Your job contains 1 sequence.
>039634
MTPEVDLLIKFKVSINGCPYTYTSLSIKVEIKDKPGYEHLNEPLHMLVEAEFPEVIINSC
LDHAVAILENLLKPVDESLDHYKKQQLRELAILNGTLREESPSMSPSMSPSMSPFNNAGM
KCAETGR
The BLAST search returned 1 gene product which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 039634
(127 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2024326 - symbol:AT1G09660 "AT1G09660" species... 279 2.0e-24 1
UNIPROTKB|Q75GR5 - symbol:SPIN1 "KH domain-containing pro... 265 6.1e-23 1
TAIR|locus:2161845 - symbol:AT5G56140 "AT5G56140" species... 244 1.0e-20 1
TAIR|locus:2077818 - symbol:AT3G08620 "AT3G08620" species... 224 1.4e-18 1
TAIR|locus:2064097 - symbol:AT2G38610 "AT2G38610" species... 208 6.7e-17 1
TAIR|locus:2176222 - symbol:AT5G51300 species:3702 "Arabi... 154 6.3e-10 1
UNIPROTKB|F5GXS8 - symbol:QKI "Protein quaking" species:9... 140 1.1e-09 1
UNIPROTKB|F5GYM3 - symbol:QKI "Protein quaking" species:9... 140 1.1e-09 1
UNIPROTKB|J9NVZ6 - symbol:QKI "Protein quaking" species:9... 140 3.1e-09 1
UNIPROTKB|F1PLY2 - symbol:QKI "Protein quaking" species:9... 140 3.9e-09 1
UNIPROTKB|F1SBW4 - symbol:QKI "Protein quaking" species:9... 140 3.9e-09 1
UNIPROTKB|F1N7N1 - symbol:QKI "Protein quaking" species:9... 140 4.0e-09 1
ZFIN|ZDB-GENE-040426-1462 - symbol:qki2 "QKI, KH domain c... 140 4.2e-09 1
UNIPROTKB|D4A2X0 - symbol:Qk "Protein Qk" species:10116 "... 140 4.8e-09 1
UNIPROTKB|F1PX61 - symbol:QKI "Protein quaking" species:9... 140 4.8e-09 1
UNIPROTKB|Q5W9D7 - symbol:QKI "Protein quaking" species:9... 140 4.9e-09 1
UNIPROTKB|Q9GMY1 - symbol:QKI "Protein quaking" species:9... 140 4.9e-09 1
UNIPROTKB|Q96PU8 - symbol:QKI "Protein quaking" species:9... 140 4.9e-09 1
UNIPROTKB|Q5W9D5 - symbol:QKI "Protein quaking" species:9... 140 4.9e-09 1
MGI|MGI:97837 - symbol:Qk "quaking" species:10090 "Mus mu... 140 4.9e-09 1
RGD|1584886 - symbol:Qk "quaking" species:10116 "Rattus n... 140 4.9e-09 1
UNIPROTKB|F1LMH5 - symbol:Qk "Protein Qk" species:10116 "... 140 4.9e-09 1
ZFIN|ZDB-GENE-990415-230 - symbol:qkia "QKI, KH domain co... 142 5.8e-09 1
UNIPROTKB|F1NWU9 - symbol:QKI "Protein quaking" species:9... 139 6.0e-09 1
UNIPROTKB|F1NWV0 - symbol:QKI "Protein quaking" species:9... 139 6.2e-09 1
UNIPROTKB|Q9YH18 - symbol:QKI "Protein quaking" species:9... 139 6.2e-09 1
ZFIN|ZDB-GENE-081028-54 - symbol:qkib "QKI, KH domain con... 139 6.4e-09 1
FB|FBgn0264491 - symbol:how "held out wings" species:7227... 138 1.1e-08 1
UNIPROTKB|G5EFF1 - symbol:asd-2 "Protein ASD-2, isoform c... 134 3.7e-08 1
WB|WBGene00006423 - symbol:asd-2 species:6239 "Caenorhabd... 134 4.2e-08 1
WB|WBGene00001595 - symbol:gld-1 species:6239 "Caenorhabd... 128 1.7e-07 1
WB|WBGene00022101 - symbol:Y69A2AR.32 species:6239 "Caeno... 113 5.4e-06 1
DICTYBASE|DDB_G0293554 - symbol:sf1 "CCHC-type zinc finge... 112 1.0e-05 1
WB|WBGene00044674 - symbol:B0280.17 species:6239 "Caenorh... 106 1.5e-05 1
RGD|620645 - symbol:Sf1 "splicing factor 1" species:10116... 97 4.8e-05 1
UNIPROTKB|F1RZV6 - symbol:KHDRBS2 "Uncharacterized protei... 98 0.00013 1
UNIPROTKB|E1BVW8 - symbol:KHDRBS2 "Uncharacterized protei... 98 0.00020 1
UNIPROTKB|E1BP48 - symbol:KHDRBS2 "Uncharacterized protei... 98 0.00020 1
UNIPROTKB|E2QWN2 - symbol:KHDRBS2 "Uncharacterized protei... 98 0.00020 1
UNIPROTKB|Q5VWX1 - symbol:KHDRBS2 "KH domain-containing, ... 98 0.00020 1
MGI|MGI:2159649 - symbol:Khdrbs2 "KH domain containing, R... 98 0.00020 1
RGD|621738 - symbol:Khdrbs2 "KH domain containing, RNA bi... 98 0.00020 1
POMBASE|SPCC962.06c - symbol:bpb1 "zinc finger splicing f... 101 0.00020 1
UNIPROTKB|I3LAN7 - symbol:LOC100625959 "Uncharacterized p... 90 0.00021 1
UNIPROTKB|E5RG12 - symbol:KHDRBS3 "KH domain-containing, ... 90 0.00025 1
ZFIN|ZDB-GENE-061013-497 - symbol:khdrbs2 "KH domain cont... 96 0.00032 1
UNIPROTKB|B4DX42 - symbol:SF1 "Splicing factor 1" species... 97 0.00035 1
UNIPROTKB|H0YAQ1 - symbol:KHDRBS3 "KH domain-containing, ... 90 0.00047 1
UNIPROTKB|H0YAQ3 - symbol:KHDRBS3 "KH domain-containing, ... 90 0.00048 1
UNIPROTKB|F1LM37 - symbol:Sf1 "Protein Sf1" species:10116... 97 0.00048 1
UNIPROTKB|E2RRT4 - symbol:SF1 "Uncharacterized protein" s... 97 0.00059 1
UNIPROTKB|A2VDM7 - symbol:SF1 "Uncharacterized protein" s... 97 0.00059 1
UNIPROTKB|Q15637 - symbol:SF1 "Splicing factor 1" species... 97 0.00059 1
UNIPROTKB|F1RQR0 - symbol:SF1 "Uncharacterized protein" s... 97 0.00059 1
FB|FBgn0025571 - symbol:SF1 "Splicing factor 1" species:7... 98 0.00060 1
MGI|MGI:1095403 - symbol:Sf1 "splicing factor 1" species:... 97 0.00061 1
UNIPROTKB|F1LSC3 - symbol:Sf1 "Protein Sf1" species:10116... 97 0.00061 1
ZFIN|ZDB-GENE-030131-2492 - symbol:sf1 "splicing factor 1... 97 0.00062 1
UNIPROTKB|K7GNY3 - symbol:KHDRBS3 "Uncharacterized protei... 90 0.00077 1
SGD|S000004106 - symbol:MSL5 "Component of the commitment... 94 0.00084 1
UNIPROTKB|E5RJZ9 - symbol:KHDRBS3 "KH domain-containing, ... 90 0.00092 1
>TAIR|locus:2024326 [details] [associations]
symbol:AT1G09660 "AT1G09660" species:3702 "Arabidopsis
thaliana" [GO:0003676 "nucleic acid binding" evidence=ISS]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR004087 PROSITE:PS50084 SMART:SM00322 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0003723
eggNOG:COG5176 EMBL:AC000132 KO:K14945 HSSP:Q32NN2
HOGENOM:HOG000238548 EMBL:AK118683 EMBL:AF419590 EMBL:AY079111
EMBL:BX842524 EMBL:AK175370 EMBL:AK175796 EMBL:AK176267
EMBL:AK176765 EMBL:AK176899 IPI:IPI00517028 IPI:IPI00535968
PIR:D86230 PIR:E86230 RefSeq:NP_172437.2 RefSeq:NP_973800.1
UniGene:At.10221 ProteinModelPortal:Q8GWR3 SMR:Q8GWR3 IntAct:Q8GWR3
EnsemblPlants:AT1G09660.1 GeneID:837494 KEGG:ath:AT1G09660
TAIR:At1g09660 InParanoid:Q8GWR3 OMA:VEASTQC PhylomeDB:Q8GWR3
ProtClustDB:CLSN2690390 Genevestigator:Q8GWR3 Uniprot:Q8GWR3
Length = 298
Score = 279 (103.3 bits), Expect = 2.0e-24, P = 2.0e-24
Identities = 54/76 (71%), Positives = 66/76 (86%)
Query: 26 SIKVE-IKDKPGYEHLNEPLHMLVEAEFPEVIINSCLDHAVAILENLLKPVDESLDHYKK 84
++K E +K KPGYEHL EPLH+L+EAE PE IINS L+HAV LE+LLKP+DES+DHYK+
Sbjct: 197 TVKEEKLKGKPGYEHLCEPLHVLIEAELPEDIINSRLEHAVHFLESLLKPMDESMDHYKR 256
Query: 85 QQLRELAILNGTLREE 100
+QL+ELA LNGTLREE
Sbjct: 257 EQLKELAALNGTLREE 272
>UNIPROTKB|Q75GR5 [details] [associations]
symbol:SPIN1 "KH domain-containing protein SPIN1"
species:39947 "Oryza sativa Japonica Group" [GO:0003677 "DNA
binding" evidence=IDA] [GO:0003723 "RNA binding" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=IDA] [GO:0048577 "negative regulation of short-day
photoperiodism, flowering" evidence=IMP] [GO:0048579 "negative
regulation of long-day photoperiodism, flowering" evidence=IMP]
InterPro:IPR004087 InterPro:IPR004088 Pfam:PF00013 PROSITE:PS50084
SMART:SM00322 GO:GO:0005634 GO:GO:0003677 EMBL:DP000009
EMBL:AP008209 GO:GO:0003723 GO:GO:0009908 GO:GO:0048577 HSSP:Q9BW01
eggNOG:COG5176 EMBL:CM000140 GO:GO:0048579 KO:K14945 OMA:IMRVSSI
EMBL:AC139172 EMBL:AK065405 RefSeq:NP_001051685.1 UniGene:Os.5675
ProteinModelPortal:Q75GR5 EnsemblPlants:LOC_Os03g60110.1
GeneID:4334557 KEGG:dosa:Os01t0886300-01 KEGG:dosa:Os03t0815700-01
KEGG:osa:4334557 Gramene:Q75GR5 ProtClustDB:CLSN2694450
Uniprot:Q75GR5
Length = 281
Score = 265 (98.3 bits), Expect = 6.1e-23, P = 6.1e-23
Identities = 54/98 (55%), Positives = 71/98 (72%)
Query: 30 EIKDKPGYEHLNEPLHMLVEAEFPEVIINSCLDHAVAILENLLKPVDESLDHYKKQQLRE 89
+++ KPGYEHL++PLH+L+EAEFP II++ L HA ++E LLKPVDES D YK+QQLRE
Sbjct: 189 KLRGKPGYEHLSDPLHILIEAEFPASIIDARLRHAQEVIEELLKPVDESQDFYKRQQLRE 248
Query: 90 LAILNGTLREEXXXXXXXXXXXXXXFNNAGMKCAETGR 127
LA+LN TLRE+ F+N GMK A+TG+
Sbjct: 249 LAMLNSTLREDSPHPGSVSP-----FSNGGMKRAKTGQ 281
>TAIR|locus:2161845 [details] [associations]
symbol:AT5G56140 "AT5G56140" species:3702 "Arabidopsis
thaliana" [GO:0003676 "nucleic acid binding" evidence=ISS]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR004087 PROSITE:PS50084 SMART:SM00322 GO:GO:0005634
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0003723 EMBL:AB011476
eggNOG:COG5176 KO:K14945 HSSP:Q32NN2 EMBL:AY080852 EMBL:BT000873
IPI:IPI00544767 RefSeq:NP_200425.1 UniGene:At.29404
ProteinModelPortal:Q9FKT4 SMR:Q9FKT4 PRIDE:Q9FKT4
EnsemblPlants:AT5G56140.1 GeneID:835713 KEGG:ath:AT5G56140
TAIR:At5g56140 HOGENOM:HOG000238548 InParanoid:Q9FKT4 OMA:AKRTIRV
PhylomeDB:Q9FKT4 ProtClustDB:CLSN2916672 Genevestigator:Q9FKT4
Uniprot:Q9FKT4
Length = 315
Score = 244 (91.0 bits), Expect = 1.0e-20, P = 1.0e-20
Identities = 55/100 (55%), Positives = 70/100 (70%)
Query: 27 IKVEI-KDKPGYEHLNEPLHMLVEAEFPEVIINSCLDHAVAILENLLKPVDESLDHYKKQ 85
IK E+ + KPGYEHLNEPLH+LVEAE P I+++ L A IL++LL P++E+ D YKKQ
Sbjct: 217 IKEEMMRGKPGYEHLNEPLHILVEAELPIEIVDARLMQAREILDDLLTPMEETHDMYKKQ 276
Query: 86 QLRELAILNGTLREEXXXXXXXXXXXXXXFNNAGMKCAET 125
QLRELA+LNGTLREE +N+ GMK A+T
Sbjct: 277 QLRELALLNGTLREEGSPMSGSVSP----YNSLGMKRAKT 312
>TAIR|locus:2077818 [details] [associations]
symbol:AT3G08620 "AT3G08620" species:3702 "Arabidopsis
thaliana" [GO:0003676 "nucleic acid binding" evidence=ISS]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM] [GO:0008150 "biological_process" evidence=ND]
[GO:0010048 "vernalization response" evidence=RCA]
InterPro:IPR004087 InterPro:IPR004088 Pfam:PF00013 PROSITE:PS50084
SMART:SM00322 GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR
GO:GO:0003723 EMBL:AC012562 eggNOG:COG5176 KO:K14945 HSSP:Q32NN2
HOGENOM:HOG000238548 ProtClustDB:CLSN2683215 EMBL:AK117438
IPI:IPI00536963 RefSeq:NP_187474.2 UniGene:At.40250
ProteinModelPortal:Q8GYR4 SMR:Q8GYR4 PaxDb:Q8GYR4 PRIDE:Q8GYR4
EnsemblPlants:AT3G08620.1 GeneID:820009 KEGG:ath:AT3G08620
TAIR:At3g08620 InParanoid:Q9C9Z4 OMA:IFRITGM PhylomeDB:Q8GYR4
Genevestigator:Q8GYR4 Uniprot:Q8GYR4
Length = 283
Score = 224 (83.9 bits), Expect = 1.4e-18, P = 1.4e-18
Identities = 49/98 (50%), Positives = 63/98 (64%)
Query: 30 EIKDKPGYEHLNEPLHMLVEAEFPEVIINSCLDHAVAILENLLKPVDESLDHYKKQQLRE 89
++K KPGYEHLNE LH+L+EA+ P I++ L A I+E L+KPVDES D+ K+QQLRE
Sbjct: 190 KLKGKPGYEHLNEQLHILIEADLPIDIVDIKLRQAQEIIEELVKPVDESQDYIKRQQLRE 249
Query: 90 LAILNGTLREEXXXXXXXXXXXXXXFNNAGMKCAETGR 127
LA+LN LRE FN+ MK +TGR
Sbjct: 250 LALLNSNLRENSPGPSGSVSP----FNSNAMKRPKTGR 283
>TAIR|locus:2064097 [details] [associations]
symbol:AT2G38610 "AT2G38610" species:3702 "Arabidopsis
thaliana" [GO:0003676 "nucleic acid binding" evidence=ISS]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM] [GO:0008150 "biological_process" evidence=ND]
[GO:0005829 "cytosol" evidence=IDA] InterPro:IPR004087
InterPro:IPR004088 Pfam:PF00013 PROSITE:PS50084 SMART:SM00322
GO:GO:0005829 GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0003723 EMBL:AC005499 eggNOG:COG5176 KO:K14945 HSSP:Q32NN2
