
T Consensus        77 ~~~~~L~~~l----------------~~~~~~~~~~~~~i~~qi~~al~~lH~~~  115 (257)
T cd05116          77 AELGPLNKFL----------------QKNKHVTEKNITELVHQVSMGMKYLEETN  115 (257)
T ss_pred             CCCCcHHHHH----------------HhcCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            5555554422                11224788889999999999999999864

Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio

>cd05122 PKc_STE Catalytic domain of STE family Protein Kinases

Probab=99.42  E-value=3.2e-12  Score=90.13  Aligned_cols=117  Identities=26%  Similarity=0.390  Sum_probs=94.0

Q ss_pred             CeeecceecccCCeeEEEEEE-cCCCEEEEEEeeccCccchhHHHHHHHHHhcccccCCCeeeeecceecCCCcccchhh
Q 039630           35 GFRTSNKIGEGGFGSVYKGRL-EDGTVVAVNVLSVESKQGETEFMSEVASMANINICHENLVKLHGGCIDGPSRILAPLQ  113 (174)
Q Consensus        35 ~~~~~~~lg~G~~g~V~~~~~-~~~~~~avK~~~~~~~~~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~~~~~~~lv~~~  113 (174)
                      +|...+.||+|++|.||++.. .++..+++|.+..........+.+|+.+++.+.  |++++++.+.+...+..++++  
T Consensus         1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~--~~~i~~~~~~~~~~~~~~l~~--   76 (253)
T cd05122           1 LFEILEKIGKGGFGEVYKARHKRTGKEVAIKVIKLESKEKKEKIINEIQILKKCK--HPNIVKYYGSYLKKDELWIVM--   76 (253)
T ss_pred             CceeeeeeccCCceEEEEEEECCCCcEEEEEEecccchhHHHHHHHHHHHHHhCC--CCCEeEEEEEEecCCeEEEEE--
Confidence            367778999999999999995 468899999997664445678899999999999  999999999998888888877  


Q ss_pred             hhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhcc
Q 039630          114 ASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEI  170 (174)
Q Consensus       114 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  170 (174)
                      ++.++..+...+.               .....+++..+..++.|++.+|+|||++.
T Consensus        77 e~~~~~~L~~~~~---------------~~~~~~~~~~~~~i~~~i~~~l~~lh~~~  118 (253)
T cd05122          77 EFCSGGSLKDLLK---------------STNQTLTESQIAYVCKELLKGLEYLHSNG  118 (253)
T ss_pred             ecCCCCcHHHHHh---------------hcCCCCCHHHHHHHHHHHHHHHHHhhcCC
Confidence            6666555554321               11135788999999999999999999853

Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core

>cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase

Probab=99.41  E-value=1.3e-12  Score=94.41  Aligned_cols=115  Identities=22%  Similarity=0.282  Sum_probs=92.2

Q ss_pred             CeeecceecccCCeeEEEEE-EcCCCEEEEEEeeccCccchhHHHHHHHHHhcccccCCCeeeeecceecCCCcccchhh
Q 039630           35 GFRTSNKIGEGGFGSVYKGR-LEDGTVVAVNVLSVESKQGETEFMSEVASMANINICHENLVKLHGGCIDGPSRILAPLQ  113 (174)
Q Consensus        35 ~~~~~~~lg~G~~g~V~~~~-~~~~~~~avK~~~~~~~~~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~~~~~~~lv~~~  113 (174)
                      .|.....||+|++|.||++. ..++..+++|.++.........+.+|+.+++.++  |+|++++++.+...+..++++  
T Consensus        20 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~e~~~l~~~~--h~~vv~~~~~~~~~~~~~~v~--   95 (285)
T cd06648          20 YLDNFVKIGEGSTGIVCIATDKSTGRQVAVKKMDLRKQQRRELLFNEVVIMRDYQ--HPNIVEMYSSYLVGDELWVVM--   95 (285)
T ss_pred             hhhcceEeccCCCeEEEEEEECCCCCEEEEEEEeccchhHHHHHHHHHHHHHHcC--CCChheEEEEEEcCCeEEEEE--
Confidence            34445799999999999998 4578899999987554445566889999999999  999999999998888888888  


Q ss_pred             hhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhcc
Q 039630          114 ASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEI  170 (174)
Q Consensus       114 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  170 (174)
                      ++..++.+...+.                 ...+++..+..++.|++.||+|||++.
T Consensus        96 e~~~~~~L~~~~~-----------------~~~~~~~~~~~~~~ql~~~l~~lH~~~  135 (285)
T cd06648          96 EFLEGGALTDIVT-----------------HTRMNEEQIATVCLAVLKALSFLHAQG  135 (285)
T ss_pred             eccCCCCHHHHHH-----------------hCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            6666666554321                 124678888899999999999999864

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun

>KOG4717 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.41  E-value=3.5e-13  Score=101.61  Aligned_cols=116  Identities=22%  Similarity=0.243  Sum_probs=97.1

Q ss_pred             CCeeecceecccCCeeEEEEE-EcCCCEEEEEEeeccCcc--chhHHHHHHHHHhcccccCCCeeeeecceecCCCcccc
Q 039630           34 NGFRTSNKIGEGGFGSVYKGR-LEDGTVVAVNVLSVESKQ--GETEFMSEVASMANINICHENLVKLHGGCIDGPSRILA  110 (174)
Q Consensus        34 ~~~~~~~~lg~G~~g~V~~~~-~~~~~~~avK~~~~~~~~--~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~~~~~~~lv  110 (174)
                      +=|.+.+.||+|.|+.|-.++ .-+|..||||++.+...+  ....+.+|+..|+-++  ||||+++|.+..++..+|++
T Consensus        18 GLYDLekTlG~GHFAVVKLArHVFTGekVAVKviDKTKlD~~st~hlfqEVRCMKLVQ--HpNiVRLYEViDTQTKlyLi   95 (864)
T KOG4717|consen   18 GLYDLEKTLGRGHFAVVKLARHVFTGEKVAVKVIDKTKLDTLSTGHLFQEVRCMKLVQ--HPNIVRLYEVIDTQTKLYLI   95 (864)
T ss_pred             eeehhhhhhcCCceehhhhhhhhcccceeEEEEecccccchhhhhHHHHHHHHHHHhc--CcCeeeeeehhcccceEEEE
Confidence            347777999999999998888 567999999999866333  3556889999999999  99999999999999999999


Q ss_pred             hhhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhh
Q 039630          111 PLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHE  168 (174)
Q Consensus       111 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~  168 (174)
                      .  +..+.+.++.+.+...               .-+.+....+++.||+.|+.|+|.
T Consensus        96 L--ELGD~GDl~DyImKHe---------------~Gl~E~La~kYF~QI~~AI~YCHq  136 (864)
T KOG4717|consen   96 L--ELGDGGDLFDYIMKHE---------------EGLNEDLAKKYFAQIVHAISYCHQ  136 (864)
T ss_pred             E--EecCCchHHHHHHhhh---------------ccccHHHHHHHHHHHHHHHHHHhh
Confidence            9  8888888887765421               237788889999999999999976

>cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins

Probab=99.41  E-value=2.8e-12  Score=93.55  Aligned_cols=118  Identities=25%  Similarity=0.421  Sum_probs=86.6

Q ss_pred             cCCeeecceecccCCeeEEEEE-EcCCCEEEEEEeeccCcc--chhHHHHHHHHHhcccccCCCeeeeecceecCCC---
Q 039630           33 TNGFRTSNKIGEGGFGSVYKGR-LEDGTVVAVNVLSVESKQ--GETEFMSEVASMANINICHENLVKLHGGCIDGPS---  106 (174)
Q Consensus        33 ~~~~~~~~~lg~G~~g~V~~~~-~~~~~~~avK~~~~~~~~--~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~~~~~---  106 (174)
                      .++|.+.+.||+|+||.||++. ..++..+++|.+......  ....+.+|+.+++.++  |+|++++++.+.....   
T Consensus         7 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~--h~~i~~~~~~~~~~~~~~~   84 (311)
T cd07866           7 LRDYEILGKLGEGTFGEVYKARQIKTGRVVALKKILMHNEKDGFPITALREIKILKKLK--HPNVVPLIDMAVERPDKSK   84 (311)
T ss_pred             cccEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEEeccCCCCcchhHHHHHHHHHhcC--CCCccchhhheeccccccc
Confidence            3679999999999999999999 456889999998754322  2345678999999999  9999999998765433   


Q ss_pred             -----cccchhhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhcc
Q 039630          107 -----RILAPLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEI  170 (174)
Q Consensus       107 -----~~lv~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  170 (174)
                           .++++  ++.... +...+               ......+++..+..++.|+++||+|||++.
T Consensus        85 ~~~~~~~lv~--~~~~~~-l~~~~---------------~~~~~~~~~~~~~~i~~~l~~al~~lH~~~  135 (311)
T cd07866          85 RKRGSVYMVT--PYMDHD-LSGLL---------------ENPSVKLTESQIKCYMLQLLEGINYLHENH  135 (311)
T ss_pred             ccCceEEEEE--ecCCcC-HHHHH---------------hccccCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence                 24444  333321 11111               012235889999999999999999999864

Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic

>cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1

Probab=99.41  E-value=2e-12  Score=96.64  Aligned_cols=115  Identities=17%  Similarity=0.187  Sum_probs=85.7

Q ss_pred             cCCeeecceecccCCeeEEEEE-EcCCCEEEEEEeecc--CccchhHHHHHHHHHhcccccCCCeeeeecceecCC----
Q 039630           33 TNGFRTSNKIGEGGFGSVYKGR-LEDGTVVAVNVLSVE--SKQGETEFMSEVASMANINICHENLVKLHGGCIDGP----  105 (174)
Q Consensus        33 ~~~~~~~~~lg~G~~g~V~~~~-~~~~~~~avK~~~~~--~~~~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~~~~----  105 (174)
                      .++|...+.||+|+||.||++. ...+..+|+|.+...  .......+.+|+.+++.++  |+|++++++.+...+    
T Consensus        23 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~--h~~ii~~~~~~~~~~~~~~  100 (364)
T cd07875          23 LKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVN--HKNIIGLLNVFTPQKSLEE  100 (364)
T ss_pred             hcceeEEEEeecCCCeEEEEEEECCCCcEEEEEEeCccccCchhHHHHHHHHHHHHhcC--CCCccccceeecccccccc
Confidence            4679999999999999999998 456889999999754  2334556788999999999  999999999876543    


Q ss_pred             --CcccchhhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhcc
Q 039630          106 --SRILAPLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEI  170 (174)
Q Consensus       106 --~~~lv~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  170 (174)
                        ..++++  ++.+.. +...+                  ...+++..+..++.|++.||+|||++.
T Consensus       101 ~~~~~lv~--e~~~~~-l~~~~------------------~~~~~~~~~~~~~~qi~~aL~~LH~~~  146 (364)
T cd07875         101 FQDVYIVM--ELMDAN-LCQVI------------------QMELDHERMSYLLYQMLCGIKHLHSAG  146 (364)
T ss_pred             cCeEEEEE--eCCCCC-HHHHH------------------HhcCCHHHHHHHHHHHHHHHHHHhhCC
Confidence              245555  443322 11111                  012577788889999999999999863

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn

>cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase

Probab=99.41  E-value=2.5e-12  Score=92.57  Aligned_cols=111  Identities=20%  Similarity=0.228  Sum_probs=86.8

Q ss_pred             ecccCCeeEEEEE-EcCCCEEEEEEeeccC---ccchhHHHHHHHHHhcccccCCCeeeeecceecCCCcccchhhhhhh
Q 039630           42 IGEGGFGSVYKGR-LEDGTVVAVNVLSVES---KQGETEFMSEVASMANINICHENLVKLHGGCIDGPSRILAPLQASIE  117 (174)
Q Consensus        42 lg~G~~g~V~~~~-~~~~~~~avK~~~~~~---~~~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~~~~~~~lv~~~~~~~  117 (174)
                      ||+|+||.||++. ..++..+++|.+....   ......+..|+.+++.++  |+|++++++.+...+..++++  ++.+
T Consensus         1 lg~g~~g~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~--~~~i~~~~~~~~~~~~~~lv~--e~~~   76 (277)
T cd05577           1 LGKGGFGEVCACQVKATGKMYACKKLDKKRLKKRKGEQMALNEKKILEKVS--SRFIVSLAYAFETKDDLCLVM--TLMN   76 (277)
T ss_pred             CCCCCceeEEEEEEcCCCcEEEEEEEehhhhhhhhhhHHHHHHHHHHHhCC--CCCEeeeeeEEecCCeEEEEE--ecCC
Confidence            6899999999998 4568899999997542   222345678999999999  999999999998888888888  7766


Q ss_pred             hhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhcc
Q 039630          118 ALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEI  170 (174)
Q Consensus       118 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  170 (174)
                      ++.+...+..              .....+++..+..++.|++.||.|||++.
T Consensus        77 ~~~L~~~l~~--------------~~~~~~~~~~~~~~~~ql~~~l~~lH~~~  115 (277)
T cd05577          77 GGDLKYHIYN--------------VGEPGFPEARAIFYAAQIICGLEHLHQRR  115 (277)
T ss_pred             CCcHHHHHHH--------------cCcCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            6666543311              11124788899999999999999999864

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of

>cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4

Probab=99.41  E-value=1.7e-12  Score=93.79  Aligned_cols=120  Identities=18%  Similarity=0.255  Sum_probs=87.6

Q ss_pred             CeeecceecccCCeeEEEEE-EcCCCEEEEEEeeccC-ccchhHHHHHHHHHhcccccCCCeeeeecceecCCCcccchh
Q 039630           35 GFRTSNKIGEGGFGSVYKGR-LEDGTVVAVNVLSVES-KQGETEFMSEVASMANINICHENLVKLHGGCIDGPSRILAPL  112 (174)
Q Consensus        35 ~~~~~~~lg~G~~g~V~~~~-~~~~~~~avK~~~~~~-~~~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~~~~~~~lv~~  112 (174)
                      +|...+.||+|+||.||++. ..++..+|+|.+.... ......+.+|+.++.++. .|+|++++++.+..++..+++++
T Consensus         5 ~~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~~~-~~~~iv~~~~~~~~~~~~~~~~e   83 (288)
T cd06616           5 DLKDLGEIGRGAFGTVNKMLHKPSGTIMAVKRIRSTVDEKEQKRLLMDLDVVMRSS-DCPYIVKFYGALFREGDCWICME   83 (288)
T ss_pred             HhHHHHHhCCCCceEEEEEEECCCCCEEEEEEehhccChHHHHHHHHHHHHHHHhc-CCCCEeeeeeEEecCCcEEEEEe
Confidence            45566889999999999998 5568999999987542 234556888998888874 49999999999988888887774


Q ss_pred             hhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhc
Q 039630          113 QASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEE  169 (174)
Q Consensus       113 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~  169 (174)
                      +.......+.....              ......+++..+..++.|++.||+|||+.
T Consensus        84 ~~~~~l~~l~~~~~--------------~~~~~~l~~~~~~~i~~~i~~~l~~lh~~  126 (288)
T cd06616          84 LMDISLDKFYKYVY--------------EVLKSVIPEEILGKIAVATVKALNYLKEE  126 (288)
T ss_pred             cccCCHHHHHHHHH--------------HhhcCCCCHHHHHHHHHHHHHHHHHHhhc
Confidence            33222122221110              01123578899999999999999999974

Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates

>cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase

Probab=99.40  E-value=3e-12  Score=95.04  Aligned_cols=121  Identities=22%  Similarity=0.230  Sum_probs=86.9

Q ss_pred             hHHhhcCCeeecceecccCCeeEEEEE-EcCCCEEEEEEeeccC--ccchhHHHHHHHHHhcccccCCCeeeeecceecC
Q 039630           28 ELKIATNGFRTSNKIGEGGFGSVYKGR-LEDGTVVAVNVLSVES--KQGETEFMSEVASMANINICHENLVKLHGGCIDG  104 (174)
Q Consensus        28 ~~~~~~~~~~~~~~lg~G~~g~V~~~~-~~~~~~~avK~~~~~~--~~~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~~~  104 (174)
                      .+....++|...+.||+|+||.||++. ..++..+|+|.++...  ......+.+|+.++.+++  |+||+++.+.+...
T Consensus        11 ~~~~~~~~y~~~~~lg~G~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~--h~~iv~~~~~~~~~   88 (345)
T cd07877          11 TIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMK--HENVIGLLDVFTPA   88 (345)
T ss_pred             HHhhccCceEEEEEeeecCCeEEEEEEEcCCCeEEEEEEecCcchhhHHHHHHHHHHHHHHHcC--CCcccceeeeeeec
Confidence            334455789999999999999999998 5678899999987542  223456778999999999  99999999987543


Q ss_pred             CC------cccchhhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhcc
Q 039630          105 PS------RILAPLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEI  170 (174)
Q Consensus       105 ~~------~~lv~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  170 (174)
                      ..      .+++.  +.. ++.+.. +                .....+++..+..++.|++.||+|||++.
T Consensus        89 ~~~~~~~~~~lv~--~~~-~~~L~~-~----------------~~~~~l~~~~~~~i~~qi~~aL~~LH~~~  140 (345)
T cd07877          89 RSLEEFNDVYLVT--HLM-GADLNN-I----------------VKCQKLTDDHVQFLIYQILRGLKYIHSAD  140 (345)
T ss_pred             ccccccccEEEEe--hhc-ccCHHH-H----------------HhcCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            21      23333  211 112211 1                01124788889999999999999999864

Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14

>cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3

Probab=99.40  E-value=2.6e-12  Score=92.05  Aligned_cols=121  Identities=24%  Similarity=0.354  Sum_probs=83.2

Q ss_pred             eeecceecccCCeeEEEEEEc----CCCEEEEEEeeccC--ccchhHHHHHHHHHhcccccCCCeeeeecceecCCC---
Q 039630           36 FRTSNKIGEGGFGSVYKGRLE----DGTVVAVNVLSVES--KQGETEFMSEVASMANINICHENLVKLHGGCIDGPS---  106 (174)
Q Consensus        36 ~~~~~~lg~G~~g~V~~~~~~----~~~~~avK~~~~~~--~~~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~~~~~---  106 (174)
                      |.+.+.||+|+||.||++...    ++..+|+|+++...  ....+.+.+|+.+++.++  |+|++++++.+.....   
T Consensus         1 ~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~--h~~i~~~~~~~~~~~~~~~   78 (273)
T cd05074           1 FTLGRMLGKGEFGSVREAQLKSEDGSFQKVAVKMLKADIFSSSDIEEFLREAACMKEFD--HPNVIKLIGVSLRSRAKGR   78 (273)
T ss_pred             CcchhcccCCCCCCEEeeEeeccCCCceEEEEEEeccccCChHHHHHHHHHHHHHhcCC--CCCcceEEEEEccCCCCCc
Confidence            455688999999999999842    36789999997542  233556889999999999  9999999998765432   


Q ss_pred             ---cccchhhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhcc
Q 039630          107 ---RILAPLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEI  170 (174)
Q Consensus       107 ---~~lv~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  170 (174)
                         .++++  ++...+.+...+...       ..   ......+++.....++.|++.||+|||++.
T Consensus        79 ~~~~~~~~--~~~~~~~l~~~~~~~-------~~---~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~  133 (273)
T cd05074          79 LPIPMVIL--PFMKHGDLHTFLLMS-------RI---GEEPFTLPLQTLVRFMIDIASGMEYLSSKN  133 (273)
T ss_pred             ccceEEEE--ecCCCCcHHHHHHHh-------cc---cCCCCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence               12333  344444433221100       00   011224688888999999999999999864

Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac

>cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6

Probab=99.40  E-value=4.7e-12  Score=92.74  Aligned_cols=117  Identities=20%  Similarity=0.273  Sum_probs=80.1

Q ss_pred             ceecccCCeeEEEEEEc---CCCEEEEEEeeccCccchhHHHHHHHHHhcccccCCCeeeeecceecC--CCcccchhhh
Q 039630           40 NKIGEGGFGSVYKGRLE---DGTVVAVNVLSVESKQGETEFMSEVASMANINICHENLVKLHGGCIDG--PSRILAPLQA  114 (174)
Q Consensus        40 ~~lg~G~~g~V~~~~~~---~~~~~avK~~~~~~~~~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~~~--~~~~lv~~~~  114 (174)
                      .+||+|+||.||+|...   ++..+|+|.++...  ....+.+|+.+++.++  |+|++++.+.+...  ...++++  +
T Consensus         7 ~~lG~G~~g~Vy~~~~~~~~~~~~~a~k~~~~~~--~~~~~~~E~~~l~~l~--h~niv~~~~~~~~~~~~~~~lv~--e   80 (317)
T cd07867           7 CKVGRGTYGHVYKAKRKDGKDEKEYALKQIEGTG--ISMSACREIALLRELK--HPNVIALQKVFLSHSDRKVWLLF--D   80 (317)
T ss_pred             eEeccCCCeeEEEEEecCCCccceEEEEEecCCC--CcHHHHHHHHHHHhCC--CCCeeeEEEEEeccCCCeEEEEE--e
Confidence            57999999999999843   45789999886432  2345778999999999  99999999988653  3445555  4


Q ss_pred             hhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhcc
Q 039630          115 SIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEI  170 (174)
Q Consensus       115 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  170 (174)
                      +.+.. +...+....       ..........+++..+..++.|++.||.|||++.
T Consensus        81 ~~~~~-l~~~~~~~~-------~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~  128 (317)
T cd07867          81 YAEHD-LWHIIKFHR-------ASKANKKPMQLPRSMVKSLLYQILDGIHYLHANW  128 (317)
T ss_pred             eeCCc-HHHHHHhhh-------ccccCCCCccCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            44332 221110000       0000112234788888999999999999999863

Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as

>PTZ00284 protein kinase; Provisional

Probab=99.40  E-value=2.5e-12  Score=99.16  Aligned_cols=121  Identities=17%  Similarity=0.223  Sum_probs=82.1

Q ss_pred             HHhhcCCeeecceecccCCeeEEEEE-EcCCCEEEEEEeeccCccchhHHHHHHHHHhcccc----cCCCeeeeecceec
Q 039630           29 LKIATNGFRTSNKIGEGGFGSVYKGR-LEDGTVVAVNVLSVESKQGETEFMSEVASMANINI----CHENLVKLHGGCID  103 (174)
Q Consensus        29 ~~~~~~~~~~~~~lg~G~~g~V~~~~-~~~~~~~avK~~~~~~~~~~~~~~~e~~~l~~l~~----~h~~i~~~~~~~~~  103 (174)
                      +....++|++.+.||+|+||.||++. ..++..||||+++.. .........|+.++..+..    .+.+++.+.+++..
T Consensus       124 ~~~~~~~y~i~~~lG~G~fg~V~~a~~~~~~~~vAvK~i~~~-~~~~~~~~~e~~~l~~l~~~~~~~~~~i~~i~~~~~~  202 (467)
T PTZ00284        124 IDVSTQRFKILSLLGEGTFGKVVEAWDRKRKEYCAVKIVRNV-PKYTRDAKIEIQFMEKVRQADPADRFPLMKIQRYFQN  202 (467)
T ss_pred             cccCCCcEEEEEEEEeccCEEEEEEEEcCCCeEEEEEEEecc-hhhHHHHHHHHHHHHHHhhcCcccCcceeeeEEEEEc
Confidence            34445789999999999999999998 556889999999643 2223345567777766540    14458888887765


Q ss_pred             CC-CcccchhhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhc
Q 039630          104 GP-SRILAPLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEE  169 (174)
Q Consensus       104 ~~-~~~lv~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~  169 (174)
                      .. ..++++  +.. ++.+...+                .....+++..+..++.||+.||+|||++
T Consensus       203 ~~~~~~iv~--~~~-g~~l~~~l----------------~~~~~l~~~~~~~i~~qi~~aL~yLH~~  250 (467)
T PTZ00284        203 ETGHMCIVM--PKY-GPCLLDWI----------------MKHGPFSHRHLAQIIFQTGVALDYFHTE  250 (467)
T ss_pred             CCceEEEEE--ecc-CCCHHHHH----------------HHcCCCCHHHHHHHHHHHHHHHHHHHhc
Confidence            43 444554  322 22222221                1123478889999999999999999974

>cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins

Probab=99.40  E-value=1.3e-12  Score=93.00  Aligned_cols=109  Identities=18%  Similarity=0.199  Sum_probs=86.6

Q ss_pred             ecccCCeeEEEEEEc-CCCEEEEEEeeccCc---cchhHHHHHHHHHhcccccCCCeeeeecceecCCCcccchhhhhhh
Q 039630           42 IGEGGFGSVYKGRLE-DGTVVAVNVLSVESK---QGETEFMSEVASMANINICHENLVKLHGGCIDGPSRILAPLQASIE  117 (174)
Q Consensus        42 lg~G~~g~V~~~~~~-~~~~~avK~~~~~~~---~~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~~~~~~~lv~~~~~~~  117 (174)
                      ||.|+||.||++... ++..+++|.++....   .....+.+|+.++..++  |+|++++++.+......++++  ++..
T Consensus         1 lg~g~~~~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~~~--h~~i~~~~~~~~~~~~~~lv~--e~~~   76 (265)
T cd05579           1 ISKGAYGRVFLAKKKSTGDIYAIKVIKKADMIRKNQVDQVLTERDILSQAQ--SPYVVKLYYSFQGKKNLYLVM--EYLP   76 (265)
T ss_pred             CCCCCceEEEEEEECCCCCEEEEEEecchhhhhhhHHHHHHHHHHHHHhCC--CcchhHHHHheecCcEEEEEE--ecCC
Confidence            588999999999954 589999999975432   34567888999999999  999999999998888888888  6666


Q ss_pred             hhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhcc
Q 039630          118 ALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEI  170 (174)
Q Consensus       118 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  170 (174)
                      ++.+...+.                ....+++..+..++.|++.||+|||++.
T Consensus        77 ~~~L~~~l~----------------~~~~~~~~~~~~i~~qi~~~L~~lH~~~  113 (265)
T cd05579          77 GGDLASLLE----------------NVGSLDEDVARIYIAEIVLALEYLHSNG  113 (265)
T ss_pred             CCcHHHHHH----------------HcCCCCHHHHHHHHHHHHHHHHHHHHcC
Confidence            555544221                1124788899999999999999999864

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re

>PTZ00024 cyclin-dependent protein kinase; Provisional

Probab=99.39  E-value=3.1e-12  Score=94.55  Aligned_cols=116  Identities=22%  Similarity=0.300  Sum_probs=87.1

Q ss_pred             CCee-ecceecccCCeeEEEEE-EcCCCEEEEEEeeccCccc--------------hhHHHHHHHHHhcccccCCCeeee
Q 039630           34 NGFR-TSNKIGEGGFGSVYKGR-LEDGTVVAVNVLSVESKQG--------------ETEFMSEVASMANINICHENLVKL   97 (174)
Q Consensus        34 ~~~~-~~~~lg~G~~g~V~~~~-~~~~~~~avK~~~~~~~~~--------------~~~~~~e~~~l~~l~~~h~~i~~~   97 (174)
                      +.|. +.+.||.|+||.||++. ..+++.+|+|.++......              ...+.+|+.++..++  |+|++++
T Consensus         8 ~ry~~~~~~ig~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~--h~~iv~~   85 (335)
T PTZ00024          8 ERYIQKGAHLGEGTYGKVEKAYDTLTGKIVAIKKVKIIEISNDVTKDRQLVGMCGIHFTTLRELKIMNEIK--HENIMGL   85 (335)
T ss_pred             cchhhhhhcccCCCceeEEEEEECCCCCeEEEEEeeccccccccccchhhhcccccchhHHHHHHHHHhCC--Ccceeee
Confidence            3454 45779999999999998 4578899999987542211              124678999999999  9999999


Q ss_pred             ecceecCCCcccchhhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhcc
Q 039630           98 HGGCIDGPSRILAPLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEI  170 (174)
Q Consensus        98 ~~~~~~~~~~~lv~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  170 (174)
                      ++.+...+..++++  ++.. +.+...+                .....+++.....++.|++.||.|||+..
T Consensus        86 ~~~~~~~~~~~lv~--e~~~-~~l~~~l----------------~~~~~~~~~~~~~~~~ql~~aL~~LH~~~  139 (335)
T PTZ00024         86 VDVYVEGDFINLVM--DIMA-SDLKKVV----------------DRKIRLTESQVKCILLQILNGLNVLHKWY  139 (335)
T ss_pred             eEEEecCCcEEEEE--eccc-cCHHHHH----------------HhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            99999888888887  4443 2333211                11234788888999999999999999864

>KOG1152 consensus Signal transduction serine/threonine kinase with PAS/PAC sensor domain [Signal transduction mechanisms]

Probab=99.39  E-value=4.5e-13  Score=101.90  Aligned_cols=120  Identities=22%  Similarity=0.267  Sum_probs=92.0

Q ss_pred             CCeeecceecccCCeeEEEEE-EcCCCEEEEEEeeccC----c----cchhHHHHHHHHHhcccc-cCCCeeeeecceec
Q 039630           34 NGFRTSNKIGEGGFGSVYKGR-LEDGTVVAVNVLSVES----K----QGETEFMSEVASMANINI-CHENLVKLHGGCID  103 (174)
Q Consensus        34 ~~~~~~~~lg~G~~g~V~~~~-~~~~~~~avK~~~~~~----~----~~~~~~~~e~~~l~~l~~-~h~~i~~~~~~~~~  103 (174)
                      .+|..+..+|+|+||+|+.|. .++...|++|.+.++.    .    ..-..+..|+.||..++. .|+||+++++.|.+
T Consensus       561 s~yttlq~lG~GAyGkV~lai~K~n~~eVViK~I~KeRIL~DtWvrDrkLGtVp~EIqIla~l~~~sH~NIlKlLdfFEd  640 (772)
T KOG1152|consen  561 SDYTTLQPLGEGAYGKVNLAIHKENNYEVVIKMIFKERILVDTWVRDRKLGTVPSEIQILATLNKHSHENILKLLDFFED  640 (772)
T ss_pred             ccceeeeeccccccceEEEeeecccceEEEeeehhhhhhhhhhhhcccccCccchhHHHHHHhhhcCccchhhhhheeec
Confidence            569999999999999999999 5567799999997652    1    112246789999987632 59999999999999


Q ss_pred             CCCcccchhhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhcc
Q 039630          104 GPSRILAPLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEI  170 (174)
Q Consensus       104 ~~~~~lv~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  170 (174)
                      ++..++.++-. .++..|+. +               ...+..+.++....|+.||+-|.++||++.
T Consensus       641 dd~yyl~te~h-g~gIDLFd-~---------------IE~kp~m~E~eAk~IFkQV~agi~hlh~~~  690 (772)
T KOG1152|consen  641 DDYYYLETEVH-GEGIDLFD-F---------------IEFKPRMDEPEAKLIFKQVVAGIKHLHDQG  690 (772)
T ss_pred             CCeeEEEecCC-CCCcchhh-h---------------hhccCccchHHHHHHHHHHHhccccccccC
Confidence            99988887322 22233333 2               234456899999999999999999999864

>cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase

Probab=99.39  E-value=1.9e-12  Score=91.97  Aligned_cols=115  Identities=26%  Similarity=0.427  Sum_probs=88.1

Q ss_pred             CCeeecceecccCCeeEEEEEEcCCCEEEEEEeeccCccchhHHHHHHHHHhcccccCCCeeeeecceecCCCcccchhh
Q 039630           34 NGFRTSNKIGEGGFGSVYKGRLEDGTVVAVNVLSVESKQGETEFMSEVASMANINICHENLVKLHGGCIDGPSRILAPLQ  113 (174)
Q Consensus        34 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~avK~~~~~~~~~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~~~~~~~lv~~~  113 (174)
                      ++|++.+.||+|+||.||.+.. ++..+++|.++..  .....+.+|+.++..++  |+|++++.+.+... ..++++  
T Consensus         6 ~~~~~~~~lg~g~~g~v~~~~~-~~~~~~iK~~~~~--~~~~~~~~e~~~l~~~~--~~~i~~~~~~~~~~-~~~~v~--   77 (254)
T cd05083           6 QKLTLGEIIGEGEFGAVLQGEY-TGQKVAVKNIKCD--VTAQAFLEETAVMTKLH--HKNLVRLLGVILHN-GLYIVM--   77 (254)
T ss_pred             HHceeeeeeccCCCCceEeccc-CCCceEEEeecCc--chHHHHHHHHHHHHhCC--CCCcCeEEEEEcCC-CcEEEE--
Confidence            4688889999999999999875 5778999998643  23457889999999999  99999999988654 456666  


Q ss_pred             hhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhcc
Q 039630          114 ASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEI  170 (174)
Q Consensus       114 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  170 (174)
                      ++...+.+...+..              .....+++..+..++.|++.|+.|||++.
T Consensus        78 e~~~~~~L~~~l~~--------------~~~~~~~~~~~~~~~~qi~~al~~lH~~~  120 (254)
T cd05083          78 ELMSKGNLVNFLRT--------------RGRALVSVIQLLQFSLDVAEGMEYLESKK  120 (254)
T ss_pred             ECCCCCCHHHHHHh--------------cCcCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            66665555543311              11224688888999999999999999754

Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki

>KOG0587 consensus Traf2- and Nck-interacting kinase and related germinal center kinase (GCK) family protein kinases [Signal transduction mechanisms]

Probab=99.39  E-value=1.1e-12  Score=103.62  Aligned_cols=136  Identities=23%  Similarity=0.351  Sum_probs=101.9

Q ss_pred             ceechhhHHhhcCCeeecceecccCCeeEEEEE-EcCCCEEEEEEeeccCccchhHHHHHHHHHhcccccCCCeeeeecc
Q 039630           22 SKISYNELKIATNGFRTSNKIGEGGFGSVYKGR-LEDGTVVAVNVLSVESKQGETEFMSEVASMANINICHENLVKLHGG  100 (174)
Q Consensus        22 ~~~~~~~~~~~~~~~~~~~~lg~G~~g~V~~~~-~~~~~~~avK~~~~~~~~~~~~~~~e~~~l~~l~~~h~~i~~~~~~  100 (174)
                      ..+.++.+.+.+..+++.+++|.|.+|.||++. .++++.+|+|+.... .+.-.++..|.++++.+. .|||++.++|+
T Consensus         7 ~~~~~~~lpdp~d~~ei~evig~Gtygkv~k~k~~~~~~~aa~kI~~~~-~d~deEiE~eynil~~~~-~hpnv~~fyg~   84 (953)
T KOG0587|consen    7 MDIDLSSLPDPADIFEIIEVIGNGTYGKVYKGRHVKTGQLAAIKIMDPT-EDEEEEIELEYNMLKKYS-HHPNVATFYGA   84 (953)
T ss_pred             cccchhhCCCCCCccEEEEEEeeccceeEEEEeeeecCceeeeEeecCC-ccccHHHHHHHHHHHhcc-CCCCcceEEEE
Confidence            446667777788889999999999999999999 788999999998633 333446677888888776 69999999999


Q ss_pred             eecCCCcccchhhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhcc
Q 039630          101 CIDGPSRILAPLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEI  170 (174)
Q Consensus       101 ~~~~~~~~lv~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  170 (174)
                      +...+.       ...+.++|++++|.+|+.-++  +...  ...++.|..+..|++.++.|+.+||.+.
T Consensus        85 ~~k~~~-------~~~DqLWLVMEfC~gGSVTDL--VKn~--~g~rl~E~~IaYI~re~lrgl~HLH~nk  143 (953)
T KOG0587|consen   85 FIKKDP-------GNGDQLWLVMEFCGGGSVTDL--VKNT--KGNRLKEEWIAYILREILRGLAHLHNNK  143 (953)
T ss_pred             EEEecC-------CCCCeEEEEeeccCCccHHHH--Hhhh--cccchhhHHHHHHHHHHHHHHHHHhhcc
Confidence            966533       233445555555555554442  2211  1456899999999999999999999864

>cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7

Probab=99.39  E-value=3e-12  Score=93.02  Aligned_cols=123  Identities=20%  Similarity=0.282  Sum_probs=89.5

Q ss_pred             hHHhhcCCeeecceecccCCeeEEEEEEc-CCCEEEEEEeeccC-ccchhHHHHHHHHHhcccccCCCeeeeecceecCC
Q 039630           28 ELKIATNGFRTSNKIGEGGFGSVYKGRLE-DGTVVAVNVLSVES-KQGETEFMSEVASMANINICHENLVKLHGGCIDGP  105 (174)
Q Consensus        28 ~~~~~~~~~~~~~~lg~G~~g~V~~~~~~-~~~~~avK~~~~~~-~~~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~~~~  105 (174)
                      .+....++|...+.||+|+||.||++... ++..+|+|.++... ......+..|+.++.... .|+|++++++.+....
T Consensus         9 ~~~~~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~e~~~~~~~~-~~~~i~~~~~~~~~~~   87 (296)
T cd06618           9 KYPADLNDLENLGEIGSGTCGQVYKMRFKKTGHVMAVKQMRRTGNKEENKRILMDLDVVLKSH-DCPYIVKCYGYFITDS   87 (296)
T ss_pred             eccCCcchheeeeEeeccCCeEEEEEEECCCCeEEEEEEEeccCChHHHHHHHHHHHHHHhcc-CCCchHhhheeeecCC
Confidence            34445567888999999999999999954 48899999997543 223445667777665553 4999999999999988


Q ss_pred             CcccchhhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhc
Q 039630          106 SRILAPLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEE  169 (174)
Q Consensus       106 ~~~lv~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~  169 (174)
                      ..++++  ++.... +.... .              .....+++..+..++.|++.||+|||+.
T Consensus        88 ~~~~v~--e~~~~~-l~~l~-~--------------~~~~~l~~~~~~~i~~~i~~~l~~lH~~  133 (296)
T cd06618          88 DVFICM--ELMSTC-LDKLL-K--------------RIQGPIPEDILGKMTVAIVKALHYLKEK  133 (296)
T ss_pred             eEEEEe--eccCcC-HHHHH-H--------------HhcCCCCHHHHHHHHHHHHHHHHHHHhh
Confidence            888888  443321 11111 0              0112578888889999999999999974

Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it

>KOG0690 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.38  E-value=9.1e-14  Score=99.37  Aligned_cols=117  Identities=22%  Similarity=0.254  Sum_probs=99.1

Q ss_pred             CCeeecceecccCCeeEEEEE-EcCCCEEEEEEeecc---CccchhHHHHHHHHHhcccccCCCeeeeecceecCCCccc
Q 039630           34 NGFRTSNKIGEGGFGSVYKGR-LEDGTVVAVNVLSVE---SKQGETEFMSEVASMANINICHENLVKLHGGCIDGPSRIL  109 (174)
Q Consensus        34 ~~~~~~~~lg~G~~g~V~~~~-~~~~~~~avK~~~~~---~~~~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~~~~~~~l  109 (174)
                      ++|..+++||+|.||+|..|+ ..+++.+|+|++++.   ..+..+.-+.|-++|+...  ||.+..+--.|.+.+.++.
T Consensus       168 ~dFdfLKvLGkGTFGKVIL~rEKat~k~YAiKIlkKeviiakdEVAHTlTE~RVL~~~~--HPFLt~LKYsFQt~drlCF  245 (516)
T KOG0690|consen  168 EDFDFLKVLGKGTFGKVILCREKATGKLYAIKILKKEVIIAKDEVAHTLTENRVLQNCR--HPFLTSLKYSFQTQDRLCF  245 (516)
T ss_pred             chhhHHHHhcCCccceEEEEeecccCceeehhhhhhhheeehHHhhhhhhHHHHHHhcc--CcHHHHhhhhhccCceEEE
Confidence            467788999999999999998 778999999999876   3455667788999999999  9999999999999999888


Q ss_pred             chhhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhcc
Q 039630          110 APLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEI  170 (174)
Q Consensus       110 v~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  170 (174)
                      ||  ++..++.|+..+                .+...+++.....+-..|+.||.|||++.
T Consensus       246 VM--eyanGGeLf~HL----------------srer~FsE~RtRFYGaEIvsAL~YLHs~~  288 (516)
T KOG0690|consen  246 VM--EYANGGELFFHL----------------SRERVFSEDRTRFYGAEIVSALGYLHSRN  288 (516)
T ss_pred             EE--EEccCceEeeeh----------------hhhhcccchhhhhhhHHHHHHhhhhhhCC
Confidence            88  888888887754                22345788888889999999999999953

>cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase

Probab=99.38  E-value=3.5e-12  Score=93.95  Aligned_cols=115  Identities=20%  Similarity=0.252  Sum_probs=89.2

Q ss_pred             CeeecceecccCCeeEEEEEE-cCCCEEEEEEeeccC--ccchhHHHHHHHHHhcccccCCCeeeeecceecCC-----C
Q 039630           35 GFRTSNKIGEGGFGSVYKGRL-EDGTVVAVNVLSVES--KQGETEFMSEVASMANINICHENLVKLHGGCIDGP-----S  106 (174)
Q Consensus        35 ~~~~~~~lg~G~~g~V~~~~~-~~~~~~avK~~~~~~--~~~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~~~~-----~  106 (174)
                      +|.+.+.||+|++|.||++.. .++..+++|.+....  ......+..|+.+++.++  |+|++++.+.+...+     .
T Consensus         1 ~y~i~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~--~~~i~~~~~~~~~~~~~~~~~   78 (330)
T cd07834           1 RYELLKPIGSGAYGVVCSAVDKRTGRKVAIKKISNVFDDLIDAKRILREIKLLRHLR--HENIIGLLDILRPPSPEDFND   78 (330)
T ss_pred             CceeeeeecCCCCeEEEEEEeCCCCcEEEEEeeccccccchhhhhHHHHHHHHHhcC--CcchhhhhhhhcccCcccccc
Confidence            477889999999999999994 458899999997543  344567889999999999  999999999987765     5


Q ss_pred             cccchhhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhcc
Q 039630          107 RILAPLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEI  170 (174)
Q Consensus       107 ~~lv~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  170 (174)
                      .++++  ++... .+...+                .....+++..+..++.|++.||+|||++.
T Consensus        79 ~~lv~--e~~~~-~l~~~l----------------~~~~~l~~~~~~~i~~~l~~~l~~LH~~g  123 (330)
T cd07834          79 VYIVT--ELMET-DLHKVI----------------KSPQPLTDDHIQYFLYQILRGLKYLHSAN  123 (330)
T ss_pred             eEEEe--cchhh-hHHHHH----------------hCCCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            66666  44442 232211                11225788999999999999999999864

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and

>cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase

Probab=99.38  E-value=2.6e-12  Score=92.91  Aligned_cols=117  Identities=22%  Similarity=0.261  Sum_probs=90.8

Q ss_pred             CeeecceecccCCeeEEEEEE----cCCCEEEEEEeeccC----ccchhHHHHHHHHHhcccccCCCeeeeecceecCCC
Q 039630           35 GFRTSNKIGEGGFGSVYKGRL----EDGTVVAVNVLSVES----KQGETEFMSEVASMANINICHENLVKLHGGCIDGPS  106 (174)
Q Consensus        35 ~~~~~~~lg~G~~g~V~~~~~----~~~~~~avK~~~~~~----~~~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~~~~~  106 (174)
                      +|.+.+.||+|+||.||++..    .++..+|+|.++...    ......+..|+.++..+. .|+|++++.+.+.....
T Consensus         1 ~~~~~~~ig~G~~~~vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~~~-~~~~i~~~~~~~~~~~~   79 (288)
T cd05583           1 NFELLRVLGTGAYGKVFLVRKVGGHDAGKLYAMKVLKKATIVQKAKTAEHTRTERQVLEAVR-RCPFLVTLHYAFQTDTK   79 (288)
T ss_pred             CceEEEEeccCCCceEEEEEEeccccCCcEEEEEEEehHHHHhhhhHHHHHHHHHHHHHhcc-CCcchhhhheeeecCCE
Confidence            367789999999999999873    356789999987432    223456788999999984 39999999999988888


Q ss_pred             cccchhhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhcc
Q 039630          107 RILAPLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEI  170 (174)
Q Consensus       107 ~~lv~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  170 (174)
                      .++++  ++..++.+...+..                ...+++..+..++.|++.||+|||+..
T Consensus        80 ~~lv~--e~~~~~~L~~~~~~----------------~~~~~~~~~~~~~~ql~~~l~~lH~~~  125 (288)
T cd05583          80 LHLIL--DYVNGGELFTHLYQ----------------REHFTESEVRVYIAEIVLALDHLHQLG  125 (288)
T ss_pred             EEEEE--ecCCCCcHHHHHhh----------------cCCcCHHHHHHHHHHHHHHHHHHHHCC
Confidence            88888  77666666654421                124678888899999999999999753

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines

>cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros

Probab=99.38  E-value=1.4e-12  Score=93.28  Aligned_cols=117  Identities=29%  Similarity=0.427  Sum_probs=87.9

Q ss_pred             eecccCCeeEEEEEEcC-------CCEEEEEEeeccC-ccchhHHHHHHHHHhcccccCCCeeeeecceecCCCcccchh
Q 039630           41 KIGEGGFGSVYKGRLED-------GTVVAVNVLSVES-KQGETEFMSEVASMANINICHENLVKLHGGCIDGPSRILAPL  112 (174)
Q Consensus        41 ~lg~G~~g~V~~~~~~~-------~~~~avK~~~~~~-~~~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~~~~~~~lv~~  112 (174)
                      .||+|+||.||++...+       +..+++|.+.... ......+.+|+.+++.++  |+||+++.+.+...+..++++ 
T Consensus         2 ~lg~g~~g~vy~~~~~~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~--h~~i~~~~~~~~~~~~~~~v~-   78 (269)
T cd05044           2 FLGSGAFGEVYEGTATDILGPGSGPIRVAVKTLRKGATDQEKKEFLKEAHLMSNFN--HPNIVKLLGVCLLNEPQYIIM-   78 (269)
T ss_pred             ccccccceeEEeeeecccccCcccceeehhhhhhcccchhhHHHHHHHHHHHHhcC--CCCeeeEeeeecCCCCeEEEE-
Confidence            68999999999998432       2578999886442 234567889999999999  999999999999888888888 


Q ss_pred             hhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhcc
Q 039630          113 QASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEI  170 (174)
Q Consensus       113 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  170 (174)
                       ++.+++.+...+.....         .......+++..++.++.|++.||.|||+..
T Consensus        79 -e~~~~~~L~~~l~~~~~---------~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~  126 (269)
T cd05044          79 -ELMEGGDLLSYLRDARV---------ERFGPPLLTLKELLDICLDVAKGCVYLEQMH  126 (269)
T ss_pred             -eccCCCcHHHHHHHhhh---------cccCCccccHHHHHHHHHHHHHHHHHHHhCC
Confidence             77766666654422110         0001234688889999999999999999864

Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male

>cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10

Probab=99.38  E-value=2.2e-12  Score=92.37  Aligned_cols=118  Identities=21%  Similarity=0.364  Sum_probs=87.7

Q ss_pred             CeeecceecccCCeeEEEEEEc--CCCEEEEEEeeccC----------ccchhHHHHHHHHHhc-ccccCCCeeeeecce
Q 039630           35 GFRTSNKIGEGGFGSVYKGRLE--DGTVVAVNVLSVES----------KQGETEFMSEVASMAN-INICHENLVKLHGGC  101 (174)
Q Consensus        35 ~~~~~~~lg~G~~g~V~~~~~~--~~~~~avK~~~~~~----------~~~~~~~~~e~~~l~~-l~~~h~~i~~~~~~~  101 (174)
                      +|...+.||+|+||.||++...  .+..+++|.+....          ......+..|+.++.+ ++  |+|++++++.+
T Consensus         1 ~y~~~~~ig~G~~~~v~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~~--h~~i~~~~~~~   78 (269)
T cd08528           1 EYAVLEHLGSGAFGCVYKVRKKNNGQNLLALKEINVHNPAFGKDKRERDKSIGDIVSEVTIIKEQLR--HPNIVRYYKTF   78 (269)
T ss_pred             CchhhhhhcCCCCceEEEEEEcCCCCceeeeeEeeccccccccccccchHHHHHHHHHHHHHhhcCC--CCCeeeEEeeE
Confidence            3677789999999999999954  36789999886431          1123456778887765 67  99999999999


Q ss_pred             ecCCCcccchhhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhh
Q 039630          102 IDGPSRILAPLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHE  168 (174)
Q Consensus       102 ~~~~~~~lv~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~  168 (174)
                      ...+..++++  ++.+++.+...+...            ......+++..++.++.|++.||.|||+
T Consensus        79 ~~~~~~~lv~--e~~~~~~l~~~l~~~------------~~~~~~~~~~~~~~~~~~l~~~l~~lh~  131 (269)
T cd08528          79 LENDRLYIVM--DLIEGAPLGEHFNSL------------KEKKQRFTEERIWNIFVQMVLALRYLHK  131 (269)
T ss_pred             ccCCeEEEEE--ecCCCCcHHHHHHHH------------HhccCCCCHHHHHHHHHHHHHHHHHhcc
Confidence            9998888888  666655554422110            1122347888899999999999999996

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24.

>KOG0200 consensus Fibroblast/platelet-derived growth factor receptor and related receptor tyrosine kinases [Signal transduction mechanisms]

Probab=99.37  E-value=1.4e-12  Score=103.22  Aligned_cols=137  Identities=25%  Similarity=0.277  Sum_probs=104.5

Q ss_pred             hHHhhcCCeeecceecccCCeeEEEEEEc----C----CCEEEEEEeecc-CccchhHHHHHHHHHhcccccCCCeeeee
Q 039630           28 ELKIATNGFRTSNKIGEGGFGSVYKGRLE----D----GTVVAVNVLSVE-SKQGETEFMSEVASMANINICHENLVKLH   98 (174)
Q Consensus        28 ~~~~~~~~~~~~~~lg~G~~g~V~~~~~~----~----~~~~avK~~~~~-~~~~~~~~~~e~~~l~~l~~~h~~i~~~~   98 (174)
                      .|+...+++.+.+.+|+|+||.|++|...    .    ...||||.++.. .......+..|+.+|+.+. .|+|++.+.
T Consensus       290 ~~e~~~~~l~~~~~lg~g~fG~v~~~~~~~~~~~~~~~~~~VaVK~~k~~~~~~~~~~~~~El~~m~~~g-~H~niv~ll  368 (609)
T KOG0200|consen  290 KWEIPRENLKLGKYLGEGAFGQVVKALLFGLSKALLSIYVTVAVKMLKENASSSEKKDLMSELNVLKELG-KHPNIVNLL  368 (609)
T ss_pred             ceeechhhccccceeecccccceEeEEEeecccccccceEEEEEEecccccCcHHHHHHHHHHHHHHHhc-CCcchhhhe
Confidence            56677777777789999999999999832    1    458999999865 3456778999999999986 699999999


Q ss_pred             cceecCCCcccchhhhhhhhhhhhhhhhcccceeeeeeecCCCCCc--ccCCHHHHHHHHHHHHHHHHHhhhc
Q 039630           99 GGCIDGPSRILAPLQASIEALFLFTKLWKMDKFISIYVVSGSKKNR--VKFNWIARREIALGIARGLAYIHEE  169 (174)
Q Consensus        99 ~~~~~~~~~~lv~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~qi~~gl~yLH~~  169 (174)
                      |+|...+..+++.  ++.+.+.+...+.............  ....  ..++..+++.+++|||.||+||++.
T Consensus       369 G~~t~~~~~~~v~--Ey~~~G~L~~~Lr~~r~~~~~~~~~--~~~~~~~~L~~~dLlsfa~QIa~GMe~L~~~  437 (609)
T KOG0200|consen  369 GACTQDGPLYVIV--EYAEHGDLLEFLRKKRVTESIDGSG--VFPNERDALTTKDLLSFAYQIANGMEYLASV  437 (609)
T ss_pred             eeeccCCceEEEE--EeccCCcHHHHHHhccccccccccC--CCccccCCcCHHHHHHHHHHHHHHHHHHhhC
Confidence            9999988888888  8888888888775544111000000  0111  2388999999999999999999774

>cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases

Probab=99.37  E-value=5.5e-12  Score=89.73  Aligned_cols=110  Identities=32%  Similarity=0.459  Sum_probs=83.0

Q ss_pred             ceecccCCeeEEEEEE-cC---CCEEEEEEeeccCc-cchhHHHHHHHHHhcccccCCCeeeeecceecCCCcccchhhh
Q 039630           40 NKIGEGGFGSVYKGRL-ED---GTVVAVNVLSVESK-QGETEFMSEVASMANINICHENLVKLHGGCIDGPSRILAPLQA  114 (174)
Q Consensus        40 ~~lg~G~~g~V~~~~~-~~---~~~~avK~~~~~~~-~~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~~~~~~~lv~~~~  114 (174)
                      +.||+|+||.||+|.+ ..   +..+++|.++.... .....+..|+.+++.++  |+|++++++.+. .+..++++  +
T Consensus         1 ~~ig~G~~g~v~~~~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~--h~~iv~~~~~~~-~~~~~~v~--e   75 (257)
T cd05060           1 KELGHGNFGSVVKGVYLMKSGKEVEVAVKTLKQEHIAAGKKEFLREASVMAQLD--HPCIVRLIGVCK-GEPLMLVM--E   75 (257)
T ss_pred             CccCccCceeEEEeEeeccCCCcceEEEEecccccchHHHHHHHHHHHHHHhcC--CCCeeeEEEEEc-CCceEEEE--E
Confidence            4689999999999983 22   26899999975532 24557889999999999  999999999775 44556666  6


Q ss_pred             hhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhcc
Q 039630          115 SIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEI  170 (174)
Q Consensus       115 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  170 (174)
                      +...+.+...+.                ....+++..++.++.|++.||+|||++.
T Consensus        76 ~~~~~~L~~~l~----------------~~~~~~~~~~~~~~~qi~~~l~~lh~~~  115 (257)
T cd05060          76 LAPLGPLLKYLK----------------KRREIPVSDLKELAHQVAMGMAYLESKH  115 (257)
T ss_pred             eCCCCcHHHHHH----------------hCCCCCHHHHHHHHHHHHHHHHHHhhcC
Confidence            655555554331                1124788899999999999999999754

Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi

>cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases

Probab=99.37  E-value=4.2e-12  Score=91.36  Aligned_cols=115  Identities=22%  Similarity=0.315  Sum_probs=89.7

Q ss_pred             eeecceecccCCeeEEEEEE-cCCCEEEEEEeeccCc--cchhHHHHHHHHHhcccccCCCeeeeecceecCCCcccchh
Q 039630           36 FRTSNKIGEGGFGSVYKGRL-EDGTVVAVNVLSVESK--QGETEFMSEVASMANINICHENLVKLHGGCIDGPSRILAPL  112 (174)
Q Consensus        36 ~~~~~~lg~G~~g~V~~~~~-~~~~~~avK~~~~~~~--~~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~~~~~~~lv~~  112 (174)
                      |...+.||+|++|.||++.. .++..+++|.++....  .....+..|+.+++.++  |+|++++++.+...+..++++ 
T Consensus         1 y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~--~~~i~~~~~~~~~~~~~~~v~-   77 (283)
T cd05118           1 YQKLGKIGEGTYGVVYKARDKLTGEIVAIKKIKLRFESEGIPKTALREIKLLKELN--HPNIIKLLDVFRHKGDLYLVF-   77 (283)
T ss_pred             CccceeeecCCCceEEEEEcCCCCcEEEEEEeccccccchhHHHHHHHHHHHHHhc--CCCcchHHHhhccCCCEEEEE-
Confidence            45568899999999999984 5688999999875532  24567888999999999  999999999999888888888 


Q ss_pred             hhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhcc
Q 039630          113 QASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEI  170 (174)
Q Consensus       113 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  170 (174)
                       ++.+. .+...+.               .....+++..+..++.|++.||.|||++.
T Consensus        78 -e~~~~-~l~~~l~---------------~~~~~~~~~~~~~~~~~i~~~l~~LH~~~  118 (283)
T cd05118          78 -EFMDT-DLYKLIK---------------DRQRGLPESLIKSYLYQLLQGLAFCHSHG  118 (283)
T ss_pred             -eccCC-CHHHHHH---------------hhcccCCHHHHHHHHHHHHHHHHHHHHCC
Confidence             55443 3333221               11235788999999999999999999864

Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They

>cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11

Probab=99.37  E-value=1.4e-12  Score=92.94  Aligned_cols=120  Identities=18%  Similarity=0.258  Sum_probs=86.8

Q ss_pred             CeeecceecccCCeeEEEEEE-cCCCEEEEEEeecc-----CccchhHHHHHHHHHhcccccCCCeeeeecceecCCCcc
Q 039630           35 GFRTSNKIGEGGFGSVYKGRL-EDGTVVAVNVLSVE-----SKQGETEFMSEVASMANINICHENLVKLHGGCIDGPSRI  108 (174)
Q Consensus        35 ~~~~~~~lg~G~~g~V~~~~~-~~~~~~avK~~~~~-----~~~~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~~~~~~~  108 (174)
                      .|.+.+.||+|+||.||++.. ..+..+++|+++..     .......+..|+.+++.++  |||++++++.+...+..+
T Consensus         1 ~y~i~~~ig~g~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~--h~~i~~~~~~~~~~~~~~   78 (260)
T cd08222           1 RYILQQRLGKGSFGTVYLVKDKKAVAEERLKVLKEIPVGELNPNETVQANQEAQLLSKLD--HPAIVKFHASFLERDAFC   78 (260)
T ss_pred             CceeeeeecCCCCceEEEEEecCCCCcceEEEeccccccccCcchHHHHHHHHHHHHhCC--CCcHHHHHHHHhcCCceE
Confidence            367789999999999999983 33445566665432     1223345667889999999  999999999998888888


Q ss_pred             cchhhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhcc
Q 039630          109 LAPLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEI  170 (174)
Q Consensus       109 lv~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  170 (174)
                      +++  ++..+..+...+...            ......+++..++.++.|++.||.|||+..
T Consensus        79 lv~--e~~~~~~l~~~~~~~------------~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~  126 (260)
T cd08222          79 IIT--EYCEGRDLDCKLEEL------------KHTGKTLSENQVCEWFIQLLLGVHYMHQRR  126 (260)
T ss_pred             EEE--EeCCCCCHHHHHHHH------------hhcccccCHHHHHHHHHHHHHHHHHHHHcC
Confidence            887  665555544322110            112235788999999999999999999864

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check

>cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3

Probab=99.36  E-value=6.7e-12  Score=91.99  Aligned_cols=115  Identities=24%  Similarity=0.337  Sum_probs=87.9

Q ss_pred             eeecceecccCCeeEEEEE-EcCCCEEEEEEeeccCc---cchhHHHHHHHHHhcccccCCCeeeeecceecCCCcccch
Q 039630           36 FRTSNKIGEGGFGSVYKGR-LEDGTVVAVNVLSVESK---QGETEFMSEVASMANINICHENLVKLHGGCIDGPSRILAP  111 (174)
Q Consensus        36 ~~~~~~lg~G~~g~V~~~~-~~~~~~~avK~~~~~~~---~~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~~~~~~~lv~  111 (174)
                      |...+.||+|+||.||++. ..++..+++|.+.....   .....+..|+.+++.++  |+|++++.+.+...+..++++
T Consensus        23 ~~~~~~lg~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~E~~~l~~l~--h~~iv~~~~~~~~~~~~~lv~  100 (313)
T cd06633          23 FVGLHEIGHGSFGAVYFATNSHTNEVVAVKKMSYSGKQTNEKWQDIIKEVKFLQQLK--HPNTIEYKGCYLKEHTAWLVM  100 (313)
T ss_pred             hhcceeeccCCCeEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHHhCC--CCCCccEEEEEEeCCEEEEEE
Confidence            5556789999999999998 45688999999875422   23456788999999999  999999999999988888888


Q ss_pred             hhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhcc
Q 039630          112 LQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEI  170 (174)
Q Consensus       112 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  170 (174)
                        ++..+ .+...+.               .....+++..+..++.|++.++.|||++.
T Consensus       101 --e~~~~-~l~~~l~---------------~~~~~l~~~~~~~~~~qi~~al~~LH~~g  141 (313)
T cd06633         101 --EYCLG-SASDLLE---------------VHKKPLQEVEIAAITHGALQGLAYLHSHN  141 (313)
T ss_pred             --ecCCC-CHHHHHH---------------hcCCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence              44432 2222110               11234788888999999999999999864

Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co

>KOG0984 consensus Mitogen-activated protein kinase (MAPK) kinase MKK3/MKK6 [Signal transduction mechanisms]

Probab=99.36  E-value=3.3e-12  Score=86.07  Aligned_cols=137  Identities=15%  Similarity=0.229  Sum_probs=104.2

Q ss_pred             cccceechhhHHhhcCCeeecceecccCCeeEEEEE-EcCCCEEEEEEeecc-CccchhHHHHHHHHHhcccccCCCeee
Q 039630           19 YKFSKISYNELKIATNGFRTSNKIGEGGFGSVYKGR-LEDGTVVAVNVLSVE-SKQGETEFMSEVASMANINICHENLVK   96 (174)
Q Consensus        19 ~~~~~~~~~~~~~~~~~~~~~~~lg~G~~g~V~~~~-~~~~~~~avK~~~~~-~~~~~~~~~~e~~~l~~l~~~h~~i~~   96 (174)
                      ..+-.+..+.+....+++..+..||+|++|.|-+-+ .++|...|+|.+... +.+.....++|+.+..+.. +.|.++.
T Consensus        31 ~a~i~I~~~~~eV~ad~L~~i~elGrGayG~vekmrh~~sg~imAvKri~~tvn~q~q~r~L~dldi~~r~~-~CPf~V~  109 (282)
T KOG0984|consen   31 RALIYIGDRNFEVPADDLVGIEELGRGAYGVVEKMRHIQSGTIMAVKRIRATVNSQEQKRLLMDLDIIMRTV-DCPFTVH  109 (282)
T ss_pred             CceEEEecCccccchhhhhhhhhhcCCccchhhheeeccCCeEEEEeeehhhcChHHHHHHHHhhhhhccCC-CCCeEEE
Confidence            334456666677778888889999999999998877 678999999999866 4455677899999776654 4899999


Q ss_pred             eecceecCCCcccchhhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhccC
Q 039630           97 LHGGCIDGPSRILAPLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEIK  171 (174)
Q Consensus        97 ~~~~~~~~~~~~lv~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~~  171 (174)
                      ++|...+..+.++.|+......--+..+.               ......+++..+-++|..+..||.|||++.+
T Consensus       110 FyGa~~regdvwIcME~M~tSldkfy~~v---------------~~~g~~ipE~vlGkIa~Svv~al~~L~~kL~  169 (282)
T KOG0984|consen  110 FYGALFREGDVWICMELMDTSLDKFYRKV---------------LKKGGTIPEDVLGKIAVSVVHALEFLHSKLS  169 (282)
T ss_pred             eehhhhccccEEEeHHHhhhhHHHHHHHH---------------HhcCCcCchHHhhHhHHHHHHHHHHHHHHhh
Confidence            99999999888887733322222222222               1234568999999999999999999988754

>cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases

Probab=99.36  E-value=4.2e-12  Score=91.32  Aligned_cols=115  Identities=25%  Similarity=0.341  Sum_probs=89.9

Q ss_pred             eeecceecccCCeeEEEEE-EcCCCEEEEEEeeccC--ccchhHHHHHHHHHhcccccCCCeeeeecceecCCCcccchh
Q 039630           36 FRTSNKIGEGGFGSVYKGR-LEDGTVVAVNVLSVES--KQGETEFMSEVASMANINICHENLVKLHGGCIDGPSRILAPL  112 (174)
Q Consensus        36 ~~~~~~lg~G~~g~V~~~~-~~~~~~~avK~~~~~~--~~~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~~~~~~~lv~~  112 (174)
                      |+..+.||+|.+|.||+|. ..+++.+++|.+....  ......+..|+.+++.++  |+|++++.+.+...+..++++ 
T Consensus         1 y~~~~~ig~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~--~~~i~~~~~~~~~~~~~~~v~-   77 (282)
T cd07829           1 YEKLEKLGEGTYGVVYKARDKKTGEIVALKKIRLDNEEEGIPSTALREISLLKELK--HPNIVKLLDVIHTERKLYLVF-   77 (282)
T ss_pred             CeeehcccccCcceEEEeeecCCCcEEEEEEeccccccccccHHHHHHHHHHHhcC--CCCHHHHHhhhhcCCceEEEe-
Confidence            4556889999999999999 4568999999998653  334566788999999999  999999999999888888888 


Q ss_pred             hhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhcc
Q 039630          113 QASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEI  170 (174)
Q Consensus       113 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  170 (174)
                       ++.+. .+...+.               .....+++..+..++.|++.||.|||++.
T Consensus        78 -e~~~~-~l~~~i~---------------~~~~~~~~~~~~~~~~~i~~~l~~LH~~~  118 (282)
T cd07829          78 -EYCDM-DLKKYLD---------------KRPGPLSPNLIKSIMYQLLRGLAYCHSHR  118 (282)
T ss_pred             -cCcCc-CHHHHHH---------------hhccCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence             55442 3333221               11134788999999999999999999864

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the

>cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase

Probab=99.36  E-value=7.8e-12  Score=93.09  Aligned_cols=116  Identities=18%  Similarity=0.210  Sum_probs=86.0

Q ss_pred             hcCCeeecceecccCCeeEEEEE-EcCCCEEEEEEeecc--CccchhHHHHHHHHHhcccccCCCeeeeecceecCC---
Q 039630           32 ATNGFRTSNKIGEGGFGSVYKGR-LEDGTVVAVNVLSVE--SKQGETEFMSEVASMANINICHENLVKLHGGCIDGP---  105 (174)
Q Consensus        32 ~~~~~~~~~~lg~G~~g~V~~~~-~~~~~~~avK~~~~~--~~~~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~~~~---  105 (174)
                      ..+.|+..+.||+|+||.||++. ..++..+|+|.+...  .......+.+|+.++..++  |+|++++++.+....   
T Consensus        14 ~~~~y~~~~~lg~g~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~--h~~iv~~~~~~~~~~~~~   91 (353)
T cd07850          14 VLKRYQNLKPIGSGAQGIVCAAYDTVTGQNVAIKKLSRPFQNVTHAKRAYRELVLMKLVN--HKNIIGLLNVFTPQKSLE   91 (353)
T ss_pred             hhcceEEEEEeccCCCEEEEEEEECCCCCEEEEEecCccccChhHHHHHHHHHHHHHhcC--CCCCcceeeeeccCCCcc
Confidence            34679999999999999999998 567899999998643  2233456778999999999  999999999876443   


Q ss_pred             ---CcccchhhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhcc
Q 039630          106 ---SRILAPLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEI  170 (174)
Q Consensus       106 ---~~~lv~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  170 (174)
                         ..++++  ++... .+...+                .  ..++...+..++.|++.||+|||++.
T Consensus        92 ~~~~~~lv~--e~~~~-~l~~~~----------------~--~~l~~~~~~~~~~ql~~aL~~LH~~g  138 (353)
T cd07850          92 EFQDVYLVM--ELMDA-NLCQVI----------------Q--MDLDHERMSYLLYQMLCGIKHLHSAG  138 (353)
T ss_pred             ccCcEEEEE--eccCC-CHHHHH----------------h--hcCCHHHHHHHHHHHHHHHHHHHhCC
Confidence               345555  43332 221111                0  12677888889999999999999864

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK

>KOG0668 consensus Casein kinase II, alpha subunit [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning; Transcription]

Probab=99.35  E-value=1.4e-12  Score=89.15  Aligned_cols=114  Identities=15%  Similarity=0.235  Sum_probs=88.3

Q ss_pred             CCeeecceecccCCeeEEEEE-EcCCCEEEEEEeeccCccchhHHHHHHHHHhcccccCCCeeeeecceecCCCcccchh
Q 039630           34 NGFRTSNKIGEGGFGSVYKGR-LEDGTVVAVNVLSVESKQGETEFMSEVASMANINICHENLVKLHGGCIDGPSRILAPL  112 (174)
Q Consensus        34 ~~~~~~~~lg~G~~g~V~~~~-~~~~~~~avK~~~~~~~~~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~~~~~~~lv~~  112 (174)
                      ++|++.+++|+|.|+.||.|. ..+.+.+++|+++   +-..+.+.+|+.||..+. +++||+++++...++........
T Consensus        38 ddYeivrk~GRGKYSEVFeg~~~~~~eK~ViKiLK---PVkkkKIkREikIL~nL~-gg~NIi~L~DiV~Dp~SktpaLi  113 (338)
T KOG0668|consen   38 DDYEIVRKVGRGKYSEVFEGINITNNEKCVIKILK---PVKKKKIKREIKILQNLR-GGPNIIKLLDIVKDPESKTPSLI  113 (338)
T ss_pred             chHHHHHHHcCccHhhHhcccccCCCceEEEeeec---hHHHHHHHHHHHHHHhcc-CCCCeeehhhhhcCccccCchhH
Confidence            479999999999999999998 6778899999997   445567899999999997 79999999999988755332222


Q ss_pred             hhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhcc
Q 039630          113 QASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEI  170 (174)
Q Consensus       113 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  170 (174)
                      +++..+...-..+                   ..++-..+..++.+++.||+|+|+..
T Consensus       114 FE~v~n~Dfk~ly-------------------~tl~d~dIryY~~elLkALdyCHS~G  152 (338)
T KOG0668|consen  114 FEYVNNTDFKQLY-------------------PTLTDYDIRYYIYELLKALDYCHSMG  152 (338)
T ss_pred             hhhhccccHHHHh-------------------hhhchhhHHHHHHHHHHHHhHHHhcC
Confidence            2555555443322                   13566677889999999999998753

>cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases

Probab=99.35  E-value=7.5e-12  Score=89.13  Aligned_cols=111  Identities=18%  Similarity=0.119  Sum_probs=81.9

Q ss_pred             ceecccCCeeEEEEE-EcCCCEEEEEEeeccCc---cchhHHHHHHHHHh-cccccCCCeeeeecceecCCCcccchhhh
Q 039630           40 NKIGEGGFGSVYKGR-LEDGTVVAVNVLSVESK---QGETEFMSEVASMA-NINICHENLVKLHGGCIDGPSRILAPLQA  114 (174)
Q Consensus        40 ~~lg~G~~g~V~~~~-~~~~~~~avK~~~~~~~---~~~~~~~~e~~~l~-~l~~~h~~i~~~~~~~~~~~~~~lv~~~~  114 (174)
                      +.||+|+||.||++. ..+++.+|+|.++....   .....+..|..++. ..+  |+|++++++.+...+..++++  +
T Consensus         2 ~~l~~g~~~~v~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~~~~~~~--~~~i~~~~~~~~~~~~~~lv~--e   77 (260)
T cd05611           2 KPISKGAFGSVYLAKKRSTGDYFAIKVLKKSDMIAKNQVTNVKAERAIMMIQGE--SPYVAKLYYSFQSKDYLYLVM--E   77 (260)
T ss_pred             ccCCcCCCeeEEEEEecCCCCeEEEEEecchhhhHHHHHHHHHHHHHHHhhcCC--CCCeeeeeeeEEcCCeEEEEE--e
Confidence            578999999999998 45688999999864421   11223444544443 445  999999999999888888888  7


Q ss_pred             hhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhcc
Q 039630          115 SIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEI  170 (174)
Q Consensus       115 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  170 (174)
                      +.+++.+...+.                ....+++..+..++.|++.||.|||++.
T Consensus        78 ~~~~~~L~~~l~----------------~~~~~~~~~~~~i~~qi~~aL~~lH~~~  117 (260)
T cd05611          78 YLNGGDCASLIK----------------TLGGLPEDWAKQYIAEVVLGVEDLHQRG  117 (260)
T ss_pred             ccCCCCHHHHHH----------------HcCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            766666654321                1124688888999999999999999863

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do

>cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases

Probab=99.35  E-value=1.5e-11  Score=88.67  Aligned_cols=118  Identities=24%  Similarity=0.342  Sum_probs=83.3

Q ss_pred             eeecceecccCCeeEEEEEEc-CCCEEEEEEeeccCc--cchhHHHHHHHHHhccc-ccCCCeeeeecceecCCC-----
Q 039630           36 FRTSNKIGEGGFGSVYKGRLE-DGTVVAVNVLSVESK--QGETEFMSEVASMANIN-ICHENLVKLHGGCIDGPS-----  106 (174)
Q Consensus        36 ~~~~~~lg~G~~g~V~~~~~~-~~~~~avK~~~~~~~--~~~~~~~~e~~~l~~l~-~~h~~i~~~~~~~~~~~~-----  106 (174)
                      |+..+.||+|+||.||++..+ ++..+|+|.++....  .....+..|+.++..+. +.|+|++++.+.+...+.     
T Consensus         1 y~~~~~l~~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~~~~~~   80 (287)
T cd07838           1 YEELAEIGEGAYGTVYKARDLNTGRFVALKKVRVPLSEEGIPLSTLREIALLKQLESFEHPNIVRLLDVCHGPRTDRELK   80 (287)
T ss_pred             CeEEEEecccCceEEEEEEECCCCCEEEEEEeccccccchhhhhHHHHHHHHHHhhccCCCCcceEEEEEeeccCCCCce
Confidence            466789999999999999954 588999999975422  22345667777766541 129999999999988766     


Q ss_pred             cccchhhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhcc
Q 039630          107 RILAPLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEI  170 (174)
Q Consensus       107 ~~lv~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  170 (174)
                      .++++  ++... .+...+.              ......+++..+..++.|++.||+|||+..
T Consensus        81 ~~l~~--e~~~~-~l~~~l~--------------~~~~~~l~~~~~~~~~~~i~~al~~LH~~~  127 (287)
T cd07838          81 LTLVF--EHVDQ-DLATYLS--------------KCPKPGLPPETIKDLMRQLLRGVDFLHSHR  127 (287)
T ss_pred             eEEEe--hhccc-CHHHHHH--------------HccCCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            66666  44432 2222110              011124788999999999999999999864

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both

>cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases

Probab=99.35  E-value=5.4e-12  Score=90.89  Aligned_cols=117  Identities=27%  Similarity=0.360  Sum_probs=87.8

Q ss_pred             eeecceecccCCeeEEEEEE-cCCCEEEEEEeeccCc-cchhHHHHHHHHHhcccccCCCeeeeecceecCCCcccchhh
Q 039630           36 FRTSNKIGEGGFGSVYKGRL-EDGTVVAVNVLSVESK-QGETEFMSEVASMANINICHENLVKLHGGCIDGPSRILAPLQ  113 (174)
Q Consensus        36 ~~~~~~lg~G~~g~V~~~~~-~~~~~~avK~~~~~~~-~~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~~~~~~~lv~~~  113 (174)
                      |.+.+.||+|++|.||+|.. .++..+++|.+..... .......+|+..+..+. .|+|++++++.+...+..++++  
T Consensus         1 y~~~~~ig~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~-~h~~i~~~~~~~~~~~~~~lv~--   77 (283)
T cd07830           1 YKVIKQLGDGTFGSVYLARNKETGELVAIKKMKKKFYSWEECMNLREVKSLRKLN-EHPNIVKLKEVFRENDELYFVF--   77 (283)
T ss_pred             CeeheeeccCCceEEEEEEECCCCcEEEEEEehhhccchhHHHHHHHHHHHHhcc-CCCCchhHHHHhhcCCcEEEEE--
Confidence            45678999999999999995 4578899999865422 22334456888887775 5999999999999988888888  


Q ss_pred             hhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhcc
Q 039630          114 ASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEI  170 (174)
Q Consensus       114 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  170 (174)
                      ++. .+.+...+..              .....+++..++.++.|++.+|.|||++.
T Consensus        78 e~~-~~~l~~~~~~--------------~~~~~~~~~~~~~~~~~l~~~l~~Lh~~~  119 (283)
T cd07830          78 EYM-EGNLYQLMKD--------------RKGKPFSESVIRSIIYQILQGLAHIHKHG  119 (283)
T ss_pred             ecC-CCCHHHHHHh--------------cccccCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            555 4444443311              11235789999999999999999999865

Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili

>cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2

Probab=99.35  E-value=4.7e-12  Score=92.57  Aligned_cols=116  Identities=22%  Similarity=0.345  Sum_probs=88.4

Q ss_pred             CeeecceecccCCeeEEEEE-EcCCCEEEEEEeeccC---ccchhHHHHHHHHHhcccccCCCeeeeecceecCCCcccc
Q 039630           35 GFRTSNKIGEGGFGSVYKGR-LEDGTVVAVNVLSVES---KQGETEFMSEVASMANINICHENLVKLHGGCIDGPSRILA  110 (174)
Q Consensus        35 ~~~~~~~lg~G~~g~V~~~~-~~~~~~~avK~~~~~~---~~~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~~~~~~~lv  110 (174)
                      .|...+.||+|+||.||++. ..++..+++|.+....   ......+.+|+.+++.++  |+|++++.+.+...+..+++
T Consensus        16 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~--h~~i~~~~~~~~~~~~~~lv   93 (308)
T cd06634          16 LFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLR--HPNTIQYRGCYLREHTAWLV   93 (308)
T ss_pred             HHHHHHheeeCCCEEEEEEEEcCCCcEEEEEEEecccccChHHHHHHHHHHHHHHhCC--CCCcccEEEEEEcCCeeEEE
Confidence            46667889999999999999 4567899999986432   223456788999999999  99999999999988888888


Q ss_pred             hhhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhcc
Q 039630          111 PLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEI  170 (174)
Q Consensus       111 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  170 (174)
                      +  ++..+ .+...+.               .....+++..+..++.|++.||.|||++.
T Consensus        94 ~--e~~~~-~l~~~~~---------------~~~~~l~~~~~~~~~~~l~~~l~~LH~~~  135 (308)
T cd06634          94 M--EYCLG-SASDLLE---------------VHKKPLQEVEIAAVTHGALQGLAYLHSHN  135 (308)
T ss_pred             E--EccCC-CHHHHHH---------------HcCCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            8  54432 3322221               11224678888899999999999999864

Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin

>cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron

Probab=99.35  E-value=6.6e-12  Score=89.46  Aligned_cols=112  Identities=23%  Similarity=0.320  Sum_probs=79.9

Q ss_pred             ceecccCCeeEEEEEEc----CCCEEEEEEeecc-CccchhHHHHHHHHHhcccccCCCeeeeecceec-CCCcccchhh
Q 039630           40 NKIGEGGFGSVYKGRLE----DGTVVAVNVLSVE-SKQGETEFMSEVASMANINICHENLVKLHGGCID-GPSRILAPLQ  113 (174)
Q Consensus        40 ~~lg~G~~g~V~~~~~~----~~~~~avK~~~~~-~~~~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~~-~~~~~lv~~~  113 (174)
                      +.||+|+||.||+|...    ....+|+|.+... .......+..|+.+++.++  |+|++++++.+.. .+..++++  
T Consensus         1 ~~lg~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~--h~~iv~~~~~~~~~~~~~~lv~--   76 (262)
T cd05058           1 RVIGKGHFGCVYHGTLIDSDGQKIHCAVKSLNRITDLEEVEQFLKEGIIMKDFS--HPNVLSLLGICLPSEGSPLVVL--   76 (262)
T ss_pred             CcccccCCceEEEEEEecCCCceEEEEEEecCccCCHHHHHHHHHHHHHHccCC--CCCcceEEEEeecCCCCcEEEE--
Confidence            36899999999999842    2357899988533 2334567888999999998  9999999997754 34455555  


Q ss_pred             hhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhcc
Q 039630          114 ASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEI  170 (174)
Q Consensus       114 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  170 (174)
                      ++...+.+...+.               ......++..++.++.|++.||.|||+..
T Consensus        77 e~~~~~~L~~~~~---------------~~~~~~~~~~~~~~~~~i~~~l~~lH~~~  118 (262)
T cd05058          77 PYMKHGDLRNFIR---------------SETHNPTVKDLIGFGLQVAKGMEYLASKK  118 (262)
T ss_pred             ecCCCCCHHHHHH---------------hcCCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            5555555544321               11123466777889999999999999853

Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca

>cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3

Probab=99.34  E-value=1.3e-11  Score=89.07  Aligned_cols=110  Identities=25%  Similarity=0.244  Sum_probs=80.4

Q ss_pred             eecccCCeeEEEEE-EcCCCEEEEEEeeccCc---cchhHHHHHHHHHh---cccccCCCeeeeecceecCCCcccchhh
Q 039630           41 KIGEGGFGSVYKGR-LEDGTVVAVNVLSVESK---QGETEFMSEVASMA---NINICHENLVKLHGGCIDGPSRILAPLQ  113 (174)
Q Consensus        41 ~lg~G~~g~V~~~~-~~~~~~~avK~~~~~~~---~~~~~~~~e~~~l~---~l~~~h~~i~~~~~~~~~~~~~~lv~~~  113 (174)
                      .||+|+||.||++. ..++..+|+|.+.....   ........|..++.   ...  |++++.+.+.+...+..++++  
T Consensus         1 ~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~i~~~~~~~~~~~~~~lv~--   76 (279)
T cd05633           1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGD--CPFIVCMTYAFHTPDKLCFIL--   76 (279)
T ss_pred             CcccCCCeEEEEEEECCCCcEEEEEEEEccccccchHHHHHHHHHHHHHHHhhCC--CCcEeEEEEEEecCCeEEEEE--
Confidence            48999999999998 45688999999975421   11222344443333   345  899999999998888888888  


Q ss_pred             hhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhcc
Q 039630          114 ASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEI  170 (174)
Q Consensus       114 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  170 (174)
                      ++.+++.+...+.                ....+++..+..++.|++.||+|||++.
T Consensus        77 e~~~~~~L~~~i~----------------~~~~l~~~~~~~i~~qi~~al~~lH~~~  117 (279)
T cd05633          77 DLMNGGDLHYHLS----------------QHGVFSEKEMRFYATEIILGLEHMHNRF  117 (279)
T ss_pred             ecCCCCCHHHHHH----------------hcCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            7777666654321                1234789999999999999999999864

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi

>cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase

Probab=99.33  E-value=1.8e-11  Score=90.81  Aligned_cols=114  Identities=20%  Similarity=0.236  Sum_probs=84.1

Q ss_pred             CCeeecceecccCCeeEEEEE-EcCCCEEEEEEeeccC--ccchhHHHHHHHHHhcccccCCCeeeeecceecCCC----
Q 039630           34 NGFRTSNKIGEGGFGSVYKGR-LEDGTVVAVNVLSVES--KQGETEFMSEVASMANINICHENLVKLHGGCIDGPS----  106 (174)
Q Consensus        34 ~~~~~~~~lg~G~~g~V~~~~-~~~~~~~avK~~~~~~--~~~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~~~~~----  106 (174)
                      ++|...+.||+|+||.||+|. ..++..+|+|.++...  ......+.+|+.+++.+.  |+|++++.+++.....    
T Consensus        15 ~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~--h~niv~~~~~~~~~~~~~~~   92 (342)
T cd07879          15 ERYTSLKQVGSGAYGSVCSAIDKRTGEKVAIKKLSRPFQSEIFAKRAYRELTLLKHMQ--HENVIGLLDVFTSAVSGDEF   92 (342)
T ss_pred             cceEEEEEeeecCCeEEEEEEeCCCCcEEEEEEecCccccccchhHHHHHHHHHHhcC--CCCccchhheecccccCCCC
Confidence            579999999999999999998 4578999999987542  223456788999999999  9999999998865532    


Q ss_pred             --cccchhhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhcc
Q 039630          107 --RILAPLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEI  170 (174)
Q Consensus       107 --~~lv~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  170 (174)
                        .++++  ++... .+.. +                 ....+++..+..++.|++.||+|||++.
T Consensus        93 ~~~~lv~--e~~~~-~l~~-~-----------------~~~~~~~~~~~~~~~qi~~aL~~LH~~~  137 (342)
T cd07879          93 QDFYLVM--PYMQT-DLQK-I-----------------MGHPLSEDKVQYLVYQMLCGLKYIHSAG  137 (342)
T ss_pred             ceEEEEe--ccccc-CHHH-H-----------------HcCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence              24444  22211 1111 0                 0124688888899999999999999864

Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13

>PHA03210 serine/threonine kinase US3; Provisional

Probab=99.33  E-value=3.9e-12  Score=98.84  Aligned_cols=122  Identities=16%  Similarity=0.257  Sum_probs=78.7

Q ss_pred             cCCeeecceecccCCeeEEEEEEc--CCCEEEEEEee--------------c---cCccchhHHHHHHHHHhcccccCCC
Q 039630           33 TNGFRTSNKIGEGGFGSVYKGRLE--DGTVVAVNVLS--------------V---ESKQGETEFMSEVASMANINICHEN   93 (174)
Q Consensus        33 ~~~~~~~~~lg~G~~g~V~~~~~~--~~~~~avK~~~--------------~---~~~~~~~~~~~e~~~l~~l~~~h~~   93 (174)
                      .++|++++.||+|+||.||+|..+  .+...+.|.+.              .   ........+.+|+.++..++  |+|
T Consensus       147 ~~~Y~ii~~LG~G~fG~Vyl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~Ei~il~~l~--Hpn  224 (501)
T PHA03210        147 LAHFRVIDDLPAGAFGKIFICALRASTEEAEARRGVNSTNQGKPKCERLIAKRVKAGSRAAIQLENEILALGRLN--HEN  224 (501)
T ss_pred             hhccEEEeEecCCCCcceEEEEEeccchhhhhhhccccccccchhhhhhHhHHhhcchHHHHHHHHHHHHHHhCC--CCC
Confidence            367999999999999999998742  22222222110              0   01122345788999999999  999


Q ss_pred             eeeeecceecCCCcccchhhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhcc
Q 039630           94 LVKLHGGCIDGPSRILAPLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEI  170 (174)
Q Consensus        94 i~~~~~~~~~~~~~~lv~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  170 (174)
                      |+++++++...+..++++  +.... .+...+....           ..............++.|++.||.|||++.
T Consensus       225 Iv~l~~~~~~~~~~~lv~--e~~~~-~l~~~l~~~~-----------~~~~~~~~~~~~~~i~~ql~~aL~yLH~~g  287 (501)
T PHA03210        225 ILKIEEILRSEANTYMIT--QKYDF-DLYSFMYDEA-----------FDWKDRPLLKQTRAIMKQLLCAVEYIHDKK  287 (501)
T ss_pred             cCcEeEEEEECCeeEEEE--ecccc-CHHHHHhhcc-----------ccccccccHHHHHHHHHHHHHHHHHHHhCC
Confidence            999999999888887776  33322 2222111110           000112335567789999999999999864

>cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases

Probab=99.32  E-value=7.9e-12  Score=88.38  Aligned_cols=109  Identities=27%  Similarity=0.299  Sum_probs=86.8

Q ss_pred             ecccCCeeEEEEEE-cCCCEEEEEEeeccCc---cchhHHHHHHHHHhcccccCCCeeeeecceecCCCcccchhhhhhh
Q 039630           42 IGEGGFGSVYKGRL-EDGTVVAVNVLSVESK---QGETEFMSEVASMANINICHENLVKLHGGCIDGPSRILAPLQASIE  117 (174)
Q Consensus        42 lg~G~~g~V~~~~~-~~~~~~avK~~~~~~~---~~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~~~~~~~lv~~~~~~~  117 (174)
                      ||+|+||.||.+.. .++..+++|++.....   .....+..|+.+++.++  |+|++++++.+...+..++++  ++..
T Consensus         1 lg~G~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~l~--h~~i~~~~~~~~~~~~~~~v~--e~~~   76 (250)
T cd05123           1 LGKGSFGKVLLVRKKDTGKLYAMKVLKKKKIIKRKEVEHTLTERNILSRIN--HPFIVKLHYAFQTEEKLYLVL--EYAP   76 (250)
T ss_pred             CCCCCceEEEEEEECCCCcEEEEEEeehhhhcchHHHHHHHHHHHHHHHcC--CCcHHHHHHHeecCCeeEEEE--ecCC
Confidence            68999999999984 4588999999875522   24557888999999999  999999999999888888888  6665


Q ss_pred             hhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhcc
Q 039630          118 ALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEI  170 (174)
Q Consensus       118 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  170 (174)
                      .+.+...+.                ....+++..+..++.|++.|+.|||++.
T Consensus        77 ~~~L~~~l~----------------~~~~l~~~~~~~~~~qi~~~l~~lh~~~  113 (250)
T cd05123          77 GGELFSHLS----------------KEGRFSEERARFYAAEIVLALEYLHSLG  113 (250)
T ss_pred             CCcHHHHHH----------------hcCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            566554331                1124788888999999999999999854

Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the

>cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15

Probab=99.32  E-value=7.6e-12  Score=92.54  Aligned_cols=116  Identities=21%  Similarity=0.287  Sum_probs=86.2

Q ss_pred             cCCeeecceecccCCeeEEEEEE-cCCCEEEEEEeecc--CccchhHHHHHHHHHhcc-cccCCCeeeeecceecCC--C
Q 039630           33 TNGFRTSNKIGEGGFGSVYKGRL-EDGTVVAVNVLSVE--SKQGETEFMSEVASMANI-NICHENLVKLHGGCIDGP--S  106 (174)
Q Consensus        33 ~~~~~~~~~lg~G~~g~V~~~~~-~~~~~~avK~~~~~--~~~~~~~~~~e~~~l~~l-~~~h~~i~~~~~~~~~~~--~  106 (174)
                      .++|...+.||+|+||.||+|.. .++..+++|.+...  .......+.+|+.++.++ +  |+||+++++.+...+  .
T Consensus         6 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~E~~~l~~l~~--h~ni~~~~~~~~~~~~~~   83 (337)
T cd07852           6 LRKYEILQKLGKGAYGIVWKAIDRRTKEVVALKKIFDAFRNATDAQRTFREIMFLQELGD--HPNIVKLLNVIKAENDKD   83 (337)
T ss_pred             hhHHHHhHhhcCCCCeeEEEEEEcCCCeEEEEEeeccccCcchhhhhhhHHHHHHHHhcC--CCCccceeeeeccCCCce
Confidence            35688889999999999999984 46889999988543  233345677899999999 8  999999999886543  3


Q ss_pred             cccchhhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhcc
Q 039630          107 RILAPLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEI  170 (174)
Q Consensus       107 ~~lv~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  170 (174)
                      .++++  ++... .+....                .. ..+++.....++.|++.||+|||+..
T Consensus        84 ~~lv~--e~~~~-~L~~~~----------------~~-~~~~~~~~~~i~~qi~~~L~~LH~~~  127 (337)
T cd07852          84 IYLVF--EYMET-DLHAVI----------------RA-NILEDVHKRYIMYQLLKALKYIHSGN  127 (337)
T ss_pred             EEEEe--ccccc-CHHHHH----------------hc-CCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            56666  55442 332211                11 14677888889999999999999853

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul

>cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase

Probab=99.31  E-value=3.2e-11  Score=86.93  Aligned_cols=110  Identities=24%  Similarity=0.247  Sum_probs=80.1

Q ss_pred             eecccCCeeEEEEE-EcCCCEEEEEEeeccCcc---chhHHHHHHH---HHhcccccCCCeeeeecceecCCCcccchhh
Q 039630           41 KIGEGGFGSVYKGR-LEDGTVVAVNVLSVESKQ---GETEFMSEVA---SMANINICHENLVKLHGGCIDGPSRILAPLQ  113 (174)
Q Consensus        41 ~lg~G~~g~V~~~~-~~~~~~~avK~~~~~~~~---~~~~~~~e~~---~l~~l~~~h~~i~~~~~~~~~~~~~~lv~~~  113 (174)
                      .||+|+||.||++. ..+++.+|+|.+......   ....+..|..   ++....  |++++.+.+.+...+..++++  
T Consensus         1 ~ig~g~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~i~~~~~~~~~~~~~~~v~--   76 (278)
T cd05606           1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGD--CPFIVCMSYAFHTPDKLSFIL--   76 (278)
T ss_pred             CcccCCCeEEEEEEEecCCCEEEEEEeeccccccchhHHHHHHHHHHHHHHHhCC--CCcEeeeeeeeecCCEEEEEE--
Confidence            47999999999998 456889999998754211   1112333433   334445  999999999999888888887  


Q ss_pred             hhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhcc
Q 039630          114 ASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEI  170 (174)
Q Consensus       114 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  170 (174)
                      ++..++.+...+                .....+++..+..++.|++.||.|||+..
T Consensus        77 e~~~g~~L~~~l----------------~~~~~l~~~~~~~~~~ql~~~l~~lH~~~  117 (278)
T cd05606          77 DLMNGGDLHYHL----------------SQHGVFSEAEMRFYAAEIILGLEHMHNRF  117 (278)
T ss_pred             ecCCCCcHHHHH----------------HhcCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            666666665432                11235789999999999999999999753

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co

>cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase

Probab=99.30  E-value=9.8e-12  Score=92.25  Aligned_cols=116  Identities=22%  Similarity=0.264  Sum_probs=87.0

Q ss_pred             cCCeeecceecccCCeeEEEEEE-cCCCEEEEEEeecc--CccchhHHHHHHHHHhcccccCCCeeeeecceecCCC---
Q 039630           33 TNGFRTSNKIGEGGFGSVYKGRL-EDGTVVAVNVLSVE--SKQGETEFMSEVASMANINICHENLVKLHGGCIDGPS---  106 (174)
Q Consensus        33 ~~~~~~~~~lg~G~~g~V~~~~~-~~~~~~avK~~~~~--~~~~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~~~~~---  106 (174)
                      .++|.....||+|++|.||++.. .++..+++|.+...  .......+.+|+.+++.+.  |+|++++.+.+...+.   
T Consensus        14 ~~~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~--h~~iv~~~~~~~~~~~~~~   91 (343)
T cd07851          14 PDRYQNLSPVGSGAYGQVCSAFDTKTGRKVAIKKLSRPFQSAIHAKRTYRELRLLKHMD--HENVIGLLDVFTPASSLED   91 (343)
T ss_pred             cCceEEEEEeccCCceEEEEEEECCCCcEEEEEecccccchhhHHHHHHHHHHHHHhcc--CCCHHHHHHHhhccccccc
Confidence            46799999999999999999994 56889999998643  2223456778999999998  9999999988766544   


Q ss_pred             ---cccchhhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhcc
Q 039630          107 ---RILAPLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEI  170 (174)
Q Consensus       107 ---~~lv~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  170 (174)
                         .++++  ++.. ..+....                 ....+++..+..++.|++.||+|||+..
T Consensus        92 ~~~~~lv~--e~~~-~~L~~~~-----------------~~~~l~~~~~~~~~~ql~~aL~~LH~~g  138 (343)
T cd07851          92 FQDVYLVT--HLMG-ADLNNIV-----------------KCQKLSDDHIQFLVYQILRGLKYIHSAG  138 (343)
T ss_pred             cccEEEEE--ecCC-CCHHHHH-----------------hcCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence               55665  3332 2222211                 1124788899999999999999999863

Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK

>PHA03390 pk1 serine/threonine-protein kinase 1; Provisional

Probab=99.30  E-value=3e-11  Score=86.62  Aligned_cols=112  Identities=16%  Similarity=0.150  Sum_probs=81.6

Q ss_pred             CCeeeccee--cccCCeeEEEEE-EcCCCEEEEEEeeccCccchhHHHHHHHHHhcc-cccCCCeeeeecceecCCCccc
Q 039630           34 NGFRTSNKI--GEGGFGSVYKGR-LEDGTVVAVNVLSVESKQGETEFMSEVASMANI-NICHENLVKLHGGCIDGPSRIL  109 (174)
Q Consensus        34 ~~~~~~~~l--g~G~~g~V~~~~-~~~~~~~avK~~~~~~~~~~~~~~~e~~~l~~l-~~~h~~i~~~~~~~~~~~~~~l  109 (174)
                      +.|.+.+.+  |+|+||.||++. ..++..+++|.++.......     |+.+...+ +  |+|++++++.+...+..++
T Consensus        14 ~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~-----e~~~~~~~~~--h~~iv~~~~~~~~~~~~~i   86 (267)
T PHA03390         14 KNCEIVKKLKLIDGKFGKVSVLKHKPTQKLFVQKIIKAKNFNAI-----EPMVHQLMKD--NPNFIKLYYSVTTLKGHVL   86 (267)
T ss_pred             HhhccccceeecCCCceEEEEEEEcCCCcEEEEEEEehhhcchh-----hHHHHHHhhc--CCCEEEEEEEEecCCeeEE
Confidence            345555555  999999999998 56788999999874422211     22222212 5  9999999999999888888


Q ss_pred             chhhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhcc
Q 039630          110 APLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEI  170 (174)
Q Consensus       110 v~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  170 (174)
                      ++  ++.+++.+...+.                ....+++..+..++.|++.||.|||+..
T Consensus        87 v~--e~~~~~~L~~~l~----------------~~~~l~~~~~~~~~~qi~~~l~~lH~~~  129 (267)
T PHA03390         87 IM--DYIKDGDLFDLLK----------------KEGKLSEAEVKKIIRQLVEALNDLHKHN  129 (267)
T ss_pred             EE--EcCCCCcHHHHHH----------------hcCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            88  7776666655331                1125789999999999999999999864

>KOG0695 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.29  E-value=2.4e-12  Score=92.63  Aligned_cols=119  Identities=18%  Similarity=0.165  Sum_probs=99.0

Q ss_pred             cCCeeecceecccCCeeEEEEE-EcCCCEEEEEEeecc---CccchhHHHHHHHHHhcccccCCCeeeeecceecCCCcc
Q 039630           33 TNGFRTSNKIGEGGFGSVYKGR-LEDGTVVAVNVLSVE---SKQGETEFMSEVASMANINICHENLVKLHGGCIDGPSRI  108 (174)
Q Consensus        33 ~~~~~~~~~lg~G~~g~V~~~~-~~~~~~~avK~~~~~---~~~~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~~~~~~~  108 (174)
                      .++|.++.+||+|+|++|..++ .++.+.+|+|++++.   ..++.+.+..|-.+..+.+ .||.++.+..+|.++..++
T Consensus       249 l~df~ll~vigrgsyakvl~~~~~~t~qiyamkvvkkel~nddedidwvqtek~vfe~as-n~pflvglhscfqtesrlf  327 (593)
T KOG0695|consen  249 LQDFDLLRVIGRGSYAKVLLVRLKKTDQIYAMKVVKKELVNDDEDIDWVQTEKHVFEQAS-NNPFLVGLHSCFQTESRLF  327 (593)
T ss_pred             cccceeeeeecCcchhhhhheehcccceeeehhhHHHHhcCCcccchhHHhhHHHHHhcc-CCCeEEehhhhhcccceEE
Confidence            3578999999999999999998 778999999999876   3455677888888887765 5899999999999999988


Q ss_pred             cchhhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhcc
Q 039630          109 LAPLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEI  170 (174)
Q Consensus       109 lv~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  170 (174)
                      .|.  ++..++.+.....                ....+++..+..+...|+.+|.|||++.
T Consensus       328 fvi--eyv~ggdlmfhmq----------------rqrklpeeharfys~ei~lal~flh~rg  371 (593)
T KOG0695|consen  328 FVI--EYVNGGDLMFHMQ----------------RQRKLPEEHARFYSAEICLALNFLHERG  371 (593)
T ss_pred             EEE--EEecCcceeeehh----------------hhhcCcHHHhhhhhHHHHHHHHHHhhcC
Confidence            888  8888888766442                1235888888999999999999999864

>cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1

Probab=99.28  E-value=4.4e-11  Score=88.36  Aligned_cols=116  Identities=20%  Similarity=0.205  Sum_probs=81.3

Q ss_pred             CeeecceecccCCeeEEEEEE-cC--CCEEEEEEeeccC--ccchhHHHHHHHHHhcccccCCCeeeeecceecC----C
Q 039630           35 GFRTSNKIGEGGFGSVYKGRL-ED--GTVVAVNVLSVES--KQGETEFMSEVASMANINICHENLVKLHGGCIDG----P  105 (174)
Q Consensus        35 ~~~~~~~lg~G~~g~V~~~~~-~~--~~~~avK~~~~~~--~~~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~~~----~  105 (174)
                      +|.+.+.||+|+||.||++.. ..  +..+|+|.++...  ......+.+|+.++..+. .|+||+++++.+...    .
T Consensus         1 ~y~~~~~lg~G~~g~vy~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~-~h~~iv~~~~~~~~~~~~~~   79 (332)
T cd07857           1 RYELIKELGQGAYGIVCSARNAETSEEETVAIKKITNVFSKKILAKRALRELKLLRHFR-GHKNITCLYDMDIVFPGNFN   79 (332)
T ss_pred             CceEEEEccccCCeEEEEEEeCCCCcCceEEEEEeccccccchhHHHHHHHHHHHHHhc-CCCChheeeeeeeeccccCC
Confidence            367789999999999999994 34  7789999987432  223456788999999883 399999999875432    2


Q ss_pred             CcccchhhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhcc
Q 039630          106 SRILAPLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEI  170 (174)
Q Consensus       106 ~~~lv~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  170 (174)
                      ..++++  ++.. ..+...+                .....+++..+..++.|++.||.|||++.
T Consensus        80 ~~~~~~--e~~~-~~L~~~l----------------~~~~~~~~~~~~~~~~qi~~aL~~LH~~g  125 (332)
T cd07857          80 ELYLYE--ELME-ADLHQII----------------RSGQPLTDAHFQSFIYQILCGLKYIHSAN  125 (332)
T ss_pred             cEEEEE--eccc-CCHHHHH----------------hcCCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            233333  2222 2222211                11234788999999999999999999864

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co

>cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein

Probab=99.28  E-value=1.5e-11  Score=90.02  Aligned_cols=112  Identities=16%  Similarity=0.097  Sum_probs=81.4

Q ss_pred             ceecccCCeeEEEEEEcCCCEEEEEEeecc--CccchhHHHHHHHHHhcccccCCCeeeeecceecCCCcccchhhhhhh
Q 039630           40 NKIGEGGFGSVYKGRLEDGTVVAVNVLSVE--SKQGETEFMSEVASMANINICHENLVKLHGGCIDGPSRILAPLQASIE  117 (174)
Q Consensus        40 ~~lg~G~~g~V~~~~~~~~~~~avK~~~~~--~~~~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~~~~~~~lv~~~~~~~  117 (174)
                      +.+|.|+++.|+++.. ++..+|+|.++..  .......+..|+.+++.++  |+||+++++.+...+..++++  ++..
T Consensus         8 ~~~~~~~~v~~~~~~~-~~~~~avK~~~~~~~~~~~~~~~~~Ei~~l~~l~--h~~i~~~~~~~~~~~~~~~~~--e~~~   82 (314)
T cd08216           8 KCFEDLMIVHLAKHKP-TNTLVAVKKINLDSCSKEDLKLLQQEIITSRQLQ--HPNILPYVTSFIVDSELYVVS--PLMA   82 (314)
T ss_pred             HhhcCCceEEEEEecC-CCCEEEEEEEeccccchhHHHHHHHHHHHHHhcC--CcchhhhhheeecCCeEEEEE--eccC
Confidence            4444444444444433 6889999999754  3345567999999999999  999999999999888888887  6666


Q ss_pred             hhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhcc
Q 039630          118 ALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEI  170 (174)
Q Consensus       118 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  170 (174)
                      .+.+...+..              .....+++..+..++.|++.||+|||++.
T Consensus        83 ~~~l~~~l~~--------------~~~~~~~~~~~~~~~~~l~~~L~~LH~~~  121 (314)
T cd08216          83 YGSCEDLLKT--------------HFPEGLPELAIAFILKDVLNALDYIHSKG  121 (314)
T ss_pred             CCCHHHHHHH--------------hcccCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            5555442211              01123678888899999999999999863

Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc

>KOG0612 consensus Rho-associated, coiled-coil containing protein kinase [Signal transduction mechanisms]

Probab=99.28  E-value=1.2e-12  Score=105.96  Aligned_cols=127  Identities=25%  Similarity=0.236  Sum_probs=100.4

Q ss_pred             hhhHHhhcCCeeecceecccCCeeEEEEE-EcCCCEEEEEEeeccC---ccchhHHHHHHHHHhcccccCCCeeeeecce
Q 039630           26 YNELKIATNGFRTSNKIGEGGFGSVYKGR-LEDGTVVAVNVLSVES---KQGETEFMSEVASMANINICHENLVKLHGGC  101 (174)
Q Consensus        26 ~~~~~~~~~~~~~~~~lg~G~~g~V~~~~-~~~~~~~avK~~~~~~---~~~~~~~~~e~~~l~~l~~~h~~i~~~~~~~  101 (174)
                      ..+++..+.+|.++++||+|+||.|...+ .++++.+|+|++.++.   ....+.|..|-.+|..-+  .++|+.+.-+|
T Consensus        67 v~~lrl~~~DfeilKvIGrGaFGEV~lVr~k~t~~VYAMK~lnK~eMlKr~~tA~F~EERDimv~~n--s~Wiv~LhyAF  144 (1317)
T KOG0612|consen   67 VKELRLKAEDFEILKVIGRGAFGEVALVRHKSTEKVYAMKILNKWEMLKRAETACFREERDIMVFGN--SEWIVQLHYAF  144 (1317)
T ss_pred             HHHHhCCHHhhHHHHHhcccccceeEEEEeeccccchhHHHhhHHHHhhchhHHHHHHHhHHHHcCC--cHHHHHHHHHh
Confidence            35667778899999999999999999988 6789999999998652   334567888999999888  99999999999


Q ss_pred             ecCCCcccchhhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHH------HHHhhhccCC
Q 039630          102 IDGPSRILAPLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARG------LAYIHEEIKT  172 (174)
Q Consensus       102 ~~~~~~~lv~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~g------l~yLH~~~~~  172 (174)
                      .+...+|+||  +|+++|.++..+.                +...+|+..+..++..|+.|      |.|+|+.+||
T Consensus       145 QD~~~LYlVM--dY~pGGDlltLlS----------------k~~~~pE~~ArFY~aEiVlAldslH~mgyVHRDiKP  203 (1317)
T KOG0612|consen  145 QDERYLYLVM--DYMPGGDLLTLLS----------------KFDRLPEDWARFYTAEIVLALDSLHSMGYVHRDIKP  203 (1317)
T ss_pred             cCccceEEEE--ecccCchHHHHHh----------------hcCCChHHHHHHHHHHHHHHHHHHHhccceeccCCc
Confidence            9999999999  8888888887442                22246766666666555555      5566777776

>PRK09188 serine/threonine protein kinase; Provisional

Probab=99.28  E-value=2e-11  Score=90.66  Aligned_cols=114  Identities=16%  Similarity=0.122  Sum_probs=78.5

Q ss_pred             hhhHHhhcCCeeecceecccCCeeEEEEEEc--CCCEEEEEEeeccC-----ccchhHHHHHHHHHhcccccCCCeee-e
Q 039630           26 YNELKIATNGFRTSNKIGEGGFGSVYKGRLE--DGTVVAVNVLSVES-----KQGETEFMSEVASMANINICHENLVK-L   97 (174)
Q Consensus        26 ~~~~~~~~~~~~~~~~lg~G~~g~V~~~~~~--~~~~~avK~~~~~~-----~~~~~~~~~e~~~l~~l~~~h~~i~~-~   97 (174)
                      -+.......+|...+.||+|+||.||+|...  ++..+|+|.+....     ......+.+|+.++..++  |+|++. +
T Consensus        10 ~~~~~~~~~~Y~~~~~IG~G~fg~Vy~a~~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~E~~iL~~L~--h~~iv~~l   87 (365)
T PRK09188         10 GDQIPALSARFVETAVLKRDVFSTVERGYFAGDPGTARAVRRRVSEVPWWSKPLARHLAAREIRALKTVR--GIGVVPQL   87 (365)
T ss_pred             ccccccccCCceEccEEeecCcEEEEEEEEcCCCCeEEEEEEecccccccccHHHHHHHHHHHHHHHhcc--CCCCCcEE
Confidence            3445555678999999999999999999843  57778999875331     122456899999999999  999884 4


Q ss_pred             ecceecCCCcccchhhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhcc
Q 039630           98 HGGCIDGPSRILAPLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEI  170 (174)
Q Consensus        98 ~~~~~~~~~~~lv~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  170 (174)
                      ++.    +..++++  ++.++..|.. .                ..   ..   ...++.|++.+|.|||++.
T Consensus        88 ~~~----~~~~LVm--E~~~G~~L~~-~----------------~~---~~---~~~~~~~i~~aL~~lH~~g  131 (365)
T PRK09188         88 LAT----GKDGLVR--GWTEGVPLHL-A----------------RP---HG---DPAWFRSAHRALRDLHRAG  131 (365)
T ss_pred             EEc----CCcEEEE--EccCCCCHHH-h----------------Cc---cc---hHHHHHHHHHHHHHHHHCC
Confidence            432    3456666  5555544431 0                00   01   1357789999999999853

>KOG1151 consensus Tousled-like protein kinase [Signal transduction mechanisms]

Probab=99.25  E-value=2.3e-12  Score=95.76  Aligned_cols=127  Identities=20%  Similarity=0.201  Sum_probs=93.4

Q ss_pred             hhHHhhcCCeeecceecccCCeeEEEEE-EcCCCEEEEEEeeccCc-------cchhHHHHHHHHHhcccccCCCeeeee
Q 039630           27 NELKIATNGFRTSNKIGEGGFGSVYKGR-LEDGTVVAVNVLSVESK-------QGETEFMSEVASMANINICHENLVKLH   98 (174)
Q Consensus        27 ~~~~~~~~~~~~~~~lg~G~~g~V~~~~-~~~~~~~avK~~~~~~~-------~~~~~~~~e~~~l~~l~~~h~~i~~~~   98 (174)
                      .+.....+.|.++..||+|+|+.||++. +...+-||||+-.....       .......+|-.|.+.++  ||-|++++
T Consensus       456 kDHptLn~RYLlLhLLGrGGFSEVyKAFDl~EqRYvAvKIHqlNK~WrdEKKeNYhKHAcREyrIHKeLD--HpRIVKlY  533 (775)
T KOG1151|consen  456 KDHPTLNDRYLLLHLLGRGGFSEVYKAFDLTEQRYVAVKIHQLNKNWRDEKKENYHKHACREYRIHKELD--HPRIVKLY  533 (775)
T ss_pred             ccCcchHHHHHHHHHhccccHHHHHHhcccchhheeeEeeehhccchhhHhhhhHHHHHHHHHhhhhccC--cceeeeee
Confidence            3444445678889999999999999999 66677899998764411       12345788999999999  99999999


Q ss_pred             cceecCCC-cccchhhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhccCCC
Q 039630           99 GGCIDGPS-RILAPLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEIKTT  173 (174)
Q Consensus        99 ~~~~~~~~-~~lv~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~~~~  173 (174)
                      +++..+.+ ++.|.  +++++-.|-+++                .....+++..+..|+-||+.+|.||....+|.
T Consensus       534 DyfslDtdsFCTVL--EYceGNDLDFYL----------------KQhklmSEKEARSIiMQiVnAL~YLNEikpPI  591 (775)
T KOG1151|consen  534 DYFSLDTDSFCTVL--EYCEGNDLDFYL----------------KQHKLMSEKEARSIIMQIVNALKYLNEIKPPI  591 (775)
T ss_pred             eeeeeccccceeee--eecCCCchhHHH----------------HhhhhhhHHHHHHHHHHHHHHHHHHhccCCCe
Confidence            99976644 33344  444444433322                23345889999999999999999998876663

>smart00221 STYKc Protein kinase; unclassified specificity

Probab=99.20  E-value=1.8e-10  Score=79.96  Aligned_cols=115  Identities=31%  Similarity=0.407  Sum_probs=90.6

Q ss_pred             eeecceecccCCeeEEEEEEc-CCCEEEEEEeeccCcc-chhHHHHHHHHHhcccccCCCeeeeecceecCCCcccchhh
Q 039630           36 FRTSNKIGEGGFGSVYKGRLE-DGTVVAVNVLSVESKQ-GETEFMSEVASMANINICHENLVKLHGGCIDGPSRILAPLQ  113 (174)
Q Consensus        36 ~~~~~~lg~G~~g~V~~~~~~-~~~~~avK~~~~~~~~-~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~~~~~~~lv~~~  113 (174)
                      |...+.||+|++|.||++... ++..+++|.+...... ....+.+|+..+..++  |+|++++.+.+...+..++++  
T Consensus         1 ~~~~~~i~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~~~~~~--~~~i~~~~~~~~~~~~~~~v~--   76 (225)
T smart00221        1 YELGKKLGEGAFGKVYLARDKGTGELVAVKVLKKEKTEKQREEFLREIRILKKLK--HPNIVKLYGVFEDPEPLYLVM--   76 (225)
T ss_pred             CceeeEeecCCCeEEEEEEEcCCCcEEEEEeeccccchHHHHHHHHHHHHHHhCC--CCChhhheeeeecCCceEEEE--
Confidence            345688999999999999954 4889999999866444 5678889999999998  999999999998888777777  


Q ss_pred             hhhhhhhhhhhhhcccceeeeeeecCCCCCccc-CCHHHHHHHHHHHHHHHHHhhhcc
Q 039630          114 ASIEALFLFTKLWKMDKFISIYVVSGSKKNRVK-FNWIARREIALGIARGLAYIHEEI  170 (174)
Q Consensus       114 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~qi~~gl~yLH~~~  170 (174)
                      ++...+.+...+.                .... +++.....++.+++.++.+||++.
T Consensus        77 e~~~~~~L~~~~~----------------~~~~~~~~~~~~~~~~~l~~~l~~lh~~~  118 (225)
T smart00221       77 EYCEGGDLFDYLR----------------KKGGKLSEEEARFYLRQILEALEYLHSLG  118 (225)
T ss_pred             eccCCCCHHHHHH----------------hcccCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            6655555544221                1112 678888999999999999999863

Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase.

>KOG0604 consensus MAP kinase-activated protein kinase 2 [Signal transduction mechanisms]

Probab=99.20  E-value=1.7e-11  Score=86.85  Aligned_cols=117  Identities=19%  Similarity=0.169  Sum_probs=90.1

Q ss_pred             cCCeee-cceecccCCeeEEEEE-EcCCCEEEEEEeeccCccchhHHHHHHHHHhcccccCCCeeeeecceecC--CCcc
Q 039630           33 TNGFRT-SNKIGEGGFGSVYKGR-LEDGTVVAVNVLSVESKQGETEFMSEVASMANINICHENLVKLHGGCIDG--PSRI  108 (174)
Q Consensus        33 ~~~~~~-~~~lg~G~~g~V~~~~-~~~~~~~avK~~~~~~~~~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~~~--~~~~  108 (174)
                      +.+|.+ ..+||-|-.|+|..|. .++++.+|+|++..     .....+|+++....+ .|+||+.+++++...  +..+
T Consensus        60 tedY~is~qvLG~GinGkV~~C~~k~T~ekfALKvL~D-----s~KARrEVeLHw~~s-~h~~iV~IidVyeNs~~~rkc  133 (400)
T KOG0604|consen   60 TEDYSISWQVLGAGINGKVVQCVHKRTQEKFALKVLLD-----SPKARREVELHWMAS-GHPHIVSIIDVYENSYQGRKC  133 (400)
T ss_pred             hhhheehhhhhccccCCceEEEEeccchhhhHHHHHhc-----CHHHHhHhhhhhhhc-CCCceEEeehhhhhhccCcee
Confidence            345554 4789999999999999 77899999999853     335578888887776 799999999998654  3334


Q ss_pred             cchhhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhc
Q 039630          109 LAPLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEE  169 (174)
Q Consensus       109 lv~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~  169 (174)
                      ++..++.++++.|+......              ....+.+..+..|+.||+.|+.|||+.
T Consensus       134 LLiVmE~meGGeLfsriq~~--------------g~~afTErea~eI~~qI~~Av~~lH~~  180 (400)
T KOG0604|consen  134 LLIVMECMEGGELFSRIQDR--------------GDQAFTEREASEIMKQIGLAVRYLHSM  180 (400)
T ss_pred             eEeeeecccchHHHHHHHHc--------------ccccchHHHHHHHHHHHHHHHHHHHhc
Confidence            44445888888888755332              223588999999999999999999973

>KOG4645 consensus MAPKKK (MAP kinase kinase kinase) SSK2 and related serine/threonine protein kinases [Signal transduction mechanisms]

Probab=99.19  E-value=2e-11  Score=100.17  Aligned_cols=115  Identities=24%  Similarity=0.428  Sum_probs=89.4

Q ss_pred             eeecceecccCCeeEEEEE-EcCCCEEEEEEeeccC--ccchhHHHHHHHHHhcccccCCCeeeeecceecCCCcccchh
Q 039630           36 FRTSNKIGEGGFGSVYKGR-LEDGTVVAVNVLSVES--KQGETEFMSEVASMANINICHENLVKLHGGCIDGPSRILAPL  112 (174)
Q Consensus        36 ~~~~~~lg~G~~g~V~~~~-~~~~~~~avK~~~~~~--~~~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~~~~~~~lv~~  112 (174)
                      ......||.|.||+||.|. ..+|...|+|.++...  ......+..|..++..+.  |||+++++|+-...+.      
T Consensus      1237 Wqrg~~Ig~G~fG~VYtavN~~tGellAvKEI~iq~~~~k~~~~i~eEm~vlE~ln--HpNlV~YyGVEvHRek------ 1308 (1509)
T KOG4645|consen 1237 WQRGNFIGGGTFGKVYTAVNLDTGELLAVKEIKIQDSDHKTFKLIAEEMKVLEGLN--HPNLVRYYGVEVHREK------ 1308 (1509)
T ss_pred             eccccccCCcceeeeEEeecCCccchhhhhhhhcCccccccCcchHHHHHHHHhcc--CccccccCceeecHHH------
Confidence            4556799999999999999 8889999999997653  344566889999999999  9999999999877654      


Q ss_pred             hhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhcc
Q 039630          113 QASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEI  170 (174)
Q Consensus       113 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  170 (174)
                            ..+++++|.++++.++.      ...+..++.....+..|++.|++|||.+.
T Consensus      1309 ------v~IFMEyC~~GsLa~ll------~~gri~dE~vt~vyt~qll~gla~LH~~g 1354 (1509)
T KOG4645|consen 1309 ------VYIFMEYCEGGSLASLL------EHGRIEDEMVTRVYTKQLLEGLAYLHEHG 1354 (1509)
T ss_pred             ------HHHHHHHhccCcHHHHH------HhcchhhhhHHHHHHHHHHHHHHHHHhcC
Confidence                  44555566555554432      22234577788889999999999999764

>KOG0669 consensus Cyclin T-dependent kinase CDK9 [Cell cycle control, cell division, chromosome partitioning]

Probab=99.19  E-value=3.6e-13  Score=93.27  Aligned_cols=128  Identities=23%  Similarity=0.382  Sum_probs=91.6

Q ss_pred             HhhcCCeeecceecccCCeeEEEEE-EcCCCEEEEEEeeccC--ccchhHHHHHHHHHhcccccCCCeeeeecceecCCC
Q 039630           30 KIATNGFRTSNKIGEGGFGSVYKGR-LEDGTVVAVNVLSVES--KQGETEFMSEVASMANINICHENLVKLHGGCIDGPS  106 (174)
Q Consensus        30 ~~~~~~~~~~~~lg~G~~g~V~~~~-~~~~~~~avK~~~~~~--~~~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~~~~~  106 (174)
                      ....+.|+...++|+|.||.||+++ ..+|+.||+|.+--.+  ........+|+.+|..+.  |+|++.++..|.+...
T Consensus        13 ~~~~~~yek~~kigqGtfgeVFkAr~~n~~kkvalkkvlmeneKeGfpitalreikiL~~lk--Henv~nliEic~tk~T   90 (376)
T KOG0669|consen   13 CDEVSKYEKLAKIGQGTFGEVFKARSKNTGKKVALKKVLMENEKEGFPITALREIKILQLLK--HENVVNLIEICRTKAT   90 (376)
T ss_pred             eecchHHHHHHhcCCchHHHHHHHhhcCccchhHHHHHHHhccccCCcHHHHHHHHHHHHhc--chhHHHHHHHHhhccC
Confidence            3344567777899999999999999 6778888888764332  223456789999999999  9999999998876543


Q ss_pred             cccchhhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhc
Q 039630          107 RILAPLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEE  169 (174)
Q Consensus       107 ~~lv~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~  169 (174)
                      ...    .......+++.+|..+.++.+      .....+++...+..++.++..||.|+|++
T Consensus        91 p~~----r~r~t~ylVf~~cehDLaGlL------sn~~vr~sls~Ikk~Mk~Lm~GL~~iHr~  143 (376)
T KOG0669|consen   91 PTN----RDRATFYLVFDFCEHDLAGLL------SNRKVRFSLSEIKKVMKGLMNGLYYIHRN  143 (376)
T ss_pred             Ccc----cccceeeeeHHHhhhhHHHHh------cCccccccHHHHHHHHHHHHHHHHHHHHh
Confidence            222    122234455555554444332      23345788899999999999999999874

>KOG1006 consensus Mitogen-activated protein kinase (MAPK) kinase MKK4 [Signal transduction mechanisms]

Probab=99.18  E-value=2.3e-12  Score=89.87  Aligned_cols=125  Identities=17%  Similarity=0.261  Sum_probs=91.1

Q ss_pred             CCeeecceecccCCeeEEEEE-EcCCCEEEEEEeeccC-ccchhHHHHHHHHHhcccccCCCeeeeecceecCCCcccch
Q 039630           34 NGFRTSNKIGEGGFGSVYKGR-LEDGTVVAVNVLSVES-KQGETEFMSEVASMANINICHENLVKLHGGCIDGPSRILAP  111 (174)
Q Consensus        34 ~~~~~~~~lg~G~~g~V~~~~-~~~~~~~avK~~~~~~-~~~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~~~~~~~lv~  111 (174)
                      .+++-+..||.|+||.|++.. .+.|+.+|||.+.... ..+..+++.|.+...+.+ ..|||++++|+...++..++.|
T Consensus        64 ~~Lqdlg~iG~G~fG~V~KM~hk~sg~~mAVKrIr~~n~~keq~rll~e~d~~mks~-~cp~IVkfyGa~F~EGdcWiCM  142 (361)
T KOG1006|consen   64 DNLQDLGEIGNGAFGTVNKMLHKPSGKLMAVKRIRSNNIEKEQKRLLMEHDTVMKSS-NCPNIVKFYGALFSEGDCWICM  142 (361)
T ss_pred             chHHHHHHhcCCcchhhhhhhcCccCcEEEEEEeeeccchHHHHHHHHHHHHHHhhc-CCcHHHHHhhhhhcCCceeeeH
Confidence            456667899999999999988 7789999999998664 356778899998655544 3799999999999999988877


Q ss_pred             hhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHh-------hhccCCC
Q 039630          112 LQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYI-------HEEIKTT  173 (174)
Q Consensus       112 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yL-------H~~~~~~  173 (174)
                        |.++...-..+.          ...  ......+++..+..++...+.||+||       |+.+||+
T Consensus       143 --ELMd~SlDklYk----------~vy--~vq~~~ipE~Ilg~ItvatV~AL~yLK~~lkiIHRDvKPS  197 (361)
T KOG1006|consen  143 --ELMDISLDKLYK----------RVY--SVQKSRIPENILGHITVATVDALDYLKEELKIIHRDVKPS  197 (361)
T ss_pred             --HHHhhhHHHHHH----------HHH--HHHhccCcHhhhhheeeeehhHHHHHHHHhhhhhccCChh
Confidence              433222211110          111  11233578888888998899999998       6666664

>KOG0671 consensus LAMMER dual specificity kinases [Signal transduction mechanisms]

Probab=99.17  E-value=1.7e-11  Score=89.13  Aligned_cols=119  Identities=18%  Similarity=0.251  Sum_probs=86.8

Q ss_pred             cCCeeecceecccCCeeEEEEE-EcCCCEEEEEEeeccCccchhHHHHHHHHHhcccccCCC----eeeeecceecCCCc
Q 039630           33 TNGFRTSNKIGEGGFGSVYKGR-LEDGTVVAVNVLSVESKQGETEFMSEVASMANINICHEN----LVKLHGGCIDGPSR  107 (174)
Q Consensus        33 ~~~~~~~~~lg~G~~g~V~~~~-~~~~~~~avK~~~~~~~~~~~~~~~e~~~l~~l~~~h~~----i~~~~~~~~~~~~~  107 (174)
                      .+.|.+...+|+|.||+|..|. ..++..||+|+++.- ....+...-|+.++.++....|+    ++.+.++|.-.++.
T Consensus        88 ~~Ry~i~~~lGeGtFGkV~ec~D~~~~~~vAlKIik~V-~kYreAa~iEi~vLqki~~~DP~g~~rcv~m~~wFdyrghi  166 (415)
T KOG0671|consen   88 TNRYEIVDLLGEGTFGKVVECWDRETKEHVALKIIKNV-DKYREAALIEIEVLQKINESDPNGKFRCVQMRDWFDYRGHI  166 (415)
T ss_pred             ccceehhhhhcCCcccceEEEeecCCCceehHHHHHHH-HHHhhHHHHHHHHHHHHHhcCCCCceEEEeeehhhhccCce
Confidence            5679999999999999999998 445789999999733 45566778899999988412233    67777888777776


Q ss_pred             ccchhhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhc
Q 039630          108 ILAPLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEE  169 (174)
Q Consensus       108 ~lv~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~  169 (174)
                      ++|+  +..+          .+.++.+.     .++..+++...+..+++|++++++|||+.
T Consensus       167 Civf--ellG----------~S~~dFlk-----~N~y~~fpi~~ir~m~~QL~~sv~fLh~~  211 (415)
T KOG0671|consen  167 CIVF--ELLG----------LSTFDFLK-----ENNYIPFPIDHIRHMGYQLLESVAFLHDL  211 (415)
T ss_pred             EEEE--eccC----------hhHHHHhc-----cCCccccchHHHHHHHHHHHHHHHHHHhc
Confidence            6666  3222          11111111     23445689999999999999999999985

>KOG0983 consensus Mitogen-activated protein kinase (MAPK) kinase MKK7/JNKK2 [Signal transduction mechanisms]

Probab=99.16  E-value=2.4e-10  Score=80.27  Aligned_cols=121  Identities=18%  Similarity=0.280  Sum_probs=90.5

Q ss_pred             CCeeecceecccCCeeEEEEE-EcCCCEEEEEEeecc-CccchhHHHHHHHHHhcccccCCCeeeeecceecCCCcccch
Q 039630           34 NGFRTSNKIGEGGFGSVYKGR-LEDGTVVAVNVLSVE-SKQGETEFMSEVASMANINICHENLVKLHGGCIDGPSRILAP  111 (174)
Q Consensus        34 ~~~~~~~~lg~G~~g~V~~~~-~~~~~~~avK~~~~~-~~~~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~~~~~~~lv~  111 (174)
                      ++++.+..||.|+.|.|++++ .++|..+|||.+... +.+...++++.+.++-... ..|.|++.+|+|....+.++.|
T Consensus        92 ndl~~l~dlGsGtcG~V~k~~~rs~~~iiAVK~M~rt~Nkee~kRILmDldvv~~s~-dcpyIV~c~GyFi~n~dV~IcM  170 (391)
T KOG0983|consen   92 NDLENLGDLGSGTCGQVWKMRFRSTGHIIAVKQMRRTGNKEENKRILMDLDVVLKSH-DCPYIVQCFGYFITNTDVFICM  170 (391)
T ss_pred             HHhhhHHhhcCCCccceEEEEEcccceEEEEEeecccCCHHHHHHHHHhhhHHhhcc-CCCeeeeeeeEEeeCchHHHHH
Confidence            345667889999999999999 677999999999866 4455677888888765543 3799999999999998877776


Q ss_pred             hhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHh-------hhccCCC
Q 039630          112 LQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYI-------HEEIKTT  173 (174)
Q Consensus       112 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yL-------H~~~~~~  173 (174)
                      +......--|..                  .-..++++..+-.+...+..||.||       |+.+||+
T Consensus       171 elMs~C~ekLlk------------------rik~piPE~ilGk~tva~v~AL~YLKeKH~viHRDvKPS  221 (391)
T KOG0983|consen  171 ELMSTCAEKLLK------------------RIKGPIPERILGKMTVAIVKALYYLKEKHGVIHRDVKPS  221 (391)
T ss_pred             HHHHHHHHHHHH------------------HhcCCchHHhhhhhHHHHHHHHHHHHHhcceeecccCcc
Confidence            322222211221                  1234588999999999999999999       5566654

>KOG0696 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.14  E-value=9.4e-12  Score=91.79  Aligned_cols=122  Identities=20%  Similarity=0.179  Sum_probs=94.1

Q ss_pred             HhhcCCeeecceecccCCeeEEEEE-EcCCCEEEEEEeecc---CccchhHHHHHHHHHhcccccCCCeeeeecceecCC
Q 039630           30 KIATNGFRTSNKIGEGGFGSVYKGR-LEDGTVVAVNVLSVE---SKQGETEFMSEVASMANINICHENLVKLHGGCIDGP  105 (174)
Q Consensus        30 ~~~~~~~~~~~~lg~G~~g~V~~~~-~~~~~~~avK~~~~~---~~~~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~~~~  105 (174)
                      .+...+|..+.+||.|+||+|..++ ..+...+|+|++++.   ..++.+.-..|-.+|.-.. ..|.+++++.+|.+.+
T Consensus       345 ~i~~tDFnFl~VlGKGSFGKVlLaerkgtdELyAiKiLkKDViiQdDDvectm~EKrvLAL~~-kppFL~qlHScFQTmD  423 (683)
T KOG0696|consen  345 RIKATDFNFLMVLGKGSFGKVLLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPG-KPPFLVQLHSCFQTMD  423 (683)
T ss_pred             ceeecccceEEEeccCccceeeeecccCcchhhhhhhhccceeeecCcccceehhhhheecCC-CCchHHHHHHHhhhhh
Confidence            4555678889999999999999999 456789999999866   1233444445555665443 3688999999999999


Q ss_pred             CcccchhhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhcc
Q 039630          106 SRILAPLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEI  170 (174)
Q Consensus       106 ~~~lv~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  170 (174)
                      .++.||  ++..++.|.-....                -..+.++.+..+|..||-||-+||++.
T Consensus       424 RLyFVM--EyvnGGDLMyhiQQ----------------~GkFKEp~AvFYAaEiaigLFFLh~kg  470 (683)
T KOG0696|consen  424 RLYFVM--EYVNGGDLMYHIQQ----------------VGKFKEPVAVFYAAEIAIGLFFLHSKG  470 (683)
T ss_pred             heeeEE--EEecCchhhhHHHH----------------hcccCCchhhhhhHHHHHHhhhhhcCC
Confidence            999998  88888887654422                234778888899999999999999864

>cd05147 RIO1_euk RIO kinase family; eukaryotic RIO1, catalytic domain

Probab=99.13  E-value=2.3e-10  Score=78.06  Aligned_cols=109  Identities=14%  Similarity=0.063  Sum_probs=69.5

Q ss_pred             cceecccCCeeEEEEEEcCCCEEEEEEeeccCcc--c-------h-----------------hHHHHHHHHHhcccccCC
Q 039630           39 SNKIGEGGFGSVYKGRLEDGTVVAVNVLSVESKQ--G-------E-----------------TEFMSEVASMANINICHE   92 (174)
Q Consensus        39 ~~~lg~G~~g~V~~~~~~~~~~~avK~~~~~~~~--~-------~-----------------~~~~~e~~~l~~l~~~h~   92 (174)
                      ...||+|+||.||.|..++|+.||+|+++.....  .       .                 .....|+.++..+.  ++
T Consensus         2 ~~~ig~G~~~~Vy~a~~~~g~~vAvKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~--~~   79 (190)
T cd05147           2 NGCISTGKEANVYHATTANGEERAIKIYKTSILVFKDRDRYVSGEFRFRHGYCKSNPRKMVRTWAEKEMRNLKRLV--TA   79 (190)
T ss_pred             CCccccccceEEEEEECCCCCEEEEEEEEecccccccHHHhhcCCchhhccccCCCHHHHHHHHHHHHHHHHHHHH--HC
Confidence            3689999999999999668999999999754211  1       0                 12234888888887  66


Q ss_pred             CeeeeecceecCCCcccchhhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHh-hhc
Q 039630           93 NLVKLHGGCIDGPSRILAPLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYI-HEE  169 (174)
Q Consensus        93 ~i~~~~~~~~~~~~~~lv~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yL-H~~  169 (174)
                      ++....... . ...++++  ++.++..+....                .....++...+..++.|++.+|.|+ |+.
T Consensus        80 ~v~~p~~~~-~-~~~~iVm--E~i~g~~l~~~~----------------~~~~~~~~~~~~~i~~qi~~~L~~l~H~~  137 (190)
T cd05147          80 GIPCPEPIL-L-KSHVLVM--EFIGDDGWAAPR----------------LKDAPLSESKARELYLQVIQIMRILYQDC  137 (190)
T ss_pred             CCCCCcEEE-e-cCCEEEE--EEeCCCCCcchh----------------hhcCCCCHHHHHHHHHHHHHHHHHHHHhC
Confidence            653322211 1 1224555  444433221110                1123477888899999999999999 554

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. This subfamily is composed of RIO1 proteins from eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle progression and c

>PLN03224 probable serine/threonine protein kinase; Provisional

Probab=99.12  E-value=3.3e-10  Score=87.68  Aligned_cols=135  Identities=16%  Similarity=0.160  Sum_probs=81.9

Q ss_pred             hcCCeeecceecccCCeeEEEEEE-----------------cCCCEEEEEEeeccCccchhH--------------HHHH
Q 039630           32 ATNGFRTSNKIGEGGFGSVYKGRL-----------------EDGTVVAVNVLSVESKQGETE--------------FMSE   80 (174)
Q Consensus        32 ~~~~~~~~~~lg~G~~g~V~~~~~-----------------~~~~~~avK~~~~~~~~~~~~--------------~~~e   80 (174)
                      ..++|.+.++||+|+||.||+|..                 ..++.||||.+..........              ...|
T Consensus       143 ~~d~F~i~~~LG~GgFG~VYkG~~~~~~~~~v~~~~~~~~~~~~r~VAVK~l~~~~~~~~~~fl~e~~~~~~~~e~~~vE  222 (507)
T PLN03224        143 SSDDFQLRDKLGGGNFGITFEGLRLQADDQGVTQRSKLTAEQKKRRVVLKRVNMDRQGVRQDFLKTGTLAKGSAETGMVE  222 (507)
T ss_pred             cccCceEeeEeecCCCeEEEEEEecccccchhhhhccccccccCceEEEEEecccchhhHHHHHhhhhhhhcccchhHHH
Confidence            456899999999999999999863                 234679999987543222222              3345


Q ss_pred             HHHHhcccccCCCe-----eeeecceec--------CCCcccchhhhhhhhhhhhhhhhccc-ce----eeeeeecC---
Q 039630           81 VASMANINICHENL-----VKLHGGCID--------GPSRILAPLQASIEALFLFTKLWKMD-KF----ISIYVVSG---  139 (174)
Q Consensus        81 ~~~l~~l~~~h~~i-----~~~~~~~~~--------~~~~~lv~~~~~~~~~~l~~~~~~~~-~~----~~~~~~~~---  139 (174)
                      +.++.+++  |.++     +++.++|..        .+..++|+  ++.+++.+...+-... ..    .++.....   
T Consensus       223 ~~~l~~l~--~~~l~~~~~~~~lg~~~~~~~~g~~~~~~~~LV~--Ey~~~gsL~~~L~~~~~~~~~~L~e~l~~g~~l~  298 (507)
T PLN03224        223 AYMCAKIK--RNPIAAASCAEYLGYFTSNTADGAFTKGSQWLVW--KFESDATLGDALDGKLGPFPGCLEEFMMAGKKIP  298 (507)
T ss_pred             HHHHHHhh--cccchhhhhhhhhhhcccccccccccCCceEEEE--EcCCCCcHHHHHhhccCCCcchHHHHHhcCCchh
Confidence            66666665  5443     556666543        34567888  6666666655432110 00    00000000   


Q ss_pred             CCCCcccCCHHHHHHHHHHHHHHHHHhhhcc
Q 039630          140 SKKNRVKFNWIARREIALGIARGLAYIHEEI  170 (174)
Q Consensus       140 ~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  170 (174)
                      .......+++..+..++.|++.||.|||++.
T Consensus       299 ~~~~~~~~~~~~~~~i~~ql~~aL~~lH~~~  329 (507)
T PLN03224        299 DNMPQDKRDINVIKGVMRQVLTGLRKLHRIG  329 (507)
T ss_pred             hhcccccCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            0011223567888899999999999999863

>KOG1345 consensus Serine/threonine kinase [Signal transduction mechanisms]

Probab=99.11  E-value=6.6e-11  Score=82.97  Aligned_cols=133  Identities=13%  Similarity=0.215  Sum_probs=95.0

Q ss_pred             cCcccceechhhHHhh--cCCeeecceecccCCeeEEEEE-EcCCCEEEEEEeeccCccchhHHHHHHHHHhcccccCCC
Q 039630           17 QGYKFSKISYNELKIA--TNGFRTSNKIGEGGFGSVYKGR-LEDGTVVAVNVLSVESKQGETEFMSEVASMANINICHEN   93 (174)
Q Consensus        17 ~~~~~~~~~~~~~~~~--~~~~~~~~~lg~G~~g~V~~~~-~~~~~~~avK~~~~~~~~~~~~~~~e~~~l~~l~~~h~~   93 (174)
                      .++++..++-.++...  .+.|.+.+.+|+|.||++..++ .+..+.+++|.++.. ....++|.+|..---.++ .|.|
T Consensus         5 ~~g~ih~I~~~el~kv~l~d~y~I~k~lgeG~FgkIlL~eHr~s~t~ivlKavp~p-~tt~~dF~rEfhY~~~Ls-~H~h   82 (378)
T KOG1345|consen    5 DGGQIHLIPMEELKKVDLEDVYTINKQLGEGRFGKILLAEHRQSKTRIVLKAVPRP-QTTQADFVREFHYSFFLS-PHQH   82 (378)
T ss_pred             CCCcccccccccccccchhhhhhHHHHhcccceeeEEeeeccCCceEEEeeccCcc-hhhHHHHHHHhccceeec-cchh
Confidence            3455555555544332  2568888999999999999999 677889999999744 445667888876444454 5889


Q ss_pred             eeeeecceecCCCcccchhhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhc
Q 039630           94 LVKLHGGCIDGPSRILAPLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEE  169 (174)
Q Consensus        94 i~~~~~~~~~~~~~~lv~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~  169 (174)
                      |+.-++.-.+..+ +.|+.+++.+.+.|.....+                 .-+.+.....++.|++.|++|+|++
T Consensus        83 Ii~tY~vaFqt~d-~YvF~qE~aP~gdL~snv~~-----------------~GigE~~~K~v~~ql~SAi~fMHsk  140 (378)
T KOG1345|consen   83 IIDTYEVAFQTSD-AYVFVQEFAPRGDLRSNVEA-----------------AGIGEANTKKVFAQLLSAIEFMHSK  140 (378)
T ss_pred             hhHHHHHHhhcCc-eEEEeeccCccchhhhhcCc-----------------ccccHHHHHHHHHHHHHHHHHhhcc
Confidence            9988766555444 44555577777777663321                 1266777888999999999999985

>KOG0596 consensus Dual specificity; serine/threonine and tyrosine kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=99.11  E-value=9e-11  Score=89.14  Aligned_cols=122  Identities=15%  Similarity=0.138  Sum_probs=94.1

Q ss_pred             HhhcCCeeecceecccCCeeEEEEEEcCCCEEEEEEeecc--CccchhHHHHHHHHHhcccccCCCeeeeecceecCCCc
Q 039630           30 KIATNGFRTSNKIGEGGFGSVYKGRLEDGTVVAVNVLSVE--SKQGETEFMSEVASMANINICHENLVKLHGGCIDGPSR  107 (174)
Q Consensus        30 ~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~avK~~~~~--~~~~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~~~~~~  107 (174)
                      ......|++++.||+|+.++||++...+.+.+|+|.+...  +......+.+|+..|.+++ +|.+|++++++-..++.+
T Consensus       357 ~Vkg~~Yeilk~iG~GGSSkV~kV~~s~~~iyalkkv~~~~~D~qtl~gy~nEI~lL~KLk-g~~~IIqL~DYEv~d~~l  435 (677)
T KOG0596|consen  357 KVKGREYEILKQIGSGGSSKVFKVLNSDKQIYALKKVVLLEADNQTLDGYRNEIALLNKLK-GHDKIIQLYDYEVTDGYL  435 (677)
T ss_pred             EECcchhhHHHhhcCCCcceeeeeecCCCcchhhhHHHHhhcCHHHHHHHHHHHHHHHHhc-CCceEEEEeeeeccCceE
Confidence            3444569999999999999999999777777777777544  3455778999999999998 899999999999999999


Q ss_pred             ccchhhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhcc
Q 039630          108 ILAPLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEI  170 (174)
Q Consensus       108 ~lv~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  170 (174)
                      |+|+++...+...++...                  ....+-..+..+..|++.++.++|.+.
T Consensus       436 YmvmE~Gd~DL~kiL~k~------------------~~~~~~~~lk~ywkqML~aV~~IH~~g  480 (677)
T KOG0596|consen  436 YMVMECGDIDLNKILKKK------------------KSIDPDWFLKFYWKQMLLAVKTIHQHG  480 (677)
T ss_pred             EEEeecccccHHHHHHhc------------------cCCCchHHHHHHHHHHHHHHHHHHHhc
Confidence            999965555444444321                  122332366778999999999998753

>KOG0664 consensus Nemo-like MAPK-related serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.09  E-value=8.5e-11  Score=82.63  Aligned_cols=118  Identities=19%  Similarity=0.290  Sum_probs=88.0

Q ss_pred             CeeecceecccCCeeEEEEE-EcCCCEEEEEEeecc--CccchhHHHHHHHHHhcccccCCCeeeeecceecCCCcccch
Q 039630           35 GFRTSNKIGEGGFGSVYKGR-LEDGTVVAVNVLSVE--SKQGETEFMSEVASMANINICHENLVKLHGGCIDGPSRILAP  111 (174)
Q Consensus        35 ~~~~~~~lg~G~~g~V~~~~-~~~~~~~avK~~~~~--~~~~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~~~~~~~lv~  111 (174)
                      +.+.-+.||-|+||.||..+ -++|+.|++|.+..-  +.-..+.+.+|+.+|.-.+  |.|++..++.......     
T Consensus        54 Di~PDRPIGYGAFGVVWsVTDPRdgrrvalkK~pnvfq~L~s~krvFre~kmLcfFk--HdNVLSaLDILQPph~-----  126 (449)
T KOG0664|consen   54 DIQPDRPIGYGAFGVVWSVTDPRSGKRVALKKMPNVFQNLASCKRVFREIKMLSSFR--HDNVLSLLDILQPANP-----  126 (449)
T ss_pred             cCCCCCcccccceeEEEeccCCCCccchhHhhcchHHHHHHHHHHHHHHHHHHHhhc--cccHHHHHHhcCCCCc-----
Confidence            35566899999999999988 567999999988633  2334667899999999999  9999999988765433     


Q ss_pred             hhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhh
Q 039630          112 LQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHE  168 (174)
Q Consensus       112 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~  168 (174)
                        .+..-.+.+.+++..+.-..       ...-..++...+..+.+||++||.|||+
T Consensus       127 --dfFqEiYV~TELmQSDLHKI-------IVSPQ~Ls~DHvKVFlYQILRGLKYLHs  174 (449)
T KOG0664|consen  127 --SFFQELYVLTELMQSDLHKI-------IVSPQALTPDHVKVFVYQILRGLKYLHT  174 (449)
T ss_pred             --hHHHHHHHHHHHHHhhhhhe-------eccCCCCCcchhhhhHHHHHhhhHHHhh
Confidence              55556666777665432221       1122356777888899999999999976

>cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins

Probab=99.09  E-value=5.8e-10  Score=78.55  Aligned_cols=101  Identities=19%  Similarity=0.110  Sum_probs=76.8

Q ss_pred             cCCeeEEEEE-EcCCCEEEEEEeeccCccchhHHHHHHHHHhcccccCCCeeeeecceecCCCcccchhhhhhhhhhhhh
Q 039630           45 GGFGSVYKGR-LEDGTVVAVNVLSVESKQGETEFMSEVASMANINICHENLVKLHGGCIDGPSRILAPLQASIEALFLFT  123 (174)
Q Consensus        45 G~~g~V~~~~-~~~~~~~avK~~~~~~~~~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~~~~~~~lv~~~~~~~~~~l~~  123 (174)
                      |.++.||.+. ..+++.+|+|.++...     ....|...+....  |+|++++++.+...+..++++  ++.+++.+..
T Consensus         4 g~~~~v~~~~~~~~~~~~~~K~i~~~~-----~~~~~~~~~~~~~--~~~i~~~~~~~~~~~~~~lv~--e~~~~~~L~~   74 (237)
T cd05576           4 GVIDKVLLVMDTRTQQTFILKGLRKSS-----EYSRERLTIIPHC--VPNMVCLHKYIVSEDSVFLVL--QHAEGGKLWS   74 (237)
T ss_pred             cccceEEEEEEccCCcEEEEEeecchh-----hhhhHHHHHHhcC--CCceeehhhheecCCeEEEEE--ecCCCCCHHH
Confidence            7899999998 6678999999997542     1223344444445  999999999999888888888  7777777655


Q ss_pred             hhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhcc
Q 039630          124 KLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEI  170 (174)
Q Consensus       124 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  170 (174)
                      .+..                ...+++..+..++.|++.||+|||++.
T Consensus        75 ~l~~----------------~~~l~~~~~~~~~~ql~~~l~~lH~~~  105 (237)
T cd05576          75 HISK----------------FLNIPEECVKRWAAEMVVALDALHREG  105 (237)
T ss_pred             HHHH----------------hcCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            4321                123788889999999999999999854

Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha

>cd00180 PKc Catalytic domain of Protein Kinases

Probab=99.09  E-value=1.7e-09  Score=73.88  Aligned_cols=110  Identities=33%  Similarity=0.411  Sum_probs=86.0

Q ss_pred             ecccCCeeEEEEEEc-CCCEEEEEEeeccCcc-chhHHHHHHHHHhcccccCCCeeeeecceecCCCcccchhhhhhhhh
Q 039630           42 IGEGGFGSVYKGRLE-DGTVVAVNVLSVESKQ-GETEFMSEVASMANINICHENLVKLHGGCIDGPSRILAPLQASIEAL  119 (174)
Q Consensus        42 lg~G~~g~V~~~~~~-~~~~~avK~~~~~~~~-~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~~~~~~~lv~~~~~~~~~  119 (174)
                      ||+|.+|.||++... ++..+++|++...... ....+.+|+..++.+.  |++++++++.+...+..++++  ++..+.
T Consensus         1 l~~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~e~~~~~~l~--~~~i~~~~~~~~~~~~~~~~~--e~~~~~   76 (215)
T cd00180           1 LGEGGFGTVYLARDKKTGKKVAIKIIKKEDSSSLLEELLREIEILKKLN--HPNIVKLYGVFEDENHLYLVM--EYCEGG   76 (215)
T ss_pred             CCcCCceEEEEEEecCCCcEEEEEEeccccchhHHHHHHHHHHHHHhcC--CCCeeeEeeeeecCCeEEEEE--ecCCCC
Confidence            689999999999954 4889999999755332 3467899999999999  999999999999888888887  665555


Q ss_pred             hhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhcc
Q 039630          120 FLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEI  170 (174)
Q Consensus       120 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  170 (174)
                      .+...+..               ....+++..+..++.+++.++++||+..
T Consensus        77 ~l~~~~~~---------------~~~~~~~~~~~~~~~~l~~~l~~lh~~~  112 (215)
T cd00180          77 SLKDLLKE---------------NEGKLSEDEILRILLQILEGLEYLHSNG  112 (215)
T ss_pred             cHHHHHHh---------------ccCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            55442211               0024688889999999999999999863

Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which

>KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms]

Probab=99.07  E-value=2.4e-11  Score=85.36  Aligned_cols=118  Identities=22%  Similarity=0.412  Sum_probs=91.9

Q ss_pred             CeeecceecccCCeeEEEEEEcCCCEEEEEEeecc--CccchhHHHHHHHHHhcccccCCCeeeeecceecCCCcccchh
Q 039630           35 GFRTSNKIGEGGFGSVYKGRLEDGTVVAVNVLSVE--SKQGETEFMSEVASMANINICHENLVKLHGGCIDGPSRILAPL  112 (174)
Q Consensus        35 ~~~~~~~lg~G~~g~V~~~~~~~~~~~avK~~~~~--~~~~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~~~~~~~lv~~  112 (174)
                      ++..+.+|.+...|..|+|+|+ |..+++|++...  +.....+|..|...|+-.+  ||||+.++|.|.+++++.++. 
T Consensus       191 ~lnl~tkl~e~hsgelwrgrwq-gndivakil~vr~~t~risrdfneefp~lrifs--hpnilpvlgacnsppnlv~is-  266 (448)
T KOG0195|consen  191 SLNLITKLAESHSGELWRGRWQ-GNDIVAKILNVREVTARISRDFNEEFPALRIFS--HPNILPVLGACNSPPNLVIIS-  266 (448)
T ss_pred             hhhhhhhhccCCCccccccccc-CcchhhhhhhhhhcchhhcchhhhhCcceeeec--CCchhhhhhhccCCCCceEee-
Confidence            3455678889999999999987 445677777654  4455667888988898888  999999999999998888887 


Q ss_pred             hhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhccC
Q 039630          113 QASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEIK  171 (174)
Q Consensus       113 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~~  171 (174)
                       .+++.+.++.-+-..              ...-++-.+..+++.++++||+|||+--+
T Consensus       267 -q~mp~gslynvlhe~--------------t~vvvd~sqav~faldiargmaflhslep  310 (448)
T KOG0195|consen  267 -QYMPFGSLYNVLHEQ--------------TSVVVDHSQAVRFALDIARGMAFLHSLEP  310 (448)
T ss_pred             -eeccchHHHHHHhcC--------------ccEEEecchHHHHHHHHHhhHHHHhhcch
Confidence             777888877643222              22335677888999999999999998543

>PRK10345 hypothetical protein; Provisional

Probab=99.04  E-value=1.4e-09  Score=75.26  Aligned_cols=112  Identities=12%  Similarity=0.136  Sum_probs=72.9

Q ss_pred             ecceecccCCeeEEEEEEcCCCEEEEEEeeccCccchhHHHHHHHHHhcccc---cCCCeeeeecceecCCC---cc-cc
Q 039630           38 TSNKIGEGGFGSVYKGRLEDGTVVAVNVLSVESKQGETEFMSEVASMANINI---CHENLVKLHGGCIDGPS---RI-LA  110 (174)
Q Consensus        38 ~~~~lg~G~~g~V~~~~~~~~~~~avK~~~~~~~~~~~~~~~e~~~l~~l~~---~h~~i~~~~~~~~~~~~---~~-lv  110 (174)
                      ....||+|+|+.||. ...+... ++|++..........+.+|+.+++.+.-   .||||++++|++.+...   .+ ++
T Consensus         6 ~~~~LG~G~~~~Vy~-hp~~~~k-~IKv~~~~~~~~~~~~~rEi~~l~~L~~~~~~h~nIvr~yg~~et~~g~g~v~~~I   83 (210)
T PRK10345          6 EQSPLGTGRHRKCYA-HPEDAQR-CIKIVYHRGDGGDKEIRRELKYYAHLSRRLIDWSGIPRYYGTVETDCGTGYVYDVI   83 (210)
T ss_pred             CcceecCCCceEEEE-CCCCcCe-EEEEEeccccchHHHHHHHHHHHHHhhccCCCCcccceeeEEEEeCCCCeEEEEEE
Confidence            347899999999996 3333444 6888876544456678999999999830   17999999999988742   12 34


Q ss_pred             hhhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHH-HHhhhcc
Q 039630          111 PLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGL-AYIHEEI  170 (174)
Q Consensus       111 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl-~yLH~~~  170 (174)
                      +++++...++|...+..                 ..+++.  ...+.|++.++ +|||++.
T Consensus        84 ~e~~G~~~~tL~~~l~~-----------------~~~~e~--~~~~~~~L~~l~~yLh~~~  125 (210)
T PRK10345         84 ADFDGKPSITLTEFAEQ-----------------CRYEED--VAQLRQLLKKLKRYLLDNR  125 (210)
T ss_pred             ecCCCCcchhHHHHHHc-----------------ccccHh--HHHHHHHHHHHHHHHHHCC
Confidence            42222334555443210                 123444  34577888777 8999864

>PHA02882 putative serine/threonine kinase; Provisional

Probab=99.03  E-value=3e-09  Score=77.35  Aligned_cols=117  Identities=21%  Similarity=0.239  Sum_probs=68.9

Q ss_pred             hcCCeeecceecccCCeeEEEEEEc-C---CCEEEEEEeeccCccchh-----------HHHHHHHHHhcccccCCCeee
Q 039630           32 ATNGFRTSNKIGEGGFGSVYKGRLE-D---GTVVAVNVLSVESKQGET-----------EFMSEVASMANINICHENLVK   96 (174)
Q Consensus        32 ~~~~~~~~~~lg~G~~g~V~~~~~~-~---~~~~avK~~~~~~~~~~~-----------~~~~e~~~l~~l~~~h~~i~~   96 (174)
                      ..+.|.+.+.||+|+||.||+|... +   +..+++|+..........           ....+...+..+.  |++++.
T Consensus        10 ~~~~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~~k~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~--h~~i~~   87 (294)
T PHA02882         10 TGKEWKIDKLIGCGGFGCVYETQCASDHCINNQAVAKIENLENETIVMETLVYNNIYDIDKIALWKNIHNID--HLGIPK   87 (294)
T ss_pred             CCCceEEeeEEecCCCceEEEEEEcCCcccccceEEEeccccCCchhhHHHHHHhhhhHHHHHHHHHhccCC--CCCCCc
Confidence            3467999999999999999999853 3   345666664433211110           1122223345566  999999


Q ss_pred             eecceecCCCc----ccchhhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhc
Q 039630           97 LHGGCIDGPSR----ILAPLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEE  169 (174)
Q Consensus        97 ~~~~~~~~~~~----~lv~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~  169 (174)
                      +++++......    ++++  +.... .+.. +               .......++..+..++.|++.||+|||++
T Consensus        88 ~~~~~~~~~~~~~~~~~~~--~~~~~-~~~~-~---------------~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  145 (294)
T PHA02882         88 YYGCGSFKRCRMYYRFILL--EKLVE-NTKE-I---------------FKRIKCKNKKLIKNIMKDMLTTLEYIHEH  145 (294)
T ss_pred             EEEeeeEecCCceEEEEEE--ehhcc-CHHH-H---------------HHhhccCCHHHHHHHHHHHHHHHHHHHhC
Confidence            99876554321    1222  11100 0000 0               00111246777889999999999999975

>KOG1024 consensus Receptor-like protein tyrosine kinase RYK/derailed [Signal transduction mechanisms]

Probab=99.02  E-value=1.9e-10  Score=84.39  Aligned_cols=132  Identities=20%  Similarity=0.247  Sum_probs=93.1

Q ss_pred             hHHhhcCCeeecceecccCCeeEEEEEEcC------CCEEEEEEeecc-CccchhHHHHHHHHHhcccccCCCeeeeecc
Q 039630           28 ELKIATNGFRTSNKIGEGGFGSVYKGRLED------GTVVAVNVLSVE-SKQGETEFMSEVASMANINICHENLVKLHGG  100 (174)
Q Consensus        28 ~~~~~~~~~~~~~~lg~G~~g~V~~~~~~~------~~~~avK~~~~~-~~~~~~~~~~e~~~l~~l~~~h~~i~~~~~~  100 (174)
                      ++.....+++....+-+|.||.||.|.|.+      .+.|-+|.++.. .+-....++.|...+..+.  |+|+..+.+.
T Consensus       278 ~l~v~r~Rv~l~~llqEGtFGri~~gI~~eEdt~n~~q~v~vKTvk~~AS~iQv~~~L~es~lly~~s--H~nll~V~~V  355 (563)
T KOG1024|consen  278 ELTVQRCRVRLSCLLQEGTFGRIYRGIWREEDTYNDCQEVLVKTVKQHASQIQVNLLLQESMLLYGAS--HPNLLSVLGV  355 (563)
T ss_pred             hhhhhhhheechhhhhcCchhheeeeeecccCCcchHHHHHHHHHHhcccHHHHHHHHHHHHHHhcCc--CCCccceeEE
Confidence            444455568888899999999999997643      345666766644 2334567889999999999  9999999998


Q ss_pred             eecC-CCcccchhhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhccC
Q 039630          101 CIDG-PSRILAPLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEIK  171 (174)
Q Consensus       101 ~~~~-~~~~lv~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~~  171 (174)
                      +... +.+++.+...+..++-.+...|.+.          .......+...++..++.|++.||+|||+...
T Consensus       356 ~ie~~~~P~V~y~~~~~gNLK~FL~~Cr~~----------~~~~aqtvtt~qlV~masQla~am~hlh~~~V  417 (563)
T KOG1024|consen  356 SIEDYATPFVLYPATGVGNLKSFLQICRGD----------DPSYAQTVTTIQLVLMASQLAMAMEHLHNHGV  417 (563)
T ss_pred             EeeccCcceEEEeccCcchHHHHHHHhccC----------CCccccchhHHHHHHHHHHHHHHHHHHHhcCc
Confidence            8654 5556666334444444444443322          23334467888999999999999999998653

>KOG0986 consensus G protein-coupled receptor kinase [Signal transduction mechanisms]

Probab=99.02  E-value=1.9e-10  Score=85.69  Aligned_cols=118  Identities=23%  Similarity=0.272  Sum_probs=91.6

Q ss_pred             CCeeecceecccCCeeEEEEE-EcCCCEEEEEEeeccC---ccchhHHHHHHHHHhcccccCCCeeeeecceecCCCccc
Q 039630           34 NGFRTSNKIGEGGFGSVYKGR-LEDGTVVAVNVLSVES---KQGETEFMSEVASMANINICHENLVKLHGGCIDGPSRIL  109 (174)
Q Consensus        34 ~~~~~~~~lg~G~~g~V~~~~-~~~~~~~avK~~~~~~---~~~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~~~~~~~l  109 (174)
                      +.|+.-++||+|+||.|+-|. ..+|+.+|.|.+.+..   .....-.+.|-.||..++  .+.||.+.-++.+.+.+++
T Consensus       185 n~F~~~RvlGkGGFGEV~acqvraTGKMYAcKkL~KKRiKkr~ge~maLnEk~iL~kV~--s~FiVslaYAfeTkd~LCl  262 (591)
T KOG0986|consen  185 NTFRVYRVLGKGGFGEVCACQVRATGKMYACKKLDKKRIKKRKGETMALNEKQILEKVS--SPFIVSLAYAFETKDALCL  262 (591)
T ss_pred             cceeeeEEEecccccceeEEEEecchhhHHHHHHHHHHHHHhhhhHHhhHHHHHHHHhc--cCcEEEEeeeecCCCceEE
Confidence            567888999999999999999 5679999999886442   222344678889999998  8999999999999998888


Q ss_pred             chhhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhc
Q 039630          110 APLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEE  169 (174)
Q Consensus       110 v~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~  169 (174)
                      |+  .-+.++.|-..+.         ..     ...-+++..++.++.+|+.||++||+.
T Consensus       263 VL--tlMNGGDLkfHiy---------n~-----g~~gF~e~ra~FYAAEi~cGLehlH~~  306 (591)
T KOG0986|consen  263 VL--TLMNGGDLKFHIY---------NH-----GNPGFDEQRARFYAAEIICGLEHLHRR  306 (591)
T ss_pred             EE--EeecCCceeEEee---------cc-----CCCCCchHHHHHHHHHHHhhHHHHHhc
Confidence            77  5555555544221         11     112488999999999999999999985

>cd05145 RIO1_like RIO kinase family; RIO1, RIO3 and similar proteins, catalytic domain

Probab=99.02  E-value=2.8e-09  Score=72.75  Aligned_cols=108  Identities=13%  Similarity=0.052  Sum_probs=71.1

Q ss_pred             cceecccCCeeEEEEEEcCCCEEEEEEeeccCccc--------------------------hhHHHHHHHHHhcccccCC
Q 039630           39 SNKIGEGGFGSVYKGRLEDGTVVAVNVLSVESKQG--------------------------ETEFMSEVASMANINICHE   92 (174)
Q Consensus        39 ~~~lg~G~~g~V~~~~~~~~~~~avK~~~~~~~~~--------------------------~~~~~~e~~~l~~l~~~h~   92 (174)
                      ...||+|++|.||+|...+|..||+|+++......                          ......|...+.++.  ++
T Consensus         2 ~~~ig~G~~~~Vy~a~~~~g~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~--~~   79 (190)
T cd05145           2 NGCISTGKEANVYHARTGDGEELAVKIYKTSTLSFKDRDKYIEGDPRFRSRYSKSNPRKLVFAWAEKEFRNLKRLY--EA   79 (190)
T ss_pred             CceeecCCCcEEEEEEcCCCCEEEEEEEEcCcceEeeHHHHhcCCcccccccccCCHHHHHHHHHHHHHHHHHHHH--hC
Confidence            46899999999999996689999999997552110                          112356788888887  77


Q ss_pred             CeeeeecceecCCCcccchhhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhh
Q 039630           93 NLVKLHGGCIDGPSRILAPLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHE  168 (174)
Q Consensus        93 ~i~~~~~~~~~~~~~~lv~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~  168 (174)
                      ++.........  ..++++  ++.++..+....                .....++......++.|++.++.++|+
T Consensus        80 ~i~~p~~~~~~--~~~lVm--E~~~g~~~~~~~----------------l~~~~~~~~~~~~i~~~l~~~l~~lH~  135 (190)
T cd05145          80 GVPVPEPILLK--KNVLVM--EFIGDDGSPAPR----------------LKDVPLEEEEAEELYEQVVEQMRRLYQ  135 (190)
T ss_pred             CCCCceEEEec--CCEEEE--EEecCCCchhhh----------------hhhccCCHHHHHHHHHHHHHHHHHHHH
Confidence            76443333222  234555  555443221111                011235677888999999999999998

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. In addition, RIO3 is present in multicellular eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle pro

>smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain

Probab=98.96  E-value=4.5e-09  Score=73.52  Aligned_cols=105  Identities=27%  Similarity=0.334  Sum_probs=82.3

Q ss_pred             CCeeEEEEEEc-CCCEEEEEEeeccCccc-hhHHHHHHHHHhcccccCCCeeeeecceecCCCcccchhhhhhhhhhhhh
Q 039630           46 GFGSVYKGRLE-DGTVVAVNVLSVESKQG-ETEFMSEVASMANINICHENLVKLHGGCIDGPSRILAPLQASIEALFLFT  123 (174)
Q Consensus        46 ~~g~V~~~~~~-~~~~~avK~~~~~~~~~-~~~~~~e~~~l~~l~~~h~~i~~~~~~~~~~~~~~lv~~~~~~~~~~l~~  123 (174)
                      +||.||++... ++..+++|++....... ...+..|+..++.++  |+|++++.+.+......++++  ++.+...+..
T Consensus         1 ~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~--~~~i~~~~~~~~~~~~~~l~~--e~~~~~~L~~   76 (244)
T smart00220        1 SFGKVYLARDKKTGKLVAIKVIKKEKIKKKRERILREISILKKLK--HPNIVRLYDVFEDEDKLYLVM--EYCDGGDLFD   76 (244)
T ss_pred             CceEEEEEEECCCCcEEEEEEecccccccHHHHHHHHHHHHHhCC--CCcHHHHHhheeeCCEEEEEE--eCCCCCCHHH
Confidence            48999999954 58899999997654333 678999999999998  999999999999888888887  6666555544


Q ss_pred             hhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhcc
Q 039630          124 KLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEI  170 (174)
Q Consensus       124 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  170 (174)
                      .+..                ...+++..+..++.+++.++.|||+..
T Consensus        77 ~~~~----------------~~~~~~~~~~~~~~~l~~~l~~lh~~~  107 (244)
T smart00220       77 LLKK----------------RGRLSEDEARFYARQILSALEYLHSNG  107 (244)
T ss_pred             HHHh----------------ccCCCHHHHHHHHHHHHHHHHHHHHcC
Confidence            2211                112678888999999999999999863

Phosphotransferases. Serine or threonine-specific kinase subfamily.

