Query 039634
Match_columns 127
No_of_seqs 109 out of 334
Neff 5.1
Searched_HMMs 13730
Date Mon Mar 25 20:06:40 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/039634.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/039634hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d2bl5a1 d.51.1.1 (A:1-134) Qua 100.0 1.2E-36 8.7E-41 223.9 4.0 97 2-104 30-131 (134)
2 d1k1ga_ d.51.1.1 (A:) RNA spli 100.0 6E-32 4.4E-36 195.6 7.3 86 2-98 31-122 (122)
3 d1tuaa2 d.51.1.1 (A:85-188) Hy 96.6 0.0019 1.4E-07 43.8 5.9 43 2-76 35-77 (104)
4 d1dtja_ d.51.1.1 (A:) Neuro-on 96.3 0.0032 2.3E-07 39.1 5.1 50 2-73 25-74 (74)
5 d1j4wa2 d.51.1.1 (A:104-174) F 96.3 0.004 2.9E-07 38.3 5.4 49 2-72 23-71 (71)
6 d1j4wa1 d.51.1.1 (A:1-74) Far 96.3 0.0027 2E-07 39.2 4.5 47 2-73 25-71 (74)
7 d1x4ma1 d.51.1.1 (A:8-88) Far 95.9 0.0088 6.4E-07 37.5 5.5 49 2-73 30-78 (81)
8 d1we8a_ d.51.1.1 (A:) Tudor an 95.8 0.0095 6.9E-07 39.1 5.7 49 2-73 37-85 (104)
9 d1x4na1 d.51.1.1 (A:8-86) Far 95.8 0.008 5.8E-07 37.5 5.1 47 2-73 30-76 (79)
10 d2ctma1 d.51.1.1 (A:8-88) Vigi 95.5 0.0074 5.4E-07 38.0 4.1 46 2-73 32-77 (81)
11 d2axya1 d.51.1.1 (A:11-81) Pol 95.4 0.0084 6.1E-07 36.8 4.1 45 2-73 26-70 (71)
12 d1zzka1 d.51.1.1 (A:11-85) HnR 95.4 0.012 8.5E-07 36.1 4.8 47 2-73 26-72 (75)
13 d2z0sa2 d.51.1.1 (A:148-234) E 95.1 0.012 9E-07 38.4 4.3 43 1-73 22-64 (87)
14 d2ctea1 d.51.1.1 (A:8-88) Vigi 95.0 0.0075 5.5E-07 37.9 2.8 45 2-73 32-76 (81)
15 d2ctka1 d.51.1.1 (A:8-98) Vigi 94.8 0.018 1.3E-06 36.8 4.5 45 2-73 32-76 (91)
16 d1wvna1 d.51.1.1 (A:5-74) Poly 94.5 0.028 2.1E-06 34.2 4.7 46 2-72 24-69 (70)
17 d2je6i3 d.51.1.1 (I:153-221) E 94.4 0.0023 1.7E-07 39.9 -0.8 43 1-73 22-64 (69)
18 d2ctla1 d.51.1.1 (A:8-91) Vigi 94.3 0.021 1.5E-06 35.9 3.8 48 2-73 32-79 (84)
19 d2ba0a3 d.51.1.1 (A:136-219) E 94.3 0.022 1.6E-06 36.5 3.9 43 1-74 22-64 (84)
20 d1viga_ d.51.1.1 (A:) Vigilin 94.3 0.046 3.4E-06 33.3 5.3 44 2-72 27-70 (71)
21 d1tuaa1 d.51.1.1 (A:1-84) Hypo 94.0 0.04 2.9E-06 35.4 4.7 47 2-73 25-71 (84)
22 d2cpqa1 d.51.1.1 (A:212-289) F 93.1 0.062 4.5E-06 33.8 4.4 44 2-73 30-73 (78)
23 d2ctja1 d.51.1.1 (A:8-89) Vigi 79.4 1.2 8.8E-05 27.0 4.1 45 2-73 32-77 (82)
24 d2ctfa1 d.51.1.1 (A:7-96) Vigi 79.2 1.4 0.0001 27.5 4.5 42 2-73 43-85 (90)
25 d1e3ha4 d.52.3.1 (A:579-632) P 77.3 0.22 1.6E-05 29.4 0.0 18 2-19 25-42 (54)
26 d1wjwa_ d.129.2.1 (A:) Phospho 67.1 9.1 0.00066 24.9 6.4 45 10-75 56-100 (112)
27 d1b9ma1 a.4.5.8 (A:-1-126) N-t 40.8 4 0.00029 26.1 0.9 18 2-19 53-70 (127)
28 d1nlta1 b.4.1.1 (A:110-138,A:2 38.8 16 0.0012 21.3 3.5 12 8-19 42-53 (74)
29 d1ixca1 a.4.5.37 (A:1-89) LysR 36.9 2.8 0.0002 25.8 -0.4 18 2-19 36-53 (89)
30 d1c3ga2 b.4.1.1 (A:260-349) He 35.6 10 0.00076 23.0 2.3 15 41-55 66-80 (90)
31 d2esna1 a.4.5.37 (A:3-91) Prob 31.5 6.6 0.00048 23.9 0.7 18 2-19 41-58 (89)
32 d1y9ua_ c.94.1.1 (A:) Ferric-b 30.7 8 0.00058 26.4 1.2 18 2-19 18-35 (318)
33 d2fgea2 d.185.1.1 (A:798-993) 27.9 31 0.0023 22.7 4.0 60 15-87 50-109 (196)
34 d2hpra_ d.94.1.1 (A:) Histidin 27.7 24 0.0017 21.5 3.0 46 5-53 24-69 (87)
35 d2ds5a1 g.39.1.11 (A:11-48) Cl 27.6 11 0.00082 20.2 1.2 25 44-69 14-38 (38)
36 d1nlta2 b.4.1.1 (A:258-337) Mi 26.0 39 0.0028 19.6 3.7 13 41-53 67-79 (80)
37 d1cm3a_ d.94.1.1 (A:) Histidin 24.1 53 0.0039 19.7 4.2 46 5-53 25-70 (85)
38 d1pcha_ d.94.1.1 (A:) Histidin 24.0 14 0.001 22.8 1.3 47 4-53 23-69 (88)
39 d1atga_ c.94.1.1 (A:) Molybdat 22.5 9.8 0.00071 24.5 0.3 19 2-20 18-36 (231)
40 d2ja9a2 d.51.1.1 (A:152-236) R 21.4 83 0.006 18.9 5.8 44 1-71 23-66 (85)
41 d3etja1 b.84.2.1 (A:277-355) N 20.7 44 0.0032 20.2 3.2 25 45-74 41-65 (79)
42 d1ptfa_ d.94.1.1 (A:) Histidin 20.6 22 0.0016 21.6 1.7 46 5-53 25-70 (87)
No 1
>d2bl5a1 d.51.1.1 (A:1-134) Quaking protein A (Xqua) {African clawed frog (Xenopus laevis) [TaxId: 8355]}
Probab=100.00 E-value=1.2e-36 Score=223.92 Aligned_cols=97 Identities=35% Similarity=0.476 Sum_probs=91.3
Q ss_pred chhhhhhcCcEEEEecCCCCCCccccccc-----cCCCCCCCCCCCCceEEEEecCcHHHHHHHHHHHHHHHHhhcCCCC
Q 039634 2 TPEVDLLIKFKVSINGCPYTYTSLSIKVE-----IKDKPGYEHLNEPLHMLVEAEFPEVIINSCLDHAVAILENLLKPVD 76 (127)
Q Consensus 2 ~K~LE~eTgcKI~IRGkG~~~~~~S~Kd~-----~~~~~~~eh~~epLHVlI~a~~~~~~~~~~l~~A~~~Ie~lL~p~~ 76 (127)
+|+||+||||||+||||| |+|++ .++.++|+|++|||||+|+|++++..|+.+|++|+++|+++|.|++
T Consensus 30 ~K~le~eTg~kI~IrGrG------S~k~~~~~~~~~~~~~~~~~~epLHv~I~a~~~~~~a~~kl~~A~~~I~~lL~p~~ 103 (134)
T d2bl5a1 30 AKQLEAETGCKIMVRGKG------SMRDKKKEEQNRGKPNWEHLNEDLHVLITVEDAQNRAELKLKRAVEEVKKLLVPAA 103 (134)
T ss_dssp HHHHHHHHSEEEEEESTT------SSCCHHHHHTSTTSHHHHTTTSCCEEEEEECSCCHHHHHHHHHHHHHHHHHSSCCS
T ss_pred HHHHHHHHCCEEEEEecC------CCcCccccccccCCCCCcCCCCCCEEEEEecCcHHHHHHHHHHHHHHHHHHcCCCc
Confidence 699999999999999999 99988 3567788999999999999999999999999999999999999999
Q ss_pred cchhHHHHHHHHHHHHHhCcccCCCCCC
Q 039634 77 ESLDHYKKQQLRELAILNGTLREESPSM 104 (127)
Q Consensus 77 e~~delK~~QL~eLA~lNGt~r~~~~~~ 104 (127)
+++|++|++||+|||.||||||+++...