HOGENOM:HOG000238548 EMBL:AY042804 EMBL:AY064682 EMBL:AY065112
EMBL:BT000084 IPI:IPI00520364 PIR:B84807 RefSeq:NP_181395.1
RefSeq:NP_850296.1 UniGene:At.23456 ProteinModelPortal:Q9ZVI3
SMR:Q9ZVI3 IntAct:Q9ZVI3 PaxDb:Q9ZVI3 PRIDE:Q9ZVI3
EnsemblPlants:AT2G38610.1 EnsemblPlants:AT2G38610.2 GeneID:818443
KEGG:ath:AT2G38610 TAIR:At2g38610 InParanoid:Q9ZVI3 OMA:IMRVSSI
PhylomeDB:Q9ZVI3 ProtClustDB:CLSN2683215 Genevestigator:Q9ZVI3
Uniprot:Q9ZVI3
Length = 286
Score = 208 (78.3 bits), Expect = 6.7e-17, P = 6.7e-17
Identities = 48/98 (48%), Positives = 62/98 (63%)
Query: 30 EIKDKPGYEHLNEPLHMLVEAEFPEVIINSCLDHAVAILENLLKPVDESLDHYKKQQLRE 89
+++ +PGYEHLNE LH+L+EA+ P I+ L A I+E LLKPVDES D K+QQLRE
Sbjct: 191 KLRGRPGYEHLNEQLHILIEADLPASIVEIRLRQAQEIIEELLKPVDESQDFIKRQQLRE 250
Query: 90 LAILNGT-LREEXXXXXXXXXXXXXXFNNAGMKCAETG 126
LA+LN LREE FN++G K +TG
Sbjct: 251 LALLNSNNLREESPGPSGGGSVSP--FNSSG-KRPKTG 285
>TAIR|locus:2176222 [details] [associations]
symbol:AT5G51300 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0008380 "RNA splicing" evidence=NAS] [GO:0000398
"mRNA splicing, via spliceosome" evidence=RCA] InterPro:IPR000504
InterPro:IPR001878 InterPro:IPR004087 InterPro:IPR004088
InterPro:IPR012677 Pfam:PF00013 Pfam:PF00076 PROSITE:PS50084
PROSITE:PS50102 PROSITE:PS50158 SMART:SM00322 SMART:SM00343
SMART:SM00360 EMBL:CP002688 GO:GO:0008380 GO:GO:0000166
GO:GO:0008270 Gene3D:3.30.70.330 GO:GO:0003723 Gene3D:4.10.60.10
SUPFAM:SSF57756 HSSP:Q9BW01 KO:K13095 EMBL:AB023044 OMA:GDGPSHE
EMBL:AY142629 EMBL:AK316802 EMBL:AK317057 IPI:IPI00537668
RefSeq:NP_001032055.1 RefSeq:NP_199943.1 RefSeq:NP_851169.1
UniGene:At.22924 ProteinModelPortal:Q9LU44 SMR:Q9LU44 IntAct:Q9LU44
STRING:Q9LU44 PRIDE:Q9LU44 EnsemblPlants:AT5G51300.1
EnsemblPlants:AT5G51300.2 EnsemblPlants:AT5G51300.3 GeneID:835204
KEGG:ath:AT5G51300 TAIR:At5g51300 InParanoid:Q9LU44
PhylomeDB:Q9LU44 ProtClustDB:CLSN2687224 Genevestigator:Q9LU44
Uniprot:Q9LU44
Length = 804
Score = 154 (59.3 bits), Expect = 6.3e-10, P = 6.3e-10
Identities = 34/60 (56%), Positives = 44/60 (73%)
Query: 41 NEPLHMLVEAEFPEVIINSCLDHAVAILENLLKPVDESLDHYKKQQLRELAILNGTLREE 100
NE LH+LVEAE E L+ A ++E LL+PVDE L+ +K+QQLRELA LNGT+R+E
Sbjct: 306 NEDLHVLVEAETQEA-----LEAAAGMVEKLLQPVDEVLNEHKRQQLRELATLNGTIRDE 360
>UNIPROTKB|F5GXS8 [details] [associations]
symbol:QKI "Protein quaking" species:9606 "Homo sapiens"
[GO:0003723 "RNA binding" evidence=IEA] InterPro:IPR004087
InterPro:IPR004088 Pfam:PF00013 SMART:SM00322 GO:GO:0003723
EMBL:AL356119 EMBL:AL031781 HGNC:HGNC:21100 ChiTaRS:QKI
IPI:IPI01009757 ProteinModelPortal:F5GXS8 SMR:F5GXS8
Ensembl:ENST00000537041 ArrayExpress:F5GXS8 Bgee:F5GXS8
Uniprot:F5GXS8
Length = 160
Score = 140 (54.3 bits), Expect = 1.1e-09, P = 1.1e-09
Identities = 32/68 (47%), Positives = 40/68 (58%)
Query: 32 KDKPGYEHLNEPLHMLVEAEFPEVIINSCLDHAVAILENLLKPVDESLDHYKKQQLRELA 91
+ KP +EHLNE LH+L+ E + L AV ++ LL P E D KK QL ELA
Sbjct: 84 RGKPNWEHLNEDLHVLITVEDAQNRAEIKLKRAVEEVKKLLVPAAEGEDSLKKMQLMELA 143
Query: 92 ILNGTLRE 99
ILNGT R+
Sbjct: 144 ILNGTYRD 151
>UNIPROTKB|F5GYM3 [details] [associations]
symbol:QKI "Protein quaking" species:9606 "Homo sapiens"
[GO:0003723 "RNA binding" evidence=IEA] [GO:0001570
"vasculogenesis" evidence=IEA] [GO:0007286 "spermatid development"
evidence=IEA] [GO:0010628 "positive regulation of gene expression"
evidence=IEA] [GO:0042552 "myelination" evidence=IEA] [GO:0042692
"muscle cell differentiation" evidence=IEA] [GO:0042759 "long-chain
fatty acid biosynthetic process" evidence=IEA] InterPro:IPR004087
InterPro:IPR004088 Pfam:PF00013 SMART:SM00322 GO:GO:0007286
GO:GO:0003723 GO:GO:0042692 GO:GO:0042759 GO:GO:0042552
GO:GO:0010628 GO:GO:0001570 EMBL:AL356119 EMBL:AL031781
HGNC:HGNC:21100 ChiTaRS:QKI IPI:IPI01009310
ProteinModelPortal:F5GYM3 SMR:F5GYM3 Ensembl:ENST00000544823
ArrayExpress:F5GYM3 Bgee:F5GYM3 Uniprot:F5GYM3
Length = 170
Score = 140 (54.3 bits), Expect = 1.1e-09, P = 1.1e-09
Identities = 32/68 (47%), Positives = 40/68 (58%)
Query: 32 KDKPGYEHLNEPLHMLVEAEFPEVIINSCLDHAVAILENLLKPVDESLDHYKKQQLRELA 91
+ KP +EHLNE LH+L+ E + L AV ++ LL P E D KK QL ELA
Sbjct: 84 RGKPNWEHLNEDLHVLITVEDAQNRAEIKLKRAVEEVKKLLVPAAEGEDSLKKMQLMELA 143
Query: 92 ILNGTLRE 99
ILNGT R+
Sbjct: 144 ILNGTYRD 151
>UNIPROTKB|J9NVZ6 [details] [associations]
symbol:QKI "Protein quaking" species:9615 "Canis lupus
familiaris" [GO:0003723 "RNA binding" evidence=IEA]
InterPro:IPR004087 InterPro:IPR004088 Pfam:PF00013 SMART:SM00322
GO:GO:0003723 GeneTree:ENSGT00550000074434 EMBL:AAEX03000337
EMBL:AAEX03000338 Ensembl:ENSCAFT00000045317 Uniprot:J9NVZ6
Length = 286
Score = 140 (54.3 bits), Expect = 3.1e-09, P = 3.1e-09
Identities = 32/68 (47%), Positives = 40/68 (58%)
Query: 32 KDKPGYEHLNEPLHMLVEAEFPEVIINSCLDHAVAILENLLKPVDESLDHYKKQQLRELA 91
+ KP +EHLNE LH+L+ E + L AV ++ LL P E D KK QL ELA
Sbjct: 84 RGKPNWEHLNEDLHVLITVEDAQNRAEIKLKRAVEEVKKLLVPAAEGEDSLKKMQLMELA 143
Query: 92 ILNGTLRE 99
ILNGT R+
Sbjct: 144 ILNGTYRD 151
>UNIPROTKB|F1PLY2 [details] [associations]
symbol:QKI "Protein quaking" species:9615 "Canis lupus
familiaris" [GO:0003723 "RNA binding" evidence=IEA]
InterPro:IPR004087 InterPro:IPR004088 Pfam:PF00013 SMART:SM00322
GO:GO:0003723 GeneTree:ENSGT00550000074434 EMBL:AAEX03000337
EMBL:AAEX03000338 Ensembl:ENSCAFT00000001203 Uniprot:F1PLY2
Length = 310
Score = 140 (54.3 bits), Expect = 3.9e-09, P = 3.9e-09
Identities = 32/68 (47%), Positives = 40/68 (58%)
Query: 32 KDKPGYEHLNEPLHMLVEAEFPEVIINSCLDHAVAILENLLKPVDESLDHYKKQQLRELA 91
+ KP +EHLNE LH+L+ E + L AV ++ LL P E D KK QL ELA
Sbjct: 113 RGKPNWEHLNEDLHVLITVEDAQNRAEIKLKRAVEEVKKLLVPAAEGEDSLKKMQLMELA 172
Query: 92 ILNGTLRE 99
ILNGT R+
Sbjct: 173 ILNGTYRD 180
>UNIPROTKB|F1SBW4 [details] [associations]
symbol:QKI "Protein quaking" species:9823 "Sus scrofa"
[GO:0042759 "long-chain fatty acid biosynthetic process"
evidence=IEA] [GO:0042692 "muscle cell differentiation"
evidence=IEA] [GO:0042552 "myelination" evidence=IEA] [GO:0010628
"positive regulation of gene expression" evidence=IEA] [GO:0007286
"spermatid development" evidence=IEA] [GO:0001570 "vasculogenesis"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
InterPro:IPR004087 InterPro:IPR004088 Pfam:PF00013 SMART:SM00322
GO:GO:0005886 GO:GO:0005634 GO:GO:0007286 GO:GO:0003723
GO:GO:0042692 GO:GO:0042759 GO:GO:0042552 GO:GO:0010628
GO:GO:0001570 GeneTree:ENSGT00550000074434 OMA:CLTHLKF
EMBL:AEMK01188940 EMBL:CU062434 EMBL:CU074317
Ensembl:ENSSSCT00000004455 Uniprot:F1SBW4
Length = 311
Score = 140 (54.3 bits), Expect = 3.9e-09, P = 3.9e-09
Identities = 32/68 (47%), Positives = 40/68 (58%)
Query: 32 KDKPGYEHLNEPLHMLVEAEFPEVIINSCLDHAVAILENLLKPVDESLDHYKKQQLRELA 91
+ KP +EHLNE LH+L+ E + L AV ++ LL P E D KK QL ELA
Sbjct: 114 RGKPNWEHLNEDLHVLITVEDAQNRAEIKLKRAVEEVKKLLVPAAEGEDSLKKMQLMELA 173
Query: 92 ILNGTLRE 99
ILNGT R+
Sbjct: 174 ILNGTYRD 181
>UNIPROTKB|F1N7N1 [details] [associations]
symbol:QKI "Protein quaking" species:9913 "Bos taurus"
[GO:0042759 "long-chain fatty acid biosynthetic process"
evidence=IEA] [GO:0042692 "muscle cell differentiation"
evidence=IEA] [GO:0042552 "myelination" evidence=IEA] [GO:0010628
"positive regulation of gene expression" evidence=IEA] [GO:0007286
"spermatid development" evidence=IEA] [GO:0001570 "vasculogenesis"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
InterPro:IPR004087 InterPro:IPR004088 Pfam:PF00013 SMART:SM00322
GO:GO:0005886 GO:GO:0005634 GO:GO:0007286 GO:GO:0003723
GO:GO:0042692 GO:GO:0042759 GO:GO:0042552 GO:GO:0010628
GO:GO:0001570 GeneTree:ENSGT00550000074434 IPI:IPI00690241
EMBL:DAAA02027443 EMBL:DAAA02027444 EMBL:DAAA02027445
EMBL:DAAA02027446 EMBL:DAAA02027447 Ensembl:ENSBTAT00000054202
OMA:CLTHLKF Uniprot:F1N7N1
Length = 315
Score = 140 (54.3 bits), Expect = 4.0e-09, P = 4.0e-09
Identities = 32/68 (47%), Positives = 40/68 (58%)
Query: 32 KDKPGYEHLNEPLHMLVEAEFPEVIINSCLDHAVAILENLLKPVDESLDHYKKQQLRELA 91
+ KP +EHLNE LH+L+ E + L AV ++ LL P E D KK QL ELA
Sbjct: 113 RGKPNWEHLNEDLHVLITVEDAQNRAEIKLKRAVEEVKKLLVPAAEGEDSLKKMQLMELA 172
Query: 92 ILNGTLRE 99
ILNGT R+
Sbjct: 173 ILNGTYRD 180
>ZFIN|ZDB-GENE-040426-1462 [details] [associations]
symbol:qki2 "QKI, KH domain containing, RNA
binding 2" species:7955 "Danio rerio" [GO:0003723 "RNA binding"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0006810
"transport" evidence=IEA] [GO:0017124 "SH3 domain binding"
evidence=IEA] [GO:0051028 "mRNA transport" evidence=IEA]
[GO:0006397 "mRNA processing" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0030154
"cell differentiation" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0006417 "regulation of translation" evidence=IEA]
[GO:0008380 "RNA splicing" evidence=IEA] InterPro:IPR004087
InterPro:IPR004088 Pfam:PF00013 PROSITE:PS50084 SMART:SM00322
ZFIN:ZDB-GENE-040426-1462 GO:GO:0007275 GO:GO:0005634 GO:GO:0005737
GO:GO:0030154 GO:GO:0006417 GO:GO:0008380 GO:GO:0006397
GO:GO:0003723 GO:GO:0051028 eggNOG:COG5176
GeneTree:ENSGT00550000074434 KO:K14945 EMBL:AB086654 EMBL:BC061709
EMBL:BC065344 IPI:IPI00501345 IPI:IPI00760231 RefSeq:NP_957136.2
UniGene:Dr.133657 ProteinModelPortal:Q6P104 SMR:Q6P104
Ensembl:ENSDART00000027034 GeneID:393815 KEGG:dre:393815 CTD:393815
HOGENOM:HOG000019831 HOVERGEN:HBG093883 OMA:GMAFPTK
OrthoDB:EOG4RFKSZ NextBio:20814805 Bgee:Q6P104 Uniprot:Q6P104
Length = 319
Score = 140 (54.3 bits), Expect = 4.2e-09, P = 4.2e-09
Identities = 32/68 (47%), Positives = 40/68 (58%)
Query: 32 KDKPGYEHLNEPLHMLVEAEFPEVIINSCLDHAVAILENLLKPVDESLDHYKKQQLRELA 91
+ KP +EHLNE LH+L+ E + L AV ++ LL P E D KK QL ELA
Sbjct: 139 RGKPNWEHLNEDLHVLITVEDSQNRAEIKLKRAVEEVKKLLVPAAEGEDSLKKMQLMELA 198
Query: 92 ILNGTLRE 99
ILNGT R+
Sbjct: 199 ILNGTYRD 206
>UNIPROTKB|D4A2X0 [details] [associations]
symbol:Qk "Protein Qk" species:10116 "Rattus norvegicus"
[GO:0003723 "RNA binding" evidence=IEA] InterPro:IPR004087
InterPro:IPR004088 Pfam:PF00013 SMART:SM00322 RGD:1584886
GO:GO:0003723 IPI:IPI00213936 PRIDE:D4A2X0
Ensembl:ENSRNOT00000023290 ArrayExpress:D4A2X0 Uniprot:D4A2X0
Length = 338
Score = 140 (54.3 bits), Expect = 4.8e-09, P = 4.8e-09
Identities = 32/68 (47%), Positives = 40/68 (58%)
Query: 32 KDKPGYEHLNEPLHMLVEAEFPEVIINSCLDHAVAILENLLKPVDESLDHYKKQQLRELA 91
+ KP +EHLNE LH+L+ E + L AV ++ LL P E D KK QL ELA
Sbjct: 139 RGKPNWEHLNEDLHVLITVEDAQNRAEIKLKRAVEEVKKLLVPAAEGEDSLKKMQLMELA 198
Query: 92 ILNGTLRE 99
ILNGT R+
Sbjct: 199 ILNGTYRD 206
>UNIPROTKB|F1PX61 [details] [associations]
symbol:QKI "Protein quaking" species:9615 "Canis lupus
familiaris" [GO:0003723 "RNA binding" evidence=IEA]