>KOG0608 consensus Warts/lats-like serine threonine kinases [Cell cycle control, cell division, chromosome partitioning]

Probab=98.94  E-value=9.6e-10  Score=85.26  Aligned_cols=119  Identities=21%  Similarity=0.246  Sum_probs=91.3

Q ss_pred             CCeeecceecccCCeeEEEEE-EcCCCEEEEEEeeccC---ccchhHHHHHHHHHhcccccCCCeeeeecceecCCCccc
Q 039630           34 NGFRTSNKIGEGGFGSVYKGR-LEDGTVVAVNVLSVES---KQGETEFMSEVASMANINICHENLVKLHGGCIDGPSRIL  109 (174)
Q Consensus        34 ~~~~~~~~lg~G~~g~V~~~~-~~~~~~~avK~~~~~~---~~~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~~~~~~~l  109 (174)
                      .-|..++.||-|+||.|..+. ..+...+|+|.+.+.+   ...+..+..|..||...+  +++||+++-.|.+.+.+|.
T Consensus       629 SmFvkik~iGvGAFGeV~Lv~KvDT~~lYAmKTLrKaDVl~rnQvaHVKAERDILAEAD--n~WVVrLyySFQDkdnLYF  706 (1034)
T KOG0608|consen  629 SMFVKIKTIGVGAFGEVCLVRKVDTRALYAMKTLRKADVLMRNQVAHVKAERDILAEAD--NEWVVRLYYSFQDKDNLYF  706 (1034)
T ss_pred             cceEEEeeecccccceeEEEeecchhhHHHHhhhHHHHHHhhhhhhhhhhhhhhHhhcC--CcceEEEEEEeccCCceEE
Confidence            347788999999999999988 5567788999887653   344667888999999998  9999999999999999998


Q ss_pred             chhhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHH------HHHHhhhccCC
Q 039630          110 APLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIAR------GLAYIHEEIKT  172 (174)
Q Consensus       110 v~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~------gl~yLH~~~~~  172 (174)
                      ||  +|++++.+...+...+                .+.+..+..++..+..      -|.|+|..+||
T Consensus       707 VM--dYIPGGDmMSLLIrmg----------------IFeE~LARFYIAEltcAiesVHkmGFIHRDiKP  757 (1034)
T KOG0608|consen  707 VM--DYIPGGDMMSLLIRMG----------------IFEEDLARFYIAELTCAIESVHKMGFIHRDIKP  757 (1034)
T ss_pred             EE--eccCCccHHHHHHHhc----------------cCHHHHHHHHHHHHHHHHHHHHhccceecccCc
Confidence            88  8889888877664433                3555555555555544      45566777776

>KOG0614 consensus cGMP-dependent protein kinase [Signal transduction mechanisms]

Probab=98.88  E-value=2.7e-10  Score=86.07  Aligned_cols=117  Identities=19%  Similarity=0.248  Sum_probs=91.8

Q ss_pred             CCeeecceecccCCeeEEEEEEcC-CCEEEEEEeecc---CccchhHHHHHHHHHhcccccCCCeeeeecceecCCCccc
Q 039630           34 NGFRTSNKIGEGGFGSVYKGRLED-GTVVAVNVLSVE---SKQGETEFMSEVASMANINICHENLVKLHGGCIDGPSRIL  109 (174)
Q Consensus        34 ~~~~~~~~lg~G~~g~V~~~~~~~-~~~~avK~~~~~---~~~~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~~~~~~~l  109 (174)
                      .++..+..||-|+||.|-...... ...+|+|++++.   ..+..+.+..|-.||..++  .+.|+++|..|.+....|+
T Consensus       420 ~dl~~iaTLGvGgFGRVELV~~~~~~~~fAlKilkK~hIVdtkQqeHv~sEr~Im~~~~--s~fIvrLYrTfrd~kyvYm  497 (732)
T KOG0614|consen  420 SDLKRIATLGVGGFGRVELVKVNSQKATFALKILKKKHIVDTKQQEHVFSERNIMMECR--SDFIVRLYRTFRDSKYVYM  497 (732)
T ss_pred             hhhhhhhhcccCccceEEEEEecccchHHHHHHHhHhhccchhHHHHHHhHHHHHHhcC--chHHHHHHHHhccchhhhh
Confidence            467778899999999998877443 335899999866   3455667889999999998  9999999999988877666


Q ss_pred             chhhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhcc
Q 039630          110 APLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEI  170 (174)
Q Consensus       110 v~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  170 (174)
                      ++  +.+-++.++.-+.                .+..+.......++..+++|++|||++.
T Consensus       498 Lm--EaClGGElWTiLr----------------dRg~Fdd~tarF~~acv~EAfeYLH~k~  540 (732)
T KOG0614|consen  498 LM--EACLGGELWTILR----------------DRGSFDDYTARFYVACVLEAFEYLHRKG  540 (732)
T ss_pred             hH--HhhcCchhhhhhh----------------hcCCcccchhhhhHHHHHHHHHHHHhcC
Confidence            66  7777788877442                3345666677778899999999999864

>KOG1164 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]

Probab=98.86  E-value=3e-08  Score=73.17  Aligned_cols=118  Identities=18%  Similarity=0.170  Sum_probs=81.2

Q ss_pred             CeeecceecccCCeeEEEEEEcC--CCEEEEEEeeccCccchhHHHHHHHHHhcccc--cCCCeeeeecce-ecCCCccc
Q 039630           35 GFRTSNKIGEGGFGSVYKGRLED--GTVVAVNVLSVESKQGETEFMSEVASMANINI--CHENLVKLHGGC-IDGPSRIL  109 (174)
Q Consensus        35 ~~~~~~~lg~G~~g~V~~~~~~~--~~~~avK~~~~~~~~~~~~~~~e~~~l~~l~~--~h~~i~~~~~~~-~~~~~~~l  109 (174)
                      .|.+.+.||+|+||.||.+....  ...+|+|.-..........+..|+.++..+..  ...++..+.+.. ......++
T Consensus        19 ~~~i~~~iG~G~fG~V~~v~~~~~~~~~~a~K~e~~~~~~~~~~l~~E~~vl~~l~~~~~~~~~~~~~~~G~~~~~~~~i   98 (322)
T KOG1164|consen   19 RYKLGKKIGEGGFGAVYLVSDKSEKNKEYAKKLEKKELGSKPSVLKIEIQVLKKLEKKNGPSHFPKLLDHGRSTEDFNFI   98 (322)
T ss_pred             ceEEeeeccccCCceEEEEEecCCCCeeEEEEEEEecccCCCccchhHHHHHHHHhhhcCCCCCCEEEEeccCCCceeEE
Confidence            79999999999999999999433  34788888875533333367788888887751  125777887777 46666777


Q ss_pred             chhhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhc
Q 039630          110 APLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEE  169 (174)
Q Consensus       110 v~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~  169 (174)
                      |+...+.....+...                 .....++....+.++.|++.+|.+||+.
T Consensus        99 VM~l~G~sL~dl~~~-----------------~~~~~fs~~T~l~ia~q~l~~l~~lH~~  141 (322)
T KOG1164|consen   99 VMSLLGPSLEDLRKR-----------------NPPGRFSRKTVLRIAIQNLNALEDLHSK  141 (322)
T ss_pred             EEeccCccHHHHHHh-----------------CCCCCcCHhHHHHHHHHHHHHHHHHHhc
Confidence            763333333333221                 1134578888999999999999877764

>KOG1163 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]

Probab=98.85  E-value=1.7e-08  Score=70.05  Aligned_cols=117  Identities=16%  Similarity=0.212  Sum_probs=81.0

Q ss_pred             cCCeeecceecccCCeeEEEEE-EcCCCEEEEEEeeccCccchhHHHHHHHHHhcccccCCCeeeeecceecCCCcccch
Q 039630           33 TNGFRTSNKIGEGGFGSVYKGR-LEDGTVVAVNVLSVESKQGETEFMSEVASMANINICHENLVKLHGGCIDGPSRILAP  111 (174)
Q Consensus        33 ~~~~~~~~~lg~G~~g~V~~~~-~~~~~~~avK~~~~~~~~~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~~~~~~~lv~  111 (174)
                      .+.|.++++||+|+||.+|.|. ...|..||+|+=+...  ....+..|..+.+.++ .-..+..+.-.........+|+
T Consensus        14 ~gky~lvrkiGsGSFGdIy~~~~i~~ge~VAiK~Es~~a--~hpqL~yEskvY~iL~-~g~GiP~i~~y~~e~~ynvlVM   90 (341)
T KOG1163|consen   14 GGKYKLVRKIGSGSFGDIYLGISITSGEEVAIKLESSKA--KHPQLLYESKVYRILQ-GGVGIPHIRHYGTEKDYNVLVM   90 (341)
T ss_pred             ccceEEEEeecCCchhheeeeeeccCCceEEEEeecccC--CCcchhHHHHHHHHhc-cCCCCchhhhhccccccceeee
Confidence            4679999999999999999999 7889999999864331  2235667788777776 2355666666666666666766


Q ss_pred             hhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhcc
Q 039630          112 LQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEI  170 (174)
Q Consensus       112 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  170 (174)
                      +--+...-.| ..+|                 ...++...++.++-|++.-++|+|.++
T Consensus        91 dLLGPsLEdL-fnfC-----------------~R~ftmkTvLMLaDQml~RiEyvH~r~  131 (341)
T KOG1163|consen   91 DLLGPSLEDL-FNFC-----------------SRRFTMKTVLMLADQMLSRIEYVHLRN  131 (341)
T ss_pred             eccCccHHHH-HHHH-----------------hhhhhHHhHHHHHHHHHHHHHHHHhhc
Confidence            2222221222 2222                 234788889999999999999987643

>KOG1167 consensus Serine/threonine protein kinase of the CDC7 subfamily involved in DNA synthesis, repair and recombination [Replication, recombination and repair]

Probab=98.80  E-value=8.3e-09  Score=76.05  Aligned_cols=118  Identities=21%  Similarity=0.327  Sum_probs=92.9

Q ss_pred             HHhhcCCeeecceecccCCeeEEEEE-Ec---CCCEEEEEEeeccCccchhHHHHHHHHHhcccccCCCeeeeecceecC
Q 039630           29 LKIATNGFRTSNKIGEGGFGSVYKGR-LE---DGTVVAVNVLSVESKQGETEFMSEVASMANINICHENLVKLHGGCIDG  104 (174)
Q Consensus        29 ~~~~~~~~~~~~~lg~G~~g~V~~~~-~~---~~~~~avK~~~~~~~~~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~~~  104 (174)
                      +....+.|..+.+||+|.|+.||+++ ..   .+..||+|.+...  .....+..|+++|..+. ++.||+++.+++...
T Consensus        31 ~p~~~~~~~~v~kigeGsFssv~~a~~~~~~~~~~~valk~i~~t--s~p~ri~~El~~L~~~g-G~~ni~~~~~~~rnn  107 (418)
T KOG1167|consen   31 IPFISNAYKVVNKIGEGSFSSVYKATDIEQDTKRRYVALKAIYRT--SSPSRILNELEMLYRLG-GSDNIIKLNGCFRNN  107 (418)
T ss_pred             hhhhhhhhhhhccccccchhhhhhhhHhhhccccceEeeeecccc--cCchHHHHHHHHHHHhc-cchhhhcchhhhccC
Confidence            34445678999999999999999999 33   4678999988533  34557889999999997 799999999999999


Q ss_pred             CCcccchhhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhcc
Q 039630          105 PSRILAPLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEI  170 (174)
Q Consensus       105 ~~~~lv~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  170 (174)
                      +....|+  ++.++......+.                   .++...+..+.+.+..||.++|.+.
T Consensus       108 d~v~ivl--p~~~H~~f~~l~~-------------------~l~~~~i~~Yl~~ll~Al~~~h~~G  152 (418)
T KOG1167|consen  108 DQVAIVL--PYFEHDRFRDLYR-------------------SLSLAEIRWYLRNLLKALAHLHKNG  152 (418)
T ss_pred             CeeEEEe--cccCccCHHHHHh-------------------cCCHHHHHHHHHHHHHHhhhhhccC
Confidence            9888887  6666665554331                   2567788889999999999997654

>smart00090 RIO RIO-like kinase

Probab=98.80  E-value=2.5e-08  Score=70.39  Aligned_cols=112  Identities=14%  Similarity=-0.013  Sum_probs=72.4

Q ss_pred             CeeecceecccCCeeEEEEE--EcCCCEEEEEEeeccCcc------------------------chhHHHHHHHHHhccc
Q 039630           35 GFRTSNKIGEGGFGSVYKGR--LEDGTVVAVNVLSVESKQ------------------------GETEFMSEVASMANIN   88 (174)
Q Consensus        35 ~~~~~~~lg~G~~g~V~~~~--~~~~~~~avK~~~~~~~~------------------------~~~~~~~e~~~l~~l~   88 (174)
                      -|.+.+.||+|++|.||+|.  ..+|+.||+|+++.....                        ....+..|+.++..+.
T Consensus        29 ~~~i~~~Lg~G~~g~Vy~a~~~~~~g~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~L~~L~  108 (237)
T smart00090       29 LSAIGGCISTGKEANVYHALDFDGSGKERAVKIYRTGTLEFKRRDRYVDGDFRFKYRKINPRKLVRLWAEKEFRNLQRLY  108 (237)
T ss_pred             hHHhCCeeccCcceeEEEEEecCCCCcEEEEEEEEcCcceecchhhhcccchhhccCCCCHHHHHHHHHHHHHHHHHHHH
Confidence            57888999999999999998  568999999999754210                        0123567888888886


Q ss_pred             ccCCC--eeeeecceecCCCcccchhhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHh
Q 039630           89 ICHEN--LVKLHGGCIDGPSRILAPLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYI  166 (174)
Q Consensus        89 ~~h~~--i~~~~~~~~~~~~~~lv~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yL  166 (174)
                        +..  +.++++.    ...++++  ++.++..+....                .............++.|++.++.+|
T Consensus       109 --~~~i~~p~~~~~----~~~~lV~--E~~~g~~L~~~~----------------~~~~~~~~~~~~~i~~qi~~~l~~L  164 (237)
T smart00090      109 --EAGVPVPKPIAW----RRNVLVM--EFIGGDGLPAPR----------------LKDVEPEEEEEFELYDDILEEMRKL  164 (237)
T ss_pred             --hcCCCCCeeeEe----cCceEEE--EEecCCcccccc----------------cccCCcchHHHHHHHHHHHHHHHHH
Confidence              422  3333322    1234555  554443332210                0111234555678999999999999


Q ss_pred             hhcc
Q 039630          167 HEEI  170 (174)
Q Consensus       167 H~~~  170 (174)
                      |++.
T Consensus       165 H~~g  168 (237)
T smart00090      165 YKEG  168 (237)
T ss_pred             HhcC
Confidence            9875

>PRK14879 serine/threonine protein kinase; Provisional

Probab=98.79  E-value=3.9e-08  Score=68.02  Aligned_cols=106  Identities=15%  Similarity=0.075  Sum_probs=74.7

Q ss_pred             ceecccCCeeEEEEEEcCCCEEEEEEeeccCcc--------chhHHHHHHHHHhcccccCCCeeeeecceecCCCcccch
Q 039630           40 NKIGEGGFGSVYKGRLEDGTVVAVNVLSVESKQ--------GETEFMSEVASMANINICHENLVKLHGGCIDGPSRILAP  111 (174)
Q Consensus        40 ~~lg~G~~g~V~~~~~~~~~~~avK~~~~~~~~--------~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~~~~~~~lv~  111 (174)
                      +.||+|++|.||+|.. +|..+++|........        ....+.+|+.++..+.  ++++......+...+..++++
T Consensus         2 ~~l~~G~~~~vy~~~~-~~~~~~vK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~--~~~i~~p~~~~~~~~~~~lv~   78 (211)
T PRK14879          2 KLIKRGAEAEIYLGDF-LGIKAVIKWRIPKRYRHPELDERIRRERTRREARIMSRAR--KAGVNVPAVYFVDPENFIIVM   78 (211)
T ss_pred             cccccCceEEEEEEee-CCCceEEEEeCCcCCcChHHHHHHHHHHHHHHHHHHHHHH--HCCCCCCeEEEEeCCCCEEEE
Confidence            5789999999999987 5778999986543211        1235778999999988  888777666666666666776


Q ss_pred             hhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhcc
Q 039630          112 LQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEI  170 (174)
Q Consensus       112 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  170 (174)
                        ++.++..+...+..                   ... ....++.+++.+|.++|+..
T Consensus        79 --e~~~G~~L~~~~~~-------------------~~~-~~~~i~~~i~~~l~~lH~~~  115 (211)
T PRK14879         79 --EYIEGEPLKDLINS-------------------NGM-EELELSREIGRLVGKLHSAG  115 (211)
T ss_pred             --EEeCCcCHHHHHHh-------------------ccH-HHHHHHHHHHHHHHHHHhCC
Confidence              66655555432200                   111 66778999999999999753

>KOG0670 consensus U4/U6-associated splicing factor PRP4 [RNA processing and modification]

Probab=98.78  E-value=1.4e-08  Score=77.25  Aligned_cols=122  Identities=18%  Similarity=0.206  Sum_probs=85.7

Q ss_pred             CCeeecceecccCCeeEEEEE-EcCCCEEEEEEeeccCccchhHHHHHHHHHhcccc----cCCCeeeeecceecCCCcc
Q 039630           34 NGFRTSNKIGEGGFGSVYKGR-LEDGTVVAVNVLSVESKQGETEFMSEVASMANINI----CHENLVKLHGGCIDGPSRI  108 (174)
Q Consensus        34 ~~~~~~~~lg~G~~g~V~~~~-~~~~~~~avK~~~~~~~~~~~~~~~e~~~l~~l~~----~h~~i~~~~~~~~~~~~~~  108 (174)
                      +.|.+....|.|-|+.|.+|. ...|..||||+|..+..... .=+.|++||++|..    .--+++.++..|...++++
T Consensus       432 ~RY~V~~~~GkGvFs~Vvra~D~~r~~~vAiKIIRnNE~M~K-tGl~EleiLkKL~~AD~Edk~Hclrl~r~F~hknHLC  510 (752)
T KOG0670|consen  432 SRYEVQGYTGKGVFSTVVRARDQARGQEVAIKIIRNNEVMHK-TGLKELEILKKLNDADPEDKFHCLRLFRHFKHKNHLC  510 (752)
T ss_pred             ceeEEEeccccceeeeeeeccccCCCCeeEEEEeecchHHhh-hhhHHHHHHHHhhccCchhhhHHHHHHHHhhhcceeE
Confidence            346777788999999999998 45578999999986533333 34689999999852    2245888999999999999


Q ss_pred             cchhhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHh------hhccCC
Q 039630          109 LAPLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYI------HEEIKT  172 (174)
Q Consensus       109 lv~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yL------H~~~~~  172 (174)
                      +||+.-.+..-.++..+                +.+.-+....+..++.|+..||.+|      |..++|
T Consensus       511 lVFE~LslNLRevLKKy----------------G~nvGL~ikaVRsYaqQLflALklLK~c~vlHaDIKP  564 (752)
T KOG0670|consen  511 LVFEPLSLNLREVLKKY----------------GRNVGLHIKAVRSYAQQLFLALKLLKKCGVLHADIKP  564 (752)
T ss_pred             EEehhhhchHHHHHHHh----------------CcccceeehHHHHHHHHHHHHHHHHHhcCeeecccCc
Confidence            99955444444444433                2222355566666777777776665      777776

>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]

Probab=98.78  E-value=7.9e-09  Score=79.73  Aligned_cols=114  Identities=20%  Similarity=0.246  Sum_probs=86.3

Q ss_pred             cCCeeecceecccCCeeEEEEE-EcCCCEEEEEEeeccCccchhHHHHHHHHHhcccccCCCeeeeecceecCCCcccch
Q 039630           33 TNGFRTSNKIGEGGFGSVYKGR-LEDGTVVAVNVLSVESKQGETEFMSEVASMANINICHENLVKLHGGCIDGPSRILAP  111 (174)
Q Consensus        33 ~~~~~~~~~lg~G~~g~V~~~~-~~~~~~~avK~~~~~~~~~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~~~~~~~lv~  111 (174)
                      ...|.....+|.|+|+.|..|. ..+++..++|++...    ......|+.++.... .|+|++++.+.+.+.-+.++|+
T Consensus       321 ~~~y~~~~~~~~gs~s~~~~~~~~~t~~~~~vkii~~~----~~~~~~e~~~~~~~~-~h~niv~~~~v~~~~~~~~~v~  395 (612)
T KOG0603|consen  321 TESYEFREELGEGSFSAVKYCESSPTDQEPAVKIISKR----ADDNQDEIPISLLVR-DHPNIVKSHDVYEDGKEIYLVM  395 (612)
T ss_pred             chhhccccccCCCCccceeeeeccccccchhheecccc----ccccccccchhhhhc-CCCcceeecceecCCceeeeee
Confidence            3567888889999999999998 677889999999755    223345665555544 4999999999999998888888


Q ss_pred             hhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhcc
Q 039630          112 LQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEI  170 (174)
Q Consensus       112 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  170 (174)
                        +...++.+....                 .+.+.....+..++.+++.++.|||++.
T Consensus       396 --e~l~g~ell~ri-----------------~~~~~~~~e~~~w~~~lv~Av~~LH~~g  435 (612)
T KOG0603|consen  396 --ELLDGGELLRRI-----------------RSKPEFCSEASQWAAELVSAVDYLHEQG  435 (612)
T ss_pred             --hhccccHHHHHH-----------------HhcchhHHHHHHHHHHHHHHHHHHHhcC
Confidence              777766666522                 1112233666779999999999999965

>KOG1165 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]

Probab=98.74  E-value=9e-08  Score=69.30  Aligned_cols=115  Identities=23%  Similarity=0.306  Sum_probs=81.7

Q ss_pred             cCCeeecceecccCCeeEEEEE-EcCCCEEEEEEeeccCccchhHHHHHHHHHhcccccCCCeeeeecceecCCCcccch
Q 039630           33 TNGFRTSNKIGEGGFGSVYKGR-LEDGTVVAVNVLSVESKQGETEFMSEVASMANINICHENLVKLHGGCIDGPSRILAP  111 (174)
Q Consensus        33 ~~~~~~~~~lg~G~~g~V~~~~-~~~~~~~avK~~~~~~~~~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~~~~~~~lv~  111 (174)
                      .-.|+++++||+|+||.++.|. +=++++||+|.=+.  ...+..+.-|-...+.|. ..++|...+-+....-...+|+
T Consensus        27 G~hyrVGkKIGeGsFG~lf~G~Nl~nne~VAIKfEPr--kS~APQLrdEYr~YKlL~-g~~GIP~vYYFGqeG~~NiLVi  103 (449)
T KOG1165|consen   27 GPHYRVGKKIGEGSFGVLFLGKNLYNNEPVAIKFEPR--KSEAPQLRDEYRTYKLLG-GTEGIPQVYYFGQEGKYNILVI  103 (449)
T ss_pred             cccceeccccccCcceeeecccccccCceEEEEeccc--cCCcchHHHHHHHHHHHc-CCCCCCceeeeccccchhhhhh
Confidence            3469999999999999999999 66799999997542  234456667777676665 4677777766555555555555


Q ss_pred             hhhhh-hhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhc
Q 039630          112 LQASI-EALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEE  169 (174)
Q Consensus       112 ~~~~~-~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~  169 (174)
                        +.. +.+.-+.++|+                 ..++...++.+|.|+..-++|+|++
T Consensus       104 --dLLGPSLEDLFD~Cg-----------------R~FSvKTV~miA~Qmi~rie~vH~k  143 (449)
T KOG1165|consen  104 --DLLGPSLEDLFDLCG-----------------RRFSVKTVAMIAKQMITRIEYVHEK  143 (449)
T ss_pred             --hhhCcCHHHHHHHhc-----------------CcccHHhHHHHHHHHHHHHHHHHhc
Confidence              321 22222333432                 3588899999999999999999985

>KOG1027 consensus Serine/threonine protein kinase and endoribonuclease ERN1/IRE1, sensor of the unfolded protein response pathway [Signal transduction mechanisms]

Probab=98.71  E-value=2.6e-08  Score=79.17  Aligned_cols=113  Identities=23%  Similarity=0.217  Sum_probs=76.5

Q ss_pred             eeecceecccCCee-EEEEEEcCCCEEEEEEeeccCccchhHHHHHHHHHhcccccCCCeeeeecceecCCCcccchhhh
Q 039630           36 FRTSNKIGEGGFGS-VYKGRLEDGTVVAVNVLSVESKQGETEFMSEVASMANINICHENLVKLHGGCIDGPSRILAPLQA  114 (174)
Q Consensus        36 ~~~~~~lg~G~~g~-V~~~~~~~~~~~avK~~~~~~~~~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~~~~~~~lv~~~~  114 (174)
                      +...+++|.|+.|. ||+|... |+.||||.+-   .+..+-..+|+..|+..+ .||||+++++.-.+..+.|+..  +
T Consensus       511 ~~~~eilG~Gs~Gt~Vf~G~ye-~R~VAVKrll---~e~~~~A~rEi~lL~eSD-~H~NviRyyc~E~d~qF~YIal--E  583 (903)
T KOG1027|consen  511 FSPKEILGYGSNGTVVFRGVYE-GREVAVKRLL---EEFFDFAQREIQLLQESD-EHPNVIRYYCSEQDRQFLYIAL--E  583 (903)
T ss_pred             eccHHHcccCCCCcEEEEEeeC-CceehHHHHh---hHhHHHHHHHHHHHHhcc-CCCceEEEEeeccCCceEEEEe--h
Confidence            45567899999876 8999885 7799999885   334456789999999887 7999999999988888877766  3


Q ss_pred             hhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhh
Q 039630          115 SIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHE  168 (174)
Q Consensus       115 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~  168 (174)
                      .+. +.| .++.... ..+       ..   ...-...+.+..|++.||++||+
T Consensus       584 LC~-~sL-~dlie~~-~~d-------~~---~~~~i~~~~~l~q~~~GlaHLHs  624 (903)
T KOG1027|consen  584 LCA-CSL-QDLIESS-GLD-------VE---MQSDIDPISVLSQIASGLAHLHS  624 (903)
T ss_pred             Hhh-hhH-HHHHhcc-ccc-------hh---hcccccHHHHHHHHHHHHHHHHh
Confidence            221 111 2222111 000       00   01113345678899999999987

>PLN03225 Serine/threonine-protein kinase SNT7; Provisional

Probab=98.70  E-value=4.7e-08  Score=77.19  Aligned_cols=131  Identities=15%  Similarity=0.096  Sum_probs=67.7

Q ss_pred             hcCCeeecceecccCCeeEEEEEE-cC----CCEEEEEEeeccCccchhHHHHHHHHHhcccccCCCeeeeecc------
Q 039630           32 ATNGFRTSNKIGEGGFGSVYKGRL-ED----GTVVAVNVLSVESKQGETEFMSEVASMANINICHENLVKLHGG------  100 (174)
Q Consensus        32 ~~~~~~~~~~lg~G~~g~V~~~~~-~~----~~~~avK~~~~~~~~~~~~~~~e~~~l~~l~~~h~~i~~~~~~------  100 (174)
                      ..++|...+.||+|+||.||+|.. .+    +..+|+|.+.....  ......+ . +....  +.++..+...      
T Consensus       130 ~~~~y~l~~~LG~G~FG~VYka~~~~~~~~~~~~vAvK~~~~~~~--~e~~~~e-~-l~~~~--~~~~~~~~~~~~~~~~  203 (566)
T PLN03225        130 KKDDFVLGKKLGEGAFGVVYKASLVNKQSKKEGKYVLKKATEYGA--VEIWMNE-R-VRRAC--PNSCADFVYGFLEPVS  203 (566)
T ss_pred             ccCCeEEeEEEeeCCCeEEEEEEEcCCccccCcEEEEEEecccch--hHHHHHH-H-HHhhc--hhhHHHHHHhhhcccc
Confidence            446899999999999999999994 45    68999998863321  1111111 1 11111  1222221111      


Q ss_pred             eecCCCcccchhhhhhhhhhhhhhhhcccceeeee--ee--cCCCCCcccCCHHHHHHHHHHHHHHHHHhhhcc
Q 039630          101 CIDGPSRILAPLQASIEALFLFTKLWKMDKFISIY--VV--SGSKKNRVKFNWIARREIALGIARGLAYIHEEI  170 (174)
Q Consensus       101 ~~~~~~~~lv~~~~~~~~~~l~~~~~~~~~~~~~~--~~--~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  170 (174)
                      ....+..++++  ++...+.+...+..........  ..  ..............+..++.|++.||.|||++.
T Consensus       204 ~~~~~~~~LV~--ey~~~gsL~~~l~~~~~~~~v~~~l~~~~~~l~~~~~r~~~~i~~i~~qll~aL~yLH~~g  275 (566)
T PLN03225        204 SKKEDEYWLVW--RYEGESTLADLMQSKEFPYNVEPYLLGKVQDLPKGLERENKIIQTIMRQILFALDGLHSTG  275 (566)
T ss_pred             cccCCceEEEE--EecCCCcHHHHHHhcCCchhHHHHhccchhhccccchhhHHHHHHHHHHHHHHHHHHHHCC
Confidence            12344566666  5555555443332111000000  00  000001111234456679999999999999853

>KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis]

Probab=98.69  E-value=9.6e-09  Score=84.47  Aligned_cols=69  Identities=30%  Similarity=0.524  Sum_probs=58.9

Q ss_pred             CCeeecceecccCCeeEEEEE-EcCCCEEEEEEeeccC-ccchhHHHHHHHHHhcccccCCCeeeeecceecC
Q 039630           34 NGFRTSNKIGEGGFGSVYKGR-LEDGTVVAVNVLSVES-KQGETEFMSEVASMANINICHENLVKLHGGCIDG  104 (174)
Q Consensus        34 ~~~~~~~~lg~G~~g~V~~~~-~~~~~~~avK~~~~~~-~~~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~~~  104 (174)
                      ++|+.++.||+|+||.||+++ .=+|+.+|||.|.... ......+.+|+.++.+++  ||||++++..+...
T Consensus       479 ~DFEEL~lLGkGGFG~VvkVRNKlDGr~YAIKKIpl~~s~~~~skI~rEVk~LArLn--HpNVVRYysAWVEs  549 (1351)
T KOG1035|consen  479 NDFEELELLGKGGFGSVVKVRNKLDGREYAIKKIPLKASDKLYSKILREVKLLARLN--HPNVVRYYSAWVES  549 (1351)
T ss_pred             hhhHHHHHhcCCCCceEEEEeecccchhhhhhhccCchHHHHHHHHHHHHHHHhhcC--Ccceeeeehhhhcc
Confidence            568888999999999999999 5679999999998663 334556899999999999  99999999887653

>PRK09605 bifunctional UGMP family protein/serine/threonine protein kinase; Validated

Probab=98.67  E-value=1.6e-07  Score=73.88  Aligned_cols=107  Identities=12%  Similarity=0.047  Sum_probs=73.2

Q ss_pred             CeeecceecccCCeeEEEEEEcCCCEEEEEEe-ecc-Cc------cchhHHHHHHHHHhcccccCCCeeeeecceecCCC
Q 039630           35 GFRTSNKIGEGGFGSVYKGRLEDGTVVAVNVL-SVE-SK------QGETEFMSEVASMANINICHENLVKLHGGCIDGPS  106 (174)
Q Consensus        35 ~~~~~~~lg~G~~g~V~~~~~~~~~~~avK~~-~~~-~~------~~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~~~~~  106 (174)
                      .|...+.||+|+||.||++.+.... +++|.. ... ..      .....+.+|+.++..+.  |++++.....+...+.
T Consensus       334 ~~~~~~~iG~G~~g~Vy~~~~~~~~-~v~k~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~--~~~i~~p~~~~~~~~~  410 (535)
T PRK09605        334 RKIPDHLIGKGAEADIKKGEYLGRD-AVIKERVPKGYRHPELDERLRTERTRAEARLLSEAR--RAGVPTPVIYDVDPEE  410 (535)
T ss_pred             ccCccceeccCCcEEEEEEeecCcc-ceeEEEecccccchhHHHHHHHHHHHHHHHHHHhhc--ccCCCeeEEEEEeCCC
Confidence            3456789999999999999865433 344332 211 11      11345789999999998  9998887766666666


Q ss_pred             cccchhhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhcc
Q 039630          107 RILAPLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEI  170 (174)
Q Consensus       107 ~~lv~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  170 (174)
                      .++++  ++.++..+...+                        .....++.|++.+|.|||++.
T Consensus       411 ~~lv~--E~~~g~~L~~~l------------------------~~~~~~~~~i~~~L~~lH~~g  448 (535)
T PRK09605        411 KTIVM--EYIGGKDLKDVL------------------------EGNPELVRKVGEIVAKLHKAG  448 (535)
T ss_pred             CEEEE--EecCCCcHHHHH------------------------HHHHHHHHHHHHHHHHHHhCC
Confidence            66776  666655554322                        134568999999999999854

>PRK10359 lipopolysaccharide core biosynthesis protein; Provisional

Probab=98.63  E-value=2.3e-07  Score=64.87  Aligned_cols=70  Identities=13%  Similarity=0.060  Sum_probs=54.5

Q ss_pred             hcCCeeecceecccCCeeEEEEEEcCCCEEEEEEeeccCccchh---H------HHHHHHHHhcccccCCCeeeeeccee
Q 039630           32 ATNGFRTSNKIGEGGFGSVYKGRLEDGTVVAVNVLSVESKQGET---E------FMSEVASMANINICHENLVKLHGGCI  102 (174)
Q Consensus        32 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~avK~~~~~~~~~~~---~------~~~e~~~l~~l~~~h~~i~~~~~~~~  102 (174)
                      ..++|+.++++|+|+||.||.... ++..+++|++.........   .      +.+|+..+.++.  |+++..+...+.
T Consensus        29 l~~~y~~~~~l~~~~f~~v~l~~~-~~~~~iiKvf~~~~~~~~~~~~~f~~g~~~e~Ea~~l~rL~--~~GI~~~~d~~~  105 (232)
T PRK10359         29 LSYNIKTIKVFRNIDDTKVSLIDT-DYGKYILKVFAPKVKRTERFLKSFVKGDYYENLIVQTDRVR--SEGLASLNDFYL  105 (232)
T ss_pred             hhCceEEEEEecCCCceEEEEEec-CCCcEEEEEechhcCchHHHHHhhhhhHHHHHHHHHHHHHH--HCCCCcceEeee
Confidence            457899999999999999999766 4668999999755322222   2      578888999998  999999888765


Q ss_pred             cC
Q 039630          103 DG  104 (174)
Q Consensus       103 ~~  104 (174)
                      ..
T Consensus       106 ~~  107 (232)
T PRK10359        106 LA  107 (232)
T ss_pred             ec
Confidence            43

>TIGR03724 arch_bud32 Kae1-associated kinase Bud32

Probab=98.56  E-value=3.4e-07  Score=62.80  Aligned_cols=102  Identities=15%  Similarity=0.076  Sum_probs=66.6

Q ss_pred             eecccCCeeEEEEEEcCCCEEEEEEeeccCc-c-------chhHHHHHHHHHhcccccCCCeeeeecceecCCCcccchh
Q 039630           41 KIGEGGFGSVYKGRLEDGTVVAVNVLSVESK-Q-------GETEFMSEVASMANINICHENLVKLHGGCIDGPSRILAPL  112 (174)
Q Consensus        41 ~lg~G~~g~V~~~~~~~~~~~avK~~~~~~~-~-------~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~~~~~~~lv~~  112 (174)
                      .||+|+||.||++.+ ++..+++|....... .       ....+.+|+.++..+.  ++++......+...+..++++ 
T Consensus         1 ~ig~G~~~~vy~~~~-~~~~~viK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~--~~~i~~p~~~~~~~~~~~lv~-   76 (199)
T TIGR03724         1 LIAKGAEAIIYLGDF-LGLKAVIKERVPKSYRHPELDERIRRERTRNEARLLSRAR--KAGVNTPVVYDVDPDNKTIVM-   76 (199)
T ss_pred             CCCCCceEEEEEeec-CCccEEEEEecCCcCcCchHHHHHHHHHHHHHHHHHHHHH--HCCCCCCEEEEEECCCCEEEE-
Confidence            379999999999985 467899998653311 1       1245678999999887  766554444444555556666 


Q ss_pred             hhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhcc
Q 039630          113 QASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEI  170 (174)
Q Consensus       113 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  170 (174)
                       ++.++..+...+.                .    ...   .++.+++.+|.+||+..
T Consensus        77 -e~~~g~~l~~~~~----------------~----~~~---~~~~~i~~~l~~lH~~g  110 (199)
T TIGR03724        77 -EYIEGKPLKDVIE----------------E----GND---ELLREIGRLVGKLHKAG  110 (199)
T ss_pred             -EEECCccHHHHHh----------------h----cHH---HHHHHHHHHHHHHHHCC
Confidence             5555554433110                0    000   68899999999999853

Members of this protein family are the Bud32 protein associated with Kae1 (kinase-associated endopeptidase 1) in the Archaea. In many Archaeal genomes, Kae1 and Bud32 are fused. The complex is homologous to the Kae1 and Bud32 subunits of the eukaryotic KEOPS complex, an apparently ancient protein kinase-containing molecular machine.

>cd05144 RIO2_C RIO kinase family; RIO2, C-terminal catalytic domain

Probab=98.47  E-value=9.9e-07  Score=60.56  Aligned_cols=106  Identities=17%  Similarity=0.136  Sum_probs=66.4

Q ss_pred             CeeecceecccCCeeEEEEEEcCCCEEEEEEeeccCcc----------------------chhHHHHHHHHHhcccccCC
Q 039630           35 GFRTSNKIGEGGFGSVYKGRLEDGTVVAVNVLSVESKQ----------------------GETEFMSEVASMANINICHE   92 (174)
Q Consensus        35 ~~~~~~~lg~G~~g~V~~~~~~~~~~~avK~~~~~~~~----------------------~~~~~~~e~~~l~~l~~~h~   92 (174)
                      .|...+.||+|+||.||++...+|+.+|||+++.....                      .......|..++..+.  ++
T Consensus        16 ~~~~~~~i~~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~--~~   93 (198)
T cd05144          16 VESLGNQIGVGKESDVYLALDPDGNPVALKFHRLGRTSFRKVKRKRDYLGDRKHASWLYLSRLAAQKEFAALKALY--EE   93 (198)
T ss_pred             hhhcCCccccCcceEEEEEEcCCCCEEEEEEEecccchhhhhcchHHHHhccccchhHHHhHHHHHHHHHHHHHHH--Hc
Confidence            37778999999999999999778999999997643210                      0113567788888776  65


Q ss_pred             C--eeeeecceecCCCcccchhhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhcc
Q 039630           93 N--LVKLHGGCIDGPSRILAPLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEI  170 (174)
Q Consensus        93 ~--i~~~~~~~~~~~~~~lv~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  170 (174)
                      +  +...++.    ...++++  ++.++..+..          .       .     .......++.+++.++.++|+..
T Consensus        94 ~i~v~~~~~~----~~~~lv~--e~~~g~~L~~----------~-------~-----~~~~~~~~~~~i~~~l~~lh~~g  145 (198)
T cd05144          94 GFPVPKPIDW----NRHAVVM--EYIDGVELYR----------V-------R-----VLEDPEEVLDEILEEIVKAYKHG  145 (198)
T ss_pred             CCCCCceeec----CCceEEE--EEeCCcchhh----------c-------c-----ccccHHHHHHHHHHHHHHHHHCC
Confidence            3  3333321    2234444  4444433221          0       0     00233567889999999998753

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO2 is present in archaea and eukaryotes. It contains an N-terminal winged helix (wHTH) domain and a C-terminal RIO kinase catalytic domain. The wHTH domain is primarily seen in DNA-binding proteins, although some wHTH dom

>cd05120 APH_ChoK_like Aminoglycoside 3'-phosphotransferase (APH) and Choline Kinase (ChoK) family

Probab=98.36  E-value=3e-06  Score=54.94  Aligned_cols=101  Identities=19%  Similarity=0.072  Sum_probs=70.5

Q ss_pred             cceecccCCeeEEEEEEcCCCEEEEEEeeccCccchhHHHHHHHHHhcccccC--CCeeeeecceecCCCcccchhhhhh
Q 039630           39 SNKIGEGGFGSVYKGRLEDGTVVAVNVLSVESKQGETEFMSEVASMANINICH--ENLVKLHGGCIDGPSRILAPLQASI  116 (174)
Q Consensus        39 ~~~lg~G~~g~V~~~~~~~~~~~avK~~~~~~~~~~~~~~~e~~~l~~l~~~h--~~i~~~~~~~~~~~~~~lv~~~~~~  116 (174)
                      .+.+|+|.++.||++.... ..+++|.......  ...+..|+.++..+.  +  ..+++++......+..++++  ++.
T Consensus         3 ~~~i~~g~~~~v~~~~~~~-~~~~iK~~~~~~~--~~~~~~e~~~~~~l~--~~~~~~p~~~~~~~~~~~~~~v~--e~~   75 (155)
T cd05120           3 IKLLKGGLTNRVYLLGTKD-EDYVLKINPSREK--GADREREVAILQLLA--RKGLPVPKVLASGESDGWSYLLM--EWI   75 (155)
T ss_pred             ceecccccccceEEEEecC-CeEEEEecCCCCc--hhHHHHHHHHHHHHH--HcCCCCCeEEEEcCCCCccEEEE--Eec
Confidence            4679999999999998653 6799999864432  457889999999987  5  47777777766555555554  322


Q ss_pred             hhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhc
Q 039630          117 EALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEE  169 (174)
Q Consensus       117 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~  169 (174)
                      .+..+..                       ++......++.+++.+++++|..
T Consensus        76 ~g~~~~~-----------------------~~~~~~~~~~~~~~~~l~~lh~~  105 (155)
T cd05120          76 EGETLDE-----------------------VSEEEKEDIAEQLAELLAKLHQL  105 (155)
T ss_pred             CCeeccc-----------------------CCHHHHHHHHHHHHHHHHHHhCC
Confidence            2221110                       14455667889999999999974

The APH/ChoK family is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). The family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides and macrolides, leads to their inactivation and to bacterial antibiotic resistance. Phosphorylation of choline, ethanolamine, and homoserine serves

>PRK12274 serine/threonine protein kinase; Provisional

Probab=98.28  E-value=5.8e-06  Score=57.03  Aligned_cols=102  Identities=12%  Similarity=-0.027  Sum_probs=66.0

Q ss_pred             ecceecccCCeeEEEEEEcCCCEEEEEEeeccCccc----hhHHHHHHHHHhcccccCCCeeeeecceecCCCcccchhh
Q 039630           38 TSNKIGEGGFGSVYKGRLEDGTVVAVNVLSVESKQG----ETEFMSEVASMANINICHENLVKLHGGCIDGPSRILAPLQ  113 (174)
Q Consensus        38 ~~~~lg~G~~g~V~~~~~~~~~~~avK~~~~~~~~~----~~~~~~e~~~l~~l~~~h~~i~~~~~~~~~~~~~~lv~~~  113 (174)
                      ....|++|.||.|+.+.. .+..++.+.++......    ...+.+|+.+|+++. .++++++++++    +..++++  
T Consensus         6 ~~~~l~~~~f~~v~~~~~-~~~k~~~~~l~~~~~~~~~~~~~l~~rE~~iL~~L~-~~~~vP~ll~~----~~~~lvm--   77 (218)
T PRK12274          6 VNEPLKSDTFGRILLVRG-GERKFVRRDLSAAPWWLRGVAWWLARREALALRQLD-GLPRTPRLLHW----DGRHLDR--   77 (218)
T ss_pred             cceeecCCCcceEEEeec-CCceeeecccccchhhhhhHHHHHHHHHHHHHHhcC-CCCCCCEEEEE----cCEEEEE--
Confidence            347899999999997655 57777777776443211    124789999999996 35778888775    2345555  


Q ss_pred             hhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhcc
Q 039630          114 ASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEI  170 (174)
Q Consensus       114 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  170 (174)
                      ++..+..+...                      .+.. ...++.|++.++.++|++.
T Consensus        78 eyI~G~~L~~~----------------------~~~~-~~~~~~qi~~~L~~lH~~G  111 (218)
T PRK12274         78 SYLAGAAMYQR----------------------PPRG-DLAYFRAARRLLQQLHRCG  111 (218)
T ss_pred             eeecCccHHhh----------------------hhhh-hHHHHHHHHHHHHHHHHCc
Confidence            55444433220                      0001 1346778899999998764

>KOG1166 consensus Mitotic checkpoint serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=98.25  E-value=2.1e-06  Score=70.68  Aligned_cols=118  Identities=15%  Similarity=0.166  Sum_probs=81.7

Q ss_pred             hcCCeeecceecccCCeeEEEEEEcCCCEEEEEEeeccCccchhHHHHHHHHHhcccccCCCeeeeecceecCCCcccch
Q 039630           32 ATNGFRTSNKIGEGGFGSVYKGRLEDGTVVAVNVLSVESKQGETEFMSEVASMANINICHENLVKLHGGCIDGPSRILAP  111 (174)
Q Consensus        32 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~avK~~~~~~~~~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~~~~~~~lv~  111 (174)
                      -...|.+.+.+|+|+||.||.|.-.+|+.||+|+-+.....+..-..+-...|+ .. --+.+..+..+..-.+..+++.
T Consensus       696 ~~~~~~I~~e~G~g~y~~vy~a~~~~~~~~alK~e~P~~~WEfYI~~q~~~RLk-~~-~~~~~~~~~~a~~~~~~S~lv~  773 (974)
T KOG1166|consen  696 GGEKFCISKEIGEGSYGSVYVATHSNGKLVALKVEKPPNPWEFYICLQVMERLK-PQ-MLPSIMHISSAHVFQNASVLVS  773 (974)
T ss_pred             cceeEEEEeeeccccceEEEEeecCCCcEEEEEeecCCCceeeeehHHHHHhhc-hh-hhcchHHHHHHHccCCcceeee
Confidence            334688889999999999999996669999999987665544222111111122 11 0245566666666666666666


Q ss_pred             hhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhc
Q 039630          112 LQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEE  169 (174)
Q Consensus       112 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~  169 (174)
                        ++.+.|.|....                +....+++...+.|+.|++..++.||..
T Consensus       774 --ey~~~Gtlld~~----------------N~~~~m~e~lv~~~~~qml~ive~lH~~  813 (974)
T KOG1166|consen  774 --EYSPYGTLLDLI----------------NTNKVMDEYLVMFFSCQMLRIVEHLHAM  813 (974)
T ss_pred             --eccccccHHHhh----------------ccCCCCCchhhhHHHHHHHHHHHHHHhc
Confidence              777777777633                2344588999999999999999999874

>COG0515 SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]

Probab=98.24  E-value=1.6e-05  Score=57.66  Aligned_cols=116  Identities=29%  Similarity=0.351  Sum_probs=85.2

Q ss_pred             eeecceecccCCeeEEEEEEcCCCEEEEEEeeccCcc---chhHHHHHHHHHhcccccCC-CeeeeecceecCCCcccch
Q 039630           36 FRTSNKIGEGGFGSVYKGRLEDGTVVAVNVLSVESKQ---GETEFMSEVASMANINICHE-NLVKLHGGCIDGPSRILAP  111 (174)
Q Consensus        36 ~~~~~~lg~G~~g~V~~~~~~~~~~~avK~~~~~~~~---~~~~~~~e~~~l~~l~~~h~-~i~~~~~~~~~~~~~~lv~  111 (174)
                      |.....||.|+|+.||.+...  ..+++|.+......   ....+.+|+.++..+.  |+ +++++.+.+......++++
T Consensus         2 ~~~~~~l~~g~~~~v~~~~~~--~~~~~k~~~~~~~~~~~~~~~~~~e~~~~~~~~--~~~~i~~~~~~~~~~~~~~~~~   77 (384)
T COG0515           2 YRILRKLGEGSFGEVYLARDR--KLVALKVLAKKLESKSKEVERFLREIQILASLN--HPPNIVKLYDFFQDEGSLYLVM   77 (384)
T ss_pred             ceeEEeecCCCCeEEEEEEec--cEEEEEeechhhccchhHHHHHHHHHHHHHHcc--CCcceeeEEEEEecCCEEEEEE
Confidence            566788999999999999865  67899999766322   3667899999999998  77 7999999996665556666


Q ss_pred             hhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhcc
Q 039630          112 LQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEI  170 (174)
Q Consensus       112 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  170 (174)
                        ++.....+.. +....           ... ..+.......+..|++.++.|+|+..
T Consensus        78 --~~~~~~~l~~-~~~~~-----------~~~-~~~~~~~~~~~~~~~~~~l~~~H~~~  121 (384)
T COG0515          78 --EYVDGGSLED-LLKKI-----------GRK-GPLSESEALFILAQILSALEYLHSKG  121 (384)
T ss_pred             --ecCCCCcHHH-HHHhc-----------ccc-cCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence              5555555542 21100           000 24778888899999999999999864

>cd05119 RIO RIO kinase family, catalytic domain

Probab=98.12  E-value=1.6e-05  Score=53.84  Aligned_cols=31  Identities=32%  Similarity=0.403  Sum_probs=27.0

Q ss_pred             cceecccCCeeEEEEEEcCCCEEEEEEeecc
Q 039630           39 SNKIGEGGFGSVYKGRLEDGTVVAVNVLSVE   69 (174)
Q Consensus        39 ~~~lg~G~~g~V~~~~~~~~~~~avK~~~~~   69 (174)
                      .+.||+|+||.||++...++..||+|++...
T Consensus         2 ~~~lg~G~~g~Vy~a~~~~~~~vavKv~~~~   32 (187)
T cd05119           2 GGPIGTGKEADVYLALDGDGEPVAVKIYRTG   32 (187)
T ss_pred             CcccccccceeEEEEECCCCCEEEEEEEecC
Confidence            4679999999999999768999999998754

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases present in archaea, bacteria and eukaryotes. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. RIO kinases contain a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. Most organisms contain at least two RIO kinases, RIO1 and RIO2. A third protein, RIO3, is present in multicellular eukaryotes. In yeast, RIO1 and RIO2 are essential for survival. They funct

>KOG3741 consensus Poly(A) ribonuclease subunit [RNA processing and modification]

Probab=98.03  E-value=2.9e-05  Score=59.79  Aligned_cols=121  Identities=15%  Similarity=0.032  Sum_probs=76.1

Q ss_pred             eeEEEEE-EcCCCEEEEEEeeccCccchhHHHHHHHHHhcccccCCCeeeeecceecC--CCcccchhhhhhhhhhhhhh
Q 039630           48 GSVYKGR-LEDGTVVAVNVLSVESKQGETEFMSEVASMANINICHENLVKLHGGCIDG--PSRILAPLQASIEALFLFTK  124 (174)
Q Consensus        48 g~V~~~~-~~~~~~~avK~~~~~~~~~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~~~--~~~~lv~~~~~~~~~~l~~~  124 (174)
                      ...|++. ..+|..+++|++.............-++.++++.  |.|++++.+++.+.  ++..+++.|++.+...-..+
T Consensus       290 ~Ttyk~~s~~DG~~YvLkRlhg~r~~~~nk~t~lve~wkkl~--h~NvV~frevf~t~tF~D~SlvlvYDYyP~s~TL~d  367 (655)
T KOG3741|consen  290 ITTYKATSNVDGNAYVLKRLHGDRDQSTNKDTSLVEAWKKLC--HTNVVPFREVFLTYTFGDLSLVLVYDYYPSSPTLYD  367 (655)
T ss_pred             ceeEeeeeccCCceeeeeeeccccccCcccchHHHHHHHHhc--cCceeehhhhhhhhccCcceEEEEEecCCCCchHHH
Confidence            4567777 5578899999995332222223345567788888  99999999998743  44455555577655544433


Q ss_pred             hhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhcc
Q 039630          125 LWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEI  170 (174)
Q Consensus       125 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  170 (174)
                      +.-.........-..........++..++.++.|+..||.++|+..
T Consensus       368 ~~F~~~~~t~~~n~~~~~~~~~~~e~~lW~y~~QLtaaL~sIHssG  413 (655)
T KOG3741|consen  368 LYFANPPFTKRTNSFYPSQNLKAPEEVLWSYISQLTAALYSIHSSG  413 (655)
T ss_pred             HHccCCccccccccccccCCCCchHHHHHHHHHHHHHHHHHHHhcC
Confidence            3221111110000011223445788999999999999999999853

>cd05154 ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 and 11, N-terminal domain, and similar proteins

Probab=97.96  E-value=6.2e-05  Score=52.21  Aligned_cols=112  Identities=15%  Similarity=0.139  Sum_probs=71.5

Q ss_pred             ceecccCCeeEEEEEEcCCCEEEEEEeeccCc-cchhHHHHHHHHHhcccccCCCeeeeecceecCC---Ccccchhhhh
Q 039630           40 NKIGEGGFGSVYKGRLEDGTVVAVNVLSVESK-QGETEFMSEVASMANINICHENLVKLHGGCIDGP---SRILAPLQAS  115 (174)
Q Consensus        40 ~~lg~G~~g~V~~~~~~~~~~~avK~~~~~~~-~~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~~~~---~~~lv~~~~~  115 (174)
                      +.++.|..+.+|+.+..+|..+++|....... .....+..|..++..+...+.++.+++.......   ..++++  ++
T Consensus         4 ~~l~~G~~n~~~~v~~~~g~~~ilK~~~~~~~~~~~~~~~~E~~~~~~l~~~~~~vp~~~~~~~~~~~~~~~~~v~--e~   81 (223)
T cd05154           4 RQLSGGQSNLTYLLTAGGGRRLVLRRPPPGALLPSAHDVAREYRVLRALAGTGVPVPKVLALCEDPSVLGTPFYVM--ER   81 (223)
T ss_pred             eecCCCccceEEEEEecCCcceEEEeCCCcccCcccccHHHHHHHHHHhhCCCCCCCCEEEECCCCCccCCceEEE--EE
Confidence            57889999999999876667899999864422 2355688899999888611233455555544321   223444  33


Q ss_pred             hhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhcc
Q 039630          116 IEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEI  170 (174)
Q Consensus       116 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  170 (174)
                      .++..+....                 ....++......++.+++..|..||+..
T Consensus        82 i~G~~l~~~~-----------------~~~~~~~~~~~~i~~~i~~~l~~lH~~~  119 (223)
T cd05154          82 VDGRVLRDRL-----------------LRPELSPEERRALARALADTLAALHSVD  119 (223)
T ss_pred             eCCEecCCCC-----------------CCCCCCHHHHHHHHHHHHHHHHHHhCCC
Confidence            3333222100                 0023566777889999999999999854

This subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of bacterial and eukaryotic proteins with similarity to the N-terminal domains of vertebrate ACAD10 and ACAD11. ACADs are a family of flavoproteins that are involved in the beta-oxidation of fatty acyl-CoA derivatives. ACAD deficiency can cause metabolic disorders including muscle fatigue, hypoglycemia, and hepatic lipidosis, among them. There are at least 11 distinct ACADs, some of which show distinct substrate specificities to either straight-chain or branched-chain fatty acids. ACAD10 is widely expressed in human tissues and is highly expressed in liver, kidney, pancreas, and spleen. ACAD10 and ACAD11 contain

>KOG0665 consensus Jun-N-terminal kinase (JNK) [Signal transduction mechanisms]

Probab=97.90  E-value=3.6e-05  Score=55.72  Aligned_cols=119  Identities=18%  Similarity=0.210  Sum_probs=79.0

Q ss_pred             CCeeecceecccCCeeEEEEE-EcCCCEEEEEEeecc--CccchhHHHHHHHHHhcccccCCCeeeeecceecCCCcccc
Q 039630           34 NGFRTSNKIGEGGFGSVYKGR-LEDGTVVAVNVLSVE--SKQGETEFMSEVASMANINICHENLVKLHGGCIDGPSRILA  110 (174)
Q Consensus        34 ~~~~~~~~lg~G~~g~V~~~~-~~~~~~~avK~~~~~--~~~~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~~~~~~~lv  110 (174)
                      .+|..+..+|.|+= .|..+. .-.+++|++|.+...  ......+..+|..++..+.  |+|+++++.++......   
T Consensus        17 ~Ry~nL~p~~~g~~-~v~~a~D~v~~~~v~ikk~~~pf~n~~~akra~rel~l~~~v~--~~nii~l~n~ftP~~~l---   90 (369)
T KOG0665|consen   17 KRYVNLKPIGSGAQ-IVVAAFDQVLGRPVAIKKLSRPFQNQTHAKRAYRELKLMKCVN--HKNIISLLNVFTPQKTL---   90 (369)
T ss_pred             eeeeeecccCCCCc-eEEecchhhccCceehhhhcCccccCccchhhhhhhhhhhhhc--ccceeeeeeccCccccH---
Confidence            45777778888776 455444 224778888887544  3445667889999999999  99999999999665432   


Q ss_pred             hhhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhcc
Q 039630          111 PLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEI  170 (174)
Q Consensus       111 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  170 (174)
                         +-.....++++++.........         -.++=..+..+.+|++.|+.|||+.+
T Consensus        91 ---~~~~e~y~v~e~m~~nl~~vi~---------~elDH~tis~i~yq~~~~ik~lhs~~  138 (369)
T KOG0665|consen   91 ---EEFQEVYLVMELMDANLCQVIL---------MELDHETISYILYQMLCGIKHLHSAG  138 (369)
T ss_pred             ---HHHHhHHHHHHhhhhHHHHHHH---------HhcchHHHHHHHHHHHHHHHHHHhcc
Confidence               2223344555554432221110         12344566789999999999999864

>KOG1243 consensus Protein kinase [General function prediction only]

Probab=97.66  E-value=0.00019  Score=56.84  Aligned_cols=92  Identities=14%  Similarity=0.118  Sum_probs=68.2

Q ss_pred             EcCCCEEEEEEeeccCccchhHHHHHHHHHhcccccCCCeeeeecceecCCCcccchhhhhhhhhhhhhhhhcccceeee
Q 039630           55 LEDGTVVAVNVLSVESKQGETEFMSEVASMANINICHENLVKLHGGCIDGPSRILAPLQASIEALFLFTKLWKMDKFISI  134 (174)
Q Consensus        55 ~~~~~~~avK~~~~~~~~~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~~~~~~~lv~~~~~~~~~~l~~~~~~~~~~~~~  134 (174)
                      ..++.+|.|...+.++........+.+.-|+.++  ||+|+++++.....+..|+|.  +..........-         
T Consensus        34 k~~~~~vsVF~~~~~~~~~~~~~~~A~k~lKtlR--HP~Il~yL~t~e~~~~~ylvT--ErV~Pl~~~lk~---------  100 (690)
T KOG1243|consen   34 KADGGPVSVFVYKRSNGEVTELAKRAVKRLKTLR--HPNILSYLDTTEEEGTLYLVT--ERVRPLETVLKE---------  100 (690)
T ss_pred             eccCCceEEEEEeCCCchhhHHHHHHHHHhhhcc--CchhhhhhhhhcccCceEEEe--eccccHHHHHHH---------
Confidence            5578899999998665533445667778899999  999999999999999889988  554444433311         


Q ss_pred             eeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhccC
Q 039630          135 YVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEIK  171 (174)
Q Consensus       135 ~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~~  171 (174)
                                  +......-.+.||+.||.|||++++
T Consensus       101 ------------l~~~~v~~Gl~qIl~AL~FL~~d~~  125 (690)
T KOG1243|consen  101 ------------LGKEEVCLGLFQILAALSFLNDDCN  125 (690)
T ss_pred             ------------hHHHHHHHHHHHHHHHHHHHhccCC
Confidence                        2244455578899999999997664

>TIGR01982 UbiB 2-polyprenylphenol 6-hydroxylase

Probab=97.29  E-value=0.00056  Score=52.79  Aligned_cols=30  Identities=33%  Similarity=0.461  Sum_probs=27.1

Q ss_pred             ceecccCCeeEEEEEEcCCCEEEEEEeecc
Q 039630           40 NKIGEGGFGSVYKGRLEDGTVVAVNVLSVE   69 (174)
Q Consensus        40 ~~lg~G~~g~V~~~~~~~~~~~avK~~~~~   69 (174)
                      +.||.|++|.||+|+.++|+.||||+.+..
T Consensus       123 ~plasaSigQVh~A~l~~G~~VaVKv~rp~  152 (437)
T TIGR01982       123 KPLAAASIAQVHRARLVDGKEVAVKVLRPG  152 (437)
T ss_pred             cceeeeehhheEEEEecCCCEEEEEeeCCC
Confidence            679999999999999889999999998643

This model represents the enzyme (UbiB) which catalyzes the first hydroxylation step in the ubiquinone biosynthetic pathway in bacteria. It is believed that the reaction is 2-polyprenylphenol - 6-hydroxy-2-polyprenylphenol. This model finds hits primarily in the proteobacteria. The gene is also known as AarF in certain species.

>PRK04750 ubiB putative ubiquinone biosynthesis protein UbiB; Reviewed

Probab=97.26  E-value=7.3e-05  Score=58.73  Aligned_cols=34  Identities=29%  Similarity=0.450  Sum_probs=28.8

Q ss_pred             CeeecceecccCCeeEEEEEEcC-CCEEEEEEeecc
Q 039630           35 GFRTSNKIGEGGFGSVYKGRLED-GTVVAVNVLSVE   69 (174)
Q Consensus        35 ~~~~~~~lg~G~~g~V~~~~~~~-~~~~avK~~~~~   69 (174)
                      +|.. +.||+|++|.||+|..++ |+.||||+++..
T Consensus       121 ~fd~-~PlasaSiaQVh~A~l~~~G~~VAVKV~rP~  155 (537)
T PRK04750        121 DFDI-KPLASASIAQVHFARLKDNGREVVVKVLRPD  155 (537)
T ss_pred             hcCh-hhhcCCCccEEEEEEECCCCCEEEEEEeCcc
Confidence            4555 789999999999999766 999999999743

>PRK01723 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed

Probab=97.04  E-value=0.0054  Score=43.51  Aligned_cols=105  Identities=14%  Similarity=0.091  Sum_probs=59.2

Q ss_pred             ceec-ccCCeeEEEEEEcCCCEEEEEEeeccC-------------ccchhHHHHHHHHHhcccccCCCe--eeeecceec
Q 039630           40 NKIG-EGGFGSVYKGRLEDGTVVAVNVLSVES-------------KQGETEFMSEVASMANINICHENL--VKLHGGCID  103 (174)
Q Consensus        40 ~~lg-~G~~g~V~~~~~~~~~~~avK~~~~~~-------------~~~~~~~~~e~~~l~~l~~~h~~i--~~~~~~~~~  103 (174)
                      ..|| .|+.|.||..... +..+++|......             ......+.+|+.++..+.  ++++  +..++....
T Consensus        37 ~~lg~~~g~gtv~~v~~~-~~~~vlk~~~r~~~i~kv~~~~~~~~~~~~~r~~rE~~ll~~L~--~~gi~vP~pl~~~~~  113 (239)
T PRK01723         37 RVVGSAKGRGTTWFVQTP-GVNWVLRHYRRGGLIGKLSKDRYLFTGLERTRAFAEFRLLAQLY--EAGLPVPRPIAARVV  113 (239)
T ss_pred             ceeecCCCCccEEEEEeC-CceEEEEEeeEcchHHhhhhhcccccchhhhHHHHHHHHHHHHH--hCCCCCceeEeeeee
Confidence            3455 5666777766654 6678888775321             122346788999999998  7664  555555433


Q ss_pred             CCC----cccchhhhhhhhh-hhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhcc
Q 039630          104 GPS----RILAPLQASIEAL-FLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEI  170 (174)
Q Consensus       104 ~~~----~~lv~~~~~~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  170 (174)
                      ...    .++++  ++.++. .+.. +..                ...++..    .+.|++.++.+||++.
T Consensus       114 ~~~~~~~~~lV~--e~l~G~~~L~~-~l~----------------~~~l~~~----~~~~i~~~l~~lH~~G  162 (239)
T PRK01723        114 RHGLFYRADILI--ERIEGARDLVA-LLQ----------------EAPLSEE----QWQAIGQLIARFHDAG  162 (239)
T ss_pred             ecCcceeeeEEE--EecCCCCCHHH-HHh----------------cCCCCHH----HHHHHHHHHHHHHHCC
Confidence            221    12444  444432 2222 111                0123332    3578999999999864

>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]

Probab=96.81  E-value=0.00086  Score=52.70  Aligned_cols=110  Identities=25%  Similarity=0.277  Sum_probs=78.1

Q ss_pred             eecccCCeeEEEEE----EcCCCEEEEEEeeccCcc--chhHHHHHHHHHhcccccCCCeeeeecceecCCCcccchhhh
Q 039630           41 KIGEGGFGSVYKGR----LEDGTVVAVNVLSVESKQ--GETEFMSEVASMANINICHENLVKLHGGCIDGPSRILAPLQA  114 (174)
Q Consensus        41 ~lg~G~~g~V~~~~----~~~~~~~avK~~~~~~~~--~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~~~~~~~lv~~~~  114 (174)
                      ++|+|+||.|+.+.    ...|..+++|+.+..+..  .......|..++...+ .|+.++++.-.+..+...+++.  +
T Consensus         1 vlg~g~~gkvfLvrk~~g~da~~~yamkvl~k~t~~~~~~~~t~~er~il~~~~-~~~f~v~lhyafqt~~kl~l~l--d   77 (612)
T KOG0603|consen    1 VLGQGSYGKVFLVRKAGGADAGHLYAMKVLKKATLKVRDRTHTKQERIILAFVH-NTPFLVKLHYAFQTDGKLYLIL--D   77 (612)
T ss_pred             CCCcCCCcchHHHHHhccccccchhhhhcccccccccccccccccHHHHHhhcc-CCCceeeeeeeeccccchhHhh--h
Confidence            37899999998766    234677888888755321  1223445666666665 5899999999999998888888  7


Q ss_pred             hhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhc
Q 039630          115 SIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEE  169 (174)
Q Consensus       115 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~  169 (174)
                      +..++.++..+                .....+.+.....+...++.+++++|..
T Consensus        78 ~~rgg~lft~l----------------~~~~~f~~~~~~~~~aelaLald~lh~l  116 (612)
T KOG0603|consen   78 FLRGGDLFTRL----------------SKEVMFDELDVAFYLAELALALDHLHKL  116 (612)
T ss_pred             hcccchhhhcc----------------ccCCchHHHHHHHHHHHHHHHHhhcchh
Confidence            77777777633                2223355666667778889999999874

>cd05151 ChoK Choline Kinase (ChoK)

Probab=96.80  E-value=0.0042  Score=41.16  Aligned_cols=100  Identities=17%  Similarity=0.062  Sum_probs=59.1

Q ss_pred             cceecccCCeeEEEEEEcCCCEEEEEEeeccCccchhHHHHHHHHHhcccccCCCe-eeeecceecCCCcccchhhhhhh
Q 039630           39 SNKIGEGGFGSVYKGRLEDGTVVAVNVLSVESKQGETEFMSEVASMANINICHENL-VKLHGGCIDGPSRILAPLQASIE  117 (174)
Q Consensus        39 ~~~lg~G~~g~V~~~~~~~~~~~avK~~~~~~~~~~~~~~~e~~~l~~l~~~h~~i-~~~~~~~~~~~~~~lv~~~~~~~  117 (174)
                      ++.++.|.++.||++... +..+++|+...... ....+..|+.++..+.  ..++ .+++...  .+..++++  ++.+
T Consensus         3 ~~~l~~G~~~~vy~~~~~-~~~~~lK~~~~~~~-~~~~~~~E~~~l~~l~--~~~~~P~~~~~~--~~~~~lv~--e~i~   74 (170)
T cd05151           3 ISPLKGGMTNKNYRVEVA-NKKYVVRIPGNGTE-LLINRENEAENSKLAA--EAGIGPKLYYFD--PETGVLIT--EFIE   74 (170)
T ss_pred             eeecCCcccCceEEEEEC-CeEEEEEeCCCCcc-cccCHHHHHHHHHHHH--HhCCCCceEEEe--CCCCeEEE--EecC
Confidence            357889999999998865 67899998754321 2234678888888876  4333 3344332  22233444  4333


Q ss_pred             hhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhcc
Q 039630          118 ALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEI  170 (174)
Q Consensus       118 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  170 (174)
                      +..+..          .           ...   ....+.+++.+|+.||+..
T Consensus        75 G~~l~~----------~-----------~~~---~~~~~~~l~~~l~~LH~~~  103 (170)
T cd05151          75 GSELLT----------E-----------DFS---DPENLEKIAKLLKKLHSSP  103 (170)
T ss_pred             CCcccc----------c-----------ccc---CHHHHHHHHHHHHHHhCCC
Confidence            332211          0           011   1235678999999999865

The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC), and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. Bacterial ChoK is also referred to as licA protein. ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major ph

>PF03109 ABC1: ABC1 family; InterPro: IPR004147 This entry includes ABC1 from yeast [] and AarF from Escherichia coli []

Probab=96.59  E-value=0.00096  Score=42.01  Aligned_cols=45  Identities=22%  Similarity=0.358  Sum_probs=35.1

Q ss_pred             ceecccCCeeEEEEEEcCCCEEEEEEeeccCccchhHHHHHHHHHhcc
Q 039630           40 NKIGEGGFGSVYKGRLEDGTVVAVNVLSVESKQGETEFMSEVASMANI   87 (174)
Q Consensus        40 ~~lg~G~~g~V~~~~~~~~~~~avK~~~~~~~~~~~~~~~e~~~l~~l   87 (174)
                      ..|+.|+.|.||+|++++|+.||||+..   +.....+...+.+++.+
T Consensus        17 ~PlasASiaQVh~a~l~~g~~VaVKV~r---P~i~~~i~~Dl~~l~~~   61 (119)
T PF03109_consen   17 EPLASASIAQVHRARLKDGEEVAVKVQR---PGIEEQIEADLRILRRL   61 (119)
T ss_pred             chhhheehhhheeeeecccchhhhhhcc---hHHHHHHHHHHHHHHHH
Confidence            6899999999999999889999999987   44444555556555543

These proteins have a nuclear or mitochondrial subcellular location in eukaryotes. The exact molecular functions of these proteins is not clear, however yeast ABC1 suppresses a cytochrome b mRNA translation defect and is essential for the electron transfer in the bc 1 complex [] and E. coli AarF is required for ubiquinone production []. It has been suggested that members of the ABC1 family are novel chaperonins []. These proteins are unrelated to the ABC transporter proteins.

>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]

Probab=96.44  E-value=0.0022  Score=51.42  Aligned_cols=114  Identities=17%  Similarity=0.188  Sum_probs=67.1

Q ss_pred             eecceecccCCeeEEEEE-EcCCCEEEEEEee-----ccC-ccchhHHHHHHHHHhcccccCCCeeeeecceecCCCccc
Q 039630           37 RTSNKIGEGGFGSVYKGR-LEDGTVVAVNVLS-----VES-KQGETEFMSEVASMANINICHENLVKLHGGCIDGPSRIL  109 (174)
Q Consensus        37 ~~~~~lg~G~~g~V~~~~-~~~~~~~avK~~~-----~~~-~~~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~~~~~~~l  109 (174)
                      ....++|.|++|.|+... ......++.|...     ... .+....+..|..+-..+.  |+|++.....+........
T Consensus       321 ~~~~~~g~ga~g~~~~~~~~~~~~~~~~~~~r~~~~~~~s~~~~~~~i~sE~~i~~~l~--h~~~~e~l~~~~~~~~~~~  398 (601)
T KOG0590|consen  321 KPGRVLGSGAYGSVRIAKRRSDLKSFPEKEFRVRVKPTESERKYNYNITSEFCIGSSLS--HPNIIETLDIVQEIDGILQ  398 (601)
T ss_pred             CccceeeecccCceEEEEecCCCccchhhhhhcccCCcccHHHHhhhhhhheeeccccc--CCchhhhHHHHhhcccchh
Confidence            456789999999777666 2223323333221     111 112223666777777788  9998877766655433322


Q ss_pred             chhhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhccC
Q 039630          110 APLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEIK  171 (174)
Q Consensus       110 v~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~~  171 (174)
                      .+  ++.+. .++....                ....+....+-.+..|++.|+.|+|+.+-
T Consensus       399 ~m--E~~~~-Dlf~~~~----------------~~~~~~~~e~~c~fKqL~~Gv~y~h~~Gi  441 (601)
T KOG0590|consen  399 SM--EYCPY-DLFSLVM----------------SNGKLTPLEADCFFKQLLRGVKYLHSMGL  441 (601)
T ss_pred             hh--hcccH-HHHHHHh----------------cccccchhhhhHHHHHHHHHHHHHHhcCc
Confidence            22  44444 3333221                11245666777799999999999999763

>KOG1023 consensus Natriuretic peptide receptor, guanylate cyclase [Signal transduction mechanisms]

Probab=96.44  E-value=0.0026  Score=49.39  Aligned_cols=65  Identities=28%  Similarity=0.484  Sum_probs=48.6

Q ss_pred             hcccccCCCeeeeecceecCCCcccchhhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHH
Q 039630           85 ANINICHENLVKLHGGCIDGPSRILAPLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLA  164 (174)
Q Consensus        85 ~~l~~~h~~i~~~~~~~~~~~~~~lv~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~  164 (174)
                      +.+.  |.|+.+++|.+..++..+.+.  ++...+.+..-+               ......+++.-...+.++++.||+
T Consensus         2 ~~l~--h~n~~~f~g~~~~~~~~~~i~--~~c~rGsl~D~i---------------~~~~~~~d~~F~~s~~rdi~~Gl~   62 (484)
T KOG1023|consen    2 RQLD--HDNLNKFIGASVDGPEMIVIW--EYCSRGSLLDIL---------------SNEDIKLDYFFILSFIRDISKGLA   62 (484)
T ss_pred             cccc--hhhhhhheeeEecCCceEEEE--eeecCccHHhHH---------------hccccCccHHHHHHHHHHHHHHHH
Confidence            3455  999999999999987766666  555555555422               112345788888899999999999


Q ss_pred             Hhhh
Q 039630          165 YIHE  168 (174)
Q Consensus       165 yLH~  168 (174)
                      |||+
T Consensus        63 ylh~   66 (484)
T KOG1023|consen   63 YLHN   66 (484)
T ss_pred             HHhc
Confidence            9997

>KOG1240 consensus Protein kinase containing WD40 repeats [Signal transduction mechanisms]

Probab=95.69  E-value=0.031  Score=47.57  Aligned_cols=114  Identities=15%  Similarity=0.189  Sum_probs=73.1

Q ss_pred             CeeecceecccCCeeEEEEEEcCCCEEEEEEeeccC-ccchhHHHHHHHHHh--cccccCCCeeeeecceecCCCcccch
Q 039630           35 GFRTSNKIGEGGFGSVYKGRLEDGTVVAVNVLSVES-KQGETEFMSEVASMA--NINICHENLVKLHGGCIDGPSRILAP  111 (174)
Q Consensus        35 ~~~~~~~lg~G~~g~V~~~~~~~~~~~avK~~~~~~-~~~~~~~~~e~~~l~--~l~~~h~~i~~~~~~~~~~~~~~lv~  111 (174)
                      ++...+.||++.|=+|.+|.-+.|. |+||++-... .-.-..+.+++.-.+  ..+  +||++.+.-+-....-     
T Consensus        24 e~~~~~~LGstRFlKv~r~k~~eG~-vVvKVFvk~~p~~sL~~~~qrL~~ik~~l~~--~pn~lPfqk~~~t~kA-----   95 (1431)
T KOG1240|consen   24 ECHYVENLGSTRFLKVARAKDREGL-VVVKVFVKQDPTISLRPFKQRLEEIKFALMK--APNCLPFQKVLVTDKA-----   95 (1431)
T ss_pred             ceeeecccCchhhhhhhhccCCCce-EEEEEEeccCCCCCchHHHHHHHHHHHHhhc--CCcccchHHHHHhhHH-----
Confidence            6777899999999999999876676 8899886553 222333444433332  334  9999988776544432     


Q ss_pred             hhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhcc
Q 039630          112 LQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEI  170 (174)
Q Consensus       112 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  170 (174)
                             .+++..+...       .+.++...+..+......-|+.|++.|+.-+|...
T Consensus        96 -------AylvRqyvkh-------nLyDRlSTRPFL~~iEKkWiaFQLL~al~qcH~~g  140 (1431)
T KOG1240|consen   96 -------AYLVRQYVKH-------NLYDRLSTRPFLVLIEKKWIAFQLLKALSQCHKLG  140 (1431)
T ss_pred             -------HHHHHHHHhh-------hhhhhhccchHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence                   3444444332       22223344444566666668999999999998753

>PLN02876 acyl-CoA dehydrogenase

Probab=95.60  E-value=0.11  Score=43.59  Aligned_cols=111  Identities=15%  Similarity=0.156  Sum_probs=67.4

Q ss_pred             ecceecccCCeeEEEEEEcCC---CEEEEEEeeccC-ccchhHHHHHHHHHhcccccCCC--eeeeecceecC---CCcc
Q 039630           38 TSNKIGEGGFGSVYKGRLEDG---TVVAVNVLSVES-KQGETEFMSEVASMANINICHEN--LVKLHGGCIDG---PSRI  108 (174)
Q Consensus        38 ~~~~lg~G~~g~V~~~~~~~~---~~~avK~~~~~~-~~~~~~~~~e~~~l~~l~~~h~~--i~~~~~~~~~~---~~~~  108 (174)
                      ....++.|.+..+|.....++   ..+++|..+... ......+.+|..+++.+. .|.+  +.+++..+.+.   +..+
T Consensus        42 ~v~~l~gG~sn~ty~l~~~~~~~~~~~VLR~~p~~~~~~~~~~~~rE~~~l~~L~-~~~~vpVP~v~~~~~d~~v~G~~f  120 (822)
T PLN02876         42 KVSQFGHGQSNPTFLLEVGNGGSVKRYVLRKKPPGKLLQSAHAVEREYQVLRALG-EHTDVPVPKVYCLCTDASVIGTAF  120 (822)
T ss_pred             eEEEeCCCCcCceEEEEECCCCcceeEEEEeCCCCccCccHHHHHHHHHHHHHHh-hcCCCCCCcEEEEecCCCcCCCce
Confidence            357788999999998775543   356677654322 223456889999998874 2344  46666666543   2334


Q ss_pred             cchhhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhc
Q 039630          109 LAPLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEE  169 (174)
Q Consensus       109 lv~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~  169 (174)
                      +||  ++.++-.+..                  .....++......++.++++.|+.||+-
T Consensus       121 lVM--E~v~G~~~~~------------------~~~~~~~~~~r~~l~~~l~~~La~LH~v  161 (822)
T PLN02876        121 YIM--EYLEGRIFVD------------------PKLPGVAPERRRAIYRATAKVLAALHSA  161 (822)
T ss_pred             EEE--EecCCcccCC------------------ccCCCCCHHHHHHHHHHHHHHHHHHhCC
Confidence            444  4333321110                  0011234556677899999999999984

>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]

Probab=95.56  E-value=0.016  Score=45.41  Aligned_cols=118  Identities=19%  Similarity=0.114  Sum_probs=74.1

Q ss_pred             cCCeeecceecccCCeeEEEEEE--cCCCEEEEEEeeccCccchhH--HHHHHHHHhcccccCCCeeeeecceecCCCcc
Q 039630           33 TNGFRTSNKIGEGGFGSVYKGRL--EDGTVVAVNVLSVESKQGETE--FMSEVASMANINICHENLVKLHGGCIDGPSRI  108 (174)
Q Consensus        33 ~~~~~~~~~lg~G~~g~V~~~~~--~~~~~~avK~~~~~~~~~~~~--~~~e~~~l~~l~~~h~~i~~~~~~~~~~~~~~  108 (174)
                      ..++..+..||.|.|+.++.+..  .++..+++|.+.........+  -..|+.+...+. .|.+++.....+......+
T Consensus       264 ~~df~~v~~i~~~~~~~~~~~~~r~~~~~~Y~~ke~~~~l~~~~~di~sl~ev~l~~~l~-~~~~~~g~~~~W~~~r~~~  342 (524)
T KOG0601|consen  264 LTDFGLVSKISDGNFSSVFKVSKRPEGDCIYAAKELLNGLATFASDIFSLGEVILEAILG-SHLPSVGKNSSWSQLRQGY  342 (524)
T ss_pred             cCCcceeEEccCCccccceeeeecCCCCceEeChhhhccccchHhhhcchhhhhHhhHhh-cccccCCCCCCcccccccc
Confidence            35678889999999999998773  467889999887553222222  344555555554 4777777766665544433


Q ss_pred             cchhhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhc
Q 039630          109 LAPLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEE  169 (174)
Q Consensus       109 lv~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~  169 (174)
                      +-.  ++++++......                ....-+.+...+.+..|++.++.++|+.
T Consensus       343 ip~--e~~~~~s~~l~~----------------~~~~~~d~~~~~~~~~q~~~~l~~i~s~  385 (524)
T KOG0601|consen  343 IPL--EFCEGGSSSLRS----------------VTSQMLDEDPRLRLTAQILTALNVIHSK  385 (524)
T ss_pred             Cch--hhhcCcchhhhh----------------HHHHhcCcchhhhhHHHHHhccccccch
Confidence            322  333333322211                1112356677788899999999999864

>cd05146 RIO3_euk RIO kinase family; eukaryotic RIO3, catalytic domain

Probab=95.25  E-value=0.2  Score=34.48  Aligned_cols=107  Identities=11%  Similarity=-0.000  Sum_probs=61.6

Q ss_pred             ceecccCCeeEEEEEEcC-------CCEEEEEEeeccCc-----------c----------c-hh----HHHHHHHHHhc
Q 039630           40 NKIGEGGFGSVYKGRLED-------GTVVAVNVLSVESK-----------Q----------G-ET----EFMSEVASMAN   86 (174)
Q Consensus        40 ~~lg~G~~g~V~~~~~~~-------~~~~avK~~~~~~~-----------~----------~-~~----~~~~e~~~l~~   86 (174)
                      ..||.|.=+.||.|...+       +..+|+|+.+....           +          . ..    ...+|...|.+
T Consensus         3 g~i~~GKEa~V~~~~~~~~~~~~~~~~~~avKi~r~~~~~Fk~~~~y~~~~~rf~~~~~k~~~~~~~~~wa~kE~r~L~r   82 (197)
T cd05146           3 GCISTGKESVVLHANGGSNETEQVIPTECAIKVFKTTLNEFKNRDKYIKDDYRFKDRFSKLNPRKIIRMWAEKEMHNLKR   82 (197)
T ss_pred             CccccCcceEEEEEecCcccccccCCceEEEEEEeccceeEcChhhhccCCcccccCcCCCCHHHHHHHHHHHHHHHHHH
Confidence            578999999999998442       47899999864310           0          0 11    13478888888


Q ss_pred             ccccCCCeeeeecceecCCCcccchhhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHh
Q 039630           87 INICHENLVKLHGGCIDGPSRILAPLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYI  166 (174)
Q Consensus        87 l~~~h~~i~~~~~~~~~~~~~~lv~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yL  166 (174)
                      +....-++..++..    ...+++|  ++.+...+....                .....++......+..+++.+|..|
T Consensus        83 l~~~Gv~vP~pi~~----~~~~lvM--E~Ig~~~~~~~~----------------Lkd~~~~~~~~~~i~~~i~~~l~~l  140 (197)
T cd05146          83 MQKAGIPCPEVVVL----KKHVLVM--SFIGDDQVPAPK----------------LKDAKLNDEEMKNAYYQVLSMMKQL  140 (197)
T ss_pred             HHHcCCCCCeEEEe----cCCEEEE--EEcCCCCccchh----------------hhccccCHHHHHHHHHHHHHHHHHH
Confidence            75223455565543    3344555  444332111100                0011233344556778999999888


Q ss_pred             -hh
Q 039630          167 -HE  168 (174)
Q Consensus       167 -H~  168 (174)
                       |.
T Consensus       141 ~H~  143 (197)
T cd05146         141 YKE  143 (197)
T ss_pred             HHh
Confidence             54

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO3 is present only in multicellular eukaryotes. Its function is still unknown.

>PLN00181 protein SPA1-RELATED; Provisional

Probab=95.12  E-value=0.015  Score=48.40  Aligned_cols=25  Identities=8%  Similarity=-0.073  Sum_probs=22.5

Q ss_pred             cCCHHHHHHHHHHHHHHHHHhhhcc
Q 039630          146 KFNWIARREIALGIARGLAYIHEEI  170 (174)
Q Consensus       146 ~~~~~~~~~~~~qi~~gl~yLH~~~  170 (174)
                      .+++..++.++.||+.||+|||++.
T Consensus        76 ~~~~~~~~~i~~qi~~al~~lH~~g  100 (793)
T PLN00181         76 SVDAFECFHVFRQIVEIVNAAHSQG  100 (793)
T ss_pred             cccHHHHHHHHHHHHHHHHHHHhCC
Confidence            4788999999999999999999864

>PF01636 APH: Phosphotransferase enzyme family This family is part of the larger protein kinase superfamily

Probab=94.63  E-value=0.3  Score=33.80  Aligned_cols=105  Identities=14%  Similarity=0.072  Sum_probs=62.8

Q ss_pred             cceecccCCeeEEEEEEcCCCEEEEEEeeccCccchhHHHHHHHHHhcccccCCCeeeeecceecCCC---cccchhhhh
Q 039630           39 SNKIGEGGFGSVYKGRLEDGTVVAVNVLSVESKQGETEFMSEVASMANINICHENLVKLHGGCIDGPS---RILAPLQAS  115 (174)
Q Consensus        39 ~~~lg~G~~g~V~~~~~~~~~~~avK~~~~~~~~~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~~~~~---~~lv~~~~~  115 (174)
                      ++.++.|..+.+|.....+ ..+++|.....  .....+..|..++..+......+..++........   .++++  ++
T Consensus         2 i~~l~~G~~n~~~~v~~~~-~~~vlK~~~~~--~~~~~~~~e~~~~~~l~~~~~pvP~~~~~~~~~~~~~~~~~~~--~~   76 (239)
T PF01636_consen    2 IRPLSGGFSNRVYRVTTDD-GRYVLKFYRPP--DAAERLRREAAVLRQLAEHGIPVPRVLAFDTSDEFNGFPYLLM--EY   76 (239)
T ss_dssp             EEEEEESSSSEEEEEEETT-SEEEEEEESSH--HHHHHHHHHHHHHHHHHHTTSBS--EEEEEEETEETSEEEEEE--EE
T ss_pred             CccCCCCCeeeEEEEEECC-cEEEEEEeCCC--CCHHHHHHHHHHHHHHHhcCCCCceEEeecccccccccceEEE--EE
Confidence            3678899999999998765 58899987533  34556778888887775111234455543322211   12222  22


Q ss_pred             hhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhcc
Q 039630          116 IEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEI  170 (174)
Q Consensus       116 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  170 (174)
                      .++..+..                      ..+......++.+++..+.-||+..
T Consensus        77 i~g~~~~~----------------------~~~~~~~~~~~~~~~~~l~~lh~~~  109 (239)
T PF01636_consen   77 IPGRPLDD----------------------ELSPEQRPELLRQLGRALAQLHQVP  109 (239)
T ss_dssp             ESSEEHHH----------------------TSTHHHHHHHHHHHHHHHHHHHHSH
T ss_pred             eccccccc----------------------cccccccccccccchhhhhhccccc
Confidence            22221111                      2355667778899999999999864

; InterPro: IPR002575 This entry consists of bacterial antibiotic resistance proteins, which confer resistance to various aminoglycosides they include:- aminoglycoside 3'-phosphotransferase or kanamycin kinase / neomycin-kanamycin phosphotransferase and streptomycin 3''-kinase or streptomycin 3''-phosphotransferase. The aminoglycoside phosphotransferases inactivate aminoglycoside antibiotics via phosphorylation []. The proteins are found in a range of taxonomic groups.; PDB: 2PPQ_A 2Q83_B 3TDV_B 3TDW_A 3I0O_A 3I0Q_A 3I1A_B 3Q2M_A 3HAV_C 2PUI_B ....

>KOG1266 consensus Protein kinase [Signal transduction mechanisms]

Probab=94.24  E-value=0.012  Score=43.43  Aligned_cols=71  Identities=24%  Similarity=0.172  Sum_probs=46.6

Q ss_pred             CCCeeeeecceecCCC---cccchhhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhh
Q 039630           91 HENLVKLHGGCIDGPS---RILAPLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIH  167 (174)
Q Consensus        91 h~~i~~~~~~~~~~~~---~~lv~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH  167 (174)
                      |.|+++++.++.+...   .-.+|.-+++..+.+-..+-..            ......+......+++-||..||.|||
T Consensus       126 HsnlvkfH~yw~d~K~~e~~rviFiteymssgs~~~fLkrt------------~~~~~a~~~~~wkkw~tqIlsal~yLh  193 (458)
T KOG1266|consen  126 HSNLVKFHKYWTDKKYEEKPRVIFITEYMSSGSLKQFLKRT------------KKNQKALFQKAWKKWCTQILSALSYLH  193 (458)
T ss_pred             HHHHHHHHHhhcccccccccceEEEEecccchhHHHHHHHH------------HHhhhhhhHHHHHHHHHHHHhhhhhhh
Confidence            8999999888765422   2222222666666665544221            122234666777889999999999999


Q ss_pred             hccCCC
Q 039630          168 EEIKTT  173 (174)
Q Consensus       168 ~~~~~~  173 (174)
                      +.-||.
T Consensus       194 s~~Ppi  199 (458)
T KOG1266|consen  194 SCDPPI  199 (458)
T ss_pred             ccCCcc
Confidence            998874

>COG0661 AarF Predicted unusual protein kinase [General function prediction only]

Probab=94.13  E-value=0.068  Score=42.27  Aligned_cols=30  Identities=27%  Similarity=0.327  Sum_probs=27.1

Q ss_pred             ceecccCCeeEEEEEEcCCCEEEEEEeecc
Q 039630           40 NKIGEGGFGSVYKGRLEDGTVVAVNVLSVE   69 (174)
Q Consensus        40 ~~lg~G~~g~V~~~~~~~~~~~avK~~~~~   69 (174)
                      +.++.++-|.||+|++++|+.||||+....
T Consensus       131 ~PiAsASIaQVH~A~L~sG~~VAVKVqrPg  160 (517)
T COG0661         131 EPIASASIAQVHRAVLKSGEEVAVKVQRPG  160 (517)
T ss_pred             CchhhhhHhhheeEEecCCCEEEEEecCCC
Confidence            688999999999999999999999998743

>PF14531 Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_A 3Q5Z_A 3Q60_A

Probab=94.06  E-value=0.15  Score=37.24  Aligned_cols=35  Identities=31%  Similarity=0.528  Sum_probs=29.8

Q ss_pred             CeeecceecccCCeeEEEEE-EcCCCEEEEEEeecc
Q 039630           35 GFRTSNKIGEGGFGSVYKGR-LEDGTVVAVNVLSVE   69 (174)
Q Consensus        35 ~~~~~~~lg~G~~g~V~~~~-~~~~~~~avK~~~~~   69 (174)
                      .+...+.||.|.++.||.++ ..+++.+|+|+....
T Consensus        13 ~l~~~~~i~~g~~~~v~~v~d~~t~~~~avkvf~~~   48 (288)
T PF14531_consen   13 TLVRGRIIGKGGFSIVFEVTDVETGEEFAVKVFLLP   48 (288)
T ss_dssp             EEEEEEEEEEETTEEEEEEEETTTTEEEEEEEEEES
T ss_pred             EEEEccccccCCceEEEEEEEccCCceEEEEEEecc
Confidence            46677899999999999999 556899999998654

>COG2112 Predicted Ser/Thr protein kinase [Signal transduction mechanisms]

Probab=93.69  E-value=0.16  Score=34.49  Aligned_cols=51  Identities=20%  Similarity=0.319  Sum_probs=39.3

Q ss_pred             CeeecceecccCCeeEEEEEEcCCCEEEEEEeeccCccchhHHHHHHHHHhccc
Q 039630           35 GFRTSNKIGEGGFGSVYKGRLEDGTVVAVNVLSVESKQGETEFMSEVASMANIN   88 (174)
Q Consensus        35 ~~~~~~~lg~G~~g~V~~~~~~~~~~~avK~~~~~~~~~~~~~~~e~~~l~~l~   88 (174)
                      .....+.|++|.+|.||.|.|. |..+++|+-...  .....+..|+.++..+.
T Consensus        23 ~~~v~~~L~KG~~s~Vyl~~~~-~~~~a~Kvrr~d--s~r~~l~kEakiLeil~   73 (201)
T COG2112          23 ELRVEKELAKGTTSVVYLGEWR-GGEVALKVRRRD--SPRRNLEKEAKILEILA   73 (201)
T ss_pred             hhhhhhhhhcccccEEEEeecc-CceEEEEEecCC--cchhhHHHHHHHHHHhh
Confidence            3455688999999999999987 557888886533  34567888999888776

>PRK10593 hypothetical protein; Provisional

Probab=93.59  E-value=0.69  Score=34.00  Aligned_cols=108  Identities=9%  Similarity=-0.013  Sum_probs=64.8

Q ss_pred             eeecceecccCCeeEEEEEEcCCCEEEEEEeeccCccchhHHHHHHHHHhccccc-CCCeeeeecceec---CCCcccch
Q 039630           36 FRTSNKIGEGGFGSVYKGRLEDGTVVAVNVLSVESKQGETEFMSEVASMANINIC-HENLVKLHGGCID---GPSRILAP  111 (174)
Q Consensus        36 ~~~~~~lg~G~~g~V~~~~~~~~~~~avK~~~~~~~~~~~~~~~e~~~l~~l~~~-h~~i~~~~~~~~~---~~~~~lv~  111 (174)
                      ....+.||.|..+.||.....++ .+.+|..+..  .....+..|...++.+... ...+.++++.+..   .+..++++
T Consensus        16 ~~~~~~i~~G~~~~vy~~~~~~~-~~~~k~~~~~--~~~~~~~~Ea~~L~~L~~~~~vpVP~V~~~~~~~~~~g~~~LVm   92 (297)
T PRK10593         16 LSRVECISEQPYAALWALYDSQG-NPMPLMARSF--STPGVAQQEAWKLSMLARSGTVRMPTVYGVMTHEQSPGPDVLLL   92 (297)
T ss_pred             hheeeecCCccceeEEEEEcCCC-CEEEEEeccc--ccchHHHHHHHHHHHHccCCCCCcCcEEEEeccCCcCCCeEEEE
Confidence            44457899999999998765545 4667775421  1334778888888877511 1356777766543   24455555


Q ss_pred             hhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhc
Q 039630          112 LQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEE  169 (174)
Q Consensus       112 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~  169 (174)
                        +..++..+..                     ..........+..+++++|+-||+.
T Consensus        93 --E~i~G~~~~~---------------------~~~~~~~~~~l~~~l~~~La~LH~~  127 (297)
T PRK10593         93 --ERLRGVSVEA---------------------PARTPERWEQLKDQIVEGLLAWHRI  127 (297)
T ss_pred             --eccCCEecCC---------------------CCCCHHHHHHHHHHHHHHHHHHhCC
Confidence              4443332211                     0012233445667888999999974

>PF13095 FTA2: Kinetochore Sim4 complex subunit FTA2

Probab=93.41  E-value=0.66  Score=32.17  Aligned_cols=82  Identities=21%  Similarity=0.325  Sum_probs=54.9

Q ss_pred             cCcccceechhhHHhhcCCeeecceecccCC-eeEEEEEEcCCCEEEEEEeecc---Cc------------------cch
Q 039630           17 QGYKFSKISYNELKIATNGFRTSNKIGEGGF-GSVYKGRLEDGTVVAVNVLSVE---SK------------------QGE   74 (174)
Q Consensus        17 ~~~~~~~~~~~~~~~~~~~~~~~~~lg~G~~-g~V~~~~~~~~~~~avK~~~~~---~~------------------~~~   74 (174)
                      +.+.+..|+.     .+.+++.++.||.|.- |.|++.... |..+|+|+.+..   .+                  ...
T Consensus        25 ~gPKL~~F~~-----h~~~I~flefLg~g~~~~~V~kv~I~-g~~YALKlf~~~~~~~~~~~~~~~~~~~~~~~~~~~y~   98 (207)
T PF13095_consen   25 PGPKLEPFTH-----HGDDIEFLEFLGHGSHDGYVFKVEID-GRIYALKLFRFWDYTEPDYTRERFAGHETSLSTPAHYA   98 (207)
T ss_pred             CCCCcCCcCC-----CCCcEeeeeecCCCCceeEEEEEEEC-CeEEEEEEeeccccCCCccccccccccccccchhhhhc
Confidence            3455555555     2378999999999999 999999985 779999994321   00                  112


Q ss_pred             hHHHHHHHHHhccccc-CCCe--eeeecceecC
Q 039630           75 TEFMSEVASMANINIC-HENL--VKLHGGCIDG  104 (174)
Q Consensus        75 ~~~~~e~~~l~~l~~~-h~~i--~~~~~~~~~~  104 (174)
                      ..|..|.+...+++.. +.++  ++.+|+..-.
T Consensus        99 ~PF~~ECRAfgRLke~~~e~~~Avkc~Gyl~L~  131 (207)
T PF13095_consen   99 DPFNCECRAFGRLKEAGREGLWAVKCHGYLLLT  131 (207)
T ss_pred             ChHHHHHHhhHHHHhccccCceEEEeeEEEEEc
Confidence            3467788777766421 3344  7888887544

>TIGR02172 Fb_sc_TIGR02172 Fibrobacter succinogenes paralogous family TIGR02172

Probab=93.14  E-value=1.1  Score=31.47  Aligned_cols=104  Identities=17%  Similarity=0.062  Sum_probs=59.6

Q ss_pred             ceecccCCeeEEEEEEcCCCEEEEEEeeccCccchhHHHHHHHHHhcccccCCCeeeeecceecCCCcccchhhhhhhhh
Q 039630           40 NKIGEGGFGSVYKGRLEDGTVVAVNVLSVESKQGETEFMSEVASMANINICHENLVKLHGGCIDGPSRILAPLQASIEAL  119 (174)
Q Consensus        40 ~~lg~G~~g~V~~~~~~~~~~~avK~~~~~~~~~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~~~~~~~lv~~~~~~~~~  119 (174)
                      ..||.|..+.||+.  . +..+++|.....  .......+|..++..+....-.+.+.+......+...+++  +..++.
T Consensus         7 ~~i~~G~t~~~y~~--~-~~~~VlR~~~~~--~~~~~i~~E~~~l~~l~~~glpvP~~~~~~~~~~~~glv~--e~i~G~   79 (226)
T TIGR02172         7 TQTGEGGNGESYTH--K-TGKWMLKLYNPG--FDKETIKREFDASRKVFSLGIPTPHPFDLVEDGGRLGLIY--ELIVGK   79 (226)
T ss_pred             eeecCCCCcceeEe--c-CCCEEEEeCCCC--CCHHHHHHHHHHHHHHHHcCCCCCceEEEEecCCeeeeee--eecCCc
Confidence            67899999999974  2 445678887532  2345578899888877511122445555554444333333  333332


Q ss_pred             hhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhc
Q 039630          120 FLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEE  169 (174)
Q Consensus       120 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~  169 (174)
                      ....+                   ....+......++.+++..+.-||+.
T Consensus        80 ~~~~~-------------------~~~~~~~~~~~l~~~la~~l~~lH~~  110 (226)
T TIGR02172        80 RSFSR-------------------IISDNPSRLEEIAKIFAEMAKKLHST  110 (226)
T ss_pred             cchhh-------------------hhcCCHHHHHHHHHHHHHHHHHHhCC
Confidence            11110                   01123344456788888989889974

This model describes a paralogous family of five proteins, likely to be enzymes, in the rumen bacterium Fibrobacter succinogenes S85. Members show homology to proteins described by PFAM model pfam01636, a phosphotransferase enzyme family associated with resistance to aminoglycoside antibiotics. However, members of this family score below the current trusted and noise cutoffs for pfam01636.

>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]

Probab=92.92  E-value=0.083  Score=41.58  Aligned_cols=116  Identities=18%  Similarity=0.119  Sum_probs=76.1

Q ss_pred             eeecceecc--cCCeeEEEEEE---cCCCEEEEEEeecc--CccchhHHHHHHHHHhcccccCCCeeeeecceecCCCcc
Q 039630           36 FRTSNKIGE--GGFGSVYKGRL---EDGTVVAVNVLSVE--SKQGETEFMSEVASMANINICHENLVKLHGGCIDGPSRI  108 (174)
Q Consensus        36 ~~~~~~lg~--G~~g~V~~~~~---~~~~~~avK~~~~~--~~~~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~~~~~~~  108 (174)
                      +.....+|.  |.+|.+|.+..   .++..+|+|.-+..  .+.....-.+|+.....++ .|++.++.+..+...+..+
T Consensus       116 ~~~~~~~g~~~g~~~s~~~~~~~~~~s~~~~a~k~s~~p~s~p~~~~~k~~~~~s~~~i~-~~~~~v~~~~~~e~~~~lf  194 (524)
T KOG0601|consen  116 FPISSRTGSLPGSKGSVFKSRCTNSESPHKFAVKKSKIPFSPPLDSKRKLREFLSHHKID-SHENPVRDSPAWEGSGILF  194 (524)
T ss_pred             cccccccccCCCCCceeecccCCcccCCcccccccccCCCCCccccccccchhhcccccC-ccccccccCcccccCCcce
Confidence            455678899  99999998773   45778899885433  3344444566776666666 6999999888888777766


Q ss_pred             cchhhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHH----HHHHhhhcc
Q 039630          109 LAPLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIAR----GLAYIHEEI  170 (174)
Q Consensus       109 lv~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~----gl~yLH~~~  170 (174)
                      +-.  +...  .-...+|.              .....++...++....+...    |+.++|++.
T Consensus       195 iqt--E~~~--~sl~~~~~--------------~~~~~~p~~~l~~~~~~~~~~~~~al~~~hs~~  242 (524)
T KOG0601|consen  195 IQT--ELCG--ESLQSYCH--------------TPCNFLPDNLLWNSLRDWLSRDVTALSHLHSNN  242 (524)
T ss_pred             eee--cccc--chhHHhhh--------------cccccCCchhhhhHHhhhhhcccccccccCCCc
Confidence            655  2222  11222211              11223566677777778888    999999853

>KOG3087 consensus Serine/threonine protein kinase [General function prediction only]

Probab=92.61  E-value=0.79  Score=31.54  Aligned_cols=114  Identities=13%  Similarity=0.039  Sum_probs=66.5

Q ss_pred             ecceecccCCeeEEEEEEcCCCEEEEEEeeccC--------ccchhHHHHHHHHHhcccccCCCeeeeecceecCCCccc
Q 039630           38 TSNKIGEGGFGSVYKGRLEDGTVVAVNVLSVES--------KQGETEFMSEVASMANINICHENLVKLHGGCIDGPSRIL  109 (174)
Q Consensus        38 ~~~~lg~G~~g~V~~~~~~~~~~~avK~~~~~~--------~~~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~~~~~~~l  109 (174)
                      .+..+-+|+-+.|+.+.++ |+.+.+|.-....        .-...+..+|+.++.++.  .-.|....=.+.+.....+
T Consensus        11 ~l~likQGAEArv~~~~~~-Ge~~iIK~Rf~K~YRHP~LD~kLtr~Rt~~Ear~l~k~~--~~GI~~P~l~~~D~~~~~i   87 (229)
T KOG3087|consen   11 SLELIKQGAEARVPRGSFS-GEAAIIKERFSKRYRHPALDQKLTRKRTKQEARLLAKCR--ALGIPAPRLIFIDTYGGQI   87 (229)
T ss_pred             cceeeeccceeeEeeeccC-CceeEEeecccccccchHHHHHHHHHHHHHHHHHHHHHH--HhCCCCceEEEEecCCCeE
Confidence            3467778999999999876 6666676543221        112456788999998876  4444444444445555555


Q ss_pred             chhhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhc
Q 039630          110 APLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEE  169 (174)
Q Consensus       110 v~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~  169 (174)
                      +|  |+.++......++-...            ... ........++.+|=+.+.-||++
T Consensus        88 ~M--E~~~g~~~vk~~i~~~~------------~~~-~~d~~~~~~~~~iG~~igklH~n  132 (229)
T KOG3087|consen   88 YM--EFIDGASTVKDFILSTM------------EDE-SEDEGLAELARRIGELIGKLHDN  132 (229)
T ss_pred             EE--EeccchhHHHHHHHHHc------------cCc-ccchhHHHHHHHHHHHHHHhhhC
Confidence            55  65555443333321100            000 11122256888888889999975

>cd05150 APH Aminoglycoside 3'-phosphotransferase (APH)

Probab=92.40  E-value=0.87  Score=32.15  Aligned_cols=100  Identities=11%  Similarity=0.092  Sum_probs=58.2

Q ss_pred             eecccCC-eeEEEEEEcCCCEEEEEEeeccCccchhHHHHHHHHHhcccccCCCeeeeecceecCCCcccchhhhhhhhh
Q 039630           41 KIGEGGF-GSVYKGRLEDGTVVAVNVLSVESKQGETEFMSEVASMANINICHENLVKLHGGCIDGPSRILAPLQASIEAL  119 (174)
Q Consensus        41 ~lg~G~~-g~V~~~~~~~~~~~avK~~~~~~~~~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~~~~~~~lv~~~~~~~~~  119 (174)
                      .|-.|.+ ..||+.... +..+.+|+.....   .....+|+.++..+. .+-.+.++++.....+..++++  ++.++.
T Consensus         5 ~~~~g~~~~~v~~~~~~-~~~~~vk~~~~~~---~~~~~~E~~~l~~l~-~~~~vP~v~~~~~~~~~~~lv~--e~i~G~   77 (244)
T cd05150           5 RVTEGQSGATVYRLDGK-NPGLYLKIAPSGP---TYELEREAERLRWLA-GKLPVPEVIDYGSDDGRAWLLT--SAVPGV   77 (244)
T ss_pred             ecCCCCCcCeEEEEcCC-CCcEEEEecCCCc---ccchHHHHHHHHHHH-hcCCCCeEEEEEecCCccEEEE--EeeCCc
Confidence            4455665 668887654 3567888775332   345678888888775 2344556666555444455555  444443


Q ss_pred             hhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhc
Q 039630          120 FLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEE  169 (174)
Q Consensus       120 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~  169 (174)
                      .+....                      .......++.++++.+.-||+.
T Consensus        78 ~l~~~~----------------------~~~~~~~~~~~l~~~l~~lH~i  105 (244)
T cd05150          78 PAAALW----------------------EELEPERLVDALAEALRRLHAL  105 (244)
T ss_pred             cHhHhh----------------------cccCHHHHHHHHHHHHHHHhcC
Confidence            332210                      0011234678888888889874

The APH subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). APH catalyzes the transfer of the gamma-phosphoryl group from ATP to aminoglycoside antibiotics such as kanamycin, streptomycin, neomycin, and gentamicin, among others. The aminoglycoside antibiotics target the 30S ribosome and promote miscoding, leading to the production of defective proteins which insert into the bacterial membrane, resulting in membrane damage and the ultimate demise of the bacterium. Phosphorylation of the aminoglycoside antibiotics results in their inactivation, leading to bacterial antibiotic resistance. The APH gene is found on transposons and plasmids and is thought to have originated as a self-defense mechanism used by microorganisms that produce the antibio

>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]

Probab=92.19  E-value=0.032  Score=44.99  Aligned_cols=116  Identities=18%  Similarity=0.246  Sum_probs=73.6

Q ss_pred             CCeeecceecccCCeeEEEEEE--cCCCEEEEEEeeccC--ccchhHHHHHHHHHhcccccCCCeeeeecceecCCCccc
Q 039630           34 NGFRTSNKIGEGGFGSVYKGRL--EDGTVVAVNVLSVES--KQGETEFMSEVASMANINICHENLVKLHGGCIDGPSRIL  109 (174)
Q Consensus        34 ~~~~~~~~lg~G~~g~V~~~~~--~~~~~~avK~~~~~~--~~~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~~~~~~~l  109 (174)
                      ..|...+.||+|+|+.+-....  .....+++|.+....  .........|..+-..+. .|.|++.+++.....+..++
T Consensus        20 ~~~~~~~~ig~gs~~~~~~~~~~~~~~~~~a~~~~s~~~~~~~~~~~i~~e~~~~~~~s-~h~n~~~~~~~~~~~~~~~~   98 (601)
T KOG0590|consen   20 SQYKLSRSIGKGSFSSSALASNSRDPESSSATKPISIPPKSEDSSEHIDTETDIQKKLS-KHSNTVHMIEPSSSPRSYLL   98 (601)
T ss_pred             ccccccccccccccchhhhhhhcCCCcceeeccCCCCCCCccchhhhcCcccccccccc-ccccccccCCccCCCccccc
Confidence            4566677899999999887663  234466666665442  222333445666655554 49999999999988877666


Q ss_pred             chhhhhhhhhhhhhhhhcccceeeeeeecCCCCCcc-cCCHHHHHHHHHHHHHHHHHhh
Q 039630          110 APLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRV-KFNWIARREIALGIARGLAYIH  167 (174)
Q Consensus       110 v~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~qi~~gl~yLH  167 (174)
                      ..  ++..++.++...          .     .... ..+....-.+..|+..++.|+|
T Consensus        99 ~~--~~s~g~~~f~~i----------~-----~~~~~~~~~~~~~~~~~ql~s~l~~~H  140 (601)
T KOG0590|consen   99 SL--SYSDGGSLFSKI----------S-----HPDSTGTSSSSASRYLPQLNSGLSYLH  140 (601)
T ss_pred             cc--Cccccccccccc----------c-----cCCccCCCCcchhhhhhhhccCccccC
Confidence            65  444444443311          0     1111 2344455568899999999999

>KOG1033 consensus eIF-2alpha kinase PEK/EIF2AK3 [Translation, ribosomal structure and biogenesis]

Probab=91.95  E-value=0.025  Score=43.94  Aligned_cols=71  Identities=24%  Similarity=0.532  Sum_probs=55.2

Q ss_pred             cCCeeecceecccCCeeEEEEE-EcCCCEEEEEEeeccCc-cchhHHHHHHHHHhcccccCCCeeeeecceecCC
Q 039630           33 TNGFRTSNKIGEGGFGSVYKGR-LEDGTVVAVNVLSVESK-QGETEFMSEVASMANINICHENLVKLHGGCIDGP  105 (174)
Q Consensus        33 ~~~~~~~~~lg~G~~g~V~~~~-~~~~~~~avK~~~~~~~-~~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~~~~  105 (174)
                      .+++..+.++|.|+||.|+.+. .-++...|||.|...+. .......+|..-+..+.  |++++.+...+...+
T Consensus        48 a~~~e~~~~~~~~g~~~~~~~~n~~d~~~~avkritlkn~e~s~~rvl~~~~s~a~fe--h~g~~~~~ha~~~~~  120 (516)
T KOG1033|consen   48 ANDFEPGQCLGRGGFGVVFSAQNKADENKYAVKRITLKNREESRSRVLREVSSLAEFE--HPGIKRYFHAWYERP  120 (516)
T ss_pred             hccccccccccccCccccCCccccccchhhHHHHhcccchhhhhhhhhccccchhhhc--ccchhhheeceecCC
Confidence            3578889999999999999887 34455789999976643 34556778888888888  999998877775543

>PF03881 Fructosamin_kin: Fructosamine kinase; InterPro: IPR016477 Ketosamines derive from a non-enzymatic reaction between a sugar and a protein []

Probab=86.23  E-value=9.3  Score=28.10  Aligned_cols=72  Identities=17%  Similarity=0.165  Sum_probs=42.3

Q ss_pred             eeecceecccCCeeEEEEEEcCCCEEEEEEeeccCccchhHHHHHHHHHhcccc-cCCCeeeeecceecCCCcccch
Q 039630           36 FRTSNKIGEGGFGSVYKGRLEDGTVVAVNVLSVESKQGETEFMSEVASMANINI-CHENLVKLHGGCIDGPSRILAP  111 (174)
Q Consensus        36 ~~~~~~lg~G~~g~V~~~~~~~~~~~avK~~~~~~~~~~~~~~~e~~~l~~l~~-~h~~i~~~~~~~~~~~~~~lv~  111 (174)
                      .+..+.++.|....+|+.. .++..+-||+-.   ......+..|..-|+.+.. ....+.+++++....+..++++
T Consensus        19 i~~~~~v~GG~i~~a~~~~-~~~~~~FvK~~~---~~~~~~f~~Ea~gL~~L~~~~~~~vP~vi~~G~~~~~~fLll   91 (288)
T PF03881_consen   19 ITSIEPVSGGDINEAYRLD-TDGGSYFVKVNS---ESGRDMFEGEAEGLKALAEANPIRVPKVIAWGEYDDDAFLLL   91 (288)
T ss_dssp             --EEEEE--SSSSEEEEEE-TTS-EEEEEEEE---GGGCCHHHHHHHHHHHHCHTTTSBS--EEEEEE-SSCCEEEE
T ss_pred             eeeeEecCCCChhheEEEE-CCCccEEEEecC---hhhHHHHHHHHHHHHHHHhcCCCCCCeEEEEEeecCCceEEE
Confidence            4556788888888888876 557788899876   2233456777777766631 1455677777776665555555

Ketosamine-3-kinases (KT3K), of which fructosamine-3-kinase (FN3K) is the best-known example, catalyse the phosphorylation of the ketosamine moiety of glycated proteins. The instability of a phosphorylated ketosamine leads to its degradation, and KT3K is thus thought to be involved in protein repair []. The function of the prokaryotic members of this group has not been established. However, several lines of evidence indicate that they may function as fructosamine-3-kinases (FN3K). First, they are similar to characterised FN3K from mouse and human. Second, the Escherichia coli members are found in close proximity on the genome to fructose-6-phosphate kinase (PfkB). Last, FN3K activity has been found in a Anacystis montana (Gloeocapsa montana Kutzing 1843) [], indicating such activity-directly demonstrated in eukaryotes-is nonetheless not confined to eukaryotes. This family includes eukaryotic fructosamine-3-kinase enzymes [] which may initiate a process leading to the deglycation of fructoselysine and of glycated proteins and in the phosphorylation of 1-deoxy-1-morpholinofructose, fructoselysine, fructoseglycine, fructose and glycated lysozyme. The family also includes bacterial members that have not been characterised but probably have a similar or identical function. For additional information please see [].; PDB: 3JR1_B 3F7W_A.

>PRK09550 mtnK methylthioribose kinase; Reviewed

Probab=85.16  E-value=6.3  Score=30.48  Aligned_cols=80  Identities=13%  Similarity=0.063  Sum_probs=49.9

Q ss_pred             cceecccCCeeEEEEEEcCC-CEEEEEEeecc------C-ccchhHHHHHHHHHhcccc-cCCCeeeeecceecCCCccc
Q 039630           39 SNKIGEGGFGSVYKGRLEDG-TVVAVNVLSVE------S-KQGETEFMSEVASMANINI-CHENLVKLHGGCIDGPSRIL  109 (174)
Q Consensus        39 ~~~lg~G~~g~V~~~~~~~~-~~~avK~~~~~------~-~~~~~~~~~e~~~l~~l~~-~h~~i~~~~~~~~~~~~~~l  109 (174)
                      .+.||.|.+..||+....+| +.+.||.-...      . +...+....|...|..+.. ....+++++...  .+..++
T Consensus        31 ~~elggGn~N~VyrV~~~~g~~svIVKqa~p~~r~~g~~wpl~~eR~~~Eae~L~~l~~~~p~~VPkV~~~D--~~~~~l  108 (401)
T PRK09550         31 AREIGDGNLNLVFRVSDTEGGKSVIVKQALPYVRVVGESWPLTLDRARIEAEALKIQAKYVPDLVPKVYHYD--EELAVT  108 (401)
T ss_pred             eeEcCCCceEEEEEEEeCCCCeEEEEEecCcccccccccccccHHHHHHHHHHHHHHHhhCCCCCCeEEEEC--CCCCEE
Confidence            36789999999999987666 48999985411      1 2234566778887776531 123456666553  344566


Q ss_pred             chhhhhhhhhhhh
Q 039630          110 APLQASIEALFLF  122 (174)
Q Consensus       110 v~~~~~~~~~~l~  122 (174)
                      ++  ++.+....+
T Consensus       109 VM--E~L~~~~~l  119 (401)
T PRK09550        109 VM--EDLSDHKIL  119 (401)
T ss_pred             EE--ecCCCccHH
Confidence            66  665554433

>KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis]

Probab=83.30  E-value=1.9  Score=37.64  Aligned_cols=23  Identities=30%  Similarity=0.362  Sum_probs=19.8

Q ss_pred             CHHHHHHHHHHHHHHHHHhhhcc
Q 039630          148 NWIARREIALGIARGLAYIHEEI  170 (174)
Q Consensus       148 ~~~~~~~~~~qi~~gl~yLH~~~  170 (174)
                      .....++++++|++||+|+|+++
T Consensus       695 ~~d~~wrLFreIlEGLaYIH~~g  717 (1351)
T KOG1035|consen  695 QRDEAWRLFREILEGLAYIHDQG  717 (1351)
T ss_pred             hhHHHHHHHHHHHHHHHHHHhCc
Confidence            46677889999999999999865

>PRK09902 hypothetical protein; Provisional

Probab=83.02  E-value=14  Score=26.01  Aligned_cols=113  Identities=12%  Similarity=0.132  Sum_probs=60.9

Q ss_pred             ecccCCeeEEEEEEcCCCEEEEEEeecc------CccchhHHHHHHHHHhcccccCCCeeeeecceecCC----Ccccch
Q 039630           42 IGEGGFGSVYKGRLEDGTVVAVNVLSVE------SKQGETEFMSEVASMANINICHENLVKLHGGCIDGP----SRILAP  111 (174)
Q Consensus        42 lg~G~~g~V~~~~~~~~~~~avK~~~~~------~~~~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~~~~----~~~lv~  111 (174)
                      -|+|+.+.|++-... |..+-+|.-...      .+.....+.+|...+..+......+.++........    ..++|.
T Consensus        26 ~~rgG~SgV~r~~~~-g~~~ylKrq~nhl~~s~r~P~g~ptf~rE~~~L~~L~~~GvPVP~pvf~~~~k~~~~~rA~LVT  104 (216)
T PRK09902         26 YRRNGMSGVQCVERN-GKKLYVKRMTHHLFHSVRYPFGRPTIVREVAVIKELERAGVIVPKIVFGEAVKIEGEWRALLVT  104 (216)
T ss_pred             cCCCCcceEEEEEeC-CcEEEEEeccCcccccccCCCCchHHHHHHHHHHHHHHcCCCCCccceeeeeccCCceEEEEEE
Confidence            356888888886654 446777776522      134567899999998887522333444432111111    123333


Q ss_pred             hhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhcc
Q 039630          112 LQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEI  170 (174)
Q Consensus       112 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  170 (174)
                        +..++..-+..++.             .....+.+......+..+++..+.-||+..
T Consensus       105 --e~L~g~~~L~~~l~-------------~~~~~~~~~~~k~~il~~va~~ia~LH~~G  148 (216)
T PRK09902        105 --EDMAGFISIADWYA-------------QHAVSPYSDEVRQAMLKAVALAFKKMHSVN  148 (216)
T ss_pred             --EeCCCCccHHHHHh-------------cCCcCCcchHHHHHHHHHHHHHHHHHHHCC
Confidence              22221111111110             001112355555678899999999999864

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	174
3tl8_A	349	The Avrptob-Bak1 Complex Reveals Two Structurally S		6e-20
3uim_A	326	Structural Basis For The Impact Of Phosphorylation		4e-19
2nru_A	307	Crystal Structure Of Irak-4 Length = 307		9e-12
2nry_A	307	Crystal Structure Of Irak-4 Length = 307		9e-12
2oib_A	301	Crystal Structure Of Irak4 Kinase Domain Apo Form L		5e-11
2o8y_A	298	Apo Irak4 Kinase Domain Length = 298		2e-09
3hgk_A	327	Crystal Structure Of Effect Protein Avrptob Complex		4e-09
2qkw_B	321	Structural Basis For Activation Of Plant Immunity B		4e-09
4f1m_A	287	Crystal Structure Of The G1179s Roco4 Kinase Domain		6e-09
4f1o_A	287	Crystal Structure Of The L1180t Mutant Roco4 Kinase		6e-09
4f0f_A	287	Crystal Structure Of The Roco4 Kinase Domain Bound		6e-09
2p0c_A	313	Catalytic Domain Of The Proto-Oncogene Tyrosine-Pro		1e-05
4asz_A	299	Crystal Structure Of Apo Trkb Kinase Domain Length		4e-05
3qrj_A	277	The Crystal Structure Of Human Abl1 Kinase Domain T		1e-04
3g2f_A	336	Crystal Structure Of The Kinase Domain Of Bone Morp		1e-04
3qri_A	277	The Crystal Structure Of Human Abl1 Kinase Domain I		1e-04
2gqg_A	278	X-Ray Crystal Structure Of Dasatinib (Bms-354825) B		1e-04
1fpu_A	293	Crystal Structure Of Abl Kinase Domain In Complex W		1e-04
2e2b_A	293	Crystal Structure Of The C-Abl Kinase Domain In Com		2e-04
2hz0_A	270	Abl Kinase Domain In Complex With Nvp-Aeg082 Length		2e-04
2hyy_A	273	Human Abl Kinase Domain In Complex With Imatinib (S		2e-04
3dk6_A	293	Crystal Structure Of Mutant Abl Kinase Domain In Co		2e-04
4id7_A	273	Ack1 Kinase In Complex With The Inhibitor Cis-3-[8-		2e-04
3eqp_B	276	Crystal Structure Of Ack1 With Compound T95 Length		2e-04
4ewh_B	275	Co-Crystal Structure Of Ack1 With Inhibitor Length		2e-04
2hzi_A	277	Abl Kinase Domain In Complex With Pd180970 Length =		2e-04
4hzr_A	277	Crystal Structure Of Ack1 Kinase Domain Length = 27		2e-04
2g1t_A	287	A Src-Like Inactive Conformation In The Abl Tyrosin		2e-04
3oy3_A	284	Crystal Structure Of Abl T315i Mutant Kinase Domain		2e-04
2g2f_A	287	A Src-Like Inactive Conformation In The Abl Tyrosin		2e-04
3pyy_A	298	Discovery And Characterization Of A Cell-Permeable,		2e-04
2qoh_A	288	Crystal Structure Of Abl Kinase Bound With Ppy-a Le		2e-04
3oxz_A	284	Crystal Structure Of Abl Kinase Domain Bound With A		2e-04
2z60_A	288	Crystal Structure Of The T315i Mutant Of Abl Kinase		2e-04
2hiw_A	287	Crystal Structure Of Inactive Conformation Abl Kina		2e-04
2f4j_A	287	Structure Of The Kinase Domain Of An Imatinib-Resis		2e-04
2v7a_A	286	Crystal Structure Of The T315i Abl Mutant In Comple		2e-04
4hzs_A	341	Crystal Structure Of Ack1 Kinase Domain With C-term		3e-04
1u46_A	291	Crystal Structure Of The Unphosphorylated Kinase Do		3e-04
1u54_A	291	Crystal Structures Of The Phosphorylated And Unphos		3e-04
3v5q_A	297	Discovery Of A Selective Trk Inhibitor With Efficac		3e-04
1luf_A	343	Crystal Structure Of The Musk Tyrosine Kinase: Insi		3e-04
3ppz_A	309	Crystal Structure Of Ctr1 Kinase Domain In Complex		4e-04
3dk3_A	293	Crystal Structure Of Mutant Abl Kinase Domain In Co		5e-04
2y4i_B	319	Ksr2-Mek1 Heterodimer Length = 319		5e-04
3p86_A	309	Crystal Structure Of Ctr1 Kinase Domain Mutant D676		5e-04
1opk_A	495	Structural Basis For The Auto-Inhibition Of C-Abl T		6e-04
3q4t_A	322	Crystal Structure Of Activin Receptor Type-Iia (Acv		6e-04
2fo0_A	495	Organization Of The Sh3-Sh2 Unit In Active And Inac		7e-04
1opl_A	537	Structural Basis For The Auto-Inhibition Of C-Abl T		7e-04
3dk7_A	277	Crystal Structure Of Mutant Abl Kinase Domain In Co		7e-04
2x7f_A	326	Crystal Structure Of The Kinase Domain Of Human Tra		8e-04

>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar Kinaseinteracting Domains In A Single Type Iii Effector Length = 349

Iteration: 1
 Score = 93.2 bits (230), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 58/160 (36%), Positives = 82/160 (51%), Gaps = 37/160 (23%)
Query: 20  KFSKISYNELKIATNGFRTSNKIGEGGFGSVYKGRLEDGTVVAVNVLSVESKQ-GETEFM 78
           +  + S  EL++A++ F   N +G GGFG VYKGRL DGT+VAV  L  E  Q GE +F 
Sbjct: 24  QLKRFSLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERXQGGELQFQ 83
Query: 79  SEVA--SMANINICHENLVKLHGGCIDGPSRILAPLQASIEALFLFTKLWKMDKFISIYV 136
           +EV   SMA     H NL++L G C+    R+L                      +  Y+
Sbjct: 84  TEVEMISMA----VHRNLLRLRGFCMTPTERLL----------------------VYPYM 117
Query: 137 VSGS--------KKNRVKFNWIARREIALGIARGLAYIHE 168
            +GS         +++   +W  R+ IALG ARGLAY+H+
Sbjct: 118 ANGSVASCLRERPESQPPLDWPKRQRIALGSARGLAYLHD 157

>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On Plant Receptor- Like Kinase Bak1 Activation Length = 326

Iteration: 1
 Score = 90.9 bits (224), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 57/160 (35%), Positives = 81/160 (50%), Gaps = 37/160 (23%)
Query: 20  KFSKISYNELKIATNGFRTSNKIGEGGFGSVYKGRLEDGTVVAVNVLSVESKQ-GETEFM 78
           +  + S  EL++A++ F   N +G GGFG VYKGRL DG +VAV  L  E  Q GE +F 
Sbjct: 16  QLKRFSLRELQVASDNFXNKNILGRGGFGKVYKGRLADGXLVAVKRLKEERTQGGELQFQ 75
Query: 79  SEVA--SMANINICHENLVKLHGGCIDGPSRILAPLQASIEALFLFTKLWKMDKFISIYV 136
           +EV   SMA     H NL++L G C+    R+L                      +  Y+
Sbjct: 76  TEVEMISMA----VHRNLLRLRGFCMTPTERLL----------------------VYPYM 109
Query: 137 VSGS--------KKNRVKFNWIARREIALGIARGLAYIHE 168
            +GS         +++   +W  R+ IALG ARGLAY+H+
Sbjct: 110 ANGSVASCLRERPESQPPLDWPKRQRIALGSARGLAYLHD 149

>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4 Length = 307

Iteration: 1
 Score = 66.2 bits (160), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 56/177 (31%), Positives = 79/177 (44%), Gaps = 46/177 (25%)
Query: 11  NYSRKVQGYKFSKISYNELKIATNGFRT------SNKIGEGGFGSVYKGRLEDGTVVA-- 62
           N S +V   +F   S+ ELK  TN F         NK+GEGGFG VYKG + + TV    
Sbjct: 2   NKSLEVSDTRFHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNNTTVAVKK 61
Query: 63  ----VNVLSVESKQGETEFMSEVASMANINICHENLVKLHGGCIDGPSRILAPLQASIEA 118
               V++ + E KQ   +F  E+  MA     HENLV+L G   DG    L         
Sbjct: 62  LAAMVDITTEELKQ---QFDQEIKVMAKCQ--HENLVELLGFSSDGDDLCL--------- 107
Query: 119 LFLFTKLWKMDKFISIYVVSGSKKNRV-------KFNWIARREIALGIARGLAYIHE 168
                        + +Y+ +GS  +R+         +W  R +IA G A G+ ++HE
Sbjct: 108 -------------VYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHE 151

>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4 Length = 307

Iteration: 1
 Score = 66.2 bits (160), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 56/177 (31%), Positives = 79/177 (44%), Gaps = 46/177 (25%)
Query: 11  NYSRKVQGYKFSKISYNELKIATNGFRT------SNKIGEGGFGSVYKGRLEDGTVVA-- 62
           N S +V   +F   S+ ELK  TN F         NK+GEGGFG VYKG + + TV    
Sbjct: 2   NKSLEVSDTRFHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNNTTVAVKK 61
Query: 63  ----VNVLSVESKQGETEFMSEVASMANINICHENLVKLHGGCIDGPSRILAPLQASIEA 118
               V++ + E KQ   +F  E+  MA     HENLV+L G   DG    L         
Sbjct: 62  LAAMVDITTEELKQ---QFDQEIKVMAKCQ--HENLVELLGFSSDGDDLCL--------- 107
Query: 119 LFLFTKLWKMDKFISIYVVSGSKKNRV-------KFNWIARREIALGIARGLAYIHE 168
                        + +Y+ +GS  +R+         +W  R +IA G A G+ ++HE
Sbjct: 108 -------------VYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHE 151

>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form Length = 301

Iteration: 1
 Score = 63.9 bits (154), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 54/172 (31%), Positives = 76/172 (44%), Gaps = 46/172 (26%)
Query: 16  VQGYKFSKISYNELKIATNGFRT------SNKIGEGGFGSVYKGRLEDGTVVA------V 63
           V   +F   S+ ELK  TN F         NK+GEGGFG VYKG + + TV        V
Sbjct: 1   VSDTRFHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNNTTVAVKKLAAMV 60
Query: 64  NVLSVESKQGETEFMSEVASMANINICHENLVKLHGGCIDGPSRILAPLQASIEALFLFT 123
           ++ + E KQ   +F  E+  MA     HENLV+L G   DG    L              
Sbjct: 61  DITTEELKQ---QFDQEIKVMAKCQ--HENLVELLGFSSDGDDLCL-------------- 101
Query: 124 KLWKMDKFISIYVVSGSKKNRV-------KFNWIARREIALGIARGLAYIHE 168
                   + +Y+ +GS  +R+         +W  R +IA G A G+ ++HE
Sbjct: 102 --------VYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHE 145

>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain Length = 298

Iteration: 1
 Score = 58.5 bits (140), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 52/168 (30%), Positives = 72/168 (42%), Gaps = 46/168 (27%)
Query: 20  KFSKISYNELKIATNGFRT------SNKIGEGGFGSVYKGRLEDGTVVA------VNVLS 67
           +F   S+ ELK  TN F         NK GEGGFG VYKG + + TV        V++ +
Sbjct: 2   RFHSFSFYELKNVTNNFDERPISVGGNKXGEGGFGVVYKGYVNNTTVAVKKLAAMVDITT 61
Query: 68  VESKQGETEFMSEVASMANINICHENLVKLHGGCIDGPSRILAPLQASIEALFLFTKLWK 127
            E KQ   +F  E+   A     HENLV+L G   DG    L                  
Sbjct: 62  EELKQ---QFDQEIKVXAKCQ--HENLVELLGFSSDGDDLCL------------------ 98
Query: 128 MDKFISIYVVSGSKKNRV-------KFNWIARREIALGIARGLAYIHE 168
               + +Y  +GS  +R+         +W  R +IA G A G+ ++HE
Sbjct: 99  ----VYVYXPNGSLLDRLSCLDGTPPLSWHXRCKIAQGAANGINFLHE 142

>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With Kinase Pto Length = 327

Iteration: 1
 Score = 57.4 bits (137), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 48/146 (32%), Positives = 72/146 (49%), Gaps = 18/146 (12%)
Query: 23  KISYNELKIATNGFRTSNKIGEGGFGSVYKGRLEDGTVVAVNVLSVESKQGETEFMSEVA 82
           ++   +L+ ATN F     IG G FG VYKG L DG  VA+   + ES QG  EF +E+ 
Sbjct: 28  RVPLVDLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIE 87
Query: 83  SMANINIC-HENLVKLHGGCIDGPSRILAPLQASIEALFLFTKLWKMDKFISIYVVSGSK 141
           +++    C H +LV L G C +    IL         ++ + +   + + +      GS 
Sbjct: 88  TLS---FCRHPHLVSLIGFCDERNEMIL---------IYKYMENGNLKRHL-----YGSD 130
Query: 142 KNRVKFNWIARREIALGIARGLAYIH 167
              +  +W  R EI +G ARGL Y+H
Sbjct: 131 LPTMSMSWEQRLEICIGAARGLHYLH 156

>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By Bacterial Effector Protein Avrpto Length = 321

Iteration: 1
 Score = 57.4 bits (137), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 48/146 (32%), Positives = 72/146 (49%), Gaps = 18/146 (12%)
Query: 23  KISYNELKIATNGFRTSNKIGEGGFGSVYKGRLEDGTVVAVNVLSVESKQGETEFMSEVA 82
           ++   +L+ ATN F     IG G FG VYKG L DG  VA+   + ES QG  EF +E+ 
Sbjct: 28  RVPLVDLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIE 87
Query: 83  SMANINIC-HENLVKLHGGCIDGPSRILAPLQASIEALFLFTKLWKMDKFISIYVVSGSK 141
           +++    C H +LV L G C +    IL         ++ + +   + + +      GS 
Sbjct: 88  TLS---FCRHPHLVSLIGFCDERNEMIL---------IYKYMENGNLKRHL-----YGSD 130
Query: 142 KNRVKFNWIARREIALGIARGLAYIH 167
              +  +W  R EI +G ARGL Y+H
Sbjct: 131 LPTMSMSWEQRLEICIGAARGLHYLH 156

>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound To Appcp From D. Discoideum Length = 287

Iteration: 1
 Score = 56.6 bits (135), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 47/147 (31%), Positives = 72/147 (48%), Gaps = 29/147 (19%)
Query: 31  IATNGFRTSNKIGEGGFGSVYKGRL-EDGTVVAVNVLSVESKQGET-------EFMSEVA 82
           +A N      +IG+GGFG V+KGRL +D +VVA+  L +   +GET       EF  EV 
Sbjct: 16  LADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVF 75
Query: 83  SMANINICHENLVKLHGGCIDGPSRILAPLQASIEALFLFTKLWKMDKFISIYVVSGSKK 142
            M+N+N  H N+VKL+ G +  P R++      +    L+ +L  +DK   I        
Sbjct: 76  IMSNLN--HPNIVKLY-GLMHNPPRMVMEF---VPCGDLYHRL--LDKAHPI-------- 119
Query: 143 NRVKFNWIARREIALGIARGLAYIHEE 169
                 W  +  + L IA G+ Y+  +
Sbjct: 120 -----KWSVKLRLMLDIALGIEYMQNQ 141

>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain From D. Discoideum Bound To Appcp Length = 287

Iteration: 1
 Score = 56.6 bits (135), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 47/147 (31%), Positives = 72/147 (48%), Gaps = 29/147 (19%)
Query: 31  IATNGFRTSNKIGEGGFGSVYKGRL-EDGTVVAVNVLSVESKQGET-------EFMSEVA 82
           +A N      +IG+GGFG V+KGRL +D +VVA+  L +   +GET       EF  EV 
Sbjct: 16  LADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVF 75
Query: 83  SMANINICHENLVKLHGGCIDGPSRILAPLQASIEALFLFTKLWKMDKFISIYVVSGSKK 142
            M+N+N  H N+VKL+ G +  P R++      +    L+ +L  +DK   I        
Sbjct: 76  IMSNLN--HPNIVKLY-GLMHNPPRMVMEF---VPCGDLYHRL--LDKAHPI-------- 119
Query: 143 NRVKFNWIARREIALGIARGLAYIHEE 169
                 W  +  + L IA G+ Y+  +
Sbjct: 120 -----KWSVKLRLMLDIALGIEYMQNQ 141

>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To Appcp From D. Discoideum Length = 287

Iteration: 1
 Score = 56.6 bits (135), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 47/147 (31%), Positives = 72/147 (48%), Gaps = 29/147 (19%)
Query: 31  IATNGFRTSNKIGEGGFGSVYKGRL-EDGTVVAVNVLSVESKQGET-------EFMSEVA 82
           +A N      +IG+GGFG V+KGRL +D +VVA+  L +   +GET       EF  EV 
Sbjct: 16  LADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVF 75
Query: 83  SMANINICHENLVKLHGGCIDGPSRILAPLQASIEALFLFTKLWKMDKFISIYVVSGSKK 142
            M+N+N  H N+VKL+ G +  P R++      +    L+ +L  +DK   I        
Sbjct: 76  IMSNLN--HPNIVKLY-GLMHNPPRMVMEF---VPCGDLYHRL--LDKAHPI-------- 119
Query: 143 NRVKFNWIARREIALGIARGLAYIHEE 169
                 W  +  + L IA G+ Y+  +
Sbjct: 120 -----KWSVKLRLMLDIALGIEYMQNQ 141

>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein Kina Length = 313

Iteration: 1
 Score = 45.8 bits (107), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 30/72 (41%), Positives = 43/72 (59%), Gaps = 8/72 (11%)
Query: 42  IGEGGFGSVYKGRL--EDGTVVAVNV----LSVESKQGETEFMSEVASMANINICHENLV 95
           +GEG FGSV +G L  EDGT + V V    L   S++   EF+SE A M + +  H N++
Sbjct: 42  LGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFS--HPNVI 99
Query: 96  KLHGGCIDGPSR 107
           +L G CI+  S+
Sbjct: 100 RLLGVCIEMSSQ 111

>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain Length = 299

Iteration: 1
 Score = 44.3 bits (103), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 34/136 (25%), Positives = 58/136 (42%), Gaps = 21/136 (15%)
Query: 41  KIGEGGFGSVYKGRL------EDGTVVAVNVLSVESKQGETEFMSEVASMANINICHENL 94
           ++GEG FG V+          +D  +VAV  L   S     +F  E   + N+   HE++
Sbjct: 20  ELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQ--HEHI 77
Query: 95  VKLHGGCIDGPSRILAPLQASIEALFLFTKLWKMDKFISIY----VVSGSKKNRVKFNWI 150
           VK +G C++G   I+         +F + K   ++KF+  +    V+        +    
Sbjct: 78  VKFYGVCVEGDPLIM---------VFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQS 128
Query: 151 ARREIALGIARGLAYI 166
               IA  IA G+ Y+
Sbjct: 129 QMLHIAQQIAAGMVYL 144

>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i Mutant In Complex With Dcc-2036 Length = 277

Iteration: 1
 Score = 42.7 bits (99), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 28/86 (32%), Positives = 45/86 (52%), Gaps = 4/86 (4%)
Query: 22  SKISYNELKIATNGFRTSNKIGEGGFGSVYKGRLEDGTV-VAVNVLSVESKQGETEFMSE 80
           S  +Y++ ++        +K+G G +G VY+G  +  ++ VAV  L  ++ + E EF+ E
Sbjct: 6   SSPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKE 64
Query: 81  VASMANINICHENLVKLHGGCIDGPS 106
            A M  I   H NLV+L G C   P 
Sbjct: 65  AAVMKEIK--HPNLVQLLGVCTREPP 88

>pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A Resolution Length = 336

Iteration: 1
 Score = 42.7 bits (99), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 36/145 (24%), Positives = 66/145 (45%), Gaps = 18/145 (12%)
Query: 27  NELKIATNGFRTSNKIGEGGFGSVYKGRLEDGTVVAVNVLSVESKQGETEFMSEVASMAN 86
           +E  +  +  +    IG G +G+VYKG L D   VAV V S  ++Q    F++E      
Sbjct: 6   SEPSLDLDNLKLLELIGRGRYGAVYKGSL-DERPVAVKVFSFANRQN---FINEKNIYRV 61
Query: 87  INICHENLVKLHGGCIDGPSRILAPLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVK 146
             + H+N+ +     I G  R+ A  +     +  +     + K++S++           
Sbjct: 62  PLMEHDNIARF----IVGDERVTADGRMEYLLVMEYYPNGSLXKYLSLHTS--------- 108
Query: 147 FNWIARREIALGIARGLAYIHEEIK 171
            +W++   +A  + RGLAY+H E+ 
Sbjct: 109 -DWVSSCRLAHSVTRGLAYLHTELP 132

>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In Complex With Dcc- 2036 Length = 277

Iteration: 1
 Score = 42.4 bits (98), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 28/86 (32%), Positives = 45/86 (52%), Gaps = 4/86 (4%)
Query: 22  SKISYNELKIATNGFRTSNKIGEGGFGSVYKGRLEDGTV-VAVNVLSVESKQGETEFMSE 80
           S  +Y++ ++        +K+G G +G VY+G  +  ++ VAV  L  ++ + E EF+ E
Sbjct: 6   SSPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKE 64
Query: 81  VASMANINICHENLVKLHGGCIDGPS 106
            A M  I   H NLV+L G C   P 
Sbjct: 65  AAVMKEIK--HPNLVQLLGVCTREPP 88

>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To Activated Abl Kinase Domain Length = 278

Iteration: 1
 Score = 42.4 bits (98), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 28/86 (32%), Positives = 45/86 (52%), Gaps = 4/86 (4%)
Query: 22  SKISYNELKIATNGFRTSNKIGEGGFGSVYKGRLEDGTV-VAVNVLSVESKQGETEFMSE 80
           S  +Y++ ++        +K+G G +G VY+G  +  ++ VAV  L  ++ + E EF+ E
Sbjct: 6   SSPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKE 64
Query: 81  VASMANINICHENLVKLHGGCIDGPS 106
            A M  I   H NLV+L G C   P 
Sbjct: 65  AAVMKEIK--HPNLVQLLGVCTREPP 88

>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A Small Molecule Inhibitor Length = 293

Iteration: 1
 Score = 42.4 bits (98), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 28/86 (32%), Positives = 45/86 (52%), Gaps = 4/86 (4%)
Query: 22  SKISYNELKIATNGFRTSNKIGEGGFGSVYKGRLEDGTV-VAVNVLSVESKQGETEFMSE 80
           S  +Y++ ++        +K+G G +G VY+G  +  ++ VAV  L  ++ + E EF+ E
Sbjct: 6   SSPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKE 64
Query: 81  VASMANINICHENLVKLHGGCIDGPS 106
            A M  I   H NLV+L G C   P 
Sbjct: 65  AAVMKEIK--HPNLVQLLGVCTREPP 88

>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex With Inno-406 Length = 293

Iteration: 1
 Score = 42.4 bits (98), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 28/86 (32%), Positives = 45/86 (52%), Gaps = 4/86 (4%)
Query: 22  SKISYNELKIATNGFRTSNKIGEGGFGSVYKGRLEDGTV-VAVNVLSVESKQGETEFMSE 80
           S  +Y++ ++        +K+G G +G VY+G  +  ++ VAV  L  ++ + E EF+ E
Sbjct: 6   SSPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKE 64
Query: 81  VASMANINICHENLVKLHGGCIDGPS 106
            A M  I   H NLV+L G C   P 
Sbjct: 65  AAVMKEIK--HPNLVQLLGVCTREPP 88

>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082 Length = 270

Iteration: 1
 Score = 42.0 bits (97), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 27/83 (32%), Positives = 44/83 (53%), Gaps = 4/83 (4%)
Query: 25  SYNELKIATNGFRTSNKIGEGGFGSVYKGRLEDGTV-VAVNVLSVESKQGETEFMSEVAS 83
           +Y++ ++        +K+G G +G VY+G  +  ++ VAV  L  ++ + E EF+ E A 
Sbjct: 4   NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAV 62
Query: 84  MANINICHENLVKLHGGCIDGPS 106
           M  I   H NLV+L G C   P 
Sbjct: 63  MKEIK--HPNLVQLLGVCTREPP 83

>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571, Glivec) Length = 273

Iteration: 1
 Score = 42.0 bits (97), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 27/83 (32%), Positives = 44/83 (53%), Gaps = 4/83 (4%)
Query: 25  SYNELKIATNGFRTSNKIGEGGFGSVYKGRLEDGTV-VAVNVLSVESKQGETEFMSEVAS 83
           +Y++ ++        +K+G G +G VY+G  +  ++ VAV  L  ++ + E EF+ E A 
Sbjct: 4   NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAV 62
Query: 84  MANINICHENLVKLHGGCIDGPS 106
           M  I   H NLV+L G C   P 
Sbjct: 63  MKEIK--HPNLVQLLGVCTREPP 83

>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex With Small Molecule Fragment Length = 293

Iteration: 1
 Score = 42.0 bits (97), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 28/84 (33%), Positives = 44/84 (52%), Gaps = 4/84 (4%)
Query: 24  ISYNELKIATNGFRTSNKIGEGGFGSVYKGRLEDGTV-VAVNVLSVESKQGETEFMSEVA 82
           +S ++ ++        +K+G G FG VY+G  +  ++ VAV  L  ++ + E EF+ E A
Sbjct: 1   MSLDKWEMERTDITMKHKLGGGQFGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAA 59
Query: 83  SMANINICHENLVKLHGGCIDGPS 106
            M  I   H NLV+L G C   P 
Sbjct: 60  VMKEIK--HPNLVQLLGVCTREPP 81

>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor Cis-3-[8-amino-1-(4- Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol Length = 273

Iteration: 1
 Score = 42.0 bits (97), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 28/99 (28%), Positives = 51/99 (51%), Gaps = 12/99 (12%)
Query: 31  IATNGFRTSNKIGEGGFGSVYKGRLE--DGTVVAVNVLSVES-----KQGETEFMSEVAS 83
           I     R   K+G+G FG V +G  +   G  V+V V  ++       +   +F+ EV +
Sbjct: 5   IGEKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNA 64
Query: 84  MANINICHENLVKLHGGCIDGPSRI---LAPLQASIEAL 119
           M +++  H NL++L+G  +  P ++   LAPL + ++ L
Sbjct: 65  MHSLD--HRNLIRLYGVVLTPPMKMVTELAPLGSLLDRL 101

>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95 Length = 276

Iteration: 1
 Score = 42.0 bits (97), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 28/99 (28%), Positives = 51/99 (51%), Gaps = 12/99 (12%)
Query: 31  IATNGFRTSNKIGEGGFGSVYKGRLE--DGTVVAVNVLSVES-----KQGETEFMSEVAS 83
           I     R   K+G+G FG V +G  +   G  V+V V  ++       +   +F+ EV +
Sbjct: 5   IGEKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNA 64
Query: 84  MANINICHENLVKLHGGCIDGPSRI---LAPLQASIEAL 119
           M +++  H NL++L+G  +  P ++   LAPL + ++ L
Sbjct: 65  MHSLD--HRNLIRLYGVVLTPPMKMVTELAPLGSLLDRL 101

>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor Length = 275

Iteration: 1
 Score = 41.6 bits (96), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 28/99 (28%), Positives = 51/99 (51%), Gaps = 12/99 (12%)
Query: 31  IATNGFRTSNKIGEGGFGSVYKGRLE--DGTVVAVNVLSVES-----KQGETEFMSEVAS 83
           I     R   K+G+G FG V +G  +   G  V+V V  ++       +   +F+ EV +
Sbjct: 5   IGEKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNA 64
Query: 84  MANINICHENLVKLHGGCIDGPSRI---LAPLQASIEAL 119
           M +++  H NL++L+G  +  P ++   LAPL + ++ L
Sbjct: 65  MHSLD--HRNLIRLYGVVLTPPMKMVTELAPLGSLLDRL 101

>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970 Length = 277

Iteration: 1
 Score = 41.6 bits (96), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 27/83 (32%), Positives = 44/83 (53%), Gaps = 4/83 (4%)
Query: 25  SYNELKIATNGFRTSNKIGEGGFGSVYKGRLEDGTV-VAVNVLSVESKQGETEFMSEVAS 83
           +Y++ ++        +K+G G +G VY+G  +  ++ VAV  L  ++ + E EF+ E A 
Sbjct: 8   NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAV 66
Query: 84  MANINICHENLVKLHGGCIDGPS 106
           M  I   H NLV+L G C   P 
Sbjct: 67  MKEIK--HPNLVQLLGVCTREPP 87

>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain Length = 277

Iteration: 1
 Score = 41.6 bits (96), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 28/99 (28%), Positives = 51/99 (51%), Gaps = 12/99 (12%)
Query: 31  IATNGFRTSNKIGEGGFGSVYKGRLE--DGTVVAVNVLSVES-----KQGETEFMSEVAS 83
           I     R   K+G+G FG V +G  +   G  V+V V  ++       +   +F+ EV +
Sbjct: 9   IGEKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNA 68
Query: 84  MANINICHENLVKLHGGCIDGPSRI---LAPLQASIEAL 119
           M +++  H NL++L+G  +  P ++   LAPL + ++ L
Sbjct: 69  MHSLD--HRNLIRLYGVVLTPPMKMVTELAPLGSLLDRL 105

>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine Kinase Domain Length = 287

Iteration: 1
 Score = 41.6 bits (96), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 27/83 (32%), Positives = 44/83 (53%), Gaps = 4/83 (4%)
Query: 25  SYNELKIATNGFRTSNKIGEGGFGSVYKGRLEDGTV-VAVNVLSVESKQGETEFMSEVAS 83
           +Y++ ++        +K+G G +G VY+G  +  ++ VAV  L  ++ + E EF+ E A 
Sbjct: 6   NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAV 64
Query: 84  MANINICHENLVKLHGGCIDGPS 106
           M  I   H NLV+L G C   P 
Sbjct: 65  MKEIK--HPNLVQLLGVCTREPP 85

>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound With A Dfg- Out Inhibitor Ap24589 Length = 284

Iteration: 1
 Score = 41.6 bits (96), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 27/83 (32%), Positives = 44/83 (53%), Gaps = 4/83 (4%)
Query: 25  SYNELKIATNGFRTSNKIGEGGFGSVYKGRLEDGTV-VAVNVLSVESKQGETEFMSEVAS 83
           +Y++ ++        +K+G G +G VY+G  +  ++ VAV  L  ++ + E EF+ E A 
Sbjct: 4   NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAV 62
Query: 84  MANINICHENLVKLHGGCIDGPS 106
           M  I   H NLV+L G C   P 
Sbjct: 63  MKEIK--HPNLVQLLGVCTREPP 83

>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine Kinase Domain Length = 287

Iteration: 1
 Score = 41.6 bits (96), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 27/83 (32%), Positives = 44/83 (53%), Gaps = 4/83 (4%)
Query: 25  SYNELKIATNGFRTSNKIGEGGFGSVYKGRLEDGTV-VAVNVLSVESKQGETEFMSEVAS 83
           +Y++ ++        +K+G G +G VY+G  +  ++ VAV  L  ++ + E EF+ E A 
Sbjct: 6   NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAV 64
Query: 84  MANINICHENLVKLHGGCIDGPS 106
           M  I   H NLV+L G C   P 
Sbjct: 65  MKEIK--HPNLVQLLGVCTREPP 85

>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable, Small-Molecule C- Abl Kinase Activator That Binds To The Myristoyl Binding Site Length = 298

Iteration: 1
 Score = 41.6 bits (96), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 27/83 (32%), Positives = 44/83 (53%), Gaps = 4/83 (4%)
Query: 25  SYNELKIATNGFRTSNKIGEGGFGSVYKGRLEDGTV-VAVNVLSVESKQGETEFMSEVAS 83
           +Y++ ++        +K+G G +G VY+G  +  ++ VAV  L  ++ + E EF+ E A 
Sbjct: 17  NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAV 75
Query: 84  MANINICHENLVKLHGGCIDGPS 106
           M  I   H NLV+L G C   P 
Sbjct: 76  MKEIK--HPNLVQLLGVCTREPP 96

>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a Length = 288

Iteration: 1
 Score = 41.6 bits (96), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 27/83 (32%), Positives = 44/83 (53%), Gaps = 4/83 (4%)
Query: 25  SYNELKIATNGFRTSNKIGEGGFGSVYKGRLEDGTV-VAVNVLSVESKQGETEFMSEVAS 83
           +Y++ ++        +K+G G +G VY+G  +  ++ VAV  L  ++ + E EF+ E A 
Sbjct: 4   NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAV 62
Query: 84  MANINICHENLVKLHGGCIDGPS 106
           M  I   H NLV+L G C   P 
Sbjct: 63  MKEIK--HPNLVQLLGVCTREPP 83

>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A Dfg-Out Inhibitor Ap24534 Length = 284

Iteration: 1
 Score = 41.6 bits (96), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 27/83 (32%), Positives = 44/83 (53%), Gaps = 4/83 (4%)
Query: 25  SYNELKIATNGFRTSNKIGEGGFGSVYKGRLEDGTV-VAVNVLSVESKQGETEFMSEVAS 83
           +Y++ ++        +K+G G +G VY+G  +  ++ VAV  L  ++ + E EF+ E A 
Sbjct: 4   NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAV 62
Query: 84  MANINICHENLVKLHGGCIDGPS 106
           M  I   H NLV+L G C   P 
Sbjct: 63  MKEIK--HPNLVQLLGVCTREPP 83

>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound With Ppy-A Length = 288

Iteration: 1
 Score = 41.6 bits (96), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 27/83 (32%), Positives = 44/83 (53%), Gaps = 4/83 (4%)
Query: 25  SYNELKIATNGFRTSNKIGEGGFGSVYKGRLEDGTV-VAVNVLSVESKQGETEFMSEVAS 83
           +Y++ ++        +K+G G +G VY+G  +  ++ VAV  L  ++ + E EF+ E A 
Sbjct: 4   NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAV 62
Query: 84  MANINICHENLVKLHGGCIDGPS 106
           M  I   H NLV+L G C   P 
Sbjct: 63  MKEIK--HPNLVQLLGVCTREPP 83

>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase Catalytic Domain Complexed With Type Ii Inhibitor Length = 287

Iteration: 1
 Score = 41.6 bits (96), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 27/83 (32%), Positives = 44/83 (53%), Gaps = 4/83 (4%)
Query: 25  SYNELKIATNGFRTSNKIGEGGFGSVYKGRLEDGTV-VAVNVLSVESKQGETEFMSEVAS 83
           +Y++ ++        +K+G G +G VY+G  +  ++ VAV  L  ++ + E EF+ E A 
Sbjct: 6   NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAV 64
Query: 84  MANINICHENLVKLHGGCIDGPS 106
           M  I   H NLV+L G C   P 
Sbjct: 65  MKEIK--HPNLVQLLGVCTREPP 85

>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant Abl Mutant In Complex With The Aurora Kinase Inhibitor Vx-680 Length = 287

Iteration: 1
 Score = 41.6 bits (96), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 27/83 (32%), Positives = 44/83 (53%), Gaps = 4/83 (4%)
Query: 25  SYNELKIATNGFRTSNKIGEGGFGSVYKGRLEDGTV-VAVNVLSVESKQGETEFMSEVAS 83
           +Y++ ++        +K+G G +G VY+G  +  ++ VAV  L  ++ + E EF+ E A 
Sbjct: 5   NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAV 63
Query: 84  MANINICHENLVKLHGGCIDGPS 106
           M  I   H NLV+L G C   P 
Sbjct: 64  MKEIK--HPNLVQLLGVCTREPP 84

>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With The Inhibitor Pha-739358 Length = 286

Iteration: 1
 Score = 41.6 bits (96), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 27/83 (32%), Positives = 44/83 (53%), Gaps = 4/83 (4%)
Query: 25  SYNELKIATNGFRTSNKIGEGGFGSVYKGRLEDGTV-VAVNVLSVESKQGETEFMSEVAS 83
           +Y++ ++        +K+G G +G VY+G  +  ++ VAV  L  ++ + E EF+ E A 
Sbjct: 5   NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAV 63
Query: 84  MANINICHENLVKLHGGCIDGPS 106
           M  I   H NLV+L G C   P 
Sbjct: 64  MKEIK--HPNLVQLLGVCTREPP 84

>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal Sh3 Domain Length = 341

Iteration: 1
 Score = 41.2 bits (95), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 28/99 (28%), Positives = 51/99 (51%), Gaps = 12/99 (12%)
Query: 31  IATNGFRTSNKIGEGGFGSVYKGRLE--DGTVVAVNVLSVES-----KQGETEFMSEVAS 83
           I     R   K+G+G FG V +G  +   G  V+V V  ++       +   +F+ EV +
Sbjct: 9   IGEKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNA 68
Query: 84  MANINICHENLVKLHGGCIDGPSRI---LAPLQASIEAL 119
           M +++  H NL++L+G  +  P ++   LAPL + ++ L
Sbjct: 69  MHSLD--HRNLIRLYGVVLTPPMKMVTELAPLGSLLDRL 105

>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of The Tyrosine Kinase Ack1 Length = 291

Iteration: 1
 Score = 41.2 bits (95), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 28/99 (28%), Positives = 51/99 (51%), Gaps = 12/99 (12%)
Query: 31  IATNGFRTSNKIGEGGFGSVYKGRLE--DGTVVAVNVLSVES-----KQGETEFMSEVAS 83
           I     R   K+G+G FG V +G  +   G  V+V V  ++       +   +F+ EV +
Sbjct: 15  IGEKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNA 74
Query: 84  MANINICHENLVKLHGGCIDGPSRI---LAPLQASIEAL 119
           M +++  H NL++L+G  +  P ++   LAPL + ++ L
Sbjct: 75  MHSLD--HRNLIRLYGVVLTPPMKMVTELAPLGSLLDRL 111

>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And Unphosphorylated Kinase Domains Of The Cdc42-Associated Tyrosine Kinase Ack1 Bound To Amp-Pcp Length = 291

Iteration: 1
 Score = 41.2 bits (95), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 28/99 (28%), Positives = 51/99 (51%), Gaps = 12/99 (12%)
Query: 31  IATNGFRTSNKIGEGGFGSVYKGRLE--DGTVVAVNVLSVES-----KQGETEFMSEVAS 83
           I     R   K+G+G FG V +G  +   G  V+V V  ++       +   +F+ EV +
Sbjct: 15  IGEKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNA 74
Query: 84  MANINICHENLVKLHGGCIDGPSRI---LAPLQASIEAL 119
           M +++  H NL++L+G  +  P ++   LAPL + ++ L
Sbjct: 75  MHSLD--HRNLIRLYGVVLTPPMKMVTELAPLGSLLDRL 111

>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In Rodent Cancer Tumor Models Length = 297

Iteration: 1
 Score = 41.2 bits (95), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 35/139 (25%), Positives = 59/139 (42%), Gaps = 24/139 (17%)
Query: 41  KIGEGGFGSVYKGRL------EDGTVVAVNVLSVESKQGETEFMSEVASMANINICHENL 94
           ++GEG FG V+          +D  +VAV  L   +     +F  E   + N+   HE++
Sbjct: 22  ELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQ--HEHI 79
Query: 95  VKLHGGCIDGPSRILAPLQASIEALFLFTKLWKMDKFIS-------IYVVSGSKKNRVKF 147
           VK +G C DG   I+         +F + K   ++KF+        I V    ++ + + 
Sbjct: 80  VKFYGVCGDGDPLIM---------VFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGEL 130
Query: 148 NWIARREIALGIARGLAYI 166
                  IA  IA G+ Y+
Sbjct: 131 GLSQMLHIASQIASGMVYL 149

>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights Into Receptor Autoregulation Length = 343

Iteration: 1
 Score = 41.2 bits (95), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 45/157 (28%), Positives = 66/157 (42%), Gaps = 33/157 (21%)
Query: 34  NGFRTSNKIGEGGFGSVYKGR------LEDGTVVAVNVLSVE-SKQGETEFMSEVASMAN 86
           N       IGEG FG V++ R       E  T+VAV +L  E S   + +F  E A MA 
Sbjct: 47  NNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAE 106
Query: 87  INICHENLVKLHGGCIDGPSRILAPLQASIEALFLFTKLWKMDKFI---SIYVVSG---- 139
            +  + N+VKL G C  G    L         LF +     +++F+   S + V      
Sbjct: 107 FD--NPNIVKLLGVCAVGKPMCL---------LFEYMAYGDLNEFLRSMSPHTVCSLSHS 155
Query: 140 --SKKNRV------KFNWIARREIALGIARGLAYIHE 168
             S + RV        +   +  IA  +A G+AY+ E
Sbjct: 156 DLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSE 192

>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With Staurosporine Length = 309

Iteration: 1
 Score = 40.8 bits (94), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 37/143 (25%), Positives = 60/143 (41%), Gaps = 20/143 (13%)
Query: 27  NELKIATNGFRTSNKIGEGGFGSVYKGRLEDGTVVAVNVLSVESKQGE--TEFMSEVASM 84
           +++ I         KIG G FG+V++     G+ VAV +L  +    E   EF+ EVA M
Sbjct: 30  DDMDIPWCDLNIKEKIGAGSFGTVHRAEWH-GSDVAVKILMEQDFHAERVNEFLREVAIM 88
Query: 85  ANINICHENLVKLHGGCIDGPSRILAPLQASIEALFLFTKLWKMDKFISIYVVSGSKKNR 144
             +   H N+V   G        +  P   SI   +L           S+Y +      R
Sbjct: 89  KRLR--HPNIVLFMGA-------VTQPPNLSIVTEYLSRG--------SLYRLLHKSGAR 131
Query: 145 VKFNWIARREIALGIARGLAYIH 167
            + +   R  +A  +A+G+ Y+H
Sbjct: 132 EQLDERRRLSMAYDVAKGMNYLH 154

>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex With Small Molecule Fragment Length = 293

Iteration: 1
 Score = 40.4 bits (93), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 27/84 (32%), Positives = 44/84 (52%), Gaps = 4/84 (4%)
Query: 24  ISYNELKIATNGFRTSNKIGEGGFGSVYKGRLEDGTV-VAVNVLSVESKQGETEFMSEVA 82
           +S ++ ++        +K+G G +G VY+G  +  ++ VAV  L  ++ + E EF+ E A
Sbjct: 1   MSLDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAA 59
Query: 83  SMANINICHENLVKLHGGCIDGPS 106
            M  I   H NLV+L G C   P 
Sbjct: 60  VMKEIK--HPNLVQLLGVCTREPP 81

>pdb|2Y4I|B Chain B, Ksr2-Mek1 Heterodimer Length = 319

Iteration: 1
 Score = 40.4 bits (93), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 42/148 (28%), Positives = 59/148 (39%), Gaps = 23/148 (15%)
Query: 22  SKISYNELKIATNGFRTSNKIGEGGFGSVYKGRLEDGTVVAVNVLSVESKQGET--EFMS 79
           + I   E  I          IG+G FG VY GR      VA+ ++ +E    +    F  
Sbjct: 21  TSIFLQEWDIPFEQLEIGELIGKGRFGQVYHGRWHGE--VAIRLIDIERDNEDQLKAFKR 78
Query: 80  EVASMANINICHENLVKLHGGCIDGPSRILAPLQASIEALFLFTKLWKMDKFISIYVVSG 139
           EV  MA     HEN+V   G C+  P             L + T L K     ++Y V  
Sbjct: 79  EV--MAYRQTRHENVVLFMGACMSPPH------------LAIITSLCKGR---TLYSVVR 121
Query: 140 SKKNRVKFNWIARREIALGIARGLAYIH 167
             K  +  N    R+IA  I +G+ Y+H
Sbjct: 122 DAKIVLDVN--KTRQIAQEIVKGMGYLH 147

>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In Complex With Staurosporine Length = 309

Iteration: 1
 Score = 40.4 bits (93), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 37/143 (25%), Positives = 60/143 (41%), Gaps = 20/143 (13%)
Query: 27  NELKIATNGFRTSNKIGEGGFGSVYKGRLEDGTVVAVNVLSVESKQGE--TEFMSEVASM 84
           +++ I         KIG G FG+V++     G+ VAV +L  +    E   EF+ EVA M
Sbjct: 30  DDMDIPWCDLNIKEKIGAGSFGTVHRAEWH-GSDVAVKILMEQDFHAERVNEFLREVAIM 88
Query: 85  ANINICHENLVKLHGGCIDGPSRILAPLQASIEALFLFTKLWKMDKFISIYVVSGSKKNR 144
             +   H N+V   G        +  P   SI   +L           S+Y +      R
Sbjct: 89  KRLR--HPNIVLFMGA-------VTQPPNLSIVTEYLSRG--------SLYRLLHKSGAR 131
Query: 145 VKFNWIARREIALGIARGLAYIH 167
            + +   R  +A  +A+G+ Y+H
Sbjct: 132 EQLDERRRLSMAYDVAKGMNYLH 154

>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine Kinase Length = 495

Iteration: 1
 Score = 40.0 bits (92), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 27/83 (32%), Positives = 44/83 (53%), Gaps = 4/83 (4%)
Query: 25  SYNELKIATNGFRTSNKIGEGGFGSVYKGRLEDGTV-VAVNVLSVESKQGETEFMSEVAS 83
           +Y++ ++        +K+G G +G VY+G  +  ++ VAV  L  ++ + E EF+ E A 
Sbjct: 211 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAV 269
Query: 84  MANINICHENLVKLHGGCIDGPS 106
           M  I   H NLV+L G C   P 
Sbjct: 270 MKEIK--HPNLVQLLGVCTREPP 290

>pdb|3Q4T|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a) Kinase Domain In Complex With Dorsomorphin Length = 322

Iteration: 1
 Score = 40.0 bits (92), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 40/130 (30%), Positives = 63/130 (48%), Gaps = 27/130 (20%)
Query: 45  GGFGSVYKGRLEDGTVVAVNVLSVESKQG-ETEFMSEVASMANINICHENLVKLHGGCID 103
           G FG V+K +L +   VAV +  ++ KQ  + E+  EV S+  +   HEN+++  G    
Sbjct: 35  GRFGCVWKAQLLN-EYVAVKIFPIQDKQSWQNEY--EVYSLPGMK--HENILQFIGAEKR 89
Query: 104 GPSRILAPLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARRE---IALGIA 160
           G S              +   LW     I+ +   GS  + +K N ++  E   IA  +A
Sbjct: 90  GTS--------------VDVDLW----LITAFHEKGSLSDFLKANVVSWNELCHIAETMA 131
Query: 161 RGLAYIHEEI 170
           RGLAY+HE+I
Sbjct: 132 RGLAYLHEDI 141

>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine Kinase Length = 537

Iteration: 1
 Score = 40.0 bits (92), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 27/83 (32%), Positives = 44/83 (53%), Gaps = 4/83 (4%)
Query: 25  SYNELKIATNGFRTSNKIGEGGFGSVYKGRLEDGTV-VAVNVLSVESKQGETEFMSEVAS 83
           +Y++ ++        +K+G G +G VY+G  +  ++ VAV  L  ++ + E EF+ E A 
Sbjct: 250 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAV 308
Query: 84  MANINICHENLVKLHGGCIDGPS 106
           M  I   H NLV+L G C   P 
Sbjct: 309 MKEIK--HPNLVQLLGVCTREPP 329

>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex With Small Molecule Fragment Length = 277

Iteration: 1
 Score = 40.0 bits (92), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 27/83 (32%), Positives = 43/83 (51%), Gaps = 4/83 (4%)
Query: 25  SYNELKIATNGFRTSNKIGEGGFGSVYKGRLEDGTV-VAVNVLSVESKQGETEFMSEVAS 83
           S ++ ++        +K+G G +G VY+G  +  ++ VAV  L  ++ + E EF+ E A 
Sbjct: 2   SLDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAV 60
Query: 84  MANINICHENLVKLHGGCIDGPS 106
           M  I   H NLV+L G C   P 
Sbjct: 61  MKEIK--HPNLVQLLGVCTREPP 81

>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And Nck-Interacting Kinase With Wee1chk1 Inhibitor Length = 326

