BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 039637
(159 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|359486048|ref|XP_002270184.2| PREDICTED: pentatricopeptide repeat-containing protein At1g10910,
chloroplastic [Vitis vinifera]
gi|298204537|emb|CBI23812.3| unnamed protein product [Vitis vinifera]
Length = 659
Score = 286 bits (733), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 131/159 (82%), Positives = 148/159 (93%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
MISAFCRSG +E KQLA DFEA YDKYD+V+LN+MLCAYCR G+MESVM +MRK+DELA
Sbjct: 387 MISAFCRSGLLKEAKQLARDFEATYDKYDLVMLNTMLCAYCRAGEMESVMQMMRKMDELA 446
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
ISPD+NTFHILIKYFCKEK+Y+LAYRTM DMH KGHQPEEELCSSLI HLGK+RAHS+A
Sbjct: 447 ISPDWNTFHILIKYFCKEKLYLLAYRTMEDMHNKGHQPEEELCSSLISHLGKIRAHSQAF 506
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLKDAYIVVK 159
SVYNMLRYSKR+MCKALHEKILHIL++G+LLKDAY+VVK
Sbjct: 507 SVYNMLRYSKRTMCKALHEKILHILVAGRLLKDAYVVVK 545
>gi|224073298|ref|XP_002304067.1| predicted protein [Populus trichocarpa]
gi|222841499|gb|EEE79046.1| predicted protein [Populus trichocarpa]
Length = 378
Score = 279 bits (713), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 128/159 (80%), Positives = 146/159 (91%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
MIS+FCR G FEE K+LA +FEAKYDKYDV + N++LCAYCR G+MESVM MRK+DELA
Sbjct: 172 MISSFCRGGLFEEAKELAEEFEAKYDKYDVAISNAILCAYCRAGEMESVMRTMRKMDELA 231
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
ISPDYNTFHILIKYFCKEK+YMLAY+TM DMHRKGHQP EELCSSL+FHLGK++AHSEA
Sbjct: 232 ISPDYNTFHILIKYFCKEKLYMLAYQTMEDMHRKGHQPAEELCSSLLFHLGKIKAHSEAF 291
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLKDAYIVVK 159
SVY+ML+YSKR+MCKA HEKILHILI+GKLLKDAY+VVK
Sbjct: 292 SVYSMLKYSKRTMCKAFHEKILHILIAGKLLKDAYVVVK 330
>gi|224058965|ref|XP_002299667.1| predicted protein [Populus trichocarpa]
gi|222846925|gb|EEE84472.1| predicted protein [Populus trichocarpa]
Length = 562
Score = 271 bits (693), Expect = 7e-71, Method: Compositional matrix adjust.
Identities = 125/159 (78%), Positives = 144/159 (90%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
MIS+FCR G FEE K+LA +FEAKYDKYDVV+LN++LCAYCRTG+ ESVM MRK+DELA
Sbjct: 290 MISSFCRGGLFEEAKELAEEFEAKYDKYDVVILNTILCAYCRTGEKESVMRTMRKMDELA 349
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
ISPDYNTFHILIKYFCKEK+YMLAY+TM DMHRKGHQP EELCSSLI HLGK++AH+EA
Sbjct: 350 ISPDYNTFHILIKYFCKEKLYMLAYQTMEDMHRKGHQPMEELCSSLILHLGKIKAHAEAF 409
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLKDAYIVVK 159
SVY+ML+ SKR+M KA HE ILHILI+G+LLKDAY+VVK
Sbjct: 410 SVYSMLKSSKRTMSKAFHEDILHILIAGRLLKDAYVVVK 448
>gi|255576798|ref|XP_002529286.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223531275|gb|EEF33118.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 672
Score = 270 bits (690), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 123/159 (77%), Positives = 141/159 (88%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
MISA+CR EE KQLA +FEAKYDKYDVV+LN+MLCAYCR GDMESVM MRK+DELA
Sbjct: 398 MISAYCRGRLLEEAKQLAKEFEAKYDKYDVVILNTMLCAYCRAGDMESVMQTMRKMDELA 457
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
ISP Y TFHILIKYFCK+K+Y+LAY+TM DMHRKGHQPEEELCS LIFHLGK +A++EA
Sbjct: 458 ISPSYCTFHILIKYFCKQKLYLLAYQTMEDMHRKGHQPEEELCSMLIFHLGKAKAYTEAF 517
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLKDAYIVVK 159
SVY ML+Y KR+MCKALHEKILH+L+ G+LLKDAY+VVK
Sbjct: 518 SVYTMLKYGKRTMCKALHEKILHVLLGGQLLKDAYVVVK 556
>gi|449446895|ref|XP_004141206.1| PREDICTED: pentatricopeptide repeat-containing protein At1g10910,
chloroplastic-like [Cucumis sativus]
Length = 668
Score = 269 bits (687), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 123/159 (77%), Positives = 143/159 (89%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
MISAFCR G EE K LA DFEA YD+YD+V+LN+MLCAYCR G+MESVM ++RK+D+LA
Sbjct: 389 MISAFCRGGLLEEAKLLAKDFEATYDRYDIVILNTMLCAYCRAGEMESVMQMLRKMDDLA 448
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
ISPDYNTFHILIKYF KEK+Y+L YRT+ DMHRKGHQPEEELCSSLI LG +RA+SEA
Sbjct: 449 ISPDYNTFHILIKYFFKEKLYLLCYRTLEDMHRKGHQPEEELCSSLILSLGNIRAYSEAF 508
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLKDAYIVVK 159
SVYN+L+YSKR+MCKALHEKILHILI+G+LLKDAY+VVK
Sbjct: 509 SVYNILKYSKRTMCKALHEKILHILIAGRLLKDAYVVVK 547
>gi|356525958|ref|XP_003531588.1| PREDICTED: pentatricopeptide repeat-containing protein At1g10910,
chloroplastic-like [Glycine max]
Length = 630
Score = 259 bits (662), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 118/159 (74%), Positives = 140/159 (88%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
MISAFCR+ F E KQLA DFE +KYD+V+LNSMLCA+CR G+ME VM ++K+DELA
Sbjct: 357 MISAFCRAKLFREAKQLAKDFETTSNKYDLVILNSMLCAFCRVGEMERVMETLKKMDELA 416
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
I+P YNTFHILIKYFC+EKMY+LAYRTM DMH KGHQP EELCSSLI HLG++ A+SEA
Sbjct: 417 INPGYNTFHILIKYFCREKMYLLAYRTMKDMHSKGHQPVEELCSSLISHLGQVNAYSEAF 476
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLKDAYIVVK 159
SVYNML+YSKR+MCK+LHEKILHIL++G+LLKDAY+VVK
Sbjct: 477 SVYNMLKYSKRTMCKSLHEKILHILLAGQLLKDAYVVVK 515
>gi|357445509|ref|XP_003593032.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355482080|gb|AES63283.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 627
Score = 255 bits (652), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 115/159 (72%), Positives = 140/159 (88%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+ISAFCR+ F+E KQLA DF+ +DKYDVV++NSMLCA+CR G+MESVM +RK+DELA
Sbjct: 355 IISAFCRAKLFQEAKQLAKDFQTTFDKYDVVIMNSMLCAFCRAGEMESVMETLRKMDELA 414
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
ISPDYNTF+ILIKYFC++ MY+LAYRT +DMH KG+QP EELCSSLI+HLG+ A SEA
Sbjct: 415 ISPDYNTFNILIKYFCRKNMYLLAYRTTMDMHSKGYQPAEELCSSLIYHLGQENASSEAF 474
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLKDAYIVVK 159
S+YNMLRYSKR++ KALHEKILHIL++GKLLKDAY+V K
Sbjct: 475 SLYNMLRYSKRTIGKALHEKILHILLAGKLLKDAYVVFK 513
>gi|145335386|ref|NP_172560.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|122242678|sp|Q0WVV0.1|PPR31_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g10910, chloroplastic; Flags: Precursor
gi|110741600|dbj|BAE98748.1| membrane-associated salt-inducible protein isolog [Arabidopsis
thaliana]
gi|332190541|gb|AEE28662.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 664
Score = 246 bits (627), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 115/159 (72%), Positives = 138/159 (86%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
MISA CRS F+E K+L+ D E Y+K D+V+LN+MLCAYCR G+MESVM +M+K+DE A
Sbjct: 383 MISALCRSKRFKEAKELSRDSETTYEKCDLVMLNTMLCAYCRAGEMESVMRMMKKMDEQA 442
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+SPDYNTFHILIKYF KEK+++LAY+T +DMH KGH+ EEELCSSLI+HLGK+RA +EA
Sbjct: 443 VSPDYNTFHILIKYFIKEKLHLLAYQTTLDMHSKGHRLEEELCSSLIYHLGKIRAQAEAF 502
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLKDAYIVVK 159
SVYNMLRYSKR++CK LHEKILHILI G LLKDAYIVVK
Sbjct: 503 SVYNMLRYSKRTICKELHEKILHILIQGNLLKDAYIVVK 541
>gi|297843920|ref|XP_002889841.1| hypothetical protein ARALYDRAFT_888388 [Arabidopsis lyrata subsp.
lyrata]
gi|297335683|gb|EFH66100.1| hypothetical protein ARALYDRAFT_888388 [Arabidopsis lyrata subsp.
lyrata]
Length = 665
Score = 243 bits (621), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 117/159 (73%), Positives = 137/159 (86%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
MISA CRS FEE K+L+ D E Y+K D+V+LN+MLCAYCR G+MESVM +M+K+DE A
Sbjct: 384 MISALCRSKRFEEAKELSRDSETTYEKCDLVMLNTMLCAYCRAGEMESVMRMMKKMDEQA 443
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
I PDYNTFHILIKYF KEK+++LAY+T +DMH KGH+ EEELCSSLI+HLGK+RA SEA
Sbjct: 444 IIPDYNTFHILIKYFIKEKLHLLAYQTTLDMHSKGHRLEEELCSSLIYHLGKIRAPSEAF 503
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLKDAYIVVK 159
SVYNMLRYSKR++CK LHEKILHILI G LLKDAYIVVK
Sbjct: 504 SVYNMLRYSKRTICKELHEKILHILIHGDLLKDAYIVVK 542
>gi|1931651|gb|AAB65486.1| membrane-associated salt-inducible protein isolog; 88078-84012
[Arabidopsis thaliana]
Length = 652
Score = 214 bits (544), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 104/159 (65%), Positives = 126/159 (79%), Gaps = 12/159 (7%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
MISA CRS F+E K+L+ D E Y+K D+V+LN+MLCAYCR G+MESVM +M+K+DE A
Sbjct: 383 MISALCRSKRFKEAKELSRDSETTYEKCDLVMLNTMLCAYCRAGEMESVMRMMKKMDEQA 442
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+SPDYNTFHILIKYF KEK+++LAY+T +DMH KGH+ EE +RA +EA
Sbjct: 443 VSPDYNTFHILIKYFIKEKLHLLAYQTTLDMHSKGHRLEE------------IRAQAEAF 490
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLKDAYIVVK 159
SVYNMLRYSKR++CK LHEKILHILI G LLKDAYIVVK
Sbjct: 491 SVYNMLRYSKRTICKELHEKILHILIQGNLLKDAYIVVK 529
>gi|357135236|ref|XP_003569217.1| PREDICTED: pentatricopeptide repeat-containing protein At1g10910,
chloroplastic-like [Brachypodium distachyon]
Length = 644
Score = 200 bits (508), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 96/159 (60%), Positives = 122/159 (76%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
MISA R+G EE KQLA +FE + YD+V+LN+ L AYC T D ESVM +++K+DEL
Sbjct: 365 MISALHRAGYREEAKQLAKEFEDQNTTYDLVILNTSLRAYCNTNDTESVMRMLKKMDELN 424
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
ISPD+ TF+ LI+YFCK K+Y L Y+T+ DMH KGHQ EELCS ++ LG+ SEAL
Sbjct: 425 ISPDHITFNTLIRYFCKGKVYHLVYKTIEDMHTKGHQLNEELCSEVMLQLGEAGFPSEAL 484
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLKDAYIVVK 159
SVYNM+RYSKR++CK+LHEK+L IL+ LLKDAYIV+K
Sbjct: 485 SVYNMMRYSKRTVCKSLHEKVLSILVPAGLLKDAYIVIK 523
>gi|57899342|dbj|BAD87953.1| putative PPR protein [Oryza sativa Japonica Group]
Length = 650
Score = 196 bits (499), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 98/159 (61%), Positives = 120/159 (75%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
MISA R G EE+KQLA +FEAK YD+V+LN+ L AYC T DMESVM ++RK+DE
Sbjct: 374 MISALHRGGYREESKQLAKEFEAKNATYDLVMLNTSLRAYCSTNDMESVMIMLRKMDESN 433
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
ISPD TF+ LI+YFC K+Y LAY+T+ DMH KGHQ EELCS ++ LG+ SEA
Sbjct: 434 ISPDAITFNTLIRYFCMAKVYHLAYKTIQDMHTKGHQLNEELCSEIMMQLGEAGFPSEAF 493
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLKDAYIVVK 159
SVYNMLRY KR++CK+LHEK+L IL+ LLKDAY+VVK
Sbjct: 494 SVYNMLRYGKRTVCKSLHEKVLCILVPAGLLKDAYVVVK 532
Score = 35.4 bits (80), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 29/123 (23%), Positives = 54/123 (43%), Gaps = 2/123 (1%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+++A+ + +E+ L D + + V+L ++L Y + G E ++ +L+
Sbjct: 269 LLNAYSENANYEKADLLMKDLRSSGLTPNKVILTTLLKVYSKGGLFEKARELLTELEASG 328
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLI--FHLGKMRAHSE 118
+ D + ILI KE+ A DM KG + + S +I H G R S+
Sbjct: 329 FAQDEMPYCILIDGLVKERKIWEAMILFNDMKEKGVKSDGYAFSIMISALHRGGYREESK 388
Query: 119 ALS 121
L+
Sbjct: 389 QLA 391
>gi|218188463|gb|EEC70890.1| hypothetical protein OsI_02428 [Oryza sativa Indica Group]
Length = 647
Score = 196 bits (499), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 98/159 (61%), Positives = 120/159 (75%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
MISA R G EE+KQLA +FEAK YD+V+LN+ L AYC T DMESVM ++RK+DE
Sbjct: 371 MISALHRGGYREESKQLAKEFEAKNATYDLVMLNTSLRAYCSTNDMESVMIMLRKMDESN 430
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
ISPD TF+ LI+YFC K+Y LAY+T+ DMH KGHQ EELCS ++ LG+ SEA
Sbjct: 431 ISPDAITFNTLIRYFCMAKVYHLAYKTIQDMHTKGHQLNEELCSEIMMQLGEAGFPSEAF 490
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLKDAYIVVK 159
SVYNMLRY KR++CK+LHEK+L IL+ LLKDAY+VVK
Sbjct: 491 SVYNMLRYGKRTVCKSLHEKVLCILVPAGLLKDAYVVVK 529
Score = 35.8 bits (81), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 29/123 (23%), Positives = 54/123 (43%), Gaps = 2/123 (1%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+++A+ + +E+ L D + + V+L ++L Y + G E ++ +L+
Sbjct: 266 LLNAYSENANYEKADLLMKDLRSSGLTPNKVILTTLLKVYSKGGLFEKARELLTELEASG 325
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLI--FHLGKMRAHSE 118
+ D + ILI KE+ A DM KG + + S +I H G R S+
Sbjct: 326 FAQDEMPYCILIDGLVKERKIWEAMILFNDMKEKGVKSDGYAFSIMISALHRGGYREESK 385
Query: 119 ALS 121
L+
Sbjct: 386 QLA 388
>gi|222618680|gb|EEE54812.1| hypothetical protein OsJ_02231 [Oryza sativa Japonica Group]
Length = 637
Score = 196 bits (499), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 98/159 (61%), Positives = 120/159 (75%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
MISA R G EE+KQLA +FEAK YD+V+LN+ L AYC T DMESVM ++RK+DE
Sbjct: 361 MISALHRGGYREESKQLAKEFEAKNATYDLVMLNTSLRAYCSTNDMESVMIMLRKMDESN 420
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
ISPD TF+ LI+YFC K+Y LAY+T+ DMH KGHQ EELCS ++ LG+ SEA
Sbjct: 421 ISPDAITFNTLIRYFCMAKVYHLAYKTIQDMHTKGHQLNEELCSEIMMQLGEAGFPSEAF 480
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLKDAYIVVK 159
SVYNMLRY KR++CK+LHEK+L IL+ LLKDAY+VVK
Sbjct: 481 SVYNMLRYGKRTVCKSLHEKVLCILVPAGLLKDAYVVVK 519
Score = 35.8 bits (81), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 29/123 (23%), Positives = 54/123 (43%), Gaps = 2/123 (1%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+++A+ + +E+ L D + + V+L ++L Y + G E ++ +L+
Sbjct: 256 LLNAYSENANYEKADLLMKDLRSSGLTPNKVILTTLLKVYSKGGLFEKARELLTELEASG 315
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLI--FHLGKMRAHSE 118
+ D + ILI KE+ A DM KG + + S +I H G R S+
Sbjct: 316 FAQDEMPYCILIDGLVKERKIWEAMILFNDMKEKGVKSDGYAFSIMISALHRGGYREESK 375
Query: 119 ALS 121
L+
Sbjct: 376 QLA 378
>gi|297597021|ref|NP_001043343.2| Os01g0559500 [Oryza sativa Japonica Group]
gi|255673364|dbj|BAF05257.2| Os01g0559500 [Oryza sativa Japonica Group]
Length = 690
Score = 196 bits (498), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 98/159 (61%), Positives = 120/159 (75%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
MISA R G EE+KQLA +FEAK YD+V+LN+ L AYC T DMESVM ++RK+DE
Sbjct: 374 MISALHRGGYREESKQLAKEFEAKNATYDLVMLNTSLRAYCSTNDMESVMIMLRKMDESN 433
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
ISPD TF+ LI+YFC K+Y LAY+T+ DMH KGHQ EELCS ++ LG+ SEA
Sbjct: 434 ISPDAITFNTLIRYFCMAKVYHLAYKTIQDMHTKGHQLNEELCSEIMMQLGEAGFPSEAF 493
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLKDAYIVVK 159
SVYNMLRY KR++CK+LHEK+L IL+ LLKDAY+VVK
Sbjct: 494 SVYNMLRYGKRTVCKSLHEKVLCILVPAGLLKDAYVVVK 532
Score = 35.8 bits (81), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 29/123 (23%), Positives = 54/123 (43%), Gaps = 2/123 (1%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+++A+ + +E+ L D + + V+L ++L Y + G E ++ +L+
Sbjct: 269 LLNAYSENANYEKADLLMKDLRSSGLTPNKVILTTLLKVYSKGGLFEKARELLTELEASG 328
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLI--FHLGKMRAHSE 118
+ D + ILI KE+ A DM KG + + S +I H G R S+
Sbjct: 329 FAQDEMPYCILIDGLVKERKIWEAMILFNDMKEKGVKSDGYAFSIMISALHRGGYREESK 388
Query: 119 ALS 121
L+
Sbjct: 389 QLA 391
>gi|242053311|ref|XP_002455801.1| hypothetical protein SORBIDRAFT_03g025430 [Sorghum bicolor]
gi|241927776|gb|EES00921.1| hypothetical protein SORBIDRAFT_03g025430 [Sorghum bicolor]
Length = 642
Score = 191 bits (484), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 95/159 (59%), Positives = 121/159 (76%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
MISA R G EE+KQLA +FE++ YD+V+LN+ L YC T DMESVM +++K+DEL
Sbjct: 366 MISALHRGGHHEESKQLAKEFESENASYDLVMLNTSLRTYCSTNDMESVMRMLKKMDELN 425
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
ISPD TF+ LI+YFC K+Y LAY+T+ DMH KGHQ EELCS ++ LGK SEA
Sbjct: 426 ISPDNITFNTLIRYFCNSKVYHLAYKTVEDMHTKGHQLNEELCSHVMVQLGKGGFPSEAF 485
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLKDAYIVVK 159
S+YNMLRYSKR++ K+LHEK L IL++ +LLK+AYIVVK
Sbjct: 486 SLYNMLRYSKRTVHKSLHEKALGILVAAELLKEAYIVVK 524
>gi|414881861|tpg|DAA58992.1| TPA: hypothetical protein ZEAMMB73_732512 [Zea mays]
Length = 642
Score = 184 bits (468), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 93/159 (58%), Positives = 118/159 (74%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
MISA R G +E+KQLA +FE++ YD+V+LN+ L YC T DMESVM +++K+DE
Sbjct: 366 MISALHRGGHHQESKQLAKEFESENASYDLVMLNTSLRTYCSTNDMESVMRMLKKMDESN 425
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
ISPD TF+ LI+YFC K+ LAY+T+ DMH KGHQ EELCS ++ LGK SEA
Sbjct: 426 ISPDNITFNTLIRYFCNAKVCHLAYKTVEDMHAKGHQLNEELCSHVMVQLGKAGFPSEAF 485
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLKDAYIVVK 159
SVYNMLRYSKR++ K+LHEK+L IL+ +LLK AYIVVK
Sbjct: 486 SVYNMLRYSKRTVHKSLHEKVLGILVPAELLKAAYIVVK 524
>gi|168005568|ref|XP_001755482.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162693189|gb|EDQ79542.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 765
Score = 74.7 bits (182), Expect = 1e-11, Method: Composition-based stats.
Identities = 44/124 (35%), Positives = 67/124 (54%), Gaps = 4/124 (3%)
Query: 1 MISAFCRSGCFEETKQLAGDFE-AKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDEL 59
+ISA+ + G + +L E + + D++L N++L YC G M+ V V++K+D
Sbjct: 495 LISAYAKLGEMDGVLKLVDQIEKGQNGECDILLFNTLLKVYCNAGYMDGVTAVLKKMDAE 554
Query: 60 AISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLI---FHLGKMRAH 116
D TF+ILI YF KE + LA +T+ DM +GH+P E ++L GKM
Sbjct: 555 GCGSDRGTFNILIGYFAKEDLGDLALKTLEDMETRGHRPNEATYNALFQGYVKNGKMEEM 614
Query: 117 SEAL 120
EAL
Sbjct: 615 FEAL 618
>gi|242092012|ref|XP_002436496.1| hypothetical protein SORBIDRAFT_10g003720 [Sorghum bicolor]
gi|241914719|gb|EER87863.1| hypothetical protein SORBIDRAFT_10g003720 [Sorghum bicolor]
Length = 698
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 37/107 (34%), Positives = 60/107 (56%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ +C G +E ++L + EAK K DVV +++L AYC+ GD S + +++ E
Sbjct: 373 LINGYCMVGRMDEARELVREMEAKGVKPDVVTYSTILSAYCKNGDTHSAFQLNQQMLENG 432
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLI 107
+ PD T+ LI+ C+EK A+ +M G QP+E +SLI
Sbjct: 433 VLPDAITYSSLIRVLCEEKRLGDAHVLFKNMISLGLQPDEVTYTSLI 479
Score = 56.2 bits (134), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 37/159 (23%), Positives = 71/159 (44%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+++AFCR+G + ++L K ++V NS++ C+ G ME V ++ +
Sbjct: 198 LVAAFCRAGEVDRAERLVDMMREGGLKPNLVTFNSVVNGICKAGRMEDARKVFDEMVKEG 257
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
++PD +++ L+ +CK A +M RKG P+ +SLI + K A+
Sbjct: 258 LAPDGVSYNTLVGGYCKVGCSHEALSVFAEMTRKGIMPDVVTFTSLIHVMCKAGNLERAV 317
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLKDAYIVVK 159
+ +R M + ++ L DA + V+
Sbjct: 318 GLVREMRERGLQMNEITFTALIDGFCKKGFLDDALLAVR 356
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/123 (22%), Positives = 58/123 (47%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ A C G +E + D + V N+++ A+CR G+++ ++ + E
Sbjct: 163 LVRALCGRGHRKEALSVLRDMRGAGCDPNAVTYNTLVAAFCRAGEVDRAERLVDMMREGG 222
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ P+ TF+ ++ CK A + +M ++G P+ ++L+ K+ EAL
Sbjct: 223 LKPNLVTFNSVVNGICKAGRMEDARKVFDEMVKEGLAPDGVSYNTLVGGYCKVGCSHEAL 282
Query: 121 SVY 123
SV+
Sbjct: 283 SVF 285
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 25/107 (23%), Positives = 48/107 (44%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I FC+ G ++ + + VV N+++ YC G M+ ++R+++
Sbjct: 338 LIDGFCKKGFLDDALLAVREMRQCRIQPSVVCYNALINGYCMVGRMDEARELVREMEAKG 397
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLI 107
+ PD T+ ++ +CK A++ M G P+ SSLI
Sbjct: 398 VKPDVVTYSTILSAYCKNGDTHSAFQLNQQMLENGVLPDAITYSSLI 444
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 45/91 (49%), Gaps = 3/91 (3%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ +C+ GC E + + K DVV S++ C+ G++E + ++R++ E
Sbjct: 268 LVGGYCKVGCSHEALSVFAEMTRKGIMPDVVTFTSLIHVMCKAGNLERAVGLVREMRERG 327
Query: 61 ISPDYNTFHILIKYFCKEKMY---MLAYRTM 88
+ + TF LI FCK+ +LA R M
Sbjct: 328 LQMNEITFTALIDGFCKKGFLDDALLAVREM 358
Score = 35.8 bits (81), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 27/159 (16%), Positives = 67/159 (42%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C++G E L + + + + + +++ +C+ G ++ + +R++ +
Sbjct: 303 LIHVMCKAGNLERAVGLVREMRERGLQMNEITFTALIDGFCKKGFLDDALLAVREMRQCR 362
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
I P ++ LI +C A + +M KG +P+ S+++ K A
Sbjct: 363 IQPSVVCYNALINGYCMVGRMDEARELVREMEAKGVKPDVVTYSTILSAYCKNGDTHSAF 422
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLKDAYIVVK 159
+ + + + ++ +L K L DA+++ K
Sbjct: 423 QLNQQMLENGVLPDAITYSSLIRVLCEEKRLGDAHVLFK 461
>gi|414880311|tpg|DAA57442.1| TPA: hypothetical protein ZEAMMB73_673693 [Zea mays]
Length = 770
Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 36/154 (23%), Positives = 79/154 (51%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
MI C++ EE QL D + K D+ N+ L AYC G +E ++H++ ++
Sbjct: 503 MIQFCCKASKMEEAIQLRDDMIKRGFKPDLFTFNTFLRAYCNLGKVEDILHLLDQMKSEG 562
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ PD T+ +I +CK K A + ++++ + G +P + ++LI G+ + S+A+
Sbjct: 563 LKPDIVTYGTIIDGYCKAKDVHKANKYLIELIKNGLRPNAVIYNALIGGYGRNGSISDAI 622
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLKDA 154
V + ++++ + +++ + L+++A
Sbjct: 623 GVLDTMKHNGIQPTPITYNSLMYWMCHAGLVEEA 656
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 32/124 (25%), Positives = 56/124 (45%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
MI A CR+G + + + E + VV N ++ A CR+G +E + ++ E
Sbjct: 222 MIKALCRAGEIDAAFVMLAELERSGIQPTVVTYNVLMDALCRSGRVEEAFQLKGRMVEGR 281
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ P TF ILI + + + + +M G P E + + LI + SEAL
Sbjct: 282 LRPSIVTFGILINGLARGQRFGEVDAVLQEMEGFGITPNEVIYNQLIGWHCREGHCSEAL 341
Query: 121 SVYN 124
+++
Sbjct: 342 RLFD 345
Score = 41.2 bits (95), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 43/95 (45%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ A CRSG EE QL G + +V ++ R V V+++++
Sbjct: 257 LMDALCRSGRVEEAFQLKGRMVEGRLRPSIVTFGILINGLARGQRFGEVDAVLQEMEGFG 316
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKG 95
I+P+ ++ LI + C+E A R +M KG
Sbjct: 317 ITPNEVIYNQLIGWHCREGHCSEALRLFDEMVSKG 351
Score = 39.3 bits (90), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 38/163 (23%), Positives = 75/163 (46%), Gaps = 7/163 (4%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDEL- 59
+I CR G E +L + +K K VV N + A C+ G+ME H + LDE+
Sbjct: 327 LIGWHCREGHCSEALRLFDEMVSKGIKQTVVTYNLIAKALCKEGEME---HAEQILDEML 383
Query: 60 --AISPDYNTFHILIKYFCKEKMYM-LAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAH 116
++ + F+ ++ + + + + R + +M + +P + + ++ I L K H
Sbjct: 384 LAGMTVHCSLFNSVVAWHLRGTGRLDVVLRLIREMVARFLKPNDAVMTACIQELCKRGKH 443
Query: 117 SEALSVYNMLRYSKRSMCKALHEKILHILISGKLLKDAYIVVK 159
EA ++ ++ + A ++H L G +K+A V+K
Sbjct: 444 EEAAEIWFLVLGKGLGVNIATSNALIHGLCQGNNMKEATKVLK 486
>gi|357118714|ref|XP_003561096.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At5g39710-like [Brachypodium distachyon]
Length = 718
Score = 65.1 bits (157), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 35/107 (32%), Positives = 60/107 (56%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ +C+ G +E ++L + EAK K DVV +++L YC+ GD +S + RK+ +
Sbjct: 371 LINGYCKLGRMDEARELIHEMEAKGMKPDVVTYSTILSGYCKIGDTDSAFELNRKMLKKG 430
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLI 107
+ PD T+ LI+ C+E+ A M + G QP+E ++LI
Sbjct: 431 VVPDAITYSSLIRGLCEERRLGDACELFEKMLQLGLQPDEFTYTTLI 477
Score = 55.5 bits (132), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 33/159 (20%), Positives = 71/159 (44%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+++AFCR+G + ++L G + +V N+++ C+ G ME + ++
Sbjct: 196 LVAAFCRAGEVDAAERLVGVMREGGVRPSLVTFNTVVNGLCKAGRMEDARKMFDEMAREG 255
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
++PD +++ L+ +CK A +M +KG P+ +SLI + + A+
Sbjct: 256 LTPDGVSYNTLVSGYCKAGCLHEALAVFAEMAQKGVVPDVVTFTSLIHAMCRAGNLERAV 315
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLKDAYIVVK 159
++ +R M + ++ L DA + +K
Sbjct: 316 ALVGQMRERGLRMNEFTFTALIDGFCRNGFLDDALLAMK 354
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/124 (25%), Positives = 59/124 (47%), Gaps = 1/124 (0%)
Query: 1 MISAFCRSGCFEETKQLAGD-FEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDEL 59
++ A C G EE + GD +VV N+++ A+CR G++++ ++ + E
Sbjct: 160 LVRALCARGQREEALGVVGDDMRGAGCAPNVVTYNTLVAAFCRAGEVDAAERLVGVMREG 219
Query: 60 AISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEA 119
+ P TF+ ++ CK A + +M R+G P+ ++L+ K EA
Sbjct: 220 GVRPSLVTFNTVVNGLCKAGRMEDARKMFDEMAREGLTPDGVSYNTLVSGYCKAGCLHEA 279
Query: 120 LSVY 123
L+V+
Sbjct: 280 LAVF 283
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/98 (27%), Positives = 47/98 (47%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++S +C++GC E + + K DVV S++ A CR G++E + ++ ++ E
Sbjct: 266 LVSGYCKAGCLHEALAVFAEMAQKGVVPDVVTFTSLIHAMCRAGNLERAVALVGQMRERG 325
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQP 98
+ + TF LI FC+ A M +M QP
Sbjct: 326 LRMNEFTFTALIDGFCRNGFLDDALLAMKEMRECRIQP 363
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/99 (24%), Positives = 47/99 (47%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I A CR+G E L G + + + +++ +CR G ++ + M+++ E
Sbjct: 301 LIHAMCRAGNLERAVALVGQMRERGLRMNEFTFTALIDGFCRNGFLDDALLAMKEMRECR 360
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPE 99
I P +++LI +CK A + +M KG +P+
Sbjct: 361 IQPSVVCYNVLINGYCKLGRMDEARELIHEMEAKGMKPD 399
Score = 44.7 bits (104), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 29/123 (23%), Positives = 56/123 (45%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I FCR+G ++ + + VV N ++ YC+ G M+ ++ +++
Sbjct: 336 LIDGFCRNGFLDDALLAMKEMRECRIQPSVVCYNVLINGYCKLGRMDEARELIHEMEAKG 395
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ PD T+ ++ +CK A+ M +KG P+ SSLI L + R +A
Sbjct: 396 MKPDVVTYSTILSGYCKIGDTDSAFELNRKMLKKGVVPDAITYSSLIRGLCEERRLGDAC 455
Query: 121 SVY 123
++
Sbjct: 456 ELF 458
>gi|224059754|ref|XP_002299984.1| predicted protein [Populus trichocarpa]
gi|222847242|gb|EEE84789.1| predicted protein [Populus trichocarpa]
Length = 610
Score = 65.1 bits (157), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 34/128 (26%), Positives = 63/128 (49%), Gaps = 1/128 (0%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
M++A C+ G F++ K + E D+V N+++ AYCR G +E +M + +
Sbjct: 124 MVNALCKDGKFDDVKSFLSEMEGNGIYADMVTYNTLIGAYCREGLLEEAFEIMNSMADKG 183
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ P T++ +I CK+ Y A +++M G P+ ++L+ + SEA
Sbjct: 184 LKPSLFTYNAIINGLCKKGRYARAKGILIEMLNIGLSPDTTTYNTLLVESCRRDNFSEAK 243
Query: 121 SVYN-MLR 127
++ MLR
Sbjct: 244 EIFGEMLR 251
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/107 (26%), Positives = 50/107 (46%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C+ G + L G + K D+V N+++ +C+ G+ME + +
Sbjct: 369 LIHGHCQDGNMTKALSLFGTMTQRNIKPDIVAYNTLIDGFCKVGEMEKASELWDGMISRK 428
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLI 107
I P++ T+ ILI +C A+R M KG +P C+++I
Sbjct: 429 IFPNHITYGILINAYCSVGHVSEAFRLWDVMIEKGIKPTLVTCNTVI 475
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/120 (25%), Positives = 55/120 (45%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I A+CR G EE ++ K K + N+++ C+ G ++ ++ +
Sbjct: 159 LIGAYCREGLLEEAFEIMNSMADKGLKPSLFTYNAIINGLCKKGRYARAKGILIEMLNIG 218
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+SPD T++ L+ C+ + A +M R+G P+ SSLI + R +AL
Sbjct: 219 LSPDTTTYNTLLVESCRRDNFSEAKEIFGEMLRQGVVPDLVSFSSLIAVFSRNRHLDQAL 278
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/107 (23%), Positives = 52/107 (48%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I +CRSG + + G AK D + N+++ + R +M+ + K+++
Sbjct: 474 VIKGYCRSGDSSKADEFLGRMIAKGVAPDHISYNTLINGFVREDNMDKAFLWINKMEKEG 533
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLI 107
+ PD T+++++ FC++ A + M KG P+ ++LI
Sbjct: 534 LLPDIITYNVVMNGFCRQGRMQEAELVLRKMIEKGINPDRSTYTALI 580
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 25/100 (25%), Positives = 48/100 (48%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ F R ++ E + D++ N ++ +CR G M+ V+RK+ E
Sbjct: 509 LINGFVREDNMDKAFLWINKMEKEGLLPDIITYNVVMNGFCRQGRMQEAELVLRKMIEKG 568
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEE 100
I+PD +T+ LI + A+R +M ++G P++
Sbjct: 569 INPDRSTYTALINGHVTQDNLNEAFRFHDEMLQRGFAPDD 608
Score = 45.4 bits (106), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 25/99 (25%), Positives = 49/99 (49%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+A+C G E +L K K +V N+++ YCR+GD + ++
Sbjct: 439 LINAYCSVGHVSEAFRLWDVMIEKGIKPTLVTCNTVIKGYCRSGDSSKADEFLGRMIAKG 498
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPE 99
++PD+ +++ LI F +E A+ + M ++G P+
Sbjct: 499 VAPDHISYNTLINGFVREDNMDKAFLWINKMEKEGLLPD 537
Score = 41.2 bits (95), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 25/94 (26%), Positives = 46/94 (48%)
Query: 29 DVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYMLAYRTM 88
+V LN M+ A C+ G + V + +++ I D T++ LI +C+E + A+ M
Sbjct: 117 NVYTLNIMVNALCKDGKFDDVKSFLSEMEGNGIYADMVTYNTLIGAYCREGLLEEAFEIM 176
Query: 89 VDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSV 122
M KG +P +++I L K ++ A +
Sbjct: 177 NSMADKGLKPSLFTYNAIINGLCKKGRYARAKGI 210
Score = 36.2 bits (82), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 23/98 (23%), Positives = 47/98 (47%)
Query: 29 DVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYMLAYRTM 88
D V+ ++ YCR G+M + + ++ E D ++ ++ CKEKM A +
Sbjct: 292 DNVIYTVLMHGYCRNGNMLEALKIRDEMLEQGCVLDVIAYNTILNGLCKEKMLTDADKLF 351
Query: 89 VDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVYNML 126
+M +G P+ ++LI + ++ALS++ +
Sbjct: 352 DEMVERGALPDFYTFTTLIHGHCQDGNMTKALSLFGTM 389
Score = 35.4 bits (80), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 18/90 (20%), Positives = 42/90 (46%)
Query: 6 CRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDY 65
CR F E K++ G+ + D+V +S++ + R ++ + R + + + PD
Sbjct: 234 CRRDNFSEAKEIFGEMLRQGVVPDLVSFSSLIAVFSRNRHLDQALVYFRDMKKFGLVPDN 293
Query: 66 NTFHILIKYFCKEKMYMLAYRTMVDMHRKG 95
+ +L+ +C+ + A + +M +G
Sbjct: 294 VIYTVLMHGYCRNGNMLEALKIRDEMLEQG 323
>gi|449438627|ref|XP_004137089.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g02860-like [Cucumis sativus]
Length = 831
Score = 63.2 bits (152), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 36/141 (25%), Positives = 71/141 (50%)
Query: 5 FCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPD 64
+ R+ FE+++ + + AK K D++ N+++ AYCR G M+ + ++ + ++PD
Sbjct: 686 YSRTEHFEKSEDILREIIAKGMKPDIISFNTVIFAYCRNGRMKEASRIFAEMKDFGLAPD 745
Query: 65 YNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVYN 124
T++ I + + M++ A + M + G +P + +SLI K+ EA S +
Sbjct: 746 VITYNTFIASYASDSMFIEAIDVVKYMIKNGCKPNQNTYNSLIDWFCKLNRRDEASSFIS 805
Query: 125 MLRYSKRSMCKALHEKILHIL 145
LR S+ K ++L L
Sbjct: 806 NLRNLDPSVTKDEERRLLERL 826
Score = 40.0 bits (92), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 22/93 (23%), Positives = 49/93 (52%), Gaps = 7/93 (7%)
Query: 8 SGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNT 67
SG F+E K+ AG F + D + N+++ AY R G + M + R++ + ++PD +T
Sbjct: 486 SGVFKEMKR-AG-FVPERDTF-----NTLISAYSRCGFFDQAMAIYRRMLDAGVTPDLST 538
Query: 68 FHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEE 100
++ ++ + ++ + + + +M +P E
Sbjct: 539 YNAVLAALARGGLWEQSEKVLAEMKDGRCKPNE 571
Score = 38.1 bits (87), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 29/132 (21%), Positives = 58/132 (43%), Gaps = 1/132 (0%)
Query: 29 DVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYMLAYRTM 88
D+ S++ AY G + V +KL+E P T+++++ + K M +
Sbjct: 219 DIYAYTSLITAYASNGRYREAVMVFKKLEEEGCRPTLITYNVILNVYGKMGMPWSKIAGL 278
Query: 89 VD-MHRKGHQPEEELCSSLIFHLGKMRAHSEALSVYNMLRYSKRSMCKALHEKILHILIS 147
VD M G P+ ++LI + + EA V+ ++ + S K + +L +
Sbjct: 279 VDSMKSSGVAPDLYTYNTLISSCRRGSLYEEAAEVFEEMKAAGFSPDKVTYNALLDVYGK 338
Query: 148 GKLLKDAYIVVK 159
+ ++A V+K
Sbjct: 339 SRRPREAMEVLK 350
Score = 37.4 bits (85), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 24/98 (24%), Positives = 44/98 (44%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ + +S E ++ + EA +V NS++ AY R G ++ M + ++ +
Sbjct: 332 LLDVYGKSRRPREAMEVLKEMEASGFAPSIVTYNSLISAYARDGLLDEAMELKSQMVKKG 391
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQP 98
I PD T+ L+ F K A + +M G QP
Sbjct: 392 IKPDVFTYTTLLSGFEKTGKDDYAMKVFEEMRVAGCQP 429
>gi|4836917|gb|AAD30619.1|AC007153_11 similar to indole-3-acetate beta-glucosyltransferase [Arabidopsis
thaliana]
Length = 1184
Score = 62.8 bits (151), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 30/107 (28%), Positives = 56/107 (52%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+++ C+SG EE +L G+FEA D V +++ AYC++G+M+ +++++
Sbjct: 940 IVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKG 999
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLI 107
+ P TF++L+ FC M + + M KG P +SL+
Sbjct: 1000 LQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLV 1046
Score = 45.8 bits (107), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 30/127 (23%), Positives = 56/127 (44%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+++ FC G E+ ++L AK + NS++ YC ++++ + + +
Sbjct: 1010 LMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRG 1069
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ PD T+ L+K CK + A+ +M KG S LI K + EA
Sbjct: 1070 VGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAR 1129
Query: 121 SVYNMLR 127
V++ +R
Sbjct: 1130 EVFDQMR 1136
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 33/120 (27%), Positives = 53/120 (44%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+IS FC+ G E +L + K + D V ++ YC+ G M+ V + +
Sbjct: 835 IISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAG 894
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
SP+ T+ LI CKE A + +M + G QP +S++ L K EA+
Sbjct: 895 CSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAV 954
Score = 39.7 bits (91), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 29/123 (23%), Positives = 53/123 (43%), Gaps = 3/123 (2%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I FC+ G + + ++ DV+ +++ +C+ GDM + ++
Sbjct: 800 LIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKG 859
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHL---GKMRAHS 117
+ PD TF LI +CK A+R M + G P ++LI L G + + +
Sbjct: 860 LEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSAN 919
Query: 118 EAL 120
E L
Sbjct: 920 ELL 922
Score = 39.7 bits (91), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 20/98 (20%), Positives = 46/98 (46%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C+ G + +L + + ++ NS++ C++G++E + ++ + +
Sbjct: 905 LIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAG 964
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQP 98
++ D T+ L+ +CK A + +M KG QP
Sbjct: 965 LNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQP 1002
Score = 37.7 bits (86), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 23/96 (23%), Positives = 45/96 (46%)
Query: 29 DVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYMLAYRTM 88
D V+ +++ +C+ GD+ + ++ I+PD T+ +I FC+ + A +
Sbjct: 793 DTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLF 852
Query: 89 VDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVYN 124
+M KG +P+ + LI K +A V+N
Sbjct: 853 HEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHN 888
Score = 35.8 bits (81), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 27/116 (23%), Positives = 53/116 (45%), Gaps = 3/116 (2%)
Query: 6 CRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDY 65
C+ G +E L E K DV+ ++++ YCR G+++ V ++ + + P+
Sbjct: 700 CQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNS 759
Query: 66 NTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHL---GKMRAHSE 118
+ +I C+ A +M R+G P+ + ++LI G +RA S+
Sbjct: 760 YIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASK 815
>gi|334182313|ref|NP_172058.2| uncharacterized UDP-glucosyltransferase [Arabidopsis thaliana]
gi|334182315|ref|NP_001154307.2| uncharacterized UDP-glucosyltransferase [Arabidopsis thaliana]
gi|122236365|sp|Q0WVK7.1|PPR12_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g05670, mitochondrial; Flags: Precursor
gi|110741796|dbj|BAE98841.1| hypothetical protein [Arabidopsis thaliana]
gi|332189752|gb|AEE27873.1| uncharacterized UDP-glucosyltransferase [Arabidopsis thaliana]
gi|332189753|gb|AEE27874.1| uncharacterized UDP-glucosyltransferase [Arabidopsis thaliana]
Length = 741
Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 30/107 (28%), Positives = 56/107 (52%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+++ C+SG EE +L G+FEA D V +++ AYC++G+M+ +++++
Sbjct: 497 IVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKG 556
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLI 107
+ P TF++L+ FC M + + M KG P +SL+
Sbjct: 557 LQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLV 603
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/127 (23%), Positives = 56/127 (44%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+++ FC G E+ ++L AK + NS++ YC ++++ + + +
Sbjct: 567 LMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRG 626
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ PD T+ L+K CK + A+ +M KG S LI K + EA
Sbjct: 627 VGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAR 686
Query: 121 SVYNMLR 127
V++ +R
Sbjct: 687 EVFDQMR 693
Score = 45.8 bits (107), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 33/122 (27%), Positives = 54/122 (44%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+IS FC+ G E +L + K + D V ++ YC+ G M+ V + +
Sbjct: 392 IISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAG 451
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
SP+ T+ LI CKE A + +M + G QP +S++ L K EA+
Sbjct: 452 CSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAV 511
Query: 121 SV 122
+
Sbjct: 512 KL 513
Score = 40.0 bits (92), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 29/123 (23%), Positives = 53/123 (43%), Gaps = 3/123 (2%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I FC+ G + + ++ DV+ +++ +C+ GDM + ++
Sbjct: 357 LIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKG 416
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHL---GKMRAHS 117
+ PD TF LI +CK A+R M + G P ++LI L G + + +
Sbjct: 417 LEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSAN 476
Query: 118 EAL 120
E L
Sbjct: 477 ELL 479
Score = 39.7 bits (91), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 20/98 (20%), Positives = 46/98 (46%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C+ G + +L + + ++ NS++ C++G++E + ++ + +
Sbjct: 462 LIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAG 521
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQP 98
++ D T+ L+ +CK A + +M KG QP
Sbjct: 522 LNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQP 559
Score = 38.5 bits (88), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 23/96 (23%), Positives = 45/96 (46%)
Query: 29 DVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYMLAYRTM 88
D V+ +++ +C+ GD+ + ++ I+PD T+ +I FC+ + A +
Sbjct: 350 DTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLF 409
Query: 89 VDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVYN 124
+M KG +P+ + LI K +A V+N
Sbjct: 410 HEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHN 445
Score = 36.2 bits (82), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 27/116 (23%), Positives = 53/116 (45%), Gaps = 3/116 (2%)
Query: 6 CRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDY 65
C+ G +E L E K DV+ ++++ YCR G+++ V ++ + + P+
Sbjct: 257 CQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNS 316
Query: 66 NTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHL---GKMRAHSE 118
+ +I C+ A +M R+G P+ + ++LI G +RA S+
Sbjct: 317 YIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASK 372
>gi|413949109|gb|AFW81758.1| hypothetical protein ZEAMMB73_033635 [Zea mays]
Length = 691
Score = 62.4 bits (150), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 35/107 (32%), Positives = 60/107 (56%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ +C G +E ++L + EAK K DVV ++++ AYC+ D S + +++ E
Sbjct: 366 LINGYCMVGRMDEARELLHEMEAKGLKPDVVTYSTIISAYCKNCDTHSAFELNQQMLEKG 425
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLI 107
+ PD T+ LI+ C+EK A+ +M + G QP+E +SLI
Sbjct: 426 VLPDAITYSSLIRVLCEEKRLSDAHVLFKNMIKLGLQPDEFTYTSLI 472
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/159 (23%), Positives = 71/159 (44%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+++AF R+G + ++L G K ++V NSM+ C+ G ME V ++
Sbjct: 191 LVAAFFRAGEVDGAERLVGMMLDGGLKPNLVTFNSMVNGMCKAGKMEDARKVFDEMMREG 250
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
++PD +++ L+ +CK A +M +KG P+ +SLI + K A+
Sbjct: 251 LAPDGVSYNTLVGGYCKAGCSHEALSVFAEMTQKGIMPDVVTFTSLIHVMCKAGNLEWAV 310
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLKDAYIVVK 159
++ +R M + ++ L DA + V+
Sbjct: 311 TLVRQMRERGLQMNEVTFTALIDGFCKKGFLDDALLAVR 349
Score = 44.7 bits (104), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 29/123 (23%), Positives = 57/123 (46%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I A C G +E + D +VV N+++ A+ R G+++ ++ + +
Sbjct: 156 LIRALCGRGHRKEALSILRDMRGAGCGPNVVTYNTLVAAFFRAGEVDGAERLVGMMLDGG 215
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ P+ TF+ ++ CK A + +M R+G P+ ++L+ K EAL
Sbjct: 216 LKPNLVTFNSMVNGMCKAGKMEDARKVFDEMMREGLAPDGVSYNTLVGGYCKAGCSHEAL 275
Query: 121 SVY 123
SV+
Sbjct: 276 SVF 278
Score = 44.3 bits (103), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 32/128 (25%), Positives = 58/128 (45%), Gaps = 1/128 (0%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I FC+ G ++ K VV N+++ YC G M+ ++ +++
Sbjct: 331 LIDGFCKKGFLDDALLAVRGMRQCRIKPSVVCYNALINGYCMVGRMDEARELLHEMEAKG 390
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ PD T+ +I +CK A+ M KG P+ SSLI L + + S+A
Sbjct: 391 LKPDVVTYSTIISAYCKNCDTHSAFELNQQMLEKGVLPDAITYSSLIRVLCEEKRLSDAH 450
Query: 121 SVY-NMLR 127
++ NM++
Sbjct: 451 VLFKNMIK 458
>gi|413953163|gb|AFW85812.1| hypothetical protein ZEAMMB73_202457 [Zea mays]
Length = 731
Score = 62.0 bits (149), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 35/107 (32%), Positives = 59/107 (55%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ +C G +E ++L + EAK K DVV ++++ AYC+ D S + +++ E
Sbjct: 406 LINGYCMVGRMDEARELLHEMEAKGLKPDVVTYSTIISAYCKNCDTHSAFELNQQMLEKG 465
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLI 107
+ PD T+ LI+ C EK A+ +M + G QP+E +SLI
Sbjct: 466 VLPDAITYSSLIRVLCGEKRLSDAHVLFKNMIKLGLQPDEFTYTSLI 512
Score = 56.2 bits (134), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 37/159 (23%), Positives = 71/159 (44%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+++AF R+G + ++L G K ++V NSM+ C+ G ME V ++
Sbjct: 231 LVAAFFRAGEVDGAERLVGMMREGGLKPNLVTFNSMVNGMCKAGKMEDARKVFDEMVREG 290
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
++PD +++ L+ +CK A +M +KG P+ +SLI + K A+
Sbjct: 291 LAPDGVSYNTLVGGYCKAGCSHEALSVFAEMTQKGIMPDVVTFTSLIHVMCKAGNLERAV 350
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLKDAYIVVK 159
++ +R M + ++ L DA + V+
Sbjct: 351 TLVRQMRERGLQMNEVTFTALIDGFCKKGFLDDALLAVR 389
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 29/123 (23%), Positives = 57/123 (46%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ A C G +E + D +VV N+++ A+ R G+++ ++ + E
Sbjct: 196 LVRALCGRGHRKEALSILRDMRGAGCGPNVVTYNTLVAAFFRAGEVDGAERLVGMMREGG 255
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ P+ TF+ ++ CK A + +M R+G P+ ++L+ K EAL
Sbjct: 256 LKPNLVTFNSMVNGMCKAGKMEDARKVFDEMVREGLAPDGVSYNTLVGGYCKAGCSHEAL 315
Query: 121 SVY 123
SV+
Sbjct: 316 SVF 318
Score = 44.3 bits (103), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 27/107 (25%), Positives = 47/107 (43%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I FC+ G ++ + K VV N+++ YC G M+ ++ +++
Sbjct: 371 LIDGFCKKGFLDDALLAVRGMKQCRIKPSVVCYNALINGYCMVGRMDEARELLHEMEAKG 430
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLI 107
+ PD T+ +I +CK A+ M KG P+ SSLI
Sbjct: 431 LKPDVVTYSTIISAYCKNCDTHSAFELNQQMLEKGVLPDAITYSSLI 477
Score = 35.8 bits (81), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 29/165 (17%), Positives = 71/165 (43%), Gaps = 12/165 (7%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C++G E L + + + V +++ +C+ G ++ + +R + +
Sbjct: 336 LIHVMCKAGNLERAVTLVRQMRERGLQMNEVTFTALIDGFCKKGFLDDALLAVRGMKQCR 395
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
I P ++ LI +C A + +M KG +P+ S++I A+ +
Sbjct: 396 IKPSVVCYNALINGYCMVGRMDEARELLHEMEAKGLKPDVVTYSTII------SAYCKNC 449
Query: 121 SVYNMLRYSKRSMCKAL------HEKILHILISGKLLKDAYIVVK 159
++ +++ + K + + ++ +L K L DA+++ K
Sbjct: 450 DTHSAFELNQQMLEKGVLPDAITYSSLIRVLCGEKRLSDAHVLFK 494
>gi|224093190|ref|XP_002309826.1| predicted protein [Populus trichocarpa]
gi|222852729|gb|EEE90276.1| predicted protein [Populus trichocarpa]
Length = 1480
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/122 (30%), Positives = 60/122 (49%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
MIS + R G + +QL D E++ D V NS+L A+ R G++E V + ++ ++
Sbjct: 367 MISVYGRCGLSGKAEQLFNDLESRGFFPDAVSYNSLLYAFAREGNVEKVKEIWEEMVKIG 426
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
D T++ +I + K+ LA + DM G P+ + LI LGK +EA
Sbjct: 427 FGKDEMTYNTMIHMYGKQGQNELALQLYRDMQSSGRNPDAVTYTVLIDSLGKTNKIAEAA 486
Query: 121 SV 122
V
Sbjct: 487 GV 488
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/101 (24%), Positives = 50/101 (49%)
Query: 27 KYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYMLAYR 86
K D+ + NS+L Y D + V +++ E + PD +T++ LI +C++ +
Sbjct: 950 KPDLSIWNSVLKMYVAIEDFRKTIQVYQRIKEDGLEPDEDTYNTLIVMYCRDHRPEEGFS 1009
Query: 87 TMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVYNMLR 127
M +M G +P+ + SL+ GK + +A ++ L+
Sbjct: 1010 LMHEMRVAGLEPKLDTYKSLVASFGKQQLVEQAEELFEELQ 1050
Score = 43.5 bits (101), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 32/132 (24%), Positives = 59/132 (44%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+ISA R+ EE ++ D EA + + D+ N+M+ Y R G + L+
Sbjct: 332 LISACSRASNLEEAAKVFDDMEAHHCQPDLWTYNAMISVYGRCGLSGKAEQLFNDLESRG 391
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
PD +++ L+ F +E +M + G +E +++I GK + AL
Sbjct: 392 FFPDAVSYNSLLYAFAREGNVEKVKEIWEEMVKIGFGKDEMTYNTMIHMYGKQGQNELAL 451
Query: 121 SVYNMLRYSKRS 132
+Y ++ S R+
Sbjct: 452 QLYRDMQSSGRN 463
>gi|222634970|gb|EEE65102.1| hypothetical protein OsJ_20158 [Oryza sativa Japonica Group]
Length = 552
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/128 (29%), Positives = 72/128 (56%), Gaps = 1/128 (0%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ +C+ G + ++L + EAK K DVV ++++ YC+ G+++S + +K+ +
Sbjct: 227 LINGYCKLGRMDLARELIREMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKG 286
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ PD T+ LI+ C+EK A +M + G QP+E ++LI K +AL
Sbjct: 287 VLPDAITYSSLIRGLCEEKRLNDACELFENMLQLGVQPDEFTYTTLIDGHCKEGNVEKAL 346
Query: 121 SVYN-MLR 127
S+++ M+R
Sbjct: 347 SLHDEMIR 354
Score = 51.6 bits (122), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 35/160 (21%), Positives = 72/160 (45%), Gaps = 1/160 (0%)
Query: 1 MISAFCRSGCFEETKQLAGDF-EAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDEL 59
+++AFCR+G + +++ E K ++V NSM+ C+ G ME V ++
Sbjct: 51 LVAAFCRAGELDGAERVVSLMREEGNAKPNLVTFNSMVNGLCKAGRMEGARKVFDEMVRE 110
Query: 60 AISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEA 119
++PD +++ L+ +CK + +M ++G P+ +SLI K +A
Sbjct: 111 GLAPDVVSYNTLLSGYCKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQA 170
Query: 120 LSVYNMLRYSKRSMCKALHEKILHILISGKLLKDAYIVVK 159
+++ +R M + ++ L DA + V+
Sbjct: 171 VALVAQMRERGLRMNEVTFTALIDGFCKKGFLDDALLAVE 210
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 62/127 (48%), Gaps = 5/127 (3%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDM---ESVMHVMRKLD 57
++ A C G EE + GD + V N+++ A+CR G++ E V+ +MR +
Sbjct: 16 LVRALCARGRLEEAVGVVGDMRGAGCAPNAVTYNTLVAAFCRAGELDGAERVVSLMR--E 73
Query: 58 ELAISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHS 117
E P+ TF+ ++ CK A + +M R+G P+ ++L+ K+
Sbjct: 74 EGNAKPNLVTFNSMVNGLCKAGRMEGARKVFDEMVREGLAPDVVSYNTLLSGYCKVGCLH 133
Query: 118 EALSVYN 124
E+L+V++
Sbjct: 134 ESLAVFS 140
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/98 (26%), Positives = 50/98 (51%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++S +C+ GC E+ + + + DVV S++ A C+ G++E + ++ ++ E
Sbjct: 122 LLSGYCKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRERG 181
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQP 98
+ + TF LI FCK+ A + +M + G QP
Sbjct: 182 LRMNEVTFTALIDGFCKKGFLDDALLAVEEMRKCGIQP 219
Score = 48.9 bits (115), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 32/128 (25%), Positives = 63/128 (49%), Gaps = 1/128 (0%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I FC+ G ++ + + VV N+++ YC+ G M+ ++R+++
Sbjct: 192 LIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLARELIREMEAKR 251
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ PD T+ +I +CK A++ M +KG P+ SSLI L + + ++A
Sbjct: 252 VKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKRLNDAC 311
Query: 121 SVY-NMLR 127
++ NML+
Sbjct: 312 ELFENMLQ 319
>gi|218197600|gb|EEC80027.1| hypothetical protein OsI_21710 [Oryza sativa Indica Group]
Length = 694
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 61/107 (57%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ +C+ G + ++L + EAK K DVV ++++ YC+ G+++S + +K+ +
Sbjct: 369 LINGYCKLGRMDLARELIREMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKG 428
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLI 107
+ PD T+ LI+ C+EK A +M + G QP+E ++LI
Sbjct: 429 VLPDAITYSSLIRGLCEEKRLNDACELFENMLQLGVQPDEFTYTTLI 475
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/160 (21%), Positives = 72/160 (45%), Gaps = 1/160 (0%)
Query: 1 MISAFCRSGCFEETKQLAGDF-EAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDEL 59
+++AFCR+G + +++ E K ++V NSM+ C+ G ME V ++
Sbjct: 193 LVAAFCRAGELDGAERVVSLMREEGNAKPNLVTFNSMVNGLCKAGRMEGARKVFDEMVRE 252
Query: 60 AISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEA 119
++PD +++ L+ +CK + +M ++G P+ +SLI K +A
Sbjct: 253 GLAPDVVSYNTLLSGYCKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQA 312
Query: 120 LSVYNMLRYSKRSMCKALHEKILHILISGKLLKDAYIVVK 159
+++ +R M + ++ L DA + V+
Sbjct: 313 VALVAQMRERGLRMNEVTFTALIDGFCKKGFLDDALLAVE 352
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 62/127 (48%), Gaps = 5/127 (3%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDM---ESVMHVMRKLD 57
++ A C G EE + GD + V N+++ A+CR G++ E V+ +MR +
Sbjct: 158 LVRALCARGRLEEAVGVVGDMRGAGCAPNAVTYNTLVAAFCRAGELDGAERVVSLMR--E 215
Query: 58 ELAISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHS 117
E P+ TF+ ++ CK A + +M R+G P+ ++L+ K+
Sbjct: 216 EGNAKPNLVTFNSMVNGLCKAGRMEGARKVFDEMVREGLAPDVVSYNTLLSGYCKVGCLH 275
Query: 118 EALSVYN 124
E+L+V++
Sbjct: 276 ESLAVFS 282
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 31/116 (26%), Positives = 58/116 (50%), Gaps = 3/116 (2%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++S +C+ GC E+ + + + DVV S++ A C+ G++E + ++ ++ E
Sbjct: 264 LLSGYCKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRERG 323
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIF---HLGKM 113
+ + TF LI FCK+ A + +M + G QP ++LI LG+M
Sbjct: 324 LRMNEVTFTALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRM 379
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 32/128 (25%), Positives = 63/128 (49%), Gaps = 1/128 (0%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I FC+ G ++ + + VV N+++ YC+ G M+ ++R+++
Sbjct: 334 LIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLARELIREMEAKR 393
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ PD T+ +I +CK A++ M +KG P+ SSLI L + + ++A
Sbjct: 394 VKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKRLNDAC 453
Query: 121 SVY-NMLR 127
++ NML+
Sbjct: 454 ELFENMLQ 461
>gi|297605196|ref|NP_001056837.2| Os06g0152500 [Oryza sativa Japonica Group]
gi|255676726|dbj|BAF18751.2| Os06g0152500 [Oryza sativa Japonica Group]
Length = 717
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 61/107 (57%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ +C+ G + ++L + EAK K DVV ++++ YC+ G+++S + +K+ +
Sbjct: 369 LINGYCKLGRMDLARELIREMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKG 428
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLI 107
+ PD T+ LI+ C+EK A +M + G QP+E ++LI
Sbjct: 429 VLPDAITYSSLIRGLCEEKRLNDACELFENMLQLGVQPDEFTYTTLI 475
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/160 (21%), Positives = 72/160 (45%), Gaps = 1/160 (0%)
Query: 1 MISAFCRSGCFEETKQLAGDF-EAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDEL 59
+++AFCR+G + +++ E K ++V NSM+ C+ G ME V ++
Sbjct: 193 LVAAFCRAGELDGAERVVSLMREEGNAKPNLVTFNSMVNGLCKAGRMEGARKVFDEMVRE 252
Query: 60 AISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEA 119
++PD +++ L+ +CK + +M ++G P+ +SLI K +A
Sbjct: 253 GLAPDVVSYNTLLSGYCKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQA 312
Query: 120 LSVYNMLRYSKRSMCKALHEKILHILISGKLLKDAYIVVK 159
+++ +R M + ++ L DA + V+
Sbjct: 313 VALVAQMRERGLRMNEVTFTALIDGFCKKGFLDDALLAVE 352
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 62/127 (48%), Gaps = 5/127 (3%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDM---ESVMHVMRKLD 57
++ A C G EE + GD + V N+++ A+CR G++ E V+ +MR +
Sbjct: 158 LVRALCARGRLEEAVGVVGDMRGAGCAPNAVTYNTLVAAFCRAGELDGAERVVSLMR--E 215
Query: 58 ELAISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHS 117
E P+ TF+ ++ CK A + +M R+G P+ ++L+ K+
Sbjct: 216 EGNAKPNLVTFNSMVNGLCKAGRMEGARKVFDEMVREGLAPDVVSYNTLLSGYCKVGCLH 275
Query: 118 EALSVYN 124
E+L+V++
Sbjct: 276 ESLAVFS 282
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 31/116 (26%), Positives = 58/116 (50%), Gaps = 3/116 (2%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++S +C+ GC E+ + + + DVV S++ A C+ G++E + ++ ++ E
Sbjct: 264 LLSGYCKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRERG 323
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIF---HLGKM 113
+ + TF LI FCK+ A + +M + G QP ++LI LG+M
Sbjct: 324 LRMNEVTFTALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRM 379
Score = 48.5 bits (114), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 32/128 (25%), Positives = 63/128 (49%), Gaps = 1/128 (0%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I FC+ G ++ + + VV N+++ YC+ G M+ ++R+++
Sbjct: 334 LIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLARELIREMEAKR 393
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ PD T+ +I +CK A++ M +KG P+ SSLI L + + ++A
Sbjct: 394 VKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKRLNDAC 453
Query: 121 SVY-NMLR 127
++ NML+
Sbjct: 454 ELFENMLQ 461
>gi|356497981|ref|XP_003517834.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Glycine max]
Length = 543
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/126 (27%), Positives = 62/126 (49%)
Query: 29 DVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYMLAYRTM 88
++V NS++ +C T +M M+ + ++ + PD T+ LI FCK + A
Sbjct: 305 NIVTYNSLIHGWCETKNMNKAMYFLGEMVNNGLDPDVVTWSTLIGGFCKAGKPVAAKELF 364
Query: 89 VDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVYNMLRYSKRSMCKALHEKILHILISG 148
MH+ G P+ + C+ ++ L K HSEA+S++ L + ++ IL+ + S
Sbjct: 365 FVMHKHGQLPDLQTCAIILDGLFKCHFHSEAMSLFRELEKMNSDLDIIIYSIILNGMCSS 424
Query: 149 KLLKDA 154
L DA
Sbjct: 425 GKLNDA 430
Score = 39.7 bits (91), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 31/132 (23%), Positives = 55/132 (41%), Gaps = 3/132 (2%)
Query: 12 EETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHIL 71
E L + E D+++ + +L C +G + + + L + D T++I+
Sbjct: 393 SEAMSLFRELEKMNSDLDIIIYSIILNGMCSSGKLNDALELFSYLSSKGVKIDVVTYNIM 452
Query: 72 IKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSV-YNMLRYSK 130
I CKE + A ++ M G P+E C+ +F G +R + + S Y M K
Sbjct: 453 INGLCKEGLLDDAEDLLMKMEENGCPPDE--CTYNVFVQGLLRRYEISKSTKYLMFMKGK 510
Query: 131 RSMCKALHEKIL 142
A K+L
Sbjct: 511 GFRANATTTKLL 522
Score = 38.1 bits (87), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 18/73 (24%), Positives = 37/73 (50%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+++ C SG + +L +K K DVV N M+ C+ G ++ ++ K++E
Sbjct: 417 ILNGMCSSGKLNDALELFSYLSSKGVKIDVVTYNIMINGLCKEGLLDDAEDLLMKMEENG 476
Query: 61 ISPDYNTFHILIK 73
PD T+++ ++
Sbjct: 477 CPPDECTYNVFVQ 489
>gi|242058841|ref|XP_002458566.1| hypothetical protein SORBIDRAFT_03g035845 [Sorghum bicolor]
gi|241930541|gb|EES03686.1| hypothetical protein SORBIDRAFT_03g035845 [Sorghum bicolor]
Length = 796
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/157 (21%), Positives = 74/157 (47%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
MI C++ +E QL D + K D+ N L YC G +E ++H++ ++
Sbjct: 498 MIQGCCKASKMDEAIQLRDDMIKRGFKPDLFTFNIFLHTYCNLGKVEEILHLLDQMKSEG 557
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ PD T+ +I +CK K A + ++ + G +P + ++LI G+ S+A+
Sbjct: 558 LKPDIVTYGTIIDGYCKAKDMHKANEYLTELMKNGLRPNAVIYNALIGGYGRNGNISDAI 617
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLKDAYIV 157
+ + ++Y+ + +++ + L+++ V
Sbjct: 618 GILDTMKYNGIQPTPVTYNSLMYWMCHAGLVEEVKAV 654
Score = 43.9 bits (102), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 32/126 (25%), Positives = 58/126 (46%), Gaps = 4/126 (3%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
MI A CR+G + + + + VV N ++ A C++G +E + ++ E
Sbjct: 217 MIKALCRAGEIDAAFAMLAELRRSGIQPTVVTYNVLMDALCKSGRVEEAFRLKGRMVEGR 276
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLI-FHLGKMRAH-SE 118
+ P TF ILI + + + + +M G P E + + +I +H K H SE
Sbjct: 277 VRPSIVTFGILISGLARGQQFGEVGAVLQEMQGFGITPNEVIYNEMIGWHCRK--GHCSE 334
Query: 119 ALSVYN 124
AL +++
Sbjct: 335 ALKLFD 340
Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 41/163 (25%), Positives = 74/163 (45%), Gaps = 7/163 (4%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
MI CR G E +L + +K K VV N + A C+ G+ME H + LDE+
Sbjct: 322 MIGWHCRKGHCSEALKLFDEMVSKGIKQTVVTYNLIAKALCKEGEME---HAEKILDEML 378
Query: 61 ISPDY---NTFHILIKYFCKEKMYM-LAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAH 116
++ + F+ ++ + + + L R + +M + +P + L ++ I L K H
Sbjct: 379 LAGMMVHCSLFNSVVAWHLRGTGRLDLVLRLIREMLARFLKPNDALMTACIQELCKSGKH 438
Query: 117 SEALSVYNMLRYSKRSMCKALHEKILHILISGKLLKDAYIVVK 159
EA ++ + + A ++H L G +K+A V+K
Sbjct: 439 EEAAEIWFQVLGKGLGVNVATSNALIHGLCQGNNMKEATKVLK 481
>gi|449527621|ref|XP_004170808.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At1g13630-like [Cucumis
sativus]
Length = 830
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/126 (26%), Positives = 67/126 (53%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ FCR G E +++ K VV +++ AYC G+M+ + H + +++ A
Sbjct: 557 LINGFCRRGDLMEARKMLEVIRLKGLVPSVVTYTTLMNAYCEVGNMQEMFHFLHEMEANA 616
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ P + T+ +LIK C++ + + + M+ KG P+ +++I K + ++AL
Sbjct: 617 VVPTHVTYTVLIKGLCRQNKMHESLQLLEYMYAKGLLPDSVTYNTIIQCFCKGKEITKAL 676
Query: 121 SVYNML 126
+YNM+
Sbjct: 677 QLYNMM 682
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/124 (25%), Positives = 58/124 (46%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C+ G EE +L + ++ K +V+ N +L C+ G +E + + +++ L
Sbjct: 382 LICGHCQMGNIEEALKLRQETLSRGFKLNVIFYNMLLSCLCKVGRIEEALTLFDEMETLR 441
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ PD+ + ILI CKE AY+ M K P +++ L K SEA
Sbjct: 442 LEPDFIVYSILIHGLCKEGFVQRAYQLYEQMRLKRKFPHHFAQRAVLLGLFKNGNISEAR 501
Query: 121 SVYN 124
+ ++
Sbjct: 502 NYFD 505
Score = 42.4 bits (98), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 46/100 (46%), Gaps = 6/100 (6%)
Query: 29 DVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYMLAYRTM 88
DVVL N M+ Y R + M + K+ E I+P TF+ LI FC+ M A + +
Sbjct: 515 DVVLYNIMIDGYVRLDGIAEAMQLYYKMIERGITPSVVTFNTLINGFCRRGDLMEARKML 574
Query: 89 VDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVYNMLRY 128
+ KG P S++ + M A+ E ++ M +
Sbjct: 575 EVIRLKGLVP------SVVTYTTLMNAYCEVGNMQEMFHF 608
>gi|356528294|ref|XP_003532739.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Glycine max]
Length = 594
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/127 (24%), Positives = 64/127 (50%)
Query: 29 DVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYMLAYRTM 88
D+V+ S++ +C+ ++ VMH++ ++ ++ PD T+ LI FC+ + A
Sbjct: 356 DIVVFTSLIHGWCKDKNINKVMHLLEEMAKMGFVPDVVTWTTLIGGFCQAGRPLAAKELF 415
Query: 89 VDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVYNMLRYSKRSMCKALHEKILHILISG 148
++MH+ G P + C+ ++ L K SEA+S+ + S + ++ +L + S
Sbjct: 416 LNMHKYGQVPNLQTCAVILDGLCKGNLLSEAVSLAEAMEKSNLDLNIVIYSILLDGMCSA 475
Query: 149 KLLKDAY 155
L A+
Sbjct: 476 GKLNAAW 482
Score = 41.2 bits (95), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 27/126 (21%), Positives = 55/126 (43%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ C+ G E L + K + ++V ++ C G + ++ ++ ++
Sbjct: 223 IMDGLCKDGLVSEALNLCSEMSGKGVRPNLVTYACLIQGLCNFGRWKETGSLLDEMIKMG 282
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ D T +IL+ FCKE M A + M G P+ +SLI +EA+
Sbjct: 283 MRLDLQTLNILVDAFCKEGKVMQAKSVIGFMILTGEGPDVFTYNSLIHIYCLQNKMNEAM 342
Query: 121 SVYNML 126
V++++
Sbjct: 343 RVFHLM 348
Score = 40.8 bits (94), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 22/99 (22%), Positives = 41/99 (41%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ C G + L E DV ++ C+TGD + + +RK++E
Sbjct: 153 LINGLCVQGNVAQAVGLVDHMEKMRYPLDVYTYGVLINGLCKTGDTLAAVEWLRKMEERN 212
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPE 99
P+ + ++ CK+ + A +M KG +P
Sbjct: 213 WKPNVVVYSTIMDGLCKDGLVSEALNLCSEMSGKGVRPN 251
Score = 38.1 bits (87), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 25/122 (20%), Positives = 49/122 (40%), Gaps = 2/122 (1%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ C+ E LA E ++V+ + +L C G + + + L
Sbjct: 433 ILDGLCKGNLLSEAVSLAEAMEKSNLDLNIVIYSILLDGMCSAGKLNAAWELFSSLPGKG 492
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ + T+ I+IK CK+ A +++M G P+ C+ +F G + A
Sbjct: 493 LQINVYTYTIMIKGLCKQGSLDKAEDLLINMEENGCLPDN--CTYNVFVQGLLTKKEIAR 550
Query: 121 SV 122
S+
Sbjct: 551 SI 552
Score = 37.4 bits (85), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 27/107 (25%), Positives = 48/107 (44%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C G ++ET L + + D+ LN ++ A+C+ G + V+ +
Sbjct: 258 LIQGLCNFGRWKETGSLLDEMIKMGMRLDLQTLNILVDAFCKEGKVMQAKSVIGFMILTG 317
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLI 107
PD T++ LI +C + A R M +G P+ + +SLI
Sbjct: 318 EGPDVFTYNSLIHIYCLQNKMNEAMRVFHLMVSRGCLPDIVVFTSLI 364
>gi|449453449|ref|XP_004144470.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g13630-like [Cucumis sativus]
Length = 830
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/126 (26%), Positives = 67/126 (53%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ FCR G E +++ K VV +++ AYC G+M+ + H + +++ A
Sbjct: 557 LINGFCRRGDLMEARKMLEVIRLKGLVPSVVTYTTLMNAYCEVGNMQEMFHFLHEMEANA 616
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ P + T+ +LIK C++ + + + M+ KG P+ +++I K + ++AL
Sbjct: 617 VVPTHVTYTVLIKGLCRQNKMHESLQLLEYMYAKGLLPDSVTYNTIIQCFCKGKEITKAL 676
Query: 121 SVYNML 126
+YNM+
Sbjct: 677 QLYNMM 682
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/124 (25%), Positives = 58/124 (46%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C+ G EE +L + ++ K +V+ N +L C+ G +E + + +++ L
Sbjct: 382 LICGHCQMGNIEEALKLRQETLSRGFKLNVIFYNMLLSCLCKVGRIEEALTLFDEMETLR 441
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ PD+ + ILI CKE AY+ M K P +++ L K SEA
Sbjct: 442 LEPDFIVYSILIHGLCKEGFVQRAYQLYEQMRLKRKFPHHFAQRAVLLGLFKNGNISEAR 501
Query: 121 SVYN 124
+ ++
Sbjct: 502 NYFD 505
Score = 42.4 bits (98), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 46/100 (46%), Gaps = 6/100 (6%)
Query: 29 DVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYMLAYRTM 88
DVVL N M+ Y R + M + K+ E I+P TF+ LI FC+ M A + +
Sbjct: 515 DVVLYNIMIDGYVRLDGIAEAMQLYYKMIERGITPSVVTFNTLINGFCRRGDLMEARKML 574
Query: 89 VDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVYNMLRY 128
+ KG P S++ + M A+ E ++ M +
Sbjct: 575 EVIRLKGLVP------SVVTYTTLMNAYCEVGNMQEMFHF 608
>gi|225427506|ref|XP_002263778.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g31840-like [Vitis vinifera]
Length = 1131
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/183 (26%), Positives = 78/183 (42%), Gaps = 39/183 (21%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ R+G EE L A+ K DVV+ +S++ AY R GD+ + V ++ +
Sbjct: 316 LINGLFRAGKLEEGNSLFSMALARGVKMDVVIFSSIMDAYVRVGDLGKAIEVYTRMLKEG 375
Query: 61 ISPDYNTFHILIKYFCKEKMYM------------------LAYRTMVD------------ 90
ISP+ T+ ILI C+ + L Y +++D
Sbjct: 376 ISPNVVTYSILINGLCRNGRVLEACGVFGQILKQGLEPSVLTYSSLIDGFCKSENLRDGF 435
Query: 91 -----MHRKGHQPEEELCSSLIFHLGKMRAHSEALSVYNMLRYSKRSMCKALHEKILHIL 145
M RKGH P+ +CS LI L + EAL + + KR + L+ + + L
Sbjct: 436 GLYGIMLRKGHVPDVVVCSMLINGLSRQGMMDEALRFF--FQAVKRGL--TLNNYLFNAL 491
Query: 146 ISG 148
I G
Sbjct: 492 IDG 494
Score = 44.3 bits (103), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 33/123 (26%), Positives = 49/123 (39%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ F R GC E +L + + D+V N+M+C YC + + L
Sbjct: 596 LINMFFREGCVENVLELLREIIKYGLEPDIVTYNTMICGYCSLKIFSKAIKLFEVLKCGR 655
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
P+ TF ILI +CK+ A M +G +P S LI K A
Sbjct: 656 TQPNAITFTILIDAYCKDGRMDDAMLIFSSMLERGPEPNILTYSCLIDGYFKTENTESAF 715
Query: 121 SVY 123
+Y
Sbjct: 716 ELY 718
>gi|296088470|emb|CBI37461.3| unnamed protein product [Vitis vinifera]
Length = 822
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/183 (26%), Positives = 78/183 (42%), Gaps = 39/183 (21%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ R+G EE L A+ K DVV+ +S++ AY R GD+ + V ++ +
Sbjct: 316 LINGLFRAGKLEEGNSLFSMALARGVKMDVVIFSSIMDAYVRVGDLGKAIEVYTRMLKEG 375
Query: 61 ISPDYNTFHILIKYFCKEKMYM------------------LAYRTMVD------------ 90
ISP+ T+ ILI C+ + L Y +++D
Sbjct: 376 ISPNVVTYSILINGLCRNGRVLEACGVFGQILKQGLEPSVLTYSSLIDGFCKSENLRDGF 435
Query: 91 -----MHRKGHQPEEELCSSLIFHLGKMRAHSEALSVYNMLRYSKRSMCKALHEKILHIL 145
M RKGH P+ +CS LI L + EAL + + KR + L+ + + L
Sbjct: 436 GLYGIMLRKGHVPDVVVCSMLINGLSRQGMMDEALRFF--FQAVKRGL--TLNNYLFNAL 491
Query: 146 ISG 148
I G
Sbjct: 492 IDG 494
Score = 44.7 bits (104), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 33/123 (26%), Positives = 49/123 (39%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ F R GC E +L + + D+V N+M+C YC + + L
Sbjct: 596 LINMFFREGCVENVLELLREIIKYGLEPDIVTYNTMICGYCSLKIFSKAIKLFEVLKCGR 655
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
P+ TF ILI +CK+ A M +G +P S LI K A
Sbjct: 656 TQPNAITFTILIDAYCKDGRMDDAMLIFSSMLERGPEPNILTYSCLIDGYFKTENTESAF 715
Query: 121 SVY 123
+Y
Sbjct: 716 ELY 718
>gi|242076206|ref|XP_002448039.1| hypothetical protein SORBIDRAFT_06g020090 [Sorghum bicolor]
gi|241939222|gb|EES12367.1| hypothetical protein SORBIDRAFT_06g020090 [Sorghum bicolor]
Length = 481
Score = 60.5 bits (145), Expect = 3e-07, Method: Composition-based stats.
Identities = 34/105 (32%), Positives = 58/105 (55%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I AF R G +ET +L K + DVV+ N+++ ++C GDME +M ++++
Sbjct: 330 LIYAFSRKGQVQETDRLFKVAVKKGIRPDVVMYNALINSHCAGGDMERAFEIMAEMEKKR 389
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSS 105
I PD T++ LI+ FC A + +M ++G QP+ LC +
Sbjct: 390 IPPDDVTYNTLIRGFCLLGRLDEARGLIDEMTKRGIQPDLGLCKN 434
Score = 41.2 bits (95), Expect = 0.16, Method: Composition-based stats.
Identities = 28/112 (25%), Positives = 46/112 (41%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I +C G + Q D + V N ++ A G V+ ++
Sbjct: 225 LIGGYCDRGKLDVALQYREDMVQRGVAMTVATYNLLVHALFMDGRASDAYAVLEEMQRNG 284
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGK 112
+SPD T++ILI +CKE A +M RKG + +SLI+ +
Sbjct: 285 LSPDVFTYNILINGYCKEGNEKKALEVFEEMSRKGVRATAVTYTSLIYAFSR 336
Score = 37.7 bits (86), Expect = 1.8, Method: Composition-based stats.
Identities = 32/133 (24%), Positives = 59/133 (44%), Gaps = 2/133 (1%)
Query: 29 DVVLLNSMLCAYCRTGDMESVMHVMRKLDEL-AISPDYNTFHILIKYFCKEKMYMLAYRT 87
+ V N+++ +C G +++ + VMR++ E I+PD T+ LI +CK A +
Sbjct: 146 NAVTYNTVIAGFCARGRVQAALEVMREMRERGGIAPDKYTYATLISGWCKIGRMEDAAKV 205
Query: 88 MVDMHRKGH-QPEEELCSSLIFHLGKMRAHSEALSVYNMLRYSKRSMCKALHEKILHILI 146
+M +G P + ++LI AL + +M A + ++H L
Sbjct: 206 FDEMLTQGEVAPSAVMYNALIGGYCDRGKLDVALQYREDMVQRGVAMTVATYNLLVHALF 265
Query: 147 SGKLLKDAYIVVK 159
DAY V++
Sbjct: 266 MDGRASDAYAVLE 278
Score = 36.6 bits (83), Expect = 3.4, Method: Composition-based stats.
Identities = 22/107 (20%), Positives = 49/107 (45%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ +C+ G ++ ++ + K + V S++ A+ R G ++ + + +
Sbjct: 295 LINGYCKEGNEKKALEVFEEMSRKGVRATAVTYTSLIYAFSRKGQVQETDRLFKVAVKKG 354
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLI 107
I PD ++ LI C A+ M +M +K P++ ++LI
Sbjct: 355 IRPDVVMYNALINSHCAGGDMERAFEIMAEMEKKRIPPDDVTYNTLI 401
>gi|312190399|gb|ADQ43199.1| unknown [Eutrema parvulum]
Length = 1128
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/124 (26%), Positives = 63/124 (50%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
MI + + G ++T + ++ + DV+ NS++ +C++G + + R++ +
Sbjct: 174 MIDGYGKVGRLDDTVYFFEEMKSMSCEPDVITYNSLINCFCKSGKLPKGLEFYREMKQSG 233
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ P+ ++ L+ FCKE M A + VDM R GH P E +SL+ K+ S+A
Sbjct: 234 LKPNVVSYSTLVDAFCKEDMMQQAIKFYVDMRRVGHVPNEFTYTSLVDANCKIGNLSDAF 293
Query: 121 SVYN 124
+ N
Sbjct: 294 RLAN 297
>gi|356510925|ref|XP_003524184.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Glycine max]
Length = 594
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 30/127 (23%), Positives = 63/127 (49%)
Query: 29 DVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYMLAYRTM 88
D+V+ S++ +C+ ++ MH++ ++ ++ PD T+ LI FC+ + A
Sbjct: 356 DIVVFTSLIHGWCKDKNINKAMHLLEEMSKMGFVPDVATWTTLIGGFCQAGRPLAAKELF 415
Query: 89 VDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVYNMLRYSKRSMCKALHEKILHILISG 148
++MH+ G P + C+ ++ L K SEA+S+ + S + ++ +L + S
Sbjct: 416 LNMHKYGQVPNLQTCAVILDGLCKENLLSEAVSLAKAMEKSNLDLNIVIYSILLDGMCSA 475
Query: 149 KLLKDAY 155
L A+
Sbjct: 476 GKLNAAW 482
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 34/158 (21%), Positives = 68/158 (43%), Gaps = 1/158 (0%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ C G + LA E + DV ++ C+TGD + + +RK++E
Sbjct: 153 LINGLCVQGNVAQAVGLADHMEKMWYPLDVYTYGVLINGLCKTGDTLAAVGWLRKMEERN 212
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
P+ + ++ CK+ + A +M+ KG +P + LI L EA
Sbjct: 213 WKPNVVVYSTIMDGLCKDGLVSEALNLCSEMNGKGVRPNLVTYACLIQGLCNFGRWKEAG 272
Query: 121 SVYN-MLRYSKRSMCKALHEKILHILISGKLLKDAYIV 157
S+ + M++ R + L+ + GK+++ ++
Sbjct: 273 SLLDEMMKMGMRPDLQMLNILVDAFCKEGKVMQAKSVI 310
Score = 43.5 bits (101), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 28/131 (21%), Positives = 56/131 (42%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ C+ G E L + K + ++V ++ C G + ++ ++ ++
Sbjct: 223 IMDGLCKDGLVSEALNLCSEMNGKGVRPNLVTYACLIQGLCNFGRWKEAGSLLDEMMKMG 282
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ PD +IL+ FCKE M A + M G P+ +SLI +EA+
Sbjct: 283 MRPDLQMLNILVDAFCKEGKVMQAKSVIGFMILTGEGPDVFTYNSLIHIYCLQNKMNEAM 342
Query: 121 SVYNMLRYSKR 131
V++++ R
Sbjct: 343 RVFHLMVSRGR 353
Score = 37.7 bits (86), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 26/107 (24%), Positives = 48/107 (44%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C G ++E L + + D+ +LN ++ A+C+ G + V+ +
Sbjct: 258 LIQGLCNFGRWKEAGSLLDEMMKMGMRPDLQMLNILVDAFCKEGKVMQAKSVIGFMILTG 317
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLI 107
PD T++ LI +C + A R M +G P+ + +SLI
Sbjct: 318 EGPDVFTYNSLIHIYCLQNKMNEAMRVFHLMVSRGRLPDIVVFTSLI 364
>gi|357518651|ref|XP_003629614.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355523636|gb|AET04090.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 592
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 32/126 (25%), Positives = 65/126 (51%)
Query: 29 DVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYMLAYRTM 88
D+V S++ +C+ ++ MH++ ++ ++ +PD T+ LI FC+ + A
Sbjct: 355 DIVAYTSLIHGWCKIKNINKAMHLLDEMIKVGFTPDVVTWTTLIGGFCQVGRPLAAKELF 414
Query: 89 VDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVYNMLRYSKRSMCKALHEKILHILISG 148
++MH+ G P + C+ ++ L K + SEALS+++ + S + ++ IL + S
Sbjct: 415 LNMHKYGQVPNLQTCAIILDGLCKSQLLSEALSLFHAMEKSNLDLNIVIYSIILDGMCSA 474
Query: 149 KLLKDA 154
L A
Sbjct: 475 GKLNTA 480
Score = 40.0 bits (92), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 27/126 (21%), Positives = 52/126 (41%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ C+ G E L + K K ++V ++ C G + ++ ++ ++
Sbjct: 222 VMDGLCKDGLVSEALGLCLEMSGKGIKPNLVTYTCLIQGLCNFGRWKEAGSLLDEMMKMG 281
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ PD + +IL+ CKE M A + M G P+ +SLI EA
Sbjct: 282 VMPDLQSLNILVDVLCKEGKIMQAKSVIGFMILVGEVPDVFTYNSLIDRYCLQNQMDEAT 341
Query: 121 SVYNML 126
V+ ++
Sbjct: 342 RVFELM 347
>gi|357118215|ref|XP_003560853.1| PREDICTED: pentatricopeptide repeat-containing protein At3g61520,
mitochondrial-like [Brachypodium distachyon]
Length = 597
Score = 59.7 bits (143), Expect = 4e-07, Method: Composition-based stats.
Identities = 37/127 (29%), Positives = 59/127 (46%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I FCR E +L G+ + + DV N++L C+ GD +V ++ K+ +
Sbjct: 394 LIGGFCRRKRLNEAYELLGEMKEAGLQPDVYTYNTLLSGLCKAGDFLAVDELLGKMIDGG 453
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
P TF LI +CK A R M G QP + ++LI L K R S A+
Sbjct: 454 CRPSVVTFGTLIHGYCKVGQIDEALRIFRSMDESGIQPNTVIYNTLIDFLCKSRDTSLAI 513
Query: 121 SVYNMLR 127
+++ +R
Sbjct: 514 ELFDEMR 520
Score = 53.9 bits (128), Expect = 2e-05, Method: Composition-based stats.
Identities = 26/98 (26%), Positives = 48/98 (48%), Gaps = 1/98 (1%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++S C++G F +L G + VV +++ YC+ G ++ + + R +DE
Sbjct: 429 LLSGLCKAGDFLAVDELLGKMIDGGCRPSVVTFGTLIHGYCKVGQIDEALRIFRSMDESG 488
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQP 98
I P+ ++ LI + CK + LA + D R+ H P
Sbjct: 489 IQPNTVIYNTLIDFLCKSRDTSLAIE-LFDEMREKHVP 525
Score = 40.4 bits (93), Expect = 0.28, Method: Composition-based stats.
Identities = 26/129 (20%), Positives = 54/129 (41%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
MIS ++G ++ +A + + D N ++ +CR + ++ ++ E
Sbjct: 359 MISGLTQAGRLDDAWSMATSMKKAGFQLDAKAYNILIGGFCRRKRLNEAYELLGEMKEAG 418
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ PD T++ L+ CK ++ + M G +P +LI K+ EAL
Sbjct: 419 LQPDVYTYNTLLSGLCKAGDFLAVDELLGKMIDGGCRPSVVTFGTLIHGYCKVGQIDEAL 478
Query: 121 SVYNMLRYS 129
++ + S
Sbjct: 479 RIFRSMDES 487
Score = 35.0 bits (79), Expect = 9.3, Method: Composition-based stats.
Identities = 19/84 (22%), Positives = 38/84 (45%)
Query: 29 DVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYMLAYRTM 88
D ++ +M+ + G ++ + + + D ++ILI FC+ K AY +
Sbjct: 352 DAIMYFTMISGLTQAGRLDDAWSMATSMKKAGFQLDAKAYNILIGGFCRRKRLNEAYELL 411
Query: 89 VDMHRKGHQPEEELCSSLIFHLGK 112
+M G QP+ ++L+ L K
Sbjct: 412 GEMKEAGLQPDVYTYNTLLSGLCK 435
>gi|449530359|ref|XP_004172163.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g02860-like [Cucumis sativus]
Length = 831
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 35/141 (24%), Positives = 70/141 (49%)
Query: 5 FCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPD 64
+ R+ FE+++ + + AK K D++ N+++ AYCR G M+ + ++ + ++PD
Sbjct: 686 YSRTEHFEKSEDILREIIAKGMKPDIISFNTVIFAYCRNGRMKEASRIFAEMKDFGLAPD 745
Query: 65 YNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVYN 124
T++ I + + M++ A + M + +P + +SLI K+ EA S +
Sbjct: 746 VITYNTFIASYASDSMFIEAIDVVKYMIKNECKPNQNTYNSLIDWFCKLNRRDEANSFIS 805
Query: 125 MLRYSKRSMCKALHEKILHIL 145
LR S+ K ++L L
Sbjct: 806 NLRNLDPSVTKDEERRLLERL 826
Score = 40.0 bits (92), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 22/93 (23%), Positives = 49/93 (52%), Gaps = 7/93 (7%)
Query: 8 SGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNT 67
SG F+E K+ AG F + D + N+++ AY R G + M + R++ + ++PD +T
Sbjct: 486 SGVFKEMKR-AG-FVPERDTF-----NTLISAYSRCGFFDQAMAIYRRMLDAGVTPDLST 538
Query: 68 FHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEE 100
++ ++ + ++ + + + +M +P E
Sbjct: 539 YNAVLAALARGGLWEQSEKVLAEMKDGRCKPNE 571
Score = 38.1 bits (87), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 29/132 (21%), Positives = 58/132 (43%), Gaps = 1/132 (0%)
Query: 29 DVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYMLAYRTM 88
D+ S++ AY G + V +KL+E P T+++++ + K M +
Sbjct: 219 DIYAYTSLITAYASNGRYREAVMVFKKLEEEGCRPTLITYNVILNVYGKMGMPWSKIAGL 278
Query: 89 VD-MHRKGHQPEEELCSSLIFHLGKMRAHSEALSVYNMLRYSKRSMCKALHEKILHILIS 147
VD M G P+ ++LI + + EA V+ ++ + S K + +L +
Sbjct: 279 VDSMKSSGVAPDLYTYNTLISSCRRGSLYEEAAEVFEEMKAAGFSPDKVTYNALLDVYGK 338
Query: 148 GKLLKDAYIVVK 159
+ ++A V+K
Sbjct: 339 SRRPREAMEVLK 350
Score = 37.4 bits (85), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 24/98 (24%), Positives = 44/98 (44%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ + +S E ++ + EA +V NS++ AY R G ++ M + ++ +
Sbjct: 332 LLDVYGKSRRPREAMEVLKEMEASGFAPSIVTYNSLISAYARDGLLDEAMELKSQMVKKG 391
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQP 98
I PD T+ L+ F K A + +M G QP
Sbjct: 392 IKPDVFTYTTLLSGFEKTGKDDYAMKVFEEMRVAGCQP 429
>gi|297832060|ref|XP_002883912.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297329752|gb|EFH60171.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 623
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 30/107 (28%), Positives = 58/107 (54%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I CR E +L K K D+V++N+++ +C TG+M+ +++++D +
Sbjct: 439 LIYVLCRRNKTREADELFEKVVGKGMKPDLVMMNTLMDGHCATGNMDRAFSLLKEMDRMN 498
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLI 107
I PD T++ L++ C E + A M +M R+G +P+ ++LI
Sbjct: 499 IDPDDVTYNCLMRGLCGEGKFEEARELMGEMKRRGIKPDHISYNTLI 545
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/112 (25%), Positives = 54/112 (48%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ C G FEE ++L G+ + + K D + N+++ Y + GD + V ++ L
Sbjct: 509 LMRGLCGEGKFEEARELMGEMKRRGIKPDHISYNTLISGYSKKGDTKHAFIVRDEMLSLG 568
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGK 112
+P T++ L+K K + LA + +M +G P + S+I + K
Sbjct: 569 FNPTLLTYNALLKGLSKNQDGELAEELLREMKSEGIVPNDSSFCSVIEAMSK 620
Score = 41.2 bits (95), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 18/78 (23%), Positives = 37/78 (47%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
MI+ C+ G ++ K G E+ K +V N+++ Y G +E ++ ++
Sbjct: 232 MINVLCKEGKLKKAKGFLGIMESFGIKPTIVTYNTLVQGYSLRGRIEGARMIISEMKSKG 291
Query: 61 ISPDYNTFHILIKYFCKE 78
PD T++ ++ + C E
Sbjct: 292 FQPDLQTYNPILSWMCNE 309
>gi|121489753|emb|CAK18848.1| salt-inducible protein precursor [Phillyrea latifolia]
Length = 163
Score = 58.9 bits (141), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 29/120 (24%), Positives = 59/120 (49%), Gaps = 1/120 (0%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+++ C+ C + + L D + + YDVV N++ YCRTG E H++ + +
Sbjct: 44 VVNGLCKEECVDVARSLV-DAMKRTNMYDVVTFNTLFNGYCRTGKFEEASHLLVNMRKEG 102
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
I + T +ILI + C+ +++ A + M + P+ C++L+ + K + E +
Sbjct: 103 ILANTVTCNILISFLCRFRLFQQAKEVVKTMVAQDLNPDFVTCTTLLANFSKKSSSEEVM 162
Score = 35.8 bits (81), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 17/69 (24%), Positives = 40/69 (57%), Gaps = 1/69 (1%)
Query: 28 YDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYMLAYRT 87
+D+V +M+ YC+ GD +S + V + ++ +P+ ++ ++ CKE+ +A R+
Sbjct: 1 HDLVTYGTMIDGYCKVGDTKSAVEVYMDMVKMEKNPNLVIYNSVVNGLCKEECVDVA-RS 59
Query: 88 MVDMHRKGH 96
+VD ++ +
Sbjct: 60 LVDAMKRTN 68
>gi|224113413|ref|XP_002316488.1| predicted protein [Populus trichocarpa]
gi|222865528|gb|EEF02659.1| predicted protein [Populus trichocarpa]
Length = 941
Score = 58.5 bits (140), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 35/156 (22%), Positives = 75/156 (48%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ A C+SG + + + A+ + + N ++ + R GD+ +M+++++
Sbjct: 685 LLKACCKSGRMQSALAVTREMNAQKIPRNTFVYNILIDGWARRGDIWEAADLMQQMNQEG 744
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ PD +T+ I CK + A +TM +M G +P + ++LI +AL
Sbjct: 745 VQPDIHTYTSFINACCKAGDMLRATKTMEEMEAAGVKPNVKTYTTLIHGWANASLPEKAL 804
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLKDAYI 156
S + L+ + KA++ ++ L+S + +AYI
Sbjct: 805 SCFEELKLAGLKPDKAVYHCLMTSLLSRATVAEAYI 840
Score = 43.1 bits (100), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 28/117 (23%), Positives = 56/117 (47%)
Query: 27 KYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYMLAYR 86
K DVVL N+++ A+C G+M+ +H+++++ + P TF +I F + A
Sbjct: 536 KPDVVLYNNIIKAFCGMGNMDRAIHMVKEMQKERCRPTSRTFMPIIHGFARAGEMRRALE 595
Query: 87 TMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVYNMLRYSKRSMCKALHEKILH 143
M R G P ++L+ L + R +A+ + + + + S + + I+H
Sbjct: 596 IFDMMRRSGCIPTVHTFNALVLGLVEKRKMEKAVEILDEMALAGVSPDEHTYTTIMH 652
>gi|302792252|ref|XP_002977892.1| hypothetical protein SELMODRAFT_107734 [Selaginella moellendorffii]
gi|300154595|gb|EFJ21230.1| hypothetical protein SELMODRAFT_107734 [Selaginella moellendorffii]
Length = 500
Score = 58.5 bits (140), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 40/138 (28%), Positives = 64/138 (46%), Gaps = 14/138 (10%)
Query: 1 MISAFCRSGCFEETKQLAGD-FEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDEL 59
+I C+ G +E L G ++ + V NS++ +CR G M+ M+++ ++ E
Sbjct: 191 LIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDEAMNLLERMAET 250
Query: 60 AISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPE--------EELC-----SSL 106
SPD T+ L+ FCK AY + M RKG P+ + LC S
Sbjct: 251 GSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPDVVTFTSLMDGLCRENRLSDA 310
Query: 107 IFHLGKMRAHSEALSVYN 124
+ LG+MR S + +VY
Sbjct: 311 VHILGEMRRKSCSPTVYT 328
Score = 43.9 bits (102), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 29/123 (23%), Positives = 54/123 (43%), Gaps = 2/123 (1%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ CR + + G+ K V N++L YCR +E M L+E+
Sbjct: 297 LMDGLCRENRLSDAVHILGEMRRKSCSPTVYTYNTILDGYCRANQLEEARKFM--LEEMD 354
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
P+ +F+I+I+ CK A + + R+ P+ + +++I L + + EA
Sbjct: 355 CPPNVVSFNIMIRGLCKVNRSSEAMELVEEARRRRCNPDVVMYTTVIDGLCREKKVDEAC 414
Query: 121 SVY 123
VY
Sbjct: 415 RVY 417
Score = 36.6 bits (83), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 36/148 (24%), Positives = 57/148 (38%), Gaps = 4/148 (2%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C+ G +E L K V NS++ C+ ++ ++
Sbjct: 87 LIDGLCKGGRVDEAVALLSKMRKKCVPT-AVTYNSLISGLCKAERASEAYDLLEEMVYSG 145
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
PD T+ LI FCK K A R + +G +P+ S LI L K EA+
Sbjct: 146 CIPDIFTYTTLITGFCKSKKSDDALRVFEQLVARGFRPDVVTYSCLIDGLCKEGRLKEAI 205
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISG 148
++ + S M + + LISG
Sbjct: 206 DLFGRMIKSGSCMPNTV---TYNSLISG 230
>gi|302795346|ref|XP_002979436.1| hypothetical protein SELMODRAFT_177686 [Selaginella moellendorffii]
gi|300152684|gb|EFJ19325.1| hypothetical protein SELMODRAFT_177686 [Selaginella moellendorffii]
Length = 500
Score = 58.5 bits (140), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 40/138 (28%), Positives = 64/138 (46%), Gaps = 14/138 (10%)
Query: 1 MISAFCRSGCFEETKQLAGD-FEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDEL 59
+I C+ G +E L G ++ + V NS++ +CR G M+ M+++ ++ E
Sbjct: 191 LIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDEAMNLLERMAET 250
Query: 60 AISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPE--------EELC-----SSL 106
SPD T+ L+ FCK AY + M RKG P+ + LC S
Sbjct: 251 GSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPDVVTFTSLMDGLCRENRLSDA 310
Query: 107 IFHLGKMRAHSEALSVYN 124
+ LG+MR S + +VY
Sbjct: 311 VHILGEMRRKSCSPTVYT 328
Score = 43.9 bits (102), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 29/123 (23%), Positives = 54/123 (43%), Gaps = 2/123 (1%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ CR + + G+ K V N++L YCR +E M L+E+
Sbjct: 297 LMDGLCRENRLSDAVHILGEMRRKSCSPTVYTYNTILDGYCRANQLEEARKFM--LEEMD 354
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
P+ +F+I+I+ CK A + + R+ P+ + +++I L + + EA
Sbjct: 355 CPPNVVSFNIMIRGLCKVNRSSEAMELVEEARRRRCNPDVVMYTTVIDGLCREKKVDEAC 414
Query: 121 SVY 123
VY
Sbjct: 415 RVY 417
Score = 36.2 bits (82), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 36/148 (24%), Positives = 57/148 (38%), Gaps = 4/148 (2%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C+ G +E L K V NS++ C+ ++ ++
Sbjct: 87 LIDGLCKGGRVDEAVALLSKMRKKCVPT-AVTYNSLISGLCKAERASEAYDLLEEMVYSG 145
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
PD T+ LI FCK K A R + +G +P+ S LI L K EA+
Sbjct: 146 CIPDIFTYTTLITGFCKSKKSDDALRVFEQLVARGFRPDVVTYSCLIDGLCKEGRLKEAI 205
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISG 148
++ + S M + + LISG
Sbjct: 206 DLFGRMIKSGSCMPNTV---TYNSLISG 230
>gi|356499079|ref|XP_003518371.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g09680-like [Glycine max]
Length = 615
Score = 58.5 bits (140), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 50/101 (49%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ C+ G +E ++L + A K D + +++ C+ GDMES + + R++ E
Sbjct: 394 LINGLCKVGDLKEARRLVNEMTASGLKPDKITFTTLIDGCCKDGDMESALEIKRRMVEEG 453
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEE 101
I D F LI C+E A R + DM G +P++
Sbjct: 454 IELDDVAFTALISGLCREGRVHDAGRMLTDMLSAGFKPDDP 494
Score = 42.4 bits (98), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 19/78 (24%), Positives = 38/78 (48%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ FC++G + + + + + VV N+++ C++GD+E + ++
Sbjct: 254 LMHGFCKAGDVGNARLVFDEIPKRGLRPTVVSFNTLISGCCKSGDVEEGFRLKGVMESEG 313
Query: 61 ISPDYNTFHILIKYFCKE 78
+ PD TF LI CKE
Sbjct: 314 VCPDVFTFSALINGLCKE 331
Score = 35.4 bits (80), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 25/105 (23%), Positives = 49/105 (46%), Gaps = 1/105 (0%)
Query: 23 AKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYM 82
A+ + D+V N+++ C+ GD++ ++ ++ + PD TF LI CK+
Sbjct: 381 AQGVRPDLVTYNALINGLCKVGDLKEARRLVNEMTASGLKPDKITFTTLIDGCCKDGDME 440
Query: 83 LAYRTMVDMHRKGHQPEEELCSSLIFHLGK-MRAHSEALSVYNML 126
A M +G + ++ ++LI L + R H + +ML
Sbjct: 441 SALEIKRRMVEEGIELDDVAFTALISGLCREGRVHDAGRMLTDML 485
>gi|225429339|ref|XP_002269471.1| PREDICTED: pentatricopeptide repeat-containing protein At5g02860
[Vitis vinifera]
Length = 811
Score = 58.5 bits (140), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 32/123 (26%), Positives = 62/123 (50%)
Query: 5 FCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPD 64
+ RS FE ++++ + AK + D++ N+++ AYCR G M V+ ++ E +PD
Sbjct: 666 YSRSANFERSEEILREILAKGIRPDIISYNTVIYAYCRNGRMRDASRVLSEMRESGPAPD 725
Query: 65 YNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVYN 124
T++ I + + M++ A + M + G +P + +S++ K+ EA N
Sbjct: 726 IITYNTFIASYAADSMFVEAIDVVCYMIKHGCKPNQSTYNSIVDWYCKLNRRDEASMFVN 785
Query: 125 MLR 127
LR
Sbjct: 786 NLR 788
Score = 44.7 bits (104), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 32/158 (20%), Positives = 69/158 (43%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++S F ++G + Q+ + + K ++ N+++ + G +M V +
Sbjct: 382 LLSGFEKAGKDKAAVQIFEEMRNEGCKPNICTFNALIKMHGNRGKFTEMMKVFEDIKTFQ 441
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
SPD T++ L+ F + M +M R G PE + ++LI + + +A+
Sbjct: 442 CSPDIVTWNTLLSVFGQNGMDSEVSGVFKEMKRAGFVPERDTFNTLISSYSRCGSFDQAM 501
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLKDAYIVV 158
+VY + + + + + +L L G L K + V+
Sbjct: 502 AVYKRMLEAGVNPDLSSYNAVLAALARGGLWKQSEKVL 539
Score = 40.0 bits (92), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 28/123 (22%), Positives = 55/123 (44%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ + +S +E ++ + E +V NS++ AY R G +E + + ++ E
Sbjct: 312 LLDVYGKSRRSKEAMEVLQEMEGNGCPPSIVTYNSLISAYARDGLLEDALELKNQMVEKG 371
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
I PD T+ L+ F K A + +M +G +P ++LI G +E +
Sbjct: 372 IKPDVFTYTTLLSGFEKAGKDKAAVQIFEEMRNEGCKPNICTFNALIKMHGNRGKFTEMM 431
Query: 121 SVY 123
V+
Sbjct: 432 KVF 434
Score = 39.3 bits (90), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 21/93 (22%), Positives = 49/93 (52%), Gaps = 7/93 (7%)
Query: 8 SGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNT 67
SG F+E K+ AG F + D + N+++ +Y R G + M V +++ E ++PD ++
Sbjct: 466 SGVFKEMKR-AG-FVPERDTF-----NTLISSYSRCGSFDQAMAVYKRMLEAGVNPDLSS 518
Query: 68 FHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEE 100
++ ++ + ++ + + + +M +P E
Sbjct: 519 YNAVLAALARGGLWKQSEKVLAEMKDGRCKPNE 551
>gi|296083087|emb|CBI22491.3| unnamed protein product [Vitis vinifera]
Length = 548
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/123 (26%), Positives = 62/123 (50%)
Query: 5 FCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPD 64
+ RS FE ++++ + AK + D++ N+++ AYCR G M V+ ++ E +PD
Sbjct: 394 YSRSANFERSEEILREILAKGIRPDIISYNTVIYAYCRNGRMRDASRVLSEMRESGPAPD 453
Query: 65 YNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVYN 124
T++ I + + M++ A + M + G +P + +S++ K+ EA N
Sbjct: 454 IITYNTFIASYAADSMFVEAIDVVCYMIKHGCKPNQSTYNSIVDWYCKLNRRDEASMFVN 513
Query: 125 MLR 127
LR
Sbjct: 514 NLR 516
Score = 44.3 bits (103), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 32/158 (20%), Positives = 69/158 (43%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++S F ++G + Q+ + + K ++ N+++ + G +M V +
Sbjct: 110 LLSGFEKAGKDKAAVQIFEEMRNEGCKPNICTFNALIKMHGNRGKFTEMMKVFEDIKTFQ 169
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
SPD T++ L+ F + M +M R G PE + ++LI + + +A+
Sbjct: 170 CSPDIVTWNTLLSVFGQNGMDSEVSGVFKEMKRAGFVPERDTFNTLISSYSRCGSFDQAM 229
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLKDAYIVV 158
+VY + + + + + +L L G L K + V+
Sbjct: 230 AVYKRMLEAGVNPDLSSYNAVLAALARGGLWKQSEKVL 267
Score = 38.9 bits (89), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 21/93 (22%), Positives = 49/93 (52%), Gaps = 7/93 (7%)
Query: 8 SGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNT 67
SG F+E K+ AG F + D + N+++ +Y R G + M V +++ E ++PD ++
Sbjct: 194 SGVFKEMKR-AG-FVPERDTF-----NTLISSYSRCGSFDQAMAVYKRMLEAGVNPDLSS 246
Query: 68 FHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEE 100
++ ++ + ++ + + + +M +P E
Sbjct: 247 YNAVLAALARGGLWKQSEKVLAEMKDGRCKPNE 279
>gi|15237662|ref|NP_201237.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75171655|sp|Q9FMF6.1|PP444_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g64320, mitochondrial; Flags: Precursor
gi|9759408|dbj|BAB09863.1| unnamed protein product [Arabidopsis thaliana]
gi|332010486|gb|AED97869.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 730
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 40/77 (51%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ CRSG EE + + + D+V NS++ CR G +E + + RKL
Sbjct: 605 LINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEG 664
Query: 61 ISPDYNTFHILIKYFCK 77
I PD TF+ L+ + CK
Sbjct: 665 IPPDTVTFNTLMSWLCK 681
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/154 (22%), Positives = 66/154 (42%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+AF R G +E ++L + + D + NS++ CR G+++ + K+
Sbjct: 535 LINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDG 594
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+P + +ILI C+ M A +M +G P+ +SLI L + + L
Sbjct: 595 HAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGL 654
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLKDA 154
+++ L+ ++ L G + DA
Sbjct: 655 TMFRKLQAEGIPPDTVTFNTLMSWLCKGGFVYDA 688
Score = 41.6 bits (96), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 32/163 (19%), Positives = 68/163 (41%), Gaps = 20/163 (12%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ FC+ G +E + + A K + V N ++ A+C+ + + + R++
Sbjct: 430 LVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKG 489
Query: 61 ISPDYNTFHILIKYFC-----KEKMYML-------------AYRTMVDMH-RKGHQPE-E 100
PD TF+ LI C K +++L Y T+++ R+G E
Sbjct: 490 CKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEAR 549
Query: 101 ELCSSLIFHLGKMRAHSEALSVYNMLRYSKRSMCKALHEKILH 143
+L + ++F + + + + R + ++L EK+L
Sbjct: 550 KLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLR 592
Score = 41.6 bits (96), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 27/110 (24%), Positives = 50/110 (45%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I + + G ++ D K K +V ++ +C+ G ++ +V+ ++
Sbjct: 395 LIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADG 454
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHL 110
+ P+ F+ LI FCKE A +M RKG +P+ +SLI L
Sbjct: 455 LKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGL 504
Score = 40.8 bits (94), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 37/149 (24%), Positives = 60/149 (40%), Gaps = 5/149 (3%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKY-DVVLLNSMLCAYCRTGDMESVMHVMRKLDEL 59
+I F G ++ K + D Y DV NS++ Y + G + + V+ +
Sbjct: 359 LIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNK 418
Query: 60 AISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEA 119
P+ ++ IL+ FCK AY + +M G +P + LI K EA
Sbjct: 419 GCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEA 478
Query: 120 LSVYNMLRYSKRSMCKALHEKILHILISG 148
+ ++ R R CK + LISG
Sbjct: 479 VEIF---REMPRKGCKP-DVYTFNSLISG 503
>gi|242077973|ref|XP_002443755.1| hypothetical protein SORBIDRAFT_07g001380 [Sorghum bicolor]
gi|241940105|gb|EES13250.1| hypothetical protein SORBIDRAFT_07g001380 [Sorghum bicolor]
Length = 871
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/155 (23%), Positives = 71/155 (45%), Gaps = 10/155 (6%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
MI C+S +EE + L D + VV N+++ +Y R+G+++ M ++ +++E
Sbjct: 238 MIFGCCQSNEWEEARMLLDDMRREGTLPGVVTWNTLISSYARSGELDVAMEMLEQMEESG 297
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
++PD T+ L+ F A R + M G +P +S I +R S+ +
Sbjct: 298 VAPDVVTWTSLVSGFVHSDRSGEALRCFMRMRLAGVEPNGMTIASAISACASLRLLSQGM 357
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLKDAY 155
++ C A+ ++ ++SG L D Y
Sbjct: 358 ELH----------CHAIKVGSVNNVLSGNSLVDMY 382
Score = 37.4 bits (85), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 22/92 (23%), Positives = 42/92 (45%), Gaps = 4/92 (4%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
MIS + R+G E +L E+ K D N+++ G + + + R++ L
Sbjct: 444 MISGYIRNGDDERAFELFQMMESYGVKRDTASWNALIAGSVHNGHSDRALRIFRQMQSLL 503
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMH 92
+ PDY T +I F ++A+ + ++H
Sbjct: 504 VRPDYITILSIIPAFAN----LVAFSKVREIH 531
>gi|255542744|ref|XP_002512435.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223548396|gb|EEF49887.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 546
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/157 (24%), Positives = 74/157 (47%), Gaps = 3/157 (1%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCR---TGDMESVMHVMRKLD 57
+I+ C+ G + + D + + +V+ N+++ YC+ G M +++++
Sbjct: 169 VINGLCKVGKLNKAGDIIEDMKVRGVSANVITYNTLIDGYCKMGKIGKMYKADAILKEMR 228
Query: 58 ELAISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHS 117
I P+ TF+ILI FCK+K A + +M+R+G +P +SLI L +
Sbjct: 229 ADGICPNEVTFNILIDGFCKDKNVSAAMKVFAEMNRQGVKPNVVTYNSLINGLCNNGKVN 288
Query: 118 EALSVYNMLRYSKRSMCKALHEKILHILISGKLLKDA 154
EA ++ + + S H +L+ K++K A
Sbjct: 289 EATALRDQMVNSCLKPNIITHNALLNGFCKNKMVKQA 325
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/96 (22%), Positives = 46/96 (47%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ CR G E + L + + K+ K D++ N ++ + C G+M+ + ++ ++
Sbjct: 382 LIAGLCRKGDLEAARNLVSEMDTKHLKADLITYNILIDSLCNKGEMKKALRLLDEMCRKG 441
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGH 96
+ P T++ +I +CKE A M + G
Sbjct: 442 LKPSQLTYNTMIDGYCKEGNLRAALNLRSQMEKVGR 477
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/107 (27%), Positives = 53/107 (49%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I A+C+ E+ L K DV N ++ CR GD+E+ +++ ++D
Sbjct: 347 LIDAYCKDENMEDAFALYRIMLGKGVCPDVSTYNCLIAGLCRKGDLEAARNLVSEMDTKH 406
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLI 107
+ D T++ILI C + A R + +M RKG +P + +++I
Sbjct: 407 LKADLITYNILIDSLCNKGEMKKALRLLDEMCRKGLKPSQLTYNTMI 453
Score = 43.9 bits (102), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 28/126 (22%), Positives = 53/126 (42%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I FC+ ++ + + K +VV NS++ C G + + ++
Sbjct: 242 LIDGFCKDKNVSAAMKVFAEMNRQGVKPNVVTYNSLINGLCNNGKVNEATALRDQMVNSC 301
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ P+ T + L+ FCK KM A DM ++G P + LI K +A
Sbjct: 302 LKPNIITHNALLNGFCKNKMVKQAGELFDDMPKQGITPNVTTYNILIDAYCKDENMEDAF 361
Query: 121 SVYNML 126
++Y ++
Sbjct: 362 ALYRIM 367
Score = 42.4 bits (98), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 23/99 (23%), Positives = 51/99 (51%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I + C G ++ +L + K K + N+M+ YC+ G++ + +++ +++++
Sbjct: 417 LIDSLCNKGEMKKALRLLDEMCRKGLKPSQLTYNTMIDGYCKEGNLRAALNLRSQMEKVG 476
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPE 99
+ T+++LIK FCK+ A + +M KG P
Sbjct: 477 RLANVATYNVLIKGFCKKDKLEDANGLLNEMLEKGLIPN 515
Score = 40.8 bits (94), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 25/110 (22%), Positives = 50/110 (45%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ C +G E L K +++ N++L +C+ ++ + + +
Sbjct: 277 LINGLCNNGKVNEATALRDQMVNSCLKPNIITHNALLNGFCKNKMVKQAGELFDDMPKQG 336
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHL 110
I+P+ T++ILI +CK++ A+ M KG P+ + LI L
Sbjct: 337 ITPNVTTYNILIDAYCKDENMEDAFALYRIMLGKGVCPDVSTYNCLIAGL 386
Score = 39.7 bits (91), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 22/89 (24%), Positives = 45/89 (50%), Gaps = 1/89 (1%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+++ FC++ ++ +L D + +V N ++ AYC+ +ME + R +
Sbjct: 312 LLNGFCKNKMVKQAGELFDDMPKQGITPNVTTYNILIDAYCKDENMEDAFALYRIMLGKG 371
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMV 89
+ PD +T++ LI C+ K + A R +V
Sbjct: 372 VCPDVSTYNCLIAGLCR-KGDLEAARNLV 399
>gi|359490016|ref|XP_002275236.2| PREDICTED: pentatricopeptide repeat-containing protein At3g18110,
chloroplastic-like [Vitis vinifera]
Length = 1442
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/122 (30%), Positives = 58/122 (47%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
MIS + R G E +L D E+K D V NS+L A+ R G+++ V + + ++
Sbjct: 335 MISVYGRCGMSREAGRLFKDLESKGFLPDAVTYNSLLYAFAREGNVDKVKEICEDMVKMG 394
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
D T++ +I + K + LA++ DM G P+ + LI LGK EA
Sbjct: 395 FGKDEMTYNTIIHMYGKRGQHDLAFQLYSDMKLSGRSPDAVTYTVLIDSLGKANMIKEAA 454
Query: 121 SV 122
V
Sbjct: 455 EV 456
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 31/126 (24%), Positives = 59/126 (46%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
MI + + + + + E K D+ + NS+L Y GD + V + + E
Sbjct: 893 MIGLLAKGKRVRDVEAMVSEMEVARFKPDLSIWNSVLKLYTGIGDFKKTGQVYQLIQEAG 952
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ PD +T++ LI +C+++ M +M R G +P+ + SLI GK++ +A
Sbjct: 953 LKPDEDTYNTLILMYCRDRRPEEGLSLMHEMRRVGLEPKLDTYKSLISAFGKLQMVEQAE 1012
Query: 121 SVYNML 126
++ L
Sbjct: 1013 ELFEGL 1018
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 37/154 (24%), Positives = 66/154 (42%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+ISA R EE ++ D A + D+ N+M+ Y R G + + L+
Sbjct: 300 LISACSRESNLEEAVKVYNDMVAHRCQPDLWTYNAMISVYGRCGMSREAGRLFKDLESKG 359
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
PD T++ L+ F +E DM + G +E +++I GK H A
Sbjct: 360 FLPDAVTYNSLLYAFAREGNVDKVKEICEDMVKMGFGKDEMTYNTIIHMYGKRGQHDLAF 419
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLKDA 154
+Y+ ++ S RS + ++ L ++K+A
Sbjct: 420 QLYSDMKLSGRSPDAVTYTVLIDSLGKANMIKEA 453
Score = 39.3 bits (90), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 44/97 (45%), Gaps = 2/97 (2%)
Query: 30 VVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYM--LAYRT 87
V + N+M+ Y RTG V ++ + PD +F+ LI K + LA
Sbjct: 222 VQVYNAMMGVYARTGRFTKVQELLDLMRSRGCEPDLVSFNTLINARLKSGTMVTNLAIEL 281
Query: 88 MVDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVYN 124
+ ++ R G QP+ ++LI + EA+ VYN
Sbjct: 282 LNEVRRSGIQPDIITYNTLISACSRESNLEEAVKVYN 318
Score = 35.8 bits (81), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 28/128 (21%), Positives = 60/128 (46%), Gaps = 2/128 (1%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMES--VMHVMRKLDE 58
M+ + R+G F + ++L ++ + D+V N+++ A ++G M + + ++ ++
Sbjct: 228 MMGVYARTGRFTKVQELLDLMRSRGCEPDLVSFNTLINARLKSGTMVTNLAIELLNEVRR 287
Query: 59 LAISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSE 118
I PD T++ LI +E A + DM QP+ +++I G+ E
Sbjct: 288 SGIQPDIITYNTLISACSRESNLEEAVKVYNDMVAHRCQPDLWTYNAMISVYGRCGMSRE 347
Query: 119 ALSVYNML 126
A ++ L
Sbjct: 348 AGRLFKDL 355
>gi|147840312|emb|CAN63985.1| hypothetical protein VITISV_001389 [Vitis vinifera]
Length = 850
Score = 58.2 bits (139), Expect = 1e-06, Method: Composition-based stats.
Identities = 31/99 (31%), Positives = 49/99 (49%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
MI+A C++ E TK D E K DVV N+++ AYCR G +E +M +
Sbjct: 364 MINALCKNQKIENTKSFLSDMEEKGVFPDVVTYNTLINAYCRQGLLEEAFELMDSMSGKG 423
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPE 99
+ P T++ +I CK Y+ A + +M + G P+
Sbjct: 424 LKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPD 462
Score = 55.8 bits (133), Expect = 6e-06, Method: Composition-based stats.
Identities = 36/127 (28%), Positives = 62/127 (48%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+A+CR G EE +L K K V N+++ C+TG V+ ++ ++
Sbjct: 399 LINAYCRQGLLEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIG 458
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+SPD T++IL+ C+ M A R +M +G P+ S+LI L K +AL
Sbjct: 459 MSPDTATYNILLVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQAL 518
Query: 121 SVYNMLR 127
+ ++
Sbjct: 519 KYFRDMK 525
Score = 44.7 bits (104), Expect = 0.013, Method: Composition-based stats.
Identities = 28/126 (22%), Positives = 58/126 (46%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I ++GC ++ + D + D V+ ++ +CR G M + V ++ E
Sbjct: 504 LIGLLSKNGCLDQALKYFRDMKNAGLAPDNVIYTILIGGFCRNGVMSEALKVRDEMLEQG 563
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
D T++ ++ CKEKM A +M +G P+ ++LI K ++A+
Sbjct: 564 CXLDVVTYNTILNGLCKEKMLSEADELFTEMTERGVFPDFYTFTTLINGYXKDGNMNKAV 623
Query: 121 SVYNML 126
+++ M+
Sbjct: 624 TLFEMM 629
Score = 43.5 bits (101), Expect = 0.030, Method: Composition-based stats.
Identities = 20/72 (27%), Positives = 38/72 (52%)
Query: 27 KYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYMLAYR 86
+ +V LN M+ A C+ +E+ + ++E + PD T++ LI +C++ + A+
Sbjct: 355 QVNVYTLNIMINALCKNQKIENTKSFLSDMEEKGVFPDVVTYNTLINAYCRQGLLEEAFE 414
Query: 87 TMVDMHRKGHQP 98
M M KG +P
Sbjct: 415 LMDSMSGKGLKP 426
Score = 43.1 bits (100), Expect = 0.039, Method: Composition-based stats.
Identities = 25/99 (25%), Positives = 45/99 (45%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ +C GC E +L + K + ++ N+++ YCR G+ + +
Sbjct: 679 LINGYCNMGCVSEAFRLWDEMVEKGFEATIITCNTIVKGYCRAGNAVKADEFLSNMLLKG 738
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPE 99
I PD T++ LI F KE+ A+ + M G P+
Sbjct: 739 IVPDGITYNTLINGFIKEENMDRAFALVNKMENSGLLPD 777
Score = 40.8 bits (94), Expect = 0.17, Method: Composition-based stats.
Identities = 30/127 (23%), Positives = 55/127 (43%), Gaps = 20/127 (15%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I FCR+G E ++ + + DVV N++L C+ + + ++ E
Sbjct: 539 LIGGFCRNGVMSEALKVRDEMLEQGCXLDVVTYNTILNGLCKEKMLSEADELFTEMTERG 598
Query: 61 ISPDYNTFHILIKYFCKE------------------KMYMLAYRTMVDMHRKGHQPEE-- 100
+ PD+ TF LI + K+ K ++ Y T++D KG + E+
Sbjct: 599 VFPDFYTFTTLINGYXKDGNMNKAVTLFEMMIQRNLKPDVVTYNTLIDGFCKGSEMEKVN 658
Query: 101 ELCSSLI 107
EL + +I
Sbjct: 659 ELWNDMI 665
Score = 40.0 bits (92), Expect = 0.29, Method: Composition-based stats.
Identities = 21/81 (25%), Positives = 41/81 (50%)
Query: 27 KYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYMLAYR 86
K DVV N+++ +C+ +ME V + + I P++ ++ ILI +C A+R
Sbjct: 635 KPDVVTYNTLIDGFCKGSEMEKVNELWNDMISRRIYPNHISYGILINGYCNMGCVSEAFR 694
Query: 87 TMVDMHRKGHQPEEELCSSLI 107
+M KG + C++++
Sbjct: 695 LWDEMVEKGFEATIITCNTIV 715
Score = 40.0 bits (92), Expect = 0.33, Method: Composition-based stats.
Identities = 34/154 (22%), Positives = 60/154 (38%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ C++G + K + + D N +L CR +M + ++
Sbjct: 434 IINGLCKTGKYLRAKGVLDEMLKIGMSPDTATYNILLVECCRNDNMMDAERIFDEMPSQG 493
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ PD +F LI K A + DM G P+ + + LI + SEAL
Sbjct: 494 VVPDLVSFSALIGLLSKNGCLDQALKYFRDMKNAGLAPDNVIYTILIGGFCRNGVMSEAL 553
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLKDA 154
V + + + + IL+ L K+L +A
Sbjct: 554 KVRDEMLEQGCXLDVVTYNTILNGLCKEKMLSEA 587
Score = 39.7 bits (91), Expect = 0.38, Method: Composition-based stats.
Identities = 20/74 (27%), Positives = 38/74 (51%)
Query: 29 DVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYMLAYRTM 88
DV+ N +L + R G M+ +M K+ E ++PD +T+ LI + A+R
Sbjct: 777 DVITYNVILNGFSRQGRMQEAELIMLKMIERGVNPDRSTYTSLINGHVTQNNLKEAFRVH 836
Query: 89 VDMHRKGHQPEEEL 102
+M ++G P+++
Sbjct: 837 DEMLQRGFVPDDKF 850
>gi|357494039|ref|XP_003617308.1| Auxin response factor [Medicago truncatula]
gi|355518643|gb|AET00267.1| Auxin response factor [Medicago truncatula]
Length = 948
Score = 58.2 bits (139), Expect = 1e-06, Method: Composition-based stats.
Identities = 37/127 (29%), Positives = 65/127 (51%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I AF R ++ +L G+ + D + N ++ A C+TG E + ++ ++
Sbjct: 518 LIHAFLRLELIQQADKLVGEMRFRGCPLDNITYNGLIKALCKTGATEKCLGLIEQMFGEE 577
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
I P N+ +ILI FC+ A + + DM ++G P+ +SLI L KM EAL
Sbjct: 578 IFPSINSCNILINSFCRTGKVNDALQFLRDMIQRGLTPDIVTYNSLINGLCKMGRFQEAL 637
Query: 121 SVYNMLR 127
+++N L+
Sbjct: 638 NLFNGLQ 644
Score = 54.3 bits (129), Expect = 2e-05, Method: Composition-based stats.
Identities = 32/122 (26%), Positives = 57/122 (46%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I++FCR+G + Q D + D+V NS++ C+ G + +++ L
Sbjct: 588 LINSFCRTGKVNDALQFLRDMIQRGLTPDIVTYNSLINGLCKMGRFQEALNLFNGLQAKG 647
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
I PD T++ LI +C E ++ A + + G P E S LI + K + SE
Sbjct: 648 IHPDAVTYNTLISRYCYEGLFNDACQLLFKGVSNGFIPNEITWSILINYFVKNNSDSEQF 707
Query: 121 SV 122
++
Sbjct: 708 TI 709
Score = 46.6 bits (109), Expect = 0.003, Method: Composition-based stats.
Identities = 27/92 (29%), Positives = 45/92 (48%), Gaps = 3/92 (3%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I FC+ G FEE ++ AK + V N ++ A C+ G ++ + + ++
Sbjct: 413 LIDGFCKQGHFEEASKVVNSMSAKGLSLNTVGYNCLIGALCKDGKIQDALQMYGEMSSKG 472
Query: 61 ISPDYNTFHILIKYFCK-EKM--YMLAYRTMV 89
PD TF+ LI CK +KM + YR M+
Sbjct: 473 CKPDIYTFNSLIYGLCKNDKMEEALGLYRDML 504
Score = 44.3 bits (103), Expect = 0.019, Method: Composition-based stats.
Identities = 32/154 (20%), Positives = 64/154 (41%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
MI C+ G + + K + +V+ ++ +C+ G E V+ +
Sbjct: 378 MIDGLCKKGYLVSALEFLDEMVKKGFEPNVITYTILIDGFCKQGHFEEASKVVNSMSAKG 437
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+S + ++ LI CK+ A + +M KG +P+ +SLI+ L K EAL
Sbjct: 438 LSLNTVGYNCLIGALCKDGKIQDALQMYGEMSSKGCKPDIYTFNSLIYGLCKNDKMEEAL 497
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLKDA 154
+Y + + ++H + +L++ A
Sbjct: 498 GLYRDMLLEGVIANTVTYNTLIHAFLRLELIQQA 531
Score = 43.9 bits (102), Expect = 0.025, Method: Composition-based stats.
Identities = 27/110 (24%), Positives = 53/110 (48%), Gaps = 6/110 (5%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNS---MLCAYCRTGDMESVMHVMRKLD 57
+I A C++G T++ G E + + +NS ++ ++CRTG + + +R +
Sbjct: 553 LIKALCKTGA---TEKCLGLIEQMFGEEIFPSINSCNILINSFCRTGKVNDALQFLRDMI 609
Query: 58 ELAISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLI 107
+ ++PD T++ LI CK + A + KG P+ ++LI
Sbjct: 610 QRGLTPDIVTYNSLINGLCKMGRFQEALNLFNGLQAKGIHPDAVTYNTLI 659
Score = 42.4 bits (98), Expect = 0.063, Method: Composition-based stats.
Identities = 28/122 (22%), Positives = 57/122 (46%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I A C+ G ++ Q+ G+ +K K D+ NS++ C+ ME + + R +
Sbjct: 448 LIGALCKDGKIQDALQMYGEMSSKGCKPDIYTFNSLIYGLCKNDKMEEALGLYRDMLLEG 507
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ + T++ LI F + ++ A + + +M +G + + LI L K A + L
Sbjct: 508 VIANTVTYNTLIHAFLRLELIQQADKLVGEMRFRGCPLDNITYNGLIKALCKTGATEKCL 567
Query: 121 SV 122
+
Sbjct: 568 GL 569
Score = 41.6 bits (96), Expect = 0.12, Method: Composition-based stats.
Identities = 33/127 (25%), Positives = 57/127 (44%), Gaps = 5/127 (3%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ CR G +E + + +K + VL N+++ Y +G E ++ K +A
Sbjct: 311 LMHGLCRMGKVDEARAML----SKIPNPNTVLYNTLINGYVVSGRFEEAKDLLYKNMVIA 366
Query: 61 -ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEA 119
PD TF+I+I CK+ + A + +M +KG +P + LI K EA
Sbjct: 367 GFEPDAFTFNIMIDGLCKKGYLVSALEFLDEMVKKGFEPNVITYTILIDGFCKQGHFEEA 426
Query: 120 LSVYNML 126
V N +
Sbjct: 427 SKVVNSM 433
Score = 40.4 bits (93), Expect = 0.23, Method: Composition-based stats.
Identities = 35/129 (27%), Positives = 55/129 (42%), Gaps = 11/129 (8%)
Query: 1 MISAFCRSGCFEETKQL------AGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMR 54
+I+ + SG FEE K L FE D N M+ C+ G + S + +
Sbjct: 342 LINGYVVSGRFEEAKDLLYKNMVIAGFEP-----DAFTFNIMIDGLCKKGYLVSALEFLD 396
Query: 55 KLDELAISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMR 114
++ + P+ T+ ILI FCK+ + A + + M KG + LI L K
Sbjct: 397 EMVKKGFEPNVITYTILIDGFCKQGHFEEASKVVNSMSAKGLSLNTVGYNCLIGALCKDG 456
Query: 115 AHSEALSVY 123
+AL +Y
Sbjct: 457 KIQDALQMY 465
>gi|255556189|ref|XP_002519129.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223541792|gb|EEF43340.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 643
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/119 (26%), Positives = 60/119 (50%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ CR G EE ++L + + + + D + N+++ Y + GD+ + ++ +
Sbjct: 522 LMQGRCREGKVEEARELLKEMKRRGIRPDHISYNTLISGYSKRGDINDAFTIRDEMLSIG 581
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEA 119
+P T++ LI+ CK + LA + +M KG P++ SLI +GK+ SEA
Sbjct: 582 FNPTLLTYNALIQGLCKNQQGDLAEELLKEMVSKGITPDDSTYFSLIEGIGKVDDSSEA 640
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 21/94 (22%), Positives = 53/94 (56%)
Query: 29 DVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYMLAYRTM 88
D+++ N+++ +C G+++ +++++D+ I PD T++ L++ C+E A +
Sbjct: 480 DLIMFNALIDGHCANGNLDRAFALLKEMDKRNIVPDEVTYNTLMQGRCREGKVEEARELL 539
Query: 89 VDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSV 122
+M R+G +P+ ++LI K ++A ++
Sbjct: 540 KEMKRRGIRPDHISYNTLISGYSKRGDINDAFTI 573
Score = 45.1 bits (105), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 29/107 (27%), Positives = 45/107 (42%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
MI+ C+ G ++ K G E K +VV N+++ YC G +E V+ +
Sbjct: 242 MINVLCKEGKLKKAKDFIGSMENLGVKPNVVTYNTVIHGYCSRGRVEGARMVLDIMKNRG 301
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLI 107
+ PD T+ LI CK A + M G P ++LI
Sbjct: 302 VEPDSYTYGSLISGMCKGGKLEEASGILEKMKEIGLLPTAVTYNTLI 348
Score = 35.4 bits (80), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 32/147 (21%), Positives = 53/147 (36%), Gaps = 35/147 (23%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGD--------------- 45
+IS C+ G EE + + V N+++ YC GD
Sbjct: 312 LISGMCKGGKLEEASGILEKMKEIGLLPTAVTYNTLIDGYCNKGDLVKAFGYRDEMVRRA 371
Query: 46 --------------------MESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYMLAY 85
M+ +++ + + I PD T++ILI +C+ A+
Sbjct: 372 ILPTVSTYNLLIHALFLEGKMDEADGMIKDMGDSGIVPDSITYNILINGYCRCGNAKKAF 431
Query: 86 RTMVDMHRKGHQPEEELCSSLIFHLGK 112
+M KG QP +SLI+ L K
Sbjct: 432 NLHDEMISKGIQPTLVTYTSLIYVLSK 458
>gi|147778634|emb|CAN76112.1| hypothetical protein VITISV_005527 [Vitis vinifera]
Length = 1494
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/122 (30%), Positives = 58/122 (47%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
MIS + R G E +L D E+K D V NS+L A+ R G+++ V + + ++
Sbjct: 367 MISVYGRCGMSREAGRLFKDLESKGFLPDAVTYNSLLYAFAREGNVDKVKEICEDMVKMG 426
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
D T++ +I + K + LA++ DM G P+ + LI LGK EA
Sbjct: 427 FGKDEMTYNTIIHMYGKRGQHDLAFQLYSDMKLSGRSPDAVTYTVLIDSLGKANMIKEAA 486
Query: 121 SV 122
V
Sbjct: 487 EV 488
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 31/126 (24%), Positives = 59/126 (46%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
MI + + + + + E K D+ + NS+L Y GD + V + + E
Sbjct: 925 MIGLLAKGKRVRDVEAMVSEMEVAXFKPDLSIWNSVLKLYTGIGDFKKTGQVYQLIQEAG 984
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ PD +T++ LI +C+++ M +M R G +P+ + SLI GK++ +A
Sbjct: 985 LKPDEDTYNTLILMYCRDRRPEEGLSLMHEMRRVGLEPKLDTYKSLISAFGKLQMVEQAE 1044
Query: 121 SVYNML 126
++ L
Sbjct: 1045 ELFEGL 1050
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 37/154 (24%), Positives = 66/154 (42%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+ISA R EE ++ D A + D+ N+M+ Y R G + + L+
Sbjct: 332 LISACSRESNLEEAVKVYNDMVAHRCQPDLWTYNAMISVYGRCGMSREAGRLFKDLESKG 391
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
PD T++ L+ F +E DM + G +E +++I GK H A
Sbjct: 392 FLPDAVTYNSLLYAFAREGNVDKVKEICEDMVKMGFGKDEMTYNTIIHMYGKRGQHDLAF 451
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLKDA 154
+Y+ ++ S RS + ++ L ++K+A
Sbjct: 452 QLYSDMKLSGRSPDAVTYTVLIDSLGKANMIKEA 485
Score = 39.3 bits (90), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 44/97 (45%), Gaps = 2/97 (2%)
Query: 30 VVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYM--LAYRT 87
V + N+M+ Y RTG V ++ + PD +F+ LI K + LA
Sbjct: 254 VQVYNAMMGVYARTGRFTKVQELLDLMRSRGCEPDLVSFNTLINARLKSGTMVTNLAIEL 313
Query: 88 MVDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVYN 124
+ ++ R G QP+ ++LI + EA+ VYN
Sbjct: 314 LNEVRRSGIQPDIITYNTLISACSRESNLEEAVKVYN 350
Score = 35.8 bits (81), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 27/121 (22%), Positives = 57/121 (47%), Gaps = 2/121 (1%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMES--VMHVMRKLDE 58
M+ + R+G F + ++L ++ + D+V N+++ A ++G M + + ++ ++
Sbjct: 260 MMGVYARTGRFTKVQELLDLMRSRGCEPDLVSFNTLINARLKSGTMVTNLAIELLNEVRR 319
Query: 59 LAISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSE 118
I PD T++ LI +E A + DM QP+ +++I G+ E
Sbjct: 320 SGIQPDIITYNTLISACSRESNLEEAVKVYNDMVAHRCQPDLWTYNAMISVYGRCGMSRE 379
Query: 119 A 119
A
Sbjct: 380 A 380
>gi|359479250|ref|XP_002275790.2| PREDICTED: pentatricopeptide repeat-containing protein
At5g01110-like [Vitis vinifera]
Length = 746
Score = 58.2 bits (139), Expect = 1e-06, Method: Composition-based stats.
Identities = 31/99 (31%), Positives = 49/99 (49%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
MI+A C++ E TK D E K DVV N+++ AYCR G +E +M +
Sbjct: 260 MINALCKNQKIENTKSFLSDMEEKGVFPDVVTYNTLINAYCRQGLLEEAFELMDSMSGKG 319
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPE 99
+ P T++ +I CK Y+ A + +M + G P+
Sbjct: 320 LKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPD 358
Score = 55.5 bits (132), Expect = 7e-06, Method: Composition-based stats.
Identities = 36/127 (28%), Positives = 62/127 (48%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+A+CR G EE +L K K V N+++ C+TG V+ ++ ++
Sbjct: 295 LINAYCRQGLLEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIG 354
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+SPD T++IL+ C+ M A R +M +G P+ S+LI L K +AL
Sbjct: 355 MSPDTATYNILLVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQAL 414
Query: 121 SVYNMLR 127
+ ++
Sbjct: 415 KYFRDMK 421
Score = 44.7 bits (104), Expect = 0.014, Method: Composition-based stats.
Identities = 28/126 (22%), Positives = 58/126 (46%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I ++GC ++ + D + D V+ ++ +CR G M + V ++ E
Sbjct: 400 LIGLLSKNGCLDQALKYFRDMKNAGLAPDNVIYTILIGGFCRNGVMSEALKVRDEMLEQG 459
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
D T++ ++ CKEKM A +M +G P+ ++LI K ++A+
Sbjct: 460 CVLDVVTYNTILNGLCKEKMLSEADELFTEMTERGVFPDFYTFTTLINGYSKDGNMNKAV 519
Query: 121 SVYNML 126
+++ M+
Sbjct: 520 TLFEMM 525
Score = 43.1 bits (100), Expect = 0.034, Method: Composition-based stats.
Identities = 20/72 (27%), Positives = 38/72 (52%)
Query: 27 KYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYMLAYR 86
+ +V LN M+ A C+ +E+ + ++E + PD T++ LI +C++ + A+
Sbjct: 251 QVNVYTLNIMINALCKNQKIENTKSFLSDMEEKGVFPDVVTYNTLINAYCRQGLLEEAFE 310
Query: 87 TMVDMHRKGHQP 98
M M KG +P
Sbjct: 311 LMDSMSGKGLKP 322
Score = 42.7 bits (99), Expect = 0.046, Method: Composition-based stats.
Identities = 25/99 (25%), Positives = 45/99 (45%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ +C GC E +L + K + ++ N+++ YCR G+ + +
Sbjct: 575 LINGYCNMGCVSEAFRLWDEMVEKGFEATIITCNTIVKGYCRAGNAVKADEFLSNMLLKG 634
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPE 99
I PD T++ LI F KE+ A+ + M G P+
Sbjct: 635 IVPDGITYNTLINGFIKEENMDRAFALVNKMENSGLLPD 673
Score = 40.4 bits (93), Expect = 0.24, Method: Composition-based stats.
Identities = 30/127 (23%), Positives = 55/127 (43%), Gaps = 20/127 (15%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I FCR+G E ++ + + DVV N++L C+ + + ++ E
Sbjct: 435 LIGGFCRNGVMSEALKVRDEMLEQGCVLDVVTYNTILNGLCKEKMLSEADELFTEMTERG 494
Query: 61 ISPDYNTFHILIKYFCKE------------------KMYMLAYRTMVDMHRKGHQPEE-- 100
+ PD+ TF LI + K+ K ++ Y T++D KG + E+
Sbjct: 495 VFPDFYTFTTLINGYSKDGNMNKAVTLFEMMIQRNLKPDVVTYNTLIDGFCKGSEMEKVN 554
Query: 101 ELCSSLI 107
EL + +I
Sbjct: 555 ELWNDMI 561
Score = 40.0 bits (92), Expect = 0.32, Method: Composition-based stats.
Identities = 21/81 (25%), Positives = 41/81 (50%)
Query: 27 KYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYMLAYR 86
K DVV N+++ +C+ +ME V + + I P++ ++ ILI +C A+R
Sbjct: 531 KPDVVTYNTLIDGFCKGSEMEKVNELWNDMISRRIYPNHISYGILINGYCNMGCVSEAFR 590
Query: 87 TMVDMHRKGHQPEEELCSSLI 107
+M KG + C++++
Sbjct: 591 LWDEMVEKGFEATIITCNTIV 611
Score = 39.7 bits (91), Expect = 0.42, Method: Composition-based stats.
Identities = 20/74 (27%), Positives = 38/74 (51%)
Query: 29 DVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYMLAYRTM 88
DV+ N +L + R G M+ +M K+ E ++PD +T+ LI + A+R
Sbjct: 673 DVITYNVILNGFSRQGRMQEAELIMLKMIERGVNPDRSTYTSLINGHVTQNNLKEAFRVH 732
Query: 89 VDMHRKGHQPEEEL 102
+M ++G P+++
Sbjct: 733 DEMLQRGFVPDDKF 746
Score = 39.3 bits (90), Expect = 0.56, Method: Composition-based stats.
Identities = 34/154 (22%), Positives = 60/154 (38%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ C++G + K + + D N +L CR +M + ++
Sbjct: 330 IINGLCKTGKYLRAKGVLDEMLKIGMSPDTATYNILLVECCRNDNMMDAERIFDEMPSQG 389
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ PD +F LI K A + DM G P+ + + LI + SEAL
Sbjct: 390 VVPDLVSFSALIGLLSKNGCLDQALKYFRDMKNAGLAPDNVIYTILIGGFCRNGVMSEAL 449
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLKDA 154
V + + + + IL+ L K+L +A
Sbjct: 450 KVRDEMLEQGCVLDVVTYNTILNGLCKEKMLSEA 483
>gi|296083846|emb|CBI24234.3| unnamed protein product [Vitis vinifera]
Length = 589
Score = 58.2 bits (139), Expect = 1e-06, Method: Composition-based stats.
Identities = 31/99 (31%), Positives = 49/99 (49%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
MI+A C++ E TK D E K DVV N+++ AYCR G +E +M +
Sbjct: 103 MINALCKNQKIENTKSFLSDMEEKGVFPDVVTYNTLINAYCRQGLLEEAFELMDSMSGKG 162
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPE 99
+ P T++ +I CK Y+ A + +M + G P+
Sbjct: 163 LKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPD 201
Score = 55.5 bits (132), Expect = 8e-06, Method: Composition-based stats.
Identities = 36/127 (28%), Positives = 62/127 (48%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+A+CR G EE +L K K V N+++ C+TG V+ ++ ++
Sbjct: 138 LINAYCRQGLLEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIG 197
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+SPD T++IL+ C+ M A R +M +G P+ S+LI L K +AL
Sbjct: 198 MSPDTATYNILLVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQAL 257
Query: 121 SVYNMLR 127
+ ++
Sbjct: 258 KYFRDMK 264
Score = 44.7 bits (104), Expect = 0.015, Method: Composition-based stats.
Identities = 28/126 (22%), Positives = 58/126 (46%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I ++GC ++ + D + D V+ ++ +CR G M + V ++ E
Sbjct: 243 LIGLLSKNGCLDQALKYFRDMKNAGLAPDNVIYTILIGGFCRNGVMSEALKVRDEMLEQG 302
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
D T++ ++ CKEKM A +M +G P+ ++LI K ++A+
Sbjct: 303 CVLDVVTYNTILNGLCKEKMLSEADELFTEMTERGVFPDFYTFTTLINGYSKDGNMNKAV 362
Query: 121 SVYNML 126
+++ M+
Sbjct: 363 TLFEMM 368
Score = 43.1 bits (100), Expect = 0.035, Method: Composition-based stats.
Identities = 20/72 (27%), Positives = 38/72 (52%)
Query: 27 KYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYMLAYR 86
+ +V LN M+ A C+ +E+ + ++E + PD T++ LI +C++ + A+
Sbjct: 94 QVNVYTLNIMINALCKNQKIENTKSFLSDMEEKGVFPDVVTYNTLINAYCRQGLLEEAFE 153
Query: 87 TMVDMHRKGHQP 98
M M KG +P
Sbjct: 154 LMDSMSGKGLKP 165
Score = 42.7 bits (99), Expect = 0.048, Method: Composition-based stats.
Identities = 25/99 (25%), Positives = 45/99 (45%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ +C GC E +L + K + ++ N+++ YCR G+ + +
Sbjct: 418 LINGYCNMGCVSEAFRLWDEMVEKGFEATIITCNTIVKGYCRAGNAVKADEFLSNMLLKG 477
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPE 99
I PD T++ LI F KE+ A+ + M G P+
Sbjct: 478 IVPDGITYNTLINGFIKEENMDRAFALVNKMENSGLLPD 516
Score = 40.4 bits (93), Expect = 0.26, Method: Composition-based stats.
Identities = 30/127 (23%), Positives = 55/127 (43%), Gaps = 20/127 (15%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I FCR+G E ++ + + DVV N++L C+ + + ++ E
Sbjct: 278 LIGGFCRNGVMSEALKVRDEMLEQGCVLDVVTYNTILNGLCKEKMLSEADELFTEMTERG 337
Query: 61 ISPDYNTFHILIKYFCKE------------------KMYMLAYRTMVDMHRKGHQPEE-- 100
+ PD+ TF LI + K+ K ++ Y T++D KG + E+
Sbjct: 338 VFPDFYTFTTLINGYSKDGNMNKAVTLFEMMIQRNLKPDVVTYNTLIDGFCKGSEMEKVN 397
Query: 101 ELCSSLI 107
EL + +I
Sbjct: 398 ELWNDMI 404
Score = 40.0 bits (92), Expect = 0.34, Method: Composition-based stats.
Identities = 21/81 (25%), Positives = 41/81 (50%)
Query: 27 KYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYMLAYR 86
K DVV N+++ +C+ +ME V + + I P++ ++ ILI +C A+R
Sbjct: 374 KPDVVTYNTLIDGFCKGSEMEKVNELWNDMISRRIYPNHISYGILINGYCNMGCVSEAFR 433
Query: 87 TMVDMHRKGHQPEEELCSSLI 107
+M KG + C++++
Sbjct: 434 LWDEMVEKGFEATIITCNTIV 454
Score = 39.7 bits (91), Expect = 0.44, Method: Composition-based stats.
Identities = 20/74 (27%), Positives = 38/74 (51%)
Query: 29 DVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYMLAYRTM 88
DV+ N +L + R G M+ +M K+ E ++PD +T+ LI + A+R
Sbjct: 516 DVITYNVILNGFSRQGRMQEAELIMLKMIERGVNPDRSTYTSLINGHVTQNNLKEAFRVH 575
Query: 89 VDMHRKGHQPEEEL 102
+M ++G P+++
Sbjct: 576 DEMLQRGFVPDDKF 589
Score = 39.3 bits (90), Expect = 0.58, Method: Composition-based stats.
Identities = 34/154 (22%), Positives = 60/154 (38%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ C++G + K + + D N +L CR +M + ++
Sbjct: 173 IINGLCKTGKYLRAKGVLDEMLKIGMSPDTATYNILLVECCRNDNMMDAERIFDEMPSQG 232
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ PD +F LI K A + DM G P+ + + LI + SEAL
Sbjct: 233 VVPDLVSFSALIGLLSKNGCLDQALKYFRDMKNAGLAPDNVIYTILIGGFCRNGVMSEAL 292
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLKDA 154
V + + + + IL+ L K+L +A
Sbjct: 293 KVRDEMLEQGCVLDVVTYNTILNGLCKEKMLSEA 326
>gi|255575351|ref|XP_002528578.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223531974|gb|EEF33786.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 817
Score = 57.8 bits (138), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/113 (27%), Positives = 54/113 (47%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+++ C+ G E+ +++ F D V+ N+ + YCR GDM + + +++
Sbjct: 357 LLNGLCKQGKVEKAEEILKKFTENGLVADEVIYNTFVNGYCRIGDMNKAILTIERMESFG 416
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKM 113
+ P+ TF+ LI FC K A + M KG P E ++LI GK+
Sbjct: 417 LRPNSITFNSLIDKFCDMKEMDKAEEWVKKMAEKGVTPSVETYNTLIDGYGKL 469
Score = 42.0 bits (97), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 22/94 (23%), Positives = 40/94 (42%), Gaps = 2/94 (2%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C+ G E + + DV+ NS++ Y G++ + + + L
Sbjct: 567 LIDGLCKKGKLTEAEDFLTQITSSGHSPDVITYNSLISGYANAGNVSKCLGLYETMKNLG 626
Query: 61 ISPDYNTFHILIKYFCKEKMYMLA--YRTMVDMH 92
I P T+H LI KE + ++ Y M+ M+
Sbjct: 627 IKPTVRTYHPLISGCSKEGIELVEKLYNEMLQMN 660
Score = 40.4 bits (93), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 16/70 (22%), Positives = 38/70 (54%)
Query: 30 VVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYMLAYRTMV 89
+V N+++ YC+ G++++ + ++ E +++P+ TF+ L+ CK + A +
Sbjct: 246 IVTYNTLIDGYCKVGELDAAFKMRERMKEKSVAPNIITFNSLLSGLCKMRKMKEARSLLK 305
Query: 90 DMHRKGHQPE 99
+M G P+
Sbjct: 306 EMEVNGFMPD 315
Score = 37.0 bits (84), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 31/148 (20%), Positives = 61/148 (41%), Gaps = 4/148 (2%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ C+ G E + + D + + + N ++ C G ++ + ++
Sbjct: 497 LINCLCKDGKILEAEIVLRDMICRGVLPNAQVYNMLIDGSCMVGKVKDALRFFDEMMRSE 556
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
ISP T+++LI CK+ A + + GH P+ +SLI S+ L
Sbjct: 557 ISPTLVTYNVLIDGLCKKGKLTEAEDFLTQITSSGHSPDVITYNSLISGYANAGNVSKCL 616
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISG 148
+Y + +++ + H LISG
Sbjct: 617 GLYETM----KNLGIKPTVRTYHPLISG 640
Score = 35.8 bits (81), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 19/82 (23%), Positives = 38/82 (46%)
Query: 29 DVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYMLAYRTM 88
D + NS++ + R G + ++ ++ + ++P +T+ IL+K C K + AY
Sbjct: 699 DKMTYNSLILGHFREGKLSNIKDLVNNMKAKELAPKADTYDILVKGHCDLKDFSGAYVWY 758
Query: 89 VDMHRKGHQPEEELCSSLIFHL 110
+M P +C+ L L
Sbjct: 759 REMVENNFLPNASICNELTAGL 780
>gi|297737369|emb|CBI26570.3| unnamed protein product [Vitis vinifera]
Length = 1042
Score = 57.8 bits (138), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/122 (30%), Positives = 58/122 (47%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
MIS + R G E +L D E+K D V NS+L A+ R G+++ V + + ++
Sbjct: 310 MISVYGRCGMSREAGRLFKDLESKGFLPDAVTYNSLLYAFAREGNVDKVKEICEDMVKMG 369
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
D T++ +I + K + LA++ DM G P+ + LI LGK EA
Sbjct: 370 FGKDEMTYNTIIHMYGKRGQHDLAFQLYSDMKLSGRSPDAVTYTVLIDSLGKANMIKEAA 429
Query: 121 SV 122
V
Sbjct: 430 EV 431
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 37/154 (24%), Positives = 66/154 (42%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+ISA R EE ++ D A + D+ N+M+ Y R G + + L+
Sbjct: 275 LISACSRESNLEEAVKVYNDMVAHRCQPDLWTYNAMISVYGRCGMSREAGRLFKDLESKG 334
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
PD T++ L+ F +E DM + G +E +++I GK H A
Sbjct: 335 FLPDAVTYNSLLYAFAREGNVDKVKEICEDMVKMGFGKDEMTYNTIIHMYGKRGQHDLAF 394
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLKDA 154
+Y+ ++ S RS + ++ L ++K+A
Sbjct: 395 QLYSDMKLSGRSPDAVTYTVLIDSLGKANMIKEA 428
Score = 39.3 bits (90), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 44/97 (45%), Gaps = 2/97 (2%)
Query: 30 VVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYM--LAYRT 87
V + N+M+ Y RTG V ++ + PD +F+ LI K + LA
Sbjct: 197 VQVYNAMMGVYARTGRFTKVQELLDLMRSRGCEPDLVSFNTLINARLKSGTMVTNLAIEL 256
Query: 88 MVDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVYN 124
+ ++ R G QP+ ++LI + EA+ VYN
Sbjct: 257 LNEVRRSGIQPDIITYNTLISACSRESNLEEAVKVYN 293
Score = 35.8 bits (81), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 27/121 (22%), Positives = 57/121 (47%), Gaps = 2/121 (1%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMES--VMHVMRKLDE 58
M+ + R+G F + ++L ++ + D+V N+++ A ++G M + + ++ ++
Sbjct: 203 MMGVYARTGRFTKVQELLDLMRSRGCEPDLVSFNTLINARLKSGTMVTNLAIELLNEVRR 262
Query: 59 LAISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSE 118
I PD T++ LI +E A + DM QP+ +++I G+ E
Sbjct: 263 SGIQPDIITYNTLISACSRESNLEEAVKVYNDMVAHRCQPDLWTYNAMISVYGRCGMSRE 322
Query: 119 A 119
A
Sbjct: 323 A 323
>gi|392578037|gb|EIW71165.1| hypothetical protein TREMEDRAFT_28279 [Tremella mesenterica DSM
1558]
Length = 713
Score = 57.8 bits (138), Expect = 1e-06, Method: Composition-based stats.
Identities = 31/96 (32%), Positives = 52/96 (54%), Gaps = 3/96 (3%)
Query: 20 DFEAKYD---KYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFC 76
D AK+D K D++ +N++L + R D++S+ H+ EL++ PD T+ L++
Sbjct: 444 DQAAKHDSAIKCDIITINTVLRHHARMADIDSMTHLFDLASELSLKPDIVTYTTLMQGLL 503
Query: 77 KEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGK 112
+ LA + MH +G +P E +CS LI L K
Sbjct: 504 RAGRVDLASAALTAMHNQGVEPNERMCSLLIADLSK 539
>gi|79317869|ref|NP_001031033.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75178969|sp|Q9LPX2.1|PPR39_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g12775, mitochondrial; Flags: Precursor
gi|8698724|gb|AAF78482.1|AC012187_2 Contains similarity to an unknown protein F16M19.7 gi|6598837 from
Arabidopsis thaliana BAC F16M19 gb|AC010795 and contains
multiple PPR PF|01535 repeats. EST gb|AI999079 comes
from this gene [Arabidopsis thaliana]
gi|332190806|gb|AEE28927.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 644
Score = 57.8 bits (138), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/150 (25%), Positives = 70/150 (46%), Gaps = 8/150 (5%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C+ G + L + E K K D++ N+++ +C G + ++R + +
Sbjct: 269 IIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRK 328
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
ISP+ TF +LI F KE A + + +M ++G P +SLI K EA+
Sbjct: 329 ISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAI 388
Query: 121 SVYNMLRYSKRSMCKALHEKIL--HILISG 148
+ +++ + K I+ +ILI+G
Sbjct: 389 QMVDLM------ISKGCDPDIMTFNILING 412
Score = 43.9 bits (102), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 29/155 (18%), Positives = 70/155 (45%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I FC+ EE Q+ +K D++ N ++ YC+ ++ + + R++
Sbjct: 374 LIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRG 433
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ + T++ L++ FC+ +A + +M + +P+ L+ L +AL
Sbjct: 434 VIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKAL 493
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLKDAY 155
++ + SK + ++ I+H + + + DA+
Sbjct: 494 EIFGKIEKSKMELDIGIYMIIIHGMCNASKVDDAW 528
Score = 40.0 bits (92), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 19/77 (24%), Positives = 37/77 (48%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I +F + G E QL + + + + NS++ +C+ +E + ++ +
Sbjct: 339 LIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKG 398
Query: 61 ISPDYNTFHILIKYFCK 77
PD TF+ILI +CK
Sbjct: 399 CDPDIMTFNILINGYCK 415
Score = 38.1 bits (87), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 25/119 (21%), Positives = 54/119 (45%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ FC+SG E K+L + ++ + D+V +L C G++E + + K+++
Sbjct: 444 LVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEKSK 503
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEA 119
+ D + I+I C A+ + KG + + + +I L + + S+A
Sbjct: 504 MELDIGIYMIIIHGMCNASKVDDAWDLFCSLPLKGVKLDARAYNIMISELCRKDSLSKA 562
Score = 37.4 bits (85), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 29/130 (22%), Positives = 65/130 (50%), Gaps = 2/130 (1%)
Query: 30 VVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYMLAYRTMV 89
V+ N + A +T E V+ + ++++ I+ T I+I FC+ + A+ TM
Sbjct: 88 VIDFNRLFSAIAKTKQYELVLALCKQMESKGIAHSIYTLSIMINCFCRCRKLSYAFSTMG 147
Query: 90 DMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVYN-MLRYSKRSMCKALHEKILHILISG 148
+ + G++P+ + ++L+ L SEAL + + M+ + L+ + + ++G
Sbjct: 148 KIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEMGHKPTLITLNTLVNGLCLNG 207
Query: 149 KLLKDAYIVV 158
K + DA +++
Sbjct: 208 K-VSDAVVLI 216
>gi|356529689|ref|XP_003533421.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Glycine max]
Length = 892
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/127 (26%), Positives = 62/127 (48%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I ++C+ G E+ + G E+K +V N ++C +CR M+ M ++ K+ E
Sbjct: 366 LIGSYCKRGMMEDAVGVLGLMESKKVCPNVRTYNELICGFCRGKSMDRAMALLNKMVESK 425
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+SPD T++ LI C+ + A R M R G P++ ++ + L +M EA
Sbjct: 426 LSPDVVTYNTLIHGLCEVGVVDSASRLFRLMIRDGFSPDQWTFNAFMVCLCRMGRVGEAH 485
Query: 121 SVYNMLR 127
+ L+
Sbjct: 486 QILESLK 492
Score = 42.4 bits (98), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 21/79 (26%), Positives = 41/79 (51%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C+ G +E ++ + K VV N+++ +YC+ G ME + V+ ++
Sbjct: 331 LIDYLCKEGRMDEALKMLNEMVEKGVAPSVVPFNALIGSYCKRGMMEDAVGVLGLMESKK 390
Query: 61 ISPDYNTFHILIKYFCKEK 79
+ P+ T++ LI FC+ K
Sbjct: 391 VCPNVRTYNELICGFCRGK 409
Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 32/145 (22%), Positives = 63/145 (43%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ A C SG E L G+ + + +V ++ C+ G M+ + ++ ++ E
Sbjct: 296 LVCALCESGRELEALSLFGEMRERGCEPNVYTYTVLIDYLCKEGRMDEALKMLNEMVEKG 355
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
++P F+ LI +CK M A + M K P + LI + ++ A+
Sbjct: 356 VAPSVVPFNALIGSYCKRGMMEDAVGVLGLMESKKVCPNVRTYNELICGFCRGKSMDRAM 415
Query: 121 SVYNMLRYSKRSMCKALHEKILHIL 145
++ N + SK S + ++H L
Sbjct: 416 ALLNKMVESKLSPDVVTYNTLIHGL 440
Score = 38.5 bits (88), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 39/78 (50%)
Query: 2 ISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAI 61
I A+C G EE +++ + + D + N ++ AY G ++S V+R++
Sbjct: 612 IKAYCSQGRLEEAEEMVIKIKNEGVLLDSFIYNLLINAYGCMGLLDSAFGVLRRMFGTGC 671
Query: 62 SPDYNTFHILIKYFCKEK 79
P Y T+ IL+K+ EK
Sbjct: 672 EPSYLTYSILMKHLVIEK 689
Score = 35.4 bits (80), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 24/107 (22%), Positives = 43/107 (40%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I FCR + L DVV N+++ C G ++S + R +
Sbjct: 401 LICGFCRGKSMDRAMALLNKMVESKLSPDVVTYNTLIHGLCEVGVVDSASRLFRLMIRDG 460
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLI 107
SPD TF+ + C+ A++ + + K + E ++LI
Sbjct: 461 FSPDQWTFNAFMVCLCRMGRVGEAHQILESLKEKHVKANEHAYTALI 507
>gi|297848852|ref|XP_002892307.1| UDP-glucoronosyl/UDP-glucosyl transferase family protein [Arabidopsis
lyrata subsp. lyrata]
gi|297338149|gb|EFH68566.1| UDP-glucoronosyl/UDP-glucosyl transferase family protein [Arabidopsis
lyrata subsp. lyrata]
Length = 1164
Score = 57.8 bits (138), Expect = 2e-06, Method: Composition-based stats.
Identities = 29/107 (27%), Positives = 54/107 (50%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+++ C+SG EE +L G+FEA D V +++ AYC++G+M+ ++ ++
Sbjct: 920 IVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILTEMLGKG 979
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLI 107
+ P TF++L+ FC M + + M KG P + L+
Sbjct: 980 LQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNCLV 1026
Score = 44.3 bits (103), Expect = 0.015, Method: Composition-based stats.
Identities = 30/122 (24%), Positives = 55/122 (45%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+IS FC+ G E +L + + + D++ ++ YC+ G ++ V + +
Sbjct: 815 IISGFCQIGDMVEAGKLFHEMLCRGLEPDIITFTELMNGYCKAGHIKDAFRVHNHMIQAG 874
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
SP+ T+ LI CKE A + +M + G QP +S++ L K EA+
Sbjct: 875 CSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAV 934
Query: 121 SV 122
+
Sbjct: 935 KL 936
Score = 42.4 bits (98), Expect = 0.066, Method: Composition-based stats.
Identities = 27/127 (21%), Positives = 54/127 (42%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+++ FC G E+ ++L AK + N ++ YC ++++ + + +
Sbjct: 990 LMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNCLVKQYCIRNNLKAATAIYKDMCSRG 1049
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ PD T+ L+K C + A+ +M KG S LI K + EA
Sbjct: 1050 VEPDGKTYENLVKGHCNARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFFKRKKFVEAR 1109
Query: 121 SVYNMLR 127
+++ +R
Sbjct: 1110 EIFDQMR 1116
Score = 39.7 bits (91), Expect = 0.40, Method: Composition-based stats.
Identities = 25/112 (22%), Positives = 48/112 (42%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ FC+ G + + ++ DV+ +++ +C+ GDM + ++
Sbjct: 780 LVDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMLCRG 839
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGK 112
+ PD TF L+ +CK A+R M + G P ++LI L K
Sbjct: 840 LEPDIITFTELMNGYCKAGHIKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCK 891
Score = 39.7 bits (91), Expect = 0.43, Method: Composition-based stats.
Identities = 20/98 (20%), Positives = 46/98 (46%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C+ G + +L + + ++ NS++ C++G++E + ++ + +
Sbjct: 885 LIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAG 944
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQP 98
++ D T+ L+ +CK A + +M KG QP
Sbjct: 945 LNADTVTYTTLMDAYCKSGEMDKAQEILTEMLGKGLQP 982
Score = 38.9 bits (89), Expect = 0.76, Method: Composition-based stats.
Identities = 28/121 (23%), Positives = 56/121 (46%), Gaps = 3/121 (2%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C+ G E L E K DV+ ++++ YCR G+++ V ++ K+ +
Sbjct: 675 VIHFVCQLGRINEAHHLLLLMELKGYTPDVISYSTVINGYCRFGELDKVWKLIEKMKQKG 734
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHL---GKMRAHS 117
+ P+ T+ +I C+ A +M +G P+ + ++L+ G +RA S
Sbjct: 735 LKPNSYTYGSIIGLLCRICKLAEAEEAFSEMIGQGILPDTIVYTTLVDGFCKRGDIRAAS 794
Query: 118 E 118
+
Sbjct: 795 K 795
>gi|242073234|ref|XP_002446553.1| hypothetical protein SORBIDRAFT_06g018030 [Sorghum bicolor]
gi|241937736|gb|EES10881.1| hypothetical protein SORBIDRAFT_06g018030 [Sorghum bicolor]
Length = 381
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/124 (25%), Positives = 56/124 (45%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+IS C G + +L + ++ K D+V N++L C E +M K+ +
Sbjct: 127 VISGMCEQGHVDSALELLSNMQSFGCKPDIVTYNTLLKGLCSADQWEDAEELMIKMSQND 186
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
PD TF+ +I + C++ + + A+ M KG P S++I L K +AL
Sbjct: 187 CLPDNVTFNTIISFLCQKGLILQAFEVFKQMPEKGCNPNSTTYSTIIGGLAKAGKMEQAL 246
Query: 121 SVYN 124
+ N
Sbjct: 247 ELLN 250
Score = 38.9 bits (89), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 20/95 (21%), Positives = 43/95 (45%)
Query: 29 DVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYMLAYRTM 88
+VV N+++ C G ++S + ++ + PD T++ L+K C + A M
Sbjct: 120 NVVTYNAVISGMCEQGHVDSALELLSNMQSFGCKPDIVTYNTLLKGLCSADQWEDAEELM 179
Query: 89 VDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVY 123
+ M + P+ +++I L + +A V+
Sbjct: 180 IKMSQNDCLPDNVTFNTIISFLCQKGLILQAFEVF 214
Score = 37.4 bits (85), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 18/84 (21%), Positives = 40/84 (47%)
Query: 29 DVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYMLAYRTM 88
+VV N ++ A CR GD++ ++ L P+ ++ ++K C + ++ A +
Sbjct: 15 NVVTYNVIIDAMCREGDVDQARELLNSLPSRGCKPNTVNYNTVLKGLCSIERWVDAEELL 74
Query: 89 VDMHRKGHQPEEELCSSLIFHLGK 112
+M R+ P E + ++ L +
Sbjct: 75 DEMVRENCPPNEATVNVIVNTLSR 98
>gi|15226583|ref|NP_179165.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75216226|sp|Q9ZQF1.1|PP152_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At2g15630, mitochondrial; Flags: Precursor
gi|4335729|gb|AAD17407.1| putative salt-inducible protein [Arabidopsis thaliana]
gi|330251331|gb|AEC06425.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 627
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/99 (27%), Positives = 55/99 (55%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I CR E +L K K D+V++N+++ +C G+M+ +++++D ++
Sbjct: 438 LIYVLCRKNKTREADELFEKVVGKGMKPDLVMMNTLMDGHCAIGNMDRAFSLLKEMDMMS 497
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPE 99
I+PD T++ L++ C E + A M +M R+G +P+
Sbjct: 498 INPDDVTYNCLMRGLCGEGKFEEARELMGEMKRRGIKPD 536
Score = 48.5 bits (114), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 28/115 (24%), Positives = 55/115 (47%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ C G FEE ++L G+ + + K D + N+++ Y + GD + V ++ L
Sbjct: 508 LMRGLCGEGKFEEARELMGEMKRRGIKPDHISYNTLISGYSKKGDTKHAFMVRDEMLSLG 567
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRA 115
+P T++ L+K K + LA + +M +G P + S+I + + A
Sbjct: 568 FNPTLLTYNALLKGLSKNQEGELAEELLREMKSEGIVPNDSSFCSVIEAMSNLDA 622
Score = 39.3 bits (90), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 17/78 (21%), Positives = 36/78 (46%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
MI+ C+ G ++ K G E K +V N+++ + G +E ++ ++
Sbjct: 231 MINVLCKEGKLKKAKGFLGIMEVFGIKPTIVTYNTLVQGFSLRGRIEGARLIISEMKSKG 290
Query: 61 ISPDYNTFHILIKYFCKE 78
PD T++ ++ + C E
Sbjct: 291 FQPDMQTYNPILSWMCNE 308
>gi|302792250|ref|XP_002977891.1| hypothetical protein SELMODRAFT_107819 [Selaginella moellendorffii]
gi|300154594|gb|EFJ21229.1| hypothetical protein SELMODRAFT_107819 [Selaginella moellendorffii]
Length = 385
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/138 (28%), Positives = 63/138 (45%), Gaps = 14/138 (10%)
Query: 1 MISAFCRSGCFEETKQLAGD-FEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDEL 59
+I C+ G +E L G ++ + V NS++ +CR G M+ M+++ ++ E
Sbjct: 130 LIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDEAMNLLERMAET 189
Query: 60 AISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPE--------EELC-----SSL 106
SPD T+ L+ FCK AY + M RKG P + LC S
Sbjct: 190 GSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPNVVTFTSLMDGLCRENRLSDA 249
Query: 107 IFHLGKMRAHSEALSVYN 124
+ LG+MR S + +VY
Sbjct: 250 VHILGEMRRKSCSPTVYT 267
Score = 43.1 bits (100), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 29/123 (23%), Positives = 54/123 (43%), Gaps = 2/123 (1%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ CR + + G+ K V N++L YCR +E M L+E+
Sbjct: 236 LMDGLCRENRLSDAVHILGEMRRKSCSPTVYTYNTILDGYCRVNQLEEARKFM--LEEMD 293
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
P+ +F+I+I+ CK A + + R+ P+ + +++I L + + EA
Sbjct: 294 CPPNVVSFNIMIRGLCKVNRSSEAMELVEEARRRRCNPDVVMYTTVIDVLCREKKVDEAC 353
Query: 121 SVY 123
VY
Sbjct: 354 RVY 356
>gi|218200855|gb|EEC83282.1| hypothetical protein OsI_28637 [Oryza sativa Indica Group]
Length = 662
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/157 (22%), Positives = 71/157 (45%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
MI C+ EE +L GD + K D+ N++L AYC G ME H++ ++
Sbjct: 280 MIRGCCKDSKMEEAIKLHGDMTRRGFKPDLFTFNTLLHAYCNLGKMEETFHLLDQMKTEG 339
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ PD ++ +I CK K A + ++ +G +P + ++LI G+ S A+
Sbjct: 340 LQPDIVSYGTIIDGHCKAKDIRKAKEYLTELMDRGLKPNVFIYNALIGGYGRNGDISGAI 399
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLKDAYIV 157
++ + + +++ + L+++A +
Sbjct: 400 DAVETMKSNGIQPTNVTYGSLMYWMCHAGLVEEAKTI 436
Score = 43.5 bits (101), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 24/107 (22%), Positives = 51/107 (47%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
MI A C++G + ++ + + VV N ++ A C++G +E + ++++
Sbjct: 17 MIKALCKAGKVDAGFEMLAELWRAGLQPTVVTYNVLMDALCKSGRVEEAFRLKGRMEQGG 76
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLI 107
++P TF ILI + + + + +M + G P E + + LI
Sbjct: 77 MTPSVVTFGILINGLARGERFGEVGIVLQEMEQLGVSPNEVIYNELI 123
Score = 40.0 bits (92), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 25/98 (25%), Positives = 46/98 (46%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ A C+SG EE +L G E VV ++ R V V++++++L
Sbjct: 52 LMDALCKSGRVEEAFRLKGRMEQGGMTPSVVTFGILINGLARGERFGEVGIVLQEMEQLG 111
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQP 98
+SP+ ++ LI + C++ A R +M K +P
Sbjct: 112 VSPNEVIYNELIGWHCRKGHCSQALRLFDEMVLKKMKP 149
Score = 35.8 bits (81), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 24/124 (19%), Positives = 56/124 (45%), Gaps = 1/124 (0%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I CR G + +L + K K V N + A C+ G+ME ++ + +
Sbjct: 122 LIGWHCRKGHCSQALRLFDEMVLKKMKPTAVTYNLIAKALCKEGEMERAERILEDMLSIG 181
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVD-MHRKGHQPEEELCSSLIFHLGKMRAHSEA 119
++ F+ ++ + + + + ++ + M +G +P + L ++ + L K H EA
Sbjct: 182 MTVHCGLFNTVVAWLLQRTRRLESVVSITNEMVTRGMRPNDPLMTACMRELCKGGKHQEA 241
Query: 120 LSVY 123
+ ++
Sbjct: 242 VGIW 245
>gi|297797449|ref|XP_002866609.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297312444|gb|EFH42868.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 724
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 50/110 (45%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ CRSG EE + + + D+V NS++ CR G +E + + RKL
Sbjct: 599 LINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEG 658
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHL 110
I PD T++ L+ + CK A + + G P + S L+ L
Sbjct: 659 IPPDTVTYNTLMSWLCKGGFVYDACLLLDEGIEDGFVPNDRTWSILLQSL 708
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 34/154 (22%), Positives = 67/154 (43%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+AF R G +E ++L + + D + NS++ CR G+++ + K+
Sbjct: 529 LINAFLRRGEIKEARKLVNEMVFQGSLLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDG 588
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ P + +ILI C+ M A +M +G P+ +SLI L + + L
Sbjct: 589 LVPSSISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGL 648
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLKDA 154
+++ L+ + ++ L G + DA
Sbjct: 649 TMFRKLQAEGIPPDTVTYNTLMSWLCKGGFVYDA 682
Score = 43.1 bits (100), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 38/149 (25%), Positives = 61/149 (40%), Gaps = 5/149 (3%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKY-DVVLLNSMLCAYCRTGDMESVMHVMRKLDEL 59
+I F G ++ K + D Y DV NS++ Y + G + + V+R +
Sbjct: 353 LIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKKGLVGLALEVLRDMRNK 412
Query: 60 AISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEA 119
P+ ++ IL+ FCK AY + +M G +P + LI K EA
Sbjct: 413 GCKPNVYSYTILVDGFCKLGKIDEAYNLLNEMSADGLKPNTVGFNCLISAFCKEHRIPEA 472
Query: 120 LSVYNMLRYSKRSMCKALHEKILHILISG 148
+ ++ R R CK + LISG
Sbjct: 473 VEIF---REMPRKGCKP-DVYTFNSLISG 497
Score = 42.0 bits (97), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 33/163 (20%), Positives = 68/163 (41%), Gaps = 20/163 (12%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ FC+ G +E L + A K + V N ++ A+C+ + + + R++
Sbjct: 424 LVDGFCKLGKIDEAYNLLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKG 483
Query: 61 ISPDYNTFHILIKYFC-----KEKMYML-------------AYRTMVDMH-RKGHQPE-E 100
PD TF+ LI C K +++L Y T+++ R+G E
Sbjct: 484 CKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEAR 543
Query: 101 ELCSSLIFHLGKMRAHSEALSVYNMLRYSKRSMCKALHEKILH 143
+L + ++F + + + + R + ++L EK+L
Sbjct: 544 KLVNEMVFQGSLLDEITYNSLIKGLCRAGEVDKARSLFEKMLR 586
Score = 40.4 bits (93), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 26/110 (23%), Positives = 50/110 (45%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I + + G ++ D K K +V ++ +C+ G ++ +++ ++
Sbjct: 389 LIYGYWKKGLVGLALEVLRDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNLLNEMSADG 448
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHL 110
+ P+ F+ LI FCKE A +M RKG +P+ +SLI L
Sbjct: 449 LKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGL 498
>gi|357499975|ref|XP_003620276.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355495291|gb|AES76494.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 590
Score = 57.0 bits (136), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/126 (27%), Positives = 61/126 (48%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+++AFC+ G +E K + + K + V NS++ YC ++ + + +
Sbjct: 301 LVNAFCKDGKMKEGKTVFDMMMKQGIKPNFVTYNSLMDGYCLVKEVNKAKSIFNTMAQGG 360
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
++PD ++ I+I FCK K + A +MHRK P+ SSLI L K S AL
Sbjct: 361 VNPDIQSYSIMINGFCKIKKFDEAMNLFKEMHRKNIIPDVVTYSSLIDGLSKSGRISYAL 420
Query: 121 SVYNML 126
+ + +
Sbjct: 421 QLVDQM 426
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 32/127 (25%), Positives = 64/127 (50%), Gaps = 2/127 (1%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I + C+ E L + +K DVV ++++ +C G ++ + + K+
Sbjct: 231 IIDSMCKVKLVNEAFDLFSEMVSKGISPDVVTYSALISGFCILGKLKDAIDLFNKMILEN 290
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVD-MHRKGHQPEEELCSSLIFHLGKMRAHSEA 119
I PD TF+IL+ FCK+ M +T+ D M ++G +P +SL+ ++ ++A
Sbjct: 291 IKPDVYTFNILVNAFCKDGK-MKEGKTVFDMMMKQGIKPNFVTYNSLMDGYCLVKEVNKA 349
Query: 120 LSVYNML 126
S++N +
Sbjct: 350 KSIFNTM 356
Score = 44.3 bits (103), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 30/123 (24%), Positives = 57/123 (46%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+IS FC G ++ L + K DV N ++ A+C+ G M+ V + +
Sbjct: 266 LISGFCILGKLKDAIDLFNKMILENIKPDVYTFNILVNAFCKDGKMKEGKTVFDMMMKQG 325
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
I P++ T++ L+ +C K A M + G P+ + S +I K++ EA+
Sbjct: 326 IKPNFVTYNSLMDGYCLVKEVNKAKSIFNTMAQGGVNPDIQSYSIMINGFCKIKKFDEAM 385
Query: 121 SVY 123
+++
Sbjct: 386 NLF 388
Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 25/107 (23%), Positives = 49/107 (45%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
MI+ FC+ F+E L + K DVV +S++ ++G + + ++ ++ +
Sbjct: 371 MINGFCKIKKFDEAMNLFKEMHRKNIIPDVVTYSSLIDGLSKSGRISYALQLVDQMHDRG 430
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLI 107
+ P+ T++ ++ CK A + KG QP+ S LI
Sbjct: 431 VPPNICTYNSILDALCKTHQVDKAIALLTKFKDKGFQPDISTYSILI 477
Score = 41.2 bits (95), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 24/97 (24%), Positives = 43/97 (44%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I +SG QL + ++ NS+L A C+T ++ + ++ K +
Sbjct: 406 LIDGLSKSGRISYALQLVDQMHDRGVPPNICTYNSILDALCKTHQVDKAIALLTKFKDKG 465
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQ 97
PD +T+ ILIK C+ A + D+ KG+
Sbjct: 466 FQPDISTYSILIKGLCQSGKLEDARKVFEDLLVKGYN 502
Score = 40.4 bits (93), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 22/100 (22%), Positives = 52/100 (52%), Gaps = 6/100 (6%)
Query: 28 YDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYMLAYRT 87
+D + +++ C+ G+ + + +++++D + P+ ++ +I CK K+ A+
Sbjct: 188 FDQISYGTLIHGLCKVGETRAALDLLQRVDGNLVQPNVVMYNTIIDSMCKVKLVNEAFDL 247
Query: 88 MVDMHRKGHQPEEELCSSLIFH---LGKMRAHSEALSVYN 124
+M KG P+ S+LI LGK++ +A+ ++N
Sbjct: 248 FSEMVSKGISPDVVTYSALISGFCILGKLK---DAIDLFN 284
Score = 37.7 bits (86), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 22/95 (23%), Positives = 44/95 (46%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C+SG E+ +++ D K DV M+ +C G + ++ K+++
Sbjct: 476 LIKGLCQSGKLEDARKVFEDLLVKGYNLDVYAYTIMIQGFCVEGLFNEALALLSKMEDNG 535
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKG 95
PD T+ I+I K+ +A + + +M +G
Sbjct: 536 CIPDAKTYEIIILSLFKKDENDMAEKLLREMIARG 570
>gi|346703131|emb|CBX25230.1| hypothetical_protein [Oryza brachyantha]
Length = 746
Score = 57.0 bits (136), Expect = 2e-06, Method: Composition-based stats.
Identities = 33/122 (27%), Positives = 59/122 (48%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+++ C++G EE K + + D+ N+++ A C +E + + R++
Sbjct: 331 VVNCLCKNGQLEEAKGILNQMVERGCLPDITTFNTLIVALCSGNRLEEALDLARQVTLKG 390
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+SPD TF+ILI CK LA R +M G P+E ++LI +L + +AL
Sbjct: 391 LSPDVYTFNILINALCKVGDPQLALRLFEEMKSSGCTPDEVTYNTLIDNLCSLGKLGKAL 450
Query: 121 SV 122
+
Sbjct: 451 DL 452
Score = 41.2 bits (95), Expect = 0.16, Method: Composition-based stats.
Identities = 25/94 (26%), Positives = 44/94 (46%)
Query: 27 KYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYMLAYR 86
K DVV N+++ A CR + + + ++ ++ ++PD TF L++ F +E A R
Sbjct: 182 KPDVVTFNTLMKALCRAHQVRTAVLMLEEMSSSGVAPDETTFTTLMQGFVEEGSIKAALR 241
Query: 87 TMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
M G P + + LI K+ +AL
Sbjct: 242 VKARMLEMGCSPTKVTVNVLINGYCKLGRVEDAL 275
Score = 40.4 bits (93), Expect = 0.25, Method: Composition-based stats.
Identities = 24/123 (19%), Positives = 55/123 (44%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C+ ++ QL ++ + + + NS+L YC+ GD++ +++ +
Sbjct: 506 LIDGLCKDKRIDDANQLISQMISEGLQPNNITYNSILTHYCKQGDIKKAADILQTMTANG 565
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
D T+ LI CK +A + + M KG + + + +I L + +A+
Sbjct: 566 FEVDVVTYGTLINGLCKAGRTQVALKLLRGMRIKGMRATPKAYNPVIQSLFRRNNTRDAM 625
Query: 121 SVY 123
+++
Sbjct: 626 NLF 628
Score = 38.9 bits (89), Expect = 0.67, Method: Composition-based stats.
Identities = 30/126 (23%), Positives = 50/126 (39%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I A C EE LA K DV N ++ A C+ GD + + + ++
Sbjct: 366 LIVALCSGNRLEEALDLARQVTLKGLSPDVYTFNILINALCKVGDPQLALRLFEEMKSSG 425
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+PD T++ LI C A + +M G +++I L K EA
Sbjct: 426 CTPDEVTYNTLIDNLCSLGKLGKALDLLKEMESAGCPRSTVTYNTIIDGLCKKMRIEEAE 485
Query: 121 SVYNML 126
V++ +
Sbjct: 486 EVFDQM 491
Score = 38.9 bits (89), Expect = 0.78, Method: Composition-based stats.
Identities = 27/105 (25%), Positives = 44/105 (41%), Gaps = 6/105 (5%)
Query: 29 DVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYMLAYRTM 88
D V+ N +L M+ + V ++ E I PD TF+ L+K C+ A +
Sbjct: 149 DTVVYNHLLNVLVEGSKMKLLETVYSEMGERGIKPDVVTFNTLMKALCRAHQVRTAVLML 208
Query: 89 VDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVYNMLRYSKRSM 133
+M G P+E ++L M+ E S+ LR R +
Sbjct: 209 EEMSSSGVAPDETTFTTL------MQGFVEEGSIKAALRVKARML 247
Score = 38.5 bits (88), Expect = 0.93, Method: Composition-based stats.
Identities = 28/112 (25%), Positives = 48/112 (42%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C G + L + E+ V N+++ C+ +E V ++D
Sbjct: 436 LIDNLCSLGKLGKALDLLKEMESAGCPRSTVTYNTIIDGLCKKMRIEEAEEVFDQMDLQG 495
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGK 112
IS + TF+ LI CK+K A + + M +G QP +S++ H K
Sbjct: 496 ISRNAITFNTLIDGLCKDKRIDDANQLISQMISEGLQPNNITYNSILTHYCK 547
Score = 37.7 bits (86), Expect = 1.8, Method: Composition-based stats.
Identities = 29/127 (22%), Positives = 55/127 (43%), Gaps = 10/127 (7%)
Query: 1 MISAFCRSGCFEET-----KQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRK 55
+I+ +C+ G E+ +++A FE D + N+ + C+ G + + VM
Sbjct: 261 LINGYCKLGRVEDALGYIQQEIANGFEP-----DQITYNTFVNGLCQNGHVGHALKVMDV 315
Query: 56 LDELAISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRA 115
+ + PD T++I++ CK A + M +G P+ ++LI L
Sbjct: 316 MVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVERGCLPDITTFNTLIVALCSGNR 375
Query: 116 HSEALSV 122
EAL +
Sbjct: 376 LEEALDL 382
>gi|449532420|ref|XP_004173179.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At1g05670, mitochondrial-like [Cucumis sativus]
Length = 748
Score = 57.0 bits (136), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 61/127 (48%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+++ FC G E+ +L G K D + N+++ +C M + + +++
Sbjct: 579 LMNGFCMLGMLEDGDRLLGWMLEKGIVPDAITYNTLMKQHCIRNSMNTTTKIYKRMRNQG 638
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
++PD NT++ILIK CK + A+ +M KG+ P ++LI K R EA
Sbjct: 639 VAPDSNTYNILIKGHCKARNLKEAWFLYKEMIEKGYVPTVTSYNALIKRFYKKRKFXEAR 698
Query: 121 SVYNMLR 127
++ +R
Sbjct: 699 ELFEEMR 705
Score = 52.0 bits (123), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 38/165 (23%), Positives = 76/165 (46%), Gaps = 12/165 (7%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
M++ C++G E+ +L + E D + +++ AYCR GD++ +++++ +
Sbjct: 509 MVNGICKAGNIEQAIKLMKEMEVAGIDPDAITYTTVIDAYCRLGDIDKAHKLLQEMLDRG 568
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAH--SE 118
+ P TF++L+ FC M R + M KG P+ ++L M+ H
Sbjct: 569 LQPTVVTFNVLMNGFCMLGMLEDGDRLLGWMLEKGIVPDAITYNTL------MKQHCIRN 622
Query: 119 ALSVYNMLRYSKRSMCKALHEKILHILISG----KLLKDAYIVVK 159
+++ + R+ A +ILI G + LK+A+ + K
Sbjct: 623 SMNTTTKIYKRMRNQGVAPDSNTYNILIKGHCKARNLKEAWFLYK 667
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/98 (24%), Positives = 51/98 (52%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C+ G + +L + K + +V + NSM+ C+ G++E + +M++++
Sbjct: 474 LIDGLCKHGELDTANELLDEMRKKGLQLNVCIYNSMVNGICKAGNIEQAIKLMKEMEVAG 533
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQP 98
I PD T+ +I +C+ A++ + +M +G QP
Sbjct: 534 IDPDAITYTTVIDAYCRLGDIDKAHKLLQEMLDRGLQP 571
Score = 41.6 bits (96), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 27/121 (22%), Positives = 59/121 (48%), Gaps = 3/121 (2%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I + CR G +E +L + + DVV ++++ YC G+++ + +M +
Sbjct: 264 IIYSLCRLGKVKEAHRLLMQMDFRSSTPDVVSYSTVIDGYCHLGELKKALKLMDDMQIKG 323
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLI---FHLGKMRAHS 117
+ P+ T++ +I CK A + + +M + P+ + ++LI F LG +R +
Sbjct: 324 LKPNRYTYNSIILLLCKIGKSFEAEKVLREMMSQKIIPDNVVYTTLIHGFFKLGHVRTAN 383
Query: 118 E 118
+
Sbjct: 384 K 384
Score = 41.2 bits (95), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 23/97 (23%), Positives = 47/97 (48%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I F + G E + L + ++ K D V +++ YC+ G+M + + ++ ++
Sbjct: 404 LIQGFGQGGKVIEPQNLFHEMISRGLKPDEVTYTTLIDVYCKAGEMVNAFSLHNEMVQMG 463
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQ 97
++P+ T+ LI CK A + +M +KG Q
Sbjct: 464 MTPNIVTYGALIDGLCKHGELDTANELLDEMRKKGLQ 500
Score = 36.6 bits (83), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 28/129 (21%), Positives = 56/129 (43%), Gaps = 19/129 (14%)
Query: 28 YDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYMLAYRT 87
++ N ++ + CR G ++ ++ ++D + +PD ++ +I +C A +
Sbjct: 256 WNTTSYNIIIYSLCRLGKVKEAHRLLMQMDFRSSTPDVVSYSTVIDGYCHLGELKKALKL 315
Query: 88 MVDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVYNMLRYSKRSMCKALHEKILHILIS 147
M DM KG +P +S+I L K+ EA EK+L ++S
Sbjct: 316 MDDMQIKGLKPNRYTYNSIILLLCKIGKSFEA-------------------EKVLREMMS 356
Query: 148 GKLLKDAYI 156
K++ D +
Sbjct: 357 QKIIPDNVV 365
>gi|242069901|ref|XP_002450227.1| hypothetical protein SORBIDRAFT_05g002210 [Sorghum bicolor]
gi|241936070|gb|EES09215.1| hypothetical protein SORBIDRAFT_05g002210 [Sorghum bicolor]
Length = 894
Score = 57.0 bits (136), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/126 (30%), Positives = 65/126 (51%), Gaps = 5/126 (3%)
Query: 23 AKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYM 82
+++D DVV N+++ A+CR GD+E + ++R+ + P+ ++ LI FC M
Sbjct: 410 SRFDP-DVVTFNTLIAAFCREGDVEEALKLLREAIRRELEPNQLSYTPLIHGFCVRGEVM 468
Query: 83 LAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVYNMLRYSKRSMCKALHEKIL 142
+A +V+M +GH P+ +LI L EAL V + ++ M A I
Sbjct: 469 VASDLLVEMIGRGHTPDVVTLGALIHGLVVSGQVDEALMVREKM-AERQVMPDA---NIY 524
Query: 143 HILISG 148
++LISG
Sbjct: 525 NVLISG 530
Score = 52.4 bits (124), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 32/133 (24%), Positives = 66/133 (49%), Gaps = 6/133 (4%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDK---YDVVLLNSMLCAYCRTGDMESVMHVMRKLD 57
M+ C G EE ++L EA++ + V N ++ YCR GD+ + ++ +++
Sbjct: 282 MVRGLCLEGRVEEGRRL---IEARWGEGCVPGAVFYNVLIDGYCRRGDVGRGLLLLGEME 338
Query: 58 ELAISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHS 117
I P T+ +I + ++ + +M +G P ++ +++I+ L K R+ S
Sbjct: 339 MKGIMPTVVTYGAIIHWLGRKSDLTKIESLLWEMKERGLSPNVQIYNTVIYALCKCRSAS 398
Query: 118 EALSVYNMLRYSK 130
+AL+V N + S+
Sbjct: 399 QALAVLNQMVASR 411
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 28/107 (26%), Positives = 53/107 (49%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I FC G L + + DVV L +++ +G ++ + V K+ E
Sbjct: 457 LIHGFCVRGEVMVASDLLVEMIGRGHTPDVVTLGALIHGLVVSGQVDEALMVREKMAERQ 516
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLI 107
+ PD N +++LI CK++M A +V+M + QP++ + ++LI
Sbjct: 517 VMPDANIYNVLISGLCKKRMLSAAKNLLVEMLEQKVQPDKFVYTTLI 563
Score = 45.8 bits (107), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 29/107 (27%), Positives = 51/107 (47%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I F RS + +++ E K D+V N+M+ YC++G M + M + ++
Sbjct: 562 LIDGFIRSDKLSDARKIFEFMEEKGGYRDIVAYNAMIKGYCKSGMMNEAVMCMSSMRKVG 621
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLI 107
PD T+ LI + K+ A R + DM ++ +P +SLI
Sbjct: 622 CIPDEFTYTTLIDGYAKKGDIKAALRFLCDMMKRRCKPNIVTYASLI 668
>gi|380875521|gb|AFF27500.1| PPR domain-containing protein [Oryza sativa Indica Group]
Length = 742
Score = 57.0 bits (136), Expect = 2e-06, Method: Composition-based stats.