InterPro:IPR004087 InterPro:IPR004088 Pfam:PF00013 SMART:SM00322
GO:GO:0003723 GeneTree:ENSGT00550000074434 OMA:CLTHLKF
EMBL:AAEX03000337 EMBL:AAEX03000338 Ensembl:ENSCAFT00000035144
Uniprot:F1PX61
Length = 339
Score = 140 (54.3 bits), Expect = 4.8e-09, P = 4.8e-09
Identities = 32/68 (47%), Positives = 40/68 (58%)
Query: 32 KDKPGYEHLNEPLHMLVEAEFPEVIINSCLDHAVAILENLLKPVDESLDHYKKQQLRELA 91
+ KP +EHLNE LH+L+ E + L AV ++ LL P E D KK QL ELA
Sbjct: 142 RGKPNWEHLNEDLHVLITVEDAQNRAEIKLKRAVEEVKKLLVPAAEGEDSLKKMQLMELA 201
Query: 92 ILNGTLRE 99
ILNGT R+
Sbjct: 202 ILNGTYRD 209
>UNIPROTKB|Q5W9D7 [details] [associations]
symbol:QKI "Protein quaking" species:9913 "Bos taurus"
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0051028 "mRNA transport" evidence=IEA]
[GO:0030154 "cell differentiation" evidence=IEA] [GO:0017124 "SH3
domain binding" evidence=IEA] [GO:0008380 "RNA splicing"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0006417 "regulation of translation" evidence=IEA]
[GO:0006397 "mRNA processing" evidence=IEA] [GO:0003723 "RNA
binding" evidence=IEA] InterPro:IPR004087 InterPro:IPR004088
Pfam:PF00013 PROSITE:PS50084 SMART:SM00322 GO:GO:0007275
GO:GO:0005634 GO:GO:0005737 GO:GO:0030154 GO:GO:0006417
GO:GO:0008380 GO:GO:0006397 GO:GO:0003723 GO:GO:0051028
eggNOG:COG5176 KO:K14945 HOGENOM:HOG000019831 HOVERGEN:HBG093883
EMBL:AB177986 IPI:IPI00690241 RefSeq:NP_001007818.1
UniGene:Bt.91293 ProteinModelPortal:Q5W9D7 SMR:Q5W9D7 STRING:Q5W9D7
PRIDE:Q5W9D7 GeneID:493722 KEGG:bta:493722 CTD:9444
NextBio:20865466 Uniprot:Q5W9D7
Length = 341
Score = 140 (54.3 bits), Expect = 4.9e-09, P = 4.9e-09
Identities = 32/68 (47%), Positives = 40/68 (58%)
Query: 32 KDKPGYEHLNEPLHMLVEAEFPEVIINSCLDHAVAILENLLKPVDESLDHYKKQQLRELA 91
+ KP +EHLNE LH+L+ E + L AV ++ LL P E D KK QL ELA
Sbjct: 139 RGKPNWEHLNEDLHVLITVEDAQNRAEIKLKRAVEEVKKLLVPAAEGEDSLKKMQLMELA 198
Query: 92 ILNGTLRE 99
ILNGT R+
Sbjct: 199 ILNGTYRD 206
>UNIPROTKB|Q9GMY1 [details] [associations]
symbol:QKI "Protein quaking" species:9615 "Canis lupus
familiaris" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0051028 "mRNA transport" evidence=IEA]
[GO:0030154 "cell differentiation" evidence=IEA] [GO:0017124 "SH3
domain binding" evidence=IEA] [GO:0008380 "RNA splicing"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0006417 "regulation of translation" evidence=IEA]
[GO:0006397 "mRNA processing" evidence=IEA] [GO:0003723 "RNA
binding" evidence=IEA] InterPro:IPR004087 InterPro:IPR004088
Pfam:PF00013 PROSITE:PS50084 SMART:SM00322 GO:GO:0007275
GO:GO:0005634 GO:GO:0005737 GO:GO:0030154 GO:GO:0006417
GO:GO:0008380 GO:GO:0006397 GO:GO:0003723 GO:GO:0051028
eggNOG:COG5176 KO:K14945 HOGENOM:HOG000019831 HOVERGEN:HBG093883
CTD:9444 EMBL:AB047312 RefSeq:NP_001003021.1 UniGene:Cfa.57
ProteinModelPortal:Q9GMY1 SMR:Q9GMY1 PRIDE:Q9GMY1 GeneID:606754
KEGG:cfa:606754 NextBio:20892526 Uniprot:Q9GMY1
Length = 341
Score = 140 (54.3 bits), Expect = 4.9e-09, P = 4.9e-09
Identities = 32/68 (47%), Positives = 40/68 (58%)
Query: 32 KDKPGYEHLNEPLHMLVEAEFPEVIINSCLDHAVAILENLLKPVDESLDHYKKQQLRELA 91
+ KP +EHLNE LH+L+ E + L AV ++ LL P E D KK QL ELA
Sbjct: 139 RGKPNWEHLNEDLHVLITVEDAQNRAEIKLKRAVEEVKKLLVPAAEGEDSLKKMQLMELA 198
Query: 92 ILNGTLRE 99
ILNGT R+
Sbjct: 199 ILNGTYRD 206
>UNIPROTKB|Q96PU8 [details] [associations]
symbol:QKI "Protein quaking" species:9606 "Homo sapiens"
[GO:0003723 "RNA binding" evidence=IEA] [GO:0006397 "mRNA
processing" evidence=IEA] [GO:0006417 "regulation of translation"
evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA] [GO:0017124
"SH3 domain binding" evidence=IEA] [GO:0051028 "mRNA transport"
evidence=IEA] [GO:0001570 "vasculogenesis" evidence=IEA]
[GO:0007286 "spermatid development" evidence=IEA] [GO:0010628
"positive regulation of gene expression" evidence=IEA] [GO:0042552
"myelination" evidence=IEA] [GO:0042692 "muscle cell
differentiation" evidence=IEA] [GO:0042759 "long-chain fatty acid
biosynthetic process" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005515
"protein binding" evidence=IPI] InterPro:IPR004087
InterPro:IPR004088 Pfam:PF00013 PROSITE:PS50084 SMART:SM00322
GO:GO:0005634 GO:GO:0005737 GO:GO:0006417 GO:GO:0008380
GO:GO:0007286 GO:GO:0006397 GO:GO:0003723 GO:GO:0042692
GO:GO:0042759 GO:GO:0042552 GO:GO:0010628 GO:GO:0001570
GO:GO:0051028 eggNOG:COG5176 KO:K14945 HOVERGEN:HBG093883
OMA:GMAFPTK OrthoDB:EOG4RFKSZ CTD:9444 EMBL:AB067798 EMBL:AB067799
EMBL:AB067800 EMBL:AB067801 EMBL:AB067808 EMBL:AF142417
EMBL:AF142418 EMBL:AF142419 EMBL:AF142420 EMBL:AF142421
EMBL:AF142422 EMBL:AY780788 EMBL:DQ323998 EMBL:AL356119
EMBL:AL031781 EMBL:BC012222 EMBL:BC019917 EMBL:AK027309
IPI:IPI00385562 IPI:IPI00514277 IPI:IPI00736672 IPI:IPI00749287
IPI:IPI00759828 IPI:IPI00942653 RefSeq:NP_006766.1
RefSeq:NP_996735.1 RefSeq:NP_996736.1 RefSeq:NP_996737.1
UniGene:Hs.510324 ProteinModelPortal:Q96PU8 SMR:Q96PU8
IntAct:Q96PU8 MINT:MINT-1445480 STRING:Q96PU8 PhosphoSite:Q96PU8
DMDM:74761039 PaxDb:Q96PU8 PRIDE:Q96PU8 DNASU:9444
Ensembl:ENST00000275262 Ensembl:ENST00000361195
Ensembl:ENST00000361752 Ensembl:ENST00000361758
Ensembl:ENST00000392127 Ensembl:ENST00000424802
Ensembl:ENST00000453779 GeneID:9444 KEGG:hsa:9444 UCSC:uc003que.3
UCSC:uc003quf.3 UCSC:uc003qug.3 UCSC:uc003quh.3 UCSC:uc003qui.3
UCSC:uc003quj.3 GeneCards:GC06P163835 HGNC:HGNC:21100 HPA:CAB022602
HPA:HPA019123 MIM:609590 neXtProt:NX_Q96PU8 PharmGKB:PA134912180
InParanoid:Q96PU8 ChiTaRS:QKI GenomeRNAi:9444 NextBio:35368
ArrayExpress:Q96PU8 Bgee:Q96PU8 Genevestigator:Q96PU8
GermOnline:ENSG00000112531 Uniprot:Q96PU8
Length = 341
Score = 140 (54.3 bits), Expect = 4.9e-09, P = 4.9e-09
Identities = 32/68 (47%), Positives = 40/68 (58%)
Query: 32 KDKPGYEHLNEPLHMLVEAEFPEVIINSCLDHAVAILENLLKPVDESLDHYKKQQLRELA 91
+ KP +EHLNE LH+L+ E + L AV ++ LL P E D KK QL ELA
Sbjct: 139 RGKPNWEHLNEDLHVLITVEDAQNRAEIKLKRAVEEVKKLLVPAAEGEDSLKKMQLMELA 198
Query: 92 ILNGTLRE 99
ILNGT R+
Sbjct: 199 ILNGTYRD 206
>UNIPROTKB|Q5W9D5 [details] [associations]
symbol:QKI "Protein quaking" species:9823 "Sus scrofa"
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0051028 "mRNA transport" evidence=IEA]
[GO:0030154 "cell differentiation" evidence=IEA] [GO:0017124 "SH3
domain binding" evidence=IEA] [GO:0008380 "RNA splicing"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0006417 "regulation of translation" evidence=IEA]
[GO:0006397 "mRNA processing" evidence=IEA] [GO:0003723 "RNA
binding" evidence=IEA] InterPro:IPR004087 InterPro:IPR004088
Pfam:PF00013 PROSITE:PS50084 SMART:SM00322 GO:GO:0007275
GO:GO:0005634 GO:GO:0005737 GO:GO:0030154 GO:GO:0006417
GO:GO:0008380 GO:GO:0006397 GO:GO:0003723 GO:GO:0051028
eggNOG:COG5176 KO:K14945 HOGENOM:HOG000019831 HOVERGEN:HBG093883
OrthoDB:EOG4RFKSZ CTD:9444 EMBL:AB177988 RefSeq:NP_001007196.1
UniGene:Ssc.7659 ProteinModelPortal:Q5W9D5 SMR:Q5W9D5 PRIDE:Q5W9D5
GeneID:492277 KEGG:ssc:492277 Uniprot:Q5W9D5
Length = 341
Score = 140 (54.3 bits), Expect = 4.9e-09, P = 4.9e-09
Identities = 32/68 (47%), Positives = 40/68 (58%)
Query: 32 KDKPGYEHLNEPLHMLVEAEFPEVIINSCLDHAVAILENLLKPVDESLDHYKKQQLRELA 91
+ KP +EHLNE LH+L+ E + L AV ++ LL P E D KK QL ELA
Sbjct: 139 RGKPNWEHLNEDLHVLITVEDAQNRAEIKLKRAVEEVKKLLVPAAEGEDSLKKMQLMELA 198
Query: 92 ILNGTLRE 99
ILNGT R+
Sbjct: 199 ILNGTYRD 206
>MGI|MGI:97837 [details] [associations]
symbol:Qk "quaking" species:10090 "Mus musculus" [GO:0001570
"vasculogenesis" evidence=IMP] [GO:0003723 "RNA binding"
evidence=TAS] [GO:0005634 "nucleus" evidence=TAS] [GO:0005737
"cytoplasm" evidence=TAS] [GO:0006397 "mRNA processing"
evidence=IEA] [GO:0006417 "regulation of translation" evidence=IEA]
[GO:0006810 "transport" evidence=IEA] [GO:0007275 "multicellular
organismal development" evidence=IEA] [GO:0007286 "spermatid
development" evidence=IGI] [GO:0008366 "axon ensheathment"
evidence=IMP] [GO:0008380 "RNA splicing" evidence=IEA] [GO:0010628
"positive regulation of gene expression" evidence=IMP] [GO:0017124
"SH3 domain binding" evidence=IEA] [GO:0030154 "cell
differentiation" evidence=IEA] [GO:0042552 "myelination"
evidence=IMP] [GO:0042692 "muscle cell differentiation"
evidence=IMP] [GO:0042759 "long-chain fatty acid biosynthetic
process" evidence=IMP] [GO:0051028 "mRNA transport" evidence=IEA]
InterPro:IPR004087 InterPro:IPR004088 Pfam:PF00013 PROSITE:PS50084
SMART:SM00322 MGI:MGI:97837 GO:GO:0005886 GO:GO:0005634
GO:GO:0005737 GO:GO:0006417 GO:GO:0008380 GO:GO:0007286
GO:GO:0006397 GO:GO:0003723 GO:GO:0042692 GO:GO:0042759
GO:GO:0042552 GO:GO:0010628 GO:GO:0001570 GO:GO:0051028
eggNOG:COG5176 GeneTree:ENSGT00550000074434 KO:K14945
HOVERGEN:HBG093883 OMA:GMAFPTK OrthoDB:EOG4RFKSZ EMBL:U44940
EMBL:AF090402 EMBL:AF090403 EMBL:AF090404 EMBL:AF091047
EMBL:AF090401 EMBL:AF090392 EMBL:AF090393 EMBL:AF090394
EMBL:AF090395 EMBL:AF090396 EMBL:AF090397 EMBL:AF090400
EMBL:AF467890 EMBL:AK005169 EMBL:AK132303 EMBL:BC053426
EMBL:BC056346 EMBL:AJ012812 EMBL:AJ012813 EMBL:AJ012814
EMBL:AJ012816 EMBL:AJ012817 EMBL:AJ012815 EMBL:AJ012818
EMBL:AJ012820 EMBL:AJ012819 IPI:IPI00130483 IPI:IPI00136596
IPI:IPI00759871 IPI:IPI00759885 IPI:IPI00759892 IPI:IPI00759906
IPI:IPI00759949 IPI:IPI00760097 RefSeq:NP_001152988.1
RefSeq:NP_001152989.1 RefSeq:NP_068681.1 UniGene:Mm.130694
UniGene:Mm.384135 UniGene:Mm.393248 PDB:4DNN PDBsum:4DNN
ProteinModelPortal:Q9QYS9 SMR:Q9QYS9 STRING:Q9QYS9
PhosphoSite:Q9QYS9 PaxDb:Q9QYS9 PRIDE:Q9QYS9
Ensembl:ENSMUST00000042296 Ensembl:ENSMUST00000097414 GeneID:19317
KEGG:mmu:19317 UCSC:uc008akb.2 UCSC:uc008ake.2 UCSC:uc012ajv.1
CTD:19317 InParanoid:Q9QYS9 NextBio:296279 Bgee:Q9QYS9
CleanEx:MM_QK Genevestigator:Q9QYS9 GermOnline:ENSMUSG00000062078
Uniprot:Q9QYS9
Length = 341
Score = 140 (54.3 bits), Expect = 4.9e-09, P = 4.9e-09
Identities = 32/68 (47%), Positives = 40/68 (58%)
Query: 32 KDKPGYEHLNEPLHMLVEAEFPEVIINSCLDHAVAILENLLKPVDESLDHYKKQQLRELA 91
+ KP +EHLNE LH+L+ E + L AV ++ LL P E D KK QL ELA
Sbjct: 139 RGKPNWEHLNEDLHVLITVEDAQNRAEIKLKRAVEEVKKLLVPAAEGEDSLKKMQLMELA 198
Query: 92 ILNGTLRE 99
ILNGT R+
Sbjct: 199 ILNGTYRD 206
>RGD|1584886 [details] [associations]
symbol:Qk "quaking" species:10116 "Rattus norvegicus"
[GO:0001570 "vasculogenesis" evidence=ISO] [GO:0003723 "RNA
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0006397 "mRNA processing"
evidence=IEA] [GO:0006417 "regulation of translation" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=IEA]
[GO:0007286 "spermatid development" evidence=ISO] [GO:0008366 "axon
ensheathment" evidence=ISO] [GO:0008380 "RNA splicing"
evidence=IEA] [GO:0010628 "positive regulation of gene expression"