Iteration: 1
 Score = 39.7 bits (91), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 39/155 (25%), Positives = 67/155 (43%), Gaps = 25/155 (16%)
Query: 21  FSKISYNELKIATNGFRTSNKIGEGGFGSVYKGR-LEDGTVVAVNVLSVESKQGETEFMS 79
             +I  + L+     F     +G G +G VYKGR ++ G + A+ V+ V   + E E   
Sbjct: 11  LDEIDLSALRDPAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDE-EEEIKQ 69
Query: 80  EVASMANINICHENLVKLHGGCI--DGPSRILAPLQASIEALFLFTKLWKMDKFIS---- 133
           E+ +M      H N+   +G  I  + P               +  +LW + +F      
Sbjct: 70  EI-NMLKKYSHHRNIATYYGAFIKKNPPG--------------MDDQLWLVMEFCGAGSV 114
Query: 134 IYVVSGSKKNRVKFNWIARREIALGIARGLAYIHE 168
             ++  +K N +K  WIA   I   I RGL+++H+
Sbjct: 115 TDLIKNTKGNTLKEEWIAY--ICREILRGLSHLHQ 147

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	174
3uim_A	326	Brassinosteroid insensitive 1-associated receptor;	1e-50
2qkw_B	321	Protein kinase; three-helix bundle motif, AVRPTO-P	1e-45
2nru_A	307	Interleukin-1 receptor-associated kinase 4; inhibi	7e-42
3soc_A	322	Activin receptor type-2A; structural genomics cons	2e-25
3g2f_A	336	Bone morphogenetic protein receptor type-2; kinase	3e-24
3kmu_A	271	ILK, integrin-linked kinase; cell adhesion, ANK re	9e-21
4f0f_A	287	Serine/threonine-protein kinase ROCO4; LRRK2, ATP-	3e-20
3p86_A	309	Serine/threonine-protein kinase CTR1; ETR1, ERS1,	2e-19
3s95_A	310	LIMK-1, LIM domain kinase 1; structural genomics,	6e-19
2y4i_B	319	KSR2, HKSR2, kinase suppressor of RAS 2; transfera	3e-18
2eva_A	307	TAK1 kinase - TAB1 chimera fusion protein; transfe	3e-18
3dtc_A	271	Mitogen-activated protein kinase kinase kinase 9;	8e-18
3lb7_A	307	RAF proto-oncogene serine/threonine-protein kinas;	2e-17
3mdy_A	337	Bone morphogenetic protein receptor type-1B; compl	1e-16
3og7_A	289	AKAP9-BRAF fusion protein; proto-oncogene, V600E,	1e-16
3q4u_A	301	Activin receptor type-1; structural genomics conso	1e-16
3gxj_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	6e-16
1b6c_B	342	TGF-B superfamily receptor type I; complex (isomer	8e-16
3lzb_A	327	Epidermal growth factor receptor; epidermal growth	8e-15
3lxl_A	327	Tyrosine-protein kinase JAK3; TYK2, inflammation,	1e-14
3cbl_A	377	C-FES, proto-oncogene tyrosine-protein kinase FES/	1e-14
2w1i_A	326	JAK2; chromosomal rearrangement, nucleotide-bindin	3e-14
3ugc_A	295	Tyrosine-protein kinase JAK2; small molecule inhib	3e-14
3poz_A	327	Epidermal growth factor receptor; kinase domain, a	7e-14
4e5w_A	302	Tyrosine-protein kinase JAK1; kinase domain, trans	2e-13
3kex_A	325	Receptor tyrosine-protein kinase ERBB-3; kinase do	2e-13
2ozo_A	613	Tyrosine-protein kinase ZAP-70; inactive ZAP-70, t	6e-13
3lxp_A	318	Non-receptor tyrosine-protein kinase TYK2; JAK3, i	8e-13
1u59_A	287	Tyrosine-protein kinase ZAP-70; transferase; HET:	9e-13
1t4h_A	290	Serine/threonine-protein kinase WNK1; protein seri	1e-12
1u46_A	291	ACK-1, activated CDC42 kinase 1; tyrosine kinase,	1e-12
2j0j_A	656	Focal adhesion kinase 1; cell migration, FERM, tra	2e-12
3t9t_A	267	Tyrosine-protein kinase ITK/TSK; kinase domain, al	2e-12
3gen_A	283	Tyrosine-protein kinase BTK; bruton'S tyrosine kin	4e-12
3sxs_A	268	Cytoplasmic tyrosine-protein kinase BMX; transfera	5e-12
4fvq_A	289	Tyrosine-protein kinase JAK2; janus protein kinase	6e-12
3v5q_A	297	NT-3 growth factor receptor; kinase domain, kinase	9e-12
4aoj_A	329	High affinity nerve growth factor receptor; transf	1e-11
2qol_A	373	Ephrin receptor; receptor tyrosine kinase, juxtame	1e-11
3cc6_A	281	Protein tyrosine kinase 2 beta; focal adhesion kin	1e-11
1qpc_A	279	LCK kinase; alpha beta fold, transferase; HET: PTR	2e-11
1qcf_A	454	Haematopoetic cell kinase (HCK); tyrosine kinase-i	2e-11
3f66_A	298	Hepatocyte growth factor receptor; C-Met, protein	2e-11
1mp8_A	281	Focal adhesion kinase 1; tyrosine protein kinase,	2e-11
3brb_A	313	Proto-oncogene tyrosine-protein kinase MER; ATP-bi	2e-11
2h8h_A	535	Proto-oncogene tyrosine-protein kinase SRC; SRC ki	3e-11
1xbb_A	291	Tyrosine-protein kinase SYK; gleevec, STI-571, ima	4e-11
3c1x_A	373	Hepatocyte growth factor receptor; receptor tyrosi	4e-11
2c30_A	321	Serine/threonine-protein kinase PAK 6; CRIB domain	4e-11
3kul_A	325	Ephrin type-A receptor 8; ATP-binding, kinase, nuc	5e-11
3kfa_A	288	Tyrosine-protein kinase ABL1; CML, drug resistance	5e-11
1fvr_A	327	Tyrosine-protein kinase TIE-2; tyrosine kinase, tr	7e-11
1fmk_A	452	C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyros	7e-11
3fxz_A	297	Serine/threonine-protein kinase PAK 1; transferase	7e-11
1byg_A	278	CSK, protein (C-terminal SRC kinase); protein kina	9e-11
3pls_A	298	Macrophage-stimulating protein receptor; protein k	1e-10
3a7i_A	303	MST3 kinase, serine/threonine kinase 24 (STE20 hom	1e-10
2yfx_A	327	Tyrosine-protein kinase receptor; nucleotide-bindi	1e-10
1opk_A	495	P150, C-ABL, proto-oncogene tyrosine-protein kinas	1e-10
3qup_A	323	Tyrosine-protein kinase receptor TYRO3; protein ki	1e-10
1k9a_A	450	Carboxyl-terminal SRC kinase; COOH-terminal SRC ki	2e-10
3l9p_A	367	Anaplastic lymphoma kinase; kinase domain, ATP-bin	2e-10
2pvf_A	334	Fibroblast growth factor receptor 2; kinase domain	2e-10
1p4o_A	322	Insulin-like growth factor I receptor protein; IGF	2e-10
1mqb_A	333	Ephrin type-A receptor 2; tyrosine protein kinase,	2e-10
2ivs_A	314	Proto-oncogene tyrosine-protein kinase receptor RE	2e-10
1luf_A	343	Muscle-specific tyrosine kinase receptor MUSK; pho	2e-10
2xir_A	316	Vascular endothelial growth factor receptor 2; ang	2e-10
2psq_A	370	Fibroblast growth factor receptor 2; kinase domain	3e-10
3zzw_A	289	Tyrosine-protein kinase transmembrane receptor RO;	3e-10
1t46_A	313	HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcom	5e-10
3tt0_A	382	Basic fibroblast growth factor receptor 1; kinase	5e-10
2j7t_A	302	Serine/threonine-protein kinase 10; transferase, A	7e-10
1rjb_A	344	FL cytokine receptor; kinase, structure, autoinhib	1e-09
2i1m_A	333	Macrophage colony-stimulating factor 1 receptor; k	1e-09
2x7f_A	326	TRAF2 and NCK-interacting protein kinase; serine/t	2e-09
3cek_A	313	Dual specificity protein kinase TTK; HMPS1, PYT, E	5e-09
3dbq_A	343	Dual specificity protein kinase TTK; MPS1 structur	6e-09
3ll6_A	337	Cyclin G-associated kinase; transferase, protein k	6e-09
2buj_A	317	Serine/threonine-protein kinase 16; transferase, A	7e-09
2clq_A	295	Mitogen-activated protein kinase kinase kinase 5;	9e-09
1zy4_A	303	Serine/threonine-protein kinase GCN2; translation	1e-08
2vwi_A	303	Serine/threonine-protein kinase OSR1; STE kinase,	2e-08
1u5q_A	348	Serine/threonine protein kinase TAO2; transferase;	2e-08
2zmd_A	390	Dual specificity protein kinase TTK; MPS1, T686A,	3e-08
3p1a_A	311	MYT1 kinase, membrane-associated tyrosine- and thr	3e-08
3dzo_A	413	Rhoptry kinase domain; parasitic disease, transfer	5e-08
1x8b_A	289	WEE1HU, WEE1-like protein kinase; cell cycle, tran	7e-08
4g31_A	299	Eukaryotic translation initiation factor 2-alpha;	8e-08
3aln_A	327	Dual specificity mitogen-activated protein kinase;	9e-08
2wqm_A	310	Serine/threonine-protein kinase NEK7; ATP-binding,	9e-08
2vuw_A	336	Serine/threonine-protein kinase haspin; cell cycle	1e-07
3gni_B	389	Strad alpha; kinase fold, pseudokinase, alpha heli	1e-07
3com_A	314	Serine/threonine-protein kinase 4; MST1, STE20-lik	1e-07
3an0_A	340	Dual specificity mitogen-activated protein kinase;	2e-07
3fme_A	290	Dual specificity mitogen-activated protein kinase;	2e-07
3byv_A	377	Rhoptry kinase; malaria, transferase, structural g	3e-07
4g3f_A	336	NF-kappa-beta-inducing kinase; non-RD kinase, prot	3e-07
3q60_A	371	ROP5B; pseudokinase, transferase; HET: ATP; 1.72A	6e-07
2a19_B	284	Interferon-induced, double-stranded RNA-activated	9e-07
3vhe_A	359	Vascular endothelial growth factor receptor 2; kin	1e-06
4euu_A	319	Serine/threonine-protein kinase TBK1; ATP binding,	1e-06
3g33_A	308	Cell division protein kinase 4; Ser/Thr protein ki	3e-06
4eut_A	396	Serine/threonine-protein kinase TBK1; ATP binding,	3e-06
4apc_A	350	Serine/threonine-protein kinase NEK1; transferase;	4e-06
2owb_A	335	Serine/threonine-protein kinase PLK1; catalytic do	5e-06
2rku_A	294	Serine/threonine-protein kinase PLK1; structure of	7e-06
2pmi_A	317	Negative RE, cyclin-dependent protein kinase PHO85	9e-06
1ua2_A	346	CAK, cell division protein kinase 7; cell cycle, p	1e-05
3qd2_B	332	Eukaryotic translation initiation factor 2-alpha;	1e-05
2dyl_A	318	Dual specificity mitogen-activated protein kinase	2e-05
2x4f_A	373	Myosin light chain kinase family member 4; LUNG, b	2e-05
3p23_A	432	Serine/threonine-protein kinase/endoribonuclease;	2e-05
3cok_A	278	Serine/threonine-protein kinase PLK4; POLO-like ki	2e-05
2w5a_A	279	Serine/threonine-protein kinase NEK2; Ser/Thr prot	2e-05
3qa8_A	676	MGC80376 protein; kinase ubiquitin-like domain, ph	2e-05
3eqc_A	360	Dual specificity mitogen-activated protein kinase;	3e-05
1kob_A	387	Twitchin; kinase, intrasteric regulation; 2.30A {A	3e-05
2iwi_A	312	Serine/threonine-protein kinase PIM-2; nucleotide-	3e-05
3niz_A	311	Rhodanese family protein; structural genomics, str	3e-05
2pzi_A	681	Probable serine/threonine-protein kinase PKNG; ATP	3e-05
4aaa_A	331	Cyclin-dependent kinase-like 2; transferase, phosp	4e-05
3uto_A	573	Twitchin; kinase, muscle sarcomere, transferase; H	5e-05
4agu_A	311	Cyclin-dependent kinase-like 1; transferase, phosp	6e-05
1ob3_A	288	PFPK5, cell division control protein 2 homolog; tr	6e-05
3o0g_A	292	Cell division protein kinase 5; kinase activator c	7e-05
2v62_A	345	Serine/threonine-protein kinase VRK2; transferase,	8e-05
2r3i_A	299	Cell division protein kinase 2; serine/threonine-p	8e-05
3gbz_A	329	Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-	8e-05
3nyv_A	484	Calmodulin-domain protein kinase 1; serine/threoni	8e-05
3mtl_A	324	Cell division protein kinase 16; pctaire1, indirub	1e-04
3fdn_A	279	Serine/threonine-protein kinase 6; aurora kinase i	1e-04
3e7e_A	365	HBUB1, BUB1A, mitotic checkpoint serine/threonine-	1e-04
2jam_A	304	Calcium/calmodulin-dependent protein kinase type 1	1e-04
3uqc_A	286	Probable conserved transmembrane protein; structur	2e-04
3mi9_A	351	Cell division protein kinase 9; P-TEFB, HIV-1, pro	2e-04
3rgf_A	405	Cyclin-dependent kinase 8; protein kinase complex,	2e-04
3sv0_A	483	Casein kinase I-like; typical kinase domain fold,	3e-04
1blx_A	326	Cyclin-dependent kinase 6; inhibitor protein, cycl	3e-04
2vgo_A	284	Serine/threonine-protein kinase 12-A; nucleotide-b	3e-04
3a99_A	320	Proto-oncogene serine/threonine-protein kinase PI;	4e-04
2rio_A	434	Serine/threonine-protein kinase/endoribonuclease I	5e-04
3lij_A	494	Calcium/calmodulin dependent protein kinase with A	5e-04
3mwu_A	486	Calmodulin-domain protein kinase 1; serine/threoni	5e-04
3hko_A	345	Calcium/calmodulin-dependent protein kinase with d	5e-04
1tki_A	321	Titin; serine kinase, muscle, autoinhibition; 2.00	6e-04
3i6u_A	419	CDS1, serine/threonine-protein kinase CHK2; Ser/Th	7e-04
2izr_A	330	Casein kinase I isoform gamma-3; serine/threonine-	8e-04

>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3tl8_A* Length = 326

 Score =  164 bits (417), Expect = 1e-50
 Identities = 53/151 (35%), Positives = 75/151 (49%), Gaps = 25/151 (16%)

Query: 25  SYNELKIATNGFRTSNKIGEGGFGSVYKGRLEDGTVVAVNVLSVESKQG-ETEFMSEVAS 83
           S  EL++A++ F   N +G GGFG VYKGRL DGT+VAV  L  E  QG E +F +EV  
Sbjct: 21  SLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERTQGGELQFQTEVEM 80

Query: 84  MANINICHENLVKLHGGCIDGPSRILA----PLQASIEALFLFTKLWKMDKFISIYVVSG 139
           ++     H NL++L G C+    R+L        +    L                    
Sbjct: 81  ISMAV--HRNLLRLRGFCMTPTERLLVYPYMANGSVASCLR------------------E 120

Query: 140 SKKNRVKFNWIARREIALGIARGLAYIHEEI 170
             +++   +W  R+ IALG ARGLAY+H+  
Sbjct: 121 RPESQPPLDWPKRQRIALGSARGLAYLHDHC 151

>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A* Length = 321

 Score =  151 bits (383), Expect = 1e-45
 Identities = 52/176 (29%), Positives = 74/176 (42%), Gaps = 39/176 (22%)

Query: 11  NYSRKVQGYKFSKISYNELKIATNGFRTSNKIGEGGFGSVYKGRLEDGTVVAVNVLSVES 70
           +Y    + Y+       +L+ ATN F     IG G FG VYKG L DG  VA+   + ES
Sbjct: 19  SYLVPFESYRVP---LVDLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPES 75

Query: 71  KQGETEFMSEVASMANINICHENLVKLHGGCIDGPSRILA-------PLQASIEALFLFT 123
            QG  EF +E+ +++     H +LV L G C +    IL         L+     L+   
Sbjct: 76  SQGIEEFETEIETLSFCR--HPHLVSLIGFCDERNEMILIYKYMENGNLK---RHLY--- 127

Query: 124 KLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEE------IKTT 173
                          GS    +  +W  R EI +G ARGL Y+H        +K+ 
Sbjct: 128 ---------------GSDLPTMSMSWEQRLEICIGAARGLHYLHTRAIIHRDVKSI 168

>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A* Length = 307

 Score =  141 bits (357), Expect = 7e-42
 Identities = 54/173 (31%), Positives = 75/173 (43%), Gaps = 36/173 (20%)

Query: 11  NYSRKVQGYKFSKISYNELKIATNGFR------TSNKIGEGGFGSVYKGRLEDGTVVAVN 64
           N S +V   +F   S+ ELK  TN F         NK+GEGGFG VYKG + + T VAV 
Sbjct: 2   NKSLEVSDTRFHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV-NNTTVAVK 60

Query: 65  VLS----VESKQGETEFMSEVASMANINICHENLVKLHGGCIDGPSRILA----PLQASI 116
            L+    + +++ + +F  E+  MA     HENLV+L G   DG    L     P   S+
Sbjct: 61  KLAAMVDITTEELKQQFDQEIKVMAKCQ--HENLVELLGFSSDGDDLCLVYVYMPN-GSL 117

Query: 117 EALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEE 169
               L                          +W  R +IA G A G+ ++HE 
Sbjct: 118 LD-RLS-----------------CLDGTPPLSWHMRCKIAQGAANGINFLHEN 152

>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 2qlu_A* Length = 322

 Score = 98.6 bits (246), Expect = 2e-25
 Identities = 41/157 (26%), Positives = 62/157 (39%), Gaps = 29/157 (18%)

Query: 22  SKISYNELKIATNGFRTSNKIGEGGFGSVYKGRLEDGTVVAVNVLSVESKQGETEFMSEV 81
             +    L   +   +       G FG V+K +L     VAV +  ++ KQ   +   EV
Sbjct: 12  VDLGTENLYFQSMPLQLLEVKARGRFGCVWKAQL-LNEYVAVKIFPIQDKQSW-QNEYEV 69

Query: 82  ASMANINICHENLVKLHGGCIDGPSRILAPLQASIEALFLFTKLWKMDKFISIYVVSGS- 140
            S+  +   HEN+++  G    G S              +   LW     I+ +   GS 
Sbjct: 70  YSLPGMK--HENILQFIGAEKRGTS--------------VDVDLW----LITAFHEKGSL 109

Query: 141 ----KKNRVKFNWIARREIALGIARGLAYIHEEIKTT 173
               K N V  +W     IA  +ARGLAY+HE+I   
Sbjct: 110 SDFLKANVV--SWNELCHIAETMARGLAYLHEDIPGL 144

>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens} Length = 336

 Score = 95.7 bits (238), Expect = 3e-24
 Identities = 34/150 (22%), Positives = 61/150 (40%), Gaps = 24/150 (16%)

Query: 24  ISYNELKIATNGFRTSNKIGEGGFGSVYKGRLEDGTVVAVNVLSVESKQGETEFMSEVAS 83
            + +E  +  +  +    IG G +G+VYKG L D   VAV V S  ++Q    F++E   
Sbjct: 3   AAASEPSLDLDNLKLLELIGRGRYGAVYKGSL-DERPVAVKVFSFANRQ---NFINEKNI 58

Query: 84  MANINICHENLVKLHGGCIDGPSRILAPLQASIEALFLFTKLWKMDKFISIYVVSGS--- 140
                + H+N+ +   G     +                 +       +  Y  +GS   
Sbjct: 59  YRVPLMEHDNIARFIVGDERVTAD-------------GRMEYL----LVMEYYPNGSLXK 101

Query: 141 KKNRVKFNWIARREIALGIARGLAYIHEEI 170
             +    +W++   +A  + RGLAY+H E+
Sbjct: 102 YLSLHTSDWVSSCRLAHSVTRGLAYLHTEL 131

>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} PDB: 3kmw_A* 3rep_A* Length = 271

 Score = 85.0 bits (211), Expect = 9e-21
 Identities = 32/156 (20%), Positives = 55/156 (35%), Gaps = 38/156 (24%)

Query: 20  KFSKISYNELKIATNGFRTSNKIGEGGFGSVYKGRLEDGTVVAVNVLSVESKQGET--EF 77
           K S I + +L           K+ E   G ++KGR   G  + V VL V         +F
Sbjct: 3   KHSGIDFKQLNF-------LTKLNENHSGELWKGRW-QGNDIVVKVLKVRDWSTRKSRDF 54

Query: 78  MSEVASMANINICHENLVKLHGGCIDGPSRILAPLQASIEALFLFTKLWKMDKFISIYVV 137
             E   +   +  H N++ + G C   P+                         I+ ++ 
Sbjct: 55  NEECPRLRIFS--HPNVLPVLGACQSPPAPHPT--------------------LITHWMP 92

Query: 138 SGS------KKNRVKFNWIARREIALGIARGLAYIH 167
            GS      +      +     + AL +ARG+A++H
Sbjct: 93  YGSLYNVLHEGTNFVVDQSQAVKFALDMARGMAFLH 128

>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A* Length = 287

 Score = 84.3 bits (209), Expect = 3e-20
 Identities = 43/157 (27%), Positives = 68/157 (43%), Gaps = 46/157 (29%)

Query: 24  ISYNELKIATNGFRTSNKIGEGGFGSVYKGR-LEDGTVVAVNVLSVESKQGET------- 75
           ++ NE++          +IG+GGFG V+KGR ++D +VVA+  L +   +GET       
Sbjct: 16  LADNEIEY-------EKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQ 68

Query: 76  EFMSEVASMANINICHENLVKLHGGCIDGPSRILAPLQASIEALFLFTKLWKMDKFISIY 135
           EF  EV  M+N+N  H N+VKL+G   + P  ++       E                 +
Sbjct: 69  EFQREVFIMSNLN--HPNIVKLYGLMHNPPRMVM-------E-----------------F 102

Query: 136 VVSGS-----KKNRVKFNWIARREIALGIARGLAYIH 167
           V  G              W  +  + L IA G+ Y+ 
Sbjct: 103 VPCGDLYHRLLDKAHPIKWSVKLRLMLDIALGIEYMQ 139

>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A* Length = 309

 Score = 82.0 bits (203), Expect = 2e-19
 Identities = 38/148 (25%), Positives = 63/148 (42%), Gaps = 27/148 (18%)

Query: 24  ISYNELKIATNGFRTSNKIGEGGFGSVYKGRLEDGTVVAVNVLSVESKQGET--EFMSEV 81
           I + +L I         KIG G FG+V++     G+ VAV +L  +    E   EF+ EV
Sbjct: 34  IPWCDLNI-------KEKIGAGSFGTVHRAEW-HGSDVAVKILMEQDFHAERVNEFLREV 85

Query: 82  ASMANINICHENLVKLHGGCIDGPSRILAPLQASIEALFLFTKLWKMDKFISIYVVSGSK 141
           A M  +   H N+V   G     P+            L + T+   + +  S+Y +    
Sbjct: 86  AIMKRLR--HPNIVLFMGAVTQPPN------------LSIVTEY--LSRG-SLYRLLHKS 128

Query: 142 KNRVKFNWIARREIALGIARGLAYIHEE 169
             R + +   R  +A  +A+G+ Y+H  
Sbjct: 129 GAREQLDERRRLSMAYDVAKGMNYLHNR 156

>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens} Length = 310

 Score = 80.8 bits (200), Expect = 6e-19
 Identities = 32/151 (21%), Positives = 51/151 (33%), Gaps = 37/151 (24%)

Query: 24  ISYNELKIATNGFRTSNKIGEGGFGSVYKGRL-EDGTVVAVNVLSVESKQGETEFMSEVA 82
              ++L            +G+G FG   K    E G V+ +  L    ++ +  F+ EV 
Sbjct: 7   FRPSDLIH-------GEVLGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVK 59

Query: 83  SMANINICHENLVKLHGGCIDGPSRILAPLQASIEALFLFTKLWKMDKFISIYVVSGS-- 140
            M  +   H N++K  G            L    E                 Y+  G+  
Sbjct: 60  VMRCLE--HPNVLKFIGVLYKDK-----RLNFITE-----------------YIKGGTLR 95

Query: 141 ---KKNRVKFNWIARREIALGIARGLAYIHE 168
              K    ++ W  R   A  IA G+AY+H 
Sbjct: 96  GIIKSMDSQYPWSQRVSFAKDIASGMAYLHS 126

>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens} Length = 319

 Score = 78.9 bits (195), Expect = 3e-18
 Identities = 35/151 (23%), Positives = 57/151 (37%), Gaps = 40/151 (26%)

Query: 24  ISYNELKIATNGFRTSNKIGEGGFGSVYKGRLEDGTVVAVNVLSVESKQGET--EFMSEV 81
           I + +L+I          IG+G FG VY GR   G  VA+ ++ +E    +    F  EV
Sbjct: 30  IPFEQLEI-------GELIGKGRFGQVYHGRW-HGE-VAIRLIDIERDNEDQLKAFKREV 80

Query: 82  ASMANINICHENLVKLHGGCIDGPSRILAPLQASIEALFLFTKLWKMDKFISIYVVSGS- 140
            +       HEN+V   G C+  P             L + T                + 
Sbjct: 81  MAYRQTR--HENVVLFMGACMSPPH------------LAIITS----------LCKGRTL 116

Query: 141 ----KKNRVKFNWIARREIALGIARGLAYIH 167
               +  ++  +    R+IA  I +G+ Y+H
Sbjct: 117 YSVVRDAKIVLDVNKTRQIAQEIVKGMGYLH 147

>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens} Length = 307

 Score = 78.9 bits (195), Expect = 3e-18
 Identities = 32/153 (20%), Positives = 57/153 (37%), Gaps = 43/153 (28%)

Query: 24  ISYNELKIATNGFRTSNKIGEGGFGSVYKGRLEDGTVVAVNVLSVESKQGETEFMSEVAS 83
           I Y E+++          +G G FG V K +      VA+  +  ES+     F+ E+  
Sbjct: 5   IDYKEIEV-------EEVVGRGAFGVVCKAKW-RAKDVAIKQIESESE--RKAFIVELRQ 54

Query: 84  MANINICHENLVKLHGGCIDGPSRILAPLQASIEALFLFTKLWKMDKFISIYVVSGS--- 140
           ++ +N  H N+VKL+G C++               + L  +          Y   GS   
Sbjct: 55  LSRVN--HPNIVKLYGACLN--------------PVCLVME----------YAEGGSLYN 88

Query: 141 ----KKNRVKFNWIARREIALGIARGLAYIHEE 169
                +    +         L  ++G+AY+H  
Sbjct: 89  VLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSM 121

>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} Length = 271

 Score = 77.3 bits (191), Expect = 8e-18
 Identities = 35/153 (22%), Positives = 51/153 (33%), Gaps = 39/153 (25%)

Query: 24  ISYNELKIATNGFRTSNKIGEGGFGSVYKGRLEDGTVVAVNVL----SVESKQGETEFMS 79
           I + EL +          IG GGFG VY+     G  VAV         +  Q       
Sbjct: 4   IDFAELTLE-------EIIGIGGFGKVYRAFW-IGDEVAVKAARHDPDEDISQTIENVRQ 55

Query: 80  EVASMANINICHENLVKLHGGCIDGPSRILAPLQASIEALFLFTKLWKMDKFISIYVVSG 139
           E    A +   H N++ L G C+  P+            L L  +          +   G
Sbjct: 56  EAKLFAMLK--HPNIIALRGVCLKEPN------------LCLVME----------FARGG 91

Query: 140 SKKN---RVKFNWIARREIALGIARGLAYIHEE 169
                    +         A+ IARG+ Y+H+E
Sbjct: 92  PLNRVLSGKRIPPDILVNWAVQIARGMNYLHDE 124

>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} Length = 337

 Score = 74.8 bits (184), Expect = 1e-16
 Identities = 32/155 (20%), Positives = 57/155 (36%), Gaps = 36/155 (23%)

Query: 24  ISYNELKIATNGFRTSNKIGEGGFGSVYKGRLEDGTVVAVNVLSVESKQGETEFMSEVAS 83
               ++++         +IG+G +G V+ G+   G  VAV V        E  +  E   
Sbjct: 34  TIAKQIQM-------VKQIGKGRYGEVWMGKW-RGEKVAVKVFF---TTEEASWFRETEI 82

Query: 84  MANINICHENLVKLHGGCIDGPSRILAPLQASIEALFLFTKLWKMDKFISIYVVSGS--- 140
              + + HEN++      I G                  T+L+     I+ Y  +GS   
Sbjct: 83  YQTVLMRHENILGFIAADIKGTGSW--------------TQLY----LITDYHENGSLYD 124

Query: 141 --KKNRVKFNWIARREIALGIARGLAYIHEEIKTT 173
             K      +  +  ++A     GL ++H EI +T
Sbjct: 125 YLKST--TLDAKSMLKLAYSSVSGLCHLHTEIFST 157

>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} PDB: 3c4c_A* 3c4d_A* 3idp_A* 3ii5_A* 3d4q_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 2fb8_A* 4dbn_A* 1uwj_A* 1uwh_A* 3q96_A* Length = 289

 Score = 74.3 bits (183), Expect = 1e-16
 Identities = 33/154 (21%), Positives = 54/154 (35%), Gaps = 47/154 (30%)

Query: 24  ISYNELKIATNGFRTSNKIGEGGFGSVYKGRLEDGTVVAVNVLSVESKQGET--EFMSEV 81
           I   ++ +         +IG G FG+VYKG+   G  VAV +L+V +   +    F +EV
Sbjct: 21  IPDGQITVG-------QRIGSGSFGTVYKGKW-HGD-VAVKMLNVTAPTPQQLQAFKNEV 71

Query: 82  ASMANINICHENLVKLHGGCIDGPSRILAPLQASIEALFLFTKLWKMDKFISI---YVVS 138
             +      H N++   G                                ++I   +   
Sbjct: 72  GVLRKTR--HVNILLFMGYSTAPQ--------------------------LAIVTQWCEG 103

Query: 139 GS-----KKNRVKFNWIARREIALGIARGLAYIH 167
            S       +  KF      +IA   ARG+ Y+H
Sbjct: 104 SSLYHHLHASETKFEMKKLIDIARQTARGMDYLH 137

>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A* Length = 301

 Score = 74.3 bits (183), Expect = 1e-16
 Identities = 33/139 (23%), Positives = 54/139 (38%), Gaps = 29/139 (20%)

Query: 40  NKIGEGGFGSVYKGRLEDGTVVAVNVLSVESKQGETEFMSEVASMANINICHENLVKLHG 99
             +G+G +G V++G    G  VAV + S    + E  +  E      + + HEN++    
Sbjct: 14  ECVGKGRYGEVWRGSW-QGENVAVKIFS---SRDEKSWFRETELYNTVMLRHENILGFIA 69

Query: 100 GCIDGPSRILAPLQASIEALFLFTKLWKMDKFISIYVVSGS-----KKNRVKFNWIARRE 154
             +                    T+LW     I+ Y   GS     +      + ++   
Sbjct: 70  SDMTSRH--------------SSTQLW----LITHYHEMGSLYDYLQLT--TLDTVSCLR 109

Query: 155 IALGIARGLAYIHEEIKTT 173
           I L IA GLA++H EI  T
Sbjct: 110 IVLSIASGLAHLHIEIFGT 128

>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A* Length = 342

 Score = 72.5 bits (178), Expect = 8e-16
 Identities = 36/137 (26%), Positives = 54/137 (39%), Gaps = 25/137 (18%)

Query: 40  NKIGEGGFGSVYKGRLEDGTVVAVNVLSVESKQGETEFMSEVASMANINICHENLVKLHG 99
             IG+G FG V++G+   G  VAV + S    + E  +  E      + + HEN++    
Sbjct: 48  ESIGKGRFGEVWRGKW-RGEEVAVKIFS---SREERSWFREAEIYQTVMLRHENILGFIA 103

Query: 100 GCIDGPSRILAPLQASIEALFLFTKLWKMDKFISIYVVSGSKK---NRVKFNWIARREIA 156
                                 +T+LW     +S Y   GS     NR         ++A
Sbjct: 104 ADNKDNG--------------TWTQLW----LVSDYHEHGSLFDYLNRYTVTVEGMIKLA 145

Query: 157 LGIARGLAYIHEEIKTT 173
           L  A GLA++H EI  T
Sbjct: 146 LSTASGLAHLHMEIVGT 162

>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens} Length = 327

 Score = 69.6 bits (171), Expect = 8e-15
 Identities = 25/138 (18%), Positives = 52/138 (37%), Gaps = 32/138 (23%)

Query: 40  NKIGEGGFGSVYKGRLEDG-----TVVAVNVLSVE-SKQGETEFMSEVASMANINICHEN 93
             +G G FG+VYKG            VA+  L    S +   E + E   MA+++  + +
Sbjct: 21  KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD--NPH 78

Query: 94  LVKLHGGCIDGPSRI---LAPLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWI 150
           + +L G C+    ++   L P                +  ++        ++++      
Sbjct: 79  VCRLLGICLTSTVQLITQLMPFGC-------------LLDYV--------REHKDNIGSQ 117

Query: 151 ARREIALGIARGLAYIHE 168
                 + IA+G+ Y+ +
Sbjct: 118 YLLNWCVQIAKGMNYLED 135

>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 3pjc_A* 1yvj_A* Length = 327

 Score = 68.9 bits (169), Expect = 1e-14
 Identities = 26/139 (18%), Positives = 52/139 (37%), Gaps = 32/139 (23%)

Query: 40  NKIGEGGFGSVYKGRL-----EDGTVVAVNVLSVESKQGETEFMSEVASMANINICHENL 94
           +++G+G FGSV   R        G +VAV  L       + +F  E+  +  ++   + +
Sbjct: 29  SQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALH--SDFI 86

Query: 95  VKLHGGCIDGPSRILAPLQASIEALFLFTKLWKMDKFISIYVVSGS-----KKNRVKFNW 149
           VK  G       +    L+  +E                 Y+ SG      +++R + + 
Sbjct: 87  VKYRGVSYGPGRQ---SLRLVME-----------------YLPSGCLRDFLQRHRARLDA 126

Query: 150 IARREIALGIARGLAYIHE 168
                 +  I +G+ Y+  
Sbjct: 127 SRLLLYSSQICKGMEYLGS 145

>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A* Length = 377

 Score = 69.2 bits (170), Expect = 1e-14
 Identities = 25/135 (18%), Positives = 46/135 (34%), Gaps = 31/135 (22%)

Query: 41  KIGEGGFGSVYKGRLEDGTV-VAVNVLSVE-SKQGETEFMSEVASMANINICHENLVKLH 98
           +IG G FG V+ GRL      VAV           + +F+ E   +   +  H N+V+L 
Sbjct: 121 QIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYS--HPNIVRLI 178

Query: 99  GGCIDGPSRILAPLQASIEALFLFTKLWKMDKFISIYVVSGS-----KKNRVKFNWIARR 153
           G C               + +++  +L  +          G      +    +       
Sbjct: 179 GVCTQK------------QPIYIVMEL--VQG--------GDFLTFLRTEGARLRVKTLL 216

Query: 154 EIALGIARGLAYIHE 168
           ++    A G+ Y+  
Sbjct: 217 QMVGDAAAGMEYLES 231

>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens} Length = 326

 Score = 68.2 bits (167), Expect = 3e-14
 Identities = 32/139 (23%), Positives = 58/139 (41%), Gaps = 32/139 (23%)

Query: 40  NKIGEGGFGSVYKGRLE-----DGTVVAVNVLSVESKQGETEFMSEVASMANINICHENL 94
            ++G+G FGSV   R +      G VVAV  L   +++   +F  E+  + ++   H+N+
Sbjct: 47  QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQ--HDNI 104

Query: 95  VKLHGGCIDGPSRILAPLQASIEALFLFTKLWKMDKFISIYVVSGS-----KKNRVKFNW 149
           VK  G C     R    L+  +E                 Y+  GS     +K++ + + 
Sbjct: 105 VKYKGVCYSAGRR---NLKLIME-----------------YLPYGSLRDYLQKHKERIDH 144

Query: 150 IARREIALGIARGLAYIHE 168
           I   +    I +G+ Y+  
Sbjct: 145 IKLLQYTSQICKGMEYLGT 163

>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 3q32_A* 3rvg_A* 3tjc_A* 3tjd_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* 3io7_A* 3kck_A* 3jy9_A* Length = 295

 Score = 67.7 bits (166), Expect = 3e-14
 Identities = 32/139 (23%), Positives = 58/139 (41%), Gaps = 32/139 (23%)

Query: 40  NKIGEGGFGSVYKGRLE-----DGTVVAVNVLSVESKQGETEFMSEVASMANINICHENL 94
            ++G+G FGSV   R +      G VVAV  L   +++   +F  E+  + ++   H+N+
Sbjct: 16  QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQ--HDNI 73

Query: 95  VKLHGGCIDGPSRILAPLQASIEALFLFTKLWKMDKFISIYVVSGS-----KKNRVKFNW 149
           VK  G C     R    L+  +E                 Y+  GS     +K++ + + 
Sbjct: 74  VKYKGVCYSAGRR---NLKLIME-----------------YLPYGSLRDYLQKHKERIDH 113

Query: 150 IARREIALGIARGLAYIHE 168
           I   +    I +G+ Y+  
Sbjct: 114 IKLLQYTSQICKGMEYLGT 132

>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* 2jiu_A* ... Length = 327

 Score = 67.0 bits (164), Expect = 7e-14
 Identities = 22/135 (16%), Positives = 50/135 (37%), Gaps = 26/135 (19%)

Query: 40  NKIGEGGFGSVYKGRLEDG-----TVVAVNVLSVESKQGE-TEFMSEVASMANINICHEN 93
             +G G FG+VYKG            VA+  L   +      E + E   MA+++  + +
Sbjct: 21  KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD--NPH 78

Query: 94  LVKLHGGCIDGPSRILAPLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARR 153
           + +L G C+    +++                  +  ++        ++++         
Sbjct: 79  VCRLLGICLTSTVQLITQ----------LMPFGCLLDYV--------REHKDNIGSQYLL 120

Query: 154 EIALGIARGLAYIHE 168
              + IA+G+ Y+ +
Sbjct: 121 NWCVQIAKGMNYLED 135

>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 3eyg_A* 3eyh_A* Length = 302

 Score = 65.4 bits (160), Expect = 2e-13
 Identities = 34/140 (24%), Positives = 54/140 (38%), Gaps = 33/140 (23%)

Query: 40  NKIGEGGFGSVYKGRLE-----DGTVVAVNVLSVE-SKQGETEFMSEVASMANINICHEN 93
             +GEG FG V   R +      G  VAV  L  E       +   E+  + N+   HEN
Sbjct: 27  RDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLY--HEN 84

Query: 94  LVKLHGGCIDGPSRILAPLQASIEALFLFTKLWKMDKFISIYVVSGS-----KKNRVKFN 148
           +VK  G C +        ++  +E                 ++ SGS      KN+ K N
Sbjct: 85  IVKYKGICTEDGGN---GIKLIME-----------------FLPSGSLKEYLPKNKNKIN 124

Query: 149 WIARREIALGIARGLAYIHE 168
              + + A+ I +G+ Y+  
Sbjct: 125 LKQQLKYAVQICKGMDYLGS 144

>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A* Length = 325

 Score = 65.4 bits (160), Expect = 2e-13
 Identities = 22/135 (16%), Positives = 51/135 (37%), Gaps = 26/135 (19%)

Query: 40  NKIGEGGFGSVYKGRLEDG-----TVVAVNVLSVE-SKQGETEFMSEVASMANINICHEN 93
             +G G FG+V+KG            V + V+  +  +Q        + ++ +++  H +
Sbjct: 19  KVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLD--HAH 76

Query: 94  LVKLHGGCIDGPSRILAPLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARR 153
           +V+L G C     +++            +  L  +   +        +++R         
Sbjct: 77  IVRLLGLCPGSSLQLVTQ----------YLPLGSLLDHV--------RQHRGALGPQLLL 118

Query: 154 EIALGIARGLAYIHE 168
              + IA+G+ Y+ E
Sbjct: 119 NWGVQIAKGMYYLEE 133

>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens} Length = 613

 Score = 64.6 bits (157), Expect = 6e-13
 Identities = 27/133 (20%), Positives = 47/133 (35%), Gaps = 30/133 (22%)

Query: 41  KIGEGGFGSVYKGRL--EDGTV-VAVNVLSVE-SKQGETEFMSEVASMANINICHENLVK 96
           ++G G FGSV +G        + VA+ VL     K    E M E   M  ++  +  +V+
Sbjct: 343 ELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLD--NPYIVR 400

Query: 97  LHGGCIDGPSRI---LAPLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARR 153
           L G C      +   +A                 + KF+           R +       
Sbjct: 401 LIGVCQAEALMLVMEMAGGGP-------------LHKFL--------VGKREEIPVSNVA 439

Query: 154 EIALGIARGLAYI 166
           E+   ++ G+ Y+
Sbjct: 440 ELLHQVSMGMKYL 452

>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* Length = 318

 Score = 63.9 bits (156), Expect = 8e-13
 Identities = 32/140 (22%), Positives = 52/140 (37%), Gaps = 35/140 (25%)

Query: 40  NKIGEGGFGSVYKGRLED-----GTVVAVNVLSVE-SKQGETEFMSEVASMANINICHEN 93
             +GEG FG V     +      G +VAV  L  +   Q  + +  E+  +  +   HE+
Sbjct: 37  RDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTLY--HEH 94

Query: 94  LVKLHGGCIDGPSRILAPLQASIEALFLFTKLWKMDKFISIYVVSGS-----KKNRVKFN 148
           ++K  G C D  +     LQ  +E                 YV  GS      ++ +   
Sbjct: 95  IIKYKGCCEDAGAA---SLQLVME-----------------YVPLGSLRDYLPRHSIGLA 134

Query: 149 WIARREIALGIARGLAYIHE 168
            +     A  I  G+AY+H 
Sbjct: 135 QL--LLFAQQICEGMAYLHA 152

>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7 Length = 287

 Score = 63.4 bits (155), Expect = 9e-13
 Identities = 27/133 (20%), Positives = 47/133 (35%), Gaps = 30/133 (22%)

Query: 41  KIGEGGFGSVYKGRL--EDGTV-VAVNVLSVE-SKQGETEFMSEVASMANINICHENLVK 96
           ++G G FGSV +G        + VA+ VL     K    E M E   M  ++  +  +V+
Sbjct: 17  ELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLD--NPYIVR 74

Query: 97  LHGGCIDGPSRI---LAPLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARR 153
           L G C      +   +A                 + KF+           R +       
Sbjct: 75  LIGVCQAEALMLVMEMAGGGP-------------LHKFL--------VGKREEIPVSNVA 113

Query: 154 EIALGIARGLAYI 166
           E+   ++ G+ Y+
Sbjct: 114 ELLHQVSMGMKYL 126

>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 3fpq_A Length = 290

 Score = 63.1 bits (154), Expect = 1e-12
 Identities = 26/141 (18%), Positives = 45/141 (31%), Gaps = 29/141 (20%)

Query: 36  FRTSNKIGEGGFGSVYKGR-LEDGTVVAVNVLSVE--SKQGETEFMSEVASMANINICHE 92
            +   +IG G F +VYKG   E    VA   L     +K     F  E   +  +   H 
Sbjct: 28  LKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQ--HP 85

Query: 93  NLVKLHGGCIDGPSRILAPLQASIEALFLFTKLWKMDKFISIYVVSGS-----KKNRVKF 147
           N+V+ +                          +      ++  + SG+     K+ +   
Sbjct: 86  NIVRFYDSWESTVKGK--------------KCIV----LVTELMTSGTLKTYLKRFK-VM 126

Query: 148 NWIARREIALGIARGLAYIHE 168
                R     I +GL ++H 
Sbjct: 127 KIKVLRSWCRQILKGLQFLHT 147

>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B* Length = 291

 Score = 63.0 bits (154), Expect = 1e-12
 Identities = 31/138 (22%), Positives = 58/138 (42%), Gaps = 33/138 (23%)

Query: 41  KIGEGGFGSVYKGRL----EDGTVVAVNVL---SVESKQGETEFMSEVASMANINICHEN 93
           K+G+G FG V +G           VAV  L    +   +   +F+ EV +M +++  H N
Sbjct: 25  KLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLD--HRN 82

Query: 94  LVKLHGGCIDGPSRI---LAPLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWI 150
           L++L+G  +  P ++   LAPL +             +   +        +K++  F   
Sbjct: 83  LIRLYGVVLTPPMKMVTELAPLGS-------------LLDRL--------RKHQGHFLLG 121

Query: 151 ARREIALGIARGLAYIHE 168
                A+ +A G+ Y+  
Sbjct: 122 TLSRYAVQVAEGMGYLES 139

>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A* Length = 656

 Score = 63.3 bits (154), Expect = 2e-12
 Identities = 28/136 (20%), Positives = 47/136 (34%), Gaps = 31/136 (22%)

Query: 41  KIGEGGFGSVYKGRLEDG----TVVAVNVLSVE-SKQGETEFMSEVASMANINICHENLV 95
            IGEG FG V++G           VA+       S     +F+ E  +M   +  H ++V
Sbjct: 397 CIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFD--HPHIV 454

Query: 96  KLHGGCIDGPSRI---LAPLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIAR 152
           KL G   + P  I   L  L               +  F+        +  +   +  + 
Sbjct: 455 KLIGVITENPVWIIMELCTLGE-------------LRSFL--------QVRKFSLDLASL 493

Query: 153 REIALGIARGLAYIHE 168
              A  ++  LAY+  
Sbjct: 494 ILYAYQLSTALAYLES 509

>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A* Length = 267

 Score = 62.2 bits (152), Expect = 2e-12
 Identities = 29/132 (21%), Positives = 51/132 (38%), Gaps = 30/132 (22%)

Query: 40  NKIGEGGFGSVYKGRLEDGTVVAVNVLSVESKQGETEFMSEVASMANINICHENLVKLHG 99
            +IG G FG V+ G   +   VA+  +   +   E +F+ E   M  ++  H  LV+L+G
Sbjct: 14  QEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEE-DFIEEAEVMMKLS--HPKLVQLYG 70

Query: 100 GCIDGPSRILAPLQASIEALFLFTKLWKMDKFISIYVVSGS-----KKNRVKFNWIARRE 154
            C++               + L T+   M+         G      +  R  F       
Sbjct: 71  VCLEQ------------APICLVTEF--MEH--------GCLSDYLRTQRGLFAAETLLG 108

Query: 155 IALGIARGLAYI 166
           + L +  G+AY+
Sbjct: 109 MCLDVCEGMAYL 120

>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A Length = 283

 Score = 61.9 bits (151), Expect = 4e-12
 Identities = 31/148 (20%), Positives = 55/148 (37%), Gaps = 30/148 (20%)

Query: 24  ISYNELKIATNGFRTSNKIGEGGFGSVYKGRLEDGTVVAVNVLSVESKQGETEFMSEVAS 83
           + Y   +I         ++G G FG V  G+      VA+ ++   S   + EF+ E   
Sbjct: 14  LGYGSWEIDPKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSED-EFIEEAKV 72

Query: 84  MANINICHENLVKLHGGCIDGPSRILAPLQASIEALFLFTKLWKMDKFISIYVVSGS--- 140
           M N++  HE LV+L+G C                 +F+ T+   M          G    
Sbjct: 73  MMNLS--HEKLVQLYGVCTKQ------------RPIFIITEY--MAN--------GCLLN 108

Query: 141 --KKNRVKFNWIARREIALGIARGLAYI 166
             ++ R +F      E+   +   + Y+
Sbjct: 109 YLREMRHRFQTQQLLEMCKDVCEAMEYL 136

>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} PDB: 3sxr_A* Length = 268

 Score = 61.4 bits (150), Expect = 5e-12
 Identities = 25/131 (19%), Positives = 48/131 (36%), Gaps = 30/131 (22%)

Query: 41  KIGEGGFGSVYKGRLEDGTVVAVNVLSVESKQGETEFMSEVASMANINICHENLVKLHGG 100
           ++G G FG V  G+ +    VAV ++   S   + EF  E  +M  ++  H  LVK +G 
Sbjct: 15  ELGSGQFGVVKLGKWKGQYDVAVKMIKEGSMSED-EFFQEAQTMMKLS--HPKLVKFYGV 71

Query: 101 CIDGPSRILAPLQASIEALFLFTKLWKMDKFISIYVVSGS-----KKNRVKFNWIARREI 155
           C                 +++ T+   +          G      + +          E+
Sbjct: 72  CSKE------------YPIYIVTEY--ISN--------GCLLNYLRSHGKGLEPSQLLEM 109

Query: 156 ALGIARGLAYI 166
              +  G+A++
Sbjct: 110 CYDVCEGMAFL 120

>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A* Length = 289

 Score = 61.2 bits (149), Expect = 6e-12
 Identities = 29/139 (20%), Positives = 53/139 (38%), Gaps = 37/139 (26%)

Query: 41  KIGEGGFGSVYKGRL--------EDGTVVAVNVLSVESKQGETEFMSEVASMANINICHE 92
            +G+G F  ++KG             T V + VL    +     F    + M+ ++  H+
Sbjct: 15  SLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLS--HK 72

Query: 93  NLVKLHGGCIDGPSRILAPLQASIEALFLFTKLWKMDKFISIYVVSGS-----KKNRVKF 147
           +LV  +G C+ G   IL                      +  +V  GS     KKN+   
Sbjct: 73  HLVLNYGVCVCGDENIL----------------------VQEFVKFGSLDTYLKKNKNCI 110

Query: 148 NWIARREIALGIARGLAYI 166
           N + + E+A  +A  + ++
Sbjct: 111 NILWKLEVAKQLAAAMHFL 129

>3v5q_A NT-3 growth factor receptor; kinase domain, kinase, phosphorylation, transferase-transfer inhibitor complex; HET: 0F4; 2.20A {Homo sapiens} Length = 297

 Score = 60.7 bits (148), Expect = 9e-12
 Identities = 22/71 (30%), Positives = 34/71 (47%), Gaps = 8/71 (11%)

Query: 40  NKIGEGGFGSVYKGRL------EDGTVVAVNVLSVESKQGETEFMSEVASMANINICHEN 93
            ++GEG FG V+          +D  +VAV  L   +     +F  E   + N+   HE+
Sbjct: 21  RELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQ--HEH 78

Query: 94  LVKLHGGCIDG 104
           +VK +G C DG
Sbjct: 79  IVKFYGVCGDG 89

>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens} Length = 329

 Score = 60.8 bits (148), Expect = 1e-11
 Identities = 19/71 (26%), Positives = 33/71 (46%), Gaps = 8/71 (11%)

Query: 40  NKIGEGGFGSVYKGRL------EDGTVVAVNVLSVESKQGETEFMSEVASMANINICHEN 93
            ++GEG FG V+          +D  +VAV  L   S+    +F  E   +  +   H++
Sbjct: 47  WELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQ--HQH 104

Query: 94  LVKLHGGCIDG 104
           +V+  G C +G
Sbjct: 105 IVRFFGVCTEG 115

>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ... Length = 373

 Score = 60.8 bits (148), Expect = 1e-11
 Identities = 31/134 (23%), Positives = 56/134 (41%), Gaps = 24/134 (17%)

Query: 40  NKIGEGGFGSVYKGRL----EDGTVVAVNVLSVE-SKQGETEFMSEVASMANINICHENL 94
             +G G FG V  GRL    +    VA+  L V  +++   +F+ E + M   +  H N+
Sbjct: 51  KVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFD--HPNI 108

Query: 95  VKLHGGCIDGPSRILAPLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARRE 154
           ++L G           P+    E    + +   +D F+        +K+  +F  I    
Sbjct: 109 IRLEGVVTKSK-----PVMIVTE----YMENGSLDSFL--------RKHDAQFTVIQLVG 151

Query: 155 IALGIARGLAYIHE 168
           +  GIA G+ Y+ +
Sbjct: 152 MLRGIASGMKYLSD 165

>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A* Length = 281

 Score = 60.3 bits (147), Expect = 1e-11
 Identities = 31/136 (22%), Positives = 55/136 (40%), Gaps = 31/136 (22%)

Query: 41  KIGEGGFGSVYKGRL----EDGTVVAVNVLSVE-SKQGETEFMSEVASMANINICHENLV 95
            +GEG FG VY+G       +   VAV     + +   + +FMSE   M N++  H ++V
Sbjct: 19  ILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLD--HPHIV 76

Query: 96  KLHGGCIDGPSRI---LAPLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIAR 152
           KL G   + P+ I   L P                +  ++        ++N+     +  
Sbjct: 77  KLIGIIEEEPTWIIMELYPYGE-------------LGHYL--------ERNKNSLKVLTL 115

Query: 153 REIALGIARGLAYIHE 168
              +L I + +AY+  
Sbjct: 116 VLYSLQICKAMAYLES 131

>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ... Length = 279

 Score = 59.9 bits (146), Expect = 2e-11
 Identities = 20/66 (30%), Positives = 30/66 (45%), Gaps = 3/66 (4%)

Query: 40  NKIGEGGFGSVYKGRLEDGTVVAVNVLSVESKQGETEFMSEVASMANINICHENLVKLHG 99
            ++G G FG V+ G     T VAV  L   S   +  F++E   M  +   H+ LV+L+ 
Sbjct: 19  ERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPD-AFLAEANLMKQLQ--HQRLVRLYA 75

Query: 100 GCIDGP 105
                P
Sbjct: 76  VVTQEP 81

>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B Length = 454

 Score = 60.5 bits (147), Expect = 2e-11
 Identities = 21/69 (30%), Positives = 28/69 (40%), Gaps = 3/69 (4%)

Query: 40  NKIGEGGFGSVYKGRLEDGTVVAVNVLSVESKQGETEFMSEVASMANINICHENLVKLHG 99
            K+G G FG V+       T VAV  +          F++E   M  +   H+ LVKLH 
Sbjct: 194 KKLGAGQFGEVWMATYNKHTKVAVKTM-KPGSMSVEAFLAEANVMKTLQ--HDKLVKLHA 250

Query: 100 GCIDGPSRI 108
                P  I
Sbjct: 251 VVTKEPIYI 259

>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 3q6w_A* 3r7o_A* 3q6u_A* 3cth_A* 3ce3_A* 3ctj_A* ... Length = 298

 Score = 60.0 bits (146), Expect = 2e-11
 Identities = 33/141 (23%), Positives = 54/141 (38%), Gaps = 33/141 (23%)

Query: 40  NKIGEGGFGSVYKGRLEDG----TVVAVNVLSVESKQGE-TEFMSEVASMANINICHENL 94
             IG G FG VY G L D        AV  L+  +  GE ++F++E   M + +  H N+
Sbjct: 31  EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFS--HPNV 88

Query: 95  VKLHGGCI--DGPSRILAPLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIAR 152
           + L G C+  +G   ++ P          + K   +  FI        +           
Sbjct: 89  LSLLGICLRSEGSPLVVLP----------YMKHGDLRNFI--------RNETHNPTVKDL 130

Query: 153 REIALGIARGLAY------IH 167
               L +A+G+ Y      +H
Sbjct: 131 IGFGLQVAKGMKYLASKKFVH 151

>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A* Length = 281

 Score = 59.9 bits (146), Expect = 2e-11
 Identities = 27/138 (19%), Positives = 45/138 (32%), Gaps = 35/138 (25%)

Query: 41  KIGEGGFGSVYKGRLEDG----TVVAVNVLSVE-SKQGETEFMSEVASMANINICHENLV 95
            IGEG FG V++G           VA+       S     +F+ E  +M   +  H ++V
Sbjct: 22  CIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFD--HPHIV 79

Query: 96  KLHGGCIDGPSRILAPLQASIEALFLFTKLWKMDKFISIYVVSGS-----KKNRVKFNWI 150
           KL G   + P  I+  L                          G      +  +   +  
Sbjct: 80  KLIGVITENPVWIIMEL---------------CTL--------GELRSFLQVRKYSLDLA 116

Query: 151 ARREIALGIARGLAYIHE 168
           +    A  ++  LAY+  
Sbjct: 117 SLILYAYQLSTALAYLES 134

>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A* Length = 313

 Score = 59.6 bits (145), Expect = 2e-11
 Identities = 26/79 (32%), Positives = 43/79 (54%), Gaps = 8/79 (10%)

Query: 40  NKIGEGGFGSVYKGRLEDG----TVVAVNVLSVE--SKQGETEFMSEVASMANINICHEN 93
             +GEG FGSV +G L+        VAV  + ++  S++   EF+SE A M + +  H N
Sbjct: 40  KILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFS--HPN 97

Query: 94  LVKLHGGCIDGPSRILAPL 112
           +++L G CI+  S+ +   
Sbjct: 98  VIRLLGVCIEMSSQGIPKP 116

>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 Length = 535

 Score = 59.5 bits (144), Expect = 3e-11
 Identities = 21/69 (30%), Positives = 30/69 (43%), Gaps = 3/69 (4%)

Query: 40  NKIGEGGFGSVYKGRLEDGTVVAVNVLSVESKQGETEFMSEVASMANINICHENLVKLHG 99
            K+G+G FG V+ G     T VA+  L          F+ E   M  +   HE LV+L+ 
Sbjct: 273 VKLGQGCFGEVWMGTWNGTTRVAIKTLK-PGTMSPEAFLQEAQVMKKLR--HEKLVQLYA 329

Query: 100 GCIDGPSRI 108
              + P  I
Sbjct: 330 VVSEEPIYI 338

>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A* Length = 291

 Score = 59.2 bits (144), Expect = 4e-11
 Identities = 26/134 (19%), Positives = 53/134 (39%), Gaps = 32/134 (23%)

Query: 41  KIGEGGFGSVYKGRLEDG---TVVAVNVLSVE--SKQGETEFMSEVASMANINICHENLV 95
           ++G G FG+V KG  +       VAV +L  E      + E ++E   M  ++  +  +V
Sbjct: 24  ELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLD--NPYIV 81

Query: 96  KLHGGCIDGPSRI---LAPLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIAR 152
           ++ G C      +   +A L               ++K++        ++NR        
Sbjct: 82  RMIGICEAESWMLVMEMAELGP-------------LNKYL--------QQNR-HVKDKNI 119

Query: 153 REIALGIARGLAYI 166
            E+   ++ G+ Y+
Sbjct: 120 IELVHQVSMGMKYL 133

>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7 Length = 373

 Score = 59.4 bits (144), Expect = 4e-11
 Identities = 32/141 (22%), Positives = 53/141 (37%), Gaps = 33/141 (23%)

Query: 40  NKIGEGGFGSVYKGRLEDG----TVVAVNVLSVESKQGE-TEFMSEVASMANINICHENL 94
             IG G FG VY G L D        AV  L+  +  GE ++F++E   M + +  H N+
Sbjct: 95  EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFS--HPNV 152

Query: 95  VKLHGGCID--GPSRILAPLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIAR 152
           + L G C+   G   ++ P          + K   +  FI        +           
Sbjct: 153 LSLLGICLRSEGSPLVVLP----------YMKHGDLRNFI--------RNETHNPTVKDL 194

Query: 153 REIALGIARGLAY------IH 167
               L +A+G+ +      +H
Sbjct: 195 IGFGLQVAKGMKFLASKKFVH 215

>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A* Length = 321

 Score = 59.3 bits (144), Expect = 4e-11
 Identities = 36/183 (19%), Positives = 70/183 (38%), Gaps = 40/183 (21%)

Query: 2   HGHSQYSIINYSRKVQGYKFSKISYNELK-----IATNG-----FRTSNKIGEGGFGSVY 51
           H H   S ++   +   ++   +++ + K     +   G       +  KIGEG  G V 
Sbjct: 3   HHHHHSSGVDLGTENLYFQSGVVTHEQFKAALRMVVDQGDPRLLLDSYVKIGEGSTGIVC 62

Query: 52  KGR-LEDGTVVAVNVLSVESKQGETEFMSEVASMANINICHENLVKLHGGCIDGPSRILA 110
             R    G  VAV ++ +  +Q      +EV  M +    H N+V+++   + G      
Sbjct: 63  LAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQ--HFNVVEMYKSYLVG------ 114

Query: 111 PLQASIEALFLFTKLW-KMDKFISIYVVSGSKKNRVKFNWIARREIAL---GIARGLAYI 166
                        +LW  M+     ++  G+  + V    +   +IA     + + LAY+
Sbjct: 115 ------------EELWVLME-----FLQGGALTDIVSQVRLNEEQIATVCEAVLQALAYL 157

Query: 167 HEE 169
           H +
Sbjct: 158 HAQ 160

>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens} Length = 325

 Score = 58.9 bits (143), Expect = 5e-11
 Identities = 27/134 (20%), Positives = 52/134 (38%), Gaps = 24/134 (17%)

Query: 40  NKIGEGGFGSVYKGRL----EDGTVVAVNVLSVE-SKQGETEFMSEVASMANINICHENL 94
             IG G  G V  GRL    +    VA+  L    +++   +F+SE + M   +  H N+
Sbjct: 55  KIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFD--HPNI 112

Query: 95  VKLHGGCIDGPSRILAPLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARRE 154
           ++L G    G            E    + +   +D F+        + +  +F  +    
Sbjct: 113 IRLEGVVTRGR-----LAMIVTE----YMENGSLDTFL--------RTHDGQFTIMQLVG 155

Query: 155 IALGIARGLAYIHE 168
           +  G+  G+ Y+ +
Sbjct: 156 MLRGVGAGMRYLSD 169

>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ... Length = 288

 Score = 58.4 bits (142), Expect = 5e-11
 Identities = 26/67 (38%), Positives = 38/67 (56%), Gaps = 4/67 (5%)

Query: 40  NKIGEGGFGSVYKGRLEDGTV-VAVNVLSVESKQGETEFMSEVASMANINICHENLVKLH 98
           +K+G G +G VY+G  +  ++ VAV  L  ++ + E EF+ E A M  I   H NLV+L 
Sbjct: 19  HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIK--HPNLVQLL 75

Query: 99  GGCIDGP 105
           G C   P
Sbjct: 76  GVCTREP 82

>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A* Length = 327

 Score = 58.4 bits (142), Expect = 7e-11
 Identities = 30/139 (21%), Positives = 51/139 (36%), Gaps = 15/139 (10%)

Query: 40  NKIGEGGFGSVYKGRLEDG---TVVAVNVLSVESKQGE-TEFMSEVASMANINICHENLV 95
           + IGEG FG V K R++        A+  +   + + +  +F  E+  +  +   H N++
Sbjct: 31  DVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLG-HHPNII 89

Query: 96  KLHGGC-IDGPSRILAPLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARRE 154
            L G C   G   +     A    L  F  L K     +    + +       +      
Sbjct: 90  NLLGACEHRGYLYLAIEY-APHGNLLDF--LRKSRVLETDPAFAIANSTASTLSSQQLLH 146

Query: 155 IALGIARGLAY------IH 167
            A  +ARG+ Y      IH
Sbjct: 147 FAADVARGMDYLSQKQFIH 165

>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ... Length = 452

 Score = 58.6 bits (142), Expect = 7e-11
 Identities = 21/69 (30%), Positives = 30/69 (43%), Gaps = 3/69 (4%)

Query: 40  NKIGEGGFGSVYKGRLEDGTVVAVNVLSVESKQGETEFMSEVASMANINICHENLVKLHG 99
            K+G+G FG V+ G     T VA+  L          F+ E   M  +   HE LV+L+ 
Sbjct: 190 VKLGQGCFGEVWMGTWNGTTRVAIKTLK-PGTMSPEAFLQEAQVMKKLR--HEKLVQLYA 246

Query: 100 GCIDGPSRI 108
              + P  I
Sbjct: 247 VVSEEPIYI 255

>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A* Length = 297

 Score = 58.1 bits (141), Expect = 7e-11
 Identities = 26/139 (18%), Positives = 52/139 (37%), Gaps = 30/139 (21%)

Query: 36  FRTSNKIGEGGFGSVYKGR-LEDGTVVAVNVLSVESKQGETEFMSEVASMANINICHENL 94
           +    KIG+G  G+VY    +  G  VA+  ++++ +  +   ++E+  M      + N+
Sbjct: 22  YTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENK--NPNI 79

Query: 95  VKLHGGCIDGPSRILAPLQASIEALFLFTKLW-KMDKFISIYVVSGSKKNRVKFNWIARR 153
           V      + G                   +LW  M+     Y+  GS  + V    +   
Sbjct: 80  VNYLDSYLVG------------------DELWVVME-----YLAGGSLTDVVTETCMDEG 116

Query: 154 EIAL---GIARGLAYIHEE 169
           +IA       + L ++H  
Sbjct: 117 QIAAVCRECLQALEFLHSN 135

>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A* Length = 278

 Score = 58.0 bits (141), Expect = 9e-11
 Identities = 22/71 (30%), Positives = 32/71 (45%), Gaps = 9/71 (12%)

Query: 40  NKIGEGGFGSVYKGRLEDGTVVAVNVLSVESKQGET--EFMSEVASMANINICHENLVKL 97
             IG+G FG V  G    G  VAV  +    K   T   F++E + M  +   H NLV+L
Sbjct: 27  QTIGKGEFGDVMLGDYR-GNKVAVKCI----KNDATAQAFLAEASVMTQLR--HSNLVQL 79

Query: 98  HGGCIDGPSRI 108
            G  ++    +
Sbjct: 80  LGVIVEEKGGL 90

>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} Length = 298

 Score = 58.0 bits (141), Expect = 1e-10
 Identities = 30/142 (21%), Positives = 48/142 (33%), Gaps = 37/142 (26%)

Query: 37  RTSNKIGEGGFGSVYKGRLEDG----TVVAVNVLSVESKQGE-TEFMSEVASMANINICH 91
            +   IG+G FG VY G   D        A+  LS  ++  +   F+ E   M  +N  H
Sbjct: 24  HSDRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLN--H 81

Query: 92  ENLVKLHGGCI--DGPSRILAPLQASIEALFLFTKLWKMDKFISIYVVSGS-----KKNR 144
            N++ L G  +  +G   +L P                M          G      +  +
Sbjct: 82  PNVLALIGIMLPPEGLPHVLLPY---------------MCH--------GDLLQFIRSPQ 118

Query: 145 VKFNWIARREIALGIARGLAYI 166
                       L +ARG+ Y+
Sbjct: 119 RNPTVKDLISFGLQVARGMEYL 140

>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A* Length = 303

 Score = 57.7 bits (140), Expect = 1e-10
 Identities = 36/142 (25%), Positives = 59/142 (41%), Gaps = 31/142 (21%)

Query: 36  FRTSNKIGEGGFGSVYKGR-LEDGTVVAVNVLSVESKQGETE-FMSEVASMANINICHEN 93
           F    KIG+G FG V+KG       VVA+ ++ +E  + E E    E+  ++  +     
Sbjct: 24  FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCD--SPY 81

Query: 94  LVKLHGGCIDGPSRILAPLQASIEALFLFTKLW-KMDKFISIYVVSGSKKNRVKFNWIAR 152
           + K +G  +                    TKLW  M+     Y+  GS  + ++   +  
Sbjct: 82  VTKYYGSYLKD------------------TKLWIIME-----YLGGGSALDLLEPGPLDE 118

Query: 153 REIAL---GIARGLAYIHEEIK 171
            +IA     I +GL Y+H E K
Sbjct: 119 TQIATILREILKGLDYLHSEKK 140

>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A* Length = 327

 Score = 58.1 bits (141), Expect = 1e-10
 Identities = 18/72 (25%), Positives = 32/72 (44%), Gaps = 9/72 (12%)

Query: 40  NKIGEGGFGSVYKGRL------EDGTVVAVNVLSVESKQGE-TEFMSEVASMANINICHE 92
             +G G FG VY+G++           VAV  L     + +  +F+ E   ++  N  H+
Sbjct: 36  RGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFN--HQ 93

Query: 93  NLVKLHGGCIDG 104
           N+V+  G  +  
Sbjct: 94  NIVRCIGVSLQS 105

>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A Length = 495

 Score = 58.2 bits (141), Expect = 1e-10
 Identities = 34/139 (24%), Positives = 56/139 (40%), Gaps = 38/139 (27%)

Query: 40  NKIGEGGFGSVYKGRLEDGTV-VAVNVLSVESKQGET---EFMSEVASMANINICHENLV 95
           +K+G G +G VY+G  +  ++ VAV  L    K+      EF+ E A M  I   H NLV
Sbjct: 226 HKLGGGQYGEVYEGVWKKYSLTVAVKTL----KEDTMEVEEFLKEAAVMKEIK--HPNLV 279

Query: 96  KLHGGCIDGPSRILAPLQASIEALFLFTKLWKMDKFISIYVVSGS------KKNRVKFNW 149
           +L G C   P     P     E                 ++  G+      + NR + + 
Sbjct: 280 QLLGVCTREP-----PFYIITE-----------------FMTYGNLLDYLRECNRQEVSA 317

Query: 150 IARREIALGIARGLAYIHE 168
           +    +A  I+  + Y+ +
Sbjct: 318 VVLLYMATQISSAMEYLEK 336

>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus} Length = 323

 Score = 57.7 bits (140), Expect = 1e-10
 Identities = 21/80 (26%), Positives = 34/80 (42%), Gaps = 9/80 (11%)

Query: 40  NKIGEGGFGSVYKGRLEDG----TVVAVNVLSVE--SKQGETEFMSEVASMANINICHEN 93
             +G+G FGSV + +L+        VAV +L  +  +     EF+ E A M   +  H +
Sbjct: 29  RMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEFD--HPH 86

Query: 94  LVKLHGGCID-GPSRILAPL 112
           + KL G  +       L   
Sbjct: 87  VAKLVGVSLRSRAKGRLPIP 106

>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A Length = 450

 Score = 57.7 bits (140), Expect = 2e-10
 Identities = 31/137 (22%), Positives = 49/137 (35%), Gaps = 36/137 (26%)

Query: 40  NKIGEGGFGSVYKGRLEDGTVVAVNVLSVESKQGET--EFMSEVASMANINICHENLVKL 97
             IG+G FG V  G    G  VAV  +    K   T   F++E + M  +   H NLV+L
Sbjct: 199 QTIGKGEFGDVMLGDYR-GNKVAVKCI----KNDATAQAFLAEASVMTQLR--HSNLVQL 251

Query: 98  HGGCIDGPSRILAPLQASIEALFLFTKLWKMDKFISIYVVSGS------KKNRVKFNWIA 151
            G  ++               L++ T+   M K        GS       + R       
Sbjct: 252 LGVIVE-----------EKGGLYIVTEY--MAK--------GSLVDYLRSRGRSVLGGDC 290

Query: 152 RREIALGIARGLAYIHE 168
             + +L +   + Y+  
Sbjct: 291 LLKFSLDVCEAMEYLEG 307

>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens} Length = 367

 Score = 57.8 bits (140), Expect = 2e-10
 Identities = 21/72 (29%), Positives = 34/72 (47%), Gaps = 9/72 (12%)

Query: 40  NKIGEGGFGSVYKGRL------EDGTVVAVNVLSVE-SKQGETEFMSEVASMANINICHE 92
             +G G FG VY+G++           VAV  L    S+Q E +F+ E   ++  N  H+
Sbjct: 77  RGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFN--HQ 134

Query: 93  NLVKLHGGCIDG 104
           N+V+  G  +  
Sbjct: 135 NIVRCIGVSLQS 146

>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ... Length = 334

 Score = 57.3 bits (139), Expect = 2e-10
 Identities = 19/74 (25%), Positives = 34/74 (45%), Gaps = 10/74 (13%)

Query: 40  NKIGEGGFGSVYKGRL--------EDGTVVAVNVLSVESKQGE-TEFMSEVASMANINIC 90
             +GEG FG V             ++   VAV +L  ++ + + ++ +SE+  M  I   
Sbjct: 41  KPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIG-K 99

Query: 91  HENLVKLHGGCIDG 104
           H+N++ L G C   
Sbjct: 100 HKNIINLLGACTQD 113

>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ... Length = 322

 Score = 57.3 bits (139), Expect = 2e-10
 Identities = 21/72 (29%), Positives = 35/72 (48%), Gaps = 9/72 (12%)

Query: 40  NKIGEGGFGSVYKGRL------EDGTVVAVNVLSVESKQGE-TEFMSEVASMANINICHE 92
            ++G+G FG VY+G        E  T VA+  ++  +   E  EF++E + M   N    
Sbjct: 31  RELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFN--CH 88

Query: 93  NLVKLHGGCIDG 104
           ++V+L G    G
Sbjct: 89  HVVRLLGVVSQG 100

>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7 Length = 333

 Score = 57.0 bits (138), Expect = 2e-10
 Identities = 30/139 (21%), Positives = 54/139 (38%), Gaps = 35/139 (25%)

Query: 41  KIGEGGFGSVYKGRLEDGTV-----VAVNVLSVE-SKQGETEFMSEVASMANINICHENL 94
            IG G FG VYKG L+  +      VA+  L    +++   +F+ E   M   +  H N+
Sbjct: 51  VIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFS--HHNI 108

Query: 95  VKLHGGCIDGPSRILAPLQASIEALFLFTKLWKMDKFISIYVVSGS-----KKNRVKFNW 149
           ++L G           P+    E                 Y+ +G+     ++   +F+ 
Sbjct: 109 IRLEGVISKYK-----PMMIITE-----------------YMENGALDKFLREKDGEFSV 146

Query: 150 IARREIALGIARGLAYIHE 168
           +    +  GIA G+ Y+  
Sbjct: 147 LQLVGMLRGIAAGMKYLAN 165

>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A* Length = 314

 Score = 56.9 bits (138), Expect = 2e-10
 Identities = 21/72 (29%), Positives = 32/72 (44%), Gaps = 9/72 (12%)

Query: 40  NKIGEGGFGSVYKGRL------EDGTVVAVNVLSVESKQGE-TEFMSEVASMANINICHE 92
             +GEG FG V K            T VAV +L   +   E  + +SE   +  +N  H 
Sbjct: 29  KTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVN--HP 86

Query: 93  NLVKLHGGCIDG 104
           +++KL+G C   
Sbjct: 87  HVIKLYGACSQD 98

>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7 Length = 343

 Score = 56.9 bits (138), Expect = 2e-10
 Identities = 27/72 (37%), Positives = 36/72 (50%), Gaps = 9/72 (12%)

Query: 40  NKIGEGGFGSVYKGRLEDG------TVVAVNVLSVE-SKQGETEFMSEVASMANINICHE 92
             IGEG FG V++ R          T+VAV +L  E S   + +F  E A MA  +  + 
Sbjct: 53  RDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFD--NP 110

Query: 93  NLVKLHGGCIDG 104
           N+VKL G C  G
Sbjct: 111 NIVKLLGVCAVG 122

>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ... Length = 316

 Score = 56.9 bits (138), Expect = 2e-10
 Identities = 20/71 (28%), Positives = 28/71 (39%), Gaps = 8/71 (11%)

Query: 40  NKIGEGGFGSVYKGRL------EDGTVVAVNVLSVESKQGE-TEFMSEVASMANINICHE 92
             +G G FG V +              VAV +L   +   E    MSE+  + +I   H 
Sbjct: 33  KPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIG-HHL 91

Query: 93  NLVKLHGGCID 103
           N+V L G C  
Sbjct: 92  NVVNLLGACTK 102

>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A Length = 370

 Score = 57.0 bits (138), Expect = 3e-10
 Identities = 19/74 (25%), Positives = 34/74 (45%), Gaps = 10/74 (13%)

Query: 40  NKIGEGGFGSVYKGRL--------EDGTVVAVNVLSVESKQGE-TEFMSEVASMANINIC 90
             +GEG FG V             ++   VAV +L  ++ + + ++ +SE+  M  I   
Sbjct: 87  KPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIG-K 145

Query: 91  HENLVKLHGGCIDG 104
           H+N++ L G C   
Sbjct: 146 HKNIINLLGACTQD 159

>3zzw_A Tyrosine-protein kinase transmembrane receptor RO; transferase, neurotrophic tyrosine kinase, receptor-related NTRKR2; 2.90A {Homo sapiens} Length = 289

 Score = 56.4 bits (137), Expect = 3e-10
 Identities = 22/72 (30%), Positives = 28/72 (38%), Gaps = 9/72 (12%)

Query: 40  NKIGEGGFGSVYKGRL------EDGTVVAVNVLSVE-SKQGETEFMSEVASMANINICHE 92
            ++GE  FG VYKG L      E    VA+  L  +       EF  E    A +   H 
Sbjct: 15  EELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQ--HP 72

Query: 93  NLVKLHGGCIDG 104
           N+V L G     
Sbjct: 73  NVVCLLGVVTKD 84

>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A* Length = 313

 Score = 56.1 bits (136), Expect = 5e-10
 Identities = 22/74 (29%), Positives = 32/74 (43%), Gaps = 9/74 (12%)

Query: 40  NKIGEGGFGSVYKGRL------EDGTVVAVNVLSVESKQGE-TEFMSEVASMANINICHE 92
             +G G FG V +         +    VAV +L   +   E    MSE+  ++ +   H 
Sbjct: 29  KTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLG-NHM 87

Query: 93  NLVKLHGGC-IDGP 105
           N+V L G C I GP
Sbjct: 88  NIVNLLGACTIGGP 101

>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens} Length = 382

 Score = 55.8 bits (135), Expect = 5e-10
 Identities = 20/74 (27%), Positives = 33/74 (44%), Gaps = 10/74 (13%)

Query: 40  NKIGEGGFGSVYKGRL--------EDGTVVAVNVLSVESKQGE-TEFMSEVASMANINIC 90
             +GEG FG V                T VAV +L  ++ + + ++ +SE+  M  I   
Sbjct: 75  KPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIG-K 133

Query: 91  HENLVKLHGGCIDG 104
           H+N++ L G C   
Sbjct: 134 HKNIINLLGACTQD 147

>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A* Length = 302

 Score = 55.4 bits (134), Expect = 7e-10
 Identities = 19/65 (29%), Positives = 36/65 (55%), Gaps = 3/65 (4%)

Query: 36 FRTSNKIGEGGFGSVYKGR-LEDGTVVAVNVLSVESKQGETEFMSEVASMANINICHENL 94
          +    ++G+G FG VYK +  E G + A  V+  +S++   +++ E+  +A  +  H  +
Sbjct: 21 WEIVGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCD--HPYI 78

Query: 95 VKLHG 99
          VKL G
Sbjct: 79 VKLLG 83

>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7 Length = 344

 Score = 55.0 bits (133), Expect = 1e-09
 Identities = 23/74 (31%), Positives = 31/74 (41%), Gaps = 9/74 (12%)

Query: 40  NKIGEGGFGSVYKGRL------EDGTVVAVNVLSVESKQGE-TEFMSEVASMANINICHE 92
             +G G FG V                VAV +L  ++   E    MSE+  M  +   HE
Sbjct: 51  KVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLG-SHE 109

Query: 93  NLVKLHGGC-IDGP 105
           N+V L G C + GP
Sbjct: 110 NIVNLLGACTLSGP 123

>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A* Length = 333

 Score = 55.0 bits (133), Expect = 1e-09
 Identities = 22/72 (30%), Positives = 32/72 (44%), Gaps = 8/72 (11%)

Query: 40  NKIGEGGFGSVYKGRL------EDGTVVAVNVLSVESKQGE-TEFMSEVASMANINICHE 92
             +G G FG V +         +    VAV +L   +   E    MSE+  M+++   HE
Sbjct: 52  KTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLG-QHE 110

Query: 93  NLVKLHGGCIDG 104
           N+V L G C  G
Sbjct: 111 NIVNLLGACTHG 122

>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens} Length = 326

 Score = 53.9 bits (130), Expect = 2e-09
 Identities = 37/145 (25%), Positives = 58/145 (40%), Gaps = 33/145 (22%)

Query: 36  FRTSNKIGEGGFGSVYKGR-LEDGTVVAVNVLSVESKQGETEFMSEVASMANINIC-HEN 93
           F     +G G +G VYKGR ++ G + A+ V+ V     E E   E+  +       H N
Sbjct: 26  FELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTG-DEEEEIKQEINMLK--KYSHHRN 82

Query: 94  LVKLHGGCIDGPSRILAPLQASIEALFLFTKLW-KMDKFISIYVVSGS--------KKNR 144
           +   +G  I      +              +LW  M+     +  +GS        K N 
Sbjct: 83  IATYYGAFIKKNPPGMD------------DQLWLVME-----FCGAGSVTDLIKNTKGNT 125

Query: 145 VKFNWIARREIALGIARGLAYIHEE 169
           +K  WIA   I   I RGL+++H+ 
Sbjct: 126 LKEEWIA--YICREILRGLSHLHQH 148

>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A* Length = 313

 Score = 53.1 bits (128), Expect = 5e-09
 Identities = 20/151 (13%), Positives = 55/151 (36%), Gaps = 23/151 (15%)

Query: 22  SKISYNELKIATNGFRTSNKIGEGGFGSVYKGRLEDGTVVAVNVLSVESKQGET--EFMS 79
             + +  + +    +    +IG GG   V++   E   + A+  +++E    +T   + +
Sbjct: 16  ENLYFQSMSVKGRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRN 75

Query: 80  EVASMANINICHENLVKLHGGCIDGPSRILAPLQ-ASIEALFLFTKLWKMDKFISIYVVS 138
           E+A +  +    + +++L+         I   ++  +I+   L + L             
Sbjct: 76  EIAYLNKLQQHSDKIIRLY-DYEITDQYIYMVMECGNID---LNSWL------------- 118

Query: 139 GSKKNRVKFNWIARREIALGIARGLAYIHEE 169
              K +   +   R+     +   +  IH+ 
Sbjct: 119 ---KKKKSIDPWERKSYWKNMLEAVHTIHQH 146

>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens} Length = 343

 Score = 53.2 bits (128), Expect = 6e-09
 Identities = 12/75 (16%), Positives = 34/75 (45%), Gaps = 2/75 (2%)

Query: 27 NELKIATNGFRTSNKIGEGGFGSVYKGRLEDGTVVAVNVLSVESKQGET--EFMSEVASM 84
            + +    +    +IG GG   V++   E   + A+  +++E    +T   + +E+A +
Sbjct: 2  ECISVKGRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYL 61

Query: 85 ANINICHENLVKLHG 99
            +    + +++L+ 
Sbjct: 62 NKLQQHSDKIIRLYD 76

>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens} Length = 337

 Score = 52.8 bits (127), Expect = 6e-09
 Identities = 23/128 (17%), Positives = 46/128 (35%), Gaps = 10/128 (7%)

Query: 41  KIGEGGFGSVYKGR-LEDGTVVAVNVLSVESKQGETEFMSEVASMANINICHENLVKLHG 99
            + EGGF  VY+ + +  G   A+  L    ++     + EV  M  ++  H N+V+   
Sbjct: 35  VLAEGGFAFVYEAQDVGSGREYALKRLLSNEEEKNRAIIQEVCFMKKLSG-HPNIVQFCS 93

Query: 100 GCIDGPSRILAPLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGI 159
               G                L T+L K       ++     +  +  + +   +I    
Sbjct: 94  AASIGKEES----DTGQAEFLLLTELCKGQLV--EFLKKMESRGPLSCDTV--LKIFYQT 145

Query: 160 ARGLAYIH 167
            R + ++H
Sbjct: 146 CRAVQHMH 153

>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens} Length = 317

 Score = 52.7 bits (127), Expect = 7e-09
 Identities = 36/150 (24%), Positives = 54/150 (36%), Gaps = 29/150 (19%)

Query: 28  ELKIATNGFRTSNKIGEGGFGSVYKGR-LEDGTVVAVNVLSVESKQGETEFMSEVASMAN 86
            + I    +    K+GEGGF  V     L DG   A+  +    +Q   E   E      
Sbjct: 23  MVIIDNKHYLFIQKLGEGGFSYVDLVEGLHDGHFYALKRILCHEQQDREEAQREADMHRL 82

Query: 87  INICHENLVKLHGGCIDGPSRILAPLQASIEALFLFTKLWKMDKFISIYVVSGS-----K 141
            N  H N+++L   C+           A  EA  L             +   G+     +
Sbjct: 83  FN--HPNILRLVAYCLRERG-------AKHEAWLLLP-----------FFKRGTLWNEIE 122

Query: 142 KNRVKFNWIARREIA---LGIARGLAYIHE 168
           + + K N++   +I    LGI RGL  IH 
Sbjct: 123 RLKDKGNFLTEDQILWLLLGICRGLEAIHA 152

>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens} Length = 295

 Score = 52.3 bits (126), Expect = 9e-09
 Identities = 28/136 (20%), Positives = 50/136 (36%), Gaps = 32/136 (23%)

Query: 42  IGEGGFGSVYKGR-LEDGTVVAVNVLSVESKQGETEFMSEVASMANINICHENLVKLHGG 100
           +G+G +G VY GR L +   +A+  +     +       E+A   ++   H+N+V+  G 
Sbjct: 30  LGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLK--HKNIVQYLGS 87

Query: 101 CIDGPSRILAPLQASIEALFLFTKLWKMDKFISIYVVSGSKKN--RVKFNWIARRE---- 154
             +               + +F     M+      V  GS     R K+  +   E    
Sbjct: 88  FSEN------------GFIKIF-----ME-----QVPGGSLSALLRSKWGPLKDNEQTIG 125

Query: 155 -IALGIARGLAYIHEE 169
                I  GL Y+H+ 
Sbjct: 126 FYTKQILEGLKYLHDN 141

>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A Length = 303

 Score = 52.3 bits (126), Expect = 1e-08
 Identities = 25/140 (17%), Positives = 53/140 (37%), Gaps = 18/140 (12%)

Query: 36  FRTSNKIGEGGFGSVYKGR-LEDGTVVAVNVLSVESKQGETEFMSEVASMANINICHENL 94
           F     +G+G FG V K R   D    A+  +    ++  +  +SEV  +A++N  H+ +
Sbjct: 8   FEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTEEK-LSTILSEVMLLASLN--HQYV 64

Query: 95  VKLHGGCIDGPSRILAPLQASIEALFLFTKLWKMDKFISIYVVSGS-----KKNRVKFNW 149
           V+ +   ++  + +        +     + L+        Y  +G+         +    
Sbjct: 65  VRYYAAWLERRNFVKPMTAVKKK-----STLF----IQMEYCENGTLYDLIHSENLNQQR 115

Query: 150 IARREIALGIARGLAYIHEE 169
                +   I   L+YIH +
Sbjct: 116 DEYWRLFRQILEALSYIHSQ 135

>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A* Length = 303

 Score = 51.6 bits (124), Expect = 2e-08
 Identities = 13/66 (19%), Positives = 26/66 (39%), Gaps = 4/66 (6%)

Query: 36 FRTSNKIGEGGFGSVYKGR-LEDGTVVAVNVLSVESKQGETE-FMSEVASMANINICHEN 93
          +     IG G    V           VA+  +++E  Q   +  + E+ +M+  +  H N
Sbjct: 17 YELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCH--HPN 74

Query: 94 LVKLHG 99
          +V  + 
Sbjct: 75 IVSYYT 80

>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A* Length = 348

 Score = 51.3 bits (123), Expect = 2e-08
 Identities = 31/147 (21%), Positives = 53/147 (36%), Gaps = 38/147 (25%)

Query: 36  FRTSNKIGEGGFGSVYKGR-LEDGTVVAVNVLSVESKQGETEF---MSEVASMANINICH 91
           F    +IG G FG+VY  R + +  VVA+  +S   KQ   ++   + EV  +  +   H
Sbjct: 56  FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLR--H 113

Query: 92  ENLVKLHGGCIDGPSRILAPLQASIEALFLFTKLWKMDKFISIYVVSGS-----KKNRVK 146
            N ++  G  +                       W     + +    GS     + ++  
Sbjct: 114 PNTIQYRGCYLRE------------------HTAW-----LVMEYCLGSASDLLEVHKKP 150

Query: 147 FN--WIARREIALGIARGLAYIHEEIK 171
                IA   +  G  +GLAY+H    
Sbjct: 151 LQEVEIAA--VTHGALQGLAYLHSHNM 175

>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A* Length = 390

 Score = 51.4 bits (123), Expect = 3e-08
 Identities = 13/80 (16%), Positives = 36/80 (45%), Gaps = 2/80 (2%)

Query: 22  SKISYNELKIATNGFRTSNKIGEGGFGSVYKGRLEDGTVVAVNVLSVESKQGET--EFMS 79
           S  +   + +    +    +IG GG   V++   E   + A+  +++E    +T   + +
Sbjct: 44  SSSANECISVKGRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRN 103

Query: 80  EVASMANINICHENLVKLHG 99
           E+A +  +    + +++L+ 
Sbjct: 104 EIAYLNKLQQHSDKIIRLYD 123

>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens} Length = 311

 Score = 50.8 bits (122), Expect = 3e-08
 Identities = 18/67 (26%), Positives = 30/67 (44%), Gaps = 4/67 (5%)

Query: 36  FRTSNKIGEGGFGSVYKGR-LEDGTVVAVNV--LSVESKQGETEFMSEVASMANINICHE 92
           F+  +++G G +G V+K R  EDG + AV          +     ++EV S   +   H 
Sbjct: 59  FQRLSRLGHGSYGEVFKVRSKEDGRLYAVKRSMSPFRGPKDRARKLAEVGSHEKV-GQHP 117

Query: 93  NLVKLHG 99
             V+L  
Sbjct: 118 CCVRLEQ 124

>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} Length = 413

 Score = 50.4 bits (120), Expect = 5e-08
 Identities = 21/144 (14%), Positives = 46/144 (31%), Gaps = 17/144 (11%)

Query: 42  IGEGGFGSVYKGR-LEDGTVVAVNVLSVESKQGETE---FMSEVASMANI-NICHENLVK 96
           +G+    +  +    E G    V+V     +           EV  +  +  I ++   K
Sbjct: 86  LGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAK 145

Query: 97  LHGGCIDGPSRILAPLQASI-EALFLFTKLWKMDKFISIYVVSGSKKNRVK--------- 146
           +H   I     +  P +  +         +W + +F     +  + +   +         
Sbjct: 146 VHLRFIFPFDLVKDPQKKKMIRVRLDERDMWVLSRFFLYPRMQSNLQTFGEVLLSHSSTH 205

Query: 147 --FNWIARREIALGIARGLAYIHE 168
                 AR ++ L + R LA +H 
Sbjct: 206 KSLVHHARLQLTLQVIRLLASLHH 229

>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A* Length = 289

 Score = 49.6 bits (119), Expect = 7e-08
 Identities = 31/145 (21%), Positives = 51/145 (35%), Gaps = 34/145 (23%)

Query: 36  FRTSNKIGEGGFGSVYKGR-LEDGTVVAVNV--LSVESKQGETEFMSEVASMANINICHE 92
           F    KIG G FGSV+K     DG + A+      +     E   + EV + A +   H 
Sbjct: 13  FHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLG-QHS 71

Query: 93  NLVKLHGGCIDGPSRILAPLQASIEALFLFTKLWKMDKFISIYVVSGS-----KKNRVKF 147
           ++V+      +             + + +       +     Y   GS      +N    
Sbjct: 72  HVVRYFSAWAED------------DHMLIQ-----NE-----YCNGGSLADAISENYRIM 109

Query: 148 NWIARREIA---LGIARGLAYIHEE 169
           ++    E+    L + RGL YIH  
Sbjct: 110 SYFKEAELKDLLLQVGRGLRYIHSM 134

>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A* Length = 299

 Score = 49.7 bits (119), Expect = 8e-08
 Identities = 22/137 (16%), Positives = 49/137 (35%), Gaps = 21/137 (15%)

Query: 41  KIGEGGFGSVYKGR-LEDGTVVAVNVLSVESKQGETE-FMSEVASMANINICHENLVKLH 98
            +G GGFG V++ +   D    A+  + + +++   E  M EV ++A +   H  +V+  
Sbjct: 12  CLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLE--HPGIVRYF 69

Query: 99  GGCIDGPSRILAPLQASIEALFLFTKLWKMDKFISIYVVSGS-------KKNRVKFNWIA 151
              ++  +       +    L++      M           +       +    +     
Sbjct: 70  NAWLEKNTTEKLQPSSPKVYLYIQ-----MQ-----LCRKENLKDWMNGRCTIEERERSV 119

Query: 152 RREIALGIARGLAYIHE 168
              I L IA  + ++H 
Sbjct: 120 CLHIFLQIAEAVEFLHS 136

>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A* Length = 327

 Score = 49.6 bits (119), Expect = 9e-08
 Identities = 26/154 (16%), Positives = 50/154 (32%), Gaps = 33/154 (21%)

Query: 28  ELKIATNGFRTSNKIGEGGFGSVYKGR-LEDGTVVAVNVLSVESKQGE-TEFMSEVASMA 85
                    +   +IG G +GSV K      G ++AV  +     + E  + + ++  + 
Sbjct: 16  HWDFTAEDLKDLGEIGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEKEQKQLLMDL-DVV 74

Query: 86  NINICHENLVKLHGGCIDGPSRILAPLQASIEALFLFTKLW--------KMDKFISIYVV 137
             +     +V+ +G                  ALF     W          DKF     V
Sbjct: 75  MRSSDCPYIVQFYG------------------ALFREGDCWICMELMSTSFDKFYKY--V 114

Query: 138 SGSKKNRVKFNWIARREIALGIARGLAYIHEEIK 171
                + +    + +  I L   + L ++ E +K
Sbjct: 115 YSVLDDVIPEEILGK--ITLATVKALNHLKENLK 146

>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A* Length = 310

 Score = 49.6 bits (119), Expect = 9e-08
 Identities = 19/68 (27%), Positives = 32/68 (47%), Gaps = 6/68 (8%)

Query: 41  KIGEGGFGSVYKGR-LEDGTVVA---VNVLSVESKQGETEFMSEVASMANINICHENLVK 96
           KIG G F  VY+   L DG  VA   V +  +   +   + + E+  +  +N  H N++K
Sbjct: 39  KIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLN--HPNVIK 96

Query: 97  LHGGCIDG 104
            +   I+ 
Sbjct: 97  YYASFIED 104

>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A Length = 336

 Score = 49.1 bits (116), Expect = 1e-07
 Identities = 25/167 (14%), Positives = 50/167 (29%), Gaps = 27/167 (16%)

Query: 31  IATNGFRTSNKIGEGGFGSVYKGRLEDGTVVAVNVLSVESK--------QGETEFMSEVA 82
           + T   +   KIGEG FG V++    D T VA+ ++++E          +   E + E+ 
Sbjct: 17  LPTEKLQRCEKIGEGVFGEVFQTIA-DHTPVAIKIIAIEGPDLVNGSHQKTFEEILPEII 75

Query: 83  SM-------ANINICHENLVKLHGGCI---DGPSRILAPLQASIEALFLFTKLWKMDKFI 132
                      +    E  + L+         P  +L                    K  
Sbjct: 76  ISKELSLLSGEVCNRTEGFIGLNSVHCVQGSYPPLLLKAWDHYNSTKGSANDRPDFFKDD 135

Query: 133 SIYVV--------SGSKKNRVKFNWIARREIALGIARGLAYIHEEIK 171
            +++V           +      +    + I   +   LA     ++
Sbjct: 136 QLFIVLEFEFGGIDLEQMRTKLSSLATAKSILHQLTASLAVAEASLR 182

>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B* Length = 389

 Score = 49.1 bits (117), Expect = 1e-07
 Identities = 30/147 (20%), Positives = 49/147 (33%), Gaps = 39/147 (26%)

Query: 36  FRTSNKIGEG--GFGSVYKGR-LEDGTVVAVNVLSVESKQGE--TEFMSEVASMANINIC 90
           +     IG+G     +V   R    G  V V  +++E+   E  T    E+      N  
Sbjct: 27  YELLTVIGKGFEDLMTVNLARYKPTGEYVTVRRINLEACSNEMVTFLQGELHVSKLFN-- 84

Query: 91  HENLVKLHGGCIDGPSRILAPLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFN-- 148
           H N+V      I                     +LW     ++ ++  GS K+ +  +  
Sbjct: 85  HPNIVPYRATFIAD------------------NELW----VVTSFMAYGSAKDLICTHFM 122

Query: 149 ------WIARREIALGIARGLAYIHEE 169
                  IA   I  G+ + L YIH  
Sbjct: 123 DGMNELAIA--YILQGVLKALDYIHHM 147

>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens} Length = 314

 Score = 48.9 bits (117), Expect = 1e-07
 Identities = 38/145 (26%), Positives = 57/145 (39%), Gaps = 38/145 (26%)

Query: 36  FRTSNKIGEGGFGSVYKGR-LEDGTVVAVNVLSVESKQGETEFMSEVASMANINICHENL 94
           F    K+GEG +GSVYK    E G +VA+  + VES     E + E++ M   +    ++
Sbjct: 31  FDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVESD--LQEIIKEISIMQQCD--SPHV 86

Query: 95  VKLHGGCIDGPSRILAPLQASIEALFLFTKLW-KMDKFISIYVVSGS-------KKNRVK 146
           VK +G                       T LW  M+     Y  +GS       +   + 
Sbjct: 87  VKYYGSYFKN------------------TDLWIVME-----YCGAGSVSDIIRLRNKTLT 123

Query: 147 FNWIARREIALGIARGLAYIHEEIK 171
            + IA   I     +GL Y+H   K
Sbjct: 124 EDEIAT--ILQSTLKGLEYLHFMRK 146

>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A Length = 290

 Score = 48.4 bits (116), Expect = 2e-07
 Identities = 27/151 (17%), Positives = 55/151 (36%), Gaps = 30/151 (19%)

Query: 29  LKIATNGFRTSNKIGEGGFGSVYKGR-LEDGTVVAVNVLSVESKQGE-TEFMSEVA-SMA 85
           +++  +      ++G G +G V K R +  G ++AV  +       E    + ++  SM 
Sbjct: 2   MEVKADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMR 61

Query: 86  NINICHENLVKLHGGCIDGPSRILAPLQASIEALFLFTKLW----KMDK-FISIYVVSGS 140
            ++      V  +G                  ALF    +W     MD      Y     
Sbjct: 62  TVD--CPFTVTFYG------------------ALFREGDVWICMELMDTSLDKFYKQVID 101

Query: 141 KKNRVKFNWIARREIALGIARGLAYIHEEIK 171
           K   +  + + +  IA+ I + L ++H ++ 
Sbjct: 102 KGQTIPEDILGK--IAVSIVKALEHLHSKLS 130

>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A Length = 377

 Score = 48.1 bits (114), Expect = 3e-07
 Identities = 21/143 (14%), Positives = 44/143 (30%), Gaps = 17/143 (11%)

Query: 42  IGEGGFGSVYKGR-LEDGTVVAVNVLSVESKQGETE---FMSEVASMANI-NICHENLVK 96
           +G+    +  +    E G    V+V     +           EV  +  +  I ++   K
Sbjct: 81  LGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAK 140

Query: 97  LHGGCIDGPSRILAPLQASI-EALFLFTKLWKMDKFISIYVVSGS-----------KKNR 144
           +H   I     +  P +  +         +W + +F     +  +               
Sbjct: 141 VHLRFIFPFDLVKDPQKKKMIRVRLDERDMWVLSRFFLYPRMQSNLQTFGEVLLSHSSTH 200

Query: 145 VKFNWIARREIALGIARGLAYIH 167
                 AR ++ L + R LA +H
Sbjct: 201 KSLVHHARLQLTLQVIRLLASLH 223

>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A* Length = 336

 Score = 48.2 bits (115), Expect = 3e-07
 Identities = 17/80 (21%), Positives = 36/80 (45%), Gaps = 8/80 (10%)

Query: 28  ELKIATNGFRTSNKIGEGGFGSVYKGR-LEDGTVVAVNVLSVESKQGETEFMSEVASMAN 86
           E +   +      ++G G FG V++ +  + G   AV  + +E  +     + E+ + A 
Sbjct: 52  EYREEVHWMTHQPRVGRGSFGEVHRMKDKQTGFQCAVKKVRLEVFR-----VEELVACAG 106

Query: 87  INICHENLVKLHGGCIDGPS 106
           ++     +V L+G   +GP 
Sbjct: 107 LS--SPRIVPLYGAVREGPW 124

>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A* Length = 371

 Score = 47.4 bits (112), Expect = 6e-07
 Identities = 15/151 (9%), Positives = 39/151 (25%), Gaps = 20/151 (13%)

Query: 36  FRTSNKIGEGGFGSVYKGR-LEDGTVVAVNVLSVESKQGETE---FMSEVASMANINICH 91
            +    +  G    V+  R +E     A+ V ++ ++   +E         + A +    
Sbjct: 64  LKLVEPLRVGDRSVVFLVRDVERLEDFALKVFTMGAENSRSELERLHEATFAAARLL--G 121

Query: 92  ENLVKLHG----------GCIDGPSRILAPLQA----SIEALFLFTKLWKMDKFISIYVV 137
           E+  +               +                ++    L      +D  +    +
Sbjct: 122 ESPEEARDRRRLLLPSDAVAVQSQPPFAQLSPGQDDYAVANYLLLMPAASVDLELLFSTL 181

Query: 138 SGSKKNRVKFNWIARREIALGIARGLAYIHE 168
                 R     +A   +   + R  A +  
Sbjct: 182 DFVYVFRGDEGILALHILTAQLIRLAANLQS 212

>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B* Length = 284

 Score = 46.5 bits (111), Expect = 9e-07
 Identities = 30/143 (20%), Positives = 54/143 (37%), Gaps = 25/143 (17%)

Query: 36  FRTSNKIGEGGFGSVYKGR-LEDGTVVAVNVLSVESKQGETEFMSEVASMANINICHENL 94
           F+    IG GGFG V+K +   DG    +  +   ++    +   EV ++A ++  H N+
Sbjct: 13  FKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNNE----KAEREVKALAKLD--HVNI 66

Query: 95  VKLHGGCIDGPSRILAPLQASIEALFLFTKLWKMDKFISI---YVVSGS------KKNRV 145
           V  +G             + S              K + I   +   G+      K+   
Sbjct: 67  VHYNGCWDGFDYDPETSSKNSSR---------SKTKCLFIQMEFCDKGTLEQWIEKRRGE 117

Query: 146 KFNWIARREIALGIARGLAYIHE 168
           K + +   E+   I +G+ YIH 
Sbjct: 118 KLDKVLALELFEQITKGVDYIHS 140

>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vid_A* 3hng_A* Length = 359

 Score = 46.5 bits (110), Expect = 1e-06
 Identities = 20/77 (25%), Positives = 30/77 (38%), Gaps = 8/77 (10%)

Query: 40  NKIGEGGFGSVYKGRL------EDGTVVAVNVLSVESKQGET-EFMSEVASMANINICHE 92
             +G G FG V +              VAV +L   +   E    MSE+  + +I   H 
Sbjct: 28  KPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIG-HHL 86

Query: 93  NLVKLHGGCIDGPSRIL 109
           N+V L G C      ++
Sbjct: 87  NVVNLLGACTKPGGPLM 103

>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens} Length = 319

 Score = 46.3 bits (110), Expect = 1e-06
 Identities = 18/71 (25%), Positives = 36/71 (50%), Gaps = 4/71 (5%)

Query: 30 KIATNGFRTSNKIGEGGFGSVYKGR-LEDGTVVAVNVLSVESKQGETE-FMSEVASMANI 87
            + + +  S+ +G+G   +V++GR  + G + A+ V +  S     +  M E   +  +
Sbjct: 5  STSNHLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKL 64

Query: 88 NICHENLVKLH 98
          N  H+N+VKL 
Sbjct: 65 N--HKNIVKLF 73

>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens} Length = 308

 Score = 45.3 bits (108), Expect = 3e-06
 Identities = 20/66 (30%), Positives = 30/66 (45%), Gaps = 7/66 (10%)

Query: 40 NKIGEGGFGSVYKGR-LEDGTVVAVNVLSVES-KQGETEFMS----EVASMANINIC-HE 92
           +IG G +G+VYK R    G  VA+  + V +   G          EVA +  +    H 
Sbjct: 15 AEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRLEAFEHP 74

Query: 93 NLVKLH 98
          N+V+L 
Sbjct: 75 NVVRLM 80

>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens} Length = 396

 Score = 45.2 bits (107), Expect = 3e-06
 Identities = 18/71 (25%), Positives = 36/71 (50%), Gaps = 4/71 (5%)

Query: 30 KIATNGFRTSNKIGEGGFGSVYKGR-LEDGTVVAVNVLSVESKQGETE-FMSEVASMANI 87
            + + +  S+ +G+G   +V++GR  + G + A+ V +  S     +  M E   +  +
Sbjct: 5  STSNHLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKL 64

Query: 88 NICHENLVKLH 98
          N  H+N+VKL 
Sbjct: 65 N--HKNIVKLF 73

>4apc_A Serine/threonine-protein kinase NEK1; transferase; 2.10A {Homo sapiens} Length = 350

 Score = 44.7 bits (106), Expect = 4e-06
 Identities = 20/67 (29%), Positives = 31/67 (46%), Gaps = 5/67 (7%)

Query: 41  KIGEGGFGSVYKGR-LEDGTVVAVNVLSVE--SKQGETEFMSEVASMANINICHENLVKL 97
           KIGEG FG     +  EDG    +  +++   S +   E   EVA +AN+   H N+V+ 
Sbjct: 31  KIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMK--HPNIVQY 88

Query: 98  HGGCIDG 104
                + 
Sbjct: 89  RESFEEN 95

>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A* Length = 335

 Score = 44.2 bits (105), Expect = 5e-06
 Identities = 11/71 (15%), Positives = 29/71 (40%), Gaps = 7/71 (9%)

Query: 42  IGEGGFGSVYKGR-LEDGTVVAVNVLS---VESKQGETEFMSEVASMANINICHENLVKL 97
           +G+GGF   ++    +   V A  ++    +       +   E++   ++   H+++V  
Sbjct: 49  LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLA--HQHVVGF 106

Query: 98  HGGCIDGPSRI 108
           H G  +    +
Sbjct: 107 H-GFFEDNDFV 116

>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A* Length = 294

 Score = 43.7 bits (104), Expect = 7e-06
 Identities = 11/71 (15%), Positives = 29/71 (40%), Gaps = 7/71 (9%)

Query: 42  IGEGGFGSVYKGR-LEDGTVVAVNVL---SVESKQGETEFMSEVASMANINICHENLVKL 97
           +G+GGF   ++    +   V A  ++    +       +   E++   ++   H+++V  
Sbjct: 23  LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLA--HQHVVGF 80

Query: 98  HGGCIDGPSRI 108
           H G  +    +
Sbjct: 81  H-GFFEDNDFV 90

>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A* Length = 317

 Score = 43.7 bits (104), Expect = 9e-06
 Identities = 20/64 (31%), Positives = 35/64 (54%), Gaps = 10/64 (15%)

Query: 40 NKIGEGGFGSVYKGR-LEDGTVVAVNVLSVESKQGETEFMS----EVASMANINICHENL 94
           K+G G + +VYKG     G  VA+  + ++S++G     S    E++ M  +   HEN+
Sbjct: 11 EKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEG---TPSTAIREISLMKELK--HENI 65

Query: 95 VKLH 98
          V+L+
Sbjct: 66 VRLY 69

>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7 Length = 346

 Score = 43.0 bits (102), Expect = 1e-05
 Identities = 14/65 (21%), Positives = 30/65 (46%), Gaps = 8/65 (12%)

Query: 40 NKIGEGGFGSVYKGR-LEDGTVVAVNVLSVESKQGETE---FMS--EVASMANINICHEN 93
          + +GEG F +VYK R      +VA+  + +  +    +     +  E+  +  ++  H N
Sbjct: 16 DFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELS--HPN 73

Query: 94 LVKLH 98
          ++ L 
Sbjct: 74 IIGLL 78

>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus} Length = 332

 Score = 42.9 bits (101), Expect = 1e-05
 Identities = 16/67 (23%), Positives = 33/67 (49%), Gaps = 4/67 (5%)

Query: 41  KIGEGGFGSVYKGR-LEDGTVVAVNVLSVESKQGETE-FMSEVASMANINICHENLVKLH 98
            +G GGFG V++ +   D    A+  + + +++   E  M EV ++A +   H  +V+  
Sbjct: 13  CMGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLE--HPGIVRYF 70

Query: 99  GGCIDGP 105
              ++ P
Sbjct: 71  NAWLETP 77

>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens} Length = 318

 Score = 42.7 bits (101), Expect = 2e-05
 Identities = 21/155 (13%), Positives = 48/155 (30%), Gaps = 29/155 (18%)

Query: 23  KISYNELKIATNGFRTSNKIGEGGFGSVYKGR-LEDGTVVAVNVLSVESKQGE-TEFMSE 80
            I     +   N      ++G G  G V+K R  + G V+AV  +     + E    + +
Sbjct: 14  TIGGQRYQAEINDLENLGEMGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKEENKRILMD 73

Query: 81  VASMANINICHENLVKLHGGCIDGPSRILAPLQASIEALFLFTKLW----KMDKFISIYV 136
           +  +   +     +V+  G                       T ++     M        
Sbjct: 74  LDVVLK-SHDCPYIVQCFG------------------TFITNTDVFIAMELMG--TCAEK 112

Query: 137 VSGSKKNRVKFNWIARREIALGIARGLAYIHEEIK 171
           +    +  +    + +  + + I + L Y+ E+  
Sbjct: 113 LKKRMQGPIPERILGK--MTVAIVKALYYLKEKHG 145

>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens} Length = 373

 Score = 42.4 bits (100), Expect = 2e-05
 Identities = 15/60 (25%), Positives = 30/60 (50%), Gaps = 3/60 (5%)

Query: 41  KIGEGGFGSVYKGR-LEDGTVVAVNVLSVESKQGETEFMSEVASMANINICHENLVKLHG 99
            +G G FG V+K      G  +A  ++     + + E  +E++ M  ++  H NL++L+ 
Sbjct: 96  ILGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKEEVKNEISVMNQLD--HANLIQLYD 153

>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens} Length = 432

 Score = 42.5 bits (100), Expect = 2e-05
 Identities = 18/138 (13%), Positives = 43/138 (31%), Gaps = 32/138 (23%)

Query: 36  FRTSNKIGEGGFGSVYKGRLEDGTVVAVNVLSVESKQGETEFMSEVASMANINICHENLV 95
           F   + +G G  G++    + D   VAV  +     +  +    EV  +   +  H N++
Sbjct: 26  FCPKDVLGHGAEGTIVYRGMFDNRDVAVKRI---LPECFSFADREVQLLRESDE-HPNVI 81

Query: 96  KLHGGCIDGPSRILAPLQASIEALFLFTKLWKMDKFISIYVVSGS-----KKNRVKFNWI 150
           +      D             +  ++  +L            + +     ++       +
Sbjct: 82  RYFCTEKDR------------QFQYIAIEL-----------CAATLQEYVEQKDFAHLGL 118

Query: 151 ARREIALGIARGLAYIHE 168
               +      GLA++H 
Sbjct: 119 EPITLLQQTTSGLAHLHS 136

>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens} Length = 278

 Score = 42.1 bits (100), Expect = 2e-05
 Identities = 12/71 (16%), Positives = 30/71 (42%), Gaps = 7/71 (9%)

Query: 42  IGEGGFGSVYKGR-LEDGTVVAVNVLS---VESKQGETEFMSEVASMANINICHENLVKL 97
           +G+G F  VY+   +  G  VA+ ++    +          +EV     +   H ++++L
Sbjct: 19  LGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLK--HPSILEL 76

Query: 98  HGGCIDGPSRI 108
           +    +  + +
Sbjct: 77  Y-NYFEDSNYV 86

>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A* Length = 279

 Score = 42.3 bits (100), Expect = 2e-05
 Identities = 18/72 (25%), Positives = 31/72 (43%), Gaps = 5/72 (6%)

Query: 41  KIGEGGFGSVYKGR-LEDGTVVAVNVLSVE--SKQGETEFMSEVASMANINICHENLVKL 97
            IG G +G   K R   DG ++    L     ++  +   +SEV  +  +   H N+V+ 
Sbjct: 13  TIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELK--HPNIVRY 70

Query: 98  HGGCIDGPSRIL 109
           +   ID  +  L
Sbjct: 71  YDRIIDRTNTTL 82

>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A* Length = 676

 Score = 42.7 bits (100), Expect = 2e-05
 Identities = 17/65 (26%), Positives = 27/65 (41%), Gaps = 4/65 (6%)

Query: 36 FRTSNKIGEGGFGSVYKGR-LEDGTVVAVNVLSVESKQGETE-FMSEVASMANINICHEN 93
          +    ++G GGFG V +    + G  VA+     E      E +  E+  M  +N  H N
Sbjct: 16 WEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLN--HPN 73

Query: 94 LVKLH 98
          +V   
Sbjct: 74 VVSAR 78

>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* Length = 360

 Score = 42.1 bits (99), Expect = 3e-05
 Identities = 30/168 (17%), Positives = 66/168 (39%), Gaps = 38/168 (22%)

Query: 13  SRKVQGYKFSKISYNELKIATNGFRTSNKIGEGGFGSVYKGRL-EDGTVVAVNVLSVESK 71
            ++++ +   K    ELK   + F   +++G G  G V+K      G V+A  ++ +E K
Sbjct: 14  RKRLEAFLTQKQKVGELKD--DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIK 71

Query: 72  QGE-TEFMSEVASMANINICHENLVKLHGGCIDGPSRILAPLQASIEALFLFTKLWKMDK 130
                + + E+  +   N     +V  +G                  A +   ++     
Sbjct: 72  PAIRNQIIRELQVLHECN--SPYIVGFYG------------------AFYSDGEIS---- 107

Query: 131 FISI-YVVSGS------KKNRVKFNWIARREIALGIARGLAYIHEEIK 171
            I + ++  GS      K  R+    + +  +++ + +GL Y+ E+ K
Sbjct: 108 -ICMEHMDGGSLDQVLKKAGRIPEQILGK--VSIAVIKGLTYLREKHK 152

>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7 Length = 387

 Score = 42.4 bits (100), Expect = 3e-05
 Identities = 13/60 (21%), Positives = 26/60 (43%), Gaps = 3/60 (5%)

Query: 41  KIGEGGFGSVYKGR-LEDGTVVAVNVLSVESKQGETEFMSEVASMANINICHENLVKLHG 99
           ++G G FG V++      G V     ++      +    +E++ M  ++  H  L+ LH 
Sbjct: 58  ELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLH--HPKLINLHD 115

>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens} Length = 312

 Score = 41.9 bits (99), Expect = 3e-05
 Identities = 18/66 (27%), Positives = 27/66 (40%), Gaps = 9/66 (13%)

Query: 42  IGEGGFGSVYKGR-LEDGTVVAV------NVLSVESKQGETEFMSEVASM--ANINICHE 92
           +G+GGFG+V+ G  L D   VA+       VL             EVA +        H 
Sbjct: 39  LGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGGHP 98

Query: 93  NLVKLH 98
            +++L 
Sbjct: 99  GVIRLL 104

>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} PDB: 2qkr_A* Length = 311

 Score = 41.8 bits (99), Expect = 3e-05
 Identities = 18/64 (28%), Positives = 34/64 (53%), Gaps = 10/64 (15%)

Query: 40 NKIGEGGFGSVYKGRLEDGTVVAVNVLSVESKQGETEFMS-----EVASMANINICHENL 94
           K+GEG +G VYK +   G +VA+  + +++   E E +      E++ +  ++  H N+
Sbjct: 27 EKVGEGTYGVVYKAKDSQGRIVALKRIRLDA---EDEGIPSTAIREISLLKELH--HPNI 81

Query: 95 VKLH 98
          V L 
Sbjct: 82 VSLI 85

>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis} Length = 681

 Score = 42.1 bits (99), Expect = 3e-05
 Identities = 13/62 (20%), Positives = 24/62 (38%), Gaps = 7/62 (11%)

Query: 41  KIGEGGFGSVYKG---RLEDGTVVAVNVLSVESKQGETE-FMSEVASMANINICHENLVK 96
            I  GG G +Y      + +G  V +  L            M+E   +A +   H ++V+
Sbjct: 87  CIAHGGLGWIYLALDRNV-NGRPVVLKGLVHSGDAEAQAMAMAERQFLAEVV--HPSIVQ 143

Query: 97  LH 98
           + 
Sbjct: 144 IF 145

>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} Length = 331

 Score = 41.4 bits (98), Expect = 4e-05
 Identities = 17/62 (27%), Positives = 28/62 (45%), Gaps = 5/62 (8%)

Query: 40 NKIGEGGFGSVYKGR-LEDGTVVAVNVLSVESKQGETEFMS--EVASMANINICHENLVK 96
            +GEG +G V K R  + G +VA+            + ++  E+  +  +   HENLV 
Sbjct: 31 GLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLR--HENLVN 88

Query: 97 LH 98
          L 
Sbjct: 89 LL 90

>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A Length = 573

 Score = 41.7 bits (98), Expect = 5e-05
 Identities = 15/70 (21%), Positives = 28/70 (40%), Gaps = 3/70 (4%)

Query: 41  KIGEGGFGSVYKGR-LEDGTVVAVNVLSVESKQGETEFMSEVASMANINICHENLVKLHG 99
           ++G G FG V++      G   A   +    +  +     E+ +M+ +   H  LV LH 
Sbjct: 164 ELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLR--HPTLVNLHD 221

Query: 100 GCIDGPSRIL 109
              D    ++
Sbjct: 222 AFEDDNEMVM 231

>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens} Length = 311

 Score = 41.0 bits (97), Expect = 6e-05
 Identities = 18/62 (29%), Positives = 29/62 (46%), Gaps = 5/62 (8%)

Query: 40 NKIGEGGFGSVYKGR-LEDGTVVAVNVLSVESKQGETEFMS--EVASMANINICHENLVK 96
           KIGEG +G V+K R  + G +VA+            + ++  E+  +  +   H NLV 
Sbjct: 9  GKIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLK--HPNLVN 66

Query: 97 LH 98
          L 
Sbjct: 67 LL 68

>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A Length = 288

 Score = 41.0 bits (97), Expect = 6e-05
 Identities = 20/64 (31%), Positives = 32/64 (50%), Gaps = 10/64 (15%)

Query: 40 NKIGEGGFGSVYKGRLEDGTVVAVNVLSVESKQGETEFMS-----EVASMANINICHENL 94
           KIGEG +G VYK +   G   A+  + +E    E E +      E++ +  +   H N+
Sbjct: 8  EKIGEGTYGVVYKAQNNYGETFALKKIRLEK---EDEGIPSTTIREISILKELK--HSNI 62

Query: 95 VKLH 98
          VKL+
Sbjct: 63 VKLY 66

>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A Length = 292

 Score = 41.0 bits (97), Expect = 7e-05
 Identities = 18/65 (27%), Positives = 35/65 (53%), Gaps = 11/65 (16%)

Query: 40 NKIGEGGFGSVYKGR-LEDGTVVAVNVLSVESKQGETEFMS-----EVASMANINICHEN 93
           KIGEG +G+V+K +  E   +VA+  + ++    + E +      E+  +  +   H+N
Sbjct: 8  EKIGEGTYGTVFKAKNRETHEIVALKRVRLDD---DDEGVPSSALREICLLKELK--HKN 62

Query: 94 LVKLH 98
          +V+LH
Sbjct: 63 IVRLH 67

>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens} Length = 345

 Score = 40.9 bits (96), Expect = 8e-05
 Identities = 27/110 (24%), Positives = 39/110 (35%), Gaps = 11/110 (10%)

Query: 1   MHGHSQYSIINYSRKVQGYKFSKISYNELKIAT----NGFRTSNKIGEGGFGSVYKG-RL 55
           MH H  +S          Y    + + E K+      N +    KIG GGFG +Y     
Sbjct: 1   MHHHHHHSSGVDLGTENLYF-QSMPFPEGKVLDDMEGNQWVLGKKIGSGGFGLIYLAFPT 59

Query: 56  EDGTVVAVNVLSVESKQG-----ETEFMSEVASMANINICHENLVKLHGG 100
                 A +V+ VE ++      E +F   VA    I    E     + G
Sbjct: 60  NKPEKDARHVVKVEYQENGPLFSELKFYQRVAKKDCIKKWIERKQLDYLG 109

>2r3i_A Cell division protein kinase 2; serine/threonine-protein kinase, cell cycle, inhibition, cyclin-dependent kinase, cancer, ATP-binding; HET: SCF; 1.28A {Homo sapiens} PDB: 2r3j_A* 2r3k_A* 2r3l_A* 2r3m_A* 2r3n_A* 2r3o_A* 2r3p_A* 2r3q_A* 1jvp_P* 1buh_A 1ckp_A* 1di8_A* 1dm2_A* 1f5q_A 1fin_A* 1fq1_B* 1fvt_A* 1fvv_A* 1g5s_A* 1gih_A* ... Length = 299

 Score = 40.6 bits (96), Expect = 8e-05
 Identities = 24/65 (36%), Positives = 36/65 (55%), Gaps = 11/65 (16%)

Query: 40 NKIGEGGFGSVYKGR-LEDGTVVAVNVLSVESKQGETEFMS-----EVASMANINICHEN 93
           KIGEG +G VYK R    G VVA+  + +++   ETE +      E++ +  +N  H N
Sbjct: 9  EKIGEGTYGVVYKARNKLTGEVVALKKIRLDT---ETEGVPSTAIREISLLKELN--HPN 63

Query: 94 LVKLH 98
          +VKL 
Sbjct: 64 IVKLL 68

>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A* Length = 329

 Score = 40.7 bits (96), Expect = 8e-05
 Identities = 18/65 (27%), Positives = 30/65 (46%), Gaps = 11/65 (16%)

Query: 40 NKIGEGGFGSVYKGR-LEDGTVVAVNVLSVESKQGETEFMS-----EVASMANINICHEN 93
           K+GEG +G VYK         VA+  + +E    E E +      EV+ +  +   H N
Sbjct: 40 TKLGEGTYGEVYKAIDTVTNETVAIKRIRLEH---EEEGVPGTAIREVSLLKELQ--HRN 94

Query: 94 LVKLH 98
          +++L 
Sbjct: 95 IIELK 99

>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A* Length = 484

 Score = 40.8 bits (96), Expect = 8e-05
 Identities = 18/68 (26%), Positives = 33/68 (48%), Gaps = 6/68 (8%)

Query: 36 FRTSNKIGEGGFGSVYKGR-LEDGTVVAVNVLS---VESKQGETEFMSEVASMANINICH 91
          ++    +G+G FG V   +    G   AV V+S   V+ K  +   + EV  +  ++  H
Sbjct: 28 YKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLD--H 85

Query: 92 ENLVKLHG 99
           N++KL+ 
Sbjct: 86 PNIMKLYE 93

>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens} Length = 324

 Score = 40.7 bits (96), Expect = 1e-04
 Identities = 19/68 (27%), Positives = 37/68 (54%), Gaps = 10/68 (14%)

Query: 36 FRTSNKIGEGGFGSVYKGR-LEDGTVVAVNVLSVESKQGETEF----MSEVASMANINIC 90
          +   +K+GEG + +VYKG+      +VA+  + +E ++G        + EV+ + ++   
Sbjct: 4  YIKLDKLGEGTYATVYKGKSKLTDNLVALKEIRLEHEEG---APCTAIREVSLLKDLK-- 58

Query: 91 HENLVKLH 98
          H N+V LH
Sbjct: 59 HANIVTLH 66

>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 3lau_A* 2wtv_A* ... Length = 279

 Score = 40.3 bits (95), Expect = 1e-04
 Identities = 19/68 (27%), Positives = 35/68 (51%), Gaps = 6/68 (8%)

Query: 36 FRTSNKIGEGGFGSVYKGR-LEDGTVVAVNVLS---VESKQGETEFMSEVASMANINICH 91
          F     +G+G FG+VY  R  +   ++A+ VL    +E    E +   EV   +++   H
Sbjct: 11 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR--H 68

Query: 92 ENLVKLHG 99
           N+++L+G
Sbjct: 69 PNILRLYG 76

>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens} Length = 365

 Score = 40.3 bits (94), Expect = 1e-04
 Identities = 14/76 (18%), Positives = 24/76 (31%), Gaps = 4/76 (5%)

Query: 28  ELKIATNGFRTSNKIGEGGFGSVYKGRLEDGTVVAVNV---LSVESKQGETEFMSEVASM 84
           E ++ +      + +GEG F  VY+    D           L V+      EF      M
Sbjct: 59  EFQLGSKLVYVHHLLGEGAFAQVYEATQGDLNDAKNKQKFVLKVQKPANPWEFYIGTQLM 118

Query: 85  ANIN-ICHENLVKLHG 99
             +        +K + 
Sbjct: 119 ERLKPSMQHMFMKFYS 134

>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A Length = 304

 Score = 39.9 bits (94), Expect = 1e-04
 Identities = 15/65 (23%), Positives = 27/65 (41%), Gaps = 3/65 (4%)

Query: 36 FRTSNKIGEGGFGSVYKGR-LEDGTVVAVNVLSVESKQGETEFMSEVASMANINICHENL 94
          F     +G G F  V+  +    G + A+  +       ++   +E+A +  I   HEN+
Sbjct: 11 FIFMEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFRDSSLENEIAVLKKIK--HENI 68

Query: 95 VKLHG 99
          V L  
Sbjct: 69 VTLED 73

>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A Length = 286

 Score = 39.7 bits (93), Expect = 2e-04
 Identities = 8/69 (11%), Positives = 22/69 (31%), Gaps = 10/69 (14%)

Query: 36 FRTSNKIGEGGFGSVYKGRLED---GTVVAVNVLSVESKQGET---EFMSEVASMANINI 89
          +R     G       ++    D      VA+  +  +    +    E +S    ++ I+ 
Sbjct: 33 YRLLIFHGGVPPLQFWQAL--DTALDRQVALTFVDPQGVLPDDVLQETLSRTLRLSRID- 89

Query: 90 CHENLVKLH 98
              + ++ 
Sbjct: 90 -KPGVARVL 97

>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* Length = 351

 Score = 39.5 bits (93), Expect = 2e-04
 Identities = 21/66 (31%), Positives = 33/66 (50%), Gaps = 11/66 (16%)

Query: 40 NKIGEGGFGSVYKGR-LEDGTVVAVNVLSVESKQGETE---FMS--EVASMANINICHEN 93
           KIG+G FG V+K R  + G  VA+  + +E+   E E     +  E+  +  +   HEN
Sbjct: 23 AKIGQGTFGEVFKARHRKTGQKVALKKVLMEN---EKEGFPITALREIKILQLLK--HEN 77

Query: 94 LVKLHG 99
          +V L  
Sbjct: 78 VVNLIE 83

>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens} Length = 405

 Score = 39.4 bits (92), Expect = 2e-04
 Identities = 17/65 (26%), Positives = 29/65 (44%), Gaps = 15/65 (23%)

Query: 41 KIGEGGFGSVYKGR---LEDGTVVAVNVLSVESKQGETEFMSEVASMANINIC----HEN 93
          K+G G +G VYK +    +D    A+       KQ E   +S +++   I +     H N
Sbjct: 28 KVGRGTYGHVYKAKRKDGKDDKDYAL-------KQIEGTGIS-MSACREIALLRELKHPN 79

Query: 94 LVKLH 98
          ++ L 
Sbjct: 80 VISLQ 84

>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group} Length = 483

 Score = 39.6 bits (92), Expect = 3e-04
 Identities = 16/46 (34%), Positives = 26/46 (56%), Gaps = 2/46 (4%)

Query: 28 ELKIATNGFRTSNKIGEGGFGSVYKGR-LEDGTVVAVNVLSVESKQ 72
          E ++  N FR   KIG G FG +Y G  ++    VA+ + +V++K 
Sbjct: 2  EPRVG-NKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTKH 46

>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B Length = 326

 Score = 39.1 bits (92), Expect = 3e-04
 Identities = 21/67 (31%), Positives = 33/67 (49%), Gaps = 11/67 (16%)

Query: 40 NKIGEGGFGSVYKGR--LEDGTVVAVNVLSVESKQGETEFMS-----EVASMANINIC-H 91
           +IGEG +G V+K R     G  VA+  + V++     E M      EVA + ++    H
Sbjct: 17 AEIGEGAYGKVFKARDLKNGGRFVALKRVRVQT---GEEGMPLSTIREVAVLRHLETFEH 73

Query: 92 ENLVKLH 98
           N+V+L 
Sbjct: 74 PNVVRLF 80

>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ... Length = 284

 Score = 38.7 bits (91), Expect = 3e-04
 Identities = 16/68 (23%), Positives = 36/68 (52%), Gaps = 6/68 (8%)

Query: 36 FRTSNKIGEGGFGSVYKGR-LEDGTVVAVNVLS---VESKQGETEFMSEVASMANINICH 91
          F     +G+G FG+VY  R  ++  ++A+ VL    +E +  E +   E+   +++   H
Sbjct: 16 FDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLR--H 73

Query: 92 ENLVKLHG 99
           N+++++ 
Sbjct: 74 PNILRMYN 81

>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ... Length = 320

 Score = 38.9 bits (91), Expect = 4e-04
 Identities = 16/64 (25%), Positives = 28/64 (43%), Gaps = 7/64 (10%)

Query: 42  IGEGGFGSVYKGR-LEDGTVVAVNVLSVESKQGETEFMS------EVASMANINICHENL 94
           +G GGFGSVY G  + D   VA+  +  +      E  +      EV  +  ++     +
Sbjct: 51  LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 110

Query: 95  VKLH 98
           ++L 
Sbjct: 111 IRLL 114

>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A* Length = 434

 Score = 38.6 bits (90), Expect = 5e-04
 Identities = 11/64 (17%), Positives = 22/64 (34%), Gaps = 4/64 (6%)

Query: 36 FRTSNKIGEGGFGSVYKGRLEDGTVVAVNVLSVESKQGETEFMSEVASMANINICHENLV 95
            +   +G G  G+V       G  VAV  +           + E+  +      H N++
Sbjct: 17 VVSEKILGYGSSGTVVFQGSFQGRPVAVKRM---LIDFCDIALMEIKLLTES-DDHPNVI 72

Query: 96 KLHG 99
          + + 
Sbjct: 73 RYYC 76

>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A* Length = 494

 Score = 38.5 bits (90), Expect = 5e-04
 Identities = 23/109 (21%), Positives = 45/109 (41%), Gaps = 8/109 (7%)

Query: 1   MHGHSQYSIINYSRKVQG-YKFSKISYNELKIA--TNGFRTSNKIGEGGFGSVYKGR-LE 56
           MH H  +S    +   QG  + +   +   K    +  ++   K+G G +G V   R   
Sbjct: 1   MHHHHHHSSGRENLYFQGDLQATPGMFITSKKGHLSEMYQRVKKLGSGAYGEVLLCRDKV 60

Query: 57  DGTVVAVNVLSVE--SKQGETEFMSEVASMANINICHENLVKLHGGCID 103
                A+ ++     S    ++ + EVA +  ++  H N++KL+    D
Sbjct: 61  THVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLD--HPNIMKLYDFFED 107

>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A* Length = 486

 Score = 38.5 bits (90), Expect = 5e-04
 Identities = 17/72 (23%), Positives = 31/72 (43%), Gaps = 7/72 (9%)

Query: 36  FRTSNKIGEGGFGSVYKGR-LEDGTVVAVNVLS---VESKQGETEFMSEVASMANINICH 91
           +     +G+G FG V K +        AV V++    ++K      + EV  +  ++  H
Sbjct: 24  YNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTS-TILREVELLKKLD--H 80

Query: 92  ENLVKLHGGCID 103
            N++KL     D
Sbjct: 81  PNIMKLFEILED 92

>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II} Length = 345

 Score = 38.7 bits (90), Expect = 5e-04
 Identities = 18/105 (17%), Positives = 38/105 (36%), Gaps = 16/105 (15%)

Query: 1  MHGHSQYSIINYSRKVQGYKFSKISYNELKIATNGFRTSNKIGEGGFGSVYKGR-LEDGT 59
          MH H  +S    +   QG    ++           +     IG+G +G V      +   
Sbjct: 1  MHHHHHHSSGRENLYFQGGSLLEL--------QKKYHLKGAIGQGSYGVVRVAIENQTRA 52

Query: 60 VVAVNV-----LSVESKQGETEFMSEVASMANINICHENLVKLHG 99
          + A+ +     +   + +      +EV  M  ++  H N+ +L+ 
Sbjct: 53 IRAIKIMNKNKIRQINPKDVERIKTEVRLMKKLH--HPNIARLYE 95

>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7 Length = 321

 Score = 38.4 bits (90), Expect = 6e-04
 Identities = 11/60 (18%), Positives = 21/60 (35%), Gaps = 4/60 (6%)

Query: 41 KIGEGGFGSVYKGR-LEDGTVVAVNVLSVESKQGETEFMSEVASMANINICHENLVKLHG 99
           +G G FG V++              + V     +     E++ +      H N++ LH 
Sbjct: 12 DLGRGEFGIVHRCVETSSKKTYMAKFVKV-KGTDQVLVKKEISILNIAR--HRNILHLHE 68

>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A Length = 419

 Score = 38.1 bits (89), Expect = 7e-04
 Identities = 14/94 (14%), Positives = 31/94 (32%), Gaps = 15/94 (15%)

Query: 19  YKFSKISYNELKIATNGFR----TSNKIGEGGFGSVYKGR-LEDGTVVAV--------NV 65
           + F  ++ ++  +     R     S  +G G  G V      +    VA+         +
Sbjct: 116 FVFFDLTVDDQSVYPKALRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAI 175

Query: 66  LSVESKQGETEFMSEVASMANINICHENLVKLHG 99
            S           +E+  +  +N  H  ++K+  
Sbjct: 176 GSAREADPALNVETEIEILKKLN--HPCIIKIKN 207

>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A* Length = 330

 Score = 37.7 bits (88), Expect = 8e-04
 Identities = 16/49 (32%), Positives = 24/49 (48%), Gaps = 2/49 (4%)

Query: 25 SYNELKIATNGFRTSNKIGEGGFGSVYKGR-LEDGTVVAVNVLSVESKQ 72
          S   L +  N FR   KIG G FG +  G+ L     VA+ +  ++S+ 
Sbjct: 1  SMGVLMVGPN-FRVGKKIGCGNFGELRLGKNLYTNEYVAIKLEPMKSRA 48

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	174
4gt4_A	308	Tyrosine-protein kinase transmembrane receptor RO;	99.9
4asz_A	299	BDNF/NT-3 growth factors receptor; transferase, TR	99.89
4aoj_A	329	High affinity nerve growth factor receptor; transf	99.89
4fih_A	346	Serine/threonine-protein kinase PAK 4; kinase doma	99.88
4fie_A	423	Serine/threonine-protein kinase PAK 4; kinase doma	99.87
4b9d_A	350	Serine/threonine-protein kinase NEK1; transferase,	99.87
4aw0_A	311	HPDK1, 3-phosphoinositide-dependent protein kinase	99.87
3omv_A	307	RAF proto-oncogene serine/threonine-protein kinas;	99.86
4ase_A	353	Vascular endothelial growth factor receptor 2; tra	99.85
3hyh_A	275	Carbon catabolite-derepressing protein kinase; kin	99.85
3fpq_A	290	Serine/threonine-protein kinase WNK1; protein seri	99.84
4g3f_A	336	NF-kappa-beta-inducing kinase; non-RD kinase, prot	99.83
3ubd_A	304	Ribosomal protein S6 kinase alpha-3; kinase-inhibi	99.82
4g31_A	299	Eukaryotic translation initiation factor 2-alpha;	99.82
3uto_A	573	Twitchin; kinase, muscle sarcomere, transferase; H	99.82
4b99_A	398	Mitogen-activated protein kinase 7; transferase, i	99.81
3hmm_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	99.8
3uim_A	326	Brassinosteroid insensitive 1-associated receptor;	99.78
2qkw_B	321	Protein kinase; three-helix bundle motif, AVRPTO-P	99.77
3v5w_A	689	G-protein coupled receptor kinase 2; inhibitor com	99.75
4f9c_A	361	Cell division cycle 7-related protein kinase; Ser/	99.74
3cbl_A	377	C-FES, proto-oncogene tyrosine-protein kinase FES/	99.73
3s95_A	310	LIMK-1, LIM domain kinase 1; structural genomics,	99.73
3p86_A	309	Serine/threonine-protein kinase CTR1; ETR1, ERS1,	99.72
3fe3_A	328	MAP/microtubule affinity-regulating kinase 3; seri	99.72
4hcu_A	269	Tyrosine-protein kinase ITK/TSK; transferase-trans	99.72
3niz_A	311	Rhodanese family protein; structural genomics, str	99.72
3kul_A	325	Ephrin type-A receptor 8; ATP-binding, kinase, nuc	99.72
3gen_A	283	Tyrosine-protein kinase BTK; bruton'S tyrosine kin	99.72
2c30_A	321	Serine/threonine-protein kinase PAK 6; CRIB domain	99.72
3zgw_A	347	Maternal embryonic leucine zipper kinase; transfer	99.72
2pvf_A	334	Fibroblast growth factor receptor 2; kinase domain	99.72
2yab_A	361	Death-associated protein kinase 2; apoptosis, tran	99.72
3fxz_A	297	Serine/threonine-protein kinase PAK 1; transferase	99.72
2psq_A	370	Fibroblast growth factor receptor 2; kinase domain	99.72
1kob_A	387	Twitchin; kinase, intrasteric regulation; 2.30A {A	99.71
3q5i_A	504	Protein kinase; CDPK, malaria, phosphotransferase,	99.71
3llt_A	360	Serine/threonine kinase-1, pflammer; lammer kinase	99.71
3tki_A	323	Serine/threonine-protein kinase CHK1; cell checkpo	99.71
4aw2_A	437	Serine/threonine-protein kinase MRCK alpha; transf	99.71
1tki_A	321	Titin; serine kinase, muscle, autoinhibition; 2.00	99.71
1qcf_A	454	Haematopoetic cell kinase (HCK); tyrosine kinase-i	99.7
3is5_A	285	Calcium-dependent protein kinase; CDPK, structural	99.7
3sxs_A	268	Cytoplasmic tyrosine-protein kinase BMX; transfera	99.7
4fvq_A	289	Tyrosine-protein kinase JAK2; janus protein kinase	99.7
1o6l_A	337	RAC-beta serine/threonine protein kinase; protein	99.7
1opk_A	495	P150, C-ABL, proto-oncogene tyrosine-protein kinas	99.7
3tt0_A	382	Basic fibroblast growth factor receptor 1; kinase	99.7
2bdw_A	362	Hypothetical protein K11E8.1D; kinase, calmodulin	99.7
3v8s_A	410	RHO-associated protein kinase 1; dimerization, myo	99.7
3lm5_A	327	Serine/threonine-protein kinase 17B; STK17B, serin	99.7
1ob3_A	288	PFPK5, cell division control protein 2 homolog; tr	99.69
4fr4_A	384	YANK1, serine/threonine-protein kinase 32A; struct	99.69
2y0a_A	326	Death-associated protein kinase 1; transferase, ca	99.69
1fmk_A	452	C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyros	99.69
3t9t_A	267	Tyrosine-protein kinase ITK/TSK; kinase domain, al	99.69
2vd5_A	412	DMPK protein; serine/threonine-protein kinase, kin	99.69
3o0g_A	292	Cell division protein kinase 5; kinase activator c	99.69
2qol_A	373	Ephrin receptor; receptor tyrosine kinase, juxtame	99.69
3uc3_A	361	Serine/threonine-protein kinase SRK2I; SNRK2, ABA	99.69
2h8h_A	535	Proto-oncogene tyrosine-protein kinase SRC; SRC ki	99.69
1fot_A	318	TPK1 delta, CAMP-dependent protein kinase type 1;	99.69
2x4f_A	373	Myosin light chain kinase family member 4; LUNG, b	99.69
3kmu_A	271	ILK, integrin-linked kinase; cell adhesion, ANK re	99.69
3hko_A	345	Calcium/calmodulin-dependent protein kinase with d	99.68
2nru_A	307	Interleukin-1 receptor-associated kinase 4; inhibi	99.68
2j7t_A	302	Serine/threonine-protein kinase 10; transferase, A	99.68
3c0i_A	351	Peripheral plasma membrane protein CASK; neurexin,	99.68
3kfa_A	288	Tyrosine-protein kinase ABL1; CML, drug resistance	99.68
4euu_A	319	Serine/threonine-protein kinase TBK1; ATP binding,	99.68
2zv2_A	298	Calcium/calmodulin-dependent protein kinase kinas;	99.68
2y94_A	476	5'-AMP-activated protein kinase catalytic subunit;	99.68
3qd2_B	332	Eukaryotic translation initiation factor 2-alpha;	99.68
2w4o_A	349	Calcium/calmodulin-dependent protein kinase type I	99.68
4eqm_A	294	Protein kinase; transferase; HET: ANP; 3.00A {Stap	99.68
3vhe_A	359	Vascular endothelial growth factor receptor 2; kin	99.68
3gni_B	389	Strad alpha; kinase fold, pseudokinase, alpha heli	99.68
3txo_A	353	PKC-L, NPKC-ETA, protein kinase C ETA type; phosph	99.68
3f3z_A	277	Calcium/calmodulin-dependent protein kinase with d	99.68
2ac3_A	316	MAP kinase-interacting serine/threonine kinase 2;	99.68
3lij_A	494	Calcium/calmodulin dependent protein kinase with A	99.67
3h4j_B	336	AMPK kdaid, SNF1-like protein kinase SSP2; ATP-bin	99.67
3l9p_A	367	Anaplastic lymphoma kinase; kinase domain, ATP-bin	99.67
3ugc_A	295	Tyrosine-protein kinase JAK2; small molecule inhib	99.67
1rdq_E	350	PKA C-alpha, CAMP-dependent protein kinase, alpha-	99.67
4dc2_A	396	Protein kinase C IOTA type; kinase, substrate, cel	99.67
3p1a_A	311	MYT1 kinase, membrane-associated tyrosine- and thr	99.67
3a8x_A	345	Protein kinase C IOTA type; transferase; HET: TPO;	99.67
1xjd_A	345	Protein kinase C, theta type; PKC-theta, ATP, AMP,	99.67
1k9a_A	450	Carboxyl-terminal SRC kinase; COOH-terminal SRC ki	99.67
1qpc_A	279	LCK kinase; alpha beta fold, transferase; HET: PTR	99.67
2pmi_A	317	Negative RE, cyclin-dependent protein kinase PHO85	99.67
3gbz_A	329	Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-	99.67
3a62_A	327	Ribosomal protein S6 kinase beta-1; kinase domain,	99.67
3kk8_A	284	Calcium/calmodulin dependent protein kinase II; AT	99.66
3n9x_A	432	Phosphotransferase; malaria kinase, structural gen	99.66
1luf_A	343	Muscle-specific tyrosine kinase receptor MUSK; pho	99.66
2buj_A	317	Serine/threonine-protein kinase 16; transferase, A	99.66
3uqc_A	286	Probable conserved transmembrane protein; structur	99.66
3soa_A	444	Calcium/calmodulin-dependent protein kinase type a	99.66
1rjb_A	344	FL cytokine receptor; kinase, structure, autoinhib	99.66
3cok_A	278	Serine/threonine-protein kinase PLK4; POLO-like ki	99.66
2ivs_A	314	Proto-oncogene tyrosine-protein kinase receptor RE	99.66
1p4o_A	322	Insulin-like growth factor I receptor protein; IGF	99.66
1t46_A	313	HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcom	99.66
3mwu_A	486	Calmodulin-domain protein kinase 1; serine/threoni	99.66
4f0f_A	287	Serine/threonine-protein kinase ROCO4; LRRK2, ATP-	99.66
2ozo_A	613	Tyrosine-protein kinase ZAP-70; inactive ZAP-70, t	99.66
3nyv_A	484	Calmodulin-domain protein kinase 1; serine/threoni	99.66
2yex_A	276	Serine/threonine-protein kinase CHK1; transferase,	99.66
4agu_A	311	Cyclin-dependent kinase-like 1; transferase, phosp	99.66
4eut_A	396	Serine/threonine-protein kinase TBK1; ATP binding,	99.66
2jam_A	304	Calcium/calmodulin-dependent protein kinase type 1	99.66
3dtc_A	271	Mitogen-activated protein kinase kinase kinase 9;	99.65
2a2a_A	321	Death-associated protein kinase 2; autoinhibition,	99.65
2x7f_A	326	TRAF2 and NCK-interacting protein kinase; serine/t	99.65
3dbq_A	343	Dual specificity protein kinase TTK; MPS1 structur	99.65
3qup_A	323	Tyrosine-protein kinase receptor TYRO3; protein ki	99.65
2yfx_A	327	Tyrosine-protein kinase receptor; nucleotide-bindi	99.65
2eue_A	275	Carbon catabolite derepressing protein kinase; kin	99.65
2xir_A	316	Vascular endothelial growth factor receptor 2; ang	99.65
3soc_A	322	Activin receptor type-2A; structural genomics cons	99.65
3an0_A	340	Dual specificity mitogen-activated protein kinase;	99.65
3i6u_A	419	CDS1, serine/threonine-protein kinase CHK2; Ser/Th	99.65
3bhy_A	283	Death-associated protein kinase 3; death associate	99.65
1u59_A	287	Tyrosine-protein kinase ZAP-70; transferase; HET:	99.65
3c4z_A	543	Rhodopsin kinase; Ser/Thr kinase, RGS homology dom	99.64
4e5w_A	302	Tyrosine-protein kinase JAK1; kinase domain, trans	99.64
3a7i_A	303	MST3 kinase, serine/threonine kinase 24 (STE20 hom	99.64
3ork_A	311	Serine/threonine protein kinase; structural genomi	99.64
3rp9_A	458	Mitogen-activated protein kinase; structural genom	99.64
2vwi_A	303	Serine/threonine-protein kinase OSR1; STE kinase,	99.64
3pg1_A	362	Mitogen-activated protein kinase, putative (MAP K	99.64
1x8b_A	289	WEE1HU, WEE1-like protein kinase; cell cycle, tran	99.64
2acx_A	576	G protein-coupled receptor kinase 6; GRK, G transf	99.64
2rku_A	294	Serine/threonine-protein kinase PLK1; structure of	99.64
3fdn_A	279	Serine/threonine-protein kinase 6; aurora kinase i	99.64
2w1i_A	326	JAK2; chromosomal rearrangement, nucleotide-bindin	99.64
2owb_A	335	Serine/threonine-protein kinase PLK1; catalytic do	99.64
3brb_A	313	Proto-oncogene tyrosine-protein kinase MER; ATP-bi	99.64
4ejn_A	446	RAC-alpha serine/threonine-protein kinase; AKT1, a	99.63
2i0e_A	353	Protein kinase C-beta II; serine/threonine protein	99.63
1xbb_A	291	Tyrosine-protein kinase SYK; gleevec, STI-571, ima	99.63
2h6d_A	276	5'-AMP-activated protein kinase catalytic subunit	99.63
2wei_A	287	Calmodulin-domain protein kinase 1, putative; nucl	99.63
2wqm_A	310	Serine/threonine-protein kinase NEK7; ATP-binding,	99.63
1mp8_A	281	Focal adhesion kinase 1; tyrosine protein kinase,	99.63
1u5q_A	348	Serine/threonine protein kinase TAO2; transferase;	99.63
3lxl_A	327	Tyrosine-protein kinase JAK3; TYK2, inflammation,	99.63
1ua2_A	346	CAK, cell division protein kinase 7; cell cycle, p	99.63
3eqc_A	360	Dual specificity mitogen-activated protein kinase;	99.63
1mqb_A	333	Ephrin type-A receptor 2; tyrosine protein kinase,	99.63
2i1m_A	333	Macrophage colony-stimulating factor 1 receptor; k	99.63
2vgo_A	284	Serine/threonine-protein kinase 12-A; nucleotide-b	99.63
3kn6_A	325	Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1	99.62
2qr7_A	342	Ribosomal protein S6 kinase alpha-3; kinase domain	99.62
4aaa_A	331	Cyclin-dependent kinase-like 2; transferase, phosp	99.62
3lb7_A	307	RAF proto-oncogene serine/threonine-protein kinas;	99.62
3mtl_A	324	Cell division protein kinase 16; pctaire1, indirub	99.62
2w5a_A	279	Serine/threonine-protein kinase NEK2; Ser/Thr prot	99.62
2r5t_A	373	Serine/threonine-protein kinase SGK1; AGC protein	99.62
2h34_A	309	Serine/threonine-protein kinase PKNE; apoenzyme, t	99.62
2izr_A	330	Casein kinase I isoform gamma-3; serine/threonine-	99.62
2ycf_A	322	Serine/threonine-protein kinase CHK2; transferase,	99.62
2pml_X	348	PFPK7, Ser/Thr protein kinase; phosphorylati trans	99.62
3eb0_A	383	Putative uncharacterized protein; kinase cryptospo	99.62
3og7_A	289	AKAP9-BRAF fusion protein; proto-oncogene, V600E,	99.61
2y4i_B	319	KSR2, HKSR2, kinase suppressor of RAS 2; transfera	99.61
3fme_A	290	Dual specificity mitogen-activated protein kinase;	99.61
3lxp_A	318	Non-receptor tyrosine-protein kinase TYK2; JAK3, i	99.61
2i6l_A	320	Mitogen-activated protein kinase 6; MAPK6, ERK3, e	99.61
3e7e_A	365	HBUB1, BUB1A, mitotic checkpoint serine/threonine-	99.61
2clq_A	295	Mitogen-activated protein kinase kinase kinase 5;	99.61
1phk_A	298	Phosphorylase kinase; glycogen metabolism, transfe	99.61
3cek_A	313	Dual specificity protein kinase TTK; HMPS1, PYT, E	99.61
3poz_A	327	Epidermal growth factor receptor; kinase domain, a	99.61
3dls_A	335	PAS domain-containing serine/threonine-protein KI;	99.61
2r3i_A	299	Cell division protein kinase 2; serine/threonine-p	99.61
2zmd_A	390	Dual specificity protein kinase TTK; MPS1, T686A,	99.61
3com_A	314	Serine/threonine-protein kinase 4; MST1, STE20-lik	99.61
3pls_A	298	Macrophage-stimulating protein receptor; protein k	99.61
1cm8_A	367	Phosphorylated MAP kinase P38-gamma; phosphorylati	99.61
3mi9_A	351	Cell division protein kinase 9; P-TEFB, HIV-1, pro	99.61
3ttj_A	464	Mitogen-activated protein kinase 10; JNK3, protein	99.61
3ll6_A	337	Cyclin G-associated kinase; transferase, protein k	99.6
1t4h_A	290	Serine/threonine-protein kinase WNK1; protein seri	99.6
1fvr_A	327	Tyrosine-protein kinase TIE-2; tyrosine kinase, tr	99.6
2wtk_C	305	Serine/threonine-protein kinase 11; transferase-me	99.6
3nsz_A	330	CK II alpha, casein kinase II subunit alpha; inhib	99.59
3kex_A	325	Receptor tyrosine-protein kinase ERBB-3; kinase do	99.59
3f66_A	298	Hepatocyte growth factor receptor; C-Met, protein	99.59
1zy4_A	303	Serine/threonine-protein kinase GCN2; translation	99.59
2vuw_A	336	Serine/threonine-protein kinase haspin; cell cycle	99.59
2y7j_A	365	Phosphorylase B kinase gamma catalytic chain, test	99.59
4fl3_A	635	Tyrosine-protein kinase SYK; transferase; HET: ANP	99.58
1vzo_A	355	Ribosomal protein S6 kinase alpha 5; protein kinas	99.58
3lzb_A	327	Epidermal growth factor receptor; epidermal growth	99.58
4exu_A	371	Mitogen-activated protein kinase 13; P38 kinase, t	99.58
2v62_A	345	Serine/threonine-protein kinase VRK2; transferase,	99.58
3pfq_A	674	PKC-B, PKC-beta, protein kinase C beta type; phosp	99.58
3qyz_A	364	Mitogen-activated protein kinase 1; transferase, s	99.58
3cc6_A	281	Protein tyrosine kinase 2 beta; focal adhesion kin	99.57
3c1x_A	373	Hepatocyte growth factor receptor; receptor tyrosi	99.57
3oz6_A	388	Mitogen-activated protein kinase 1, serine/threon	99.57
2fst_X	367	Mitogen-activated protein kinase 14; active mutant	99.57
2iwi_A	312	Serine/threonine-protein kinase PIM-2; nucleotide-	99.57
3q4u_A	301	Activin receptor type-1; structural genomics conso	99.57
1byg_A	278	CSK, protein (C-terminal SRC kinase); protein kina	99.57
2b9h_A	353	MAP kinase FUS3, mitogen-activated protein kinase	99.57
3aln_A	327	Dual specificity mitogen-activated protein kinase;	99.56
3coi_A	353	Mitogen-activated protein kinase 13; P38D, P38delt	99.56
2eva_A	307	TAK1 kinase - TAB1 chimera fusion protein; transfe	99.56
2xrw_A	371	Mitogen-activated protein kinase 8; transcription,	99.56
2j0j_A	656	Focal adhesion kinase 1; cell migration, FERM, tra	99.56
3mdy_A	337	Bone morphogenetic protein receptor type-1B; compl	99.56
2pzi_A	681	Probable serine/threonine-protein kinase PKNG; ATP	99.55
3kvw_A	429	DYRK2, dual specificity tyrosine-phosphorylation-r	99.55
1b6c_B	342	TGF-B superfamily receptor type I; complex (isomer	99.55
1csn_A	298	Casein kinase-1; phosphotransferase; HET: ATP; 2.0	99.55
2a19_B	284	Interferon-induced, double-stranded RNA-activated	99.55
1u46_A	291	ACK-1, activated CDC42 kinase 1; tyrosine kinase,	99.54
1j1b_A	420	Glycogen synthase kinase-3 beta; complex, TAU, AMP	99.54
1nxk_A	400	MAP kinase-activated protein kinase 2; MK2, phosph	99.54
1wak_A	397	Serine/threonine-protein kinase SPRK1; SRPK, trans	99.54
3byv_A	377	Rhoptry kinase; malaria, transferase, structural g	99.53
2dyl_A	318	Dual specificity mitogen-activated protein kinase	99.53
3a99_A	320	Proto-oncogene serine/threonine-protein kinase PI;	99.53
3g33_A	308	Cell division protein kinase 4; Ser/Thr protein ki	99.53
1blx_A	326	Cyclin-dependent kinase 6; inhibitor protein, cycl	99.53
3rgf_A	405	Cyclin-dependent kinase 8; protein kinase complex,	99.53
3op5_A	364	Serine/threonine-protein kinase VRK1; adenosine tr	99.51
3m2w_A	299	MAP kinase-activated protein kinase 2; small molec	99.51
3e3p_A	360	Protein kinase, putative glycogen synthase kinase;	99.51
3p23_A	432	Serine/threonine-protein kinase/endoribonuclease;	99.5
3fhr_A	336	MAP kinase-activated protein kinase 3; kinase-inhi	99.5
3gxj_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	99.5
4e7w_A	394	Glycogen synthase kinase 3; GSK3, PTyr195, transfe	99.5
3qa8_A	676	MGC80376 protein; kinase ubiquitin-like domain, ph	99.49
1z57_A	339	Dual specificity protein kinase CLK1; protein tyro	99.49
2rio_A	434	Serine/threonine-protein kinase/endoribonuclease I	99.49
3g2f_A	336	Bone morphogenetic protein receptor type-2; kinase	99.48
2jii_A	352	Serine/threonine-protein kinase VRK3 molecule: VA	99.48
3uzp_A	296	CKI-delta, CKID, casein kinase I isoform delta; CK	99.46
2eu9_A	355	Dual specificity protein kinase CLK3; kinase domai	99.46
3sv0_A	483	Casein kinase I-like; typical kinase domain fold,	99.45
4hgt_A	296	Casein kinase I isoform delta; CK1D, inhibitor, tr	99.45
2vx3_A	382	Dual specificity tyrosine-phosphorylation- regula	99.43
1q8y_A	373	SR protein kinase; transferase; HET: ADP ADE; 2.05	99.43
3q60_A	371	ROP5B; pseudokinase, transferase; HET: ATP; 1.72A	99.38
1zar_A	282	RIO2 kinase; serine kinase, winged-helix, RIO doma	99.28
3dzo_A	413	Rhoptry kinase domain; parasitic disease, transfer	99.2
3en9_A	540	Glycoprotease, O-sialoglycoprotein endopeptidase/p	99.18
4azs_A	569	Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15	99.01
1zth_A	258	RIO1 serine protein kinase; ribosome biogenesis, r	98.98
4gyi_A	397	RIO2 kinase; protein kinase, ADP complex, phosphoa	98.83
3tm0_A	263	Aminoglycoside 3'-phosphotransferase; protein kina	98.1
3d1u_A	288	Putative fructosamine-3-kinase; YP_290396.1, struc	97.3
1nd4_A	264	Aminoglycoside 3'-phosphotransferase; protein kina	97.23
3dxp_A	359	Putative acyl-COA dehydrogenase; protein kinase-li	97.06
3r70_A	320	Aminoglycoside phosphotransferase; structural geno	95.34
4gkh_A	272	Aminoglycoside 3'-phosphotransferase APHA1-IAB; py	95.12
3f7w_A	288	Putative fructosamine-3-kinase; YP_290396.1, struc	94.71
3tdw_A	306	Gentamicin resistance protein; kinase, phosphoryl	93.44
3ovc_A	362	Hygromycin-B 4-O-kinase; aminoglycoside phosphotra	93.3
3jr1_A	312	Putative fructosamine-3-kinase; YP_719053.1, struc	92.98
3sg8_A	304	APH(2'')-ID; antibiotic resistance enzyme, transfe	92.75
3ats_A	357	Putative uncharacterized protein; hypothetical pro	92.64
2olc_A	397	MTR kinase, methylthioribose kinase; kinase ADP-2H	90.63
3cxl_A	463	N-chimerin; SH2, RHO-GAP, structural genomics cons	89.62

>4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A

Probab=99.90  E-value=2e-23  Score=151.07  Aligned_cols=133  Identities=21%  Similarity=0.221  Sum_probs=100.7

Q ss_pred             CCeeecceecccCCeeEEEEEEc------CCCEEEEEEeeccC-ccchhHHHHHHHHHhcccccCCCeeeeecceecCCC
Q 039630           34 NGFRTSNKIGEGGFGSVYKGRLE------DGTVVAVNVLSVES-KQGETEFMSEVASMANINICHENLVKLHGGCIDGPS  106 (174)
Q Consensus        34 ~~~~~~~~lg~G~~g~V~~~~~~------~~~~~avK~~~~~~-~~~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~~~~~  106 (174)
                      ++++..+.||+|+||.||+|.+.      +++.||||.++... ....+.+.+|+.++++++  ||||++++|+|...+.
T Consensus        26 ~~~~~~~~lG~G~fG~Vykg~~~~~~~~~~~~~VAvK~l~~~~~~~~~~~f~~E~~il~~l~--HpNIV~l~g~~~~~~~  103 (308)
T 4gt4_A           26 SAVRFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQ--HPNVVCLLGVVTKDQP  103 (308)
T ss_dssp             GGEEEEEEEEECSSCEEEEEEEC-------CEEEEEEECCC-CCC-CHHHHHHHHHHHHHCC--CTTBCCEEEEECSSSS
T ss_pred             HHCeEeeEeccCCCcEEEEEEEcCCccCCCCeEEEEEEECcccChHHHHHHHHHHHHHHhCC--CCCCCCcceEEEECCE
Confidence            45677899999999999999852      46789999997553 344678999999999999  9999999999999999


Q ss_pred             cccchhhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhcc
Q 039630          107 RILAPLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEI  170 (174)
Q Consensus       107 ~~lv~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  170 (174)
                      .++|+  |+++++.|...+.....................+++..++.++.|||.||+|||++.
T Consensus       104 ~~lV~--Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~  165 (308)
T 4gt4_A          104 LSMIF--SYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYLSSHH  165 (308)
T ss_dssp             CEEEE--ECCSSCBHHHHHHTTCSSCCCC-----CCEECCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             EEEEE--EcCCCCcHHHHHHhhCccccccccccccccccCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            99999  888888887766433221111111111222346899999999999999999999864

>4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A*

Probab=99.89  E-value=2.6e-23  Score=149.98  Aligned_cols=132  Identities=23%  Similarity=0.339  Sum_probs=102.3

Q ss_pred             hcCCeeecceecccCCeeEEEEEEc------CCCEEEEEEeeccCccchhHHHHHHHHHhcccccCCCeeeeecceecCC
Q 039630           32 ATNGFRTSNKIGEGGFGSVYKGRLE------DGTVVAVNVLSVESKQGETEFMSEVASMANINICHENLVKLHGGCIDGP  105 (174)
Q Consensus        32 ~~~~~~~~~~lg~G~~g~V~~~~~~------~~~~~avK~~~~~~~~~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~~~~  105 (174)
                      ..++|.+.+.||+|+||.||+|.+.      ++..||||.++.......+.+.+|+.+|++++  ||||++++|++.+.+
T Consensus        11 ~r~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l~--HpnIV~l~g~~~~~~   88 (299)
T 4asz_A           11 KRHNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQ--HEHIVKFYGVCVEGD   88 (299)
T ss_dssp             CGGGEEEEEEEEC--CCCEEEEEECSCC----CEEEEEEEECSCCHHHHHHHHHHHHHHTTCC--CTTBCCEEEEECSSS
T ss_pred             CHHHeEEeeEEeeCCCcEEEEEEECCcccCCCCEEEEEEEeCCCChHHHHHHHHHHHHHHhCC--CCCCccEEEEEeeCC
Confidence            3467889999999999999999853      47789999998665556778999999999999  999999999999999


Q ss_pred             CcccchhhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhcc
Q 039630          106 SRILAPLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEI  170 (174)
Q Consensus       106 ~~~lv~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  170 (174)
                      ..++|+  |+++++.|...+...+.....   .........+++..++.++.|||.||+|||++.
T Consensus        89 ~~~lV~--Ey~~~G~L~~~l~~~~~~~~~---~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~  148 (299)
T 4asz_A           89 PLIMVF--EYMKHGDLNKFLRAHGPDAVL---MAEGNPPTELTQSQMLHIAQQIAAGMVYLASQH  148 (299)
T ss_dssp             SEEEEE--ECCTTCBHHHHHHHTSHHHHH---C----CCCCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             EEEEEE--EcCCCCcHHHHHHhcCccccc---ccccCCCCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            999999  888888887766433211100   001122346899999999999999999999863

>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens}

Probab=99.89  E-value=8.2e-23  Score=149.16  Aligned_cols=134  Identities=19%  Similarity=0.289  Sum_probs=103.7

Q ss_pred             hcCCeeecceecccCCeeEEEEEEc------CCCEEEEEEeeccCccchhHHHHHHHHHhcccccCCCeeeeecceecCC
Q 039630           32 ATNGFRTSNKIGEGGFGSVYKGRLE------DGTVVAVNVLSVESKQGETEFMSEVASMANINICHENLVKLHGGCIDGP  105 (174)
Q Consensus        32 ~~~~~~~~~~lg~G~~g~V~~~~~~------~~~~~avK~~~~~~~~~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~~~~  105 (174)
                      ..+++.+.+.||+|+||.||+|.++      ++..||||+++.......+.+.+|+.+|++++  ||||++++|+|.+.+
T Consensus        39 ~~~d~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l~--HpnIV~l~g~~~~~~  116 (329)
T 4aoj_A           39 KRRDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQ--HQHIVRFFGVCTEGR  116 (329)
T ss_dssp             CGGGEEEEEEEEECSSEEEEEEEESSSCC---CEEEEEEEESCCSHHHHHHHHHHHHHHTTCC--CTTBCCEEEEECSSS
T ss_pred             CHHHeEEEEEEccCCCcEEEEEEECCcccCCCCeEEEEEEECcCCHHHHHHHHHHHHHHHhCC--CCCCCcEEEEEEECC
Confidence            4467888999999999999999853      47799999998665556778999999999999  999999999999999


Q ss_pred             CcccchhhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhcc
Q 039630          106 SRILAPLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEI  170 (174)
Q Consensus       106 ~~~lv~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  170 (174)
                      ..++|+  |+++++.|...+.......... .........++++..++.++.|||.||+|||++.
T Consensus       117 ~~~lV~--Ey~~~G~L~~~l~~~~~~~~~~-~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~  178 (329)
T 4aoj_A          117 PLLMVF--EYMRHGDLNRFLRSHGPDAKLL-AGGEDVAPGPLGLGQLLAVASQVAAGMVYLAGLH  178 (329)
T ss_dssp             SEEEEE--ECCTTCBHHHHHHTSSCC------------CCSCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             EEEEEE--EcCCCCcHHHHHHhcCcccccc-cccccccCCCCCHHHHHHHHHHHHHHHHHHhcCC
Confidence            999999  8888888877554332211100 0001122346899999999999999999999753

>4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A*

Probab=99.88  E-value=1.4e-22  Score=148.35  Aligned_cols=116  Identities=22%  Similarity=0.280  Sum_probs=100.6

Q ss_pred             CCeeecceecccCCeeEEEEE-EcCCCEEEEEEeeccCccchhHHHHHHHHHhcccccCCCeeeeecceecCCCcccchh
Q 039630           34 NGFRTSNKIGEGGFGSVYKGR-LEDGTVVAVNVLSVESKQGETEFMSEVASMANINICHENLVKLHGGCIDGPSRILAPL  112 (174)
Q Consensus        34 ~~~~~~~~lg~G~~g~V~~~~-~~~~~~~avK~~~~~~~~~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~~~~~~~lv~~  112 (174)
                      ..|+..+.||+|+||.||+|. ..+|+.||+|+++.......+.+.+|+.+|+.++  ||||+++++++.+.+..++|+ 
T Consensus        74 ~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~--HpnIV~l~~~~~~~~~~~ivm-  150 (346)
T 4fih_A           74 SYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQ--HENVVEMYNSYLVGDELWVVM-  150 (346)
T ss_dssp             GTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCSSGGGGHHHHHHHHHCC--CTTBCCEEEEEEETTEEEEEE-
T ss_pred             HhcEEeEEeecCcCeEEEEEEECCCCCEEEEEEEecCchhHHHHHHHHHHHHHhCC--CCCCCcEEEEEEECCEEEEEE-
Confidence            469999999999999999999 5679999999998766566777899999999999  999999999999999999998 


Q ss_pred             hhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhcc
Q 039630          113 QASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEI  170 (174)
Q Consensus       113 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  170 (174)
                       |+++++.|...+.                 ...+++..+..++.||+.||+|||++.
T Consensus       151 -Ey~~gg~L~~~l~-----------------~~~l~e~~~~~~~~qi~~aL~ylH~~~  190 (346)
T 4fih_A          151 -EFLEGGALTDIVT-----------------HTRMNEEQIAAVCLAVLQALSVLHAQG  190 (346)
T ss_dssp             -CCCTTEEHHHHHH-----------------HSCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             -eCCCCCcHHHHHH-----------------cCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence             8888877765331                 124789999999999999999999863

>4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens}

Probab=99.87  E-value=3.2e-22  Score=149.78  Aligned_cols=117  Identities=22%  Similarity=0.289  Sum_probs=101.3

Q ss_pred             cCCeeecceecccCCeeEEEEE-EcCCCEEEEEEeeccCccchhHHHHHHHHHhcccccCCCeeeeecceecCCCcccch
Q 039630           33 TNGFRTSNKIGEGGFGSVYKGR-LEDGTVVAVNVLSVESKQGETEFMSEVASMANINICHENLVKLHGGCIDGPSRILAP  111 (174)
Q Consensus        33 ~~~~~~~~~lg~G~~g~V~~~~-~~~~~~~avK~~~~~~~~~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~~~~~~~lv~  111 (174)
                      .+.|+.++.||+|+||.||+|. ..+|+.||+|+++.......+.+.+|+.+|+.++  ||||+++++++.+.+..++|+
T Consensus       150 ~~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~--HpnIV~l~~~~~~~~~~~iVm  227 (423)
T 4fie_A          150 RSYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQ--HENVVEMYNSYLVGDELWVVM  227 (423)
T ss_dssp             GGTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESTTCSSGGGHHHHHHHHHHCC--CTTBCCEEEEEEETTEEEEEE
T ss_pred             hHhcEeeeEeccCcCcEEEEEEECCCCCEEEEEEEeccchhHHHHHHHHHHHHHhCC--CCCCCceEEEEEECCEEEEEE
Confidence            3569999999999999999999 5679999999998776666778999999999999  999999999999999999998


Q ss_pred             hhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhcc
Q 039630          112 LQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEI  170 (174)
Q Consensus       112 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  170 (174)
                        |+++++.|...+                 ....+++..+..++.||+.||+|||++.
T Consensus       228 --Ey~~gG~L~~~i-----------------~~~~l~e~~~~~~~~qil~aL~ylH~~~  267 (423)
T 4fie_A          228 --EFLEGGALTDIV-----------------THTRMNEEQIAAVCLAVLQALSVLHAQG  267 (423)
T ss_dssp             --ECCTTEEHHHHH-----------------HHSCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             --eCCCCCcHHHHH-----------------hccCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence              888877776532                 1124789999999999999999999863

>4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A*

Probab=99.87  E-value=3.4e-22  Score=146.48  Aligned_cols=119  Identities=24%  Similarity=0.302  Sum_probs=94.2

Q ss_pred             CCeeecceecccCCeeEEEEE-EcCCCEEEEEEeeccC--ccchhHHHHHHHHHhcccccCCCeeeeecceecCCCcccc
Q 039630           34 NGFRTSNKIGEGGFGSVYKGR-LEDGTVVAVNVLSVES--KQGETEFMSEVASMANINICHENLVKLHGGCIDGPSRILA  110 (174)
Q Consensus        34 ~~~~~~~~lg~G~~g~V~~~~-~~~~~~~avK~~~~~~--~~~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~~~~~~~lv  110 (174)
                      ++|++++.||+|+||.||+|. ..+|+.||+|+++...  ....+.+.+|+.+++.++  ||||+++++++.+.+..++|
T Consensus        24 e~Y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~--HpnIV~~~~~~~~~~~~yiV  101 (350)
T 4b9d_A           24 EKYVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMK--HPNIVQYRESFEENGSLYIV  101 (350)
T ss_dssp             CCEEEEEEC------CEEEEEETTTCCEEEEEEEECTTSCHHHHHHHHHHHHHHHHCC--CTTBCCEEEEEEETTEEEEE
T ss_pred             cceEEeEEEecCCCeEEEEEEECCCCCEEEEEEEehHHCCHHHHHHHHHHHHHHHHCC--CCCCCcEEEEEEECCEEEEE
Confidence            579999999999999999999 5679999999997652  334567999999999999  99999999999999999999


Q ss_pred             hhhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhcc
Q 039630          111 PLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEI  170 (174)
Q Consensus       111 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  170 (174)
                      +  |+++++.|...+..              .....+++..++.++.||+.||+|||++.
T Consensus       102 m--Ey~~gg~L~~~i~~--------------~~~~~~~e~~~~~~~~qi~~aL~ylH~~~  145 (350)
T 4b9d_A          102 M--DYCEGGDLFKRINA--------------QKGVLFQEDQILDWFVQICLALKHVHDRK  145 (350)
T ss_dssp             E--ECCTTCBHHHHHHH--------------TTTCCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             E--eCCCCCcHHHHHHH--------------cCCCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            8  88888887764421              12234788999999999999999999753

>4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ...