Identities = 33/122 (27%), Positives = 59/122 (48%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+++ C++G EE K + + D+ N+++ A C +E + + R++
Sbjct: 327 VVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLARQVTVKG 386
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+SPD TF+ILI CK LA R +M G P+E ++LI +L + +AL
Sbjct: 387 VSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKAL 446
Query: 121 SV 122
+
Sbjct: 447 DL 448
Score = 42.4 bits (98), Expect = 0.070, Method: Composition-based stats.
Identities = 36/155 (23%), Positives = 59/155 (38%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+A C EE LA K DV N ++ A C+ GD + + ++
Sbjct: 362 LIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSG 421
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+PD T++ LI C A + DM G +++I L K EA
Sbjct: 422 CTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAE 481
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLKDAY 155
V++ + S ++ L K + DA+
Sbjct: 482 EVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAF 516
Score = 40.4 bits (93), Expect = 0.28, Method: Composition-based stats.
Identities = 25/123 (20%), Positives = 54/123 (43%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C+ ++ L ++ + + + NS+L YC+ GD++ ++ +
Sbjct: 502 LIDGLCKDKKIDDAFGLINQMISEGLQPNNITYNSILTHYCKQGDIKKAADILETMTANG 561
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
D T+ LI CK +A + + M KG +P + + ++ L + +AL
Sbjct: 562 FEVDVVTYGTLINGLCKAGRTQVALKVLRGMRIKGMRPTPKAYNPVLQSLFRRNNIRDAL 621
Query: 121 SVY 123
S++
Sbjct: 622 SLF 624
Score = 40.0 bits (92), Expect = 0.32, Method: Composition-based stats.
Identities = 28/112 (25%), Positives = 48/112 (42%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C G + L D E+ + N+++ C+ +E V ++D
Sbjct: 432 LIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQG 491
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGK 112
IS + TF+ LI CK+K A+ + M +G QP +S++ H K
Sbjct: 492 ISRNAITFNTLIDGLCKDKKIDDAFGLINQMISEGLQPNNITYNSILTHYCK 543
Score = 38.9 bits (89), Expect = 0.76, Method: Composition-based stats.
Identities = 31/123 (25%), Positives = 53/123 (43%), Gaps = 10/123 (8%)
Query: 29 DVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYMLAYRTM 88
D V+ N +L M+ + V ++ I PD TF+ L+K C+ A +
Sbjct: 145 DTVVYNHLLNVLVEGSKMKLLESVYSEMGARGIKPDVVTFNTLMKALCRAHQVRTAVLML 204
Query: 89 VDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVYNMLRYSKRSM---CKALHEKILHIL 145
+M +G P+E ++L M+ E S+ LR R + C A + ++L
Sbjct: 205 EEMSSRGVAPDETTFTTL------MQGFVEEGSIEAALRVKARMLEMGCSATKVTV-NVL 257
Query: 146 ISG 148
I+G
Sbjct: 258 ING 260
Score = 38.1 bits (87), Expect = 1.2, Method: Composition-based stats.
Identities = 19/69 (27%), Positives = 34/69 (49%)
Query: 27 KYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYMLAYR 86
K DVV N+++ A CR + + + ++ ++ ++PD TF L++ F +E A R
Sbjct: 178 KPDVVTFNTLMKALCRAHQVRTAVLMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALR 237
Query: 87 TMVDMHRKG 95
M G
Sbjct: 238 VKARMLEMG 246
>gi|115454009|ref|NP_001050605.1| Os03g0597200 [Oryza sativa Japonica Group]
gi|28875991|gb|AAO60000.1| putative pentatricopeptide repeat protein [Oryza sativa Japonica
Group]
gi|108709658|gb|ABF97453.1| DEAD/DEAH box helicase family protein, putative, expressed [Oryza
sativa Japonica Group]
gi|113549076|dbj|BAF12519.1| Os03g0597200 [Oryza sativa Japonica Group]
Length = 742
Score = 57.0 bits (136), Expect = 3e-06, Method: Composition-based stats.
Identities = 33/122 (27%), Positives = 59/122 (48%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+++ C++G EE K + + D+ N+++ A C +E + + R++
Sbjct: 327 VVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLARQVTVKG 386
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+SPD TF+ILI CK LA R +M G P+E ++LI +L + +AL
Sbjct: 387 VSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKAL 446
Query: 121 SV 122
+
Sbjct: 447 DL 448
Score = 42.4 bits (98), Expect = 0.073, Method: Composition-based stats.
Identities = 36/158 (22%), Positives = 61/158 (38%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+A C EE LA K DV N ++ A C+ GD + + ++
Sbjct: 362 LIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSG 421
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+PD T++ LI C A + DM G +++I L K EA
Sbjct: 422 CTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAE 481
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLKDAYIVV 158
V++ + S ++ L K + DA+ ++
Sbjct: 482 EVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAFELI 519
Score = 41.6 bits (96), Expect = 0.099, Method: Composition-based stats.
Identities = 25/123 (20%), Positives = 55/123 (44%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C+ ++ +L ++ + + + NS+L YC+ GD++ ++ +
Sbjct: 502 LIDGLCKDKKIDDAFELINQMISEGLQPNNITYNSILTHYCKQGDIKKAADILETMTANG 561
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
D T+ LI CK +A + + M KG +P + + ++ L + +AL
Sbjct: 562 FEVDVVTYGTLINGLCKAGRTQVALKVLRGMRIKGMRPTPKAYNPVLQSLFRRNNIRDAL 621
Query: 121 SVY 123
S++
Sbjct: 622 SLF 624
Score = 40.8 bits (94), Expect = 0.18, Method: Composition-based stats.
Identities = 28/112 (25%), Positives = 48/112 (42%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C G + L D E+ + N+++ C+ +E V ++D
Sbjct: 432 LIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQG 491
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGK 112
IS + TF+ LI CK+K A+ + M +G QP +S++ H K
Sbjct: 492 ISRNAITFNTLIDGLCKDKKIDDAFELINQMISEGLQPNNITYNSILTHYCK 543
Score = 38.9 bits (89), Expect = 0.77, Method: Composition-based stats.
Identities = 31/123 (25%), Positives = 53/123 (43%), Gaps = 10/123 (8%)
Query: 29 DVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYMLAYRTM 88
D V+ N +L M+ + V ++ I PD TF+ L+K C+ A +
Sbjct: 145 DTVVYNHLLNVLVEGSKMKLLESVYSEMGARGIKPDVVTFNTLMKALCRAHQVRTAVLML 204
Query: 89 VDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVYNMLRYSKRSM---CKALHEKILHIL 145
+M +G P+E ++L M+ E S+ LR R + C A + ++L
Sbjct: 205 EEMSSRGVAPDETTFTTL------MQGFVEEGSIEAALRVKARMLEMGCSATKVTV-NVL 257
Query: 146 ISG 148
I+G
Sbjct: 258 ING 260
Score = 38.1 bits (87), Expect = 1.2, Method: Composition-based stats.
Identities = 19/69 (27%), Positives = 34/69 (49%)
Query: 27 KYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYMLAYR 86
K DVV N+++ A CR + + + ++ ++ ++PD TF L++ F +E A R
Sbjct: 178 KPDVVTFNTLMKALCRAHQVRTAVLMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALR 237
Query: 87 TMVDMHRKG 95
M G
Sbjct: 238 VKARMLEMG 246
>gi|125544747|gb|EAY90886.1| hypothetical protein OsI_12495 [Oryza sativa Indica Group]
Length = 742
Score = 57.0 bits (136), Expect = 3e-06, Method: Composition-based stats.
Identities = 33/122 (27%), Positives = 59/122 (48%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+++ C++G EE K + + D+ N+++ A C +E + + R++
Sbjct: 327 VVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLARQVTVKG 386
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+SPD TF+ILI CK LA R +M G P+E ++LI +L + +AL
Sbjct: 387 VSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKAL 446
Query: 121 SV 122
+
Sbjct: 447 DL 448
Score = 42.4 bits (98), Expect = 0.073, Method: Composition-based stats.
Identities = 36/158 (22%), Positives = 61/158 (38%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+A C EE LA K DV N ++ A C+ GD + + ++
Sbjct: 362 LIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSG 421
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+PD T++ LI C A + DM G +++I L K EA
Sbjct: 422 CTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAE 481
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLKDAYIVV 158
V++ + S ++ L K + DA+ ++
Sbjct: 482 EVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAFELI 519
Score = 41.6 bits (96), Expect = 0.099, Method: Composition-based stats.
Identities = 25/123 (20%), Positives = 55/123 (44%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C+ ++ +L ++ + + + NS+L YC+ GD++ ++ +
Sbjct: 502 LIDGLCKDKKIDDAFELINQMISEGLQPNNITYNSILTHYCKQGDIKKAADILETMTANG 561
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
D T+ LI CK +A + + M KG +P + + ++ L + +AL
Sbjct: 562 FEVDVVTYGTLINGLCKAGRTQVALKVLRGMRIKGMRPTPKAYNPVLQSLFRRNNIRDAL 621
Query: 121 SVY 123
S++
Sbjct: 622 SLF 624
Score = 40.8 bits (94), Expect = 0.18, Method: Composition-based stats.
Identities = 28/112 (25%), Positives = 48/112 (42%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C G + L D E+ + N+++ C+ +E V ++D
Sbjct: 432 LIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQG 491
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGK 112
IS + TF+ LI CK+K A+ + M +G QP +S++ H K
Sbjct: 492 ISRNAITFNTLIDGLCKDKKIDDAFELINQMISEGLQPNNITYNSILTHYCK 543
Score = 38.5 bits (88), Expect = 0.98, Method: Composition-based stats.
Identities = 31/123 (25%), Positives = 53/123 (43%), Gaps = 10/123 (8%)
Query: 29 DVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYMLAYRTM 88
D V+ N +L M+ + V ++ I PD TF+ L+K C+ A +
Sbjct: 145 DTVVYNHLLNVLVEGSKMKLLESVYSEMGARGIKPDVVTFNTLMKALCRAHQVRTAVIML 204
Query: 89 VDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVYNMLRYSKRSM---CKALHEKILHIL 145
+M +G P+E ++L M+ E S+ LR R + C A + ++L
Sbjct: 205 EEMSSRGVAPDETTFTTL------MQGFVEEGSIEAALRVKARMLEMGCSATKVTV-NVL 257
Query: 146 ISG 148
I+G
Sbjct: 258 ING 260
Score = 38.1 bits (87), Expect = 1.4, Method: Composition-based stats.
Identities = 19/69 (27%), Positives = 34/69 (49%)
Query: 27 KYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYMLAYR 86
K DVV N+++ A CR + + + ++ ++ ++PD TF L++ F +E A R
Sbjct: 178 KPDVVTFNTLMKALCRAHQVRTAVIMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALR 237
Query: 87 TMVDMHRKG 95
M G
Sbjct: 238 VKARMLEMG 246
>gi|115475728|ref|NP_001061460.1| Os08g0290000 [Oryza sativa Japonica Group]
gi|38175588|dbj|BAD01297.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|38175668|dbj|BAD01373.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|113623429|dbj|BAF23374.1| Os08g0290000 [Oryza sativa Japonica Group]
gi|125602875|gb|EAZ42200.1| hypothetical protein OsJ_26764 [Oryza sativa Japonica Group]
Length = 806
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 35/157 (22%), Positives = 71/157 (45%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
MI C+ EE +L GD + K D+ N++L AYC G ME H++ ++
Sbjct: 508 MIRGCCKDSKMEEAIKLHGDMTRRGFKPDLFTFNTLLHAYCNLGKMEETFHLLDQMKTEG 567
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ PD ++ +I CK K A + ++ +G +P + ++LI G+ S A+
Sbjct: 568 LQPDIVSYGTIIDGHCKAKDIRKAKEYLTELMDRGLKPNVFIYNALIGGYGRNGDISGAI 627
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLKDAYIV 157
++ + + +++ + L+++A +
Sbjct: 628 DAVETMKSNGIQPTNVTYGSLMYWMCHAGLVEEAKTI 664
Score = 43.9 bits (102), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 24/107 (22%), Positives = 51/107 (47%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
MI A C++G + ++ + + VV N ++ A C++G +E + ++++
Sbjct: 227 MIKALCKAGKVDAGFEMLAELWRAGLQPTVVTYNVLMDALCKSGRVEEAFRLKGRMEQGG 286
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLI 107
++P TF ILI + + + + +M + G P E + + LI
Sbjct: 287 MTPSVVTFGILINGLARGERFGEVGIVLQEMEQLGVSPNEVIYNELI 333
Score = 42.4 bits (98), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 32/160 (20%), Positives = 71/160 (44%), Gaps = 1/160 (0%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I CR G + +L + K K V N + A C+ G+ME ++ + +
Sbjct: 332 LIGWHCRKGHCSQALRLFDEMVLKKMKPTAVTYNLIAKALCKEGEMERAERILEDMLSIG 391
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVD-MHRKGHQPEEELCSSLIFHLGKMRAHSEA 119
++ F+ ++ + + + + ++ + M +G +P + L ++ + L K H EA
Sbjct: 392 MTVHCGLFNTVVAWLLQRTRRLESVVSITNEMVTRGMRPNDPLMTACMRELCKGGKHQEA 451
Query: 120 LSVYNMLRYSKRSMCKALHEKILHILISGKLLKDAYIVVK 159
+ ++ + A ++H L GK +K+A V++
Sbjct: 452 VGIWFKTLNKGLGVNLATSNALIHGLCEGKYMKEATKVIQ 491
Score = 40.4 bits (93), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 25/98 (25%), Positives = 46/98 (46%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ A C+SG EE +L G E VV ++ R V V++++++L
Sbjct: 262 LMDALCKSGRVEEAFRLKGRMEQGGMTPSVVTFGILINGLARGERFGEVGIVLQEMEQLG 321
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQP 98
+SP+ ++ LI + C++ A R +M K +P
Sbjct: 322 VSPNEVIYNELIGWHCRKGHCSQALRLFDEMVLKKMKP 359
>gi|359487666|ref|XP_002277942.2| PREDICTED: pentatricopeptide repeat-containing protein
At1g09820-like [Vitis vinifera]
Length = 609
Score = 57.0 bits (136), Expect = 3e-06, Method: Composition-based stats.
Identities = 38/154 (24%), Positives = 73/154 (47%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ C+ G F++ + D +A V+ N+++ YC+ G M +++++
Sbjct: 235 VINGLCKVGKFQKAGDVVEDMKAWGFSPSVITYNTIIDGYCKAGKMFKADALLKEMVAKR 294
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
I P+ TF+ILI FC+++ A + +M R+G QP +SLI L EAL
Sbjct: 295 IHPNEITFNILIDGFCRDENVTAAKKVFEEMQRQGLQPNVVTYNSLINGLCSNGKLDEAL 354
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLKDA 154
+ + + + +++ K+LK+A
Sbjct: 355 GLQDKMSGMGLKPNVVTYNALINGFCKKKMLKEA 388
Score = 55.1 bits (131), Expect = 1e-05, Method: Composition-based stats.
Identities = 31/126 (24%), Positives = 62/126 (49%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I FCR K++ + + + + +VV NS++ C G ++ + + K+ +
Sbjct: 305 LIDGFCRDENVTAAKKVFEEMQRQGLQPNVVTYNSLINGLCSNGKLDEALGLQDKMSGMG 364
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ P+ T++ LI FCK+KM A + D+ ++G P ++LI GK +A
Sbjct: 365 LKPNVVTYNALINGFCKKKMLKEAREMLDDIGKRGLAPNVITFNTLIDAYGKAGRMDDAF 424
Query: 121 SVYNML 126
+ +M+
Sbjct: 425 LLRSMM 430
Score = 52.0 bits (123), Expect = 7e-05, Method: Composition-based stats.
Identities = 26/97 (26%), Positives = 51/97 (52%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I FCR G +E ++LA + E K D+V N ++ A C+ G+ + ++ ++ E+
Sbjct: 445 LIVGFCREGNVKEARKLAKEMEGNGLKADLVTYNILVDALCKKGETRKAVRLLDEMFEVG 504
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQ 97
++P + T++ LI + +E A M +KG +
Sbjct: 505 LNPSHLTYNALIDGYFREGNSTAALNVRTLMEKKGRR 541
Score = 37.7 bits (86), Expect = 1.5, Method: Composition-based stats.
Identities = 22/103 (21%), Positives = 48/103 (46%)
Query: 29 DVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYMLAYRTM 88
+V N ++ +CR G+++ + ++++ + D T++IL+ CK+ A R +
Sbjct: 438 NVSTYNCLIVGFCREGNVKEARKLAKEMEGNGLKADLVTYNILVDALCKKGETRKAVRLL 497
Query: 89 VDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVYNMLRYSKR 131
+M G P ++LI + + AL+V ++ R
Sbjct: 498 DEMFEVGLNPSHLTYNALIDGYFREGNSTAALNVRTLMEKKGR 540
>gi|414586743|tpg|DAA37314.1| TPA: hypothetical protein ZEAMMB73_981845 [Zea mays]
Length = 524
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 33/100 (33%), Positives = 57/100 (57%), Gaps = 2/100 (2%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I F R G +ET +L K + DVV+ N+++ ++C GDME +M ++++
Sbjct: 330 LIYVFSRKGQVQETDRLFNVAVKKGIRPDVVMYNALINSHCTGGDMERAYEIMAEMEKKR 389
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVD-MHRKGHQPE 99
I PD T++ L++ FC A RT++D M ++G QP+
Sbjct: 390 IPPDDMTYNTLMRGFCLLGRLDEA-RTLIDEMTKRGIQPD 428
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/110 (25%), Positives = 53/110 (48%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ FC G +E + L + + + D+V N+++ Y GD++ + V ++ +
Sbjct: 400 LMRGFCLLGRLDEARTLIDEMTKRGIQPDLVSYNTLISGYSMKGDIKDALRVRDEMMDKG 459
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHL 110
+P T++ LI+ CK + A M +M KG P++ SLI L
Sbjct: 460 FNPTLMTYNALIQGLCKIRQGDDAENLMKEMVAKGITPDDSTYISLIEGL 509
Score = 42.0 bits (97), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 27/119 (22%), Positives = 55/119 (46%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I++ C G E ++ + E K D + N+++ +C G ++ ++ ++ +
Sbjct: 365 LINSHCTGGDMERAYEIMAEMEKKRIPPDDMTYNTLMRGFCLLGRLDEARTLIDEMTKRG 424
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEA 119
I PD +++ LI + + A R +M KG P ++LI L K+R +A
Sbjct: 425 IQPDLVSYNTLISGYSMKGDIKDALRVRDEMMDKGFNPTLMTYNALIQGLCKIRQGDDA 483
Score = 40.4 bits (93), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 33/135 (24%), Positives = 61/135 (45%), Gaps = 2/135 (1%)
Query: 27 KYDVVLLNSMLCAYCRTGDMESVMHVMRKLDEL-AISPDYNTFHILIKYFCKEKMYMLAY 85
+ + V N+++ +C G +++ + VMR++ E I+PD T+ LI +CK A
Sbjct: 144 RPNAVTYNTVIAGFCARGRVQAALEVMREMRERGGIAPDKYTYATLISGWCKIGRMEDAV 203
Query: 86 RTMVDMHRKGH-QPEEELCSSLIFHLGKMRAHSEALSVYNMLRYSKRSMCKALHEKILHI 144
+ +M KG P + ++LI + AL + +M A + ++H
Sbjct: 204 KVFDEMLTKGEVAPSAVMYNALIGGYCDVGKLDVALQYREDMVQRGIAMTVATYNLLMHA 263
Query: 145 LISGKLLKDAYIVVK 159
L DAY V++
Sbjct: 264 LFMDARASDAYAVLE 278
Score = 36.2 bits (82), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 31/161 (19%), Positives = 62/161 (38%), Gaps = 36/161 (22%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYD-KYDVVLLNSMLCAYCRTGDMESVMH-------- 51
+IS +C+ G E+ ++ + K + V+ N+++ YC G ++ +
Sbjct: 189 LISGWCKIGRMEDAVKVFDEMLTKGEVAPSAVMYNALIGGYCDVGKLDVALQYREDMVQR 248
Query: 52 ---------------------------VMRKLDELAISPDYNTFHILIKYFCKEKMYMLA 84
V+ ++ + SPD T++ILI +CKE A
Sbjct: 249 GIAMTVATYNLLMHALFMDARASDAYAVLEEMQKNGFSPDVFTYNILINGYCKEGNEKKA 308
Query: 85 YRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVYNM 125
+M +KG + +SLI+ + E ++N+
Sbjct: 309 LEVFEEMSQKGVRATAVTYTSLIYVFSRKGQVQETDRLFNV 349
>gi|255565812|ref|XP_002523895.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223536825|gb|EEF38464.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 784
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 49/93 (52%), Gaps = 5/93 (5%)
Query: 8 SGCFEETKQLAG-----DFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAIS 62
+GCF+ + L G E K K + V N ++ Y + G M++ + +RK++E S
Sbjct: 360 NGCFDCSSSLKGFELIDKMEGKGVKPNAVTYNVVVKWYVKEGKMDNAGNELRKMEESGFS 419
Query: 63 PDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKG 95
PD TF+ LI +CK A+R M +M RKG
Sbjct: 420 PDCVTFNTLINGYCKAGRLSEAFRMMDEMSRKG 452
Score = 44.7 bits (104), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 35/155 (22%), Positives = 64/155 (41%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C+ G +E +L + E DVV N+++ ++ K++
Sbjct: 323 LIGGLCKDGKIDEAFRLKDEMENLKLLPDVVTYNTLINGCFDCSSSLKGFELIDKMEGKG 382
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ P+ T+++++K++ KE A + M G P+ ++LI K SEA
Sbjct: 383 VKPNAVTYNVVVKWYVKEGKMDNAGNELRKMEESGFSPDCVTFNTLINGYCKAGRLSEAF 442
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLKDAY 155
+ + + M ILH L + L DAY
Sbjct: 443 RMMDEMSRKGLKMNSVTLNTILHTLCGERKLDDAY 477
Score = 43.9 bits (102), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 33/148 (22%), Positives = 67/148 (45%), Gaps = 4/148 (2%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I + + G E +L + + K ++ N+M+ C +G + + + +L E
Sbjct: 498 LIMGYFKDGKSVEAMKLWDEMKEKEIIPSIITYNTMIGGLCHSGKTDQSIDKLNELLESG 557
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ PD T++ +I +C+E A++ M +K +P+ C+ L+ L +AL
Sbjct: 558 LVPDETTYNTIILGYCREGQVEKAFQFHNKMVKKSFKPDLFTCNILLRGLCTEGMLDKAL 617
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISG 148
++N S KA+ + +ISG
Sbjct: 618 KLFNTW----ISKGKAIDAVTYNTIISG 641
Score = 39.7 bits (91), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 29/122 (23%), Positives = 49/122 (40%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
MI C SG +++ + D N+++ YCR G +E K+ + +
Sbjct: 533 MIGGLCHSGKTDQSIDKLNELLESGLVPDETTYNTIILGYCREGQVEKAFQFHNKMVKKS 592
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
PD T +IL++ C E M A + KG + +++I L K EA
Sbjct: 593 FKPDLFTCNILLRGLCTEGMLDKALKLFNTWISKGKAIDAVTYNTIISGLCKEDRFEEAF 652
Query: 121 SV 122
+
Sbjct: 653 DL 654
Score = 36.2 bits (82), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 23/107 (21%), Positives = 47/107 (43%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ C+ G E + L D + + N ++ YC+ G ++ V+ + +
Sbjct: 253 ILDVLCKKGKLNEARDLLLDMKNNGLLPNRNTFNILVSGYCKLGWLKEAAQVIDLMAQNN 312
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLI 107
+ PD T+++LI CK+ A+R +M P+ ++LI
Sbjct: 313 VLPDVWTYNMLIGGLCKDGKIDEAFRLKDEMENLKLLPDVVTYNTLI 359
Score = 35.8 bits (81), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 19/99 (19%), Positives = 46/99 (46%)
Query: 29 DVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYMLAYRTM 88
D V N+++ YC+ G + +M ++ + + T + ++ C E+ AY+ +
Sbjct: 421 DCVTFNTLINGYCKAGRLSEAFRMMDEMSRKGLKMNSVTLNTILHTLCGERKLDDAYKLL 480
Query: 89 VDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVYNMLR 127
++G+ +E +LI K EA+ +++ ++
Sbjct: 481 SSASKRGYFVDEVSYGTLIMGYFKDGKSVEAMKLWDEMK 519
>gi|297849070|ref|XP_002892416.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297338258|gb|EFH68675.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 459
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 37/159 (23%), Positives = 74/159 (46%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ C +G + E K+L D E + K +V ++ + G ++ ++ ++ +
Sbjct: 262 LMKGLCCNGEYNEAKKLMFDMEYRGCKPGLVNYGVLMSDLGKRGKIDEAKILLGEMKKRR 321
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
I PD+ ++IL+ + C E AYRT+ +M KG +P ++ ++ L
Sbjct: 322 IKPDFVIYNILVNHLCTEGRVPEAYRTLTEMQMKGCKPNAATYRMIVDGFCRIGDFDSGL 381
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLKDAYIVVK 159
+V N + S+ S A +++ LI G L A V++
Sbjct: 382 NVLNAMLASRHSPTPATFVRMVSGLIKGGNLDHACFVLE 420
Score = 42.0 bits (97), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 41/90 (45%)
Query: 30 VVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYMLAYRTMV 89
VV NS++ CR DM ++ + + I P+ TF +L+K C Y A + M
Sbjct: 221 VVTYNSLIGFLCRNNDMGKATSLLEDMIKKRIRPNAVTFGLLMKGLCCNGEYNEAKKLMF 280
Query: 90 DMHRKGHQPEEELCSSLIFHLGKMRAHSEA 119
DM +G +P L+ LGK EA
Sbjct: 281 DMEYRGCKPGLVNYGVLMSDLGKRGKIDEA 310
>gi|357121540|ref|XP_003562477.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g32630-like [Brachypodium distachyon]
Length = 556
Score = 57.0 bits (136), Expect = 3e-06, Method: Composition-based stats.
Identities = 28/98 (28%), Positives = 46/98 (46%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
MI +CR G E+ ++ E + D+ N++ C CR ME ++ + E
Sbjct: 329 MIDGYCRHGMVEKALEIKAVMEKMGIELDIYTYNTLACGLCRVNRMEDAKKLLHIMAEKG 388
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQP 98
++P+Y ++ LI KE + A R DM KG +P
Sbjct: 389 VAPNYVSYTTLISIHAKEGDMVEARRLFRDMEGKGSRP 426
Score = 47.8 bits (112), Expect = 0.001, Method: Composition-based stats.
Identities = 26/107 (24%), Positives = 52/107 (48%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ FC+ G E + L D + + ++ ++ N+M+ YCR G +E + + ++++
Sbjct: 294 LINGFCKIGQIEAAEMLLADMQLRGVGHNQIVFNTMIDGYCRHGMVEKALEIKAVMEKMG 353
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLI 107
I D T++ L C+ A + + M KG P ++LI
Sbjct: 354 IELDIYTYNTLACGLCRVNRMEDAKKLLHIMAEKGVAPNYVSYTTLI 400
Score = 39.3 bits (90), Expect = 0.62, Method: Composition-based stats.
Identities = 22/95 (23%), Positives = 42/95 (44%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ R+G + + + + + K DV ++++ AYCR G++ V +
Sbjct: 224 LVDGLSRAGDISKVEAVYDEMKRKNVAGDVYFYSAVINAYCRGGNVRRASEVFDECVGHG 283
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKG 95
+ P+ T+ LI FCK A + DM +G
Sbjct: 284 VEPNERTYGALINGFCKIGQIEAAEMLLADMQLRG 318
>gi|296089773|emb|CBI39592.3| unnamed protein product [Vitis vinifera]
Length = 577
Score = 56.6 bits (135), Expect = 3e-06, Method: Composition-based stats.
Identities = 38/154 (24%), Positives = 73/154 (47%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ C+ G F++ + D +A V+ N+++ YC+ G M +++++
Sbjct: 235 VINGLCKVGKFQKAGDVVEDMKAWGFSPSVITYNTIIDGYCKAGKMFKADALLKEMVAKR 294
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
I P+ TF+ILI FC+++ A + +M R+G QP +SLI L EAL
Sbjct: 295 IHPNEITFNILIDGFCRDENVTAAKKVFEEMQRQGLQPNVVTYNSLINGLCSNGKLDEAL 354
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLKDA 154
+ + + + +++ K+LK+A
Sbjct: 355 GLQDKMSGMGLKPNVVTYNALINGFCKKKMLKEA 388
Score = 54.7 bits (130), Expect = 1e-05, Method: Composition-based stats.
Identities = 31/126 (24%), Positives = 62/126 (49%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I FCR K++ + + + + +VV NS++ C G ++ + + K+ +
Sbjct: 305 LIDGFCRDENVTAAKKVFEEMQRQGLQPNVVTYNSLINGLCSNGKLDEALGLQDKMSGMG 364
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ P+ T++ LI FCK+KM A + D+ ++G P ++LI GK +A
Sbjct: 365 LKPNVVTYNALINGFCKKKMLKEAREMLDDIGKRGLAPNVITFNTLIDAYGKAGRMDDAF 424
Query: 121 SVYNML 126
+ +M+
Sbjct: 425 LLRSMM 430
Score = 50.1 bits (118), Expect = 3e-04, Method: Composition-based stats.
Identities = 32/104 (30%), Positives = 52/104 (50%), Gaps = 9/104 (8%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I FCR G +E ++LA + E K D+V N ++ A C+ G+ +R LDE+
Sbjct: 445 LIVGFCREGNVKEARKLAKEMEGNGLKADLVTYNILVDALCKKGETRK---AVRLLDEMT 501
Query: 61 I------SPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQP 98
+ + T+++LIK FC + A R + +M KG P
Sbjct: 502 LMEKKGRRANIVTYNVLIKGFCNKGKLEEANRLLNEMLEKGLIP 545
>gi|357499959|ref|XP_003620268.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355495283|gb|AES76486.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 652
Score = 56.6 bits (135), Expect = 3e-06, Method: Composition-based stats.
Identities = 35/126 (27%), Positives = 61/126 (48%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+++AFC+ G +E K + + K + V NS++ YC ++ + + +
Sbjct: 301 LVNAFCKDGKMKEGKTVFDMMMKQGIKPNFVTYNSLMDGYCLVKEVNKAKSIFNTMAQGG 360
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
++PD ++ I+I FCK K + A +MHRK P+ SSLI L K S AL
Sbjct: 361 VNPDIQSYSIMINGFCKIKKFDEAMNLFKEMHRKNIIPDVVTYSSLIDGLSKSGRISYAL 420
Query: 121 SVYNML 126
+ + +
Sbjct: 421 QLVDQM 426
Score = 44.7 bits (104), Expect = 0.012, Method: Composition-based stats.
Identities = 32/127 (25%), Positives = 63/127 (49%), Gaps = 2/127 (1%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I + C+ E L + +K DVV ++++ +C G + + + K+
Sbjct: 231 IIDSMCKVKLVNEAFDLFSEMISKGISPDVVTYSALISGFCILGKLNDAIDLFNKMILEN 290
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVD-MHRKGHQPEEELCSSLIFHLGKMRAHSEA 119
I PD TF+IL+ FCK+ M +T+ D M ++G +P +SL+ ++ ++A
Sbjct: 291 IKPDVYTFNILVNAFCKDGK-MKEGKTVFDMMMKQGIKPNFVTYNSLMDGYCLVKEVNKA 349
Query: 120 LSVYNML 126
S++N +
Sbjct: 350 KSIFNTM 356
Score = 42.7 bits (99), Expect = 0.056, Method: Composition-based stats.
Identities = 30/123 (24%), Positives = 56/123 (45%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+IS FC G + L + K DV N ++ A+C+ G M+ V + +
Sbjct: 266 LISGFCILGKLNDAIDLFNKMILENIKPDVYTFNILVNAFCKDGKMKEGKTVFDMMMKQG 325
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
I P++ T++ L+ +C K A M + G P+ + S +I K++ EA+
Sbjct: 326 IKPNFVTYNSLMDGYCLVKEVNKAKSIFNTMAQGGVNPDIQSYSIMINGFCKIKKFDEAM 385
Query: 121 SVY 123
+++
Sbjct: 386 NLF 388
Score = 40.0 bits (92), Expect = 0.32, Method: Composition-based stats.
Identities = 29/126 (23%), Positives = 55/126 (43%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
MI+ FC+ F+E L + K DVV +S++ ++G + + ++ ++ +
Sbjct: 371 MINGFCKIKKFDEAMNLFKEMHRKNIIPDVVTYSSLIDGLSKSGRISYALQLVDQMHDRG 430
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ P T++ ++ CK A + + KG QP S LI L + +A
Sbjct: 431 VPPTIRTYNSILDALCKIHQVDKAIALLTKLKDKGIQPNMYTYSILIKGLCQSGKLEDAR 490
Query: 121 SVYNML 126
V+ L
Sbjct: 491 KVFEGL 496
Score = 39.3 bits (90), Expect = 0.62, Method: Composition-based stats.
Identities = 23/126 (18%), Positives = 57/126 (45%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C G ++ A +D + +++ C+ G+ + + +++++D
Sbjct: 161 LIKGLCLKGQIQQAFLFHDKVVALGFHFDQISYGTLIHGLCKVGETRAALDLLQRVDGNL 220
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ P+ ++ +I CK K+ A+ +M KG P+ S+LI + ++A+
Sbjct: 221 VQPNVVMYNTIIDSMCKVKLVNEAFDLFSEMISKGISPDVVTYSALISGFCILGKLNDAI 280
Query: 121 SVYNML 126
++N +
Sbjct: 281 DLFNKM 286
Score = 37.7 bits (86), Expect = 1.8, Method: Composition-based stats.
Identities = 21/100 (21%), Positives = 46/100 (46%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C+SG E+ +++ K +V M+ +C G + ++ K+++
Sbjct: 476 LIKGLCQSGKLEDARKVFEGLLVKGHNLNVDTYTIMIQGFCVEGLFNEALALLSKMEDNG 535
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEE 100
PD T+ I+I K+ +A + + +M +G +P +
Sbjct: 536 CIPDAKTYEIIILSLFKKDENDMAEKLLREMIARGVRPRQ 575
Score = 37.0 bits (84), Expect = 2.8, Method: Composition-based stats.
Identities = 24/96 (25%), Positives = 41/96 (42%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I +SG QL + + NS+L A C+ ++ + ++ KL +
Sbjct: 406 LIDGLSKSGRISYALQLVDQMHDRGVPPTIRTYNSILDALCKIHQVDKAIALLTKLKDKG 465
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGH 96
I P+ T+ ILIK C+ A + + KGH
Sbjct: 466 IQPNMYTYSILIKGLCQSGKLEDARKVFEGLLVKGH 501
>gi|224092696|ref|XP_002309701.1| predicted protein [Populus trichocarpa]
gi|222855677|gb|EEE93224.1| predicted protein [Populus trichocarpa]
Length = 597
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 33/124 (26%), Positives = 60/124 (48%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ C+ G F + +L D AK + DV N+++ C+ G+ + +++K++E
Sbjct: 169 LINGLCKVGEFAQAVELFDDMVAKGCQPDVYTYNTIINGLCKIGETAAAAGLLKKMEEAG 228
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
P+ T+ LI C++++ A M KG P+ +SLI L K EA
Sbjct: 229 CQPNMVTYSTLIDSLCRDRLVNEALDIFSYMKAKGISPDIFTYTSLIQGLCKFSRWKEAS 288
Query: 121 SVYN 124
++ N
Sbjct: 289 ALLN 292
Score = 44.7 bits (104), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 27/108 (25%), Positives = 47/108 (43%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I + CR E + +AK D+ S++ C+ + ++ ++ L
Sbjct: 239 LIDSLCRDRLVNEALDIFSYMKAKGISPDIFTYTSLIQGLCKFSRWKEASALLNEMTSLN 298
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIF 108
I PD TF++L+ FCKE A + M G +P SSL++
Sbjct: 299 IMPDIVTFNVLVDTFCKEGKVSEALGVLKTMTEMGVEPNVVTYSSLMY 346
Score = 42.4 bits (98), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 27/123 (21%), Positives = 54/123 (43%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I FC+ G E + L + + D+ + +L +C+ G + + R +
Sbjct: 414 LIHGFCQLGKLREAQDLFRNMCTNGNLPDLFTYSILLDGFCKQGYLGKAFRLFRAMQSTY 473
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ P+ + IL+ CK + A + ++ +G QP +L +++I L K EAL
Sbjct: 474 LKPNLVMYTILVHAMCKSGNHKDARKLFSELFVQGLQPHVQLYTTIINGLCKEGLLDEAL 533
Query: 121 SVY 123
+
Sbjct: 534 EAF 536
Score = 42.0 bits (97), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 33/154 (21%), Positives = 67/154 (43%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ +C++ +E QL + + + V N+++ +C+ G + + R +
Sbjct: 379 LINGYCKAKRIDEAMQLFNEMIHQGLTPNNVSYNTLIHGFCQLGKLREAQDLFRNMCTNG 438
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
PD T+ IL+ FCK+ A+R M +P + + L+ + K H +A
Sbjct: 439 NLPDLFTYSILLDGFCKQGYLGKAFRLFRAMQSTYLKPNLVMYTILVHAMCKSGNHKDAR 498
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLKDA 154
+++ L L+ I++ L LL +A
Sbjct: 499 KLFSELFVQGLQPHVQLYTTIINGLCKEGLLDEA 532
Score = 39.7 bits (91), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 27/127 (21%), Positives = 57/127 (44%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ FC+ G + +L ++ Y K ++V+ ++ A C++G+ + + +L
Sbjct: 449 LLDGFCKQGYLGKAFRLFRAMQSTYLKPNLVMYTILVHAMCKSGNHKDARKLFSELFVQG 508
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ P + +I CKE + A +M G P+E + +I L + + S AL
Sbjct: 509 LQPHVQLYTTIINGLCKEGLLDEALEAFRNMEADGCPPDEISYNVIIRGLLQHKDESRAL 568
Query: 121 SVYNMLR 127
+ +R
Sbjct: 569 LLVGEMR 575
Score = 38.5 bits (88), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 22/98 (22%), Positives = 43/98 (43%)
Query: 30 VVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYMLAYRTMV 89
+V +++ C+ G+ + + + PD T++ +I CK A +
Sbjct: 163 IVTFTTLINGLCKVGEFAQAVELFDDMVAKGCQPDVYTYNTIINGLCKIGETAAAAGLLK 222
Query: 90 DMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVYNMLR 127
M G QP S+LI L + R +EAL +++ ++
Sbjct: 223 KMEEAGCQPNMVTYSTLIDSLCRDRLVNEALDIFSYMK 260
Score = 36.6 bits (83), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 30/119 (25%), Positives = 52/119 (43%), Gaps = 12/119 (10%)
Query: 29 DVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYMLAYRTM 88
++ L+ + +C+ ++ V+ K+ +L + P TF LI CK + A
Sbjct: 127 NIYTLSIFMNCFCQLQRVDLGFSVLAKVIKLGLQPTIVTFTTLINGLCKVGEFAQAVELF 186
Query: 89 VDMHRKGHQPEEELCSSLIFHL----------GKMRAHSEALSVYNMLRYSK--RSMCK 135
DM KG QP+ +++I L G ++ EA NM+ YS S+C+
Sbjct: 187 DDMVAKGCQPDVYTYNTIINGLCKIGETAAAAGLLKKMEEAGCQPNMVTYSTLIDSLCR 245
>gi|125587025|gb|EAZ27689.1| hypothetical protein OsJ_11637 [Oryza sativa Japonica Group]
Length = 650
Score = 56.6 bits (135), Expect = 3e-06, Method: Composition-based stats.
Identities = 33/122 (27%), Positives = 59/122 (48%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+++ C++G EE K + + D+ N+++ A C +E + + R++
Sbjct: 235 VVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLARQVTVKG 294
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+SPD TF+ILI CK LA R +M G P+E ++LI +L + +AL
Sbjct: 295 VSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKAL 354
Query: 121 SV 122
+
Sbjct: 355 DL 356
Score = 42.0 bits (97), Expect = 0.090, Method: Composition-based stats.
Identities = 36/158 (22%), Positives = 61/158 (38%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+A C EE LA K DV N ++ A C+ GD + + ++
Sbjct: 270 LIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSG 329
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+PD T++ LI C A + DM G +++I L K EA
Sbjct: 330 CTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAE 389
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLKDAYIVV 158
V++ + S ++ L K + DA+ ++
Sbjct: 390 EVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAFELI 427
Score = 41.6 bits (96), Expect = 0.12, Method: Composition-based stats.
Identities = 25/123 (20%), Positives = 55/123 (44%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C+ ++ +L ++ + + + NS+L YC+ GD++ ++ +
Sbjct: 410 LIDGLCKDKKIDDAFELINQMISEGLQPNNITYNSILTHYCKQGDIKKAADILETMTANG 469
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
D T+ LI CK +A + + M KG +P + + ++ L + +AL
Sbjct: 470 FEVDVVTYGTLINGLCKAGRTQVALKVLRGMRIKGMRPTPKAYNPVLQSLFRRNNIRDAL 529
Query: 121 SVY 123
S++
Sbjct: 530 SLF 532
Score = 40.4 bits (93), Expect = 0.22, Method: Composition-based stats.
Identities = 28/112 (25%), Positives = 48/112 (42%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C G + L D E+ + N+++ C+ +E V ++D
Sbjct: 340 LIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQG 399
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGK 112
IS + TF+ LI CK+K A+ + M +G QP +S++ H K
Sbjct: 400 ISRNAITFNTLIDGLCKDKKIDDAFELINQMISEGLQPNNITYNSILTHYCK 451
Score = 38.1 bits (87), Expect = 1.1, Method: Composition-based stats.
Identities = 31/123 (25%), Positives = 53/123 (43%), Gaps = 10/123 (8%)
Query: 29 DVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYMLAYRTM 88
D V+ N +L M+ + V ++ I PD TF+ L+K C+ A +
Sbjct: 53 DTVVYNHLLNVLVEGSKMKLLESVYSEMGARGIKPDVVTFNTLMKALCRAHQVRTAVLML 112
Query: 89 VDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVYNMLRYSKRSM---CKALHEKILHIL 145
+M +G P+E ++L M+ E S+ LR R + C A + ++L
Sbjct: 113 EEMSSRGVAPDETTFTTL------MQGFVEEGSIEAALRVKARMLEMGCSATKVTV-NVL 165
Query: 146 ISG 148
I+G
Sbjct: 166 ING 168
Score = 37.7 bits (86), Expect = 1.5, Method: Composition-based stats.
Identities = 19/69 (27%), Positives = 34/69 (49%)
Query: 27 KYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYMLAYR 86
K DVV N+++ A CR + + + ++ ++ ++PD TF L++ F +E A R
Sbjct: 86 KPDVVTFNTLMKALCRAHQVRTAVLMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALR 145
Query: 87 TMVDMHRKG 95
M G
Sbjct: 146 VKARMLEMG 154
>gi|255585033|ref|XP_002533225.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223526957|gb|EEF29157.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 605
Score = 56.6 bits (135), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 49/93 (52%), Gaps = 5/93 (5%)
Query: 8 SGCFEETKQLAG-----DFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAIS 62
+GCFE + L G + E K K + V N ++ Y + G M++ + +RK++E S
Sbjct: 196 NGCFECSSSLKGFELIDEMEGKGVKPNAVTYNVVVKWYVKEGKMDNAGNELRKMEESGFS 255
Query: 63 PDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKG 95
PD TF+ L +CK A+R M +M RKG
Sbjct: 256 PDCVTFNTLSNGYCKAGRLSEAFRMMDEMSRKG 288
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 36/154 (23%), Positives = 61/154 (39%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
MI CRSG +++ + D N+++ YCR G ++ H K+ + +
Sbjct: 365 MIGGLCRSGKTDQSIDKCNELLESGLVPDQTTYNTIILGYCREGQVDKAFHFRNKMVKKS 424
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
PD T +IL++ C E M A + KG + +++I L + EA
Sbjct: 425 FKPDLFTCNILVRGLCTEGMLDKALKLFKTWISKGKAIDAVTFNTIISGLCEEGRFEEAF 484
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLKDA 154
+ + K H IL L +K+A
Sbjct: 485 DLLAEMEEKKLGPDCYTHNAILSALADAGRMKEA 518
Score = 40.0 bits (92), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 27/119 (22%), Positives = 54/119 (45%), Gaps = 4/119 (3%)
Query: 30 VVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYMLAYRTMV 89
++ +M+ CR+G + + +L E + PD T++ +I +C+E A+
Sbjct: 359 IITYGTMIGGLCRSGKTDQSIDKCNELLESGLVPDQTTYNTIILGYCREGQVDKAFHFRN 418
Query: 90 DMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVYNMLRYSKRSMCKALHEKILHILISG 148
M +K +P+ C+ L+ L +AL ++ + S KA+ + +ISG
Sbjct: 419 KMVKKSFKPDLFTCNILVRGLCTEGMLDKALKLFK----TWISKGKAIDAVTFNTIISG 473
Score = 37.4 bits (85), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 24/92 (26%), Positives = 40/92 (43%)
Query: 29 DVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYMLAYRTM 88
D V N++L C+ G + ++ + + P+ NTF+IL+ +CK A +
Sbjct: 82 DNVSYNTILDVLCKKGKLNEARDLLLDMKNNGLFPNRNTFNILVSGYCKLGWLKEAAEVI 141
Query: 89 VDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
M R P+ ++LI L K EA
Sbjct: 142 DIMARNNVLPDVRTYTTLIGGLCKDGKIDEAF 173
>gi|125590524|gb|EAZ30874.1| hypothetical protein OsJ_14948 [Oryza sativa Japonica Group]
Length = 414
Score = 56.6 bits (135), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 40/160 (25%), Positives = 71/160 (44%), Gaps = 1/160 (0%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+IS +C++G E+ + D A + V N ++ Y + GD+ S + V +++ L
Sbjct: 159 VISGYCKAGKLEDAMAVYNDMVASGIMPNTVTYNVLINGYGKVGDLGSAVEVYQQMTRLR 218
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
PD TF LI +C+ A R DM + QP S +I L K EA+
Sbjct: 219 CPPDVVTFSSLIDGYCRCGQLDDALRIWSDMAQHRIQPNVYTFSIIIHSLCKQNRSDEAI 278
Query: 121 SVYNMLRYSKRSMCKA-LHEKILHILISGKLLKDAYIVVK 159
+ N L +A ++ ++ +L + +A ++ K
Sbjct: 279 GLLNELNLRPDIAPQAFIYNPVIDVLCKCGKVDEANLIRK 318
Score = 43.1 bits (100), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 24/97 (24%), Positives = 45/97 (46%), Gaps = 1/97 (1%)
Query: 29 DVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYMLAYRTM 88
DV N ++ CR G ++ + ++ +++E SPD T +IL+ C+ + +
Sbjct: 81 DVWSFNVVIKGVCRVGQVQKALELVERMNEFGCSPDTVTHNILVDGLCRTNEVSRGHEVL 140
Query: 89 VDMHRKGH-QPEEELCSSLIFHLGKMRAHSEALSVYN 124
+ R G P +S+I K +A++VYN
Sbjct: 141 RRLQRDGVCMPNVVTFTSVISGYCKAGKLEDAMAVYN 177
Score = 39.3 bits (90), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 32/127 (25%), Positives = 50/127 (39%), Gaps = 1/127 (0%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I CR G ++ +L D V N ++ CRT ++ V+R+L
Sbjct: 88 VIKGVCRVGQVQKALELVERMNEFGCSPDTVTHNILVDGLCRTNEVSRGHEVLRRLQRDG 147
Query: 61 IS-PDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEA 119
+ P+ TF +I +CK A DM G P + LI GK+ A
Sbjct: 148 VCMPNVVTFTSVISGYCKAGKLEDAMAVYNDMVASGIMPNTVTYNVLINGYGKVGDLGSA 207
Query: 120 LSVYNML 126
+ VY +
Sbjct: 208 VEVYQQM 214
>gi|297741319|emb|CBI32450.3| unnamed protein product [Vitis vinifera]
Length = 851
Score = 56.2 bits (134), Expect = 4e-06, Method: Composition-based stats.
Identities = 30/127 (23%), Positives = 61/127 (48%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I A+C+ G +E L +K + +++ N ++ CR G M+ ++ ++
Sbjct: 51 LIDAYCKMGRIDEAFGLLKSMSSKGMQPNLISYNVIINGLCREGSMKEAWEILEEMGYKG 110
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+PD T++ L+ +CKE + A +M R G P ++LI + K R + A+
Sbjct: 111 FTPDEVTYNTLLNGYCKEGNFHQALVIHAEMVRNGVSPSVVTYTALINSMCKARNLNRAM 170
Query: 121 SVYNMLR 127
++ +R
Sbjct: 171 EFFDQMR 177
Score = 53.1 bits (126), Expect = 4e-05, Method: Composition-based stats.
Identities = 32/119 (26%), Positives = 57/119 (47%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I F R G E ++ + VV N+ + +C ME + V++++ E
Sbjct: 191 LIDGFSRQGLLNEAYRILNEMTESGFSPSVVTYNAFIHGHCVLERMEEALGVVQEMVEKG 250
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEA 119
++PD ++ +I FC++ A++ +M KG P+ SSLI L +MR +EA
Sbjct: 251 LAPDVVSYSTIISGFCRKGELDRAFQMKQEMVEKGVSPDAVTYSSLIQGLCEMRRLTEA 309
Score = 51.6 bits (122), Expect = 1e-04, Method: Composition-based stats.
Identities = 35/148 (23%), Positives = 70/148 (47%), Gaps = 12/148 (8%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I FC G ++ G+ E +VV N+++ AYC+ G ++ +++ +
Sbjct: 16 LIRGFCSVGELQKGLGCFGEMERNGCLPNVVTYNTLIDAYCKMGRIDEAFGLLKSMSSKG 75
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ P+ +++++I C+E A+ + +M KG P+E ++L+ K +AL
Sbjct: 76 MQPNLISYNVIINGLCREGSMKEAWEILEEMGYKGFTPDEVTYNTLLNGYCKEGNFHQAL 135
Query: 121 SVY-NMLR---------YSK--RSMCKA 136
++ M+R Y+ SMCKA
Sbjct: 136 VIHAEMVRNGVSPSVVTYTALINSMCKA 163
Score = 51.2 bits (121), Expect = 2e-04, Method: Composition-based stats.
Identities = 33/143 (23%), Positives = 60/143 (41%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ CR G +E ++ + K D V N++L YC+ G+ + + ++
Sbjct: 86 IINGLCREGSMKEAWEILEEMGYKGFTPDEVTYNTLLNGYCKEGNFHQALVIHAEMVRNG 145
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+SP T+ LI CK + A M +G +P E ++LI + +EA
Sbjct: 146 VSPSVVTYTALINSMCKARNLNRAMEFFDQMRIRGLRPNERTYTTLIDGFSRQGLLNEAY 205
Query: 121 SVYNMLRYSKRSMCKALHEKILH 143
+ N + S S + +H
Sbjct: 206 RILNEMTESGFSPSVVTYNAFIH 228
Score = 43.9 bits (102), Expect = 0.022, Method: Composition-based stats.
Identities = 33/130 (25%), Positives = 54/130 (41%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+IS FCR G + Q+ + K D V +S++ C + + +++ ++
Sbjct: 261 IISGFCRKGELDRAFQMKQEMVEKGVSPDAVTYSSLIQGLCEMRRLTEACDLSQEMLDMG 320
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ PD T+ LI +C E A +M KG P+ S LI L K EA
Sbjct: 321 LPPDEFTYTTLINAYCVEGDLNKALHLHDEMIHKGFLPDAVTYSVLINGLNKQARTREAK 380
Query: 121 SVYNMLRYSK 130
+ L Y +
Sbjct: 381 RLLFKLIYEE 390
Score = 41.2 bits (95), Expect = 0.13, Method: Composition-based stats.
Identities = 21/79 (26%), Positives = 42/79 (53%)
Query: 29 DVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYMLAYRTM 88
DVV ++++ +CR G+++ + +++ E +SPD T+ LI+ C+ + A
Sbjct: 254 DVVSYSTIISGFCRKGELDRAFQMKQEMVEKGVSPDAVTYSSLIQGLCEMRRLTEACDLS 313
Query: 89 VDMHRKGHQPEEELCSSLI 107
+M G P+E ++LI
Sbjct: 314 QEMLDMGLPPDEFTYTTLI 332
Score = 38.5 bits (88), Expect = 0.83, Method: Composition-based stats.
Identities = 23/122 (18%), Positives = 51/122 (41%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+++ +C+ G F + + + VV +++ + C+ ++ M ++
Sbjct: 121 LLNGYCKEGNFHQALVIHAEMVRNGVSPSVVTYTALINSMCKARNLNRAMEFFDQMRIRG 180
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ P+ T+ LI F ++ + AYR + +M G P ++ I + EAL
Sbjct: 181 LRPNERTYTTLIDGFSRQGLLNEAYRILNEMTESGFSPSVVTYNAFIHGHCVLERMEEAL 240
Query: 121 SV 122
V
Sbjct: 241 GV 242
Score = 35.4 bits (80), Expect = 7.9, Method: Composition-based stats.
Identities = 30/129 (23%), Positives = 48/129 (37%), Gaps = 3/129 (2%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I FC G E ++ + K + N ++ +CR G++ ++ +++
Sbjct: 416 LIKGFCMKGLMHEADRVFESMVERNHKPGEAVYNVIIHGHCRGGNLPKAFNLYKEMIHSG 475
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLI---FHLGKMRAHS 117
P T LIK KE M + D R E EL L+ G M A
Sbjct: 476 FVPHTVTVITLIKALFKEGMNEEMSEVIGDTLRSCRLNEAELAKVLVEINHKEGNMEAVL 535
Query: 118 EALSVYNML 126
+YN L
Sbjct: 536 NVSRLYNKL 544
>gi|302816356|ref|XP_002989857.1| hypothetical protein SELMODRAFT_45144 [Selaginella moellendorffii]
gi|300142423|gb|EFJ09124.1| hypothetical protein SELMODRAFT_45144 [Selaginella moellendorffii]
Length = 394
Score = 56.2 bits (134), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 42/161 (26%), Positives = 71/161 (44%), Gaps = 5/161 (3%)
Query: 1 MISAFCRSGCFEETKQLAGDFE-AKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDEL 59
+I C+ EE ++L FE A D DV++ S + C+ G ++ V K+ E
Sbjct: 160 LIDGLCKHDRHEEAREL---FEMAAGDVQDVIVYTSFISGLCKAGKLDEAKAVHVKMIEA 216
Query: 60 AISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEA 119
+PD +++++I CK+ A M + P +C+ L+ L K R EA
Sbjct: 217 GCAPDPVSYNVIIYSLCKDNRVSEAKELMDQAMERKCMPGVPVCTVLVDGLCKSRRVEEA 276
Query: 120 LSVYN-MLRYSKRSMCKALHEKILHILISGKLLKDAYIVVK 159
+ ML R+ + ++ L L DAYIV++
Sbjct: 277 CVILERMLEAGDRAPSVVTYSAVIDGLCKADRLDDAYIVLQ 317
>gi|91806021|gb|ABE65739.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 450
Score = 56.2 bits (134), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 37/155 (23%), Positives = 73/155 (47%), Gaps = 4/155 (2%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
MI FC+ F++ K + D A D VV N+++ YCR ++ M ++R++
Sbjct: 191 MIYGFCKHNRFDDAKHMF-DLMASPD---VVTFNTIIDVYCRAKRVDEGMQLLREISRRG 246
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ + T++ LI FC+ A +M G P+ C+ L++ + EAL
Sbjct: 247 LVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEAL 306
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLKDAY 155
++ +++ SK + + I+H + G + +A+
Sbjct: 307 ELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAW 341
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 44/99 (44%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ C G E L K DVV +++ C+ GD +S ++++ K++E
Sbjct: 16 LINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETH 75
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPE 99
I PD + +I CK+ + A +M KG P
Sbjct: 76 IKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPN 114
Score = 40.4 bits (93), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 24/107 (22%), Positives = 51/107 (47%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+++ C+ G + L E + K DVV+ ++++ C+ G ++ ++ E
Sbjct: 51 IVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKG 110
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLI 107
I+P+ T++ +I FC + A R + DM + P+ ++LI
Sbjct: 111 IAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALI 157
Score = 38.5 bits (88), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 23/107 (21%), Positives = 44/107 (41%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ FC + EE +L + D V N ++ C+ ++ + L
Sbjct: 292 LLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHG 351
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLI 107
+ PD T++++I FC + A M GH+P+ ++LI
Sbjct: 352 VEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLI 398
Score = 36.6 bits (83), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 28/126 (22%), Positives = 54/126 (42%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C+ G + + L + K +V N M+ +C G ++R + E
Sbjct: 86 IIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIERE 145
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
I+PD TF+ LI KE A + +M + P+ +S+I+ K +A
Sbjct: 146 INPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAK 205
Query: 121 SVYNML 126
+++++
Sbjct: 206 HMFDLM 211
>gi|326500244|dbj|BAK06211.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 600
Score = 56.2 bits (134), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 30/122 (24%), Positives = 62/122 (50%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ +C++G +E ++ + + + DVV+ +++ + CR G ++ VM + E
Sbjct: 170 LLHGYCKTGRWESVGKVFEEMSGRGIEPDVVMYTALIDSLCRHGKVKKAARVMDMMTERG 229
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ P+ T+++LI CKE A +M KG QP+ ++LI L + EA+
Sbjct: 230 LEPNVVTYNVLINSMCKEGSVREALDLRKNMSEKGVQPDVVTYNTLITGLSSVLEMDEAM 289
Query: 121 SV 122
++
Sbjct: 290 AL 291
Score = 43.9 bits (102), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 32/122 (26%), Positives = 53/122 (43%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C + + +L + + +VV+ + +L YC+TG ESV V ++
Sbjct: 135 LIRGLCDAADVDTAVELLNEMCESGIEPNVVVYSCLLHGYCKTGRWESVGKVFEEMSGRG 194
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
I PD + LI C+ A R M M +G +P + LI + K + EAL
Sbjct: 195 IEPDVVMYTALIDSLCRHGKVKKAARVMDMMTERGLEPNVVTYNVLINSMCKEGSVREAL 254
Query: 121 SV 122
+
Sbjct: 255 DL 256
Score = 40.4 bits (93), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 23/99 (23%), Positives = 44/99 (44%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C+ G + Q+ + ++V N ++ R ++ M +M ++
Sbjct: 312 VIHGLCKIGWMRQALQVRAMMAENGCRCNLVAFNLLIGGLLRVHKVKKAMELMDEMASSG 371
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPE 99
+ PD T+ ILI FCK + A + +M +G +PE
Sbjct: 372 LQPDSFTYSILINGFCKMRQVERAESYLSEMRHQGMEPE 410
Score = 38.9 bits (89), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 29/121 (23%), Positives = 53/121 (43%), Gaps = 10/121 (8%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKL--DE 58
+I++ C+ G E L + K + DVV N+++ +M+ M ++ ++ E
Sbjct: 240 LINSMCKEGSVREALDLRKNMSEKGVQPDVVTYNTLITGLSSVLEMDEAMALLEEMMQGE 299
Query: 59 LAISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHL---GKMRA 115
+ PD TF+ +I CK A + M G + C+ + F+L G +R
Sbjct: 300 TRVRPDLMTFNSVIHGLCKIGWMRQALQVRAMMAENGCR-----CNLVAFNLLIGGLLRV 354
Query: 116 H 116
H
Sbjct: 355 H 355
Score = 36.6 bits (83), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 25/121 (20%), Positives = 58/121 (47%), Gaps = 12/121 (9%)
Query: 27 KYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYMLAYR 86
+ DVV +++ C D+++ + ++ ++ E I P+ + L+ +CK + +
Sbjct: 126 RPDVVTYGTLIRGLCDAADVDTAVELLNEMCESGIEPNVVVYSCLLHGYCKTGRWESVGK 185
Query: 87 TMVDMHRKGHQPEEELCSSLIFHL---GKMRAHSEALSVY-------NMLRYSK--RSMC 134
+M +G +P+ + ++LI L GK++ + + + N++ Y+ SMC
Sbjct: 186 VFEEMSGRGIEPDVVMYTALIDSLCRHGKVKKAARVMDMMTERGLEPNVVTYNVLINSMC 245
Query: 135 K 135
K
Sbjct: 246 K 246
>gi|357494043|ref|XP_003617310.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355518645|gb|AET00269.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 716
Score = 56.2 bits (134), Expect = 4e-06, Method: Composition-based stats.
Identities = 33/115 (28%), Positives = 55/115 (47%), Gaps = 2/115 (1%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I +C+ G + L + K DVV N+++ +C+ G+ME + +
Sbjct: 475 LIHGYCKDGNMTKALSLFETMTLRSLKPDVVTYNTLMDGFCKVGEMEKAKELWYDMISRE 534
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRA 115
I P Y +F ILI FC + A+R +M KG +P C+++I G +RA
Sbjct: 535 IFPSYISFSILINGFCSLGLVSEAFRLWDEMKEKGIKPTLVTCNTII--KGYLRA 587
Score = 46.2 bits (108), Expect = 0.004, Method: Composition-based stats.
Identities = 31/124 (25%), Positives = 54/124 (43%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
M++A C+ G + + E K D+V N+++ AYCR G + ++ +
Sbjct: 230 MVNALCKDGKLDNVGVYLSEMEEKGVYADLVTYNTLVNAYCRRGLVSEAFGLVDCMAGKG 289
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ P T++ LI CKE Y A R + +M G P + ++ + EA
Sbjct: 290 LKPGLFTYNALINGLCKEGSYERAKRVLDEMLGVGLCPNAATFNPMLVESCRKEDVWEAE 349
Query: 121 SVYN 124
V+N
Sbjct: 350 RVFN 353
Score = 44.3 bits (103), Expect = 0.016, Method: Composition-based stats.
Identities = 25/98 (25%), Positives = 47/98 (47%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ FC G E +L + + K K +V N+++ Y R G++ + +
Sbjct: 545 LINGFCSLGLVSEAFRLWDEMKEKGIKPTLVTCNTIIKGYLRAGNLSKANDFLNTMISEG 604
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQP 98
+ PD T++ LI F KE+ + A+ + +M +G P
Sbjct: 605 VPPDCITYNTLINSFVKEENFDRAFFLINNMEERGLLP 642
Score = 42.0 bits (97), Expect = 0.076, Method: Composition-based stats.
Identities = 24/102 (23%), Positives = 52/102 (50%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I++F + F+ L + E + ++V N++L + R G M+ V+ K+ +
Sbjct: 615 LINSFVKEENFDRAFFLINNMEERGLLPNLVTYNAILGGFSRHGRMQEAEMVLHKMIDKG 674
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEEL 102
I+PD +T+ LI + + A+R +M ++G P+++
Sbjct: 675 INPDKSTYTSLINGYVSKDNMKEAFRVHDEMLQRGFVPDDKF 716
Score = 39.7 bits (91), Expect = 0.39, Method: Composition-based stats.
Identities = 26/127 (20%), Positives = 58/127 (45%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+++A+CR G E L K K + N+++ C+ G E V+ ++ +
Sbjct: 265 LVNAYCRRGLVSEAFGLVDCMAGKGLKPGLFTYNALINGLCKEGSYERAKRVLDEMLGVG 324
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ P+ TF+ ++ C+++ A R +M ++G P+ SS++ + AL
Sbjct: 325 LCPNAATFNPMLVESCRKEDVWEAERVFNEMLQRGVVPDLISFSSIVGVFSRNGELGRAL 384
Query: 121 SVYNMLR 127
+ + ++
Sbjct: 385 AYFEKMK 391
Score = 39.3 bits (90), Expect = 0.57, Method: Composition-based stats.
Identities = 28/124 (22%), Positives = 60/124 (48%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ A + G + ++ DF + +V LN M+ A C+ G +++V + +++E
Sbjct: 195 LLGAIVKVGWVDLAWKVYEDFVKSGNIVNVYTLNIMVNALCKDGKLDNVGVYLSEMEEKG 254
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ D T++ L+ +C+ + A+ + M KG +P ++LI L K ++ A
Sbjct: 255 VYADLVTYNTLVNAYCRRGLVSEAFGLVDCMAGKGLKPGLFTYNALINGLCKEGSYERAK 314
Query: 121 SVYN 124
V +
Sbjct: 315 RVLD 318
Score = 37.7 bits (86), Expect = 1.5, Method: Composition-based stats.
Identities = 26/127 (20%), Positives = 54/127 (42%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+++ CR ++ +L + + D L +++ YC+ G+M + + + +
Sbjct: 440 LLNGLCRGKMLDDADELFKEMVERGVFPDFYTLTTLIHGYCKDGNMTKALSLFETMTLRS 499
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ PD T++ L+ FCK A DM + P S LI + SEA
Sbjct: 500 LKPDVVTYNTLMDGFCKVGEMEKAKELWYDMISREIFPSYISFSILINGFCSLGLVSEAF 559
Query: 121 SVYNMLR 127
+++ ++
Sbjct: 560 RLWDEMK 566
Score = 37.7 bits (86), Expect = 1.8, Method: Composition-based stats.
Identities = 34/154 (22%), Positives = 61/154 (39%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ C+ G +E K++ + + N ML CR D+ V ++ +
Sbjct: 300 LINGLCKEGSYERAKRVLDEMLGVGLCPNAATFNPMLVESCRKEDVWEAERVFNEMLQRG 359
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ PD +F ++ F + A M G P+ + + LI + S AL
Sbjct: 360 VVPDLISFSSIVGVFSRNGELGRALAYFEKMKGVGLVPDTVIYTILINGYCRNDDVSGAL 419
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLKDA 154
+ N + M + +L+ L GK+L DA
Sbjct: 420 KMRNEMVERGCVMDVVTYNTLLNGLCRGKMLDDA 453
Score = 35.8 bits (81), Expect = 6.5, Method: Composition-based stats.
Identities = 23/98 (23%), Positives = 45/98 (45%)
Query: 29 DVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYMLAYRTM 88
D V+ ++ YCR D+ + + ++ E D T++ L+ C+ KM A
Sbjct: 398 DTVIYTILINGYCRNDDVSGALKMRNEMVERGCVMDVVTYNTLLNGLCRGKMLDDADELF 457
Query: 89 VDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVYNML 126
+M +G P+ ++LI K ++ALS++ +
Sbjct: 458 KEMVERGVFPDFYTLTTLIHGYCKDGNMTKALSLFETM 495
>gi|356552005|ref|XP_003544362.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At1g09680-like [Glycine max]
Length = 509
Score = 56.2 bits (134), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 27/101 (26%), Positives = 51/101 (50%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ C+ G +E ++L + A + D + +++ C+ GDMES + + R++ E
Sbjct: 288 LINGLCKVGDLKEARRLVNEMSASGLRPDRITFTTLIDGCCKYGDMESALEIKRRMVEEG 347
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEE 101
I D F +LI C++ A R + DM G +P++
Sbjct: 348 IELDDVAFTVLISGLCRDGRVHDAERMLRDMLSAGFKPDDP 388
Score = 45.1 bits (105), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 33/129 (25%), Positives = 61/129 (47%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+IS C++G EE +L G E++ DV ++++ C+ G ++ + ++
Sbjct: 183 LISGCCKAGAVEEGFRLKGVMESERVCPDVFTFSALINGLCKEGRLDEGSLLFDEMCGKG 242
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ P+ TF +LI CK LA + M +G +P+ ++LI L K+ EA
Sbjct: 243 LVPNGVTFTVLIDGQCKGGKVDLALKNFQMMLAQGVRPDLVTYNALINGLCKVGDLKEAR 302
Query: 121 SVYNMLRYS 129
+ N + S
Sbjct: 303 RLVNEMSAS 311
Score = 36.6 bits (83), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 18/78 (23%), Positives = 35/78 (44%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ FC+ G + + + + + VV N+++ C+ G +E + ++
Sbjct: 148 LMHGFCKVGGVGSARLVFDEIPKRGLRPTVVSFNTLISGCCKAGAVEEGFRLKGVMESER 207
Query: 61 ISPDYNTFHILIKYFCKE 78
+ PD TF LI CKE
Sbjct: 208 VCPDVFTFSALINGLCKE 225
>gi|18407969|ref|NP_564822.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806279|sp|Q9SH60.2|PP103_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g64100
gi|332196071|gb|AEE34192.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 666
Score = 56.2 bits (134), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 37/155 (23%), Positives = 73/155 (47%), Gaps = 4/155 (2%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
MI FC+ F++ K + D A D VV N+++ YCR ++ M ++R++
Sbjct: 407 MIYGFCKHNRFDDAKHMF-DLMASPD---VVTFNTIIDVYCRAKRVDEGMQLLREISRRG 462
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ + T++ LI FC+ A +M G P+ C+ L++ + EAL
Sbjct: 463 LVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEAL 522
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLKDAY 155
++ +++ SK + + I+H + G + +A+
Sbjct: 523 ELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAW 557
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 44/99 (44%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ C G E L K DVV +++ C+ GD +S ++++ K++E
Sbjct: 232 LINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETH 291
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPE 99
I PD + +I CK+ + A +M KG P
Sbjct: 292 IKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPN 330
Score = 40.4 bits (93), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 24/107 (22%), Positives = 51/107 (47%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+++ C+ G + L E + K DVV+ ++++ C+ G ++ ++ E
Sbjct: 267 IVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKG 326
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLI 107
I+P+ T++ +I FC + A R + DM + P+ ++LI
Sbjct: 327 IAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALI 373
Score = 38.5 bits (88), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 23/107 (21%), Positives = 44/107 (41%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ FC + EE +L + D V N ++ C+ ++ + L
Sbjct: 508 LLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHG 567
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLI 107
+ PD T++++I FC + A M GH+P+ ++LI
Sbjct: 568 VEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLI 614
Score = 37.0 bits (84), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 28/126 (22%), Positives = 54/126 (42%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C+ G + + L + K +V N M+ +C G ++R + E
Sbjct: 302 IIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIERE 361
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
I+PD TF+ LI KE A + +M + P+ +S+I+ K +A
Sbjct: 362 INPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAK 421
Query: 121 SVYNML 126
+++++
Sbjct: 422 HMFDLM 427
>gi|6692112|gb|AAF24577.1|AC007764_19 F22C12.14 [Arabidopsis thaliana]
Length = 661
Score = 56.2 bits (134), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 37/155 (23%), Positives = 73/155 (47%), Gaps = 4/155 (2%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
MI FC+ F++ K + D A D VV N+++ YCR ++ M ++R++
Sbjct: 402 MIYGFCKHNRFDDAKHMF-DLMASPD---VVTFNTIIDVYCRAKRVDEGMQLLREISRRG 457
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ + T++ LI FC+ A +M G P+ C+ L++ + EAL
Sbjct: 458 LVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEAL 517
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLKDAY 155
++ +++ SK + + I+H + G + +A+
Sbjct: 518 ELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAW 552
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 44/99 (44%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ C G E L K DVV +++ C+ GD +S ++++ K++E
Sbjct: 227 LINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETH 286
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPE 99
I PD + +I CK+ + A +M KG P
Sbjct: 287 IKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPN 325
Score = 40.4 bits (93), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 24/107 (22%), Positives = 51/107 (47%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+++ C+ G + L E + K DVV+ ++++ C+ G ++ ++ E
Sbjct: 262 IVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKG 321
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLI 107
I+P+ T++ +I FC + A R + DM + P+ ++LI
Sbjct: 322 IAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALI 368
Score = 38.5 bits (88), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 23/107 (21%), Positives = 44/107 (41%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ FC + EE +L + D V N ++ C+ ++ + L
Sbjct: 503 LLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHG 562
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLI 107
+ PD T++++I FC + A M GH+P+ ++LI
Sbjct: 563 VEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLI 609
Score = 37.0 bits (84), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 28/126 (22%), Positives = 54/126 (42%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C+ G + + L + K +V N M+ +C G ++R + E
Sbjct: 297 IIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIERE 356
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
I+PD TF+ LI KE A + +M + P+ +S+I+ K +A
Sbjct: 357 INPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAK 416
Query: 121 SVYNML 126
+++++
Sbjct: 417 HMFDLM 422
>gi|145326646|ref|NP_001077770.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|332196072|gb|AEE34193.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 806
Score = 56.2 bits (134), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 37/155 (23%), Positives = 73/155 (47%), Gaps = 4/155 (2%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
MI FC+ F++ K + D A D VV N+++ YCR ++ M ++R++
Sbjct: 407 MIYGFCKHNRFDDAKHMF-DLMASPD---VVTFNTIIDVYCRAKRVDEGMQLLREISRRG 462
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ + T++ LI FC+ A +M G P+ C+ L++ + EAL
Sbjct: 463 LVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEAL 522
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLKDAY 155
++ +++ SK + + I+H + G + +A+
Sbjct: 523 ELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAW 557
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 26/98 (26%), Positives = 44/98 (44%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ C G E L K DVV +++ C+ GD +S ++++ K++E
Sbjct: 232 LINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETH 291
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQP 98
I PD + +I CK+ + A +M KG P
Sbjct: 292 IKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAP 329
Score = 40.4 bits (93), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 24/107 (22%), Positives = 51/107 (47%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+++ C+ G + L E + K DVV+ ++++ C+ G ++ ++ E
Sbjct: 267 IVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKG 326
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLI 107
I+P+ T++ +I FC + A R + DM + P+ ++LI
Sbjct: 327 IAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALI 373
Score = 38.9 bits (89), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 23/107 (21%), Positives = 44/107 (41%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ FC + EE +L + D V N ++ C+ ++ + L
Sbjct: 508 LLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHG 567
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLI 107
+ PD T++++I FC + A M GH+P+ ++LI
Sbjct: 568 VEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLI 614
Score = 37.4 bits (85), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 28/126 (22%), Positives = 54/126 (42%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C+ G + + L + K +V N M+ +C G ++R + E
Sbjct: 302 IIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIERE 361
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
I+PD TF+ LI KE A + +M + P+ +S+I+ K +A
Sbjct: 362 INPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAK 421
Query: 121 SVYNML 126
+++++
Sbjct: 422 HMFDLM 427
>gi|413952776|gb|AFW85425.1| chloroplast RNA splicing4 [Zea mays]
Length = 1435
Score = 56.2 bits (134), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 31/144 (21%), Positives = 67/144 (46%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
MIS C F + + + + E K D+ +LN++L Y G+ + V R + E
Sbjct: 891 MISLLCHHNRFRDVELMIAEMEGAGFKPDLAILNALLNMYTAAGNFDRTTQVYRSILEAG 950
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ PD +T++ LI +C+ + + +M ++G P+ + SL+ K +A
Sbjct: 951 LEPDEDTYNTLIVMYCRSFRPEEGFTLLNEMGKRGLTPKLQSYKSLLAASAKAELREQAD 1010
Query: 121 SVYNMLRYSKRSMCKALHEKILHI 144
++ +R + ++++ ++ I
Sbjct: 1011 QIFEEMRSKSYQLNRSIYHMMMKI 1034
Score = 42.0 bits (97), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 33/122 (27%), Positives = 56/122 (45%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
M+S R G EE ++L + K D + NS+L A+ + G+++ V H +L +
Sbjct: 334 MVSVHGRCGKAEEAERLFRELVEKGFMPDAITYNSLLYAFAKEGNVDKVEHTCEQLVKAG 393
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ T++ +I + K LA +M G P+ + +I LGKM +EA
Sbjct: 394 FKKNEITYNTMIHMYGKMGRLDLAVGLYDEMRAMGCTPDAVTYTVMIDSLGKMNRIAEAG 453
Query: 121 SV 122
V
Sbjct: 454 KV 455
Score = 41.6 bits (96), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 57/127 (44%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+ISA +S E+ + D A + D+ N+M+ + R G E + R+L E
Sbjct: 299 LISACSQSSNLEDAVTVFEDMIASECRPDLWTYNAMVSVHGRCGKAEEAERLFRELVEKG 358
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
PD T++ L+ F KE T + + G + E +++I GKM A+
Sbjct: 359 FMPDAITYNSLLYAFAKEGNVDKVEHTCEQLVKAGFKKNEITYNTMIHMYGKMGRLDLAV 418
Query: 121 SVYNMLR 127
+Y+ +R
Sbjct: 419 GLYDEMR 425
>gi|359475386|ref|XP_003631674.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g39710-like [Vitis vinifera]
Length = 762
Score = 56.2 bits (134), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 39/163 (23%), Positives = 76/163 (46%), Gaps = 8/163 (4%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I A+C+ G +E L +K + +++ N ++ CR G M+ ++ ++
Sbjct: 255 LIDAYCKMGRIDEAFGLLKSMSSKGMQPNLISYNVIINGLCREGSMKEAWEILEEMGYKG 314
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+PD T++ L+ +CKE + A +M R G P ++LI + K R + A+
Sbjct: 315 FTPDEVTYNTLLNGYCKEGNFHQALVIHAEMVRNGVSPSVVTYTALINSMCKARNLNRAM 374
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISG----KLLKDAYIVVK 159
++ +R R + +E+ LI G LL +AY ++
Sbjct: 375 EFFDQMRI--RGLRP--NERTYTTLIDGFSRQGLLNEAYRILN 413
Score = 52.4 bits (124), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 32/119 (26%), Positives = 57/119 (47%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I F R G E ++ + VV N+ + +C ME + V++++ E
Sbjct: 395 LIDGFSRQGLLNEAYRILNEMTESGFSPSVVTYNAFIHGHCVLERMEEALGVVQEMVEKG 454
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEA 119
++PD ++ +I FC++ A++ +M KG P+ SSLI L +MR +EA
Sbjct: 455 LAPDVVSYSTIISGFCRKGELDRAFQMKQEMVEKGVSPDAVTYSSLIQGLCEMRRLTEA 513
Score = 52.0 bits (123), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 33/143 (23%), Positives = 60/143 (41%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ CR G +E ++ + K D V N++L YC+ G+ + + ++
Sbjct: 290 IINGLCREGSMKEAWEILEEMGYKGFTPDEVTYNTLLNGYCKEGNFHQALVIHAEMVRNG 349
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+SP T+ LI CK + A M +G +P E ++LI + +EA
Sbjct: 350 VSPSVVTYTALINSMCKARNLNRAMEFFDQMRIRGLRPNERTYTTLIDGFSRQGLLNEAY 409
Query: 121 SVYNMLRYSKRSMCKALHEKILH 143
+ N + S S + +H
Sbjct: 410 RILNEMTESGFSPSVVTYNAFIH 432
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/107 (22%), Positives = 54/107 (50%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I FC G ++ G+ E +VV N+++ AYC+ G ++ +++ +
Sbjct: 220 LIRGFCSVGELQKGLGCFGEMERNGCLPNVVTYNTLIDAYCKMGRIDEAFGLLKSMSSKG 279
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLI 107
+ P+ +++++I C+E A+ + +M KG P+E ++L+
Sbjct: 280 MQPNLISYNVIINGLCREGSMKEAWEILEEMGYKGFTPDEVTYNTLL 326
Score = 42.4 bits (98), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 31/119 (26%), Positives = 50/119 (42%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+IS FCR G + Q+ + K D V +S++ C + + +++ ++
Sbjct: 465 IISGFCRKGELDRAFQMKQEMVEKGVSPDAVTYSSLIQGLCEMRRLTEACDLSQEMLDMG 524
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEA 119
+ PD T+ LI +C E A +M KG P+ S LI L K EA
Sbjct: 525 LPPDEFTYTTLINAYCVEGDLNKALHLHDEMIHKGFLPDAVTYSVLINGLNKQARTREA 583
Score = 40.0 bits (92), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 21/79 (26%), Positives = 42/79 (53%)
Query: 29 DVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYMLAYRTM 88
DVV ++++ +CR G+++ + +++ E +SPD T+ LI+ C+ + A
Sbjct: 458 DVVSYSTIISGFCRKGELDRAFQMKQEMVEKGVSPDAVTYSSLIQGLCEMRRLTEACDLS 517
Query: 89 VDMHRKGHQPEEELCSSLI 107
+M G P+E ++LI
Sbjct: 518 QEMLDMGLPPDEFTYTTLI 536
>gi|218193953|gb|EEC76380.1| hypothetical protein OsI_13992 [Oryza sativa Indica Group]
Length = 822
Score = 56.2 bits (134), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 37/136 (27%), Positives = 62/136 (45%), Gaps = 10/136 (7%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
MI +CRS +EE + L + + VV N+++ +Y R GD++ M ++ +++E
Sbjct: 186 MIFGYCRSAEWEEARHLLDSMRQEGTQPGVVTWNTLISSYARFGDLDVAMELLGQMEESG 245
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEE-------ELCSSLIFHLGKM 113
++PD T+ L+ F A R + M G +P C+SL
Sbjct: 246 VAPDVVTWTSLVSGFVHMDRSDEALRCFIRMRLAGVEPNGMSIACAISACASLKLLNQAK 305
Query: 114 RAHSEAL---SVYNML 126
HS A+ SV N+L
Sbjct: 306 ELHSHAIKVGSVNNVL 321
Score = 42.4 bits (98), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 24/99 (24%), Positives = 43/99 (43%)
Query: 29 DVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYMLAYRTM 88
D+ NSM+ YCR+ + E H++ + + P T++ LI + + +A +
Sbjct: 179 DLGTWNSMIFGYCRSAEWEEARHLLDSMRQEGTQPGVVTWNTLISSYARFGDLDVAMELL 238
Query: 89 VDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVYNMLR 127
M G P+ +SL+ M EAL + +R
Sbjct: 239 GQMEESGVAPDVVTWTSLVSGFVHMDRSDEALRCFIRMR 277
Score = 37.7 bits (86), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 24/99 (24%), Positives = 43/99 (43%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
MIS + ++G + +L E + +V+ N+M+ Y R GD E + + ++
Sbjct: 357 MISGYAQAGYCGKAYELFCKMENYGVRRNVITWNTMISGYIRNGDDERAFELFQMMESHG 416
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPE 99
+ D T++ILI Y A R M +P+
Sbjct: 417 VKRDTATWNILIAGSVHNGYYDRAIRIFRQMQALLRRPD 455
>gi|414588908|tpg|DAA39479.1| TPA: chloroplast RNA splicing4 [Zea mays]
Length = 1438
Score = 56.2 bits (134), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 31/144 (21%), Positives = 67/144 (46%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
MIS C F + + + + E K D+ +LN++L Y G+ + V R + E
Sbjct: 891 MISLLCHHNRFRDVELMIAEMEGAGFKPDLAILNALLNMYTAAGNFDRTTQVYRSILEAG 950
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ PD +T++ LI +C+ + + +M ++G P+ + SL+ K +A
Sbjct: 951 LEPDEDTYNTLIVMYCRSFRPEEGFTLLNEMGKRGLTPKLQSYKSLLAASAKAELREQAD 1010
Query: 121 SVYNMLRYSKRSMCKALHEKILHI 144
++ +R + ++++ ++ I
Sbjct: 1011 QIFEEMRSKSYQLNRSIYHMMMKI 1034
Score = 42.0 bits (97), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 33/122 (27%), Positives = 56/122 (45%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
M+S R G EE ++L + K D + NS+L A+ + G+++ V H +L +
Sbjct: 334 MVSVHGRCGKAEEAERLFRELVEKGFMPDAITYNSLLYAFAKEGNVDKVEHTCEQLVKAG 393
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ T++ +I + K LA +M G P+ + +I LGKM +EA
Sbjct: 394 FKKNEITYNTMIHMYGKMGRLDLAVGLYDEMRAMGCTPDAVTYTVMIDSLGKMNRIAEAG 453
Query: 121 SV 122
V
Sbjct: 454 KV 455
Score = 41.6 bits (96), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 57/127 (44%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+ISA +S E+ + D A + D+ N+M+ + R G E + R+L E
Sbjct: 299 LISACSQSSNLEDAVTVFEDMIASECRPDLWTYNAMVSVHGRCGKAEEAERLFRELVEKG 358
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
PD T++ L+ F KE T + + G + E +++I GKM A+
Sbjct: 359 FMPDAITYNSLLYAFAKEGNVDKVEHTCEQLVKAGFKKNEITYNTMIHMYGKMGRLDLAV 418
Query: 121 SVYNMLR 127
+Y+ +R
Sbjct: 419 GLYDEMR 425
>gi|30103011|gb|AAP21424.1| putative pentatricopeptide repeat containing protein [Oryza sativa
Japonica Group]
gi|222626012|gb|EEE60144.1| hypothetical protein OsJ_13038 [Oryza sativa Japonica Group]
gi|374087691|gb|AEY82646.1| chloroplast ALBL [Oryza sativa Japonica Group]
Length = 859
Score = 55.8 bits (133), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 37/136 (27%), Positives = 62/136 (45%), Gaps = 10/136 (7%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
MI +CRS +EE + L + + VV N+++ +Y R GD++ M ++ +++E
Sbjct: 223 MIFGYCRSAEWEEARHLLDSMRQEGTQPGVVTWNTLISSYARFGDLDVAMELLGQMEESG 282
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEE-------ELCSSLIFHLGKM 113
++PD T+ L+ F A R + M G +P C+SL
Sbjct: 283 VAPDVVTWTSLVSGFVHMDRSDEALRCFIRMRLAGVEPNGMSIACAISACASLKLLNQAK 342
Query: 114 RAHSEAL---SVYNML 126
HS A+ SV N+L
Sbjct: 343 ELHSHAIKVGSVNNVL 358
Score = 42.4 bits (98), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 24/99 (24%), Positives = 43/99 (43%)
Query: 29 DVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYMLAYRTM 88
D+ NSM+ YCR+ + E H++ + + P T++ LI + + +A +
Sbjct: 216 DLGTWNSMIFGYCRSAEWEEARHLLDSMRQEGTQPGVVTWNTLISSYARFGDLDVAMELL 275
Query: 89 VDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVYNMLR 127
M G P+ +SL+ M EAL + +R
Sbjct: 276 GQMEESGVAPDVVTWTSLVSGFVHMDRSDEALRCFIRMR 314
Score = 37.7 bits (86), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 24/99 (24%), Positives = 43/99 (43%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
MIS + ++G + +L E + +V+ N+M+ Y R GD E + + ++
Sbjct: 394 MISGYAQAGYCGKAYELFCKMENYGVRRNVITWNTMISGYIRNGDDERAFELFQMMESHG 453
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPE 99
+ D T++ILI Y A R M +P+
Sbjct: 454 VKRDTATWNILIAGSVHNGYYDRAIRIFRQMQALLRRPD 492
>gi|384493379|gb|EIE83870.1| hypothetical protein RO3G_08575 [Rhizopus delemar RA 99-880]
Length = 493
Score = 55.8 bits (133), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 31/122 (25%), Positives = 64/122 (52%), Gaps = 4/122 (3%)
Query: 16 QLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYF 75
+ G+ ++ +YD+ N++L AY R D +V +RK++E +SP ++++++++ F
Sbjct: 24 NVVGEMNSQKLRYDLNTYNALLAAYARAKDQTNVTETLRKMEEEGVSPTTDSYNLIMEAF 83
Query: 76 CKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVYNMLRYSKRSMCK 135
+K L R +M +KG EL S +HL + + ++ L++ + KR +
Sbjct: 84 GNDKNIALQNRLKEEMQQKGI----ELNSVTYYHLLRGQQNNIELALETLEDMKKRGIEP 139
Query: 136 AL 137
L
Sbjct: 140 TL 141
>gi|297806115|ref|XP_002870941.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297316778|gb|EFH47200.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 719
Score = 55.8 bits (133), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 32/127 (25%), Positives = 55/127 (43%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
M++A C+ G E+ + + K D+V N+++ AY G ME +M +
Sbjct: 231 MVNALCKDGKMEKVGTFLSEVQEKGVYPDIVTYNTLISAYSSQGLMEEAFELMHAMPSKG 290
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
SP T++ +I CK Y A +M R G P+ SL+ K E
Sbjct: 291 FSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDAVETE 350
Query: 121 SVYNMLR 127
++++ +R
Sbjct: 351 NIFSDMR 357
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 27/107 (25%), Positives = 50/107 (46%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C+ G + +L + K K DVV N++L + + GD+++ + +
Sbjct: 476 LIDGHCKLGNLQNAMELFKKMKEKRIKLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKE 535
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLI 107
I P +F IL+ C + A+R +M K +P +C+S+I
Sbjct: 536 ILPTPISFSILVNALCSKGHLSEAFRVWDEMISKSIKPTVMICNSMI 582
Score = 48.9 bits (115), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 40/74 (54%)
Query: 29 DVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYMLAYRTM 88
DV NS+L +CR M+ V+RK+ E ++PD +T+ LI F + A+R
Sbjct: 646 DVFTYNSILHGFCRENQMKEAEAVLRKMIERGVNPDRSTYTSLINGFVSQDNLTEAFRFH 705
Query: 89 VDMHRKGHQPEEEL 102
+M ++G P+++
Sbjct: 706 DEMLQRGFSPDDKF 719
Score = 45.8 bits (107), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 34/128 (26%), Positives = 57/128 (44%), Gaps = 1/128 (0%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I + R G E ++ + +V LN M+ A C+ G ME V + ++ E
Sbjct: 196 LIGSLVRIGWVELAWRIYQEISRSGVGVNVYTLNIMVNALCKDGKMEKVGTFLSEVQEKG 255
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ PD T++ LI + + + A+ M M KG P +++I L K + A
Sbjct: 256 VYPDIVTYNTLISAYSSQGLMEEAFELMHAMPSKGFSPGVYTYNTVINGLCKHGKYERAK 315
Query: 121 SVY-NMLR 127
V+ MLR
Sbjct: 316 EVFAEMLR 323
Score = 44.7 bits (104), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 27/119 (22%), Positives = 59/119 (49%)
Query: 6 CRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDY 65
C+ G ET+ + D ++ D+V +SM+ + R+G+++ + + E + PD
Sbjct: 341 CKKGDAVETENIFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDN 400
Query: 66 NTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVYN 124
+ ILI+ +C++ M A +M ++G + ++++ L K + EA ++N
Sbjct: 401 VIYTILIQGYCRKGMISEAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFN 459
Score = 41.2 bits (95), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 34/157 (21%), Positives = 71/157 (45%), Gaps = 2/157 (1%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+++A C G E ++ + +K K V++ NSM+ YCR+G+ + K+
Sbjct: 546 LVNALCSKGHLSEAFRVWDEMISKSIKPTVMICNSMIKGYCRSGNASDGEIFLEKMISEG 605
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRK--GHQPEEELCSSLIFHLGKMRAHSE 118
PD +++ LI F KE+ A+ + M K G P+ +S++ + E
Sbjct: 606 FVPDCISYNTLIYGFVKEENMSKAFGLVKKMEEKQGGLVPDVFTYNSILHGFCRENQMKE 665
Query: 119 ALSVYNMLRYSKRSMCKALHEKILHILISGKLLKDAY 155
A +V + + ++ + +++ +S L +A+
Sbjct: 666 AEAVLRKMIERGVNPDRSTYTSLINGFVSQDNLTEAF 702
Score = 37.0 bits (84), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 29/127 (22%), Positives = 53/127 (41%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+ISA+ G EE +L +K V N+++ C+ G E V ++
Sbjct: 266 LISAYSSQGLMEEAFELMHAMPSKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSG 325
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+SPD T+ L+ CK+ + DM + P+ SS++ + +AL
Sbjct: 326 LSPDSTTYRSLLMEACKKGDAVETENIFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKAL 385
Query: 121 SVYNMLR 127
+N ++
Sbjct: 386 MYFNSVK 392
Score = 36.6 bits (83), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 25/107 (23%), Positives = 48/107 (44%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
M+S F RSG ++ + D V+ ++ YCR G + M++ ++ +
Sbjct: 371 MMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISEAMNLRNEMLQQG 430
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLI 107
+ D T++ ++ CK KM A + +M +G P+ + LI
Sbjct: 431 CAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERGLFPDSYTLTILI 477
Score = 35.8 bits (81), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 21/77 (27%), Positives = 33/77 (42%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I +CR G E L + + DVV N++L C+ + + ++ E
Sbjct: 406 LIQGYCRKGMISEAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERG 465
Query: 61 ISPDYNTFHILIKYFCK 77
+ PD T ILI CK
Sbjct: 466 LFPDSYTLTILIDGHCK 482
Score = 35.4 bits (80), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 32/154 (20%), Positives = 61/154 (39%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ C+ G +E K++ + D S+L C+ GD ++ +
Sbjct: 301 VINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDAVETENIFSDMRSRD 360
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ PD F ++ F + A + G P+ + + LI + SEA+
Sbjct: 361 VVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISEAM 420
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLKDA 154
++ N + +M + ILH L K+L +A
Sbjct: 421 NLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEA 454
>gi|357460281|ref|XP_003600422.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355489470|gb|AES70673.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 512
Score = 55.8 bits (133), Expect = 6e-06, Method: Composition-based stats.
Identities = 35/122 (28%), Positives = 61/122 (50%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ AFC+ G +E K + K K ++V NS++ YC ++ + + ++
Sbjct: 285 LVDAFCKEGKVKEAKNVFVVMMKKDVKPNIVTYNSLMNGYCLVNEVNKAESIFNTMAQIG 344
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
++PD +++ I+I FCK KM A + +MH K P+ +SLI L K S AL
Sbjct: 345 VAPDVHSYSIMISGFCKIKMVDEAMKLFEEMHCKQIFPDVVTYNSLIDGLCKSGRISYAL 404
Query: 121 SV 122
+
Sbjct: 405 KL 406
Score = 44.3 bits (103), Expect = 0.017, Method: Composition-based stats.
Identities = 31/126 (24%), Positives = 56/126 (44%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C+ + + AK VV N+++C C G ++ + ++ K+
Sbjct: 215 IIDGVCKDKLVNDAFDFYSEMVAKRICPTVVTYNTLICGLCIMGQLKDAIGLLHKMILEN 274
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
I+P TF IL+ FCKE A V M +K +P +SL+ + ++A
Sbjct: 275 INPTVYTFSILVDAFCKEGKVKEAKNVFVVMMKKDVKPNIVTYNSLMNGYCLVNEVNKAE 334
Query: 121 SVYNML 126
S++N +
Sbjct: 335 SIFNTM 340
Score = 43.5 bits (101), Expect = 0.031, Method: Composition-based stats.
Identities = 24/96 (25%), Positives = 45/96 (46%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C+SG +L G+ + +++ NS+L A C+ ++ + ++ KL +
Sbjct: 390 LIDGLCKSGRISYALKLIGEMHDRGQPPNIITYNSLLDALCKNHHVDKAIELLTKLKDHN 449
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGH 96
I P T++ILI CK A + D+ G+
Sbjct: 450 IQPSVCTYNILINGLCKSGRLKDAQKVFEDVLVNGY 485
Score = 40.4 bits (93), Expect = 0.24, Method: Composition-based stats.
Identities = 35/148 (23%), Positives = 62/148 (41%), Gaps = 8/148 (5%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
MIS FC+ +E +L + K DVV NS++ C++G + + ++ ++ +
Sbjct: 355 MISGFCKIKMVDEAMKLFEEMHCKQIFPDVVTYNSLIDGLCKSGRISYALKLIGEMHDRG 414
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
P+ T++ L+ CK A + + QP + LI L K +A
Sbjct: 415 QPPNIITYNSLLDALCKNHHVDKAIELLTKLKDHNIQPSVCTYNILINGLCKSGRLKDAQ 474
Query: 121 SV--------YNMLRYSKRSMCKALHEK 140
V YN+ Y+ +M K +K
Sbjct: 475 KVFEDVLVNGYNIDVYTYNTMIKGFCKK 502
>gi|357140125|ref|XP_003571621.1| PREDICTED: pentatricopeptide repeat-containing protein At4g19440,
chloroplastic-like [Brachypodium distachyon]
Length = 814
Score = 55.8 bits (133), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 34/126 (26%), Positives = 60/126 (47%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
MI C+ EE +L D K K D + NS++ AYC G ME +H++ ++
Sbjct: 518 MIQGCCKDSKIEEALKLRDDMIRKGFKPDAYMFNSIIHAYCDLGKMEEALHLLGQMKIEG 577
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ PD ++ +I +CK K A + ++ G +P + ++LI G+ S A+
Sbjct: 578 VQPDVVSYGTIIDGYCKAKDIQKANEYLNELMACGLKPNAVIYNALIGGYGRNGNISGAI 637
Query: 121 SVYNML 126
V + +
Sbjct: 638 GVLDTM 643
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/162 (22%), Positives = 77/162 (47%), Gaps = 5/162 (3%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I CR G F E +L + +K K V N + A C+ G+ME ++ ++
Sbjct: 342 LIDWHCRKGHFTEAIRLFDEMVSKEMKSTAVTYNLIARALCKEGEMERAERILEEMLSTG 401
Query: 61 ISPDYNTFHILIKYFCKEKMYMLA-YRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEA 119
++ F+ ++ + + + R + +M ++G +P + L ++ L + R H EA
Sbjct: 402 MTIHSGLFNSVVAGLLQRTGRLESVVRLISEMVKRGMKPNDALMTACTKQLCQGRRHQEA 461
Query: 120 LSVYNMLRYSKRSMC--KALHEKILHILISGKLLKDAYIVVK 159
+ ++ L+ ++ +C A ++H L GK +K A V++
Sbjct: 462 VGIW--LKMLEKGLCINIATSNALIHGLCEGKNMKGATEVLR 501
Score = 41.6 bits (96), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 25/109 (22%), Positives = 49/109 (44%), Gaps = 2/109 (1%)
Query: 1 MISAFCRSGCFEETKQLAGDF--EAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDE 58
MI A C+ G ++ ++ D V N ++ A C++G ++ + + +++E
Sbjct: 235 MIKALCKVGKVDDGFKILSDLIHAGLQQSAGAVPYNLLMDALCKSGRVDEAIRLKGRMEE 294
Query: 59 LAISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLI 107
++P TF ILI + + + +M G P E +C+ LI
Sbjct: 295 SRVAPSMVTFGILINGLKRSDRFGEVGALLREMEGLGITPNEVICNELI 343
Score = 40.0 bits (92), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 24/88 (27%), Positives = 45/88 (51%), Gaps = 3/88 (3%)
Query: 29 DVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYMLAYRTM 88
++ N+++ C +M+ V+R + + D T++I+I+ CK+ A +
Sbjct: 476 NIATSNALIHGLCEGKNMKGATEVLRTMVNKGMELDNITYNIMIQGCCKDSKIEEALKLR 535
Query: 89 VDMHRKGHQPEEELCSSLIF---HLGKM 113
DM RKG +P+ + +S+I LGKM
Sbjct: 536 DDMIRKGFKPDAYMFNSIIHAYCDLGKM 563
Score = 38.1 bits (87), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 23/98 (23%), Positives = 43/98 (43%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I A+C G EE L G + + + DVV +++ YC+ D++ + +L
Sbjct: 553 IIHAYCDLGKMEEALHLLGQMKIEGVQPDVVSYGTIIDGYCKAKDIQKANEYLNELMACG 612
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQP 98
+ P+ ++ LI + + A + M G QP
Sbjct: 613 LKPNAVIYNALIGGYGRNGNISGAIGVLDTMESIGIQP 650
>gi|224103961|ref|XP_002313262.1| predicted protein [Populus trichocarpa]
gi|222849670|gb|EEE87217.1| predicted protein [Populus trichocarpa]
Length = 559
Score = 55.8 bits (133), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 34/155 (21%), Positives = 74/155 (47%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ C+ G EE +L G+ + K + DVV+ ++++ +C G ++ + ++ E
Sbjct: 51 LMDGLCKEGRVEEAMRLLGEMKRKGLEVDVVVYSTLISGFCSKGCLDRGKALFDEMLEKG 110
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
ISP+ + LI FCK+ ++ A + M +G QP+ + +I L K +AL
Sbjct: 111 ISPNVVVYSCLINGFCKKGLWREATAVLHTMTERGIQPDVYTYTCMIGGLCKDGRARKAL 170
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLKDAY 155
+++++ + +++ L + DA+
Sbjct: 171 DLFDLMTEKGEEPSTVTYNVLINGLCKEGCIGDAF 205
Score = 43.9 bits (102), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 26/101 (25%), Positives = 47/101 (46%), Gaps = 5/101 (4%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKL--DE 58
+I+ C+ GC + ++ K + +VV N+++ C G ++ M + L D
Sbjct: 191 LINGLCKEGCIGDAFKIFETMLEKGKRLEVVSYNTLIMGLCNNGKLDEAMKLFSSLLEDG 250
Query: 59 LAISPDYNTFHILIKYFCKEKMYMLA---YRTMVDMHRKGH 96
+ PD TF+ +I+ CKE A Y TM++ G+
Sbjct: 251 NYVEPDVITFNTVIQGLCKEGRLDKAVEIYDTMIERGSFGN 291
Score = 43.5 bits (101), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 29/126 (23%), Positives = 53/126 (42%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ FC+ G + E + + + DV M+ C+ G + + + E
Sbjct: 121 LINGFCKKGLWREATAVLHTMTERGIQPDVYTYTCMIGGLCKDGRARKALDLFDLMTEKG 180
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
P T+++LI CKE A++ M KG + E ++LI L EA+
Sbjct: 181 EEPSTVTYNVLINGLCKEGCIGDAFKIFETMLEKGKRLEVVSYNTLIMGLCNNGKLDEAM 240
Query: 121 SVYNML 126
+++ L
Sbjct: 241 KLFSSL 246
Score = 41.6 bits (96), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 27/127 (21%), Positives = 54/127 (42%), Gaps = 3/127 (2%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++++ C+ E+ ++L + + + D + N M+ + GD+ S ++ + ++
Sbjct: 368 LMASLCKESSLEQARRLFQEMKESNCEPDTISFNIMIDGTLKAGDIHSAKELLNDMQQMG 427
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
++PD T+ I K A M G P+ + SLI G + E
Sbjct: 428 LTPDAYTYSSFINRLSKLGQMEEAKGAFDSMIASGITPDNHVYDSLIKGFG---LNDEIE 484
Query: 121 SVYNMLR 127
V N+LR
Sbjct: 485 EVINLLR 491
Score = 38.5 bits (88), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 31/131 (23%), Positives = 54/131 (41%), Gaps = 14/131 (10%)
Query: 1 MISAFCR-------SGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVM 53
MI FC+ G F K ++G +D N+++ + C+ +E +
Sbjct: 333 MIDGFCKMHMLNFAKGLFSRMK-ISGLSPTLFD------YNTLMASLCKESSLEQARRLF 385
Query: 54 RKLDELAISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKM 113
+++ E PD +F+I+I K A + DM + G P+ SS I L K+
Sbjct: 386 QEMKESNCEPDTISFNIMIDGTLKAGDIHSAKELLNDMQQMGLTPDAYTYSSFINRLSKL 445
Query: 114 RAHSEALSVYN 124
EA ++
Sbjct: 446 GQMEEAKGAFD 456
Score = 37.7 bits (86), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 21/79 (26%), Positives = 43/79 (54%)
Query: 29 DVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYMLAYRTM 88
D+V N+++ C+ +E + ++ +++ + P+ T+ IL+ CKE A R +
Sbjct: 9 DIVSYNTIINGLCKEKRLEKAVDLLVEMEGSSCEPNSFTYCILMDGLCKEGRVEEAMRLL 68
Query: 89 VDMHRKGHQPEEELCSSLI 107
+M RKG + + + S+LI
Sbjct: 69 GEMKRKGLEVDVVVYSTLI 87
Score = 37.4 bits (85), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 29/134 (21%), Positives = 57/134 (42%), Gaps = 2/134 (1%)
Query: 1 MISAFCRSGCFEETKQLAGDF--EAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDE 58
+I C +G +E +L + Y + DV+ N+++ C+ G ++ + + + E
Sbjct: 226 LIMGLCNNGKLDEAMKLFSSLLEDGNYVEPDVITFNTVIQGLCKEGRLDKAVEIYDTMIE 285
Query: 59 LAISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSE 118
+ T HILI + K + A +H+ G P S +I KM +
Sbjct: 286 RGSFGNLFTCHILIGEYIKSGIIDKAMELWKRVHKLGLVPSSTTYSVMIDGFCKMHMLNF 345
Query: 119 ALSVYNMLRYSKRS 132
A +++ ++ S S
Sbjct: 346 AKGLFSRMKISGLS 359
>gi|356529495|ref|XP_003533326.1| PREDICTED: uncharacterized protein LOC100779660 [Glycine max]
Length = 1205
Score = 55.8 bits (133), Expect = 6e-06, Method: Composition-based stats.
Identities = 33/112 (29%), Positives = 54/112 (48%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ A C+ G +E K + K DV+ ++++ Y +++ HV + +
Sbjct: 275 LVDALCKEGKVKEAKSVLAVMLKACVKPDVITYSTLMDGYFLVYEVKKAQHVFNAMSLMG 334
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGK 112
++PD +T+ ILI FCK KM A +MH+K P SSLI L K
Sbjct: 335 VTPDVHTYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCK 386
Score = 43.9 bits (102), Expect = 0.020, Method: Composition-based stats.
Identities = 26/126 (20%), Positives = 56/126 (44%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ C G + A+ + + V +++ C+ GD + + ++RK+D
Sbjct: 1002 LINGLCLKGQVNKALHFHDKLLAQGFQLNQVSYGTLINGVCKIGDTRAAIKLLRKIDGRL 1061
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
PD ++ +I CK ++ AY +M+ KG + ++LI+ + EA+
Sbjct: 1062 TKPDVVMYNTIIDALCKHQLVSKAYGLFFEMNVKGISADVVTYNTLIYGFCIVGKLKEAI 1121
Query: 121 SVYNML 126
+ N +
Sbjct: 1122 GLLNKM 1127
Score = 41.6 bits (96), Expect = 0.12, Method: Composition-based stats.
Identities = 20/78 (25%), Positives = 39/78 (50%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I A C+ + L + K DVV N+++ +C G ++ + ++ K+
Sbjct: 1072 IIDALCKHQLVSKAYGLFFEMNVKGISADVVTYNTLIYGFCIVGKLKEAIGLLNKMVLKT 1131
Query: 61 ISPDYNTFHILIKYFCKE 78
I+P+ T++IL+ CKE
Sbjct: 1132 INPNVRTYNILVDALCKE 1149
Score = 40.0 bits (92), Expect = 0.30, Method: Composition-based stats.
Identities = 22/97 (22%), Positives = 42/97 (43%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C+SG L + + +V+ +S++ C+ G ++ + + K+ +
Sbjct: 380 LIDGLCKSGRIPYVWDLIDEMHDRGQPANVITYSSLIDGLCKNGHLDRAIALFNKMKDQG 439
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQ 97
I P+ TF IL+ CK A D+ KG+
Sbjct: 440 IRPNTFTFTILLDGLCKGGRLKDAQEVFQDLLTKGYH 476
Score = 39.7 bits (91), Expect = 0.45, Method: Composition-based stats.
Identities = 24/107 (22%), Positives = 50/107 (46%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I A C+ E L + K DVV ++++ +C G ++ + ++ ++
Sbjct: 205 IIDALCKYQLVSEAYGLFSEMTVKGISADVVTYSTLIYGFCIEGKLKEAIGLLNEMVLKT 264
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLI 107
I+P+ T++IL+ CKE A + M + +P+ S+L+
Sbjct: 265 INPNVYTYNILVDALCKEGKVKEAKSVLAVMLKACVKPDVITYSTLM 311
Score = 38.5 bits (88), Expect = 0.88, Method: Composition-based stats.
Identities = 17/72 (23%), Positives = 37/72 (51%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ C+ G ++ +++ D K +V N M+ +C+ G +E + ++ K+++
Sbjct: 450 LLDGLCKGGRLKDAQEVFQDLLTKGYHLNVYTYNVMIDGHCKQGLLEEALTMLSKMEDNG 509
Query: 61 ISPDYNTFHILI 72
PD TF I+I
Sbjct: 510 CIPDAVTFEIII 521
Score = 38.1 bits (87), Expect = 1.2, Method: Composition-based stats.
Identities = 27/127 (21%), Positives = 56/127 (44%), Gaps = 6/127 (4%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C G ++ A+ + + V +++ C+ GD + + +++K+D
Sbjct: 135 LIKGLCLKGQVKKALHFHDKLLAQGFQLNQVSYGTLINGVCKIGDTRAAIKLLQKIDGRL 194
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHL---GKMRAHS 117
P+ + +I CK ++ AY +M KG + S+LI+ GK++
Sbjct: 195 TKPNVVMYSTIIDALCKYQLVSEAYGLFSEMTVKGISADVVTYSTLIYGFCIEGKLK--- 251
Query: 118 EALSVYN 124
EA+ + N
Sbjct: 252 EAIGLLN 258
Score = 35.8 bits (81), Expect = 6.4, Method: Composition-based stats.
Identities = 16/78 (20%), Positives = 37/78 (47%)
Query: 30 VVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYMLAYRTMV 89
++ N +L ++ + + + + +L+ I PD T +ILI FC + +
Sbjct: 59 IIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLITLNILINCFCHMGQITFGFSVLA 118
Query: 90 DMHRKGHQPEEELCSSLI 107
+ ++G+ P+ ++LI
Sbjct: 119 KILKRGYPPDTVTLNTLI 136
>gi|414875981|tpg|DAA53112.1| TPA: hypothetical protein ZEAMMB73_920038 [Zea mays]
Length = 574
Score = 55.5 bits (132), Expect = 7e-06, Method: Composition-based stats.
Identities = 28/98 (28%), Positives = 52/98 (53%), Gaps = 3/98 (3%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHV---MRKLD 57
+IS FC++G + +A + A V N+++ YC+ G + + HV ++++
Sbjct: 194 VISGFCKTGQLRKAGDVAKNISAWGVAPSVATYNTLIDGYCKRGQVGKMYHVDALLKEMI 253
Query: 58 ELAISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKG 95
+ ISPD TF++LI +CKE A + +M ++G
Sbjct: 254 QAGISPDVVTFNVLINGYCKEPNITAAIKVFQEMRQQG 291
Score = 39.7 bits (91), Expect = 0.46, Method: Composition-based stats.
Identities = 20/98 (20%), Positives = 51/98 (52%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ +C+ ++ + + +VV NS++ CR G +E + ++ +++EL
Sbjct: 267 LINGYCKEPNITAAIKVFQEMRQQGIPANVVTYNSLVSGLCREGKVEDSIKLVEEMEELG 326
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQP 98
++ +T + ++ FCK+ M + A + + ++G +P
Sbjct: 327 LACILSTMNSVLNGFCKKGMMVEAEGWVDGIAQRGMKP 364
Score = 39.7 bits (91), Expect = 0.47, Method: Composition-based stats.
Identities = 26/124 (20%), Positives = 56/124 (45%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ F S + L + + K K DVV N ++ A C G++ + ++ ++ E+
Sbjct: 407 LITGFTTSRDWRSVSGLLDEMKEKGVKADVVTYNVLIGALCCKGEVRKAVKLLDEMVEVG 466
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ P + ++ +I FC++ A+ + M ++ + + + + KM EA
Sbjct: 467 LEPKHVAYNTIINGFCEKGDAQGAHEIRLRMEKRKKRANVVTYNVFLKYFCKMGKMDEAN 526
Query: 121 SVYN 124
V N
Sbjct: 527 VVLN 530
Score = 36.2 bits (82), Expect = 5.2, Method: Composition-based stats.
Identities = 24/103 (23%), Positives = 47/103 (45%), Gaps = 5/103 (4%)
Query: 29 DVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKE----KMYMLA 84
D+ N ++ +C+TG + V + + ++P T++ LI +CK KMY +
Sbjct: 187 DLFTFNIVISGFCKTGQLRKAGDVAKNISAWGVAPSVATYNTLIDGYCKRGQVGKMYHVD 246
Query: 85 YRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVYNMLR 127
+ +M + G P+ + LI K + A+ V+ +R
Sbjct: 247 -ALLKEMIQAGISPDVVTFNVLINGYCKEPNITAAIKVFQEMR 288
>gi|18087893|gb|AAL59047.1|AC087182_30 putative membrane-associated salt-inducible protein,3'-partial
[Oryza sativa Japonica Group]
Length = 571
Score = 55.5 bits (132), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 53/113 (46%), Gaps = 3/113 (2%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHV---MRKLD 57
+IS CR G + +A D +A V NS++ YC+ G ++ HV ++++
Sbjct: 197 VISGLCRIGQLRKAGDVAKDIKAWGLAPSVATYNSLIDGYCKKGGAGNMYHVDMLLKEMV 256
Query: 58 ELAISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHL 110
E ISP TF +LI +CK A R +M ++G +SLI L
Sbjct: 257 EAGISPTAVTFGVLINGYCKNSNTAAAVRVFEEMKQQGIAASVVTYNSLISGL 309
Score = 48.5 bits (114), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 23/93 (24%), Positives = 48/93 (51%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ F RSG + L + + K + DVV N ++ A C G++ + ++ ++ E+
Sbjct: 410 LITGFSRSGDWRSASGLLDEMKEKGIEADVVTYNVLIGALCCKGEVRKAVKLLDEMSEVG 469
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHR 93
+ P++ T++ +I+ FC + AY M +
Sbjct: 470 LEPNHLTYNTIIQGFCDKGNIKSAYEIRTRMEK 502
Score = 48.5 bits (114), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 34/123 (27%), Positives = 60/123 (48%), Gaps = 17/123 (13%)
Query: 1 MISAFCRSG-------CFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVM 53
+I+ +C++ FEE KQ + VV NS++ C G +E + +M
Sbjct: 270 LINGYCKNSNTAAAVRVFEEMKQ-------QGIAASVVTYNSLISGLCSEGKVEEGVKLM 322
Query: 54 RKLDELAISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLI---FHL 110
++++L +SP+ TF ++K FCK+ M A + M + +P+ + + LI L
Sbjct: 323 EEMEDLGLSPNEITFGCVLKGFCKKGMMADANDWIDGMTERNVEPDVVIYNILIDVYRRL 382
Query: 111 GKM 113
GKM
Sbjct: 383 GKM 385
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 43/95 (45%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ FC+ G + + + DVV+ N ++ Y R G ME M V + +
Sbjct: 340 VLKGFCKKGMMADANDWIDGMTERNVEPDVVIYNILIDVYRRLGKMEDAMAVKEAMAKKG 399
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKG 95
ISP+ T++ LI F + + A + +M KG
Sbjct: 400 ISPNVTTYNCLITGFSRSGDWRSASGLLDEMKEKG 434
Score = 37.4 bits (85), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 22/99 (22%), Positives = 43/99 (43%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I + R G E+ + K +V N ++ + R+GD S ++ ++ E
Sbjct: 375 LIDVYRRLGKMEDAMAVKEAMAKKGISPNVTTYNCLITGFSRSGDWRSASGLLDEMKEKG 434
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPE 99
I D T+++LI C + A + + +M G +P
Sbjct: 435 IEADVVTYNVLIGALCCKGEVRKAVKLLDEMSEVGLEPN 473
>gi|125535814|gb|EAY82302.1| hypothetical protein OsI_37513 [Oryza sativa Indica Group]
Length = 578
Score = 55.5 bits (132), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 53/113 (46%), Gaps = 3/113 (2%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHV---MRKLD 57
+IS CR G + +A D +A V NS++ YC+ G ++ HV ++++
Sbjct: 197 VISGLCRIGQLRKAGDVAKDIKAWGLAPSVATYNSLIDGYCKKGGAGNMYHVDMLLKEMV 256
Query: 58 ELAISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHL 110
E ISP TF +LI +CK A R +M ++G +SLI L
Sbjct: 257 EAGISPTAVTFGVLINGYCKNSNTAAAVRVFEEMKQQGIAASVVTYNSLISGL 309
Score = 48.5 bits (114), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 34/123 (27%), Positives = 60/123 (48%), Gaps = 17/123 (13%)
Query: 1 MISAFCRSG-------CFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVM 53
+I+ +C++ FEE KQ + VV NS++ C G +E + +M
Sbjct: 270 LINGYCKNSNTAAAVRVFEEMKQ-------QGIAASVVTYNSLISGLCSEGKVEEGVKLM 322
Query: 54 RKLDELAISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLI---FHL 110
++++L +SP+ TF ++K FCK+ M A + M + +P+ + + LI L
Sbjct: 323 EEMEDLGLSPNEITFGCVLKGFCKKGMMADANDWIDGMTERNVEPDVVIYTILIDGYRRL 382
Query: 111 GKM 113
GKM
Sbjct: 383 GKM 385
Score = 48.5 bits (114), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 23/93 (24%), Positives = 48/93 (51%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ F RSG + L + + K + DVV N ++ A C G++ + ++ ++ E+
Sbjct: 410 LITGFSRSGDWRSASGLLDEMKEKGIEADVVTYNVLIGALCCKGEVRKAVKLLDEMSEVG 469
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHR 93
+ P++ T++ +I+ FC + AY M +
Sbjct: 470 LEPNHLTYNTIIQGFCDKGNIKSAYEIRTRMEK 502
Score = 44.7 bits (104), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 24/95 (25%), Positives = 42/95 (44%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ FC+ G + + + DVV+ ++ Y R G ME M V + +
Sbjct: 340 VLKGFCKKGMMADANDWIDGMTERNVEPDVVIYTILIDGYRRLGKMEDAMAVKEAMAKKG 399
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKG 95
ISP+ T++ LI F + + A + +M KG
Sbjct: 400 ISPNVTTYNCLITGFSRSGDWRSASGLLDEMKEKG 434
Score = 38.1 bits (87), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 22/99 (22%), Positives = 43/99 (43%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I + R G E+ + K +V N ++ + R+GD S ++ ++ E
Sbjct: 375 LIDGYRRLGKMEDAMAVKEAMAKKGISPNVTTYNCLITGFSRSGDWRSASGLLDEMKEKG 434
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPE 99
I D T+++LI C + A + + +M G +P
Sbjct: 435 IEADVVTYNVLIGALCCKGEVRKAVKLLDEMSEVGLEPN 473
>gi|115482590|ref|NP_001064888.1| Os10g0484300 [Oryza sativa Japonica Group]
gi|22094354|gb|AAM91881.1| putative membrane-associated salt-inducible protein [Oryza sativa
Japonica Group]
gi|31432736|gb|AAP54334.1| Rf1 protein, mitochondrial precursor, putative, expressed [Oryza
sativa Japonica Group]
gi|78708824|gb|ABB47799.1| Rf1 protein, mitochondrial precursor, putative, expressed [Oryza
sativa Japonica Group]
gi|113639497|dbj|BAF26802.1| Os10g0484300 [Oryza sativa Japonica Group]
Length = 578
Score = 55.5 bits (132), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 53/113 (46%), Gaps = 3/113 (2%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHV---MRKLD 57
+IS CR G + +A D +A V NS++ YC+ G ++ HV ++++
Sbjct: 197 VISGLCRIGQLRKAGDVAKDIKAWGLAPSVATYNSLIDGYCKKGGAGNMYHVDMLLKEMV 256
Query: 58 ELAISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHL 110
E ISP TF +LI +CK A R +M ++G +SLI L
Sbjct: 257 EAGISPTAVTFGVLINGYCKNSNTAAAVRVFEEMKQQGIAASVVTYNSLISGL 309
Score = 48.5 bits (114), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 23/93 (24%), Positives = 48/93 (51%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ F RSG + L + + K + DVV N ++ A C G++ + ++ ++ E+
Sbjct: 410 LITGFSRSGDWRSASGLLDEMKEKGIEADVVTYNVLIGALCCKGEVRKAVKLLDEMSEVG 469
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHR 93
+ P++ T++ +I+ FC + AY M +
Sbjct: 470 LEPNHLTYNTIIQGFCDKGNIKSAYEIRTRMEK 502
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/123 (27%), Positives = 60/123 (48%), Gaps = 17/123 (13%)
Query: 1 MISAFCRSG-------CFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVM 53
+I+ +C++ FEE KQ + VV NS++ C G +E + +M
Sbjct: 270 LINGYCKNSNTAAAVRVFEEMKQ-------QGIAASVVTYNSLISGLCSEGKVEEGVKLM 322
Query: 54 RKLDELAISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLI---FHL 110
++++L +SP+ TF ++K FCK+ M A + M + +P+ + + LI L
Sbjct: 323 EEMEDLGLSPNEITFGCVLKGFCKKGMMADANDWIDGMTERNVEPDVVIYNILIDVYRRL 382
Query: 111 GKM 113
GKM
Sbjct: 383 GKM 385
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 43/95 (45%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ FC+ G + + + DVV+ N ++ Y R G ME M V + +
Sbjct: 340 VLKGFCKKGMMADANDWIDGMTERNVEPDVVIYNILIDVYRRLGKMEDAMAVKEAMAKKG 399
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKG 95
ISP+ T++ LI F + + A + +M KG
Sbjct: 400 ISPNVTTYNCLITGFSRSGDWRSASGLLDEMKEKG 434
Score = 37.4 bits (85), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 22/99 (22%), Positives = 43/99 (43%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I + R G E+ + K +V N ++ + R+GD S ++ ++ E
Sbjct: 375 LIDVYRRLGKMEDAMAVKEAMAKKGISPNVTTYNCLITGFSRSGDWRSASGLLDEMKEKG 434
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPE 99
I D T+++LI C + A + + +M G +P
Sbjct: 435 IEADVVTYNVLIGALCCKGEVRKAVKLLDEMSEVGLEPN 473
>gi|413924821|gb|AFW64753.1| hypothetical protein ZEAMMB73_344298 [Zea mays]
Length = 698
Score = 55.5 bits (132), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 38/148 (25%), Positives = 68/148 (45%), Gaps = 4/148 (2%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+A C+ + + DVV N+M+ +CR GD+ + ++R+
Sbjct: 192 VINALCKCRSASQASDMLNQMVKSRFNPDVVTFNTMIAGFCREGDVREALKLLREAIRRG 251
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ P+ ++ LI FC M+A +V+M +GH P+ +LI L ++AL
Sbjct: 252 LEPNQLSYTPLIHGFCVRGEAMVASDLLVEMMGRGHTPDMITLGALIHGLVVSGQVNDAL 311
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISG 148
V + ++ M A I ++LISG
Sbjct: 312 IVREKM-AERQVMPDA---NIYNVLISG 335
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/133 (22%), Positives = 62/133 (46%), Gaps = 6/133 (4%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDK---YDVVLLNSMLCAYCRTGDMESVMHVMRKLD 57
M+ C G EE + L EA++ + V N ++ YCR GD+ + ++ +++
Sbjct: 87 MVRGLCLEGRVEEGRGL---IEARWGEGCVPGAVFYNVLIDGYCRRGDIGRGLLLLGEME 143
Query: 58 ELAISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHS 117
I P T+ +I + ++ + +M +G P ++ +++I L K R+ S
Sbjct: 144 TKGIIPTVVTYGAIIHWLGRKGDLTKVESLLGEMRARGLSPNVQIYNTVINALCKCRSAS 203
Query: 118 EALSVYNMLRYSK 130
+A + N + S+
Sbjct: 204 QASDMLNQMVKSR 216
Score = 43.9 bits (102), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 27/126 (21%), Positives = 58/126 (46%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I FC G L + + D++ L +++ +G + + V K+ E
Sbjct: 262 LIHGFCVRGEAMVASDLLVEMMGRGHTPDMITLGALIHGLVVSGQVNDALIVREKMAERQ 321
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ PD N +++LI CK++M A + +M + QP++ + ++LI + S+A
Sbjct: 322 VMPDANIYNVLISGLCKKRMLSAAKNLLEEMLEQKVQPDKFIYTTLIDGFVRSDKLSDAR 381
Query: 121 SVYNML 126
++ +
Sbjct: 382 KIFEFM 387
Score = 42.0 bits (97), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 24/107 (22%), Positives = 51/107 (47%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I R G + + L G+ A+ +V + N+++ A C+ ++ ++ +
Sbjct: 157 IIHWLGRKGDLTKVESLLGEMRARGLSPNVQIYNTVINALCKCRSASQASDMLNQMVKSR 216
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLI 107
+PD TF+ +I FC+E A + + + R+G +P + + LI
Sbjct: 217 FNPDVVTFNTMIAGFCREGDVREALKLLREAIRRGLEPNQLSYTPLI 263
Score = 38.1 bits (87), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 28/109 (25%), Positives = 51/109 (46%), Gaps = 5/109 (4%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKY--DVVLLNSMLCAYCRTGDMESVMHVMRKLDE 58
+I F RS + +++ FE +K D+V N M+ YC+ G M+ + M + +
Sbjct: 367 LIDGFVRSDKLSDARKI---FEFMEEKACPDIVAYNVMIKGYCKFGMMKEAVTCMSSMRK 423
Query: 59 LAISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLI 107
PD T+ L+ + K+ + R + DM ++ +P +SLI
Sbjct: 424 AGCIPDEFTYTTLVDGYAKKGDISASLRLLCDMMKRRCKPNIFTYASLI 472
>gi|449442579|ref|XP_004139059.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g01110-like [Cucumis sativus]
Length = 749
Score = 55.5 bits (132), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 30/112 (26%), Positives = 58/112 (51%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+A+CR G EE QL F ++ + ++ N++L C+ G + V+ ++ +L
Sbjct: 298 LINAYCREGLVEEAFQLLNSFSSRGMEPGLLTYNAILYGLCKIGKYDRAKDVLIEMLQLG 357
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGK 112
++P+ T++ L+ C+ + A +M R+G P+ SSLI L +
Sbjct: 358 LTPNAATYNTLLVEICRRDNILEAQEIFDEMSRRGVLPDLVSFSSLIGVLAR 409
Score = 52.4 bits (124), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 32/137 (23%), Positives = 62/137 (45%), Gaps = 2/137 (1%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
M++A C+ FE D E K D+V N+++ AYCR G +E ++
Sbjct: 263 MVNALCKDRKFENVMFFLSDMEGKGVFADIVTYNTLINAYCREGLVEEAFQLLNSFSSRG 322
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ P T++ ++ CK Y A +++M + G P ++L+ + + EA
Sbjct: 323 MEPGLLTYNAILYGLCKIGKYDRAKDVLIEMLQLGLTPNAATYNTLLVEICRRDNILEAQ 382
Query: 121 SVYNMLRYSKRSMCKAL 137
+++ + S+R + L
Sbjct: 383 EIFDEM--SRRGVLPDL 397
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 48/97 (49%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+++ FC SG E L K + ++V N+++ YCR+GDM + K+
Sbjct: 578 VLNGFCSSGLLPEALNLCDQMLEKGIRPNLVTCNTLIKGYCRSGDMPKAYEYLSKMISNG 637
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQ 97
I PD +++ LI + KE A+ + +M ++G Q
Sbjct: 638 IIPDSFSYNTLIDGYLKEANLEKAFILINEMEKRGLQ 674
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/102 (23%), Positives = 50/102 (49%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I + + E+ L + E + +++++ N +L +C G M+ V+RK+ E+
Sbjct: 648 LIDGYLKEANLEKAFILINEMEKRGLQFNIITYNLILNGFCAEGKMQEAEQVLRKMIEIG 707
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEEL 102
I+PD T+ LI + A+R +M ++G P++
Sbjct: 708 INPDGATYSSLINGHVSQDNMKEAFRFHDEMLQRGLVPDDRF 749
Score = 44.7 bits (104), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 27/107 (25%), Positives = 49/107 (45%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I FCR+G + ++ + A+ DVV N+ L C+ + ++ E
Sbjct: 438 LIDGFCRNGALSDALKMRDEMLARGCFMDVVTYNTFLNGLCKKKMFADADMLFNEMVERG 497
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLI 107
+ PD+ TF LI+ +CK+ A M R +P++ ++LI
Sbjct: 498 MVPDFYTFTTLIRGYCKDGNMDKALNLFEAMVRTNLKPDKVTYNTLI 544
Score = 44.7 bits (104), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 25/122 (20%), Positives = 58/122 (47%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ R+G + ++ G+ + +V LN M+ A C+ E+VM + ++
Sbjct: 228 LLGGLVRTGWVDLAWEIYGEVVRGGIELNVYTLNIMVNALCKDRKFENVMFFLSDMEGKG 287
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ D T++ LI +C+E + A++ + +G +P +++++ L K+ + A
Sbjct: 288 VFADIVTYNTLINAYCREGLVEEAFQLLNSFSSRGMEPGLLTYNAILYGLCKIGKYDRAK 347
Query: 121 SV 122
V
Sbjct: 348 DV 349
Score = 42.0 bits (97), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 27/107 (25%), Positives = 50/107 (46%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I FC++G K+L D K D + ++L +C +G + +++ ++ E
Sbjct: 543 LIDGFCKAGEMGRAKELWDDMIRKDIIPDHISYGTVLNGFCSSGLLPEALNLCDQMLEKG 602
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLI 107
I P+ T + LIK +C+ AY + M G P+ ++LI
Sbjct: 603 IRPNLVTCNTLIKGYCRSGDMPKAYEYLSKMISNGIIPDSFSYNTLI 649
Score = 41.2 bits (95), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 27/110 (24%), Positives = 49/110 (44%), Gaps = 6/110 (5%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYD---KYDVVLLNSMLCAYCRTGDMESVMHVMRKLD 57
+I +C+ G ++ L FEA K D V N+++ +C+ G+M + +
Sbjct: 508 LIRGYCKDGNMDKALNL---FEAMVRTNLKPDKVTYNTLIDGFCKAGEMGRAKELWDDMI 564
Query: 58 ELAISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLI 107
I PD+ ++ ++ FC + A M KG +P C++LI
Sbjct: 565 RKDIIPDHISYGTVLNGFCSSGLLPEALNLCDQMLEKGIRPNLVTCNTLI 614
Score = 40.4 bits (93), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 22/98 (22%), Positives = 42/98 (42%)
Query: 2 ISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAI 61
++ C+ F + L + + D +++ YC+ G+M+ +++ + +
Sbjct: 474 LNGLCKKKMFADADMLFNEMVERGMVPDFYTFTTLIRGYCKDGNMDKALNLFEAMVRTNL 533
Query: 62 SPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPE 99
PD T++ LI FCK A DM RK P+
Sbjct: 534 KPDKVTYNTLIDGFCKAGEMGRAKELWDDMIRKDIIPD 571
>gi|224133034|ref|XP_002327945.1| predicted protein [Populus trichocarpa]
gi|222837354|gb|EEE75733.1| predicted protein [Populus trichocarpa]
Length = 1450
Score = 55.5 bits (132), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 36/119 (30%), Positives = 57/119 (47%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
MIS + R G + +QL D E++ D V NS L A+ R G++E V + ++ ++
Sbjct: 369 MISVYGRCGLSGKAEQLFNDLESRGFFPDAVSYNSFLYAFAREGNVEKVKDICEEMVKIG 428
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEA 119
D T++ +I + K+ LA + DM G P+ + LI LGK EA
Sbjct: 429 FGKDEMTYNTMIHMYGKQGQNDLALQLYRDMKSSGRNPDVITYTVLIDSLGKTNKIEEA 487
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 34/146 (23%), Positives = 65/146 (44%), Gaps = 4/146 (2%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
M CR + + + + E K D+ + NS+L Y D + +++ E
Sbjct: 926 MAQLLCRGKQVRDVEAMLSEMEEAGFKPDLSIWNSVLKMYVAIDDFRKTTQIYQRIKEDG 985
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ PD +T++ILI +C++ M +M G +P+ + SL+ GK + +A
Sbjct: 986 LEPDEDTYNILIVMYCRDHRPKEGLVLMDEMRTVGLEPKLDTYKSLVASFGKQQLVEQAE 1045
Query: 121 SVYNMLRYSKRSMCKALHEKILHILI 146
++ L+ + CK L HI++
Sbjct: 1046 ELFEELQSTG---CK-LDRSFYHIMM 1067
Score = 37.0 bits (84), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 25/97 (25%), Positives = 45/97 (46%), Gaps = 2/97 (2%)
Query: 30 VVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCK--EKMYMLAYRT 87
V + N+M+ Y R+G V + + E PD +F+ LI K E LA
Sbjct: 256 VKVYNAMMGVYARSGKFNKVQELFDLMRERGCEPDLVSFNTLINARLKAGEMTPNLAIEL 315
Query: 88 MVDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVYN 124
+ ++ R G +P+ ++LI + EA++V++
Sbjct: 316 LTEVRRSGLRPDIITYNTLISACSRASNLEEAVNVFD 352
Score = 37.0 bits (84), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 30/132 (22%), Positives = 56/132 (42%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+ISA R+ EE + D A + + D+ N+M+ Y R G + L+
Sbjct: 334 LISACSRASNLEEAVNVFDDMVAHHCEPDLWTYNAMISVYGRCGLSGKAEQLFNDLESRG 393
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
PD +++ + F +E +M + G +E +++I GK + AL
Sbjct: 394 FFPDAVSYNSFLYAFAREGNVEKVKDICEEMVKIGFGKDEMTYNTMIHMYGKQGQNDLAL 453
Query: 121 SVYNMLRYSKRS 132
+Y ++ S R+
Sbjct: 454 QLYRDMKSSGRN 465
>gi|147841262|emb|CAN75614.1| hypothetical protein VITISV_022293 [Vitis vinifera]
Length = 590
Score = 55.5 bits (132), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 50/107 (46%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ C G ++ +L + + + D V N+++ AYC+ GDM S M V +K+ E
Sbjct: 341 ILRKLCEEGKIKDANRLLNEMSERKVEPDNVTCNTLINAYCKIGDMGSAMKVKKKMLEAG 400
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLI 107
+ PD TF LI FCK A + +M G P S L+
Sbjct: 401 LKPDQFTFKALIHGFCKLHEVDSAKEFLFEMLDAGFSPSYSTYSWLV 447
Score = 53.5 bits (127), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/154 (24%), Positives = 72/154 (46%), Gaps = 2/154 (1%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I A C+SG E+ +QL + E+++ D+ N+++ YC+ G + + +++
Sbjct: 203 LIHACCKSGDVEKAEQLLNEMESRFIFPDLFTYNTLISLYCKKGMHYEALGIQDRMERGG 262
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+SPD T++ LI FC+E A R +++ G P ++LI ++ EAL
Sbjct: 263 VSPDIVTYNSLIYGFCREGRMREALRLFREIN--GATPNHVTYTTLIDGYCRVNDLEEAL 320
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLKDA 154
+ ++ + IL L +KDA
Sbjct: 321 RLREVMEVEGLHPGVVTYNSILRKLCEEGKIKDA 354
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 53/98 (54%), Gaps = 6/98 (6%)
Query: 29 DVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYMLAYRTM 88
++ + N ++ A C++GD+E ++ +++ I PD T++ LI +CK+ M+ A
Sbjct: 196 NIHIFNVLIHACCKSGDVEKAEQLLNEMESRFIFPDLFTYNTLISLYCKKGMHYEALGIQ 255
Query: 89 VDMHRKGHQPEEELCSSLIFHL---GKMRAHSEALSVY 123
M R G P+ +SLI+ G+MR EAL ++
Sbjct: 256 DRMERGGVSPDIVTYNSLIYGFCREGRMR---EALRLF 290
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/107 (22%), Positives = 50/107 (46%), Gaps = 2/107 (1%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I FCR G E +L + + V +++ YCR D+E + + ++
Sbjct: 273 LIYGFCREGRMREALRLFREINGATPNH--VTYTTLIDGYCRVNDLEEALRLREVMEVEG 330
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLI 107
+ P T++ +++ C+E A R + +M + +P+ C++LI
Sbjct: 331 LHPGVVTYNSILRKLCEEGKIKDANRLLNEMSERKVEPDNVTCNTLI 377
Score = 41.2 bits (95), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 28/107 (26%), Positives = 47/107 (43%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I +CR EE +L E + VV NS+L C G ++ ++ ++ E
Sbjct: 306 LIDGYCRVNDLEEALRLREVMEVEGLHPGVVTYNSILRKLCEEGKIKDANRLLNEMSERK 365
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLI 107
+ PD T + LI +CK A + M G +P++ +LI
Sbjct: 366 VEPDNVTCNTLINAYCKIGDMGSAMKVKKKMLEAGLKPDQFTFKALI 412
>gi|225451899|ref|XP_002279045.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g38730-like [Vitis vinifera]
Length = 590
Score = 55.5 bits (132), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 50/107 (46%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ C G ++ +L + + + D V N+++ AYC+ GDM S M V +K+ E
Sbjct: 341 ILRKLCEEGKIKDANRLLNEMSERKVEPDNVTCNTLINAYCKIGDMGSAMKVKKKMLEAG 400
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLI 107
+ PD TF LI FCK A + +M G P S L+
Sbjct: 401 LKPDQFTFKALIHGFCKLHEVDSAKEFLFEMLDAGFSPSYSTYSWLV 447
Score = 53.5 bits (127), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/154 (24%), Positives = 72/154 (46%), Gaps = 2/154 (1%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I A C+SG E+ +QL + E+++ D+ N+++ YC+ G + + +++
Sbjct: 203 LIHACCKSGDVEKAEQLLNEMESRFIFPDLFTYNTLISLYCKKGMHYEALGIQDRMERGG 262
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+SPD T++ LI FC+E A R +++ G P ++LI ++ EAL
Sbjct: 263 VSPDIVTYNSLIYGFCREGRMREALRLFREIN--GATPNHVTYTTLIDGYCRVNDLEEAL 320
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLKDA 154
+ ++ + IL L +KDA
Sbjct: 321 RLREVMEVEGLHPGVVTYNSILRKLCEEGKIKDA 354
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 53/98 (54%), Gaps = 6/98 (6%)
Query: 29 DVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYMLAYRTM 88
++ + N ++ A C++GD+E ++ +++ I PD T++ LI +CK+ M+ A
Sbjct: 196 NIHIFNVLIHACCKSGDVEKAEQLLNEMESRFIFPDLFTYNTLISLYCKKGMHYEALGIQ 255
Query: 89 VDMHRKGHQPEEELCSSLIFHL---GKMRAHSEALSVY 123
M R G P+ +SLI+ G+MR EAL ++
Sbjct: 256 DRMERGGVSPDIVTYNSLIYGFCREGRMR---EALRLF 290
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/107 (22%), Positives = 50/107 (46%), Gaps = 2/107 (1%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I FCR G E +L + + V +++ YCR D+E + + ++
Sbjct: 273 LIYGFCREGRMREALRLFREINGATPNH--VTYTTLIDGYCRVNDLEEALRLREVMEVEG 330
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLI 107
+ P T++ +++ C+E A R + +M + +P+ C++LI
Sbjct: 331 LHPGVVTYNSILRKLCEEGKIKDANRLLNEMSERKVEPDNVTCNTLI 377
Score = 41.2 bits (95), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 28/107 (26%), Positives = 47/107 (43%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I +CR EE +L E + VV NS+L C G ++ ++ ++ E
Sbjct: 306 LIDGYCRVNDLEEALRLREVMEVEGLHPGVVTYNSILRKLCEEGKIKDANRLLNEMSERK 365
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLI 107
+ PD T + LI +CK A + M G +P++ +LI
Sbjct: 366 VEPDNVTCNTLINAYCKIGDMGSAMKVKKKMLEAGLKPDQFTFKALI 412
>gi|449476143|ref|XP_004154653.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At5g01110-like [Cucumis sativus]
Length = 749
Score = 55.5 bits (132), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 30/112 (26%), Positives = 58/112 (51%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+A+CR G EE QL F ++ + ++ N++L C+ G + V+ ++ +L
Sbjct: 298 LINAYCREGLVEEAFQLLNSFSSRGMEPGLLTYNAILYGLCKIGKYDRAKDVLIEMLQLG 357
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGK 112
++P+ T++ L+ C+ + A +M R+G P+ SSLI L +
Sbjct: 358 LTPNAATYNTLLVEICRRDNILEAQEIFDEMSRRGVLPDLVSFSSLIGVLAR 409
Score = 52.4 bits (124), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 32/137 (23%), Positives = 62/137 (45%), Gaps = 2/137 (1%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
M++A C+ FE D E K D+V N+++ AYCR G +E ++
Sbjct: 263 MVNALCKDRKFENVMFFLSDMEGKGVFADIVTYNTLINAYCREGLVEEAFQLLNSFSSRG 322
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ P T++ ++ CK Y A +++M + G P ++L+ + + EA
Sbjct: 323 MEPGLLTYNAILYGLCKIGKYDRAKDVLIEMLQLGLTPNAATYNTLLVEICRRDNILEAQ 382
Query: 121 SVYNMLRYSKRSMCKAL 137
+++ + S+R + L
Sbjct: 383 EIFDEM--SRRGVLPDL 397
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 48/97 (49%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+++ FC SG E L K + ++V N+++ YCR+GDM + K+
Sbjct: 578 VLNGFCSSGLLPEALNLCDQMLEKGIRPNLVTCNTLIKGYCRSGDMPKAYEYLSKMISNG 637
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQ 97
I PD +++ LI + KE A+ + +M ++G Q
Sbjct: 638 IIPDSFSYNTLIDGYLKEANLEKAFILINEMEKRGLQ 674
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/102 (23%), Positives = 50/102 (49%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I + + E+ L + E + +++++ N +L +C G M+ V+RK+ E+
Sbjct: 648 LIDGYLKEANLEKAFILINEMEKRGLQFNIITYNLILNGFCAEGKMQEAEQVLRKMIEIG 707
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEEL 102
I+PD T+ LI + A+R +M ++G P++
Sbjct: 708 INPDGATYSSLINGHVSQDNMKEAFRFHDEMLQRGLVPDDRF 749
Score = 44.7 bits (104), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 27/107 (25%), Positives = 49/107 (45%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I FCR+G + ++ + A+ DVV N+ L C+ + ++ E
Sbjct: 438 LIDGFCRNGALSDALKMRDEMLARGCFMDVVTYNTFLNGLCKKKMFADADMLFNEMVERG 497
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLI 107
+ PD+ TF LI+ +CK+ A M R +P++ ++LI
Sbjct: 498 MVPDFYTFTTLIRGYCKDGNMDKALNLFEAMVRTNLKPDKVTYNTLI 544
Score = 44.3 bits (103), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 25/122 (20%), Positives = 58/122 (47%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ R+G + ++ G+ + +V LN M+ A C+ E+VM + ++
Sbjct: 228 LLGGLVRTGWVDLAWEIYGEVVRGGIELNVYTLNIMVNALCKDRKFENVMFFLSDMEGKG 287
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ D T++ LI +C+E + A++ + +G +P +++++ L K+ + A
Sbjct: 288 VFADIVTYNTLINAYCREGLVEEAFQLLNSFSSRGMEPGLLTYNAILYGLCKIGKYDRAK 347
Query: 121 SV 122
V
Sbjct: 348 DV 349
Score = 42.0 bits (97), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 27/107 (25%), Positives = 50/107 (46%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I FC++G K+L D K D + ++L +C +G + +++ ++ E
Sbjct: 543 LIDGFCKAGEMGRAKELWDDMIRKDIIPDHISYGTVLNGFCSSGLLPEALNLCDQMLEKG 602
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLI 107
I P+ T + LIK +C+ AY + M G P+ ++LI
Sbjct: 603 IRPNLVTCNTLIKGYCRSGDMPKAYEYLSKMISNGIIPDSFSYNTLI 649
Score = 41.2 bits (95), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 27/110 (24%), Positives = 49/110 (44%), Gaps = 6/110 (5%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYD---KYDVVLLNSMLCAYCRTGDMESVMHVMRKLD 57
+I +C+ G ++ L FEA K D V N+++ +C+ G+M + +
Sbjct: 508 LIRGYCKDGNMDKALNL---FEAMVRTNLKPDKVTYNTLIDGFCKAGEMGRAKELWDDMI 564
Query: 58 ELAISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLI 107
I PD+ ++ ++ FC + A M KG +P C++LI
Sbjct: 565 RKDIIPDHISYGTVLNGFCSSGLLPEALNLCDQMLEKGIRPNLVTCNTLI 614
Score = 40.0 bits (92), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 22/98 (22%), Positives = 42/98 (42%)
Query: 2 ISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAI 61
++ C+ F + L + + D +++ YC+ G+M+ +++ + +
Sbjct: 474 LNGLCKKKMFADADMLFNEMVERGMVPDFYTFTTLIRGYCKDGNMDKALNLFEAMVRTNL 533
Query: 62 SPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPE 99
PD T++ LI FCK A DM RK P+
Sbjct: 534 KPDKVTYNTLIDGFCKAGEMGRAKELWDDMIRKDIIPD 571
>gi|356497979|ref|XP_003517833.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Glycine max]
Length = 595
Score = 55.5 bits (132), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 32/126 (25%), Positives = 61/126 (48%)
Query: 29 DVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYMLAYRTM 88
++V S++ +C +M M+ + ++ + P+ T++ LI FCK + A
Sbjct: 357 NIVTYTSLIHGWCEIKNMNKAMYFLGEMVNNGLDPNIVTWNTLIGGFCKAGKPVAAKELF 416
Query: 89 VDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVYNMLRYSKRSMCKALHEKILHILISG 148
MH+ G P+ + C+ ++ L K HSEA+S++ L + ++ IL+ + S
Sbjct: 417 FVMHKHGQLPDLQTCAIILDGLFKCHFHSEAMSLFRELEKMNSDLDIIIYSIILNGMCSS 476
Query: 149 KLLKDA 154
L DA
Sbjct: 477 GKLNDA 482
Score = 39.7 bits (91), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 31/132 (23%), Positives = 55/132 (41%), Gaps = 3/132 (2%)
Query: 12 EETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHIL 71
E L + E D+++ + +L C +G + + + L + D T++I+
Sbjct: 445 SEAMSLFRELEKMNSDLDIIIYSIILNGMCSSGKLNDALELFSYLSSKGVKIDVVTYNIM 504
Query: 72 IKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSV-YNMLRYSK 130
I CKE + A ++ M G P+E C+ +F G +R + + S Y M K
Sbjct: 505 INGLCKEGLLDDAEDLLMKMEENGCPPDE--CTYNVFVQGLLRRYEISKSTKYLMFMKGK 562
Query: 131 RSMCKALHEKIL 142
A K+L
Sbjct: 563 GFRANATTTKLL 574
Score = 38.1 bits (87), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 18/73 (24%), Positives = 37/73 (50%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+++ C SG + +L +K K DVV N M+ C+ G ++ ++ K++E
Sbjct: 469 ILNGMCSSGKLNDALELFSYLSSKGVKIDVVTYNIMINGLCKEGLLDDAEDLLMKMEENG 528
Query: 61 ISPDYNTFHILIK 73
PD T+++ ++
Sbjct: 529 CPPDECTYNVFVQ 541
Score = 36.6 bits (83), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 26/126 (20%), Positives = 51/126 (40%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ C+ G E + DV N+++ C+ G + + ++
Sbjct: 189 IINGLCKVGHSSAALSYLKKMEEQNCNLDVTAYNAVVDGLCKDGMVFEAWDLFSQMTGKG 248
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
I PD T++ LI C + A + +M RKG P+ + + + K S A
Sbjct: 249 IQPDLFTYNCLIHGLCNFDRWKEAAPLLANMMRKGIMPDVQTFNVIGGRFLKTGMISRAK 308
Query: 121 SVYNML 126
S+++ +
Sbjct: 309 SIFSFM 314
>gi|226493231|ref|NP_001140656.1| hypothetical protein [Zea mays]
gi|194700420|gb|ACF84294.1| unknown [Zea mays]
gi|414587025|tpg|DAA37596.1| TPA: hypothetical protein ZEAMMB73_567962 [Zea mays]
Length = 598
Score = 55.5 bits (132), Expect = 8e-06, Method: Composition-based stats.
Identities = 35/144 (24%), Positives = 66/144 (45%), Gaps = 3/144 (2%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+IS C G + +L + ++ K D+V N++L C E +M K+ +
Sbjct: 344 VISGMCEQGNVDSALELLSNMQSFGCKPDIVTYNTVLKGLCSADRWEDAEELMIKMSQND 403
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
PD +TF+ +I ++C++ + + A+ M KG P S++I L K +AL
Sbjct: 404 RLPDNSTFNTIISFWCQKGLILQAFEVFKQMPEKGCNPNSTTYSTIIGGLTKAGKMEQAL 463
Query: 121 SVYNMLR---YSKRSMCKALHEKI 141
+ N + ++ M + L E +
Sbjct: 464 ELLNEMANKGFNTDKMYRVLTESL 487
Score = 44.7 bits (104), Expect = 0.012, Method: Composition-based stats.
Identities = 23/98 (23%), Positives = 46/98 (46%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ +CR+G E+ +++ G A N ++ A C G + + V+ +
Sbjct: 134 LVDGYCRAGLLEDARRVVGGMPAHVQASSAYAHNPLIHALCERGRVADALVVLDGMLCRG 193
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQP 98
+PD T++IL++ CK + Y A + M +G +P
Sbjct: 194 CAPDVVTYNILLQAACKGRGYRQALELIDFMRAEGCEP 231
Score = 37.4 bits (85), Expect = 2.3, Method: Composition-based stats.
Identities = 22/107 (20%), Positives = 50/107 (46%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ A C+ + + +L A+ + + V N ++ A CR GD++ ++ L
Sbjct: 204 LLQAACKGRGYRQALELIDFMRAEGCEPNNVTYNVIIDAMCREGDVDQARELLNSLPSRG 263
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLI 107
P+ ++ ++K FC + ++ A + +M R+ P E + +I
Sbjct: 264 CKPNTVNYNTVLKGFCSIERWVDADEILDEMVRENCPPNEATLNVII 310
>gi|168055632|ref|XP_001779828.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162668740|gb|EDQ55341.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 730
Score = 55.5 bits (132), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 43/149 (28%), Positives = 66/149 (44%), Gaps = 10/149 (6%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++SAF R+G ++ +K + DV S+L AY R G +E M + ++
Sbjct: 264 LLSAFGRAGLCNAAAEMKDSMVSKGIEPDVFTYTSLLSAYSRAGKVEQAMEIYNQMRTSN 323
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+P+ TF+ LI K K + DM G +P+ +SL+ GK +SE L
Sbjct: 324 CTPNSFTFNALIGMHGKNKNFSEMMVIFEDMQACGVEPDIVTWNSLLGAFGKNGMYSEVL 383
Query: 121 SVYNMLRYSKRSMCKALHEK---ILHILI 146
V+ R M KA E +ILI
Sbjct: 384 KVF-------RGMKKAGFEPDKATFNILI 405
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/124 (20%), Positives = 57/124 (45%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++SA+ R+G E+ ++ + N+++ + + + +M + +
Sbjct: 299 LLSAYSRAGKVEQAMEIYNQMRTSNCTPNSFTFNALIGMHGKNKNFSEMMVIFEDMQACG 358
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ PD T++ L+ F K MY + M + G +P++ + LI G+ + +AL
Sbjct: 359 VEPDIVTWNSLLGAFGKNGMYSEVLKVFRGMKKAGFEPDKATFNILIEAYGRCGSSDQAL 418
Query: 121 SVYN 124
S+Y+
Sbjct: 419 SIYD 422
Score = 43.1 bits (100), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 24/113 (21%), Positives = 52/113 (46%)
Query: 29 DVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYMLAYRTM 88
D+V N+++ +Y + G + S + ++ I PD T++ + + M+ A +
Sbjct: 607 DLVSYNTVIFSYSKHGQLSSATRIFHEMVSNGIQPDSFTYNTFVGCYVNGGMFPEALSVV 666
Query: 89 VDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVYNMLRYSKRSMCKALHEKI 141
MH+ G +P+E +L+ K+ E + ++ S + KA + +I
Sbjct: 667 KHMHKTGCKPDEVTYRTLVDAYCKIGKFEEVERILKFIKSSDPNFSKAAYRRI 719
Score = 40.8 bits (94), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 29/126 (23%), Positives = 56/126 (44%), Gaps = 1/126 (0%)
Query: 6 CRSGCF-EETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPD 64
C SG EE +L ++ D V N++L Y + G +V+++++ P+
Sbjct: 198 CASGSLCEEATELFTQMKSSNCTPDRVTYNALLDVYGKAGWYNEAANVLKEMESAGCLPN 257
Query: 65 YNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVYN 124
T++ L+ F + + A M KG +P+ +SL+ + +A+ +YN
Sbjct: 258 IVTYNELLSAFGRAGLCNAAAEMKDSMVSKGIEPDVFTYTSLLSAYSRAGKVEQAMEIYN 317
Query: 125 MLRYSK 130
+R S
Sbjct: 318 QMRTSN 323
Score = 39.3 bits (90), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 27/131 (20%), Positives = 54/131 (41%)
Query: 29 DVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYMLAYRTM 88
D N+M+ Y + G M+ L + PD T++ L+ + +E MY T+
Sbjct: 537 DTSTFNAMISMYGKKGMMDKATDTFALLRSTGLEPDVVTYNCLMGMYGREGMYRKCEATL 596
Query: 89 VDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVYNMLRYSKRSMCKALHEKILHILISG 148
+ G P+ +++IF K S A +++ + + + + ++G
Sbjct: 597 RECMAAGQTPDLVSYNTVIFSYSKHGQLSSATRIFHEMVSNGIQPDSFTYNTFVGCYVNG 656
Query: 149 KLLKDAYIVVK 159
+ +A VVK
Sbjct: 657 GMFPEALSVVK 667
Score = 38.5 bits (88), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 23/108 (21%), Positives = 53/108 (49%), Gaps = 2/108 (1%)
Query: 1 MISAFCRSGCFEET-KQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDEL 59
++ AF ++G + E K G +A ++ D N ++ AY R G + + + + +
Sbjct: 369 LLGAFGKNGMYSEVLKVFRGMKKAGFEP-DKATFNILIEAYGRCGSSDQALSIYDGMLQA 427
Query: 60 AISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLI 107
+PD TF+ L+ +E + A + +++R ++P + +S++
Sbjct: 428 GCTPDLATFNTLLAALAREGRWEHAELILDELNRSSYKPNDIAYASML 475
>gi|359474768|ref|XP_002270963.2| PREDICTED: pentatricopeptide repeat-containing protein At4g19440,
chloroplastic [Vitis vinifera]
Length = 1022
Score = 55.1 bits (131), Expect = 8e-06, Method: Composition-based stats.
Identities = 29/123 (23%), Positives = 61/123 (49%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I +C+ G + ++ GD +K + V LNS++ +C+ G ME ++ ++
Sbjct: 424 LIDGYCKMGNLGDALRIRGDMVSKGINPNSVTLNSIIQGFCKIGQMEQAECILEEMLSRG 483
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
S + F +I + C + A R + +M + +P + L ++L+ L K HS+A+
Sbjct: 484 FSINPGAFTTIIHWLCMNSRFESALRFLREMLLRNMRPNDGLLTTLVGGLCKEGKHSDAV 543
Query: 121 SVY 123
++
Sbjct: 544 ELW 546
Score = 46.6 bits (109), Expect = 0.004, Method: Composition-based stats.
Identities = 27/124 (21%), Positives = 62/124 (50%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ C+ G + +L K ++V N+++ C+TG+M+ + +++K+ E
Sbjct: 529 LVGGLCKEGKHSDAVELWFRLLEKGFGANLVTTNALIHGLCKTGNMQEAVRLLKKMLERG 588
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
D T++ LI CKE ++ +M ++G +P+ + LI + ++ EA+
Sbjct: 589 FVLDKITYNTLISGCCKEGKVEEGFKLRGEMVKQGIEPDTFTYNLLIHGMCRIGKLDEAV 648
Query: 121 SVYN 124
+++N
Sbjct: 649 NLWN 652
Score = 46.6 bits (109), Expect = 0.004, Method: Composition-based stats.
Identities = 31/121 (25%), Positives = 57/121 (47%)
Query: 2 ISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAI 61
I+AFC+ G E+ QL D E +VV N+++ C+ G+++ K+ + +
Sbjct: 320 INAFCKGGKVEDAIQLFFDMEKLGVSPNVVTYNNLIHGLCKHGNLDEAFRFKEKMVKDGV 379
Query: 62 SPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEALS 121
+ T+ +LI K + + A + + KG P E + ++LI KM +AL
Sbjct: 380 NATLITYSVLINGLMKLEKFNEANSVLKETLEKGFTPNEVVYNTLIDGYCKMGNLGDALR 439
Query: 122 V 122
+
Sbjct: 440 I 440
Score = 43.5 bits (101), Expect = 0.031, Method: Composition-based stats.
Identities = 28/94 (29%), Positives = 47/94 (50%)
Query: 29 DVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYMLAYRTM 88
DV L ++ + A+C+ G +E + + +++L +SP+ T++ LI CK A+R
Sbjct: 312 DVYLFSTAINAFCKGGKVEDAIQLFFDMEKLGVSPNVVTYNNLIHGLCKHGNLDEAFRFK 371
Query: 89 VDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSV 122
M + G S LI L K+ +EA SV
Sbjct: 372 EKMVKDGVNATLITYSVLINGLMKLEKFNEANSV 405
Score = 43.1 bits (100), Expect = 0.037, Method: Composition-based stats.
Identities = 24/99 (24%), Positives = 49/99 (49%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C G E+ K L + + +VV +++ YC+ G M+ V++V++++
Sbjct: 739 LIHGMCNIGRMEDAKCLIDEMRKEGLLPNVVCYTALIGGYCKLGQMDKVVNVLQEMSSYD 798
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPE 99
I P+ T+ ++I + K A + + +M KG P+
Sbjct: 799 IHPNKITYTVMIDGYSKSGDMKTAAKLLHEMVGKGIVPD 837
Score = 37.7 bits (86), Expect = 1.5, Method: Composition-based stats.
Identities = 19/79 (24%), Positives = 42/79 (53%), Gaps = 2/79 (2%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKY-DVVLLNSMLCAYCRTGDMESVMHVMRKLDEL 59
+I +C+ G ++ + + + YD + + + M+ Y ++GDM++ ++ ++
Sbjct: 774 LIGGYCKLGQMDKVVNVLQEMSS-YDIHPNKITYTVMIDGYSKSGDMKTAAKLLHEMVGK 832
Query: 60 AISPDYNTFHILIKYFCKE 78
I PD T+++L FCKE
Sbjct: 833 GIVPDTVTYNVLTNGFCKE 851
Score = 37.7 bits (86), Expect = 1.6, Method: Composition-based stats.
Identities = 27/158 (17%), Positives = 69/158 (43%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+IS C+ G EE +L G+ + + D N ++ CR G ++ +++ +
Sbjct: 599 LISGCCKEGKVEEGFKLRGEMVKQGIEPDTFTYNLLIHGMCRIGKLDEAVNLWNECKSRD 658
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ P+ T+ ++I +CK + ++ + + + ++LI + EA
Sbjct: 659 LVPNVYTYGVMIDGYCKADKIEEGEKLFTELLTQNLELNSVVYNTLIRAYCRNGNTVEAF 718
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLKDAYIVV 158
+++ +R A + ++H + + ++DA ++
Sbjct: 719 KLHDDMRSKGIPPTTATYSSLIHGMCNIGRMEDAKCLI 756
>gi|296085490|emb|CBI29222.3| unnamed protein product [Vitis vinifera]
Length = 826
Score = 55.1 bits (131), Expect = 9e-06, Method: Composition-based stats.
Identities = 29/123 (23%), Positives = 61/123 (49%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I +C+ G + ++ GD +K + V LNS++ +C+ G ME ++ ++
Sbjct: 357 LIDGYCKMGNLGDALRIRGDMVSKGINPNSVTLNSIIQGFCKIGQMEQAECILEEMLSRG 416
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
S + F +I + C + A R + +M + +P + L ++L+ L K HS+A+
Sbjct: 417 FSINPGAFTTIIHWLCMNSRFESALRFLREMLLRNMRPNDGLLTTLVGGLCKEGKHSDAV 476
Query: 121 SVY 123
++
Sbjct: 477 ELW 479
Score = 46.2 bits (108), Expect = 0.004, Method: Composition-based stats.
Identities = 27/124 (21%), Positives = 62/124 (50%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ C+ G + +L K ++V N+++ C+TG+M+ + +++K+ E
Sbjct: 462 LVGGLCKEGKHSDAVELWFRLLEKGFGANLVTTNALIHGLCKTGNMQEAVRLLKKMLERG 521
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
D T++ LI CKE ++ +M ++G +P+ + LI + ++ EA+
Sbjct: 522 FVLDKITYNTLISGCCKEGKVEEGFKLRGEMVKQGIEPDTFTYNLLIHGMCRIGKLDEAV 581
Query: 121 SVYN 124
+++N
Sbjct: 582 NLWN 585
Score = 46.2 bits (108), Expect = 0.004, Method: Composition-based stats.
Identities = 31/121 (25%), Positives = 57/121 (47%)
Query: 2 ISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAI 61
I+AFC+ G E+ QL D E +VV N+++ C+ G+++ K+ + +
Sbjct: 253 INAFCKGGKVEDAIQLFFDMEKLGVSPNVVTYNNLIHGLCKHGNLDEAFRFKEKMVKDGV 312
Query: 62 SPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEALS 121
+ T+ +LI K + + A + + KG P E + ++LI KM +AL
Sbjct: 313 NATLITYSVLINGLMKLEKFNEANSVLKETLEKGFTPNEVVYNTLIDGYCKMGNLGDALR 372
Query: 122 V 122
+
Sbjct: 373 I 373
Score = 43.1 bits (100), Expect = 0.033, Method: Composition-based stats.
Identities = 28/94 (29%), Positives = 47/94 (50%)
Query: 29 DVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYMLAYRTM 88
DV L ++ + A+C+ G +E + + +++L +SP+ T++ LI CK A+R
Sbjct: 245 DVYLFSTAINAFCKGGKVEDAIQLFFDMEKLGVSPNVVTYNNLIHGLCKHGNLDEAFRFK 304
Query: 89 VDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSV 122
M + G S LI L K+ +EA SV
Sbjct: 305 EKMVKDGVNATLITYSVLINGLMKLEKFNEANSV 338
Score = 43.1 bits (100), Expect = 0.040, Method: Composition-based stats.
Identities = 24/99 (24%), Positives = 49/99 (49%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C G E+ K L + + +VV +++ YC+ G M+ V++V++++
Sbjct: 672 LIHGMCNIGRMEDAKCLIDEMRKEGLLPNVVCYTALIGGYCKLGQMDKVVNVLQEMSSYD 731
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPE 99
I P+ T+ ++I + K A + + +M KG P+
Sbjct: 732 IHPNKITYTVMIDGYSKSGDMKTAAKLLHEMVGKGIVPD 770
Score = 39.7 bits (91), Expect = 0.44, Method: Composition-based stats.
Identities = 24/110 (21%), Positives = 55/110 (50%), Gaps = 3/110 (2%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKY-DVVLLNSMLCAYCRTGDMESVMHVMRKLDEL 59
+I +C+ G ++ + + + YD + + + M+ Y ++GDM++ ++ ++
Sbjct: 707 LIGGYCKLGQMDKVVNVLQEMSS-YDIHPNKITYTVMIDGYSKSGDMKTAAKLLHEMVGK 765
Query: 60 AISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFH 109
I PD T+++L FCKE ++ M ++G P +E+ + + H
Sbjct: 766 GIVPDTVTYNVLTNGFCKEGKIEEGFKICDYMSQEG-LPLDEITYTTLVH 814
Score = 37.7 bits (86), Expect = 1.8, Method: Composition-based stats.