T Consensus 104 e~~de~k~~QL~eLa~lNGt~r~~~~~~ 131 (134)
T d2bl5a1 104 EGEDSLKKMKLMELAILNGTYRDANLKS 131 (134)
T ss_dssp SSSSHHHHHHHTGGGSSSTTTSGGGGSC
T ss_pred cchHHHHHHHHHHHHHhcCccccccCCC
Confidence 9999999999999999999999988763
No 2
>d1k1ga_ d.51.1.1 (A:) RNA splicing factor 1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.97 E-value=6e-32 Score=195.55 Aligned_cols=86 Identities=40% Similarity=0.460 Sum_probs=77.5
Q ss_pred chhhhhhcCcEEEEecCCCCCCcccccccc---CCCCCCCCCCCCceEEEEecCcHHHHHHHHHHHHHHHHhhcC---CC
Q 039634 2 TPEVDLLIKFKVSINGCPYTYTSLSIKVEI---KDKPGYEHLNEPLHMLVEAEFPEVIINSCLDHAVAILENLLK---PV 75 (127)
Q Consensus 2 ~K~LE~eTgcKI~IRGkG~~~~~~S~Kd~~---~~~~~~eh~~epLHVlI~a~~~~~~~~~~l~~A~~~Ie~lL~---p~ 75 (127)
+|+||+||||||+||||| |+||+. .+.+.|.|++|||||+|+|++++ ++++|+++|++||. ++
T Consensus 31 ~K~Le~eTgckI~IrGrG------S~kd~~~~~~~~~~~~~~~epLHv~I~a~~~~-----~~~~A~~~i~~ll~~~~~~ 99 (122)
T d1k1ga_ 31 LKNIEKECNAKIMIRGKG------SVKEGKVGRKDGQMLPGEDEPLHALVTANTME-----NVKKAVEQIRNILKQGIET 99 (122)
T ss_dssp HHHHHHHSCCEEEEEEST------TSSSSSSSSCCCCCSCCSSCCEEEEEEESSHH-----HHHHHHHHHHHHHTTTTSC
T ss_pred HHHHHHHHCCEEEEEecC------CcccccccccCCCCCCCCCCCceEEEecCChh-----hHHHHHHHHHHHHHhcCCC
Confidence 699999999999999999 999873 34667889999999999999964 58999999999995 47
Q ss_pred CcchhHHHHHHHHHHHHHhCccc
Q 039634 76 DESLDHYKKQQLRELAILNGTLR 98 (127)
Q Consensus 76 ~e~~delK~~QL~eLA~lNGt~r 98 (127)
++++|++|++||+|||+||||||
T Consensus 100 ~e~~d~~k~~Ql~eLa~lnGt~r 122 (122)
T d1k1ga_ 100 PEDQNDLRKMQLRELARLNGTLR 122 (122)
T ss_dssp CTTSSGGGGGGGHHHHHHHTCCC
T ss_pred CCCchHHHHHHHHHHHHhcCcCC
Confidence 88899999999999999999997
No 3
>d1tuaa2 d.51.1.1 (A:85-188) Hypothetical protein APE0754 {Aeropyrum pernix [TaxId: 56636]}
Probab=96.64 E-value=0.0019 Score=43.76 Aligned_cols=43 Identities=9% Similarity=-0.018 Sum_probs=33.3
Q ss_pred chhhhhhcCcEEEEecCCCCCCccccccccCCCCCCCCCCCCceEEEEecCcHHHHHHHHHHHHHHHHhhcCCCC
Q 039634 2 TPEVDLLIKFKVSINGCPYTYTSLSIKVEIKDKPGYEHLNEPLHMLVEAEFPEVIINSCLDHAVAILENLLKPVD 76 (127)
Q Consensus 2 ~K~LE~eTgcKI~IRGkG~~~~~~S~Kd~~~~~~~~eh~~epLHVlI~a~~~~~~~~~~l~~A~~~Ie~lL~p~~ 76 (127)
.|.||++|||+|.|-|.+ |.|.| +++ .++.|.+.|+.|+..+.
T Consensus 35 ik~Ie~~Tg~~I~I~d~~--------------------------v~iig-~~e-----~i~~A~~~Ie~li~~~e 77 (104)
T d1tuaa2 35 RRTIEEMTDTYINVGEYE--------------------------VAIIG-DYE-----RAMAAKQAIEMLAEGRM 77 (104)
T ss_dssp HHHHHHHHTCEEEECSSE--------------------------EEEEE-EHH-----HHHHHHHHHHHHHTTCC
T ss_pred HHHHHHHHCCeEEEeCCe--------------------------EEEEE-Cch-----hHHHHHHHHHHHHcCCC
Confidence 578999999999996643 45666 332 48999999999998654
No 4
>d1dtja_ d.51.1.1 (A:) Neuro-oncological ventral antigen 2, nova-2, KH3 {Human (Homo sapiens) [TaxId: 9606]}
Probab=96.34 E-value=0.0032 Score=39.06 Aligned_cols=50 Identities=14% Similarity=0.205 Sum_probs=35.6
Q ss_pred chhhhhhcCcEEEEecCCCCCCccccccccCCCCCCCCCCCCceEEEEecCcHHHHHHHHHHHHHHHHhhcC
Q 039634 2 TPEVDLLIKFKVSINGCPYTYTSLSIKVEIKDKPGYEHLNEPLHMLVEAEFPEVIINSCLDHAVAILENLLK 73 (127)
Q Consensus 2 ~K~LE~eTgcKI~IRGkG~~~~~~S~Kd~~~~~~~~eh~~epLHVlI~a~~~~~~~~~~l~~A~~~Ie~lL~ 73 (127)
+|+|+++|||+|.|...+ ... ++ ..+--|.|+|. ++ .+++|.++|.+.|.
T Consensus 25 Ik~I~~~sga~I~i~~~~------~~~------~~----~~~r~v~I~G~-~~-----~v~~A~~~I~~~is 74 (74)
T d1dtja_ 25 LVEYQELTGARIQISKKG------EFL------PG----TRNRRVTITGS-PA-----ATQAAQYLISQRVT 74 (74)
T ss_dssp HHHHHHHHCCEEEECCTT------CCS------TT----CCEEEEEEEES-HH-----HHHHHHHHHHHHCC
T ss_pred HHHHHHHcCCEEEEccCC------CCC------CC----CCceEEEEEeC-HH-----HHHHHHHHHHHHcC
Confidence 689999999999997755 110 11 12235888885 33 48999999998873
No 5
>d1j4wa2 d.51.1.1 (A:104-174) Far upstream binding element, FBP {Human (Homo sapiens) [TaxId: 9606]}
Probab=96.31 E-value=0.004 Score=38.31 Aligned_cols=49 Identities=12% Similarity=0.232 Sum_probs=33.4
Q ss_pred chhhhhhcCcEEEEecCCCCCCccccccccCCCCCCCCCCCCceEEEEecCcHHHHHHHHHHHHHHHHhhc
Q 039634 2 TPEVDLLIKFKVSINGCPYTYTSLSIKVEIKDKPGYEHLNEPLHMLVEAEFPEVIINSCLDHAVAILENLL 72 (127)
Q Consensus 2 ~K~LE~eTgcKI~IRGkG~~~~~~S~Kd~~~~~~~~eh~~epLHVlI~a~~~~~~~~~~l~~A~~~Ie~lL 72 (127)
+|+|+++|||+|.|-... . +. . .+.+=.|.|+|. ++ .+++|.++|.++|
T Consensus 23 Ik~I~~~sga~I~i~~~~------~--------~~-~-~~~~r~v~I~G~-~~-----~v~~A~~~I~e~i 71 (71)
T d1j4wa2 23 IKSISQQSGARIELQRNP------P--------PN-A-DPNMKLFTIRGT-PQ-----QIDYARQLIEEKI 71 (71)
T ss_dssp HHHHHHHHCCEEEEECCC------T--------TT-S-CTTEEEEEEECC-HH-----HHHHHHHHHHHHC
T ss_pred hHHHHhhcCcEEEEeecC------C--------CC-C-CCCeEEEEEEeC-HH-----HHHHHHHHHHhhC
Confidence 689999999999996543 1 10 1 112235778884 33 4899999998875
No 6
>d1j4wa1 d.51.1.1 (A:1-74) Far upstream binding element, FBP {Human (Homo sapiens) [TaxId: 9606]}
Probab=96.27 E-value=0.0027 Score=39.25 Aligned_cols=47 Identities=13% Similarity=0.190 Sum_probs=33.9
Q ss_pred chhhhhhcCcEEEEecCCCCCCccccccccCCCCCCCCCCCCceEEEEecCcHHHHHHHHHHHHHHHHhhcC
Q 039634 2 TPEVDLLIKFKVSINGCPYTYTSLSIKVEIKDKPGYEHLNEPLHMLVEAEFPEVIINSCLDHAVAILENLLK 73 (127)
Q Consensus 2 ~K~LE~eTgcKI~IRGkG~~~~~~S~Kd~~~~~~~~eh~~epLHVlI~a~~~~~~~~~~l~~A~~~Ie~lL~ 73 (127)
+|+|+++|||+|.|.... ++ ..+--|.|+|. ++ .+.+|.++|+++|.