evidence=ISO] [GO:0017124 "SH3 domain binding" evidence=IEA]
[GO:0030154 "cell differentiation" evidence=IEA] [GO:0042552
"myelination" evidence=ISO] [GO:0042692 "muscle cell
differentiation" evidence=ISO] [GO:0042759 "long-chain fatty acid
biosynthetic process" evidence=ISO] [GO:0051028 "mRNA transport"
evidence=IEA] InterPro:IPR004087 InterPro:IPR004088 Pfam:PF00013
PROSITE:PS50084 SMART:SM00322 GO:GO:0005886 GO:GO:0005634
GO:GO:0005737 GO:GO:0006417 GO:GO:0008380 GO:GO:0007286
GO:GO:0006397 GO:GO:0003723 GO:GO:0042692 GO:GO:0042759
GO:GO:0042552 GO:GO:0010628 GO:GO:0001570 GO:GO:0051028
eggNOG:COG5176 HOGENOM:HOG000019831 HOVERGEN:HBG093883 OMA:GMAFPTK
OrthoDB:EOG4RFKSZ EMBL:AABR03000138 EMBL:AB054997 IPI:IPI00394474
UniGene:Rn.228876 ProteinModelPortal:Q91XU1 SMR:Q91XU1
STRING:Q91XU1 PhosphoSite:Q91XU1 RGD:628653 InParanoid:Q91XU1
ArrayExpress:Q91XU1 Genevestigator:Q91XU1
GermOnline:ENSRNOG00000017174 Uniprot:Q91XU1
Length = 341
Score = 140 (54.3 bits), Expect = 4.9e-09, P = 4.9e-09
Identities = 32/68 (47%), Positives = 40/68 (58%)
Query: 32 KDKPGYEHLNEPLHMLVEAEFPEVIINSCLDHAVAILENLLKPVDESLDHYKKQQLRELA 91
+ KP +EHLNE LH+L+ E + L AV ++ LL P E D KK QL ELA
Sbjct: 139 RGKPNWEHLNEDLHVLITVEDAQNRAEIKLKRAVEEVKKLLVPAAEGEDSLKKMQLMELA 198
Query: 92 ILNGTLRE 99
ILNGT R+
Sbjct: 199 ILNGTYRD 206
>UNIPROTKB|F1LMH5 [details] [associations]
symbol:Qk "Protein Qk" species:10116 "Rattus norvegicus"
[GO:0001570 "vasculogenesis" evidence=IEA] [GO:0003723 "RNA
binding" evidence=IEA] [GO:0007286 "spermatid development"
evidence=IEA] [GO:0010628 "positive regulation of gene expression"
evidence=IEA] [GO:0042552 "myelination" evidence=IEA] [GO:0042692
"muscle cell differentiation" evidence=IEA] [GO:0042759 "long-chain
fatty acid biosynthetic process" evidence=IEA] InterPro:IPR004087
InterPro:IPR004088 Pfam:PF00013 SMART:SM00322 RGD:1584886
GO:GO:0005886 GO:GO:0005634 GO:GO:0007286 GO:GO:0003723
GO:GO:0042692 GO:GO:0042759 GO:GO:0042552 GO:GO:0010628
GO:GO:0001570 IPI:IPI01016326 Ensembl:ENSRNOT00000035402
ArrayExpress:F1LMH5 Uniprot:F1LMH5
Length = 341
Score = 140 (54.3 bits), Expect = 4.9e-09, P = 4.9e-09
Identities = 32/68 (47%), Positives = 40/68 (58%)
Query: 32 KDKPGYEHLNEPLHMLVEAEFPEVIINSCLDHAVAILENLLKPVDESLDHYKKQQLRELA 91
+ KP +EHLNE LH+L+ E + L AV ++ LL P E D KK QL ELA
Sbjct: 139 RGKPNWEHLNEDLHVLITVEDAQNRAEIKLKRAVEEVKKLLVPAAEGEDSLKKMQLMELA 198
Query: 92 ILNGTLRE 99
ILNGT R+
Sbjct: 199 ILNGTYRD 206
>ZFIN|ZDB-GENE-990415-230 [details] [associations]
symbol:qkia "QKI, KH domain containing, RNA binding
a" species:7955 "Danio rerio" [GO:0003723 "RNA binding"
evidence=IEA] [GO:0008589 "regulation of smoothened signaling
pathway" evidence=IMP] [GO:0007519 "skeletal muscle tissue
development" evidence=IMP] [GO:0070935 "3'-UTR-mediated mRNA
stabilization" evidence=IGI] [GO:0017124 "SH3 domain binding"
evidence=IEA] [GO:0051028 "mRNA transport" evidence=IEA]
[GO:0006397 "mRNA processing" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0030154
"cell differentiation" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0006417 "regulation of translation" evidence=IEA]
[GO:0008380 "RNA splicing" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0006810 "transport" evidence=IEA]
InterPro:IPR004087 InterPro:IPR004088 Pfam:PF00013 SMART:SM00322
ZFIN:ZDB-GENE-990415-230 GO:GO:0003723 GeneTree:ENSGT00550000074434
GO:GO:0008589 GO:GO:0007519 GO:GO:0070935 EMBL:BX936408
EMBL:BX936463 IPI:IPI00993157 Ensembl:ENSDART00000125640
ArrayExpress:F1R190 Bgee:F1R190 Uniprot:F1R190
Length = 486
Score = 142 (55.0 bits), Expect = 5.8e-09, P = 5.8e-09
Identities = 31/68 (45%), Positives = 41/68 (60%)
Query: 32 KDKPGYEHLNEPLHMLVEAEFPEVIINSCLDHAVAILENLLKPVDESLDHYKKQQLRELA 91
+ KP +EHLNE LH+L+ E + + AV ++ LL P E D+ KK QL ELA
Sbjct: 243 RGKPNWEHLNEDLHVLITVEDTQTRAEIKMRRAVEEVKKLLVPAAEGEDNLKKMQLMELA 302
Query: 92 ILNGTLRE 99
ILNGT R+
Sbjct: 303 ILNGTYRD 310
>UNIPROTKB|F1NWU9 [details] [associations]
symbol:QKI "Protein quaking" species:9031 "Gallus gallus"
[GO:0003723 "RNA binding" evidence=IEA] InterPro:IPR004087
InterPro:IPR004088 Pfam:PF00013 SMART:SM00322 GO:GO:0003723
GeneTree:ENSGT00550000074434 IPI:IPI00682938 EMBL:AADN02035543
EMBL:AADN02035544 Ensembl:ENSGALT00000018845 ArrayExpress:F1NWU9
Uniprot:F1NWU9
Length = 334
Score = 139 (54.0 bits), Expect = 6.0e-09, P = 6.0e-09
Identities = 32/68 (47%), Positives = 40/68 (58%)
Query: 32 KDKPGYEHLNEPLHMLVEAEFPEVIINSCLDHAVAILENLLKPVDESLDHYKKQQLRELA 91
+ KP +EHLNE LH+L+ E + L AV ++ LL P E D KK QL ELA
Sbjct: 139 RGKPNWEHLNEDLHVLITVEDAQNRAEIKLKRAVEEVKKLLIPAAEGEDSLKKMQLMELA 198
Query: 92 ILNGTLRE 99
ILNGT R+
Sbjct: 199 ILNGTYRD 206
>UNIPROTKB|F1NWV0 [details] [associations]
symbol:QKI "Protein quaking" species:9031 "Gallus gallus"
[GO:0003723 "RNA binding" evidence=IEA] [GO:0001570
"vasculogenesis" evidence=IEA] [GO:0007286 "spermatid development"
evidence=IEA] [GO:0010628 "positive regulation of gene expression"
evidence=IEA] [GO:0042552 "myelination" evidence=IEA] [GO:0042692
"muscle cell differentiation" evidence=IEA] [GO:0042759 "long-chain
fatty acid biosynthetic process" evidence=IEA] InterPro:IPR004087
InterPro:IPR004088 Pfam:PF00013 SMART:SM00322 GO:GO:0005886
GO:GO:0005634 GO:GO:0003723 GO:GO:0042759 GO:GO:0010628
GeneTree:ENSGT00550000074434 OMA:GMAFPTK IPI:IPI00760364
EMBL:AADN02035543 EMBL:AADN02035544 Ensembl:ENSGALT00000018844
ArrayExpress:F1NWV0 Uniprot:F1NWV0
Length = 340
Score = 139 (54.0 bits), Expect = 6.2e-09, P = 6.2e-09
Identities = 32/68 (47%), Positives = 40/68 (58%)
Query: 32 KDKPGYEHLNEPLHMLVEAEFPEVIINSCLDHAVAILENLLKPVDESLDHYKKQQLRELA 91
+ KP +EHLNE LH+L+ E + L AV ++ LL P E D KK QL ELA
Sbjct: 139 RGKPNWEHLNEDLHVLITVEDAQNRAEIKLKRAVEEVKKLLIPAAEGEDSLKKMQLMELA 198
Query: 92 ILNGTLRE 99
ILNGT R+
Sbjct: 199 ILNGTYRD 206
>UNIPROTKB|Q9YH18 [details] [associations]
symbol:QKI "Protein quaking" species:9031 "Gallus gallus"
[GO:0003723 "RNA binding" evidence=IEA] [GO:0006397 "mRNA
processing" evidence=IEA] [GO:0006417 "regulation of translation"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA] [GO:0017124
"SH3 domain binding" evidence=IEA] [GO:0030154 "cell
differentiation" evidence=IEA] [GO:0051028 "mRNA transport"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR004087 InterPro:IPR004088
Pfam:PF00013 PROSITE:PS50084 SMART:SM00322 GO:GO:0007275
GO:GO:0005634 GO:GO:0005737 GO:GO:0030154 GO:GO:0006417
GO:GO:0008380 GO:GO:0006397 GO:GO:0003723 GO:GO:0051028
eggNOG:COG5176 KO:K14945 HOGENOM:HOG000019831 HOVERGEN:HBG093883
CTD:9444 EMBL:U86764 EMBL:U86765 EMBL:U86766 EMBL:U86767
IPI:IPI00582039 IPI:IPI00595503 IPI:IPI00682938 IPI:IPI00760364
RefSeq:NP_989641.2 UniGene:Gga.3168 ProteinModelPortal:Q9YH18
SMR:Q9YH18 STRING:Q9YH18 GeneID:374204 KEGG:gga:374204
InParanoid:Q9YH18 NextBio:20813708 Uniprot:Q9YH18
Length = 340
Score = 139 (54.0 bits), Expect = 6.2e-09, P = 6.2e-09
Identities = 32/68 (47%), Positives = 40/68 (58%)
Query: 32 KDKPGYEHLNEPLHMLVEAEFPEVIINSCLDHAVAILENLLKPVDESLDHYKKQQLRELA 91
+ KP +EHLNE LH+L+ E + L AV ++ LL P E D KK QL ELA
Sbjct: 139 RGKPNWEHLNEDLHVLITVEDAQNRAEIKLKRAVEEVKKLLIPAAEGEDSLKKMQLMELA 198
Query: 92 ILNGTLRE 99
ILNGT R+
Sbjct: 199 ILNGTYRD 206
>ZFIN|ZDB-GENE-081028-54 [details] [associations]
symbol:qkib "QKI, KH domain containing, RNA binding
b" species:7955 "Danio rerio" [GO:0003723 "RNA binding"
evidence=IEA] InterPro:IPR004087 InterPro:IPR004088 Pfam:PF00013
SMART:SM00322 ZFIN:ZDB-GENE-081028-54 GO:GO:0003723
GeneTree:ENSGT00550000074434 EMBL:CABZ01010714 EMBL:CABZ01010715
EMBL:CU019624 EMBL:CU467873 EMBL:CU915796 EMBL:FP325125
IPI:IPI00898626 Ensembl:ENSDART00000018737 Uniprot:F1QTT6
Length = 345
Score = 139 (54.0 bits), Expect = 6.4e-09, P = 6.4e-09
Identities = 32/68 (47%), Positives = 39/68 (57%)
Query: 32 KDKPGYEHLNEPLHMLVEAEFPEVIINSCLDHAVAILENLLKPVDESLDHYKKQQLRELA 91
+ KP +EHLNE LH+L+ E + L AV + LL P E D KK QL ELA
Sbjct: 139 RGKPNWEHLNEDLHVLITVEDAQNRAEIKLKRAVEEVNKLLVPAAEGEDSLKKMQLMELA 198
Query: 92 ILNGTLRE 99
ILNGT R+
Sbjct: 199 ILNGTYRD 206
>FB|FBgn0264491 [details] [associations]
symbol:how "held out wings" species:7227 "Drosophila
melanogaster" [GO:0007525 "somatic muscle development"
evidence=IMP] [GO:0005634 "nucleus" evidence=IC;NAS;IDA]
[GO:0008016 "regulation of heart contraction" evidence=IMP]
[GO:0007517 "muscle organ development" evidence=IMP] [GO:0007521
"muscle cell fate determination" evidence=IDA] [GO:0007155 "cell
adhesion" evidence=IMP] [GO:0009790 "embryo development"
evidence=IMP] [GO:0007475 "apposition of dorsal and ventral
imaginal disc-derived wing surfaces" evidence=IMP] [GO:0003729
"mRNA binding" evidence=NAS;IDA] [GO:0007498 "mesoderm development"
evidence=IEP] [GO:0030154 "cell differentiation" evidence=TAS]
[GO:0005737 "cytoplasm" evidence=NAS] [GO:0000381 "regulation of
alternative mRNA splicing, via spliceosome" evidence=IMP]
[GO:0008347 "glial cell migration" evidence=IMP] [GO:0008366 "axon
ensheathment" evidence=IMP] [GO:0007438 "oenocyte development"
evidence=IMP] [GO:0003730 "mRNA 3'-UTR binding" evidence=IDA]
[GO:0008078 "mesodermal cell migration" evidence=IMP] [GO:0045214
"sarcomere organization" evidence=IMP] [GO:0007284 "spermatogonial
cell division" evidence=IMP] [GO:0030718 "germ-line stem cell
maintenance" evidence=IMP] InterPro:IPR004087 InterPro:IPR004088
Pfam:PF00013 PROSITE:PS50084 SMART:SM00322 EMBL:AE014297
GO:GO:0005634 GO:GO:0007155 GO:GO:0008016 GO:GO:0007438
GO:GO:0016203 GO:GO:0003730 GO:GO:0045214 GO:GO:0030718
GO:GO:0008078 GO:GO:0008347 GO:GO:0007475 GO:GO:0007284
eggNOG:COG5176 GeneTree:ENSGT00550000074434 GO:GO:0007525
GO:GO:0000381 GO:GO:0008366 EMBL:U85651 EMBL:U72331 EMBL:AF003106
EMBL:AF003107 EMBL:U87150 EMBL:AY069862 RefSeq:NP_001027203.1
RefSeq:NP_001163683.1 RefSeq:NP_001163684.1 RefSeq:NP_524447.2
RefSeq:NP_732695.1 UniGene:Dm.20227 ProteinModelPortal:O01367
SMR:O01367 IntAct:O01367 MINT:MINT-307488 STRING:O01367
PaxDb:O01367 PRIDE:O01367 EnsemblMetazoa:FBtr0084177
EnsemblMetazoa:FBtr0301401 GeneID:42596 KEGG:dme:Dmel_CG10293
CTD:42596 FlyBase:FBgn0017397 InParanoid:O01367 KO:K14945
OMA:SLFQING OrthoDB:EOG4FJ6RD PhylomeDB:O01367 ChiTaRS:how
GenomeRNAi:42596 NextBio:829604 Bgee:O01367 GermOnline:CG10293
GO:GO:0007521 Uniprot:O01367
Length = 405
Score = 138 (53.6 bits), Expect = 1.1e-08, P = 1.1e-08
Identities = 31/68 (45%), Positives = 42/68 (61%)
Query: 32 KDKPGYEHLNEPLHMLVEAEFPEVIINSCLDHAVAILENLLKPVDESLDHYKKQQLRELA 91
+ KP +EHL++ LH+L+ E E L AVA ++ LL P E D KK+QL ELA
Sbjct: 194 RGKPNWEHLSDDLHVLITVEDTENRATVKLAQAVAEVQKLLVPQAEGEDELKKRQLMELA 253