Identities = 27/158 (17%), Positives = 69/158 (43%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+IS C+ G EE +L G+ + + D N ++ CR G ++ +++ +
Sbjct: 532 LISGCCKEGKVEEGFKLRGEMVKQGIEPDTFTYNLLIHGMCRIGKLDEAVNLWNECKSRD 591
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ P+ T+ ++I +CK + ++ + + + ++LI + EA
Sbjct: 592 LVPNVYTYGVMIDGYCKADKIEEGEKLFTELLTQNLELNSVVYNTLIRAYCRNGNTVEAF 651
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLKDAYIVV 158
+++ +R A + ++H + + ++DA ++
Sbjct: 652 KLHDDMRSKGIPPTTATYSSLIHGMCNIGRMEDAKCLI 689
>gi|449438705|ref|XP_004137128.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15630,
mitochondrial-like [Cucumis sativus]
Length = 628
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/118 (24%), Positives = 58/118 (49%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ CR G EE ++L + + + K D + N+++ Y R GD++ V ++ +
Sbjct: 507 IMQGHCREGKVEEARELFDEMKRRGIKPDHISFNTLISGYSRRGDIKDAFRVRNEMLDTG 566
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSE 118
+P T++ L++ CK + LA + +M KG P++ +LI + K+ E
Sbjct: 567 FNPTVLTYNALVQGLCKNQEGDLAEELLKEMVSKGMTPDDTTYFTLIEGIAKVNIPDE 624
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/107 (27%), Positives = 53/107 (49%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
MI+ C+ G ++ K G E K ++V N+++ YC +G +E+ ++ +
Sbjct: 227 MINVLCKEGKLKKAKDFVGHMETSGVKPNIVTYNTIVHGYCSSGRVEAADAILTTMKRQK 286
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLI 107
I PD T+ LI CK+ A + +M +KG +P + ++LI
Sbjct: 287 IEPDSFTYGSLISGMCKQGRLEEASKIFEEMVQKGLRPSAVIYNTLI 333
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 21/96 (21%), Positives = 49/96 (51%)
Query: 29 DVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYMLAYRTM 88
DV++ N+++ +C +++ +++ +D + + PD TF+ +++ C+E A
Sbjct: 465 DVIMFNALIDGHCSNSNVKGAFELLKDMDRMKVPPDEVTFNTIMQGHCREGKVEEARELF 524
Query: 89 VDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVYN 124
+M R+G +P+ ++LI + +A V N
Sbjct: 525 DEMKRRGIKPDHISFNTLISGYSRRGDIKDAFRVRN 560
Score = 40.4 bits (93), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 33/158 (20%), Positives = 66/158 (41%), Gaps = 35/158 (22%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDME------------- 47
+IS C+ G EE ++ + K + V+ N+++ +C G+++
Sbjct: 297 LISGMCKQGRLEEASKIFEEMVQKGLRPSAVIYNTLIDGFCNKGNLDMASAYKDEMLKKG 356
Query: 48 ---------SVMHVM-------------RKLDELAISPDYNTFHILIKYFCKEKMYMLAY 85
S++H + +++ E ISPD T++ILI +C+ A+
Sbjct: 357 ISPTMSTYNSLIHALFMEQRTDEAECMIKEIQEKGISPDAITYNILINGYCRCANAKKAF 416
Query: 86 RTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVY 123
+M G +P ++ +SL+ L K EA ++
Sbjct: 417 LLHDEMLASGIKPTKKTYTSLLHVLSKKNRMKEADDLF 454
Score = 40.0 bits (92), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 22/98 (22%), Positives = 42/98 (42%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C + + +L D + D V N+++ +CR G +E + ++
Sbjct: 472 LIDGHCSNSNVKGAFELLKDMDRMKVPPDEVTFNTIMQGHCREGKVEEARELFDEMKRRG 531
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQP 98
I PD+ +F+ LI + + A+R +M G P
Sbjct: 532 IKPDHISFNTLISGYSRRGDIKDAFRVRNEMLDTGFNP 569
Score = 37.0 bits (84), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 23/110 (20%), Positives = 46/110 (41%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ +C SG E + + + + D S++ C+ G +E + ++ +
Sbjct: 262 IVHGYCSSGRVEAADAILTTMKRQKIEPDSFTYGSLISGMCKQGRLEEASKIFEEMVQKG 321
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHL 110
+ P ++ LI FC + +A +M +KG P +SLI L
Sbjct: 322 LRPSAVIYNTLIDGFCNKGNLDMASAYKDEMLKKGISPTMSTYNSLIHAL 371
>gi|449523421|ref|XP_004168722.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15630,
mitochondrial-like [Cucumis sativus]
Length = 628
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/118 (24%), Positives = 58/118 (49%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ CR G EE ++L + + + K D + N+++ Y R GD++ V ++ +
Sbjct: 507 IMQGHCREGKVEEARELFDEMKRRGIKPDHISFNTLISGYSRRGDIKDAFRVRNEMLDTG 566
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSE 118
+P T++ L++ CK + LA + +M KG P++ +LI + K+ E
Sbjct: 567 FNPTVLTYNALVQGLCKNQEGDLAEELLKEMVSKGMTPDDTTYFTLIEGIAKVNIPDE 624
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/107 (27%), Positives = 53/107 (49%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
MI+ C+ G ++ K G E K ++V N+++ YC +G +E+ ++ +
Sbjct: 227 MINVLCKEGKLKKAKDFVGHMETSGVKPNIVTYNTIVHGYCSSGRVEAADAILTTMKRQK 286
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLI 107
I PD T+ LI CK+ A + +M +KG +P + ++LI
Sbjct: 287 IEPDSFTYGSLISGMCKQGRLEEASKIFEEMVQKGLRPSAVIYNTLI 333
Score = 44.7 bits (104), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 20/96 (20%), Positives = 48/96 (50%)
Query: 29 DVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYMLAYRTM 88
D ++ N+++ +C +++ +++ +D + + PD TF+ +++ C+E A
Sbjct: 465 DAIMFNALIDGHCSNSNVKGAFELLKDMDRMKVPPDEVTFNTIMQGHCREGKVEEARELF 524
Query: 89 VDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVYN 124
+M R+G +P+ ++LI + +A V N
Sbjct: 525 DEMKRRGIKPDHISFNTLISGYSRRGDIKDAFRVRN 560
Score = 40.4 bits (93), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 33/158 (20%), Positives = 66/158 (41%), Gaps = 35/158 (22%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDME------------- 47
+IS C+ G EE ++ + K + V+ N+++ +C G+++
Sbjct: 297 LISGMCKQGRLEEASKIFEEMVQKGLRPSAVIYNTLIDGFCNKGNLDMASAYKDEMLKKG 356
Query: 48 ---------SVMHVM-------------RKLDELAISPDYNTFHILIKYFCKEKMYMLAY 85
S++H + +++ E ISPD T++ILI +C+ A+
Sbjct: 357 ISPTMSTYNSLIHALFMEQRTDEAECMIKEIQEKGISPDAITYNILINGYCRCANAKKAF 416
Query: 86 RTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVY 123
+M G +P ++ +SL+ L K EA ++
Sbjct: 417 LLHDEMLASGIKPTKKTYTSLLHVLSKKNRMKEADDLF 454
Score = 40.0 bits (92), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 22/98 (22%), Positives = 42/98 (42%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C + + +L D + D V N+++ +CR G +E + ++
Sbjct: 472 LIDGHCSNSNVKGAFELLKDMDRMKVPPDEVTFNTIMQGHCREGKVEEARELFDEMKRRG 531
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQP 98
I PD+ +F+ LI + + A+R +M G P
Sbjct: 532 IKPDHISFNTLISGYSRRGDIKDAFRVRNEMLDTGFNP 569
Score = 36.6 bits (83), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 23/110 (20%), Positives = 46/110 (41%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ +C SG E + + + + D S++ C+ G +E + ++ +
Sbjct: 262 IVHGYCSSGRVEAADAILTTMKRQKIEPDSFTYGSLISGMCKQGRLEEASKIFEEMVQKG 321
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHL 110
+ P ++ LI FC + +A +M +KG P +SLI L
Sbjct: 322 LRPSAVIYNTLIDGFCNKGNLDMASAYKDEMLKKGISPTMSTYNSLIHAL 371
>gi|298204410|emb|CBI16890.3| unnamed protein product [Vitis vinifera]
Length = 653
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 50/107 (46%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ C G ++ +L + + + D V N+++ AYC+ GDM S M V +K+ E
Sbjct: 334 ILRKLCEEGKIKDANRLLNEMSERKVEPDNVTCNTLINAYCKIGDMGSAMKVKKKMLEAG 393
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLI 107
+ PD TF LI FCK A + +M G P S L+
Sbjct: 394 LKPDQFTFKALIHGFCKLHEVDSAKEFLFEMLDAGFSPSYSTYSWLV 440
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 45/78 (57%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I A C+SG E+ +QL + E+++ D+ N+++ YC+ G + + +++
Sbjct: 228 LIHACCKSGDVEKAEQLLNEMESRFIFPDLFTYNTLISLYCKKGMHYEALGIQDRMERGG 287
Query: 61 ISPDYNTFHILIKYFCKE 78
+SPD T++ LI FC+E
Sbjct: 288 VSPDIVTYNSLIYGFCRE 305
Score = 45.8 bits (107), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 44/80 (55%)
Query: 29 DVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYMLAYRTM 88
++ + N ++ A C++GD+E ++ +++ I PD T++ LI +CK+ M+ A
Sbjct: 221 NIHIFNVLIHACCKSGDVEKAEQLLNEMESRFIFPDLFTYNTLISLYCKKGMHYEALGIQ 280
Query: 89 VDMHRKGHQPEEELCSSLIF 108
M R G P+ +SLI+
Sbjct: 281 DRMERGGVSPDIVTYNSLIY 300
Score = 45.1 bits (105), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 28/123 (22%), Positives = 57/123 (46%), Gaps = 1/123 (0%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCR-TGDMESVMHVMRKLDEL 59
+IS +C+ G E + E D+V NS++ +CR D+E + + ++
Sbjct: 263 LISLYCKKGMHYEALGIQDRMERGGVSPDIVTYNSLIYGFCREVNDLEEALRLREVMEVE 322
Query: 60 AISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEA 119
+ P T++ +++ C+E A R + +M + +P+ C++LI K+ A
Sbjct: 323 GLHPGVVTYNSILRKLCEEGKIKDANRLLNEMSERKVEPDNVTCNTLINAYCKIGDMGSA 382
Query: 120 LSV 122
+ V
Sbjct: 383 MKV 385
Score = 37.4 bits (85), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 29/108 (26%), Positives = 47/108 (43%), Gaps = 1/108 (0%)
Query: 1 MISAFCRS-GCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDEL 59
+I FCR EE +L E + VV NS+L C G ++ ++ ++ E
Sbjct: 298 LIYGFCREVNDLEEALRLREVMEVEGLHPGVVTYNSILRKLCEEGKIKDANRLLNEMSER 357
Query: 60 AISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLI 107
+ PD T + LI +CK A + M G +P++ +LI
Sbjct: 358 KVEPDNVTCNTLINAYCKIGDMGSAMKVKKKMLEAGLKPDQFTFKALI 405
>gi|147834641|emb|CAN60904.1| hypothetical protein VITISV_016343 [Vitis vinifera]
Length = 580
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/113 (27%), Positives = 56/113 (49%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ CR G EE + L + + + K D + N+++ Y R GD++ V ++ +
Sbjct: 459 LMQGRCREGKVEEARMLLDEMKXRGIKPDHISYNTLISGYGRRGDIKDAFXVRDEMLSIG 518
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKM 113
+P T++ LIK CK + LA + +M KG P++ SLI +G +
Sbjct: 519 FNPTLLTYNALIKCLCKNQEGDLAEELLKEMVNKGISPDDSTYLSLIEGMGNV 571
Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 24/94 (25%), Positives = 51/94 (54%)
Query: 29 DVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYMLAYRTM 88
DV++ N+M+ +C G++E +++++D ++ PD TF+ L++ C+E A +
Sbjct: 417 DVIMFNAMIDGHCANGNVERAFMLLKEMDRKSVPPDEVTFNTLMQGRCREGKVEEARMLL 476
Query: 89 VDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSV 122
+M +G +P+ ++LI G+ +A V
Sbjct: 477 DEMKXRGIKPDHISYNTLISGYGRRGDIKDAFXV 510
Score = 38.5 bits (88), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 26/106 (24%), Positives = 46/106 (43%), Gaps = 14/106 (13%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKY-------DVVLLNSMLCAYCRTGDMESVMHVM 53
+IS C+ G EE L +DK + V N+++ YC GD+E
Sbjct: 249 LISGMCKEGRLEEASGL-------FDKMVEIGLVPNAVTYNTLIDGYCNKGDLERAFSYR 301
Query: 54 RKLDELAISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPE 99
++ + I P +T+++L+ E A + +M +KG P+
Sbjct: 302 DEMVKKGIMPSVSTYNLLVHALFMEGRMGEADDMIKEMRKKGIIPD 347
Score = 37.4 bits (85), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 21/98 (21%), Positives = 43/98 (43%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I + G E +++ K + D S++ C+ G +E + K+ E+
Sbjct: 214 IIHGYSSRGNIEGARRILDAMRVKGIEPDSYTYGSLISGMCKEGRLEEASGLFDKMVEIG 273
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQP 98
+ P+ T++ LI +C + A+ +M +KG P
Sbjct: 274 LVPNAVTYNTLIDGYCNKGDLERAFSYRDEMVKKGIMP 311
>gi|302774757|ref|XP_002970795.1| hypothetical protein SELMODRAFT_441332 [Selaginella moellendorffii]
gi|302806735|ref|XP_002985099.1| hypothetical protein SELMODRAFT_121414 [Selaginella moellendorffii]
gi|300147309|gb|EFJ13974.1| hypothetical protein SELMODRAFT_121414 [Selaginella moellendorffii]
gi|300161506|gb|EFJ28121.1| hypothetical protein SELMODRAFT_441332 [Selaginella moellendorffii]
Length = 543
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 73/165 (44%), Gaps = 19/165 (11%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I FC++G E QL + + + DVV +S++ A C TG++ M R+ E A
Sbjct: 111 LIGGFCKAGDMERAFQLLAEMKERGHSPDVVTHSSIVQALCNTGNLSRAMQYFRESVECA 170
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEA- 119
PD F+IL+ CK A + + +M +G P+ +SLI L K EA
Sbjct: 171 --PDSVLFNILVHGLCKANQLSEARQMIEEMSERGIVPDVVTYNSLIDGLCKSYRMEEAR 228
Query: 120 --------------LSVYNMLRYSK-RSMCKAL-HEKILHILISG 148
L YN L Y ++ C L H+ I ++ SG
Sbjct: 229 QLLETMVKRKVRPNLVTYNTLIYGYCKTGCTGLAHQLIERMIQSG 273
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/148 (22%), Positives = 71/148 (47%), Gaps = 4/148 (2%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ C++ E +Q+ + + DVV NS++ C++ ME ++ + +
Sbjct: 179 LVHGLCKANQLSEARQMIEEMSERGIVPDVVTYNSLIDGLCKSYRMEEARQLLETMVKRK 238
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ P+ T++ LI +CK LA++ + M + G P+ +SLI + +A
Sbjct: 239 VRPNLVTYNTLIYGYCKTGCTGLAHQLIERMIQSGTHPDVVTFNSLISGFCQKSKIDKAC 298
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISG 148
V +++ K+ +C A + ++LISG
Sbjct: 299 EVLHLM---KKGLC-APNLVTYNVLISG 322
Score = 42.4 bits (98), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 27/126 (21%), Positives = 55/126 (43%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I +C++GC QL DVV NS++ +C+ ++ V+ + +
Sbjct: 249 LIYGYCKTGCTGLAHQLIERMIQSGTHPDVVTFNSLISGFCQKSKIDKACEVLHLMKKGL 308
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+P+ T+++LI C A + +M +G P+ +SLI + +A
Sbjct: 309 CAPNLVTYNVLISGLCDAGRANEACELLSEMDGRGILPDIITYNSLIGIFCRNFQIEQAF 368
Query: 121 SVYNML 126
+ N++
Sbjct: 369 QIQNLM 374
Score = 38.9 bits (89), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 32/154 (20%), Positives = 64/154 (41%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+IS C +G E +L + + + D++ NS++ +CR +E + + E
Sbjct: 319 LISGLCDAGRANEACELLSEMDGRGILPDIITYNSLIGIFCRNFQIEQAFQIQNLMVERG 378
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ PD ++ L K + + A+ + +M G P +SL+ L R EA
Sbjct: 379 VIPDGISYCTLAVALLKSERFDEAFALLDNMFDAGAIPNLFTFNSLMEGLCCSRRLDEAR 438
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLKDA 154
+ ++R + +E ++ L + DA
Sbjct: 439 HLLAVMRRVGCDPAASTYEVLVTGLCKAGRVDDA 472
Score = 36.2 bits (82), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 23/126 (18%), Positives = 56/126 (44%), Gaps = 3/126 (2%)
Query: 29 DVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYMLAYRTM 88
++ NS++ C + ++ H++ + + P +T+ +L+ CK A +
Sbjct: 417 NLFTFNSLMEGLCCSRRLDEARHLLAVMRRVGCDPAASTYEVLVTGLCKAGRVDDAKEVL 476
Query: 89 VDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVYNMLRYSKRSMCKALHEKILHILISG 148
V M +G QP +++ L + AL ++ + ++ C ++K+L +
Sbjct: 477 VMMVSEGIQPLVSSSGTIVHTLAREGKQDLALHYFDQVVAAESKACDPSYQKLLEFV--- 533
Query: 149 KLLKDA 154
K+L++
Sbjct: 534 KVLREG 539
>gi|449455685|ref|XP_004145582.1| PREDICTED: pentatricopeptide repeat-containing protein At4g31850,
chloroplastic-like [Cucumis sativus]
Length = 1113
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/120 (25%), Positives = 56/120 (46%), Gaps = 10/120 (8%)
Query: 18 AGDFEAKYDKYDVV----------LLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNT 67
A DF+ + +DV+ N+++C R G +E + ++ ++ + + P T
Sbjct: 380 ARDFDEAFATFDVMRKQGILPNLHTYNTLICGLLRAGRIEDALKLLGTMESVGVQPTAYT 439
Query: 68 FHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVYNMLR 127
++I I YF K A T M KG P C++ ++ L +M EA +++N LR
Sbjct: 440 YNIFIDYFGKSGETGKAVETFEKMKAKGIVPNIVACNASLYSLAEMGRLREAKTMFNGLR 499
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 32/115 (27%), Positives = 55/115 (47%), Gaps = 2/115 (1%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I A C +G E K+L +A K D V+ ++L + GD+++ +++
Sbjct: 303 LIDALCNAGQLENAKELFVKMKANGHKPDQVIYITLLDKFNDFGDLDTFKEFWSQMEADG 362
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRA 115
PD TF IL+ CK + + A+ T M ++G P ++LI G +RA
Sbjct: 363 YMPDVVTFTILVDVLCKARDFDEAFATFDVMRKQGILPNLHTYNTLI--CGLLRA 415
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/130 (25%), Positives = 58/130 (44%), Gaps = 6/130 (4%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYD---KYDVVLLNSMLCAYCRTGDMESVMHVMRKLD 57
+I + G EE +L FE D K + + N ++ Y + GD E+ + +++
Sbjct: 899 LIDGLAKVGRLEEAMRL---FEEMSDYGCKPNCAIFNILINGYGKIGDTETACQLFKRMV 955
Query: 58 ELAISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHS 117
I PD ++ IL+ C A ++ G P+ + +I LGK +
Sbjct: 956 NEGIRPDLKSYTILVDCLCLAGRVDEALYYFNELKSTGLDPDFIAYNRIINGLGKSQRME 1015
Query: 118 EALSVYNMLR 127
EAL++YN +R
Sbjct: 1016 EALALYNEMR 1025
Score = 39.3 bits (90), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 37/147 (25%), Positives = 66/147 (44%), Gaps = 6/147 (4%)
Query: 2 ISAFCRSGCFEETKQLAGDFE---AKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDE 58
I F +SG ET + FE AK ++V N+ L + G + + L E
Sbjct: 444 IDYFGKSG---ETGKAVETFEKMKAKGIVPNIVACNASLYSLAEMGRLREAKTMFNGLRE 500
Query: 59 LAISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSE 118
++PD T+++++K + K A + +M R G +P+ + +SLI L K E
Sbjct: 501 NGLAPDSVTYNMMMKCYSKVGQVDEAVNLLSEMIRNGCEPDVIVVNSLIDSLYKAGRVDE 560
Query: 119 ALSVYNMLRYSKRSMCKALHEKILHIL 145
A +++ ++ K S + +L L
Sbjct: 561 AWQMFDRMKDMKLSPTVVTYNTLLSGL 587
Score = 38.9 bits (89), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 17/66 (25%), Positives = 31/66 (46%)
Query: 42 RTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEE 101
R G ++ + R++D+ PD T+ +LI C A V M GH+P++
Sbjct: 274 RAGKIDEAYEIFRRMDDEGCGPDLVTYTVLIDALCNAGQLENAKELFVKMKANGHKPDQV 333
Query: 102 LCSSLI 107
+ +L+
Sbjct: 334 IYITLL 339
>gi|356518209|ref|XP_003527773.1| PREDICTED: pentatricopeptide repeat-containing protein At4g31850,
chloroplastic-like [Glycine max]
Length = 1113
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/124 (26%), Positives = 60/124 (48%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I A C +G ++ K+L A K D+V +++ + GD+E+V +++
Sbjct: 303 LIDALCAAGKLDKAKELYTKMRASSHKPDLVTYITLMSKFGNYGDLETVKRFWSEMEADG 362
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+PD T+ IL++ CK A+ + M +G P ++LI L +R EAL
Sbjct: 363 YAPDVVTYTILVEALCKSGKVDQAFDMLDVMRVRGIVPNLHTYNTLISGLLNLRRLDEAL 422
Query: 121 SVYN 124
++N
Sbjct: 423 ELFN 426
Score = 40.8 bits (94), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 38/159 (23%), Positives = 63/159 (39%), Gaps = 35/159 (22%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTG------DMESVMHV-- 52
++S F G E K+ + EA DVV ++ A C++G DM VM V
Sbjct: 338 LMSKFGNYGDLETVKRFWSEMEADGYAPDVVTYTILVEALCKSGKVDQAFDMLDVMRVRG 397
Query: 53 -----------------MRKLDE----------LAISPDYNTFHILIKYFCKEKMYMLAY 85
+R+LDE L ++P ++ + I Y+ K A
Sbjct: 398 IVPNLHTYNTLISGLLNLRRLDEALELFNNMESLGVAPTAYSYVLFIDYYGKLGDPEKAL 457
Query: 86 RTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVYN 124
T M ++G P C++ ++ L +M EA ++N
Sbjct: 458 DTFEKMKKRGIMPSIAACNASLYSLAEMGRIREAKDIFN 496
Score = 39.3 bits (90), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 26/123 (21%), Positives = 59/123 (47%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
M+ + ++G ++ +L + ++ + D++++NS++ + G ++ + +L +L
Sbjct: 513 MMKCYSKAGQIDKATKLLTEMLSEGCEPDIIVVNSLIDTLYKAGRVDEAWQMFGRLKDLK 572
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
++P T++ILI KE + A M G P ++L+ L K A AL
Sbjct: 573 LAPTVVTYNILITGLGKEGKLLKALDLFGSMKESGCPPNTVTFNALLDCLCKNDAVDLAL 632
Query: 121 SVY 123
++
Sbjct: 633 KMF 635
Score = 35.8 bits (81), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 19/86 (22%), Positives = 39/86 (45%)
Query: 43 TGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEEL 102
TG ++ +H +L + PD +++++I K + A +M +G PE
Sbjct: 976 TGRVDDAVHYFEELKLTGLDPDTVSYNLMINGLGKSRRLEEALSLFSEMKNRGISPELYT 1035
Query: 103 CSSLIFHLGKMRAHSEALSVYNMLRY 128
++LI H G +A ++ L++
Sbjct: 1036 YNALILHFGNAGMVDQAGKMFEELQF 1061
>gi|225447872|ref|XP_002269015.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15630,
mitochondrial-like [Vitis vinifera]
Length = 656
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/113 (27%), Positives = 56/113 (49%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ CR G EE + L + + + K D + N+++ Y R GD++ V ++ +
Sbjct: 535 LMQGRCREGKVEEARMLLDEMKRRGIKPDHISYNTLISGYGRRGDIKDAFRVRDEMLSIG 594
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKM 113
+P T++ LIK CK + LA + +M KG P++ SLI +G +
Sbjct: 595 FNPTLLTYNALIKCLCKNQEGDLAEELLKEMVNKGISPDDSTYLSLIEGMGNV 647
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/101 (26%), Positives = 54/101 (53%), Gaps = 7/101 (6%)
Query: 29 DVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYMLAYRTM 88
DV++ N+M+ +C G++E +++++D ++ PD TF+ L++ C+E A +
Sbjct: 493 DVIMFNAMVDGHCANGNVERAFMLLKEMDRKSVPPDEVTFNTLMQGRCREGKVEEARMLL 552
Query: 89 VDMHRKGHQPEEELCSSLIFHLGK-------MRAHSEALSV 122
+M R+G +P+ ++LI G+ R E LS+
Sbjct: 553 DEMKRRGIKPDHISYNTLISGYGRRGDIKDAFRVRDEMLSI 593
Score = 42.7 bits (99), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 21/78 (26%), Positives = 38/78 (48%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
M++ C+ G ++ ++ G E K +VV N+++ Y G++E ++ +
Sbjct: 255 MVNVLCKEGKLKKAREFIGFMEGLGFKPNVVSYNTIIHGYSSRGNIEGARRILDAMRVKG 314
Query: 61 ISPDYNTFHILIKYFCKE 78
I PD T+ LI CKE
Sbjct: 315 IEPDSYTYGSLISGMCKE 332
Score = 42.0 bits (97), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 23/98 (23%), Positives = 43/98 (43%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
M+ C +G E L + + K D V N+++ CR G +E ++ ++
Sbjct: 500 MVDGHCANGNVERAFMLLKEMDRKSVPPDEVTFNTLMQGRCREGKVEEARMLLDEMKRRG 559
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQP 98
I PD+ +++ LI + + A+R +M G P
Sbjct: 560 IKPDHISYNTLISGYGRRGDIKDAFRVRDEMLSIGFNP 597
Score = 38.1 bits (87), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 26/106 (24%), Positives = 46/106 (43%), Gaps = 14/106 (13%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKY-------DVVLLNSMLCAYCRTGDMESVMHVM 53
+IS C+ G EE L +DK + V N+++ YC GD+E
Sbjct: 325 LISGMCKEGRLEEASGL-------FDKMVEIGLVPNAVTYNTLIDGYCNKGDLERAFSYR 377
Query: 54 RKLDELAISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPE 99
++ + I P +T+++L+ E A + +M +KG P+
Sbjct: 378 DEMVKKGIMPSVSTYNLLVHALFMEGRMGEADDMIKEMRKKGIIPD 423
Score = 37.0 bits (84), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 21/98 (21%), Positives = 43/98 (43%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I + G E +++ K + D S++ C+ G +E + K+ E+
Sbjct: 290 IIHGYSSRGNIEGARRILDAMRVKGIEPDSYTYGSLISGMCKEGRLEEASGLFDKMVEIG 349
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQP 98
+ P+ T++ LI +C + A+ +M +KG P
Sbjct: 350 LVPNAVTYNTLIDGYCNKGDLERAFSYRDEMVKKGIMP 387
>gi|296081530|emb|CBI20053.3| unnamed protein product [Vitis vinifera]
Length = 634
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/113 (27%), Positives = 56/113 (49%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ CR G EE + L + + + K D + N+++ Y R GD++ V ++ +
Sbjct: 513 LMQGRCREGKVEEARMLLDEMKRRGIKPDHISYNTLISGYGRRGDIKDAFRVRDEMLSIG 572
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKM 113
+P T++ LIK CK + LA + +M KG P++ SLI +G +
Sbjct: 573 FNPTLLTYNALIKCLCKNQEGDLAEELLKEMVNKGISPDDSTYLSLIEGMGNV 625
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/101 (26%), Positives = 54/101 (53%), Gaps = 7/101 (6%)
Query: 29 DVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYMLAYRTM 88
DV++ N+M+ +C G++E +++++D ++ PD TF+ L++ C+E A +
Sbjct: 471 DVIMFNAMVDGHCANGNVERAFMLLKEMDRKSVPPDEVTFNTLMQGRCREGKVEEARMLL 530
Query: 89 VDMHRKGHQPEEELCSSLIFHLGK-------MRAHSEALSV 122
+M R+G +P+ ++LI G+ R E LS+
Sbjct: 531 DEMKRRGIKPDHISYNTLISGYGRRGDIKDAFRVRDEMLSI 571
Score = 42.7 bits (99), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 21/78 (26%), Positives = 38/78 (48%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
M++ C+ G ++ ++ G E K +VV N+++ Y G++E ++ +
Sbjct: 233 MVNVLCKEGKLKKAREFIGFMEGLGFKPNVVSYNTIIHGYSSRGNIEGARRILDAMRVKG 292
Query: 61 ISPDYNTFHILIKYFCKE 78
I PD T+ LI CKE
Sbjct: 293 IEPDSYTYGSLISGMCKE 310
Score = 41.6 bits (96), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 23/98 (23%), Positives = 43/98 (43%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
M+ C +G E L + + K D V N+++ CR G +E ++ ++
Sbjct: 478 MVDGHCANGNVERAFMLLKEMDRKSVPPDEVTFNTLMQGRCREGKVEEARMLLDEMKRRG 537
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQP 98
I PD+ +++ LI + + A+R +M G P
Sbjct: 538 IKPDHISYNTLISGYGRRGDIKDAFRVRDEMLSIGFNP 575
Score = 38.1 bits (87), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 26/106 (24%), Positives = 46/106 (43%), Gaps = 14/106 (13%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKY-------DVVLLNSMLCAYCRTGDMESVMHVM 53
+IS C+ G EE L +DK + V N+++ YC GD+E
Sbjct: 303 LISGMCKEGRLEEASGL-------FDKMVEIGLVPNAVTYNTLIDGYCNKGDLERAFSYR 355
Query: 54 RKLDELAISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPE 99
++ + I P +T+++L+ E A + +M +KG P+
Sbjct: 356 DEMVKKGIMPSVSTYNLLVHALFMEGRMGEADDMIKEMRKKGIIPD 401
Score = 37.0 bits (84), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 21/98 (21%), Positives = 43/98 (43%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I + G E +++ K + D S++ C+ G +E + K+ E+
Sbjct: 268 IIHGYSSRGNIEGARRILDAMRVKGIEPDSYTYGSLISGMCKEGRLEEASGLFDKMVEIG 327
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQP 98
+ P+ T++ LI +C + A+ +M +KG P
Sbjct: 328 LVPNAVTYNTLIDGYCNKGDLERAFSYRDEMVKKGIMP 365
>gi|15242446|ref|NP_198787.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75170916|sp|Q9FIX3.1|PP407_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g39710; AltName: Full=Protein EMBRYO DEFECTIVE 2745
gi|10177971|dbj|BAB11377.1| unnamed protein product [Arabidopsis thaliana]
gi|332007083|gb|AED94466.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 747
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 57/107 (53%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ C +G E+ + D + K DVV +++L +CR+ D++ + V R++ E
Sbjct: 421 LINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKG 480
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLI 107
I PD T+ LI+ FC+++ A +M R G P+E ++LI
Sbjct: 481 IKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALI 527
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 35/128 (27%), Positives = 59/128 (46%), Gaps = 1/128 (0%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ F + G E ++ + VV N+++ +C TG ME + V+ + E
Sbjct: 386 LVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKG 445
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+SPD ++ ++ FC+ A R +M KG +P+ SSLI + R EA
Sbjct: 446 LSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEAC 505
Query: 121 SVY-NMLR 127
+Y MLR
Sbjct: 506 DLYEEMLR 513
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 36/148 (24%), Positives = 68/148 (45%), Gaps = 4/148 (2%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I +C+ ++ +L K + +++ N ++ CR G M+ V V+ +++
Sbjct: 246 LIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRG 305
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
S D T++ LIK +CKE + A +M R G P +SLI + K + A+
Sbjct: 306 YSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAM 365
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISG 148
+ +R R +C +E+ L+ G
Sbjct: 366 EFLDQMRV--RGLCP--NERTYTTLVDG 389
Score = 42.7 bits (99), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 34/149 (22%), Positives = 69/149 (46%), Gaps = 14/149 (9%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I FC +G + L E K +VV N+++ YC+ ++ ++R +
Sbjct: 211 LIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALKG 270
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLI--------FHLGK 112
+ P+ +++++I C+E + +M+R+G+ +E ++LI FH
Sbjct: 271 LEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQA- 329
Query: 113 MRAHSEALS---VYNMLRYSK--RSMCKA 136
+ H+E L +++ Y+ SMCKA
Sbjct: 330 LVMHAEMLRHGLTPSVITYTSLIHSMCKA 358
Score = 41.2 bits (95), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 22/107 (20%), Positives = 48/107 (44%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I +C+ G F + + + V+ S++ + C+ G+M M + ++
Sbjct: 316 LIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRG 375
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLI 107
+ P+ T+ L+ F ++ AYR + +M+ G P ++LI
Sbjct: 376 LCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALI 422
Score = 39.7 bits (91), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 30/119 (25%), Positives = 52/119 (43%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++S FCRS +E ++ + K K D + +S++ +C + + ++ +
Sbjct: 456 VLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVG 515
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEA 119
+ PD T+ LI +C E A + +M KG P+ S LI L K EA
Sbjct: 516 LPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREA 574
>gi|449532274|ref|XP_004173107.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g53330-like [Cucumis sativus]
Length = 394
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/125 (30%), Positives = 61/125 (48%), Gaps = 2/125 (1%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+ISA + G EE + + K D V N+++ +C+ D+ES VM ++ E
Sbjct: 199 LISALFKHGRKEEVSDILREMGENGCKPDTVTYNAIINGHCKENDLESAHRVMDEMVEKG 258
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFH-LGKMRAHSEA 119
PD +F+ +I + CKE A + DM R+G P + L +IF L +M EA
Sbjct: 259 CKPDVFSFNTIIGWLCKEGKLDKAMDLLEDMPRRGCPP-DVLSYRIIFDGLCEMMQLKEA 317
Query: 120 LSVYN 124
S+ +
Sbjct: 318 TSILD 322
Score = 42.0 bits (97), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 46/99 (46%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I FC G +L + K + ++++ A + G E V ++R++ E
Sbjct: 164 LIKGFCGVGELNFAFKLKEEMVTSNVKLVSAVYSTLISALFKHGRKEEVSDILREMGENG 223
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPE 99
PD T++ +I CKE A+R M +M KG +P+
Sbjct: 224 CKPDTVTYNAIINGHCKENDLESAHRVMDEMVEKGCKPD 262
Score = 39.3 bits (90), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 23/110 (20%), Positives = 47/110 (42%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ C+ E ++ + K K DV N+++ C+ G ++ M ++ +
Sbjct: 234 IINGHCKENDLESAHRVMDEMVEKGCKPDVFSFNTIIGWLCKEGKLDKAMDLLEDMPRRG 293
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHL 110
PD ++ I+ C+ A + +M KG+ P E + L+ L
Sbjct: 294 CPPDVLSYRIIFDGLCEMMQLKEATSILDEMIFKGYVPRNESINKLVDRL 343
>gi|449522636|ref|XP_004168332.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g09680-like [Cucumis sativus]
Length = 590
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/165 (23%), Positives = 74/165 (44%), Gaps = 18/165 (10%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+++ C+ G + ++L + + K D + +++ YC+ GD+ES M + + ++E
Sbjct: 369 LLNGLCKVGDVNKARKLVDEMKMVGMKPDKITYTTLIDGYCKEGDLESAMEIRKGMNEEG 428
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLI------------F 108
+ D F LI FC++ A RT+ +M G +P++ + +I F
Sbjct: 429 VVLDNVAFTALISGFCRDGRVRDAERTLREMVEAGMKPDDATYTMVIDGYCKKGNVKMGF 488
Query: 109 HLGK---MRAHSEALSVYNMLRYSKRSMCKALHEKILHILISGKL 150
L K + H + YN+L +CK K ++L+ L
Sbjct: 489 KLLKEMQINGHKPGVITYNVLM---NGLCKQGQMKNANMLLEAML 530
Score = 52.0 bits (123), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 27/126 (21%), Positives = 62/126 (49%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ FC+ G + K + + + + V N+++ C++ +++ + + ++E
Sbjct: 229 LINKFCKEGSIRDAKLIFNEIRKRGLRPTTVSFNTLINGLCKSRNLDEGFRLKKTMEENR 288
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
I PD T+ +LI CKE +A + +M ++G +P ++LI + R A+
Sbjct: 289 IYPDVFTYSVLIHGLCKEGRLDVAEQLFDEMQQRGLRPNGITFTALIDGQYRSRRMDSAM 348
Query: 121 SVYNML 126
+ Y+ +
Sbjct: 349 NTYHQM 354
Score = 38.9 bits (89), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 18/78 (23%), Positives = 40/78 (51%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I +C+ G + +L + + K V+ N ++ C+ G M++ ++ + L
Sbjct: 474 VIDGYCKKGNVKMGFKLLKEMQINGHKPGVITYNVLMNGLCKQGQMKNANMLLEAMLNLG 533
Query: 61 ISPDYNTFHILIKYFCKE 78
++PD T++IL++ CK
Sbjct: 534 VTPDDITYNILLEGHCKN 551
Score = 38.5 bits (88), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 16/52 (30%), Positives = 30/52 (57%)
Query: 27 KYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKE 78
K D+V+ N++L C+ GD+ ++ ++ + + PD T+ LI +CKE
Sbjct: 360 KPDLVMYNTLLNGLCKVGDVNKARKLVDEMKMVGMKPDKITYTTLIDGYCKE 411
Score = 35.8 bits (81), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 20/107 (18%), Positives = 51/107 (47%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C+ G + +QL + + + + + + +++ R+ M+S M+ ++ +
Sbjct: 299 LIHGLCKEGRLDVAEQLFDEMQQRGLRPNGITFTALIDGQYRSRRMDSAMNTYHQMLTMG 358
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLI 107
+ PD ++ L+ CK A + + +M G +P++ ++LI
Sbjct: 359 VKPDLVMYNTLLNGLCKVGDVNKARKLVDEMKMVGMKPDKITYTTLI 405
>gi|225428276|ref|XP_002279589.1| PREDICTED: pentatricopeptide repeat-containing protein At2g17140
[Vitis vinifera]
gi|297744485|emb|CBI37747.3| unnamed protein product [Vitis vinifera]
Length = 878
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/118 (33%), Positives = 59/118 (50%), Gaps = 6/118 (5%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKL---D 57
+IS+FCR G EE ++L DVV NS + A C G + + R + +
Sbjct: 227 LISSFCREGRNEEAERLVERMREDGLFPDVVTFNSRISALCSAGKILEASRIFRDMQIDE 286
Query: 58 ELAIS-PDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMR 114
EL + P+ TF+++++ FCKE M A + M R G+ E E S I+ LG +R
Sbjct: 287 ELGLPRPNITTFNLMLEGFCKEGMLEEAKTLVESMKRNGNLMELE--SYNIWLLGLVR 342
Score = 42.4 bits (98), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 28/105 (26%), Positives = 49/105 (46%), Gaps = 11/105 (10%)
Query: 1 MISAFCRSGCFEETKQL---AGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLD 57
++ +CR+G +L G F + +K V+ N+++ ++CR G E ++ ++
Sbjct: 192 LVRGYCRAGLSMRALELLDGMGSFGVQPNK---VIYNTLISSFCREGRNEEAERLVERMR 248
Query: 58 ELAISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEEL 102
E + PD TF+ I C + A R DM Q +EEL
Sbjct: 249 EDGLFPDVVTFNSRISALCSAGKILEASRIFRDM-----QIDEEL 288
Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 22/99 (22%), Positives = 43/99 (43%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ C SG FE+ +++ K + + ++ YCR G + ++ +
Sbjct: 157 LIAGLCDSGRFEDAREVFDKMGVKGCRPNEFSFGILVRGYCRAGLSMRALELLDGMGSFG 216
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPE 99
+ P+ ++ LI FC+E A R + M G P+
Sbjct: 217 VQPNKVIYNTLISSFCREGRNEEAERLVERMREDGLFPD 255
Score = 39.7 bits (91), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 23/95 (24%), Positives = 43/95 (45%)
Query: 33 LNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYMLAYRTMVDMH 92
LN ++ C +G E V K+ P+ +F IL++ +C+ + M A + M
Sbjct: 154 LNLLIAGLCDSGRFEDAREVFDKMGVKGCRPNEFSFGILVRGYCRAGLSMRALELLDGMG 213
Query: 93 RKGHQPEEELCSSLIFHLGKMRAHSEALSVYNMLR 127
G QP + + ++LI + + EA + +R
Sbjct: 214 SFGVQPNKVIYNTLISSFCREGRNEEAERLVERMR 248
Score = 38.5 bits (88), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 24/107 (22%), Positives = 45/107 (42%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
M+ FC+ G EE K L + + ++ N L R G + ++++ +
Sbjct: 301 MLEGFCKEGMLEEAKTLVESMKRNGNLMELESYNIWLLGLVRNGKLLEAQLALKEMVDKG 360
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLI 107
I P+ +F+ ++ CK + A M M G P+ S+L+
Sbjct: 361 IEPNIYSFNTVMDGLCKNGLISDARMIMGLMISSGIGPDTVTYSTLL 407
Score = 37.4 bits (85), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 19/99 (19%), Positives = 46/99 (46%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ C++G +E ++ + K D ++ ++ + ++C+ G + S V++ +++
Sbjct: 534 IINGLCKAGRLDEARKKFIEMVGKSLHPDSIIYDTFIHSFCKHGKISSAFRVLKDMEKRG 593
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPE 99
+ T++ LI + Y + DM KG P
Sbjct: 594 CNKSLQTYNSLILGLGSKNQIFEIYGLLDDMKEKGITPN 632
Score = 37.0 bits (84), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 28/131 (21%), Positives = 58/131 (44%), Gaps = 10/131 (7%)
Query: 29 DVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYMLAYRTM 88
D++ + ++ C+ G ++ ++ ++ PD + I FCK A+R +
Sbjct: 527 DLITYSIIINGLCKAGRLDEARKKFIEMVGKSLHPDSIIYDTFIHSFCKHGKISSAFRVL 586
Query: 89 VDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVYNMLRYSKR-----SMCKALHEKILH 143
DM ++G + +SLI LG + ++ +Y +L K ++C + ++
Sbjct: 587 KDMEKRGCNKSLQTYNSLILGLG---SKNQIFEIYGLLDDMKEKGITPNICT--YNNMIS 641
Query: 144 ILISGKLLKDA 154
L G +KDA
Sbjct: 642 CLCEGGRIKDA 652
Score = 37.0 bits (84), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 18/65 (27%), Positives = 34/65 (52%)
Query: 13 ETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILI 72
E L D + K ++ N+M+ C G ++ ++ ++ + ISP+ ++F +LI
Sbjct: 616 EIYGLLDDMKEKGITPNICTYNNMISCLCEGGRIKDATSLLDEMLQKGISPNISSFRLLI 675
Query: 73 KYFCK 77
K FCK
Sbjct: 676 KAFCK 680
>gi|224092332|ref|XP_002309562.1| predicted protein [Populus trichocarpa]
gi|222855538|gb|EEE93085.1| predicted protein [Populus trichocarpa]
Length = 590
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/124 (26%), Positives = 58/124 (46%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ C+ G F + + DFEA + V +++ C+ G+ + + +K++E
Sbjct: 171 LINGLCKVGKFAQAVEFFDDFEASGCQPTVYTYTTIINGLCKIGETTAAAGLFKKMEEAG 230
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
P+ T++ILI CK+K+ A M K P+ +SLI L R EA
Sbjct: 231 CQPNVVTYNILIDSLCKDKLVNEALDIFSYMKAKRISPDIFTYNSLIQGLCNFRRWKEAS 290
Query: 121 SVYN 124
++ N
Sbjct: 291 ALLN 294
Score = 42.4 bits (98), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 22/100 (22%), Positives = 46/100 (46%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ FC+ G + +L ++ Y K D+ + N ++ A C+ G+++ + +L
Sbjct: 451 LLDGFCKEGYLGKAFRLFRVMQSTYLKPDIAMYNILIDAMCKFGNLKDARKLFSELFVQG 510
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEE 100
+ P+ + +I CKE + A +M G P+E
Sbjct: 511 LLPNVQIYTTIINNLCKEGLLDEALEAFRNMEGDGCPPDE 550
Score = 40.4 bits (93), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 26/123 (21%), Positives = 54/123 (43%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C+ G E + L + + + D+ + +L +C+ G + + R +
Sbjct: 416 LIHGLCQLGRLREAQDLFKNMHSNGNLPDLFTYSMLLDGFCKEGYLGKAFRLFRVMQSTY 475
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ PD ++ILI CK A + ++ +G P ++ +++I +L K EAL
Sbjct: 476 LKPDIAMYNILIDAMCKFGNLKDARKLFSELFVQGLLPNVQIYTTIINNLCKEGLLDEAL 535
Query: 121 SVY 123
+
Sbjct: 536 EAF 538
Score = 39.3 bits (90), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 25/108 (23%), Positives = 46/108 (42%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I + C+ E + +AK D+ NS++ C + ++ ++ L
Sbjct: 241 LIDSLCKDKLVNEALDIFSYMKAKRISPDIFTYNSLIQGLCNFRRWKEASALLNEMTSLN 300
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIF 108
I P+ TF++L+ CKE A M G +P+ SSL++
Sbjct: 301 IMPNIFTFNVLVDAICKEGKVSEAQGVFKTMTEMGVEPDVVTYSSLMY 348
Score = 38.9 bits (89), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 33/154 (21%), Positives = 66/154 (42%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I +C++ +E KQL + + D V N+++ C+ G + + + +
Sbjct: 381 LIKGYCKAKRIDEAKQLFNEMIHQGLTPDNVNYNTLIHGLCQLGRLREAQDLFKNMHSNG 440
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
PD T+ +L+ FCKE A+R M +P+ + + LI + K +A
Sbjct: 441 NLPDLFTYSMLLDGFCKEGYLGKAFRLFRVMQSTYLKPDIAMYNILIDAMCKFGNLKDAR 500
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLKDA 154
+++ L ++ I++ L LL +A
Sbjct: 501 KLFSELFVQGLLPNVQIYTTIINNLCKEGLLDEA 534
Score = 35.0 bits (79), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 33/160 (20%), Positives = 69/160 (43%), Gaps = 2/160 (1%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C ++E L + + ++ N ++ A C+ G + V + + E+
Sbjct: 276 LIQGLCNFRRWKEASALLNEMTSLNIMPNIFTFNVLVDAICKEGKVSEAQGVFKTMTEMG 335
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVD-MHRKGHQPEEELCSSLIFHLGKMRAHSEA 119
+ PD T+ L+ Y +M ++ R + D M KG +P+ + LI K + EA
Sbjct: 336 VEPDVVTYSSLM-YGYSLRMEIVEARKLFDAMITKGCKPDAFSYNILIKGYCKAKRIDEA 394
Query: 120 LSVYNMLRYSKRSMCKALHEKILHILISGKLLKDAYIVVK 159
++N + + + + ++H L L++A + K
Sbjct: 395 KQLFNEMIHQGLTPDNVNYNTLIHGLCQLGRLREAQDLFK 434
>gi|255557937|ref|XP_002519997.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223540761|gb|EEF42321.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 1429
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/122 (29%), Positives = 61/122 (50%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
MIS + R G + +QL + E+K D V NS+L A+ R G+++ V + ++ ++
Sbjct: 323 MISVYGRCGFSGKAEQLFKELESKGYFPDAVTYNSLLYAFAREGNVDKVKEICNEMVQMG 382
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
D T++ +I + K+ + LA + DM G P+ + LI LGK EA
Sbjct: 383 FIRDEMTYNTIIHMYGKQGQHGLALQLYRDMKLSGRTPDAITYTVLIDSLGKANKMVEAA 442
Query: 121 SV 122
+V
Sbjct: 443 NV 444
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/126 (23%), Positives = 58/126 (46%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
MI C+ + + + + E + D+ + NSML Y D + + +++ E
Sbjct: 881 MIGLLCKGKRVRDVEAMVTEMEEAGFRPDLSIWNSMLRLYTGIDDFRKTVQIYQRIKEDG 940
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ PD +T++ LI +C++ M +M R G +P+ + SLI GK + +A
Sbjct: 941 LQPDEDTYNTLIVMYCRDHRPEEGCSLMHEMRRIGLEPKLDTYKSLIAAFGKQQLVVDAE 1000
Query: 121 SVYNML 126
++ L
Sbjct: 1001 ELFEEL 1006
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/132 (26%), Positives = 60/132 (45%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+ISA R EE ++ D EA Y + D+ N+M+ Y R G + ++L+
Sbjct: 288 LISACSRESNLEEAVKVFDDMEAHYCQPDLWTYNAMISVYGRCGFSGKAEQLFKELESKG 347
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
PD T++ L+ F +E +M + G +E +++I GK H AL
Sbjct: 348 YFPDAVTYNSLLYAFAREGNVDKVKEICNEMVQMGFIRDEMTYNTIIHMYGKQGQHGLAL 407
Query: 121 SVYNMLRYSKRS 132
+Y ++ S R+
Sbjct: 408 QLYRDMKLSGRT 419
Score = 36.2 bits (82), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 29/127 (22%), Positives = 58/127 (45%), Gaps = 16/127 (12%)
Query: 34 NSMLCAYCRTG---DMESVMHVMRKLDELAISPDYNTFHILIKYFCK---EKMYMLAYRT 87
++++C Y R G + E MR+ I PD + +++ F + M+ YR
Sbjct: 461 SALICGYARAGQRLEAEETFDCMRR---SGIRPDQLAYSVMLDVFLRFDEATKAMMLYRE 517
Query: 88 MVDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVYNMLRYSKRSMCKALHEKILHILIS 147
MV R G P+ + +++ +LG+ ++ + ++R +C + I IL+
Sbjct: 518 MV---RDGITPDPTVYGAMLRNLGR---ENKVEDIQRIIR-DMEEVCGMNPQAIASILVK 570
Query: 148 GKLLKDA 154
G+ +DA
Sbjct: 571 GECYEDA 577
>gi|115466932|ref|NP_001057065.1| Os06g0199100 [Oryza sativa Japonica Group]
gi|51091829|dbj|BAD36643.1| putative PPR protein [Oryza sativa Japonica Group]
gi|113595105|dbj|BAF18979.1| Os06g0199100 [Oryza sativa Japonica Group]
Length = 1283
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/148 (24%), Positives = 73/148 (49%), Gaps = 8/148 (5%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
MIS C + F + + + + E K D+V+LN++L Y TG+ + + V + E
Sbjct: 733 MISLLCHNKRFRDVELMVAEMEGAGFKPDLVVLNTLLLMYTGTGNFDRTIEVYHSILEAG 792
Query: 61 ISPDYNTFHILI----KYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAH 116
+ PD +T++ LI + F E+ + L Y +M ++G P+ E L+ GK +
Sbjct: 793 LEPDEDTYNTLIVMYSRNFRPEEGFTLLY----EMGKRGLTPKLESYKILLAASGKAKLW 848
Query: 117 SEALSVYNMLRYSKRSMCKALHEKILHI 144
+A ++ +R + ++++ ++ I
Sbjct: 849 EQADLLFEEMRTKGYRLNRSIYHMMMKI 876
Score = 44.3 bits (103), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 36/122 (29%), Positives = 56/122 (45%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
M+S R G +E + + + K + D V NS+L A+ + GD+E V V +L +
Sbjct: 174 MVSVHGRCGKAQEAELMFKELVEKGFQPDAVTYNSLLYAFAKEGDVERVERVCEELVKAG 233
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
D T++ +I + K LA +M G P+ + L+ LGKM SEA
Sbjct: 234 FRKDGITYNTMIHMYGKMGRLDLALGLYDEMRAIGCTPDAVTYTVLVDSLGKMDRISEAG 293
Query: 121 SV 122
V
Sbjct: 294 KV 295
Score = 43.1 bits (100), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 22/95 (23%), Positives = 47/95 (49%), Gaps = 6/95 (6%)
Query: 27 KYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKE---KMYML 83
K +V ++++CAY ++G + ++ E + PD + +++ F + + M+
Sbjct: 305 KPTLVTFSALICAYAKSGRQDDAERTFDRMVESGVKPDRLAYLVMLDVFARSDETRKLMV 364
Query: 84 AYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSE 118
YR M+ + G++P++ L L+ L K H E
Sbjct: 365 LYRAMI---KDGYKPDDGLYQVLLAALAKGNEHDE 396
>gi|225430658|ref|XP_002268375.1| PREDICTED: pentatricopeptide repeat-containing protein At5g18390,
mitochondrial [Vitis vinifera]
gi|296085168|emb|CBI28663.3| unnamed protein product [Vitis vinifera]
Length = 454
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/141 (26%), Positives = 59/141 (41%), Gaps = 15/141 (10%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ +G E K++ + DV LNSML A C+ G+ E + + + L
Sbjct: 253 LVDGLLNAGYLEAAKEMVRKMTKEGCAPDVETLNSMLEAICKAGEAEFCIDIYNDVCRLG 312
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLI------------- 107
+SP+ T+ I+I CKE A+R + GH+P L + +I
Sbjct: 313 VSPNVGTYKIMIPAACKEGRIDEAFRILHRSIEDGHRPFPSLYAPIIKALCRNGQFDDAF 372
Query: 108 --FHLGKMRAHSEALSVYNML 126
F K++ H VY ML
Sbjct: 373 CFFSDMKVKGHPPNRPVYTML 393
>gi|449451896|ref|XP_004143696.1| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
mitochondrial-like [Cucumis sativus]
Length = 1032
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/123 (25%), Positives = 60/123 (48%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+IS FC+ G E+ QL + ++V+ N+++ C+ G++ + +++E
Sbjct: 667 LISGFCKEGDIEKASQLYDEMLHNGINPNIVVYNTLINGLCKLGEVTKARELFDEIEEKD 726
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ PD T+ +I +CK A++ +M KG P+ + LI GK +AL
Sbjct: 727 LVPDVVTYSTIIDGYCKSGNLTEAFKLFDEMISKGISPDGYIYCILIDGCGKEGNLEKAL 786
Query: 121 SVY 123
S++
Sbjct: 787 SLF 789
Score = 44.3 bits (103), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 32/122 (26%), Positives = 56/122 (45%), Gaps = 1/122 (0%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I A C+ G + K + + E K K ++ N+ + C+TG ++ + V + + E
Sbjct: 248 VIKAHCKVGDVIKGKMVLSEME-KECKPNLFTYNAFIGGLCQTGAVDEALEVKKLMMEKG 306
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ PD +T+ +L+ FCK+K A M G P ++LI K EAL
Sbjct: 307 LGPDGHTYTLLVDGFCKQKRSKEAKLIFESMPSSGLNPNRFTYTALIDGFIKEGNIEEAL 366
Query: 121 SV 122
+
Sbjct: 367 RI 368
Score = 43.5 bits (101), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 28/122 (22%), Positives = 62/122 (50%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I A+ ++ EE +QL D E + + + S+L +Y + G+ ++ + + ++
Sbjct: 841 LIDAYGKAEMMEEAEQLFLDMETRNIIPNTLTYTSLLLSYNQIGNRFKMISLFKDMEARG 900
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
I+ D + ++ +CKE + A + + +G + E+++ +LIFHL K + S L
Sbjct: 901 IACDAIAYGVMASAYCKEGKSLEALKLLNKSLVEGIKLEDDVFDALIFHLCKEKQISTVL 960
Query: 121 SV 122
+
Sbjct: 961 EL 962
Score = 41.2 bits (95), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 38/148 (25%), Positives = 64/148 (43%), Gaps = 4/148 (2%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I CR+ EE K L D K K + + + Y ++G+++ + +
Sbjct: 527 LIIGLCRAKKVEEAKMLLVDMGEKGIKPNAHTYGAFINLYSKSGEIQVAERYFKDMLSSG 586
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
I P+ + ILIK C + A T M KG P+ S++I L K EA+
Sbjct: 587 IVPNNVIYTILIKGHCDVGNTVEALSTFKCMLEKGLIPDIRAYSAIIHSLSKNGKTKEAM 646
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISG 148
V+ L++ K + + + + LISG
Sbjct: 647 GVF--LKFLKTGVVPDVF--LYNSLISG 670
Score = 40.0 bits (92), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 26/110 (23%), Positives = 48/110 (43%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I F + G EE ++ + + K +VV N+M+ + G+M M + ++
Sbjct: 352 LIDGFIKEGNIEEALRIKDEMITRGLKLNVVTYNAMIGGIAKAGEMAKAMSLFNEMLMAG 411
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHL 110
+ PD T+++LI + K A + +M + P S LI L
Sbjct: 412 LEPDTWTYNLLIDGYLKSHDMAKACELLAEMKARKLTPSPFTYSVLISGL 461
Score = 37.7 bits (86), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 23/96 (23%), Positives = 44/96 (45%)
Query: 29 DVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYMLAYRTM 88
DV L NS++ +C+ GD+E + ++ I+P+ ++ LI CK A
Sbjct: 660 DVFLYNSLISGFCKEGDIEKASQLYDEMLHNGINPNIVVYNTLINGLCKLGEVTKARELF 719
Query: 89 VDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVYN 124
++ K P+ S++I K +EA +++
Sbjct: 720 DEIEEKDLVPDVVTYSTIIDGYCKSGNLTEAFKLFD 755
Score = 35.4 bits (80), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 25/108 (23%), Positives = 45/108 (41%)
Query: 20 DFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEK 79
D EA+ D + M AYC+ G + ++ K I + + F LI + CKEK
Sbjct: 895 DMEARGIACDAIAYGVMASAYCKEGKSLEALKLLNKSLVEGIKLEDDVFDALIFHLCKEK 954
Query: 80 MYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVYNMLR 127
+ +M ++ + C++L+ K EA V +++
Sbjct: 955 QISTVLELLSEMGKEELSLSSKTCNTLLLGFYKSGNEDEASKVLGVMQ 1002
>gi|222635128|gb|EEE65260.1| hypothetical protein OsJ_20463 [Oryza sativa Japonica Group]
Length = 1443
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/148 (24%), Positives = 73/148 (49%), Gaps = 8/148 (5%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
MIS C + F + + + + E K D+V+LN++L Y TG+ + + V + E
Sbjct: 893 MISLLCHNKRFRDVELMVAEMEGAGFKPDLVVLNTLLLMYTGTGNFDRTIEVYHSILEAG 952
Query: 61 ISPDYNTFHILI----KYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAH 116
+ PD +T++ LI + F E+ + L Y +M ++G P+ E L+ GK +
Sbjct: 953 LEPDEDTYNTLIVMYSRNFRPEEGFTLLY----EMGKRGLTPKLESYKILLAASGKAKLW 1008
Query: 117 SEALSVYNMLRYSKRSMCKALHEKILHI 144
+A ++ +R + ++++ ++ I
Sbjct: 1009 EQADLLFEEMRTKGYRLNRSIYHMMMKI 1036
Score = 43.9 bits (102), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 36/122 (29%), Positives = 56/122 (45%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
M+S R G +E + + + K + D V NS+L A+ + GD+E V V +L +
Sbjct: 334 MVSVHGRCGKAQEAELMFKELVEKGFQPDAVTYNSLLYAFAKEGDVERVERVCEELVKAG 393
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
D T++ +I + K LA +M G P+ + L+ LGKM SEA
Sbjct: 394 FRKDGITYNTMIHMYGKMGRLDLALGLYDEMRAIGCTPDAVTYTVLVDSLGKMDRISEAG 453
Query: 121 SV 122
V
Sbjct: 454 KV 455
Score = 43.5 bits (101), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 22/95 (23%), Positives = 47/95 (49%), Gaps = 6/95 (6%)
Query: 27 KYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKE---KMYML 83
K +V ++++CAY ++G + ++ E + PD + +++ F + + M+
Sbjct: 465 KPTLVTFSALICAYAKSGRQDDAERTFDRMVESGVKPDRLAYLVMLDVFARSDETRKLMV 524
Query: 84 AYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSE 118
YR M+ + G++P++ L L+ L K H E
Sbjct: 525 LYRAMI---KDGYKPDDGLYQVLLAALAKGNEHDE 556
>gi|449439615|ref|XP_004137581.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g74580-like [Cucumis sativus]
Length = 857
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/122 (26%), Positives = 57/122 (46%)
Query: 2 ISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAI 61
I CR G +E +L ++ DV+ N+++C +C+ + + K+ +
Sbjct: 258 IQGLCRKGAIDEAARLLESIVSEGLTPDVISYNTLICGFCKHSKLVEAECYLHKMVNSGV 317
Query: 62 SPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEALS 121
P+ T++ +I FCK M A + + D KG P+E SSLI L + A++
Sbjct: 318 EPNEFTYNTIINGFCKAGMMQNADKILRDAMFKGFIPDEFTYSSLINGLCNDGDMNRAMA 377
Query: 122 VY 123
V+
Sbjct: 378 VF 379
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 30/127 (23%), Positives = 58/127 (45%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+++ C+ GC + + D AK D+ N+++ YC+ +M+ + ++ +
Sbjct: 432 VVNGLCKMGCLSDANGILNDAIAKGCIPDIFTFNTLIDGYCKQRNMDKAIEILDTMLSHG 491
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
I+PD T++ L+ CK + T M KG P + LI K R SEA+
Sbjct: 492 ITPDVITYNTLLNGLCKARKLDNVVDTFKAMLEKGCTPNIITYNILIESFCKDRKVSEAM 551
Query: 121 SVYNMLR 127
++ ++
Sbjct: 552 ELFKEMK 558
Score = 43.9 bits (102), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 29/127 (22%), Positives = 57/127 (44%), Gaps = 1/127 (0%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYD-KYDVVLLNSMLCAYCRTGDMESVMHVMRKLDEL 59
+I C +G ++ +L E +Y Y + N M+ A+C ++ + K+
Sbjct: 572 LICGLCSNGELDKAYELFVTIEKEYKFSYSTAIFNIMINAFCEKLNVSMAEKLFHKMGGS 631
Query: 60 AISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEA 119
+PD T+ ++I +CK LA+ +++ KG P C ++ L SEA
Sbjct: 632 DCAPDNYTYRVMIDSYCKTGNIDLAHTFLLENISKGLVPSFTTCGKVLNCLCVTHRLSEA 691
Query: 120 LSVYNML 126
+ + N++
Sbjct: 692 VVIINLM 698
Score = 43.1 bits (100), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 21/99 (21%), Positives = 49/99 (49%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I +C+ ++ ++ + DV+ N++L C+ +++V+ + + E
Sbjct: 467 LIDGYCKQRNMDKAIEILDTMLSHGITPDVITYNTLLNGLCKARKLDNVVDTFKAMLEKG 526
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPE 99
+P+ T++ILI+ FCK++ A +M +G P+
Sbjct: 527 CTPNIITYNILIESFCKDRKVSEAMELFKEMKTRGLTPD 565
Score = 42.0 bits (97), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 30/124 (24%), Positives = 54/124 (43%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ FC++G + ++ D K D +S++ C GDM M V + E
Sbjct: 327 IINGFCKAGMMQNADKILRDAMFKGFIPDEFTYSSLINGLCNDGDMNRAMAVFYEAMEKG 386
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
++ L+K K+ + + A + M DM G P+ + ++ L KM S+A
Sbjct: 387 FKHSIILYNTLVKGLSKQGLVLQALQLMKDMMEHGCSPDIWTYNLVVNGLCKMGCLSDAN 446
Query: 121 SVYN 124
+ N
Sbjct: 447 GILN 450
Score = 37.7 bits (86), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 29/128 (22%), Positives = 61/128 (47%), Gaps = 4/128 (3%)
Query: 1 MISAFCRSGCFEETKQLAGDFEA--KYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDE 58
+I+ C G + + +A +EA K K+ ++L N+++ + G + + +M+ + E
Sbjct: 362 LINGLCNDG--DMNRAMAVFYEAMEKGFKHSIILYNTLVKGLSKQGLVLQALQLMKDMME 419
Query: 59 LAISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSE 118
SPD T+++++ CK A + D KG P+ ++LI K R +
Sbjct: 420 HGCSPDIWTYNLVVNGLCKMGCLSDANGILNDAIAKGCIPDIFTFNTLIDGYCKQRNMDK 479
Query: 119 ALSVYNML 126
A+ + + +
Sbjct: 480 AIEILDTM 487
Score = 36.2 bits (82), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 22/107 (20%), Positives = 48/107 (44%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C+ G +E+++L + ++ N + CR G ++ ++ +
Sbjct: 222 LIHVLCKKGNVQESEKLFSKVMKRGVCPNLFTFNIFIQGLCRKGAIDEAARLLESIVSEG 281
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLI 107
++PD +++ LI FCK + A + M G +P E +++I
Sbjct: 282 LTPDVISYNTLICGFCKHSKLVEAECYLHKMVNSGVEPNEFTYNTII 328
Score = 35.8 bits (81), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 21/99 (21%), Positives = 46/99 (46%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+IS F + C E L + + D++ N ++ C+ G+++ + K+ +
Sbjct: 187 VISGFYKENCQIEAYHLFDEMLKQGICPDILTFNKLIHVLCKKGNVQESEKLFSKVMKRG 246
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPE 99
+ P+ TF+I I+ C++ A R + + +G P+
Sbjct: 247 VCPNLFTFNIFIQGLCRKGAIDEAARLLESIVSEGLTPD 285
>gi|357113916|ref|XP_003558747.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g01110-like [Brachypodium distachyon]
Length = 651
Score = 54.7 bits (130), Expect = 1e-05, Method: Composition-based stats.
Identities = 32/127 (25%), Positives = 62/127 (48%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I FCR+G EE + + + DVV + ++ + R G+M+ +R++ E
Sbjct: 270 LIGGFCRAGELEEALRFYKEMRGRRVTPDVVSFSCLIGLFTRRGEMDHAAEYLREMREFG 329
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ PD + ++I FC+ + + A R +M G P+ ++L+ L K R S+A
Sbjct: 330 LMPDGVIYTMVIGGFCRAGLMLEALRVRDEMVAFGCLPDVVTYNTLLNGLCKERRLSDAE 389
Query: 121 SVYNMLR 127
+ N ++
Sbjct: 390 ELLNEMK 396
Score = 45.4 bits (106), Expect = 0.008, Method: Composition-based stats.
Identities = 36/156 (23%), Positives = 69/156 (44%), Gaps = 10/156 (6%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I +CR G E+ Q + + D+V N+++ CR GD+ + +
Sbjct: 410 LIHGYCRDGNIEKALQFFDTISDQRLRPDIVTYNTLIDGMCRQGDLGKANELWDDMHSRE 469
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
I P++ T+ ILI C++ A+ + +M KG P +S+I G R+ +
Sbjct: 470 IFPNHVTYSILIDSHCEKGQVDNAFAFLDEMVNKGIVPNIMTYNSII--KGYCRSGN--- 524
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLKDAYI 156
+ ++ + K H+K++ LI+ L Y+
Sbjct: 525 -----VSKGQQFLPKMRHDKVMPDLITYNTLIHGYV 555
Score = 43.9 bits (102), Expect = 0.024, Method: Composition-based stats.
Identities = 31/107 (28%), Positives = 47/107 (43%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
M+ A R+G E L +K K +V NS+L R G + V R +D
Sbjct: 200 MVDARFRAGDVEAAMALIDSMVSKGIKPGLVTYNSVLKGLLRNGRWDKAREVFRAMDACG 259
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLI 107
++PD +F++LI FC+ A R +M + P+ S LI
Sbjct: 260 VAPDVRSFNMLIGGFCRAGELEEALRFYKEMRGRRVTPDVVSFSCLI 306
Score = 41.2 bits (95), Expect = 0.15, Method: Composition-based stats.
Identities = 21/78 (26%), Positives = 38/78 (48%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I FCR+G E ++ + A DVV N++L C+ + ++ ++ E
Sbjct: 340 VIGGFCRAGLMLEALRVRDEMVAFGCLPDVVTYNTLLNGLCKERRLSDAEELLNEMKERG 399
Query: 61 ISPDYNTFHILIKYFCKE 78
+ PD TF LI +C++
Sbjct: 400 VPPDLCTFTTLIHGYCRD 417
Score = 40.8 bits (94), Expect = 0.17, Method: Composition-based stats.
Identities = 31/127 (24%), Positives = 55/127 (43%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
M+ ++C++ F E + + E + DVV N M+ A R GD+E+ M ++ +
Sbjct: 165 MVHSYCKTLQFGEVDTVISEMEKRCVFPDVVTHNVMVDARFRAGDVEAAMALIDSMVSKG 224
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
I P T++ ++K + + A M G P+ + LI + EAL
Sbjct: 225 IKPGLVTYNSVLKGLLRNGRWDKAREVFRAMDACGVAPDVRSFNMLIGGFCRAGELEEAL 284
Query: 121 SVYNMLR 127
Y +R
Sbjct: 285 RFYKEMR 291
Score = 40.8 bits (94), Expect = 0.18, Method: Composition-based stats.
Identities = 22/107 (20%), Positives = 47/107 (43%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+++ C+ + ++L + + + D+ +++ YCR G++E + + +
Sbjct: 375 LLNGLCKERRLSDAEELLNEMKERGVPPDLCTFTTLIHGYCRDGNIEKALQFFDTISDQR 434
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLI 107
+ PD T++ LI C++ A DMH + P S LI
Sbjct: 435 LRPDIVTYNTLIDGMCRQGDLGKANELWDDMHSREIFPNHVTYSILI 481
Score = 38.1 bits (87), Expect = 1.1, Method: Composition-based stats.
Identities = 22/99 (22%), Positives = 44/99 (44%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I + C G + + K +++ NS++ YCR+G++ + K+
Sbjct: 480 LIDSHCEKGQVDNAFAFLDEMVNKGIVPNIMTYNSIIKGYCRSGNVSKGQQFLPKMRHDK 539
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPE 99
+ PD T++ LI + KE A+ + M + QP+
Sbjct: 540 VMPDLITYNTLIHGYVKEGKMHEAFNLLKIMENENVQPD 578
Score = 37.0 bits (84), Expect = 2.5, Method: Composition-based stats.
Identities = 25/122 (20%), Positives = 55/122 (45%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ R+G +++ +++ +A DV N ++ +CR G++E + +++
Sbjct: 235 VLKGLLRNGRWDKAREVFRAMDACGVAPDVRSFNMLIGGFCRAGELEEALRFYKEMRGRR 294
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
++PD +F LI F + A + +M G P+ + + +I + EAL
Sbjct: 295 VTPDVVSFSCLIGLFTRRGEMDHAAEYLREMREFGLMPDGVIYTMVIGGFCRAGLMLEAL 354
Query: 121 SV 122
V
Sbjct: 355 RV 356
>gi|449456681|ref|XP_004146077.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g53330-like [Cucumis sativus]
Length = 527
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 49/99 (49%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+ISA + G EE + + K D V N+++ +C+ D+ES VM ++ E
Sbjct: 332 LISALFKHGRKEEVSDILREMGENGCKPDTVTYNAIINGHCKENDLESAHRVMDEMVEKG 391
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPE 99
PD +F+ +I + CKE A + DM R+G P+
Sbjct: 392 CKPDVFSFNTIIGWLCKEGKLDKAMDLLEDMPRRGCPPD 430
Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 46/99 (46%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I FC G +L + K + ++++ A + G E V ++R++ E
Sbjct: 297 LIKGFCGVGELNFAFKLKEEMVTSNVKLVSAVYSTLISALFKHGRKEEVSDILREMGENG 356
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPE 99
PD T++ +I CKE A+R M +M KG +P+
Sbjct: 357 CKPDTVTYNAIINGHCKENDLESAHRVMDEMVEKGCKPD 395
Score = 38.9 bits (89), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 23/110 (20%), Positives = 47/110 (42%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ C+ E ++ + K K DV N+++ C+ G ++ M ++ +
Sbjct: 367 IINGHCKENDLESAHRVMDEMVEKGCKPDVFSFNTIIGWLCKEGKLDKAMDLLEDMPRRG 426
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHL 110
PD ++ I+ C+ A + +M KG+ P E + L+ L
Sbjct: 427 CPPDVLSYRIIFDGLCEMMQLKEATSILDEMIFKGYVPRNESINKLVDRL 476
>gi|449520325|ref|XP_004167184.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
mitochondrial-like [Cucumis sativus]
Length = 605
Score = 54.3 bits (129), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/151 (27%), Positives = 70/151 (46%), Gaps = 1/151 (0%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I FC +G +EE+K+L + + + D+V N ++ C+ G + ++ + E
Sbjct: 256 LIHGFCCAGKWEESKRLLDEMLDQGLQPDMVTFNVLIDTLCKEGKVIEAKKLLGVMIESG 315
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
I PD T++ LI+ FC A V M KG +P+ + LI K EA+
Sbjct: 316 IVPDLVTYNSLIEGFCMVGDLNSARELFVSMPSKGCEPDVISYNVLINGYSKTLKVEEAM 375
Query: 121 SVYN-MLRYSKRSMCKALHEKILHILISGKL 150
+YN ML KR + I ++GK+
Sbjct: 376 KLYNEMLLVGKRPNVITYDSLLKGIFLAGKV 406
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/107 (25%), Positives = 52/107 (48%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ C+ G +E KQL + + + ++ NS++ +C G E ++ ++ +
Sbjct: 221 IVDGLCKVGREDEAKQLFEEMKTQGMIPSIISYNSLIHGFCCAGKWEESKRLLDEMLDQG 280
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLI 107
+ PD TF++LI CKE + A + + M G P+ +SLI
Sbjct: 281 LQPDMVTFNVLIDTLCKEGKVIEAKKLLGVMIESGIVPDLVTYNSLI 327
Score = 44.7 bits (104), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 23/98 (23%), Positives = 44/98 (44%)
Query: 2 ISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAI 61
+ C++ C E +L + ++ K ++ LN ++ C+ G +E+ + KL
Sbjct: 432 LDGLCKNDCLFEAMKLFTELKSSNFKLEIENLNCLIDGLCKAGKLETAWELFEKLSNEGH 491
Query: 62 SPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPE 99
P+ T+ I+I FC+E A + M G P+
Sbjct: 492 EPNVVTYTIMIHGFCREGQVDKANVLIQKMEANGCTPD 529
Score = 42.4 bits (98), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 26/120 (21%), Positives = 55/120 (45%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C++G E +L + + +VV M+ +CR G ++ +++K++
Sbjct: 466 LIDGLCKAGKLETAWELFEKLSNEGHEPNVVTYTIMIHGFCREGQVDKANVLIQKMEANG 525
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+PD T++ L++ F + + + M +K P+ CS ++ L K + E L
Sbjct: 526 CTPDIITYNTLMRGFYESNKLEEVVQLLHRMAQKDVSPDAITCSIVVDMLSKDEKYQECL 585
>gi|449446121|ref|XP_004140820.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g09680-like [Cucumis sativus]
Length = 590
Score = 54.3 bits (129), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/165 (23%), Positives = 73/165 (44%), Gaps = 18/165 (10%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+++ C+ G + ++L + K D + +++ YC+ GD+ES M + + ++E
Sbjct: 369 LLNGLCKVGDVNKARKLVDEMRMVGMKPDKITYTTLIDGYCKEGDLESAMEIRKGMNEEG 428
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLI------------F 108
+ D F LI FC++ A RT+ +M G +P++ + +I F
Sbjct: 429 VVLDNVAFTALISGFCRDGRVRDAERTLREMVEAGMKPDDATYTMVIDGYCKKGNVKMGF 488
Query: 109 HLGK---MRAHSEALSVYNMLRYSKRSMCKALHEKILHILISGKL 150
L K + H + YN+L +CK K ++L+ L
Sbjct: 489 KLLKEMQINGHKPGVITYNVLM---NGLCKQGQMKNANMLLEAML 530
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/126 (21%), Positives = 62/126 (49%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ FC+ G + K + + + + V N+++ C++ +++ + + ++E
Sbjct: 229 LINKFCKEGSIRDAKLIFNEIRKRGLRPTTVSFNTLINGLCKSRNLDEGFRLKKTMEENR 288
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
I PD T+ +LI CKE +A + +M ++G +P ++LI + R A+
Sbjct: 289 IYPDVFTYSVLIHGLCKEGRLDVAEQLFDEMQQRGLRPNGITFTALIDGQCRSRRIDSAM 348
Query: 121 SVYNML 126
+ Y+ +
Sbjct: 349 NTYHQM 354
Score = 39.3 bits (90), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 20/107 (18%), Positives = 52/107 (48%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C+ G + +QL + + + + + + +++ CR+ ++S M+ ++ +
Sbjct: 299 LIHGLCKEGRLDVAEQLFDEMQQRGLRPNGITFTALIDGQCRSRRIDSAMNTYHQMLTMG 358
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLI 107
+ PD ++ L+ CK A + + +M G +P++ ++LI
Sbjct: 359 VKPDLVMYNTLLNGLCKVGDVNKARKLVDEMRMVGMKPDKITYTTLI 405
Score = 38.9 bits (89), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 18/78 (23%), Positives = 40/78 (51%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I +C+ G + +L + + K V+ N ++ C+ G M++ ++ + L
Sbjct: 474 VIDGYCKKGNVKMGFKLLKEMQINGHKPGVITYNVLMNGLCKQGQMKNANMLLEAMLNLG 533
Query: 61 ISPDYNTFHILIKYFCKE 78
++PD T++IL++ CK
Sbjct: 534 VTPDDITYNILLEGHCKN 551
>gi|302820627|ref|XP_002991980.1| hypothetical protein SELMODRAFT_162081 [Selaginella moellendorffii]
gi|300140222|gb|EFJ06948.1| hypothetical protein SELMODRAFT_162081 [Selaginella moellendorffii]
Length = 509
Score = 54.3 bits (129), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/161 (24%), Positives = 71/161 (44%), Gaps = 5/161 (3%)
Query: 1 MISAFCRSGCFEETKQLAGDFE-AKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDEL 59
+I C+ +E ++L FE A D DV++ S + C+ G ++ V K+ E
Sbjct: 233 LIDGLCKHDRHDEAREL---FEMAAGDVQDVIVYTSFISGLCKAGKLDEAKAVHVKMIEA 289
Query: 60 AISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEA 119
+PD +++++I CK+ A M + P +C+ L+ L K R EA
Sbjct: 290 GCAPDPVSYNVIIYSLCKDNRVSEAKELMDQAMERKCMPGVPVCTVLVDGLCKSRRVEEA 349
Query: 120 LSVYN-MLRYSKRSMCKALHEKILHILISGKLLKDAYIVVK 159
+ ML R+ + ++ L L DAY+V++
Sbjct: 350 CVILERMLETGDRAPSVVTYSAVIDGLCKADRLDDAYVVLQ 390
Score = 41.2 bits (95), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 19/78 (24%), Positives = 38/78 (48%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I AFC+ G +E ++L + DVV N ++ YCR ++ + ++ ++
Sbjct: 407 IIDAFCKVGRLDEARELFQRMHERGCALDVVAYNILIRGYCRAAKVDEAIAMIEEMAGRG 466
Query: 61 ISPDYNTFHILIKYFCKE 78
I P+ + ++ CKE
Sbjct: 467 IQPNVVSLSTIVDGLCKE 484
Score = 38.1 bits (87), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 22/91 (24%), Positives = 45/91 (49%)
Query: 29 DVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYMLAYRTM 88
DVV +++ A+C+ G ++ + +++ E + D ++ILI+ +C+ A +
Sbjct: 400 DVVTYTAIIDAFCKVGRLDEARELFQRMHERGCALDVVAYNILIRGYCRAAKVDEAIAMI 459
Query: 89 VDMHRKGHQPEEELCSSLIFHLGKMRAHSEA 119
+M +G QP S+++ L K EA
Sbjct: 460 EEMAGRGIQPNVVSLSTIVDGLCKESRVEEA 490
Score = 35.8 bits (81), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 33/180 (18%), Positives = 70/180 (38%), Gaps = 35/180 (19%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I FC++ + L G+ +A +V S++ C + + + ++ ++
Sbjct: 58 LIRGFCKAEQIPQAVNLLGEMKAAGITPTIVTFGSLIRKLCELNFTDKALQIFHQMIDMK 117
Query: 61 ISPDYNTFHILIKYFCK-----------EKMYM-------LAYRTMV------------- 89
+ PD + ++I + CK E+M + Y +V
Sbjct: 118 VKPDAFLYTVVIGHLCKINKLDLAASYFERMVQSGCLPDKVTYTVLVHSLFKACKWEQGH 177
Query: 90 ----DMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVYNMLRYSKRSMCKALHEKILHIL 145
+M KGH PE ++++ K +ALS+ L+ + RS +L+ ++ L
Sbjct: 178 QIFEEMLSKGHSPELVTYATVVNGYCKAGRIDQALSLMRRLKGTGRSPSGSLYSTLIDGL 237
>gi|449524916|ref|XP_004169467.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At1g74580-like [Cucumis
sativus]
Length = 877
Score = 54.3 bits (129), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/122 (26%), Positives = 57/122 (46%)
Query: 2 ISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAI 61
I CR G +E +L ++ DV+ N+++C +C+ + + K+ +
Sbjct: 258 IQGLCRKGAIDEAARLLESIVSEGLTPDVISYNTLICGFCKHSKLVEAECYLHKMVNSGV 317
Query: 62 SPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEALS 121
P+ T++ +I FCK M A + + D KG P+E SSLI L + A++
Sbjct: 318 EPNEFTYNTIINGFCKAGMMQNADKILRDAMFKGFIPDEFTYSSLINGLCNDGDMNRAMA 377
Query: 122 VY 123
V+
Sbjct: 378 VF 379
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 30/127 (23%), Positives = 58/127 (45%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+++ C+ GC + + D AK D+ N+++ YC+ +M+ + ++ +
Sbjct: 432 VVNGLCKMGCLSDANGILNDAIAKGCIPDIFTFNTLIDGYCKQRNMDKAIEILDTMLSHG 491
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
I+PD T++ L+ CK + T M KG P + LI K R SEA+
Sbjct: 492 ITPDVITYNTLLNGLCKARKLDNVVDTFKAMLEKGCTPNIITYNILIESFCKDRKVSEAM 551
Query: 121 SVYNMLR 127
++ ++
Sbjct: 552 ELFKEMK 558
Score = 43.5 bits (101), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 29/127 (22%), Positives = 57/127 (44%), Gaps = 1/127 (0%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYD-KYDVVLLNSMLCAYCRTGDMESVMHVMRKLDEL 59
+I C +G ++ +L E +Y Y + N M+ A+C ++ + K+
Sbjct: 572 LICGLCSNGELDKAYELFVTIEKEYKFSYSTAIFNIMINAFCXKLNVSMAEKLFHKMGGS 631
Query: 60 AISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEA 119
+PD T+ ++I +CK LA+ +++ KG P C ++ L SEA
Sbjct: 632 DCAPDNYTYRVMIDSYCKTGNIDLAHTFLLENISKGLVPSFTTCGKVLNCLCVTHRLSEA 691
Query: 120 LSVYNML 126
+ + N++
Sbjct: 692 VVIINLM 698
Score = 43.1 bits (100), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 19/71 (26%), Positives = 39/71 (54%)
Query: 29 DVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYMLAYRTM 88
DV+ N++L C+ +++V+ + + E +P+ T++ILI+ FCK++ A
Sbjct: 495 DVITYNTLLNGLCKARKLDNVVDTFKAMLEKGCTPNIITYNILIESFCKDRKVSEAMELF 554
Query: 89 VDMHRKGHQPE 99
+M +G P+
Sbjct: 555 KEMKTRGLTPD 565
Score = 42.0 bits (97), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 30/124 (24%), Positives = 54/124 (43%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ FC++G + ++ D K D +S++ C GDM M V + E
Sbjct: 327 IINGFCKAGMMQNADKILRDAMFKGFIPDEFTYSSLINGLCNDGDMNRAMAVFYEAMEKG 386
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
++ L+K K+ + + A + M DM G P+ + ++ L KM S+A
Sbjct: 387 FKHSIILYNTLVKGLSKQGLVLQALQLMKDMMEHGCSPDIWTYNLVVNGLCKMGCLSDAN 446
Query: 121 SVYN 124
+ N
Sbjct: 447 GILN 450
Score = 37.7 bits (86), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 29/128 (22%), Positives = 61/128 (47%), Gaps = 4/128 (3%)
Query: 1 MISAFCRSGCFEETKQLAGDFEA--KYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDE 58
+I+ C G + + +A +EA K K+ ++L N+++ + G + + +M+ + E
Sbjct: 362 LINGLCNDG--DMNRAMAVFYEAMEKGFKHSIILYNTLVKGLSKQGLVLQALQLMKDMME 419
Query: 59 LAISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSE 118
SPD T+++++ CK A + D KG P+ ++LI K R +
Sbjct: 420 HGCSPDIWTYNLVVNGLCKMGCLSDANGILNDAIAKGCIPDIFTFNTLIDGYCKQRNMDK 479
Query: 119 ALSVYNML 126
A+ + + +
Sbjct: 480 AIEILDTM 487
Score = 35.8 bits (81), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 21/99 (21%), Positives = 46/99 (46%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+IS F + C E L + + D++ N ++ C+ G+++ + K+ +
Sbjct: 187 VISGFYKENCQIEAYHLFDEMLKQGICPDILTFNKLIHVLCKKGNVQESEKLFSKVMKRG 246
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPE 99
+ P+ TF+I I+ C++ A R + + +G P+
Sbjct: 247 VCPNLFTFNIFIQGLCRKGAIDEAARLLESIVSEGLTPD 285
Score = 35.8 bits (81), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 22/107 (20%), Positives = 48/107 (44%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C+ G +E+++L + ++ N + CR G ++ ++ +
Sbjct: 222 LIHVLCKKGNVQESEKLFSKVMKRGVCPNLFTFNIFIQGLCRKGAIDEAARLLESIVSEG 281
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLI 107
++PD +++ LI FCK + A + M G +P E +++I
Sbjct: 282 LTPDVISYNTLICGFCKHSKLVEAECYLHKMVNSGVEPNEFTYNTII 328
>gi|115450929|ref|NP_001049065.1| Os03g0165100 [Oryza sativa Japonica Group]
gi|113547536|dbj|BAF10979.1| Os03g0165100 [Oryza sativa Japonica Group]
Length = 695
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 49/99 (49%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
M+ A R+G E L +K K +V NS+L CR+G + V +++D+
Sbjct: 136 MVDARFRAGDAEAAMALVDSMVSKGLKPGIVTYNSVLKGLCRSGMWDKAWEVFKEMDDFG 195
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPE 99
++PD +F ILI FC+ A + +M +G +P+
Sbjct: 196 VAPDVRSFTILIGGFCRVGEIEEALKIYKEMRHRGIKPD 234
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 31/128 (24%), Positives = 61/128 (47%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
M+ +C++ F++ + + E + DVV N M+ A R GD E+ M ++ +
Sbjct: 101 MVHNYCKALEFDKVDAVISEMEKRCVFPDVVTHNVMVDARFRAGDAEAAMALVDSMVSKG 160
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ P T++ ++K C+ M+ A+ +M G P+ + LI ++ EAL
Sbjct: 161 LKPGIVTYNSVLKGLCRSGMWDKAWEVFKEMDDFGVAPDVRSFTILIGGFCRVGEIEEAL 220
Query: 121 SVYNMLRY 128
+Y +R+
Sbjct: 221 KIYKEMRH 228
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 32/127 (25%), Positives = 60/127 (47%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I FCR G EE ++ + + K D+V + ++ + R G M+ M +R++
Sbjct: 206 LIGGFCRVGEIEEALKIYKEMRHRGIKPDLVSFSCLIGLFARRGKMDHAMAYLREMRCFG 265
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ PD + ++I FC+ + A R +M G P+ ++L+ L K R +A
Sbjct: 266 LVPDGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCKERRLLDAE 325
Query: 121 SVYNMLR 127
+ N +R
Sbjct: 326 GLLNEMR 332
Score = 42.0 bits (97), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 26/107 (24%), Positives = 50/107 (46%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I +C G ++ QL + + D+V N+++ CR GD++ + +
Sbjct: 346 LIHGYCIEGKLDKALQLFDTMLNQRLRPDIVTYNTLIDGMCRQGDLDKANDLWDDMHSRE 405
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLI 107
I P++ T+ ILI C++ A+ + +M KG P +S+I
Sbjct: 406 IFPNHVTYSILIDSHCEKGQVEDAFGFLDEMINKGILPNIMTYNSII 452
Score = 40.8 bits (94), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 24/99 (24%), Positives = 49/99 (49%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I + C G E+ + K +++ NS++ YCR+G++ ++K+
Sbjct: 416 LIDSHCEKGQVEDAFGFLDEMINKGILPNIMTYNSIIKGYCRSGNVSKGQKFLQKMMVNK 475
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPE 99
+SPD T++ LI + KE A++ + M ++ QP+
Sbjct: 476 VSPDLITYNTLIHGYIKEDKMHDAFKLLNMMEKEKVQPD 514
Score = 40.0 bits (92), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 26/122 (21%), Positives = 55/122 (45%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ CRSG +++ ++ + + DV ++ +CR G++E + + +++
Sbjct: 171 VLKGLCRSGMWDKAWEVFKEMDDFGVAPDVRSFTILIGGFCRVGEIEEALKIYKEMRHRG 230
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
I PD +F LI F + A + +M G P+ + + +I + S+AL
Sbjct: 231 IKPDLVSFSCLIGLFARRGKMDHAMAYLREMRCFGLVPDGVIYTMVIGGFCRAGLMSDAL 290
Query: 121 SV 122
V
Sbjct: 291 RV 292
Score = 37.7 bits (86), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 20/76 (26%), Positives = 37/76 (48%), Gaps = 2/76 (2%)
Query: 29 DVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYMLAYRTM 88
D V+ ++ +CR G M + V ++ PD T++ L+ CKE+ + A +
Sbjct: 269 DGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCKERRLLDAEGLL 328
Query: 89 VDMHRKGHQPEEELCS 104
+M +G P +LC+
Sbjct: 329 NEMRERGVPP--DLCT 342
Score = 37.7 bits (86), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 38/81 (46%), Gaps = 6/81 (7%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYC---RTGDMESVMHVMRKLD 57
+I FCR+G + ++ + DVV N++L C R D E +++ MR
Sbjct: 276 VIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCKERRLLDAEGLLNEMR--- 332
Query: 58 ELAISPDYNTFHILIKYFCKE 78
E + PD TF LI +C E
Sbjct: 333 ERGVPPDLCTFTTLIHGYCIE 353
>gi|326489757|dbj|BAK01859.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 746
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/127 (29%), Positives = 64/127 (50%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+++ FC SG E K+L K + +VV NS++ YC +M+S + + +
Sbjct: 573 LMNGFCMSGRVEGGKKLLEWMLEKNVRPNVVTYNSLMKQYCIDKNMKSTTEIYKGMHSQE 632
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
++P+ NT++ILIK CK + A +M KG + S+LI L K + SEA
Sbjct: 633 VAPNENTYNILIKGHCKARNMKEALYFHQEMIEKGLRLTASSYSALIRLLNKKKKFSEAR 692
Query: 121 SVYNMLR 127
++ +R
Sbjct: 693 VFFDKMR 699
Score = 42.4 bits (98), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 29/120 (24%), Positives = 52/120 (43%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C+SG F+ + + K K + N ++ +C +G +E ++ + E
Sbjct: 538 LIDTLCKSGEFDRAHNMLQEMLDKGIKPSIATYNVLMNGFCMSGRVEGGKKLLEWMLEKN 597
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ P+ T++ L+K +C +K MH + P E + LI K R EAL
Sbjct: 598 VRPNVVTYNSLMKQYCIDKNMKSTTEIYKGMHSQEVAPNENTYNILIKGHCKARNMKEAL 657
Score = 42.0 bits (97), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 16/76 (21%), Positives = 42/76 (55%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ C+ G E+ ++ + EA + DV +++ C++G+ + ++++++ +
Sbjct: 503 LINGLCKFGNLEQAMRIMTEMEAAGHRTDVYTYTTLIDTLCKSGEFDRAHNMLQEMLDKG 562
Query: 61 ISPDYNTFHILIKYFC 76
I P T+++L+ FC
Sbjct: 563 IKPSIATYNVLMNGFC 578
Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 29/123 (23%), Positives = 58/123 (47%), Gaps = 3/123 (2%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+IS FC G ++L + + + D V +++ CR G+++ V++++ +
Sbjct: 363 VISGFCSKGDLAAARRLFEEMQKRGLAADRVTHTALINGLCRAGELKEADRVLQEMVDKG 422
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHL---GKMRAHS 117
+ D T+ +LI +CK + A+R +M + P ++L L G +RA +
Sbjct: 423 LDVDVVTYTVLIDGYCKRGNMVEAFRVHNEMVGRRVAPNVVTYTALSDGLCKQGDVRAAN 482
Query: 118 EAL 120
E L
Sbjct: 483 ELL 485
Score = 40.8 bits (94), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 23/95 (24%), Positives = 43/95 (45%)
Query: 4 AFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISP 63
C+ G +L + K + +V NS++ C+ G++E M +M +++
Sbjct: 471 GLCKQGDVRAANELLHEMCNKGLELNVYTYNSLINGLCKFGNLEQAMRIMTEMEAAGHRT 530
Query: 64 DYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQP 98
D T+ LI CK + A+ + +M KG +P
Sbjct: 531 DVYTYTTLIDTLCKSGEFDRAHNMLQEMLDKGIKP 565
Score = 39.3 bits (90), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 29/122 (23%), Positives = 54/122 (44%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ CR+G +E ++ + K DVV ++ YC+ G+M V ++
Sbjct: 398 LINGLCRAGELKEADRVLQEMVDKGLDVDVVTYTVLIDGYCKRGNMVEAFRVHNEMVGRR 457
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
++P+ T+ L CK+ A + +M KG + +SLI L K +A+
Sbjct: 458 VAPNVVTYTALSDGLCKQGDVRAANELLHEMCNKGLELNVYTYNSLINGLCKFGNLEQAM 517
Query: 121 SV 122
+
Sbjct: 518 RI 519
Score = 36.6 bits (83), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 30/141 (21%), Positives = 61/141 (43%), Gaps = 15/141 (10%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I +C+ G E ++ + + +VV ++ C+ GD+ + ++ ++
Sbjct: 433 LIDGYCKRGNMVEAFRVHNEMVGRRVAPNVVTYTALSDGLCKQGDVRAANELLHEMCNKG 492
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKM----RAH 116
+ + T++ LI CK A R M +M GH+ + ++LI L K RAH
Sbjct: 493 LELNVYTYNSLINGLCKFGNLEQAMRIMTEMEAAGHRTDVYTYTTLIDTLCKSGEFDRAH 552
Query: 117 S-----------EALSVYNML 126
+ +++ YN+L
Sbjct: 553 NMLQEMLDKGIKPSIATYNVL 573
>gi|15240891|ref|NP_195731.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75174092|sp|Q9LFC5.1|PP360_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g01110
gi|6759434|emb|CAB69839.1| putative protein [Arabidopsis thaliana]
gi|28973740|gb|AAO64186.1| unknown protein [Arabidopsis thaliana]
gi|110736884|dbj|BAF00399.1| hypothetical protein [Arabidopsis thaliana]
gi|332002917|gb|AED90300.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 729
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 53/127 (41%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
M++A C+ G E+ + K D+V N+++ AY G ME +M +
Sbjct: 241 MVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKGLMEEAFELMNAMPGKG 300
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
SP T++ +I CK Y A +M R G P+ SL+ K E
Sbjct: 301 FSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDVVETE 360
Query: 121 SVYNMLR 127
V++ +R
Sbjct: 361 KVFSDMR 367
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 40/74 (54%)
Query: 29 DVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYMLAYRTM 88
DV NS+L +CR M+ V+RK+ E ++PD +T+ +I F + A+R
Sbjct: 656 DVFTYNSILHGFCRQNQMKEAEVVLRKMIERGVNPDRSTYTCMINGFVSQDNLTEAFRIH 715
Query: 89 VDMHRKGHQPEEEL 102
+M ++G P+++
Sbjct: 716 DEMLQRGFSPDDKF 729
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 33/143 (23%), Positives = 73/143 (51%), Gaps = 4/143 (2%)
Query: 6 CRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDY 65
C+ G ET+++ D ++ D+V +SM+ + R+G+++ + + E + PD
Sbjct: 351 CKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDN 410
Query: 66 NTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVYNM 125
+ ILI+ +C++ M +A +M ++G + ++++ L K + EA ++N
Sbjct: 411 VIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNE 470
Query: 126 LRYSKRSMCKALHEKILHILISG 148
+ ++R++ + L ILI G
Sbjct: 471 M--TERALFPDSY--TLTILIDG 489
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/107 (23%), Positives = 50/107 (46%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C+ G + +L + K + DVV N++L + + GD+++ + +
Sbjct: 486 LIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKE 545
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLI 107
I P ++ IL+ C + A+R +M K +P +C+S+I
Sbjct: 546 ILPTPISYSILVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMI 592
Score = 45.1 bits (105), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 34/128 (26%), Positives = 56/128 (43%), Gaps = 1/128 (0%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I + R G E + + +V LN M+ A C+ G ME V + ++ E
Sbjct: 206 LIGSLVRIGWVELAWGVYQEISRSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKG 265
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ PD T++ LI + + + A+ M M KG P +++I L K + A
Sbjct: 266 VYPDIVTYNTLISAYSSKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAK 325
Query: 121 SVY-NMLR 127
V+ MLR
Sbjct: 326 EVFAEMLR 333
Score = 40.0 bits (92), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 21/79 (26%), Positives = 40/79 (50%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+++A C G E ++ + +K K V++ NSM+ YCR+G+ + K+
Sbjct: 556 LVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDGESFLEKMISEG 615
Query: 61 ISPDYNTFHILIKYFCKEK 79
PD +++ LI F +E+
Sbjct: 616 FVPDCISYNTLIYGFVREE 634
Score = 39.3 bits (90), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 29/127 (22%), Positives = 53/127 (41%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+ISA+ G EE +L K V N+++ C+ G E V ++
Sbjct: 276 LISAYSSKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSG 335
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+SPD T+ L+ CK+ + + DM + P+ SS++ + +AL
Sbjct: 336 LSPDSTTYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKAL 395
Query: 121 SVYNMLR 127
+N ++
Sbjct: 396 MYFNSVK 402
Score = 38.1 bits (87), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 24/126 (19%), Positives = 56/126 (44%), Gaps = 2/126 (1%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDE-- 58
MI +CRSG + + ++ D + N+++ + R +M +++K++E
Sbjct: 591 MIKGYCRSGNASDGESFLEKMISEGFVPDCISYNTLIYGFVREENMSKAFGLVKKMEEEQ 650
Query: 59 LAISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSE 118
+ PD T++ ++ FC++ A + M +G P+ + +I +E
Sbjct: 651 GGLVPDVFTYNSILHGFCRQNQMKEAEVVLRKMIERGVNPDRSTYTCMINGFVSQDNLTE 710
Query: 119 ALSVYN 124
A +++
Sbjct: 711 AFRIHD 716
>gi|242091782|ref|XP_002436381.1| hypothetical protein SORBIDRAFT_10g001520 [Sorghum bicolor]
gi|241914604|gb|EER87748.1| hypothetical protein SORBIDRAFT_10g001520 [Sorghum bicolor]
Length = 546
Score = 54.3 bits (129), Expect = 2e-05, Method: Composition-based stats.
Identities = 25/107 (23%), Positives = 53/107 (49%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+++A+C G E +QL D A + D + ++ YC G ++ +M +++
Sbjct: 245 VLTAYCAKGDLEGAQQLFDDIVASGRRPDATMYTVLVDGYCHRGKLQDAARIMDEMEAAG 304
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLI 107
+ P+ T+ ++I+ CKE + A +M G+ P+ LC+ ++
Sbjct: 305 VKPNEVTYSVVIEACCKEGKSIEACDLTREMLGAGYVPDTPLCAKVV 351
Score = 43.1 bits (100), Expect = 0.040, Method: Composition-based stats.
Identities = 27/107 (25%), Positives = 48/107 (44%), Gaps = 1/107 (0%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C++G +E + L + E + ++ NS++ C G+++ V + E
Sbjct: 385 LIYWLCKNGMVQEARGLFDELERGFVP-SLLTYNSLIIGLCENGELQEAGRVWDDMVERR 443
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLI 107
P+ T+ LIK FCK Y +M KG P + L +L+
Sbjct: 444 YEPNAMTYEALIKGFCKIGKSNEGYALFKEMVAKGCTPSKFLYQALV 490
Score = 43.1 bits (100), Expect = 0.043, Method: Composition-based stats.
Identities = 23/79 (29%), Positives = 35/79 (44%)
Query: 29 DVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYMLAYRTM 88
DVV ++L AYC GD+E + + PD + +L+ +C A R M
Sbjct: 238 DVVTYTTVLTAYCAKGDLEGAQQLFDDIVASGRRPDATMYTVLVDGYCHRGKLQDAARIM 297
Query: 89 VDMHRKGHQPEEELCSSLI 107
+M G +P E S +I
Sbjct: 298 DEMEAAGVKPNEVTYSVVI 316
>gi|357145546|ref|XP_003573680.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Brachypodium distachyon]
Length = 739
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 51/206 (24%), Positives = 81/206 (39%), Gaps = 51/206 (24%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
M+ C +G E + L D A+ + +VV+ N+++ YC GD+E + V ++D
Sbjct: 183 MVHGLCGAGRTREAETLLSDAMAEGFEPNVVVYNALIDGYCNVGDLELAVDVFERMDVNG 242
Query: 61 ISPDYNTFHILIKYFCK----EKMYML-------------------------------AY 85
SP+ T+ LI FCK ++ ML AY
Sbjct: 243 CSPNVRTYTELISGFCKSRKLDRAMMLFSRMVDAGLVPNVVTYTALIQGQCSDGQLDCAY 302
Query: 86 RTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSV----------YNMLRYSK--RSM 133
R + M G P E CS LI L K EA + N + Y+ +
Sbjct: 303 RLLQSMENSGLVPNEWTCSVLIDALCKHERVGEAQLLLGSLIQKGIKVNEIVYTSLIDGL 362
Query: 134 CK----ALHEKILHILISGKLLKDAY 155
CK A ++++ L+S + DA+
Sbjct: 363 CKAGRFAAADRLMQTLVSQGFVPDAH 388
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 27/98 (27%), Positives = 44/98 (44%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I A C+ E + L G K K + ++ S++ C+ G + +M+ L
Sbjct: 323 LIDALCKHERVGEAQLLLGSLIQKGIKVNEIVYTSLIDGLCKAGRFAAADRLMQTLVSQG 382
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQP 98
PD +T+ LI C++K A + DM KG QP
Sbjct: 383 FVPDAHTYSSLIDGLCRQKELSEAMLVLDDMMEKGVQP 420
>gi|297834130|ref|XP_002884947.1| hypothetical protein ARALYDRAFT_897532 [Arabidopsis lyrata subsp.
lyrata]
gi|297330787|gb|EFH61206.1| hypothetical protein ARALYDRAFT_897532 [Arabidopsis lyrata subsp.
lyrata]
Length = 528
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/128 (23%), Positives = 66/128 (51%), Gaps = 1/128 (0%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYD-KYDVVLLNSMLCAYCRTGDMESVMHVMRKLDEL 59
++SA+ S +E K+ + K D+V N+M+ A CRTG M+ ++ + +L++
Sbjct: 166 LLSAYVNSRKLDEAKKAFKELPEKLGITPDLVTYNTMIKALCRTGSMDDILSIFEELEKN 225
Query: 60 AISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEA 119
PD +F+ L++ F + ++++ R M K P +S + L + + ++A
Sbjct: 226 GFEPDLISFNTLLEEFYRRELFVEGDRIWDLMKSKNLAPNIRSYNSRVRGLTRNKKFTDA 285
Query: 120 LSVYNMLR 127
+ + N+++
Sbjct: 286 IDLINVMK 293
>gi|108711657|gb|ABF99452.1| Calreticulin family protein, expressed [Oryza sativa Japonica
Group]
Length = 1111
Score = 54.3 bits (129), Expect = 2e-05, Method: Composition-based stats.
Identities = 34/129 (26%), Positives = 58/129 (44%), Gaps = 7/129 (5%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
MI +CRS +EE + L + + VV N+++ +Y R GD++ M ++ +++E
Sbjct: 223 MIFGYCRSAEWEEARHLLDSMRQEGTQPGVVTWNTLISSYARFGDLDVAMELLGQMEESG 282
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEE-------ELCSSLIFHLGKM 113
++PD T+ L+ F A R + M G +P C+SL
Sbjct: 283 VAPDVVTWTSLVSGFVHMDRSDEALRCFIRMRLAGVEPNGMSIACAISACASLKLLNQAK 342
Query: 114 RAHSEALSV 122
HS A+ V
Sbjct: 343 ELHSHAIKV 351
Score = 39.7 bits (91), Expect = 0.43, Method: Composition-based stats.
Identities = 24/101 (23%), Positives = 44/101 (43%)
Query: 29 DVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYMLAYRTM 88
D+ NSM+ YCR+ + E H++ + + P T++ LI + + +A +
Sbjct: 216 DLGTWNSMIFGYCRSAEWEEARHLLDSMRQEGTQPGVVTWNTLISSYARFGDLDVAMELL 275
Query: 89 VDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVYNMLRYS 129
M G P+ +SL+ M EAL + +R +
Sbjct: 276 GQMEESGVAPDVVTWTSLVSGFVHMDRSDEALRCFIRMRLA 316
Score = 37.4 bits (85), Expect = 2.1, Method: Composition-based stats.
Identities = 24/99 (24%), Positives = 43/99 (43%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
MIS + ++G + +L E + +V+ N+M+ Y R GD E + + ++
Sbjct: 394 MISGYAQAGYCGKAYELFCKMENYGVRRNVITWNTMISGYIRNGDDERAFELFQMMESHG 453
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPE 99
+ D T++ILI Y A R M +P+
Sbjct: 454 VKRDTATWNILIAGSVHNGYYDRAIRIFRQMQALLRRPD 492
>gi|20219038|gb|AAM15782.1|AC104428_3 Putative indole-3-acetate beta-glucosyltransferase [Oryza sativa
Japonica Group]
gi|108706351|gb|ABF94146.1| Rf1 protein, mitochondrial precursor, putative [Oryza sativa
Japonica Group]
gi|125585039|gb|EAZ25703.1| hypothetical protein OsJ_09536 [Oryza sativa Japonica Group]
Length = 648
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 49/99 (49%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
M+ A R+G E L +K K +V NS+L CR+G + V +++D+
Sbjct: 197 MVDARFRAGDAEAAMALVDSMVSKGLKPGIVTYNSVLKGLCRSGMWDKAWEVFKEMDDFG 256
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPE 99
++PD +F ILI FC+ A + +M +G +P+
Sbjct: 257 VAPDVRSFTILIGGFCRVGEIEEALKIYKEMRHRGIKPD 295
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 31/128 (24%), Positives = 61/128 (47%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
M+ +C++ F++ + + E + DVV N M+ A R GD E+ M ++ +
Sbjct: 162 MVHNYCKALEFDKVDAVISEMEKRCVFPDVVTHNVMVDARFRAGDAEAAMALVDSMVSKG 221
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ P T++ ++K C+ M+ A+ +M G P+ + LI ++ EAL
Sbjct: 222 LKPGIVTYNSVLKGLCRSGMWDKAWEVFKEMDDFGVAPDVRSFTILIGGFCRVGEIEEAL 281
Query: 121 SVYNMLRY 128
+Y +R+
Sbjct: 282 KIYKEMRH 289
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 32/127 (25%), Positives = 60/127 (47%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I FCR G EE ++ + + K D+V + ++ + R G M+ M +R++
Sbjct: 267 LIGGFCRVGEIEEALKIYKEMRHRGIKPDLVSFSCLIGLFARRGKMDHAMAYLREMRCFG 326
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ PD + ++I FC+ + A R +M G P+ ++L+ L K R +A
Sbjct: 327 LVPDGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCKERRLLDAE 386
Query: 121 SVYNMLR 127
+ N +R
Sbjct: 387 GLLNEMR 393
Score = 42.0 bits (97), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 26/107 (24%), Positives = 50/107 (46%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I +C G ++ QL + + D+V N+++ CR GD++ + +
Sbjct: 407 LIHGYCIEGKLDKALQLFDTMLNQRLRPDIVTYNTLIDGMCRQGDLDKANDLWDDMHSRE 466
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLI 107
I P++ T+ ILI C++ A+ + +M KG P +S+I
Sbjct: 467 IFPNHVTYSILIDSHCEKGQVEDAFGFLDEMINKGILPNIMTYNSII 513
Score = 40.8 bits (94), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 24/99 (24%), Positives = 49/99 (49%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I + C G E+ + K +++ NS++ YCR+G++ ++K+
Sbjct: 477 LIDSHCEKGQVEDAFGFLDEMINKGILPNIMTYNSIIKGYCRSGNVSKGQKFLQKMMVNK 536
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPE 99
+SPD T++ LI + KE A++ + M ++ QP+
Sbjct: 537 VSPDLITYNTLIHGYIKEDKMHDAFKLLNMMEKEKVQPD 575
Score = 39.7 bits (91), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 26/122 (21%), Positives = 55/122 (45%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ CRSG +++ ++ + + DV ++ +CR G++E + + +++
Sbjct: 232 VLKGLCRSGMWDKAWEVFKEMDDFGVAPDVRSFTILIGGFCRVGEIEEALKIYKEMRHRG 291
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
I PD +F LI F + A + +M G P+ + + +I + S+AL
Sbjct: 292 IKPDLVSFSCLIGLFARRGKMDHAMAYLREMRCFGLVPDGVIYTMVIGGFCRAGLMSDAL 351
Query: 121 SV 122
V
Sbjct: 352 RV 353
Score = 37.7 bits (86), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 20/76 (26%), Positives = 37/76 (48%), Gaps = 2/76 (2%)
Query: 29 DVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYMLAYRTM 88
D V+ ++ +CR G M + V ++ PD T++ L+ CKE+ + A +
Sbjct: 330 DGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCKERRLLDAEGLL 389
Query: 89 VDMHRKGHQPEEELCS 104
+M +G P +LC+
Sbjct: 390 NEMRERGVPP--DLCT 403
Score = 37.4 bits (85), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 38/81 (46%), Gaps = 6/81 (7%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYC---RTGDMESVMHVMRKLD 57
+I FCR+G + ++ + DVV N++L C R D E +++ MR
Sbjct: 337 VIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCKERRLLDAEGLLNEMR--- 393
Query: 58 ELAISPDYNTFHILIKYFCKE 78
E + PD TF LI +C E
Sbjct: 394 ERGVPPDLCTFTTLIHGYCIE 414
>gi|15228763|ref|NP_188886.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75223290|sp|Q6NQ83.1|PP247_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g22470, mitochondrial; Flags: Precursor
gi|34365775|gb|AAQ65199.1| At3g22470 [Arabidopsis thaliana]
gi|51968798|dbj|BAD43091.1| hypothetical protein [Arabidopsis thaliana]
gi|332643122|gb|AEE76643.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 619
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/126 (27%), Positives = 59/126 (46%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I + C+ G F++ L + E K K DVV +S++ C G + ++R++
Sbjct: 251 VIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRN 310
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
I PD TF LI F KE + A +M +G P+ +SLI K EA
Sbjct: 311 IIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEAN 370
Query: 121 SVYNML 126
+++++
Sbjct: 371 QMFDLM 376
Score = 53.1 bits (126), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 31/155 (20%), Positives = 72/155 (46%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I FC+ C E Q+ +K + D+V + ++ +YC+ ++ M + R++
Sbjct: 356 LIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKG 415
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ P+ T++ L+ FC+ A +M +G P L+ L ++AL
Sbjct: 416 LIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKAL 475
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLKDAY 155
++ ++ S+ ++ ++ I+H + + + DA+
Sbjct: 476 EIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAW 510
Score = 44.7 bits (104), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 32/125 (25%), Positives = 56/125 (44%), Gaps = 11/125 (8%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I F + G E K+L + + D + NS++ +C+ E+ +H ++ +L
Sbjct: 321 LIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCK----ENCLHEANQMFDLM 376
Query: 61 IS----PDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHL---GKM 113
+S PD T+ ILI +CK K R ++ KG P ++L+ GK+
Sbjct: 377 VSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKL 436
Query: 114 RAHSE 118
A E
Sbjct: 437 NAAKE 441
Score = 38.9 bits (89), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 22/99 (22%), Positives = 46/99 (46%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C G +++ ++ + + DVV ++++ + + G + + ++
Sbjct: 286 LIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRG 345
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPE 99
I+PD T++ LI FCKE A + M KG +P+
Sbjct: 346 IAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPD 384
Score = 38.1 bits (87), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 25/119 (21%), Positives = 51/119 (42%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ FC+SG K+L + ++ VV +L C G++ + + K+ +
Sbjct: 426 LVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSR 485
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEA 119
++ ++I+I C A+ + KG +P+ + +I L K + SEA
Sbjct: 486 MTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEA 544
Score = 38.1 bits (87), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 26/124 (20%), Positives = 52/124 (41%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+++ FC G E L + D+V +++++ C G + + ++ ++ E
Sbjct: 146 LVNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYG 205
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
PD T+ ++ CK LA M + + S +I L K + +AL
Sbjct: 206 FQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDAL 265
Query: 121 SVYN 124
S++N
Sbjct: 266 SLFN 269
Score = 37.4 bits (85), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 34/73 (46%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C + ++ L K K DVV N M+ C+ G + + RK+ E
Sbjct: 496 IIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDG 555
Query: 61 ISPDYNTFHILIK 73
+PD T++ILI+
Sbjct: 556 CTPDDFTYNILIR 568
>gi|297849642|ref|XP_002892702.1| hypothetical protein ARALYDRAFT_471420 [Arabidopsis lyrata subsp.
lyrata]
gi|297338544|gb|EFH68961.1| hypothetical protein ARALYDRAFT_471420 [Arabidopsis lyrata subsp.
lyrata]
Length = 667
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/134 (28%), Positives = 58/134 (43%), Gaps = 3/134 (2%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I + CR GC + L + E K K +V NS++ C+ G + +++ +
Sbjct: 211 IIDSLCRDGCIDAAISLFKEMETKGIKSSLVTYNSLVGGLCKAGKWNDGVQLLKDMTSRK 270
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
I P+ TF++LI F KE A +M KG P +SL+ SEA
Sbjct: 271 IIPNVITFNVLIDVFVKEGKLQEANELYKEMITKGISPNTITYNSLMDGYCMQNRLSEA- 329
Query: 121 SVYNMLRYSKRSMC 134
NML R+ C
Sbjct: 330 --NNMLDLMVRNNC 341
Score = 42.7 bits (99), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 28/127 (22%), Positives = 60/127 (47%)
Query: 29 DVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYMLAYRTM 88
D+V S++ YC+ ++ M + RK+ + + + T+ IL++ FC+ +A
Sbjct: 344 DIVTFTSLIKGYCKVKRVDEGMKLFRKISKRGLVANTVTYSILVQGFCQSGKLEIAEELF 403
Query: 89 VDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVYNMLRYSKRSMCKALHEKILHILISG 148
+M G P+ L+ L +AL ++ L+ SK ++ ++ I+ + G
Sbjct: 404 QEMVSLGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMNLDIVMYTIIIEGMCKG 463
Query: 149 KLLKDAY 155
++DA+
Sbjct: 464 GKVEDAW 470
Score = 42.0 bits (97), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 27/122 (22%), Positives = 52/122 (42%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ C E L + +VV NS++ C++GD + ++RK+DE
Sbjct: 141 LINGLCLESKVSEAVVLVARMVENGCQPNVVTYNSIVNGICKSGDTSLALDLLRKMDERN 200
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ D T+ +I C++ A +M KG + +SL+ L K ++ +
Sbjct: 201 VKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSLVTYNSLVGGLCKAGKWNDGV 260
Query: 121 SV 122
+
Sbjct: 261 QL 262
Score = 41.2 bits (95), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 26/133 (19%), Positives = 62/133 (46%), Gaps = 2/133 (1%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ C++G + + QL D ++ +V+ N ++ + + G ++ + +++
Sbjct: 246 LVGGLCKAGKWNDGVQLLKDMTSRKIIPNVITFNVLIDVFVKEGKLQEANELYKEMITKG 305
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
ISP+ T++ L+ +C + A + M R P+ +SLI K++ E +
Sbjct: 306 ISPNTITYNSLMDGYCMQNRLSEANNMLDLMVRNNCSPDIVTFTSLIKGYCKVKRVDEGM 365
Query: 121 SVYNMLRYSKRSM 133
++ + SKR +
Sbjct: 366 KLFR--KISKRGL 376
Score = 35.8 bits (81), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 41/95 (43%)
Query: 28 YDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYMLAYRT 87
+++ LN M+ +CR V+ K+ +L PD TF+ LI C E A
Sbjct: 98 HNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLINGLCLESKVSEAVVL 157
Query: 88 MVDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSV 122
+ M G QP +S++ + K S AL +
Sbjct: 158 VARMVENGCQPNVVTYNSIVNGICKSGDTSLALDL 192
>gi|449463537|ref|XP_004149490.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At2g02150-like [Cucumis sativus]
Length = 786
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/124 (27%), Positives = 53/124 (42%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I + + G EE L + + D++ N ++ YC+ M ++
Sbjct: 330 LIDGYGKVGSLEEVASLFNEMKDVGCVPDIITYNGLINCYCKFEKMPRAFEYFSEMKNNG 389
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ P+ T+ LI FCKE M A + VDM R G P E +SLI K +EA
Sbjct: 390 LKPNVVTYSTLIDAFCKEGMMQGAIKLFVDMRRTGLLPNEFTYTSLIDANCKAGNLTEAW 449
Query: 121 SVYN 124
+ N
Sbjct: 450 KLLN 453
Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 29/107 (27%), Positives = 50/107 (46%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
MI C+ G E +++L DVV NS++ Y + G +E V + ++ ++
Sbjct: 295 MIDYLCKEGDLENSRRLFVQMREMGLSPDVVTYNSLIDGYGKVGSLEEVASLFNEMKDVG 354
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLI 107
PD T++ LI +CK + A+ +M G +P S+LI
Sbjct: 355 CVPDIITYNGLINCYCKFEKMPRAFEYFSEMKNNGLKPNVVTYSTLI 401
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/124 (23%), Positives = 58/124 (46%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C++ C E K+L + + + D+ +++ + G+++ + ++ ++ ELA
Sbjct: 645 LIDGLCKNNCIESAKKLFDEMQCRGMTPDITAFTALIDGNLKHGNLQEALVLISRMTELA 704
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
I D + + L+ F + A + +M KG PEE LC L+ K EA+
Sbjct: 705 IEFDLHVYTSLVSGFSQCGELHQARKFFNEMIEKGILPEEVLCICLLREYYKRGQLDEAI 764
Query: 121 SVYN 124
+ N
Sbjct: 765 ELKN 768
Score = 42.0 bits (97), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 25/94 (26%), Positives = 45/94 (47%)
Query: 34 NSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHR 93
N +L ++G+ + V + I+P T++++I Y CKE + R V M
Sbjct: 258 NFLLHRLSKSGNGQLVRKFFNDMIGAGIAPSVFTYNVMIDYLCKEGDLENSRRLFVQMRE 317
Query: 94 KGHQPEEELCSSLIFHLGKMRAHSEALSVYNMLR 127
G P+ +SLI GK+ + E S++N ++
Sbjct: 318 MGLSPDVVTYNSLIDGYGKVGSLEEVASLFNEMK 351
Score = 39.3 bits (90), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 35/164 (21%), Positives = 72/164 (43%), Gaps = 12/164 (7%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C EETK + + +++ + V+ +++ AY + G ++ +++ ++
Sbjct: 540 IIWGHCSQRKLEETKLILEEMKSRGISANPVISTTIIDAYFKAGKSSDALNFFQEMQDVG 599
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ T+ +LI CK + LA M G QP + +SLI L K A
Sbjct: 600 VEATIVTYCVLIDGLCKAGIVELAVDYFCRMLSLGLQPNVAVYTSLIDGLCKNNCIESAK 659
Query: 121 SVYNMLRYSKRSMCKALHEKI--LHILISGKL----LKDAYIVV 158
+++ ++ C+ + I LI G L L++A +++
Sbjct: 660 KLFDEMQ------CRGMTPDITAFTALIDGNLKHGNLQEALVLI 697
Score = 38.9 bits (89), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 26/108 (24%), Positives = 48/108 (44%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I A C++G E +L D K ++V ++L C+ G M V R + +
Sbjct: 435 LIDANCKAGNLTEAWKLLNDMLQAGVKLNIVTYTALLDGLCKAGRMIEAEEVFRSMLKDG 494
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIF 108
ISP+ + L+ + K + A + + M +P+ L S+I+
Sbjct: 495 ISPNQQVYTALVHGYIKAERMEDAMKILKQMTECNIKPDLILYGSIIW 542
Score = 38.5 bits (88), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 29/133 (21%), Positives = 63/133 (47%)
Query: 27 KYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYMLAYR 86
K +VV ++++ A+C+ G M+ + + + + P+ T+ LI CK A++
Sbjct: 391 KPNVVTYSTLIDAFCKEGMMQGAIKLFVDMRRTGLLPNEFTYTSLIDANCKAGNLTEAWK 450
Query: 87 TMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVYNMLRYSKRSMCKALHEKILHILI 146
+ DM + G + ++L+ L K EA V+ + S + ++ ++H I
Sbjct: 451 LLNDMLQAGVKLNIVTYTALLDGLCKAGRMIEAEEVFRSMLKDGISPNQQVYTALVHGYI 510
Query: 147 SGKLLKDAYIVVK 159
+ ++DA ++K
Sbjct: 511 KAERMEDAMKILK 523
>gi|115466100|ref|NP_001056649.1| Os06g0125300 [Oryza sativa Japonica Group]
gi|6983867|dbj|BAA90802.1| salt-inducible protein-like [Oryza sativa Japonica Group]
gi|113594689|dbj|BAF18563.1| Os06g0125300 [Oryza sativa Japonica Group]
gi|125553869|gb|EAY99474.1| hypothetical protein OsI_21443 [Oryza sativa Indica Group]
gi|125595884|gb|EAZ35664.1| hypothetical protein OsJ_19951 [Oryza sativa Japonica Group]
Length = 535
Score = 54.3 bits (129), Expect = 2e-05, Method: Composition-based stats.
Identities = 31/131 (23%), Positives = 67/131 (51%), Gaps = 3/131 (2%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++SA+C G E ++L D A + DV + ++ YC+ G+++ +M +++
Sbjct: 234 VLSAYCGKGDIEGAQKLFDDIIASGRRPDVTMYTVLIDGYCQCGNLQDAARIMDEMEAAR 293
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ P+ T+ ++I+ CKE+ + A M +M G+ P+ L + ++ L + EA
Sbjct: 294 VQPNEVTYSVVIEACCKEEKPIEARDFMREMLGAGYVPDTALGAKVVDVLCQDGKSEEA- 352
Query: 121 SVYNMLRYSKR 131
Y + R+ ++
Sbjct: 353 --YQLWRWMEK 361
Score = 40.0 bits (92), Expect = 0.33, Method: Composition-based stats.
Identities = 24/79 (30%), Positives = 35/79 (44%)
Query: 29 DVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYMLAYRTM 88
DVV ++L AYC GD+E + + PD + +LI +C+ A R M
Sbjct: 227 DVVTYTTVLSAYCGKGDIEGAQKLFDDIIASGRRPDVTMYTVLIDGYCQCGNLQDAARIM 286
Query: 89 VDMHRKGHQPEEELCSSLI 107
+M QP E S +I
Sbjct: 287 DEMEAARVQPNEVTYSVVI 305
Score = 38.1 bits (87), Expect = 1.3, Method: Composition-based stats.
Identities = 26/114 (22%), Positives = 47/114 (41%), Gaps = 1/114 (0%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C++G E + L + E + K ++ NS++ C +++ V + E
Sbjct: 374 LIYWLCKNGMVREARNLFDELERGF-KPSLLTYNSLISGLCENEELQEAGRVWDDMVERG 432
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMR 114
P+ T+ LIK CK +M +G +P L L+ L + R
Sbjct: 433 YEPNAMTYEALIKGLCKTGKPNEGATVFEEMVSRGCKPSSLLFQVLVDSLSEPR 486
>gi|297847648|ref|XP_002891705.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297337547|gb|EFH67964.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 823
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/107 (28%), Positives = 56/107 (52%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I F RSG F+E +++ K K DVV N+M+ +CR+G ++ + M +++E
Sbjct: 491 LIDGFIRSGDFDEARKVFTLSVEKGVKVDVVHHNAMIKGFCRSGMLDEALACMNRMNEEH 550
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLI 107
+ PD T+ +I + K++ A + DM + +P +SLI
Sbjct: 551 LVPDKFTYSTIIDGYVKQQDMATAIKIFRDMEKNKCKPNVVTYTSLI 597
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 48/95 (50%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
M+ C G EE ++L D K ++V N+++ YC+ GD+E+ V ++L
Sbjct: 211 MVKGMCSEGKVEEGRKLIEDRWGKGCVPNIVFYNTIIGGYCKLGDIENAKLVFKELKLKG 270
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKG 95
P TF +I FCK+ ++ + R + ++ +G
Sbjct: 271 FMPTLETFGTMINGFCKKGDFVASDRLLEEVKERG 305
Score = 44.3 bits (103), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 27/112 (24%), Positives = 49/112 (43%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
MI FCRSG +E ++ D ++++ Y + DM + + + R +++
Sbjct: 526 MIKGFCRSGMLDEALACMNRMNEEHLVPDKFTYSTIIDGYVKQQDMATAIKIFRDMEKNK 585
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGK 112
P+ T+ LI FC + + LA T +M + P ++LI K
Sbjct: 586 CKPNVVTYTSLINGFCCQGDFSLAEETFKEMQSRDLVPNVVTYTTLIRSFAK 637
Score = 38.9 bits (89), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 45/95 (47%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
MI+ FC+ G F + +L + + + + V LN+++ A R G +R +
Sbjct: 281 MINGFCKKGDFVASDRLLEEVKERGLRVCVWFLNNIIDAKYRHGFKVDPAESIRWIVAND 340
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKG 95
PD T++ILI CKE +A + + +KG
Sbjct: 341 CKPDIATYNILINRLCKEGKKEVAAGLLDEASKKG 375
Score = 38.1 bits (87), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 26/125 (20%), Positives = 58/125 (46%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I A+C+S ++ +L + K D+V ++ +G M+ +++ KL +
Sbjct: 386 LIQAYCKSKEYDIASKLLLQLAERGCKPDIVTYGILIHGLVVSGHMDDAVNMKVKLIDRG 445
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+SPD +++L+ CK ++ A +M + P+ + ++LI + EA
Sbjct: 446 VSPDAAIYNMLMSGLCKTGRFLPAKLLFSEMLDRSILPDAYVYATLIDGFIRSGDFDEAR 505
Query: 121 SVYNM 125
V+ +
Sbjct: 506 KVFTL 510
>gi|11994279|dbj|BAB01462.1| unnamed protein product [Arabidopsis thaliana]
Length = 648
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/126 (27%), Positives = 59/126 (46%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I + C+ G F++ L + E K K DVV +S++ C G + ++R++
Sbjct: 280 VIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRN 339
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
I PD TF LI F KE + A +M +G P+ +SLI K EA
Sbjct: 340 IIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEAN 399
Query: 121 SVYNML 126
+++++
Sbjct: 400 QMFDLM 405
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 31/155 (20%), Positives = 72/155 (46%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I FC+ C E Q+ +K + D+V + ++ +YC+ ++ M + R++
Sbjct: 385 LIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKG 444
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ P+ T++ L+ FC+ A +M +G P L+ L ++AL
Sbjct: 445 LIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKAL 504
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLKDAY 155
++ ++ S+ ++ ++ I+H + + + DA+
Sbjct: 505 EIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAW 539
Score = 44.7 bits (104), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 32/125 (25%), Positives = 56/125 (44%), Gaps = 11/125 (8%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I F + G E K+L + + D + NS++ +C+ E+ +H ++ +L
Sbjct: 350 LIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCK----ENCLHEANQMFDLM 405
Query: 61 IS----PDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHL---GKM 113
+S PD T+ ILI +CK K R ++ KG P ++L+ GK+
Sbjct: 406 VSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKL 465
Query: 114 RAHSE 118
A E
Sbjct: 466 NAAKE 470
Score = 38.9 bits (89), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 22/99 (22%), Positives = 46/99 (46%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C G +++ ++ + + DVV ++++ + + G + + ++
Sbjct: 315 LIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRG 374
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPE 99
I+PD T++ LI FCKE A + M KG +P+
Sbjct: 375 IAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPD 413
Score = 38.1 bits (87), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 25/119 (21%), Positives = 51/119 (42%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ FC+SG K+L + ++ VV +L C G++ + + K+ +
Sbjct: 455 LVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSR 514
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEA 119
++ ++I+I C A+ + KG +P+ + +I L K + SEA
Sbjct: 515 MTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEA 573
Score = 38.1 bits (87), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 26/124 (20%), Positives = 52/124 (41%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+++ FC G E L + D+V +++++ C G + + ++ ++ E
Sbjct: 175 LVNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYG 234
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
PD T+ ++ CK LA M + + S +I L K + +AL
Sbjct: 235 FQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDAL 294
Query: 121 SVYN 124
S++N
Sbjct: 295 SLFN 298
Score = 37.7 bits (86), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 34/73 (46%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C + ++ L K K DVV N M+ C+ G + + RK+ E
Sbjct: 525 IIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDG 584
Query: 61 ISPDYNTFHILIK 73
+PD T++ILI+
Sbjct: 585 CTPDDFTYNILIR 597
>gi|449437410|ref|XP_004136485.1| PREDICTED: pentatricopeptide repeat-containing protein At1g20300,
mitochondrial-like [Cucumis sativus]
gi|449519964|ref|XP_004167004.1| PREDICTED: pentatricopeptide repeat-containing protein At1g20300,
mitochondrial-like [Cucumis sativus]
Length = 534
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/137 (27%), Positives = 63/137 (45%), Gaps = 6/137 (4%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+IS C+ E + + + K++ DV++ S++ +CR GD+ V R++
Sbjct: 224 VISILCKKRRAVEAQSFFDNLKHKFEP-DVIVYTSLVHGWCRAGDISEAESVFREMKMAG 282
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLI-FHLGKMRAHSEA 119
ISP+ T+ I+I C+ A+ +M G P ++LI HL R +
Sbjct: 283 ISPNVYTYSIVIDALCRSGQITRAHDVFAEMLDAGCNPNSVTFNNLIRVHLRAGRTE-KV 341
Query: 120 LSVYNMLRYSKRSMCKA 136
L VYN + KR C A
Sbjct: 342 LQVYNQM---KRLRCAA 355
Score = 37.0 bits (84), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 23/99 (23%), Positives = 42/99 (42%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I A CRSG + + + V N+++ + R G E V+ V ++ L
Sbjct: 293 VIDALCRSGQITRAHDVFAEMLDAGCNPNSVTFNNLIRVHLRAGRTEKVLQVYNQMKRLR 352
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPE 99
+ D T++ LI+ CK+ A + + M + P
Sbjct: 353 CAADLITYNFLIETHCKDDNLGEAIKVLNSMAKNDCTPN 391
>gi|413948659|gb|AFW81308.1| hypothetical protein ZEAMMB73_549819 [Zea mays]
Length = 795
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 77/160 (48%), Gaps = 6/160 (3%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I F + G ++ L + + DVV NS++ C+ M+ + +++ + +
Sbjct: 206 VIDGFFKEGEVDKAYFLFHEMMGQGLPPDVVTYNSLIDGLCKAQAMDKAVAILQHMFDKG 265
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ PD T++I+I+ +C A R + M G QP+ S LI + K+ +EA
Sbjct: 266 VMPDTRTYNIMIRGYCSLGQLEEAVRLLKKMSGSGLQPDVVTYSLLIQYYCKIGRCAEAR 325
Query: 121 SVYN-MLRYSKRSMCKALHEKILHILISGKLLKDAYIVVK 159
SV++ M+R ++ + I HIL+ G K A I V+
Sbjct: 326 SVFDSMVRKGQKP-----NSTIYHILLHGYATKGALIDVR 360
Score = 39.3 bits (90), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 36/155 (23%), Positives = 64/155 (41%), Gaps = 2/155 (1%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
MI +C G EE +L + DVV + ++ YC+ G V +
Sbjct: 276 MIRGYCSLGQLEEAVRLLKKMSGSGLQPDVVTYSLLIQYYCKIGRCAEARSVFDSMVRKG 335
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVD-MHRKGHQPEEELCSSLIFHLGKMRAHSEA 119
P+ +HIL+ + K ++ R ++D M R G E + LI K A +A
Sbjct: 336 QKPNSTIYHILLHGYAT-KGALIDVRDLLDLMIRDGIPFEHRAFNILICAYAKHGAVDKA 394
Query: 120 LSVYNMLRYSKRSMCKALHEKILHILISGKLLKDA 154
++ + +R + + ++HIL ++DA
Sbjct: 395 MTAFTEMRQNGLRPDVVSYSTVIHILCKTGRVEDA 429
>gi|297809453|ref|XP_002872610.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297318447|gb|EFH48869.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 575
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/154 (22%), Positives = 73/154 (47%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++S FCR G ++ + E + K V ++ + R+ +ME+ + + ++EL
Sbjct: 379 LVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMETAIQLRSSMEELG 438
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ PD +T+ +LI FC + A R M K +P E + +++I K + AL
Sbjct: 439 LVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKMLEPNEVIYNTMILGYCKEGSSYRAL 498
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLKDA 154
++ + + + A + ++ +L + LK+A
Sbjct: 499 RLFRDMEEKELAPNVASYSYLIRVLCKERKLKEA 532
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 26/104 (25%), Positives = 49/104 (47%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I FC G E +L K + + V+ N+M+ YC+ G + + R ++E
Sbjct: 449 LIHGFCIKGQMNEASRLFKSMVEKMLEPNEVIYNTMILGYCKEGSSYRALRLFRDMEEKE 508
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCS 104
++P+ ++ LI+ CKE+ A + M G P + +C+
Sbjct: 509 LAPNVASYSYLIRVLCKERKLKEAEDLVEKMIDSGIDPSDTICN 552
Score = 45.8 bits (107), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/107 (25%), Positives = 46/107 (42%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I FC G + L D +++ +V N ++ +CR GD ++++++E
Sbjct: 344 LIDGFCSVGKLGKALSLCRDLKSRGLSPSLVTYNVLVSGFCRKGDTSGAAKMVKEMEERG 403
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLI 107
I P T+ ILI F + A + M G P+ S LI
Sbjct: 404 IKPSKVTYTILIDTFARSDNMETAIQLRSSMEELGLVPDVHTYSVLI 450
Score = 42.7 bits (99), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 21/107 (19%), Positives = 50/107 (46%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I CR E ++ ++ +++ N+++ +C G + + + R L
Sbjct: 309 LIGGLCREMKANEANKVMDQMKSYVINPNLITYNTLIDGFCSVGKLGKALSLCRDLKSRG 368
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLI 107
+SP T+++L+ FC++ A + + +M +G +P + + LI
Sbjct: 369 LSPSLVTYNVLVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILI 415
>gi|356498456|ref|XP_003518068.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At2g17525, mitochondrial-like, partial [Glycine
max]
Length = 435
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/95 (25%), Positives = 48/95 (50%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ C GC E ++ E+ DVV N+++ +C G+++ +H +++++
Sbjct: 105 VLEILCNVGCTIEAAEVLDXIESMGGLLDVVAXNTLIKGFCEAGNVKVGLHFLKQMESKG 164
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKG 95
P+ +T+++LI FC+ KM L DM G
Sbjct: 165 CLPNVDTYNVLISGFCESKMLDLVLDLFNDMKTDG 199
>gi|224103543|ref|XP_002313097.1| predicted protein [Populus trichocarpa]
gi|222849505|gb|EEE87052.1| predicted protein [Populus trichocarpa]
Length = 751
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/123 (25%), Positives = 62/123 (50%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ F + G +E ++ + +V N++L +C +G ME + ++R ++
Sbjct: 384 LINGFSQKGFMDEAYRIWDEMIRSGFPPTIVTYNALLNGHCVSGRMEEAIGLLRGMEGKG 443
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+SPD ++ +I FC+ + A++ +M KG P+ SSLI L + R +EA
Sbjct: 444 LSPDVVSYSTIIAGFCRYQELDRAFQMNAEMVEKGVSPDAITYSSLIQGLCEQRRLNEAC 503
Query: 121 SVY 123
++
Sbjct: 504 DLF 506
Score = 52.0 bits (123), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 33/128 (25%), Positives = 57/128 (44%), Gaps = 1/128 (0%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ CR G EET + + + K D V N+++ YC+ G+ + + ++
Sbjct: 279 VINGLCRVGRIEETSGVLAEMDRKGFAPDGVTYNTLVNGYCKVGNFHQALVLHSEMLRNG 338
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ PD T+ LI CK A MH +G +P +SLI + EA
Sbjct: 339 LPPDVVTYTSLINTMCKAGNLNRAMEFFDQMHVRGLRPNGVTYTSLINGFSQKGFMDEAY 398
Query: 121 SVYN-MLR 127
+++ M+R
Sbjct: 399 RIWDEMIR 406
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/124 (26%), Positives = 61/124 (49%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+++ C SG EE L E K DVV ++++ +CR +++ + ++ E
Sbjct: 419 LLNGHCVSGRMEEAIGLLRGMEGKGLSPDVVSYSTIIAGFCRYQELDRAFQMNAEMVEKG 478
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+SPD T+ LI+ C+++ A +M K P+E +SLI K +EAL
Sbjct: 479 VSPDAITYSSLIQGLCEQRRLNEACDLFQEMLNKSLLPDEFTYTSLINGYCKEGDLNEAL 538
Query: 121 SVYN 124
++++
Sbjct: 539 NLHD 542
Score = 44.3 bits (103), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 29/128 (22%), Positives = 61/128 (47%), Gaps = 1/128 (0%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I FC +G E + + E +VV N+++ AYC+ ++ ++R +
Sbjct: 209 LIRGFCAAGNLEMGLRFFEEMERNRCLPNVVTYNTVIGAYCKLKRIDEAFKLLRSMGLEG 268
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ P+ T++++I C+ + +M RKG P+ ++L+ K+ +AL
Sbjct: 269 LEPNLLTYNMVINGLCRVGRIEETSGVLAEMDRKGFAPDGVTYNTLVNGYCKVGNFHQAL 328
Query: 121 SVYN-MLR 127
+++ MLR
Sbjct: 329 VLHSEMLR 336
Score = 43.9 bits (102), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 28/126 (22%), Positives = 59/126 (46%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I A+C+ +E +L + + +++ N ++ CR G +E V+ ++D
Sbjct: 244 VIGAYCKLKRIDEAFKLLRSMGLEGLEPNLLTYNMVINGLCRVGRIEETSGVLAEMDRKG 303
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+PD T++ L+ +CK + A +M R G P+ +SLI + K + A+
Sbjct: 304 FAPDGVTYNTLVNGYCKVGNFHQALVLHSEMLRNGLPPDVVTYTSLINTMCKAGNLNRAM 363
Query: 121 SVYNML 126
++ +
Sbjct: 364 EFFDQM 369
Score = 42.7 bits (99), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 23/98 (23%), Positives = 43/98 (43%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+++ +C+ G F + L + DVV S++ C+ G++ M ++
Sbjct: 314 LVNGYCKVGNFHQALVLHSEMLRNGLPPDVVTYTSLINTMCKAGNLNRAMEFFDQMHVRG 373
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQP 98
+ P+ T+ LI F ++ AYR +M R G P
Sbjct: 374 LRPNGVTYTSLINGFSQKGFMDEAYRIWDEMIRSGFPP 411
Score = 37.4 bits (85), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 28/119 (23%), Positives = 50/119 (42%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ FCR + Q+ + K D + +S++ C + + +++ +
Sbjct: 454 IIAGFCRYQELDRAFQMNAEMVEKGVSPDAITYSSLIQGLCEQRRLNEACDLFQEMLNKS 513
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEA 119
+ PD T+ LI +CKE A +M +KG P+ + LI L K EA
Sbjct: 514 LLPDEFTYTSLINGYCKEGDLNEALNLHDEMIKKGFLPDTVTYNVLINGLNKQARTREA 572
>gi|414869870|tpg|DAA48427.1| TPA: hypothetical protein ZEAMMB73_860756 [Zea mays]
gi|414869871|tpg|DAA48428.1| TPA: hypothetical protein ZEAMMB73_860756 [Zea mays]
Length = 741
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 56/119 (47%), Gaps = 1/119 (0%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I A C+ G EE +Q G K K + V+ SM+ A C++G + ++M+K+
Sbjct: 325 LIDALCKHGRIEEAQQFLGSLVQKGIKVNQVIYTSMIDALCKSGKFDGAHNLMQKIITEG 384
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIF-HLGKMRAHSE 118
PD + + LI C+E + A + DM G Q + LI HL + R+ S
Sbjct: 385 FVPDAHMYSSLIDGLCRENKLLEAISLLNDMIESGVQANAVPFTILIDKHLREFRSDSP 443
Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 29/112 (25%), Positives = 52/112 (46%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I +C +G E + ++K +V ++C +C++G +E M + ++ E
Sbjct: 220 LIDGYCSTGDLELAIDIFKGMQSKGCLPNVRTYTQLICGFCKSGKVERAMVLYSRMIEAG 279
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGK 112
++P+ T+ LI+ C E A+R + M G P E C LI L K
Sbjct: 280 LAPNVVTYTTLIQGQCSEGHLEHAFRLLHSMEACGLAPNEWTCLVLIDALCK 331
Score = 42.7 bits (99), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 25/93 (26%), Positives = 43/93 (46%), Gaps = 3/93 (3%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
M+ C +G E L D K +V + N+++ YC TGD+E + + + +
Sbjct: 185 MVHGLCGAGRAGEAVALLTDAMGKGFVPNVAVYNALIDGYCSTGDLELAIDIFKGMQSKG 244
Query: 61 ISPDYNTFHILIKYFCKE---KMYMLAYRTMVD 90
P+ T+ LI FCK + M+ Y M++
Sbjct: 245 CLPNVRTYTQLICGFCKSGKVERAMVLYSRMIE 277
Score = 42.0 bits (97), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 22/90 (24%), Positives = 44/90 (48%)
Query: 12 EETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHIL 71
+ K ++ A K DVV + +YC+ G ME +M ++ + + P+ T++ L
Sbjct: 441 DSPKMISDRMAAAGVKPDVVTYTVFIRSYCQDGRMEDAESMMIQMIDHGVRPNLTTYNTL 500
Query: 72 IKYFCKEKMYMLAYRTMVDMHRKGHQPEEE 101
IK + + A+ ++ +M G +P +E
Sbjct: 501 IKGYANLGLVSQAFSSLKNMIDNGCKPNDE 530
>gi|357491947|ref|XP_003616261.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355517596|gb|AES99219.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 811
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/107 (26%), Positives = 52/107 (48%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ CR G +E ++L + K D + +++ C+ GDM+S + + ++ E
Sbjct: 372 LINGLCRDGDLKEARKLLNEMIGNGFKPDKITFTTLMDGCCKDGDMDSALEIKDRMVEEG 431
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLI 107
I D F LI C++ A R + DM GH+P++ + +I
Sbjct: 432 IELDDVAFTALISGLCRDGRVRDAERMLKDMLSAGHKPDDPTYTMVI 478
Score = 40.4 bits (93), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 26/107 (24%), Positives = 47/107 (43%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ FC+ G + + + + + VV N+++ YCR+ ++E + ++
Sbjct: 232 LMHGFCKIGDVMNARMVFDEISRRGLRPSVVSFNTLISGYCRSKNVEEGFVLKSVMESER 291
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLI 107
ISPD T+ LI CKE A +M G P ++LI
Sbjct: 292 ISPDVFTYSALINGLCKESRVEEANGLFDEMCEMGLVPNGVTFTTLI 338
Score = 36.2 bits (82), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 18/77 (23%), Positives = 39/77 (50%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I FC+ G + +L + + VV N+++ +C+ G M++ ++ + +
Sbjct: 477 VIDCFCKKGDVKMGAKLLKEMQRDGRVPGVVTYNALMNGFCKQGQMKNAKMLLHAMLNME 536
Query: 61 ISPDYNTFHILIKYFCK 77
+ P+ TF+IL+ CK
Sbjct: 537 VVPNDITFNILLDGHCK 553
>gi|15229026|ref|NP_190450.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75183419|sp|Q9M302.1|PP270_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g48810
gi|7576219|emb|CAB87909.1| putative protein [Arabidopsis thaliana]
gi|332644937|gb|AEE78458.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 659
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/126 (26%), Positives = 58/126 (46%), Gaps = 5/126 (3%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+IS+ C G +E ++LA FE Y N+++ C+ D + +MR++ E
Sbjct: 222 VISSMCEVGLVKEGRELAERFEPVVSVY-----NALINGLCKEHDYKGAFELMREMVEKG 276
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
ISP+ ++ LI C LA+ + M ++G P SSL+ +AL
Sbjct: 277 ISPNVISYSTLINVLCNSGQIELAFSFLTQMLKRGCHPNIYTLSSLVKGCFLRGTTFDAL 336
Query: 121 SVYNML 126
++N +
Sbjct: 337 DLWNQM 342
>gi|356529465|ref|XP_003533312.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Glycine max]
Length = 546
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/107 (28%), Positives = 52/107 (48%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ A C+ G +E K + K DV+ ++++ Y +++ HV + +
Sbjct: 275 LVDALCKEGKVKEAKSVLAVMLKACVKPDVITYSTLMDGYFLVYEVKKAQHVFNAMSLMG 334
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLI 107
++PD +T+ ILI FCK KM A +MH+K P SSLI
Sbjct: 335 VTPDVHTYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLI 381
Score = 43.1 bits (100), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 23/96 (23%), Positives = 42/96 (43%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C+SG L + + DV+ +S++ C+ G ++ + + K+ +
Sbjct: 380 LIDGLCKSGRISYVWDLIDEMRDRGQPADVITYSSLIDGLCKNGHLDRAIALFNKMKDQE 439
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGH 96
I P+ TF IL+ CK A D+ KG+
Sbjct: 440 IRPNIFTFTILLDGLCKGGRLKDAQEVFQDLLTKGY 475
Score = 40.8 bits (94), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 20/78 (25%), Positives = 39/78 (50%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I A C+ E L + K DVV N+++ +C G ++ + ++ ++
Sbjct: 205 IIDAMCKYQLVSEAYGLFSEMAVKGISADVVTYNTLIYGFCIVGKLKEAIGLLNEMVLKT 264
Query: 61 ISPDYNTFHILIKYFCKE 78
I+P+ T++IL+ CKE
Sbjct: 265 INPNVYTYNILVDALCKE 282
Score = 40.0 bits (92), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 26/124 (20%), Positives = 53/124 (42%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C G ++ A+ + + V +++ C+ GD + + +RK+D
Sbjct: 135 LIKGLCLKGQVKKALHFHDKLLAQGFQLNQVSYATLINGVCKIGDTRAAIKFLRKIDGRL 194
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
PD ++ +I CK ++ AY +M KG + ++LI+ + EA+
Sbjct: 195 TKPDVVMYNTIIDAMCKYQLVSEAYGLFSEMAVKGISADVVTYNTLIYGFCIVGKLKEAI 254
Query: 121 SVYN 124
+ N
Sbjct: 255 GLLN 258
Score = 35.8 bits (81), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 16/78 (20%), Positives = 37/78 (47%)
Query: 30 VVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYMLAYRTMV 89
++ N +L ++ + + + + +L+ I PD T +ILI FC + +
Sbjct: 59 IIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLITLNILINCFCHMGQITFGFSVLA 118
Query: 90 DMHRKGHQPEEELCSSLI 107
+ ++G+ P+ ++LI
Sbjct: 119 KILKRGYPPDTVTLNTLI 136
>gi|449449677|ref|XP_004142591.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
mitochondrial-like [Cucumis sativus]
Length = 748
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/127 (25%), Positives = 61/127 (48%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+++ FC G E+ +L G K D + N+++ +C M + + +++
Sbjct: 579 LMNGFCMLGMLEDGDRLLGWMLEKGIVPDAITYNTLMKQHCIRNSMNTTTKIYKRMRNQG 638
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
++PD NT++ILIK CK + A+ +M KG+ P ++LI K + EA
Sbjct: 639 VAPDSNTYNILIKGHCKARNLKEAWFLYKEMIEKGYVPTVTSYNALIKRFYKKKKILEAR 698
Query: 121 SVYNMLR 127
++ +R
Sbjct: 699 ELFEEMR 705
Score = 52.0 bits (123), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 38/165 (23%), Positives = 76/165 (46%), Gaps = 12/165 (7%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
M++ C++G E+ +L + E D + +++ AYCR GD++ +++++ +
Sbjct: 509 MVNGICKAGNIEQAIKLMKEMEVAGIDPDAITYTTVIDAYCRLGDIDKAHKLLQEMLDRG 568
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAH--SE 118
+ P TF++L+ FC M R + M KG P+ ++L M+ H
Sbjct: 569 LQPTVVTFNVLMNGFCMLGMLEDGDRLLGWMLEKGIVPDAITYNTL------MKQHCIRN 622
Query: 119 ALSVYNMLRYSKRSMCKALHEKILHILISG----KLLKDAYIVVK 159
+++ + R+ A +ILI G + LK+A+ + K
Sbjct: 623 SMNTTTKIYKRMRNQGVAPDSNTYNILIKGHCKARNLKEAWFLYK 667
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/98 (24%), Positives = 51/98 (52%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C+ G + +L + K + +V + NSM+ C+ G++E + +M++++
Sbjct: 474 LIDGLCKHGELDTANELLDEMRKKGLQLNVCIYNSMVNGICKAGNIEQAIKLMKEMEVAG 533
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQP 98
I PD T+ +I +C+ A++ + +M +G QP
Sbjct: 534 IDPDAITYTTVIDAYCRLGDIDKAHKLLQEMLDRGLQP 571
Score = 41.6 bits (96), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 27/121 (22%), Positives = 59/121 (48%), Gaps = 3/121 (2%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I + CR G +E +L + + DVV ++++ YC G+++ + +M +
Sbjct: 264 IIYSLCRLGKVKEAHRLLMQMDFRSSTPDVVSYSTVIDGYCHLGELKKALKLMDDMQIKG 323
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLI---FHLGKMRAHS 117
+ P+ T++ +I CK A + + +M + P+ + ++LI F LG +R +
Sbjct: 324 LKPNRYTYNSIILLLCKIGKSFEAEKVLREMMSQKIIPDNVVYTTLIHGFFKLGHVRTAN 383
Query: 118 E 118
+
Sbjct: 384 K 384
Score = 41.2 bits (95), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 23/97 (23%), Positives = 47/97 (48%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I F + G E + L + ++ K D V +++ YC+ G+M + + ++ ++
Sbjct: 404 LIQGFGQGGKVIEPQNLFHEMISRGLKPDEVTYTTLIDVYCKAGEMVNAFSLHNEMVQMG 463
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQ 97
++P+ T+ LI CK A + +M +KG Q
Sbjct: 464 MTPNIVTYGALIDGLCKHGELDTANELLDEMRKKGLQ 500
Score = 36.6 bits (83), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 28/129 (21%), Positives = 56/129 (43%), Gaps = 19/129 (14%)
Query: 28 YDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYMLAYRT 87
++ N ++ + CR G ++ ++ ++D + +PD ++ +I +C A +
Sbjct: 256 WNTTSYNIIIYSLCRLGKVKEAHRLLMQMDFRSSTPDVVSYSTVIDGYCHLGELKKALKL 315
Query: 88 MVDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVYNMLRYSKRSMCKALHEKILHILIS 147
M DM KG +P +S+I L K+ EA EK+L ++S
Sbjct: 316 MDDMQIKGLKPNRYTYNSIILLLCKIGKSFEA-------------------EKVLREMMS 356
Query: 148 GKLLKDAYI 156
K++ D +
Sbjct: 357 QKIIPDNVV 365
>gi|229914885|gb|ACQ90610.1| putative PPR repeat protein [Eutrema halophilum]
Length = 1023
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/107 (25%), Positives = 54/107 (50%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
MI + + G ++T + ++ + DV+ N+++ +C+ G + + R++ +
Sbjct: 174 MIDGYGKVGRLDDTVYFFEEMKSMSCEPDVITYNTLINCFCKFGKLPKGLEFFREMKQSG 233
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLI 107
+ P+ ++ L+ FCKE M A + VDM R G P E +SL+
Sbjct: 234 LKPNVVSYSTLVDAFCKEDMMQQALKFYVDMRRLGLVPNEHTYTSLV 280
Score = 44.3 bits (103), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 31/127 (24%), Positives = 54/127 (42%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
MI C+ G E L + + + D V NSM+ Y + G ++ ++ ++ ++
Sbjct: 139 MIDCMCKEGDIEAASGLFEEMKFRGLIPDTVTYNSMIDGYGKVGRLDDTVYFFEEMKSMS 198
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
PD T++ LI FCK +M + G +P S+L+ K +AL
Sbjct: 199 CEPDVITYNTLINCFCKFGKLPKGLEFFREMKQSGLKPNVVSYSTLVDAFCKEDMMQQAL 258
Query: 121 SVYNMLR 127
Y +R
Sbjct: 259 KFYVDMR 265
>gi|255540069|ref|XP_002511099.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223550214|gb|EEF51701.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 1151
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/107 (27%), Positives = 54/107 (50%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+A+CR G EE K + D E K ++V + ++ CR GD++ + + R +
Sbjct: 238 LINAYCRVGKVEEGKHVLFDMEEKGCIPNLVTYSVVIAGLCRAGDVDEALELKRSMANKG 297
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLI 107
+ PD + LI FC++K + +M+ G +P+ ++LI
Sbjct: 298 LLPDNYIYATLIDGFCRQKRSTEGKSMLDEMYTMGLKPDHVAYTALI 344
Score = 48.9 bits (115), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 24/107 (22%), Positives = 50/107 (46%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ + G FEE ++ G + + DV N+++ +C+ G ME + ++
Sbjct: 483 IVKGLVKEGRFEEAIKILGVMKDQGLSPDVFCYNTVIIGFCKAGKMEEGKSYLVEMIAKG 542
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLI 107
+ P+ T+ I +C+ A R+ ++M G P + +C+ LI
Sbjct: 543 LKPNVYTYGAFIHGYCRAGEMQAAERSFIEMLDSGIAPNDVICTDLI 589
Score = 48.5 bits (114), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 35/126 (27%), Positives = 59/126 (46%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I FC++G EE K + AK K +V + + YCR G+M++ ++ +
Sbjct: 518 VIIGFCKAGKMEEGKSYLVEMIAKGLKPNVYTYGAFIHGYCRAGEMQAAERSFIEMLDSG 577
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
I+P+ LI +CK+ A+ M +G P+ + S LI L K EA+
Sbjct: 578 IAPNDVICTDLIDGYCKDGNTTKAFAKFRCMLDQGVLPDVQTHSVLIHGLSKNGKLQEAM 637
Query: 121 SVYNML 126
V++ L
Sbjct: 638 GVFSEL 643
Score = 41.2 bits (95), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 24/94 (25%), Positives = 44/94 (46%)
Query: 29 DVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYMLAYRTM 88
DV +++ AYCR G +E HV+ ++E P+ T+ ++I C+ A
Sbjct: 231 DVYTYTNLINAYCRVGKVEEGKHVLFDMEEKGCIPNLVTYSVVIAGLCRAGDVDEALELK 290
Query: 89 VDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSV 122
M KG P+ + ++LI + + +E S+
Sbjct: 291 RSMANKGLLPDNYIYATLIDGFCRQKRSTEGKSM 324
Score = 39.7 bits (91), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 57/127 (44%), Gaps = 6/127 (4%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDK---YDVVLLNSMLCAYCRTGDMESVMHVMRKLD 57
+I +C+ G TK A F D+ DV + ++ + G ++ M V +L
Sbjct: 588 LIDGYCKDG--NTTKAFA-KFRCMLDQGVLPDVQTHSVLIHGLSKNGKLQEAMGVFSELL 644
Query: 58 ELAISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHS 117
+ + PD T+ LI CKE A+ DM +KG P ++LI L K+ +
Sbjct: 645 DKGLVPDVFTYTSLISNLCKEGDLKAAFELHDDMCKKGINPNIVTYNALINGLCKLGEIA 704
Query: 118 EALSVYN 124
+A +++
Sbjct: 705 KARELFD 711
Score = 37.0 bits (84), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 20/110 (18%), Positives = 51/110 (46%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ F + Q+ + A+ K + +++ C+ GD+E + ++ +
Sbjct: 343 LINGFVKQSDIGGAFQVKEEMFARKIKLNTFTYYALIHGLCKIGDLEKAEDLFSEMTMMG 402
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHL 110
I PD T++ LI+ + K + AY ++++ ++ +C +++ L
Sbjct: 403 IKPDIQTYNCLIEGYYKVQNMEKAYELLIEIKKENLTANAYMCGAIVNGL 452
>gi|357477565|ref|XP_003609068.1| hypothetical protein MTR_4g108600 [Medicago truncatula]
gi|355510123|gb|AES91265.1| hypothetical protein MTR_4g108600 [Medicago truncatula]
Length = 932
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/149 (24%), Positives = 67/149 (44%), Gaps = 8/149 (5%)
Query: 2 ISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAI 61
I C+ G + +L G + + DVV N+++C CR + + K+
Sbjct: 337 IQGLCKEGSLDRAVRLLGCVSREGLRPDVVTYNTVICGLCRKSRVVEAEECLHKMVNGGF 396
Query: 62 SPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEALS 121
P+ T++ +I +CK+ M + A R + D KG +P+E SL+ + +A++
Sbjct: 397 EPNDFTYNSIIDGYCKKGMVVDANRILKDAVFKGFKPDEFTYCSLVNGFCQDGDPDQAMA 456
Query: 122 VYNMLRYSKRSMCKALHEKIL--HILISG 148
V+ K + K L I+ + LI G
Sbjct: 457 VF------KDGLGKGLRPSIIVYNTLIKG 479
Score = 49.7 bits (117), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 28/113 (24%), Positives = 49/113 (43%), Gaps = 8/113 (7%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ C+ GC + L GD K D+ N+++ YCR ++S + ++ ++
Sbjct: 511 IINGLCKMGCLSDANHLIGDAITKGCIPDIFTYNTLVDGYCRQLKLDSAIELVNRMWSQG 570
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPE--------EELCSS 105
++PD T++ L+ CK M KG P E LC+S
Sbjct: 571 MTPDVITYNTLLNGLCKTAKSEEVMEIFKAMTEKGCAPNIITYNTIIESLCNS 623
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/119 (25%), Positives = 56/119 (47%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I +C+ G + ++ D K K D S++ +C+ GD + M V +
Sbjct: 406 IIDGYCKKGMVVDANRILKDAVFKGFKPDEFTYCSLVNGFCQDGDPDQAMAVFKDGLGKG 465
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEA 119
+ P ++ LIK C++ + + A + M +M KG +P+ + +I L KM S+A
Sbjct: 466 LRPSIIVYNTLIKGLCQQGLILPALQLMNEMAEKGCKPDIWTYNLIINGLCKMGCLSDA 524
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/107 (23%), Positives = 49/107 (45%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ +CR + +L ++ DV+ N++L C+T E VM + + + E
Sbjct: 546 LVDGYCRQLKLDSAIELVNRMWSQGMTPDVITYNTLLNGLCKTAKSEEVMEIFKAMTEKG 605
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLI 107
+P+ T++ +I+ C K A + +M KG P+ +LI
Sbjct: 606 CAPNIITYNTIIESLCNSKKVNEAVDLLGEMKSKGLTPDVVSFGTLI 652
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/101 (23%), Positives = 50/101 (49%), Gaps = 1/101 (0%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLD-EL 59
+I + C S E L G+ ++K DVV +++ +C+ GD++ + R ++ +
Sbjct: 616 IIESLCNSKKVNEAVDLLGEMKSKGLTPDVVSFGTLITGFCKVGDLDGAYGLFRGMEKQY 675
Query: 60 AISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEE 100
+S T++I+I F ++ +A R +M + G P+
Sbjct: 676 DVSHTTATYNIIISAFSEQLNMKMALRLFSEMKKNGCDPDN 716
Score = 40.8 bits (94), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 23/99 (23%), Positives = 45/99 (45%), Gaps = 1/99 (1%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYD-KYDVVLLNSMLCAYCRTGDMESVMHVMRKLDEL 59
+I+ FC+ G + L E +YD + N ++ A+ +M+ + + ++ +
Sbjct: 651 LITGFCKVGDLDGAYGLFRGMEKQYDVSHTTATYNIIISAFSEQLNMKMALRLFSEMKKN 710
Query: 60 AISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQP 98
PD T+ +LI FCK Y+ +++ KG P
Sbjct: 711 GCDPDNYTYRVLIDGFCKTGNVNQGYKFLLENIEKGFIP 749
Score = 40.4 bits (93), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 21/99 (21%), Positives = 47/99 (47%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+++ FC+ G ++ + D K + +++ N+++ C+ G + + +M ++ E
Sbjct: 441 LVNGFCQDGDPDQAMAVFKDGLGKGLRPSIIVYNTLIKGLCQQGLILPALQLMNEMAEKG 500
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPE 99
PD T++++I CK A + D KG P+
Sbjct: 501 CKPDIWTYNLIINGLCKMGCLSDANHLIGDAITKGCIPD 539
Score = 38.5 bits (88), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 25/123 (20%), Positives = 50/123 (40%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C+ G QL + K K D+ N ++ C+ G + H++
Sbjct: 476 LIKGLCQQGLILPALQLMNEMAEKGCKPDIWTYNLIINGLCKMGCLSDANHLIGDAITKG 535
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
PD T++ L+ +C++ A + M +G P+ ++L+ L K E +
Sbjct: 536 CIPDIFTYNTLVDGYCRQLKLDSAIELVNRMWSQGMTPDVITYNTLLNGLCKTAKSEEVM 595
Query: 121 SVY 123
++
Sbjct: 596 EIF 598
Score = 37.0 bits (84), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 20/71 (28%), Positives = 36/71 (50%)
Query: 29 DVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYMLAYRTM 88
DV N ++ A C+ G + + K+ + + P+ TF+I I+ CKE A R +
Sbjct: 294 DVTTFNKLVHALCKKGFVLESERLFDKVLKRGVCPNLFTFNIFIQGLCKEGSLDRAVRLL 353
Query: 89 VDMHRKGHQPE 99
+ R+G +P+
Sbjct: 354 GCVSREGLRPD 364
>gi|297817834|ref|XP_002876800.1| hypothetical protein ARALYDRAFT_484139 [Arabidopsis lyrata subsp.
lyrata]
gi|297322638|gb|EFH53059.1| hypothetical protein ARALYDRAFT_484139 [Arabidopsis lyrata subsp.
lyrata]
Length = 1010
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/127 (28%), Positives = 60/127 (47%), Gaps = 6/127 (4%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYD---KYDVVLLNSMLCAYCRTGDMESVMHVMRKLD 57
MI F + G ++T FE D + DV+ N+++ +C+ G + + R++
Sbjct: 136 MIDGFGKVGRLDDTVCF---FEEMKDMCCEPDVITYNALINCFCKFGKLPKGLEFFREMK 192
Query: 58 ELAISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHS 117
+ P+ ++ L+ FCKE M A + VDM R G P E +SLI K+ S
Sbjct: 193 RNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDAYCKIGNLS 252
Query: 118 EALSVYN 124
+A + N
Sbjct: 253 DAFRLAN 259
Score = 42.4 bits (98), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 30/127 (23%), Positives = 54/127 (42%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
MI C+ G E + L + + + D V NSM+ + + G ++ + ++ ++
Sbjct: 101 MIDCMCKEGDVEAARGLFEEMKFRGLIPDTVTYNSMIDGFGKVGRLDDTVCFFEEMKDMC 160
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
PD T++ LI FCK +M R G +P S+L+ K +A+
Sbjct: 161 CEPDVITYNALINCFCKFGKLPKGLEFFREMKRNGLKPNVVSYSTLVDAFCKEGMMQQAI 220
Query: 121 SVYNMLR 127
Y +R
Sbjct: 221 KFYVDMR 227
Score = 35.4 bits (80), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 20/80 (25%), Positives = 40/80 (50%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I A+C+ G + +LA + +++VV +++ C + +H++ ++ EL
Sbjct: 241 LIDAYCKIGNLSDAFRLANEMLQVGVEWNVVTYTALIDGLCGWENPTEGLHLLDEMVELD 300
Query: 61 ISPDYNTFHILIKYFCKEKM 80
I TF +LI CK K+
Sbjct: 301 IKVTVVTFCVLIDGLCKNKL 320
>gi|449520323|ref|XP_004167183.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
mitochondrial-like [Cucumis sativus]
Length = 605
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/106 (24%), Positives = 52/106 (49%)
Query: 2 ISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAI 61
++ C++GC E +L ++ K D+ N ++ C+ G +E+ + KL + +
Sbjct: 459 LNGLCKNGCLFEAMELFNKLKSYNIKLDIECFNCLIDGLCKAGKLETAWELFEKLPQEEL 518
Query: 62 SPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLI 107
PD T++I+I FC+ + A M + G P++ ++LI
Sbjct: 519 QPDVVTYNIMIHEFCRGGQVVKANILFQKMEKNGCTPDKITYATLI 564
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 71/155 (45%), Gaps = 2/155 (1%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I FC G +EE K+L + + + +VV N ++ C+ G + ++ + +
Sbjct: 283 LIHGFCCGGKWEEAKRLFNEMVNQGVQPNVVTFNVLIDVLCKEGKVIEAKDLLEVMIQRG 342
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
I P+ T++ LI+ FC A V M KG +P+ + LI K EA+
Sbjct: 343 IVPNLLTYNSLIEGFCLVGDLNSARELFVSMPSKGCEPDVICYTVLINGYCKTSKVEEAM 402
Query: 121 SVYN-MLRYSKRSMCKALHEKILHILISGKLLKDA 154
+YN ML+ KR K + +L L G + DA
Sbjct: 403 KLYNGMLQVGKRPDVKT-YGALLTGLFQGGKVGDA 436
Score = 39.3 bits (90), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 21/79 (26%), Positives = 39/79 (49%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C++G E +L + + DVV N M+ +CR G + + +K+++
Sbjct: 493 LIDGLCKAGKLETAWELFEKLPQEELQPDVVTYNIMIHEFCRGGQVVKANILFQKMEKNG 552
Query: 61 ISPDYNTFHILIKYFCKEK 79
+PD T+ LI+ F + K
Sbjct: 553 CTPDKITYATLIRGFFESK 571
Score = 37.7 bits (86), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 25/127 (19%), Positives = 54/127 (42%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C+ G E K L + +++ NS++ +C GD+ S + +
Sbjct: 318 LIDVLCKEGKVIEAKDLLEVMIQRGIVPNLLTYNSLIEGFCLVGDLNSARELFVSMPSKG 377
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
PD + +LI +CK A + M + G +P+ + +L+ L + +A
Sbjct: 378 CEPDVICYTVLINGYCKTSKVEEAMKLYNGMLQVGKRPDVKTYGALLTGLFQGGKVGDAK 437
Query: 121 SVYNMLR 127
++ +++
Sbjct: 438 KLFGVMK 444
>gi|357499781|ref|XP_003620179.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355495194|gb|AES76397.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 517
Score = 53.9 bits (128), Expect = 2e-05, Method: Composition-based stats.
Identities = 37/124 (29%), Positives = 56/124 (45%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ FC+ G +E K + + K VV NS++ Y + + + +L
Sbjct: 183 LVDGFCKEGRVKEAKNVLAMMMIQGIKPGVVTYNSLMDGYFLVKQVNKAKSIFNTMAQLG 242
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+SPD ++ ILI FCK KM A + +MH K P SSLI L K S AL
Sbjct: 243 VSPDIQSYSILINGFCKIKMMDEAMELLKEMHHKQIIPNVVTYSSLIDGLCKSGKISYAL 302
Query: 121 SVYN 124
+ +
Sbjct: 303 KLVD 306
Score = 43.1 bits (100), Expect = 0.036, Method: Composition-based stats.
Identities = 23/96 (23%), Positives = 46/96 (47%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C+SG +L + + ++V +S+L A C+ +++ + ++ ++
Sbjct: 288 LIDGLCKSGKISYALKLVDEMHDRGQPPNIVTYSSILDALCKNHQVDNAIALLTQMKNQG 347
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGH 96
I P+ T+ ILIK C+ A + D+ KGH
Sbjct: 348 IQPNMYTYTILIKGLCQSGKLEDARKVFEDLLVKGH 383
Score = 38.1 bits (87), Expect = 1.3, Method: Composition-based stats.
Identities = 19/91 (20%), Positives = 43/91 (47%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C+SG E+ +++ D K +V M+ +C G + + ++ K+++
Sbjct: 358 LIKGLCQSGKLEDARKVFEDLLVKGHNLNVYTYTVMIQGFCDKGLFDEALTLLSKMEDNG 417
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDM 91
P+ T+ I+I K+ +A + + +M
Sbjct: 418 CIPNAKTYEIIILSLFKKDENEMAEKLLCEM 448
Score = 37.7 bits (86), Expect = 1.7, Method: Composition-based stats.
Identities = 20/98 (20%), Positives = 45/98 (45%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ FC+ +E +L + K +VV +S++ C++G + + ++ ++ +
Sbjct: 253 LINGFCKIKMMDEAMELLKEMHHKQIIPNVVTYSSLIDGLCKSGKISYALKLVDEMHDRG 312
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQP 98
P+ T+ ++ CK A + M +G QP
Sbjct: 313 QPPNIVTYSSILDALCKNHQVDNAIALLTQMKNQGIQP 350
Score = 36.6 bits (83), Expect = 3.9, Method: Composition-based stats.
Identities = 32/136 (23%), Positives = 61/136 (44%), Gaps = 10/136 (7%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSM---LC-------AYCRTGDMESVM 50
+I++FC+ G + K + + LN++ LC +C G ++ +
Sbjct: 103 LINSFCQLGHIPSAFSVLTKILKMGYKPNTITLNTLIKGLCLNGKIHDKHCIVGKLKDAV 162
Query: 51 HVMRKLDELAISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHL 110
+ K+ I+PD TF IL+ FCKE A + M +G +P +SL+
Sbjct: 163 DLFNKMILENINPDVYTFTILVDGFCKEGRVKEAKNVLAMMMIQGIKPGVVTYNSLMDGY 222
Query: 111 GKMRAHSEALSVYNML 126
++ ++A S++N +
Sbjct: 223 FLVKQVNKAKSIFNTM 238
>gi|326522248|dbj|BAK07586.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 548
Score = 53.9 bits (128), Expect = 2e-05, Method: Composition-based stats.
Identities = 27/107 (25%), Positives = 53/107 (49%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++SA+C + ++L D A DV + ++ YCRTG ++ +M +++
Sbjct: 246 VLSAYCAKEDLKGAQKLFDDIIAGGRVPDVTMYTVLIDGYCRTGKIQDAARIMDEMEAAG 305
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLI 107
+ P+ T+ ++I+ CKE A M +M GH P+ L + ++
Sbjct: 306 VQPNEVTYSVVIEACCKEGKSAEACNLMREMLGAGHTPDTPLAAKVV 352
Score = 45.4 bits (106), Expect = 0.009, Method: Composition-based stats.
Identities = 29/107 (27%), Positives = 47/107 (43%), Gaps = 1/107 (0%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C+SG E ++L + E Y K ++ NS++ C G+++ V + E
Sbjct: 386 LIYWLCKSGMVREARKLFDELEKGY-KPSLLTYNSLISGLCENGELQEAGKVWDDMVERR 444
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLI 107
P+ T+ LIK FCK +M KG P + L L+
Sbjct: 445 YEPNAMTYEALIKGFCKIGKPDEGAAVFTEMVTKGCAPSKVLYQVLV 491
Score = 40.4 bits (93), Expect = 0.26, Method: Composition-based stats.
Identities = 28/99 (28%), Positives = 43/99 (43%), Gaps = 3/99 (3%)
Query: 29 DVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYMLAYRTM 88
DVV ++L AYC D++ + + PD + +LI +C+ A R M
Sbjct: 239 DVVTYTTVLSAYCAKEDLKGAQKLFDDIIAGGRVPDVTMYTVLIDGYCRTGKIQDAARIM 298
Query: 89 VDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVYNMLR 127
+M G QP E S +I K +EA N++R
Sbjct: 299 DEMEAAGVQPNEVTYSVVIEACCKEGKSAEAC---NLMR 334
Score = 39.7 bits (91), Expect = 0.38, Method: Composition-based stats.
Identities = 26/126 (20%), Positives = 60/126 (47%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I +CR+G ++ ++ + EA + + V + ++ A C+ G ++MR++
Sbjct: 281 LIDGYCRTGKIQDAARIMDEMEAAGVQPNEVTYSVVIEACCKEGKSAEACNLMREMLGAG 340
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+PD ++ C++ A++ M +K P+ + ++LI+ L K EA
Sbjct: 341 HTPDTPLAAKVVDVMCQDGKAEEAHQMWRWMVKKNVPPDNTITNTLIYWLCKSGMVREAR 400
Query: 121 SVYNML 126
+++ L
Sbjct: 401 KLFDEL 406
>gi|115458614|ref|NP_001052907.1| Os04g0446100 [Oryza sativa Japonica Group]
gi|38344550|emb|CAD40961.2| OSJNBa0027P08.18 [Oryza sativa Japonica Group]
gi|113564478|dbj|BAF14821.1| Os04g0446100 [Oryza sativa Japonica Group]
Length = 583
Score = 53.9 bits (128), Expect = 2e-05, Method: Composition-based stats.
Identities = 36/126 (28%), Positives = 57/126 (45%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+IS +C++G E+ + D A + V N ++ Y + GD+ S + V +++ L
Sbjct: 328 VISGYCKAGKLEDAMAVYNDMVASGIMPNTVTYNVLINGYGKVGDLGSAVEVYQQMTRLR 387
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
PD TF LI +C+ A R DM + QP S +I L K EA+
Sbjct: 388 CPPDVVTFSSLIDGYCRCGQLDDALRIWSDMAQHRIQPNVYTFSIIIHSLCKQNRSDEAI 447
Query: 121 SVYNML 126
+ N L
Sbjct: 448 GLLNEL 453
Score = 40.4 bits (93), Expect = 0.22, Method: Composition-based stats.
Identities = 24/97 (24%), Positives = 45/97 (46%), Gaps = 1/97 (1%)
Query: 29 DVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYMLAYRTM 88
DV N ++ CR G ++ + ++ +++E SPD T +IL+ C+ + +
Sbjct: 250 DVWSFNVVIKGVCRVGQVQKALELVERMNEFGCSPDTVTHNILVDGLCRTNEVSRGHEVL 309
Query: 89 VDMHRKG-HQPEEELCSSLIFHLGKMRAHSEALSVYN 124
+ R G P +S+I K +A++VYN
Sbjct: 310 RRLQRDGVCMPNVVTFTSVISGYCKAGKLEDAMAVYN 346
Score = 36.2 bits (82), Expect = 5.1, Method: Composition-based stats.
Identities = 32/127 (25%), Positives = 50/127 (39%), Gaps = 1/127 (0%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I CR G ++ +L D V N ++ CRT ++ V+R+L
Sbjct: 257 VIKGVCRVGQVQKALELVERMNEFGCSPDTVTHNILVDGLCRTNEVSRGHEVLRRLQRDG 316
Query: 61 IS-PDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEA 119
+ P+ TF +I +CK A DM G P + LI GK+ A
Sbjct: 317 VCMPNVVTFTSVISGYCKAGKLEDAMAVYNDMVASGIMPNTVTYNVLINGYGKVGDLGSA 376
Query: 120 LSVYNML 126
+ VY +
Sbjct: 377 VEVYQQM 383
>gi|356529503|ref|XP_003533330.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Glycine max]
Length = 546
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/107 (28%), Positives = 52/107 (48%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ A C+ G +E K + K DV+ ++++ Y +++ HV + +
Sbjct: 275 LVDALCKEGKVKEAKSVLAVMLKACVKPDVITYSTLMDGYFLVYEVKKAQHVFNAMSLMG 334
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLI 107
++PD +T+ ILI FCK KM A +MH+K P SSLI
Sbjct: 335 VTPDVHTYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLI 381
Score = 43.5 bits (101), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 23/96 (23%), Positives = 42/96 (43%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C+SG L + + DV+ +S++ C+ G ++ + + K+ +
Sbjct: 380 LIDGLCKSGRIPYVWDLIDEMRDRGQPADVITYSSLIDGLCKNGHLDRAIALFNKMKDQE 439
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGH 96
I P+ TF IL+ CK A D+ KG+
Sbjct: 440 IRPNIFTFTILLDGLCKGGRLKDAQEVFQDLLTKGY 475
Score = 40.0 bits (92), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 28/127 (22%), Positives = 55/127 (43%), Gaps = 6/127 (4%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C G ++ A+ + + V +++ C+ GD + ++RK+D
Sbjct: 135 LIKGLCLKGQVKKALHFHDKLLAQGFQLNQVSYATLINGVCKIGDTRGAIKLLRKIDGRL 194
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHL---GKMRAHS 117
P+ + +I CK ++ AY +M KG + S+LI+ GK++
Sbjct: 195 TKPNVEMYSTIIDALCKYQLVSEAYGLFSEMTVKGISADVVTYSTLIYGFCIEGKLK--- 251
Query: 118 EALSVYN 124
EA+ + N
Sbjct: 252 EAIGLLN 258
Score = 38.5 bits (88), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 19/78 (24%), Positives = 39/78 (50%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I A C+ E L + K DVV ++++ +C G ++ + ++ ++
Sbjct: 205 IIDALCKYQLVSEAYGLFSEMTVKGISADVVTYSTLIYGFCIEGKLKEAIGLLNEMVLKT 264
Query: 61 ISPDYNTFHILIKYFCKE 78
I+P+ T++IL+ CKE
Sbjct: 265 INPNVYTYNILVDALCKE 282
Score = 35.8 bits (81), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 16/78 (20%), Positives = 37/78 (47%)
Query: 30 VVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYMLAYRTMV 89
++ N +L ++ + + + + +L+ I PD T +ILI FC + +
Sbjct: 59 IIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLITLNILINCFCHMGQITFGFSVLA 118
Query: 90 DMHRKGHQPEEELCSSLI 107
+ ++G+ P+ ++LI
Sbjct: 119 KILKRGYPPDTVTLNTLI 136
>gi|224145829|ref|XP_002325779.1| predicted protein [Populus trichocarpa]
gi|222862654|gb|EEF00161.1| predicted protein [Populus trichocarpa]
Length = 586
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/124 (25%), Positives = 58/124 (46%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ C++G F + +L D A+ + DV +++ C+ G+ + +++K+ E+
Sbjct: 167 LINGLCKAGEFAQALELFDDMVARGCQPDVYTYTTIINGLCKMGETAAAAGLIKKMGEVG 226
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
PD T+ LI CK+++ A M KG P +SLI L EA
Sbjct: 227 CQPDVVTYSTLIDSLCKDRLVNEALDIFSYMKAKGISPTVVSYTSLIQGLCSFSRWKEAS 286
Query: 121 SVYN 124
++ N
Sbjct: 287 AMLN 290
Score = 43.9 bits (102), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 29/123 (23%), Positives = 54/123 (43%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I AFC+ G E ++L D D+ + +L +C+ G + + R +
Sbjct: 412 LIHAFCQLGKLREARELFKDMHTNGYLPDLCTYSVLLEGFCKQGYLGKAFRLFRAMQGTY 471
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ P+ + ILI CK A + ++ G QP+ ++ +++I L K EAL
Sbjct: 472 LKPNLVMYTILIDSMCKSGNLNHARKLFSELFVHGLQPDVQIYTTIINGLCKEGLLDEAL 531
Query: 121 SVY 123
+
Sbjct: 532 EAF 534
Score = 40.0 bits (92), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 21/100 (21%), Positives = 43/100 (43%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ FC+ G + +L + Y K ++V+ ++ + C++G++ + +L
Sbjct: 447 LLEGFCKQGYLGKAFRLFRAMQGTYLKPNLVMYTILIDSMCKSGNLNHARKLFSELFVHG 506
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEE 100
+ PD + +I CKE + A M G P E
Sbjct: 507 LQPDVQIYTTIINGLCKEGLLDEALEAFRKMEEDGCPPNE 546
Score = 39.7 bits (91), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 25/99 (25%), Positives = 41/99 (41%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I + C+ E + +AK VV S++ C + ++ ++ L
Sbjct: 237 LIDSLCKDRLVNEALDIFSYMKAKGISPTVVSYTSLIQGLCSFSRWKEASAMLNEMTSLN 296
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPE 99
I PD TF +LI FCKE + A + M G +P
Sbjct: 297 IMPDIVTFSLLIDIFCKEGNVLEAQGVLKTMTEMGVEPN 335
Score = 38.9 bits (89), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 27/125 (21%), Positives = 52/125 (41%)
Query: 30 VVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYMLAYRTMV 89
++ +++ C+ G+ + + + PD T+ +I CK A +
Sbjct: 161 IITFTTLINGLCKAGEFAQALELFDDMVARGCQPDVYTYTTIINGLCKMGETAAAAGLIK 220
Query: 90 DMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVYNMLRYSKRSMCKALHEKILHILISGK 149
M G QP+ S+LI L K R +EAL +++ ++ S + ++ L S
Sbjct: 221 KMGEVGCQPDVVTYSTLIDSLCKDRLVNEALDIFSYMKAKGISPTVVSYTSLIQGLCSFS 280
Query: 150 LLKDA 154
K+A
Sbjct: 281 RWKEA 285
Score = 37.0 bits (84), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 40/87 (45%)
Query: 33 LNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYMLAYRTMVDMH 92
LN ++ +C ++ V+ K+ +L + P TF LI CK + A DM
Sbjct: 129 LNILINCFCLMQHVDLGFSVLAKVIKLGLQPTIITFTTLINGLCKAGEFAQALELFDDMV 188
Query: 93 RKGHQPEEELCSSLIFHLGKMRAHSEA 119
+G QP+ +++I L KM + A
Sbjct: 189 ARGCQPDVYTYTTIINGLCKMGETAAA 215
Score = 36.2 bits (82), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 21/99 (21%), Positives = 44/99 (44%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ +C +E KQL + + + V +++ A+C+ G + + + +
Sbjct: 377 LINGYCMVKRIDEAKQLFNEMIHQGLTPNTVSYTTLIHAFCQLGKLREARELFKDMHTNG 436
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPE 99
PD T+ +L++ FCK+ A+R M +P
Sbjct: 437 YLPDLCTYSVLLEGFCKQGYLGKAFRLFRAMQGTYLKPN 475
>gi|356549285|ref|XP_003543024.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g46100-like [Glycine max]
Length = 479
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/154 (24%), Positives = 70/154 (45%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ CR G E K+L + E K VV S++ C++ +++ + ++ ++
Sbjct: 197 LINGLCRLGNISEAKELFKEMEQKGFSASVVTYTSLIHGLCQSNNLDEAIGLLEEMKRND 256
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
I P+ T+ L+ CK A + + M +K H P S+LI L K R EA+
Sbjct: 257 IEPNVFTYSSLMDGLCKGGHSSQAMQLLEVMDKKHHLPNMVTYSTLINGLCKERKLREAV 316
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLKDA 154
+ + +R L+ KI+ L + ++A
Sbjct: 317 EILDRMRIQGLKPNAGLYGKIISGLCAAGSYQEA 350
Score = 37.4 bits (85), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 28/102 (27%), Positives = 46/102 (45%), Gaps = 1/102 (0%)
Query: 54 RKLDELAISPDYNTFHILIKYFCKEKMYM-LAYRTMVDMHRKGHQPEEELCSSLIFHLGK 112
R++ EL I + +ILIK CK K + A R +M +G QP+ +LI L +
Sbjct: 144 REMRELGIPSSVVSLNILIKALCKNKETVDSALRIFQEMPNRGCQPDSYTYGTLINGLCR 203
Query: 113 MRAHSEALSVYNMLRYSKRSMCKALHEKILHILISGKLLKDA 154
+ SEA ++ + S + ++H L L +A
Sbjct: 204 LGNISEAKELFKEMEQKGFSASVVTYTSLIHGLCQSNNLDEA 245
>gi|449462477|ref|XP_004148967.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
mitochondrial-like [Cucumis sativus]
Length = 597
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/106 (24%), Positives = 52/106 (49%)
Query: 2 ISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAI 61
++ C++GC E +L ++ K D+ N ++ C+ G +E+ + KL + +
Sbjct: 451 LNGLCKNGCLFEAMELFNKLKSYNIKLDIECFNCLIDGLCKAGKLETAWELFEKLPQEEL 510
Query: 62 SPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLI 107
PD T++I+I FC+ + A M + G P++ ++LI
Sbjct: 511 QPDVVTYNIMIHEFCRGGQVVKANILFQKMEKNGCTPDKITYATLI 556
Score = 45.8 bits (107), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 66/145 (45%), Gaps = 2/145 (1%)
Query: 11 FEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHI 70
+EE K+L + + + +VV N ++ C+ G + ++ + + I P+ T++
Sbjct: 285 WEEAKRLFNEMVNQGVQPNVVTFNVLIDVLCKEGKVIEAKDLLEVMIQRGIVPNLLTYNS 344
Query: 71 LIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVYN-MLRYS 129
LI+ FC A V M KG +P+ + LI K EA+ +YN ML+
Sbjct: 345 LIEGFCLVGDLNSARELFVSMPSKGCEPDVICYTVLINGYCKTSKVEEAMKLYNGMLQVG 404
Query: 130 KRSMCKALHEKILHILISGKLLKDA 154
KR K + +L L G + DA
Sbjct: 405 KRPDVKT-YGALLTGLFQGGKVGDA 428
Score = 39.3 bits (90), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 21/79 (26%), Positives = 39/79 (49%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C++G E +L + + DVV N M+ +CR G + + +K+++
Sbjct: 485 LIDGLCKAGKLETAWELFEKLPQEELQPDVVTYNIMIHEFCRGGQVVKANILFQKMEKNG 544
Query: 61 ISPDYNTFHILIKYFCKEK 79
+PD T+ LI+ F + K
Sbjct: 545 CTPDKITYATLIRGFFESK 563
Score = 37.7 bits (86), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 25/127 (19%), Positives = 54/127 (42%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C+ G E K L + +++ NS++ +C GD+ S + +
Sbjct: 310 LIDVLCKEGKVIEAKDLLEVMIQRGIVPNLLTYNSLIEGFCLVGDLNSARELFVSMPSKG 369
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
PD + +LI +CK A + M + G +P+ + +L+ L + +A
Sbjct: 370 CEPDVICYTVLINGYCKTSKVEEAMKLYNGMLQVGKRPDVKTYGALLTGLFQGGKVGDAK 429
Query: 121 SVYNMLR 127
++ +++
Sbjct: 430 KLFGVMK 436
>gi|449440401|ref|XP_004137973.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g32630-like [Cucumis sativus]
Length = 606
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/98 (25%), Positives = 48/98 (48%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ +C+ G +E +L + K + D N + +CR+ E ++ ++E
Sbjct: 373 LMDGYCKKGMIDEALRLQNIMQQKGFEIDAFTCNIIASGFCRSNRREEAKRLLLTMEERG 432
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQP 98
++P+ +F ILI +CKE+ + A R M +KG P
Sbjct: 433 VAPNVVSFSILIDIYCKEQNFAEARRLFKVMEKKGKAP 470
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/105 (25%), Positives = 52/105 (49%)
Query: 3 SAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAIS 62
S FCRS EE K+L E + +VV + ++ YC+ + + + +++ +
Sbjct: 410 SGFCRSNRREEAKRLLLTMEERGVAPNVVSFSILIDIYCKEQNFAEARRLFKVMEKKGKA 469
Query: 63 PDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLI 107
P T++ I+ +CK+ AY+ + +M +G P+ +SLI
Sbjct: 470 PSVVTYNAFIERYCKKGKMEEAYKLINEMQERGLMPDTYTYTSLI 514
Score = 43.5 bits (101), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 26/126 (20%), Positives = 59/126 (46%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ C++G + + + D ++K + V+ N+++ YC+ G ++ + + + +
Sbjct: 338 LINGACKAGEMKAAEMMVNDMQSKGVDVNRVIFNTLMDGYCKKGMIDEALRLQNIMQQKG 397
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
D T +I+ FC+ A R ++ M +G P S LI K + +EA
Sbjct: 398 FEIDAFTCNIIASGFCRSNRREEAKRLLLTMEERGVAPNVVSFSILIDIYCKEQNFAEAR 457
Query: 121 SVYNML 126
++ ++
Sbjct: 458 RLFKVM 463
Score = 40.4 bits (93), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 23/112 (20%), Positives = 57/112 (50%)
Query: 2 ISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAI 61
I +C+ G EE +L + + + D S++ +G+++ + + ++ +L +
Sbjct: 479 IERYCKKGKMEEAYKLINEMQERGLMPDTYTYTSLIDGERASGNVDRALELFNEMPQLGL 538
Query: 62 SPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKM 113
+ + T+ ++I K+ A++ +M+++G P++ + SSLI L K+
Sbjct: 539 NRNVVTYTVIISGLSKDGRADEAFKLYDEMNKEGIVPDDGIYSSLIASLHKV 590
Score = 39.7 bits (91), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 35/72 (48%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I +C+ F E ++L E K VV N+ + YC+ G ME ++ ++ E
Sbjct: 443 LIDIYCKEQNFAEARRLFKVMEKKGKAPSVVTYNAFIERYCKKGKMEEAYKLINEMQERG 502
Query: 61 ISPDYNTFHILI 72
+ PD T+ LI
Sbjct: 503 LMPDTYTYTSLI 514
Score = 39.7 bits (91), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 31/127 (24%), Positives = 58/127 (45%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I + RS EE ++L + K + DV + S++ C+ G+M+ + ++ E
Sbjct: 268 LIEWYSRSSKIEEAEKLFDEMLKKGIEPDVYIYTSIINWNCKFGNMKRAFVLFDEMTERR 327
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ P+ T+ LI CK A + DM KG + ++L+ K EAL
Sbjct: 328 LVPNAYTYGALINGACKAGEMKAAEMMVNDMQSKGVDVNRVIFNTLMDGYCKKGMIDEAL 387
Query: 121 SVYNMLR 127
+ N+++
Sbjct: 388 RLQNIMQ 394
Score = 38.5 bits (88), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 22/107 (20%), Positives = 51/107 (47%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ C+ G K L + K K V+ N++L Y D+ V ++ +++
Sbjct: 198 VVDGLCKKGEVVRAKALMDELVCKGFKPSVITYNTLLNGYIEIKDVGGVNEILSLMEKNV 257
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLI 107
+ + T+ +LI+++ + A + +M +KG +P+ + +S+I
Sbjct: 258 VDYNVTTYTMLIEWYSRSSKIEEAEKLFDEMLKKGIEPDVYIYTSII 304
>gi|255577348|ref|XP_002529554.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223530966|gb|EEF32823.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 678
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/99 (27%), Positives = 50/99 (50%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C SG ++ K+L D +D + S+L CR G ++ H + +L +
Sbjct: 564 IIDGLCESGLIDKAKKLWDDVIWPSRIHDDFVYASILKGLCRAGKLDEACHFLYELVDSG 623
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPE 99
+SP+ +++I+I CK M AY+ + +M + G P+
Sbjct: 624 VSPNIISYNIVIDSACKLGMKREAYQVVTEMRKNGLTPD 662
Score = 35.4 bits (80), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 21/100 (21%), Positives = 42/100 (42%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I + CR G + ++A D M+ + CR G ++ + +
Sbjct: 282 VIDSLCREGFLNDVFKIAEDMPQGKSVNQEFAYAHMIDSLCRAGKNHGASRIVYMMKKKG 341
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEE 100
++P +++ +I CKE+ M AY+ + G+ P E
Sbjct: 342 LTPSLVSYNSIIHGLCKERGCMRAYQLFEEGIEFGYLPSE 381
>gi|359497434|ref|XP_003635514.1| PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
mitochondrial-like [Vitis vinifera]
Length = 347
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/127 (26%), Positives = 61/127 (48%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I AF R G +E +L D + D + N ++ A CR G++E + + +
Sbjct: 160 LIHAFLRRGAMQEALKLVNDMLFRGCPLDDITYNGLIKALCRAGNIEKGLALFEDMMSKG 219
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
++P+ + +ILI C+ A + DM +G P+ +SLI L K EAL
Sbjct: 220 LNPNNISCNILINGLCRTGNIQHALEFLRDMIHRGLTPDIVTYNSLINGLCKTGRAQEAL 279
Query: 121 SVYNMLR 127
++++ L+
Sbjct: 280 NLFDKLQ 286
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 48/100 (48%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ CR+G + + D + D+V NS++ C+TG + +++ KL
Sbjct: 230 LINGLCRTGNIQHALEFLRDMIHRGLTPDIVTYNSLINGLCKTGRAQEALNLFDKLQVEG 289
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEE 100
I PD T++ LI + CKE M+ A+ + G P E
Sbjct: 290 ICPDAITYNTLISWHCKEGMFDDAHLLLSRGVDSGFIPNE 329
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/123 (24%), Positives = 60/123 (48%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C+ G ++L + + K + +V+ ++ +C+ G +E +V+ ++
Sbjct: 20 LILGLCKKGYLVSARELMNEMQIKGCEPNVITYTILIDRFCKEGRLEEARNVLDEMSGKG 79
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
++ + ++ LI CK++ A DM KG +P+ +SLIF L K+ EAL
Sbjct: 80 LALNAVGYNCLISALCKDEKVQDALNMFGDMSSKGCKPDIFTFNSLIFGLCKVNKFEEAL 139
Query: 121 SVY 123
+Y
Sbjct: 140 GLY 142
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/107 (25%), Positives = 50/107 (46%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I A CR+G E+ L D +K + + N ++ CRTG+++ + +R +
Sbjct: 195 LIKALCRAGNIEKGLALFEDMMSKGLNPNNISCNILINGLCRTGNIQHALEFLRDMIHRG 254
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLI 107
++PD T++ LI CK A + +G P+ ++LI
Sbjct: 255 LTPDIVTYNSLINGLCKTGRAQEALNLFDKLQVEGICPDAITYNTLI 301
Score = 42.4 bits (98), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 30/124 (24%), Positives = 52/124 (41%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I FC+ G EE + + + K + V N ++ A C+ ++ +++ +
Sbjct: 55 LIDRFCKEGRLEEARNVLDEMSGKGLALNAVGYNCLISALCKDEKVQDALNMFGDMSSKG 114
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
PD TF+ LI CK + A DM +G ++LI + A EAL
Sbjct: 115 CKPDIFTFNSLIFGLCKVNKFEEALGLYQDMLLEGVIANTITYNTLIHAFLRRGAMQEAL 174
Query: 121 SVYN 124
+ N
Sbjct: 175 KLVN 178
Score = 38.9 bits (89), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 33/150 (22%), Positives = 67/150 (44%), Gaps = 8/150 (5%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+ISA C+ ++ + GD +K K D+ NS++ C+ E + + + +
Sbjct: 90 LISALCKDEKVQDALNMFGDMSSKGCKPDIFTFNSLIFGLCKVNKFEEALGLYQDMLLEG 149
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ + T++ LI F + A + + DM +G ++ I + G ++A A
Sbjct: 150 VIANTITYNTLIHAFLRRGAMQEALKLVNDMLFRGCPLDD------ITYNGLIKALCRAG 203
Query: 121 SVYNMLRYSKRSMCKALHEKIL--HILISG 148
++ L + M K L+ + +ILI+G
Sbjct: 204 NIEKGLALFEDMMSKGLNPNNISCNILING 233
>gi|326517954|dbj|BAK07229.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 549
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/150 (23%), Positives = 69/150 (46%), Gaps = 8/150 (5%)
Query: 9 GCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTF 68
G F+E + E+ + N+++ +C+ M +M++++E P T+
Sbjct: 251 GAFQELRGSVPPDESSF--------NTLVHGWCKARMMNEARDMMKEMEEHGFKPSVITY 302
Query: 69 HILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVYNMLRY 128
LI+ +C EK + Y + +M KG P + ++ LGK EAL +++ +R
Sbjct: 303 TSLIEAYCMEKDFQTVYAILNEMRSKGCPPNVITYTIVMHALGKAGRTQEALDIFDKVRG 362
Query: 129 SKRSMCKALHEKILHILISGKLLKDAYIVV 158
+ + + +++IL L+DA VV
Sbjct: 363 DGCAPDASFYNSLIYILGRAGRLEDANSVV 392
Score = 42.0 bits (97), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 27/129 (20%), Positives = 57/129 (44%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ +C++ E + + + E K V+ S++ AYC D ++V ++ ++
Sbjct: 270 LVHGWCKARMMNEARDMMKEMEEHGFKPSVITYTSLIEAYCMEKDFQTVYAILNEMRSKG 329
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
P+ T+ I++ K A + G P+ +SLI+ LG+ +A
Sbjct: 330 CPPNVITYTIVMHALGKAGRTQEALDIFDKVRGDGCAPDASFYNSLIYILGRAGRLEDAN 389
Query: 121 SVYNMLRYS 129
SV + +R +
Sbjct: 390 SVVDKMRMT 398
Score = 37.0 bits (84), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 21/93 (22%), Positives = 41/93 (44%)
Query: 7 RSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYN 66
R+G E+ + + V N+++ A C E+ + ++ K++E + PD
Sbjct: 381 RAGRLEDANSVVDKMRMTGVRPTVATFNTLISAACDHSQAENALKMLVKMEEQSCKPDIK 440
Query: 67 TFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPE 99
T+ L+K CK + + + M RK P+
Sbjct: 441 TYTPLLKLCCKRQWIKVLRFLICHMFRKDITPD 473
>gi|449531231|ref|XP_004172591.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g32630-like, partial [Cucumis sativus]
Length = 602
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/98 (25%), Positives = 48/98 (48%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ +C+ G +E +L + K + D N + +CR+ E ++ ++E
Sbjct: 369 LMDGYCKKGMIDEALRLQNIMQQKGFEIDAFTCNIIASGFCRSNRREEAKRLLLTMEERG 428
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQP 98
++P+ +F ILI +CKE+ + A R M +KG P
Sbjct: 429 VAPNVVSFSILIDIYCKEQNFAEARRLFKVMEKKGKAP 466
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/105 (25%), Positives = 52/105 (49%)
Query: 3 SAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAIS 62
S FCRS EE K+L E + +VV + ++ YC+ + + + +++ +
Sbjct: 406 SGFCRSNRREEAKRLLLTMEERGVAPNVVSFSILIDIYCKEQNFAEARRLFKVMEKKGKA 465
Query: 63 PDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLI 107
P T++ I+ +CK+ AY+ + +M +G P+ +SLI
Sbjct: 466 PSVVTYNAFIERYCKKGKMEEAYKLINEMQERGLMPDTYTYTSLI 510
Score = 43.5 bits (101), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 26/126 (20%), Positives = 59/126 (46%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ C++G + + + D ++K + V+ N+++ YC+ G ++ + + + +
Sbjct: 334 LINGACKAGEMKAAEMMVNDMQSKGVDVNRVIFNTLMDGYCKKGMIDEALRLQNIMQQKG 393
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
D T +I+ FC+ A R ++ M +G P S LI K + +EA
Sbjct: 394 FEIDAFTCNIIASGFCRSNRREEAKRLLLTMEERGVAPNVVSFSILIDIYCKEQNFAEAR 453
Query: 121 SVYNML 126
++ ++
Sbjct: 454 RLFKVM 459
Score = 40.4 bits (93), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 23/112 (20%), Positives = 57/112 (50%)
Query: 2 ISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAI 61
I +C+ G EE +L + + + D S++ +G+++ + + ++ +L +
Sbjct: 475 IERYCKKGKMEEAYKLINEMQERGLMPDTYTYTSLIDGERASGNVDRALELFNEMPQLGL 534
Query: 62 SPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKM 113
+ + T+ ++I K+ A++ +M+++G P++ + SSLI L K+
Sbjct: 535 NRNVVTYTVIISGLSKDGRADEAFKLYDEMNKEGIVPDDGIYSSLIASLHKV 586
Score = 39.7 bits (91), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 35/72 (48%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I +C+ F E ++L E K VV N+ + YC+ G ME ++ ++ E
Sbjct: 439 LIDIYCKEQNFAEARRLFKVMEKKGKAPSVVTYNAFIERYCKKGKMEEAYKLINEMQERG 498
Query: 61 ISPDYNTFHILI 72
+ PD T+ LI
Sbjct: 499 LMPDTYTYTSLI 510
Score = 39.7 bits (91), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 31/127 (24%), Positives = 58/127 (45%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I + RS EE ++L + K + DV + S++ C+ G+M+ + ++ E
Sbjct: 264 LIEWYSRSSKIEEAEKLFDEMLKKGIEPDVYIYTSIINWNCKFGNMKRAFVLFDEMTERR 323
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ P+ T+ LI CK A + DM KG + ++L+ K EAL
Sbjct: 324 LVPNAYTYGALINGACKAGEMKAAEMMVNDMQSKGVDVNRVIFNTLMDGYCKKGMIDEAL 383
Query: 121 SVYNMLR 127
+ N+++
Sbjct: 384 RLQNIMQ 390
Score = 38.5 bits (88), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 22/107 (20%), Positives = 51/107 (47%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ C+ G K L + K K V+ N++L Y D+ V ++ +++
Sbjct: 194 VVDGLCKKGEVVRAKALMDELVCKGFKPSVITYNTLLNGYIEIKDVGGVNEILSLMEKNV 253
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLI 107
+ + T+ +LI+++ + A + +M +KG +P+ + +S+I
Sbjct: 254 VDYNVTTYTMLIEWYSRSSKIEEAEKLFDEMLKKGIEPDVYIYTSII 300
>gi|297839331|ref|XP_002887547.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297333388|gb|EFH63806.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 763
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/123 (27%), Positives = 55/123 (44%)
Query: 2 ISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAI 61
I C+ G + ++ G + K DVV N ++ C+ + + KL +
Sbjct: 258 IQGLCQKGELDAAVRMVGRLIDQGPKPDVVTYNYLIYGLCKNSKFQEAEVYLGKLVNEGL 317
Query: 62 SPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEALS 121
PD T++ LI +CK M LA R +V+ G P+E SLI L + AL+
Sbjct: 318 EPDSFTYNTLIAGYCKGGMVQLAERILVNAVFNGFVPDEFTYRSLIDGLCHEGETNRALA 377
Query: 122 VYN 124
++N
Sbjct: 378 LFN 380
Score = 40.4 bits (93), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 25/102 (24%), Positives = 46/102 (45%), Gaps = 6/102 (5%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+++ C+ GC + L +K D+ N ++ Y ME+ + ++ + +
Sbjct: 432 LVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMMDNG 491
Query: 61 ISPDYNTFHILIKYFCKEKMY---MLAYRTMVDMHRKGHQPE 99
+ PD T++ L+ CK Y M Y+TMV+ KG P
Sbjct: 492 VDPDVYTYNSLLNGLCKTSKYEDVMETYKTMVE---KGCAPN 530
Score = 39.7 bits (91), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 37/79 (46%)
Query: 29 DVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYMLAYRTM 88
DV NS+L C+T E VM + + E +P+ TF+IL++ C+ A +
Sbjct: 495 DVYTYNSLLNGLCKTSKYEDVMETYKTMVEKGCAPNLFTFNILLESLCRYHKLDKALGLL 554
Query: 89 VDMHRKGHQPEEELCSSLI 107
+M K P+ +LI
Sbjct: 555 EEMKNKSVNPDAVTFGTLI 573
Score = 36.6 bits (83), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 23/112 (20%), Positives = 50/112 (44%)
Query: 34 NSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHR 93
N+++ +G + V ++ + I+PD +F I +K FC+ A R + +M
Sbjct: 115 NAIMSILVDSGYFDQAHKVYMRMRDRGITPDVYSFTIRMKSFCRTSRPHAALRLLNNMSS 174
Query: 94 KGHQPEEELCSSLIFHLGKMRAHSEALSVYNMLRYSKRSMCKALHEKILHIL 145
+G + +++ + E ++ + S S+C + K+LH+L
Sbjct: 175 QGCEMNVVAYCTVVGGFYEENFKDEGYELFGKMLASGVSLCLSTFNKLLHVL 226
Score = 35.8 bits (81), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 23/134 (17%), Positives = 50/134 (37%), Gaps = 36/134 (26%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDEL- 59
++ + CR ++ L + + K D V +++ +C+ GD++ + RK++E+
Sbjct: 537 LLESLCRYHKLDKALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKMEEVY 596
Query: 60 -----------------------------------AISPDYNTFHILIKYFCKEKMYMLA 84
+ PD T+ +++ FCK L
Sbjct: 597 MVSCSTPTYNIIIHAFTEKLNVTMAEKLFQEMVDRCLGPDGYTYRLMVDGFCKTGNVDLG 656
Query: 85 YRTMVDMHRKGHQP 98
Y+ +++M G P
Sbjct: 657 YKFLLEMMENGFIP 670
>gi|357499785|ref|XP_003620181.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355495196|gb|AES76399.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 559
Score = 53.5 bits (127), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/138 (24%), Positives = 68/138 (49%), Gaps = 2/138 (1%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I + C+ E L + +K DVV N+++ +C G M+ + K+
Sbjct: 218 IIDSMCKVKLVNEAFDLYSEMVSKGISPDVVTYNALISGFCIVGKMKDATDLFNKMIFEN 277
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
I+P+ TF+IL+ FCKE+ A + M ++G +P+ +SL+ ++ ++A
Sbjct: 278 INPNVYTFNILVDGFCKERRLKEAKNVLAMMMKQGIKPDVFTYNSLMDRYCLVKEVNKAK 337
Query: 121 SVYNMLRYSKRSMCKALH 138
++N + S+R + +H
Sbjct: 338 HIFNTI--SQRGVNPNIH 353
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/120 (25%), Positives = 55/120 (45%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ FC+ +E K + + K DV NS++ YC ++ H+ + +
Sbjct: 288 LVDGFCKERRLKEAKNVLAMMMKQGIKPDVFTYNSLMDRYCLVKEVNKAKHIFNTISQRG 347
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
++P+ +++ I+I FCK K A +MH P+ +SLI L K+ S AL
Sbjct: 348 VNPNIHSYSIMIHGFCKIKKVDEAMNLFKEMHCNNIIPDVVTYNSLIDGLCKLGKISYAL 407
Score = 39.3 bits (90), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 27/127 (21%), Positives = 56/127 (44%), Gaps = 6/127 (4%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C G + Q A + V +++ C+ G + + ++R++D
Sbjct: 148 LIKGLCLKGQIHQALQFHDKVVALGFHLNKVSYGTLINGLCKVGQTSAALQLLRRVDGKL 207
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFH---LGKMRAHS 117
+ P+ ++ +I CK K+ A+ +M KG P+ ++LI +GKM+
Sbjct: 208 VQPNVVMYNTIIDSMCKVKLVNEAFDLYSEMVSKGISPDVVTYNALISGFCIVGKMK--- 264
Query: 118 EALSVYN 124
+A ++N
Sbjct: 265 DATDLFN 271
Score = 37.7 bits (86), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 23/107 (21%), Positives = 48/107 (44%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C+ G +L + + +D + NS+L A C+ ++ + ++ K+ +
Sbjct: 393 LIDGLCKLGKISYALKLVDEMHDRGVPHDKITYNSILDALCKNHQVDKAIALLTKMKDEG 452
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLI 107
I PD T+ L+ CK A D+ KG+ + + +++I
Sbjct: 453 IQPDICTYTTLVDGLCKNGRLEDARIVFEDLLVKGYILDVNIYTAMI 499
Score = 36.6 bits (83), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 22/99 (22%), Positives = 43/99 (43%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
MI FC+ +E L + DVV NS++ C+ G + + ++ ++ +
Sbjct: 358 MIHGFCKIKKVDEAMNLFKEMHCNNIIPDVVTYNSLIDGLCKLGKISYALKLVDEMHDRG 417
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPE 99
+ D T++ ++ CK A + M +G QP+
Sbjct: 418 VPHDKITYNSILDALCKNHQVDKAIALLTKMKDEGIQPD 456
Score = 35.4 bits (80), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 25/123 (20%), Positives = 54/123 (43%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+IS FC G ++ L + +V N ++ +C+ ++ +V+ + +
Sbjct: 253 LISGFCIVGKMKDATDLFNKMIFENINPNVYTFNILVDGFCKERRLKEAKNVLAMMMKQG 312
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
I PD T++ L+ +C K A + ++G P S +I K++ EA+
Sbjct: 313 IKPDVFTYNSLMDRYCLVKEVNKAKHIFNTISQRGVNPNIHSYSIMIHGFCKIKKVDEAM 372
Query: 121 SVY 123
+++
Sbjct: 373 NLF 375
>gi|116310235|emb|CAH67244.1| OSIGBa0140O07.12 [Oryza sativa Indica Group]
Length = 581
Score = 53.5 bits (127), Expect = 3e-05, Method: Composition-based stats.
Identities = 36/126 (28%), Positives = 57/126 (45%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+IS +C++G E+ + D A + V N ++ Y + GD+ S + V +++ L
Sbjct: 326 VISGYCKAGKLEDAMAVYNDMVASGIMPNTVTYNVLINGYGKVGDLGSAVEVYQQMTRLR 385
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
PD TF LI +C+ A R DM + QP S +I L K EA+
Sbjct: 386 CPPDVVTFSSLIDGYCRCGQLDDALRIWSDMAQHRIQPNVYTFSIIIHSLCKQNRSDEAI 445
Query: 121 SVYNML 126
+ N L
Sbjct: 446 RLLNEL 451
Score = 40.0 bits (92), Expect = 0.28, Method: Composition-based stats.
Identities = 18/64 (28%), Positives = 34/64 (53%)
Query: 29 DVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYMLAYRTM 88
DVV +S++ YCR G ++ + + + + I P+ TF I+I CK+ A R +
Sbjct: 389 DVVTFSSLIDGYCRCGQLDDALRIWSDMAQHRIQPNVYTFSIIIHSLCKQNRSDEAIRLL 448
Query: 89 VDMH 92
+++
Sbjct: 449 NELN 452
Score = 39.7 bits (91), Expect = 0.42, Method: Composition-based stats.
Identities = 23/97 (23%), Positives = 45/97 (46%), Gaps = 1/97 (1%)
Query: 29 DVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYMLAYRTM 88
DV N ++ CR G ++ + ++ +++E SPD T +I++ C+ + +
Sbjct: 248 DVWSFNVVIKGVCRVGQVQKALELVERMNEFGCSPDTVTHNIIVDGLCRTNEVSRGHEVL 307
Query: 89 VDMHRKG-HQPEEELCSSLIFHLGKMRAHSEALSVYN 124
+ R G P +S+I K +A++VYN
Sbjct: 308 RRLQRDGVCMPNVVTFTSVISGYCKAGKLEDAMAVYN 344
Score = 35.8 bits (81), Expect = 6.6, Method: Composition-based stats.
Identities = 32/127 (25%), Positives = 50/127 (39%), Gaps = 1/127 (0%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I CR G ++ +L D V N ++ CRT ++ V+R+L
Sbjct: 255 VIKGVCRVGQVQKALELVERMNEFGCSPDTVTHNIIVDGLCRTNEVSRGHEVLRRLQRDG 314
Query: 61 IS-PDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEA 119
+ P+ TF +I +CK A DM G P + LI GK+ A
Sbjct: 315 VCMPNVVTFTSVISGYCKAGKLEDAMAVYNDMVASGIMPNTVTYNVLINGYGKVGDLGSA 374
Query: 120 LSVYNML 126
+ VY +
Sbjct: 375 VEVYQQM 381
>gi|147819144|emb|CAN78081.1| hypothetical protein VITISV_021300 [Vitis vinifera]
Length = 778
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 34/117 (29%), Positives = 59/117 (50%), Gaps = 5/117 (4%)
Query: 8 SGCFEETK-----QLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAIS 62
+GC E +K +L + K K + V N M+ YC+ G M+ + + K++E S
Sbjct: 356 NGCLEWSKISEAFKLLEEMSEKGVKPNAVTHNIMVKWYCKEGKMDDASNTITKMEESGFS 415
Query: 63 PDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEA 119
PD T++ LI +CK A+RTM +M RK + + ++++ L + + EA
Sbjct: 416 PDCVTYNTLINGYCKAGNMGEAFRTMDEMGRKNMKMDSVTLNTILRTLCREKKLEEA 472
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 26/127 (20%), Positives = 56/127 (44%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
M+ +C+ G ++ E D V N+++ YC+ G+M M ++
Sbjct: 389 MVKWYCKEGKMDDASNTITKMEESGFSPDCVTYNTLINGYCKAGNMGEAFRTMDEMGRKN 448
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ D T + +++ C+EK AY+ + ++G+ +E +LI K AL
Sbjct: 449 MKMDSVTLNTILRTLCREKKLEEAYKLLSSARKRGYFIDEVSYGTLIVGYFKDGNVDRAL 508
Query: 121 SVYNMLR 127
+++ ++
Sbjct: 509 KLWDEMK 515
Score = 44.3 bits (103), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 22/102 (21%), Positives = 47/102 (46%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ C G E+ +L + +K D V N+++ + C+ G ++ +++ +++E
Sbjct: 599 LLRGLCMEGMLEKALKLFNTWVSKGKAIDTVTYNTLITSLCKEGRLDDAFNLLSEMEEKE 658
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEEL 102
+ PD+ T++ +I A M M KG P + L
Sbjct: 659 LGPDHYTYNAIITALTDSGRIREAEEFMSKMLEKGXLPXQVL 700
Score = 40.8 bits (94), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 30/112 (26%), Positives = 46/112 (41%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C+ G E+ + D N++L YCR GD+E K+ E +
Sbjct: 529 IIGGLCQCGKTEQAISKLNELLESGLLPDETTYNTILHGYCREGDVEKAFQFHNKMVENS 588
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGK 112
PD T +IL++ C E M A + KG + ++LI L K
Sbjct: 589 FKPDVFTCNILLRGLCMEGMLEKALKLFNTWVSKGKAIDTVTYNTLITSLCK 640
Score = 37.7 bits (86), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 29/155 (18%), Positives = 65/155 (41%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I + + G + +L + + K V N ++ C+ G E + + +L E
Sbjct: 494 LIVGYFKDGNVDRALKLWDEMKEKEIIPSTVTYNCIIGGLCQCGKTEQAISKLNELLESG 553
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ PD T++ ++ +C+E A++ M +P+ C+ L+ L +AL
Sbjct: 554 LLPDETTYNTILHGYCREGDVEKAFQFHNKMVENSFKPDVFTCNILLRGLCMEGMLEKAL 613
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLKDAY 155
++N +++ + ++ L L DA+
Sbjct: 614 KLFNTWVSKGKAIDTVTYNTLITSLCKEGRLDDAF 648
Score = 35.4 bits (80), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 19/93 (20%), Positives = 44/93 (47%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ A C+ G + + L D +++ + N ++ YC+ G ++ +V+ + +
Sbjct: 249 ILDALCKKGRLGDARDLLMDMKSRGLLPNRNTYNILVYGYCKMGWLKEAANVIELMTQNN 308
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHR 93
+ PD T+++LI C E A++ +M
Sbjct: 309 LLPDVWTYNMLINGLCNEGRIEEAFKLRDEMEN 341
>gi|357500061|ref|XP_003620319.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355495334|gb|AES76537.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 496
Score = 53.5 bits (127), Expect = 3e-05, Method: Composition-based stats.
Identities = 35/123 (28%), Positives = 58/123 (47%)
Query: 2 ISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAI 61
+S FC+ G +E K + K K +VV +S++ YC ++ + + + +
Sbjct: 226 VSTFCKEGKVKEAKNVFAAMMKKGFKPNVVTYSSLMDGYCLVKEVNKAKSIFNNMAQGGV 285
Query: 62 SPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEALS 121
+PD +++ILI FCK KM A +MH + P +SLI L K S AL
Sbjct: 286 NPDIQSYNILINGFCKIKMTDAAMNLFEEMHCRKIIPNVVTYNSLIDGLCKSGKISYALK 345
Query: 122 VYN 124
+ +
Sbjct: 346 LVD 348
Score = 39.3 bits (90), Expect = 0.53, Method: Composition-based stats.
Identities = 19/77 (24%), Positives = 37/77 (48%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C+SG +L + + D++ +S+L A C+ + + ++ KL +
Sbjct: 330 LIDGLCKSGKISYALKLVDEMHDRGQPPDIITYSSLLDALCKNHPGDKAIALLTKLKDQG 389
Query: 61 ISPDYNTFHILIKYFCK 77
+ P+ T+ ILI CK
Sbjct: 390 LQPNMYTYTILINGLCK 406
Score = 36.2 bits (82), Expect = 5.0, Method: Composition-based stats.
Identities = 28/154 (18%), Positives = 65/154 (42%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ FC+ + L + + +VV NS++ C++G + + ++ ++ +
Sbjct: 295 LINGFCKIKMTDAAMNLFEEMHCRKIIPNVVTYNSLIDGLCKSGKISYALKLVDEMHDRG 354
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
PD T+ L+ CK A + + +G QP + LI L K +A
Sbjct: 355 QPPDIITYSSLLDALCKNHPGDKAIALLTKLKDQGLQPNMYTYTILINGLCKGGRPEDAQ 414
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLKDA 154
+++ L ++ + ++H+ + + +A
Sbjct: 415 NIFEDLLVKGYNINVNTYTVMIHVFCNNGMFGEA 448
>gi|359486541|ref|XP_002275423.2| PREDICTED: pentatricopeptide repeat-containing protein
At2g16880-like [Vitis vinifera]
Length = 778
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 34/117 (29%), Positives = 59/117 (50%), Gaps = 5/117 (4%)
Query: 8 SGCFEETK-----QLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAIS 62
+GC E +K +L + K K + V N M+ YC+ G M+ + + K++E S
Sbjct: 356 NGCLEWSKISEAFKLLEEMSEKGVKPNAVTHNIMVKWYCKEGKMDDASNTITKMEESGFS 415
Query: 63 PDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEA 119
PD T++ LI +CK A+RTM +M RK + + ++++ L + + EA
Sbjct: 416 PDCVTYNTLINGYCKAGNMGEAFRTMDEMGRKNMKMDSVTLNTILRTLCREKKLEEA 472
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/102 (21%), Positives = 49/102 (48%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ C G E+ +L + +K D V N+++ + C+ G ++ +++ +++E
Sbjct: 599 LLRGLCMEGVLEKALKLFNTWVSKGKAIDTVTYNTLITSLCKEGRLDDAFNLLSEMEEKE 658
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEEL 102
+ PD+ T++ +I A M M KG+ P++ L
Sbjct: 659 LGPDHYTYNAIITALTDSGRIREAEEFMSKMLEKGNLPDQVL 700
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 26/127 (20%), Positives = 56/127 (44%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
M+ +C+ G ++ E D V N+++ YC+ G+M M ++
Sbjct: 389 MVKWYCKEGKMDDASNTITKMEESGFSPDCVTYNTLINGYCKAGNMGEAFRTMDEMGRKN 448
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ D T + +++ C+EK AY+ + ++G+ +E +LI K AL
Sbjct: 449 MKMDSVTLNTILRTLCREKKLEEAYKLLSSARKRGYFIDEVSYGTLIVGYFKDGNVDRAL 508
Query: 121 SVYNMLR 127
+++ ++
Sbjct: 509 KLWDEMK 515
Score = 39.3 bits (90), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 29/112 (25%), Positives = 46/112 (41%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C+ G E+ + D N++L YCR GD+E K+ E +
Sbjct: 529 IIGGLCQCGKTEQAISKLNELLESGLLPDETTYNTILHGYCREGDVEKAFQFHNKMVENS 588
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGK 112
PD T +IL++ C E + A + KG + ++LI L K
Sbjct: 589 FKPDVFTCNILLRGLCMEGVLEKALKLFNTWVSKGKAIDTVTYNTLITSLCK 640
Score = 38.5 bits (88), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 29/155 (18%), Positives = 65/155 (41%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I + + G + +L + + K V N ++ C+ G E + + +L E
Sbjct: 494 LIVGYFKDGNVDRALKLWDEMKEKEIIPSTVTYNCIIGGLCQCGKTEQAISKLNELLESG 553
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ PD T++ ++ +C+E A++ M +P+ C+ L+ L +AL
Sbjct: 554 LLPDETTYNTILHGYCREGDVEKAFQFHNKMVENSFKPDVFTCNILLRGLCMEGVLEKAL 613
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLKDAY 155
++N +++ + ++ L L DA+
Sbjct: 614 KLFNTWVSKGKAIDTVTYNTLITSLCKEGRLDDAF 648
>gi|125548468|gb|EAY94290.1| hypothetical protein OsI_16061 [Oryza sativa Indica Group]
Length = 586
Score = 53.5 bits (127), Expect = 3e-05, Method: Composition-based stats.
Identities = 36/126 (28%), Positives = 57/126 (45%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+IS +C++G E+ + D A + V N ++ Y + GD+ S + V +++ L
Sbjct: 331 VISGYCKAGKLEDAMAVYNDMVASGIMPNTVTYNVLINGYGKVGDLGSAVEVYQQMTRLR 390
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
PD TF LI +C+ A R DM + QP S +I L K EA+
Sbjct: 391 CPPDVVTFSSLIDGYCRCGQLDDALRIWSDMAQHRIQPNVYTFSIIIHSLCKQNRSDEAI 450
Query: 121 SVYNML 126
+ N L
Sbjct: 451 CLLNEL 456
Score = 39.7 bits (91), Expect = 0.43, Method: Composition-based stats.
Identities = 23/97 (23%), Positives = 45/97 (46%), Gaps = 1/97 (1%)
Query: 29 DVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYMLAYRTM 88
DV N ++ CR G ++ + ++ +++E SPD T +I++ C+ + +
Sbjct: 253 DVWSFNVVIKGVCRVGQVQKALELVERMNEFGCSPDTVTHNIIVDGLCRTNEVSRGHEVL 312
Query: 89 VDMHRKG-HQPEEELCSSLIFHLGKMRAHSEALSVYN 124
+ R G P +S+I K +A++VYN
Sbjct: 313 RRLQRDGVCMPNVVTFTSVISGYCKAGKLEDAMAVYN 349
Score = 35.4 bits (80), Expect = 7.1, Method: Composition-based stats.