T Consensus 25 I~~I~~~tga~I~i~~~~---------------~~----~~~r~v~I~G~-~~-----~v~~A~~~I~~~i~ 71 (74)
T d1j4wa1 25 IKKIQNDAGVRIQFKPDD---------------GT----TPERIAQITGP-PD-----RAQHAAEIITDLLR 71 (74)
T ss_dssp HHHHHHHHCCEEEEECCT---------------TS----CSEEEEEEEEC-HH-----HHHHHHHHHHHHHH
T ss_pred HHHHHHHcCCEEEeccCC---------------CC----CCeeEEEEEeC-HH-----HHHHHHHHHHHHHH
Confidence 689999999999997644 10 11134778885 33 38999999998875
No 7
>d1x4ma1 d.51.1.1 (A:8-88) Far upstream binding element, FBP {Mouse (Mus musculus) [TaxId: 10090]}
Probab=95.86 E-value=0.0088 Score=37.54 Aligned_cols=49 Identities=8% Similarity=0.060 Sum_probs=35.3
Q ss_pred chhhhhhcCcEEEEecCCCCCCccccccccCCCCCCCCCCCCceEEEEecCcHHHHHHHHHHHHHHHHhhcC
Q 039634 2 TPEVDLLIKFKVSINGCPYTYTSLSIKVEIKDKPGYEHLNEPLHMLVEAEFPEVIINSCLDHAVAILENLLK 73 (127)
Q Consensus 2 ~K~LE~eTgcKI~IRGkG~~~~~~S~Kd~~~~~~~~eh~~epLHVlI~a~~~~~~~~~~l~~A~~~Ie~lL~ 73 (127)
+|+|+++|||+|.|.-.. +.. .+.+=+|.|+|.- + .|++|.++|+++|.
T Consensus 30 Ik~I~~~tga~I~i~~~~---------------~~~--~~~~r~v~I~G~~-~-----~v~~A~~~I~~~i~ 78 (81)
T d1x4ma1 30 IKQLQERAGVKMVMIQDG---------------PQN--TGADKPLRITGDP-Y-----KVQQAKEMVLELIR 78 (81)
T ss_dssp HHHHHHHHTSEEEECCSC---------------CCS--SCSCEEEEEEECT-T-----THHHHHHHHHHHHC
T ss_pred HHHHHHHhCCeEEEccCC---------------CCC--CCCceEEEEEeCH-H-----HHHHHHHHHHHHHH
Confidence 689999999999996433 111 1123478899865 3 38999999999885
No 8
>d1we8a_ d.51.1.1 (A:) Tudor and KH domain containing protein, Tdrkh {Mouse (Mus musculus) [TaxId: 10090]}
Probab=95.79 E-value=0.0095 Score=39.05 Aligned_cols=49 Identities=8% Similarity=-0.006 Sum_probs=34.6
Q ss_pred chhhhhhcCcEEEEecCCCCCCccccccccCCCCCCCCCCCCceEEEEecCcHHHHHHHHHHHHHHHHhhcC
Q 039634 2 TPEVDLLIKFKVSINGCPYTYTSLSIKVEIKDKPGYEHLNEPLHMLVEAEFPEVIINSCLDHAVAILENLLK 73 (127)
Q Consensus 2 ~K~LE~eTgcKI~IRGkG~~~~~~S~Kd~~~~~~~~eh~~epLHVlI~a~~~~~~~~~~l~~A~~~Ie~lL~ 73 (127)
+|+|+++|||+|.|.-.+ . .. ...+=-|.|+| +++ .+.+|+.+|+++|.
T Consensus 37 Ik~I~~~tga~I~i~~~~------~---------~~--~~~~r~v~I~G-~~~-----~v~~A~~~I~~~i~ 85 (104)
T d1we8a_ 37 IRSICKASGAKITCDKES------E---------GT--LLLSRLIKISG-TQK-----EVAAAKHLILEKVS 85 (104)
T ss_dssp HHHHHHHHCCEEEECCSS------C---------CS--SSSEEEEEEEE-EHH-----HHHHHHHHHHHHHH
T ss_pred hHHHHHHcCCEEEECCCC------C---------CC--CCCccEEEEEe-CHH-----HHHHHHHHHHHHHh
Confidence 689999999999996544 1 00 01112477888 433 48999999999996
No 9
>d1x4na1 d.51.1.1 (A:8-86) Far upstream binding element, FBP {Mouse (Mus musculus) [TaxId: 10090]}
Probab=95.79 E-value=0.008 Score=37.45 Aligned_cols=47 Identities=15% Similarity=0.246 Sum_probs=33.6
Q ss_pred chhhhhhcCcEEEEecCCCCCCccccccccCCCCCCCCCCCCceEEEEecCcHHHHHHHHHHHHHHHHhhcC
Q 039634 2 TPEVDLLIKFKVSINGCPYTYTSLSIKVEIKDKPGYEHLNEPLHMLVEAEFPEVIINSCLDHAVAILENLLK 73 (127)
Q Consensus 2 ~K~LE~eTgcKI~IRGkG~~~~~~S~Kd~~~~~~~~eh~~epLHVlI~a~~~~~~~~~~l~~A~~~Ie~lL~ 73 (127)
+++|+++|||+|.|.-.. ++ +.+=-|.|+|. ++ .+++|.++|.++|.
T Consensus 30 i~~I~~~tg~~I~i~~~~---------------~~----~~~r~v~I~G~-~~-----~v~~A~~~I~~~i~ 76 (79)
T d1x4na1 30 ISRIQQESGCKIQIAPDS---------------GG----LPERSCMLTGT-PE-----SVQSAKRLLDQIVE 76 (79)
T ss_dssp HHHHHHHSCCEEEECSCC---------------TT----CSEEEEEEEEC-HH-----HHHHHHHHHHHHHH
T ss_pred HHHHHHHhCCEEEEcCCC---------------CC----CCceEEEEEeC-HH-----HHHHHHHHHHHHHH
Confidence 689999999999995422 11 11134888884 43 48999999998875
No 10
>d2ctma1 d.51.1.1 (A:8-88) Vigilin {Human (Homo sapiens) [TaxId: 9606]}
Probab=95.50 E-value=0.0074 Score=37.99 Aligned_cols=46 Identities=15% Similarity=0.169 Sum_probs=31.2
Q ss_pred chhhhhhcCcEEEEecCCCCCCccccccccCCCCCCCCCCCCceEEEEecCcHHHHHHHHHHHHHHHHhhcC
Q 039634 2 TPEVDLLIKFKVSINGCPYTYTSLSIKVEIKDKPGYEHLNEPLHMLVEAEFPEVIINSCLDHAVAILENLLK 73 (127)
Q Consensus 2 ~K~LE~eTgcKI~IRGkG~~~~~~S~Kd~~~~~~~~eh~~epLHVlI~a~~~~~~~~~~l~~A~~~Ie~lL~ 73 (127)
+++|+++|||+|.|--.+ + + .+=-|.|+|+. +.+++|.++|.+++.
T Consensus 32 i~~I~~~tg~~I~~p~~~------~--------~------~~~~v~I~G~~------~~V~~A~~~I~~i~~ 77 (81)
T d2ctma1 32 IRKIMDEFKVDIRFPQSG------A--------P------DPNCVTVTGLP------ENVEEAIDHILNLEE 77 (81)
T ss_dssp HHHHHHHHTCEEECCCTT------C--------S------CTTEEEEESCH------HHHHHHHHHHHHHHH
T ss_pred HHHHHHHhCCEEEeCCcc------C--------C------CCCEEEEeCCH------HHHHHHHHHHHHHHH
Confidence 689999999999985444 1 1 11247888753 237788888877653
No 11
>d2axya1 d.51.1.1 (A:11-81) Poly(RC)-binding protein 2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=95.45 E-value=0.0084 Score=36.81 Aligned_cols=45 Identities=11% Similarity=0.091 Sum_probs=31.9
Q ss_pred chhhhhhcCcEEEEecCCCCCCccccccccCCCCCCCCCCCCceEEEEecCcHHHHHHHHHHHHHHHHhhcC
Q 039634 2 TPEVDLLIKFKVSINGCPYTYTSLSIKVEIKDKPGYEHLNEPLHMLVEAEFPEVIINSCLDHAVAILENLLK 73 (127)
Q Consensus 2 ~K~LE~eTgcKI~IRGkG~~~~~~S~Kd~~~~~~~~eh~~epLHVlI~a~~~~~~~~~~l~~A~~~Ie~lL~ 73 (127)
+|+|+++|||+|.|--.+ ..| =-|.|+|. ++ .+.+|..+|.++|.