Probab=99.87  E-value=3e-22  Score=144.62  Aligned_cols=117  Identities=21%  Similarity=0.239  Sum_probs=100.6

Q ss_pred             CCeeecceecccCCeeEEEEE-EcCCCEEEEEEeecc---CccchhHHHHHHHHHhcccccCCCeeeeecceecCCCccc
Q 039630           34 NGFRTSNKIGEGGFGSVYKGR-LEDGTVVAVNVLSVE---SKQGETEFMSEVASMANINICHENLVKLHGGCIDGPSRIL  109 (174)
Q Consensus        34 ~~~~~~~~lg~G~~g~V~~~~-~~~~~~~avK~~~~~---~~~~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~~~~~~~l  109 (174)
                      ++|++++.||+|+||.||+|. ..+++.||+|+++..   .......+.+|+.+|+.++  ||||+++++++.+.+..++
T Consensus        32 ~dy~i~~~lG~G~fg~V~~a~~~~~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l~--HpnIv~l~~~~~~~~~~yi  109 (311)
T 4aw0_A           32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLD--HPFFVKLYFTFQDDEKLYF  109 (311)
T ss_dssp             GGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCC--CTTBCCEEEEEECSSEEEE
T ss_pred             cccEEEEEEecccCeEEEEEEECCCCCEEEEEEEEHHHCCCHHHHHHHHHHHHHHHhCC--CCCCCeEEEEEEeCCEEEE
Confidence            469999999999999999999 667999999999754   2344667999999999999  9999999999999999999


Q ss_pred             chhhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhcc
Q 039630          110 APLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEI  170 (174)
Q Consensus       110 v~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  170 (174)
                      |+  |+.+++.|...+.                +...+++..+..++.||+.||+|||++.
T Consensus       110 vm--Ey~~gG~L~~~i~----------------~~~~l~e~~~~~~~~qi~~al~ylH~~~  152 (311)
T 4aw0_A          110 GL--SYAKNGELLKYIR----------------KIGSFDETCTRFYTAEIVSALEYLHGKG  152 (311)
T ss_dssp             EE--CCCTTEEHHHHHH----------------HHSSCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             EE--ecCCCCCHHHHHH----------------HcCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            98  8888888876442                2235899999999999999999999863

>3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens}

Probab=99.86  E-value=5e-22  Score=143.51  Aligned_cols=122  Identities=28%  Similarity=0.409  Sum_probs=99.1

Q ss_pred             hhHHhhcCCeeecceecccCCeeEEEEEEcCCCEEEEEEeeccC--ccchhHHHHHHHHHhcccccCCCeeeeecceecC
Q 039630           27 NELKIATNGFRTSNKIGEGGFGSVYKGRLEDGTVVAVNVLSVES--KQGETEFMSEVASMANINICHENLVKLHGGCIDG  104 (174)
Q Consensus        27 ~~~~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~avK~~~~~~--~~~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~~~  104 (174)
                      ..|++..+++.+.+.||+|+||.||+|.+..  .||||+++...  ....+.+.+|+.++++++  ||||++++|++.. 
T Consensus        29 ~~Wei~~~~l~l~~~iG~G~fG~Vy~~~~~~--~vAvK~~~~~~~~~~~~~~f~~E~~il~~l~--HpNIV~l~g~~~~-  103 (307)
T 3omv_A           29 YYWEIEASEVMLSTRIGSGSFGTVYKGKWHG--DVAVKILKVVDPTPEQFQAFRNEVAVLRKTR--HVNILLFMGYMTK-  103 (307)
T ss_dssp             CCCBCCTTSCCEEEECCCCSSSEEEEEESSS--EEEEEECCCSSCCHHHHHHHHHHHHHHTTCC--CTTBCCEEEEECS-
T ss_pred             cCcEEcHHHeEEeeEEeeCCCcEEEEEEECC--cEEEEEEEecCCCHHHHHHHHHHHHHHHhCC--CCCEeeEEEEEEC-
Confidence            4577778889999999999999999998643  59999997542  334567999999999999  9999999998754 


Q ss_pred             CCcccchhhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhcc
Q 039630          105 PSRILAPLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEI  170 (174)
Q Consensus       105 ~~~~lv~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  170 (174)
                      +..++|+  |+++++.|...+.               .....+++..++.++.|||.||+|||++.
T Consensus       104 ~~~~iVm--Ey~~gGsL~~~l~---------------~~~~~l~~~~~~~i~~qia~gL~yLH~~~  152 (307)
T 3omv_A          104 DNLAIVT--QWCEGSSLYKHLH---------------VQETKFQMFQLIDIARQTAQGMDYLHAKN  152 (307)
T ss_dssp             SSCEEEE--ECCSSCBHHHHHH---------------TSCCCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             CeEEEEE--EcCCCCCHHHHHh---------------hcCCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            5677777  8888888776442               12235899999999999999999999853

>4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A*

Probab=99.85  E-value=3.6e-21  Score=141.61  Aligned_cols=144  Identities=18%  Similarity=0.230  Sum_probs=105.8

Q ss_pred             echhhHHhhcCCeeecceecccCCeeEEEEEEc------CCCEEEEEEeeccC-ccchhHHHHHHHHHhcccccCCCeee
Q 039630           24 ISYNELKIATNGFRTSNKIGEGGFGSVYKGRLE------DGTVVAVNVLSVES-KQGETEFMSEVASMANINICHENLVK   96 (174)
Q Consensus        24 ~~~~~~~~~~~~~~~~~~lg~G~~g~V~~~~~~------~~~~~avK~~~~~~-~~~~~~~~~e~~~l~~l~~~h~~i~~   96 (174)
                      +..++|+++.++|++.+.||+|+||.||+|.+.      +++.||||.++... ......+.+|+.+|.++. .||||++
T Consensus        54 ~~~~~wEi~~~~~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~k~VAvK~l~~~~~~~~~~~~~~E~~il~~l~-hhpnIV~  132 (353)
T 4ase_A           54 YDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIG-HHLNVVN  132 (353)
T ss_dssp             CCHHHHBCCGGGEEEEEEEEECSSEEEEEEEEETSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHC-CCTTBCC
T ss_pred             CCCcccEecHHHeEEeeEEecCCCeEEEEEEEcCCCcccCCeEEEEEEEccccChHHHHHHHHHHHHHHHcC-CCCcEEE
Confidence            445688899999999999999999999999843      23589999997553 334567999999999997 2499999


Q ss_pred             eecceecC-CCcccchhhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhcc
Q 039630           97 LHGGCIDG-PSRILAPLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEI  170 (174)
Q Consensus        97 ~~~~~~~~-~~~~lv~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  170 (174)
                      ++|+|..+ +..++|+  |+++++.|...+.....................+++..++.++.|||.||+|||++.
T Consensus       133 l~g~~~~~~~~~~iV~--Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~yLH~~~  205 (353)
T 4ase_A          133 LLGACTKPGGPLMVIV--EFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRK  205 (353)
T ss_dssp             EEEEECCTTSCCEEEE--ECCTTEEHHHHHHHTGGGBCCC-------CTTCBCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             EEEEEEecCCEEEEEE--EcCCCCCHHHHHHhcccccccccccchhhccccCCHHHHHHHHHHHHHHHHhHhhCC
Confidence            99999765 4578888  888888887765432211100000001112345899999999999999999999864

>3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A

Probab=99.85  E-value=2.9e-21  Score=137.54  Aligned_cols=116  Identities=19%  Similarity=0.263  Sum_probs=92.2

Q ss_pred             CCeeecceecccCCeeEEEEE-EcCCCEEEEEEeeccC---ccchhHHHHHHHHHhcccccCCCeeeeecceecCCCccc
Q 039630           34 NGFRTSNKIGEGGFGSVYKGR-LEDGTVVAVNVLSVES---KQGETEFMSEVASMANINICHENLVKLHGGCIDGPSRIL  109 (174)
Q Consensus        34 ~~~~~~~~lg~G~~g~V~~~~-~~~~~~~avK~~~~~~---~~~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~~~~~~~l  109 (174)
                      ++|++.+.||+|+||.||+|. ..+++.||+|+++...   ......+.+|+.+++.++  ||||+++++++.+.+..++
T Consensus        13 g~Y~i~~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~--HpnIv~~~~~~~~~~~~~i   90 (275)
T 3hyh_A           13 GNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLR--HPHIIKLYDVIKSKDEIIM   90 (275)
T ss_dssp             -CCEEEEEEEC---CCEEEEECTTTCCEEEEEEEECC------CHHHHHHHHHHHHHCC--CTTBCCEEEEEECSSEEEE
T ss_pred             eCeEEEEEEecCcCeEEEEEEECCCCCEEEEEEEeHHHcCCHHHHHHHHHHHHHHHHCC--CCCCCeEEEEEEECCEEEE
Confidence            579999999999999999999 5679999999997552   334567899999999999  9999999999999999999


Q ss_pred             chhhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhcc
Q 039630          110 APLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEI  170 (174)
Q Consensus       110 v~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  170 (174)
                      |+  |+.+ +.+...+.                ....+++..+..++.||+.||+|||++.
T Consensus        91 vm--Ey~~-g~L~~~l~----------------~~~~l~e~~~~~~~~qi~~al~ylH~~~  132 (275)
T 3hyh_A           91 VI--EYAG-NELFDYIV----------------QRDKMSEQEARRFFQQIISAVEYCHRHK  132 (275)
T ss_dssp             EE--ECCC-EEHHHHHH----------------HSCSCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             EE--eCCC-CCHHHHHH----------------HcCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            88  5553 45554331                2235899999999999999999999864

>3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus}

Probab=99.84  E-value=3.8e-21  Score=137.94  Aligned_cols=116  Identities=23%  Similarity=0.288  Sum_probs=92.5

Q ss_pred             eeecceecccCCeeEEEEE-EcCCCEEEEEEeecc--CccchhHHHHHHHHHhcccccCCCeeeeecceecC----CCcc
Q 039630           36 FRTSNKIGEGGFGSVYKGR-LEDGTVVAVNVLSVE--SKQGETEFMSEVASMANINICHENLVKLHGGCIDG----PSRI  108 (174)
Q Consensus        36 ~~~~~~lg~G~~g~V~~~~-~~~~~~~avK~~~~~--~~~~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~~~----~~~~  108 (174)
                      |+..+.||+|+||.||+|. ..++..||+|.+...  .......+.+|+.++++++  ||||+++++++...    +..+
T Consensus        28 ~~~~~~iG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~--HpnIV~~~~~~~~~~~~~~~~~  105 (290)
T 3fpq_A           28 LKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQ--HPNIVRFYDSWESTVKGKKCIV  105 (290)
T ss_dssp             EEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHTCC--CTTBCCEEEEEEEEETTEEEEE
T ss_pred             EEeeeEEecCcCcEEEEEEECCCCeEEEEEEEchhhCCHHHHHHHHHHHHHHHhCC--CCCCCcEEEEEeeccCCCcEEE
Confidence            4677889999999999999 567889999999754  2334567999999999999  99999999998652    3356


Q ss_pred             cchhhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhccC
Q 039630          109 LAPLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEIK  171 (174)
Q Consensus       109 lv~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~~  171 (174)
                      +|+  |+++++.|...+.                +...+++..+..++.||+.||+|||++.+
T Consensus       106 lvm--Ey~~gg~L~~~l~----------------~~~~l~~~~~~~~~~qi~~aL~ylH~~~~  150 (290)
T 3fpq_A          106 LVT--ELMTSGTLKTYLK----------------RFKVMKIKVLRSWCRQILKGLQFLHTRTP  150 (290)
T ss_dssp             EEE--ECCCSCBHHHHHH----------------HHSSCCHHHHHHHHHHHHHHHHHHHTSSS
T ss_pred             EEE--eCCCCCCHHHHHH----------------hcCCCCHHHHHHHHHHHHHHHHHHHHCCC
Confidence            666  7777777665431                22357899999999999999999998764

>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A*

Probab=99.83  E-value=9.8e-21  Score=138.16  Aligned_cols=113  Identities=19%  Similarity=0.189  Sum_probs=95.1

Q ss_pred             cCCeeecceecccCCeeEEEEE-EcCCCEEEEEEeeccCccchhHHHHHHHHHhcccccCCCeeeeecceecCCCcccch
Q 039630           33 TNGFRTSNKIGEGGFGSVYKGR-LEDGTVVAVNVLSVESKQGETEFMSEVASMANINICHENLVKLHGGCIDGPSRILAP  111 (174)
Q Consensus        33 ~~~~~~~~~lg~G~~g~V~~~~-~~~~~~~avK~~~~~~~~~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~~~~~~~lv~  111 (174)
                      .+.|...++||+|+||.||+|. ..+|+.||+|+++....     ..+|+.+++.++  ||||+++++++.+.+..++|+
T Consensus        57 ~~~~~~~~~lG~G~fG~Vy~a~~~~~g~~vAiK~i~~~~~-----~~~E~~il~~l~--HpnIV~l~~~~~~~~~~~ivm  129 (336)
T 4g3f_A           57 VHWMTHQPRVGRGSFGEVHRMKDKQTGFQCAVKKVRLEVF-----RVEELVACAGLS--SPRIVPLYGAVREGPWVNIFM  129 (336)
T ss_dssp             TTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTC-----CTHHHHTTTTCC--CTTBCCEEEEEEETTEEEEEE
T ss_pred             hhheEeCcEeccCCCeEEEEEEECCCCCEEEEEEECHHHh-----HHHHHHHHHhCC--CCCCCcEEEEEEECCEEEEEE
Confidence            3468888999999999999999 56799999999975422     246999999999  999999999999999888888


Q ss_pred             hhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhcc
Q 039630          112 LQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEI  170 (174)
Q Consensus       112 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  170 (174)
                        |+++++.|...+.                ....+++..+..++.||+.||+|||++.
T Consensus       130 --Ey~~gg~L~~~l~----------------~~~~l~e~~~~~~~~qi~~aL~ylH~~~  170 (336)
T 4g3f_A          130 --ELLEGGSLGQLIK----------------QMGCLPEDRALYYLGQALEGLEYLHTRR  170 (336)
T ss_dssp             --CCCTTCBHHHHHH----------------HHSSCCHHHHHHHHHHHHHHHHHHHTTT
T ss_pred             --eccCCCcHHHHHH----------------HcCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence              8888888776441                2235899999999999999999999853

>3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A*

Probab=99.82  E-value=4.2e-21  Score=138.46  Aligned_cols=117  Identities=22%  Similarity=0.234  Sum_probs=92.0

Q ss_pred             CCeeecceecccCCeeEEEEEE----cCCCEEEEEEeeccC--ccchhHHHHHHHHHhcccccCCCeeeeecceecCCCc
Q 039630           34 NGFRTSNKIGEGGFGSVYKGRL----EDGTVVAVNVLSVES--KQGETEFMSEVASMANINICHENLVKLHGGCIDGPSR  107 (174)
Q Consensus        34 ~~~~~~~~lg~G~~g~V~~~~~----~~~~~~avK~~~~~~--~~~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~~~~~~  107 (174)
                      ++|++++.||+|+||.||+|..    .+++.||+|+++...  ......+.+|+.++++++  ||||+++++++.+.+..
T Consensus        24 ~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~--HpnIv~l~~~~~~~~~~  101 (304)
T 3ubd_A           24 SQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVN--HPFIVKLHYAFQTEGKL  101 (304)
T ss_dssp             GGEEEEEEEECGGGCEEEEEEECSSTTTTCEEEEEEEESEEEEEEECC------CCCCCCC--CTTEECEEEEEEETTEE
T ss_pred             cccEEEEEEecCCCeEEEEEEEccCCCCCEEEEEEEEehHHcChHHHHHHHHHHHHHHHCC--CCCCCeEEEEEEECCEE
Confidence            5699999999999999999983    247799999997552  233446888999999999  99999999999999998


Q ss_pred             ccchhhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhcc
Q 039630          108 ILAPLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEI  170 (174)
Q Consensus       108 ~lv~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  170 (174)
                      ++|+  |+++++.|...+.                +...+++..+..++.|++.||+|||++.
T Consensus       102 ~ivm--Ey~~gg~L~~~l~----------------~~~~l~e~~~~~~~~qi~~aL~ylH~~~  146 (304)
T 3ubd_A          102 YLIL--DFLRGGDLFTRLS----------------KEVMFTEEDVKFYLAELALALDHLHSLG  146 (304)
T ss_dssp             EEEE--CCCTTCEEHHHHH----------------HHCCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             EEEE--EcCCCCCHHHHHH----------------hcCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            8888  7777777766442                2235899999999999999999999864

>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A*

Probab=99.82  E-value=2e-20  Score=134.94  Aligned_cols=120  Identities=18%  Similarity=0.264  Sum_probs=87.7

Q ss_pred             CCeeecceecccCCeeEEEEE-EcCCCEEEEEEeeccCc-cchhHHHHHHHHHhcccccCCCeeeeecceecCCC-----
Q 039630           34 NGFRTSNKIGEGGFGSVYKGR-LEDGTVVAVNVLSVESK-QGETEFMSEVASMANINICHENLVKLHGGCIDGPS-----  106 (174)
Q Consensus        34 ~~~~~~~~lg~G~~g~V~~~~-~~~~~~~avK~~~~~~~-~~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~~~~~-----  106 (174)
                      ++|++++.||+|+||.||+|. ..+|+.||+|+++.... ...+.+.+|+.+|+.++  ||||+++++++...+.     
T Consensus         5 ~dy~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~E~~il~~l~--HpnIV~~~~~~~~~~~~~~~~   82 (299)
T 4g31_A            5 TDFEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLE--HPGIVRYFNAWLEKNTTEKLQ   82 (299)
T ss_dssp             HHEEEEEEEEECC--EEEEEEETTTCCEEEEEEEEECSSHHHHHHHHHHHHHHTTCC--CTTBCCEEEEEEEEC------
T ss_pred             hhCEEeeEEecCCCeEEEEEEECCCCCEEEEEEEeccCCHHHHHHHHHHHHHHHhCC--CCCCCeEEEEEEecCcccccc
Confidence            358999999999999999999 56799999999976532 34567899999999999  9999999999876543     


Q ss_pred             -------cccchhhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhcc
Q 039630          107 -------RILAPLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEI  170 (174)
Q Consensus       107 -------~~lv~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  170 (174)
                             .++++  ++++++.|...+...             ......++..++.++.||+.||+|||++.
T Consensus        83 ~~~~~~~l~ivm--E~~~gg~L~~~l~~~-------------~~~~~~~~~~~~~i~~qi~~al~ylH~~~  138 (299)
T 4g31_A           83 PSSPKVYLYIQM--QLCRKENLKDWMNGR-------------CTIEERERSVCLHIFLQIAEAVEFLHSKG  138 (299)
T ss_dssp             ----CEEEEEEE--ECCCSCCHHHHHHTC-------------CSGGGSCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             ccCCCcEEEEEE--ecCCCCcHHHHHHhc-------------CCCChhHHHHHHHHHHHHHHHHHHHHHCc
Confidence                   34444  555555554433111             11123456678889999999999999864

>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A

Probab=99.82  E-value=3.9e-20  Score=144.05  Aligned_cols=118  Identities=20%  Similarity=0.303  Sum_probs=101.1

Q ss_pred             CCeeecceecccCCeeEEEEE-EcCCCEEEEEEeeccCccchhHHHHHHHHHhcccccCCCeeeeecceecCCCcccchh
Q 039630           34 NGFRTSNKIGEGGFGSVYKGR-LEDGTVVAVNVLSVESKQGETEFMSEVASMANINICHENLVKLHGGCIDGPSRILAPL  112 (174)
Q Consensus        34 ~~~~~~~~lg~G~~g~V~~~~-~~~~~~~avK~~~~~~~~~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~~~~~~~lv~~  112 (174)
                      ++|.+++.||+|+||.||+|. ..+|+.||+|++..........+.+|+.+|+.++  ||||+++++++.+.+..++++ 
T Consensus       157 ~~Y~i~~~lG~G~fg~V~~~~~~~tg~~~AiK~i~~~~~~~~~~~~~Ei~il~~l~--hpnIv~l~~~~~~~~~~~iv~-  233 (573)
T 3uto_A          157 DHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLR--HPTLVNLHDAFEDDNEMVMIY-  233 (573)
T ss_dssp             GTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHHHTC--CTTBCCEEEEEECSSEEEEEE-
T ss_pred             cccEEEEEEeeccCeEEEEEEECCCCCEEEEEEEeccchhhHHHHHHHHHHHHhCC--CCCCCeEEEEEEECCEEEEEE-
Confidence            579999999999999999999 5679999999998665555677899999999999  999999999999999988888 


Q ss_pred             hhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhcc
Q 039630          113 QASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEI  170 (174)
Q Consensus       113 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  170 (174)
                       ++++++.|...+.               .....+++..+..++.||+.||.|||++.
T Consensus       234 -E~~~gg~L~~~i~---------------~~~~~l~e~~~~~~~~qi~~al~ylH~~~  275 (573)
T 3uto_A          234 -EFMSGGELFEKVA---------------DEHNKMSEDEAVEYMRQVCKGLCHMHENN  275 (573)
T ss_dssp             -ECCCCCBHHHHHT---------------CTTSCEEHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             -eecCCCcHHHHHH---------------HhCCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence             7777777766441               22345889999999999999999999863

>4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens}

Probab=99.81  E-value=8.8e-20  Score=136.30  Aligned_cols=116  Identities=18%  Similarity=0.275  Sum_probs=92.0

Q ss_pred             CCeeecceecccCCeeEEEEE-EcCCCEEEEEEeeccC--ccchhHHHHHHHHHhcccccCCCeeeeecceecC------
Q 039630           34 NGFRTSNKIGEGGFGSVYKGR-LEDGTVVAVNVLSVES--KQGETEFMSEVASMANINICHENLVKLHGGCIDG------  104 (174)
Q Consensus        34 ~~~~~~~~lg~G~~g~V~~~~-~~~~~~~avK~~~~~~--~~~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~~~------  104 (174)
                      ++|++++.||+|+||.||+|. ..+|+.||||+++...  ......+.+|+.+|+.++  ||||+++++++...      
T Consensus        54 ~~Y~~~~~lG~G~fG~V~~a~~~~t~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~--HpnIv~l~~~~~~~~~~~~~  131 (398)
T 4b99_A           54 DEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFK--HDNIIAIKDILRPTVPYGEF  131 (398)
T ss_dssp             SSEEEEEEEEECSSCEEEEEEETTTCCEEEEEEETTTTSSHHHHHHHHHHHHHHHHCC--CTTBCCEEEECCCSSCTTTC
T ss_pred             CCeEEEEEEecccCeEEEEEEECCCCCEEEEEEECccccchHHHHHHHHHHHHHHhcC--CCCcceEeeeeecccccccC
Confidence            569999999999999999999 5679999999997542  233556889999999999  99999999987643      


Q ss_pred             CCcccchhhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhcc
Q 039630          105 PSRILAPLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEI  170 (174)
Q Consensus       105 ~~~~lv~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  170 (174)
                      +..++|+  ++++ +.+...+                .....+++..+..++.||+.||+|||++.
T Consensus       132 ~~~~ivm--E~~~-g~L~~~i----------------~~~~~l~~~~~~~~~~qil~al~ylH~~~  178 (398)
T 4b99_A          132 KSVYVVL--DLME-SDLHQII----------------HSSQPLTLEHVRYFLYQLLRGLKYMHSAQ  178 (398)
T ss_dssp             CCEEEEE--ECCS-EEHHHHH----------------TSSSCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             CEEEEEE--eCCC-CCHHHHH----------------HhcCCCCHHHHHHHHHHHHHHHHHHHHCc
Confidence            4556777  5554 3343322                22346899999999999999999999864

>3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*

Probab=99.80  E-value=8.7e-20  Score=131.95  Aligned_cols=112  Identities=28%  Similarity=0.371  Sum_probs=87.2

Q ss_pred             cCCeeecceecccCCeeEEEEEEcCCCEEEEEEeeccCccchhHHHH--HHHHHhcccccCCCeeeeecceecCC----C
Q 039630           33 TNGFRTSNKIGEGGFGSVYKGRLEDGTVVAVNVLSVESKQGETEFMS--EVASMANINICHENLVKLHGGCIDGP----S  106 (174)
Q Consensus        33 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~avK~~~~~~~~~~~~~~~--e~~~l~~l~~~h~~i~~~~~~~~~~~----~  106 (174)
                      +++|.+.+.||+|+||.||+|.+ +|+.||||+++..   ....+..  |+..+..++  ||||+++++++...+    .
T Consensus         2 ar~i~L~~~iG~G~fG~Vy~~~~-~g~~VAvK~l~~~---~~~~~~~e~Ei~~~~~l~--HpNIv~l~g~~~~~~~~~~~   75 (303)
T 3hmm_A            2 ARTIVLQESIGKGRFGEVWRGKW-RGEEVAVKIFSSR---EERSWFREAEIYQTVMLR--HENILGFIAADNKDNGTWTQ   75 (303)
T ss_dssp             GGGEEEEEEEEECSSSEEEEEEE-TTEEEEEEEECGG---GHHHHHHHHHHHTSTTCC--CTTBCCEEEEEEEECSSSEE
T ss_pred             CcEEEEEEEEeeCCCeEEEEEEE-CCEEEEEEEECcc---chhhHHHHHHHHHHhcCC--CCCCCcEEEEEEecCCCceE
Confidence            35688899999999999999987 4889999999743   2233344  444556677  999999999998764    3


Q ss_pred             cccchhhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhc
Q 039630          107 RILAPLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEE  169 (174)
Q Consensus       107 ~~lv~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~  169 (174)
                      .++|+  |+++++.|...+.                 ...+++..+..++.|++.||+|||++
T Consensus        76 ~~lV~--Ey~~~gsL~~~l~-----------------~~~l~~~~~~~i~~~ia~gl~ylH~~  119 (303)
T 3hmm_A           76 LWLVS--DYHEHGSLFDYLN-----------------RYTVTVEGMIKLALSTASGLAHLHME  119 (303)
T ss_dssp             EEEEE--ECCTTCBHHHHHH-----------------HCCBCHHHHHHHHHHHHHHHHHHHCC
T ss_pred             EEEEe--cCCCCCcHHHHHH-----------------hCCCCHHHHHHHHHHHHHHHHHHHHh
Confidence            56777  7778777776441                 12478899999999999999999986

>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A*

Probab=99.78  E-value=6.3e-19  Score=128.35  Aligned_cols=137  Identities=38%  Similarity=0.645  Sum_probs=110.7

Q ss_pred             CcccceechhhHHhhcCCeeecceecccCCeeEEEEEEcCCCEEEEEEeeccC-ccchhHHHHHHHHHhcccccCCCeee
Q 039630           18 GYKFSKISYNELKIATNGFRTSNKIGEGGFGSVYKGRLEDGTVVAVNVLSVES-KQGETEFMSEVASMANINICHENLVK   96 (174)
Q Consensus        18 ~~~~~~~~~~~~~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~avK~~~~~~-~~~~~~~~~e~~~l~~l~~~h~~i~~   96 (174)
                      ...+..++..++....++|...+.||+|+||.||++...++..||+|+++... ......+.+|+.++..++  |+||++
T Consensus        14 ~~~~~~~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~--h~~iv~   91 (326)
T 3uim_A           14 LGQLKRFSLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERTQGGELQFQTEVEMISMAV--HRNLLR   91 (326)
T ss_dssp             -CCCEECCTHHHHTTTTSSCSTTEEECCSSSEEEEECCSSSCCEEEEECCC-----CCCHHHHHHHGGGTCC--CTTBCC
T ss_pred             cCccceecHHHHHHHhhccccceeEecCCCcEEEEEEecCCCEEEEEEeccccCchHHHHHHHHHHHHHhcc--CCCccc
Confidence            34566788999999999999999999999999999997779999999997553 233446899999999999  999999


Q ss_pred             eecceecCCCcccchhhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhcc
Q 039630           97 LHGGCIDGPSRILAPLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEI  170 (174)
Q Consensus        97 ~~~~~~~~~~~~lv~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  170 (174)
                      +++++...+..++++  ++.+++.+...+..            .......+++..+..++.|++.||+|||++.
T Consensus        92 ~~~~~~~~~~~~lv~--e~~~~~~L~~~l~~------------~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~  151 (326)
T 3uim_A           92 LRGFCMTPTERLLVY--PYMANGSVASCLRE------------RPESQPPLDWPKRQRIALGSARGLAYLHDHC  151 (326)
T ss_dssp             CCEEECCSSCCEEEE--ECCTTCBHHHHHHC------------CSTTCCCCCHHHHHHHHHHHHHHHHHHHHSS
T ss_pred             eEEEEecCCceEEEE--EeccCCCHHHHHHh------------ccccCCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            999999988888888  77777666653321            1122335889999999999999999999974

>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A*

Probab=99.77  E-value=1.4e-18  Score=126.29  Aligned_cols=131  Identities=37%  Similarity=0.551  Sum_probs=105.6

Q ss_pred             eechhhHHhhcCCeeecceecccCCeeEEEEEEcCCCEEEEEEeeccCccchhHHHHHHHHHhcccccCCCeeeeeccee
Q 039630           23 KISYNELKIATNGFRTSNKIGEGGFGSVYKGRLEDGTVVAVNVLSVESKQGETEFMSEVASMANINICHENLVKLHGGCI  102 (174)
Q Consensus        23 ~~~~~~~~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~avK~~~~~~~~~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~  102 (174)
                      .++..++....++|...+.||+|+||.||+|...++..||+|.+..........+.+|+.+++.++  ||||+++++.+.
T Consensus        28 ~~~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~--h~~iv~~~~~~~  105 (321)
T 2qkw_B           28 RVPLVDLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIETLSFCR--HPHLVSLIGFCD  105 (321)
T ss_dssp             --CCSCCCCCCCCCSCCCCSCBCSSSEEEEEECTTCCEEEEEECCSCCSSHHHHHHHHHHGGGSCC--CTTBCCEEEECC
T ss_pred             eecHHHHHHHHhccCccceeecCCCeeEEEEEECCCCEEEEEEecccChHHHHHHHHHHHHHHhCC--CCCEeeEEEEEc
Confidence            455556666778999999999999999999998789999999987665556678999999999999  999999999999


Q ss_pred             cCCCcccchhhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhc
Q 039630          103 DGPSRILAPLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEE  169 (174)
Q Consensus       103 ~~~~~~lv~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~  169 (174)
                      ..+..++++  ++.+++.+...+..            .......+++..++.++.|++.||.|||++
T Consensus       106 ~~~~~~lv~--e~~~~~~L~~~l~~------------~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~  158 (321)
T 2qkw_B          106 ERNEMILIY--KYMENGNLKRHLYG------------SDLPTMSMSWEQRLEICIGAARGLHYLHTR  158 (321)
T ss_dssp             CTTCCEEEE--ECCTTCBTGGGSSS------------SCCCSCCCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             CCCeEEEEE--EcCCCCcHHHHHhc------------cCCCccccCHHHHHHHHHHHHHHHHHhcCC
Confidence            888888888  77766666553211            111223578999999999999999999985

>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A

Probab=99.75  E-value=1.8e-18  Score=135.56  Aligned_cols=117  Identities=26%  Similarity=0.287  Sum_probs=94.5

Q ss_pred             CCeeecceecccCCeeEEEEE-EcCCCEEEEEEeeccC---ccchhHHHHH---HHHHhcccccCCCeeeeecceecCCC
Q 039630           34 NGFRTSNKIGEGGFGSVYKGR-LEDGTVVAVNVLSVES---KQGETEFMSE---VASMANINICHENLVKLHGGCIDGPS  106 (174)
Q Consensus        34 ~~~~~~~~lg~G~~g~V~~~~-~~~~~~~avK~~~~~~---~~~~~~~~~e---~~~l~~l~~~h~~i~~~~~~~~~~~~  106 (174)
                      ++|.++++||+|+||.||+|. ..+|+.||+|+++...   .........|   +.+++.++  ||||+++++++.+.+.
T Consensus       189 ddf~i~k~LG~G~fG~V~la~~~~tg~~~AiK~i~K~~i~~~~~~~~~~~E~~~l~ll~~~~--HP~IV~l~~~f~~~~~  266 (689)
T 3v5w_A          189 NDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGD--CPFIVCMSYAFHTPDK  266 (689)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHSSSC--CTTBCCEEEEEECSSE
T ss_pred             HHeEEEEEEecccCeEEEEEEECCCCCEEEEEEEeHHHcchhhhHHHHHHHHHHHHHHhhCC--CCCEeEEEEEEEECCE
Confidence            579999999999999999999 5679999999997541   2223333444   55666777  9999999999999999


Q ss_pred             cccchhhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhcc
Q 039630          107 RILAPLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEI  170 (174)
Q Consensus       107 ~~lv~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  170 (174)
                      .++|+  +++.++.|...+.                ....+++..+..++.||+.||+|||++.
T Consensus       267 lylVm--Ey~~GGdL~~~l~----------------~~~~l~E~~a~~y~~qIl~aL~yLH~~g  312 (689)
T 3v5w_A          267 LSFIL--DLMNGGDLHYHLS----------------QHGVFSEADMRFYAAEIILGLEHMHNRF  312 (689)
T ss_dssp             EEEEE--CCCCSCBHHHHHH----------------HHCCCCHHHHHHHHHHHHHHHHHHHTTT
T ss_pred             EEEEE--ecCCCCcHHHHHH----------------hcCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            99998  8888888876542                2235899999999999999999999863

>4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A*

Probab=99.74  E-value=1.1e-17  Score=123.51  Aligned_cols=116  Identities=21%  Similarity=0.257  Sum_probs=94.1

Q ss_pred             hhcCCeeecceecccCCeeEEEEEE----cCCCEEEEEEeeccCccchhHHHHHHHHHhcccccCCCeeeeecceecCCC
Q 039630           31 IATNGFRTSNKIGEGGFGSVYKGRL----EDGTVVAVNVLSVESKQGETEFMSEVASMANINICHENLVKLHGGCIDGPS  106 (174)
Q Consensus        31 ~~~~~~~~~~~lg~G~~g~V~~~~~----~~~~~~avK~~~~~~~~~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~~~~~  106 (174)
                      ...+.|++.+.||+|+||.||+|..    .+++.||+|.+...  .....+.+|+.++..+. .||||+++++++...+.
T Consensus        18 ~l~~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~--~~~~~~~~E~~~l~~~~-~h~nIv~l~~~~~~~~~   94 (361)
T 4f9c_A           18 QLSNVFKIEDKIGEGTFSSVYLATAQLQVGPEEKIALKHLIPT--SHPIRIAAELQCLTVAG-GQDNVMGVKYCFRKNDH   94 (361)
T ss_dssp             GGGGTCEEEEEEEECSSEEEEEEEEEBTTSCEEEEEEEEECTT--SCHHHHHHHHHHHHHTC-SBTTBCCCSEEEEETTE
T ss_pred             CccCcEEEEEEEecccCcEEEEEEEcccCCCCCEEEEEEEccc--cCHHHHHHHHHHHHHhc-CCCCCceEEEEEEECCE
Confidence            3456799999999999999999983    24678999998644  23456789999999873 39999999999999998


Q ss_pred             cccchhhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhcc
Q 039630          107 RILAPLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEI  170 (174)
Q Consensus       107 ~~lv~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  170 (174)
                      .++|+  ++.+++.+...+                   ..+++..+..++.|++.||+|||++.
T Consensus        95 ~~lvm--E~~~g~~L~~~~-------------------~~l~~~~~~~~~~qll~al~ylH~~g  137 (361)
T 4f9c_A           95 VVIAM--PYLEHESFLDIL-------------------NSLSFQEVREYMLNLFKALKRIHQFG  137 (361)
T ss_dssp             EEEEE--ECCCCCCHHHHH-------------------TTCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             EEEEE--eCCCcccHHHHH-------------------cCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            88888  777766665522                   13788899999999999999999853

>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A*

Probab=99.73  E-value=2.9e-18  Score=127.44  Aligned_cols=127  Identities=21%  Similarity=0.358  Sum_probs=103.0

Q ss_pred             chhhHHhhcCCeeecceecccCCeeEEEEEEc-CCCEEEEEEeeccC-ccchhHHHHHHHHHhcccccCCCeeeeeccee
Q 039630           25 SYNELKIATNGFRTSNKIGEGGFGSVYKGRLE-DGTVVAVNVLSVES-KQGETEFMSEVASMANINICHENLVKLHGGCI  102 (174)
Q Consensus        25 ~~~~~~~~~~~~~~~~~lg~G~~g~V~~~~~~-~~~~~avK~~~~~~-~~~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~  102 (174)
                      ..+.|....++|.+.+.||+|+||.||+|... ++..||+|.++... ......+.+|+.+++.++  ||||+++++++.
T Consensus       105 ~~~~~~~~~~~~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~--hpniv~~~~~~~  182 (377)
T 3cbl_A          105 PKDKWVLNHEDLVLGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYS--HPNIVRLIGVCT  182 (377)
T ss_dssp             CCCTTBCCGGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEECCTTSCHHHHTTTTHHHHHHTTCC--CTTBCCEEEEEC
T ss_pred             cccccEEchHHeEEeeEeccCCCCeEEEEEEecCCeEEEEEEccccCCHHHHHHHHHHHHHHHhCC--CCCEEEEEEEEe
Confidence            34566677788999999999999999999954 78999999997542 233457889999999999  999999999999


Q ss_pred             cCCCcccchhhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhcc
Q 039630          103 DGPSRILAPLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEI  170 (174)
Q Consensus       103 ~~~~~~lv~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  170 (174)
                      ..+..++++  ++.+++.+...+..               ....+++..+..++.|++.||+|||++.
T Consensus       183 ~~~~~~lv~--e~~~~g~L~~~l~~---------------~~~~~~~~~~~~~~~qi~~~l~~LH~~~  233 (377)
T 3cbl_A          183 QKQPIYIVM--ELVQGGDFLTFLRT---------------EGARLRVKTLLQMVGDAAAGMEYLESKC  233 (377)
T ss_dssp             SSSSCEEEE--ECCTTCBHHHHHHH---------------HGGGCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             cCCCcEEEE--EcCCCCCHHHHHHh---------------cCCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            888888888  77777766654311               1224788999999999999999999863

>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens}

Probab=99.73  E-value=1.4e-17  Score=120.44  Aligned_cols=119  Identities=24%  Similarity=0.334  Sum_probs=99.0

Q ss_pred             cCCeeecceecccCCeeEEEEE-EcCCCEEEEEEeeccCccchhHHHHHHHHHhcccccCCCeeeeecceecCCCcccch
Q 039630           33 TNGFRTSNKIGEGGFGSVYKGR-LEDGTVVAVNVLSVESKQGETEFMSEVASMANINICHENLVKLHGGCIDGPSRILAP  111 (174)
Q Consensus        33 ~~~~~~~~~lg~G~~g~V~~~~-~~~~~~~avK~~~~~~~~~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~~~~~~~lv~  111 (174)
                      .++|...+.||+|+||.||++. ..++..+|+|.+..........+.+|+.++..++  ||||+++++++...+..++++
T Consensus         9 ~~~~~~~~~lG~G~~g~V~~~~~~~~~~~va~K~~~~~~~~~~~~~~~E~~~l~~l~--hp~iv~~~~~~~~~~~~~lv~   86 (310)
T 3s95_A            9 PSDLIHGEVLGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLE--HPNVLKFIGVLYKDKRLNFIT   86 (310)
T ss_dssp             GGGEEEEEEEECCSSEEEEEEEETTTCCEEEEEEESCCCHHHHHHHHHHHHHHTTCC--CTTBCCEEEEEEETTEEEEEE
T ss_pred             hhHeeccceecCCCCEEEEEEEECCCCcEEEEEEeccCCHHHHHHHHHHHHHHHhCC--CcCcccEEEEEecCCeeEEEE
Confidence            3578999999999999999999 4568999999987555566778999999999999  999999999999988888888


Q ss_pred             hhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhcc
Q 039630          112 LQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEI  170 (174)
Q Consensus       112 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  170 (174)
                        ++.+++.+...+..               ....+++..+..++.|++.||+|||++.
T Consensus        87 --e~~~~~~L~~~l~~---------------~~~~~~~~~~~~i~~qi~~al~~lH~~~  128 (310)
T 3s95_A           87 --EYIKGGTLRGIIKS---------------MDSQYPWSQRVSFAKDIASGMAYLHSMN  128 (310)
T ss_dssp             --ECCTTCBHHHHHHH---------------CCTTSCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             --EecCCCcHHHHHHh---------------ccCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence              77777666653311               1234789999999999999999999863

>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A*

Probab=99.72  E-value=1.6e-17  Score=120.35  Aligned_cols=129  Identities=26%  Similarity=0.440  Sum_probs=100.8

Q ss_pred             echhhHHhhcCCeeecceecccCCeeEEEEEEcCCCEEEEEEeeccC--ccchhHHHHHHHHHhcccccCCCeeeeecce
Q 039630           24 ISYNELKIATNGFRTSNKIGEGGFGSVYKGRLEDGTVVAVNVLSVES--KQGETEFMSEVASMANINICHENLVKLHGGC  101 (174)
Q Consensus        24 ~~~~~~~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~avK~~~~~~--~~~~~~~~~e~~~l~~l~~~h~~i~~~~~~~  101 (174)
                      .....+.....+|++.+.||+|+||.||++.. ++..+|+|++....  ......+.+|+.++++++  |+||+++++.+
T Consensus        27 ~~~~~~~i~~~~y~i~~~lG~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~--hp~iv~~~~~~  103 (309)
T 3p86_A           27 MDGDDMDIPWCDLNIKEKIGAGSFGTVHRAEW-HGSDVAVKILMEQDFHAERVNEFLREVAIMKRLR--HPNIVLFMGAV  103 (309)
T ss_dssp             -----CBCCGGGEEEEEEEEECSSEEEEEEEE-TTEEEEEEEECCCCCSHHHHHHHHHHHHHHHHCC--CTTBCCEEEEE
T ss_pred             CCcccccCChhHceeeeEeecCCCeEEEEEEE-CCCcEEEEEecCCCCCHHHHHHHHHHHHHHHhCC--CCCEeeEEEEE
Confidence            44455666677899999999999999999976 48889999997553  233457889999999999  99999999999


Q ss_pred             ecCCCcccchhhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhcc
Q 039630          102 IDGPSRILAPLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEI  170 (174)
Q Consensus       102 ~~~~~~~lv~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  170 (174)
                      ...+..++++  ++.+++.+...+...             .....+++..++.++.|++.||+|||++.
T Consensus       104 ~~~~~~~lv~--e~~~~~~L~~~l~~~-------------~~~~~~~~~~~~~i~~qi~~aL~~LH~~~  157 (309)
T 3p86_A          104 TQPPNLSIVT--EYLSRGSLYRLLHKS-------------GAREQLDERRRLSMAYDVAKGMNYLHNRN  157 (309)
T ss_dssp             CSTTCCEEEE--ECCTTCBHHHHHHST-------------THHHHSCHHHHHHHHHHHHHHHHHHHTSS
T ss_pred             EECCceEEEE--ecCCCCcHHHHHhhc-------------CCCCCCCHHHHHHHHHHHHHHHHHHHcCC
Confidence            9988888888  777776666533211             11224788999999999999999999976

>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A

Probab=99.72  E-value=1.7e-17  Score=121.21  Aligned_cols=118  Identities=22%  Similarity=0.267  Sum_probs=98.2

Q ss_pred             cCCeeecceecccCCeeEEEEE-EcCCCEEEEEEeecc--CccchhHHHHHHHHHhcccccCCCeeeeecceecCCCccc
Q 039630           33 TNGFRTSNKIGEGGFGSVYKGR-LEDGTVVAVNVLSVE--SKQGETEFMSEVASMANINICHENLVKLHGGCIDGPSRIL  109 (174)
Q Consensus        33 ~~~~~~~~~lg~G~~g~V~~~~-~~~~~~~avK~~~~~--~~~~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~~~~~~~l  109 (174)
                      .++|++.+.||+|+||.||+|. ..+|+.||+|++...  .......+.+|+.+++.++  ||||+++++++...+..++
T Consensus        14 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~--hpnIv~l~~~~~~~~~~~l   91 (328)
T 3fe3_A           14 IGNYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILN--HPNIVKLFEVIETEKTLYL   91 (328)
T ss_dssp             ETTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCC--CTTBCCEEEEEECSSEEEE
T ss_pred             cCCEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhhcCCHHHHHHHHHHHHHHHhCC--CCCEeeEEEEEEECCEEEE
Confidence            4679999999999999999999 467999999999755  2334566889999999999  9999999999999988888


Q ss_pred             chhhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhcc
Q 039630          110 APLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEI  170 (174)
Q Consensus       110 v~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  170 (174)
                      |+  ++.+++.+...+.                ....+++..+..++.|++.||+|||++.
T Consensus        92 v~--e~~~~~~L~~~l~----------------~~~~l~~~~~~~~~~qi~~al~~lH~~~  134 (328)
T 3fe3_A           92 IM--EYASGGEVFDYLV----------------AHGRMKEKEARSKFRQIVSAVQYCHQKR  134 (328)
T ss_dssp             EE--CCCTTCBHHHHHH----------------HHCCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             EE--ECCCCCcHHHHHH----------------HcCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            88  7777766665432                1234788999999999999999999864

>4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*

Probab=99.72  E-value=3.1e-17  Score=116.37  Aligned_cols=122  Identities=25%  Similarity=0.356  Sum_probs=100.1

Q ss_pred             HHhhcCCeeecceecccCCeeEEEEEEcCCCEEEEEEeeccCccchhHHHHHHHHHhcccccCCCeeeeecceecCCCcc
Q 039630           29 LKIATNGFRTSNKIGEGGFGSVYKGRLEDGTVVAVNVLSVESKQGETEFMSEVASMANINICHENLVKLHGGCIDGPSRI  108 (174)
Q Consensus        29 ~~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~avK~~~~~~~~~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~~~~~~~  108 (174)
                      |....++|++.+.||+|+||.||++...++..+|+|++... ....+.+.+|+.++++++  ||||+++++++...+..+
T Consensus         5 ~~i~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~-~~~~~~~~~E~~~l~~l~--h~~i~~~~~~~~~~~~~~   81 (269)
T 4hcu_A            5 WVIDPSELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREG-AMSEEDFIEEAEVMMKLS--HPKLVQLYGVCLEQAPIC   81 (269)
T ss_dssp             CBCCGGGEEEEEEEEECSSCEEEEEEETTTEEEEEEEECTT-SBCHHHHHHHHHHHHTCC--CTTBCCEEEEECSSSSEE
T ss_pred             EEeChhhceeeheecCCCccEEEEEEecCCCeEEEEEeccc-ccCHHHHHHHHHHHHhCC--CCCEeeEEEEEecCCceE
Confidence            44555789999999999999999999877889999999754 334567899999999999  999999999999988888


Q ss_pred             cchhhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhcc
Q 039630          109 LAPLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEI  170 (174)
Q Consensus       109 lv~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  170 (174)
                      +++  ++.+++.+...+.               .....+++..+..++.|++.||.|||++.
T Consensus        82 lv~--e~~~~~~L~~~l~---------------~~~~~~~~~~~~~i~~~i~~~l~~lH~~~  126 (269)
T 4hcu_A           82 LVF--EFMEHGCLSDYLR---------------TQRGLFAAETLLGMCLDVCEGMAYLEEAC  126 (269)
T ss_dssp             EEE--ECCTTCBHHHHHH---------------TTTTCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             EEE--EeCCCCcHHHHHH---------------hcCcccCHHHHHHHHHHHHHHHHHHHhCC
Confidence            888  7776666655331               12234788999999999999999999864

>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A*

Probab=99.72  E-value=3.3e-17  Score=118.76  Aligned_cols=117  Identities=21%  Similarity=0.304  Sum_probs=92.8

Q ss_pred             CCeeecceecccCCeeEEEEEEcCCCEEEEEEeeccC--ccchhHHHHHHHHHhcccccCCCeeeeecceecCCCcccch
Q 039630           34 NGFRTSNKIGEGGFGSVYKGRLEDGTVVAVNVLSVES--KQGETEFMSEVASMANINICHENLVKLHGGCIDGPSRILAP  111 (174)
Q Consensus        34 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~avK~~~~~~--~~~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~~~~~~~lv~  111 (174)
                      ++|++.+.||+|+||.||++...+++.+|+|+++...  ......+.+|+.+++.++  ||||+++++++...+..++++
T Consensus        21 ~~y~~~~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~--hp~iv~~~~~~~~~~~~~lv~   98 (311)
T 3niz_A           21 EKYQKLEKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELH--HPNIVSLIDVIHSERCLTLVF   98 (311)
T ss_dssp             CEEEEEEEEEECSSCEEEEEEETTSCEEEEEEEC------CHHHHHHHHHHHHHHCC--CTTBCCEEEEECCSSCEEEEE
T ss_pred             hhhHhhhhccCCCCeEEEEEEECCCCEEEEEEEecccccchhhHHHHHHHHHHHHcC--CCCEeeeeeEEccCCEEEEEE
Confidence            5699999999999999999998779999999997542  223467889999999999  999999999999888888888


Q ss_pred             hhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhcc
Q 039630          112 LQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEI  170 (174)
Q Consensus       112 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  170 (174)
                        ++.++ .+...+.               .....+++..+..++.|++.||.|||++.
T Consensus        99 --e~~~~-~l~~~~~---------------~~~~~~~~~~~~~~~~qi~~~l~~LH~~~  139 (311)
T 3niz_A           99 --EFMEK-DLKKVLD---------------ENKTGLQDSQIKIYLYQLLRGVAHCHQHR  139 (311)
T ss_dssp             --ECCSE-EHHHHHH---------------TCTTCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             --cCCCC-CHHHHHH---------------hccCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence              55553 3333221               12234788999999999999999999753

>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens}

Probab=99.72  E-value=1.9e-17  Score=120.75  Aligned_cols=120  Identities=23%  Similarity=0.379  Sum_probs=96.5

Q ss_pred             hcCCeeecceecccCCeeEEEEEEc----CCCEEEEEEeecc-CccchhHHHHHHHHHhcccccCCCeeeeecceecCCC
Q 039630           32 ATNGFRTSNKIGEGGFGSVYKGRLE----DGTVVAVNVLSVE-SKQGETEFMSEVASMANINICHENLVKLHGGCIDGPS  106 (174)
Q Consensus        32 ~~~~~~~~~~lg~G~~g~V~~~~~~----~~~~~avK~~~~~-~~~~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~~~~~  106 (174)
                      ..++|.+.+.||+|+||.||+|...    .+..||+|+++.. .......+.+|+.++..++  |+||+++++++...+.
T Consensus        47 ~~~~y~i~~~lG~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~--h~~iv~~~~~~~~~~~  124 (325)
T 3kul_A           47 EASRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFD--HPNIIRLEGVVTRGRL  124 (325)
T ss_dssp             CGGGEEEEEEEEETTTEEEEEEEECCTTSCCEEEEEEEECTTCCHHHHHHHHHHHHHHTTCC--CTTBCCEEEEECGGGC
T ss_pred             ChhHeEEeeEEEeCCCcEEEEEEEecCCCCCceEEEEecCCCCCHHHHHHHHHHHHHHHhCC--CCCCCcEEEEEEeCCc
Confidence            3457999999999999999999952    3456999999755 3334567899999999999  9999999999988888


Q ss_pred             cccchhhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhcc
Q 039630          107 RILAPLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEI  170 (174)
Q Consensus       107 ~~lv~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  170 (174)
                      .++++  ++.+++.+...+.               .....+++..+..++.|++.||.|||++.
T Consensus       125 ~~lv~--e~~~~~~L~~~l~---------------~~~~~~~~~~~~~i~~qi~~~L~~LH~~~  171 (325)
T 3kul_A          125 AMIVT--EYMENGSLDTFLR---------------THDGQFTIMQLVGMLRGVGAGMRYLSDLG  171 (325)
T ss_dssp             CEEEE--ECCTTCBHHHHHH---------------TTTTCSCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             cEEEe--eCCCCCcHHHHHH---------------hcccCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            88888  7777766655331               12235789999999999999999999753

>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A

Probab=99.72  E-value=2.8e-17  Score=117.38  Aligned_cols=126  Identities=23%  Similarity=0.388  Sum_probs=100.1

Q ss_pred             chhhHHhhcCCeeecceecccCCeeEEEEEEcCCCEEEEEEeeccCccchhHHHHHHHHHhcccccCCCeeeeecceecC
Q 039630           25 SYNELKIATNGFRTSNKIGEGGFGSVYKGRLEDGTVVAVNVLSVESKQGETEFMSEVASMANINICHENLVKLHGGCIDG  104 (174)
Q Consensus        25 ~~~~~~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~avK~~~~~~~~~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~~~  104 (174)
                      ....|....++|++.+.||+|+||.||++...++..||+|+++.. ......+.+|+.++..++  |+||+++++++...
T Consensus        15 ~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~-~~~~~~~~~E~~~l~~l~--h~~i~~~~~~~~~~   91 (283)
T 3gen_A           15 GYGSWEIDPKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEG-SMSEDEFIEEAKVMMNLS--HEKLVQLYGVCTKQ   91 (283)
T ss_dssp             -CCTTBCCGGGEEEEEECC---CEEEEEEEETTTEEEEEEEECTT-SBCHHHHHHHHHHHHTCC--CTTBCCEEEEECSS
T ss_pred             CCCCccCCHHHHHhHhhcCCCCCceEEEEEEcCCCeEEEEEecCC-CCCHHHHHHHHHHHhcCC--CCCEeeEEEEEecC
Confidence            345666677889999999999999999999888889999999754 334567899999999999  99999999999988


Q ss_pred             CCcccchhhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhcc
Q 039630          105 PSRILAPLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEI  170 (174)
Q Consensus       105 ~~~~lv~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  170 (174)
                      +..++++  ++.+++.+...+.               .....+++..+..++.|++.||.|||++.
T Consensus        92 ~~~~lv~--e~~~~~~L~~~l~---------------~~~~~~~~~~~~~i~~qi~~~l~~lH~~~  140 (283)
T 3gen_A           92 RPIFIIT--EYMANGCLLNYLR---------------EMRHRFQTQQLLEMCKDVCEAMEYLESKQ  140 (283)
T ss_dssp             SSEEEEE--CCCTTCBHHHHHH---------------CGGGCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             CCeEEEE--eccCCCcHHHHHH---------------HhccCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            8888888  7776666655331               11234789999999999999999999864

>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A*

Probab=99.72  E-value=3.1e-17  Score=119.46  Aligned_cols=126  Identities=23%  Similarity=0.309  Sum_probs=101.7

Q ss_pred             eechhhHHhhcC----------CeeecceecccCCeeEEEEEE-cCCCEEEEEEeeccCccchhHHHHHHHHHhcccccC
Q 039630           23 KISYNELKIATN----------GFRTSNKIGEGGFGSVYKGRL-EDGTVVAVNVLSVESKQGETEFMSEVASMANINICH   91 (174)
Q Consensus        23 ~~~~~~~~~~~~----------~~~~~~~lg~G~~g~V~~~~~-~~~~~~avK~~~~~~~~~~~~~~~e~~~l~~l~~~h   91 (174)
                      .++.+++....+          .|...+.||+|+||.||+|.. .+|+.||||+++.........+.+|+.+++.++  |
T Consensus        24 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~G~~g~V~~a~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~--h  101 (321)
T 2c30_A           24 VVTHEQFKAALRMVVDQGDPRLLLDSYVKIGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQ--H  101 (321)
T ss_dssp             -CCHHHHHHHHHTTSCSSCHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCSHHHHHHHHHHHTTCC--C
T ss_pred             cCcHHHHHHHHhhccCCCCchhhhhccEEeccCCCeEEEEEEECCCCcEEEEEEEeccchhHHHHHHHHHHHHHhCC--C
Confidence            456666654443          277778999999999999995 479999999998766666778899999999999  9


Q ss_pred             CCeeeeecceecCCCcccchhhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhc
Q 039630           92 ENLVKLHGGCIDGPSRILAPLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEE  169 (174)
Q Consensus        92 ~~i~~~~~~~~~~~~~~lv~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~  169 (174)
                      +||+++++.+...+..++++  ++.+++.+...+                 ....+++..+..++.|++.||.|||++
T Consensus       102 ~niv~~~~~~~~~~~~~lv~--e~~~~~~L~~~l-----------------~~~~l~~~~~~~i~~qi~~~L~~LH~~  160 (321)
T 2c30_A          102 FNVVEMYKSYLVGEELWVLM--EFLQGGALTDIV-----------------SQVRLNEEQIATVCEAVLQALAYLHAQ  160 (321)
T ss_dssp             TTBCCEEEEEEETTEEEEEE--CCCCSCBHHHHH-----------------TTCCCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             CCcceEEEEEEECCEEEEEE--ecCCCCCHHHHH-----------------HhcCCCHHHHHHHHHHHHHHHHHHHHC
Confidence            99999999999988888888  776666665422                 112478999999999999999999985

>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ...

Probab=99.72  E-value=2.6e-17  Score=120.28  Aligned_cols=138  Identities=19%  Similarity=0.295  Sum_probs=99.0

Q ss_pred             hHHhhcCCeeecceecccCCeeEEEEEE--------cCCCEEEEEEeeccC-ccchhHHHHHHHHHhcc-cccCCCeeee
Q 039630           28 ELKIATNGFRTSNKIGEGGFGSVYKGRL--------EDGTVVAVNVLSVES-KQGETEFMSEVASMANI-NICHENLVKL   97 (174)
Q Consensus        28 ~~~~~~~~~~~~~~lg~G~~g~V~~~~~--------~~~~~~avK~~~~~~-~~~~~~~~~e~~~l~~l-~~~h~~i~~~   97 (174)
                      .|....++|.+.+.||+|+||.||++..        .++..||+|+++... ......+.+|+.++..+ +  ||||+++
T Consensus        29 ~~~~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~--hp~iv~~  106 (334)
T 2pvf_A           29 KWEFPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGK--HKNIINL  106 (334)
T ss_dssp             TTBCCGGGEEEEEEEEECSSCEEEEEEETTCSTTCC---CEEEEEECCTTCCHHHHHHHHHHHHHHHHHCC--CTTBCCE
T ss_pred             cccCCHhHeEEeeEEeecCceeEEEeEeccccccccccceEEEEeeeccCCcHHHHHHHHHHHHHHHHhhc--CCCEeeE
Confidence            3455667899999999999999999984        346789999997552 33456788999999999 7  9999999


Q ss_pred             ecceecCCCcccchhhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhc
Q 039630           98 HGGCIDGPSRILAPLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEE  169 (174)
Q Consensus        98 ~~~~~~~~~~~lv~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~  169 (174)
                      ++++...+..++++  ++.+++.|...+.....................+++..++.++.|++.||.|||++
T Consensus       107 ~~~~~~~~~~~lv~--e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~  176 (334)
T 2pvf_A          107 LGACTQDGPLYVIV--EYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQ  176 (334)
T ss_dssp             EEEECSSSCCEEEE--ECCTTCBHHHHHHTTSCTTCCSCC--------CCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             EEEEccCCceEEEE--ECCCCCcHHHHHHHhccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhC
Confidence            99999988888888  77777776654432211100000000011123478899999999999999999986

>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A*

Probab=99.72  E-value=4.3e-17  Score=120.55  Aligned_cols=118  Identities=19%  Similarity=0.274  Sum_probs=97.8

Q ss_pred             cCCeeecceecccCCeeEEEEE-EcCCCEEEEEEeeccCcc------chhHHHHHHHHHhcccccCCCeeeeecceecCC
Q 039630           33 TNGFRTSNKIGEGGFGSVYKGR-LEDGTVVAVNVLSVESKQ------GETEFMSEVASMANINICHENLVKLHGGCIDGP  105 (174)
Q Consensus        33 ~~~~~~~~~lg~G~~g~V~~~~-~~~~~~~avK~~~~~~~~------~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~~~~  105 (174)
                      .+.|.+.+.||+|+||.||++. ..+|..+|+|+++.....      ....+.+|+.++..++  ||||+++++++...+
T Consensus        11 ~~~y~~~~~LG~G~fg~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~--hpnIv~l~~~~~~~~   88 (361)
T 2yab_A           11 EDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVL--HPNIITLHDVYENRT   88 (361)
T ss_dssp             GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHTTCC--CTTBCCEEEEEECSS
T ss_pred             hhceEEeeEEeeCcCEEEEEEEECCCCCEEEEEEEEccccccccchhHHHHHHHHHHHHHhCC--CcCCCcEEEEEEeCC
Confidence            3569999999999999999999 457899999999765321      3567899999999999  999999999999988


Q ss_pred             CcccchhhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhcc
Q 039630          106 SRILAPLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEI  170 (174)
Q Consensus       106 ~~~lv~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  170 (174)
                      ..++++  ++.+++.+...+                .....+++..+..++.||+.||.|||++.
T Consensus        89 ~~~lv~--e~~~gg~L~~~l----------------~~~~~l~~~~~~~i~~qi~~aL~~LH~~g  135 (361)
T 2yab_A           89 DVVLIL--ELVSGGELFDFL----------------AQKESLSEEEATSFIKQILDGVNYLHTKK  135 (361)
T ss_dssp             EEEEEE--ECCCSCBHHHHH----------------TTCSCCBHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             EEEEEE--EcCCCCcHHHHH----------------HhcCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            888888  777777666533                12235789999999999999999999853

>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A*

Probab=99.72  E-value=2.1e-17  Score=119.09  Aligned_cols=117  Identities=15%  Similarity=0.237  Sum_probs=98.8

Q ss_pred             cCCeeecceecccCCeeEEEEE-EcCCCEEEEEEeeccCccchhHHHHHHHHHhcccccCCCeeeeecceecCCCcccch
Q 039630           33 TNGFRTSNKIGEGGFGSVYKGR-LEDGTVVAVNVLSVESKQGETEFMSEVASMANINICHENLVKLHGGCIDGPSRILAP  111 (174)
Q Consensus        33 ~~~~~~~~~lg~G~~g~V~~~~-~~~~~~~avK~~~~~~~~~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~~~~~~~lv~  111 (174)
                      .++|++.+.||+|+||.||++. ..+++.||+|++..........+.+|+.+++.++  ||||+++++.+...+..++++
T Consensus        19 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~E~~~l~~l~--hp~iv~~~~~~~~~~~~~lv~   96 (297)
T 3fxz_A           19 KKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENK--NPNIVNYLDSYLVGDELWVVM   96 (297)
T ss_dssp             GGTBCCCEEEEEETTEEEEEEEBTTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHHCC--CTTBCCEEEEEEETTEEEEEE
T ss_pred             hhceeeeeeeccCCCeEEEEEEECCCCcEEEEEEeecccccHHHHHHHHHHHHhcCC--CCCCCeEeEEEEECCEEEEEE
Confidence            3579999999999999999998 5678999999998665566777899999999999  999999999999998888888


Q ss_pred             hhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhcc
Q 039630          112 LQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEI  170 (174)
Q Consensus       112 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  170 (174)
                        ++.+++.+...+.                 ...+++..+..++.|++.||+|||++.
T Consensus        97 --e~~~~~~L~~~~~-----------------~~~~~~~~~~~~~~qi~~~l~~lH~~~  136 (297)
T 3fxz_A           97 --EYLAGGSLTDVVT-----------------ETCMDEGQIAAVCRECLQALEFLHSNQ  136 (297)
T ss_dssp             --ECCTTCBHHHHHH-----------------HSCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             --ECCCCCCHHHHHh-----------------hcCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence              7777666655331                 124788899999999999999999863

>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A

Probab=99.72  E-value=2.7e-17  Score=121.99  Aligned_cols=137  Identities=19%  Similarity=0.285  Sum_probs=99.9

Q ss_pred             HhhcCCeeecceecccCCeeEEEEEE--------cCCCEEEEEEeeccC-ccchhHHHHHHHHHhcc-cccCCCeeeeec
Q 039630           30 KIATNGFRTSNKIGEGGFGSVYKGRL--------EDGTVVAVNVLSVES-KQGETEFMSEVASMANI-NICHENLVKLHG   99 (174)
Q Consensus        30 ~~~~~~~~~~~~lg~G~~g~V~~~~~--------~~~~~~avK~~~~~~-~~~~~~~~~e~~~l~~l-~~~h~~i~~~~~   99 (174)
                      ....++|.+.+.||+|+||.||+|..        .++..||+|+++... ......+.+|+.+++.+ +  ||||+++++
T Consensus        77 ~~~~~~~~~~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~--hpnIv~~~~  154 (370)
T 2psq_A           77 EFPRDKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGK--HKNIINLLG  154 (370)
T ss_dssp             BCCGGGEEEEEEESCCSSSEEEEEEEETCSTTCTTCEEEEEEEECCTTCBHHHHHHHHHHHHHHHHSCC--CTTBCCEEE
T ss_pred             cccHHHCEeeeEEeeCCCeeEEEEEEecccCcCcCcceeEEEEEecCCcCHHHHHHHHHHHHHHHHhcC--CCCEeeEEE
Confidence            33456799999999999999999984        234579999997552 33456789999999999 7  999999999


Q ss_pred             ceecCCCcccchhhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhcc
Q 039630          100 GCIDGPSRILAPLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEI  170 (174)
Q Consensus       100 ~~~~~~~~~lv~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  170 (174)
                      ++...+..++++  ++.+++.|...+.....................+++..++.++.|++.||.|||++.
T Consensus       155 ~~~~~~~~~lv~--e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~  223 (370)
T 2psq_A          155 ACTQDGPLYVIV--EYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQK  223 (370)
T ss_dssp             EECSSSSCEEEE--ECCTTCBHHHHHHHTCCC-----------CCCCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             EEccCCCEEEEE--EcCCCCCHHHHHHhhCCccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            999999989988  777777776654332211100000000112235789999999999999999999863

>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7

Probab=99.71  E-value=3.6e-17  Score=122.00  Aligned_cols=117  Identities=19%  Similarity=0.272  Sum_probs=97.9

Q ss_pred             CCeeecceecccCCeeEEEEE-EcCCCEEEEEEeeccCccchhHHHHHHHHHhcccccCCCeeeeecceecCCCcccchh
Q 039630           34 NGFRTSNKIGEGGFGSVYKGR-LEDGTVVAVNVLSVESKQGETEFMSEVASMANINICHENLVKLHGGCIDGPSRILAPL  112 (174)
Q Consensus        34 ~~~~~~~~lg~G~~g~V~~~~-~~~~~~~avK~~~~~~~~~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~~~~~~~lv~~  112 (174)
                      +.|.+.+.||+|+||.||+|. ..++..+|+|++..........+.+|+.++..++  |+||+++++++...+..++++ 
T Consensus        51 ~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~E~~il~~l~--hpnIv~~~~~~~~~~~~~lv~-  127 (387)
T 1kob_A           51 DYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLH--HPKLINLHDAFEDKYEMVLIL-  127 (387)
T ss_dssp             GTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCC--STTBCCEEEEEECSSEEEEEE-
T ss_pred             cceEEEEEEecCCCEEEEEEEECCCCCEEEEEEecccchhhHHHHHHHHHHHHhCC--CcCCCeEEEEEEeCCEEEEEE-
Confidence            579999999999999999998 4578899999998665455667899999999999  999999999999988888888 


Q ss_pred             hhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhc
Q 039630          113 QASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEE  169 (174)
Q Consensus       113 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~  169 (174)
                       ++..++.+...+.               .....+++..+..++.|++.||+|||++
T Consensus       128 -E~~~gg~L~~~l~---------------~~~~~l~~~~~~~i~~qi~~aL~~LH~~  168 (387)
T 1kob_A          128 -EFLSGGELFDRIA---------------AEDYKMSEAEVINYMRQACEGLKHMHEH  168 (387)
T ss_dssp             -ECCCCCBHHHHTT---------------CTTCCBCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             -EcCCCCcHHHHHH---------------hhcCCCCHHHHHHHHHHHHHHHHHHHhC
Confidence             7777666655331               1223578999999999999999999975

>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}

Probab=99.71  E-value=3e-17  Score=126.25  Aligned_cols=119  Identities=23%  Similarity=0.331  Sum_probs=95.1

Q ss_pred             hcCCeeecceecccCCeeEEEEE-EcCCCEEEEEEeeccCc-------------cchhHHHHHHHHHhcccccCCCeeee
Q 039630           32 ATNGFRTSNKIGEGGFGSVYKGR-LEDGTVVAVNVLSVESK-------------QGETEFMSEVASMANINICHENLVKL   97 (174)
Q Consensus        32 ~~~~~~~~~~lg~G~~g~V~~~~-~~~~~~~avK~~~~~~~-------------~~~~~~~~e~~~l~~l~~~h~~i~~~   97 (174)
                      ..+.|.+++.||+|+||.||+|. ..++..+|+|+++....             .....+.+|+.+++.++  ||||+++
T Consensus        34 i~~~Y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~--hpniv~~  111 (504)
T 3q5i_A           34 IGESYFKVRKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKSLD--HPNIIKL  111 (504)
T ss_dssp             GGGTEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEC----------------CTHHHHHHHHHHHHTCC--CTTBCCE
T ss_pred             cccceEEEeEecccCCeEEEEEEECCCCcEEEEEEEEhhhcccccccccchhhHHHHHHHHHHHHHHHhCC--CCCCCeE
Confidence            44679999999999999999999 45688999999975421             23567889999999999  9999999


Q ss_pred             ecceecCCCcccchhhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhcc
Q 039630           98 HGGCIDGPSRILAPLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEI  170 (174)
Q Consensus        98 ~~~~~~~~~~~lv~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  170 (174)
                      ++++......++|+  ++.+++.+...+.                ....+++..+..++.|++.||.|||++.
T Consensus       112 ~~~~~~~~~~~lv~--e~~~gg~L~~~l~----------------~~~~~~~~~~~~i~~qi~~~l~~lH~~~  166 (504)
T 3q5i_A          112 FDVFEDKKYFYLVT--EFYEGGELFEQII----------------NRHKFDECDAANIMKQILSGICYLHKHN  166 (504)
T ss_dssp             EEEEECSSEEEEEE--ECCTTCBHHHHHH----------------HHSCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             EEEEEcCCEEEEEE--ecCCCCcHHHHHH----------------HcCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            99999988888888  7777776655432                1234789999999999999999999863

>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7}

Probab=99.71  E-value=3.1e-17  Score=120.99  Aligned_cols=152  Identities=21%  Similarity=0.243  Sum_probs=103.0

Q ss_pred             CCCcccccccccccccc-CcccceechhhHHhhcCCeeecceecccCCeeEEEEE-EcCCCEEEEEEeeccCccchhHHH
Q 039630            1 MHGHSQYSIINYSRKVQ-GYKFSKISYNELKIATNGFRTSNKIGEGGFGSVYKGR-LEDGTVVAVNVLSVESKQGETEFM   78 (174)
Q Consensus         1 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~lg~G~~g~V~~~~-~~~~~~~avK~~~~~~~~~~~~~~   78 (174)
                      ||-|...++..+....+ ......++++......++|.+.+.||+|+||.||+|. ..++..||+|+++.. ......+.
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~-~~~~~~~~   79 (360)
T 3llt_A            1 MHHHHHHSSGRENLYFQGDDEIVHFSWKKGMLLNNAFLVIRKMGDGTFGRVLLCQHIDNKKYYAVKVVRNI-KKYTRSAK   79 (360)
T ss_dssp             -------------------CGGGSCCCCTTCEETTTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSC-HHHHHHHH
T ss_pred             CCccccccccccceeeecCccceeeeeecceEecCEEEEEEEEcccCCeEEEEEEECCCCeEEEEEEeccc-hhhhhhhH
Confidence            55554444444333332 3555677888777788899999999999999999999 467889999999633 23445667


Q ss_pred             HHHHHHhcccc---cCCCeeeeecceecCCCcccchhhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHH
Q 039630           79 SEVASMANINI---CHENLVKLHGGCIDGPSRILAPLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREI  155 (174)
Q Consensus        79 ~e~~~l~~l~~---~h~~i~~~~~~~~~~~~~~lv~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  155 (174)
                      .|+.++..+..   .|+||+++++.+...+..++++  ++. ++.+...+..              .....+++..+..+
T Consensus        80 ~e~~~l~~l~~~~~~h~~iv~~~~~~~~~~~~~lv~--e~~-~~~L~~~~~~--------------~~~~~~~~~~~~~i  142 (360)
T 3llt_A           80 IEADILKKIQNDDINNNNIVKYHGKFMYYDHMCLIF--EPL-GPSLYEIITR--------------NNYNGFHIEDIKLY  142 (360)
T ss_dssp             HHHHHHHHTCCCSTTGGGBCCEEEEEEETTEEEEEE--CCC-CCBHHHHHHH--------------TTTCCCCHHHHHHH
T ss_pred             HHHHHHHHhcccCCCCCCeecccceeeECCeeEEEE--cCC-CCCHHHHHHh--------------cCCCCCCHHHHHHH
Confidence            78888887631   2999999999999988888888  544 4444432211              11224788899999


Q ss_pred             HHHHHHHHHHhhhcc
Q 039630          156 ALGIARGLAYIHEEI  170 (174)
Q Consensus       156 ~~qi~~gl~yLH~~~  170 (174)
                      +.|++.||+|||++.
T Consensus       143 ~~qi~~aL~~LH~~~  157 (360)
T 3llt_A          143 CIEILKALNYLRKMS  157 (360)
T ss_dssp             HHHHHHHHHHHHHTT
T ss_pred             HHHHHHHHHHHHHCC
Confidence            999999999999753

>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A*

Probab=99.71  E-value=4.4e-17  Score=118.76  Aligned_cols=117  Identities=20%  Similarity=0.277  Sum_probs=93.9

Q ss_pred             CCeeecceecccCCeeEEEEE-EcCCCEEEEEEeeccC-ccchhHHHHHHHHHhcccccCCCeeeeecceecCCCcccch
Q 039630           34 NGFRTSNKIGEGGFGSVYKGR-LEDGTVVAVNVLSVES-KQGETEFMSEVASMANINICHENLVKLHGGCIDGPSRILAP  111 (174)
Q Consensus        34 ~~~~~~~~lg~G~~g~V~~~~-~~~~~~~avK~~~~~~-~~~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~~~~~~~lv~  111 (174)
                      ++|++.+.||+|+||.||++. ..+++.||+|++.... ......+.+|+.+++.++  |+||+++++.+...+..++++
T Consensus         7 ~~y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~--hpnIv~~~~~~~~~~~~~lv~   84 (323)
T 3tki_A            7 EDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLN--HENVVKFYGHRREGNIQYLFL   84 (323)
T ss_dssp             TCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC-------CHHHHHHHHHHCC--CTTBCCEEEEEECSSEEEEEE
T ss_pred             hhceeeeEEecCCCEEEEEEEECCCCcEEEEEEEEcccccchHHHHHHHHHHHHhCC--CCCCCeEEEEEecCCeEEEEE
Confidence            579999999999999999998 4578999999997553 233467889999999999  999999999999888888888


Q ss_pred             hhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhcc
Q 039630          112 LQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEI  170 (174)
Q Consensus       112 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  170 (174)
                        ++.+++.+...+                .....+++..+..++.|++.||+|||++.
T Consensus        85 --e~~~~~~L~~~l----------------~~~~~~~~~~~~~i~~qi~~aL~~LH~~g  125 (323)
T 3tki_A           85 --EYCSGGELFDRI----------------EPDIGMPEPDAQRFFHQLMAGVVYLHGIG  125 (323)
T ss_dssp             --ECCTTEEGGGGS----------------BTTTBCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             --EcCCCCcHHHHH----------------hhcCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence              666666655422                22335889999999999999999999753

>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A*

Probab=99.71  E-value=2.1e-17  Score=124.99  Aligned_cols=126  Identities=19%  Similarity=0.181  Sum_probs=101.8

Q ss_pred             hhhHHhhcCCeeecceecccCCeeEEEEEE-cCCCEEEEEEeecc---CccchhHHHHHHHHHhcccccCCCeeeeecce
Q 039630           26 YNELKIATNGFRTSNKIGEGGFGSVYKGRL-EDGTVVAVNVLSVE---SKQGETEFMSEVASMANINICHENLVKLHGGC  101 (174)
Q Consensus        26 ~~~~~~~~~~~~~~~~lg~G~~g~V~~~~~-~~~~~~avK~~~~~---~~~~~~~~~~e~~~l~~l~~~h~~i~~~~~~~  101 (174)
                      ..++....++|.+.++||+|+||.||++.. .+++.+|+|+++..   .......+..|+.++..++  |+||+++++++
T Consensus        66 ~~~~~~~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~E~~il~~~~--hp~Iv~l~~~~  143 (437)
T 4aw2_A           66 VKQMRLHREDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGD--SKWITTLHYAF  143 (437)
T ss_dssp             HHHHSCCGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTTTCCHHHHHHHHHHSC--TTTBCCEEEEE
T ss_pred             hhcccCChhheEEEEEEEeCCCEEEEEEEEcCCCcEEEEEEEEHHHhhhHHHHHHHHHHHHHHHhCC--CCCEEEEEEEE
Confidence            344555667899999999999999999994 45889999999753   1223445889999999998  99999999999


Q ss_pred             ecCCCcccchhhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhcc
Q 039630          102 IDGPSRILAPLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEI  170 (174)
Q Consensus       102 ~~~~~~~lv~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  170 (174)
                      .+.+..++|+  ++.+++.|...+..               ....+++..+..++.|++.||.|||++.
T Consensus       144 ~~~~~~~lV~--Ey~~gg~L~~~l~~---------------~~~~l~e~~~~~~~~qi~~aL~~LH~~g  195 (437)
T 4aw2_A          144 QDDNNLYLVM--DYYVGGDLLTLLSK---------------FEDRLPEEMARFYLAEMVIAIDSVHQLH  195 (437)
T ss_dssp             ECSSEEEEEE--CCCTTCBHHHHHHT---------------TTTCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             eeCCEEEEEE--ecCCCCcHHHHHHH---------------ccCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            9999989988  77777777664421               1235889999999999999999999753

>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7

Probab=99.71  E-value=6.5e-17  Score=117.79  Aligned_cols=117  Identities=15%  Similarity=0.237  Sum_probs=96.8

Q ss_pred             cCCeeecceecccCCeeEEEEE-EcCCCEEEEEEeeccCccchhHHHHHHHHHhcccccCCCeeeeecceecCCCcccch
Q 039630           33 TNGFRTSNKIGEGGFGSVYKGR-LEDGTVVAVNVLSVESKQGETEFMSEVASMANINICHENLVKLHGGCIDGPSRILAP  111 (174)
Q Consensus        33 ~~~~~~~~~lg~G~~g~V~~~~-~~~~~~~avK~~~~~~~~~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~~~~~~~lv~  111 (174)
                      .++|.+.+.||+|+||.||+|. ..++..+|+|.++.. ......+.+|+.+++.++  ||||+++++.+...+..++++
T Consensus         4 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~a~K~~~~~-~~~~~~~~~E~~~l~~l~--hpnIv~~~~~~~~~~~~~lv~   80 (321)
T 1tki_A            4 YEKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVK-GTDQVLVKKEISILNIAR--HRNILHLHESFESMEELVMIF   80 (321)
T ss_dssp             TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCC-THHHHHHHHHHHHHHHSC--CTTBCCEEEEEEETTEEEEEE
T ss_pred             hhceEeeeEEecCCCeEEEEEEECCCCcEEEEEEEecC-cccHHHHHHHHHHHHhCC--CCCCCeEeEEEecCCEEEEEE
Confidence            4679999999999999999999 456889999999744 234556889999999999  999999999999988888888


Q ss_pred             hhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhc
Q 039630          112 LQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEE  169 (174)
Q Consensus       112 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~  169 (174)
                        ++.+++.+...+.               .....+++..+..++.|++.||.|||++
T Consensus        81 --e~~~g~~L~~~l~---------------~~~~~~~~~~~~~i~~qi~~al~~lH~~  121 (321)
T 1tki_A           81 --EFISGLDIFERIN---------------TSAFELNEREIVSYVHQVCEALQFLHSH  121 (321)
T ss_dssp             --CCCCCCBHHHHHT---------------SSSCCCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             --EeCCCCCHHHHHH---------------hcCCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence              7777666665331               1223578999999999999999999985

>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B

Probab=99.70  E-value=4.1e-17  Score=124.01  Aligned_cols=127  Identities=22%  Similarity=0.310  Sum_probs=102.7

Q ss_pred             echhhHHhhcCCeeecceecccCCeeEEEEEEcCCCEEEEEEeeccCccchhHHHHHHHHHhcccccCCCeeeeecceec
Q 039630           24 ISYNELKIATNGFRTSNKIGEGGFGSVYKGRLEDGTVVAVNVLSVESKQGETEFMSEVASMANINICHENLVKLHGGCID  103 (174)
Q Consensus        24 ~~~~~~~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~avK~~~~~~~~~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~~  103 (174)
                      +..+.|.+..++|.+.+.||+|+||.||+|...++..||||.++.. ....+.+.+|+.+++.++  ||||+++++++. 
T Consensus       178 ~~~~~~~i~~~~~~~~~~lG~G~fg~V~~~~~~~~~~vavK~~~~~-~~~~~~~~~E~~~l~~l~--h~~iv~l~~~~~-  253 (454)
T 1qcf_A          178 WEKDAWEIPRESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPG-SMSVEAFLAEANVMKTLQ--HDKLVKLHAVVT-  253 (454)
T ss_dssp             CCTTCSBCCGGGEEEEEEEECCSSEEEEEEEETTTEEEEEEEECTT-SBCHHHHHHHHHHHTTCC--CTTBCCEEEEEC-
T ss_pred             ccccceeechHHeEEEEEcccCCceEEEEEEECCccEEEEEEecCC-CccHHHHHHHHHHHhhCC--CCCEeeEEEEEe-
Confidence            3446677788899999999999999999999887889999999754 345678999999999999  999999999886 


Q ss_pred             CCCcccchhhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhcc
Q 039630          104 GPSRILAPLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEI  170 (174)
Q Consensus       104 ~~~~~lv~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  170 (174)
                      .+..++++  ++..++.|...+..              .....+++..++.++.|++.||+|||++.
T Consensus       254 ~~~~~lv~--e~~~~g~L~~~l~~--------------~~~~~~~~~~~~~~~~qi~~~l~~LH~~~  304 (454)
T 1qcf_A          254 KEPIYIIT--EFMAKGSLLDFLKS--------------DEGSKQPLPKLIDFSAQIAEGMAFIEQRN  304 (454)
T ss_dssp             SSSCEEEE--CCCTTCBHHHHHHS--------------HHHHTCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             CCccEEEE--eecCCCcHHHHHHh--------------ccCCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            55677777  77777776654421              11124688889999999999999999863

>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii}

Probab=99.70  E-value=1.8e-17  Score=118.68  Aligned_cols=120  Identities=17%  Similarity=0.222  Sum_probs=96.7

Q ss_pred             CeeecceecccCCeeEEEEE-EcCCCEEEEEEeeccC-ccchhHHHHHHHHHhcccccCCCeeeeecceecCCCcccchh
Q 039630           35 GFRTSNKIGEGGFGSVYKGR-LEDGTVVAVNVLSVES-KQGETEFMSEVASMANINICHENLVKLHGGCIDGPSRILAPL  112 (174)
Q Consensus        35 ~~~~~~~lg~G~~g~V~~~~-~~~~~~~avK~~~~~~-~~~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~~~~~~~lv~~  112 (174)
                      .|.+.+.||+|+||.||++. ..++..+|+|.+.... ......+.+|+.+++.++  ||||+++++.+...+..++++ 
T Consensus        23 ~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~--hp~iv~~~~~~~~~~~~~lv~-   99 (285)
T 3is5_A           23 LFIFKRKLGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLD--HPNIIKIFEVFEDYHNMYIVM-   99 (285)
T ss_dssp             HEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCCSCHHHHHHHHHHHHTCC--CTTBCCEEEEEECSSEEEEEE-
T ss_pred             heeecceeccCCCeEEEEEEEccCCceEEEEEeeccccchhHHHHHHHHHHHHhCC--CchHHhHHHheecCCeEEEEE-
Confidence            58888999999999999998 4568899999997653 345678899999999999  999999999999888888888 


Q ss_pred             hhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhcc
Q 039630          113 QASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEI  170 (174)
Q Consensus       113 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  170 (174)
                       ++.+++.+...+...            ......+++..+..++.|++.||+|||++.
T Consensus       100 -e~~~~~~L~~~l~~~------------~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~  144 (285)
T 3is5_A          100 -ETCEGGELLERIVSA------------QARGKALSEGYVAELMKQMMNALAYFHSQH  144 (285)
T ss_dssp             -CCCSCCBHHHHHHHH------------HHHTCCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             -EeCCCCcHHHHHHhh------------hhcccCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence             776666665533211            011235789999999999999999999864

>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A*

Probab=99.70  E-value=5.8e-17  Score=114.88  Aligned_cols=121  Identities=21%  Similarity=0.341  Sum_probs=98.8

Q ss_pred             HhhcCCeeecceecccCCeeEEEEEEcCCCEEEEEEeeccCccchhHHHHHHHHHhcccccCCCeeeeecceecCCCccc
Q 039630           30 KIATNGFRTSNKIGEGGFGSVYKGRLEDGTVVAVNVLSVESKQGETEFMSEVASMANINICHENLVKLHGGCIDGPSRIL  109 (174)
Q Consensus        30 ~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~avK~~~~~~~~~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~~~~~~~l  109 (174)
                      ....++|++.+.||+|+||.||++...++..+|+|+++.. ......+.+|+.++..++  ||||+++++++...+..++
T Consensus         4 ~l~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~-~~~~~~~~~E~~~l~~l~--h~~i~~~~~~~~~~~~~~l   80 (268)
T 3sxs_A            4 ELKREEITLLKELGSGQFGVVKLGKWKGQYDVAVKMIKEG-SMSEDEFFQEAQTMMKLS--HPKLVKFYGVCSKEYPIYI   80 (268)
T ss_dssp             BCCGGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECBT-TBCHHHHHHHHHHHHHCC--CTTBCCEEEEECSSSSEEE
T ss_pred             EechhheeeeeeeccCCCceEEEEEecCceeEEEEEeccC-CCcHHHHHHHHHHHHhCC--CCCEeeEEEEEccCCceEE
Confidence            3445679999999999999999999887888999999754 234567899999999999  9999999999998888888


Q ss_pred             chhhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhcc
Q 039630          110 APLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEI  170 (174)
Q Consensus       110 v~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  170 (174)
                      ++  ++.+++.+...+..               ....+++..+..++.|++.||.|||++.
T Consensus        81 v~--e~~~~~~L~~~l~~---------------~~~~~~~~~~~~i~~qi~~~l~~lH~~~  124 (268)
T 3sxs_A           81 VT--EYISNGCLLNYLRS---------------HGKGLEPSQLLEMCYDVCEGMAFLESHQ  124 (268)
T ss_dssp             EE--ECCTTCBHHHHHHH---------------HGGGCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             EE--EccCCCcHHHHHHH---------------cCCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            88  77666666553311               1224788999999999999999999863

>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A*

Probab=99.70  E-value=6.2e-17  Score=115.86  Aligned_cols=119  Identities=26%  Similarity=0.384  Sum_probs=97.4

Q ss_pred             cCCeeecceecccCCeeEEEEEE-cCC-------CEEEEEEeeccCccchhHHHHHHHHHhcccccCCCeeeeecceecC
Q 039630           33 TNGFRTSNKIGEGGFGSVYKGRL-EDG-------TVVAVNVLSVESKQGETEFMSEVASMANINICHENLVKLHGGCIDG  104 (174)
Q Consensus        33 ~~~~~~~~~lg~G~~g~V~~~~~-~~~-------~~~avK~~~~~~~~~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~~~  104 (174)
                      .++|.+.+.||+|+||.||++.. .++       ..+|+|+++.......+.+.+|+.+++.++  |+||+++++++...
T Consensus         7 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~E~~~l~~l~--h~~iv~~~~~~~~~   84 (289)
T 4fvq_A            7 NEDLIFNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLS--HKHLVLNYGVCVCG   84 (289)
T ss_dssp             GGGEEEEEEEEEETTEEEEEEEEEEECGGGCEEEEEEEEEEECGGGGGGHHHHHHHHHHHHTSC--CTTBCCEEEEECCT
T ss_pred             hhHeeeeeeeccCCCceEEEEEEecccccccccchhhhhhhcccccHHHHHHHHHHHHHHHhCC--CCCEeEEEEEEEeC
Confidence            46799999999999999999983 334       479999997665566778999999999999  99999999999998


Q ss_pred             CCcccchhhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhcc
Q 039630          105 PSRILAPLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEI  170 (174)
Q Consensus       105 ~~~~lv~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  170 (174)
                      +..++++  ++.+++.+...+..               ....+++..+..++.|++.||.|||++.
T Consensus        85 ~~~~lv~--e~~~~~~L~~~l~~---------------~~~~~~~~~~~~i~~qi~~~L~~LH~~~  133 (289)
T 4fvq_A           85 DENILVQ--EFVKFGSLDTYLKK---------------NKNCINILWKLEVAKQLAAAMHFLEENT  133 (289)
T ss_dssp             TCCEEEE--ECCTTCBHHHHHHH---------------TGGGCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             CCCEEEE--ECCCCCCHHHHHHh---------------CCCCCCHHHHHHHHHHHHHHHHHHhhCC
Confidence            8888888  77776666654321               1223788889999999999999999864

>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ...

Probab=99.70  E-value=4.1e-17  Score=119.60  Aligned_cols=117  Identities=23%  Similarity=0.230  Sum_probs=97.7

Q ss_pred             CCeeecceecccCCeeEEEEE-EcCCCEEEEEEeecc---CccchhHHHHHHHHHhcccccCCCeeeeecceecCCCccc
Q 039630           34 NGFRTSNKIGEGGFGSVYKGR-LEDGTVVAVNVLSVE---SKQGETEFMSEVASMANINICHENLVKLHGGCIDGPSRIL  109 (174)
Q Consensus        34 ~~~~~~~~lg~G~~g~V~~~~-~~~~~~~avK~~~~~---~~~~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~~~~~~~l  109 (174)
                      ++|++++.||+|+||.||++. ..+++.+|+|+++..   .......+.+|+.++..++  ||||+++++.+...+..++
T Consensus         5 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~--hp~iv~l~~~~~~~~~~~l   82 (337)
T 1o6l_A            5 NDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTR--HPFLTALKYAFQTHDRLCF   82 (337)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCC--CTTBCCEEEEEECSSEEEE
T ss_pred             HHeEEEEEEecCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhCC--CCcCcceEEEEEeCCEEEE
Confidence            579999999999999999999 457899999999754   2345667889999999998  9999999999999998888


Q ss_pred             chhhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhcc
Q 039630          110 APLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEI  170 (174)
Q Consensus       110 v~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  170 (174)
                      ++  ++.+++.+...+.                ....+++..+..++.||+.||.|||++.
T Consensus        83 v~--E~~~gg~L~~~l~----------------~~~~~~~~~~~~~~~qi~~aL~~LH~~~  125 (337)
T 1o6l_A           83 VM--EYANGGELFFHLS----------------RERVFTEERARFYGAEIVSALEYLHSRD  125 (337)
T ss_dssp             EE--ECCTTCBHHHHHH----------------HHSCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             EE--eCCCCCcHHHHHH----------------hcCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            88  7777777765431                1234788999999999999999999863

>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A

Probab=99.70  E-value=3.1e-17  Score=125.96  Aligned_cols=125  Identities=26%  Similarity=0.424  Sum_probs=103.0

Q ss_pred             hhhHHhhcCCeeecceecccCCeeEEEEEEc-CCCEEEEEEeeccCccchhHHHHHHHHHhcccccCCCeeeeecceecC
Q 039630           26 YNELKIATNGFRTSNKIGEGGFGSVYKGRLE-DGTVVAVNVLSVESKQGETEFMSEVASMANINICHENLVKLHGGCIDG  104 (174)
Q Consensus        26 ~~~~~~~~~~~~~~~~lg~G~~g~V~~~~~~-~~~~~avK~~~~~~~~~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~~~  104 (174)
                      ...|.....+|.+.+.||+|+||.||+|... ++..||+|.++.. ......+.+|+.+++.++  |+||+++++++...
T Consensus       212 ~~~~~~~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~-~~~~~~~~~E~~~l~~l~--hpniv~l~~~~~~~  288 (495)
T 1opk_A          212 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKED-TMEVEEFLKEAAVMKEIK--HPNLVQLLGVCTRE  288 (495)
T ss_dssp             SSCCBCCGGGEEEEEESGGGTTSSEEEEEEGGGTEEEEEEECCSS-SSCHHHHHHHHHHHHHCC--CTTBCCEEEEECSS
T ss_pred             ccccccCHHHceeeeEecCCCCeEEEEEEEcCCCeEEEEEEecCc-ccchHHHHHHHHHHHhcC--CCCEeeEEEEEecC
Confidence            3456667788999999999999999999954 4889999999754 345678999999999999  99999999999998


Q ss_pred             CCcccchhhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhc
Q 039630          105 PSRILAPLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEE  169 (174)
Q Consensus       105 ~~~~lv~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~  169 (174)
                      +..++++  ++.+++.|...+..              .....+++..++.++.|++.||+|||++
T Consensus       289 ~~~~lv~--E~~~~g~L~~~l~~--------------~~~~~~~~~~~~~i~~qi~~~L~~LH~~  337 (495)
T 1opk_A          289 PPFYIIT--EFMTYGNLLDYLRE--------------CNRQEVSAVVLLYMATQISSAMEYLEKK  337 (495)
T ss_dssp             SSCEEEE--ECCTTCBHHHHHHH--------------SCTTTSCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             CcEEEEE--EccCCCCHHHHHHh--------------cCcCCCCHHHHHHHHHHHHHHHHHHHhC
Confidence            8888888  77777777664421              1123478899999999999999999985

>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens}

Probab=99.70  E-value=7.1e-17  Score=120.15  Aligned_cols=139  Identities=21%  Similarity=0.269  Sum_probs=103.5

Q ss_pred             hHHhhcCCeeecceecccCCeeEEEEEE-c-------CCCEEEEEEeeccC-ccchhHHHHHHHHHhcc-cccCCCeeee
Q 039630           28 ELKIATNGFRTSNKIGEGGFGSVYKGRL-E-------DGTVVAVNVLSVES-KQGETEFMSEVASMANI-NICHENLVKL   97 (174)
Q Consensus        28 ~~~~~~~~~~~~~~lg~G~~g~V~~~~~-~-------~~~~~avK~~~~~~-~~~~~~~~~e~~~l~~l-~~~h~~i~~~   97 (174)
                      .|....++|.+.+.||+|+||.||+|.. .       .+..||+|+++... ......+.+|+.++..+ +  |+||+++
T Consensus        63 ~~~i~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~--hpnIv~~  140 (382)
T 3tt0_A           63 RWELPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGK--HKNIINL  140 (382)
T ss_dssp             TTBCCGGGEEEEEEEEECSSEEEEEEEEETSSTTCTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCC--CTTBCCE
T ss_pred             ccccchhheEeeeEEecCCCeEEEEEEEccccccccccceEEEEEeeccccCHHHHHHHHHHHHHHHHhcC--Cchhhhh
Confidence            4566677899999999999999999983 2       23579999997552 33456789999999999 7  9999999


Q ss_pred             ecceecCCCcccchhhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhcc
Q 039630           98 HGGCIDGPSRILAPLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEI  170 (174)
Q Consensus        98 ~~~~~~~~~~~lv~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  170 (174)
                      ++++...+..++++  ++.+++.|...+.....................+++..++.++.|++.||.|||++.
T Consensus       141 ~~~~~~~~~~~lv~--e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~  211 (382)
T 3tt0_A          141 LGACTQDGPLYVIV--EYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKK  211 (382)
T ss_dssp             EEEECSSSSCEEEE--ECCTTCBHHHHHHHTCCSSSSSCCCCCSSCCCCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             eeeeccCCceEEEE--EecCCCcHHHHHHHhcccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhCC
Confidence            99999998888888  777777776654332211110011111122345899999999999999999999863

>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B

Probab=99.70  E-value=7.9e-17  Score=119.15  Aligned_cols=118  Identities=17%  Similarity=0.266  Sum_probs=97.9

Q ss_pred             cCCeeecceecccCCeeEEEEE-EcCCCEEEEEEeeccC--ccchhHHHHHHHHHhcccccCCCeeeeecceecCCCccc
Q 039630           33 TNGFRTSNKIGEGGFGSVYKGR-LEDGTVVAVNVLSVES--KQGETEFMSEVASMANINICHENLVKLHGGCIDGPSRIL  109 (174)
Q Consensus        33 ~~~~~~~~~lg~G~~g~V~~~~-~~~~~~~avK~~~~~~--~~~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~~~~~~~l  109 (174)
                      .++|.+.+.||+|+||.||+|. ..++..+|+|+++...  ......+.+|+.+++.++  ||||+++++.+...+..++
T Consensus        28 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~il~~l~--hpnIv~~~~~~~~~~~~~l  105 (362)
T 2bdw_A           28 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQ--HPNIVRLHDSIQEESFHYL  105 (362)
T ss_dssp             HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCHHHHHHHHHHHHHHHHCC--CTTBCCEEEEEECSSEEEE
T ss_pred             ccCeEEeeEEecCCCeEEEEEEECCCCCEEEEEEEEcccCCHHHHHHHHHHHHHHHhCC--CCCCCeEEEEEEeCCEEEE
Confidence            4569999999999999999998 4578999999997553  234567889999999999  9999999999999888888


Q ss_pred             chhhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhcc
Q 039630          110 APLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEI  170 (174)
Q Consensus       110 v~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  170 (174)
                      ++  ++..++.+...+.                ....+++..+..++.||+.||.|||++.
T Consensus       106 v~--e~~~gg~L~~~l~----------------~~~~~~~~~~~~~~~qi~~al~~lH~~~  148 (362)
T 2bdw_A          106 VF--DLVTGGELFEDIV----------------AREFYSEADASHCIQQILESIAYCHSNG  148 (362)
T ss_dssp             EE--CCCCSCBHHHHHT----------------TCSCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             EE--ecCCCCCHHHHHH----------------HcCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            88  7777776665431                2235789999999999999999999863

>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A*

Probab=99.70  E-value=2.2e-17  Score=123.98  Aligned_cols=123  Identities=20%  Similarity=0.154  Sum_probs=100.0

Q ss_pred             hhHHhhcCCeeecceecccCCeeEEEEE-EcCCCEEEEEEeecc---CccchhHHHHHHHHHhcccccCCCeeeeeccee
Q 039630           27 NELKIATNGFRTSNKIGEGGFGSVYKGR-LEDGTVVAVNVLSVE---SKQGETEFMSEVASMANINICHENLVKLHGGCI  102 (174)
Q Consensus        27 ~~~~~~~~~~~~~~~lg~G~~g~V~~~~-~~~~~~~avK~~~~~---~~~~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~  102 (174)
                      ..+....++|.+.+.||+|+||.||++. ..++..+|+|+++..   .......+.+|+.++..++  ||||+++++++.
T Consensus        62 ~~~~~~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~k~~~~~~~~~~~~~~E~~il~~l~--hp~Iv~l~~~~~  139 (410)
T 3v8s_A           62 RDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFAN--SPWVVQLFYAFQ  139 (410)
T ss_dssp             HHHSCCGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTCCCSTHHHHHHHHHHCC--CTTBCCEEEEEE
T ss_pred             HhcccCccccEEEEEEEcCCCEEEEEEEECCCCcEEEEEEEehhhhhhhHHHHHHHHHHHHHHhCC--CCCCCeEEEEEE
Confidence            3445556789999999999999999999 456889999999753   1233456889999999999  999999999999


Q ss_pred             cCCCcccchhhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhcc
Q 039630          103 DGPSRILAPLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEI  170 (174)
Q Consensus       103 ~~~~~~lv~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  170 (174)
                      +.+..++|+  ++.+++.|...+.                 ...+++..+..++.|++.||.|||++.
T Consensus       140 ~~~~~~lV~--E~~~gg~L~~~l~-----------------~~~~~e~~~~~~~~qi~~aL~~LH~~g  188 (410)
T 3v8s_A          140 DDRYLYMVM--EYMPGGDLVNLMS-----------------NYDVPEKWARFYTAEVVLALDAIHSMG  188 (410)
T ss_dssp             CSSEEEEEE--CCCTTEEHHHHHH-----------------HCCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             ECCEEEEEE--eCCCCCcHHHHHH-----------------cCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            998888888  7777777765331                 123788899999999999999999853

>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A*

Probab=99.70  E-value=8.5e-17  Score=117.34  Aligned_cols=130  Identities=15%  Similarity=0.183  Sum_probs=100.0

Q ss_pred             echhhHHhhcCCeeec-ceecccCCeeEEEEE-EcCCCEEEEEEeecc--CccchhHHHHHHHHHhcccccCCCeeeeec
Q 039630           24 ISYNELKIATNGFRTS-NKIGEGGFGSVYKGR-LEDGTVVAVNVLSVE--SKQGETEFMSEVASMANINICHENLVKLHG   99 (174)
Q Consensus        24 ~~~~~~~~~~~~~~~~-~~lg~G~~g~V~~~~-~~~~~~~avK~~~~~--~~~~~~~~~~e~~~l~~l~~~h~~i~~~~~   99 (174)
                      +.++......+.|.+. +.||+|+||.||++. ..+++.||+|+++..  .......+.+|+.++..+. .|+||+++++
T Consensus        18 ~~~~~~~~~~~~y~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~-~~~~iv~~~~   96 (327)
T 3lm5_A           18 LYFQSMENFNNFYILTSKELGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQDCRAEILHEIAVLELAK-SCPRVINLHE   96 (327)
T ss_dssp             CCSBCHHHHHHHEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESEETTEECHHHHHHHHHHHHHTT-TCTTBCCEEE
T ss_pred             hHHHHHHhhhhEEeeccceeCCCCCeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHHhcc-CCCCEEEEEE
Confidence            3444444445567776 899999999999998 456899999999754  2344677899999999986 3799999999


Q ss_pred             ceecCCCcccchhhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhcc
Q 039630          100 GCIDGPSRILAPLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEI  170 (174)
Q Consensus       100 ~~~~~~~~~lv~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  170 (174)
                      .+...+..++++  ++..++.+...+.              ......+++..+..++.|++.||+|||++.
T Consensus        97 ~~~~~~~~~lv~--e~~~~~~L~~~~~--------------~~~~~~~~~~~~~~i~~ql~~~L~~LH~~g  151 (327)
T 3lm5_A           97 VYENTSEIILIL--EYAAGGEIFSLCL--------------PELAEMVSENDVIRLIKQILEGVYYLHQNN  151 (327)
T ss_dssp             EEECSSEEEEEE--ECCTTEEGGGGGS--------------SCC-CCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             EEEeCCeEEEEE--EecCCCcHHHHHH--------------HhcccCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            999888888888  7766666654321              112245789999999999999999999863

>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A

Probab=99.69  E-value=1.4e-16  Score=114.14  Aligned_cols=117  Identities=22%  Similarity=0.332  Sum_probs=93.8

Q ss_pred             CCeeecceecccCCeeEEEEEEcCCCEEEEEEeeccC--ccchhHHHHHHHHHhcccccCCCeeeeecceecCCCcccch
Q 039630           34 NGFRTSNKIGEGGFGSVYKGRLEDGTVVAVNVLSVES--KQGETEFMSEVASMANINICHENLVKLHGGCIDGPSRILAP  111 (174)
Q Consensus        34 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~avK~~~~~~--~~~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~~~~~~~lv~  111 (174)
                      ++|++.+.||+|+||.||++...++..+|+|.+....  ......+.+|+.+++.++  ||||+++++.+...+..++++
T Consensus         2 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~--h~~iv~~~~~~~~~~~~~lv~   79 (288)
T 1ob3_A            2 EKYHGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELK--HSNIVKLYDVIHTKKRLVLVF   79 (288)
T ss_dssp             CSEEEEEEEEEETTEEEEEEEETTSCEEEEEEECCSSGGGCCCHHHHHHHHGGGGCC--CTTBCCEEEEEECSSCEEEEE
T ss_pred             ccchhhhhcccCCCEEEEEEEcCCCCEEEEEEEeccccccccchhHHHHHHHHHhcC--CCCEeeeeeEEccCCeEEEEE
Confidence            4689999999999999999998778999999997553  233467889999999999  999999999999988888888


Q ss_pred             hhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhcc
Q 039630          112 LQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEI  170 (174)
Q Consensus       112 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  170 (174)
                        ++.+. .+...+.               .....+++..+..++.|++.||.|||++.
T Consensus        80 --e~~~~-~l~~~~~---------------~~~~~~~~~~~~~~~~qi~~~l~~lH~~~  120 (288)
T 1ob3_A           80 --EHLDQ-DLKKLLD---------------VCEGGLESVTAKSFLLQLLNGIAYCHDRR  120 (288)
T ss_dssp             --ECCSE-EHHHHHH---------------TSTTCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             --EecCC-CHHHHHH---------------hcccCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence              55443 3332221               11234788899999999999999999864

>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens}

Probab=99.69  E-value=6.6e-17  Score=120.39  Aligned_cols=118  Identities=18%  Similarity=0.221  Sum_probs=98.0

Q ss_pred             cCCeeecceecccCCeeEEEEE-EcCCCEEEEEEeecc---CccchhHHHHHHHHHhcccccCCCeeeeecceecCCCcc
Q 039630           33 TNGFRTSNKIGEGGFGSVYKGR-LEDGTVVAVNVLSVE---SKQGETEFMSEVASMANINICHENLVKLHGGCIDGPSRI  108 (174)
Q Consensus        33 ~~~~~~~~~lg~G~~g~V~~~~-~~~~~~~avK~~~~~---~~~~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~~~~~~~  108 (174)
                      .++|.+.+.||+|+||.||.+. ..++..+|+|++...   .......+.+|+.++..++  ||||+++++++...+..+
T Consensus        14 ~~~y~i~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~il~~l~--hp~Iv~l~~~~~~~~~~~   91 (384)
T 4fr4_A           14 FDHFEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLE--HPFLVNLWYSFQDEEDMF   91 (384)
T ss_dssp             GGGEEEEEEEECCTTCCEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCC--CTTBCCEEEEEECSSEEE
T ss_pred             hHHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEehhhcccHHHHHHHHHHHHHHHhCC--CCCCCcEEEEEEeCCEEE
Confidence            3579999999999999999999 456889999999754   2344567889999999999  999999999999998888


Q ss_pred             cchhhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhcc
Q 039630          109 LAPLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEI  170 (174)
Q Consensus       109 lv~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  170 (174)
                      +++  ++..++.+...+.                ....+++..+..++.|++.||.|||++.
T Consensus        92 lv~--e~~~gg~L~~~l~----------------~~~~l~~~~~~~~~~qi~~aL~~LH~~g  135 (384)
T 4fr4_A           92 MVV--DLLLGGDLRYHLQ----------------QNVHFKEETVKLFICELVMALDYLQNQR  135 (384)
T ss_dssp             EEE--CCCTTEEHHHHHH----------------TTCCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             EEE--ecCCCCcHHHHHH----------------hcCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            888  7777777765331                2235789999999999999999999863

>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens}

Probab=99.69  E-value=1.6e-16  Score=115.92  Aligned_cols=116  Identities=22%  Similarity=0.300  Sum_probs=96.1

Q ss_pred             CCeeecceecccCCeeEEEEE-EcCCCEEEEEEeeccCc------cchhHHHHHHHHHhcccccCCCeeeeecceecCCC
Q 039630           34 NGFRTSNKIGEGGFGSVYKGR-LEDGTVVAVNVLSVESK------QGETEFMSEVASMANINICHENLVKLHGGCIDGPS  106 (174)
Q Consensus        34 ~~~~~~~~lg~G~~g~V~~~~-~~~~~~~avK~~~~~~~------~~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~~~~~  106 (174)
                      +.|.+.+.||+|+||.||++. ..++..+|+|+++....      .....+.+|+.++..++  ||||+++++++...+.
T Consensus        11 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~--hp~iv~~~~~~~~~~~   88 (326)
T 2y0a_A           11 DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ--HPNVITLHEVYENKTD   88 (326)
T ss_dssp             HHEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEBCCSTTCSSSBCHHHHHHHHHHHHHCC--CTTBCCEEEEEECSSE
T ss_pred             cceEeceEEeeCCCeEEEEEEECCCCcEEEEEEEEccccccccchhhHHHHHHHHHHHHhCC--CCCCCcEEEEEEeCCE
Confidence            458999999999999999999 45789999999975522      13567899999999999  9999999999999888


Q ss_pred             cccchhhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhc
Q 039630          107 RILAPLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEE  169 (174)
Q Consensus       107 ~~lv~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~  169 (174)
                      .++++  ++.+++.+...+                .....+++..+..++.|++.||.|||++
T Consensus        89 ~~lv~--e~~~~~~L~~~l----------------~~~~~~~~~~~~~i~~qi~~al~~lH~~  133 (326)
T 2y0a_A           89 VILIL--ELVAGGELFDFL----------------AEKESLTEEEATEFLKQILNGVYYLHSL  133 (326)
T ss_dssp             EEEEE--ECCCSCBHHHHH----------------TTSSCCBHHHHHHHHHHHHHHHHHHHHT
T ss_pred             EEEEE--EcCCCCCHHHHH----------------HhcCCcCHHHHHHHHHHHHHHHHHHHHC
Confidence            88888  777666665533                1223578999999999999999999975

>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...

Probab=99.69  E-value=9.7e-17  Score=121.90  Aligned_cols=127  Identities=23%  Similarity=0.332  Sum_probs=102.0

Q ss_pred             echhhHHhhcCCeeecceecccCCeeEEEEEEcCCCEEEEEEeeccCccchhHHHHHHHHHhcccccCCCeeeeecceec
Q 039630           24 ISYNELKIATNGFRTSNKIGEGGFGSVYKGRLEDGTVVAVNVLSVESKQGETEFMSEVASMANINICHENLVKLHGGCID  103 (174)
Q Consensus        24 ~~~~~~~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~avK~~~~~~~~~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~~  103 (174)
                      +....|.+..++|.+.+.||+|+||.||+|....+..||+|.++... ...+.+.+|+.+++.++  ||||+++++++..
T Consensus       174 ~~~~~~~i~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~--hp~iv~~~~~~~~  250 (452)
T 1fmk_A          174 LAKDAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLR--HEKLVQLYAVVSE  250 (452)
T ss_dssp             SSTTCSBCCGGGEEEEEEEEECSSCEEEEEEETTTEEEEEEECCTTS-SCHHHHHHHHHHHHHCC--CTTBCCEEEEECS
T ss_pred             CCccccccChhHceeeeeecCCCCeEEEEEEECCCceEEEEEeccCC-CCHHHHHHHHHHHHhCC--CCCEeeEEEEEcC
Confidence            33456777788899999999999999999998777789999997543 34567999999999999  9999999999866


Q ss_pred             CCCcccchhhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhcc
Q 039630          104 GPSRILAPLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEI  170 (174)
Q Consensus       104 ~~~~~lv~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  170 (174)
                       +..++++  ++.+++.|...+..              .....+++..+..++.|++.||+|||++.
T Consensus       251 -~~~~iv~--e~~~~gsL~~~l~~--------------~~~~~~~~~~~~~i~~qi~~~l~~LH~~~  300 (452)
T 1fmk_A          251 -EPIYIVT--EYMSKGSLLDFLKG--------------ETGKYLRLPQLVDMAAQIASGMAYVERMN  300 (452)
T ss_dssp             -SSCEEEE--CCCTTCBHHHHHSH--------------HHHTTCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             -CceEEEe--hhhcCCCHHHHHHh--------------cCCCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence             6677777  77777766654311              11224788899999999999999999863

>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*

Probab=99.69  E-value=1.1e-16  Score=113.25  Aligned_cols=122  Identities=25%  Similarity=0.371  Sum_probs=99.4

Q ss_pred             HHhhcCCeeecceecccCCeeEEEEEEcCCCEEEEEEeeccCccchhHHHHHHHHHhcccccCCCeeeeecceecCCCcc
Q 039630           29 LKIATNGFRTSNKIGEGGFGSVYKGRLEDGTVVAVNVLSVESKQGETEFMSEVASMANINICHENLVKLHGGCIDGPSRI  108 (174)
Q Consensus        29 ~~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~avK~~~~~~~~~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~~~~~~~  108 (174)
                      |....++|+..+.||+|+||.||++...++..+|+|.++... ...+.+.+|+.++..++  ||||+++++.+...+..+
T Consensus         3 ~~i~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vaiK~~~~~~-~~~~~~~~e~~~l~~l~--h~~i~~~~~~~~~~~~~~   79 (267)
T 3t9t_A            3 WVIDPSELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGA-MSEEDFIEEAEVMMKLS--HPKLVQLYGVCLEQAPIC   79 (267)
T ss_dssp             CBCCGGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTTT-BCHHHHHHHHHHHHTCC--CTTBCCEEEEECSSSSCE
T ss_pred             eEEchhheeeeeEecCCCceeEEEEEecCCCeEEEEEccccC-CCHHHHHHHHHHHHhCC--CCCEeeEEEEEccCCCeE
Confidence            444557899999999999999999998778899999997543 34567899999999999  999999999999888888


Q ss_pred             cchhhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhcc
Q 039630          109 LAPLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEI  170 (174)
Q Consensus       109 lv~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  170 (174)
                      +++  ++.+++.+...+.               .....+++..+..++.|++.||.|||++.
T Consensus        80 lv~--e~~~~~~L~~~~~---------------~~~~~~~~~~~~~~~~~i~~~l~~lH~~~  124 (267)
T 3t9t_A           80 LVT--EFMEHGCLSDYLR---------------TQRGLFAAETLLGMCLDVCEGMAYLEEAC  124 (267)
T ss_dssp             EEE--CCCTTCBHHHHHH---------------HTTTCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             EEE--eCCCCCcHHHHHh---------------hCcccCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            888  7766666654331               11234788899999999999999999864

>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens}

Probab=99.69  E-value=2.7e-17  Score=123.57  Aligned_cols=125  Identities=19%  Similarity=0.181  Sum_probs=101.3

Q ss_pred             hhhHHhhcCCeeecceecccCCeeEEEEEE-cCCCEEEEEEeeccC---ccchhHHHHHHHHHhcccccCCCeeeeecce
Q 039630           26 YNELKIATNGFRTSNKIGEGGFGSVYKGRL-EDGTVVAVNVLSVES---KQGETEFMSEVASMANINICHENLVKLHGGC  101 (174)
Q Consensus        26 ~~~~~~~~~~~~~~~~lg~G~~g~V~~~~~-~~~~~~avK~~~~~~---~~~~~~~~~e~~~l~~l~~~h~~i~~~~~~~  101 (174)
                      .+++....++|.+.+.||+|+||.||++.. .+++.||+|+++...   ......+..|..++..++  |+||+++++++
T Consensus        53 ~~~~~~~~~~f~~~~~lG~G~fG~V~~~~~~~~~~~vAiK~l~k~~~~~~~~~~~~~~E~~il~~~~--hp~Iv~l~~~~  130 (412)
T 2vd5_A           53 LKEVRLQRDDFEILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSCFREERDVLVNGD--RRWITQLHFAF  130 (412)
T ss_dssp             HHHHSCCGGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHHGGGCCHHHHHHHHHHSC--TTTBCCEEEEE
T ss_pred             hhhccCChhhEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhcC--CCCeeeEEEEE
Confidence            345555667899999999999999999994 578999999997531   233456889999999998  99999999999


Q ss_pred             ecCCCcccchhhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhc
Q 039630          102 IDGPSRILAPLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEE  169 (174)
Q Consensus       102 ~~~~~~~lv~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~  169 (174)
                      .+.+..++|+  ++.+++.|...+..               ....+++..+..++.||+.||+|||++
T Consensus       131 ~~~~~~~lVm--E~~~gg~L~~~l~~---------------~~~~l~~~~~~~~~~qi~~aL~~LH~~  181 (412)
T 2vd5_A          131 QDENYLYLVM--EYYVGGDLLTLLSK---------------FGERIPAEMARFYLAEIVMAIDSVHRL  181 (412)
T ss_dssp             ECSSEEEEEE--CCCCSCBHHHHHHH---------------HSSCCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             eeCCEEEEEE--cCCCCCcHHHHHHh---------------cCCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence            9998888888  77777777664421               112478899999999999999999975

>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A

Probab=99.69  E-value=1.5e-16  Score=114.16  Aligned_cols=117  Identities=18%  Similarity=0.308  Sum_probs=93.6

Q ss_pred             CCeeecceecccCCeeEEEEE-EcCCCEEEEEEeeccC--ccchhHHHHHHHHHhcccccCCCeeeeecceecCCCcccc
Q 039630           34 NGFRTSNKIGEGGFGSVYKGR-LEDGTVVAVNVLSVES--KQGETEFMSEVASMANINICHENLVKLHGGCIDGPSRILA  110 (174)
Q Consensus        34 ~~~~~~~~lg~G~~g~V~~~~-~~~~~~~avK~~~~~~--~~~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~~~~~~~lv  110 (174)
                      ++|++.+.||+|+||.||++. ..+++.||+|+++...  ......+.+|+.+++.++  |+||+++++++...+..+++
T Consensus         2 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~--h~~iv~~~~~~~~~~~~~lv   79 (292)
T 3o0g_A            2 QKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELK--HKNIVRLHDVLHSDKKLTLV   79 (292)
T ss_dssp             CSEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEESSCSSTTHHHHHHHHHHHHTTCC--CTTBCCEEEEEEETTEEEEE
T ss_pred             CCceeeeEecCCCCeEEEEEEECCCCceEEEEeeeccCCcCCcchHHHHHHHHHhcCC--CCCEeeEEeEEEeCCEEEEE
Confidence            468999999999999999999 4578999999997553  233467889999999999  99999999999999888888


Q ss_pred             hhhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhcc
Q 039630          111 PLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEI  170 (174)
Q Consensus       111 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  170 (174)
                      +  ++.++..+ ..+.               .....+++..+..++.|++.||+|||++.
T Consensus        80 ~--e~~~~~l~-~~~~---------------~~~~~l~~~~~~~~~~ql~~~l~~lH~~~  121 (292)
T 3o0g_A           80 F--EFCDQDLK-KYFD---------------SCNGDLDPEIVKSFLFQLLKGLGFCHSRN  121 (292)
T ss_dssp             E--ECCSEEHH-HHHH---------------HTTTCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             E--ecCCCCHH-HHHH---------------hCCCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            8  55554322 2121               11235789999999999999999999863

>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ...

Probab=99.69  E-value=4.4e-17  Score=121.00  Aligned_cols=120  Identities=25%  Similarity=0.432  Sum_probs=96.8

Q ss_pred             hcCCeeecceecccCCeeEEEEEEc----CCCEEEEEEeecc-CccchhHHHHHHHHHhcccccCCCeeeeecceecCCC
Q 039630           32 ATNGFRTSNKIGEGGFGSVYKGRLE----DGTVVAVNVLSVE-SKQGETEFMSEVASMANINICHENLVKLHGGCIDGPS  106 (174)
Q Consensus        32 ~~~~~~~~~~lg~G~~g~V~~~~~~----~~~~~avK~~~~~-~~~~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~~~~~  106 (174)
                      ..++|.+.+.||+|+||.||+|...    ++..||+|.++.. .......+.+|+.++.+++  |+||+++++++...+.
T Consensus        43 ~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~--h~niv~~~~~~~~~~~  120 (373)
T 2qol_A           43 DATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFD--HPNIIRLEGVVTKSKP  120 (373)
T ss_dssp             CGGGCCCCEEEEECSSSEEEEC-CBCTTSCBCCEEEEECCTTCCHHHHHHHHHHHHHHTTCC--CTTBCCEEEEECSSSS
T ss_pred             CHhhceeeeEEeeCCCeEEEEEEEecCCCCceeEEEEEecCccCHHHHHHHHHHHHHHHhCC--CCCCCeEEEEEeeCCc
Confidence            3457899999999999999999843    5678999999755 2334567999999999999  9999999999998888


Q ss_pred             cccchhhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhcc
Q 039630          107 RILAPLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEI  170 (174)
Q Consensus       107 ~~lv~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  170 (174)
                      .++++  ++.+++.|...+.               .....+++..++.++.|++.||.|||++.
T Consensus       121 ~~lv~--e~~~~~sL~~~l~---------------~~~~~~~~~~~~~i~~qi~~aL~~LH~~~  167 (373)
T 2qol_A          121 VMIVT--EYMENGSLDSFLR---------------KHDAQFTVIQLVGMLRGIASGMKYLSDMG  167 (373)
T ss_dssp             CEEEE--ECCTTCBHHHHHH---------------TTTTCSCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             eEEEE--eCCCCCcHHHHHH---------------hCCCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            88888  7777777665431               12235788999999999999999999863

>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A

Probab=99.69  E-value=9.2e-17  Score=118.75  Aligned_cols=117  Identities=17%  Similarity=0.233  Sum_probs=96.9

Q ss_pred             cCCeeecceecccCCeeEEEEE-EcCCCEEEEEEeeccCccchhHHHHHHHHHhcccccCCCeeeeecceecCCCcccch
Q 039630           33 TNGFRTSNKIGEGGFGSVYKGR-LEDGTVVAVNVLSVESKQGETEFMSEVASMANINICHENLVKLHGGCIDGPSRILAP  111 (174)
Q Consensus        33 ~~~~~~~~~lg~G~~g~V~~~~-~~~~~~~avK~~~~~~~~~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~~~~~~~lv~  111 (174)
                      .++|.+.+.||+|+||.||++. ..+++.||+|++.... .....+.+|+.+++.++  ||||+++++++...+..++++
T Consensus        19 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~--hpniv~~~~~~~~~~~~~lv~   95 (361)
T 3uc3_A           19 SDRYDFVKDIGSGNFGVARLMRDKLTKELVAVKYIERGA-AIDENVQREIINHRSLR--HPNIVRFKEVILTPTHLAIIM   95 (361)
T ss_dssp             TTTEEEEEEESSSTTSSEEEEEETTTCCEEEEEEEESST-TSCHHHHHHHHHHHHCC--CTTBCCEEEEEECSSEEEEEE
T ss_pred             CCcEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEecCc-cccHHHHHHHHHHHhCC--CCCCCcEEEEEeeCCEEEEEE
Confidence            4679999999999999999999 4578999999997542 33456889999999999  999999999999998888888


Q ss_pred             hhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhcc
Q 039630          112 LQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEI  170 (174)
Q Consensus       112 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  170 (174)
                        ++..++.+...+.                ....+++..+..++.|++.||.|||++.
T Consensus        96 --e~~~~~~L~~~l~----------------~~~~~~~~~~~~i~~ql~~~L~~LH~~~  136 (361)
T 3uc3_A           96 --EYASGGELYERIC----------------NAGRFSEDEARFFFQQLLSGVSYCHSMQ  136 (361)
T ss_dssp             --ECCCSCBHHHHHH----------------HHSSCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             --EeCCCCCHHHHHH----------------hcCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence              7776666655332                1224789999999999999999999864

>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7

Probab=99.69  E-value=1.3e-16  Score=123.62  Aligned_cols=127  Identities=23%  Similarity=0.332  Sum_probs=102.2

Q ss_pred             echhhHHhhcCCeeecceecccCCeeEEEEEEcCCCEEEEEEeeccCccchhHHHHHHHHHhcccccCCCeeeeecceec
Q 039630           24 ISYNELKIATNGFRTSNKIGEGGFGSVYKGRLEDGTVVAVNVLSVESKQGETEFMSEVASMANINICHENLVKLHGGCID  103 (174)
Q Consensus        24 ~~~~~~~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~avK~~~~~~~~~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~~  103 (174)
                      +....|.+..++|++.+.||+|+||.||+|....+..||||+++... ...+.+.+|+.+++.++  |+||+++++++..
T Consensus       257 ~~~~~~~i~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~--hpniv~~~~~~~~  333 (535)
T 2h8h_A          257 LAKDAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLR--HEKLVQLYAVVSE  333 (535)
T ss_dssp             SSTTCSBCCGGGEEEEEEEEECSSEEEEEEEETTTEEEEEEEECTTS-SCHHHHHHHHHHHHHCC--CTTBCCEEEEECS
T ss_pred             cCccceecchhhhhhheecccCCCeEEEEEEECCCceEEEEEeCCCC-CCHHHHHHHHHHHHhCC--CCCEeeEEEEEee
Confidence            34556777788899999999999999999998777889999997543 34567999999999999  9999999999866


Q ss_pred             CCCcccchhhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhcc
Q 039630          104 GPSRILAPLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEI  170 (174)
Q Consensus       104 ~~~~~lv~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  170 (174)
                       +..++|+  ++..++.|...+..              .....+++..++.++.||+.||.|||++.
T Consensus       334 -~~~~lv~--e~~~~gsL~~~l~~--------------~~~~~l~~~~~~~i~~qi~~~L~~LH~~~  383 (535)
T 2h8h_A          334 -EPIYIVT--EYMSKGSLLDFLKG--------------ETGKYLRLPQLVDMAAQIASGMAYVERMN  383 (535)
T ss_dssp             -SSCEEEE--CCCTTEEHHHHHSH--------------HHHTTCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             -ccceEee--ehhcCCcHHHHHhh--------------cCCCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence             6677777  77777776654311              11124788899999999999999999863

>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7

Probab=99.69  E-value=7.7e-17  Score=117.27  Aligned_cols=117  Identities=22%  Similarity=0.284  Sum_probs=96.6

Q ss_pred             CCeeecceecccCCeeEEEEE-EcCCCEEEEEEeeccC---ccchhHHHHHHHHHhcccccCCCeeeeecceecCCCccc
Q 039630           34 NGFRTSNKIGEGGFGSVYKGR-LEDGTVVAVNVLSVES---KQGETEFMSEVASMANINICHENLVKLHGGCIDGPSRIL  109 (174)
Q Consensus        34 ~~~~~~~~lg~G~~g~V~~~~-~~~~~~~avK~~~~~~---~~~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~~~~~~~l  109 (174)
                      ++|++.+.||+|+||.||++. ..+++.+|+|+++...   ......+.+|+.++..++  ||||+++++.+.+.+..++
T Consensus         6 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~--hp~Iv~~~~~~~~~~~~~l   83 (318)
T 1fot_A            6 QDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVT--HPFIIRMWGTFQDAQQIFM   83 (318)
T ss_dssp             GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCC--BTTBCCEEEEEECSSEEEE
T ss_pred             HHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhhCC--CCCCceEeEEEEeCCEEEE
Confidence            568999999999999999999 4578999999997542   234567888999999998  9999999999999888888


Q ss_pred             chhhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhcc
Q 039630          110 APLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEI  170 (174)
Q Consensus       110 v~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  170 (174)
                      ++  ++.+++.+...+.                ....+++..+..++.|++.||.|||++.
T Consensus        84 v~--e~~~gg~L~~~l~----------------~~~~~~~~~~~~~~~qi~~aL~~LH~~~  126 (318)
T 1fot_A           84 IM--DYIEGGELFSLLR----------------KSQRFPNPVAKFYAAEVCLALEYLHSKD  126 (318)
T ss_dssp             EE--CCCCSCBHHHHHH----------------HTSSCCHHHHHHHHHHHHHHHHHHHTTT
T ss_pred             EE--eCCCCCCHHHHHH----------------HcCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            88  7777776665431                1234788899999999999999999753

>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens}

Probab=99.69  E-value=6.7e-17  Score=120.01  Aligned_cols=114  Identities=18%  Similarity=0.318  Sum_probs=89.0

Q ss_pred             ecceecccCCeeEEEEE-EcCCCEEEEEEeeccCccchhHHHHHHHHHhcccccCCCeeeeecceecCCCcccchhhhhh
Q 039630           38 TSNKIGEGGFGSVYKGR-LEDGTVVAVNVLSVESKQGETEFMSEVASMANINICHENLVKLHGGCIDGPSRILAPLQASI  116 (174)
Q Consensus        38 ~~~~lg~G~~g~V~~~~-~~~~~~~avK~~~~~~~~~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~~~~~~~lv~~~~~~  116 (174)
                      ..+.||+|+||.||+|. ..++..||+|+++.........+.+|+.++..++  |+||+++++++...+..++++  ++.
T Consensus        93 ~~~~lG~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~--hpnIv~~~~~~~~~~~~~lv~--E~~  168 (373)
T 2x4f_A           93 KTEILGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKEEVKNEISVMNQLD--HANLIQLYDAFESKNDIVLVM--EYV  168 (373)
T ss_dssp             EEEECC-----CEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCC--CTTBCCEEEEEECSSEEEEEE--ECC
T ss_pred             cceEEecCcCEEEEEEEEcCCCcEEEEEEEcccccccHHHHHHHHHHHHhCC--CCCCCeEEEEEEECCEEEEEE--eCC
Confidence            36789999999999998 4578999999998665556678999999999999  999999999999988888888  777


Q ss_pred             hhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhcc
Q 039630          117 EALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEI  170 (174)
Q Consensus       117 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  170 (174)
                      +++.+...+.               .....+++..+..++.|++.||.|||++.
T Consensus       169 ~~~~L~~~l~---------------~~~~~l~~~~~~~i~~qi~~aL~~LH~~~  207 (373)
T 2x4f_A          169 DGGELFDRII---------------DESYNLTELDTILFMKQICEGIRHMHQMY  207 (373)
T ss_dssp             TTCEEHHHHH---------------HTGGGCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             CCCcHHHHHH---------------hcCCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            6666654331               12234788899999999999999999853

>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A*

Probab=99.69  E-value=1e-16  Score=113.56  Aligned_cols=119  Identities=24%  Similarity=0.383  Sum_probs=95.9

Q ss_pred             cCCeeecceecccCCeeEEEEEEcCCCEEEEEEeeccC--ccchhHHHHHHHHHhcccccCCCeeeeecceecC--CCcc
Q 039630           33 TNGFRTSNKIGEGGFGSVYKGRLEDGTVVAVNVLSVES--KQGETEFMSEVASMANINICHENLVKLHGGCIDG--PSRI  108 (174)
Q Consensus        33 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~avK~~~~~~--~~~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~~~--~~~~  108 (174)
                      .++|.+.+.||+|+||.||++... +..+|+|+++...  ......+.+|+.++..++  ||||+++++++...  +..+
T Consensus         9 ~~~y~~~~~lg~G~~g~V~~~~~~-~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~--h~~iv~~~~~~~~~~~~~~~   85 (271)
T 3kmu_A            9 FKQLNFLTKLNENHSGELWKGRWQ-GNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFS--HPNVLPVLGACQSPPAPHPT   85 (271)
T ss_dssp             GGGCEEEEEEEEETTEEEEEEEET-TEEEEEEEECCTTCCHHHHHHHHHHGGGGCCCS--CTTEECEEEEECTTTSSSCE
T ss_pred             HHHhHHHHHhcCCCcceEEEEEEC-CeeEEEEEecccccCHHHHHHHHHHHHHHHhcC--CCchhheEEEEccCCCCCeE
Confidence            357889999999999999999875 8889999997653  334567899999999998  99999999999877  5667


Q ss_pred             cchhhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhcc
Q 039630          109 LAPLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEI  170 (174)
Q Consensus       109 lv~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  170 (174)
                      +++  ++.+++.|...+..              .....+++..+..++.|++.||.|||++.
T Consensus        86 lv~--e~~~~~~L~~~l~~--------------~~~~~~~~~~~~~i~~qi~~~l~~lH~~~  131 (271)
T 3kmu_A           86 LIT--HWMPYGSLYNVLHE--------------GTNFVVDQSQAVKFALDMARGMAFLHTLE  131 (271)
T ss_dssp             EEE--ECCTTCBHHHHHHS--------------CSSCCCCHHHHHHHHHHHHHHHHHHTTSS
T ss_pred             eee--cccCCCcHHHHHhh--------------cccCCCCHHHHHHHHHHHHHHHHHHhcCC
Confidence            777  77777776654421              11224789999999999999999999865

>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II}

Probab=99.68  E-value=3.1e-17  Score=120.21  Aligned_cols=135  Identities=18%  Similarity=0.178  Sum_probs=96.5

Q ss_pred             hcCCeeecceecccCCeeEEEEE-EcCCCEEEEEEeecc-----CccchhHHHHHHHHHhcccccCCCeeeeecceecCC
Q 039630           32 ATNGFRTSNKIGEGGFGSVYKGR-LEDGTVVAVNVLSVE-----SKQGETEFMSEVASMANINICHENLVKLHGGCIDGP  105 (174)
Q Consensus        32 ~~~~~~~~~~lg~G~~g~V~~~~-~~~~~~~avK~~~~~-----~~~~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~~~~  105 (174)
                      ..++|++.+.||+|+||.||++. ..++..+|+|++...     .......+.+|+.+++.++  ||||+++++++...+
T Consensus        24 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~--hpniv~~~~~~~~~~  101 (345)
T 3hko_A           24 LQKKYHLKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKLH--HPNIARLYEVYEDEQ  101 (345)
T ss_dssp             HHHHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHC---CHHHHHHHHHHHHHHCC--CTTBCCEEEEEECSS
T ss_pred             hhhheeecceeeecCCeEEEEEEECCCCceEEEeehhhhhhcccCHHHHHHHHHHHHHHHhCC--CCCcceeehhhccCC
Confidence            34569999999999999999998 467889999999754     2344567899999999999  999999999999988


Q ss_pred             Ccccchhhhhhhhhhhhhhhhccc----ceeeeeeecC--------------------CCCCcccCCHHHHHHHHHHHHH
Q 039630          106 SRILAPLQASIEALFLFTKLWKMD----KFISIYVVSG--------------------SKKNRVKFNWIARREIALGIAR  161 (174)
Q Consensus       106 ~~~lv~~~~~~~~~~l~~~~~~~~----~~~~~~~~~~--------------------~~~~~~~~~~~~~~~~~~qi~~  161 (174)
                      ..++++  ++.+++.+...+....    ..........                    .......+++..+..++.|++.
T Consensus       102 ~~~lv~--e~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~  179 (345)
T 3hko_A          102 YICLVM--ELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNEEAINGSIHGFRESLDFVQREKLISNIMRQIFS  179 (345)
T ss_dssp             EEEEEE--ECCCSCBHHHHEEEEEETTTTEEEEEEECCCCCCSHHHHHHHHHSCC--CEEECCHHHHHHHHHHHHHHHHH
T ss_pred             eEEEEE--eCCCCCcHHHHHHHhhcccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHH
Confidence            888888  7777776665432100    0000000000                    0001123457778889999999


Q ss_pred             HHHHhhhcc
Q 039630          162 GLAYIHEEI  170 (174)
Q Consensus       162 gl~yLH~~~  170 (174)
                      ||+|||++.
T Consensus       180 ~l~~LH~~~  188 (345)
T 3hko_A          180 ALHYLHNQG  188 (345)
T ss_dssp             HHHHHHHTT
T ss_pred             HHHHHHHCC
Confidence            999999863

>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A*

Probab=99.68  E-value=4.2e-16  Score=112.44  Aligned_cols=134  Identities=37%  Similarity=0.549  Sum_probs=105.1

Q ss_pred             cccceechhhHHhhcCCeeec------ceecccCCeeEEEEEEcCCCEEEEEEeeccC----ccchhHHHHHHHHHhccc
Q 039630           19 YKFSKISYNELKIATNGFRTS------NKIGEGGFGSVYKGRLEDGTVVAVNVLSVES----KQGETEFMSEVASMANIN   88 (174)
Q Consensus        19 ~~~~~~~~~~~~~~~~~~~~~------~~lg~G~~g~V~~~~~~~~~~~avK~~~~~~----~~~~~~~~~e~~~l~~l~   88 (174)
                      .....++++++...+++|...      +.||+|+||.||+|.. ++..+|+|.+....    ......+.+|+.+++.++
T Consensus        10 ~~~~~~~~~~l~~~~~~f~~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~   88 (307)
T 2nru_A           10 TRFHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQ   88 (307)
T ss_dssp             -CCEECCHHHHHHHTTTTCCSBTTTTCCEEEECSSEEEEEEES-SSCEEEEEEECCCTTSCTTTHHHHHHHHHHHHHHCC
T ss_pred             CCCCcccHHHHHHHHcccccccccccCCccccCCCeEEEEEEE-CCceEEEEEEecccCcchHHHHHHHHHHHHHHHhcC
Confidence            345678888888877776655      8999999999999986 57899999997542    233567899999999999


Q ss_pred             ccCCCeeeeecceecCCCcccchhhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhh
Q 039630           89 ICHENLVKLHGGCIDGPSRILAPLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHE  168 (174)
Q Consensus        89 ~~h~~i~~~~~~~~~~~~~~lv~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~  168 (174)
                        ||||+++++++...+..++++  ++.+++.+...+..             ......+++..++.++.|++.||.|||+
T Consensus        89 --h~~i~~~~~~~~~~~~~~lv~--e~~~~~~L~~~l~~-------------~~~~~~~~~~~~~~i~~~i~~~l~~lH~  151 (307)
T 2nru_A           89 --HENLVELLGFSSDGDDLCLVY--VYMPNGSLLDRLSC-------------LDGTPPLSWHMRCKIAQGAANGINFLHE  151 (307)
T ss_dssp             --CTTBCCEEEEECSSSSCEEEE--ECCTTCBHHHHHHT-------------GGGCCCCCHHHHHHHHHHHHHHHHHHHH
T ss_pred             --CCCeEEEEEEEecCCceEEEE--EecCCCcHHHHHHh-------------ccCCCCCCHHHHHHHHHHHHHHHHHHhc
Confidence              999999999999988888888  76666666553311             1122357899999999999999999998


Q ss_pred             cc
Q 039630          169 EI  170 (174)
Q Consensus       169 ~~  170 (174)
                      +.
T Consensus       152 ~~  153 (307)
T 2nru_A          152 NH  153 (307)
T ss_dssp             TT
T ss_pred             CC
Confidence            63

>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A*

Probab=99.68  E-value=1.7e-16  Score=114.25  Aligned_cols=120  Identities=18%  Similarity=0.295  Sum_probs=95.6

Q ss_pred             hcCCeeecceecccCCeeEEEEEE-cCCCEEEEEEeeccCccchhHHHHHHHHHhcccccCCCeeeeecceecCCCcccc
Q 039630           32 ATNGFRTSNKIGEGGFGSVYKGRL-EDGTVVAVNVLSVESKQGETEFMSEVASMANINICHENLVKLHGGCIDGPSRILA  110 (174)
Q Consensus        32 ~~~~~~~~~~lg~G~~g~V~~~~~-~~~~~~avK~~~~~~~~~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~~~~~~~lv  110 (174)
                      ..+.|++.+.||+|+||.||++.. .++..+|+|++..........+.+|+.++..++  ||||+++++.+...+..+++
T Consensus        17 ~~~~y~i~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~e~~~l~~l~--h~~i~~~~~~~~~~~~~~lv   94 (302)
T 2j7t_A           17 PNEVWEIVGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCD--HPYIVKLLGAYYHDGKLWIM   94 (302)
T ss_dssp             GGGTEEEEEEEECSTTCCEEEEEETTTCCEEEEEEEC----CCHHHHHHHHHHHHHCC--CTTBCCEEEEEECC-CEEEE
T ss_pred             CccceeecceeccCCCeEEEEEEEcCCCcEEEEEEecCCCHHHHHHHHHHHHHHhcCC--CCCEeeeeeeeeeCCeEEEE
Confidence            446799999999999999999995 468899999998666666778999999999998  99999999999998888888


Q ss_pred             hhhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhcc
Q 039630          111 PLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEI  170 (174)
Q Consensus       111 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  170 (174)
                      +  ++.+++.+...+..               ....+++..+..++.|++.||.|||++.
T Consensus        95 ~--e~~~~~~l~~~~~~---------------~~~~~~~~~~~~~~~~i~~~l~~lH~~~  137 (302)
T 2j7t_A           95 I--EFCPGGAVDAIMLE---------------LDRGLTEPQIQVVCRQMLEALNFLHSKR  137 (302)
T ss_dssp             E--ECCTTEEHHHHHHH---------------HTSCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             E--EeCCCCcHHHHHHh---------------hccCCCHHHHHHHHHHHHHHHHHHhcCC
Confidence            8  66666655442211               1224788999999999999999999864

>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A

Probab=99.68  E-value=6.2e-17  Score=119.22  Aligned_cols=121  Identities=17%  Similarity=0.199  Sum_probs=96.8

Q ss_pred             CCeeecceecccCCeeEEEEE-EcCCCEEEEEEeeccC-----ccchhHHHHHHHHHhcccccCCCeeeeecceecCCCc
Q 039630           34 NGFRTSNKIGEGGFGSVYKGR-LEDGTVVAVNVLSVES-----KQGETEFMSEVASMANINICHENLVKLHGGCIDGPSR  107 (174)
Q Consensus        34 ~~~~~~~~lg~G~~g~V~~~~-~~~~~~~avK~~~~~~-----~~~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~~~~~~  107 (174)
                      +.|++.+.||+|+||.||+|. ..+++.||+|+++...     ....+.+.+|+.++..++  ||||+++++.+...+..
T Consensus        24 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~--hpnIv~~~~~~~~~~~~  101 (351)
T 3c0i_A           24 DVYELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLK--HPHIVELLETYSSDGML  101 (351)
T ss_dssp             HHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHTSSSCCHHHHHHHHHHHHHCC--CTTBCCEEEEEEETTEE
T ss_pred             cceEEeeEEeeCCCEEEEEEEECCCCCEEEEEEEEhhhccccccchHHHHHHHHHHHHhCC--CCCCCcEEEEEEeCCEE
Confidence            469999999999999999998 4578999999996431     224667899999999999  99999999999999888


Q ss_pred             ccchhhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhcc
Q 039630          108 ILAPLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEI  170 (174)
Q Consensus       108 ~lv~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  170 (174)
                      ++++  ++.+++.+...+...            ......+++..+..++.|++.||.|||++.
T Consensus       102 ~lv~--e~~~g~~L~~~l~~~------------~~~~~~~~~~~~~~i~~qi~~al~~lH~~~  150 (351)
T 3c0i_A          102 YMVF--EFMDGADLCFEIVKR------------ADAGFVYSEAVASHYMRQILEALRYCHDNN  150 (351)
T ss_dssp             EEEE--ECCSSCBHHHHHHHH------------HHTTCCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             EEEE--eCCCCCCHHHHHHHh------------cccCCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            8888  777766665433211            011224788999999999999999999863

>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ...

Probab=99.68  E-value=9.3e-17  Score=114.88  Aligned_cols=125  Identities=26%  Similarity=0.396  Sum_probs=101.8

Q ss_pred             hhHHhhcCCeeecceecccCCeeEEEEEE-cCCCEEEEEEeeccCccchhHHHHHHHHHhcccccCCCeeeeecceecCC
Q 039630           27 NELKIATNGFRTSNKIGEGGFGSVYKGRL-EDGTVVAVNVLSVESKQGETEFMSEVASMANINICHENLVKLHGGCIDGP  105 (174)
Q Consensus        27 ~~~~~~~~~~~~~~~lg~G~~g~V~~~~~-~~~~~~avK~~~~~~~~~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~~~~  105 (174)
                      +.|....++|.+.+.||+|+||.||++.. .++..+|+|.++.. ......+.+|+.+++.++  |+||+++++.+...+
T Consensus         6 ~~~~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~E~~~l~~l~--h~~i~~~~~~~~~~~   82 (288)
T 3kfa_A            6 DKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKED-TMEVEEFLKEAAVMKEIK--HPNLVQLLGVCTREP   82 (288)
T ss_dssp             CTTBCCGGGEEEEEESGGGTTCSEEEEEEGGGTEEEEEEEECSC-STHHHHHHHHHHHHHHCC--CTTBCCEEEEECSSS
T ss_pred             hcccccccceeEEeecCCCCceeEEEeEecCCCEEEEEEecCcC-HHHHHHHHHHHHHHHhCC--CCCEeeEEEEEccCC
Confidence            45666778899999999999999999994 45889999999744 344567899999999999  999999999999988


Q ss_pred             CcccchhhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhcc
Q 039630          106 SRILAPLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEI  170 (174)
Q Consensus       106 ~~~lv~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  170 (174)
                      ..++++  ++.+++.+...+..              .....+++..+..++.|++.||.|||++.
T Consensus        83 ~~~~v~--e~~~~~~L~~~~~~--------------~~~~~~~~~~~~~i~~~i~~~l~~lH~~~  131 (288)
T 3kfa_A           83 PFYIIT--EFMTYGNLLDYLRE--------------CNRQEVSAVVLLYMATQISSAMEYLEKKN  131 (288)
T ss_dssp             SEEEEE--ECCTTEEHHHHHHH--------------CCTTTSCHHHHHHHHHHHHHHHHHHHHHT
T ss_pred             CEEEEE--EcCCCCcHHHHHHh--------------cccCCccHhHHHHHHHHHHHHHHHHHHCC
Confidence            888888  77766666554321              12234788999999999999999999864

>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens}

Probab=99.68  E-value=2.8e-16  Score=114.15  Aligned_cols=120  Identities=21%  Similarity=0.238  Sum_probs=94.7

Q ss_pred             CCeeecceecccCCeeEEEEEE-cCCCEEEEEEeeccC-ccchhHHHHHHHHHhcccccCCCeeeeecceecCC--Cccc
Q 039630           34 NGFRTSNKIGEGGFGSVYKGRL-EDGTVVAVNVLSVES-KQGETEFMSEVASMANINICHENLVKLHGGCIDGP--SRIL  109 (174)
Q Consensus        34 ~~~~~~~~lg~G~~g~V~~~~~-~~~~~~avK~~~~~~-~~~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~~~~--~~~l  109 (174)
                      +.|.+.+.||+|+||.||+|.. .+++.||+|+++... ......+.+|+.+++.++  |+||+++++++...+  ..++
T Consensus         9 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~--h~~iv~~~~~~~~~~~~~~~l   86 (319)
T 4euu_A            9 HLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLN--HKNIVKLFAIEEETTTRHKVL   86 (319)
T ss_dssp             EEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCC--CTTBCCEEEEEECTTTCCEEE
T ss_pred             CCEEEEEEecCCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhcC--CCCcceEEEEeecCCCceEEE
Confidence            5699999999999999999994 568999999997543 344667889999999999  999999999987765  4566


Q ss_pred             chhhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhcc
Q 039630          110 APLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEI  170 (174)
Q Consensus       110 v~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  170 (174)
                      ++  ++.+++.+...+...             .....+++..+..++.|++.||+|||++.
T Consensus        87 v~--e~~~~~~L~~~l~~~-------------~~~~~~~~~~~~~i~~qi~~~L~~LH~~~  132 (319)
T 4euu_A           87 IM--EFCPCGSLYTVLEEP-------------SNAYGLPESEFLIVLRDVVGGMNHLRENG  132 (319)
T ss_dssp             EE--ECCTTCBHHHHHHSG-------------GGTTCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             EE--eCCCCCCHHHHHHHh-------------ccccCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            66  777666665533211             11223789999999999999999999863

>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens}

Probab=99.68  E-value=1.6e-16  Score=114.31  Aligned_cols=117  Identities=21%  Similarity=0.231  Sum_probs=87.0

Q ss_pred             cCCeeecceecccCCeeEEEEE-EcCCCEEEEEEeeccCc--------------------------cchhHHHHHHHHHh
Q 039630           33 TNGFRTSNKIGEGGFGSVYKGR-LEDGTVVAVNVLSVESK--------------------------QGETEFMSEVASMA   85 (174)
Q Consensus        33 ~~~~~~~~~lg~G~~g~V~~~~-~~~~~~~avK~~~~~~~--------------------------~~~~~~~~e~~~l~   85 (174)
                      .++|.+.+.||+|+||.||++. ..++..||+|++.....                          .....+.+|+.+++
T Consensus        12 ~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~   91 (298)
T 2zv2_A           12 LNQYTLKDEIGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGGCIQPRGPIEQVYQEIAILK   91 (298)
T ss_dssp             ETTEEEEEEEEC--CCEEEEEEETTTTEEEEEEEEECC-------------------------------CHHHHHHHHHH
T ss_pred             ecceEEEeEEeecCCEEEEEEEECCCCcEEEEEEeehhhhhhhcccccccccccccccccccccccchHHHHHHHHHHHH
Confidence            3679999999999999999998 45788999999975421                          11356889999999


Q ss_pred             cccccCCCeeeeecceecC--CCcccchhhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHH
Q 039630           86 NINICHENLVKLHGGCIDG--PSRILAPLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGL  163 (174)
Q Consensus        86 ~l~~~h~~i~~~~~~~~~~--~~~~lv~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl  163 (174)
                      .++  ||||+++++.+...  +..++++  ++.+++.+..                 ......+++..+..++.|++.||
T Consensus        92 ~l~--h~~iv~~~~~~~~~~~~~~~lv~--e~~~~~~l~~-----------------~~~~~~~~~~~~~~~~~qi~~~l  150 (298)
T 2zv2_A           92 KLD--HPNVVKLVEVLDDPNEDHLYMVF--ELVNQGPVME-----------------VPTLKPLSEDQARFYFQDLIKGI  150 (298)
T ss_dssp             TCC--CTTBCCEEEEEECSSSSEEEEEE--ECCTTCBSCC-----------------SSCSSCCCHHHHHHHHHHHHHHH
T ss_pred             hCC--CCCCCeEEEEEEcCCCCEEEEEE--ecCCCCcHHH-----------------HhhcCCCCHHHHHHHHHHHHHHH
Confidence            999  99999999999763  4455555  5544443322                 11223588999999999999999


Q ss_pred             HHhhhcc
Q 039630          164 AYIHEEI  170 (174)
Q Consensus       164 ~yLH~~~  170 (174)
                      +|||++.
T Consensus       151 ~~lH~~~  157 (298)
T 2zv2_A          151 EYLHYQK  157 (298)
T ss_dssp             HHHHHTT
T ss_pred             HHHHHCC
Confidence            9999863

>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus}

Probab=99.68  E-value=1.5e-16  Score=121.42  Aligned_cols=117  Identities=19%  Similarity=0.274  Sum_probs=97.6

Q ss_pred             CCeeecceecccCCeeEEEEE-EcCCCEEEEEEeeccC---ccchhHHHHHHHHHhcccccCCCeeeeecceecCCCccc
Q 039630           34 NGFRTSNKIGEGGFGSVYKGR-LEDGTVVAVNVLSVES---KQGETEFMSEVASMANINICHENLVKLHGGCIDGPSRIL  109 (174)
Q Consensus        34 ~~~~~~~~lg~G~~g~V~~~~-~~~~~~~avK~~~~~~---~~~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~~~~~~~l  109 (174)
                      ++|.+.+.||+|+||.||+|. ..+|+.||+|+++...   ......+.+|+.+++.++  ||||+++++++...+..++
T Consensus        16 ~~Y~l~~~LG~G~fg~V~~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~Ei~~l~~l~--HpnIv~l~~~~~~~~~~~l   93 (476)
T 2y94_A           16 GHYILGDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFR--HPHIIKLYQVISTPSDIFM   93 (476)
T ss_dssp             TTEEEEEEEECCSSSCEEEEEETTTCCEEEEEEEEHHHHHHTTTHHHHHHHHHHHTTCC--CTTBCCEEEEEECSSEEEE
T ss_pred             cCEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhCC--CCCCCcEEEEEEECCEEEE
Confidence            579999999999999999999 4579999999997542   234567899999999999  9999999999999988888


Q ss_pred             chhhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhcc
Q 039630          110 APLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEI  170 (174)
Q Consensus       110 v~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  170 (174)
                      ++  ++.+++.+...+                .....+++..+..++.|++.||.|||++.
T Consensus        94 v~--E~~~gg~L~~~l----------------~~~~~l~~~~~~~i~~qi~~aL~~LH~~g  136 (476)
T 2y94_A           94 VM--EYVSGGELFDYI----------------CKNGRLDEKESRRLFQQILSGVDYCHRHM  136 (476)
T ss_dssp             EE--ECCSSEEHHHHT----------------TSSSSCCHHHHHHHHHHHHHHHHHHHTTT
T ss_pred             EE--eCCCCCcHHHHH----------------HhcCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            88  777777666533                12335889999999999999999999853

>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus}

Probab=99.68  E-value=2.2e-16  Score=114.86  Aligned_cols=70  Identities=23%  Similarity=0.512  Sum_probs=59.0

Q ss_pred             CCeeecceecccCCeeEEEEEE-cCCCEEEEEEeeccC-ccchhHHHHHHHHHhcccccCCCeeeeecceecCC
Q 039630           34 NGFRTSNKIGEGGFGSVYKGRL-EDGTVVAVNVLSVES-KQGETEFMSEVASMANINICHENLVKLHGGCIDGP  105 (174)
Q Consensus        34 ~~~~~~~~lg~G~~g~V~~~~~-~~~~~~avK~~~~~~-~~~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~~~~  105 (174)
                      ++|++.+.||+|+||.||+|.. .+++.||+|+++... ....+.+.+|+.+++.++  ||||+++++.+...+
T Consensus         6 ~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~--hpniv~~~~~~~~~~   77 (332)
T 3qd2_B            6 TDFEPIQCMGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLE--HPGIVRYFNAWLETP   77 (332)
T ss_dssp             HHEEEEEEEECC-CSEEEEEEETTTCCEEEEEEEECCSTTTHHHHHHHHHHHHTSCC--CTTBCCEEEEEEECC
T ss_pred             hcCceeeEecCCCCeEEEEEEEcCCCcEEEEEEeecCCchhHHHHHHHHHHHHHhCC--CCCEeeEEEEEEEec
Confidence            4689999999999999999995 478999999997553 334567999999999999  999999999986654

>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens}

Probab=99.68  E-value=9.7e-17  Score=118.12  Aligned_cols=117  Identities=18%  Similarity=0.248  Sum_probs=90.1

Q ss_pred             hcCCeeecceecccCCeeEEEEEE-cCCCEEEEEEeeccCccchhHHHHHHHHHhcccccCCCeeeeecceecCCCcccc
Q 039630           32 ATNGFRTSNKIGEGGFGSVYKGRL-EDGTVVAVNVLSVESKQGETEFMSEVASMANINICHENLVKLHGGCIDGPSRILA  110 (174)
Q Consensus        32 ~~~~~~~~~~lg~G~~g~V~~~~~-~~~~~~avK~~~~~~~~~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~~~~~~~lv  110 (174)
                      ..+.|.+.+.||+|+||.||+|.. .+++.||+|+++...  ..+.+.+|+.++..++  |+||+++++.+...+..+++
T Consensus        51 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~E~~~l~~l~--h~niv~~~~~~~~~~~~~lv  126 (349)
T 2w4o_A           51 LSDFFEVESELGRGATSIVYRCKQKGTQKPYALKVLKKTV--DKKIVRTEIGVLLRLS--HPNIIKLKEIFETPTEISLV  126 (349)
T ss_dssp             GGGTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEC------------CHHHHHCC--CTTBCCEEEEEECSSEEEEE
T ss_pred             ccCcEEEeeEEeeCCCEEEEEEEECCCCcEEEEEEeccch--hHHHHHHHHHHHHhCC--CCCCcceeeeEecCCeEEEE
Confidence            446799999999999999999995 468899999997542  3456788999999999  99999999999998888888


Q ss_pred             hhhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhcc
Q 039630          111 PLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEI  170 (174)
Q Consensus       111 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  170 (174)
                      +  ++.+++.+...+                .....+++..+..++.|++.||.|||++.
T Consensus       127 ~--e~~~~~~L~~~l----------------~~~~~~~~~~~~~i~~qi~~~L~~LH~~~  168 (349)
T 2w4o_A          127 L--ELVTGGELFDRI----------------VEKGYYSERDAADAVKQILEAVAYLHENG  168 (349)
T ss_dssp             E--CCCCSCBHHHHH----------------TTCSSCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             E--EeCCCCCHHHHH----------------HhcCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            8  777766665533                12234788999999999999999999863

>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp}

Probab=99.68  E-value=1.4e-16  Score=114.63  Aligned_cols=118  Identities=18%  Similarity=0.228  Sum_probs=96.7

Q ss_pred             cCCeeecceecccCCeeEEEEE-EcCCCEEEEEEeeccCc---cchhHHHHHHHHHhcccccCCCeeeeecceecCCCcc
Q 039630           33 TNGFRTSNKIGEGGFGSVYKGR-LEDGTVVAVNVLSVESK---QGETEFMSEVASMANINICHENLVKLHGGCIDGPSRI  108 (174)
Q Consensus        33 ~~~~~~~~~lg~G~~g~V~~~~-~~~~~~~avK~~~~~~~---~~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~~~~~~~  108 (174)
                      .++|++.+.||+|+||.||++. ..++..+|+|.+.....   .....+.+|+.++..++  ||||+++++.+...+..+
T Consensus        10 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~--hp~iv~~~~~~~~~~~~~   87 (294)
T 4eqm_A           10 NERYKIVDKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLS--HQNIVSMIDVDEEDDCYY   87 (294)
T ss_dssp             ETTEEEEEEEEEETTEEEEEEEETTTCSEEEEEEEECCSSCCHHHHHHHHHHHHHHTTCC--BTTBCCEEEEEECSSEEE
T ss_pred             hccEEEEEEEccCCCEEEEEEEECCCCCeEEEEEeccCccccHHHHHHHHHHHHHHhcCC--CCCCceEEEeeeeCCeEE
Confidence            4679999999999999999998 55788999999965422   23457889999999999  999999999999888888


Q ss_pred             cchhhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhcc
Q 039630          109 LAPLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEI  170 (174)
Q Consensus       109 lv~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  170 (174)
                      +++  ++.+++.+...+.                ....+++..+..++.|++.||.|||++.
T Consensus        88 lv~--e~~~g~~L~~~l~----------------~~~~~~~~~~~~~~~qi~~~l~~lH~~~  131 (294)
T 4eqm_A           88 LVM--EYIEGPTLSEYIE----------------SHGPLSVDTAINFTNQILDGIKHAHDMR  131 (294)
T ss_dssp             EEE--ECCCSCBHHHHHH----------------HHCSCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             EEE--eCCCCCCHHHHHH----------------hcCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            888  7776666655331                1224788999999999999999999864

>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A*

Probab=99.68  E-value=1.3e-16  Score=117.53  Aligned_cols=146  Identities=16%  Similarity=0.207  Sum_probs=104.4

Q ss_pred             ceechhhHHhhcCCeeecceecccCCeeEEEEEE------cCCCEEEEEEeeccC-ccchhHHHHHHHHHhcccccCCCe
Q 039630           22 SKISYNELKIATNGFRTSNKIGEGGFGSVYKGRL------EDGTVVAVNVLSVES-KQGETEFMSEVASMANINICHENL   94 (174)
Q Consensus        22 ~~~~~~~~~~~~~~~~~~~~lg~G~~g~V~~~~~------~~~~~~avK~~~~~~-~~~~~~~~~e~~~l~~l~~~h~~i   94 (174)
                      ..+....|....++|.+.+.||+|+||.||++..      .+++.||+|+++... ......+.+|+.++..+. .||||
T Consensus        10 ~~~~~~~~~~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~-~hpni   88 (359)
T 3vhe_A           10 LPYDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIG-HHLNV   88 (359)
T ss_dssp             SCCCHHHHBCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHC-CCTTB
T ss_pred             CCCCcccccccccceeeceeecCCCCceEEEEEeccccccccceEEEEEEecCcCCHHHHHHHHHHHHHHHhhc-CCcce
Confidence            3466678888889999999999999999999973      235789999997543 233567899999999993 38999


Q ss_pred             eeeecceecCCC-cccchhhhhhhhhhhhhhhhcccceee----------------------------------------
Q 039630           95 VKLHGGCIDGPS-RILAPLQASIEALFLFTKLWKMDKFIS----------------------------------------  133 (174)
Q Consensus        95 ~~~~~~~~~~~~-~~lv~~~~~~~~~~l~~~~~~~~~~~~----------------------------------------  133 (174)
                      +++++++...+. .++++  ++..++.|...+........                                        
T Consensus        89 v~~~~~~~~~~~~~~iv~--e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  166 (359)
T 3vhe_A           89 VNLLGACTKPGGPLMVIV--EFCKFGNLSTYLRSKRNEFVPYKTKGARFRQGKDYVGAIPVDLKRRLDSITSSQSSASSG  166 (359)
T ss_dssp             CCEEEEECSTTSCCEEEE--ECCTTEEHHHHHHTTTTSBCSCC-------------------------------------
T ss_pred             eeeeeeeecCCCceEEEE--EecCCCcHHHHHHhccccccccccccchhhcccccccccchhhhccccccCccccccccc
Confidence            999999887654 67777  77777776654433211000                                        


Q ss_pred             ---------e-eeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhcc
Q 039630          134 ---------I-YVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEI  170 (174)
Q Consensus       134 ---------~-~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  170 (174)
                               . ............+++..+..++.|++.||+|||++.
T Consensus       167 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~LH~~~  213 (359)
T 3vhe_A          167 FVEEKSLSDVEEEEAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRK  213 (359)
T ss_dssp             -----------------CTTTTCBCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             cccccccchhhhcccccchhccccCHHHHHHHHHHHHHHHHHHHHCC
Confidence                     0 000000001223889999999999999999999864

>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B*

Probab=99.68  E-value=1.4e-16  Score=118.80  Aligned_cols=120  Identities=20%  Similarity=0.179  Sum_probs=97.6

Q ss_pred             cCCeeecceeccc--CCeeEEEEE-EcCCCEEEEEEeeccC--ccchhHHHHHHHHHhcccccCCCeeeeecceecCCCc
Q 039630           33 TNGFRTSNKIGEG--GFGSVYKGR-LEDGTVVAVNVLSVES--KQGETEFMSEVASMANINICHENLVKLHGGCIDGPSR  107 (174)
Q Consensus        33 ~~~~~~~~~lg~G--~~g~V~~~~-~~~~~~~avK~~~~~~--~~~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~~~~~~  107 (174)
                      .++|++.+.||+|  +||.||++. ..++..||+|+++...  ......+.+|+.+++.++  ||||+++++++...+..
T Consensus        24 ~~~y~~~~~lG~G~~~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~--h~niv~~~~~~~~~~~~  101 (389)
T 3gni_B           24 GGCYELLTVIGKGFEDLMTVNLARYKPTGEYVTVRRINLEACSNEMVTFLQGELHVSKLFN--HPNIVPYRATFIADNEL  101 (389)
T ss_dssp             GGGEEEEEEEEEETTTTEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCC--CTTBCCEEEEEEETTEE
T ss_pred             CCcEEEEecccCCcCCceEEEEEEEcCCCCEEEEEEecccccChHHHHHHHHHHHHHHhCC--CCCCCcEeEEEEECCEE
Confidence            4579999999999  999999999 4579999999997552  333566888999999999  99999999999999988


Q ss_pred             ccchhhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhcc
Q 039630          108 ILAPLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEI  170 (174)
Q Consensus       108 ~lv~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  170 (174)
                      ++|+  ++.+++.+...+..              .....+++..+..++.|++.||+|||++.
T Consensus       102 ~lv~--e~~~~~~L~~~l~~--------------~~~~~~~~~~~~~~~~qi~~~l~~LH~~~  148 (389)
T 3gni_B          102 WVVT--SFMAYGSAKDLICT--------------HFMDGMNELAIAYILQGVLKALDYIHHMG  148 (389)
T ss_dssp             EEEE--ECCTTCBHHHHHHH--------------TCTTCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             EEEE--EccCCCCHHHHHhh--------------hcccCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            8888  77766666553321              11234789999999999999999999863

>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens}

Probab=99.68  E-value=1e-16  Score=118.22  Aligned_cols=120  Identities=21%  Similarity=0.244  Sum_probs=96.8

Q ss_pred             hcCCeeecceecccCCeeEEEEE-EcCCCEEEEEEeecc---CccchhHHHHHHHHHhcccccCCCeeeeecceecCCCc
Q 039630           32 ATNGFRTSNKIGEGGFGSVYKGR-LEDGTVVAVNVLSVE---SKQGETEFMSEVASMANINICHENLVKLHGGCIDGPSR  107 (174)
Q Consensus        32 ~~~~~~~~~~lg~G~~g~V~~~~-~~~~~~~avK~~~~~---~~~~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~~~~~~  107 (174)
                      ..++|++++.||+|+||.||++. ..+++.+|+|+++..   .......+..|..++..+. .||||+++++++...+..
T Consensus        21 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~~~-~hp~Iv~l~~~~~~~~~~   99 (353)
T 3txo_A           21 GIDNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLAR-NHPFLTQLFCCFQTPDRL   99 (353)
T ss_dssp             --CCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHHTTHHHHHHHHHHHHHTT-TCTTBCCEEEEEECSSEE
T ss_pred             chhheEEEEEEeeCCCEEEEEEEEcCCCCEEEEEEEEHHHhcchhHHHHHHHHHHHHHhcc-CCCceeeEEEEEEeCCEE
Confidence            34689999999999999999999 456899999999754   2334566788999998873 399999999999999988


Q ss_pred             ccchhhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhcc
Q 039630          108 ILAPLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEI  170 (174)
Q Consensus       108 ~lv~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  170 (174)
                      ++|+  ++.+++.+...+.                ....+++..+..++.|++.||+|||++.
T Consensus       100 ~lv~--E~~~gg~L~~~l~----------------~~~~~~~~~~~~~~~qi~~aL~~LH~~g  144 (353)
T 3txo_A          100 FFVM--EFVNGGDLMFHIQ----------------KSRRFDEARARFYAAEIISALMFLHDKG  144 (353)
T ss_dssp             EEEE--ECCCSCBHHHHHH----------------HHSSCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             EEEE--eCCCCCcHHHHHH----------------HcCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            8888  7777777665432                1234789999999999999999999864

>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A*

Probab=99.68  E-value=1.2e-16  Score=113.66  Aligned_cols=117  Identities=19%  Similarity=0.216  Sum_probs=97.5

Q ss_pred             CCeeecceecccCCeeEEEEE-EcCCCEEEEEEeeccCccchhHHHHHHHHHhcccccCCCeeeeecceecCCCcccchh
Q 039630           34 NGFRTSNKIGEGGFGSVYKGR-LEDGTVVAVNVLSVESKQGETEFMSEVASMANINICHENLVKLHGGCIDGPSRILAPL  112 (174)
Q Consensus        34 ~~~~~~~~lg~G~~g~V~~~~-~~~~~~~avK~~~~~~~~~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~~~~~~~lv~~  112 (174)
                      ++|.+.+.||+|+||.||++. ..++..+|+|.+..........+.+|+.+++.++  |+||+++++.+...+..++++ 
T Consensus         9 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~E~~~l~~l~--h~~i~~~~~~~~~~~~~~lv~-   85 (277)
T 3f3z_A            9 QYYTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLD--HPNIIRLYETFEDNTDIYLVM-   85 (277)
T ss_dssp             HHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHTCC--CTTBCCEEEEEECSSEEEEEE-
T ss_pred             hhEEeeeEEeecCCEEEEEEEeCCCCcEEEEEeehhhccchHHHHHHHHHHHHhCC--CCCEeeEEEEEecCCeEEEEE-
Confidence            469999999999999999999 4557799999998765566778999999999999  999999999999888888888 


Q ss_pred             hhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhcc
Q 039630          113 QASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEI  170 (174)
Q Consensus       113 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  170 (174)
                       ++.+++.+...+.                ....+++..+..++.|++.||.|||++.
T Consensus        86 -e~~~~~~L~~~~~----------------~~~~~~~~~~~~i~~~i~~~l~~lH~~~  126 (277)
T 3f3z_A           86 -ELCTGGELFERVV----------------HKRVFRESDAARIMKDVLSAVAYCHKLN  126 (277)
T ss_dssp             -ECCCSCBHHHHHH----------------HHCSCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             -eccCCCcHHHHHH----------------HcCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence             6666666554331                1234788999999999999999999863

>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A

Probab=99.68  E-value=2.6e-16  Score=113.98  Aligned_cols=117  Identities=16%  Similarity=0.239  Sum_probs=96.2

Q ss_pred             CCeeec-ceecccCCeeEEEEE-EcCCCEEEEEEeeccCccchhHHHHHHHHHhcc-cccCCCeeeeecceecCCCcccc
Q 039630           34 NGFRTS-NKIGEGGFGSVYKGR-LEDGTVVAVNVLSVESKQGETEFMSEVASMANI-NICHENLVKLHGGCIDGPSRILA  110 (174)
Q Consensus        34 ~~~~~~-~~lg~G~~g~V~~~~-~~~~~~~avK~~~~~~~~~~~~~~~e~~~l~~l-~~~h~~i~~~~~~~~~~~~~~lv  110 (174)
                      +.|.+. +.||+|+||.||++. ..++..||+|+++.........+.+|+.++.++ +  |+||+++++.+...+..+++
T Consensus        12 ~~y~i~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~~~~--h~~i~~~~~~~~~~~~~~lv   89 (316)
T 2ac3_A           12 DVYQLQEDVLGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFREVEMLYQCQG--HRNVLELIEFFEEEDRFYLV   89 (316)
T ss_dssp             TSCEECCCCCCCCSSEEEEEEECSSSCCEEEEEEEECCSSCCHHHHHHHHHHHHHTCC--CTTBCCEEEEEEETTEEEEE
T ss_pred             eeEEecCceecCCceEEEEEEEEcCCCcEEEEEEEeeCcchhHHHHHHHHHHHHHhcC--CCCeeeEEEEEeeCCEEEEE
Confidence            457774 789999999999998 567899999999866555677899999999884 6  99999999999999888888


Q ss_pred             hhhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhcc
Q 039630          111 PLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEI  170 (174)
Q Consensus       111 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  170 (174)
                      +  ++.+++.+...+.                ....+++..+..++.|++.||+|||++.
T Consensus        90 ~--e~~~~~~L~~~l~----------------~~~~~~~~~~~~i~~qi~~~l~~lH~~~  131 (316)
T 2ac3_A           90 F--EKMRGGSILSHIH----------------KRRHFNELEASVVVQDVASALDFLHNKG  131 (316)
T ss_dssp             E--ECCTTCBHHHHHH----------------HHSSCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             E--EcCCCCcHHHHHh----------------ccCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            8  7777666655431                1224788899999999999999999863

>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*

Probab=99.67  E-value=7.7e-17  Score=123.67  Aligned_cols=117  Identities=23%  Similarity=0.362  Sum_probs=92.7

Q ss_pred             CCeeecceecccCCeeEEEEE-EcCCCEEEEEEeeccC--ccchhHHHHHHHHHhcccccCCCeeeeecceecCCCcccc
Q 039630           34 NGFRTSNKIGEGGFGSVYKGR-LEDGTVVAVNVLSVES--KQGETEFMSEVASMANINICHENLVKLHGGCIDGPSRILA  110 (174)
Q Consensus        34 ~~~~~~~~lg~G~~g~V~~~~-~~~~~~~avK~~~~~~--~~~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~~~~~~~lv  110 (174)
                      +.|++++.||+|+||.||+|. ..++..+|+|+++...  ......+.+|+.+++.++  ||||+++++++......++|
T Consensus        37 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~--hpniv~~~~~~~~~~~~~lv  114 (494)
T 3lij_A           37 EMYQRVKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLD--HPNIMKLYDFFEDKRNYYLV  114 (494)
T ss_dssp             HHEEEEEEEECC---EEEEEEETTTCCEEEEEEEEC-----CTTHHHHHHHHHHTTCC--CTTBCCEEEEEECSSEEEEE
T ss_pred             cCeEEeeEEecCCCEEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHhCC--CCCCCeEEEEEEeCCEEEEE
Confidence            459999999999999999999 4578899999997552  334567899999999999  99999999999998888888


Q ss_pred             hhhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhcc
Q 039630          111 PLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEI  170 (174)
Q Consensus       111 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  170 (174)
                      +  ++..++.+...+.                ....+++..+..++.|++.||.|||++.
T Consensus       115 ~--e~~~~g~L~~~~~----------------~~~~~~~~~~~~i~~qi~~~l~~lH~~~  156 (494)
T 3lij_A          115 M--ECYKGGELFDEII----------------HRMKFNEVDAAVIIKQVLSGVTYLHKHN  156 (494)
T ss_dssp             E--ECCCSCBHHHHHH----------------HHSSCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             E--ecCCCCcHHHHHH----------------HcCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            8  7777766655332                1234788899999999999999999763

>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe}

Probab=99.67  E-value=9.8e-17  Score=117.56  Aligned_cols=116  Identities=16%  Similarity=0.222  Sum_probs=94.6

Q ss_pred             CCeeecceecccCCeeEEEEE-EcCCCEEEEEEeecc---CccchhHHHHHHHHHhcccccCCCeeeeecceecCCCccc
Q 039630           34 NGFRTSNKIGEGGFGSVYKGR-LEDGTVVAVNVLSVE---SKQGETEFMSEVASMANINICHENLVKLHGGCIDGPSRIL  109 (174)
Q Consensus        34 ~~~~~~~~lg~G~~g~V~~~~-~~~~~~~avK~~~~~---~~~~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~~~~~~~l  109 (174)
                      ++|.+.+.||+|+||.||+|. ..+++.||+|++...   .......+.+|+.+++.++  ||||+++++++...+..++
T Consensus         9 ~~Y~i~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~--hpnIv~l~~~~~~~~~~~l   86 (336)
T 3h4j_B            9 GPYIIRETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLR--HPHIIKLYDVITTPTDIVM   86 (336)
T ss_dssp             TTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCSHHHHHHHHHHTTCC--CTTBCCEEEEEECSSEEEE
T ss_pred             CCEEEEEEEecCCCeEEEEEEECCCCCEEEEEEEehHHccchhHHHHHHHHHHHHHhCC--CCCCCeEEEEEEeCCEEEE
Confidence            579999999999999999999 567899999999744   1233457889999999999  9999999999999988888


Q ss_pred             chhhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhcc
Q 039630          110 APLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEI  170 (174)
Q Consensus       110 v~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  170 (174)
                      ++  ++. .+.+...+.                ....+++..+..++.|++.||.|||++.
T Consensus        87 v~--E~~-~g~l~~~l~----------------~~~~l~~~~~~~i~~qi~~aL~~LH~~g  128 (336)
T 3h4j_B           87 VI--EYA-GGELFDYIV----------------EKKRMTEDEGRRFFQQIICAIEYCHRHK  128 (336)
T ss_dssp             EE--CCC-CEEHHHHHH----------------HHCSCCHHHHHHHHHHHHHHHHHHHHHT
T ss_pred             EE--ECC-CCcHHHHHH----------------HcCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            88  555 344444331                1234789999999999999999999864

>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens}

Probab=99.67  E-value=2.2e-16  Score=116.96  Aligned_cols=127  Identities=24%  Similarity=0.354  Sum_probs=99.2

Q ss_pred             hhcCCeeecceecccCCeeEEEEEEc------CCCEEEEEEeecc-CccchhHHHHHHHHHhcccccCCCeeeeecceec
Q 039630           31 IATNGFRTSNKIGEGGFGSVYKGRLE------DGTVVAVNVLSVE-SKQGETEFMSEVASMANINICHENLVKLHGGCID  103 (174)
Q Consensus        31 ~~~~~~~~~~~lg~G~~g~V~~~~~~------~~~~~avK~~~~~-~~~~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~~  103 (174)
                      ...++|.+.+.||+|+||.||+|.+.      ++..||+|.++.. .......+.+|+.++..++  |+||+++++++..
T Consensus        68 ~~~~~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~--hpnIv~~~~~~~~  145 (367)
T 3l9p_A           68 VPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFN--HQNIVRCIGVSLQ  145 (367)
T ss_dssp             CCGGGEEEEEECCCCSSSCEEEEEECC-----CCEEEEEEECCSSCCHHHHHHHHHHHHHHHHCC--CTTBCCEEEEECS
T ss_pred             cCHhHeEEeeEeeeCCCEEEEEEEEccCCCCCcceeEEEEecccccChhhHHHHHHHHHHHHhCC--CCCCCeEEEEEec
Confidence            34567999999999999999999842      4568999999744 2334556889999999999  9999999999999


Q ss_pred             CCCcccchhhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhcc
Q 039630          104 GPSRILAPLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEI  170 (174)
Q Consensus       104 ~~~~~lv~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  170 (174)
                      ....++|+  ++.+++.|...+.....         .......+++..++.++.|++.||+|||++.
T Consensus       146 ~~~~~lv~--e~~~~g~L~~~l~~~~~---------~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~  201 (367)
T 3l9p_A          146 SLPRFILL--ELMAGGDLKSFLRETRP---------RPSQPSSLAMLDLLHVARDIACGCQYLEENH  201 (367)
T ss_dssp             SSSCEEEE--ECCTTEEHHHHHHHHSC---------CSSSCCCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             CCCCEEEE--EeCCCCCHHHHHHhhcc---------ccCccccccHHHHHHHHHHHHHHHHHHHhCC
Confidence            88888888  77777776654432111         1122235789999999999999999999864

>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ...