Query: 92 ILNGTLRE 99
I+NGT R+
Sbjct: 254 IINGTYRD 261
>UNIPROTKB|G5EFF1 [details] [associations]
symbol:asd-2 "Protein ASD-2, isoform c" species:6239
"Caenorhabditis elegans" [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR004087 InterPro:IPR004088 Pfam:PF00013
PROSITE:PS50084 SMART:SM00322 GO:GO:0005634 GO:GO:0009792
GO:GO:0002009 GO:GO:0006898 GO:GO:0040007 GO:GO:0018991
GO:GO:0040010 GO:GO:0007411 GO:GO:0002119 GO:GO:0003727
GO:GO:0040017 GO:GO:0007413 GO:GO:0097157
GeneTree:ENSGT00550000074434 GO:GO:0000381 GO:GO:0043186
EMBL:FO080897 UniGene:Cel.16725 GeneID:188703 KEGG:cel:CELE_T21G5.5
CTD:188703 EMBL:EF630626 RefSeq:NP_001021627.1 SMR:G5EFF1
IntAct:G5EFF1 EnsemblMetazoa:T21G5.5c WormBase:T21G5.5c
NextBio:939786 Uniprot:G5EFF1
Length = 445
Score = 134 (52.2 bits), Expect = 3.7e-08, P = 3.7e-08
Identities = 32/72 (44%), Positives = 43/72 (59%)
Query: 28 KVEI-KDKPGYEHLNEPLHMLVEAEFPEVIINSCLDHAVAILENLLKPVDESLDHYKKQQ 86
K E+ + KP +EHL+E LH+L++ E E L AV + LL P E D K++Q
Sbjct: 182 KEELNRGKPNWEHLSEELHVLIQCEDTENRAKVKLMRAVEEVRKLLVPAPEGEDDLKRKQ 241
Query: 87 LRELAILNGTLR 98
L ELAI+NGT R
Sbjct: 242 LMELAIINGTYR 253
>WB|WBGene00006423 [details] [associations]
symbol:asd-2 species:6239 "Caenorhabditis elegans"
[GO:0003723 "RNA binding" evidence=IEA] [GO:0040010 "positive
regulation of growth rate" evidence=IMP] [GO:0002119 "nematode
larval development" evidence=IMP] [GO:0040011 "locomotion"
evidence=IMP] [GO:0040017 "positive regulation of locomotion"
evidence=IMP] [GO:0018991 "oviposition" evidence=IMP] [GO:0007411
"axon guidance" evidence=IMP] [GO:0007413 "axonal fasciculation"
evidence=IMP] [GO:0006898 "receptor-mediated endocytosis"
evidence=IMP] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0040007 "growth" evidence=IMP]
[GO:0002009 "morphogenesis of an epithelium" evidence=IMP]
[GO:0000381 "regulation of alternative mRNA splicing, via
spliceosome" evidence=IMP] [GO:0043186 "P granule" evidence=IDA]
[GO:0003727 "single-stranded RNA binding" evidence=IDA] [GO:0005634
"nucleus" evidence=IDA] [GO:0097157 "pre-mRNA intronic binding"
evidence=IPI] [GO:0030529 "ribonucleoprotein complex" evidence=IPI]
[GO:0005515 "protein binding" evidence=IPI] InterPro:IPR004087
InterPro:IPR004088 Pfam:PF00013 PROSITE:PS50084 SMART:SM00322
GO:GO:0005634 GO:GO:0009792 GO:GO:0002009 GO:GO:0006898
GO:GO:0040007 GO:GO:0018991 GO:GO:0040010 GO:GO:0007411
GO:GO:0002119 GO:GO:0003727 GO:GO:0040017 GO:GO:0007413
GO:GO:0097157 GeneTree:ENSGT00550000074434 GO:GO:0000381
GO:GO:0043186 EMBL:FO080897 EMBL:FO080896 RefSeq:NP_001250340.1
UniGene:Cel.16725 ProteinModelPortal:D4YW53 SMR:D4YW53
EnsemblMetazoa:T21G5.5d GeneID:188703 KEGG:cel:CELE_T21G5.5
CTD:188703 WormBase:T21G5.5d OMA:IQQYAAG ArrayExpress:D4YW53
Uniprot:D4YW53
Length = 486
Score = 134 (52.2 bits), Expect = 4.2e-08, P = 4.2e-08
Identities = 32/72 (44%), Positives = 43/72 (59%)
Query: 28 KVEI-KDKPGYEHLNEPLHMLVEAEFPEVIINSCLDHAVAILENLLKPVDESLDHYKKQQ 86
K E+ + KP +EHL+E LH+L++ E E L AV + LL P E D K++Q
Sbjct: 212 KEELNRGKPNWEHLSEELHVLIQCEDTENRAKVKLMRAVEEVRKLLVPAPEGEDDLKRKQ 271
Query: 87 LRELAILNGTLR 98
L ELAI+NGT R
Sbjct: 272 LMELAIINGTYR 283
>WB|WBGene00001595 [details] [associations]
symbol:gld-1 species:6239 "Caenorhabditis elegans"
[GO:0003723 "RNA binding" evidence=IEA] [GO:0009792 "embryo
development ending in birth or egg hatching" evidence=IMP]
[GO:0000003 "reproduction" evidence=IMP] [GO:0042127 "regulation of
cell proliferation" evidence=IMP] [GO:0040020 "regulation of
meiosis" evidence=IMP] [GO:0048477 "oogenesis" evidence=IMP]
[GO:0051729 "germline cell cycle switching, mitotic to meiotic cell
cycle" evidence=IMP] [GO:0006898 "receptor-mediated endocytosis"
evidence=IMP] [GO:0040027 "negative regulation of vulval
development" evidence=IMP] [GO:0007276 "gamete generation"
evidence=IMP] [GO:0005829 "cytosol" evidence=IDA] [GO:0043186 "P
granule" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
[GO:0003730 "mRNA 3'-UTR binding" evidence=IDA] [GO:0003727
"single-stranded RNA binding" evidence=IDA] [GO:0048027 "mRNA
5'-UTR binding" evidence=IDA] [GO:0017148 "negative regulation of
translation" evidence=IMP] InterPro:IPR004087 InterPro:IPR004088
Pfam:PF00013 PROSITE:PS50084 SMART:SM00322 GO:GO:0005829
GO:GO:0009792 GO:GO:0007126 GO:GO:0006898 GO:GO:0030154
GO:GO:0017148 GO:GO:0003727 GO:GO:0048477 GO:GO:0051729
GO:GO:0042127 GO:GO:0048027 GO:GO:0003730 GO:GO:0040027
GO:GO:0040020 eggNOG:COG5176 GeneTree:ENSGT00550000074434
EMBL:Z81130 EMBL:U20535 PIR:T25193 RefSeq:NP_492143.1 PDB:3K6T
PDB:3KBL PDBsum:3K6T PDBsum:3KBL ProteinModelPortal:Q17339
SMR:Q17339 DIP:DIP-24870N IntAct:Q17339 MINT:MINT-1054588
STRING:Q17339 PaxDb:Q17339 EnsemblMetazoa:T23G11.3.1
EnsemblMetazoa:T23G11.3.2 GeneID:172532 KEGG:cel:CELE_T23G11.3
UCSC:T23G11.3 CTD:172532 WormBase:T23G11.3 HOGENOM:HOG000015966
InParanoid:Q17339 OMA:TENRVHL BindingDB:Q17339 ChEMBL:CHEMBL1293302
EvolutionaryTrace:Q17339 NextBio:875927 GermOnline:T23G11.3
Uniprot:Q17339
Length = 463
Score = 128 (50.1 bits), Expect = 1.7e-07, P = 1.7e-07
Identities = 28/67 (41%), Positives = 41/67 (61%)
Query: 32 KDKPGYEHLNEPLHMLVEAEFPEVIINSCLDHAVAILENLLKPVDESLDHYKKQQLRELA 91
+ K +EHL + LH+LV+ E E ++ L A+ ++ LL P E D K++QL ELA
Sbjct: 262 RGKANWEHLEDDLHVLVQCEDTENRVHIKLQAALEQVKKLLIPAPEGTDELKRKQLMELA 321
Query: 92 ILNGTLR 98
I+NGT R
Sbjct: 322 IINGTYR 328
>WB|WBGene00022101 [details] [associations]
symbol:Y69A2AR.32 species:6239 "Caenorhabditis elegans"
[GO:0003723 "RNA binding" evidence=IEA] [GO:0040018 "positive
regulation of multicellular organism growth" evidence=IMP]
[GO:0010171 "body morphogenesis" evidence=IMP] InterPro:IPR004087
InterPro:IPR004088 Pfam:PF00013 PROSITE:PS50084 SMART:SM00322
GO:GO:0010171 GO:GO:0040018 GO:GO:0003723
GeneTree:ENSGT00550000074434 EMBL:FO081818 RefSeq:NP_741340.2
ProteinModelPortal:H2L0S1 PRIDE:H2L0S1 EnsemblMetazoa:Y69A2AR.32a
GeneID:177042 KEGG:cel:CELE_Y69A2AR.32 CTD:177042
WormBase:Y69A2AR.32a OMA:PLHVYIE Uniprot:H2L0S1
Length = 384
Score = 113 (44.8 bits), Expect = 5.4e-06, P = 5.4e-06
Identities = 20/57 (35%), Positives = 36/57 (63%)
Query: 42 EPLHMLVEAEFPEVIINSCLDHAVAILENLLKPVDESLDHYKKQQLRELAILNGTLR 98
EPLH+ +E + + + + HAV +++ LL P + D K+QQL +++++NGT R
Sbjct: 150 EPLHVYIECQDTQSAAQAKMAHAVEVIQRLLSPPKDGKDELKRQQLVDISLINGTYR 206
>DICTYBASE|DDB_G0293554 [details] [associations]
symbol:sf1 "CCHC-type zinc finger-containing protein"
species:44689 "Dictyostelium discoideum" [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA;ISS]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0000398 "mRNA
splicing, via spliceosome" evidence=ISS] [GO:0000243 "commitment
complex" evidence=ISS] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA] [GO:0006397
"mRNA processing" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR001878 InterPro:IPR004087 InterPro:IPR004088
Pfam:PF00013 PROSITE:PS50084 PROSITE:PS50158 SMART:SM00322
SMART:SM00343 dictyBase:DDB_G0293554 GenomeReviews:CM000155_GR
GO:GO:0046872 GO:GO:0008270 GO:GO:0003723 GO:GO:0000398
EMBL:AAFI02000218 HSSP:Q9BW01 eggNOG:COG5176 KO:K13095
RefSeq:XP_629004.1 ProteinModelPortal:Q54BM5
EnsemblProtists:DDB0233391 GeneID:8629288 KEGG:ddi:DDB_G0293554
InParanoid:Q54BM5 OMA:ENDELHV GO:GO:0000243 Uniprot:Q54BM5
Length = 501
Score = 112 (44.5 bits), Expect = 1.0e-05, P = 1.0e-05
Identities = 26/59 (44%), Positives = 38/59 (64%)
Query: 41 NEPLHMLVEAEFPEVIINSCLDHAVAILENLLKPVDESLDHYKKQQLRELAILNGTLRE 99
N+ LH+L+ A+ + LD A ++ L PV+E + +K+QQLRELA +NGTLRE
Sbjct: 239 NDELHVLLTADTVDQ-----LDKAEVLVREFLIPVEEGKNEHKRQQLRELAEMNGTLRE 292
>WB|WBGene00044674 [details] [associations]
symbol:B0280.17 species:6239 "Caenorhabditis elegans"
[GO:0003723 "RNA binding" evidence=IEA] [GO:0000003 "reproduction"
evidence=IMP] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0008219 "cell death" evidence=IMP]
InterPro:IPR004087 InterPro:IPR004088 Pfam:PF00013 SMART:SM00322
GO:GO:0009792 GO:GO:0008219 GO:GO:0000003 GO:GO:0003723
eggNOG:COG5176 GeneTree:ENSGT00550000074434 EMBL:FO080148
RefSeq:NP_001040836.2 ProteinModelPortal:Q2V4X2 SMR:Q2V4X2
EnsemblMetazoa:B0280.17 GeneID:4363051 KEGG:cel:CELE_B0280.17
UCSC:B0280.17 CTD:4363051 WormBase:B0280.17 HOGENOM:HOG000020938
InParanoid:Q2V4X2 OMA:IRGKGCT NextBio:959623 Uniprot:Q2V4X2
Length = 260
Score = 106 (42.4 bits), Expect = 1.5e-05, P = 1.5e-05
Identities = 30/97 (30%), Positives = 49/97 (50%)
Query: 4 EVDLLIKFKVSINGCPYTYTSLSIKVE-IKDKPGYEHLNEPLHMLVEAEFP-EVIINSCL 61
E DL K + GC T K E ++++ G+EHL EP+H+++ E + L
Sbjct: 171 EKDLGCKLFIRGKGC----TKDDAKEERLRERVGWEHLKEPIHVMISVRSDSEEAASEKL 226
Query: 62 DHAVAILENLLKPVDESLDHYKKQQLRELAILNGTLR 98
+L+ L+ D L K+ QL +LA++ GTL+
Sbjct: 227 SSIKKMLQEFLEHTDSEL---KRSQLMQLAVIEGTLK 260
>RGD|620645 [details] [associations]
symbol:Sf1 "splicing factor 1" species:10116 "Rattus norvegicus"
[GO:0005634 "nucleus" evidence=ISO] [GO:0005681 "spliceosomal
complex" evidence=ISO] [GO:0006917 "induction of apoptosis"
evidence=NAS] [GO:0022402 "cell cycle process" evidence=ISO]
[GO:0030238 "male sex determination" evidence=ISO] [GO:0033327
"Leydig cell differentiation" evidence=ISO] [GO:0048662 "negative
regulation of smooth muscle cell proliferation" evidence=IMP]
[GO:0050810 "regulation of steroid biosynthetic process"
evidence=ISO] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR004087 InterPro:IPR004088 Pfam:PF00013 PROSITE:PS50084
SMART:SM00322 RGD:620645 GO:GO:0006917 GO:GO:0033327 GO:GO:0050810
GO:GO:0005681 GO:GO:0003723 GO:GO:0048662 HSSP:Q9BW01
eggNOG:COG5176 GO:GO:0022402 GO:GO:0030238 HOGENOM:HOG000237321
OrthoDB:EOG4VHK6F IPI:IPI00558327 EMBL:AF079873 UniGene:Rn.1074
UniGene:Rn.220071 STRING:O88629 UCSC:RGD:620645 InParanoid:O88629
ArrayExpress:O88629 Genevestigator:O88629 Uniprot:O88629
Length = 173
Score = 97 (39.2 bits), Expect = 4.8e-05, P = 4.8e-05
Identities = 32/76 (42%), Positives = 39/76 (51%)
Query: 28 KVEIKDKPGYEHLNEPLHMLVEAEFPEVIINSCLDHAVAILENLLKP---VDESLDHYKK 84
KV KD +EPLH LV A E + AV + N+LK E + +K
Sbjct: 76 KVGRKDGQMLPGEDEPLHALVTANTMENV-----KKAVEQIRNILKQGIETPEDQNDLRK 130
Query: 85 QQLRELAILNGTLREE 100
QLRELA LNGTLRE+
Sbjct: 131 MQLRELARLNGTLRED 146
>UNIPROTKB|F1RZV6 [details] [associations]
symbol:KHDRBS2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0046982 "protein heterodimerization activity"
evidence=IEA] [GO:0042169 "SH2 domain binding" evidence=IEA]
[GO:0017124 "SH3 domain binding" evidence=IEA] [GO:0008266 "poly(U)
RNA binding" evidence=IEA] [GO:0008143 "poly(A) RNA binding"