T Consensus 26 I~~I~~~tga~I~i~~~~--------------------~~e-r~v~I~G~-~~-----~v~~A~~~I~~~l~ 70 (71)
T d2axya1 26 VKKMREESGARINISEGN--------------------CPE-RIITLAGP-TN-----AIFKAFAMIIDKLE 70 (71)
T ss_dssp HHHHHHHHCCEEEECSSC--------------------CSE-EEEEEEEC-HH-----HHHHHHHHHHHHHH
T ss_pred HHHHHHHhCCEEEEcCCC--------------------CCc-ceEEEEEC-HH-----HHHHHHHHHHHHhc
Confidence 589999999999985433 111 13668884 33 48899999988764
No 12
>d1zzka1 d.51.1.1 (A:11-85) HnRNP K, KH3 {Human (Homo sapiens) [TaxId: 9606]}
Probab=95.45 E-value=0.012 Score=36.15 Aligned_cols=47 Identities=13% Similarity=0.144 Sum_probs=32.4
Q ss_pred chhhhhhcCcEEEEecCCCCCCccccccccCCCCCCCCCCCCceEEEEecCcHHHHHHHHHHHHHHHHhhcC
Q 039634 2 TPEVDLLIKFKVSINGCPYTYTSLSIKVEIKDKPGYEHLNEPLHMLVEAEFPEVIINSCLDHAVAILENLLK 73 (127)
Q Consensus 2 ~K~LE~eTgcKI~IRGkG~~~~~~S~Kd~~~~~~~~eh~~epLHVlI~a~~~~~~~~~~l~~A~~~Ie~lL~ 73 (127)
+|+|+++|||+|.|.-.. ++ .+ +--|.|+|. ++ .+++|..+|+++|.
T Consensus 26 I~~I~~~sga~I~i~~~~---------------~~---~~-~r~i~I~G~-~~-----~v~~A~~~I~~~i~ 72 (75)
T d1zzka1 26 IKQIRHESGASIKIDEPL---------------EG---SE-DRIITITGT-QD-----QIQNAQYLLQNSVK 72 (75)
T ss_dssp HHHHHHHHCCEEEECCTT---------------SC---SS-EEEEEEEEC-HH-----HHHHHHHHHHHHHH
T ss_pred HHHHHhhcCCeEEEccCC---------------CC---CC-ceEEEEEeC-HH-----HHHHHHHHHHHHHH
Confidence 589999999999995422 11 11 124778884 33 48899999988764
No 13
>d2z0sa2 d.51.1.1 (A:148-234) Exosome complex RNA-binding protein 1, ECR1 {Aeropyrum pernix [TaxId: 56636]}
Probab=95.13 E-value=0.012 Score=38.38 Aligned_cols=43 Identities=12% Similarity=0.090 Sum_probs=34.1
Q ss_pred CchhhhhhcCcEEEEecCCCCCCccccccccCCCCCCCCCCCCceEEEEecCcHHHHHHHHHHHHHHHHhhcC
Q 039634 1 MTPEVDLLIKFKVSINGCPYTYTSLSIKVEIKDKPGYEHLNEPLHMLVEAEFPEVIINSCLDHAVAILENLLK 73 (127)
Q Consensus 1 ~~K~LE~eTgcKI~IRGkG~~~~~~S~Kd~~~~~~~~eh~~epLHVlI~a~~~~~~~~~~l~~A~~~Ie~lL~ 73 (127)
|+|+|+.+|||+|.|-=.| .|.|.|+++.. +..|.+.|+.+..
T Consensus 22 ~ik~i~~~t~~~I~I~d~G-------------------------~V~I~g~~~~~-----~~~A~~~I~~I~~ 64 (87)
T d2z0sa2 22 MLKTLEEKTECKIFVARNG-------------------------RIHLECPNEDL-----EAIAVMAIKIIDE 64 (87)
T ss_dssp HHHHHHHHHCCEEEEETTT-------------------------EEEEECSCHHH-----HHHHHHHHHHHHH
T ss_pred HHHHHHHHHCCEEEECCCc-------------------------EEEEEeCCHHH-----HHHHHHHHHHHHH
Confidence 5789999999999992212 48899999654 7888999988865
No 14
>d2ctea1 d.51.1.1 (A:8-88) Vigilin {Human (Homo sapiens) [TaxId: 9606]}
Probab=94.96 E-value=0.0075 Score=37.95 Aligned_cols=45 Identities=9% Similarity=0.056 Sum_probs=32.1
Q ss_pred chhhhhhcCcEEEEecCCCCCCccccccccCCCCCCCCCCCCceEEEEecCcHHHHHHHHHHHHHHHHhhcC
Q 039634 2 TPEVDLLIKFKVSINGCPYTYTSLSIKVEIKDKPGYEHLNEPLHMLVEAEFPEVIINSCLDHAVAILENLLK 73 (127)
Q Consensus 2 ~K~LE~eTgcKI~IRGkG~~~~~~S~Kd~~~~~~~~eh~~epLHVlI~a~~~~~~~~~~l~~A~~~Ie~lL~ 73 (127)
+++|+++|||+|.|-..+ + .++ -|.|+|.. ..+++|++.|.+++.
T Consensus 32 i~~I~~~tg~~I~~p~~~------~--------------~~~-~v~I~G~~------~~v~~A~~~I~~iv~ 76 (81)
T d2ctea1 32 LQDLELKTATKIQIPRPD------D--------------PSN-QIKITGTK------EGIEKARHEVLLISA 76 (81)
T ss_dssp HHHHHHHTTCCCBCCCTT------S--------------SCC-EEEEEECH------HHHHHHHHHHHHHHH
T ss_pred HHHHHHHhCCEEEECCCC------C--------------CCC-EEEEEeCH------HHHHHHHHHHHHHHH
Confidence 578999999999985444 1 111 26788865 348999999988765
No 15
>d2ctka1 d.51.1.1 (A:8-98) Vigilin {Human (Homo sapiens) [TaxId: 9606]}
Probab=94.81 E-value=0.018 Score=36.76 Aligned_cols=45 Identities=13% Similarity=0.010 Sum_probs=33.9
Q ss_pred chhhhhhcCcEEEEecCCCCCCccccccccCCCCCCCCCCCCceEEEEecCcHHHHHHHHHHHHHHHHhhcC
Q 039634 2 TPEVDLLIKFKVSINGCPYTYTSLSIKVEIKDKPGYEHLNEPLHMLVEAEFPEVIINSCLDHAVAILENLLK 73 (127)
Q Consensus 2 ~K~LE~eTgcKI~IRGkG~~~~~~S~Kd~~~~~~~~eh~~epLHVlI~a~~~~~~~~~~l~~A~~~Ie~lL~ 73 (127)
+++|+++|||+|.|-..| + ++ --|.|+|+- +.+++|.+.|..++.