Identities = 32/127 (25%), Positives = 50/127 (39%), Gaps = 1/127 (0%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I CR G ++ +L D V N ++ CRT ++ V+R+L
Sbjct: 260 VIKGVCRVGQVQKALELVERMNEFGCSPDTVTHNIIVDGLCRTNEVSRGHEVLRRLQRDG 319
Query: 61 IS-PDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEA 119
+ P+ TF +I +CK A DM G P + LI GK+ A
Sbjct: 320 VCMPNVVTFTSVISGYCKAGKLEDAMAVYNDMVASGIMPNTVTYNVLINGYGKVGDLGSA 379
Query: 120 LSVYNML 126
+ VY +
Sbjct: 380 VEVYQQM 386
>gi|357147690|ref|XP_003574443.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g19720-like [Brachypodium distachyon]
Length = 859
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 50/99 (50%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
MI CRS +EE ++L D + + VV N+++ +Y R+GD+ + ++ +++E
Sbjct: 223 MIFGCCRSCKWEEARRLLDDMRKEGIEPGVVTWNTLISSYARSGDLNVAVELLEQMEESG 282
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPE 99
+ PD T+ L+ F + A + + M G +P
Sbjct: 283 VEPDVVTWTSLVSGFVHSDRGVEALQCFIRMRLAGVEPN 321
>gi|413941674|gb|AFW74323.1| hypothetical protein ZEAMMB73_642674 [Zea mays]
Length = 876
Score = 53.5 bits (127), Expect = 3e-05, Method: Composition-based stats.
Identities = 36/155 (23%), Positives = 71/155 (45%), Gaps = 10/155 (6%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
MI CRS +EE ++L D + + +V N+++ +Y R+G+++ M ++ +++E
Sbjct: 241 MIFGCCRSNEWEEARRLLDDMRRQGTEPGLVTWNTLVSSYARSGELDVAMEMLEQMEESG 300
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
++PD T+ L+ F A M G +P +S I +R S+ +
Sbjct: 301 VAPDVVTWTSLVSGFVHGDRGGEALWCFARMRLAGVEPNGMTIASAISACASLRLLSQGM 360
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLKDAY 155
++ C A+ ++ ++SG L D Y
Sbjct: 361 ELH----------CHAIKVGSVNNVLSGNSLVDMY 385
>gi|357449185|ref|XP_003594869.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355483917|gb|AES65120.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 545
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 36/124 (29%), Positives = 56/124 (45%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I FC+ G E K + K K DVV NS++ YC + + + +
Sbjct: 274 LIDGFCKEGKVREAKNVLAVMMKKNVKLDVVTYNSLMDGYCLVKQVNKAKSLFNVMAQRG 333
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
++PD ++ I+I FCK KM A + +MH K P +SL+ L K S AL
Sbjct: 334 VTPDVWSYSIMINGFCKIKMVDEAMKLFEEMHCKQIFPNVVTYNSLVDGLCKSGRTSCAL 393
Query: 121 SVYN 124
+ +
Sbjct: 394 ELVD 397
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/107 (25%), Positives = 50/107 (46%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ C+SG +L + + +++ NS+L A C+ ++ + ++ K+ E
Sbjct: 379 LVDGLCKSGRTSCALELVDEMHDRGQPSNIITYNSILDAICKNNHVDKAIVLLTKIKEKG 438
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLI 107
I PD T+ +LI CK A + D+ KG+ P +SLI
Sbjct: 439 IQPDIFTYTVLINGLCKVGRLDDAQKVFEDLLVKGYSPNIYTYTSLI 485
Score = 42.4 bits (98), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 29/126 (23%), Positives = 61/126 (48%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I + C+ + L + +K DVV +S++ +C G ++ + + ++
Sbjct: 204 IIDSMCKDKLVNDAFDLYCEMVSKRISPDVVTYSSLISGFCVVGKLKYAVDLFNRMISDN 263
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
I+P+ TF ILI FCKE A + M +K + + +SL+ ++ ++A
Sbjct: 264 INPNVYTFSILIDGFCKEGKVREAKNVLAVMMKKNVKLDVVTYNSLMDGYCLVKQVNKAK 323
Query: 121 SVYNML 126
S++N++
Sbjct: 324 SLFNVM 329
Score = 39.3 bits (90), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 24/107 (22%), Positives = 48/107 (44%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C G + A+ + D V +++ CR G+ ++ + ++R++D
Sbjct: 134 LIKGLCLKGEVHKALYFHDKVVAQGFQLDQVSYGTLINGLCRVGETKAAVQLLRRVDGKL 193
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLI 107
+ P+ + +I CK+K+ A+ +M K P+ SSLI
Sbjct: 194 VRPNVVMYSTIIDSMCKDKLVNDAFDLYCEMVSKRISPDVVTYSSLI 240
Score = 37.4 bits (85), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 27/123 (21%), Positives = 55/123 (44%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
MI+ FC+ +E +L + K +VV NS++ C++G + ++ ++ +
Sbjct: 344 MINGFCKIKMVDEAMKLFEEMHCKQIFPNVVTYNSLVDGLCKSGRTSCALELVDEMHDRG 403
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ T++ ++ CK A + + KG QP+ + LI L K+ +A
Sbjct: 404 QPSNIITYNSILDAICKNNHVDKAIVLLTKIKEKGIQPDIFTYTVLINGLCKVGRLDDAQ 463
Query: 121 SVY 123
V+
Sbjct: 464 KVF 466
>gi|224056475|ref|XP_002298874.1| predicted protein [Populus trichocarpa]
gi|222846132|gb|EEE83679.1| predicted protein [Populus trichocarpa]
Length = 948
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/119 (25%), Positives = 57/119 (47%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
MI C+ G +E+ QL D++ + ++ +C+ G +++ V+ K+ +
Sbjct: 191 MIDGLCKHGLLDESLQLLDMMFKDGASPDIITFSVLINGFCKAGKIKNAKEVICKMFKAG 250
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEA 119
++P+Y + LI CK+ A+R M R GH + +C+ LI L + +EA
Sbjct: 251 LAPNYVIYATLIYNSCKKGDITEAFRNYATMTRTGHDVDYFICNVLISSLCRAGRVAEA 309
Score = 45.1 bits (105), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 47/93 (50%)
Query: 20 DFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEK 79
+ E K D + +N++L Y R G ME V + K+ +++P T++IL+ + K+K
Sbjct: 491 EMEHKGINPDTIAINAVLDGYSRMGKMEKVEKLFIKMQSGSLTPSLATYNILLHGYSKKK 550
Query: 80 MYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGK 112
+ + M R G P++ C S+I L K
Sbjct: 551 DLLKCSKFYNIMTRMGISPDKLTCHSIILGLCK 583
Score = 38.1 bits (87), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 23/89 (25%), Positives = 42/89 (47%)
Query: 35 SMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRK 94
+M+ C+ G ++ + ++ + + SPD TF +LI FCK A + M +
Sbjct: 190 AMIDGLCKHGLLDESLQLLDMMFKDGASPDIITFSVLINGFCKAGKIKNAKEVICKMFKA 249
Query: 95 GHQPEEELCSSLIFHLGKMRAHSEALSVY 123
G P + ++LI++ K +EA Y
Sbjct: 250 GLAPNYVIYATLIYNSCKKGDITEAFRNY 278
Score = 37.7 bits (86), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 24/95 (25%), Positives = 44/95 (46%)
Query: 30 VVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYMLAYRTMV 89
+V N++L C+ G ++ ++ +++ I D T+++LI CK Y +
Sbjct: 10 IVTYNTILNWCCKKGRYKAASDLIDRMESKGIEADVCTYNMLIDDLCKNNRSAKGYLLLK 69
Query: 90 DMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVYN 124
M ++ P E ++LI L K R A V+N
Sbjct: 70 KMRKRMIAPNEFTYNTLINGLMKERKIGGATRVFN 104
>gi|302781560|ref|XP_002972554.1| hypothetical protein SELMODRAFT_97435 [Selaginella moellendorffii]
gi|300160021|gb|EFJ26640.1| hypothetical protein SELMODRAFT_97435 [Selaginella moellendorffii]
Length = 581
Score = 53.5 bits (127), Expect = 3e-05, Method: Composition-based stats.
Identities = 29/127 (22%), Positives = 61/127 (48%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ C++G FE+ L + AK + DV+ +++ C+ G +E+ ++ + L
Sbjct: 369 LIAGACKAGNFEQASALFEEMVAKNMQPDVMTFGALIDGLCKAGQVEAARDILDLMGNLG 428
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ P+ T+++L+ CK + +M G PE SL++ L + +AL
Sbjct: 429 VPPNVVTYNVLVHGLCKSGRIEEPCEFLEEMVSSGCVPESMTYGSLVYALCRASRTDDAL 488
Query: 121 SVYNMLR 127
+ + L+
Sbjct: 489 QLVSKLK 495
Score = 42.4 bits (98), Expect = 0.066, Method: Composition-based stats.
Identities = 24/99 (24%), Positives = 44/99 (44%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ C+SG EE + + + + + S++ A CR + + ++ KL
Sbjct: 439 LVHGLCKSGRIEEPCEFLEEMVSSGCVPESMTYGSLVYALCRASRTDDALQLVSKLKSFG 498
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPE 99
PD T++IL+ K A + +M KGHQP+
Sbjct: 499 WDPDTVTYNILVDGLWKSGKTEQAITVLEEMVGKGHQPD 537
Score = 42.4 bits (98), Expect = 0.067, Method: Composition-based stats.
Identities = 33/133 (24%), Positives = 57/133 (42%), Gaps = 12/133 (9%)
Query: 1 MISAFCRSGCFEET---KQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLD 57
+I C+ G +E +AG + +VV N+++ C+ ME ++ +
Sbjct: 231 LIDGLCKCGQTDEACNDDMIAGGYVP-----NVVTYNALVNGLCKADKMERAHAMIESMV 285
Query: 58 ELAISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHS 117
+ ++PD T+ +L+ FCK A + M +G P +S+I L K
Sbjct: 286 DKGVTPDVITYSVLVDAFCKASRVDEALELLHGMASRGCTPNVVTFNSIIDGLCKSDRSG 345
Query: 118 E----ALSVYNML 126
E AL VYN +
Sbjct: 346 EAFQIALQVYNRM 358
Score = 40.0 bits (92), Expect = 0.30, Method: Composition-based stats.
Identities = 29/126 (23%), Positives = 55/126 (43%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ AFC++ +E +L ++ +VV NS++ C++ + ++
Sbjct: 299 LVDAFCKASRVDEALELLHGMASRGCTPNVVTFNSIIDGLCKSDRSGEAFQIALQVYNRM 358
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ PD TF+ILI CK + A +M K QP+ +LI L K A
Sbjct: 359 LVPDKVTFNILIAGACKAGNFEQASALFEEMVAKNMQPDVMTFGALIDGLCKAGQVEAAR 418
Query: 121 SVYNML 126
+ +++
Sbjct: 419 DILDLM 424
Score = 37.0 bits (84), Expect = 2.9, Method: Composition-based stats.
Identities = 30/129 (23%), Positives = 53/129 (41%), Gaps = 2/129 (1%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ C+S +L + + DVV N+++ + C+ GD+E + +
Sbjct: 87 IINGLCKSNELGAGMELFEELVKRGHHPDVVTYNTLIDSLCKAGDLEEARRLHGGMSSRG 146
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQ--PEEELCSSLIFHLGKMRAHSE 118
P+ T+ +LI CK A + +M RK P +S + L K +E
Sbjct: 147 CVPNVVTYSVLINGLCKVGRIDEARELIQEMTRKSCDVLPNIITYNSFLDGLCKQSMTAE 206
Query: 119 ALSVYNMLR 127
A + LR
Sbjct: 207 ACELMRSLR 215
Score = 37.0 bits (84), Expect = 2.9, Method: Composition-based stats.
Identities = 23/81 (28%), Positives = 37/81 (45%), Gaps = 4/81 (4%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKY--DVVLLNSMLCAYCRTGDMESVMHVMRKLDE 58
+I+ C+ G +E ++L + K +++ NS L C+ +MR L +
Sbjct: 157 LINGLCKVGRIDEARELIQEMTRKSCDVLPNIITYNSFLDGLCKQSMTAEACELMRSLRD 216
Query: 59 --LAISPDYNTFHILIKYFCK 77
L +SPD TF LI CK
Sbjct: 217 GSLRVSPDTVTFSTLIDGLCK 237
>gi|357521289|ref|XP_003630933.1| Tau class glutathione S-transferase [Medicago truncatula]
gi|355524955|gb|AET05409.1| Tau class glutathione S-transferase [Medicago truncatula]
Length = 1320
Score = 53.5 bits (127), Expect = 3e-05, Method: Composition-based stats.
Identities = 32/127 (25%), Positives = 59/127 (46%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+++ FC SG E+ ++L K + NS++ YC +M + + + + +
Sbjct: 563 LMNGFCMSGMLEDGERLIEWMLEKGIMPNATTFNSLMKQYCIKNNMRATTEIYKAMHDRG 622
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ PD NT++ILIK CK + A+ +M KG+ +LI K + EA
Sbjct: 623 VMPDSNTYNILIKGHCKARNMKEAWFLHKEMVEKGYSVTAATYDALIRGFYKRKKFVEAR 682
Query: 121 SVYNMLR 127
++ +R
Sbjct: 683 KLFEEMR 689
Score = 47.8 bits (112), Expect = 0.001, Method: Composition-based stats.
Identities = 25/98 (25%), Positives = 48/98 (48%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C+SG E +++ + K + D V +++ YC+ G+M+ V ++ +
Sbjct: 388 VIHGICKSGKMVEAREMFNEMLVKGLEPDEVTYTALIDGYCKAGEMKEAFSVHNQMVQKG 447
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQP 98
++P+ T+ L CK +A + +M RKG QP
Sbjct: 448 LTPNVVTYTALADGLCKNGEIDVANELLHEMSRKGLQP 485
Score = 47.0 bits (110), Expect = 0.002, Method: Composition-based stats.
Identities = 30/121 (24%), Positives = 55/121 (45%), Gaps = 3/121 (2%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+++ C+ G E+T +L + + D + +++ AYC+ G+M ++R +
Sbjct: 493 IVNGLCKIGNIEQTVKLMEEMDLAGFYPDTITYTTLMDAYCKMGEMAKAHELLRIMLNKR 552
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHL---GKMRAHS 117
+ P TF++L+ FC M R + M KG P +SL+ MRA +
Sbjct: 553 LQPTLVTFNVLMNGFCMSGMLEDGERLIEWMLEKGIMPNATTFNSLMKQYCIKNNMRATT 612
Query: 118 E 118
E
Sbjct: 613 E 613
Score = 43.9 bits (102), Expect = 0.022, Method: Composition-based stats.
Identities = 31/126 (24%), Positives = 57/126 (45%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C++G E +QL D V+ +++ +C+ G++ + + ++
Sbjct: 318 IILLLCKNGEVVEAEQLLRGMRKWGVFPDNVVYTTVISGFCKLGNVSAACKLFDEMRRKK 377
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
I PD T+ +I CK + A +M KG +P+E ++LI K EA
Sbjct: 378 IVPDIVTYTSVIHGICKSGKMVEAREMFNEMLVKGLEPDEVTYTALIDGYCKAGEMKEAF 437
Query: 121 SVYNML 126
SV+N +
Sbjct: 438 SVHNQM 443
Score = 43.1 bits (100), Expect = 0.036, Method: Composition-based stats.
Identities = 28/119 (23%), Positives = 55/119 (46%)
Query: 6 CRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDY 65
CR G ++ +L + + K K D + N+++ C+ G++ ++R + + + PD
Sbjct: 288 CRIGELDKVLKLVDELKGKGLKPDEYIYNNIILLLCKNGEVVEAEQLLRGMRKWGVFPDN 347
Query: 66 NTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVYN 124
+ +I FCK A + +M RK P+ +S+I + K EA ++N
Sbjct: 348 VVYTTVISGFCKLGNVSAACKLFDEMRRKKIVPDIVTYTSVIHGICKSGKMVEAREMFN 406
Score = 41.6 bits (96), Expect = 0.12, Method: Composition-based stats.
Identities = 30/142 (21%), Positives = 62/142 (43%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ A+C+ G + +L K + +V N ++ +C +G +E ++ + E
Sbjct: 528 LMDAYCKMGEMAKAHELLRIMLNKRLQPTLVTFNVLMNGFCMSGMLEDGERLIEWMLEKG 587
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
I P+ TF+ L+K +C + MH +G P+ + LI K R EA
Sbjct: 588 IMPNATTFNSLMKQYCIKNNMRATTEIYKAMHDRGVMPDSNTYNILIKGHCKARNMKEAW 647
Query: 121 SVYNMLRYSKRSMCKALHEKIL 142
++ + S+ A ++ ++
Sbjct: 648 FLHKEMVEKGYSVTAATYDALI 669
Score = 40.0 bits (92), Expect = 0.30, Method: Composition-based stats.
Identities = 22/98 (22%), Positives = 45/98 (45%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+ C++G + +L + K + +V N+++ C+ G++E + +M ++D
Sbjct: 458 LADGLCKNGEIDVANELLHEMSRKGLQPNVYTYNTIVNGLCKIGNIEQTVKLMEEMDLAG 517
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQP 98
PD T+ L+ +CK A+ + M K QP
Sbjct: 518 FYPDTITYTTLMDAYCKMGEMAKAHELLRIMLNKRLQP 555
Score = 39.3 bits (90), Expect = 0.51, Method: Composition-based stats.
Identities = 25/98 (25%), Positives = 42/98 (42%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+IS FC+ G +L + K D+V S++ C++G M + ++
Sbjct: 353 VISGFCKLGNVSAACKLFDEMRRKKIVPDIVTYTSVIHGICKSGKMVEAREMFNEMLVKG 412
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQP 98
+ PD T+ LI +CK A+ M +KG P
Sbjct: 413 LEPDEVTYTALIDGYCKAGEMKEAFSVHNQMVQKGLTP 450
Score = 36.6 bits (83), Expect = 3.3, Method: Composition-based stats.
Identities = 33/153 (21%), Positives = 71/153 (46%), Gaps = 1/153 (0%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ C+ G E L + + DVV ++ YCR G+++ V+ ++ +L
Sbjct: 248 VLHCLCQLGKVREAHNLLVQMTDRGNFPDVVSYGVVVSGYCRIGELDKVLKLVDELKGKG 307
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ PD ++ +I CK + A + + M + G P+ + +++I K+ S A
Sbjct: 308 LKPDEYIYNNIILLLCKNGEVVEAEQLLRGMRKWGVFPDNVVYTTVISGFCKLGNVSAAC 367
Query: 121 SVYNMLRYSKRSMCKALHEKILH-ILISGKLLK 152
+++ +R K + ++H I SGK+++
Sbjct: 368 KLFDEMRRKKIVPDIVTYTSVIHGICKSGKMVE 400
>gi|356529513|ref|XP_003533335.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62670,
mitochondrial-like [Glycine max]
Length = 794
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/107 (28%), Positives = 51/107 (47%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ A + G +E K + K DV N+++ Y +++ HV + +
Sbjct: 523 LVDALGKEGKVKEAKSVLAVMLKACVKPDVFTYNTLMNGYLLVYEVKKAQHVFNAMSLMG 582
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLI 107
++PD +T+ ILI FCK KM A +MH+K P+ SSL+
Sbjct: 583 VTPDVHTYTILINGFCKSKMVDEALNLFKEMHQKNMVPDTVTYSSLV 629
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/121 (23%), Positives = 53/121 (43%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ C+SG L + + DV+ NS++ C+ G ++ + + K+ +
Sbjct: 628 LVDGLCKSGRISYVWDLIDEMRDRGQPADVITYNSLIDGLCKNGHLDKAIALFNKMKDQG 687
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
I P+ TF IL+ CK A D+ KG+ + + + +I+ K EAL
Sbjct: 688 IRPNTFTFTILLDGLCKGGRLKDAQEVFQDLLTKGYHLDVYIYNVMIYGHCKQGLLEEAL 747
Query: 121 S 121
+
Sbjct: 748 T 748
Score = 45.1 bits (105), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 29/126 (23%), Positives = 54/126 (42%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C G +E A+ + + V +++ CR GD + + +RK+D
Sbjct: 69 LIKGLCLKGQVKEALHFHDKLLAQGFQLNQVSYATLINGVCRIGDTRAAIKFLRKIDGRL 128
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
P+ ++ +I CK ++ AY +M KG S+LI+ + EAL
Sbjct: 129 AKPNVEMYNTIIDALCKYQLVSEAYGLFSEMTVKGISANVVTYSTLIYGFCIVGKLKEAL 188
Query: 121 SVYNML 126
+ N++
Sbjct: 189 GLLNVM 194
Score = 40.8 bits (94), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 26/122 (21%), Positives = 58/122 (47%), Gaps = 1/122 (0%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ A C+ G +E K + K +V+ ++++ Y +++ HV + +
Sbjct: 209 LVDALCKEGKVKEAKSVLAVMLKACVKSNVITYSTLMDGYFLVYEVKKAQHVFNAMSLMG 268
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
++PD ++++I+I FCK K A +M P + + ++ KM+ +S A+
Sbjct: 269 VTPDVHSYNIMINGFCKIKRVDKALNLFKEMILSRFPPIIQF-NKILDSFAKMKHYSTAV 327
Query: 121 SV 122
S+
Sbjct: 328 SL 329
Score = 40.8 bits (94), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 26/124 (20%), Positives = 52/124 (41%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C G ++ A+ + + V +++ C+ GD + ++RK+D
Sbjct: 383 LIKGLCLKGQVKKALHFHDKLLAQGFQLNQVSYATLINGVCKIGDTRGAIKLLRKIDGRL 442
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
P+ + +I CK ++ AY +M KG + S+LI+ + EA+
Sbjct: 443 TKPNVEMYSTIIDALCKYQLVSEAYGLFSEMTVKGISADVVTYSTLIYGFCIVGKLKEAI 502
Query: 121 SVYN 124
+ N
Sbjct: 503 GLLN 506
Score = 40.4 bits (93), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 19/78 (24%), Positives = 40/78 (51%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ C+ G ++ +++ D K DV + N M+ +C+ G +E + ++ K++E
Sbjct: 698 LLDGLCKGGRLKDAQEVFQDLLTKGYHLDVYIYNVMIYGHCKQGLLEEALTMLSKMEENG 757
Query: 61 ISPDYNTFHILIKYFCKE 78
P+ TF I+I K+
Sbjct: 758 CIPNAVTFDIIINALFKK 775
Score = 36.6 bits (83), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 19/78 (24%), Positives = 37/78 (47%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I A C+ E L + K DVV ++++ +C G ++ + ++ ++
Sbjct: 453 IIDALCKYQLVSEAYGLFSEMTVKGISADVVTYSTLIYGFCIVGKLKEAIGLLNEMVLKT 512
Query: 61 ISPDYNTFHILIKYFCKE 78
I+PD T+ IL+ KE
Sbjct: 513 INPDVRTYTILVDALGKE 530
Score = 36.2 bits (82), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 18/78 (23%), Positives = 38/78 (48%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I A C+ E L + K +VV ++++ +C G ++ + ++ +
Sbjct: 139 IIDALCKYQLVSEAYGLFSEMTVKGISANVVTYSTLIYGFCIVGKLKEALGLLNVMVLKT 198
Query: 61 ISPDYNTFHILIKYFCKE 78
I+P+ T++IL+ CKE
Sbjct: 199 INPNVCTYNILVDALCKE 216
>gi|225454300|ref|XP_002275491.1| PREDICTED: pentatricopeptide repeat-containing protein At3g61520,
mitochondrial [Vitis vinifera]
gi|297745328|emb|CBI40408.3| unnamed protein product [Vitis vinifera]
Length = 765
Score = 53.1 bits (126), Expect = 3e-05, Method: Composition-based stats.
Identities = 37/155 (23%), Positives = 68/155 (43%), Gaps = 10/155 (6%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I AFC E+ +L + D ++ +++ + G ++ V+ K+ E
Sbjct: 492 LIRAFCNVNNIEKAMELFDEMLEAGCSPDAIVYYTLISGLSQAGKLDRASFVLSKMKEAG 551
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
SPD +F++LI FC++ AY + +M G +P+ ++LI H K S A
Sbjct: 552 FSPDIVSFNVLINGFCRKNKLDEAYEMLKEMENAGIKPDGVTYNTLISHFSKTGDFSTA- 610
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLKDAY 155
R M K + E ++ +++ L AY
Sbjct: 611 ---------HRLMKKMVKEGLVPTVVTYGALIHAY 636
Score = 46.6 bits (109), Expect = 0.004, Method: Composition-based stats.
Identities = 27/99 (27%), Positives = 48/99 (48%), Gaps = 1/99 (1%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+IS F ++G F +L + VV +++ AYC G+++ M + R + +
Sbjct: 597 LISHFSKTGDFSTAHRLMKKMVKEGLVPTVVTYGALIHAYCLNGNLDEAMKIFRDMSSTS 656
Query: 61 -ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQP 98
+ P+ ++ILI C++ LA M DM KG +P
Sbjct: 657 KVPPNTVIYNILINSLCRKNQVDLALSLMDDMKVKGVKP 695
Score = 43.5 bits (101), Expect = 0.028, Method: Composition-based stats.
Identities = 24/98 (24%), Positives = 44/98 (44%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ FCR +E ++ + E K D V N+++ + +TGD + +M+K+ +
Sbjct: 562 LINGFCRKNKLDEAYEMLKEMENAGIKPDGVTYNTLISHFSKTGDFSTAHRLMKKMVKEG 621
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQP 98
+ P T+ LI +C A + DM P
Sbjct: 622 LVPTVVTYGALIHAYCLNGNLDEAMKIFRDMSSTSKVP 659
Score = 36.2 bits (82), Expect = 4.2, Method: Composition-based stats.
Identities = 36/145 (24%), Positives = 59/145 (40%), Gaps = 19/145 (13%)
Query: 1 MISAFCRSG-------CFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVM 53
+IS CRSG +L G EA N++L A R + + + ++
Sbjct: 276 LISRLCRSGRTDRAWDVLHGLMKLGGVMEAAS-------CNALLTALGRAREFKRMNTLL 328
Query: 54 RKLDELAISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGH-----QPEEELCSSLIF 108
++ E+ I P+ TF ILI + CK + A M+ +P+ ++LI
Sbjct: 329 AEMKEMDIQPNVVTFGILINHLCKFRRVDEALEVFEKMNGGESNGFLVEPDVITYNTLID 388
Query: 109 HLGKMRAHSEALSVYNMLRYSKRSM 133
L K+ E L + +R R M
Sbjct: 389 GLCKVGRQEEGLGLVERMRSQPRCM 413
>gi|359481971|ref|XP_003632699.1| PREDICTED: pentatricopeptide repeat-containing protein At5g12100,
mitochondrial-like [Vitis vinifera]
Length = 819
Score = 53.1 bits (126), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/112 (25%), Positives = 57/112 (50%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+++A C+ G E+ +++ F V N+++ YC+ GD+ + K++ +
Sbjct: 363 LLNALCKEGNMEKAEEVLKKFLENGLAPVGVFFNTIVNGYCQVGDINKAYTTIEKMEAVG 422
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGK 112
+ P++ T++ L+K FC+ K A + + M KG P E ++LI G+
Sbjct: 423 LRPNHVTYNSLVKKFCEMKNMEEAEKCIKKMVEKGVLPNVETYNTLIDGYGR 474
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/94 (26%), Positives = 48/94 (51%), Gaps = 2/94 (2%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ C+ G E + LA + K +DV+ NS++ Y G+++ + + + +
Sbjct: 573 LINGLCKKGKVMEAENLASEITRKGLSFDVITYNSLISGYSSAGNVQKALELYETMKKSG 632
Query: 61 ISPDYNTFHILIKYFCKEKMYMLA--YRTMVDMH 92
I P NT+H LI KE + ++ Y+ M+ M+
Sbjct: 633 IKPTLNTYHRLIAGCGKEGLVLVEKIYQEMLQMN 666
Score = 40.4 bits (93), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 19/99 (19%), Positives = 46/99 (46%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C+ ++ ++L + + + + N+++ YC+ G +E ++ ++
Sbjct: 223 VIGGLCKEKRMKDAEKLFDEMLDRRVAPNRITYNTLIDGYCKVGQLEEAFNIRERMKVEN 282
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPE 99
+ P TF+ L+ C+ +M A R + +M G P+
Sbjct: 283 VEPTIITFNSLLNGLCRAQMMEEAQRVLEEMEVYGFVPD 321
Score = 39.7 bits (91), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 23/84 (27%), Positives = 41/84 (48%)
Query: 36 MLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKG 95
+L A C+ G+ME V++K E ++P F+ ++ +C+ AY T+ M G
Sbjct: 363 LLNALCKEGNMEKAEEVLKKFLENGLAPVGVFFNTIVNGYCQVGDINKAYTTIEKMEAVG 422
Query: 96 HQPEEELCSSLIFHLGKMRAHSEA 119
+P +SL+ +M+ EA
Sbjct: 423 LRPNHVTYNSLVKKFCEMKNMEEA 446
Score = 37.7 bits (86), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 30/136 (22%), Positives = 58/136 (42%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I + G ++ L EA+ + D + N ++ + + G M V +++ +
Sbjct: 677 LIHCYVEHGDVQKACSLHSAMEAQGIQPDKMTYNCLILGHFKEGRMHKVKNLVNDMKIRG 736
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ P T+ ILI CK K + AY +M G P +C +LI L + +A
Sbjct: 737 LIPKTETYDILIVGHCKLKDFDGAYVWYREMFENGFTPSVSICDNLITGLREEGRSHDAD 796
Query: 121 SVYNMLRYSKRSMCKA 136
+ + + + C+A
Sbjct: 797 VICSEMNMKGKDDCRA 812
Score = 37.0 bits (84), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 30/126 (23%), Positives = 50/126 (39%), Gaps = 3/126 (2%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I +C+ G EE + + + + ++ NS+L CR ME V+ +++
Sbjct: 258 LIDGYCKVGQLEEAFNIRERMKVENVEPTIITFNSLLNGLCRAQMMEEAQRVLEEMEVYG 317
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHL---GKMRAHS 117
PD T+ L K + + RKG Q + CS L+ L G M
Sbjct: 318 FVPDRFTYTTLFDGHLKCGNVDASITLSEEAVRKGVQILDYTCSILLNALCKEGNMEKAE 377
Query: 118 EALSVY 123
E L +
Sbjct: 378 EVLKKF 383
Score = 35.4 bits (80), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 28/129 (21%), Positives = 53/129 (41%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ C+ E + + GD + + + N ++ C G ++ ++
Sbjct: 503 LINCLCKDANILEAEVILGDMVHRGVVPNAQIYNMLIDGSCIAGKLKDAFRFFDEMVARE 562
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
I P T++ILI CK+ M A ++ RKG + +SLI +AL
Sbjct: 563 IVPTLVTYNILINGLCKKGKVMEAENLASEITRKGLSFDVITYNSLISGYSSAGNVQKAL 622
Query: 121 SVYNMLRYS 129
+Y ++ S
Sbjct: 623 ELYETMKKS 631
>gi|449481246|ref|XP_004156125.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At2g02150-like [Cucumis
sativus]
Length = 822
Score = 53.1 bits (126), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 33/124 (26%), Positives = 53/124 (42%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I + + G EE L + + D++ N ++ YC+ M ++
Sbjct: 271 LIDGYGKVGSLEEVASLFNEMKDVGCVPDIITYNGLINCYCKFEKMPRAFEYFSEMKNNG 330
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ P+ T+ LI FCKE M A + + DM R G P E +SLI K +EA
Sbjct: 331 LKPNVVTYSTLIDAFCKEGMMQGAIKLLXDMRRTGLLPNEFTYTSLIDANCKAGNLTEAW 390
Query: 121 SVYN 124
+ N
Sbjct: 391 KLLN 394
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 29/107 (27%), Positives = 50/107 (46%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
MI C+ G E +++L DVV NS++ Y + G +E V + ++ ++
Sbjct: 236 MIDYLCKEGDLENSRRLFVQMREMGLSPDVVTYNSLIDGYGKVGSLEEVASLFNEMKDVG 295
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLI 107
PD T++ LI +CK + A+ +M G +P S+LI
Sbjct: 296 CVPDIITYNGLINCYCKFEKMPRAFEYFSEMKNNGLKPNVVTYSTLI 342
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 29/124 (23%), Positives = 57/124 (45%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C + C E K+L + + + D+ +++ + G+++ + ++ ++ ELA
Sbjct: 586 LIDGLCXNNCIESAKKLFDEMQCRGMTPDITAFTALIDGNLKHGNLQEALVLISRMTELA 645
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
I D + + L+ F + A + +M KG PEE LC L+ K EA+
Sbjct: 646 IEFDLHVYTSLVSGFSQCGELHQARKFFNEMIEKGILPEEVLCICLLREYYKRGQLDEAI 705
Query: 121 SVYN 124
+ N
Sbjct: 706 ELKN 709
Score = 42.4 bits (98), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 25/94 (26%), Positives = 45/94 (47%)
Query: 34 NSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHR 93
N +L ++G+ + V + I+P T++++I Y CKE + R V M
Sbjct: 199 NFLLHRLSKSGNGQLVRKFFNDMIGAGIAPSVFTYNVMIDYLCKEGDLENSRRLFVQMRE 258
Query: 94 KGHQPEEELCSSLIFHLGKMRAHSEALSVYNMLR 127
G P+ +SLI GK+ + E S++N ++
Sbjct: 259 MGLSPDVVTYNSLIDGYGKVGSLEEVASLFNEMK 292
Score = 39.7 bits (91), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 29/133 (21%), Positives = 64/133 (48%)
Query: 27 KYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYMLAYR 86
K +VV ++++ A+C+ G M+ + ++ + + P+ T+ LI CK A++
Sbjct: 332 KPNVVTYSTLIDAFCKEGMMQGAIKLLXDMRRTGLLPNEFTYTSLIDANCKAGNLTEAWK 391
Query: 87 TMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVYNMLRYSKRSMCKALHEKILHILI 146
+ DM + G + ++L+ L K EA V+ + S + ++ ++H I
Sbjct: 392 LLNDMLQAGVKLNIVTYTALLDGLCKAGRMIEAEEVFRSMLKDGISPNQQVYTALVHGYI 451
Query: 147 SGKLLKDAYIVVK 159
+ ++DA ++K
Sbjct: 452 KAERMEDAMKILK 464
Score = 39.7 bits (91), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 26/108 (24%), Positives = 48/108 (44%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I A C++G E +L D K ++V ++L C+ G M V R + +
Sbjct: 376 LIDANCKAGNLTEAWKLLNDMLQAGVKLNIVTYTALLDGLCKAGRMIEAEEVFRSMLKDG 435
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIF 108
ISP+ + L+ + K + A + + M +P+ L S+I+
Sbjct: 436 ISPNQQVYTALVHGYIKAERMEDAMKILKQMTECNIKPDLILYGSIIW 483
Score = 36.6 bits (83), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 23/107 (21%), Positives = 49/107 (45%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C EETK + + +++ + V+ +++ AY + G ++ +++ ++
Sbjct: 481 IIWGHCSQRKLEETKLILEEMKSRGISANPVISTTIIDAYFKAGKSSDALNFFQEMQDVG 540
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLI 107
+ T+ +LI C+ + LA M G QP + +SLI
Sbjct: 541 VEATIVTYCVLIDGLCEAGIVELAVDYFCRMLSLGLQPNVAVYTSLI 587
Score = 35.4 bits (80), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 20/107 (18%), Positives = 46/107 (42%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I AFC+ G + +L D + S++ A C+ G++ ++ + +
Sbjct: 341 LIDAFCKEGMMQGAIKLLXDMRRTGLLPNEFTYTSLIDANCKAGNLTEAWKLLNDMLQAG 400
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLI 107
+ + T+ L+ CK + A M + G P +++ ++L+
Sbjct: 401 VKLNIVTYTALLDGLCKAGRMIEAEEVFRSMLKDGISPNQQVYTALV 447
>gi|21686921|gb|AAK71569.2|AC087852_29 putative reverse transcriptase [Oryza sativa Japonica Group]
Length = 1833
Score = 53.1 bits (126), Expect = 3e-05, Method: Composition-based stats.
Identities = 31/128 (24%), Positives = 64/128 (50%), Gaps = 2/128 (1%)
Query: 33 LNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYMLAYRTMVDMH 92
N+++ +C+ ++ + M ++ + SP T+ L++ +C EK + Y ++D
Sbjct: 1552 FNTLVHGWCKARMLKEALDTMEEMKQHGFSPSVVTYTSLVEAYCMEKDFQTVY-ALLDEM 1610
Query: 93 RKGHQPEEELCSSLIFH-LGKMRAHSEALSVYNMLRYSKRSMCKALHEKILHILISGKLL 151
RK P + +++ H LGK EAL ++ L+ + + + +++IL L
Sbjct: 1611 RKRRCPPNVVTYTILMHALGKAGRTREALDTFDKLKEDGVAPDASFYNSLIYILGRAGRL 1670
Query: 152 KDAYIVVK 159
+DAY VV+
Sbjct: 1671 EDAYSVVE 1678
Score = 40.4 bits (93), Expect = 0.24, Method: Composition-based stats.
Identities = 28/127 (22%), Positives = 55/127 (43%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ +C++ +E + + VV S++ AYC D ++V ++ ++ +
Sbjct: 1555 LVHGWCKARMLKEALDTMEEMKQHGFSPSVVTYTSLVEAYCMEKDFQTVYALLDEMRKRR 1614
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
P+ T+ IL+ K A T + G P+ +SLI+ LG+ +A
Sbjct: 1615 CPPNVVTYTILMHALGKAGRTREALDTFDKLKEDGVAPDASFYNSLIYILGRAGRLEDAY 1674
Query: 121 SVYNMLR 127
SV +R
Sbjct: 1675 SVVEEMR 1681
Score = 40.4 bits (93), Expect = 0.26, Method: Composition-based stats.
Identities = 22/99 (22%), Positives = 45/99 (45%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I R+G E+ + + +V N+++ A C E+ + ++ K++E +
Sbjct: 1660 LIYILGRAGRLEDAYSVVEEMRTTGIAPNVTTFNTLISAACDHSQAENALKLLVKMEEQS 1719
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPE 99
+PD T+ L+K CK + + + M RK P+
Sbjct: 1720 CNPDIKTYTPLLKLCCKRQWVKILLFLVCHMFRKDISPD 1758
Score = 35.0 bits (79), Expect = 9.4, Method: Composition-based stats.
Identities = 22/101 (21%), Positives = 47/101 (46%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+ISA C E +L E + D+ +L C+ ++ ++ ++ +
Sbjct: 1695 LISAACDHSQAENALKLLVKMEEQSCNPDIKTYTPLLKLCCKRQWVKILLFLVCHMFRKD 1754
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEE 101
ISPD++T+ +L+ + C+ + + +M KG P++E
Sbjct: 1755 ISPDFSTYTLLVSWLCRNGKVAQSCLFLEEMVSKGFAPKQE 1795
>gi|356540361|ref|XP_003538658.1| PREDICTED: pentatricopeptide repeat-containing protein At1g52640,
mitochondrial-like [Glycine max]
Length = 523
Score = 53.1 bits (126), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/99 (27%), Positives = 52/99 (52%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ A C+ GC +E K + D +K + D + + +YC D++S + V+ K+
Sbjct: 257 LLQALCKGGCVDEAKTIFHDMLSKRVEPDAFTYSIFIHSYCDADDVQSALRVLDKMRRYN 316
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPE 99
I P+ T++ +IK CK + AY + +M +G +P+
Sbjct: 317 ILPNVFTYNCIIKRLCKNEHVEEAYLLLDEMISRGVRPD 355
>gi|218193742|gb|EEC76169.1| hypothetical protein OsI_13484 [Oryza sativa Indica Group]
Length = 1874
Score = 53.1 bits (126), Expect = 4e-05, Method: Composition-based stats.
Identities = 31/128 (24%), Positives = 64/128 (50%), Gaps = 2/128 (1%)
Query: 33 LNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYMLAYRTMVDMH 92
N+++ +C+ ++ + M ++ + SP T+ L++ +C EK + Y ++D
Sbjct: 1593 FNTLVHGWCKARMLKEALDTMEEMKQHGFSPSVVTYTSLVEAYCMEKDFQTVY-ALLDEM 1651
Query: 93 RKGHQPEEELCSSLIFH-LGKMRAHSEALSVYNMLRYSKRSMCKALHEKILHILISGKLL 151
RK P + +++ H LGK EAL ++ L+ + + + +++IL L
Sbjct: 1652 RKRRCPPNVVTYTILMHALGKAGRTREALDTFDKLKEDGVAPDASFYNSLIYILGRAGRL 1711
Query: 152 KDAYIVVK 159
+DAY VV+
Sbjct: 1712 EDAYSVVE 1719
Score = 40.4 bits (93), Expect = 0.24, Method: Composition-based stats.
Identities = 28/127 (22%), Positives = 55/127 (43%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ +C++ +E + + VV S++ AYC D ++V ++ ++ +
Sbjct: 1596 LVHGWCKARMLKEALDTMEEMKQHGFSPSVVTYTSLVEAYCMEKDFQTVYALLDEMRKRR 1655
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
P+ T+ IL+ K A T + G P+ +SLI+ LG+ +A
Sbjct: 1656 CPPNVVTYTILMHALGKAGRTREALDTFDKLKEDGVAPDASFYNSLIYILGRAGRLEDAY 1715
Query: 121 SVYNMLR 127
SV +R
Sbjct: 1716 SVVEEMR 1722
Score = 40.4 bits (93), Expect = 0.27, Method: Composition-based stats.
Identities = 22/99 (22%), Positives = 45/99 (45%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I R+G E+ + + +V N+++ A C E+ + ++ K++E +
Sbjct: 1701 LIYILGRAGRLEDAYSVVEEMRTTGIAPNVTTFNTLISAACDHSQAENALKLLVKMEEQS 1760
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPE 99
+PD T+ L+K CK + + + M RK P+
Sbjct: 1761 CNPDIKTYTPLLKLCCKRQWVKILLFLVCHMFRKDISPD 1799
Score = 35.0 bits (79), Expect = 9.7, Method: Composition-based stats.
Identities = 22/101 (21%), Positives = 47/101 (46%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+ISA C E +L E + D+ +L C+ ++ ++ ++ +
Sbjct: 1736 LISAACDHSQAENALKLLVKMEEQSCNPDIKTYTPLLKLCCKRQWVKILLFLVCHMFRKD 1795
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEE 101
ISPD++T+ +L+ + C+ + + +M KG P++E
Sbjct: 1796 ISPDFSTYTLLVSWLCRNGKVAQSCLFLEEMVSKGFAPKQE 1836
>gi|224100421|ref|XP_002311869.1| predicted protein [Populus trichocarpa]
gi|222851689|gb|EEE89236.1| predicted protein [Populus trichocarpa]
Length = 470
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 27/107 (25%), Positives = 52/107 (48%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+++ C+SG + +L + E D + +++ AYC+TG+M ++R++ +
Sbjct: 226 LVNGLCKSGNIRQAVKLMEEMEVAGMYPDTITFTTLMDAYCKTGEMVKAHELLREMLDRG 285
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLI 107
+ P TF++L+ FC M R + M KG P +SL+
Sbjct: 286 LQPTVITFNVLMNGFCMSGMLEDGERLLAWMLEKGIMPNTTTYNSLM 332
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/124 (24%), Positives = 60/124 (48%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ +C G ++ +L + + K K ++ NS++ C++G ++ V+R++
Sbjct: 16 VINGYCLGGELQKVLKLIQEMQMKGLKPNLYTYNSIILLLCKSGKVDDAERVLREMINQG 75
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
I PD + LI FCK AY+ +M ++ P+ +++I L + EA
Sbjct: 76 IVPDTVVYTTLIDGFCKLGNIQAAYKLFDEMEKQRIVPDFIAYTAVICGLCRCGKMMEAD 135
Query: 121 SVYN 124
V+N
Sbjct: 136 KVFN 139
Score = 45.1 bits (105), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 58/127 (45%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+++ FC SG E+ ++L K + NS++ YC +M + + +
Sbjct: 296 LMNGFCMSGMLEDGERLLAWMLEKGIMPNTTTYNSLMKQYCIRNNMRCTTEIYKGMCARG 355
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ PD NT++ILIK CK + A+ +M KG +S+I K + SEA
Sbjct: 356 VMPDSNTYNILIKGHCKARNMKEAWFLHKEMAEKGFNLTASSYNSIIKGFFKKKKISEAR 415
Query: 121 SVYNMLR 127
++ +R
Sbjct: 416 ELFEEMR 422
Score = 43.9 bits (102), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 25/98 (25%), Positives = 41/98 (41%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I FC+ G + +L + E + D + +++C CR G M V K+
Sbjct: 86 LIDGFCKLGNIQAAYKLFDEMEKQRIVPDFIAYTAVICGLCRCGKMMEADKVFNKMFSRG 145
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQP 98
+ PD T+ LI +CK A+ M + G P
Sbjct: 146 VEPDEVTYTTLIDGYCKSGEMEKAFSLHNQMVQSGLTP 183
Score = 43.5 bits (101), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 21/98 (21%), Positives = 48/98 (48%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+ C+ G + +L + K + ++ NS++ C++G++ + +M +++
Sbjct: 191 LADGLCKLGQVDTANELLHEMCGKGLQLNICTYNSLVNGLCKSGNIRQAVKLMEEMEVAG 250
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQP 98
+ PD TF L+ +CK + A+ + +M +G QP
Sbjct: 251 MYPDTITFTTLMDAYCKTGEMVKAHELLREMLDRGLQP 288
Score = 42.4 bits (98), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 26/129 (20%), Positives = 64/129 (49%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C+SG ++ +++ + + D V+ +++ +C+ G++++ + ++++
Sbjct: 51 IILLLCKSGKVDDAERVLREMINQGIVPDTVVYTTLIDGFCKLGNIQAAYKLFDEMEKQR 110
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
I PD+ + +I C+ M A + M +G +P+E ++LI K +A
Sbjct: 111 IVPDFIAYTAVICGLCRCGKMMEADKVFNKMFSRGVEPDEVTYTTLIDGYCKSGEMEKAF 170
Query: 121 SVYNMLRYS 129
S++N + S
Sbjct: 171 SLHNQMVQS 179
Score = 40.4 bits (93), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 23/93 (24%), Positives = 50/93 (53%), Gaps = 3/93 (3%)
Query: 26 DKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYMLAY 85
D DVV ++++ YC G+++ V+ +++++ + P+ T++ +I CK A
Sbjct: 6 DAPDVVSYSTVINGYCLGGELQKVLKLIQEMQMKGLKPNLYTYNSIILLLCKSGKVDDAE 65
Query: 86 RTMVDMHRKGHQPEEELCSSLI---FHLGKMRA 115
R + +M +G P+ + ++LI LG ++A
Sbjct: 66 RVLREMINQGIVPDTVVYTTLIDGFCKLGNIQA 98
Score = 37.0 bits (84), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 22/97 (22%), Positives = 44/97 (45%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I CR G E ++ ++ + D V +++ YC++G+ME + ++ +
Sbjct: 121 VICGLCRCGKMMEADKVFNKMFSRGVEPDEVTYTTLIDGYCKSGEMEKAFSLHNQMVQSG 180
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQ 97
++P+ T+ L CK A + +M KG Q
Sbjct: 181 LTPNVVTYTALADGLCKLGQVDTANELLHEMCGKGLQ 217
>gi|297741630|emb|CBI32762.3| unnamed protein product [Vitis vinifera]
Length = 648
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 66/157 (42%), Gaps = 23/157 (14%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I +C SG +E +L E K + DV NS+ C+ + ++ + E
Sbjct: 410 LIDGYCESGMVDEALRLQVVMEKKGLESDVFAYNSIASGLCKLNRKDEAKGLLFSMVERG 469
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+SP+ +F LI +CKE ++ A R +M KG+ P +
Sbjct: 470 VSPNTMSFTTLIDIYCKEGNFVEAKRVFREMEEKGNVPN--------------------I 509
Query: 121 SVYNML--RYSKRSMCKALHEKILHILISGKLLKDAY 155
YN+L YSKR K H K+ L + L+ D Y
Sbjct: 510 ITYNVLIDGYSKRGNMKEAH-KLKDELENRGLIPDVY 545
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/127 (22%), Positives = 61/127 (48%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I +C+ G F E K++ + E K + +++ N ++ Y + G+M+ + +L+
Sbjct: 480 LIDIYCKEGNFVEAKRVFREMEEKGNVPNIITYNVLIDGYSKRGNMKEAHKLKDELENRG 539
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ PD T LI C + +A + +M ++G P +++I L K EA
Sbjct: 540 LIPDVYTCTSLIHGECIDGKVDMALKLFDEMPQRGLVPNVVTYTAMISGLSKDGRSEEAF 599
Query: 121 SVYNMLR 127
+Y+ ++
Sbjct: 600 KLYDEMK 606
Score = 38.9 bits (89), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 25/107 (23%), Positives = 50/107 (46%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I F G EE ++L + K + DV + S++ CR+G+++ + + ++ +
Sbjct: 305 LIHGFSNIGKIEEAQRLFEEMREKGIEADVYVYTSIISCNCRSGNVKRALVLFDEMTDKG 364
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLI 107
+ P +T+ LI CK A + +M KG + ++LI
Sbjct: 365 LIPSAHTYGALIHGVCKAGQMEAAQMLVNEMQGKGIDLNPVIFNTLI 411
Score = 38.9 bits (89), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 23/107 (21%), Positives = 49/107 (45%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+ S C+ +E K L + + + +++ YC+ G+ V R+++E
Sbjct: 445 IASGLCKLNRKDEAKGLLFSMVERGVSPNTMSFTTLIDIYCKEGNFVEAKRVFREMEEKG 504
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLI 107
P+ T+++LI + K A++ ++ +G P+ C+SLI
Sbjct: 505 NVPNIITYNVLIDGYSKRGNMKEAHKLKDELENRGLIPDVYTCTSLI 551
Score = 38.5 bits (88), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 24/122 (19%), Positives = 57/122 (46%), Gaps = 3/122 (2%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I + + G +E +L + E + DV S++ C G ++ + + ++ +
Sbjct: 515 LIDGYSKRGNMKEAHKLKDELENRGLIPDVYTCTSLIHGECIDGKVDMALKLFDEMPQRG 574
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ P+ T+ +I K+ A++ +M G P++ + SSL+ G + + E++
Sbjct: 575 LVPNVVTYTAMISGLSKDGRSEEAFKLYDEMKETGLTPDDTVYSSLV---GSLHSADESI 631
Query: 121 SV 122
S+
Sbjct: 632 SM 633
Score = 35.8 bits (81), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 29/119 (24%), Positives = 51/119 (42%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+IS CRSG + L + K +++ C+ G ME+ ++ ++
Sbjct: 340 IISCNCRSGNVKRALVLFDEMTDKGLIPSAHTYGALIHGVCKAGQMEAAQMLVNEMQGKG 399
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEA 119
I + F+ LI +C+ M A R V M +KG + + +S+ L K+ EA
Sbjct: 400 IDLNPVIFNTLIDGYCESGMVDEALRLQVVMEKKGLESDVFAYNSIASGLCKLNRKDEA 458
>gi|224086515|ref|XP_002307901.1| predicted protein [Populus trichocarpa]
gi|222853877|gb|EEE91424.1| predicted protein [Populus trichocarpa]
Length = 724
Score = 53.1 bits (126), Expect = 4e-05, Method: Composition-based stats.
Identities = 37/127 (29%), Positives = 60/127 (47%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I AF R G +E +L D + D + N ++ A C+TG +E + + ++
Sbjct: 528 LIHAFLRRGEIQEALKLVNDMLFRGCPLDEITYNGLIKALCKTGAVEKGLGLFEEMIRKG 587
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
++P T +ILI FC A M DM +G P+ +SLI L K EAL
Sbjct: 588 LTPSIITCNILINGFCTAGKVHNALEFMRDMIHRGFSPDIVTYNSLINGLCKRGRIQEAL 647
Query: 121 SVYNMLR 127
+++ L+
Sbjct: 648 NLFEKLQ 654
Score = 50.1 bits (118), Expect = 3e-04, Method: Composition-based stats.
Identities = 30/123 (24%), Positives = 59/123 (47%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+++ C+ G F +L D +AK K ++ ++ +C+ G +E ++R++
Sbjct: 388 LVNGLCKKGLFGSALELVNDMDAKGCKPNLNTYTILIDGFCKKGQLEEAGLILREMLTKG 447
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
S + ++ LI CK A +M KG +P+ +SLIF L ++ +AL
Sbjct: 448 FSLNTVGYNALISALCKHGKIHEALDMFGEMSSKGCKPDIFTFNSLIFGLCRVDEMEDAL 507
Query: 121 SVY 123
++Y
Sbjct: 508 ALY 510
Score = 49.7 bits (117), Expect = 4e-04, Method: Composition-based stats.
Identities = 42/151 (27%), Positives = 70/151 (46%), Gaps = 10/151 (6%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+ISA C+ G E + G+ +K K D+ NS++ CR +ME + + R +
Sbjct: 458 LISALCKHGKIHEALDMFGEMSSKGCKPDIFTFNSLIFGLCRVDEMEDALALYRDMVLEG 517
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ + TF+ LI F + A + + DM +G +E + LI L K A + L
Sbjct: 518 VIANSVTFNTLIHAFLRRGEIQEALKLVNDMLFRGCPLDEITYNGLIKALCKTGAVEKGL 577
Query: 121 SVY-NMLRYSKRSMCKALHEKIL--HILISG 148
++ M+R K L I+ +ILI+G
Sbjct: 578 GLFEEMIR-------KGLTPSIITCNILING 601
Score = 45.1 bits (105), Expect = 0.010, Method: Composition-based stats.
Identities = 29/119 (24%), Positives = 52/119 (43%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I A C++G E+ L + K ++ N ++ +C G + + + MR +
Sbjct: 563 LIKALCKTGAVEKGLGLFEEMIRKGLTPSIITCNILINGFCTAGKVHNALEFMRDMIHRG 622
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEA 119
SPD T++ LI CK A + +G QP+ ++LI L + A +A
Sbjct: 623 FSPDIVTYNSLINGLCKRGRIQEALNLFEKLQAEGIQPDSITYNTLICWLCREGAFDDA 681
Score = 40.8 bits (94), Expect = 0.16, Method: Composition-based stats.
Identities = 33/130 (25%), Positives = 55/130 (42%), Gaps = 13/130 (10%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKY-------DVVLLNSMLCAYCRTGDMESVMHVM 53
+++ F R+G E YDK DV ++++ C+ G S + ++
Sbjct: 352 LVNGFVRNGRLNEATAFV------YDKMINNGYVPDVFTFSTLVNGLCKKGLFGSALELV 405
Query: 54 RKLDELAISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKM 113
+D P+ NT+ ILI FCK+ A + +M KG ++LI L K
Sbjct: 406 NDMDAKGCKPNLNTYTILIDGFCKKGQLEEAGLILREMLTKGFSLNTVGYNALISALCKH 465
Query: 114 RAHSEALSVY 123
EAL ++
Sbjct: 466 GKIHEALDMF 475
Score = 36.6 bits (83), Expect = 3.1, Method: Composition-based stats.
Identities = 19/78 (24%), Positives = 39/78 (50%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ C+ G +E L +A+ + D + N+++C CR G + ++ + E
Sbjct: 633 LINGLCKRGRIQEALNLFEKLQAEGIQPDSITYNTLICWLCREGAFDDACFLLYRGVENG 692
Query: 61 ISPDYNTFHILIKYFCKE 78
P+ T++IL+ F K+
Sbjct: 693 FVPNDVTWNILVYNFGKQ 710
>gi|414864980|tpg|DAA43537.1| TPA: hypothetical protein ZEAMMB73_764503 [Zea mays]
Length = 649
Score = 53.1 bits (126), Expect = 4e-05, Method: Composition-based stats.
Identities = 31/107 (28%), Positives = 52/107 (48%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I +CR G FE QL + + DVV NS++ CR GD+ + +
Sbjct: 408 LIHGYCRQGNFENALQLFDTLLRQRLRPDVVTYNSLIDGMCRKGDLAKANELWDDMHARE 467
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLI 107
I P++ T+ ILI C++ A+ + +M +KG+ P +S+I
Sbjct: 468 ILPNHITYSILIDSHCEKGQVEDAFGFLDEMVKKGNLPNIRTYNSII 514
Score = 44.7 bits (104), Expect = 0.014, Method: Composition-based stats.
Identities = 26/107 (24%), Positives = 52/107 (48%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I FCR+G E ++ + DVV N++L C+ + ++ +++E
Sbjct: 338 VIGGFCRAGSMSEALRVRDEMVGFGCLPDVVTYNTLLNGLCKQHRLLDAEKLLNEMEERG 397
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLI 107
++PD TF LI +C++ + A + + R+ +P+ +SLI
Sbjct: 398 VTPDLCTFTTLIHGYCRQGNFENALQLFDTLLRQRLRPDVVTYNSLI 444
Score = 43.9 bits (102), Expect = 0.022, Method: Composition-based stats.
Identities = 30/124 (24%), Positives = 57/124 (45%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I FCR G +E + + + +Y DVV + ++ + R G+M+ +R++ L
Sbjct: 268 LIGGFCRVGEVKEAVKFYKEMQHRYVTPDVVSFSCLIGLFSRRGEMDHAGAYLREMKGLG 327
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ PD + ++I FC+ A R +M G P+ ++L+ L K +A
Sbjct: 328 LVPDGVIYTMVIGGFCRAGSMSEALRVRDEMVGFGCLPDVVTYNTLLNGLCKQHRLLDAE 387
Query: 121 SVYN 124
+ N
Sbjct: 388 KLLN 391
Score = 41.6 bits (96), Expect = 0.099, Method: Composition-based stats.
Identities = 23/99 (23%), Positives = 49/99 (49%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I + C G E+ + K + ++ NS++ YCR+G+++ ++K+ +
Sbjct: 478 LIDSHCEKGQVEDAFGFLDEMVKKGNLPNIRTYNSIIKGYCRSGNVKKGQQFLQKMRQDN 537
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPE 99
+ PD TF+ LI + KE+ A+ M ++ +P+
Sbjct: 538 VFPDLITFNTLIHGYIKEENMHGAFNVFNIMEKEMVRPD 576
Score = 41.6 bits (96), Expect = 0.10, Method: Composition-based stats.
Identities = 28/107 (26%), Positives = 48/107 (44%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I A R+G + L + K +V NS+L C+ + V R +D+ +
Sbjct: 198 LIDARFRAGDVDAAIALVDSMANRGLKPGIVTYNSVLKGLCKHRRFDKAKEVFRTMDQCS 257
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLI 107
++PD +F+ILI FC+ A + +M + P+ S LI
Sbjct: 258 VAPDVRSFNILIGGFCRVGEVKEAVKFYKEMQHRYVTPDVVSFSCLI 304
Score = 41.6 bits (96), Expect = 0.10, Method: Composition-based stats.
Identities = 24/107 (22%), Positives = 49/107 (45%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I +CRSG ++ +Q D++ N+++ Y + +M +V +++
Sbjct: 513 IIKGYCRSGNVKKGQQFLQKMRQDNVFPDLITFNTLIHGYIKEENMHGAFNVFNIMEKEM 572
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLI 107
+ PD T++++I F ++ A R M G +P+ SLI
Sbjct: 573 VRPDAVTYNMIINGFSEQGNMQDAGRVFKGMGDSGIEPDRYTYMSLI 619
Score = 40.8 bits (94), Expect = 0.21, Method: Composition-based stats.
Identities = 24/107 (22%), Positives = 47/107 (43%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+++ C+ + ++L + E + D+ +++ YCR G+ E+ + + L
Sbjct: 373 LLNGLCKQHRLLDAEKLLNEMEERGVTPDLCTFTTLIHGYCRQGNFENALQLFDTLLRQR 432
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLI 107
+ PD T++ LI C++ A DMH + P S LI
Sbjct: 433 LRPDVVTYNSLIDGMCRKGDLAKANELWDDMHAREILPNHITYSILI 479
Score = 40.0 bits (92), Expect = 0.30, Method: Composition-based stats.
Identities = 22/98 (22%), Positives = 45/98 (45%)
Query: 29 DVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYMLAYRTM 88
D V+ ++ +CR G M + V ++ PD T++ L+ CK+ + A + +
Sbjct: 331 DGVIYTMVIGGFCRAGSMSEALRVRDEMVGFGCLPDVVTYNTLLNGLCKQHRLLDAEKLL 390
Query: 89 VDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVYNML 126
+M +G P+ ++LI + AL +++ L
Sbjct: 391 NEMEERGVTPDLCTFTTLIHGYCRQGNFENALQLFDTL 428
Score = 38.1 bits (87), Expect = 1.3, Method: Composition-based stats.
Identities = 25/128 (19%), Positives = 59/128 (46%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
M+ ++C++ F+ + + E + DVV N ++ A R GD+++ + ++ +
Sbjct: 163 MVHSYCKTLEFDGADTVISEMEKRCVFPDVVTHNVLIDARFRAGDVDAAIALVDSMANRG 222
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ P T++ ++K CK + + A M + P+ + LI ++ EA+
Sbjct: 223 LKPGIVTYNSVLKGLCKHRRFDKAKEVFRTMDQCSVAPDVRSFNILIGGFCRVGEVKEAV 282
Query: 121 SVYNMLRY 128
Y +++
Sbjct: 283 KFYKEMQH 290
Score = 37.0 bits (84), Expect = 2.9, Method: Composition-based stats.
Identities = 25/122 (20%), Positives = 55/122 (45%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ C+ F++ K++ + DV N ++ +CR G+++ + +++
Sbjct: 233 VLKGLCKHRRFDKAKEVFRTMDQCSVAPDVRSFNILIGGFCRVGEVKEAVKFYKEMQHRY 292
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
++PD +F LI F + A + +M G P+ + + +I + + SEAL
Sbjct: 293 VTPDVVSFSCLIGLFSRRGEMDHAGAYLREMKGLGLVPDGVIYTMVIGGFCRAGSMSEAL 352
Query: 121 SV 122
V
Sbjct: 353 RV 354
>gi|413941673|gb|AFW74322.1| hypothetical protein ZEAMMB73_642674 [Zea mays]
Length = 1028
Score = 53.1 bits (126), Expect = 4e-05, Method: Composition-based stats.
Identities = 36/155 (23%), Positives = 71/155 (45%), Gaps = 10/155 (6%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
MI CRS +EE ++L D + + +V N+++ +Y R+G+++ M ++ +++E
Sbjct: 241 MIFGCCRSNEWEEARRLLDDMRRQGTEPGLVTWNTLVSSYARSGELDVAMEMLEQMEESG 300
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
++PD T+ L+ F A M G +P +S I +R S+ +
Sbjct: 301 VAPDVVTWTSLVSGFVHGDRGGEALWCFARMRLAGVEPNGMTIASAISACASLRLLSQGM 360
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLKDAY 155
++ C A+ ++ ++SG L D Y
Sbjct: 361 ELH----------CHAIKVGSVNNVLSGNSLVDMY 385
>gi|302806665|ref|XP_002985064.1| hypothetical protein SELMODRAFT_424099 [Selaginella moellendorffii]
gi|300147274|gb|EFJ13939.1| hypothetical protein SELMODRAFT_424099 [Selaginella moellendorffii]
Length = 1636
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 68/157 (43%), Gaps = 6/157 (3%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ FCR G + +L + + + + N+++ +CR DME V++ + +
Sbjct: 341 LVDGFCRVGDLDGAVELVRKMTERGYRPNAITYNNIMHVFCRRNDMERAHQVLQMMIQTG 400
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
PD + +I FCK A+ + M R+G +P+ S+LI L K A A
Sbjct: 401 CPPDAINYSTIISGFCKAGKLREAHDLLEQMIRRGCRPDVACLSTLIDALCKAAAIDSA- 459
Query: 121 SVYNMLRYSKRSMCKA---LHEKILHILISGKLLKDA 154
+LR S C + ++H L K L +A
Sbjct: 460 --QELLRMSIGMDCAPDVVAYSILIHALCKAKRLPEA 494
Score = 44.7 bits (104), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 31/127 (24%), Positives = 60/127 (47%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+IS FC++G E L + + DV L++++ A C+ ++S ++R +
Sbjct: 411 IISGFCKAGKLREAHDLLEQMIRRGCRPDVACLSTLIDALCKAAAIDSAQELLRMSIGMD 470
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+PD + ILI CK K A + M + P+ +S++ L K R ++A
Sbjct: 471 CAPDVVAYSILIHALCKAKRLPEAESWLDVMVKNRCYPDVVTYNSVVDGLCKSRRINDAF 530
Query: 121 SVYNMLR 127
+++ +R
Sbjct: 531 LLFDRMR 537
Score = 42.0 bits (97), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 24/117 (20%), Positives = 58/117 (49%), Gaps = 3/117 (2%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ C+ +E ++ + + +V+ +++ +CR GD++ + ++RK+ E
Sbjct: 306 VINGLCKLDQVDEACRVMDKMIQRGCQPNVITYGTLVDGFCRVGDLDGAVELVRKMTERG 365
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHL---GKMR 114
P+ T++ ++ FC+ A++ + M + G P+ S++I GK+R
Sbjct: 366 YRPNAITYNNIMHVFCRRNDMERAHQVLQMMIQTGCPPDAINYSTIISGFCKAGKLR 422
Score = 41.2 bits (95), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 23/99 (23%), Positives = 48/99 (48%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ + +SG ++ +L D +K +VV +S+L C+ G ++ +++++
Sbjct: 954 IVDSLVKSGKVDDACRLVEDMVSKGCSPNVVTYSSLLHGLCKAGKLDEATALLQRMTRSG 1013
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPE 99
SP+ T++ +I CK AY + +M G QP
Sbjct: 1014 CSPNIVTYNTIIDGHCKLGRIDEAYHLLEEMVDGGCQPN 1052
Score = 40.8 bits (94), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 50/99 (50%), Gaps = 1/99 (1%)
Query: 29 DVVLLNSMLCAYCRTGDMESVMHVMRKLD-ELAISPDYNTFHILIKYFCKEKMYMLAYRT 87
++V NS++ C++ + +++R++ + SPD T++ +I CK K AY+
Sbjct: 1192 NLVTYNSLVHGLCKSRRFDQAEYLLREMTRKQGCSPDIITYNTVIDGLCKSKRVDRAYKL 1251
Query: 88 MVDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVYNML 126
+ M G P++ S +I L K R EA +V ++
Sbjct: 1252 FLQMLSDGLAPDDVTYSIVISSLCKWRFMDEANNVLELM 1290
Score = 40.4 bits (93), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 24/121 (19%), Positives = 55/121 (45%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I FC++G ++ ++ +K DVV + + + G + ++ +
Sbjct: 1305 LIDGFCKTGNLDKALEILQLLLSKGSYPDVVTFSIFIDWLSKRGRLRQAGELLETMLRAG 1364
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ PD T++ L+K FC + A M + G +P+ ++L+ HL +++ + L
Sbjct: 1365 LVPDTVTYNTLLKGFCDASLTEDAVDLFEVMRQCGCEPDNATYTTLVGHLVDKKSYKDLL 1424
Query: 121 S 121
+
Sbjct: 1425 A 1425
Score = 40.0 bits (92), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 36/166 (21%), Positives = 73/166 (43%), Gaps = 34/166 (20%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ C++G +E L ++V N+++ +C+ G ++ H++ ++ +
Sbjct: 989 LLHGLCKAGKLDEATALLQRMTRSGCSPNIVTYNTIIDGHCKLGRIDEAYHLLEEMVDGG 1048
Query: 61 ISPDYNTFHILIKYFCK---------------EKMY---MLAYRTMVDMHRKGHQPEE-- 100
P+ T+ +L+ FCK EK Y + Y +++DM K + E
Sbjct: 1049 CQPNVVTYTVLLDAFCKCGKAEDAIGLVEVMVEKGYVPNLFTYNSLLDMFCKKDEVERAC 1108
Query: 101 ELCSSLIFHLGKMRAHSEALSVYNMLRYSK--RSMCKA--LHEKIL 142
+L SS+I + V N++ Y+ +CKA +HE +L
Sbjct: 1109 QLLSSMI----------QKGCVPNVVSYNTVIAGLCKATKVHEGVL 1144
Score = 38.5 bits (88), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 27/131 (20%), Positives = 61/131 (46%)
Query: 29 DVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYMLAYRTM 88
DVV + ++ ++C+ +++S ++ ++ E PD T+ LI CK A+
Sbjct: 544 DVVTYSIVIHSFCKDNNLDSAFKMLERMKEAKCVPDVVTYSALINGLCKAGTVDKAFDVF 603
Query: 89 VDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVYNMLRYSKRSMCKALHEKILHILISG 148
+M G P ++LI L K+ +A + ++R + + +++ L +
Sbjct: 604 QEMLGCGCAPNLVTYNTLIDGLCKINKVEQAAEMLEIMRKQSCTPDSITYTCLINGLCNA 663
Query: 149 KLLKDAYIVVK 159
L++A+ V++
Sbjct: 664 SRLEEAWRVLR 674
Score = 38.5 bits (88), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 24/120 (20%), Positives = 52/120 (43%)
Query: 34 NSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHR 93
+++ +C+TG+++ + +++ L PD TF I I + K A + M R
Sbjct: 1303 GTLIDGFCKTGNLDKALEILQLLLSKGSYPDVVTFSIFIDWLSKRGRLRQAGELLETMLR 1362
Query: 94 KGHQPEEELCSSLIFHLGKMRAHSEALSVYNMLRYSKRSMCKALHEKILHILISGKLLKD 153
G P+ ++L+ +A+ ++ ++R A + ++ L+ K KD
Sbjct: 1363 AGLVPDTVTYNTLLKGFCDASLTEDAVDLFEVMRQCGCEPDNATYTTLVGHLVDKKSYKD 1422
Score = 38.1 bits (87), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 33/137 (24%), Positives = 58/137 (42%), Gaps = 4/137 (2%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDEL- 59
+I CR+G +L + +V+L N ++ C ++S + + ++++E
Sbjct: 883 LIHGLCRAGDIGTAYELLKEMPRHGVPQNVILHNVVIKGLCSARKLDSALELFKEMEESG 942
Query: 60 AISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEA 119
+ PD T+ ++ K A R + DM KG P SSL+ L K EA
Sbjct: 943 SCPPDVFTYSTIVDSLVKSGKVDDACRLVEDMVSKGCSPNVVTYSSLLHGLCKAGKLDEA 1002
Query: 120 LSVYNMLRYSKRSMCKA 136
+ +L+ RS C
Sbjct: 1003 TA---LLQRMTRSGCSP 1016
Score = 38.1 bits (87), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 31/124 (25%), Positives = 54/124 (43%), Gaps = 2/124 (1%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKY-DVVLLNSMLCAYCRTGDMESVMHVMRKLDEL 59
+I A C++ E + D K Y DVV NS++ C++ + + ++
Sbjct: 481 LIHALCKAKRLPEAESWL-DVMVKNRCYPDVVTYNSVVDGLCKSRRINDAFLLFDRMRAA 539
Query: 60 AISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEA 119
+ PD T+ I+I FCK+ A++ + M P+ S+LI L K +A
Sbjct: 540 GVMPDVVTYSIVIHSFCKDNNLDSAFKMLERMKEAKCVPDVVTYSALINGLCKAGTVDKA 599
Query: 120 LSVY 123
V+
Sbjct: 600 FDVF 603
Score = 37.4 bits (85), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 26/151 (17%), Positives = 62/151 (41%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ C++G ++ + + ++V N+++ C+ +E ++ + + +
Sbjct: 586 LINGLCKAGTVDKAFDVFQEMLGCGCAPNLVTYNTLIDGLCKINKVEQAAEMLEIMRKQS 645
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+PD T+ LI C A+R + +M KG P+ +L+ L K
Sbjct: 646 CTPDSITYTCLINGLCNASRLEEAWRVLREMKDKGCLPDRMTYGTLLRALQKTNNLELVE 705
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLL 151
+ + ++ A ++ +I G +L
Sbjct: 706 QLLKEMEATEEGQWNANGARLHRFVIRGDVL 736
Score = 36.6 bits (83), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 31/127 (24%), Positives = 57/127 (44%), Gaps = 1/127 (0%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C+ G +E L + + +VV +L A+C+ G E + ++ + E
Sbjct: 1024 IIDGHCKLGRIDEAYHLLEEMVDGGCQPNVVTYTVLLDAFCKCGKAEDAIGLVEVMVEKG 1083
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGK-MRAHSEA 119
P+ T++ L+ FCK+ A + + M +KG P +++I L K + H
Sbjct: 1084 YVPNLFTYNSLLDMFCKKDEVERACQLLSSMIQKGCVPNVVSYNTVIAGLCKATKVHEGV 1143
Query: 120 LSVYNML 126
L + ML
Sbjct: 1144 LLLEQML 1150
>gi|356529507|ref|XP_003533332.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Glycine max]
Length = 546
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 30/107 (28%), Positives = 52/107 (48%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ A C+ G +E K + K DV+ ++++ Y +++ HV + +
Sbjct: 275 LVDALCKEGKVKEAKNVLAVMLKACVKPDVITYSTLMDGYFLVYELKKAQHVFNAMSLMG 334
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLI 107
++PD +++ ILI FCK KM A +MH+K P SSLI
Sbjct: 335 VTPDVHSYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLI 381
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 27/124 (21%), Positives = 52/124 (41%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C G + A+ K+D V +++ C+ GD + ++RK+D
Sbjct: 135 LIKGLCLKGQVNKALHFHDKLLAQGIKFDQVSYGTLINGVCKIGDTRGAIKLVRKIDGRL 194
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
P+ ++ +I CK ++ AY +M KG + ++LI+ EA+
Sbjct: 195 TKPNVEMYNTIIDALCKYQLVSEAYGLFSEMTAKGISADVVTYTTLIYGFCIASKLKEAI 254
Query: 121 SVYN 124
+ N
Sbjct: 255 GLLN 258
Score = 40.8 bits (94), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 23/96 (23%), Positives = 41/96 (42%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C+SG L + + +V+ NS++ C+ G ++ + + K+ +
Sbjct: 380 LIDGLCKSGRISYVWDLIDEMRDRGIPANVITYNSLIDGLCKNGHLDRAIALFNKMKDQG 439
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGH 96
I P TF IL+ CK A D+ KG+
Sbjct: 440 IRPCSFTFTILLDGLCKGGRLKDAQEAFQDLLTKGY 475
Score = 38.5 bits (88), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 19/78 (24%), Positives = 38/78 (48%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ C+ G ++ ++ D K DV N M+ +C+ G +E + ++ K++E
Sbjct: 450 LLDGLCKGGRLKDAQEAFQDLLTKGYHLDVYKYNVMINGHCKQGLLEEALTMLSKMEENG 509
Query: 61 ISPDYNTFHILIKYFCKE 78
P+ TF I+I K+
Sbjct: 510 CVPNAVTFDIIINALFKK 527
Score = 38.1 bits (87), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 24/107 (22%), Positives = 49/107 (45%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I A C+ E L + AK DVV +++ +C ++ + ++ ++
Sbjct: 205 IIDALCKYQLVSEAYGLFSEMTAKGISADVVTYTTLIYGFCIASKLKEAIGLLNEMVLKT 264
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLI 107
I+P+ T++IL+ CKE A + M + +P+ S+L+
Sbjct: 265 INPNVYTYNILVDALCKEGKVKEAKNVLAVMLKACVKPDVITYSTLM 311
Score = 37.0 bits (84), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 17/78 (21%), Positives = 37/78 (47%)
Query: 30 VVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYMLAYRTMV 89
++ N +L ++ + + + + +L+ I PD T +ILI FC + +
Sbjct: 59 IIQFNKILDSFAKIKHYSTAVSLSHRLELKGIQPDLITLNILINCFCHMGQITFGFSVLA 118
Query: 90 DMHRKGHQPEEELCSSLI 107
+ ++G+QP ++LI
Sbjct: 119 KILKRGYQPHTITFTTLI 136
>gi|255549482|ref|XP_002515794.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223545122|gb|EEF46633.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 924
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 31/156 (19%), Positives = 73/156 (46%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ A C+SG + + + A+ + + N ++ + R GD+ +M+++ +
Sbjct: 697 LLKACCKSGRMQSALAVTKEMSAQNIPRNTFVYNILIDGWARRGDVWEAADLMQQMKQGG 756
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ PD +T+ I CK + A + M +M G +P + ++LI + +AL
Sbjct: 757 VKPDIHTYTSFINACCKAGDMLRASKMMEEMETSGVKPNVKTYTTLIHGWARASLPEKAL 816
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLKDAYI 156
+ ++ + KA++ ++ L+S + +AY+
Sbjct: 817 RCFQEMKLAGLKPDKAVYHCLMTALLSRATVTEAYV 852
Score = 37.7 bits (86), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 28/117 (23%), Positives = 54/117 (46%)
Query: 27 KYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYMLAYR 86
K DVVL N+++ A+C G M+ + +++++ + P TF +I F + A
Sbjct: 548 KPDVVLYNNIIRAFCGMGTMDRAICMVKEMQKERHRPTSRTFMPIIHGFARAGEMKRALD 607
Query: 87 TMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVYNMLRYSKRSMCKALHEKILH 143
M R G P ++LI L + R +A+ + + + + S + + I+H
Sbjct: 608 VFDMMRRSGCIPTVHTFNALILGLVEKRQMEKAIEILDEMALAGVSPNEHTYTTIMH 664
>gi|218196467|gb|EEC78894.1| hypothetical protein OsI_19266 [Oryza sativa Indica Group]
gi|222630938|gb|EEE63070.1| hypothetical protein OsJ_17878 [Oryza sativa Japonica Group]
Length = 939
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 37/150 (24%), Positives = 71/150 (47%), Gaps = 8/150 (5%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
MI+ C+ G EE +++ + E + D N+++ YCR G M + R +
Sbjct: 365 MINGLCKLGRMEEVQKVLQEMEDVGMRPDKYSYNTLIDGYCREGSMRKAFEMCRMMVRNG 424
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
++ T++ L+K FC A R M ++G P E CS+L+ L K +AL
Sbjct: 425 LAATTLTYNTLLKGFCSLHAIDDALRLWFLMLKRGVAPNEISCSTLLDGLFKAGKTEQAL 484
Query: 121 SVYNMLRYSKRSMCKALHEKIL--HILISG 148
+++ K ++ + L + ++ + +I+G
Sbjct: 485 NLW------KETLARGLAKNVITFNTVING 508
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 43/82 (52%)
Query: 29 DVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYMLAYRTM 88
+++ NS++ C++G + +++ KL ISP+ T++ LI +CKE A++
Sbjct: 769 NIITYNSLIYGLCKSGKLSRAVNLFNKLQSKGISPNGITYNTLIDEYCKEGKTTEAFKLK 828
Query: 89 VDMHRKGHQPEEELCSSLIFHL 110
M +G QP S LI+ L
Sbjct: 829 QKMVEEGIQPTVITYSILIYGL 850
Score = 44.3 bits (103), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 23/95 (24%), Positives = 45/95 (47%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
M A+CR G + + + E + ++V ++++ YC G E ++ L
Sbjct: 224 MAKAYCRDGRVAQAVEFVEEMEGMGLEVNLVAYHAVMDCYCGMGWTEDARRILESLQRKG 283
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKG 95
+SP+ T+ +L+K +CK+ A R + +M G
Sbjct: 284 LSPNVVTYTLLVKGYCKDGRMEEAERVVKEMKETG 318
Score = 42.4 bits (98), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 25/107 (23%), Positives = 46/107 (42%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ ++G E+ L + A+ +V+ N+++ C+ G M ++ ++ EL
Sbjct: 470 LLDGLFKAGKTEQALNLWKETLARGLAKNVITFNTVINGLCKIGRMAEAEELLDRMKELR 529
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLI 107
PD T+ L +CK A M M G P E+ +S I
Sbjct: 530 CPPDSLTYRTLFDGYCKLGQLGTATHLMNKMEHLGFAPSVEMFNSFI 576
Score = 37.4 bits (85), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 19/78 (24%), Positives = 34/78 (43%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C+SG L ++K + + N+++ YC+ G + +K+ E
Sbjct: 776 LIYGLCKSGKLSRAVNLFNKLQSKGISPNGITYNTLIDEYCKEGKTTEAFKLKQKMVEEG 835
Query: 61 ISPDYNTFHILIKYFCKE 78
I P T+ ILI C +
Sbjct: 836 IQPTVITYSILIYGLCTQ 853
Score = 36.6 bits (83), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 22/108 (20%), Positives = 49/108 (45%), Gaps = 1/108 (0%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYD-KYDVVLLNSMLCAYCRTGDMESVMHVMRKLDEL 59
++ +C+ G EE +++ + + D D V M+ YC+ G M+ V ++ +
Sbjct: 294 LVKGYCKDGRMEEAERVVKEMKETGDIVVDEVAYGMMINGYCQRGRMDDATRVRNEMRDA 353
Query: 60 AISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLI 107
I + ++ +I CK + + +M G +P++ ++LI
Sbjct: 354 GIHVNLFVYNTMINGLCKLGRMEEVQKVLQEMEDVGMRPDKYSYNTLI 401
>gi|359481393|ref|XP_002276762.2| PREDICTED: pentatricopeptide repeat-containing protein
At2g32630-like [Vitis vinifera]
Length = 625
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 66/157 (42%), Gaps = 23/157 (14%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I +C SG +E +L E K + DV NS+ C+ + ++ + E
Sbjct: 406 LIDGYCESGMVDEALRLQVVMEKKGLESDVFAYNSIASGLCKLNRKDEAKGLLFSMVERG 465
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+SP+ +F LI +CKE ++ A R +M KG+ P +
Sbjct: 466 VSPNTMSFTTLIDIYCKEGNFVEAKRVFREMEEKGNVPN--------------------I 505
Query: 121 SVYNML--RYSKRSMCKALHEKILHILISGKLLKDAY 155
YN+L YSKR K H K+ L + L+ D Y
Sbjct: 506 ITYNVLIDGYSKRGNMKEAH-KLKDELENRGLIPDVY 541
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/127 (22%), Positives = 61/127 (48%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I +C+ G F E K++ + E K + +++ N ++ Y + G+M+ + +L+
Sbjct: 476 LIDIYCKEGNFVEAKRVFREMEEKGNVPNIITYNVLIDGYSKRGNMKEAHKLKDELENRG 535
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ PD T LI C + +A + +M ++G P +++I L K EA
Sbjct: 536 LIPDVYTCTSLIHGECIDGKVDMALKLFDEMPQRGLVPNVVTYTAMISGLSKDGRSEEAF 595
Query: 121 SVYNMLR 127
+Y+ ++
Sbjct: 596 KLYDEMK 602
Score = 39.3 bits (90), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 25/107 (23%), Positives = 50/107 (46%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I F G EE ++L + K + DV + S++ CR+G+++ + + ++ +
Sbjct: 301 LIHGFSNIGKIEEAQRLFEEMREKGIEADVYVYTSIISCNCRSGNVKRALVLFDEMTDKG 360
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLI 107
+ P +T+ LI CK A + +M KG + ++LI
Sbjct: 361 LIPSAHTYGALIHGVCKAGQMEAAQMLVNEMQGKGIDLNPVIFNTLI 407
Score = 39.3 bits (90), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 23/107 (21%), Positives = 49/107 (45%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+ S C+ +E K L + + + +++ YC+ G+ V R+++E
Sbjct: 441 IASGLCKLNRKDEAKGLLFSMVERGVSPNTMSFTTLIDIYCKEGNFVEAKRVFREMEEKG 500
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLI 107
P+ T+++LI + K A++ ++ +G P+ C+SLI
Sbjct: 501 NVPNIITYNVLIDGYSKRGNMKEAHKLKDELENRGLIPDVYTCTSLI 547
Score = 37.4 bits (85), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 22/110 (20%), Positives = 50/110 (45%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I + + G +E +L + E + DV S++ C G ++ + + ++ +
Sbjct: 511 LIDGYSKRGNMKEAHKLKDELENRGLIPDVYTCTSLIHGECIDGKVDMALKLFDEMPQRG 570
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHL 110
+ P+ T+ +I K+ A++ +M G P++ + SSL+ L
Sbjct: 571 LVPNVVTYTAMISGLSKDGRSEEAFKLYDEMKETGLTPDDTVYSSLVGSL 620
Score = 35.8 bits (81), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 29/119 (24%), Positives = 51/119 (42%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+IS CRSG + L + K +++ C+ G ME+ ++ ++
Sbjct: 336 IISCNCRSGNVKRALVLFDEMTDKGLIPSAHTYGALIHGVCKAGQMEAAQMLVNEMQGKG 395
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEA 119
I + F+ LI +C+ M A R V M +KG + + +S+ L K+ EA
Sbjct: 396 IDLNPVIFNTLIDGYCESGMVDEALRLQVVMEKKGLESDVFAYNSIASGLCKLNRKDEA 454
>gi|357441365|ref|XP_003590960.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355480008|gb|AES61211.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 590
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 61/118 (51%)
Query: 9 GCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTF 68
G +E ++L D K + + + ++++ A CR G ++ +V++ + E A++PD ++
Sbjct: 300 GKWEYGEKLMSDMLVKGCEPNPITYSTLITALCRDGKIDEAKNVLKVMKEKALAPDGYSY 359
Query: 69 HILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVYNML 126
LI C+E LA + DM GH P+ +S++ L K EAL+++ L
Sbjct: 360 DPLISALCREGKVDLAIEFLDDMISGGHLPDILSYNSILASLCKNGNADEALNIFEKL 417
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 26/107 (24%), Positives = 51/107 (47%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+ISA CR G + + D + D++ NS+L + C+ G+ + +++ KL E+
Sbjct: 362 LISALCREGKVDLAIEFLDDMISGGHLPDILSYNSILASLCKNGNADEALNIFEKLGEVG 421
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLI 107
P+ +++ L + A +++M G P+E +SLI
Sbjct: 422 CPPNAGSYNTLFGALWSSGDKIRALGMILEMLSNGIDPDEITYNSLI 468
Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 20/75 (26%), Positives = 37/75 (49%)
Query: 24 KYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYML 83
K+ K DV N+++ +C+ ++ V+ ++ + PD T++ILI FC L
Sbjct: 140 KHGKPDVFAYNAVISGFCKADRVDHASKVLDRMKKRGFEPDVVTYNILIGNFCGRGRLDL 199
Query: 84 AYRTMVDMHRKGHQP 98
A R M + + +P
Sbjct: 200 ALRVMDQLLKDNCKP 214
>gi|255585035|ref|XP_002533226.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223526958|gb|EEF29158.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 606
Score = 53.1 bits (126), Expect = 4e-05, Method: Composition-based stats.
Identities = 36/131 (27%), Positives = 58/131 (44%), Gaps = 1/131 (0%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKY-DVVLLNSMLCAYCRTGDMESVMHVMRKLDEL 59
+IS C+ G FEE L + E K D N+++ YCR G +E K+ E
Sbjct: 446 IISGLCKEGRFEEAFDLLAEMEEKNGLVPDQTTYNTIILGYCREGQVEKAFQFRNKMVEK 505
Query: 60 AISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEA 119
+ PD T +IL++ C+E M + A + KG + +++I L K EA
Sbjct: 506 SFKPDLFTCNILLRGLCREGMLVKALKLFNTWISKGKAIDAVTYNTIISGLCKEGRFEEA 565
Query: 120 LSVYNMLRYSK 130
+ ++ K
Sbjct: 566 FDLLAEMKEKK 576
Score = 45.8 bits (107), Expect = 0.006, Method: Composition-based stats.
Identities = 27/81 (33%), Positives = 38/81 (46%), Gaps = 1/81 (1%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRT-GDMESVMHVMRKLDEL 59
+IS C+ G FEE L + E K D N++LCA G +E K+ E
Sbjct: 340 IISGLCKEGRFEEAFDLLAEMEEKKLGPDCYTYNAILCALADAEGQVEKAFQFRNKMVEK 399
Query: 60 AISPDYNTFHILIKYFCKEKM 80
+ PD T +IL++ C E M
Sbjct: 400 SFKPDLFTCNILLRGLCTEGM 420
Score = 37.7 bits (86), Expect = 1.5, Method: Composition-based stats.
Identities = 23/99 (23%), Positives = 42/99 (42%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I +CR G E+ Q K K D+ N +L C G +++ + +
Sbjct: 270 IIHGYCREGQVEKAFQFRNKMVEKSFKPDLFTCNILLRGLCTEGMLDNALKLFNTWISKG 329
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPE 99
+ D T++ +I CKE + A+ + +M K P+
Sbjct: 330 KAIDAVTYNTIISGLCKEGRFEEAFDLLAEMEEKKLGPD 368
Score = 37.7 bits (86), Expect = 1.6, Method: Composition-based stats.
Identities = 24/99 (24%), Positives = 41/99 (41%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I +CR G E+ Q K K D+ N +L CR G + + +
Sbjct: 482 IILGYCREGQVEKAFQFRNKMVEKSFKPDLFTCNILLRGLCREGMLVKALKLFNTWISKG 541
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPE 99
+ D T++ +I CKE + A+ + +M K P+
Sbjct: 542 KAIDAVTYNTIISGLCKEGRFEEAFDLLAEMKEKKLGPD 580
Score = 37.0 bits (84), Expect = 2.6, Method: Composition-based stats.
Identities = 22/77 (28%), Positives = 38/77 (49%), Gaps = 2/77 (2%)
Query: 5 FCRSGCFEET-KQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISP 63
CRSG +++ +L E+ + + N+++ YCR G +E K+ E + P
Sbjct: 239 LCRSGKTDQSIDKLNELLESGLVPHQITY-NTIIHGYCREGQVEKAFQFRNKMVEKSFKP 297
Query: 64 DYNTFHILIKYFCKEKM 80
D T +IL++ C E M
Sbjct: 298 DLFTCNILLRGLCTEGM 314
>gi|449531171|ref|XP_004172561.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g59900-like [Cucumis sativus]
Length = 761
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 30/123 (24%), Positives = 60/123 (48%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C+ G +E ++L + +A DV+ S++ +CR+G + ++ ++ ++
Sbjct: 489 IIDGLCKCGREDEARELFKEMKALGVIPDVISYTSLIHGFCRSGKWKDAKYLFNEMVDIG 548
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ PD TF +LI CKE + A + M ++G P ++L+ L SEA
Sbjct: 549 VQPDVTTFSVLIDMLCKEGKVIEANELLEVMIQRGCIPNTVTYTTLVKGLCMNDRISEAT 608
Query: 121 SVY 123
++
Sbjct: 609 QLF 611
Score = 45.1 bits (105), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 24/110 (21%), Positives = 55/110 (50%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C+ +E ++L + +A+ DV+ +++ +C +G E + ++ ++
Sbjct: 308 IIDGLCKDRREDEARELFKEMKAQGIMPDVISYTTLIHGFCLSGKWEKAKCLFNEMLDVG 367
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHL 110
I PD T +LI CK+ + A + + + ++G P+ C++L+ L
Sbjct: 368 IQPDVTTSSVLIDMLCKKGKVIEANKLLEVVIQRGCIPDVVTCTTLVKGL 417
Score = 40.8 bits (94), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 19/78 (24%), Positives = 42/78 (53%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C+ G +E ++L + +A +V+ S++ +CR+G +E H+ ++ +
Sbjct: 670 IIDGLCKHGREDEARELFKEMKALGVIPNVISYTSLIHGFCRSGKLEDAKHLFNEMVDQG 729
Query: 61 ISPDYNTFHILIKYFCKE 78
+ + T+ ++I FCKE
Sbjct: 730 VQLNAVTYSVMIHGFCKE 747
Score = 39.7 bits (91), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 23/95 (24%), Positives = 46/95 (48%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C+ +E ++L + +A+ DV+ S++ +CR+G E + ++ ++
Sbjct: 127 IIDGLCKDRREDEARELFKEMKAQGMMPDVISYTSLIHGFCRSGKWEKAKCLFNEMLDVG 186
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKG 95
I D T +LI CKE + A + M ++G
Sbjct: 187 IRSDVTTSSMLIDILCKEGKVIEANELLEVMIQRG 221
Score = 36.6 bits (83), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 37/154 (24%), Positives = 66/154 (42%), Gaps = 1/154 (0%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I FCRSG +E+ K L + + DV + ++ C+ G + ++ + +
Sbjct: 162 LIHGFCRSGKWEKAKCLFNEMLDVGIRSDVTTSSMLIDILCKEGKVIEANELLEVMIQRG 221
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
D T+ LIK C + A R + M + G +P+ +L+ L + + AL
Sbjct: 222 CILDIVTYSTLIKGLCMKHRISEATRLFMSMQKLGCRPDAIAYGTLMKGLCQTGNINTAL 281
Query: 121 SVYN-MLRYSKRSMCKALHEKILHILISGKLLKD 153
++ ML + R K I + +I L KD
Sbjct: 282 QLHQEMLNDTGRYGIKCKPTLISYSIIIDGLCKD 315
>gi|449462483|ref|XP_004148970.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Cucumis sativus]
Length = 917
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 30/123 (24%), Positives = 60/123 (48%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C+ G +E ++L + +A DV+ S++ +CR+G + ++ ++ ++
Sbjct: 645 IIDGLCKCGREDEARELFKEMKALGVIPDVISYTSLIHGFCRSGKWKDAKYLFNEMVDIG 704
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ PD TF +LI CKE + A + M ++G P ++L+ L SEA
Sbjct: 705 VQPDVTTFSVLIDMLCKEGKVIEANELLEVMIQRGCIPNTVTYTTLVKGLCMNDRISEAT 764
Query: 121 SVY 123
++
Sbjct: 765 QLF 767
Score = 43.1 bits (100), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 24/95 (25%), Positives = 46/95 (48%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C+ +E ++L + +A+ DV+ S++ +C +G E + ++ ++
Sbjct: 171 IIDGLCKDRREDEARELFKEMKAQGMMPDVISYTSLIHGFCHSGKWEKAKCLFNEMLDVG 230
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKG 95
I PD T +LI FCKE + A + M +G
Sbjct: 231 IQPDVTTSGVLIDMFCKEGKVIEANELLEVMVHRG 265
Score = 40.8 bits (94), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 19/78 (24%), Positives = 42/78 (53%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C+ G +E ++L + +A +V+ S++ +CR+G +E H+ ++ +
Sbjct: 826 IIDGLCKHGREDEARELFKEMKALGVIPNVISYTSLIHGFCRSGKLEDAKHLFNEMVDQG 885
Query: 61 ISPDYNTFHILIKYFCKE 78
+ + T+ ++I FCKE
Sbjct: 886 VQLNAVTYSVMIHGFCKE 903
Score = 40.0 bits (92), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 23/110 (20%), Positives = 54/110 (49%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C+ +E ++L + +A+ DV+ +++ +C +G E + ++ ++
Sbjct: 464 IIDGLCKDRREDEARELFEEMKAQGIMPDVISYTTLIHGFCLSGKWEKAKCLFNEMLDVG 523
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHL 110
I PD T +LI CK+ + A + + + ++G + C++L+ L
Sbjct: 524 IQPDVTTSSVLIDMLCKKGKVIEANKLLEVVIQRGCILDVVTCTTLVKGL 573
>gi|218191860|gb|EEC74287.1| hypothetical protein OsI_09537 [Oryza sativa Indica Group]
Length = 689
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 29/107 (27%), Positives = 51/107 (47%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ C G +E L + + + + D V N+++ AYC+ GDM S + V R++ E
Sbjct: 418 ILRKLCEDGKMKEVNVLLNEMDERKVQADHVTCNTLINAYCKRGDMTSALKVKRRMMESG 477
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLI 107
+ D T+ L+ FCK K A + +M G P + S ++
Sbjct: 478 LQLDQFTYKALVHGFCKAKELDEAKEALFEMMGAGFSPNYSVLSWIV 524
Score = 40.0 bits (92), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 27/117 (23%), Positives = 55/117 (47%), Gaps = 3/117 (2%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ +CR G E + E + K DVV NS++ C+ ++ ++R++
Sbjct: 313 VIALYCRKGMQYEAMCVRERMENQGVKADVVTWNSLIHGLCKERRVKEASQLLREMAMAG 372
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHL---GKMR 114
++PD+ T+ L+ +C+ A + +M G P ++++ L GKM+
Sbjct: 373 VAPDHVTYTTLVDGYCRAGDLEEAVKLRGEMEAMGMLPGVATYNAILRKLCEDGKMK 429
Score = 36.2 bits (82), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 19/75 (25%), Positives = 36/75 (48%)
Query: 33 LNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYMLAYRTMVDMH 92
N+++ YCR G M V +++ + D T++ LI CKE+ A + + +M
Sbjct: 310 FNTVIALYCRKGMQYEAMCVRERMENQGVKADVVTWNSLIHGLCKERRVKEASQLLREMA 369
Query: 93 RKGHQPEEELCSSLI 107
G P+ ++L+
Sbjct: 370 MAGVAPDHVTYTTLV 384
>gi|224103707|ref|XP_002313163.1| predicted protein [Populus trichocarpa]
gi|222849571|gb|EEE87118.1| predicted protein [Populus trichocarpa]
Length = 643
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 28/114 (24%), Positives = 59/114 (51%)
Query: 7 RSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYN 66
+S FE ++++ + AK K D++ N+++ AYCR G M+ H+ ++ E + PD
Sbjct: 501 QSENFERSEEVLKEILAKGIKPDIISYNTVIFAYCRNGRMKEASHIFSEMRESGLIPDVI 560
Query: 67 TFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
T++ + + + M+ A + M + G +P + +S+I K+ +A+
Sbjct: 561 TYNTFVASYAADSMFEEAIDVVCYMIKHGCKPNQNTYNSVIDGYCKLNRRDDAI 614
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 36/73 (49%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+ISA+ R G EE +L + K DV +ML + RTG ES M V ++
Sbjct: 180 LISAYARDGLLEEAMELKNQMVERGIKLDVFTYTAMLSGFVRTGKDESAMRVFEEMRTAG 239
Query: 61 ISPDYNTFHILIK 73
P+ TF+ LIK
Sbjct: 240 CKPNICTFNALIK 252
Score = 42.4 bits (98), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 27/119 (22%), Positives = 59/119 (49%), Gaps = 13/119 (10%)
Query: 8 SGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNT 67
SG F+E K++ F + D Y N+++ AY R G + M + +++ + I+PD +T
Sbjct: 299 SGVFKEMKRVG--FVPERDTY-----NTLISAYSRCGSFDQAMAMYKRMLDTGITPDLST 351
Query: 68 FHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIF------HLGKMRAHSEAL 120
++ ++ + ++ + + + +M +P E SL+ +G+M A +E +
Sbjct: 352 YNAVLAALARGGLWEQSEKILAEMQDGMCKPNELTHCSLLHAYANGKEIGRMLALAEEI 410
Score = 36.2 bits (82), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 27/127 (21%), Positives = 55/127 (43%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ + +S +E ++ + E +V NS++ AY R G +E M + ++ E
Sbjct: 145 LLDVYGKSRRIKEAIEVLREMEVNGCSPSIVTYNSLISAYARDGLLEEAMELKNQMVERG 204
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
I D T+ ++ F + A R +M G +P ++LI G +E +
Sbjct: 205 IKLDVFTYTAMLSGFVRTGKDESAMRVFEEMRTAGCKPNICTFNALIKMHGNRGKFAEMM 264
Query: 121 SVYNMLR 127
V+ ++
Sbjct: 265 KVFEEIK 271
>gi|50878351|gb|AAT85126.1| hypothetical protein [Oryza sativa Japonica Group]
Length = 920
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 37/150 (24%), Positives = 71/150 (47%), Gaps = 8/150 (5%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
MI+ C+ G EE +++ + E + D N+++ YCR G M + R +
Sbjct: 365 MINGLCKLGRMEEVQKVLQEMEDVGMRPDKYSYNTLIDGYCREGSMRKAFEMCRMMVRNG 424
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
++ T++ L+K FC A R M ++G P E CS+L+ L K +AL
Sbjct: 425 LAATTLTYNTLLKGFCSLHAIDDALRLWFLMLKRGVAPNEISCSTLLDGLFKAGKTEQAL 484
Query: 121 SVYNMLRYSKRSMCKALHEKIL--HILISG 148
+++ K ++ + L + ++ + +I+G
Sbjct: 485 NLW------KETLARGLAKNVITFNTVING 508
Score = 44.3 bits (103), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 23/95 (24%), Positives = 45/95 (47%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
M A+CR G + + + E + ++V ++++ YC G E ++ L
Sbjct: 224 MAKAYCRDGRVAQAVEFVEEMEGMGLEVNLVAYHAVMDCYCGMGWTEDARRILESLQRKG 283
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKG 95
+SP+ T+ +L+K +CK+ A R + +M G
Sbjct: 284 LSPNVVTYTLLVKGYCKDGRMEEAERVVKEMKETG 318
Score = 42.4 bits (98), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 25/107 (23%), Positives = 46/107 (42%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ ++G E+ L + A+ +V+ N+++ C+ G M ++ ++ EL
Sbjct: 470 LLDGLFKAGKTEQALNLWKETLARGLAKNVITFNTVINGLCKIGRMAEAEELLDRMKELR 529
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLI 107
PD T+ L +CK A M M G P E+ +S I
Sbjct: 530 CPPDSLTYRTLFDGYCKLGQLGTATHLMNKMEHLGFAPSVEMFNSFI 576
Score = 42.4 bits (98), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 19/71 (26%), Positives = 38/71 (53%)
Query: 29 DVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYMLAYRTM 88
+++ NS++ C++G + +++ KL ISP+ T++ LI +CKE A++
Sbjct: 769 NIITYNSLIYGLCKSGKLSRAVNLFNKLQSKGISPNGITYNTLIDEYCKEGKTTEAFKLK 828
Query: 89 VDMHRKGHQPE 99
M +G+ E
Sbjct: 829 QKMVEEGYMEE 839
Score = 36.6 bits (83), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 22/108 (20%), Positives = 49/108 (45%), Gaps = 1/108 (0%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYD-KYDVVLLNSMLCAYCRTGDMESVMHVMRKLDEL 59
++ +C+ G EE +++ + + D D V M+ YC+ G M+ V ++ +
Sbjct: 294 LVKGYCKDGRMEEAERVVKEMKETGDIVVDEVAYGMMINGYCQRGRMDDATRVRNEMRDA 353
Query: 60 AISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLI 107
I + ++ +I CK + + +M G +P++ ++LI
Sbjct: 354 GIHVNLFVYNTMINGLCKLGRMEEVQKVLQEMEDVGMRPDKYSYNTLI 401
>gi|449505568|ref|XP_004162510.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22670,
mitochondrial-like [Cucumis sativus]
Length = 614
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 31/112 (27%), Positives = 56/112 (50%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I +C++ +E ++ G+ E + DV+ + + A+CR D +V V+ +++
Sbjct: 340 LIHGYCKAKKLDEAWKIMGEVEKSGLEPDVISYTAFIEAHCREKDFRNVDKVLVQMEHKG 399
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGK 112
P+ TF I++ K K A + M ++G P+ SSLIF LGK
Sbjct: 400 CKPNVITFTIIMHALGKAKQINEALKVYEKMKKEGCVPDSSFYSSLIFILGK 451
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/132 (21%), Positives = 63/132 (47%)
Query: 28 YDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYMLAYRT 87
+++ N ++ YC+ ++ +M ++++ + PD ++ I+ C+EK + +
Sbjct: 332 FNLASFNVLIHGYCKAKKLDEAWKIMGEVEKSGLEPDVISYTAFIEAHCREKDFRNVDKV 391
Query: 88 MVDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVYNMLRYSKRSMCKALHEKILHILIS 147
+V M KG +P + ++ LGK + +EAL VY ++ + + ++ IL
Sbjct: 392 LVQMEHKGCKPNVITFTIIMHALGKAKQINEALKVYEKMKKEGCVPDSSFYSSLIFILGK 451
Query: 148 GKLLKDAYIVVK 159
L D +V+
Sbjct: 452 AGRLTDVKEIVE 463
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/79 (26%), Positives = 44/79 (55%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I ++G + K++ D E + DV+ N+++ C E+ + ++ K++E++
Sbjct: 445 LIFILGKAGRLTDVKEIVEDMEKQGVTPDVLTYNTLISCACAHSQEETALTLLLKMEEVS 504
Query: 61 ISPDYNTFHILIKYFCKEK 79
PD T+H L+K FC++K
Sbjct: 505 CKPDLKTYHPLLKMFCRKK 523
>gi|449442128|ref|XP_004138834.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22670,
mitochondrial-like [Cucumis sativus]
Length = 591
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 31/112 (27%), Positives = 56/112 (50%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I +C++ +E ++ G+ E + DV+ + + A+CR D +V V+ +++
Sbjct: 317 LIHGYCKAKKLDEAWKIMGEVEKSGLEPDVISYTAFIEAHCREKDFRNVDKVLVQMEHKG 376
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGK 112
P+ TF I++ K K A + M ++G P+ SSLIF LGK
Sbjct: 377 CKPNVITFTIIMHALGKAKQINEALKVYEKMKKEGCVPDSSFYSSLIFILGK 428
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/132 (21%), Positives = 63/132 (47%)
Query: 28 YDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYMLAYRT 87
+++ N ++ YC+ ++ +M ++++ + PD ++ I+ C+EK + +
Sbjct: 309 FNLASFNVLIHGYCKAKKLDEAWKIMGEVEKSGLEPDVISYTAFIEAHCREKDFRNVDKV 368
Query: 88 MVDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVYNMLRYSKRSMCKALHEKILHILIS 147
+V M KG +P + ++ LGK + +EAL VY ++ + + ++ IL
Sbjct: 369 LVQMEHKGCKPNVITFTIIMHALGKAKQINEALKVYEKMKKEGCVPDSSFYSSLIFILGK 428
Query: 148 GKLLKDAYIVVK 159
L D +V+
Sbjct: 429 AGRLTDVKEIVE 440
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/79 (26%), Positives = 44/79 (55%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I ++G + K++ D E + DV+ N+++ C E+ + ++ K++E++
Sbjct: 422 LIFILGKAGRLTDVKEIVEDMEKQGVTPDVLTYNTLISCACAHSQEETALTLLLKMEEVS 481
Query: 61 ISPDYNTFHILIKYFCKEK 79
PD T+H L+K FC++K
Sbjct: 482 CKPDLKTYHPLLKMFCRKK 500
>gi|38567720|emb|CAE76009.1| B1358B12.18 [Oryza sativa Japonica Group]
gi|90265197|emb|CAH67636.1| B0812A04.6 [Oryza sativa Indica Group]
Length = 609
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 25/107 (23%), Positives = 55/107 (51%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I CR G E+ + + + K + V+ ++ A+C+ GD E+++ + R++ E
Sbjct: 316 LIQGLCRVGRIEDARGVFEKMCGRGMKPNAVVFTILIDAHCKKGDAETMLELHREMRERG 375
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLI 107
+ PD T++ ++ C+ + A +V+M G +P+ ++LI
Sbjct: 376 VRPDAVTYNAIVNGLCRARDLKSASGIVVEMRSAGLRPDTVTYTTLI 422
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 42/77 (54%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I AFCR G + +L + + K K VV N ++ +C+ G M++ ++ + +
Sbjct: 491 VIDAFCRKGDVKTGLRLLKEMQNKGRKPGVVTYNVIMNGFCKLGQMKNADMLLNAMINIG 550
Query: 61 ISPDYNTFHILIKYFCK 77
+SPD T++IL+ CK
Sbjct: 551 VSPDDITYNILLDGHCK 567
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/119 (25%), Positives = 57/119 (47%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I A C+ G E +L + + + D V N+++ CR D++S ++ ++
Sbjct: 351 LIDAHCKKGDAETMLELHREMRERGVRPDAVTYNAIVNGLCRARDLKSASGIVVEMRSAG 410
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEA 119
+ PD T+ LI +CKE+ +A +M +G +E ++LI L K ++A
Sbjct: 411 LRPDTVTYTTLIDGYCKEEELDMAMEIKQNMVAEGVGLDEVTYTALISGLSKAGRSADA 469
Score = 45.8 bits (107), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/103 (23%), Positives = 47/103 (45%)
Query: 5 FCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPD 64
R G + + + +++ + VV N+M+ CR GD++ + R++ E ++PD
Sbjct: 250 LVRLGELASAQNVFDEMQSRGVRRTVVSFNTMISGMCRAGDLDGAETLHRRMSEAGVTPD 309
Query: 65 YNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLI 107
T+ LI+ C+ A M +G +P + + LI
Sbjct: 310 VYTYGALIQGLCRVGRIEDARGVFEKMCGRGMKPNAVVFTILI 352
Score = 42.7 bits (99), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 32/133 (24%), Positives = 57/133 (42%), Gaps = 8/133 (6%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
MIS CR+G + + L DV +++ CR G +E V K+
Sbjct: 281 MISGMCRAGDLDGAETLHRRMSEAGVTPDVYTYGALIQGLCRVGRIEDARGVFEKMCGRG 340
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHR----KGHQPEEELCSSLIFHLGKMRAH 116
+ P+ F ILI CK+ TM+++HR +G +P+ ++++ L + R
Sbjct: 341 MKPNAVVFTILIDAHCKKG----DAETMLELHREMRERGVRPDAVTYNAIVNGLCRARDL 396
Query: 117 SEALSVYNMLRYS 129
A + +R +
Sbjct: 397 KSASGIVVEMRSA 409
Score = 39.7 bits (91), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 19/98 (19%), Positives = 43/98 (43%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I +C+ + ++ + A+ D V +++ + G V+ ++ E
Sbjct: 421 LIDGYCKEEELDMAMEIKQNMVAEGVGLDEVTYTALISGLSKAGRSADAERVLGEMMEAG 480
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQP 98
+ PD T+ ++I FC++ R + +M KG +P
Sbjct: 481 LEPDNTTYTMVIDAFCRKGDVKTGLRLLKEMQNKGRKP 518
Score = 37.4 bits (85), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 15/77 (19%), Positives = 41/77 (53%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+IS ++G + +++ G+ + D ++ A+CR GD+++ + +++++
Sbjct: 456 LISGLSKAGRSADAERVLGEMMEAGLEPDNTTYTMVIDAFCRKGDVKTGLRLLKEMQNKG 515
Query: 61 ISPDYNTFHILIKYFCK 77
P T+++++ FCK
Sbjct: 516 RKPGVVTYNVIMNGFCK 532
>gi|357124917|ref|XP_003564143.1| PREDICTED: pentatricopeptide repeat-containing protein At3g18110,
chloroplastic-like [Brachypodium distachyon]
Length = 1285
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 31/144 (21%), Positives = 70/144 (48%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
MIS CR+ + + + + + E + D+ +LN++L Y G+ + + V + E
Sbjct: 735 MISLLCRNKRYRDVELMVVEMERAGFEPDLTILNTLLLMYTGNGNFDKTVEVYHSILEAG 794
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ P+ +T++ LI + + + + +M +KG P+ E SL+ GK + +A
Sbjct: 795 LEPNEDTYNTLIVMYSRNLRPEEGFTLLNEMGKKGLTPKLESYKSLLAASGKAKLWEQAE 854
Query: 121 SVYNMLRYSKRSMCKALHEKILHI 144
++ +R + ++L+ ++ I
Sbjct: 855 QLFEEIRSKGYRLNRSLYHMLMKI 878
Score = 43.1 bits (100), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 35/122 (28%), Positives = 56/122 (45%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
M+S R G ++ +++ + K K D V NS+L A+ + GD ++V V +L
Sbjct: 176 MVSVHGRCGKAQDAERMFRELVEKGFKPDAVTYNSLLYAFAKEGDADTVERVCEELVRAG 235
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
D T++ +I + K LA +M G P+ + LI LGKM S+A
Sbjct: 236 FKKDGITYNTMIHMYGKMGRLDLALGLYDEMRALGCTPDAVTYTVLIDSLGKMDRISDAG 295
Query: 121 SV 122
V
Sbjct: 296 KV 297
Score = 42.0 bits (97), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 24/89 (26%), Positives = 43/89 (48%), Gaps = 3/89 (3%)
Query: 20 DFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEK 79
D K K V+L ML A+ + GD+ VM + + E P+ + + +I C+ K
Sbjct: 687 DMGFKISKSTVIL---MLDAFTKAGDIFEVMKIYNGMKEAGYLPNMHIYRSMISLLCRNK 743
Query: 80 MYMLAYRTMVDMHRKGHQPEEELCSSLIF 108
Y +V+M R G +P+ + ++L+
Sbjct: 744 RYRDVELMVVEMERAGFEPDLTILNTLLL 772
Score = 38.5 bits (88), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 30/127 (23%), Positives = 57/127 (44%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+ISA + ++ + + A + D+ N+M+ + R G + + R+L E
Sbjct: 141 LISACSQGSNLDDAVAVFEEMMASECRPDLWTYNAMVSVHGRCGKAQDAERMFRELVEKG 200
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
PD T++ L+ F KE R ++ R G + + +++I GKM AL
Sbjct: 201 FKPDAVTYNSLLYAFAKEGDADTVERVCEELVRAGFKKDGITYNTMIHMYGKMGRLDLAL 260
Query: 121 SVYNMLR 127
+Y+ +R
Sbjct: 261 GLYDEMR 267
>gi|334185431|ref|NP_188439.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|322510063|sp|Q5G1S8.2|PP241_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g18110,
chloroplastic; AltName: Full=Protein EMBRYO DEFECTIVE
1270; Flags: Precursor
gi|9294066|dbj|BAB02023.1| unnamed protein product [Arabidopsis thaliana]
gi|332642528|gb|AEE76049.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 1440
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 36/161 (22%), Positives = 69/161 (42%), Gaps = 16/161 (9%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
MI C+ + + + + E K ++ + NSML Y D + + V +++ E
Sbjct: 898 MIELLCKGKRVRDAEIMVSEMEEANFKVELAIWNSMLKMYTAIEDYKKTVQVYQRIKETG 957
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ PD T++ LI +C+++ Y M M G P+ + SLI GK + +A
Sbjct: 958 LEPDETTYNTLIIMYCRDRRPEEGYLLMQQMRNLGLDPKLDTYKSLISAFGKQKCLEQAE 1017
Query: 121 SVY----------------NMLRYSKRSMCKALHEKILHIL 145
++ M++ S+ S + EK+L ++
Sbjct: 1018 QLFEELLSKGLKLDRSFYHTMMKISRDSGSDSKAEKLLQMM 1058
Score = 48.5 bits (114), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 58/123 (47%), Gaps = 1/123 (0%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
MIS + R G E ++L + E K D V NS+L A+ R + E V V +++ ++
Sbjct: 338 MISVYGRCGLAAEAERLFMELELKGFFPDAVTYNSLLYAFARERNTEKVKEVYQQMQKMG 397
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHR-KGHQPEEELCSSLIFHLGKMRAHSEA 119
D T++ +I + K+ LA + DM G P+ + LI LGK EA
Sbjct: 398 FGKDEMTYNTIIHMYGKQGQLDLALQLYKDMKGLSGRNPDAITYTVLIDSLGKANRTVEA 457
Query: 120 LSV 122
++
Sbjct: 458 AAL 460
Score = 37.4 bits (85), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 20/101 (19%), Positives = 47/101 (46%)
Query: 27 KYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYMLAYR 86
+ D + N++L A R +++ + V ++ PD T++ +I + + + A R
Sbjct: 294 RPDAITYNTLLSACSRDSNLDGAVKVFEDMEAHRCQPDLWTYNAMISVYGRCGLAAEAER 353
Query: 87 TMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVYNMLR 127
+++ KG P+ +SL++ + R + VY ++
Sbjct: 354 LFMELELKGFFPDAVTYNSLLYAFARERNTEKVKEVYQQMQ 394
>gi|356577033|ref|XP_003556634.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g39710-like [Glycine max]
Length = 757
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 28/107 (26%), Positives = 52/107 (48%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I FC+ G E ++ + VV N+++ YC G ++ + ++R + E
Sbjct: 388 LIDGFCQKGLMNEAYKVLSEMIVSGFSPSVVTYNALVHGYCFLGRVQEAVGILRGMVERG 447
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLI 107
+ PD ++ +I FC+E+ A++ +M KG P+ SSLI
Sbjct: 448 LPPDVVSYSTVIAGFCRERELGKAFQMKEEMVEKGVLPDTVTYSSLI 494
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 25/107 (23%), Positives = 48/107 (44%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ C G E +L + K D V N+++ +C+ G++ + ++ ++
Sbjct: 283 VINGLCGKGRMSEVGELVEEMRGKGLVPDEVTYNTLVNGFCKEGNLHQGLVLLSEMVGKG 342
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLI 107
+SP+ T+ LI CK A M +G +P E ++LI
Sbjct: 343 LSPNVVTYTTLINCMCKAGNLSRAVEIFDQMRVRGLRPNERTYTTLI 389
Score = 42.7 bits (99), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 24/107 (22%), Positives = 51/107 (47%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ +C G +E + + DVV ++++ +CR ++ + ++ E
Sbjct: 423 LVHGYCFLGRVQEAVGILRGMVERGLPPDVVSYSTVIAGFCRERELGKAFQMKEEMVEKG 482
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLI 107
+ PD T+ LI+ C ++ + A+ +M R+G P+E +SLI
Sbjct: 483 VLPDTVTYSSLIQGLCLQQKLVEAFDLFREMMRRGLPPDEVTYTSLI 529
Score = 42.0 bits (97), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 38/162 (23%), Positives = 70/162 (43%), Gaps = 8/162 (4%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I A C+ +E L +++ NS++ C G M V ++ ++
Sbjct: 248 LIDASCKKKKVKEAMALLRAMAVGGVAANLISYNSVINGLCGKGRMSEVGELVEEMRGKG 307
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ PD T++ L+ FCKE + +M KG P ++LI + K S A+
Sbjct: 308 LVPDEVTYNTLVNGFCKEGNLHQGLVLLSEMVGKGLSPNVVTYTTLINCMCKAGNLSRAV 367
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISG----KLLKDAYIVV 158
+++ +R R + +E+ LI G L+ +AY V+
Sbjct: 368 EIFDQMRV--RGLRP--NERTYTTLIDGFCQKGLMNEAYKVL 405
>gi|125548610|gb|EAY94432.1| hypothetical protein OsI_16202 [Oryza sativa Indica Group]
gi|125590647|gb|EAZ30997.1| hypothetical protein OsJ_15079 [Oryza sativa Japonica Group]
Length = 485
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 25/107 (23%), Positives = 55/107 (51%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I CR G E+ + + + K + V+ ++ A+C+ GD E+++ + R++ E
Sbjct: 192 LIQGLCRVGRIEDARGVFEKMCGRGMKPNAVVFTILIDAHCKKGDAETMLELHREMRERG 251
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLI 107
+ PD T++ ++ C+ + A +V+M G +P+ ++LI
Sbjct: 252 VRPDAVTYNAIVNGLCRARDLKSASGIVVEMRSAGLRPDTVTYTTLI 298
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 42/77 (54%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I AFCR G + +L + + K K VV N ++ +C+ G M++ ++ + +
Sbjct: 367 VIDAFCRKGDVKTGLRLLKEMQNKGRKPGVVTYNVIMNGFCKLGQMKNADMLLNAMINIG 426
Query: 61 ISPDYNTFHILIKYFCK 77
+SPD T++IL+ CK
Sbjct: 427 VSPDDITYNILLDGHCK 443
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/122 (25%), Positives = 58/122 (47%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I A C+ G E +L + + + D V N+++ CR D++S ++ ++
Sbjct: 227 LIDAHCKKGDAETMLELHREMRERGVRPDAVTYNAIVNGLCRARDLKSASGIVVEMRSAG 286
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ PD T+ LI +CKE+ +A +M +G +E ++LI L K ++A
Sbjct: 287 LRPDTVTYTTLIDGYCKEEELDMAMEIKQNMVAEGVGLDEVTYTALISGLSKAGRSADAE 346
Query: 121 SV 122
V
Sbjct: 347 RV 348
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 24/103 (23%), Positives = 47/103 (45%)
Query: 5 FCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPD 64
R G + + + +++ + VV N+M+ CR GD++ + R++ E ++PD
Sbjct: 126 LVRLGELASAQNVFDEMQSRGVRRTVVSFNTMISGMCRAGDLDGAETLHRRMSEAGVTPD 185
Query: 65 YNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLI 107
T+ LI+ C+ A M +G +P + + LI
Sbjct: 186 VYTYGALIQGLCRVGRIEDARGVFEKMCGRGMKPNAVVFTILI 228
Score = 43.1 bits (100), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 32/133 (24%), Positives = 57/133 (42%), Gaps = 8/133 (6%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
MIS CR+G + + L DV +++ CR G +E V K+
Sbjct: 157 MISGMCRAGDLDGAETLHRRMSEAGVTPDVYTYGALIQGLCRVGRIEDARGVFEKMCGRG 216
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHR----KGHQPEEELCSSLIFHLGKMRAH 116
+ P+ F ILI CK+ TM+++HR +G +P+ ++++ L + R
Sbjct: 217 MKPNAVVFTILIDAHCKKG----DAETMLELHREMRERGVRPDAVTYNAIVNGLCRARDL 272
Query: 117 SEALSVYNMLRYS 129
A + +R +
Sbjct: 273 KSASGIVVEMRSA 285
Score = 39.7 bits (91), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 19/98 (19%), Positives = 43/98 (43%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I +C+ + ++ + A+ D V +++ + G V+ ++ E
Sbjct: 297 LIDGYCKEEELDMAMEIKQNMVAEGVGLDEVTYTALISGLSKAGRSADAERVLGEMMEAG 356
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQP 98
+ PD T+ ++I FC++ R + +M KG +P
Sbjct: 357 LEPDNTTYTMVIDAFCRKGDVKTGLRLLKEMQNKGRKP 394
Score = 37.4 bits (85), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 15/77 (19%), Positives = 41/77 (53%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+IS ++G + +++ G+ + D ++ A+CR GD+++ + +++++
Sbjct: 332 LISGLSKAGRSADAERVLGEMMEAGLEPDNTTYTMVIDAFCRKGDVKTGLRLLKEMQNKG 391
Query: 61 ISPDYNTFHILIKYFCK 77
P T+++++ FCK
Sbjct: 392 RKPGVVTYNVIMNGFCK 408
>gi|58013026|gb|AAW62966.1| chloroplast embryo-defective 1270 [Arabidopsis thaliana]
Length = 1429
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 36/161 (22%), Positives = 69/161 (42%), Gaps = 16/161 (9%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
MI C+ + + + + E K ++ + NSML Y D + + V +++ E
Sbjct: 898 MIELLCKGKRVRDAEIMVSEMEEANFKVELAIWNSMLKMYTAIEDYKKTVQVYQRIKETG 957
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ PD T++ LI +C+++ Y M M G P+ + SLI GK + +A
Sbjct: 958 LEPDETTYNTLIIMYCRDRRPEEGYLLMQQMRNLGLDPKLDTYKSLISAFGKQKCLEQAE 1017
Query: 121 SVY----------------NMLRYSKRSMCKALHEKILHIL 145
++ M++ S+ S + EK+L ++
Sbjct: 1018 QLFEELLSKGLKLDRSFYHTMMKISRDSGSDSKAEKLLQMM 1058
Score = 48.5 bits (114), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 58/123 (47%), Gaps = 1/123 (0%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
MIS + R G E ++L + E K D V NS+L A+ R + E V V +++ ++
Sbjct: 338 MISVYGRCGLAAEAERLFMELELKGFFPDAVTYNSLLYAFARERNTEKVKEVYQQMQKMG 397
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHR-KGHQPEEELCSSLIFHLGKMRAHSEA 119
D T++ +I + K+ LA + DM G P+ + LI LGK EA
Sbjct: 398 FGKDEMTYNTIIHMYGKQGQLDLALQLYKDMKGLSGRNPDAITYTVLIDSLGKANRTVEA 457
Query: 120 LSV 122
++
Sbjct: 458 AAL 460
Score = 37.4 bits (85), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 20/101 (19%), Positives = 47/101 (46%)
Query: 27 KYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYMLAYR 86
+ D + N++L A R +++ + V ++ PD T++ +I + + + A R
Sbjct: 294 RPDAITYNTLLSACSRDSNLDGAVKVFEDMEAHRCQPDLWTYNAMISVYGRCGLAAEAER 353
Query: 87 TMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVYNMLR 127
+++ KG P+ +SL++ + R + VY ++
Sbjct: 354 LFMELELKGFFPDAVTYNSLLYAFARERNTEKVKEVYQQMQ 394
>gi|115470153|ref|NP_001058675.1| Os07g0101200 [Oryza sativa Japonica Group]
gi|50508922|dbj|BAD31827.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
gi|113610211|dbj|BAF20589.1| Os07g0101200 [Oryza sativa Japonica Group]
Length = 738
Score = 52.8 bits (125), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 52/107 (48%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ C G E +L + +AK K D+V+ NS++ C G + + VM ++ E
Sbjct: 334 LINGLCAEGDVERALELFNEAQAKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEG 393
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLI 107
PD T++I+I CK A M D KG+ P+ ++LI
Sbjct: 394 CHPDIQTYNIVINGLCKMGNISDATVVMNDAIMKGYLPDVFTFNTLI 440
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 49/99 (49%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I FCRS EE ++ + D V N+++ +CR GD+E + +KL+E
Sbjct: 509 LIENFCRSNKMEEASKVIVKMSQEGLHPDAVSFNTLIYGFCRNGDLEGAYLLFQKLEEKG 568
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPE 99
S +TF+ LI F + +A + +M KGH+ +
Sbjct: 569 YSATADTFNTLIGAFSGKLNMHMAEKIFDEMLSKGHRAD 607
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 32/124 (25%), Positives = 57/124 (45%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I +C+ +E +L D K D V S++ C GD+E + + +
Sbjct: 299 IIDGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLINGLCAEGDVERALELFNEAQAKG 358
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
I PD ++ L+K C + + + A + M +M +G P+ + + +I L KM S+A
Sbjct: 359 IKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYNIVINGLCKMGNISDAT 418
Query: 121 SVYN 124
V N
Sbjct: 419 VVMN 422
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/123 (27%), Positives = 53/123 (43%), Gaps = 1/123 (0%)
Query: 2 ISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAI 61
I C +G E +L A Y DVV N+++ C+ + MH +R++
Sbjct: 231 IRGLCEAGRLPEAVRLVDGMRA-YAVPDVVTYNTLIRGLCKKSMPQEAMHYLRRMMNQGC 289
Query: 62 SPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEALS 121
PD T++ +I +CK M A + D KG P++ SLI L AL
Sbjct: 290 LPDDFTYNTIIDGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLINGLCAEGDVERALE 349
Query: 122 VYN 124
++N
Sbjct: 350 LFN 352
Score = 44.3 bits (103), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 33/145 (22%), Positives = 61/145 (42%), Gaps = 17/145 (11%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ C+ G + + D K DV N+++ YC+ ++S + ++ ++ E
Sbjct: 404 VINGLCKMGNISDATVVMNDAIMKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWEYG 463
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPE--------EELC--------S 104
I+PD T++ ++ CK T +M KG P E C S
Sbjct: 464 IAPDTITYNSVLNGLCKAGKVNEVNETFQEMILKGCHPNPITYNILIENFCRSNKMEEAS 523
Query: 105 SLIFHLGKMRAHSEALSVYNMLRYS 129
+I + + H +A+S +N L Y
Sbjct: 524 KVIVKMSQEGLHPDAVS-FNTLIYG 547
Score = 43.9 bits (102), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 27/117 (23%), Positives = 53/117 (45%), Gaps = 1/117 (0%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+++ C++G E + + K + + N ++ +CR+ ME V+ K+ +
Sbjct: 474 VLNGLCKAGKVNEVNETFQEMILKGCHPNPITYNILIENFCRSNKMEEASKVIVKMSQEG 533
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHL-GKMRAH 116
+ PD +F+ LI FC+ AY + KG+ + ++LI GK+ H
Sbjct: 534 LHPDAVSFNTLIYGFCRNGDLEGAYLLFQKLEEKGYSATADTFNTLIGAFSGKLNMH 590
>gi|357499659|ref|XP_003620118.1| Pentatricopeptide repeat protein-like protein [Medicago truncatula]
gi|355495133|gb|AES76336.1| Pentatricopeptide repeat protein-like protein [Medicago truncatula]
Length = 841
Score = 52.8 bits (125), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 34/128 (26%), Positives = 60/128 (46%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ FC+ G +E K + + K DVV +S++ YC ++ + +
Sbjct: 409 LVDGFCKDGNIKEAKNVLAMMMKQSIKPDVVTYSSLMDGYCLVNEVNKAESIFNTMSHRG 468
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
++ + +++I+I FCK KM A + +MH K P+ SSLI L K S AL
Sbjct: 469 VTANVQSYNIMINGFCKIKMVDEAMKLFKEMHHKQIFPDVITYSSLIDGLCKSGRISYAL 528
Query: 121 SVYNMLRY 128
+ + + Y
Sbjct: 529 ELVDEMHY 536
Score = 48.9 bits (115), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 26/97 (26%), Positives = 47/97 (48%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C+SG +L + + + D++ NS+L A C+ ++ + ++ KL
Sbjct: 514 LIDGLCKSGRISYALELVDEMHYRGQQPDIITYNSILDALCKKHHVDKAITLLTKLKGQG 573
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQ 97
I PD NT+ IL+K C+ A + D+ KG+
Sbjct: 574 IRPDMNTYTILVKGLCQSGKLEDARKVFEDLLVKGYN 610
Score = 44.3 bits (103), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 25/100 (25%), Positives = 49/100 (49%)
Query: 29 DVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYMLAYRTM 88
DV N+++ +C G ++ + + K+ I PD TF IL+ FCK+ A +
Sbjct: 367 DVFTYNALISGFCIVGKLKDAIDLFNKMTSKNIIPDVYTFSILVDGFCKDGNIKEAKNVL 426
Query: 89 VDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVYNMLRY 128
M ++ +P+ SSL+ + ++A S++N + +
Sbjct: 427 AMMMKQSIKPDVVTYSSLMDGYCLVNEVNKAESIFNTMSH 466
Score = 38.5 bits (88), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 18/72 (25%), Positives = 35/72 (48%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ C+SG E+ +++ D K DV M+ +C G + + ++ K++E
Sbjct: 584 LVKGLCQSGKLEDARKVFEDLLVKGYNLDVYAYTVMIQGFCDKGLFDEALALLSKMEENG 643
Query: 61 ISPDYNTFHILI 72
PD T+ I+I
Sbjct: 644 CIPDAKTYEIII 655
Score = 35.0 bits (79), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 20/99 (20%), Positives = 47/99 (47%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
MI+ FC+ +E +L + K DV+ +S++ C++G + + ++ ++
Sbjct: 479 MINGFCKIKMVDEAMKLFKEMHHKQIFPDVITYSSLIDGLCKSGRISYALELVDEMHYRG 538
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPE 99
PD T++ ++ CK+ A + + +G +P+
Sbjct: 539 QQPDIITYNSILDALCKKHHVDKAITLLTKLKGQGIRPD 577
>gi|224109690|ref|XP_002315278.1| predicted protein [Populus trichocarpa]
gi|222864318|gb|EEF01449.1| predicted protein [Populus trichocarpa]
Length = 728
Score = 52.8 bits (125), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 35/117 (29%), Positives = 60/117 (51%), Gaps = 5/117 (4%)
Query: 8 SGCFE-----ETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAIS 62
+GCFE E +L + E + K + V N M+ + + G M+ V +RK++E
Sbjct: 345 NGCFEHGSSEEGFKLIEEMEGRGMKPNSVTYNVMVKWFVKKGKMDEVDKTVRKMEESGCL 404
Query: 63 PDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEA 119
PD T++ LI + CK A+R M +M RKG + ++ ++++ L + R EA
Sbjct: 405 PDIVTYNTLISWHCKVGKMDEAFRLMDEMGRKGLKMDDVTLNTMLRALCRERKLDEA 461
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/124 (25%), Positives = 57/124 (45%), Gaps = 3/124 (2%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I +C+ G E+ Q K K DVV N++LC C+ G +E + +
Sbjct: 553 IIHGYCQEGQVEKAFQFHNKMVEKNFKPDVVTCNTLLCGLCKEGMLEKALKLFNTWISKG 612
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHL---GKMRAHS 117
D +++ +I CKEK + A+ + +M K P+ ++++ L G+M+
Sbjct: 613 KDVDAVSYNTIILSLCKEKRFGEAFDLLEEMEEKKLGPDCYTYNAILGGLTDAGRMKDAE 672
Query: 118 EALS 121
E +S
Sbjct: 673 EFIS 676
Score = 45.1 bits (105), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 26/127 (20%), Positives = 59/127 (46%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
M+ F + G +E + E D+V N+++ +C+ G M+ +M ++
Sbjct: 378 MVKWFVKKGKMDEVDKTVRKMEESGCLPDIVTYNTLISWHCKVGKMDEAFRLMDEMGRKG 437
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ D T + +++ C+E+ A+ + R+G+ +E +LI K S+AL
Sbjct: 438 LKMDDVTLNTMLRALCRERKLDEAHDLLCSARRRGYFVDEVSYGTLIIGYFKHEKASQAL 497
Query: 121 SVYNMLR 127
+++ ++
Sbjct: 498 RLWDEMK 504
Score = 44.3 bits (103), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 30/116 (25%), Positives = 57/116 (49%), Gaps = 3/116 (2%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
MIS FC+ G E +L + E DVV N+++ G E ++ +++
Sbjct: 308 MISGFCKQGRIAEAMRLREEMENLKLSPDVVTYNTLINGCFEHGSSEEGFKLIEEMEGRG 367
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLI-FH--LGKM 113
+ P+ T+++++K+F K+ +T+ M G P+ ++LI +H +GKM
Sbjct: 368 MKPNSVTYNVMVKWFVKKGKMDEVDKTVRKMEESGCLPDIVTYNTLISWHCKVGKM 423
Score = 43.5 bits (101), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 24/95 (25%), Positives = 47/95 (49%)
Query: 30 VVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYMLAYRTMV 89
++ NSM+ C+ G + + +L E + PD T++ +I +C+E A++
Sbjct: 512 IITYNSMIAGLCQMGKTNQAIDKLDELLESGLVPDEITYNTIIHGYCQEGQVEKAFQFHN 571
Query: 90 DMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVYN 124
M K +P+ C++L+ L K +AL ++N
Sbjct: 572 KMVEKNFKPDVVTCNTLLCGLCKEGMLEKALKLFN 606
Score = 42.4 bits (98), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 24/107 (22%), Positives = 49/107 (45%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ C+ G E + L D + K + N ++ CR G ++ +V+ + + +
Sbjct: 238 ILDGLCKKGRLNEARDLLLDMKNKGLFPNRTTFNILVVGCCRLGWLKEAANVIELMSQNS 297
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLI 107
+ PD T++++I FCK+ A R +M P+ ++LI
Sbjct: 298 VVPDAWTYNVMISGFCKQGRIAEAMRLREEMENLKLSPDVVTYNTLI 344
Score = 38.9 bits (89), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 37/157 (23%), Positives = 61/157 (38%), Gaps = 6/157 (3%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDK---YDVVLLNSMLCAYCRTGDMESVMHVMRKLD 57
MI+ C+ G +T Q + + D + N+++ YC+ G +E K+
Sbjct: 518 MIAGLCQMG---KTNQAIDKLDELLESGLVPDEITYNTIIHGYCQEGQVEKAFQFHNKMV 574
Query: 58 ELAISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHS 117
E PD T + L+ CKE M A + KG + +++I L K +
Sbjct: 575 EKNFKPDVVTCNTLLCGLCKEGMLEKALKLFNTWISKGKDVDAVSYNTIILSLCKEKRFG 634
Query: 118 EALSVYNMLRYSKRSMCKALHEKILHILISGKLLKDA 154
EA + + K + IL L +KDA
Sbjct: 635 EAFDLLEEMEEKKLGPDCYTYNAILGGLTDAGRMKDA 671
>gi|414592066|tpg|DAA42637.1| TPA: hypothetical protein ZEAMMB73_021738 [Zea mays]
Length = 768
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 53/107 (49%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ C G E +L + +AK K D+V+ NS++ CR G + + VM ++ E
Sbjct: 356 LINGLCAEGDIERALELFNEAQAKDLKPDLVVYNSLVKGLCRQGLILHALQVMNEMVEEG 415
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLI 107
PD T++I+I CK A M D KG+ P+ ++LI
Sbjct: 416 CHPDIWTYNIIINGLCKMGNISDAAVVMNDAIVKGYLPDVFTFNTLI 462
Score = 52.4 bits (124), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 33/124 (26%), Positives = 59/124 (47%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I +C+SG +E +L D K D V S++ C GD+E + + +
Sbjct: 321 IIDGYCKSGMLQEATELLKDAVFKGFVPDRVTYCSLINGLCAEGDIERALELFNEAQAKD 380
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ PD ++ L+K C++ + + A + M +M +G P+ + +I L KM S+A
Sbjct: 381 LKPDLVVYNSLVKGLCRQGLILHALQVMNEMVEEGCHPDIWTYNIIINGLCKMGNISDAA 440
Query: 121 SVYN 124
V N
Sbjct: 441 VVMN 444
Score = 48.9 bits (115), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 27/99 (27%), Positives = 48/99 (48%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I FC+ EE + D V N+++ +CR GD++ + +KLDE
Sbjct: 531 LIENFCKINQLEEASGVIVRMCQDGLVPDAVSFNTLIHGFCRNGDLDGAYLLFQKLDEKG 590
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPE 99
S +TF+ILI + + +A + +M KG++P+
Sbjct: 591 YSATADTFNILIGAYSSKLNMQMAEKIFGEMISKGYKPD 629
Score = 43.5 bits (101), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 28/122 (22%), Positives = 54/122 (44%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ C+ G + + D K DV N+++ YC+ ++S + ++ ++
Sbjct: 426 IINGLCKMGNISDAAVVMNDAIVKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWTYG 485
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
I+PD T++ ++ CK T +M KG +P + LI + K+ EA
Sbjct: 486 IAPDVITYNSVLNGLCKAGKAKEVNETFEEMILKGCRPNAITYNILIENFCKINQLEEAS 545
Query: 121 SV 122
V
Sbjct: 546 GV 547
Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 32/123 (26%), Positives = 49/123 (39%), Gaps = 1/123 (0%)
Query: 2 ISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAI 61
I C G EE L A Y DVV N+++ C+ ++ + ++
Sbjct: 253 IRGLCEDGRLEEAVALVERMGA-YVAPDVVTYNTLMRGLCKDSKVQEAAQYLGRMMNQGC 311
Query: 62 SPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEALS 121
PD T++ +I +CK M A + D KG P+ SLI L AL
Sbjct: 312 IPDDFTYNTIIDGYCKSGMLQEATELLKDAVFKGFVPDRVTYCSLINGLCAEGDIERALE 371
Query: 122 VYN 124
++N
Sbjct: 372 LFN 374
Score = 38.9 bits (89), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 27/107 (25%), Positives = 46/107 (42%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I +C+ + QL DV+ NS+L C+ G + V ++
Sbjct: 461 LIDGYCKRLKLDSALQLVERMWTYGIAPDVITYNSVLNGLCKAGKAKEVNETFEEMILKG 520
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLI 107
P+ T++ILI+ FCK A +V M + G P+ ++LI
Sbjct: 521 CRPNAITYNILIENFCKINQLEEASGVIVRMCQDGLVPDAVSFNTLI 567
Score = 35.8 bits (81), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 21/107 (19%), Positives = 49/107 (45%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+++ C++G +E + + K + + + N ++ +C+ +E V+ ++ +
Sbjct: 496 VLNGLCKAGKAKEVNETFEEMILKGCRPNAITYNILIENFCKINQLEEASGVIVRMCQDG 555
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLI 107
+ PD +F+ LI FC+ AY + KG+ + + LI
Sbjct: 556 LVPDAVSFNTLIHGFCRNGDLDGAYLLFQKLDEKGYSATADTFNILI 602
>gi|225461407|ref|XP_002282230.1| PREDICTED: pentatricopeptide repeat-containing protein At4g21705,
mitochondrial [Vitis vinifera]
Length = 504
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 31/132 (23%), Positives = 67/132 (50%), Gaps = 5/132 (3%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
M+ + + G E+T+ L ++E+ + YD + N++L +C+ G +E ++R + E
Sbjct: 319 MLGSLVKLGELEDTEALLKEWESSGNCYDFRVPNTLLIGFCQKGLIEKAESMLRDIVEEG 378
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTM-----VDMHRKGHQPEEELCSSLIFHLGKMRA 115
+P N++ I+ + +++ A+ M V KG +P+ ++ SS++ LG R
Sbjct: 379 KTPTPNSWSIVAAGYIEKQNMEKAFECMKEAIAVLAENKGWRPKPKVISSILSWLGDNRD 438
Query: 116 HSEALSVYNMLR 127
E + + L+
Sbjct: 439 VEEVETFVSALK 450
>gi|297849270|ref|XP_002892516.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297338358|gb|EFH68775.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 607
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 24/100 (24%), Positives = 52/100 (52%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+++ FC++G + + + + D V +++ +CR GD+++ + + +++D+
Sbjct: 386 LVNGFCKNGDLVAARNIVDGMIRRGLRPDKVTYTTLIDGFCRGGDVDTALEIRKEMDQNG 445
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEE 100
I D F LI CKE + A R + +M R G +P++
Sbjct: 446 IELDRVGFSALICGMCKEGRVIDAERALREMLRAGMKPDD 485
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 32/150 (21%), Positives = 70/150 (46%), Gaps = 8/150 (5%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+++ FC+ G + +++ + + + VV N+++ YC+ G+++ + +++
Sbjct: 246 LMNKFCKEGNICDAQKVFDEITKRSLRPTVVSFNTLINGYCKVGNLDVGFRLKHHMEKSR 305
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
PD T+ LI CKE A+R +M +G P + + ++LI HS
Sbjct: 306 TRPDVFTYSALINALCKENKMDGAHRLFYEMCERGLIPNDVIFTTLI------HGHSRNG 359
Query: 121 SVYNMLRYSKRSMCKALHEKIL--HILISG 148
+ M ++ + K L I+ + L++G
Sbjct: 360 QIDLMKESYQKMLSKGLQPDIVLYNTLVNG 389
Score = 48.9 bits (115), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 21/99 (21%), Positives = 47/99 (47%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I FCR G + ++ + + + D V ++++C C+ G + +R++
Sbjct: 421 LIDGFCRGGDVDTALEIRKEMDQNGIELDRVGFSALICGMCKEGRVIDAERALREMLRAG 480
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPE 99
+ PD T+ +++ FCK+ ++ + +M GH P
Sbjct: 481 MKPDDVTYTMMMDAFCKKGDAQTGFKLLKEMQSDGHIPN 519
Score = 41.2 bits (95), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 25/107 (23%), Positives = 51/107 (47%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I R+G + K+ +K + D+VL N+++ +C+ GD+ + +++ +
Sbjct: 351 LIHGHSRNGQIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRG 410
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLI 107
+ PD T+ LI FC+ A +M + G + + S+LI
Sbjct: 411 LRPDKVTYTTLIDGFCRGGDVDTALEIRKEMDQNGIELDRVGFSALI 457
>gi|218198940|gb|EEC81367.1| hypothetical protein OsI_24568 [Oryza sativa Indica Group]
Length = 1380
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 49/99 (49%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I FCRS EE ++ + D V N+++ +CR GD+E + +KL+E
Sbjct: 507 LIENFCRSNKMEEASKVIVKMSQEGLHPDAVSFNTLIYGFCRNGDLEGAYLLFQKLEEKG 566
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPE 99
S +TF+ LI F + +A + +M KGH+ +
Sbjct: 567 YSATADTFNTLIGAFSGKLNMHMAEKIFDEMLSKGHRAD 605
Score = 52.0 bits (123), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 52/107 (48%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ C G E +L + +AK K D+V+ NS++ C G + + VM ++ E
Sbjct: 332 LINGLCAEGDVERALELFNEAQAKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEG 391
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLI 107
PD T++I+I CK A M D KG+ P+ ++LI
Sbjct: 392 CHPDIQTYNIVINGLCKMGNISDATVVMNDAIMKGYLPDVFTFNTLI 438
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/124 (25%), Positives = 57/124 (45%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I +C+ +E +L D K D V S++ C GD+E + + +
Sbjct: 297 IIDGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLINGLCAEGDVERALELFNEAQAKG 356
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
I PD ++ L+K C + + + A + M +M +G P+ + + +I L KM S+A
Sbjct: 357 IKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYNIVINGLCKMGNISDAT 416
Query: 121 SVYN 124
V N
Sbjct: 417 VVMN 420
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/123 (27%), Positives = 53/123 (43%), Gaps = 1/123 (0%)
Query: 2 ISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAI 61
I C +G E +L A Y DVV N+++ C+ + MH +R++
Sbjct: 229 IRGLCEAGRLPEAVRLVDGMRA-YAVPDVVTYNTLIRGLCKKSMPQEAMHYLRRMMNQGC 287
Query: 62 SPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEALS 121
PD T++ +I +CK M A + D KG P++ SLI L AL
Sbjct: 288 LPDDFTYNTIIDGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLINGLCAEGDVERALE 347
Query: 122 VYN 124
++N
Sbjct: 348 LFN 350
Score = 43.9 bits (102), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 33/145 (22%), Positives = 61/145 (42%), Gaps = 17/145 (11%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ C+ G + + D K DV N+++ YC+ ++S + ++ ++ E
Sbjct: 402 VINGLCKMGNISDATVVMNDAIMKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWEYG 461
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPE--------EELC--------S 104
I+PD T++ ++ CK T +M KG P E C S
Sbjct: 462 IAPDTITYNSVLNGLCKAGKVNEVNETFQEMILKGCHPNPITYNILIENFCRSNKMEEAS 521
Query: 105 SLIFHLGKMRAHSEALSVYNMLRYS 129
+I + + H +A+S +N L Y
Sbjct: 522 KVIVKMSQEGLHPDAVS-FNTLIYG 545
Score = 43.9 bits (102), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 27/117 (23%), Positives = 53/117 (45%), Gaps = 1/117 (0%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+++ C++G E + + K + + N ++ +CR+ ME V+ K+ +
Sbjct: 472 VLNGLCKAGKVNEVNETFQEMILKGCHPNPITYNILIENFCRSNKMEEASKVIVKMSQEG 531
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHL-GKMRAH 116
+ PD +F+ LI FC+ AY + KG+ + ++LI GK+ H
Sbjct: 532 LHPDAVSFNTLIYGFCRNGDLEGAYLLFQKLEEKGYSATADTFNTLIGAFSGKLNMH 588
>gi|357140697|ref|XP_003571900.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09820-like [Brachypodium distachyon]
Length = 571
Score = 52.8 bits (125), Expect = 5e-05, Method: Composition-based stats.
Identities = 31/113 (27%), Positives = 57/113 (50%), Gaps = 3/113 (2%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHV---MRKLD 57
+IS C++G + +A D A VV N+++ YC+ G + HV ++++
Sbjct: 191 VISGLCKTGQLRKAGDVAKDIRAWGLAPSVVTYNTIIDGYCKRGRAGRMYHVDALLKEMV 250
Query: 58 ELAISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHL 110
E ISP+ TF++L+ +CK+ A R +M ++G S+L++ L
Sbjct: 251 EAGISPNEVTFNVLVNGYCKDSNTAAAVRVFEEMKQQGIAASVVTYSALVWGL 303
Score = 38.5 bits (88), Expect = 1.0, Method: Composition-based stats.
Identities = 26/125 (20%), Positives = 58/125 (46%), Gaps = 5/125 (4%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ F R+G + L + K + D+V N ++ A C G++ + ++ ++ +
Sbjct: 404 LIAGFTRNGDWRSVSGLLDEMRMKGVRADIVTYNVLIGALCVKGEVRKAVKLLDEMLMVG 463
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIF----HLGKMRAH 116
+ P + T++ +I +C++ AY M KG + + ++ +GKM
Sbjct: 464 LEPVHLTYNTIINGYCEKGNIKSAYEIRTRM-EKGKKRANVVTYNVFIKCLCRMGKMEET 522
Query: 117 SEALS 121
+E L+
Sbjct: 523 NELLN 527
>gi|326510071|dbj|BAJ87252.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 825
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 35/125 (28%), Positives = 57/125 (45%)
Query: 2 ISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAI 61
I A C G EE L K K V+ S++ YC+ GD++S +M K+
Sbjct: 413 IDALCDEGQLEEAHSLFSCLPMKGIKAHNVIYTSLVHGYCQVGDIDSAFGLMEKMASENC 472
Query: 62 SPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEALS 121
PD +T++ LI CK K A + M ++G +P + LI + + H++A
Sbjct: 473 MPDVHTYNTLIDGLCKVKRLDRAIDLLDKMKKQGIEPTTCTFNILIKQMLWDKKHADAAK 532
Query: 122 VYNML 126
+Y +
Sbjct: 533 MYEQM 537
Score = 40.8 bits (94), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 24/107 (22%), Positives = 48/107 (44%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ C+ G ++ + K +V+ N+++ YC+ GDM++ + V++ +
Sbjct: 272 VVHGLCKHGKVGHGAKVLHEAIGKGVALEVLTYNALINGYCKGGDMKAALDVLQLMKRNR 331
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLI 107
++P TF+ +I FC A + M G P +SLI
Sbjct: 332 VNPGVQTFNEVIHGFCCGGKVHKAMAFLTQMAGAGLSPNTVTFNSLI 378
Score = 35.8 bits (81), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 22/107 (20%), Positives = 42/107 (39%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I FC G + + V NS++ C G+ + + ++ ++E
Sbjct: 342 VIHGFCCGGKVHKAMAFLTQMAGAGLSPNTVTFNSLISGQCSVGERKIALRLLDLMEEYG 401
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLI 107
+ PD T+ I I C E A+ + KG + + +SL+
Sbjct: 402 VLPDRQTYAIFIDALCDEGQLEEAHSLFSCLPMKGIKAHNVIYTSLV 448
>gi|222636287|gb|EEE66419.1| hypothetical protein OsJ_22769 [Oryza sativa Japonica Group]
Length = 1393
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 49/99 (49%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I FCRS EE ++ + D V N+++ +CR GD+E + +KL+E
Sbjct: 506 LIENFCRSNKMEEASKVIVKMSQEGLHPDAVSFNTLIYGFCRNGDLEGAYLLFQKLEEKG 565
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPE 99
S +TF+ LI F + +A + +M KGH+ +
Sbjct: 566 YSATADTFNTLIGAFSGKLNMHMAEKIFDEMLSKGHRAD 604
Score = 52.0 bits (123), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 52/107 (48%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ C G E +L + +AK K D+V+ NS++ C G + + VM ++ E
Sbjct: 331 LINGLCAEGDVERALELFNEAQAKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEG 390
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLI 107
PD T++I+I CK A M D KG+ P+ ++LI
Sbjct: 391 CHPDIQTYNIVINGLCKMGNISDATVVMNDAIMKGYLPDVFTFNTLI 437
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/124 (25%), Positives = 57/124 (45%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I +C+ +E +L D K D V S++ C GD+E + + +
Sbjct: 296 IIDGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLINGLCAEGDVERALELFNEAQAKG 355
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
I PD ++ L+K C + + + A + M +M +G P+ + + +I L KM S+A
Sbjct: 356 IKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYNIVINGLCKMGNISDAT 415
Query: 121 SVYN 124
V N
Sbjct: 416 VVMN 419
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/123 (27%), Positives = 53/123 (43%), Gaps = 1/123 (0%)
Query: 2 ISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAI 61
I C +G E +L A Y DVV N+++ C+ + MH +R++
Sbjct: 228 IRGLCEAGRLPEAVRLVDGMRA-YAVPDVVTYNTLIRGLCKKSMPQEAMHYLRRMMNQGC 286
Query: 62 SPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEALS 121
PD T++ +I +CK M A + D KG P++ SLI L AL
Sbjct: 287 LPDDFTYNTIIDGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLINGLCAEGDVERALE 346
Query: 122 VYN 124
++N
Sbjct: 347 LFN 349
Score = 43.9 bits (102), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 33/145 (22%), Positives = 61/145 (42%), Gaps = 17/145 (11%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ C+ G + + D K DV N+++ YC+ ++S + ++ ++ E
Sbjct: 401 VINGLCKMGNISDATVVMNDAIMKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWEYG 460
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPE--------EELC--------S 104
I+PD T++ ++ CK T +M KG P E C S
Sbjct: 461 IAPDTITYNSVLNGLCKAGKVNEVNETFQEMILKGCHPNPITYNILIENFCRSNKMEEAS 520
Query: 105 SLIFHLGKMRAHSEALSVYNMLRYS 129
+I + + H +A+S +N L Y
Sbjct: 521 KVIVKMSQEGLHPDAVS-FNTLIYG 544
Score = 43.5 bits (101), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 27/117 (23%), Positives = 53/117 (45%), Gaps = 1/117 (0%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+++ C++G E + + K + + N ++ +CR+ ME V+ K+ +
Sbjct: 471 VLNGLCKAGKVNEVNETFQEMILKGCHPNPITYNILIENFCRSNKMEEASKVIVKMSQEG 530
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHL-GKMRAH 116
+ PD +F+ LI FC+ AY + KG+ + ++LI GK+ H
Sbjct: 531 LHPDAVSFNTLIYGFCRNGDLEGAYLLFQKLEEKGYSATADTFNTLIGAFSGKLNMH 587
>gi|15239161|ref|NP_201383.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75170571|sp|Q9FH87.1|PP447_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At5g65820
gi|9758569|dbj|BAB09050.1| unnamed protein product [Arabidopsis thaliana]
gi|332010728|gb|AED98111.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 637
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 33/129 (25%), Positives = 60/129 (46%), Gaps = 2/129 (1%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ A C+ G ++ +L D ++ ++ S+L +CR G M +V+ +++E
Sbjct: 224 LLDALCKHGSVKDAAKLFEDMRMRF-PVNLRYFTSLLYGWCRVGKMMEAKYVLVQMNEAG 282
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
PD + L+ + AY + DM R+G +P + LI L K+ EA+
Sbjct: 283 FEPDIVDYTNLLSGYANAGKMADAYDLLRDMRRRGFEPNANCYTVLIQALCKVDRMEEAM 342
Query: 121 SVY-NMLRY 128
V+ M RY
Sbjct: 343 KVFVEMERY 351
>gi|357498925|ref|XP_003619751.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355494766|gb|AES75969.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 562
Score = 52.8 bits (125), Expect = 5e-05, Method: Composition-based stats.
Identities = 35/122 (28%), Positives = 55/122 (45%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ AFC+ G +E K + K DVV NS++ YC ++ + +
Sbjct: 317 LVDAFCKEGRVKEAKNGLAMMMKQGIKPDVVTYNSLMDRYCLVNEVNKAKSIFNTMSHRG 376
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
++ + ++ I+I FCK KM A + +MH K P SSLI L K S AL
Sbjct: 377 VTANVRSYSIMINRFCKIKMVDQAMKLFKEMHHKQIFPNVITYSSLIDGLCKSGRISYAL 436
Query: 121 SV 122
+
Sbjct: 437 EL 438
Score = 48.9 bits (115), Expect = 7e-04, Method: Composition-based stats.
Identities = 30/128 (23%), Positives = 62/128 (48%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I + C+ + L + +K DV N+++ +C G ++ + + K+
Sbjct: 247 IIDSMCKDKLDNDAFDLYSEMVSKRIFPDVNTYNALINGFCIVGKLKDAIGLFNKMTSEN 306
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
I+PD TF+IL+ FCKE A + M ++G +P+ +SL+ + ++A
Sbjct: 307 INPDVYTFNILVDAFCKEGRVKEAKNGLAMMMKQGIKPDVVTYNSLMDRYCLVNEVNKAK 366
Query: 121 SVYNMLRY 128
S++N + +
Sbjct: 367 SIFNTMSH 374
>gi|48716454|dbj|BAD23061.1| UDP-glucoronosyl/UDP-glucosyl transferase family protein-like
[Oryza sativa Japonica Group]
Length = 580
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 29/103 (28%), Positives = 49/103 (47%)
Query: 5 FCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPD 64
C G +E L + + + + D V N+++ AYC+ GDM S + V R++ E + D
Sbjct: 330 LCEDGKMKEVNVLLNEMDERKVQADHVTCNTLINAYCKRGDMTSALKVKRRMMESGLQLD 389
Query: 65 YNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLI 107
T+ L+ FCK K A + +M G P + S ++
Sbjct: 390 QFTYKALVHGFCKAKELDEAKEALFEMMGAGFSPNYSVLSWIV 432
Score = 39.7 bits (91), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 27/117 (23%), Positives = 55/117 (47%), Gaps = 3/117 (2%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ +CR G E + E + K DVV NS++ C+ ++ ++R++
Sbjct: 221 VIALYCRKGMQYEAMCVRERMENQGVKADVVTWNSLIHGLCKERRVKEASQLLREMAMAG 280
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHL---GKMR 114
++PD+ T+ L+ +C+ A + +M G P ++++ L GKM+
Sbjct: 281 VAPDHVTYTTLVDGYCRAGDLEEAVKLRGEMEAMGMLPGVATYNAILRKLCEDGKMK 337
Score = 35.4 bits (80), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 24/95 (25%), Positives = 42/95 (44%), Gaps = 4/95 (4%)
Query: 17 LAGDFEAKYDKYDVVL----LNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILI 72
LA + D V L N+++ YCR G M V +++ + D T++ LI
Sbjct: 198 LAESLMTRMDAAGVPLDRFSFNTVIALYCRKGMQYEAMCVRERMENQGVKADVVTWNSLI 257
Query: 73 KYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLI 107
CKE+ A + + +M G P+ ++L+
Sbjct: 258 HGLCKERRVKEASQLLREMAMAGVAPDHVTYTTLV 292
>gi|356561387|ref|XP_003548963.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62670,
mitochondrial-like [Glycine max]
Length = 520
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 31/113 (27%), Positives = 55/113 (48%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C+ G +E+K L K K DVV+ + ++ YC G+++ + + +
Sbjct: 226 LIDTLCKEGKVKESKNLLAVMTKKGVKPDVVIYSILMDGYCLVGEVQKAKQIFLVMVQTG 285
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKM 113
++PD +++I+I CK K A + +M K P+ SSLI L K+
Sbjct: 286 VNPDVYSYNIIINGLCKGKRVDEAMNLLREMLHKNMIPDTVTYSSLIDGLCKL 338
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 22/99 (22%), Positives = 46/99 (46%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C+ +E L + A+ DV+ +++C +C G + ++ ++
Sbjct: 156 IIDGLCKDKLVDEAYDLYSEMNARGIFPDVITYTTLICGFCLAGQLMEAFGLLNEMILKN 215
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPE 99
I+P+ T++ LI CKE + + M +KG +P+
Sbjct: 216 INPNIYTYNTLIDTLCKEGKVKESKNLLAVMTKKGVKPD 254
Score = 37.4 bits (85), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 22/107 (20%), Positives = 49/107 (45%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ C G +++ A+ + D V +L C+ G+ + ++R +++ +
Sbjct: 86 LMKGLCLKGEVKKSLHFHDKVVAQGFQMDQVSYGILLNGLCKIGETRCAIKLLRTIEDRS 145
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLI 107
PD + +I CK+K+ AY +M+ +G P+ ++LI
Sbjct: 146 TRPDVVMYSTIIDGLCKDKLVDEAYDLYSEMNARGIFPDVITYTTLI 192
Score = 35.4 bits (80), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 28/125 (22%), Positives = 56/125 (44%), Gaps = 3/125 (2%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+++ C+ G +L E + + DVV+ ++++ C+ ++ + +++
Sbjct: 121 LLNGLCKIGETRCAIKLLRTIEDRSTRPDVVMYSTIIDGLCKDKLVDEAYDLYSEMNARG 180
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHL---GKMRAHS 117
I PD T+ LI FC M A+ + +M K P ++LI L GK++
Sbjct: 181 IFPDVITYTTLICGFCLAGQLMEAFGLLNEMILKNINPNIYTYNTLIDTLCKEGKVKESK 240
Query: 118 EALSV 122
L+V
Sbjct: 241 NLLAV 245
>gi|297834714|ref|XP_002885239.1| EMB1270 [Arabidopsis lyrata subsp. lyrata]
gi|297331079|gb|EFH61498.1| EMB1270 [Arabidopsis lyrata subsp. lyrata]
Length = 1429
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 36/161 (22%), Positives = 69/161 (42%), Gaps = 16/161 (9%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
MI C+ + + + + E K ++ + NSML Y D + + V +++ E
Sbjct: 898 MIELLCKGKRVRDAEIMVSEMEEANFKVELAIWNSMLKMYTVIEDYKKTVQVYQRIKESG 957
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ PD T++ LI +C+++ Y M M G P+ + SLI GK + +A
Sbjct: 958 LEPDETTYNTLIIMYCRDRRPEEGYSLMQQMRNLGLDPKLDTYKSLISAFGKQKCLEQAE 1017
Query: 121 SVY----------------NMLRYSKRSMCKALHEKILHIL 145
++ M++ S+ S + EK+L ++
Sbjct: 1018 QLFEELLSKGLKLDRSFYHTMMKISRDSGSDSKAEKLLQMM 1058
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 58/123 (47%), Gaps = 1/123 (0%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
MIS + R G E ++L + E K D V NS+L A+ R + E V V +++ ++
Sbjct: 338 MISVYGRCGLAAEAERLFIELELKGFSPDAVTYNSLLYAFARERNTEKVKEVYQQMQKMG 397
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHR-KGHQPEEELCSSLIFHLGKMRAHSEA 119
D T++ +I + K+ LA + DM G P+ + LI LGK EA
Sbjct: 398 FGKDEMTYNTIIHMYGKQGQLDLALQLYKDMKGLSGRNPDAITYTVLIDSLGKANRSVEA 457
Query: 120 LSV 122
++
Sbjct: 458 AAL 460
Score = 41.2 bits (95), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 21/101 (20%), Positives = 47/101 (46%)
Query: 27 KYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYMLAYR 86
+ D + N++L A R ++E + V ++ PD T++ +I + + + A R
Sbjct: 294 RPDAITYNTLLSACSRDSNLEGAVKVFEDMEAHRCQPDLWTYNAMISVYGRCGLAAEAER 353
Query: 87 TMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVYNMLR 127
+++ KG P+ +SL++ + R + VY ++
Sbjct: 354 LFIELELKGFSPDAVTYNSLLYAFARERNTEKVKEVYQQMQ 394
Score = 40.4 bits (93), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 31/130 (23%), Positives = 65/130 (50%), Gaps = 9/130 (6%)
Query: 35 SMLCAYCRTGDMESVMHVMRKLDE----LAISPDYNTFHILIKYFCKEKMYMLAYRTMVD 90
SM+ YC+ G E+ V+ + + A SP Y +I+ + K K++ A + +
Sbjct: 721 SMVVVYCKLGFPETAYQVVNQAETKGFHFACSPMYTD---IIEAYGKLKLWQKAESVVGN 777
Query: 91 MHRKGHQPEEELCSSLIFHLGKMRAHSEALSVYN-MLRYSKRSMCKALHEKILHILISGK 149
+ + G P+ + +SL+ + + A +++N M+R ++++ K+LH L
Sbjct: 778 LRQSGRTPDLKTWNSLMSAYAECGCYERARAIFNTMMRDGPSPTVESIN-KLLHALCVDG 836
Query: 150 LLKDAYIVVK 159
L++ Y+VV+
Sbjct: 837 RLEELYVVVE 846
Score = 37.4 bits (85), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 30/123 (24%), Positives = 52/123 (42%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++SA R E ++ D EA + D+ N+M+ Y R G + +L+
Sbjct: 303 LLSACSRDSNLEGAVKVFEDMEAHRCQPDLWTYNAMISVYGRCGLAAEAERLFIELELKG 362
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
SPD T++ L+ F +E+ M + G +E +++I GK AL
Sbjct: 363 FSPDAVTYNSLLYAFARERNTEKVKEVYQQMQKMGFGKDEMTYNTIIHMYGKQGQLDLAL 422
Query: 121 SVY 123
+Y
Sbjct: 423 QLY 425
>gi|15218241|ref|NP_172439.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75097039|sp|O04491.1|PPR26_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At1g09680
gi|2160161|gb|AAB60724.1| F21M12.7 gene product [Arabidopsis thaliana]
gi|332190358|gb|AEE28479.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 607
Score = 52.4 bits (124), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 23/100 (23%), Positives = 52/100 (52%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+++ FC++G + + + + D + +++ +CR GD+E+ + + +++D+
Sbjct: 386 LVNGFCKNGDLVAARNIVDGMIRRGLRPDKITYTTLIDGFCRGGDVETALEIRKEMDQNG 445
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEE 100
I D F L+ CKE + A R + +M R G +P++
Sbjct: 446 IELDRVGFSALVCGMCKEGRVIDAERALREMLRAGIKPDD 485
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/98 (23%), Positives = 47/98 (47%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I FCR G E ++ + + + D V ++++C C+ G + +R++
Sbjct: 421 LIDGFCRGGDVETALEIRKEMDQNGIELDRVGFSALVCGMCKEGRVIDAERALREMLRAG 480
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQP 98
I PD T+ +++ FCK+ ++ + +M GH P
Sbjct: 481 IKPDDVTYTMMMDAFCKKGDAQTGFKLLKEMQSDGHVP 518
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/150 (20%), Positives = 71/150 (47%), Gaps = 8/150 (5%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+++ FC+ G + +++ + + + VV N+++ YC+ G+++ + ++++
Sbjct: 246 LMNKFCKEGNISDAQKVFDEITKRSLQPTVVSFNTLINGYCKVGNLDEGFRLKHQMEKSR 305
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
PD T+ LI CKE A+ +M ++G P + + ++LI HS
Sbjct: 306 TRPDVFTYSALINALCKENKMDGAHGLFDEMCKRGLIPNDVIFTTLI------HGHSRNG 359
Query: 121 SVYNMLRYSKRSMCKALHEKIL--HILISG 148
+ M ++ + K L I+ + L++G
Sbjct: 360 EIDLMKESYQKMLSKGLQPDIVLYNTLVNG 389
Score = 40.4 bits (93), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 24/107 (22%), Positives = 51/107 (47%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I R+G + K+ +K + D+VL N+++ +C+ GD+ + +++ +
Sbjct: 351 LIHGHSRNGEIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRG 410
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLI 107
+ PD T+ LI FC+ A +M + G + + S+L+
Sbjct: 411 LRPDKITYTTLIDGFCRGGDVETALEIRKEMDQNGIELDRVGFSALV 457
>gi|357151724|ref|XP_003575883.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
chloroplastic-like [Brachypodium distachyon]
Length = 757
Score = 52.4 bits (124), Expect = 6e-05, Method: Composition-based stats.
Identities = 38/154 (24%), Positives = 66/154 (42%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ C +G EE K + D N+++ A C +E + + R+L
Sbjct: 342 VINCLCNNGELEEAKGIVNQMVDSGCLPDTTTFNTLIVALCTENQLEEALDLARELTVKG 401
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+SP+ TF+ILI CK LA R +M G P+E + LI +L ++AL
Sbjct: 402 LSPNVYTFNILINALCKVGDPHLAVRLFEEMKSSGCTPDEVTYNILIDNLCSSGKLAKAL 461
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLKDA 154
+ + S + I+ L + +++A
Sbjct: 462 DLLKEMEVSGCPQSTVTYNTIIDGLCKRRRIEEA 495
Score = 44.7 bits (104), Expect = 0.014, Method: Composition-based stats.
Identities = 31/126 (24%), Positives = 52/126 (41%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I A C EE LA + K +V N ++ A C+ GD + + ++
Sbjct: 377 LIVALCTENQLEEALDLARELTVKGLSPNVYTFNILINALCKVGDPHLAVRLFEEMKSSG 436
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+PD T++ILI C A + +M G +++I L K R EA
Sbjct: 437 CTPDEVTYNILIDNLCSSGKLAKALDLLKEMEVSGCPQSTVTYNTIIDGLCKRRRIEEAE 496
Query: 121 SVYNML 126
V++ +
Sbjct: 497 EVFDQM 502
Score = 43.1 bits (100), Expect = 0.040, Method: Composition-based stats.
Identities = 26/123 (21%), Positives = 55/123 (44%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C + ++ +L ++ + + V NS+L YC+ G++ +++ +
Sbjct: 517 LIDGLCNAERIDDAAELVDQMISEGLQPNNVTYNSILTHYCKQGNISKAADILQTMTANG 576
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
D T+ LI CK + A + + M KG +P + + +I L + +AL
Sbjct: 577 FEVDVVTYATLINGLCKARRTQAALKLLRGMRMKGMKPTPKAYNPVIQSLFRGNNGRDAL 636
Query: 121 SVY 123
S++
Sbjct: 637 SLF 639
Score = 38.1 bits (87), Expect = 1.3, Method: Composition-based stats.
Identities = 24/92 (26%), Positives = 41/92 (44%)
Query: 29 DVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYMLAYRTM 88
DVV N+++ A CR + + ++ ++ ++PD TF L++ F +E A R
Sbjct: 195 DVVTFNTVIDALCRARQARTAVLMLEEMSSCDVAPDETTFTTLMEGFVEEGSIEAALRLK 254
Query: 89 VDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
M G P + LI K+ +AL
Sbjct: 255 ARMSEMGCSPTSVTVNVLINGYCKLGRVGDAL 286
Score = 36.2 bits (82), Expect = 4.3, Method: Composition-based stats.
Identities = 37/156 (23%), Positives = 67/156 (42%), Gaps = 9/156 (5%)
Query: 2 ISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAI 61
++ C++G + ++ G + + DV ++++ C G++E ++ ++ +
Sbjct: 308 VNGLCQNGHVDHALKVLGLMLQEGCEPDVYTYSTVINCLCNNGELEEAKGIVNQMVDSGC 367
Query: 62 SPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEALS 121
PD TF+ LI C E A ++ KG P + LI L K+ A+
Sbjct: 368 LPDTTTFNTLIVALCTENQLEEALDLARELTVKGLSPNVYTFNILINALCKVGDPHLAVR 427
Query: 122 VYNMLRYSKRSMCKALHEKILHILI-----SGKLLK 152
++ + K S C E +ILI SGKL K
Sbjct: 428 LFEEM---KSSGCTP-DEVTYNILIDNLCSSGKLAK 459
Score = 36.2 bits (82), Expect = 5.1, Method: Composition-based stats.
Identities = 28/126 (22%), Positives = 49/126 (38%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C SG + L + E V N+++ C+ +E V ++D
Sbjct: 447 LIDNLCSSGKLAKALDLLKEMEVSGCPQSTVTYNTIIDGLCKRRRIEEAEEVFDQMDVTG 506
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
I + TF+ LI C + A + M +G QP +S++ H K S+A
Sbjct: 507 IGRNAITFNTLIDGLCNAERIDDAAELVDQMISEGLQPNNVTYNSILTHYCKQGNISKAA 566
Query: 121 SVYNML 126
+ +
Sbjct: 567 DILQTM 572
>gi|297806221|ref|XP_002870994.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297316831|gb|EFH47253.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 819
Score = 52.4 bits (124), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 42/193 (21%), Positives = 77/193 (39%), Gaps = 35/193 (18%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHV-------- 52
+ISA+ R G +E +L K K DV ++L + R G +ES M++
Sbjct: 355 LISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMNIFEEMRNAG 414
Query: 53 ------------------------MRKLDEL---AISPDYNTFHILIKYFCKEKMYMLAY 85
M+ DE+ +SPD T++ L+ F + M
Sbjct: 415 CKPNICTFNAFIKMYGNRGKFVDMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVS 474
Query: 86 RTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVYNMLRYSKRSMCKALHEKILHIL 145
+M R G PE E ++LI + + +A++VY + + + + + +L L
Sbjct: 475 GVFKEMKRAGFVPERETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAAL 534
Query: 146 ISGKLLKDAYIVV 158
G + + + V+
Sbjct: 535 ARGGMWEQSEKVL 547
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/113 (23%), Positives = 55/113 (48%)
Query: 7 RSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYN 66
RS F +++++ + AK K D++ N+++ AYCR M + ++ + I PD
Sbjct: 676 RSADFGKSEEILREILAKGIKPDIISYNTVIYAYCRNTRMRDASRIFSEMRDSGIVPDVI 735
Query: 67 TFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEA 119
T++ I + + M+ A + M + G +P + +S++ K+ EA
Sbjct: 736 TYNTFIGSYAADSMFEEAIGVVRYMIKHGCRPNQNTYNSIVDGYCKLNRKDEA 788
Score = 43.1 bits (100), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 24/93 (25%), Positives = 49/93 (52%), Gaps = 7/93 (7%)
Query: 8 SGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNT 67
SG F+E K+ AG F + + + N+++ AY R G E M V R++ + ++PD +T
Sbjct: 474 SGVFKEMKR-AG-FVPERETF-----NTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLST 526
Query: 68 FHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEE 100
++ ++ + M+ + + + +M +P E
Sbjct: 527 YNTVLAALARGGMWEQSEKVLAEMEDGRCKPNE 559
Score = 38.1 bits (87), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 28/132 (21%), Positives = 62/132 (46%), Gaps = 3/132 (2%)
Query: 6 CRSGCF-EETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPD 64
C+ G +E Q+ + +A +D V N++L Y ++ + M V+ +++ SP
Sbjct: 289 CKRGSLHQEAAQVFEEMKAAGFSHDKVTYNALLDVYGKSHRPKEAMKVLNEMELNGFSPS 348
Query: 65 YNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVYN 124
T++ LI + ++ M A M KG +P+ ++L+ + A++++
Sbjct: 349 IVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMNIFE 408
Query: 125 MLRYS--KRSMC 134
+R + K ++C
Sbjct: 409 EMRNAGCKPNIC 420
>gi|125584236|gb|EAZ25167.1| hypothetical protein OsJ_08968 [Oryza sativa Japonica Group]
Length = 566
Score = 52.4 bits (124), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 29/107 (27%), Positives = 51/107 (47%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ C G +E L + + + + D V N+++ AYC+ GDM S + V R++ E
Sbjct: 297 ILRKLCEDGKMKEVNVLLNEMDERKVQADHVTCNTLINAYCKRGDMTSALKVKRRMMESG 356
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLI 107
+ D T+ L+ FCK K A + +M G P + S ++
Sbjct: 357 LQLDQFTYKALVHGFCKAKELDEAKEALFEMMGAGFSPNYSVLSWIV 403
Score = 38.5 bits (88), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 29/109 (26%), Positives = 48/109 (44%)
Query: 11 FEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHI 70
EE +L G+ EA V N++L C G M+ V ++ ++DE + D+ T +
Sbjct: 272 LEEAVKLRGEMEAMGMLPGVATYNAILRKLCEDGKMKEVNVLLNEMDERKVQADHVTCNT 331
Query: 71 LIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEA 119
LI +CK A + M G Q ++ +L+ K + EA
Sbjct: 332 LINAYCKRGDMTSALKVKRRMMESGLQLDQFTYKALVHGFCKAKELDEA 380
Score = 37.0 bits (84), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 32/160 (20%), Positives = 70/160 (43%), Gaps = 6/160 (3%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCR------TGDMESVMHVMR 54
+I+ +CR G E + E + K DVV NS++ C+ D+E + +
Sbjct: 221 VIALYCRKGMQYEAMCVRERMENQGVKADVVTWNSLIHGLCKERRVKEASDLEEAVKLRG 280
Query: 55 KLDELAISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMR 114
+++ + + P T++ +++ C++ + +M + Q + C++LI K
Sbjct: 281 EMEAMGMLPGVATYNAILRKLCEDGKMKEVNVLLNEMDERKVQADHVTCNTLINAYCKRG 340
Query: 115 AHSEALSVYNMLRYSKRSMCKALHEKILHILISGKLLKDA 154
+ AL V + S + + ++ ++H K L +A
Sbjct: 341 DMTSALKVKRRMMESGLQLDQFTYKALVHGFCKAKELDEA 380
>gi|356499327|ref|XP_003518493.1| PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
mitochondrial-like [Glycine max]
Length = 725
Score = 52.4 bits (124), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 39/78 (50%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ FC+ G EE ++ AK + V N ++CA C+ G++E + + ++
Sbjct: 418 LINGFCKQGRLEEAAEIVNSMSAKGLSLNTVGYNCLICALCKDGNIEEALQLFGEMSGKG 477
Query: 61 ISPDYNTFHILIKYFCKE 78
PD TF+ LI CK
Sbjct: 478 CKPDIYTFNSLINGLCKN 495
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 31/112 (27%), Positives = 50/112 (44%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+IS CR+G + + D + D+V NS++ C+ G ++ ++ KL
Sbjct: 593 LISGLCRTGKVNDALKFLQDMIHRGLTPDIVTYNSLINGLCKMGHVQEASNLFNKLQSEG 652
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGK 112
I PD T++ LI C E M+ A + G P E S LI ++ K
Sbjct: 653 IRPDAITYNTLISRHCHEGMFNDACLLLYKGVDSGFIPNEVTWSILINYIVK 704
Score = 43.9 bits (102), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 36/150 (24%), Positives = 66/150 (44%), Gaps = 8/150 (5%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I A C+ G EE QL G+ K K D+ NS++ C+ ME + + +
Sbjct: 453 LICALCKDGNIEEALQLFGEMSGKGCKPDIYTFNSLINGLCKNHKMEEALSLYHDMFLEG 512
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ + T++ L+ F A++ + +M +G + + LI L K A + L
Sbjct: 513 VIANTVTYNTLVHAFLMRDSIQQAFKLVDEMLFRGCPLDNITYNGLIKALCKTGAVEKGL 572
Query: 121 SVYNMLRYSKRSMCKALHEKIL--HILISG 148
++ + + K + I+ +ILISG
Sbjct: 573 GLF------EEMLGKGIFPTIISCNILISG 596
Score = 42.7 bits (99), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 30/123 (24%), Positives = 55/123 (44%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
MI + G +L + AK + +V+ ++ +C+ G +E ++ +
Sbjct: 383 MIDGLVKKGYLVSALELLNEMVAKRFEPNVITYTILINGFCKQGRLEEAAEIVNSMSAKG 442
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+S + ++ LI CK+ A + +M KG +P+ +SLI L K EAL
Sbjct: 443 LSLNTVGYNCLICALCKDGNIEEALQLFGEMSGKGCKPDIYTFNSLINGLCKNHKMEEAL 502
Query: 121 SVY 123
S+Y
Sbjct: 503 SLY 505
Score = 42.0 bits (97), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 31/127 (24%), Positives = 59/127 (46%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ AF ++ +L + + D + N ++ A C+TG +E + + ++
Sbjct: 523 LVHAFLMRDSIQQAFKLVDEMLFRGCPLDNITYNGLIKALCKTGAVEKGLGLFEEMLGKG 582
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
I P + +ILI C+ A + + DM +G P+ +SLI L KM EA
Sbjct: 583 IFPTIISCNILISGLCRTGKVNDALKFLQDMIHRGLTPDIVTYNSLINGLCKMGHVQEAS 642
Query: 121 SVYNMLR 127
+++N L+
Sbjct: 643 NLFNKLQ 649
Score = 41.6 bits (96), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 24/107 (22%), Positives = 48/107 (44%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I A C++G E+ L + K ++ N ++ CRTG + + ++ +
Sbjct: 558 LIKALCKTGAVEKGLGLFEEMLGKGIFPTIISCNILISGLCRTGKVNDALKFLQDMIHRG 617
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLI 107
++PD T++ LI CK A + +G +P+ ++LI
Sbjct: 618 LTPDIVTYNSLINGLCKMGHVQEASNLFNKLQSEGIRPDAITYNTLI 664
Score = 37.4 bits (85), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 35/126 (27%), Positives = 54/126 (42%), Gaps = 3/126 (2%)
Query: 1 MISAFCRSGCFEETKQLAGD--FEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDE 58
+IS + SG FEE K L + A Y+ D N M+ + G + S + ++ ++
Sbjct: 347 LISGYVASGRFEEAKDLLYNNMVIAGYEP-DAYTFNIMIDGLVKKGYLVSALELLNEMVA 405
Query: 59 LAISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSE 118
P+ T+ ILI FCK+ A + M KG + LI L K E
Sbjct: 406 KRFEPNVITYTILINGFCKQGRLEEAAEIVNSMSAKGLSLNTVGYNCLICALCKDGNIEE 465
Query: 119 ALSVYN 124
AL ++
Sbjct: 466 ALQLFG 471
>gi|357473123|ref|XP_003606846.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355507901|gb|AES89043.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 624
Score = 52.4 bits (124), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 22/96 (22%), Positives = 55/96 (57%)
Query: 29 DVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYMLAYRTM 88
D+++ N+++ +C G+++ +++++D + PD TF+ L++ +C+E+ A + +
Sbjct: 461 DIIMFNALIDGHCVNGNIDRAFQLLKEMDNAKVVPDEVTFNTLMQGYCRERKVEEAKKLL 520
Query: 89 VDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVYN 124
+M +G +P+ ++LI K +AL V++
Sbjct: 521 DEMKERGIKPDHISYNTLISGYSKRGDMKDALEVFD 556
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 28/107 (26%), Positives = 49/107 (45%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
MI+ CR G +++ K G E K +VV N+++ YC G E+ + + + +
Sbjct: 223 MINILCREGKWKKAKDFIGHMEVYGVKPNVVTYNTVINGYCLRGKFEAASKIFKTMKDKN 282
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLI 107
+ PD T++ I CKE+ A + + G P ++LI
Sbjct: 283 LKPDCYTYNSFISRLCKERRIEEASGVLCKLLESGLVPNAVTYNALI 329
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 27/118 (22%), Positives = 58/118 (49%), Gaps = 3/118 (2%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ +CR EE K+L + + + K D + N+++ Y + GDM+ + V ++ L
Sbjct: 503 LMQGYCRERKVEEAKKLLDEMKERGIKPDHISYNTLISGYSKRGDMKDALEVFDEMLSLG 562
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSE 118
P T++ LI+ + K A + +M KG P++ S+ ++ + M+ + +
Sbjct: 563 FDPTLLTYNALIQGYSKIGEADHAEELLREMQSKGITPDD---STYLYVIEAMKTNDD 617
Score = 38.1 bits (87), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 23/98 (23%), Positives = 42/98 (42%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C +G + QL + + D V N+++ YCR +E ++ ++ E
Sbjct: 468 LIDGHCVNGNIDRAFQLLKEMDNAKVVPDEVTFNTLMQGYCRERKVEEAKKLLDEMKERG 527
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQP 98
I PD+ +++ LI + K A +M G P
Sbjct: 528 IKPDHISYNTLISGYSKRGDMKDALEVFDEMLSLGFDP 565
>gi|356577604|ref|XP_003556914.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At2g32630-like [Glycine max]
Length = 619
Score = 52.4 bits (124), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 30/107 (28%), Positives = 50/107 (46%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+IS C++G E + L + + K +VV+ N+M+ YC+ G M+ + ++
Sbjct: 328 LISGVCKAGQMEAAEILLEEMQCKGVDLNVVIFNTMMDGYCKRGMMDEAFRLQDIMERKG 387
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLI 107
D T++IL CK Y A R + M KG P C++ I
Sbjct: 388 FEADVFTYNILASGLCKLHRYEEAKRVLNVMVEKGVAPNVVTCATFI 434
Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 29/124 (23%), Positives = 57/124 (45%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+ S C+ +EE K++ K +VV + + YC+ G++ +R +++
Sbjct: 398 LASGLCKLHRYEEAKRVLNVMVEKGVAPNVVTCATFIEIYCQEGNLAEPERFLRNIEKRG 457
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ P+ T++ LI + K + A+ +M KG P+ +SLI + EAL
Sbjct: 458 VVPNIVTYNTLIDAYSKNEKVKQAHXLKAEMVEKGLLPDVFTYTSLIHGECIVDKVDEAL 517
Query: 121 SVYN 124
++N
Sbjct: 518 KLFN 521
Score = 40.0 bits (92), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 28/126 (22%), Positives = 55/126 (43%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
MIS CR+G L + + + +++ C+ G ME+ ++ ++
Sbjct: 293 MISWNCRAGNVRRASALFDEMICRGIVPNTXTFGALISGVCKAGQMEAAEILLEEMQCKG 352
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ + F+ ++ +CK M A+R M RKG + + + L L K+ + EA
Sbjct: 353 VDLNVVIFNTMMDGYCKRGMMDEAFRLQDIMERKGFEADVFTYNILASGLCKLHRYEEAK 412
Query: 121 SVYNML 126
V N++
Sbjct: 413 RVLNVM 418
Score = 38.1 bits (87), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 22/98 (22%), Positives = 43/98 (43%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
M+ +C+ G +E +L E K + DV N + C+ E V+ + E
Sbjct: 363 MMDGYCKRGMMDEAFRLQDIMERKGFEADVFTYNILASGLCKLHRYEEAKRVLNVMVEKG 422
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQP 98
++P+ T I+ +C+E R + ++ ++G P
Sbjct: 423 VAPNVVTCATFIEIYCQEGNLAEPERFLRNIEKRGVVP 460
>gi|296088922|emb|CBI38482.3| unnamed protein product [Vitis vinifera]
Length = 368
Score = 52.4 bits (124), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 48/100 (48%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ CR+G + + D + D+V NS++ C+TG + +++ KL
Sbjct: 251 LINGLCRTGNIQHALEFLRDMIHRGLTPDIVTYNSLINGLCKTGRAQEALNLFDKLQVEG 310
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEE 100
I PD T++ LI + CKE M+ A+ + G P E
Sbjct: 311 ICPDAITYNTLISWHCKEGMFDDAHLLLSRGVDSGFIPNE 350
>gi|308082018|ref|NP_001183846.1| uncharacterized protein LOC100502439 [Zea mays]
gi|238014984|gb|ACR38527.1| unknown [Zea mays]
gi|414872746|tpg|DAA51303.1| TPA: hypothetical protein ZEAMMB73_971718 [Zea mays]
Length = 623
Score = 52.4 bits (124), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 34/147 (23%), Positives = 69/147 (46%), Gaps = 2/147 (1%)
Query: 15 KQLAGDFEA--KYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILI 72
K+ G F+A D N+++ +C+ ++ M++++ SP T+ LI
Sbjct: 284 KRARGAFQALKGTIPPDESSFNTLVHGWCKARMLKEARETMKEMERHGFSPSVTTYTCLI 343
Query: 73 KYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVYNMLRYSKRS 132
+ +C EK + + +MH KG P + ++ LGK EAL ++ ++ +
Sbjct: 344 EAYCMEKDFQTVDGILDEMHTKGCTPNIITYTIVMHALGKAGRTQEALDTFDKVKQDGCA 403
Query: 133 MCKALHEKILHILISGKLLKDAYIVVK 159
+ + + +++IL L+DA VV+
Sbjct: 404 LDASFYNCLIYILCRAGRLQDANFVVE 430
Score = 38.9 bits (89), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 18/71 (25%), Positives = 32/71 (45%)
Query: 29 DVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYMLAYRTM 88
D N ++ CR G ++ V+ ++ ISP+ TF+ LI C + A + +
Sbjct: 405 DASFYNCLIYILCRAGRLQDANFVVEEMHRTGISPNLTTFNTLISAACDHSLAENALKLL 464
Query: 89 VDMHRKGHQPE 99
V M + P+
Sbjct: 465 VQMEEQSCNPD 475
Score = 35.8 bits (81), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 20/99 (20%), Positives = 45/99 (45%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I CR+G ++ + + ++ N+++ A C E+ + ++ +++E +
Sbjct: 412 LIYILCRAGRLQDANFVVEEMHRTGISPNLTTFNTLISAACDHSLAENALKLLVQMEEQS 471
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPE 99
+PD T+ L+K C+ K + M RK P+
Sbjct: 472 CNPDIKTYTPLLKLCCRRKWVKTLLFLICHMFRKDITPD 510
>gi|356540373|ref|XP_003538664.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g13600-like [Glycine max]
Length = 881
Score = 52.4 bits (124), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 28/113 (24%), Positives = 58/113 (51%), Gaps = 15/113 (13%)
Query: 29 DVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYMLAYRTM 88
D + NS++ + + G+++ + + +K+ + + P+ T++ LIK+ CKE +M A+
Sbjct: 258 DTHICNSIIDTFGKYGELDEALKLFKKMQKEGVRPNIVTWNSLIKWHCKEGDFMKAFHLF 317
Query: 89 VDMHRKGHQPEEELCSSLIFHLG---------------KMRAHSEALSVYNML 126
DM +G P+ ++ ++I LG K+R + E +VY +L
Sbjct: 318 TDMQEQGLYPDPKIFVTIISCLGEQGKWDIIKKYFESMKIRGNKEYGAVYAVL 370
Score = 37.7 bits (86), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 23/99 (23%), Positives = 46/99 (46%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+ +A+ + G E+ + EA+ + ++V+LN ++ A+ G + V + E
Sbjct: 405 LANAYAQQGLCEQVIMVLQIMEAEGIEPNIVMLNMLINAFGNAGRYMEAISVYHHIKESG 464
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPE 99
+SPD T+ L+K F + K + +M G P+
Sbjct: 465 VSPDVVTYTTLMKAFIRAKKFDEVPIIYKEMENDGCTPD 503
>gi|255582955|ref|XP_002532248.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223528066|gb|EEF30142.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 521
Score = 52.4 bits (124), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 23/95 (24%), Positives = 53/95 (55%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+++ FC+ G EE K++ + ++ K D V +++ +C G ++ M +++++ E+
Sbjct: 312 LMNGFCKEGRLEEAKEVFDEMKSSGLKPDTVGYTTLINCFCGVGRIDEAMELLKEMTEMK 371
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKG 95
D TF++L+K C+E + A R + ++ +G
Sbjct: 372 CKADAVTFNVLLKGLCREGRFDEALRMLENLAYEG 406
>gi|115455297|ref|NP_001051249.1| Os03g0746400 [Oryza sativa Japonica Group]
gi|113549720|dbj|BAF13163.1| Os03g0746400, partial [Oryza sativa Japonica Group]
Length = 613
Score = 52.4 bits (124), Expect = 6e-05, Method: Composition-based stats.
Identities = 31/128 (24%), Positives = 64/128 (50%), Gaps = 2/128 (1%)
Query: 33 LNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYMLAYRTMVDMH 92
N+++ +C+ ++ + M ++ + SP T+ L++ +C EK + Y ++D
Sbjct: 332 FNTLVHGWCKARMLKEALDTMEEMKQHGFSPSVVTYTSLVEAYCMEKDFQTVY-ALLDEM 390
Query: 93 RKGHQPEEELCSSLIFH-LGKMRAHSEALSVYNMLRYSKRSMCKALHEKILHILISGKLL 151
RK P + +++ H LGK EAL ++ L+ + + + +++IL L
Sbjct: 391 RKRRCPPNVVTYTILMHALGKAGRTREALDTFDKLKEDGVAPDASFYNSLIYILGRAGRL 450
Query: 152 KDAYIVVK 159
+DAY VV+
Sbjct: 451 EDAYSVVE 458
Score = 40.0 bits (92), Expect = 0.35, Method: Composition-based stats.
Identities = 28/127 (22%), Positives = 55/127 (43%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ +C++ +E + + VV S++ AYC D ++V ++ ++ +
Sbjct: 335 LVHGWCKARMLKEALDTMEEMKQHGFSPSVVTYTSLVEAYCMEKDFQTVYALLDEMRKRR 394
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
P+ T+ IL+ K A T + G P+ +SLI+ LG+ +A
Sbjct: 395 CPPNVVTYTILMHALGKAGRTREALDTFDKLKEDGVAPDASFYNSLIYILGRAGRLEDAY 454
Query: 121 SVYNMLR 127
SV +R
Sbjct: 455 SVVEEMR 461
Score = 39.7 bits (91), Expect = 0.37, Method: Composition-based stats.
Identities = 22/99 (22%), Positives = 45/99 (45%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I R+G E+ + + +V N+++ A C E+ + ++ K++E +
Sbjct: 440 LIYILGRAGRLEDAYSVVEEMRTTGIAPNVTTFNTLISAACDHSQAENALKLLVKMEEQS 499
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPE 99
+PD T+ L+K CK + + + M RK P+
Sbjct: 500 CNPDIKTYTPLLKLCCKRQWVKILLFLVCHMFRKDISPD 538
>gi|403366299|gb|EJY82949.1| hypothetical protein OXYTRI_19434 [Oxytricha trifallax]
Length = 1420
Score = 52.4 bits (124), Expect = 6e-05, Method: Composition-based stats.
Identities = 29/98 (29%), Positives = 48/98 (48%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
MI FCR ++ + D E D VL NS+L C+ ++E + V + ++ L
Sbjct: 885 MIKGFCREKNIQQALIMLNDMEKNNIMADEVLYNSLLDGCCKANEIEMALKVYKNMEILK 944
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQP 98
I P T+ ILIK + K++ A + +M + G +P
Sbjct: 945 IKPSNVTYSILIKIYGKQRNLPKALGVLEEMKKDGIRP 982
Score = 36.6 bits (83), Expect = 3.5, Method: Composition-based stats.
