BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 039633
         (31 letters)

Database: swissprot 
           539,616 sequences; 191,569,459 total letters

Searching..................................................done



>sp|C3SBU4|TNMT2_PAPBR Probable (S)-tetrahydroprotoberberine N-methyltransferase 2
           OS=Papaver bracteatum PE=2 SV=1
          Length = 358

 Score = 52.0 bits (123), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 21/29 (72%), Positives = 25/29 (86%)

Query: 3   SANLPLYFQDDVSVIDHWLLNGMHFANKV 31
           SA+  LYFQDDVSV+DHW++NGMHFA  V
Sbjct: 265 SADSLLYFQDDVSVVDHWVVNGMHFARTV 293


>sp|C3SBU5|TNMT1_PAPBR (S)-tetrahydroprotoberberine N-methyltransferase 1 OS=Papaver
           bracteatum PE=1 SV=1
          Length = 358

 Score = 50.4 bits (119), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 20/29 (68%), Positives = 24/29 (82%)

Query: 3   SANLPLYFQDDVSVIDHWLLNGMHFANKV 31
           +AN  LYFQDDVSV+DHW++NGMH A  V
Sbjct: 265 AANSLLYFQDDVSVVDHWVVNGMHMARSV 293


>sp|Q108P1|TNMT_PAPSO (S)-tetrahydroprotoberberine N-methyltransferase OS=Papaver
           somniferum PE=1 SV=1
          Length = 358

 Score = 50.4 bits (119), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 20/29 (68%), Positives = 24/29 (82%)

Query: 3   SANLPLYFQDDVSVIDHWLLNGMHFANKV 31
           +AN  LYFQDDVSV+DHW++NGMH A  V
Sbjct: 265 AANSLLYFQDDVSVVDHWVVNGMHMARSV 293


>sp|Q5C9L6|CNMT_THLFG (S)-coclaurine N-methyltransferase OS=Thalictrum flavum subsp.
           glaucum PE=1 SV=1
          Length = 361

 Score = 47.4 bits (111), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 18/28 (64%), Positives = 24/28 (85%)

Query: 1   MPSANLPLYFQDDVSVIDHWLLNGMHFA 28
           +PSA+  LYFQDDVSV++HW L+G HF+
Sbjct: 266 IPSASFFLYFQDDVSVVNHWTLSGKHFS 293


>sp|C3SBS8|TNMT_ESCCA (S)-tetrahydroprotoberberine N-methyltransferase OS=Eschscholzia
           californica PE=1 SV=1
          Length = 350

 Score = 47.0 bits (110), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 18/29 (62%), Positives = 23/29 (79%)

Query: 3   SANLPLYFQDDVSVIDHWLLNGMHFANKV 31
           S++  LYFQDDVS +DHW++NGMH A  V
Sbjct: 258 SSSTLLYFQDDVSALDHWVVNGMHMARSV 286


>sp|C3SBW0|PNMT_THLFG Pavine N-methyltransferase OS=Thalictrum flavum subsp. glaucum PE=1
           SV=1
          Length = 356

 Score = 40.4 bits (93), Expect = 0.003,   Method: Composition-based stats.
 Identities = 15/26 (57%), Positives = 22/26 (84%)

Query: 1   MPSANLPLYFQDDVSVIDHWLLNGMH 26
           M S+++ LYFQ+DVSV++HW L+G H
Sbjct: 262 MSSSSILLYFQEDVSVVNHWTLSGKH 287


  Database: swissprot
    Posted date:  Mar 23, 2013  2:32 AM
  Number of letters in database: 191,569,459
  Number of sequences in database:  539,616
  
Lambda     K      H
   0.325    0.139    0.458 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 11,958,646
Number of Sequences: 539616
Number of extensions: 198354
Number of successful extensions: 651
Number of sequences better than 100.0: 6
Number of HSP's better than 100.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 645
Number of HSP's gapped (non-prelim): 6
length of query: 31
length of database: 191,569,459
effective HSP length: 6
effective length of query: 25
effective length of database: 188,331,763
effective search space: 4708294075
effective search space used: 4708294075
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 55 (25.8 bits)