T Consensus 32 i~~I~~~tg~~I~~p~~~------~--------------~~-~~v~I~G~~------~~V~~A~~~I~~~v~ 76 (91)
T d2ctka1 32 IRKMMDEFEVNIHVPAPE------L--------------QS-DIIAITGLA------ANLDRAKAGLLERVK 76 (91)
T ss_dssp HHHHHHHTCCEEECCCTT------T--------------TC-CEEEEEECH------HHHHHHHHHHHHHHH
T ss_pred HHHHHHHhCCEEEECCCC------C--------------Cc-ceEEEECCH------HHHHHHHHHHHHHHH
Confidence 689999999999995444 1 11 258888853 348999999999886
No 16
>d1wvna1 d.51.1.1 (A:5-74) Poly(RC)-binding protein 1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=94.53 E-value=0.028 Score=34.24 Aligned_cols=46 Identities=11% Similarity=0.158 Sum_probs=32.1
Q ss_pred chhhhhhcCcEEEEecCCCCCCccccccccCCCCCCCCCCCCceEEEEecCcHHHHHHHHHHHHHHHHhhc
Q 039634 2 TPEVDLLIKFKVSINGCPYTYTSLSIKVEIKDKPGYEHLNEPLHMLVEAEFPEVIINSCLDHAVAILENLL 72 (127)
Q Consensus 2 ~K~LE~eTgcKI~IRGkG~~~~~~S~Kd~~~~~~~~eh~~epLHVlI~a~~~~~~~~~~l~~A~~~Ie~lL 72 (127)
+|+|+++|||+|.|.... ++ .++ ==|.|+|. + ..+++|..+|+..|
T Consensus 24 I~~I~~~tga~I~i~~~~---------------~~---~~~-r~v~I~G~-~-----~~v~~A~~~I~~~i 69 (70)
T d1wvna1 24 INEIRQMSGAQIKIANPV---------------EG---SSG-RQVTITGS-A-----ASISLAQYLINARL 69 (70)
T ss_dssp HHHHHHHHCCEEEECCCC---------------TT---CSE-EEEEEEEC-H-----HHHHHHHHHHHHHT
T ss_pred HHHHHHHcCcEEEEcCCC---------------CC---CCc-EEEEEEeC-H-----HHHHHHHHHHHHHc
Confidence 589999999999995422 11 111 23778885 3 34899999998876
No 17
>d2je6i3 d.51.1.1 (I:153-221) Exosome complex RNA-binding protein 1, ECR1 {Sulfolobus solfataricus [TaxId: 2287]}
Probab=94.39 E-value=0.0023 Score=39.94 Aligned_cols=43 Identities=2% Similarity=-0.066 Sum_probs=25.6
Q ss_pred CchhhhhhcCcEEEEecCCCCCCccccccccCCCCCCCCCCCCceEEEEecCcHHHHHHHHHHHHHHHHhhcC
Q 039634 1 MTPEVDLLIKFKVSINGCPYTYTSLSIKVEIKDKPGYEHLNEPLHMLVEAEFPEVIINSCLDHAVAILENLLK 73 (127)
Q Consensus 1 ~~K~LE~eTgcKI~IRGkG~~~~~~S~Kd~~~~~~~~eh~~epLHVlI~a~~~~~~~~~~l~~A~~~Ie~lL~ 73 (127)
++|+||++|||+|.| + .+ =-|.|+|.++.. ++.|.++|+.+..
T Consensus 22 ~Ik~i~~~tg~~I~i---~--------~~--------------g~v~I~g~~~~~-----v~~A~~~I~~i~~ 64 (69)
T d2je6i3 22 MYETLTSKSGCSIFV---A--------NN--------------GRIWATCPSRFS-----EEILIEAIRKIEN 64 (69)
T ss_dssp HHHHHHTTC---CEE---C--------TT--------------SEEEC-----CT-----TCCTHHHHTTTTT
T ss_pred HHHHHHHHHCCEEEE---c--------CC--------------CEEEEEeCCHHH-----HHHHHHHHHHHHH
Confidence 368999999999998 2 00 138888887654 7889999988765
No 18
>d2ctla1 d.51.1.1 (A:8-91) Vigilin {Human (Homo sapiens) [TaxId: 9606]}
Probab=94.30 E-value=0.021 Score=35.87 Aligned_cols=48 Identities=4% Similarity=0.007 Sum_probs=32.5
Q ss_pred chhhhhhcCcEEEEecCCCCCCccccccccCCCCCCCCCCCCceEEEEecCcHHHHHHHHHHHHHHHHhhcC
Q 039634 2 TPEVDLLIKFKVSINGCPYTYTSLSIKVEIKDKPGYEHLNEPLHMLVEAEFPEVIINSCLDHAVAILENLLK 73 (127)
Q Consensus 2 ~K~LE~eTgcKI~IRGkG~~~~~~S~Kd~~~~~~~~eh~~epLHVlI~a~~~~~~~~~~l~~A~~~Ie~lL~ 73 (127)
+|+|+++|||+|.|-..+ +. + .++. =|.|+|.- +.+++|..+|.+++.
T Consensus 32 i~~I~~~t~~~I~~~~~~------~~--------~---~~~~-~i~I~G~~------e~v~~A~~~I~~~i~ 79 (84)
T d2ctla1 32 ITQIRLEHDVNIQFPDKD------DG--------N---QPQD-QITITGYE------KNTEAARDAILRIVG 79 (84)
T ss_dssp HHHHHHHHTCEEECCCTT------TC--------S---SCSS-EEEEESCH------HHHHHHHHHHHHHHH
T ss_pred HHHHHHHhCCEEEECCCC------CC--------C---CCcc-eEEEECCH------HHHHHHHHHHHHHHH
Confidence 689999999999996555 11 0 1111 26788763 347888888888764
No 19
>d2ba0a3 d.51.1.1 (A:136-219) Exosome complex RNA-binding protein 1, ECR1 {Archaeoglobus fulgidus [TaxId: 2234]}
Probab=94.29 E-value=0.022 Score=36.52 Aligned_cols=43 Identities=7% Similarity=0.047 Sum_probs=32.7
Q ss_pred CchhhhhhcCcEEEEecCCCCCCccccccccCCCCCCCCCCCCceEEEEecCcHHHHHHHHHHHHHHHHhhcCC
Q 039634 1 MTPEVDLLIKFKVSINGCPYTYTSLSIKVEIKDKPGYEHLNEPLHMLVEAEFPEVIINSCLDHAVAILENLLKP 74 (127)
Q Consensus 1 ~~K~LE~eTgcKI~IRGkG~~~~~~S~Kd~~~~~~~~eh~~epLHVlI~a~~~~~~~~~~l~~A~~~Ie~lL~p 74 (127)
++|+|+++|||+|.|-=.| -|.|+|+ ++ .+++|.++|+.++.-
T Consensus 22 ~I~~I~~~tg~~I~i~~~g-------------------------~v~I~G~-~e-----~v~~A~~~I~~i~~e 64 (84)
T d2ba0a3 22 MIKLLKSELDVQIVVGQNG-------------------------LIWVNGD-RR-----KVSIAEEAIYLIEQE 64 (84)
T ss_dssp HHHHHHHHHTCEEEECTTS-------------------------EEEEESC-HH-----HHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHCCEEEECCCC-------------------------EEEEEeC-HH-----HHHHHHHHHHHHHHh
Confidence 3689999999999992111 3788884 33 389999999998874
No 20
>d1viga_ d.51.1.1 (A:) Vigilin {Human (Homo sapiens) [TaxId: 9606]}
Probab=94.27 E-value=0.046 Score=33.30 Aligned_cols=44 Identities=16% Similarity=0.072 Sum_probs=32.4
Q ss_pred chhhhhhcCcEEEEecCCCCCCccccccccCCCCCCCCCCCCceEEEEecCcHHHHHHHHHHHHHHHHhhc
Q 039634 2 TPEVDLLIKFKVSINGCPYTYTSLSIKVEIKDKPGYEHLNEPLHMLVEAEFPEVIINSCLDHAVAILENLL 72 (127)
Q Consensus 2 ~K~LE~eTgcKI~IRGkG~~~~~~S~Kd~~~~~~~~eh~~epLHVlI~a~~~~~~~~~~l~~A~~~Ie~lL 72 (127)
+++|+++|||+|.|-..+ + ++=-|.|+|.- +.+++|.++|.+|.
T Consensus 27 i~~I~~~tg~~I~i~~~~------~---------------~~~~v~I~G~~------~~v~~A~~~I~~i~ 70 (71)
T d1viga_ 27 INRIKDQYKVSVRIPPDS------E---------------KSNLIRIEGDP------QGVQQAKRELLELA 70 (71)
T ss_dssp HHHHHHHTCCEEECCCCC------S---------------SSEEEEEEESS------HHHHHHHHHHHHTC
T ss_pred HHHHHHHhCCEEEeCCCC------C---------------CCCEEEEECCH------HHHHHHHHHHHHHh
Confidence 588999999999995444 1 11148899864 34899999999874
No 21
>d1tuaa1 d.51.1.1 (A:1-84) Hypothetical protein APE0754 {Aeropyrum pernix [TaxId: 56636]}
Probab=93.99 E-value=0.04 Score=35.41 Aligned_cols=47 Identities=13% Similarity=0.092 Sum_probs=32.1
Q ss_pred chhhhhhcCcEEEEecCCCCCCccccccccCCCCCCCCCCCCceEEEEecCcHHHHHHHHHHHHHHHHhhcC
Q 039634 2 TPEVDLLIKFKVSINGCPYTYTSLSIKVEIKDKPGYEHLNEPLHMLVEAEFPEVIINSCLDHAVAILENLLK 73 (127)
Q Consensus 2 ~K~LE~eTgcKI~IRGkG~~~~~~S~Kd~~~~~~~~eh~~epLHVlI~a~~~~~~~~~~l~~A~~~Ie~lL~ 73 (127)
+|+||++|||+|.|-..+ -.|.|.+.+... ....+++|.++|..+..