Probab=99.67  E-value=1.3e-16  Score=114.57  Aligned_cols=120  Identities=24%  Similarity=0.377  Sum_probs=94.7

Q ss_pred             hcCCeeecceecccCCeeEEEEEE-----cCCCEEEEEEeeccCccchhHHHHHHHHHhcccccCCCeeeeecceecC--
Q 039630           32 ATNGFRTSNKIGEGGFGSVYKGRL-----EDGTVVAVNVLSVESKQGETEFMSEVASMANINICHENLVKLHGGCIDG--  104 (174)
Q Consensus        32 ~~~~~~~~~~lg~G~~g~V~~~~~-----~~~~~~avK~~~~~~~~~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~~~--  104 (174)
                      ..++|++.+.||+|+||.||++.+     .++..||+|+++.........+.+|+.++..++  |+||+++++++...  
T Consensus         8 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~--h~~iv~~~~~~~~~~~   85 (295)
T 3ugc_A            8 EERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQ--HDNIVKYKGVCYSAGR   85 (295)
T ss_dssp             CGGGEEEEEEEEECSSEEEEEEEECTTCSSCCEEEEEEEESCCCHHHHHHHHHHHHHHHTCC--CTTBCCEEEEECHHHH
T ss_pred             CHHHhhhhheeeccCCEEEEEEEEecccCCCCcEEEEEEcccCCHHHHHHHHHHHHHHHhCC--CCCEeeEEEEEecCCC
Confidence            346799999999999999999984     357899999998665555678899999999999  99999999988553  


Q ss_pred             CCcccchhhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhcc
Q 039630          105 PSRILAPLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEI  170 (174)
Q Consensus       105 ~~~~lv~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  170 (174)
                      ...++++  ++.+++.+...+..               ....+++..+..++.|++.||+|||++.
T Consensus        86 ~~~~lv~--e~~~~~~L~~~l~~---------------~~~~~~~~~~~~~~~qi~~~l~~lH~~~  134 (295)
T 3ugc_A           86 RNLKLIM--EYLPYGSLRDYLQK---------------HKERIDHIKLLQYTSQICKGMEYLGTKR  134 (295)
T ss_dssp             TSCEEEE--ECCTTCBHHHHHHH---------------CGGGCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             CceEEEE--EeCCCCCHHHHHHh---------------cccccCHHHHHHHHHHHHHHHHHHhcCC
Confidence            3456666  66666666553311               1234788999999999999999999864

>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ...

Probab=99.67  E-value=1.3e-16  Score=117.48  Aligned_cols=117  Identities=21%  Similarity=0.250  Sum_probs=97.1

Q ss_pred             CCeeecceecccCCeeEEEEE-EcCCCEEEEEEeeccC---ccchhHHHHHHHHHhcccccCCCeeeeecceecCCCccc
Q 039630           34 NGFRTSNKIGEGGFGSVYKGR-LEDGTVVAVNVLSVES---KQGETEFMSEVASMANINICHENLVKLHGGCIDGPSRIL  109 (174)
Q Consensus        34 ~~~~~~~~lg~G~~g~V~~~~-~~~~~~~avK~~~~~~---~~~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~~~~~~~l  109 (174)
                      ++|.+++.||+|+||.||++. ..++..+|+|+++...   ......+.+|+.++..++  ||||+++++.+...+..++
T Consensus        41 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~--hp~iv~~~~~~~~~~~~~l  118 (350)
T 1rdq_E           41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN--FPFLVKLEFSFKDNSNLYM  118 (350)
T ss_dssp             GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCC--CTTBCCEEEEEECSSEEEE
T ss_pred             HHCEEEEEeecCcCcEEEEEEECCCCCEEEEEEEEhHHhccHHHHHHHHHHHHHHHhCC--CCCCCeEEEEEEcCCEEEE
Confidence            579999999999999999999 4578999999997542   234567889999999998  9999999999999888888


Q ss_pred             chhhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhcc
Q 039630          110 APLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEI  170 (174)
Q Consensus       110 v~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  170 (174)
                      ++  ++.+++.+...+.                ....+++..+..++.|++.||.|||++.
T Consensus       119 v~--e~~~gg~L~~~l~----------------~~~~~~~~~~~~~~~qi~~aL~~LH~~~  161 (350)
T 1rdq_E          119 VM--EYVAGGEMFSHLR----------------RIGRFSEPHARFYAAQIVLTFEYLHSLD  161 (350)
T ss_dssp             EE--ECCTTCBHHHHHH----------------HHCCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             EE--cCCCCCcHHHHHH----------------HcCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            88  7777777665432                1224788999999999999999999853

>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus}

Probab=99.67  E-value=1.2e-16  Score=119.51  Aligned_cols=118  Identities=20%  Similarity=0.193  Sum_probs=95.7

Q ss_pred             cCCeeecceecccCCeeEEEEE-EcCCCEEEEEEeeccC---ccchhHHHHHHHHHhcc-cccCCCeeeeecceecCCCc
Q 039630           33 TNGFRTSNKIGEGGFGSVYKGR-LEDGTVVAVNVLSVES---KQGETEFMSEVASMANI-NICHENLVKLHGGCIDGPSR  107 (174)
Q Consensus        33 ~~~~~~~~~lg~G~~g~V~~~~-~~~~~~~avK~~~~~~---~~~~~~~~~e~~~l~~l-~~~h~~i~~~~~~~~~~~~~  107 (174)
                      .++|.+++.||+|+||.||++. ..+++.+|+|+++...   ......+..|..++..+ +  ||||+++++++.+.+..
T Consensus        51 ~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AvK~~~k~~~~~~~~~~~~~~E~~il~~~~~--hp~Iv~l~~~~~~~~~~  128 (396)
T 4dc2_A           51 LQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASN--HPFLVGLHSCFQTESRL  128 (396)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGTC----CCHHHHHHHHHHHHTT--CTTBCCEEEEEECSSEE
T ss_pred             hhHcEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhcCC--CCCcCeeEEEEEECCEE
Confidence            3579999999999999999999 4568899999998552   23345678899998876 6  99999999999999988


Q ss_pred             ccchhhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhcc
Q 039630          108 ILAPLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEI  170 (174)
Q Consensus       108 ~lv~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  170 (174)
                      ++|+  ++.+++.+...+.                ....+++..+..++.||+.||+|||++.
T Consensus       129 ~lV~--E~~~gg~L~~~l~----------------~~~~l~~~~~~~~~~qi~~aL~~LH~~g  173 (396)
T 4dc2_A          129 FFVI--EYVNGGDLMFHMQ----------------RQRKLPEEHARFYSAEISLALNYLHERG  173 (396)
T ss_dssp             EEEE--ECCTTCBHHHHHH----------------HHSSCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             EEEE--EcCCCCcHHHHHH----------------HcCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            8888  7777777765432                1234789999999999999999999864

>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens}

Probab=99.67  E-value=6.8e-17  Score=117.09  Aligned_cols=117  Identities=21%  Similarity=0.204  Sum_probs=88.0

Q ss_pred             CCeeecceecccCCeeEEEEEE-cCCCEEEEEEeeccC--ccchhHHHHHHHHHhcc-cccCCCeeeeecceecCCCccc
Q 039630           34 NGFRTSNKIGEGGFGSVYKGRL-EDGTVVAVNVLSVES--KQGETEFMSEVASMANI-NICHENLVKLHGGCIDGPSRIL  109 (174)
Q Consensus        34 ~~~~~~~~lg~G~~g~V~~~~~-~~~~~~avK~~~~~~--~~~~~~~~~e~~~l~~l-~~~h~~i~~~~~~~~~~~~~~l  109 (174)
                      ++|+..+.||+|+||.||+|.. .+++.||||++....  .........|+..+..+ .  |+||+++++++...+..++
T Consensus        57 ~~y~~~~~LG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~~~~~~~--h~~iv~l~~~~~~~~~~~l  134 (311)
T 3p1a_A           57 QSFQRLSRLGHGSYGEVFKVRSKEDGRLYAVKRSMSPFRGPKDRARKLAEVGSHEKVGQ--HPCCVRLEQAWEEGGILYL  134 (311)
T ss_dssp             HHEEEEEEEEEETTEEEEEEEETTTSCEEEEEEESSSCCSHHHHHHHHHHHHHHHHHCC--CTTBCCEEEEEEETTEEEE
T ss_pred             hheeeeheeccCCCeEEEEEEECCCCeEEEEEEecccccChHHHHHHHHHHHHHHHhcC--CCcEEEEEEEEEeCCEEEE
Confidence            5699999999999999999995 478999999986542  22333455666655555 6  9999999999999988888


Q ss_pred             chhhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhcc
Q 039630          110 APLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEI  170 (174)
Q Consensus       110 v~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  170 (174)
                      ++  ++.. +.+...+.               .....+++..+..++.|++.||+|||++.
T Consensus       135 v~--e~~~-~~L~~~~~---------------~~~~~l~~~~~~~i~~qi~~aL~~LH~~~  177 (311)
T 3p1a_A          135 QT--ELCG-PSLQQHCE---------------AWGASLPEAQVWGYLRDTLLALAHLHSQG  177 (311)
T ss_dssp             EE--ECCC-CBHHHHHH---------------HHCSCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             EE--eccC-CCHHHHHH---------------hcCCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            88  5443 23333221               11234789999999999999999999753

>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A*

Probab=99.67  E-value=1.4e-16  Score=117.11  Aligned_cols=117  Identities=21%  Similarity=0.199  Sum_probs=95.4

Q ss_pred             CCeeecceecccCCeeEEEEE-EcCCCEEEEEEeeccC---ccchhHHHHHHHHHhcc-cccCCCeeeeecceecCCCcc
Q 039630           34 NGFRTSNKIGEGGFGSVYKGR-LEDGTVVAVNVLSVES---KQGETEFMSEVASMANI-NICHENLVKLHGGCIDGPSRI  108 (174)
Q Consensus        34 ~~~~~~~~lg~G~~g~V~~~~-~~~~~~~avK~~~~~~---~~~~~~~~~e~~~l~~l-~~~h~~i~~~~~~~~~~~~~~  108 (174)
                      ++|.+.+.||+|+||.||++. ..+++.+|+|+++...   ......+.+|..++..+ +  ||||+++++++...+..+
T Consensus         9 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~--hp~iv~l~~~~~~~~~~~   86 (345)
T 3a8x_A            9 QDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASN--HPFLVGLHSCFQTESRLF   86 (345)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGSCSHHHHHHHHHHHHHHHHTTT--CTTBCCEEEEEECSSEEE
T ss_pred             hheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEhHHhcchHHHHHHHHHHHHHHhcCC--CCccCeEEEEEEeCCEEE
Confidence            568999999999999999999 4568899999998552   22345678899999887 6  999999999999988888


Q ss_pred             cchhhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhcc
Q 039630          109 LAPLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEI  170 (174)
Q Consensus       109 lv~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  170 (174)
                      +++  ++.+++.+...+.                ....+++..+..++.|++.||+|||++.
T Consensus        87 lv~--e~~~gg~L~~~l~----------------~~~~l~~~~~~~~~~qi~~aL~~LH~~~  130 (345)
T 3a8x_A           87 FVI--EYVNGGDLMFHMQ----------------RQRKLPEEHARFYSAEISLALNYLHERG  130 (345)
T ss_dssp             EEE--CCCCSCBHHHHHH----------------HHSSCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             EEE--eCCCCCcHHHHHH----------------HcCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            888  7777766655331                1234789999999999999999999863

>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A*

Probab=99.67  E-value=1.4e-16  Score=117.21  Aligned_cols=121  Identities=17%  Similarity=0.230  Sum_probs=97.0

Q ss_pred             HhhcCCeeecceecccCCeeEEEEEE-cCCCEEEEEEeeccC---ccchhHHHHHHHHHhcc-cccCCCeeeeecceecC
Q 039630           30 KIATNGFRTSNKIGEGGFGSVYKGRL-EDGTVVAVNVLSVES---KQGETEFMSEVASMANI-NICHENLVKLHGGCIDG  104 (174)
Q Consensus        30 ~~~~~~~~~~~~lg~G~~g~V~~~~~-~~~~~~avK~~~~~~---~~~~~~~~~e~~~l~~l-~~~h~~i~~~~~~~~~~  104 (174)
                      ....++|.+.+.||+|+||.||++.. .+++.||+|+++...   ......+..|..++..+ +  ||||+++++.+.+.
T Consensus        13 ~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~~~~--hp~iv~l~~~~~~~   90 (345)
T 1xjd_A           13 KLKIEDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWE--HPFLTHMFCTFQTK   90 (345)
T ss_dssp             ---CTTEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHTT--CTTBCCEEEEEECS
T ss_pred             CCChHHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhHHhhhhhhHHHHHHHHHHHHhcCC--CCCCCcEEEEEEeC
Confidence            34457899999999999999999994 568899999997542   33456678899988876 6  99999999999999


Q ss_pred             CCcccchhhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhcc
Q 039630          105 PSRILAPLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEI  170 (174)
Q Consensus       105 ~~~~lv~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  170 (174)
                      +..++++  ++.+++.+...+.                ....+++..+..++.|++.||+|||++.
T Consensus        91 ~~~~lv~--E~~~gg~L~~~l~----------------~~~~~~~~~~~~~~~qi~~aL~~LH~~~  138 (345)
T 1xjd_A           91 ENLFFVM--EYLNGGDLMYHIQ----------------SCHKFDLSRATFYAAEIILGLQFLHSKG  138 (345)
T ss_dssp             SEEEEEE--ECCTTCBHHHHHH----------------HHSSCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             CEEEEEE--eCCCCCcHHHHHH----------------HcCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            8888888  7777777765431                1234788999999999999999999864

>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A

Probab=99.67  E-value=1.6e-16  Score=120.60  Aligned_cols=123  Identities=20%  Similarity=0.339  Sum_probs=98.5

Q ss_pred             hhHHhhcCCeeecceecccCCeeEEEEEEcCCCEEEEEEeeccCccchhHHHHHHHHHhcccccCCCeeeeecceecCC-
Q 039630           27 NELKIATNGFRTSNKIGEGGFGSVYKGRLEDGTVVAVNVLSVESKQGETEFMSEVASMANINICHENLVKLHGGCIDGP-  105 (174)
Q Consensus        27 ~~~~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~avK~~~~~~~~~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~~~~-  105 (174)
                      ..|.+..++|.+.+.||+|+||.||++... +..||||+++...  ....+.+|+.++++++  |+||+++++.+...+ 
T Consensus       186 ~~~~i~~~~~~~~~~lG~G~fg~V~~~~~~-~~~vavK~~~~~~--~~~~~~~E~~~l~~l~--h~niv~~~~~~~~~~~  260 (450)
T 1k9a_A          186 SGWALNMKELKLLQTIGKGEFGDVMLGDYR-GNKVAVKCIKNDA--TAQAFLAEASVMTQLR--HSNLVQLLGVIVEEKG  260 (450)
T ss_dssp             TTCBCCGGGEEEEEEEEECSSEEEEEEEET-TEEEEEEEESSCT--TSHHHHHHHHHHHTCC--CTTBCCEEEEEECTTS
T ss_pred             cccccChHHeEEEeeecCcCCeeEEEEEec-CCeEEEEEeCCch--HHHHHHHHHHHHHhcc--CCCEEEEEEEEEcCCC
Confidence            345566678999999999999999999875 7799999997542  4567899999999999  999999999987665 


Q ss_pred             CcccchhhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhcc
Q 039630          106 SRILAPLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEI  170 (174)
Q Consensus       106 ~~~lv~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  170 (174)
                      ..++++  ++.+++.|...+...              ....+++..++.++.|++.||+|||++.
T Consensus       261 ~~~iv~--e~~~~g~L~~~l~~~--------------~~~~~~~~~~~~~~~qi~~~l~~LH~~~  309 (450)
T 1k9a_A          261 GLYIVT--EYMAKGSLVDYLRSR--------------GRSVLGGDCLLKFSLDVCEAMEYLEGNN  309 (450)
T ss_dssp             CEEEEE--ECCTTCBHHHHHHHH--------------CTTTCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             ceEEEE--EecCCCcHHHHHHhc--------------CCCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            677777  777777766544211              1123688889999999999999999853

>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ...

Probab=99.67  E-value=2e-16  Score=112.71  Aligned_cols=126  Identities=24%  Similarity=0.338  Sum_probs=99.3

Q ss_pred             chhhHHhhcCCeeecceecccCCeeEEEEEEcCCCEEEEEEeeccCccchhHHHHHHHHHhcccccCCCeeeeecceecC
Q 039630           25 SYNELKIATNGFRTSNKIGEGGFGSVYKGRLEDGTVVAVNVLSVESKQGETEFMSEVASMANINICHENLVKLHGGCIDG  104 (174)
Q Consensus        25 ~~~~~~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~avK~~~~~~~~~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~~~  104 (174)
                      -.++|....++|++.+.||+|+||.||++...++..+|+|.++.. ....+.+.+|+.+++.++  |+||+++++.+.. 
T Consensus         4 ~~~~~~v~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~-~~~~~~~~~E~~~l~~l~--h~~i~~~~~~~~~-   79 (279)
T 1qpc_A            4 WEDEWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQG-SMSPDAFLAEANLMKQLQ--HQRLVRLYAVVTQ-   79 (279)
T ss_dssp             TTCTTBCCGGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTT-SSCHHHHHHHHHHHHHCC--CTTBCCEEEEECS-
T ss_pred             chhhcccCHHhhhheeeecCCCCeEEEEEEEcCCcEEEEEEecCC-cccHHHHHHHHHHHHhCC--CcCcceEEEEEcC-
Confidence            335677777889999999999999999999877889999999754 334667899999999999  9999999998764 


Q ss_pred             CCcccchhhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhcc
Q 039630          105 PSRILAPLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEI  170 (174)
Q Consensus       105 ~~~~lv~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  170 (174)
                      +..++++  ++.+++.+...+..              .....+++..+..++.|++.||.|||++.
T Consensus        80 ~~~~~v~--e~~~~~~L~~~l~~--------------~~~~~~~~~~~~~i~~qi~~~l~~lH~~~  129 (279)
T 1qpc_A           80 EPIYIIT--EYMENGSLVDFLKT--------------PSGIKLTINKLLDMAAQIAEGMAFIEERN  129 (279)
T ss_dssp             SSCEEEE--ECCTTCBHHHHTTS--------------HHHHTCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             CCcEEEE--ecCCCCCHHHHHhc--------------CCCCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            4566776  66666666543210              11124788999999999999999999863

>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A*

Probab=99.67  E-value=1.8e-16  Score=115.21  Aligned_cols=121  Identities=21%  Similarity=0.312  Sum_probs=81.3

Q ss_pred             CCeeecceecccCCeeEEEEE-EcCCCEEEEEEeeccC-ccchhHHHHHHHHHhcccccCCCeeeeecceecCCCcccch
Q 039630           34 NGFRTSNKIGEGGFGSVYKGR-LEDGTVVAVNVLSVES-KQGETEFMSEVASMANINICHENLVKLHGGCIDGPSRILAP  111 (174)
Q Consensus        34 ~~~~~~~~lg~G~~g~V~~~~-~~~~~~~avK~~~~~~-~~~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~~~~~~~lv~  111 (174)
                      ++|+..+.||+|+||.||+|. ..++..||+|+++... ......+.+|+.+++.++  ||||+++++++...+..++++
T Consensus         5 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~--hp~iv~~~~~~~~~~~~~lv~   82 (317)
T 2pmi_A            5 SQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELK--HENIVRLYDVIHTENKLTLVF   82 (317)
T ss_dssp             --------------CEEEEEECSSSCCEEEEEEEECCSTTCSCHHHHHHHHHHTTCC--BTTBCCEEEEECCTTEEEEEE
T ss_pred             cceeEeeEECCCCCEEEEEEEECCCCcEEEEEEeecccccccHHHHHHHHHHHHhcC--CCCcceEEEEEEECCeEEEEE
Confidence            568899999999999999998 5678999999997553 334567889999999999  999999999999988888888


Q ss_pred             hhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhc
Q 039630          112 LQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEE  169 (174)
Q Consensus       112 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~  169 (174)
                        ++.++ .+...+....          .......+++..+..++.|++.||.|||++
T Consensus        83 --e~~~~-~L~~~l~~~~----------~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~  127 (317)
T 2pmi_A           83 --EFMDN-DLKKYMDSRT----------VGNTPRGLELNLVKYFQWQLLQGLAFCHEN  127 (317)
T ss_dssp             --ECCCC-BHHHHHHHHH----------SSSCCCCCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             --EecCC-CHHHHHHhcc----------ccccccCCCHHHHHHHHHHHHHHHHHHHHC
Confidence              55543 3333221110          011123478889999999999999999985

>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A*

Probab=99.67  E-value=1.2e-16  Score=116.70  Aligned_cols=118  Identities=19%  Similarity=0.269  Sum_probs=91.9

Q ss_pred             hcCCeeecceecccCCeeEEEEE-EcCCCEEEEEEeeccC--ccchhHHHHHHHHHhcccccCCCeeeeecceecCCCcc
Q 039630           32 ATNGFRTSNKIGEGGFGSVYKGR-LEDGTVVAVNVLSVES--KQGETEFMSEVASMANINICHENLVKLHGGCIDGPSRI  108 (174)
Q Consensus        32 ~~~~~~~~~~lg~G~~g~V~~~~-~~~~~~~avK~~~~~~--~~~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~~~~~~~  108 (174)
                      ..++|++.+.||+|+||.||++. ..++..||+|+++...  ......+.+|+.+++.++  |+||+++++++...+..+
T Consensus        32 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~--h~~iv~~~~~~~~~~~~~  109 (329)
T 3gbz_A           32 SIDRYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIREVSLLKELQ--HRNIIELKSVIHHNHRLH  109 (329)
T ss_dssp             CGGGEEEEEEEEECSSSEEEEEEETTTTEEEEEEECCCCC--------CHHHHHHGGGCC--CTTBCCEEEEEEETTEEE
T ss_pred             chhhEEEEEEEEecCCeEEEEEEECCCCceEEEEEEcccccccccchhHHHHHHHHHHcC--CCCcceEEEEEecCCEEE
Confidence            33579999999999999999998 5578899999997553  223456789999999999  999999999999998888


Q ss_pred             cchhhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhcc
Q 039630          109 LAPLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEI  170 (174)
Q Consensus       109 lv~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  170 (174)
                      +++  ++.++ .+...+.                ....+++..+..++.|++.||.|||++.
T Consensus       110 lv~--e~~~~-~L~~~~~----------------~~~~~~~~~~~~i~~ql~~~l~~LH~~~  152 (329)
T 3gbz_A          110 LIF--EYAEN-DLKKYMD----------------KNPDVSMRVIKSFLYQLINGVNFCHSRR  152 (329)
T ss_dssp             EEE--ECCSE-EHHHHHH----------------HCTTCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             EEE--ecCCC-CHHHHHh----------------hcCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            888  55553 3433221                1224788999999999999999999864

>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A*

Probab=99.67  E-value=2.3e-16  Score=115.06  Aligned_cols=118  Identities=20%  Similarity=0.231  Sum_probs=91.2

Q ss_pred             cCCeeecceecccCCeeEEEEEE----cCCCEEEEEEeeccC----ccchhHHHHHHHHHhcccccCCCeeeeecceecC
Q 039630           33 TNGFRTSNKIGEGGFGSVYKGRL----EDGTVVAVNVLSVES----KQGETEFMSEVASMANINICHENLVKLHGGCIDG  104 (174)
Q Consensus        33 ~~~~~~~~~lg~G~~g~V~~~~~----~~~~~~avK~~~~~~----~~~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~~~  104 (174)
                      .++|.+.+.||+|+||.||++..    .+++.+|+|+++...    ......+.+|+.+++.++  |+||+++++.+...
T Consensus        16 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~--hp~iv~~~~~~~~~   93 (327)
T 3a62_A           16 PECFELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVK--HPFIVDLIYAFQTG   93 (327)
T ss_dssp             GGGEEEEEEEEEETTEEEEEEEECSSTTTTCEEEEEEECCC--------------HHHHHHHCC--CTTBCCEEEEEECS
T ss_pred             HHHeEEEEEEEeCCCEEEEEEEEeccCCCCcEEEEEEEEHHHhhhhhhHHHHHHHHHHHHHhCC--CCCccceeEEEEcC
Confidence            35799999999999999999985    478999999997542    233456788999999999  99999999999999


Q ss_pred             CCcccchhhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhcc
Q 039630          105 PSRILAPLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEI  170 (174)
Q Consensus       105 ~~~~lv~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  170 (174)
                      +..++++  ++.+++.+...+.                ....+++..+..++.|++.||.|||++.
T Consensus        94 ~~~~lv~--e~~~~~~L~~~l~----------------~~~~~~~~~~~~~~~qi~~al~~lH~~~  141 (327)
T 3a62_A           94 GKLYLIL--EYLSGGELFMQLE----------------REGIFMEDTACFYLAEISMALGHLHQKG  141 (327)
T ss_dssp             SCEEEEE--ECCTTEEHHHHHH----------------HHSSCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             CEEEEEE--eCCCCCcHHHHHH----------------hCCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            9989988  7777676655331                1224788888999999999999999863

>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A*

Probab=99.66  E-value=2.6e-16  Score=112.35  Aligned_cols=118  Identities=17%  Similarity=0.266  Sum_probs=96.4

Q ss_pred             cCCeeecceecccCCeeEEEEE-EcCCCEEEEEEeeccC--ccchhHHHHHHHHHhcccccCCCeeeeecceecCCCccc
Q 039630           33 TNGFRTSNKIGEGGFGSVYKGR-LEDGTVVAVNVLSVES--KQGETEFMSEVASMANINICHENLVKLHGGCIDGPSRIL  109 (174)
Q Consensus        33 ~~~~~~~~~lg~G~~g~V~~~~-~~~~~~~avK~~~~~~--~~~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~~~~~~~l  109 (174)
                      .++|++.+.||+|+||.||++. ..++..+|+|++....  ......+.+|+.+++.++  |+||+++++.+...+..++
T Consensus         5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~--h~~i~~~~~~~~~~~~~~~   82 (284)
T 3kk8_A            5 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQ--HPNIVRLHDSIQEESFHYL   82 (284)
T ss_dssp             TTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCHHHHHHHHHHHHHHHHCC--CTTBCCEEEEEECSSEEEE
T ss_pred             hhhhhhhhhhcCcCCeEEEEEEEcCCCceEEEEEeecccCCHHHHHHHHHHHHHHHHcC--CCCcCeEEEEEEcCCEEEE
Confidence            4679999999999999999998 4568899999997552  233566889999999999  9999999999998888888


Q ss_pred             chhhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhcc
Q 039630          110 APLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEI  170 (174)
Q Consensus       110 v~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  170 (174)
                      ++  ++.+++.+...+.                ....+++..+..++.|++.||.|||++.
T Consensus        83 v~--e~~~~~~l~~~~~----------------~~~~~~~~~~~~~~~~i~~~l~~lH~~~  125 (284)
T 3kk8_A           83 VF--DLVTGGELFEDIV----------------AREFYSEADASHCIQQILESIAYCHSNG  125 (284)
T ss_dssp             EE--CCCCSCBHHHHHH----------------HHSSCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             EE--ecCCCCCHHHHHH----------------hcCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            88  6666666554332                1234788999999999999999999863

>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A*

Probab=99.66  E-value=3e-16  Score=118.55  Aligned_cols=117  Identities=15%  Similarity=0.203  Sum_probs=91.7

Q ss_pred             cCCeeecceecccCCeeEEEEE-EcCCCEEEEEEeeccC--ccchhHHHHHHHHHhcccccCCCeeeeecceecC-----
Q 039630           33 TNGFRTSNKIGEGGFGSVYKGR-LEDGTVVAVNVLSVES--KQGETEFMSEVASMANINICHENLVKLHGGCIDG-----  104 (174)
Q Consensus        33 ~~~~~~~~~lg~G~~g~V~~~~-~~~~~~~avK~~~~~~--~~~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~~~-----  104 (174)
                      .++|.+.+.||+|+||.||+|. ..++..||+|+++...  ......+.+|+.+++.++  |+||+++++.+...     
T Consensus        25 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~--h~nIv~l~~~~~~~~~~~~  102 (432)
T 3n9x_A           25 PDNYIIKHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRILREITILNRLK--SDYIIRLYDLIIPDDLLKF  102 (432)
T ss_dssp             CTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSTTTSHHHHHHHHHHHHHHHHCC--CTTBCCEEEECCCSCTTTC
T ss_pred             cCCEEEEEEEeecCCEEEEEEEECCCCcEEEEEEeCchhcChHHHHHHHHHHHHHHHcC--CCCcceEEEEEecCCCCcC
Confidence            3579999999999999999999 5668899999997542  234567899999999999  99999999998766     


Q ss_pred             CCcccchhhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhcc
Q 039630          105 PSRILAPLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEI  170 (174)
Q Consensus       105 ~~~~lv~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  170 (174)
                      ...++|+  ++.++ .+...+                .....+++..+..++.||+.||.|||++.
T Consensus       103 ~~~~lv~--e~~~~-~L~~~~----------------~~~~~l~~~~~~~i~~qil~aL~~LH~~g  149 (432)
T 3n9x_A          103 DELYIVL--EIADS-DLKKLF----------------KTPIFLTEEHIKTILYNLLLGENFIHESG  149 (432)
T ss_dssp             CCEEEEE--ECCSE-EHHHHH----------------HSSCCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             CeEEEEE--ecCCc-CHHHHH----------------hccCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            4566776  44432 333322                12234789999999999999999999863

>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7

Probab=99.66  E-value=2.3e-16  Score=115.43  Aligned_cols=139  Identities=29%  Similarity=0.331  Sum_probs=101.4

Q ss_pred             hHHhhcCCeeecceecccCCeeEEEEEEc------CCCEEEEEEeeccC-ccchhHHHHHHHHHhcccccCCCeeeeecc
Q 039630           28 ELKIATNGFRTSNKIGEGGFGSVYKGRLE------DGTVVAVNVLSVES-KQGETEFMSEVASMANINICHENLVKLHGG  100 (174)
Q Consensus        28 ~~~~~~~~~~~~~~lg~G~~g~V~~~~~~------~~~~~avK~~~~~~-~~~~~~~~~e~~~l~~l~~~h~~i~~~~~~  100 (174)
                      .+....++|.+.+.||+|+||.||++...      ++..||+|+++... ......+.+|+.++..++  ||||++++++
T Consensus        41 ~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~--hp~iv~~~~~  118 (343)
T 1luf_A           41 SLEYPRNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFD--NPNIVKLLGV  118 (343)
T ss_dssp             HTBCCGGGCEEEEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTCCHHHHHHHHHHHHHHHTCC--CTTBCCEEEE
T ss_pred             eeEecHHHCeeeeeeeecCCeeEEEEEecCcCCCCCceeEEEEEeccccCHHHHHHHHHHHHHHHhCC--CCCEEEEEEE
Confidence            44556678999999999999999999953      34789999997553 334567899999999999  9999999999


Q ss_pred             eecCCCcccchhhhhhhhhhhhhhhhcccceeeee--------eecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhcc
Q 039630          101 CIDGPSRILAPLQASIEALFLFTKLWKMDKFISIY--------VVSGSKKNRVKFNWIARREIALGIARGLAYIHEEI  170 (174)
Q Consensus       101 ~~~~~~~~lv~~~~~~~~~~l~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  170 (174)
                      +...+..++++  ++.+++.|...+..........        ...........+++..++.++.|++.||.|||++.
T Consensus       119 ~~~~~~~~lv~--e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~  194 (343)
T 1luf_A          119 CAVGKPMCLLF--EYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSERK  194 (343)
T ss_dssp             ECSSSSCEEEE--ECCTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             EccCCceEEEE--ecCCCCcHHHHHHHhCcccccccccccccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            99988888888  7777766665443321100000        00000011246889999999999999999999864

>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens}

Probab=99.66  E-value=4.8e-17  Score=117.90  Aligned_cols=125  Identities=25%  Similarity=0.306  Sum_probs=95.2

Q ss_pred             HHhhcCCeeecceecccCCeeEEEEE-EcCCCEEEEEEeeccCccchhHHHHHHHHHhcccccCCCeeeeecceec----
Q 039630           29 LKIATNGFRTSNKIGEGGFGSVYKGR-LEDGTVVAVNVLSVESKQGETEFMSEVASMANINICHENLVKLHGGCID----  103 (174)
Q Consensus        29 ~~~~~~~~~~~~~lg~G~~g~V~~~~-~~~~~~~avK~~~~~~~~~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~~----  103 (174)
                      +....++|++.+.||+|+||.||++. ..+++.||+|++..........+.+|+.+++.++  |+||+++++++..    
T Consensus        24 ~~i~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~--h~~iv~~~~~~~~~~~~  101 (317)
T 2buj_A           24 VIIDNKHYLFIQKLGEGGFSYVDLVEGLHDGHFYALKRILCHEQQDREEAQREADMHRLFN--HPNILRLVAYCLRERGA  101 (317)
T ss_dssp             EEETTEEEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEESSHHHHHHHHHHHHHHHTCC--CTTBCCCCEEEEEEETT
T ss_pred             EEECCeEEEEEEEecCCCCeEEEEEEecCCCcEEEEEEEecCCHHHHHHHHHHHHHHhhcC--CCCeeeEEEEEEeccCC
Confidence            33445679999999999999999999 4678999999997665556678899999999999  9999999999863    


Q ss_pred             CCCcccchhhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhc
Q 039630          104 GPSRILAPLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEE  169 (174)
Q Consensus       104 ~~~~~lv~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~  169 (174)
                      ....++++  ++...+.+...+...            ......+++..++.++.|++.||.|||++
T Consensus       102 ~~~~~lv~--e~~~~~~L~~~l~~~------------~~~~~~~~~~~~~~i~~qi~~~L~~LH~~  153 (317)
T 2buj_A          102 KHEAWLLL--PFFKRGTLWNEIERL------------KDKGNFLTEDQILWLLLGICRGLEAIHAK  153 (317)
T ss_dssp             EEEEEEEE--ECCTTCBHHHHHHHH------------HTTTCCCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             CceeEEEE--EeCCCCcHHHHHHHH------------HhcCCCCCHHHHHHHHHHHHHHHHHHHhC
Confidence            23455666  666666655433110            11234588999999999999999999986

>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A

Probab=99.66  E-value=3.3e-16  Score=112.35  Aligned_cols=117  Identities=10%  Similarity=-0.024  Sum_probs=93.4

Q ss_pred             hcCCeeecceecccCCeeEEEEEE-cCCCEEEEEEeeccCc---cchhHHHHHHHHHhcccccCCCeeeeecceecCCCc
Q 039630           32 ATNGFRTSNKIGEGGFGSVYKGRL-EDGTVVAVNVLSVESK---QGETEFMSEVASMANINICHENLVKLHGGCIDGPSR  107 (174)
Q Consensus        32 ~~~~~~~~~~lg~G~~g~V~~~~~-~~~~~~avK~~~~~~~---~~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~~~~~~  107 (174)
                      ..+.|++.+.||+|+||.||+|.. .+++.||+|++.....   .....+.+|+.++..++  |+||+++++++...+..
T Consensus        29 ~~~~y~i~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~--hp~iv~~~~~~~~~~~~  106 (286)
T 3uqc_A           29 ANGRYRLLIFHGGVPPLQFWQALDTALDRQVALTFVDPQGVLPDDVLQETLSRTLRLSRID--KPGVARVLDVVHTRAGG  106 (286)
T ss_dssp             TTTTEEEEEEEEBSTTCEEEEEEETTTTEEEEEEESCTTCCSCHHHHHHHHHHHHHHHTCC--CTTBCCEEEEEEETTEE
T ss_pred             ecCcEEEEEEEcccCCeEEEEEEecCCCceEEEEEECcccccCHHHHHHHHHHHHHHhcCC--CCCcceeeEEEEECCcE
Confidence            346799999999999999999994 4589999999975532   22467899999999998  99999999999998888


Q ss_pred             ccchhhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhcc
Q 039630          108 ILAPLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEI  170 (174)
Q Consensus       108 ~lv~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  170 (174)
                      ++++  ++.+++.|...+.                . . ........++.|++.||+|||++.
T Consensus       107 ~lv~--e~~~g~~L~~~l~----------------~-~-~~~~~~~~i~~ql~~aL~~lH~~g  149 (286)
T 3uqc_A          107 LVVA--EWIRGGSLQEVAD----------------T-S-PSPVGAIRAMQSLAAAADAAHRAG  149 (286)
T ss_dssp             EEEE--ECCCEEEHHHHHT----------------T-C-CCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             EEEE--EecCCCCHHHHHh----------------c-C-CChHHHHHHHHHHHHHHHHHHHCC
Confidence            8888  7776666655321                0 1 234467789999999999999864

>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens}

Probab=99.66  E-value=1.6e-16  Score=120.46  Aligned_cols=117  Identities=15%  Similarity=0.203  Sum_probs=95.5

Q ss_pred             CCeeecceecccCCeeEEEEE-EcCCCEEEEEEeeccC--ccchhHHHHHHHHHhcccccCCCeeeeecceecCCCcccc
Q 039630           34 NGFRTSNKIGEGGFGSVYKGR-LEDGTVVAVNVLSVES--KQGETEFMSEVASMANINICHENLVKLHGGCIDGPSRILA  110 (174)
Q Consensus        34 ~~~~~~~~lg~G~~g~V~~~~-~~~~~~~avK~~~~~~--~~~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~~~~~~~lv  110 (174)
                      ++|++.+.||+|+||.||+|. ..++..+|+|++....  ......+.+|+.+++.++  ||||+++++.+...+..+++
T Consensus        11 ~~Y~i~~~LG~G~fg~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~E~~il~~l~--hpnIv~l~~~~~~~~~~~lv   88 (444)
T 3soa_A           11 EEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICRLLK--HPNIVRLHDSISEEGHHYLI   88 (444)
T ss_dssp             HHEEEEEEEEEC--CEEEEEEETTTTEEEEEEEEESCSCHHHHHHHHHHHHHHHHHCC--BTTBCCEEEEEECSSEEEEE
T ss_pred             CCeEEEEEeccCCCeEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhCC--CcCCCeEEEEEEECCEEEEE
Confidence            469999999999999999998 5678999999997553  233556889999999999  99999999999999888888


Q ss_pred             hhhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhcc
Q 039630          111 PLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEI  170 (174)
Q Consensus       111 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  170 (174)
                      +  ++..++.+...+.                ....+++..+..++.|++.||.|||++.
T Consensus        89 ~--E~~~gg~L~~~i~----------------~~~~~~e~~~~~i~~qil~aL~~lH~~g  130 (444)
T 3soa_A           89 F--DLVTGGELFEDIV----------------AREYYSEADASHCIQQILEAVLHCHQMG  130 (444)
T ss_dssp             E--CCCBCCBHHHHHH----------------HCSCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             E--EeCCCCCHHHHHH----------------HcCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            8  7777777665442                1234789999999999999999999863

>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7

Probab=99.66  E-value=3.6e-16  Score=114.58  Aligned_cols=138  Identities=20%  Similarity=0.237  Sum_probs=98.8

Q ss_pred             hHHhhcCCeeecceecccCCeeEEEEEE------cCCCEEEEEEeecc-CccchhHHHHHHHHHhcc-cccCCCeeeeec
Q 039630           28 ELKIATNGFRTSNKIGEGGFGSVYKGRL------EDGTVVAVNVLSVE-SKQGETEFMSEVASMANI-NICHENLVKLHG   99 (174)
Q Consensus        28 ~~~~~~~~~~~~~~lg~G~~g~V~~~~~------~~~~~~avK~~~~~-~~~~~~~~~~e~~~l~~l-~~~h~~i~~~~~   99 (174)
                      +|....++|.+.+.||+|+||.||+|..      .++..||+|+++.. .......+.+|+.++..+ +  ||||+++++
T Consensus        39 ~~~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~--hp~iv~~~~  116 (344)
T 1rjb_A           39 KWEFPRENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGS--HENIVNLLG  116 (344)
T ss_dssp             GGBCCGGGEEEEEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC------CHHHHHHHHHHHHHCC--CTTBCCEEE
T ss_pred             CcccCHHHceeeeeecCCCCceeEEeeeeccccCCcceEEEEEecccccCHHHHHHHHHHHHHHHhhcC--CCCeeeEEE
Confidence            5666778899999999999999999984      23568999999754 234456789999999999 7  999999999


Q ss_pred             ceecCCCcccchhhhhhhhhhhhhhhhcccceeeeee-------ecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhc
Q 039630          100 GCIDGPSRILAPLQASIEALFLFTKLWKMDKFISIYV-------VSGSKKNRVKFNWIARREIALGIARGLAYIHEE  169 (174)
Q Consensus       100 ~~~~~~~~~lv~~~~~~~~~~l~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~  169 (174)
                      .+...+..++++  ++.+++.|...+...........       ..........+++..++.++.|++.||.|||++
T Consensus       117 ~~~~~~~~~lv~--e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~  191 (344)
T 1rjb_A          117 ACTLSGPIYLIF--EYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFK  191 (344)
T ss_dssp             EECSSSSCEEEE--ECCTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             EEeeCCccEEEE--ecCCCCcHHHHHhhccccccccccchhhhcccccccccccCCHHHHHHHHHHHHHHHHHHHhC
Confidence            999998888888  77777777665433211100000       000001123478999999999999999999985

>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens}

Probab=99.66  E-value=3.5e-16  Score=111.42  Aligned_cols=117  Identities=20%  Similarity=0.287  Sum_probs=95.6

Q ss_pred             CCeeecceecccCCeeEEEEE-EcCCCEEEEEEeeccC---ccchhHHHHHHHHHhcccccCCCeeeeecceecCCCccc
Q 039630           34 NGFRTSNKIGEGGFGSVYKGR-LEDGTVVAVNVLSVES---KQGETEFMSEVASMANINICHENLVKLHGGCIDGPSRIL  109 (174)
Q Consensus        34 ~~~~~~~~lg~G~~g~V~~~~-~~~~~~~avK~~~~~~---~~~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~~~~~~~l  109 (174)
                      ++|.+.+.||+|+||.||++. ..++..||+|++....   ......+.+|+.++..++  ||||+++++.+...+..++
T Consensus        11 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~--h~~i~~~~~~~~~~~~~~l   88 (278)
T 3cok_A           11 EDFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLK--HPSILELYNYFEDSNYVYL   88 (278)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTBC--CTTBCCEEEEEECSSEEEE
T ss_pred             ccceeeeeecCCCceEEEEEEEccCCceEEEEEeehhhhhhhhHHHHHHHHHHHHHhCC--CCCeEeEEEEEccCCeEEE
Confidence            569999999999999999998 4678999999997442   233467889999999999  9999999999999888888


Q ss_pred             chhhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhc
Q 039630          110 APLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEE  169 (174)
Q Consensus       110 v~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~  169 (174)
                      ++  ++.+.+.+...+.               .....+++..+..++.|++.||.|||++
T Consensus        89 v~--e~~~~~~L~~~l~---------------~~~~~~~~~~~~~~~~qi~~~l~~lH~~  131 (278)
T 3cok_A           89 VL--EMCHNGEMNRYLK---------------NRVKPFSENEARHFMHQIITGMLYLHSH  131 (278)
T ss_dssp             EE--ECCTTEEHHHHHH---------------TCSSCCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             EE--ecCCCCcHHHHHh---------------hccCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence            88  6666666654331               1123578999999999999999999975

>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A*

Probab=99.66  E-value=1.5e-16  Score=115.06  Aligned_cols=141  Identities=22%  Similarity=0.269  Sum_probs=102.4

Q ss_pred             hhhHHhhcCCeeecceecccCCeeEEEEEE------cCCCEEEEEEeeccC-ccchhHHHHHHHHHhcccccCCCeeeee
Q 039630           26 YNELKIATNGFRTSNKIGEGGFGSVYKGRL------EDGTVVAVNVLSVES-KQGETEFMSEVASMANINICHENLVKLH   98 (174)
Q Consensus        26 ~~~~~~~~~~~~~~~~lg~G~~g~V~~~~~------~~~~~~avK~~~~~~-~~~~~~~~~e~~~l~~l~~~h~~i~~~~   98 (174)
                      ...+....++|.+.+.||+|+||.||++..      .++..||+|+++... ......+.+|+.+++.++  ||||++++
T Consensus        15 ~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~--hp~iv~~~   92 (314)
T 2ivs_A           15 DPKWEFPRKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVN--HPHVIKLY   92 (314)
T ss_dssp             CTTTBCCGGGEEEEEEEEECSSSEEEEEEEETGGGCSSEEEEEEEECCTTCCHHHHHHHHHHHHHHTTCC--CTTBCCEE
T ss_pred             CcccccchhheeeeeeecccCCeeEEEEEEeccCcccCcceEEEEeccCCCCHHHHHHHHHHHHHHhhCC--CCceeeEE
Confidence            345566678899999999999999999984      234789999997542 334567889999999999  99999999


Q ss_pred             cceecCCCcccchhhhhhhhhhhhhhhhcccceeeeee--------ecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhcc
Q 039630           99 GGCIDGPSRILAPLQASIEALFLFTKLWKMDKFISIYV--------VSGSKKNRVKFNWIARREIALGIARGLAYIHEEI  170 (174)
Q Consensus        99 ~~~~~~~~~~lv~~~~~~~~~~l~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  170 (174)
                      +.+...+..++++  ++.+++.|...+...........        ..........+++..+..++.|++.||.|||++.
T Consensus        93 ~~~~~~~~~~lv~--e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~  170 (314)
T 2ivs_A           93 GACSQDGPLLLIV--EYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEMK  170 (314)
T ss_dssp             EEECSSSSCEEEE--ECCTTCBHHHHHHHTTTSTTEEC----------------CEECHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             EEEecCCceEEEE--eecCCCCHHHHHHHHhhccCCcccccccccccccccccccCcCHHHHHHHHHHHHHHHHHHHHCC
Confidence            9999988888888  77776666654433221100000        0000011234788999999999999999999863

>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ...

Probab=99.66  E-value=1.6e-16  Score=115.36  Aligned_cols=139  Identities=22%  Similarity=0.307  Sum_probs=104.7

Q ss_pred             ceechhhHHhhcCCeeecceecccCCeeEEEEEEc------CCCEEEEEEeeccC-ccchhHHHHHHHHHhcccccCCCe
Q 039630           22 SKISYNELKIATNGFRTSNKIGEGGFGSVYKGRLE------DGTVVAVNVLSVES-KQGETEFMSEVASMANINICHENL   94 (174)
Q Consensus        22 ~~~~~~~~~~~~~~~~~~~~lg~G~~g~V~~~~~~------~~~~~avK~~~~~~-~~~~~~~~~e~~~l~~l~~~h~~i   94 (174)
                      ..+..++|....++|.+.+.||+|+||.||+|...      ++..||+|.+.... ......+.+|+.+++.++  |+||
T Consensus        13 ~~~~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~--h~~i   90 (322)
T 1p4o_A           13 DVYVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFN--CHHV   90 (322)
T ss_dssp             SCCCCCTTBCCGGGEEEEEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTSCHHHHHHHHHHHHHGGGCC--CTTB
T ss_pred             cccChhhhcchhhheeeeeEeccCCceEEEeeeecCccCCCCceEEEEEecccccCHHHHHHHHHHHHHHHhcC--CCCE
Confidence            34556778888889999999999999999999843      46789999997542 234556889999999999  9999


Q ss_pred             eeeecceecCCCcccchhhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhcc
Q 039630           95 VKLHGGCIDGPSRILAPLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEI  170 (174)
Q Consensus        95 ~~~~~~~~~~~~~~lv~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  170 (174)
                      +++++.+...+..++++  ++.+++.+...+........      .......+++..+..++.|++.||.|||++.
T Consensus        91 ~~~~~~~~~~~~~~lv~--e~~~~~~L~~~l~~~~~~~~------~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~  158 (322)
T 1p4o_A           91 VRLLGVVSQGQPTLVIM--ELMTRGDLKSYLRSLRPAMA------NNPVLAPPSLSKMIQMAGEIADGMAYLNANK  158 (322)
T ss_dssp             CCEEEEECSSSSCEEEE--ECCTTCBHHHHHHHHHHHHH------HCTTCCCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             eeeEEEEccCCccEEEE--EeCCCCcHHHHHHHhchhhc------cCCCCCCcCHHHHHHHHHHHHHHHHHHHHCC
Confidence            99999999888888888  77666666553322110000      0011134688899999999999999999863

>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A*

Probab=99.66  E-value=2.9e-16  Score=113.46  Aligned_cols=140  Identities=19%  Similarity=0.292  Sum_probs=102.1

Q ss_pred             hhHHhhcCCeeecceecccCCeeEEEEEE------cCCCEEEEEEeeccC-ccchhHHHHHHHHHhcc-cccCCCeeeee
Q 039630           27 NELKIATNGFRTSNKIGEGGFGSVYKGRL------EDGTVVAVNVLSVES-KQGETEFMSEVASMANI-NICHENLVKLH   98 (174)
Q Consensus        27 ~~~~~~~~~~~~~~~lg~G~~g~V~~~~~------~~~~~~avK~~~~~~-~~~~~~~~~e~~~l~~l-~~~h~~i~~~~   98 (174)
                      ..+....++|.+.+.||+|+||.||++..      .++..||+|+++... ....+.+.+|+.++..+ +  ||||++++
T Consensus        16 ~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~--h~~i~~~~   93 (313)
T 1t46_A           16 HKWEFPRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGN--HMNIVNLL   93 (313)
T ss_dssp             GGGBCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCC--CTTBCCEE
T ss_pred             cccccChhhhhHHHhhCccCCcceEEEEEeeccccchhhhhHHHhcCcchhHHHHHHHHHHHHHHhhccc--CCCeeeEE
Confidence            34666678899999999999999999984      246789999997553 23456789999999999 7  99999999


Q ss_pred             cceecCCCcccchhhhhhhhhhhhhhhhcccceeee--eeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhcc
Q 039630           99 GGCIDGPSRILAPLQASIEALFLFTKLWKMDKFISI--YVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEI  170 (174)
Q Consensus        99 ~~~~~~~~~~lv~~~~~~~~~~l~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  170 (174)
                      +.+...+..++++  ++.+++.+...+.........  ............+++..++.++.|++.||.|||++.
T Consensus        94 ~~~~~~~~~~lv~--e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~  165 (313)
T 1t46_A           94 GACTIGGPTLVIT--EYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKN  165 (313)
T ss_dssp             EEECSSSSCEEEE--ECCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             EEEecCCCcEEEE--ecCCCCCHHHHHHhcccccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            9999998888888  777776766544322110000  000000112235889999999999999999999863

>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A*

Probab=99.66  E-value=2.7e-16  Score=120.43  Aligned_cols=117  Identities=22%  Similarity=0.334  Sum_probs=97.3

Q ss_pred             CCeeecceecccCCeeEEEEE-EcCCCEEEEEEeecc--CccchhHHHHHHHHHhcccccCCCeeeeecceecCCCcccc
Q 039630           34 NGFRTSNKIGEGGFGSVYKGR-LEDGTVVAVNVLSVE--SKQGETEFMSEVASMANINICHENLVKLHGGCIDGPSRILA  110 (174)
Q Consensus        34 ~~~~~~~~lg~G~~g~V~~~~-~~~~~~~avK~~~~~--~~~~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~~~~~~~lv  110 (174)
                      ++|.+.+.||+|+||.||++. ..++..||+|++...  .......+.+|+.+++.++  ||||+++++++...+..+++
T Consensus        22 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~--hpniv~~~~~~~~~~~~~lv   99 (486)
T 3mwu_A           22 ERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLD--HPNIMKLFEILEDSSSFYIV   99 (486)
T ss_dssp             HHEEEEEEEECCSSSEEEEEEETTTCCEEEEEEEEHHHHBCSCHHHHHHHHHHHHHCC--CTTBCCEEEEEECSSEEEEE
T ss_pred             cceEEeEEEeecCCEEEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHHHhCC--CCCcCeEEEEEEcCCEEEEE
Confidence            459999999999999999999 457899999999754  2345677899999999999  99999999999998888888


Q ss_pred             hhhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhcc
Q 039630          111 PLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEI  170 (174)
Q Consensus       111 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  170 (174)
                      +  ++..++.+...+..                ...+++..+..++.|++.||.|||++.
T Consensus       100 ~--e~~~~~~L~~~~~~----------------~~~~~~~~~~~i~~qi~~al~~lH~~~  141 (486)
T 3mwu_A          100 G--ELYTGGELFDEIIK----------------RKRFSEHDAARIIKQVFSGITYMHKHN  141 (486)
T ss_dssp             E--CCCCSCBHHHHHHH----------------HSSCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             E--EcCCCCcHHHHHHh----------------cCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            8  77776666554321                234788999999999999999999864

>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A*

Probab=99.66  E-value=6.8e-16  Score=110.38  Aligned_cols=117  Identities=34%  Similarity=0.549  Sum_probs=92.7

Q ss_pred             cCCeeecceecccCCeeEEEEEE-cCCCEEEEEEeeccCccc-------hhHHHHHHHHHhcccccCCCeeeeecceecC
Q 039630           33 TNGFRTSNKIGEGGFGSVYKGRL-EDGTVVAVNVLSVESKQG-------ETEFMSEVASMANINICHENLVKLHGGCIDG  104 (174)
Q Consensus        33 ~~~~~~~~~lg~G~~g~V~~~~~-~~~~~~avK~~~~~~~~~-------~~~~~~e~~~l~~l~~~h~~i~~~~~~~~~~  104 (174)
                      .++|++.+.||+|+||.||++.. .++..||+|++.......       ...+.+|+.++..++  |+||+++++.+...
T Consensus        18 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~--h~~i~~~~~~~~~~   95 (287)
T 4f0f_A           18 DNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLN--HPNIVKLYGLMHNP   95 (287)
T ss_dssp             STTEEEEEECCCCSSSCEEEEEETTTCCEEEEEECCCCTTTCCHHHHCCSHHHHHHHHHHTTCC--CTTBCCEEEEETTT
T ss_pred             hccceehhccccCCceeEEEEEEcCCceEEEEEEeeccccccchhHHHHHHHHHHHHHHHHhCC--CCCchhhheeecCC
Confidence            36799999999999999999994 678999999997543221       257889999999999  99999999998655


Q ss_pred             CCcccchhhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhcc
Q 039630          105 PSRILAPLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEI  170 (174)
Q Consensus       105 ~~~~lv~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  170 (174)
                      .  ++++  ++.+++.+...+.               .....+++..+..++.|++.||.|||++.
T Consensus        96 ~--~lv~--e~~~~~~L~~~l~---------------~~~~~~~~~~~~~~~~~l~~~l~~lH~~~  142 (287)
T 4f0f_A           96 P--RMVM--EFVPCGDLYHRLL---------------DKAHPIKWSVKLRLMLDIALGIEYMQNQN  142 (287)
T ss_dssp             T--EEEE--ECCTTCBHHHHHH---------------CTTSCCCHHHHHHHHHHHHHHHHHHHTSS
T ss_pred             C--eEEE--EecCCCCHHHHHh---------------cccCCccHHHHHHHHHHHHHHHHHHHhCC
Confidence            4  4666  6666666655331               12235789999999999999999999976

>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens}

Probab=99.66  E-value=4.8e-16  Score=122.10  Aligned_cols=121  Identities=23%  Similarity=0.326  Sum_probs=94.5

Q ss_pred             HhhcCCeeecc-eecccCCeeEEEEEEc---CCCEEEEEEeeccC-ccchhHHHHHHHHHhcccccCCCeeeeecceecC
Q 039630           30 KIATNGFRTSN-KIGEGGFGSVYKGRLE---DGTVVAVNVLSVES-KQGETEFMSEVASMANINICHENLVKLHGGCIDG  104 (174)
Q Consensus        30 ~~~~~~~~~~~-~lg~G~~g~V~~~~~~---~~~~~avK~~~~~~-~~~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~~~  104 (174)
                      .....++.+.+ .||+|+||.||+|...   ++..||||+++... ......+.+|+.+++.++  |+||+++++++.. 
T Consensus       331 ~~~~~~~~~~~~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~il~~l~--hpniv~l~~~~~~-  407 (613)
T 2ozo_A          331 FLKRDNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLD--NPYIVRLIGVCQA-  407 (613)
T ss_dssp             BCCTTSEEEEEEEEEECSSSEEEEEEEECSSCEEEEEEEECCCCCSSTTHHHHHHHHHHHTTCC--CTTBCCEEEEEES-
T ss_pred             eccccceeEcCcEEecCCCcEEEEEEEecCCCcEEEEEEEcCCCCChHHHHHHHHHHHHHHhCC--CCCEeeEEEEecc-
Confidence            33445566555 8999999999999853   45679999997653 345678999999999999  9999999999876 


Q ss_pred             CCcccchhhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhcc
Q 039630          105 PSRILAPLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEI  170 (174)
Q Consensus       105 ~~~~lv~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  170 (174)
                      +..++|+  ++..++.|...+.               .....+++..+..++.||+.||+|||++.
T Consensus       408 ~~~~lv~--E~~~~g~L~~~l~---------------~~~~~l~~~~~~~i~~qi~~~L~~LH~~~  456 (613)
T 2ozo_A          408 EALMLVM--EMAGGGPLHKFLV---------------GKREEIPVSNVAELLHQVSMGMKYLEEKN  456 (613)
T ss_dssp             SSEEEEE--ECCTTCBHHHHHT---------------TCTTTSCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             CCeEEEE--EeCCCCcHHHHHh---------------hccCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            5577777  7777777665431               12335889999999999999999999863

>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*

Probab=99.66  E-value=4.1e-16  Score=119.32  Aligned_cols=118  Identities=23%  Similarity=0.364  Sum_probs=97.9

Q ss_pred             cCCeeecceecccCCeeEEEEE-EcCCCEEEEEEeeccC---ccchhHHHHHHHHHhcccccCCCeeeeecceecCCCcc
Q 039630           33 TNGFRTSNKIGEGGFGSVYKGR-LEDGTVVAVNVLSVES---KQGETEFMSEVASMANINICHENLVKLHGGCIDGPSRI  108 (174)
Q Consensus        33 ~~~~~~~~~lg~G~~g~V~~~~-~~~~~~~avK~~~~~~---~~~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~~~~~~~  108 (174)
                      .+.|++.+.||+|+||.||+|. ..++..||+|++....   ......+.+|+.+++.++  ||||+++++++...+..+
T Consensus        25 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~--hpniv~~~~~~~~~~~~~  102 (484)
T 3nyv_A           25 SDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLD--HPNIMKLYEFFEDKGYFY  102 (484)
T ss_dssp             HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCBSSCHHHHHHHHHHHTTCC--CTTBCCEEEEEECSSEEE
T ss_pred             cCceEEeeEEecCCCEEEEEEEECCCCCEEEEEEEEhhhcccchHHHHHHHHHHHHHhCC--CCCCCcEEEEEEeCCEEE
Confidence            3569999999999999999999 4578999999997552   345677899999999999  999999999999988888


Q ss_pred             cchhhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhcc
Q 039630          109 LAPLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEI  170 (174)
Q Consensus       109 lv~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  170 (174)
                      +++  ++..++.+...+.                ....+++..+..++.|++.||.|||++.
T Consensus       103 lv~--e~~~~~~L~~~~~----------------~~~~~~~~~~~~i~~qi~~~l~~lH~~~  146 (484)
T 3nyv_A          103 LVG--EVYTGGELFDEII----------------SRKRFSEVDAARIIRQVLSGITYMHKNK  146 (484)
T ss_dssp             EEE--CCCCSCBHHHHHH----------------TCSCCBHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             EEE--ecCCCCCHHHHHH----------------hcCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            888  7776666655432                1234788999999999999999999864

>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ...

Probab=99.66  E-value=4.5e-16  Score=110.60  Aligned_cols=117  Identities=20%  Similarity=0.274  Sum_probs=95.3

Q ss_pred             CCeeecceecccCCeeEEEEEE-cCCCEEEEEEeeccC-ccchhHHHHHHHHHhcccccCCCeeeeecceecCCCcccch
Q 039630           34 NGFRTSNKIGEGGFGSVYKGRL-EDGTVVAVNVLSVES-KQGETEFMSEVASMANINICHENLVKLHGGCIDGPSRILAP  111 (174)
Q Consensus        34 ~~~~~~~~lg~G~~g~V~~~~~-~~~~~~avK~~~~~~-~~~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~~~~~~~lv~  111 (174)
                      ++|++.+.||+|+||.||++.. .++..+|+|+++... ......+.+|+.+++.++  |+||+++++.+...+..++++
T Consensus         7 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~--h~~i~~~~~~~~~~~~~~lv~   84 (276)
T 2yex_A            7 EDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLN--HENVVKFYGHRREGNIQYLFL   84 (276)
T ss_dssp             HHEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGCTTHHHHHHHHHHHHHTCC--CTTBCCEEEEEEETTEEEEEE
T ss_pred             cceEEEEEeecCCCcEEEEEEECCCCcEEEEEEeeeccchhhhHHHHHHHHHHHhcC--CCCceeeeeEEEcCCEEEEEE
Confidence            4689999999999999999994 478999999997543 334567899999999999  999999999999888888887


Q ss_pred             hhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhcc
Q 039630          112 LQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEI  170 (174)
Q Consensus       112 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  170 (174)
                        ++.+++.+...+                .....+++..+..++.|++.||.|||++.
T Consensus        85 --e~~~~~~L~~~l----------------~~~~~~~~~~~~~~~~~i~~~l~~lH~~~  125 (276)
T 2yex_A           85 --EYCSGGELFDRI----------------EPDIGMPEPDAQRFFHQLMAGVVYLHGIG  125 (276)
T ss_dssp             --ECCTTEEGGGGS----------------BTTTBCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             --EecCCCcHHHHH----------------hhccCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence              666665554422                12235789999999999999999999853

>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens}

Probab=99.66  E-value=5.2e-16  Score=112.16  Aligned_cols=117  Identities=19%  Similarity=0.232  Sum_probs=94.7

Q ss_pred             CCeeecceecccCCeeEEEEEE-cCCCEEEEEEeeccCc--cchhHHHHHHHHHhcccccCCCeeeeecceecCCCcccc
Q 039630           34 NGFRTSNKIGEGGFGSVYKGRL-EDGTVVAVNVLSVESK--QGETEFMSEVASMANINICHENLVKLHGGCIDGPSRILA  110 (174)
Q Consensus        34 ~~~~~~~~lg~G~~g~V~~~~~-~~~~~~avK~~~~~~~--~~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~~~~~~~lv  110 (174)
                      ++|++.+.||+|+||.||++.. .++..+|+|.+.....  .....+.+|+.++..++  |+||+++++.+...+..+++
T Consensus         3 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~--h~~i~~~~~~~~~~~~~~lv   80 (311)
T 4agu_A            3 EKYEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLK--HPNLVNLLEVFRRKRRLHLV   80 (311)
T ss_dssp             CCEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECCCCC-HHHHHHHHHHHHHHHHCC--CTTBCCEEEEEEETTEEEEE
T ss_pred             ccceEeeEEeecCCeEEEEEEeCCCCcEEEEEEeeccccchHHHHHHHHHHHHHHhCC--CCCccchhheeecCCeEEEE
Confidence            5799999999999999999994 5689999999865432  23456789999999999  99999999999998888888


Q ss_pred             hhhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhcc
Q 039630          111 PLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEI  170 (174)
Q Consensus       111 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  170 (174)
                      +  ++.+++.+....                .....+++..+..++.|++.||.|||++.
T Consensus        81 ~--e~~~~~~l~~~~----------------~~~~~~~~~~~~~i~~~l~~~l~~lH~~~  122 (311)
T 4agu_A           81 F--EYCDHTVLHELD----------------RYQRGVPEHLVKSITWQTLQAVNFCHKHN  122 (311)
T ss_dssp             E--ECCSEEHHHHHH----------------HTSSCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             E--EeCCCchHHHHH----------------hhhcCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            8  666666554422                11234788999999999999999999863

>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens}

Probab=99.66  E-value=6.5e-16  Score=115.49  Aligned_cols=121  Identities=21%  Similarity=0.243  Sum_probs=94.9

Q ss_pred             cCCeeecceecccCCeeEEEEEE-cCCCEEEEEEeeccC-ccchhHHHHHHHHHhcccccCCCeeeeecceecCC--Ccc
Q 039630           33 TNGFRTSNKIGEGGFGSVYKGRL-EDGTVVAVNVLSVES-KQGETEFMSEVASMANINICHENLVKLHGGCIDGP--SRI  108 (174)
Q Consensus        33 ~~~~~~~~~lg~G~~g~V~~~~~-~~~~~~avK~~~~~~-~~~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~~~~--~~~  108 (174)
                      .+.|.+.+.||+|+||.||+|.. .++..||+|+++... ......+.+|+.+++.++  |+||+++++++...+  ..+
T Consensus         8 ~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~--hpnIv~~~~~~~~~~~~~~~   85 (396)
T 4eut_A            8 NHLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLN--HKNIVKLFAIEEETTTRHKV   85 (396)
T ss_dssp             SEEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCC--CTTBCCEEEEEECTTTCCEE
T ss_pred             CCceEEEEEEEcCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhcC--CCCCCeEEEeeccCCCCeeE
Confidence            35699999999999999999994 568999999997542 344567889999999999  999999999988765  456


Q ss_pred             cchhhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhcc
Q 039630          109 LAPLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEI  170 (174)
Q Consensus       109 lv~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  170 (174)
                      +++  ++.+++.+...+..             ......+++..++.++.|++.||+|||++.
T Consensus        86 lv~--e~~~~g~L~~~l~~-------------~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~  132 (396)
T 4eut_A           86 LIM--EFCPCGSLYTVLEE-------------PSNAYGLPESEFLIVLRDVVGGMNHLRENG  132 (396)
T ss_dssp             EEE--CCCTTEEHHHHTTS-------------GGGTTCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             EEE--ecCCCCCHHHHHHh-------------hhcccCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            666  77766666553311             111223889999999999999999999863

>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A

Probab=99.66  E-value=4.1e-16  Score=112.46  Aligned_cols=117  Identities=19%  Similarity=0.281  Sum_probs=93.3

Q ss_pred             CCeeecceecccCCeeEEEEEE-cCCCEEEEEEeeccCccchhHHHHHHHHHhcccccCCCeeeeecceecCCCcccchh
Q 039630           34 NGFRTSNKIGEGGFGSVYKGRL-EDGTVVAVNVLSVESKQGETEFMSEVASMANINICHENLVKLHGGCIDGPSRILAPL  112 (174)
Q Consensus        34 ~~~~~~~~lg~G~~g~V~~~~~-~~~~~~avK~~~~~~~~~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~~~~~~~lv~~  112 (174)
                      ++|.+.+.||+|+||.||++.. .+++.+|+|+++.........+.+|+.++..++  ||||+++++.+...+..++++ 
T Consensus         9 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~--h~~i~~~~~~~~~~~~~~lv~-   85 (304)
T 2jam_A            9 KTFIFMEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFRDSSLENEIAVLKKIK--HENIVTLEDIYESTTHYYLVM-   85 (304)
T ss_dssp             HHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECC------HHHHHHHHHHHCC--CTTBCCEEEEEECSSEEEEEE-
T ss_pred             ccceeeeeccCCCCceEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHhCC--CCCeeehhhhcccCCEEEEEE-
Confidence            5689999999999999999994 578999999998654444567889999999999  999999999999888888888 


Q ss_pred             hhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhcc
Q 039630          113 QASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEI  170 (174)
Q Consensus       113 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  170 (174)
                       ++.+++.+...+.                ....+++..+..++.|++.||.|||++.
T Consensus        86 -e~~~~~~L~~~l~----------------~~~~~~~~~~~~~~~qi~~~l~~lH~~~  126 (304)
T 2jam_A           86 -QLVSGGELFDRIL----------------ERGVYTEKDASLVIQQVLSAVKYLHENG  126 (304)
T ss_dssp             -CCCCSCBHHHHHH----------------HHSCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             -EcCCCccHHHHHH----------------HcCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence             6666666654331                1224788899999999999999999864

>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0

Probab=99.65  E-value=4.6e-16  Score=110.33  Aligned_cols=117  Identities=27%  Similarity=0.359  Sum_probs=91.8

Q ss_pred             hcCCeeecceecccCCeeEEEEEEcCCCEEEEEEeeccC----ccchhHHHHHHHHHhcccccCCCeeeeecceecCCCc
Q 039630           32 ATNGFRTSNKIGEGGFGSVYKGRLEDGTVVAVNVLSVES----KQGETEFMSEVASMANINICHENLVKLHGGCIDGPSR  107 (174)
Q Consensus        32 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~avK~~~~~~----~~~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~~~~~~  107 (174)
                      ..++|+..+.||+|+||.||++... +..+|+|+++...    ....+.+.+|+.+++.++  |+||+++++.+...+..
T Consensus         5 ~~~~~~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~--h~~i~~~~~~~~~~~~~   81 (271)
T 3dtc_A            5 DFAELTLEEIIGIGGFGKVYRAFWI-GDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLK--HPNIIALRGVCLKEPNL   81 (271)
T ss_dssp             CTTSEEEEEEEEEETTEEEEEEEET-TEEEEEEEC----------CHHHHHHHHHHHHHCC--CTTBCCEEEEECCC--C
T ss_pred             chhheeeeeeeccCCCeEEEEEEEc-CCeEEEEEEecCCcccHHHHHHHHHHHHHHHHhcC--CCCEeeEEEEEecCCce
Confidence            3467999999999999999999865 8889999997542    223567889999999999  99999999999998888


Q ss_pred             ccchhhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhcc
Q 039630          108 ILAPLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEI  170 (174)
Q Consensus       108 ~lv~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  170 (174)
                      ++++  ++.+++.+...+                 ....+++..+..++.|++.||.|||++.
T Consensus        82 ~lv~--e~~~~~~L~~~~-----------------~~~~~~~~~~~~i~~~l~~~l~~lH~~~  125 (271)
T 3dtc_A           82 CLVM--EFARGGPLNRVL-----------------SGKRIPPDILVNWAVQIARGMNYLHDEA  125 (271)
T ss_dssp             EEEE--ECCTTEEHHHHH-----------------TSSCCCHHHHHHHHHHHHHHHHHHHHSS
T ss_pred             EEEE--EcCCCCCHHHHh-----------------hcCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            8888  666666654422                 1225788999999999999999999975

>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A

Probab=99.65  E-value=6e-16  Score=112.49  Aligned_cols=116  Identities=20%  Similarity=0.283  Sum_probs=95.4

Q ss_pred             CCeeecceecccCCeeEEEEE-EcCCCEEEEEEeeccCcc------chhHHHHHHHHHhcccccCCCeeeeecceecCCC
Q 039630           34 NGFRTSNKIGEGGFGSVYKGR-LEDGTVVAVNVLSVESKQ------GETEFMSEVASMANINICHENLVKLHGGCIDGPS  106 (174)
Q Consensus        34 ~~~~~~~~lg~G~~g~V~~~~-~~~~~~~avK~~~~~~~~------~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~~~~~  106 (174)
                      +.|.+.+.||+|+||.||++. ..++..+|+|+++.....      ....+.+|+.++..+.  ||||+++++.+...+.
T Consensus        12 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~--h~~iv~~~~~~~~~~~   89 (321)
T 2a2a_A           12 DFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVL--HHNVITLHDVYENRTD   89 (321)
T ss_dssp             HHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSSSCSSSBCHHHHHHHHHHHHHCC--CTTBCCEEEEEECSSE
T ss_pred             ccEEEeeEeeecCCEEEEEEEECCCCeEEEEEEEecccccccccchhHHHHHHHHHHHHhCC--CCCcceEEEEEecCCE
Confidence            459999999999999999999 457899999999755221      3567899999999999  9999999999999888


Q ss_pred             cccchhhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhc
Q 039630          107 RILAPLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEE  169 (174)
Q Consensus       107 ~~lv~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~  169 (174)
                      .++++  ++.+++.+...+.                ....+++..+..++.|++.||.|||++
T Consensus        90 ~~lv~--e~~~~~~L~~~l~----------------~~~~~~~~~~~~i~~qi~~aL~~lH~~  134 (321)
T 2a2a_A           90 VVLIL--ELVSGGELFDFLA----------------QKESLSEEEATSFIKQILDGVNYLHTK  134 (321)
T ss_dssp             EEEEE--CCCCSCBHHHHHH----------------TCSCEEHHHHHHHHHHHHHHHHHHHHT
T ss_pred             EEEEE--EcCCCCcHHHHHH----------------hcCCCCHHHHHHHHHHHHHHHHHHHhC
Confidence            88888  7666666655331                123478889999999999999999985

>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens}

Probab=99.65  E-value=3.1e-16  Score=114.02  Aligned_cols=133  Identities=23%  Similarity=0.305  Sum_probs=99.5

Q ss_pred             cccceechhhHHhhcCCeeecceecccCCeeEEEEEE-cCCCEEEEEEeeccCccchhHHHHHHHHHhcc-cccCCCeee
Q 039630           19 YKFSKISYNELKIATNGFRTSNKIGEGGFGSVYKGRL-EDGTVVAVNVLSVESKQGETEFMSEVASMANI-NICHENLVK   96 (174)
Q Consensus        19 ~~~~~~~~~~~~~~~~~~~~~~~lg~G~~g~V~~~~~-~~~~~~avK~~~~~~~~~~~~~~~e~~~l~~l-~~~h~~i~~   96 (174)
                      .....+....+....+.|++.+.||+|+||.||+|.. .+++.||+|++... ......+.+|+.++..+ .  |+||++
T Consensus         9 ~~~~~~~~~~l~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~-~~~~~~~~~e~~~l~~l~~--h~~i~~   85 (326)
T 2x7f_A            9 RSLDEIDLSALRDPAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVT-GDEEEEIKQEINMLKKYSH--HRNIAT   85 (326)
T ss_dssp             -------CCCCCCCTTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC-SSTTHHHHHHHHHHHHHCC--STTBCC
T ss_pred             CcchhccchhccCCCCcEEEEEEeccCCCEEEEEEEECCCCCeEEEEEEecC-cccHHHHHHHHHHHHhccC--CCCeee
Confidence            3345566677777788999999999999999999994 57899999999754 23456788999999998 6  999999


Q ss_pred             eecceecC------CCcccchhhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhcc
Q 039630           97 LHGGCIDG------PSRILAPLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEI  170 (174)
Q Consensus        97 ~~~~~~~~------~~~~lv~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  170 (174)
                      +++.+...      +..++++  ++.+++.+...+..              .....+++..+..++.|++.||.|||++.
T Consensus        86 ~~~~~~~~~~~~~~~~~~lv~--e~~~~~~L~~~l~~--------------~~~~~~~~~~~~~i~~qi~~~l~~lH~~~  149 (326)
T 2x7f_A           86 YYGAFIKKNPPGMDDQLWLVM--EFCGAGSVTDLIKN--------------TKGNTLKEEWIAYICREILRGLSHLHQHK  149 (326)
T ss_dssp             EEEEEEECC--CCCCEEEEEE--ECCTTEEHHHHHHH--------------SGGGCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             eeeEEeeccCccccceEEEEE--EcCCCCcHHHHHHh--------------cccCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            99999773      4566666  66666555543311              11235788889999999999999999864

>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens}

Probab=99.65  E-value=2.6e-16  Score=115.45  Aligned_cols=119  Identities=15%  Similarity=0.208  Sum_probs=95.1

Q ss_pred             hhcCCeeecceecccCCeeEEEEEEcCCCEEEEEEeeccC--ccchhHHHHHHHHHhcccccC--CCeeeeecceecCCC
Q 039630           31 IATNGFRTSNKIGEGGFGSVYKGRLEDGTVVAVNVLSVES--KQGETEFMSEVASMANINICH--ENLVKLHGGCIDGPS  106 (174)
Q Consensus        31 ~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~avK~~~~~~--~~~~~~~~~e~~~l~~l~~~h--~~i~~~~~~~~~~~~  106 (174)
                      ...+.|++.+.||+|+||.||++...++..||+|++....  ......+.+|+.++..+.  |  +||+++++++...+.
T Consensus         6 ~~~~~y~i~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~--~~~~~iv~~~~~~~~~~~   83 (343)
T 3dbq_A            6 VKGRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQ--QHSDKIIRLYDYEITDQY   83 (343)
T ss_dssp             SSSCEEEEEEEESCCSSEEEEEEECTTSCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHT--TTCTTBCCEEEEEECSSE
T ss_pred             eecCEEEEEEEEecCCCeEEEEEEeCCCCEEEEEEeeccccchHHHHHHHHHHHHHHhhh--hcCCceEEEeeeEeeCCE
Confidence            3456799999999999999999997778999999997553  233467889999999997  5  999999999999888


Q ss_pred             cccchhhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhcc
Q 039630          107 RILAPLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEI  170 (174)
Q Consensus       107 ~~lv~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  170 (174)
                      .++++  + ...+.+...+.                ....+++..+..++.|++.||.|||++.
T Consensus        84 ~~lv~--e-~~~~~L~~~l~----------------~~~~~~~~~~~~i~~qi~~al~~lH~~~  128 (343)
T 3dbq_A           84 IYMVM--E-CGNIDLNSWLK----------------KKKSIDPWERKSYWKNMLEAVHTIHQHG  128 (343)
T ss_dssp             EEEEE--C-CCSEEHHHHHH----------------HSCCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             EEEEE--e-CCCCCHHHHHH----------------hcCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            88888  4 23344444321                1234788899999999999999999864

>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus}

Probab=99.65  E-value=2.5e-16  Score=114.44  Aligned_cols=130  Identities=22%  Similarity=0.360  Sum_probs=89.9

Q ss_pred             hhHHhhcCCeeecceecccCCeeEEEEEE-cCC---CEEEEEEeecc--CccchhHHHHHHHHHhcccccCCCeeeeecc
Q 039630           27 NELKIATNGFRTSNKIGEGGFGSVYKGRL-EDG---TVVAVNVLSVE--SKQGETEFMSEVASMANINICHENLVKLHGG  100 (174)
Q Consensus        27 ~~~~~~~~~~~~~~~lg~G~~g~V~~~~~-~~~---~~~avK~~~~~--~~~~~~~~~~e~~~l~~l~~~h~~i~~~~~~  100 (174)
                      +++....++|.+.+.||+|+||.||+|.. .++   ..||+|+++..  .......+.+|+.+++.++  |+||++++++
T Consensus        16 ~~~~i~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~--h~~iv~~~~~   93 (323)
T 3qup_A           16 EDVLIPEQQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEFD--HPHVAKLVGV   93 (323)
T ss_dssp             CTTBCC---CEEEEEEEEETTEEEEEEEC-------CEEEEEEC------CHHHHHHHHHHHHHTTCC--CTTBCCCCEE
T ss_pred             hhcccChhHeEEeceecccCCeEEEEEEEcccCCcceeEEEEEecccccCHHHHHHHHHHHHHHHHCC--CCceehhhce
Confidence            44555667899999999999999999983 333   37999999755  3344677899999999999  9999999999


Q ss_pred             eecCCCc------ccchhhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhcc
Q 039630          101 CIDGPSR------ILAPLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEI  170 (174)
Q Consensus       101 ~~~~~~~------~lv~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  170 (174)
                      +......      ++++  ++.+++.+...+....          .......+++..+..++.|++.||.|||++.
T Consensus        94 ~~~~~~~~~~~~~~~v~--e~~~~~~L~~~l~~~~----------~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~  157 (323)
T 3qup_A           94 SLRSRAKGRLPIPMVIL--PFMKHGDLHAFLLASR----------IGENPFNLPLQTLVRFMVDIACGMEYLSSRN  157 (323)
T ss_dssp             EECC-------CEEEEE--ECCTTCBHHHHHHHHH----------C---CCCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             eeccccccCCCccEEEE--EeccCCcHHHHHHhhh----------ccccccccCHHHHHHHHHHHHHHHHHHHcCC
Confidence            9877554      6666  6666665554332110          0111224789999999999999999999864

>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A*

Probab=99.65  E-value=9e-16  Score=111.79  Aligned_cols=126  Identities=24%  Similarity=0.346  Sum_probs=95.0

Q ss_pred             hcCCeeecceecccCCeeEEEEEE------cCCCEEEEEEeecc-CccchhHHHHHHHHHhcccccCCCeeeeecceecC
Q 039630           32 ATNGFRTSNKIGEGGFGSVYKGRL------EDGTVVAVNVLSVE-SKQGETEFMSEVASMANINICHENLVKLHGGCIDG  104 (174)
Q Consensus        32 ~~~~~~~~~~lg~G~~g~V~~~~~------~~~~~~avK~~~~~-~~~~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~~~  104 (174)
                      ..++|.+.+.||+|+||.||++..      .++..||+|.+... .......+.+|+.+++.++  |+||+++++.+...
T Consensus        28 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~--h~~iv~~~~~~~~~  105 (327)
T 2yfx_A           28 PRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFN--HQNIVRCIGVSLQS  105 (327)
T ss_dssp             CGGGCEEEEECC--CSSCEEEEEC--------CCEEEEEECCSSCCHHHHHHHHHHHHHHHHCC--CTTBCCEEEEECSS
T ss_pred             ChhheEEEEEEcCCCCeeEEEEEEcCCCCCCccceEEEEEeccccchhhHHHHHHHHHHHhhCC--CCCCCeEEEEEcCC
Confidence            446799999999999999999983      34678999999744 2334557889999999998  99999999999998


Q ss_pred             CCcccchhhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhcc
Q 039630          105 PSRILAPLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEI  170 (174)
Q Consensus       105 ~~~~lv~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  170 (174)
                      +..++++  ++.+++.|...+.....         .......+++..++.++.|++.||.|||++.
T Consensus       106 ~~~~lv~--e~~~~~~L~~~l~~~~~---------~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~  160 (327)
T 2yfx_A          106 LPRFILM--ELMAGGDLKSFLRETRP---------RPSQPSSLAMLDLLHVARDIACGCQYLEENH  160 (327)
T ss_dssp             SSCEEEE--ECCTTEEHHHHHHHTSC---------CSSSTTSCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             CCcEEEE--ecCCCCcHHHHHHhhcc---------cccccccccHHHHHHHHHHHHHHHHHHhhCC
Confidence            8888888  77766666554422110         0112235788999999999999999999863

>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ...

Probab=99.65  E-value=6.6e-16  Score=111.76  Aligned_cols=145  Identities=18%  Similarity=0.236  Sum_probs=102.2

Q ss_pred             eechhhHHhhcCCeeecceecccCCeeEEEEEE------cCCCEEEEEEeeccC-ccchhHHHHHHHHHhcccccCCCee
Q 039630           23 KISYNELKIATNGFRTSNKIGEGGFGSVYKGRL------EDGTVVAVNVLSVES-KQGETEFMSEVASMANINICHENLV   95 (174)
Q Consensus        23 ~~~~~~~~~~~~~~~~~~~lg~G~~g~V~~~~~------~~~~~~avK~~~~~~-~~~~~~~~~e~~~l~~l~~~h~~i~   95 (174)
                      .+....+....++|++.+.||+|+||.||++..      .+++.||+|+++... ......+.+|+.++..+. .||||+
T Consensus        16 ~~~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~-~hp~iv   94 (316)
T 2xir_A           16 PYDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIG-HHLNVV   94 (316)
T ss_dssp             CCCHHHHBCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHC-CCTTBC
T ss_pred             cccccceecchhheeeeeEEcCCCceeEEEEEEecCCccccceEEEEEecccCCCcHHHHHHHHHHHHHHhcc-cCCCee
Confidence            345567777788999999999999999999983      245789999997553 234557889999999993 389999


Q ss_pred             eeecceecCCC-cccchhhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhcc
Q 039630           96 KLHGGCIDGPS-RILAPLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEI  170 (174)
Q Consensus        96 ~~~~~~~~~~~-~~lv~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  170 (174)
                      ++++.+...+. .++++  ++.+++.+...+.....................+++..+..++.|++.||.|||++.
T Consensus        95 ~~~~~~~~~~~~~~lv~--e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~  168 (316)
T 2xir_A           95 NLLGACTKPGGPLMVIV--EFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRK  168 (316)
T ss_dssp             CEEEEECCTTSCCEEEE--ECCTTEEHHHHHHTCTTSEECC-------CTTCEEHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             eEEEEEecCCCceEEEE--EcCCCCcHHHHHHhcccccccccccchhhhccccCHHHHHHHHHHHHHHHHHHHhCC
Confidence            99999877544 67777  777766666544322111000000000011223788999999999999999999864

>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A*

Probab=99.65  E-value=1.7e-16  Score=115.53  Aligned_cols=120  Identities=29%  Similarity=0.368  Sum_probs=93.5

Q ss_pred             hhHHhhcCCeeecceecccCCeeEEEEEEcCCCEEEEEEeeccCccchhHHHHHHHHHhcccccCCCeeeeecceecCCC
Q 039630           27 NELKIATNGFRTSNKIGEGGFGSVYKGRLEDGTVVAVNVLSVESKQGETEFMSEVASMANINICHENLVKLHGGCIDGPS  106 (174)
Q Consensus        27 ~~~~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~avK~~~~~~~~~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~~~~~  106 (174)
                      .++....++|++.+.||+|+||.||+|... +..||+|+++... ........|+.++..++  ||||+++++++.....
T Consensus        17 ~n~~~~~~~y~~~~~lg~G~~g~Vy~~~~~-~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~--hpniv~~~~~~~~~~~   92 (322)
T 3soc_A           17 ENLYFQSMPLQLLEVKARGRFGCVWKAQLL-NEYVAVKIFPIQD-KQSWQNEYEVYSLPGMK--HENILQFIGAEKRGTS   92 (322)
T ss_dssp             CCEEETTEEEEEEEEEECSTTCEEEEEEET-TEEEEEEEECGGG-HHHHHHHHHHHTSTTCC--CTTBCCEEEEEEEECS
T ss_pred             cccccchhhchhhheecccCceEEEEEEEC-CCEEEEEEeecCc-hHHHHHHHHHHHHhcCC--CCCchhhcceeccCCC
Confidence            344455578999999999999999999865 7899999997442 23344566888899998  9999999999987554


Q ss_pred             ----cccchhhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhc
Q 039630          107 ----RILAPLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEE  169 (174)
Q Consensus       107 ----~~lv~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~  169 (174)
                          .++++  ++.+++.|...+.                 ...+++..+..++.|++.||.|||+.
T Consensus        93 ~~~~~~lv~--e~~~~g~L~~~l~-----------------~~~~~~~~~~~i~~qi~~al~~LH~~  140 (322)
T 3soc_A           93 VDVDLWLIT--AFHEKGSLSDFLK-----------------ANVVSWNELCHIAETMARGLAYLHED  140 (322)
T ss_dssp             SSEEEEEEE--ECCTTCBHHHHHH-----------------HCCBCHHHHHHHHHHHHHHHHHHTCC
T ss_pred             CCceEEEEE--ecCCCCCHHHHHH-----------------hcCCCHHHHHHHHHHHHHHHHHHHhh
Confidence                36666  6666666655331                 12378999999999999999999987

>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A

Probab=99.65  E-value=6.5e-16  Score=116.32  Aligned_cols=118  Identities=16%  Similarity=0.215  Sum_probs=91.6

Q ss_pred             hcCCeeecceecccCCeeEEEEE-EcCCCEEEEEEeeccC--------ccchhHHHHHHHHHhcccccCCCeeeeeccee
Q 039630           32 ATNGFRTSNKIGEGGFGSVYKGR-LEDGTVVAVNVLSVES--------KQGETEFMSEVASMANINICHENLVKLHGGCI  102 (174)
Q Consensus        32 ~~~~~~~~~~lg~G~~g~V~~~~-~~~~~~~avK~~~~~~--------~~~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~  102 (174)
                      ..++|.+.+.||+|+||.||+|. ..++..||+|++....        ......+.+|+.++++++  ||||+++++++.
T Consensus       133 ~~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~--hpniv~l~~~~~  210 (419)
T 3i6u_A          133 LRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLN--HPCIIKIKNFFD  210 (419)
T ss_dssp             HHTTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGGTTC--------CCHHHHHHHHHHCC--CTTBCCCCEEEE
T ss_pred             hhccEEEEeEEeeCCCeEEEEEEECCCCcEEEEEEEEechhcccccccchhHHHHHHHHHHHHhCC--CCCEeeEEEEEe
Confidence            34689999999999999999998 5678999999997541        112335889999999999  999999999875


Q ss_pred             cCCCcccchhhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhcc
Q 039630          103 DGPSRILAPLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEI  170 (174)
Q Consensus       103 ~~~~~~lv~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  170 (174)
                      . +..++++  ++.+++.+...+                .....+++..+..++.|++.||+|||++.
T Consensus       211 ~-~~~~lv~--e~~~~g~L~~~l----------------~~~~~~~~~~~~~i~~qi~~~l~~LH~~~  259 (419)
T 3i6u_A          211 A-EDYYIVL--ELMEGGELFDKV----------------VGNKRLKEATCKLYFYQMLLAVQYLHENG  259 (419)
T ss_dssp             S-SEEEEEE--ECCTTCBGGGGT----------------SSSCCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             c-CceEEEE--EcCCCCcHHHHH----------------hccCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            4 4456666  666666654422                22345889999999999999999999864

>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ...

Probab=99.65  E-value=5e-16  Score=110.80  Aligned_cols=116  Identities=21%  Similarity=0.286  Sum_probs=95.1

Q ss_pred             CCeeecceecccCCeeEEEEEE-cCCCEEEEEEeeccCc------cchhHHHHHHHHHhcccccCCCeeeeecceecCCC
Q 039630           34 NGFRTSNKIGEGGFGSVYKGRL-EDGTVVAVNVLSVESK------QGETEFMSEVASMANINICHENLVKLHGGCIDGPS  106 (174)
Q Consensus        34 ~~~~~~~~lg~G~~g~V~~~~~-~~~~~~avK~~~~~~~------~~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~~~~~  106 (174)
                      ++|++.+.||+|+||.||++.. .++..+|+|+++....      ...+.+.+|+.+++.++  |+||+++++.+...+.
T Consensus         5 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~--h~~i~~~~~~~~~~~~   82 (283)
T 3bhy_A            5 DHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIR--HPNIITLHDIFENKTD   82 (283)
T ss_dssp             HHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHCC--CTTBCCEEEEEECSSE
T ss_pred             hhhhhHHhhcccCceEEEEEEEcCCCCeeehHHhhhccccccccchHHHHHHHHHHHHHhCC--CCCeeehhheecCCCe
Confidence            4589999999999999999994 4689999999975521      13567899999999999  9999999999998888


Q ss_pred             cccchhhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhc
Q 039630          107 RILAPLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEE  169 (174)
Q Consensus       107 ~~lv~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~  169 (174)
                      .++++  ++.+++.+...+.                ....+++..+..++.|++.||.|||++
T Consensus        83 ~~lv~--e~~~~~~L~~~l~----------------~~~~~~~~~~~~~~~~i~~~l~~lH~~  127 (283)
T 3bhy_A           83 VVLIL--ELVSGGELFDFLA----------------EKESLTEDEATQFLKQILDGVHYLHSK  127 (283)
T ss_dssp             EEEEE--ECCCSCBHHHHHH----------------HHSSCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             EEEEE--eecCCCcHHHHHH----------------hcCCCCHHHHHHHHHHHHHHHHHHHhC
Confidence            88888  6666666655331                123478899999999999999999975

>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7

Probab=99.65  E-value=7.1e-16  Score=110.36  Aligned_cols=120  Identities=23%  Similarity=0.350  Sum_probs=93.2

Q ss_pred             hhcCCeeecc-eecccCCeeEEEEEE---cCCCEEEEEEeeccC-ccchhHHHHHHHHHhcccccCCCeeeeecceecCC
Q 039630           31 IATNGFRTSN-KIGEGGFGSVYKGRL---EDGTVVAVNVLSVES-KQGETEFMSEVASMANINICHENLVKLHGGCIDGP  105 (174)
Q Consensus        31 ~~~~~~~~~~-~lg~G~~g~V~~~~~---~~~~~~avK~~~~~~-~~~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~~~~  105 (174)
                      ...++|.+.+ .||+|+||.||+|..   .++..||+|+++... ......+.+|+.++..++  ||||+++++.+ ..+
T Consensus         6 ~~~~~~~i~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~--h~~i~~~~~~~-~~~   82 (287)
T 1u59_A            6 LKRDNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLD--NPYIVRLIGVC-QAE   82 (287)
T ss_dssp             CCGGGEEEEEEEEECCTTEEEEEEEEC---CCEEEEEEEECSSCCHHHHHHHHHHHHHHHHCC--CTTBCCEEEEE-ESS
T ss_pred             ccHHHhhhhhccccccCceeEEEeEeccCCCcceEEEEecCCccchhHHHHHHHHHHHHHhCC--CCCEeEEEEEe-cCC
Confidence            3445677766 999999999999984   357789999997653 334667899999999999  99999999998 455


Q ss_pred             CcccchhhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhcc
Q 039630          106 SRILAPLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEI  170 (174)
Q Consensus       106 ~~~lv~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  170 (174)
                      ..++++  ++.+++.+...+.               .....+++..+..++.|++.||.|||++.
T Consensus        83 ~~~lv~--e~~~~~~L~~~l~---------------~~~~~~~~~~~~~~~~qi~~~l~~lH~~~  130 (287)
T 1u59_A           83 ALMLVM--EMAGGGPLHKFLV---------------GKREEIPVSNVAELLHQVSMGMKYLEEKN  130 (287)
T ss_dssp             SEEEEE--ECCTTEEHHHHHT---------------TCTTTSCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             CcEEEE--EeCCCCCHHHHHH---------------hCCccCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            677777  6666666655331               12335789999999999999999999863

>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B

Probab=99.64  E-value=5.3e-16  Score=120.04  Aligned_cols=120  Identities=18%  Similarity=0.257  Sum_probs=98.2

Q ss_pred             CCeeecceecccCCeeEEEEEE-cCCCEEEEEEeeccC---ccchhHHHHHHHHHhcccccCCCeeeeecceecCCCccc
Q 039630           34 NGFRTSNKIGEGGFGSVYKGRL-EDGTVVAVNVLSVES---KQGETEFMSEVASMANINICHENLVKLHGGCIDGPSRIL  109 (174)
Q Consensus        34 ~~~~~~~~lg~G~~g~V~~~~~-~~~~~~avK~~~~~~---~~~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~~~~~~~l  109 (174)
                      ++|...+.||+|+||.||++.. .+|+.+|+|++....   ......+..|+.++..++  ||||+++++.+...+..++
T Consensus       185 ~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~l~k~~~~~~~~~~~~~~E~~iL~~l~--hp~Iv~l~~~~~~~~~l~l  262 (543)
T 3c4z_A          185 DWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVH--SRFIVSLAYAFETKTDLCL  262 (543)
T ss_dssp             GGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCC--CTTBCCEEEEEECSSEEEE
T ss_pred             hheEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEEhHHhhhhHHHHHHHHHHHHHHhcC--CCCEeeEEEEEeeCCEEEE
Confidence            5799999999999999999994 579999999997542   234567889999999999  9999999999999988888


Q ss_pred             chhhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhc
Q 039630          110 APLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEE  169 (174)
Q Consensus       110 v~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~  169 (174)
                      ++  ++.+++.+...+...            ......+++..+..++.||+.||.|||++
T Consensus       263 Vm--E~~~gg~L~~~l~~~------------~~~~~~l~e~~~~~~~~qi~~aL~~LH~~  308 (543)
T 3c4z_A          263 VM--TIMNGGDIRYHIYNV------------DEDNPGFQEPRAIFYTAQIVSGLEHLHQR  308 (543)
T ss_dssp             EE--CCCTTCBHHHHHHTS------------STTSCSCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             EE--EeccCCCHHHHHHHh------------hcccccccHHHHHHHHHHHHHHHHHHHHc
Confidence            88  777777776543211            11233588999999999999999999985

>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A*

Probab=99.64  E-value=7.3e-16  Score=110.89  Aligned_cols=118  Identities=28%  Similarity=0.370  Sum_probs=91.4

Q ss_pred             CCeeecceecccCCeeEEEEEE-----cCCCEEEEEEeecc-CccchhHHHHHHHHHhcccccCCCeeeeecceecC--C
Q 039630           34 NGFRTSNKIGEGGFGSVYKGRL-----EDGTVVAVNVLSVE-SKQGETEFMSEVASMANINICHENLVKLHGGCIDG--P  105 (174)
Q Consensus        34 ~~~~~~~~lg~G~~g~V~~~~~-----~~~~~~avK~~~~~-~~~~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~~~--~  105 (174)
                      +.|+..+.||+|+||.||++.+     .++..||+|+++.. .......+.+|+.++..++  |+||+++++.+...  .
T Consensus        21 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~--h~~i~~~~~~~~~~~~~   98 (302)
T 4e5w_A           21 RFLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLY--HENIVKYKGICTEDGGN   98 (302)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEECTTSSSCSEEEEEEEEC-----CCHHHHHHHHHHHHTCC--CTTBCCEEEEEEC---C
T ss_pred             hhhhhhhccCCCCceEEEEEEEccccCccCeEEEEEEecccccchhHHHHHHHHHHHHhCC--CCCeeeeeeEEecCCCc
Confidence            4589999999999999999983     36789999999754 3345577899999999999  99999999999876  4


Q ss_pred             CcccchhhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhcc
Q 039630          106 SRILAPLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEI  170 (174)
Q Consensus       106 ~~~lv~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  170 (174)
                      ..++++  ++.+++.+...+.               .....+++..+..++.|++.||.|||++.
T Consensus        99 ~~~lv~--e~~~~~~L~~~l~---------------~~~~~~~~~~~~~~~~~i~~~l~~lH~~~  146 (302)
T 4e5w_A           99 GIKLIM--EFLPSGSLKEYLP---------------KNKNKINLKQQLKYAVQICKGMDYLGSRQ  146 (302)
T ss_dssp             CEEEEE--ECCTTCBHHHHHH---------------HHTTTCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             eEEEEE--EeCCCCcHHHHHH---------------hccccCCHHHHHHHHHHHHHHHHHhhcCC
Confidence            456666  6666666655331               11234788999999999999999999853

>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A*

Probab=99.64  E-value=1.1e-15  Score=110.21  Aligned_cols=116  Identities=22%  Similarity=0.339  Sum_probs=96.4

Q ss_pred             CCeeecceecccCCeeEEEEE-EcCCCEEEEEEeeccC-ccchhHHHHHHHHHhcccccCCCeeeeecceecCCCcccch
Q 039630           34 NGFRTSNKIGEGGFGSVYKGR-LEDGTVVAVNVLSVES-KQGETEFMSEVASMANINICHENLVKLHGGCIDGPSRILAP  111 (174)
Q Consensus        34 ~~~~~~~~lg~G~~g~V~~~~-~~~~~~~avK~~~~~~-~~~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~~~~~~~lv~  111 (174)
                      ..|...+.||+|+||.||+|. ..++..||+|++.... ......+.+|+.++..++  |+||+++++.+...+..++++
T Consensus        22 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~--h~~i~~~~~~~~~~~~~~lv~   99 (303)
T 3a7i_A           22 ELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCD--SPYVTKYYGSYLKDTKLWIIM   99 (303)
T ss_dssp             GTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEETTTCSTTHHHHHHHHHHHHHCC--CTTBCCEEEEEEETTEEEEEE
T ss_pred             HHHHHhhhhcccCCeEEEEEEECCCCcEEEEEEecccccHHHHHHHHHHHHHHHhCC--CCCEeEEEEEEecCCeEEEEE
Confidence            569999999999999999998 4578899999997653 345677899999999998  999999999999988888888


Q ss_pred             hhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhcc
Q 039630          112 LQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEI  170 (174)
Q Consensus       112 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  170 (174)
                        ++.+++.+...+                 ....+++..+..++.|++.||.|||++.
T Consensus       100 --e~~~~~~L~~~~-----------------~~~~~~~~~~~~~~~qi~~~l~~lH~~~  139 (303)
T 3a7i_A          100 --EYLGGGSALDLL-----------------EPGPLDETQIATILREILKGLDYLHSEK  139 (303)
T ss_dssp             --ECCTTEEHHHHH-----------------TTSCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             --EeCCCCcHHHHH-----------------hcCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence              766666655432                 1124788999999999999999999863

>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A*

Probab=99.64  E-value=1.8e-16  Score=114.80  Aligned_cols=118  Identities=19%  Similarity=0.215  Sum_probs=93.5

Q ss_pred             cCCeeecceecccCCeeEEEEE-EcCCCEEEEEEeeccCc---cchhHHHHHHHHHhcccccCCCeeeeecceecCCCc-
Q 039630           33 TNGFRTSNKIGEGGFGSVYKGR-LEDGTVVAVNVLSVESK---QGETEFMSEVASMANINICHENLVKLHGGCIDGPSR-  107 (174)
Q Consensus        33 ~~~~~~~~~lg~G~~g~V~~~~-~~~~~~~avK~~~~~~~---~~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~~~~~~-  107 (174)
                      .++|++.+.||+|+||.||++. ..+++.||+|+++....   .....+.+|+.++..++  ||||+++++.+...... 
T Consensus        11 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~--hp~iv~~~~~~~~~~~~~   88 (311)
T 3ork_A           11 SDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALN--HPAIVAVYDTGEAETPAG   88 (311)
T ss_dssp             TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECTTTTTSHHHHHHHHHHHTTCCCCC--CTTBCCEEEEEEEEETTE
T ss_pred             cCcEEEEEEEccCCCEEEEEEEECCCCceEEEEEeCccccCCHHHHHHHHHHHHHHHcCC--CCCcceEEEeeeccCCCC
Confidence            3579999999999999999999 56789999999976532   22456889999999998  99999999998776544 


Q ss_pred             ---ccchhhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhcc
Q 039630          108 ---ILAPLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEI  170 (174)
Q Consensus       108 ---~lv~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  170 (174)
                         ++++  ++.+++.+...+.                ....+++..+..++.|++.||.|||++.
T Consensus        89 ~~~~lv~--e~~~g~~L~~~l~----------------~~~~~~~~~~~~~~~qi~~~l~~lH~~~  136 (311)
T 3ork_A           89 PLPYIVM--EYVDGVTLRDIVH----------------TEGPMTPKRAIEVIADACQALNFSHQNG  136 (311)
T ss_dssp             EEEEEEE--ECCCEEEHHHHHH----------------HHCSCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             cccEEEE--ecCCCCCHHHHHH----------------hcCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence               6676  6666666554331                1234788999999999999999999864

>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii}

Probab=99.64  E-value=5.3e-16  Score=117.95  Aligned_cols=116  Identities=16%  Similarity=0.241  Sum_probs=81.3

Q ss_pred             CCeeecceecccCCeeEEEEE-EcCCCEEEEEEeeccC--ccchhHHHHHHHHHhcccccCCCeeeeecceecC-----C
Q 039630           34 NGFRTSNKIGEGGFGSVYKGR-LEDGTVVAVNVLSVES--KQGETEFMSEVASMANINICHENLVKLHGGCIDG-----P  105 (174)
Q Consensus        34 ~~~~~~~~lg~G~~g~V~~~~-~~~~~~~avK~~~~~~--~~~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~~~-----~  105 (174)
                      ++|++.+.||+|+||.||+|. ..++..||+|++....  ......+.+|+.+++.++  |+||+++++++...     .
T Consensus        53 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~--h~niv~l~~~~~~~~~~~~~  130 (458)
T 3rp9_A           53 DRYEIRHLIGTGSYGHVCEAYDKLEKRVVAIKKILRVFEDLIDCKRILREIAILNRLN--HDHVVKVLDIVIPKDVEKFD  130 (458)
T ss_dssp             TTEEECCC-------CEEEEEECC--CEEEEEEECSTTSSHHHHHHHHHHHHHHHHCC--CTTBCCEEEECCCSCTTTCC
T ss_pred             CCeEEeeEeeecCCeEEEEEEECCCCcEEEEEEechhhcCHHHHHHHHHHHHHHHhCC--CCCCCceEEEEecCCcccCc
Confidence            579999999999999999998 5578999999996542  234567889999999999  99999999998544     3


Q ss_pred             CcccchhhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhcc
Q 039630          106 SRILAPLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEI  170 (174)
Q Consensus       106 ~~~lv~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  170 (174)
                      ..++++  ++.+ +.+...+                .....+++..+..++.||+.||.|||++.
T Consensus       131 ~~~lv~--e~~~-~~L~~~~----------------~~~~~l~~~~~~~~~~qi~~aL~~LH~~~  176 (458)
T 3rp9_A          131 ELYVVL--EIAD-SDFKKLF----------------RTPVYLTELHIKTLLYNLLVGVKYVHSAG  176 (458)
T ss_dssp             CEEEEE--CCCS-EEHHHHH----------------HSSCCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             eEEEEE--eccc-cchhhhc----------------ccCCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            466666  4332 2332221                12235889999999999999999999864

>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A*

Probab=99.64  E-value=2.5e-16  Score=113.23  Aligned_cols=130  Identities=16%  Similarity=0.230  Sum_probs=83.5

Q ss_pred             HHhhcCCeeecceecccCCeeEEEEE-EcCCCEEEEEEeeccC-ccchhHHHHHHHHHhcccccCCCeeeeecceecCCC
Q 039630           29 LKIATNGFRTSNKIGEGGFGSVYKGR-LEDGTVVAVNVLSVES-KQGETEFMSEVASMANINICHENLVKLHGGCIDGPS  106 (174)
Q Consensus        29 ~~~~~~~~~~~~~lg~G~~g~V~~~~-~~~~~~~avK~~~~~~-~~~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~~~~~  106 (174)
                      +....++|.+.+.||+|+||.||++. ..++..||+|++.... ......+.+|+.++..++  ||||+++++.+...+.
T Consensus        10 ~~i~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~--h~~i~~~~~~~~~~~~   87 (303)
T 2vwi_A           10 WSINRDDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCH--HPNIVSYYTSFVVKDE   87 (303)
T ss_dssp             ---CCCCCEEEEECC---CCCEEEEEC----CEEEEECCC----------------CCCCCC--CTTBCCEEEEEESSSC
T ss_pred             cccchhhhhhhheeccccceEEEEEEECCCCcEEEEEEEEhhhcchhHHHHHHHHHHHhhcC--CCCEeeEEEEEeecCC
Confidence            45566789999999999999999998 5578899999987542 334567889999999998  9999999999999988


Q ss_pred             cccchhhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhcc
Q 039630          107 RILAPLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEI  170 (174)
Q Consensus       107 ~~lv~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  170 (174)
                      .++++  ++.+++.+...+...        ..........+++..+..++.|++.||.|||++.
T Consensus        88 ~~lv~--e~~~~~~L~~~l~~~--------~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~  141 (303)
T 2vwi_A           88 LWLVM--KLLSGGSVLDIIKHI--------VAKGEHKSGVLDESTIATILREVLEGLEYLHKNG  141 (303)
T ss_dssp             EEEEE--ECCTTCBHHHHHHHH--------HHTTTTTTCSSCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             cEEEe--hhccCCchHHHHHHH--------hhccccccCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            88888  666666554432110        0000112345889999999999999999999864

>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A*

Probab=99.64  E-value=1.1e-15  Score=112.74  Aligned_cols=126  Identities=17%  Similarity=0.198  Sum_probs=96.0

Q ss_pred             chhhHHhhcCCeeecceecccCCeeEEEEEEcCCCEEEEEEeeccCcc-----------chhHHHHHHHHHhcccccCCC
Q 039630           25 SYNELKIATNGFRTSNKIGEGGFGSVYKGRLEDGTVVAVNVLSVESKQ-----------GETEFMSEVASMANINICHEN   93 (174)
Q Consensus        25 ~~~~~~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~avK~~~~~~~~-----------~~~~~~~e~~~l~~l~~~h~~   93 (174)
                      ...++....++|.+.+.||+|+||.||++...++..||+|.+......           ....+.+|+.++..++  |||
T Consensus        13 ~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~--h~~   90 (362)
T 3pg1_A           13 LIAELHAMQSPYTVQRFISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFH--HPN   90 (362)
T ss_dssp             HHHHHHHTTCSCEEEEEEEEETTEEEEEEECTTSCEEEEEEECEECCTTSCEEGGGSHHHHHHHHHHHHHHHHCC--CTT
T ss_pred             HHHHHHHhccceEEeEEeccCCCEEEEEEECCCCCeEEEEeccccCCccchhhhhhhhhHHHHHHHHHHHHHhCC--CcC
Confidence            345667777899999999999999999999767999999999644211           1267899999999999  999


Q ss_pred             eeeeecceecCC-----CcccchhhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhh
Q 039630           94 LVKLHGGCIDGP-----SRILAPLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHE  168 (174)
Q Consensus        94 i~~~~~~~~~~~-----~~~lv~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~  168 (174)
                      |+++++++...+     ..++++  ++.++ .+...+.               .....+++..+..++.|++.||.|||+
T Consensus        91 iv~~~~~~~~~~~~~~~~~~lv~--e~~~~-~l~~~~~---------------~~~~~~~~~~~~~~~~qi~~~l~~lH~  152 (362)
T 3pg1_A           91 ILGLRDIFVHFEEPAMHKLYLVT--ELMRT-DLAQVIH---------------DQRIVISPQHIQYFMYHILLGLHVLHE  152 (362)
T ss_dssp             BCCCSEEEEECCTTTCCEEEEEE--ECCSE-EHHHHHH---------------CTTSCCCHHHHHHHHHHHHHHHHHHHH
T ss_pred             ccceeeeEEeccCCCcceEEEEE--ccCCC-CHHHHHH---------------hcccCCCHHHHHHHHHHHHHHHHHHHH
Confidence            999999985533     345666  55442 3333221               122357899999999999999999998


Q ss_pred             cc
Q 039630          169 EI  170 (174)
Q Consensus       169 ~~  170 (174)
                      +.
T Consensus       153 ~~  154 (362)
T 3pg1_A          153 AG  154 (362)
T ss_dssp             TT
T ss_pred             Cc
Confidence            64

>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A*

Probab=99.64  E-value=2.2e-16  Score=112.63  Aligned_cols=121  Identities=23%  Similarity=0.313  Sum_probs=96.3

Q ss_pred             CCeeecceecccCCeeEEEEEE-cCCCEEEEEEeeccC--ccchhHHHHHHHHHhcc-cccCCCeeeeecceecCCCccc
Q 039630           34 NGFRTSNKIGEGGFGSVYKGRL-EDGTVVAVNVLSVES--KQGETEFMSEVASMANI-NICHENLVKLHGGCIDGPSRIL  109 (174)
Q Consensus        34 ~~~~~~~~lg~G~~g~V~~~~~-~~~~~~avK~~~~~~--~~~~~~~~~e~~~l~~l-~~~h~~i~~~~~~~~~~~~~~l  109 (174)
                      ++|++.+.||+|+||.||++.. .++..||+|+++...  ......+.+|+..+..+ +  ||||+++++.+...+..++
T Consensus        11 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~~--h~~iv~~~~~~~~~~~~~l   88 (289)
T 1x8b_A           11 TEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQ--HSHVVRYFSAWAEDDHMLI   88 (289)
T ss_dssp             HHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCCTTSHHHHHHHHHHHHHHHSCS--CTTBCCEEEEEEETTEEEE
T ss_pred             chhhhhhhhcCCCceEEEEEEEcCCCceEEEEEecccccccHHHHHHHHHHHHHHHhCC--CCCeeeeeeeeecCCeEEE
Confidence            4699999999999999999994 478999999998552  33456688899989888 6  9999999999999988888


Q ss_pred             chhhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhcc
Q 039630          110 APLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEI  170 (174)
Q Consensus       110 v~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  170 (174)
                      ++  ++.+++.|...+...            ......+++..+..++.|++.||.|||++.
T Consensus        89 v~--e~~~~~~L~~~l~~~------------~~~~~~~~~~~~~~i~~qi~~al~~lH~~~  135 (289)
T 1x8b_A           89 QN--EYCNGGSLADAISEN------------YRIMSYFKEAELKDLLLQVGRGLRYIHSMS  135 (289)
T ss_dssp             EE--ECCTTCBHHHHHHHH------------HHHTCCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             EE--EecCCCcHHHHHHhh------------cccccCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            88  777666666543211            001134789999999999999999999863

>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A*

Probab=99.64  E-value=5.1e-16  Score=120.66  Aligned_cols=121  Identities=22%  Similarity=0.269  Sum_probs=98.5

Q ss_pred             hcCCeeecceecccCCeeEEEEE-EcCCCEEEEEEeecc---CccchhHHHHHHHHHhcccccCCCeeeeecceecCCCc
Q 039630           32 ATNGFRTSNKIGEGGFGSVYKGR-LEDGTVVAVNVLSVE---SKQGETEFMSEVASMANINICHENLVKLHGGCIDGPSR  107 (174)
Q Consensus        32 ~~~~~~~~~~lg~G~~g~V~~~~-~~~~~~~avK~~~~~---~~~~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~~~~~~  107 (174)
                      ..++|...+.||+|+||.||++. ..+|+.||+|++...   .......+.+|+.++..++  |+||+++++.+.+.+..
T Consensus       182 ~~~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAvK~l~k~~~~~~~~~~~~~~E~~iL~~l~--hp~Iv~l~~~~~~~~~l  259 (576)
T 2acx_A          182 TKNTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVN--SRFVVSLAYAYETKDAL  259 (576)
T ss_dssp             CGGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCC--CTTBCCEEEEEECSSEE
T ss_pred             cccceEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhHhhhhhHHHHHHHHHHHHHHHcC--CCCEeeEEEEEeeCCEE
Confidence            34579999999999999999999 457999999999754   2334566889999999999  99999999999999888


Q ss_pred             ccchhhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhcc
Q 039630          108 ILAPLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEI  170 (174)
Q Consensus       108 ~lv~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  170 (174)
                      ++|+  ++.+++.+...+..              .....+++..+..++.||+.||.|||++.
T Consensus       260 ~lVm--Ey~~gg~L~~~l~~--------------~~~~~l~e~~~~~i~~qIl~aL~yLH~~g  306 (576)
T 2acx_A          260 CLVL--TLMNGGDLKFHIYH--------------MGQAGFPEARAVFYAAEICCGLEDLHRER  306 (576)
T ss_dssp             EEEE--CCCCSCBHHHHHHS--------------SSSCCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             EEEE--EcCCCCcHHHHHHh--------------cCCCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            8888  77777777654321              11224789999999999999999999863

>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A*

Probab=99.64  E-value=6.1e-16  Score=111.03  Aligned_cols=117  Identities=16%  Similarity=0.198  Sum_probs=94.9

Q ss_pred             CCeeecceecccCCeeEEEEEE-cCCCEEEEEEeeccC---ccchhHHHHHHHHHhcccccCCCeeeeecceecCCCccc
Q 039630           34 NGFRTSNKIGEGGFGSVYKGRL-EDGTVVAVNVLSVES---KQGETEFMSEVASMANINICHENLVKLHGGCIDGPSRIL  109 (174)
Q Consensus        34 ~~~~~~~~lg~G~~g~V~~~~~-~~~~~~avK~~~~~~---~~~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~~~~~~~l  109 (174)
                      ++|.+.+.||+|+||.||++.. .++..+|+|++....   ....+.+.+|+.+++.+.  |+||+++++.+...+..++
T Consensus        15 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~l~--h~~iv~~~~~~~~~~~~~l   92 (294)
T 2rku_A           15 RRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLA--HQHVVGFHGFFEDNDFVFV   92 (294)
T ss_dssp             EEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCC--CTTBCCEEEEEECSSEEEE
T ss_pred             cceEEEEEEeecCCEEEEEEEECCCCceEEEEEechhhccCHHHHHHHHHHHHHHHhCC--CCCEeeeeeeeccCCEEEE
Confidence            5699999999999999999994 468899999997552   234567889999999998  9999999999998888888


Q ss_pred             chhhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhcc
Q 039630          110 APLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEI  170 (174)
Q Consensus       110 v~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  170 (174)
                      ++  ++.+++.+...+.                ....+++..+..++.|++.||.|||++.
T Consensus        93 v~--e~~~~~~L~~~~~----------------~~~~~~~~~~~~i~~qi~~~l~~lH~~~  135 (294)
T 2rku_A           93 VL--ELCRRRSLLELHK----------------RRKALTEPEARYYLRQIVLGCQYLHRNR  135 (294)
T ss_dssp             EE--ECCTTCBHHHHHH----------------HHCSCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             EE--ecCCCCCHHHHHH----------------hcCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            88  6666655544221                1234788999999999999999999863

>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ...

Probab=99.64  E-value=5.6e-16  Score=110.44  Aligned_cols=117  Identities=23%  Similarity=0.325  Sum_probs=95.2

Q ss_pred             CCeeecceecccCCeeEEEEE-EcCCCEEEEEEeeccC---ccchhHHHHHHHHHhcccccCCCeeeeecceecCCCccc
Q 039630           34 NGFRTSNKIGEGGFGSVYKGR-LEDGTVVAVNVLSVES---KQGETEFMSEVASMANINICHENLVKLHGGCIDGPSRIL  109 (174)
Q Consensus        34 ~~~~~~~~lg~G~~g~V~~~~-~~~~~~~avK~~~~~~---~~~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~~~~~~~l  109 (174)
                      ++|++.+.||+|+||.||++. ..++..+|+|++....   ......+.+|+.+++.++  ||||+++++.+...+..++
T Consensus         9 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~--h~~i~~~~~~~~~~~~~~l   86 (279)
T 3fdn_A            9 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR--HPNILRLYGYFHDATRVYL   86 (279)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHHTCHHHHHHHHHHHTTCC--CTTBCCEEEEEECSSEEEE
T ss_pred             ccEEEeeEEecCCCeEEEEEEEccCCcEEEEEEEeccccchhhHHHHHHHHHHHHHcCC--CCCCcchhheEecCCEEEE
Confidence            579999999999999999998 4567899999996442   233556889999999999  9999999999999888888


Q ss_pred             chhhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhcc
Q 039630          110 APLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEI  170 (174)
Q Consensus       110 v~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  170 (174)
                      ++  ++.+++.+...+.                ....+++..+..++.|++.||.|||++.
T Consensus        87 v~--e~~~~~~l~~~l~----------------~~~~~~~~~~~~~~~qi~~~l~~LH~~~  129 (279)
T 3fdn_A           87 IL--EYAPLGTVYRELQ----------------KLSKFDEQRTATYITELANALSYCHSKR  129 (279)
T ss_dssp             EE--CCCTTEEHHHHHH----------------HHSSCCHHHHHHHHHHHHHHHHHHHTTT
T ss_pred             EE--ecCCCCcHHHHHH----------------hcCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            88  6666666655331                1124788899999999999999999853

>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens}

Probab=99.64  E-value=1.1e-15  Score=111.42  Aligned_cols=119  Identities=24%  Similarity=0.378  Sum_probs=93.7

Q ss_pred             cCCeeecceecccCCeeEEEEEE-----cCCCEEEEEEeeccCccchhHHHHHHHHHhcccccCCCeeeeecceecCC--
Q 039630           33 TNGFRTSNKIGEGGFGSVYKGRL-----EDGTVVAVNVLSVESKQGETEFMSEVASMANINICHENLVKLHGGCIDGP--  105 (174)
Q Consensus        33 ~~~~~~~~~lg~G~~g~V~~~~~-----~~~~~~avK~~~~~~~~~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~~~~--  105 (174)
                      .++|++.+.||+|+||.||++..     .++..||+|++..........+.+|+.+++.++  |+||+++++.+...+  
T Consensus        40 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~--h~~iv~~~~~~~~~~~~  117 (326)
T 2w1i_A           40 ERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQ--HDNIVKYKGVCYSAGRR  117 (326)
T ss_dssp             GGGEEEEEEEECCSSEEEEEEEECTTSSSCCEEEEEEEESSCCSHHHHHHHHHHHHHHTCC--CTTBCCEEEEECC----
T ss_pred             HHHceeeeeeccCCCeEEEEEEeccccCCCceEEEEEEeccCCHHHHHHHHHHHHHHHhCC--CCCeeeEEEEEEecCCC
Confidence            35699999999999999999983     368899999998665556678999999999999  999999999887654  


Q ss_pred             CcccchhhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhcc
Q 039630          106 SRILAPLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEI  170 (174)
Q Consensus       106 ~~~lv~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  170 (174)
                      ..++++  ++.+++.+...+..               ....+++..++.++.|++.||.|||++.
T Consensus       118 ~~~lv~--e~~~~~~L~~~l~~---------------~~~~~~~~~~~~i~~qi~~aL~~LH~~~  165 (326)
T 2w1i_A          118 NLKLIM--EYLPYGSLRDYLQK---------------HKERIDHIKLLQYTSQICKGMEYLGTKR  165 (326)
T ss_dssp             CCEEEE--CCCTTCBHHHHHHH---------------STTSSCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             ceEEEE--ECCCCCCHHHHHHh---------------cccCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            456666  66666666553311               1234788999999999999999999753

>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A*

Probab=99.64  E-value=6.2e-16  Score=113.11  Aligned_cols=118  Identities=16%  Similarity=0.196  Sum_probs=95.6

Q ss_pred             cCCeeecceecccCCeeEEEEEE-cCCCEEEEEEeeccC---ccchhHHHHHHHHHhcccccCCCeeeeecceecCCCcc
Q 039630           33 TNGFRTSNKIGEGGFGSVYKGRL-EDGTVVAVNVLSVES---KQGETEFMSEVASMANINICHENLVKLHGGCIDGPSRI  108 (174)
Q Consensus        33 ~~~~~~~~~lg~G~~g~V~~~~~-~~~~~~avK~~~~~~---~~~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~~~~~~~  108 (174)
                      .++|.+.+.||+|+||.||++.. .++..+|+|++....   ......+.+|+.+++.+.  |+||+++++.+...+..+
T Consensus        40 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~~l~~l~--h~~iv~~~~~~~~~~~~~  117 (335)
T 2owb_A           40 RRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLA--HQHVVGFHGFFEDNDFVF  117 (335)
T ss_dssp             TEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCC--CTTBCCEEEEEECSSEEE
T ss_pred             CCceEEEEEEeeCCCeEEEEEEECCCCCEEEEEEechhhhcCHHHHHHHHHHHHHHHhCC--CCCCCeEEEEEecCCeEE
Confidence            35799999999999999999994 568899999997542   234567889999999999  999999999999988888


Q ss_pred             cchhhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhcc
Q 039630          109 LAPLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEI  170 (174)
Q Consensus       109 lv~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  170 (174)
                      +++  ++.+++.+...+.                ....+++..+..++.|++.||.|||++.
T Consensus       118 lv~--e~~~~~~L~~~~~----------------~~~~l~~~~~~~i~~qi~~aL~~LH~~~  161 (335)
T 2owb_A          118 VVL--ELCRRRSLLELHK----------------RRKALTEPEARYYLRQIVLGCQYLHRNR  161 (335)
T ss_dssp             EEE--CCCTTCBHHHHHH----------------HHCSCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             EEE--ecCCCCCHHHHHh----------------ccCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            888  6666655544221                1234788999999999999999999863

>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A*

Probab=99.64  E-value=6.3e-16  Score=111.88  Aligned_cols=131  Identities=26%  Similarity=0.390  Sum_probs=92.8

Q ss_pred             hhhHHhhcCCeeecceecccCCeeEEEEEEc----CCCEEEEEEeeccC--ccchhHHHHHHHHHhcccccCCCeeeeec
Q 039630           26 YNELKIATNGFRTSNKIGEGGFGSVYKGRLE----DGTVVAVNVLSVES--KQGETEFMSEVASMANINICHENLVKLHG   99 (174)
Q Consensus        26 ~~~~~~~~~~~~~~~~lg~G~~g~V~~~~~~----~~~~~avK~~~~~~--~~~~~~~~~e~~~l~~l~~~h~~i~~~~~   99 (174)
                      .+.+....++|.+.+.||+|+||.||+|...    ++..||+|.++...  ......+.+|+.+++.++  ||||+++++
T Consensus        26 ~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~--h~~iv~~~~  103 (313)
T 3brb_A           26 LEDVVIDRNLLILGKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFS--HPNVIRLLG  103 (313)
T ss_dssp             TTTTBCCGGGEEEEEEEEC-CCCCEEEEEEECTTSCEEEEEEEEC---CCCHHHHHHHHHHHHHHHTCC--CTTBCCCCE
T ss_pred             HHhcccCHHHeeeccceeecCCeEEEEEEEeccCCceeEEEEEEEeccccchhHHHHHHHHHHHHhcCC--CCCeeeeeE
Confidence            3455566678999999999999999999843    34589999997552  233567899999999999  999999999


Q ss_pred             ceecCCCc-----ccchhhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhcc
Q 039630          100 GCIDGPSR-----ILAPLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEI  170 (174)
Q Consensus       100 ~~~~~~~~-----~lv~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  170 (174)
                      ++...+..     ++++  ++.+++.+...+...          ........+++..++.++.|++.||.|||++.
T Consensus       104 ~~~~~~~~~~~~~~~v~--e~~~~~~L~~~l~~~----------~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~  167 (313)
T 3brb_A          104 VCIEMSSQGIPKPMVIL--PFMKYGDLHTYLLYS----------RLETGPKHIPLQTLLKFMVDIALGMEYLSNRN  167 (313)
T ss_dssp             EEEC-------CEEEEE--ECCTTCBHHHHHHHT----------TBTTSCCCCCHHHHHHHHHHHHHHHHHHHTTT
T ss_pred             EEeeccccCCcccEEEE--ecccCCCHHHHHHHh----------hhhcCCccCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            99876532     5666  666655555433111          00122345889999999999999999999864

>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A*

Probab=99.63  E-value=1.2e-16  Score=121.14  Aligned_cols=117  Identities=22%  Similarity=0.227  Sum_probs=88.2

Q ss_pred             hcCCeeecceecccCCeeEEEEE-EcCCCEEEEEEeecc---CccchhHHHHHHHHHhcccccCCCeeeeecceecCCCc
Q 039630           32 ATNGFRTSNKIGEGGFGSVYKGR-LEDGTVVAVNVLSVE---SKQGETEFMSEVASMANINICHENLVKLHGGCIDGPSR  107 (174)
Q Consensus        32 ~~~~~~~~~~lg~G~~g~V~~~~-~~~~~~~avK~~~~~---~~~~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~~~~~~  107 (174)
                      ..++|++.+.||+|+||.||++. ..++..||+|+++..   .......+.+|+.++..++  ||||+++++.+...+..
T Consensus       146 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~--h~~iv~l~~~~~~~~~~  223 (446)
T 4ejn_A          146 TMNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSR--HPFLTALKYSFQTHDRL  223 (446)
T ss_dssp             CGGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHC-------------CCCCCS--CTTSCCEEEEEEETTEE
T ss_pred             ChHHcEEeEEEeeCcCEEEEEEEEcCCCCEEEEEEEEhhhhhhhHHHHHHHHHHHHHHhCC--CCeEeeEEEEEeeCCEE
Confidence            34679999999999999999998 567899999999754   2334556788999999998  99999999999999888


Q ss_pred             ccchhhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhh
Q 039630          108 ILAPLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHE  168 (174)
Q Consensus       108 ~lv~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~  168 (174)
                      ++|+  ++.+++.+...+.                ....+++..+..++.|++.||+|||+
T Consensus       224 ~lv~--e~~~~~~L~~~l~----------------~~~~~~~~~~~~~~~qi~~aL~~LH~  266 (446)
T 4ejn_A          224 CFVM--EYANGGELFFHLS----------------RERVFSEDRARFYGAEIVSALDYLHS  266 (446)
T ss_dssp             EEEE--CCCSSCBHHHHHH----------------HHSCCCHHHHHHHHHHHHHHHHHHHH
T ss_pred             EEEE--eeCCCCcHHHHHH----------------hcCCCCHHHHHHHHHHHHHHHHHHhh
Confidence            8888  7777776655331                12347889999999999999999997

>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A*

Probab=99.63  E-value=4e-16  Score=115.03  Aligned_cols=120  Identities=18%  Similarity=0.129  Sum_probs=96.7

Q ss_pred             hcCCeeecceecccCCeeEEEEEE-cCCCEEEEEEeecc---CccchhHHHHHHHHHhcccccCCCeeeeecceecCCCc
Q 039630           32 ATNGFRTSNKIGEGGFGSVYKGRL-EDGTVVAVNVLSVE---SKQGETEFMSEVASMANINICHENLVKLHGGCIDGPSR  107 (174)
Q Consensus        32 ~~~~~~~~~~lg~G~~g~V~~~~~-~~~~~~avK~~~~~---~~~~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~~~~~~  107 (174)
                      ..++|.+.+.||+|+||.||++.. .+++.+|+|+++..   .......+..|..++..+. .|++|+++++++...+..
T Consensus        18 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~~l~~~~-~hp~iv~l~~~~~~~~~~   96 (353)
T 2i0e_A           18 KLTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPG-KPPFLTQLHSCFQTMDRL   96 (353)
T ss_dssp             -CTTEEEEEEEEEETTEEEEEEEETTEEEEEEEEEEEHHHHHHTTCHHHHHHHHHHHTCTT-CCTTBCCEEEEEECSSEE
T ss_pred             chHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhcchHHHHHHHHHHHHHhcC-CCCEEeeEEEEEEcCCEE
Confidence            346899999999999999999994 45889999999754   2334566888999998873 399999999999998888


Q ss_pred             ccchhhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhcc
Q 039630          108 ILAPLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEI  170 (174)
Q Consensus       108 ~lv~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  170 (174)
                      ++++  ++.+++.|...+.                ....+++..+..++.|++.||.|||++.
T Consensus        97 ~lv~--E~~~gg~L~~~l~----------------~~~~~~~~~~~~~~~qi~~aL~~LH~~g  141 (353)
T 2i0e_A           97 YFVM--EYVNGGDLMYHIQ----------------QVGRFKEPHAVFYAAEIAIGLFFLQSKG  141 (353)
T ss_dssp             EEEE--ECCCSCBHHHHHH----------------HHSSCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             EEEE--eCCCCCcHHHHHH----------------hcCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            8888  7777777665432                1224788999999999999999999863

>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A*

Probab=99.63  E-value=5.6e-16  Score=111.10  Aligned_cols=126  Identities=23%  Similarity=0.315  Sum_probs=93.4

Q ss_pred             echhhHHhhcCCeeecc-eecccCCeeEEEEEE---cCCCEEEEEEeeccC--ccchhHHHHHHHHHhcccccCCCeeee
Q 039630           24 ISYNELKIATNGFRTSN-KIGEGGFGSVYKGRL---EDGTVVAVNVLSVES--KQGETEFMSEVASMANINICHENLVKL   97 (174)
Q Consensus        24 ~~~~~~~~~~~~~~~~~-~lg~G~~g~V~~~~~---~~~~~~avK~~~~~~--~~~~~~~~~e~~~l~~l~~~h~~i~~~   97 (174)
                      +..+++....++|.+.+ .||+|+||.||++..   .++..+|+|+++...  ......+.+|+.+++.++  |+||+++
T Consensus         6 i~~~~~~~~~~~y~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~--h~~i~~~   83 (291)
T 1xbb_A            6 IRPKEVYLDRKLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLD--NPYIVRM   83 (291)
T ss_dssp             -----CBCCGGGEEEEEEEEEECSSEEEEEEEEECSSSEEEEEEEEEC-----CHHHHHHHHHHHHHHTCC--CTTBCCE
T ss_pred             cCcceeeecchhhhhccCccccccCeeeEeeeecCCCceeeEEEEeecccccCHHHHHHHHHHHHHHHhCC--CCCEEEE
Confidence            34445555667788888 999999999999963   346789999997553  223567899999999999  9999999


Q ss_pred             ecceecCCCcccchhhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhcc
Q 039630           98 HGGCIDGPSRILAPLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEI  170 (174)
Q Consensus        98 ~~~~~~~~~~~lv~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  170 (174)
                      ++.+ ..+..++++  ++.+++.+...+.                ....+++..+..++.|++.||.|||++.
T Consensus        84 ~~~~-~~~~~~lv~--e~~~~~~L~~~l~----------------~~~~~~~~~~~~i~~qi~~~l~~LH~~~  137 (291)
T 1xbb_A           84 IGIC-EAESWMLVM--EMAELGPLNKYLQ----------------QNRHVKDKNIIELVHQVSMGMKYLEESN  137 (291)
T ss_dssp             EEEE-ESSSEEEEE--ECCTTEEHHHHHH----------------HCTTCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             EEEE-CCCCcEEEE--EeCCCCCHHHHHH----------------hCcCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            9998 556667777  6666666655331                1224788899999999999999999863

>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A*

Probab=99.63  E-value=6.6e-16  Score=109.78  Aligned_cols=119  Identities=19%  Similarity=0.264  Sum_probs=96.6

Q ss_pred             hcCCeeecceecccCCeeEEEEEE-cCCCEEEEEEeecc---CccchhHHHHHHHHHhcccccCCCeeeeecceecCCCc
Q 039630           32 ATNGFRTSNKIGEGGFGSVYKGRL-EDGTVVAVNVLSVE---SKQGETEFMSEVASMANINICHENLVKLHGGCIDGPSR  107 (174)
Q Consensus        32 ~~~~~~~~~~lg~G~~g~V~~~~~-~~~~~~avK~~~~~---~~~~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~~~~~~  107 (174)
                      ..++|.+.+.||+|+||.||++.. .+++.+|+|++...   .......+.+|+.+++.++  |+||+++++.+...+..
T Consensus         9 ~~~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~--h~~i~~~~~~~~~~~~~   86 (276)
T 2h6d_A            9 KIGHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFR--HPHIIKLYQVISTPTDF   86 (276)
T ss_dssp             EETTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCC--CTTBCCEEEEEECSSEE
T ss_pred             eeccEEEEeeecCCCCeEEEEEEECCCCceEEEEEeccccccchhHHHHHHHHHHHHhcCC--CCCEeEEEEEEecCCeE
Confidence            346799999999999999999994 47899999999754   2234567889999999999  99999999999998888


Q ss_pred             ccchhhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhcc
Q 039630          108 ILAPLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEI  170 (174)
Q Consensus       108 ~lv~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  170 (174)
                      ++++  ++.+++.+...+..                ...+++..+..++.|++.||.|||++.
T Consensus        87 ~lv~--e~~~~~~L~~~l~~----------------~~~~~~~~~~~~~~qi~~~l~~lH~~~  131 (276)
T 2h6d_A           87 FMVM--EYVSGGELFDYICK----------------HGRVEEMEARRLFQQILSAVDYCHRHM  131 (276)
T ss_dssp             EEEE--ECCCSCBHHHHHHH----------------HCSCCHHHHHHHHHHHHHHHHHHHHHC
T ss_pred             EEEE--eccCCCcHHHHHhc----------------cCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            8888  66666665543311                124788899999999999999999864

>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A*

Probab=99.63  E-value=8e-16  Score=110.11  Aligned_cols=117  Identities=22%  Similarity=0.329  Sum_probs=96.1

Q ss_pred             CCeeecceecccCCeeEEEEEE-cCCCEEEEEEeecc--CccchhHHHHHHHHHhcccccCCCeeeeecceecCCCcccc
Q 039630           34 NGFRTSNKIGEGGFGSVYKGRL-EDGTVVAVNVLSVE--SKQGETEFMSEVASMANINICHENLVKLHGGCIDGPSRILA  110 (174)
Q Consensus        34 ~~~~~~~~lg~G~~g~V~~~~~-~~~~~~avK~~~~~--~~~~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~~~~~~~lv  110 (174)
                      ++|++.+.||+|+||.||++.. .+++.||+|++...  .......+.+|+.+++.++  |+||+++++.+...+..+++
T Consensus        22 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~--h~~i~~~~~~~~~~~~~~lv   99 (287)
T 2wei_A           22 ERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLD--HPNIMKLFEILEDSSSFYIV   99 (287)
T ss_dssp             HHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGBSSSCHHHHHHHHHHHHTCC--CTTBCCEEEEEECSSEEEEE
T ss_pred             hcceeeEEEcCCCCEEEEEEEEcCCCcEEEEEEecccccchHHHHHHHHHHHHHHhcc--CCCccEEEEEEeCCCeEEEE
Confidence            4699999999999999999994 47889999999754  2345677899999999999  99999999999988888888


Q ss_pred             hhhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhcc
Q 039630          111 PLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEI  170 (174)
Q Consensus       111 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  170 (174)
                      +  ++..++.+...+..                ...+++..+..++.|++.||.|||++.
T Consensus       100 ~--e~~~~~~L~~~l~~----------------~~~~~~~~~~~i~~qi~~~l~~LH~~~  141 (287)
T 2wei_A          100 G--ELYTGGELFDEIIK----------------RKRFSEHDAARIIKQVFSGITYMHKHN  141 (287)
T ss_dssp             E--CCCCSCBHHHHHHH----------------HSSCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             E--EccCCCCHHHHHHh----------------cCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            8  66666666543321                124788999999999999999999864

>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A*

Probab=99.63  E-value=3.9e-16  Score=112.81  Aligned_cols=122  Identities=21%  Similarity=0.305  Sum_probs=94.4

Q ss_pred             cCCeeecceecccCCeeEEEEE-EcCCCEEEEEEeeccC---ccchhHHHHHHHHHhcccccCCCeeeeecceecCCCcc
Q 039630           33 TNGFRTSNKIGEGGFGSVYKGR-LEDGTVVAVNVLSVES---KQGETEFMSEVASMANINICHENLVKLHGGCIDGPSRI  108 (174)
Q Consensus        33 ~~~~~~~~~lg~G~~g~V~~~~-~~~~~~~avK~~~~~~---~~~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~~~~~~~  108 (174)
                      .++|++.+.||+|+||.||++. ..++..+|+|+++...   ......+.+|+.+++.++  |+||+++++.+...+..+
T Consensus        31 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~--h~~i~~~~~~~~~~~~~~  108 (310)
T 2wqm_A           31 LANFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLN--HPNVIKYYASFIEDNELN  108 (310)
T ss_dssp             GGGEEEEEEEECC--CEEEEEEETTTCCEEEEEEECTTSSCCHHHHHHHHHHHHHHHTCC--CTTBCCEEEEEEETTEEE
T ss_pred             ccceEEEEeecCCCCceEEEEEEcCCCceEEEEeeehhhccCHHHHHHHHHHHHHHHhCC--CCCEeeEEEEEEcCCcEE
Confidence            3579999999999999999998 4678999999997542   234567889999999999  999999999999988888


Q ss_pred             cchhhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhcc
Q 039630          109 LAPLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEI  170 (174)
Q Consensus       109 lv~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  170 (174)
                      +++  ++.+++.+...+...            ......+++..+..++.|++.||.|||++.
T Consensus       109 lv~--e~~~~~~L~~~l~~~------------~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~  156 (310)
T 2wqm_A          109 IVL--ELADAGDLSRMIKHF------------KKQKRLIPERTVWKYFVQLCSALEHMHSRR  156 (310)
T ss_dssp             EEE--ECCCSCBHHHHHHHH------------HHTTCCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             EEE--ecCCCCCHHHHHHHh------------cccccCCCHHHHHHHHHHHHHHHHHHhhCC
Confidence            888  666655554422110            011234788899999999999999999864

>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A*

Probab=99.63  E-value=6.9e-16  Score=110.11  Aligned_cols=123  Identities=20%  Similarity=0.239  Sum_probs=94.1

Q ss_pred             hHHhhcCCeeecceecccCCeeEEEEEEc----CCCEEEEEEeeccC-ccchhHHHHHHHHHhcccccCCCeeeeeccee
Q 039630           28 ELKIATNGFRTSNKIGEGGFGSVYKGRLE----DGTVVAVNVLSVES-KQGETEFMSEVASMANINICHENLVKLHGGCI  102 (174)
Q Consensus        28 ~~~~~~~~~~~~~~lg~G~~g~V~~~~~~----~~~~~avK~~~~~~-~~~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~  102 (174)
                      ++....++|++.+.||+|+||.||+|...    .+..+|+|.++... ......+.+|+.+++.++  ||||+++++++.
T Consensus         9 ~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~--h~~iv~~~~~~~   86 (281)
T 1mp8_A            9 DYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFD--HPHIVKLIGVIT   86 (281)
T ss_dssp             CCBCCGGGEEEEEEEEECSSSEEEEEEECCC--CCEEEEEEECTTTTSHHHHHHHHHHHHHHHTCC--CTTBCCEEEEEC
T ss_pred             ceEEehHHeEEEeEeeecCCeeEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHHHHHHhCC--CCccceEEEEEc
Confidence            34445578999999999999999999843    24579999987542 334567889999999999  999999999874


Q ss_pred             cCCCcccchhhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhcc
Q 039630          103 DGPSRILAPLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEI  170 (174)
Q Consensus       103 ~~~~~~lv~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  170 (174)
                       .+..++++  ++.+++.+...+.               .....+++..+..++.|++.||.|||++.
T Consensus        87 -~~~~~lv~--e~~~~~~L~~~l~---------------~~~~~~~~~~~~~~~~qi~~~l~~lH~~~  136 (281)
T 1mp8_A           87 -ENPVWIIM--ELCTLGELRSFLQ---------------VRKYSLDLASLILYAYQLSTALAYLESKR  136 (281)
T ss_dssp             -SSSCEEEE--ECCTTEEHHHHHH---------------HTTTTSCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             -cCccEEEE--ecCCCCCHHHHHH---------------hcCCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence             45667777  6666666655331               11234788999999999999999999863

>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A*

Probab=99.63  E-value=5.9e-16  Score=113.91  Aligned_cols=117  Identities=23%  Similarity=0.351  Sum_probs=92.8

Q ss_pred             CCeeecceecccCCeeEEEEE-EcCCCEEEEEEeeccCc---cchhHHHHHHHHHhcccccCCCeeeeecceecCCCccc
Q 039630           34 NGFRTSNKIGEGGFGSVYKGR-LEDGTVVAVNVLSVESK---QGETEFMSEVASMANINICHENLVKLHGGCIDGPSRIL  109 (174)
Q Consensus        34 ~~~~~~~~lg~G~~g~V~~~~-~~~~~~~avK~~~~~~~---~~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~~~~~~~l  109 (174)
                      +.|...+.||+|+||.||+|. ..++..||+|++.....   .....+.+|+.+++.++  ||||+++++++...+..++
T Consensus        54 ~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~--hpniv~~~~~~~~~~~~~l  131 (348)
T 1u5q_A           54 KLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLR--HPNTIQYRGCYLREHTAWL  131 (348)
T ss_dssp             HHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEESCSSCHHHHHHHHHHHHHHHHHCC--CTTBCCEEEEEEETTEEEE
T ss_pred             hheeeeeEEccCCCEEEEEEEEccCCeEEEEEEEccccccchHHHHHHHHHHHHHHhCC--CCCEeeEEEEEEECCeEEE
Confidence            458999999999999999998 46789999999975532   22456889999999999  9999999999999988888


Q ss_pred             chhhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhcc
Q 039630          110 APLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEI  170 (174)
Q Consensus       110 v~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  170 (174)
                      ++  ++..+ .+...+.               .....+++..+..++.|++.||.|||++.
T Consensus       132 v~--e~~~g-~l~~~l~---------------~~~~~l~~~~~~~i~~qi~~aL~~LH~~~  174 (348)
T 1u5q_A          132 VM--EYCLG-SASDLLE---------------VHKKPLQEVEIAAVTHGALQGLAYLHSHN  174 (348)
T ss_dssp             EE--ECCSE-EHHHHHH---------------HHTSCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             EE--ecCCC-CHHHHHH---------------HhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            88  55542 2322221               11235788999999999999999999864

>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A*

Probab=99.63  E-value=7.5e-16  Score=112.22  Aligned_cols=118  Identities=21%  Similarity=0.303  Sum_probs=94.0

Q ss_pred             CCeeecceecccCCeeEEEEEE-----cCCCEEEEEEeeccCccchhHHHHHHHHHhcccccCCCeeeeecceecC--CC
Q 039630           34 NGFRTSNKIGEGGFGSVYKGRL-----EDGTVVAVNVLSVESKQGETEFMSEVASMANINICHENLVKLHGGCIDG--PS  106 (174)
Q Consensus        34 ~~~~~~~~lg~G~~g~V~~~~~-----~~~~~~avK~~~~~~~~~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~~~--~~  106 (174)
                      ++|++.+.||+|+||.||++..     .++..||+|++..........+.+|+.+++.++  |+||+++++.+...  ..
T Consensus        23 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~--h~~i~~~~~~~~~~~~~~  100 (327)
T 3lxl_A           23 RHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALH--SDFIVKYRGVSYGPGRQS  100 (327)
T ss_dssp             GGEEEEEEEEEETTEEEEEEEECTTSSSCSEEEEEEEESSCCHHHHHHHHHHHHHHHTCC--CTTBCCEEEEEECSSSCE
T ss_pred             hhhhhhhhccCCCCeEEEEEEeccCCCCcceEEEEEEeccCCHHHHHHHHHHHHHHHhcC--CCceeEEEEEEecCCCce
Confidence            5689999999999999999983     457899999998665556677999999999999  99999999988754  34


Q ss_pred             cccchhhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhcc
Q 039630          107 RILAPLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEI  170 (174)
Q Consensus       107 ~~lv~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  170 (174)
                      .++++  ++.+++.+...+..               ....+++..++.++.|++.||.|||++.
T Consensus       101 ~~lv~--e~~~~~~L~~~l~~---------------~~~~~~~~~~~~i~~qi~~al~~lH~~~  147 (327)
T 3lxl_A          101 LRLVM--EYLPSGCLRDFLQR---------------HRARLDASRLLLYSSQICKGMEYLGSRR  147 (327)
T ss_dssp             EEEEE--ECCTTCBHHHHHHH---------------HGGGCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             EEEEE--eecCCCCHHHHHHh---------------cccCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            55666  66666666553311               1224789999999999999999999853

>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7

Probab=99.63  E-value=8.7e-16  Score=112.81  Aligned_cols=119  Identities=20%  Similarity=0.309  Sum_probs=87.5

Q ss_pred             hcCCeeecceecccCCeeEEEEE-EcCCCEEEEEEeeccCc-----cchhHHHHHHHHHhcccccCCCeeeeecceecCC
Q 039630           32 ATNGFRTSNKIGEGGFGSVYKGR-LEDGTVVAVNVLSVESK-----QGETEFMSEVASMANINICHENLVKLHGGCIDGP  105 (174)
Q Consensus        32 ~~~~~~~~~~lg~G~~g~V~~~~-~~~~~~~avK~~~~~~~-----~~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~~~~  105 (174)
                      ..++|.+.+.||+|+||.||++. ..+++.||+|+++....     .....+.+|+.+++.++  |+||+++++.+...+
T Consensus         8 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~--h~~iv~~~~~~~~~~   85 (346)
T 1ua2_A            8 RAKRYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELS--HPNIIGLLDAFGHKS   85 (346)
T ss_dssp             -----CEEEEEEEETTEEEEEEECSSCCSEEEEEEC------------CTHHHHHHHHHHHCC--CTTBCCEEEEECCTT
T ss_pred             HhcccEEEeEEeecCCEEEEEEEECCCCcEEEEEEEecCCcchhhhhhhHHHHHHHHHHhhCC--CCCCCeEEEEEeeCC
Confidence            34679999999999999999999 45689999999975421     12346789999999999  999999999999888


Q ss_pred             CcccchhhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhcc
Q 039630          106 SRILAPLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEI  170 (174)
Q Consensus       106 ~~~lv~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  170 (174)
                      ..++++  ++.++ .+...+               ......+++..+..++.|++.||.|||++.
T Consensus        86 ~~~lv~--e~~~~-~l~~~~---------------~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~  132 (346)
T 1ua2_A           86 NISLVF--DFMET-DLEVII---------------KDNSLVLTPSHIKAYMLMTLQGLEYLHQHW  132 (346)
T ss_dssp             CCEEEE--ECCSE-EHHHHH---------------TTCCSSCCSSHHHHHHHHHHHHHHHHHHTT
T ss_pred             ceEEEE--EcCCC-CHHHHH---------------HhcCcCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            888888  55554 333322               112234677888899999999999999864

>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ...