Identities = 27/102 (26%), Positives = 44/102 (43%), Gaps = 2/102 (1%)
Query: 31 VLLNSMLCAYCRTGDMESVMHVMRKLDE--LAISPDYNTFHILIKYFCKEKMYMLAYRTM 88
V NS++ R ++ M + ++ + PD T+ +IK FC+EK A +
Sbjct: 843 VTFNSLIDCCIRCNSIKKAMEIFEEMKQPISHTKPDLITYSTMIKGFCREKNIQQALIML 902
Query: 89 VDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVYNMLRYSK 130
DM + +E L +SL+ K AL VY + K
Sbjct: 903 NDMEKNNIMADEVLYNSLLDGCCKANEIEMALKVYKNMEILK 944
Score = 36.2 bits (82), Expect = 4.9, Method: Composition-based stats.
Identities = 32/144 (22%), Positives = 62/144 (43%), Gaps = 5/144 (3%)
Query: 11 FEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHI 70
FEE KQ + K D++ ++M+ +CR +++ + ++ +++ I D ++
Sbjct: 865 FEEMKQ-----PISHTKPDLITYSTMIKGFCREKNIQQALIMLNDMEKNNIMADEVLYNS 919
Query: 71 LIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVYNMLRYSK 130
L+ CK +A + +M +P S LI GK R +AL V ++
Sbjct: 920 LLDGCCKANEIEMALKVYKNMEILKIKPSNVTYSILIKIYGKQRNLPKALGVLEEMKKDG 979
Query: 131 RSMCKALHEKILHILISGKLLKDA 154
++ +L I + LK A
Sbjct: 980 IRPGLIVYTCLLQTCIKSRQLKTA 1003
>gi|358346916|ref|XP_003637510.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355503445|gb|AES84648.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 718
Score = 52.4 bits (124), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 39/154 (25%), Positives = 71/154 (46%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+IS C+ G FE+ ++ + + V N+++ A C+ ++E+ + R L
Sbjct: 304 LISGMCKLGEFEKAIEILQQMILRECSPNTVTYNTLISALCKENEIEAATDLARILVSKG 363
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ PD TF+ LI+ C K +A +M KG +P+E S LI L R EAL
Sbjct: 364 LLPDVCTFNTLIQGLCLSKNQDIAMEMFEEMKNKGCKPDEFTYSILIDSLCYERRLKEAL 423
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLKDA 154
+ + S + ++ ++ L + ++DA
Sbjct: 424 MLLKEMESSGCARNAVVYNTLIDGLCKSRRIEDA 457
Score = 44.7 bits (104), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 42/95 (44%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C++ EE QL + K D NS+L +CR GD+E +++ +
Sbjct: 479 LIDGLCKNKRVEEASQLMDQMIMEGLKPDKFTYNSLLTYFCRVGDIEKAGDIVQTMASNG 538
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKG 95
PD T+ LI C+ +A + + + KG
Sbjct: 539 CEPDIFTYGTLIGGLCRAGRVDVASKLLRSVQMKG 573
Score = 44.7 bits (104), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 20/77 (25%), Positives = 38/77 (49%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+++ FC+ G EE + + + D V NS++ +CR G++ + ++ + E
Sbjct: 234 LVNGFCKEGRVEEALRFVLEVSEEGFSPDQVTFNSLVNGFCRIGNVNDALDIVDFMIEKG 293
Query: 61 ISPDYNTFHILIKYFCK 77
PD T++ LI CK
Sbjct: 294 FDPDVYTYNSLISGMCK 310
Score = 42.7 bits (99), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 27/101 (26%), Positives = 48/101 (47%), Gaps = 4/101 (3%)
Query: 1 MISAFCRSGCFEETKQLAGDF--EAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDE 58
+++ FCR G + + DF E +D DV NS++ C+ G+ E + +++++
Sbjct: 269 LVNGFCRIGNVNDALDIV-DFMIEKGFDP-DVYTYNSLISGMCKLGEFEKAIEILQQMIL 326
Query: 59 LAISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPE 99
SP+ T++ LI CKE A + KG P+
Sbjct: 327 RECSPNTVTYNTLISALCKENEIEAATDLARILVSKGLLPD 367
Score = 41.2 bits (95), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 34/154 (22%), Positives = 64/154 (41%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+ISA C+ E LA +K DV N+++ C + + + M + ++
Sbjct: 339 LISALCKENEIEAATDLARILVSKGLLPDVCTFNTLIQGLCLSKNQDIAMEMFEEMKNKG 398
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
PD T+ ILI C E+ A + +M G + ++LI L K R +A
Sbjct: 399 CKPDEFTYSILIDSLCYERRLKEALMLLKEMESSGCARNAVVYNTLIDGLCKSRRIEDAE 458
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLKDA 154
+++ + S + ++ L K +++A
Sbjct: 459 EIFDQMELLGVSRSSVTYNTLIDGLCKNKRVEEA 492
Score = 38.1 bits (87), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 32/135 (23%), Positives = 58/135 (42%), Gaps = 16/135 (11%)
Query: 36 MLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKG 95
++ +C+ G +E + + ++ E SPD TF+ L+ FC+ A + M KG
Sbjct: 234 LVNGFCKEGRVEEALRFVLEVSEEGFSPDQVTFNSLVNGFCRIGNVNDALDIVDFMIEKG 293
Query: 96 HQPEEELCSSLIFHLGKMRAHSEALSVY----------NMLRYSK--RSMCK----ALHE 139
P+ +SLI + K+ +A+ + N + Y+ ++CK
Sbjct: 294 FDPDVYTYNSLISGMCKLGEFEKAIEILQQMILRECSPNTVTYNTLISALCKENEIEAAT 353
Query: 140 KILHILISGKLLKDA 154
+ IL+S LL D
Sbjct: 354 DLARILVSKGLLPDV 368
Score = 35.8 bits (81), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 24/107 (22%), Positives = 51/107 (47%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I + C +E L + E+ + V+ N+++ C++ +E + +++ L
Sbjct: 409 LIDSLCYERRLKEALMLLKEMESSGCARNAVVYNTLIDGLCKSRRIEDAEEIFDQMELLG 468
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLI 107
+S T++ LI CK K A + M M +G +P++ +SL+
Sbjct: 469 VSRSSVTYNTLIDGLCKNKRVEEASQLMDQMIMEGLKPDKFTYNSLL 515
Score = 35.0 bits (79), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 21/99 (21%), Positives = 43/99 (43%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C+S E+ +++ E V N+++ C+ +E +M ++
Sbjct: 444 LIDGLCKSRRIEDAEEIFDQMELLGVSRSSVTYNTLIDGLCKNKRVEEASQLMDQMIMEG 503
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPE 99
+ PD T++ L+ YFC+ A + M G +P+
Sbjct: 504 LKPDKFTYNSLLTYFCRVGDIEKAGDIVQTMASNGCEPD 542
>gi|302821741|ref|XP_002992532.1| hypothetical protein SELMODRAFT_135367 [Selaginella moellendorffii]
gi|300139734|gb|EFJ06470.1| hypothetical protein SELMODRAFT_135367 [Selaginella moellendorffii]
Length = 759
Score = 52.4 bits (124), Expect = 7e-05, Method: Composition-based stats.
Identities = 32/122 (26%), Positives = 57/122 (46%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
M+ R G F+E + E D+V N++L +Y + G M ++ ++ +
Sbjct: 336 MVDIHARLGNFDEAHSIRRAMEEAGFAKDIVTYNALLDSYGKQGKFREAMSLLEEMKQRG 395
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
SP+ T+ LI +CK + A D+ + G QP+ L S+L+ K + EAL
Sbjct: 396 ASPNILTYSALIDAYCKHGFHRDAMALFQDVKKAGLQPDVVLYSTLVDGCCKNGSPDEAL 455
Query: 121 SV 122
++
Sbjct: 456 AL 457
Score = 38.1 bits (87), Expect = 1.1, Method: Composition-based stats.
Identities = 28/109 (25%), Positives = 55/109 (50%), Gaps = 5/109 (4%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAK--YDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDE 58
+I A+ RSG + ++ FEA K ++V+ N+++ A + GD + + + R++ E
Sbjct: 161 LICAYGRSGKLAKAVEI---FEAMKVVCKPNLVVYNAVIDACSKGGDYPTALRIFREMLE 217
Query: 59 LAISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLI 107
+SPD TF+ LI + + R +M +G ++ ++LI
Sbjct: 218 QGMSPDRITFNTLISAAGRANRWEECDRIFAEMEERGIARDDVTYNTLI 266
Score = 37.7 bits (86), Expect = 1.8, Method: Composition-based stats.
Identities = 30/115 (26%), Positives = 50/115 (43%), Gaps = 23/115 (20%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDME---SVMHVMRKLD 57
+ISA R+ +EE ++ + E + D V N+++ YCR G M ++M M K
Sbjct: 230 LISAAGRANRWEECDRIFAEMEERGIARDDVTYNTLIATYCRGGQMHLGAALMETMAK-- 287
Query: 58 ELAISPDYNTFHILIKYFCK-----EKMYM-------------LAYRTMVDMHRK 94
I P T+ +I + K E + + + Y TMVD+H +
Sbjct: 288 SSGIEPSVITYSTMIDGYAKLGLAHEAIALFQEMRNQNVEPDGICYNTMVDIHAR 342
Score = 35.4 bits (80), Expect = 7.7, Method: Composition-based stats.
Identities = 22/100 (22%), Positives = 48/100 (48%), Gaps = 11/100 (11%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I A+C+ G + L D + + DVVL ++++ C+ G + + ++ ++ +
Sbjct: 406 LIDAYCKHGFHRDAMALFQDVKKAGLQPDVVLYSTLVDGCCKNGSPDEALALLEEMADNG 465
Query: 61 ISPDYNTFHILI-----------KYFCKEKMYMLAYRTMV 89
I P+ T++ L+ K F K + ++L TM+
Sbjct: 466 IRPNVITYNSLLDAYGRQCLMVRKTFPKLRFFLLPRVTML 505
>gi|302761054|ref|XP_002963949.1| hypothetical protein SELMODRAFT_166434 [Selaginella moellendorffii]
gi|300167678|gb|EFJ34282.1| hypothetical protein SELMODRAFT_166434 [Selaginella moellendorffii]
Length = 1365
Score = 52.4 bits (124), Expect = 7e-05, Method: Composition-based stats.
Identities = 28/123 (22%), Positives = 61/123 (49%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+++ + R + ++L D + + D+ + N M+ Y + G + V + + E+
Sbjct: 792 LLALYSRETVEIDAEELVKDIKKAGLELDIDIYNHMISLYSKLGSYRNAALVFKGMQEIG 851
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
SPD TF+ LI + + +M A + +M + G+ P ++LI G+++A+ +A
Sbjct: 852 CSPDATTFNTLIMLYSRNQMVQEAQALLREMIKTGNAPNISTYTTLISAYGRLQAYEDAE 911
Query: 121 SVY 123
V+
Sbjct: 912 LVF 914
Score = 39.7 bits (91), Expect = 0.43, Method: Composition-based stats.
Identities = 24/107 (22%), Positives = 47/107 (43%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++SA+ +G FE + + A + + N +L A+ R G + + ++L E+
Sbjct: 687 LLSAYAETGNFERATRALDNMVAAGLQPNATCANYVLEAFGRAGKAKEISEFFQRLPEMG 746
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLI 107
ISP+ TF ++ F + A M G P ++ +L+
Sbjct: 747 ISPNSRTFVVIFHAFSRNGNLEEARSMYRQMKEAGFSPSIQVFKALL 793
Score = 39.7 bits (91), Expect = 0.46, Method: Composition-based stats.
Identities = 33/132 (25%), Positives = 54/132 (40%), Gaps = 1/132 (0%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ AF R G EE +++ G D + N+M+ Y + G + ++ E
Sbjct: 272 VLHAFARDGRIEEVERIRGMMRDARCSSDEITYNTMIHMYGKAGMHRKAEELYVQMKEEG 331
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
PD TF +LI K A DM + +P + S++I K ++A
Sbjct: 332 RCPDSVTFTVLIDTLGKAGFVNEAAAMFEDMLKSQVRPTLQAFSAMICAYAKADMFTDAE 391
Query: 121 SVYN-MLRYSKR 131
Y+ MLR R
Sbjct: 392 HTYSCMLRAGVR 403
Score = 39.3 bits (90), Expect = 0.56, Method: Composition-based stats.
Identities = 24/79 (30%), Positives = 42/79 (53%), Gaps = 1/79 (1%)
Query: 30 VVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYM-LAYRTM 88
V + NS++ Y R GD SV ++ ++ + PD TF+I+IK + M LA +
Sbjct: 125 VQVYNSLMSVYARHGDWNSVQQLLCRMQDRGCRPDLVTFNIVIKARTRGGMQEGLASSLL 184
Query: 89 VDMHRKGHQPEEELCSSLI 107
D++ G +P+ ++LI
Sbjct: 185 QDVYAAGLRPDTITYNTLI 203
Score = 38.1 bits (87), Expect = 1.3, Method: Composition-based stats.
Identities = 24/104 (23%), Positives = 48/104 (46%), Gaps = 2/104 (1%)
Query: 29 DVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYMLAYRTM 88
D+ N+M+ Y R G +E+ + R + E +PD T++ ++ F ++ R +
Sbjct: 230 DIWTYNAMISVYGRAGRVEAASSIFRIMQEQGFTPDAVTYNSVLHAFARDGRIEEVER-I 288
Query: 89 VDMHRKGHQPEEELCSSLIFHL-GKMRAHSEALSVYNMLRYSKR 131
M R +E+ + + H+ GK H +A +Y ++ R
Sbjct: 289 RGMMRDARCSSDEITYNTMIHMYGKAGMHRKAEELYVQMKEEGR 332
Score = 35.4 bits (80), Expect = 7.6, Method: Composition-based stats.
Identities = 18/89 (20%), Positives = 44/89 (49%)
Query: 39 AYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQP 98
A+ R G++E + R++ E SP F L+ + +E + + A + D+ + G +
Sbjct: 760 AFSRNGNLEEARSMYRQMKEAGFSPSIQVFKALLALYSRETVEIDAEELVKDIKKAGLEL 819
Query: 99 EEELCSSLIFHLGKMRAHSEALSVYNMLR 127
+ ++ + +I K+ ++ A V+ ++
Sbjct: 820 DIDIYNHMISLYSKLGSYRNAALVFKGMQ 848
>gi|359485848|ref|XP_002267947.2| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
mitochondrial-like [Vitis vinifera]
Length = 1011
Score = 52.4 bits (124), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 23/98 (23%), Positives = 52/98 (53%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I F R G E+ ++ + A + ++++ N++L C+ G ME + +M+++ E
Sbjct: 326 LIDGFMRQGDIEQAFRIKDEMVACGIEANLIIWNTLLNGVCKAGKMEKALEIMQEMMEKG 385
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQP 98
+ PD T+ +LI+ C+ + A+ + +M ++ P
Sbjct: 386 VEPDSQTYSLLIEGHCRGQNMARAFELLDEMKKRKLAP 423
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/107 (28%), Positives = 54/107 (50%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
MISA C+ G ++ K++ + K ++V N ++ CR ++ + + R + +
Sbjct: 221 MISAHCKVGNVKDAKRVLLEMGEKGCSPNLVTYNVIIGGLCRARLLDEAIELKRSMVDKG 280
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLI 107
+ PD T+ ILI FC EK A +++M G +PE ++LI
Sbjct: 281 LVPDLYTYDILINGFCMEKRSREAKLMLLEMIDVGLKPEPITYNALI 327
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/99 (22%), Positives = 50/99 (50%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+IS C+ G ++ QL + K D+V N ++ C+ G++E ++ ++
Sbjct: 641 LISGSCKQGNVDKASQLLEEMCIKGINPDIVTYNILIDGLCKAGEIERAKNLFDDIEGRG 700
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPE 99
++P+ T+ ++ +CK K A++ + +M +G P+
Sbjct: 701 LTPNCVTYAAMVDGYCKSKNPTAAFQLLEEMLLRGVPPD 739
Score = 45.1 bits (105), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 21/95 (22%), Positives = 46/95 (48%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C++G E K L D E + + V +M+ YC++ + + ++ ++
Sbjct: 676 LIDGLCKAGEIERAKNLFDDIEGRGLTPNCVTYAAMVDGYCKSKNPTAAFQLLEEMLLRG 735
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKG 95
+ PD +++++ + CKE+ + A +M KG
Sbjct: 736 VPPDAFIYNVILNFCCKEEKFEKALDLFQEMLEKG 770
Score = 42.7 bits (99), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 30/110 (27%), Positives = 55/110 (50%), Gaps = 6/110 (5%)
Query: 1 MISAFCRSGCFEETKQLAGD-FEAKYDK--YDVVLLNSMLCAYCRTGDMESVMHVMRKLD 57
+I FC C EE + A D F+ +K V N+++ YC++G ++ H++ ++
Sbjct: 745 VILNFC---CKEEKFEKALDLFQEMLEKGFASTVSFNTLIEGYCKSGKLQEANHLLEEMI 801
Query: 58 ELAISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLI 107
E P++ T+ LI + CK M A R ++M + P + +SL+
Sbjct: 802 EKQFIPNHVTYTSLIDHNCKAGMMGEAKRLWLEMQERNVMPTAKTYTSLL 851
Score = 39.7 bits (91), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 23/98 (23%), Positives = 47/98 (47%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ CR G + T + + K + V+ +++ A+ + G +E ++ ++ E
Sbjct: 431 IINGLCRCGNLQGTNAILREMVMNGLKPNAVVYTTLMTAHAKEGRVEESRMILERMREQG 490
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQP 98
I PD ++ LI FCK K A +++M + +P
Sbjct: 491 ILPDVFCYNSLIIGFCKAKRMEEARTYLMEMLERRLRP 528
Score = 38.9 bits (89), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 22/98 (22%), Positives = 43/98 (43%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I R+G E + + + K + NS++ C+ G+++ ++ ++
Sbjct: 606 LIHGLSRNGKMHEAFGIFSELQEKGLLPNAFTYNSLISGSCKQGNVDKASQLLEEMCIKG 665
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQP 98
I+PD T++ILI CK A D+ +G P
Sbjct: 666 INPDIVTYNILIDGLCKAGEIERAKNLFDDIEGRGLTP 703
Score = 38.9 bits (89), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 41/74 (55%), Gaps = 6/74 (8%)
Query: 29 DVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYMLAY--- 85
DV +M+ A+C+ G+++ V+ ++ E SP+ T++++I C+ ++ A
Sbjct: 214 DVYTYTNMISAHCKVGNVKDAKRVLLEMGEKGCSPNLVTYNVIIGGLCRARLLDEAIELK 273
Query: 86 RTMVDMHRKGHQPE 99
R+MVD KG P+
Sbjct: 274 RSMVD---KGLVPD 284
Score = 36.6 bits (83), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 31/129 (24%), Positives = 55/129 (42%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C++G E K+L + + + S+L Y G+M V + ++
Sbjct: 815 LIDHNCKAGMMGEAKRLWLEMQERNVMPTAKTYTSLLHGYHNIGNMSEVSALFEEMVAKG 874
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
I PD T++++I +C+E M A + ++ KG +LI L K E L
Sbjct: 875 IEPDKMTYYVMIDAYCREGNVMEACKLKDEILVKGMPMSVAAYDALIQALCKKEEFFEVL 934
Query: 121 SVYNMLRYS 129
+ N + S
Sbjct: 935 KLLNEIGES 943
Score = 35.0 bits (79), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 24/107 (22%), Positives = 46/107 (42%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ FC E K + + K + + N+++ + R GD+E + ++
Sbjct: 291 LINGFCMEKRSREAKLMLLEMIDVGLKPEPITYNALIDGFMRQGDIEQAFRIKDEMVACG 350
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLI 107
I + ++ L+ CK A M +M KG +P+ + S LI
Sbjct: 351 IEANLIIWNTLLNGVCKAGKMEKALEIMQEMMEKGVEPDSQTYSLLI 397
>gi|356528166|ref|XP_003532676.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At2g02150-like [Glycine max]
Length = 852
Score = 52.4 bits (124), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 30/107 (28%), Positives = 52/107 (48%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I R G E + L + +AK + D+V NS++ Y + G + + V ++ +
Sbjct: 257 VIGCLAREGDLEAARSLFEEMKAKGLRPDIVTYNSLIDGYGKVGMLTGAVSVFEEMKDAG 316
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLI 107
PD T++ LI FCK + A+ + M ++G QP S+LI
Sbjct: 317 CEPDVITYNSLINCFCKFERIPQAFEYLHGMKQRGLQPNVVTYSTLI 363
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 40/79 (50%)
Query: 29 DVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYMLAYRTM 88
DV+ NS++ +C+ + + + + + P+ T+ LI FCK M + A +
Sbjct: 320 DVITYNSLINCFCKFERIPQAFEYLHGMKQRGLQPNVVTYSTLIDAFCKAGMLLEANKFF 379
Query: 89 VDMHRKGHQPEEELCSSLI 107
VDM R G QP E +SLI
Sbjct: 380 VDMIRVGLQPNEFTYTSLI 398
Score = 43.1 bits (100), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 29/124 (23%), Positives = 59/124 (47%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C++ C EE K L + K D ++ S++ + G+ + + ++ E+
Sbjct: 607 LIDGLCKNDCLEEAKNLFNEMLDKGISPDKLVYTSLIDGNMKHGNPGEALSLRNRMVEIG 666
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ D + LI F + LA + +M RKG P++ LC L+ ++ +EAL
Sbjct: 667 MELDLCAYTSLIWGFSRYGQVQLAKSLLDEMLRKGIIPDQVLCICLLRKYYELGDINEAL 726
Query: 121 SVYN 124
++++
Sbjct: 727 ALHD 730
Score = 40.0 bits (92), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 24/91 (26%), Positives = 45/91 (49%)
Query: 34 NSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHR 93
+++ AY + G +++++++ +L I T+ +LI CK + A R M R
Sbjct: 535 TTLIDAYFKVGKTTEAVNLLQEMQDLGIKITVVTYGVLIDGLCKIGLVQQAVRYFDHMTR 594
Query: 94 KGHQPEEELCSSLIFHLGKMRAHSEALSVYN 124
G QP + ++LI L K EA +++N
Sbjct: 595 NGLQPNIMIYTALIDGLCKNDCLEEAKNLFN 625
>gi|302816960|ref|XP_002990157.1| hypothetical protein SELMODRAFT_131102 [Selaginella moellendorffii]
gi|300142012|gb|EFJ08717.1| hypothetical protein SELMODRAFT_131102 [Selaginella moellendorffii]
Length = 760
Score = 52.4 bits (124), Expect = 7e-05, Method: Composition-based stats.
Identities = 32/122 (26%), Positives = 57/122 (46%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
M+ R G F+E + E D+V N++L +Y + G M ++ ++ +
Sbjct: 337 MVDIHARLGNFDEAHSIRRAMEEAGFAKDIVTYNALLDSYGKQGKFREAMSLLEEMKQRG 396
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
SP+ T+ LI +CK + A D+ + G QP+ L S+L+ K + EAL
Sbjct: 397 ASPNILTYSALIDAYCKHGFHRDAMALFQDVKKAGLQPDVVLYSTLVDGCCKNGSPDEAL 456
Query: 121 SV 122
++
Sbjct: 457 AL 458
Score = 38.1 bits (87), Expect = 1.1, Method: Composition-based stats.
Identities = 28/109 (25%), Positives = 55/109 (50%), Gaps = 5/109 (4%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAK--YDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDE 58
+I A+ RSG + ++ FEA K ++V+ N+++ A + GD + + + R++ E
Sbjct: 162 LICAYGRSGKLAKAVEI---FEAMKVVCKPNLVVYNAVIDACSKGGDYPTALRIFREMLE 218
Query: 59 LAISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLI 107
+SPD TF+ LI + + R +M +G ++ ++LI
Sbjct: 219 QGMSPDRITFNTLISAAGRANRWEECDRIFAEMEERGIARDDVTYNTLI 267
Score = 37.4 bits (85), Expect = 1.8, Method: Composition-based stats.
Identities = 30/115 (26%), Positives = 50/115 (43%), Gaps = 23/115 (20%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDME---SVMHVMRKLD 57
+ISA R+ +EE ++ + E + D V N+++ YCR G M ++M M K
Sbjct: 231 LISAAGRANRWEECDRIFAEMEERGIARDDVTYNTLIATYCRGGQMHLGAALMETMAK-- 288
Query: 58 ELAISPDYNTFHILIKYFCK-----EKMYM-------------LAYRTMVDMHRK 94
I P T+ +I + K E + + + Y TMVD+H +
Sbjct: 289 SSGIEPSVITYSTMIDGYAKLGLAHEAIALFQEMRNQNVEPDGICYNTMVDIHAR 343
Score = 35.4 bits (80), Expect = 8.8, Method: Composition-based stats.
Identities = 22/100 (22%), Positives = 48/100 (48%), Gaps = 11/100 (11%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I A+C+ G + L D + + DVVL ++++ C+ G + + ++ ++ +
Sbjct: 407 LIDAYCKHGFHRDAMALFQDVKKAGLQPDVVLYSTLVDGCCKNGSPDEALALLEEMADNG 466
Query: 61 ISPDYNTFHILI-----------KYFCKEKMYMLAYRTMV 89
I P+ T++ L+ K F K + ++L TM+
Sbjct: 467 IRPNVITYNSLLDAYGRQCLMVRKNFPKLRFFLLPRVTML 506
>gi|357159753|ref|XP_003578548.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At4g17915-like [Brachypodium distachyon]
Length = 460
Score = 52.0 bits (123), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 37/154 (24%), Positives = 68/154 (44%)
Query: 2 ISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAI 61
++A CRSG E + + D DVV N++L A+CR +++ V+R++ E +
Sbjct: 17 LAALCRSGSLERAESVLIDAILLGMPPDVVTYNTLLAAHCRAAGLDAGFAVLRRMREAGV 76
Query: 62 SPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEALS 121
P+ T++ LI + + M A +M R G P+ + L+ L + +A
Sbjct: 77 WPNAVTYNSLIVAASRVGLTMRALDLFDEMLRAGIAPDAWSYNVLMHCLFRSGHPEDAYR 136
Query: 122 VYNMLRYSKRSMCKALHEKILHILISGKLLKDAY 155
V+ + + C + +L L +AY
Sbjct: 137 VFADMAEKGVTPCTTTYNTLLDGLFKAGHATNAY 170
Score = 40.8 bits (94), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 29/126 (23%), Positives = 53/126 (42%)
Query: 32 LLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYMLAYRTMVDM 91
L+N L A CR+G +E V+ L + PD T++ L+ C+ + + M
Sbjct: 12 LMNVCLAALCRSGSLERAESVLIDAILLGMPPDVVTYNTLLAAHCRAAGLDAGFAVLRRM 71
Query: 92 HRKGHQPEEELCSSLIFHLGKMRAHSEALSVYNMLRYSKRSMCKALHEKILHILISGKLL 151
G P +SLI ++ AL +++ + + + + ++H L
Sbjct: 72 REAGVWPNAVTYNSLIVAASRVGLTMRALDLFDEMLRAGIAPDAWSYNVLMHCLFRSGHP 131
Query: 152 KDAYIV 157
+DAY V
Sbjct: 132 EDAYRV 137
>gi|357115308|ref|XP_003559432.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22670,
mitochondrial-like [Brachypodium distachyon]
Length = 570
Score = 52.0 bits (123), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 38/152 (25%), Positives = 71/152 (46%), Gaps = 14/152 (9%)
Query: 9 GCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTF 68
G F+E + + E+ + N+++ +C+ + M++++E SP T+
Sbjct: 251 GVFQELRGVVPPDESSF--------NTLVHGWCQARMLNEARDTMKEMEEHGFSPSVITY 302
Query: 69 HILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVYNMLRY 128
LI+ +C EK + Y + +M KG +P + ++ LGK EAL V++ +
Sbjct: 303 TSLIEAYCMEKDFQTVYAILNEMCSKGCRPNVITYTIVMHALGKAGRTQEALDVFDKV-- 360
Query: 129 SKRSMC---KALHEKILHILISGKLLKDAYIV 157
KR C + + I++IL L+DA V
Sbjct: 361 -KRDGCVPDASFYNSIIYILGRAGRLEDANSV 391
Score = 38.9 bits (89), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 25/124 (20%), Positives = 54/124 (43%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ +C++ E + + E V+ S++ AYC D ++V ++ ++
Sbjct: 270 LVHGWCQARMLNEARDTMKEMEEHGFSPSVITYTSLIEAYCMEKDFQTVYAILNEMCSKG 329
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
P+ T+ I++ K A + R G P+ +S+I+ LG+ +A
Sbjct: 330 CRPNVITYTIVMHALGKAGRTQEALDVFDKVKRDGCVPDASFYNSIIYILGRAGRLEDAN 389
Query: 121 SVYN 124
SV++
Sbjct: 390 SVFD 393
Score = 38.9 bits (89), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 19/70 (27%), Positives = 35/70 (50%)
Query: 30 VVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYMLAYRTMV 89
V + N+M+ A C E+ + ++ K++E + PD T+ L+K CK + + +
Sbjct: 404 VAIFNTMISAACDHSQAENALKILVKMEEQSCKPDIKTYTPLLKLCCKRQWMKILPFLIC 463
Query: 90 DMHRKGHQPE 99
M RK P+
Sbjct: 464 HMFRKDISPD 473
Score = 35.0 bits (79), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 31/121 (25%), Positives = 54/121 (44%), Gaps = 8/121 (6%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMES----VMHVMRKL 56
MISA C E ++ E + K D+ +L C+ M+ + H+ RK
Sbjct: 410 MISAACDHSQAENALKILVKMEEQSCKPDIKTYTPLLKLCCKRQWMKILPFLICHMFRK- 468
Query: 57 DELAISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAH 116
ISPD++T+ +L+ + C+ + + +M KG P++E ++ L K H
Sbjct: 469 ---DISPDFSTYILLVTWLCRNGKPAQSCLFLEEMVLKGFMPKQETFDLVMEKLDKGNLH 525
Query: 117 S 117
S
Sbjct: 526 S 526
>gi|296085044|emb|CBI28459.3| unnamed protein product [Vitis vinifera]
Length = 973
Score = 52.0 bits (123), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 23/98 (23%), Positives = 52/98 (53%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I F R G E+ ++ + A + ++++ N++L C+ G ME + +M+++ E
Sbjct: 317 LIDGFMRQGDIEQAFRIKDEMVACGIEANLIIWNTLLNGVCKAGKMEKALEIMQEMMEKG 376
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQP 98
+ PD T+ +LI+ C+ + A+ + +M ++ P
Sbjct: 377 VEPDSQTYSLLIEGHCRGQNMARAFELLDEMKKRKLAP 414
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/99 (22%), Positives = 50/99 (50%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+IS C+ G ++ QL + K D+V N ++ C+ G++E ++ ++
Sbjct: 632 LISGSCKQGNVDKASQLLEEMCIKGINPDIVTYNILIDGLCKAGEIERAKNLFDDIEGRG 691
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPE 99
++P+ T+ ++ +CK K A++ + +M +G P+
Sbjct: 692 LTPNCVTYAAMVDGYCKSKNPTAAFQLLEEMLLRGVPPD 730
Score = 45.1 bits (105), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 21/95 (22%), Positives = 46/95 (48%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C++G E K L D E + + V +M+ YC++ + + ++ ++
Sbjct: 667 LIDGLCKAGEIERAKNLFDDIEGRGLTPNCVTYAAMVDGYCKSKNPTAAFQLLEEMLLRG 726
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKG 95
+ PD +++++ + CKE+ + A +M KG
Sbjct: 727 VPPDAFIYNVILNFCCKEEKFEKALDLFQEMLEKG 761
Score = 42.7 bits (99), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 30/110 (27%), Positives = 55/110 (50%), Gaps = 6/110 (5%)
Query: 1 MISAFCRSGCFEETKQLAGD-FEAKYDK--YDVVLLNSMLCAYCRTGDMESVMHVMRKLD 57
+I FC C EE + A D F+ +K V N+++ YC++G ++ H++ ++
Sbjct: 736 VILNFC---CKEEKFEKALDLFQEMLEKGFASTVSFNTLIEGYCKSGKLQEANHLLEEMI 792
Query: 58 ELAISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLI 107
E P++ T+ LI + CK M A R ++M + P + +SL+
Sbjct: 793 EKQFIPNHVTYTSLIDHNCKAGMMGEAKRLWLEMQERNVMPTAKTYTSLL 842
Score = 39.7 bits (91), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 23/98 (23%), Positives = 47/98 (47%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ CR G + T + + K + V+ +++ A+ + G +E ++ ++ E
Sbjct: 422 IINGLCRCGNLQGTNAILREMVMNGLKPNAVVYTTLMTAHAKEGRVEESRMILERMREQG 481
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQP 98
I PD ++ LI FCK K A +++M + +P
Sbjct: 482 ILPDVFCYNSLIIGFCKAKRMEEARTYLMEMLERRLRP 519
Score = 38.9 bits (89), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 22/98 (22%), Positives = 43/98 (43%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I R+G E + + + K + NS++ C+ G+++ ++ ++
Sbjct: 597 LIHGLSRNGKMHEAFGIFSELQEKGLLPNAFTYNSLISGSCKQGNVDKASQLLEEMCIKG 656
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQP 98
I+PD T++ILI CK A D+ +G P
Sbjct: 657 INPDIVTYNILIDGLCKAGEIERAKNLFDDIEGRGLTP 694
Score = 37.4 bits (85), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 44/96 (45%), Gaps = 17/96 (17%)
Query: 29 DVVLLNSMLCAYCRTGDMESVMHVM-------RKLDEL----------AISPDYNTFHIL 71
DV +M+ A+C+ G+++ V+ R LDE + PD T+ IL
Sbjct: 223 DVYTYTNMISAHCKVGNVKDAKRVLLEMGEKARLLDEAIELKRSMVDKGLVPDLYTYDIL 282
Query: 72 IKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLI 107
I FC EK A +++M G +PE ++LI
Sbjct: 283 INGFCMEKRSREAKLMLLEMIDVGLKPEPITYNALI 318
Score = 35.8 bits (81), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 23/95 (24%), Positives = 44/95 (46%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C++G E K+L + + + S+L Y G+M V + ++
Sbjct: 806 LIDHNCKAGMMGEAKRLWLEMQERNVMPTAKTYTSLLHGYHNIGNMSEVSALFEEMVAKG 865
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKG 95
I PD T++++I +C+E M A + ++ KG
Sbjct: 866 IEPDKMTYYVMIDAYCREGNVMEACKLKDEILVKG 900
>gi|147833323|emb|CAN61988.1| hypothetical protein VITISV_026694 [Vitis vinifera]
Length = 553
Score = 52.0 bits (123), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 35/124 (28%), Positives = 58/124 (46%), Gaps = 3/124 (2%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+IS +C+SG + Q+ D VV N++L C +G ++ M V+ + +
Sbjct: 133 LISGYCKSGEIDNALQVLDRMNVAPD---VVTYNTILRTLCDSGKLKQAMEVLDRQLQKE 189
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
PD T+ ILI+ CKE A + + +M KG +P+ + LI + K EA+
Sbjct: 190 CYPDVITYTILIEATCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGICKEGRLDEAI 249
Query: 121 SVYN 124
N
Sbjct: 250 KFLN 253
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 24/98 (24%), Positives = 45/98 (45%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I A C+ + +L + K K DVV N ++ C+ G ++ + + +
Sbjct: 200 LIEATCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGICKEGRLDEAIKFLNNMPSYG 259
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQP 98
P+ T +I+++ C +M A + + DM RKG P
Sbjct: 260 CQPNVITHNIILRSMCSTGRWMDAEKLLSDMLRKGCSP 297
Score = 44.7 bits (104), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 47/95 (49%)
Query: 29 DVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYMLAYRTM 88
D+V N++L A C+ G ++ + ++ +L SP T++ +I K A + +
Sbjct: 368 DIVTYNTLLTALCKDGKVDVAVEILNQLSSKGCSPVLITYNTVIDGLSKVGKTERAIKLL 427
Query: 89 VDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVY 123
+M RKG +P+ SSL+ L + EA+ +
Sbjct: 428 DEMRRKGLKPDIITYSSLVSGLSREGKVDEAIKFF 462
Score = 39.7 bits (91), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 19/71 (26%), Positives = 35/71 (49%)
Query: 7 RSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYN 66
R+G E+ + + D D++ S++ +CR G + VM L++ PD
Sbjct: 69 RNGELEDGFKFLESMVYRGDIPDIIPCTSLIRGFCRIGKTKKATWVMEILEQSGAVPDVI 128
Query: 67 TFHILIKYFCK 77
T+++LI +CK
Sbjct: 129 TYNVLISGYCK 139
Score = 39.3 bits (90), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 29/126 (23%), Positives = 58/126 (46%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ + C +G + + ++L D K VV N ++ CR G + + ++ K+
Sbjct: 270 ILRSMCSTGRWMDAEKLLSDMLRKGCSPSVVTFNILINFLCRQGLLGRAIDILEKMPMHG 329
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+P+ +++ L+ FCKEK A + M +G P+ ++L+ L K A+
Sbjct: 330 CTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAV 389
Query: 121 SVYNML 126
+ N L
Sbjct: 390 EILNQL 395
Score = 38.9 bits (89), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 22/99 (22%), Positives = 43/99 (43%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ C+ G +E + + + + +V+ N +L + C TG ++ +
Sbjct: 235 LINGICKEGRLDEAIKFLNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLSDMLRKG 294
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPE 99
SP TF+ILI + C++ + A + M G P
Sbjct: 295 CSPSVVTFNILINFLCRQGLLGRAIDILEKMPMHGCTPN 333
Score = 37.0 bits (84), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 29/126 (23%), Positives = 53/126 (42%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I + G E +L + K K D++ +S++ R G ++ + L+ L
Sbjct: 410 VIDGLSKVGKTERAIKLLDEMRRKGLKPDIITYSSLVSGLSREGKVDEAIKFFHDLEGLG 469
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
I P+ T++ ++ CK + A + M K +P E + LI + EAL
Sbjct: 470 IRPNAITYNSIMLGLCKSRQTDRAIDFLAYMISKRCKPTEATYTILIEGIAYEGLAKEAL 529
Query: 121 SVYNML 126
+ N L
Sbjct: 530 DLLNEL 535
>gi|356532718|ref|XP_003534918.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62670,
mitochondrial-like [Glycine max]
Length = 529
Score = 52.0 bits (123), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 31/124 (25%), Positives = 62/124 (50%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+A C+ G +E K L + K VV ++++ YC G++++ + + ++
Sbjct: 226 LINALCKEGNVKEAKNLLAVMTKEGIKPGVVTYSTLMDGYCLVGEVQNAKQIFHAMVQMG 285
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
++P+ +++I+I CK K A + +M K P+ +SLI L K + AL
Sbjct: 286 VNPNVYSYNIMINGLCKCKRVDEAMNLLREMLHKNMVPDTVTYNSLIDGLCKSGRITSAL 345
Query: 121 SVYN 124
++ N
Sbjct: 346 NLMN 349
Score = 39.7 bits (91), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 29/121 (23%), Positives = 53/121 (43%), Gaps = 3/121 (2%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
MI+ C+ +E L + K D V NS++ C++G + S +++M ++
Sbjct: 296 MINGLCKCKRVDEAMNLLREMLHKNMVPDTVTYNSLIDGLCKSGRITSALNLMNEMHHRG 355
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHL---GKMRAHS 117
D T+ L+ CK + A + M +G QP ++LI L G+++
Sbjct: 356 QPADVVTYTSLLDALCKNQNLDKATALFMKMKERGIQPTMYTYTALIDGLCKGGRLKNAQ 415
Query: 118 E 118
E
Sbjct: 416 E 416
Score = 38.9 bits (89), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 27/123 (21%), Positives = 55/123 (44%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ +C G + KQ+ +V N M+ C+ ++ M+++R++
Sbjct: 261 LMDGYCLVGEVQNAKQIFHAMVQMGVNPNVYSYNIMINGLCKCKRVDEAMNLLREMLHKN 320
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ PD T++ LI CK A M +MH +G + +SL+ L K + +A
Sbjct: 321 MVPDTVTYNSLIDGLCKSGRITSALNLMNEMHHRGQPADVVTYTSLLDALCKNQNLDKAT 380
Query: 121 SVY 123
+++
Sbjct: 381 ALF 383
Score = 37.4 bits (85), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 21/108 (19%), Positives = 51/108 (47%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ C G +++ A+ + D V ++L C+ G+ + ++R +++ +
Sbjct: 86 LMKGLCLKGEVKKSLHFHDKVVAQGFQMDHVSYGTLLNGLCKIGETRCAVKLLRMIEDRS 145
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIF 108
P+ ++ +I CK+K+ AY +M +G P+ ++LI+
Sbjct: 146 TRPNVVMYNTIIDGLCKDKLVNEAYDLYSEMDARGIFPDAITYTTLIY 193
Score = 36.2 bits (82), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 20/98 (20%), Positives = 42/98 (42%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C+ E L + +A+ D + +++ +C G + ++ ++
Sbjct: 156 IIDGLCKDKLVNEAYDLYSEMDARGIFPDAITYTTLIYGFCLLGQLMGAFSLLDEMILKN 215
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQP 98
I+P ++ILI CKE A + M ++G +P
Sbjct: 216 INPGVYIYNILINALCKEGNVKEAKNLLAVMTKEGIKP 253
>gi|225434273|ref|XP_002276453.1| PREDICTED: pentatricopeptide repeat-containing protein At5g65560
[Vitis vinifera]
gi|296084392|emb|CBI24780.3| unnamed protein product [Vitis vinifera]
Length = 890
Score = 52.0 bits (123), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 34/123 (27%), Positives = 58/123 (47%)
Query: 2 ISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAI 61
I C+ G EE L +AK K + V+ +++ YC+ G ++ ++ ++ A
Sbjct: 481 IDTLCKEGRVEEAGTLFDSVKAKGVKANEVIYTALIDGYCKVGKIDVAYSLLERMLNDAC 540
Query: 62 SPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEALS 121
P+ T+++LI+ CKEK A + M G +P + LI + K A AL
Sbjct: 541 LPNSYTYNVLIEGLCKEKKMKEASSLVAKMLTMGVKPTVVTYTILIGEMLKDGAFDHALK 600
Query: 122 VYN 124
V+N
Sbjct: 601 VFN 603
Score = 44.3 bits (103), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 29/127 (22%), Positives = 58/127 (45%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I +C+ G ++ ++ E+ + N ++C C+ + M ++ K+ E
Sbjct: 375 LIDGYCKEGMIDDAFEILDLMESNSCGPNTRTYNELICGLCKKRKVHKAMALLNKMLERK 434
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+SP T++ LI CK AYR + M+ G P++ S I L K EA
Sbjct: 435 LSPSLITYNSLIHGQCKVNDLESAYRLLSLMNENGLVPDQWTYSVFIDTLCKEGRVEEAG 494
Query: 121 SVYNMLR 127
++++ ++
Sbjct: 495 TLFDSVK 501
Score = 40.0 bits (92), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 46/95 (48%)
Query: 29 DVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYMLAYRTM 88
++ N+M+ YC+ G++ K+ + + PD T+ LI C+ K AY
Sbjct: 193 NIYTFNAMVNGYCKIGNVVEAELYASKIVQAGLHPDTFTYTSLILGHCRNKGVDNAYEVF 252
Query: 89 VDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVY 123
+ M +KG Q E ++LI L + +EAL ++
Sbjct: 253 LIMPQKGCQRNEVSYTNLIHGLCEAGRINEALKLF 287
Score = 38.5 bits (88), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 20/78 (25%), Positives = 38/78 (48%)
Query: 30 VVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYMLAYRTMV 89
++ NS++ C+ D+ES ++ ++E + PD T+ + I CKE A
Sbjct: 439 LITYNSLIHGQCKVNDLESAYRLLSLMNENGLVPDQWTYSVFIDTLCKEGRVEEAGTLFD 498
Query: 90 DMHRKGHQPEEELCSSLI 107
+ KG + E + ++LI
Sbjct: 499 SVKAKGVKANEVIYTALI 516
Score = 37.4 bits (85), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 32/143 (22%), Positives = 60/143 (41%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I A SG E L + + K + +V ++ C+ M+ ++ ++ E
Sbjct: 305 LIYALSGSGRKVEALNLFNEMKEKGCEPNVHTYTVLIDGLCKENKMDEARKMLSEMSEKG 364
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ P T++ LI +CKE M A+ + M P + LI L K R +A+
Sbjct: 365 LIPSVVTYNALIDGYCKEGMIDDAFEILDLMESNSCGPNTRTYNELICGLCKKRKVHKAM 424
Query: 121 SVYNMLRYSKRSMCKALHEKILH 143
++ N + K S + ++H
Sbjct: 425 ALLNKMLERKLSPSLITYNSLIH 447
Score = 36.6 bits (83), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 34/134 (25%), Positives = 58/134 (43%), Gaps = 6/134 (4%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I + G F+ ++ + + DV + L AY G +E V V+ K++E
Sbjct: 585 LIGEMLKDGAFDHALKVFNHMVSLGYQPDVCTYTAFLHAYFSQGMLEEVDDVIAKMNEEG 644
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLG------KMR 114
I PD T+ +LI + + + A+ + M G +P + S LI +L + R
Sbjct: 645 ILPDLVTYTVLIDGYARLGLTHRAFDFLKCMVDTGCKPSLYIVSILIKNLSHENRMKETR 704
Query: 115 AHSEALSVYNMLRY 128
+ SV N L Y
Sbjct: 705 SEIGIDSVSNTLEY 718
>gi|147857775|emb|CAN80799.1| hypothetical protein VITISV_019809 [Vitis vinifera]
Length = 1099
Score = 52.0 bits (123), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 34/123 (27%), Positives = 58/123 (47%)
Query: 2 ISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAI 61
I C+ G EE L +AK K + V+ +++ YC+ G ++ ++ ++ A
Sbjct: 481 IDTLCKEGRVEEAGTLFDSVKAKGVKANEVIYTALIDGYCKVGKIDVAYSLLERMLNDAC 540
Query: 62 SPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEALS 121
P+ T+++LI+ CKEK A + M G +P + LI + K A AL
Sbjct: 541 LPNSYTYNVLIEGLCKEKKMKEASSLVAKMLTMGVKPTVVTYTILIGEMLKDGAFDHALK 600
Query: 122 VYN 124
V+N
Sbjct: 601 VFN 603
Score = 44.3 bits (103), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 29/127 (22%), Positives = 58/127 (45%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I +C+ G ++ ++ E+ + N ++C C+ + M ++ K+ E
Sbjct: 375 LIDGYCKEGMIDDAFEILDLMESNSCGPNTRTYNELICGLCKKRKVHKAMALLNKMLERK 434
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+SP T++ LI CK AYR + M+ G P++ S I L K EA
Sbjct: 435 LSPSLITYNSLIHGQCKVNDLESAYRLLSLMNENGLVPDQWTYSVFIDTLCKEGRVEEAG 494
Query: 121 SVYNMLR 127
++++ ++
Sbjct: 495 TLFDSVK 501
Score = 39.7 bits (91), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 46/95 (48%)
Query: 29 DVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYMLAYRTM 88
++ N+M+ YC+ G++ K+ + + PD T+ LI C+ K AY
Sbjct: 193 NIYTFNAMVNGYCKIGNVVEAELYASKIVQAGLHPDTFTYTSLILGHCRNKGVDNAYEVF 252
Query: 89 VDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVY 123
+ M +KG Q E ++LI L + +EAL ++
Sbjct: 253 LIMPQKGCQRNEVSYTNLIHGLCEAGRINEALKLF 287
Score = 38.9 bits (89), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 20/74 (27%), Positives = 36/74 (48%)
Query: 34 NSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHR 93
NS++ C+ D+ES ++ ++E + PD T+ + I CKE A +
Sbjct: 443 NSLIHGQCKVNDLESAYRLLSLMNENGLVPDQWTYSVFIDTLCKEGRVEEAGTLFDSVKA 502
Query: 94 KGHQPEEELCSSLI 107
KG + E + ++LI
Sbjct: 503 KGVKANEVIYTALI 516
Score = 37.0 bits (84), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 32/143 (22%), Positives = 60/143 (41%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I A SG E L + + K + +V ++ C+ M+ ++ ++ E
Sbjct: 305 LIYALSGSGRKVEALNLFNEMKEKGCEPNVHTYTVLIDGLCKENKMDEARKMLSEMSEKG 364
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ P T++ LI +CKE M A+ + M P + LI L K R +A+
Sbjct: 365 LIPSVVTYNALIDGYCKEGMIDDAFEILDLMESNSCGPNTRTYNELICGLCKKRKVHKAM 424
Query: 121 SVYNMLRYSKRSMCKALHEKILH 143
++ N + K S + ++H
Sbjct: 425 ALLNKMLERKLSPSLITYNSLIH 447
Score = 35.0 bits (79), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 28/110 (25%), Positives = 50/110 (45%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I + G F+ ++ + + DV + L AY G +E V V+ K++E
Sbjct: 585 LIGEMLKDGAFDHALKVFNHMVSLGYQPDVCTYTAFLHAYFSQGMLEEVDDVIAKMNEEG 644
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHL 110
I PD T+ +LI + + + A+ + M G +P + S LI +L
Sbjct: 645 ILPDLVTYTVLIDGYARLGLTHRAFDFLKCMVDTGCKPSLYIVSILIKNL 694
>gi|334184106|ref|NP_178323.3| tetratricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|218546751|sp|P0C894.1|PP143_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At2g02150
gi|330250459|gb|AEC05553.1| tetratricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 761
Score = 52.0 bits (123), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 33/124 (26%), Positives = 59/124 (47%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
MI F + G ++T + + + DV+ N+++ +C+ G + + R++
Sbjct: 303 MIDGFGKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNG 362
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ P+ ++ L+ FCKE M A + VDM R G P E +SLI K+ S+A
Sbjct: 363 LKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAF 422
Query: 121 SVYN 124
+ N
Sbjct: 423 RLGN 426
Score = 42.0 bits (97), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 29/127 (22%), Positives = 54/127 (42%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
MI C+ G E + L + + + D V NSM+ + + G ++ + ++ ++
Sbjct: 268 MIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGRLDDTVCFFEEMKDMC 327
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
PD T++ LI FCK + +M G +P S+L+ K +A+
Sbjct: 328 CEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAI 387
Query: 121 SVYNMLR 127
Y +R
Sbjct: 388 KFYVDMR 394
>gi|449433429|ref|XP_004134500.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At3g16890, mitochondrial-like
[Cucumis sativus]
Length = 688
Score = 52.0 bits (123), Expect = 8e-05, Method: Composition-based stats.
Identities = 26/95 (27%), Positives = 49/95 (51%)
Query: 29 DVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYMLAYRTM 88
+V+ N ++C++C GD+ H++R++ I PD +F+ LI+ + + + A +
Sbjct: 569 NVITYNILICSFCAIGDVSRSTHLLRQMKLHGIQPDTFSFNALIQGYTGKNRFQKAEKLF 628
Query: 89 VDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVY 123
M R G QP+ +LI L K H +A ++
Sbjct: 629 DSMLRLGIQPDNYTYGALIKSLCKSGRHDKAREIF 663
Score = 43.1 bits (100), Expect = 0.036, Method: Composition-based stats.
Identities = 39/162 (24%), Positives = 69/162 (42%), Gaps = 13/162 (8%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I FCR+G ++ ++L + D+ NS++ C+ E+ ++ E
Sbjct: 506 LIGGFCRNGNMDKAQELLEMLLESRFRPDIFTFNSLIDGLCQAHKHENAFGCFTEMVEWD 565
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLI-FHLGKMRAHSEA 119
+ P+ T++ILI FC + + M G QP+ ++LI + GK R
Sbjct: 566 VPPNVITYNILICSFCAIGDVSRSTHLLRQMKLHGIQPDTFSFNALIQGYTGKNRFQKAE 625
Query: 120 LSVYNMLRYS-----------KRSMCKA-LHEKILHILISGK 149
+MLR +S+CK+ H+K I +S K
Sbjct: 626 KLFDSMLRLGIQPDNYTYGALIKSLCKSGRHDKAREIFLSMK 667
Score = 42.4 bits (98), Expect = 0.060, Method: Composition-based stats.
Identities = 20/91 (21%), Positives = 41/91 (45%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C+ + ++ D + ++V N+++ +CR G+M+ ++ L E
Sbjct: 471 VIDCLCKGKSMDRASEMFRDLHNRGISPNIVTYNTLIGGFCRNGNMDKAQELLEMLLESR 530
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDM 91
PD TF+ LI C+ + A+ +M
Sbjct: 531 FRPDIFTFNSLIDGLCQAHKHENAFGCFTEM 561
Score = 38.5 bits (88), Expect = 0.98, Method: Composition-based stats.
Identities = 24/104 (23%), Positives = 39/104 (37%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I +FC G + L + + D N+++ Y + + + L
Sbjct: 576 LICSFCAIGDVSRSTHLLRQMKLHGIQPDTFSFNALIQGYTGKNRFQKAEKLFDSMLRLG 635
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCS 104
I PD T+ LIK CK + A + M G P+ CS
Sbjct: 636 IQPDNYTYGALIKSLCKSGRHDKAREIFLSMKENGCTPDSYTCS 679
Score = 38.1 bits (87), Expect = 1.2, Method: Composition-based stats.
Identities = 26/126 (20%), Positives = 56/126 (44%)
Query: 29 DVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYMLAYRTM 88
D N ++ CR G ++ + +M++++ L P+ T+ ILI F K ++ +
Sbjct: 263 DRFTYNILIHGVCRLGVVDEALRLMKQMEGLGYFPNVFTYTILIDGFFNAKRAGETFKVL 322
Query: 89 VDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVYNMLRYSKRSMCKALHEKILHILISG 148
M + P E SL+ + + A +A + K+ + + + + IL+ L +
Sbjct: 323 QTMKERNVVPNEATMRSLVHGVFRCIAPDKAFELLLEFVERKQGITQLVCDNILYCLSNN 382
Query: 149 KLLKDA 154
+ +A
Sbjct: 383 SMASEA 388
>gi|224129154|ref|XP_002320514.1| predicted protein [Populus trichocarpa]
gi|222861287|gb|EEE98829.1| predicted protein [Populus trichocarpa]
Length = 478
Score = 52.0 bits (123), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 40/158 (25%), Positives = 73/158 (46%), Gaps = 1/158 (0%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++SA C+SG E+ ++ + E+ +VV N+++ +C G + + + +
Sbjct: 205 VLSALCKSGKLEKAVEVLREMESVGITPNVVSYNTLIAGHCNKGLLSIATKLKNLMGKNG 264
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ P+ TF+ LI FCKE A R +M P ++LI G++ + A
Sbjct: 265 LEPNVVTFNSLIHGFCKEGKLHEANRFFSEMKVMNVTPNTVTYNTLINGYGQVGNSNMAG 324
Query: 121 SVY-NMLRYSKRSMCKALHEKILHILISGKLLKDAYIV 157
VY M+R ++ + IL + GK K A++V
Sbjct: 325 KVYEEMMRNGVKADILTYNALILGLCKEGKTKKAAFLV 362
Score = 43.9 bits (102), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 20/75 (26%), Positives = 42/75 (56%)
Query: 33 LNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYMLAYRTMVDMH 92
N +L A C++G +E + V+R+++ + I+P+ +++ LI C + + +A + M
Sbjct: 202 FNLVLSALCKSGKLEKAVEVLREMESVGITPNVVSYNTLIAGHCNKGLLSIATKLKNLMG 261
Query: 93 RKGHQPEEELCSSLI 107
+ G +P +SLI
Sbjct: 262 KNGLEPNVVTFNSLI 276
Score = 39.3 bits (90), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 19/75 (25%), Positives = 38/75 (50%)
Query: 27 KYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYMLAYR 86
K D++ N+++ C+ G + ++++LD+ + P+ +T+ LI C K A++
Sbjct: 336 KADILTYNALILGLCKEGKTKKAAFLVKELDKENLVPNASTYSALISGQCARKNSDRAFQ 395
Query: 87 TMVDMHRKGHQPEEE 101
M R G P E+
Sbjct: 396 LYKSMVRSGCHPNEQ 410
>gi|356551783|ref|XP_003544253.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like [Glycine max]
Length = 576
Score = 52.0 bits (123), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 31/126 (24%), Positives = 59/126 (46%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I A C+ + +L + K K DVV N ++ +C+ G ++ + ++KL
Sbjct: 222 LIDATCKESGVGQAMKLFNEMRNKGCKPDVVTYNVLIKGFCKGGRLDEAIRFLKKLPSYG 281
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
PD + +++++ C +M A + + M RKG P + LI L + +AL
Sbjct: 282 CQPDVISHNMILRSLCSGGRWMDAMKLLATMLRKGCLPSVVTFNILINFLCQKGLLGKAL 341
Query: 121 SVYNML 126
+V M+
Sbjct: 342 NVLEMM 347
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/127 (23%), Positives = 57/127 (44%), Gaps = 3/127 (2%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I FC+ G + Q+ G E DV N ++ YC++G++E + V LD +
Sbjct: 120 LIREFCKIGRTKNASQIMGILEESGAVIDVTSYNVLISGYCKSGEIEEALRV---LDRMG 176
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+SP+ T+ ++ C A + + + P+ C+ LI K +A+
Sbjct: 177 VSPNAATYDAVLCSLCDRGKLKQAMQVLGRQLQSKCYPDVVTCTVLIDATCKESGVGQAM 236
Query: 121 SVYNMLR 127
++N +R
Sbjct: 237 KLFNEMR 243
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 62/156 (39%), Gaps = 7/156 (4%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYD--KYDVVLLNSMLCAYCRTGDMESVMHVMRKLDE 58
+IS +C+SG EE ++ + YD VL C+ C G ++ M V+ + +
Sbjct: 155 LISGYCKSGEIEEALRVLDRMGVSPNAATYDAVL-----CSLCDRGKLKQAMQVLGRQLQ 209
Query: 59 LAISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSE 118
PD T +LI CKE A + +M KG +P+ + LI K E
Sbjct: 210 SKCYPDVVTCTVLIDATCKESGVGQAMKLFNEMRNKGCKPDVVTYNVLIKGFCKGGRLDE 269
Query: 119 ALSVYNMLRYSKRSMCKALHEKILHILISGKLLKDA 154
A+ L H IL L SG DA
Sbjct: 270 AIRFLKKLPSYGCQPDVISHNMILRSLCSGGRWMDA 305
Score = 44.3 bits (103), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 26/107 (24%), Positives = 46/107 (42%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I FC+ G +E + + + DV+ N +L + C G M ++ +
Sbjct: 257 LIKGFCKGGRLDEAIRFLKKLPSYGCQPDVISHNMILRSLCSGGRWMDAMKLLATMLRKG 316
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLI 107
P TF+ILI + C++ + A + M + GH P + LI
Sbjct: 317 CLPSVVTFNILINFLCQKGLLGKALNVLEMMPKHGHTPNSRSFNPLI 363
Score = 43.1 bits (100), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 31/115 (26%), Positives = 53/115 (46%), Gaps = 1/115 (0%)
Query: 27 KYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYMLAYR 86
K D++ S++ R G + M L AI P+ ++ +I CK + LA
Sbjct: 458 KPDLITCTSVVGGLSREGKVREAMKFFHYLKRFAIRPNAFIYNSIITGLCKSQQTSLAID 517
Query: 87 TMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVYNMLRYSKRSMCKALHEKI 141
+ DM KG +P E ++LI + +A + N L YS+ + ++L EK+
Sbjct: 518 FLADMVAKGCKPTEATYTTLIKGITYEGLAEDASKLSNEL-YSRGLVKRSLVEKV 571
Score = 42.4 bits (98), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 24/99 (24%), Positives = 49/99 (49%)
Query: 29 DVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYMLAYRTM 88
D+V N +L A C+ G ++ + ++ +L SP +++ +I K LA +
Sbjct: 390 DIVTYNILLTALCKDGKVDDAVVILSQLSSKGCSPSLISYNTVIDGLLKVGKAELAVELL 449
Query: 89 VDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVYNMLR 127
+M KG +P+ C+S++ L + EA+ ++ L+
Sbjct: 450 EEMCYKGLKPDLITCTSVVGGLSREGKVREAMKFFHYLK 488
>gi|225459022|ref|XP_002285611.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like isoform 1 [Vitis vinifera]
Length = 610
Score = 52.0 bits (123), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 35/124 (28%), Positives = 58/124 (46%), Gaps = 3/124 (2%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+IS +C+SG + Q+ D VV N++L C +G ++ M V+ + +
Sbjct: 190 LISGYCKSGEIDNALQVLDRMNVAPD---VVTYNTILRTLCDSGKLKQAMEVLDRQLQKE 246
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
PD T+ ILI+ CKE A + + +M KG +P+ + LI + K EA+
Sbjct: 247 CYPDVITYTILIEATCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGICKEGRLDEAI 306
Query: 121 SVYN 124
N
Sbjct: 307 KFLN 310
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 24/98 (24%), Positives = 45/98 (45%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I A C+ + +L + K K DVV N ++ C+ G ++ + + +
Sbjct: 257 LIEATCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGICKEGRLDEAIKFLNNMPSYG 316
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQP 98
P+ T +I+++ C +M A + + DM RKG P
Sbjct: 317 CQPNVITHNIILRSMCSTGRWMDAEKLLSDMLRKGCSP 354
Score = 44.7 bits (104), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 47/95 (49%)
Query: 29 DVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYMLAYRTM 88
D+V N++L A C+ G ++ + ++ +L SP T++ +I K A + +
Sbjct: 425 DIVTYNTLLTALCKDGKVDVAVEILNQLSSKGCSPVLITYNTVIDGLSKVGKTERAIKLL 484
Query: 89 VDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVY 123
+M RKG +P+ SSL+ L + EA+ +
Sbjct: 485 DEMRRKGLKPDIITYSSLVSGLSREGKVDEAIKFF 519
Score = 39.7 bits (91), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 19/71 (26%), Positives = 35/71 (49%)
Query: 7 RSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYN 66
R+G E+ + + D D++ S++ +CR G + VM L++ PD
Sbjct: 126 RNGELEDGFKFLESMVYRGDIPDIIPCTSLIRGFCRIGKTKKATWVMEILEQSGAVPDVI 185
Query: 67 TFHILIKYFCK 77
T+++LI +CK
Sbjct: 186 TYNVLISGYCK 196
Score = 38.9 bits (89), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 29/126 (23%), Positives = 58/126 (46%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ + C +G + + ++L D K VV N ++ CR G + + ++ K+
Sbjct: 327 ILRSMCSTGRWMDAEKLLSDMLRKGCSPSVVTFNILINFLCRQGLLGRAIDILEKMPMHG 386
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+P+ +++ L+ FCKEK A + M +G P+ ++L+ L K A+
Sbjct: 387 CTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAV 446
Query: 121 SVYNML 126
+ N L
Sbjct: 447 EILNQL 452
Score = 38.9 bits (89), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 22/99 (22%), Positives = 43/99 (43%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ C+ G +E + + + + +V+ N +L + C TG ++ +
Sbjct: 292 LINGICKEGRLDEAIKFLNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLSDMLRKG 351
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPE 99
SP TF+ILI + C++ + A + M G P
Sbjct: 352 CSPSVVTFNILINFLCRQGLLGRAIDILEKMPMHGCTPN 390
Score = 37.0 bits (84), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 29/126 (23%), Positives = 53/126 (42%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I + G E +L + K K D++ +S++ R G ++ + L+ L
Sbjct: 467 VIDGLSKVGKTERAIKLLDEMRRKGLKPDIITYSSLVSGLSREGKVDEAIKFFHDLEGLG 526
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
I P+ T++ ++ CK + A + M K +P E + LI + EAL
Sbjct: 527 IRPNAITYNSIMLGLCKSRQTDRAIDFLAYMISKRCKPTEATYTILIEGIAYEGLAKEAL 586
Query: 121 SVYNML 126
+ N L
Sbjct: 587 DLLNEL 592
>gi|449454139|ref|XP_004144813.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09820-like [Cucumis sativus]
gi|449524964|ref|XP_004169491.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09820-like [Cucumis sativus]
Length = 611
Score = 52.0 bits (123), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 29/113 (25%), Positives = 56/113 (49%), Gaps = 3/113 (2%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYC---RTGDMESVMHVMRKLD 57
+I+ C+ G + + D + +VV N+++ YC R G M +++++
Sbjct: 236 VINGLCKVGKLNKAGDVVDDMKVWGFWPNVVTYNTLIDGYCKMGRVGKMYKADAILKEMV 295
Query: 58 ELAISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHL 110
E +SP+ TF++LI FCK++ A + +M +G +P +SL+ L
Sbjct: 296 ENKVSPNSVTFNVLIDGFCKDENLSAALKVFEEMQSQGLKPTVVTYNSLVNGL 348
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/96 (25%), Positives = 46/96 (47%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I FCR G EE K L + + + K D V N ++ A+C + + ++ ++ +
Sbjct: 449 LIVGFCREGKMEEVKNLLNEMQCRGVKADTVTYNILISAWCEKKEPKKAARLIDEMLDKG 508
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGH 96
+ P + T++IL+ +C E A M ++G
Sbjct: 509 LKPSHLTYNILLNGYCMEGNLRAALNLRKQMEKEGR 544
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/78 (26%), Positives = 42/78 (53%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ +C+ EE ++L + + +V+ N++L YC+ G ME + + + E
Sbjct: 379 LINGYCKKKLLEEARELFDNIGKQGLTPNVITFNTLLHGYCKFGKMEEAFLLQKVMLEKG 438
Query: 61 ISPDYNTFHILIKYFCKE 78
P+ +T++ LI FC+E
Sbjct: 439 FLPNASTYNCLIVGFCRE 456
Score = 43.9 bits (102), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 26/98 (26%), Positives = 48/98 (48%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ +C+ G EE L K + N ++ +CR G ME V +++ ++
Sbjct: 414 LLHGYCKFGKMEEAFLLQKVMLEKGFLPNASTYNCLIVGFCREGKMEEVKNLLNEMQCRG 473
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQP 98
+ D T++ILI +C++K A R + +M KG +P
Sbjct: 474 VKADTVTYNILISAWCEKKEPKKAARLIDEMLDKGLKP 511
Score = 42.0 bits (97), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 27/116 (23%), Positives = 50/116 (43%), Gaps = 3/116 (2%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+++ C G E K L + + K +V+ N+++ YC+ +E + + +
Sbjct: 344 LVNGLCNEGKLNEAKVLLDEMLSSNLKPNVITYNALINGYCKKKLLEEARELFDNIGKQG 403
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHL---GKM 113
++P+ TF+ L+ +CK A+ M KG P + LI GKM
Sbjct: 404 LTPNVITFNTLLHGYCKFGKMEEAFLLQKVMLEKGFLPNASTYNCLIVGFCREGKM 459
Score = 38.1 bits (87), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 20/99 (20%), Positives = 46/99 (46%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I FC+ ++ + +++ K VV NS++ C G + ++ ++
Sbjct: 309 LIDGFCKDENLSAALKVFEEMQSQGLKPTVVTYNSLVNGLCNEGKLNEAKVLLDEMLSSN 368
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPE 99
+ P+ T++ LI +CK+K+ A ++ ++G P
Sbjct: 369 LKPNVITYNALINGYCKKKLLEEARELFDNIGKQGLTPN 407
>gi|449503889|ref|XP_004162218.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g16890, mitochondrial-like [Cucumis sativus]
Length = 697
Score = 52.0 bits (123), Expect = 8e-05, Method: Composition-based stats.
Identities = 26/95 (27%), Positives = 49/95 (51%)
Query: 29 DVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYMLAYRTM 88
+V+ N ++C++C GD+ H++R++ I PD +F+ LI+ + + + A +
Sbjct: 578 NVITYNILICSFCAIGDVSRSTHLLRQMKLHGIQPDTFSFNALIQGYTGKNRFQKAEKLF 637
Query: 89 VDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVY 123
M R G QP+ +LI L K H +A ++
Sbjct: 638 DSMLRLGIQPDNYTYGALIKSLCKSGRHDKAREIF 672
Score = 43.1 bits (100), Expect = 0.036, Method: Composition-based stats.
Identities = 39/162 (24%), Positives = 69/162 (42%), Gaps = 13/162 (8%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I FCR+G ++ ++L + D+ NS++ C+ E+ ++ E
Sbjct: 515 LIGGFCRNGNMDKAQELLEMLLESRFRPDIFTFNSLIDGLCQAHKHENAFGCFTEMVEWD 574
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLI-FHLGKMRAHSEA 119
+ P+ T++ILI FC + + M G QP+ ++LI + GK R
Sbjct: 575 VPPNVITYNILICSFCAIGDVSRSTHLLRQMKLHGIQPDTFSFNALIQGYTGKNRFQKAE 634
Query: 120 LSVYNMLRYS-----------KRSMCKA-LHEKILHILISGK 149
+MLR +S+CK+ H+K I +S K
Sbjct: 635 KLFDSMLRLGIQPDNYTYGALIKSLCKSGRHDKAREIFLSMK 676
Score = 42.4 bits (98), Expect = 0.061, Method: Composition-based stats.
Identities = 20/91 (21%), Positives = 41/91 (45%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C+ + ++ D + ++V N+++ +CR G+M+ ++ L E
Sbjct: 480 VIDCLCKGKSMDRASEMFRDLHNRGISPNIVTYNTLIGGFCRNGNMDKAQELLEMLLESR 539
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDM 91
PD TF+ LI C+ + A+ +M
Sbjct: 540 FRPDIFTFNSLIDGLCQAHKHENAFGCFTEM 570
Score = 39.7 bits (91), Expect = 0.41, Method: Composition-based stats.
Identities = 27/126 (21%), Positives = 57/126 (45%)
Query: 29 DVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYMLAYRTM 88
D N ++ CR G ++ + +M++++ L P+ T+ ILI F K A++ +
Sbjct: 263 DRFTYNILIHGVCRLGVVDEALRLMKQMEGLGYFPNVFTYTILIDGFFNAKRAGEAFKVL 322
Query: 89 VDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVYNMLRYSKRSMCKALHEKILHILISG 148
M + P E SL+ + + A +A + K+ + + + + IL+ L +
Sbjct: 323 QTMKERNVVPNEATMRSLVHGVFRCIAPDKAFELLLEFVERKQGITQLVCDNILYCLSNN 382
Query: 149 KLLKDA 154
+ +A
Sbjct: 383 SMASEA 388
Score = 38.5 bits (88), Expect = 1.00, Method: Composition-based stats.
Identities = 24/104 (23%), Positives = 39/104 (37%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I +FC G + L + + D N+++ Y + + + L
Sbjct: 585 LICSFCAIGDVSRSTHLLRQMKLHGIQPDTFSFNALIQGYTGKNRFQKAEKLFDSMLRLG 644
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCS 104
I PD T+ LIK CK + A + M G P+ CS
Sbjct: 645 IQPDNYTYGALIKSLCKSGRHDKAREIFLSMKENGCTPDSYTCS 688
>gi|242042646|ref|XP_002459194.1| hypothetical protein SORBIDRAFT_02g000310 [Sorghum bicolor]
gi|241922571|gb|EER95715.1| hypothetical protein SORBIDRAFT_02g000310 [Sorghum bicolor]
Length = 847
Score = 52.0 bits (123), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 49/99 (49%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ C G E +L + +AK K D+V+ NS++ CR G + + VM ++ E
Sbjct: 260 LINGLCAEGDVERALELFNEAQAKDLKPDLVVYNSLVKGLCRQGLILHALQVMNEMVEDG 319
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPE 99
PD T++I+I CK A M D KG+ P+
Sbjct: 320 CHPDIWTYNIVINGLCKMGNISDAAVVMNDAIVKGYLPD 358
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 48/99 (48%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I FC+ EE + D + N+++ +CR GD++ + +KLDE
Sbjct: 435 LIENFCKINQLEEASGVIVRMSQDGLVPDTISFNTLIHGFCRNGDLDGAYLLFQKLDEKG 494
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPE 99
S +TF+ILI + + +A + +M KG++P+
Sbjct: 495 YSATADTFNILIGAYSSKLNMQMAEKIFGEMISKGYKPD 533
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 33/123 (26%), Positives = 51/123 (41%), Gaps = 1/123 (0%)
Query: 2 ISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAI 61
I C G EE L +A Y DVV N+++ C+ ++ +R++
Sbjct: 157 IRGLCEGGRLEEAVALVESMDA-YIAPDVVTYNTLMRGLCKDSKVQEAAQYLRRMMNQGC 215
Query: 62 SPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEALS 121
PD T++ +I +CK M A + D KG P+ SLI L AL
Sbjct: 216 IPDDFTYNTIIDGYCKRDMLQEATELLKDAIFKGFVPDRVTYCSLINGLCAEGDVERALE 275
Query: 122 VYN 124
++N
Sbjct: 276 LFN 278
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/124 (25%), Positives = 56/124 (45%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I +C+ +E +L D K D V S++ C GD+E + + +
Sbjct: 225 IIDGYCKRDMLQEATELLKDAIFKGFVPDRVTYCSLINGLCAEGDVERALELFNEAQAKD 284
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ PD ++ L+K C++ + + A + M +M G P+ + +I L KM S+A
Sbjct: 285 LKPDLVVYNSLVKGLCRQGLILHALQVMNEMVEDGCHPDIWTYNIVINGLCKMGNISDAA 344
Query: 121 SVYN 124
V N
Sbjct: 345 VVMN 348
Score = 44.3 bits (103), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 31/133 (23%), Positives = 60/133 (45%), Gaps = 2/133 (1%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ C+ G + + D K DV N+M+ YC+ ++S + ++ ++
Sbjct: 330 VINGLCKMGNISDAAVVMNDAIVKGYLPDVFTFNTMIDGYCKRLKLDSALQLVERMWMYG 389
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
I+PD T++ ++ CK T +M KG +P + LI + K+ EA
Sbjct: 390 IAPDAITYNSVLNGLCKAGKAKEVNETFEEMILKGCRPNAITYNILIENFCKINQLEEAS 449
Query: 121 SVYNMLRYSKRSM 133
V ++R S+ +
Sbjct: 450 GV--IVRMSQDGL 460
Score = 38.9 bits (89), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 27/107 (25%), Positives = 45/107 (42%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
MI +C+ + QL D + NS+L C+ G + V ++
Sbjct: 365 MIDGYCKRLKLDSALQLVERMWMYGIAPDAITYNSVLNGLCKAGKAKEVNETFEEMILKG 424
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLI 107
P+ T++ILI+ FCK A +V M + G P+ ++LI
Sbjct: 425 CRPNAITYNILIENFCKINQLEEASGVIVRMSQDGLVPDTISFNTLI 471
Score = 37.7 bits (86), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 21/107 (19%), Positives = 49/107 (45%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+++ C++G +E + + K + + + N ++ +C+ +E V+ ++ +
Sbjct: 400 VLNGLCKAGKAKEVNETFEEMILKGCRPNAITYNILIENFCKINQLEEASGVIVRMSQDG 459
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLI 107
+ PD +F+ LI FC+ AY + KG+ + + LI
Sbjct: 460 LVPDTISFNTLIHGFCRNGDLDGAYLLFQKLDEKGYSATADTFNILI 506
>gi|108711050|gb|ABF98845.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|215693326|dbj|BAG88708.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222625789|gb|EEE59921.1| hypothetical protein OsJ_12549 [Oryza sativa Japonica Group]
Length = 554
Score = 52.0 bits (123), Expect = 8e-05, Method: Composition-based stats.
Identities = 31/128 (24%), Positives = 64/128 (50%), Gaps = 2/128 (1%)
Query: 33 LNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYMLAYRTMVDMH 92
N+++ +C+ ++ + M ++ + SP T+ L++ +C EK + Y ++D
Sbjct: 273 FNTLVHGWCKARMLKEALDTMEEMKQHGFSPSVVTYTSLVEAYCMEKDFQTVY-ALLDEM 331
Query: 93 RKGHQPEEELCSSLIFH-LGKMRAHSEALSVYNMLRYSKRSMCKALHEKILHILISGKLL 151
RK P + +++ H LGK EAL ++ L+ + + + +++IL L
Sbjct: 332 RKRRCPPNVVTYTILMHALGKAGRTREALDTFDKLKEDGVAPDASFYNSLIYILGRAGRL 391
Query: 152 KDAYIVVK 159
+DAY VV+
Sbjct: 392 EDAYSVVE 399
Score = 39.7 bits (91), Expect = 0.42, Method: Composition-based stats.
Identities = 28/127 (22%), Positives = 55/127 (43%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ +C++ +E + + VV S++ AYC D ++V ++ ++ +
Sbjct: 276 LVHGWCKARMLKEALDTMEEMKQHGFSPSVVTYTSLVEAYCMEKDFQTVYALLDEMRKRR 335
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
P+ T+ IL+ K A T + G P+ +SLI+ LG+ +A
Sbjct: 336 CPPNVVTYTILMHALGKAGRTREALDTFDKLKEDGVAPDASFYNSLIYILGRAGRLEDAY 395
Query: 121 SVYNMLR 127
SV +R
Sbjct: 396 SVVEEMR 402
Score = 39.7 bits (91), Expect = 0.43, Method: Composition-based stats.
Identities = 22/99 (22%), Positives = 45/99 (45%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I R+G E+ + + +V N+++ A C E+ + ++ K++E +
Sbjct: 381 LIYILGRAGRLEDAYSVVEEMRTTGIAPNVTTFNTLISAACDHSQAENALKLLVKMEEQS 440
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPE 99
+PD T+ L+K CK + + + M RK P+
Sbjct: 441 CNPDIKTYTPLLKLCCKRQWVKILLFLVCHMFRKDISPD 479
>gi|296081018|emb|CBI18522.3| unnamed protein product [Vitis vinifera]
Length = 808
Score = 52.0 bits (123), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 37/134 (27%), Positives = 65/134 (48%), Gaps = 10/134 (7%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I +C+ G EE L D +A+ K D +++++ YC GDME + + +
Sbjct: 605 LIDGYCKFGNMEEALNLLIDLKARCIKPDEFTVSALINGYCHKGDMEGALGFFFEFKKKD 664
Query: 61 ISPDYNTFHILIKYFC-KEKM--------YMLAYRTMVDM-HRKGHQPEEELCSSLIFHL 110
I PD+ F L++ C K +M ML R+++++ +R + E E S I L
Sbjct: 665 ILPDFLGFMYLVRGLCAKGRMEEARGILREMLQTRSVLELINRVDTEIETESVESFIISL 724
Query: 111 GKMRAHSEALSVYN 124
+ + EA++V N
Sbjct: 725 CEQGSIQEAVTVLN 738
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 39/76 (51%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I + C+ GC + KQL K +V + NS++ YC+ G+ME ++++ L
Sbjct: 570 LIDSLCKEGCLLDAKQLFEKMVIKGFNPNVRVYNSLIDGYCKFGNMEEALNLLIDLKARC 629
Query: 61 ISPDYNTFHILIKYFC 76
I PD T LI +C
Sbjct: 630 IKPDEFTVSALINGYC 645
Score = 44.7 bits (104), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 30/126 (23%), Positives = 57/126 (45%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ A + G E L E + +DVV +S +C Y R G + + +++ E
Sbjct: 129 LLGALFQLGRVREVSDLVSWMEREEFVFDVVFYSSWICGYFREGVLVEAIRKHKEMIEKG 188
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
I+PD ++ ILI F +E A + M + G +P ++++ K EA
Sbjct: 189 IAPDTVSYTILIDGFSREGYVEKAIGFLEKMKKDGLKPNLVTYTAIMLGFCKKGKLDEAY 248
Query: 121 SVYNML 126
+++ M+
Sbjct: 249 TLFKMV 254
Score = 43.9 bits (102), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 37/148 (25%), Positives = 61/148 (41%), Gaps = 4/148 (2%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
MI C+ G ++ L + K ++ NS++ CR G + + L+++
Sbjct: 500 MIDVLCKEGHLDKALDLCAFVKKKGIALNIYAYNSVINGLCRQGCLVQAFRLFDSLEKID 559
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ P T+ LI CKE + A + M KG P + +SLI K EAL
Sbjct: 560 LVPSEITYATLIDSLCKEGCLLDAKQLFEKMVIKGFNPNVRVYNSLIDGYCKFGNMEEAL 619
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISG 148
+ L ++ C E + LI+G
Sbjct: 620 N----LLIDLKARCIKPDEFTVSALING 643
Score = 40.0 bits (92), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 33/150 (22%), Positives = 59/150 (39%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I F R G E+ + K ++V +++ +C+ G ++ + + ++ L
Sbjct: 199 LIDGFSREGYVEKAIGFLEKMKKDGLKPNLVTYTAIMLGFCKKGKLDEAYTLFKMVENLG 258
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
I D + LI FC + + DM ++G P +S+I L K SEA
Sbjct: 259 IEVDEFMYVTLIDGFCTRGDIDCVFGLLEDMEKRGISPSIVTYNSIINGLCKAGRTSEAD 318
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKL 150
V + + LH I + G L
Sbjct: 319 EVSKGIAGDAVTFSTLLHGYIEEENVKGIL 348
>gi|115453133|ref|NP_001050167.1| Os03g0363700 [Oryza sativa Japonica Group]
gi|108708311|gb|ABF96106.1| pentatricopeptide, putative [Oryza sativa Japonica Group]
gi|113548638|dbj|BAF12081.1| Os03g0363700 [Oryza sativa Japonica Group]
Length = 564
Score = 52.0 bits (123), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 36/160 (22%), Positives = 72/160 (45%), Gaps = 2/160 (1%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+++ FC G +E + + K ++DV+ N ++ C+ G + + V +L
Sbjct: 366 LVTGFCTHGRVDEALGMFEEMVKKGIEHDVITYNILIQGLCKAGRLSEAIQVYEQLLSSG 425
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ P +TF LI C+E A + MH KG +P + S+I K R + +
Sbjct: 426 LEPSVSTFTPLIDTMCEEGQVDAAVELLKVMHAKGLEPLARINDSIINGFCKARRPEDGM 485
Query: 121 S-VYNMLRYSKRSMCKALHEKILHILISGKLLKDAYIVVK 159
+ + ML+ + + + ++ +L S + DA +V+
Sbjct: 486 AWLAGMLKKNLKPREHTFN-SLVELLSSSGRVDDALLVLN 524
Score = 39.3 bits (90), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 28/125 (22%), Positives = 58/125 (46%), Gaps = 3/125 (2%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+++ +C++G FE +++ + K K V N ++ +C G ++ + + ++ +
Sbjct: 331 LVAYYCKAGDFEMARKVYDEMLGKGLKESTVSCNILVTGFCTHGRVDEALGMFEEMVKKG 390
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHL---GKMRAHS 117
I D T++ILI+ CK A + + G +P + LI + G++ A
Sbjct: 391 IEHDVITYNILIQGLCKAGRLSEAIQVYEQLLSSGLEPSVSTFTPLIDTMCEEGQVDAAV 450
Query: 118 EALSV 122
E L V
Sbjct: 451 ELLKV 455
Score = 38.9 bits (89), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 33/128 (25%), Positives = 55/128 (42%)
Query: 2 ISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAI 61
I C+ GC +E +Q+ + K + + S++ YC+ GD E V ++ +
Sbjct: 297 IDGLCKMGCIDEARQIWNEMVDKGMEPNEYAYCSLVAYYCKAGDFEMARKVYDEMLGKGL 356
Query: 62 SPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEALS 121
+ +IL+ FC A +M +KG + + + LI L K SEA+
Sbjct: 357 KESTVSCNILVTGFCTHGRVDEALGMFEEMVKKGIEHDVITYNILIQGLCKAGRLSEAIQ 416
Query: 122 VYNMLRYS 129
VY L S
Sbjct: 417 VYEQLLSS 424
>gi|302143027|emb|CBI20322.3| unnamed protein product [Vitis vinifera]
Length = 687
Score = 52.0 bits (123), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 31/132 (23%), Positives = 67/132 (50%), Gaps = 5/132 (3%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
M+ + + G E+T+ L ++E+ + YD + N++L +C+ G +E ++R + E
Sbjct: 319 MLGSLVKLGELEDTEALLKEWESSGNCYDFRVPNTLLIGFCQKGLIEKAESMLRDIVEEG 378
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTM-----VDMHRKGHQPEEELCSSLIFHLGKMRA 115
+P N++ I+ + +++ A+ M V KG +P+ ++ SS++ LG R
Sbjct: 379 KTPTPNSWSIVAAGYIEKQNMEKAFECMKEAIAVLAENKGWRPKPKVISSILSWLGDNRD 438
Query: 116 HSEALSVYNMLR 127
E + + L+
Sbjct: 439 VEEVETFVSALK 450
>gi|15239874|ref|NP_196771.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75171712|sp|Q9FMQ1.1|PP376_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g12100, mitochondrial; Flags: Precursor
gi|9759377|dbj|BAB10028.1| unnamed protein product [Arabidopsis thaliana]
gi|28973713|gb|AAO64173.1| unknown protein [Arabidopsis thaliana]
gi|29824237|gb|AAP04079.1| unknown protein [Arabidopsis thaliana]
gi|110737169|dbj|BAF00534.1| hypothetical protein [Arabidopsis thaliana]
gi|332004380|gb|AED91763.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 816
Score = 52.0 bits (123), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 30/112 (26%), Positives = 57/112 (50%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+++A C+ G E+ +++ G AK + V+ N+M+ YCR GD+ + +++
Sbjct: 360 LLNALCKEGKIEKAEEILGREMAKGLVPNEVIYNTMIDGYCRKGDLVGARMKIEAMEKQG 419
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGK 112
+ PD+ ++ LI+ FC+ A + + M KG P E + LI G+
Sbjct: 420 MKPDHLAYNCLIRRFCELGEMENAEKEVNKMKLKGVSPSVETYNILIGGYGR 471
Score = 40.4 bits (93), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 29/123 (23%), Positives = 49/123 (39%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C+ + +QL + A+ ++ N+++ YC+ G+ E V ++
Sbjct: 220 LIDGLCKGKRMNDAEQLFDEMLARRLLPSLITYNTLIDGYCKAGNPEKSFKVRERMKADH 279
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
I P TF+ L+K K M A + +M G P+ S L AL
Sbjct: 280 IEPSLITFNTLLKGLFKAGMVEDAENVLKEMKDLGFVPDAFTFSILFDGYSSNEKAEAAL 339
Query: 121 SVY 123
VY
Sbjct: 340 GVY 342
Score = 35.4 bits (80), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 20/80 (25%), Positives = 36/80 (45%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I +G E + L + K K DV NS++ Y G+++ + + ++
Sbjct: 570 LIDGLSMTGKLSEAEDLLLEISRKGLKPDVFTYNSLISGYGFAGNVQRCIALYEEMKRSG 629
Query: 61 ISPDYNTFHILIKYFCKEKM 80
I P T+H+LI KE +
Sbjct: 630 IKPTLKTYHLLISLCTKEGI 649
>gi|413952128|gb|AFW84777.1| hypothetical protein ZEAMMB73_772209 [Zea mays]
Length = 519
Score = 52.0 bits (123), Expect = 8e-05, Method: Composition-based stats.
Identities = 32/133 (24%), Positives = 62/133 (46%), Gaps = 1/133 (0%)
Query: 1 MISAFCRSGC-FEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDEL 59
+++ +C C E K+ E K DV+ SM+ + + G ++SVM + +++E
Sbjct: 245 VLNGWCNIVCSVREAKRFWSSMERKGIARDVLSYGSMISCFSKAGSLDSVMKLFNRMNEA 304
Query: 60 AISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEA 119
++PD ++ ++ K + A + M K P+ +SLI L K R EA
Sbjct: 305 GVAPDRKVYNAIVFALAKGRCVKEAKMLVRSMEEKQVAPDTATFNSLIGPLCKARQFQEA 364
Query: 120 LSVYNMLRYSKRS 132
+ +++ + K S
Sbjct: 365 MEMFDAMLQRKLS 377
>gi|255579531|ref|XP_002530608.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223529856|gb|EEF31788.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 596
Score = 52.0 bits (123), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 27/107 (25%), Positives = 53/107 (49%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ +CR G E K + + D+V+ N++L AY G M +++++
Sbjct: 251 LLYGWCREGKLIEAKHVLVQMREAGFEPDIVVFNNLLSAYSMAGKMTDAFDLLKEMVRKG 310
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLI 107
P+ N++ I+I+ FC ++ A R V+M R G + + ++LI
Sbjct: 311 CEPNANSYTIMIQAFCSQEKMDEAMRVFVEMERTGCEADVVTYTALI 357
Score = 45.1 bits (105), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 30/136 (22%), Positives = 60/136 (44%), Gaps = 4/136 (2%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ A C++G ++ L D ++ + S+L +CR G + HV+ ++ E
Sbjct: 217 LLDALCKNGSVKQAASLFEDMRVRFSP-SLRHFTSLLYGWCREGKLIEAKHVLVQMREAG 275
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
PD F+ L+ + A+ + +M RKG +P + +I EA+
Sbjct: 276 FEPDIVVFNNLLSAYSMAGKMTDAFDLLKEMVRKGCEPNANSYTIMIQAFCSQEKMDEAM 335
Query: 121 SVYNMLRYSKRSMCKA 136
V+ + +R+ C+A
Sbjct: 336 RVFVEM---ERTGCEA 348
>gi|242036829|ref|XP_002465809.1| hypothetical protein SORBIDRAFT_01g046200 [Sorghum bicolor]
gi|241919663|gb|EER92807.1| hypothetical protein SORBIDRAFT_01g046200 [Sorghum bicolor]
Length = 649
Score = 52.0 bits (123), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 41/156 (26%), Positives = 72/156 (46%), Gaps = 10/156 (6%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I +CR G FE+ QL + + DVV NS++ CR GD+ + +
Sbjct: 408 LIHGYCRDGNFEKALQLFDTLLHQRLRPDVVAYNSLIDGMCRKGDLAKANELWDDMHARE 467
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
I P++ T+ ILI C++ A+ + +M KG+ P +S+I G R+ +
Sbjct: 468 IFPNHVTYSILIDSHCEKGQVEEAFGFLDEMVSKGNLPNIMTYNSII--KGYCRSGN--- 522
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLKDAYI 156
++ ++ + K + + IL LI+ L YI
Sbjct: 523 -----VKKGQQFLQKMMQDNILPDLITFNTLIHGYI 553
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/99 (27%), Positives = 47/99 (47%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I A R+G + L K K +V NS+L C+ + V R +D+ +
Sbjct: 198 LIDARFRAGDVDAAIALVDSMANKGLKPGIVTFNSVLKGLCKHRRFDKAKEVFRAMDQCS 257
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPE 99
++PD +F+ILI FC+ A + +M ++G P+
Sbjct: 258 VAPDVRSFNILIGGFCRVGEVEEAMKFYKEMQQRGVTPD 296
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/123 (24%), Positives = 59/123 (47%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I + C G EE + +K + +++ NS++ YCR+G+++ ++K+ +
Sbjct: 478 LIDSHCEKGQVEEAFGFLDEMVSKGNLPNIMTYNSIIKGYCRSGNVKKGQQFLQKMMQDN 537
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
I PD TF+ LI + KE+ A+ M ++ QP+ + +I + EA
Sbjct: 538 ILPDLITFNTLIHGYIKEENMHGAFNVFNIMEKEMVQPDAVTYNMIINGFSEQGNMEEAG 597
Query: 121 SVY 123
V+
Sbjct: 598 RVF 600
Score = 42.0 bits (97), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 24/107 (22%), Positives = 49/107 (45%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I +CRSG ++ +Q D++ N+++ Y + +M +V +++
Sbjct: 513 IIKGYCRSGNVKKGQQFLQKMMQDNILPDLITFNTLIHGYIKEENMHGAFNVFNIMEKEM 572
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLI 107
+ PD T++++I F ++ A R M G +P+ SLI
Sbjct: 573 VQPDAVTYNMIINGFSEQGNMEEAGRVFKKMGASGIEPDRYTYMSLI 619
Score = 41.6 bits (96), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 27/114 (23%), Positives = 51/114 (44%), Gaps = 19/114 (16%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I FCR+G E ++ + DVV N++L C+ + ++ ++ E
Sbjct: 338 VIGGFCRAGSMSEALRVRDEMVGLGCLPDVVTYNTLLNGLCKQHRLLDAEELLNEMKERG 397
Query: 61 ISPDYNTFHILIKYFCKEKMY------------------MLAYRTMVD-MHRKG 95
++PD TF LI +C++ + ++AY +++D M RKG
Sbjct: 398 VTPDLCTFTTLIHGYCRDGNFEKALQLFDTLLHQRLRPDVVAYNSLIDGMCRKG 451
Score = 40.4 bits (93), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 27/122 (22%), Positives = 55/122 (45%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ C+ F++ K++ + DV N ++ +CR G++E M +++ +
Sbjct: 233 VLKGLCKHRRFDKAKEVFRAMDQCSVAPDVRSFNILIGGFCRVGEVEEAMKFYKEMQQRG 292
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
++PD +F LI F A + +M G P+ + + +I + + SEAL
Sbjct: 293 VTPDVVSFSCLIGLFSTRGKMDHAAAYLREMKGLGLVPDGVIYTMVIGGFCRAGSMSEAL 352
Query: 121 SV 122
V
Sbjct: 353 RV 354
Score = 40.0 bits (92), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 24/99 (24%), Positives = 44/99 (44%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I FCR G EE + + + + DVV + ++ + G M+ +R++ L
Sbjct: 268 LIGGFCRVGEVEEAMKFYKEMQQRGVTPDVVSFSCLIGLFSTRGKMDHAAAYLREMKGLG 327
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPE 99
+ PD + ++I FC+ A R +M G P+
Sbjct: 328 LVPDGVIYTMVIGGFCRAGSMSEALRVRDEMVGLGCLPD 366
Score = 39.7 bits (91), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 23/102 (22%), Positives = 48/102 (47%)
Query: 29 DVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYMLAYRTM 88
D V+ ++ +CR G M + V ++ L PD T++ L+ CK+ + A +
Sbjct: 331 DGVIYTMVIGGFCRAGSMSEALRVRDEMVGLGCLPDVVTYNTLLNGLCKQHRLLDAEELL 390
Query: 89 VDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVYNMLRYSK 130
+M +G P+ ++LI + +AL +++ L + +
Sbjct: 391 NEMKERGVTPDLCTFTTLIHGYCRDGNFEKALQLFDTLLHQR 432
Score = 39.3 bits (90), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 27/123 (21%), Positives = 57/123 (46%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
M+ ++C+S F++ + + E + DVV N ++ A R GD+++ + ++ +
Sbjct: 163 MVHSYCKSLEFDKADTVISEMEKRCVFPDVVTHNVLIDARFRAGDVDAAIALVDSMANKG 222
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ P TF+ ++K CK + + A M + P+ + LI ++ EA+
Sbjct: 223 LKPGIVTFNSVLKGLCKHRRFDKAKEVFRAMDQCSVAPDVRSFNILIGGFCRVGEVEEAM 282
Query: 121 SVY 123
Y
Sbjct: 283 KFY 285
Score = 35.0 bits (79), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 22/107 (20%), Positives = 45/107 (42%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+++ C+ + ++L + + + D+ +++ YCR G+ E + + L
Sbjct: 373 LLNGLCKQHRLLDAEELLNEMKERGVTPDLCTFTTLIHGYCRDGNFEKALQLFDTLLHQR 432
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLI 107
+ PD ++ LI C++ A DMH + P S LI
Sbjct: 433 LRPDVVAYNSLIDGMCRKGDLAKANELWDDMHAREIFPNHVTYSILI 479
>gi|225430498|ref|XP_002283327.1| PREDICTED: pentatricopeptide repeat-containing protein At4g31850,
chloroplastic [Vitis vinifera]
gi|296082142|emb|CBI21147.3| unnamed protein product [Vitis vinifera]
Length = 1113
Score = 52.0 bits (123), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 34/124 (27%), Positives = 58/124 (46%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I A C +G K+L +A K D V ++L + GD++++ +++
Sbjct: 303 LIDALCNAGKLNNAKELFLKMKASSHKPDRVTYITLLDKFSDHGDLDAIKEFWSEMEADG 362
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
PD TF ILI CK A+ T+ M ++G P ++LI L ++ EAL
Sbjct: 363 YLPDVVTFTILIDALCKVGKVDEAFGTLDVMKKQGVAPNLHTYNTLICGLLRLNRLDEAL 422
Query: 121 SVYN 124
++N
Sbjct: 423 ELFN 426
Score = 42.4 bits (98), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 37/154 (24%), Positives = 70/154 (45%), Gaps = 11/154 (7%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYD---KYDVVLLNSMLCAYCRTGDMESVMHVMRKLD 57
+I + G EE KQ FE D + L N ++ + + GD+E+ + R++
Sbjct: 899 LIDGLLKLGRLEEAKQF---FEEMLDYGCMPNCPLYNILMNGFGKQGDVETACELFRRMV 955
Query: 58 ELAISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHS 117
+ I PD ++ I++ C A ++ G P+ + +I LG+ +
Sbjct: 956 KEGIRPDLKSYSIMVDCLCMVGKVDDALHYFEELKLSGLDPDLVCYNLMINGLGRSQRVE 1015
Query: 118 EALSVYNMLRYSKRSMCKALHEK---ILHILISG 148
EALS+++ +R R + L+ IL++ I+G
Sbjct: 1016 EALSLFDEMR--NRGITPDLYTYNALILNLGIAG 1047
Score = 37.7 bits (86), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 26/114 (22%), Positives = 51/114 (44%)
Query: 29 DVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYMLAYRTM 88
++V N+ L + G +E L + ++PD T++IL++ + K A + +
Sbjct: 471 NIVACNASLYSLAEQGRLEEAKEFFNGLKKCGLAPDAITYNILMRCYGKAGRVDDAIKLL 530
Query: 89 VDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVYNMLRYSKRSMCKALHEKIL 142
+M G PE + +SLI L K EA ++ ++ K + + +L
Sbjct: 531 SEMEENGCDPEVVIINSLIDTLYKADRVDEAWKMFQRMKEMKLAPTVVTYNTLL 584
>gi|147789026|emb|CAN75781.1| hypothetical protein VITISV_012425 [Vitis vinifera]
Length = 993
Score = 52.0 bits (123), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 37/134 (27%), Positives = 65/134 (48%), Gaps = 10/134 (7%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I +C+ G EE L D +A+ K D +++++ YC GDME + + +
Sbjct: 750 LIDGYCKFGNMEEALNLLIDLKARCIKPDEFTVSALINGYCHKGDMEGALGFFFEFKKKD 809
Query: 61 ISPDYNTFHILIKYFC-KEKM--------YMLAYRTMVDM-HRKGHQPEEELCSSLIFHL 110
I PD+ F L++ C K +M ML R+++++ +R + E E S I L
Sbjct: 810 ILPDFLGFMYLVRGLCAKGRMEEARGILREMLQTRSVLELINRVDTEIETESVESFIISL 869
Query: 111 GKMRAHSEALSVYN 124
+ + EA++V N
Sbjct: 870 CEQGSIQEAVTVLN 883
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 39/76 (51%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I + C+ GC + KQL K +V + NS++ YC+ G+ME ++++ L
Sbjct: 715 LIDSLCKEGCLLDAKQLFEKMVXKGFNPNVRVYNSLIDGYCKFGNMEEALNLLIDLKARC 774
Query: 61 ISPDYNTFHILIKYFC 76
I PD T LI +C
Sbjct: 775 IKPDEFTVSALINGYC 790
Score = 44.7 bits (104), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 30/126 (23%), Positives = 57/126 (45%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ A + G E L E + +DVV +S +C Y R G + + +++ E
Sbjct: 129 LLGALFQLGRVREVSDLVSWMEREEFVFDVVFYSSWICGYFREGVLVEAIRKHKEMIEKG 188
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
I+PD ++ ILI F +E A + M + G +P ++++ K EA
Sbjct: 189 IAPDTVSYTILIDGFSREGYVEKAIGFLEKMKKDGLKPNLVTYTAIMLGFCKKGKLDEAY 248
Query: 121 SVYNML 126
+++ M+
Sbjct: 249 TLFKMV 254
Score = 44.7 bits (104), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 37/148 (25%), Positives = 61/148 (41%), Gaps = 4/148 (2%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
MI C+ G ++ L + K ++ NS++ CR G + + L+++
Sbjct: 645 MIDVLCKEGHLDKALDLCAFVKKKGIALNIYAYNSVINGLCRQGCLVQAFRLFDSLEKID 704
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ P T+ LI CKE + A + M KG P + +SLI K EAL
Sbjct: 705 LVPSEITYATLIDSLCKEGCLLDAKQLFEKMVXKGFNPNVRVYNSLIDGYCKFGNMEEAL 764
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISG 148
+ L ++ C E + LI+G
Sbjct: 765 N----LLIDLKARCIKPDEFTVSALING 788
Score = 40.0 bits (92), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 33/150 (22%), Positives = 59/150 (39%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I F R G E+ + K ++V +++ +C+ G ++ + + ++ L
Sbjct: 199 LIDGFSREGYVEKAIGFLEKMKKDGLKPNLVTYTAIMLGFCKKGKLDEAYTLFKMVENLG 258
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
I D + LI FC + + DM ++G P +S+I L K SEA
Sbjct: 259 IEVDEFMYVTLIDGFCTRGDIDCVFGLLEDMEKRGISPSIVTYNSIINGLCKAGRTSEAD 318
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKL 150
V + + LH I + G L
Sbjct: 319 EVSKGIAGDAVTFSTLLHGYIEEENVKGIL 348
>gi|4038037|gb|AAC97219.1| hypothetical protein [Arabidopsis thaliana]
Length = 1107
Score = 52.0 bits (123), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 36/127 (28%), Positives = 60/127 (47%), Gaps = 6/127 (4%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYD---KYDVVLLNSMLCAYCRTGDMESVMHVMRKLD 57
MI F + G ++T FE D + DV+ N+++ +C+ G + + R++
Sbjct: 171 MIDGFGKVGRLDDTVCF---FEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMK 227
Query: 58 ELAISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHS 117
+ P+ ++ L+ FCKE M A + VDM R G P E +SLI K+ S
Sbjct: 228 GNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLS 287
Query: 118 EALSVYN 124
+A + N
Sbjct: 288 DAFRLGN 294
Score = 40.8 bits (94), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 29/127 (22%), Positives = 54/127 (42%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
MI C+ G E + L + + + D V NSM+ + + G ++ + ++ ++
Sbjct: 136 MIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGRLDDTVCFFEEMKDMC 195
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
PD T++ LI FCK + +M G +P S+L+ K +A+
Sbjct: 196 CEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAI 255
Query: 121 SVYNMLR 127
Y +R
Sbjct: 256 KFYVDMR 262
>gi|359493285|ref|XP_003634559.1| PREDICTED: pentatricopeptide repeat-containing protein At5g57250,
mitochondrial-like [Vitis vinifera]
Length = 993
Score = 52.0 bits (123), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 37/134 (27%), Positives = 65/134 (48%), Gaps = 10/134 (7%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I +C+ G EE L D +A+ K D +++++ YC GDME + + +
Sbjct: 750 LIDGYCKFGNMEEALNLLIDLKARCIKPDEFTVSALINGYCHKGDMEGALGFFFEFKKKD 809
Query: 61 ISPDYNTFHILIKYFC-KEKM--------YMLAYRTMVDM-HRKGHQPEEELCSSLIFHL 110
I PD+ F L++ C K +M ML R+++++ +R + E E S I L
Sbjct: 810 ILPDFLGFMYLVRGLCAKGRMEEARGILREMLQTRSVLELINRVDTEIETESVESFIISL 869
Query: 111 GKMRAHSEALSVYN 124
+ + EA++V N
Sbjct: 870 CEQGSIQEAVTVLN 883
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 39/76 (51%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I + C+ GC + KQL K +V + NS++ YC+ G+ME ++++ L
Sbjct: 715 LIDSLCKEGCLLDAKQLFEKMVIKGFNPNVRVYNSLIDGYCKFGNMEEALNLLIDLKARC 774
Query: 61 ISPDYNTFHILIKYFC 76
I PD T LI +C
Sbjct: 775 IKPDEFTVSALINGYC 790
Score = 44.7 bits (104), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 30/126 (23%), Positives = 57/126 (45%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ A + G E L E + +DVV +S +C Y R G + + +++ E
Sbjct: 129 LLGALFQLGRVREVSDLVSWMEREEFVFDVVFYSSWICGYFREGVLVEAIRKHKEMIEKG 188
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
I+PD ++ ILI F +E A + M + G +P ++++ K EA
Sbjct: 189 IAPDTVSYTILIDGFSREGYVEKAIGFLEKMKKDGLKPNLVTYTAIMLGFCKKGKLDEAY 248
Query: 121 SVYNML 126
+++ M+
Sbjct: 249 TLFKMV 254
Score = 43.9 bits (102), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 37/148 (25%), Positives = 61/148 (41%), Gaps = 4/148 (2%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
MI C+ G ++ L + K ++ NS++ CR G + + L+++
Sbjct: 645 MIDVLCKEGHLDKALDLCAFVKKKGIALNIYAYNSVINGLCRQGCLVQAFRLFDSLEKID 704
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ P T+ LI CKE + A + M KG P + +SLI K EAL
Sbjct: 705 LVPSEITYATLIDSLCKEGCLLDAKQLFEKMVIKGFNPNVRVYNSLIDGYCKFGNMEEAL 764
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISG 148
+ L ++ C E + LI+G
Sbjct: 765 N----LLIDLKARCIKPDEFTVSALING 788
Score = 40.0 bits (92), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 33/150 (22%), Positives = 59/150 (39%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I F R G E+ + K ++V +++ +C+ G ++ + + ++ L
Sbjct: 199 LIDGFSREGYVEKAIGFLEKMKKDGLKPNLVTYTAIMLGFCKKGKLDEAYTLFKMVENLG 258
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
I D + LI FC + + DM ++G P +S+I L K SEA
Sbjct: 259 IEVDEFMYVTLIDGFCTRGDIDCVFGLLEDMEKRGISPSIVTYNSIINGLCKAGRTSEAD 318
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKL 150
V + + LH I + G L
Sbjct: 319 EVSKGIAGDAVTFSTLLHGYIEEENVKGIL 348
>gi|242067062|ref|XP_002454820.1| hypothetical protein SORBIDRAFT_04g038070 [Sorghum bicolor]
gi|241934651|gb|EES07796.1| hypothetical protein SORBIDRAFT_04g038070 [Sorghum bicolor]
Length = 600
Score = 52.0 bits (123), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 34/123 (27%), Positives = 55/123 (44%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I +CR+G EE +L G+ EA V N++L C G M+ V ++ ++DE
Sbjct: 295 LIDGYCRAGNIEEAVKLRGEMEATGMLPGVATYNAILRKLCEDGKMKEVNQLLNEMDERK 354
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ D+ T + LI +CK A + M G Q + +LI K + EA
Sbjct: 355 VQADHVTCNTLINAYCKRGHMTSACKVKKKMMESGLQLNQFTYKALIHGFCKAKELDEAK 414
Query: 121 SVY 123
+
Sbjct: 415 EAF 417
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/107 (28%), Positives = 48/107 (44%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ C G +E QL + + + + D V N+++ AYC+ G M S V +K+ E
Sbjct: 330 ILRKLCEDGKMKEVNQLLNEMDERKVQADHVTCNTLINAYCKRGHMTSACKVKKKMMESG 389
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLI 107
+ + T+ LI FCK K A M G P + S L+
Sbjct: 390 LQLNQFTYKALIHGFCKAKELDEAKEAFFQMVDAGFSPNYSVFSWLV 436
Score = 45.1 bits (105), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 22/107 (20%), Positives = 51/107 (47%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C+ G +E QL + A D V +++ YCR G++E + + +++
Sbjct: 260 LIHGLCKYGRVKEAAQLFTEMAAAQATPDNVTYTTLIDGYCRAGNIEEAVKLRGEMEATG 319
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLI 107
+ P T++ +++ C++ + + +M + Q + C++LI
Sbjct: 320 MLPGVATYNAILRKLCEDGKMKEVNQLLNEMDERKVQADHVTCNTLI 366
>gi|359497112|ref|XP_003635427.1| PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
mitochondrial-like [Vitis vinifera]
Length = 740
Score = 52.0 bits (123), Expect = 9e-05, Method: Composition-based stats.
Identities = 34/127 (26%), Positives = 61/127 (48%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I AF R G +E +L D + D + N ++ A CR G++E + + +
Sbjct: 553 LIHAFLRRGAMQEALKLVNDMLFRGCPLDDITYNGLIKALCRAGNIEKGLALFEDMMSKG 612
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
++P+ + +ILI C+ A + DM +G P+ +SLI L K EAL
Sbjct: 613 LNPNNISCNILINGLCRTGNIQHALEFLRDMIHRGLTPDIVTYNSLINGLCKTGRAQEAL 672
Query: 121 SVYNMLR 127
++++ L+
Sbjct: 673 NLFDKLQ 679
Score = 51.6 bits (122), Expect = 1e-04, Method: Composition-based stats.
Identities = 30/123 (24%), Positives = 60/123 (48%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C+ G ++L + + K + +V+ ++ +C+ G +E +V+ ++
Sbjct: 413 LILGLCKKGYLVSARELMNEMQIKGCEPNVITYTILIDRFCKEGRLEEARNVLDEMSGKG 472
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
++ + ++ LI CK++ A DM KG +P+ +SLIF L K+ EAL
Sbjct: 473 LALNAVGYNCLISALCKDEKVQDALNMFGDMSSKGCKPDIFTFNSLIFGLCKVNKFEEAL 532
Query: 121 SVY 123
+Y
Sbjct: 533 GLY 535
Score = 50.4 bits (119), Expect = 2e-04, Method: Composition-based stats.
Identities = 28/100 (28%), Positives = 48/100 (48%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ CR+G + + D + D+V NS++ C+TG + +++ KL
Sbjct: 623 LINGLCRTGNIQHALEFLRDMIHRGLTPDIVTYNSLINGLCKTGRAQEALNLFDKLQVEG 682
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEE 100
I PD T++ LI + CKE M+ A+ + G P E
Sbjct: 683 ICPDAITYNTLISWHCKEGMFDDAHLLLSRGVDSGFIPNE 722
Score = 42.4 bits (98), Expect = 0.067, Method: Composition-based stats.
Identities = 30/124 (24%), Positives = 52/124 (41%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I FC+ G EE + + + K + V N ++ A C+ ++ +++ +
Sbjct: 448 LIDRFCKEGRLEEARNVLDEMSGKGLALNAVGYNCLISALCKDEKVQDALNMFGDMSSKG 507
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
PD TF+ LI CK + A DM +G ++LI + A EAL
Sbjct: 508 CKPDIFTFNSLIFGLCKVNKFEEALGLYQDMLLEGVIANTITYNTLIHAFLRRGAMQEAL 567
Query: 121 SVYN 124
+ N
Sbjct: 568 KLVN 571
Score = 40.8 bits (94), Expect = 0.17, Method: Composition-based stats.
Identities = 27/99 (27%), Positives = 46/99 (46%), Gaps = 5/99 (5%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRK-LDEL 59
++ CR G +E + L K +VVL N+++ Y G ++ VM + + +
Sbjct: 346 LMHGLCRMGKVDEARMLLN----KVPNPNVVLFNTLINGYVSRGRLDEAKAVMHESMLSV 401
Query: 60 AISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQP 98
PD T++ LI CK+ + A M +M KG +P
Sbjct: 402 GCGPDIFTYNTLILGLCKKGYLVSARELMNEMQIKGCEP 440
Score = 36.6 bits (83), Expect = 3.3, Method: Composition-based stats.
Identities = 21/95 (22%), Positives = 43/95 (45%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+ISA C+ ++ + GD +K K D+ NS++ C+ E + + + +
Sbjct: 483 LISALCKDEKVQDALNMFGDMSSKGCKPDIFTFNSLIFGLCKVNKFEEALGLYQDMLLEG 542
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKG 95
+ + T++ LI F + A + + DM +G
Sbjct: 543 VIANTITYNTLIHAFLRRGAMQEALKLVNDMLFRG 577
>gi|302780485|ref|XP_002972017.1| hypothetical protein SELMODRAFT_96794 [Selaginella moellendorffii]
gi|300160316|gb|EFJ26934.1| hypothetical protein SELMODRAFT_96794 [Selaginella moellendorffii]
Length = 1116
Score = 52.0 bits (123), Expect = 9e-05, Method: Composition-based stats.
Identities = 29/127 (22%), Positives = 62/127 (48%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ C++G FE+ L + AK + DV+ +++ C+ G +E+ ++ + L
Sbjct: 573 LIAGACKAGNFEQASALFEEMVAKNLQPDVMTFGALIDGLCKAGQVEAARDILDLMGNLG 632
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ P+ T++ L+ CK A + + +M G P+ SL++ L + +AL
Sbjct: 633 VPPNVVTYNALVHGLCKSGRIEEACQFLEEMVSSGCVPDSITYGSLVYALCRASRTDDAL 692
Query: 121 SVYNMLR 127
+ + L+
Sbjct: 693 QLVSELK 699
Score = 47.0 bits (110), Expect = 0.003, Method: Composition-based stats.
Identities = 36/148 (24%), Positives = 64/148 (43%), Gaps = 1/148 (0%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ C+SG EE Q + + D + S++ A CR + + ++ +L
Sbjct: 643 LVHGLCKSGRIEEACQFLEEMVSSGCVPDSITYGSLVYALCRASRTDDALQLVSELKSFG 702
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
PD T++IL+ K A + +M KGH P+ ++LI L K EA
Sbjct: 703 WDPDTVTYNILVDGLWKSGQTEQAITVLEEMVGKGHHPDVVTYNTLIDSLCKAGDLEEAR 762
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISG 148
++ + S+ S C + +LI+G
Sbjct: 763 RLHGDMS-SRVSRCCVPNVVTYSVLING 789
Score = 46.2 bits (108), Expect = 0.004, Method: Composition-based stats.
Identities = 30/124 (24%), Positives = 54/124 (43%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C+ G +E + D A +VV N ++ C+T ME ++ + +
Sbjct: 860 LIDGLCKCGQTDEACNVFDDMIAGGYVPNVVTYNVLMNGLCKTDKMERAHAMIESMVDKG 919
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
++PD T+ +L+ FCK A + M +G P +S+I L K EA
Sbjct: 920 VTPDVITYSVLVDAFCKASHVDEALELLHGMASRGCTPNVVTFNSIIDGLCKSDQSGEAF 979
Query: 121 SVYN 124
+++
Sbjct: 980 QMFD 983
Score = 45.1 bits (105), Expect = 0.009, Method: Composition-based stats.
Identities = 28/124 (22%), Positives = 54/124 (43%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C+ G +E + D A +V+ N+++ C+ ME ++ + +
Sbjct: 366 LIDGLCKCGQIDEACSVFDDMIAGGYVPNVITYNALVNGLCKADKMERAHAMIESMVDKG 425
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
++PD T+ +L+ FCK A + M +G P +S+I L K EA
Sbjct: 426 VTPDVITYSVLVDAFCKASRVDEALELLHGMASRGCTPNVVTFNSIIDGLCKSDRSGEAF 485
Query: 121 SVYN 124
+++
Sbjct: 486 QMFD 489
Score = 40.4 bits (93), Expect = 0.27, Method: Composition-based stats.
Identities = 42/154 (27%), Positives = 65/154 (42%), Gaps = 16/154 (10%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKY--DVVLLNSMLCAYCRTGDMESVMHVMRKLDE 58
+I+ C+ G +E ++L + K +++ NS L C+ M +MR L +
Sbjct: 786 LINGLCKVGRIDEARELIQEMMRKSCDVLPNIITYNSFLDGLCKQSMMAEACELMRSLRD 845
Query: 59 --LAISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKM--- 113
L +SPD TF LI CK A DM G+ P + L+ L K
Sbjct: 846 GSLRVSPDTVTFSTLIDGLCKCGQTDEACNVFDDMIAGGYVPNVVTYNVLMNGLCKTDKM 905
Query: 114 -RAHSEALSVY------NMLRYS--KRSMCKALH 138
RAH+ S+ +++ YS + CKA H
Sbjct: 906 ERAHAMIESMVDKGVTPDVITYSVLVDAFCKASH 939
Score = 38.9 bits (89), Expect = 0.72, Method: Composition-based stats.
Identities = 34/125 (27%), Positives = 53/125 (42%), Gaps = 8/125 (6%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKY--DVVLLNSMLCAYCRTGDMESVMHVMRKLDE 58
+I+ C+ G +E ++L + K +++ NS L C+ +MR L +
Sbjct: 292 LINGLCKVGRIDEARELIQEMTRKSCDVLPNIITYNSFLDGLCKQSMTAEACELMRSLRD 351
Query: 59 --LAISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKM--- 113
L +SPD TF LI CK A DM G+ P ++L+ L K
Sbjct: 352 GSLRVSPDTVTFSTLIDGLCKCGQIDEACSVFDDMIAGGYVPNVITYNALVNGLCKADKM 411
Query: 114 -RAHS 117
RAH+
Sbjct: 412 ERAHA 416
Score = 38.5 bits (88), Expect = 1.0, Method: Composition-based stats.
Identities = 31/112 (27%), Positives = 47/112 (41%), Gaps = 3/112 (2%)
Query: 18 AGDFEAKYDKY---DVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKY 74
AG EA D D N + + GD+ + V ++ EL + PD TF+ILI
Sbjct: 517 AGQAEALLDAMPDPDTYAFNCCINGLSKLGDVSRALQVYNRMLELELVPDKVTFNILIAG 576
Query: 75 FCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVYNML 126
CK + A +M K QP+ +LI L K A + +++
Sbjct: 577 ACKAGNFEQASALFEEMVAKNLQPDVMTFGALIDGLCKAGQVEAARDILDLM 628
Score = 37.7 bits (86), Expect = 1.8, Method: Composition-based stats.
Identities = 30/129 (23%), Positives = 54/129 (41%), Gaps = 2/129 (1%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ C+S +L + + DVV N+++ + C+ GD+E + + +
Sbjct: 222 IINGLCKSNELGAGMELFEELVERGHHPDVVTYNTLIDSLCKAGDLEEARRLHGDMSSRS 281
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQ--PEEELCSSLIFHLGKMRAHSE 118
P+ T+ +LI CK A + +M RK P +S + L K +E
Sbjct: 282 CVPNVVTYSVLINGLCKVGRIDEARELIQEMTRKSCDVLPNIITYNSFLDGLCKQSMTAE 341
Query: 119 ALSVYNMLR 127
A + LR
Sbjct: 342 ACELMRSLR 350
>gi|147798083|emb|CAN67256.1| hypothetical protein VITISV_039434 [Vitis vinifera]
Length = 722
Score = 52.0 bits (123), Expect = 9e-05, Method: Composition-based stats.
Identities = 34/127 (26%), Positives = 61/127 (48%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I AF R G +E +L D + D + N ++ A CR G++E + + +
Sbjct: 535 LIHAFLRRGAMQEALKLVNDMLFRGCPLDDITYNGLIKALCRAGNIEKGLALFEDMMSKG 594
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
++P+ + +ILI C+ A + DM +G P+ +SLI L K EAL
Sbjct: 595 LNPNNISCNILINGLCRTGNIQHALEFLRDMIHRGLTPDIVTYNSLINGLCKTGRAQEAL 654
Query: 121 SVYNMLR 127
++++ L+
Sbjct: 655 NLFDKLQ 661
Score = 51.6 bits (122), Expect = 1e-04, Method: Composition-based stats.
Identities = 30/123 (24%), Positives = 60/123 (48%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C+ G ++L + + K + +V+ ++ +C+ G +E +V+ ++
Sbjct: 395 LILGLCKKGYLVSARELMNEMQIKGCEPNVITYTILIDRFCKEGRLEEARNVLDEMSGKG 454
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
++ + ++ LI CK++ A DM KG +P+ +SLIF L K+ EAL
Sbjct: 455 LALNAVGYNCLISALCKDEKVQDALNMFGDMSSKGCKPDIFTFNSLIFGLCKVNKFEEAL 514
Query: 121 SVY 123
+Y
Sbjct: 515 GLY 517
Score = 50.4 bits (119), Expect = 2e-04, Method: Composition-based stats.
Identities = 28/100 (28%), Positives = 48/100 (48%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ CR+G + + D + D+V NS++ C+TG + +++ KL
Sbjct: 605 LINGLCRTGNIQHALEFLRDMIHRGLTPDIVTYNSLINGLCKTGRAQEALNLFDKLQVEG 664
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEE 100
I PD T++ LI + CKE M+ A+ + G P E
Sbjct: 665 ICPDAITYNTLISWHCKEGMFDDAHLLLSRGVDSGFIPNE 704
Score = 42.4 bits (98), Expect = 0.069, Method: Composition-based stats.
Identities = 30/124 (24%), Positives = 52/124 (41%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I FC+ G EE + + + K + V N ++ A C+ ++ +++ +
Sbjct: 430 LIDRFCKEGRLEEARNVLDEMSGKGLALNAVGYNCLISALCKDEKVQDALNMFGDMSSKG 489
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
PD TF+ LI CK + A DM +G ++LI + A EAL
Sbjct: 490 CKPDIFTFNSLIFGLCKVNKFEEALGLYQDMLLEGVIANTITYNTLIHAFLRRGAMQEAL 549
Query: 121 SVYN 124
+ N
Sbjct: 550 KLVN 553
Score = 40.8 bits (94), Expect = 0.17, Method: Composition-based stats.
Identities = 27/99 (27%), Positives = 46/99 (46%), Gaps = 5/99 (5%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRK-LDEL 59
++ CR G +E + L K +VVL N+++ Y G ++ VM + + +
Sbjct: 328 LMHGLCRMGKVDEARMLLN----KVPNPNVVLFNTLINGYVSRGRLDEAKAVMHESMLSV 383
Query: 60 AISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQP 98
PD T++ LI CK+ + A M +M KG +P
Sbjct: 384 GCGPDIFTYNTLILGLCKKGYLVSARELMNEMQIKGCEP 422
Score = 36.6 bits (83), Expect = 3.3, Method: Composition-based stats.
Identities = 21/95 (22%), Positives = 43/95 (45%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+ISA C+ ++ + GD +K K D+ NS++ C+ E + + + +
Sbjct: 465 LISALCKDEKVQDALNMFGDMSSKGCKPDIFTFNSLIFGLCKVNKFEEALGLYQDMLLEG 524
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKG 95
+ + T++ LI F + A + + DM +G
Sbjct: 525 VIANTITYNTLIHAFLRRGAMQEALKLVNDMLFRG 559
>gi|144923530|gb|ABE80159.2| Tetratricopeptide-like helical [Medicago truncatula]
Length = 695
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/165 (22%), Positives = 71/165 (43%), Gaps = 12/165 (7%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C+ G + L + D V NS++ C G + V ++ K+
Sbjct: 201 LIDGLCKDGFVSDALGLCSQIGERGILLDAVTYNSLIDGCCSVGRWQEVTQLLTKMVREN 260
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ PD TF+ILI CKE + A + M ++G +P+ ++ + M +
Sbjct: 261 VDPDDYTFNILIDALCKEGRILEAQGVLAMMSKRGEKPD------IVTYNALMEGYCSRE 314
Query: 121 SVYNMLRYSKRSMCKALHEKIL--HILISG----KLLKDAYIVVK 159
+V+ R + + L +L ++LI G K++ +A ++ K
Sbjct: 315 NVHEARELFNRMVKRGLEPDVLNYNVLIDGYCKTKMVDEAMVLFK 359
Score = 45.8 bits (107), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 33/147 (22%), Positives = 64/147 (43%), Gaps = 1/147 (0%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C G ++L + DV+ N +L A+C+T + + + R++ E
Sbjct: 516 LIDGLCNLGRIPHVQELLDEMCDSGQSPDVITYNILLDAFCKTQPFDKAISLFRQIVE-G 574
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
I PD+ T H ++ CK + +A + + G P + + LI L K + EA+
Sbjct: 575 IWPDFYTNHAIVDNLCKGEKLKMAEDALKHLLMHGCSPNVQTYTILINALCKDGSFGEAM 634
Query: 121 SVYNMLRYSKRSMCKALHEKILHILIS 147
+ + + + R E I+ +L+
Sbjct: 635 LLLSKMEDNDRPPDAITFEIIIGVLLQ 661
Score = 44.7 bits (104), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 49/102 (48%), Gaps = 6/102 (5%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDEL- 59
+I +C++ +E L + K + NS++ C +G + HV + LDE+
Sbjct: 341 LIDGYCKTKMVDEAMVLFKELCNKNLVPTIASYNSLIDGLCNSG---RISHVKKLLDEMH 397
Query: 60 --AISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPE 99
A PD T++ILI CKE + A +V M +KG +P
Sbjct: 398 GSAQPPDVVTYNILIDALCKEGRILEALGVLVMMMKKGVKPN 439
Score = 39.7 bits (91), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 27/128 (21%), Positives = 55/128 (42%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C SG K+L + DVV N ++ A C+ G + + V+ + +
Sbjct: 376 LIDGLCNSGRISHVKKLLDEMHGSAQPPDVVTYNILIDALCKEGRILEALGVLVMMMKKG 435
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ P+ T++ ++ +C +A M + G +P+ + LI K EA+
Sbjct: 436 VKPNIVTYNAMMDGYCLRNNVNVAKDIFNRMVKSGLEPDILNYNVLINGYCKTEMVDEAI 495
Query: 121 SVYNMLRY 128
++ +R+
Sbjct: 496 VLFKEMRH 503
Score = 39.3 bits (90), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 26/107 (24%), Positives = 48/107 (44%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I A C+ G E + K K ++V N+M+ YC ++ + ++ +
Sbjct: 411 LIDALCKEGRILEALGVLVMMMKKGVKPNIVTYNAMMDGYCLRNNVNVAKDIFNRMVKSG 470
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLI 107
+ PD +++LI +CK +M A +M K P+ +SLI
Sbjct: 471 LEPDILNYNVLINGYCKTEMVDEAIVLFKEMRHKNLIPDIASYNSLI 517
Score = 38.9 bits (89), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 20/81 (24%), Positives = 41/81 (50%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ +C++ +E L + K D+ NS++ C G + V ++ ++ +
Sbjct: 481 LINGYCKTEMVDEAIVLFKEMRHKNLIPDIASYNSLIDGLCNLGRIPHVQELLDEMCDSG 540
Query: 61 ISPDYNTFHILIKYFCKEKMY 81
SPD T++IL+ FCK + +
Sbjct: 541 QSPDVITYNILLDAFCKTQPF 561
>gi|15242557|ref|NP_195906.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75181167|sp|Q9LYZ9.1|PP362_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g02860
gi|7413561|emb|CAB86040.1| putative protein [Arabidopsis thaliana]
gi|332003145|gb|AED90528.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 819
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/193 (21%), Positives = 76/193 (39%), Gaps = 35/193 (18%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHV-------- 52
+ISA+ R G +E +L K K DV ++L + R G +ES M +
Sbjct: 355 LISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMSIFEEMRNAG 414
Query: 53 ------------------------MRKLDEL---AISPDYNTFHILIKYFCKEKMYMLAY 85
M+ DE+ +SPD T++ L+ F + M
Sbjct: 415 CKPNICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVS 474
Query: 86 RTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVYNMLRYSKRSMCKALHEKILHIL 145
+M R G PE E ++LI + + +A++VY + + + + + +L L
Sbjct: 475 GVFKEMKRAGFVPERETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAAL 534
Query: 146 ISGKLLKDAYIVV 158
G + + + V+
Sbjct: 535 ARGGMWEQSEKVL 547
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 27/113 (23%), Positives = 54/113 (47%)
Query: 7 RSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYN 66
RS F +++++ + AK K D++ N+++ AYCR M + ++ I PD
Sbjct: 676 RSADFGKSEEILREILAKGIKPDIISYNTVIYAYCRNTRMRDASRIFSEMRNSGIVPDVI 735
Query: 67 TFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEA 119
T++ I + + M+ A + M + G +P + +S++ K+ EA
Sbjct: 736 TYNTFIGSYAADSMFEEAIGVVRYMIKHGCRPNQNTYNSIVDGYCKLNRKDEA 788
Score = 43.1 bits (100), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 24/93 (25%), Positives = 49/93 (52%), Gaps = 7/93 (7%)
Query: 8 SGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNT 67
SG F+E K+ AG F + + + N+++ AY R G E M V R++ + ++PD +T
Sbjct: 474 SGVFKEMKR-AG-FVPERETF-----NTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLST 526
Query: 68 FHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEE 100
++ ++ + M+ + + + +M +P E
Sbjct: 527 YNTVLAALARGGMWEQSEKVLAEMEDGRCKPNE 559
Score = 39.3 bits (90), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 30/132 (22%), Positives = 61/132 (46%), Gaps = 3/132 (2%)
Query: 6 CRSGCF-EETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPD 64
C+ G +E Q+ + +A YD V N++L Y ++ + M V+ ++ SP
Sbjct: 289 CKRGSLHQEAAQVFEEMKAAGFSYDKVTYNALLDVYGKSHRPKEAMKVLNEMVLNGFSPS 348
Query: 65 YNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVYN 124
T++ LI + ++ M A M KG +P+ ++L+ + A+S++
Sbjct: 349 IVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMSIFE 408
Query: 125 MLRYS--KRSMC 134
+R + K ++C
Sbjct: 409 EMRNAGCKPNIC 420
Score = 35.4 bits (80), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 21/95 (22%), Positives = 41/95 (43%)
Query: 30 VVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYMLAYRTMV 89
+V NS++ AY R G ++ M + ++ E PD T+ L+ F + A
Sbjct: 349 IVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMSIFE 408
Query: 90 DMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVYN 124
+M G +P ++ I G +E + +++
Sbjct: 409 EMRNAGCKPNICTFNAFIKMYGNRGKFTEMMKIFD 443
>gi|414591141|tpg|DAA41712.1| TPA: hypothetical protein ZEAMMB73_063178 [Zea mays]
Length = 374
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/98 (25%), Positives = 46/98 (46%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
MI +CR G ++ ++ E + D+ N++ C CR ++ ++ + E+
Sbjct: 149 MIDGYCRKGMVDDALKIKAAMEKMGVELDIYTYNTLACGLCRVNRLDEAKTLLHIMIEMG 208
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQP 98
+ P+Y T+ LI CK+ + A R +M KG P
Sbjct: 209 VVPNYVTYTTLISIHCKDGDMVEARRLFREMAEKGATP 246
Score = 37.4 bits (85), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 19/77 (24%), Positives = 39/77 (50%)
Query: 31 VLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYMLAYRTMVD 90
V +++ +C+ GDM + R++ E +P T++++I + K+ A R +
Sbjct: 214 VTYTTLISIHCKDGDMVEARRLFREMAEKGATPSVVTYNVMIHGYAKKGSIREAERFRKE 273
Query: 91 MHRKGHQPEEELCSSLI 107
M +KG P+ +SL+
Sbjct: 274 MEKKGFVPDVYTYASLV 290
>gi|357477483|ref|XP_003609027.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355510082|gb|AES91224.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 583
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/126 (26%), Positives = 60/126 (47%), Gaps = 3/126 (2%)
Query: 2 ISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCR---TGDMESVMHVMRKLDE 58
I+ CR+G + + D +A +VV N+++ YC+ G M M+++
Sbjct: 207 INGLCRAGKLNKAEDAIEDMKAWGISPNVVTYNTLVDGYCKRGSAGKMYKAEAFMKEMLA 266
Query: 59 LAISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSE 118
I P+ TF+ LI FCK++ A + +M ++G +P +SLI L E
Sbjct: 267 NKICPNEVTFNTLIDGFCKDENVAAAKKAFEEMQKQGLKPNIVTYNSLINGLCNNGKLEE 326
Query: 119 ALSVYN 124
A+ +++
Sbjct: 327 AIDLWD 332
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/127 (25%), Positives = 58/127 (45%), Gaps = 20/127 (15%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I FC+ K+ + + + K ++V NS++ C G +E + + K+ L
Sbjct: 279 LIDGFCKDENVAAAKKAFEEMQKQGLKPNIVTYNSLINGLCNNGKLEEAIDLWDKMVGLG 338
Query: 61 ISPDYNTFHILIKYFCKEKM------------------YMLAYRTMVDMHRKGHQPEE-- 100
+ P+ T++ LI FCK+KM ++ + TM+D + K EE
Sbjct: 339 LKPNIVTYNALINGFCKKKMMKEATKVFDDVSKQELVPNVITFNTMIDAYCKEGMMEEGF 398
Query: 101 ELCSSLI 107
LCSS++
Sbjct: 399 SLCSSML 405
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/95 (25%), Positives = 48/95 (50%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ FC+ +E ++ D + +V+ N+M+ AYC+ G ME + + +
Sbjct: 349 LINGFCKKKMMKEATKVFDDVSKQELVPNVITFNTMIDAYCKEGMMEEGFSLCSSMLDEG 408
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKG 95
I P+ +T++ LI C+++ A + +M KG
Sbjct: 409 ILPNVSTYNCLIAGLCRKQDLQAAKELLNEMENKG 443
Score = 45.1 bits (105), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 23/99 (23%), Positives = 45/99 (45%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ CR + K+L + E K K DVV N ++ C+ + ++ ++ L
Sbjct: 419 LIAGLCRKQDLQAAKELLNEMENKGLKGDVVTYNILIDGLCKNDKSRNAEKLLNEMFNLG 478
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPE 99
+ P++ T++ L+ +C E A M ++ QP
Sbjct: 479 LKPNHVTYNTLMDGYCMEGKLKAALNVRTRMEKERKQPN 517
Score = 43.1 bits (100), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 24/99 (24%), Positives = 45/99 (45%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
MI A+C+ G EE L + +V N ++ CR D+++ ++ +++
Sbjct: 384 MIDAYCKEGMMEEGFSLCSSMLDEGILPNVSTYNCLIAGLCRKQDLQAAKELLNEMENKG 443
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPE 99
+ D T++ILI CK A + + +M G +P
Sbjct: 444 LKGDVVTYNILIDGLCKNDKSRNAEKLLNEMFNLGLKPN 482
Score = 41.6 bits (96), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 26/110 (23%), Positives = 47/110 (42%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ C +G EE L K ++V N+++ +C+ M+ V + +
Sbjct: 314 LINGLCNNGKLEEAIDLWDKMVGLGLKPNIVTYNALINGFCKKKMMKEATKVFDDVSKQE 373
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHL 110
+ P+ TF+ +I +CKE M + M +G P + LI L
Sbjct: 374 LVPNVITFNTMIDAYCKEGMMEEGFSLCSSMLDEGILPNVSTYNCLIAGL 423
Score = 39.7 bits (91), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 22/99 (22%), Positives = 48/99 (48%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C++ ++L + K + V N+++ YC G +++ ++V ++++
Sbjct: 454 LIDGLCKNDKSRNAEKLLNEMFNLGLKPNHVTYNTLMDGYCMEGKLKAALNVRTRMEKER 513
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPE 99
P+ T+++LIK +CK A + +M KG P
Sbjct: 514 KQPNVVTYNVLIKGYCKINKLEAANGLLNEMLEKGLNPN 552
>gi|302781562|ref|XP_002972555.1| hypothetical protein SELMODRAFT_97527 [Selaginella moellendorffii]
gi|300160022|gb|EFJ26641.1| hypothetical protein SELMODRAFT_97527 [Selaginella moellendorffii]
Length = 564
Score = 51.6 bits (122), Expect = 1e-04, Method: Composition-based stats.
Identities = 29/127 (22%), Positives = 62/127 (48%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ C++G FE+ L + AK + DV+ +++ C+ G +E+ ++ + L
Sbjct: 297 LIAGACKAGNFEQASALFEEMVAKNLQPDVMTFGALIDGLCKAGQVEAARDILDLMGNLG 356
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ P+ T++ L+ CK A + + +M G P+ SL++ L + +AL
Sbjct: 357 VPPNVVTYNALVHGLCKSGRIEEACQFLEEMVSSGCVPDSITYGSLVYALCRASRTDDAL 416
Query: 121 SVYNMLR 127
+ + L+
Sbjct: 417 QLVSELK 423
Score = 45.8 bits (107), Expect = 0.006, Method: Composition-based stats.
Identities = 31/125 (24%), Positives = 52/125 (41%), Gaps = 3/125 (2%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ C+SG EE Q + + D + S++ A CR + + ++ +L
Sbjct: 367 LVHGLCKSGRIEEACQFLEEMVSSGCVPDSITYGSLVYALCRASRTDDALQLVSELKSFG 426
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEE---ELCSSLIFHLGKMRAHS 117
PD T++IL+ K A + +M KGHQP+ C S + G +
Sbjct: 427 WDPDTVTYNILVDGLWKSGKTEQAITVLEEMVGKGHQPDSFTFAACFSGLHRSGNLAGTM 486
Query: 118 EALSV 122
E L V
Sbjct: 487 ELLRV 491
Score = 40.8 bits (94), Expect = 0.17, Method: Composition-based stats.
Identities = 23/110 (20%), Positives = 48/110 (43%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C+ G +E + D A +V+ N+++ C+ ME ++ + +
Sbjct: 187 LIDGLCKCGQIDEACSVFDDMIAGGYVPNVITYNALVNGLCKADKMERAHAMIESMVDKG 246
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHL 110
++PD T+ +L+ FCK A + M +G P + + F++
Sbjct: 247 VTPDVITYSVLVDAFCKASRVDEALELLHGMASRGCTPNVLVPDKVTFNI 296
Score = 38.9 bits (89), Expect = 0.74, Method: Composition-based stats.
Identities = 34/125 (27%), Positives = 53/125 (42%), Gaps = 8/125 (6%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKY--DVVLLNSMLCAYCRTGDMESVMHVMRKLDE 58
+I+ C+ G +E ++L + K +++ NS L C+ +MR L +
Sbjct: 113 LINGLCKVGRIDEARELIQEMTRKSCDVLPNIITYNSFLDGLCKQSMTAEACELMRSLRD 172
Query: 59 --LAISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKM--- 113
L +SPD TF LI CK A DM G+ P ++L+ L K
Sbjct: 173 GSLRVSPDTVTFSTLIDGLCKCGQIDEACSVFDDMIAGGYVPNVITYNALVNGLCKADKM 232
Query: 114 -RAHS 117
RAH+
Sbjct: 233 ERAHA 237
Score = 38.9 bits (89), Expect = 0.80, Method: Composition-based stats.
Identities = 30/108 (27%), Positives = 47/108 (43%), Gaps = 3/108 (2%)
Query: 30 VVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYMLAYRTMV 89
+V N+++ C++ D+ + M + +L E PD T++ LI CK A R
Sbjct: 37 IVTYNTIINGLCKSNDLGAGMELFEELVERGHHPDVVTYNTLIDSLCKAGDLEEARRLHG 96
Query: 90 DMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVYNMLRYSKRSMCKAL 137
DM +G P S LI L K+ EA +++ R C L
Sbjct: 97 DMSSRGCVPNVVTYSVLINGLCKVGRIDEA---RELIQEMTRKSCDVL 141
>gi|359492658|ref|XP_002281859.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g19290-like [Vitis vinifera]
Length = 939
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/126 (20%), Positives = 67/126 (53%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I +CR+G ++ +L + K ++ + NS++ YC+ G++ V+ ++ +
Sbjct: 338 LIDGYCRTGKIDDAVRLLDEMLRLGLKTNLFICNSLINGYCKRGEIHEAEGVITRMVDWN 397
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ PD +++ L+ +C+E A+ M ++G +P ++L+ L ++ A +AL
Sbjct: 398 LKPDSYSYNTLLDGYCREGHTSEAFNLCDKMLQEGIEPTVLTYNTLLKGLCRVGAFDDAL 457
Query: 121 SVYNML 126
+++++
Sbjct: 458 QIWHLM 463
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 46/104 (44%)
Query: 11 FEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHI 70
FE L D A+ + N+M+ C+ G M + K+ +L SPD T+
Sbjct: 488 FEGASTLWKDILARGFTKSRITFNTMISGLCKMGKMVEAEEIFDKMKDLGCSPDGITYRT 547
Query: 71 LIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMR 114
LI +CK A++ M R+ P E+ +SLI L K R
Sbjct: 548 LIDGYCKASNVGQAFKVKGAMEREPISPSIEMYNSLISGLFKSR 591
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 32/126 (25%), Positives = 59/126 (46%), Gaps = 6/126 (4%)
Query: 1 MISAFCRSGCFEETKQLAG---DFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLD 57
+I+ +C+ G E + + D+ K D Y N++L YCR G ++ K+
Sbjct: 373 LINGYCKRGEIHEAEGVITRMVDWNLKPDSYS---YNTLLDGYCREGHTSEAFNLCDKML 429
Query: 58 ELAISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHS 117
+ I P T++ L+K C+ + A + M ++G P+E S+L+ L KM
Sbjct: 430 QEGIEPTVLTYNTLLKGLCRVGAFDDALQIWHLMMKRGVAPDEVGYSTLLDGLFKMENFE 489
Query: 118 EALSVY 123
A +++
Sbjct: 490 GASTLW 495
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 43/78 (55%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
M++AFC+ G +E E + ++V +S++ Y GD+E+ V++ + E
Sbjct: 232 MVNAFCKDGKVDEAAGFVKKMENLGVEPNIVTYHSLINGYVSLGDVEAAKGVLKFMSEKG 291
Query: 61 ISPDYNTFHILIKYFCKE 78
+S + T+ +LIK +CK+
Sbjct: 292 VSRNVVTYTLLIKGYCKQ 309
Score = 42.7 bits (99), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 22/77 (28%), Positives = 39/77 (50%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ C+S + ++L K +VV N+++ YC+ G+M++ + K+ E
Sbjct: 790 LINGLCKSENVDRAQRLFHKLHQKGLFPNVVTYNTLIDGYCKIGNMDAAFKLKDKMIEEG 849
Query: 61 ISPDYNTFHILIKYFCK 77
ISP T+ LI CK
Sbjct: 850 ISPSVVTYSALINGLCK 866
Score = 40.8 bits (94), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 23/119 (19%), Positives = 56/119 (47%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I +C++ + ++ G E + + + NS++ ++ + V ++ ++
Sbjct: 548 LIDGYCKASNVGQAFKVKGAMEREPISPSIEMYNSLISGLFKSRRLVEVTDLLTEMGIRG 607
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEA 119
++P+ T+ LI +CKE M A+ + +M G +CS+++ L ++ EA
Sbjct: 608 LTPNIVTYGALIDGWCKEGMLDKAFSSYFEMTENGLSANIIICSTMVSGLYRLGRIDEA 666
Score = 40.0 bits (92), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 28/108 (25%), Positives = 50/108 (46%), Gaps = 1/108 (0%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKL-DEL 59
+I+ + G E K + K +VV ++ YC+ M+ V+R + +E
Sbjct: 267 LINGYVSLGDVEAAKGVLKFMSEKGVSRNVVTYTLLIKGYCKQCKMDEAEKVLRGMQEEA 326
Query: 60 AISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLI 107
A+ PD + +LI +C+ A R + +M R G + +C+SLI
Sbjct: 327 ALVPDERAYGVLIDGYCRTGKIDDAVRLLDEMLRLGLKTNLFICNSLI 374
Score = 35.8 bits (81), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 13/47 (27%), Positives = 29/47 (61%)
Query: 29 DVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYF 75
DV +++ M+ A+C+ G ++ ++K++ L + P+ T+H LI +
Sbjct: 225 DVFMVSIMVNAFCKDGKVDEAAGFVKKMENLGVEPNIVTYHSLINGY 271
Score = 35.4 bits (80), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 24/112 (21%), Positives = 52/112 (46%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I + +G +E +L + + ++V N+++ C++ +++ + KL +
Sbjct: 755 LIHGYSAAGNVDEAFRLRDEMLRRGLVPNIVTYNALINGLCKSENVDRAQRLFHKLHQKG 814
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGK 112
+ P+ T++ LI +CK A++ M +G P S+LI L K
Sbjct: 815 LFPNVVTYNTLIDGYCKIGNMDAAFKLKDKMIEEGISPSVVTYSALINGLCK 866
>gi|356544498|ref|XP_003540687.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15630,
mitochondrial-like [Glycine max]
Length = 623
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/107 (26%), Positives = 52/107 (48%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ +CR G EE +QL + + + K D + N+++ Y + GDM+ V ++
Sbjct: 502 LMQGYCREGKVEEARQLLDEMKRRGIKPDHISYNTLISGYSKRGDMKDAFRVRDEMMTTG 561
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLI 107
P T++ LI+ CK + A + +M KG P++ S+I
Sbjct: 562 FDPTILTYNALIQGLCKNQEGEHAEELLKEMVSKGITPDDSTYLSII 608
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 21/94 (22%), Positives = 53/94 (56%)
Query: 29 DVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYMLAYRTM 88
D+++ N+++ +C G+++ +++++D + + PD T++ L++ +C+E A + +
Sbjct: 460 DIIVFNALIDGHCANGNIDRAFQLLKEMDNMKVLPDEITYNTLMQGYCREGKVEEARQLL 519
Query: 89 VDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSV 122
+M R+G +P+ ++LI K +A V
Sbjct: 520 DEMKRRGIKPDHISYNTLISGYSKRGDMKDAFRV 553
Score = 44.3 bits (103), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 30/122 (24%), Positives = 55/122 (45%), Gaps = 2/122 (1%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C +G + QL + + D + N+++ YCR G +E ++ ++
Sbjct: 467 LIDGHCANGNIDRAFQLLKEMDNMKVLPDEITYNTLMQGYCREGKVEEARQLLDEMKRRG 526
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMR--AHSE 118
I PD+ +++ LI + K A+R +M G P ++LI L K + H+E
Sbjct: 527 IKPDHISYNTLISGYSKRGDMKDAFRVRDEMMTTGFDPTILTYNALIQGLCKNQEGEHAE 586
Query: 119 AL 120
L
Sbjct: 587 EL 588
Score = 42.7 bits (99), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 26/107 (24%), Positives = 47/107 (43%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
MI+ C+ G ++ K+ G E K +VV N+++ +C G + + + + +
Sbjct: 222 MINVLCKEGKLKKAKEFIGHMETLGVKPNVVTYNTIIHGHCLRGKFQRARVIFQTMKDKG 281
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLI 107
+ PD T++ I CKE A + M G P ++LI
Sbjct: 282 LEPDCYTYNSFISGLCKEGRLEEASGLICKMLEGGLVPNAVTYNALI 328
Score = 41.2 bits (95), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 31/127 (24%), Positives = 60/127 (47%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I +C G ++ + +K +V N + A G M ++++++ E
Sbjct: 327 LIDGYCNKGDLDKAYAYRDEMISKGIMASLVTYNLFIHALFMEGRMGDADNMIKEMREKG 386
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ PD T +ILI +C+ A+ + +M KG QP +SLI+ LGK EA
Sbjct: 387 MMPDAVTHNILINGYCRCGDAKRAFGLLDEMVGKGIQPTLVTYTSLIYVLGKRNRMKEAD 446
Query: 121 SVYNMLR 127
++++ ++
Sbjct: 447 ALFSKIQ 453
>gi|242051246|ref|XP_002463367.1| hypothetical protein SORBIDRAFT_02g042500 [Sorghum bicolor]
gi|241926744|gb|EER99888.1| hypothetical protein SORBIDRAFT_02g042500 [Sorghum bicolor]
Length = 543
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 43/98 (43%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
MI +CR G + ++ E + DV N++ C CR M ++ + E
Sbjct: 313 MIDGYCRQGMVDNALKVKAAMEKMGIELDVYTYNTLACGLCRVNRMAEAKTLLHIMIEKG 372
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQP 98
+ P+Y T+ LI CKE + A R +M KG P
Sbjct: 373 VPPNYVTYTTLISIHCKEGDMVEARRLFREMAGKGAMP 410
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/107 (24%), Positives = 52/107 (48%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ FC+ G E + L D + + ++ ++ N+M+ YCR G +++ + V ++++
Sbjct: 278 LINGFCKIGQMEAAEMLLADMQGRGVGHNQIIFNTMIDGYCRQGMVDNALKVKAAMEKMG 337
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLI 107
I D T++ L C+ A + M KG P ++LI
Sbjct: 338 IELDVYTYNTLACGLCRVNRMAEAKTLLHIMIEKGVPPNYVTYTTLI 384
Score = 45.8 bits (107), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 24/95 (25%), Positives = 44/95 (46%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ + +G + + + + +AK DV L +++ AYCR G++ V +
Sbjct: 208 LVDSLSTAGDISKVEAVVDEMKAKNVAGDVYLYTAVINAYCRAGNVRRASEVFDECVGNG 267
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKG 95
I P+ T+ +LI FCK A + DM +G
Sbjct: 268 IEPNERTYGVLINGFCKIGQMEAAEMLLADMQGRG 302
>gi|449460167|ref|XP_004147817.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g19290-like [Cucumis sativus]
Length = 942
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/130 (24%), Positives = 67/130 (51%), Gaps = 8/130 (6%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I A+C +G ++ ++ K + V+ NS++ YC+ G + V+ + +
Sbjct: 367 LIHAYCTAGRVDDALRIRDAMLKVGLKMNTVICNSLINGYCKLGHVNKAAEVLVSMKDWN 426
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSL---IFHLGKMRAHS 117
+ PD ++ L+ FCK++ ++ A++ +MH KG ++L +FH+G H
Sbjct: 427 LKPDSYGYNTLLDGFCKQEDFIKAFKLCDEMHNKGVNFTVVTYNTLLKNLFHVG----HV 482
Query: 118 E-ALSVYNML 126
E AL ++N++
Sbjct: 483 EHALHIWNLM 492
Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 28/107 (26%), Positives = 48/107 (44%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ AF + G F+ + D +K + L N+M+C +C+ + + K+ EL
Sbjct: 507 LLDAFFKVGTFDRAMMIWKDALSKGFTKSITLYNTMICGFCKMEKLVQAQEIFLKMKELG 566
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLI 107
PD T+ LI +CK + A + R G E+ +SLI
Sbjct: 567 FPPDEITYRTLIDGYCKVGNLVEALKLKDMSERDGISSSTEMYNSLI 613
Score = 42.0 bits (97), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 22/77 (28%), Positives = 39/77 (50%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
M++A+C+ G +E + E + +VV NS++ Y GD+ V+ + E
Sbjct: 262 MVNAYCKEGRVDEAFNFVKEMERSCCEPNVVTYNSLIDGYVSLGDVCGAKKVLALMSEKG 321
Query: 61 ISPDYNTFHILIKYFCK 77
I + T+ +LIK +CK
Sbjct: 322 IPENSRTYTLLIKGYCK 338
Score = 40.4 bits (93), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 21/79 (26%), Positives = 39/79 (49%), Gaps = 6/79 (7%)
Query: 29 DVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYMLAYRTM 88
++V+ N+++ C++G+++ + KL +SP T++ LI +CK RT
Sbjct: 815 NIVVYNALINGLCKSGNLDRARRLFNKLARKGLSPTVVTYNTLIDGYCK------GGRTT 868
Query: 89 VDMHRKGHQPEEELCSSLI 107
+ K EE +C S I
Sbjct: 869 EALELKDKMREEGICPSSI 887
Score = 37.7 bits (86), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 19/72 (26%), Positives = 33/72 (45%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ C+SG + ++L K VV N+++ YC+ G + + K+ E
Sbjct: 822 LINGLCKSGNLDRARRLFNKLARKGLSPTVVTYNTLIDGYCKGGRTTEALELKDKMREEG 881
Query: 61 ISPDYNTFHILI 72
I P T+ LI
Sbjct: 882 ICPSSITYSTLI 893
Score = 36.6 bits (83), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 24/110 (21%), Positives = 48/110 (43%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I +C+ G E +L E + NS++ R+ +++ + ++ ++
Sbjct: 577 LIDGYCKVGNLVEALKLKDMSERDGISSSTEMYNSLITGVFRSEELQKLNGLLAEMKNRE 636
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHL 110
+SP+ T+ LI +C + M AY M KG P + S ++ L
Sbjct: 637 LSPNVVTYGSLIAGWCDKGMMDKAYNAYFKMIDKGIAPNIIIGSKIVSSL 686
Score = 35.0 bits (79), Expect = 10.0, Method: Compositional matrix adjust.
Identities = 26/123 (21%), Positives = 52/123 (42%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ FC+ F + +L + K + VV N++L G +E +H+ + +
Sbjct: 437 LLDGFCKQEDFIKAFKLCDEMHNKGVNFTVVTYNTLLKNLFHVGHVEHALHIWNLMHKRG 496
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
++P+ T+ L+ F K + A D KG L +++I KM +A
Sbjct: 497 VAPNEVTYCTLLDAFFKVGTFDRAMMIWKDALSKGFTKSITLYNTMICGFCKMEKLVQAQ 556
Query: 121 SVY 123
++
Sbjct: 557 EIF 559
>gi|414591138|tpg|DAA41709.1| TPA: hypothetical protein ZEAMMB73_028111 [Zea mays]
Length = 583
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/98 (25%), Positives = 46/98 (46%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
MI +CR G ++ ++ E + D+ N++ C CR ++ ++ + E+
Sbjct: 358 MIDGYCRKGMVDDALKIKAAMEKMGVELDIYTYNTLACGLCRVNRLDEAKTLLHIMIEMG 417
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQP 98
+ P+Y T+ LI CK+ + A R +M KG P
Sbjct: 418 VVPNYVTYTTLISIHCKDGDMVEARRLFREMAEKGATP 455
Score = 42.7 bits (99), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 33/67 (49%)
Query: 29 DVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYMLAYRTM 88
DV L +++ AYCR G+M V+ + + P+ T+ +LI FCK A +
Sbjct: 281 DVYLYTAVINAYCRAGNMRRAAKVLDECVGNGVEPNERTYGVLINGFCKIGQMEAAEMLL 340
Query: 89 VDMHRKG 95
DM +G
Sbjct: 341 ADMQGQG 347
Score = 37.7 bits (86), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 19/77 (24%), Positives = 39/77 (50%)
Query: 31 VLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYMLAYRTMVD 90
V +++ +C+ GDM + R++ E +P T++++I + K+ A R +
Sbjct: 423 VTYTTLISIHCKDGDMVEARRLFREMAEKGATPSVVTYNVMIDGYTKKGSIREAERFRKE 482
Query: 91 MHRKGHQPEEELCSSLI 107
M +KG P+ +SL+
Sbjct: 483 MEKKGFVPDVYTYASLV 499
>gi|357458533|ref|XP_003599547.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355488595|gb|AES69798.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 636
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/107 (28%), Positives = 52/107 (48%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I + C+ + +L AK DVV ++++ +C G +E + R++
Sbjct: 214 IIDSLCKHKLVIDAYELYSQMIAKKISPDVVTFSALIYGFCIVGQLEEAFGLFREMVLKN 273
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLI 107
I+PDY TF+IL+ CKE A +V M ++G P SSL+
Sbjct: 274 INPDYYTFNILVDALCKEGNLKGAKNMLVVMMKEGVMPNVVTYSSLM 320
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/107 (25%), Positives = 51/107 (47%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ A C+ G + K + + +VV +S++ YC + HV+ + ++
Sbjct: 284 LVDALCKEGNLKGAKNMLVVMMKEGVMPNVVTYSSLMDGYCLVNQVNKAKHVLNTISQMG 343
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLI 107
+P+ +++ +I FCK KM A DM KG P++ +SLI
Sbjct: 344 AAPNAHSYCTMINGFCKIKMVDEALSLFNDMQFKGIAPDKVTYNSLI 390
Score = 41.6 bits (96), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 23/96 (23%), Positives = 43/96 (44%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C+SG +L + ++ N ++ A C+ ++ + +++K+ +
Sbjct: 389 LIDGLCKSGRISYAWELVDEMHDNGQPANIFTYNCLIDALCKNHHVDQAIALVKKIKDQG 448
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGH 96
I PD TF+ILI CK A D+ KG+
Sbjct: 449 IQPDMYTFNILIYGLCKVGRLKNAQDVFQDLLSKGY 484
Score = 39.7 bits (91), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 29/123 (23%), Positives = 54/123 (43%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
MI+ FC+ +E L D + K D V NS++ C++G + ++ ++ +
Sbjct: 354 MINGFCKIKMVDEALSLFNDMQFKGIAPDKVTYNSLIDGLCKSGRISYAWELVDEMHDNG 413
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ T++ LI CK A + + +G QP+ + LI+ L K+ A
Sbjct: 414 QPANIFTYNCLIDALCKNHHVDQAIALVKKIKDQGIQPDMYTFNILIYGLCKVGRLKNAQ 473
Query: 121 SVY 123
V+
Sbjct: 474 DVF 476
Score = 36.2 bits (82), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 19/89 (21%), Positives = 42/89 (47%)
Query: 35 SMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRK 94
+++ C+ G+ + + ++RK+D + + ++ +I CK K+ + AY M K
Sbjct: 178 TLINGLCKIGETRTALQMLRKIDGKLVKINVVMYNTIIDSLCKHKLVIDAYELYSQMIAK 237
Query: 95 GHQPEEELCSSLIFHLGKMRAHSEALSVY 123
P+ S+LI+ + EA ++
Sbjct: 238 KISPDVVTFSALIYGFCIVGQLEEAFGLF 266
>gi|293330959|ref|NP_001169662.1| uncharacterized protein LOC100383543 [Zea mays]
gi|224030695|gb|ACN34423.1| unknown [Zea mays]
gi|414870691|tpg|DAA49248.1| TPA: hypothetical protein ZEAMMB73_502001 [Zea mays]
Length = 756
Score = 51.6 bits (122), Expect = 1e-04, Method: Composition-based stats.
Identities = 34/122 (27%), Positives = 54/122 (44%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ ++G +E K + + D N+++ A C +E + + R+L
Sbjct: 341 VINCLSKNGELDEAKGIVNQMVDRGCLPDTTTFNTLIVALCSQNRLEEALDLARELTVKG 400
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+SPD TF+ILI CK L R +M G P+E + LI HL M AL
Sbjct: 401 LSPDVYTFNILINALCKVGDPHLGIRLFEEMKSSGCAPDEVTYNILIDHLCSMGKLVNAL 460
Query: 121 SV 122
+
Sbjct: 461 DL 462
Score = 44.3 bits (103), Expect = 0.015, Method: Composition-based stats.
Identities = 36/154 (23%), Positives = 61/154 (39%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I A C EE LA + K DV N ++ A C+ GD + + ++
Sbjct: 376 LIVALCSQNRLEEALDLARELTVKGLSPDVYTFNILINALCKVGDPHLGIRLFEEMKSSG 435
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+PD T++ILI + C + A + +M G +++I L K EA
Sbjct: 436 CAPDEVTYNILIDHLCSMGKLVNALDLLKEMESNGCPRSTVTYNTIIDALCKQMRIEEAE 495
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLKDA 154
V++ + S ++ L K + DA
Sbjct: 496 EVFDQMDAHGISRSAVTFNTLIDGLCKAKRIDDA 529
Score = 44.3 bits (103), Expect = 0.017, Method: Composition-based stats.
Identities = 27/92 (29%), Positives = 44/92 (47%)
Query: 29 DVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYMLAYRTM 88
DVV LN+++ A CR + + + ++ ++ A++PD TF L++ F +E A R
Sbjct: 194 DVVTLNTLIKALCRAHQVRTAVLMLEEMSSHAVAPDETTFTTLMQGFIEEGSIEAALRVK 253
Query: 89 VDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
M G P + LI KM +AL
Sbjct: 254 TKMMETGCSPTRVTVNVLINGYCKMGRVEDAL 285
Score = 41.2 bits (95), Expect = 0.15, Method: Composition-based stats.
Identities = 26/123 (21%), Positives = 54/123 (43%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C++ ++ +L + + + NS+L YC+ GD++ ++ +
Sbjct: 516 LIDGLCKAKRIDDATELIEQMVKEGLQPSNITYNSILTHYCKQGDLKKAADILETMTANG 575
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
D T+ LI CK +A + + M KG +P + + +I L + +AL
Sbjct: 576 FEIDVVTYGTLINGLCKAGRTQVALKLLRGMRIKGIRPTPKAYNPVIQSLFRRNNLRDAL 635
Query: 121 SVY 123
S++
Sbjct: 636 SLF 638
Score = 39.3 bits (90), Expect = 0.53, Method: Composition-based stats.
Identities = 29/112 (25%), Positives = 46/112 (41%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C G L + E+ V N+++ A C+ +E V ++D
Sbjct: 446 LIDHLCSMGKLVNALDLLKEMESNGCPRSTVTYNTIIDALCKQMRIEEAEEVFDQMDAHG 505
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGK 112
IS TF+ LI CK K A + M ++G QP +S++ H K
Sbjct: 506 ISRSAVTFNTLIDGLCKAKRIDDATELIEQMVKEGLQPSNITYNSILTHYCK 557
Score = 38.1 bits (87), Expect = 1.1, Method: Composition-based stats.
Identities = 23/96 (23%), Positives = 44/96 (45%)
Query: 31 VLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYMLAYRTMVD 90
V +N ++ YC+ G +E + ++K PD T++ + C+ A + M
Sbjct: 266 VTVNVLINGYCKMGRVEDALGYIQKEIADGFEPDQVTYNTFVHCLCQNGHVSHALKVMDL 325
Query: 91 MHRKGHQPEEELCSSLIFHLGKMRAHSEALSVYNML 126
M ++GH P+ +++I L K EA + N +
Sbjct: 326 MLQEGHDPDVFTYNTVINCLSKNGELDEAKGIVNQM 361
>gi|242039913|ref|XP_002467351.1| hypothetical protein SORBIDRAFT_01g026260 [Sorghum bicolor]
gi|241921205|gb|EER94349.1| hypothetical protein SORBIDRAFT_01g026260 [Sorghum bicolor]
Length = 846
Score = 51.6 bits (122), Expect = 1e-04, Method: Composition-based stats.
Identities = 30/107 (28%), Positives = 48/107 (44%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I CR G E L D + D V N+++ AYCR DM S M+ M K+
Sbjct: 606 LIDGLCREGKLEMVDNLLLDMCSNGLTPDTVTYNTIINAYCRAKDMNSAMNFMNKMLAAG 665
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLI 107
PD T++I + C M A + + ++ G P+ ++L+
Sbjct: 666 CEPDIFTYNIWMHSLCSNHMLNQAGKVLDELVAMGCPPDSVTYNTLM 712
Score = 45.8 bits (107), Expect = 0.006, Method: Composition-based stats.
Identities = 28/125 (22%), Positives = 56/125 (44%)
Query: 2 ISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAI 61
I+ CR E Q + A+ + NS++ A CR G+M + + + + + +
Sbjct: 537 INGLCRLDYVNEAYQAFAEMTARGIVPNNFTYNSIISALCRAGNMTEALKLQQNMRQNGL 596
Query: 62 SPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEALS 121
PD T +ILI C+E + ++DM G P+ +++I + + + A++
Sbjct: 597 VPDIYTSNILIDGLCREGKLEMVDNLLLDMCSNGLTPDTVTYNTIINAYCRAKDMNSAMN 656
Query: 122 VYNML 126
N +
Sbjct: 657 FMNKM 661
Score = 38.1 bits (87), Expect = 1.1, Method: Composition-based stats.
Identities = 22/92 (23%), Positives = 42/92 (45%)
Query: 7 RSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYN 66
RSG + + A+ + + N+M+ +C G + ++ + E I P+
Sbjct: 196 RSGEVHAAWNVFEEMAARGPRPSLATFNAMILGFCHRGLVRVASGLLGIMGEFGIVPNVC 255
Query: 67 TFHILIKYFCKEKMYMLAYRTMVDMHRKGHQP 98
+++ILIK C A++ +MHR G +P
Sbjct: 256 SYNILIKGHCVFGWSRDAFKLFEEMHRSGCEP 287
>gi|255556157|ref|XP_002519113.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223541776|gb|EEF43324.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 486
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 73/154 (47%), Gaps = 4/154 (2%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+++ F G +E ++L + AK K DVV N+++ +C+ G++E + R+++
Sbjct: 280 LMTVFLDVGRTKEIEKLWEEMRAKGIKGDVVAYNTVIGGFCKIGEIEKAEELSREMELNG 339
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ + TF LI +C A M RKG + E + LI L + R SEAL
Sbjct: 340 VEANCVTFEHLINGYCSVGDVDSAILVFKHMVRKGFRAEGSVMDVLIGGLCEKRRVSEAL 399
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLKDA 154
+ +R + R+ L K +LI G L KD
Sbjct: 400 EI---MRIAMRNDGFRLSGKSYELLIKG-LCKDG 429
>gi|225456753|ref|XP_002268934.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g74580 [Vitis vinifera]
gi|297733985|emb|CBI15232.3| unnamed protein product [Vitis vinifera]
Length = 764
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/123 (27%), Positives = 56/123 (45%), Gaps = 1/123 (0%)
Query: 2 ISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAI 61
I FC+ E +L D + DV+ N+++C C+ + H +RK+
Sbjct: 258 IQGFCQRAMLNEAIRLL-DGVGRGLTPDVITYNTLICGLCKNFKVVEAEHYLRKMVNEGY 316
Query: 62 SPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEALS 121
PD T++ +I +CK M A + + D KG P+E SLI L + A++
Sbjct: 317 EPDGFTYNSIIDGYCKLGMMQNADQILRDGAFKGFVPDESTYCSLINGLCQDGDIDRAIN 376
Query: 122 VYN 124
V+N
Sbjct: 377 VFN 379
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 31/122 (25%), Positives = 55/122 (45%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ C+ GC + L D AK DV N+++ YC+ +++ + ++ ++
Sbjct: 431 VINGLCKIGCVSDADNLVIDAIAKGHLPDVFTFNTLIDGYCKKLKLDNAIEIVDRMWNHG 490
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+SPD T++ ++ CK Y T M KG P + L K R EAL
Sbjct: 491 VSPDVITYNSILNGLCKAGKYEDVMGTFKLMMEKGCVPNIITYNILTESFCKARKVEEAL 550
Query: 121 SV 122
++
Sbjct: 551 NL 552
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 36/71 (50%)
Query: 29 DVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYMLAYRTM 88
DV+ NS+L C+ G E VM + + E P+ T++IL + FCK + A +
Sbjct: 494 DVITYNSILNGLCKAGKYEDVMGTFKLMMEKGCVPNIITYNILTESFCKARKVEEALNLI 553
Query: 89 VDMHRKGHQPE 99
+M KG P+
Sbjct: 554 EEMQNKGLTPD 564
Score = 43.9 bits (102), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 26/107 (24%), Positives = 52/107 (48%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ C+ G + + + K K ++VL N+++ + G + + +M ++ E
Sbjct: 361 LINGLCQDGDIDRAINVFNEAMEKGLKPNLVLCNTLVKGLSQQGLILQALKLMNEMSENG 420
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLI 107
SPD T++++I CK A ++D KGH P+ ++LI
Sbjct: 421 CSPDIWTYNLVINGLCKIGCVSDADNLVIDAIAKGHLPDVFTFNTLI 467
Score = 40.8 bits (94), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 25/96 (26%), Positives = 44/96 (45%)
Query: 29 DVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYMLAYRTM 88
D NS++ YC+ G M++ ++R PD +T+ LI C++ A
Sbjct: 319 DGFTYNSIIDGYCKLGMMQNADQILRDGAFKGFVPDESTYCSLINGLCQDGDIDRAINVF 378
Query: 89 VDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVYN 124
+ KG +P LC++L+ L + +AL + N
Sbjct: 379 NEAMEKGLKPNLVLCNTLVKGLSQQGLILQALKLMN 414
Score = 40.0 bits (92), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 23/100 (23%), Positives = 46/100 (46%), Gaps = 1/100 (1%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDE-L 59
+ +FC++ EE L + + K DVV +++ +C GD++ + +++DE
Sbjct: 536 LTESFCKARKVEEALNLIEEMQNKGLTPDVVNFGTLMKGFCDNGDLDGAYQLFKRVDEQY 595
Query: 60 AISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPE 99
S T++I+I F + +A + M G P+
Sbjct: 596 KFSHTIATYNIMINAFAGKLNMNMAEKLFNKMCENGFSPD 635
Score = 39.3 bits (90), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 26/119 (21%), Positives = 54/119 (45%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I +C+ G + Q+ D K D S++ C+ GD++ ++V + E
Sbjct: 326 IIDGYCKLGMMQNADQILRDGAFKGFVPDESTYCSLINGLCQDGDIDRAINVFNEAMEKG 385
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEA 119
+ P+ + L+K ++ + + A + M +M G P+ + +I L K+ S+A
Sbjct: 386 LKPNLVLCNTLVKGLSQQGLILQALKLMNEMSENGCSPDIWTYNLVINGLCKIGCVSDA 444
Score = 38.9 bits (89), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 21/79 (26%), Positives = 42/79 (53%), Gaps = 1/79 (1%)
Query: 29 DVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYMLAYRTM 88
D++ N ++ CR G ++ ++ K+ + +SP+ T +I I+ FC+ M A R +
Sbjct: 215 DIMAFNKLIHTLCRKGHVQESERLLNKVLKRGVSPNLFTVNIFIQGFCQRAMLNEAIR-L 273
Query: 89 VDMHRKGHQPEEELCSSLI 107
+D +G P+ ++LI
Sbjct: 274 LDGVGRGLTPDVITYNTLI 292
Score = 36.2 bits (82), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 24/99 (24%), Positives = 42/99 (42%), Gaps = 1/99 (1%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYD-KYDVVLLNSMLCAYCRTGDMESVMHVMRKLDEL 59
++ FC +G + QL + +Y + + N M+ A+ +M + K+ E
Sbjct: 571 LMKGFCDNGDLDGAYQLFKRVDEQYKFSHTIATYNIMINAFAGKLNMNMAEKLFNKMCEN 630
Query: 60 AISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQP 98
SPD T+ ++I FCK Y ++ KG P
Sbjct: 631 GFSPDSYTYRVMIDGFCKTGNINSGYSFLLVKIEKGLIP 669
Score = 35.4 bits (80), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 18/89 (20%), Positives = 46/89 (51%), Gaps = 6/89 (6%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDK---YDVVLLNSMLCAYCRTGDMESVMHVMRKLD 57
+++ C++G +E+ + G F+ +K +++ N + ++C+ +E ++++ ++
Sbjct: 501 ILNGLCKAGKYED---VMGTFKLMMEKGCVPNIITYNILTESFCKARKVEEALNLIEEMQ 557
Query: 58 ELAISPDYNTFHILIKYFCKEKMYMLAYR 86
++PD F L+K FC AY+
Sbjct: 558 NKGLTPDVVNFGTLMKGFCDNGDLDGAYQ 586
>gi|224092436|ref|XP_002309609.1| predicted protein [Populus trichocarpa]
gi|222855585|gb|EEE93132.1| predicted protein [Populus trichocarpa]
Length = 841
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/118 (25%), Positives = 58/118 (49%)
Query: 7 RSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYN 66
+ G E ++ G+ + +VV+ +++ YC+ GD++S + + K++E I P+
Sbjct: 306 KQGKMLEAVKVKGEMLSCGKPMNVVVATTLMKGYCKQGDLDSALELFDKMNENGICPNNV 365
Query: 67 TFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVYN 124
T+ ++I++ CK AY M K P +SLI K R+ EA +++
Sbjct: 366 TYAVIIEWCCKNGNMDKAYEIYNQMKNKDISPTVFNVNSLIRGYLKARSPEEASKLFD 423
Score = 42.0 bits (97), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 29/119 (24%), Positives = 54/119 (45%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++S C+ G E + K + VV N+M+ +C+ GDM+S V ++ E
Sbjct: 439 LLSWLCKEGKMSEACSIWEKMVRKGVRPSVVSYNNMILGHCQQGDMDSANGVFVEMLEKG 498
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEA 119
+ P+ T+ +L+ + K+ A+ M + P + C+ +I L K SE+
Sbjct: 499 LKPNLITYSVLMDGYFKKGDTEYAFGLYDRMRGENIAPSDFTCNIIINGLCKAGRTSES 557
Score = 40.8 bits (94), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 24/99 (24%), Positives = 44/99 (44%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I FCR G QL + + + V+ +SM+ + + +ME+ +H+ +++
Sbjct: 649 LIDGFCRKGDMVNASQLLSELQEVGLSPNKVVYSSMISGFRKLQNMEAALHLHKRMINEG 708
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPE 99
I D + LI KE + A +M KG P+
Sbjct: 709 IPCDLQIYTTLISGLLKEGKLLFASELYAEMLAKGIMPD 747
Score = 40.8 bits (94), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 19/77 (24%), Positives = 42/77 (54%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ FC+S + ++ + + K + DV + +++ +CR GDM + ++ +L E+
Sbjct: 614 LINGFCKSNNMDLALKVMDEMKNKGIELDVTVYCALIDGFCRKGDMVNASQLLSELQEVG 673
Query: 61 ISPDYNTFHILIKYFCK 77
+SP+ + +I F K
Sbjct: 674 LSPNKVVYSSMISGFRK 690
Score = 38.5 bits (88), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 22/95 (23%), Positives = 45/95 (47%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ C++G E++ + + N ++ + + G + S + V ++ ++
Sbjct: 544 IINGLCKAGRTSESQDRLKKLVQEGFIPTCMTYNCIIDGFVKEGSVNSALAVYTEMCKIG 603
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKG 95
+SP+ T+ LI FCK LA + M +M KG
Sbjct: 604 VSPNVFTYTNLINGFCKSNNMDLALKVMDEMKNKG 638
Score = 37.4 bits (85), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 30/131 (22%), Positives = 64/131 (48%), Gaps = 9/131 (6%)
Query: 29 DVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYMLAYRTM 88
+V +++ +C++ +M+ + VM ++ I D + LI FC++ + A + +
Sbjct: 607 NVFTYTNLINGFCKSNNMDLALKVMDEMKNKGIELDVTVYCALIDGFCRKGDMVNASQLL 666
Query: 89 VDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVYNMLRYSKRSMCKAL--HEKILHILI 146
++ G P + + SS+I K++ AL ++ KR + + + +I LI
Sbjct: 667 SELQEVGLSPNKVVYSSMISGFRKLQNMEAALHLH------KRMINEGIPCDLQIYTTLI 720
Query: 147 SGKLLKDAYIV 157
SG LLK+ ++
Sbjct: 721 SG-LLKEGKLL 730
>gi|357475985|ref|XP_003608278.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|124359684|gb|ABD32353.2| Tetratricopeptide-like helical [Medicago truncatula]
gi|355509333|gb|AES90475.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 870
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 53/99 (53%), Gaps = 5/99 (5%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLD--- 57
++S+FC+ +E ++L K DVV NS + A CR G + + R +
Sbjct: 225 LVSSFCKQDMNDEAEKLVERMTEKGLLPDVVTFNSRISALCRAGKVFEASRIFRDMQMDG 284
Query: 58 ELAIS-PDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKG 95
EL + P+ TF++++K FC+E M M R++V+ +KG
Sbjct: 285 ELGLPKPNVVTFNLMLKGFCQEGM-MEEARSLVETMKKG 322
Score = 41.2 bits (95), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 35/59 (59%), Gaps = 5/59 (8%)
Query: 29 DVVLLNSM---LCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYMLA 84
D+ N+M LC +T D S++H M LD+ +SP+ ++F ILIK FCK + +A
Sbjct: 629 DICTYNNMINCLCEGGKTKDATSLLHEM--LDKGVVSPNVSSFKILIKAFCKSGDFKVA 685
Score = 40.8 bits (94), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 25/107 (23%), Positives = 48/107 (44%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
M+ FC+ G EE + L + + + N+ L R G + V+ ++ E
Sbjct: 299 MLKGFCQEGMMEEARSLVETMKKGGNFVSLESYNTWLLGLLRNGKLLEGRSVLDEMVENG 358
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLI 107
I P+ +++I++ C+ M + A R M M G P+ ++L+
Sbjct: 359 IEPNIYSYNIVMDGLCRNHMMLDARRLMDLMVSNGVYPDTVTYTTLL 405
Score = 40.0 bits (92), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 22/83 (26%), Positives = 37/83 (44%)
Query: 29 DVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYMLAYRTM 88
DV+ +++ C+ G +E ++ + PD T+ + FCK+ A R +
Sbjct: 524 DVITYTTLINGLCKVGKLEEAKKKFIEMMAKNLHPDSVTYDTFVLNFCKQGKISSALRVL 583
Query: 89 VDMHRKGHQPEEELCSSLIFHLG 111
DM R G + +SLI LG
Sbjct: 584 KDMERNGCSKTLQTYNSLILGLG 606
Score = 40.0 bits (92), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 23/99 (23%), Positives = 45/99 (45%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ C+ G EE K+ + AK D V ++ + +C+ G + S + V++ ++
Sbjct: 531 LINGLCKVGKLEEAKKKFIEMMAKNLHPDSVTYDTFVLNFCKQGKISSALRVLKDMERNG 590
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPE 99
S T++ LI + Y M +M +G P+
Sbjct: 591 CSKTLQTYNSLILGLGSKGQIFEMYGLMDEMRERGIHPD 629
Score = 37.7 bits (86), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 23/96 (23%), Positives = 43/96 (44%), Gaps = 4/96 (4%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYD-KYDVVLLNSMLCAYCRTGDMESVMHVMRKLDEL 59
++ FCR+G TKQ + K + V+ N+++ ++C+ + ++ ++ E
Sbjct: 192 LVRGFCRAG---RTKQALEFVDGKMGGNVNRVVYNTLVSSFCKQDMNDEAEKLVERMTEK 248
Query: 60 AISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKG 95
+ PD TF+ I C+ A R DM G
Sbjct: 249 GLLPDVVTFNSRISALCRAGKVFEASRIFRDMQMDG 284
>gi|343887304|dbj|BAK61850.1| PPR containing protein [Citrus unshiu]
Length = 567
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 58/111 (52%), Gaps = 4/111 (3%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVM-RKLDEL 59
MI +C+ G E K++ F+ K +++ N+M+ +C+ GDMES V R +
Sbjct: 200 MIRGYCKMGMIENAKKV---FDVMTVKPNLLAYNTMINGFCKKGDMESARLVFDRMMSGE 256
Query: 60 AISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHL 110
P++ T+ LI +CK+ A + M +M +G +P E +++I+ L
Sbjct: 257 DCLPNHVTYTTLIDGYCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGL 307
Score = 42.0 bits (97), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 26/98 (26%), Positives = 43/98 (43%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
MI C +G +E K L K +V SML C G + + +R + E
Sbjct: 303 MIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEAN 362
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQP 98
++PD ++ ++I FCK A + +M +G +P
Sbjct: 363 MNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKP 400
Score = 38.1 bits (87), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 22/98 (22%), Positives = 48/98 (48%), Gaps = 1/98 (1%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ FC+ G +E L + A+ K V N++ G+++ + +++++ ++
Sbjct: 373 VINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMD 432
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVD-MHRKGHQ 97
P++ +++ +I C K M +VD M R GH
Sbjct: 433 CLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHN 470
>gi|296087509|emb|CBI34098.3| unnamed protein product [Vitis vinifera]
Length = 718
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/107 (24%), Positives = 54/107 (50%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+IS FC+ G E+ +L + K ++ + N+++ C++GD++ + + E
Sbjct: 366 LISGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLFDGMPEKG 425
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLI 107
+ PD T+ +I +CK + A+ +M KG QP + ++L+
Sbjct: 426 LEPDSVTYSTMIDGYCKSENVAEAFSLFHEMPSKGVQPHSFVYNALV 472
Score = 44.7 bits (104), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 31/127 (24%), Positives = 54/127 (42%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+IS ++G EE + + + K D V + + Y +TG M ++ +
Sbjct: 226 IISCLSKAGKMEEASTYLLEIQGRGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHG 285
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ P+ + +LI K M A +H G P+ + CS+ I L K EAL
Sbjct: 286 LMPNNPLYTVLINGHFKAGNLMEALSIFRHLHALGVLPDVQTCSAFIHGLLKNGRVQEAL 345
Query: 121 SVYNMLR 127
V++ L+
Sbjct: 346 KVFSELK 352
Score = 40.8 bits (94), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 26/122 (21%), Positives = 56/122 (45%)
Query: 2 ISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAI 61
I ++G +E ++ + + K DV +S++ +C+ G++E + ++ I
Sbjct: 332 IHGLLKNGRVQEALKVFSELKEKGLVPDVFTYSSLISGFCKQGEVEKAFELHDEMCLKGI 391
Query: 62 SPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEALS 121
+P+ ++ L+ CK A + M KG +P+ S++I K +EA S
Sbjct: 392 APNIFIYNALVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYSTMIDGYCKSENVAEAFS 451
Query: 122 VY 123
++
Sbjct: 452 LF 453
Score = 39.7 bits (91), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 28/126 (22%), Positives = 56/126 (44%), Gaps = 4/126 (3%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I F R G +E ++ + +++ N ++ C+ G ME +++ + L
Sbjct: 51 LIDGFMREGDIDEVLRIKDVMVSCGIPINLITYNVLIHGLCKFGKMEKAAEILKGMITLG 110
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
P+ TF +LI+ +C+E A + +M ++ P ++I L H + L
Sbjct: 111 CKPNSRTFCLLIEGYCREHNMGRALELLDEMEKRNLVPSAVSYGAMINGL----CHCKDL 166
Query: 121 SVYNML 126
S+ N L
Sbjct: 167 SLANKL 172
>gi|255563546|ref|XP_002522775.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223538013|gb|EEF39626.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 1071
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/112 (25%), Positives = 55/112 (49%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
MI CR+G E+ +L DVV + ++ +CR G +++V ++ K+ +
Sbjct: 384 MIDGLCRNGLLNESVKLLDKMLKDGVVPDVVTFSVLINGFCRVGKIKNVKEIICKMYKAG 443
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGK 112
++P+ + LI +CK + A++ V M R G+ +C+ L+ L K
Sbjct: 444 LAPNSIIYTTLIYNYCKTGDVVEAFKVYVAMSRIGYDANCFICNVLVSSLCK 495
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 28/123 (22%), Positives = 53/123 (43%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+++ CR FE +K + + +M+ CR G + + ++ K+ +
Sbjct: 349 LLNGLCRHAKFELSKSILERMRMNGMIVGCIAYTAMIDGLCRNGLLNESVKLLDKMLKDG 408
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ PD TF +LI FC+ + M++ G P + ++LI++ K EA
Sbjct: 409 VVPDVVTFSVLINGFCRVGKIKNVKEIICKMYKAGLAPNSIIYTTLIYNYCKTGDVVEAF 468
Query: 121 SVY 123
VY
Sbjct: 469 KVY 471
Score = 39.3 bits (90), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 29/130 (22%), Positives = 55/130 (42%), Gaps = 3/130 (2%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ C G ++ L E VV N++L YC+ G ++ + ++ ++
Sbjct: 174 LINVLCVEGKLKKAGYLLKKMEESGYVPSVVTYNTVLNWYCKKGRYKAALELIDQMGSKG 233
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHL---GKMRAHS 117
I D T+++L+ CK Y + M ++ P E +S+I GK+ A +
Sbjct: 234 IEADACTYNMLVDDLCKNNRSAKGYLLLKKMRKRMISPNEITYNSIINGFVKEGKIGAAT 293
Query: 118 EALSVYNMLR 127
+ML
Sbjct: 294 RIFQEMSMLN 303
Score = 36.6 bits (83), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 30/138 (21%), Positives = 59/138 (42%), Gaps = 3/138 (2%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ A CR+G F+E K+L D V N++L ++G + + + ++ +
Sbjct: 559 LLKALCRAGKFKEAKRLLDKLHYIPSAVDTVTYNTILVETFKSGMLTDAVALFDEMVQRN 618
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGH-QPEEELCSSLIFHLGKMRAHSEA 119
+ PD T+ I+ + + A ++ KG PE+ + ++ F G RA
Sbjct: 619 VLPDSYTYAIIFAGLIRRGKMVAALHFYGNLLGKGAVSPEKVMYTT--FVDGLFRAGQSK 676
Query: 120 LSVYNMLRYSKRSMCKAL 137
++Y K +C L
Sbjct: 677 AALYFCEDMEKNGLCADL 694
Score = 36.2 bits (82), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 18/68 (26%), Positives = 34/68 (50%)
Query: 5 FCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPD 64
FCR+ E +L + K DV+ N ++ C GD+ S + + +++ + + P+
Sbjct: 950 FCRNESLVEALKLKDTMDFCDVKLDVIAYNVLISGLCADGDVASALKLYKEIKQRGLWPN 1009
Query: 65 YNTFHILI 72
T+ ILI
Sbjct: 1010 MTTYCILI 1017
Score = 35.0 bits (79), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 27/126 (21%), Positives = 53/126 (42%), Gaps = 4/126 (3%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ FCR G + K++ + ++ +++ YC+TGD+ V +
Sbjct: 419 LINGFCRVGKIKNVKEIICKMYKAGLAPNSIIYTTLIYNYCKTGDVVEAFKVYVAMSR-- 476
Query: 61 ISPDYNTF--HILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSE 118
I D N F ++L+ CK+ +A M + G+ P +I G +
Sbjct: 477 IGYDANCFICNVLVSSLCKDGKVGVAEYFFHHMSKIGNVPNSITFDCIINGYGNSGNGLK 536
Query: 119 ALSVYN 124
A S+++
Sbjct: 537 AFSMFD 542
>gi|302142431|emb|CBI19634.3| unnamed protein product [Vitis vinifera]
Length = 839
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/126 (20%), Positives = 67/126 (53%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I +CR+G ++ +L + K ++ + NS++ YC+ G++ V+ ++ +
Sbjct: 304 LIDGYCRTGKIDDAVRLLDEMLRLGLKTNLFICNSLINGYCKRGEIHEAEGVITRMVDWN 363
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ PD +++ L+ +C+E A+ M ++G +P ++L+ L ++ A +AL
Sbjct: 364 LKPDSYSYNTLLDGYCREGHTSEAFNLCDKMLQEGIEPTVLTYNTLLKGLCRVGAFDDAL 423
Query: 121 SVYNML 126
+++++
Sbjct: 424 QIWHLM 429
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 46/104 (44%)
Query: 11 FEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHI 70
FE L D A+ + N+M+ C+ G M + K+ +L SPD T+
Sbjct: 454 FEGASTLWKDILARGFTKSRITFNTMISGLCKMGKMVEAEEIFDKMKDLGCSPDGITYRT 513
Query: 71 LIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMR 114
LI +CK A++ M R+ P E+ +SLI L K R
Sbjct: 514 LIDGYCKASNVGQAFKVKGAMEREPISPSIEMYNSLISGLFKSR 557
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 32/126 (25%), Positives = 59/126 (46%), Gaps = 6/126 (4%)
Query: 1 MISAFCRSGCFEETKQLAG---DFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLD 57
+I+ +C+ G E + + D+ K D Y N++L YCR G ++ K+
Sbjct: 339 LINGYCKRGEIHEAEGVITRMVDWNLKPDSYS---YNTLLDGYCREGHTSEAFNLCDKML 395
Query: 58 ELAISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHS 117
+ I P T++ L+K C+ + A + M ++G P+E S+L+ L KM
Sbjct: 396 QEGIEPTVLTYNTLLKGLCRVGAFDDALQIWHLMMKRGVAPDEVGYSTLLDGLFKMENFE 455
Query: 118 EALSVY 123
A +++
Sbjct: 456 GASTLW 461
Score = 45.8 bits (107), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 43/78 (55%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
M++AFC+ G +E E + ++V +S++ Y GD+E+ V++ + E
Sbjct: 198 MVNAFCKDGKVDEAAGFVKKMENLGVEPNIVTYHSLINGYVSLGDVEAAKGVLKFMSEKG 257
Query: 61 ISPDYNTFHILIKYFCKE 78
+S + T+ +LIK +CK+
Sbjct: 258 VSRNVVTYTLLIKGYCKQ 275
Score = 40.8 bits (94), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 23/119 (19%), Positives = 56/119 (47%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I +C++ + ++ G E + + + NS++ ++ + V ++ ++
Sbjct: 514 LIDGYCKASNVGQAFKVKGAMEREPISPSIEMYNSLISGLFKSRRLVEVTDLLTEMGIRG 573
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEA 119
++P+ T+ LI +CKE M A+ + +M G +CS+++ L ++ EA
Sbjct: 574 LTPNIVTYGALIDGWCKEGMLDKAFSSYFEMTENGLSANIIICSTMVSGLYRLGRIDEA 632
Score = 40.0 bits (92), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 28/108 (25%), Positives = 50/108 (46%), Gaps = 1/108 (0%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKL-DEL 59
+I+ + G E K + K +VV ++ YC+ M+ V+R + +E
Sbjct: 233 LINGYVSLGDVEAAKGVLKFMSEKGVSRNVVTYTLLIKGYCKQCKMDEAEKVLRGMQEEA 292
Query: 60 AISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLI 107
A+ PD + +LI +C+ A R + +M R G + +C+SLI
Sbjct: 293 ALVPDERAYGVLIDGYCRTGKIDDAVRLLDEMLRLGLKTNLFICNSLI 340
Score = 35.8 bits (81), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 13/47 (27%), Positives = 29/47 (61%)
Query: 29 DVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYF 75
DV +++ M+ A+C+ G ++ ++K++ L + P+ T+H LI +
Sbjct: 191 DVFMVSIMVNAFCKDGKVDEAAGFVKKMENLGVEPNIVTYHSLINGY 237
>gi|357449339|ref|XP_003594946.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|124359380|gb|ABN05846.1| Tetratricopeptide-like helical [Medicago truncatula]
gi|355483994|gb|AES65197.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 849
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/98 (27%), Positives = 49/98 (50%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
M+S F R+ E+ ++ + ++V NS++ Y R GD +++ +
Sbjct: 664 MLSMFVRNQKLEKAHEMLDVIHVSGLQPNLVTYNSLIDLYARVGDCWKAEEMLKDIQNSG 723
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQP 98
ISPD +++ +IK FCK+ + A R + +M G QP
Sbjct: 724 ISPDVVSYNTVIKGFCKKGLVQEAIRILSEMTANGVQP 761
Score = 44.3 bits (103), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 27/127 (21%), Positives = 57/127 (44%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+ISA R G +E ++ D + K NSML + + G +++++++++
Sbjct: 314 VISACGREGILDEARRFFDDLKLNGYKPGTATYNSMLQVFGKAGVYTEALNILKEMEDNN 373
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
PD T++ L+ + + + + M KG P +++I GK +AL
Sbjct: 374 CEPDAITYNELVAAYVRAGFHDEGAAVIDTMASKGVMPNAITYTTVINAYGKAGDADKAL 433
Query: 121 SVYNMLR 127
V+ ++
Sbjct: 434 EVFGQMK 440
Score = 43.5 bits (101), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 27/132 (20%), Positives = 62/132 (46%), Gaps = 1/132 (0%)
Query: 29 DVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCK-EKMYMLAYRT 87
DV ++L AY RTG + + + K+ E + P T+++++ + K + + +
Sbjct: 236 DVKACTTVLHAYARTGKYKRAIEIFEKMKETGLDPTLVTYNVMLDVYGKMGRAWSMILEL 295
Query: 88 MVDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVYNMLRYSKRSMCKALHEKILHILIS 147
+ +M KG + +E C+++I G+ EA ++ L+ + A + +L +
Sbjct: 296 LDEMRSKGLEFDEFTCTTVISACGREGILDEARRFFDDLKLNGYKPGTATYNSMLQVFGK 355
Query: 148 GKLLKDAYIVVK 159
+ +A ++K
Sbjct: 356 AGVYTEALNILK 367
>gi|449477018|ref|XP_004154904.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g19290-like [Cucumis sativus]
Length = 567
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/130 (24%), Positives = 67/130 (51%), Gaps = 8/130 (6%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I A+C +G ++ ++ K + V+ NS++ YC+ G + V+ + +
Sbjct: 367 LIHAYCTAGRVDDALRIRDAMLKVGLKMNTVICNSLINGYCKLGHVNKAAEVLVSMKDWN 426
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSL---IFHLGKMRAHS 117
+ PD ++ L+ FCK++ ++ A++ +MH KG ++L +FH+G H
Sbjct: 427 LKPDSYGYNTLLDGFCKQEDFIKAFKLCDEMHNKGVNFTVVTYNTLLKNLFHVG----HV 482
Query: 118 E-ALSVYNML 126
E AL ++N++
Sbjct: 483 EHALHIWNLM 492
Score = 42.4 bits (98), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 49/104 (47%), Gaps = 9/104 (8%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
M++A+C+ G +E + E + +VV NS++ Y GD+ V+ + E
Sbjct: 262 MVNAYCKEGRVDEAFNFVKEMERSCCEPNVVTYNSLIDGYVSLGDVCGAKKVLALMSEKG 321
Query: 61 ISPDYNTFHILIKYFCK-------EKMY--MLAYRTMVDMHRKG 95
I + T+ +LIK +CK EK++ M+ VD H G
Sbjct: 322 IPENSRTYTLLIKGYCKRGQMEQAEKLFGCMMEKNLFVDEHVYG 365
Score = 35.4 bits (80), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 26/123 (21%), Positives = 52/123 (42%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ FC+ F + +L + K + VV N++L G +E +H+ + +
Sbjct: 437 LLDGFCKQEDFIKAFKLCDEMHNKGVNFTVVTYNTLLKNLFHVGHVEHALHIWNLMHKRG 496
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
++P+ T+ L+ F K + A D KG L +++I KM +A
Sbjct: 497 VAPNEVTYCTLLDAFFKVGTFDRAMMIWKDALSKGFTKSITLYNTMICGFCKMEKLVQAQ 556
Query: 121 SVY 123
++
Sbjct: 557 EIF 559
>gi|359475765|ref|XP_002273555.2| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
mitochondrial-like [Vitis vinifera]
Length = 935
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/107 (24%), Positives = 54/107 (50%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+IS FC+ G E+ +L + K ++ + N+++ C++GD++ + + E
Sbjct: 565 LISGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLFDGMPEKG 624
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLI 107
+ PD T+ +I +CK + A+ +M KG QP + ++L+
Sbjct: 625 LEPDSVTYSTMIDGYCKSENVAEAFSLFHEMPSKGVQPHSFVYNALV 671
Score = 44.3 bits (103), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 31/127 (24%), Positives = 54/127 (42%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+IS ++G EE + + + K D V + + Y +TG M ++ +
Sbjct: 425 IISCLSKAGKMEEASTYLLEIQGRGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHG 484
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ P+ + +LI K M A +H G P+ + CS+ I L K EAL
Sbjct: 485 LMPNNPLYTVLINGHFKAGNLMEALSIFRHLHALGVLPDVQTCSAFIHGLLKNGRVQEAL 544
Query: 121 SVYNMLR 127
V++ L+
Sbjct: 545 KVFSELK 551
Score = 40.4 bits (93), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 26/122 (21%), Positives = 56/122 (45%)
Query: 2 ISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAI 61
I ++G +E ++ + + K DV +S++ +C+ G++E + ++ I
Sbjct: 531 IHGLLKNGRVQEALKVFSELKEKGLVPDVFTYSSLISGFCKQGEVEKAFELHDEMCLKGI 590
Query: 62 SPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEALS 121
+P+ ++ L+ CK A + M KG +P+ S++I K +EA S
Sbjct: 591 APNIFIYNALVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYSTMIDGYCKSENVAEAFS 650
Query: 122 VY 123
++
Sbjct: 651 LF 652
Score = 38.9 bits (89), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 28/126 (22%), Positives = 56/126 (44%), Gaps = 4/126 (3%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I F R G +E ++ + +++ N ++ C+ G ME +++ + L
Sbjct: 250 LIDGFMREGDIDEVLRIKDVMVSCGIPINLITYNVLIHGLCKFGKMEKAAEILKGMITLG 309
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
P+ TF +LI+ +C+E A + +M ++ P ++I L H + L
Sbjct: 310 CKPNSRTFCLLIEGYCREHNMGRALELLDEMEKRNLVPSAVSYGAMINGL----CHCKDL 365
Query: 121 SVYNML 126
S+ N L
Sbjct: 366 SLANKL 371
Score = 37.4 bits (85), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 29/119 (24%), Positives = 52/119 (43%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C++G EE L + + + D V S++ Y + G V + K+
Sbjct: 739 VIDWHCKAGKMEEANLLFKEMQERNLIVDTVTYTSLMYGYNKLGQSSEVFALFEKMVAKG 798
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEA 119
+ PD T+ ++I CKE + A++ ++ KG + + LI L K +EA
Sbjct: 799 VKPDEVTYGLVIYAHCKEDNLVEAFKLRDEVVGKGMLTKGTIHDLLITALCKREDLTEA 857
>gi|147780655|emb|CAN66818.1| hypothetical protein VITISV_004776 [Vitis vinifera]
Length = 1037
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/126 (20%), Positives = 67/126 (53%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I +CR+G ++ +L + K ++ + NS++ YC+ G++ V+ ++ +
Sbjct: 338 LIDGYCRTGKIDDAVRLLDEMLRLGLKTNLFICNSLINGYCKRGEIHEAEGVITRMVDWN 397
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ PD +++ L+ +C+E A+ M ++G +P ++L+ L ++ A +AL
Sbjct: 398 LKPDSYSYNTLLDGYCREGHTSEAFNLCDKMLQEGIEPTVLTYNTLLKGLCRVGAFDDAL 457
Query: 121 SVYNML 126
+++++
Sbjct: 458 QIWHLM 463
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 46/104 (44%)
Query: 11 FEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHI 70
FE L D A+ + N+M+ C+ G M + K+ +L SPD T+
Sbjct: 488 FEGASTLWKDILARGFTKSRITFNTMISGLCKMGKMVEAEEIFDKMKDLGCSPDGITYRT 547
Query: 71 LIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMR 114
LI +CK A++ M R+ P E+ +SLI L K R
Sbjct: 548 LIDGYCKASNVGQAFKVKGAMEREXISPSIEMYNSLISGLFKSR 591
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 43/78 (55%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
M++AFC+ G +E E + ++V +S++ Y GD+E+ V++ + E
Sbjct: 232 MVNAFCKDGKVDEAAGFVKKMENLGVEPNIVTYHSLINGYVSLGDVEAAKGVLKFMSEKG 291
Query: 61 ISPDYNTFHILIKYFCKE 78
+S + T+ +LIK +CK+
Sbjct: 292 VSRNVVTYTLLIKGYCKQ 309
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 32/126 (25%), Positives = 58/126 (46%), Gaps = 6/126 (4%)
Query: 1 MISAFCRSGCFEETKQLAG---DFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLD 57
+I+ +C+ G E + + D+ K D Y N++L YCR G ++ K+
Sbjct: 373 LINGYCKRGEIHEAEGVITRMVDWNLKPDSYS---YNTLLDGYCREGHTSEAFNLCDKML 429
Query: 58 ELAISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHS 117
+ I P T++ L+K C+ + A + M + G P+E S+L+ L KM
Sbjct: 430 QEGIEPTVLTYNTLLKGLCRVGAFDDALQIWHLMMKXGVAPDEVGYSTLLDGLFKMENFE 489
Query: 118 EALSVY 123
A +++
Sbjct: 490 GASTLW 495
Score = 42.4 bits (98), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 22/77 (28%), Positives = 39/77 (50%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ C+S + ++L K +VV N+++ YC+ G+M++ + K+ E
Sbjct: 790 LINGLCKSENVDRAQRLFHKLHQKGLFPNVVTYNTLIDGYCKIGNMDAAFKLKDKMIEEG 849
Query: 61 ISPDYNTFHILIKYFCK 77
ISP T+ LI CK
Sbjct: 850 ISPSVVTYSALINGLCK 866
Score = 39.7 bits (91), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 28/108 (25%), Positives = 50/108 (46%), Gaps = 1/108 (0%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKL-DEL 59
+I+ + G E K + K +VV ++ YC+ M+ V+R + +E
Sbjct: 267 LINGYVSLGDVEAAKGVLKFMSEKGVSRNVVTYTLLIKGYCKQCKMDEAEKVLRGMQEEA 326
Query: 60 AISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLI 107
A+ PD + +LI +C+ A R + +M R G + +C+SLI
Sbjct: 327 ALVPDERAYGVLIDGYCRTGKIDDAVRLLDEMLRLGLKTNLFICNSLI 374
Score = 38.9 bits (89), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 22/119 (18%), Positives = 55/119 (46%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I +C++ + ++ G E + + + NS++ ++ + ++ ++
Sbjct: 548 LIDGYCKASNVGQAFKVKGAMEREXISPSIEMYNSLISGLFKSRRLVEXTDLLTEMGIRG 607
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEA 119
++P+ T+ LI +CKE M A+ + +M G +CS+++ L ++ EA
Sbjct: 608 LTPNIVTYGALIDGWCKEGMLDKAFSSYFEMTENGLSANIIICSTMVSGLYRLGRIDEA 666
Score = 35.4 bits (80), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 13/47 (27%), Positives = 29/47 (61%)
Query: 29 DVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYF 75
DV +++ M+ A+C+ G ++ ++K++ L + P+ T+H LI +
Sbjct: 225 DVFMVSIMVNAFCKDGKVDEAAGFVKKMENLGVEPNIVTYHSLINGY 271
>gi|147862640|emb|CAN81487.1| hypothetical protein VITISV_033285 [Vitis vinifera]
Length = 1024
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/107 (24%), Positives = 54/107 (50%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+IS FC+ G E+ +L + K ++ + N+++ C++GD++ + + E
Sbjct: 654 LISGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLFDGMPEKG 713
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLI 107
+ PD T+ +I +CK + A+ +M KG QP + ++L+
Sbjct: 714 LEPDSVTYSTMIDGYCKSENVAEAFSLFHEMPSKGVQPHSFVYNALV 760
Score = 48.9 bits (115), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 24/107 (22%), Positives = 53/107 (49%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ A C++G K++ + + K + + + ++ C+ GD++ + + R + E
Sbjct: 234 LVGALCKTGDLRGAKRVLIEMDEKGLNPNEFIYSLVIEGMCQVGDIDEAVELKRSMGEKG 293
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLI 107
+ P+ T+ I+ C+ K A T +M + G +P+ CS+LI
Sbjct: 294 LVPNTYTYTIITAGLCRAKRMNEAKLTFEEMQKTGLKPDYNACSALI 340
Score = 44.7 bits (104), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 31/127 (24%), Positives = 54/127 (42%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+IS ++G EE + + + K D V + + Y +TG M ++ +
Sbjct: 514 IISCLSKAGKMEEASTYLLEIQGRGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHG 573
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ P+ + +LI K M A +H G P+ + CS+ I L K EAL
Sbjct: 574 LMPNNPLYTVLINGHFKAGNLMEALSIFRRLHALGVLPDVQTCSAFIHGLLKNGRVQEAL 633
Query: 121 SVYNMLR 127
V++ L+
Sbjct: 634 KVFSELK 640
Score = 40.4 bits (93), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 26/122 (21%), Positives = 56/122 (45%)
Query: 2 ISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAI 61
I ++G +E ++ + + K DV +S++ +C+ G++E + ++ I
Sbjct: 620 IHGLLKNGRVQEALKVFSELKEKGLVPDVFTYSSLISGFCKQGEVEKAFELHDEMCLKGI 679
Query: 62 SPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEALS 121
+P+ ++ L+ CK A + M KG +P+ S++I K +EA S
Sbjct: 680 APNIFIYNALVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYSTMIDGYCKSENVAEAFS 739
Query: 122 VY 123
++
Sbjct: 740 LF 741
Score = 39.3 bits (90), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 28/126 (22%), Positives = 56/126 (44%), Gaps = 4/126 (3%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I F R G +E ++ + +++ N ++ C+ G ME +++ + L
Sbjct: 339 LIDGFMREGDIDEVLRIKDVMVSCGIPINLITYNVLIHGLCKFGKMEKAAEILKGMVTLG 398
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
P+ TF +LI+ +C+E A + +M ++ P ++I L H + L
Sbjct: 399 CKPNSRTFCLLIEGYCREHNMGRALELLDEMEKRNLVPSAVSYGAMINGL----CHCKDL 454
Query: 121 SVYNML 126
S+ N L
Sbjct: 455 SLANKL 460
Score = 37.7 bits (86), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 29/119 (24%), Positives = 52/119 (43%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C++G EE L + + + D V S++ Y + G V + K+
Sbjct: 828 VIDWHCKAGKMEEANLLFKEMQERNLIVDTVTYTSLMYGYNKLGQSSEVFALFEKMVAKG 887
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEA 119
+ PD T+ ++I CKE + A++ ++ KG + + LI L K +EA
Sbjct: 888 VKPDEVTYGLVIYAHCKEDNLVEAFKLRDEVVGKGMLTKGTIHDLLITALCKREDLTEA 946
Score = 35.8 bits (81), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 36/135 (26%), Positives = 60/135 (44%), Gaps = 11/135 (8%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLL--NSMLCAYCRTGDMESVMHVMRKLDE 58
+I ++ R G +E + F AK D + L+ NS+L + G ME V + +
Sbjct: 164 LIDSYKRMGMLDEAANVF--FVAKNDSILISLIRCNSLLKDLLKCGMMELFWKVYNGMLD 221
Query: 59 LAISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSE 118
+ D T+ L+ CK A R +++M KG P E + S +I + ++ E
Sbjct: 222 AKMGFDVYTYTYLVGALCKTGDLRGAKRVLIEMDEKGLNPNEFIYSLVIEGMCQVGDIDE 281
Query: 119 ALSVYNMLRYSKRSM 133
A+ + KRSM
Sbjct: 282 AVEL-------KRSM 289
>gi|357499119|ref|XP_003619848.1| CCP [Medicago truncatula]
gi|355494863|gb|AES76066.1| CCP [Medicago truncatula]
Length = 556
Score = 51.2 bits (121), Expect = 1e-04, Method: Composition-based stats.