T Consensus 25 Ik~i~~~tg~~I~Id~d~------------------------g~v~i~~~~~~~-~~~a~~~a~~iI~aI~r 71 (84)
T d1tuaa1 25 KAEIMRRTGTVITVDTEN------------------------SMVIVEPEAEGI-PPVNLMKAAEVVKAISL 71 (84)
T ss_dssp HHHHHHHHTEEEEEETTT------------------------TEEEEEESSTTS-CHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHCCEEEEEcCC------------------------CeEEEecCCccc-cHHHHHHHHHHHHHHhC
Confidence 689999999999996532 234455544322 13567889999988754
No 22
>d2cpqa1 d.51.1.1 (A:212-289) Fragile X mental retardation syndrome related protein 1, FXR1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=93.14 E-value=0.062 Score=33.78 Aligned_cols=44 Identities=9% Similarity=-0.040 Sum_probs=33.4
Q ss_pred chhhhhhcCcEEEEecCCCCCCccccccccCCCCCCCCCCCCceEEEEecCcHHHHHHHHHHHHHHHHhhcC
Q 039634 2 TPEVDLLIKFKVSINGCPYTYTSLSIKVEIKDKPGYEHLNEPLHMLVEAEFPEVIINSCLDHAVAILENLLK 73 (127)
Q Consensus 2 ~K~LE~eTgcKI~IRGkG~~~~~~S~Kd~~~~~~~~eh~~epLHVlI~a~~~~~~~~~~l~~A~~~Ie~lL~ 73 (127)
+++|+++|||+|.|--.. .=.|.|.|.+++. +++|.++|+.+..
T Consensus 30 I~~I~~~tGa~i~i~~~~-----------------------~g~v~I~g~~~ea-----v~~A~~~Ie~~~~ 73 (78)
T d2cpqa1 30 IQQARKVPGVTAIELDED-----------------------TGTFRIYGESADA-----VKKARGFLEFVED 73 (78)
T ss_dssp HHHHHTSTTEEEEEEETT-----------------------TTEEEEEESSHHH-----HHHHHHHHSCCCC
T ss_pred HHHHHHhcCcEEEEecCC-----------------------CceEEEEECCHHH-----HHHHHHHHHHhhe
Confidence 588999999999874311 1248899988654 8999999987654
No 23
>d2ctja1 d.51.1.1 (A:8-89) Vigilin {Human (Homo sapiens) [TaxId: 9606]}
Probab=79.37 E-value=1.2 Score=27.04 Aligned_cols=45 Identities=11% Similarity=-0.035 Sum_probs=29.9
Q ss_pred chhhhhh-cCcEEEEecCCCCCCccccccccCCCCCCCCCCCCceEEEEecCcHHHHHHHHHHHHHHHHhhcC
Q 039634 2 TPEVDLL-IKFKVSINGCPYTYTSLSIKVEIKDKPGYEHLNEPLHMLVEAEFPEVIINSCLDHAVAILENLLK 73 (127)
Q Consensus 2 ~K~LE~e-TgcKI~IRGkG~~~~~~S~Kd~~~~~~~~eh~~epLHVlI~a~~~~~~~~~~l~~A~~~Ie~lL~ 73 (127)
+++|+++ ++|+|.+--.| + ++ =-|.|+|+- ..+++|.++|.+++.
T Consensus 32 I~~I~~~~~~~~I~~~~~~------~--------------~~-~~v~I~G~~------~~v~~A~~~I~~~v~ 77 (82)
T d2ctja1 32 IRSIMEECGGVHIHFPVEG------S--------------GS-DTVVIRGPS------SDVEKAKKQLLHLAE 77 (82)
T ss_dssp HHHHHHHHTSCEEECCCTT------T--------------TC-CEEEEESCH------HHHHHHHHHHHHHHH
T ss_pred HHHHHHHcCCcEEEEeCCC------C--------------CC-ceEEEeCCH------HHHHHHHHHHHHHHh
Confidence 5788777 58888875433 1 11 137788743 347899999988775
No 24
>d2ctfa1 d.51.1.1 (A:7-96) Vigilin {Human (Homo sapiens) [TaxId: 9606]}
Probab=79.17 E-value=1.4 Score=27.51 Aligned_cols=42 Identities=14% Similarity=0.155 Sum_probs=29.4
Q ss_pred chhhhhh-cCcEEEEecCCCCCCccccccccCCCCCCCCCCCCceEEEEecCcHHHHHHHHHHHHHHHHhhcC
Q 039634 2 TPEVDLL-IKFKVSINGCPYTYTSLSIKVEIKDKPGYEHLNEPLHMLVEAEFPEVIINSCLDHAVAILENLLK 73 (127)
Q Consensus 2 ~K~LE~e-TgcKI~IRGkG~~~~~~S~Kd~~~~~~~~eh~~epLHVlI~a~~~~~~~~~~l~~A~~~Ie~lL~ 73 (127)
+++|+++ +||+|.+-- . + =-|.|+|+. +.+++|.+.|+.++.
T Consensus 43 I~~i~~~~~~v~I~~~~-~----------------------~-~~v~i~G~~------~~ve~Ak~~I~~iv~ 85 (90)
T d2ctfa1 43 LAKITQQMPKVHIEFTE-G----------------------E-DKITLEGPT------EDVSVAQEQIEGMVK 85 (90)
T ss_dssp HHHHHHHCSSSEEEECS-S----------------------S-CEEEEEECH------HHHHHHHHHHHHHHH
T ss_pred HHHHHHHcCCcEEeeCC-C----------------------C-ceEEEeCCH------HHHHHHHHHHHHHHH
Confidence 5788888 479987721 1 0 138888854 348899999988875
No 25
>d1e3ha4 d.52.3.1 (A:579-632) Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 6 {Streptomyces antibioticus [TaxId: 1890]}
Probab=77.35 E-value=0.22 Score=29.37 Aligned_cols=18 Identities=6% Similarity=-0.009 Sum_probs=9.8
Q ss_pred chhhhhhcCcEEEEecCC
Q 039634 2 TPEVDLLIKFKVSINGCP 19 (127)
Q Consensus 2 ~K~LE~eTgcKI~IRGkG 19 (127)
.|.|+++|||+|.|---|
T Consensus 25 Ik~I~~~tga~I~i~ddg 42 (54)
T d1e3ha4 25 INQIQEDTGAEITIEDDG 42 (54)
T ss_dssp --CHHHHSCCCC------
T ss_pred HHHHHHHHCCEEEEeCCe
Confidence 689999999999997666
No 26
>d1wjwa_ d.129.2.1 (A:) Phosphoacetylglucosamine mutase {Mouse (Mus musculus) [TaxId: 10090]}
Probab=67.08 E-value=9.1 Score=24.93 Aligned_cols=45 Identities=9% Similarity=0.038 Sum_probs=30.9
Q ss_pred CcEEEEecCCCCCCccccccccCCCCCCCCCCCCceEEEEecCcHHHHHHHHHHHHHHHHhhcCCC
Q 039634 10 KFKVSINGCPYTYTSLSIKVEIKDKPGYEHLNEPLHMLVEAEFPEVIINSCLDHAVAILENLLKPV 75 (127)
Q Consensus 10 gcKI~IRGkG~~~~~~S~Kd~~~~~~~~eh~~epLHVlI~a~~~~~~~~~~l~~A~~~Ie~lL~p~ 75 (127)
++++.||--| ...-++|+|||.+.+. ++.-......+|++++.-+
T Consensus 56 ~grvlIRpSG--------------------TEp~iRi~vEa~~~~~-~~~i~~~i~~lv~~~~~g~ 100 (112)
T d1wjwa_ 56 LARAFVRPSG--------------------TEDIVRVYAEANSQES-ADRLAYEVSLLVFQLAGGI 100 (112)
T ss_dssp SEEEEEECSS--------------------SSSSEEEEEEESSHHH-HHHHHHHHHHHHHHHTCCC
T ss_pred ceEEEEEeCC--------------------CCceEEEEEecCCHHH-HHHHHHHHHHHHHHHhCCc
Confidence 5788888866 2234899999998544 4566666777777776643
No 27
>d1b9ma1 a.4.5.8 (A:-1-126) N-terminal domain of molybdate-dependent transcriptional regulator ModE {Escherichia coli [TaxId: 562]}
Probab=40.79 E-value=4 Score=26.09 Aligned_cols=18 Identities=11% Similarity=0.045 Sum_probs=16.5
Q ss_pred chhhhhhcCcEEEEecCC
Q 039634 2 TPEVDLLIKFKVSINGCP 19 (127)
Q Consensus 2 ~K~LE~eTgcKI~IRGkG 19 (127)
+++||++.|+++.+|-+|
T Consensus 53 i~~lE~~lg~~Lf~R~~~ 70 (127)
T d1b9ma1 53 INEMNQLSEHILVERATG 70 (127)
T ss_dssp HHHHHHHHTSCCEEECCC
T ss_pred HHHHHHHhCCeEEEeecC
Confidence 689999999999999876
No 28
>d1nlta1 b.4.1.1 (A:110-138,A:213-257) Mitochondrial protein import protein mas5 (Hsp40, Ydj1), C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=38.82 E-value=16 Score=21.35 Aligned_cols=12 Identities=8% Similarity=0.028 Sum_probs=9.4
Q ss_pred hcCcEEEEecCC
Q 039634 8 LIKFKVSINGCP 19 (127)