evidence=IEA] InterPro:IPR004087 InterPro:IPR004088 Pfam:PF00013
PROSITE:PS50084 SMART:SM00322 GO:GO:0008266
GeneTree:ENSGT00550000074434 GO:GO:0008143 OMA:PPIARGV
EMBL:CT797468 EMBL:CT961061 EMBL:CU407231 EMBL:CU570917
EMBL:FP565898 Ensembl:ENSSSCT00000001662 Uniprot:F1RZV6
Length = 277
Score = 98 (39.6 bits), Expect = 0.00013, P = 0.00013
Identities = 23/60 (38%), Positives = 37/60 (61%)
Query: 37 YEHLNEPLHMLVEAEFPEVIINSCLDHAVAILENLLKPVDESLDHYKKQQLRELAILNGT 96
Y HL++ LH+L+E P S + HA+ ++ L P D + D +++QLREL+ LNG+
Sbjct: 124 YAHLSDELHVLIEVFAPPGEAYSRMSHALEEIKKFLVP-DYN-DEIRQEQLRELSYLNGS 181
>UNIPROTKB|E1BVW8 [details] [associations]
symbol:KHDRBS2 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0008143 "poly(A) RNA binding" evidence=IEA]
[GO:0008266 "poly(U) RNA binding" evidence=IEA] [GO:0017124 "SH3
domain binding" evidence=IEA] [GO:0042169 "SH2 domain binding"
evidence=IEA] [GO:0046982 "protein heterodimerization activity"
evidence=IEA] InterPro:IPR004087 InterPro:IPR004088 Pfam:PF00013
PROSITE:PS50084 SMART:SM00322 GO:GO:0008266
GeneTree:ENSGT00550000074434 GO:GO:0008143 CTD:202559 OMA:PPIARGV
EMBL:AADN02002672 EMBL:AADN02002673 EMBL:AADN02002674
EMBL:AADN02002675 EMBL:AADN02002676 EMBL:AADN02002677
EMBL:AADN02002678 EMBL:AADN02002679 EMBL:AADN02002680
IPI:IPI00593041 RefSeq:XP_426201.2 UniGene:Gga.14902
Ensembl:ENSGALT00000026242 GeneID:428643 KEGG:gga:428643
NextBio:20829580 Uniprot:E1BVW8
Length = 348
Score = 98 (39.6 bits), Expect = 0.00020, P = 0.00020
Identities = 23/60 (38%), Positives = 37/60 (61%)
Query: 37 YEHLNEPLHMLVEAEFPEVIINSCLDHAVAILENLLKPVDESLDHYKKQQLRELAILNGT 96
Y HL++ LH+L+E P S + HA+ ++ L P D + D +++QLREL+ LNG+
Sbjct: 124 YAHLSDELHVLIEVFAPPGEAYSRMSHALEEIKKFLVP-DYN-DEIRQEQLRELSYLNGS 181
>UNIPROTKB|E1BP48 [details] [associations]
symbol:KHDRBS2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0046982 "protein heterodimerization activity"
evidence=IEA] [GO:0042169 "SH2 domain binding" evidence=IEA]
[GO:0017124 "SH3 domain binding" evidence=IEA] [GO:0008266 "poly(U)
RNA binding" evidence=IEA] [GO:0008143 "poly(A) RNA binding"
evidence=IEA] InterPro:IPR004087 InterPro:IPR004088 Pfam:PF00013
PROSITE:PS50084 SMART:SM00322 GO:GO:0008266
GeneTree:ENSGT00550000074434 GO:GO:0008143 CTD:202559 OMA:PPIARGV
EMBL:DAAA02054729 EMBL:DAAA02054730 EMBL:DAAA02054731
EMBL:DAAA02054732 EMBL:DAAA02054733 EMBL:DAAA02054734
EMBL:DAAA02054735 EMBL:DAAA02054736 EMBL:DAAA02054737
EMBL:DAAA02054738 EMBL:DAAA02054739 EMBL:DAAA02054740
EMBL:DAAA02054741 EMBL:DAAA02054742 EMBL:DAAA02054743
EMBL:DAAA02054744 EMBL:DAAA02054745 EMBL:DAAA02054746
IPI:IPI00913818 RefSeq:XP_002697212.1 Ensembl:ENSBTAT00000061105
GeneID:789972 KEGG:bta:789972 NextBio:20929992 Uniprot:E1BP48
Length = 348
Score = 98 (39.6 bits), Expect = 0.00020, P = 0.00020
Identities = 23/60 (38%), Positives = 37/60 (61%)
Query: 37 YEHLNEPLHMLVEAEFPEVIINSCLDHAVAILENLLKPVDESLDHYKKQQLRELAILNGT 96
Y HL++ LH+L+E P S + HA+ ++ L P D + D +++QLREL+ LNG+
Sbjct: 124 YAHLSDELHVLIEVFAPPGEAYSRMSHALEEIKKFLVP-DYN-DEIRQEQLRELSYLNGS 181
>UNIPROTKB|E2QWN2 [details] [associations]
symbol:KHDRBS2 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0046982 "protein heterodimerization
activity" evidence=IEA] [GO:0042169 "SH2 domain binding"
evidence=IEA] [GO:0017124 "SH3 domain binding" evidence=IEA]
[GO:0008266 "poly(U) RNA binding" evidence=IEA] [GO:0008143
"poly(A) RNA binding" evidence=IEA] InterPro:IPR004087
InterPro:IPR004088 Pfam:PF00013 PROSITE:PS50084 SMART:SM00322
GO:GO:0008266 GeneTree:ENSGT00550000074434 GO:GO:0008143 CTD:202559
OMA:PPIARGV EMBL:AAEX03008417 EMBL:AAEX03008418 EMBL:AAEX03008419
RefSeq:XP_538980.2 ProteinModelPortal:E2QWN2
Ensembl:ENSCAFT00000003891 GeneID:481859 KEGG:cfa:481859
NextBio:20856585 Uniprot:E2QWN2
Length = 349
Score = 98 (39.6 bits), Expect = 0.00020, P = 0.00020
Identities = 23/60 (38%), Positives = 37/60 (61%)
Query: 37 YEHLNEPLHMLVEAEFPEVIINSCLDHAVAILENLLKPVDESLDHYKKQQLRELAILNGT 96
Y HL++ LH+L+E P S + HA+ ++ L P D + D +++QLREL+ LNG+
Sbjct: 124 YAHLSDELHVLIEVFAPPGEAYSRMSHALEEIKKFLVP-DYN-DEIRQEQLRELSYLNGS 181
>UNIPROTKB|Q5VWX1 [details] [associations]
symbol:KHDRBS2 "KH domain-containing, RNA-binding, signal
transduction-associated protein 2" species:9606 "Homo sapiens"
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0008143 "poly(A) RNA binding" evidence=IEA]
[GO:0008266 "poly(U) RNA binding" evidence=IEA] [GO:0017124 "SH3
domain binding" evidence=IEA] [GO:0042169 "SH2 domain binding"
evidence=IEA] [GO:0046982 "protein heterodimerization activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005515
"protein binding" evidence=IPI] InterPro:IPR004087
InterPro:IPR004088 Pfam:PF00013 PROSITE:PS50084 SMART:SM00322
GO:GO:0005634 GO:GO:0008266 GO:GO:0006355 GO:GO:0006351
eggNOG:COG5176 GO:GO:0008143 HOGENOM:HOG000230771
HOVERGEN:HBG079164 CTD:202559 OMA:PPIARGV OrthoDB:EOG418BP2
EMBL:AY077838 EMBL:AK292043 EMBL:AL360220 EMBL:AL049544
EMBL:AL138882 EMBL:AL355347 EMBL:AL391644 EMBL:Z93021 EMBL:CH471143
EMBL:BC034043 IPI:IPI00166708 RefSeq:NP_689901.2 UniGene:Hs.519794
HSSP:Q32NN2 ProteinModelPortal:Q5VWX1 SMR:Q5VWX1 IntAct:Q5VWX1
MINT:MINT-1449914 STRING:Q5VWX1 PhosphoSite:Q5VWX1 DMDM:74762274
PaxDb:Q5VWX1 PRIDE:Q5VWX1 DNASU:202559 Ensembl:ENST00000281156
GeneID:202559 KEGG:hsa:202559 UCSC:uc003peg.2 GeneCards:GC06M062447
H-InvDB:HIX0005989 HGNC:HGNC:18114 HPA:HPA029392 MIM:610487
neXtProt:NX_Q5VWX1 PharmGKB:PA30093 InParanoid:Q5VWX1
PhylomeDB:Q5VWX1 GenomeRNAi:202559 NextBio:90301
ArrayExpress:Q5VWX1 Bgee:Q5VWX1 CleanEx:HS_KHDRBS2
Genevestigator:Q5VWX1 Uniprot:Q5VWX1
Length = 349
Score = 98 (39.6 bits), Expect = 0.00020, P = 0.00020
Identities = 23/60 (38%), Positives = 37/60 (61%)
Query: 37 YEHLNEPLHMLVEAEFPEVIINSCLDHAVAILENLLKPVDESLDHYKKQQLRELAILNGT 96
Y HL++ LH+L+E P S + HA+ ++ L P D + D +++QLREL+ LNG+
Sbjct: 124 YAHLSDELHVLIEVFAPPGEAYSRMSHALEEIKKFLVP-DYN-DEIRQEQLRELSYLNGS 181
>MGI|MGI:2159649 [details] [associations]
symbol:Khdrbs2 "KH domain containing, RNA binding, signal
transduction associated 2" species:10090 "Mus musculus" [GO:0003723
"RNA binding" evidence=IEA] [GO:0005070 "SH3/SH2 adaptor activity"
evidence=TAS] [GO:0005634 "nucleus" evidence=TAS] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0008143 "poly(A) RNA binding" evidence=IDA] [GO:0008266
"poly(U) RNA binding" evidence=IDA] [GO:0017124 "SH3 domain
binding" evidence=IDA] [GO:0042169 "SH2 domain binding"
evidence=IDA] [GO:0046982 "protein heterodimerization activity"
evidence=IDA] InterPro:IPR004087 InterPro:IPR004088 Pfam:PF00013
PROSITE:PS50084 SMART:SM00322 MGI:MGI:2159649 GO:GO:0005634
GO:GO:0008266 GO:GO:0006355 GO:GO:0005070 GO:GO:0017124
GO:GO:0006351 GO:GO:0042169 GO:GO:0046982 eggNOG:COG5176
GeneTree:ENSGT00550000074434 GO:GO:0008143 HOGENOM:HOG000230771
HOVERGEN:HBG079164 CTD:202559 OMA:PPIARGV OrthoDB:EOG418BP2
HSSP:Q32NN2 EMBL:AF098796 EMBL:BC066814 EMBL:BC132117 EMBL:BC132119
IPI:IPI00322691 IPI:IPI00874354 RefSeq:NP_573498.1
UniGene:Mm.336594 ProteinModelPortal:Q9WU01 SMR:Q9WU01
STRING:Q9WU01 PhosphoSite:Q9WU01 PaxDb:Q9WU01 PRIDE:Q9WU01
Ensembl:ENSMUST00000027226 GeneID:170771 KEGG:mmu:170771
UCSC:uc007ano.1 UCSC:uc007anp.1 InParanoid:Q9WU01 ChiTaRS:KHDRBS2
NextBio:370395 Bgee:Q9WU01 Genevestigator:Q9WU01 Uniprot:Q9WU01
Length = 349
Score = 98 (39.6 bits), Expect = 0.00020, P = 0.00020
Identities = 23/60 (38%), Positives = 37/60 (61%)
Query: 37 YEHLNEPLHMLVEAEFPEVIINSCLDHAVAILENLLKPVDESLDHYKKQQLRELAILNGT 96
Y HL++ LH+L+E P S + HA+ ++ L P D + D +++QLREL+ LNG+
Sbjct: 124 YAHLSDELHVLIEVFAPPGEAYSRMSHALEEIKKFLVP-DYN-DEIRQEQLRELSYLNGS 181
>RGD|621738 [details] [associations]
symbol:Khdrbs2 "KH domain containing, RNA binding, signal
transduction associated 2" species:10116 "Rattus norvegicus"
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0008143 "poly(A) RNA binding"
evidence=IEA;ISO] [GO:0008266 "poly(U) RNA binding"
evidence=IEA;ISO] [GO:0017124 "SH3 domain binding"
evidence=IEA;ISO] [GO:0042169 "SH2 domain binding"
evidence=IEA;ISO] [GO:0046982 "protein heterodimerization activity"
evidence=IEA;ISO] InterPro:IPR004087 InterPro:IPR004088
Pfam:PF00013 PROSITE:PS50084 SMART:SM00322 RGD:621738 GO:GO:0005634
GO:GO:0008266 GO:GO:0006355 GO:GO:0006351 eggNOG:COG5176
GeneTree:ENSGT00550000074434 GO:GO:0008143 HOGENOM:HOG000230771
HOVERGEN:HBG079164 CTD:202559 OMA:PPIARGV OrthoDB:EOG418BP2
HSSP:Q32NN2 EMBL:AF305618 IPI:IPI00200486 RefSeq:NP_579852.1
UniGene:Rn.154423 ProteinModelPortal:Q920F3 STRING:Q920F3
PhosphoSite:Q920F3 PRIDE:Q920F3 Ensembl:ENSRNOT00000016578
GeneID:170843 KEGG:rno:170843 UCSC:RGD:621738 InParanoid:Q920F3
NextBio:621265 ArrayExpress:Q920F3 Genevestigator:Q920F3
Uniprot:Q920F3
Length = 349
Score = 98 (39.6 bits), Expect = 0.00020, P = 0.00020
Identities = 23/60 (38%), Positives = 37/60 (61%)
Query: 37 YEHLNEPLHMLVEAEFPEVIINSCLDHAVAILENLLKPVDESLDHYKKQQLRELAILNGT 96
Y HL++ LH+L+E P S + HA+ ++ L P D + D +++QLREL+ LNG+
Sbjct: 124 YAHLSDELHVLIEVFAPPGEAYSRMSHALEEIKKFLVP-DYN-DEIRQEQLRELSYLNGS 181
>POMBASE|SPCC962.06c [details] [associations]
symbol:bpb1 "zinc finger splicing factor Bpb1"
species:4896 "Schizosaccharomyces pombe" [GO:0000243 "commitment
complex" evidence=IDA] [GO:0000349 "generation of catalytic
spliceosome for first transesterification step" evidence=IDA]
[GO:0003723 "RNA binding" evidence=ISM] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0008270 "zinc
ion binding" evidence=IEA] InterPro:IPR001878 InterPro:IPR004087
InterPro:IPR004088 Pfam:PF00013 Pfam:PF00098 PROSITE:PS50084
PROSITE:PS50158 SMART:SM00322 SMART:SM00343 PomBase:SPCC962.06c
GO:GO:0005829 EMBL:CU329672 GenomeReviews:CU329672_GR GO:GO:0046872
GO:GO:0008270 GO:GO:0003723 eggNOG:COG5082 Gene3D:4.10.60.10
SUPFAM:SSF57756 HSSP:Q9BW01 KO:K13095 GO:GO:0000243 EMBL:AF073779
PIR:T41653 RefSeq:NP_587871.1 ProteinModelPortal:O74555 SMR:O74555
STRING:O74555 EnsemblFungi:SPCC962.06c.1 GeneID:2538832
KEGG:spo:SPCC962.06c HOGENOM:HOG000197271 OMA:RIEEISH
OrthoDB:EOG4HQHTF NextBio:20800014 GO:GO:0000349 Uniprot:O74555
Length = 587
Score = 101 (40.6 bits), Expect = 0.00020, P = 0.00020
Identities = 24/65 (36%), Positives = 41/65 (63%)
Query: 39 HLNEPLHMLVEAEFPEVIINSCLDHAVAILENLLKP---VDESLDHYKKQQLRELAILNG 95
++ E LH LV A+ + I +HA+ +++N+++ V E + K+ QLR+LA LNG
Sbjct: 247 NMEEDLHCLVTADSEDKI-----NHAIKLIDNVIQTAASVPEGQNDLKRNQLRQLATLNG 301
Query: 96 TLREE 100
TLR++
Sbjct: 302 TLRDD 306
>UNIPROTKB|I3LAN7 [details] [associations]
symbol:LOC100625959 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0003723 "RNA binding" evidence=IEA]