Identities = 35/127 (27%), Positives = 58/127 (45%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I FCR+G + E KQL + K +V N ++ A+CR G M + + +
Sbjct: 265 LIRGFCRTGQWGEVKQLMCEMVNKNINPNVYTFNVLIDAFCRKGKMIEAQGMFNLMVKRG 324
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
PD TF+ LI C + A + + +G P+ + LI K + EA+
Sbjct: 325 QQPDIVTFNTLISGHCLHGNVLEARKLFDTVFERGILPDVWSYTILIIGYCKCKRIDEAV 384
Query: 121 SVYNMLR 127
S++N +R
Sbjct: 385 SLFNEMR 391
Score = 44.3 bits (103), Expect = 0.017, Method: Composition-based stats.
Identities = 23/79 (29%), Positives = 43/79 (54%)
Query: 29 DVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYMLAYRTM 88
D++ S++ +CRTG V +M ++ I+P+ TF++LI FC++ + A
Sbjct: 258 DILTYTSLIRGFCRTGQWGEVKQLMCEMVNKNINPNVYTFNVLIDAFCRKGKMIEAQGMF 317
Query: 89 VDMHRKGHQPEEELCSSLI 107
M ++G QP+ ++LI
Sbjct: 318 NLMVKRGQQPDIVTFNTLI 336
Score = 42.0 bits (97), Expect = 0.080, Method: Composition-based stats.
Identities = 34/126 (26%), Positives = 57/126 (45%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I AFCR G E + + + + D+V N+++ +C G++ + + E
Sbjct: 300 LIDAFCRKGKMIEAQGMFNLMVKRGQQPDIVTFNTLISGHCLHGNVLEARKLFDTVFERG 359
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
I PD ++ ILI +CK K A +M K + L SSLI L K S A
Sbjct: 360 ILPDVWSYTILIIGYCKCKRIDEAVSLFNEMRCKNMVLDIVLYSSLIDGLCKSGRISYAW 419
Query: 121 SVYNML 126
+++ +
Sbjct: 420 ELFSTI 425
Score = 41.6 bits (96), Expect = 0.11, Method: Composition-based stats.
Identities = 28/126 (22%), Positives = 58/126 (46%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ C+ G + QL + E + K ++V+ N ++ ++C+ + K+ ++
Sbjct: 195 LINGLCKIGRSIDAFQLLQEMEGQVVKPNIVIYNMIIDSFCKDELTCKARDLYLKIVDMG 254
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
I PD T+ LI+ FC+ + + M +M K P + LI + EA
Sbjct: 255 IDPDILTYTSLIRGFCRTGQWGEVKQLMCEMVNKNINPNVYTFNVLIDAFCRKGKMIEAQ 314
Query: 121 SVYNML 126
++N++
Sbjct: 315 GMFNLM 320
Score = 40.0 bits (92), Expect = 0.28, Method: Composition-based stats.
Identities = 28/126 (22%), Positives = 56/126 (44%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C+SG +L +V+ N ++ A+C+ D++ + + + +
Sbjct: 405 LIDGLCKSGRISYAWELFSTINNDGPPPNVITYNILIDAFCKIQDIDMGIELFKLMCGKG 464
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
++P T++ILI +CK K A + M K P+ +SL L K S+A
Sbjct: 465 LTPTVLTYNILINGYCKSKRIREAMNLLSVMQSKNLAPDSITYNSLFDGLCKSGRISDAW 524
Query: 121 SVYNML 126
++ ++
Sbjct: 525 ELFKVM 530
Score = 38.9 bits (89), Expect = 0.79, Method: Composition-based stats.
Identities = 28/127 (22%), Positives = 57/127 (44%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I +C+ +E L + K D+VL +S++ C++G + + ++
Sbjct: 370 LIIGYCKCKRIDEAVSLFNEMRCKNMVLDIVLYSSLIDGLCKSGRISYAWELFSTINNDG 429
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
P+ T++ILI FCK + + M KG P + LI K + EA+
Sbjct: 430 PPPNVITYNILIDAFCKIQDIDMGIELFKLMCGKGLTPTVLTYNILINGYCKSKRIREAM 489
Query: 121 SVYNMLR 127
++ ++++
Sbjct: 490 NLLSVMQ 496
>gi|242071495|ref|XP_002451024.1| hypothetical protein SORBIDRAFT_05g022840 [Sorghum bicolor]
gi|241936867|gb|EES10012.1| hypothetical protein SORBIDRAFT_05g022840 [Sorghum bicolor]
Length = 813
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/124 (21%), Positives = 63/124 (50%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I A+ + G + + + + + DVV ++++ A CR G M+ + ++ +
Sbjct: 397 LIKAYAKCGMLDRATIIFNEMREQGVEPDVVTYSTVIAALCRIGKMDDAVEKFNQMIDQG 456
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
++P +T+H LI+ FC + A ++ M KG +P+ + +I +L K+ +A
Sbjct: 457 VAPSISTYHFLIQGFCTHGDLLKAKDLVLQMMNKGMRPDIGCFNFIINNLCKLGRVMDAQ 516
Query: 121 SVYN 124
++++
Sbjct: 517 NIFD 520
Score = 42.0 bits (97), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 35/160 (21%), Positives = 69/160 (43%), Gaps = 1/160 (0%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++++ C+ G ++ + + K K D+ ML Y G + + + +
Sbjct: 327 LMASLCKHGKIKDARDVFDSMAMKGQKTDIFSYKIMLNGYATKGCLVDLTELFNLMLSDG 386
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
I+PD + F++LIK + K M A +M +G +P+ S++I L ++ +A+
Sbjct: 387 IAPDSHIFNVLIKAYAKCGMLDRATIIFNEMREQGVEPDVVTYSTVIAALCRIGKMDDAV 446
Query: 121 SVYN-MLRYSKRSMCKALHEKILHILISGKLLKDAYIVVK 159
+N M+ H I G LLK +V++
Sbjct: 447 EKFNQMIDQGVAPSISTYHFLIQGFCTHGDLLKAKDLVLQ 486
Score = 39.7 bits (91), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 22/94 (23%), Positives = 44/94 (46%)
Query: 29 DVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYMLAYRTM 88
+ V N+++ + + GD+ + ++ + ISPD +T++ ++ CK + A +
Sbjct: 215 NAVAYNTVIDGFFKEGDVNKACDLFNEMVQRGISPDLSTYNCVVNALCKARAMDKAEAIL 274
Query: 89 VDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSV 122
M KG P+ +SLI+ EA+ V
Sbjct: 275 RQMVDKGVLPDNWTYNSLIYGYSSTGQWKEAVRV 308
>gi|356524104|ref|XP_003530672.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
mitochondrial-like [Glycine max]
Length = 742
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 59/127 (46%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+++ FC SG E+ ++L K + NS++ YC +M + + + + +
Sbjct: 573 LMNGFCMSGMLEDGERLIKWMLDKGIMPNATTFNSLMKQYCIRNNMRATIEIYKGMHAQG 632
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ PD NT++ILIK CK + A+ +M KG +SLI K + EA
Sbjct: 633 VVPDTNTYNILIKGHCKARNMKEAWFLHKEMVEKGFSLTAASYNSLIKGFYKRKKFEEAR 692
Query: 121 SVYNMLR 127
++ +R
Sbjct: 693 KLFEEMR 699
Score = 48.9 bits (115), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 31/122 (25%), Positives = 60/122 (49%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
MI C++G E ++L + +K K D V +++ YC+ G+M+ + ++ E
Sbjct: 398 MIHGLCQAGKVVEARKLFSEMLSKGLKPDEVTYTALIDGYCKAGEMKEAFSLHNQMVEKG 457
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
++P+ T+ L+ CK +A + +M KG QP ++LI L K+ +A+
Sbjct: 458 LTPNVVTYTALVDGLCKCGEVDIANELLHEMSEKGLQPNVCTYNALINGLCKVGNIEQAV 517
Query: 121 SV 122
+
Sbjct: 518 KL 519
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 26/107 (24%), Positives = 50/107 (46%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ C+ G E+ +L + + D + +++ AYC+ G+M ++R + +
Sbjct: 503 LINGLCKVGNIEQAVKLMEEMDLAGFFPDTITYTTIMDAYCKMGEMAKAHELLRIMLDKG 562
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLI 107
+ P TF++L+ FC M R + M KG P +SL+
Sbjct: 563 LQPTIVTFNVLMNGFCMSGMLEDGERLIKWMLDKGIMPNATTFNSLM 609
Score = 43.1 bits (100), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 28/126 (22%), Positives = 61/126 (48%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+IS C++G E +Q+ + + D V+ +++ + ++G++ + ++
Sbjct: 328 IISFLCKTGRVVEAEQVLRVMKNQRIFPDNVVYTTLISGFGKSGNVSVEYKLFDEMKRKK 387
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
I PD+ T+ +I C+ + A + +M KG +P+E ++LI K EA
Sbjct: 388 IVPDFVTYTSMIHGLCQAGKVVEARKLFSEMLSKGLKPDEVTYTALIDGYCKAGEMKEAF 447
Query: 121 SVYNML 126
S++N +
Sbjct: 448 SLHNQM 453
Score = 42.0 bits (97), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 22/98 (22%), Positives = 46/98 (46%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ C+ G + +L + K + +V N+++ C+ G++E + +M ++D
Sbjct: 468 LVDGLCKCGEVDIANELLHEMSEKGLQPNVCTYNALINGLCKVGNIEQAVKLMEEMDLAG 527
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQP 98
PD T+ ++ +CK A+ + M KG QP
Sbjct: 528 FFPDTITYTTIMDAYCKMGEMAKAHELLRIMLDKGLQP 565
Score = 41.2 bits (95), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 25/107 (23%), Positives = 51/107 (47%)
Query: 6 CRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDY 65
C+ G +E L E + + DVV + ++ YC+ + V+ +M +L + P+
Sbjct: 263 CQLGKVKEAHSLLIQMEFRGNVPDVVSYSVIVDGYCQVEQLGKVLKLMEELQRKGLKPNQ 322
Query: 66 NTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGK 112
T++ +I + CK + A + + M + P+ + ++LI GK
Sbjct: 323 YTYNSIISFLCKTGRVVEAEQVLRVMKNQRIFPDNVVYTTLISGFGK 369
Score = 37.7 bits (86), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 27/119 (22%), Positives = 52/119 (43%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ A+C+ G + +L K + +V N ++ +C +G +E +++ + +
Sbjct: 538 IMDAYCKMGEMAKAHELLRIMLDKGLQPTIVTFNVLMNGFCMSGMLEDGERLIKWMLDKG 597
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEA 119
I P+ TF+ L+K +C MH +G P+ + LI K R EA
Sbjct: 598 IMPNATTFNSLMKQYCIRNNMRATIEIYKGMHAQGVVPDTNTYNILIKGHCKARNMKEA 656
Score = 37.0 bits (84), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 28/124 (22%), Positives = 54/124 (43%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ +C+ + +L + + K K + NS++ C+TG + V+R +
Sbjct: 293 IVDGYCQVEQLGKVLKLMEELQRKGLKPNQYTYNSIISFLCKTGRVVEAEQVLRVMKNQR 352
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
I PD + LI F K + Y+ +M RK P+ +S+I L + EA
Sbjct: 353 IFPDNVVYTTLISGFGKSGNVSVEYKLFDEMKRKKIVPDFVTYTSMIHGLCQAGKVVEAR 412
Query: 121 SVYN 124
+++
Sbjct: 413 KLFS 416
>gi|297809467|ref|XP_002872617.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297318454|gb|EFH48876.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 584
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/123 (22%), Positives = 59/123 (47%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++S FC+ G ++ + E + K V ++ + R+ +ME + + ++EL
Sbjct: 379 LVSGFCKKGDTSGAGKVVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRSSMEELG 438
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
++PD +T+ +LI FC + A R M K +P E + ++++ K + AL
Sbjct: 439 LTPDVHTYSVLIHGFCIKGRMNEASRLFKSMVEKKFEPNEVIYNTMVLGYCKEGSSYRAL 498
Query: 121 SVY 123
++
Sbjct: 499 RLF 501
Score = 44.3 bits (103), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 27/120 (22%), Positives = 55/120 (45%), Gaps = 2/120 (1%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I FC G E +L K + + V+ N+M+ YC+ G + + R+++E
Sbjct: 449 LIHGFCIKGRMNEASRLFKSMVEKKFEPNEVIYNTMVLGYCKEGSSYRALRLFREMEEKE 508
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ P+ ++ +I+ CKE+ A + M G P + + + + K +HS ++
Sbjct: 509 LPPNVASYRYMIEVLCKERKSKEAEGLVEKMIDSGIGPSDSILN--LISRAKNDSHSRSM 566
Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 20/98 (20%), Positives = 45/98 (45%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I CR E ++ ++ +++ N+++ +C + + + R L
Sbjct: 309 LIGGLCREMKANEANEVMDQMKSDGINPNLITYNTLIDGFCGVRKLGKALSLCRDLKSRG 368
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQP 98
+SP T++IL+ FCK+ A + + +M +G +P
Sbjct: 369 LSPSLVTYNILVSGFCKKGDTSGAGKVVKEMEERGIKP 406
Score = 41.6 bits (96), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 26/107 (24%), Positives = 45/107 (42%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I FC + L D +++ +V N ++ +C+ GD V+++++E
Sbjct: 344 LIDGFCGVRKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCKKGDTSGAGKVVKEMEERG 403
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLI 107
I P T+ ILI F + A + M G P+ S LI
Sbjct: 404 IKPSKVTYTILIDTFARSDNMEKAIQLRSSMEELGLTPDVHTYSVLI 450
>gi|255578371|ref|XP_002530052.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223530468|gb|EEF32352.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 554
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/121 (27%), Positives = 58/121 (47%), Gaps = 4/121 (3%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ C+ C ++ L + DVV N+++ A+C+ GD S + ++ +
Sbjct: 296 LLKGICKGNCPDKAYLLMTNKMWPKGLCDVVSYNTIIKAFCKIGDTTSAYKLFEEMGQKG 355
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHL---GKMR-AH 116
I PD TF I IK F + + +A + + M G P+ +++I HL GK+ AH
Sbjct: 356 IPPDVVTFTIFIKAFLGKGSFNIAKKLLDQMTEMGLSPDCIFYTTIIDHLCKSGKVEMAH 415
Query: 117 S 117
S
Sbjct: 416 S 416
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 36/158 (22%), Positives = 70/158 (44%), Gaps = 5/158 (3%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I AFC+ G +L + K DVV + A+ G ++ ++ E+
Sbjct: 331 IIKAFCKIGDTTSAYKLFEEMGQKGIPPDVVTFTIFIKAFLGKGSFNIAKKLLDQMTEMG 390
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+SPD + +I + CK +A+ DM +G P+ ++LI K SEA+
Sbjct: 391 LSPDCIFYTTIIDHLCKSGKVEMAHSIFCDMVEQGISPDVISFNALINGFCKCSRVSEAM 450
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLKDAYIVV 158
+Y ++ + +++ + LI G L+++ I +
Sbjct: 451 HLYEEMQNR-----GSYPDEVTYKLIIGGLIEEKKISI 483
Score = 43.9 bits (102), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 38/154 (24%), Positives = 64/154 (41%), Gaps = 4/154 (2%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
I AF G F K+L D + +++ C++G +E + + E
Sbjct: 366 FIKAFLGKGSFNIAKKLLDQMTEMGLSPDCIFYTTIIDHLCKSGKVEMAHSIFCDMVEQG 425
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
ISPD +F+ LI FCK A +M +G P+E +I L + + S A
Sbjct: 426 ISPDVISFNALINGFCKCSRVSEAMHLYEEMQNRGSYPDEVTYKLIIGGLIEEKKISIAC 485
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLKDA 154
V+ + ++ +A I LI G +++A
Sbjct: 486 MVWGQMMDKGFTLDRA----IAQTLIRGNSIENA 515
Score = 42.4 bits (98), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 18/73 (24%), Positives = 36/73 (49%)
Query: 27 KYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYMLAYR 86
K ++ N+++ +CR G ++ + + PD T+++ + YFC E M A +
Sbjct: 217 KLSTLVYNALISGFCRAGRIDKAQAIKSFMRRNGCEPDLVTYNVFLNYFCDELMLDDAKK 276
Query: 87 TMVDMHRKGHQPE 99
+ M R G +P+
Sbjct: 277 LLKLMERSGIEPD 289
Score = 41.2 bits (95), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 28/110 (25%), Positives = 46/110 (41%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
I+ C+ F +L D E D+ N L G ++ + V K+ +
Sbjct: 85 FITGLCKVKNFTFIDELLHDMETLNCLPDIWAFNIYLHLLFVEGRIDLALEVFEKIVKNG 144
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHL 110
PD T+ I+I CK K + A + DM KG P+ + C +++ L
Sbjct: 145 RKPDVVTYTIIIHGVCKIKKFDTAIQFWRDMIHKGFSPDNKACGAIVVGL 194
Score = 36.2 bits (82), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 24/96 (25%), Positives = 45/96 (46%), Gaps = 1/96 (1%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+IS FCR+G ++ + + + D+V N L +C ++ +++ ++
Sbjct: 226 LISGFCRAGRIDKAQAIKSFMRRNGCEPDLVTYNVFLNYFCDELMLDDAKKLLKLMERSG 285
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVD-MHRKG 95
I PD +++ L+K CK AY M + M KG
Sbjct: 286 IEPDVYSYNQLLKGICKGNCPDKAYLLMTNKMWPKG 321
>gi|413944227|gb|AFW76876.1| hypothetical protein ZEAMMB73_037126 [Zea mays]
Length = 595
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/94 (24%), Positives = 45/94 (47%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++S C++G F +L G + VV +++ YC+ G + + + R +DE
Sbjct: 423 LLSGLCKAGDFSAVDELLGHMIDDGCQPSVVTFGTLVHGYCKAGKTDEALRIFRSMDEAR 482
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRK 94
I P+ ++ LI + CK + +A + +M K
Sbjct: 483 IQPNTVIYNTLIDFLCKSREVDVAIKLFDEMREK 516
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/155 (23%), Positives = 64/155 (41%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I FCR E +L + + + DV N++L C+ GD +V ++ + +
Sbjct: 388 LIGGFCRKKKLHEAYELLEEMKGVGLQPDVYTYNTLLSGLCKAGDFSAVDELLGHMIDDG 447
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
P TF L+ +CK A R M QP + ++LI L K R A+
Sbjct: 448 CQPSVVTFGTLVHGYCKAGKTDEALRIFRSMDEARIQPNTVIYNTLIDFLCKSREVDVAI 507
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLKDAY 155
+++ +R + +L L K+ + A+
Sbjct: 508 KLFDEMREKNVPANVTTYNALLKGLQDKKMAEKAF 542
Score = 37.0 bits (84), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 25/123 (20%), Positives = 48/123 (39%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
MIS ++G + A + K D N ++ +CR + ++ ++ +
Sbjct: 353 MISGLTQAGRLLDACTTAASMKKAGFKLDAKAYNILIGGFCRKKKLHEAYELLEEMKGVG 412
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ PD T++ L+ CK + + M G QP +L+ K EAL
Sbjct: 413 LQPDVYTYNTLLSGLCKAGDFSAVDELLGHMIDDGCQPSVVTFGTLVHGYCKAGKTDEAL 472
Query: 121 SVY 123
++
Sbjct: 473 RIF 475
>gi|413936133|gb|AFW70684.1| hypothetical protein ZEAMMB73_229858 [Zea mays]
Length = 375
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/127 (26%), Positives = 59/127 (46%), Gaps = 6/127 (4%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSML---CAYCRTGDMESVMHVMRKLD 57
+I C G + +L + ++ K D+V N++L C+ R D E +M M + D
Sbjct: 121 IIGGLCEQGNVDSALELLSNMQSFGCKPDIVTYNTVLKGLCSADRWEDAEELMIKMSQND 180
Query: 58 ELAISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHS 117
L D +TF+ +I ++C++ + + A M KG P S++I L K
Sbjct: 181 RLR---DNSTFNTIISFWCQKGLILQALEVFKQMPEKGCNPNSTTYSTIIGGLVKASKME 237
Query: 118 EALSVYN 124
+AL + N
Sbjct: 238 QALELLN 244
>gi|449485308|ref|XP_004157129.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At4g31850, chloroplastic-like [Cucumis sativus]
Length = 1113
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/120 (25%), Positives = 54/120 (45%), Gaps = 10/120 (8%)
Query: 18 AGDFEAKYDKYDVV----------LLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNT 67
A DF+ + +DV+ N+++C R G +E + ++ ++ + + P T
Sbjct: 380 ARDFDEAFATFDVMRKQGILPNLHTYNTLICGLLRAGRIEDALKLLDTMESVGVQPTAYT 439
Query: 68 FHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVYNMLR 127
+ I YF K A T M KG P C++ ++ L +M EA +++N LR
Sbjct: 440 YITFIDYFGKSGETGKAVETFEKMKAKGIVPNIVACNASLYSLAEMGRLREAKTMFNGLR 499
Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 32/126 (25%), Positives = 59/126 (46%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I A C +G E K+L +A K D V+ ++L + GD+++ +++
Sbjct: 303 LIDALCNAGQLENAKELFVKMKANGHKPDQVIYITLLDKFNDFGDLDTFKEFWSQMEADG 362
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
PD TF IL+ CK + + A+ T M ++G P ++LI L + +AL
Sbjct: 363 YMPDVVTFTILVDVLCKARDFDEAFATFDVMRKQGILPNLHTYNTLICGLLRAGRIEDAL 422
Query: 121 SVYNML 126
+ + +
Sbjct: 423 KLLDTM 428
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/130 (25%), Positives = 58/130 (44%), Gaps = 6/130 (4%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYD---KYDVVLLNSMLCAYCRTGDMESVMHVMRKLD 57
+I + G EE +L FE D K + + N ++ Y + GD E+ + +++
Sbjct: 899 LIDGLAKVGRLEEAMRL---FEEMSDYGCKPNCAIFNILINGYGKIGDTETACQLFKRMV 955
Query: 58 ELAISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHS 117
I PD ++ IL+ C A ++ G P+ + +I LGK +
Sbjct: 956 NEGIRPDLKSYTILVDCLCLAGRVDEALYYFNELKSTGLDPDFIAYNRIINGLGKSQRME 1015
Query: 118 EALSVYNMLR 127
EAL++YN +R
Sbjct: 1016 EALALYNEMR 1025
Score = 39.3 bits (90), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 37/147 (25%), Positives = 66/147 (44%), Gaps = 6/147 (4%)
Query: 2 ISAFCRSGCFEETKQLAGDFE---AKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDE 58
I F +SG ET + FE AK ++V N+ L + G + + L E
Sbjct: 444 IDYFGKSG---ETGKAVETFEKMKAKGIVPNIVACNASLYSLAEMGRLREAKTMFNGLRE 500
Query: 59 LAISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSE 118
++PD T+++++K + K A + +M R G +P+ + +SLI L K E
Sbjct: 501 NGLAPDSVTYNMMMKCYSKVGQVDEAVNLLSEMIRNGCEPDVIVVNSLIDSLYKAGRVDE 560
Query: 119 ALSVYNMLRYSKRSMCKALHEKILHIL 145
A +++ ++ K S + +L L
Sbjct: 561 AWQMFDRMKDMKLSPTVVTYNTLLSGL 587
Score = 38.9 bits (89), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 17/66 (25%), Positives = 31/66 (46%)
Query: 42 RTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEE 101
R G ++ + R++D+ PD T+ +LI C A V M GH+P++
Sbjct: 274 RAGKIDEAYEIFRRMDDEGCGPDLVTYTVLIDALCNAGQLENAKELFVKMKANGHKPDQV 333
Query: 102 LCSSLI 107
+ +L+
Sbjct: 334 IYITLL 339
>gi|449459086|ref|XP_004147277.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g59900-like [Cucumis sativus]
gi|449501214|ref|XP_004161309.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g59900-like [Cucumis sativus]
Length = 908
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/156 (22%), Positives = 69/156 (44%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+IS +C+ G + +L + K + V +++C C+ M + ++ EL
Sbjct: 476 LISGYCKDGLVPKAFKLYHEMTGKGIAPNTVTFTALICGLCQINKMAEASKLFDEMVELK 535
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
I P+ T+++LI+ C+E A+ + +M +KG P+ LI L SEA
Sbjct: 536 ILPNEVTYNVLIEGHCREGNTTRAFELLDEMIKKGLSPDTYTYRPLIAGLCSTGRVSEAK 595
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLKDAYI 156
N L + + + + + +L +K+A +
Sbjct: 596 EFINDLHHKHQRLDELCYTALLQGFCKEGRIKEALV 631
Score = 42.7 bits (99), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 23/107 (21%), Positives = 52/107 (48%), Gaps = 1/107 (0%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ C +G E K+ D K+ + D + ++L +C+ G ++ + +++
Sbjct: 581 LIAGLCSTGRVSEAKEFINDLHHKHQRLDELCYTALLQGFCKEGRIKEALVARQEMVGRG 640
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLI 107
+ D ++ +LI + +L + + +MH KG QP+ + + LI
Sbjct: 641 LQMDLVSYAVLISGALNQNDRIL-FELLREMHGKGMQPDNVIYTILI 686
Score = 41.2 bits (95), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 28/124 (22%), Positives = 50/124 (40%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ C F + K++ E +V N + C++ + + V R L E
Sbjct: 231 VVKCLCELKDFNKAKEIINQAEGNGCSLSIVTYNVFINGLCKSKRVWEAVEVKRSLGEKG 290
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ D T+ L+ C+ + + + M +M G+ P E S LI L KM + A
Sbjct: 291 LKADLVTYCTLVLGLCRIQEFEVGMEMMDEMIELGYVPSEAAVSGLIEGLIKMGSIEGAF 350
Query: 121 SVYN 124
+ N
Sbjct: 351 ELLN 354
Score = 39.3 bits (90), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 25/112 (22%), Positives = 50/112 (44%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I +C+ G F+E +L D + ++ + YC+ G++++ M + + +
Sbjct: 789 LIRGYCQIGKFQEAAKLLDVMIGIGMVPDCITYSTFIYEYCKRGNVDAAMDMWECMLQRG 848
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGK 112
+ PD F+ LI C A + DM +G +P + SL+ L +
Sbjct: 849 LKPDRVVFNFLIHACCLNGELDRALQLRNDMMLRGLKPTQSTYHSLMVQLAQ 900
>gi|356562834|ref|XP_003549673.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g74580-like [Glycine max]
Length = 747
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/99 (23%), Positives = 49/99 (49%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I +C+ + ++ ++ DV+ N++L C+ G E VM + + ++E
Sbjct: 441 LIDGYCKQLKLDSATEMVNRMWSQGMTPDVITYNTLLNGLCKAGKSEEVMEIFKAMEEKG 500
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPE 99
+P+ T++I++ CK K A + +M KG +P+
Sbjct: 501 CTPNIITYNIIVDSLCKAKKVNEAVDLLGEMKSKGLKPD 539
Score = 44.3 bits (103), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 38/159 (23%), Positives = 67/159 (42%), Gaps = 17/159 (10%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVM---------H 51
++ C+ G E+++L G + ++ N + CR G ++ +
Sbjct: 222 LVHVLCKKGLVFESERLLGKVLKRGVCPNLFTFNIFVQGLCREGALDRAVRNSRVVEAEE 281
Query: 52 VMRKLDELAISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLG 111
+RK+ PD T++ +I +CK+ M A R + D KG +P+E SLI
Sbjct: 282 YLRKMVNGGFEPDDLTYNSIIDGYCKKGMVQDANRVLKDAVFKGFKPDEFTYCSLINGFC 341
Query: 112 KMRAHSEALSVYNMLRYSKRSMCKALHEKIL--HILISG 148
K A++V+ K + K L I+ + LI G
Sbjct: 342 KDGDPDRAMAVF------KDGLGKGLRPSIVLYNTLIKG 374
Score = 41.2 bits (95), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 20/101 (19%), Positives = 49/101 (48%), Gaps = 1/101 (0%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLD-EL 59
++ + C++ E L G+ ++K K DVV ++ +C+ GD++ + R+++ +
Sbjct: 511 IVDSLCKAKKVNEAVDLLGEMKSKGLKPDVVSFGTLFTGFCKIGDIDGAYQLFRRMEKQY 570
Query: 60 AISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEE 100
+ T++I++ F ++ +A + M G P+
Sbjct: 571 DVCHTTATYNIIVSAFSEQLNMNMAMKLFSVMKNSGCDPDN 611
Score = 41.2 bits (95), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 28/119 (23%), Positives = 53/119 (44%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I +C+ G ++ ++ D K K D S++ +C+ GD + M V +
Sbjct: 301 IIDGYCKKGMVQDANRVLKDAVFKGFKPDEFTYCSLINGFCKDGDPDRAMAVFKDGLGKG 360
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEA 119
+ P ++ LIK ++ + + A + M +M G P + +I L KM S+A
Sbjct: 361 LRPSIVLYNTLIKGLSQQGLILPALQLMNEMAENGCLPNIWTYNLVINGLCKMGCVSDA 419
>gi|115487378|ref|NP_001066176.1| Os12g0152600 [Oryza sativa Japonica Group]
gi|77553036|gb|ABA95832.1| Rf1 protein, mitochondrial precursor, putative, expressed [Oryza
sativa Japonica Group]
gi|113648683|dbj|BAF29195.1| Os12g0152600 [Oryza sativa Japonica Group]
gi|125535802|gb|EAY82290.1| hypothetical protein OsI_37500 [Oryza sativa Indica Group]
gi|125578525|gb|EAZ19671.1| hypothetical protein OsJ_35247 [Oryza sativa Japonica Group]
Length = 716
Score = 51.2 bits (121), Expect = 1e-04, Method: Composition-based stats.
Identities = 40/157 (25%), Positives = 70/157 (44%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ +C++G +E L GD + V+ N +L YCR GD+E +++ E
Sbjct: 378 LINGYCKAGNLKEALWLFGDLKRAGLAPSVLTYNILLDGYCRLGDLEEARRFKQEMVEQG 437
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
PD +T+ IL+ K + + +M KG QP+ ++ I + + SEA
Sbjct: 438 CQPDVSTYTILMNGSRKVRNLAMVREFFDEMLSKGLQPDCFAYNTRISAELILGSTSEAF 497
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLKDAYIV 157
+ ++ S + L L LKDAY++
Sbjct: 498 QLTEVMISRGISSDTVTYNIFLDGLCKSGNLKDAYVL 534
Score = 43.5 bits (101), Expect = 0.029, Method: Composition-based stats.
Identities = 31/124 (25%), Positives = 53/124 (42%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I A C G E + + V + AYCR G++ S +K+ E
Sbjct: 553 LIHAHCERGRLREARDIFDGMLVSGLPPSAVTYTVFIHAYCRRGNLYSAYGWFQKMLEEG 612
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ P+ T+++LI C+ LAY+ +M +G P + + LI K EA+
Sbjct: 613 VRPNEVTYNVLIHALCRMGRTNLAYQHFHEMLERGLSPNKYTYTLLIDGNCKEGNWEEAI 672
Query: 121 SVYN 124
+Y+
Sbjct: 673 RLYS 676
Score = 42.4 bits (98), Expect = 0.068, Method: Composition-based stats.
Identities = 35/149 (23%), Positives = 67/149 (44%), Gaps = 1/149 (0%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I RSG E + + A D++ NS++ YC+ G+++ + + L
Sbjct: 343 IIHGMFRSGNVEAARMKFVEMRAMGLLPDLITYNSLINGYCKAGNLKEALWLFGDLKRAG 402
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
++P T++IL+ +C+ A R +M +G QP+ + L+ K+R +
Sbjct: 403 LAPSVLTYNILLDGYCRLGDLEEARRFKQEMVEQGCQPDVSTYTILMNGSRKVRNLAMVR 462
Query: 121 SVYN-MLRYSKRSMCKALHEKILHILISG 148
++ ML + C A + +I LI G
Sbjct: 463 EFFDEMLSKGLQPDCFAYNTRISAELILG 491
Score = 39.7 bits (91), Expect = 0.41, Method: Composition-based stats.
Identities = 26/98 (26%), Positives = 42/98 (42%)
Query: 2 ISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAI 61
I A+CR G + + + V N ++ A CR G ++ E +
Sbjct: 589 IHAYCRRGNLYSAYGWFQKMLEEGVRPNEVTYNVLIHALCRMGRTNLAYQHFHEMLERGL 648
Query: 62 SPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPE 99
SP+ T+ +LI CKE + A R +MH+ G P+
Sbjct: 649 SPNKYTYTLLIDGNCKEGNWEEAIRLYSEMHQHGIHPD 686
>gi|242046334|ref|XP_002461038.1| hypothetical protein SORBIDRAFT_02g039560 [Sorghum bicolor]
gi|241924415|gb|EER97559.1| hypothetical protein SORBIDRAFT_02g039560 [Sorghum bicolor]
Length = 595
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/121 (23%), Positives = 56/121 (46%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ +CRSG +++ ++ D + K DV++ ++ C+ G V + +
Sbjct: 199 LLRGYCRSGRWQDVGKVFEDMSRRGIKPDVIMFTGLIDDLCKEGKTGKAAKVKDMMVQRG 258
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ P+ T+++LI CKE A +M KG P+ ++LI L + EA+
Sbjct: 259 LEPNVVTYNVLINSLCKEGSVREALTLRKEMDDKGVAPDVVTYNTLIAGLSGVLEMDEAM 318
Query: 121 S 121
S
Sbjct: 319 S 319
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/107 (25%), Positives = 54/107 (50%), Gaps = 1/107 (0%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+++A C+ G E L + + K D + ++M+ C++GDM++V +++ + +
Sbjct: 446 LLAAMCQQGMMERAMGLFNEMD-KNCGLDAIAYSTMIHGACKSGDMKTVKQLIQDMLDEG 504
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLI 107
++PD T+ +LI + K A R + M G P+ + SLI
Sbjct: 505 LAPDAVTYSMLINMYAKLGDLEEAERVLKQMTASGFVPDVAVFDSLI 551
Score = 42.7 bits (99), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 32/122 (26%), Positives = 53/122 (43%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C + + +L + + +VV+ + +L YCR+G + V V +
Sbjct: 164 LIRGLCDASELDAALELLDEMCGSGVQPNVVVYSCLLRGYCRSGRWQDVGKVFEDMSRRG 223
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
I PD F LI CKE A + M ++G +P + LI L K + EAL
Sbjct: 224 IKPDVIMFTGLIDDLCKEGKTGKAAKVKDMMVQRGLEPNVVTYNVLINSLCKEGSVREAL 283
Query: 121 SV 122
++
Sbjct: 284 TL 285
Score = 42.0 bits (97), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 27/107 (25%), Positives = 48/107 (44%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
MI C+SG + KQL D + D V + ++ Y + GD+E V++++
Sbjct: 480 MIHGACKSGDMKTVKQLIQDMLDEGLAPDAVTYSMLINMYAKLGDLEEAERVLKQMTASG 539
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLI 107
PD F LIK + E + + +M K + ++ S++I
Sbjct: 540 FVPDVAVFDSLIKGYSAEGQTDKVLKLIHEMRAKNVAFDPKIISTII 586
Score = 41.2 bits (95), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 24/126 (19%), Positives = 57/126 (45%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ C S E L +A + DVV +++ C ++++ + ++ ++
Sbjct: 129 VMRGLCASRRTGEAVALLRSMQASGVRADVVTYGTLIRGLCDASELDAALELLDEMCGSG 188
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ P+ + L++ +C+ + + DM R+G +P+ + + LI L K +A
Sbjct: 189 VQPNVVVYSCLLRGYCRSGRWQDVGKVFEDMSRRGIKPDVIMFTGLIDDLCKEGKTGKAA 248
Query: 121 SVYNML 126
V +M+
Sbjct: 249 KVKDMM 254
>gi|225432738|ref|XP_002279088.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22670,
mitochondrial [Vitis vinifera]
Length = 535
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/134 (24%), Positives = 65/134 (48%), Gaps = 5/134 (3%)
Query: 29 DVVLLNS-----MLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYML 83
D +LLN ++ +C+ M++ + M ++ E PD ++ +++ +C+EK +
Sbjct: 251 DSILLNPHTFNVLIHGWCKARKMDNALKSMAEMKEHGFCPDVISYTSIVEAYCREKDFRK 310
Query: 84 AYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVYNMLRYSKRSMCKALHEKILH 143
+ +M KG P + ++ LGK + S+AL VY ++ S + + +++
Sbjct: 311 VNSVLNEMEEKGCPPNVVTYTIVMHALGKGKEISKALEVYEKMKGSSCVPDTSFYSSLIY 370
Query: 144 ILISGKLLKDAYIV 157
IL LKDA V
Sbjct: 371 ILSKAGRLKDARDV 384
Score = 39.3 bits (90), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 42/95 (44%)
Query: 29 DVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYMLAYRTM 88
DV+ S++ AYCR D V V+ +++E P+ T+ I++ K K A
Sbjct: 291 DVISYTSIVEAYCREKDFRKVNSVLNEMEEKGCPPNVVTYTIVMHALGKGKEISKALEVY 350
Query: 89 VDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVY 123
M P+ SSLI+ L K +A V+
Sbjct: 351 EKMKGSSCVPDTSFYSSLIYILSKAGRLKDARDVF 385
Score = 37.7 bits (86), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 19/79 (24%), Positives = 39/79 (49%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I ++G ++ + + D + DV+ N+M+ A C E + ++ K++E +
Sbjct: 368 LIYILSKAGRLKDARDVFEDMTKQGAIPDVLTYNTMISAACMHSQEEDALKLLLKMEESS 427
Query: 61 ISPDYNTFHILIKYFCKEK 79
PD NT+ L+K C+
Sbjct: 428 CKPDLNTYSPLLKMCCRNN 446
>gi|46091165|dbj|BAD13711.1| PPR protein [Oryza sativa Indica Group]
Length = 794
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/152 (24%), Positives = 70/152 (46%), Gaps = 5/152 (3%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I +C +G +E +L + K D V N+++ YC+ ME + + R+++
Sbjct: 520 LIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSG 579
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+SPD T++I+++ + + A V + G Q E + ++ L K EAL
Sbjct: 580 VSPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQLELSTYNIILHGLCKNNLTDEAL 639
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLK 152
++ L + L + +I+I G LLK
Sbjct: 640 RMFQNLCLTDLQ----LETRTFNIMI-GALLK 666
Score = 41.2 bits (95), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 33/154 (21%), Positives = 67/154 (43%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I + C+ G E+++L K D++ ++++ YC G M+ ++ + +
Sbjct: 485 IIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVG 544
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ PD T++ LI +CK A +M G P+ + ++ L + R + A
Sbjct: 545 MKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAK 604
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLKDA 154
+Y + S + + + ILH L L +A
Sbjct: 605 ELYVGITESGTQLELSTYNIILHGLCKNNLTDEA 638
Score = 41.2 bits (95), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 18/66 (27%), Positives = 34/66 (51%)
Query: 34 NSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHR 93
NS++ YC +G + + ++K+ + PD T++ L+ Y CK A + M +
Sbjct: 273 NSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTK 332
Query: 94 KGHQPE 99
+G +PE
Sbjct: 333 RGLKPE 338
Score = 39.7 bits (91), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 31/136 (22%), Positives = 63/136 (46%), Gaps = 17/136 (12%)
Query: 8 SGCFEETKQLAGDFEAKYDKY----------DVVLLNSMLCAYCRTGDMESVMHVMRKLD 57
+G F+E GD + Y Y +VV +S++ A C+ M+ M V+ +
Sbjct: 207 NGFFKE-----GDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMV 261
Query: 58 ELAISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHS 117
+ + P+ T++ ++ +C A + MH G +P+ +SL+ +L K +
Sbjct: 262 KNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCT 321
Query: 118 EALSVYNMLRYSKRSM 133
EA +++ + +KR +
Sbjct: 322 EARKMFDSM--TKRGL 335
Score = 37.0 bits (84), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 21/75 (28%), Positives = 35/75 (46%)
Query: 36 MLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKG 95
++CAY + G ++ M V K+ + ++PD T+ +I CK A R M +
Sbjct: 380 LICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDER 439
Query: 96 HQPEEELCSSLIFHL 110
P + +SLI L
Sbjct: 440 LSPGNIVYNSLIHSL 454
Score = 36.2 bits (82), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 29/154 (18%), Positives = 63/154 (40%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ +C SG +E + + DVV NS++ C+ G + + +
Sbjct: 275 IVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRG 334
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ P+ T+ L++ + + + + + M R G P + S LI K +A+
Sbjct: 335 LKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAM 394
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLKDA 154
V++ +R + + ++ IL ++DA
Sbjct: 395 LVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDA 428
>gi|41152686|dbj|BAD08211.1| hypothetical protein [Oryza sativa Indica Group]
gi|67906118|dbj|BAE00069.1| PPR protein [Oryza sativa Indica Group]
Length = 794
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/152 (24%), Positives = 70/152 (46%), Gaps = 5/152 (3%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I +C +G +E +L + K D V N+++ YC+ ME + + R+++
Sbjct: 520 LIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSG 579
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+SPD T++I+++ + + A V + G Q E + ++ L K EAL
Sbjct: 580 VSPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQLELSTYNIILHGLCKNNLTDEAL 639
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLK 152
++ L + L + +I+I G LLK
Sbjct: 640 RMFQNLCLTDLQ----LETRTFNIMI-GALLK 666
Score = 42.0 bits (97), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 32/136 (23%), Positives = 63/136 (46%), Gaps = 17/136 (12%)
Query: 8 SGCFEETKQLAGDFEAKYDKY----------DVVLLNSMLCAYCRTGDMESVMHVMRKLD 57
+G F+E GD + Y Y +VV NS++ A C+ M+ M V+ +
Sbjct: 207 NGFFKE-----GDLDKAYGTYHEMLDRGILPNVVTYNSIIAALCKAQAMDKAMEVLTSMV 261
Query: 58 ELAISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHS 117
+ + P+ T++ ++ +C A + MH G +P+ +SL+ +L K +
Sbjct: 262 KNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCT 321
Query: 118 EALSVYNMLRYSKRSM 133
EA +++ + +KR +
Sbjct: 322 EARKMFDSM--TKRGL 335
Score = 41.2 bits (95), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 18/66 (27%), Positives = 34/66 (51%)
Query: 34 NSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHR 93
NS++ YC +G + + ++K+ + PD T++ L+ Y CK A + M +
Sbjct: 273 NSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTK 332
Query: 94 KGHQPE 99
+G +PE
Sbjct: 333 RGLKPE 338
Score = 39.7 bits (91), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 32/154 (20%), Positives = 67/154 (43%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I + C+ G E+++L K +++ ++++ YC G M+ ++ + +
Sbjct: 485 IIDSHCKEGRVIESEKLFDLMVRIGVKPNIITYSTLIDGYCLAGKMDEATKLLASMVSVG 544
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ PD T++ LI +CK A +M G P+ + ++ L + R + A
Sbjct: 545 MKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAK 604
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLKDA 154
+Y + S + + + ILH L L +A
Sbjct: 605 ELYVGITESGTQLELSTYNIILHGLCKNNLTDEA 638
Score = 37.0 bits (84), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 21/75 (28%), Positives = 35/75 (46%)
Query: 36 MLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKG 95
++CAY + G ++ M V K+ + ++PD T+ +I CK A R M +
Sbjct: 380 LICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDER 439
Query: 96 HQPEEELCSSLIFHL 110
P + +SLI L
Sbjct: 440 LSPGNIVYNSLIHSL 454
Score = 36.2 bits (82), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 29/154 (18%), Positives = 63/154 (40%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ +C SG +E + + DVV NS++ C+ G + + +
Sbjct: 275 IVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRG 334
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ P+ T+ L++ + + + + + M R G P + S LI K +A+
Sbjct: 335 LKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAM 394
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLKDA 154
V++ +R + + ++ IL ++DA
Sbjct: 395 LVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDA 428
>gi|302794530|ref|XP_002979029.1| hypothetical protein SELMODRAFT_109908 [Selaginella moellendorffii]
gi|300153347|gb|EFJ19986.1| hypothetical protein SELMODRAFT_109908 [Selaginella moellendorffii]
Length = 500
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 56/131 (42%), Gaps = 1/131 (0%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+IS CR+ + ++L D V NS++ YC+ G M+ + R++ A
Sbjct: 296 LISGLCRAEKVIQARELFEKMTQACIPPDAVAYNSLIAGYCKRGSMDEAEKLYREMSGGA 355
Query: 61 -ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEA 119
+ P TF+ LI FCK A + +M KG + LI L + EA
Sbjct: 356 GLQPTIVTFNTLIDGFCKLGKLGRANELVAEMGTKGLAADSCTYRILIAGLSRATKLDEA 415
Query: 120 LSVYNMLRYSK 130
L VY +R K
Sbjct: 416 LEVYKQMREKK 426
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/127 (28%), Positives = 60/127 (47%), Gaps = 2/127 (1%)
Query: 29 DVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYMLAYRTM 88
DV N ++ + R+ +ME V + + E PD ++HILI K + + +
Sbjct: 44 DVFAFNGVMQGFARSNNMEKAREVYQHMVESGYKPDNVSYHILIHGLAKIGKLDESLKIL 103
Query: 89 VDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVYN-MLRYSKRSMCKALHEKILHILIS 147
+M +G P + SSL+ L K R A S+++ M+R +E IL + +
Sbjct: 104 SEMVMRGQTPSMQAYSSLVRALAKARRVDHASSLFDEMIRGGHHPDRLMFYELILGLCQA 163
Query: 148 GKLLKDA 154
GK +KDA
Sbjct: 164 GK-VKDA 169
Score = 39.7 bits (91), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 29/123 (23%), Positives = 54/123 (43%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ A C++ EE +L A +V+ ++++ CRTG++E + V + E
Sbjct: 226 LLDAVCKARRVEEGCKLFEAMRAAGYVPNVITFSTLIHGLCRTGELEKALEVFGSMLEAG 285
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
P+ T+ LI C+ + + A M + P+ +SLI K + EA
Sbjct: 286 CKPNKYTYTTLISGLCRAEKVIQARELFEKMTQACIPPDAVAYNSLIAGYCKRGSMDEAE 345
Query: 121 SVY 123
+Y
Sbjct: 346 KLY 348
Score = 37.4 bits (85), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 26/110 (23%), Positives = 44/110 (40%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ C SG E+ L + ++ DVV N++L A C+ +E + +
Sbjct: 191 LLHGLCSSGQLEQANTLFAEMKSHSCSPDVVTYNTLLDAVCKARRVEEGCKLFEAMRAAG 250
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHL 110
P+ TF LI C+ A M G +P + ++LI L
Sbjct: 251 YVPNVITFSTLIHGLCRTGELEKALEVFGSMLEAGCKPNKYTYTTLISGL 300
Score = 36.6 bits (83), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 26/126 (20%), Positives = 53/126 (42%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C++G ++ + + +V + N +L C +G +E + ++ +
Sbjct: 156 LILGLCQAGKVKDASERFKQMPKHGCQPNVPVYNVLLHGLCSSGQLEQANTLFAEMKSHS 215
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
SPD T++ L+ CK + + M G+ P S+LI L + +AL
Sbjct: 216 CSPDVVTYNTLLDAVCKARRVEEGCKLFEAMRAAGYVPNVITFSTLIHGLCRTGELEKAL 275
Query: 121 SVYNML 126
V+ +
Sbjct: 276 EVFGSM 281
>gi|297805766|ref|XP_002870767.1| EMB2745 [Arabidopsis lyrata subsp. lyrata]
gi|297316603|gb|EFH47026.1| EMB2745 [Arabidopsis lyrata subsp. lyrata]
Length = 747
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/107 (28%), Positives = 55/107 (51%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ C +G + + D + K DVV +++L +CR+ D++ + V RK+
Sbjct: 421 LINGHCIAGKMVDAIAVLEDMKEKGLTPDVVSYSTVLSGFCRSYDVDEALRVKRKMVAKG 480
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLI 107
I PD T+ LI+ FC+++ A +M R G P+E ++LI
Sbjct: 481 IKPDTITYSSLIQGFCEQRRTKEACDLFDEMLRVGLPPDEFTYTALI 527
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 39/163 (23%), Positives = 75/163 (46%), Gaps = 8/163 (4%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I +C+ ++ +L K + +++ N ++ CR G M+ + V+ ++++
Sbjct: 246 LIDGYCKLRKIDDGFELLRSMALKGLEPNLISYNVVINGLCREGRMKEISFVLTEMNKRG 305
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
S D T++ LIK +CKE + A +M R G P +SLI + K + A
Sbjct: 306 YSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLSPSVITYTSLIHSMCKAGNMNRAT 365
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISG----KLLKDAYIVVK 159
+ +R R +C +E+ L+ G + +AY V+K
Sbjct: 366 EFLDQMRV--RGLCP--NERTYTTLVDGFSQKGYMNEAYRVLK 404
Score = 43.9 bits (102), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 31/128 (24%), Positives = 57/128 (44%), Gaps = 1/128 (0%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ F + G E ++ + VV N+++ +C G M + V+ + E
Sbjct: 386 LVDGFSQKGYMNEAYRVLKEMIDNGFSPSVVTYNALINGHCIAGKMVDAIAVLEDMKEKG 445
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
++PD ++ ++ FC+ A R M KG +P+ SSLI + R EA
Sbjct: 446 LTPDVVSYSTVLSGFCRSYDVDEALRVKRKMVAKGIKPDTITYSSLIQGFCEQRRTKEAC 505
Query: 121 SVYN-MLR 127
+++ MLR
Sbjct: 506 DLFDEMLR 513
Score = 41.6 bits (96), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 31/119 (26%), Positives = 52/119 (43%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++S FCRS +E ++ AK K D + +S++ +C + + ++ +
Sbjct: 456 VLSGFCRSYDVDEALRVKRKMVAKGIKPDTITYSSLIQGFCEQRRTKEACDLFDEMLRVG 515
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEA 119
+ PD T+ LI +C E A + +M KG P+ S LI L K EA
Sbjct: 516 LPPDEFTYTALINAYCMEGDLQKAIQLHNEMVEKGVLPDVVTYSVLINGLNKQARTREA 574
Score = 40.0 bits (92), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 22/108 (20%), Positives = 57/108 (52%), Gaps = 2/108 (1%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I FC +G + + E K +VV N+++ YC+ ++ ++R +
Sbjct: 211 LIRGFCLAGNLDVALRFFDRMEKKGCLPNVVTYNTLIDGYCKLRKIDDGFELLRSMALKG 270
Query: 61 ISPDYNTFHILIKYFCKE-KMYMLAYRTMVDMHRKGHQPEEELCSSLI 107
+ P+ +++++I C+E +M +++ + +M+++G+ +E ++LI
Sbjct: 271 LEPNLISYNVVINGLCREGRMKEISF-VLTEMNKRGYSLDEVTYNTLI 317
Score = 37.4 bits (85), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 21/107 (19%), Positives = 46/107 (42%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I +C+ G F + + + V+ S++ + C+ G+M + ++
Sbjct: 316 LIKGYCKEGNFHQALVMHAEMLRHGLSPSVITYTSLIHSMCKAGNMNRATEFLDQMRVRG 375
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLI 107
+ P+ T+ L+ F ++ AYR + +M G P ++LI
Sbjct: 376 LCPNERTYTTLVDGFSQKGYMNEAYRVLKEMIDNGFSPSVVTYNALI 422
>gi|115482730|ref|NP_001064958.1| Os10g0497300 [Oryza sativa Japonica Group]
gi|41152691|dbj|BAD08215.1| hypothetical protein [Oryza sativa Japonica Group]
gi|113639567|dbj|BAF26872.1| Os10g0497300 [Oryza sativa Japonica Group]
gi|215693996|dbj|BAG89195.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 794
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/152 (24%), Positives = 70/152 (46%), Gaps = 5/152 (3%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I +C +G +E +L + K D V N+++ YC+ ME + + R+++
Sbjct: 520 LIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSG 579
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+SPD T++I+++ + + A V + G Q E + ++ L K EAL
Sbjct: 580 VSPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQLELSTYNIILHGLCKNNLTDEAL 639
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLK 152
++ L + L + +I+I G LLK
Sbjct: 640 RMFQNLCLTDLQ----LETRTFNIMI-GALLK 666
Score = 41.2 bits (95), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 33/154 (21%), Positives = 67/154 (43%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I + C+ G E+++L K D++ ++++ YC G M+ ++ + +
Sbjct: 485 IIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVG 544
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ PD T++ LI +CK A +M G P+ + ++ L + R + A
Sbjct: 545 MKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAK 604
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLKDA 154
+Y + S + + + ILH L L +A
Sbjct: 605 ELYVGITESGTQLELSTYNIILHGLCKNNLTDEA 638
Score = 41.2 bits (95), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 18/66 (27%), Positives = 34/66 (51%)
Query: 34 NSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHR 93
NS++ YC +G + + ++K+ + PD T++ L+ Y CK A + M +
Sbjct: 273 NSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTK 332
Query: 94 KGHQPE 99
+G +PE
Sbjct: 333 RGLKPE 338
Score = 39.7 bits (91), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 31/136 (22%), Positives = 63/136 (46%), Gaps = 17/136 (12%)
Query: 8 SGCFEETKQLAGDFEAKYDKY----------DVVLLNSMLCAYCRTGDMESVMHVMRKLD 57
+G F+E GD + Y Y +VV +S++ A C+ M+ M V+ +
Sbjct: 207 NGFFKE-----GDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMV 261
Query: 58 ELAISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHS 117
+ + P+ T++ ++ +C A + MH G +P+ +SL+ +L K +
Sbjct: 262 KNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCT 321
Query: 118 EALSVYNMLRYSKRSM 133
EA +++ + +KR +
Sbjct: 322 EARKMFDSM--TKRGL 335
Score = 37.0 bits (84), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 21/75 (28%), Positives = 35/75 (46%)
Query: 36 MLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKG 95
++CAY + G ++ M V K+ + ++PD T+ +I CK A R M +
Sbjct: 380 LICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDER 439
Query: 96 HQPEEELCSSLIFHL 110
P + +SLI L
Sbjct: 440 LSPGNIVYNSLIHSL 454
Score = 36.2 bits (82), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 29/154 (18%), Positives = 63/154 (40%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ +C SG +E + + DVV NS++ C+ G + + +
Sbjct: 275 IVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRG 334
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ P+ T+ L++ + + + + + M R G P + S LI K +A+
Sbjct: 335 LKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAM 394
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLKDA 154
V++ +R + + ++ IL ++DA
Sbjct: 395 LVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDA 428
>gi|302769103|ref|XP_002967971.1| hypothetical protein SELMODRAFT_145138 [Selaginella moellendorffii]
gi|300164709|gb|EFJ31318.1| hypothetical protein SELMODRAFT_145138 [Selaginella moellendorffii]
Length = 1354
Score = 50.8 bits (120), Expect = 2e-04, Method: Composition-based stats.
Identities = 28/123 (22%), Positives = 60/123 (48%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+++ + R + ++L D + + D+ + N M+ Y + G V + + E+
Sbjct: 781 LLALYSRETVEIDAEELVKDIKKAGLELDMDIYNHMISLYSKLGSYRKAALVFKGMQEIG 840
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
SPD TF+ LI + + +M A + +M + G+ P ++LI G+++A+ +A
Sbjct: 841 CSPDATTFNTLIMLYSRNQMVQEAQALLREMIKTGNAPNISTYTTLISAYGRLQAYEDAE 900
Query: 121 SVY 123
V+
Sbjct: 901 LVF 903
Score = 40.4 bits (93), Expect = 0.24, Method: Composition-based stats.
Identities = 34/132 (25%), Positives = 54/132 (40%), Gaps = 1/132 (0%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ AF R G EE +++ G D + N+M+ Y + G + ++ E
Sbjct: 261 VLHAFARDGRIEEVERIRGMMRDARCSSDEITYNTMIHMYGKAGMHRKAEELYVQMKEEG 320
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
PD TF +LI K A DM + +P + S++I K S+A
Sbjct: 321 RCPDSVTFTVLIDTLGKAGFVNEAAAMFEDMLKSQVRPTLQAFSAMICAYAKADMFSDAE 380
Query: 121 SVYN-MLRYSKR 131
Y+ MLR R
Sbjct: 381 HTYSCMLRAGVR 392
Score = 38.9 bits (89), Expect = 0.63, Method: Composition-based stats.
Identities = 24/79 (30%), Positives = 42/79 (53%), Gaps = 1/79 (1%)
Query: 30 VVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYM-LAYRTM 88
V + NS++ Y R GD SV ++ ++ + PD TF+I+IK + M LA +
Sbjct: 114 VQVYNSLMSVYARHGDWNSVQQLLCRMQDRGCRPDLVTFNIVIKARTRGGMQEGLASSLL 173
Query: 89 VDMHRKGHQPEEELCSSLI 107
D++ G +P+ ++LI
Sbjct: 174 QDVYAAGLRPDTITYNTLI 192
Score = 38.1 bits (87), Expect = 1.4, Method: Composition-based stats.
Identities = 24/104 (23%), Positives = 48/104 (46%), Gaps = 2/104 (1%)
Query: 29 DVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYMLAYRTM 88
D+ N+M+ Y R G +E+ + R + E +PD T++ ++ F ++ R +
Sbjct: 219 DIWTYNAMISVYGRAGRVEAASSIFRIMQEQGFTPDAVTYNSVLHAFARDGRIEEVER-I 277
Query: 89 VDMHRKGHQPEEELCSSLIFHL-GKMRAHSEALSVYNMLRYSKR 131
M R +E+ + + H+ GK H +A +Y ++ R
Sbjct: 278 RGMMRDARCSSDEITYNTMIHMYGKAGMHRKAEELYVQMKEEGR 321
Score = 37.4 bits (85), Expect = 1.9, Method: Composition-based stats.
Identities = 23/107 (21%), Positives = 47/107 (43%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++SA+ +G FE + + A + + N +L A+ R G + + ++L E+
Sbjct: 676 LLSAYAETGNFERATRALDNMVAAGLQPNAACANYVLEAFGRAGKAKELSEFYQRLPEMG 735
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLI 107
I+P+ TF ++ F + A M G P ++ +L+
Sbjct: 736 ITPNSRTFVVIFHAFSRNGNLEEARSMYRQMREAGFSPSIQVFKALL 782
Score = 35.8 bits (81), Expect = 6.0, Method: Composition-based stats.
Identities = 18/89 (20%), Positives = 45/89 (50%)
Query: 39 AYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQP 98
A+ R G++E + R++ E SP F L+ + +E + + A + D+ + G +
Sbjct: 749 AFSRNGNLEEARSMYRQMREAGFSPSIQVFKALLALYSRETVEIDAEELVKDIKKAGLEL 808
Query: 99 EEELCSSLIFHLGKMRAHSEALSVYNMLR 127
+ ++ + +I K+ ++ +A V+ ++
Sbjct: 809 DMDIYNHMISLYSKLGSYRKAALVFKGMQ 837
>gi|242047668|ref|XP_002461580.1| hypothetical protein SORBIDRAFT_02g005000 [Sorghum bicolor]
gi|241924957|gb|EER98101.1| hypothetical protein SORBIDRAFT_02g005000 [Sorghum bicolor]
Length = 532
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 53/115 (46%)
Query: 29 DVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYMLAYRTM 88
DVV NS++ C+ M+ V+R++ + I PD T++ L+ + A R +
Sbjct: 155 DVVTCNSIIDGLCKVQAMDKAEEVLRQMFDKHIMPDCTTYNSLVHGYLSSGQLKEAVRIL 214
Query: 89 VDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVYNMLRYSKRSMCKALHEKILH 143
M R G P S LI L K H+EA + N + S+ + A + +LH
Sbjct: 215 KQMSRHGQPPNGVTYSMLIDCLCKFGGHTEAREILNSMIQSRGNPNVATYGGLLH 269
Score = 35.8 bits (81), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 26/123 (21%), Positives = 58/123 (47%), Gaps = 1/123 (0%)
Query: 29 DVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYMLAYRTM 88
D++ +M+ C+ G +++ M ++ + +SPD F LI F + A
Sbjct: 330 DIISYGTMIDGLCKIGRLDAAMSQFCQMIDDGLSPDIVVFTNLIHGFSMYGKWEKAEELF 389
Query: 89 VDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVYNMLRYSKRSMCKALHEKILH-ILIS 147
+M +G +P + +++I L K +EA ++++++ + + I+H ++
Sbjct: 390 YEMMDRGIRPTVVVFTTMIDKLFKEGKVTEAKTLFDLMPIASVKPNVVSYNAIIHGYFLA 449
Query: 148 GKL 150
GKL
Sbjct: 450 GKL 452
>gi|302769784|ref|XP_002968311.1| hypothetical protein SELMODRAFT_89033 [Selaginella moellendorffii]
gi|300163955|gb|EFJ30565.1| hypothetical protein SELMODRAFT_89033 [Selaginella moellendorffii]
Length = 600
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/122 (26%), Positives = 57/122 (46%), Gaps = 3/122 (2%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ C+ +E + L EAK + + N+++C CR G + M +++ +
Sbjct: 369 VINGLCKEKRVDEAEVLLSGMEAKGCSPNAISFNTLICGQCRAGKWKKAMTTFKEMLKRG 428
Query: 61 ISPDYNTFHILIKYFCKEKM--YMLAYRTMVD-MHRKGHQPEEELCSSLIFHLGKMRAHS 117
+ P T++IL+ CK + + T+ D M KG P+ S+LI LGK
Sbjct: 429 VKPTVVTYNILVDGLCKARQEGRIKEAITLFDAMIEKGRVPDVVTYSALIDGLGKAGKLD 488
Query: 118 EA 119
+A
Sbjct: 489 DA 490
Score = 42.0 bits (97), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 31/120 (25%), Positives = 52/120 (43%), Gaps = 2/120 (1%)
Query: 1 MISAFCRSGCFEETKQLAGD-FEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDEL 59
++S C G + + L +A Y DVV N++L +C+ G ++ + + +
Sbjct: 91 LLSGLCNGGRMSDAQALYERMIKAGYSP-DVVTYNTLLHGFCKVGKLDEALKIFDGAVKR 149
Query: 60 AISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEA 119
PD T++ LI FCK A R + M + P+ +SL+ L K EA
Sbjct: 150 GFVPDVVTYNALINGFCKADKLDEAQRILQRMVSESLVPDVVTYNSLVNGLCKNGRVDEA 209
Score = 41.2 bits (95), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 25/110 (22%), Positives = 51/110 (46%), Gaps = 3/110 (2%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ FC+ G +E ++ + DVV N+++ +C+ ++ +++++ +
Sbjct: 126 LLHGFCKVGKLDEALKIFDGAVKRGFVPDVVTYNALINGFCKADKLDEAQRILQRMVSES 185
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHL 110
+ PD T++ L+ CK A +VD KG P S+LI L
Sbjct: 186 LVPDVVTYNSLVNGLCKNGRVDEARMLIVD---KGFSPNVITYSTLISGL 232
Score = 39.7 bits (91), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 28/128 (21%), Positives = 60/128 (46%), Gaps = 3/128 (2%)
Query: 2 ISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAI 61
I C++G E+ + D + K DVV N+++ C+ ++ ++ ++
Sbjct: 335 IDGLCKAGRVEDALLMLKDMDEKGCVPDVVSHNAVINGLCKEKRVDEAEVLLSGMEAKGC 394
Query: 62 SPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHS---E 118
SP+ +F+ LI C+ + A T +M ++G +P + L+ L K R E
Sbjct: 395 SPNAISFNTLICGQCRAGKWKKAMTTFKEMLKRGVKPTVVTYNILVDGLCKARQEGRIKE 454
Query: 119 ALSVYNML 126
A+++++ +
Sbjct: 455 AITLFDAM 462
Score = 39.3 bits (90), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 29/120 (24%), Positives = 50/120 (41%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I ++G ++ ++L G EAK +V NS++ C ++ + + + E
Sbjct: 477 LIDGLGKAGKLDDARRLLGAMEAKGCIPNVYTYNSLISGLCGLDKVDEALELFVAMVEKG 536
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
PD T+ +I CK++M A G P + SLI L + EAL
Sbjct: 537 CVPDTITYGTIISALCKQEMVDKALALFDGSLEAGVVPTSGMYFSLIDGLCAVARVDEAL 596
Score = 38.5 bits (88), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 29/127 (22%), Positives = 61/127 (48%), Gaps = 4/127 (3%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRT-GDMESVMHVMRKLDEL 59
+++ C++G +E + L D K +V+ ++++ CR +ES ++ K+
Sbjct: 196 LVNGLCKNGRVDEARMLIVD---KGFSPNVITYSTLISGLCRELRRLESARQLLEKMVLN 252
Query: 60 AISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEA 119
PD +++ LI +E+ A + + R+G++PE + LI L K +EA
Sbjct: 253 GCKPDIVSYNALIHGLAREQGVSEALKLFGSVLRQGYEPEVPTYNILIDGLLKEDRVNEA 312
Query: 120 LSVYNML 126
+++ L
Sbjct: 313 FELFSGL 319
Score = 35.8 bits (81), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 23/87 (26%), Positives = 39/87 (44%), Gaps = 2/87 (2%)
Query: 29 DVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYMLAYRTM 88
D + + C+ G +E + +++ +DE PD + + +I CKEK A +
Sbjct: 327 DAITYTVFIDGLCKAGRVEDALLMLKDMDEKGCVPDVVSHNAVINGLCKEKRVDEAEVLL 386
Query: 89 VDMHRKGHQPEEELCSSLIFHLGKMRA 115
M KG P ++LI G+ RA
Sbjct: 387 SGMEAKGCSPNAISFNTLI--CGQCRA 411
>gi|147772266|emb|CAN67349.1| hypothetical protein VITISV_018089 [Vitis vinifera]
Length = 483
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 20/79 (25%), Positives = 45/79 (56%)
Query: 29 DVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYMLAYRTM 88
+V LN ++CA+C+ G +E + V +K++ + SP +++ LI +C + + +
Sbjct: 180 NVYTLNMVMCAFCKWGKLEKAIEVFKKMETMGFSPTITSYNTLIAGYCNKGLLNSGMKLK 239
Query: 89 VDMHRKGHQPEEELCSSLI 107
+ M + G +P++ ++LI
Sbjct: 240 ILMEKNGVRPDDVTFNTLI 258
Score = 44.7 bits (104), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 38/161 (23%), Positives = 67/161 (41%), Gaps = 13/161 (8%)
Query: 4 AFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISP 63
AFC+ G E+ ++ E + N+++ YC G + S M + +++ + P
Sbjct: 190 AFCKWGKLEKAIEVFKKMETMGFSPTITSYNTLIAGYCNKGLLNSGMKLKILMEKNGVRP 249
Query: 64 DYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKM-------RAH 116
D TF+ LI FC+ A + +M P ++LI ++ R H
Sbjct: 250 DDVTFNTLINGFCRGGKLHEANKIFSEMKANDVVPNTITYNTLINGYSQVGNSEMGGRLH 309
Query: 117 SEALSVYNMLRYSKRSMCKALHEKILHILISGKLLKDAYIV 157
E MLR ++ + IL + + G+ K AY+V
Sbjct: 310 DE------MLRNGIKADILTYNALILGLCMEGRTKKAAYLV 344
Score = 38.1 bits (87), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 36/152 (23%), Positives = 64/152 (42%), Gaps = 5/152 (3%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ + + G E +L + K D++ N+++ C G + +++++LD
Sbjct: 292 LINGYSQVGNSEMGGRLHDEMLRNGIKADILTYNALILGLCMEGRTKKAAYLVKELDREN 351
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ P+ +TF LI C K A++ M R G P LI K A+
Sbjct: 352 LVPNSSTFSALITGQCVRKNSERAFQLYKSMIRSGCHPNYHTFKMLISTFCKNEDFDGAV 411
Query: 121 SVYNMLRYSKRSMCK---ALHEKILHILISGK 149
V + S+RS+ L E + +SGK
Sbjct: 412 EVVREM--SERSIAPDSDTLSELCRGLWLSGK 441
Score = 37.4 bits (85), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 24/107 (22%), Positives = 47/107 (43%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ FCR G E ++ + +A + + N+++ Y + G+ E + ++
Sbjct: 257 LINGFCRGGKLHEANKIFSEMKANDVVPNTITYNTLINGYSQVGNSEMGGRLHDEMLRNG 316
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLI 107
I D T++ LI C E A + ++ R+ P S+LI
Sbjct: 317 IKADILTYNALILGLCMEGRTKKAAYLVKELDRENLVPNSSTFSALI 363
>gi|302788594|ref|XP_002976066.1| hypothetical protein SELMODRAFT_53130 [Selaginella moellendorffii]
gi|300156342|gb|EFJ22971.1| hypothetical protein SELMODRAFT_53130 [Selaginella moellendorffii]
Length = 440
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/122 (26%), Positives = 58/122 (47%), Gaps = 3/122 (2%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ C+ +E + L EAK + + N+++C CR G + M +++ +
Sbjct: 259 VINGLCKEKRVDEAEVLLSGMEAKGCSPNAISFNTLICGQCRAGKWKKAMTTFKEMLKRG 318
Query: 61 ISPDYNTFHILIKYFCK--EKMYMLAYRTMVD-MHRKGHQPEEELCSSLIFHLGKMRAHS 117
+ P T++IL+ CK ++ + T+ D M KG P+ S+LI LGK
Sbjct: 319 VKPTVVTYNILVDGLCKARQEGRIKEAITLFDAMIEKGRVPDVVTYSALIDGLGKAGKLD 378
Query: 118 EA 119
+A
Sbjct: 379 DA 380
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 40/165 (24%), Positives = 70/165 (42%), Gaps = 11/165 (6%)
Query: 1 MISAFCRSGCFEETKQLAGD-FEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDEL 59
++S C G + + L +A Y DVV N++L +C+ G+++ + + +
Sbjct: 16 LLSGLCNGGRMSDAQALYERMIKAGYSP-DVVTYNTLLHGFCKVGELDEALKIFDGAVKR 74
Query: 60 AISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEA 119
PD T++ LI FCK A R + M + P+ +SL+ L K EA
Sbjct: 75 GFVPDVVTYNALINGFCKADKLDEAQRILQRMVSENLVPDVVTYNSLVNGLCKNGRVDEA 134
Query: 120 LSVY-------NMLRYSK--RSMCKALHEKILHILISGKLLKDAY 155
+ N++ YS +C+ L + + G +LK Y
Sbjct: 135 RMLIVDKGFSPNVITYSTLISGLCRELRGVSEALKLFGSVLKQGY 179
Score = 39.7 bits (91), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 28/128 (21%), Positives = 60/128 (46%), Gaps = 3/128 (2%)
Query: 2 ISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAI 61
I C++G E+ + D + K DVV N+++ C+ ++ ++ ++
Sbjct: 225 IDGLCKAGRVEDALLMLKDMDEKGCVPDVVSHNAVINGLCKEKRVDEAEVLLSGMEAKGC 284
Query: 62 SPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHS---E 118
SP+ +F+ LI C+ + A T +M ++G +P + L+ L K R E
Sbjct: 285 SPNAISFNTLICGQCRAGKWKKAMTTFKEMLKRGVKPTVVTYNILVDGLCKARQEGRIKE 344
Query: 119 ALSVYNML 126
A+++++ +
Sbjct: 345 AITLFDAM 352
Score = 35.8 bits (81), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 23/87 (26%), Positives = 39/87 (44%), Gaps = 2/87 (2%)
Query: 29 DVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYMLAYRTM 88
D + + C+ G +E + +++ +DE PD + + +I CKEK A +
Sbjct: 217 DAITYTVFIDGLCKAGRVEDALLMLKDMDEKGCVPDVVSHNAVINGLCKEKRVDEAEVLL 276
Query: 89 VDMHRKGHQPEEELCSSLIFHLGKMRA 115
M KG P ++LI G+ RA
Sbjct: 277 SGMEAKGCSPNAISFNTLI--CGQCRA 301
>gi|255572227|ref|XP_002527053.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223533615|gb|EEF35353.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 677
Score = 50.8 bits (120), Expect = 2e-04, Method: Composition-based stats.
Identities = 28/102 (27%), Positives = 51/102 (50%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ F + ++ L E K + DVV N +L +CR G M+ ++RK+ E
Sbjct: 576 LINGFVKGEYMDKAFFLINKMETKGLQPDVVTYNVILNGFCRQGRMQEAELILRKMIERG 635
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEEL 102
I PD +T+ LI + + A+R +M ++G P+++
Sbjct: 636 IDPDRSTYTTLINGYVSQDNLKEAFRFHDEMLQRGFVPDDDF 677
Score = 50.4 bits (119), Expect = 2e-04, Method: Composition-based stats.
Identities = 30/124 (24%), Positives = 56/124 (45%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
M++A C+ ++ K D E K D+V N+++ AYCR G + VM +
Sbjct: 191 MVNALCKDHKIDDVKPFLIDMEQKGIFADIVTYNTLINAYCREGLLGEAFEVMNSMSGKG 250
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ P T++ +I CK+ Y+ A +M G P+ ++L+ + EA
Sbjct: 251 LKPTLFTYNAVINGLCKKGRYVRAKGVFNEMLSIGLSPDTTTYNTLLVESCRNNNFLEAK 310
Query: 121 SVYN 124
+++
Sbjct: 311 DIFS 314
Score = 50.1 bits (118), Expect = 3e-04, Method: Composition-based stats.
Identities = 28/107 (26%), Positives = 52/107 (48%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C+ G + L G K K D+V N ++ +C+T +ME + ++
Sbjct: 436 LIHGHCKEGNMGKALSLFGIMTQKNIKPDIVTYNILIDGFCKTTEMEKANELWNEMISRK 495
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLI 107
I P++ ++ IL+ +C A+R +M RKG +P C+++I
Sbjct: 496 IFPNHISYAILVNGYCNLGFVSEAFRLWDEMIRKGIKPTLVTCNTVI 542
Score = 47.4 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 27/99 (27%), Positives = 48/99 (48%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+++ +C G E +L + K K +V N+++ YCR+GD+ + K+
Sbjct: 506 LVNGYCNLGFVSEAFRLWDEMIRKGIKPTLVTCNTVIKGYCRSGDLSKADEFLGKMISEG 565
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPE 99
+ PD T++ LI F K + A+ + M KG QP+
Sbjct: 566 VGPDSITYNTLINGFVKGEYMDKAFFLINKMETKGLQPD 604
Score = 46.6 bits (109), Expect = 0.003, Method: Composition-based stats.
Identities = 27/107 (25%), Positives = 49/107 (45%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+A+CR G E ++ K K + N+++ C+ G V ++ +
Sbjct: 226 LINAYCREGLLGEAFEVMNSMSGKGLKPTLFTYNAVINGLCKKGRYVRAKGVFNEMLSIG 285
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLI 107
+SPD T++ L+ C+ ++ A DM +G P+ SSLI
Sbjct: 286 LSPDTTTYNTLLVESCRNNNFLEAKDIFSDMLHRGVSPDLISFSSLI 332
Score = 43.9 bits (102), Expect = 0.024, Method: Composition-based stats.
Identities = 21/107 (19%), Positives = 51/107 (47%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I +CRSG + + G ++ D + N+++ + + M+ ++ K++
Sbjct: 541 VIKGYCRSGDLSKADEFLGKMISEGVGPDSITYNTLINGFVKGEYMDKAFFLINKMETKG 600
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLI 107
+ PD T+++++ FC++ A + M +G P+ ++LI
Sbjct: 601 LQPDVVTYNVILNGFCRQGRMQEAELILRKMIERGIDPDRSTYTTLI 647
Score = 40.4 bits (93), Expect = 0.27, Method: Composition-based stats.
Identities = 26/96 (27%), Positives = 47/96 (48%)
Query: 29 DVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYMLAYRTM 88
+V LN M+ A C+ ++ V + +++ I D T++ LI +C+E + A+ M
Sbjct: 184 NVYTLNIMVNALCKDHKIDDVKPFLIDMEQKGIFADIVTYNTLINAYCREGLLGEAFEVM 243
Query: 89 VDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVYN 124
M KG +P +++I L K + A V+N
Sbjct: 244 NSMSGKGLKPTLFTYNAVINGLCKKGRYVRAKGVFN 279
Score = 40.4 bits (93), Expect = 0.28, Method: Composition-based stats.
Identities = 25/99 (25%), Positives = 44/99 (44%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ +CR+G E ++ + DVV N++L C+ + + ++ E
Sbjct: 366 LINGYCRNGMMSEALEIRDKMLEQGCALDVVAYNTILNGLCKKKLLADANALFDEMVERG 425
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPE 99
+ PD+ TF LI CKE A M +K +P+
Sbjct: 426 VVPDFCTFTTLIHGHCKEGNMGKALSLFGIMTQKNIKPD 464
Score = 36.6 bits (83), Expect = 4.0, Method: Composition-based stats.
Identities = 21/90 (23%), Positives = 38/90 (42%)
Query: 6 CRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDY 65
CR+ F E K + D + D++ +S++ R G ++ + R + + PD
Sbjct: 301 CRNNNFLEAKDIFSDMLHRGVSPDLISFSSLIGVSSRNGHLDQALMYFRDMKTSGLVPDN 360
Query: 66 NTFHILIKYFCKEKMYMLAYRTMVDMHRKG 95
+ ILI +C+ M A M +G
Sbjct: 361 VIYTILINGYCRNGMMSEALEIRDKMLEQG 390
Score = 36.2 bits (82), Expect = 4.9, Method: Composition-based stats.
Identities = 27/126 (21%), Positives = 55/126 (43%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I R+G ++ D + D V+ ++ YCR G M + + K+ E
Sbjct: 331 LIGVSSRNGHLDQALMYFRDMKTSGLVPDNVIYTILINGYCRNGMMSEALEIRDKMLEQG 390
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ D ++ ++ CK+K+ A +M +G P+ ++LI K +AL
Sbjct: 391 CALDVVAYNTILNGLCKKKLLADANALFDEMVERGVVPDFCTFTTLIHGHCKEGNMGKAL 450
Query: 121 SVYNML 126
S++ ++
Sbjct: 451 SLFGIM 456
>gi|357148528|ref|XP_003574800.1| PREDICTED: pentatricopeptide repeat-containing protein At5g18390,
mitochondrial-like [Brachypodium distachyon]
Length = 464
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/159 (20%), Positives = 68/159 (42%), Gaps = 2/159 (1%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ R+G EE K A F + DV NS+ A C GD++ + ++
Sbjct: 263 LVDGLVRAGRLEEAKAFAVRFTKEGVLPDVATFNSLAQALCDAGDVKFAVGLLADASSRG 322
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ PD +T+ +++ K A+R GH+P L ++++ L K +A
Sbjct: 323 LCPDISTYKVMLPAVAKAGQIEEAFRLFYAAVEDGHRPFPSLYAAIVKALCKAGRFGDAF 382
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLKDA--YIV 157
+ + ++ + ++ ++ + + G DA Y+V
Sbjct: 383 AFFGDMKSKGHPPNRPVYVMLVKMCVRGGRFLDAANYLV 421
Score = 40.4 bits (93), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 17/66 (25%), Positives = 31/66 (46%)
Query: 34 NSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHR 93
N++L A C G+ ++R++ ++PD TF L+ +C A + DM
Sbjct: 191 NALLDALCSNGNFAGAYKLLRRMARKGVAPDRATFSTLVDAWCASGKLREAQAFLDDMAS 250
Query: 94 KGHQPE 99
+G +P
Sbjct: 251 RGFRPP 256
>gi|357137687|ref|XP_003570431.1| PREDICTED: pentatricopeptide repeat-containing protein At5g14770,
mitochondrial-like [Brachypodium distachyon]
Length = 938
Score = 50.8 bits (120), Expect = 2e-04, Method: Composition-based stats.
Identities = 30/123 (24%), Positives = 60/123 (48%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ +C+ G E +A +A+ DVV NS++ CR G++++ ++ +
Sbjct: 180 LVDGYCKVGDMETAFAVAERMKAQGVGVDVVGYNSLVAGLCRAGEVDAARDMVDTMKRDG 239
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ P+ T+ + I +C+ A+ +M RKG P+ S+L+ L K SEA
Sbjct: 240 VEPNVVTYTMFIVEYCRRNAVDDAFSLYEEMVRKGVLPDVVTLSALVGGLCKDGRFSEAY 299
Query: 121 SVY 123
+++
Sbjct: 300 ALF 302
Score = 44.7 bits (104), Expect = 0.012, Method: Composition-based stats.
Identities = 31/101 (30%), Positives = 49/101 (48%), Gaps = 3/101 (2%)
Query: 29 DVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYMLAYRTM 88
DVV NS++ YC+ GDME+ V ++ + D ++ L+ C+ + A R M
Sbjct: 173 DVVGWNSLVDGYCKVGDMETAFAVAERMKAQGVGVDVVGYNSLVAGLCRAGE-VDAARDM 231
Query: 89 VD-MHRKGHQPEEELCSSLIFHLGKMRAHSEALSVY-NMLR 127
VD M R G +P + I + A +A S+Y M+R
Sbjct: 232 VDTMKRDGVEPNVVTYTMFIVEYCRRNAVDDAFSLYEEMVR 272
Score = 44.3 bits (103), Expect = 0.016, Method: Composition-based stats.
Identities = 26/122 (21%), Positives = 52/122 (42%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+++ CR+G + + + + + +VV + YCR ++ + ++
Sbjct: 215 LVAGLCRAGEVDAARDMVDTMKRDGVEPNVVTYTMFIVEYCRRNAVDDAFSLYEEMVRKG 274
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ PD T L+ CK+ + AY +M + G P LI L K + +E+L
Sbjct: 275 VLPDVVTLSALVGGLCKDGRFSEAYALFREMEKIGAAPNHVTYCMLIDTLAKAQRGNESL 334
Query: 121 SV 122
S+
Sbjct: 335 SL 336
Score = 38.9 bits (89), Expect = 0.80, Method: Composition-based stats.
Identities = 28/124 (22%), Positives = 53/124 (42%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ C+ G +E K + + + V ++ A C+ G+++ V+ +++E +
Sbjct: 355 LMDWLCKEGKIDEAKDMFRHALSDNHTPNGVTYTVLIDALCKAGNVDGAEQVLSEMEEKS 414
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
ISP+ TF +I K A M +M +G P ++I K AL
Sbjct: 415 ISPNVVTFSSIINGLVKRGWVGKATDYMREMKERGIDPNVVTYGTVIDGSFKCLGQEAAL 474
Query: 121 SVYN 124
VY+
Sbjct: 475 DVYH 478
>gi|225451367|ref|XP_002263590.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g09680 [Vitis vinifera]
gi|296087085|emb|CBI33459.3| unnamed protein product [Vitis vinifera]
Length = 592
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/100 (27%), Positives = 50/100 (50%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ C+ G E K+L + + K D ++ C+ GD+ES + + +++ +
Sbjct: 371 LINGLCKVGDLREAKKLVIEMTQRGLKPDKFTYTMLIDGCCKEGDLESALEIRKEMVKEG 430
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEE 100
I D F LI FC+E + A RT+ +M G +P++
Sbjct: 431 IELDNVAFTALISGFCREGQVIEAERTLREMLEAGIKPDD 470
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/103 (25%), Positives = 51/103 (49%)
Query: 5 FCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPD 64
C+ E + L G+ + + VV N+++ YC++G+++ + R + E + PD
Sbjct: 235 LCKEHKINEAQLLFGEIGKRGLRPTVVSFNTLINGYCKSGNLDQGFRLKRFMMENRVFPD 294
Query: 65 YNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLI 107
T+ +LI CKE A + ++M +G P + ++LI
Sbjct: 295 VFTYSVLINGLCKEGQLDDANKLFLEMCDRGLVPNDVTFTTLI 337
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/98 (23%), Positives = 46/98 (46%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C+ G E ++ + + + D V +++ +CR G + +R++ E
Sbjct: 406 LIDGCCKEGDLESALEIRKEMVKEGIELDNVAFTALISGFCREGQVIEAERTLREMLEAG 465
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQP 98
I PD T+ ++I FCK+ ++ + +M GH P
Sbjct: 466 IKPDDATYTMVIHGFCKKGDVKTGFKLLKEMQCDGHVP 503
Score = 40.0 bits (92), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 20/100 (20%), Positives = 50/100 (50%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ C+ G ++ +L + + + V +++ +C TG + M + +++
Sbjct: 301 LINGLCKEGQLDDANKLFLEMCDRGLVPNDVTFTTLINGHCVTGRADLGMEIYQQMLRKG 360
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEE 100
+ PD T++ LI CK A + +++M ++G +P++
Sbjct: 361 VKPDVITYNTLINGLCKVGDLREAKKLVIEMTQRGLKPDK 400
Score = 37.4 bits (85), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 24/107 (22%), Positives = 51/107 (47%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ C +G + ++ K K DV+ N+++ C+ GD+ ++ ++ +
Sbjct: 336 LINGHCVTGRADLGMEIYQQMLRKGVKPDVITYNTLINGLCKVGDLREAKKLVIEMTQRG 395
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLI 107
+ PD T+ +LI CKE A +M ++G + + ++LI
Sbjct: 396 LKPDKFTYTMLIDGCCKEGDLESALEIRKEMVKEGIELDNVAFTALI 442
Score = 37.4 bits (85), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 20/77 (25%), Positives = 38/77 (49%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I FC+ G + +L + + VV N +L C+ G M++ ++ + L
Sbjct: 476 VIHGFCKKGDVKTGFKLLKEMQCDGHVPGVVTYNVLLNGLCKQGQMKNANMLLDAMLNLG 535
Query: 61 ISPDYNTFHILIKYFCK 77
+ PD T++IL++ CK
Sbjct: 536 VVPDDITYNILLEGHCK 552
>gi|356555026|ref|XP_003545840.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g38730-like [Glycine max]
Length = 587
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/98 (26%), Positives = 45/98 (45%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ C+ G + +L + + + D + N+++ AYC+ GD++S + K+ E
Sbjct: 340 ILRKLCQDGRIRDANKLLNEMSERKLQADNITCNTLINAYCKIGDLKSALKFKNKMLEAG 399
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQP 98
+ PD T+ LI FCK A M M G P
Sbjct: 400 LKPDPFTYKALIHGFCKTNELESAKELMFSMLDAGFTP 437
Score = 41.2 bits (95), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 29/115 (25%), Positives = 54/115 (46%), Gaps = 16/115 (13%)
Query: 4 AFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISP 63
A +SG E +QL + + K D+ N++L YC+ G + + +++ I+
Sbjct: 205 ACSKSGDVERAEQLLNEMDVKGVLQDIFTYNTLLSLYCKKGMHYEALSIQNRMEREGINL 264
Query: 64 DYNTFHILIKYFCKE-------KMYM---------LAYRTMVDMHRKGHQPEEEL 102
D +++ LI FCKE +M+ + Y T++D + K ++ EE L
Sbjct: 265 DIVSYNSLIYGFCKEGRMREAMRMFSEIKNATPNHVTYTTLIDGYCKTNELEEAL 319
Score = 38.1 bits (87), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 21/107 (19%), Positives = 52/107 (48%), Gaps = 2/107 (1%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I FC+ G E ++ E K + V +++ YC+T ++E + + + ++
Sbjct: 272 LIYGFCKEGRMREAMRMFS--EIKNATPNHVTYTTLIDGYCKTNELEEALKMCKLMEAKG 329
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLI 107
+ P T++ +++ C++ A + + +M + Q + C++LI
Sbjct: 330 LYPGVVTYNSILRKLCQDGRIRDANKLLNEMSERKLQADNITCNTLI 376
Score = 36.6 bits (83), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 27/107 (25%), Positives = 47/107 (43%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I +C++ EE ++ EAK VV NS+L C+ G + ++ ++ E
Sbjct: 305 LIDGYCKTNELEEALKMCKLMEAKGLYPGVVTYNSILRKLCQDGRIRDANKLLNEMSERK 364
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLI 107
+ D T + LI +CK A + M G +P+ +LI
Sbjct: 365 LQADNITCNTLINAYCKIGDLKSALKFKNKMLEAGLKPDPFTYKALI 411
Score = 35.8 bits (81), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 24/102 (23%), Positives = 53/102 (51%), Gaps = 6/102 (5%)
Query: 29 DVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYMLAYRTM 88
++ + N + A ++GD+E ++ ++D + D T++ L+ +CK+ M+ A
Sbjct: 195 NIYIYNCLFHACSKSGDVERAEQLLNEMDVKGVLQDIFTYNTLLSLYCKKGMHYEALSIQ 254
Query: 89 VDMHRKGHQPEEELCSSLIFHL---GKMRAHSEALSVYNMLR 127
M R+G + +SLI+ G+MR EA+ +++ ++
Sbjct: 255 NRMEREGINLDIVSYNSLIYGFCKEGRMR---EAMRMFSEIK 293
>gi|413926774|gb|AFW66706.1| hypothetical protein ZEAMMB73_789977 [Zea mays]
Length = 642
Score = 50.8 bits (120), Expect = 2e-04, Method: Composition-based stats.
Identities = 29/107 (27%), Positives = 54/107 (50%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+ISA C+ G F+E K+ + K D V+ ++ + YC+ G + V+R +++
Sbjct: 520 LISALCKEGRFDEAKKKLLEMIVKDISPDSVIYDTFIHGYCKHGKTSLAIKVLRDMEKKG 579
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLI 107
+P T+++LI+ F ++ + M +M KG P +SLI
Sbjct: 580 CNPSTRTYNLLIRGFEEKHKSDEIMKLMSEMEEKGVSPNVLTYNSLI 626
Score = 41.6 bits (96), Expect = 0.11, Method: Composition-based stats.
Identities = 25/99 (25%), Positives = 47/99 (47%), Gaps = 5/99 (5%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDEL- 59
+++ FC+ G EE ++L + +VV NS + A C+ G + + + + E
Sbjct: 213 VVAGFCKEGLVEEAERLVERMRVQGLAPNVVTFNSRISALCKAGRVLDAYRIFKDMQEDW 272
Query: 60 ---AISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKG 95
PD TF +++ FC + ++ R +VD+ R G
Sbjct: 273 QHGLPRPDQVTFDVMLSGFC-DAGFVDEARVLVDIMRCG 310
Score = 41.2 bits (95), Expect = 0.13, Method: Composition-based stats.
Identities = 22/107 (20%), Positives = 52/107 (48%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++S C+ G + +++ + DVV S+L AYC G++ + ++ ++ +
Sbjct: 357 IVSGLCKEGKAFDARRVENFIRSGVMSPDVVTYTSLLHAYCSKGNIAAANRILDEMAQKG 416
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLI 107
+P+ T+++L++ + A R + M KG+ + C+ +I
Sbjct: 417 CAPNSFTYNVLLQSLWRAGRTTEAERLLERMSEKGYSLDTAGCNIII 463
Score = 37.4 bits (85), Expect = 1.9, Method: Composition-based stats.
Identities = 22/90 (24%), Positives = 43/90 (47%), Gaps = 6/90 (6%)
Query: 4 AFCRSG-CFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAIS 62
+CR+G + K L G ++V+ N+++ +C+ G +E ++ ++ ++
Sbjct: 185 GYCRAGRSVDALKVLDG-----MPSMNLVVCNTVVAGFCKEGLVEEAERLVERMRVQGLA 239
Query: 63 PDYNTFHILIKYFCKEKMYMLAYRTMVDMH 92
P+ TF+ I CK + AYR DM
Sbjct: 240 PNVVTFNSRISALCKAGRVLDAYRIFKDMQ 269
Score = 36.6 bits (83), Expect = 4.0, Method: Composition-based stats.
Identities = 22/83 (26%), Positives = 38/83 (45%), Gaps = 10/83 (12%)
Query: 1 MISAFCRSGCFEETKQLA-----GDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRK 55
M+S FC +G +E + L G F + + Y N L R G + ++R+
Sbjct: 287 MLSGFCDAGFVDEARVLVDIMRCGGFLRRVESY-----NRWLSGLVRNGRVGEAHELLRE 341
Query: 56 LDELAISPDYNTFHILIKYFCKE 78
+ I P+ T++I++ CKE
Sbjct: 342 MAHERIHPNSYTYNIIVSGLCKE 364
Score = 35.4 bits (80), Expect = 7.5, Method: Composition-based stats.
Identities = 20/79 (25%), Positives = 35/79 (44%)
Query: 29 DVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYMLAYRTM 88
D + + ++ A C+ G + + ++ ISPD + I +CK LA + +
Sbjct: 513 DRITYSILISALCKEGRFDEAKKKLLEMIVKDISPDSVIYDTFIHGYCKHGKTSLAIKVL 572
Query: 89 VDMHRKGHQPEEELCSSLI 107
DM +KG P + LI
Sbjct: 573 RDMEKKGCNPSTRTYNLLI 591
>gi|224125420|ref|XP_002329801.1| predicted protein [Populus trichocarpa]
gi|222870863|gb|EEF07994.1| predicted protein [Populus trichocarpa]
Length = 478
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/143 (25%), Positives = 67/143 (46%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ C+ G E K+L + + K VV + ++ C+ G+++ M + K+ + A
Sbjct: 197 LINGLCKLGKTFEAKELFKEMDTKGCSPSVVTYSCLMHGLCQAGNVDEAMGLFDKMKKKA 256
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
I P+ T+ L+ CK + A + M RK H+P S+LI L K +EA+
Sbjct: 257 IEPNVFTYSSLMDGLCKNGGSLEAMELLEMMVRKRHKPNMVTYSTLINGLCKEGKLAEAV 316
Query: 121 SVYNMLRYSKRSMCKALHEKILH 143
+ ++ L+ KI++
Sbjct: 317 ETLDRMKLQGLKPDAGLYGKIIN 339
Score = 43.9 bits (102), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 32/151 (21%), Positives = 66/151 (43%), Gaps = 3/151 (1%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ C++G +E L + K + +V +S++ C+ G M ++ +
Sbjct: 232 LMHGLCQAGNVDEAMGLFDKMKKKAIEPNVFTYSSLMDGLCKNGGSLEAMELLEMMVRKR 291
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
P+ T+ LI CKE A T+ M +G +P+ L +I +R EA
Sbjct: 292 HKPNMVTYSTLINGLCKEGKLAEAVETLDRMKLQGLKPDAGLYGKIINGFCNIRKFQEAA 351
Query: 121 SVYNML---RYSKRSMCKALHEKILHILISG 148
+ + + + S + +LH K+ ++++ G
Sbjct: 352 TYLDEMVLGQISPNRVTWSLHVKLNNMVVQG 382
Score = 38.1 bits (87), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 25/102 (24%), Positives = 47/102 (46%), Gaps = 1/102 (0%)
Query: 27 KYDVVLLNSMLCAYCR-TGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYMLAY 85
+ VV LN ++ A C+ +G +++ + R++ + PD T+ LI CK A
Sbjct: 152 RQSVVSLNVLIKALCKNSGTIDAAFEIFREMPKRGCDPDSYTYGTLINGLCKLGKTFEAK 211
Query: 86 RTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVYNMLR 127
+M KG P S L+ L + EA+ +++ ++
Sbjct: 212 ELFKEMDTKGCSPSVVTYSCLMHGLCQAGNVDEAMGLFDKMK 253
>gi|413939576|gb|AFW74127.1| hypothetical protein ZEAMMB73_460696 [Zea mays]
Length = 581
Score = 50.8 bits (120), Expect = 2e-04, Method: Composition-based stats.
Identities = 37/154 (24%), Positives = 66/154 (42%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ C G +E +L + + + + D V N+++ AYC+ GDM S V +K+ E
Sbjct: 324 ILRKLCEDGNMKEVHRLLHEMDGRKVQADHVTCNTLINAYCKRGDMTSACKVKKKMMESG 383
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ ++ T+ LI FCK + A M G P + S L+ K L
Sbjct: 384 LQLNHFTYKALIHGFCKARELDGAKEAFFQMVDAGFSPNYSVFSWLVDGFCKKNNADAVL 443
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLKDA 154
++ + L KA++ ++ L L+ A
Sbjct: 444 AIPDELMKRGLPPDKAVYRSLIRRLCRKGLVDQA 477
Score = 48.1 bits (113), Expect = 0.001, Method: Composition-based stats.
Identities = 32/114 (28%), Positives = 50/114 (43%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I +CR+G EE +L G EA V N++L C G+M+ V ++ ++D
Sbjct: 289 LIDGYCRAGNVEEAVKLRGRMEAAGMLPGVATYNAILRKLCEDGNMKEVHRLLHEMDGRK 348
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMR 114
+ D+ T + LI +CK A + M G Q +LI K R
Sbjct: 349 VQADHVTCNTLINAYCKRGDMTSACKVKKKMMESGLQLNHFTYKALIHGFCKAR 402
Score = 45.4 bits (106), Expect = 0.007, Method: Composition-based stats.
Identities = 23/106 (21%), Positives = 51/106 (48%)
Query: 2 ISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAI 61
I C+ G +E QL + A D V +++ YCR G++E + + +++ +
Sbjct: 255 IHGLCKEGRVKEAAQLFTEMVAAQATPDNVTYTTLIDGYCRAGNVEEAVKLRGRMEAAGM 314
Query: 62 SPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLI 107
P T++ +++ C++ +R + +M + Q + C++LI
Sbjct: 315 LPGVATYNAILRKLCEDGNMKEVHRLLHEMDGRKVQADHVTCNTLI 360
>gi|356497996|ref|XP_003517841.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Glycine max]
Length = 600
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 49/99 (49%)
Query: 29 DVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYMLAYRTM 88
++V S++ +C T +M M+ + ++ + P+ T+ LI CK + A
Sbjct: 362 NIVTYTSLIHGWCETKNMNKAMYFLGEMVNNGLDPNVVTWSTLIGGVCKAGKPVAAKELF 421
Query: 89 VDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVYNMLR 127
+ MH+ G P + C+ ++ L K HSEA+S++ L
Sbjct: 422 LVMHKHGQLPNLQTCAIILDGLFKCNFHSEAMSLFRELE 460
Score = 38.1 bits (87), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 26/120 (21%), Positives = 53/120 (44%), Gaps = 1/120 (0%)
Query: 4 AFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISP 63
C SG + +L +K K DVV N M+ C+ G ++ ++ K++E P
Sbjct: 477 GMCSSGKLNDALELFSYLSSKGVKIDVVTYNIMIKGLCKEGLLDDAEDLLMKMEENGCPP 536
Query: 64 DYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVY 123
+ T+++ ++ + + + ++ M KG Q + LI + + + AL V+
Sbjct: 537 NECTYNVFVQGLLRRYQISKSTKYLMFMKDKGFQADATTTKFLINYFSANK-ENRALEVF 595
Score = 35.8 bits (81), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 23/105 (21%), Positives = 46/105 (43%)
Query: 22 EAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMY 81
E K DV + ++ C+ G + +++ ++ I PD T++ LI C +
Sbjct: 215 EEKNCNLDVTAYSGVVDGLCKDGMVFEALNLFSQMTGKGIQPDLFTYNCLIHGLCNFDRW 274
Query: 82 MLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVYNML 126
A + +M RKG P+ + + + K S A S+++ +
Sbjct: 275 KEAAPLLANMMRKGIMPDVQTFNVIAGRFFKTGMISRAKSIFSFM 319
>gi|297844618|ref|XP_002890190.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297336032|gb|EFH66449.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 741
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/125 (23%), Positives = 59/125 (47%)
Query: 6 CRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDY 65
CR+GC E Q+ G V + + ++ + R+G+ + + + K+ +++ P+
Sbjct: 356 CRTGCVAEAFQVVGLMICSGISVSVNVWSMLVSGFFRSGEPQKAVDLFNKMIQISCFPNL 415
Query: 66 NTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVYNM 125
T+ LIK F M A+ + + +G P+ LC+ +I ++ EA +V+
Sbjct: 416 VTYTSLIKGFVDLGMVEEAFTVLSKVQSEGLAPDIVLCNLMIHTFTRLGRFEEARNVFTS 475
Query: 126 LRYSK 130
L+ K
Sbjct: 476 LKKRK 480
>gi|168038876|ref|XP_001771925.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162676707|gb|EDQ63186.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 831
Score = 50.8 bits (120), Expect = 2e-04, Method: Composition-based stats.
Identities = 33/147 (22%), Positives = 68/147 (46%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ A C++G + T + + A + + N +L + + GDM +M+K+
Sbjct: 586 LLKACCKAGRMQSTLAITAEMAAAGVPMNNYIYNILLDGWAQRGDMWEASDIMQKMRHEG 645
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
++PD +++ I CK + A T+ M ++G QP + ++LI +AL
Sbjct: 646 LTPDIHSYTSFINACCKAGDMLKATETIEQMKQQGVQPNLQAYTTLIHGWASASYPEKAL 705
Query: 121 SVYNMLRYSKRSMCKALHEKILHILIS 147
Y+ ++ + K L+ I+ L+S
Sbjct: 706 ICYDEMKSAGMIPDKPLYHCIMTSLLS 732
Score = 40.4 bits (93), Expect = 0.24, Method: Composition-based stats.
Identities = 22/96 (22%), Positives = 44/96 (45%)
Query: 27 KYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYMLAYR 86
K D + N ++ A+C+ G M + ++ +++ P T+ I+I F K +A+
Sbjct: 437 KPDGITYNILMNAFCKNGQMNRALELLARMESGDCPPTLRTYTIIIDGFMKIGDLRMAFE 496
Query: 87 TMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSV 122
T+ DM G +P + ++ L + A S+
Sbjct: 497 TVRDMKMAGFRPSAATYNVIMHGLAQAGQMDRAASI 532
Score = 37.4 bits (85), Expect = 1.9, Method: Composition-based stats.
Identities = 33/161 (20%), Positives = 69/161 (42%), Gaps = 7/161 (4%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ + + G ++ Q++ + E + K++ + ++ Y + GD + V +
Sbjct: 376 LINLYSKLGKMDKALQISNEMEDQGIKHNRKTYSMIIDGYVQLGDTANAFSVFEDMSNAG 435
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLI---FHLGKMRAHS 117
I PD T++IL+ FCK A + M P + +I +G +R
Sbjct: 436 IKPDGITYNILMNAFCKNGQMNRALELLARMESGDCPPTLRTYTIIIDGFMKIGDLRMAF 495
Query: 118 EALSVYNMLRYSKRSMCKALHEKILHILI-SGKLLKDAYIV 157
E + M + + A + I+H L +G++ + A I+
Sbjct: 496 ETVRDMKMAGFRPSA---ATYNVIMHGLAQAGQMDRAASII 533
>gi|242033891|ref|XP_002464340.1| hypothetical protein SORBIDRAFT_01g016560 [Sorghum bicolor]
gi|241918194|gb|EER91338.1| hypothetical protein SORBIDRAFT_01g016560 [Sorghum bicolor]
Length = 758
Score = 50.8 bits (120), Expect = 2e-04, Method: Composition-based stats.
Identities = 34/124 (27%), Positives = 54/124 (43%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ ++G +E K + + D N+++ A +E + + R+L
Sbjct: 343 VINCLSKNGELDEAKGIVNQMVDRGCLPDTTTFNTLIVALSSQNRLEEALDLARELTVKG 402
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+SPD TF+ILI CK L R +M G P+E + LI HL M AL
Sbjct: 403 LSPDVYTFNILINALCKVGDPHLGIRLFEEMKSSGCTPDEVTYNILIDHLCSMGKLGNAL 462
Query: 121 SVYN 124
+ N
Sbjct: 463 DLLN 466
Score = 42.4 bits (98), Expect = 0.064, Method: Composition-based stats.
Identities = 26/92 (28%), Positives = 43/92 (46%)
Query: 29 DVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYMLAYRTM 88
DVV LN+++ A CR + + + ++ ++ ++PD TF L++ F +E A R
Sbjct: 196 DVVTLNTLIKALCRAHQVRTAVLMLEEMSSHGVAPDETTFTTLMQGFIEEGSIEAALRVK 255
Query: 89 VDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
M G P + LI KM +AL
Sbjct: 256 AKMMEAGCSPTGVTVNVLINGYCKMGRVEDAL 287
Score = 40.4 bits (93), Expect = 0.22, Method: Composition-based stats.
Identities = 29/112 (25%), Positives = 46/112 (41%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C G L + E+ V N+++ A C+ +E V ++D
Sbjct: 448 LIDHLCSMGKLGNALDLLNEMESNGCPRSTVTYNTIIDALCKKMRIEEAEEVFDQMDAQG 507
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGK 112
IS TF+ LI CK K A + M ++G QP +S++ H K
Sbjct: 508 ISRSAVTFNTLIDGLCKAKRIDDATELIEQMVKEGLQPNNITYNSILTHYCK 559
Score = 39.3 bits (90), Expect = 0.50, Method: Composition-based stats.
Identities = 35/154 (22%), Positives = 59/154 (38%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I A EE LA + K DV N ++ A C+ GD + + ++
Sbjct: 378 LIVALSSQNRLEEALDLARELTVKGLSPDVYTFNILINALCKVGDPHLGIRLFEEMKSSG 437
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+PD T++ILI + C A + +M G +++I L K EA
Sbjct: 438 CTPDEVTYNILIDHLCSMGKLGNALDLLNEMESNGCPRSTVTYNTIIDALCKKMRIEEAE 497
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLKDA 154
V++ + S ++ L K + DA
Sbjct: 498 EVFDQMDAQGISRSAVTFNTLIDGLCKAKRIDDA 531
Score = 38.5 bits (88), Expect = 0.89, Method: Composition-based stats.
Identities = 24/123 (19%), Positives = 55/123 (44%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C++ ++ +L + + + + NS+L YC+ G+++ ++ +
Sbjct: 518 LIDGLCKAKRIDDATELIEQMVKEGLQPNNITYNSILTHYCKQGNIKKAADILETMTANG 577
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
D T+ LI CK +A + + M KG +P + + +I L + +AL
Sbjct: 578 FEIDVVTYGTLINGLCKAGRTQVALKLLRGMRIKGIRPTPKAYNPVIQSLFRRNNLRDAL 637
Query: 121 SVY 123
+++
Sbjct: 638 NLF 640
Score = 37.0 bits (84), Expect = 2.5, Method: Composition-based stats.
Identities = 22/96 (22%), Positives = 44/96 (45%)
Query: 31 VLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYMLAYRTMVD 90
V +N ++ YC+ G +E + +++ PD T++ + C+ A + M
Sbjct: 268 VTVNVLINGYCKMGRVEDALGYIQQEIADGFEPDQVTYNTFVHGLCQNGHVSHALKVMDL 327
Query: 91 MHRKGHQPEEELCSSLIFHLGKMRAHSEALSVYNML 126
M ++GH P+ +++I L K EA + N +
Sbjct: 328 MLQEGHDPDVFTYNTVINCLSKNGELDEAKGIVNQM 363
Score = 35.4 bits (80), Expect = 7.8, Method: Composition-based stats.
Identities = 27/154 (17%), Positives = 64/154 (41%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I A C+ EE +++ +A+ V N+++ C+ ++ ++ ++ +
Sbjct: 483 IIDALCKKMRIEEAEEVFDQMDAQGISRSAVTFNTLIDGLCKAKRIDDATELIEQMVKEG 542
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ P+ T++ ++ ++CK+ A + M G + + +LI L K AL
Sbjct: 543 LQPNNITYNSILTHYCKQGNIKKAADILETMTANGFEIDVVTYGTLINGLCKAGRTQVAL 602
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLKDA 154
+ +R + ++ L L+DA
Sbjct: 603 KLLRGMRIKGIRPTPKAYNPVIQSLFRRNNLRDA 636
>gi|18071404|gb|AAL58263.1|AC068923_5 putative membrane-associated protein [Oryza sativa Japonica Group]
Length = 1219
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/152 (24%), Positives = 70/152 (46%), Gaps = 5/152 (3%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I +C +G +E +L + K D V N+++ YC+ ME + + R+++
Sbjct: 520 LIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSG 579
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+SPD T++I+++ + + A V + G Q E + ++ L K EAL
Sbjct: 580 VSPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQLELSTYNIILHGLCKNNLTDEAL 639
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLK 152
++ L + L + +I+I G LLK
Sbjct: 640 RMFQNLCLTDLQ----LETRTFNIMI-GALLK 666
Score = 41.2 bits (95), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 18/66 (27%), Positives = 34/66 (51%)
Query: 34 NSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHR 93
NS++ YC +G + + ++K+ + PD T++ L+ Y CK A + M +
Sbjct: 273 NSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTK 332
Query: 94 KGHQPE 99
+G +PE
Sbjct: 333 RGLKPE 338
Score = 40.8 bits (94), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 33/154 (21%), Positives = 67/154 (43%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I + C+ G E+++L K D++ ++++ YC G M+ ++ + +
Sbjct: 485 IIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVG 544
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ PD T++ LI +CK A +M G P+ + ++ L + R + A
Sbjct: 545 MKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAK 604
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLKDA 154
+Y + S + + + ILH L L +A
Sbjct: 605 ELYVGITESGTQLELSTYNIILHGLCKNNLTDEA 638
Score = 39.7 bits (91), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 31/136 (22%), Positives = 63/136 (46%), Gaps = 17/136 (12%)
Query: 8 SGCFEETKQLAGDFEAKYDKY----------DVVLLNSMLCAYCRTGDMESVMHVMRKLD 57
+G F+E GD + Y Y +VV +S++ A C+ M+ M V+ +
Sbjct: 207 NGFFKE-----GDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMV 261
Query: 58 ELAISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHS 117
+ + P+ T++ ++ +C A + MH G +P+ +SL+ +L K +
Sbjct: 262 KNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCT 321
Query: 118 EALSVYNMLRYSKRSM 133
EA +++ + +KR +
Sbjct: 322 EARKMFDSM--TKRGL 335
Score = 37.0 bits (84), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 21/75 (28%), Positives = 35/75 (46%)
Query: 36 MLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKG 95
++CAY + G ++ M V K+ + ++PD T+ +I CK A R M +
Sbjct: 380 LICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDER 439
Query: 96 HQPEEELCSSLIFHL 110
P + +SLI L
Sbjct: 440 LSPGNIVYNSLIHSL 454
Score = 35.4 bits (80), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 29/154 (18%), Positives = 63/154 (40%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ +C SG +E + + DVV NS++ C+ G + + +
Sbjct: 275 IVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRG 334
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ P+ T+ L++ + + + + + M R G P + S LI K +A+
Sbjct: 335 LKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAM 394
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLKDA 154
V++ +R + + ++ IL ++DA
Sbjct: 395 LVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDA 428
>gi|452823354|gb|EME30365.1| mitochondrial protein translocase, MPT family [Galdieria
sulphuraria]
Length = 683
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/136 (27%), Positives = 63/136 (46%), Gaps = 7/136 (5%)
Query: 2 ISAFCR-SGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+S FC+ EE+ QL + + D + N +L R D E + ++L
Sbjct: 382 LSVFCKMKTAIEESFQLLKWAKENGIEPDTISYNILLDHAFRLRDWERGEKIFKELQTQG 441
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSL--IFHLGKMRAHSE 118
+ PD T++ LI+ + Y T +M+++ P E+ CSSL +FH+ A
Sbjct: 442 LKPDATTYNYLIRAYSNSNQYAKVVATFKEMNKRNFIPNEQSCSSLVRVFHIQGNDA--A 499
Query: 119 ALSVYNMLR--YSKRS 132
AL V N++ YS R+
Sbjct: 500 ALQVLNLMERHYSPRN 515
Score = 35.4 bits (80), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 27/120 (22%), Positives = 54/120 (45%), Gaps = 2/120 (1%)
Query: 27 KYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYMLAYR 86
K + LN + C +GD + ++ L+ + PD +T+H +I+ K LA
Sbjct: 13 KKSISKLNKEISRLCDSGDFLVAVKILEGLEVSNVQPDSSTYHCMIRSLTKRGEEKLARH 72
Query: 87 TMVDMHRKGHQPEEELCSSLI--FHLGKMRAHSEALSVYNMLRYSKRSMCKALHEKILHI 144
+ M KG P E + L+ + + RA +A S++ ++ + + + +LH+
Sbjct: 73 CLTLMLEKGLLPCTESVNLLMKQYFIQSPRALEKASSLFRRMKELQVPLDAYTYNSLLHV 132
>gi|242095042|ref|XP_002438011.1| hypothetical protein SORBIDRAFT_10g006490 [Sorghum bicolor]
gi|241916234|gb|EER89378.1| hypothetical protein SORBIDRAFT_10g006490 [Sorghum bicolor]
Length = 1443
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/144 (20%), Positives = 65/144 (45%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
M S C F + + + + E K D+ + NS+L Y G+ + V + + E
Sbjct: 891 MTSLLCHHNRFRDVELMIAEMEGAGFKPDLSIFNSLLNMYTAAGNFDRTTQVYQSILEAG 950
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ PD +T++ LI +C+ + + +M ++G P+ + SL+ K +A
Sbjct: 951 LEPDEDTYNTLIVMYCRSLRPEEGFTLLNEMGKRGLTPKLQSYKSLLAASAKAELREQAD 1010
Query: 121 SVYNMLRYSKRSMCKALHEKILHI 144
++ +R + ++++ ++ I
Sbjct: 1011 QLFEEMRSKSYQLNRSIYHMMMKI 1034
Score = 45.4 bits (106), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 35/122 (28%), Positives = 57/122 (46%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
M+S R G EE ++L G+ K D V NS+L A+ + G+++ V H +L +
Sbjct: 334 MVSVHGRCGKAEEAERLFGELVEKGFMPDAVTYNSLLYAFAKEGNVDKVEHTCEELVKAG 393
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ T++ +I + K LA +M G P+ + +I LGKM +EA
Sbjct: 394 FKKNEITYNTMIHMYGKMGRLDLAVGLYDEMRAVGCTPDAVTYTVMIDSLGKMDKIAEAG 453
Query: 121 SV 122
V
Sbjct: 454 KV 455
Score = 37.4 bits (85), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 31/127 (24%), Positives = 57/127 (44%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+ISA +S E+ + + A + D+ N+M+ + R G E + +L E
Sbjct: 299 LISACSQSSNLEDAVTVFEEMIASECRPDLWTYNAMVSVHGRCGKAEEAERLFGELVEKG 358
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
PD T++ L+ F KE T ++ + G + E +++I GKM A+
Sbjct: 359 FMPDAVTYNSLLYAFAKEGNVDKVEHTCEELVKAGFKKNEITYNTMIHMYGKMGRLDLAV 418
Query: 121 SVYNMLR 127
+Y+ +R
Sbjct: 419 GLYDEMR 425
Score = 35.8 bits (81), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 25/114 (21%), Positives = 52/114 (45%), Gaps = 2/114 (1%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYD--KYDVVLLNSMLCAYCRTGDMESVMHVMRKLDE 58
+I+A +SGC L FE + + DV+ N+++ A ++ ++E + V ++
Sbjct: 262 LINARSKSGCLAAGVALDLLFEVRQSGLRPDVITYNTLISACSQSSNLEDAVTVFEEMIA 321
Query: 59 LAISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGK 112
PD T++ ++ + A R ++ KG P+ +SL++ K
Sbjct: 322 SECRPDLWTYNAMVSVHGRCGKAEEAERLFGELVEKGFMPDAVTYNSLLYAFAK 375
>gi|222612706|gb|EEE50838.1| hypothetical protein OsJ_31258 [Oryza sativa Japonica Group]
Length = 897
Score = 50.8 bits (120), Expect = 2e-04, Method: Composition-based stats.
Identities = 44/164 (26%), Positives = 79/164 (48%), Gaps = 12/164 (7%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I A R G +++ +LA + DVV N ++ A C+ G+++ + ++ ++ E
Sbjct: 476 IIHALLRDGRWQDAVRLAKEMILHGCSLDVVSYNGLIKAMCKDGNVDRSLVLLEEMAEKG 535
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
I P+ +++ILI CKE+ A M +G P+ ++LI L KM AL
Sbjct: 536 IKPNNVSYNILISELCKERRVRDALELSKQMLNQGLAPDIVTYNTLINGLCKMGWMHAAL 595
Query: 121 SVYNMLRYSKRSMCKALHEKIL--HILISG----KLLKDAYIVV 158
++ L +H I+ +ILIS +LL DA +++
Sbjct: 596 NLLEKLHNEN------VHPDIITYNILISWHCKVRLLDDAAMLL 633
Score = 37.7 bits (86), Expect = 1.6, Method: Composition-based stats.
Identities = 30/145 (20%), Positives = 62/145 (42%), Gaps = 3/145 (2%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I A C+ G + + L + K K + V N ++ C+ + + + +++
Sbjct: 511 LIKAMCKDGNVDRSLVLLEEMAEKGIKPNNVSYNILISELCKERRVRDALELSKQMLNQG 570
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
++PD T++ LI CK A + +H + P+ + LI K+R +A
Sbjct: 571 LAPDIVTYNTLINGLCKMGWMHAALNLLEKLHNENVHPDIITYNILISWHCKVRLLDDAA 630
Query: 121 SVYNMLRYSKRSMCKALHEKILHIL 145
+ N + ++C +I+ IL
Sbjct: 631 MLLNR---AMAAVCPVGDRRIMQIL 652
Score = 36.6 bits (83), Expect = 3.4, Method: Composition-based stats.
Identities = 22/98 (22%), Positives = 42/98 (42%), Gaps = 4/98 (4%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ CR +E + + G + + +VVL N+++ G + + +
Sbjct: 270 LLQGLCRVRQADEARAMLG----RVPELNVVLFNTVIGGCLAEGKLAEATELYETMGLKG 325
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQP 98
PD +T+ IL+ CK A R + +M +KG P
Sbjct: 326 CQPDAHTYSILMHGLCKLGRIGSAVRLLREMEKKGFAP 363
Score = 35.0 bits (79), Expect = 9.9, Method: Composition-based stats.
Identities = 31/161 (19%), Positives = 68/161 (42%), Gaps = 4/161 (2%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ C+ G +L + E K +VV +L ++C+ G + ++ ++
Sbjct: 336 LMHGLCKLGRIGSAVRLLREMEKKGFAPNVVTYTIVLHSFCKNGMWDDTRALLEEMSAKG 395
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCS--SLIFHLGKMRAHSE 118
++ + ++ +I CK+ A + +M +G P ++CS ++I+HL E
Sbjct: 396 LTLNSQGYNGMIYALCKDGRMDEAMGLIQEMRSQGCNP--DICSYNTIIYHLCNNEQMEE 453
Query: 119 ALSVYNMLRYSKRSMCKALHEKILHILISGKLLKDAYIVVK 159
A ++ L + I+H L+ +DA + K
Sbjct: 454 AEHMFENLLEEGVVANGITYNTIIHALLRDGRWQDAVRLAK 494
>gi|326528431|dbj|BAJ93404.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 332
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/144 (23%), Positives = 68/144 (47%), Gaps = 6/144 (4%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
M+ + C++G E +L G K DVV+ +++ A+C+ ++ + + RK+
Sbjct: 167 MLDSLCKNGLVPEAMKLFGLMREKGAIPDVVIYTAVVEAFCKGAKLDDAVRIFRKMQGNG 226
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ P+ ++ ++I+ CK A V+M GH P L+ + KM+ E
Sbjct: 227 VIPNAFSYWLIIQGLCKGDRLDEAVAFCVEMFEAGHSPNAATFVGLVDAVCKMKGVEEG- 285
Query: 121 SVYNMLR-YSKRSMCKALHEKILH 143
N++R + +R+ A+ EK +
Sbjct: 286 --ENLVRSFQERNF--AIDEKSIR 305
>gi|302770855|ref|XP_002968846.1| hypothetical protein SELMODRAFT_90583 [Selaginella moellendorffii]
gi|300163351|gb|EFJ29962.1| hypothetical protein SELMODRAFT_90583 [Selaginella moellendorffii]
Length = 538
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/153 (22%), Positives = 66/153 (43%)
Query: 2 ISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAI 61
+ A C++G + ++ + DVV + ++ + R G ++ + ++ + +
Sbjct: 271 LDALCKAGYLDRARKSVEELRQSGVVPDVVTYSMLINTFARAGQFDASLELLEDMRRNGV 330
Query: 62 SPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEALS 121
PD T+ LI CKE+ + A+R + M G P +S++ L K E
Sbjct: 331 KPDVVTYSTLINVLCKERKFQDAFRLLELMEAAGSPPNVVTYNSVMDGLCKSGKMDEVHR 390
Query: 122 VYNMLRYSKRSMCKALHEKILHILISGKLLKDA 154
VY M+ S+ S + I++ L +L A
Sbjct: 391 VYEMMLKSRCSPDVVTYSIIMNGLSKAGMLDSA 423
Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 30/122 (24%), Positives = 52/122 (42%), Gaps = 1/122 (0%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ C +G + +L + Y + + N ++ CR + V+ K+ E +
Sbjct: 60 VVDGLCGAGMANQALELVRELSGVYTPT-LFIYNGIITGLCRASRVMDAYKVLEKMVEES 118
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
I P+ T+ IL+ C+ LA +M R G +P +LI HL + EAL
Sbjct: 119 IVPNVFTYTILLNGLCRSNKTKLAREVFQEMKRNGCKPNPITYGTLIQHLSRAGEIDEAL 178
Query: 121 SV 122
V
Sbjct: 179 RV 180
Score = 40.4 bits (93), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 35/141 (24%), Positives = 66/141 (46%), Gaps = 6/141 (4%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ C+ F++ +L EA +VV NS++ C++G M+ V V + +
Sbjct: 340 LINVLCKERKFQDAFRLLELMEAAGSPPNVVTYNSVMDGLCKSGKMDEVHRVYEMMLKSR 399
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYR--TMVDMHRKGHQPEEELCSSLIFHLGKMRAHSE 118
SPD T+ I++ K M A + ++ R+G P+ S +I L + E
Sbjct: 400 CSPDVVTYSIIMNGLSKAGMLDSAVKLFELIKSSREG--PDAAAYSMVITSLCRAGKLEE 457
Query: 119 ALSVYNMLRYS--KRSMCKAL 137
A +Y+ + + ++C+AL
Sbjct: 458 ACGMYHGMEVTVAGDNICRAL 478
Score = 37.0 bits (84), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 28/154 (18%), Positives = 66/154 (42%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ F R+G F+ + +L D K DVV ++++ C+ + ++ ++
Sbjct: 305 LINTFARAGQFDASLELLEDMRRNGVKPDVVTYSTLINVLCKERKFQDAFRLLELMEAAG 364
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
P+ T++ ++ CK +R M + P+ S ++ L K A+
Sbjct: 365 SPPNVVTYNSVMDGLCKSGKMDEVHRVYEMMLKSRCSPDVVTYSIIMNGLSKAGMLDSAV 424
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLKDA 154
++ +++ S+ A + ++ L L++A
Sbjct: 425 KLFELIKSSREGPDAAAYSMVITSLCRAGKLEEA 458
>gi|413942671|gb|AFW75320.1| hypothetical protein ZEAMMB73_530230 [Zea mays]
Length = 542
Score = 50.8 bits (120), Expect = 2e-04, Method: Composition-based stats.
Identities = 24/107 (22%), Positives = 51/107 (47%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+++A+C G E +QL D A + D + ++ YC ++ +M ++
Sbjct: 241 VLTAYCAKGDLEGAQQLFDDIIASGRRPDATMYTVLIDGYCHHRKLQDAARIMDEMGAAG 300
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLI 107
+ P+ T+ ++I+ CKE+ A +M G+ P+ LC+ ++
Sbjct: 301 VQPNEVTYSVVIEACCKERKSTEARDLTREMLGAGYVPDTPLCAKVV 347
Score = 49.3 bits (116), Expect = 5e-04, Method: Composition-based stats.
Identities = 29/91 (31%), Positives = 41/91 (45%)
Query: 29 DVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYMLAYRTM 88
DVV ++L AYC GD+E + + PD + +LI +C + A R M
Sbjct: 234 DVVTYTTVLTAYCAKGDLEGAQQLFDDIIASGRRPDATMYTVLIDGYCHHRKLQDAARIM 293
Query: 89 VDMHRKGHQPEEELCSSLIFHLGKMRAHSEA 119
+M G QP E S +I K R +EA
Sbjct: 294 DEMGAAGVQPNEVTYSVVIEACCKERKSTEA 324
Score = 45.4 bits (106), Expect = 0.009, Method: Composition-based stats.
Identities = 28/112 (25%), Positives = 50/112 (44%), Gaps = 1/112 (0%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C+ G +E ++L + E + ++ NS++ C G+++ V + E
Sbjct: 381 LIYWLCKKGMVQEARKLFDELERGFLP-SLLTYNSLIIGLCENGELQEAGRVWDDMVERR 439
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGK 112
P+ T+ LIK FCK Y +M +G P + L +L+ L K
Sbjct: 440 YEPNAMTYEALIKGFCKIGKSNEGYALFKEMMSRGCTPSKFLYQALVDSLSK 491
>gi|326499952|dbj|BAJ90811.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 332
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/144 (23%), Positives = 68/144 (47%), Gaps = 6/144 (4%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
M+ + C++G E +L G K DVV+ +++ A+C+ ++ + + RK+
Sbjct: 167 MLDSLCKNGLVPEAMKLFGLMREKGAIPDVVIYTAVVEAFCKGAKLDDAVRIFRKMQGNG 226
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ P+ ++ ++I+ CK A V+M GH P L+ + KM+ E
Sbjct: 227 VIPNAFSYWLIIQGLCKGDRLDEAVAFCVEMFEAGHSPNAATFVGLVDAVCKMKGVEEG- 285
Query: 121 SVYNMLR-YSKRSMCKALHEKILH 143
N++R + +R+ A+ EK +
Sbjct: 286 --ENLVRSFQERNF--AIDEKSIR 305
>gi|255555533|ref|XP_002518803.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223542184|gb|EEF43728.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 775
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/107 (26%), Positives = 52/107 (48%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I + + G +E+ L + + + DV+ N+++ +C+ M H + ++
Sbjct: 293 LIDGYGKLGLLDESFCLFEEMKDVGCEPDVITYNALINCFCKYEQMPKAFHFLHEMKNSG 352
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLI 107
+ P+ T+ LI CKE M A + ++DM R G P E +SLI
Sbjct: 353 LKPNVVTYSTLIDALCKEHMLQQAIKFLLDMRRVGLSPNEFTYTSLI 399
Score = 41.6 bits (96), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 30/120 (25%), Positives = 53/120 (44%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
MI C+ G K L + D+V NS++ Y + G ++ + ++ ++
Sbjct: 258 MIGYMCKEGDMVTAKSLFHQMKQMGLTPDIVTYNSLIDGYGKLGLLDESFCLFEEMKDVG 317
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
PD T++ LI FCK + A+ + +M G +P S+LI L K +A+
Sbjct: 318 CEPDVITYNALINCFCKYEQMPKAFHFLHEMKNSGLKPNVVTYSTLIDALCKEHMLQQAI 377
Score = 35.4 bits (80), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 24/126 (19%), Positives = 58/126 (46%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C++ E K+L + + K D + +++ + D + +++ ++ EL
Sbjct: 609 LIDGLCKNNYIEAAKKLFDEMQDKNMVPDKIAYTALIDGNLKHKDFQEALNIRSRMSELG 668
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ D + + L+ + + A + +M KG P+E LC L+ ++ + EA+
Sbjct: 669 MELDLHAYTSLVWGLSQGNLVQQARMFLNEMIGKGIVPDEILCIRLLRKYYELGSIDEAI 728
Query: 121 SVYNML 126
+++ L
Sbjct: 729 ELHDEL 734
>gi|224157081|ref|XP_002337799.1| predicted protein [Populus trichocarpa]
gi|222869732|gb|EEF06863.1| predicted protein [Populus trichocarpa]
Length = 367
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/107 (26%), Positives = 50/107 (46%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C+ G + L G + K D+V N+++ +C+ G+ME + +
Sbjct: 217 LIHGHCQDGNMTKALSLFGTMTQRNIKPDIVAYNTLIDGFCKVGEMEKASELWDGMISRK 276
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLI 107
I P++ T+ ILI +C A+R M KG +P C+++I
Sbjct: 277 IFPNHITYGILINAYCSVGHVSEAFRLWDVMIEKGIKPTLVTCNTVI 323
Score = 48.5 bits (114), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 29/120 (24%), Positives = 55/120 (45%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I A+CR G EE ++ K K + N+++ C+ G ++ ++ +
Sbjct: 7 LIGAYCREGLLEEAFEIMNSMADKGLKPSLFTYNAIINGLCKKGRYARAKGILIEMLNIG 66
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+SPD T++ L+ C+ + A +M R+G P+ SSL+ + R +AL
Sbjct: 67 LSPDTTTYNTLLVESCRRDNFSEAKEIFGEMLRQGVVPDLVSFSSLMAVFSRNRHLDQAL 126
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 49/99 (49%), Gaps = 1/99 (1%)
Query: 30 VVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYMLAYRTMV 89
+V N+++ AYCR G +E +M + + + P T++ +I CK+ Y A ++
Sbjct: 1 MVTYNTLIGAYCREGLLEEAFEIMNSMADKGLKPSLFTYNAIINGLCKKGRYARAKGILI 60
Query: 90 DMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVYN-MLR 127
+M G P+ ++L+ + SEA ++ MLR
Sbjct: 61 EMLNIGLSPDTTTYNTLLVESCRRDNFSEAKEIFGEMLR 99
Score = 36.6 bits (83), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 19/73 (26%), Positives = 37/73 (50%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+A+C G E +L K K +V N+++ YCR+GD + ++
Sbjct: 287 LINAYCSVGHVSEAFRLWDVMIEKGIKPTLVTCNTVIKGYCRSGDSSKADEFLGRMIAKG 346
Query: 61 ISPDYNTFHILIK 73
++PD+ +++ LI
Sbjct: 347 VAPDHISYNTLIN 359
Score = 36.2 bits (82), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 23/98 (23%), Positives = 47/98 (47%)
Query: 29 DVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYMLAYRTM 88
D V+ ++ YCR G+M + + ++ E D ++ ++ CKEKM A +
Sbjct: 140 DNVIYTVLMHGYCRNGNMLEALKIRDEMLEQGCVLDVIAYNTILNGLCKEKMLTDADKLF 199
Query: 89 VDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVYNML 126
+M +G P+ ++LI + ++ALS++ +
Sbjct: 200 DEMVERGALPDFYTFTTLIHGHCQDGNMTKALSLFGTM 237
Score = 35.0 bits (79), Expect = 9.8, Method: Compositional matrix adjust.
Identities = 18/90 (20%), Positives = 42/90 (46%)
Query: 6 CRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDY 65
CR F E K++ G+ + D+V +S++ + R ++ + R + + + PD
Sbjct: 82 CRRDNFSEAKEIFGEMLRQGVVPDLVSFSSLMAVFSRNRHLDQALVYFRDMKKFGLVPDN 141
Query: 66 NTFHILIKYFCKEKMYMLAYRTMVDMHRKG 95
+ +L+ +C+ + A + +M +G
Sbjct: 142 VIYTVLMHGYCRNGNMLEALKIRDEMLEQG 171
>gi|357499049|ref|XP_003619813.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355494828|gb|AES76031.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 614
Score = 50.8 bits (120), Expect = 2e-04, Method: Composition-based stats.
Identities = 31/126 (24%), Positives = 60/126 (47%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C +G E D AK D V +++ C+TG+ + + V+RK+D L
Sbjct: 140 LIKGLCLNGKVREALHFHDDVIAKGFHLDQVSYGTLINGLCKTGETRAALQVLRKIDGLL 199
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ P+ ++ +I CK+K+ + A +M K P+ ++LI+ + EA+
Sbjct: 200 VQPNVVMYNTIIDSLCKDKLVIHASDLCSEMIVKRIFPDVVTYTTLIYGCLIVGRLKEAV 259
Query: 121 SVYNML 126
++N +
Sbjct: 260 GLFNQM 265
Score = 41.2 bits (95), Expect = 0.13, Method: Composition-based stats.
Identities = 28/124 (22%), Positives = 50/124 (40%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ C+ G ++ + + + ++V NS++ Y V +
Sbjct: 280 LVDGLCKEGEMKKARNVLAVMIKQGVDSNIVTYNSLMDGYFLVKQENKATFVFNTMARRG 339
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
++PD ++ I+I CK KM A +MH K P +SLI L K S+A
Sbjct: 340 VTPDVQSYSIMINGLCKTKMVDEAVNLFKEMHSKSMAPNTVTYNSLIDGLLKYGRISDAW 399
Query: 121 SVYN 124
+ N
Sbjct: 400 DLVN 403
Score = 40.4 bits (93), Expect = 0.24, Method: Composition-based stats.
Identities = 27/122 (22%), Positives = 55/122 (45%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I + G + L + + DV+ +S+L A C+ ++ + ++ K+ +
Sbjct: 385 LIDGLLKYGRISDAWDLVNEMHNRGQPADVITYSSLLDALCKNHQVDKAITLITKIKDQG 444
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
I P+ T+ IL+ CK A D+ KG+ + ++ + ++ L K EAL
Sbjct: 445 IQPNIYTYTILVDGLCKNGRLKDAQAVYQDLLIKGYHLDVKMYNVMVNGLCKEGLFDEAL 504
Query: 121 SV 122
S+
Sbjct: 505 SL 506
>gi|302784708|ref|XP_002974126.1| hypothetical protein SELMODRAFT_100773 [Selaginella moellendorffii]
gi|300158458|gb|EFJ25081.1| hypothetical protein SELMODRAFT_100773 [Selaginella moellendorffii]
Length = 538
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/122 (25%), Positives = 52/122 (42%), Gaps = 1/122 (0%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ C +G + +L + Y V + N ++ CR + V+ K+ E +
Sbjct: 60 VVDGLCGAGMANQALELVRELSGVYTPT-VFIYNGIITGLCRASRVMDAYKVLEKMVEES 118
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
I P+ T+ IL+ C+ LA +M R G +P +LI HL + EAL
Sbjct: 119 IVPNVFTYTILLNGLCRSNKTKLAREVFQEMKRNGCKPNPITYGTLIQHLSRAGEIDEAL 178
Query: 121 SV 122
V
Sbjct: 179 RV 180
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/153 (22%), Positives = 66/153 (43%)
Query: 2 ISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAI 61
+ A C++G + ++ + DVV + ++ + R G ++ + ++ + +
Sbjct: 271 LDALCKAGYLDRARKSVEELRQSGVVPDVVTYSMLINTFARAGQFDASLELLEDMRRNGV 330
Query: 62 SPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEALS 121
PD T+ LI CKE+ + A+R + M G P +S++ L K E
Sbjct: 331 KPDVVTYSTLINVLCKERKFQDAFRLLELMEAAGSPPNVVTYNSVMDGLCKSGKMDEVHR 390
Query: 122 VYNMLRYSKRSMCKALHEKILHILISGKLLKDA 154
VY M+ S+ S + I++ L +L A
Sbjct: 391 VYEMMLKSRCSPDVVTYSIIMNGLSKAGMLDSA 423
Score = 40.0 bits (92), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 35/141 (24%), Positives = 66/141 (46%), Gaps = 6/141 (4%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ C+ F++ +L EA +VV NS++ C++G M+ V V + +
Sbjct: 340 LINVLCKERKFQDAFRLLELMEAAGSPPNVVTYNSVMDGLCKSGKMDEVHRVYEMMLKSR 399
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYR--TMVDMHRKGHQPEEELCSSLIFHLGKMRAHSE 118
SPD T+ I++ K M A + ++ R+G P+ S +I L + E
Sbjct: 400 CSPDVVTYSIIMNGLSKAGMLDSAVKLFELIKSSREG--PDAAAYSMVITSLCRAGKLEE 457
Query: 119 ALSVYNMLRYS--KRSMCKAL 137
A +Y+ + + ++C+AL
Sbjct: 458 ACGMYHGMEVTVAGDNICRAL 478
Score = 37.0 bits (84), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 28/154 (18%), Positives = 66/154 (42%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ F R+G F+ + +L D K DVV ++++ C+ + ++ ++
Sbjct: 305 LINTFARAGQFDASLELLEDMRRNGVKPDVVTYSTLINVLCKERKFQDAFRLLELMEAAG 364
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
P+ T++ ++ CK +R M + P+ S ++ L K A+
Sbjct: 365 SPPNVVTYNSVMDGLCKSGKMDEVHRVYEMMLKSRCSPDVVTYSIIMNGLSKAGMLDSAV 424
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLKDA 154
++ +++ S+ A + ++ L L++A
Sbjct: 425 KLFELIKSSREGPDAAAYSMVITSLCRAGKLEEA 458
>gi|15219046|ref|NP_175671.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75207557|sp|Q9SSR4.1|PPR77_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g52620
gi|5903044|gb|AAD55603.1|AC008016_13 Contains 3 PF|01535 DUF domains [Arabidopsis thaliana]
gi|332194709|gb|AEE32830.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 819
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/107 (28%), Positives = 55/107 (51%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I F RSG F+E +++ K K DVV N+M+ +CR+G ++ + M +++E
Sbjct: 491 LIDGFIRSGDFDEARKVFSLSVEKGVKVDVVHHNAMIKGFCRSGMLDEALACMNRMNEEH 550
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLI 107
+ PD T+ +I + K++ A + M + +P +SLI
Sbjct: 551 LVPDKFTYSTIIDGYVKQQDMATAIKIFRYMEKNKCKPNVVTYTSLI 597
Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 25/98 (25%), Positives = 49/98 (50%), Gaps = 6/98 (6%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDK---YDVVLLNSMLCAYCRTGDMESVMHVMRKLD 57
++ C G E ++L E ++ K ++V N+++ YC+ GD+E+ V ++L
Sbjct: 211 LVKGMCNEGKVEVGRKL---IEGRWGKGCIPNIVFYNTIIGGYCKLGDIENAYLVFKELK 267
Query: 58 ELAISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKG 95
P TF +I FCKE ++ + R + ++ +G
Sbjct: 268 LKGFMPTLETFGTMINGFCKEGDFVASDRLLSEVKERG 305
Score = 43.1 bits (100), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 27/112 (24%), Positives = 50/112 (44%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
MI FCRSG +E ++ D ++++ Y + DM + + + R +++
Sbjct: 526 MIKGFCRSGMLDEALACMNRMNEEHLVPDKFTYSTIIDGYVKQQDMATAIKIFRYMEKNK 585
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGK 112
P+ T+ LI FC + + +A T +M + P ++LI L K
Sbjct: 586 CKPNVVTYTSLINGFCCQGDFKMAEETFKEMQLRDLVPNVVTYTTLIRSLAK 637
Score = 40.0 bits (92), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 30/111 (27%), Positives = 51/111 (45%), Gaps = 8/111 (7%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTG----DMESVMHVMRKL 56
MI+ FC+ G F + +L + + + + V LN+++ A R G ES+ ++
Sbjct: 281 MINGFCKEGDFVASDRLLSEVKERGLRVSVWFLNNIIDAKYRHGYKVDPAESIGWIIAN- 339
Query: 57 DELAISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLI 107
PD T++ILI CKE +A + + +KG P + LI
Sbjct: 340 ---DCKPDVATYNILINRLCKEGKKEVAVGFLDEASKKGLIPNNLSYAPLI 387
Score = 38.1 bits (87), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 30/136 (22%), Positives = 61/136 (44%), Gaps = 3/136 (2%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++S C++G F K L + + D + +++ + R+GD + V E
Sbjct: 456 LMSGLCKTGRFLPAKLLFSEMLDRNILPDAYVYATLIDGFIRSGDFDEARKVFSLSVEKG 515
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ D + +IK FC+ M A M M+ + P++ S++I K + + A+
Sbjct: 516 VKVDVVHHNAMIKGFCRSGMLDEALACMNRMNEEHLVPDKFTYSTIIDGYVKQQDMATAI 575
Query: 121 SVYNMLRYSKRSMCKA 136
++ RY +++ CK
Sbjct: 576 KIF---RYMEKNKCKP 588
Score = 38.1 bits (87), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 26/125 (20%), Positives = 59/125 (47%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I A+C+S ++ +L + K D+V ++ +G M+ +++ KL +
Sbjct: 386 LIQAYCKSKEYDIASKLLLQMAERGCKPDIVTYGILIHGLVVSGHMDDAVNMKVKLIDRG 445
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+SPD +++L+ CK ++ A +M + P+ + ++LI + EA
Sbjct: 446 VSPDAAIYNMLMSGLCKTGRFLPAKLLFSEMLDRNILPDAYVYATLIDGFIRSGDFDEAR 505
Query: 121 SVYNM 125
V+++
Sbjct: 506 KVFSL 510
>gi|356566887|ref|XP_003551657.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g62910-like [Glycine max]
Length = 525
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/165 (26%), Positives = 71/165 (43%), Gaps = 17/165 (10%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ A C+ G E + + G + + DVV N+++ +C G M V ++ E
Sbjct: 273 LVDALCKLGMVAEARNVFGLMIKRGLEPDVVSCNALMNGWCLRGCMSEAKEVFDRMVERG 332
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGK-------- 112
P+ ++ LI +CK KM A R + +MH++ P+ + L+ L K
Sbjct: 333 KLPNVISYSTLINGYCKVKMVDEALRLLTEMHQRNLVPDTVTYNCLLDGLSKSGRVLYEW 392
Query: 113 -----MRAHSEA--LSVYNML--RYSKRSMCKALHEKILHILISG 148
MRA +A L YN+L Y KR HI+ +G
Sbjct: 393 DLVEAMRASGQAPDLITYNVLLDDYLKRECLDKALALFQHIVDTG 437
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/128 (25%), Positives = 56/128 (43%), Gaps = 7/128 (5%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ C+ G E L + K DV NS++ +C G + + R L+E+
Sbjct: 202 VVDGLCKEGLVTEACGLCSEMVGKGICIDVFTYNSLIHGFCGAGQFQGAV---RLLNEMV 258
Query: 61 ----ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAH 116
+ PD TF+IL+ CK M A M ++G +P+ C++L+
Sbjct: 259 MKEDVRPDVYTFNILVDALCKLGMVAEARNVFGLMIKRGLEPDVVSCNALMNGWCLRGCM 318
Query: 117 SEALSVYN 124
SEA V++
Sbjct: 319 SEAKEVFD 326
Score = 35.4 bits (80), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 30/121 (24%), Positives = 52/121 (42%), Gaps = 1/121 (0%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYD-KYDVVLLNSMLCAYCRTGDMESVMHVMRKLDEL 59
+I FC +G F+ +L + K D + DV N ++ A C+ G + +V + +
Sbjct: 237 LIHGFCGAGQFQGAVRLLNEMVMKEDVRPDVYTFNILVDALCKLGMVAEARNVFGLMIKR 296
Query: 60 AISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEA 119
+ PD + + L+ +C A M +G P S+LI K++ EA
Sbjct: 297 GLEPDVVSCNALMNGWCLRGCMSEAKEVFDRMVERGKLPNVISYSTLINGYCKVKMVDEA 356
Query: 120 L 120
L
Sbjct: 357 L 357
>gi|302143622|emb|CBI22375.3| unnamed protein product [Vitis vinifera]
Length = 407
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/127 (24%), Positives = 65/127 (51%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C+ G ++E ++L + ++ + + V + ++ + CR G ++ + V++ + E
Sbjct: 248 IIRGMCKEGMWDEGEKLVAEMFSRGCEPNKVTYSILISSLCRFGRIDEAISVLKVMIEKE 307
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
++PD ++ LI CKE LA M M G P+ ++++ L K ++AL
Sbjct: 308 LTPDTYSYDPLISALCKEGRLDLAIGIMDYMISNGCLPDIVNYNTILAALCKNGNANQAL 367
Query: 121 SVYNMLR 127
++N LR
Sbjct: 368 EIFNKLR 374
Score = 40.0 bits (92), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 33/157 (21%), Positives = 60/157 (38%), Gaps = 35/157 (22%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCR------------------ 42
+IS FC+ E Q+ +A+ D+V N M+ + C
Sbjct: 143 VISGFCKVNRIEAATQVLNRMKARGFLPDIVTYNIMIGSLCNRRKLGLALKVLDQLLLDN 202
Query: 43 -----------------TGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYMLAY 85
G + M ++ ++ + PD T++ +I+ CKE M+
Sbjct: 203 CMPTVITYTILIEATIVEGGINEAMKLLEEMLARGLLPDMYTYNAIIRGMCKEGMWDEGE 262
Query: 86 RTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSV 122
+ + +M +G +P + S LI L + EA+SV
Sbjct: 263 KLVAEMFSRGCEPNKVTYSILISSLCRFGRIDEAISV 299
>gi|222617300|gb|EEE53432.1| hypothetical protein OsJ_36514 [Oryza sativa Japonica Group]
Length = 607
Score = 50.4 bits (119), Expect = 2e-04, Method: Composition-based stats.
Identities = 33/118 (27%), Positives = 56/118 (47%), Gaps = 1/118 (0%)
Query: 33 LNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYMLAYRTMVDMH 92
NS+L A R G +E V ++ L I D T++ I CK LA + ++DM
Sbjct: 55 FNSLLAACSRVGHLEDARAVFDEMIHLGIGRDIYTYNTFIDAICKCGNMELAMQVLLDME 114
Query: 93 RKGHQPEEELCSSLIFHLGKMRAHSEALSVYNMLRYSKRSMCKALHEKILHILI-SGK 149
KG +P S+LI K+ + EAL + ++ + + + + +L I + +GK
Sbjct: 115 AKGVKPNVVTYSTLIDGYSKLEKYEEALKLCEKMKSMRIQLDRVCYNTLLAIYVKAGK 172
Score = 48.9 bits (115), Expect = 6e-04, Method: Composition-based stats.
Identities = 31/123 (25%), Positives = 58/123 (47%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I + + +EE +L ++ + D V N++L Y + G + +V +++EL
Sbjct: 128 LIDGYSKLEKYEEALKLCEKMKSMRIQLDRVCYNTLLAIYVKAGKYAEIANVCDEMEELG 187
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
I D T++ LI + K+ + + DM ++G P S+LI K H +A
Sbjct: 188 IEKDTVTYNSLINGYGKQGRLDIVSILVQDMRKRGVAPSVLTYSTLIDIYSKAGMHGDAF 247
Query: 121 SVY 123
+VY
Sbjct: 248 NVY 250
Score = 48.1 bits (113), Expect = 0.001, Method: Composition-based stats.
Identities = 30/124 (24%), Positives = 60/124 (48%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+++ + ++G + E + + E + D V NS++ Y + G ++ V +++ + +
Sbjct: 163 LLAIYVKAGKYAEIANVCDEMEELGIEKDTVTYNSLINGYGKQGRLDIVSILVQDMRKRG 222
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
++P T+ LI + K M+ A+ +D G +P+ L SS I L K AL
Sbjct: 223 VAPSVLTYSTLIDIYSKAGMHGDAFNVYLDFKESGLKPDVVLFSSFIDTLAKNGLIEWAL 282
Query: 121 SVYN 124
S+ N
Sbjct: 283 SLLN 286
Score = 39.3 bits (90), Expect = 0.53, Method: Composition-based stats.
Identities = 21/82 (25%), Positives = 42/82 (51%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I + ++G + + DF+ K DVVL +S + + G +E + ++ + E+
Sbjct: 233 LIDIYSKAGMHGDAFNVYLDFKESGLKPDVVLFSSFIDTLAKNGLIEWALSLLNDMTEMG 292
Query: 61 ISPDYNTFHILIKYFCKEKMYM 82
I P+ T++ +I F K K+ M
Sbjct: 293 IKPNVVTYNAIIDAFGKSKVMM 314
Score = 35.8 bits (81), Expect = 5.4, Method: Composition-based stats.
Identities = 20/86 (23%), Positives = 41/86 (47%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+++A R G E+ + + + D+ N+ + A C+ G+ME M V+ ++
Sbjct: 58 LLAACSRVGHLEDARAVFDEMIHLGIGRDIYTYNTFIDAICKCGNMELAMQVLLDMEAKG 117
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYR 86
+ P+ T+ LI + K + Y A +
Sbjct: 118 VKPNVVTYSTLIDGYSKLEKYEEALK 143
>gi|147861320|emb|CAN83994.1| hypothetical protein VITISV_031191 [Vitis vinifera]
Length = 559
Score = 50.4 bits (119), Expect = 2e-04, Method: Composition-based stats.
Identities = 28/107 (26%), Positives = 53/107 (49%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ C+ G E K+L + + K D ++ C+ GD+ES + + +++ +
Sbjct: 371 LINGLCKVGDLREAKKLVIEMTQRGLKPDKFTYTMLIDGCCKEGDLESALEIRKEMVKEG 430
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLI 107
I D F LI FC+E + A RT+ +M G +P++ + +I
Sbjct: 431 IELDNVAFTALISGFCREGQVIEAERTLREMLEAGIKPDDATYTMVI 477
Score = 47.4 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 23/98 (23%), Positives = 46/98 (46%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C+ G E ++ + + + D V +++ +CR G + +R++ E
Sbjct: 406 LIDGCCKEGDLESALEIRKEMVKEGIELDNVAFTALISGFCREGQVIEAERTLREMLEAG 465
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQP 98
I PD T+ ++I FCK+ ++ + +M GH P
Sbjct: 466 IKPDDATYTMVIHGFCKKGDVKTGFKLLKEMQCDGHVP 503
Score = 46.6 bits (109), Expect = 0.003, Method: Composition-based stats.
Identities = 26/107 (24%), Positives = 53/107 (49%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ C+ E + L G+ + + VV N+++ YC++G+++ + R + E
Sbjct: 231 LMHRLCKEHKINEAQLLFGEIGKRGLRPTVVSFNTLINGYCKSGNLDQGFRLKRFMMENR 290
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLI 107
+ PD T+ +LI CKE A + ++M +G P + ++LI
Sbjct: 291 VFPDVFTYSVLINGLCKEGQLDDANKLFLEMCDRGLVPNDVTFTTLI 337
Score = 38.5 bits (88), Expect = 1.0, Method: Composition-based stats.
Identities = 22/107 (20%), Positives = 53/107 (49%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ C+ G ++ +L + + + V +++ +C TG + M + +++
Sbjct: 301 LINGLCKEGQLDDANKLFLEMCDRGLVPNDVTFTTLINGHCVTGRADLGMEIYQQMLRKG 360
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLI 107
+ PD T++ LI CK A + +++M ++G +P++ + LI
Sbjct: 361 VKPDVITYNTLINGLCKVGDLREAKKLVIEMTQRGLKPDKFTYTMLI 407
Score = 37.4 bits (85), Expect = 2.1, Method: Composition-based stats.
Identities = 24/107 (22%), Positives = 51/107 (47%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ C +G + ++ K K DV+ N+++ C+ GD+ ++ ++ +
Sbjct: 336 LINGHCVTGRADLGMEIYQQMLRKGVKPDVITYNTLINGLCKVGDLREAKKLVIEMTQRG 395
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLI 107
+ PD T+ +LI CKE A +M ++G + + ++LI
Sbjct: 396 LKPDKFTYTMLIDGCCKEGDLESALEIRKEMVKEGIELDNVAFTALI 442
>gi|125541439|gb|EAY87834.1| hypothetical protein OsI_09254 [Oryza sativa Indica Group]
Length = 502
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/154 (22%), Positives = 66/154 (42%)
Query: 2 ISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAI 61
++A CR G + + D DVV N++L A+CR +E+ + VM ++ E +
Sbjct: 19 LAALCRGGSLAAAESVLVDAIRLGLPPDVVTYNTLLAAHCRAAGLEAGLAVMGRMREAGV 78
Query: 62 SPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEALS 121
PD T++ LI + + + A +M R G P+ + L+ L + +A
Sbjct: 79 EPDAVTYNSLIAGAARRGLPIHALDLFDEMLRAGIAPDSWSYNPLMHCLFRSGHPEDAYR 138
Query: 122 VYNMLRYSKRSMCKALHEKILHILISGKLLKDAY 155
V+ + + C + +L + +AY
Sbjct: 139 VFADMAEKGIAPCDTTYNTLLDGMFRAGYAMNAY 172
Score = 45.1 bits (105), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 36/135 (26%), Positives = 61/135 (45%), Gaps = 9/135 (6%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDEL- 59
+++A CR+ E + G + D V NS++ R G +H + DE+
Sbjct: 53 LLAAHCRAAGLEAGLAVMGRMREAGVEPDAVTYNSLIAGAARRG---LPIHALDLFDEML 109
Query: 60 --AISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHS 117
I+PD +++ L+ + AYR DM KG P + ++L+ G RA
Sbjct: 110 RAGIAPDSWSYNPLMHCLFRSGHPEDAYRVFADMAEKGIAPCDTTYNTLLD--GMFRA-G 166
Query: 118 EALSVYNMLRYSKRS 132
A++ Y M RY +R+
Sbjct: 167 YAMNAYRMFRYLQRA 181
Score = 42.7 bits (99), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 30/126 (23%), Positives = 52/126 (41%)
Query: 32 LLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYMLAYRTMVDM 91
LLN L A CR G + + V+ L + PD T++ L+ C+ M M
Sbjct: 14 LLNVCLAALCRGGSLAAAESVLVDAIRLGLPPDVVTYNTLLAAHCRAAGLEAGLAVMGRM 73
Query: 92 HRKGHQPEEELCSSLIFHLGKMRAHSEALSVYNMLRYSKRSMCKALHEKILHILISGKLL 151
G +P+ +SLI + AL +++ + + + + ++H L
Sbjct: 74 REAGVEPDAVTYNSLIAGAARRGLPIHALDLFDEMLRAGIAPDSWSYNPLMHCLFRSGHP 133
Query: 152 KDAYIV 157
+DAY V
Sbjct: 134 EDAYRV 139
>gi|15234269|ref|NP_192906.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75213756|sp|Q9T0D6.1|PP306_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g11690
gi|4539460|emb|CAB39940.1| putative protein [Arabidopsis thaliana]
gi|7267869|emb|CAB78212.1| putative protein [Arabidopsis thaliana]
gi|91806660|gb|ABE66057.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|332657639|gb|AEE83039.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 566
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/108 (25%), Positives = 52/108 (48%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++S FCR G ++ + E + K V ++ + R+ +ME + + ++EL
Sbjct: 379 LVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEELG 438
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIF 108
+ PD +T+ +LI FC + A R M K +P E + +++I
Sbjct: 439 LVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKNCEPNEVIYNTMIL 486
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/104 (24%), Positives = 50/104 (48%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I FC G E +L K + + V+ N+M+ YC+ G + ++++++E
Sbjct: 449 LIHGFCIKGQMNEASRLFKSMVEKNCEPNEVIYNTMILGYCKEGSSYRALKLLKEMEEKE 508
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCS 104
++P+ ++ +I+ CKE+ A R + M G P + S
Sbjct: 509 LAPNVASYRYMIEVLCKERKSKEAERLVEKMIDSGIDPSTSILS 552
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 27/107 (25%), Positives = 47/107 (43%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I FC G + L D +++ +V N ++ +CR GD ++++++E
Sbjct: 344 LIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEERG 403
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLI 107
I P T+ ILI F + A + + M G P+ S LI
Sbjct: 404 IKPSKVTYTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLI 450
Score = 45.1 bits (105), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 20/98 (20%), Positives = 46/98 (46%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I CR E ++ ++ +++ N+++ +C G + + + R L
Sbjct: 309 LIGGLCREMKLNEANKVVDQMKSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRG 368
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQP 98
+SP T++IL+ FC++ A + + +M +G +P
Sbjct: 369 LSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEERGIKP 406
>gi|222613080|gb|EEE51212.1| hypothetical protein OsJ_32033 [Oryza sativa Japonica Group]
Length = 1144
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/152 (24%), Positives = 70/152 (46%), Gaps = 5/152 (3%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I +C +G +E +L + K D V N+++ YC+ ME + + R+++
Sbjct: 520 LIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSG 579
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+SPD T++I+++ + + A V + G Q E + ++ L K EAL
Sbjct: 580 VSPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQLELSTYNIILHGLCKNNLTDEAL 639
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLK 152
++ L + L + +I+I G LLK
Sbjct: 640 RMFQNLCLTDLQ----LETRTFNIMI-GALLK 666
Score = 41.6 bits (96), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 18/66 (27%), Positives = 34/66 (51%)
Query: 34 NSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHR 93
NS++ YC +G + + ++K+ + PD T++ L+ Y CK A + M +
Sbjct: 273 NSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTK 332
Query: 94 KGHQPE 99
+G +PE
Sbjct: 333 RGLKPE 338
Score = 40.4 bits (93), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 33/154 (21%), Positives = 67/154 (43%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I + C+ G E+++L K D++ ++++ YC G M+ ++ + +
Sbjct: 485 IIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVG 544
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ PD T++ LI +CK A +M G P+ + ++ L + R + A
Sbjct: 545 MKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAK 604
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLKDA 154
+Y + S + + + ILH L L +A
Sbjct: 605 ELYVGITESGTQLELSTYNIILHGLCKNNLTDEA 638
Score = 39.7 bits (91), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 31/136 (22%), Positives = 63/136 (46%), Gaps = 17/136 (12%)
Query: 8 SGCFEETKQLAGDFEAKYDKY----------DVVLLNSMLCAYCRTGDMESVMHVMRKLD 57
+G F+E GD + Y Y +VV +S++ A C+ M+ M V+ +
Sbjct: 207 NGFFKE-----GDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMV 261
Query: 58 ELAISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHS 117
+ + P+ T++ ++ +C A + MH G +P+ +SL+ +L K +
Sbjct: 262 KNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCT 321
Query: 118 EALSVYNMLRYSKRSM 133
EA +++ + +KR +
Sbjct: 322 EARKMFDSM--TKRGL 335
Score = 37.0 bits (84), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 21/75 (28%), Positives = 35/75 (46%)
Query: 36 MLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKG 95
++CAY + G ++ M V K+ + ++PD T+ +I CK A R M +
Sbjct: 380 LICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDER 439
Query: 96 HQPEEELCSSLIFHL 110
P + +SLI L
Sbjct: 440 LSPGNIVYNSLIHSL 454
Score = 35.4 bits (80), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 29/154 (18%), Positives = 63/154 (40%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ +C SG +E + + DVV NS++ C+ G + + +
Sbjct: 275 IVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRG 334
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ P+ T+ L++ + + + + + M R G P + S LI K +A+
Sbjct: 335 LKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAM 394
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLKDA 154
V++ +R + + ++ IL ++DA
Sbjct: 395 LVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDA 428
>gi|242078641|ref|XP_002444089.1| hypothetical protein SORBIDRAFT_07g007540 [Sorghum bicolor]
gi|241940439|gb|EES13584.1| hypothetical protein SORBIDRAFT_07g007540 [Sorghum bicolor]
Length = 942
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/136 (26%), Positives = 64/136 (47%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
M+ A+ ++G EE + + K+D N M+ Y R G +E V +V+ +L +
Sbjct: 805 MLDAYGKAGQLEEFASVLQKMKRAKCKFDHYTYNIMINIYGRRGWIEDVSNVLAELKDRG 864
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ PD +++ LIK + +M A + M +M KG P+ ++LI L + EA+
Sbjct: 865 VVPDLYSYNTLIKAYGIARMPEDAVKLMQEMRIKGISPDRVTYANLIAALQRNENFLEAV 924
Query: 121 SVYNMLRYSKRSMCKA 136
+R + C A
Sbjct: 925 KWSLWMRQTGVVGCGA 940
>gi|356510082|ref|XP_003523769.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like [Glycine max]
Length = 602
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/122 (25%), Positives = 53/122 (43%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I A C + +L + K K DVV N ++ C+ G ++ + + +
Sbjct: 249 LIEATCNDSGVGQAMKLLDEMRKKGCKPDVVTYNVLINGICKEGRLDEAIKFLNNMPSYG 308
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
P+ T +I+++ C +M A R + DM RKG P + LI L + R A+
Sbjct: 309 CKPNVITHNIILRSMCSTGRWMDAERLLSDMLRKGCSPSVVTFNILINFLCRKRLLGRAI 368
Query: 121 SV 122
V
Sbjct: 369 DV 370
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 49/95 (51%)
Query: 29 DVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYMLAYRTM 88
D+V N++L A C+ G +++ + ++ +L SP T++ +I K A +
Sbjct: 417 DIVTYNTLLTALCKDGKVDAAVEILNQLSSKGCSPVLITYNTVIDGLTKVGKTEYAVELL 476
Query: 89 VDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVY 123
+M RKG +P+ S+L+ LG+ EA+ ++
Sbjct: 477 EEMRRKGLKPDIITYSTLLRGLGREGKVDEAIKIF 511
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/124 (25%), Positives = 60/124 (48%), Gaps = 3/124 (2%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I +C+SG ++ ++ E DVV N++L + C +G ++ M V+ + +
Sbjct: 182 LIGGYCKSGEIDKALEV---LERMSVAPDVVTYNTILRSLCDSGKLKEAMEVLDRQLQRE 238
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
PD T+ ILI+ C + A + + +M +KG +P+ + LI + K EA+
Sbjct: 239 CYPDVITYTILIEATCNDSGVGQAMKLLDEMRKKGCKPDVVTYNVLINGICKEGRLDEAI 298
Query: 121 SVYN 124
N
Sbjct: 299 KFLN 302
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/88 (26%), Positives = 48/88 (54%), Gaps = 8/88 (9%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I FCRSG ++ ++ E DV+ N ++ YC++G+++ + V L+ ++
Sbjct: 147 LIRGFCRSGKTKKATRIMEILENSGAVPDVITYNVLIGGYCKSGEIDKALEV---LERMS 203
Query: 61 ISPDYNTFHILIKYFC-----KEKMYML 83
++PD T++ +++ C KE M +L
Sbjct: 204 VAPDVVTYNTILRSLCDSGKLKEAMEVL 231
Score = 42.0 bits (97), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 23/99 (23%), Positives = 45/99 (45%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ C+ G +E + + + K +V+ N +L + C TG ++ +
Sbjct: 284 LINGICKEGRLDEAIKFLNNMPSYGCKPNVITHNIILRSMCSTGRWMDAERLLSDMLRKG 343
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPE 99
SP TF+ILI + C++++ A + M + G P
Sbjct: 344 CSPSVVTFNILINFLCRKRLLGRAIDVLEKMPKHGCVPN 382
Score = 40.4 bits (93), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 20/71 (28%), Positives = 35/71 (49%)
Query: 7 RSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYN 66
R+G EE + + D DV+ S++ +CR+G + +M L+ PD
Sbjct: 118 RNGELEEGLKFLERMIYQGDIPDVIACTSLIRGFCRSGKTKKATRIMEILENSGAVPDVI 177
Query: 67 TFHILIKYFCK 77
T+++LI +CK
Sbjct: 178 TYNVLIGGYCK 188
Score = 36.2 bits (82), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 24/107 (22%), Positives = 48/107 (44%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I + G E +L + K K D++ +++L R G ++ + + ++ L+
Sbjct: 459 VIDGLTKVGKTEYAVELLEEMRRKGLKPDIITYSTLLRGLGREGKVDEAIKIFHDMEGLS 518
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLI 107
I P T++ ++ CK + A + M KG +P E + LI
Sbjct: 519 IKPSAVTYNAIMLGLCKAQQTSRAIDFLAYMVEKGCKPTEATYTILI 565
Score = 36.2 bits (82), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 29/148 (19%), Positives = 62/148 (41%), Gaps = 4/148 (2%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+++A C+ G + ++ +K ++ N+++ + G E + ++ ++
Sbjct: 424 LLTALCKDGKVDAAVEILNQLSSKGCSPVLITYNTVIDGLTKVGKTEYAVELLEEMRRKG 483
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ PD T+ L++ +E A + DM +P ++++ L K + S A+
Sbjct: 484 LKPDIITYSTLLRGLGREGKVDEAIKIFHDMEGLSIKPSAVTYNAIMLGLCKAQQTSRAI 543
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISG 148
+ L Y CK E ILI G
Sbjct: 544 ---DFLAYMVEKGCKP-TEATYTILIEG 567
>gi|255572834|ref|XP_002527349.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223533268|gb|EEF35021.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 443
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/97 (24%), Positives = 45/97 (46%)
Query: 2 ISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAI 61
+S R+G EE + + D D++ S++ +C+ G +M +++
Sbjct: 91 LSKLVRNGELEEGFRFLESMVYRGDIPDIIPCTSLIRGFCKIGKTRKATRIMEIIEDSGA 150
Query: 62 SPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQP 98
PD T+++LI C +M A + + DM R+G P
Sbjct: 151 VPDVITYNVLISGMCSTGRWMDAEKLLADMVRRGCSP 187
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 32/124 (25%), Positives = 60/124 (48%), Gaps = 3/124 (2%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+IS C +G + + ++L D + VV N ++ CR G + + V+ K+ +
Sbjct: 160 LISGMCSTGRWMDAEKLLADMVRRGCSPSVVTFNILINFLCRKGLLGRAIDVLEKMPKHG 219
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHL---GKMRAHS 117
+P+ +++ L+ FCKEK A + M +G P+ ++L+ L GK+ A
Sbjct: 220 CTPNSLSYNPLLHGFCKEKKMERAIEYLGKMTSRGCYPDIVTYNTLLTALCKDGKVDAAV 279
Query: 118 EALS 121
E L+
Sbjct: 280 ELLN 283
Score = 45.1 bits (105), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 28/123 (22%), Positives = 57/123 (46%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ FC+ E + G ++ D+V N++L A C+ G +++ + ++ +L
Sbjct: 230 LLHGFCKEKKMERAIEYLGKMTSRGCYPDIVTYNTLLTALCKDGKVDAAVELLNQLSSKG 289
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
SP T++ +I K A + + +M KG +P+ SSL+ L + EA+
Sbjct: 290 CSPVLITYNTVIDGLSKVGKTDQAAKLLDEMRAKGLKPDIITYSSLVGGLSREGKVDEAI 349
Query: 121 SVY 123
+
Sbjct: 350 KFF 352
Score = 42.4 bits (98), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 29/126 (23%), Positives = 57/126 (45%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I + G ++ +L + AK K D++ +S++ R G ++ + L+ L
Sbjct: 300 VIDGLSKVGKTDQAAKLLDEMRAKGLKPDIITYSSLVGGLSREGKVDEAIKFFHDLEVLG 359
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ P+ T++ ++ CK + A + M ++G +P E + LI L EAL
Sbjct: 360 VKPNAITYNAIMLGLCKARKTDRAIDFLAYMVQRGCKPTEASYTILIEGLAYEGLAKEAL 419
Query: 121 SVYNML 126
+ N L
Sbjct: 420 ELLNEL 425
Score = 42.0 bits (97), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 23/99 (23%), Positives = 41/99 (41%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I FC+ G + ++ E DV+ N ++ C TG ++ +
Sbjct: 125 LIRGFCKIGKTRKATRIMEIIEDSGAVPDVITYNVLISGMCSTGRWMDAEKLLADMVRRG 184
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPE 99
SP TF+ILI + C++ + A + M + G P
Sbjct: 185 CSPSVVTFNILINFLCRKGLLGRAIDVLEKMPKHGCTPN 223
>gi|224134148|ref|XP_002321748.1| predicted protein [Populus trichocarpa]
gi|222868744|gb|EEF05875.1| predicted protein [Populus trichocarpa]
Length = 1041
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/151 (25%), Positives = 71/151 (47%), Gaps = 1/151 (0%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I + G F+E ++ + K + DV+ NS++ C++ ME + ++ E
Sbjct: 487 LIKGHVQEGRFQEAVRILKVMDKKGVQPDVLCYNSVIIGLCKSRKMEEAKDYLVEMIERG 546
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ P+ T+ LI +CK +A R +M G P + +C++LI K + +EA
Sbjct: 547 LKPNVYTYGALIHGYCKSGEMQVADRYFKEMLGCGIAPNDVVCTALIDGYCKEGSTTEAT 606
Query: 121 SVYN-MLRYSKRSMCKALHEKILHILISGKL 150
S++ ML S + I +L +GKL
Sbjct: 607 SIFRCMLGRSVHPDVRTYSALIHGLLRNGKL 637
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/122 (27%), Positives = 58/122 (47%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+A R+G +E K+L + E K +V N ++ CR G+++ + + +D+
Sbjct: 242 LINAHFRAGNAKEGKRLLFEMEEKGCSPSLVTYNVVIGGLCRAGEVDEAFELKKLMDKKG 301
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ D T+ ILI F K+K A + +M KG +P ++LI + EA
Sbjct: 302 LVADVFTYSILIDGFGKQKRCTEAKLMLEEMFSKGLKPGHVAYTALIDGFMRQGDSGEAF 361
Query: 121 SV 122
V
Sbjct: 362 RV 363
Score = 45.1 bits (105), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 29/123 (23%), Positives = 57/123 (46%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+IS FC+ G + QL K +++ N+++ C+ G++E + +
Sbjct: 662 IISGFCKQGGIGKAFQLHEYMCQKGISPNIITYNALINGLCKAGEIERARELFDGIPGKG 721
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
++ + T+ +I +CK A+R +M KG P+ + S+LI K +AL
Sbjct: 722 LAHNAVTYATIIDGYCKSGNLSKAFRLFDEMTLKGVPPDSFVYSALIDGCRKEGNTEKAL 781
Query: 121 SVY 123
S++
Sbjct: 782 SLF 784
Score = 43.1 bits (100), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 27/126 (21%), Positives = 59/126 (46%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I F R G E ++ + A+ K ++ N+++ C+ GDME ++ ++ +
Sbjct: 347 LIDGFMRQGDSGEAFRVKEEMLARGVKLNLFTYNALVKGVCKFGDMEKADALLNEMIMVG 406
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
I PD T++ +I+ + KE+ + +M + P C +I L + + +A
Sbjct: 407 IKPDTQTYNNMIEGYLKEQNTSRVKDLLSEMKKSNLVPTAYTCGMIINGLCRHGSIEDAS 466
Query: 121 SVYNML 126
V+ ++
Sbjct: 467 RVFEIM 472
Score = 42.0 bits (97), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 21/92 (22%), Positives = 45/92 (48%)
Query: 33 LNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYMLAYRTMVDMH 92
LN+++ +C++G + ++ + + + PD+ T+ ILI Y CK A + VDM
Sbjct: 798 LNALMDGFCKSGKVIEANQLLEDMVDKHVKPDHVTYTILIDYHCKTGFLKEAEQFFVDMQ 857
Query: 93 RKGHQPEEELCSSLIFHLGKMRAHSEALSVYN 124
++ P ++L+ SE ++++
Sbjct: 858 KRNLMPNALTYTALLSGYNMAGRRSEMFALFD 889
Score = 41.2 bits (95), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 39/84 (46%)
Query: 36 MLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKG 95
++ CR G +E V + L + P+ + LIK +E + A R + M +KG
Sbjct: 452 IINGLCRHGSIEDASRVFEIMVSLGVKPNAVIYTTLIKGHVQEGRFQEAVRILKVMDKKG 511
Query: 96 HQPEEELCSSLIFHLGKMRAHSEA 119
QP+ +S+I L K R EA
Sbjct: 512 VQPDVLCYNSVIIGLCKSRKMEEA 535
Score = 39.3 bits (90), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 28/122 (22%), Positives = 54/122 (44%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C++G +E +Q D + + + + ++L Y G + + ++
Sbjct: 836 LIDYHCKTGFLKEAEQFFVDMQKRNLMPNALTYTALLSGYNMAGRRSEMFALFDEMIAKD 895
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
I PD T+ ++I KE ++ + + DM +KG + +C LI L + SE L
Sbjct: 896 IEPDGVTWSVMIDAHLKEGDHVKTLKLVDDMLKKGGNVSKNVCHVLIDPLCRKEHVSEVL 955
Query: 121 SV 122
V
Sbjct: 956 KV 957
Score = 38.1 bits (87), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 19/99 (19%), Positives = 48/99 (48%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ CR G E+ ++ + K + V+ +++ + + G + + +++ +D+
Sbjct: 452 IINGLCRHGSIEDASRVFEIMVSLGVKPNAVIYTTLIKGHVQEGRFQEAVRILKVMDKKG 511
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPE 99
+ PD ++ +I CK + A +V+M +G +P
Sbjct: 512 VQPDVLCYNSVIIGLCKSRKMEEAKDYLVEMIERGLKPN 550
Score = 38.1 bits (87), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 22/99 (22%), Positives = 44/99 (44%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I +C+ G E + + DV ++++ R G ++ M ++ + E
Sbjct: 592 LIDGYCKEGSTTEATSIFRCMLGRSVHPDVRTYSALIHGLLRNGKLQGAMELLSEFLEKG 651
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPE 99
+ PD T++ +I FCK+ A++ M +KG P
Sbjct: 652 LVPDVFTYNSIISGFCKQGGIGKAFQLHEYMCQKGISPN 690
Score = 38.1 bits (87), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 20/77 (25%), Positives = 36/77 (46%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I R+G + +L +F K DV NS++ +C+ G + + + +
Sbjct: 627 LIHGLLRNGKLQGAMELLSEFLEKGLVPDVFTYNSIISGFCKQGGIGKAFQLHEYMCQKG 686
Query: 61 ISPDYNTFHILIKYFCK 77
ISP+ T++ LI CK
Sbjct: 687 ISPNIITYNALINGLCK 703
>gi|297727505|ref|NP_001176116.1| Os10g0368800 [Oryza sativa Japonica Group]
gi|20043026|gb|AAM08834.1|AC113335_14 Putative PPR-repeat protein [Oryza sativa Japonica Group]
gi|22830267|gb|AAN08650.1| hypothetical protein [Oryza sativa Japonica Group]
gi|31431615|gb|AAP53366.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|255679344|dbj|BAH94844.1| Os10g0368800 [Oryza sativa Japonica Group]
Length = 913
Score = 50.4 bits (119), Expect = 2e-04, Method: Composition-based stats.
Identities = 44/164 (26%), Positives = 79/164 (48%), Gaps = 12/164 (7%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I A R G +++ +LA + DVV N ++ A C+ G+++ + ++ ++ E
Sbjct: 492 IIHALLRDGRWQDAVRLAKEMILHGCSLDVVSYNGLIKAMCKDGNVDRSLVLLEEMAEKG 551
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
I P+ +++ILI CKE+ A M +G P+ ++LI L KM AL
Sbjct: 552 IKPNNVSYNILISELCKERRVRDALELSKQMLNQGLAPDIVTYNTLINGLCKMGWMHAAL 611
Query: 121 SVYNMLRYSKRSMCKALHEKIL--HILISG----KLLKDAYIVV 158
++ L +H I+ +ILIS +LL DA +++
Sbjct: 612 NLLEKLHNEN------VHPDIITYNILISWHCKVRLLDDAAMLL 649
Score = 37.4 bits (85), Expect = 1.9, Method: Composition-based stats.
Identities = 30/145 (20%), Positives = 62/145 (42%), Gaps = 3/145 (2%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I A C+ G + + L + K K + V N ++ C+ + + + +++
Sbjct: 527 LIKAMCKDGNVDRSLVLLEEMAEKGIKPNNVSYNILISELCKERRVRDALELSKQMLNQG 586
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
++PD T++ LI CK A + +H + P+ + LI K+R +A
Sbjct: 587 LAPDIVTYNTLINGLCKMGWMHAALNLLEKLHNENVHPDIITYNILISWHCKVRLLDDAA 646
Query: 121 SVYNMLRYSKRSMCKALHEKILHIL 145
+ N + ++C +I+ IL
Sbjct: 647 MLLNR---AMAAVCPVGDRRIMQIL 668
Score = 36.6 bits (83), Expect = 3.7, Method: Composition-based stats.
Identities = 22/98 (22%), Positives = 42/98 (42%), Gaps = 4/98 (4%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ CR +E + + G + + +VVL N+++ G + + +
Sbjct: 286 LLQGLCRVRQADEARAMLG----RVPELNVVLFNTVIGGCLAEGKLAEATELYETMGLKG 341
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQP 98
PD +T+ IL+ CK A R + +M +KG P
Sbjct: 342 CQPDAHTYSILMHGLCKLGRIGSAVRLLREMEKKGFAP 379
>gi|42567170|ref|NP_194410.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|332659854|gb|AEE85254.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 369
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/126 (26%), Positives = 58/126 (46%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+++ FC S ++ +AG E K DVV+ ++ C+ + + V++++ +
Sbjct: 19 LVNGFCLSNSIKDAVYVAGQMEKMGIKRDVVVDTILIDTLCKNRLVVPALEVLKRMKDRG 78
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
ISP+ T+ LI CK A R + +M K P S+LI K S+
Sbjct: 79 ISPNVVTYSSLITGLCKSGRLADAERRLHEMDSKKINPNVITFSALIDAYAKRGKLSKVD 138
Query: 121 SVYNML 126
SVY M+
Sbjct: 139 SVYKMM 144
Score = 40.0 bits (92), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 22/84 (26%), Positives = 42/84 (50%)
Query: 29 DVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYMLAYRTM 88
D+V +S++ +C + ++ ++V +++++ I D ILI CK ++ + A +
Sbjct: 12 DIVTASSLVNGFCLSNSIKDAVYVAGQMEKMGIKRDVVVDTILIDTLCKNRLVVPALEVL 71
Query: 89 VDMHRKGHQPEEELCSSLIFHLGK 112
M +G P SSLI L K
Sbjct: 72 KRMKDRGISPNVVTYSSLITGLCK 95
Score = 38.1 bits (87), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 24/106 (22%), Positives = 51/106 (48%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ C+SG + ++ + ++K +V+ ++++ AY + G + V V + + +++
Sbjct: 89 LITGLCKSGRLADAERRLHEMDSKKINPNVITFSALIDAYAKRGKLSKVDSVYKMMIQMS 148
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSL 106
I P+ T+ LI C A + + M KG P S+L
Sbjct: 149 IDPNVFTYSSLIYGLCMHNRVDEAIKMLDLMISKGCTPNVVTYSTL 194
>gi|357151708|ref|XP_003575878.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g19890-like [Brachypodium distachyon]
Length = 676
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/131 (26%), Positives = 58/131 (44%), Gaps = 11/131 (8%)
Query: 1 MISAFCRSGCFEETKQL------AGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMR 54
+I+ C+ G E +L + ++ Y V M+ YC+ G + ++
Sbjct: 296 LINGLCKIGWTERAFRLFLKLIKSSSYKPNVHTYTV-----MIGGYCKEGKLARAEMLLG 350
Query: 55 KLDELAISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMR 114
++ E ++P+ NT+ LI CKE + A+ M M R+G QP ++LI L K
Sbjct: 351 RMVEQGLAPNTNTYTTLISGHCKEGSFNCAFELMNKMRREGFQPNIYTYNALIDGLCKKG 410
Query: 115 AHSEALSVYNM 125
EA V M
Sbjct: 411 KIQEAYKVLRM 421
Score = 39.3 bits (90), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 28/123 (22%), Positives = 49/123 (39%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I CR G EE L + + D ++ +C+ G V + R++ E+
Sbjct: 191 LIVGCCRDGRMEEVDALLTVMQGQGFCLDNATCTVIVRVFCQKGRFRDVSELFRRMLEMG 250
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
P+ + I CK A+ + +M KG +P +SLI L K+ A
Sbjct: 251 TPPNVVNYTAWIDGLCKRAYVKQAFYVLEEMVAKGLKPNVYTHTSLINGLCKIGWTERAF 310
Query: 121 SVY 123
++
Sbjct: 311 RLF 313
Score = 39.3 bits (90), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 25/126 (19%), Positives = 53/126 (42%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
MI +C+ G + L G + + +++ +C+ G +M K+
Sbjct: 332 MIGGYCKEGKLARAEMLLGRMVEQGLAPNTNTYTTLISGHCKEGSFNCAFELMNKMRREG 391
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
P+ T++ LI CK+ AY+ + + +G Q ++ + +I K + AL
Sbjct: 392 FQPNIYTYNALIDGLCKKGKIQEAYKVLRMANNQGLQLDKVTYTVMITEHCKQGHITYAL 451
Query: 121 SVYNML 126
++N +
Sbjct: 452 DLFNRM 457
Score = 37.0 bits (84), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 24/124 (19%), Positives = 52/124 (41%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+IS C+ G F +L + + ++ N+++ C+ G ++ V+R +
Sbjct: 367 LISGHCKEGSFNCAFELMNKMRREGFQPNIYTYNALIDGLCKKGKIQEAYKVLRMANNQG 426
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ D T+ ++I CK+ A M G P+ ++LI + R E+
Sbjct: 427 LQLDKVTYTVMITEHCKQGHITYALDLFNRMAENGCHPDIHTYTTLIARYCQQRQMEESQ 486
Query: 121 SVYN 124
+++
Sbjct: 487 KLFD 490
>gi|224123236|ref|XP_002330266.1| predicted protein [Populus trichocarpa]
gi|222871301|gb|EEF08432.1| predicted protein [Populus trichocarpa]
Length = 590
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/113 (24%), Positives = 56/113 (49%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ CR G E ++L + +++ K D + N+++ Y + GDM+ V ++ +
Sbjct: 477 LMQGRCREGKVEAARELIEEMKSRGIKPDHISYNTLISGYSKRGDMKDAFRVRDEMLSIG 536
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKM 113
+P T++ LI+ CK + A + + +M KG P + SLI +G +
Sbjct: 537 FNPTLLTYNALIQGLCKNEEGDHAEQLLKEMISKGITPNDNTYLSLIEGIGNV 589
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/94 (23%), Positives = 51/94 (54%)
Query: 29 DVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYMLAYRTM 88
D+++ N+++ +C G+M+ +++++D++ + PD TF+ L++ C+E A +
Sbjct: 435 DLIMFNALIDGHCANGNMDRAFAMLKEMDQMKVVPDEVTFNTLMQGRCREGKVEAARELI 494
Query: 89 VDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSV 122
+M +G +P+ ++LI K +A V
Sbjct: 495 EEMKSRGIKPDHISYNTLISGYSKRGDMKDAFRV 528
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 29/107 (27%), Positives = 47/107 (43%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
MI+ C+ G ++ K+ G EA K +VV N+++ YC G +E + +
Sbjct: 197 MINVLCKEGKLKKAKEFIGLMEALGIKPNVVTYNTIIHGYCSRGRVEGARMIFDLMKCRG 256
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLI 107
+ PD T+ I CKE A + M G +P ++LI
Sbjct: 257 VKPDSYTYGSFISGMCKEGKLEEASGMLEKMKEIGLRPTAVTYNTLI 303
Score = 40.0 bits (92), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 22/98 (22%), Positives = 43/98 (43%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I +C G E + + + + K D S + C+ G +E ++ K+ E+
Sbjct: 232 IIHGYCSRGRVEGARMIFDLMKCRGVKPDSYTYGSFISGMCKEGKLEEASGMLEKMKEIG 291
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQP 98
+ P T++ LI +C + +A+ M R+G P
Sbjct: 292 LRPTAVTYNTLIDGYCNKGNLEMAFDYRDKMVREGLMP 329
Score = 38.5 bits (88), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 28/122 (22%), Positives = 53/122 (43%), Gaps = 2/122 (1%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C +G + + + + D V N+++ CR G +E+ ++ ++
Sbjct: 442 LIDGHCANGNMDRAFAMLKEMDQMKVVPDEVTFNTLMQGRCREGKVEAARELIEEMKSRG 501
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRA--HSE 118
I PD+ +++ LI + K A+R +M G P ++LI L K H+E
Sbjct: 502 IKPDHISYNTLISGYSKRGDMKDAFRVRDEMLSIGFNPTLLTYNALIQGLCKNEEGDHAE 561
Query: 119 AL 120
L
Sbjct: 562 QL 563
Score = 37.7 bits (86), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 31/146 (21%), Positives = 54/146 (36%), Gaps = 35/146 (23%)
Query: 2 ISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMH---------- 51
IS C+ G EE + + + V N+++ YC G++E
Sbjct: 268 ISGMCKEGKLEEASGMLEKMKEIGLRPTAVTYNTLIDGYCNKGNLEMAFDYRDKMVREGL 327
Query: 52 -------------------------VMRKLDELAISPDYNTFHILIKYFCKEKMYMLAYR 86
+++++ E + PD T++ILI +C+ A+
Sbjct: 328 MPTVSTYNMLIHALFLDCKMDEADGIIKEMSEKGLVPDSVTYNILINGYCRCGNVKKAFT 387
Query: 87 TMVDMHRKGHQPEEELCSSLIFHLGK 112
+M KG QP +SLI+ L K
Sbjct: 388 LHDEMISKGIQPTRVTYTSLIYVLSK 413
>gi|240254086|ref|NP_173127.4| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806394|sp|Q3EDA9.2|PPR46_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At1g16830
gi|332191383|gb|AEE29504.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 608
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/146 (24%), Positives = 65/146 (44%), Gaps = 1/146 (0%)
Query: 6 CRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDY 65
CR+GC E Q+ G V + + ++ + R+G+ + + + K+ ++ SP+
Sbjct: 223 CRTGCVSEAFQVVGLMICSGISVSVNVWSMLVSGFFRSGEPQKAVDLFNKMIQIGCSPNL 282
Query: 66 NTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVYNM 125
T+ LIK F M A+ + + +G P+ LC+ +I ++ EA V+
Sbjct: 283 VTYTSLIKGFVDLGMVDEAFTVLSKVQSEGLAPDIVLCNLMIHTYTRLGRFEEARKVFTS 342
Query: 126 LRYSKRSMCKALHEKILHIL-ISGKL 150
L K + IL L +SGK
Sbjct: 343 LEKRKLVPDQYTFASILSSLCLSGKF 368
Score = 35.0 bits (79), Expect = 9.8, Method: Compositional matrix adjust.