Probab=99.63  E-value=6.8e-16  Score=113.85  Aligned_cols=117  Identities=17%  Similarity=0.271  Sum_probs=96.6

Q ss_pred             cCCeeecceecccCCeeEEEEEE-cCCCEEEEEEeeccC-ccchhHHHHHHHHHhcccccCCCeeeeecceecCCCcccc
Q 039630           33 TNGFRTSNKIGEGGFGSVYKGRL-EDGTVVAVNVLSVES-KQGETEFMSEVASMANINICHENLVKLHGGCIDGPSRILA  110 (174)
Q Consensus        33 ~~~~~~~~~lg~G~~g~V~~~~~-~~~~~~avK~~~~~~-~~~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~~~~~~~lv  110 (174)
                      .++|++.+.||+|+||.||++.. .++..+|+|+++... ......+.+|+.++..++  |+||+++++++...+..+++
T Consensus        32 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~E~~~l~~l~--h~~iv~~~~~~~~~~~~~lv  109 (360)
T 3eqc_A           32 DDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECN--SPYIVGFYGAFYSDGEISIC  109 (360)
T ss_dssp             GGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEECCCCHHHHHHHHHHHGGGGGCC--CTTBCCEEEEEEETTEEEEE
T ss_pred             cccceeeeeecCCCCeEEEEEEECCCCcEEEEEEeccccCHHHHHHHHHHHHHHHHCC--CCCEEEEeEEEEECCEEEEE
Confidence            45799999999999999999994 578999999997652 334567899999999998  99999999999998888888


Q ss_pred             hhhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhc
Q 039630          111 PLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEE  169 (174)
Q Consensus       111 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~  169 (174)
                      +  ++.+++.+...+.                ....+++..+..++.|++.||.|||++
T Consensus       110 ~--e~~~~~~L~~~l~----------------~~~~~~~~~~~~i~~~i~~~l~~lh~~  150 (360)
T 3eqc_A          110 M--EHMDGGSLDQVLK----------------KAGRIPEQILGKVSIAVIKGLTYLREK  150 (360)
T ss_dssp             E--CCCTTCBHHHHHH----------------HHSSCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred             E--ECCCCCCHHHHHH----------------HcCCCCHHHHHHHHHHHHHHHHHHHHh
Confidence            8  7776666655331                122478889999999999999999984

>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7

Probab=99.63  E-value=1.2e-15  Score=111.51  Aligned_cols=121  Identities=25%  Similarity=0.380  Sum_probs=95.8

Q ss_pred             hhcCCeeecceecccCCeeEEEEEEc-C----CCEEEEEEeeccC-ccchhHHHHHHHHHhcccccCCCeeeeecceecC
Q 039630           31 IATNGFRTSNKIGEGGFGSVYKGRLE-D----GTVVAVNVLSVES-KQGETEFMSEVASMANINICHENLVKLHGGCIDG  104 (174)
Q Consensus        31 ~~~~~~~~~~~lg~G~~g~V~~~~~~-~----~~~~avK~~~~~~-~~~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~~~  104 (174)
                      +..++|...+.||+|+||.||+|... +    +..||+|.++... ......+.+|+.++..++  |+||+++++.+...
T Consensus        41 i~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~--h~~iv~~~~~~~~~  118 (333)
T 1mqb_A           41 IHPSCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFS--HHNIIRLEGVISKY  118 (333)
T ss_dssp             CCTTTEEEEEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTTCCHHHHHHHHHHHHHHHTCC--CTTBCCEEEEECSS
T ss_pred             CChHHhhcccEEecCCCeEEEEEEEecCCCCccccEEEEEcCCCCCHHHHHHHHHHHHHHHhCC--CCCCCcEEEEEecC
Confidence            34467899999999999999999843 2    2369999997542 234556889999999999  99999999999988


Q ss_pred             CCcccchhhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhcc
Q 039630          105 PSRILAPLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEI  170 (174)
Q Consensus       105 ~~~~lv~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  170 (174)
                      +..++++  ++.+++.+...+.               .....+++..++.++.|++.||.|||++.
T Consensus       119 ~~~~lv~--e~~~~~~L~~~l~---------------~~~~~~~~~~~~~i~~qi~~aL~~LH~~~  167 (333)
T 1mqb_A          119 KPMMIIT--EYMENGALDKFLR---------------EKDGEFSVLQLVGMLRGIAAGMKYLANMN  167 (333)
T ss_dssp             SSEEEEE--ECCTTEEHHHHHH---------------HTTTCSCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             CCcEEEE--eCCCCCcHHHHHH---------------hCCCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            8888888  7777666655331               11235788999999999999999999863

>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A*

Probab=99.63  E-value=1e-15  Score=111.72  Aligned_cols=138  Identities=20%  Similarity=0.298  Sum_probs=100.9

Q ss_pred             hhHHhhcCCeeecceecccCCeeEEEEEEc-CC-----CEEEEEEeeccC-ccchhHHHHHHHHHhcc-cccCCCeeeee
Q 039630           27 NELKIATNGFRTSNKIGEGGFGSVYKGRLE-DG-----TVVAVNVLSVES-KQGETEFMSEVASMANI-NICHENLVKLH   98 (174)
Q Consensus        27 ~~~~~~~~~~~~~~~lg~G~~g~V~~~~~~-~~-----~~~avK~~~~~~-~~~~~~~~~e~~~l~~l-~~~h~~i~~~~   98 (174)
                      +.+....++|.+.+.||+|+||.||++... ++     ..+|+|.++... ......+.+|+.++..+ +  ||||++++
T Consensus        39 ~~~~~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~--h~~iv~~~  116 (333)
T 2i1m_A           39 EKWEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQ--HENIVNLL  116 (333)
T ss_dssp             GGGBCCTTSEEEEEEEEECSSEEEEEEEETTCSSSCCCCEEEEEEECTTCCHHHHHHHHHHHHHHHHHCC--CTTBCCEE
T ss_pred             ccccCCHHHceeeeEeccCCCcceEEEEecCCCcccchhHHHHHhcccccChHHHHHHHHHHHHHHhhcC--CCCeeeEE
Confidence            356677789999999999999999999842 22     479999997553 33456789999999999 7  99999999


Q ss_pred             cceecCCCcccchhhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhcc
Q 039630           99 GGCIDGPSRILAPLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEI  170 (174)
Q Consensus        99 ~~~~~~~~~~lv~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  170 (174)
                      +++...+..++++  ++.+++.|...+...........  ........+++..++.++.|++.||.|||++.
T Consensus       117 ~~~~~~~~~~lv~--e~~~~g~L~~~l~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~  184 (333)
T 2i1m_A          117 GACTHGGPVLVIT--EYCCYGDLLNFLRRKSRVLETDP--AFAIANSTASTRDLLHFSSQVAQGMAFLASKN  184 (333)
T ss_dssp             EEECSSSSCEEEE--ECCTTEEHHHHHHHHHHHHSCC---------CCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             EEEecCCceEEEE--ecCCCCcHHHHHHHhcccccccc--cccccccccCHHHHHHHHHHHHHHHHHHhcCC
Confidence            9999998888888  77766666554432111000000  00001234788999999999999999999863

>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ...

Probab=99.63  E-value=9.3e-16  Score=109.56  Aligned_cols=117  Identities=22%  Similarity=0.315  Sum_probs=95.2

Q ss_pred             CCeeecceecccCCeeEEEEEE-cCCCEEEEEEeeccC---ccchhHHHHHHHHHhcccccCCCeeeeecceecCCCccc
Q 039630           34 NGFRTSNKIGEGGFGSVYKGRL-EDGTVVAVNVLSVES---KQGETEFMSEVASMANINICHENLVKLHGGCIDGPSRIL  109 (174)
Q Consensus        34 ~~~~~~~~lg~G~~g~V~~~~~-~~~~~~avK~~~~~~---~~~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~~~~~~~l  109 (174)
                      ++|.+.+.||+|+||.||++.. .++..+|+|++....   ......+.+|+.++..++  |+||+++++++...+..++
T Consensus        14 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~--h~~i~~~~~~~~~~~~~~l   91 (284)
T 2vgo_A           14 DDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLR--HPNILRMYNYFHDRKRIYL   91 (284)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCC--CTTBCCEEEEEECSSEEEE
T ss_pred             hhceeeheecCCCCeEEEEEEEcCCCcEEEEEEEcccccchHHHHHHHHHHHHHHhcCC--CCCEeeEEEEEEcCCEEEE
Confidence            5699999999999999999994 467899999996442   233567889999999999  9999999999998888888


Q ss_pred             chhhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhcc
Q 039630          110 APLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEI  170 (174)
Q Consensus       110 v~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  170 (174)
                      ++  ++.+++.+...+..                ...+++..+..++.|++.||.|||++.
T Consensus        92 v~--e~~~~~~L~~~l~~----------------~~~~~~~~~~~~~~qi~~~l~~lH~~~  134 (284)
T 2vgo_A           92 ML--EFAPRGELYKELQK----------------HGRFDEQRSATFMEELADALHYCHERK  134 (284)
T ss_dssp             EE--CCCTTEEHHHHHHH----------------HSSCCHHHHHHHHHHHHHHHHHHHTTT
T ss_pred             EE--EeCCCCcHHHHHHh----------------cCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            88  77666666553321                124788899999999999999999863

>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A

Probab=99.62  E-value=1.5e-15  Score=110.67  Aligned_cols=109  Identities=21%  Similarity=0.260  Sum_probs=89.7

Q ss_pred             ceecccCCeeEEEEE-EcCCCEEEEEEeeccCccchhHHHHHHHHHhcccccCCCeeeeecceecCCCcccchhhhhhhh
Q 039630           40 NKIGEGGFGSVYKGR-LEDGTVVAVNVLSVESKQGETEFMSEVASMANINICHENLVKLHGGCIDGPSRILAPLQASIEA  118 (174)
Q Consensus        40 ~~lg~G~~g~V~~~~-~~~~~~~avK~~~~~~~~~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~~~~~~~lv~~~~~~~~  118 (174)
                      +.||+|+||.||+|. ..+++.||+|++..   .....+.+|+.++..+. .||||+++++++......++++  ++.++
T Consensus        17 ~~lG~G~~g~V~~~~~~~~~~~vavK~~~~---~~~~~~~~e~~~l~~l~-~h~niv~~~~~~~~~~~~~lv~--e~~~~   90 (325)
T 3kn6_A           17 KPLGEGSFSICRKCVHKKSNQAFAVKIISK---RMEANTQKEITALKLCE-GHPNIVKLHEVFHDQLHTFLVM--ELLNG   90 (325)
T ss_dssp             CCSEEETTEEEEEEEETTTCCEEEEEEEEG---GGHHHHHHHHHHHHHTT-TCTTBCCEEEEEECSSEEEEEE--CCCCS
T ss_pred             CccccCCCeEEEEEEECCCCCEEEEEEECh---hhhhhHHHHHHHHHHhc-CCCCeeEEEEEEEcCCEEEEEE--EccCC
Confidence            789999999999999 45789999999973   34456788999999885 5999999999999988888888  77776


Q ss_pred             hhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhcc
Q 039630          119 LFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEI  170 (174)
Q Consensus       119 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  170 (174)
                      +.+...+.                ....+++..+..++.|++.||+|||++.
T Consensus        91 ~~L~~~l~----------------~~~~~~~~~~~~i~~qi~~~l~~LH~~~  126 (325)
T 3kn6_A           91 GELFERIK----------------KKKHFSETEASYIMRKLVSAVSHMHDVG  126 (325)
T ss_dssp             CBHHHHHH----------------HCSCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             CcHHHHHH----------------hcCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            66655331                1235789999999999999999999753

>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A

Probab=99.62  E-value=7.9e-16  Score=113.00  Aligned_cols=114  Identities=16%  Similarity=0.272  Sum_probs=91.9

Q ss_pred             CCeeecceecccCCeeEEEEE-EcCCCEEEEEEeeccCccchhHHHHHHHHHhcccccCCCeeeeecceecCCCcccchh
Q 039630           34 NGFRTSNKIGEGGFGSVYKGR-LEDGTVVAVNVLSVESKQGETEFMSEVASMANINICHENLVKLHGGCIDGPSRILAPL  112 (174)
Q Consensus        34 ~~~~~~~~lg~G~~g~V~~~~-~~~~~~~avK~~~~~~~~~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~~~~~~~lv~~  112 (174)
                      ++|.+.+.||+|+||.||+|. ..+++.+|+|+++....    ...+|+.++.++. .||||+++++++...+..++++ 
T Consensus        22 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~----~~~~E~~~l~~~~-~hp~iv~~~~~~~~~~~~~lv~-   95 (342)
T 2qr7_A           22 DGYEVKEDIGVGSYSVCKRCIHKATNMEFAVKIIDKSKR----DPTEEIEILLRYG-QHPNIITLKDVYDDGKYVYVVT-   95 (342)
T ss_dssp             HHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTTC----CCHHHHHHHHHHT-TSTTBCCEEEEEECSSEEEEEE-
T ss_pred             ccEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEcccC----ChHHHHHHHHHhc-CCCCcCeEEEEEEcCCEEEEEE-
Confidence            469999999999999999999 45788999999975432    2356788887772 3999999999999988888888 


Q ss_pred             hhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhcc
Q 039630          113 QASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEI  170 (174)
Q Consensus       113 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  170 (174)
                       ++.+++.+...+.                ....+++..+..++.|++.||.|||++.
T Consensus        96 -E~~~gg~L~~~i~----------------~~~~~~~~~~~~~~~qi~~al~~lH~~g  136 (342)
T 2qr7_A           96 -ELMKGGELLDKIL----------------RQKFFSEREASAVLFTITKTVEYLHAQG  136 (342)
T ss_dssp             -CCCCSCBHHHHHH----------------TCTTCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             -eCCCCCcHHHHHH----------------HcCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence             7777776665432                1234789999999999999999999863

>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A*

Probab=99.62  E-value=1.4e-15  Score=111.03  Aligned_cols=117  Identities=21%  Similarity=0.300  Sum_probs=94.2

Q ss_pred             CCeeecceecccCCeeEEEEEE-cCCCEEEEEEeeccCc--cchhHHHHHHHHHhcccccCCCeeeeecceecCCCcccc
Q 039630           34 NGFRTSNKIGEGGFGSVYKGRL-EDGTVVAVNVLSVESK--QGETEFMSEVASMANINICHENLVKLHGGCIDGPSRILA  110 (174)
Q Consensus        34 ~~~~~~~~lg~G~~g~V~~~~~-~~~~~~avK~~~~~~~--~~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~~~~~~~lv  110 (174)
                      ++|++.+.||+|+||.||++.. .++..||+|++.....  .....+.+|+.++..++  |+||+++++++...+..+++
T Consensus        25 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~--h~~iv~~~~~~~~~~~~~lv  102 (331)
T 4aaa_A           25 EKYENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLR--HENLVNLLEVCKKKKRWYLV  102 (331)
T ss_dssp             GGEEEEEEGGGGTTSSEEEEEETTTCCEEEEEEEESCSSCHHHHHHHHHHHHHHHHCC--CTTBCCEEEEEEETTEEEEE
T ss_pred             hhheeeeEEeecCCEEEEEEEECCCCceEEEEEEecCCCchHHHHHHHHHHHHHhhCC--CCCEeeEEEEeecCCEEEEE
Confidence            4699999999999999999994 5689999999865532  23455789999999999  99999999999998888888


Q ss_pred             hhhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhcc
Q 039630          111 PLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEI  170 (174)
Q Consensus       111 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  170 (174)
                      +  ++.+++.+....                .....+++..+..++.|++.||.|||++.
T Consensus       103 ~--e~~~~~~l~~~~----------------~~~~~~~~~~~~~~~~qi~~~l~~LH~~~  144 (331)
T 4aaa_A          103 F--EFVDHTILDDLE----------------LFPNGLDYQVVQKYLFQIINGIGFCHSHN  144 (331)
T ss_dssp             E--ECCSEEHHHHHH----------------HSTTCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             E--ecCCcchHHHHH----------------hhccCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            8  666665554321                11224788999999999999999999864

>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens}

Probab=99.62  E-value=3.5e-16  Score=113.97  Aligned_cols=117  Identities=25%  Similarity=0.340  Sum_probs=89.8

Q ss_pred             CCeeecceecccCCeeEEEEEE-cCCCEEEEEEeeccCc-cchhHHHHHHHHHhcccccCCCeeeeecceecCCCcccch
Q 039630           34 NGFRTSNKIGEGGFGSVYKGRL-EDGTVVAVNVLSVESK-QGETEFMSEVASMANINICHENLVKLHGGCIDGPSRILAP  111 (174)
Q Consensus        34 ~~~~~~~~lg~G~~g~V~~~~~-~~~~~~avK~~~~~~~-~~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~~~~~~~lv~  111 (174)
                      ++|.+.+.||+|+||.||++.. .++..||+|+++.... .....+.+|+.+++.++  |+||+++++++...+..++++
T Consensus         2 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~--h~~iv~~~~~~~~~~~~~lv~   79 (324)
T 3mtl_A            2 ETYIKLDKLGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLK--HANIVTLHDIIHTEKSLTLVF   79 (324)
T ss_dssp             CSEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECC------CCCCCCCHHHHSCCC--CTTBCCEEEEEECSSCEEEEE
T ss_pred             CceEEEEEEcCCCCEEEEEEEECCCCcEEEEEEEecccccccchhHHHHHHHHHhcC--CCCCCeeeeEEeeCCEEEEEe
Confidence            4689999999999999999994 5789999999975432 22234567999999999  999999999999998888888


Q ss_pred             hhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhcc
Q 039630          112 LQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEI  170 (174)
Q Consensus       112 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  170 (174)
                        ++.++ .+...+.               .....+++..+..++.|++.||.|||++.
T Consensus        80 --e~~~~-~l~~~~~---------------~~~~~~~~~~~~~~~~qi~~aL~~LH~~~  120 (324)
T 3mtl_A           80 --EYLDK-DLKQYLD---------------DCGNIINMHNVKLFLFQLLRGLAYCHRQK  120 (324)
T ss_dssp             --ECCSE-EHHHHHH---------------HTTTCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             --ccccc-CHHHHHH---------------hcCCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence              55543 3333221               11224788899999999999999999753

>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A*

Probab=99.62  E-value=5e-16  Score=110.57  Aligned_cols=122  Identities=20%  Similarity=0.232  Sum_probs=94.7

Q ss_pred             cCCeeecceecccCCeeEEEEEE-cCCCEEEEEEeeccC--ccchhHHHHHHHHHhcccccCCCeeeeecceec--CCCc
Q 039630           33 TNGFRTSNKIGEGGFGSVYKGRL-EDGTVVAVNVLSVES--KQGETEFMSEVASMANINICHENLVKLHGGCID--GPSR  107 (174)
Q Consensus        33 ~~~~~~~~~lg~G~~g~V~~~~~-~~~~~~avK~~~~~~--~~~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~~--~~~~  107 (174)
                      .++|++.+.||+|+||.||++.. .+++.+|+|.+....  ....+.+.+|+.+++.++  |+||+++++.+..  ....
T Consensus         5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~--h~~i~~~~~~~~~~~~~~~   82 (279)
T 2w5a_A            5 AEDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELK--HPNIVRYYDRIIDRTNTTL   82 (279)
T ss_dssp             GGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCC--CTTBCCEEEEEEEGGGTEE
T ss_pred             hhheeeehhccCCCCcEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhcC--CCCCCeEEEEEecCCCceE
Confidence            35799999999999999999994 578999999997552  334567899999999999  9999999998754  4556


Q ss_pred             ccchhhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhcc
Q 039630          108 ILAPLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEI  170 (174)
Q Consensus       108 ~lv~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  170 (174)
                      ++++  ++.+++.+...+...            ......+++..++.++.|++.||.|||++.
T Consensus        83 ~lv~--e~~~~~~L~~~l~~~------------~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~  131 (279)
T 2w5a_A           83 YIVM--EYCEGGDLASVITKG------------TKERQYLDEEFVLRVMTQLTLALKECHRRS  131 (279)
T ss_dssp             EEEE--ECCTTEEHHHHHHHH------------HHTTCCCCHHHHHHHHHHHHHHHHHHHHHC
T ss_pred             EEEE--eCCCCCCHHHHHHhh------------cccCCCCCHHHHHHHHHHHHHHHHHHhccc
Confidence            6777  666666665533211            111234789999999999999999999875

>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A*

Probab=99.62  E-value=3.3e-16  Score=116.25  Aligned_cols=119  Identities=29%  Similarity=0.310  Sum_probs=87.6

Q ss_pred             hcCCeeecceecccCCeeEEEEE-EcCCCEEEEEEeeccC---ccchhHHHHHHHH-HhcccccCCCeeeeecceecCCC
Q 039630           32 ATNGFRTSNKIGEGGFGSVYKGR-LEDGTVVAVNVLSVES---KQGETEFMSEVAS-MANINICHENLVKLHGGCIDGPS  106 (174)
Q Consensus        32 ~~~~~~~~~~lg~G~~g~V~~~~-~~~~~~~avK~~~~~~---~~~~~~~~~e~~~-l~~l~~~h~~i~~~~~~~~~~~~  106 (174)
                      ..++|.+++.||+|+||.||++. ..++..+|+|+++...   ......+..|..+ ++.++  ||||+++++.+...+.
T Consensus        36 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~e~~~ll~~~~--hp~Iv~l~~~~~~~~~  113 (373)
T 2r5t_A           36 KPSDFHFLKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVK--HPFLVGLHFSFQTADK  113 (373)
T ss_dssp             CGGGEEEEEEEECCTTCEEEEEEETTTCCEEEEEEEEGGGBC-------------CCBCCCC--CTTBCCEEEEEECSSE
T ss_pred             ChhheEEEEEEeeCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHHhCC--CCCCCCEEEEEEeCCE
Confidence            34679999999999999999999 4568899999997552   2233456667665 46677  9999999999999998


Q ss_pred             cccchhhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhcc
Q 039630          107 RILAPLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEI  170 (174)
Q Consensus       107 ~~lv~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  170 (174)
                      .++++  ++.+++.+...+.                ....+++..+..++.||+.||+|||++.
T Consensus       114 ~~lv~--E~~~gg~L~~~l~----------------~~~~~~~~~~~~~~~qi~~aL~~LH~~g  159 (373)
T 2r5t_A          114 LYFVL--DYINGGELFYHLQ----------------RERCFLEPRARFYAAEIASALGYLHSLN  159 (373)
T ss_dssp             EEEEE--ECCCSCBHHHHHH----------------HHSSCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             EEEEE--eCCCCCcHHHHHH----------------hcCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            88888  7777777665432                1234788888999999999999999864

>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis}

Probab=99.62  E-value=1.3e-15  Score=110.27  Aligned_cols=118  Identities=18%  Similarity=0.162  Sum_probs=95.7

Q ss_pred             cCCeeecceecccCCeeEEEEEE-cCCCEEEEEEeeccCc---cchhHHHHHHHHHhcccccCCCeeeeecceecCCCcc
Q 039630           33 TNGFRTSNKIGEGGFGSVYKGRL-EDGTVVAVNVLSVESK---QGETEFMSEVASMANINICHENLVKLHGGCIDGPSRI  108 (174)
Q Consensus        33 ~~~~~~~~~lg~G~~g~V~~~~~-~~~~~~avK~~~~~~~---~~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~~~~~~~  108 (174)
                      .++|++.+.||+|+||.||++.. .+++.||+|+++....   .....+.+|+.++..++  ||||+++++++...+..+
T Consensus        33 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~--hp~iv~~~~~~~~~~~~~  110 (309)
T 2h34_A           33 FGPYRLRRLVGRGGMGDVYEAEDTVRERIVALKLMSETLSSDPVFRTRMQREARTAGRLQ--EPHVVPIHDFGEIDGQLY  110 (309)
T ss_dssp             -CCEEEEEEEEECSSSEEEEEEETTTTEEEEEEECGGGGGGSHHHHHHHHHHHHHHTTCC--CTTBCCEEEEEEETTEEE
T ss_pred             eccEEEEEEEcCCCCeeEEEEEEcCCCeEEEEEecCcccccCHHHHHHHHHHHHHHhhcC--CCCeeEEEEEEeeCCeEE
Confidence            36799999999999999999994 5788999999975522   22467889999999999  999999999999988888


Q ss_pred             cchhhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhcc
Q 039630          109 LAPLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEI  170 (174)
Q Consensus       109 lv~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  170 (174)
                      +++  ++.+++.+...+.                ....+++..+..++.|++.||.|||++.
T Consensus       111 lv~--e~~~~~~L~~~l~----------------~~~~~~~~~~~~i~~qi~~~l~~lH~~~  154 (309)
T 2h34_A          111 VDM--RLINGVDLAAMLR----------------RQGPLAPPRAVAIVRQIGSALDAAHAAG  154 (309)
T ss_dssp             EEE--ECCCCEEHHHHHH----------------HHCSCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             EEE--EecCCCCHHHHHH----------------hcCCCCHHHHHHHHHHHHHHHHHHHHCc
Confidence            888  6666666555331                1124788999999999999999999863

>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A*

Probab=99.62  E-value=9.1e-16  Score=111.94  Aligned_cols=115  Identities=18%  Similarity=0.212  Sum_probs=91.8

Q ss_pred             cCCeeecceecccCCeeEEEEE-EcCCCEEEEEEeeccCccchhHHHHHHHHHhcc-cccCCCeeeeecceecCCCcccc
Q 039630           33 TNGFRTSNKIGEGGFGSVYKGR-LEDGTVVAVNVLSVESKQGETEFMSEVASMANI-NICHENLVKLHGGCIDGPSRILA  110 (174)
Q Consensus        33 ~~~~~~~~~lg~G~~g~V~~~~-~~~~~~~avK~~~~~~~~~~~~~~~e~~~l~~l-~~~h~~i~~~~~~~~~~~~~~lv  110 (174)
                      .++|.+.+.||+|+||.||+|. ..+++.||+|++....  ....+.+|+.+++.+ +  |+||+++++.+...+..+++
T Consensus         8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~E~~~l~~l~~--h~~i~~~~~~~~~~~~~~lv   83 (330)
T 2izr_A            8 GPNFRVGKKIGCGNFGELRLGKNLYTNEYVAIKLEPMKS--RAPQLHLEYRFYKQLGS--GDGIPQVYYFGPCGKYNAMV   83 (330)
T ss_dssp             TTTEEEEEECCC-CTTSEEEEEETTTTEEEEEEEEETTC--SSCCHHHHHHHHHHHCS--CTTSCCEEEEEEETTEEEEE
T ss_pred             cCCeEEEEEeeccCCceEEEEEECCCCcEEEEEEecccc--chHHHHHHHHHHHHhhC--CCCCCEEEEEEecCCccEEE
Confidence            4679999999999999999999 4678999999987542  234688999999999 6  99999999999998888888


Q ss_pred             hhhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhc
Q 039630          111 PLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEE  169 (174)
Q Consensus       111 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~  169 (174)
                      +  ++. ++.+...+.               .....+++..++.++.|++.||+|||++
T Consensus        84 ~--e~~-~~~L~~~~~---------------~~~~~~~~~~~~~i~~qi~~~l~~LH~~  124 (330)
T 2izr_A           84 L--ELL-GPSLEDLFD---------------LCDRTFSLKTVLMIAIQLISRMEYVHSK  124 (330)
T ss_dssp             E--ECC-CCBHHHHHH---------------HTTTCCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             E--EeC-CCCHHHHHH---------------HcCCCCCHHHHHHHHHHHHHHHHHHHhC
Confidence            8  555 444443221               0123588999999999999999999986

>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A*

Probab=99.62  E-value=1.7e-15  Score=110.16  Aligned_cols=116  Identities=16%  Similarity=0.219  Sum_probs=89.3

Q ss_pred             CCeeecceecccCCeeEEEEE-EcCCCEEEEEEeeccC--------ccchhHHHHHHHHHhcccccCCCeeeeecceecC
Q 039630           34 NGFRTSNKIGEGGFGSVYKGR-LEDGTVVAVNVLSVES--------KQGETEFMSEVASMANINICHENLVKLHGGCIDG  104 (174)
Q Consensus        34 ~~~~~~~~lg~G~~g~V~~~~-~~~~~~~avK~~~~~~--------~~~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~~~  104 (174)
                      ++|.+.+.||+|+||.||++. ..++..||+|++....        ......+.+|+.+++.++  |+||+++++++...
T Consensus        10 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~--h~~i~~~~~~~~~~   87 (322)
T 2ycf_A           10 DEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLN--HPCIIKIKNFFDAE   87 (322)
T ss_dssp             HHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECC---------------CHHHHHHHHHHCC--CTTBCCEEEEEESS
T ss_pred             hceeEeeEEecCCCEEEEEEEEcCCCcEEEEEEeehhhhhhcccccchhhhhHHHHHHHHHhCC--CCCCceEeeEEcCC
Confidence            469999999999999999998 4568899999996442        122345889999999999  99999999998665


Q ss_pred             CCcccchhhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhcc
Q 039630          105 PSRILAPLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEI  170 (174)
Q Consensus       105 ~~~~lv~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  170 (174)
                      + .++++  ++.+++.+...+                .....+++..+..++.|++.||.|||++.
T Consensus        88 ~-~~lv~--e~~~~~~L~~~~----------------~~~~~~~~~~~~~~~~qi~~~l~~lH~~~  134 (322)
T 2ycf_A           88 D-YYIVL--ELMEGGELFDKV----------------VGNKRLKEATCKLYFYQMLLAVQYLHENG  134 (322)
T ss_dssp             S-EEEEE--ECCTTEETHHHH----------------STTCCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             c-eEEEE--ecCCCCcHHHHH----------------hccCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            4 67777  666666665433                12235788999999999999999999863

>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X*

Probab=99.62  E-value=1.3e-15  Score=111.74  Aligned_cols=123  Identities=15%  Similarity=0.177  Sum_probs=94.6

Q ss_pred             cCCeeecceecccCCeeEEEEEEcCCCEEEEEEeeccCccc-----------------hhHHHHHHHHHhcccccCCCee
Q 039630           33 TNGFRTSNKIGEGGFGSVYKGRLEDGTVVAVNVLSVESKQG-----------------ETEFMSEVASMANINICHENLV   95 (174)
Q Consensus        33 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~avK~~~~~~~~~-----------------~~~~~~e~~~l~~l~~~h~~i~   95 (174)
                      .++|.+.+.||+|+||.||++.. ++..||+|++.......                 ...+.+|+.++..++  |+||+
T Consensus        30 ~~~y~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~--h~~i~  106 (348)
T 2pml_X           30 INDYRIIRTLNQGKFNKIILCEK-DNKFYALKKYEKSLLEKKRDFTKSNNDKISIKSKYDDFKNELQIITDIK--NEYCL  106 (348)
T ss_dssp             ETTEEEEEEEECCSSCCEEEEEE-TTEEEEEEEEEHHHHSSCEEECCCSSSSCCEEEHHHHHHHHHHHHTTCC--CTTBC
T ss_pred             cCceEEEEEEcCCCCeEEEEEEc-CCceEEEEEeecccccchhhhccccchhhhHHhHHHHHHHHHHHHHhCC--CCCcc
Confidence            46899999999999999999998 89999999997542111                 178899999999999  99999


Q ss_pred             eeecceecCCCcccchhhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhh
Q 039630           96 KLHGGCIDGPSRILAPLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHE  168 (174)
Q Consensus        96 ~~~~~~~~~~~~~lv~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~  168 (174)
                      ++++++...+..++++  ++.+++.+...+...      ....  ......+++..+..++.|++.||.|||+
T Consensus       107 ~~~~~~~~~~~~~lv~--e~~~~~~L~~~~~~~------~~l~--~~~~~~~~~~~~~~i~~qi~~~l~~lH~  169 (348)
T 2pml_X          107 TCEGIITNYDEVYIIY--EYMENDSILKFDEYF------FVLD--KNYTCFIPIQVIKCIIKSVLNSFSYIHN  169 (348)
T ss_dssp             CCSEEEESSSEEEEEE--ECCTTCBSSEESSSE------ESSC--SSSCCCCCHHHHHHHHHHHHHHHHHHHH
T ss_pred             eEEEEEeeCCeEEEEE--eccCCCcHHHHHHHh------hhhh--hccccCCCHHHHHHHHHHHHHHHHHHhc
Confidence            9999999888877777  655555544321000      0011  1113468999999999999999999998

>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II}

Probab=99.62  E-value=2.4e-15  Score=111.95  Aligned_cols=121  Identities=17%  Similarity=0.181  Sum_probs=83.8

Q ss_pred             HHhhcCCeeecceecccCCeeEEEEE-EcCCCEEEEEEeeccCccchhHHHHHHHHHhcccccCCCeeeeecceecCCC-
Q 039630           29 LKIATNGFRTSNKIGEGGFGSVYKGR-LEDGTVVAVNVLSVESKQGETEFMSEVASMANINICHENLVKLHGGCIDGPS-  106 (174)
Q Consensus        29 ~~~~~~~~~~~~~lg~G~~g~V~~~~-~~~~~~~avK~~~~~~~~~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~~~~~-  106 (174)
                      +....++|.+.+.||+|+||.||+|. ..++..||+|.+.....    ...+|+.+++.++  |+||+++++++...+. 
T Consensus         2 l~~~~~~y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~~~~~~~----~~~~E~~il~~l~--hpnIv~l~~~~~~~~~~   75 (383)
T 3eb0_A            2 LETSSKKYSLGKTLGTGSFGIVCEVFDIESGKRFALKKVLQDPR----YKNRELDIMKVLD--HVNIIKLVDYFYTTGDE   75 (383)
T ss_dssp             ----CTTEEEEEEEECC-CEEEEEEEETTTCCEEEEEEEECCTT----SCCHHHHHHTTCC--CTTBCCEEEEEEEC---
T ss_pred             CccccceEEEEEEEEeccCEEEEEEEECCCCCEEEEEEEecCcc----hHHHHHHHHHHcC--CCCccchhheeeecCcc
Confidence            34456789999999999999999998 56789999999964422    2237999999999  9999999999855432 


Q ss_pred             -------------------------------------cccchhhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCH
Q 039630          107 -------------------------------------RILAPLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNW  149 (174)
Q Consensus       107 -------------------------------------~~lv~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~  149 (174)
                                                           .++++  ++.++ .+...+.         ..   ......+++
T Consensus        76 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~--e~~~~-~L~~~l~---------~~---~~~~~~l~~  140 (383)
T 3eb0_A           76 EPKPPQPPDDHNKLGGKNNGVNNHHKSVIVNPSQNKYLNVIM--EYVPD-TLHKVLK---------SF---IRSGRSIPM  140 (383)
T ss_dssp             ----------------------------------CCEEEEEE--CCCSE-EHHHHHH---------HH---HHTTCCCCH
T ss_pred             cccccccccccccccccccccccccccccccCCCceEEEEEE--ecCCc-cHHHHHH---------HH---HhcCCCCCH
Confidence                                                 34444  44332 2111110         00   112345889


Q ss_pred             HHHHHHHHHHHHHHHHhhhcc
Q 039630          150 IARREIALGIARGLAYIHEEI  170 (174)
Q Consensus       150 ~~~~~~~~qi~~gl~yLH~~~  170 (174)
                      ..+..++.|++.||+|||++.
T Consensus       141 ~~~~~i~~qi~~aL~~LH~~g  161 (383)
T 3eb0_A          141 NLISIYIYQLFRAVGFIHSLG  161 (383)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTT
T ss_pred             HHHHHHHHHHHHHHHHHHHCc
Confidence            999999999999999999753

>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ...

Probab=99.61  E-value=1.6e-15  Score=108.70  Aligned_cols=121  Identities=29%  Similarity=0.468  Sum_probs=92.0

Q ss_pred             hHHhhcCCeeecceecccCCeeEEEEEEcCCCEEEEEEeeccC--ccchhHHHHHHHHHhcccccCCCeeeeecceecCC
Q 039630           28 ELKIATNGFRTSNKIGEGGFGSVYKGRLEDGTVVAVNVLSVES--KQGETEFMSEVASMANINICHENLVKLHGGCIDGP  105 (174)
Q Consensus        28 ~~~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~avK~~~~~~--~~~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~~~~  105 (174)
                      .+.+..++|++.+.||+|+||.||++...  ..+|+|+++...  ......+.+|+.+++.++  |+||++++++. ..+
T Consensus        18 ~~ei~~~~y~~~~~lG~G~~g~Vy~~~~~--~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~--h~~iv~~~~~~-~~~   92 (289)
T 3og7_A           18 DWEIPDGQITVGQRIGSGSFGTVYKGKWH--GDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTR--HVNILLFMGYS-TAP   92 (289)
T ss_dssp             CCBCCTTSCEEEEEEEECSSEEEEEEESS--SEEEEEEESCSSCCHHHHHHHHHHHHHHTTCC--CTTBCCEEEEE-CSS
T ss_pred             CCccCccceeeeeEecCCCCeEEEEEEEc--CceEEEEEeccCCCHHHHHHHHHHHHHHHhCC--CCcEEEEEeec-cCC
Confidence            34455678999999999999999999753  359999997553  234567899999999999  99999999955 445


Q ss_pred             CcccchhhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhcc
Q 039630          106 SRILAPLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEI  170 (174)
Q Consensus       106 ~~~lv~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  170 (174)
                      ..++++  ++.+++.+...+.               .....+++..+..++.|++.||.|||++.
T Consensus        93 ~~~lv~--e~~~~~~L~~~l~---------------~~~~~~~~~~~~~i~~qi~~~L~~lH~~~  140 (289)
T 3og7_A           93 QLAIVT--QWCEGSSLYHHLH---------------ASETKFEMKKLIDIARQTARGMDYLHAKS  140 (289)
T ss_dssp             SCEEEE--ECCCEEEHHHHHT---------------TC---CCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             ccEEEE--EecCCCcHHHHHh---------------hccCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            566776  6666666655331               12235788999999999999999999864

>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens}

Probab=99.61  E-value=4.1e-16  Score=113.02  Aligned_cols=127  Identities=26%  Similarity=0.481  Sum_probs=101.2

Q ss_pred             eechhhHHhhcCCeeecceecccCCeeEEEEEEcCCCEEEEEEeeccC--ccchhHHHHHHHHHhcccccCCCeeeeecc
Q 039630           23 KISYNELKIATNGFRTSNKIGEGGFGSVYKGRLEDGTVVAVNVLSVES--KQGETEFMSEVASMANINICHENLVKLHGG  100 (174)
Q Consensus        23 ~~~~~~~~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~avK~~~~~~--~~~~~~~~~e~~~l~~l~~~h~~i~~~~~~  100 (174)
                      ....+.+.+..++|++.+.||+|+||.||+|....  .+++|+++...  ......+.+|+.+++.++  |+||+++++.
T Consensus        22 ~~~~~~~~i~~~~~~~~~~lg~G~~g~V~~~~~~~--~~avk~~~~~~~~~~~~~~~~~e~~~l~~l~--h~~iv~~~~~   97 (319)
T 2y4i_B           22 SIFLQEWDIPFEQLEIGELIGKGRFGQVYHGRWHG--EVAIRLIDIERDNEDQLKAFKREVMAYRQTR--HENVVLFMGA   97 (319)
T ss_dssp             CCCGGGSSSCCSCEECCCBCCCSSSSEEEEEEESS--SEEEEECCCCSCCCCCCCCCCTTGGGGTTCC--CTTBCCCCEE
T ss_pred             ccccccccCCHHHeEEeeEeccCCceEEEEEEEcC--eEEEEEeecCCCCHHHHHHHHHHHHHHhcCC--CCCEeEEEEE
Confidence            35567788888999999999999999999998643  49999997542  233456788999999999  9999999999


Q ss_pred             eecCCCcccchhhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhcc
Q 039630          101 CIDGPSRILAPLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEI  170 (174)
Q Consensus       101 ~~~~~~~~lv~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  170 (174)
                      +...+..++++  ++.+++.+...+.               .....+++..+..++.|++.||.|||++.
T Consensus        98 ~~~~~~~~iv~--e~~~~~~L~~~l~---------------~~~~~~~~~~~~~i~~qi~~al~~lH~~~  150 (319)
T 2y4i_B           98 CMSPPHLAIIT--SLCKGRTLYSVVR---------------DAKIVLDVNKTRQIAQEIVKGMGYLHAKG  150 (319)
T ss_dssp             EECSSCEEEEC--BCCCSEEHHHHTT---------------SSCCCCCSHHHHHHHHHHHHHHHHHHHTT
T ss_pred             EecCCceEEEe--ecccCCcHHHHHH---------------hcCCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            99988888888  6666666655331               12235788899999999999999999863

>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A

Probab=99.61  E-value=1.2e-15  Score=109.15  Aligned_cols=122  Identities=18%  Similarity=0.233  Sum_probs=88.3

Q ss_pred             hhcCCeeecceecccCCeeEEEEE-EcCCCEEEEEEeeccC-ccchhH-HHHHHHHHhcccccCCCeeeeecceecCCCc
Q 039630           31 IATNGFRTSNKIGEGGFGSVYKGR-LEDGTVVAVNVLSVES-KQGETE-FMSEVASMANINICHENLVKLHGGCIDGPSR  107 (174)
Q Consensus        31 ~~~~~~~~~~~lg~G~~g~V~~~~-~~~~~~~avK~~~~~~-~~~~~~-~~~e~~~l~~l~~~h~~i~~~~~~~~~~~~~  107 (174)
                      ...++|++.+.||+|+||.||++. ..+++.+|+|+++... ...... +..+...++.++  ||||+++++.+...+..
T Consensus         4 i~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~--h~~iv~~~~~~~~~~~~   81 (290)
T 3fme_A            4 VKADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVD--CPFTVTFYGALFREGDV   81 (290)
T ss_dssp             CCGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEC---CHHHHHHHHHHHHHHHTTCC--CTTBCCEEEEEECSSSE
T ss_pred             ccHHhhhhHHhcCCCCCeEEEEEEecCCCeEEEEEEeecccCcHHHHHHHHHHHHHHHhCC--CCeEEEEeeeeeccCCE
Confidence            345679999999999999999999 4678999999997542 222223 334444577777  99999999999999888


Q ss_pred             ccchhhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhc
Q 039630          108 ILAPLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEE  169 (174)
Q Consensus       108 ~lv~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~  169 (174)
                      ++++  ++.++ .+...+..         .   ......+++..+..++.|++.||.|||++
T Consensus        82 ~lv~--e~~~~-~l~~~l~~---------~---~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  128 (290)
T 3fme_A           82 WICM--ELMDT-SLDKFYKQ---------V---IDKGQTIPEDILGKIAVSIVKALEHLHSK  128 (290)
T ss_dssp             EEEE--ECCSE-EHHHHHHH---------H---HHTTCCCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred             EEEE--ehhcc-chHHHHHH---------H---HhcCCCCCHHHHHHHHHHHHHHHHHHhhc
Confidence            8888  55543 22221100         0   11233588999999999999999999986

>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A*

Probab=99.61  E-value=2.5e-15  Score=109.12  Aligned_cols=115  Identities=26%  Similarity=0.365  Sum_probs=90.3

Q ss_pred             CeeecceecccCCeeEEEEEE-----cCCCEEEEEEeeccC-ccchhHHHHHHHHHhcccccCCCeeeeecceecC--CC
Q 039630           35 GFRTSNKIGEGGFGSVYKGRL-----EDGTVVAVNVLSVES-KQGETEFMSEVASMANINICHENLVKLHGGCIDG--PS  106 (174)
Q Consensus        35 ~~~~~~~lg~G~~g~V~~~~~-----~~~~~~avK~~~~~~-~~~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~~~--~~  106 (174)
                      .|++++.||+|+||.||.+.+     .+++.||+|+++... ......+.+|+.+++.++  |+||+++++++...  ..
T Consensus        32 ~~~~~~~lG~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~--h~~iv~~~~~~~~~~~~~  109 (318)
T 3lxp_A           32 YLKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTLY--HEHIIKYKGCCEDAGAAS  109 (318)
T ss_dssp             GEEEEEEEEECSSEEEEEEEECSCC--CCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCC--CTTBCCEEEEEEETTTTE
T ss_pred             HHhhhheecCCCCeEEEEEEEccCCCCCCcEEEEEEeccccChHHHHHHHHHHHHHHhCC--CcchhhEEEEEecCCCce
Confidence            458899999999999998864     357899999997553 334567899999999999  99999999999875  34


Q ss_pred             cccchhhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhcc
Q 039630          107 RILAPLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEI  170 (174)
Q Consensus       107 ~~lv~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  170 (174)
                      .++++  ++.+++.+...+                 ....+++..++.++.|++.||.|||++.
T Consensus       110 ~~lv~--e~~~~~~L~~~l-----------------~~~~~~~~~~~~i~~~l~~~l~~LH~~~  154 (318)
T 3lxp_A          110 LQLVM--EYVPLGSLRDYL-----------------PRHSIGLAQLLLFAQQICEGMAYLHAQH  154 (318)
T ss_dssp             EEEEE--CCCTTCBHHHHG-----------------GGSCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             EEEEE--ecccCCcHHHHH-----------------hhCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            45666  666666665532                 1123788999999999999999999863

>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens}

Probab=99.61  E-value=1.5e-15  Score=109.92  Aligned_cols=116  Identities=21%  Similarity=0.247  Sum_probs=85.1

Q ss_pred             cCCeeecceecccCCeeEEEEEE-cCCCEEEEEEeeccCccchhHHHHHHHHHhcccccCCCeeeeecceecC-------
Q 039630           33 TNGFRTSNKIGEGGFGSVYKGRL-EDGTVVAVNVLSVESKQGETEFMSEVASMANINICHENLVKLHGGCIDG-------  104 (174)
Q Consensus        33 ~~~~~~~~~lg~G~~g~V~~~~~-~~~~~~avK~~~~~~~~~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~~~-------  104 (174)
                      .++|.+.+.||+|+||.||++.. .+++.||+|.+..........+.+|+.+++.++  |+||+++++.+...       
T Consensus        10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~--h~~iv~~~~~~~~~~~~~~~~   87 (320)
T 2i6l_A           10 GSRYMDLKPLGCGGNGLVFSAVDNDCDKRVAIKKIVLTDPQSVKHALREIKIIRRLD--HDNIVKVFEILGPSGSQLTDD   87 (320)
T ss_dssp             TTTEEEEEECC-----CEEEEEETTTTEEEEEEEEECCSHHHHHHHHHHHHHHHTCC--CTTBCCEEEEECTTSCBCCC-
T ss_pred             CCceeEEEEeccCCCeEEEEEEECCCCeEEEEEEEecCChHHHHHHHHHHHHHHhcC--CCCeeEEEEeccccccccccc
Confidence            36799999999999999999994 458899999998665556678899999999999  99999999887432       


Q ss_pred             -------CCcccchhhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhcc
Q 039630          105 -------PSRILAPLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEI  170 (174)
Q Consensus       105 -------~~~~lv~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  170 (174)
                             +..++++  ++.+ +.+...+                 ....+++..+..++.|++.||+|||++.
T Consensus        88 ~~~~~~~~~~~lv~--e~~~-~~L~~~~-----------------~~~~~~~~~~~~~~~qi~~~l~~lH~~~  140 (320)
T 2i6l_A           88 VGSLTELNSVYIVQ--EYME-TDLANVL-----------------EQGPLLEEHARLFMYQLLRGLKYIHSAN  140 (320)
T ss_dssp             ---CCSCSEEEEEE--ECCS-EEHHHHH-----------------TTCCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             cccccccCceeEEe--eccC-CCHHHHh-----------------hcCCccHHHHHHHHHHHHHHHHHHHhCC
Confidence                   3445555  4444 2333311                 1134788889999999999999999864

>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens}

Probab=99.61  E-value=1.4e-15  Score=112.45  Aligned_cols=127  Identities=13%  Similarity=0.129  Sum_probs=95.5

Q ss_pred             hHHhhcCCeeecceecccCCeeEEEEE------EcCCCEEEEEEeeccCccchhHHHHHHHHHhcccc-cCCCeeeeecc
Q 039630           28 ELKIATNGFRTSNKIGEGGFGSVYKGR------LEDGTVVAVNVLSVESKQGETEFMSEVASMANINI-CHENLVKLHGG  100 (174)
Q Consensus        28 ~~~~~~~~~~~~~~lg~G~~g~V~~~~------~~~~~~~avK~~~~~~~~~~~~~~~e~~~l~~l~~-~h~~i~~~~~~  100 (174)
                      ++....++|.+.+.||+|+||.||+|.      ..+++.||+|+++..   ....+..|+.++..+.. .|+|++.+++.
T Consensus        59 ~~~~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~---~~~~~~~e~~~~~~l~~~~~~~iv~~~~~  135 (365)
T 3e7e_A           59 EFQLGSKLVYVHHLLGEGAFAQVYEATQGDLNDAKNKQKFVLKVQKPA---NPWEFYIGTQLMERLKPSMQHMFMKFYSA  135 (365)
T ss_dssp             EEECSSSEEEEEEEEEECSSEEEEEEEC-------CCCCEEEEEESSC---CHHHHHHHHHHHHHSCGGGGGGBCCEEEE
T ss_pred             eEEECCEEEEEEEEeeccCCEEEEEEEecCCcccccCcEEEEEEeCCC---ChhHHHHHHHHHHHhhhhhhhhhhhhhee
Confidence            444556779999999999999999993      456889999999743   34456677776666531 28999999999


Q ss_pred             eecCCCcccchhhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhcc
Q 039630          101 CIDGPSRILAPLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEI  170 (174)
Q Consensus       101 ~~~~~~~~lv~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  170 (174)
                      +...+..++|+  ++.+++.|...+....           ......+++..++.++.|++.||+|||++.
T Consensus       136 ~~~~~~~~lv~--e~~~~g~L~~~l~~~~-----------~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~  192 (365)
T 3e7e_A          136 HLFQNGSVLVG--ELYSYGTLLNAINLYK-----------NTPEKVMPQGLVISFAMRMLYMIEQVHDCE  192 (365)
T ss_dssp             EECSSCEEEEE--CCCCSCBHHHHHHHHH-----------TSTTCSCCHHHHHHHHHHHHHHHHHHHTTT
T ss_pred             eecCCCcEEEE--eccCCCcHHHHHHHhh-----------cccccCCCHHHHHHHHHHHHHHHHHHhhCC
Confidence            99999999988  7777777665442110           012335899999999999999999999853

>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens}

Probab=99.61  E-value=3.6e-15  Score=106.90  Aligned_cols=119  Identities=20%  Similarity=0.245  Sum_probs=92.0

Q ss_pred             CeeecceecccCCeeEEEEE-EcCCCEEEEEEeeccCccchhHHHHHHHHHhcccccCCCeeeeecceecCCCcccchhh
Q 039630           35 GFRTSNKIGEGGFGSVYKGR-LEDGTVVAVNVLSVESKQGETEFMSEVASMANINICHENLVKLHGGCIDGPSRILAPLQ  113 (174)
Q Consensus        35 ~~~~~~~lg~G~~g~V~~~~-~~~~~~~avK~~~~~~~~~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~~~~~~~lv~~~  113 (174)
                      .+.....||+|+||.||+|. ..++..||+|.++.........+.+|+.+++.++  |+||+++++.+...+..++++  
T Consensus        23 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~--h~~iv~~~~~~~~~~~~~lv~--   98 (295)
T 2clq_A           23 ENGDRVVLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLK--HKNIVQYLGSFSENGFIKIFM--   98 (295)
T ss_dssp             TTSSBCEEEECSSSEEEEEEETTTCCEEEEEEEECCCC---HHHHHHHHHHHTCC--CTTBCCEEEEEEETTEEEEEE--
T ss_pred             CCCCcEEEeecCcEEEEEEEECCCCeEEEEEEccCCchHHHHHHHHHHHHHHhCC--CCCEeeEeeEEEeCCcEEEEE--
Confidence            34445689999999999999 5678899999998665556678999999999999  999999999999888888888  


Q ss_pred             hhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhcc
Q 039630          114 ASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEI  170 (174)
Q Consensus       114 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  170 (174)
                      ++.+++.+...+...             .....+++..+..++.|++.||.|||++.
T Consensus        99 e~~~~~~L~~~l~~~-------------~~~~~~~~~~~~~~~~qi~~~l~~lH~~~  142 (295)
T 2clq_A           99 EQVPGGSLSALLRSK-------------WGPLKDNEQTIGFYTKQILEGLKYLHDNQ  142 (295)
T ss_dssp             ECCSEEEHHHHHHHT-------------TCCCTTCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             EeCCCCCHHHHHHhh-------------ccCCCccHHHHHHHHHHHHHHHHHHHhCC
Confidence            666666655433110             11123568888889999999999999853

>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A*

Probab=99.61  E-value=2e-15  Score=108.42  Aligned_cols=119  Identities=16%  Similarity=0.170  Sum_probs=95.2

Q ss_pred             cCCeeecceecccCCeeEEEEEE-cCCCEEEEEEeeccCc---------cchhHHHHHHHHHhcccccCCCeeeeeccee
Q 039630           33 TNGFRTSNKIGEGGFGSVYKGRL-EDGTVVAVNVLSVESK---------QGETEFMSEVASMANINICHENLVKLHGGCI  102 (174)
Q Consensus        33 ~~~~~~~~~lg~G~~g~V~~~~~-~~~~~~avK~~~~~~~---------~~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~  102 (174)
                      .++|.+.+.||+|+||.||+|.. .+++.||+|+++....         .....+.+|+.++.++. .||||+++++.+.
T Consensus        16 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~-~h~~i~~~~~~~~   94 (298)
T 1phk_A           16 YENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVS-GHPNIIQLKDTYE   94 (298)
T ss_dssp             TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHT-TCTTBCCEEEEEE
T ss_pred             hhccceeeeecCCCceEEEEEEEcCcCceEEEEEEecccccccCHHHHHHHHHHHHHHHHHHHHhc-CCCCEeeeeeeec
Confidence            36799999999999999999994 5688999999975431         12346788999999883 4999999999999


Q ss_pred             cCCCcccchhhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhcc
Q 039630          103 DGPSRILAPLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEI  170 (174)
Q Consensus       103 ~~~~~~lv~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  170 (174)
                      ..+..++++  ++.+++.+...+.                ....+++..+..++.|++.||.|||++.
T Consensus        95 ~~~~~~lv~--e~~~~~~L~~~l~----------------~~~~~~~~~~~~~~~qi~~~l~~lH~~~  144 (298)
T 1phk_A           95 TNTFFFLVF--DLMKKGELFDYLT----------------EKVTLSEKETRKIMRALLEVICALHKLN  144 (298)
T ss_dssp             CSSEEEEEE--ECCTTCBHHHHHH----------------HHSSCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             cCCeEEEEE--eccCCCcHHHHHh----------------ccCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            888888888  7766666655331                1234788999999999999999999863

>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A*

Probab=99.61  E-value=9.7e-16  Score=110.94  Aligned_cols=129  Identities=14%  Similarity=0.208  Sum_probs=98.1

Q ss_pred             eechhhHHhhcCCeeecceecccCCeeEEEEEEcCCCEEEEEEeeccC--ccchhHHHHHHHHHhcccccCCCeeeeecc
Q 039630           23 KISYNELKIATNGFRTSNKIGEGGFGSVYKGRLEDGTVVAVNVLSVES--KQGETEFMSEVASMANINICHENLVKLHGG  100 (174)
Q Consensus        23 ~~~~~~~~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~avK~~~~~~--~~~~~~~~~e~~~l~~l~~~h~~i~~~~~~  100 (174)
                      .+.++.+....++|++.+.||+|+||.||++...++..+|+|++....  ......+.+|+.++..+.-.|+|++++++.
T Consensus        17 ~~~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~   96 (313)
T 3cek_A           17 NLYFQSMSVKGRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDY   96 (313)
T ss_dssp             ---CCEEEETTEEEEEEEEEECCSSEEEEEEECTTCCEEEEEEEECSSCCHHHHHHHHHHHHHHHHHGGGCTTBCCEEEE
T ss_pred             CCCeeeeeeccceEEEEEEecCCCCEEEEEEEcCCCcEEEEEEeccccccccchHHHHHHHHHHHhccccCCceEEEEEE
Confidence            345555556667899999999999999999997778999999997553  234567899999999987124999999999


Q ss_pred             eecCCCcccchhhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhcc
Q 039630          101 CIDGPSRILAPLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEI  170 (174)
Q Consensus       101 ~~~~~~~~lv~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  170 (174)
                      +...+..++++  + ...+.+...+.                ....+++..+..++.|++.||.|||++.
T Consensus        97 ~~~~~~~~lv~--e-~~~~~L~~~l~----------------~~~~~~~~~~~~i~~qi~~aL~~LH~~~  147 (313)
T 3cek_A           97 EITDQYIYMVM--E-CGNIDLNSWLK----------------KKKSIDPWERKSYWKNMLEAVHTIHQHG  147 (313)
T ss_dssp             EECSSEEEEEE--C-CCSEEHHHHHH----------------HCSSCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             eecCCEEEEEE--e-cCCCcHHHHHH----------------hcCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            99988888888  4 33344443221                1224788889999999999999999863

>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ...

Probab=99.61  E-value=1.6e-15  Score=110.55  Aligned_cols=117  Identities=23%  Similarity=0.409  Sum_probs=86.4

Q ss_pred             CCeeecceecccCCeeEEEEEE-cCCC----EEEEEEeecc-CccchhHHHHHHHHHhcccccCCCeeeeecceecCCCc
Q 039630           34 NGFRTSNKIGEGGFGSVYKGRL-EDGT----VVAVNVLSVE-SKQGETEFMSEVASMANINICHENLVKLHGGCIDGPSR  107 (174)
Q Consensus        34 ~~~~~~~~lg~G~~g~V~~~~~-~~~~----~~avK~~~~~-~~~~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~~~~~~  107 (174)
                      ++|+..+.||+|+||.||+|.. .++.    .+|+|.++.. .......+.+|+.++..++  |+||+++++++.... .
T Consensus        15 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~--h~~iv~~~~~~~~~~-~   91 (327)
T 3poz_A           15 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD--NPHVCRLLGICLTST-V   91 (327)
T ss_dssp             GGEEEEEEEEEETTEEEEEEEECC----CCEEEEEEEC-------CHHHHHHHHHHHHHCC--BTTBCCEEEEEESSS-E
T ss_pred             HHcccceEEeeCCCeEEEEEEEcCCCceEEEEEEEeecccccCHHHHHHHHHHHHHHHhCC--CCCEeEEEEEEecCC-e
Confidence            5689999999999999999983 3444    4588877544 2345677999999999999  999999999998754 5


Q ss_pred             ccchhhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhcc
Q 039630          108 ILAPLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEI  170 (174)
Q Consensus       108 ~lv~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  170 (174)
                      ++++  ++...+.+...+..               ....+++..++.++.|++.||.|||++.
T Consensus        92 ~~v~--e~~~~g~L~~~l~~---------------~~~~~~~~~~~~~~~qi~~~l~~LH~~~  137 (327)
T 3poz_A           92 QLIT--QLMPFGCLLDYVRE---------------HKDNIGSQYLLNWCVQIAKGMNYLEDRR  137 (327)
T ss_dssp             EEEE--ECCTTCBHHHHHHH---------------STTSCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             EEEE--EecCCCcHHHHHHh---------------cCCCCCHHHHHHHHHHHHHHHHHHhhCC
Confidence            5555  66666666554321               1234788999999999999999999863

>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens}

Probab=99.61  E-value=5.2e-16  Score=113.61  Aligned_cols=116  Identities=17%  Similarity=0.212  Sum_probs=93.0

Q ss_pred             CCeeecceecccCCeeEEEEE-EcCCCEEEEEEeeccCc--------cchhHHHHHHHHHhcccccCCCeeeeecceecC
Q 039630           34 NGFRTSNKIGEGGFGSVYKGR-LEDGTVVAVNVLSVESK--------QGETEFMSEVASMANINICHENLVKLHGGCIDG  104 (174)
Q Consensus        34 ~~~~~~~~lg~G~~g~V~~~~-~~~~~~~avK~~~~~~~--------~~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~~~  104 (174)
                      ++|++.+.||+|+||.||++. ..++..||+|+++....        .....+.+|+.+++.++  |+||+++++++...
T Consensus        24 ~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~--h~~Iv~~~~~~~~~  101 (335)
T 3dls_A           24 QKYSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILSRVE--HANIIKVLDIFENQ  101 (335)
T ss_dssp             HHEEEEEECSSSSSCSEEEEEETTTTEEEEEEEEESTTSCTTSEEEETTTEEEEHHHHHHTTCC--CTTBCCEEEEEECS
T ss_pred             cceEEEeEEEecCCEEEEEEEECCCCcEEEEEEEehhhcccccccchHHHHHHHHHHHHHHhCC--CCCEeeEEEEEeeC
Confidence            579999999999999999998 56788999999975521        13345778999999999  99999999999998


Q ss_pred             CCcccchhhhhhhhh-hhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhc
Q 039630          105 PSRILAPLQASIEAL-FLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEE  169 (174)
Q Consensus       105 ~~~~lv~~~~~~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~  169 (174)
                      +..++++  ++...+ .+...+                .....+++..+..++.|++.||.|||++
T Consensus       102 ~~~~lv~--e~~~~g~~l~~~~----------------~~~~~l~~~~~~~i~~qi~~~L~~LH~~  149 (335)
T 3dls_A          102 GFFQLVM--EKHGSGLDLFAFI----------------DRHPRLDEPLASYIFRQLVSAVGYLRLK  149 (335)
T ss_dssp             SEEEEEE--ECCTTSCBHHHHH----------------HTCCCCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             CEEEEEE--EeCCCCccHHHHH----------------HhcCCCCHHHHHHHHHHHHHHHHHHHhC
Confidence            8888888  554444 443322                1223478999999999999999999976

>2r3i_A Cell division protein kinase 2; serine/threonine-protein kinase, cell cycle, inhibition, cyclin-dependent kinase, cancer, ATP-binding; HET: SCF; 1.28A {Homo sapiens} PDB: 2r3j_A* 2r3k_A* 2r3l_A* 2r3m_A* 2r3n_A* 2r3o_A* 2r3p_A* 2r3q_A* 1jvp_P* 1buh_A 1ckp_A* 1di8_A* 1dm2_A* 1f5q_A 1fin_A* 1fq1_B* 1fvt_A* 1fvv_A* 1g5s_A* 1gih_A* ...

Probab=99.61  E-value=3.3e-15  Score=107.36  Aligned_cols=118  Identities=24%  Similarity=0.319  Sum_probs=90.2

Q ss_pred             CCeeecceecccCCeeEEEEEE-cCCCEEEEEEeeccC--ccchhHHHHHHHHHhcccccCCCeeeeecceecCCCcccc
Q 039630           34 NGFRTSNKIGEGGFGSVYKGRL-EDGTVVAVNVLSVES--KQGETEFMSEVASMANINICHENLVKLHGGCIDGPSRILA  110 (174)
Q Consensus        34 ~~~~~~~~lg~G~~g~V~~~~~-~~~~~~avK~~~~~~--~~~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~~~~~~~lv  110 (174)
                      ++|+..+.||+|+||.||++.. .+++.||+|+++...  ......+.+|+.+++.++  |+||+++++.+...+..+++
T Consensus         3 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~--h~~i~~~~~~~~~~~~~~lv   80 (299)
T 2r3i_A            3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN--HPNIVKLLDVIHTENKLYLV   80 (299)
T ss_dssp             TTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEC--------CCHHHHHHHHHHTTCC--CTTBCCEEEEEEETTEEEEE
T ss_pred             chhhhhhhhccCCCeeEEEEEEcCCCceEEEEEeecCccchhhHHHHHHHHHHHHHcC--CCCeeeEEEEEecCCceEEE
Confidence            5789999999999999999994 478999999997542  233567889999999999  99999999999998888888


Q ss_pred             hhhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhcc
Q 039630          111 PLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEI  170 (174)
Q Consensus       111 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  170 (174)
                      +  ++... .+...+..              .....+++..+..++.|++.||.|||++.
T Consensus        81 ~--e~~~~-~L~~~~~~--------------~~~~~~~~~~~~~~~~~i~~~l~~lH~~~  123 (299)
T 2r3i_A           81 F--EFLHQ-DLKKFMDA--------------SALTGIPLPLIKSYLFQLLQGLAFCHSHR  123 (299)
T ss_dssp             E--ECCSE-EHHHHHHH--------------TTTTCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             E--EcccC-CHHHHHHh--------------hhccCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            8  55442 33332211              11124788889999999999999999864

>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A*

Probab=99.61  E-value=2.4e-15  Score=112.28  Aligned_cols=118  Identities=15%  Similarity=0.192  Sum_probs=92.6

Q ss_pred             CCeeecceecccCCeeEEEEEEcCCCEEEEEEeeccC--ccchhHHHHHHHHHhcccccCCCeeeeecceecCCCcccch
Q 039630           34 NGFRTSNKIGEGGFGSVYKGRLEDGTVVAVNVLSVES--KQGETEFMSEVASMANINICHENLVKLHGGCIDGPSRILAP  111 (174)
Q Consensus        34 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~avK~~~~~~--~~~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~~~~~~~lv~  111 (174)
                      ..|.+.+.||+|+||.||++....+..||+|++....  ......+.+|+.++..+.-.|+||+++++++...+..++++
T Consensus        56 ~~y~~~~~LG~G~fg~Vy~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~~~~~~iv~~~~~~~~~~~~~lv~  135 (390)
T 2zmd_A           56 RIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVM  135 (390)
T ss_dssp             EEEEEEEEEECCSSEEEEEEECTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEE
T ss_pred             CceEEEEEEccCCCeEEEEEEcCCCCEEEEEEEecccccHHHHHHHHHHHHHHHHcccCCCeEEEEEEEEecCCEEEEEE
Confidence            4599999999999999999997678999999997553  23456789999999998612599999999999988888888


Q ss_pred             hhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhcc
Q 039630          112 LQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEI  170 (174)
Q Consensus       112 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  170 (174)
                        + ...+.|...+.                ....+++..+..++.||+.||.|||++.
T Consensus       136 --E-~~~~~L~~~l~----------------~~~~~~~~~~~~i~~qi~~aL~~lH~~~  175 (390)
T 2zmd_A          136 --E-CGNIDLNSWLK----------------KKKSIDPWERKSYWKNMLEAVHTIHQHG  175 (390)
T ss_dssp             --E-CCSEEHHHHHH----------------HCSSCCHHHHHHHHHHHHHHHHHHHTTT
T ss_pred             --e-cCCCCHHHHHH----------------hcCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence              4 23344433221                1124678888999999999999999864

>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens}

Probab=99.61  E-value=2.3e-15  Score=108.87  Aligned_cols=118  Identities=24%  Similarity=0.311  Sum_probs=90.7

Q ss_pred             hcCCeeecceecccCCeeEEEEEE-cCCCEEEEEEeeccCccchhHHHHHHHHHhcccccCCCeeeeecceecCCCcccc
Q 039630           32 ATNGFRTSNKIGEGGFGSVYKGRL-EDGTVVAVNVLSVESKQGETEFMSEVASMANINICHENLVKLHGGCIDGPSRILA  110 (174)
Q Consensus        32 ~~~~~~~~~~lg~G~~g~V~~~~~-~~~~~~avK~~~~~~~~~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~~~~~~~lv  110 (174)
                      ..+.|.+.+.||+|+||.||++.. .++..||+|.++..  .....+.+|+.++..++  |+||+++++.+...+..+++
T Consensus        27 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~--~~~~~~~~e~~~l~~l~--h~~i~~~~~~~~~~~~~~lv  102 (314)
T 3com_A           27 PEEVFDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVE--SDLQEIIKEISIMQQCD--SPHVVKYYGSYFKNTDLWIV  102 (314)
T ss_dssp             ---CEEEEEECC----CEEEEEEETTTCCEEEEEEEETT--SCCHHHHHHHHHHHTCC--CTTBCCEEEEEEETTEEEEE
T ss_pred             chhhhhhheeeccCCCeEEEEEEECCCCCEEEEEecCch--HHHHHHHHHHHHHHhCC--CCCCccEEEEEEeCCEEEEE
Confidence            446799999999999999999984 46899999999754  23567889999999999  99999999999988888888


Q ss_pred             hhhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhcc
Q 039630          111 PLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEI  170 (174)
Q Consensus       111 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  170 (174)
                      +  ++.+++.+...+.               .....+++..+..++.|++.||.|||++.
T Consensus       103 ~--e~~~~~~L~~~~~---------------~~~~~~~~~~~~~i~~~i~~~l~~lH~~~  145 (314)
T 3com_A          103 M--EYCGAGSVSDIIR---------------LRNKTLTEDEIATILQSTLKGLEYLHFMR  145 (314)
T ss_dssp             E--ECCTTEEHHHHHH---------------HHTCCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             e--ecCCCCCHHHHHH---------------hcCCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            8  6666666554321               11234788999999999999999999863

>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7

Probab=99.61  E-value=4.4e-15  Score=106.59  Aligned_cols=117  Identities=23%  Similarity=0.276  Sum_probs=89.8

Q ss_pred             CeeecceecccCCeeEEEEEE-cCCC---EEEEEEeeccC-ccchhHHHHHHHHHhcccccCCCeeeeecceecCCCc-c
Q 039630           35 GFRTSNKIGEGGFGSVYKGRL-EDGT---VVAVNVLSVES-KQGETEFMSEVASMANINICHENLVKLHGGCIDGPSR-I  108 (174)
Q Consensus        35 ~~~~~~~lg~G~~g~V~~~~~-~~~~---~~avK~~~~~~-~~~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~~~~~~-~  108 (174)
                      .|...+.||+|+||.||+|.. .++.   .+|+|.++... ....+.+.+|+.+++.++  |+||+++++++...+.. +
T Consensus        22 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~--h~~iv~~~~~~~~~~~~~~   99 (298)
T 3pls_A           22 VTHSDRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLN--HPNVLALIGIMLPPEGLPH   99 (298)
T ss_dssp             EEEEEEEEEEETTEEEEEEEEECSSSCEEEEEEEEETTCCSHHHHHHHHHHHHHHHTCC--CTTBCCCCEEECCSSSCCE
T ss_pred             EEccCceeccCCCceEEEEEEecCCCceeeeeeeeccccccHHHHHHHHHHHHHHHhCC--CCCeeeEEEEEecCCCCcE
Confidence            466679999999999999983 3333   79999987542 234567889999999999  99999999999876654 6


Q ss_pred             cchhhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhcc
Q 039630          109 LAPLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEI  170 (174)
Q Consensus       109 lv~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  170 (174)
                      +++  ++..++.+...+.               .....+++..+..++.|++.||.|||++.
T Consensus       100 ~v~--e~~~~~~L~~~~~---------------~~~~~~~~~~~~~i~~qi~~~l~~LH~~~  144 (298)
T 3pls_A          100 VLL--PYMCHGDLLQFIR---------------SPQRNPTVKDLISFGLQVARGMEYLAEQK  144 (298)
T ss_dssp             EEE--CCCTTCBHHHHHH---------------CTTCCCBHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             EEE--ecccCCCHHHHHh---------------ccccCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            666  6666666655331               12234688889999999999999999864

>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7

Probab=99.61  E-value=1e-15  Score=113.40  Aligned_cols=116  Identities=19%  Similarity=0.206  Sum_probs=83.1

Q ss_pred             cCCeeecceecccCCeeEEEEE-EcCCCEEEEEEeeccC--ccchhHHHHHHHHHhcccccCCCeeeeecceecCCC---
Q 039630           33 TNGFRTSNKIGEGGFGSVYKGR-LEDGTVVAVNVLSVES--KQGETEFMSEVASMANINICHENLVKLHGGCIDGPS---  106 (174)
Q Consensus        33 ~~~~~~~~~lg~G~~g~V~~~~-~~~~~~~avK~~~~~~--~~~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~~~~~---  106 (174)
                      .+.|...+.||+|+||.||+|. ..+|..||+|.+....  ......+.+|+.+++.++  |+||+++++++...+.   
T Consensus        24 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~--hpnIv~l~~~~~~~~~~~~  101 (367)
T 1cm8_A           24 RAVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMR--HENVIGLLDVFTPDETLDD  101 (367)
T ss_dssp             BSSEEEEEEC------CEEEEEETTTCCEEEEEECSSTTSSHHHHHHHHHHHHHHHHCC--BTTBCCCSEEECSCSSTTT
T ss_pred             cceEEEeEEeeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCC--CcCCCCceeeEecCCcccc
Confidence            4679999999999999999998 4678999999996442  233567889999999999  9999999999876633   


Q ss_pred             ---cccchhhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhcc
Q 039630          107 ---RILAPLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEI  170 (174)
Q Consensus       107 ---~~lv~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  170 (174)
                         .++++  ++. +..+...+                 ....+++..+..++.|++.||.|||++.
T Consensus       102 ~~~~~lv~--e~~-~~~L~~~~-----------------~~~~l~~~~~~~~~~qi~~~L~~LH~~~  148 (367)
T 1cm8_A          102 FTDFYLVM--PFM-GTDLGKLM-----------------KHEKLGEDRIQFLVYQMLKGLRYIHAAG  148 (367)
T ss_dssp             CCCCEEEE--ECC-SEEHHHHH-----------------HHCCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             CceEEEEE--ecC-CCCHHHHH-----------------hcCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence               36666  433 22232211                 1124788899999999999999999863

>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A*

Probab=99.61  E-value=2.8e-15  Score=110.18  Aligned_cols=117  Identities=28%  Similarity=0.363  Sum_probs=89.1

Q ss_pred             CCeeecceecccCCeeEEEEEE-cCCCEEEEEEeeccC--ccchhHHHHHHHHHhcccccCCCeeeeecceecCC-----
Q 039630           34 NGFRTSNKIGEGGFGSVYKGRL-EDGTVVAVNVLSVES--KQGETEFMSEVASMANINICHENLVKLHGGCIDGP-----  105 (174)
Q Consensus        34 ~~~~~~~~lg~G~~g~V~~~~~-~~~~~~avK~~~~~~--~~~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~~~~-----  105 (174)
                      ++|++.+.||+|+||.||++.. .+++.||+|++....  ......+.+|+.+++.++  |+||+++++.+....     
T Consensus        17 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~--h~~iv~~~~~~~~~~~~~~~   94 (351)
T 3mi9_A           17 SKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLK--HENVVNLIEICRTKASPYNR   94 (351)
T ss_dssp             GGEEEEEECSSCSTTSEEEEEETTTCCEEEEEECCCSSCSSSSCHHHHHHHHHHHHCC--CTTBCCEEEEEEEC------
T ss_pred             cceeEEEEEecCCCcEEEEEEECCCCCEEEEEEEecccccccchHHHHHHHHHHHhcc--CCCcccHhheeecccccccc
Confidence            5799999999999999999994 678999999996553  223456789999999999  999999999997753     


Q ss_pred             ---CcccchhhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhcc
Q 039630          106 ---SRILAPLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEI  170 (174)
Q Consensus       106 ---~~~lv~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  170 (174)
                         ..++|+  ++.++ .+...+               ......+++..+..++.|++.||+|||++.
T Consensus        95 ~~~~~~lv~--e~~~~-~l~~~l---------------~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~  144 (351)
T 3mi9_A           95 CKGSIYLVF--DFCEH-DLAGLL---------------SNVLVKFTLSEIKRVMQMLLNGLYYIHRNK  144 (351)
T ss_dssp             --CEEEEEE--ECCSE-EHHHHH---------------HCTTSCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             CCceEEEEE--eccCC-CHHHHH---------------hhccCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence               345666  44443 222211               111234789999999999999999999863

>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A*

Probab=99.61  E-value=2.8e-15  Score=114.22  Aligned_cols=115  Identities=17%  Similarity=0.194  Sum_probs=89.6

Q ss_pred             cCCeeecceecccCCeeEEEEE-EcCCCEEEEEEeecc--CccchhHHHHHHHHHhcccccCCCeeeeecceecCCC---
Q 039630           33 TNGFRTSNKIGEGGFGSVYKGR-LEDGTVVAVNVLSVE--SKQGETEFMSEVASMANINICHENLVKLHGGCIDGPS---  106 (174)
Q Consensus        33 ~~~~~~~~~lg~G~~g~V~~~~-~~~~~~~avK~~~~~--~~~~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~~~~~---  106 (174)
                      .++|++++.||+|+||.||++. ..+++.||+|++...  .......+.+|+.+++.++  |+||+++++++.....   
T Consensus        61 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~--hpnIv~l~~~~~~~~~~~~  138 (464)
T 3ttj_A           61 LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVN--HKNIISLLNVFTPQKTLEE  138 (464)
T ss_dssp             ETTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEESGGGSHHHHHHHHHHHHHHHHCC--CTTBCCCSEEECSCCSTTT
T ss_pred             cCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEECccccChHHHHHHHHHHHHHHhCC--CCCCCcEEEEEccCCcccc
Confidence            4679999999999999999998 567889999999754  2334567889999999999  9999999999976543   


Q ss_pred             ---cccchhhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhcc
Q 039630          107 ---RILAPLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEI  170 (174)
Q Consensus       107 ---~~lv~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  170 (174)
                         .++|+  ++.++... ..+                  ...+++..+..++.|++.||+|||++.
T Consensus       139 ~~~~~lv~--E~~~~~l~-~~~------------------~~~l~~~~~~~~~~qil~aL~~lH~~~  184 (464)
T 3ttj_A          139 FQDVYLVM--ELMDANLC-QVI------------------QMELDHERMSYLLYQMLCGIKHLHSAG  184 (464)
T ss_dssp             CCEEEEEE--ECCSEEHH-HHH------------------TSCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             CCeEEEEE--eCCCCCHH-HHH------------------hhcCCHHHHHHHHHHHHHHHHHHHHCC
Confidence               36666  55443321 111                  013788889999999999999999864

>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens}

Probab=99.60  E-value=1.6e-15  Score=110.48  Aligned_cols=130  Identities=19%  Similarity=0.257  Sum_probs=94.5

Q ss_pred             echhhHHhhcCCeeecceecccCCeeEEEEE-EcCCCEEEEEEeeccCccchhHHHHHHHHHhcccccCCCeeeeeccee
Q 039630           24 ISYNELKIATNGFRTSNKIGEGGFGSVYKGR-LEDGTVVAVNVLSVESKQGETEFMSEVASMANINICHENLVKLHGGCI  102 (174)
Q Consensus        24 ~~~~~~~~~~~~~~~~~~lg~G~~g~V~~~~-~~~~~~~avK~~~~~~~~~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~  102 (174)
                      +..+.+.....+|++.+.||+|+||.||++. ..++..||+|.+..........+.+|+.++..+. .|+||+++++++.
T Consensus        18 ~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~-~h~~iv~~~~~~~   96 (337)
T 3ll6_A           18 FVGQTVELGELRLRVRRVLAEGGFAFVYEAQDVGSGREYALKRLLSNEEEKNRAIIQEVCFMKKLS-GHPNIVQFCSAAS   96 (337)
T ss_dssp             STTCEEEETTEEEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEESSHHHHHHHHHHHHHHHHHT-TSTTBCCEEEEEE
T ss_pred             hhcceeeccCceEEEEEEEccCCceEEEEEEECCCCcEEEEEEecCCchHHHHHHHHHHHHHHHhc-cCCChhhcccccc
Confidence            3334444555679999999999999999999 4578999999997665555667899999999984 4999999999984


Q ss_pred             cC--------CCcccchhhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhcc
Q 039630          103 DG--------PSRILAPLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEI  170 (174)
Q Consensus       103 ~~--------~~~~lv~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  170 (174)
                      ..        ...++++  ++.. +.+...+..             ......+++..++.++.|++.||.|||++.
T Consensus        97 ~~~~~~~~~~~~~~lv~--e~~~-g~L~~~l~~-------------~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~  156 (337)
T 3ll6_A           97 IGKEESDTGQAEFLLLT--ELCK-GQLVEFLKK-------------MESRGPLSCDTVLKIFYQTCRAVQHMHRQK  156 (337)
T ss_dssp             ECTTTSTTSSEEEEEEE--ECCS-EEHHHHHHH-------------HHTTCSCCHHHHHHHHHHHHHHHHHHHTSS
T ss_pred             ccccccccCCceEEEEE--EecC-CCHHHHHHH-------------hhccCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            32        2245555  4333 233222210             011235889999999999999999999875

>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A

Probab=99.60  E-value=2.3e-15  Score=107.82  Aligned_cols=118  Identities=23%  Similarity=0.268  Sum_probs=91.9

Q ss_pred             cCCeeecceecccCCeeEEEEE-EcCCCEEEEEEeecc--CccchhHHHHHHHHHhcccccCCCeeeeecceecC----C
Q 039630           33 TNGFRTSNKIGEGGFGSVYKGR-LEDGTVVAVNVLSVE--SKQGETEFMSEVASMANINICHENLVKLHGGCIDG----P  105 (174)
Q Consensus        33 ~~~~~~~~~lg~G~~g~V~~~~-~~~~~~~avK~~~~~--~~~~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~~~----~  105 (174)
                      ...|.+.+.||+|+||.||+|. ..++..+|+|.+...  .......+.+|+.+++.++  ||||+++++.+...    .
T Consensus        25 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~va~k~~~~~~~~~~~~~~~~~e~~~l~~l~--h~~iv~~~~~~~~~~~~~~  102 (290)
T 1t4h_A           25 GRFLKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQ--HPNIVRFYDSWESTVKGKK  102 (290)
T ss_dssp             SCEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHTTCC--CTTBCCEEEEEEEESSSCE
T ss_pred             ceeEEeeeeccCCCCeEEEEeEecCCceEEEEEEecchhhCHHHHHHHHHHHHHHHhCC--CCCeeeeeeeeccccCCCc
Confidence            3458888999999999999998 456889999999754  2334567899999999999  99999999987652    3


Q ss_pred             CcccchhhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhcc
Q 039630          106 SRILAPLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEI  170 (174)
Q Consensus       106 ~~~lv~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  170 (174)
                      ..++++  ++.+++.+...+.                ....+++..+..++.|++.||.|||++.
T Consensus       103 ~~~lv~--e~~~~~~L~~~l~----------------~~~~~~~~~~~~~~~qi~~~l~~lH~~~  149 (290)
T 1t4h_A          103 CIVLVT--ELMTSGTLKTYLK----------------RFKVMKIKVLRSWCRQILKGLQFLHTRT  149 (290)
T ss_dssp             EEEEEE--ECCCSCBHHHHHH----------------HHSSCCHHHHHHHHHHHHHHHHHHHTSS
T ss_pred             eEEEEE--EecCCCCHHHHHH----------------HccCCCHHHHHHHHHHHHHHHHHHHcCC
Confidence            355666  6666666554331                1134788899999999999999999976

>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A*

Probab=99.60  E-value=3.9e-15  Score=108.41  Aligned_cols=132  Identities=24%  Similarity=0.344  Sum_probs=93.6

Q ss_pred             CCeeecceecccCCeeEEEEE-EcCCCE--EEEEEeecc-CccchhHHHHHHHHHhcc-cccCCCeeeeecceecCCCcc
Q 039630           34 NGFRTSNKIGEGGFGSVYKGR-LEDGTV--VAVNVLSVE-SKQGETEFMSEVASMANI-NICHENLVKLHGGCIDGPSRI  108 (174)
Q Consensus        34 ~~~~~~~~lg~G~~g~V~~~~-~~~~~~--~avK~~~~~-~~~~~~~~~~e~~~l~~l-~~~h~~i~~~~~~~~~~~~~~  108 (174)
                      ++|.+.+.||+|+||.||++. ..++..  +++|.++.. .......+.+|+.++..+ +  ||||+++++.+...+..+
T Consensus        25 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~~--hp~iv~~~~~~~~~~~~~  102 (327)
T 1fvr_A           25 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGH--HPNIINLLGACEHRGYLY  102 (327)
T ss_dssp             GGCEEEEEEECGGGCEEEEEEEEETTEEEEEEEEEEECC------CHHHHHHHHHTTCCC--CTTBCCEEEEEEETTEEE
T ss_pred             HHccceeeeecCCCceEEEEEEccCCcccceeeeeeccccchHHHHHHHHHHHHHHhccC--CCchhhhceeeeeCCceE
Confidence            468889999999999999999 455654  499998754 234456789999999999 7  999999999999998888


Q ss_pred             cchhhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhc
Q 039630          109 LAPLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEE  169 (174)
Q Consensus       109 lv~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~  169 (174)
                      +++  ++.+++.|...+.....................+++..++.++.|++.||.|||++
T Consensus       103 lv~--e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~  161 (327)
T 1fvr_A          103 LAI--EYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQK  161 (327)
T ss_dssp             EEE--CCCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             EEE--ecCCCCCHHHHHHhcccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhC
Confidence            888  77766666554322110000000000001123578999999999999999999985

>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens}

Probab=99.60  E-value=5.1e-15  Score=106.64  Aligned_cols=118  Identities=18%  Similarity=0.229  Sum_probs=89.9

Q ss_pred             CCeeecceecccCCeeEEEEE-EcCCCEEEEEEeeccC----ccchhHHHHHHHHHhcccccCCCeeeeecceec--CCC
Q 039630           34 NGFRTSNKIGEGGFGSVYKGR-LEDGTVVAVNVLSVES----KQGETEFMSEVASMANINICHENLVKLHGGCID--GPS  106 (174)
Q Consensus        34 ~~~~~~~~lg~G~~g~V~~~~-~~~~~~~avK~~~~~~----~~~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~~--~~~  106 (174)
                      ++|.+.+.||+|+||.||++. ..++..+|+|+++...    ......+.+|+.+++.++  |+||+++++.+..  ...
T Consensus         5 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~~l~~l~--h~~i~~~~~~~~~~~~~~   82 (305)
T 2wtk_C            5 GKYLMGDLLGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLR--HKNVIQLVDVLYNEEKQK   82 (305)
T ss_dssp             CCBCCCCEEEECSSCEEEEEEBTTTCCEEEEEEECHHHHHHSTTHHHHHHHHHHHHTTCC--CTTBCCEEEEEECC---C
T ss_pred             cceeEeeEEecCCCeEEEEEEECCCCcEEEEEEeccccccccchhHHHHHHHHHHHHhcC--CCCeeEEEEEEEcCCCCe
Confidence            579999999999999999999 4578899999997542    234567899999999999  9999999999843  445


Q ss_pred             cccchhhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhcc
Q 039630          107 RILAPLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEI  170 (174)
Q Consensus       107 ~~lv~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  170 (174)
                      .++++  ++.+.+ +...+.              ......+++..+..++.|++.||.|||++.
T Consensus        83 ~~lv~--e~~~~~-l~~~~~--------------~~~~~~~~~~~~~~~~~qi~~al~~LH~~~  129 (305)
T 2wtk_C           83 MYMVM--EYCVCG-MQEMLD--------------SVPEKRFPVCQAHGYFCQLIDGLEYLHSQG  129 (305)
T ss_dssp             EEEEE--ECCSEE-HHHHHH--------------HSTTCSCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             EEEEe--hhccCC-HHHHHH--------------hCcccccCHHHHHHHHHHHHHHHHHHHHCC
Confidence            67777  555544 211110              011235788999999999999999999863

>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ...

Probab=99.59  E-value=7.2e-15  Score=107.00  Aligned_cols=112  Identities=16%  Similarity=0.232  Sum_probs=89.8

Q ss_pred             CCeeecceecccCCeeEEEEE-EcCCCEEEEEEeeccCccchhHHHHHHHHHhcccccCCCeeeeecceec--CCCcccc
Q 039630           34 NGFRTSNKIGEGGFGSVYKGR-LEDGTVVAVNVLSVESKQGETEFMSEVASMANINICHENLVKLHGGCID--GPSRILA  110 (174)
Q Consensus        34 ~~~~~~~~lg~G~~g~V~~~~-~~~~~~~avK~~~~~~~~~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~~--~~~~~lv  110 (174)
                      ++|++.+.||+|+||.||+|. ..++..||+|+++.   .....+.+|+.++..+. .|+||+++++.+..  ....+++
T Consensus        36 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~---~~~~~~~~E~~~l~~l~-~~~~i~~~~~~~~~~~~~~~~lv  111 (330)
T 3nsz_A           36 DDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKP---VKKKKIKREIKILENLR-GGPNIITLADIVKDPVSRTPALV  111 (330)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECS---CCHHHHHHHHHHHHHHT-TSTTBCCEEEEEECTTTCCEEEE
T ss_pred             CceEEEEEecccCCeEEEEEEECCCCcEEEEEEecc---cchHHHHHHHHHHHHcC-CCCCEEEeeeeeccCCCCceEEE
Confidence            569999999999999999998 56789999999973   34567899999999985 59999999999987  3445566


Q ss_pred             hhhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhcc
Q 039630          111 PLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEI  170 (174)
Q Consensus       111 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  170 (174)
                      +  ++..++.+...+                   ..+++..+..++.|++.||+|||++.
T Consensus       112 ~--e~~~~~~l~~~~-------------------~~~~~~~~~~~~~qi~~~l~~lH~~~  150 (330)
T 3nsz_A          112 F--EHVNNTDFKQLY-------------------QTLTDYDIRFYMYEILKALDYCHSMG  150 (330)
T ss_dssp             E--ECCCCCCHHHHG-------------------GGCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             E--eccCchhHHHHH-------------------HhCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            5  665555544321                   13688889999999999999999863

>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A*

Probab=99.59  E-value=2e-15  Score=109.95  Aligned_cols=117  Identities=24%  Similarity=0.390  Sum_probs=89.3

Q ss_pred             CCeeecceecccCCeeEEEEE-EcCCCE----EEEEEeeccC-ccchhHHHHHHHHHhcccccCCCeeeeecceecCCCc
Q 039630           34 NGFRTSNKIGEGGFGSVYKGR-LEDGTV----VAVNVLSVES-KQGETEFMSEVASMANINICHENLVKLHGGCIDGPSR  107 (174)
Q Consensus        34 ~~~~~~~~lg~G~~g~V~~~~-~~~~~~----~avK~~~~~~-~~~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~~~~~~  107 (174)
                      ++|++.+.||+|+||.||+|. ..++..    +++|.+.... ......+.+|+.++..++  |+||+++++++. .+..
T Consensus        13 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~~K~~~~~~~~~~~~~~~~e~~~l~~l~--h~~iv~~~~~~~-~~~~   89 (325)
T 3kex_A           13 TELRKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLD--HAHIVRLLGLCP-GSSL   89 (325)
T ss_dssp             TTEEEEEEEECCSSCEEEEEEECCTTCSCCEEEEEEEECCTTSCSCBCSCCHHHHHHHTCC--CTTBCCEEEEEC-BSSE
T ss_pred             hHceeeeeeeecCCceEEEEEEcCCCceEEEEEEEEeccccccHHHHHHHHHHHHHHhcCC--CCCcCeEEEEEc-CCcc
Confidence            579999999999999999998 444543    7888775442 334456788999999999  999999999886 4556


Q ss_pred             ccchhhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhcc
Q 039630          108 ILAPLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEI  170 (174)
Q Consensus       108 ~lv~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  170 (174)
                      ++++  ++..++.+...+.               .....+++..+..++.|++.||.|||++.
T Consensus        90 ~~v~--e~~~~~~L~~~l~---------------~~~~~~~~~~~~~~~~qi~~~l~~lH~~~  135 (325)
T 3kex_A           90 QLVT--QYLPLGSLLDHVR---------------QHRGALGPQLLLNWGVQIAKGMYYLEEHG  135 (325)
T ss_dssp             EEEE--ECCTTCBSHHHHH---------------SSGGGSCTTHHHHHHHHHHHHHHHHHHTT
T ss_pred             EEEE--EeCCCCCHHHHHH---------------HccccCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            6666  6666666655431               12235788888999999999999999864

>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ...

Probab=99.59  E-value=3.2e-15  Score=107.39  Aligned_cols=118  Identities=23%  Similarity=0.294  Sum_probs=89.9

Q ss_pred             CCeeecceecccCCeeEEEEEEcC----CCEEEEEEeecc-CccchhHHHHHHHHHhcccccCCCeeeeecceec-CCCc
Q 039630           34 NGFRTSNKIGEGGFGSVYKGRLED----GTVVAVNVLSVE-SKQGETEFMSEVASMANINICHENLVKLHGGCID-GPSR  107 (174)
Q Consensus        34 ~~~~~~~~lg~G~~g~V~~~~~~~----~~~~avK~~~~~-~~~~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~~-~~~~  107 (174)
                      ..|.+.+.||+|+||.||+|....    ...+++|.++.. .......+.+|+.+++.++  |+||+++++.+.. .+..
T Consensus        25 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~E~~~l~~l~--h~~iv~~~~~~~~~~~~~  102 (298)
T 3f66_A           25 LIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFS--HPNVLSLLGICLRSEGSP  102 (298)
T ss_dssp             EEEEEEEEEEEETTEEEEEEEEC-----CEEEEEEEETTCCSHHHHHHHHHHHHHHHTCC--CTTBCCCCEEECCSSSCC
T ss_pred             eehhhcceeeecCCceEEEEEEecCCCceeEEEEEecccCCCHHHHHHHHHHHHHHHhCC--CCCEeeeeeEEEcCCCce
Confidence            468899999999999999998422    236899998754 2334567899999999999  9999999998654 4556


Q ss_pred             ccchhhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhcc
Q 039630          108 ILAPLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEI  170 (174)
Q Consensus       108 ~lv~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  170 (174)
                      ++++  ++.+++.+...+.               .....+++..+..++.|++.||.|||++.
T Consensus       103 ~~v~--e~~~~~~L~~~l~---------------~~~~~~~~~~~~~i~~ql~~~l~~lH~~~  148 (298)
T 3f66_A          103 LVVL--PYMKHGDLRNFIR---------------NETHNPTVKDLIGFGLQVAKGMKYLASKK  148 (298)
T ss_dssp             EEEE--ECCTTCBHHHHHH---------------CTTCCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             EEEE--eCCCCCCHHHHHH---------------hcccCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            6676  6666666655331               12234688889999999999999999864

>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A

Probab=99.59  E-value=1.8e-15  Score=108.69  Aligned_cols=117  Identities=21%  Similarity=0.313  Sum_probs=89.1

Q ss_pred             CCeeecceecccCCeeEEEEE-EcCCCEEEEEEeeccCccchhHHHHHHHHHhcccccCCCeeeeecceecC--------
Q 039630           34 NGFRTSNKIGEGGFGSVYKGR-LEDGTVVAVNVLSVESKQGETEFMSEVASMANINICHENLVKLHGGCIDG--------  104 (174)
Q Consensus        34 ~~~~~~~~lg~G~~g~V~~~~-~~~~~~~avK~~~~~~~~~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~~~--------  104 (174)
                      ++|+..+.||+|+||.||++. ..++..+|+|+++.. ......+.+|+.+++.++  |||++++++.+...        
T Consensus         6 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~E~~~l~~l~--h~~i~~~~~~~~~~~~~~~~~~   82 (303)
T 1zy4_A            6 SDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHT-EEKLSTILSEVMLLASLN--HQYVVRYYAAWLERRNFVKPMT   82 (303)
T ss_dssp             HHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEEE-HHHHHHHHHHHHHHTTCC--CTTBCCEEEEEEECCCCCC---
T ss_pred             ccchhhheeccCCcEEEEEEEEcCCCeEEEEEEEecc-HHHHHHHHHHHHHHHhcC--chHHHHHHHHHHhhcchhhhhc
Confidence            468999999999999999999 457899999999643 334567889999999999  99999999988653        


Q ss_pred             -----CCcccchhhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhcc
Q 039630          105 -----PSRILAPLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEI  170 (174)
Q Consensus       105 -----~~~~lv~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  170 (174)
                           +..++++  ++.+++.+...+.               .....+++..+..++.|++.||+|||++.
T Consensus        83 ~~~~~~~~~lv~--e~~~~~~L~~~l~---------------~~~~~~~~~~~~~i~~qi~~~l~~LH~~~  136 (303)
T 1zy4_A           83 AVKKKSTLFIQM--EYCENGTLYDLIH---------------SENLNQQRDEYWRLFRQILEALSYIHSQG  136 (303)
T ss_dssp             ---CEEEEEEEE--ECCCSCBHHHHHH---------------HSCGGGCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             ccccCCceEEEE--ecCCCCCHHHhhh---------------ccccccchHHHHHHHHHHHHHHHHHHhCC
Confidence                 2334454  5555544444221               11234677888899999999999999864

>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A

Probab=99.59  E-value=4.4e-16  Score=113.90  Aligned_cols=129  Identities=19%  Similarity=0.225  Sum_probs=81.2

Q ss_pred             cCCeeecceecccCCeeEEEEEEcCCCEEEEEEeeccCc--------cchhHHHHHHHHHhcccc-------cCCCeeee
Q 039630           33 TNGFRTSNKIGEGGFGSVYKGRLEDGTVVAVNVLSVESK--------QGETEFMSEVASMANINI-------CHENLVKL   97 (174)
Q Consensus        33 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~avK~~~~~~~--------~~~~~~~~e~~~l~~l~~-------~h~~i~~~   97 (174)
                      .++|++.+.||+|+||.||+|.. +++.||+|+++....        .....+.+|+.+++.++.       .|+|++++
T Consensus        19 ~~~y~~~~~lG~G~~g~V~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~~~~~~~h~niv~l   97 (336)
T 2vuw_A           19 TEKLQRCEKIGEGVFGEVFQTIA-DHTPVAIKIIAIEGPDLVNGSHQKTFEEILPEIIISKELSLLSGEVCNRTEGFIGL   97 (336)
T ss_dssp             HHHHHTCEEEEEETTEEEEEEEE-TTEEEEEEEEEESCSSCBTTBCCBCHHHHHHHHHHHHHHHHGGGCSSSBCCCBCCE
T ss_pred             cccchheeeecccCceEEEEEEe-CCceEEEEEEecCCccccccccchhHHHHHHHHHHHHHHHHhhccccccCCchhhh
Confidence            35688889999999999999987 689999999986521        223678899998887631       26666666


Q ss_pred             ecceecCC--Ccccchhhhh----------------hhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHH
Q 039630           98 HGGCIDGP--SRILAPLQAS----------------IEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGI  159 (174)
Q Consensus        98 ~~~~~~~~--~~~lv~~~~~----------------~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi  159 (174)
                      .+.+...+  +..++-.++.                .....++++++.+++.....       ....+++..+..++.||
T Consensus        98 ~~~~~~~~~~hp~iv~~~~~~~~~~~~~~~~~~~~~~~~~~lv~E~~~~g~ll~~~-------~~~~~~~~~~~~i~~qi  170 (336)
T 2vuw_A           98 NSVHCVQGSYPPLLLKAWDHYNSTKGSANDRPDFFKDDQLFIVLEFEFGGIDLEQM-------RTKLSSLATAKSILHQL  170 (336)
T ss_dssp             EEEEEEESSCCHHHHHHHHHHHHHTCCSSCCSCCCCTTCEEEEEEEECCCEETGGG-------TTTCCCHHHHHHHHHHH
T ss_pred             cceeEecCCCcHHHHHHHHHHhhhccccccCccccccCeEEEEEEecCCCccHHHH-------HhcCCCHHHHHHHHHHH
Confidence            65543210  1111110000                12223333343333221111       11347899999999999


Q ss_pred             HHHHHHhh-hc
Q 039630          160 ARGLAYIH-EE  169 (174)
Q Consensus       160 ~~gl~yLH-~~  169 (174)
                      +.||+||| ++
T Consensus       171 ~~aL~~lH~~~  181 (336)
T 2vuw_A          171 TASLAVAEASL  181 (336)
T ss_dssp             HHHHHHHHHHH
T ss_pred             HHHHHHHHHhC
Confidence            99999999 53

>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A

Probab=99.59  E-value=5.9e-15  Score=109.22  Aligned_cols=117  Identities=16%  Similarity=0.221  Sum_probs=95.0

Q ss_pred             CCeeecceecccCCeeEEEEEE-cCCCEEEEEEeeccCcc--------chhHHHHHHHHHhcc-cccCCCeeeeecceec
Q 039630           34 NGFRTSNKIGEGGFGSVYKGRL-EDGTVVAVNVLSVESKQ--------GETEFMSEVASMANI-NICHENLVKLHGGCID  103 (174)
Q Consensus        34 ~~~~~~~~lg~G~~g~V~~~~~-~~~~~~avK~~~~~~~~--------~~~~~~~e~~~l~~l-~~~h~~i~~~~~~~~~  103 (174)
                      ++|.+.+.||+|+||.||+|.. .+|..||||++......        ....+.+|+.++..+ +  ||||+++++.+..
T Consensus        94 ~~y~~~~~lg~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~--hp~iv~~~~~~~~  171 (365)
T 2y7j_A           94 QKYDPKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAG--HPHIITLIDSYES  171 (365)
T ss_dssp             HHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEETTSSCCCHHHHHHHHHHHHHHHHHHHHHTT--CTTBCCEEEEEEB
T ss_pred             hhcccceEEecCCCEEEEEEEECCCCcEEEEEEEEccccccCHHHHHHHHHHHHHHHHHHHHhcC--CCCEeEEEEEEee
Confidence            5699999999999999999995 47999999999755311        134578899999998 6  9999999999998


Q ss_pred             CCCcccchhhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhcc
Q 039630          104 GPSRILAPLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEI  170 (174)
Q Consensus       104 ~~~~~lv~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  170 (174)
                      .+..++++  ++.+++.+...+.                ....+++..+..++.|++.||.|||++.
T Consensus       172 ~~~~~lv~--e~~~g~~L~~~l~----------------~~~~l~~~~~~~i~~qi~~~L~~LH~~g  220 (365)
T 2y7j_A          172 SSFMFLVF--DLMRKGELFDYLT----------------EKVALSEKETRSIMRSLLEAVSFLHANN  220 (365)
T ss_dssp             SSEEEEEE--CCCTTCBHHHHHH----------------HHSSCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             CCEEEEEE--EeCCCCcHHHHHH----------------hcCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            88888888  7777766655331                1224788999999999999999999863

>4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A*

Probab=99.58  E-value=3.7e-15  Score=117.53  Aligned_cols=110  Identities=25%  Similarity=0.325  Sum_probs=87.5

Q ss_pred             ceecccCCeeEEEEEE---cCCCEEEEEEeeccC--ccchhHHHHHHHHHhcccccCCCeeeeecceecCCCcccchhhh
Q 039630           40 NKIGEGGFGSVYKGRL---EDGTVVAVNVLSVES--KQGETEFMSEVASMANINICHENLVKLHGGCIDGPSRILAPLQA  114 (174)
Q Consensus        40 ~~lg~G~~g~V~~~~~---~~~~~~avK~~~~~~--~~~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~~~~~~~lv~~~~  114 (174)
                      +.||+|+||.||+|.+   ..+..||||+++...  ......+.+|+.++..++  |+||+++++++.. +..++|+  +
T Consensus       375 ~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~E~~il~~l~--hpnIv~l~~~~~~-~~~~lv~--E  449 (635)
T 4fl3_A          375 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLD--NPYIVRMIGICEA-ESWMLVM--E  449 (635)
T ss_dssp             EEEEECSSEEEEEEEEECSSCEEEEEEEEECGGGGCGGGHHHHHHHHHHHHHCC--CTTBCCEEEEEES-SSEEEEE--E
T ss_pred             CEeccCCCEEEEEEEEcCCCcceEEEEEEeccccCCHHHHHHHHHHHHHHHhCC--CCCEeeEEEEEec-CCEEEEE--E
Confidence            4799999999999974   346789999997542  334578999999999999  9999999999864 4566777  7


Q ss_pred             hhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhcc
Q 039630          115 SIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEI  170 (174)
Q Consensus       115 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  170 (174)
                      +.+++.|...+.                ....+++..+..++.||+.||+|||++.
T Consensus       450 ~~~~g~L~~~l~----------------~~~~l~~~~~~~i~~qi~~~L~yLH~~~  489 (635)
T 4fl3_A          450 MAELGPLNKYLQ----------------QNRHVKDKNIIELVHQVSMGMKYLEESN  489 (635)
T ss_dssp             CCTTEEHHHHHH----------------HCTTCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             ccCCCCHHHHHh----------------hCCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            777777665431                1234788999999999999999999864

>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7

Probab=99.58  E-value=1.6e-15  Score=111.79  Aligned_cols=118  Identities=23%  Similarity=0.238  Sum_probs=94.8

Q ss_pred             CCeeecceecccCCeeEEEEEE----cCCCEEEEEEeeccC----ccchhHHHHHHHHHhcccccCCCeeeeecceecCC
Q 039630           34 NGFRTSNKIGEGGFGSVYKGRL----EDGTVVAVNVLSVES----KQGETEFMSEVASMANINICHENLVKLHGGCIDGP  105 (174)
Q Consensus        34 ~~~~~~~~lg~G~~g~V~~~~~----~~~~~~avK~~~~~~----~~~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~~~~  105 (174)
                      ++|.+.+.||+|+||.||++..    .+++.||+|+++...    ......+.+|+.++..+. .|+||+++++.+...+
T Consensus        54 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~-~h~~iv~~~~~~~~~~  132 (355)
T 1vzo_A           54 ENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIR-QSPFLVTLHYAFQTET  132 (355)
T ss_dssp             GGEEEEEEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHH-TCTTBCCEEEEEEETT
T ss_pred             cceEEEEEeccCCCEEEEEEEEcccCCCCeEEEEEEEeHHHhhhhhhHHHHHHHHHHHHHHcc-CCCceeEEEEEEeeCc
Confidence            5799999999999999999985    368899999997442    233456778999999883 3999999999999988


Q ss_pred             CcccchhhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhcc
Q 039630          106 SRILAPLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEI  170 (174)
Q Consensus       106 ~~~lv~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  170 (174)
                      ..++++  ++.+++.+...+..                ...+++..+..++.|++.||.|||++.
T Consensus       133 ~~~lv~--e~~~~~~L~~~l~~----------------~~~~~~~~~~~~~~qi~~aL~~LH~~~  179 (355)
T 1vzo_A          133 KLHLIL--DYINGGELFTHLSQ----------------RERFTEHEVQIYVGEIVLALEHLHKLG  179 (355)
T ss_dssp             EEEEEE--CCCCSCBHHHHHHH----------------HSCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             eEEEEe--ecCCCCCHHHHHHH----------------cCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            888888  77776666554321                224788999999999999999999863

>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens}

Probab=99.58  E-value=6.3e-15  Score=107.50  Aligned_cols=118  Identities=23%  Similarity=0.416  Sum_probs=90.1

Q ss_pred             cCCeeecceecccCCeeEEEEE-EcCCCE----EEEEEeecc-CccchhHHHHHHHHHhcccccCCCeeeeecceecCCC
Q 039630           33 TNGFRTSNKIGEGGFGSVYKGR-LEDGTV----VAVNVLSVE-SKQGETEFMSEVASMANINICHENLVKLHGGCIDGPS  106 (174)
Q Consensus        33 ~~~~~~~~~lg~G~~g~V~~~~-~~~~~~----~avK~~~~~-~~~~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~~~~~  106 (174)
                      .++|++.+.||+|+||.||+|. ..++..    +++|.+... .......+.+|+.++..++  ||||+++++.+.... 
T Consensus        14 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~iK~~~~~~~~~~~~~~~~E~~~l~~l~--hp~iv~~~~~~~~~~-   90 (327)
T 3lzb_A           14 ETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD--NPHVCRLLGICLTST-   90 (327)
T ss_dssp             TTTEEEEEEEEECSSEEEEEEEECCTTCSCCEEEEEEEECCCSSCCCHHHHHHHHHHHTTCC--BTTBCCCCEEEESSS-
T ss_pred             HhHceEEEEeeeCCCeEEEEEEEcCCCceEEEEEEEEeeccccCHHHHHHHHHHHHHHHhCC--CCCeeEEEEEEecCC-
Confidence            3679999999999999999998 444543    577777543 3445678999999999999  999999999998765 


Q ss_pred             cccchhhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhcc
Q 039630          107 RILAPLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEI  170 (174)
Q Consensus       107 ~~lv~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  170 (174)
                      .++++  ++...+.+...+..               ....+++..++.++.|++.||.|||++.
T Consensus        91 ~~~v~--~~~~~g~L~~~l~~---------------~~~~~~~~~~~~i~~qi~~aL~~LH~~~  137 (327)
T 3lzb_A           91 VQLIT--QLMPFGCLLDYVRE---------------HKDNIGSQYLLNWCVQIAKGMNYLEDRR  137 (327)
T ss_dssp             EEEEE--CCCSSCBHHHHHHH---------------TTTCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             ceEEE--EecCCCcHHHHHHh---------------cCCCCCHHHHHHHHHHHHHHHHHHhhCC
Confidence            45555  55555555553311               1234788999999999999999999864

>4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A

Probab=99.58  E-value=4.2e-15  Score=110.20  Aligned_cols=115  Identities=21%  Similarity=0.278  Sum_probs=89.7

Q ss_pred             cCCeeecceecccCCeeEEEEE-EcCCCEEEEEEeeccC--ccchhHHHHHHHHHhcccccCCCeeeeecceecCCCc--
Q 039630           33 TNGFRTSNKIGEGGFGSVYKGR-LEDGTVVAVNVLSVES--KQGETEFMSEVASMANINICHENLVKLHGGCIDGPSR--  107 (174)
Q Consensus        33 ~~~~~~~~~lg~G~~g~V~~~~-~~~~~~~avK~~~~~~--~~~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~~~~~~--  107 (174)
                      .++|...+.||+|+||.||+|. ..+++.||+|+++...  ......+.+|+.+++.++  |+||+++++++...+..  
T Consensus        41 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~--h~niv~~~~~~~~~~~~~~  118 (371)
T 4exu_A           41 PKTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQ--HENVIGLLDVFTPASSLRN  118 (371)
T ss_dssp             ETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSTTSSHHHHHHHHHHHHHHHHCC--CTTBCCCSEEECSCSSSTT
T ss_pred             cccEEEEeEEecCCCeEEEEEEECCCCCEEEEEEecccccchhHHHHHHHHHHHHHhcC--CCCchhhhhheeccCCccc
Confidence            4679999999999999999998 5578999999997542  223567889999999999  99999999999877654  


Q ss_pred             ----ccchhhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhcc
Q 039630          108 ----ILAPLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEI  170 (174)
Q Consensus       108 ----~lv~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  170 (174)
                          ++++  ++... .+...+                  ...+++..+..++.|++.||.|||++.
T Consensus       119 ~~~~~lv~--e~~~~-~l~~~~------------------~~~~~~~~~~~i~~qi~~aL~~LH~~~  164 (371)
T 4exu_A          119 FYDFYLVM--PFMQT-DLQKIM------------------GMEFSEEKIQYLVYQMLKGLKYIHSAG  164 (371)
T ss_dssp             CCCCEEEE--ECCCE-EHHHHT------------------TSCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             ceeEEEEE--ccccc-cHHHHh------------------hcCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence                5555  44332 222211                  123789999999999999999999864

>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens}

Probab=99.58  E-value=2.2e-15  Score=110.61  Aligned_cols=116  Identities=18%  Similarity=0.249  Sum_probs=83.0

Q ss_pred             cCCeeecceecccCCeeEEEEEEc----CCCEEEEEEeeccCcc-----------chhHHHHHHHHHhcccccCCCeeee
Q 039630           33 TNGFRTSNKIGEGGFGSVYKGRLE----DGTVVAVNVLSVESKQ-----------GETEFMSEVASMANINICHENLVKL   97 (174)
Q Consensus        33 ~~~~~~~~~lg~G~~g~V~~~~~~----~~~~~avK~~~~~~~~-----------~~~~~~~e~~~l~~l~~~h~~i~~~   97 (174)
                      .++|.+.+.||+|+||.||+|...    ++..+|+|++......           ....+.+|+.++..++  |+||+++
T Consensus        36 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~--h~ni~~~  113 (345)
T 2v62_A           36 GNQWVLGKKIGSGGFGLIYLAFPTNKPEKDARHVVKVEYQENGPLFSELKFYQRVAKKDCIKKWIERKQLD--YLGIPLF  113 (345)
T ss_dssp             SCEEEEEEEC------CEEEEEESSSCGGGCCEEEEEEECC-CHHHHHHHHHHHHCCHHHHHHHHHHHTCS--CCCCCCE
T ss_pred             CceEEEEeeEeecCCeEEEEEEecCCCCccceEEEEeeecCCcchHHHHHHHHHHhhhHHHHHHHhhcccc--ccCccee
Confidence            467999999999999999999953    5788999999754321           1233667788888888  9999999


Q ss_pred             ecceec----CCCcccchhhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhc
Q 039630           98 HGGCID----GPSRILAPLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEE  169 (174)
Q Consensus        98 ~~~~~~----~~~~~lv~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~  169 (174)
                      ++.+..    ....++++  ++. ++.|...+                .....+++..++.++.|++.||+|||++
T Consensus       114 ~~~~~~~~~~~~~~~lv~--e~~-~~~L~~~l----------------~~~~~~~~~~~~~i~~qi~~aL~~LH~~  170 (345)
T 2v62_A          114 YGSGLTEFKGRSYRFMVM--ERL-GIDLQKIS----------------GQNGTFKKSTVLQLGIRMLDVLEYIHEN  170 (345)
T ss_dssp             EEEEEEESSSCEEEEEEE--ECE-EEEHHHHC----------------BGGGBCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             ecccccccCCCcEEEEEE--ecc-CCCHHHHH----------------HhcCCCCHHHHHHHHHHHHHHHHHHHhC
Confidence            999887    55667776  555 45554422                1222588999999999999999999986

>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A

Probab=99.58  E-value=3.1e-15  Score=118.62  Aligned_cols=119  Identities=18%  Similarity=0.143  Sum_probs=97.0

Q ss_pred             hcCCeeecceecccCCeeEEEEE-EcCCCEEEEEEeecc---CccchhHHHHHHHHHhcccccCCCeeeeecceecCCCc
Q 039630           32 ATNGFRTSNKIGEGGFGSVYKGR-LEDGTVVAVNVLSVE---SKQGETEFMSEVASMANINICHENLVKLHGGCIDGPSR  107 (174)
Q Consensus        32 ~~~~~~~~~~lg~G~~g~V~~~~-~~~~~~~avK~~~~~---~~~~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~~~~~~  107 (174)
                      ..++|.+++.||+|+||.||++. ..+++.||+|+++..   .......+..|..++..+. .|++|+.+++++.+.+..
T Consensus       339 ~~~~f~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~~~E~~~l~~~~-~~~~i~~l~~~~~~~~~~  417 (674)
T 3pfq_A          339 KLTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPG-KPPFLTQLHSCFQTMDRL  417 (674)
T ss_dssp             -CTTEEEEEESSBTTTBCEEEEEESSSCCEEEEEEEEHHHHHHTTTTHHHHHHHHHHTCTT-CCTTBCCEEEECBCSSEE
T ss_pred             cccceEEEEEEccCCCEEEEEEEECCCCcEEEEEEEeccccccHHHHHHHHHHHHHHHhcc-CCCeEEEEEEEEEeCCEE
Confidence            34679999999999999999999 556889999999754   2344566788999998874 499999999999998888


Q ss_pred             ccchhhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhc
Q 039630          108 ILAPLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEE  169 (174)
Q Consensus       108 ~lv~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~  169 (174)
                      ++|+  ++.+++.|...+.                ....+++..+..++.||+.||+|||++
T Consensus       418 ~lV~--E~~~gg~L~~~l~----------------~~~~~~~~~~~~~~~qi~~aL~~LH~~  461 (674)
T 3pfq_A          418 YFVM--EYVNGGDLMYHIQ----------------QVGRFKEPHAVFYAAEIAIGLFFLQSK  461 (674)
T ss_dssp             EEEE--ECCCSCBHHHHHH----------------HHSSCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             EEEE--eCcCCCcHHHHHH----------------hcCCCCHHHHHHHHHHHHHHHHHHHhC
Confidence            8888  7777777765442                123478999999999999999999986

>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ...

Probab=99.58  E-value=3.1e-15  Score=110.58  Aligned_cols=117  Identities=20%  Similarity=0.227  Sum_probs=89.6

Q ss_pred             hcCCeeecceecccCCeeEEEEE-EcCCCEEEEEEeeccC-ccchhHHHHHHHHHhcccccCCCeeeeecceecCC----
Q 039630           32 ATNGFRTSNKIGEGGFGSVYKGR-LEDGTVVAVNVLSVES-KQGETEFMSEVASMANINICHENLVKLHGGCIDGP----  105 (174)
Q Consensus        32 ~~~~~~~~~~lg~G~~g~V~~~~-~~~~~~~avK~~~~~~-~~~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~~~~----  105 (174)
                      ..++|++.+.||+|+||.||++. ..++..||+|++.... ......+.+|+.++..++  |+||+++++.+...+    
T Consensus        25 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~--h~niv~~~~~~~~~~~~~~  102 (364)
T 3qyz_A           25 VGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFR--HENIIGINDIIRAPTIEQM  102 (364)
T ss_dssp             CTTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCTTCHHHHHHHHHHHHHHHHCC--CTTBCCCCEEECCSSTTTC
T ss_pred             ccccEEEEEEeecCCCeEEEEEEECCCCeEEEEEEeccccCcHHHHHHHHHHHHHHhcC--CCCCccceeEEecCCcccc
Confidence            34679999999999999999998 4578899999997442 333467889999999999  999999999986653    


Q ss_pred             -CcccchhhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhcc
Q 039630          106 -SRILAPLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEI  170 (174)
Q Consensus       106 -~~~lv~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  170 (174)
                       ..++++  ++.++ .+...+                 ....+++..+..++.|++.||.|||++.
T Consensus       103 ~~~~iv~--e~~~~-~L~~~l-----------------~~~~~~~~~~~~i~~qi~~aL~~LH~~~  148 (364)
T 3qyz_A          103 KDVYIVQ--DLMET-DLYKLL-----------------KTQHLSNDHICYFLYQILRGLKYIHSAN  148 (364)
T ss_dssp             CCEEEEE--ECCSE-EHHHHH-----------------HHCCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             ceEEEEE--cccCc-CHHHHH-----------------HhCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence             345555  44432 232211                 1124788999999999999999999863

>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A*

Probab=99.57  E-value=5.6e-15  Score=105.33  Aligned_cols=121  Identities=26%  Similarity=0.306  Sum_probs=92.0

Q ss_pred             HhhcCCeeecceecccCCeeEEEEEEcC----CCEEEEEEeecc-CccchhHHHHHHHHHhcccccCCCeeeeecceecC
Q 039630           30 KIATNGFRTSNKIGEGGFGSVYKGRLED----GTVVAVNVLSVE-SKQGETEFMSEVASMANINICHENLVKLHGGCIDG  104 (174)
Q Consensus        30 ~~~~~~~~~~~~lg~G~~g~V~~~~~~~----~~~~avK~~~~~-~~~~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~~~  104 (174)
                      ....++|.+.+.||+|+||.||+|....    +..||+|.++.. .......+.+|+.+++.++  ||||+++++++.. 
T Consensus         8 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~--h~~i~~~~~~~~~-   84 (281)
T 3cc6_A            8 GIAREDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLD--HPHIVKLIGIIEE-   84 (281)
T ss_dssp             SCCGGGEEEEEEEEECSSSEEEEEEEECTTCCEEEEEEEECCTTSCHHHHHHHHHHHHHHHHHC--CTTBCCEEEEECS-
T ss_pred             eecccceEEEEEEEecCCeeEEEeEEcCCCCCcceEEEEecccccCchHHHHHHHHHHHHHhCC--CCCcceEEEEEcC-
Confidence            3345679999999999999999998432    236999999755 3344667899999999999  9999999998765 


Q ss_pred             CCcccchhhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhcc
Q 039630          105 PSRILAPLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEI  170 (174)
Q Consensus       105 ~~~~lv~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  170 (174)
                      +..++++  ++.+++.+...+..               ....+++..+..++.|++.||.|||++.
T Consensus        85 ~~~~~v~--e~~~~~~L~~~l~~---------------~~~~~~~~~~~~~~~~i~~~l~~lH~~~  133 (281)
T 3cc6_A           85 EPTWIIM--ELYPYGELGHYLER---------------NKNSLKVLTLVLYSLQICKAMAYLESIN  133 (281)
T ss_dssp             SSCEEEE--ECCTTCBHHHHHHH---------------HTTTCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             CCCEEEE--ecCCCCCHHHHHHh---------------ccccCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            4456666  66666655543311               1224788899999999999999999864

>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7

Probab=99.57  E-value=6e-15  Score=109.52  Aligned_cols=117  Identities=22%  Similarity=0.301  Sum_probs=89.5

Q ss_pred             CeeecceecccCCeeEEEEEEc--C--CCEEEEEEeecc-CccchhHHHHHHHHHhcccccCCCeeeeecceecC-CCcc
Q 039630           35 GFRTSNKIGEGGFGSVYKGRLE--D--GTVVAVNVLSVE-SKQGETEFMSEVASMANINICHENLVKLHGGCIDG-PSRI  108 (174)
Q Consensus        35 ~~~~~~~lg~G~~g~V~~~~~~--~--~~~~avK~~~~~-~~~~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~~~-~~~~  108 (174)
                      .|...+.||+|+||.||+|...  +  +..+|+|.++.. .......+.+|+.+++.++  ||||+++++++... +..+
T Consensus        90 ~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l~--hpnIv~~~~~~~~~~~~~~  167 (373)
T 3c1x_A           90 IVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFS--HPNVLSLLGICLRSEGSPL  167 (373)
T ss_dssp             EEEEEEEEECCSSSEEEEEEEEETTTEEEEEEEEECCSCSCSHHHHHHHHHHTTSTTCC--CTTBCCCCEEECCCSSCCE
T ss_pred             eeecCcEeeeCCCeEEEEEEEECCCCcEEEEEEEEcCCCCCHHHHHHHHHHHHHHHhCC--CCCcceEEEEEEcCCCCeE
Confidence            3677899999999999999843  2  236899998644 2344677899999999999  99999999987544 4666


Q ss_pred             cchhhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhcc
Q 039630          109 LAPLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEI  170 (174)
Q Consensus       109 lv~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  170 (174)
                      +++  ++.+++.|...+.               .....+++..+..++.|++.||.|||++.
T Consensus       168 lv~--e~~~~g~L~~~l~---------------~~~~~~~~~~~~~i~~qi~~aL~~LH~~~  212 (373)
T 3c1x_A          168 VVL--PYMKHGDLRNFIR---------------NETHNPTVKDLIGFGLQVAKGMKFLASKK  212 (373)
T ss_dssp             EEE--ECCTTCBHHHHHH---------------CTTCCCBHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             EEE--ECCCCCCHHHHHh---------------hcccCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            777  7777766665431               12234678888999999999999999863

>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II}

Probab=99.57  E-value=5.1e-15  Score=110.30  Aligned_cols=117  Identities=19%  Similarity=0.283  Sum_probs=82.6

Q ss_pred             cCCeeecceecccCCeeEEEEE-EcCCCEEEEEEeecc--CccchhHHHHHHHHHhcccccCCCeeeeecceecCC--Cc
Q 039630           33 TNGFRTSNKIGEGGFGSVYKGR-LEDGTVVAVNVLSVE--SKQGETEFMSEVASMANINICHENLVKLHGGCIDGP--SR  107 (174)
Q Consensus        33 ~~~~~~~~~lg~G~~g~V~~~~-~~~~~~~avK~~~~~--~~~~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~~~~--~~  107 (174)
                      .++|++.+.||+|+||.||+|. ..+++.||+|.+...  .......+.+|+.++..+. .|+||+++++++...+  ..
T Consensus         8 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~-~h~niv~l~~~~~~~~~~~~   86 (388)
T 3oz6_A            8 LRKYELVKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELS-GHENIVNLLNVLRADNDRDV   86 (388)
T ss_dssp             HTTEEEEEC-------CEEEEEETTTCCEEEEEEECC--CCHHHHHHHHHHHHHHHHTT-TCTTBCCEEEEEECTTSSCE
T ss_pred             cCceEEEEEeeeCCCeEEEEEEECCCCCEEEEEEecccccChHHHHHHHHHHHHHHhcc-CCCCCCeeeeEEecCCCCEE
Confidence            4679999999999999999998 567899999999644  2334566789999999885 5999999999997654  45


Q ss_pred             ccchhhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhcc
Q 039630          108 ILAPLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEI  170 (174)
Q Consensus       108 ~lv~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  170 (174)
                      ++|+  +++++ .+...+                 ....+++.....++.|++.||+|||++.
T Consensus        87 ~lv~--e~~~~-~L~~~~-----------------~~~~~~~~~~~~i~~qi~~~L~~LH~~~  129 (388)
T 3oz6_A           87 YLVF--DYMET-DLHAVI-----------------RANILEPVHKQYVVYQLIKVIKYLHSGG  129 (388)
T ss_dssp             EEEE--ECCSE-EHHHHH-----------------HHTCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             EEEe--cccCc-CHHHHH-----------------HcCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            6776  55542 333211                 1124788888899999999999999753

>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ...

Probab=99.57  E-value=4.9e-15  Score=109.75  Aligned_cols=122  Identities=24%  Similarity=0.290  Sum_probs=82.6

Q ss_pred             cCCeeecceecccCCeeEEEEE-EcCCCEEEEEEeeccC--ccchhHHHHHHHHHhcccccCCCeeeeecceecCCCccc
Q 039630           33 TNGFRTSNKIGEGGFGSVYKGR-LEDGTVVAVNVLSVES--KQGETEFMSEVASMANINICHENLVKLHGGCIDGPSRIL  109 (174)
Q Consensus        33 ~~~~~~~~~lg~G~~g~V~~~~-~~~~~~~avK~~~~~~--~~~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~~~~~~~l  109 (174)
                      .++|.+.+.||+|+||.||+|. ..+|..||+|++....  ......+.+|+.+++.++  |+||+++++++......  
T Consensus        28 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~--hpnIv~~~~~~~~~~~~--  103 (367)
T 2fst_X           28 PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMK--HENVIGLLDVFTPARSL--  103 (367)
T ss_dssp             ETTEEEEEECC----CCEEEEEETTTTEEEEEEECSSTTSSHHHHHHHHHHHHHHHHCC--CTTBCCCSEEECSCSSG--
T ss_pred             CCceEEeeEEeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCC--CCCCCcEEEEEecCCcc--
Confidence            3679999999999999999998 5678999999996542  234567889999999999  99999999998654211  


Q ss_pred             chhhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhcc
Q 039630          110 APLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEI  170 (174)
Q Consensus       110 v~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  170 (174)
                          +......++++++.+ ++..+       .....+++..+..++.|++.||.|||++.
T Consensus       104 ----~~~~~~~lv~e~~~~-~L~~~-------~~~~~l~~~~~~~i~~qi~~aL~~LH~~g  152 (367)
T 2fst_X          104 ----EEFNDVYLVTHLMGA-DLNNI-------VKCQKLTDDHVQFLIYQILRGLKYIHSAD  152 (367)
T ss_dssp             ----GGCCCCEEEEECCCE-ECC------------CCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             ----ccCCeEEEEecccCC-CHHHH-------HhcCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence                001112222333321 11111       11235889999999999999999999864

>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens}

Probab=99.57  E-value=2e-15  Score=109.17  Aligned_cols=120  Identities=20%  Similarity=0.261  Sum_probs=84.6

Q ss_pred             HhhcCCeeecceecccCCeeEEEEE-EcCCCEEEEEEeeccCc------cchhHHHHHHHHHhcc----cccCCCeeeee
Q 039630           30 KIATNGFRTSNKIGEGGFGSVYKGR-LEDGTVVAVNVLSVESK------QGETEFMSEVASMANI----NICHENLVKLH   98 (174)
Q Consensus        30 ~~~~~~~~~~~~lg~G~~g~V~~~~-~~~~~~~avK~~~~~~~------~~~~~~~~e~~~l~~l----~~~h~~i~~~~   98 (174)
                      ....++|++.+.||+|+||.||++. ..++..||+|+++....      .....+.+|+.++..+    +  |+||++++
T Consensus        27 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~--h~~i~~~~  104 (312)
T 2iwi_A           27 EAFEAEYRLGPLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGG--HPGVIRLL  104 (312)
T ss_dssp             ------CEEEEEEEEETTEEEEEEECTTTCCEEEEEECCSTTTC--------CCCCHHHHHHHHHHSSCC--CSSBCCEE
T ss_pred             hhhhhceEEeeEEEcCCCEEEEEEEEccCCeEEEEEEEecccccccccchhhHHHHHHHHHHHhhcccCC--CCCeeeEE
Confidence            3445679999999999999999998 56788999999975422      1233466788888887    7  99999999


Q ss_pred             cceecCCCcccchhhhh-hhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhc
Q 039630           99 GGCIDGPSRILAPLQAS-IEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEE  169 (174)
Q Consensus        99 ~~~~~~~~~~lv~~~~~-~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~  169 (174)
                      +++...+..++++  ++ ..++.+...+.                ....+++..+..++.|++.||.|||++
T Consensus       105 ~~~~~~~~~~~v~--e~~~~~~~L~~~l~----------------~~~~~~~~~~~~~~~qi~~~l~~lH~~  158 (312)
T 2iwi_A          105 DWFETQEGFMLVL--ERPLPAQDLFDYIT----------------EKGPLGEGPSRCFFGQVVAAIQHCHSR  158 (312)
T ss_dssp             EEC-----CEEEE--ECCSSEEEHHHHHH----------------HHCSCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred             EEEecCCeEEEEE--EecCCCCCHHHHHH----------------hcCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence            9998888888887  54 34444444321                122478999999999999999999986

>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A*

Probab=99.57  E-value=1.5e-14  Score=103.91  Aligned_cols=110  Identities=25%  Similarity=0.392  Sum_probs=84.9

Q ss_pred             cCCeeecceecccCCeeEEEEEEcCCCEEEEEEeeccCccchhHHHHHHHHHhc--ccccCCCeeeeecceecC----CC
Q 039630           33 TNGFRTSNKIGEGGFGSVYKGRLEDGTVVAVNVLSVESKQGETEFMSEVASMAN--INICHENLVKLHGGCIDG----PS  106 (174)
Q Consensus        33 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~avK~~~~~~~~~~~~~~~e~~~l~~--l~~~h~~i~~~~~~~~~~----~~  106 (174)
                      .++|++.+.||+|+||.||+|.. ++..||+|++...   ....+..|.+++..  ++  ||||+++++.+...    ..
T Consensus         7 ~~~y~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~---~~~~~~~e~~~~~~~~l~--h~niv~~~~~~~~~~~~~~~   80 (301)
T 3q4u_A            7 ARDITLLECVGKGRYGEVWRGSW-QGENVAVKIFSSR---DEKSWFRETELYNTVMLR--HENILGFIASDMTSRHSSTQ   80 (301)
T ss_dssp             GGGCEEEEEEEECSSEEEEEEEE-TTEEEEEEEECGG---GHHHHHHHHHHHHHTCCC--CTTBCCEEEEEEEEETTEEE
T ss_pred             cCcEEEEEeeccCCCcEEEEEEE-CCEEEEEEEeccc---cchhhHHHHHHHHHhhcc--CcCeeeEEEeeccccCCCce
Confidence            46799999999999999999987 5889999999633   34456667777766  56  99999999986543    33


Q ss_pred             cccchhhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhh
Q 039630          107 RILAPLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIH  167 (174)
Q Consensus       107 ~~lv~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH  167 (174)
                      .++++  ++.+++.+...+                 ....+++..+..++.|++.||+|||
T Consensus        81 ~~lv~--e~~~~g~L~~~l-----------------~~~~~~~~~~~~i~~~i~~~l~~lH  122 (301)
T 3q4u_A           81 LWLIT--HYHEMGSLYDYL-----------------QLTTLDTVSCLRIVLSIASGLAHLH  122 (301)
T ss_dssp             EEEEE--CCCTTCBHHHHH-----------------TTCCBCHHHHHHHHHHHHHHHHHHH
T ss_pred             eEEeh--hhccCCCHHHHH-----------------hhcccCHHHHHHHHHHHHHHHHHHH
Confidence            45666  666666665533                 1224789999999999999999999

>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A*

Probab=99.57  E-value=3.2e-15  Score=106.46  Aligned_cols=122  Identities=20%  Similarity=0.333  Sum_probs=92.9

Q ss_pred             hHHhhcCCeeecceecccCCeeEEEEEEcCCCEEEEEEeeccCccchhHHHHHHHHHhcccccCCCeeeeecceecC-CC
Q 039630           28 ELKIATNGFRTSNKIGEGGFGSVYKGRLEDGTVVAVNVLSVESKQGETEFMSEVASMANINICHENLVKLHGGCIDG-PS  106 (174)
Q Consensus        28 ~~~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~avK~~~~~~~~~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~~~-~~  106 (174)
                      .|....++|++.+.||+|+||.||++... +..+|+|+++..  ...+.+.+|+.++..++  |+|++++++.+... +.
T Consensus        15 ~~~~~~~~y~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~--~~~~~~~~E~~~l~~l~--h~~iv~~~~~~~~~~~~   89 (278)
T 1byg_A           15 GWALNMKELKLLQTIGKGEFGDVMLGDYR-GNKVAVKCIKND--ATAQAFLAEASVMTQLR--HSNLVQLLGVIVEEKGG   89 (278)
T ss_dssp             CCBCCGGGEEEEEEEEECSSCEEEEEEET-TEEEEEEECCCC--C--HHHHHTHHHHTTCC--CTTBCCEEEEECCC--C
T ss_pred             cccCChhhceEEeEEecCCCceEEEEEEc-CCEEEEEEecch--hHHHHHHHHHHHHHhCC--CCCEeeEEEEEEcCCCc
Confidence            34445578999999999999999999864 889999999743  24567889999999999  99999999987654 45


Q ss_pred             cccchhhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhcc
Q 039630          107 RILAPLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEI  170 (174)
Q Consensus       107 ~~lv~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  170 (174)
                      .++++  ++.+++.+...+...              ....+++..+..++.|++.||.|||++.
T Consensus        90 ~~lv~--e~~~~~~L~~~l~~~--------------~~~~~~~~~~~~~~~~i~~~l~~lH~~~  137 (278)
T 1byg_A           90 LYIVT--EYMAKGSLVDYLRSR--------------GRSVLGGDCLLKFSLDVCEAMEYLEGNN  137 (278)
T ss_dssp             CEEEE--CCCTTEEHHHHHHHH--------------HHHHCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             eEEEE--ecCCCCCHHHHHHhc--------------ccccCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            67777  666666655433110              1123688889999999999999999864

>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A*

Probab=99.57  E-value=7.5e-15  Score=107.85  Aligned_cols=116  Identities=14%  Similarity=0.195  Sum_probs=88.9

Q ss_pred             cCCeeecceecccCCeeEEEEEE-cCCCEEEEEEeeccC-ccchhHHHHHHHHHhcccccCCCeeeeecceecC-----C
Q 039630           33 TNGFRTSNKIGEGGFGSVYKGRL-EDGTVVAVNVLSVES-KQGETEFMSEVASMANINICHENLVKLHGGCIDG-----P  105 (174)
Q Consensus        33 ~~~~~~~~~lg~G~~g~V~~~~~-~~~~~~avK~~~~~~-~~~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~~~-----~  105 (174)
                      .++|.+.+.||+|+||.||++.. .++..||+|+++... ......+.+|+.+++.++  |+||+++++.+...     .
T Consensus        10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~--h~~iv~~~~~~~~~~~~~~~   87 (353)
T 2b9h_A           10 SSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFK--HENIITIFNIQRPDSFENFN   87 (353)
T ss_dssp             CTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCSSHHHHHHHHHHHHHHHHCC--CTTBCCEEEECCCSCSTTCC
T ss_pred             ccceEEeeEEcCCCCeEEEEEEECCCCcEEEEEeecccccchHHHHHHHHHHHHHhCc--CCCcCCeeeeecccccCccc
Confidence            46799999999999999999994 578899999996442 233556889999999999  99999999987654     4


Q ss_pred             CcccchhhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhcc
Q 039630          106 SRILAPLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEI  170 (174)
Q Consensus       106 ~~~lv~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  170 (174)
                      ..++++  ++..+ .+...+                 ....+++..+..++.|++.||.|||++.
T Consensus        88 ~~~lv~--e~~~~-~L~~~~-----------------~~~~~~~~~~~~~~~qi~~~L~~LH~~~  132 (353)
T 2b9h_A           88 EVYIIQ--ELMQT-DLHRVI-----------------STQMLSDDHIQYFIYQTLRAVKVLHGSN  132 (353)
T ss_dssp             CEEEEE--CCCSE-EHHHHH-----------------HHCCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             eEEEEE--eccCc-cHHHHH-----------------hhcCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            456666  44432 232211                 1124788999999999999999999863

>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A*

Probab=99.56  E-value=9.1e-15  Score=106.42  Aligned_cols=126  Identities=14%  Similarity=0.179  Sum_probs=91.3

Q ss_pred             hHHhhcCCeeecceecccCCeeEEEEEE-cCCCEEEEEEeeccC-ccchhHHHHHHH-HHhcccccCCCeeeeecceecC
Q 039630           28 ELKIATNGFRTSNKIGEGGFGSVYKGRL-EDGTVVAVNVLSVES-KQGETEFMSEVA-SMANINICHENLVKLHGGCIDG  104 (174)
Q Consensus        28 ~~~~~~~~~~~~~~lg~G~~g~V~~~~~-~~~~~~avK~~~~~~-~~~~~~~~~e~~-~l~~l~~~h~~i~~~~~~~~~~  104 (174)
                      .+....++|...+.||+|+||.||++.. .+++.||+|+++... ......+..|+. +++.++  |+||+++++++...
T Consensus        16 ~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~~~--h~niv~~~~~~~~~   93 (327)
T 3aln_A           16 HWDFTAEDLKDLGEIGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEKEQKQLLMDLDVVMRSSD--CPYIVQFYGALFRE   93 (327)
T ss_dssp             EECCCSCSEEC-CEEEECSSEEEEEEEETTTTEEEEEEEEECCCCHHHHHHHHHHHHHHHSSCC--CTTBCCEEEEEECS
T ss_pred             hcccCHHHhhehheeccCCCEEEEEEEEcCCCCEEEEEEeecccCchHHHHHHHHHHHHHHcCC--CCcEeeeeeEEEeC
Confidence            4445567899999999999999999994 578999999997552 223445566665 666777  99999999999998


Q ss_pred             CCcccchhhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhc
Q 039630          105 PSRILAPLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEE  169 (174)
Q Consensus       105 ~~~~lv~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~  169 (174)
                      +..++++  ++.++ .+...+..         ..  ......+++..+..++.|++.||.|||++
T Consensus        94 ~~~~lv~--e~~~~-~l~~~~~~---------~~--~~~~~~~~~~~~~~i~~~i~~~l~~lH~~  144 (327)
T 3aln_A           94 GDCWICM--ELMST-SFDKFYKY---------VY--SVLDDVIPEEILGKITLATVKALNHLKEN  144 (327)
T ss_dssp             SEEEEEE--CCCSE-EHHHHHHH---------HH--HTTCCCCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CceEEEE--eecCC-ChHHHHHH---------HH--hhhcccCcHHHHHHHHHHHHHHHHHHhcc
Confidence            8888888  55443 22211100         00  01123578899999999999999999986

>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens}

Probab=99.56  E-value=1.7e-14  Score=106.11  Aligned_cols=115  Identities=22%  Similarity=0.270  Sum_probs=88.1

Q ss_pred             cCCeeecceecccCCeeEEEEE-EcCCCEEEEEEeeccC--ccchhHHHHHHHHHhcccccCCCeeeeecceecCCCc--
Q 039630           33 TNGFRTSNKIGEGGFGSVYKGR-LEDGTVVAVNVLSVES--KQGETEFMSEVASMANINICHENLVKLHGGCIDGPSR--  107 (174)
Q Consensus        33 ~~~~~~~~~lg~G~~g~V~~~~-~~~~~~~avK~~~~~~--~~~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~~~~~~--  107 (174)
                      .++|...+.||+|+||.||+|. ..+|..||+|++....  ......+.+|+.+++.++  |+||+++++++...+..  
T Consensus        23 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~--h~~iv~~~~~~~~~~~~~~  100 (353)
T 3coi_A           23 PKTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQ--HENVIGLLDVFTPASSLRN  100 (353)
T ss_dssp             ETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEESSTTSSHHHHHHHHHHHHHHHHCC--CTTBCCCSEEECSCSSGGG
T ss_pred             CceEEEeeeEecCCCeEEEEEEECCCCCEEEEEEecccccchHHHHHHHHHHHHHHhcC--CCCcccHhheEeccccccc
Confidence            3579999999999999999998 4578999999997542  223567889999999999  99999999999876543  


Q ss_pred             ----ccchhhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhcc
Q 039630          108 ----ILAPLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEI  170 (174)
Q Consensus       108 ----~lv~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  170 (174)
                          ++++  ++..+ .+...                  ....+++..+..++.|++.||.|||++.
T Consensus       101 ~~~~~lv~--e~~~~-~l~~~------------------~~~~~~~~~~~~i~~qi~~al~~LH~~~  146 (353)
T 3coi_A          101 FYDFYLVM--PFMQT-DLQKI------------------MGLKFSEEKIQYLVYQMLKGLKYIHSAG  146 (353)
T ss_dssp             CCCCEEEE--ECCSE-EGGGT------------------TTSCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             ceeEEEEe--ccccC-CHHHH------------------hcCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence                4444  33331 22110                  0123788999999999999999999864

>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens}

Probab=99.56  E-value=2e-14  Score=103.93  Aligned_cols=114  Identities=25%  Similarity=0.421  Sum_probs=90.0

Q ss_pred             CCeeecceecccCCeeEEEEEEcCCCEEEEEEeeccCccchhHHHHHHHHHhcccccCCCeeeeecceecCCCcccchhh
Q 039630           34 NGFRTSNKIGEGGFGSVYKGRLEDGTVVAVNVLSVESKQGETEFMSEVASMANINICHENLVKLHGGCIDGPSRILAPLQ  113 (174)
Q Consensus        34 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~avK~~~~~~~~~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~~~~~~~lv~~~  113 (174)
                      ++|++.+.||+|+||.||++... +..+|+|.+...  .....+.+|+.+++.++  ||||+++++.+..  ..++++  
T Consensus         8 ~~~~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~--~~~~~~~~E~~~l~~l~--hp~iv~~~~~~~~--~~~lv~--   78 (307)
T 2eva_A            8 KEIEVEEVVGRGAFGVVCKAKWR-AKDVAIKQIESE--SERKAFIVELRQLSRVN--HPNIVKLYGACLN--PVCLVM--   78 (307)
T ss_dssp             GGEEEEEEEECCSSSEEEEEEET-TEEEEEEECSST--THHHHHHHHHHHHHHCC--CTTBCCEEEBCTT--TTEEEE--
T ss_pred             hHeeeeeEeecCCCceEEEEEEC-CeeEEEEEecCh--hHHHHHHHHHHHHhcCC--CCCcCeEEEEEcC--CcEEEE--
Confidence            56888999999999999999875 778999998633  34567899999999999  9999999998863  466777  


Q ss_pred             hhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhc
Q 039630          114 ASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEE  169 (174)
Q Consensus       114 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~  169 (174)
                      ++.+++.+...+...             .....+++..++.++.|++.||+|||+.
T Consensus        79 e~~~~~~L~~~l~~~-------------~~~~~~~~~~~~~~~~qi~~~l~~LH~~  121 (307)
T 2eva_A           79 EYAEGGSLYNVLHGA-------------EPLPYYTAAHAMSWCLQCSQGVAYLHSM  121 (307)
T ss_dssp             ECCTTCBHHHHHHCS-------------SSEECCCHHHHHHHHHHHHHHHHHHHTC
T ss_pred             EcCCCCCHHHHHhcc-------------CCCCccCHHHHHHHHHHHHHHHHHHHhC
Confidence            777776666543211             1122467888899999999999999983

>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ...

Probab=99.56  E-value=1.8e-14  Score=106.76  Aligned_cols=115  Identities=17%  Similarity=0.177  Sum_probs=89.1

Q ss_pred             cCCeeecceecccCCeeEEEEE-EcCCCEEEEEEeeccC--ccchhHHHHHHHHHhcccccCCCeeeeecceecCC----
Q 039630           33 TNGFRTSNKIGEGGFGSVYKGR-LEDGTVVAVNVLSVES--KQGETEFMSEVASMANINICHENLVKLHGGCIDGP----  105 (174)
Q Consensus        33 ~~~~~~~~~lg~G~~g~V~~~~-~~~~~~~avK~~~~~~--~~~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~~~~----  105 (174)
                      .++|.+.+.||+|+||.||+|. ..++..||+|++....  ......+.+|+.+++.++  ||||+++++++...+    
T Consensus        24 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~--hpniv~~~~~~~~~~~~~~  101 (371)
T 2xrw_A           24 LKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVN--HKNIIGLLNVFTPQKSLEE  101 (371)
T ss_dssp             ETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECTTSSHHHHHHHHHHHHHHHHCC--CTTBCCEEEEECSCCSTTT
T ss_pred             hhheeEeeeeEecCCEEEEEEEECCCCceEEEEEeccccCChHHHHHHHHHHHHHHhcC--CCCccceEEeecccccccc
Confidence            4679999999999999999998 4568899999997542  233556889999999999  999999999987664    


Q ss_pred             --CcccchhhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhcc
Q 039630          106 --SRILAPLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEI  170 (174)
Q Consensus       106 --~~~lv~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  170 (174)
                        ..++++  ++.++. +...+                  ...+++..+..++.|++.||.|||++.
T Consensus       102 ~~~~~lv~--e~~~~~-l~~~~------------------~~~~~~~~~~~i~~qi~~al~~lH~~~  147 (371)
T 2xrw_A          102 FQDVYIVM--ELMDAN-LCQVI------------------QMELDHERMSYLLYQMLCGIKHLHSAG  147 (371)
T ss_dssp             CCEEEEEE--ECCSEE-HHHHH------------------HSCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             ccceEEEE--EcCCCC-HHHHH------------------hhccCHHHHHHHHHHHHHHHHHHHHCC
Confidence              346666  444432 22211                  013688888999999999999999864

>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A*

Probab=99.56  E-value=1.2e-14  Score=115.07  Aligned_cols=123  Identities=20%  Similarity=0.244  Sum_probs=94.9

Q ss_pred             hHHhhcCCeeecceecccCCeeEEEEEEc----CCCEEEEEEeeccC-ccchhHHHHHHHHHhcccccCCCeeeeeccee
Q 039630           28 ELKIATNGFRTSNKIGEGGFGSVYKGRLE----DGTVVAVNVLSVES-KQGETEFMSEVASMANINICHENLVKLHGGCI  102 (174)
Q Consensus        28 ~~~~~~~~~~~~~~lg~G~~g~V~~~~~~----~~~~~avK~~~~~~-~~~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~  102 (174)
                      .+....++|.+.+.||+|+||.||+|...    .+..+|+|.++... ......+.+|+.+++.++  ||||+++++++.
T Consensus       384 ~~~i~~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~--HpnIv~l~~~~~  461 (656)
T 2j0j_A          384 DYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFD--HPHIVKLIGVIT  461 (656)
T ss_dssp             GTBCCGGGEEEEEEEECCSSCCEEEEEECCSSSCCEEEEEEECSSTTCHHHHHHHHHHHHHHHHCC--CTTBCCEEEEEC
T ss_pred             ccccccccEEEeeEEeeCCCEEEEEEEEecCCCccEEEEEEEecccCCHHHHHHHHHHHHHHHhCC--CCCCCeEEEEEe
Confidence            44455577999999999999999999853    24579999987542 233567899999999999  999999999884


Q ss_pred             cCCCcccchhhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhcc
Q 039630          103 DGPSRILAPLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEI  170 (174)
Q Consensus       103 ~~~~~~lv~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  170 (174)
                       .+..++++  ++.+++.+...+.               .....+++..++.++.|++.||.|||++.
T Consensus       462 -~~~~~lv~--E~~~~g~L~~~l~---------------~~~~~l~~~~~~~i~~qi~~aL~~LH~~g  511 (656)
T 2j0j_A          462 -ENPVWIIM--ELCTLGELRSFLQ---------------VRKFSLDLASLILYAYQLSTALAYLESKR  511 (656)
T ss_dssp             -SSSCEEEE--ECCTTCBHHHHHH---------------HTTTTCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             -cCceEEEE--EcCCCCcHHHHHH---------------hccCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence             45667777  7777666665331               11234788999999999999999999864

>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7

Probab=99.56  E-value=1e-14  Score=106.31  Aligned_cols=118  Identities=23%  Similarity=0.349  Sum_probs=89.9

Q ss_pred             HHhhcCCeeecceecccCCeeEEEEEEcCCCEEEEEEeeccCccchhHHHHHHHHHhcccccCCCeeeeecceecC----
Q 039630           29 LKIATNGFRTSNKIGEGGFGSVYKGRLEDGTVVAVNVLSVESKQGETEFMSEVASMANINICHENLVKLHGGCIDG----  104 (174)
Q Consensus        29 ~~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~avK~~~~~~~~~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~~~----  104 (174)
                      .....++|++.+.||+|+||.||+|... +..||+|++...   .......|.+++......|+||+++++.+...    
T Consensus        32 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~---~~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~  107 (337)
T 3mdy_A           32 QRTIAKQIQMVKQIGKGRYGEVWMGKWR-GEKVAVKVFFTT---EEASWFRETEIYQTVLMRHENILGFIAADIKGTGSW  107 (337)
T ss_dssp             HTTHHHHCEEEEEEEEETTEEEEEEEET-TEEEEEEEEEGG---GHHHHHHHHHHHTSTTCCCTTBCCEEEEEEESCGGG
T ss_pred             ccccccceEEEeEeecCCCeEEEEEEEC-CceEEEEEEecc---ccchhhhHHHHHHHHhhcCCCeeeEEEEEccCCCCC
Confidence            3344567999999999999999999875 889999999633   33445566666665522399999999998877    


Q ss_pred             CCcccchhhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhc
Q 039630          105 PSRILAPLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEE  169 (174)
Q Consensus       105 ~~~~lv~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~  169 (174)
                      ...++++  ++.+++.|...+.                 ...+++..++.++.|++.||.|||++
T Consensus       108 ~~~~lv~--e~~~~g~L~~~l~-----------------~~~~~~~~~~~i~~~i~~~l~~lH~~  153 (337)
T 3mdy_A          108 TQLYLIT--DYHENGSLYDYLK-----------------STTLDAKSMLKLAYSSVSGLCHLHTE  153 (337)
T ss_dssp             CEEEEEE--CCCTTCBHHHHHH-----------------HCCBCHHHHHHHHHHHHHHHHHHHSC
T ss_pred             CceEEEE--eccCCCcHHHHhh-----------------ccCCCHHHHHHHHHHHHHHHHHHHHh
Confidence            5566777  6666666655331                 12478899999999999999999986

>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}

Probab=99.55  E-value=7.5e-15  Score=116.64  Aligned_cols=116  Identities=17%  Similarity=0.198  Sum_probs=90.0

Q ss_pred             cCCeeecceecccCCeeEEEEEEc--CCCEEEEEEeeccC-ccchhHHHHHHHHHhcccccCCCeeeeecceecCCC---
Q 039630           33 TNGFRTSNKIGEGGFGSVYKGRLE--DGTVVAVNVLSVES-KQGETEFMSEVASMANINICHENLVKLHGGCIDGPS---  106 (174)
Q Consensus        33 ~~~~~~~~~lg~G~~g~V~~~~~~--~~~~~avK~~~~~~-~~~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~~~~~---  106 (174)
                      .++|++.+.||+|+||.||++...  +++.||+|++.... ......+.+|+.++..++  ||||+++++++...+.   
T Consensus        79 ~~~y~i~~~lg~G~~g~Vy~a~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~--hp~iv~~~~~~~~~~~~~~  156 (681)
T 2pzi_A           79 AGQYEVKGCIAHGGLGWIYLALDRNVNGRPVVLKGLVHSGDAEAQAMAMAERQFLAEVV--HPSIVQIFNFVEHTDRHGD  156 (681)
T ss_dssp             TTTEEEEEEEEEETTEEEEEEEEGGGTTEEEEEEESCSSCCHHHHHHHHHHHGGGGGCC--CTTBCCEEEEEEEECTTSC
T ss_pred             CCceEEEEEEeeCCCeEEEEEEEcCCCCcEEEEEEeCccCCHHHHHHHHHHHHHHHhcC--CCCcCeEeeeEeecCCCCC
Confidence            468999999999999999999953  58899999986442 334556889999999999  9999999999987655   


Q ss_pred             --cccchhhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhcc
Q 039630          107 --RILAPLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEI  170 (174)
Q Consensus       107 --~~lv~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  170 (174)
                        .++|+  ++.+++.+..          .        ....+++..++.++.||+.||.|||++.
T Consensus       157 ~~~~lv~--E~~~g~~L~~----------~--------~~~~l~~~~~~~~~~qi~~aL~~lH~~g  202 (681)
T 2pzi_A          157 PVGYIVM--EYVGGQSLKR----------S--------KGQKLPVAEAIAYLLEILPALSYLHSIG  202 (681)
T ss_dssp             EEEEEEE--ECCCCEECC----------------------CCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             ceeEEEE--EeCCCCcHHH----------H--------HhCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence              45555  5444444322          1        0115889999999999999999999863

>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A*

Probab=99.55  E-value=1.9e-14  Score=108.62  Aligned_cols=119  Identities=18%  Similarity=0.202  Sum_probs=89.3

Q ss_pred             cCCeeecceecccCCeeEEEEE-EcCCCEEEEEEeeccCccchhHHHHHHHHHhcccc----cCCCeeeeecceecCCCc
Q 039630           33 TNGFRTSNKIGEGGFGSVYKGR-LEDGTVVAVNVLSVESKQGETEFMSEVASMANINI----CHENLVKLHGGCIDGPSR  107 (174)
Q Consensus        33 ~~~~~~~~~lg~G~~g~V~~~~-~~~~~~~avK~~~~~~~~~~~~~~~e~~~l~~l~~----~h~~i~~~~~~~~~~~~~  107 (174)
                      ..+|++.+.||+|+||.||+|. ..+++.||+|+++.. ......+..|+.++..+..    .|+||+++++.+...+..
T Consensus        96 ~~ry~~~~~LG~G~fg~V~~a~~~~~~~~vAvK~~~~~-~~~~~~~~~E~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~~  174 (429)
T 3kvw_A           96 AYRYEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNE-KRFHRQAAEEIRILEHLRKQDKDNTMNVIHMLENFTFRNHI  174 (429)
T ss_dssp             TTTEEEEEEEEESSSEEEEEEEETTTTEEEEEEEECSC-HHHHHHHHHHHHHHHHHHTTCTTSCSCBCCEEEEEEETTEE
T ss_pred             cCcEEEEEEcccCccEEEEEEEECCCCcEEEEEEECCc-cchHHHHHHHHHHHHHHhhccccCCcCEEEEEeecccCCeE
Confidence            3569999999999999999998 456889999999743 2334567778888877630    267999999999988888


Q ss_pred             ccchhhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhc
Q 039630          108 ILAPLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEE  169 (174)
Q Consensus       108 ~lv~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~  169 (174)
                      ++++  ++... .+...+..              .....+++..+..++.|++.||+|||++
T Consensus       175 ~lv~--e~~~~-~L~~~l~~--------------~~~~~~~~~~~~~i~~qi~~aL~~LH~~  219 (429)
T 3kvw_A          175 CMTF--ELLSM-NLYELIKK--------------NKFQGFSLPLVRKFAHSILQCLDALHKN  219 (429)
T ss_dssp             EEEE--CCCCC-BHHHHHHH--------------TTTCCCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred             EEEE--eccCC-CHHHHHHh--------------ccCCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence            8888  54432 33332211              1122478899999999999999999975

>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A*

Probab=99.55  E-value=3.6e-14  Score=103.74  Aligned_cols=116  Identities=26%  Similarity=0.350  Sum_probs=91.2

Q ss_pred             HhhcCCeeecceecccCCeeEEEEEEcCCCEEEEEEeeccCccchhHHHHHHHHHhcccccCCCeeeeecceecCC----
Q 039630           30 KIATNGFRTSNKIGEGGFGSVYKGRLEDGTVVAVNVLSVESKQGETEFMSEVASMANINICHENLVKLHGGCIDGP----  105 (174)
Q Consensus        30 ~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~avK~~~~~~~~~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~~~~----  105 (174)
                      ....++|.+.+.||+|+||.||++.. +++.||+|++..   .....+.+|+.++..+.+.|+||+++++.+...+    
T Consensus        38 ~~~~~~y~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~---~~~~~~~~e~~~~~~~~l~h~ni~~~~~~~~~~~~~~~  113 (342)
T 1b6c_B           38 RTIARTIVLQESIGKGRFGEVWRGKW-RGEEVAVKIFSS---REERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWT  113 (342)
T ss_dssp             HHHHHHCEEEEEEEEETTEEEEEEEE-TTEEEEEEEECG---GGHHHHHHHHHHHHHSCCCCTTBCCEEEEEECCCSSCC
T ss_pred             ccccccEEEEeeecCCCCcEEEEEEE-cCccEEEEEeCc---hhHHHHHHHHHHHHHhhcCCCcEEEEEeeecccCCccc
Confidence            34456799999999999999999987 488999999963   3445678888888873223999999999998876    


Q ss_pred             CcccchhhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhh
Q 039630          106 SRILAPLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHE  168 (174)
Q Consensus       106 ~~~lv~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~  168 (174)
                      ..++++  ++.+++.|...+.                 ...+++..++.++.|++.||.|||.
T Consensus       114 ~~~lv~--e~~~~g~L~~~l~-----------------~~~~~~~~~~~i~~~i~~~l~~lH~  157 (342)
T 1b6c_B          114 QLWLVS--DYHEHGSLFDYLN-----------------RYTVTVEGMIKLALSTASGLAHLHM  157 (342)
T ss_dssp             CEEEEE--CCCTTCBHHHHHH-----------------HCCBCHHHHHHHHHHHHHHHHHHHC
T ss_pred             eeEEEE--eecCCCcHHHHHh-----------------ccCccHHHHHHHHHHHHHHHHHHHH
Confidence            567777  7776666655331                 1247889999999999999999994

>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A*

Probab=99.55  E-value=1.7e-14  Score=103.53  Aligned_cols=118  Identities=18%  Similarity=0.187  Sum_probs=92.9

Q ss_pred             hcCCeeecceecccCCeeEEEEE-EcCCCEEEEEEeeccCccchhHHHHHHHHHhcccccCCCeeeeecceecCCCcccc
Q 039630           32 ATNGFRTSNKIGEGGFGSVYKGR-LEDGTVVAVNVLSVESKQGETEFMSEVASMANINICHENLVKLHGGCIDGPSRILA  110 (174)
Q Consensus        32 ~~~~~~~~~~lg~G~~g~V~~~~-~~~~~~~avK~~~~~~~~~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~~~~~~~lv  110 (174)
                      ..++|.+.+.||+|+||.||+|. ..++..||+|+++..  .....+.+|+.++..+. .|++++++++.+......+++
T Consensus         8 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~--~~~~~~~~e~~~~~~l~-~~~~i~~~~~~~~~~~~~~lv   84 (298)
T 1csn_A            8 VGVHYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRR--SDAPQLRDEYRTYKLLA-GCTGIPNVYYFGQEGLHNVLV   84 (298)
T ss_dssp             ETTTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEECC--TTSCCHHHHHHHHHHTT-TCTTCCCEEEEEEETTEEEEE
T ss_pred             cccceEEEEEEeecCCEEEEEEEECCCCcEEEEEEeccC--CccHHHHHHHHHHHHHh-cCCCCCeEEeecCCCceeEEE
Confidence            34679999999999999999999 467899999998644  23346788999999983 399999999999888888888


Q ss_pred             hhhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhcc
Q 039630          111 PLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEI  170 (174)
Q Consensus       111 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  170 (174)
                      +  ++. ++.|...+.               .....+++..+..++.|++.||.|||++.
T Consensus        85 ~--e~~-~~~L~~~l~---------------~~~~~~~~~~~~~i~~qi~~~l~~lH~~~  126 (298)
T 1csn_A           85 I--DLL-GPSLEDLLD---------------LCGRKFSVKTVAMAAKQMLARVQSIHEKS  126 (298)
T ss_dssp             E--ECC-CCBHHHHHH---------------HTTTCCCHHHHHHHHHHHHHHHHHHHTTT
T ss_pred             E--Eec-CCCHHHHHH---------------HhccCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            8  555 444444321               11224789999999999999999999863

>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B*

Probab=99.55  E-value=8.1e-15  Score=104.44  Aligned_cols=115  Identities=23%  Similarity=0.355  Sum_probs=87.8

Q ss_pred             CCeeecceecccCCeeEEEEEE-cCCCEEEEEEeeccCccchhHHHHHHHHHhcccccCCCeeeeecceec---------
Q 039630           34 NGFRTSNKIGEGGFGSVYKGRL-EDGTVVAVNVLSVESKQGETEFMSEVASMANINICHENLVKLHGGCID---------  103 (174)
Q Consensus        34 ~~~~~~~~lg~G~~g~V~~~~~-~~~~~~avK~~~~~~~~~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~~---------  103 (174)
                      ++|+..+.||+|+||.||++.. .+++.+|+|.++...    ..+.+|+.++..++  ||||+++++++..         
T Consensus        11 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~----~~~~~e~~~l~~l~--h~~i~~~~~~~~~~~~~~~~~~   84 (284)
T 2a19_B           11 MDFKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNN----EKAEREVKALAKLD--HVNIVHYNGCWDGFDYDPETSS   84 (284)
T ss_dssp             HHEEEEEEEECSSSCCEEEEEETTTCCEEEEEEEECCS----GGGHHHHHHHHHCC--CTTBCCEEEEEEEEEEC-----
T ss_pred             cccceeeeeccCCceEEEEEEEcCCCeEEEEEEecccc----HHHHHHHHHHHhCC--CCCEEEEeeeEeccccCccccc
Confidence            4689999999999999999995 478999999997442    35678999999999  9999999998754         


Q ss_pred             -------CCCcccchhhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhcc
Q 039630          104 -------GPSRILAPLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEI  170 (174)
Q Consensus       104 -------~~~~~lv~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  170 (174)
                             ....++++  ++.+++.+...+..              .....+++..+..++.|++.||.|||++.
T Consensus        85 ~~~~~~~~~~~~lv~--e~~~~~~L~~~l~~--------------~~~~~~~~~~~~~i~~qi~~~l~~lH~~~  142 (284)
T 2a19_B           85 KNSSRSKTKCLFIQM--EFCDKGTLEQWIEK--------------RRGEKLDKVLALELFEQITKGVDYIHSKK  142 (284)
T ss_dssp             ----CCEEEEEEEEE--CCCCSCBHHHHHHH--------------GGGSCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             ccccccCcceEEEEE--eccCCCCHHHHHhh--------------ccCCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence                   22245555  55555555443211              11235788999999999999999999853

>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B*

Probab=99.54  E-value=1.1e-14  Score=104.19  Aligned_cols=118  Identities=26%  Similarity=0.463  Sum_probs=84.2

Q ss_pred             cCCeeecceecccCCeeEEEEEEc--CCC--EEEEEEeeccC---ccchhHHHHHHHHHhcccccCCCeeeeecceecCC
Q 039630           33 TNGFRTSNKIGEGGFGSVYKGRLE--DGT--VVAVNVLSVES---KQGETEFMSEVASMANINICHENLVKLHGGCIDGP  105 (174)
Q Consensus        33 ~~~~~~~~~lg~G~~g~V~~~~~~--~~~--~~avK~~~~~~---~~~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~~~~  105 (174)
                      .++|++.+.||+|+||.||++...  ++.  .||+|+++...   ......+.+|+.++..++  |+||+++++++...+
T Consensus        17 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~--h~~i~~~~~~~~~~~   94 (291)
T 1u46_A           17 EKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLD--HRNLIRLYGVVLTPP   94 (291)
T ss_dssp             GGGEEEEEECC----CCCEEEEEECTTSCEEEEEEEC--------CHHHHHHHHHHHHHHHCC--CTTBCCEEEEECSSS
T ss_pred             hhHeeeeeeecCCCceeEEEEEeccCCCceeEEEEEEEccCccCCHHHHHHHHHHHHHHHhCC--CCCcccEEEEEccCC
Confidence            357999999999999999999842  233  68999987542   234567899999999999  999999999997754


Q ss_pred             CcccchhhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhcc
Q 039630          106 SRILAPLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEI  170 (174)
Q Consensus       106 ~~~lv~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  170 (174)
                       .++++  ++..++.+...+..               ....+++..+..++.|++.||.|||++.
T Consensus        95 -~~~v~--e~~~~~~L~~~l~~---------------~~~~~~~~~~~~~~~~i~~~l~~lH~~~  141 (291)
T 1u46_A           95 -MKMVT--ELAPLGSLLDRLRK---------------HQGHFLLGTLSRYAVQVAEGMGYLESKR  141 (291)
T ss_dssp             -CEEEE--ECCTTCBHHHHHHH---------------HGGGSCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             -ceeeE--ecccCCCHHHHHHh---------------ccCCcCHHHHHHHHHHHHHHHHHHHhCC
Confidence             56666  66666666553311               1234788999999999999999999863

>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ...