InterPro:IPR004087 SMART:SM00322 GO:GO:0003723
GeneTree:ENSGT00550000074434 Ensembl:ENSSSCT00000023135 OMA:PEMNDEI
Uniprot:I3LAN7
Length = 151
Score = 90 (36.7 bits), Expect = 0.00021, P = 0.00021
Identities = 22/59 (37%), Positives = 34/59 (57%)
Query: 37 YEHLNEPLHMLVEAEFPEVIINSCLDHAVAILENLLKPVDESLDHYKKQQLRELAILNG 95
Y HLN+ LH+L+E P + + HA+ ++ L P D + D ++ QL+EL LNG
Sbjct: 67 YFHLNDDLHVLIEVFAPPAEAYARMGHALEEIKKFLIP-DYN-DEIRQAQLQELTYLNG 123
>UNIPROTKB|E5RG12 [details] [associations]
symbol:KHDRBS3 "KH domain-containing, RNA-binding, signal
transduction-associated protein 3" species:9606 "Homo sapiens"
[GO:0003723 "RNA binding" evidence=IEA] InterPro:IPR004087
SMART:SM00322 GO:GO:0003723 HGNC:HGNC:18117 EMBL:AC040914
EMBL:AC104371 IPI:IPI00980277 ProteinModelPortal:E5RG12 SMR:E5RG12
Ensembl:ENST00000517394 ArrayExpress:E5RG12 Bgee:E5RG12
Uniprot:E5RG12
Length = 161
Score = 90 (36.7 bits), Expect = 0.00025, P = 0.00025
Identities = 22/59 (37%), Positives = 34/59 (57%)
Query: 37 YEHLNEPLHMLVEAEFPEVIINSCLDHAVAILENLLKPVDESLDHYKKQQLRELAILNG 95
Y HLN+ LH+L+E P + + HA+ ++ L P D + D ++ QL+EL LNG
Sbjct: 93 YFHLNDDLHVLIEVFAPPAEAYARMGHALEEIKKFLIP-DYN-DEIRQAQLQELTYLNG 149
>ZFIN|ZDB-GENE-061013-497 [details] [associations]
symbol:khdrbs2 "KH domain containing, RNA binding,
signal transduction associated 2" species:7955 "Danio rerio"
[GO:0003723 "RNA binding" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] InterPro:IPR004087 InterPro:IPR004088 Pfam:PF00013
PROSITE:PS50084 SMART:SM00322 ZFIN:ZDB-GENE-061013-497
GO:GO:0005634 GO:GO:0006355 GO:GO:0006351 GO:GO:0003723
eggNOG:COG5176 GeneTree:ENSGT00550000074434 HOGENOM:HOG000230771
HOVERGEN:HBG079164 EMBL:BC124701 IPI:IPI00802483
RefSeq:NP_001070758.1 UniGene:Dr.92774 ProteinModelPortal:Q08BJ2
PRIDE:Q08BJ2 Ensembl:ENSDART00000101134 GeneID:768147
KEGG:dre:768147 CTD:202559 InParanoid:Q08BJ2 OMA:PPIARGV
OrthoDB:EOG418BP2 NextBio:20918466 Bgee:Q08BJ2 Uniprot:Q08BJ2
Length = 346
Score = 96 (38.9 bits), Expect = 0.00032, P = 0.00032
Identities = 23/60 (38%), Positives = 36/60 (60%)
Query: 37 YEHLNEPLHMLVEAEFPEVIINSCLDHAVAILENLLKPVDESLDHYKKQQLRELAILNGT 96
Y HL+ LH+L+E P S + HA+ ++ L P D + D +++QLREL+ LNG+
Sbjct: 124 YAHLSNDLHVLIEVFAPPGEAYSRMSHALEEIKKFLVP-DYN-DEIRQEQLRELSYLNGS 181
>UNIPROTKB|B4DX42 [details] [associations]
symbol:SF1 "Splicing factor 1" species:9606 "Homo sapiens"
[GO:0003723 "RNA binding" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0022402 "cell cycle process"
evidence=IEA] [GO:0030238 "male sex determination" evidence=IEA]
[GO:0033327 "Leydig cell differentiation" evidence=IEA] [GO:0050810
"regulation of steroid biosynthetic process" evidence=IEA]
InterPro:IPR001878 InterPro:IPR004087 InterPro:IPR004088
Pfam:PF00013 Pfam:PF00098 PROSITE:PS50084 PROSITE:PS50158
SMART:SM00322 SMART:SM00343 GO:GO:0033327 GO:GO:0050810
GO:GO:0046872 GO:GO:0008270 GO:GO:0003723 GO:GO:0048662
Gene3D:4.10.60.10 GO:GO:0022402 GO:GO:0030238 EMBL:AP001462
UniGene:Hs.502829 HGNC:HGNC:12950 HOVERGEN:HBG063318 ChiTaRS:SF1
EMBL:AK301803 IPI:IPI00386118 SMR:B4DX42 STRING:B4DX42
Ensembl:ENST00000422298 UCSC:uc010rnm.2 Uniprot:B4DX42
Length = 433
Score = 97 (39.2 bits), Expect = 0.00035, P = 0.00035
Identities = 32/76 (42%), Positives = 39/76 (51%)
Query: 28 KVEIKDKPGYEHLNEPLHMLVEAEFPEVIINSCLDHAVAILENLLKP---VDESLDHYKK 84
KV KD +EPLH LV A E + AV + N+LK E + +K
Sbjct: 72 KVGRKDGQMLPGEDEPLHALVTANTMENV-----KKAVEQIRNILKQGIETPEDQNDLRK 126
Query: 85 QQLRELAILNGTLREE 100
QLRELA LNGTLRE+
Sbjct: 127 MQLRELARLNGTLRED 142
>UNIPROTKB|H0YAQ1 [details] [associations]
symbol:KHDRBS3 "KH domain-containing, RNA-binding, signal
transduction-associated protein 3" species:9606 "Homo sapiens"
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] GO:GO:0005634 HGNC:HGNC:18117 EMBL:AC040914
EMBL:AC104371 Ensembl:ENST00000524282 Uniprot:H0YAQ1
Length = 195
Score = 90 (36.7 bits), Expect = 0.00047, P = 0.00047
Identities = 22/59 (37%), Positives = 34/59 (57%)
Query: 37 YEHLNEPLHMLVEAEFPEVIINSCLDHAVAILENLLKPVDESLDHYKKQQLRELAILNG 95
Y HLN+ LH+L+E P + + HA+ ++ L P D + D ++ QL+EL LNG
Sbjct: 35 YFHLNDDLHVLIEVFAPPAEAYARMGHALEEIKKFLIP-DYN-DEIRQAQLQELTYLNG 91
>UNIPROTKB|H0YAQ3 [details] [associations]
symbol:KHDRBS3 "KH domain-containing, RNA-binding, signal
transduction-associated protein 3" species:9606 "Homo sapiens"
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] GO:GO:0005634 HGNC:HGNC:18117 EMBL:AC040914
EMBL:AC104371 Ensembl:ENST00000517859 Uniprot:H0YAQ3
Length = 196
Score = 90 (36.7 bits), Expect = 0.00048, P = 0.00048
Identities = 22/59 (37%), Positives = 34/59 (57%)
Query: 37 YEHLNEPLHMLVEAEFPEVIINSCLDHAVAILENLLKPVDESLDHYKKQQLRELAILNG 95
Y HLN+ LH+L+E P + + HA+ ++ L P D + D ++ QL+EL LNG
Sbjct: 45 YFHLNDDLHVLIEVFAPPAEAYARMGHALEEIKKFLIP-DYN-DEIRQAQLQELTYLNG 101
>UNIPROTKB|F1LM37 [details] [associations]
symbol:Sf1 "Protein Sf1" species:10116 "Rattus norvegicus"
[GO:0003723 "RNA binding" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] InterPro:IPR001878 InterPro:IPR004087
InterPro:IPR004088 Pfam:PF00013 Pfam:PF00098 PROSITE:PS50084
PROSITE:PS50158 SMART:SM00322 SMART:SM00343 RGD:620645
GO:GO:0046872 GO:GO:0008270 GO:GO:0003723 Gene3D:4.10.60.10
GeneTree:ENSGT00550000074434 IPI:IPI00558327
Ensembl:ENSRNOT00000044866 ArrayExpress:F1LM37 Uniprot:F1LM37
Length = 548
Score = 97 (39.2 bits), Expect = 0.00048, P = 0.00048
Identities = 32/76 (42%), Positives = 39/76 (51%)
Query: 28 KVEIKDKPGYEHLNEPLHMLVEAEFPEVIINSCLDHAVAILENLLKP---VDESLDHYKK 84
KV KD +EPLH LV A E + AV + N+LK E + +K
Sbjct: 187 KVGRKDGQMLPGEDEPLHALVTANTMENV-----KKAVEQIRNILKQGIETPEDQNDLRK 241
Query: 85 QQLRELAILNGTLREE 100
QLRELA LNGTLRE+
Sbjct: 242 MQLRELARLNGTLRED 257
>UNIPROTKB|E2RRT4 [details] [associations]
symbol:SF1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] InterPro:IPR001878
InterPro:IPR004087 InterPro:IPR004088 Pfam:PF00013 Pfam:PF00098
PROSITE:PS50084 PROSITE:PS50158 SMART:SM00322 SMART:SM00343
GO:GO:0046872 GO:GO:0008270 GO:GO:0003723
GeneTree:ENSGT00550000074434 OMA:GDGPSHE EMBL:AAEX03011644
ProteinModelPortal:E2RRT4 Ensembl:ENSCAFT00000022618 Uniprot:E2RRT4
Length = 638
Score = 97 (39.2 bits), Expect = 0.00059, P = 0.00059
Identities = 32/76 (42%), Positives = 39/76 (51%)
Query: 28 KVEIKDKPGYEHLNEPLHMLVEAEFPEVIINSCLDHAVAILENLLKP---VDESLDHYKK 84
KV KD +EPLH LV A E + AV + N+LK E + +K
Sbjct: 187 KVGRKDGQMLPGEDEPLHALVTANTMENV-----KKAVEQIRNILKQGIETPEDQNDLRK 241
Query: 85 QQLRELAILNGTLREE 100
QLRELA LNGTLRE+
Sbjct: 242 MQLRELARLNGTLRED 257
>UNIPROTKB|A2VDM7 [details] [associations]
symbol:SF1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0050810 "regulation of steroid biosynthetic process"
evidence=IEA] [GO:0033327 "Leydig cell differentiation"
evidence=IEA] [GO:0030238 "male sex determination" evidence=IEA]
[GO:0022402 "cell cycle process" evidence=IEA] [GO:0005681
"spliceosomal complex" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
InterPro:IPR001878 InterPro:IPR004087 InterPro:IPR004088
Pfam:PF00013 Pfam:PF00098 PROSITE:PS50084 PROSITE:PS50158
SMART:SM00322 SMART:SM00343 GO:GO:0033327 GO:GO:0050810
GO:GO:0046872 GO:GO:0008270 GO:GO:0005681 GO:GO:0003723
eggNOG:COG5176 KO:K13095 GeneTree:ENSGT00550000074434 GO:GO:0022402
GO:GO:0030238 CTD:7536 HOVERGEN:HBG063318 OMA:GDGPSHE
EMBL:DAAA02063538 EMBL:BC133313 IPI:IPI00729661 IPI:IPI00999378
RefSeq:NP_001075083.1 UniGene:Bt.7991 SMR:A2VDM7 STRING:A2VDM7
Ensembl:ENSBTAT00000001376 GeneID:541229 KEGG:bta:541229
NextBio:20879080 Uniprot:A2VDM7
Length = 639
Score = 97 (39.2 bits), Expect = 0.00059, P = 0.00059
Identities = 32/76 (42%), Positives = 39/76 (51%)
Query: 28 KVEIKDKPGYEHLNEPLHMLVEAEFPEVIINSCLDHAVAILENLLKP---VDESLDHYKK 84
KV KD +EPLH LV A E + AV + N+LK E + +K
Sbjct: 187 KVGRKDGQMLPGEDEPLHALVTANTMENV-----KKAVEQIRNILKQGIETPEDQNDLRK 241
Query: 85 QQLRELAILNGTLREE 100
QLRELA LNGTLRE+
Sbjct: 242 MQLRELARLNGTLRED 257
>UNIPROTKB|Q15637 [details] [associations]
symbol:SF1 "Splicing factor 1" species:9606 "Homo sapiens"
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0022402 "cell cycle process" evidence=IEA] [GO:0030238 "male
sex determination" evidence=IEA] [GO:0033327 "Leydig cell
differentiation" evidence=IEA] [GO:0050810 "regulation of steroid
biosynthetic process" evidence=IEA] [GO:0003723 "RNA binding"
evidence=TAS] [GO:0000245 "spliceosomal complex assembly"
evidence=NAS] [GO:0005840 "ribosome" evidence=NAS] [GO:0003676
"nucleic acid binding" evidence=NAS] [GO:0005634 "nucleus"
evidence=IDA;NAS] [GO:0003714 "transcription corepressor activity"
evidence=TAS] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=IC] [GO:0005681 "spliceosomal complex" evidence=IDA]
[GO:0000389 "mRNA 3'-splice site recognition" evidence=TAS]
[GO:0005730 "nucleolus" evidence=IDA] InterPro:IPR001878
InterPro:IPR004087 InterPro:IPR004088 Pfam:PF00013 Pfam:PF00098
PROSITE:PS50084 PROSITE:PS50158 SMART:SM00322 SMART:SM00343
GO:GO:0005634 GO:GO:0003714 GO:GO:0006355 GO:GO:0033327
GO:GO:0050810 GO:GO:0046872 GO:GO:0008270 GO:GO:0006351
GO:GO:0005681 GO:GO:0003723 GO:GO:0005840 GO:GO:0048662
eggNOG:COG5176 KO:K13095 GO:GO:0022402 GO:GO:0030238 GO:GO:0000389
EMBL:AP001462 EMBL:Y08765 EMBL:Y08766 EMBL:L49345 EMBL:L49380
EMBL:D26120 EMBL:AK293753 EMBL:BC000773 EMBL:BC008080 EMBL:BC008724
EMBL:BC011657 EMBL:BC020217 EMBL:BC038446 EMBL:AJ000051
EMBL:AJ000052 IPI:IPI00294627 IPI:IPI00386114 IPI:IPI00386117
IPI:IPI00386119 IPI:IPI00386120 IPI:IPI00852591 IPI:IPI00941553
PIR:G02919 RefSeq:NP_001171501.1 RefSeq:NP_001171502.1
RefSeq:NP_004621.2 RefSeq:NP_973724.1 RefSeq:NP_973726.2
RefSeq:NP_973727.1 UniGene:Hs.502829 PDB:1K1G PDB:4FXW PDB:4FXX
PDBsum:1K1G PDBsum:4FXW PDBsum:4FXX ProteinModelPortal:Q15637
SMR:Q15637 DIP:DIP-29410N IntAct:Q15637 MINT:MINT-1582417
STRING:Q15637 DMDM:38258418 PaxDb:Q15637 PRIDE:Q15637 DNASU:7536
Ensembl:ENST00000227503 Ensembl:ENST00000334944
Ensembl:ENST00000377387 Ensembl:ENST00000377390
Ensembl:ENST00000377394 Ensembl:ENST00000433274 GeneID:7536
KEGG:hsa:7536 UCSC:uc001oaz.2 UCSC:uc001oba.2 UCSC:uc001obb.2
UCSC:uc001obc.2 UCSC:uc001obd.2 CTD:7536 GeneCards:GC11M064532
HGNC:HGNC:12950 HPA:HPA018883 MIM:601516 neXtProt:NX_Q15637
PharmGKB:PA37533 HOVERGEN:HBG063318 ChiTaRS:SF1
EvolutionaryTrace:Q15637 GenomeRNAi:7536 NextBio:29487
ArrayExpress:Q15637 Bgee:Q15637 CleanEx:HS_SF1
Genevestigator:Q15637 GermOnline:ENSG00000168066 Uniprot:Q15637
Length = 639
Score = 97 (39.2 bits), Expect = 0.00059, P = 0.00059
Identities = 32/76 (42%), Positives = 39/76 (51%)
Query: 28 KVEIKDKPGYEHLNEPLHMLVEAEFPEVIINSCLDHAVAILENLLKP---VDESLDHYKK 84