Identities = 22/86 (25%), Positives = 36/86 (41%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I F G +E + +++ D+VL N M+ Y R G E V L++
Sbjct: 288 LIKGFVDLGMVDEAFTVLSKVQSEGLAPDIVLCNLMIHTYTRLGRFEEARKVFTSLEKRK 347
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYR 86
+ PD TF ++ C + L R
Sbjct: 348 LVPDQYTFASILSSLCLSGKFDLVPR 373
>gi|297743431|emb|CBI36298.3| unnamed protein product [Vitis vinifera]
Length = 641
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/107 (23%), Positives = 53/107 (49%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
M+ C+ G EE ++L D + +++ N+++ YC+ GDME + +L
Sbjct: 191 MVKGLCKEGKLEEGRKLIEDRWGQGCIPNIIFYNTLIDGYCKKGDMEMANGLFIELKLKG 250
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLI 107
P T+ +I FCK+ + R +++M+ +G ++ +++I
Sbjct: 251 FLPTVETYGAIINGFCKKGDFKAIDRLLMEMNSRGLTVNVQVYNTII 297
Score = 43.1 bits (100), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 18/73 (24%), Positives = 38/73 (52%)
Query: 27 KYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYMLAYR 86
K D+V N+++ CR G + ++ + + P+ ++ LI +CK+ Y A
Sbjct: 322 KPDIVTYNTLISGSCRDGKVSEADQLLEQALGKGLMPNKFSYTPLIHAYCKQGGYDRASN 381
Query: 87 TMVDMHRKGHQPE 99
+++M +GH+P+
Sbjct: 382 WLIEMTERGHKPD 394
Score = 38.5 bits (88), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 21/81 (25%), Positives = 43/81 (53%), Gaps = 6/81 (7%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDK---YDVVLLNSMLCAYCRTGDMESVMHVMRKLD 57
++ F R+G +E ++L FE +K +V N+M+ YC+ G M+ M + ++
Sbjct: 471 LVDGFIRNGNLDEARKL---FELTIEKGMNPGIVGYNAMIKGYCKFGMMKDAMACINRMK 527
Query: 58 ELAISPDYNTFHILIKYFCKE 78
+ ++PD T+ +I + K+
Sbjct: 528 KRHLAPDEFTYSTVIDGYVKQ 548
Score = 37.0 bits (84), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 20/107 (18%), Positives = 50/107 (46%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I A+C+ G ++ + + K D+V +++ G+++ + + K+ E
Sbjct: 366 LIHAYCKQGGYDRASNWLIEMTERGHKPDLVTYGALVHGLVVAGEVDVALTIREKMLERG 425
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLI 107
+ PD ++IL+ CK+ A + +M + P+ + ++L+
Sbjct: 426 VFPDAGIYNILMSGLCKKFKLPAAKLLLAEMLDQSVLPDAFVYATLV 472
>gi|226509112|ref|NP_001141010.1| uncharacterized protein LOC100273089 [Zea mays]
gi|194702156|gb|ACF85162.1| unknown [Zea mays]
gi|413937351|gb|AFW71902.1| hypothetical protein ZEAMMB73_497690 [Zea mays]
Length = 567
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 48/99 (48%), Gaps = 3/99 (3%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
M++ +C +G + ++L D + D Y L LC RT + +V+ M + L
Sbjct: 140 MVAGYCGAGQLDAARRLVADMPVEPDAYTYNTLIRGLCGRGRTSNALAVLEDMFRRGCL- 198
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPE 99
PD T+ IL++ CK Y A + + +MH KG P+
Sbjct: 199 --PDVVTYTILLEATCKRSGYKQAMKLLDEMHDKGCAPD 235
Score = 42.7 bits (99), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 24/99 (24%), Positives = 46/99 (46%), Gaps = 8/99 (8%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C SG + +++ DV++ N+M+ YC G +++ R + ++
Sbjct: 110 LIKKLCASGRTADARRVLA-----ASGPDVMVYNAMVAGYCGAGQLDAAR---RLVADMP 161
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPE 99
+ PD T++ LI+ C A + DM R+G P+
Sbjct: 162 VEPDAYTYNTLIRGLCGRGRTSNALAVLEDMFRRGCLPD 200
Score = 40.8 bits (94), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 30/148 (20%), Positives = 64/148 (43%), Gaps = 4/148 (2%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+++A CR+G + +L + K ++ N+++ + G + + ++ ++
Sbjct: 382 LLTALCRNGEVDVAIELLHQLKDKGCSPVLISYNTVIDGLTKAGKTKEALELLDEMTSKG 441
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ PD T+ + C+E A RT + G +P L ++++ L K R A+
Sbjct: 442 LQPDIITYSTIASGLCREDRIEEAVRTFCKVQDMGIRPTAALYNAILLGLCKRRETHNAI 501
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISG 148
++ Y S C +E IL+ G
Sbjct: 502 DLF---AYMISSGCMP-NESTYTILVEG 525
Score = 40.4 bits (93), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 22/99 (22%), Positives = 46/99 (46%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ A C+ +++ +L + K D+V N +L C+ G +E M ++ L
Sbjct: 207 LLEATCKRSGYKQAMKLLDEMHDKGCAPDIVTYNVVLNGICQEGRVEDAMEFLKNLPSYG 266
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPE 99
P+ +++I++K + + A + M +M KG P
Sbjct: 267 CEPNTVSYNIVLKGLFTAERWEDAEKLMEEMAHKGCPPN 305
Score = 39.7 bits (91), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 18/69 (26%), Positives = 38/69 (55%)
Query: 11 FEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHI 70
+E+ ++L + K +VV N ++ CR G +E M V+ ++ + +P+ +++
Sbjct: 287 WEDAEKLMEEMAHKGCPPNVVTFNMLISFLCRRGLVEPAMEVLEQMPQYGCTPNSLSYNP 346
Query: 71 LIKYFCKEK 79
L+ FCK+K
Sbjct: 347 LLHAFCKQK 355
Score = 38.9 bits (89), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 19/71 (26%), Positives = 37/71 (52%)
Query: 29 DVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYMLAYRTM 88
D+V N++L A CR G+++ + ++ +L + SP +++ +I K A +
Sbjct: 375 DIVSYNTLLTALCRNGEVDVAIELLHQLKDKGCSPVLISYNTVIDGLTKAGKTKEALELL 434
Query: 89 VDMHRKGHQPE 99
+M KG QP+
Sbjct: 435 DEMTSKGLQPD 445
>gi|224097576|ref|XP_002310993.1| predicted protein [Populus trichocarpa]
gi|222850813|gb|EEE88360.1| predicted protein [Populus trichocarpa]
Length = 877
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/156 (20%), Positives = 73/156 (46%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ A C+SG + + + A+ + + N ++ + R GD+ +M+++ +
Sbjct: 664 LLKACCKSGRMQSALAVTREMSAQNIPRNTFVYNILIDGWARRGDVWEAADLMQQMKQEG 723
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ PD +T+ I CK + A +T+ +M G +P + ++LI +AL
Sbjct: 724 VQPDIHTYTSFINACCKAGDMLRATKTIQEMEALGVKPNVKTYTTLIHGWACASLPEKAL 783
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLKDAYI 156
+ ++ + KA++ ++ L+S + +AYI
Sbjct: 784 RCFEEMKLAGLKPDKAVYHCLMTSLLSRATVAEAYI 819
Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 25/98 (25%), Positives = 48/98 (48%)
Query: 27 KYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYMLAYR 86
K DVVL N+++ A+C G+M+ +H+++++ + P TF +I F + A
Sbjct: 515 KPDVVLYNNIIKAFCGMGNMDRAIHMVKEMQKKRHRPTSRTFMPIIHGFARAGEMRRALE 574
Query: 87 TMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVYN 124
M R G P ++L+ L + R +A+ + +
Sbjct: 575 IFDMMRRSGCIPTVHTFNALVLGLVEKRQMEKAVEILD 612
>gi|414587035|tpg|DAA37606.1| TPA: hypothetical protein ZEAMMB73_100135 [Zea mays]
Length = 547
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/159 (25%), Positives = 69/159 (43%), Gaps = 1/159 (0%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+IS +C++G E+ + D + + V N ++ Y + DMES + + R+L
Sbjct: 292 VISGYCKAGKMEDAMSVYNDMLESGTRPNTVTYNVLINGYGKALDMESAVRMYRQLILRH 351
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
PD TF LI +C+ A R +M QP S +I L K +EAL
Sbjct: 352 CPPDVVTFSSLIDGYCRCGQLDDAKRIWKEMGLHHIQPNVYTFSIIIHSLCKQNRSAEAL 411
Query: 121 SVYNMLRYSKRSMCKA-LHEKILHILISGKLLKDAYIVV 158
+ L + ++ ++ IL G + +A ++V
Sbjct: 412 DILRELNMRTDIAPQTFIYNPVIDILCKGGKVDEANLIV 450
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 32/122 (26%), Positives = 55/122 (45%), Gaps = 7/122 (5%)
Query: 29 DVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYMLAYRTM 88
DV N ++ CR G+ + + ++ ++ E SPD T +IL+ C+ K + +
Sbjct: 214 DVWSFNVVIKGVCRMGNFQKALELVERMTEFGCSPDTITHNILVDGLCRAKQVNKGHEVL 273
Query: 89 VDMHRKGH-QPEEELCSSLIFHLGKMRAHSEALSVYN-MLRYSKRSMCKALHEKILHILI 146
+ R G P +S+I K +A+SVYN ML R + ++LI
Sbjct: 274 RRLQRDGVCMPNAVTYTSVISGYCKAGKMEDAMSVYNDMLESGTRP-----NTVTYNVLI 328
Query: 147 SG 148
+G
Sbjct: 329 NG 330
Score = 35.8 bits (81), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 27/125 (21%), Positives = 59/125 (47%), Gaps = 3/125 (2%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLD-EL 59
+I +CR G ++ K++ + + + +V + ++ + C+ + ++R+L+
Sbjct: 362 LIDGYCRCGQLDDAKRIWKEMGLHHIQPNVYTFSIIIHSLCKQNRSAEALDILRELNMRT 421
Query: 60 AISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIF-HLGKMRAHSE 118
I+P ++ +I CK A + DM KG P++ + LI H K R E
Sbjct: 422 DIAPQTFIYNPVIDILCKGGKVDEANLIVTDMKEKGCHPDKYTYTILIIGHCMKGRI-PE 480
Query: 119 ALSVY 123
A++++
Sbjct: 481 AITLF 485
>gi|224123678|ref|XP_002319139.1| predicted protein [Populus trichocarpa]
gi|222857515|gb|EEE95062.1| predicted protein [Populus trichocarpa]
Length = 518
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 36/151 (23%), Positives = 72/151 (47%), Gaps = 3/151 (1%)
Query: 1 MISAFCR-SGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDEL 59
+++ +C G E++++ + + ++DVV SM+ Y + G + V+ + +++ ++
Sbjct: 202 VLNGWCNLIGSPRESERVWREMSKRGIRFDVVSYASMMSCYSKAGSLYRVLRLYKQMKKI 261
Query: 60 AISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEA 119
I PD ++ +I K ++ A+ M M KG P +SLI L + R EA
Sbjct: 262 GIEPDRKVYNAVIHALAKGRLVNEAFNLMKTMEEKGVAPNIVTYNSLIKPLCRARKVEEA 321
Query: 120 LSVY-NMLRYSKRSMCKALHEKILHILISGK 149
+ +ML+ + H L IL +G+
Sbjct: 322 KGAFDDMLKRCISPTIRTYH-AFLRILRTGE 351
>gi|356495758|ref|XP_003516740.1| PREDICTED: pentatricopeptide repeat-containing protein At5g42310,
mitochondrial-like [Glycine max]
Length = 554
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/113 (23%), Positives = 58/113 (51%), Gaps = 15/113 (13%)
Query: 29 DVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYMLAYRTM 88
D + NS++ + + G+++ + + +K+ + + P+ T++ LIK+ CKE +M ++
Sbjct: 255 DTHICNSIIDTFGKYGELDEALKLFKKMQKEGVRPNIVTWNSLIKWHCKEGDFMKSFHLF 314
Query: 89 VDMHRKGHQPEEELCSSLIFHLG---------------KMRAHSEALSVYNML 126
DM +G P+ ++ ++I +G K+R + E +VY +L
Sbjct: 315 TDMQEQGLYPDPKIFVTIISCMGEQGKWGIIKKYFESMKIRGNKEYGAVYAVL 367
Score = 38.1 bits (87), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 21/81 (25%), Positives = 41/81 (50%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+ +A+ + G E+ + EA+ + ++V+LN ++ A+ G M V + E
Sbjct: 402 LANAYAQQGLCEQVIMVLQIMEAEGIEPNIVMLNMLINAFGNAGRYMEAMSVYHHIKESG 461
Query: 61 ISPDYNTFHILIKYFCKEKMY 81
+SPD T+ L+K F + K +
Sbjct: 462 VSPDVVTYTTLMKAFIRAKKF 482
>gi|356547426|ref|XP_003542113.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g52620-like [Glycine max]
Length = 825
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 22/77 (28%), Positives = 44/77 (57%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ FC++G FE QL + A+ +V + N+++ A + G + ++R++ E+
Sbjct: 281 LINGFCKAGEFEAVDQLLTEMAARGLNMNVKVFNNVIDAEYKYGLVTEAAEMLRRMAEMG 340
Query: 61 ISPDYNTFHILIKYFCK 77
PD T++I+I + CK
Sbjct: 341 CGPDITTYNIMINFSCK 357
Score = 43.5 bits (101), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 26/126 (20%), Positives = 57/126 (45%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++S C+ G K L + + + DV + +++ + R G+++ + + + +
Sbjct: 456 LMSGLCKKGRIPAMKLLLSEMLDRNVQPDVYVFATLIDGFIRNGELDEAIKIFKVIIRKG 515
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ P ++ +IK FCK A + +M+ H P+E S++I K S AL
Sbjct: 516 VDPGIVGYNAMIKGFCKFGKMTDALSCLNEMNSVHHAPDEYTYSTVIDGYVKQHDMSSAL 575
Query: 121 SVYNML 126
++ +
Sbjct: 576 KMFGQM 581
Score = 43.1 bits (100), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 24/95 (25%), Positives = 41/95 (43%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
M+ C G EE ++L K VV N ++ YC+ GD++ + +L
Sbjct: 211 MVKGLCNLGKIEEGRRLIKHRWGKCCVPHVVFYNMIIDGYCKKGDLQCATRALNELKMKG 270
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKG 95
+ P T+ LI FCK + + + +M +G
Sbjct: 271 VLPTVETYGALINGFCKAGEFEAVDQLLTEMAARG 305
>gi|4455203|emb|CAB36526.1| putative protein [Arabidopsis thaliana]
gi|7269532|emb|CAB79535.1| putative protein [Arabidopsis thaliana]
Length = 439
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 34/126 (26%), Positives = 58/126 (46%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+++ FC S ++ +AG E K DVV+ ++ C+ + + V++++ +
Sbjct: 89 LVNGFCLSNSIKDAVYVAGQMEKMGIKRDVVVDTILIDTLCKNRLVVPALEVLKRMKDRG 148
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
ISP+ T+ LI CK A R + +M K P S+LI K S+
Sbjct: 149 ISPNVVTYSSLITGLCKSGRLADAERRLHEMDSKKINPNVITFSALIDAYAKRGKLSKVD 208
Query: 121 SVYNML 126
SVY M+
Sbjct: 209 SVYKMM 214
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 29/114 (25%), Positives = 56/114 (49%), Gaps = 4/114 (3%)
Query: 1 MISAFCRSGCFEETKQLA--GDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDE 58
+++ FCR CF+ + L+ G + D+V +S++ +C + ++ ++V ++++
Sbjct: 54 LVNCFCR--CFQPSSALSYLGKMMKLGIEPDIVTASSLVNGFCLSNSIKDAVYVAGQMEK 111
Query: 59 LAISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGK 112
+ I D ILI CK ++ + A + M +G P SSLI L K
Sbjct: 112 MGIKRDVVVDTILIDTLCKNRLVVPALEVLKRMKDRGISPNVVTYSSLITGLCK 165
Score = 38.1 bits (87), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 24/106 (22%), Positives = 51/106 (48%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ C+SG + ++ + ++K +V+ ++++ AY + G + V V + + +++
Sbjct: 159 LITGLCKSGRLADAERRLHEMDSKKINPNVITFSALIDAYAKRGKLSKVDSVYKMMIQMS 218
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSL 106
I P+ T+ LI C A + + M KG P S+L
Sbjct: 219 IDPNVFTYSSLIYGLCMHNRVDEAIKMLDLMISKGCTPNVVTYSTL 264
>gi|357117807|ref|XP_003560653.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At2g02150-like [Brachypodium distachyon]
Length = 692
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 31/124 (25%), Positives = 54/124 (43%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I + + G EE ++L G+ + DVV N+++ +C+ G ME ++
Sbjct: 235 LIDGYGKCGELEEVEKLVGEMRGCGCRPDVVTYNALVNCFCKFGRMERAYSYFAEMKREG 294
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ + TF + FCK M A + M KG +P E + L+ K +AL
Sbjct: 295 VMANVVTFSTFVDAFCKNGMVREAMKLFAQMRMKGMKPNEVTYTCLVDGTCKAGRLDDAL 354
Query: 121 SVYN 124
+ N
Sbjct: 355 VLTN 358
Score = 48.5 bits (114), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 56/127 (44%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
MI C+ G E + L +A DVV NS++ Y + G++E V ++ ++
Sbjct: 200 MIDFLCKEGDLAEARALLARMKAIGCSPDVVTYNSLIDGYGKCGELEEVEKLVGEMRGCG 259
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
PD T++ L+ FCK AY +M R+G S+ + K EA+
Sbjct: 260 CRPDVVTYNALVNCFCKFGRMERAYSYFAEMKREGVMANVVTFSTFVDAFCKNGMVREAM 319
Query: 121 SVYNMLR 127
++ +R
Sbjct: 320 KLFAQMR 326
Score = 39.3 bits (90), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 24/106 (22%), Positives = 47/106 (44%)
Query: 2 ISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAI 61
+ AFC++G E +L K K + V ++ C+ G ++ + + ++ + +
Sbjct: 306 VDAFCKNGMVREAMKLFAQMRMKGMKPNEVTYTCLVDGTCKAGRLDDALVLTNEMVQQGV 365
Query: 62 SPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLI 107
+ T+ +L+ CKE A M R G + E L ++LI
Sbjct: 366 PLNVVTYTVLVDGLCKEGKVAEAEDVFRLMERAGIRANELLYTTLI 411
>gi|356540307|ref|XP_003538631.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g02860-like [Glycine max]
Length = 804
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/117 (23%), Positives = 61/117 (52%)
Query: 5 FCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPD 64
+ RS F++++++ + K K D + N+++ AYCR G M+ + ++ + A+ PD
Sbjct: 659 YSRSENFQKSEEILREVLEKGMKPDRISYNTVIYAYCRNGRMKEASRIFSEMKDSALVPD 718
Query: 65 YNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEALS 121
T++ I + + M+ A + M ++G +P++ +S++ K+ EA S
Sbjct: 719 VVTYNTFIATYAADSMFAEAIDVVRYMIKQGCKPDQNTYNSIVDWYCKLDQRHEANS 775
Score = 43.5 bits (101), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 27/100 (27%), Positives = 52/100 (52%), Gaps = 7/100 (7%)
Query: 8 SGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNT 67
SG F+E K+ AG F A+ D + N+++ AY R G + M V + + E + PD +T
Sbjct: 459 SGIFKEMKR-AG-FVAERDTF-----NTLISAYSRCGSFDQAMAVYKSMLEAGVVPDLST 511
Query: 68 FHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLI 107
++ ++ + ++ + + + +M +P E SSL+
Sbjct: 512 YNAVLAALARGGLWEQSEKVLAEMEDGRCKPNELSYSSLL 551
Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 32/155 (20%), Positives = 66/155 (42%), Gaps = 1/155 (0%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTG-DMESVMHVMRKLDEL 59
+I+A+ SG + + L + ++ N +L Y + G +V ++ +
Sbjct: 199 LINAYSSSGRYRDAVNLFNKMQQDGCNPTLITYNVVLNVYGKMGMPWSNVTALVEAMRSR 258
Query: 60 AISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEA 119
++PD T++ LI + +Y A M +G P++ ++L+ GK R EA
Sbjct: 259 GVAPDLYTYNTLISCCRRGSLYEEAVHLFQQMKLEGFTPDKVTYNALLDVFGKSRRPQEA 318
Query: 120 LSVYNMLRYSKRSMCKALHEKILHILISGKLLKDA 154
+ V + + S + ++ G LL++A
Sbjct: 319 MKVLQEMEANGFSPTSVTYNSLISAYAKGGLLEEA 353
Score = 41.2 bits (95), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 19/77 (24%), Positives = 39/77 (50%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I A+CR+G +E ++ + + DVV N+ + Y + V+R + +
Sbjct: 690 VIYAYCRNGRMKEASRIFSEMKDSALVPDVVTYNTFIATYAADSMFAEAIDVVRYMIKQG 749
Query: 61 ISPDYNTFHILIKYFCK 77
PD NT++ ++ ++CK
Sbjct: 750 CKPDQNTYNSIVDWYCK 766
Score = 36.6 bits (83), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 28/127 (22%), Positives = 57/127 (44%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ F +S +E ++ + EA V NS++ AY + G +E + + ++
Sbjct: 305 LLDVFGKSRRPQEAMKVLQEMEANGFSPTSVTYNSLISAYAKGGLLEEALDLKTQMVHKG 364
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
I PD T+ L+ F K A + ++M G +P ++LI G +E +
Sbjct: 365 IKPDVFTYTTLLSGFEKAGKDDFAIQVFLEMRAVGCKPNICTFNALIKMHGNRGKFAEMM 424
Query: 121 SVYNMLR 127
V++ ++
Sbjct: 425 KVFDDIK 431
Score = 35.8 bits (81), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 23/89 (25%), Positives = 41/89 (46%), Gaps = 1/89 (1%)
Query: 35 SMLCAYCRTGDM-ESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHR 93
+ L + CR G + E +H+ +++ +PD T++ L+ F K + A + + +M
Sbjct: 268 NTLISCCRRGSLYEEAVHLFQQMKLEGFTPDKVTYNALLDVFGKSRRPQEAMKVLQEMEA 327
Query: 94 KGHQPEEELCSSLIFHLGKMRAHSEALSV 122
G P +SLI K EAL +
Sbjct: 328 NGFSPTSVTYNSLISAYAKGGLLEEALDL 356
>gi|15221300|ref|NP_177597.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75169839|sp|Q9CA58.1|PP120_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At1g74580
gi|12324819|gb|AAG52381.1|AC011765_33 hypothetical protein; 77097-79388 [Arabidopsis thaliana]
gi|332197491|gb|AEE35612.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 763
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 31/123 (25%), Positives = 55/123 (44%)
Query: 2 ISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAI 61
I C+ G + ++ G + K DV+ N+++ C+ + + K+ +
Sbjct: 258 IQGLCQRGELDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGL 317
Query: 62 SPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEALS 121
PD T++ LI +CK M LA R + D G P++ SLI L + AL+
Sbjct: 318 EPDSYTYNTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALA 377
Query: 122 VYN 124
++N
Sbjct: 378 LFN 380
Score = 42.0 bits (97), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 38/79 (48%)
Query: 29 DVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYMLAYRTM 88
DV NS+L C+T E VM + + E +P+ TF+IL++ C+ + A +
Sbjct: 495 DVYTYNSLLNGLCKTSKFEDVMETYKTMVEKGCAPNLFTFNILLESLCRYRKLDEALGLL 554
Query: 89 VDMHRKGHQPEEELCSSLI 107
+M K P+ +LI
Sbjct: 555 EEMKNKSVNPDAVTFGTLI 573
Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 30/125 (24%), Positives = 56/125 (44%), Gaps = 6/125 (4%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+++ C+ GC + L +K D+ N ++ Y ME+ + ++ + +
Sbjct: 432 LVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMLDNG 491
Query: 61 ISPDYNTFHILIKYFCKEKMY---MLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHS 117
+ PD T++ L+ CK + M Y+TMV+ KG P + L+ L + R
Sbjct: 492 VDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVE---KGCAPNLFTFNILLESLCRYRKLD 548
Query: 118 EALSV 122
EAL +
Sbjct: 549 EALGL 553
Score = 41.2 bits (95), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 28/121 (23%), Positives = 56/121 (46%), Gaps = 4/121 (3%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKY--DVVLLNSMLCAYCRTGDMESVMHVMRKLDE 58
+I+ +C+ G + +++ GD A ++ + D S++ C G+ + + +
Sbjct: 327 LIAGYCKGGMVQLAERIVGD--AVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEALG 384
Query: 59 LAISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSE 118
I P+ ++ LIK + M + A + +M KG PE + + L+ L KM S+
Sbjct: 385 KGIKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSD 444
Query: 119 A 119
A
Sbjct: 445 A 445
Score = 37.4 bits (85), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 24/134 (17%), Positives = 49/134 (36%), Gaps = 36/134 (26%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDEL- 59
++ + CR +E L + + K D V +++ +C+ GD++ + RK++E
Sbjct: 537 LLESLCRYRKLDEALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKMEEAY 596
Query: 60 -----------------------------------AISPDYNTFHILIKYFCKEKMYMLA 84
+ PD T+ +++ FCK L
Sbjct: 597 KVSSSTPTYNIIIHAFTEKLNVTMAEKLFQEMVDRCLGPDGYTYRLMVDGFCKTGNVNLG 656
Query: 85 YRTMVDMHRKGHQP 98
Y+ +++M G P
Sbjct: 657 YKFLLEMMENGFIP 670
Score = 35.8 bits (81), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 23/112 (20%), Positives = 50/112 (44%)
Query: 34 NSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHR 93
N+++ +G + V ++ + I+PD +F I +K FCK A R + +M
Sbjct: 115 NAIMSVLVDSGYFDQAHKVYMRMRDRGITPDVYSFTIRMKSFCKTSRPHAALRLLNNMSS 174
Query: 94 KGHQPEEELCSSLIFHLGKMRAHSEALSVYNMLRYSKRSMCKALHEKILHIL 145
+G + +++ + +E ++ + S S+C + K+L +L
Sbjct: 175 QGCEMNVVAYCTVVGGFYEENFKAEGYELFGKMLASGVSLCLSTFNKLLRVL 226
Score = 35.4 bits (80), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 26/122 (21%), Positives = 51/122 (41%), Gaps = 5/122 (4%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+++ C++ FE+ + K ++ N +L + CR ++ + ++ ++ +
Sbjct: 502 LLNGLCKTSKFEDVMETYKTMVEKGCAPNLFTFNILLESLCRYRKLDEALGLLEEMKNKS 561
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
++PD TF LI FCK AY M ++I H A +E L
Sbjct: 562 VNPDAVTFGTLIDGFCKNGDLDGAYTLFRKMEEAYKVSSSTPTYNIIIH-----AFTEKL 616
Query: 121 SV 122
+V
Sbjct: 617 NV 618
>gi|359482689|ref|XP_003632809.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g52620-like [Vitis vinifera]
Length = 879
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/107 (23%), Positives = 53/107 (49%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
M+ C+ G EE ++L D + +++ N+++ YC+ GDME + +L
Sbjct: 210 MVKGLCKEGKLEEGRKLIEDRWGQGCIPNIIFYNTLIDGYCKKGDMEMANGLFIELKLKG 269
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLI 107
P T+ +I FCK+ + R +++M+ +G ++ +++I
Sbjct: 270 FLPTVETYGAIINGFCKKGDFKAIDRLLMEMNSRGLTVNVQVYNTII 316
Score = 44.3 bits (103), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 31/109 (28%), Positives = 51/109 (46%), Gaps = 5/109 (4%)
Query: 27 KYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYMLAYR 86
K +VV S++ +CR GD+ + + R++ + P+ T+ ILI FCKE + A
Sbjct: 586 KPNVVTYTSLINGFCRKGDLHRSLKIFREMQACGLVPNVVTYSILIGSFCKEAKLIDAAS 645
Query: 87 TMVDMHRKGHQPEEELCSSLI--FHLGKMRAHSEALSVYNMLRYSKRSM 133
+M P + + L+ F RA SE N + +K+SM
Sbjct: 646 FFEEMLMNKCVPNDVTFNYLVNGFSKNGTRAISEK---GNEFQENKQSM 691
Score = 43.1 bits (100), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 18/73 (24%), Positives = 38/73 (52%)
Query: 27 KYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYMLAYR 86
K D+V N+++ CR G + ++ + + P+ ++ LI +CK+ Y A
Sbjct: 341 KPDIVTYNTLISGSCRDGKVSEADQLLEQALGKGLMPNKFSYTPLIHAYCKQGGYDRASN 400
Query: 87 TMVDMHRKGHQPE 99
+++M +GH+P+
Sbjct: 401 WLIEMTERGHKPD 413
Score = 38.5 bits (88), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 32/160 (20%), Positives = 73/160 (45%), Gaps = 11/160 (6%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDK---YDVVLLNSMLCAYCRTGDMESVMHVMRKLD 57
++ F R+G +E ++L FE +K +V N+M+ YC+ G M+ M + ++
Sbjct: 490 LVDGFIRNGNLDEARKL---FELTIEKGMNPGIVGYNAMIKGYCKFGMMKDAMACINRMK 546
Query: 58 ELAISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHS 117
+ ++PD T+ +I + K+ A + +M + +P +SLI +
Sbjct: 547 KRHLAPDEFTYSTVIDGYVKQHDLDGAQKMFREMVKMKCKPNVVTYTSLINGFCRKGDLH 606
Query: 118 EALSVYNMLRYSKRSMCKALHEKILHILISGKLLKDAYIV 157
+L ++ ++ C + + + ++ G K+A ++
Sbjct: 607 RSLKIFREMQ-----ACGLVPNVVTYSILIGSFCKEAKLI 641
Score = 36.6 bits (83), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 20/107 (18%), Positives = 50/107 (46%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I A+C+ G ++ + + K D+V +++ G+++ + + K+ E
Sbjct: 385 LIHAYCKQGGYDRASNWLIEMTERGHKPDLVTYGALVHGLVVAGEVDVALTIREKMLERG 444
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLI 107
+ PD ++IL+ CK+ A + +M + P+ + ++L+
Sbjct: 445 VFPDAGIYNILMSGLCKKFKLPAAKLLLAEMLDQSVLPDAFVYATLV 491
>gi|223635627|sp|Q9SZ20.2|PP339_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g26800
Length = 514
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 34/126 (26%), Positives = 58/126 (46%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+++ FC S ++ +AG E K DVV+ ++ C+ + + V++++ +
Sbjct: 164 LVNGFCLSNSIKDAVYVAGQMEKMGIKRDVVVDTILIDTLCKNRLVVPALEVLKRMKDRG 223
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
ISP+ T+ LI CK A R + +M K P S+LI K S+
Sbjct: 224 ISPNVVTYSSLITGLCKSGRLADAERRLHEMDSKKINPNVITFSALIDAYAKRGKLSKVD 283
Query: 121 SVYNML 126
SVY M+
Sbjct: 284 SVYKMM 289
Score = 45.1 bits (105), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 29/114 (25%), Positives = 56/114 (49%), Gaps = 4/114 (3%)
Query: 1 MISAFCRSGCFEETKQLA--GDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDE 58
+++ FCR CF+ + L+ G + D+V +S++ +C + ++ ++V ++++
Sbjct: 129 LVNCFCR--CFQPSSALSYLGKMMKLGIEPDIVTASSLVNGFCLSNSIKDAVYVAGQMEK 186
Query: 59 LAISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGK 112
+ I D ILI CK ++ + A + M +G P SSLI L K
Sbjct: 187 MGIKRDVVVDTILIDTLCKNRLVVPALEVLKRMKDRGISPNVVTYSSLITGLCK 240
Score = 38.5 bits (88), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 24/106 (22%), Positives = 51/106 (48%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ C+SG + ++ + ++K +V+ ++++ AY + G + V V + + +++
Sbjct: 234 LITGLCKSGRLADAERRLHEMDSKKINPNVITFSALIDAYAKRGKLSKVDSVYKMMIQMS 293
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSL 106
I P+ T+ LI C A + + M KG P S+L
Sbjct: 294 IDPNVFTYSSLIYGLCMHNRVDEAIKMLDLMISKGCTPNVVTYSTL 339
>gi|297743170|emb|CBI36037.3| unnamed protein product [Vitis vinifera]
Length = 646
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 34/127 (26%), Positives = 63/127 (49%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+IS+F R+G EE ++ + E K D++ NS++ + GD++ +++ E
Sbjct: 478 LISSFGRAGRVEEAVKIFEELENSSCKPDIISFNSLINCLGKNGDIDEAHMRFKEMREEG 537
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+SPD T+ LI+ F K +A R +M +G P + L+ L + +EA+
Sbjct: 538 LSPDVVTYSTLIECFGKTDKVEMACRLFDEMLAEGCSPNIVTYNILLDCLERSGRTAEAV 597
Query: 121 SVYNMLR 127
+Y L+
Sbjct: 598 DLYAKLK 604
Score = 36.6 bits (83), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 29/119 (24%), Positives = 50/119 (42%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
M+ + C +G E L K D V+ N++L A + + + K+ +
Sbjct: 408 MLESLCDAGKTTEALDLLSKIHEKRISTDTVMYNTVLSALGKLKKTSDLHDLYEKMKQDG 467
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEA 119
SPD +++ILI F + A + ++ +P+ +SLI LGK EA
Sbjct: 468 PSPDIFSYNILISSFGRAGRVEEAVKIFEELENSSCKPDIISFNSLINCLGKNGDIDEA 526
>gi|296081998|emb|CBI21003.3| unnamed protein product [Vitis vinifera]
Length = 837
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/123 (26%), Positives = 59/123 (47%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ C+ G E + +F + + NS++ + + G+++S + V R++ E
Sbjct: 540 IINGLCKVGQMSEARDKLKNFLEEGFIPSCMTYNSIVDGFIKEGNIDSALAVYREMCEFG 599
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+SP+ T+ LI FCK LA +T +M KG + + S+LI K R A
Sbjct: 600 VSPNVVTYTSLINGFCKSNRIDLALKTRDEMREKGLELDVTAYSALIDGFCKRRDMESAQ 659
Query: 121 SVY 123
++
Sbjct: 660 DLF 662
Score = 38.5 bits (88), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 33/135 (24%), Positives = 56/135 (41%), Gaps = 7/135 (5%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
MI CR G + + D A+ K +VV + ++ + GD E + + ++ L
Sbjct: 470 MILGHCRKGNMDMASSVFSDMLARDLKPNVVTYSILIDGNFKKGDSEKALDLFDQMLSLN 529
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
I+P TF+ +I CK A + + +G P +S++ K AL
Sbjct: 530 IAPTDFTFNTIINGLCKVGQMSEARDKLKNFLEEGFIPSCMTYNSIVDGFIKEGNIDSAL 589
Query: 121 SVYNMLRYSKRSMCK 135
+VY R MC+
Sbjct: 590 AVY-------REMCE 597
Score = 35.8 bits (81), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 22/96 (22%), Positives = 44/96 (45%)
Query: 29 DVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYMLAYRTM 88
++V+ S++ YC G+++S +++ K+ E + P+ T+ +LI+ C A
Sbjct: 324 NLVVATSLMKGYCAQGNLDSALNLFNKITEDGLFPNKVTYSVLIEGCCNSGNIEKASELY 383
Query: 89 VDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVYN 124
M G P +SL+ K EA +++
Sbjct: 384 TQMKLNGIPPSVFNVNSLLRGYLKAPLWEEASKLFD 419
Score = 35.4 bits (80), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 18/75 (24%), Positives = 39/75 (52%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ FC+S + + + K + DV ++++ +C+ DMES + +L E+
Sbjct: 610 LINGFCKSNRIDLALKTRDEMREKGLELDVTAYSALIDGFCKRRDMESAQDLFFELLEVG 669
Query: 61 ISPDYNTFHILIKYF 75
+SP+ ++ +I F
Sbjct: 670 LSPNRIVYNSMISGF 684
Score = 35.0 bits (79), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 15/73 (20%), Positives = 37/73 (50%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+++ C G E +++ + + K V++ N+++ Y R G+++ + ++ +
Sbjct: 750 LVNGLCNKGQLENARKILEEMDRKNMTPSVLIYNTLIAGYFREGNLKEAFTLHDEMLDRG 809
Query: 61 ISPDYNTFHILIK 73
+ PD T+ ILI
Sbjct: 810 LVPDDVTYDILIN 822
>gi|225452992|ref|XP_002263038.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Vitis vinifera]
Length = 644
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/130 (23%), Positives = 57/130 (43%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C G E L + + DVV+ +++ C+TG + + ++R +++
Sbjct: 150 LIKGLCLEGQIGEALHLFDKMIWEGFQPDVVIYATLINGLCKTGHTSAAIRLLRSMEKGN 209
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
PD + LI CK++ A+ +M KG P C+SL++ L +
Sbjct: 210 CQPDVVVYGTLIHSLCKDRQQTQAFNLFSEMITKGISPNIVTCNSLVYALCNLGEWKHVN 269
Query: 121 SVYNMLRYSK 130
++ N + SK
Sbjct: 270 TLLNEMVDSK 279
Score = 40.4 bits (93), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 29/110 (26%), Positives = 50/110 (45%), Gaps = 3/110 (2%)
Query: 27 KYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYMLAYR 86
++V LN ++ ++C + V+ K+ +L PD +F LIK C E A
Sbjct: 106 PHNVYTLNVLINSFCHLNRVNFAFSVLAKILKLGCQPDTASFTTLIKGLCLEGQIGEALH 165
Query: 87 TMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVYNMLRYSKRSMCKA 136
M +G QP+ + ++LI L K S A+ +LR ++ C+
Sbjct: 166 LFDKMIWEGFQPDVVIYATLINGLCKTGHTSAAI---RLLRSMEKGNCQP 212
Score = 39.3 bits (90), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 22/98 (22%), Positives = 42/98 (42%)
Query: 27 KYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYMLAYR 86
+ D +++ C G + +H+ K+ PD + LI CK A R
Sbjct: 141 QPDTASFTTLIKGLCLEGQIGEALHLFDKMIWEGFQPDVVIYATLINGLCKTGHTSAAIR 200
Query: 87 TMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVYN 124
+ M + QP+ + +LI L K R ++A ++++
Sbjct: 201 LLRSMEKGNCQPDVVVYGTLIHSLCKDRQQTQAFNLFS 238
Score = 38.1 bits (87), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 27/126 (21%), Positives = 58/126 (46%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I + C+ + L + K ++V NS++ A C G+ + V ++ ++ +
Sbjct: 220 LIHSLCKDRQQTQAFNLFSEMITKGISPNIVTCNSLVYALCNLGEWKHVNTLLNEMVDSK 279
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
I P+ + ++ CKE M A+ + M + G +P+ ++LI EA+
Sbjct: 280 IMPNAISLTTVVDALCKEGMVAQAHDVVDMMFQSGVEPDVVTYTALIDGHCLRSEMDEAV 339
Query: 121 SVYNML 126
V++M+
Sbjct: 340 KVFDMM 345
>gi|224123734|ref|XP_002330195.1| predicted protein [Populus trichocarpa]
gi|222871651|gb|EEF08782.1| predicted protein [Populus trichocarpa]
Length = 529
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/126 (23%), Positives = 58/126 (46%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I FC+ ++ G+ + + + +VV N ++ C G ++ + + ++
Sbjct: 234 LIDGFCKDENVSGAMRVFGEMQRQGLRPNVVTYNILINGLCSDGKVDEAVALRDQMVSSD 293
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ P+ T ++LI FCK K A DM ++G P ++LI K +A
Sbjct: 294 LEPNVVTHNVLINGFCKNKTVNEAINLFNDMEKQGVDPNAMTYTTLIDAYCKDGRMEDAF 353
Query: 121 SVYNML 126
++YNM+
Sbjct: 354 ALYNMM 359
Score = 48.5 bits (114), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 34/157 (21%), Positives = 69/157 (43%), Gaps = 3/157 (1%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYC---RTGDMESVMHVMRKLD 57
+++ C+ G + D + +V+ N+++ YC R G M +++++
Sbjct: 161 VVNGLCKVGKLNRAGDVIEDMKVWGVSPNVITYNTLIDGYCKMGRIGKMYKADAILKEMV 220
Query: 58 ELAISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHS 117
I P+ T++ILI FCK++ A R +M R+G +P + LI L
Sbjct: 221 AKGICPNEVTYNILIDGFCKDENVSGAMRVFGEMQRQGLRPNVVTYNILINGLCSDGKVD 280
Query: 118 EALSVYNMLRYSKRSMCKALHEKILHILISGKLLKDA 154
EA+++ + + S H +++ K + +A
Sbjct: 281 EAVALRDQMVSSDLEPNVVTHNVLINGFCKNKTVNEA 317
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/97 (24%), Positives = 48/97 (49%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ CR G + + L + +K DVV N ++ + C+ G+ + ++ ++ E
Sbjct: 374 LIAGLCRKGDVKAARSLMNEMVSKKLSADVVTYNILIDSLCKKGESRKAVKLLDEMFEKG 433
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQ 97
++P + T++ L+ +C+E A M RKG Q
Sbjct: 434 LNPSHVTYNTLMDGYCREGNLRAALIVRTRMERKGKQ 470
Score = 43.9 bits (102), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 26/98 (26%), Positives = 47/98 (47%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I A+C+ G E+ L + +V N ++ CR GD+++ +M ++
Sbjct: 339 LIDAYCKDGRMEDAFALYNMMIDRGIFPEVSTYNCLIAGLCRKGDVKAARSLMNEMVSKK 398
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQP 98
+S D T++ILI CK+ A + + +M KG P
Sbjct: 399 LSADVVTYNILIDSLCKKGESRKAVKLLDEMFEKGLNP 436
Score = 41.6 bits (96), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 23/94 (24%), Positives = 44/94 (46%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ FC++ E L D E + + + +++ AYC+ G ME + + +
Sbjct: 304 LINGFCKNKTVNEAINLFNDMEKQGVDPNAMTYTTLIDAYCKDGRMEDAFALYNMMIDRG 363
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRK 94
I P+ +T++ LI C++ A M +M K
Sbjct: 364 IFPEVSTYNCLIAGLCRKGDVKAARSLMNEMVSK 397
Score = 36.6 bits (83), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 26/114 (22%), Positives = 51/114 (44%), Gaps = 8/114 (7%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ C G +E L + + +VV N ++ +C+ + +++ +++
Sbjct: 269 LINGLCSDGKVDEAVALRDQMVSSDLEPNVVTHNVLINGFCKNKTVNEAINLFNDMEKQG 328
Query: 61 ISPDYNTFHILIKYFCK----EKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHL 110
+ P+ T+ LI +CK E + L Y M+D +G PE + LI L
Sbjct: 329 VDPNAMTYTTLIDAYCKDGRMEDAFAL-YNMMID---RGIFPEVSTYNCLIAGL 378
>gi|147845950|emb|CAN82028.1| hypothetical protein VITISV_000613 [Vitis vinifera]
Length = 790
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 34/127 (26%), Positives = 63/127 (49%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+IS+F R+G EE ++ + E K D++ NS++ + GD++ +++ E
Sbjct: 542 LISSFGRAGRVEEAVKIFEELENSSCKPDIISFNSLINCLGKNGDIDEAHMRFKEMREEG 601
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+SPD T+ LI+ F K +A R +M +G P + L+ L + +EA+
Sbjct: 602 LSPDVVTYSTLIECFGKTDKVEMACRLFDEMLAEGCSPNIVTYNILLDCLERSGRTAEAV 661
Query: 121 SVYNMLR 127
+Y L+
Sbjct: 662 DLYAKLK 668
Score = 37.0 bits (84), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 29/119 (24%), Positives = 50/119 (42%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
M+ + C +G E L K D V+ N++L A + + + K+ +
Sbjct: 472 MLESLCDAGKTTEALDLLSKIHEKRISTDTVMYNTVLSALGKLKKTSDLHDLYEKMKQDG 531
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEA 119
SPD +++ILI F + A + ++ +P+ +SLI LGK EA
Sbjct: 532 PSPDIFSYNILISSFGRAGRVEEAVKIFEELENSSCKPDIISFNSLINCLGKNGDIDEA 590
>gi|357442837|ref|XP_003591696.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355480744|gb|AES61947.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 543
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/107 (28%), Positives = 50/107 (46%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C+ + +L + K VV LNS++ YC G + ++R++
Sbjct: 217 IIDGLCKDKLVNDAYELYSEMITKRISPTVVTLNSLIYGYCIVGQFKEAFGLLREMVLKN 276
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLI 107
I+PD TF+IL+ CKE A + M ++G P+ SSL+
Sbjct: 277 INPDVYTFNILVDALCKEGKIKEAKSGIAVMMKEGVMPDVVTYSSLM 323
Score = 42.4 bits (98), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 23/97 (23%), Positives = 45/97 (46%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C+SG +L + D++ NS++ A C+ ++ + +++K+ +
Sbjct: 377 LIDGLCKSGRISYAWELVDEMRDSGQPADIITYNSLIDALCKNHHVDKAIALVKKIKDQG 436
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQ 97
I D T++ILI CK+ A D+ KG+
Sbjct: 437 IQLDMYTYNILIDGLCKQGRLKDAQVIFQDLLIKGYN 473
Score = 35.8 bits (81), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 18/81 (22%), Positives = 40/81 (49%)
Query: 28 YDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYMLAYRT 87
++ V +++ C+ G+ + + ++R+++ +S D + +I CK+K+ AY
Sbjct: 174 FNQVSYGTLINGLCKIGETRAALQMLRQIEGKLVSTDVVMYSTIIDGLCKDKLVNDAYEL 233
Query: 88 MVDMHRKGHQPEEELCSSLIF 108
+M K P +SLI+
Sbjct: 234 YSEMITKRISPTVVTLNSLIY 254
>gi|449487636|ref|XP_004157725.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At1g19290-like [Cucumis
sativus]
Length = 885
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/106 (25%), Positives = 53/106 (50%)
Query: 2 ISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAI 61
I+ C SG + + D K + + NS++ +C+ G + + ++R++++ +
Sbjct: 579 INGLCISGLMTDAYDVFSDMLRKGFVPNNFVYNSLIGGFCKVGKLNEALKLVREMNKRGL 638
Query: 62 SPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLI 107
PD T +++I CK+ LA T +DM R G P+ ++LI
Sbjct: 639 LPDIFTVNMIICGLCKQGRMKLAIETFMDMCRMGLSPDIVTYNTLI 684
Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 40/168 (23%), Positives = 75/168 (44%), Gaps = 14/168 (8%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I FC+ G E +L + + D+ +N ++C C+ G M+ + + +
Sbjct: 613 LIGGFCKVGKLNEALKLVREMNKRGLLPDIFTVNMIICGLCKQGRMKLAIETFMDMCRMG 672
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+SPD T++ LI +CK A M+ M G +P+ + I +R + A+
Sbjct: 673 LSPDIVTYNTLIDGYCKAFDVGGADDLMMKMSDSGWEPDLTTYNIRIHGYCTVRKINRAV 732
Query: 121 S----------VYNMLRYSKRSMCKALHEKILH--ILISGKLLKDAYI 156
V N + Y+ +M A+ IL ++++ KLLK A++
Sbjct: 733 MILEELISVGIVPNTVTYN--TMINAVCNVILDHAMILTAKLLKMAFV 778
Score = 35.4 bits (80), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 33/130 (25%), Positives = 53/130 (40%), Gaps = 6/130 (4%)
Query: 1 MISAFCRSGCF---EETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLD 57
+I FCR G E + G F + D Y N ++ A C G +H++ +
Sbjct: 263 LILEFCRKGWTRIGEALLHVMGKFRCEPDVYS---YNIVINANCLKGQSSYALHLLNLMI 319
Query: 58 ELAISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHS 117
E P TF +I FCKE LA + ++ G + + +I K R S
Sbjct: 320 ENGCKPSIATFCTIIDAFCKEGNVELARKYFDEIEDMGLSQNTIVYNIMISGYVKARDIS 379
Query: 118 EALSVYNMLR 127
+A ++ +R
Sbjct: 380 QANLLFEEMR 389
>gi|449433161|ref|XP_004134366.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
mitochondrial-like [Cucumis sativus]
Length = 917
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/106 (25%), Positives = 53/106 (50%)
Query: 2 ISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAI 61
I+ C SG + + D K + + NS++ +C+ G + + ++R++++ +
Sbjct: 610 INGLCISGLMTDAYDVFSDMLRKGFVPNNFVYNSLIGGFCKVGKLNEALKLVREMNKRGL 669
Query: 62 SPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLI 107
PD T +++I CK+ LA T +DM R G P+ ++LI
Sbjct: 670 LPDIFTVNMIICGLCKQGRMKLAIETFMDMCRMGLSPDIVTYNTLI 715
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 40/168 (23%), Positives = 75/168 (44%), Gaps = 14/168 (8%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I FC+ G E +L + + D+ +N ++C C+ G M+ + + +
Sbjct: 644 LIGGFCKVGKLNEALKLVREMNKRGLLPDIFTVNMIICGLCKQGRMKLAIETFMDMCRMG 703
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+SPD T++ LI +CK A M+ M G +P+ + I +R + A+
Sbjct: 704 LSPDIVTYNTLIDGYCKAFDVGGADDLMMKMSDSGWEPDLTTYNIRIHGYCTVRKINRAV 763
Query: 121 S----------VYNMLRYSKRSMCKALHEKILH--ILISGKLLKDAYI 156
V N + Y+ +M A+ IL ++++ KLLK A++
Sbjct: 764 MILEELISVGIVPNTVTYN--TMINAVCNVILDHAMILTAKLLKMAFV 809
Score = 35.4 bits (80), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 33/130 (25%), Positives = 53/130 (40%), Gaps = 6/130 (4%)
Query: 1 MISAFCRSGCF---EETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLD 57
+I FCR G E + G F + D Y N ++ A C G +H++ +
Sbjct: 294 LILEFCRKGWTRIGEALLHVMGKFRCEPDVYS---YNIVINANCLKGQSSYALHLLNLMI 350
Query: 58 ELAISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHS 117
E P TF +I FCKE LA + ++ G + + +I K R S
Sbjct: 351 ENGCKPSIATFCTIIDAFCKEGNVELARKYFDEIEDMGLSQNTIVYNIMISGYVKARDIS 410
Query: 118 EALSVYNMLR 127
+A ++ +R
Sbjct: 411 QANLLFEEMR 420
>gi|413918448|gb|AFW58380.1| hypothetical protein ZEAMMB73_073366 [Zea mays]
Length = 414
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 39/159 (24%), Positives = 73/159 (45%), Gaps = 1/159 (0%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+IS +C++G ++ + D + + V N ++ Y + DMES + + +L +
Sbjct: 159 VISGYCKAGRMKDAFSVYNDMLQSGTRPNTVTYNVLINGYGKALDMESAVRMYWQLILHS 218
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
PD TF+ LI +C+ A R ++M + QP S +I L +EAL
Sbjct: 219 CPPDVVTFNSLIDGYCRCGQLDDAMRIWMEMGQHHIQPNVYTFSIIIHSLCTQNRSAEAL 278
Query: 121 SVYNMLRYSKRSMCKA-LHEKILHILISGKLLKDAYIVV 158
S+ L + + ++ I+ IL G + +A ++V
Sbjct: 279 SLLRELNMRADIVPQTFIYNPIIDILCKGGKVDEANLIV 317
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 32/122 (26%), Positives = 56/122 (45%), Gaps = 7/122 (5%)
Query: 29 DVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYMLAYRTM 88
DV N ++ CR G+++ + ++ ++ E SPD T +IL+ C+ K + +
Sbjct: 81 DVWSFNVVIKGVCRVGNLQKALELVERMTEFGCSPDTITQNILVDGLCRVKQVNKGHEVL 140
Query: 89 VDMHRKGH-QPEEELCSSLIFHLGKMRAHSEALSVYN-MLRYSKRSMCKALHEKILHILI 146
+ R G P +S+I K +A SVYN ML+ R + ++LI
Sbjct: 141 RRLQRDGVCMPNVVTYTSVISGYCKAGRMKDAFSVYNDMLQSGTRP-----NTVTYNVLI 195
Query: 147 SG 148
+G
Sbjct: 196 NG 197
>gi|224127568|ref|XP_002329310.1| predicted protein [Populus trichocarpa]
gi|222870764|gb|EEF07895.1| predicted protein [Populus trichocarpa]
Length = 593
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 73/159 (45%), Gaps = 2/159 (1%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ A C+SG E+ +++ + E K D+ N+++ YC+ G + V +++
Sbjct: 212 LLHACCKSGDVEKAEKVLSEMELKCVFPDLFTYNTLISLYCKKGMHYEALSVQDRMEMAG 271
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
ISPD T++ LI FC+E A + D+ K P +SLI ++ EAL
Sbjct: 272 ISPDIFTYNSLIYGFCREGRMREAVQLFRDI--KDVTPNHVTYTSLIDGYCRVNDLDEAL 329
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLKDAYIVVK 159
+ ++ + IL L G L+DA I++
Sbjct: 330 RLKEVMSEKGLYPTVITYNSILRKLCEGGRLRDANILLN 368
Score = 45.1 bits (105), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 28/118 (23%), Positives = 54/118 (45%), Gaps = 5/118 (4%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I FCR G E QL D + + V S++ YCR D++ + + + E
Sbjct: 282 LIYGFCREGRMREAVQLFRDIKDVTPNH--VTYTSLIDGYCRVNDLDEALRLKEVMSEKG 339
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIF---HLGKMRA 115
+ P T++ +++ C+ A + +M + +P+ C++LI +G MR+
Sbjct: 340 LYPTVITYNSILRKLCEGGRLRDANILLNEMSERKIEPDNVTCNTLINAYCKIGDMRS 397
Score = 45.1 bits (105), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 27/98 (27%), Positives = 42/98 (42%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ C G + L + + + D V N+++ AYC+ GDM S + V K+
Sbjct: 350 ILRKLCEGGRLRDANILLNEMSERKIEPDNVTCNTLINAYCKIGDMRSALKVKDKMVGAG 409
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQP 98
+ D T+ LI FCK K A + M G P
Sbjct: 410 LKLDQFTYKALIHGFCKAKEIDKAKELLFGMMDAGFSP 447
Score = 43.5 bits (101), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 49/93 (52%), Gaps = 6/93 (6%)
Query: 34 NSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHR 93
N +L A C++GD+E V+ +++ + PD T++ LI +CK+ M+ A M
Sbjct: 210 NVLLHACCKSGDVEKAEKVLSEMELKCVFPDLFTYNTLISLYCKKGMHYEALSVQDRMEM 269
Query: 94 KGHQPEEELCSSLIFHL---GKMRAHSEALSVY 123
G P+ +SLI+ G+MR EA+ ++
Sbjct: 270 AGISPDIFTYNSLIYGFCREGRMR---EAVQLF 299
>gi|359476104|ref|XP_003631789.1| PREDICTED: pentatricopeptide repeat-containing protein At3g54980,
mitochondrial-like [Vitis vinifera]
Length = 877
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/123 (26%), Positives = 59/123 (47%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ C+ G E + +F + + NS++ + + G+++S + V R++ E
Sbjct: 580 IINGLCKVGQMSEARDKLKNFLEEGFIPSCMTYNSIVDGFIKEGNIDSALAVYREMCEFG 639
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+SP+ T+ LI FCK LA +T +M KG + + S+LI K R A
Sbjct: 640 VSPNVVTYTSLINGFCKSNRIDLALKTRDEMREKGLELDVTAYSALIDGFCKRRDMESAQ 699
Query: 121 SVY 123
++
Sbjct: 700 DLF 702
Score = 38.1 bits (87), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 33/135 (24%), Positives = 56/135 (41%), Gaps = 7/135 (5%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
MI CR G + + D A+ K +VV + ++ + GD E + + ++ L
Sbjct: 510 MILGHCRKGNMDMASSVFSDMLARDLKPNVVTYSILIDGNFKKGDSEKALDLFDQMLSLN 569
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
I+P TF+ +I CK A + + +G P +S++ K AL
Sbjct: 570 IAPTDFTFNTIINGLCKVGQMSEARDKLKNFLEEGFIPSCMTYNSIVDGFIKEGNIDSAL 629
Query: 121 SVYNMLRYSKRSMCK 135
+VY R MC+
Sbjct: 630 AVY-------REMCE 637
Score = 35.8 bits (81), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 22/96 (22%), Positives = 44/96 (45%)
Query: 29 DVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYMLAYRTM 88
++V+ S++ YC G+++S +++ K+ E + P+ T+ +LI+ C A
Sbjct: 364 NLVVATSLMKGYCAQGNLDSALNLFNKITEDGLFPNKVTYSVLIEGCCNSGNIEKASELY 423
Query: 89 VDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVYN 124
M G P +SL+ K EA +++
Sbjct: 424 TQMKLNGIPPSVFNVNSLLRGYLKAPLWEEASKLFD 459
Score = 35.4 bits (80), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 18/75 (24%), Positives = 39/75 (52%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ FC+S + + + K + DV ++++ +C+ DMES + +L E+
Sbjct: 650 LINGFCKSNRIDLALKTRDEMREKGLELDVTAYSALIDGFCKRRDMESAQDLFFELLEVG 709
Query: 61 ISPDYNTFHILIKYF 75
+SP+ ++ +I F
Sbjct: 710 LSPNRIVYNSMISGF 724
>gi|225447562|ref|XP_002269867.1| PREDICTED: pentatricopeptide repeat-containing protein At4g26680,
mitochondrial-like [Vitis vinifera]
Length = 616
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 19/79 (24%), Positives = 45/79 (56%)
Query: 29 DVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYMLAYRTM 88
+V LN ++CA+C+ G +E + V ++++ + SP +++ LI +C + + +
Sbjct: 313 NVYTLNMVMCAFCKWGKLEKAIEVFKRMETMGFSPTITSYNTLIAGYCNKGLLNSGMKLK 372
Query: 89 VDMHRKGHQPEEELCSSLI 107
+ M + G +P++ ++LI
Sbjct: 373 ILMEKNGVRPDDVTFNTLI 391
Score = 44.3 bits (103), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 38/161 (23%), Positives = 67/161 (41%), Gaps = 13/161 (8%)
Query: 4 AFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISP 63
AFC+ G E+ ++ E + N+++ YC G + S M + +++ + P
Sbjct: 323 AFCKWGKLEKAIEVFKRMETMGFSPTITSYNTLIAGYCNKGLLNSGMKLKILMEKNGVRP 382
Query: 64 DYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKM-------RAH 116
D TF+ LI FC+ A + +M P ++LI ++ R H
Sbjct: 383 DDVTFNTLINGFCRGGKLHEANKIFSEMKANDVVPNTITYNTLINGYSQVGNSEMGGRLH 442
Query: 117 SEALSVYNMLRYSKRSMCKALHEKILHILISGKLLKDAYIV 157
E MLR ++ + IL + + G+ K AY+V
Sbjct: 443 DE------MLRNGIKADILTYNALILGLCMEGRTKKAAYLV 477
Score = 38.1 bits (87), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 36/152 (23%), Positives = 64/152 (42%), Gaps = 5/152 (3%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ + + G E +L + K D++ N+++ C G + +++++LD
Sbjct: 425 LINGYSQVGNSEMGGRLHDEMLRNGIKADILTYNALILGLCMEGRTKKAAYLVKELDREN 484
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ P+ +TF LI C K A++ M R G P LI K A+
Sbjct: 485 LVPNSSTFSALITGQCVRKNSERAFQLYKSMIRSGCHPNYHTFKMLISTFCKNEDFDGAV 544
Query: 121 SVYNMLRYSKRSMCK---ALHEKILHILISGK 149
V + S+RS+ L E + +SGK
Sbjct: 545 EVVREM--SERSIAPDSDTLSELCRGLWLSGK 574
Score = 37.4 bits (85), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 24/107 (22%), Positives = 47/107 (43%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ FCR G E ++ + +A + + N+++ Y + G+ E + ++
Sbjct: 390 LINGFCRGGKLHEANKIFSEMKANDVVPNTITYNTLINGYSQVGNSEMGGRLHDEMLRNG 449
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLI 107
I D T++ LI C E A + ++ R+ P S+LI
Sbjct: 450 IKADILTYNALILGLCMEGRTKKAAYLVKELDRENLVPNSSTFSALI 496
>gi|255764587|gb|ACU33853.1| PPR1 protein [Capsicum annuum]
Length = 577
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 34/127 (26%), Positives = 58/127 (45%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I A C+ + L + + K ++ NS++ C+ G E V ++ ++ L
Sbjct: 209 VIDALCKDINLDAAINLLNEMKQKNIPPNIFTYNSLIDGLCKLGQWEKVKTLLSEMVNLN 268
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
I+P+ +TF ILI CKE A M M KG +P+ S+++ A
Sbjct: 269 INPNVHTFSILIDGLCKEGKVEDADEVMRHMIEKGVEPDIITYSAIMDGYCLRGQVDRAR 328
Query: 121 SVYNMLR 127
V+N+LR
Sbjct: 329 RVFNVLR 335
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/128 (22%), Positives = 64/128 (50%), Gaps = 1/128 (0%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C+ G E+ ++ K + D++ ++++ YC G ++ V L +
Sbjct: 279 LIDGLCKEGKVEDADEVMRHMIEKGVEPDIITYSAIMDGYCLRGQVDRARRVFNVLRDKG 338
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
I P+ ++ ILI +CK+K A + ++ +KG +P+ S+++ L ++ +A
Sbjct: 339 IKPNIFSYSILINGYCKKKNLAKAMQLFGEISQKGLKPDTVTYSTILHGLIEVGRIGDAK 398
Query: 121 SVYN-MLR 127
+++ MLR
Sbjct: 399 KIFDEMLR 406
Score = 43.5 bits (101), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 35/154 (22%), Positives = 63/154 (40%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C+ G +E+ K L + +V + ++ C+ G +E VMR + E
Sbjct: 244 LIDGLCKLGQWEKVKTLLSEMVNLNINPNVHTFSILIDGLCKEGKVEDADEVMRHMIEKG 303
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ PD T+ ++ +C A R + KG +P S LI K + ++A+
Sbjct: 304 VEPDIITYSAIMDGYCLRGQVDRARRVFNVLRDKGIKPNIFSYSILINGYCKKKNLAKAM 363
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLKDA 154
++ + + ILH LI + DA
Sbjct: 364 QLFGEISQKGLKPDTVTYSTILHGLIEVGRIGDA 397
Score = 36.2 bits (82), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 15/81 (18%), Positives = 36/81 (44%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ + + G EE L E + ++ ++ C+ + + KL +
Sbjct: 419 LLFGYFKYGLVEEAMLLFSKLERNREDTNISFYTVVINGLCKNDRVREAHAIFEKLPSIG 478
Query: 61 ISPDYNTFHILIKYFCKEKMY 81
+ PD T++++I FC+E ++
Sbjct: 479 LIPDVRTYNVMITGFCREGLF 499
>gi|357141282|ref|XP_003572167.1| PREDICTED: pentatricopeptide repeat-containing protein At5g12100,
mitochondrial-like [Brachypodium distachyon]
Length = 686
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/112 (21%), Positives = 54/112 (48%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+++ C+ G + +++ V+ N+++ YC+ GD+E + +++
Sbjct: 334 LLNGLCKDGKISKAEEVLQTLVNSGLLQTTVIYNTLINGYCQIGDLEGAFSIFQQMKSRL 393
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGK 112
I PD+ T++ LI K + A+ +++M + G P E ++LI G+
Sbjct: 394 IRPDHITYNALINGLGKVERITEAHDLVIEMEKNGVNPSVETFNTLIDAYGR 445
Score = 38.9 bits (89), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 22/99 (22%), Positives = 43/99 (43%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+++AFC++G E + D K + N+++ AY G + + K+
Sbjct: 474 IVNAFCKNGKILEAVAILDDMFIKDVLPGAQVYNAIIDAYIECGSTDQAFMLAEKMKSSG 533
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPE 99
+ P T+++LIK CK+ A + + G P+
Sbjct: 534 VPPSIVTYNLLIKGLCKQSQISEAEELLDSLRNYGLAPD 572
Score = 37.4 bits (85), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 18/78 (23%), Positives = 38/78 (48%)
Query: 30 VVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYMLAYRTMV 89
V N+++ AY R G +E ++ + E + P+ ++ ++ FCK + A +
Sbjct: 433 VETFNTLIDAYGRAGQLEKCFIILSDMQEKGLKPNVVSYGSIVNAFCKNGKILEAVAILD 492
Query: 90 DMHRKGHQPEEELCSSLI 107
DM K P ++ +++I
Sbjct: 493 DMFIKDVLPGAQVYNAII 510
>gi|294883698|ref|XP_002771030.1| pentatricopeptide repeat-containing protein, putative [Perkinsus
marinus ATCC 50983]
gi|239874236|gb|EER02846.1| pentatricopeptide repeat-containing protein, putative [Perkinsus
marinus ATCC 50983]
Length = 994
Score = 50.1 bits (118), Expect = 3e-04, Method: Composition-based stats.
Identities = 30/106 (28%), Positives = 52/106 (49%), Gaps = 7/106 (6%)
Query: 29 DVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYMLAYRTM 88
+ V N+++ A R+G ME V + R++DE I PD T+ ++K +C A+ +
Sbjct: 551 NTVSFNTIMDACARSGSMERVSDIFREMDEQGIEPDIITYSTVVKGYCLAGDVDTAFSVL 610
Query: 89 VDMH-------RKGHQPEEELCSSLIFHLGKMRAHSEALSVYNMLR 127
DM RK P+E + +SL+ K +AL + + +R
Sbjct: 611 RDMSGVSRRGGRKKFAPDEIMYNSLLDGCAKQHRVDQALQLLDEMR 656
Score = 40.0 bits (92), Expect = 0.28, Method: Composition-based stats.
Identities = 25/105 (23%), Positives = 47/105 (44%), Gaps = 3/105 (2%)
Query: 27 KYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYMLAYR 86
+ DVV N+++ + + G+M MR++ E P+ T++ L+ + K +
Sbjct: 284 RLDVVSFNTVMKGHLKQGNMRQARKTMREMQEAGFPPNVITYNELLHSMVQGKDKRGIWE 343
Query: 87 TMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVYNMLRYSKR 131
+ +M G P + CS L L + +HS A V + +R
Sbjct: 344 VVEEMKANGLPPNKVTCSIL---LKALTSHSHASDVVRTMELVER 385
Score = 40.0 bits (92), Expect = 0.33, Method: Composition-based stats.
Identities = 31/141 (21%), Positives = 64/141 (45%), Gaps = 9/141 (6%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ A RSG E + + + + + D++ ++++ YC GD+++ V+R + ++
Sbjct: 558 IMDACARSGSMERVSDIFREMDEQGIEPDIITYSTVVKGYCLAGDVDTAFSVLRDMSGVS 617
Query: 61 -------ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKM 113
+PD ++ L+ K+ A + + +M G P S L+ LG+
Sbjct: 618 RRGGRKKFAPDEIMYNSLLDGCAKQHRVDQALQLLDEMRANGVAPSNYTLSILVKLLGRA 677
Query: 114 RAHSEALSVYNMLR--YSKRS 132
R EA ++ L YS R+
Sbjct: 678 RRLLEAFNMVEDLSTAYSFRA 698
>gi|356526063|ref|XP_003531639.1| PREDICTED: pentatricopeptide repeat-containing protein At4g26680,
mitochondrial-like isoform 1 [Glycine max]
gi|356526065|ref|XP_003531640.1| PREDICTED: pentatricopeptide repeat-containing protein At4g26680,
mitochondrial-like isoform 2 [Glycine max]
Length = 522
Score = 50.1 bits (118), Expect = 3e-04, Method: Composition-based stats.
Identities = 28/99 (28%), Positives = 53/99 (53%)
Query: 29 DVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYMLAYRTM 88
+V LN ++ AYC G+++ ++ K+ ++ +SP+ +F+ LI +C + ++ LA +
Sbjct: 224 NVYTLNMIIRAYCMLGEVQKGFDMLEKMMDMGLSPNVVSFNTLISGYCNKGLFGLALKVK 283
Query: 89 VDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVYNMLR 127
M G QP ++LI K R EA V+N ++
Sbjct: 284 SLMVENGVQPNVVTFNTLINGFCKERKLHEANRVFNEMK 322
Score = 41.6 bits (96), Expect = 0.12, Method: Composition-based stats.
Identities = 34/130 (26%), Positives = 56/130 (43%), Gaps = 1/130 (0%)
Query: 29 DVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYMLAYRTM 88
+VV N+++ YC G + V + E + P+ TF+ LI FCKE+ A R
Sbjct: 259 NVVSFNTLISGYCNKGLFGLALKVKSLMVENGVQPNVVTFNTLINGFCKERKLHEANRVF 318
Query: 89 VDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVY-NMLRYSKRSMCKALHEKILHILIS 147
+M P ++L+ G++ + VY M+R ++ + IL +
Sbjct: 319 NEMKVANVDPSVVTYNTLLNGYGQVGDSEMGVRVYEEMMRNGLKADILTYNALILGLCKD 378
Query: 148 GKLLKDAYIV 157
GK K A V
Sbjct: 379 GKTKKAAGFV 388
Score = 40.4 bits (93), Expect = 0.27, Method: Composition-based stats.
Identities = 31/114 (27%), Positives = 53/114 (46%), Gaps = 12/114 (10%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVV----LLNSMLCAYCRTGDMESVMHVMRKL 56
+I C+ G +TK+ AG F + DK ++V ++++ C + E + R +
Sbjct: 371 LILGLCKDG---KTKKAAG-FVRELDKENLVPNASTFSALITGQCVRNNSERAFLIYRSM 426
Query: 57 DELAISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPE----EELCSSL 106
SP+ TF +LI FCK + + A + + DM + P+ ELC L
Sbjct: 427 VRSGCSPNGQTFQMLISAFCKNEDFDGAVQVLRDMLGRLMSPDLSTMSELCDGL 480
Score = 37.0 bits (84), Expect = 2.6, Method: Composition-based stats.
Identities = 24/85 (28%), Positives = 43/85 (50%), Gaps = 8/85 (9%)
Query: 27 KYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFC----KEKMYM 82
K D++ N+++ C+ G + +R+LD+ + P+ +TF LI C E+ ++
Sbjct: 362 KADILTYNALILGLCKDGKTKKAAGFVRELDKENLVPNASTFSALITGQCVRNNSERAFL 421
Query: 83 LAYRTMVDMHRKGHQPEEELCSSLI 107
+ YR+MV R G P + LI
Sbjct: 422 I-YRSMV---RSGCSPNGQTFQMLI 442
>gi|294883700|ref|XP_002771031.1| pentatricopeptide repeat-containing protein, putative [Perkinsus
marinus ATCC 50983]
gi|239874237|gb|EER02847.1| pentatricopeptide repeat-containing protein, putative [Perkinsus
marinus ATCC 50983]
Length = 941
Score = 50.1 bits (118), Expect = 3e-04, Method: Composition-based stats.
Identities = 30/106 (28%), Positives = 52/106 (49%), Gaps = 7/106 (6%)
Query: 29 DVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYMLAYRTM 88
+ V N+++ A R+G ME V + R++DE I PD T+ ++K +C A+ +
Sbjct: 561 NTVSFNTIMDACARSGSMERVSDIFREMDEQGIEPDIITYSTVVKGYCLAGDVDTAFSVL 620
Query: 89 VDMH-------RKGHQPEEELCSSLIFHLGKMRAHSEALSVYNMLR 127
DM RK P+E + +SL+ K +AL + + +R
Sbjct: 621 RDMSGVSRRGGRKKFAPDEIMYNSLLDGCAKQHRVDQALQLLDEMR 666
Score = 40.0 bits (92), Expect = 0.33, Method: Composition-based stats.
Identities = 31/141 (21%), Positives = 64/141 (45%), Gaps = 9/141 (6%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ A RSG E + + + + + D++ ++++ YC GD+++ V+R + ++
Sbjct: 568 IMDACARSGSMERVSDIFREMDEQGIEPDIITYSTVVKGYCLAGDVDTAFSVLRDMSGVS 627
Query: 61 -------ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKM 113
+PD ++ L+ K+ A + + +M G P S L+ LG+
Sbjct: 628 RRGGRKKFAPDEIMYNSLLDGCAKQHRVDQALQLLDEMRANGVAPSNYTLSILVKLLGRA 687
Query: 114 RAHSEALSVYNMLR--YSKRS 132
R EA ++ L YS R+
Sbjct: 688 RRLLEAFNMVEDLSTAYSFRA 708
Score = 37.7 bits (86), Expect = 1.4, Method: Composition-based stats.
Identities = 24/103 (23%), Positives = 46/103 (44%), Gaps = 3/103 (2%)
Query: 29 DVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYMLAYRTM 88
+VV N+++ + + G+M MR++ E P+ T++ L+ + K + +
Sbjct: 296 NVVSFNTVMKGHLKQGNMRQARKTMREMQEAGFPPNVITYNELLHSMVQGKDKRGIWEVV 355
Query: 89 VDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVYNMLRYSKR 131
+M G P + CS L L + +HS A V + +R
Sbjct: 356 EEMKANGLPPNKVTCSIL---LKALTSHSHASDVVRTMELVER 395
>gi|297797589|ref|XP_002866679.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297312514|gb|EFH42938.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 915
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 31/126 (24%), Positives = 63/126 (50%), Gaps = 1/126 (0%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ +C+ G E+ + E++ + + N ++ YC+ ++ M V+ K+ E
Sbjct: 399 LINGYCKRGMIEDALDVVELMESRNLRPNTRTYNELIKGYCKR-NVHKAMGVLNKMLERK 457
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ PD T++ LI C+ + AYR + M+ +G P+ +S+I L K + EA
Sbjct: 458 VLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDPWTYTSMIDSLCKSKRVEEAC 517
Query: 121 SVYNML 126
+++ L
Sbjct: 518 DLFDSL 523
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 33/125 (26%), Positives = 60/125 (48%), Gaps = 4/125 (3%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKY--DVVLLNSMLCAYCRTGDMESVMHVMRKLDE 58
++++ R G +E KQ+ E DK ++ N M+ YC+ G++E + + E
Sbjct: 189 LLNSLARFGLVDEMKQVY--MEMLEDKVCPNIYTYNKMVNGYCKVGNVEEANQYVSMIVE 246
Query: 59 LAISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSE 118
+ PD+ T+ LI +C+ K A++ +M KG + E + LI L R E
Sbjct: 247 AGLDPDFFTYTSLIMGYCQRKDLDSAFKVFKEMPLKGCRRNEVAYTHLIHGLCVERRIDE 306
Query: 119 ALSVY 123
A+ ++
Sbjct: 307 AMDLF 311
Score = 44.7 bits (104), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 33/126 (26%), Positives = 56/126 (44%), Gaps = 16/126 (12%)
Query: 19 GDFEAKYDKYDVVL----------LNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTF 68
GDF+ Y ++ +L + + YCR G ++ ++ K+ E +SPD T+
Sbjct: 616 GDFDHAYRRFQQMLSSGTKPDAHTYTTFIQTYCREGRLQDAEDMVAKMKENGVSPDLFTY 675
Query: 69 HILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHL-----GKMRAHSEALSVY 123
LIK + A+ + MH G +P + SLI HL GK++ + V
Sbjct: 676 SSLIKGYGDLGRTNSAFVVLKRMHDTGCEPSQHTFLSLIKHLLEMKYGKVKGGEPGVCVM 735
Query: 124 -NMLRY 128
NM+ +
Sbjct: 736 SNMMEF 741
Score = 38.9 bits (89), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 35/131 (26%), Positives = 63/131 (48%), Gaps = 4/131 (3%)
Query: 29 DVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYMLAYRTM 88
DVV NS++ CR+G+ +S ++ +++ + PD T+ +I CK K A
Sbjct: 461 DVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDPWTYTSMIDSLCKSKRVEEACDLF 520
Query: 89 VDMHRKGHQPEEELCSSLIFHLGKMRAHSEA-LSVYNMLRYSKRSMCKALH-EKILHILI 146
+ +K P + ++LI K +EA L + ML SK + +L ++H L
Sbjct: 521 DSLEQKDVIPNVVMYTALIDGYCKAGKVNEAHLMLEKML--SKNCLPNSLTFNALIHGLC 578
Query: 147 SGKLLKDAYIV 157
+ LK+A ++
Sbjct: 579 TDGKLKEATLL 589
>gi|297797974|ref|XP_002866871.1| EMB2453 [Arabidopsis lyrata subsp. lyrata]
gi|297312707|gb|EFH43130.1| EMB2453 [Arabidopsis lyrata subsp. lyrata]
Length = 561
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 34/126 (26%), Positives = 61/126 (48%), Gaps = 6/126 (4%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTG---DMESVMHVMRKLD 57
++ AF +SG ++ L D + DV N ++ AY + G +ME+V+ MR +
Sbjct: 214 LLRAFAQSGKVDQVNALFKDLDMSPVSPDVYTFNGVMDAYGKNGMIKEMEAVLTRMRSNE 273
Query: 58 ELAISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHS 117
PD TF++LI + K++ + +T + R +P +S+I + GK R
Sbjct: 274 ---CKPDIITFNVLIDSYGKKQEFEKMEQTFKSLMRSKEKPTLPTFNSMIINYGKARMID 330
Query: 118 EALSVY 123
+A V+
Sbjct: 331 KAEWVF 336
>gi|449435418|ref|XP_004135492.1| PREDICTED: pentatricopeptide repeat-containing protein At1g13040,
mitochondrial-like [Cucumis sativus]
gi|449494962|ref|XP_004159696.1| PREDICTED: pentatricopeptide repeat-containing protein At1g13040,
mitochondrial-like [Cucumis sativus]
Length = 514
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 20/73 (27%), Positives = 42/73 (57%)
Query: 27 KYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYMLAYR 86
K++ ++ NS++ +C++G + + + + + PD T++IL+ +FC M LA +
Sbjct: 216 KFNNLIFNSLMSGFCKSGRISKALAIKSFMSKHGCEPDLITYNILLNFFCDGLMLELAGK 275
Query: 87 TMVDMHRKGHQPE 99
+M M R G +P+
Sbjct: 276 SMKKMERIGMEPD 288
Score = 43.5 bits (101), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 29/119 (24%), Positives = 56/119 (47%)
Query: 29 DVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYMLAYRTM 88
D++ +++ +C+T +E V R + E+ ISPD +++ LI CK A
Sbjct: 392 DLIFYTTVVDYFCKTRKIEMAQGVFRDMIEIGISPDVVSYNALINGLCKASKVSEAMLLY 451
Query: 89 VDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVYNMLRYSKRSMCKALHEKILHILIS 147
+M +G P+E +I L + + S A V++ + ++ K L E ++ + S
Sbjct: 452 EEMQIRGCYPDEVTFKLIIGGLLRKKELSLACQVWDQMMEKGYTLDKFLSETLIKAIRS 510
Score = 41.2 bits (95), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 51/97 (52%), Gaps = 4/97 (4%)
Query: 1 MISAFCRSGCFEETKQLA-GDFEAKYD-KYDVVLLNSMLCAYCRTGDMESVMHVMRKLDE 58
++S FC+SG +K LA F +K+ + D++ N +L +C +E M+K++
Sbjct: 225 LMSGFCKSG--RISKALAIKSFMSKHGCEPDLITYNILLNFFCDGLMLELAGKSMKKMER 282
Query: 59 LAISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKG 95
+ + PD +++ L+K CK AY+ M M KG
Sbjct: 283 IGMEPDVYSYNQLLKGLCKANRLDKAYKLMNTMWEKG 319
Score = 40.4 bits (93), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 36/152 (23%), Positives = 65/152 (42%), Gaps = 5/152 (3%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I A C+S + +L + K DV +++ A+ G +++ + +
Sbjct: 329 VIGALCKSFATRKAYRLFEEMGQKDVAPDVGTFATLIKAFLIEGSPHIAKGLLQTMTQTV 388
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ PD + ++ YFCK + +A DM G P+ ++LI L K SEA
Sbjct: 389 LIPDLIFYTTVVDYFCKTRKIEMAQGVFRDMIEIGISPDVVSYNALINGLCKASKVSEA- 447
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLK 152
ML Y + + +++ LI G LL+
Sbjct: 448 ----MLLYEEMQIRGCYPDEVTFKLIIGGLLR 475
>gi|48716316|dbj|BAD22929.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|48717088|dbj|BAD22861.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
Length = 933
Score = 50.1 bits (118), Expect = 3e-04, Method: Composition-based stats.
Identities = 31/123 (25%), Positives = 58/123 (47%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ +CR G +A A+ DVV N+++ +CR G +++ V+ + E
Sbjct: 175 LIAGYCRVGDTPAALSVADRMTAQGLPMDVVGYNTLVAGFCRAGQVDAARGVLDMMKEAG 234
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ P+ T+ I Y+C+ K A+ M R G + S+L+ L + SEA
Sbjct: 235 VDPNVATYTPFIVYYCRTKGVEEAFDLYEGMVRNGVLLDVVTLSALVAGLCRDGRFSEAY 294
Query: 121 SVY 123
+++
Sbjct: 295 ALF 297
Score = 45.1 bits (105), Expect = 0.010, Method: Composition-based stats.
Identities = 31/129 (24%), Positives = 60/129 (46%), Gaps = 4/129 (3%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+++ CR+G + LA D DV+ N+++ YCR GD + + V ++
Sbjct: 141 LLAGLCRNGQVDAAAALA-DRGGGIHALDVIGWNTLIAGYCRVGDTPAALSVADRMTAQG 199
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRK-GHQPEEELCSSLIFHLGKMRAHSEA 119
+ D ++ L+ FC+ + A R ++DM ++ G P + I + + + EA
Sbjct: 200 LPMDVVGYNTLVAGFCRAGQ-VDAARGVLDMMKEAGVDPNVATYTPFIVYYCRTKGVEEA 258
Query: 120 LSVYN-MLR 127
+Y M+R
Sbjct: 259 FDLYEGMVR 267
Score = 40.4 bits (93), Expect = 0.25, Method: Composition-based stats.
Identities = 29/123 (23%), Positives = 59/123 (47%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I A C++ +E +Q+ + E K +VV +S++ + + G ++ R + E
Sbjct: 385 LIDALCKAHNVDEAEQVLLEMEEKSISPNVVTFSSVINGFVKRGLLDKATEYKRMMKERG 444
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
I+P+ T+ LI F K + A DM +G + + + SL+ L + EA+
Sbjct: 445 INPNVVTYGTLIDGFFKFQGQDAALEVYHDMLCEGVKVNKFIVDSLVNGLRQNGKIEEAM 504
Query: 121 SVY 123
+++
Sbjct: 505 ALF 507
Score = 38.1 bits (87), Expect = 1.4, Method: Composition-based stats.
Identities = 26/122 (21%), Positives = 48/122 (39%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+++ FCR+G + + + + +V + YCRT +E + +
Sbjct: 210 LVAGFCRAGQVDAARGVLDMMKEAGVDPNVATYTPFIVYYCRTKGVEEAFDLYEGMVRNG 269
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ D T L+ C++ + AY +M + G P +LI L K E L
Sbjct: 270 VLLDVVTLSALVAGLCRDGRFSEAYALFREMDKVGAAPNHVTYCTLIDSLAKAGRGKELL 329
Query: 121 SV 122
S+
Sbjct: 330 SL 331
Score = 36.6 bits (83), Expect = 3.2, Method: Composition-based stats.
Identities = 17/71 (23%), Positives = 35/71 (49%)
Query: 2 ISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAI 61
I+ C G F+E K + K D N+M+ ++CR G+ + ++ ++ +I
Sbjct: 561 INCLCMLGKFKEAKSFLTEMRNMGLKPDQSTYNTMIVSHCRKGETAKALKLLHEMKMSSI 620
Query: 62 SPDYNTFHILI 72
P+ T++ L+
Sbjct: 621 KPNLITYNTLV 631
Score = 35.8 bits (81), Expect = 6.2, Method: Composition-based stats.
Identities = 23/89 (25%), Positives = 41/89 (46%)
Query: 36 MLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKG 95
++ A C+ +++ V+ +++E +ISP+ TF +I F K + A M +G
Sbjct: 385 LIDALCKAHNVDEAEQVLLEMEEKSISPNVVTFSSVINGFVKRGLLDKATEYKRMMKERG 444
Query: 96 HQPEEELCSSLIFHLGKMRAHSEALSVYN 124
P +LI K + AL VY+
Sbjct: 445 INPNVVTYGTLIDGFFKFQGQDAALEVYH 473
>gi|218191848|gb|EEC74275.1| hypothetical protein OsI_09511 [Oryza sativa Indica Group]
Length = 933
Score = 50.1 bits (118), Expect = 3e-04, Method: Composition-based stats.
Identities = 31/123 (25%), Positives = 58/123 (47%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ +CR G +A A+ DVV N+++ +CR G +++ V+ + E
Sbjct: 175 LIAGYCRVGDTPAALSVADRMTAQGLPMDVVGYNTLVAGFCRAGQVDAARGVLDMMKEAG 234
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ P+ T+ I Y+C+ K A+ M R G + S+L+ L + SEA
Sbjct: 235 VDPNVATYTPFIVYYCRTKGVEEAFDLYEGMVRNGVLLDVVTLSALVAGLCRDGRFSEAY 294
Query: 121 SVY 123
+++
Sbjct: 295 ALF 297
Score = 45.1 bits (105), Expect = 0.010, Method: Composition-based stats.
Identities = 31/129 (24%), Positives = 60/129 (46%), Gaps = 4/129 (3%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+++ CR+G + LA D DV+ N+++ YCR GD + + V ++
Sbjct: 141 LLAGLCRNGQVDAAAALA-DRGGGIHALDVIGWNTLIAGYCRVGDTPAALSVADRMTAQG 199
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRK-GHQPEEELCSSLIFHLGKMRAHSEA 119
+ D ++ L+ FC+ + A R ++DM ++ G P + I + + + EA
Sbjct: 200 LPMDVVGYNTLVAGFCRAGQ-VDAARGVLDMMKEAGVDPNVATYTPFIVYYCRTKGVEEA 258
Query: 120 LSVYN-MLR 127
+Y M+R
Sbjct: 259 FDLYEGMVR 267
Score = 40.8 bits (94), Expect = 0.21, Method: Composition-based stats.
Identities = 29/123 (23%), Positives = 59/123 (47%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I A C++ +E +Q+ + E K +VV +S++ + + G ++ R + E
Sbjct: 385 LIDALCKAHNVDEAEQVLLEMEEKSISPNVVTFSSVINGFVKRGLLDKATEYKRMMKERG 444
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
I+P+ T+ LI F K + A DM +G + + + SL+ L + EA+
Sbjct: 445 INPNVVTYGTLIDGFFKFQGQDAALEVYHDMLCEGVEVNKFIVDSLVNGLRQNGKIEEAM 504
Query: 121 SVY 123
+++
Sbjct: 505 ALF 507
Score = 37.4 bits (85), Expect = 2.1, Method: Composition-based stats.
Identities = 26/122 (21%), Positives = 48/122 (39%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+++ FCR+G + + + + +V + YCRT +E + +
Sbjct: 210 LVAGFCRAGQVDAARGVLDMMKEAGVDPNVATYTPFIVYYCRTKGVEEAFDLYEGMVRNG 269
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ D T L+ C++ + AY +M + G P +LI L K E L
Sbjct: 270 VLLDVVTLSALVAGLCRDGRFSEAYALFREMDKVGAVPNHVTYCTLIDSLAKAGRGKELL 329
Query: 121 SV 122
S+
Sbjct: 330 SL 331
Score = 36.6 bits (83), Expect = 3.7, Method: Composition-based stats.
Identities = 17/71 (23%), Positives = 36/71 (50%)
Query: 2 ISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAI 61
I+ C G F+E K + + K D N+M+ ++CR G+ + ++ ++ +I
Sbjct: 561 INCLCILGKFKEAKSILTEMRNMGLKPDQSTYNTMIVSHCRKGETAKALKLLHEMKMSSI 620
Query: 62 SPDYNTFHILI 72
P+ T++ L+
Sbjct: 621 KPNLITYNTLV 631
Score = 35.8 bits (81), Expect = 6.2, Method: Composition-based stats.
Identities = 23/89 (25%), Positives = 41/89 (46%)
Query: 36 MLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKG 95
++ A C+ +++ V+ +++E +ISP+ TF +I F K + A M +G
Sbjct: 385 LIDALCKAHNVDEAEQVLLEMEEKSISPNVVTFSSVINGFVKRGLLDKATEYKRMMKERG 444
Query: 96 HQPEEELCSSLIFHLGKMRAHSEALSVYN 124
P +LI K + AL VY+
Sbjct: 445 INPNVVTYGTLIDGFFKFQGQDAALEVYH 473
>gi|115449175|ref|NP_001048367.1| Os02g0793200 [Oryza sativa Japonica Group]
gi|113537898|dbj|BAF10281.1| Os02g0793200 [Oryza sativa Japonica Group]
gi|215704904|dbj|BAG94932.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 473
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 35/154 (22%), Positives = 66/154 (42%)
Query: 2 ISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAI 61
++A CR G + + D DVV N++L A+CR +E+ + VM ++ E +
Sbjct: 30 LAALCRGGSLAAAESVLVDAIRLGLPPDVVTYNTLLAAHCRAAGLEAGLVVMGRMREAGV 89
Query: 62 SPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEALS 121
PD T++ LI + + + A +M R G P+ + L+ L + +A
Sbjct: 90 EPDAVTYNSLIAGAARRGLPIHALDLFDEMLRSGIAPDSWSYNPLMHCLFRSGHPEDAYR 149
Query: 122 VYNMLRYSKRSMCKALHEKILHILISGKLLKDAY 155
V+ + + C + +L + +AY
Sbjct: 150 VFADMAEKGIAPCDTTYNTLLDGMFRAGYAMNAY 183
Score = 44.3 bits (103), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 36/135 (26%), Positives = 61/135 (45%), Gaps = 9/135 (6%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDEL- 59
+++A CR+ E + G + D V NS++ R G +H + DE+
Sbjct: 64 LLAAHCRAAGLEAGLVVMGRMREAGVEPDAVTYNSLIAGAARRG---LPIHALDLFDEML 120
Query: 60 --AISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHS 117
I+PD +++ L+ + AYR DM KG P + ++L+ G RA
Sbjct: 121 RSGIAPDSWSYNPLMHCLFRSGHPEDAYRVFADMAEKGIAPCDTTYNTLLD--GMFRA-G 177
Query: 118 EALSVYNMLRYSKRS 132
A++ Y M RY +R+
Sbjct: 178 YAMNAYRMFRYLQRA 192
Score = 43.1 bits (100), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 31/126 (24%), Positives = 52/126 (41%)
Query: 32 LLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYMLAYRTMVDM 91
LLN L A CR G + + V+ L + PD T++ L+ C+ M M
Sbjct: 25 LLNVCLAALCRGGSLAAAESVLVDAIRLGLPPDVVTYNTLLAAHCRAAGLEAGLVVMGRM 84
Query: 92 HRKGHQPEEELCSSLIFHLGKMRAHSEALSVYNMLRYSKRSMCKALHEKILHILISGKLL 151
G +P+ +SLI + AL +++ + S + + ++H L
Sbjct: 85 REAGVEPDAVTYNSLIAGAARRGLPIHALDLFDEMLRSGIAPDSWSYNPLMHCLFRSGHP 144
Query: 152 KDAYIV 157
+DAY V
Sbjct: 145 EDAYRV 150
>gi|449436014|ref|XP_004135789.1| PREDICTED: pentatricopeptide repeat-containing protein At1g07740,
mitochondrial-like [Cucumis sativus]
Length = 460
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 39/158 (24%), Positives = 71/158 (44%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
MI + + G +E+ L + K + VV NS L CR G+M++ + + + + E
Sbjct: 192 MIKGWIKKGGWEQACNLFDEMLEKGVQPSVVTYNSFLGVLCRKGEMDTALCLFKNMTEKG 251
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
P+ T+ +L++ +C Y A + M DM G + L+ HLGK E
Sbjct: 252 HHPNAVTYALLMEGWCFIGKYKEAKKLMFDMEFHGCKLRPVNYGVLMTHLGKTGNIDEME 311
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLKDAYIVV 158
S+ N ++ + + +++ L + DAY V+
Sbjct: 312 SLLNEMKKRRLKPDVVTYNILVNYLCKEGKVGDAYKVL 349
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 50/99 (50%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ +C G ++E K+L D E K V ++ +TG+++ + ++ ++ +
Sbjct: 262 LMEGWCFIGKYKEAKKLMFDMEFHGCKLRPVNYGVLMTHLGKTGNIDEMESLLNEMKKRR 321
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPE 99
+ PD T++IL+ Y CKE AY+ +V M G P
Sbjct: 322 LKPDVVTYNILVNYLCKEGKVGDAYKVLVKMQVGGCDPN 360
Score = 39.7 bits (91), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 25/112 (22%), Positives = 52/112 (46%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+++ ++G +E + L + + + K DVV N ++ C+ G + V+ K+
Sbjct: 297 LMTHLGKTGNIDEMESLLNEMKKRRLKPDVVTYNILVNYLCKEGKVGDAYKVLVKMQVGG 356
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGK 112
P+ T+ ++I +C + A + + M GH P + +SL+ L K
Sbjct: 357 CDPNAATYRMMIDGYCNAGDFDGAMKILNAMLMSGHYPHLKTFASLVVGLLK 408
>gi|334187332|ref|NP_001190970.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|332661695|gb|AEE87095.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 510
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 34/126 (26%), Positives = 61/126 (48%), Gaps = 6/126 (4%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTG---DMESVMHVMRKLD 57
++ AF +SG ++ L D + DV N ++ AY + G +ME+V+ MR +
Sbjct: 214 LLRAFAQSGKVDQVNALFKDLDMSPVSPDVYTFNGVMDAYGKNGMIKEMEAVLTRMRSNE 273
Query: 58 ELAISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHS 117
PD TF++LI + K++ + +T + R +P +S+I + GK R
Sbjct: 274 ---CKPDIITFNVLIDSYGKKQEFEKMEQTFKSLMRSKEKPTLPTFNSMIINYGKARMID 330
Query: 118 EALSVY 123
+A V+
Sbjct: 331 KAEWVF 336
>gi|222637475|gb|EEE67607.1| hypothetical protein OsJ_25160 [Oryza sativa Japonica Group]
Length = 225
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/120 (24%), Positives = 57/120 (47%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ +C+SG +E+ ++ + K + DVV+ ++ + C+ G + VM +
Sbjct: 70 LLQGYCKSGRWEDVGKVFVEMSEKGIEPDVVMYTGLIDSLCKVGKAKKAHGVMDMMVRRG 129
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ P+ T+++LI CKE A + M KG P+ ++LI L + EA+
Sbjct: 130 LEPNVVTYNVLINCMCKEGSVKEAIGVLKKMSEKGVAPDVVTYNTLIKGLSDVLEMDEAM 189
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/122 (27%), Positives = 57/122 (46%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C + ++ +L G+ + +VV+ +S+L YC++G E V V ++ E
Sbjct: 35 LIRGLCDAAEVDKAVELMGEMCESGIEPNVVVYSSLLQGYCKSGRWEDVGKVFVEMSEKG 94
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
I PD + LI CK A+ M M R+G +P + LI + K + EA+
Sbjct: 95 IEPDVVMYTGLIDSLCKVGKAKKAHGVMDMMVRRGLEPNVVTYNVLINCMCKEGSVKEAI 154
Query: 121 SV 122
V
Sbjct: 155 GV 156
Score = 43.5 bits (101), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 23/100 (23%), Positives = 50/100 (50%)
Query: 27 KYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYMLAYR 86
+ DVV +++ C +++ + +M ++ E I P+ + L++ +CK + +
Sbjct: 26 RADVVTYGTLIRGLCDAAEVDKAVELMGEMCESGIEPNVVVYSSLLQGYCKSGRWEDVGK 85
Query: 87 TMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVYNML 126
V+M KG +P+ + + LI L K+ +A V +M+
Sbjct: 86 VFVEMSEKGIEPDVVMYTGLIDSLCKVGKAKKAHGVMDMM 125
>gi|357502217|ref|XP_003621397.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355496412|gb|AES77615.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 550
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/107 (26%), Positives = 50/107 (46%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I++ C+ + QL + K DVV NS++ +C G ++ + ++
Sbjct: 205 IINSLCKDKAVSDAYQLYSEMITKRISPDVVTFNSLILGFCVVGQLKEAFGLFHEMVLKN 264
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLI 107
I+PD TF IL+ CK+ A + M ++G P+ SSL+
Sbjct: 265 INPDVYTFSILVDALCKDGNITRAKNMLAVMMKQGVIPDVVTYSSLM 311
Score = 44.7 bits (104), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 29/113 (25%), Positives = 51/113 (45%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ A C+ G K + + DVV +S++ YC ++ HV + L
Sbjct: 275 LVDALCKDGNITRAKNMLAVMMKQGVIPDVVTYSSLMDGYCLVNEVNKAKHVFSTMSRLG 334
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKM 113
++P ++++I+I K KM A +M KG P+ +SLI L K+
Sbjct: 335 VAPHAHSYNIMINGLGKIKMVDEALSLFKEMCCKGIAPDTVTYNSLIDGLCKL 387
Score = 40.4 bits (93), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 26/123 (21%), Positives = 55/123 (44%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ C +G +E A D V +++ C+ G+ + + +++K++
Sbjct: 135 LINGICLNGKLKEALHFHDHVIALGFHLDQVSYRTLINGLCKIGETRAALQMLKKIEGKL 194
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
++ D ++I+I CK+K AY+ +M K P+ +SLI + EA
Sbjct: 195 VNTDVVMYNIIINSLCKDKAVSDAYQLYSEMITKRISPDVVTFNSLILGFCVVGQLKEAF 254
Query: 121 SVY 123
++
Sbjct: 255 GLF 257
Score = 40.0 bits (92), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 27/119 (22%), Positives = 50/119 (42%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C+ G QL + D++ NS++ C+ ++ + +++K+ +
Sbjct: 380 LIDGLCKLGRISYAWQLVDEMHNNGIPADILTYNSLIDVLCKNHHIDKAIALVKKIKDQG 439
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEA 119
I P T++ILI CK A D+ KG+ + +I L K +EA
Sbjct: 440 IQPSMYTYNILIDGLCKGGRLKNAQDVFQDLLIKGYSVNAWTYNIMINGLCKEGLFNEA 498
Score = 38.1 bits (87), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 27/107 (25%), Positives = 45/107 (42%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ C+ G Q+ E K DVV+ N ++ + C+ + + ++
Sbjct: 170 LINGLCKIGETRAALQMLKKIEGKLVNTDVVMYNIIINSLCKDKAVSDAYQLYSEMITKR 229
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLI 107
ISPD TF+ LI FC A+ +M K P+ S L+
Sbjct: 230 ISPDVVTFNSLILGFCVVGQLKEAFGLFHEMVLKNINPDVYTFSILV 276
>gi|357437447|ref|XP_003588999.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355478047|gb|AES59250.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 458
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 49/99 (49%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ AFC+ G EE K + K K DVV +S++ YC ++ + + + E
Sbjct: 248 LVDAFCKEGKIEEAKNVLNTMMEKDLKSDVVAYSSLMNGYCLVNEVFKAQSIFKTMAERE 307
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPE 99
+S D +++I+I FCK KM A + +M K P+
Sbjct: 308 LSYDVRSYNIMINEFCKMKMVDEAIKLFEEMPLKQIFPD 346
Score = 36.2 bits (82), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 15/50 (30%), Positives = 29/50 (58%)
Query: 29 DVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKE 78
+VV +++ +C G +E + + +K+ I+P+ TF+ L+ FCKE
Sbjct: 206 NVVTYTALIDGFCVVGKLEEALGLFKKMISENINPNVYTFNGLVDAFCKE 255
>gi|255549371|ref|XP_002515739.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223545176|gb|EEF46686.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 613
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/107 (25%), Positives = 50/107 (46%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ +C+ G +E ++ E K + D+ N++ C+ E + + E
Sbjct: 396 LINGYCKKGMIDEALRMQDVMEKKGFENDIFTYNTIAGGLCKLNRHEEAKRWLFTMVEKG 455
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLI 107
+ P+ +F I+I CKE + A R DM +KG +P ++LI
Sbjct: 456 VDPNAVSFTIMIDIHCKEGNLVEAERVFQDMKKKGEKPNVVTYNTLI 502
>gi|47497141|dbj|BAD19190.1| zinc finger (CCCH-type) protein-like [Oryza sativa Japonica Group]
gi|47497588|dbj|BAD19658.1| zinc finger (CCCH-type) protein-like [Oryza sativa Japonica Group]
Length = 462
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 35/154 (22%), Positives = 66/154 (42%)
Query: 2 ISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAI 61
++A CR G + + D DVV N++L A+CR +E+ + VM ++ E +
Sbjct: 19 LAALCRGGSLAAAESVLVDAIRLGLPPDVVTYNTLLAAHCRAAGLEAGLVVMGRMREAGV 78
Query: 62 SPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEALS 121
PD T++ LI + + + A +M R G P+ + L+ L + +A
Sbjct: 79 EPDAVTYNSLIAGAARRGLPIHALDLFDEMLRSGIAPDSWSYNPLMHCLFRSGHPEDAYR 138
Query: 122 VYNMLRYSKRSMCKALHEKILHILISGKLLKDAY 155
V+ + + C + +L + +AY
Sbjct: 139 VFADMAEKGIAPCDTTYNTLLDGMFRAGYAMNAY 172
Score = 44.3 bits (103), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 36/135 (26%), Positives = 61/135 (45%), Gaps = 9/135 (6%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDEL- 59
+++A CR+ E + G + D V NS++ R G +H + DE+
Sbjct: 53 LLAAHCRAAGLEAGLVVMGRMREAGVEPDAVTYNSLIAGAARRG---LPIHALDLFDEML 109
Query: 60 --AISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHS 117
I+PD +++ L+ + AYR DM KG P + ++L+ G RA
Sbjct: 110 RSGIAPDSWSYNPLMHCLFRSGHPEDAYRVFADMAEKGIAPCDTTYNTLLD--GMFRA-G 166
Query: 118 EALSVYNMLRYSKRS 132
A++ Y M RY +R+
Sbjct: 167 YAMNAYRMFRYLQRA 181
Score = 43.1 bits (100), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 31/126 (24%), Positives = 52/126 (41%)
Query: 32 LLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYMLAYRTMVDM 91
LLN L A CR G + + V+ L + PD T++ L+ C+ M M
Sbjct: 14 LLNVCLAALCRGGSLAAAESVLVDAIRLGLPPDVVTYNTLLAAHCRAAGLEAGLVVMGRM 73
Query: 92 HRKGHQPEEELCSSLIFHLGKMRAHSEALSVYNMLRYSKRSMCKALHEKILHILISGKLL 151
G +P+ +SLI + AL +++ + S + + ++H L
Sbjct: 74 REAGVEPDAVTYNSLIAGAARRGLPIHALDLFDEMLRSGIAPDSWSYNPLMHCLFRSGHP 133
Query: 152 KDAYIV 157
+DAY V
Sbjct: 134 EDAYRV 139
>gi|302806733|ref|XP_002985098.1| hypothetical protein SELMODRAFT_121399 [Selaginella moellendorffii]
gi|300147308|gb|EFJ13973.1| hypothetical protein SELMODRAFT_121399 [Selaginella moellendorffii]
Length = 659
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 36/126 (28%), Positives = 65/126 (51%), Gaps = 2/126 (1%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ F R+G + ++A + A+ DV+ N++L AYC+ GD++ + R ++
Sbjct: 30 LITGFSRAGNSKMVLEIANEMLARRFSPDVITHNTILKAYCQIGDLDRALSHFRG--KMW 87
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
SP T+ ILI C+ + AY+ + +M +K P+ + + LI L KM A
Sbjct: 88 CSPTAFTYCILIHGLCQCQRIDEAYQLLDEMIQKDCHPDAAVYNCLIAGLCKMGKIDAAR 147
Query: 121 SVYNML 126
+V M+
Sbjct: 148 NVLKMM 153
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 45/99 (45%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+++ C SG +EE ++ K DVV NS++ +C+ M+ ++ +
Sbjct: 238 VVACLCESGKYEEAGKILEKMIEKKCGPDVVTYNSLMDGFCKVSKMDEAERLLEDMVGRR 297
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPE 99
+P T+ LI F + AYR M DM + G P+
Sbjct: 298 CAPTVITYTTLIGGFSRADRLADAYRVMEDMFKAGISPD 336
Score = 40.8 bits (94), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 19/99 (19%), Positives = 45/99 (45%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ C+ G + + + + DV+ S++ C+T ++ +M K+ E
Sbjct: 133 LIAGLCKMGKIDAARNVLKMMLERSCVPDVITYTSLIVGCCQTNALDEARKLMEKMKESG 192
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPE 99
++PD ++ L+ CK+ + + +M G +P+
Sbjct: 193 LTPDTVAYNALLNGLCKQNQLEEVSKLLEEMVEAGREPD 231
Score = 38.5 bits (88), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 23/98 (23%), Positives = 42/98 (42%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+++ C+ EE +L + + D N+++ C +G E ++ K+ E
Sbjct: 203 LLNGLCKQNQLEEVSKLLEEMVEAGREPDTFSYNTVVACLCESGKYEEAGKILEKMIEKK 262
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQP 98
PD T++ L+ FCK A R + DM + P
Sbjct: 263 CGPDVVTYNSLMDGFCKVSKMDEAERLLEDMVGRRCAP 300
Score = 36.6 bits (83), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 22/99 (22%), Positives = 41/99 (41%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ C++ E+ + K DV S++ +C+ M++ + + +
Sbjct: 547 LINGLCKTKRVEDAINVLDVMLEKGCVPDVATYTSLIDGFCKINKMDAAYQCFKTMRDSG 606
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPE 99
PD ++ILI FC+ A M M KG P+
Sbjct: 607 CEPDKLAYNILISGFCQSGNVEKAIEVMQLMLEKGCNPD 645
Score = 35.8 bits (81), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 27/126 (21%), Positives = 53/126 (42%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ FC+ +E ++L D + V+ +++ + R + VM + +
Sbjct: 273 LMDGFCKVSKMDEAERLLEDMVGRRCAPTVITYTTLIGGFSRADRLADAYRVMEDMFKAG 332
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
ISPD T++ L+ CK A+ + M K P+ S L+ L K+ +A
Sbjct: 333 ISPDLVTYNCLLDGLCKAGKLEEAHELLEVMVEKDCAPDVVTYSILVNGLCKLGKVDDAR 392
Query: 121 SVYNML 126
+ M+
Sbjct: 393 LLLEMM 398
Score = 35.4 bits (80), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 26/125 (20%), Positives = 52/125 (41%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ C++G EE +L K DVV + ++ C+ G ++ ++ + E
Sbjct: 343 LLDGLCKAGKLEEAHELLEVMVEKDCAPDVVTYSILVNGLCKLGKVDDARLLLEMMLERG 402
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
P+ TF+ +I FCK ++ + M P+ S+LI K +A
Sbjct: 403 CQPNLVTFNTMIDGFCKAGKVDEGHKVLELMKEVSCTPDVVTYSTLIDGYCKANRMQDAF 462
Query: 121 SVYNM 125
++ +
Sbjct: 463 AILGI 467
>gi|359482557|ref|XP_002277683.2| PREDICTED: pentatricopeptide repeat-containing protein At5g39710
[Vitis vinifera]
Length = 990
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 34/127 (26%), Positives = 63/127 (49%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+IS+F R+G EE ++ + E K D++ NS++ + GD++ +++ E
Sbjct: 325 LISSFGRAGRVEEAVKIFEELENSSCKPDIISFNSLINCLGKNGDIDEAHMRFKEMREEG 384
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+SPD T+ LI+ F K +A R +M +G P + L+ L + +EA+
Sbjct: 385 LSPDVVTYSTLIECFGKTDKVEMACRLFDEMLAEGCSPNIVTYNILLDCLERSGRTAEAV 444
Query: 121 SVYNMLR 127
+Y L+
Sbjct: 445 DLYAKLK 451
Score = 36.6 bits (83), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 29/119 (24%), Positives = 50/119 (42%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
M+ + C +G E L K D V+ N++L A + + + K+ +
Sbjct: 255 MLESLCDAGKTTEALDLLSKIHEKRISTDTVMYNTVLSALGKLKKTSDLHDLYEKMKQDG 314
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEA 119
SPD +++ILI F + A + ++ +P+ +SLI LGK EA
Sbjct: 315 PSPDIFSYNILISSFGRAGRVEEAVKIFEELENSSCKPDIISFNSLINCLGKNGDIDEA 373
>gi|356560325|ref|XP_003548443.1| PREDICTED: pentatricopeptide repeat-containing protein At3g61520,
mitochondrial-like [Glycine max]
Length = 746
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 34/122 (27%), Positives = 54/122 (44%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+ISAFC Q + + D V+ S++ C G M V+ KL
Sbjct: 469 LISAFCGVNNINRAMQCFEEMLSSGCSPDAVVYYSLISGLCIAGRMNDASVVVSKLKLAG 528
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
S D + +++LI FCK+K Y + +M G +P+ ++LI +LGK + A
Sbjct: 529 FSLDRSCYNVLISGFCKKKKLERVYELLTEMEETGVKPDTITYNTLISYLGKTGDFATAS 588
Query: 121 SV 122
V
Sbjct: 589 KV 590
Score = 44.7 bits (104), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 22/98 (22%), Positives = 45/98 (45%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+IS C +G + + + D N ++ +C+ +E V ++ +++E
Sbjct: 504 LISGLCIAGRMNDASVVVSKLKLAGFSLDRSCYNVLISGFCKKKKLERVYELLTEMEETG 563
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQP 98
+ PD T++ LI Y K + A + M M ++G +P
Sbjct: 564 VKPDTITYNTLISYLGKTGDFATASKVMEKMIKEGLRP 601
Score = 38.5 bits (88), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 33/151 (21%), Positives = 63/151 (41%), Gaps = 10/151 (6%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I F ++G F+ +L + + +V+ LN+++ C+ G + + ++
Sbjct: 399 LIDGFFKAGNFDRAHELFRQMNEEGVQPNVITLNTLVDGLCKHGRVHRAVEFFNEMKGKG 458
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHL---GKMRAHS 117
+ + T+ LI FC A + +M G P+ + SLI L G+M S
Sbjct: 459 LKGNAATYTALISAFCGVNNINRAMQCFEEMLSSGCSPDAVVYYSLISGLCIAGRMNDAS 518
Query: 118 EALSVYNMLRYSKRSMCKALHEKILHILISG 148
+S + +S C ++LISG
Sbjct: 519 VVVSKLKLAGFSLDRSC-------YNVLISG 542
Score = 37.4 bits (85), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 25/100 (25%), Positives = 49/100 (49%), Gaps = 1/100 (1%)
Query: 29 DVVLLNSMLCAYCRTGDMESVMHVMRKLDELAIS-PDYNTFHILIKYFCKEKMYMLAYRT 87
DVVL N+++ C+ G E + ++ ++ I+ P+ T++ LI F K + A+
Sbjct: 356 DVVLFNTLIDGLCKVGKEEDGLSLLEEMKMGNINRPNTVTYNCLIDGFFKAGNFDRAHEL 415
Query: 88 MVDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVYNMLR 127
M+ +G QP ++L+ L K A+ +N ++
Sbjct: 416 FRQMNEEGVQPNVITLNTLVDGLCKHGRVHRAVEFFNEMK 455
>gi|356518398|ref|XP_003527866.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like [Glycine max]
Length = 603
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 31/122 (25%), Positives = 53/122 (43%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I A C + +L + K K DVV N ++ C+ G ++ + + +
Sbjct: 250 LIEATCNDSGVGQAMKLLDEMRKKGCKPDVVTYNVLINGICKEGRLDEAIKFLNNMPLYG 309
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
P+ T +I+++ C +M A R + DM RKG P + LI L + R A+
Sbjct: 310 CQPNVITHNIILRSMCSTGRWMDAERLLADMLRKGCSPSVVTFNILINFLCRKRLLGRAI 369
Query: 121 SV 122
V
Sbjct: 370 DV 371
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/124 (26%), Positives = 60/124 (48%), Gaps = 3/124 (2%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I +C+SG ++ Q+ E DVV N++L + C +G ++ M V+ + +
Sbjct: 183 LIGGYCKSGEIDKALQV---LERMSVAPDVVTYNTILRSLCDSGKLKEAMEVLDRQMQRE 239
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
PD T+ ILI+ C + A + + +M +KG +P+ + LI + K EA+
Sbjct: 240 CYPDVITYTILIEATCNDSGVGQAMKLLDEMRKKGCKPDVVTYNVLINGICKEGRLDEAI 299
Query: 121 SVYN 124
N
Sbjct: 300 KFLN 303
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/88 (26%), Positives = 47/88 (53%), Gaps = 8/88 (9%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I FCRSG + ++ E DV+ N ++ YC++G+++ + V L+ ++
Sbjct: 148 LIRGFCRSGKTRKATRIMEILENSGAVPDVITYNVLIGGYCKSGEIDKALQV---LERMS 204
Query: 61 ISPDYNTFHILIKYFC-----KEKMYML 83
++PD T++ +++ C KE M +L
Sbjct: 205 VAPDVVTYNTILRSLCDSGKLKEAMEVL 232
Score = 44.3 bits (103), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 47/95 (49%)
Query: 29 DVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYMLAYRTM 88
D+V N++L A C+ G ++ + ++ +L SP T++ +I K A +
Sbjct: 418 DIVTYNTLLTALCKDGKADAAVEILNQLSSKGCSPVLITYNTVIDGLTKVGKTEYAAELL 477
Query: 89 VDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVY 123
+M RKG +P+ S+L+ LG EA+ ++
Sbjct: 478 EEMRRKGLKPDIITYSTLLRGLGCEGKVDEAIKIF 512
Score = 40.4 bits (93), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 20/71 (28%), Positives = 34/71 (47%)
Query: 7 RSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYN 66
R+G EE + + D DV+ S++ +CR+G +M L+ PD
Sbjct: 119 RNGELEEGLKFLERMIYQGDIPDVIACTSLIRGFCRSGKTRKATRIMEILENSGAVPDVI 178
Query: 67 TFHILIKYFCK 77
T+++LI +CK
Sbjct: 179 TYNVLIGGYCK 189
Score = 39.7 bits (91), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 22/99 (22%), Positives = 44/99 (44%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ C+ G +E + + + +V+ N +L + C TG ++ +
Sbjct: 285 LINGICKEGRLDEAIKFLNNMPLYGCQPNVITHNIILRSMCSTGRWMDAERLLADMLRKG 344
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPE 99
SP TF+ILI + C++++ A + M + G P
Sbjct: 345 CSPSVVTFNILINFLCRKRLLGRAIDVLEKMPKHGCMPN 383
Score = 35.0 bits (79), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 28/126 (22%), Positives = 57/126 (45%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ + C +G + + ++L D K VV N ++ CR + + V+ K+ +
Sbjct: 320 ILRSMCSTGRWMDAERLLADMLRKGCSPSVVTFNILINFLCRKRLLGRAIDVLEKMPKHG 379
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
P+ +++ L+ FC+EK A + M +G P+ ++L+ L K A+
Sbjct: 380 CMPNSLSYNPLLHGFCQEKKMDRAIEYLEIMVSRGCYPDIVTYNTLLTALCKDGKADAAV 439
Query: 121 SVYNML 126
+ N L
Sbjct: 440 EILNQL 445
>gi|356557251|ref|XP_003546931.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g52620-like [Glycine max]
Length = 808
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 22/77 (28%), Positives = 42/77 (54%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ FC++G FE QL + A+ +V + N+++ A + G + MR++ E+
Sbjct: 277 LINGFCKAGEFEAVDQLLTEMAARGLNMNVKVFNNVIDAEFKYGLVTKAAETMRRMAEMG 336
Query: 61 ISPDYNTFHILIKYFCK 77
PD T++ +I + CK
Sbjct: 337 CGPDITTYNTMINFSCK 353
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/95 (25%), Positives = 43/95 (45%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ C G EE ++L D K VV N ++ YC+ GD++ +++L
Sbjct: 207 VVKGLCNLGKIEEGRRLVKDRWGKGCVPHVVFYNMIIDGYCKKGDLQCATRTLKELKMKG 266
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKG 95
+ P T+ LI FCK + + + +M +G
Sbjct: 267 VLPTVETYGALINGFCKAGEFEAVDQLLTEMAARG 301
Score = 45.1 bits (105), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 27/126 (21%), Positives = 57/126 (45%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++S C++G F K L + + + DV + +++ + R G+++ + + + +
Sbjct: 452 LMSGLCKNGRFPAMKLLLSEMLDRNVQPDVYVFATLMDGFIRNGELDEAIKIFKVIIRKG 511
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ P ++ +IK FCK A + M H P+E S++I K S AL
Sbjct: 512 VDPGIVGYNAMIKGFCKFGKMTDALSCLNKMKNVHHAPDEYTYSTVIDGYVKQHDMSSAL 571
Query: 121 SVYNML 126
++ +
Sbjct: 572 KMFGQM 577
>gi|302821481|ref|XP_002992403.1| hypothetical protein SELMODRAFT_42645 [Selaginella moellendorffii]
gi|300139819|gb|EFJ06553.1| hypothetical protein SELMODRAFT_42645 [Selaginella moellendorffii]
Length = 448
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/138 (23%), Positives = 68/138 (49%), Gaps = 3/138 (2%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ A C+S + + D +VV N+++ +C+ G+M+ + + ++ E +
Sbjct: 108 LVDALCKSARISDASLILEDMIEAGCAPNVVTYNTLINGFCKLGNMDEAVVLFNQMLENS 167
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
SPD T++ILI +CK++ + + +M + G +P ++L+ L K + +A
Sbjct: 168 CSPDVFTYNILIDGYCKQERPQDGAKLLQEMVKYGCEPNFITYNTLMDSLVKSGKYIDA- 226
Query: 121 SVYNMLRYSKRSMCKALH 138
+N+ + R CK H
Sbjct: 227 --FNLAQMMLRRDCKPSH 242
Score = 42.7 bits (99), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 30/122 (24%), Positives = 52/122 (42%), Gaps = 6/122 (4%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDK---YDVVLLNSMLCAYCRTGDMESVMHVMRKLD 57
MI FC+ G + +L F+ D+ D+ N M+ CR ++ ++ ++
Sbjct: 248 MIDMFCKVGQLDLAYEL---FQLMTDRGCLPDIYTYNIMISGACRANRIDDARQLLERMT 304
Query: 58 ELAISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHS 117
E PD T++ ++ CK AY + G+ + CS+LI L K R
Sbjct: 305 EAGCPPDVVTYNSIVSGLCKASQVDEAYEVYEVLRNGGYFLDVVTCSTLIDGLCKSRRLD 364
Query: 118 EA 119
+A
Sbjct: 365 DA 366
Score = 38.9 bits (89), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 40/99 (40%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
MIS CR+ ++ +QL DVV NS++ C+ ++ V L
Sbjct: 283 MISGACRANRIDDARQLLERMTEAGCPPDVVTYNSIVSGLCKASQVDEAYEVYEVLRNGG 342
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPE 99
D T LI CK + A + + +M R G P+
Sbjct: 343 YFLDVVTCSTLIDGLCKSRRLDDAEKLLREMERNGSAPD 381
Score = 38.1 bits (87), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 28/126 (22%), Positives = 57/126 (45%), Gaps = 1/126 (0%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ FC++ F++ +L + E + + N+++ C G ++S + R + +
Sbjct: 39 LINGFCKARDFQQAYRLLDEMEKRGIVPHNAVYNTIIKGLCDNGRVDSALVHYRDM-QRH 97
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+P T+ IL+ CK A + DM G P ++LI K+ EA+
Sbjct: 98 CAPSVITYTILVDALCKSARISDASLILEDMIEAGCAPNVVTYNTLINGFCKLGNMDEAV 157
Query: 121 SVYNML 126
++N +
Sbjct: 158 VLFNQM 163
Score = 37.7 bits (86), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 23/95 (24%), Positives = 43/95 (45%)
Query: 33 LNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYMLAYRTMVDMH 92
N M+ +C+ G ++ + + + + PD T++I+I C+ A + + M
Sbjct: 245 FNLMIDMFCKVGQLDLAYELFQLMTDRGCLPDIYTYNIMISGACRANRIDDARQLLERMT 304
Query: 93 RKGHQPEEELCSSLIFHLGKMRAHSEALSVYNMLR 127
G P+ +S++ L K EA VY +LR
Sbjct: 305 EAGCPPDVVTYNSIVSGLCKASQVDEAYEVYEVLR 339
Score = 37.0 bits (84), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 37/73 (50%), Gaps = 1/73 (1%)
Query: 62 SPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHL-GKMRAHSEAL 120
SPD T+ LI FCK + + AYR + +M ++G P + +++I L R S +
Sbjct: 30 SPDSITYSTLINGFCKARDFQQAYRLLDEMEKRGIVPHNAVYNTIIKGLCDNGRVDSALV 89
Query: 121 SVYNMLRYSKRSM 133
+M R+ S+
Sbjct: 90 HYRDMQRHCAPSV 102
>gi|15235161|ref|NP_195672.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75266408|sp|Q9SV96.1|PP358_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g39620, chloroplastic; AltName: Full=Protein EMBRYO
DEFECTIVE 2453; Flags: Precursor
gi|5042178|emb|CAB44697.1| putative protein [Arabidopsis thaliana]
gi|7270946|emb|CAB80625.1| putative protein [Arabidopsis thaliana]
gi|58013022|gb|AAW62964.1| chloroplast embryo-defective 2453 [Arabidopsis thaliana]
gi|332661694|gb|AEE87094.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 563
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 34/126 (26%), Positives = 61/126 (48%), Gaps = 6/126 (4%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTG---DMESVMHVMRKLD 57
++ AF +SG ++ L D + DV N ++ AY + G +ME+V+ MR +
Sbjct: 214 LLRAFAQSGKVDQVNALFKDLDMSPVSPDVYTFNGVMDAYGKNGMIKEMEAVLTRMRSNE 273
Query: 58 ELAISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHS 117
PD TF++LI + K++ + +T + R +P +S+I + GK R
Sbjct: 274 ---CKPDIITFNVLIDSYGKKQEFEKMEQTFKSLMRSKEKPTLPTFNSMIINYGKARMID 330
Query: 118 EALSVY 123
+A V+
Sbjct: 331 KAEWVF 336
>gi|242054767|ref|XP_002456529.1| hypothetical protein SORBIDRAFT_03g037920 [Sorghum bicolor]
gi|241928504|gb|EES01649.1| hypothetical protein SORBIDRAFT_03g037920 [Sorghum bicolor]
Length = 517
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 31/127 (24%), Positives = 58/127 (45%), Gaps = 1/127 (0%)
Query: 1 MISAFCRSGC-FEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDEL 59
+++ +C C E K+ E K DVV SM+ + + G + SVM + ++E
Sbjct: 246 VLNGWCNIVCSLREAKRFWSSMERKGIDRDVVSYGSMISCFSKAGSLHSVMKLFNHMNEA 305
Query: 60 AISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEA 119
++PD ++ ++ K + A + M K P+ +SLI L K R EA
Sbjct: 306 GVAPDRKVYNAIVFALAKGRCVKAAKMLVRTMEEKQVAPDTATFNSLIGPLCKARQVQEA 365
Query: 120 LSVYNML 126
+ +++ +
Sbjct: 366 MEMFDAM 372
Score = 37.7 bits (86), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 18/73 (24%), Positives = 31/73 (42%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ A + C + K L E K D NS++ C+ ++ M + + E
Sbjct: 317 IVFALAKGRCVKAAKMLVRTMEEKQVAPDTATFNSLIGPLCKARQVQEAMEMFDAMLERG 376
Query: 61 ISPDYNTFHILIK 73
+SP TFH L+
Sbjct: 377 LSPSVRTFHALLN 389
Score = 36.6 bits (83), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 33/138 (23%), Positives = 59/138 (42%), Gaps = 10/138 (7%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
MIS F ++G +L D + N+++ A + +++ ++R ++E
Sbjct: 282 MISCFSKAGSLHSVMKLFNHMNEAGVAPDRKVYNAIVFALAKGRCVKAAKMLVRTMEEKQ 341
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFH--LGKMRAHSE 118
++PD TF+ LI CK + A M +G P S FH L R +E
Sbjct: 342 VAPDTATFNSLIGPLCKARQVQEAMEMFDAMLERGLSP-----SVRTFHALLNVARNSTE 396
Query: 119 ALSVYNMLRYSKRSMCKA 136
V+++L K+ C+
Sbjct: 397 ---VFDLLDKMKQLQCEP 411
>gi|225461712|ref|XP_002283237.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g53330-like [Vitis vinifera]
Length = 464
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 35/146 (23%), Positives = 61/146 (41%), Gaps = 17/146 (11%)
Query: 27 KYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYMLAYR 86
K D V N+M+ +C D E+ V+ ++ PD +++++I CKE + A
Sbjct: 286 KPDTVTYNAMISGFCNEKDFEAAYGVLEEMVAKGCKPDVISYNVIISGLCKEGKWREAND 345
Query: 87 TMVDMHRKGHQPE--------EELCSSLIFHLGKMRAHSEALSVYNMLRYSKRSMCKALH 138
DM R+G P+ + LC + F+ Y SK +AL
Sbjct: 346 LFEDMPRRGCTPDVGSYRILFDGLCEGMQFNEAAFILDEMVFKGYAPKSASKTKFVEALC 405
Query: 139 E--------KILHILISGKLLK-DAY 155
+ K+L+ L+ G ++ DA+
Sbjct: 406 QEGNLELLCKVLNSLVKGNVIDGDAW 431
Score = 42.4 bits (98), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 24/99 (24%), Positives = 47/99 (47%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ CR +L + A + D + ++++ A + G + V V+ ++ E
Sbjct: 225 LMKGLCRVNELSLAFELKKEMVANKLRLDSGIYSTLIAALFKVGRKDEVFVVLEEMRENG 284
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPE 99
PD T++ +I FC EK + AY + +M KG +P+
Sbjct: 285 CKPDTVTYNAMISGFCNEKDFEAAYGVLEEMVAKGCKPD 323
>gi|242075962|ref|XP_002447917.1| hypothetical protein SORBIDRAFT_06g017980 [Sorghum bicolor]
gi|241939100|gb|EES12245.1| hypothetical protein SORBIDRAFT_06g017980 [Sorghum bicolor]
Length = 550
Score = 50.1 bits (118), Expect = 3e-04, Method: Composition-based stats.
Identities = 40/159 (25%), Positives = 70/159 (44%), Gaps = 1/159 (0%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+IS +C++G E+ + D + + V N ++ Y + DMES + + R+L
Sbjct: 295 VISGYCKAGRMEDALSVYNDMLESGTRPNTVTYNVLINGYGKALDMESAVRMYRQLILRR 354
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
PD TF LI +C+ A R +M + QP S +I L K +EAL
Sbjct: 355 CPPDVVTFSSLIDGYCRCGQLDDAMRIWKEMGQHHIQPNVYTFSIIIHSLCKQNRSAEAL 414
Query: 121 SVYNMLRYSKRSMCKA-LHEKILHILISGKLLKDAYIVV 158
L + ++ ++ IL G +++A ++V
Sbjct: 415 GFLRELNMRADIAPQTFIYNPVIDILCKGGQVEEANLIV 453
Score = 42.4 bits (98), Expect = 0.068, Method: Composition-based stats.
Identities = 28/101 (27%), Positives = 46/101 (45%), Gaps = 2/101 (1%)
Query: 33 LNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYMLAYRTMVDMH 92
N ++ CR G+ + + ++ ++ E SPD T +IL+ C+ K + + +
Sbjct: 221 FNVVIKGVCRVGNFQKALELVERMTEFGCSPDTITHNILVDGLCRAKQVNRGHDLLRRLQ 280
Query: 93 RKG-HQPEEELCSSLIFHLGKMRAHSEALSVYN-MLRYSKR 131
R G P +S+I K +ALSVYN ML R
Sbjct: 281 RDGVCMPNVVTYTSVISGYCKAGRMEDALSVYNDMLESGTR 321
>gi|449453087|ref|XP_004144290.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Cucumis sativus]
gi|449522905|ref|XP_004168466.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Cucumis sativus]
Length = 915
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 38/158 (24%), Positives = 76/158 (48%), Gaps = 2/158 (1%)
Query: 2 ISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAI 61
I C+ G EE + L + K K + V+ ++++ YC+ G + ++ K+
Sbjct: 491 IDTLCKRGLVEEARSLFESLKEKGIKANEVIYSTLIDGYCKVGKVSDGRFLLDKMLSAGC 550
Query: 62 SPDYNTFHILIKYFCKEKMYMLAYRTMVD-MHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
P+ T++ LI +CKEK + A R +VD M ++ +P + + LI +L K +A
Sbjct: 551 VPNSITYNSLIDGYCKEKNFKEA-RLLVDIMIKRDIEPAADTYTILIDNLLKDDEFDQAH 609
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLKDAYIVV 158
+++ + + ++ +H S LKDA +++
Sbjct: 610 DMFDQMLSTGSHPDVFIYTAFIHAYCSHGRLKDAEVLI 647
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 40/148 (27%), Positives = 66/148 (44%), Gaps = 4/148 (2%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I +C+ G ++ E+ + N ++ +CR ++ M ++ K+ E
Sbjct: 385 LIDGYCKKGLSASALEILSLMESNNCSPNARTYNELILGFCRGKNIHKAMSLLHKMLERK 444
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ P+ T++ILI CKE AY+ + M+ G P+E S I L K EA
Sbjct: 445 LQPNVVTYNILIHGQCKEGDLGSAYKLLSLMNESGLVPDEWTYSVFIDTLCKRGLVEEAR 504
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISG 148
S++ L K KA +E I LI G
Sbjct: 505 SLFESL---KEKGIKA-NEVIYSTLIDG 528
Score = 39.7 bits (91), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 24/99 (24%), Positives = 45/99 (45%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I + C F++ K++ K VV N+++ YC+ G S + ++ ++
Sbjct: 350 LICSLCEDSNFDDAKKILNGMLEKGLIPSVVTYNALIDGYCKKGLSASALEILSLMESNN 409
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPE 99
SP+ T++ LI FC+ K A + M + QP
Sbjct: 410 CSPNARTYNELILGFCRGKNIHKAMSLLHKMLERKLQPN 448
Score = 37.7 bits (86), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 21/78 (26%), Positives = 37/78 (47%)
Query: 2 ISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAI 61
I A+C G ++ + L AK D +L + AY R G ++ +++++ E+
Sbjct: 631 IHAYCSHGRLKDAEVLICKMNAKGIMPDTMLYTLFIDAYGRFGSIDGAFGILKRMHEVGC 690
Query: 62 SPDYNTFHILIKYFCKEK 79
P Y T+ LIK+ K
Sbjct: 691 EPSYYTYSCLIKHLSNAK 708
Score = 37.7 bits (86), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 25/98 (25%), Positives = 47/98 (47%)
Query: 29 DVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYMLAYRTM 88
++ LN+M+ YC+ G++ + K+ + +S D T+ LI +C+ K A
Sbjct: 203 NIFTLNTMVNGYCKLGNVVEAELYVSKIVQAGLSLDTFTYTSLILGYCRNKNVDAANAIF 262
Query: 89 VDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVYNML 126
+ M KG E ++LI + R EAL +++ +
Sbjct: 263 LSMPNKGCLRNEVSYTNLIHGFCEARRVDEALKLFSQM 300
Score = 37.4 bits (85), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 22/79 (27%), Positives = 38/79 (48%)
Query: 42 RTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEE 101
R D E + + K+ E +P+ NT+ I CK +A+R M KG P E+
Sbjct: 735 RRVDYEFTLDLFGKMAEHGCAPNANTYGKFITGLCKVGCLEVAHRLFDHMKEKGQSPNED 794
Query: 102 LCSSLIFHLGKMRAHSEAL 120
+ +SL+ ++ + EA+
Sbjct: 795 IYNSLLGCSCQLGLYGEAI 813
Score = 35.4 bits (80), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 23/123 (18%), Positives = 50/123 (40%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
M++ +C+ G E + D S++ YCR ++++ + +
Sbjct: 210 MVNGYCKLGNVVEAELYVSKIVQAGLSLDTFTYTSLILGYCRNKNVDAANAIFLSMPNKG 269
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ ++ LI FC+ + A + MH P + +IF L ++ +EAL
Sbjct: 270 CLRNEVSYTNLIHGFCEARRVDEALKLFSQMHEDNCWPTVRTYTVIIFALCQLGRKTEAL 329
Query: 121 SVY 123
+++
Sbjct: 330 NMF 332
>gi|302769173|ref|XP_002968006.1| hypothetical protein SELMODRAFT_88008 [Selaginella moellendorffii]
gi|300164744|gb|EFJ31353.1| hypothetical protein SELMODRAFT_88008 [Selaginella moellendorffii]
Length = 737
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 32/138 (23%), Positives = 68/138 (49%), Gaps = 3/138 (2%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ A C+S + + D +VV N+++ +C+ G+M+ + + ++ E +
Sbjct: 242 LVDALCKSARISDASLILEDMIEAGCAPNVVTYNTLINGFCKLGNMDEAVVLFNQMLENS 301
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
SPD T++ILI +CK++ + + +M + G +P ++L+ L K + +A
Sbjct: 302 CSPDVFTYNILIDGYCKQERPQDGAKLLQEMVKYGCEPNFITYNTLMDSLVKSGKYIDAF 361
Query: 121 SVYNMLRYSKRSMCKALH 138
++ M+ R CK H
Sbjct: 362 NLAQMML---RRDCKPSH 376
Score = 42.4 bits (98), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 30/122 (24%), Positives = 52/122 (42%), Gaps = 6/122 (4%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDK---YDVVLLNSMLCAYCRTGDMESVMHVMRKLD 57
MI FC+ G + +L F+ D+ D+ N M+ CR ++ ++ ++
Sbjct: 382 MIDMFCKVGQLDLAYEL---FQLMTDRGCLPDIYTYNIMISGACRANRIDDARQLLERMT 438
Query: 58 ELAISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHS 117
E PD T++ ++ CK AY + G+ + CS+LI L K R
Sbjct: 439 EAGCPPDVVTYNSIVSGLCKASQVDEAYEVYEVLRNGGYFLDVVTCSTLIDGLCKSRRLD 498
Query: 118 EA 119
+A
Sbjct: 499 DA 500
Score = 39.3 bits (90), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 25/129 (19%), Positives = 57/129 (44%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C+S ++ ++L + E DVV ++ +C+ ++ + ++ +
Sbjct: 487 LIDGLCKSRRLDDAEKLLREMERNGSAPDVVAYTILIHGFCKADQLDKSLAFFSEMLDKG 546
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
P T+ I+I CK + M +G P+ + +S+I L K ++ EA
Sbjct: 547 CVPTVITYSIVIDKLCKSARVRDGCMLLKTMLERGVTPDAIVYTSVIDGLCKSDSYDEAY 606
Query: 121 SVYNMLRYS 129
+Y +++ +
Sbjct: 607 ELYKLMKQT 615
Score = 39.3 bits (90), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 40/99 (40%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
MIS CR+ ++ +QL DVV NS++ C+ ++ V L
Sbjct: 417 MISGACRANRIDDARQLLERMTEAGCPPDVVTYNSIVSGLCKASQVDEAYEVYEVLRNGG 476
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPE 99
D T LI CK + A + + +M R G P+
Sbjct: 477 YFLDVVTCSTLIDGLCKSRRLDDAEKLLREMERNGSAPD 515
Score = 38.5 bits (88), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 28/126 (22%), Positives = 57/126 (45%), Gaps = 1/126 (0%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ FC++ F++ +L + E + + N+++ C G ++S + R + +
Sbjct: 173 LINGFCKARDFQQAYRLLDEMEKRGIVPHNAVYNTIIKGLCDNGRVDSALVHYRDM-QRN 231
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+P T+ IL+ CK A + DM G P ++LI K+ EA+
Sbjct: 232 CAPSVITYTILVDALCKSARISDASLILEDMIEAGCAPNVVTYNTLINGFCKLGNMDEAV 291
Query: 121 SVYNML 126
++N +
Sbjct: 292 VLFNQM 297
Score = 37.4 bits (85), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 23/95 (24%), Positives = 43/95 (45%)
Query: 33 LNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYMLAYRTMVDMH 92
N M+ +C+ G ++ + + + + PD T++I+I C+ A + + M
Sbjct: 379 FNLMIDMFCKVGQLDLAYELFQLMTDRGCLPDIYTYNIMISGACRANRIDDARQLLERMT 438
Query: 93 RKGHQPEEELCSSLIFHLGKMRAHSEALSVYNMLR 127
G P+ +S++ L K EA VY +LR
Sbjct: 439 EAGCPPDVVTYNSIVSGLCKASQVDEAYEVYEVLR 473
Score = 37.0 bits (84), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 20/74 (27%), Positives = 36/74 (48%)
Query: 34 NSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHR 93
N +L A+ R + + + SPD T+ LI FCK + + AYR + +M +
Sbjct: 136 NCLLSAFVRKKKAQEAYDLFKNHRCGLCSPDSITYSTLINGFCKARDFQQAYRLLDEMEK 195
Query: 94 KGHQPEEELCSSLI 107
+G P + +++I
Sbjct: 196 RGIVPHNAVYNTII 209
>gi|357499777|ref|XP_003620177.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355495192|gb|AES76395.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 612
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 31/126 (24%), Positives = 60/126 (47%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I + C+ E L + +K DVV ++++ +C G + + + K+
Sbjct: 202 IIDSMCKVKLVNEAFDLYSEMVSKGISPDVVTYSALISGFCILGKLNDAIGLFNKMISEE 261
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
I+PD TF IL+ FCKE A + M ++G +P+ SL+ ++ ++A
Sbjct: 262 INPDVYTFSILVDGFCKEGRVKEAKNVLAMMMKQGIKPDVVTYCSLMDGYCLVKQVNKAK 321
Query: 121 SVYNML 126
S++N +
Sbjct: 322 SIFNTM 327
Score = 43.5 bits (101), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 25/97 (25%), Positives = 44/97 (45%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C+SG +L + + +D + NS+L A C+ ++ + ++ K+ +
Sbjct: 377 LIDGLCKSGKISYALKLVDEMHDRGVPHDKITYNSILDALCKNHQVDKAIALLTKMKDEG 436
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQ 97
I PD T+ ILI CK A D+ KG+
Sbjct: 437 IQPDMYTYTILIDGLCKGGRLKDAQNIFEDLLVKGYN 473
Score = 43.1 bits (100), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 31/120 (25%), Positives = 53/120 (44%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ FC+ G +E K + + K DVV S++ YC + + + +
Sbjct: 272 LVDGFCKEGRVKEAKNVLAMMMKQGIKPDVVTYCSLMDGYCLVKQVNKAKSIFNTMAQGG 331
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
++ + +++I+I FCK K A +MH K P+ +SLI L K S AL
Sbjct: 332 VTANVQSYNIMINGFCKIKKVDEAMNLFKEMHCKNIIPDVVTYNSLIDGLCKSGKISYAL 391
Score = 40.4 bits (93), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 23/99 (23%), Positives = 46/99 (46%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
MI+ FC+ +E L + K DVV NS++ C++G + + ++ ++ +
Sbjct: 342 MINGFCKIKKVDEAMNLFKEMHCKNIIPDVVTYNSLIDGLCKSGKISYALKLVDEMHDRG 401
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPE 99
+ D T++ ++ CK A + M +G QP+
Sbjct: 402 VPHDKITYNSILDALCKNHQVDKAIALLTKMKDEGIQPD 440
Score = 40.4 bits (93), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 19/90 (21%), Positives = 45/90 (50%)
Query: 35 SMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRK 94
+++ C+ G + + ++R++D + P+ ++ +I CK K+ A+ +M K
Sbjct: 166 TLINGLCKVGQTSAALQLLRRVDGKLVQPNVVMYNTIIDSMCKVKLVNEAFDLYSEMVSK 225
Query: 95 GHQPEEELCSSLIFHLGKMRAHSEALSVYN 124
G P+ S+LI + ++A+ ++N
Sbjct: 226 GISPDVVTYSALISGFCILGKLNDAIGLFN 255
>gi|297816676|ref|XP_002876221.1| hypothetical protein ARALYDRAFT_906766 [Arabidopsis lyrata subsp.
lyrata]
gi|297322059|gb|EFH52480.1| hypothetical protein ARALYDRAFT_906766 [Arabidopsis lyrata subsp.
lyrata]
Length = 754
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 32/142 (22%), Positives = 62/142 (43%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C+S E+ QL + K D NS+L +CR GD++ +++ +
Sbjct: 511 LIDGLCKSRRVEDASQLMDQMIMEGQKPDKFTYNSLLTHFCRGGDIKKAADIVQAMTSNG 570
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
PD T+ LI CK +A + + + KG + +I L + R +EA+
Sbjct: 571 CEPDIVTYGTLISGLCKAGRVEVASKLLRSIQMKGIALTPHAYNPVIQGLFRKRKTTEAI 630
Query: 121 SVYNMLRYSKRSMCKALHEKIL 142
+++ + + A+ +I+
Sbjct: 631 NLFREMLEQNEAAPDAVSYRIV 652
Score = 48.5 bits (114), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 36/134 (26%), Positives = 59/134 (44%), Gaps = 3/134 (2%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+IS C+ G +E + + + V N+++ C+ +E + R L
Sbjct: 336 VISGLCKLGEVKEAVEFLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKG 395
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
I PD TF+ LI+ C + + +A +M KG +P+E + LI L EAL
Sbjct: 396 ILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEAL 455
Query: 121 SVYNMLRYSKRSMC 134
NML+ + S C
Sbjct: 456 ---NMLKQMELSGC 466
Score = 41.2 bits (95), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 30/128 (23%), Positives = 59/128 (46%), Gaps = 2/128 (1%)
Query: 1 MISAFCRSGCFEETKQLAGD-FEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDEL 59
+++ C++G + ++ + YD DV NS++ C+ G+++ + + ++
Sbjct: 301 LVNGLCKAGHVKHAIEIMDVMLQEGYDP-DVYTYNSVISGLCKLGEVKEAVEFLDQMITR 359
Query: 60 AISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEA 119
SP+ T++ LI CKE A + KG P+ +SLI L R H A
Sbjct: 360 DCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVA 419
Query: 120 LSVYNMLR 127
+ ++ +R
Sbjct: 420 MELFEEMR 427
Score = 38.9 bits (89), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 22/110 (20%), Positives = 49/110 (44%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I + C G +E + E V+ N+++ +C+ + + +++
Sbjct: 441 LIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKIREAEEIFDEMEVHG 500
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHL 110
+S + T++ LI CK + A + M M +G +P++ +SL+ H
Sbjct: 501 VSRNSVTYNTLIDGLCKSRRVEDASQLMDQMIMEGQKPDKFTYNSLLTHF 550
Score = 37.0 bits (84), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 27/128 (21%), Positives = 56/128 (43%), Gaps = 3/128 (2%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I FC++ E +++ + E + V N+++ C++ +E +M ++
Sbjct: 476 LIDGFCKANKIREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDASQLMDQMIMEG 535
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHL---GKMRAHS 117
PD T++ L+ +FC+ A + M G +P+ +LI L G++ S
Sbjct: 536 QKPDKFTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVAS 595
Query: 118 EALSVYNM 125
+ L M
Sbjct: 596 KLLRSIQM 603
Score = 37.0 bits (84), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 23/94 (24%), Positives = 48/94 (51%), Gaps = 1/94 (1%)
Query: 28 YDVVLLNSMLCAYCRTGDMESVMHVMRKL-DELAISPDYNTFHILIKYFCKEKMYMLAYR 86
+ V +N ++ +C+ G +E ++ ++++ ++ PD TF+ L+ CK A
Sbjct: 257 WSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIE 316
Query: 87 TMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
M M ++G+ P+ +S+I L K+ EA+
Sbjct: 317 IMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAV 350
Score = 36.2 bits (82), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 24/88 (27%), Positives = 40/88 (45%), Gaps = 3/88 (3%)
Query: 20 DFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEK 79
DF K D + N ML +++ V K+ I PD +TF++LIK C+
Sbjct: 147 DFGLKPDTH---FYNRMLNLLVDGNNLKLVEIAHAKMSVWGIKPDVSTFNVLIKALCRAH 203
Query: 80 MYMLAYRTMVDMHRKGHQPEEELCSSLI 107
A + DM G P+E+ ++++
Sbjct: 204 QLRPAILMLEDMPSYGLVPDEKTFTTIM 231
>gi|357116365|ref|XP_003559952.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g28010-like [Brachypodium distachyon]
Length = 627
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 29/122 (23%), Positives = 59/122 (48%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ +C++G +E ++ + + + DVV+ ++ + CR G ++ VM K+ E
Sbjct: 189 LLQGYCKAGRWECVSKVFEEMSGRGIEPDVVMYTGLIDSLCREGKVKKATQVMDKMMERG 248
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ P+ T+++LI CKE A +M KG + ++LI L + EA+
Sbjct: 249 LEPNVVTYNVLINSMCKEGSVKEAMSLRNNMLEKGVALDAVTYNTLITGLSGVLEMDEAM 308
Query: 121 SV 122
+
Sbjct: 309 GL 310
Score = 44.3 bits (103), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 28/125 (22%), Positives = 60/125 (48%), Gaps = 7/125 (5%)
Query: 3 SAFCRSGCFEE-TKQLAG---DFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDE 58
+ R+ C E T Q G D +A + DVV +++ C D++ + ++R++ E
Sbjct: 117 TTLMRALCAERRTGQAVGLLRDMQASGVRPDVVTYGTLIRGLCDAADVDKAVELLREMCE 176
Query: 59 LAISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHL---GKMRA 115
I P+ + L++ +CK + + +M +G +P+ + + LI L GK++
Sbjct: 177 SGIEPNVVVYSCLLQGYCKAGRWECVSKVFEEMSGRGIEPDVVMYTGLIDSLCREGKVKK 236
Query: 116 HSEAL 120
++ +
Sbjct: 237 ATQVM 241
Score = 43.9 bits (102), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 31/124 (25%), Positives = 55/124 (44%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C + ++ +L + + +VV+ + +L YC+ G E V V ++
Sbjct: 154 LIRGLCDAADVDKAVELLREMCESGIEPNVVVYSCLLQGYCKAGRWECVSKVFEEMSGRG 213
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
I PD + LI C+E A + M M +G +P + LI + K + EA+
Sbjct: 214 IEPDVVMYTGLIDSLCREGKVKKATQVMDKMMERGLEPNVVTYNVLINSMCKEGSVKEAM 273
Query: 121 SVYN 124
S+ N
Sbjct: 274 SLRN 277
Score = 42.7 bits (99), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 29/111 (26%), Positives = 49/111 (44%), Gaps = 1/111 (0%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+++A C G E+ + + K K DVV ++M+ CR D +S ++ + +
Sbjct: 436 LLAALCEQGMMEQARNFFDEMH-KNCKLDVVAYSTMIHGACRLRDRKSAEEFLKHMLDEG 494
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLG 111
+ PD T+ +LI F A R + M G P+ + SLI G
Sbjct: 495 LIPDSVTYSMLINMFANSGDLGAAERVLKQMTASGFVPDVAVFDSLIKGYG 545
Score = 38.9 bits (89), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 24/99 (24%), Positives = 42/99 (42%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C++G + Q+ ++V N ++ R ++ M +M ++
Sbjct: 331 VIHGLCKTGRMRQAFQVRDMMAENGCACNLVTFNLLIGGLLRVHKVKKAMELMDEMASSG 390
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPE 99
+ PD T+ ILI FCK A + M R G +PE
Sbjct: 391 LEPDSFTYSILINGFCKMWQVDRAESLLSKMRRDGIEPE 429
>gi|321258408|ref|XP_003193925.1| hypothetical protein CGB_D8240C [Cryptococcus gattii WM276]
gi|317460395|gb|ADV22138.1| conserved hypothetical protein [Cryptococcus gattii WM276]
Length = 778
Score = 49.7 bits (117), Expect = 4e-04, Method: Composition-based stats.
Identities = 25/84 (29%), Positives = 45/84 (53%)
Query: 29 DVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYMLAYRTM 88
+++ +N++L Y R ++E++ + K EL + PD T+ L++ + + LA M
Sbjct: 543 NLITINTVLRHYAREANIEAMSALFSKAGELGLEPDVVTYTTLVQGLLRARRLDLAKGAM 602
Query: 89 VDMHRKGHQPEEELCSSLIFHLGK 112
M ++G P E +CS LI L K
Sbjct: 603 DAMQKQGIVPNERMCSMLIADLAK 626
>gi|218184398|gb|EEC66825.1| hypothetical protein OsI_33257 [Oryza sativa Indica Group]
Length = 948
Score = 49.7 bits (117), Expect = 4e-04, Method: Composition-based stats.
Identities = 44/164 (26%), Positives = 79/164 (48%), Gaps = 12/164 (7%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I A R G +++ +LA + DVV N ++ A C+ G+++ + ++ ++ E
Sbjct: 492 IIHALLRDGRWQDAVRLAKEMILHGCSLDVVSYNGLIKAMCKDGNVDRSLVLLEEMAEKG 551
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
I P+ +++ILI CKE+ A M +G P+ ++LI L KM AL
Sbjct: 552 IKPNNVSYNILISELCKERRVRDALELSKQMLNQGLAPDIVTYNTLINGLCKMGWMHAAL 611
Query: 121 SVYNMLRYSKRSMCKALHEKIL--HILISG----KLLKDAYIVV 158
++ L +H I+ +ILIS +LL DA +++
Sbjct: 612 NLLEKLHNEN------VHPDIITYNILISWHCKVRLLDDAAMLL 649
Score = 37.0 bits (84), Expect = 2.6, Method: Composition-based stats.
Identities = 30/145 (20%), Positives = 62/145 (42%), Gaps = 3/145 (2%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I A C+ G + + L + K K + V N ++ C+ + + + +++
Sbjct: 527 LIKAMCKDGNVDRSLVLLEEMAEKGIKPNNVSYNILISELCKERRVRDALELSKQMLNQG 586
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
++PD T++ LI CK A + +H + P+ + LI K+R +A
Sbjct: 587 LAPDIVTYNTLINGLCKMGWMHAALNLLEKLHNENVHPDIITYNILISWHCKVRLLDDAA 646
Query: 121 SVYNMLRYSKRSMCKALHEKILHIL 145
+ N + ++C +I+ IL
Sbjct: 647 MLLNR---AMAAVCPVGDRRIMQIL 668
Score = 36.6 bits (83), Expect = 3.7, Method: Composition-based stats.
Identities = 22/98 (22%), Positives = 42/98 (42%), Gaps = 4/98 (4%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ CR +E + + G + + +VVL N+++ G + + +
Sbjct: 286 LLQGLCRVRQADEARAMLG----RVPELNVVLFNTVIGGCLAEGKLAEATELYETMGLKG 341
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQP 98
PD +T+ IL+ CK A R + +M +KG P
Sbjct: 342 CQPDAHTYSILMHGLCKLGRISSAVRLLREMEKKGFAP 379
Score = 35.4 bits (80), Expect = 8.7, Method: Composition-based stats.
Identities = 31/161 (19%), Positives = 68/161 (42%), Gaps = 4/161 (2%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ C+ G +L + E K +VV +L ++C+ G + ++ ++
Sbjct: 352 LMHGLCKLGRISSAVRLLREMEKKGFAPNVVTYTIVLHSFCKNGMWDDTRALLEEMSAKG 411
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCS--SLIFHLGKMRAHSE 118
++ + ++ +I CK+ A + +M +G P ++CS ++I+HL E
Sbjct: 412 LTLNSQGYNGMIYALCKDGRMDEAMGLIQEMRSQGCNP--DICSYNTIIYHLCNNEQMEE 469
Query: 119 ALSVYNMLRYSKRSMCKALHEKILHILISGKLLKDAYIVVK 159
A ++ L + I+H L+ +DA + K
Sbjct: 470 AEHMFENLLEEGVVANGITYNTIIHALLRDGRWQDAVRLAK 510
>gi|449515696|ref|XP_004164884.1| PREDICTED: pentatricopeptide repeat-containing protein At3g54980,
mitochondrial-like [Cucumis sativus]
Length = 657
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 35/142 (24%), Positives = 68/142 (47%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C++G E + L F ++ + N+++ + + G++ +V R++ E+
Sbjct: 360 IIKGLCKAGRSFEGRDLFNKFVSQGFVPTCMPYNTIIDGFIKEGNINLASNVYREMCEVG 419
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
I+P T+ LI FCK LA + + DM RKG + + + +LI K R A
Sbjct: 420 ITPSTVTYTSLIDGFCKGNNIDLALKLLNDMKRKGLKMDIKAYGTLIDGFCKRRDMKSAH 479
Query: 121 SVYNMLRYSKRSMCKALHEKIL 142
+ N LR + S + ++ ++
Sbjct: 480 ELLNELRGAGLSPNRFIYNSMI 501
Score = 39.7 bits (91), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 26/124 (20%), Positives = 57/124 (45%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+A + G E +L D ++ + S++ YC G++ S + ++ ++ E
Sbjct: 116 VITACVKEGNVAEALRLKDDMVNCGKSMNLAVATSLMKGYCMQGNLRSALVLVNEISESG 175
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ P+ T+ +LI CK A+ +M KG + +S++ K ++ A
Sbjct: 176 LVPNKVTYSVLIDGCCKNGNIEKAFEFYSEMKTKGIRSSVYSLNSILEGYLKCQSWQNAF 235
Query: 121 SVYN 124
+++N
Sbjct: 236 TMFN 239
Score = 36.6 bits (83), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 15/73 (20%), Positives = 37/73 (50%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ C G FE +++ D K V++ N+++ + + G+++ + ++ +
Sbjct: 570 LINGLCNKGQFENARKILEDMNGKNMIPSVLIYNTLIAGHFKEGNLQEAFRLHDEMLDRG 629
Query: 61 ISPDYNTFHILIK 73
+ PD T+ IL+
Sbjct: 630 LVPDNITYDILVN 642
Score = 36.2 bits (82), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 26/123 (21%), Positives = 52/123 (42%), Gaps = 1/123 (0%)
Query: 30 VVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYMLAYRTMV 89
V S++ +C+ +++ + ++ + + D + LI FCK + A+ +
Sbjct: 424 TVTYTSLIDGFCKGNNIDLALKLLNDMKRKGLKMDIKAYGTLIDGFCKRRDMKSAHELLN 483
Query: 90 DMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVY-NMLRYSKRSMCKALHEKILHILISG 148
++ G P + +S+I M EA+ +Y M+ K I +L SG
Sbjct: 484 ELRGAGLSPNRFIYNSMITGFKNMNNVEEAIDLYKKMVNEGIPCDLKTYTSLIDGLLKSG 543
Query: 149 KLL 151
+LL
Sbjct: 544 RLL 546
>gi|356560286|ref|XP_003548424.1| PREDICTED: pentatricopeptide repeat-containing protein At4g01030,
mitochondrial-like [Glycine max]
Length = 911
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 24/107 (22%), Positives = 52/107 (48%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+IS + G F+ ++L + + K D+V NS++ Y +G E + V+ ++ L
Sbjct: 440 LISGYTYKGLFDNAEKLLNQMKEEGIKPDLVTWNSLVSGYSMSGRSEEALAVINRIKSLG 499
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLI 107
++P+ ++ +I C+ + YM A + M + +P +L+
Sbjct: 500 LTPNVVSWTAMISGCCQNENYMDALQFFSQMQEENVKPNSTTICTLL 546
>gi|224130398|ref|XP_002320827.1| predicted protein [Populus trichocarpa]
gi|222861600|gb|EEE99142.1| predicted protein [Populus trichocarpa]
Length = 775
Score = 49.7 bits (117), Expect = 4e-04, Method: Composition-based stats.
Identities = 26/112 (23%), Positives = 53/112 (47%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+AFC FE+ +L + D ++ +++ + + G M V+ +L +L
Sbjct: 495 LINAFCNVNNFEKAMELFNEMLKSGCSPDAIVYYTLISGFSQAGRMADASFVLAELKKLG 554
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGK 112
I PD ++ LI FC+ + + + +M G +P+ ++LI + K
Sbjct: 555 IRPDTVCYNTLIGGFCRTNKFHRVFEMLKEMEEAGLKPDTITYNTLIAYASK 606
Score = 47.8 bits (112), Expect = 0.002, Method: Composition-based stats.
Identities = 24/98 (24%), Positives = 47/98 (47%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+IS F ++G + + + + + D V N+++ +CRT V ++++++E
Sbjct: 530 LISGFSQAGRMADASFVLAELKKLGIRPDTVCYNTLIGGFCRTNKFHRVFEMLKEMEEAG 589
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQP 98
+ PD T++ LI Y K A + M M + G P
Sbjct: 590 LKPDTITYNTLIAYASKNGDLKFAQKVMRKMIKAGVVP 627
Score = 46.6 bits (109), Expect = 0.003, Method: Composition-based stats.
Identities = 27/107 (25%), Positives = 51/107 (47%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I FC++G E+ K+L + + +VV +N+++ CRTG + S ++ +
Sbjct: 425 LIDGFCKAGEIEKGKELFDEMNKEGVAPNVVTVNTLVGGMCRTGRVSSAVNFFVEAQRRG 484
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLI 107
+ D T+ LI FC + A +M + G P+ + +LI
Sbjct: 485 MKGDAVTYTALINAFCNVNNFEKAMELFNEMLKSGCSPDAIVYYTLI 531
Score = 38.9 bits (89), Expect = 0.77, Method: Composition-based stats.
Identities = 28/105 (26%), Positives = 46/105 (43%), Gaps = 8/105 (7%)
Query: 34 NSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHR 93
NS+L R G+ + +M K+ E+ I P+ TF ILI + CK + A + M
Sbjct: 309 NSLLTGLAREGNFNRMNELMEKMVEMDIQPNVVTFGILINHMCKFRRVDDALEVLEKMSG 368
Query: 94 KGH--------QPEEELCSSLIFHLGKMRAHSEALSVYNMLRYSK 130
+P+ + ++LI L K+ E L + +R K
Sbjct: 369 GKESGGISVSVEPDVVIYNTLIDGLCKVGRQQEGLGLMERMRSQK 413
Score = 37.4 bits (85), Expect = 2.0, Method: Composition-based stats.
Identities = 21/107 (19%), Positives = 47/107 (43%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ CR+G + + + K D V +++ A+C + E M + ++ +
Sbjct: 460 LVGGMCRTGRVSSAVNFFVEAQRRGMKGDAVTYTALINAFCNVNNFEKAMELFNEMLKSG 519
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLI 107
SPD ++ LI F + A + ++ + G +P+ ++LI
Sbjct: 520 CSPDAIVYYTLISGFSQAGRMADASFVLAELKKLGIRPDTVCYNTLI 566
Score = 36.6 bits (83), Expect = 3.4, Method: Composition-based stats.
Identities = 19/100 (19%), Positives = 49/100 (49%), Gaps = 1/100 (1%)
Query: 29 DVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYMLAYRTM 88
D + N ++ +C+ G++E + ++++ ++P+ T + L+ C+ A
Sbjct: 418 DTITYNCLIDGFCKAGEIEKGKELFDEMNKEGVAPNVVTVNTLVGGMCRTGRVSSAVNFF 477
Query: 89 VDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVYN-MLR 127
V+ R+G + + ++LI + +A+ ++N ML+
Sbjct: 478 VEAQRRGMKGDAVTYTALINAFCNVNNFEKAMELFNEMLK 517
Score = 35.4 bits (80), Expect = 8.5, Method: Composition-based stats.
Identities = 21/96 (21%), Positives = 47/96 (48%), Gaps = 1/96 (1%)
Query: 29 DVVLLNSMLCAYCRTGDMESVMHVMRKL-DELAISPDYNTFHILIKYFCKEKMYMLAYRT 87
DVV+ N+++ C+ G + + +M ++ + +PD T++ LI FCK
Sbjct: 382 DVVIYNTLIDGLCKVGRQQEGLGLMERMRSQKGCAPDTITYNCLIDGFCKAGEIEKGKEL 441
Query: 88 MVDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVY 123
+M+++G P ++L+ + + S A++ +
Sbjct: 442 FDEMNKEGVAPNVVTVNTLVGGMCRTGRVSSAVNFF 477
>gi|449438681|ref|XP_004137116.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g39710-like [Cucumis sativus]
Length = 749
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 29/123 (23%), Positives = 57/123 (46%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I F + G ++ Q+ + ++ N+++ +C G ME +++++ E
Sbjct: 384 LIDGFSQQGFLKQAYQIMKEMVENGFTPTIITYNALINGHCILGRMEDASGLLQEMIERG 443
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
PD ++ +I FC+ + A++ V+M KG P+ SSLI L K R E
Sbjct: 444 FIPDVVSYSTIISGFCRNQELEKAFQLKVEMVAKGISPDVATYSSLIQGLCKQRRLGEVC 503
Query: 121 SVY 123
++
Sbjct: 504 DLF 506
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/140 (27%), Positives = 62/140 (44%), Gaps = 10/140 (7%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+IS FCR+ E+ QL + AK DV +S++ C+ + V + +++ L
Sbjct: 454 IISGFCRNQELEKAFQLKVEMVAKGISPDVATYSSLIQGLCKQRRLGEVCDLFQEMLSLG 513
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ PD T+ LI +C E A R +M +KG P+ + LI K EA
Sbjct: 514 LPPDEVTYTSLINAYCIEGDLDKALRLHDEMIQKGFSPDIVTYNVLINGFNKQSRTKEA- 572
Query: 121 SVYNMLRYSKRSMCKALHEK 140
KR + K L+E+
Sbjct: 573 ---------KRLLLKLLYEE 583
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/107 (23%), Positives = 48/107 (44%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ CR G +ET ++ + + D V N+++ YC G+ + + ++ +
Sbjct: 279 VINGLCREGQMKETSEILEEMSKRRYVPDRVTFNTLINGYCNVGNFHQALVLHAEMVKNG 338
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLI 107
+SP+ T+ LI CK A + M +G P ++LI
Sbjct: 339 LSPNVVTYTTLINSMCKAGNLNRAMEFLDQMRDRGLHPNGRTYTTLI 385
Score = 44.7 bits (104), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 28/123 (22%), Positives = 55/123 (44%), Gaps = 3/123 (2%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ +C G F + L + +VV +++ + C+ G++ M + ++ +
Sbjct: 314 LINGYCNVGNFHQALVLHAEMVKNGLSPNVVTYTTLINSMCKAGNLNRAMEFLDQMRDRG 373
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFH---LGKMRAHS 117
+ P+ T+ LI F ++ AY+ M +M G P ++LI LG+M S
Sbjct: 374 LHPNGRTYTTLIDGFSQQGFLKQAYQIMKEMVENGFTPTIITYNALINGHCILGRMEDAS 433
Query: 118 EAL 120
L
Sbjct: 434 GLL 436
Score = 42.0 bits (97), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 31/148 (20%), Positives = 67/148 (45%), Gaps = 12/148 (8%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I FC +G E G+ E +VV N+++ AYC+ + ++R +
Sbjct: 209 LIRGFCTAGNLEMGLFFFGEMERNGCLPNVVTYNTIIDAYCKLRKIGEAFKLLRLMALKG 268
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
++P+ +++++I C+E + +M ++ + P+ ++LI + +AL
Sbjct: 269 LNPNLISYNVVINGLCREGQMKETSEILEEMSKRRYVPDRVTFNTLINGYCNVGNFHQAL 328
Query: 121 SVY----------NMLRYSK--RSMCKA 136
++ N++ Y+ SMCKA
Sbjct: 329 VLHAEMVKNGLSPNVVTYTTLINSMCKA 356
Score = 39.7 bits (91), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 22/79 (27%), Positives = 41/79 (51%)
Query: 29 DVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYMLAYRTM 88
D V S++ AYC GD++ + + ++ + SPD T+++LI F K+ A R +
Sbjct: 517 DEVTYTSLINAYCIEGDLDKALRLHDEMIQKGFSPDIVTYNVLINGFNKQSRTKEAKRLL 576
Query: 89 VDMHRKGHQPEEELCSSLI 107
+ + + P E ++LI
Sbjct: 577 LKLLYEESVPNEITYNTLI 595
Score = 38.1 bits (87), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 37/165 (22%), Positives = 68/165 (41%), Gaps = 12/165 (7%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I A+C+ E +L K +++ N ++ CR G M+ ++ ++ +
Sbjct: 244 IIDAYCKLRKIGEAFKLLRLMALKGLNPNLISYNVVINGLCREGQMKETSEILEEMSKRR 303
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
PD TF+ LI +C + A +M + G P ++LI + K + A+
Sbjct: 304 YVPDRVTFNTLINGYCNVGNFHQALVLHAEMVKNGLSPNVVTYTTLINSMCKAGNLNRAM 363
Query: 121 SVYNMLRYSKRSMCKALHE--KILHILISG----KLLKDAYIVVK 159
+ +R + LH + LI G LK AY ++K
Sbjct: 364 EFLDQMRD------RGLHPNGRTYTTLIDGFSQQGFLKQAYQIMK 402
>gi|357498921|ref|XP_003619749.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355494764|gb|AES75967.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 680
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 33/126 (26%), Positives = 59/126 (46%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ AFC+ G +E K + K D+V NS++ YC ++ ++ +
Sbjct: 286 LVDAFCKEGRVKEAKNGLAMMMKQGIKPDIVTYNSLMDGYCLVNEVNMAKSILNTMSHRG 345
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
++ +++I+I FCK KM A + +MH K P +SLI L K S AL
Sbjct: 346 VTATVRSYNIVINGFCKIKMVDQAMKLFKEMHHKQIFPNVITYNSLIDGLCKSGRISYAL 405
Query: 121 SVYNML 126
+ +++
Sbjct: 406 ELIDLM 411
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/99 (22%), Positives = 49/99 (49%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I + C+ + L + ++ ++V ++++ +C G ++ + + K+
Sbjct: 216 IIDSMCKDKNVNDAFDLYSEMVSRRISSNIVTYSALISGFCIVGKLKDAIGLFNKMTSEN 275
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPE 99
I+PD TF+IL+ FCKE A + M ++G +P+
Sbjct: 276 INPDVYTFNILVDAFCKEGRVKEAKNGLAMMMKQGIKPD 314
Score = 37.4 bits (85), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 24/97 (24%), Positives = 44/97 (45%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C+SG +L + + D++ +S+L A C+ ++ + ++ KL +
Sbjct: 391 LIDGLCKSGRISYALELIDLMHDRGQQPDIITYSSILDALCKNHLVDKAIALLIKLKDQG 450
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQ 97
I P+ T+ ILI CK A D+ KG+
Sbjct: 451 IRPNMYTYTILIDGLCKGGRLEDARNIFEDLLVKGYN 487
>gi|297726211|ref|NP_001175469.1| Os08g0248500 [Oryza sativa Japonica Group]
gi|255678284|dbj|BAH94197.1| Os08g0248500 [Oryza sativa Japonica Group]
Length = 1487
Score = 49.7 bits (117), Expect = 4e-04, Method: Composition-based stats.
Identities = 37/152 (24%), Positives = 73/152 (48%), Gaps = 5/152 (3%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I +C +G +E +L D + K D V ++++ YC+ ME+ + + R++
Sbjct: 1213 LIDGYCLAGKMDEAMKLLSDMVSVGLKPDTVTYSTLINGYCKISRMENALSLFRQMVCNG 1272
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+SP+ T++I+++ + A V + ++G Q E C+ ++ L K EAL
Sbjct: 1273 VSPNIITYNIVLQGLFQTGQTRAAKEIYVRIIKRGIQLEISTCNIVLQGLCKNNLTGEAL 1332
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLK 152
++ L M L + +I+I G LL+
Sbjct: 1333 QMFQNLCL----MDVKLETRTFNIMI-GSLLR 1359
Score = 38.1 bits (87), Expect = 1.1, Method: Composition-based stats.
Identities = 15/56 (26%), Positives = 30/56 (53%)
Query: 22 EAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCK 77
+A + DV+ ++++ YC G M+ M ++ + + + PD T+ LI +CK
Sbjct: 1199 QAHPSEVDVITYSTLIDGYCLAGKMDEAMKLLSDMVSVGLKPDTVTYSTLINGYCK 1254
>gi|242095336|ref|XP_002438158.1| hypothetical protein SORBIDRAFT_10g008940 [Sorghum bicolor]
gi|241916381|gb|EER89525.1| hypothetical protein SORBIDRAFT_10g008940 [Sorghum bicolor]
Length = 607
Score = 49.7 bits (117), Expect = 4e-04, Method: Composition-based stats.
Identities = 32/127 (25%), Positives = 55/127 (43%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I FCR E QL + + + DV N++L C+ GD +V ++ + +
Sbjct: 388 LIGGFCRKKRLHEAHQLFEEMKGAGLQPDVYTYNTLLSCLCKAGDFSAVDELLGNMIDDG 447
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
P TF L+ +CK A + M QP + ++LI L K R A+
Sbjct: 448 CQPSVVTFGTLVHGYCKAGKTDEALKIFRSMGEARIQPNTVIYNTLIDFLCKSREVDVAI 507
Query: 121 SVYNMLR 127
+++ +R
Sbjct: 508 KLFDEMR 514
Score = 39.3 bits (90), Expect = 0.51, Method: Composition-based stats.
Identities = 20/79 (25%), Positives = 38/79 (48%), Gaps = 4/79 (5%)
Query: 29 DVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYMLAYRTM 88
DV NS+L A R G++ + + + E ++ PD T+ IL+ CK + A + +
Sbjct: 130 DVSTFNSLLSALGRAGNLRGMTELFTSMREASVKPDIVTYGILLNRLCKAGLVGDALKVL 189
Query: 89 VDMHRKGHQPEEELCSSLI 107
M P ++C+ ++
Sbjct: 190 DRM----SSPGSDVCADIV 204
Score = 38.1 bits (87), Expect = 1.3, Method: Composition-based stats.
Identities = 29/136 (21%), Positives = 53/136 (38%), Gaps = 7/136 (5%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
MIS ++G + +A + K D N ++ +CR + + ++
Sbjct: 353 MISGLTQAGRLVDACNIAASMKKAGFKLDRKAYNILIGGFCRKKRLHEAHQLFEEMKGAG 412
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ PD T++ L+ CK + + +M G QP +L+ K EAL
Sbjct: 413 LQPDVYTYNTLLSCLCKAGDFSAVDELLGNMIDDGCQPSVVTFGTLVHGYCKAGKTDEAL 472
Query: 121 SVYNMLRYSKRSMCKA 136
++ RSM +A
Sbjct: 473 KIF-------RSMGEA 481
>gi|449485877|ref|XP_004157297.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At1g07740, mitochondrial-like [Cucumis sativus]
Length = 460
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 39/158 (24%), Positives = 71/158 (44%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
MI + + G +E+ L + K + VV NS L CR G+M++ + + + + E
Sbjct: 192 MIKGWIKKGGWEQACNLFDEMLEKGVQPSVVTYNSXLGVLCRKGEMDTALCLFKNMTEKG 251
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
P+ T+ +L++ +C Y A + M DM G + L+ HLGK E
Sbjct: 252 HHPNAVTYALLMEGWCFIGKYKEAKKLMFDMEFHGCKLRPVNYGVLMTHLGKTGNIDEME 311
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLKDAYIVV 158
S+ N ++ + + +++ L + DAY V+
Sbjct: 312 SLLNEMKKRRLKPDVVTYNILVNYLCKEGKVGDAYKVL 349
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 50/99 (50%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ +C G ++E K+L D E K V ++ +TG+++ + ++ ++ +
Sbjct: 262 LMEGWCFIGKYKEAKKLMFDMEFHGCKLRPVNYGVLMTHLGKTGNIDEMESLLNEMKKRR 321
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPE 99
+ PD T++IL+ Y CKE AY+ +V M G P
Sbjct: 322 LKPDVVTYNILVNYLCKEGKVGDAYKVLVKMQVGGCDPN 360
Score = 39.7 bits (91), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 25/112 (22%), Positives = 52/112 (46%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+++ ++G +E + L + + + K DVV N ++ C+ G + V+ K+
Sbjct: 297 LMTHLGKTGNIDEMESLLNEMKKRRLKPDVVTYNILVNYLCKEGKVGDAYKVLVKMQVGG 356
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGK 112
P+ T+ ++I +C + A + + M GH P + +SL+ L K
Sbjct: 357 CDPNAATYRMMIDGYCNAGDFDGAMKILNAMLMSGHYPHLKTFASLVVGLLK 408
>gi|356519375|ref|XP_003528348.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Glycine max]
Length = 589
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 29/126 (23%), Positives = 60/126 (47%)
Query: 29 DVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYMLAYRTM 88
++V +S++ +C+T ++ + ++ ++ ++PD T+ LI FCK A
Sbjct: 351 NLVTYSSLIHGWCKTKNINKALFLLGEMVNSGLNPDVVTWSTLIGGFCKAGKPEAAKELF 410
Query: 89 VDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVYNMLRYSKRSMCKALHEKILHILISG 148
MH P + C+ ++ L K + HSEA+S++ + + ++ +L + S
Sbjct: 411 CTMHEHDQHPNLQTCAIILDGLFKCQFHSEAISLFREMEKMNLELNVVIYNIVLDGMCSF 470
Query: 149 KLLKDA 154
L DA
Sbjct: 471 GKLNDA 476
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 29/126 (23%), Positives = 57/126 (45%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ + C+ G E L +K + D+V NS++ C G + ++ +
Sbjct: 218 IMDSLCKDGMVCEALNLFSGMTSKGIQPDLVAYNSLIHGLCNFGRWKEATTLLGNMMRKG 277
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
I P+ TF++L+ FCK+ M A M M G +P+ +S+I + +A+
Sbjct: 278 IMPNVQTFNVLVDNFCKDGMISRAKTIMGFMVHVGVEPDVVTYNSVISGHCLLSQMGDAV 337
Query: 121 SVYNML 126
V+ ++
Sbjct: 338 KVFELM 343
Score = 37.4 bits (85), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 29/120 (24%), Positives = 50/120 (41%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C G ++E L G+ K +V N ++ +C+ G + +M + +
Sbjct: 253 LIHGLCNFGRWKEATTLLGNMMRKGIMPNVQTFNVLVDNFCKDGMISRAKTIMGFMVHVG 312
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ PD T++ +I C A + M KG P SSLI K + ++AL
Sbjct: 313 VEPDVVTYNSVISGHCLLSQMGDAVKVFELMIHKGFLPNLVTYSSLIHGWCKTKNINKAL 372
>gi|242093812|ref|XP_002437396.1| hypothetical protein SORBIDRAFT_10g026180 [Sorghum bicolor]
gi|241915619|gb|EER88763.1| hypothetical protein SORBIDRAFT_10g026180 [Sorghum bicolor]
Length = 786
Score = 49.7 bits (117), Expect = 4e-04, Method: Composition-based stats.
Identities = 29/129 (22%), Positives = 63/129 (48%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+A CR G +E D +A+ VV N++L + + G+ + V++++++
Sbjct: 250 VIAACCRDGLVDEAVAFFEDLKARGHTPCVVTYNALLQVFGKAGNYTEALRVLKEMEQDG 309
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
PD T++ L + + Y A + + M KG P ++++ G + EAL
Sbjct: 310 CQPDAVTYNELAGTYARAGFYEEAAKCLDTMTSKGLLPNAFTYNTVMTAYGNIGKVDEAL 369
Query: 121 SVYNMLRYS 129
++++ ++ S
Sbjct: 370 ALFDQMKKS 378
Score = 45.1 bits (105), Expect = 0.009, Method: Composition-based stats.
Identities = 27/134 (20%), Positives = 62/134 (46%), Gaps = 1/134 (0%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
M+S + ++G + + ++ + D++ NS++ Y + + ++ +L
Sbjct: 600 MLSMYAKNGMYSKVTEIFDSIKQSGLSPDLITYNSLMDMYAKCSESWEAEKILNQLKSSQ 659
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ PD +++ +I FCK+ + A R + +M G P +L+ + SEA
Sbjct: 660 VKPDVVSYNTVINGFCKQGLIKEAQRILSEMIADGMAPCVVTYHTLVGGYASLEMFSEAR 719
Query: 121 SVYN-MLRYSKRSM 133
V N M++++ + M
Sbjct: 720 EVINYMIQHNLKPM 733
Score = 37.0 bits (84), Expect = 2.4, Method: Composition-based stats.
Identities = 32/125 (25%), Positives = 56/125 (44%), Gaps = 5/125 (4%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDEL- 59
++ A R+G +E +L + + +V N +L Y R G S ++ LDE+
Sbjct: 179 VLHALSRAGRYERAVELFAELRRQGVAPTLVTYNVVLDVYGRMG--RSWPRIVALLDEMR 236
Query: 60 --AISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHS 117
+ PD T +I C++ + A D+ +GH P ++L+ GK ++
Sbjct: 237 AAGVEPDDFTASTVIAACCRDGLVDEAVAFFEDLKARGHTPCVVTYNALLQVFGKAGNYT 296
Query: 118 EALSV 122
EAL V
Sbjct: 297 EALRV 301
Score = 37.0 bits (84), Expect = 2.9, Method: Composition-based stats.
Identities = 19/112 (16%), Positives = 50/112 (44%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+ + R+G +EE + +K + N+++ AY G ++ + + ++ +
Sbjct: 320 LAGTYARAGFYEEAAKCLDTMTSKGLLPNAFTYNTVMTAYGNIGKVDEALALFDQMKKSG 379
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGK 112
P+ NT++ ++ K+ + + + +M R G P ++++ GK
Sbjct: 380 CVPNVNTYNFILGMLGKKSRFTVMLEMLGEMSRSGCTPNRVTWNTMLAVCGK 431
>gi|449495714|ref|XP_004159923.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At5g39710-like [Cucumis sativus]
Length = 749
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 29/123 (23%), Positives = 57/123 (46%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I F + G ++ Q+ + ++ N+++ +C G ME +++++ E
Sbjct: 384 LIDGFSQQGFLKQAYQIMKEMVENGFTPTIITYNALINGHCILGRMEDASGLLQEMIERG 443
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
PD ++ +I FC+ + A++ V+M KG P+ SSLI L K R E
Sbjct: 444 FIPDVVSYSTIISGFCRNQELEKAFQLKVEMVAKGISPDVATYSSLIQGLCKQRRLGEVC 503
Query: 121 SVY 123
++
Sbjct: 504 DLF 506
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/140 (27%), Positives = 62/140 (44%), Gaps = 10/140 (7%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+IS FCR+ E+ QL + AK DV +S++ C+ + V + +++ L
Sbjct: 454 IISGFCRNQELEKAFQLKVEMVAKGISPDVATYSSLIQGLCKQRRLGEVCDLFQEMLSLG 513
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ PD T+ LI +C E A R +M +KG P+ + LI K EA
Sbjct: 514 LPPDEVTYTSLINAYCIEGDLDKALRLHDEMIQKGFSPDIVTYNVLINGFNKQSRTKEA- 572
Query: 121 SVYNMLRYSKRSMCKALHEK 140
KR + K L+E+
Sbjct: 573 ---------KRLLLKLLYEE 583
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/107 (23%), Positives = 48/107 (44%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ CR G +ET ++ + + D V N+++ YC G+ + + ++ +
Sbjct: 279 VINGLCREGQMKETSEILEEMSKRRYVPDRVTFNTLINGYCNVGNFHQALVLHAEMVKNG 338
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLI 107
+SP+ T+ LI CK A + M +G P ++LI
Sbjct: 339 LSPNVVTYTTLINSMCKAGNLNRAMEFLDQMRDRGLHPNGRTYTTLI 385
Score = 44.7 bits (104), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 28/123 (22%), Positives = 55/123 (44%), Gaps = 3/123 (2%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ +C G F + L + +VV +++ + C+ G++ M + ++ +
Sbjct: 314 LINGYCNVGNFHQALVLHAEMVKNGLSPNVVTYTTLINSMCKAGNLNRAMEFLDQMRDRG 373
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFH---LGKMRAHS 117
+ P+ T+ LI F ++ AY+ M +M G P ++LI LG+M S
Sbjct: 374 LHPNGRTYTTLIDGFSQQGFLKQAYQIMKEMVENGFTPTIITYNALINGHCILGRMEDAS 433
Query: 118 EAL 120
L
Sbjct: 434 GLL 436
Score = 43.1 bits (100), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 31/148 (20%), Positives = 67/148 (45%), Gaps = 12/148 (8%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I FC +G E G+ E +VV N+++ AYC+ + ++R +
Sbjct: 209 LIRGFCTAGNLEMGLXFFGEMERNGCLPNVVTYNTIIDAYCKLRKIGEAFKLLRLMALKG 268
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
++P+ +++++I C+E + +M ++ + P+ ++LI + +AL
Sbjct: 269 LNPNLISYNVVINGLCREGQMKETSEILEEMSKRRYVPDRVTFNTLINGYCNVGNFHQAL 328
Query: 121 SVY----------NMLRYSK--RSMCKA 136
++ N++ Y+ SMCKA
Sbjct: 329 VLHAEMVKNGLSPNVVTYTTLINSMCKA 356
Score = 39.7 bits (91), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 22/79 (27%), Positives = 41/79 (51%)
Query: 29 DVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYMLAYRTM 88
D V S++ AYC GD++ + + ++ + SPD T+++LI F K+ A R +
Sbjct: 517 DEVTYTSLINAYCIEGDLDKALRLHDEMIQKGFSPDIVTYNVLINGFNKQSRTKEAKRLL 576
Query: 89 VDMHRKGHQPEEELCSSLI 107
+ + + P E ++LI
Sbjct: 577 LKLLYEESVPNEITYNTLI 595
Score = 38.1 bits (87), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 37/165 (22%), Positives = 68/165 (41%), Gaps = 12/165 (7%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I A+C+ E +L K +++ N ++ CR G M+ ++ ++ +
Sbjct: 244 IIDAYCKLRKIGEAFKLLRLMALKGLNPNLISYNVVINGLCREGQMKETSEILEEMSKRR 303
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
PD TF+ LI +C + A +M + G P ++LI + K + A+
Sbjct: 304 YVPDRVTFNTLINGYCNVGNFHQALVLHAEMVKNGLSPNVVTYTTLINSMCKAGNLNRAM 363
Query: 121 SVYNMLRYSKRSMCKALHE--KILHILISG----KLLKDAYIVVK 159
+ +R + LH + LI G LK AY ++K
Sbjct: 364 EFLDQMRD------RGLHPNGRTYTTLIDGFSQQGFLKQAYQIMK 402
>gi|440793601|gb|ELR14780.1| PPR repeat/pentatricopeptide repeat domain containing protein,
partial [Acanthamoeba castellanii str. Neff]
Length = 610
Score = 49.7 bits (117), Expect = 4e-04, Method: Composition-based stats.
Identities = 32/106 (30%), Positives = 55/106 (51%), Gaps = 10/106 (9%)
Query: 34 NSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHR 93
NSM+ A+ R G ++ V ++ + I PD T+ +I CK AY+T ++M
Sbjct: 157 NSMIMAFARAGRIDKVRDMLEVMKHKGIEPDVRTYTEIINNSCKAGRVAEAYQTFIEMQD 216
Query: 94 KGHQPEEELCSSLIF---HLG------KMRAHSEALSV-YNMLRYS 129
G QP+ ++ S+LI H+G +++ EAL + +M+ YS
Sbjct: 217 VGVQPDLKVYSALIAGFSHVGDHLKAQQLKEEMEALGLEASMITYS 262
>gi|413952239|gb|AFW84888.1| hypothetical protein ZEAMMB73_407218 [Zea mays]
Length = 668
Score = 49.7 bits (117), Expect = 4e-04, Method: Composition-based stats.
Identities = 31/127 (24%), Positives = 57/127 (44%), Gaps = 3/127 (2%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I CR G + ++ E DV N+++ YCR G +++ R + +
Sbjct: 81 LIRNLCRRGRTSDAARVLRAAEGSGSPVDVFAYNTLVAGYCRYGHLDAAR---RLIGSMP 137
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
++PD T+ LI+ C A + DM R+G QP + L+ + K +A+
Sbjct: 138 VAPDAYTYTPLIRVLCDRGRVADALSLLDDMLRRGCQPNVVTYTVLLEAMCKNSGFEQAM 197
Query: 121 SVYNMLR 127
+V + +R
Sbjct: 198 AVLDEMR 204
Score = 41.6 bits (96), Expect = 0.11, Method: Composition-based stats.
Identities = 24/107 (22%), Positives = 45/107 (42%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ A C++ FE+ + + AK ++V N ++ CR G ++ ++ +L
Sbjct: 183 LLEAMCKNSGFEQAMAVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDARDLLNRLFSYG 242
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLI 107
PD ++ L+K C K + +M K P E LI
Sbjct: 243 CQPDTVSYTTLLKGLCASKRWDDVEELFAEMMEKNCMPNEVTFDMLI 289
Score = 38.5 bits (88), Expect = 1.00, Method: Composition-based stats.
Identities = 27/124 (21%), Positives = 52/124 (41%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ CR G ++ + L + + D V ++L C + + V + ++ E
Sbjct: 218 IINGMCREGRVDDARDLLNRLFSYGCQPDTVSYTTLLKGLCASKRWDDVEELFAEMMEKN 277
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
P+ TF +LI++FC+ M A + + M LC+ +I + K +A
Sbjct: 278 CMPNEVTFDMLIRFFCRGGMVERAIQVLQQMTEHECATNTTLCNIVINSICKQGRVDDAF 337
Query: 121 SVYN 124
N
Sbjct: 338 KFLN 341
Score = 37.0 bits (84), Expect = 2.8, Method: Composition-based stats.
Identities = 21/107 (19%), Positives = 44/107 (41%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I FCR G E Q+ + L N ++ + C+ G ++ + +
Sbjct: 288 LIRFFCRGGMVERAIQVLQQMTEHECATNTTLCNIVINSICKQGRVDDAFKFLNNMGSYG 347
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLI 107
+PD ++ ++K C+ + + A + +M R P E ++ I
Sbjct: 348 CNPDTISYTTVLKGLCRAERWNDAKELLKEMVRNNCPPNEVTFNTFI 394
>gi|357442883|ref|XP_003591719.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|357501105|ref|XP_003620841.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355480767|gb|AES61970.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355495856|gb|AES77059.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 524
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 26/97 (26%), Positives = 47/97 (48%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C+S +L A+ DV+ S L A C+ ++ + +++K+ +
Sbjct: 351 LIDGLCKSERISHAWELLDQMHARGQPADVITYTSFLHALCKNHQVDKAVALVKKIKDQG 410
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQ 97
I P+ NT++ILI CKE + A D+ KG++
Sbjct: 411 IQPNINTYNILIDGLCKEGRFENAQVIFQDLLIKGYK 447
Score = 44.7 bits (104), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 71/176 (40%), Gaps = 17/176 (9%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDME------SVM---- 50
+I FC G F+E L + DV N ++ A C+ G + +VM
Sbjct: 229 LIYGFCMVGQFKEAFGLFHEMVLTNINPDVCTFNILVDALCKEGSTKETKNVLAVMMKEV 288
Query: 51 -------HVMRKLDELAISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELC 103
HV + + ++PD +++ I+IK CK KM A +M KG P++
Sbjct: 289 NQVNKAKHVFNIIGKRRVTPDVHSYTIIIKRLCKIKMVDEALSLFNEMRCKGITPDKVTY 348
Query: 104 SSLIFHLGKMRAHSEALSVYNMLRYSKRSMCKALHEKILHILISGKLLKDAYIVVK 159
SSLI L K S A + + + + + LH L + A +VK
Sbjct: 349 SSLIDGLCKSERISHAWELLDQMHARGQPADVITYTSFLHALCKNHQVDKAVALVK 404
Score = 43.1 bits (100), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 32/144 (22%), Positives = 60/144 (41%), Gaps = 17/144 (11%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I + C+ E +L K DVV ++++ +C G + + ++
Sbjct: 194 IIDSLCKEKLVTEAYELYSQMIVKKVSPDVVTFSALIYGFCMVGQFKEAFGLFHEMVLTN 253
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQ-----------------PEEELC 103
I+PD TF+IL+ CKE + M ++ +Q P+
Sbjct: 254 INPDVCTFNILVDALCKEGSTKETKNVLAVMMKEVNQVNKAKHVFNIIGKRRVTPDVHSY 313
Query: 104 SSLIFHLGKMRAHSEALSVYNMLR 127
+ +I L K++ EALS++N +R
Sbjct: 314 TIIIKRLCKIKMVDEALSLFNEMR 337
Score = 41.6 bits (96), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 27/123 (21%), Positives = 52/123 (42%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C +G E A+ + + V ++ C+ G+ + + V+RK+D
Sbjct: 124 LIKGLCLNGKVHEALHFHDHVIARGFRLNEVSYGILINGLCKMGETRAALQVLRKIDGKL 183
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
++ + + +I CKEK+ AY M K P+ S+LI+ + EA
Sbjct: 184 VNTNVVMYSTIIDSLCKEKLVTEAYELYSQMIVKKVSPDVVTFSALIYGFCMVGQFKEAF 243
Query: 121 SVY 123
++
Sbjct: 244 GLF 246
Score = 39.3 bits (90), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 23/95 (24%), Positives = 42/95 (44%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C+ G FE + + D K K V N M+ C G + M ++ K+++
Sbjct: 421 LIDGLCKEGRFENAQVIFQDLLIKGYKVTVWTYNIMINGLCLEGLFDEAMTLLEKMEDNG 480
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKG 95
+PD T+ +I+ K A + + +M +G
Sbjct: 481 CTPDVVTYETIIRALFKNDENHKAEKLLREMIARG 515
Score = 35.0 bits (79), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 32/126 (25%), Positives = 52/126 (41%)
Query: 30 VVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYMLAYRTMV 89
+V N+++ YC G+M+ V+ K+ ++ PD T LIK C A
Sbjct: 83 IVTFNTVINCYCHLGEMDFAFSVLAKILKMGYHPDTITLTTLIKGLCLNGKVHEALHFHD 142
Query: 90 DMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVYNMLRYSKRSMCKALHEKILHILISGK 149
+ +G + E LI L KM AL V + + ++ I+ L K
Sbjct: 143 HVIARGFRLNEVSYGILINGLCKMGETRAALQVLRKIDGKLVNTNVVMYSTIIDSLCKEK 202
Query: 150 LLKDAY 155
L+ +AY
Sbjct: 203 LVTEAY 208
>gi|115449873|ref|NP_001048572.1| Os02g0824000 [Oryza sativa Japonica Group]
gi|113538103|dbj|BAF10486.1| Os02g0824000 [Oryza sativa Japonica Group]
Length = 1013
Score = 49.7 bits (117), Expect = 4e-04, Method: Composition-based stats.