Q Consensus 8 eTgcKI~IRGkG 19 (127)
..|.+|.++|+|
T Consensus 42 ~~G~~ir~~g~G 53 (74)
T d1nlta1 42 KDGQRIVFKGEA 53 (74)
T ss_dssp CTTCEEEETTCS
T ss_pred cCCeEEEecCCc
Confidence 457788888888
No 29
>d1ixca1 a.4.5.37 (A:1-89) LysR-type regulatory protein CbnR {Ralstonia eutropha [TaxId: 106590]}
Probab=36.90 E-value=2.8 Score=25.83 Aligned_cols=18 Identities=0% Similarity=-0.106 Sum_probs=13.3
Q ss_pred chhhhhhcCcEEEEecCC
Q 039634 2 TPEVDLLIKFKVSINGCP 19 (127)
Q Consensus 2 ~K~LE~eTgcKI~IRGkG 19 (127)
+|+||++.||++.+|..+
T Consensus 36 i~~LE~~lg~~Lf~R~~~ 53 (89)
T d1ixca1 36 MQALEADLGVVLLERSHR 53 (89)
T ss_dssp HHHHHHHHTSCCBC----
T ss_pred HHHHHhcCCceeeEecCC
Confidence 689999999999999644
No 30
>d1c3ga2 b.4.1.1 (A:260-349) Heat shock protein 40 Sis1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=35.58 E-value=10 Score=22.99 Aligned_cols=15 Identities=13% Similarity=0.264 Sum_probs=11.7
Q ss_pred CCCceEEEEecCcHH
Q 039634 41 NEPLHMLVEAEFPEV 55 (127)
Q Consensus 41 ~epLHVlI~a~~~~~ 55 (127)
..+|+|.+...-|.+
T Consensus 66 rGdL~V~~~v~~P~~ 80 (90)
T d1c3ga2 66 RGNLIVKYKVDYPIS 80 (90)
T ss_dssp BCCEEEEECCBCCSS
T ss_pred cCCEEEEEEEEcCCC
Confidence 468999998887754
No 31
>d2esna1 a.4.5.37 (A:3-91) Probable LysR-type transcriptional regulator PA0477 {Pseudomonas aeruginosa [TaxId: 287]}
Probab=31.47 E-value=6.6 Score=23.91 Aligned_cols=18 Identities=0% Similarity=-0.160 Sum_probs=15.8
Q ss_pred chhhhhhcCcEEEEecCC
Q 039634 2 TPEVDLLIKFKVSINGCP 19 (127)
Q Consensus 2 ~K~LE~eTgcKI~IRGkG 19 (127)
+++||++.||++.+|..+
T Consensus 41 l~~lE~~~g~~Lf~R~~~ 58 (89)
T d2esna1 41 LGRLRQGLDDELFLRQGN 58 (89)
T ss_dssp HHHHHHHHTSCCEEEETT
T ss_pred HHHHHhcCCceeEEECCC
Confidence 689999999999999644
No 32
>d1y9ua_ c.94.1.1 (A:) Ferric-binding protein FbpA {Bordetella pertussis [TaxId: 520]}
Probab=30.73 E-value=8 Score=26.36 Aligned_cols=18 Identities=11% Similarity=-0.206 Sum_probs=14.4
Q ss_pred chhhhhhcCcEEEEecCC
Q 039634 2 TPEVDLLIKFKVSINGCP 19 (127)
Q Consensus 2 ~K~LE~eTgcKI~IRGkG 19 (127)
++.-|++|||||.+...+
T Consensus 18 i~~Fek~tGIkV~~~~~~ 35 (318)
T d1y9ua_ 18 LDAFAKDSGIKVNTVFVK 35 (318)
T ss_dssp HHHHHHHHCCEEEEEECS
T ss_pred HHHHHHhhCCEEEEEECC
Confidence 567899999999887544
No 33
>d2fgea2 d.185.1.1 (A:798-993) Presequence protease 1, PREP1 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}
Probab=27.95 E-value=31 Score=22.70 Aligned_cols=60 Identities=12% Similarity=-0.032 Sum_probs=28.1
Q ss_pred EecCCCCCCccccccccCCCCCCCCCCCCceEEEEecCcHHHHHHHHHHHHHHHHhhcCCCCcchhHHHHHHH
Q 039634 15 INGCPYTYTSLSIKVEIKDKPGYEHLNEPLHMLVEAEFPEVIINSCLDHAVAILENLLKPVDESLDHYKKQQL 87 (127)
Q Consensus 15 IRGkG~~~~~~S~Kd~~~~~~~~eh~~epLHVlI~a~~~~~~~~~~l~~A~~~Ie~lL~p~~e~~delK~~QL 87 (127)
||++|.+|.-.+.-.. ......+.+..+.....+ ++...+.++.|.. .+-..+++.+...
T Consensus 50 iRekG~AYg~~~~~~~---------~~g~~~f~~y~~~~~~~t---~e~~~~~~~~l~~-~~~t~eeL~~ak~ 109 (196)
T d2fgea2 50 VRVSGGAYGGFCDFDS---------HSGVFSYLSYRDPNLLKT---LDIYDGTGDFLRG-LDVDQETLTKAII 109 (196)
T ss_dssp TTTTTCCSEEEEEEET---------TTTEEEEEEESBSCSHHH---HHHHHTHHHHHHT-CCCCHHHHHHHHH
T ss_pred hhccCCeEeEEEEecc---------CCCeeEEEEEcCCCHHHH---HHHHHHHHHHHHh-CCCCHHHHHHHHH
Confidence 6788877643333221 234455555554433333 3334444444443 2223566655443
No 34
>d2hpra_ d.94.1.1 (A:) Histidine-containing phosphocarrier protein (HPr) {Bacillus subtilis [TaxId: 1423]}
Probab=27.67 E-value=24 Score=21.53 Aligned_cols=46 Identities=9% Similarity=-0.129 Sum_probs=24.3
Q ss_pred hhhhcCcEEEEecCCCCCCccccccccCCCCCCCCCCCCceEEEEecCc
Q 039634 5 VDLLIKFKVSINGCPYTYTSLSIKVEIKDKPGYEHLNEPLHMLVEAEFP 53 (127)
Q Consensus 5 LE~eTgcKI~IRGkG~~~~~~S~Kd~~~~~~~~eh~~epLHVlI~a~~~ 53 (127)
+=+...|.|.|+-.|-..+-.|+-.=..-... ..+.+.|.++|+|.
T Consensus 24 ~a~~f~~~I~i~~~~~~~dakSi~~lm~L~~~---~G~~v~i~~~G~De 69 (87)
T d2hpra_ 24 TASKYDADVNLEYNGKTVNLKSIMGVVSLGIA---KGAEITISASGADE 69 (87)
T ss_dssp HHTTCSSEEEEEETTEEEETTCHHHHHTTCCC---TTCEEEEEEESTTH
T ss_pred HHHhCCCEEEEEECCEEEecHhHHHHHhcCCC---CCCEEEEEEECcCH
Confidence 34567899999865511111111000111222 35678898988884
No 35
>d2ds5a1 g.39.1.11 (A:11-48) ClpX chaperone zinc binding domain {Escherichia coli [TaxId: 562]}
Probab=27.56 E-value=11 Score=20.25 Aligned_cols=25 Identities=20% Similarity=0.387 Sum_probs=20.0
Q ss_pred ceEEEEecCcHHHHHHHHHHHHHHHH
Q 039634 44 LHMLVEAEFPEVIINSCLDHAVAILE 69 (127)
Q Consensus 44 LHVlI~a~~~~~~~~~~l~~A~~~Ie 69 (127)
.--||+|++ ..+++..|+.+.++|+
T Consensus 14 V~~LI~G~~-~~ICd~CV~~c~~il~ 38 (38)
T d2ds5a1 14 VRKLIAGPS-VYICDECVDLCNDIIR 38 (38)
T ss_dssp SSCEEECSS-CEEEHHHHHHHHHHHH
T ss_pred HHHHhcCCC-CEEcHHHHHHHHHHhC
Confidence 445788886 5799999999999875
No 36
>d1nlta2 b.4.1.1 (A:258-337) Mitochondrial protein import protein mas5 (Hsp40, Ydj1), C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=25.97 E-value=39 Score=19.59 Aligned_cols=13 Identities=15% Similarity=0.069 Sum_probs=9.1
Q ss_pred CCCceEEEEecCc
Q 039634 41 NEPLHMLVEAEFP 53 (127)
Q Consensus 41 ~epLHVlI~a~~~ 53 (127)
.-+|.|.+....|
T Consensus 67 ~GDL~v~~~V~~P 79 (80)
T d1nlta2 67 YGNLIIKFTIKDP 79 (80)
T ss_dssp BCCEEEEEEEECC
T ss_pred cCcEEEEEEEEcC
Confidence 3568888877654
No 37
>d1cm3a_ d.94.1.1 (A:) Histidine-containing phosphocarrier protein (HPr) {Escherichia coli [TaxId: 562]}
Probab=24.06 E-value=53 Score=19.69 Aligned_cols=46 Identities=7% Similarity=-0.126 Sum_probs=24.1
Q ss_pred hhhhcCcEEEEecCCCCCCccccccccCCCCCCCCCCCCceEEEEecCc
Q 039634 5 VDLLIKFKVSINGCPYTYTSLSIKVEIKDKPGYEHLNEPLHMLVEAEFP 53 (127)
Q Consensus 5 LE~eTgcKI~IRGkG~~~~~~S~Kd~~~~~~~~eh~~epLHVlI~a~~~ 53 (127)
+=+..+|.|.|+-.|-..+-.|+-.-..-... ..+.+.|.++|+|.