Probab=99.54  E-value=9.6e-15  Score=109.98  Aligned_cols=112  Identities=22%  Similarity=0.330  Sum_probs=82.3

Q ss_pred             CeeecceecccCCeeEEEEEE-cCCCEEEEEEeeccCccchhHHHHHHHHHhcccccCCCeeeeecceecC----CC--c
Q 039630           35 GFRTSNKIGEGGFGSVYKGRL-EDGTVVAVNVLSVESKQGETEFMSEVASMANINICHENLVKLHGGCIDG----PS--R  107 (174)
Q Consensus        35 ~~~~~~~lg~G~~g~V~~~~~-~~~~~~avK~~~~~~~~~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~~~----~~--~  107 (174)
                      .|...+.||+|+||.||+|.. .++..||+|.+....    ....+|+.+++.++  |+||+++++++...    +.  .
T Consensus        55 ~y~~~~~lG~G~fg~Vy~~~~~~~~~~vaiK~~~~~~----~~~~~E~~il~~l~--hpniv~l~~~~~~~~~~~~~~~~  128 (420)
T 1j1b_A           55 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDK----RFKNRELQIMRKLD--HCNIVRLRYFFYSSGEKKDEVYL  128 (420)
T ss_dssp             EEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECCT----TSCCHHHHHHHTCC--CTTBCCEEEEEEEEETTTTEEEE
T ss_pred             eEEeeeEEeeCCCEEEEEEEECCCCcEEEEEEecccc----hhHHHHHHHHHHcC--CCCccceeeEEeccCCCCcceeE
Confidence            589999999999999999995 568999999996432    22347999999999  99999999988542    22  3


Q ss_pred             ccchhhhhhhhhhh--hhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhc
Q 039630          108 ILAPLQASIEALFL--FTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEE  169 (174)
Q Consensus       108 ~lv~~~~~~~~~~l--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~  169 (174)
                      ++++  ++.+....  ...+               ......+++..+..++.||+.||.|||++
T Consensus       129 ~lv~--e~~~~~l~~~~~~~---------------~~~~~~l~~~~~~~~~~qi~~aL~~LH~~  175 (420)
T 1j1b_A          129 NLVL--DYVPETVYRVARHY---------------SRAKQTLPVIYVKLYMYQLFRSLAYIHSF  175 (420)
T ss_dssp             EEEE--ECCCEEHHHHHHHH---------------HHTTCCCCHHHHHHHHHHHHHHHHHHHTT
T ss_pred             Eeeh--hcccccHHHHHHHH---------------hhccCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence            3455  44443211  1111               11223578899999999999999999985

>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C

Probab=99.54  E-value=1.5e-14  Score=108.36  Aligned_cols=114  Identities=15%  Similarity=0.183  Sum_probs=85.1

Q ss_pred             CCeeec-ceecccCCeeEEEEE-EcCCCEEEEEEeeccCccchhHHHHHHHHHhcccccCCCeeeeecceec----CCCc
Q 039630           34 NGFRTS-NKIGEGGFGSVYKGR-LEDGTVVAVNVLSVESKQGETEFMSEVASMANINICHENLVKLHGGCID----GPSR  107 (174)
Q Consensus        34 ~~~~~~-~~lg~G~~g~V~~~~-~~~~~~~avK~~~~~~~~~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~~----~~~~  107 (174)
                      ++|... +.||+|+||.||++. ..++..||+|+++.     ...+.+|+.++.++. .|+||+++++++..    ....
T Consensus        61 ~~y~~~~~~LG~G~~g~V~~~~~~~~~~~vAiK~~~~-----~~~~~~E~~~~~~~~-~hp~iv~l~~~~~~~~~~~~~~  134 (400)
T 1nxk_A           61 DDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQD-----CPKARREVELHWRAS-QCPHIVRIVDVYENLYAGRKCL  134 (400)
T ss_dssp             GTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEC-----SHHHHHHHHHHHHHT-TSTTBCCEEEEEEEEETTEEEE
T ss_pred             ccceeccceeeeccCeEEEEEEECCCCCEEEEEEeCc-----chhHHHHHHHHHHhc-CCCCcceEeEEEeecccCCcEE
Confidence            456665 689999999999998 45789999999963     235678888775542 39999999998865    3445


Q ss_pred             ccchhhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhc
Q 039630          108 ILAPLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEE  169 (174)
Q Consensus       108 ~lv~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~  169 (174)
                      ++|+  ++.+++.|...+..              .....+++..+..++.||+.||.|||++
T Consensus       135 ~lv~--E~~~gg~L~~~l~~--------------~~~~~l~~~~~~~i~~qi~~aL~~LH~~  180 (400)
T 1nxk_A          135 LIVM--ECLDGGELFSRIQD--------------RGDQAFTEREASEIMKSIGEAIQYLHSI  180 (400)
T ss_dssp             EEEE--ECCCSEEHHHHHHC--------------C---CCBHHHHHHHHHHHHHHHHHHHHT
T ss_pred             EEEE--EeCCCCcHHHHHHH--------------hCCCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence            6666  77777666654321              1123478999999999999999999975

>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A*

Probab=99.54  E-value=1.9e-14  Score=107.07  Aligned_cols=119  Identities=18%  Similarity=0.290  Sum_probs=88.6

Q ss_pred             cCCeeecceecccCCeeEEEEE-EcCCCEEEEEEeeccCccchhHHHHHHHHHhcccc------cCCCeeeeeccee---
Q 039630           33 TNGFRTSNKIGEGGFGSVYKGR-LEDGTVVAVNVLSVESKQGETEFMSEVASMANINI------CHENLVKLHGGCI---  102 (174)
Q Consensus        33 ~~~~~~~~~lg~G~~g~V~~~~-~~~~~~~avK~~~~~~~~~~~~~~~e~~~l~~l~~------~h~~i~~~~~~~~---  102 (174)
                      .++|++.+.||+|+||.||++. ..+++.||+|+++.. ......+.+|+.+++.+..      .|+||+++++.+.   
T Consensus        36 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~-~~~~~~~~~E~~~l~~l~~~~~~~~~~~~iv~~~~~~~~~~  114 (397)
T 1wak_A           36 NGRYHVIRKLGWGHFSTVWLSWDIQGKKFVAMKVVKSA-EHYTETALDEIRLLKSVRNSDPNDPNREMVVQLLDDFKISG  114 (397)
T ss_dssp             TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSC-HHHHHHHHHHHHHHHHHHHSCTTCGGGGGBCCEEEEEEEEE
T ss_pred             CCeEEEEEEeeecCCeeEEEEEecCCCeEEEEEEEecC-CcchHHHHHHHHHHHHHhhcCCCCCCcceeeeeecceeecC
Confidence            4679999999999999999998 567889999999743 3345678899999988741      1677999999887   


Q ss_pred             -cCCCcccchhhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhc
Q 039630          103 -DGPSRILAPLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEE  169 (174)
Q Consensus       103 -~~~~~~lv~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~  169 (174)
                       .....++++  ++... .+...+..              .....+++..+..++.|++.||.|||++
T Consensus       115 ~~~~~~~lv~--e~~~~-~l~~~~~~--------------~~~~~~~~~~~~~i~~qi~~aL~~lH~~  165 (397)
T 1wak_A          115 VNGTHICMVF--EVLGH-HLLKWIIK--------------SNYQGLPLPCVKKIIQQVLQGLDYLHTK  165 (397)
T ss_dssp             TTEEEEEEEE--CCCCC-BHHHHHHH--------------TTTSCCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             CCCceEEEEE--eccCc-cHHHHHHh--------------cccCCCCHHHHHHHHHHHHHHHHHHHHh
Confidence             444566666  44432 22222211              1123478999999999999999999986

>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A

Probab=99.53  E-value=2.5e-15  Score=111.55  Aligned_cols=124  Identities=17%  Similarity=0.113  Sum_probs=83.2

Q ss_pred             cCCeeecceecccCCeeEEEEE-EcCCCEEEEEEeecc---CccchhHHHHHHH---HHhcccccCCCeeeeec------
Q 039630           33 TNGFRTSNKIGEGGFGSVYKGR-LEDGTVVAVNVLSVE---SKQGETEFMSEVA---SMANINICHENLVKLHG------   99 (174)
Q Consensus        33 ~~~~~~~~~lg~G~~g~V~~~~-~~~~~~~avK~~~~~---~~~~~~~~~~e~~---~l~~l~~~h~~i~~~~~------   99 (174)
                      .++|.+.+.||+|+||.||+|. ..+++.||+|+++..   .....+.+.+|+.   ++++++  ||||+++++      
T Consensus        72 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~--hpniv~~~~~~~~~~  149 (377)
T 3byv_A           72 PRTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIK--NQKQAKVHLRFIFPF  149 (377)
T ss_dssp             CEEEEEEEEEEEETTEEEEEEEC-CCCCEEEEEEEEECC-CCTTHHHHHHHHHHGGGGSTTCC--SHHHHHHHHCBCCCS
T ss_pred             CceEEEcceeecCCCEEEEEEEECCCCcEEEEEEEeeccccchHHHHHHHHHHHHHHhccccC--CHHHHHHHhhhhhhh
Confidence            3568889999999999999999 567999999999744   2334567889995   455557  999999984      


Q ss_pred             -ceecCCC-----------------cccchhhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHH
Q 039630          100 -GCIDGPS-----------------RILAPLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIAR  161 (174)
Q Consensus       100 -~~~~~~~-----------------~~lv~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~  161 (174)
                       ++...+.                 .++++  ++.+ +.|...+...+.         .......+++..+..++.|++.
T Consensus       150 ~~~~~~~~~~~~~~~~~~~~~~i~~~~lv~--E~~~-g~L~~~l~~~~~---------~~~~~~~l~~~~~~~i~~qi~~  217 (377)
T 3byv_A          150 DLVKDPQKKKMIRVRLDERDMWVLSRFFLY--PRMQ-SNLQTFGEVLLS---------HSSTHKSLVHHARLQLTLQVIR  217 (377)
T ss_dssp             EEEECTTSCSEEEC------CEEESEEEEE--ECCS-EEHHHHHHHHHH---------TTTTTHHHHHHHHHHHHHHHHH
T ss_pred             hhhhccCCccccccccCCCceEEEEEEEEE--eccC-CCHHHHHHhccc---------cccccccccHHHHHHHHHHHHH
Confidence             4333321                 44555  4442 344433221100         0111223456788889999999


Q ss_pred             HHHHhhhcc
Q 039630          162 GLAYIHEEI  170 (174)
Q Consensus       162 gl~yLH~~~  170 (174)
                      ||+|||++.
T Consensus       218 aL~~LH~~~  226 (377)
T 3byv_A          218 LLASLHHYG  226 (377)
T ss_dssp             HHHHHHHTT
T ss_pred             HHHHHHhCC
Confidence            999999863

>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens}

Probab=99.53  E-value=1.2e-14  Score=105.10  Aligned_cols=123  Identities=19%  Similarity=0.289  Sum_probs=83.4

Q ss_pred             hhHHhhcCCeeecceecccCCeeEEEEEE-cCCCEEEEEEeeccCc-cchhH-HHHHHHHHhcccccCCCeeeeecceec
Q 039630           27 NELKIATNGFRTSNKIGEGGFGSVYKGRL-EDGTVVAVNVLSVESK-QGETE-FMSEVASMANINICHENLVKLHGGCID  103 (174)
Q Consensus        27 ~~~~~~~~~~~~~~~lg~G~~g~V~~~~~-~~~~~~avK~~~~~~~-~~~~~-~~~e~~~l~~l~~~h~~i~~~~~~~~~  103 (174)
                      ..+....++|+..+.||+|+||.||++.. .++..||+|++..... ..... +..+..+++.++  |+||+++++++..
T Consensus        18 ~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~--h~~i~~~~~~~~~   95 (318)
T 2dyl_A           18 QRYQAEINDLENLGEMGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKEENKRILMDLDVVLKSHD--CPYIVQCFGTFIT   95 (318)
T ss_dssp             SEEECCGGGEEEEEEC------CEEEEEETTTCCEEEEEEEETTSCHHHHHHHHHHHHHHHHTTT--CTTBCCEEEEEEC
T ss_pred             hhhhhhhccccccceeeecCCeeEEEEEEecCCeEEEEEEecccccchHHHHHHHHHHHHHHhcC--CCceeeEEEEEec
Confidence            33444456799999999999999999994 5789999999975532 22223 333445677777  9999999999999


Q ss_pred             CCCcccchhhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhc
Q 039630          104 GPSRILAPLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEE  169 (174)
Q Consensus       104 ~~~~~lv~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~  169 (174)
                      .+..++++  ++.+...  ..+..              .....+++..+..++.|++.||.|||++
T Consensus        96 ~~~~~lv~--e~~~~~~--~~l~~--------------~~~~~~~~~~~~~~~~~i~~~l~~lH~~  143 (318)
T 2dyl_A           96 NTDVFIAM--ELMGTCA--EKLKK--------------RMQGPIPERILGKMTVAIVKALYYLKEK  143 (318)
T ss_dssp             SSEEEEEE--CCCSEEH--HHHHH--------------HHTSCCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CCcEEEEE--eccCCcH--HHHHH--------------HhccCCCHHHHHHHHHHHHHHHHHHHhh
Confidence            88888888  5442221  11110              1123478899999999999999999984

>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ...

Probab=99.53  E-value=6.8e-15  Score=106.94  Aligned_cols=126  Identities=20%  Similarity=0.215  Sum_probs=94.0

Q ss_pred             hhHHhhcCCeeecceecccCCeeEEEEE-EcCCCEEEEEEeeccCcc------chhHHHHHHHHHhcccccCCCeeeeec
Q 039630           27 NELKIATNGFRTSNKIGEGGFGSVYKGR-LEDGTVVAVNVLSVESKQ------GETEFMSEVASMANINICHENLVKLHG   99 (174)
Q Consensus        27 ~~~~~~~~~~~~~~~lg~G~~g~V~~~~-~~~~~~~avK~~~~~~~~------~~~~~~~e~~~l~~l~~~h~~i~~~~~   99 (174)
                      .......++|++.+.||+|+||.||+|. ..++..||+|+++.....      ....+.+|+.+++.+...|+|++++++
T Consensus        36 ~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~i~~~~~  115 (320)
T 3a99_A           36 KEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLD  115 (320)
T ss_dssp             ----CCTTTEEEEEECSSSSSCEEEEEEETTTTEEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSSSCSBCCEEE
T ss_pred             cccCCccCceEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEecccchhhhhhhhhhHHHHHHHHHHhhccCCCCceEEEE
Confidence            3444556789999999999999999998 567889999999755221      234577899999998622699999999


Q ss_pred             ceecCCCcccchhhhhhhh-hhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhcc
Q 039630          100 GCIDGPSRILAPLQASIEA-LFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEI  170 (174)
Q Consensus       100 ~~~~~~~~~lv~~~~~~~~-~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  170 (174)
                      .+...+..++++  ++... +.+...+.                ....+++..+..++.|++.||.|||++.
T Consensus       116 ~~~~~~~~~lv~--e~~~~~~~L~~~l~----------------~~~~l~~~~~~~i~~qi~~~L~~LH~~~  169 (320)
T 3a99_A          116 WFERPDSFVLIL--ERPEPVQDLFDFIT----------------ERGALQEELARSFFWQVLEAVRHCHNCG  169 (320)
T ss_dssp             EEECSSEEEEEE--ECCSSEEEHHHHHH----------------HHCSCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             EEecCCcEEEEE--EcCCCCccHHHHHh----------------ccCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            999988888887  55443 34433221                1234788899999999999999999753

>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens}

Probab=99.53  E-value=5.4e-14  Score=101.51  Aligned_cols=121  Identities=25%  Similarity=0.355  Sum_probs=86.0

Q ss_pred             cCCeeecceecccCCeeEEEEE-EcCCCEEEEEEeeccC-----ccchhHHHHHHHHHhccc-ccCCCeeeeecceecCC
Q 039630           33 TNGFRTSNKIGEGGFGSVYKGR-LEDGTVVAVNVLSVES-----KQGETEFMSEVASMANIN-ICHENLVKLHGGCIDGP  105 (174)
Q Consensus        33 ~~~~~~~~~lg~G~~g~V~~~~-~~~~~~~avK~~~~~~-----~~~~~~~~~e~~~l~~l~-~~h~~i~~~~~~~~~~~  105 (174)
                      .++|++.+.||+|+||.||++. ..+++.||+|+++...     ......+.+|+.+++.+. ..|+||+++++.+....
T Consensus         8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~niv~~~~~~~~~~   87 (308)
T 3g33_A            8 TSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRLEAFEHPNVVRLMDVCATSR   87 (308)
T ss_dssp             --CCEEEEEECCSSSCCEEEEECTTTCCEEEEEEEEEECCCTTSSCCCHHHHHHHHHHHHHHHHCCTTBCCEEEEEEECC
T ss_pred             ccceEEEEEEecCCCeEEEEEEECCCCcEEEEEEEecccccccccccchhHHHHHHHHHHHhhcCCCCeEEeeeeeeccC
Confidence            4689999999999999999999 5678999999997442     122345667777766542 12999999999997765


Q ss_pred             C-----cccchhhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhcc
Q 039630          106 S-----RILAPLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEI  170 (174)
Q Consensus       106 ~-----~~lv~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  170 (174)
                      .     .++++  ++.++ .+...+.              ......+++..+..++.|++.||+|||++.
T Consensus        88 ~~~~~~~~lv~--e~~~~-~L~~~~~--------------~~~~~~~~~~~~~~i~~qi~~al~~lH~~~  140 (308)
T 3g33_A           88 TDREIKVTLVF--EHVDQ-DLRTYLD--------------KAPPPGLPAETIKDLMRQFLRGLDFLHANC  140 (308)
T ss_dssp             SSSEEEEEEEE--ECCCC-BHHHHHH--------------TCCTTCSCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             CCCceeEEEEe--hhhhc-CHHHHHh--------------hccCCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            3     45555  44442 3333221              111223789999999999999999999864

>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B

Probab=99.53  E-value=2.3e-14  Score=104.08  Aligned_cols=120  Identities=25%  Similarity=0.384  Sum_probs=88.1

Q ss_pred             hcCCeeecceecccCCeeEEEEEE--cCCCEEEEEEeeccC--ccchhHHHHHHHHHhcc---cccCCCeeeeeccee--
Q 039630           32 ATNGFRTSNKIGEGGFGSVYKGRL--EDGTVVAVNVLSVES--KQGETEFMSEVASMANI---NICHENLVKLHGGCI--  102 (174)
Q Consensus        32 ~~~~~~~~~~lg~G~~g~V~~~~~--~~~~~~avK~~~~~~--~~~~~~~~~e~~~l~~l---~~~h~~i~~~~~~~~--  102 (174)
                      ..++|++.+.||+|+||.||++..  .++..||+|+++...  ......+.+|+.+++.+   .  ||||+++++++.  
T Consensus         9 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~--h~~i~~~~~~~~~~   86 (326)
T 1blx_A            9 ADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFE--HPNVVRLFDVCTVS   86 (326)
T ss_dssp             GGGTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEEEEEBCTTSCBCTHHHHHHHHHHHHHTC--CTTBCCEEEEEEEE
T ss_pred             chhceeeeeeecccccEEEEEEEecCCCCEEEEEEEeccCcccccCCchhhHHHHHHHhhhccC--CCCeEeeeeeeeec
Confidence            446799999999999999999995  467899999997542  22334567788877766   7  999999999986  


Q ss_pred             ---cCCCcccchhhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhcc
Q 039630          103 ---DGPSRILAPLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEI  170 (174)
Q Consensus       103 ---~~~~~~lv~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  170 (174)
                         .....++++  ++.+ +.+...+..              .....+++..+..++.|++.||.|||++.
T Consensus        87 ~~~~~~~~~lv~--e~~~-~~L~~~l~~--------------~~~~~~~~~~~~~~~~qi~~~l~~lH~~g  140 (326)
T 1blx_A           87 RTDRETKLTLVF--EHVD-QDLTTYLDK--------------VPEPGVPTETIKDMMFQLLRGLDFLHSHR  140 (326)
T ss_dssp             ECSSEEEEEEEE--ECCS-CBHHHHHHH--------------SCTTCSCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             ccCCCceEEEEE--ecCC-CCHHHHHHh--------------cccCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence               344556666  5444 233332211              11224788999999999999999999864

>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens}

Probab=99.53  E-value=2.4e-14  Score=107.28  Aligned_cols=122  Identities=20%  Similarity=0.264  Sum_probs=79.5

Q ss_pred             Ceee-cceecccCCeeEEEEEEc---CCCEEEEEEeeccCccchhHHHHHHHHHhcccccCCCeeeeecceec--CCCcc
Q 039630           35 GFRT-SNKIGEGGFGSVYKGRLE---DGTVVAVNVLSVESKQGETEFMSEVASMANINICHENLVKLHGGCID--GPSRI  108 (174)
Q Consensus        35 ~~~~-~~~lg~G~~g~V~~~~~~---~~~~~avK~~~~~~~~~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~~--~~~~~  108 (174)
                      .|.. .++||+|+||.||+|...   ++..||+|+++..  .....+.+|+.+++.++  |+||+++++++..  ....+
T Consensus        21 ~y~~~g~~lG~G~~g~Vy~~~~~~~~~~~~vaiK~~~~~--~~~~~~~~E~~~l~~l~--hpniv~~~~~~~~~~~~~~~   96 (405)
T 3rgf_A           21 LFEYEGCKVGRGTYGHVYKAKRKDGKDDKDYALKQIEGT--GISMSACREIALLRELK--HPNVISLQKVFLSHADRKVW   96 (405)
T ss_dssp             HEECSSCCCC-----EEEEEEESSSSCCCCEEEEECSSS--SCCHHHHHHHHHHHHCC--CTTBCCCCEEEEETTTTEEE
T ss_pred             hhhhcCcEeeecCCeEEEEEEEccCCCCeEEEEEEECCC--CCCHHHHHHHHHHHhcC--CCCeeeEeeEEecCCCCeEE
Confidence            3555 458999999999999954   5789999999644  23446789999999999  9999999999954  45566


Q ss_pred             cchhhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhcc
Q 039630          109 LAPLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEI  170 (174)
Q Consensus       109 lv~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  170 (174)
                      +++  ++.++ .+...+....       ..........+++..+..++.|++.||.|||++.
T Consensus        97 lv~--e~~~~-~l~~~~~~~~-------~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~  148 (405)
T 3rgf_A           97 LLF--DYAEH-DLWHIIKFHR-------ASKANKKPVQLPRGMVKSLLYQILDGIHYLHANW  148 (405)
T ss_dssp             EEE--ECCSE-EHHHHHHHHH-------HHC-------CCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             EEE--eCCCC-CHHHHHHHhc-------cccccccccCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            666  44443 2222111000       0000112234889999999999999999999864

>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A

Probab=99.51  E-value=2.9e-14  Score=105.39  Aligned_cols=118  Identities=20%  Similarity=0.286  Sum_probs=84.0

Q ss_pred             hcCCeeecceecccCCeeEEEEEEcC------CCEEEEEEeeccCccc-----------hhHHHHHHHHHhcccccCCCe
Q 039630           32 ATNGFRTSNKIGEGGFGSVYKGRLED------GTVVAVNVLSVESKQG-----------ETEFMSEVASMANINICHENL   94 (174)
Q Consensus        32 ~~~~~~~~~~lg~G~~g~V~~~~~~~------~~~~avK~~~~~~~~~-----------~~~~~~e~~~l~~l~~~h~~i   94 (174)
                      ..++|++.+.||+|+||.||+|....      +..||+|++.......           ......|+..+..+.  |+||
T Consensus        33 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~--h~~i  110 (364)
T 3op5_A           33 AAAAWKVGLPIGQGGFGCIYLADMNSSESVGSDAPCVVKVEPSDNGPLFTELKFYQRAAKPEQIQKWIRTRKLK--YLGV  110 (364)
T ss_dssp             TCCEEEEEEECCCC-CCEEEEEEECCSSCCCTTCSEEEEEEETTCHHHHHHHHHHHHHCCHHHHHHHHHHTTCS--CCCS
T ss_pred             CCCeEEEEEEEecCCCeEEEEeeecCccccccccceEEEEeeccchhHHHHHHHHHhhhhhHHHHHHHHHhhcc--CCCC
Confidence            44689999999999999999998543      4789999987543111           112344555666777  9999


Q ss_pred             eeeecceecCC----CcccchhhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhc
Q 039630           95 VKLHGGCIDGP----SRILAPLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEE  169 (174)
Q Consensus        95 ~~~~~~~~~~~----~~~lv~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~  169 (174)
                      +++++.+....    ..++++  ++. ++.|...+.               .....+++..++.++.|++.||+|||++
T Consensus       111 v~~~~~~~~~~~~~~~~~lv~--e~~-g~~L~~~~~---------------~~~~~l~~~~~~~i~~qi~~~l~~lH~~  171 (364)
T 3op5_A          111 PKYWGSGLHDKNGKSYRFMIM--DRF-GSDLQKIYE---------------ANAKRFSRKTVLQLSLRILDILEYIHEH  171 (364)
T ss_dssp             CCEEEEEEEEETTEEEEEEEE--ECE-EEEHHHHHH---------------HTTSCCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             CeEEeeeeeccCCcceEEEEE--eCC-CCCHHHHHH---------------hccCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence            99999987752    356666  555 455544321               1123589999999999999999999976

>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A*

Probab=99.51  E-value=3.5e-14  Score=102.18  Aligned_cols=114  Identities=15%  Similarity=0.177  Sum_probs=86.2

Q ss_pred             CCeeec-ceecccCCeeEEEEE-EcCCCEEEEEEeeccCccchhHHHHHHHHHh-cccccCCCeeeeecceec----CCC
Q 039630           34 NGFRTS-NKIGEGGFGSVYKGR-LEDGTVVAVNVLSVESKQGETEFMSEVASMA-NINICHENLVKLHGGCID----GPS  106 (174)
Q Consensus        34 ~~~~~~-~~lg~G~~g~V~~~~-~~~~~~~avK~~~~~~~~~~~~~~~e~~~l~-~l~~~h~~i~~~~~~~~~----~~~  106 (174)
                      ++|.+. +.||+|+||.||++. ..++..||+|+++.     ...+.+|+.++. ...  |+||+++++.+..    ...
T Consensus        17 ~~y~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~-----~~~~~~e~~~~~~~~~--h~~i~~~~~~~~~~~~~~~~   89 (299)
T 3m2w_A           17 DDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQD-----CPKARREVELHWRASQ--CPHIVRIVDVYENLYAGRKC   89 (299)
T ss_dssp             GTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEC-----SHHHHHHHHHHHHHTT--STTBCCEEEEEEEEETTEEE
T ss_pred             cchhhcCcccccCCCeEEEEEEEcCCCcEEEEEEecc-----cHHHHHHHHHHHHhcc--CCCchhHHhhhhhhcCCCce
Confidence            456666 789999999999998 46789999999963     235678888774 456  9999999999876    455


Q ss_pred             cccchhhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhcc
Q 039630          107 RILAPLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEI  170 (174)
Q Consensus       107 ~~lv~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  170 (174)
                      .++++  ++.+++.+...+..              .....+++..+..++.|++.||.|||++.
T Consensus        90 ~~lv~--e~~~~~~L~~~l~~--------------~~~~~~~~~~~~~i~~qi~~~l~~lH~~~  137 (299)
T 3m2w_A           90 LLIVM--ECLDGGELFSRIQD--------------RGDQAFTEREASEIMKSIGEAIQYLHSIN  137 (299)
T ss_dssp             EEEEE--CCCCSCBHHHHHHH--------------CTTCCCBHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             EEEEE--eecCCCcHHHHHHh--------------ccCCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            66666  66666666553321              11235789999999999999999999863

>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major}

Probab=99.51  E-value=8.1e-14  Score=102.58  Aligned_cols=122  Identities=16%  Similarity=0.191  Sum_probs=78.0

Q ss_pred             hHHhhcCCeeecceecccCCeeEEEEEE-cCCCEEEEEEeeccCccchhHHHHHHHHHhcccccCCCeeeeecceecCCC
Q 039630           28 ELKIATNGFRTSNKIGEGGFGSVYKGRL-EDGTVVAVNVLSVESKQGETEFMSEVASMANINICHENLVKLHGGCIDGPS  106 (174)
Q Consensus        28 ~~~~~~~~~~~~~~lg~G~~g~V~~~~~-~~~~~~avK~~~~~~~~~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~~~~~  106 (174)
                      ......++|.+.+.||+|+||.||++.. .++..||+|++... .........++..+..++  |+||+++++++...+.
T Consensus        17 ~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~-~~~~~~~~~~~~~l~~l~--h~niv~~~~~~~~~~~   93 (360)
T 3e3p_A           17 RSRKEMDRFQVERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQD-PRFRNRELQIMQDLAVLH--HPNIVQLQSYFYTLGE   93 (360)
T ss_dssp             HHHHHHTTEEEC----------CEEEEETTTCCEEEEEEEECC-TTCCCHHHHHHHHHHHHC--CTTBCCEEEEEEEECS
T ss_pred             hchhhccceEEEEEEecCCCeEEEEEEECCCCCEEEEEEEecC-ccccHHHHHHHHHHHhcC--CCCcccHHHhhhcccc
Confidence            3444557899999999999999999994 57899999998644 233445667788888888  9999999999866433


Q ss_pred             -------cccchhhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhh
Q 039630          107 -------RILAPLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIH  167 (174)
Q Consensus       107 -------~~lv~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH  167 (174)
                             .++++  ++.++..... +.         ..   ......+++..+..++.|++.||.|||
T Consensus        94 ~~~~~~~~~lv~--e~~~~~l~~~-~~---------~~---~~~~~~~~~~~~~~~~~qi~~al~~lH  146 (360)
T 3e3p_A           94 RDRRDIYLNVVM--EYVPDTLHRC-CR---------NY---YRRQVAPPPILIKVFLFQLIRSIGCLH  146 (360)
T ss_dssp             SCTTCEEEEEEE--ECCSCBHHHH-HH---------HH---HTTTCCCCHHHHHHHHHHHHHHHHHHT
T ss_pred             ccccceeEEEEe--ecccccHHHH-HH---------HH---hhcccCCCHHHHHHHHHHHHHHHHHHh
Confidence                   45555  5544332111 10         00   122335788888999999999999999

>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens}

Probab=99.50  E-value=1.1e-14  Score=110.09  Aligned_cols=118  Identities=18%  Similarity=0.126  Sum_probs=85.7

Q ss_pred             HhhcCCeeecceecccCCeeEEEEEEcCCCEEEEEEeeccCccchhHHHHHHHHHhcc-cccCCCeeeeecceecCCCcc
Q 039630           30 KIATNGFRTSNKIGEGGFGSVYKGRLEDGTVVAVNVLSVESKQGETEFMSEVASMANI-NICHENLVKLHGGCIDGPSRI  108 (174)
Q Consensus        30 ~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~avK~~~~~~~~~~~~~~~e~~~l~~l-~~~h~~i~~~~~~~~~~~~~~  108 (174)
                      .....+|...+.||+|+||.|+.....+++.||||.+....   ...+.+|+.+++.+ +  ||||+++++.+......+
T Consensus        20 ~i~~~~y~~~~~LG~G~~G~V~~~~~~~~~~vAvK~~~~~~---~~~~~~E~~~l~~l~~--HpnIv~l~~~~~~~~~~~   94 (432)
T 3p23_A           20 IVGKISFCPKDVLGHGAEGTIVYRGMFDNRDVAVKRILPEC---FSFADREVQLLRESDE--HPNVIRYFCTEKDRQFQY   94 (432)
T ss_dssp             EETTEEEEEEEEEEECGGGCEEEEEESSSSEEEEEEECTTT---EEECHHHHHHHHHSCC--CTTBCCEEEEEEETTEEE
T ss_pred             EEccEEEecCCeeecCcCEEEEEEEEeCCeEEEEEEECHHH---HHHHHHHHHHHHhccC--CCCcCeEEEEEecCCEEE
Confidence            33345689999999999999765555678999999996432   23456899999988 6  999999999999888888


Q ss_pred             cchhhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhcc
Q 039630          109 LAPLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEI  170 (174)
Q Consensus       109 lv~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  170 (174)
                      +++  ++..+ .+...+..               ............++.|++.||.|||++.
T Consensus        95 lv~--E~~~g-~L~~~l~~---------------~~~~~~~~~~~~i~~qi~~aL~~LH~~~  138 (432)
T 3p23_A           95 IAI--ELCAA-TLQEYVEQ---------------KDFAHLGLEPITLLQQTTSGLAHLHSLN  138 (432)
T ss_dssp             EEE--ECCSE-EHHHHHHS---------------SSCCCCSSCHHHHHHHHHHHHHHHHHTT
T ss_pred             EEE--ECCCC-CHHHHHHh---------------cCCCccchhHHHHHHHHHHHHHHHHHCc
Confidence            888  55443 44332211               1112233344678999999999999864

>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A*

Probab=99.50  E-value=7.8e-14  Score=102.06  Aligned_cols=114  Identities=17%  Similarity=0.202  Sum_probs=82.3

Q ss_pred             CCeeec-ceecccCCeeEEEEE-EcCCCEEEEEEeeccCccchhHHHHHHH-HHhcccccCCCeeeeecceec----CCC
Q 039630           34 NGFRTS-NKIGEGGFGSVYKGR-LEDGTVVAVNVLSVESKQGETEFMSEVA-SMANINICHENLVKLHGGCID----GPS  106 (174)
Q Consensus        34 ~~~~~~-~~lg~G~~g~V~~~~-~~~~~~~avK~~~~~~~~~~~~~~~e~~-~l~~l~~~h~~i~~~~~~~~~----~~~  106 (174)
                      ++|.+. +.||+|+||.||+|. ..+++.||+|++...    . ....|+. .+..+.  |+|++++++.+..    ...
T Consensus        28 ~~y~i~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~----~-~~~~e~~~~~~~~~--h~~i~~~~~~~~~~~~~~~~  100 (336)
T 3fhr_A           28 DDYQLSKQVLGLGVNGKVLECFHRRTGQKCALKLLYDS----P-KARQEVDHHWQASG--GPHIVCILDVYENMHHGKRC  100 (336)
T ss_dssp             GTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESS----H-HHHHHHHHHHHHTT--STTBCCEEEEEEEEETTEEE
T ss_pred             ceeEecceeeeeCCCeEEEEEEECCCCCEEEEEEecCc----H-HHHHHHHHHHHhcC--CCChHHHHHHHhhccCCCce
Confidence            468875 469999999999999 457899999999643    1 2233333 345556  9999999999876    233


Q ss_pred             cccchhhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhcc
Q 039630          107 RILAPLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEI  170 (174)
Q Consensus       107 ~~lv~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  170 (174)
                      .++++  ++.+++.+...+..              .....+++..+..++.|++.||.|||++.
T Consensus       101 ~~lv~--e~~~gg~L~~~l~~--------------~~~~~l~~~~~~~i~~ql~~~l~~LH~~~  148 (336)
T 3fhr_A          101 LLIIM--ECMEGGELFSRIQE--------------RGDQAFTEREAAEIMRDIGTAIQFLHSHN  148 (336)
T ss_dssp             EEEEE--ECCTTEEHHHHHHT--------------C-CCCCBHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             EEEEE--eccCCCCHHHHHHh--------------cCCCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            56666  77777666654321              11235789999999999999999999863

>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis}

Probab=99.50  E-value=8.1e-14  Score=104.09  Aligned_cols=116  Identities=20%  Similarity=0.241  Sum_probs=83.4

Q ss_pred             CCeeecceecccCCeeEEEEEEcCCCEEEEEEeeccCccchhHHHHHHHHHhcccccCCCeeeeecceecCCC------c
Q 039630           34 NGFRTSNKIGEGGFGSVYKGRLEDGTVVAVNVLSVESKQGETEFMSEVASMANINICHENLVKLHGGCIDGPS------R  107 (174)
Q Consensus        34 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~avK~~~~~~~~~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~~~~~------~  107 (174)
                      .+|...+.||+|+||.||++....+..+|+|.+.....    ...+|+.+++.++  |+||+++++++...+.      .
T Consensus        40 ~~Y~~~~~lG~G~~g~V~~a~~~~~~~~aikk~~~~~~----~~~~E~~il~~l~--h~niv~l~~~~~~~~~~~~~~~~  113 (394)
T 4e7w_A           40 IAYTNCKVIGNGSFGVVFQAKLVESDEVAIKKVLQDKR----FKNRELQIMRIVK--HPNVVDLKAFFYSNGDKKDEVFL  113 (394)
T ss_dssp             EEEEEEEEEEEETTEEEEEEEETTTEEEEEEEEECCTT----SCCHHHHHHHTCC--CTTBCCEEEEEEEESSSSSCEEE
T ss_pred             ceEEEeEEEeeCCCeEEEEEEECCCCeEEEEEEecCcc----hHHHHHHHHHhCC--CCCcceEEEEEEecCCCCCceEE
Confidence            46999999999999999999976566688888854321    2236899999999  9999999999865433      4


Q ss_pred             ccchhhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhcc
Q 039630          108 ILAPLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEI  170 (174)
Q Consensus       108 ~lv~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  170 (174)
                      ++++  ++.+...+....          ..   ......+++..+..++.|++.||+|||++.
T Consensus       114 ~lv~--e~~~~~l~~~~~----------~~---~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~  161 (394)
T 4e7w_A          114 NLVL--EYVPETVYRASR----------HY---AKLKQTMPMLLIKLYMYQLLRSLAYIHSIG  161 (394)
T ss_dssp             EEEE--ECCSEEHHHHHH----------HH---HHTTSCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             EEEe--eccCccHHHHHH----------HH---HhhcCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            5566  554433221100          00   011235788999999999999999999853

>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A*

Probab=99.49  E-value=1e-14  Score=114.83  Aligned_cols=120  Identities=24%  Similarity=0.271  Sum_probs=90.6

Q ss_pred             CCeeecceecccCCeeEEEEE-EcCCCEEEEEEeecc-CccchhHHHHHHHHHhcccccCCCeeeeecceec------CC
Q 039630           34 NGFRTSNKIGEGGFGSVYKGR-LEDGTVVAVNVLSVE-SKQGETEFMSEVASMANINICHENLVKLHGGCID------GP  105 (174)
Q Consensus        34 ~~~~~~~~lg~G~~g~V~~~~-~~~~~~~avK~~~~~-~~~~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~~------~~  105 (174)
                      ++|++.+.||+|+||.||++. ..++..||+|+++.. .......+.+|+.++..++  ||||+++++++..      .+
T Consensus        14 grY~i~~~LG~G~fG~Vyla~~~~tg~~VAVKvi~~~~~~~~~~~~~~Ei~iL~~L~--HpnIV~l~~v~~~~~~~~~~~   91 (676)
T 3qa8_A           14 GPWEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLN--HPNVVSAREVPDGLQKLAPND   91 (676)
T ss_dssp             ---CCCCCCCBCSSSBCCCCCCTTTTCCEEECCCCSCCCHHHHHHHHHHHHHHHHCC--BTTBCCEEECCTTTCCCCTTS
T ss_pred             CCeEEEEEEeeCCCeEEEEEEECCCCcEEEEEEecccCCHHHHHHHHHHHHHHHhCC--CCCCCceeeeecccccccCCC
Confidence            579999999999999999998 456889999998754 3344567899999999999  9999999998765      45


Q ss_pred             CcccchhhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhcc
Q 039630          106 SRILAPLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEI  170 (174)
Q Consensus       106 ~~~lv~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  170 (174)
                      ..++++  ++.+++.+...+..             ......+++..+..++.|++.||+|||++.
T Consensus        92 ~~~LVm--Ey~~ggsL~~~L~~-------------~~~~~~lse~~i~~I~~QLl~aL~yLHs~g  141 (676)
T 3qa8_A           92 LPLLAM--EYCEGGDLRKYLNQ-------------FENCCGLKEGPIRTLLSDISSALRYLHENR  141 (676)
T ss_dssp             SCCCEE--ECCSSCBHHHHHHS-------------SSCTTCCCSSHHHHHHHHHHHHHHHHHHTT
T ss_pred             eEEEEE--EeCCCCCHHHHHHh-------------cccCCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            556666  66666666543311             111224778888899999999999999863

>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A*

Probab=99.49  E-value=7.1e-14  Score=101.80  Aligned_cols=118  Identities=17%  Similarity=0.240  Sum_probs=90.6

Q ss_pred             cCCeeecceecccCCeeEEEEEE--cCCCEEEEEEeeccCccchhHHHHHHHHHhcccccCCC------eeeeecceecC
Q 039630           33 TNGFRTSNKIGEGGFGSVYKGRL--EDGTVVAVNVLSVESKQGETEFMSEVASMANINICHEN------LVKLHGGCIDG  104 (174)
Q Consensus        33 ~~~~~~~~~lg~G~~g~V~~~~~--~~~~~~avK~~~~~~~~~~~~~~~e~~~l~~l~~~h~~------i~~~~~~~~~~  104 (174)
                      .++|++.+.||+|+||.||++..  .++..||+|+++.. ......+.+|+.++..+.  |++      ++++++.+...
T Consensus        13 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~e~~~l~~l~--~~~~~~~~~i~~~~~~~~~~   89 (339)
T 1z57_A           13 SARYEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNV-DRYCEAARSEIQVLEHLN--TTDPNSTFRCVQMLEWFEHH   89 (339)
T ss_dssp             TTTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSS-HHHHHHHHHHHHHHHHHH--HHCTTCTTCBCCEEEEEEET
T ss_pred             cCceEEEEEEecCCCeEEEEEEecCCCCcEEEEEEEecC-CchhHHHHHHHHHHHHhh--hcCCCCceeeEeeecccccC
Confidence            46799999999999999999984  46889999999743 234566888999988876  554      89999999988


Q ss_pred             CCcccchhhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhcc
Q 039630          105 PSRILAPLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEI  170 (174)
Q Consensus       105 ~~~~lv~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  170 (174)
                      +..++++  ++. .+.+...+..              .....+++..+..++.|++.||+|||++.
T Consensus        90 ~~~~lv~--e~~-~~~l~~~l~~--------------~~~~~~~~~~~~~~~~qi~~~l~~lH~~~  138 (339)
T 1z57_A           90 GHICIVF--ELL-GLSTYDFIKE--------------NGFLPFRLDHIRKMAYQICKSVNFLHSNK  138 (339)
T ss_dssp             TEEEEEE--ECC-CCBHHHHHHH--------------TTTCCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             CcEEEEE--cCC-CCCHHHHHHh--------------cCCCCCcHHHHHHHHHHHHHHHHHHHHCC
Confidence            8888888  555 3444432211              11224788899999999999999999863

>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A*

Probab=99.49  E-value=8.9e-14  Score=105.14  Aligned_cols=120  Identities=18%  Similarity=0.072  Sum_probs=83.8

Q ss_pred             CCeeecceecccCCeeEEEEEEcCCCEEEEEEeeccCccchhHHHHHHHHHhcc-cccCCCeeeeecceecCCCcccchh
Q 039630           34 NGFRTSNKIGEGGFGSVYKGRLEDGTVVAVNVLSVESKQGETEFMSEVASMANI-NICHENLVKLHGGCIDGPSRILAPL  112 (174)
Q Consensus        34 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~avK~~~~~~~~~~~~~~~e~~~l~~l-~~~h~~i~~~~~~~~~~~~~~lv~~  112 (174)
                      +.|...+.||+|+||.||.+...+|+.||||++...   ..+.+.+|+.++..+ +  ||||+++++.+...+..++++ 
T Consensus        15 ~~~~~~~~LG~G~~g~V~~~~~~~g~~vAvK~~~~~---~~~~~~~E~~~l~~l~~--HpnIv~~~~~~~~~~~~~lv~-   88 (434)
T 2rio_A           15 NLVVSEKILGYGSSGTVVFQGSFQGRPVAVKRMLID---FCDIALMEIKLLTESDD--HPNVIRYYCSETTDRFLYIAL-   88 (434)
T ss_dssp             SCEEEEEEEEECSTTCEEEEEESSSSEEEEEEEEGG---GHHHHHHHHHHHHHHTT--STTBCCEEEEEECSSEEEEEE-
T ss_pred             heeeccCeEeeCCCeEEEEEEEECCeEEEEEEEcHH---HHHHHHHHHHHHHhccC--CCCcCeEEEEEecCCeEEEEE-
Confidence            346667899999999998766667999999998743   345678899999876 6  999999999999888888888 


Q ss_pred             hhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhcc
Q 039630          113 QASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEI  170 (174)
Q Consensus       113 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  170 (174)
                       ++.+ +.|...+.......         ......++..++.++.||+.||+|||++.
T Consensus        89 -E~~~-gsL~~~l~~~~~~~---------~~~~~~~~~~~~~i~~qi~~aL~~LH~~~  135 (434)
T 2rio_A           89 -ELCN-LNLQDLVESKNVSD---------ENLKLQKEYNPISLLRQIASGVAHLHSLK  135 (434)
T ss_dssp             -CCCS-EEHHHHHHTC---------------------CCHHHHHHHHHHHHHHHHHTT
T ss_pred             -ecCC-CCHHHHHhccCCCc---------hhhhhccchhHHHHHHHHHHHHHHHHHCC
Confidence             5554 35544332211100         00011133345679999999999999863

>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens}

Probab=99.48  E-value=9.2e-14  Score=101.38  Aligned_cols=113  Identities=28%  Similarity=0.444  Sum_probs=82.0

Q ss_pred             hcCCeeecceecccCCeeEEEEEEcCCCEEEEEEeeccCccchhHHHHHHHHHh--cccccCCCeeeeecceec-----C
Q 039630           32 ATNGFRTSNKIGEGGFGSVYKGRLEDGTVVAVNVLSVESKQGETEFMSEVASMA--NINICHENLVKLHGGCID-----G  104 (174)
Q Consensus        32 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~avK~~~~~~~~~~~~~~~e~~~l~--~l~~~h~~i~~~~~~~~~-----~  104 (174)
                      ..++|++.+.||+|+||.||+|.. ++..||+|+++..   ....+..|..+..  .++  |+||+++++.+..     .
T Consensus        11 ~~~~y~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~---~~~~~~~e~~~~~~~~~~--h~~i~~~~~~~~~~~~~~~   84 (336)
T 3g2f_A           11 DLDNLKLLELIGRGRYGAVYKGSL-DERPVAVKVFSFA---NRQNFINEKNIYRVPLME--HDNIARFIVGDERVTADGR   84 (336)
T ss_dssp             CTTSEEEEEEEEECSSEEEEEEEE-TTEEEEEEEEEGG---GHHHHHHHHHHHTSTTCC--CTTBCCEEEEEEEECTTSC
T ss_pred             ChHHhheeeecccCCCeEEEEEEE-CCeEEEEEEeecc---chhhHHHHHHHHHHHhcc--CcchhhheecccccccCCC
Confidence            446899999999999999999976 5889999999743   3334455555544  466  9999999875432     1


Q ss_pred             CCcccchhhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhc
Q 039630          105 PSRILAPLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEE  169 (174)
Q Consensus       105 ~~~~lv~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~  169 (174)
                      ...++++  ++.+++.|...+.                 ....++..+..++.|++.||.|||++
T Consensus        85 ~~~~lv~--e~~~~g~L~~~l~-----------------~~~~~~~~~~~i~~qi~~~L~~LH~~  130 (336)
T 3g2f_A           85 MEYLLVM--EYYPNGSLXKYLS-----------------LHTSDWVSSCRLAHSVTRGLAYLHTE  130 (336)
T ss_dssp             EEEEEEE--CCCTTCBHHHHHH-----------------HCCBCHHHHHHHHHHHHHHHHHHHCC
T ss_pred             ceEEEEE--ecCCCCcHHHHHh-----------------hcccchhHHHHHHHHHHHHHHHHHhh
Confidence            2335666  6666666655331                 11247888889999999999999987

>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens}

Probab=99.48  E-value=3.8e-14  Score=104.27  Aligned_cols=114  Identities=12%  Similarity=0.110  Sum_probs=84.2

Q ss_pred             cCCeeecceecccCCeeEEEEEEc---------CCCEEEEEEeeccCccchhHHHHHHHHHhcccccCCCeeee------
Q 039630           33 TNGFRTSNKIGEGGFGSVYKGRLE---------DGTVVAVNVLSVESKQGETEFMSEVASMANINICHENLVKL------   97 (174)
Q Consensus        33 ~~~~~~~~~lg~G~~g~V~~~~~~---------~~~~~avK~~~~~~~~~~~~~~~e~~~l~~l~~~h~~i~~~------   97 (174)
                      .++|.+.+.||+|+||.||++...         .+..+|+|++...     ..+.+|+.++..++  |+|++++      
T Consensus        41 ~~~y~~~~~lg~G~~g~Vy~~~~~~t~~~~~~~~~~~vavK~~~~~-----~~~~~E~~~l~~l~--h~niv~~~~~~~~  113 (352)
T 2jii_A           41 GRQWKLKSFQTRDNQGILYEAAPTSTLTCDSGPQKQKFSLKLDAKD-----GRLFNEQNFFQRAA--KPLQVNKWKKLYS  113 (352)
T ss_dssp             SCEEEEEEEEEEETTEEEEEEEECC-----------CEEEEEEETT-----STHHHHHHHHHHHC--CHHHHHHHHHHTT
T ss_pred             CCeEEEEEEecCCCCeEEEEEeecCCccccccccCceEEEEEeccc-----chHHHHHHHHHHhc--ccchhhhhhhhcc
Confidence            467999999999999999999943         3789999999743     46789999999998  9999874      


Q ss_pred             ---------ecceec-CCCcccchhhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhh
Q 039630           98 ---------HGGCID-GPSRILAPLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIH  167 (174)
Q Consensus        98 ---------~~~~~~-~~~~~lv~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH  167 (174)
                               ++.+.. ....++++  ++. ++.|...+..              .....+++..+..++.|++.||.|||
T Consensus       114 ~~~~~i~~~~~~~~~~~~~~~lv~--e~~-~~~L~~~l~~--------------~~~~~l~~~~~~~i~~qi~~~L~~LH  176 (352)
T 2jii_A          114 TPLLAIPTCMGFGVHQDKYRFLVL--PSL-GRSLQSALDV--------------SPKHVLSERSVLQVACRLLDALEFLH  176 (352)
T ss_dssp             CTTCSCCCCCEEEEETTTEEEEEE--ECC-CEEHHHHHHH--------------SGGGCCCHHHHHHHHHHHHHHHHHHH
T ss_pred             CCccCccchhhccccCCcEEEEEe--cCC-CcCHHHHHHh--------------CCcCCCCHHHHHHHHHHHHHHHHHHH
Confidence                     444443 45556666  555 4555443311              11245899999999999999999999


Q ss_pred             hcc
Q 039630          168 EEI  170 (174)
Q Consensus       168 ~~~  170 (174)
                      ++.
T Consensus       177 ~~~  179 (352)
T 2jii_A          177 ENE  179 (352)
T ss_dssp             HTT
T ss_pred             hCC
Confidence            863

>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A

Probab=99.46  E-value=2.3e-13  Score=97.53  Aligned_cols=116  Identities=21%  Similarity=0.282  Sum_probs=86.4

Q ss_pred             cCCeeecceecccCCeeEEEEE-EcCCCEEEEEEeeccCccchhHHHHHHHHHhcccccCCCeeeeecce-ecCCCcccc
Q 039630           33 TNGFRTSNKIGEGGFGSVYKGR-LEDGTVVAVNVLSVESKQGETEFMSEVASMANINICHENLVKLHGGC-IDGPSRILA  110 (174)
Q Consensus        33 ~~~~~~~~~lg~G~~g~V~~~~-~~~~~~~avK~~~~~~~~~~~~~~~e~~~l~~l~~~h~~i~~~~~~~-~~~~~~~lv  110 (174)
                      .++|++.+.||+|+||.||+|. ..+++.||+|++....  ....+.+|+.++..+.  |++++..+..+ ...+..+++
T Consensus         8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~e~~~l~~l~--~~~~i~~~~~~~~~~~~~~lv   83 (296)
T 3uzp_A            8 GNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKT--KHPQLHIESKIYKMMQ--GGVGIPTIRWCGAEGDYNVMV   83 (296)
T ss_dssp             TTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEEESCS--SCCHHHHHHHHHHHHT--TSTTCCCEEEEEEETTEEEEE
T ss_pred             ccEEEEEEEEccCCCeEEEEEEEcCCCcEEEEEEecCCc--chhHHHHHHHHHHHhh--cCCCCCccccccCCCCceEEE
Confidence            4679999999999999999999 4678999999987542  2346889999999998  87766655555 445555677


Q ss_pred             hhhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhcc
Q 039630          111 PLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEI  170 (174)
Q Consensus       111 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  170 (174)
                      +  ++. .+.+...+.               .....+++..+..++.|++.||.|||++.
T Consensus        84 ~--e~~-~~~L~~~~~---------------~~~~~~~~~~~~~i~~qi~~~l~~lH~~~  125 (296)
T 3uzp_A           84 M--ELL-GPSLEDLFN---------------FCSRKFSLKTVLLLADQMISRIEYIHSKN  125 (296)
T ss_dssp             E--ECC-CCBHHHHHH---------------HTTTCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             E--Eec-CCCHHHHHH---------------hhccCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            6  554 444433221               11234789999999999999999999853

>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A*

Probab=99.46  E-value=1.7e-13  Score=100.40  Aligned_cols=118  Identities=18%  Similarity=0.209  Sum_probs=89.1

Q ss_pred             cCCeeecceecccCCeeEEEEEE-cCC-CEEEEEEeeccCccchhHHHHHHHHHhcccccCCC------eeeeecceecC
Q 039630           33 TNGFRTSNKIGEGGFGSVYKGRL-EDG-TVVAVNVLSVESKQGETEFMSEVASMANINICHEN------LVKLHGGCIDG  104 (174)
Q Consensus        33 ~~~~~~~~~lg~G~~g~V~~~~~-~~~-~~~avK~~~~~~~~~~~~~~~e~~~l~~l~~~h~~------i~~~~~~~~~~  104 (174)
                      .++|++.+.||+|+||.||++.. .++ ..||+|+++.. ......+.+|+.+++.+.  |++      ++.+.+.+...
T Consensus        18 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~E~~~l~~l~--~~~~~~~~~~~~~~~~~~~~   94 (355)
T 2eu9_A           18 QERYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNV-GKYREAARLEINVLKKIK--EKDKENKFLCVLMSDWFNFH   94 (355)
T ss_dssp             TTTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSC-HHHHHHHHHHHHHHHHHH--HHCTTSCSCBCCEEEEEEET
T ss_pred             cccEEEEEEeeccCCeEEEEEEecCCCceEEEEEEEccc-ccchhHHHHHHHHHHHHh--hcCCCCceeEEEeeeeeeeC
Confidence            46799999999999999999984 344 68999999743 234556788999998887  655      88888988888


Q ss_pred             CCcccchhhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhcc
Q 039630          105 PSRILAPLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEI  170 (174)
Q Consensus       105 ~~~~lv~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  170 (174)
                      +..++++  ++... .+...+..              .....+++..+..++.|++.||+|||++.
T Consensus        95 ~~~~lv~--e~~~~-~l~~~l~~--------------~~~~~~~~~~~~~i~~qi~~~L~~lH~~~  143 (355)
T 2eu9_A           95 GHMCIAF--ELLGK-NTFEFLKE--------------NNFQPYPLPHVRHMAYQLCHALRFLHENQ  143 (355)
T ss_dssp             TEEEEEE--ECCCC-BHHHHHHH--------------TTTCCCCHHHHHHHHHHHHHHHHHHHTTT
T ss_pred             CeEEEEE--eccCC-ChHHHHHh--------------ccCCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            8888888  55533 23222211              11234788999999999999999999863

>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group}

Probab=99.45  E-value=3e-13  Score=103.52  Aligned_cols=117  Identities=18%  Similarity=0.258  Sum_probs=86.5

Q ss_pred             cCCeeecceecccCCeeEEEEE-EcCCCEEEEEEeeccCccchhHHHHHHHHHhcccccCCCeeeeecceecCCCcccch
Q 039630           33 TNGFRTSNKIGEGGFGSVYKGR-LEDGTVVAVNVLSVESKQGETEFMSEVASMANINICHENLVKLHGGCIDGPSRILAP  111 (174)
Q Consensus        33 ~~~~~~~~~lg~G~~g~V~~~~-~~~~~~~avK~~~~~~~~~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~~~~~~~lv~  111 (174)
                      .++|++.+.||+|+||.||+|. ..++..||||++....  ....+..|+.++..+. .++++..+..++...+..++++
T Consensus         6 ~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~--~~~~~~~E~~il~~L~-~~~~i~~i~~~~~~~~~~~lvm   82 (483)
T 3sv0_A            6 GNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKT--KHPQLLYESKIYRILQ-GGTGIPNVRWFGVEGDYNVLVM   82 (483)
T ss_dssp             TTTEECCCCCEECSSCEEEEEEETTTCCEEEEEEEETTC--SSCCHHHHHHHHHHTT-TSTTCCCEEEEEEETTEEEEEE
T ss_pred             CCcEEEEEEEeeCCCEEEEEEEECCCCcEEEEEEecccc--ccHHHHHHHHHHHHhc-CCCCCCeEEEEEeeCCEEEEEE
Confidence            4679999999999999999999 4678999999987543  2335788999999997 2355656666666666667777


Q ss_pred             hhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhcc
Q 039630          112 LQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEI  170 (174)
Q Consensus       112 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  170 (174)
                        ++. ++.|...+.               .....+++..++.++.||+.||.|||++.
T Consensus        83 --e~~-g~sL~~ll~---------------~~~~~l~~~~~~~i~~qi~~aL~yLH~~g  123 (483)
T 3sv0_A           83 --DLL-GPSLEDLFN---------------FCSRKLSLKTVLMLADQMINRVEFVHSKS  123 (483)
T ss_dssp             --ECC-CCBHHHHHH---------------HTTTCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             --ECC-CCCHHHHHH---------------hhcCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence              444 344433221               11234889999999999999999999753

>4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A

Probab=99.45  E-value=1.6e-13  Score=98.31  Aligned_cols=116  Identities=21%  Similarity=0.282  Sum_probs=83.1

Q ss_pred             cCCeeecceecccCCeeEEEEE-EcCCCEEEEEEeeccCccchhHHHHHHHHHhcccccCCCeeeeecce-ecCCCcccc
Q 039630           33 TNGFRTSNKIGEGGFGSVYKGR-LEDGTVVAVNVLSVESKQGETEFMSEVASMANINICHENLVKLHGGC-IDGPSRILA  110 (174)
Q Consensus        33 ~~~~~~~~~lg~G~~g~V~~~~-~~~~~~~avK~~~~~~~~~~~~~~~e~~~l~~l~~~h~~i~~~~~~~-~~~~~~~lv  110 (174)
                      .++|++.+.||+|+||.||++. ..++..||+|++....  ....+..|+.++..+.  |++++..+..+ ...+..+++
T Consensus         8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~e~~~l~~l~--~~~~i~~~~~~~~~~~~~~lv   83 (296)
T 4hgt_A            8 GNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKT--KHPQLHIESKIYKMMQ--GGVGIPTIRWCGAEGDYNVMV   83 (296)
T ss_dssp             ---CEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEC-----CCCHHHHHHHHHHHT--TSTTCCCEEEEEEETTEEEEE
T ss_pred             CCceEEeeeecCCCCeEEEEEEEcCCCceEEEEeecccc--cchHHHHHHHHHHHhc--CCCCCCeeeeecCCCCceEEE
Confidence            4679999999999999999999 4678899999876442  2335788999999998  77766666555 555556677


Q ss_pred             hhhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhcc
Q 039630          111 PLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEI  170 (174)
Q Consensus       111 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  170 (174)
                      +  ++. ++.+...+.               .....+++..+..++.|++.||.|||++.
T Consensus        84 ~--e~~-~~~L~~~~~---------------~~~~~~~~~~~~~i~~qi~~~l~~LH~~~  125 (296)
T 4hgt_A           84 M--ELL-GPSLEDLFN---------------FCSRKFSLKTVLLLADQMISRIEYIHSKN  125 (296)
T ss_dssp             E--ECC-CCBHHHHHH---------------HTTSCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             E--Ecc-CCCHHHHHH---------------HhcCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            6  544 444433221               11224789999999999999999999863

>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A*

Probab=99.43  E-value=3.7e-13  Score=100.03  Aligned_cols=118  Identities=19%  Similarity=0.216  Sum_probs=88.2

Q ss_pred             hcCCeeecceecccCCeeEEEEE-EcCCCEEEEEEeeccCccchhHHHHHHHHHhcccccCC-----CeeeeecceecCC
Q 039630           32 ATNGFRTSNKIGEGGFGSVYKGR-LEDGTVVAVNVLSVESKQGETEFMSEVASMANINICHE-----NLVKLHGGCIDGP  105 (174)
Q Consensus        32 ~~~~~~~~~~lg~G~~g~V~~~~-~~~~~~~avK~~~~~~~~~~~~~~~e~~~l~~l~~~h~-----~i~~~~~~~~~~~  105 (174)
                      ..++|.+.+.||+|+||.||+|. ..+++.||+|+++.. ......+..|+.++..+. .|+     +++.+.+.+...+
T Consensus        52 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~e~~~l~~l~-~~~~~~~~~iv~~~~~~~~~~  129 (382)
T 2vx3_A           52 WMDRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNK-KAFLNQAQIEVRLLELMN-KHDTEMKYYIVHLKRHFMFRN  129 (382)
T ss_dssp             ETTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSS-HHHHHHHHHHHHHHHHHH-HCSSGGGGGBCCEEEEEEETT
T ss_pred             eeeeEEEEEEEeecCCEEEEEEEEcCCCcEEEEEEEecc-HHHHHHHHHHHHHHHHHH-hcccccceeEEEeeeeeccCC
Confidence            34689999999999999999998 456889999999743 233455677888877764 234     4999999999888


Q ss_pred             CcccchhhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhh
Q 039630          106 SRILAPLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHE  168 (174)
Q Consensus       106 ~~~lv~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~  168 (174)
                      ..++|+  ++.++ .+...+..              .....+++..+..++.|++.||.|||+
T Consensus       130 ~~~lv~--e~~~~-~L~~~l~~--------------~~~~~~~~~~~~~i~~qi~~al~~lH~  175 (382)
T 2vx3_A          130 HLCLVF--EMLSY-NLYDLLRN--------------TNFRGVSLNLTRKFAQQMCTALLFLAT  175 (382)
T ss_dssp             EEEEEE--ECCCC-BHHHHHHH--------------TTTSCCCHHHHHHHHHHHHHHHHHHTS
T ss_pred             ceEEEE--ecCCC-CHHHHHhh--------------cCcCCCCHHHHHHHHHHHHHHHHHhcc
Confidence            888888  55443 44332211              111247889999999999999999995

>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A

Probab=99.43  E-value=2.2e-13  Score=100.65  Aligned_cols=119  Identities=18%  Similarity=0.239  Sum_probs=87.0

Q ss_pred             cCCeeecceecccCCeeEEEEE-EcCCCEEEEEEeeccCccchhHHHHHHHHHhcccc---------cCCCeeeeeccee
Q 039630           33 TNGFRTSNKIGEGGFGSVYKGR-LEDGTVVAVNVLSVESKQGETEFMSEVASMANINI---------CHENLVKLHGGCI  102 (174)
Q Consensus        33 ~~~~~~~~~lg~G~~g~V~~~~-~~~~~~~avK~~~~~~~~~~~~~~~e~~~l~~l~~---------~h~~i~~~~~~~~  102 (174)
                      .++|.+.+.||+|+||.||+|. ..+++.||+|++... ......+.+|+.++..+..         .|+||+++++.+.
T Consensus        18 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~i~~~~~~~~   96 (373)
T 1q8y_A           18 DARYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGD-KVYTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLLDHFN   96 (373)
T ss_dssp             TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSC-HHHHHHHHHHHHHHHHHHHTCCSHHHHHHHTTBCCCCEEEE
T ss_pred             CCeEEEEEeeeecCCeEEEEEEecCCCcEEEEEEecCC-ccchhhhhHHHHHHHHhhcccccchhccccchHHHHHHHhh
Confidence            3579999999999999999999 467899999999743 2334567888888877641         2689999999987


Q ss_pred             cCC----CcccchhhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhc
Q 039630          103 DGP----SRILAPLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEE  169 (174)
Q Consensus       103 ~~~----~~~lv~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~  169 (174)
                      ..+    ..++++  ++. ++.+...+..              .....+++..+..++.|++.||+|||++
T Consensus        97 ~~~~~~~~~~lv~--e~~-~~~L~~~~~~--------------~~~~~~~~~~~~~i~~qi~~aL~~lH~~  150 (373)
T 1q8y_A           97 HKGPNGVHVVMVF--EVL-GENLLALIKK--------------YEHRGIPLIYVKQISKQLLLGLDYMHRR  150 (373)
T ss_dssp             EEETTEEEEEEEE--CCC-CEEHHHHHHH--------------TTTSCCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             ccCCCCceEEEEE--ecC-CCCHHHHHHH--------------hhccCCcHHHHHHHHHHHHHHHHHHHhc
Confidence            653    455555  444 3333332210              1123478889999999999999999986

>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A*

Probab=99.38  E-value=6.1e-13  Score=98.52  Aligned_cols=118  Identities=9%  Similarity=0.065  Sum_probs=69.5

Q ss_pred             hcCCeeecceecccCCeeEEEEE-EcCCCEEEEEEeeccCc---cchhHHHHHH---HHHhcccccCCCeeeeecc----
Q 039630           32 ATNGFRTSNKIGEGGFGSVYKGR-LEDGTVVAVNVLSVESK---QGETEFMSEV---ASMANINICHENLVKLHGG----  100 (174)
Q Consensus        32 ~~~~~~~~~~lg~G~~g~V~~~~-~~~~~~~avK~~~~~~~---~~~~~~~~e~---~~l~~l~~~h~~i~~~~~~----  100 (174)
                      ....|...+.||+|+||.||+|. ..+++.||+|+++....   .....+.+|+   .+++. +  |||+++++..    
T Consensus        60 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~~~~l~~-~--hp~iv~~~~~~~~p  136 (371)
T 3q60_A           60 GERKLKLVEPLRVGDRSVVFLVRDVERLEDFALKVFTMGAENSRSELERLHEATFAAARLLG-E--SPEEARDRRRLLLP  136 (371)
T ss_dssp             CEEEEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECCSTTHHHHHHHHHHHHHHHHHHHC-------------CBCCC
T ss_pred             CceeeeeeeeccCCCCEEEEEEEECCCCceeEEEEEEecccccccHHHHHHHHHHHHHHhcc-c--ChhhhhhceeEEee
Confidence            34459999999999999999999 45789999999986532   2344566774   45555 6  9998875533    


Q ss_pred             ---eecCC-----------------CcccchhhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHH------HH
Q 039630          101 ---CIDGP-----------------SRILAPLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIAR------RE  154 (174)
Q Consensus       101 ---~~~~~-----------------~~~lv~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~  154 (174)
                         +...+                 ..++|+  ++.+ +.|...+...               ...+.+...      ..
T Consensus       137 ~d~~~~~~~~~~~~~~~~~~~~~~~~~~lv~--e~~~-~~L~~~l~~~---------------~~~~~~~~~~~~~vk~~  198 (371)
T 3q60_A          137 SDAVAVQSQPPFAQLSPGQDDYAVANYLLLM--PAAS-VDLELLFSTL---------------DFVYVFRGDEGILALHI  198 (371)
T ss_dssp             CEEEEETTSCSSSBCSCC---CCEEEEEEEE--CCCS-EEHHHHHHHH---------------HHSCCCCHHHHHHHHHH
T ss_pred             ehheecCCCCCeeeccCCcccceeeeEEEEe--cCCC-CCHHHHHHHh---------------ccccchhhhhhhhhHHH
Confidence               32222                 246666  5544 4444433211               111233333      56


Q ss_pred             HHHHHHHHHHHhhhcc
Q 039630          155 IALGIARGLAYIHEEI  170 (174)
Q Consensus       155 ~~~qi~~gl~yLH~~~  170 (174)
                      ++.|++.||+|||++.
T Consensus       199 i~~qi~~aL~~LH~~~  214 (371)
T 3q60_A          199 LTAQLIRLAANLQSKG  214 (371)
T ss_dssp             HHHHHHHHHHHHHHTT
T ss_pred             HHHHHHHHHHHHHHCC
Confidence            7799999999999753

>1zar_A RIO2 kinase; serine kinase, winged-helix, RIO domain, ADP-Mn complex, rRNA processing, transferase; HET: ADP; 1.75A {Archaeoglobus fulgidus} SCOP: a.4.5.56 d.144.1.9 PDB: 1tqi_A* 1tqp_A* 1tqm_A* 1zao_A*

Probab=99.28  E-value=1.1e-11  Score=88.66  Aligned_cols=106  Identities=13%  Similarity=0.034  Sum_probs=73.1

Q ss_pred             cCCeeecceecccCCeeEEEEEEcCCCEEEEEEeeccCc------------------cchhHHHHHHHHHhcccccCCCe
Q 039630           33 TNGFRTSNKIGEGGFGSVYKGRLEDGTVVAVNVLSVESK------------------QGETEFMSEVASMANINICHENL   94 (174)
Q Consensus        33 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~avK~~~~~~~------------------~~~~~~~~e~~~l~~l~~~h~~i   94 (174)
                      ...|.+.+.||+|+||.||+|...+|..+|+|+++....                  .....+.+|+.++..++  |   
T Consensus        89 ~~~~~~~~~iG~G~~g~Vy~~~~~~g~~valK~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~E~~~l~~l~--~---  163 (282)
T 1zar_A           89 GKVDAIGKLMGEGKESAVFNCYSEKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKLQ--G---  163 (282)
T ss_dssp             TSCSEEEEEEEECSSEEEEEEEETTTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHTT--T---
T ss_pred             CeEEEecCEeccCCCceEEEEEeCCCCEEEEEEEECCCCchhhhhhhhhhcchhhHHHHHHHHHHHHHHHHhcc--C---
Confidence            345667799999999999999987789999999964321                  12456889999999996  4   


Q ss_pred             eeeecceecCCCcccchhhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhc
Q 039630           95 VKLHGGCIDGPSRILAPLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEE  169 (174)
Q Consensus        95 ~~~~~~~~~~~~~~lv~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~  169 (174)
                      +++.+.+. .+..++++  ++.+++.|.. +                      .......++.|++.||.|||++
T Consensus       164 ~~v~~~~~-~~~~~lvm--E~~~g~~L~~-l----------------------~~~~~~~i~~qi~~~l~~lH~~  212 (282)
T 1zar_A          164 LAVPKVYA-WEGNAVLM--ELIDAKELYR-V----------------------RVENPDEVLDMILEEVAKFYHR  212 (282)
T ss_dssp             SSSCCEEE-EETTEEEE--ECCCCEEGGG-C----------------------CCSCHHHHHHHHHHHHHHHHHT
T ss_pred             CCcCeEEe-ccceEEEE--EecCCCcHHH-c----------------------chhhHHHHHHHHHHHHHHHHHC
Confidence            44444443 24456666  5555554433 1                      0112335899999999999975

>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii}

Probab=99.20  E-value=1e-11  Score=93.23  Aligned_cols=55  Identities=13%  Similarity=0.139  Sum_probs=44.5

Q ss_pred             CCeeecceecccCCeeEEEEE-EcCCCEEEEEEeeccC---ccchhHHHHHHHHHhccc
Q 039630           34 NGFRTSNKIGEGGFGSVYKGR-LEDGTVVAVNVLSVES---KQGETEFMSEVASMANIN   88 (174)
Q Consensus        34 ~~~~~~~~lg~G~~g~V~~~~-~~~~~~~avK~~~~~~---~~~~~~~~~e~~~l~~l~   88 (174)
                      ..|...+.||+|+||.||+|. ..+|+.||||+++...   ....+.+.+|+.++..+.
T Consensus        78 ~~~~~~~~LG~G~fG~Vy~a~~~~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~~~~l~  136 (413)
T 3dzo_A           78 RTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLR  136 (413)
T ss_dssp             EEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEECCSCC----CCHHHHHHHHGGGGST
T ss_pred             eeEEEecccccCCCEEEEEEEecCCCCceEEEEEecCCCccHHHHHHHHHHHHHHHhhc
Confidence            457888999999999999999 5679999999997442   233567889999998886

>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A*

Probab=99.18  E-value=7.7e-11  Score=91.37  Aligned_cols=104  Identities=12%  Similarity=0.068  Sum_probs=70.2

Q ss_pred             eecceecccCCeeEEEEEEcCCCEEEEEEeeccCcc--------chhHHHHHHHHHhcccccCCCeeeeecceecCCCcc
Q 039630           37 RTSNKIGEGGFGSVYKGRLEDGTVVAVNVLSVESKQ--------GETEFMSEVASMANINICHENLVKLHGGCIDGPSRI  108 (174)
Q Consensus        37 ~~~~~lg~G~~g~V~~~~~~~~~~~avK~~~~~~~~--------~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~~~~~~~  108 (174)
                      ...+.||+|+||.||++.. .+..+++|........        ..+.+.+|+.++++++  |+||+++...+...+..+
T Consensus       339 ~~~~~LG~G~fg~Vy~~~~-~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~--h~nIv~~~~~~~~~~~~~  415 (540)
T 3en9_A          339 IPEHLIGKGAEADIKRDSY-LDFDVIIKERVKKGYRDERLDENIRKSRTAREARYLALVK--DFGIPAPYIFDVDLDNKR  415 (540)
T ss_dssp             ---------CCEEEEEEEC-SSCEEEEEEECCCTTSCHHHHHHHHHHHHHHHHHHHHHGG--GGTCCCCCEEEEETTTTE
T ss_pred             CCCCEEeeCCCEEEEEEEE-CCCeEEEEEEecccccchhhhhHHHHHHHHHHHHHHHhcC--CCCcCceEEEEEeCCccE
Confidence            3457899999999999954 4678889887533111        1345789999999999  999996666666677777


Q ss_pred             cchhhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhc
Q 039630          109 LAPLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEE  169 (174)
Q Consensus       109 lv~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~  169 (174)
                      +++  ++.+++.|...+                ..        ...++.|++.||.|||++
T Consensus       416 lVm--E~~~ggsL~~~l----------------~~--------~~~i~~qi~~aL~~LH~~  450 (540)
T 3en9_A          416 IMM--SYINGKLAKDVI----------------ED--------NLDIAYKIGEIVGKLHKN  450 (540)
T ss_dssp             EEE--ECCCSEEHHHHS----------------TT--------CTHHHHHHHHHHHHHHHT
T ss_pred             EEE--ECCCCCCHHHHH----------------HH--------HHHHHHHHHHHHHHHHHC
Confidence            777  776666665522                10        457899999999999975

>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*

Probab=99.01  E-value=3.4e-10  Score=88.29  Aligned_cols=107  Identities=12%  Similarity=0.011  Sum_probs=74.7

Q ss_pred             ecccCCeeEEEEE-EcCCCEEEEEEeeccCc----------cchhHHHHHHHHHhcccccCCCeeeeecceecCCCcccc
Q 039630           42 IGEGGFGSVYKGR-LEDGTVVAVNVLSVESK----------QGETEFMSEVASMANINICHENLVKLHGGCIDGPSRILA  110 (174)
Q Consensus        42 lg~G~~g~V~~~~-~~~~~~~avK~~~~~~~----------~~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~~~~~~~lv  110 (174)
                      .+.|+.|....+. .-.|..+++|++.....          ...+.+.+|+.+|+++. .|+||+++++++.+....|+|
T Consensus       242 ~~~~~~~~h~~~rr~~fg~~~~~K~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~~~-~~~~i~~~~~~~ed~~~~yLV  320 (569)
T 4azs_A          242 PYAGAGLAHKRSRRYFFGEDYVCKFFYYDMPHGILTAEESQRNKYELHNEIKFLTQPP-AGFDAPAVLAHGENAQSGWLV  320 (569)
T ss_dssp             -C--------CCEEEEECSSEEEEEEESSCSTTCSCHHHHHHHHHHHHHHHHHHHSCC-TTCCCCCEEEEEECSSEEEEE
T ss_pred             cccCCcccccccccccccceeEEEEEecccccccchhhhhHHHHHHHHHHHHHHHhcC-CCCCeeEEEEEEEECCEEEEE
Confidence            3445555444433 34578899999975421          12356899999999995 499999999999999999999


Q ss_pred             hhhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhcc
Q 039630          111 PLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEI  170 (174)
Q Consensus       111 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  170 (174)
                      |  |+++++.|...+...                .+++..   .|+.||+.||+|+|++.
T Consensus       321 M--Eyv~G~~L~d~i~~~----------------~~l~~~---~I~~QIl~AL~ylH~~G  359 (569)
T 4azs_A          321 M--EKLPGRLLSDMLAAG----------------EEIDRE---KILGSLLRSLAALEKQG  359 (569)
T ss_dssp             E--ECCCSEEHHHHHHTT----------------CCCCHH---HHHHHHHHHHHHHHHTT
T ss_pred             E--ecCCCCcHHHHHHhC----------------CCCCHH---HHHHHHHHHHHHHHHCC
Confidence            9  888888888755322                234543   47899999999998764

>1zth_A RIO1 serine protein kinase; ribosome biogenesis, rRNA, ADP, manganese, transferase; HET: ADP; 1.89A {Archaeoglobus fulgidus} PDB: 1zp9_A* 1ztf_A*

Probab=98.98  E-value=3.2e-10  Score=79.95  Aligned_cols=112  Identities=13%  Similarity=0.039  Sum_probs=69.1

Q ss_pred             CeeecceecccCCeeEEEEEE-cCCCE--EEEEEeeccCcc------------------------chhHHHHHHHHHhcc
Q 039630           35 GFRTSNKIGEGGFGSVYKGRL-EDGTV--VAVNVLSVESKQ------------------------GETEFMSEVASMANI   87 (174)
Q Consensus        35 ~~~~~~~lg~G~~g~V~~~~~-~~~~~--~avK~~~~~~~~------------------------~~~~~~~e~~~l~~l   87 (174)
                      -|.+.+.||+|+||.||+|.. .+|..  ||+|+++.....                        ....+.+|+.++..+
T Consensus        48 ~~~i~~~ig~G~~g~Vy~a~~~~~g~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l  127 (258)
T 1zth_A           48 ITAMGGVISTGKEANVFYADGVFDGKPVAMAVKIYRIETSEFDKMDEYLYGDERFDMRRISPKEKVFIWTEKEFRNLERA  127 (258)
T ss_dssp             EEEEEEEEEECSSEEEEEEEEEETTEEEEEEEEEECCC-------GGGTTTCTTSCC----CHHHHHHHHHHHHHHHHHH
T ss_pred             chhhCCEEeecceEEEEEEEEcCCCcEeeEEEEEEECCccchhhHHHhhcccchhhhhccChHHHHHHHHHHHHHHHHHH
Confidence            367889999999999999996 77888  999997643111                        012578899999998


Q ss_pred             cccCCCe--eeeecceecCCCcccchhhhhhhh-hhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHH
Q 039630           88 NICHENL--VKLHGGCIDGPSRILAPLQASIEA-LFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLA  164 (174)
Q Consensus        88 ~~~h~~i--~~~~~~~~~~~~~~lv~~~~~~~~-~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~  164 (174)
                      .  |+++  ..++..    +..++|+  ++.+. +.+...+.         ..   .   ...++.....++.|++.||.
T Consensus       128 ~--~~~i~~p~~~~~----~~~~lVm--E~~g~~g~~~~~L~---------~~---~---~~~~~~~~~~i~~qi~~~l~  184 (258)
T 1zth_A          128 K--EAGVSVPQPYTY----MKNVLLM--EFIGEDELPAPTLV---------EL---G---RELKELDVEGIFNDVVENVK  184 (258)
T ss_dssp             H--HTTCCCCCEEEE----ETTEEEE--ECCEETTEECCBHH---------HH---G---GGGGGSCHHHHHHHHHHHHH
T ss_pred             H--hCCCCCCeEEEc----CCCEEEE--EecCCCCCccccHH---------HH---h---hccChHHHHHHHHHHHHHHH
Confidence            7  6653  233321    2345666  44421 21100000         00   0   00123345678999999999


Q ss_pred             Hhh-hc
Q 039630          165 YIH-EE  169 (174)
Q Consensus       165 yLH-~~  169 (174)
                      ||| ++
T Consensus       185 ~lH~~~  190 (258)
T 1zth_A          185 RLYQEA  190 (258)
T ss_dssp             HHHHTS
T ss_pred             HHHHHC
Confidence            999 53

>4gyi_A RIO2 kinase; protein kinase, ADP complex, phosphoaspartate, acyl-phosphat ribosome biogenesis, Ser/Thr protein kinase; HET: PHD ADP; 2.20A {Chaetomium thermophilum} PDB: 4gyg_A

Probab=98.83  E-value=3.8e-09  Score=78.41  Aligned_cols=34  Identities=15%  Similarity=0.225  Sum_probs=31.0

Q ss_pred             CeeecceecccCCeeEEEEEEcCCCEEEEEEeec
Q 039630           35 GFRTSNKIGEGGFGSVYKGRLEDGTVVAVNVLSV   68 (174)
Q Consensus        35 ~~~~~~~lg~G~~g~V~~~~~~~~~~~avK~~~~   68 (174)
                      -|.+...||.|++|.||.|...+|+.||||+++.
T Consensus        96 iY~I~~~IG~Gk~a~VY~a~d~~G~~vAvKi~r~  129 (397)
T 4gyi_A           96 VYSVGSRIGVGKESDIMIVADEKGKQKVLKIHRL  129 (397)
T ss_dssp             CSEEEEEEEECSSEEEEEEECTTCCEEEEEEECT
T ss_pred             EEEecCEeeeCCceEEEEEECCCCCEEEEEEEec
Confidence            4899999999999999999977899999999864

>3tm0_A Aminoglycoside 3'-phosphotransferase; protein kinase, phosphorylation, transferase-antibiotic COMP; HET: ANP B31; 2.10A {Enterococcus faecalis} SCOP: d.144.1.6 PDB: 2b0q_A* 1l8t_A* 3q2j_A* 1j7i_A* 1j7u_A* 3h8p_A* 1j7l_A* 2bkk_A*

Probab=98.10  E-value=1.2e-05  Score=56.43  Aligned_cols=110  Identities=12%  Similarity=-0.020  Sum_probs=78.9

Q ss_pred             CCeeecceecccCCeeEEEEEEcCCCEEEEEEeeccCccchhHHHHHHHHHhcccccCCCeeeeecceecCCCcccchhh
Q 039630           34 NGFRTSNKIGEGGFGSVYKGRLEDGTVVAVNVLSVESKQGETEFMSEVASMANINICHENLVKLHGGCIDGPSRILAPLQ  113 (174)
Q Consensus        34 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~avK~~~~~~~~~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~~~~~~~lv~~~  113 (174)
                      ..|++...++.|+.+.||+.... +..+++|............+.+|+.+++.+. .+..+.++++.+...+..++++  
T Consensus        14 ~~~~~~~~~~g~s~~~v~~~~~~-~~~~vlK~~~~~~~~~~~~~~~E~~~l~~l~-~~~~vP~v~~~~~~~~~~~lv~--   89 (263)
T 3tm0_A           14 EKYRCVKDTEGMSPAKVYKLVGE-NENLYLKMTDSRYKGTTYDVEREKDMMLWLE-GKLPVPKVLHFERHDGWSNLLM--   89 (263)
T ss_dssp             TTSEEEECCSCCSSSEEEEEECS-SCEEEEEEECGGGTTSTTCHHHHHHHHHHHT-TTSCCCCEEEEEEETTEEEEEE--
T ss_pred             ccceeEeeccCCCCCeEEEEECC-CCcEEEEeCCcccCCCHHHHHHHHHHHHHHh-cCCCCCeEEEEEecCCceEEEE--
Confidence            46888888888889999988754 6789999987532233456889999999885 2677788888887777777777  


Q ss_pred             hhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhh
Q 039630          114 ASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHE  168 (174)
Q Consensus       114 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~  168 (174)
                      ++.++..+...+                     .+......++.+++.+|+.||+
T Consensus        90 e~i~G~~l~~~~---------------------~~~~~~~~~~~~l~~~l~~LH~  123 (263)
T 3tm0_A           90 SEADGVLCSEEY---------------------EDEQSPEKIIELYAECIRLFHS  123 (263)
T ss_dssp             ECCSSEEHHHHC---------------------CTTTCHHHHHHHHHHHHHHHHH
T ss_pred             EecCCeehhhcc---------------------CCcccHHHHHHHHHHHHHHHhC
Confidence            666655554311                     0111123578899999999998

>1nd4_A Aminoglycoside 3'-phosphotransferase; protein kinase, ATPase, kanamycin; HET: KAN; 2.10A {Klebsiella pneumoniae} SCOP: d.144.1.6

Probab=97.23  E-value=0.00071  Score=46.90  Aligned_cols=106  Identities=11%  Similarity=0.035  Sum_probs=67.7

Q ss_pred             CCeeecceecccCCeeEEEEEEcCCCEEEEEEeeccCccchhHHHHHHHHHhcccccCCC--eeeeecceecCCCcccch
Q 039630           34 NGFRTSNKIGEGGFGSVYKGRLEDGTVVAVNVLSVESKQGETEFMSEVASMANINICHEN--LVKLHGGCIDGPSRILAP  111 (174)
Q Consensus        34 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~avK~~~~~~~~~~~~~~~e~~~l~~l~~~h~~--i~~~~~~~~~~~~~~lv~  111 (174)
                      ..+.+....+.|..+.||+....+|..+++|+....   ....+..|+.+++.+.  +.+  +.++++.....+..++++
T Consensus        20 ~~~~~~~~~~gg~~~~v~~~~~~~g~~~vlK~~~~~---~~~~~~~E~~~l~~l~--~~~~~vP~~~~~~~~~~~~~~v~   94 (264)
T 1nd4_A           20 FGYDWAQQTIGCSDAAVFRLSAQGRPVLFVKTDLSG---ALNELQDEAARLSWLA--TTGVPCAAVLDVVTEAGRDWLLL   94 (264)
T ss_dssp             TTCEEEECSCTTSSCEEEEEECTTSCCEEEEEECSC---TTSCHHHHHHHHHHHH--TTTCCBCCEEEEEECSSCEEEEE
T ss_pred             CCCceEecccCCCCceEEEEecCCCCeEEEEeCCcc---cchhhhHHHHHHHHHH--hCCCCCCeEEEeccCCCCCEEEE
Confidence            445554444466678999987666778999997533   3346788999998886  333  556777766655556666


Q ss_pred             hhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhcc
Q 039630          112 LQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEI  170 (174)
Q Consensus       112 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  170 (174)
                        ++.++..+.  . .                  ....   ..++.+++..|..||+..
T Consensus        95 --e~i~G~~l~--~-~------------------~~~~---~~~~~~l~~~l~~lh~~~  127 (264)
T 1nd4_A           95 --GEVPGQDLL--S-S------------------HLAP---AEKVSIMADAMRRLHTLD  127 (264)
T ss_dssp             --ECCSSEETT--T-S------------------CCCH---HHHHHHHHHHHHHHTTSC
T ss_pred             --EecCCcccC--c-C------------------cCCH---hHHHHHHHHHHHHHhCCC
Confidence              444443321  0 0                  0111   257888999999999753

>3dxp_A Putative acyl-COA dehydrogenase; protein kinase-like fold, structural genomics, joint center structural genomics, JCSG; 2.32A {Ralstonia eutropha JMP134}

Probab=97.06  E-value=0.0018  Score=47.44  Aligned_cols=114  Identities=12%  Similarity=0.072  Sum_probs=69.6

Q ss_pred             eeecceecccCCeeEEEEEEcCCCEEEEEEee--ccC-ccchhHHHHHHHHHhcccccCCCeeeeecceecCC---Cccc
Q 039630           36 FRTSNKIGEGGFGSVYKGRLEDGTVVAVNVLS--VES-KQGETEFMSEVASMANINICHENLVKLHGGCIDGP---SRIL  109 (174)
Q Consensus        36 ~~~~~~lg~G~~g~V~~~~~~~~~~~avK~~~--~~~-~~~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~~~~---~~~l  109 (174)
                      ....+.++.|.++.+|+.... +..+++|+..  ... ......+.+|..+++.+...+..+.+++..+...+   ..++
T Consensus        40 ~~~~~~l~~G~sn~~y~v~~~-~~~~vlr~~~~p~~~~~~~~~~~~~E~~~l~~L~~~~vpvP~~~~~~~~~~~~g~~~~  118 (359)
T 3dxp_A           40 PLSVEQFKGGQSNPTFKLVTP-GQTYVMRAKPGPKSKLLPSAHAIEREYRVMDALAGTDVPVAKMYALCEDESVIGRAFY  118 (359)
T ss_dssp             CCEEEECCC-CCSCEEEEECS-SCEEEEECCCC----------CHHHHHHHHHHHTTSSSCCCCEEEEECCTTTTSSCEE
T ss_pred             CceEEEcCCcccceEEEEEEC-CceEEEEeCCCCCCCCCCcHHHHHHHHHHHHHhhcCCCCCCcEEEECCCCCccCCeEE
Confidence            344678899999999998765 4578888775  221 12345688899999888622345777777765542   2344


Q ss_pred             chhhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhcc
Q 039630          110 APLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEI  170 (174)
Q Consensus       110 v~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  170 (174)
                      ++  ++.++..+..                  .....++......++.+++..|+.||+..
T Consensus       119 vm--e~v~G~~l~~------------------~~~~~l~~~~~~~~~~~l~~~La~LH~~~  159 (359)
T 3dxp_A          119 IM--EFVSGRVLWD------------------QSLPGMSPAERTAIYDEMNRVIAAMHTVD  159 (359)
T ss_dssp             EE--ECCCCBCCCC------------------TTCTTCCHHHHHHHHHHHHHHHHHHHHSC
T ss_pred             EE--EecCCeecCC------------------CccccCCHHHHHHHHHHHHHHHHHHhCCC
Confidence            44  3333322211                  01113566777889999999999999854

>4gkh_A Aminoglycoside 3'-phosphotransferase APHA1-IAB; pyrazolopyrimidine, 1-Na-PP1, bumped kinase inhibitor, BKI, kinase inhibitor; HET: KAN 0J9; 1.86A {Acinetobacter baumannii} PDB: 4feu_A* 4few_A* 4fex_A* 4fev_A* 4gki_A* 4ej7_A* 3r78_A*

Probab=95.12  E-value=0.079  Score=36.82  Aligned_cols=104  Identities=13%  Similarity=0.016  Sum_probs=65.8

Q ss_pred             eecccCCe-eEEEEE-EcCCCEEEEEEeeccCccchhHHHHHHHHHhcccccCCCeeeeecceecCCCcccchhhhhhhh
Q 039630           41 KIGEGGFG-SVYKGR-LEDGTVVAVNVLSVESKQGETEFMSEVASMANINICHENLVKLHGGCIDGPSRILAPLQASIEA  118 (174)
Q Consensus        41 ~lg~G~~g-~V~~~~-~~~~~~~avK~~~~~~~~~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~~~~~~~lv~~~~~~~~  118 (174)
                      .+..|..+ .||+-. ..++..+.+|.-+   ......+..|..+|+.+. .+-.+.+++..+...+..++++  +..++
T Consensus        31 ~~~~G~S~~~v~rl~~~~~~~~~~lk~~~---~~~~~~~~~E~~~l~~l~-~~vPVP~v~~~~~~~~~~~lvm--e~l~G  104 (272)
T 4gkh_A           31 RDNVGQSGATIYRLYGKPNAPELFLKHGK---GSVANDVTDEMVRLNWLT-AFMPLPTIKHFIRTPDDAWLLT--TAIPG  104 (272)
T ss_dssp             EEECSSSSCEEEEEECCTTCCCEEEEEEE---THHHHHHHHHHHHHHHHT-TTSCCCCEEEEEEETTEEEEEE--ECCCS
T ss_pred             EccCCCcCCeEEEEEecCCCeEEEEEECC---CCCHhHHHHHHHHHHHhc-cCCCcCeEEEEEEECCeEEEEE--EeeCC
Confidence            44556555 588766 3456678888865   234556788999988875 3455777788887777777777  55544


Q ss_pred             hhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhcc
Q 039630          119 LFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEI  170 (174)
Q Consensus       119 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  170 (174)
                      ..+.....                    ........++.+++..|.-||+.-
T Consensus       105 ~~~~~~~~--------------------~~~~~~~~~~~~l~~~L~~Lh~~~  136 (272)
T 4gkh_A          105 KTAFQVLE--------------------EYPDSGENIVDALAVFLRRLHSIP  136 (272)
T ss_dssp             EEHHHHHH--------------------HCGGGHHHHHHHHHHHHHHHHTSC
T ss_pred             cccccccc--------------------CCHHHHHHHHHHHHHHHHHhcCCC
Confidence            43332110                    011122357788899999999743

>3f7w_A Putative fructosamine-3-kinase; YP_290396.1, structural GENO joint center for structural genomics, JCSG, protein structu initiative, PSI-2; 1.85A {Thermobifida fusca YX}

Probab=94.71  E-value=0.11  Score=36.64  Aligned_cols=56  Identities=18%  Similarity=0.205  Sum_probs=44.5

Q ss_pred             cCCeeecceecccCCeeEEEEEEcCCCEEEEEEeeccCccchhHHHHHHHHHhccc
Q 039630           33 TNGFRTSNKIGEGGFGSVYKGRLEDGTVVAVNVLSVESKQGETEFMSEVASMANIN   88 (174)
Q Consensus        33 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~avK~~~~~~~~~~~~~~~e~~~l~~l~   88 (174)
                      ...+...+.+|.|..+.||+.+..+|+.+.+|+...........+..|...|+.+.
T Consensus        14 G~~v~~v~~~g~G~~~~vyrv~l~DG~~~~vK~~~~~~~~~~~~~~~Ea~~L~~L~   69 (288)
T 3f7w_A           14 GREVAAVAERGHSHRWHLYRVELADGTPLFVKALPDDAPALDGLFRAEALGLDWLG   69 (288)
T ss_dssp             CCCEEEEEEEEEETTEEEEEEEETTSCEEEEEECCTTCCCCTTHHHHHHHHHHHHT
T ss_pred             CCCeEEEEecCCCCCeEEEEEEECCCCEEEEEEeCCCCcchhhHHHHHHHHHHHHH
Confidence            34567778899999999999999999999999876554444556788988888764

>3tdw_A Gentamicin resistance protein; kinase, phosphoryl transfer, antibiotic resistance, transfer; HET: GDP; 1.70A {Enterococcus gallinarum} PDB: 3tdv_A*

Probab=93.44  E-value=0.4  Score=34.17  Aligned_cols=105  Identities=13%  Similarity=0.005  Sum_probs=63.7

Q ss_pred             cceecccCCeeEEEEEEcCCCEEEEEEeeccCccchhHHHHHHHHHhcccccC--CCeeeeeccee-cCCCcccchhhhh
Q 039630           39 SNKIGEGGFGSVYKGRLEDGTVVAVNVLSVESKQGETEFMSEVASMANINICH--ENLVKLHGGCI-DGPSRILAPLQAS  115 (174)
Q Consensus        39 ~~~lg~G~~g~V~~~~~~~~~~~avK~~~~~~~~~~~~~~~e~~~l~~l~~~h--~~i~~~~~~~~-~~~~~~lv~~~~~  115 (174)
                      .+.++.|....+|..    +..+++|+..  .......+..|..++..+. .+  -.+.+++.... ..+..++++  ++
T Consensus        24 v~~l~~G~~n~v~~v----g~~~VlR~~~--~~~~~~~~~~E~~~L~~L~-~~~~v~VP~~~~~~~~~~g~~~~v~--e~   94 (306)
T 3tdw_A           24 VESLGEGFRNYAILV----NGDWVFRFPK--SQQGADELNKEIQLLPLLV-GCVKVNIPQYVYIGKRSDGNPFVGY--RK   94 (306)
T ss_dssp             EEEEEECSSEEEEEE----TTTEEEEEES--SHHHHHHHHHHHHHHHHHT-TTCSSBCCCEEEEEECTTSCEEEEE--EC
T ss_pred             eeecCCCcceeEEEE----CCEEEEEecC--CchHHHHHHHHHHHHHHHH-hcCCCCCCCeEeecccCCCceEEEE--ec
Confidence            456788888888876    5568888853  2234567889999999886 12  12444444442 223344444  44


Q ss_pred             hhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhcc
Q 039630          116 IEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEI  170 (174)
Q Consensus       116 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  170 (174)
                      .++..+....                  ...++......++.+++..|+-||+-.
T Consensus        95 i~G~~l~~~~------------------~~~l~~~~~~~~~~~lg~~La~LH~~~  131 (306)
T 3tdw_A           95 VQGQILGEDG------------------MAVLPDDAKDRLALQLAEFMNELSAFP  131 (306)
T ss_dssp             CCSEECHHHH------------------HTTSCHHHHHHHHHHHHHHHHHHHHSC
T ss_pred             cCCeECchhh------------------hhhCCHHHHHHHHHHHHHHHHHHhcCC
Confidence            4433332210                  012455667788999999999999843

>3jr1_A Putative fructosamine-3-kinase; YP_719053.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 2.32A {Haemophilus somnus 129PT}

Probab=92.98  E-value=0.48  Score=34.04  Aligned_cols=72  Identities=14%  Similarity=0.083  Sum_probs=47.7

Q ss_pred             eeecceecccCCeeEEEEEEcCCCEEEEEEeeccCccchhHHHHHHHHHhccccc-CCCeeeeecceecCCCcccch
Q 039630           36 FRTSNKIGEGGFGSVYKGRLEDGTVVAVNVLSVESKQGETEFMSEVASMANINIC-HENLVKLHGGCIDGPSRILAP  111 (174)
Q Consensus        36 ~~~~~~lg~G~~g~V~~~~~~~~~~~avK~~~~~~~~~~~~~~~e~~~l~~l~~~-h~~i~~~~~~~~~~~~~~lv~  111 (174)
                      ....+.|+.|.+..+|+... ++..+.+|+....   ....+..|...|+.+... ...+.+++......+..++++
T Consensus        38 i~~~~~l~gG~~n~~y~v~~-~~~~~vlK~~~~~---~~~~~~~E~~~L~~L~~~~~v~VP~vl~~~~~~g~~~lvm  110 (312)
T 3jr1_A           38 IKHKEKLYSGEMNEIWLIND-EVQTVFVKINERS---YRSMFRAEADQLALLAKTNSINVPLVYGIGNSQGHSFLLL  110 (312)
T ss_dssp             CCEEEEECCSSSSEEEEEES-SSCEEEEEEEEGG---GHHHHHHHHHHHHHHHHTTSSBCCCEEEEEECSSEEEEEE
T ss_pred             eeeeEEeCCccceeeeEEEE-CCCeEEEEeCCcc---cHHHHHHHHHHHHHHHhhCCCCcceEEEEeecCCceEEEE
Confidence            44557889999999998775 3667888887532   355678888888877411 245666666665444444444

>3sg8_A APH(2'')-ID; antibiotic resistance enzyme, transferase, aminoglycoside, phosphorylation, transferase-antibiotic complex; HET: TOY; 1.80A {Enterococcus casseliflavus} PDB: 3sg9_A* 3n4v_A 3n4t_A 3n4u_A 3r81_A* 3r80_A* 3r7z_A* 3r82_A* 3vcq_A* 4dbx_A 4de4_A* 4dfb_A* 4dfu_A* 4dt9_A* 4dt8_A* 4dtb_A* 3sgc_A 4dta_A* 3lzh_A

Probab=92.75  E-value=0.49  Score=33.49  Aligned_cols=105  Identities=16%  Similarity=0.103  Sum_probs=61.0

Q ss_pred             cceecccCCeeEEEEEEcCCCEEEEEEeeccCccchhHHHHHHHHHhcccccCCC--eeeeecceecCC---Ccccchhh
Q 039630           39 SNKIGEGGFGSVYKGRLEDGTVVAVNVLSVESKQGETEFMSEVASMANINICHEN--LVKLHGGCIDGP---SRILAPLQ  113 (174)
Q Consensus        39 ~~~lg~G~~g~V~~~~~~~~~~~avK~~~~~~~~~~~~~~~e~~~l~~l~~~h~~--i~~~~~~~~~~~---~~~lv~~~  113 (174)
                      ++.++.|.+..||+.    +..+++|+....  .....+.+|..+++.+. .+..  +..++......+   ..++++  
T Consensus        25 i~~~~~G~~n~v~~v----~~~~vlR~~~~~--~~~~~~~~E~~~l~~l~-~~~~v~vP~~~~~~~~~~~~~~~~~vm--   95 (304)
T 3sg8_A           25 IEISGEGNDCIAYEI----NRDFIFKFPKHS--RGSTNLFNEVNILKRIH-NKLPLPIPEVVFTGMPSETYQMSFAGF--   95 (304)
T ss_dssp             CCEEEECSSEEEEES----TTSEEEEEESSH--HHHHHHHHHHHHHHHHT-TSSSSCCCCEEEECCCCSSCSCSCEEE--
T ss_pred             eEecCCCCcceEEEE----CCEEEEEecCCc--chHHHHHHHHHHHHHHH-hcCCCCCCceEeecCCCCCCCcceEEE--
Confidence            466889999998875    245888886422  33567889999988773 1322  333333322221   112222  


Q ss_pred             hhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhcc
Q 039630          114 ASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEI  170 (174)
Q Consensus       114 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  170 (174)
                      ++.++..+....                  ...++......++.+++..|+.||+-.
T Consensus        96 ~~i~G~~l~~~~------------------~~~l~~~~~~~~~~~l~~~la~LH~~~  134 (304)
T 3sg8_A           96 TKIKGVPLTPLL------------------LNNLPKQSQNQAAKDLARFLSELHSIN  134 (304)
T ss_dssp             ECCCCEECCHHH------------------HHTSCHHHHHHHHHHHHHHHHHHHHSC
T ss_pred             cccCCeECCccc------------------cccCCHHHHHHHHHHHHHHHHHHHcCC
Confidence            333332221110                  113566677789999999999999843

>3ats_A Putative uncharacterized protein; hypothetical protein, putative aminoglycoside phosphortransf transferase; 1.67A {Mycobacterium tuberculosis} PDB: 3att_A*

Probab=92.64  E-value=0.33  Score=35.20  Aligned_cols=123  Identities=7%  Similarity=-0.044  Sum_probs=65.0

Q ss_pred             eeeccee-cccCCeeEEEEEEc-------CCCEEEEEEeeccC---ccchhHHHHHHHHHhccccc-CCCeeeeecceec
Q 039630           36 FRTSNKI-GEGGFGSVYKGRLE-------DGTVVAVNVLSVES---KQGETEFMSEVASMANINIC-HENLVKLHGGCID  103 (174)
Q Consensus        36 ~~~~~~l-g~G~~g~V~~~~~~-------~~~~~avK~~~~~~---~~~~~~~~~e~~~l~~l~~~-h~~i~~~~~~~~~  103 (174)
                      ....+.| +.|....+|+....       ++..+++|+.....   ......+..|+.+++.+... ...+.+++..+..
T Consensus        22 v~~~~~l~~~G~~n~~y~v~~~~~~~~~~~~~~~vlR~~~~~~~~~~~~~~~~~~E~~~l~~L~~~~~vpvP~v~~~~~~  101 (357)
T 3ats_A           22 VTVESGVDSTGMSSETIILTARWQQDGRSIQQKLVARVAPAAEDVPVFPTYRLDHQFEVIRLVGELTDVPVPRVRWIETT  101 (357)
T ss_dssp             EEEEEEECTTSSEEEEEEEEEEEEETTEEEEEEEEEEECCCGGGCCSSSCCCHHHHHHHHHHHHHHCCSCCCCEEEEECS
T ss_pred             eEEEEECCCCCccceEEEEEEecccCCCCCCceEEEEeCCCCCccccCchhHHHHHHHHHHHHhhcCCCCCCcEEEEccC
Confidence            3345677 78888899987643       25678888765322   11234678888888877511 1345566665543


Q ss_pred             CC---CcccchhhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhcc
Q 039630          104 GP---SRILAPLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEI  170 (174)
Q Consensus       104 ~~---~~~lv~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  170 (174)
                      .+   ..++++  ++.++..+...+ +.       ...  ......++......++.+++..|+-||+..
T Consensus       102 ~~~~g~~~~v~--e~l~G~~l~~~~-~~-------~~~--~~~~~~~~~~~~~~~~~~l~~~La~LH~~~  159 (357)
T 3ats_A          102 GDVLGTPFFLM--DYVEGVVPPDVM-PY-------TFG--DNWFADAPAERQRQLQDATVAALATLHSIP  159 (357)
T ss_dssp             STTTSSCEEEE--ECCCCBCCCBTT-BG-------GGS--CSTTTTSCHHHHHHHHHHHHHHHHHHTTCS
T ss_pred             CCccCCceEEE--EecCCCChhhcC-cc-------ccc--ccccCCCCHHHHHHHHHHHHHHHHHHhCCC
Confidence            31   223333  333222211100 00       000  000002344555678889999999999743

>2olc_A MTR kinase, methylthioribose kinase; kinase ADP-2HO complex, transferase; HET: CPS ADP; 2.00A {Bacillus subtilis} SCOP: d.144.1.6 PDB: 2pu8_A* 2pui_A* 2pul_A* 2pun_A* 2pup_A*

Probab=90.63  E-value=0.27  Score=36.29  Aligned_cols=76  Identities=9%  Similarity=0.064  Sum_probs=43.9

Q ss_pred             cceecccCCeeEEEEEE-cCCCEEEEEEeeccC-------ccchhHHHHHHHHHhccccc-CCCeeeeecceecCCCccc
Q 039630           39 SNKIGEGGFGSVYKGRL-EDGTVVAVNVLSVES-------KQGETEFMSEVASMANINIC-HENLVKLHGGCIDGPSRIL  109 (174)
Q Consensus        39 ~~~lg~G~~g~V~~~~~-~~~~~~avK~~~~~~-------~~~~~~~~~e~~~l~~l~~~-h~~i~~~~~~~~~~~~~~l  109 (174)
                      .+.+|.|.++.||++.. .++..+++|......       ......+..|..++..+... ...+.+++..  +.+..++
T Consensus        35 ~~~lg~G~~n~vyrv~~~~~~~~~vvK~~~~~~r~~~~~~~~~~~r~~~E~~~L~~l~~~~~~~vP~~~~~--d~~~~~l  112 (397)
T 2olc_A           35 CQEIGDGNLNYVFHIYDQEHDRALIIKQAVPYAKVVGESWPLTIDRARIESSALIRQGEHVPHLVPRVFYS--DTEMAVT  112 (397)
T ss_dssp             EEECCSSSSEEEEEEEC----CEEEEEEECCC-------CCCCTTHHHHHHHHHHHHHTTCGGGSCCEEEE--ETTTTEE
T ss_pred             EEECCCCceEEEEEEEECCCCcEEEEEecchhhcccCCCCcCcHHHHHHHHHHHHHhhhhCCCCcCeEEEE--cCCccEE
Confidence            56899999999999974 346789999865321       12334567888888876410 1223344432  2344455


Q ss_pred             chhhhhhhh
Q 039630          110 APLQASIEA  118 (174)
Q Consensus       110 v~~~~~~~~  118 (174)
                      ++  ++.++
T Consensus       113 vm--E~l~g  119 (397)
T 2olc_A          113 VM--EDLSH  119 (397)
T ss_dssp             EE--CCCTT
T ss_pred             EE--EeCCC
Confidence            55  44443

>3cxl_A N-chimerin; SH2, RHO-GAP, structural genomics consortium, SGC, gtpas activation, metal-binding, phorbol-ester binding, SH2 domai finger; 2.60A {Homo sapiens} PDB: 1xa6_A

Probab=89.62  E-value=0.032  Score=42.49  Aligned_cols=62  Identities=11%  Similarity=0.111  Sum_probs=18.1

Q ss_pred             eecceecccCCeeEEEEEEcC-CCEEEE------EEeecc--CccchhHHHHHHHHHhcccccCCCeeeeecceec
Q 039630           37 RTSNKIGEGGFGSVYKGRLED-GTVVAV------NVLSVE--SKQGETEFMSEVASMANINICHENLVKLHGGCID  103 (174)
Q Consensus        37 ~~~~~lg~G~~g~V~~~~~~~-~~~~av------K~~~~~--~~~~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~~  103 (174)
                      .+.+.+|   ||.||++.+.. ..+||+      |..+..  ..+....+.+|..++..++  |+|+++.+++...
T Consensus       145 ~l~~~lG---fG~v~~g~~~~~~~~Vav~~~~~~K~~~~~~~~~e~~~~~~rea~l~~~~~--H~niv~~h~f~~~  215 (463)
T 3cxl_A          145 PIYEHVG---YTTLNREPAYKKHMPVLKETHDERDSTGQDGVSEKRLTSLVRRATLKENEQ--IPKYEKIHNFKVH  215 (463)
T ss_dssp             CSTTTSS---BCCC---------CCBGGGC-------------------------------------CBCCCEEEE
T ss_pred             cccccCC---chhhhcccccccCCchhhhhccCcccccccccccccccccccccccccccc--ccccCCCcceEEe
Confidence            3446666   99999999653 357888      665432  1233446778888888888  9999998877644

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	174
d1qpca_	272	d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Hom	5e-23
d1t46a_	311	d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens	1e-22
d1opja_	287	d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mou	8e-21
d1s9ja_	322	d.144.1.7 (A:) Dual specificity mitogen-activated	8e-21
d1sm2a_	263	d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Hu	4e-20
d1u5ra_	309	d.144.1.7 (A:) Serine/threonine protein kinase TAO	1e-19
d1fvra_	309	d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [	1e-19
d1k2pa_	258	d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Hum	1e-19
d1fmka3	285	d.144.1.7 (A:249-533) c-src tyrosine kinase {Human	3e-19
d2jfla1	288	d.144.1.7 (A:21-308) STE20-like serine/threonine-p	4e-19
d1jpaa_	299	d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mou	6e-19
d1uwha_	276	d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens)	1e-18
d1yhwa1	293	d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [	3e-18
d1lufa_	301	d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus n	5e-18
d1byga_	262	d.144.1.7 (A:) Carboxyl-terminal src kinase (csk)	6e-18
d1koba_	352	d.144.1.7 (A:) Twitchin, kinase domain {California	1e-17
d1u59a_	285	d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Hum	2e-17
d1ywna1	299	d.144.1.7 (A:818-1166) Vascular endothelial growth	2e-17
d1q5ka_	350	d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gs	2e-17
d1koaa2	350	d.144.1.7 (A:5915-6264) Twitchin, kinase domain {C	3e-17
d1rjba_	325	d.144.1.7 (A:) Fl cytokine receptor {Human (Homo s	3e-17
d2j4za1	263	d.144.1.7 (A:126-388) Aurora-related kinase 1 (aur	6e-17
d1u46a_	273	d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Hum	2e-16
d1fgka_	299	d.144.1.7 (A:) Fibroblast growth factor receptor 1	2e-16
d1xbba_	277	d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human	4e-16
d1vjya_	303	d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human	5e-16
d1pmea_	345	d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapien	5e-16
d1nvra_	271	d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {	6e-16
d1mqba_	283	d.144.1.7 (A:) epha2 receptor tyrosine kinase {Hum	6e-16
d1xkka_	317	d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-	1e-15
d1ob3a_	286	d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmod	2e-15
d2java1	269	d.144.1.7 (A:3-271) Serine/threonine-protein kinas	2e-15
d1mp8a_	273	d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Huma	2e-15
d1omwa3	364	d.144.1.7 (A:186-549) G-protein coupled receptor k	4e-15
d1r0pa_	311	d.144.1.7 (A:) Hepatocyte growth factor receptor,	7e-15
d1p4oa_	308	d.144.1.7 (A:) Insulin-like growth factor 1 recept	9e-15
d1cm8a_	346	d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo s	1e-14
d1ua2a_	299	d.144.1.7 (A:) Cell division protein kinase 7, CDK	1e-14
d1blxa_	305	d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (H	3e-14
d1tkia_	321	d.144.1.7 (A:) Titin, kinase domain {Human (Homo s	4e-14
d1gz8a_	298	d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (H	4e-14
d1xwsa_	273	d.144.1.7 (A:) Proto-oncogene serine/threonine-pro	6e-14
d1o6ya_	277	d.144.1.7 (A:) Mycobacterial protein kinase PknB,	6e-14
d2gfsa1	348	d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sa	7e-14
d1ckia_	299	d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus n	1e-13
d1a06a_	307	d.144.1.7 (A:) Calmodulin-dependent protein kinase	2e-13
d1uu3a_	288	d.144.1.7 (A:) 3-phosphoinositide dependent protei	2e-13
d1fota_	316	d.144.1.7 (A:) cAMP-dependent PK, catalytic subuni	2e-13
d1t4ha_	270	d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sa	3e-13
d1o6la_	337	d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sap	8e-13
d1phka_	277	d.144.1.7 (A:) gamma-subunit of glycogen phosphory	1e-12
d3bqca1	328	d.144.1.7 (A:3-330) Protein kinase CK2, alpha subu	2e-12
d3blha1	318	d.144.1.7 (A:8-325) Cell division protein kinase 9	2e-12
d1xjda_	320	d.144.1.7 (A:) Protein kinase C, theta type {Human	3e-12
d1rdqe_	350	d.144.1.7 (E:) cAMP-dependent PK, catalytic subuni	4e-12
d1jksa_	293	d.144.1.7 (A:) Death-associated protein kinase, Da	7e-12
d1unla_	292	d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (H	8e-12
d1q8ya_	362	d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces	1e-10
d2b1pa1	355	d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3	1e-10
d2ozaa1	335	d.144.1.7 (A:51-385) MAP kinase activated protein	4e-10
d1csna_	293	d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast	6e-10
d1vzoa_	322	d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5	8e-10
d1zara2	191	d.144.1.9 (A:91-281) Rio2 serine protein kinase C-	3e-09

>d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]} Length = 272

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Lymphocyte kinase (lck)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 90.1 bits (223), Expect = 5e-23
 Identities = 28/138 (20%), Positives = 52/138 (37%), Gaps = 20/138 (14%)

Query: 31  IATNGFRTSNKIGEGGFGSVYKGRLEDGTVVAVNVLSVESKQGETEFMSEVASMANINIC 90
           +     +   ++G G FG V+ G     T VAV  L  +       F++E   M  +   
Sbjct: 10  VPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLK-QGSMSPDAFLAEANLMKQLQ-- 66

Query: 91  HENLVKLHGGCIDGPSRILAPLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWI 150
           H+ LV+L+      P             +++ T+  +    +          + +K    
Sbjct: 67  HQRLVRLYAVVTQEP-------------IYIITEYMENGSLVDFL----KTPSGIKLTIN 109

Query: 151 ARREIALGIARGLAYIHE 168
              ++A  IA G+A+I E
Sbjct: 110 KLLDMAAQIAEGMAFIEE 127

>d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 311

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-KIT receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 89.5 bits (221), Expect = 1e-22
 Identities = 29/156 (18%), Positives = 61/156 (39%), Gaps = 9/156 (5%)

Query: 22  SKISYN-ELKIATNGFRTSNKIGEGGFGSVYKGRL------EDGTVVAVNVLSVESKQGE 74
           +++ Y+ + +   N       +G G FG V +         +    VAV +L   +   E
Sbjct: 10  TQLPYDHKWEFPRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTE 69

Query: 75  TE-FMSEVASMANINICHENLVKLHGGCIDGPSRILAPLQASIEALFLFTKLWKMDKFIS 133
            E  MSE+  ++ +   H N+V L G C  G   ++         L  F +  +     S
Sbjct: 70  REALMSELKVLSYLG-NHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICS 128

Query: 134 IYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEE 169
               +  + + +  +       +  +A+G+A++  +
Sbjct: 129 KTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASK 164

>d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]} Length = 287

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Abelsone tyrosine kinase (abl)
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 84.4 bits (208), Expect = 8e-21
 Identities = 34/148 (22%), Positives = 62/148 (41%), Gaps = 20/148 (13%)

Query: 22  SKISYNELKIATNGFRTSNKIGEGGFGSVYKGRLED-GTVVAVNVLSVESKQGETEFMSE 80
           S  +Y++ ++        +K+G G +G VY+G  +     VAV  L  ++ + E EF+ E
Sbjct: 5   SSPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKE 63

Query: 81  VASMANINICHENLVKLHGGCIDGPSRILAPLQASIEALFLFTKLWKMDKFISIYVVSGS 140
            A M  I   H NLV+L G C   P              ++ T+       +        
Sbjct: 64  AAVMKEIK--HPNLVQLLGVCTREPP------------FYIITEFMTYGNLLDYLR---- 105

Query: 141 KKNRVKFNWIARREIALGIARGLAYIHE 168
           + NR + + +    +A  I+  + Y+ +
Sbjct: 106 ECNRQEVSAVVLLYMATQISSAMEYLEK 133

>d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 85.1 bits (210), Expect = 8e-21
 Identities = 23/147 (15%), Positives = 54/147 (36%), Gaps = 30/147 (20%)

Query: 29  LKIATNGFRTSNKIGEGGFGSVYKGR-LEDGTVVAVNVLSVESKQG-ETEFMSEVASMAN 86
           +++  + F   +++G G  G V+K      G V+A  ++ +E K     + + E+  +  
Sbjct: 1   MELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHE 60

Query: 87  INICHENLVKLHGGCIDGPSRILAPLQASIEALFLFTKLWKMDKFISIYVVSGS----KK 142
            N     +V  +G         +                  M+     ++  GS     K
Sbjct: 61  CN--SPYIVGFYGAFYSDGEISIC-----------------ME-----HMDGGSLDQVLK 96

Query: 143 NRVKFNWIARREIALGIARGLAYIHEE 169
              +       ++++ + +GL Y+ E+
Sbjct: 97  KAGRIPEQILGKVSIAVIKGLTYLREK 123

>d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]} Length = 263

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase Itk/Tsk
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 82.4 bits (203), Expect = 4e-20
 Identities = 29/133 (21%), Positives = 48/133 (36%), Gaps = 20/133 (15%)

Query: 36  FRTSNKIGEGGFGSVYKGRLEDGTVVAVNVLSVESKQGETEFMSEVASMANINICHENLV 95
                +IG G FG V+ G   +   VA+  +  E    E +F+ E   M  ++  H  LV
Sbjct: 7   LTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIR-EGAMSEEDFIEEAEVMMKLS--HPKLV 63

Query: 96  KLHGGCIDGPSRILAPLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREI 155
           +L+G C++     L         L  +                  +  R  F       +
Sbjct: 64  QLYGVCLEQAPICLVFEFMEHGCLSDYL-----------------RTQRGLFAAETLLGM 106

Query: 156 ALGIARGLAYIHE 168
            L +  G+AY+ E
Sbjct: 107 CLDVCEGMAYLEE 119

>d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 309

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine protein kinase TAO2
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 81.6 bits (201), Expect = 1e-19
 Identities = 29/137 (21%), Positives = 50/137 (36%), Gaps = 24/137 (17%)

Query: 36  FRTSNKIGEGGFGSVYKGR-LEDGTVVAVNVLSVESKQGET---EFMSEVASMANINICH 91
           F    +IG G FG+VY  R + +  VVA+  +S   KQ      + + EV  +  +   H
Sbjct: 17  FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLR--H 74

Query: 92  ENLVKLHGGCIDGPSRILAPLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIA 151
            N ++  G  +   +  L        A  L                   + ++     + 
Sbjct: 75  PNTIQYRGCYLREHTAWLVMEYCLGSASDLL------------------EVHKKPLQEVE 116

Query: 152 RREIALGIARGLAYIHE 168
              +  G  +GLAY+H 
Sbjct: 117 IAAVTHGALQGLAYLHS 133

>d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 309

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tie2 kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 81.4 bits (200), Expect = 1e-19
 Identities = 30/152 (19%), Positives = 54/152 (35%), Gaps = 14/152 (9%)

Query: 21  FSKISYNELKIATNGFRTSNKIGEGGFGSVYKGRLEDG---TVVAVNVLS-VESKQGETE 76
           +  + +N++K         + IGEG FG V K R++        A+  +    SK    +
Sbjct: 4   YPVLDWNDIKF-------QDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRD 56

Query: 77  FMSEVASMANINICHENLVKLHGGCIDGPSRILAPLQASIEALFLFTKLWKMDKFISIYV 136
           F  E+  +  +   H N++ L G C       L           L   L K     +   
Sbjct: 57  FAGELEVLCKLG-HHPNIINLLGACEHRGYLYL--AIEYAPHGNLLDFLRKSRVLETDPA 113

Query: 137 VSGSKKNRVKFNWIARREIALGIARGLAYIHE 168
            + +       +       A  +ARG+ Y+ +
Sbjct: 114 FAIANSTASTLSSQQLLHFAADVARGMDYLSQ 145

>d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]} Length = 258

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Bruton's tyrosine kinase (Btk)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 80.5 bits (198), Expect = 1e-19
 Identities = 28/132 (21%), Positives = 51/132 (38%), Gaps = 20/132 (15%)

Query: 36  FRTSNKIGEGGFGSVYKGRLEDGTVVAVNVLSVESKQGETEFMSEVASMANINICHENLV 95
                ++G G FG V  G+      VA+ ++  E    E EF+ E   M N++  HE LV
Sbjct: 6   LTFLKELGTGQFGVVKYGKWRGQYDVAIKMIK-EGSMSEDEFIEEAKVMMNLS--HEKLV 62

Query: 96  KLHGGCIDGPSRILAPLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREI 155
           +L+G C                 +F+ T+       ++       ++ R +F      E+
Sbjct: 63  QLYGVCTKQRP------------IFIITEYMANGCLLNYL-----REMRHRFQTQQLLEM 105

Query: 156 ALGIARGLAYIH 167
              +   + Y+ 
Sbjct: 106 CKDVCEAMEYLE 117

>d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-src tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 80.1 bits (197), Expect = 3e-19
 Identities = 29/146 (19%), Positives = 52/146 (35%), Gaps = 20/146 (13%)

Query: 22  SKISYNELKIATNGFRTSNKIGEGGFGSVYKGRLEDGTVVAVNVLSVESKQGETEFMSEV 81
             ++ +  +I     R   K+G+G FG V+ G     T VA+  L          F+ E 
Sbjct: 5   QGLAKDAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLK-PGTMSPEAFLQEA 63

Query: 82  ASMANINICHENLVKLHGGCIDGPSRILAPLQASIEALFLFTKLWKMDKFISIYVVSGSK 141
             M  +   HE LV+L+    + P             +++ T+       +         
Sbjct: 64  QVMKKLR--HEKLVQLYAVVSEEP-------------IYIVTEYMSKGSLLDFLK----G 104

Query: 142 KNRVKFNWIARREIALGIARGLAYIH 167
           +           ++A  IA G+AY+ 
Sbjct: 105 ETGKYLRLPQLVDMAAQIASGMAYVE 130

>d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]} Length = 288

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: STE20-like serine/threonine-protein kinase, SLK
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 80.0 bits (197), Expect = 4e-19
 Identities = 23/134 (17%), Positives = 51/134 (38%), Gaps = 20/134 (14%)

Query: 36  FRTSNKIGEGGFGSVYKGR-LEDGTVVAVNVLSVESKQGETEFMSEVASMANINICHENL 94
           +    ++G+G FG VYK +  E   + A  V+  +S++   ++M E+  +A+ +  H N+
Sbjct: 14  WEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCD--HPNI 71

Query: 95  VKLHGGCIDGPSRILAPLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARRE 154
           VKL        +            L++  +        ++       +          + 
Sbjct: 72  VKLLDAFYYENN------------LWILIEFCAGGAVDAVM-----LELERPLTESQIQV 114

Query: 155 IALGIARGLAYIHE 168
           +       L Y+H+
Sbjct: 115 VCKQTLDALNYLHD 128

>d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: ephb2 receptor tyrosine kinase
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 79.4 bits (195), Expect = 6e-19
 Identities = 31/157 (19%), Positives = 56/157 (35%), Gaps = 33/157 (21%)

Query: 25  SYNELKIATNGF---------RTSNKIGEGGFGSVYKGRL----EDGTVVAVNVLSVE-S 70
           ++ +   A   F         +    IG G FG V  G L    +    VA+  L    +
Sbjct: 8   TFEDPNEAVREFAKEIDISCVKIEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYT 67

Query: 71  KQGETEFMSEVASMANINICHENLVKLHGGCIDGPSRILAPLQASIEALFLFTKLWKMDK 130
           ++   +F+SE + M   +  H N++ L G                   + + T+  +   
Sbjct: 68  EKQRRDFLSEASIMGQFD--HPNVIHLEGVVTKS------------TPVMIITEFMENGS 113

Query: 131 FISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIH 167
             S       ++N  +F  I    +  GIA G+ Y+ 
Sbjct: 114 LDSFL-----RQNDGQFTVIQLVGMLRGIAAGMKYLA 145

>d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 276

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: B-Raf kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 78.5 bits (193), Expect = 1e-18
 Identities = 30/142 (21%), Positives = 48/142 (33%), Gaps = 30/142 (21%)

Query: 31  IATNGFRTSNKIGEGGFGSVYKGRLEDGTVVAVNVLSVESKQGETEFMSEVASMANINIC 90
           I         +IG G FG+VYKG+      V +  ++  + Q    F +EV  +      
Sbjct: 5   IPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTR-- 62

Query: 91  HENLVKLHGGCIDGPSRILAPLQASIEALFLFTKLWKMDKFISIYVVSGS-----KKNRV 145
           H N++   G                   L + T+          +    S          
Sbjct: 63  HVNILLFMGYSTAPQ-------------LAIVTQ----------WCEGSSLYHHLHIIET 99

Query: 146 KFNWIARREIALGIARGLAYIH 167
           KF  I   +IA   A+G+ Y+H
Sbjct: 100 KFEMIKLIDIARQTAQGMDYLH 121

>d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: pak1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 77.3 bits (190), Expect = 3e-18
 Identities = 18/134 (13%), Positives = 45/134 (33%), Gaps = 22/134 (16%)

Query: 36  FRTSNKIGEGGFGSVYKGR-LEDGTVVAVNVLSVESKQGETEFMSEVASMANINICHENL 94
           +    KIG+G  G+VY    +  G  VA+  ++++ +  +   ++E+  M      + N+
Sbjct: 22  YTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENK--NPNI 79

Query: 95  VKLHGGCIDGPSRILAPLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARRE 154
           V      + G            + L++  +         +             +      
Sbjct: 80  VNYLDSYLVG------------DELWVVMEYLAGGSLTDVV-------TETCMDEGQIAA 120

Query: 155 IALGIARGLAYIHE 168
           +     + L ++H 
Sbjct: 121 VCRECLQALEFLHS 134

>d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 301

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Musk tyrosine kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 77.2 bits (189), Expect = 5e-18
 Identities = 43/157 (27%), Positives = 62/157 (39%), Gaps = 15/157 (9%)

Query: 25  SYNELKIATNGFRTSNKIGEGGFGSVYKGRL------EDGTVVAVNVLSVE-SKQGETEF 77
               L+   N       IGEG FG V++ R       E  T+VAV +L  E S   + +F
Sbjct: 4   KLLSLEYPRNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADF 63

Query: 78  MSEVASMANINICHENLVKLHGGCIDGPSRILAPLQASIEALFLFTKLWKMDKFISIYVV 137
             E A MA  +  + N+VKL G C  G    L     +   L  F +        S+   
Sbjct: 64  QREAALMAEFD--NPNIVKLLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHS 121

Query: 138 SGSKKNR------VKFNWIARREIALGIARGLAYIHE 168
             S + R         +   +  IA  +A G+AY+ E
Sbjct: 122 DLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSE 158

>d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]} Length = 262

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Carboxyl-terminal src kinase (csk)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 76.2 bits (187), Expect = 6e-18
 Identities = 23/133 (17%), Positives = 46/133 (34%), Gaps = 20/133 (15%)

Query: 36  FRTSNKIGEGGFGSVYKGRLEDGTVVAVNVLSVESKQGETEFMSEVASMANINICHENLV 95
            +    IG+G FG V  G    G  VAV  +   +      F++E + M  +   H NLV
Sbjct: 9   LKLLQTIGKGEFGDVMLGDY-RGNKVAVKCIK--NDATAQAFLAEASVMTQLR--HSNLV 63

Query: 96  KLHGGCIDGPSRILAPLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREI 155
           +L G  ++    +    +        +     +  ++         + R         + 
Sbjct: 64  QLLGVIVEEKGGLYIVTE--------YMAKGSLVDYL-------RSRGRSVLGGDCLLKF 108

Query: 156 ALGIARGLAYIHE 168
           +L +   + Y+  
Sbjct: 109 SLDVCEAMEYLEG 121

>d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]} Length = 352

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]

 Score = 76.3 bits (187), Expect = 1e-17
 Identities = 21/139 (15%), Positives = 43/139 (30%), Gaps = 30/139 (21%)

Query: 36  FRTSNKIGEGGFGSVYKGR-LEDGTVVAVNVLSVESKQGETEFMSEVASMANINICHENL 94
           +    ++G G FG V++      G V     ++      +    +E++ M  ++  H  L
Sbjct: 31  YDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLH--HPKL 88

Query: 95  VKLHGGCIDGPSRILAPLQASIEALFLFTKLWKMDKFISIYVVSGS-----KKNRVKFNW 149
           + LH    D    +L                  ++     ++  G           K + 
Sbjct: 89  INLHDAFEDKYEMVLI-----------------LE-----FLSGGELFDRIAAEDYKMSE 126

Query: 150 IARREIALGIARGLAYIHE 168
                       GL ++HE
Sbjct: 127 AEVINYMRQACEGLKHMHE 145

>d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase ZAP-70
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 75.1 bits (184), Expect = 2e-17
 Identities = 28/150 (18%), Positives = 54/150 (36%), Gaps = 35/150 (23%)

Query: 28  ELKIATNGFRTSN-KIGEGGFGSVYKGRL---EDGTVVAVNVLSVESKQGETE-FMSEVA 82
           +L +  +    ++ ++G G FGSV +G     +    VA+ VL   +++ +TE  M E  
Sbjct: 2   KLFLKRDNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQ 61

Query: 83  SMANINICHENLVKLHGGCIDGPSRILAPLQASIEALFLFTKLWKMDKFISIYVVSGS-- 140
            M  ++  +  +V+L G C                 L L  +              G   
Sbjct: 62  IMHQLD--NPYIVRLIGVCQAEA-------------LMLVME----------MAGGGPLH 96

Query: 141 ---KKNRVKFNWIARREIALGIARGLAYIH 167
                 R +       E+   ++ G+ Y+ 
Sbjct: 97  KFLVGKREEIPVSNVAELLHQVSMGMKYLE 126

>d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Vascular endothelial growth factor receptor 2 (kdr)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 75.3 bits (184), Expect = 2e-17
 Identities = 27/145 (18%), Positives = 50/145 (34%), Gaps = 9/145 (6%)

Query: 31  IATNGFRTSNKIGEGGFGSVYKGR------LEDGTVVAVNVLSVESKQGE-TEFMSEVAS 83
              +  +    +G G FG V +              VAV +L   +   E    MSE+  
Sbjct: 10  FPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKI 69

Query: 84  MANINICHENLVKLHGGCIDGPSRILAPLQASIEALFLFTKLWKMDKFISIYVVSGSKKN 143
           + +I   H N+V L G C      ++  ++   +   L T L         Y V+     
Sbjct: 70  LIHIG-HHLNVVNLLGACTKPGGPLMVIVE-FCKFGNLSTYLRSKRNEFVPYKVAPEDLY 127

Query: 144 RVKFNWIARREIALGIARGLAYIHE 168
           +           +  +A+G+ ++  
Sbjct: 128 KDFLTLEHLICYSFQVAKGMEFLAS 152

>d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Glycogen synthase kinase-3 beta (Gsk3b)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 75.6 bits (185), Expect = 2e-17
 Identities = 28/134 (20%), Positives = 53/134 (39%), Gaps = 16/134 (11%)

Query: 36  FRTSNKIGEGGFGSVYKGRL-EDGTVVAVNVLSVESKQGETEFMSEVASMANINICHENL 94
           +  +  IG G FG VY+ +L + G +VA+  +     Q +     E+  M  ++  H N+
Sbjct: 22  YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV----LQDKRFKNRELQIMRKLD--HCNI 75

Query: 95  VKLHGGCIDGPSRILAPLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARRE 154
           V+L         +         + ++L   L  + + +       S+  +     I  + 
Sbjct: 76  VRLRYFFYSSGEK--------KDEVYLNLVLDYVPETVYRVARHYSRAKQ-TLPVIYVKL 126

Query: 155 IALGIARGLAYIHE 168
               + R LAYIH 
Sbjct: 127 YMYQLFRSLAYIHS 140

>d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: Caenorhabditis elegans, pjk4 [TaxId: 6239]

 Score = 75.5 bits (185), Expect = 3e-17
 Identities = 24/136 (17%), Positives = 47/136 (34%), Gaps = 20/136 (14%)

Query: 34  NGFRTSNKIGEGGFGSVYKGR-LEDGTVVAVNVLSVESKQGETEFMSEVASMANINICHE 92
           + +    ++G G FG V++      G   A   +    +  +     E+ +M+ +   H 
Sbjct: 26  DHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLR--HP 83

Query: 93  NLVKLHGGCIDGPSRILAPLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIAR 152
            LV LH    D    ++  +   +    LF K+                    K +    
Sbjct: 84  TLVNLHDAFEDDNEMVM--IYEFMSGGELFEKVA---------------DEHNKMSEDEA 126

Query: 153 REIALGIARGLAYIHE 168
            E    + +GL ++HE
Sbjct: 127 VEYMRQVCKGLCHMHE 142

>d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 325

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fl cytokine receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 75.2 bits (184), Expect = 3e-17
 Identities = 31/145 (21%), Positives = 49/145 (33%), Gaps = 13/145 (8%)

Query: 36  FRTSNKIGEGGFGSVYKGRLED------GTVVAVNVLSVESKQGETE-FMSEVASMANIN 88
                 +G G FG V                VAV +L  ++   E E  MSE+  M  + 
Sbjct: 39  LEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLG 98

Query: 89  ICHENLVKLHGGCIDGPSRILAPLQASIEALF--LFTKLWKMDKFISIYVVSG---SKKN 143
             HEN+V L G C       L         L   L +K  K  +    Y        +++
Sbjct: 99  -SHENIVNLLGACTLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEED 157

Query: 144 RVKFNWIARREIALGIARGLAYIHE 168
                +      A  +A+G+ ++  
Sbjct: 158 LNVLTFEDLLCFAYQVAKGMEFLEF 182

>d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 263

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Aurora-related kinase 1 (aurora-2)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 73.5 bits (180), Expect = 6e-17
 Identities = 28/137 (20%), Positives = 51/137 (37%), Gaps = 24/137 (17%)

Query: 36  FRTSNKIGEGGFGSVYKGRL-EDGTVVAVNVLS---VESKQGETEFMSEVASMANINICH 91
           F     +G+G FG+VY  R  +   ++A+ VL    +E    E +   EV   +++   H
Sbjct: 8   FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR--H 65

Query: 92  ENLVKLHGGCIDGPSRILAPLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIA 151
            N+++L+G   D     L    A +  ++   +                     KF+   
Sbjct: 66  PNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLS------------------KFDEQR 107

Query: 152 RREIALGIARGLAYIHE 168
                  +A  L+Y H 
Sbjct: 108 TATYITELANALSYCHS 124

>d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Activated CDC42 kinase 1, ACK1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 72.5 bits (177), Expect = 2e-16
 Identities = 30/140 (21%), Positives = 58/140 (41%), Gaps = 27/140 (19%)

Query: 36  FRTSNKIGEGGFGSVYKGRLE----DGTVVAVNVLS---VESKQGETEFMSEVASMANIN 88
            R   K+G+G FG V +G  +        VAV  L    +   +   +F+ EV +M +++
Sbjct: 10  LRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLD 69

Query: 89  ICHENLVKLHGGCIDGPSRILAPLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFN 148
             H NL++L+G  +  P             + + T+L  +   +        +K++  F 
Sbjct: 70  --HRNLIRLYGVVLTPP-------------MKMVTELAPLGSLLDRL-----RKHQGHFL 109

Query: 149 WIARREIALGIARGLAYIHE 168
                  A+ +A G+ Y+  
Sbjct: 110 LGTLSRYAVQVAEGMGYLES 129

>d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fibroblast growth factor receptor 1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 72.6 bits (177), Expect = 2e-16
 Identities = 29/147 (19%), Positives = 52/147 (35%), Gaps = 12/147 (8%)

Query: 31  IATNGFRTSNKIGEGGFGSVYKGRL--------EDGTVVAVNVLSVE-SKQGETEFMSEV 81
           +  +       +GEG FG V                T VAV +L  + +++  ++ +SE+
Sbjct: 10  LPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEM 69

Query: 82  ASMANINICHENLVKLHGGCIDGPSRILAPLQASIEALFLFTKLWKMDKFISIYVVSGSK 141
             M  I   H+N++ L G C       +  +        L   L         Y  + S 
Sbjct: 70  EMMKMIG-KHKNIINLLGACTQDGPLYV--IVEYASKGNLREYLQARRPPGLEYSYNPSH 126

Query: 142 KNRVKFNWIARREIALGIARGLAYIHE 168
               + +       A  +ARG+ Y+  
Sbjct: 127 NPEEQLSSKDLVSCAYQVARGMEYLAS 153

>d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase SYK
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 71.7 bits (175), Expect = 4e-16
 Identities = 24/133 (18%), Positives = 47/133 (35%), Gaps = 26/133 (19%)

Query: 40  NKIGEGGFGSVYKGRLED---GTVVAVNVLSVESKQGET--EFMSEVASMANINICHENL 94
            ++G G FG+V KG  +       VAV +L  E+       E ++E   M  ++  +  +
Sbjct: 13  KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLD--NPYI 70

Query: 95  VKLHGGCIDGPSRILAPLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARRE 154
           V++ G C      ++  +    E   L   L +                          E
Sbjct: 71  VRMIGICEAESWMLVMEM---AELGPLNKYLQQ----------------NRHVKDKNIIE 111

Query: 155 IALGIARGLAYIH 167
           +   ++ G+ Y+ 
Sbjct: 112 LVHQVSMGMKYLE 124

>d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]} Length = 303

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Type I TGF-beta receptor R4
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 71.4 bits (174), Expect = 5e-16
 Identities = 35/133 (26%), Positives = 53/133 (39%), Gaps = 25/133 (18%)

Query: 41  KIGEGGFGSVYKGRLEDGTVVAVNVLSVESKQGETEFMSEVASMANINICHENLVKLHGG 100
            IG+G FG V++G+   G  VAV +    S + E  +  E      + + HEN++     
Sbjct: 10  SIGKGRFGEVWRGKW-RGEEVAVKIF---SSREERSWFREAEIYQTVMLRHENILGFIAA 65

Query: 101 CIDGPSRILAPLQASIEALFLFTKLWKMDKFISIYVVSGSKK---NRVKFNWIARREIAL 157
                                +T+LW     +S Y   GS     NR         ++AL
Sbjct: 66  DNKDNGT--------------WTQLW----LVSDYHEHGSLFDYLNRYTVTVEGMIKLAL 107

Query: 158 GIARGLAYIHEEI 170
             A GLA++H EI
Sbjct: 108 STASGLAHLHMEI 120

>d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]} Length = 345

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase Erk2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 71.8 bits (175), Expect = 5e-16
 Identities = 22/141 (15%), Positives = 45/141 (31%), Gaps = 25/141 (17%)

Query: 33  TNGFRTSNKIGEGGFGSVYKGR-LEDGTVVAVNVLSVESKQGETE-FMSEVASMANINIC 90
              +   + IGEG +G V       +   VA+  +S    Q   +  + E+  +      
Sbjct: 7   GPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFR-- 64

Query: 91  HENLVKLHGGCIDGPSRILAPLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVK---F 147
           HEN++ ++          +  +                  ++  +++       +K    
Sbjct: 65  HENIIGINDIIRAPTIEQMKDV------------------YLVTHLMGADLYKLLKTQHL 106

Query: 148 NWIARREIALGIARGLAYIHE 168
           +          I RGL YIH 
Sbjct: 107 SNDHICYFLYQILRGLKYIHS 127

>d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 271

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell cycle checkpoint kinase chk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 71.2 bits (174), Expect = 6e-16
 Identities = 23/135 (17%), Positives = 45/135 (33%), Gaps = 22/135 (16%)

Query: 36  FRTSNKIGEGGFGSVYKGR-LEDGTVVAVNVLSVESKQGETE-FMSEVASMANINICHEN 93
           +     +GEG +G V           VAV ++ ++      E    E+     +N  HEN
Sbjct: 7   WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLN--HEN 64

Query: 94  LVKLHGGCIDGPSRILAPLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARR 153
           +VK +G   +G  + L            +    ++   I         +  +       +
Sbjct: 65  VVKFYGHRREGNIQYL---------FLEYCSGGELFDRI---------EPDIGMPEPDAQ 106

Query: 154 EIALGIARGLAYIHE 168
                +  G+ Y+H 
Sbjct: 107 RFFHQLMAGVVYLHG 121

>d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 283

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: epha2 receptor tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 71.0 bits (173), Expect = 6e-16
 Identities = 28/145 (19%), Positives = 53/145 (36%), Gaps = 25/145 (17%)

Query: 30  KIATNGFRTSNKIGEGGFGSVYKGRLEDGT-----VVAVNVLSVESKQGE-TEFMSEVAS 83
           +I  +       IG G FG VYKG L+  +      VA+  L     + +  +F+ E   
Sbjct: 3   EIHPSCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGI 62

Query: 84  MANINICHENLVKLHGGCIDGPSRILAPLQASIEALFLFTKLWKMDKFISIYVVSGSKKN 143
           M   +  H N+++L G                   + + T+  +             ++ 
Sbjct: 63  MGQFS--HHNIIRLEGVISKYKP------------MMIITEYMENGALDKFL-----REK 103

Query: 144 RVKFNWIARREIALGIARGLAYIHE 168
             +F+ +    +  GIA G+ Y+  
Sbjct: 104 DGEFSVLQLVGMLRGIAAGMKYLAN 128

>d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 317

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: EGF receptor tyrosine kinase, Erbb-1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 70.6 bits (172), Expect = 1e-15
 Identities = 24/138 (17%), Positives = 53/138 (38%), Gaps = 26/138 (18%)

Query: 36  FRTSNKIGEGGFGSVYKGR-LEDGTVVAVNVL-----SVESKQGETEFMSEVASMANINI 89
           F+    +G G FG+VYKG  + +G  V + V         S +   E + E   MA+++ 
Sbjct: 11  FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD- 69

Query: 90  CHENLVKLHGGCIDGPSRILAPLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNW 149
            + ++ +L G C+    +++                          ++   ++++     
Sbjct: 70  -NPHVCRLLGICLTSTVQLI------------------TQLMPFGCLLDYVREHKDNIGS 110

Query: 150 IARREIALGIARGLAYIH 167
                  + IA+G+ Y+ 
Sbjct: 111 QYLLNWCVQIAKGMNYLE 128

>d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]} Length = 286

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: (Plasmodium falciparum) [TaxId: 5833]

 Score = 69.9 bits (170), Expect = 2e-15
 Identities = 25/135 (18%), Positives = 48/135 (35%), Gaps = 22/135 (16%)

Query: 36  FRTSNKIGEGGFGSVYKGRLEDGTVVAVNVLSVE--SKQGETEFMSEVASMANINICHEN 93
           +    KIGEG +G VYK +   G   A+  + +E   +   +  + E++ +  +   H N
Sbjct: 4   YHGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELK--HSN 61

Query: 94  LVKLHGGCIDGPSRILAPLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARR 153
           +VKL+         +L      +           +D                    +  +
Sbjct: 62  IVKLYDVIHTKKRLVL------VFEHLDQDLKKLLD------------VCEGGLESVTAK 103

Query: 154 EIALGIARGLAYIHE 168
              L +  G+AY H+
Sbjct: 104 SFLLQLLNGIAYCHD 118

>d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]} Length = 269

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine-protein kinase Nek2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 69.6 bits (170), Expect = 2e-15
 Identities = 26/136 (19%), Positives = 45/136 (33%), Gaps = 17/136 (12%)

Query: 36  FRTSNKIGEGGFGSVYKGR-LEDGTVVAVNVLSVES--KQGETEFMSEVASMANINICHE 92
           +     IG G +G   K R   DG ++    L   S  +  +   +SEV  +  +   H 
Sbjct: 6   YEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELK--HP 63

Query: 93  NLVKLHGGCIDGPSRILAPLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIAR 152
           N+V+ +   ID  +  L  +    E   L + + K              K R   +    
Sbjct: 64  NIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITK------------GTKERQYLDEEFV 111

Query: 153 REIALGIARGLAYIHE 168
             +   +   L   H 
Sbjct: 112 LRVMTQLTLALKECHR 127

>d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Focal adhesion kinase 1 (fak)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 69.4 bits (169), Expect = 2e-15
 Identities = 26/138 (18%), Positives = 49/138 (35%), Gaps = 25/138 (18%)

Query: 36  FRTSNKIGEGGFGSVYKGRL----EDGTVVAVNVLSVESKQGETE-FMSEVASMANINIC 90
                 IGEG FG V++G           VA+      +     E F+ E  +M   +  
Sbjct: 9   IELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFD-- 66

Query: 91  HENLVKLHGGCIDGPSRILAPLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWI 150
           H ++VKL G   + P             +++  +L  + +  S       +  +   +  
Sbjct: 67  HPHIVKLIGVITENP-------------VWIIMELCTLGELRSFL-----QVRKYSLDLA 108

Query: 151 ARREIALGIARGLAYIHE 168
           +    A  ++  LAY+  
Sbjct: 109 SLILYAYQLSTALAYLES 126

>d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]} Length = 364

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: G-protein coupled receptor kinase 2
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 69.4 bits (169), Expect = 4e-15
 Identities = 29/140 (20%), Positives = 49/140 (35%), Gaps = 23/140 (16%)

Query: 34  NGFRTSNKIGEGGFGSVYKGR-LEDGTVVAVNVLS---VESKQGETEFMSEVASMANINI 89
           N F     IG GGFG VY  R  + G + A+  L    ++ KQGET  ++E   ++ ++ 
Sbjct: 4   NDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVST 63

Query: 90  C-HENLVKLHGGCIDGPSRILAPLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFN 148
                +V +                              +D  ++   +         F+
Sbjct: 64  GDCPFIVCMSYAFHTPDKLSFI-----------------LD-LMNGGDLHYHLSQHGVFS 105

Query: 149 WIARREIALGIARGLAYIHE 168
               R  A  I  GL ++H 
Sbjct: 106 EADMRFYAAEIILGLEHMHN 125

>d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]} Length = 311

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Hepatocyte growth factor receptor, c-MET
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 68.7 bits (167), Expect = 7e-15
 Identities = 31/157 (19%), Positives = 52/157 (33%), Gaps = 28/157 (17%)

Query: 16  VQGYKFSKISYNELKIATNGFRTSNKIGEGGFGSVYKGRLED----GTVVAVNVLSVESK 71
           VQ  +   I  + L +       +  IG G FG VY G L D        AV  L+  + 
Sbjct: 14  VQAVQHVVIGPSSLIV-----HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITD 68

Query: 72  QGETE-FMSEVASMANINICHENLVKLHGGCIDGPSRILAPLQASIEALFLFTKLWKMDK 130
            GE   F++E   M + +  H N++ L G C+                  +     K   
Sbjct: 69  IGEVSQFLTEGIIMKDFS--HPNVLSLLGICLRSEGS-----------PLVVLPYMKHGD 115

Query: 131 FISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIH 167
             +       +               L +A+G+ ++ 
Sbjct: 116 LRNFI-----RNETHNPTVKDLIGFGLQVAKGMKFLA 147

>d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 308

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Insulin-like growth factor 1 receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 68.0 bits (165), Expect = 9e-15
 Identities = 31/149 (20%), Positives = 60/149 (40%), Gaps = 17/149 (11%)

Query: 28  ELKIATNGFRTSNKIGEGGFGSVYKGRL------EDGTVVAVNVLSVESKQGE-TEFMSE 80
           E ++A      S ++G+G FG VY+G        E  T VA+  ++  +   E  EF++E
Sbjct: 14  EWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNE 73

Query: 81  VASMANINICHENLVKLHGGCIDGPSRILAPLQASIEALFLFTKLWKMDKFISIYVVSGS 140
            + M   N    ++V+L G    G   ++     +   L  + +  +            +
Sbjct: 74  ASVMKEFN--CHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMA--------N 123

Query: 141 KKNRVKFNWIARREIALGIARGLAYIHEE 169
                  +     ++A  IA G+AY++  
Sbjct: 124 NPVLAPPSLSKMIQMAGEIADGMAYLNAN 152

>d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]} Length = 346

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38-gamma
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 67.9 bits (165), Expect = 1e-14
 Identities = 23/136 (16%), Positives = 42/136 (30%), Gaps = 19/136 (13%)

Query: 36  FRTSNKIGEGGFGSVYKGR-LEDGTVVAVNVL--SVESKQGETEFMSEVASMANINICHE 92
           +R    +G G +G+V        G  VA+  L    +S+        E+  + ++   HE
Sbjct: 20  YRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMR--HE 77

Query: 93  NLVKLHGGCIDGPSRILAPLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIAR 152
           N++ L        +             +L       D                K      
Sbjct: 78  NVIGLLDVFTPDETLDD------FTDFYLVMPFMGTDLG--------KLMKHEKLGEDRI 123

Query: 153 REIALGIARGLAYIHE 168
           + +   + +GL YIH 
Sbjct: 124 QFLVYQMLKGLRYIHA 139

>d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 7, CDK7
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 67.6 bits (164), Expect = 1e-14
 Identities = 23/135 (17%), Positives = 48/135 (35%), Gaps = 26/135 (19%)

Query: 40  NKIGEGGFGSVYKGR-LEDGTVVAVNVLSVESKQGETE-----FMSEVASMANINICHEN 93
           + +GEG F +VYK R      +VA+  + +  +    +      + E+  +  ++  H N
Sbjct: 4   DFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELS--HPN 61

Query: 94  LVKLHGGCIDGPSRILAPLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARR 153
           ++ L        +            + L     + D  + I        N +       +
Sbjct: 62  IIGLLDAFGHKSN------------ISLVFDFMETDLEVIIK------DNSLVLTPSHIK 103

Query: 154 EIALGIARGLAYIHE 168
              L   +GL Y+H+
Sbjct: 104 AYMLMTLQGLEYLHQ 118

>d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]} Length = 305

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK6
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 66.4 bits (161), Expect = 3e-14
 Identities = 29/143 (20%), Positives = 53/143 (37%), Gaps = 17/143 (11%)

Query: 32  ATNGFRTSNKIGEGGFGSVYKGR--LEDGTVVAVNVLSVESKQG--ETEFMSEVASMANI 87
           A   +    +IGEG +G V+K R     G  VA+  + V++ +       + EVA + ++
Sbjct: 5   ADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHL 64

Query: 88  NIC-HENLVKLHGGCIDGPSRILAPLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVK 146
               H N+V+L   C    +            L L  +    D    +      K     
Sbjct: 65  ETFEHPNVVRLFDVCTVSRTD-------RETKLTLVFEHVDQDLTTYLD-----KVPEPG 112

Query: 147 FNWIARREIALGIARGLAYIHEE 169
                 +++   + RGL ++H  
Sbjct: 113 VPTETIKDMMFQLLRGLDFLHSH 135

>d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]} Length = 321

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Titin, kinase domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 66.2 bits (161), Expect = 4e-14
 Identities = 17/134 (12%), Positives = 41/134 (30%), Gaps = 21/134 (15%)

Query: 36  FRTSNKIGEGGFGSVYKGR-LEDGTVVAVNVLSVESKQGETEFMSEVASMANINICHENL 94
           +  +  +G G FG V++              + V+    +     E++ +      H N+
Sbjct: 7   YMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKGTD-QVLVKKEISILNIAR--HRNI 63

Query: 95  VKLHGGCIDGPSRILAPLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARRE 154
           + LH         ++  +   I  L +F ++                 +  + N      
Sbjct: 64  LHLHESFESMEELVM--IFEFISGLDIFERI---------------NTSAFELNEREIVS 106

Query: 155 IALGIARGLAYIHE 168
               +   L ++H 
Sbjct: 107 YVHQVCEALQFLHS 120

>d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]} Length = 298

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 66.0 bits (160), Expect = 4e-14
 Identities = 31/145 (21%), Positives = 54/145 (37%), Gaps = 28/145 (19%)

Query: 36  FRTSNKIGEGGFGSVYKGR-LEDGTVVAVNVL--SVESKQGETEFMSEVASMANINICHE 92
           F+   KIGEG +G VYK R    G VVA+  +    E++   +  + E++ +  +N  H 
Sbjct: 4   FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN--HP 61

Query: 93  NLVKLHGGCIDGPSRILAPLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIAR 152
           N+VKL                     L+L  +    D    +                  
Sbjct: 62  NIVKLLDVIHTENK------------LYLVFEFLHQDLKKFMD-----ASALTGIPLPLI 104

Query: 153 REIALGIARGLAY------IHEEIK 171
           +     + +GLA+      +H ++K
Sbjct: 105 KSYLFQLLQGLAFCHSHRVLHRDLK 129

>d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Proto-oncogene serine/threonine-protein kinase Pim-1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 65.5 bits (159), Expect = 6e-14
 Identities = 23/140 (16%), Positives = 42/140 (30%), Gaps = 24/140 (17%)

Query: 36  FRTSNKIGEGGFGSVYKGR-LEDGTVVAVNVLSVESKQGETE------FMSEVASMANIN 88
           ++    +G GGFGSVY G  + D   VA+  +  +      E         EV  +  ++
Sbjct: 6   YQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVS 65

Query: 89  ICHENLVKLHGGCIDGPSRILAPLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFN 148
                +++L        S +L      +E       L+                 R    
Sbjct: 66  SGFSGVIRLLDWFERPDSFVLI-----LERPEPVQDLFDF------------ITERGALQ 108

Query: 149 WIARREIALGIARGLAYIHE 168
               R     +   + + H 
Sbjct: 109 EELARSFFWQVLEAVRHCHN 128

>d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Mycobacterial protein kinase PknB, catalytic domain
species: Mycobacterium tuberculosis [TaxId: 1773]

 Score = 65.5 bits (159), Expect = 6e-14
 Identities = 22/140 (15%), Positives = 42/140 (30%), Gaps = 20/140 (14%)

Query: 33  TNGFRTSNKIGEGGFGSVYKGR-LEDGTVVAVNVLSVESKQGET---EFMSEVASMANIN 88
           ++ +     +G GG   V+  R L     VAV VL  +  +  +    F  E  + A +N
Sbjct: 6   SDRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALN 65

Query: 89  ICHENLVKLHGGCIDGPSRILAPLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFN 148
             H  +V ++                     ++  +         I    G         
Sbjct: 66  --HPAIVAVYDTGEAETPA--------GPLPYIVMEYVDGVTLRDIVHTEG------PMT 109

Query: 149 WIARREIALGIARGLAYIHE 168
                E+     + L + H+
Sbjct: 110 PKRAIEVIADACQALNFSHQ 129

>d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]} Length = 348

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 66.1 bits (160), Expect = 7e-14
 Identities = 30/136 (22%), Positives = 48/136 (35%), Gaps = 19/136 (13%)

Query: 36  FRTSNKIGEGGFGSVYKGR-LEDGTVVAVNVLS--VESKQGETEFMSEVASMANINICHE 92
           ++  + +G G +GSV      + G  VAV  LS   +S         E+  + ++   HE
Sbjct: 20  YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMK--HE 77

Query: 93  NLVKLHGGCIDGPSRILAPLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIAR 152
           N++ L        S            ++L T L   D          +     K      
Sbjct: 78  NVIGLLDVFTPARSLE------EFNDVYLVTHLMGADLN--------NIVKCQKLTDDHV 123

Query: 153 REIALGIARGLAYIHE 168
           + +   I RGL YIH 
Sbjct: 124 QFLIYQILRGLKYIHS 139

>d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 65.2 bits (158), Expect = 1e-13
 Identities = 25/142 (17%), Positives = 45/142 (31%), Gaps = 23/142 (16%)

Query: 28  ELKIATNGFRTSNKIGEGGFGSVYKGR-LEDGTVVAVNVLSVESKQGETEFMSEVASMAN 86
           EL++  N +R   KIG G FG +Y G  +  G  VA+ +  V++K    +   E      
Sbjct: 2   ELRVG-NRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKH--PQLHIESKIYKM 58

Query: 87  INICHENLVKLHGGCIDGPSRILAPLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVK 146
           +       +     C                          + + +   +         K
Sbjct: 59  MQ--GGVGIPTIRWCGAEGDY-----------------NVMVMELLGPSLEDLFNFCSRK 99

Query: 147 FNWIARREIALGIARGLAYIHE 168
           F+      +A  +   + YIH 
Sbjct: 100 FSLKTVLLLADQMISRIEYIHS 121

>d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 307

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Calmodulin-dependent protein kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 64.7 bits (157), Expect = 2e-13
 Identities = 23/149 (15%), Positives = 49/149 (32%), Gaps = 30/149 (20%)

Query: 26  YNELKIATNGFRTSNKIGEGGFGSVYKGR-LEDGTVVAVNVLSVESKQG-ETEFMSEVAS 83
           + + +   + +   + +G G F  V          +VA+  ++ ++ +G E    +E+A 
Sbjct: 1   WKQAEDIRDIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKKALEGKEGSMENEIAV 60

Query: 84  MANINICHENLVKLHGGCIDGPSRILAPLQASIEALFLFTKLWKMDKFISIYVVSGSKKN 143
           +  I   H N+V L      G    L                  M       V  G   +
Sbjct: 61  LHKIK--HPNIVALDDIYESGGHLYLI-----------------MQ-----LVSGGELFD 96

Query: 144 RVK----FNWIARREIALGIARGLAYIHE 168
           R+     +       +   +   + Y+H+
Sbjct: 97  RIVEKGFYTERDASRLIFQVLDAVKYLHD 125

>d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 288

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: 3-phosphoinositide dependent protein kinase-1 Pdk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 64.3 bits (156), Expect = 2e-13
 Identities = 28/143 (19%), Positives = 44/143 (30%), Gaps = 24/143 (16%)

Query: 30  KIATNGFRTSNKIGEGGFGSVYKGR-LEDGTVVAVNVLS---VESKQGETEFMSEVASMA 85
           K     F+    +GEG F +V   R L      A+ +L    +  +        E   M+
Sbjct: 4   KKRPEDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMS 63

Query: 86  NINICHENLVKLHGGCIDGPSRILAPLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRV 145
            ++  H   VKL+    D             E L+      K  + +      G      
Sbjct: 64  RLD--HPFFVKLYFTFQDD------------EKLYFGLSYAKNGELLKYIRKIG------ 103

Query: 146 KFNWIARREIALGIARGLAYIHE 168
            F+    R     I   L Y+H 
Sbjct: 104 SFDETCTRFYTAEIVSALEYLHG 126

>d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 316

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 64.3 bits (156), Expect = 2e-13
 Identities = 22/137 (16%), Positives = 46/137 (33%), Gaps = 24/137 (17%)

Query: 36  FRTSNKIGEGGFGSVYKGR-LEDGTVVAVNVLS---VESKQGETEFMSEVASMANINICH 91
           F+    +G G FG V+  R   +G   A+ VL    V   +       E   ++ +   H
Sbjct: 6   FQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVT--H 63

Query: 92  ENLVKLHGGCIDGPSRILAPLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIA 151
             ++++ G   D                    +++ +  +I    +    +   +F    
Sbjct: 64  PFIIRMWGTFQDAQ------------------QIFMIMDYIEGGELFSLLRKSQRFPNPV 105

Query: 152 RREIALGIARGLAYIHE 168
            +  A  +   L Y+H 
Sbjct: 106 AKFYAAEVCLALEYLHS 122

>d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 270

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase wnk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 63.9 bits (155), Expect = 3e-13
 Identities = 28/141 (19%), Positives = 45/141 (31%), Gaps = 27/141 (19%)

Query: 36  FRTSNKIGEGGFGSVYKGRL-EDGTVVAVNVLSVE--SKQGETEFMSEVASMANINICHE 92
            +   +IG G F +VYKG   E    VA   L     +K     F  E   +  +   H 
Sbjct: 11  LKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQ--HP 68

Query: 93  NLVKLHGGCIDGPSRILAPLQASIEALFLFTKLWKMDKFISIYVVSGS----KKNRVKFN 148
           N+V+ +                  + + L T+           + SG+     K      
Sbjct: 69  NIVRFYDSWESTVKG--------KKCIVLVTE----------LMTSGTLKTYLKRFKVMK 110

Query: 149 WIARREIALGIARGLAYIHEE 169
               R     I +GL ++H  
Sbjct: 111 IKVLRSWCRQILKGLQFLHTR 131

>d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 337

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Pkb kinase (Akt-2)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 62.9 bits (152), Expect = 8e-13
 Identities = 27/143 (18%), Positives = 39/143 (27%), Gaps = 24/143 (16%)

Query: 30  KIATNGFRTSNKIGEGGFGSVYKGR-LEDGTVVAVNVLS---VESKQGETEFMSEVASMA 85
           K+  N F     +G+G FG V   R    G   A+ +L    + +K      ++E   + 
Sbjct: 1   KVTMNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQ 60

Query: 86  NINICHENLVKLHGGCIDGPSRILAPLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRV 145
           N    H  L  L                A+   LF                         
Sbjct: 61  NTR--HPFLTALKYAFQTHDRLCFVMEYANGGELFFH------------------LSRER 100

Query: 146 KFNWIARREIALGIARGLAYIHE 168
            F     R     I   L Y+H 
Sbjct: 101 VFTEERARFYGAEIVSALEYLHS 123

>d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: gamma-subunit of glycogen phosphorylase kinase (Phk)
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

 Score = 62.0 bits (150), Expect = 1e-12
 Identities = 19/147 (12%), Positives = 41/147 (27%), Gaps = 37/147 (25%)

Query: 36  FRTSNKIGEGGFGSVYKGR-LEDGTVVAVNVLSV---------ESKQGETEFMSEVASMA 85
           +     +G G    V +          AV ++ V         E ++     + EV  + 
Sbjct: 5   YEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILR 64

Query: 86  NINICHENLVKLHGGCIDGPSRILAPLQASIEALFLFTKLWKMDKFISIYVVSGS----K 141
            ++  H N+++L           L                   D      +  G      
Sbjct: 65  KVS-GHPNIIQLKDTYETNTFFFLV-----------------FD-----LMKKGELFDYL 101

Query: 142 KNRVKFNWIARREIALGIARGLAYIHE 168
             +V  +    R+I   +   +  +H+
Sbjct: 102 TEKVTLSEKETRKIMRALLEVICALHK 128

>d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]} Length = 328

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase CK2, alpha subunit
species: Rattus norvegicus [TaxId: 10116]

 Score = 61.8 bits (149), Expect = 2e-12
 Identities = 23/137 (16%), Positives = 45/137 (32%), Gaps = 26/137 (18%)

Query: 34  NGFRTSNKIGEGGFGSVYKGR-LEDGTVVAVNVLSVESKQGETEFMSEVASMANINICHE 92
           + ++   K+G G +  V++   + +   V V +L    K+   +   E+  + N+     
Sbjct: 35  DDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKKK---KIKREIKILENLR-GGP 90

Query: 93  NLVKLHGGCIDGPSRILAPLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVK-FNWIA 151
           N++ L     D  SR  A                     +  +V +   K   +      
Sbjct: 91  NIITLADIVKDPVSRTPA--------------------LVFEHVNNTDFKQLYQTLTDYD 130

Query: 152 RREIALGIARGLAYIHE 168
            R     I + L Y H 
Sbjct: 131 IRFYMYEILKALDYCHS 147

>d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]} Length = 318

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 9, CDK9
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 61.4 bits (148), Expect = 2e-12
 Identities = 32/136 (23%), Positives = 55/136 (40%), Gaps = 15/136 (11%)

Query: 36  FRTSNKIGEGGFGSVYKGR-LEDGTVVAVNVLSVESKQG--ETEFMSEVASMANINICHE 92
           +    KIG+G FG V+K R  + G  VA+  + +E+++       + E+  +  +   HE
Sbjct: 12  YEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLK--HE 69

Query: 93  NLVKLHGGCIDGPSRILAPLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIAR 152
           N+V L   C    S    P      +++L     + D    +          VKF     
Sbjct: 70  NVVNLIEICRTKAS----PYNRCKGSIYLVFDFCEHDLAGLLS------NVLVKFTLSEI 119

Query: 153 REIALGIARGLAYIHE 168
           + +   +  GL YIH 
Sbjct: 120 KRVMQMLLNGLYYIHR 135

>d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]} Length = 320

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase C, theta type
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 60.9 bits (147), Expect = 3e-12
 Identities = 21/137 (15%), Positives = 41/137 (29%), Gaps = 23/137 (16%)

Query: 36  FRTSNKIGEGGFGSVYKGR-LEDGTVVAVNVLSVESKQGETE---FMSEVASMANINICH 91
           F     +G+G FG V+     +     A+  L  +    + +    M E   ++ +   H
Sbjct: 4   FILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLS-LAWEH 62

Query: 92  ENLVKLHGGCIDGPSRILAPLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIA 151
             L  +        +            LF   +       +         ++  KF+   
Sbjct: 63  PFLTHMFCTFQTKEN------------LFFVMEYLNGGDLMYHI------QSCHKFDLSR 104

Query: 152 RREIALGIARGLAYIHE 168
               A  I  GL ++H 
Sbjct: 105 ATFYAAEIILGLQFLHS 121

>d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 61.0 bits (147), Expect = 4e-12
 Identities = 32/172 (18%), Positives = 55/172 (31%), Gaps = 25/172 (14%)

Query: 2   HGHSQYSIINYSRKVQGYKFSKISYNELKIAT-NGFRTSNKIGEGGFGSVYKGR-LEDGT 59
            G  Q S+  +  K +     K        A  + F     +G G FG V   +  E G 
Sbjct: 8   KGSEQESVKEFLAKAKEDFLKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGN 67

Query: 60  VVAVNVLSVESKQGETE---FMSEVASMANINICHENLVKLHGGCIDGPSRILAPLQASI 116
             A+ +L  +      +    ++E   +  +N     LVKL     D  +  L  +   +
Sbjct: 68  HYAMKILDKQKVVKLKQIEHTLNEKRILQAVN--FPFLVKLEFSFKD--NSNLYMVMEYV 123

Query: 117 EALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHE 168
               +F+ L +                  +F+    R  A  I     Y+H 
Sbjct: 124 AGGEMFSHLRR----------------IGRFSEPHARFYAAQIVLTFEYLHS 159

>d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Death-associated protein kinase, Dap
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 59.8 bits (144), Expect = 7e-12
 Identities = 23/140 (16%), Positives = 40/140 (28%), Gaps = 27/140 (19%)

Query: 36  FRTSNKIGEGGFGSVYKGR-LEDGTVVAVNVLSVESKQGE------TEFMSEVASMANIN 88
           + T  ++G G F  V K R    G   A   +     +         +   EV+ +  I 
Sbjct: 12  YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 71

Query: 89  ICHENLVKLHGGCIDGPSRILAPLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFN 148
             H N++ LH    +               + L  +L    +             +    
Sbjct: 72  --HPNVITLHEVYENKTD------------VILILELVAGGELFDFL------AEKESLT 111

Query: 149 WIARREIALGIARGLAYIHE 168
                E    I  G+ Y+H 
Sbjct: 112 EEEATEFLKQILNGVYYLHS 131

>d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]} Length = 292

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK5
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 60.0 bits (144), Expect = 8e-12
 Identities = 22/135 (16%), Positives = 47/135 (34%), Gaps = 23/135 (17%)

Query: 36  FRTSNKIGEGGFGSVYKGR-LEDGTVVAVNVLSVE--SKQGETEFMSEVASMANINICHE 92
           +    KIGEG +G+V+K +  E   +VA+  + ++   +   +  + E+  +  +   H+
Sbjct: 4   YEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELK--HK 61

Query: 93  NLVKLHGGCIDGPSRILAPLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIAR 152
           N+V+LH          L       +    F                         +    
Sbjct: 62  NIVRLHDVLHSDKKLTLVFEFCDQDLKKYFDSCNGD------------------LDPEIV 103