KV KD +EPLH LV A E + AV + N+LK E + +K
Sbjct: 187 KVGRKDGQMLPGEDEPLHALVTANTMENV-----KKAVEQIRNILKQGIETPEDQNDLRK 241
Query: 85 QQLRELAILNGTLREE 100
QLRELA LNGTLRE+
Sbjct: 242 MQLRELARLNGTLRED 257
>UNIPROTKB|F1RQR0 [details] [associations]
symbol:SF1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0050810 "regulation of steroid biosynthetic process"
evidence=IEA] [GO:0033327 "Leydig cell differentiation"
evidence=IEA] [GO:0030238 "male sex determination" evidence=IEA]
[GO:0022402 "cell cycle process" evidence=IEA] [GO:0005681
"spliceosomal complex" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
InterPro:IPR001878 InterPro:IPR004087 InterPro:IPR004088
Pfam:PF00013 Pfam:PF00098 PROSITE:PS50084 PROSITE:PS50158
SMART:SM00322 SMART:SM00343 GO:GO:0033327 GO:GO:0050810
GO:GO:0046872 GO:GO:0008270 GO:GO:0005681 GO:GO:0003723
GeneTree:ENSGT00550000074434 GO:GO:0022402 GO:GO:0030238
OMA:GDGPSHE EMBL:FP101995 Ensembl:ENSSSCT00000014232
ArrayExpress:F1RQR0 Uniprot:F1RQR0
Length = 639
Score = 97 (39.2 bits), Expect = 0.00059, P = 0.00059
Identities = 32/76 (42%), Positives = 39/76 (51%)
Query: 28 KVEIKDKPGYEHLNEPLHMLVEAEFPEVIINSCLDHAVAILENLLKP---VDESLDHYKK 84
KV KD +EPLH LV A E + AV + N+LK E + +K
Sbjct: 187 KVGRKDGQMLPGEDEPLHALVTANTMENV-----KKAVEQIRNILKQGIETPEDQNDLRK 241
Query: 85 QQLRELAILNGTLREE 100
QLRELA LNGTLRE+
Sbjct: 242 MQLRELARLNGTLRED 257
>FB|FBgn0025571 [details] [associations]
symbol:SF1 "Splicing factor 1" species:7227 "Drosophila
melanogaster" [GO:0005634 "nucleus" evidence=IDA] [GO:0005681
"spliceosomal complex" evidence=ISS;NAS] [GO:0000398 "mRNA
splicing, via spliceosome" evidence=IC;ISS;NAS] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0071011 "precatalytic spliceosome" evidence=IDA] [GO:0002121
"inter-male aggressive behavior" evidence=IMP] [GO:0007476
"imaginal disc-derived wing morphogenesis" evidence=IMP]
[GO:0022008 "neurogenesis" evidence=IMP] InterPro:IPR001878
InterPro:IPR004087 InterPro:IPR004088 Pfam:PF00013 PROSITE:PS50084
PROSITE:PS50158 SMART:SM00322 SMART:SM00343 EMBL:AE014297
GO:GO:0022008 GO:GO:0008270 GO:GO:0003723 GO:GO:0002121
Gene3D:4.10.60.10 SUPFAM:SSF57756 GO:GO:0007476 GO:GO:0071011
GO:GO:0000398 HSSP:Q9BW01 KO:K13095 GeneTree:ENSGT00550000074434
CTD:7536 ChiTaRS:SF1 OMA:PPLMPWM FlyBase:FBgn0025571 EMBL:BT031265
RefSeq:NP_524654.2 UniGene:Dm.3761 SMR:Q9VEJ1 MINT:MINT-896516
STRING:Q9VEJ1 EnsemblMetazoa:FBtr0083456 GeneID:43912
KEGG:dme:Dmel_CG5836 UCSC:CG5836-RA InParanoid:Q9VEJ1
GenomeRNAi:43912 NextBio:836343 Uniprot:Q9VEJ1
Length = 787
Score = 98 (39.6 bits), Expect = 0.00060, P = 0.00060
Identities = 27/72 (37%), Positives = 38/72 (52%)
Query: 28 KVEIKDKPGYEHLNEPLHMLVEAEFPEVIINSCLDHAVAILENLLKPVDESLDHYKKQQL 87
KV KD +EPLH + A PE + +D ++ ++ V E + ++ QL
Sbjct: 442 KVGRKDGQPLPGEDEPLHAFITAPNPEAV-RKAVDKIKDVIRQGIE-VPEGHNDLRRMQL 499
Query: 88 RELAILNGTLRE 99
RELA LNGTLRE
Sbjct: 500 RELAQLNGTLRE 511
>MGI|MGI:1095403 [details] [associations]
symbol:Sf1 "splicing factor 1" species:10090 "Mus musculus"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0003723 "RNA
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=ISS]
[GO:0005681 "spliceosomal complex" evidence=ISO] [GO:0005737
"cytoplasm" evidence=ISS] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0006397 "mRNA
processing" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA] [GO:0022402
"cell cycle process" evidence=IGI] [GO:0030238 "male sex
determination" evidence=IGI] [GO:0033327 "Leydig cell
differentiation" evidence=IGI] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0048662 "negative regulation of smooth muscle
cell proliferation" evidence=ISO] [GO:0050810 "regulation of
steroid biosynthetic process" evidence=IGI] InterPro:IPR001878
InterPro:IPR004087 InterPro:IPR004088 Pfam:PF00013 Pfam:PF00098
PROSITE:PS50084 PROSITE:PS50158 SMART:SM00322 SMART:SM00343
MGI:MGI:1095403 GO:GO:0005634 GO:GO:0005737 GO:GO:0006355
GO:GO:0008380 GO:GO:0033327 GO:GO:0050810 GO:GO:0046872
GO:GO:0008270 GO:GO:0006397 GO:GO:0006351 GO:GO:0005681
GO:GO:0003723 GO:GO:0048662 Gene3D:4.10.60.10 eggNOG:COG5176
GeneTree:ENSGT00550000074434 GO:GO:0022402 GO:GO:0030238
EMBL:AC127556 HOVERGEN:HBG063318 ChiTaRS:SF1 EMBL:X80159
EMBL:X85802 EMBL:Y08907 EMBL:Y12838 EMBL:AC167245 EMBL:BC009091
EMBL:BC055370 IPI:IPI00116284 IPI:IPI00387376 IPI:IPI01008154
UniGene:Mm.256422 ProteinModelPortal:Q64213 SMR:Q64213
STRING:Q64213 PhosphoSite:Q64213 PaxDb:Q64213 PRIDE:Q64213
Ensembl:ENSMUST00000131252 HOGENOM:HOG000237321 InParanoid:Q64213
OMA:GDGPSHE Bgee:Q64213 CleanEx:MM_SF1 Genevestigator:Q64213
GermOnline:ENSMUSG00000024949 Uniprot:Q64213
Length = 653
Score = 97 (39.2 bits), Expect = 0.00061, P = 0.00061
Identities = 32/76 (42%), Positives = 39/76 (51%)
Query: 28 KVEIKDKPGYEHLNEPLHMLVEAEFPEVIINSCLDHAVAILENLLKP---VDESLDHYKK 84
KV KD +EPLH LV A E + AV + N+LK E + +K
Sbjct: 187 KVGRKDGQMLPGEDEPLHALVTANTMENV-----KKAVEQIRNILKQGIETPEDQNDLRK 241
Query: 85 QQLRELAILNGTLREE 100
QLRELA LNGTLRE+
Sbjct: 242 MQLRELARLNGTLRED 257
>UNIPROTKB|F1LSC3 [details] [associations]
symbol:Sf1 "Protein Sf1" species:10116 "Rattus norvegicus"
[GO:0003723 "RNA binding" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] InterPro:IPR001878 InterPro:IPR004087
InterPro:IPR004088 Pfam:PF00013 Pfam:PF00098 PROSITE:PS50084
PROSITE:PS50158 SMART:SM00322 SMART:SM00343 RGD:620645
GO:GO:0033327 GO:GO:0050810 GO:GO:0046872 GO:GO:0008270
GO:GO:0005681 GO:GO:0003723 Gene3D:4.10.60.10
GeneTree:ENSGT00550000074434 GO:GO:0022402 GO:GO:0030238
IPI:IPI00561804 PRIDE:F1LSC3 Ensembl:ENSRNOT00000028628
ArrayExpress:F1LSC3 Uniprot:F1LSC3
Length = 653
Score = 97 (39.2 bits), Expect = 0.00061, P = 0.00061
Identities = 32/76 (42%), Positives = 39/76 (51%)
Query: 28 KVEIKDKPGYEHLNEPLHMLVEAEFPEVIINSCLDHAVAILENLLKP---VDESLDHYKK 84
KV KD +EPLH LV A E + AV + N+LK E + +K
Sbjct: 187 KVGRKDGQMLPGEDEPLHALVTANTMENV-----KKAVEQIRNILKQGIETPEDQNDLRK 241
Query: 85 QQLRELAILNGTLREE 100
QLRELA LNGTLRE+
Sbjct: 242 MQLRELARLNGTLRED 257
>ZFIN|ZDB-GENE-030131-2492 [details] [associations]
symbol:sf1 "splicing factor 1" species:7955 "Danio
rerio" [GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0060041 "retina development in camera-type eye"
evidence=IMP] InterPro:IPR001878 InterPro:IPR004087
InterPro:IPR004088 Pfam:PF00013 PROSITE:PS50158 SMART:SM00322
SMART:SM00343 ZFIN:ZDB-GENE-030131-2492 GO:GO:0008270 GO:GO:0003723
GO:GO:0060041 eggNOG:COG5176 HOVERGEN:HBG063318 OrthoDB:EOG4VHK6F
EMBL:BC163938 IPI:IPI00902082 UniGene:Dr.132180 STRING:B3DKQ7
HOGENOM:HOG000170299 ArrayExpress:B3DKQ7 Uniprot:B3DKQ7
Length = 663
Score = 97 (39.2 bits), Expect = 0.00062, P = 0.00062
Identities = 32/76 (42%), Positives = 39/76 (51%)
Query: 28 KVEIKDKPGYEHLNEPLHMLVEAEFPEVIINSCLDHAVAILENLLKP---VDESLDHYKK 84
KV KD +EPLH LV A E + AV + N+LK E + +K
Sbjct: 259 KVGRKDGQMLPGEDEPLHALVTANTMENV-----KKAVEQIRNILKQGIETPEDQNDLRK 313
Query: 85 QQLRELAILNGTLREE 100
QLRELA LNGTLRE+
Sbjct: 314 MQLRELARLNGTLRED 329
>UNIPROTKB|K7GNY3 [details] [associations]
symbol:KHDRBS3 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0003723 "RNA binding" evidence=IEA] InterPro:IPR004088
PROSITE:PS50084 GeneTree:ENSGT00550000074434 EMBL:CU151851
Ensembl:ENSSSCT00000035168 Uniprot:K7GNY3
Length = 242
Score = 90 (36.7 bits), Expect = 0.00077, P = 0.00077
Identities = 22/59 (37%), Positives = 34/59 (57%)
Query: 37 YEHLNEPLHMLVEAEFPEVIINSCLDHAVAILENLLKPVDESLDHYKKQQLRELAILNG 95
Y HLN+ LH+L+E P + + HA+ ++ L P D + D ++ QL+EL LNG
Sbjct: 49 YFHLNDDLHVLIEVFAPPAEAYARMGHALEEIKKFLIP-DYN-DEIRQAQLQELTYLNG 105
>SGD|S000004106 [details] [associations]
symbol:MSL5 "Component of the commitment complex"
species:4932 "Saccharomyces cerevisiae" [GO:0005634 "nucleus"
evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA] [GO:0003723
"RNA binding" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0006397 "mRNA processing" evidence=IEA] [GO:0000243 "commitment
complex" evidence=IDA] [GO:0045131 "pre-mRNA branch point binding"
evidence=IDA] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=IPI] [GO:0003676 "nucleic acid binding" evidence=IEA]
InterPro:IPR001878 InterPro:IPR004087 InterPro:IPR004088
Pfam:PF00013 Pfam:PF00098 PROSITE:PS50084 PROSITE:PS50158
SMART:SM00322 SMART:SM00343 InterPro:IPR013041 SGD:S000004106
GO:GO:0046872 GO:GO:0008270 EMBL:BK006945 EMBL:X89514
eggNOG:COG5082 Gene3D:4.10.60.10 SUPFAM:SSF57756 SUPFAM:SSF49348
EMBL:U53877 GO:GO:0000398 KO:K13095 GO:GO:0000243
HOGENOM:HOG000197271 OrthoDB:EOG4HQHTF EMBL:Z73288 PIR:S64953
RefSeq:NP_013217.1 PDB:3FMA PDBsum:3FMA ProteinModelPortal:Q12186
SMR:Q12186 DIP:DIP-991N IntAct:Q12186 MINT:MINT-489287
STRING:Q12186 PaxDb:Q12186 EnsemblFungi:YLR116W GeneID:850807
KEGG:sce:YLR116W CYGD:YLR116w GeneTree:ENSGT00550000074434
OMA:PPASHIS EvolutionaryTrace:Q12186 NextBio:967037
Genevestigator:Q12186 GermOnline:YLR116W GO:GO:0045131
Uniprot:Q12186
Length = 476
Score = 94 (38.1 bits), Expect = 0.00084, P = 0.00084
Identities = 26/69 (37%), Positives = 39/69 (56%)
Query: 35 PGYEHLNEPLHMLVEAEFPEVIINSCLDHAVAILENL-LKPVD--ESLDHYKKQQLRELA 91
PG + +PLH L+ A+ + I + + +N+ +K V E + K+ QLRELA
Sbjct: 206 PGAMNFEDPLHCLIIADSEDKI-----QKGIKVCQNIVIKAVTSPEGQNDLKRGQLRELA 260
Query: 92 ILNGTLREE 100
LNGTLRE+
Sbjct: 261 ELNGTLRED 269
>UNIPROTKB|E5RJZ9 [details] [associations]
symbol:KHDRBS3 "KH domain-containing, RNA-binding, signal
transduction-associated protein 3" species:9606 "Homo sapiens"
[GO:0003723 "RNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA]
InterPro:IPR004087 SMART:SM00322 GO:GO:0005634 GO:GO:0003723
HGNC:HGNC:18117 EMBL:AC040914 EMBL:AC104371 IPI:IPI01010991
ProteinModelPortal:E5RJZ9 SMR:E5RJZ9 Ensembl:ENST00000524199
ArrayExpress:E5RJZ9 Bgee:E5RJZ9 Uniprot:E5RJZ9
Length = 265
Score = 90 (36.7 bits), Expect = 0.00092, P = 0.00092
Identities = 22/59 (37%), Positives = 34/59 (57%)
Query: 37 YEHLNEPLHMLVEAEFPEVIINSCLDHAVAILENLLKPVDESLDHYKKQQLRELAILNG 95
Y HLN+ LH+L+E P + + HA+ ++ L P D + D ++ QL+EL LNG
Sbjct: 92 YFHLNDDLHVLIEVFAPPAEAYARMGHALEEIKKFLIP-DYN-DEIRQAQLQELTYLNG 148
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.317 0.136 0.394 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 127 113 0.00091 102 3 11 22 0.49 30
29 0.44 32
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 61
No. of states in DFA: 523 (56 KB)
Total size of DFA: 115 KB (2077 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 13.70u 0.15s 13.85t Elapsed: 00:00:00
Total cpu time: 13.70u 0.15s 13.85t Elapsed: 00:00:00
Start: Sat May 11 09:26:12 2013 End: Sat May 11 09:26:12 2013