T Consensus 25 ~a~~f~s~i~i~~~~~~~~akSi~~lm~L~~~---~G~~i~i~~~G~De 70 (85)
T d1cm3a_ 25 EAKGFTSEITVTSNGKSASAKSLFKLQTLGLT---QGTVVTISAEGEDE 70 (85)
T ss_dssp HHHTSCSEEEEEETTEEEETTCHHHHTTSCCC---TTCEEEEEEESTTH
T ss_pred HHHhCCCEEEEEECCEEEecHhHHHHHhcCCC---CCCEEEEEEECCCH
Confidence 34568899999865511110111000111222 34668888888885
No 38
>d1pcha_ d.94.1.1 (A:) Histidine-containing phosphocarrier protein (HPr) {Mycoplasma capricolum [TaxId: 2095]}
Probab=24.04 E-value=14 Score=22.80 Aligned_cols=47 Identities=6% Similarity=-0.099 Sum_probs=24.9
Q ss_pred hhhhhcCcEEEEecCCCCCCccccccccCCCCCCCCCCCCceEEEEecCc
Q 039634 4 EVDLLIKFKVSINGCPYTYTSLSIKVEIKDKPGYEHLNEPLHMLVEAEFP 53 (127)
Q Consensus 4 ~LE~eTgcKI~IRGkG~~~~~~S~Kd~~~~~~~~eh~~epLHVlI~a~~~ 53 (127)
++=+...|+|.|.-.|-+.+-.|+-.-..-... ..+.+.|.++|+|.
T Consensus 23 ~~a~~f~~~I~i~~~~~~~~akSi~~lm~L~~~---~G~~v~i~~~G~De 69 (88)
T d1pcha_ 23 KEASKFSSNITIIANEKQGNLKSIMNVMAMAIK---TGTEITIQADGNDA 69 (88)
T ss_dssp HHHTTCSSEEEEEETTEEEETTCHHHHHHHCCC---TTCEEEEEEESTTH
T ss_pred HHHHhCCCEEEEEECCEEEchHhHHHHHhcCCC---CCCEEEEEEECCCH
Confidence 344678999999866621111111000110111 34668999998885
No 39
>d1atga_ c.94.1.1 (A:) Molybdate-binding protein, ModA {Azotobacter vinelandii [TaxId: 354]}
Probab=22.49 E-value=9.8 Score=24.52 Aligned_cols=19 Identities=11% Similarity=-0.018 Sum_probs=15.7
Q ss_pred chhhhhhcCcEEEEecCCC
Q 039634 2 TPEVDLLIKFKVSINGCPY 20 (127)
Q Consensus 2 ~K~LE~eTgcKI~IRGkG~ 20 (127)
.++.|++||++|.|+.-||
T Consensus 18 ~~~Fe~~tGi~V~~~~g~s 36 (231)
T d1atga_ 18 AGQFAKQTGHAVVISSGSS 36 (231)
T ss_dssp HHHHHHHHCCCEEEEEECH
T ss_pred HHHHHHhhCCEEEEEECCh
Confidence 4567999999999998773
No 40
>d2ja9a2 d.51.1.1 (A:152-236) Ribosomal RNA-processing protein 40, RRP40 {Saccharomyces cerevisiae [TaxId: 4932]}
Probab=21.38 E-value=83 Score=18.95 Aligned_cols=44 Identities=14% Similarity=0.008 Sum_probs=27.6
Q ss_pred CchhhhhhcCcEEEEecCCCCCCccccccccCCCCCCCCCCCCceEEEEecCcHHHHHHHHHHHHHHHHhh
Q 039634 1 MTPEVDLLIKFKVSINGCPYTYTSLSIKVEIKDKPGYEHLNEPLHMLVEAEFPEVIINSCLDHAVAILENL 71 (127)
Q Consensus 1 ~~K~LE~eTgcKI~IRGkG~~~~~~S~Kd~~~~~~~~eh~~epLHVlI~a~~~~~~~~~~l~~A~~~Ie~l 71 (127)
|++.|.+.++|.|.|==-| .|+|.|++.... -.+..|...+++=
T Consensus 23 ml~~l~~~~~~eI~VG~NG-------------------------rIWi~~~~~~~~--i~i~~aI~~~e~~ 66 (85)
T d2ja9a2 23 LLKVLAAHTKFEVAIGLNG-------------------------KIWVKCEELSNT--LACYRTIMECCQK 66 (85)
T ss_dssp HHHHHHTTCCCEEEEETTT-------------------------EEEEECSSHHHH--HHHHHHHHHHHHH
T ss_pred HHHHHHhhcCceEEEecCc-------------------------EEEEECCCHHHH--HHHHHHHHHHHHh
Confidence 4566777888888773322 488999886552 2345666556543
No 41
>d3etja1 b.84.2.1 (A:277-355) N5-carboxyaminoimidazole ribonucleotide synthetase PurK (AIRC), C-domain {Escherichia coli [TaxId: 562]}
Probab=20.69 E-value=44 Score=20.21 Aligned_cols=25 Identities=24% Similarity=0.287 Sum_probs=18.9
Q ss_pred eEEEEecCcHHHHHHHHHHHHHHHHhhcCC
Q 039634 45 HMLVEAEFPEVIINSCLDHAVAILENLLKP 74 (127)
Q Consensus 45 HVlI~a~~~~~~~~~~l~~A~~~Ie~lL~p 74 (127)
||-|.+++.+. +...++.+.++|.+
T Consensus 41 Hitl~~~~~~~-----l~~~~~~l~~~L~~ 65 (79)
T d3etja1 41 HLNLTDSDTSR-----LTATLEALIPLLPP 65 (79)
T ss_dssp EEEEECSCHHH-----HHHHHHHHGGGSCG
T ss_pred EEEeecCCHHH-----HHHHHHHHHHhCCH
Confidence 89999998543 66667777888774
No 42
>d1ptfa_ d.94.1.1 (A:) Histidine-containing phosphocarrier protein (HPr) {Enterococcus faecalis [TaxId: 1351]}
Probab=20.58 E-value=22 Score=21.64 Aligned_cols=46 Identities=9% Similarity=-0.045 Sum_probs=24.1
Q ss_pred hhhhcCcEEEEecCCCCCCccccccccCCCCCCCCCCCCceEEEEecCc
Q 039634 5 VDLLIKFKVSINGCPYTYTSLSIKVEIKDKPGYEHLNEPLHMLVEAEFP 53 (127)
Q Consensus 5 LE~eTgcKI~IRGkG~~~~~~S~Kd~~~~~~~~eh~~epLHVlI~a~~~ 53 (127)
+=+..+|+|.|.-.|-+.+-.|+=.-..-... ..+.+.|.++|+|.
T Consensus 25 ~a~~~~s~i~i~~~~~~v~akSi~~lm~L~~~---~G~~i~i~~~G~de 70 (87)
T d1ptfa_ 25 TASKFNSDINLEYKGKSVNLKSIMGVMSLGVG---QGSDVTITVDGADE 70 (87)
T ss_dssp HHTTCSSEEEEEETTEEEETTCHHHHHHHCCC---TTCEEEEEEESTTH
T ss_pred HHHhCCCEEEEEECCEEEeCcCHHHHHhcCCC---CCCEEEEEEECCCH
Confidence 34567899999866611111111000010111 34668999988885
Done!