Query: 153 REIALGIARGLAYIH 167
           +     + +GL + H
Sbjct: 104 KSFLFQLLKGLGFCH 118

>d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 362

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Sky1p
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 57.0 bits (136), Expect = 1e-10
 Identities = 18/133 (13%), Positives = 52/133 (39%), Gaps = 6/133 (4%)

Query: 36  FRTSNKIGEGGFGSVYKGR-LEDGTVVAVNVLSVESKQGETEFMSEVASMANINICHENL 94
           +    K+G G F +V+  + + + T VA+ ++  +    E     E+  +  +N    + 
Sbjct: 15  YILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDKVYTE-AAEDEIKLLQRVN--DADN 71

Query: 95  VKLHGGCIDGPSRILAPLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARRE 154
            K      +   ++L               ++++     + ++   +   +   ++  ++
Sbjct: 72  TKEDSMGANHILKLLDHFNHKGPNGVHVVMVFEVLGENLLALIKKYEHRGIPLIYV--KQ 129

Query: 155 IALGIARGLAYIH 167
           I+  +  GL Y+H
Sbjct: 130 ISKQLLLGLDYMH 142

>d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]} Length = 355

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-jun N-terminal kinase (jnk3s)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 56.9 bits (136), Expect = 1e-10
 Identities = 19/136 (13%), Positives = 46/136 (33%), Gaps = 20/136 (14%)

Query: 36  FRTSNKIGEGGFGSVYKGR-LEDGTVVAVNVLS--VESKQGETEFMSEVASMANINICHE 92
           ++    IG G  G V           VA+  LS   +++        E+  M  +N  H+
Sbjct: 19  YQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVN--HK 76

Query: 93  NLVKLHGGCIDGPSRILAPLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIAR 152
           N++ L        +          + ++L  +L   +           +  +++ +    
Sbjct: 77  NIISLLNVFTPQKTL------EEFQDVYLVMELMDANLC---------QVIQMELDHERM 121

Query: 153 REIALGIARGLAYIHE 168
             +   +  G+ ++H 
Sbjct: 122 SYLLYQMLCGIKHLHS 137

>d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]} Length = 335

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase activated protein kinase 2, mapkap2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 55.1 bits (132), Expect = 4e-10
 Identities = 22/138 (15%), Positives = 40/138 (28%), Gaps = 31/138 (22%)

Query: 38  TSNKIGEGGFGSVYKGR-LEDGTVVAVNVLSVESKQGETEFMSEVASMANINICHENLVK 96
           TS  +G G  G V +          A+ +L     Q   +   EV      +    ++V+
Sbjct: 16  TSQVLGLGINGKVLQIFNKRTQEKFALKML-----QDCPKARREVELHWRAS-QCPHIVR 69

Query: 97  LHGGCIDGPSRILAPLQASIEALFLFTKLWKMDKFISIYVVSGS------KKNRVKFNWI 150
           +     +        L A  + L +  +           +  G        +    F   
Sbjct: 70  IVDVYEN--------LYAGRKCLLIVME----------CLDGGELFSRIQDRGDQAFTER 111

Query: 151 ARREIALGIARGLAYIHE 168
              EI   I   + Y+H 
Sbjct: 112 EASEIMKSIGEAIQYLHS 129

>d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]

 Score = 54.4 bits (130), Expect = 6e-10
 Identities = 22/134 (16%), Positives = 41/134 (30%), Gaps = 22/134 (16%)

Query: 36  FRTSNKIGEGGFGSVYKGR-LEDGTVVAVNVLSVESKQGETEFMSEVASMANINICHENL 94
           ++   +IGEG FG +++G  L +   VA+      S     +   E  +   +  C   +
Sbjct: 7   YKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRSD--APQLRDEYRTYKLLAGCT-GI 63

Query: 95  VKLHGGCIDGPSRILAPLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARRE 154
             ++    +G                L   L        +           KF+      
Sbjct: 64  PNVYYFGQEG------------LHNVLVIDLLGPSLEDLL------DLCGRKFSVKTVAM 105

Query: 155 IALGIARGLAYIHE 168
            A  +   +  IHE
Sbjct: 106 AAKQMLARVQSIHE 119

>d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Ribosomal protein S6 kinase alpha 5, Msk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 54.1 bits (129), Expect = 8e-10
 Identities = 27/147 (18%), Positives = 48/147 (32%), Gaps = 27/147 (18%)

Query: 30  KIATNGFRTSNKIGEGGFGSVYKGRL----EDGTVVAVNVLS----VESKQGETEFMSEV 81
           K+    F     +G G +G V+  R     + G + A+ VL     V+  +      +E 
Sbjct: 20  KVGIENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTER 79

Query: 82  ASMANINICHENLVKLHGGCIDGPSRILAPLQASIEALFLFTKLWKMDKFISIYVVSGSK 141
             + +I      LV LH                        TKL  +  +I+   +    
Sbjct: 80  QVLEHIR-QSPFLVTLHYAFQTE------------------TKLHLILDYINGGELFTHL 120

Query: 142 KNRVKFNWIARREIALGIARGLAYIHE 168
             R +F     +     I   L ++H+
Sbjct: 121 SQRERFTEHEVQIYVGEIVLALEHLHK 147

>d1zara2 d.144.1.9 (A:91-281) Rio2 serine protein kinase C-terminal domain {Archaeoglobus fulgidus [TaxId: 2234]} Length = 191

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: RIO1-like kinases
domain: Rio2 serine protein kinase C-terminal domain
species: Archaeoglobus fulgidus [TaxId: 2234]

 Score = 51.3 bits (122), Expect = 3e-09
 Identities = 19/139 (13%), Positives = 34/139 (24%), Gaps = 33/139 (23%)

Query: 40  NKIGEGGFGSVYKGRLEDGTVVAVNVLSVES----------KQGETEFMSEVASMANINI 89
             +GEG   +V+    E      V    V              G+  F      + +   
Sbjct: 6   KLMGEGKESAVFNCYSEKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLA--IRSARN 63

Query: 90  CHENLVKLHGGCIDGPSRILAPLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNW 149
               L KL G  +        P   + E   +  +L    +               +   
Sbjct: 64  EFRALQKLQGLAV--------PKVYAWEGNAVLMELIDAKELY-------------RVRV 102

Query: 150 IARREIALGIARGLAYIHE 168
               E+   I   +A  + 
Sbjct: 103 ENPDEVLDMILEEVAKFYH 121

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	174
d1opja_	287	Abelsone tyrosine kinase (abl) {Mouse (Mus musculu	99.88
d1k2pa_	258	Bruton's tyrosine kinase (Btk) {Human (Homo sapien	99.87
d2jfla1	288	STE20-like serine/threonine-protein kinase, SLK {H	99.87
d1sm2a_	263	Tyrosine-protein kinase Itk/Tsk {Human (Homo sapie	99.87
d1qpca_	272	Lymphocyte kinase (lck) {Human (Homo sapiens) [Tax	99.86
d1nvra_	271	Cell cycle checkpoint kinase chk1 {Human (Homo sap	99.86
d1yhwa1	293	pak1 {Human (Homo sapiens) [TaxId: 9606]}	99.86
d1koaa2	350	Twitchin, kinase domain {Caenorhabditis elegans, p	99.86
d1koba_	352	Twitchin, kinase domain {California sea hare (Aply	99.85
d1uwha_	276	B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]}	99.85
d1fmka3	285	c-src tyrosine kinase {Human (Homo sapiens) [TaxId	99.85
d1s9ja_	322	Dual specificity mitogen-activated protein kinase	99.85
d1jksa_	293	Death-associated protein kinase, Dap {Human (Homo	99.84
d2j4za1	263	Aurora-related kinase 1 (aurora-2) {Human (Homo sa	99.84
d1u59a_	285	Tyrosine-protein kinase ZAP-70 {Human (Homo sapien	99.84
d1tkia_	321	Titin, kinase domain {Human (Homo sapiens) [TaxId:	99.84
d1a06a_	307	Calmodulin-dependent protein kinase {Rat (Rattus n	99.84
d1u5ra_	309	Serine/threonine protein kinase TAO2 {Rat (Rattus	99.84
d2java1	269	Serine/threonine-protein kinase Nek2 {Human (Homo	99.83
d1jpaa_	299	ephb2 receptor tyrosine kinase {Mouse (Mus musculu	99.83
d1uu3a_	288	3-phosphoinositide dependent protein kinase-1 Pdk1	99.83
d1gz8a_	298	Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [T	99.83
d1t4ha_	270	Protein kinase wnk1 {Human (Homo sapiens) [TaxId:	99.82
d1mqba_	283	epha2 receptor tyrosine kinase {Human (Homo sapien	99.82
d1o6la_	337	Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9	99.82
d1ob3a_	286	Cyclin-dependent PK, CDK2 {(Plasmodium falciparum)	99.82
d1phka_	277	gamma-subunit of glycogen phosphorylase kinase (Ph	99.82
d1byga_	262	Carboxyl-terminal src kinase (csk) {Human (Homo sa	99.82
d1mp8a_	273	Focal adhesion kinase 1 (fak) {Human (Homo sapiens	99.81
d1fota_	316	cAMP-dependent PK, catalytic subunit {Baker's yeas	99.81
d1lufa_	301	Musk tyrosine kinase {Rat (Rattus norvegicus) [Tax	99.81
d1o6ya_	277	Mycobacterial protein kinase PknB, catalytic domai	99.81
d1rjba_	325	Fl cytokine receptor {Human (Homo sapiens) [TaxId:	99.8
d1p4oa_	308	Insulin-like growth factor 1 receptor {Human (Homo	99.8
d1xbba_	277	Tyrosine-protein kinase SYK {Human (Homo sapiens)	99.8
d1fgka_	299	Fibroblast growth factor receptor 1 {Human (Homo s	99.8
d1xjda_	320	Protein kinase C, theta type {Human (Homo sapiens)	99.8
d1rdqe_	350	cAMP-dependent PK, catalytic subunit {Mouse (Mus m	99.8
d1xkka_	317	EGF receptor tyrosine kinase, Erbb-1 {Human (Homo	99.8
d1t46a_	311	c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]	99.79
d1fvra_	309	Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]}	99.79
d1unla_	292	Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [T	99.79
d1u46a_	273	Activated CDC42 kinase 1, ACK1 {Human (Homo sapien	99.79
d1ua2a_	299	Cell division protein kinase 7, CDK7 {Human (Homo	99.79
d1xwsa_	273	Proto-oncogene serine/threonine-protein kinase Pim	99.77
d3bqca1	328	Protein kinase CK2, alpha subunit {Rattus norvegic	99.77
d1omwa3	364	G-protein coupled receptor kinase 2 {Cow (Bos taur	99.76
d1ywna1	299	Vascular endothelial growth factor receptor 2 (kdr	99.76
d1cm8a_	346	MAP kinase p38-gamma {Human (Homo sapiens) [TaxId:	99.75
d2gfsa1	348	MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]	99.75
d1pmea_	345	MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606	99.75
d2b1pa1	355	c-jun N-terminal kinase (jnk3s) {Human (Homo sapie	99.74
d1r0pa_	311	Hepatocyte growth factor receptor, c-MET {Human (H	99.74
d3blha1	318	Cell division protein kinase 9, CDK9 {Human (Homo	99.74
d2ozaa1	335	MAP kinase activated protein kinase 2, mapkap2 {Hu	99.72
d1q5ka_	350	Glycogen synthase kinase-3 beta (Gsk3b) {Human (Ho	99.72
d1blxa_	305	Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [T	99.71
d1vjya_	303	Type I TGF-beta receptor R4 {Human (Homo sapiens)	99.7
d1vzoa_	322	Ribosomal protein S6 kinase alpha 5, Msk1 {Human (	99.68
d1ckia_	299	Casein kinase-1, CK1 {Rat (Rattus norvegicus) [Tax	99.64
d1csna_	293	Casein kinase-1, CK1 {Fission yeast (Schizosacchar	99.63
d1q8ya_	362	Sky1p {Baker's yeast (Saccharomyces cerevisiae) [T	99.5
d1zara2	191	Rio2 serine protein kinase C-terminal domain {Arch	99.25
d1j7la_	263	Type IIIa 3',5"-aminoglycoside phosphotransferase	96.48
d1nd4a_	255	Aminoglycoside 3'-phosphotransferase IIa (Kanamyci	94.24

>d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Abelsone tyrosine kinase (abl)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.88  E-value=4.7e-23  Score=146.31  Aligned_cols=126  Identities=26%  Similarity=0.414  Sum_probs=104.9

Q ss_pred             hhhHHhhcCCeeecceecccCCeeEEEEEE-cCCCEEEEEEeeccCccchhHHHHHHHHHhcccccCCCeeeeecceecC
Q 039630           26 YNELKIATNGFRTSNKIGEGGFGSVYKGRL-EDGTVVAVNVLSVESKQGETEFMSEVASMANINICHENLVKLHGGCIDG  104 (174)
Q Consensus        26 ~~~~~~~~~~~~~~~~lg~G~~g~V~~~~~-~~~~~~avK~~~~~~~~~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~~~  104 (174)
                      +++|++..++|++.+.||+|+||.||+|.. .+++.||||+++.. ....+.+.+|+.+++.++  ||||+++++++.+.
T Consensus         9 ~~~wei~~~~~~~~~~iG~G~fg~Vy~a~~~~~~~~vAvK~i~~~-~~~~~~~~~E~~il~~l~--HpnIv~~~~~~~~~   85 (287)
T d1opja_           9 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKED-TMEVEEFLKEAAVMKEIK--HPNLVQLLGVCTRE   85 (287)
T ss_dssp             CCTTBCCGGGEEEEEETTTTTTSSEEEEEEGGGTEEEEEEECCTT-CSCHHHHHHHHHHHHHCC--CTTBCCEEEEECSS
T ss_pred             CcccEecHHHeEEeeEEeeCCCeEEEEEEECCCCeEEEEEEECCc-cchHHHHHHHHHHHHhCC--CCCEecCCccEeeC
Confidence            346777778899999999999999999995 56889999999754 345678999999999999  99999999999999


Q ss_pred             CCcccchhhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhcc
Q 039630          105 PSRILAPLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEI  170 (174)
Q Consensus       105 ~~~~lv~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  170 (174)
                      +..++++  ++.+++.+...+..              .....+++..+..++.|||.||+|||++.
T Consensus        86 ~~~~iv~--E~~~~g~l~~~l~~--------------~~~~~~~~~~~~~i~~qi~~gL~yLH~~~  135 (287)
T d1opja_          86 PPFYIIT--EFMTYGNLLDYLRE--------------CNRQEVSAVVLLYMATQISSAMEYLEKKN  135 (287)
T ss_dssp             SSCEEEE--ECCTTCBHHHHHHH--------------SCTTTSCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             CeeEEEe--ecccCcchHHHhhh--------------ccccchHHHHHHHHHHHHHHHHHHHHHCC
Confidence            9988888  77777777664421              12235789999999999999999999864

>d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Bruton's tyrosine kinase (Btk)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.87  E-value=3.9e-22  Score=139.50  Aligned_cols=118  Identities=23%  Similarity=0.378  Sum_probs=99.9

Q ss_pred             cCCeeecceecccCCeeEEEEEEcCCCEEEEEEeeccCccchhHHHHHHHHHhcccccCCCeeeeecceecCCCcccchh
Q 039630           33 TNGFRTSNKIGEGGFGSVYKGRLEDGTVVAVNVLSVESKQGETEFMSEVASMANINICHENLVKLHGGCIDGPSRILAPL  112 (174)
Q Consensus        33 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~avK~~~~~~~~~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~~~~~~~lv~~  112 (174)
                      .++|+.++.||+|+||.||+|..+++..||||.++.. ....+.+.+|+.++..++  ||||++++|++.+.+..++|+ 
T Consensus         3 ~~~~~~~~~iG~G~fg~Vy~~~~~~~~~vAvK~l~~~-~~~~~~~~~Ev~~~~~l~--HpnIv~~~g~~~~~~~~~iv~-   78 (258)
T d1k2pa_           3 PKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEG-SMSEDEFIEEAKVMMNLS--HEKLVQLYGVCTKQRPIFIIT-   78 (258)
T ss_dssp             CCCCCCCCCCCEETTEEEEEEEETTTEEEEEEEEESS-SSCHHHHHHHHHHHHTCC--CTTBCCEEEEECCSSSEEEEE-
T ss_pred             hHHCEEeEEEecCCCeEEEEEEECCCCEEEEEEECcC-cCCHHHHHHHHHHHHhcC--CCceeeEEEEEeeCCceEEEE-
Confidence            3678899999999999999999888889999999855 345568999999999999  999999999999988888888 


Q ss_pred             hhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhcc
Q 039630          113 QASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEI  170 (174)
Q Consensus       113 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  170 (174)
                       ++.+.+.+.....               .....+++..+..++.|+++||+|||++.
T Consensus        79 -Ey~~~g~l~~~~~---------------~~~~~~~~~~~~~i~~qi~~gl~~LH~~~  120 (258)
T d1k2pa_          79 -EYMANGCLLNYLR---------------EMRHRFQTQQLLEMCKDVCEAMEYLESKQ  120 (258)
T ss_dssp             -ECCTTEEHHHHHH---------------SGGGCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             -EccCCCcHHHhhh---------------ccccCCcHHHHHHHHHHHHHHHHHHhhcC
Confidence             7777777665431               22335788899999999999999999864

>d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: STE20-like serine/threonine-protein kinase, SLK
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.87  E-value=2.5e-22  Score=142.54  Aligned_cols=118  Identities=19%  Similarity=0.280  Sum_probs=100.7

Q ss_pred             CCeeecceecccCCeeEEEEE-EcCCCEEEEEEeeccCccchhHHHHHHHHHhcccccCCCeeeeecceecCCCcccchh
Q 039630           34 NGFRTSNKIGEGGFGSVYKGR-LEDGTVVAVNVLSVESKQGETEFMSEVASMANINICHENLVKLHGGCIDGPSRILAPL  112 (174)
Q Consensus        34 ~~~~~~~~lg~G~~g~V~~~~-~~~~~~~avK~~~~~~~~~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~~~~~~~lv~~  112 (174)
                      +.|++++.||+|+||.||+|. ..++..||+|+++.......+.+.+|+.++++++  ||||+++++++.+.+..++|+ 
T Consensus        12 d~Y~i~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~E~~il~~l~--HpnIv~l~~~~~~~~~~~lvm-   88 (288)
T d2jfla1          12 DFWEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCD--HPNIVKLLDAFYYENNLWILI-   88 (288)
T ss_dssp             GTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECSSSGGGGGTHHHHHHHHHCC--CTTBCCEEEEEEETTEEEEEE-
T ss_pred             cCeEEeEEEeeCCCcEEEEEEECCCCeEEEEEEECcCCHHHHHHHHHHHHHHHhCC--CCCCCeEEEEEeeCCeEEEEE-
Confidence            458999999999999999999 5678999999998776667778999999999999  999999999999999988888 


Q ss_pred             hhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhcc
Q 039630          113 QASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEI  170 (174)
Q Consensus       113 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  170 (174)
                       ++.+++.+...+..               ....+++..+..++.|++.||.|||++.
T Consensus        89 -Ey~~~g~L~~~~~~---------------~~~~l~e~~~~~i~~qi~~gL~ylH~~~  130 (288)
T d2jfla1          89 -EFCAGGAVDAVMLE---------------LERPLTESQIQVVCKQTLDALNYLHDNK  130 (288)
T ss_dssp             -ECCTTEEHHHHHHH---------------HTSCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             -ecCCCCcHHHHHHh---------------cCCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence             77777777654321               1235889999999999999999998753

>d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase Itk/Tsk
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.87  E-value=6.3e-22  Score=138.87  Aligned_cols=118  Identities=25%  Similarity=0.365  Sum_probs=100.0

Q ss_pred             cCCeeecceecccCCeeEEEEEEcCCCEEEEEEeeccCccchhHHHHHHHHHhcccccCCCeeeeecceecCCCcccchh
Q 039630           33 TNGFRTSNKIGEGGFGSVYKGRLEDGTVVAVNVLSVESKQGETEFMSEVASMANINICHENLVKLHGGCIDGPSRILAPL  112 (174)
Q Consensus        33 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~avK~~~~~~~~~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~~~~~~~lv~~  112 (174)
                      .++|+..+.||+|+||.||+|.+.++..||||.++.. ....+.+.+|+.++++++  ||||++++|++...+..++++ 
T Consensus         4 p~~~~~~~~iG~G~fg~Vy~~~~~~~~~vAvK~i~~~-~~~~~~~~~E~~~l~~l~--HpnIv~~~g~~~~~~~~~lv~-   79 (263)
T d1sm2a_           4 PSELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREG-AMSEEDFIEEAEVMMKLS--HPKLVQLYGVCLEQAPICLVF-   79 (263)
T ss_dssp             CSCEEEEEEEECCSSCCEEEEEETTTEEEEEEECCSS-SSCHHHHHHHHHHHHHCC--CTTBCCEEEEECSSSSCEEEE-
T ss_pred             hHHcEEEEEEeeCCCeEEEEEEECCCCEEEEEEECCC-cCcHHHHHHHHHHHHhcC--CCCcccccceeccCCceEEEE-
Confidence            4578999999999999999999888889999999754 344567999999999999  999999999999999999988 


Q ss_pred             hhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhcc
Q 039630          113 QASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEI  170 (174)
Q Consensus       113 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  170 (174)
                       ++.+++.+...+.               .....+++..+..++.|||.||+|||++.
T Consensus        80 -E~~~~g~L~~~l~---------------~~~~~~~~~~~~~i~~qia~gl~~lH~~~  121 (263)
T d1sm2a_          80 -EFMEHGCLSDYLR---------------TQRGLFAAETLLGMCLDVCEGMAYLEEAC  121 (263)
T ss_dssp             -ECCTTCBHHHHHH---------------TTTTCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             -EecCCCcHHHHhh---------------ccccCCCHHHHHHHHHHHHHHHHhhhccc
Confidence             7788777766431               22235788999999999999999999864

>d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Lymphocyte kinase (lck)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.86  E-value=2.7e-22  Score=141.37  Aligned_cols=125  Identities=24%  Similarity=0.350  Sum_probs=101.4

Q ss_pred             hhhHHhhcCCeeecceecccCCeeEEEEEEcCCCEEEEEEeeccCccchhHHHHHHHHHhcccccCCCeeeeecceecCC
Q 039630           26 YNELKIATNGFRTSNKIGEGGFGSVYKGRLEDGTVVAVNVLSVESKQGETEFMSEVASMANINICHENLVKLHGGCIDGP  105 (174)
Q Consensus        26 ~~~~~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~avK~~~~~~~~~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~~~~  105 (174)
                      -++|+++.++|++.+.||+|+||.||+|..+++..||||+++.. ....+.+.+|+.++.+++  ||||++++|++.. +
T Consensus         5 ~~~wei~~~~~~~~~~iG~G~fg~Vy~~~~~~~~~vAvK~~~~~-~~~~~~~~~E~~~l~~l~--HpnIv~~~g~~~~-~   80 (272)
T d1qpca_           5 EDEWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQG-SMSPDAFLAEANLMKQLQ--HQRLVRLYAVVTQ-E   80 (272)
T ss_dssp             TCTTBCCGGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTT-SSCHHHHHHHHHHHHHCC--CTTBCCEEEEECS-S
T ss_pred             CCCeecCHHHeEEeEEEecCCCcEEEEEEECCCCEEEEEEEccC-cCCHHHHHHHHHHHHhCC--CCCEeEEEeeecc-C
Confidence            35677778899999999999999999999888889999999754 345667999999999999  9999999998754 5


Q ss_pred             CcccchhhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhcc
Q 039630          106 SRILAPLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEI  170 (174)
Q Consensus       106 ~~~lv~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  170 (174)
                      ..++|+  ++.+.+.+...+.              ......+++..++.++.||+.||.|||++.
T Consensus        81 ~~~iv~--Ey~~~g~L~~~~~--------------~~~~~~l~~~~~~~i~~qi~~gl~~lH~~~  129 (272)
T d1qpca_          81 PIYIIT--EYMENGSLVDFLK--------------TPSGIKLTINKLLDMAAQIAEGMAFIEERN  129 (272)
T ss_dssp             SCEEEE--ECCTTCBHHHHTT--------------SHHHHTCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             CeEEEE--EeCCCCcHHHHHh--------------hcCCCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            567777  7777777665321              112234899999999999999999998753

>d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell cycle checkpoint kinase chk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.86  E-value=4.4e-22  Score=140.12  Aligned_cols=117  Identities=20%  Similarity=0.277  Sum_probs=95.9

Q ss_pred             CCeeecceecccCCeeEEEEE-EcCCCEEEEEEeeccC-ccchhHHHHHHHHHhcccccCCCeeeeecceecCCCcccch
Q 039630           34 NGFRTSNKIGEGGFGSVYKGR-LEDGTVVAVNVLSVES-KQGETEFMSEVASMANINICHENLVKLHGGCIDGPSRILAP  111 (174)
Q Consensus        34 ~~~~~~~~lg~G~~g~V~~~~-~~~~~~~avK~~~~~~-~~~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~~~~~~~lv~  111 (174)
                      ++|++++.||+|+||.||+|. ..+|+.||+|+++... ....+.+.+|+.+++.++  ||||+++++++.+.+..++|+
T Consensus         5 ~dy~~~~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~Ei~~l~~l~--HpnIv~~~~~~~~~~~~~ivm   82 (271)
T d1nvra_           5 EDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLN--HENVVKFYGHRREGNIQYLFL   82 (271)
T ss_dssp             TEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC-------CHHHHHHHHHTCC--CTTBCCEEEEEEETTEEEEEE
T ss_pred             cceEEEEEEecCcCeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHhCC--CCCEeeEeeeeccCceeEEEE
Confidence            469999999999999999999 5679999999997653 334567899999999999  999999999999999888888


Q ss_pred             hhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhcc
Q 039630          112 LQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEI  170 (174)
Q Consensus       112 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  170 (174)
                        |+.+++.|...+                .....+++..+..++.|++.||+|||++.
T Consensus        83 --Ey~~gg~L~~~l----------------~~~~~l~e~~~~~i~~qi~~al~ylH~~~  123 (271)
T d1nvra_          83 --EYCSGGELFDRI----------------EPDIGMPEPDAQRFFHQLMAGVVYLHGIG  123 (271)
T ss_dssp             --ECCTTEEGGGGS----------------BTTTBCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             --eccCCCcHHHHH----------------hcCCCCCHHHHHHHHHHHHHHHHHHHHcC
Confidence              777777766532                22346899999999999999999999853

>d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: pak1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.86  E-value=3.7e-22  Score=141.95  Aligned_cols=116  Identities=16%  Similarity=0.239  Sum_probs=99.5

Q ss_pred             CCeeecceecccCCeeEEEEE-EcCCCEEEEEEeeccCccchhHHHHHHHHHhcccccCCCeeeeecceecCCCcccchh
Q 039630           34 NGFRTSNKIGEGGFGSVYKGR-LEDGTVVAVNVLSVESKQGETEFMSEVASMANINICHENLVKLHGGCIDGPSRILAPL  112 (174)
Q Consensus        34 ~~~~~~~~lg~G~~g~V~~~~-~~~~~~~avK~~~~~~~~~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~~~~~~~lv~~  112 (174)
                      ++|+..+.||+|+||.||+|. ..+|+.||+|+++.......+.+.+|+.+++.++  ||||+++++++...+..++|+ 
T Consensus        20 ~~Y~~~~~iG~G~fg~Vy~a~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~il~~l~--HpnIv~~~~~~~~~~~~~ivm-   96 (293)
T d1yhwa1          20 KKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENK--NPNIVNYLDSYLVGDELWVVM-   96 (293)
T ss_dssp             TTBCSCEECCCSSSCEEEEEEBTTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHHCC--CTTBCCEEEEEEETTEEEEEE-
T ss_pred             cccEEEEEEecCcCcEEEEEEECCCCCEEEEEEEecccChHHHHHHHHHHHHHhCC--CCCEeeEeEEEEECCEEEEEE-
Confidence            469999999999999999999 5679999999998765556778999999999999  999999999999999888888 


Q ss_pred             hhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhcc
Q 039630          113 QASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEI  170 (174)
Q Consensus       113 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  170 (174)
                       ++.+++.|.....                 ...+++..+..++.||+.||.|||++.
T Consensus        97 -Ey~~gg~L~~~~~-----------------~~~l~~~~~~~i~~qi~~aL~yLH~~~  136 (293)
T d1yhwa1          97 -EYLAGGSLTDVVT-----------------ETCMDEGQIAAVCRECLQALEFLHSNQ  136 (293)
T ss_dssp             -ECCTTCBHHHHHH-----------------HSCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             -EecCCCcHHHHhh-----------------ccCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence             7777777655221                 124789999999999999999999853

>d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: Caenorhabditis elegans, pjk4 [TaxId: 6239]

Probab=99.86  E-value=7.5e-22  Score=143.55  Aligned_cols=118  Identities=20%  Similarity=0.303  Sum_probs=101.0

Q ss_pred             CCeeecceecccCCeeEEEEE-EcCCCEEEEEEeeccCccchhHHHHHHHHHhcccccCCCeeeeecceecCCCcccchh
Q 039630           34 NGFRTSNKIGEGGFGSVYKGR-LEDGTVVAVNVLSVESKQGETEFMSEVASMANINICHENLVKLHGGCIDGPSRILAPL  112 (174)
Q Consensus        34 ~~~~~~~~lg~G~~g~V~~~~-~~~~~~~avK~~~~~~~~~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~~~~~~~lv~~  112 (174)
                      ++|++++.||+|+||.||+|. ..+|..||+|++........+.+.+|+.++++++  ||||+++++++.+.+..++|+ 
T Consensus        26 ~~Y~i~~~lG~G~fg~Vy~~~~~~~g~~vAvK~i~~~~~~~~~~~~~E~~il~~l~--HpnIv~~~~~~~~~~~~~ivm-  102 (350)
T d1koaa2          26 DHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLR--HPTLVNLHDAFEDDNEMVMIY-  102 (350)
T ss_dssp             GTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECCCSHHHHHHHHHHHHHHHHTC--CTTBCCEEEEEEETTEEEEEE-
T ss_pred             cCeEEEEEEecCcCeEEEEEEECCCCCEEEEEEEcccchhhHHHHHHHHHHHHhCC--CCCCCcEEEEEEECCEEEEEE-
Confidence            579999999999999999999 5679999999997665555677899999999999  999999999999999988888 


Q ss_pred             hhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhcc
Q 039630          113 QASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEI  170 (174)
Q Consensus       113 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  170 (174)
                       ++++++.|...+.               .....+++..+..++.||+.||.|||++.
T Consensus       103 -E~~~gg~L~~~l~---------------~~~~~l~e~~~~~i~~qi~~aL~ylH~~~  144 (350)
T d1koaa2         103 -EFMSGGELFEKVA---------------DEHNKMSEDEAVEYMRQVCKGLCHMHENN  144 (350)
T ss_dssp             -CCCCSCBHHHHHT---------------CTTSCBCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             -EcCCCCCHHHHHH---------------hhcCCCCHHHHHHHHHHHHHHHHHHHhcC
Confidence             7777777766441               22345899999999999999999999864

>d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]

Probab=99.85  E-value=1e-21  Score=142.88  Aligned_cols=118  Identities=19%  Similarity=0.274  Sum_probs=100.1

Q ss_pred             CCeeecceecccCCeeEEEEE-EcCCCEEEEEEeeccCccchhHHHHHHHHHhcccccCCCeeeeecceecCCCcccchh
Q 039630           34 NGFRTSNKIGEGGFGSVYKGR-LEDGTVVAVNVLSVESKQGETEFMSEVASMANINICHENLVKLHGGCIDGPSRILAPL  112 (174)
Q Consensus        34 ~~~~~~~~lg~G~~g~V~~~~-~~~~~~~avK~~~~~~~~~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~~~~~~~lv~~  112 (174)
                      +.|++++.||+|+||.||+|. ..+|+.||+|+++.........+.+|+.+++.++  ||||+++++++...+..++|+ 
T Consensus        29 d~Y~i~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~--HpnIv~~~~~~~~~~~~~ivm-  105 (352)
T d1koba_          29 DYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLH--HPKLINLHDAFEDKYEMVLIL-  105 (352)
T ss_dssp             GTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCC--STTBCCEEEEEECSSEEEEEE-
T ss_pred             cceEEEEEEecCCCeEEEEEEECCCCCEEEEEEECCcchhHHHHHHHHHHHHHhCC--CCCCCcEEEEEEECCEEEEEE-
Confidence            469999999999999999999 5679999999998665555667889999999999  999999999999998888888 


Q ss_pred             hhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhcc
Q 039630          113 QASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEI  170 (174)
Q Consensus       113 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  170 (174)
                       ++++++.|...+               ......+++..+..++.||+.||.|||++.
T Consensus       106 -E~~~gg~L~~~~---------------~~~~~~l~e~~~~~i~~qi~~aL~ylH~~~  147 (352)
T d1koba_         106 -EFLSGGELFDRI---------------AAEDYKMSEAEVINYMRQACEGLKHMHEHS  147 (352)
T ss_dssp             -ECCCCCBHHHHT---------------TCTTCCBCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             -EcCCCChHHHHH---------------HhcCCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence             777777775533               122345899999999999999999999753

>d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: B-Raf kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.85  E-value=8e-22  Score=139.16  Aligned_cols=121  Identities=29%  Similarity=0.458  Sum_probs=97.3

Q ss_pred             hHHhhcCCeeecceecccCCeeEEEEEEcCCCEEEEEEeecc--CccchhHHHHHHHHHhcccccCCCeeeeecceecCC
Q 039630           28 ELKIATNGFRTSNKIGEGGFGSVYKGRLEDGTVVAVNVLSVE--SKQGETEFMSEVASMANINICHENLVKLHGGCIDGP  105 (174)
Q Consensus        28 ~~~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~avK~~~~~--~~~~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~~~~  105 (174)
                      +|++..++|.+.+.||+|+||.||+|..+  ..||||+++..  .......+.+|+.++.+++  ||||+++++++.. +
T Consensus         2 dwei~~~~~~~~~~lG~G~fg~Vy~~~~~--~~vAvK~~~~~~~~~~~~~~~~~E~~~l~~l~--HpnIv~~~~~~~~-~   76 (276)
T d1uwha_           2 DWEIPDGQITVGQRIGSGSFGTVYKGKWH--GDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTR--HVNILLFMGYSTA-P   76 (276)
T ss_dssp             CCBCCTTCCCCCSEEEECSSCEEEEEESS--SEEEEEECCCSSCCTTHHHHHHHHHHHHTTCC--CTTBCCEEEEECS-S
T ss_pred             CcccccccEEEEEEEeeCCCcEEEEEEEC--CEEEEEEEEcccCCHHHHHHHHHHHHHHHhCC--CCCEeeeeEEEec-c
Confidence            56677788999999999999999999754  35999999755  2344677999999999999  9999999998754 5


Q ss_pred             CcccchhhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhcc
Q 039630          106 SRILAPLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEI  170 (174)
Q Consensus       106 ~~~lv~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  170 (174)
                      ..++++  ++.+++.|...+.               .....+++..++.++.|||.||+|||++.
T Consensus        77 ~~~lv~--Ey~~~g~L~~~l~---------------~~~~~~~~~~~~~i~~qi~~gl~yLH~~~  124 (276)
T d1uwha_          77 QLAIVT--QWCEGSSLYHHLH---------------IIETKFEMIKLIDIARQTAQGMDYLHAKS  124 (276)
T ss_dssp             SCEEEE--ECCCEEEHHHHHH---------------TSCCCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             EEEEEE--ecCCCCCHHHHHh---------------hccCCCCHHHHHHHHHHHHHHHHHHhcCC
Confidence            567777  7777777766442               12235889999999999999999999863

>d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-src tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.85  E-value=1.3e-21  Score=138.53  Aligned_cols=126  Identities=23%  Similarity=0.315  Sum_probs=101.1

Q ss_pred             chhhHHhhcCCeeecceecccCCeeEEEEEEcCCCEEEEEEeeccCccchhHHHHHHHHHhcccccCCCeeeeecceecC
Q 039630           25 SYNELKIATNGFRTSNKIGEGGFGSVYKGRLEDGTVVAVNVLSVESKQGETEFMSEVASMANINICHENLVKLHGGCIDG  104 (174)
Q Consensus        25 ~~~~~~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~avK~~~~~~~~~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~~~  104 (174)
                      .-++|.+..++|++.+.||+|+||.||+|..+++..||||+++.. ....+.+.+|+.++.+++  |+||++++|++. .
T Consensus         8 ~~~~~~i~~~~~~i~~~iG~G~fg~Vy~~~~~~~~~vAiK~l~~~-~~~~~~~~~E~~~l~~l~--h~nIv~~~g~~~-~   83 (285)
T d1fmka3           8 AKDAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPG-TMSPEAFLQEAQVMKKLR--HEKLVQLYAVVS-E   83 (285)
T ss_dssp             STTCSBCCGGGEEEEEEEEECSSCEEEEEEETTTEEEEEEECCTT-SSCHHHHHHHHHHHHHCC--CTTBCCEEEEEC-S
T ss_pred             CCcceEcCHHHEEEeeEEeeCCCeEEEEEEECCCCEEEEEEECcc-cCCHHHHHHHHHHHHhcc--cCCEeEEEEEEe-c
Confidence            334566666789999999999999999999887788999999754 344567999999999999  999999999885 4


Q ss_pred             CCcccchhhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhcc
Q 039630          105 PSRILAPLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEI  170 (174)
Q Consensus       105 ~~~~lv~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  170 (174)
                      +..++|+  ++.+++.+...+..              .....+++..++.++.||+.||+|||++.
T Consensus        84 ~~~~lv~--Ey~~~g~l~~~~~~--------------~~~~~l~~~~~~~i~~~i~~gl~~LH~~~  133 (285)
T d1fmka3          84 EPIYIVT--EYMSKGSLLDFLKG--------------ETGKYLRLPQLVDMAAQIASGMAYVERMN  133 (285)
T ss_dssp             SSCEEEE--CCCTTCBHHHHHSH--------------HHHTTCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             CCeEEEE--EecCCCchhhhhhh--------------cccccchHHHHHHHHHHHHHHHHHHhhhh
Confidence            5677777  77777665543311              12235899999999999999999999864

>d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.85  E-value=5.5e-22  Score=142.92  Aligned_cols=118  Identities=17%  Similarity=0.267  Sum_probs=99.4

Q ss_pred             hcCCeeecceecccCCeeEEEEE-EcCCCEEEEEEeeccC-ccchhHHHHHHHHHhcccccCCCeeeeecceecCCCccc
Q 039630           32 ATNGFRTSNKIGEGGFGSVYKGR-LEDGTVVAVNVLSVES-KQGETEFMSEVASMANINICHENLVKLHGGCIDGPSRIL  109 (174)
Q Consensus        32 ~~~~~~~~~~lg~G~~g~V~~~~-~~~~~~~avK~~~~~~-~~~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~~~~~~~l  109 (174)
                      ..++|++++.||+|+||.||+|. ..+|+.||+|+++... ......+.+|+.+|+.++  ||||+++++++.+.+..++
T Consensus         4 ~~d~y~~~~~iG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~Ei~il~~l~--HpnIv~l~~~~~~~~~~~i   81 (322)
T d1s9ja_           4 KDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECN--SPYIVGFYGAFYSDGEISI   81 (322)
T ss_dssp             CGGGEEEEEEEECCSSCCEEEEEETTTTEEEEEEEEECCCCTTHHHHHHHHGGGGGGCC--CTTBCCEEEEEECSSEEEE
T ss_pred             CccCCEEEEEEecCCCeEEEEEEECCCCcEEEEEEEChhhCHHHHHHHHHHHHHHHhCC--CCCCCcEEEEEEECCEEEE
Confidence            45679999999999999999999 5678999999997653 334567899999999999  9999999999999999998


Q ss_pred             chhhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhc
Q 039630          110 APLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEE  169 (174)
Q Consensus       110 v~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~  169 (174)
                      |+  |+.+++.|...+.                +...+++..+..++.|++.||.|||++
T Consensus        82 Vm--Ey~~gg~L~~~l~----------------~~~~l~~~~~~~~~~qil~aL~yLH~~  123 (322)
T d1s9ja_          82 CM--EHMDGGSLDQVLK----------------KAGRIPEQILGKVSIAVIKGLTYLREK  123 (322)
T ss_dssp             EE--ECCTTEEHHHHHH----------------HHSSCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred             EE--EcCCCCcHHHHHh----------------hcCCCCHHHHHHHHHHHHHHHHHHHHh
Confidence            88  7777777765432                123578999999999999999999974

>d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Death-associated protein kinase, Dap
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.84  E-value=3.2e-21  Score=137.18  Aligned_cols=117  Identities=22%  Similarity=0.279  Sum_probs=98.1

Q ss_pred             CCeeecceecccCCeeEEEEE-EcCCCEEEEEEeeccC------ccchhHHHHHHHHHhcccccCCCeeeeecceecCCC
Q 039630           34 NGFRTSNKIGEGGFGSVYKGR-LEDGTVVAVNVLSVES------KQGETEFMSEVASMANINICHENLVKLHGGCIDGPS  106 (174)
Q Consensus        34 ~~~~~~~~lg~G~~g~V~~~~-~~~~~~~avK~~~~~~------~~~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~~~~~  106 (174)
                      +.|++++.||+|+||.||+|. ..+|+.||+|+++...      ....+.+.+|+.+|++++  ||||+++++++.+.+.
T Consensus        10 d~Y~~~~~lG~G~fg~Vy~~~~~~~~~~~AvK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~--HpnIv~~~~~~~~~~~   87 (293)
T d1jksa_          10 DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ--HPNVITLHEVYENKTD   87 (293)
T ss_dssp             GTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHCC--CTTBCCEEEEEECSSE
T ss_pred             cCEEEeEEEecCCCeEEEEEEECCCCCEEEEEEEEhhhcchhhhhHHHHHHHHHHHHHHhCC--CCCCCcEEEEEEECCE
Confidence            569999999999999999999 4679999999997542      123567899999999999  9999999999999999


Q ss_pred             cccchhhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhcc
Q 039630          107 RILAPLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEI  170 (174)
Q Consensus       107 ~~lv~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  170 (174)
                      .++++  |+++++.|...+.                ....+++..+..++.|++.||+|||++.
T Consensus        88 ~~iv~--E~~~gg~L~~~i~----------------~~~~l~~~~~~~~~~qi~~al~yLH~~~  133 (293)
T d1jksa_          88 VILIL--ELVAGGELFDFLA----------------EKESLTEEEATEFLKQILNGVYYLHSLQ  133 (293)
T ss_dssp             EEEEE--ECCCSCBHHHHHH----------------HHSSCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             EEEEE--EcCCCccccchhc----------------cccccchhHHHHHHHHHHHHHHhhhhcc
Confidence            88888  7777777765432                1235899999999999999999999764

>d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Aurora-related kinase 1 (aurora-2)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.84  E-value=1.8e-21  Score=136.40  Aligned_cols=117  Identities=23%  Similarity=0.325  Sum_probs=98.3

Q ss_pred             CCeeecceecccCCeeEEEEE-EcCCCEEEEEEeecc---CccchhHHHHHHHHHhcccccCCCeeeeecceecCCCccc
Q 039630           34 NGFRTSNKIGEGGFGSVYKGR-LEDGTVVAVNVLSVE---SKQGETEFMSEVASMANINICHENLVKLHGGCIDGPSRIL  109 (174)
Q Consensus        34 ~~~~~~~~lg~G~~g~V~~~~-~~~~~~~avK~~~~~---~~~~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~~~~~~~l  109 (174)
                      ++|++++.||+|+||.||+|. ..+++.||+|++...   .......+.+|+.+++.++  ||||+++++++.+.+..++
T Consensus         6 ~dy~i~~~iG~G~fg~Vy~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~--hpnIv~~~~~~~~~~~~~i   83 (263)
T d2j4za1           6 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR--HPNILRLYGYFHDATRVYL   83 (263)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCC--CTTBCCEEEEEECSSEEEE
T ss_pred             hHeEEEEEEecCCCcEEEEEEECCCCcEEEEEEEchHHccChHHHHHHHHHHHHHHhcC--CCCCCeEEEEEEECCEEEE
Confidence            469999999999999999999 467899999999744   2344667899999999999  9999999999999999888


Q ss_pred             chhhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhcc
Q 039630          110 APLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEI  170 (174)
Q Consensus       110 v~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  170 (174)
                      |+  |+.+++.+...+.                ....+++..+..++.||+.||+|||++.
T Consensus        84 vm--Ey~~~g~L~~~l~----------------~~~~l~e~~~~~i~~qi~~al~~lH~~~  126 (263)
T d2j4za1          84 IL--EYAPLGTVYRELQ----------------KLSKFDEQRTATYITELANALSYCHSKR  126 (263)
T ss_dssp             EE--ECCTTCBHHHHHH----------------HHSSCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             EE--eecCCCcHHHHHh----------------hcCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            88  7777777765432                2235789999999999999999999854

>d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase ZAP-70
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.84  E-value=2.6e-21  Score=137.05  Aligned_cols=119  Identities=24%  Similarity=0.342  Sum_probs=94.1

Q ss_pred             hhcCCeeecce-ecccCCeeEEEEEEc---CCCEEEEEEeeccC-ccchhHHHHHHHHHhcccccCCCeeeeecceecCC
Q 039630           31 IATNGFRTSNK-IGEGGFGSVYKGRLE---DGTVVAVNVLSVES-KQGETEFMSEVASMANINICHENLVKLHGGCIDGP  105 (174)
Q Consensus        31 ~~~~~~~~~~~-lg~G~~g~V~~~~~~---~~~~~avK~~~~~~-~~~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~~~~  105 (174)
                      +..+++.+.+. ||+|+||.||+|..+   ++..||||+++... ....+.+.+|+.++.+++  ||||++++|++.. +
T Consensus         5 l~~~~~~~~~~~iG~G~fg~Vy~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~E~~il~~l~--HpnIv~l~g~~~~-~   81 (285)
T d1u59a_           5 LKRDNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLD--NPYIVRLIGVCQA-E   81 (285)
T ss_dssp             CCGGGEEEEEEEEECCTTEEEEEEEEC---CCEEEEEEEECSSCCHHHHHHHHHHHHHHHHCC--CTTBCCEEEEEES-S
T ss_pred             ecccCeEECCcEEecccCeEEEEEEEecCCCcEEEEEEEEChhcCHHHHHHHHHHHHHHHhCC--CCCEeeEeeeecc-C
Confidence            34456777774 999999999999843   35589999997553 344677999999999999  9999999998865 4


Q ss_pred             CcccchhhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhc
Q 039630          106 SRILAPLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEE  169 (174)
Q Consensus       106 ~~~lv~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~  169 (174)
                      ..++|+  |+.+++.|...+               ...+..+++..+..++.|+|.||+|||++
T Consensus        82 ~~~lvm--E~~~~g~L~~~l---------------~~~~~~l~~~~~~~i~~qi~~gL~ylH~~  128 (285)
T d1u59a_          82 ALMLVM--EMAGGGPLHKFL---------------VGKREEIPVSNVAELLHQVSMGMKYLEEK  128 (285)
T ss_dssp             SEEEEE--ECCTTEEHHHHH---------------TTCTTTSCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             eEEEEE--EeCCCCcHHHHh---------------hccccCCCHHHHHHHHHHHHHHHHHHHhC
Confidence            577777  777777776533               12234589999999999999999999985

>d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Titin, kinase domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.84  E-value=4.3e-21  Score=138.10  Aligned_cols=117  Identities=15%  Similarity=0.239  Sum_probs=98.0

Q ss_pred             CCeeecceecccCCeeEEEEE-EcCCCEEEEEEeeccCccchhHHHHHHHHHhcccccCCCeeeeecceecCCCcccchh
Q 039630           34 NGFRTSNKIGEGGFGSVYKGR-LEDGTVVAVNVLSVESKQGETEFMSEVASMANINICHENLVKLHGGCIDGPSRILAPL  112 (174)
Q Consensus        34 ~~~~~~~~lg~G~~g~V~~~~-~~~~~~~avK~~~~~~~~~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~~~~~~~lv~~  112 (174)
                      ++|++++.||+|+||.||+|. ..+++.||+|+++... .....+.+|+.+|+.++  ||||+++++++.+.+..++|+ 
T Consensus         5 ~rY~i~~~lG~G~fg~Vy~~~~~~~~~~~AiK~i~~~~-~~~~~~~~Ei~il~~l~--HpnIv~~~~~~~~~~~~~lvm-   80 (321)
T d1tkia_           5 EKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKG-TDQVLVKKEISILNIAR--HRNILHLHESFESMEELVMIF-   80 (321)
T ss_dssp             TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCT-HHHHHHHHHHHHHHHSC--CTTBCCEEEEEEETTEEEEEE-
T ss_pred             cceEEEEEEecCCCeEEEEEEECCCCcEEEEEEEcCCc-ccHHHHHHHHHHHHhCC--CCCCCeEEEEEEECCEEEEEE-
Confidence            569999999999999999999 4678899999997553 33456889999999999  999999999999999999988 


Q ss_pred             hhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhcc
Q 039630          113 QASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEI  170 (174)
Q Consensus       113 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  170 (174)
                       |+++++.|...+.               .....+++..+..++.||+.||.|||++.
T Consensus        81 -E~~~gg~L~~~i~---------------~~~~~l~e~~~~~i~~qi~~al~yLH~~~  122 (321)
T d1tkia_          81 -EFISGLDIFERIN---------------TSAFELNEREIVSYVHQVCEALQFLHSHN  122 (321)
T ss_dssp             -CCCCCCBHHHHHT---------------SSSCCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             -ecCCCCcHHHHHH---------------hcCCCCCHHHHHHHHHHHHHHHHHHHHcC
Confidence             7777777765431               12235899999999999999999999753

>d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Calmodulin-dependent protein kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.84  E-value=1.1e-21  Score=140.33  Aligned_cols=118  Identities=17%  Similarity=0.265  Sum_probs=94.4

Q ss_pred             cCCeeecceecccCCeeEEEEE-EcCCCEEEEEEeeccC-ccchhHHHHHHHHHhcccccCCCeeeeecceecCCCcccc
Q 039630           33 TNGFRTSNKIGEGGFGSVYKGR-LEDGTVVAVNVLSVES-KQGETEFMSEVASMANINICHENLVKLHGGCIDGPSRILA  110 (174)
Q Consensus        33 ~~~~~~~~~lg~G~~g~V~~~~-~~~~~~~avK~~~~~~-~~~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~~~~~~~lv  110 (174)
                      .+.|++.+.||+|+||.||+|. ..+++.||+|++.... ......+.+|+.+++.++  ||||+++++++.+.+..+++
T Consensus         8 ~d~Y~~~~~lG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~Ei~il~~l~--HpnIv~l~~~~~~~~~~~lv   85 (307)
T d1a06a_           8 RDIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKKALEGKEGSMENEIAVLHKIK--HPNIVALDDIYESGGHLYLI   85 (307)
T ss_dssp             GGTEEEEEESBSGGGGGEEEEEETTTCCEEEEEEEEC----------CHHHHHHHTCC--CTTBCCEEEEEECSSEEEEE
T ss_pred             ccceEEEEEEeeccCeEEEEEEECCCCCEEEEEEEchHHhhhHHHHHHHHHHHHHhCC--CCCCCcEEEEEEECCEEEEE
Confidence            3569999999999999999999 5678999999997553 233456789999999999  99999999999999988888


Q ss_pred             hhhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhcc
Q 039630          111 PLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEI  170 (174)
Q Consensus       111 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  170 (174)
                      +  |+.+++.|...+.                ....+++..+..++.|++.||+|||++.
T Consensus        86 m--E~~~gg~L~~~l~----------------~~~~l~e~~~~~~~~qi~~al~ylH~~~  127 (307)
T d1a06a_          86 M--QLVSGGELFDRIV----------------EKGFYTERDASRLIFQVLDAVKYLHDLG  127 (307)
T ss_dssp             E--CCCCSCBHHHHHH----------------TCSCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             E--eccCCCcHHHhhh----------------cccCCCHHHHHHHHHHHHHHHHhhhhce
Confidence            8  7777777766442                2235899999999999999999999863

>d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine protein kinase TAO2
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.84  E-value=3e-21  Score=138.18  Aligned_cols=116  Identities=22%  Similarity=0.329  Sum_probs=95.5

Q ss_pred             CeeecceecccCCeeEEEEE-EcCCCEEEEEEeeccCc---cchhHHHHHHHHHhcccccCCCeeeeecceecCCCcccc
Q 039630           35 GFRTSNKIGEGGFGSVYKGR-LEDGTVVAVNVLSVESK---QGETEFMSEVASMANINICHENLVKLHGGCIDGPSRILA  110 (174)
Q Consensus        35 ~~~~~~~lg~G~~g~V~~~~-~~~~~~~avK~~~~~~~---~~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~~~~~~~lv  110 (174)
                      .|+.++.||+|+||.||+|. ..++..||||+++....   ...+.+.+|+.++++++  ||||+++++++.+.+..+++
T Consensus        16 ~y~~l~~lG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~Ei~il~~l~--HpnIv~~~~~~~~~~~~~iv   93 (309)
T d1u5ra_          16 LFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLR--HPNTIQYRGCYLREHTAWLV   93 (309)
T ss_dssp             HEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEECCSSCHHHHHHHHHHHHHHHTTCC--CTTBCCEEEEEEETTEEEEE
T ss_pred             hcEeeEEEecCCCeEEEEEEECCCCcEEEEEEEchhhccCHHHHHHHHHHHHHHHHCC--CCCEeeEEEEEEECCEEEEE
Confidence            48999999999999999998 56789999999976532   23456889999999999  99999999999999999998


Q ss_pred             hhhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhcc
Q 039630          111 PLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEI  170 (174)
Q Consensus       111 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  170 (174)
                      +  +++.++.+....                .....+++..+..++.||+.||.|||++.
T Consensus        94 ~--E~~~~g~l~~~~----------------~~~~~l~e~~~~~i~~qi~~aL~yLH~~~  135 (309)
T d1u5ra_          94 M--EYCLGSASDLLE----------------VHKKPLQEVEIAAVTHGALQGLAYLHSHN  135 (309)
T ss_dssp             E--ECCSEEHHHHHH----------------HHTSCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             E--EecCCCchHHHH----------------HhCCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            8  666666554322                12235899999999999999999999863

>d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine-protein kinase Nek2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.83  E-value=1.5e-21  Score=137.34  Aligned_cols=121  Identities=21%  Similarity=0.229  Sum_probs=95.4

Q ss_pred             CCeeecceecccCCeeEEEEE-EcCCCEEEEEEeeccC--ccchhHHHHHHHHHhcccccCCCeeeeecceecC--CCcc
Q 039630           34 NGFRTSNKIGEGGFGSVYKGR-LEDGTVVAVNVLSVES--KQGETEFMSEVASMANINICHENLVKLHGGCIDG--PSRI  108 (174)
Q Consensus        34 ~~~~~~~~lg~G~~g~V~~~~-~~~~~~~avK~~~~~~--~~~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~~~--~~~~  108 (174)
                      ++|++++.||+|+||.||+|. ..+|+.||+|+++...  ....+.+.+|+.++++++  ||||+++++++.+.  +..+
T Consensus         4 edy~~~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~--HpnIv~~~~~~~~~~~~~~~   81 (269)
T d2java1           4 EDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELK--HPNIVRYYDRIIDRTNTTLY   81 (269)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECCTTSCHHHHHHHHHHHHHTTSCC--CTTBCCEEEEEEC----CEE
T ss_pred             hhCEEeEEEecCCCeEEEEEEECCCCCEEEEEEEChhhCCHHHHHHHHHHHHHHHHCC--CCCEeeEEEEEEeCCCCEEE
Confidence            579999999999999999998 5679999999997653  334566899999999999  99999999998654  4466


Q ss_pred             cchhhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhcc
Q 039630          109 LAPLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEI  170 (174)
Q Consensus       109 lv~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  170 (174)
                      +++  |+.+++.|...+...            ......+++..++.++.|++.||.|||++.
T Consensus        82 ivm--Ey~~~g~L~~~i~~~------------~~~~~~l~e~~~~~i~~qi~~al~ylH~~~  129 (269)
T d2java1          82 IVM--EYCEGGDLASVITKG------------TKERQYLDEEFVLRVMTQLTLALKECHRRS  129 (269)
T ss_dssp             EEE--ECCTTEEHHHHHHHH------------HHHTCCCCHHHHHHHHHHHHHHHHHHHHHC
T ss_pred             EEE--ecCCCCcHHHHHHhc------------cccCCCCCHHHHHHHHHHHHHHHHHHHHhc
Confidence            777  777777776533211            112335899999999999999999999864

>d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: ephb2 receptor tyrosine kinase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.83  E-value=7.7e-21  Score=135.51  Aligned_cols=119  Identities=26%  Similarity=0.420  Sum_probs=96.1

Q ss_pred             cCCeeecceecccCCeeEEEEEEc-CC---CEEEEEEeecc-CccchhHHHHHHHHHhcccccCCCeeeeecceecCCCc
Q 039630           33 TNGFRTSNKIGEGGFGSVYKGRLE-DG---TVVAVNVLSVE-SKQGETEFMSEVASMANINICHENLVKLHGGCIDGPSR  107 (174)
Q Consensus        33 ~~~~~~~~~lg~G~~g~V~~~~~~-~~---~~~avK~~~~~-~~~~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~~~~~~  107 (174)
                      .++|++.+.||+|+||.||+|..+ ++   ..||||.+... .....+.+.+|+.+|++++  ||||++++|++...+..
T Consensus        25 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~--HpnIv~l~g~~~~~~~~  102 (299)
T d1jpaa_          25 ISCVKIEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFD--HPNVIHLEGVVTKSTPV  102 (299)
T ss_dssp             GGGEEEEEEEEECSSSEEEEEEECC---CCEEEEEEECCSSCCHHHHHHHHHHHHHHTTCC--CTTBCCEEEEECSSSSC
T ss_pred             hhhcEEeeEEeeCCCeEEEEEEEeCCCCEEEEEEEEEECcccCHHHHHHHHHHHHHHHhCC--CCCCccEEEEEeeCCEE
Confidence            457899999999999999999843 33   36889988654 3344567999999999999  99999999999999998


Q ss_pred             ccchhhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhcc
Q 039630          108 ILAPLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEI  170 (174)
Q Consensus       108 ~lv~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  170 (174)
                      ++++  ++.+++.+...+.               .....+++..++.++.|||.||.|||++.
T Consensus       103 ~iv~--Ey~~~g~L~~~~~---------------~~~~~l~~~~~~~i~~qia~gl~yLH~~~  148 (299)
T d1jpaa_         103 MIIT--EFMENGSLDSFLR---------------QNDGQFTVIQLVGMLRGIAAGMKYLADMN  148 (299)
T ss_dssp             EEEE--ECCTTEEHHHHHH---------------TTTTCSCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             EEEE--EecCCCcceeeec---------------cccCCCCHHHHHHHHHHHHHHHHHHhhCC
Confidence            8888  7777777765331               22335899999999999999999999864

>d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: 3-phosphoinositide dependent protein kinase-1 Pdk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.83  E-value=4.8e-21  Score=135.87  Aligned_cols=117  Identities=21%  Similarity=0.239  Sum_probs=98.3

Q ss_pred             CCeeecceecccCCeeEEEEE-EcCCCEEEEEEeecc---CccchhHHHHHHHHHhcccccCCCeeeeecceecCCCccc
Q 039630           34 NGFRTSNKIGEGGFGSVYKGR-LEDGTVVAVNVLSVE---SKQGETEFMSEVASMANINICHENLVKLHGGCIDGPSRIL  109 (174)
Q Consensus        34 ~~~~~~~~lg~G~~g~V~~~~-~~~~~~~avK~~~~~---~~~~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~~~~~~~l  109 (174)
                      ++|++.+.||+|+||.||+|. ..+++.||||+++..   .......+.+|+.++++++  ||||+++++++.+.+..++
T Consensus         8 ~dy~i~~~lG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~E~~il~~l~--HpnIv~l~~~~~~~~~~~i   85 (288)
T d1uu3a_           8 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLD--HPFFVKLYFTFQDDEKLYF   85 (288)
T ss_dssp             GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCC--STTBCCEEEEEECSSEEEE
T ss_pred             CCCEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEehHHccCHHHHHHHHHHHHHHHHcC--CCCeeEEEEEEEECCEEEE
Confidence            469999999999999999999 467999999999754   2334567899999999999  9999999999999988888


Q ss_pred             chhhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhcc
Q 039630          110 APLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEI  170 (174)
Q Consensus       110 v~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  170 (174)
                      ++  |+.+++.|...+.                ....+++..+..++.|++.||+|||++.
T Consensus        86 vm--Ey~~gg~L~~~~~----------------~~~~l~e~~~~~~~~qi~~al~ylH~~~  128 (288)
T d1uu3a_          86 GL--SYAKNGELLKYIR----------------KIGSFDETCTRFYTAEIVSALEYLHGKG  128 (288)
T ss_dssp             EE--CCCTTEEHHHHHH----------------HHSSCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             EE--EccCCCCHHHhhh----------------ccCCCCHHHHHHHHHHHHHHHHhhcccc
Confidence            88  7777777765331                2235889999999999999999999753

>d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.83  E-value=1.2e-20  Score=134.41  Aligned_cols=118  Identities=23%  Similarity=0.305  Sum_probs=93.8

Q ss_pred             CCeeecceecccCCeeEEEEE-EcCCCEEEEEEeeccC--ccchhHHHHHHHHHhcccccCCCeeeeecceecCCCcccc
Q 039630           34 NGFRTSNKIGEGGFGSVYKGR-LEDGTVVAVNVLSVES--KQGETEFMSEVASMANINICHENLVKLHGGCIDGPSRILA  110 (174)
Q Consensus        34 ~~~~~~~~lg~G~~g~V~~~~-~~~~~~~avK~~~~~~--~~~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~~~~~~~lv  110 (174)
                      ++|++++.||+|+||.||+|. ..+++.||+|+++...  ......+.+|+.++++++  ||||+++++++.+.+..+++
T Consensus         2 d~Y~~~~~lG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~--Hp~Iv~~~~~~~~~~~~~iv   79 (298)
T d1gz8a_           2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN--HPNIVKLLDVIHTENKLYLV   79 (298)
T ss_dssp             TTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEC-------CCHHHHHHHHHHTTCC--CTTBCCEEEEEEETTEEEEE
T ss_pred             CCCEeccEEecCcCeEEEEEEECCCCCEEEEEEEehhhcChHHHHHHHHHHHHHHhCC--CCcEEEeccccccccceeEE
Confidence            479999999999999999999 5779999999997552  234567899999999999  99999999999999999999


Q ss_pred             hhhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhcc
Q 039630          111 PLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEI  170 (174)
Q Consensus       111 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  170 (174)
                      +  ++...+.+....               ......+++..+..++.|++.||.|||++.
T Consensus        80 ~--e~~~~~~~~~~~---------------~~~~~~l~e~~~~~~~~qil~~L~yLH~~~  122 (298)
T d1gz8a_          80 F--EFLHQDLKKFMD---------------ASALTGIPLPLIKSYLFQLLQGLAFCHSHR  122 (298)
T ss_dssp             E--ECCSEEHHHHHH---------------HTTTTCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             E--eecCCchhhhhh---------------hhcccCCCHHHHHHHHHHHHHHHHHhhcCC
Confidence            8  544433222211               123345899999999999999999999864

>d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase wnk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.82  E-value=8.5e-21  Score=133.44  Aligned_cols=116  Identities=23%  Similarity=0.288  Sum_probs=91.1

Q ss_pred             eeecceecccCCeeEEEEE-EcCCCEEEEEEeecc--CccchhHHHHHHHHHhcccccCCCeeeeecceecC----CCcc
Q 039630           36 FRTSNKIGEGGFGSVYKGR-LEDGTVVAVNVLSVE--SKQGETEFMSEVASMANINICHENLVKLHGGCIDG----PSRI  108 (174)
Q Consensus        36 ~~~~~~lg~G~~g~V~~~~-~~~~~~~avK~~~~~--~~~~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~~~----~~~~  108 (174)
                      |+..+.||+|+||.||+|. ..++..||+|.+...  .....+.+.+|+.++++++  ||||+++++++...    ...+
T Consensus        11 ~~~~~~iG~G~fg~Vy~~~~~~~~~~va~K~i~~~~~~~~~~~~~~~E~~il~~l~--HpnIv~~~~~~~~~~~~~~~~~   88 (270)
T d1t4ha_          11 LKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQ--HPNIVRFYDSWESTVKGKKCIV   88 (270)
T ss_dssp             EEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHTTCC--CTTBCCEEEEEEEESSSCEEEE
T ss_pred             EEeeeEEecCcCcEEEEEEECCCCeEEEEEEEchhhCCHHHHHHHHHHHHHHHhCC--CCCeeeEEEEEeeccccCCEEE
Confidence            4667789999999999999 457889999999755  2334567899999999999  99999999998652    3345


Q ss_pred             cchhhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhccC
Q 039630          109 LAPLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEIK  171 (174)
Q Consensus       109 lv~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~~  171 (174)
                      +++  |+.+++.|...+.                +...+++..+..++.||+.||+|||++.+
T Consensus        89 ivm--E~~~~g~L~~~l~----------------~~~~~~~~~~~~~~~qi~~gl~yLH~~~~  133 (270)
T d1t4ha_          89 LVT--ELMTSGTLKTYLK----------------RFKVMKIKVLRSWCRQILKGLQFLHTRTP  133 (270)
T ss_dssp             EEE--ECCCSCBHHHHHH----------------HHSSCCHHHHHHHHHHHHHHHHHHHTSSS
T ss_pred             EEE--eCCCCCcHHHHHh----------------ccccccHHHHHHHHHHHHHHHHHHHHCCC
Confidence            566  6666666655331                22357899999999999999999998763

>d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: epha2 receptor tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.82  E-value=1.5e-20  Score=133.01  Aligned_cols=119  Identities=24%  Similarity=0.389  Sum_probs=94.9

Q ss_pred             cCCeeecceecccCCeeEEEEEEcCC-----CEEEEEEeecc-CccchhHHHHHHHHHhcccccCCCeeeeecceecCCC
Q 039630           33 TNGFRTSNKIGEGGFGSVYKGRLEDG-----TVVAVNVLSVE-SKQGETEFMSEVASMANINICHENLVKLHGGCIDGPS  106 (174)
Q Consensus        33 ~~~~~~~~~lg~G~~g~V~~~~~~~~-----~~~avK~~~~~-~~~~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~~~~~  106 (174)
                      .++|...++||+|+||.||+|.++..     ..||||.++.. .......+.+|+.++++++  ||||++++|++...+.
T Consensus         6 ~~~~~~~~~iG~G~fG~Vy~~~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~il~~l~--H~nIv~~~g~~~~~~~   83 (283)
T d1mqba_           6 PSCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFS--HHNIIRLEGVISKYKP   83 (283)
T ss_dssp             TTTEEEEEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTTCCHHHHHHHHHHHHHHHTCC--CTTBCCEEEEECSSSS
T ss_pred             HHHeEeeeEEeeCCCeEEEEEEEeCCCCEEEEEEEEEEECcccChHHHHHHHHHHHHHHhcC--CCCEeeeeEEEecCCc
Confidence            45788899999999999999985432     37999999754 3334557899999999999  9999999999999988


Q ss_pred             cccchhhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhcc
Q 039630          107 RILAPLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEI  170 (174)
Q Consensus       107 ~~lv~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  170 (174)
                      .++++  ++...+.+.....               .....+++..++.++.||+.||.|||++.
T Consensus        84 ~~~v~--e~~~~~~l~~~~~---------------~~~~~~~~~~~~~i~~~i~~gl~~lH~~~  130 (283)
T d1mqba_          84 MMIIT--EYMENGALDKFLR---------------EKDGEFSVLQLVGMLRGIAAGMKYLANMN  130 (283)
T ss_dssp             EEEEE--ECCTTEEHHHHHH---------------HTTTCSCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             eEEEE--EecccCcchhhhh---------------cccccccHHHHHHHHHHHHHhhhhccccc
Confidence            88888  6666665554331               12235789999999999999999999753

>d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Pkb kinase (Akt-2)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.82  E-value=1.3e-20  Score=136.28  Aligned_cols=117  Identities=23%  Similarity=0.230  Sum_probs=99.5

Q ss_pred             CCeeecceecccCCeeEEEEE-EcCCCEEEEEEeecc---CccchhHHHHHHHHHhcccccCCCeeeeecceecCCCccc
Q 039630           34 NGFRTSNKIGEGGFGSVYKGR-LEDGTVVAVNVLSVE---SKQGETEFMSEVASMANINICHENLVKLHGGCIDGPSRIL  109 (174)
Q Consensus        34 ~~~~~~~~lg~G~~g~V~~~~-~~~~~~~avK~~~~~---~~~~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~~~~~~~l  109 (174)
                      ++|++++.||+|+||.||+|. ..+|+.||+|+++..   .......+.+|+.+|+.++  ||||+++++++.+.+..++
T Consensus         5 ~dy~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l~--hp~Iv~l~~~~~~~~~~~i   82 (337)
T d1o6la_           5 NDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTR--HPFLTALKYAFQTHDRLCF   82 (337)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCC--CTTBCCEEEEEECSSEEEE
T ss_pred             HhcEEEEEEecCcCeEEEEEEECCCCCEEEEEEEchhhccCHHHHHHHHHHHHHHHhCC--CCCEEEEEeeecccccccc
Confidence            579999999999999999999 568999999999754   2345667899999999999  9999999999999999998


Q ss_pred             chhhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhcc
Q 039630          110 APLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEI  170 (174)
Q Consensus       110 v~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  170 (174)
                      |+  ++.+++.|...+.                ....+++..+..++.|++.||+|||++.
T Consensus        83 v~--ey~~gg~L~~~~~----------------~~~~~~e~~~~~~~~qil~al~ylH~~~  125 (337)
T d1o6la_          83 VM--EYANGGELFFHLS----------------RERVFTEERARFYGAEIVSALEYLHSRD  125 (337)
T ss_dssp             EE--ECCTTCBHHHHHH----------------HHSCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             ce--eccCCCchhhhhh----------------cccCCcHHHHHHHHHHHhhhhhhhhhcC
Confidence            88  7778777765432                2235788999999999999999999864

>d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: (Plasmodium falciparum) [TaxId: 5833]

Probab=99.82  E-value=4.3e-20  Score=130.84  Aligned_cols=116  Identities=21%  Similarity=0.319  Sum_probs=96.3

Q ss_pred             CCeeecceecccCCeeEEEEEEcCCCEEEEEEeeccC--ccchhHHHHHHHHHhcccccCCCeeeeecceecCCCcccch
Q 039630           34 NGFRTSNKIGEGGFGSVYKGRLEDGTVVAVNVLSVES--KQGETEFMSEVASMANINICHENLVKLHGGCIDGPSRILAP  111 (174)
Q Consensus        34 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~avK~~~~~~--~~~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~~~~~~~lv~  111 (174)
                      ++|++++.||+|+||.||+|..++|+.||||+++...  ......+.+|+.+++.++  ||||+++++.+...+..++++
T Consensus         2 ~~Y~~~~~iG~G~fg~Vy~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~--hpnIv~~~~~~~~~~~~~i~~   79 (286)
T d1ob3a_           2 EKYHGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELK--HSNIVKLYDVIHTKKRLVLVF   79 (286)
T ss_dssp             CSEEEEEEEEEETTEEEEEEEETTSCEEEEEEECCSSGGGCCCHHHHHHHHGGGGCC--CTTBCCEEEEEECSSCEEEEE
T ss_pred             CCceeccEEecCCCcEEEEEEeCCCCEEEEEEEehhhcChHHHHHHHHHHHHHHhCC--CCcEEeeeeecccCCceeEEE
Confidence            4799999999999999999998889999999997652  334567899999999999  999999999999999988888


Q ss_pred             hhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhc
Q 039630          112 LQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEE  169 (174)
Q Consensus       112 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~  169 (174)
                        ++..++.+....                .....+++..+..++.||+.||+|||++
T Consensus        80 --e~~~~~~~~~~~----------------~~~~~l~~~~~~~i~~qi~~~L~~LH~~  119 (286)
T d1ob3a_          80 --EHLDQDLKKLLD----------------VCEGGLESVTAKSFLLQLLNGIAYCHDR  119 (286)
T ss_dssp             --ECCSEEHHHHHH----------------TSTTCCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             --EeehhhhHHHHH----------------hhcCCcchhhhHHHHHHHHHHHHHhccC
Confidence              444444433311                2334689999999999999999999985

>d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: gamma-subunit of glycogen phosphorylase kinase (Phk)
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

Probab=99.82  E-value=1.9e-20  Score=132.06  Aligned_cols=118  Identities=16%  Similarity=0.169  Sum_probs=97.8

Q ss_pred             CCeeecceecccCCeeEEEEE-EcCCCEEEEEEeeccCcc---------chhHHHHHHHHHhcccccCCCeeeeecceec
Q 039630           34 NGFRTSNKIGEGGFGSVYKGR-LEDGTVVAVNVLSVESKQ---------GETEFMSEVASMANINICHENLVKLHGGCID  103 (174)
Q Consensus        34 ~~~~~~~~lg~G~~g~V~~~~-~~~~~~~avK~~~~~~~~---------~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~~  103 (174)
                      ++|++.+.||+|+||+||+|. ..+++.+|||+++.....         ..+.+.+|+.++++++ .||||+++++++.+
T Consensus         3 ~~y~~~~~iG~G~~g~V~~~~~~~~~~~~AvK~i~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~-~hpnIv~~~~~~~~   81 (277)
T d1phka_           3 ENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVS-GHPNIIQLKDTYET   81 (277)
T ss_dssp             TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHT-TCTTBCCEEEEEEC
T ss_pred             ccCEEceEEecCcCeEEEEEEECCCCCEEEEEEEecccccchhHHHHHHHHHHHHHHHHHHHHhc-CCCCeEEEEeeccc
Confidence            579999999999999999998 567899999999765221         1345889999999985 59999999999999


Q ss_pred             CCCcccchhhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhcc
Q 039630          104 GPSRILAPLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEI  170 (174)
Q Consensus       104 ~~~~~lv~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  170 (174)
                      .+..++++  ++.+++.|...+.                ....+++..+..++.||+.||+|||++.
T Consensus        82 ~~~~~ivm--E~~~~g~L~~~l~----------------~~~~l~e~~~~~~~~qi~~al~~lH~~~  130 (277)
T d1phka_          82 NTFFFLVF--DLMKKGELFDYLT----------------EKVTLSEKETRKIMRALLEVICALHKLN  130 (277)
T ss_dssp             SSEEEEEE--ECCTTCBHHHHHH----------------HHSSCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             CcceEEEE--EcCCCchHHHHHH----------------hcCCCCHHHHHHHHHHHHHHHHHHHHcC
Confidence            99989988  7777777766431                2235899999999999999999999753

>d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Carboxyl-terminal src kinase (csk)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.82  E-value=5.9e-21  Score=133.70  Aligned_cols=121  Identities=21%  Similarity=0.338  Sum_probs=96.8

Q ss_pred             HHhhcCCeeecceecccCCeeEEEEEEcCCCEEEEEEeeccCccchhHHHHHHHHHhcccccCCCeeeeecceecC-CCc
Q 039630           29 LKIATNGFRTSNKIGEGGFGSVYKGRLEDGTVVAVNVLSVESKQGETEFMSEVASMANINICHENLVKLHGGCIDG-PSR  107 (174)
Q Consensus        29 ~~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~avK~~~~~~~~~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~~~-~~~  107 (174)
                      |.+..++|++++.||+|+||.||+|..+ |..||||.++..  ...+.+.+|+.++++++  ||||++++|++... +..
T Consensus         2 w~i~~~~~~~~~~lG~G~fg~Vy~~~~~-~~~vAvK~i~~~--~~~~~~~~E~~~l~~l~--HpnIv~~~g~~~~~~~~~   76 (262)
T d1byga_           2 WALNMKELKLLQTIGKGEFGDVMLGDYR-GNKVAVKCIKND--ATAQAFLAEASVMTQLR--HSNLVQLLGVIVEEKGGL   76 (262)
T ss_dssp             CBCCGGGEEEEEEEEECSSCEEEEEEET-TEEEEEEECCCC--C--HHHHHTHHHHTTCC--CTTBCCEEEEECCC--CC
T ss_pred             CccCHHHeEEeEEEecCCCeEEEEEEEC-CeEEEEEEECcH--HHHHHHHHHHHHHHhCC--CCCEeeEEEEEEecCCcE
Confidence            4556678999999999999999999985 778999999643  34567899999999999  99999999988654 556


Q ss_pred             ccchhhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhcc
Q 039630          108 ILAPLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEI  170 (174)
Q Consensus       108 ~lv~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  170 (174)
                      ++|+  ++.+++.+...+...              ....+++..++.++.||+.||.|||++.
T Consensus        77 ~lv~--ey~~~g~L~~~l~~~--------------~~~~l~~~~~~~i~~~i~~al~ylH~~~  123 (262)
T d1byga_          77 YIVT--EYMAKGSLVDYLRSR--------------GRSVLGGDCLLKFSLDVCEAMEYLEGNN  123 (262)
T ss_dssp             EEEE--CCCTTEEHHHHHHHH--------------HHHHCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             EEEE--eccCCCCHHHHHHhc--------------CCCCCCHHHHHHHHHHHHhhccccccCc
Confidence            7888  888888777654211              1224789999999999999999999853

>d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Focal adhesion kinase 1 (fak)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.81  E-value=1.7e-20  Score=132.09  Aligned_cols=123  Identities=20%  Similarity=0.222  Sum_probs=96.3

Q ss_pred             HHhhcCCeeecceecccCCeeEEEEEEc----CCCEEEEEEeeccC-ccchhHHHHHHHHHhcccccCCCeeeeecceec
Q 039630           29 LKIATNGFRTSNKIGEGGFGSVYKGRLE----DGTVVAVNVLSVES-KQGETEFMSEVASMANINICHENLVKLHGGCID  103 (174)
Q Consensus        29 ~~~~~~~~~~~~~lg~G~~g~V~~~~~~----~~~~~avK~~~~~~-~~~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~~  103 (174)
                      |++..++|++.+.||+|+||.||+|...    .+..||+|.++... ......+.+|+.++++++  ||||+++++++. 
T Consensus         2 ~ei~~~~~~l~~~iG~G~fg~Vy~a~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~E~~~l~~l~--HpnIv~l~~~~~-   78 (273)
T d1mp8a_           2 YEIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFD--HPHIVKLIGVIT-   78 (273)
T ss_dssp             CBCCGGGEEEEEEEEECSSSEEEEEEECCC--CCEEEEEEECTTTTSHHHHHHHHHHHHHHHTCC--CTTBCCEEEEEC-
T ss_pred             CCcCHHHeEEEEEEeeCCCcEEEEEEEecCCceeEEEEEEEeccccCHHHHHHHHHHHHHHHhCC--CCCEeeEEEEEe-
Confidence            4566678999999999999999999843    23578899886543 334567999999999999  999999999985 


Q ss_pred             CCCcccchhhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhccC
Q 039630          104 GPSRILAPLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEIK  171 (174)
Q Consensus       104 ~~~~~lv~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~~  171 (174)
                      .+..++++  ++.+++.+...+.               .....+++..++.++.||+.||.|||++.-
T Consensus        79 ~~~~~iv~--E~~~~g~l~~~~~---------------~~~~~l~~~~~~~~~~qi~~gl~ylH~~~i  129 (273)
T d1mp8a_          79 ENPVWIIM--ELCTLGELRSFLQ---------------VRKYSLDLASLILYAYQLSTALAYLESKRF  129 (273)
T ss_dssp             SSSCEEEE--ECCTTEEHHHHHH---------------HTTTTSCHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred             cCeEEEEE--EeccCCcHHhhhh---------------ccCCCCCHHHHHHHHHHHHHHhhhhcccCe
Confidence            46677777  7777776655331               123357899999999999999999998643

>d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.81  E-value=2.1e-20  Score=134.15  Aligned_cols=117  Identities=22%  Similarity=0.288  Sum_probs=97.2

Q ss_pred             CCeeecceecccCCeeEEEEE-EcCCCEEEEEEeecc---CccchhHHHHHHHHHhcccccCCCeeeeecceecCCCccc
Q 039630           34 NGFRTSNKIGEGGFGSVYKGR-LEDGTVVAVNVLSVE---SKQGETEFMSEVASMANINICHENLVKLHGGCIDGPSRIL  109 (174)
Q Consensus        34 ~~~~~~~~lg~G~~g~V~~~~-~~~~~~~avK~~~~~---~~~~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~~~~~~~l  109 (174)
                      ++|++++.||+|+||.||+|. ..+|+.||+|+++..   .....+.+.+|+.+++.++  ||||+++++++.+.+..++
T Consensus         4 ~dy~i~~~lG~G~fg~Vy~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~E~~il~~l~--HpnIv~~~~~~~~~~~~~i   81 (316)
T d1fota_           4 QDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVT--HPFIIRMWGTFQDAQQIFM   81 (316)
T ss_dssp             GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCC--BTTBCCEEEEEECSSEEEE
T ss_pred             hHeEEEEEEecCcCcEEEEEEECCCCCEEEEEEEchHHccCHHHHHHHHHHHHHHHhcc--CcChhheeeeEeeCCeeee
Confidence            469999999999999999999 567999999999754   2345677899999999999  9999999999999999888


Q ss_pred             chhhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhcc
Q 039630          110 APLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEI  170 (174)
Q Consensus       110 v~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  170 (174)
                      |+  ++.+++.+.....                ....+++..+..++.||+.||+|||++.
T Consensus        82 vm--E~~~gg~l~~~~~----------------~~~~~~~~~~~~~~~qi~~al~~lH~~~  124 (316)
T d1fota_          82 IM--DYIEGGELFSLLR----------------KSQRFPNPVAKFYAAEVCLALEYLHSKD  124 (316)
T ss_dssp             EE--CCCCSCBHHHHHH----------------HTSSCCHHHHHHHHHHHHHHHHHHHTTT
T ss_pred             Ee--eecCCcccccccc----------------ccccccccHHHHHHHHHHHhhhhhccCc
Confidence            88  7777666555331                2234678888889999999999999864

>d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Musk tyrosine kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.81  E-value=4.1e-20  Score=131.87  Aligned_cols=140  Identities=29%  Similarity=0.331  Sum_probs=103.2

Q ss_pred             hhHHhhcCCeeecceecccCCeeEEEEEEc------CCCEEEEEEeeccC-ccchhHHHHHHHHHhcccccCCCeeeeec
Q 039630           27 NELKIATNGFRTSNKIGEGGFGSVYKGRLE------DGTVVAVNVLSVES-KQGETEFMSEVASMANINICHENLVKLHG   99 (174)
Q Consensus        27 ~~~~~~~~~~~~~~~lg~G~~g~V~~~~~~------~~~~~avK~~~~~~-~~~~~~~~~e~~~l~~l~~~h~~i~~~~~   99 (174)
                      .+++.++++|++++.||+|+||.||+|++.      +++.||||+++... ......+.+|+.+++.++  |+|++++++
T Consensus         6 ~~~e~p~~~~~~~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~E~~il~~l~--h~niv~~~~   83 (301)
T d1lufa_           6 LSLEYPRNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFD--NPNIVKLLG   83 (301)
T ss_dssp             HHTBCCGGGCEEEEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTCCHHHHHHHHHHHHHHHTCC--CTTBCCEEE
T ss_pred             hhccCCHHHcEEeEEEeeCCCeEEEEEEECCCccCCCCeEEEEEEEChhcChHHHHHHHHHHHHHHhcC--CCCccccee
Confidence            356667788999999999999999999853      35689999997553 334567999999999999  999999999


Q ss_pred             ceecCCCcccchhhhhhhhhhhhhhhhcccceeeeee--------ecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhcc
Q 039630          100 GCIDGPSRILAPLQASIEALFLFTKLWKMDKFISIYV--------VSGSKKNRVKFNWIARREIALGIARGLAYIHEEI  170 (174)
Q Consensus       100 ~~~~~~~~~lv~~~~~~~~~~l~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  170 (174)
                      ++...+..++++  ++.+++.+...+...........        ..........+++..++.++.|++.||+|||++.
T Consensus        84 ~~~~~~~~~~v~--e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~ylH~~~  160 (301)
T d1lufa_          84 VCAVGKPMCLLF--EYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSERK  160 (301)
T ss_dssp             EECSSSSCEEEE--ECCTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             eeccCCceEEEE--EecCCCcHHHHHHhcCccccccccccccchhhhccccCCCCCCHHHHHHHHHHHHHHhhhcccCC
Confidence            999999988888  77777776664433221111000        0001112235889999999999999999999854

>d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Mycobacterial protein kinase PknB, catalytic domain
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=99.81  E-value=3.1e-20  Score=131.07  Aligned_cols=117  Identities=18%  Similarity=0.204  Sum_probs=94.4

Q ss_pred             cCCeeecceecccCCeeEEEEE-EcCCCEEEEEEeeccCc---cchhHHHHHHHHHhcccccCCCeeeeecceecCCC--
Q 039630           33 TNGFRTSNKIGEGGFGSVYKGR-LEDGTVVAVNVLSVESK---QGETEFMSEVASMANINICHENLVKLHGGCIDGPS--  106 (174)
Q Consensus        33 ~~~~~~~~~lg~G~~g~V~~~~-~~~~~~~avK~~~~~~~---~~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~~~~~--  106 (174)
                      .++|++.+.||+|+||.||+|. ..+++.||+|+++....   .....+.+|+.+++.++  ||||+++++++...+.  
T Consensus         6 ~drY~i~~~lG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~~l~~~~--hpniv~~~~~~~~~~~~~   83 (277)
T d1o6ya_           6 SDRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALN--HPAIVAVYDTGEAETPAG   83 (277)
T ss_dssp             TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSTTTTCHHHHHHHHHHHHHHHTCC--CTTBCCEEEEEEEECSSS
T ss_pred             cceeEEeEEEeeCCCeEEEEEEECCCCCEEEEEEEchhhccCHHHHHHHHHHHHHHHhcC--CCCCCcccceeeeccCCC
Confidence            3569999999999999999999 56899999999976532   23456899999999999  9999999999977654  


Q ss_pred             --cccchhhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhc
Q 039630          107 --RILAPLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEE  169 (174)
Q Consensus       107 --~~lv~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~  169 (174)
                        .++|+  ++.+++.+.....                ....+++..++.++.|++.||+|||++
T Consensus        84 ~~~~lvm--E~~~g~~L~~~~~----------------~~~~l~~~~~~~i~~qi~~al~~lH~~  130 (277)
T d1o6ya_          84 PLPYIVM--EYVDGVTLRDIVH----------------TEGPMTPKRAIEVIADACQALNFSHQN  130 (277)
T ss_dssp             EEEEEEE--ECCCEEEHHHHHH----------------HHCSCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             ceEEEEE--ECCCCCEehhhhc----------------ccCCCCHHHHHHHHHHHHHHHHHHHhC
Confidence              55666  6666666654331                223588999999999999999999975

>d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fl cytokine receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.80  E-value=1.1e-19  Score=131.02  Aligned_cols=138  Identities=20%  Similarity=0.231  Sum_probs=99.0

Q ss_pred             hHHhhcCCeeecceecccCCeeEEEEEEc-CC-----CEEEEEEeecc-CccchhHHHHHHHHHhcc-cccCCCeeeeec
Q 039630           28 ELKIATNGFRTSNKIGEGGFGSVYKGRLE-DG-----TVVAVNVLSVE-SKQGETEFMSEVASMANI-NICHENLVKLHG   99 (174)
Q Consensus        28 ~~~~~~~~~~~~~~lg~G~~g~V~~~~~~-~~-----~~~avK~~~~~-~~~~~~~~~~e~~~l~~l-~~~h~~i~~~~~   99 (174)
                      .|++..++|++.+.||+|+||.||+|... .+     ..||+|.+... .......+.+|+.++.++ +  ||||+++++
T Consensus        31 kwei~~~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~--HpnIv~l~~  108 (325)
T d1rjba_          31 KWEFPRENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGS--HENIVNLLG  108 (325)
T ss_dssp             GGBCCGGGEEEEEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC------CHHHHHHHHHHHHHCC--CTTBCCEEE
T ss_pred             cccCCHHHeEEeeEEeeCCCeEEEEEEEcCCCcccceeEEEEEEeccccCHHHHHHHHHHHHHHHHhcC--CCcEeEEEE
Confidence            46677789999999999999999999843 22     36899998654 334456789999999988 6  999999999


Q ss_pred             ceecCCCcccchhhhhhhhhhhhhhhhcccceeeee-------eecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhc
Q 039630          100 GCIDGPSRILAPLQASIEALFLFTKLWKMDKFISIY-------VVSGSKKNRVKFNWIARREIALGIARGLAYIHEE  169 (174)
Q Consensus       100 ~~~~~~~~~lv~~~~~~~~~~l~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~  169 (174)
                      ++...+..++|+  ++.+++.|...+..........       ...........+++..++.++.||+.||+|||++
T Consensus       109 ~~~~~~~~~lv~--Ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~  183 (325)
T d1rjba_         109 ACTLSGPIYLIF--EYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFK  183 (325)
T ss_dssp             EECSSSSCEEEE--ECCTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             EEeeCCeEEEEE--EcCCCCcHHHHHHhccCCCcchhhhhccccccccccccCCCCHHHHHHHHHHHHHHHHHHHhC
Confidence            999999999999  8888888877553321110000       0000011223588999999999999999999875

>d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Insulin-like growth factor 1 receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.80  E-value=3e-20  Score=132.98  Aligned_cols=135  Identities=22%  Similarity=0.323  Sum_probs=103.6

Q ss_pred             hhhHHhhcCCeeecceecccCCeeEEEEEEc------CCCEEEEEEeeccC-ccchhHHHHHHHHHhcccccCCCeeeee
Q 039630           26 YNELKIATNGFRTSNKIGEGGFGSVYKGRLE------DGTVVAVNVLSVES-KQGETEFMSEVASMANINICHENLVKLH   98 (174)
Q Consensus        26 ~~~~~~~~~~~~~~~~lg~G~~g~V~~~~~~------~~~~~avK~~~~~~-~~~~~~~~~e~~~l~~l~~~h~~i~~~~   98 (174)
                      .++|++..++|.+.+.||+|+||.||+|...      ++..||||.++... ......+.+|+.++++++  |+||++++
T Consensus        12 ~~~~ei~~~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~VAvK~~~~~~~~~~~~~~~~E~~il~~l~--h~nIv~~~   89 (308)
T d1p4oa_          12 PDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFN--CHHVVRLL   89 (308)
T ss_dssp             CCTTBCCGGGEEEEEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTSCHHHHHHHHHHHHHGGGCC--CTTBCCEE
T ss_pred             ccceeecHHHeEEeeEEeeCCCeEEEEEEECCcccCCCCcEEEEEEECcccChHHHHHHHHHHHHHHHcC--CCCEeeee
Confidence            3568788889999999999999999999842      35789999997542 334456899999999999  99999999


Q ss_pred             cceecCCCcccchhhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhcc
Q 039630           99 GGCIDGPSRILAPLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEI  170 (174)
Q Consensus        99 ~~~~~~~~~~lv~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  170 (174)
                      +.+...+..++++  ++..++.+...+........      .......+++..+..++.|+|.||.|||++.
T Consensus        90 ~~~~~~~~~~lv~--e~~~~g~l~~~~~~~~~~~~------~~~~~~~~~~~~~~~i~~~ia~gl~~LH~~~  153 (308)
T d1p4oa_          90 GVVSQGQPTLVIM--ELMTRGDLKSYLRSLRPAMA------NNPVLAPPSLSKMIQMAGEIADGMAYLNANK  153 (308)
T ss_dssp             EEECSSSSCEEEE--ECCTTCBHHHHHHHHHHHHH------HCTTCCCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             eEEecCCceeEEE--eecCCCCHHHHHHhcccccc------cccccCCCCHHHHHHHHHHHHHHHHHHhhCC
Confidence            9999999999998  77777766554432111000      0111224688899999999999999999863

>d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase SYK
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.80  E-value=5.7e-20  Score=129.64  Aligned_cols=109  Identities=25%  Similarity=0.336  Sum_probs=86.1

Q ss_pred             ceecccCCeeEEEEEEc---CCCEEEEEEeecc--CccchhHHHHHHHHHhcccccCCCeeeeecceecCCCcccchhhh
Q 039630           40 NKIGEGGFGSVYKGRLE---DGTVVAVNVLSVE--SKQGETEFMSEVASMANINICHENLVKLHGGCIDGPSRILAPLQA  114 (174)
Q Consensus        40 ~~lg~G~~g~V~~~~~~---~~~~~avK~~~~~--~~~~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~~~~~~~lv~~~~  114 (174)
                      +.||+|+||.||+|.++   .++.||||+++..  .....+.+.+|+.++++++  ||||+++++++.. +..++|+  |
T Consensus        13 k~iG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~E~~il~~l~--HpnIv~~~g~~~~-~~~~lvm--E   87 (277)
T d1xbba_          13 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLD--NPYIVRMIGICEA-ESWMLVM--E   87 (277)
T ss_dssp             EEEEECSSEEEEEEEEECSSSEEEEEEEEEC-----CHHHHHHHHHHHHHHTCC--CTTBCCEEEEEES-SSEEEEE--E
T ss_pred             CCcccCCCeEEEEEEEccCCcCeEEEEEEEChhhCCHHHHHHHHHHHHHHHhCC--CCCCceEEEEecc-CCEEEEE--E
Confidence            46999999999999853   3468999999754  2334567999999999999  9999999999865 4567777  7


Q ss_pred             hhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhc
Q 039630          115 SIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEE  169 (174)
Q Consensus       115 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~  169 (174)
                      +.+++.|...+.                ....+++..++.++.||+.||+|||++
T Consensus        88 ~~~~g~L~~~l~----------------~~~~l~~~~~~~i~~qi~~gl~ylH~~  126 (277)
T d1xbba_          88 MAELGPLNKYLQ----------------QNRHVKDKNIIELVHQVSMGMKYLEES  126 (277)
T ss_dssp             CCTTEEHHHHHH----------------HCTTCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             cCCCCcHHHHHh----------------hccCCCHHHHHHHHHHHHHHHhhHHhC
Confidence            777777765331                223588999999999999999999875

>d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fibroblast growth factor receptor 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.80  E-value=7.5e-20  Score=130.38  Aligned_cols=140  Identities=21%  Similarity=0.246  Sum_probs=97.9

Q ss_pred             hHHhhcCCeeecceecccCCeeEEEEEEc-C-------CCEEEEEEeeccC-ccchhHHHHHHHHHhcccccCCCeeeee
Q 039630           28 ELKIATNGFRTSNKIGEGGFGSVYKGRLE-D-------GTVVAVNVLSVES-KQGETEFMSEVASMANINICHENLVKLH   98 (174)
Q Consensus        28 ~~~~~~~~~~~~~~lg~G~~g~V~~~~~~-~-------~~~~avK~~~~~~-~~~~~~~~~e~~~l~~l~~~h~~i~~~~   98 (174)
                      +|.+..++|++++.||+|+||.||+|+.. .       +..||||.++... ......+.+|...+.++. .||||++++
T Consensus         7 ~~~i~~~~~~l~~~iG~G~fg~Vy~~~~~~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~e~~~l~~~~-~HpnIv~~~   85 (299)
T d1fgka_           7 RWELPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIG-KHKNIINLL   85 (299)
T ss_dssp             TTBCCGGGEEEEEECC-----CEEEEEEECC----CCCEEEEEEECCCTTCCHHHHHHHHHHHHHHHHHC-CCTTBCCEE
T ss_pred             cCcccHHHeEEeeEEeecCCcEEEEEEEcCCCcccccCceEEEEEEECcccChHHHHHHHHHHHHHHHhc-CCCeEEecc
Confidence            36677788999999999999999999832 2       2479999997553 234567888988888873 399999999


Q ss_pred             cceecCCCcccchhhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhcc
Q 039630           99 GGCIDGPSRILAPLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEI  170 (174)
Q Consensus        99 ~~~~~~~~~~lv~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  170 (174)
                      +++.+.+..++++  ++.+++.+...+.....................+++..++.++.|++.||.|||++.
T Consensus        86 ~~~~~~~~~~~v~--e~~~~g~l~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~ylH~~~  155 (299)
T d1fgka_          86 GACTQDGPLYVIV--EYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKK  155 (299)
T ss_dssp             EEECSSSSCEEEE--CCCTTCBHHHHHHTTSCC------------CCCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             cccccCCeEEEEE--EccCCCcHHHHHHhhcCCccccccccccCccccCCHHHHHHHHHHHHHHHHHhhhCC
Confidence            9999999888888  888888887765443322111111111223346899999999999999999999854

>d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase C, theta type
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.80  E-value=7.2e-20  Score=131.56  Aligned_cols=117  Identities=17%  Similarity=0.216  Sum_probs=95.6

Q ss_pred             CCeeecceecccCCeeEEEEE-EcCCCEEEEEEeecc---CccchhHHHHHHHHHh-cccccCCCeeeeecceecCCCcc
Q 039630           34 NGFRTSNKIGEGGFGSVYKGR-LEDGTVVAVNVLSVE---SKQGETEFMSEVASMA-NINICHENLVKLHGGCIDGPSRI  108 (174)
Q Consensus        34 ~~~~~~~~lg~G~~g~V~~~~-~~~~~~~avK~~~~~---~~~~~~~~~~e~~~l~-~l~~~h~~i~~~~~~~~~~~~~~  108 (174)
                      ++|.+++.||+|+||.||+|. ..+++.||+|+++..   .......+..|..++. .++  ||||+++++++.+.+..+
T Consensus         2 ddy~i~~~iG~G~fg~Vy~~~~~~t~~~vAvK~i~k~~~~~~~~~~~~~~e~~~l~~~~~--hp~Iv~~~~~~~~~~~~y   79 (320)
T d1xjda_           2 EDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWE--HPFLTHMFCTFQTKENLF   79 (320)
T ss_dssp             TTEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHTT--CTTBCCEEEEEECSSEEE
T ss_pred             CCeEEeeEEecCCCcEEEEEEECCCCCEEEEEEEchhhccChHHHHHHHHHHHHHHHhCC--CCcEEEEEEEEccCCcee
Confidence            479999999999999999999 567999999999754   2334556677777665 578  999999999999999999


Q ss_pred             cchhhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhcc
Q 039630          109 LAPLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEI  170 (174)
Q Consensus       109 lv~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  170 (174)
                      +|+  ++.+++.+...+.                ....+++..+..++.||+.||+|||++.
T Consensus        80 ivm--Ey~~~g~L~~~i~----------------~~~~~~e~~~~~~~~qi~~al~ylH~~~  123 (320)
T d1xjda_          80 FVM--EYLNGGDLMYHIQ----------------SCHKFDLSRATFYAAEIILGLQFLHSKG  123 (320)
T ss_dssp             EEE--ECCTTCBHHHHHH----------------HHSSCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             EEE--eecCCCcHHHHhh----------------ccCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            998  7877777776442                2234788999999999999999999864

>d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.80  E-value=6.8e-20  Score=133.15  Aligned_cols=116  Identities=22%  Similarity=0.263  Sum_probs=97.2

Q ss_pred             CCeeecceecccCCeeEEEEE-EcCCCEEEEEEeecc---CccchhHHHHHHHHHhcccccCCCeeeeecceecCCCccc
Q 039630           34 NGFRTSNKIGEGGFGSVYKGR-LEDGTVVAVNVLSVE---SKQGETEFMSEVASMANINICHENLVKLHGGCIDGPSRIL  109 (174)
Q Consensus        34 ~~~~~~~~lg~G~~g~V~~~~-~~~~~~~avK~~~~~---~~~~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~~~~~~~l  109 (174)
                      ++|++++.||+|+||.||+|. ..+|+.||+|+++..   .......+.+|+.+++.++  ||||+++++++......++
T Consensus        41 d~y~i~~~lG~G~fg~Vy~a~~~~~g~~~AvK~i~~~~~~~~~~~~~~~~E~~il~~l~--hpnIv~~~~~~~~~~~~~~  118 (350)
T d1rdqe_          41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN--FPFLVKLEFSFKDNSNLYM  118 (350)
T ss_dssp             GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCC--CTTBCCEEEEEECSSEEEE
T ss_pred             cCeEEEEEeecCcCcEEEEEEECCCCCEEEEEEEchHHccCHHHHHHHHHHHHHHHHcC--CCcEeeccccccccccccc
Confidence            469999999999999999999 567999999999744   2344567899999999999  9999999999999988888


Q ss_pred             chhhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhc
Q 039630          110 APLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEE  169 (174)
Q Consensus       110 v~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~  169 (174)
                      ++  ++..++.+...+.                ....+++..+..++.||+.||.|||++
T Consensus       119 v~--e~~~~g~l~~~l~----------------~~~~l~e~~~~~i~~qi~~aL~yLH~~  160 (350)
T d1rdqe_         119 VM--EYVAGGEMFSHLR----------------RIGRFSEPHARFYAAQIVLTFEYLHSL  160 (350)
T ss_dssp             EE--ECCTTCBHHHHHH----------------HHCCCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             cc--ccccccchhhhHh----------------hcCCCCHHHHHHHHHHHHHHHHHHHhC
Confidence            88  7777777665442                123578999999999999999999875

>d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: EGF receptor tyrosine kinase, Erbb-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.80  E-value=1.8e-19  Score=129.42  Aligned_cols=117  Identities=23%  Similarity=0.409  Sum_probs=88.1

Q ss_pred             CCeeecceecccCCeeEEEEEE-cCCC----EEEEEEeecc-CccchhHHHHHHHHHhcccccCCCeeeeecceecCCCc
Q 039630           34 NGFRTSNKIGEGGFGSVYKGRL-EDGT----VVAVNVLSVE-SKQGETEFMSEVASMANINICHENLVKLHGGCIDGPSR  107 (174)
Q Consensus        34 ~~~~~~~~lg~G~~g~V~~~~~-~~~~----~~avK~~~~~-~~~~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~~~~~~  107 (174)
                      .+|+.++.||+|+||.||+|.. .+|+    .||+|.++.. .....+.+.+|+.++++++  ||||++++|++.+.+ .
T Consensus         9 ~dy~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~--HpnIv~l~g~~~~~~-~   85 (317)
T d1xkka_           9 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD--NPHVCRLLGICLTST-V   85 (317)
T ss_dssp             TTEEEEEEEEECSSEEEEEEEECC----CCEEEEEEEECC----CTHHHHHHHHHHHHHCC--CTTBCCEEEEEESSS-E
T ss_pred             HHCEEeeEEecCCCeEEEEEEEcCCCCEEEEEEEEEEeccccCHHHHHHHHHHHHHHHhCC--CCCEeeEEEEEecCC-e
Confidence            4699999999999999999984 4444    6888888644 3445678999999999999  999999999998754 4


Q ss_pred             ccchhhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhcc
Q 039630          108 ILAPLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEI  170 (174)
Q Consensus       108 ~lv~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  170 (174)
                      ++++  ++...+.+...+.               .....+++..++.++.|||.||+|||++.
T Consensus        86 ~~v~--e~~~~~~l~~~~~---------------~~~~~~~~~~~~~i~~qi~~gl~yLH~~~  131 (317)
T d1xkka_          86 QLIT--QLMPFGCLLDYVR---------------EHKDNIGSQYLLNWCVQIAKGMNYLEDRR  131 (317)
T ss_dssp             EEEE--ECCTTCBHHHHHH---------------HTSSSCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             eEEE--EeccCCccccccc---------------ccccCCCHHHHHHHHHHHHHHHHHHHHcC
Confidence            4555  4555555544331               12335789999999999999999999864

>d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-KIT receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.79  E-value=1.9e-19  Score=128.95  Aligned_cols=141  Identities=18%  Similarity=0.266  Sum_probs=103.6

Q ss_pred             hHHhhcCCeeecceecccCCeeEEEEEE------cCCCEEEEEEeeccC-ccchhHHHHHHHHHhcccccCCCeeeeecc
Q 039630           28 ELKIATNGFRTSNKIGEGGFGSVYKGRL------EDGTVVAVNVLSVES-KQGETEFMSEVASMANINICHENLVKLHGG  100 (174)
Q Consensus        28 ~~~~~~~~~~~~~~lg~G~~g~V~~~~~------~~~~~~avK~~~~~~-~~~~~~~~~e~~~l~~l~~~h~~i~~~~~~  100 (174)
                      +|.+..++|++.+.||+|+||.||+|.+      .+++.||||.++... ......+.+|+.++..+. .||||++++++
T Consensus        17 ~~~~~~~~~~l~~~iG~G~fg~Vy~a~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~E~~~~~~l~-~HpnIv~~~g~   95 (311)
T d1t46a_          17 KWEFPRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLG-NHMNIVNLLGA   95 (311)
T ss_dssp             GGBCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHC-CCTTBCCEEEE
T ss_pred             cccCCHHHeEEeeEEeecCCeEEEEEEEeccccCCCCeEEEEEEECcccCHHHHHHHHHHHHHHHhcc-CCCCEEEEEEE
Confidence            5777778999999999999999999984      235689999997553 334557889999999983 39999999999


Q ss_pred             eecCCCcccchhhhhhhhhhhhhhhhcccceeeeee--ecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhccC
Q 039630          101 CIDGPSRILAPLQASIEALFLFTKLWKMDKFISIYV--VSGSKKNRVKFNWIARREIALGIARGLAYIHEEIK  171 (174)
Q Consensus       101 ~~~~~~~~lv~~~~~~~~~~l~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~~  171 (174)
                      +...+..++++  ++.+++.+...+...........  ..........+++..+..++.||+.||+|||++.-
T Consensus        96 ~~~~~~~~lvm--E~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~gl~~LH~~~i  166 (311)
T d1t46a_          96 CTIGGPTLVIT--EYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKNC  166 (311)
T ss_dssp             ECSSSSCEEEE--ECCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred             EeeCCEEEEEE--EcCCCCCHHHHHHhccccccccccccccccccccCCCHHHHHHHHHHHHHHHHHHHhCCe
Confidence            99999889988  77777776665433221111000  00011123458899999999999999999998753

>d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tie2 kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.79  E-value=6.2e-20  Score=131.39  Aligned_cols=132  Identities=24%  Similarity=0.354  Sum_probs=95.9

Q ss_pred             CCeeecceecccCCeeEEEEEE-cCCC--EEEEEEeecc-CccchhHHHHHHHHHhcc-cccCCCeeeeecceecCCCcc
Q 039630           34 NGFRTSNKIGEGGFGSVYKGRL-EDGT--VVAVNVLSVE-SKQGETEFMSEVASMANI-NICHENLVKLHGGCIDGPSRI  108 (174)
Q Consensus        34 ~~~~~~~~lg~G~~g~V~~~~~-~~~~--~~avK~~~~~-~~~~~~~~~~e~~~l~~l-~~~h~~i~~~~~~~~~~~~~~  108 (174)
                      ++|++.++||+|+||.||+|.. .++.  .||||.++.. .....+.+.+|+.++.++ +  ||||+++++++...+..+
T Consensus        10 ~~~~~~~~iG~G~fg~Vy~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~~--HpnIv~~~~~~~~~~~~~   87 (309)
T d1fvra_          10 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGH--HPNIINLLGACEHRGYLY   87 (309)
T ss_dssp             GGCEEEEEEECGGGCEEEEEEEEETTEEEEEEEEEEECC------CHHHHHHHHHTTCCC--CTTBCCEEEEEEETTEEE
T ss_pred             HHcEEEEEEeeCCCcEEEEEEECCCCeEEEEEEEEECcccChHHHHHHHHHHHHHHhccC--CCCEeeEEEEEecCCeeE
Confidence            5678889999999999999994 4444  5778887644 344566799999999998 6  999999999999999999


Q ss_pred             cchhhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhc
Q 039630          109 LAPLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEE  169 (174)
Q Consensus       109 lv~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~  169 (174)
                      +|+  ++.+++.+...+.....................+++..+..++.||+.||.|||++
T Consensus        88 iV~--ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~~lH~~  146 (309)
T d1fvra_          88 LAI--EYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQK  146 (309)
T ss_dssp             EEE--CCCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             EEE--EecCCCcHHHHHhhccccccchhhhccccccCCCCHHHHHHHHHHHHHHHHhhhcC
Confidence            998  88888887775533211100000000012334689999999999999999999985

>d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK5
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.79  E-value=2.8e-19  Score=126.82  Aligned_cols=116  Identities=18%  Similarity=0.298  Sum_probs=95.5

Q ss_pred             CCeeecceecccCCeeEEEEE-EcCCCEEEEEEeeccC--ccchhHHHHHHHHHhcccccCCCeeeeecceecCCCcccc
Q 039630           34 NGFRTSNKIGEGGFGSVYKGR-LEDGTVVAVNVLSVES--KQGETEFMSEVASMANINICHENLVKLHGGCIDGPSRILA  110 (174)
Q Consensus        34 ~~~~~~~~lg~G~~g~V~~~~-~~~~~~~avK~~~~~~--~~~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~~~~~~~lv  110 (174)
                      ++|++++.||+|+||.||+|. ..+++.||||+++...  ......+.+|+.+++.++  |+||+++++++...+..+++
T Consensus         2 ~ry~~i~~LG~G~fg~V~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~--h~niv~~~~~~~~~~~~~iv   79 (292)
T d1unla_           2 QKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELK--HKNIVRLHDVLHSDKKLTLV   79 (292)
T ss_dssp             CSEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEESSCSSTTHHHHHHHHHHHHTTCC--CTTBCCEEEEEECSSEEEEE
T ss_pred             CCCEeeeEEecCcCeEEEEEEECCCCcEEEEEEEehhhCChHHHHHHHHHHHHHHhcC--cCCEEeeccccccccceeEE
Confidence            469999999999999999999 5678999999997553  234667899999999999  99999999999999988888


Q ss_pred             hhhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhc
Q 039630          111 PLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEE  169 (174)
Q Consensus       111 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~  169 (174)
                      +  ++..++.+....                .....+++..+..++.|++.||+|||++
T Consensus        80 ~--~~~~~~~l~~~~----------------~~~~~~~~~~~~~~~~q~~~aL~~lH~~  120 (292)
T d1unla_          80 F--EFCDQDLKKYFD----------------SCNGDLDPEIVKSFLFQLLKGLGFCHSR  120 (292)
T ss_dssp             E--ECCSEEHHHHHH----------------HTTTCCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             e--eecccccccccc----------------ccccccchhHHHHHHHHHHHHHHHhhcC
Confidence            7  555555544422                1233578889999999999999999985

>d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Activated CDC42 kinase 1, ACK1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.79  E-value=8.9e-20  Score=128.40  Aligned_cols=118  Identities=26%  Similarity=0.472  Sum_probs=85.0

Q ss_pred             cCCeeecceecccCCeeEEEEEEc--CC--CEEEEEEeecc---CccchhHHHHHHHHHhcccccCCCeeeeecceecCC
Q 039630           33 TNGFRTSNKIGEGGFGSVYKGRLE--DG--TVVAVNVLSVE---SKQGETEFMSEVASMANINICHENLVKLHGGCIDGP  105 (174)
Q Consensus        33 ~~~~~~~~~lg~G~~g~V~~~~~~--~~--~~~avK~~~~~---~~~~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~~~~  105 (174)
                      .++|++++.||+|+||.||+|+..  ++  ..||||+++..   .....+.+.+|+.+++.++  ||||++++|++.+ +
T Consensus         7 ~~d~~~~~~iG~G~fg~Vy~~~~~~~~~~~~~vAiK~l~~~~~~~~~~~~~~~~Ei~~l~~l~--H~nIv~~~g~~~~-~   83 (273)
T d1u46a_           7 EKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLD--HRNLIRLYGVVLT-P   83 (273)
T ss_dssp             GGGEEEEEECC----CCCEEEEEECTTSCEEEEEEEC--------CHHHHHHHHHHHHHHHCC--CTTBCCEEEEECS-S
T ss_pred             hHHeEEEEEEecCCCeEEEEEEEECCCCcEEEEEEEEEChhhcCCHHHHHHHHHHHHHHHhCC--CCCEEEEEEEEee-c
Confidence            356999999999999999999843  22  37899998754   2333567999999999999  9999999999965 4


Q ss_pred             CcccchhhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhcc
Q 039630          106 SRILAPLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEI  170 (174)
Q Consensus       106 ~~~lv~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  170 (174)
                      ..++++  ++.+.+.+...+.               .....+++..++.++.|+|.||.|||++.
T Consensus        84 ~~~lv~--e~~~~~~l~~~~~---------------~~~~~l~~~~~~~~~~qi~~gl~ylH~~~  131 (273)
T d1u46a_          84 PMKMVT--ELAPLGSLLDRLR---------------KHQGHFLLGTLSRYAVQVAEGMGYLESKR  131 (273)
T ss_dssp             SCEEEE--ECCTTCBHHHHHH---------------HHGGGSCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             chheee--eeecCcchhhhhh---------------cccCCCCHHHHHHHHHHHHHHHHHhhhCC
Confidence            556776  6666666554331               12235889999999999999999999853

>d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 7, CDK7
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.79  E-value=1.4e-19  Score=128.97  Aligned_cols=113  Identities=19%  Similarity=0.284  Sum_probs=88.4

Q ss_pred             ecceecccCCeeEEEEE-EcCCCEEEEEEeeccCc-----cchhHHHHHHHHHhcccccCCCeeeeecceecCCCcccch
Q 039630           38 TSNKIGEGGFGSVYKGR-LEDGTVVAVNVLSVESK-----QGETEFMSEVASMANINICHENLVKLHGGCIDGPSRILAP  111 (174)
Q Consensus        38 ~~~~lg~G~~g~V~~~~-~~~~~~~avK~~~~~~~-----~~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~~~~~~~lv~  111 (174)
                      .+++||+|+||.||+|. ..+|+.||||+++....     .....+.+|+.+++.++  ||||+++++++...+..++|+
T Consensus         2 ~l~~lG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~Ei~il~~l~--hpnIv~~~~~~~~~~~~~ivm   79 (299)
T d1ua2a_           2 KLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELS--HPNIIGLLDAFGHKSNISLVF   79 (299)
T ss_dssp             EEEEEEEETTEEEEEEECSSCCSEEEEEEC------------CTHHHHHHHHHHHCC--CTTBCCEEEEECCTTCCEEEE
T ss_pred             cceEeccCcCeEEEEEEECCCCcEEEEEEEehhhhhhhhHHHHHHHHHHHHHHHhCC--CCCEeEEEeeeccCCceeehh
Confidence            45789999999999999 56799999999975421     12356889999999999  999999999999999999988


Q ss_pred             hhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhcc
Q 039630          112 LQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEI  170 (174)
Q Consensus       112 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  170 (174)
                        ++..++.+....                .....+++..+..++.||+.||+|||++.
T Consensus        80 --E~~~~~~~~~~~----------------~~~~~l~~~~~~~~~~qil~aL~~lH~~~  120 (299)
T d1ua2a_          80 --DFMETDLEVIIK----------------DNSLVLTPSHIKAYMLMTLQGLEYLHQHW  120 (299)
T ss_dssp             --ECCSEEHHHHHT----------------TCCSSCCSSHHHHHHHHHHHHHHHHHHTT
T ss_pred             --hhhcchHHhhhh----------------hcccCCCHHHHHHHHHHHHHHHHHhhccc
Confidence              666555444311                22345788888999999999999999864

>d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Proto-oncogene serine/threonine-protein kinase Pim-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.77  E-value=9.9e-20  Score=128.20  Aligned_cols=119  Identities=20%  Similarity=0.247  Sum_probs=92.6

Q ss_pred             CCeeecceecccCCeeEEEEE-EcCCCEEEEEEeeccCc------cchhHHHHHHHHHhcccccCCCeeeeecceecCCC
Q 039630           34 NGFRTSNKIGEGGFGSVYKGR-LEDGTVVAVNVLSVESK------QGETEFMSEVASMANINICHENLVKLHGGCIDGPS  106 (174)
Q Consensus        34 ~~~~~~~~lg~G~~g~V~~~~-~~~~~~~avK~~~~~~~------~~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~~~~~  106 (174)
                      ++|++.+.||+|+||.||+|. ..+|+.||+|+++....      .....+.+|+.++++++..||||+++++++.+.+.
T Consensus         4 ~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~~~h~nIv~~~~~~~~~~~   83 (273)
T d1xwsa_           4 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDS   83 (273)
T ss_dssp             TTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSSSCSBCCEEEEEECSSE
T ss_pred             CeEEEeEEEeeCCCeEEEEEEECCCCCEEEEEEEehHHccchhhhhHHHHHHHHHHHHHHhccCCCCccEEEEEEeeCCe
Confidence            569999999999999999999 56799999999975421      12234678999999886458999999999999998


Q ss_pred             cccchhhhhhhhh-hhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhcc
Q 039630          107 RILAPLQASIEAL-FLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEI  170 (174)
Q Consensus       107 ~~lv~~~~~~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  170 (174)
                      .++++  ++.... .+...+                .....+++..+..++.|++.||+|||++.
T Consensus        84 ~~lv~--e~~~~~~~l~~~~----------------~~~~~l~e~~~~~~~~qi~~al~~lH~~~  130 (273)
T d1xwsa_          84 FVLIL--ERPEPVQDLFDFI----------------TERGALQEELARSFFWQVLEAVRHCHNCG  130 (273)
T ss_dssp             EEEEE--ECCSSEEEHHHHH----------------HHHCSCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             EEEEE--EeccCcchHHHHH----------------hccCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            88888  554432 222211                12235889999999999999999999853

>d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase CK2, alpha subunit
species: Rattus norvegicus [TaxId: 10116]

Probab=99.77  E-value=7.2e-19  Score=126.73  Aligned_cols=111  Identities=16%  Similarity=0.234  Sum_probs=88.6

Q ss_pred             CCeeecceecccCCeeEEEEE-EcCCCEEEEEEeeccCccchhHHHHHHHHHhcccccCCCeeeeecceecCC--Ccccc
Q 039630           34 NGFRTSNKIGEGGFGSVYKGR-LEDGTVVAVNVLSVESKQGETEFMSEVASMANINICHENLVKLHGGCIDGP--SRILA  110 (174)
Q Consensus        34 ~~~~~~~~lg~G~~g~V~~~~-~~~~~~~avK~~~~~~~~~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~~~~--~~~lv  110 (174)
                      ++|++++.||+|+||.||+|+ ..+++.||+|+++.   ...+.+.+|+.+|..+. .||||+++++.+....  ..+++
T Consensus        35 d~y~i~~~LG~G~fg~V~~a~~~~~~~~vAiK~i~~---~~~~~~~~Ei~il~~l~-~hpnIv~~~~~~~~~~~~~~~~v  110 (328)
T d3bqca1          35 DDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKP---VKKKKIKREIKILENLR-GGPNIITLADIVKDPVSRTPALV  110 (328)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECS---SCHHHHHHHHHHHHHHT-TSTTBCCEEEEEECTTTCSEEEE
T ss_pred             cCeEEEEEEecCcCeEEEEEEECCCCCEEEEEEECH---HHHHHHHHHHHHHHhcc-CCCCCcEEEEEEEecCCCceeEE
Confidence            569999999999999999999 57799999999973   34567889999999984 4999999999987553  34555


Q ss_pred             hhhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhc
Q 039630          111 PLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEE  169 (174)
Q Consensus       111 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~  169 (174)
                      +  ++...+.+...                   ...+++..+..++.||+.||+|||++
T Consensus       111 ~--e~~~~~~L~~~-------------------~~~l~e~~i~~i~~qil~aL~~LH~~  148 (328)
T d3bqca1         111 F--EHVNNTDFKQL-------------------YQTLTDYDIRFYMYEILKALDYCHSM  148 (328)
T ss_dssp             E--ECCCSCBGGGT-------------------TTSCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             E--eecCCCcHHHH-------------------hcCCCHHHHHHHHHHHHHHHHHHhhc
Confidence            5  55555544321                   12478999999999999999999875

>d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: G-protein coupled receptor kinase 2
species: Cow (Bos taurus) [TaxId: 9913]

Probab=99.76  E-value=4.6e-19  Score=129.39  Aligned_cols=117  Identities=26%  Similarity=0.287  Sum_probs=92.6

Q ss_pred             CCeeecceecccCCeeEEEEE-EcCCCEEEEEEeeccC---ccchhHHHHH---HHHHhcccccCCCeeeeecceecCCC
Q 039630           34 NGFRTSNKIGEGGFGSVYKGR-LEDGTVVAVNVLSVES---KQGETEFMSE---VASMANINICHENLVKLHGGCIDGPS  106 (174)
Q Consensus        34 ~~~~~~~~lg~G~~g~V~~~~-~~~~~~~avK~~~~~~---~~~~~~~~~e---~~~l~~l~~~h~~i~~~~~~~~~~~~  106 (174)
                      ++|++++.||+|+||.||+|. ..+|+.||+|++....   ......+.+|   +.+++.++  ||||+++++++...+.
T Consensus         4 ddy~i~~~lG~G~fg~Vy~~~~~~t~~~vAiK~i~~~~~~~~~~~~~~~~e~~~~~~l~~~~--hpnIv~l~~~~~~~~~   81 (364)
T d1omwa3           4 NDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGD--CPFIVCMSYAFHTPDK   81 (364)
T ss_dssp             TTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHHTCHHHHHHHHHHHHHHSSSC--CTTBCCEEEEEECSSE
T ss_pred             HhCeeeeEEecCCCeEEEEEEECCCCCEEEEEEEchHHcchhhHHHHHHHHHHHHHHHhcCC--CCcEEEEEEEEEECCE
Confidence            579999999999999999999 5679999999996431   1222333444   66777778  9999999999999998


Q ss_pred             cccchhhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhcc
Q 039630          107 RILAPLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEI  170 (174)
Q Consensus       107 ~~lv~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  170 (174)
                      .++|+  ++.+++.|...+.                ....+++..+..++.||+.||.|||++.
T Consensus        82 ~~ivm--E~~~gg~L~~~l~----------------~~~~~~e~~~~~~~~qi~~aL~ylH~~~  127 (364)
T d1omwa3          82 LSFIL--DLMNGGDLHYHLS----------------QHGVFSEADMRFYAAEIILGLEHMHNRF  127 (364)
T ss_dssp             EEEEE--CCCCSCBHHHHHH----------------HHCSCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             EEEEE--EecCCCcHHHHHH----------------hcccccHHHHHHHHHHHHHHHHHHHHCC
Confidence            88888  7777777765432                2234788899999999999999999864

>d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Vascular endothelial growth factor receptor 2 (kdr)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.76  E-value=1.2e-18  Score=123.98  Aligned_cols=144  Identities=18%  Similarity=0.230  Sum_probs=97.4

Q ss_pred             echhhHHhhcCCeeecceecccCCeeEEEEEEc------CCCEEEEEEeeccC-ccchhHHHHHHHHHhcccccCCCeee
Q 039630           24 ISYNELKIATNGFRTSNKIGEGGFGSVYKGRLE------DGTVVAVNVLSVES-KQGETEFMSEVASMANINICHENLVK   96 (174)
Q Consensus        24 ~~~~~~~~~~~~~~~~~~lg~G~~g~V~~~~~~------~~~~~avK~~~~~~-~~~~~~~~~e~~~l~~l~~~h~~i~~   96 (174)
                      +...+|.+..++|++.+.||+|+||.||+|...      +++.||||.++... ......+..|..++.++. .|+||+.
T Consensus         3 ~~~~~wei~~~~y~~~~~iG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~e~~~l~~~~-~h~~iv~   81 (299)
T d1ywna1           3 YDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIG-HHLNVVN   81 (299)
T ss_dssp             CCHHHHBCCGGGEEEEEEEEECSSCEEEEEEEESTTSSSCEEEEEEEEC----CHHHHHHHHHHHHHHHHHC-CCTTBCC
T ss_pred             CCCccccccHHHEEEeeEEeecCCeEEEEEEEcCCCcccCCeEEEEEEEccccCcHHHHHHHHHHHHHHhhc-CCCeEEE
Confidence            345678788889999999999999999999842      24689999997542 334556778888887764 3899999


Q ss_pred             eecceecCC-CcccchhhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhcc
Q 039630           97 LHGGCIDGP-SRILAPLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEI  170 (174)
Q Consensus        97 ~~~~~~~~~-~~~lv~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  170 (174)
                      +++.+...+ ..++++  ++.+++.+...+........-............+++..++.++.||+.||.|||++.
T Consensus        82 ~~~~~~~~~~~~~iv~--E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~gl~ylH~~~  154 (299)
T d1ywna1          82 LLGACTKPGGPLMVIV--EFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRK  154 (299)
T ss_dssp             EEEEECSTTSCCEEEE--ECCTTCBHHHHHHHTGGGBCC-----------CBCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             eeeeeccCCCeEEEEE--EecCCCcHHHHHHhccccccccccchhhhhcccCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            999886654 466777  777777776654322111000000001112345889999999999999999998753

>d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38-gamma
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.75  E-value=9e-19  Score=127.09  Aligned_cols=116  Identities=21%  Similarity=0.233  Sum_probs=84.1

Q ss_pred             cCCeeecceecccCCeeEEEEE-EcCCCEEEEEEeeccC--ccchhHHHHHHHHHhcccccCCCeeeeecceecCCC---
Q 039630           33 TNGFRTSNKIGEGGFGSVYKGR-LEDGTVVAVNVLSVES--KQGETEFMSEVASMANINICHENLVKLHGGCIDGPS---  106 (174)
Q Consensus        33 ~~~~~~~~~lg~G~~g~V~~~~-~~~~~~~avK~~~~~~--~~~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~~~~~---  106 (174)
                      .+.|++++.||+|+||.||+|. ..+|+.||+|+++...  ......+.+|+.+|+.++  |||++++++++...+.   
T Consensus        17 ~~~Y~~i~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~--hpniv~l~~~~~~~~~~~~   94 (346)
T d1cm8a_          17 RAVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMR--HENVIGLLDVFTPDETLDD   94 (346)
T ss_dssp             BSSEEEEEEC------CEEEEEETTTCCEEEEEECSSTTSSHHHHHHHHHHHHHHHHCC--BTTBCCCSEEECSCSSTTT
T ss_pred             CCcEEEEEEEecCCCeEEEEEEECCCCCEEEEEEEchhhcChHHHHHHHHHHHHHHhcC--CCCeeEEEEEeccCccccc
Confidence            4679999999999999999999 5679999999997542  234567889999999999  9999999999977653   


Q ss_pred             ---cccchhhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhcc
Q 039630          107 ---RILAPLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEI  170 (174)
Q Consensus       107 ---~~lv~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  170 (174)
                         .++++  ++.+. .+ ..+                .....+++..+..++.|++.||.|||++.
T Consensus        95 ~~~~~lv~--e~~~~-~l-~~~----------------~~~~~l~~~~~~~~~~qi~~aL~~LH~~~  141 (346)
T d1cm8a_          95 FTDFYLVM--PFMGT-DL-GKL----------------MKHEKLGEDRIQFLVYQMLKGLRYIHAAG  141 (346)
T ss_dssp             CCCCEEEE--ECCSE-EH-HHH----------------HHHCCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             cceEEEEE--ecccc-cH-HHH----------------HHhccccHHHHHHHHHHHHHHHHHHHhCC
Confidence               45665  43321 11 111                11235899999999999999999999853

>d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.75  E-value=1.1e-18  Score=126.70  Aligned_cols=117  Identities=22%  Similarity=0.243  Sum_probs=90.2

Q ss_pred             cCCeeecceecccCCeeEEEEE-EcCCCEEEEEEeeccC--ccchhHHHHHHHHHhcccccCCCeeeeecceecCCC---
Q 039630           33 TNGFRTSNKIGEGGFGSVYKGR-LEDGTVVAVNVLSVES--KQGETEFMSEVASMANINICHENLVKLHGGCIDGPS---  106 (174)
Q Consensus        33 ~~~~~~~~~lg~G~~g~V~~~~-~~~~~~~avK~~~~~~--~~~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~~~~~---  106 (174)
                      .++|++++.||+|+||.||+|. ..+|+.||||+++...  ......+.+|+.+|+.++  |+|++++++++.....   
T Consensus        17 ~~rY~i~~~LG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~--h~~iv~~~~~~~~~~~~~~   94 (348)
T d2gfsa1          17 PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMK--HENVIGLLDVFTPARSLEE   94 (348)
T ss_dssp             ETTEEEEEECGGGTTSSEEEEEETTTTEEEEEEECSCTTSSHHHHHHHHHHHHHHHHCC--CTTBCCCSEEECSCSSTTT
T ss_pred             CCCeEEEEEEecCCCeEEEEEEECCCCCEEEEEEECchhcChHHHHHHHHHHHHHHhcC--CCCeeeEEEEEeecccccc
Confidence            3579999999999999999999 5679999999997552  234557889999999999  9999999999864422   


Q ss_pred             --cccchhhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhcc
Q 039630          107 --RILAPLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEI  170 (174)
Q Consensus       107 --~~lv~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  170 (174)
                        .++++  ++..++.|...+                 ....+++..+..++.||+.||+|||++.
T Consensus        95 ~~~~~i~--~~~~gg~L~~~~-----------------~~~~l~e~~~~~i~~qil~aL~~LH~~g  141 (348)
T d2gfsa1          95 FNDVYLV--THLMGADLNNIV-----------------KCQKLTDDHVQFLIYQILRGLKYIHSAD  141 (348)
T ss_dssp             CCCCEEE--EECCSEEHHHHH-----------------TTCCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             CceEEEE--EeecCCchhhhc-----------------ccccccHHHHHHHHHHHHHHHHHHHhCC
Confidence              23333  444445544322                 1224899999999999999999999864

>d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase Erk2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.75  E-value=1.2e-18  Score=126.33  Aligned_cols=117  Identities=19%  Similarity=0.201  Sum_probs=86.9

Q ss_pred             cCCeeecceecccCCeeEEEEE-EcCCCEEEEEEeeccC-ccchhHHHHHHHHHhcccccCCCeeeeecceecCCCc---
Q 039630           33 TNGFRTSNKIGEGGFGSVYKGR-LEDGTVVAVNVLSVES-KQGETEFMSEVASMANINICHENLVKLHGGCIDGPSR---  107 (174)
Q Consensus        33 ~~~~~~~~~lg~G~~g~V~~~~-~~~~~~~avK~~~~~~-~~~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~~~~~~---  107 (174)
                      +..|++++.||+|+||.||+|. ..+|+.||||+++... ......+.+|+.+|+.++  |||++++++.+......   
T Consensus         7 ~~rY~~~~~LG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~Ei~il~~l~--hp~iv~~~~~~~~~~~~~~~   84 (345)
T d1pmea_           7 GPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFR--HENIIGINDIIRAPTIEQMK   84 (345)
T ss_dssp             CTTEEEEEECC---CCCEEEEEETTTCSEEEEEEECCTTCHHHHHHHHHHHHHHHHCC--CTTBCCCCEEECCSSTTTCC
T ss_pred             CCCeEEEEEEeeccCeEEEEEEECCCCcEEEEEEEehhcChHHHHHHHHHHHHHHHcC--CCCCCcEEEEEeeccccccc
Confidence            3569999999999999999998 5689999999997543 334567889999999999  99999999998765431   


Q ss_pred             -ccchhhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhcc
Q 039630          108 -ILAPLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEI  170 (174)
Q Consensus       108 -~lv~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  170 (174)
                       ++++  ++..++.|...+.                 ...+++..+..++.|++.||+|||++.
T Consensus        85 ~~~l~--~~~~~g~L~~~l~-----------------~~~l~~~~i~~i~~qil~al~yLH~~~  129 (345)
T d1pmea_          85 DVYLV--THLMGADLYKLLK-----------------TQHLSNDHICYFLYQILRGLKYIHSAN  129 (345)
T ss_dssp             CEEEE--EECCCEEHHHHHH-----------------HCCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             eEEEE--EeecCCchhhhhh-----------------cCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence             2222  3334444443221                 124899999999999999999999863

>d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-jun N-terminal kinase (jnk3s)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.74  E-value=3e-18  Score=124.74  Aligned_cols=114  Identities=17%  Similarity=0.185  Sum_probs=88.2

Q ss_pred             CCeeecceecccCCeeEEEEE-EcCCCEEEEEEeeccC--ccchhHHHHHHHHHhcccccCCCeeeeecceecC------
Q 039630           34 NGFRTSNKIGEGGFGSVYKGR-LEDGTVVAVNVLSVES--KQGETEFMSEVASMANINICHENLVKLHGGCIDG------  104 (174)
Q Consensus        34 ~~~~~~~~lg~G~~g~V~~~~-~~~~~~~avK~~~~~~--~~~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~~~------  104 (174)
                      +.|+++++||+|+||.||+|. ..+|+.||||+++...  ......+.+|+.+++.++  ||||+++++++...      
T Consensus        17 ~~Y~i~~~LG~G~fg~V~~~~d~~t~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~--hpnIv~~~~~f~~~~~~~~~   94 (355)
T d2b1pa1          17 KRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVN--HKNIISLLNVFTPQKTLEEF   94 (355)
T ss_dssp             TTEEEEEECSCC--CEEEEEEETTTTEEEEEEEEESTTSSHHHHHHHHHHHHHHHHCC--CTTBCCCSEEECSCCSTTTC
T ss_pred             CCeEEEEEeecCcCeEEEEEEECCCCCEEEEEEEChhhcCHHHHHHHHHHHHHHHhcC--CCCeeEEEEEEecccccccC
Confidence            579999999999999999999 5679999999997552  334556889999999999  99999999999654      


Q ss_pred             CCcccchhhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhcc
Q 039630          105 PSRILAPLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEI  170 (174)
Q Consensus       105 ~~~~lv~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  170 (174)
                      ...++++  ++..++.+.. .                  ...+++..+..++.|++.||.|||++.
T Consensus        95 ~~~~iv~--Ey~~~~l~~~-~------------------~~~~~~~~i~~~~~qil~gl~~LH~~g  139 (355)
T d2b1pa1          95 QDVYLVM--ELMDANLCQV-I------------------QMELDHERMSYLLYQMLCGIKHLHSAG  139 (355)
T ss_dssp             CEEEEEE--ECCSEEHHHH-H------------------TSCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             ceeEEEE--eccchHHHHh-h------------------hcCCCHHHHHHHHHHHHHHHHHhhhcc
Confidence            3456666  5444433221 1                  124788999999999999999999864

>d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Hepatocyte growth factor receptor, c-MET
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.74  E-value=4.5e-18  Score=121.65  Aligned_cols=113  Identities=23%  Similarity=0.329  Sum_probs=87.2

Q ss_pred             cceecccCCeeEEEEEEcC----CCEEEEEEeecc-CccchhHHHHHHHHHhcccccCCCeeeeecceecC-CCcccchh
Q 039630           39 SNKIGEGGFGSVYKGRLED----GTVVAVNVLSVE-SKQGETEFMSEVASMANINICHENLVKLHGGCIDG-PSRILAPL  112 (174)
Q Consensus        39 ~~~lg~G~~g~V~~~~~~~----~~~~avK~~~~~-~~~~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~~~-~~~~lv~~  112 (174)
                      .++||+|+||+||+|.+..    ...||||.++.. .......+.+|+.++.+++  ||||++++|++... +..++|+ 
T Consensus        32 ~~~iG~G~fg~Vyk~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~--HpnIv~~~g~~~~~~~~~~lv~-  108 (311)
T d1r0pa_          32 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFS--HPNVLSLLGICLRSEGSPLVVL-  108 (311)
T ss_dssp             EEEEEEETTEEEEEEEECC----CEEEEEEEECCCCCHHHHHHHHHHHHHHHTCC--CTTBCCCCEEEEETTTEEEEEE-
T ss_pred             ceEEeecCCeEEEEEEEECCCCEEEEEEEEEECcccCHHHHHHHHHHHHHHHhCC--CCCEeEEeEEEEecCCceEEEE-
Confidence            5789999999999999532    236899999743 3445678999999999999  99999999998764 4567777 


Q ss_pred             hhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhcc
Q 039630          113 QASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEI  170 (174)
Q Consensus       113 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  170 (174)
                       ++.+++.+...+.               .....+++..++.++.|++.||.|||+..
T Consensus       109 -E~~~~g~l~~~~~---------------~~~~~~~~~~~~~i~~qia~gL~~lH~~~  150 (311)
T d1r0pa_         109 -PYMKHGDLRNFIR---------------NETHNPTVKDLIGFGLQVAKGMKFLASKK  150 (311)
T ss_dssp             -ECCTTCBHHHHHH---------------CTTCCCBHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             -EEeecCchhhhhc---------------cccccchHHHHHHHHHHHHHhhhhhcccC
Confidence             6666666654331               22234677888899999999999999753

>d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 9, CDK9
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.74  E-value=6.2e-18  Score=121.28  Aligned_cols=118  Identities=26%  Similarity=0.329  Sum_probs=87.1

Q ss_pred             cCCeeecceecccCCeeEEEEE-EcCCCEEEEEEeecc--CccchhHHHHHHHHHhcccccCCCeeeeecceecCCC---
Q 039630           33 TNGFRTSNKIGEGGFGSVYKGR-LEDGTVVAVNVLSVE--SKQGETEFMSEVASMANINICHENLVKLHGGCIDGPS---  106 (174)
Q Consensus        33 ~~~~~~~~~lg~G~~g~V~~~~-~~~~~~~avK~~~~~--~~~~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~~~~~---  106 (174)
                      .++|++++.||+|+||.||+|. ..+|+.||||++...  .......+.+|+.+|+.++  |+|++++++.+.....   
T Consensus         9 ~~rY~i~~~LG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~--h~nii~~~~~~~~~~~~~~   86 (318)
T d3blha1           9 VSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLK--HENVVNLIEICRTKASPYN   86 (318)
T ss_dssp             GGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEC----CTTSSCHHHHHHHHHHHHCC--CTTBCCEEEEEEC------
T ss_pred             cCCEEEEEEEecCcCeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHHHhc--CCCccceEeeeeccccccc
Confidence            3679999999999999999999 467999999998655  2334567889999999999  9999999999866432   


Q ss_pred             -----cccchhhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhcc
Q 039630          107 -----RILAPLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEI  170 (174)
Q Consensus       107 -----~~lv~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  170 (174)
                           .++++  ++...+.+...                ......+++..+..++.|++.||.|||++.
T Consensus        87 ~~~~~~~iv~--e~~~~~~~~~~----------------~~~~~~~~~~~~~~i~~qil~~l~~lH~~~  137 (318)
T d3blha1          87 RCKGSIYLVF--DFCEHDLAGLL----------------SNVLVKFTLSEIKRVMQMLLNGLYYIHRNK  137 (318)
T ss_dssp             ----CEEEEE--ECCCEEHHHHH----------------TCTTCCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             ccCceEEEEE--eccCCCccchh----------------hhcccccccHHHHHHHHHHHHHHHHhccCC
Confidence                 34444  33333332221                123345788899999999999999999853

>d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase activated protein kinase 2, mapkap2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.72  E-value=4.1e-18  Score=123.02  Aligned_cols=114  Identities=15%  Similarity=0.182  Sum_probs=87.9

Q ss_pred             CCeeecc-eecccCCeeEEEEE-EcCCCEEEEEEeeccCccchhHHHHHHHHHhcc-cccCCCeeeeecceec----CCC
Q 039630           34 NGFRTSN-KIGEGGFGSVYKGR-LEDGTVVAVNVLSVESKQGETEFMSEVASMANI-NICHENLVKLHGGCID----GPS  106 (174)
Q Consensus        34 ~~~~~~~-~lg~G~~g~V~~~~-~~~~~~~avK~~~~~~~~~~~~~~~e~~~l~~l-~~~h~~i~~~~~~~~~----~~~  106 (174)
                      ++|.+.. .||+|+||.||+|. ..+++.||+|+++.     ...+.+|+.++.++ +  ||||+++++++.+    ...
T Consensus        11 ~~y~i~~~~lG~G~fg~Vy~a~~~~~~~~vAiK~i~~-----~~~~~~E~~~~~~~~~--hpnIv~l~~~~~~~~~~~~~   83 (335)
T d2ozaa1          11 DDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQD-----CPKARREVELHWRASQ--CPHIVRIVDVYENLYAGRKC   83 (335)
T ss_dssp             GTEEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEC-----SHHHHHHHHHHHHHTT--STTBCCEEEEEEEEETTEEE
T ss_pred             cCEEEeeEEeeeccCeEEEEEEECCCCCEEEEEEECC-----cHHHHHHHHHHHHhcC--CCCCCeEEEEEeecccCCCE
Confidence            4688764 69999999999999 57799999999963     34567899887654 6  9999999999865    244


Q ss_pred             cccchhhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhcc
Q 039630          107 RILAPLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEI  170 (174)
Q Consensus       107 ~~lv~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  170 (174)
                      .++++  ++++++.|...+..              .....+++..+..++.|++.||+|||++.
T Consensus        84 ~~ivm--Ey~~gg~L~~~i~~--------------~~~~~l~e~~~~~i~~qi~~al~ylH~~~  131 (335)
T d2ozaa1          84 LLIVM--ECLDGGELFSRIQD--------------RGDQAFTEREASEIMKSIGEAIQYLHSIN  131 (335)
T ss_dssp             EEEEE--ECCCSEEHHHHHHS--------------CSCCCEEHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             EEEEE--ECCCCCcHHHHHHh--------------cCCCCcCHHHHHHHHHHHHHHHHHHHHcC
Confidence            56666  77777777654321              11235899999999999999999999853

>d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Glycogen synthase kinase-3 beta (Gsk3b)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.72  E-value=7.1e-18  Score=122.51  Aligned_cols=112  Identities=21%  Similarity=0.310  Sum_probs=84.0

Q ss_pred             CeeecceecccCCeeEEEEE-EcCCCEEEEEEeeccCccchhHHHHHHHHHhcccccCCCeeeeecceecCC------Cc
Q 039630           35 GFRTSNKIGEGGFGSVYKGR-LEDGTVVAVNVLSVESKQGETEFMSEVASMANINICHENLVKLHGGCIDGP------SR  107 (174)
Q Consensus        35 ~~~~~~~lg~G~~g~V~~~~-~~~~~~~avK~~~~~~~~~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~~~~------~~  107 (174)
                      +|...++||+|+||.||+|. ..+|+.||||+++....    ...+|+.+|++++  |+||+++++++....      ..
T Consensus        21 ~Y~~~k~LG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~----~~~~Ei~il~~l~--h~niv~~~~~~~~~~~~~~~~~~   94 (350)
T d1q5ka_          21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKR----FKNRELQIMRKLD--HCNIVRLRYFFYSSGEKKDEVYL   94 (350)
T ss_dssp             EEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSS----SCCHHHHHHHHCC--CTTBCCEEEEEEEC--CCSCCEE
T ss_pred             CcEeeeEEeeCcCeEEEEEEECCCCCEEEEEEECccch----HHHHHHHHHHhcC--CCCCCcEEEEEEecCccCCceEE
Confidence            47788999999999999999 46799999999975422    2247999999999  999999999985432      23


Q ss_pred             ccchhhhhhhhhhhh--hhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhc
Q 039630          108 ILAPLQASIEALFLF--TKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEE  169 (174)
Q Consensus       108 ~lv~~~~~~~~~~l~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~  169 (174)
                      ++++  ++.+.+...  ...               ......+++..+..++.||+.||+|||++
T Consensus        95 ~lv~--Ey~~~~~~~~l~~~---------------~~~~~~l~~~~~~~i~~qil~aL~yLH~~  141 (350)
T d1q5ka_          95 NLVL--DYVPETVYRVARHY---------------SRAKQTLPVIYVKLYMYQLFRSLAYIHSF  141 (350)
T ss_dssp             EEEE--ECCSEEHHHHHHHH---------------HHTTCCCCHHHHHHHHHHHHHHHHHHHTT
T ss_pred             EEEE--eccCCccHHHHHhh---------------hhccCCCCHHHHHHHHHHHHHHHHHHHhc
Confidence            4555  555443221  111               11234589999999999999999999986

>d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK6
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.71  E-value=6.8e-18  Score=120.37  Aligned_cols=119  Identities=22%  Similarity=0.360  Sum_probs=86.2

Q ss_pred             cCCeeecceecccCCeeEEEEEE-cC-CCEEEEEEeeccC--ccchhHHHHHHHHHhcc---cccCCCeeeeecceecC-
Q 039630           33 TNGFRTSNKIGEGGFGSVYKGRL-ED-GTVVAVNVLSVES--KQGETEFMSEVASMANI---NICHENLVKLHGGCIDG-  104 (174)
Q Consensus        33 ~~~~~~~~~lg~G~~g~V~~~~~-~~-~~~~avK~~~~~~--~~~~~~~~~e~~~l~~l---~~~h~~i~~~~~~~~~~-  104 (174)
                      .++|++++.||+|+||.||+|.. .+ ++.||+|+++...  ......+.+|+.+++.+   +  ||||+++++++... 
T Consensus         6 ~~~Y~i~~~LG~G~fg~V~~a~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~~l~~l~~~~--HpnIv~~~~~~~~~~   83 (305)
T d1blxa_           6 DQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFE--HPNVVRLFDVCTVSR   83 (305)
T ss_dssp             GGTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEEEEEBCTTSCBCTHHHHHHHHHHHHHTC--CTTBCCEEEEEEEEE
T ss_pred             cCCEEEEEEEecccCeEEEEEEEECCCCEEEEEEEEehhhccchHHHHHHHHHHHHHHHhhcC--CCCcceeeeeecccc
Confidence            46799999999999999999984 44 5679999997542  23344577888887765   6  99999999998542 


Q ss_pred             ----CCcccchhhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhcc
Q 039630          105 ----PSRILAPLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEI  170 (174)
Q Consensus       105 ----~~~~lv~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  170 (174)
                          ...++++  ++..++.+....               ......+++..+..++.|++.||+|||++.
T Consensus        84 ~~~~~~~~~~~--e~~~~~~~~~~~---------------~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~  136 (305)
T d1blxa_          84 TDRETKLTLVF--EHVDQDLTTYLD---------------KVPEPGVPTETIKDMMFQLLRGLDFLHSHR  136 (305)
T ss_dssp             CSSEEEEEEEE--ECCSCBHHHHHH---------------HSCTTCSCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             cccCceEEEEE--EeccCCchhhhh---------------hccCCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence                2344444  555444332211               122345789999999999999999999854

>d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Type I TGF-beta receptor R4
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.70  E-value=2.6e-17  Score=117.29  Aligned_cols=112  Identities=28%  Similarity=0.364  Sum_probs=85.4

Q ss_pred             cCCeeecceecccCCeeEEEEEEcCCCEEEEEEeeccCccchhHHHHHHHHH--hcccccCCCeeeeecceecCC----C
Q 039630           33 TNGFRTSNKIGEGGFGSVYKGRLEDGTVVAVNVLSVESKQGETEFMSEVASM--ANINICHENLVKLHGGCIDGP----S  106 (174)
Q Consensus        33 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~avK~~~~~~~~~~~~~~~e~~~l--~~l~~~h~~i~~~~~~~~~~~----~  106 (174)
                      +.+|.+.+.||+|+||.||+|+. +|..||||.++..   ....+..|.+++  ..++  ||||+++++++...+    .
T Consensus         2 ~~~~~l~~~iG~G~fg~Vy~~~~-~g~~vAvK~~~~~---~~~~~~~e~ei~~~~~~~--HpnIv~~~~~~~~~~~~~~~   75 (303)
T d1vjya_           2 ARTIVLQESIGKGRFGEVWRGKW-RGEEVAVKIFSSR---EERSWFREAEIYQTVMLR--HENILGFIAADNKDNGTWTQ   75 (303)
T ss_dssp             GGGEEEEEEEECCSSSEEEEEEE-TTEEEEEEEECGG---GHHHHHHHHHHHTSTTCC--CTTBCCEEEEEEEECSSSEE
T ss_pred             CcEEEEEEEEeeCCCeEEEEEEE-CCEEEEEEEECcc---chhHHHHHHHHHHHhhCC--CCcCcceEEEEEeCCCcceE
Confidence            35688889999999999999986 4889999999643   233444555544  5667  999999999998764    3


Q ss_pred             cccchhhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhc
Q 039630          107 RILAPLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEE  169 (174)
Q Consensus       107 ~~lv~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~  169 (174)
                      .++|+  ++.+++.|...+.                 ...+++..++.++.|+|.||+|||+.
T Consensus        76 ~~lv~--Ey~~~g~L~~~l~-----------------~~~l~~~~~~~~~~~ia~gl~~lH~~  119 (303)
T d1vjya_          76 LWLVS--DYHEHGSLFDYLN-----------------RYTVTVEGMIKLALSTASGLAHLHME  119 (303)
T ss_dssp             EEEEE--ECCTTCBHHHHHH-----------------HCCBCHHHHHHHHHHHHHHHHHHHCC
T ss_pred             EEEEE--ecccCCCHHHHHh-----------------cCCCCHHHHHHHHHHHHHHHHHHHHh
Confidence            45666  7777776665431                 12478999999999999999999874

>d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Ribosomal protein S6 kinase alpha 5, Msk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.68  E-value=1.1e-17  Score=120.11  Aligned_cols=117  Identities=23%  Similarity=0.244  Sum_probs=94.0

Q ss_pred             CCeeecceecccCCeeEEEEEE----cCCCEEEEEEeecc----CccchhHHHHHHHHHhcccccC-CCeeeeecceecC
Q 039630           34 NGFRTSNKIGEGGFGSVYKGRL----EDGTVVAVNVLSVE----SKQGETEFMSEVASMANINICH-ENLVKLHGGCIDG  104 (174)
Q Consensus        34 ~~~~~~~~lg~G~~g~V~~~~~----~~~~~~avK~~~~~----~~~~~~~~~~e~~~l~~l~~~h-~~i~~~~~~~~~~  104 (174)
                      ++|++++.||+|+||.||+|..    .+|+.||+|+++..    .....+.+.+|+.++++++  | |||+++++.+.+.
T Consensus        24 ~~y~~~~~IG~G~fg~Vy~~~~~~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~~E~~il~~l~--h~pnIv~~~~~~~~~  101 (322)
T d1vzoa_          24 ENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIR--QSPFLVTLHYAFQTE  101 (322)
T ss_dssp             GGEEEEEEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHH--TCTTBCCEEEEEEET
T ss_pred             hceEEEEEEecCCCeEEEEEEECccCCCCcEEEEEEEehHHhccchHHHHHHHHHHHHHHhcc--CCCeEEEeeeeeccC
Confidence            5699999999999999999983    25789999999644    2234567889999999997  6 8999999999999


Q ss_pred             CCcccchhhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhcc
Q 039630          105 PSRILAPLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEI  170 (174)
Q Consensus       105 ~~~~lv~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  170 (174)
                      +..++++  ++..++.+...+.                ....+++.....++.|++.||.|||++.
T Consensus       102 ~~~~~v~--e~~~~~~L~~~i~----------------~~~~~~e~~~~~~~~Qi~~al~~lH~~~  149 (322)
T d1vzoa_         102 TKLHLIL--DYINGGELFTHLS----------------QRERFTEHEVQIYVGEIVLALEHLHKLG  149 (322)
T ss_dssp             TEEEEEE--CCCCSCBHHHHHH----------------HHSCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             Cceeeee--ecccccHHHHHHH----------------hcccccHHHHHHHHHHHHHHHHHhhcCC
Confidence            8888888  7667676665432                2224678888899999999999999853

>d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.64  E-value=4.4e-16  Score=110.62  Aligned_cols=115  Identities=19%  Similarity=0.273  Sum_probs=84.5

Q ss_pred             CCeeecceecccCCeeEEEEE-EcCCCEEEEEEeeccCccchhHHHHHHHHHhcccccCCCee-eeecceecCCCcccch
Q 039630           34 NGFRTSNKIGEGGFGSVYKGR-LEDGTVVAVNVLSVESKQGETEFMSEVASMANINICHENLV-KLHGGCIDGPSRILAP  111 (174)
Q Consensus        34 ~~~~~~~~lg~G~~g~V~~~~-~~~~~~~avK~~~~~~~~~~~~~~~e~~~l~~l~~~h~~i~-~~~~~~~~~~~~~lv~  111 (174)
                      +.|++.+.||+|+||.||+|. ..+++.||||++....  ....+..|+.+++.++  |++++ .+.++....+..++++
T Consensus         7 ~rY~l~~~iG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~--~~~~~~~E~~i~~~l~--~~~~i~~~~~~~~~~~~~~ivm   82 (299)
T d1ckia_           7 NRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKT--KHPQLHIESKIYKMMQ--GGVGIPTIRWCGAEGDYNVMVM   82 (299)
T ss_dssp             TTEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEESCT--TSCCHHHHHHHHHHST--TSTTCCCEEEEEEETTEEEEEE
T ss_pred             CEEEEeEEEeeCCCcEEEEEEECCCCCEEEEEEEchhc--cCHHHHHHHHHHHHcc--CCCcccEEEEEEecCCEEEEEE
Confidence            469999999999999999998 5678999999987542  2345788999999998  66654 4455556666666666


Q ss_pred             hhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhcc
Q 039630          112 LQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEI  170 (174)
Q Consensus       112 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  170 (174)
                        ++.++..... +               ......+++..+..++.|++.||+|||++.
T Consensus        83 --e~~~~~l~~~-~---------------~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~  123 (299)
T d1ckia_          83 --ELLGPSLEDL-F---------------NFCSRKFSLKTVLLLADQMISRIEYIHSKN  123 (299)
T ss_dssp             --ECCCCBHHHH-H---------------HHTTTCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             --EEcCCchhhh-h---------------hhccCCCcHHHHHHHHHHHHHHHHHHHHCC
Confidence              4443332221 1               112235889999999999999999999853

>d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]

Probab=99.63  E-value=5.9e-16  Score=109.70  Aligned_cols=117  Identities=19%  Similarity=0.206  Sum_probs=89.7

Q ss_pred             cCCeeecceecccCCeeEEEEE-EcCCCEEEEEEeeccCccchhHHHHHHHHHhcccccCCCeeeeecceecCCCcccch
Q 039630           33 TNGFRTSNKIGEGGFGSVYKGR-LEDGTVVAVNVLSVESKQGETEFMSEVASMANINICHENLVKLHGGCIDGPSRILAP  111 (174)
Q Consensus        33 ~~~~~~~~~lg~G~~g~V~~~~-~~~~~~~avK~~~~~~~~~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~~~~~~~lv~  111 (174)
                      .++|++++.||+|+||.||+|. ..+|+.||+|+++...  ....+.+|+.++..+. .++|++.+++.+......++++
T Consensus         4 g~~Y~i~~~iG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~--~~~~~~~e~~~~~~l~-~~~~i~~~~~~~~~~~~~~~vm   80 (293)
T d1csna_           4 GVHYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRS--DAPQLRDEYRTYKLLA-GCTGIPNVYYFGQEGLHNVLVI   80 (293)
T ss_dssp             TTTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEECCT--TSCCHHHHHHHHHHTT-TCTTCCCEEEEEEETTEEEEEE
T ss_pred             CCceEEEEEEecCCCeEEEEEEECCCCCEEEEEEEcccc--CcHHHHHHHHHHHHhc-CCCCCCEEEEEeecCCccEEEE
Confidence            4679999999999999999999 5678999999986442  2345678888898887 3589999999999888888888


Q ss_pred             hhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhcc
Q 039630          112 LQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEI  170 (174)
Q Consensus       112 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  170 (174)
                        ++.+ +.+...+               ......++......++.|++.||+|||++.
T Consensus        81 --e~~~-~~l~~~~---------------~~~~~~~~~~~~~~i~~q~~~~l~~lH~~g  121 (293)
T d1csna_          81 --DLLG-PSLEDLL---------------DLCGRKFSVKTVAMAAKQMLARVQSIHEKS  121 (293)
T ss_dssp             --ECCC-CBHHHHH---------------HHTTTCCCHHHHHHHHHHHHHHHHHHHTTT
T ss_pred             --EecC-CCHHHHH---------------HhhccchhhHHHHHHHHHHHHHHHHHHHCC
Confidence              4432 2222211               012234788999999999999999999853

>d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Sky1p
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.50  E-value=1.2e-14  Score=105.55  Aligned_cols=121  Identities=17%  Similarity=0.224  Sum_probs=82.3

Q ss_pred             CCeeecceecccCCeeEEEEE-EcCCCEEEEEEeeccCccchhHHHHHHHHHhccc---------ccCCCeeeeecceec
Q 039630           34 NGFRTSNKIGEGGFGSVYKGR-LEDGTVVAVNVLSVESKQGETEFMSEVASMANIN---------ICHENLVKLHGGCID  103 (174)
Q Consensus        34 ~~~~~~~~lg~G~~g~V~~~~-~~~~~~~avK~~~~~~~~~~~~~~~e~~~l~~l~---------~~h~~i~~~~~~~~~  103 (174)
                      ++|++++.||+|+||.||+|. ..+|+.||||+++.. ......+.+|+.+++.+.         +.|+||+++++.+..
T Consensus        13 ~rY~i~~~LG~G~fg~Vy~~~~~~~g~~vAvKvi~~~-~~~~~~~~~Ei~~l~~l~~~~~~~~~~~~~~~iv~~~~~~~~   91 (362)
T d1q8ya_          13 ARYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGD-KVYTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLLDHFNH   91 (362)
T ss_dssp             TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSC-HHHHHHHHHHHHHHHHHHHTCCSHHHHHHHTTBCCCCEEEEE
T ss_pred             CcEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEecc-ccchHHHHHHHHHHHHhcchhhhhhhhcCcCceEEEEEEeee
Confidence            359999999999999999999 567999999999744 223456778888887764         125788889888765


Q ss_pred             CCC--cccchhhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhcc
Q 039630          104 GPS--RILAPLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEI  170 (174)
Q Consensus       104 ~~~--~~lv~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  170 (174)
                      .+.  ..+++.++...........               ......+++..+..++.|++.||+|||++.
T Consensus        92 ~~~~~~~~~~~~~~~~~~~~~~~~---------------~~~~~~~~~~~i~~i~~qil~al~~lh~~~  145 (362)
T d1q8ya_          92 KGPNGVHVVMVFEVLGENLLALIK---------------KYEHRGIPLIYVKQISKQLLLGLDYMHRRC  145 (362)
T ss_dssp             EETTEEEEEEEECCCCEEHHHHHH---------------HTTTSCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             ccccceeeeeeecccccccccccc---------------cccccCCcHHHHHHHHHHHHHHHHHHhhhc
Confidence            432  2222211211111111110               123345788899999999999999999743

>d1zara2 d.144.1.9 (A:91-281) Rio2 serine protein kinase C-terminal domain {Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: RIO1-like kinases
domain: Rio2 serine protein kinase C-terminal domain
species: Archaeoglobus fulgidus [TaxId: 2234]

Probab=99.25  E-value=9.3e-12  Score=82.40  Aligned_cols=102  Identities=13%  Similarity=0.046  Sum_probs=66.6

Q ss_pred             eecceecccCCeeEEEEEEcCCCEEEEEEeeccCcc------------------chhHHHHHHHHHhcccccCCCeeeee
Q 039630           37 RTSNKIGEGGFGSVYKGRLEDGTVVAVNVLSVESKQ------------------GETEFMSEVASMANINICHENLVKLH   98 (174)
Q Consensus        37 ~~~~~lg~G~~g~V~~~~~~~~~~~avK~~~~~~~~------------------~~~~~~~e~~~l~~l~~~h~~i~~~~   98 (174)
                      .+.+.||+|+||.||+|...+|+.||||+++.....                  .......|...+.++.  +.+++..+
T Consensus         3 ~vg~~IG~G~~g~Vy~a~~~~g~~vAvKi~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~--~~~v~~~~   80 (191)
T d1zara2           3 AIGKLMGEGKESAVFNCYSEKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKLQ--GLAVPKVY   80 (191)
T ss_dssp             EEEEEEEECSSEEEEEEEETTTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHTT--TSSSCCEE
T ss_pred             hhCCEeeeCcceEEEEEECCCCCEEEEEEEecccchhhhhhhhhhhccHHHHHHHHHHHHHHHHHHHHcc--CCCcceEE
Confidence            467899999999999999778999999987643110                  0123456777888887  88887766


Q ss_pred             cceecCCCcccchhhhhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhc
Q 039630           99 GGCIDGPSRILAPLQASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEE  169 (174)
Q Consensus        99 ~~~~~~~~~~lv~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~  169 (174)
                      +...    .++++            +++++...             ..++......++.|++.++.|||++
T Consensus        81 ~~~~----~~lvm------------e~~~~~~~-------------~~l~~~~~~~i~~ql~~~l~~lH~~  122 (191)
T d1zara2          81 AWEG----NAVLM------------ELIDAKEL-------------YRVRVENPDEVLDMILEEVAKFYHR  122 (191)
T ss_dssp             EEET----TEEEE------------ECCCCEEG-------------GGCCCSCHHHHHHHHHHHHHHHHHT
T ss_pred             EecC----CEEEE------------Eeeccccc-------------cchhhHHHHHHHHHHHHHHHHHhhC
Confidence            5421    12333            22222111             1123334456899999999999875

>d1j7la_ d.144.1.6 (A:) Type IIIa 3',5"-aminoglycoside phosphotransferase {Enterococcus faecalis [TaxId: 1351]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: Type IIIa 3',5"-aminoglycoside phosphotransferase
species: Enterococcus faecalis [TaxId: 1351]

Probab=96.48  E-value=0.0072  Score=40.26  Aligned_cols=113  Identities=11%  Similarity=-0.047  Sum_probs=68.3

Q ss_pred             CCeeecceecccCCeeEEEEEEcCCCEEEEEEeeccCccchhHHHHHHHHHhcccccCCCeeeeecceecCCCcccchhh
Q 039630           34 NGFRTSNKIGEGGFGSVYKGRLEDGTVVAVNVLSVESKQGETEFMSEVASMANINICHENLVKLHGGCIDGPSRILAPLQ  113 (174)
Q Consensus        34 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~avK~~~~~~~~~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~~~~~~~lv~~~  113 (174)
                      ..++..+..+.++.+.||+... ++..+.+|............+.+|..++..+. .+-.+.+++.....++..++++  
T Consensus        14 ~~~~~~~~~~G~s~~~v~rv~~-~~~~~vlk~~~~~~~~~~~~~~~E~~~l~~l~-~~vpvP~vl~~~~~~~~~~lv~--   89 (263)
T d1j7la_          14 EKYRCVKDTEGMSPAKVYKLVG-ENENLYLKMTDSRYKGTTYDVEREKDMMLWLE-GKLPVPKVLHFERHDGWSNLLM--   89 (263)
T ss_dssp             TTSEEEECSCCCSSSEEEEEEC-SSCEEEEEEECGGGTTSTTCHHHHHHHHHHHT-TTSCCCCEEEEEEETTEEEEEE--
T ss_pred             hceEEEEcCCCCCCCcEEEEEe-CCCeEEEEEcCCCcccchhhHHHHHHHHHHHh-ccCCCCcEEEEEecCCceEEEE--
Confidence            4566555544444578998764 35567888876554444556778888877765 2444566666666666666766  


Q ss_pred             hhhhhhhhhhhhhcccceeeeeeecCCCCCcccCCHHHHHHHHHHHHHHHHHhhhccC
Q 039630          114 ASIEALFLFTKLWKMDKFISIYVVSGSKKNRVKFNWIARREIALGIARGLAYIHEEIK  171 (174)
Q Consensus       114 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~gl~yLH~~~~  171 (174)
                      +..++..+....                     .+......++.+++..++-||+...
T Consensus        90 ~~l~G~~~~~~~---------------------~~~~~~~~~~~~l~~~l~~lH~~~~  126 (263)
T d1j7la_          90 SEADGVLCSEEY---------------------EDEQSPEKIIELYAECIRLFHSIDI  126 (263)
T ss_dssp             ECCSSEEHHHHT---------------------TTCSCHHHHHHHHHHHHHHHHTSCC
T ss_pred             Eecccccccccc---------------------cccccHHHHHHHHHHHHHHHhccCc
Confidence            555554443311                     0111123367778888999997543

>d1nd4a_ d.144.1.6 (A:) Aminoglycoside 3'-phosphotransferase IIa (Kanamycin kinase) {Bacteria (Klebsiella pneumoniae) [TaxId: 573]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: Aminoglycoside 3'-phosphotransferase IIa (Kanamycin kinase)
species: Bacteria (Klebsiella pneumoniae) [TaxId: 573]

Probab=94.24  E-value=0.057  Score=35.47  Aligned_cols=68  Identities=12%  Similarity=0.029  Sum_probs=42.1

Q ss_pred             eecccCC-eeEEEEEEcCCCEEEEEEeeccCccchhHHHHHHHHHhcccccCCCeeeeecceecCCCcccch
Q 039630           41 KIGEGGF-GSVYKGRLEDGTVVAVNVLSVESKQGETEFMSEVASMANINICHENLVKLHGGCIDGPSRILAP  111 (174)
Q Consensus        41 ~lg~G~~-g~V~~~~~~~~~~~avK~~~~~~~~~~~~~~~e~~~l~~l~~~h~~i~~~~~~~~~~~~~~lv~  111 (174)
                      .+..|.. +.||+....++..+.+|..+..   ....+..|..+++.+......+.+++.....++..++++
T Consensus        17 ~~~~G~s~~~v~r~~~~~~~~~vlK~~~~~---~~~~l~~E~~~l~~L~~~gvpvP~v~~~~~~~~~~~~v~   85 (255)
T d1nd4a_          17 QQTIGCSDAAVFRLSAQGRPVLFVKTDLSG---ALNELQDEAARLSWLATTGVPCAAVLDVVTEAGRDWLLL   85 (255)
T ss_dssp             ECSCTTSSCEEEEEECTTSCCEEEEEECSC---TTSCHHHHHHHHHHHHTTTCCBCCEEEEEECSSCEEEEE
T ss_pred             EcCCcccCCeEEEEEeCCCCEEEEEeCCcc---CHhHHHHHHHHHHHHHhcCCCCCceeeecccccceEEEE
Confidence            3445544 6789888777777888876533   333567777777766512333556666666665555555