Identities = 31/123 (25%), Positives = 58/123 (47%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ +CR G +A A+ DVV N+++ +CR G +++ V+ + E
Sbjct: 175 LIAGYCRVGDTPAALSVADRMTAQGLPMDVVGYNTLVAGFCRAGQVDAARGVLDMMKEAG 234
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ P+ T+ I Y+C+ K A+ M R G + S+L+ L + SEA
Sbjct: 235 VDPNVATYTPFIVYYCRTKGVEEAFDLYEGMVRNGVLLDVVTLSALVAGLCRDGRFSEAY 294
Query: 121 SVY 123
+++
Sbjct: 295 ALF 297
Score = 44.7 bits (104), Expect = 0.012, Method: Composition-based stats.
Identities = 31/129 (24%), Positives = 60/129 (46%), Gaps = 4/129 (3%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+++ CR+G + LA D DV+ N+++ YCR GD + + V ++
Sbjct: 141 LLAGLCRNGQVDAAAALA-DRGGGIHALDVIGWNTLIAGYCRVGDTPAALSVADRMTAQG 199
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRK-GHQPEEELCSSLIFHLGKMRAHSEA 119
+ D ++ L+ FC+ + A R ++DM ++ G P + I + + + EA
Sbjct: 200 LPMDVVGYNTLVAGFCRAGQ-VDAARGVLDMMKEAGVDPNVATYTPFIVYYCRTKGVEEA 258
Query: 120 LSVYN-MLR 127
+Y M+R
Sbjct: 259 FDLYEGMVR 267
Score = 40.0 bits (92), Expect = 0.28, Method: Composition-based stats.
Identities = 29/123 (23%), Positives = 59/123 (47%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I A C++ +E +Q+ + E K +VV +S++ + + G ++ R + E
Sbjct: 385 LIDALCKAHNVDEAEQVLLEMEEKSISPNVVTFSSVINGFVKRGLLDKATEYKRMMKERG 444
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
I+P+ T+ LI F K + A DM +G + + + SL+ L + EA+
Sbjct: 445 INPNVVTYGTLIDGFFKFQGQDAALEVYHDMLCEGVKVNKFIVDSLVNGLRQNGKIEEAM 504
Query: 121 SVY 123
+++
Sbjct: 505 ALF 507
Score = 37.7 bits (86), Expect = 1.6, Method: Composition-based stats.
Identities = 26/122 (21%), Positives = 48/122 (39%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+++ FCR+G + + + + +V + YCRT +E + +
Sbjct: 210 LVAGFCRAGQVDAARGVLDMMKEAGVDPNVATYTPFIVYYCRTKGVEEAFDLYEGMVRNG 269
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ D T L+ C++ + AY +M + G P +LI L K E L
Sbjct: 270 VLLDVVTLSALVAGLCRDGRFSEAYALFREMDKVGAAPNHVTYCTLIDSLAKAGRGKELL 329
Query: 121 SV 122
S+
Sbjct: 330 SL 331
Score = 36.6 bits (83), Expect = 3.6, Method: Composition-based stats.
Identities = 17/71 (23%), Positives = 35/71 (49%)
Query: 2 ISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAI 61
I+ C G F+E K + K D N+M+ ++CR G+ + ++ ++ +I
Sbjct: 561 INCLCMLGKFKEAKSFLTEMRNMGLKPDQSTYNTMIVSHCRKGETAKALKLLHEMKMSSI 620
Query: 62 SPDYNTFHILI 72
P+ T++ L+
Sbjct: 621 KPNLITYNTLV 631
Score = 35.4 bits (80), Expect = 7.3, Method: Composition-based stats.
Identities = 23/89 (25%), Positives = 41/89 (46%)
Query: 36 MLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKG 95
++ A C+ +++ V+ +++E +ISP+ TF +I F K + A M +G
Sbjct: 385 LIDALCKAHNVDEAEQVLLEMEEKSISPNVVTFSSVINGFVKRGLLDKATEYKRMMKERG 444
Query: 96 HQPEEELCSSLIFHLGKMRAHSEALSVYN 124
P +LI K + AL VY+
Sbjct: 445 INPNVVTYGTLIDGFFKFQGQDAALEVYH 473
>gi|357485461|ref|XP_003613018.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355514353|gb|AES95976.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 894
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 35/159 (22%), Positives = 71/159 (44%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I +C+ G E+ + + + N ++C +CR M+ M ++ K+ E
Sbjct: 371 LIDGYCKRGMMEDAICVLDSMKLNKVCPNSRTYNELICGFCRKKSMDRAMALLNKMYENK 430
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+SP+ T++ LI CK ++ A+R M + G P++ + I L KM +A
Sbjct: 431 LSPNLVTYNTLIHGLCKARVVDSAWRLHHLMIKDGFVPDQRTFCAFIDCLCKMGKVEQAH 490
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLKDAYIVVK 159
V+ L+ + L+ ++ + DA+++ K
Sbjct: 491 QVFESLKEKHAEANEFLYTALIDGYCKAEKFSDAHLLFK 529
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 44/89 (49%), Gaps = 1/89 (1%)
Query: 42 RTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEE 101
+ D E + + K+ E P+ NT+ LIK CK + LA+R M G P E
Sbjct: 718 KIADFEIITMLFEKMVEQGCVPNVNTYSKLIKGLCKVEHLSLAFRLFNHMKESGISPSEN 777
Query: 102 LCSSLIFHLGKMRAHSEALSVYN-MLRYS 129
+ +SL+ K+ H EAL + + M+ Y+
Sbjct: 778 IHNSLLSSCCKLGMHEEALRLLDSMMEYN 806
Score = 43.5 bits (101), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 31/126 (24%), Positives = 58/126 (46%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I FC+ G +E ++ K VV N+++ YC+ G ME + V+ +
Sbjct: 336 LIDYFCKVGKMDEGMEMLSTMLEKGLVSSVVPFNALIDGYCKRGMMEDAICVLDSMKLNK 395
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ P+ T++ LI FC++K A + M+ P ++LI L K R A
Sbjct: 396 VCPNSRTYNELICGFCRKKSMDRAMALLNKMYENKLSPNLVTYNTLIHGLCKARVVDSAW 455
Query: 121 SVYNML 126
+++++
Sbjct: 456 RLHHLM 461
Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 41/192 (21%), Positives = 77/192 (40%), Gaps = 39/192 (20%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDK--YDVVLLNSMLCAYCRTGDMESVMHVMRKLDE 58
+I FC G +E +L F+ K D DV ++ A+C G + ++ E
Sbjct: 266 LIHGFCEVGKIDEALELF--FQMKEDGCFPDVPTYTVLVAAFCEVGKETEALKFFEEMVE 323
Query: 59 LAISPDYNTFHILIKYFCK-----EKMYMLA-------------YRTMVDMHRKGHQPEE 100
I P+ T+ +LI YFCK E M ML+ + ++D + K E+
Sbjct: 324 NGIEPNVYTYTVLIDYFCKVGKMDEGMEMLSTMLEKGLVSSVVPFNALIDGYCKRGMMED 383
Query: 101 ELC-----------------SSLIFHLGKMRAHSEALSVYNMLRYSKRSMCKALHEKILH 143
+C + LI + ++ A+++ N + +K S + ++H
Sbjct: 384 AICVLDSMKLNKVCPNSRTYNELICGFCRKKSMDRAMALLNKMYENKLSPNLVTYNTLIH 443
Query: 144 ILISGKLLKDAY 155
L +++ A+
Sbjct: 444 GLCKARVVDSAW 455
>gi|255561437|ref|XP_002521729.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223539120|gb|EEF40716.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 629
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 33/133 (24%), Positives = 60/133 (45%), Gaps = 6/133 (4%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ C +G E ++ E K DVV N++L +CR G ++ +++++
Sbjct: 285 VVEILCNAGRVTEAVEMLERVEYKGGLVDVVAYNTLLRGFCRLGKIKVAHRFLKEMERKG 344
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLI---FHLGKMRAHS 117
P+ T++ILI FC M+ +A DM G + +LI F G++
Sbjct: 345 CLPNVETYNILISGFCDSGMFDMALDMFNDMKTDGISWNFDTYDTLIKGLFFGGRI---E 401
Query: 118 EALSVYNMLRYSK 130
E L + ++ SK
Sbjct: 402 EGLKILELMEESK 414
Score = 42.4 bits (98), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 25/112 (22%), Positives = 45/112 (40%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ FC+ G E +L + N+++ +C G ES + ++ +
Sbjct: 495 LVHGFCQEGNLREAFELMNEMVGHGYFLVASGFNALIHGFCGQGKDESALKLLDDMVGRG 554
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGK 112
PD T+ LI C++ + A M KG P+ +SL+ L K
Sbjct: 555 CVPDRGTYSPLIDALCRKGNFQKALSIFNQMIEKGITPDSSTWNSLLIRLSK 606
Score = 38.5 bits (88), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 26/125 (20%), Positives = 55/125 (44%)
Query: 2 ISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAI 61
I FC G + K + + ++++ + ++ +C+ G++ +M ++
Sbjct: 461 ILGFCEKGAVKNAKMVFDQMINEGGTPNILVYDCLVHGFCQEGNLREAFELMNEMVGHGY 520
Query: 62 SPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEALS 121
+ F+ LI FC + A + + DM +G P+ S LI L + +ALS
Sbjct: 521 FLVASGFNALIHGFCGQGKDESALKLLDDMVGRGCVPDRGTYSPLIDALCRKGNFQKALS 580
Query: 122 VYNML 126
++N +
Sbjct: 581 IFNQM 585
>gi|410129734|dbj|BAM64814.1| bvCRP-1 [Beta vulgaris]
Length = 517
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 33/141 (23%), Positives = 66/141 (46%), Gaps = 15/141 (10%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I + +G +++ ++ G+ D + NS++ + + G+++ + V+ K+
Sbjct: 227 VIELYRDNGMWKKAMEIVGEISEMGVPMDRRIYNSIIDTFGKYGELDEALKVLVKMRREE 286
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLG--------- 111
I PD T++ LIK+ CK +M A +M +G P+ ++ LI LG
Sbjct: 287 IVPDIMTWNSLIKWHCKAGDHMKALDLFTEMQDQGLYPDPKIFIILISQLGNLGKWDLLR 346
Query: 112 ------KMRAHSEALSVYNML 126
K R H ++ +VY +L
Sbjct: 347 ENFEKMKYRGHKKSGAVYAVL 367
Score = 35.0 bits (79), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 23/99 (23%), Positives = 46/99 (46%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
M +A+ + G EET ++ EA+ + ++++LN ++ A+ G + + + E
Sbjct: 402 MANAYAQQGLCEETVKVLQVMEAEGIEPNLIMLNILINAFGIAGRHLEALSIYDHIIENG 461
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPE 99
I+PD T+ L+K + K + M G P+
Sbjct: 462 INPDIVTYTTLMKALIRAKKFTKVPELYQHMELAGCTPD 500
>gi|15231886|ref|NP_188076.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75274210|sp|Q9LUD6.1|PP230_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g14580, mitochondrial; Flags: Precursor
gi|9294380|dbj|BAB02390.1| unnamed protein product [Arabidopsis thaliana]
gi|119935972|gb|ABM06049.1| At3g14580 [Arabidopsis thaliana]
gi|332642020|gb|AEE75541.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 405
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/119 (23%), Positives = 53/119 (44%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C SG E QL +F + + +V+ + ++ +C G E ++ ++++
Sbjct: 208 LIKGLCESGNLEAALQLLDEFPQQKSRPNVMTFSPLIRGFCNKGKFEEAFKLLERMEKER 267
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEA 119
I PD TF+ILI K+ + M KG +P +++ L + + EA
Sbjct: 268 IEPDTITFNILISGLRKKGRVEEGIDLLERMKVKGCEPNPGTYQEVLYGLLDKKRNLEA 326
Score = 42.0 bits (97), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 24/121 (19%), Positives = 57/121 (47%)
Query: 29 DVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYMLAYRTM 88
D LN ++ C +G++E+ + ++ + + P+ TF LI+ FC + + A++ +
Sbjct: 201 DACCLNILIKGLCESGNLEAALQLLDEFPQQKSRPNVMTFSPLIRGFCNKGKFEEAFKLL 260
Query: 89 VDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVYNMLRYSKRSMCKALHEKILHILISG 148
M ++ +P+ + LI L K E + + ++ ++++L+ L+
Sbjct: 261 ERMEKERIEPDTITFNILISGLRKKGRVEEGIDLLERMKVKGCEPNPGTYQEVLYGLLDK 320
Query: 149 K 149
K
Sbjct: 321 K 321
>gi|413934354|gb|AFW68905.1| hypothetical protein ZEAMMB73_510949 [Zea mays]
Length = 845
Score = 49.7 bits (117), Expect = 4e-04, Method: Composition-based stats.
Identities = 27/125 (21%), Positives = 59/125 (47%)
Query: 2 ISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAI 61
I+ CR C E Q + ++ + + NS++ A C+ G+M + +++ + + +
Sbjct: 536 INGLCRLDCVNEAYQAFAEMTSRGIVPNNITYNSIISALCKAGNMTEALKLVQNMRQSGL 595
Query: 62 SPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEALS 121
PD T +ILI C+E + ++DM G P+ +++I + + + A++
Sbjct: 596 VPDIYTSNILIDGLCREGKLKMVDNLLLDMCSNGLTPDTVTYNTIINAYCRAQDMNSAMN 655
Query: 122 VYNML 126
N +
Sbjct: 656 FMNKM 660
Score = 47.8 bits (112), Expect = 0.001, Method: Composition-based stats.
Identities = 25/80 (31%), Positives = 37/80 (46%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I CR G + L D + D V N+++ AYCR DM S M+ M K+
Sbjct: 605 LIDGLCREGKLKMVDNLLLDMCSNGLTPDTVTYNTIINAYCRAQDMNSAMNFMNKMLVAG 664
Query: 61 ISPDYNTFHILIKYFCKEKM 80
PD T++I + C+ M
Sbjct: 665 CEPDIFTYNIWMHSLCRNHM 684
Score = 39.7 bits (91), Expect = 0.44, Method: Composition-based stats.
Identities = 23/99 (23%), Positives = 47/99 (47%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+ISA C++G E +L + D+ N ++ CR G ++ V +++ +
Sbjct: 570 IISALCKAGNMTEALKLVQNMRQSGLVPDIYTSNILIDGLCREGKLKMVDNLLLDMCSNG 629
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPE 99
++PD T++ +I +C+ + A M M G +P+
Sbjct: 630 LTPDTVTYNTIINAYCRAQDMNSAMNFMNKMLVAGCEPD 668
Score = 38.1 bits (87), Expect = 1.3, Method: Composition-based stats.
Identities = 23/92 (25%), Positives = 42/92 (45%)
Query: 7 RSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYN 66
RSG + + A+ + + N+ML +C G + ++ + + I+PD
Sbjct: 195 RSGEVRAAWNVFEEMTAEGPRPSLATFNAMLLGFCHRGMVRVASGLLGIMGKSGIAPDVC 254
Query: 67 TFHILIKYFCKEKMYMLAYRTMVDMHRKGHQP 98
+++ILIK C A++ MHR G +P
Sbjct: 255 SYNILIKGHCVFGWSRDAFKMFEGMHRSGCEP 286
>gi|297803282|ref|XP_002869525.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297315361|gb|EFH45784.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 707
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 38/159 (23%), Positives = 73/159 (45%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I AFC++G +E L + + K + D+++ S++ +C G+++ + ++ E
Sbjct: 218 LIDAFCKAGKMDEAMGLLKEMKHKGLEADLIVYTSLIRGFCDCGELDRGKALFDEVLERG 277
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
SP T++ LI+ FCK A M +G +P + LI L + EAL
Sbjct: 278 DSPCAITYNTLIRGFCKLGRLKEASEIFEFMMERGVRPNVYTYTGLIDGLCGVGKTKEAL 337
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLKDAYIVVK 159
+ N++ + I++ L L+ DA +V+
Sbjct: 338 QLLNLMLQKDEEPNVVTYNIIINKLCKDSLVADALEIVE 376
Score = 43.9 bits (102), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 25/107 (23%), Positives = 49/107 (45%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++S+ C+ G ++ +L + + DV+ N M+ + GD++S ++ +
Sbjct: 535 LLSSLCKKGTLDQAWRLFEEMQRDDSFPDVISFNIMIDGSLKAGDIKSAESLLVGMSHAG 594
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLI 107
+SPD T+ LI F K A M G +P+ +C S++
Sbjct: 595 LSPDLFTYSKLINRFLKLGYLDEAISFFDKMIDSGFEPDAHICDSVL 641
Score = 40.0 bits (92), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 18/76 (23%), Positives = 37/76 (48%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I FC E+ QLA + + + +V ++ A+C+ G M+ M +++++
Sbjct: 183 VIRGFCEGKELEKALQLANEMQGSGCSWSLVTWGILIDAFCKAGKMDEAMGLLKEMKHKG 242
Query: 61 ISPDYNTFHILIKYFC 76
+ D + LI+ FC
Sbjct: 243 LEADLIVYTSLIRGFC 258
Score = 38.9 bits (89), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 18/70 (25%), Positives = 34/70 (48%)
Query: 29 DVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYMLAYRTM 88
D+V N +L + ++GD+ M + +++ I P+ +T+ +I FCK M +A +
Sbjct: 458 DIVTTNILLNSTLKSGDVNKAMELWKQISNSKIVPNSDTYTTMIDGFCKTGMLNVAKGLL 517
Query: 89 VDMHRKGHQP 98
M P
Sbjct: 518 CKMRLSELPP 527
Score = 38.5 bits (88), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 30/124 (24%), Positives = 49/124 (39%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
MI FC++G K L V N +L + C+ G ++ + ++
Sbjct: 500 MIDGFCKTGMLNVAKGLLCKMRLSELPPSVFDYNCLLSSLCKKGTLDQAWRLFEEMQRDD 559
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
PD +F+I+I K A +V M G P+ S LI K+ EA+
Sbjct: 560 SFPDVISFNIMIDGSLKAGDIKSAESLLVGMSHAGLSPDLFTYSKLINRFLKLGYLDEAI 619
Query: 121 SVYN 124
S ++
Sbjct: 620 SFFD 623
>gi|255566203|ref|XP_002524089.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223536657|gb|EEF38299.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 1072
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 35/126 (27%), Positives = 53/126 (42%)
Query: 2 ISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAI 61
I A CRSG EE L + + D +++ R G E + + + E I
Sbjct: 867 IRALCRSGRLEEALSLLDEVGTERSTLDQYTYGTLVHGLLRKGRQEEALAKIESMKEAGI 926
Query: 62 SPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEALS 121
+P + + LI +F KEK A + M + G +P S+LI M +A S
Sbjct: 927 NPTVHVYTSLIVHFFKEKQIEKAMQIFEKMQQDGCEPTVVTYSALIRGYMNMERADDAWS 986
Query: 122 VYNMLR 127
V N L+
Sbjct: 987 VLNHLK 992
>gi|296086456|emb|CBI32045.3| unnamed protein product [Vitis vinifera]
Length = 648
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 30/121 (24%), Positives = 57/121 (47%), Gaps = 3/121 (2%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+++ C++G ++ +L D E D V +++ AYC++ +M ++R++ +
Sbjct: 404 LVNGLCKAGNIDQAVKLMKDMEVAGFHPDAVTYTTLMDAYCKSREMVRAHELLRQMLDRE 463
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHL---GKMRAHS 117
+ P TF++L+ FC M + + M KG P +SLI MRA +
Sbjct: 464 LQPTVVTFNVLMNGFCMSGMLEDGEKLLKWMLEKGIMPNATTYNSLIKQYCIRNNMRATT 523
Query: 118 E 118
E
Sbjct: 524 E 524
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 34/127 (26%), Positives = 58/127 (45%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+++ FC SG E+ ++L K + NS++ YC +M + + R +
Sbjct: 474 LMNGFCMSGMLEDGEKLLKWMLEKGIMPNATTYNSLIKQYCIRNNMRATTEIYRGMCAKG 533
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ PD NT++ILIK CK + A+ DM KG ++LI K + EA
Sbjct: 534 VVPDGNTYNILIKGHCKARNMKEAWFLHRDMVGKGFNLTVSSYNALIKGFYKRKKFLEAR 593
Query: 121 SVYNMLR 127
++ +R
Sbjct: 594 ELFEQMR 600
Score = 44.3 bits (103), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 29/126 (23%), Positives = 63/126 (50%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C++G E +++ + ++ D V+ +++ +C+ G++ S + ++ +
Sbjct: 229 VILLLCKTGKVAEAERVLREMISEGIAPDGVIYTTLIDGFCKLGNVSSAYRLFDEMQKRK 288
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
ISPD+ T+ +I C+ M A + +M K +P+E ++LI K EA
Sbjct: 289 ISPDFITYTAVICGLCQTGRVMEADKLFHEMVCKRLEPDEVTYTALIDGYCKEGKMKEAF 348
Query: 121 SVYNML 126
S++N +
Sbjct: 349 SLHNQM 354
Score = 38.5 bits (88), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 19/98 (19%), Positives = 46/98 (46%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+ C+ G + +L + K + ++ NS++ C+ G+++ + +M+ ++
Sbjct: 369 LADGLCKCGEVDTANELLHEMCRKGLELNIYTYNSLVNGLCKAGNIDQAVKLMKDMEVAG 428
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQP 98
PD T+ L+ +CK + + A+ + M + QP
Sbjct: 429 FHPDAVTYTTLMDAYCKSREMVRAHELLRQMLDRELQP 466
Score = 38.5 bits (88), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 32/66 (48%)
Query: 34 NSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHR 93
N ++ C+TG + V+R++ I+PD + LI FCK AYR +M +
Sbjct: 227 NGVILLLCKTGKVAEAERVLREMISEGIAPDGVIYTTLIDGFCKLGNVSSAYRLFDEMQK 286
Query: 94 KGHQPE 99
+ P+
Sbjct: 287 RKISPD 292
Score = 37.0 bits (84), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 25/102 (24%), Positives = 43/102 (42%), Gaps = 6/102 (5%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I FC+ G +L + + + D + +++C C+TG VM + E+
Sbjct: 264 LIDGFCKLGNVSSAYRLFDEMQKRKISPDFITYTAVICGLCQTG---RVMEADKLFHEMV 320
Query: 61 ---ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPE 99
+ PD T+ LI +CKE A+ M + G P
Sbjct: 321 CKRLEPDEVTYTALIDGYCKEGKMKEAFSLHNQMLQMGLTPN 362
Score = 35.4 bits (80), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 22/95 (23%), Positives = 44/95 (46%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C++G E +L + K + D V +++ YC+ G M+ + ++ ++
Sbjct: 299 VICGLCQTGRVMEADKLFHEMVCKRLEPDEVTYTALIDGYCKEGKMKEAFSLHNQMLQMG 358
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKG 95
++P+ T+ L CK A + +M RKG
Sbjct: 359 LTPNIVTYTALADGLCKCGEVDTANELLHEMCRKG 393
>gi|115474441|ref|NP_001060817.1| Os08g0110200 [Oryza sativa Japonica Group]
gi|42408384|dbj|BAD09535.1| putative PPR protein [Oryza sativa Japonica Group]
gi|113622786|dbj|BAF22731.1| Os08g0110200 [Oryza sativa Japonica Group]
gi|125601950|gb|EAZ41275.1| hypothetical protein OsJ_25782 [Oryza sativa Japonica Group]
Length = 798
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 39/74 (52%)
Query: 34 NSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHR 93
N +L YC +G + + + RK+ + PD T++ L+ Y CK M A + M +
Sbjct: 245 NCLLHGYCSSGKPKEAIGIFRKMCRDGVEPDVVTYNTLMVYLCKNGRSMEARKVFDSMVK 304
Query: 94 KGHQPEEELCSSLI 107
KGH+P+ + +L+
Sbjct: 305 KGHKPDSSIYGTLL 318
Score = 38.1 bits (87), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 26/126 (20%), Positives = 55/126 (43%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I A+ + G +E + ++V +++ A CR G ++ M +L
Sbjct: 352 LIGAYAKHGMVDEAMLAFSKMRQQGLHPNIVTYGTVMDALCRVGKVDDAMSQFDRLISEG 411
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
++P+ F LI C + A V+M +G P ++L+ HL K + A
Sbjct: 412 LTPNGVVFRTLIHGLCACDKWDKAEELAVEMIGRGICPNTIFFNTLLNHLCKEGMVTRAK 471
Query: 121 SVYNML 126
++++++
Sbjct: 472 NIFDLM 477
Score = 35.0 bits (79), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 25/124 (20%), Positives = 54/124 (43%), Gaps = 2/124 (1%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYD-KYDVVLLNSMLCAYCRTGDMESVMHVMRKLDEL 59
+++ C+ G K + D + D + DV+ +++ YC G ++ ++ +
Sbjct: 457 LLNHLCKEGMVTRAKNIF-DLMVRVDVQCDVITYTTLIDGYCLDGKVDEATKLLEGMVLD 515
Query: 60 AISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEA 119
+ P+ T++ +I +CK A M KG P + S+++ L + R + A
Sbjct: 516 GVKPNEVTYNTIINGYCKNGRIEDACSLFRQMASKGVNPGIVIYSTILHGLFQTRRIAAA 575
Query: 120 LSVY 123
+Y
Sbjct: 576 KELY 579
>gi|356560499|ref|XP_003548529.1| PREDICTED: pentatricopeptide repeat-containing protein At4g19440,
chloroplastic-like [Glycine max]
Length = 836
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 30/126 (23%), Positives = 59/126 (46%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+IS + FEE ++ + + + V+ N+++ YCR GDM + V ++
Sbjct: 331 LISGLMKLEMFEEANEVLVEMYSMGFAPNEVVFNALIDGYCRKGDMGEALRVRDEMAMKG 390
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ P++ TF+ L++ FC+ A + +V + G ++CS +I L + AL
Sbjct: 391 MKPNFVTFNTLLQGFCRSNQMEQAEQVLVYILSSGLSVNMDVCSYVIHRLMERSGFVSAL 450
Query: 121 SVYNML 126
+ L
Sbjct: 451 KIVTKL 456
Score = 43.1 bits (100), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 26/123 (21%), Positives = 55/123 (44%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I +CR G E ++ + K K + V N++L +CR+ ME V+ +
Sbjct: 366 LIDGYCRKGDMGEALRVRDEMAMKGMKPNFVTFNTLLQGFCRSNQMEQAEQVLVYILSSG 425
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+S + + +I + ++ A + + + + + L + L+ L K HSEA+
Sbjct: 426 LSVNMDVCSYVIHRLMERSGFVSALKIVTKLLSGNIRVSDSLLTPLVVGLCKCEGHSEAI 485
Query: 121 SVY 123
++
Sbjct: 486 ELW 488
Score = 42.7 bits (99), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 30/121 (24%), Positives = 55/121 (45%)
Query: 2 ISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAI 61
I+AFC+ G + L E +VV N+++ ++G E + ++ +
Sbjct: 262 INAFCKGGRVGDAVDLFCKMEGLGVFPNVVTYNNVIDGLFKSGRFEEALRFKDRMVRSKV 321
Query: 62 SPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEALS 121
+P T+ +LI K +M+ A +V+M+ G P E + ++LI + EAL
Sbjct: 322 NPSVVTYGVLISGLMKLEMFEEANEVLVEMYSMGFAPNEVVFNALIDGYCRKGDMGEALR 381
Query: 122 V 122
V
Sbjct: 382 V 382
Score = 38.1 bits (87), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 26/119 (21%), Positives = 56/119 (47%), Gaps = 7/119 (5%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C+ G + + + + + + + M+ YC+ G+M+ ++ ++
Sbjct: 717 LIGGHCKLGQMDIVGSILLEMSSNGIRPNKITYTIMIDGYCKLGNMKEARELLNEMIRNG 776
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRK--GHQPEEELCSSLIFHLGKMRAHS 117
I+PD T++ L K +CKE+ + T+ H+ G EEE+ + + H K+ H+
Sbjct: 777 IAPDTVTYNALQKGYCKERELTV---TLQSDHKSNIGLPLEEEITYNTLIH--KLHPHT 830
Score = 37.0 bits (84), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 22/99 (22%), Positives = 46/99 (46%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C G +E K++ + + +V +++ +C+ G M+ V ++ ++
Sbjct: 682 LIHGMCCIGRVDEAKEIFEEMRNEGLLPNVFCYTALIGGHCKLGQMDIVGSILLEMSSNG 741
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPE 99
I P+ T+ I+I +CK A + +M R G P+
Sbjct: 742 IRPNKITYTIMIDGYCKLGNMKEARELLNEMIRNGIAPD 780
>gi|297736801|emb|CBI26002.3| unnamed protein product [Vitis vinifera]
Length = 469
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 45/82 (54%), Gaps = 1/82 (1%)
Query: 1 MISAFCRSGCFEE-TKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDEL 59
++S + ++G F+E K L+G E+ K DV +N++L + G +E + K
Sbjct: 256 VLSGYGKAGKFDEMEKVLSGMLESTSSKPDVWTMNTILSLFGNKGQIEIMEKWYEKFRNF 315
Query: 60 AISPDYNTFHILIKYFCKEKMY 81
I P+ TF+ILI + K++MY
Sbjct: 316 GIEPETRTFNILIGAYGKKRMY 337
>gi|356561716|ref|XP_003549125.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62930,
chloroplastic-like [Glycine max]
Length = 556
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 30/127 (23%), Positives = 61/127 (48%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C G ++ + D A + D + +++ C+ G+ ++ + +MR L+E +
Sbjct: 145 LIKGLCLRGEVKKALKFHDDVVALEFQLDRISYGTLINGLCKIGETKAAIQLMRNLEERS 204
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
I PD ++I+I CK K+ A +M+ K P ++LI+ M EA+
Sbjct: 205 IKPDVVMYNIIIDSLCKNKLVGEACNLYSEMNAKQIYPNVVTYTTLIYGFCIMGCLIEAV 264
Query: 121 SVYNMLR 127
++ N ++
Sbjct: 265 ALLNEMK 271
Score = 40.4 bits (93), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 33/125 (26%), Positives = 58/125 (46%), Gaps = 3/125 (2%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ C+ G + QL + E + K DVV+ N ++ + C+ + ++ +++
Sbjct: 180 LINGLCKIGETKAAIQLMRNLEERSIKPDVVMYNIIIDSLCKNKLVGEACNLYSEMNAKQ 239
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHL---GKMRAHS 117
I P+ T+ LI FC + A + +M K P+ S LI L GKM+A
Sbjct: 240 IYPNVVTYTTLIYGFCIMGCLIEAVALLNEMKLKNINPDVYTFSILIDALGKEGKMKAAK 299
Query: 118 EALSV 122
L+V
Sbjct: 300 IVLAV 304
Score = 40.4 bits (93), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 29/112 (25%), Positives = 48/112 (42%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I A + G + K + Y K DVV NS++ Y +++ +V + +
Sbjct: 285 LIDALGKEGKMKAAKIVLAVMMKAYVKPDVVTYNSLVDGYFLVNEVKHAKYVFNSMAQSG 344
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGK 112
++P ++ I+I CK KM A +M K P +SLI L K
Sbjct: 345 VTPGVQSYTIMIDGLCKTKMVDEAISLFEEMKHKNVIPNTITFNSLIDGLCK 396
Score = 39.7 bits (91), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 28/122 (22%), Positives = 51/122 (41%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C+SG L + DV+ +S++ A C+ ++ + + +K+
Sbjct: 390 LIDGLCKSGRIAYVWDLVDKMRDRSQLADVITYSSLIDALCKNCHLDQAIALFKKMITQE 449
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
I PD T+ ILI CK +A + KG+ + + +I K EAL
Sbjct: 450 IQPDMYTYTILIDGLCKGGRLKIAQEVFQHLLIKGYHLDIRTYTVMISGFCKAGLFDEAL 509
Query: 121 SV 122
++
Sbjct: 510 AL 511
>gi|302780401|ref|XP_002971975.1| hypothetical protein SELMODRAFT_96626 [Selaginella moellendorffii]
gi|300160274|gb|EFJ26892.1| hypothetical protein SELMODRAFT_96626 [Selaginella moellendorffii]
Length = 755
Score = 49.7 bits (117), Expect = 4e-04, Method: Composition-based stats.
Identities = 27/107 (25%), Positives = 51/107 (47%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ +C +G ++ ++L + A DV S++ +C+ G M V++++ +
Sbjct: 517 LVEGYCNAGLVDDAERLLEEMVASDCSPDVYTYTSLVDGFCKVGRMVEARRVLKRMAKRG 576
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLI 107
P+ T+ LI FC+ +AYR + +M G QP SLI
Sbjct: 577 CQPNVVTYTALIDAFCRAGKPTVAYRLLEEMVGNGVQPNVITYRSLI 623
Score = 46.6 bits (109), Expect = 0.004, Method: Composition-based stats.
Identities = 32/131 (24%), Positives = 62/131 (47%), Gaps = 2/131 (1%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C++G E +L GD +AK+ DV+ + ++ +C+ ++ + + + A
Sbjct: 447 LIDGLCKTGRAPEANRLFGDMKAKFCNPDVITYSCLIGGFCKLERIDMARTLFDDMLKQA 506
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ PD TF L++ +C + A R + +M P+ +SL+ K+ EA
Sbjct: 507 VLPDVVTFSTLVEGYCNAGLVDDAERLLEEMVASDCSPDVYTYTSLVDGFCKVGRMVEAR 566
Query: 121 SVYNMLRYSKR 131
V + R +KR
Sbjct: 567 RV--LKRMAKR 575
Score = 43.5 bits (101), Expect = 0.026, Method: Composition-based stats.
Identities = 27/107 (25%), Positives = 50/107 (46%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I FC+ + + L D + DVV ++++ YC G ++ ++ ++
Sbjct: 482 LIGGFCKLERIDMARTLFDDMLKQAVLPDVVTFSTLVEGYCNAGLVDDAERLLEEMVASD 541
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLI 107
SPD T+ L+ FCK + A R + M ++G QP ++LI
Sbjct: 542 CSPDVYTYTSLVDGFCKVGRMVEARRVLKRMAKRGCQPNVVTYTALI 588
Score = 42.0 bits (97), Expect = 0.085, Method: Composition-based stats.
Identities = 29/124 (23%), Positives = 56/124 (45%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C++G + +++ + + +VV NS++ +C T ++S + +M ++
Sbjct: 377 LIDGLCKTGQVRDAQEVFKRMIVRGIEPNVVTYNSLIHGFCMTNGVDSALLLMEEMTATG 436
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
PD T++ LI CK A R DM K P+ S LI K+ A
Sbjct: 437 CLPDIITYNTLIDGLCKTGRAPEANRLFGDMKAKFCNPDVITYSCLIGGFCKLERIDMAR 496
Query: 121 SVYN 124
++++
Sbjct: 497 TLFD 500
Score = 41.2 bits (95), Expect = 0.13, Method: Composition-based stats.
Identities = 26/123 (21%), Positives = 57/123 (46%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ FC+ L + + +VV ++++ +CR +++ + R++ E
Sbjct: 167 LINGFCKVHKVHRAYLLLKEMKESGLAPNVVTYSTVIHGFCRQTKVDTAYKLFRQMVENG 226
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
P+ T++ L+ C+ + AY + +M +G QP++ +L+ L K AL
Sbjct: 227 CMPNLVTYNTLLSGLCRNGLMDEAYELLDEMRERGLQPDKFSYDTLMAGLCKTGKIDMAL 286
Query: 121 SVY 123
V+
Sbjct: 287 KVF 289
Score = 40.0 bits (92), Expect = 0.31, Method: Composition-based stats.
Identities = 29/127 (22%), Positives = 52/127 (40%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I FCR + +L ++V N++L CR G M+ ++ ++ E
Sbjct: 202 VIHGFCRQTKVDTAYKLFRQMVENGCMPNLVTYNTLLSGLCRNGLMDEAYELLDEMRERG 261
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ PD ++ L+ CK +A + D P+ S+LI L K EA
Sbjct: 262 LQPDKFSYDTLMAGLCKTGKIDMALKVFEDNSNGDCPPDVVAYSTLIAGLCKAGRLDEAC 321
Query: 121 SVYNMLR 127
++ +R
Sbjct: 322 KLFEKMR 328
Score = 39.3 bits (90), Expect = 0.61, Method: Composition-based stats.
Identities = 28/127 (22%), Positives = 56/127 (44%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ C+ +E +Q+ E + +V+ +S++ C+TG + V +++
Sbjct: 342 LMDGLCKGDRLQEAQQVLETMEDRNCTPNVITYSSLIDGLCKTGQVRDAQEVFKRMIVRG 401
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
I P+ T++ LI FC A M +M G P+ ++LI L K EA
Sbjct: 402 IEPNVVTYNSLIHGFCMTNGVDSALLLMEEMTATGCLPDIITYNTLIDGLCKTGRAPEAN 461
Query: 121 SVYNMLR 127
++ ++
Sbjct: 462 RLFGDMK 468
Score = 38.5 bits (88), Expect = 0.83, Method: Composition-based stats.
Identities = 28/126 (22%), Positives = 53/126 (42%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+++ C++G + ++ D DVV ++++ C+ G ++ + K+ E +
Sbjct: 272 LMAGLCKTGKIDMALKVFEDNSNGDCPPDVVAYSTLIAGLCKAGRLDEACKLFEKMRENS 331
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
PD TF L+ CK A + + M + P SSLI L K +A
Sbjct: 332 CEPDVVTFTALMDGLCKGDRLQEAQQVLETMEDRNCTPNVITYSSLIDGLCKTGQVRDAQ 391
Query: 121 SVYNML 126
V+ +
Sbjct: 392 EVFKRM 397
Score = 36.6 bits (83), Expect = 3.2, Method: Composition-based stats.
Identities = 23/107 (21%), Positives = 46/107 (42%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ C++G +E +L + DVV +++ C+ ++ V+ +++
Sbjct: 307 LIAGLCKAGRLDEACKLFEKMRENSCEPDVVTFTALMDGLCKGDRLQEAQQVLETMEDRN 366
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLI 107
+P+ T+ LI CK A M +G +P +SLI
Sbjct: 367 CTPNVITYSSLIDGLCKTGQVRDAQEVFKRMIVRGIEPNVVTYNSLI 413
Score = 35.8 bits (81), Expect = 5.5, Method: Composition-based stats.
Identities = 32/168 (19%), Positives = 65/168 (38%), Gaps = 36/168 (21%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ FC+ G E +++ + + +VV +++ A+CR G ++ ++
Sbjct: 552 LVDGFCKVGRMVEARRVLKRMAKRGCQPNVVTYTALIDAFCRAGKPTVAYRLLEEMVGNG 611
Query: 61 ISPDYNTFHILIKYFCKE-------------------KMYMLAYRTMVD----------- 90
+ P+ T+ LI FC K M AYR M+D
Sbjct: 612 VQPNVITYRSLIGGFCGTGDLEEARKILERLERDENCKADMFAYRVMMDGLCRTGRMSAA 671
Query: 91 ------MHRKGHQPEEELCSSLIFHLGKMRAHSEALSVYNMLRYSKRS 132
+ + G P ++ +LI L + + +A+ V + S++S
Sbjct: 672 LELLEAIKQSGTPPRHDIYVALIRGLCQGKELGKAMEVLEEMTLSRKS 719
Score = 35.4 bits (80), Expect = 7.8, Method: Composition-based stats.
Identities = 23/127 (18%), Positives = 52/127 (40%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
MI C++ E + K + N ++ +C+ + +++++ E
Sbjct: 132 MIDGLCKANRLPEATTYFAKMKKKGTVPNEWTYNVLINGFCKVHKVHRAYLLLKEMKESG 191
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
++P+ T+ +I FC++ AY+ M G P ++L+ L + EA
Sbjct: 192 LAPNVVTYSTVIHGFCRQTKVDTAYKLFRQMVENGCMPNLVTYNTLLSGLCRNGLMDEAY 251
Query: 121 SVYNMLR 127
+ + +R
Sbjct: 252 ELLDEMR 258
>gi|302806388|ref|XP_002984944.1| hypothetical protein SELMODRAFT_121294 [Selaginella moellendorffii]
gi|300147530|gb|EFJ14194.1| hypothetical protein SELMODRAFT_121294 [Selaginella moellendorffii]
Length = 468
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 36/131 (27%), Positives = 56/131 (42%), Gaps = 1/131 (0%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ CR+ + ++L D V NS++ YC+ G M+ + R++ A
Sbjct: 264 LIAGLCRAEKVIQARELFEKMTQACIPPDAVAYNSLIAGYCKRGSMDEAEKLYREMSGGA 323
Query: 61 -ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEA 119
+ P TF+ LI FCK A + +M KG + LI L + EA
Sbjct: 324 GLQPTIVTFNTLIDGFCKLGKLGRANELVAEMGTKGLAADTCTYRILIAGLSRATKLDEA 383
Query: 120 LSVYNMLRYSK 130
L VY +R K
Sbjct: 384 LEVYKQMREKK 394
Score = 38.1 bits (87), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 27/125 (21%), Positives = 55/125 (44%), Gaps = 2/125 (1%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKY--DVVLLNSMLCAYCRTGDMESVMHVMRKLDE 58
+I + G +E+ ++ + + Y +V+ ++++ CRTG++E + V + E
Sbjct: 192 LIHGLAKIGKLDESLKILSEMAMRAAGYVPNVITFSTLIHGLCRTGELEKALEVFGSMLE 251
Query: 59 LAISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSE 118
P+ T+ LI C+ + + A M + P+ +SLI K + E
Sbjct: 252 AGCKPNKYTYTTLIAGLCRAEKVIQARELFEKMTQACIPPDAVAYNSLIAGYCKRGSMDE 311
Query: 119 ALSVY 123
A +Y
Sbjct: 312 AEKLY 316
Score = 35.4 bits (80), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 27/103 (26%), Positives = 46/103 (44%), Gaps = 8/103 (7%)
Query: 29 DVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCK-----EKMYML 83
DV N ++ + R+ +ME V + + E PD ++HILI K E + +L
Sbjct: 150 DVFAFNGVMQGFARSNNMEKAREVYQHMVESGYKPDNVSYHILIHGLAKIGKLDESLKIL 209
Query: 84 AYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVYNML 126
+ + M G+ P S+LI L + +AL V+ +
Sbjct: 210 ---SEMAMRAAGYVPNVITFSTLIHGLCRTGELEKALEVFGSM 249
>gi|186478651|ref|NP_173362.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806505|sp|Q9LN69.2|PPR50_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At1g19290
gi|332191705|gb|AEE29826.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 904
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 47/81 (58%), Gaps = 1/81 (1%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYD-KYDVVLLNSMLCAYCRTGDMESVMHVMRKLDEL 59
+++A+CRSG ++ A + E+ + +VV NS++ Y GD+E + V+R + E
Sbjct: 231 VVNAYCRSGNVDKAMVFAKETESSLGLELNVVTYNSLINGYAMIGDVEGMTRVLRLMSER 290
Query: 60 AISPDYNTFHILIKYFCKEKM 80
+S + T+ LIK +CK+ +
Sbjct: 291 GVSRNVVTYTSLIKGYCKKGL 311
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 38/153 (24%), Positives = 79/153 (51%), Gaps = 14/153 (9%)
Query: 1 MISAFCRSGCFEETKQL---AGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLD 57
+I+ +C+SG E +Q+ D+ K D + N+++ YCR G ++ + + ++
Sbjct: 372 LINGYCKSGQLVEAEQIFSRMNDWSLKPDHHT---YNTLVDGYCRAGYVDEALKLCDQMC 428
Query: 58 ELAISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHS 117
+ + P T++IL+K + + + M ++G +E CS+L+ L K+ +
Sbjct: 429 QKEVVPTVMTYNILLKGYSRIGAFHDVLSLWKMMLKRGVNADEISCSTLLEALFKLGDFN 488
Query: 118 EALSVY-NMLRYSKRSMCKALHEKI-LHILISG 148
EA+ ++ N+L R + L + I L+++ISG
Sbjct: 489 EAMKLWENVL---ARGL---LTDTITLNVMISG 515
Score = 44.7 bits (104), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 22/126 (17%), Positives = 62/126 (49%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ +CR+G + ++ + + + + NS++ YC++G + + ++++ +
Sbjct: 337 LMDGYCRTGQIRDAVRVHDNMIEIGVRTNTTICNSLINGYCKSGQLVEAEQIFSRMNDWS 396
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ PD++T++ L+ +C+ A + M +K P + L+ ++ A + L
Sbjct: 397 LKPDHHTYNTLVDGYCRAGYVDEALKLCDQMCQKEVVPTVMTYNILLKGYSRIGAFHDVL 456
Query: 121 SVYNML 126
S++ M+
Sbjct: 457 SLWKMM 462
Score = 40.4 bits (93), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 38/79 (48%)
Query: 29 DVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYMLAYRTM 88
+VV S++ YC+ G ME HV L E + D + + +L+ +C+ A R
Sbjct: 295 NVVTYTSLIKGYCKKGLMEEAEHVFELLKEKKLVADQHMYGVLMDGYCRTGQIRDAVRVH 354
Query: 89 VDMHRKGHQPEEELCSSLI 107
+M G + +C+SLI
Sbjct: 355 DNMIEIGVRTNTTICNSLI 373
Score = 37.0 bits (84), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 22/107 (20%), Positives = 47/107 (43%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I +C+ G EE + + + K D + ++ YCRTG + + V + E+
Sbjct: 302 LIKGYCKKGLMEEAEHVFELLKEKKLVADQHMYGVLMDGYCRTGQIRDAVRVHDNMIEIG 361
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLI 107
+ + + LI +CK + A + M+ +P+ ++L+
Sbjct: 362 VRTNTTICNSLINGYCKSGQLVEAEQIFSRMNDWSLKPDHHTYNTLV 408
>gi|359473390|ref|XP_002268680.2| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
mitochondrial-like [Vitis vinifera]
Length = 748
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 30/121 (24%), Positives = 57/121 (47%), Gaps = 3/121 (2%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+++ C++G ++ +L D E D V +++ AYC++ +M ++R++ +
Sbjct: 504 LVNGLCKAGNIDQAVKLMKDMEVAGFHPDAVTYTTLMDAYCKSREMVRAHELLRQMLDRE 563
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHL---GKMRAHS 117
+ P TF++L+ FC M + + M KG P +SLI MRA +
Sbjct: 564 LQPTVVTFNVLMNGFCMSGMLEDGEKLLKWMLEKGIMPNATTYNSLIKQYCIRNNMRATT 623
Query: 118 E 118
E
Sbjct: 624 E 624
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 34/127 (26%), Positives = 58/127 (45%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+++ FC SG E+ ++L K + NS++ YC +M + + R +
Sbjct: 574 LMNGFCMSGMLEDGEKLLKWMLEKGIMPNATTYNSLIKQYCIRNNMRATTEIYRGMCAKG 633
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ PD NT++ILIK CK + A+ DM KG ++LI K + EA
Sbjct: 634 VVPDGNTYNILIKGHCKARNMKEAWFLHRDMVGKGFNLTVSSYNALIKGFYKRKKFLEAR 693
Query: 121 SVYNMLR 127
++ +R
Sbjct: 694 ELFEQMR 700
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 25/99 (25%), Positives = 47/99 (47%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ +C+ G + +L + + K K + N ++ C+TG + V+R++
Sbjct: 294 VINGYCQVGELQRVLKLIEEMQIKGLKPNPYTYNGVILLLCKTGKVAEAERVLREMISEG 353
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPE 99
I+PD + LI FCK AYR +M ++ P+
Sbjct: 354 IAPDGVIYTTLIDGFCKLGNVSSAYRLFDEMQKRKISPD 392
Score = 44.7 bits (104), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 29/129 (22%), Positives = 64/129 (49%)
Query: 4 AFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISP 63
+ C+ G E QL E + DV+ ++++ YC+ G+++ V+ ++ ++ + P
Sbjct: 262 SLCQLGRVVEAHQLLLQMELRGCIPDVISYSTVINGYCQVGELQRVLKLIEEMQIKGLKP 321
Query: 64 DYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVY 123
+ T++ +I CK A R + +M +G P+ + ++LI K+ S A ++
Sbjct: 322 NPYTYNGVILLLCKTGKVAEAERVLREMISEGIAPDGVIYTTLIDGFCKLGNVSSAYRLF 381
Query: 124 NMLRYSKRS 132
+ ++ K S
Sbjct: 382 DEMQKRKIS 390
Score = 43.9 bits (102), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 29/126 (23%), Positives = 63/126 (50%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C++G E +++ + ++ D V+ +++ +C+ G++ S + ++ +
Sbjct: 329 VILLLCKTGKVAEAERVLREMISEGIAPDGVIYTTLIDGFCKLGNVSSAYRLFDEMQKRK 388
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
ISPD+ T+ +I C+ M A + +M K +P+E ++LI K EA
Sbjct: 389 ISPDFITYTAVICGLCQTGRVMEADKLFHEMVCKRLEPDEVTYTALIDGYCKEGKMKEAF 448
Query: 121 SVYNML 126
S++N +
Sbjct: 449 SLHNQM 454
Score = 38.5 bits (88), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 19/98 (19%), Positives = 46/98 (46%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+ C+ G + +L + K + ++ NS++ C+ G+++ + +M+ ++
Sbjct: 469 LADGLCKCGEVDTANELLHEMCRKGLELNIYTYNSLVNGLCKAGNIDQAVKLMKDMEVAG 528
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQP 98
PD T+ L+ +CK + + A+ + M + QP
Sbjct: 529 FHPDAVTYTTLMDAYCKSREMVRAHELLRQMLDRELQP 566
Score = 37.0 bits (84), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 25/102 (24%), Positives = 43/102 (42%), Gaps = 6/102 (5%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I FC+ G +L + + + D + +++C C+TG VM + E+
Sbjct: 364 LIDGFCKLGNVSSAYRLFDEMQKRKISPDFITYTAVICGLCQTG---RVMEADKLFHEMV 420
Query: 61 ---ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPE 99
+ PD T+ LI +CKE A+ M + G P
Sbjct: 421 CKRLEPDEVTYTALIDGYCKEGKMKEAFSLHNQMLQMGLTPN 462
Score = 35.4 bits (80), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 22/95 (23%), Positives = 44/95 (46%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C++G E +L + K + D V +++ YC+ G M+ + ++ ++
Sbjct: 399 VICGLCQTGRVMEADKLFHEMVCKRLEPDEVTYTALIDGYCKEGKMKEAFSLHNQMLQMG 458
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKG 95
++P+ T+ L CK A + +M RKG
Sbjct: 459 LTPNIVTYTALADGLCKCGEVDTANELLHEMCRKG 493
>gi|145358679|ref|NP_198856.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75171831|sp|Q9FND8.1|PP409_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g40400
gi|10178151|dbj|BAB11596.1| salt-inducible protein-like [Arabidopsis thaliana]
gi|110742507|dbj|BAE99171.1| hypothetical protein [Arabidopsis thaliana]
gi|332007160|gb|AED94543.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 610
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 43/164 (26%), Positives = 76/164 (46%), Gaps = 9/164 (5%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+ + FC F E E + + D+V N+++ +YCR G ++ ++ + +
Sbjct: 242 LTNVFCNDSNFREVDDFLEKMEEEGFEPDLVTYNTLVSSYCRRGRLKEAFYLYKIMYRRR 301
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGK--MRAHSE 118
+ PD T+ LIK CK+ A++T M +G +P+ ++LI+ K M S+
Sbjct: 302 VVPDLVTYTSLIKGLCKDGRVREAHQTFHRMVDRGIKPDCMSYNTLIYAYCKEGMMQQSK 361
Query: 119 ALSVYNMLRYS---KRSMCKALHEKILHILISGKLLKDAYIVVK 159
L ++ ML S R CK + E + G+LL VV+
Sbjct: 362 KL-LHEMLGNSVVPDRFTCKVIVEGFVR---EGRLLSAVNFVVE 401
Score = 40.4 bits (93), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 41/166 (24%), Positives = 70/166 (42%), Gaps = 20/166 (12%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C+ G E Q + K D + N+++ AYC+ G M+ ++ ++ +
Sbjct: 312 LIKGLCKDGRVREAHQTFHRMVDRGIKPDCMSYNTLIYAYCKEGMMQQSKKLLHEMLGNS 371
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHL---GKMRA-- 115
+ PD T ++++ F +E + A +V++ R E+C LI L GK A
Sbjct: 372 VVPDRFTCKVIVEGFVREGRLLSAVNFVVELRRLKVDIPFEVCDFLIVSLCQEGKPFAAK 431
Query: 116 -----------HSEALSVYNMLRYSKRSMCKALHEKILHILISGKL 150
H YN L S S C A+ E +++ GKL
Sbjct: 432 HLLDRIIEEEGHEAKPETYNNLIES-LSRCDAIEEA---LVLKGKL 473
Score = 35.0 bits (79), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 29/129 (22%), Positives = 60/129 (46%), Gaps = 3/129 (2%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I A+C+ G +++K+L + D ++ + R G + S ++ + +L L
Sbjct: 347 LIYAYCKEGMMQQSKKLLHEMLGNSVVPDRFTCKVIVEGFVREGRLLSAVNFVVELRRLK 406
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVD--MHRKGHQPEEELCSSLIFHLGKMRAHSE 118
+ + LI C+E A + ++D + +GH+ + E ++LI L + A E
Sbjct: 407 VDIPFEVCDFLIVSLCQEGK-PFAAKHLLDRIIEEEGHEAKPETYNNLIESLSRCDAIEE 465
Query: 119 ALSVYNMLR 127
AL + L+
Sbjct: 466 ALVLKGKLK 474
>gi|357125910|ref|XP_003564632.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g09060-like isoform 1 [Brachypodium distachyon]
gi|357125912|ref|XP_003564633.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g09060-like isoform 2 [Brachypodium distachyon]
Length = 704
Score = 49.7 bits (117), Expect = 4e-04, Method: Composition-based stats.
Identities = 36/154 (23%), Positives = 67/154 (43%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
MIS C+ G ++ +L K + + N+++ +C+ + V ++ E
Sbjct: 446 MISGLCKDGRLDDAVKLYEKISMDSFKPNSHIYNALINGFCQASKFSDAIRVYSQMAEND 505
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
SP T++ LI CK + Y+ A R +M KG + SLI L + + AL
Sbjct: 506 CSPTTITYNTLIHGLCKAEKYLEASRFTREMLEKGCMLDVNTYGSLIRGLCRDKKIDGAL 565
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLKDA 154
+++N + +H ++H L S + +A
Sbjct: 566 ALWNQILDKGLQTDVVMHNILIHGLCSAGKVDEA 599
Score = 41.2 bits (95), Expect = 0.13, Method: Composition-based stats.
Identities = 26/119 (21%), Positives = 49/119 (41%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
MI C G ++ Q+ + + D +SM+ C+ G ++ + + K+ +
Sbjct: 411 MIHGLCEKGFANKSLQILEEARTSGKELDEFSYSSMISGLCKDGRLDDAVKLYEKISMDS 470
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEA 119
P+ + ++ LI FC+ + A R M P ++LI L K + EA
Sbjct: 471 FKPNSHIYNALINGFCQASKFSDAIRVYSQMAENDCSPTTITYNTLIHGLCKAEKYLEA 529
Score = 40.8 bits (94), Expect = 0.17, Method: Composition-based stats.
Identities = 19/76 (25%), Positives = 38/76 (50%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
M+ C+ G F+E + A + D++ +M+ CR+ D++S V ++ +
Sbjct: 271 MLDGLCKLGMFKEAGDVWERMVANNHQPDMITYGTMIHGLCRSTDVDSAARVYSEMIKTG 330
Query: 61 ISPDYNTFHILIKYFC 76
+ PD ++ L+K FC
Sbjct: 331 LVPDVVIYNSLLKGFC 346
Score = 38.9 bits (89), Expect = 0.79, Method: Composition-based stats.
Identities = 29/125 (23%), Positives = 54/125 (43%), Gaps = 1/125 (0%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKL-DEL 59
++S F ++ + L + + + D V N++L R G+ E M V +L +
Sbjct: 200 LMSGFVKNNRLDNALYLLDEMPSYEVQPDAVCYNALLGGCFRNGEFEKAMRVWEQLVRDP 259
Query: 60 AISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEA 119
SP+ T+++++ CK M+ A M HQP+ ++I L + A
Sbjct: 260 GASPNLATYNVMLDGLCKLGMFKEAGDVWERMVANNHQPDMITYGTMIHGLCRSTDVDSA 319
Query: 120 LSVYN 124
VY+
Sbjct: 320 ARVYS 324
>gi|413917168|gb|AFW57100.1| hypothetical protein ZEAMMB73_992270 [Zea mays]
Length = 442
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 34/136 (25%), Positives = 65/136 (47%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
M+ A+ ++G EE + + K+D N M+ Y R G ++ V +V+ +L +
Sbjct: 305 MLDAYGKAGRLEEFASVLQKMKRAKCKFDHYTYNIMINIYGRRGWIQDVSNVLAELKDRG 364
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ PD +++ LIK + +M A + M +M KG P+ ++LI L + EA+
Sbjct: 365 VEPDLYSYNTLIKAYGIARMPEDAVKLMQEMRVKGISPDRVTYANLIAALQRNENFLEAV 424
Query: 121 SVYNMLRYSKRSMCKA 136
++ + + C A
Sbjct: 425 KWSLWMKQTGVAGCGA 440
>gi|224142151|ref|XP_002324422.1| predicted protein [Populus trichocarpa]
gi|222865856|gb|EEF02987.1| predicted protein [Populus trichocarpa]
Length = 453
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 32/127 (25%), Positives = 58/127 (45%), Gaps = 1/127 (0%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+++A R F+ +L E K D +L NS++ A+ +G+M+ M + RK+ E
Sbjct: 54 LVAALTRQKLFKSILRLISKVEENGMKPDSILFNSIINAFSESGNMKEAMKLFRKMKESG 113
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
P +TF+ LIK + A + + + G +P + + L+ EA
Sbjct: 114 CKPTTSTFNTLIKGYGNAGKTEEALKLLEFLQDGGVKPNQRTYNILVRAWCNKENMEEAW 173
Query: 121 S-VYNML 126
+ VY M+
Sbjct: 174 NMVYKMV 180
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/99 (23%), Positives = 47/99 (47%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+AF SG +E +L + K N+++ Y G E + ++ L +
Sbjct: 89 IINAFSESGNMKEAMKLFRKMKESGCKPTTSTFNTLIKGYGNAGKTEEALKLLEFLQDGG 148
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPE 99
+ P+ T++IL++ +C ++ A+ + M G QP+
Sbjct: 149 VKPNQRTYNILVRAWCNKENMEEAWNMVYKMVASGMQPD 187
Score = 43.9 bits (102), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 38/72 (52%)
Query: 29 DVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYMLAYRTM 88
+VV+ +++ +C G ME M V K+ E+ +SP+ T+ LI + + K + A +
Sbjct: 362 NVVICTTVISGWCSAGKMEHAMKVYEKMCEIGVSPNLKTYETLIWGYGEAKQPLKAEELL 421
Query: 89 VDMHRKGHQPEE 100
M KG P++
Sbjct: 422 QVMEEKGVFPKK 433
Score = 38.5 bits (88), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 22/97 (22%), Positives = 42/97 (43%)
Query: 27 KYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYMLAYR 86
+ DVV ++++ A+ G M+ + + + I PD + F IL K + + A
Sbjct: 290 RPDVVTFSTIMNAWSSAGRMDKCKEIFNDMVKAEIEPDIHAFSILAKGYVRAGEPEKAES 349
Query: 87 TMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVY 123
+ M + G P +C+++I A+ VY
Sbjct: 350 ILTSMRKYGVHPNVVICTTVISGWCSAGKMEHAMKVY 386
Score = 35.8 bits (81), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 25/107 (23%), Positives = 47/107 (43%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ A+C EE + A + D V N++ AY G+ ++ ++
Sbjct: 159 LVRAWCNKENMEEAWNMVYKMVASGMQPDAVTYNTLARAYAEKGETIRAEEMILEMLNRR 218
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLI 107
++P+ T I++ +CKE + A R + M G P + +SLI
Sbjct: 219 VTPNERTCSIIVNGYCKEGNMVDASRFVFRMKELGVLPNLFVFNSLI 265
>gi|125562258|gb|EAZ07706.1| hypothetical protein OsI_29963 [Oryza sativa Indica Group]
Length = 465
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 34/159 (21%), Positives = 69/159 (43%), Gaps = 2/159 (1%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ R+G EE K A + DV NS+ A C +GD+E + ++
Sbjct: 264 LVDGLVRAGRLEEAKAFALRMTKEGVLPDVATFNSLAEALCSSGDVEFAVALLADASSRG 323
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ PD +T+ ++I K A+R GH+P L +++I L K ++A
Sbjct: 324 LCPDISTYKVMIPAVAKAGRIDEAFRLFYAALEDGHRPFPSLYAAIIKALCKAGRFADAF 383
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLKDA--YIV 157
+ + ++ + ++ ++ + + G +A Y+V
Sbjct: 384 AFFGDMKSKGHPPNRPVYVMLVKMCVRGGRFVEAANYLV 422
Score = 38.9 bits (89), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 17/66 (25%), Positives = 29/66 (43%)
Query: 34 NSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHR 93
N++L A C G ++R++ ++PD TF L+ +C A + DM
Sbjct: 192 NALLDALCANGSFAGAYKLLRRMARKGVAPDRATFSTLVDAWCAAGKLREAQAFLDDMAE 251
Query: 94 KGHQPE 99
+G P
Sbjct: 252 RGFHPP 257
>gi|125604075|gb|EAZ43400.1| hypothetical protein OsJ_28005 [Oryza sativa Japonica Group]
Length = 461
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 34/159 (21%), Positives = 69/159 (43%), Gaps = 2/159 (1%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ R+G EE K A + DV NS+ A C +GD+E + ++
Sbjct: 260 LVDGLVRAGRLEEAKAFALRMTKEGVLPDVATFNSLAEALCSSGDVEFAVALLADASSRG 319
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ PD +T+ ++I K A+R GH+P L +++I L K ++A
Sbjct: 320 LCPDISTYKVMIPAVAKAGRIDEAFRLFYAALEDGHRPFPSLYAAIIKALCKAGRFADAF 379
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLKDA--YIV 157
+ + ++ + ++ ++ + + G +A Y+V
Sbjct: 380 AFFGDMKSKGHPPNRPVYVMLVKMCVRGGRFVEAANYLV 418
Score = 38.9 bits (89), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 17/66 (25%), Positives = 29/66 (43%)
Query: 34 NSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHR 93
N++L A C G ++R++ ++PD TF L+ +C A + DM
Sbjct: 188 NALLDALCANGSFAGAYKLLRRMARKGVAPDRATFSTLVDAWCAAGKLREAQAFLDDMAE 247
Query: 94 KGHQPE 99
+G P
Sbjct: 248 RGFHPP 253
>gi|405122752|gb|AFR97518.1| hypothetical protein CNAG_04700 [Cryptococcus neoformans var.
grubii H99]
Length = 760
Score = 49.7 bits (117), Expect = 4e-04, Method: Composition-based stats.
Identities = 25/84 (29%), Positives = 45/84 (53%)
Query: 29 DVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYMLAYRTM 88
+++ +N++L Y R ++E++ + K EL + PD T+ L++ + + LA M
Sbjct: 525 NLITINTVLRHYAREANIEAMSALFNKAGELKLQPDVVTYTTLVQGLLRARRLDLAKGAM 584
Query: 89 VDMHRKGHQPEEELCSSLIFHLGK 112
M ++G P E +CS LI L K
Sbjct: 585 DAMQKQGIVPNERMCSMLIADLAK 608
>gi|357120470|ref|XP_003561950.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Brachypodium distachyon]
Length = 925
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 29/123 (23%), Positives = 50/123 (40%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+A C+ G + + + K D SM+ YCR D++S + ++DE
Sbjct: 234 VINALCKDGNVRDAESIINKVFKSGMKPDTFTYTSMILGYCRNRDLDSAFEIFNRMDEEG 293
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
P+ T+ LI C A + +M R G P ++ I L M +A
Sbjct: 294 CEPNAATYSTLINGLCNSGRVNEALDFISEMTRHGVLPTVHTFTAPIVALCDMGRIEDAW 353
Query: 121 SVY 123
++
Sbjct: 354 KIF 356
Score = 44.7 bits (104), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 32/115 (27%), Positives = 53/115 (46%), Gaps = 4/115 (3%)
Query: 34 NSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHR 93
N ++ YC GD E M ++ + + +P T++I+IK +C +A R + M
Sbjct: 439 NELIRGYCTIGDTEKAMSMLTNMLKGRPTPTLVTYNIIIKGYCDSGDTDVAIRVLELMKA 498
Query: 94 KGHQPEEELCSSLIFHLGKMRAHSEALSVYNMLRYSKRSMCKALHEKILHILISG 148
G QP+E + LI K+ A ++N + R +C +E LISG
Sbjct: 499 NGCQPDEWSYTELISGFCKISKMELASGMFNEMM--DRGLCP--NEVTYTALISG 549
Score = 40.0 bits (92), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 38/149 (25%), Positives = 62/149 (41%), Gaps = 6/149 (4%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I +C G E+ + + +V N ++ YC +GD + + V+ +
Sbjct: 441 LIRGYCTIGDTEKAMSMLTNMLKGRPTPTLVTYNIIIKGYCDSGDTDVAIRVLELMKANG 500
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
PD ++ LI FCK LA +M +G P E ++LI K E L
Sbjct: 501 CQPDEWSYTELISGFCKISKMELASGMFNEMMDRGLCPNEVTYTALISGYCK----DEKL 556
Query: 121 S-VYNMLRYSKRSMCKALHEKILHILISG 148
ML KRS C+ + + ++LI G
Sbjct: 557 DCAARMLERMKRSGCRP-NVQTYNVLIHG 584
Score = 38.9 bits (89), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 28/130 (21%), Positives = 61/130 (46%), Gaps = 2/130 (1%)
Query: 27 KYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYMLAYR 86
+ ++++ NS++ A C+ G++ ++ K+ + + PD T+ +I +C+ + A+
Sbjct: 225 QPNLLIYNSVINALCKDGNVRDAESIINKVFKSGMKPDTFTYTSMILGYCRNRDLDSAFE 284
Query: 87 TMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEALS-VYNMLRYSKRSMCKALHEKILHIL 145
M +G +P S+LI L +EAL + M R+ I+ +
Sbjct: 285 IFNRMDEEGCEPNAATYSTLINGLCNSGRVNEALDFISEMTRHGVLPTVHTFTAPIVALC 344
Query: 146 ISGKLLKDAY 155
G+ ++DA+
Sbjct: 345 DMGR-IEDAW 353
Score = 37.0 bits (84), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 27/119 (22%), Positives = 52/119 (43%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I +C SG + ++ +A + D ++ +C+ ME + ++ +
Sbjct: 476 IIKGYCDSGDTDVAIRVLELMKANGCQPDEWSYTELISGFCKISKMELASGMFNEMMDRG 535
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEA 119
+ P+ T+ LI +CK++ A R + M R G +P + + LI L K S A
Sbjct: 536 LCPNEVTYTALISGYCKDEKLDCAARMLERMKRSGCRPNVQTYNVLIHGLTKQNNFSGA 594
>gi|225432159|ref|XP_002274904.1| PREDICTED: pentatricopeptide repeat-containing protein At3g06430,
chloroplastic [Vitis vinifera]
Length = 498
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 45/82 (54%), Gaps = 1/82 (1%)
Query: 1 MISAFCRSGCFEE-TKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDEL 59
++S + ++G F+E K L+G E+ K DV +N++L + G +E + K
Sbjct: 256 VLSGYGKAGKFDEMEKVLSGMLESTSSKPDVWTMNTILSLFGNKGQIEIMEKWYEKFRNF 315
Query: 60 AISPDYNTFHILIKYFCKEKMY 81
I P+ TF+ILI + K++MY
Sbjct: 316 GIEPETRTFNILIGAYGKKRMY 337
>gi|326490085|dbj|BAJ94116.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 641
Score = 49.7 bits (117), Expect = 4e-04, Method: Composition-based stats.
Identities = 25/107 (23%), Positives = 51/107 (47%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++SA C GC +E +L + + D+V N++L C + V +M ++ +
Sbjct: 184 VVSAICEQGCVDEGVELLRKLPSFGCEPDIVSYNAVLKGLCMAKRWDDVEELMVEMVRVG 243
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLI 107
P+ TF+ LI Y C+ ++ + + M G P+ + +++I
Sbjct: 244 CPPNVATFNTLIAYLCRNGLFEQVHEALSQMPEHGCTPDLRMYATII 290
Score = 44.3 bits (103), Expect = 0.017, Method: Composition-based stats.
Identities = 34/124 (27%), Positives = 54/124 (43%), Gaps = 3/124 (2%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ A CR G F + AK D N ++ A C G ++ + ++RKL
Sbjct: 149 ILEAACRGGGFRSAVRALQVLHAKGCTLDSGNCNLVVSAICEQGCVDEGVELLRKLPSFG 208
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHL---GKMRAHS 117
PD +++ ++K C K + MV+M R G P ++LI +L G
Sbjct: 209 CEPDIVSYNAVLKGLCMAKRWDDVEELMVEMVRVGCPPNVATFNTLIAYLCRNGLFEQVH 268
Query: 118 EALS 121
EALS
Sbjct: 269 EALS 272
Score = 43.5 bits (101), Expect = 0.026, Method: Composition-based stats.
Identities = 31/126 (24%), Positives = 55/126 (43%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ FC+ G +E L + A K + + +L CR ++ + +
Sbjct: 394 VINGFCKEGLVDEAVMLLKNMSACGCKPNTISYTIVLKGLCRAERWVDAQELISHMIQQG 453
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
P+ TF+ LI + CK+ + A + M G P+ S++I LGK EAL
Sbjct: 454 CLPNPVTFNTLINFMCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEAL 513
Query: 121 SVYNML 126
+ N++
Sbjct: 514 ELLNVM 519
Score = 38.9 bits (89), Expect = 0.70, Method: Composition-based stats.
Identities = 23/98 (23%), Positives = 47/98 (47%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ C + +EE + L + + D V N ++ +C+ G ++ V+ ++ ++ E
Sbjct: 324 VLKGLCSAERWEEAEDLLAEMFQEDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLEHG 383
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQP 98
PD T+ +I FCKE + A + +M G +P
Sbjct: 384 CIPDVITYTTVINGFCKEGLVDEAVMLLKNMSACGCKP 421
>gi|297834384|ref|XP_002885074.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297330914|gb|EFH61333.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 517
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 52/114 (45%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+++ +C G E K++ D A K DVV +M+ A + G + M + R L E
Sbjct: 247 ILNGWCVLGNVHEAKRIWKDIIASKCKPDVVSYGTMINALTKKGKLGKAMELYRALWETG 306
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMR 114
+PD + +I C +K A +M KG P +SL+ HL K+R
Sbjct: 307 RNPDVKICNNVIDALCFKKRIPEALEVFKEMSEKGPSPNVVTYNSLLKHLCKIR 360
Score = 37.7 bits (86), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 22/95 (23%), Positives = 44/95 (46%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
MI+A + G + +L DV + N+++ A C + + V +++ E
Sbjct: 282 MINALTKKGKLGKAMELYRALWETGRNPDVKICNNVIDALCFKKRIPEALEVFKEMSEKG 341
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKG 95
SP+ T++ L+K+ CK + + + +M KG
Sbjct: 342 PSPNVVTYNSLLKHLCKIRRTEKVWELVEEMEHKG 376
>gi|218200036|gb|EEC82463.1| hypothetical protein OsI_26904 [Oryza sativa Indica Group]
Length = 346
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 29/120 (24%), Positives = 57/120 (47%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ +C+SG +E+ ++ + K + DVV+ ++ + C+ G + VM +
Sbjct: 191 LLQGYCKSGRWEDVGKVFVEMSEKGIEPDVVMYTGLIDSLCKVGKAKKAHGVMDMMVRRG 250
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ P+ T+++LI CKE A + M KG P+ ++LI L + EA+
Sbjct: 251 LEPNVVTYNVLINCMCKEGSVKEAIGVLKKMSEKGVAPDVVTYNTLIKGLSDVLEMDEAM 310
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/122 (27%), Positives = 57/122 (46%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C + ++ +L G+ + +VV+ +S+L YC++G E V V ++ E
Sbjct: 156 LIRGLCDAAEVDKAVELMGEMCESGIEPNVVVYSSLLQGYCKSGRWEDVGKVFVEMSEKG 215
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
I PD + LI CK A+ M M R+G +P + LI + K + EA+
Sbjct: 216 IEPDVVMYTGLIDSLCKVGKAKKAHGVMDMMVRRGLEPNVVTYNVLINCMCKEGSVKEAI 275
Query: 121 SV 122
V
Sbjct: 276 GV 277
Score = 42.7 bits (99), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 23/100 (23%), Positives = 50/100 (50%)
Query: 27 KYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYMLAYR 86
+ DVV +++ C +++ + +M ++ E I P+ + L++ +CK + +
Sbjct: 147 RADVVTYGTLIRGLCDAAEVDKAVELMGEMCESGIEPNVVVYSSLLQGYCKSGRWEDVGK 206
Query: 87 TMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVYNML 126
V+M KG +P+ + + LI L K+ +A V +M+
Sbjct: 207 VFVEMSEKGIEPDVVMYTGLIDSLCKVGKAKKAHGVMDMM 246
>gi|22296415|dbj|BAC10183.1| pentatricopeptide repeat protein-like [Oryza sativa Japonica Group]
Length = 624
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 29/120 (24%), Positives = 57/120 (47%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ +C+SG +E+ ++ + K + DVV+ ++ + C+ G + VM +
Sbjct: 191 LLQGYCKSGRWEDVGKVFVEMSEKGIEPDVVMYTGLIDSLCKVGKAKKAHGVMDMMVRRG 250
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ P+ T+++LI CKE A + M KG P+ ++LI L + EA+
Sbjct: 251 LEPNVVTYNVLINCMCKEGSVKEAIGVLKKMSEKGVAPDVVTYNTLIKGLSDVLEMDEAM 310
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 26/107 (24%), Positives = 51/107 (47%), Gaps = 1/107 (0%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ A C G E + L + + + DVV ++M+ C+ GD+++ +++ + +
Sbjct: 438 LLVAMCEQGMMERARNLFNEMDNNF-PLDVVAYSTMIHGACKAGDLKTAKELLKSIVDEG 496
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLI 107
++PD T+ I+I F K A + M G P+ + SLI
Sbjct: 497 LTPDAVTYSIVINMFAKSGDMEAANGVLKQMTASGFLPDVAVFDSLI 543
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/122 (27%), Positives = 57/122 (46%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C + ++ +L G+ + +VV+ +S+L YC++G E V V ++ E
Sbjct: 156 LIRGLCDAAEVDKAVELMGEMCESGIEPNVVVYSSLLQGYCKSGRWEDVGKVFVEMSEKG 215
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
I PD + LI CK A+ M M R+G +P + LI + K + EA+
Sbjct: 216 IEPDVVMYTGLIDSLCKVGKAKKAHGVMDMMVRRGLEPNVVTYNVLINCMCKEGSVKEAI 275
Query: 121 SV 122
V
Sbjct: 276 GV 277
Score = 42.4 bits (98), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 26/126 (20%), Positives = 58/126 (46%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ A C ++ L + + DVV +++ C +++ + +M ++ E
Sbjct: 121 LMRALCADRLADQAVGLLRSMRSAGVRADVVTYGTLIRGLCDAAEVDKAVELMGEMCESG 180
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
I P+ + L++ +CK + + V+M KG +P+ + + LI L K+ +A
Sbjct: 181 IEPNVVVYSSLLQGYCKSGRWEDVGKVFVEMSEKGIEPDVVMYTGLIDSLCKVGKAKKAH 240
Query: 121 SVYNML 126
V +M+
Sbjct: 241 GVMDMM 246
Score = 40.8 bits (94), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 42/99 (42%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C G + Q+ E ++V N ++ R + M +M ++ L
Sbjct: 333 VIQGLCDIGRMRQAFQVRAMMEETGCMVNLVTYNLLIGGLLRVHKVRKAMELMDEMTSLG 392
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPE 99
+ PD T+ ILIK FCK A + M +G +PE
Sbjct: 393 LEPDSFTYSILIKGFCKMWQVDRAEDLLSTMRDRGIEPE 431
>gi|297607630|ref|NP_001060305.2| Os07g0621100 [Oryza sativa Japonica Group]
gi|255677977|dbj|BAF22219.2| Os07g0621100 [Oryza sativa Japonica Group]
Length = 734
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 26/107 (24%), Positives = 51/107 (47%), Gaps = 1/107 (0%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ A C G E + L + + + DVV ++M+ C+ GD+++ +++ + +
Sbjct: 438 LLVAMCEQGMMERARNLFNEMDNNF-PLDVVAYSTMIHGACKAGDLKTAKELLKSIVDEG 496
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLI 107
++PD T+ I+I F K A + M G P+ + SLI
Sbjct: 497 LTPDAVTYSIVINMFAKSGDMEAANGVLKQMTASGFLPDVAVFDSLI 543
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 29/120 (24%), Positives = 57/120 (47%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ +C+SG +E+ ++ + K + DVV+ ++ + C+ G + VM +
Sbjct: 191 LLQGYCKSGRWEDVGKVFVEMSEKGIEPDVVMYTGLIDSLCKVGKAKKAHGVMDMMVRRG 250
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ P+ T+++LI CKE A + M KG P+ ++LI L + EA+
Sbjct: 251 LEPNVVTYNVLINCMCKEGSVKEAIGVLKKMSEKGVAPDVVTYNTLIKGLSDVLEMDEAM 310
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/122 (27%), Positives = 57/122 (46%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C + ++ +L G+ + +VV+ +S+L YC++G E V V ++ E
Sbjct: 156 LIRGLCDAAEVDKAVELMGEMCESGIEPNVVVYSSLLQGYCKSGRWEDVGKVFVEMSEKG 215
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
I PD + LI CK A+ M M R+G +P + LI + K + EA+
Sbjct: 216 IEPDVVMYTGLIDSLCKVGKAKKAHGVMDMMVRRGLEPNVVTYNVLINCMCKEGSVKEAI 275
Query: 121 SV 122
V
Sbjct: 276 GV 277
Score = 42.4 bits (98), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 26/126 (20%), Positives = 58/126 (46%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ A C ++ L + + DVV +++ C +++ + +M ++ E
Sbjct: 121 LMRALCADRLADQAVGLLRSMRSAGVRADVVTYGTLIRGLCDAAEVDKAVELMGEMCESG 180
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
I P+ + L++ +CK + + V+M KG +P+ + + LI L K+ +A
Sbjct: 181 IEPNVVVYSSLLQGYCKSGRWEDVGKVFVEMSEKGIEPDVVMYTGLIDSLCKVGKAKKAH 240
Query: 121 SVYNML 126
V +M+
Sbjct: 241 GVMDMM 246
Score = 40.8 bits (94), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 42/99 (42%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C G + Q+ E ++V N ++ R + M +M ++ L
Sbjct: 333 VIQGLCDIGRMRQAFQVRAMMEETGCMVNLVTYNLLIGGLLRVHKVRKAMELMDEMTSLG 392
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPE 99
+ PD T+ ILIK FCK A + M +G +PE
Sbjct: 393 LEPDSFTYSILIKGFCKMWQVDRAEDLLSTMRDRGIEPE 431
>gi|125540047|gb|EAY86442.1| hypothetical protein OsI_07823 [Oryza sativa Indica Group]
Length = 703
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 34/121 (28%), Positives = 51/121 (42%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C G E +L E D N+++ A C+ G + + L+
Sbjct: 258 LIRGQCIDGHIESAFRLLRLMEGDGLIADQYTYNALINALCKDGRTDQACSLFDSLETRG 317
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
I P+ TF+ LI CK +A++ + M G P+ SS I HL KM+ E L
Sbjct: 318 IKPNAVTFNSLINGLCKSGKVDIAWKFLEKMVSAGCTPDTYTYSSFIEHLCKMKGSQEGL 377
Query: 121 S 121
S
Sbjct: 378 S 378
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 30/127 (23%), Positives = 61/127 (48%), Gaps = 4/127 (3%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I FC +G +E +L G+ D+ D+ + +++ C+ G E + ++R++ EL
Sbjct: 87 LIEGFCETGRIDEAVELFGEM----DQPDMHMYAALVKGLCKAGRGEEGLLMLRRMKELG 142
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
P + ++ + C E+ A + +M KG P C+++I K S+AL
Sbjct: 143 WRPSTRAYAAVVDFRCWERKAKEAEEMLQEMFEKGLAPCVVTCTAVINAYCKEGRMSDAL 202
Query: 121 SVYNMLR 127
V +++
Sbjct: 203 RVLELMK 209
Score = 43.9 bits (102), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 23/98 (23%), Positives = 46/98 (46%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+A C+ G ++ L E + K + V NS++ C++G ++ + K+
Sbjct: 293 LINALCKDGRTDQACSLFDSLETRGIKPNAVTFNSLINGLCKSGKVDIAWKFLEKMVSAG 352
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQP 98
+PD T+ I++ CK K + +M +K +P
Sbjct: 353 CTPDTYTYSSFIEHLCKMKGSQEGLSFIGEMLQKDVKP 390
Score = 42.4 bits (98), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 28/126 (22%), Positives = 63/126 (50%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+A+C+ G + ++ + + K +V N+++ +C G + M ++ K+
Sbjct: 188 VINAYCKEGRMSDALRVLELMKLRGCKPNVWTYNALVQGFCNEGKVHKAMALLNKMRVCG 247
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
++PD T+++LI+ C + A+R + M G ++ ++LI L K +A
Sbjct: 248 VNPDAVTYNLLIRGQCIDGHIESAFRLLRLMEGDGLIADQYTYNALINALCKDGRTDQAC 307
Query: 121 SVYNML 126
S+++ L
Sbjct: 308 SLFDSL 313
Score = 35.8 bits (81), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 26/112 (23%), Positives = 44/112 (39%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ FC G + L D V N ++ C G +ES ++R ++
Sbjct: 223 LVQGFCNEGKVHKAMALLNKMRVCGVNPDAVTYNLLIRGQCIDGHIESAFRLLRLMEGDG 282
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGK 112
+ D T++ LI CK+ A + +G +P +SLI L K
Sbjct: 283 LIADQYTYNALINALCKDGRTDQACSLFDSLETRGIKPNAVTFNSLINGLCK 334
>gi|449461475|ref|XP_004148467.1| PREDICTED: pentatricopeptide repeat-containing protein At3g54980,
mitochondrial-like [Cucumis sativus]
Length = 775
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 35/142 (24%), Positives = 68/142 (47%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C++G E + L F ++ + N+++ + + G++ +V R++ E+
Sbjct: 478 IIKGLCKAGRSFEGRDLFNKFVSQGFVPTCMPYNTIIDGFIKEGNINLASNVYREMCEVG 537
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
I+P T+ LI FCK LA + + DM RKG + + + +LI K R A
Sbjct: 538 ITPSTVTYTSLIDGFCKGNNIDLALKLLNDMKRKGLKMDIKAYGTLIDGFCKRRDMKSAH 597
Query: 121 SVYNMLRYSKRSMCKALHEKIL 142
+ N LR + S + ++ ++
Sbjct: 598 ELLNELRGAGLSPNRFIYNSMI 619
Score = 39.3 bits (90), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 26/124 (20%), Positives = 57/124 (45%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+A + G E +L D ++ + S++ YC G++ S + ++ ++ E
Sbjct: 234 VITACVKEGNVAEALRLKDDMVNCGKSMNLAVATSLMKGYCMQGNLRSALVLVNEISESG 293
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ P+ T+ +LI CK A+ +M KG + +S++ K ++ A
Sbjct: 294 LVPNKVTYSVLIDGCCKNGNIEKAFEFYSEMKTKGIRSSVYSLNSILEGYLKCQSWQNAF 353
Query: 121 SVYN 124
+++N
Sbjct: 354 TMFN 357
Score = 36.6 bits (83), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 15/73 (20%), Positives = 37/73 (50%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ C G FE +++ D K V++ N+++ + + G+++ + ++ +
Sbjct: 688 LINGLCNKGQFENARKILEDMNGKNMIPSVLIYNTLIAGHFKEGNLQEAFRLHDEMLDRG 747
Query: 61 ISPDYNTFHILIK 73
+ PD T+ IL+
Sbjct: 748 LVPDNITYDILVN 760
Score = 36.6 bits (83), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 26/123 (21%), Positives = 52/123 (42%), Gaps = 1/123 (0%)
Query: 30 VVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYMLAYRTMV 89
V S++ +C+ +++ + ++ + + D + LI FCK + A+ +
Sbjct: 542 TVTYTSLIDGFCKGNNIDLALKLLNDMKRKGLKMDIKAYGTLIDGFCKRRDMKSAHELLN 601
Query: 90 DMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVY-NMLRYSKRSMCKALHEKILHILISG 148
++ G P + +S+I M EA+ +Y M+ K I +L SG
Sbjct: 602 ELRGAGLSPNRFIYNSMITGFKNMNNVEEAIDLYKKMVNEGIPCDLKTYTSLIDGLLKSG 661
Query: 149 KLL 151
+LL
Sbjct: 662 RLL 664
>gi|296088147|emb|CBI35592.3| unnamed protein product [Vitis vinifera]
Length = 883
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 29/122 (23%), Positives = 56/122 (45%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ +C+ G QL E K ++ N ++ CR ++R++ +
Sbjct: 376 LINGYCKEGWVVSAFQLLSVMEKGNCKPNIRTYNELMEGLCRVSKSYKAFLLLRRVVDNG 435
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ PD T++IL+ FCKE +A+ M+ G +P+ ++LI L K+ +A
Sbjct: 436 LLPDRVTYNILVDGFCKEGQLNMAFNIFNSMNSAGLEPDGFTFTALIDGLCKLGRLEQAN 495
Query: 121 SV 122
+
Sbjct: 496 GI 497
Score = 38.5 bits (88), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 18/59 (30%), Positives = 30/59 (50%)
Query: 41 CRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPE 99
CR G +E V RK+ + + P TF+ LI +CKE + A++ + M + +P
Sbjct: 346 CREGKIEEANGVFRKMLKHGLCPGIITFNALINGYCKEGWVVSAFQLLSVMEKGNCKPN 404
Score = 37.4 bits (85), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 21/85 (24%), Positives = 39/85 (45%), Gaps = 2/85 (2%)
Query: 39 AYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQP 98
C G +E ++ + +SP++ T+ +L+K K A++ + M + G QP
Sbjct: 624 GLCNNGRVEEAETILFSMSSFGVSPNHFTYAVLVKAHVKAGRLDRAFQIVSTMVKNGCQP 683
Query: 99 EEELCSSLI--FHLGKMRAHSEALS 121
+ S+L+ F L + ALS
Sbjct: 684 NSHIYSALLSGFVLSNTAIGARALS 708
>gi|168034142|ref|XP_001769572.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162679114|gb|EDQ65565.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 871
Score = 49.7 bits (117), Expect = 4e-04, Method: Composition-based stats.
Identities = 35/159 (22%), Positives = 70/159 (44%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
MI + + GCFEE L D + + D V N+++ Y + G + + + ++ +
Sbjct: 381 MIDGYGKLGCFEEAIGLYHDMKESGVRPDRVSYNTLIDIYAKLGRFDDALTACKDMERVG 440
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ D T++ LI + K+ Y A M +G P S+LI K H +A
Sbjct: 441 LKADVVTYNALIDAYGKQGKYKDAAGLFDKMKAEGLVPNVLTYSALIDAYSKAGMHQDAT 500
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLKDAYIVVK 159
S++ + + L+ ++ L++DA ++++
Sbjct: 501 SIFVEFKRAGLKPDVVLYSSLIDSCCKCGLVEDAVVLLQ 539
Score = 43.5 bits (101), Expect = 0.027, Method: Composition-based stats.
Identities = 28/127 (22%), Positives = 56/127 (44%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I A C+ G E + K +VV ++M+ Y + G E + + + E
Sbjct: 346 LIDAVCKGGQMELAASIMSSMRLKNISPNVVTYSTMIDGYGKLGCFEEAIGLYHDMKESG 405
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ PD +++ LI + K + A DM R G + + ++LI GK + +A
Sbjct: 406 VRPDRVSYNTLIDIYAKLGRFDDALTACKDMERVGLKADVVTYNALIDAYGKQGKYKDAA 465
Query: 121 SVYNMLR 127
+++ ++
Sbjct: 466 GLFDKMK 472
Score = 43.5 bits (101), Expect = 0.033, Method: Composition-based stats.
Identities = 27/121 (22%), Positives = 58/121 (47%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ R +E+++++ + + + + D+ N+++ A C+ G ME +M +
Sbjct: 311 LIAVCSRGSLWEDSQRVFAEMQRRGIEQDIFTYNTLIDAVCKGGQMELAASIMSSMRLKN 370
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
ISP+ T+ +I + K + A DM G +P+ ++LI K+ +AL
Sbjct: 371 ISPNVVTYSTMIDGYGKLGCFEEAIGLYHDMKESGVRPDRVSYNTLIDIYAKLGRFDDAL 430
Query: 121 S 121
+
Sbjct: 431 T 431
Score = 39.7 bits (91), Expect = 0.38, Method: Composition-based stats.
Identities = 29/102 (28%), Positives = 45/102 (44%), Gaps = 2/102 (1%)
Query: 29 DVVLLNSMLCAYCRTGDM-ESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYMLAYRT 87
D + NS++ A C G + E V ++ I D T++ LI CK LA
Sbjct: 304 DRITFNSLI-AVCSRGSLWEDSQRVFAEMQRRGIEQDIFTYNTLIDAVCKGGQMELAASI 362
Query: 88 MVDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVYNMLRYS 129
M M K P S++I GK+ EA+ +Y+ ++ S
Sbjct: 363 MSSMRLKNISPNVVTYSTMIDGYGKLGCFEEAIGLYHDMKES 404
Score = 38.1 bits (87), Expect = 1.1, Method: Composition-based stats.
Identities = 18/75 (24%), Positives = 44/75 (58%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I A+ ++G ++ + +F+ K DVVL +S++ + C+ G +E + +++++ +
Sbjct: 486 LIDAYSKAGMHQDATSIFVEFKRAGLKPDVVLYSSLIDSCCKCGLVEDAVVLLQEMTQAG 545
Query: 61 ISPDYNTFHILIKYF 75
I P+ T++ LI +
Sbjct: 546 IQPNIVTYNSLIDAY 560
Score = 38.1 bits (87), Expect = 1.3, Method: Composition-based stats.
Identities = 28/128 (21%), Positives = 63/128 (49%), Gaps = 1/128 (0%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTG-DMESVMHVMRKLDEL 59
M+SA+ RSG E ++ + K +++ N+++ A + G D++ + + ++ +
Sbjct: 240 MVSAYGRSGRCREALKVFQAMKKAGCKPNLITYNTIIDACGKGGVDLKKALDIFEEMQKE 299
Query: 60 AISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEA 119
+ PD TF+ LI + ++ + R +M R+G + + ++LI + K A
Sbjct: 300 GVEPDRITFNSLIAVCSRGSLWEDSQRVFAEMQRRGIEQDIFTYNTLIDAVCKGGQMELA 359
Query: 120 LSVYNMLR 127
S+ + +R
Sbjct: 360 ASIMSSMR 367
>gi|147866209|emb|CAN83683.1| hypothetical protein VITISV_017537 [Vitis vinifera]
Length = 833
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 29/122 (23%), Positives = 56/122 (45%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ +C+ G QL E K ++ N ++ CR ++R++ +
Sbjct: 310 LINGYCKEGWVVSAFQLLSVMEKGNCKPNIRTYNELMEGLCRVSKSYKAFLLLRRVVDNG 369
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ PD T++IL+ FCKE +A+ M+ G +P+ ++LI L K+ +A
Sbjct: 370 LLPDRVTYNILVDGFCKEGQLNMAFNIFNSMNSAGLEPDGFTFTALIDGLCKLGRLEQAN 429
Query: 121 SV 122
+
Sbjct: 430 GI 431
Score = 38.5 bits (88), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 18/59 (30%), Positives = 30/59 (50%)
Query: 41 CRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPE 99
CR G +E V RK+ + + P TF+ LI +CKE + A++ + M + +P
Sbjct: 280 CREGKIEEANGVFRKMLKHGLCPGIITFNALINGYCKEGWVVSAFQLLSVMEKGNCKPN 338
Score = 37.4 bits (85), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 21/85 (24%), Positives = 39/85 (45%), Gaps = 2/85 (2%)
Query: 39 AYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQP 98
C G +E ++ + +SP++ T+ +L+K K A++ + M + G QP
Sbjct: 558 GLCNNGRVEEAETILFSMSSFGVSPNHFTYAVLVKAHVKAGRLDRAFQIVSTMVKNGCQP 617
Query: 99 EEELCSSLI--FHLGKMRAHSEALS 121
+ S+L+ F L + ALS
Sbjct: 618 NSHIYSALLSGFVLSNTAIGARALS 642
Score = 35.4 bits (80), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 26/108 (24%), Positives = 46/108 (42%), Gaps = 1/108 (0%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLD-EL 59
+++A C++G + + D + S++ A CR D+ V K+ E
Sbjct: 134 VVNALCKNGFVQAAEMFCCKVLRLGFGLDTHVCTSLVLANCRRDDLGEAFRVFEKMSKEE 193
Query: 60 AISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLI 107
+ P+ T+ ILI C+ A++ +M KG QP + LI
Sbjct: 194 SCRPNSVTYSILIHGLCEAGRLEEAFQLKQEMVEKGCQPSTRTYTVLI 241
>gi|297833514|ref|XP_002884639.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297330479|gb|EFH60898.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 864
Score = 49.7 bits (117), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 23/99 (23%), Positives = 51/99 (51%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ +C+ G +L E + K +V N ++ CR G +H+++++ +
Sbjct: 377 LINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKAVHLLKRMLDNG 436
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPE 99
+SPD ++++LI C+E +AY+ + M+ +P+
Sbjct: 437 LSPDIVSYNVLIDGLCREGHMNVAYKLLTSMNSFDLEPD 475
Score = 43.5 bits (101), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 25/99 (25%), Positives = 46/99 (46%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I A C G ++ L + A+ K +V ++ CR G +E V RK+ +
Sbjct: 307 LIKALCDRGLIDKAFNLFDEMIARGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDG 366
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPE 99
I P T++ LI +CK+ + A+ + M ++ +P
Sbjct: 367 IFPSVITYNALINGYCKDGRVVPAFELLTVMEKRACKPN 405
Score = 40.8 bits (94), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 43/89 (48%), Gaps = 3/89 (3%)
Query: 29 DVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYMLAYRTM 88
D+V N ++ CR G M ++ ++ + PD TF +I FCK+ +A +
Sbjct: 440 DIVSYNVLIDGLCREGHMNVAYKLLTSMNSFDLEPDCLTFTAIINAFCKQGKADVASAFL 499
Query: 89 VDMHRKGHQPEEELCSSLI---FHLGKMR 114
M RKG +E ++LI ++GK R
Sbjct: 500 GLMLRKGISLDEVTGTTLIDGVCNVGKTR 528
>gi|359494794|ref|XP_002267896.2| PREDICTED: pentatricopeptide repeat-containing protein At3g07290,
mitochondrial [Vitis vinifera]
Length = 876
Score = 49.7 bits (117), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 29/122 (23%), Positives = 56/122 (45%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ +C+ G QL E K ++ N ++ CR ++R++ +
Sbjct: 353 LINGYCKEGWVVSAFQLLSVMEKGNCKPNIRTYNELMEGLCRVSKSYKAFLLLRRVVDNG 412
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ PD T++IL+ FCKE +A+ M+ G +P+ ++LI L K+ +A
Sbjct: 413 LLPDRVTYNILVDGFCKEGQLNMAFNIFNSMNSAGLEPDGFTFTALIDGLCKLGRLEQAN 472
Query: 121 SV 122
+
Sbjct: 473 GI 474
Score = 38.1 bits (87), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 18/59 (30%), Positives = 30/59 (50%)
Query: 41 CRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPE 99
CR G +E V RK+ + + P TF+ LI +CKE + A++ + M + +P
Sbjct: 323 CREGKIEEANGVFRKMLKHGLCPGIITFNALINGYCKEGWVVSAFQLLSVMEKGNCKPN 381
Score = 37.4 bits (85), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 21/85 (24%), Positives = 39/85 (45%), Gaps = 2/85 (2%)
Query: 39 AYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQP 98
C G +E ++ + +SP++ T+ +L+K K A++ + M + G QP
Sbjct: 601 GLCNNGRVEEAETILFSMSSFGVSPNHFTYAVLVKAHVKAGRLDRAFQIVSTMVKNGCQP 660
Query: 99 EEELCSSLI--FHLGKMRAHSEALS 121
+ S+L+ F L + ALS
Sbjct: 661 NSHIYSALLSGFVLSNTAIGARALS 685
>gi|255561697|ref|XP_002521858.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223538896|gb|EEF40494.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 533
Score = 49.7 bits (117), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 32/129 (24%), Positives = 56/129 (43%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ CR G +ET ++ + K D V N+++ YC+ G+ + + ++
Sbjct: 59 IINGLCRDGRLKETSEVLVEMSRKGYVPDEVTYNTLVNGYCKEGNFHQALVLHAEMVRNG 118
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+SP+ T+ LI CK A MH +G P E +++I + EA
Sbjct: 119 LSPNVVTYTSLINSMCKAGNLNRAMEFFDQMHVRGLCPNERTYTTIINGFAQQGLLDEAY 178
Query: 121 SVYNMLRYS 129
V N + S
Sbjct: 179 RVLNEMTRS 187
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/120 (25%), Positives = 57/120 (47%), Gaps = 12/120 (10%)
Query: 29 DVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYMLAYRTM 88
+VV N+M+ YC+ + +R + + P+ TF+++I C++ +
Sbjct: 17 NVVTYNTMIDGYCKLKRTDEAFGFLRSMGLKGLEPNLITFNMIINGLCRDGRLKETSEVL 76
Query: 89 VDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVY----------NMLRYSK--RSMCKA 136
V+M RKG+ P+E ++L+ K +AL ++ N++ Y+ SMCKA
Sbjct: 77 VEMSRKGYVPDEVTYNTLVNGYCKEGNFHQALVLHAEMVRNGLSPNVVTYTSLINSMCKA 136
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 37/163 (22%), Positives = 71/163 (43%), Gaps = 8/163 (4%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
MI +C+ +E K + +++ N ++ CR G ++ V+ ++
Sbjct: 24 MIDGYCKLKRTDEAFGFLRSMGLKGLEPNLITFNMIINGLCRDGRLKETSEVLVEMSRKG 83
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
PD T++ L+ +CKE + A +M R G P +SLI + K + A+
Sbjct: 84 YVPDEVTYNTLVNGYCKEGNFHQALVLHAEMVRNGLSPNVVTYTSLINSMCKAGNLNRAM 143
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISG----KLLKDAYIVVK 159
++ + R +C +E+ +I+G LL +AY V+
Sbjct: 144 EFFDQMHV--RGLCP--NERTYTTIINGFAQQGLLDEAYRVLN 182
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 26/116 (22%), Positives = 54/116 (46%), Gaps = 3/116 (2%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+++ +C+ G F + L + +VV S++ + C+ G++ M ++
Sbjct: 94 LVNGYCKEGNFHQALVLHAEMVRNGLSPNVVTYTSLINSMCKAGNLNRAMEFFDQMHVRG 153
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFH---LGKM 113
+ P+ T+ +I F ++ + AYR + +M R G P ++LI LG+M
Sbjct: 154 LCPNERTYTTIINGFAQQGLLDEAYRVLNEMTRSGFIPSIVTYNALINGHCVLGRM 209
Score = 43.5 bits (101), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 27/123 (21%), Positives = 58/123 (47%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ F + G +E ++ + +V N+++ +C G ME + +++ +
Sbjct: 164 IINGFAQQGLLDEAYRVLNEMTRSGFIPSIVTYNALINGHCVLGRMEEAIGLLQDMVGKG 223
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ PD ++ +I F + + A++ V+M K P+ SSLI L + R +EA
Sbjct: 224 VLPDVVSYSTIISGFARNQELDRAFQMKVEMIGKSVLPDAVTYSSLIQGLCEQRRLTEAC 283
Query: 121 SVY 123
++
Sbjct: 284 DMF 286
Score = 37.0 bits (84), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 29/119 (24%), Positives = 50/119 (42%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+IS F R+ + Q+ + K D V +S++ C + + +++ +
Sbjct: 234 IISGFARNQELDRAFQMKVEMIGKSVLPDAVTYSSLIQGLCEQRRLTEACDMFQEMLTIK 293
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEA 119
+ PD T+ LI +CKE A +M +KG P+ + LI L K EA
Sbjct: 294 LPPDEFTYTTLINAYCKEGDLNKALHLHDEMIQKGFLPDAVTYNVLINGLNKQARSKEA 352
>gi|8778411|gb|AAF79419.1|AC025808_1 F18O14.1 [Arabidopsis thaliana]
Length = 689
Score = 49.7 bits (117), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 47/81 (58%), Gaps = 1/81 (1%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYD-KYDVVLLNSMLCAYCRTGDMESVMHVMRKLDEL 59
+++A+CRSG ++ A + E+ + +VV NS++ Y GD+E + V+R + E
Sbjct: 16 VVNAYCRSGNVDKAMVFAKETESSLGLELNVVTYNSLINGYAMIGDVEGMTRVLRLMSER 75
Query: 60 AISPDYNTFHILIKYFCKEKM 80
+S + T+ LIK +CK+ +
Sbjct: 76 GVSRNVVTYTSLIKGYCKKGL 96
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 38/153 (24%), Positives = 79/153 (51%), Gaps = 14/153 (9%)
Query: 1 MISAFCRSGCFEETKQL---AGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLD 57
+I+ +C+SG E +Q+ D+ K D + N+++ YCR G ++ + + ++
Sbjct: 157 LINGYCKSGQLVEAEQIFSRMNDWSLKPDHHT---YNTLVDGYCRAGYVDEALKLCDQMC 213
Query: 58 ELAISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHS 117
+ + P T++IL+K + + + M ++G +E CS+L+ L K+ +
Sbjct: 214 QKEVVPTVMTYNILLKGYSRIGAFHDVLSLWKMMLKRGVNADEISCSTLLEALFKLGDFN 273
Query: 118 EALSVY-NMLRYSKRSMCKALHEKI-LHILISG 148
EA+ ++ N+L R + L + I L+++ISG
Sbjct: 274 EAMKLWENVL---ARGL---LTDTITLNVMISG 300
Score = 44.7 bits (104), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 22/126 (17%), Positives = 62/126 (49%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ +CR+G + ++ + + + + NS++ YC++G + + ++++ +
Sbjct: 122 LMDGYCRTGQIRDAVRVHDNMIEIGVRTNTTICNSLINGYCKSGQLVEAEQIFSRMNDWS 181
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ PD++T++ L+ +C+ A + M +K P + L+ ++ A + L
Sbjct: 182 LKPDHHTYNTLVDGYCRAGYVDEALKLCDQMCQKEVVPTVMTYNILLKGYSRIGAFHDVL 241
Query: 121 SVYNML 126
S++ M+
Sbjct: 242 SLWKMM 247
Score = 40.4 bits (93), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 38/79 (48%)
Query: 29 DVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYMLAYRTM 88
+VV S++ YC+ G ME HV L E + D + + +L+ +C+ A R
Sbjct: 80 NVVTYTSLIKGYCKKGLMEEAEHVFELLKEKKLVADQHMYGVLMDGYCRTGQIRDAVRVH 139
Query: 89 VDMHRKGHQPEEELCSSLI 107
+M G + +C+SLI
Sbjct: 140 DNMIEIGVRTNTTICNSLI 158
Score = 37.0 bits (84), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 22/107 (20%), Positives = 47/107 (43%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I +C+ G EE + + + K D + ++ YCRTG + + V + E+
Sbjct: 87 LIKGYCKKGLMEEAEHVFELLKEKKLVADQHMYGVLMDGYCRTGQIRDAVRVHDNMIEIG 146
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLI 107
+ + + LI +CK + A + M+ +P+ ++L+
Sbjct: 147 VRTNTTICNSLINGYCKSGQLVEAEQIFSRMNDWSLKPDHHTYNTLV 193
>gi|357521609|ref|XP_003631093.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355525115|gb|AET05569.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 788
Score = 49.7 bits (117), Expect = 5e-04, Method: Composition-based stats.
Identities = 37/165 (22%), Positives = 71/165 (43%), Gaps = 12/165 (7%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C+ G + L + D V NS++ C G + V ++ K+
Sbjct: 201 LIDGLCKDGFVSDALGLCSQIGERGILLDAVTYNSLIDGCCSVGRWQEVTQLLTKMVREN 260
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ PD TF+ILI CKE + A + M ++G +P+ ++ + M +
Sbjct: 261 VDPDDYTFNILIDALCKEGRILEAQGVLAMMSKRGEKPD------IVTYNALMEGYCSRE 314
Query: 121 SVYNMLRYSKRSMCKALHEKIL--HILISG----KLLKDAYIVVK 159
+V+ R + + L +L ++LI G K++ +A ++ K
Sbjct: 315 NVHEARELFNRMVKRGLEPDVLNYNVLIDGYCKTKMVDEAMVLFK 359
Score = 44.7 bits (104), Expect = 0.015, Method: Composition-based stats.
Identities = 30/101 (29%), Positives = 49/101 (48%), Gaps = 6/101 (5%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDEL- 59
+I +C++ +E L + K + NS++ C +G + HV + LDE+
Sbjct: 341 LIDGYCKTKMVDEAMVLFKELCNKNLVPTIASYNSLIDGLCNSG---RISHVKKLLDEMH 397
Query: 60 --AISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQP 98
A PD T++ILI CKE + A +V M +KG +P
Sbjct: 398 GSAQPPDVVTYNILIDALCKEGRILEALGVLVMMMKKGVKP 438
Score = 43.1 bits (100), Expect = 0.035, Method: Composition-based stats.
Identities = 33/146 (22%), Positives = 64/146 (43%), Gaps = 1/146 (0%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C G ++L + DV+ N +L A+C+T + + + R++ E
Sbjct: 516 LIDGLCNLGRIPHVQELLDEMCDSGQSPDVITYNILLDAFCKTQPFDKAISLFRQIVE-G 574
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
I PD+ T H ++ CK + +A + + G P + + LI L K + EA+
Sbjct: 575 IWPDFYTNHAIVDNLCKGEKLKMAEDALKHLLMHGCSPNVQTYTILINALCKDGSFGEAM 634
Query: 121 SVYNMLRYSKRSMCKALHEKILHILI 146
+ + + + R E I+ +L+
Sbjct: 635 LLLSKMEDNDRPPDAITFEIIIGVLL 660
Score = 40.0 bits (92), Expect = 0.36, Method: Composition-based stats.
Identities = 26/107 (24%), Positives = 48/107 (44%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I A C+ G E + K K ++V N+M+ YC ++ + ++ +
Sbjct: 411 LIDALCKEGRILEALGVLVMMMKKGVKPNIVTYNAMMDGYCLRNNVNVAKDIFNRMVKSG 470
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLI 107
+ PD +++LI +CK +M A +M K P+ +SLI
Sbjct: 471 LEPDILNYNVLINGYCKTEMVDEAIVLFKEMRHKNLIPDIASYNSLI 517
Score = 39.7 bits (91), Expect = 0.38, Method: Composition-based stats.
Identities = 27/128 (21%), Positives = 55/128 (42%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C SG K+L + DVV N ++ A C+ G + + V+ + +
Sbjct: 376 LIDGLCNSGRISHVKKLLDEMHGSAQPPDVVTYNILIDALCKEGRILEALGVLVMMMKKG 435
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ P+ T++ ++ +C +A M + G +P+ + LI K EA+
Sbjct: 436 VKPNIVTYNAMMDGYCLRNNVNVAKDIFNRMVKSGLEPDILNYNVLINGYCKTEMVDEAI 495
Query: 121 SVYNMLRY 128
++ +R+
Sbjct: 496 VLFKEMRH 503
Score = 38.9 bits (89), Expect = 0.78, Method: Composition-based stats.
Identities = 20/81 (24%), Positives = 41/81 (50%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ +C++ +E L + K D+ NS++ C G + V ++ ++ +
Sbjct: 481 LINGYCKTEMVDEAIVLFKEMRHKNLIPDIASYNSLIDGLCNLGRIPHVQELLDEMCDSG 540
Query: 61 ISPDYNTFHILIKYFCKEKMY 81
SPD T++IL+ FCK + +
Sbjct: 541 QSPDVITYNILLDAFCKTQPF 561
>gi|359479583|ref|XP_002275680.2| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
mitochondrial-like [Vitis vinifera]
gi|297735515|emb|CBI17955.3| unnamed protein product [Vitis vinifera]
Length = 627
Score = 49.7 bits (117), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 42/161 (26%), Positives = 72/161 (44%), Gaps = 12/161 (7%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C +G +E K L + + +VV N ++ A C+ G ME H+++ + +
Sbjct: 279 IIHGMCHTGRWEGAKGLFNEMVDEGVHPNVVTFNVLIDALCKAGKMEEANHLLKLMIQRG 338
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
SPD T++ LI FC E A V M KG + + + LI K EA
Sbjct: 339 ESPDTFTYNTLIDGFCLEGRIDDARDLFVSMESKGIETDAVSYNVLINGYCKSGRMVEAK 398
Query: 121 SVYNMLRYSKRSMCKALHEKIL--HILISGKL----LKDAY 155
+Y + MCK + ++ + L++G ++DA+
Sbjct: 399 KLY------REMMCKEIMPTVITYNTLLTGLFREGKVRDAW 433
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 44/81 (54%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
MI C+SG E K L E K ++V N+++ +C+ +M+ V+ +++++ E
Sbjct: 524 MIHGLCKSGQLENAKDLFLGMEEKGCAPNLVTFNTLMRGFCQNDEMQKVVELLQEMAEKD 583
Query: 61 ISPDYNTFHILIKYFCKEKMY 81
SPD +T I++ K++ Y
Sbjct: 584 FSPDASTISIVVDLLSKDEKY 604
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/107 (24%), Positives = 52/107 (48%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I + C+ G ++ K+L + + + DVV +S++ C TG E + ++ +
Sbjct: 244 IIDSLCKDGLIDKGKELFLEMKGRGISPDVVAYSSIIHGMCHTGRWEGAKGLFNEMVDEG 303
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLI 107
+ P+ TF++LI CK A + M ++G P+ ++LI
Sbjct: 304 VHPNVVTFNVLIDALCKAGKMEEANHLLKLMIQRGESPDTFTYNTLI 350
Score = 40.4 bits (93), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 34/154 (22%), Positives = 66/154 (42%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ +C+SG E K+L + K V+ N++L R G + ++ ++
Sbjct: 384 LINGYCKSGRMVEAKKLYREMMCKEIMPTVITYNTLLTGLFREGKVRDAWNLFGEMKVHD 443
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
++P+ T++IL+ CK A + QP ++ + LI L K R A
Sbjct: 444 LTPESCTYNILLDGLCKNNHLSEAMELFHYLENHDFQPSIQIFNCLIDGLCKARKIEIAR 503
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLKDA 154
++N L + + ++H L L++A
Sbjct: 504 ELFNRLSHEGLEPNVITYTVMIHGLCKSGQLENA 537
Score = 40.0 bits (92), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 24/120 (20%), Positives = 53/120 (44%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C++ E ++L + + +V+ M+ C++G +E+ + ++E
Sbjct: 489 LIDGLCKARKIEIARELFNRLSHEGLEPNVITYTVMIHGLCKSGQLENAKDLFLGMEEKG 548
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+P+ TF+ L++ FC+ + +M K P+ S ++ L K + E L
Sbjct: 549 CAPNLVTFNTLMRGFCQNDEMQKVVELLQEMAEKDFSPDASTISIVVDLLSKDEKYREYL 608
Score = 40.0 bits (92), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 31/126 (24%), Positives = 56/126 (44%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I FC G ++ + L E+K + D V N ++ YC++G M + R++
Sbjct: 349 LIDGFCLEGRIDDARDLFVSMESKGIETDAVSYNVLINGYCKSGRMVEAKKLYREMMCKE 408
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
I P T++ L+ +E A+ +M PE + L+ L K SEA+
Sbjct: 409 IMPTVITYNTLLTGLFREGKVRDAWNLFGEMKVHDLTPESCTYNILLDGLCKNNHLSEAM 468
Query: 121 SVYNML 126
+++ L
Sbjct: 469 ELFHYL 474
Score = 38.5 bits (88), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 18/75 (24%), Positives = 37/75 (49%)
Query: 33 LNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYMLAYRTMVDMH 92
N++L A + V+ + +++ + ++PD+ T +ILI +C + +M
Sbjct: 95 FNTLLGAVAKIKRYFDVISLYKRMSLIGLAPDFITLNILINCYCNLNKVDFGLAVLGEML 154
Query: 93 RKGHQPEEELCSSLI 107
R+GH P +SL+
Sbjct: 155 RRGHSPNTVTFTSLV 169
>gi|297852926|ref|XP_002894344.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297340186|gb|EFH70603.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 650
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 63/127 (49%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+IS+F R G +E + + E K D++ NS++ + GD++ +++ E
Sbjct: 483 LISSFGRVGEVDEAINIFEELERSDCKPDIISYNSLINCLGKNGDVDEAHVRFKEMQEKG 542
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
++PD T+ L++ F K + +AY +M KG QP + L+ L K +EA+
Sbjct: 543 LNPDVVTYSTLMECFGKTERVEMAYSLFEEMLVKGCQPNIVTYNILLDCLEKSGRTAEAV 602
Query: 121 SVYNMLR 127
+Y ++
Sbjct: 603 DLYTKMK 609
>gi|308044321|ref|NP_001183751.1| uncharacterized protein LOC100502344 [Zea mays]
gi|238014378|gb|ACR38224.1| unknown [Zea mays]
Length = 184
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 35/127 (27%), Positives = 61/127 (48%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+++ FC SG E K+L K + NS++ YC +M+S + + +
Sbjct: 16 LMNGFCMSGRVEGGKKLLDWMLEKNIHPNAATYNSLMKQYCIENNMKSTTEIYKGMRSRD 75
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ P+ NT++ILIK CK + A +M +KG + S+LI L K + EA
Sbjct: 76 VGPNENTYNILIKGHCKARNMKEALYFHDEMIQKGFRLTATSYSALIRLLNKKKKFVEAR 135
Query: 121 SVYNMLR 127
+++ +R
Sbjct: 136 ELFHDMR 142
>gi|297830004|ref|XP_002882884.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297328724|gb|EFH59143.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 409
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 28/119 (23%), Positives = 53/119 (44%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C SG E QL +F + + +V+ + ++ +C G E ++ ++++
Sbjct: 208 LIKGLCESGNLEAALQLLDEFPKQKSRPNVMTFSPLIRGFCNKGKFEEAFKLLERMEKER 267
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEA 119
I PD TF+ILI K+ + M KG +P +++ L + + EA
Sbjct: 268 IEPDTITFNILISGLRKKGRVEEGIDLLERMKLKGCEPNPGTYQEVLYGLLDKKRNLEA 326
Score = 41.6 bits (96), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 24/121 (19%), Positives = 57/121 (47%)
Query: 29 DVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYMLAYRTM 88
D LN ++ C +G++E+ + ++ + + P+ TF LI+ FC + + A++ +
Sbjct: 201 DACCLNILIKGLCESGNLEAALQLLDEFPKQKSRPNVMTFSPLIRGFCNKGKFEEAFKLL 260
Query: 89 VDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVYNMLRYSKRSMCKALHEKILHILISG 148
M ++ +P+ + LI L K E + + ++ ++++L+ L+
Sbjct: 261 ERMEKERIEPDTITFNILISGLRKKGRVEEGIDLLERMKLKGCEPNPGTYQEVLYGLLDK 320
Query: 149 K 149
K
Sbjct: 321 K 321
>gi|15231863|ref|NP_190938.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75174107|sp|Q9LFF1.1|PP281_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g53700, chloroplastic; AltName: Full=Protein MATERNAL
EFFECT EMBRYO ARREST 40; Flags: Precursor
gi|6729521|emb|CAB67677.1| putative protein [Arabidopsis thaliana]
gi|15982931|gb|AAL09812.1| AT3g53700/F4P12_400 [Arabidopsis thaliana]
gi|332645608|gb|AEE79129.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 754
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 32/142 (22%), Positives = 62/142 (43%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C+S E+ QL + K D NS+L +CR GD++ +++ +
Sbjct: 511 LIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNG 570
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
PD T+ LI CK +A + + + KG + +I L + R +EA+
Sbjct: 571 CEPDIVTYGTLISGLCKAGRVEVASKLLRSIQMKGINLTPHAYNPVIQGLFRKRKTTEAI 630
Query: 121 SVYNMLRYSKRSMCKALHEKIL 142
+++ + + A+ +I+
Sbjct: 631 NLFREMLEQNEAPPDAVSYRIV 652
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 36/134 (26%), Positives = 60/134 (44%), Gaps = 3/134 (2%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+IS C+ G +E ++ + + V N+++ C+ +E + R L
Sbjct: 336 VISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKG 395
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
I PD TF+ LI+ C + + +A +M KG +P+E + LI L EAL
Sbjct: 396 ILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEAL 455
Query: 121 SVYNMLRYSKRSMC 134
NML+ + S C
Sbjct: 456 ---NMLKQMELSGC 466
Score = 43.1 bits (100), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 31/128 (24%), Positives = 60/128 (46%), Gaps = 2/128 (1%)
Query: 1 MISAFCRSGCFEETKQLAGD-FEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDEL 59
+++ C++G + ++ + YD DV NS++ C+ G+++ + V+ ++
Sbjct: 301 LVNGLCKAGHVKHAIEIMDVMLQEGYDP-DVYTYNSVISGLCKLGEVKEAVEVLDQMITR 359
Query: 60 AISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEA 119
SP+ T++ LI CKE A + KG P+ +SLI L R H A
Sbjct: 360 DCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVA 419
Query: 120 LSVYNMLR 127
+ ++ +R
Sbjct: 420 MELFEEMR 427
Score = 38.9 bits (89), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 24/100 (24%), Positives = 51/100 (51%), Gaps = 1/100 (1%)
Query: 28 YDVVLLNSMLCAYCRTGDMESVMHVMRKL-DELAISPDYNTFHILIKYFCKEKMYMLAYR 86
+ V +N ++ +C+ G +E ++ ++++ ++ PD TF+ L+ CK A
Sbjct: 257 WSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIE 316
Query: 87 TMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVYNML 126
M M ++G+ P+ +S+I L K+ EA+ V + +
Sbjct: 317 IMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQM 356
Score = 38.5 bits (88), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 22/110 (20%), Positives = 48/110 (43%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I + C G +E + E V+ N+++ +C+ + +++
Sbjct: 441 LIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHG 500
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHL 110
+S + T++ LI CK + A + M M +G +P++ +SL+ H
Sbjct: 501 VSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTHF 550
Score = 37.7 bits (86), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 33/154 (21%), Positives = 60/154 (38%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+IS C+ EE +LA +K DV NS++ C T + M + ++
Sbjct: 371 LISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKG 430
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
PD T+++LI C + A + M G ++LI K EA
Sbjct: 431 CEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKTREAE 490
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLKDA 154
+++ + S + ++ L + ++DA
Sbjct: 491 EIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDA 524
Score = 36.6 bits (83), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 27/128 (21%), Positives = 56/128 (43%), Gaps = 3/128 (2%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I FC++ E +++ + E + V N+++ C++ +E +M ++
Sbjct: 476 LIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEG 535
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHL---GKMRAHS 117
PD T++ L+ +FC+ A + M G +P+ +LI L G++ S
Sbjct: 536 QKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVAS 595
Query: 118 EALSVYNM 125
+ L M
Sbjct: 596 KLLRSIQM 603
>gi|356540375|ref|XP_003538665.1| PREDICTED: pentatricopeptide repeat-containing protein At3g18110,
chloroplastic-like [Glycine max]
Length = 1476
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 34/122 (27%), Positives = 57/122 (46%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
MIS + R + ++L + E+K D V NS+L A+ R G+ E V + ++ +
Sbjct: 362 MISVYGRCARARKAEELFKELESKGFFPDAVTYNSLLYAFSREGNTEKVRDICEEMVKRG 421
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
D T++ +I + K+ + A + DM G P+ + LI LGK EA
Sbjct: 422 FGQDEMTYNTIIHMYGKQGRHDQAMQIYRDMKSSGRNPDAVTYTVLIDSLGKASKVEEAA 481
Query: 121 SV 122
+V
Sbjct: 482 NV 483
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/110 (24%), Positives = 56/110 (50%)
Query: 29 DVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYMLAYRTM 88
D+ + NS+L Y D +S+ + +K+ + ++ PD T++ LI +C+++ + M
Sbjct: 948 DLQICNSILKLYLGIEDFKSMGIIYQKIQDASLKPDEETYNTLIIMYCRDRRPEEGFSLM 1007
Query: 89 VDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVYNMLRYSKRSMCKALH 138
M G +P+ + SLI K R + +A ++ LR + + +A +
Sbjct: 1008 NKMRSLGLEPKLDTYRSLITAFNKQRMYEQAEELFEELRSNGYKLDRAFY 1057
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 31/132 (23%), Positives = 59/132 (44%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+ISA R EE + D E+ + D+ N+M+ Y R + ++L+
Sbjct: 327 LISACSRESNLEEAVAVFSDMESHRCQPDLWTYNAMISVYGRCARARKAEELFKELESKG 386
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
PD T++ L+ F +E +M ++G +E +++I GK H +A+
Sbjct: 387 FFPDAVTYNSLLYAFSREGNTEKVRDICEEMVKRGFGQDEMTYNTIIHMYGKQGRHDQAM 446
Query: 121 SVYNMLRYSKRS 132
+Y ++ S R+
Sbjct: 447 QIYRDMKSSGRN 458
Score = 43.1 bits (100), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 31/129 (24%), Positives = 54/129 (41%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ AF R G E+ + + + + D + N+++ Y + G + M + R +
Sbjct: 397 LLYAFSREGNTEKVRDICEEMVKRGFGQDEMTYNTIIHMYGKQGRHDQAMQIYRDMKSSG 456
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+PD T+ +LI K A M +M G +P S+LI K EA
Sbjct: 457 RNPDAVTYTVLIDSLGKASKVEEAANVMSEMLDAGVKPTLHTYSALICAYAKAGKREEAE 516
Query: 121 SVYNMLRYS 129
+N +R S
Sbjct: 517 ETFNCMRRS 525
Score = 37.7 bits (86), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 27/114 (23%), Positives = 52/114 (45%), Gaps = 2/114 (1%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMES--VMHVMRKLDE 58
M+ + R+G F + K+L + D+V N+++ A ++G ME + ++ ++
Sbjct: 255 MMGVYARNGRFSKVKELLDLMRERGCVPDLVSFNTLINARMKSGAMEPNLALQLLNEVRR 314
Query: 59 LAISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGK 112
I PD T++ LI +E A DM QP+ +++I G+
Sbjct: 315 SGIRPDIITYNTLISACSRESNLEEAVAVFSDMESHRCQPDLWTYNAMISVYGR 368
>gi|224111362|ref|XP_002315826.1| predicted protein [Populus trichocarpa]
gi|222864866|gb|EEF01997.1| predicted protein [Populus trichocarpa]
Length = 636
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 29/107 (27%), Positives = 53/107 (49%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I + + G +E+ L + + + DV+ N+++ ++C+ M R++ +
Sbjct: 173 LIDGYGKIGLLDESVCLFEEMKFMGCEPDVITYNALINSFCKFKGMLRAFEFFREMKDKD 232
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLI 107
+ P+ ++ LI CKE M +A + VDM R G P E SSLI
Sbjct: 233 LKPNVISYSTLIDALCKEGMMQMAIKFFVDMTRVGLLPNEFTYSSLI 279
Score = 42.4 bits (98), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 29/129 (22%), Positives = 60/129 (46%), Gaps = 6/129 (4%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C++ C + K+L + + K D + +M+ + G+ + +++ K+ E+
Sbjct: 488 LIDGLCKNNCIGDAKKLFDEMQDKNMIPDKIAYTAMIDGNLKHGNFQEALNMRNKMMEMG 547
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLI---FHLGKMRAHS 117
I D + L+ + A + + +M KG P+E LC+ L+ + LG +
Sbjct: 548 IELDLYAYTSLVWGLSQCGQVQQARKFLAEMIGKGIIPDETLCTRLLRKHYELGNI---D 604
Query: 118 EALSVYNML 126
EA+ + N L
Sbjct: 605 EAIELQNEL 613
Score = 38.1 bits (87), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 26/107 (24%), Positives = 48/107 (44%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
MI C+ G + L + D+V N+++ Y + G ++ + + ++ +
Sbjct: 138 MIGHVCKEGDMLTARSLFEQMKKMGLTPDIVTYNTLIDGYGKIGLLDESVCLFEEMKFMG 197
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLI 107
PD T++ LI FCK K + A+ +M K +P S+LI
Sbjct: 198 CEPDVITYNALINSFCKFKGMLRAFEFFREMKDKDLKPNVISYSTLI 244
>gi|58260196|ref|XP_567508.1| hypothetical protein [Cryptococcus neoformans var. neoformans
JEC21]
gi|134116536|ref|XP_772940.1| hypothetical protein CNBJ2160 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50255560|gb|EAL18293.1| hypothetical protein CNBJ2160 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|57229558|gb|AAW45991.1| conserved hypothetical protein [Cryptococcus neoformans var.
neoformans JEC21]
Length = 760
Score = 49.3 bits (116), Expect = 5e-04, Method: Composition-based stats.
Identities = 25/84 (29%), Positives = 45/84 (53%)
Query: 29 DVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYMLAYRTM 88
+++ +N++L Y R ++E++ + K EL + PD T+ L++ + + LA M
Sbjct: 525 NLITINTVLRHYAREANIEAMSALFSKAGELKLQPDVVTYTTLVQGLLRARRLDLAKGAM 584
Query: 89 VDMHRKGHQPEEELCSSLIFHLGK 112
M ++G P E +CS LI L K
Sbjct: 585 DAMQKQGIVPNERMCSMLIADLAK 608
>gi|224056220|ref|XP_002298762.1| predicted protein [Populus trichocarpa]
gi|222846020|gb|EEE83567.1| predicted protein [Populus trichocarpa]
Length = 643
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 25/101 (24%), Positives = 52/101 (51%)
Query: 7 RSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYN 66
RS FE ++++ + AK K D + N+++ AYCR G M+ + ++ E + PD
Sbjct: 501 RSENFERSEEVLKEILAKGIKPDTISYNTVIFAYCRNGRMKEASRIFSEMRESGLVPDVI 560
Query: 67 TFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLI 107
T++ + + + M+ A + M + G +P + +S++
Sbjct: 561 TYNTFVASYAADSMFEDAIDVVRYMIKHGCKPNQNTYNSVV 601
Score = 44.3 bits (103), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 30/154 (19%), Positives = 66/154 (42%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++S F R+G E ++ + A K ++ N+++ + G +M V ++
Sbjct: 215 LLSGFVRAGKDESAMRVFAEMRAAGCKPNICTFNALIKMHGNRGKFAEMMKVFEEIKNSC 274
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
PD T++ L+ F + M +M R G PE + ++LI + + +A+
Sbjct: 275 CVPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERDTYNTLISAYSRCGSFDQAM 334
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLKDA 154
+Y + + + + + +L L G L + +
Sbjct: 335 DIYKRMLEAGITPDLSTYNAVLAALARGGLWEQS 368
Score = 43.1 bits (100), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 30/119 (25%), Positives = 59/119 (49%), Gaps = 13/119 (10%)
Query: 8 SGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNT 67
SG F+E K+ AG F + D Y N+++ AY R G + M + +++ E I+PD +T
Sbjct: 299 SGVFKEMKR-AG-FVPERDTY-----NTLISAYSRCGSFDQAMDIYKRMLEAGITPDLST 351
Query: 68 FHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIF------HLGKMRAHSEAL 120
++ ++ + ++ + + +M +P E SL+ +G+M A +E +
Sbjct: 352 YNAVLAALARGGLWEQSEKIFAEMKDGRCKPNELTYCSLLHAYANGKEIGRMLALAEEI 410
Score = 37.7 bits (86), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 25/100 (25%), Positives = 46/100 (46%)
Query: 30 VVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYMLAYRTMV 89
+V NS++ AY R G ++ M + ++ E I+ D T+ L+ F + A R
Sbjct: 174 IVTYNSLISAYARDGLLKEAMELKNQMVEGGINLDVFTYTTLLSGFVRAGKDESAMRVFA 233
Query: 90 DMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVYNMLRYS 129
+M G +P ++LI G +E + V+ ++ S
Sbjct: 234 EMRAAGCKPNICTFNALIKMHGNRGKFAEMMKVFEEIKNS 273
Score = 37.4 bits (85), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 18/77 (23%), Positives = 39/77 (50%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I A+CR+G +E ++ + DV+ N+ + +Y E + V+R + +
Sbjct: 530 VIFAYCRNGRMKEASRIFSEMRESGLVPDVITYNTFVASYAADSMFEDAIDVVRYMIKHG 589
Query: 61 ISPDYNTFHILIKYFCK 77
P+ NT++ ++ +CK
Sbjct: 590 CKPNQNTYNSVVDGYCK 606
>gi|326513138|dbj|BAK06809.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 637
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 48/99 (48%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
MIS++ R G ++ L D A K DV+ NS++ + GD++ + +++ E
Sbjct: 469 MISSYGRVGLVDKASGLFEDMNASSCKPDVITYNSLINCLGKNGDLDEAHMLFKEMQEKG 528
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPE 99
PD T+ ILI+ F K +A +DM +G P
Sbjct: 529 YGPDVFTYSILIECFGKSNKVDMACNLFLDMIAEGCIPN 567
>gi|218195055|gb|EEC77482.1| hypothetical protein OsI_16315 [Oryza sativa Indica Group]
Length = 455
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 35/150 (23%), Positives = 75/150 (50%), Gaps = 8/150 (5%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I A + G +ET +L + + + D+VL N+++ ++ +G+++ +M ++++
Sbjct: 255 LIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKR 314
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
I+PD T++ L++ C A + + +M ++G QP+ ++LI +S
Sbjct: 315 IAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTKRGIQPDLVTYNTLI------SGYSMKG 368
Query: 121 SVYNMLRYSKRSMCKALHEKIL--HILISG 148
V + LR M K + +L + LI G
Sbjct: 369 DVKDALRIRNEMMNKGFNPTLLTYNALIQG 398
Score = 42.0 bits (97), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 24/110 (21%), Positives = 50/110 (45%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ C G +E ++L + + + D+V N+++ Y GD++ + + ++
Sbjct: 325 LMRGLCLLGRVDEARKLIDEMTKRGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKG 384
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHL 110
+P T++ LI+ CK A + +M G P++ SLI L
Sbjct: 385 FNPTLLTYNALIQGLCKNGQGDDAENMVKEMVENGITPDDSTYISLIEGL 434
Score = 38.9 bits (89), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 21/83 (25%), Positives = 45/83 (54%), Gaps = 2/83 (2%)
Query: 27 KYDVVLLNSMLCAYCRTGDMESVMHVMRKLDEL-AISPDYNTFHILIKYFCKEKMYMLAY 85
+ + V N+++ +C G +++ + +MR++ E I+P+ T+ +I +CK A
Sbjct: 69 RPNAVTYNTVIAGFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAV 128
Query: 86 RTMVDMHRKGH-QPEEELCSSLI 107
+ +M KG +PE + ++LI
Sbjct: 129 KVFDEMLTKGEVKPEAVMYNALI 151
>gi|297605515|ref|NP_001057291.2| Os06g0249500 [Oryza sativa Japonica Group]
gi|255676892|dbj|BAF19205.2| Os06g0249500 [Oryza sativa Japonica Group]
Length = 690
Score = 49.3 bits (116), Expect = 5e-04, Method: Composition-based stats.
Identities = 23/94 (24%), Positives = 45/94 (47%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++S C++G F +L G + V+ +++ YC+ G ++ + ++R +DE
Sbjct: 429 LLSGSCKAGDFAAVDELLGKMIDDGCQPSVITFGTLVHGYCKVGKIDEALRILRSMDESG 488
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRK 94
I P+ ++ LI + CK LA +M K
Sbjct: 489 IHPNNVIYNTLIDFLCKRGDVDLAIELFDEMKEK 522
Score = 49.3 bits (116), Expect = 5e-04, Method: Composition-based stats.
Identities = 31/127 (24%), Positives = 57/127 (44%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ FCR E +L + + + DV N++L C+ GD +V ++ K+ +
Sbjct: 394 LIAGFCRKKRLHEAYELLQEMKEVGIRPDVCTYNTLLSGSCKAGDFAAVDELLGKMIDDG 453
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
P TF L+ +CK A R + M G P + ++LI L K A+
Sbjct: 454 CQPSVITFGTLVHGYCKVGKIDEALRILRSMDESGIHPNNVIYNTLIDFLCKRGDVDLAI 513
Query: 121 SVYNMLR 127
+++ ++
Sbjct: 514 ELFDEMK 520
Score = 45.1 bits (105), Expect = 0.010, Method: Composition-based stats.
Identities = 28/122 (22%), Positives = 52/122 (42%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
MIS ++G E+ +A + K D N ++ +CR + +++++ E+
Sbjct: 359 MISGLTQAGRLEDACSMASSMKEAGFKLDTKAYNILIAGFCRKKRLHEAYELLQEMKEVG 418
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
I PD T++ L+ CK + + M G QP +L+ K+ EAL
Sbjct: 419 IRPDVCTYNTLLSGSCKAGDFAAVDELLGKMIDDGCQPSVITFGTLVHGYCKVGKIDEAL 478
Query: 121 SV 122
+
Sbjct: 479 RI 480
Score = 37.0 bits (84), Expect = 2.8, Method: Composition-based stats.
Identities = 17/71 (23%), Positives = 33/71 (46%)
Query: 29 DVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYMLAYRTM 88
D ++ +M+ + G +E + + E D ++ILI FC++K AY +
Sbjct: 352 DAIMYFTMISGLTQAGRLEDACSMASSMKEAGFKLDTKAYNILIAGFCRKKRLHEAYELL 411
Query: 89 VDMHRKGHQPE 99
+M G +P+
Sbjct: 412 QEMKEVGIRPD 422
>gi|12583808|gb|AAG59660.1|AC084319_18 putative membrane-associated salt-inducible protein [Oryza sativa
Japonica Group]
Length = 772
Score = 49.3 bits (116), Expect = 5e-04, Method: Composition-based stats.
Identities = 29/110 (26%), Positives = 54/110 (49%), Gaps = 6/110 (5%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYC---RTGDMESVMHVMRKLD 57
+++A C GC +E L + D+V N++L C R GD+E +M M ++D
Sbjct: 187 VLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKRWGDVEELMDEMVRVD 246
Query: 58 ELAISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLI 107
+P+ TF+ LI Y C+ ++ + + M G P+ + +++I
Sbjct: 247 ---CAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATII 293
Score = 45.8 bits (107), Expect = 0.006, Method: Composition-based stats.
Identities = 32/126 (25%), Positives = 55/126 (43%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ FC+ G +E L + K + V +L C G +M ++ +
Sbjct: 397 VINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQG 456
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
P+ TF+ LI + CK+ + A + M G P+ S++I LGK EAL
Sbjct: 457 CPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEAL 516
Query: 121 SVYNML 126
+ N++
Sbjct: 517 ELLNVM 522
Score = 37.4 bits (85), Expect = 1.8, Method: Composition-based stats.
Identities = 21/112 (18%), Positives = 52/112 (46%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ FC++G + +L + DV+ +++ +C+ G ++ + +++ +
Sbjct: 362 LVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCG 421
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGK 112
P+ ++ I++K C ++ A M M ++G P ++LI L K
Sbjct: 422 CKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCK 473
Score = 37.0 bits (84), Expect = 2.4, Method: Composition-based stats.
Identities = 16/94 (17%), Positives = 42/94 (44%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I CR+G FE ++ D+ + +++ C+ G +E ++ ++
Sbjct: 257 LIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMPSYG 316
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRK 94
+ P+ ++ ++K C + + A + +M +K
Sbjct: 317 LKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQK 350
Score = 37.0 bits (84), Expect = 2.6, Method: Composition-based stats.
Identities = 22/98 (22%), Positives = 46/98 (46%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ C + ++E ++L + K D V N ++ +C+ G ++ V+ ++ ++
Sbjct: 327 VLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHG 386
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQP 98
PD T+ +I FCKE + A + M G +P
Sbjct: 387 CMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKP 424
Score = 37.0 bits (84), Expect = 2.9, Method: Composition-based stats.
Identities = 28/110 (25%), Positives = 49/110 (44%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ A CRSG F + ++ AK D N +L A C G ++ + ++RKL
Sbjct: 152 ILEAACRSGGFRNSVRVLEAMHAKGCTLDTGNCNLVLNAICEQGCVDEAVGLLRKLAFFG 211
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHL 110
D +++ ++K C K + M +M R P ++LI +L
Sbjct: 212 CEADIVSYNAVLKGLCMAKRWGDVEELMDEMVRVDCAPNIVTFNTLIGYL 261
>gi|413916119|gb|AFW56051.1| hypothetical protein ZEAMMB73_517553 [Zea mays]
Length = 663
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 46/100 (46%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I A C G E ++ D + V ++ AYCR G++ S RK+ E
Sbjct: 553 LIHAHCERGFLREARKFFNDMISDGLPPSAVTYTVIIHAYCRRGNLYSAYGWFRKMLEEG 612
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEE 100
+ P+ T+++LI C+ LAYR +M +G P +
Sbjct: 613 VEPNEITYNVLIHALCRMGRTQLAYRHFYEMLERGLVPNK 652
Score = 40.8 bits (94), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 37/73 (50%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+++ +C++G +E L GD V+ N ++ YCR GD+E + ++ E
Sbjct: 378 LLNGYCKAGNQKEALLLFGDLRRAGLAPTVLTYNILIDGYCRLGDLEEARRLKEEMVEQG 437
Query: 61 ISPDYNTFHILIK 73
PD T+ IL+K
Sbjct: 438 CLPDVYTYTILMK 450
Score = 40.4 bits (93), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 45/99 (45%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
MI +SG E + + A DV+ NS+L YC+ G+ + + + L
Sbjct: 343 MIHGLLQSGQIEAAQAKFVEMRAMGLLPDVITYNSLLNGYCKAGNQKEALLLFGDLRRAG 402
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPE 99
++P T++ILI +C+ A R +M +G P+
Sbjct: 403 LAPTVLTYNILIDGYCRLGDLEEARRLKEEMVEQGCLPD 441
>gi|356540343|ref|XP_003538649.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22670,
mitochondrial-like [Glycine max]
Length = 543
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 29/122 (23%), Positives = 55/122 (45%)
Query: 33 LNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYMLAYRTMVDMH 92
N ++ +CR ++ M + EL PD ++ I+ +C E+ + + + +M
Sbjct: 266 FNVLMHGWCRARKFDNARKAMEDMKELGFEPDVFSYTSFIEAYCHERDFRKVDQVLEEMR 325
Query: 93 RKGHQPEEELCSSLIFHLGKMRAHSEALSVYNMLRYSKRSMCKALHEKILHILISGKLLK 152
G P ++++ HLGK S+AL VY ++ ++ ++ IL LK
Sbjct: 326 ENGCPPNAVTYTTVMLHLGKAGQLSKALEVYEKMKCDGCVADTPVYSCMIFILGKAGRLK 385
Query: 153 DA 154
DA
Sbjct: 386 DA 387
>gi|224130702|ref|XP_002328355.1| predicted protein [Populus trichocarpa]
gi|222838070|gb|EEE76435.1| predicted protein [Populus trichocarpa]
Length = 608
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 22/99 (22%), Positives = 50/99 (50%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ C G +E +L + + + +V+ N+++ C+TG+ + V +K+++
Sbjct: 164 LINGLCNEGKIKEAVELFNEMVRRGHEPNVISYNTIINGLCKTGNTSMAVDVFKKMEQNG 223
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPE 99
PD T++ +I CK+++ A + +M +G P
Sbjct: 224 CKPDVVTYNTIIDSLCKDRLVNDAMEFLSEMLDRGIPPN 262
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/130 (26%), Positives = 63/130 (48%), Gaps = 6/130 (4%)
Query: 28 YDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYMLAYRT 87
++V LN ++ CR ++ + ++ K+ +L I P +TF+ LI C E A
Sbjct: 121 HNVYSLNVLINCLCRLNHVDFAVSILGKMFKLGIHPTASTFNALINGLCNEGKIKEAVEL 180
Query: 88 MVDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVYNMLRYSKRSMCKA---LHEKILHI 144
+M R+GH+P +++I L K S A+ V+ + +++ CK + I+
Sbjct: 181 FNEMVRRGHEPNVISYNTIINGLCKTGNTSMAVDVFKKM---EQNGCKPDVVTYNTIIDS 237
Query: 145 LISGKLLKDA 154
L +L+ DA
Sbjct: 238 LCKDRLVNDA 247
Score = 43.1 bits (100), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 28/127 (22%), Positives = 62/127 (48%), Gaps = 8/127 (6%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ C+ G E + + K + ++ N+++ YC ++ +M+ +K+ E+
Sbjct: 304 LVDGLCKEGMVSEARLVFETMTEKGVEPNISTYNALMDGYC----LQRLMNEAKKVFEIM 359
Query: 61 I----SPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAH 116
I +P ++++ILI FCK + A + +M+ K P+ S+L+ L +
Sbjct: 360 IRQGCAPGVHSYNILINGFCKSRRMDEAKSLLAEMYHKALNPDTVTYSTLMQGLCQFGRP 419
Query: 117 SEALSVY 123
EAL+++
Sbjct: 420 KEALNIF 426
Score = 37.4 bits (85), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 31/148 (20%), Positives = 61/148 (41%), Gaps = 4/148 (2%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I + C+ + + + + +V N M+ +C G + + +++
Sbjct: 234 IIDSLCKDRLVNDAMEFLSEMLDRGIPPNVFTYNCMVHGFCILGQLNEATRLFKEMVGRD 293
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ PD T IL+ CKE M A M KG +P ++L+ R +EA
Sbjct: 294 VMPDTVTLTILVDGLCKEGMVSEARLVFETMTEKGVEPNISTYNALMDGYCLQRLMNEAK 353
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISG 148
V+ ++ ++ +H +ILI+G
Sbjct: 354 KVFEIM--IRQGCAPGVHS--YNILING 377
>gi|297723047|ref|NP_001173887.1| Os04g0351333 [Oryza sativa Japonica Group]
gi|255675359|dbj|BAH92615.1| Os04g0351333 [Oryza sativa Japonica Group]
Length = 740
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 30/119 (25%), Positives = 52/119 (43%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ C+ G E K + + +VV NS++ YC G+ME ++ + +
Sbjct: 372 IINNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMASIG 431
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEA 119
I P+ + L+ +CK A DM KG +P L S ++ L + R + A
Sbjct: 432 IEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYSIILHGLFQARRTTAA 490
Score = 45.1 bits (105), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 21/107 (19%), Positives = 47/107 (43%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ CR+ C +E L A K+D++ N ++ A + G + + +
Sbjct: 512 VLGGLCRNNCTDEANMLLEKLFAMNVKFDIITFNIVISAMFKVGRRQEAKELFDAISTYG 571
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLI 107
+ P+ T+ ++I KE+ Y A + + + GH + L + ++
Sbjct: 572 LVPNIQTYSMMITNLIKEESYEEADNLFISVEKSGHASDSRLLNHIV 618
Score = 41.2 bits (95), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 23/94 (24%), Positives = 47/94 (50%)
Query: 30 VVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYMLAYRTMV 89
+++ NS++ C+ +M+ +++K+ + I+PD T+ ++I CK K A R +
Sbjct: 83 ILICNSIIKELCKMKEMDKAESIVQKMVDSGIAPDLFTYSLIIDGLCKSKAMDKAERVLE 142
Query: 90 DMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVY 123
M G +P +SLI +E++ V+
Sbjct: 143 QMVEAGTRPNSITYNSLIHGYSISGMWNESVRVF 176
Score = 37.4 bits (85), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 31/125 (24%), Positives = 55/125 (44%), Gaps = 2/125 (1%)
Query: 2 ISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGD--MESVMHVMRKLDEL 59
I A + G E K + K K D++ ++ML Y D + V ++ +
Sbjct: 195 IHALFKHGRTNEAKCIFDSMVLKGPKPDIISYSTMLHGYATATDSCLADVHNIFNLMLTK 254
Query: 60 AISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEA 119
I+P+ + F+ILI + + M A DM KG P+ +++I L ++ +A
Sbjct: 255 GIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCRIGRLDDA 314
Query: 120 LSVYN 124
L +N
Sbjct: 315 LHKFN 319
>gi|449444228|ref|XP_004139877.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g62910-like [Cucumis sativus]
gi|449492643|ref|XP_004159059.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g62910-like [Cucumis sativus]
Length = 585
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 74/162 (45%), Gaps = 3/162 (1%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C+ G ++E K+L + + + DVV ++++ C+ G + + +
Sbjct: 243 IIDELCKIGKWKEAKRLFNEMVDQGVRPDVVTFSALIDTLCKEGMVIEAKKFLETMMLRG 302
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
I PD TF LI+ FC A + M KG++P+ + LI+ K EA+
Sbjct: 303 IVPDLFTFTSLIEGFCLVGDLDSAKELFLSMPSKGYEPDVISYTVLIYGYCKTFNVEEAM 362
Query: 121 SVYN-MLRYSKRSMCKALHEKILHILISGKL--LKDAYIVVK 159
+YN MLR K K + + ++GK+ K + VVK
Sbjct: 363 KLYNEMLRVGKWPDMKTFCVLLKGLFLAGKVGDAKKLFGVVK 404
Score = 45.8 bits (107), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/98 (24%), Positives = 42/98 (42%)
Query: 2 ISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAI 61
+ C++GC E +L + ++ K D+ N ++ C+ +E+ + KL + +
Sbjct: 419 LDGLCKNGCLFEAMELFNELKSYNMKLDIESFNCLIDGLCKARKLETAWELFEKLSQEGL 478
Query: 62 SPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPE 99
PD T+ I+I FCK A M G P
Sbjct: 479 QPDVVTYCIMINGFCKNGQVDNANILFQMMEENGCTPN 516
Score = 37.7 bits (86), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 26/113 (23%), Positives = 47/113 (41%), Gaps = 6/113 (5%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKY------DVVLLNSMLCAYCRTGDMESVMHVMR 54
+I CR+G +L + Y ++ N ++ C+ G + +
Sbjct: 202 LIKGLCRTGNINLALKLHQEMLNGTSPYAINCKPNIFSYNIIIDELCKIGKWKEAKRLFN 261
Query: 55 KLDELAISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLI 107
++ + + PD TF LI CKE M + A + + M +G P+ +SLI
Sbjct: 262 EMVDQGVRPDVVTFSALIDTLCKEGMVIEAKKFLETMMLRGIVPDLFTFTSLI 314
>gi|222628664|gb|EEE60796.1| hypothetical protein OsJ_14385 [Oryza sativa Japonica Group]
Length = 808
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 30/119 (25%), Positives = 52/119 (43%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ C+ G E K + + +VV NS++ YC G+ME ++ + +
Sbjct: 458 IINNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMASIG 517
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEA 119
I P+ + L+ +CK A DM KG +P L S ++ L + R + A
Sbjct: 518 IEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYSIILHGLFQARRTTAA 576
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 21/107 (19%), Positives = 47/107 (43%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ CR+ C +E L A K+D++ N ++ A + G + + +
Sbjct: 598 VLGGLCRNNCTDEANMLLEKLFAMNVKFDIITFNIVISAMFKVGRRQEAKELFDAISTYG 657
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLI 107
+ P+ T+ ++I KE+ Y A + + + GH + L + ++
Sbjct: 658 LVPNIQTYSMMITNLIKEESYEEADNLFISVEKSGHASDSRLLNHIV 704
Score = 41.2 bits (95), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 23/94 (24%), Positives = 47/94 (50%)
Query: 30 VVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYMLAYRTMV 89
+++ NS++ C+ +M+ +++K+ + I+PD T+ ++I CK K A R +
Sbjct: 169 ILICNSIIKELCKMKEMDKAESIVQKMVDSGIAPDLFTYSLIIDGLCKSKAMDKAERVLE 228
Query: 90 DMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVY 123
M G +P +SLI +E++ V+
Sbjct: 229 QMVEAGTRPNSITYNSLIHGYSISGMWNESVRVF 262
Score = 37.0 bits (84), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 31/125 (24%), Positives = 55/125 (44%), Gaps = 2/125 (1%)
Query: 2 ISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGD--MESVMHVMRKLDEL 59
I A + G E K + K K D++ ++ML Y D + V ++ +
Sbjct: 281 IHALFKHGRTNEAKCIFDSMVLKGPKPDIISYSTMLHGYATATDSCLADVHNIFNLMLTK 340
Query: 60 AISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEA 119
I+P+ + F+ILI + + M A DM KG P+ +++I L ++ +A
Sbjct: 341 GIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCRIGRLDDA 400
Query: 120 LSVYN 124
L +N
Sbjct: 401 LHKFN 405
>gi|357443403|ref|XP_003591979.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355481027|gb|AES62230.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 873
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 47/92 (51%), Gaps = 5/92 (5%)
Query: 9 GCFEETK-----QLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISP 63
GCFE +L + +A+ K + V N M+ +C G ++ +VM K+ E SP
Sbjct: 360 GCFEHRGSDAAFKLVEEMKARGVKENGVTHNIMIKWFCTEGKIDEASNVMVKMVESGFSP 419
Query: 64 DYNTFHILIKYFCKEKMYMLAYRTMVDMHRKG 95
D T++ +I +CK AY+ M +M RKG
Sbjct: 420 DCFTYNTMINGYCKAGKMAEAYKMMDEMGRKG 451
Score = 45.4 bits (106), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 30/119 (25%), Positives = 50/119 (42%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I +C G E+ Q K D+ N +L CR G +E + +
Sbjct: 567 IIHGYCWEGAVEKAFQFHNKMVEHSLKPDIFTCNILLRGLCREGMLEKGLTLFNTWISKG 626
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEA 119
D T++I+I FCKE+ A+ M +M K +P+ ++++ L K EA
Sbjct: 627 KPMDTVTYNIIISSFCKERRLEDAFDLMTEMEGKNLEPDRYTYNAIVTGLTKAGRTEEA 685
Score = 40.4 bits (93), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 29/127 (22%), Positives = 50/127 (39%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
MI FC G +E + D N+M+ YC+ G M +M ++
Sbjct: 392 MIKWFCTEGKIDEASNVMVKMVESGFSPDCFTYNTMINGYCKAGKMAEAYKMMDEMGRKG 451
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ D T + L+ C EK AY + ++G+ +E +LI K AL
Sbjct: 452 LKLDTFTLNTLLHTMCLEKQLDDAYTLTMKARKRGYILDEVTYGTLIMGYFKDEQADRAL 511
Query: 121 SVYNMLR 127
++ ++
Sbjct: 512 KLWEEMK 518
Score = 39.7 bits (91), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 25/99 (25%), Positives = 44/99 (44%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I +C EE +L D V N++L A C+ + V ++ ++
Sbjct: 217 LIHGYCSDNNTEEALRLINQMGEYGCCPDNVTYNTVLTALCKRSQLTQVRDLLLQMKNSG 276
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPE 99
+ P+ NT++IL+ +CK K A + M KG P+
Sbjct: 277 LFPNRNTYNILVHGYCKLKWLKEAAEVIELMTGKGMLPD 315
Score = 38.5 bits (88), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 20/97 (20%), Positives = 42/97 (43%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ CR G E+ L + +K D V N ++ ++C+ +E +M +++
Sbjct: 602 LLRGLCREGMLEKGLTLFNTWISKGKPMDTVTYNIIISSFCKERRLEDAFDLMTEMEGKN 661
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQ 97
+ PD T++ ++ K A + + KG Q
Sbjct: 662 LEPDRYTYNAIVTGLTKAGRTEEAEKLALKFAEKGQQ 698
Score = 37.4 bits (85), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 34/158 (21%), Positives = 64/158 (40%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
M+ C G +E +L E+ DVV N+++ ++ ++ ++
Sbjct: 322 MVRGLCDEGKIDEAVRLRDKMESFKLVPDVVTYNTLIDGCFEHRGSDAAFKLVEEMKARG 381
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ + T +I+IK+FC E A MV M G P+ +++I K +EA
Sbjct: 382 VKENGVTHNIMIKWFCTEGKIDEASNVMVKMVESGFSPDCFTYNTMINGYCKAGKMAEAY 441
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLKDAYIVV 158
+ + + + +LH + K L DAY +
Sbjct: 442 KMMDEMGRKGLKLDTFTLNTLLHTMCLEKQLDDAYTLT 479
Score = 36.6 bits (83), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 25/126 (19%), Positives = 57/126 (45%)
Query: 30 VVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYMLAYRTMV 89
++ N+++ C +G + + + +L E + PD +T +I+I +C E A++
Sbjct: 526 IITYNTIIRGLCLSGKTDQAVDKLNELLEKGLVPDESTSNIIIHGYCWEGAVEKAFQFHN 585
Query: 90 DMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVYNMLRYSKRSMCKALHEKILHILISGK 149
M +P+ C+ L+ L + + L+++N + M + I+ +
Sbjct: 586 KMVEHSLKPDIFTCNILLRGLCREGMLEKGLTLFNTWISKGKPMDTVTYNIIISSFCKER 645
Query: 150 LLKDAY 155
L+DA+
Sbjct: 646 RLEDAF 651
Score = 35.4 bits (80), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 35/140 (25%), Positives = 66/140 (47%), Gaps = 11/140 (7%)
Query: 27 KYDVVLLNSMLCAYCRTGDMESVM---HVMRKLDELAISPDYNTFHILIKYFCKEKMYML 83
+ +++ N++L A R+ S++ V + +L + P+ NTF+ILI +C +
Sbjct: 170 RPNLLTCNTLLNALVRSNSSHSLVFSREVFQDAVKLGVQPNVNTFNILIHGYCSDNNTEE 229
Query: 84 AYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVYNMLRYSKRSMCKALHEKILH 143
A R + M G P+ ++++ L K S+ V ++L K S + +
Sbjct: 230 ALRLINQMGEYGCCPDNVTYNTVLTALCK---RSQLTQVRDLLLQMKNSGLFP-NRNTYN 285
Query: 144 ILISG----KLLKDAYIVVK 159
IL+ G K LK+A V++
Sbjct: 286 ILVHGYCKLKWLKEAAEVIE 305
>gi|302760809|ref|XP_002963827.1| hypothetical protein SELMODRAFT_79421 [Selaginella moellendorffii]
gi|300169095|gb|EFJ35698.1| hypothetical protein SELMODRAFT_79421 [Selaginella moellendorffii]
Length = 616
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/119 (22%), Positives = 58/119 (48%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ C+SG EE +L + + + VV+ +S++ YCR G++ ++ ++ +
Sbjct: 347 LVDGLCKSGEIEEAHKLVKEMSVRGCRTGVVMYSSLVSGYCRAGNVHKAREILAEMVSIN 406
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEA 119
+ P T++I++ K+ A + D+ +G+ P+ ++LI L K EA
Sbjct: 407 MVPPLFTYNIVLGGLIKDGSISKAVSLISDLVARGYVPDVVTYNTLIDGLCKANRVREA 465
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 46/99 (46%), Gaps = 3/99 (3%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++S C+ G EE ++ + DV+ NS++ A C G V+ L ++
Sbjct: 210 LVSGICKDGDVEEALEILDGMKLAGPVPDVITYNSIIHALCVAG---KVVEAAEILKTMS 266
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPE 99
SPD TF+ L+ FCK M A + +M R+ P+
Sbjct: 267 CSPDLVTFNTLLDGFCKAGMLPRALEVLEEMCRENILPD 305
Score = 44.7 bits (104), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 29/119 (24%), Positives = 57/119 (47%), Gaps = 3/119 (2%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I A C +G E ++ + D+V N++L +C+ G + + V+ ++
Sbjct: 245 IIHALCVAGKVVEAAEI---LKTMSCSPDLVTFNTLLDGFCKAGMLPRALEVLEEMCREN 301
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEA 119
I PD T+ IL+ C+ +A+ + ++ R+G+ P+ +SL+ L K EA
Sbjct: 302 ILPDVITYTILVNGLCRVGQVQVAFYLLEEIVRQGYIPDVIAYTSLVDGLCKSGEIEEA 360
Score = 44.3 bits (103), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 34/125 (27%), Positives = 57/125 (45%), Gaps = 5/125 (4%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKY--DVVLLNSMLCAYCRTGDMESVMHVMRKLDE 58
+IS C+SG E+ ++L + K K D+V N+++ A+ R + K+
Sbjct: 138 VISGLCKSGNLEKARELLEEMIRKGGKSAPDIVTYNTLINAFYRASRIREACAFREKMKA 197
Query: 59 LAISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHL---GKMRA 115
I+PD T +IL+ CK+ A + M G P+ +S+I L GK+
Sbjct: 198 AGINPDVLTCNILVSGICKDGDVEEALEILDGMKLAGPVPDVITYNSIIHALCVAGKVVE 257
Query: 116 HSEAL 120
+E L
Sbjct: 258 AAEIL 262
Score = 37.0 bits (84), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 27/127 (21%), Positives = 52/127 (40%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ + G + L D A+ DVV N+++ C+ + + ++
Sbjct: 417 VLGGLIKDGSISKAVSLISDLVARGYVPDVVTYNTLIDGLCKANRVREACDLADEMASRG 476
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
P+ T ++ C+ A+ +V+M RK H P + +SLI L K +A
Sbjct: 477 CFPNDVTLGSVVFGLCRVGRVDDAWSLVVEMSRKRHAPNVVVYTSLIDGLCKSDRMDDAC 536
Query: 121 SVYNMLR 127
V + +R
Sbjct: 537 MVLDAMR 543
>gi|302783901|ref|XP_002973723.1| hypothetical protein SELMODRAFT_99426 [Selaginella moellendorffii]
gi|300158761|gb|EFJ25383.1| hypothetical protein SELMODRAFT_99426 [Selaginella moellendorffii]
Length = 581
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 31/121 (25%), Positives = 56/121 (46%), Gaps = 2/121 (1%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLD--E 58
++S CR G E KQ ++ DVV N +L A + G + + + +D +
Sbjct: 121 ILSGLCRMGKVSEAKQFFDSMPSRGYSPDVVAYNGLLDALYKEGKVAEAWGLFKTMDMAD 180
Query: 59 LAISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSE 118
++PD T++ LI FC+ + A + D+ KG+ P+ +S++ L + E
Sbjct: 181 RKVAPDLITYNTLIDGFCRVEKTDEAMKLFKDVIAKGYMPDTVTYNSILLGLARKSNMDE 240
Query: 119 A 119
A
Sbjct: 241 A 241
Score = 48.9 bits (115), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 29/124 (23%), Positives = 59/124 (47%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+IS C++G E ++ + K DV ++ CR G ++ + K+ E
Sbjct: 16 IISGLCKTGKVTEALEMVEEMTEKGVNPDVATYTIIVDRLCRAGKVDEADELFHKMIERG 75
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
S + ++ LI CK++ AY+ + +M KG++P+ ++++ L +M SEA
Sbjct: 76 CSANTVAYNALINGLCKDENIERAYKLLEEMASKGYEPDNITYNTILSGLCRMGKVSEAK 135
Query: 121 SVYN 124
++
Sbjct: 136 QFFD 139
Score = 42.4 bits (98), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 30/119 (25%), Positives = 53/119 (44%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I FCR +E +L D AK D V NS+L R +M+ + +K+ +
Sbjct: 193 LIDGFCRVEKTDEAMKLFKDVIAKGYMPDTVTYNSILLGLARKSNMDEAEEMFKKMVDSG 252
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEA 119
+P+ T+ I++ C+ +M K P+ LC+++I L K + +A
Sbjct: 253 CAPNGATYSIVLSGHCRVGNMARCLELYEEMTEKRFSPDVLLCNAVIDMLCKAKKVDDA 311
Score = 39.3 bits (90), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 23/99 (23%), Positives = 45/99 (45%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++S CR G +L + K DV+L N+++ C+ ++ V+ ++ ++
Sbjct: 263 VLSGHCRVGNMARCLELYEEMTEKRFSPDVLLCNAVIDMLCKAKKVDDAHKVLEEMSKIG 322
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPE 99
PD T++IL+ CK + A+ M G P+
Sbjct: 323 AVPDVVTYNILLDGLCKTNLVDKAHELFSTMVDNGCAPD 361
Score = 36.6 bits (83), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 24/137 (17%), Positives = 58/137 (42%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ CR+G +E +L + + V N+++ C+ ++E ++ ++
Sbjct: 51 IVDRLCRAGKVDEADELFHKMIERGCSANTVAYNALINGLCKDENIERAYKLLEEMASKG 110
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
PD T++ ++ C+ A + M +G+ P+ + L+ L K +EA
Sbjct: 111 YEPDNITYNTILSGLCRMGKVSEAKQFFDSMPSRGYSPDVVAYNGLLDALYKEGKVAEAW 170
Query: 121 SVYNMLRYSKRSMCKAL 137
++ + + R + L
Sbjct: 171 GLFKTMDMADRKVAPDL 187
>gi|224145304|ref|XP_002336216.1| predicted protein [Populus trichocarpa]
gi|222832672|gb|EEE71149.1| predicted protein [Populus trichocarpa]
Length = 616
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 32/124 (25%), Positives = 54/124 (43%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ C+ G F + +L D A+ + DV +++ C+ G+ + + RK+ E
Sbjct: 198 LINGLCKVGKFGQAVELFDDMVARGYQPDVHTYTTIINGLCKIGETVAAAGLFRKMGEAG 257
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
PD T+ +I CK++ A M KG P +SLI L EA
Sbjct: 258 CQPDVVTYSTIIDSLCKDRRVNEALDIFSYMKAKGISPNIFTYNSLIQGLCNFSRWREAS 317
Query: 121 SVYN 124
++ N
Sbjct: 318 AMLN 321
Score = 43.5 bits (101), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 35/154 (22%), Positives = 67/154 (43%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ +C++ E KQL + + D+V N+++ C+ G + + + +
Sbjct: 408 LINGYCKAKRIGEAKQLFNEMIHQGLTPDIVSYNTLIDGLCQLGRLREAHDLFKNMLTNG 467
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
PD T+ IL+ FCK+ A+R M +P + + LI + K R EA
Sbjct: 468 NLPDLCTYSILLDGFCKQGYLAKAFRLFRAMQSTYLKPNMVMYNILIDAMCKSRNLKEAR 527
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLKDA 154
+++ L ++ I++ L LL +A
Sbjct: 528 KLFSELFVQGLQPNVQIYTTIINGLCKEGLLDEA 561
Score = 42.0 bits (97), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 26/123 (21%), Positives = 53/123 (43%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C+ G E L + + D+ + +L +C+ G + + R +
Sbjct: 443 LIDGLCQLGRLREAHDLFKNMLTNGNLPDLCTYSILLDGFCKQGYLAKAFRLFRAMQSTY 502
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ P+ ++ILI CK + A + ++ +G QP ++ +++I L K EAL
Sbjct: 503 LKPNMVMYNILIDAMCKSRNLKEARKLFSELFVQGLQPNVQIYTTIINGLCKEGLLDEAL 562
Query: 121 SVY 123
+
Sbjct: 563 EAF 565
Score = 41.2 bits (95), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 25/127 (19%), Positives = 57/127 (44%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ FC+ G + +L ++ Y K ++V+ N ++ A C++ +++ + +L
Sbjct: 478 LLDGFCKQGYLAKAFRLFRAMQSTYLKPNMVMYNILIDAMCKSRNLKEARKLFSELFVQG 537
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ P+ + +I CKE + A +M G P E + +I + + S A+
Sbjct: 538 LQPNVQIYTTIINGLCKEGLLDEALEAFRNMEEDGCPPNEFSYNVIIRGFLQHKDESRAV 597
Query: 121 SVYNMLR 127
+ +R
Sbjct: 598 QLIGEMR 604
Score = 40.0 bits (92), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 23/98 (23%), Positives = 44/98 (44%)
Query: 30 VVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYMLAYRTMV 89
+V N+++ C+ G + + + PD +T+ +I CK + A
Sbjct: 192 IVTFNTLINGLCKVGKFGQAVELFDDMVARGYQPDVHTYTTIINGLCKIGETVAAAGLFR 251
Query: 90 DMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVYNMLR 127
M G QP+ S++I L K R +EAL +++ ++
Sbjct: 252 KMGEAGCQPDVVTYSTIIDSLCKDRRVNEALDIFSYMK 289
Score = 37.7 bits (86), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 26/107 (24%), Positives = 44/107 (41%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I + C+ E + +AK ++ NS++ C ++ ++ L
Sbjct: 268 IIDSLCKDRRVNEALDIFSYMKAKGISPNIFTYNSLIQGLCNFSRWREASAMLNEMMSLN 327
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLI 107
I P+ TF +LI FCKE A + M G +P SSL+
Sbjct: 328 IMPNIVTFSLLINIFCKEGNVFEARGVLKTMTEMGVEPNVVTYSSLM 374
>gi|116309556|emb|CAH66618.1| OSIGBa0144C23.4 [Oryza sativa Indica Group]
Length = 845
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 30/119 (25%), Positives = 52/119 (43%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ C+ G E K + + +VV NS++ YC G+ME ++ + +
Sbjct: 535 IINNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMASIG 594
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEA 119
I P+ + L+ +CK A DM KG +P L S ++ L + R + A
Sbjct: 595 IEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYSIILHGLFQARRTTAA 653
Score = 45.1 bits (105), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 21/107 (19%), Positives = 47/107 (43%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ CR+ C +E L A K+D++ N ++ A + G + + +
Sbjct: 675 VLGGLCRNNCTDEANMLLEKLFAMNVKFDIITFNIVISAMFKVGRRQEAKELFDAISTYG 734
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLI 107
+ P+ T+ ++I KE+ Y A + + + GH + L + ++
Sbjct: 735 LVPNIQTYSMMITNLIKEESYEEADNLFISVEKSGHASDSRLLNHIV 781
Score = 41.2 bits (95), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 23/97 (23%), Positives = 48/97 (49%)
Query: 30 VVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYMLAYRTMV 89
+++ NS++ C+ +M+ +++K+ + I+PD T+ ++I CK K A R +
Sbjct: 245 ILICNSIIKELCKMKEMDKAESIVQKMVDSGIAPDLFTYSLIIDGLCKSKAMDKAERVLE 304
Query: 90 DMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVYNML 126
M G +P +SLI +E++ V+ +
Sbjct: 305 QMVEAGTRPNSITYNSLIHGYSISGMWNESVRVFKQM 341
>gi|294945390|ref|XP_002784656.1| pentatricopeptide repeat-containing protein, putative [Perkinsus
marinus ATCC 50983]
gi|239897841|gb|EER16452.1| pentatricopeptide repeat-containing protein, putative [Perkinsus
marinus ATCC 50983]
Length = 692
Score = 49.3 bits (116), Expect = 5e-04, Method: Composition-based stats.
Identities = 30/106 (28%), Positives = 52/106 (49%), Gaps = 7/106 (6%)
Query: 29 DVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYMLAYRTM 88
+ V N+++ A R+G ME V + R++DE I PD T+ ++K +C A+ +
Sbjct: 394 NTVSFNTIMDACARSGSMERVSDIFREMDEQGIEPDIITYSTVVKGYCLAGDVDTAFSVL 453
Query: 89 VDMH-------RKGHQPEEELCSSLIFHLGKMRAHSEALSVYNMLR 127
DM RK P+E + +SL+ K +AL + + +R
Sbjct: 454 RDMSGVSRRGGRKKFAPDEIMYNSLLDGCAKQHRVDQALQLLDEMR 499
Score = 39.7 bits (91), Expect = 0.41, Method: Composition-based stats.
Identities = 33/141 (23%), Positives = 60/141 (42%), Gaps = 9/141 (6%)
Query: 11 FEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHI 70
FEE K AG + DVV N+++ + + G+M MR++ E P+ T++
Sbjct: 133 FEEMKD-AG-------RLDVVSFNTVMKGHLKQGNMRQARKTMREMQEAGFPPNVITYNE 184
Query: 71 LIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVYNMLRYSK 130
L+ + K + + +M G P + CS L+ L S+ + ++ +
Sbjct: 185 LLHSMVQGKDKRGIWEVVEEMKANGLPPNKVTCSILLKALTSHSHSSDVVRTMELVERMR 244
Query: 131 RSMCKALHEKILHILIS-GKL 150
M + L ++ I GKL
Sbjct: 245 GEMDEVLFSSVIEACIRIGKL 265
Score = 39.3 bits (90), Expect = 0.60, Method: Composition-based stats.
Identities = 27/129 (20%), Positives = 59/129 (45%), Gaps = 7/129 (5%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ A RSG E + + + + + D++ ++++ YC GD+++ V+R + ++
Sbjct: 401 IMDACARSGSMERVSDIFREMDEQGIEPDIITYSTVVKGYCLAGDVDTAFSVLRDMSGVS 460
Query: 61 -------ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKM 113
+PD ++ L+ K+ A + + +M G P S L+ LG+
Sbjct: 461 RRGGRKKFAPDEIMYNSLLDGCAKQHRVDQALQLLDEMRANGVAPSNYTLSILVKLLGRA 520
Query: 114 RAHSEALSV 122
R EA ++
Sbjct: 521 RRLLEAFNM 529
>gi|326513918|dbj|BAJ92109.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 459
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 31/154 (20%), Positives = 65/154 (42%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ R+G EE K A + DV NS+ A C GD+E + ++
Sbjct: 258 LVDGLVRAGRLEEAKAFALRITKEGVLPDVATFNSLAQALCDAGDVEFAVGLLADASSRG 317
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ PD +T+ +++ K A+R GH+P L ++++ L K ++A
Sbjct: 318 MCPDISTYKVMLPAVAKAGRIEEAFRLFYAAIEDGHRPFPSLYAAIVKALCKAGRFADAF 377
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLKDA 154
+ + ++ + ++ ++ + + G DA
Sbjct: 378 AFFGDMKSKGHPPNRPVYVMLVKMCVRGGRFLDA 411
Score = 40.4 bits (93), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 17/66 (25%), Positives = 31/66 (46%)
Query: 34 NSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHR 93
N++L A C G+ ++R++ ++PD TF L+ +C A + DM
Sbjct: 186 NALLDALCANGNFAGAYKLLRRMARKGVAPDRATFSTLVDAWCASGKLREAQAFLDDMAT 245
Query: 94 KGHQPE 99
+G +P
Sbjct: 246 RGFRPP 251
>gi|224113511|ref|XP_002316516.1| predicted protein [Populus trichocarpa]
gi|222865556|gb|EEF02687.1| predicted protein [Populus trichocarpa]
Length = 761
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 33/125 (26%), Positives = 59/125 (47%), Gaps = 6/125 (4%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ C+ GC + L D AK DV N+++ YC+ ME+ + ++ K+
Sbjct: 432 VINGLCKMGCVSDANNLMNDAIAKGYVPDVFTFNTLIDGYCKQLKMETTIQILNKMWSHG 491
Query: 61 ISPDYNTFHILIKYF---CKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHS 117
++PD T++ ++ K + M + TMV+ KG P + + L L K +
Sbjct: 492 VTPDVITYNSVLNGLSKAVKNEDLMETFETMVE---KGCVPNKITYNILTESLCKAGKVN 548
Query: 118 EALSV 122
EAL +
Sbjct: 549 EALDL 553
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/123 (26%), Positives = 52/123 (42%)
Query: 2 ISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAI 61
I CR G + + DVV N+++C C+ ++ + KL +
Sbjct: 258 IQGLCRKGMLSGAMSMLDSVIREGLTPDVVTYNTLICGLCKNSNVVEAEKYLHKLVNGGL 317
Query: 62 SPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEALS 121
PD T++ LI +CK M A + + KG P+E SLI L + AL+
Sbjct: 318 EPDGFTYNTLIDGYCKMGMLQNAEKILQGAICKGFVPDEFTYCSLINGLCQNDEIDRALA 377
Query: 122 VYN 124
++N
Sbjct: 378 LFN 380
Score = 39.3 bits (90), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 31/127 (24%), Positives = 55/127 (43%), Gaps = 19/127 (14%)
Query: 29 DVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYMLAYRTM 88
DV N +L C+ G+++ ++ K+ + + + TF+I I+ C++ M A +
Sbjct: 215 DVSTFNKLLHTLCKKGEVQESERLLNKVLKKGMCSNLFTFNIFIQGLCRKGMLSGAMSML 274
Query: 89 VDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVYNMLRYSKRSMCKALHEKILHILISG 148
+ R+G P+ ++LI L K EA EK LH L++G
Sbjct: 275 DSVIREGLTPDVVTYNTLICGLCKNSNVVEA-------------------EKYLHKLVNG 315
Query: 149 KLLKDAY 155
L D +
Sbjct: 316 GLEPDGF 322
Score = 38.1 bits (87), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 26/107 (24%), Positives = 48/107 (44%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ C++ + L K K V+L N ++ C+ G + + +M ++ E
Sbjct: 362 LINGLCQNDEIDRALALFNAALGKGLKPTVILYNMLIKGLCQEGLILQALQMMNEMSENG 421
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLI 107
S D T++++I CK A M D KG+ P+ ++LI
Sbjct: 422 CSSDIWTYNLVINGLCKMGCVSDANNLMNDAIAKGYVPDVFTFNTLI 468
Score = 36.2 bits (82), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 29/148 (19%), Positives = 57/148 (38%), Gaps = 12/148 (8%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C+ G + Q+ + D+ N ++ C+ G + ++M
Sbjct: 397 LIKGLCQEGLILQALQMMNEMSENGCSSDIWTYNLVINGLCKMGCVSDANNLMNDAIAKG 456
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
PD TF+ LI +CK+ + + M G P+ +S++ L K + + +
Sbjct: 457 YVPDVFTFNTLIDGYCKQLKMETTIQILNKMWSHGVTPDVITYNSVLNGLSKAVKNEDLM 516
Query: 121 SVY----------NMLRYS--KRSMCKA 136
+ N + Y+ S+CKA
Sbjct: 517 ETFETMVEKGCVPNKITYNILTESLCKA 544
Score = 35.4 bits (80), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 22/107 (20%), Positives = 48/107 (44%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ C+ G +E+++L K ++ N + CR G + M ++ +
Sbjct: 222 LLHTLCKKGEVQESERLLNKVLKKGMCSNLFTFNIFIQGLCRKGMLSGAMSMLDSVIREG 281
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLI 107
++PD T++ LI CK + A + + + G +P+ ++LI
Sbjct: 282 LTPDVVTYNTLICGLCKNSNVVEAEKYLHKLVNGGLEPDGFTYNTLI 328
>gi|297737176|emb|CBI26377.3| unnamed protein product [Vitis vinifera]
Length = 572
Score = 49.3 bits (116), Expect = 5e-04, Method: Composition-based stats.
Identities = 29/99 (29%), Positives = 45/99 (45%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ CR G +E + + E + DV NS++ R G + V + + +
Sbjct: 187 LMDGLCRFGRLKEALEFFKEMEGRGISADVYTYNSLIHGLSRAGLWKEVTWFLNLMVDRG 246
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPE 99
SPD TF ILI CKE A + + MH KG +P+
Sbjct: 247 FSPDAFTFTILIDGLCKEGKVGEAQQILELMHHKGKEPD 285
Score = 48.5 bits (114), Expect = 9e-04, Method: Composition-based stats.
Identities = 26/107 (24%), Positives = 51/107 (47%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C+ G E +Q+ K + D++ N+++ C G +E + L +
Sbjct: 257 LIDGLCKEGKVGEAQQILELMHHKGKEPDILTYNTLMNGLCLVGQLEDATKLFESLADRG 316
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLI 107
I + +++ILI +CK++ A+R +M KG +P ++LI
Sbjct: 317 IKLNVFSYNILINGYCKDQKIDEAFRLFEEMRPKGLKPSTVTYNTLI 363
Score = 47.0 bits (110), Expect = 0.002, Method: Composition-based stats.
Identities = 29/127 (22%), Positives = 56/127 (44%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ C++G EE L + K ++ + + +L CR G +E ++ +
Sbjct: 397 LLDGLCKNGHLEEAIDLFQSIKKTEHKPNIEVFSILLDGMCRAGKLEEAWKQFDEISKNG 456
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ PD ++ILI C + M A + + M KG P+ + +I +L K EA+
Sbjct: 457 LEPDTIAYNILINGLCNKGMLSEAVKLLWQMEEKGCLPDSITFNVIIQNLLKENEIHEAI 516
Query: 121 SVYNMLR 127
+ +R
Sbjct: 517 QLLEEMR 523
>gi|297816088|ref|XP_002875927.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297321765|gb|EFH52186.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 657
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 32/126 (25%), Positives = 57/126 (45%), Gaps = 5/126 (3%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+IS+ C G +E +QLA FE Y N+++ C+ D + + +M ++ E
Sbjct: 221 VISSMCEVGMVKEGRQLAERFEPVVSVY-----NALINGLCKERDYKGGVELMSEMVEKG 275
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
ISP+ ++ LI LA+ + M ++G P SSL+ +AL
Sbjct: 276 ISPNVISYSTLINELSNSGQIELAFSLLAQMLKRGCHPNIHTLSSLVKGCFVRGTTFDAL 335
Query: 121 SVYNML 126
++N +
Sbjct: 336 DMWNQM 341
>gi|255539805|ref|XP_002510967.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223550082|gb|EEF51569.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 774
Score = 49.3 bits (116), Expect = 5e-04, Method: Composition-based stats.
Identities = 33/127 (25%), Positives = 59/127 (46%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I AF R G +E +L D + D + N ++ A+C+ G E + + ++
Sbjct: 526 LIHAFLRGGAIQEALKLVNDMLFRGCPLDEITYNGLIKAFCKLGATEKALGLFDEMVRKD 585
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ P + ++LI C+ A + DM +G P+ +SLI L KM EA
Sbjct: 586 LVPSNISCNLLINGLCRVGKVCNALELLRDMIHRGLAPDVVTYNSLINGLCKMGNIREAF 645
Query: 121 SVYNMLR 127
+++N L+
Sbjct: 646 NLFNKLQ 652
Score = 47.8 bits (112), Expect = 0.002, Method: Composition-based stats.
Identities = 29/158 (18%), Positives = 69/158 (43%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C+ G + D A +++ ++L +C+ +E +V+ ++
Sbjct: 386 LIHGLCKKGLMGSAVDMVNDMSANGCTPNLITYTTLLDGFCKKNQLEEAGYVLNEMSAKG 445
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ +++L++ CK A + +M KG +P+ ++LIF L K+ +AL
Sbjct: 446 FELNIMGYNVLLRALCKNGKVPKALDMLGEMSDKGCKPDIFTFNTLIFGLCKVDRKEDAL 505
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLKDAYIVV 158
++Y + + ++H + G +++A +V
Sbjct: 506 ALYRDMLLDGVIANTVTYNTLIHAFLRGGAIQEALKLV 543
Score = 45.1 bits (105), Expect = 0.009, Method: Composition-based stats.
Identities = 31/116 (26%), Positives = 52/116 (44%), Gaps = 4/116 (3%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ CR G +L D + DVV NS++ C+ G++ ++ KL
Sbjct: 596 LINGLCRVGKVCNALELLRDMIHRGLAPDVVTYNSLINGLCKMGNIREAFNLFNKLQAEG 655
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEE----LCSSLIFHLGK 112
I PD T++ LI + C+ M+ AY ++ P + L S+ I +GK
Sbjct: 656 IQPDAITYNTLICWHCRAGMFDDAYLLLLRGVENAFIPNDVTWYILVSNFIKEIGK 711
Score = 40.0 bits (92), Expect = 0.29, Method: Composition-based stats.
Identities = 26/107 (24%), Positives = 49/107 (45%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I AFC+ G E+ L + K + N ++ CR G + + + ++R +
Sbjct: 561 LIKAFCKLGATEKALGLFDEMVRKDLVPSNISCNLLINGLCRVGKVCNALELLRDMIHRG 620
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLI 107
++PD T++ LI CK A+ + +G QP+ ++LI
Sbjct: 621 LAPDVVTYNSLINGLCKMGNIREAFNLFNKLQAEGIQPDAITYNTLI 667
>gi|255586501|ref|XP_002533891.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223526155|gb|EEF28491.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 701
Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 28/123 (22%), Positives = 59/123 (47%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
M+ C+ G +E + + + K D + N ++ + R +E ++ R+++
Sbjct: 437 MVDGLCKEGRMDEAISIVNQMDKRGYKLDPHVCNPLINGFVRASKLEDAINFFREMECKG 496
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
SP +++ LIK CK + + AY + +M K +P+ CS L+ L + + AL
Sbjct: 497 CSPTIVSYNTLIKGLCKAERFSEAYSFVKEMLEKEWKPDMITCSLLMDGLCQEKKIEMAL 556
Query: 121 SVY 123
+++
Sbjct: 557 NLW 559
Score = 37.4 bits (85), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 25/128 (19%), Positives = 61/128 (47%), Gaps = 5/128 (3%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
MI+ C+ G F+E+ ++ + D+ +S++ C G+++ + V +++ E +
Sbjct: 263 MINGLCKCGRFDESLEIWERMTKNEREKDMFTYSSLIHGLCEAGNIDGAVRVYKEIVESS 322
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQP--EEELCSSLIFHLGKMRAHSE 118
+ D T + ++ FC+ ++ + M ++ Q + +F GK+ E
Sbjct: 323 LVVDAVTHNAMLNGFCRAGKIKESFELWMVMGKENCQTVVSYNILIKGLFENGKVE---E 379
Query: 119 ALSVYNML 126
A+S++ +L
Sbjct: 380 AISIWELL 387
Score = 37.4 bits (85), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 30/134 (22%), Positives = 58/134 (43%), Gaps = 3/134 (2%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ F R+ E+ + E K +V N+++ C+ ++++ E
Sbjct: 472 LINGFVRASKLEDAINFFREMECKGCSPTIVSYNTLIKGLCKAERFSEAYSFVKEMLEKE 531
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
PD T +L+ C+EK +A KG +P+ + + L+ L + +AL
Sbjct: 532 WKPDMITCSLLMDGLCQEKKIEMALNLWQQALDKGFKPDITMYNILMHGLCSVCKLEDAL 591
Query: 121 SVYNMLRYSKRSMC 134
+Y+ + KRS C
Sbjct: 592 QLYSHM---KRSTC 602
>gi|356574297|ref|XP_003555285.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g02860-like [Glycine max]
Length = 794
Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 26/100 (26%), Positives = 51/100 (51%), Gaps = 7/100 (7%)
Query: 8 SGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNT 67
SG FEE K+ F + D + N+++ AY R G + M +++ E +SPD +T
Sbjct: 445 SGVFEEMKR--SRFAPERDTF-----NTLISAYGRCGSFDQAMAAYKRMLEAGVSPDLST 497
Query: 68 FHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLI 107
++ ++ + ++ + + + +M G +P E SSL+
Sbjct: 498 YNAVLATLARGGLWEQSEKVLAEMKDGGCKPNEVTYSSLL 537
Score = 44.3 bits (103), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 27/117 (23%), Positives = 58/117 (49%)
Query: 5 FCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPD 64
+ R+ F +++Q+ + K + DV+ N ++ AYCR M+ ++ ++ A PD
Sbjct: 645 YSRTENFHKSEQIFREILDKGIEPDVISYNIVIYAYCRNDMMDEAKRIIEEMKVPAPVPD 704
Query: 65 YNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEALS 121
T++ I + + M++ A + M ++G +P +S++ K++ EA S
Sbjct: 705 VVTYNTFIAAYAADSMFVEAIDVIRYMIKQGCKPNHNTYNSIVDWYCKLKLRDEACS 761
Score = 44.3 bits (103), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 20/80 (25%), Positives = 43/80 (53%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I A+CR+ +E K++ + + DVV N+ + AY + V+R + +
Sbjct: 676 VIYAYCRNDMMDEAKRIIEEMKVPAPVPDVVTYNTFIAAYAADSMFVEAIDVIRYMIKQG 735
Query: 61 ISPDYNTFHILIKYFCKEKM 80
P++NT++ ++ ++CK K+
Sbjct: 736 CKPNHNTYNSIVDWYCKLKL 755
Score = 42.7 bits (99), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 31/130 (23%), Positives = 58/130 (44%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ + +S +E ++ E+ + VV NS++ AY R G +E + + RK+ +
Sbjct: 291 LLDVYGKSRRPKEAMEVLKQMESNSFRPSVVTYNSLVSAYVRGGLLEDALVLKRKMVDKG 350
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
I PD T+ L+ F LA +M + G +P ++LI G E +
Sbjct: 351 IKPDVYTYTTLLSGFVNAGKEELAMEVFEEMRKVGCKPNICTFNALIKMYGDRGKFEEMV 410
Query: 121 SVYNMLRYSK 130
V+ ++ K
Sbjct: 411 KVFKEIKVCK 420
Score = 42.7 bits (99), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 33/161 (20%), Positives = 69/161 (42%), Gaps = 14/161 (8%)
Query: 1 MISAFCRSG-------CFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVM 53
++S F +G FEE +++ K ++ N+++ Y G E ++ V
Sbjct: 361 LLSGFVNAGKEELAMEVFEEMRKVGC-------KPNICTFNALIKMYGDRGKFEEMVKVF 413
Query: 54 RKLDELAISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKM 113
+++ SPD T++ L+ F + M +M R PE + ++LI G+
Sbjct: 414 KEIKVCKCSPDIVTWNTLLAVFGQNGMDSEVSGVFEEMKRSRFAPERDTFNTLISAYGRC 473
Query: 114 RAHSEALSVYNMLRYSKRSMCKALHEKILHILISGKLLKDA 154
+ +A++ Y + + S + + +L L G L + +
Sbjct: 474 GSFDQAMAAYKRMLEAGVSPDLSTYNAVLATLARGGLWEQS 514
Score = 38.9 bits (89), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 26/106 (24%), Positives = 47/106 (44%), Gaps = 3/106 (2%)
Query: 34 NSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHR 93
NS++ Y RT + + R++ + I PD +++I+I +C+ M A R + +M
Sbjct: 639 NSLMYMYSRTENFHKSEQIFREILDKGIEPDVISYNIVIYAYCRNDMMDEAKRIIEEMKV 698
Query: 94 KGHQPEEELCSSLIFHLGKMRAHSEALSVYNMLRYSKRSMCKALHE 139
P+ ++ I EA+ V +RY + CK H
Sbjct: 699 PAPVPDVVTYNTFIAAYAADSMFVEAIDV---IRYMIKQGCKPNHN 741
>gi|302784458|ref|XP_002974001.1| hypothetical protein SELMODRAFT_100394 [Selaginella moellendorffii]
gi|300158333|gb|EFJ24956.1| hypothetical protein SELMODRAFT_100394 [Selaginella moellendorffii]
Length = 561
Score = 49.3 bits (116), Expect = 6e-04, Method: Composition-based stats.
Identities = 30/130 (23%), Positives = 65/130 (50%), Gaps = 7/130 (5%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKY----DVVLLNSMLCAYCRTGDMESVMHVMRKL 56
++ A +SG EE Q+ FE+ + +VV +++ C+ G ++ + ++ +
Sbjct: 106 LVDALVKSGRVEEAFQI---FESMHTSSQCLPNVVTYTTVINGLCKDGKLDRAIELLDLM 162
Query: 57 DELAISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAH 116
+E P+ T+ +L++ CK + + +M R+G QP+ + ++L+ L K R
Sbjct: 163 NETGCCPNVITYSVLVEGLCKAGRTDKGFTLLQEMTRRGFQPDVIMYNTLLNGLCKSRRL 222
Query: 117 SEALSVYNML 126
EAL + ++
Sbjct: 223 DEALELVQLM 232
Score = 40.4 bits (93), Expect = 0.27, Method: Composition-based stats.
Identities = 19/99 (19%), Positives = 50/99 (50%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ C++G ++ L + + + DV++ N++L C++ ++ + +++ +
Sbjct: 177 LVEGLCKAGRTDKGFTLLQEMTRRGFQPDVIMYNTLLNGLCKSRRLDEALELVQLMIRSG 236
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPE 99
P T++ L++ FC+ K A+R + M +G P+
Sbjct: 237 CYPTVVTYNSLMELFCRSKQVDRAFRLIQVMSERGCPPD 275
>gi|302803484|ref|XP_002983495.1| hypothetical protein SELMODRAFT_118272 [Selaginella moellendorffii]
gi|300148738|gb|EFJ15396.1| hypothetical protein SELMODRAFT_118272 [Selaginella moellendorffii]
Length = 561
Score = 49.3 bits (116), Expect = 6e-04, Method: Composition-based stats.
Identities = 30/130 (23%), Positives = 65/130 (50%), Gaps = 7/130 (5%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKY----DVVLLNSMLCAYCRTGDMESVMHVMRKL 56
++ A +SG EE Q+ FE+ + +VV +++ C+ G ++ + ++ +
Sbjct: 106 LVDALVKSGRVEEAFQI---FESMHTSSQCLPNVVTYTTVINGLCKDGKLDRAIELLDLM 162
Query: 57 DELAISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAH 116
+E P+ T+ +L++ CK + + +M R+G QP+ + ++L+ L K R
Sbjct: 163 NETGCCPNVITYSVLVEGLCKAGRTDKGFTLLQEMTRRGFQPDVIMYNTLLNGLCKSRRL 222
Query: 117 SEALSVYNML 126
EAL + ++
Sbjct: 223 DEALELVQLM 232
Score = 40.4 bits (93), Expect = 0.27, Method: Composition-based stats.
Identities = 19/99 (19%), Positives = 50/99 (50%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ C++G ++ L + + + DV++ N++L C++ ++ + +++ +
Sbjct: 177 LVEGLCKAGRTDKGFTLLQEMTRRGFQPDVIMYNTLLNGLCKSRRLDEALELVQLMIRSG 236
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPE 99
P T++ L++ FC+ K A+R + M +G P+
Sbjct: 237 CYPTVVTYNSLMELFCRSKQVDRAFRLIQVMSERGCPPD 275
>gi|219363731|ref|NP_001136745.1| hypothetical protein [Zea mays]
gi|194696880|gb|ACF82524.1| unknown [Zea mays]
gi|414875980|tpg|DAA53111.1| TPA: hypothetical protein ZEAMMB73_920038 [Zea mays]
Length = 421
Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 45/83 (54%), Gaps = 5/83 (6%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHV---MRKLD 57
+IS FC++G + +A + A V N+++ YC+ G + + HV ++++
Sbjct: 74 VISGFCKTGQLRKAGDVAKNISAWGVAPSVATYNTLIDGYCKRGQVGKMYHVDALLKEMI 133
Query: 58 ELAISPDYNTFHILIK--YFCKE 78
+ ISPD TF++LI + C+E
Sbjct: 134 QAGISPDVVTFNVLINGYWLCRE 156
Score = 38.5 bits (88), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 26/124 (20%), Positives = 56/124 (45%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ F S + L + + K K DVV N ++ A C G++ + ++ ++ E+
Sbjct: 254 LITGFTTSRDWRSVSGLLDEMKEKGVKADVVTYNVLIGALCCKGEVRKAVKLLDEMVEVG 313
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ P + ++ +I FC++ A+ + M ++ + + + + KM EA
Sbjct: 314 LEPKHVAYNTIINGFCEKGDAQGAHEIRLRMEKRKKRANVVTYNVFLKYFCKMGKMDEAN 373
Query: 121 SVYN 124
V N
Sbjct: 374 VVLN 377
>gi|125582652|gb|EAZ23583.1| hypothetical protein OsJ_07284 [Oryza sativa Japonica Group]
Length = 667
Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 34/121 (28%), Positives = 51/121 (42%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C G E +L E D N+++ A C+ G + + L+
Sbjct: 222 LIRGQCIDGHIESAFRLLRLMEGDGLIADQYTYNALINALCKDGRTDQACSLFDSLETRG 281
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
I P+ TF+ LI CK +A++ + M G P+ SS I HL KM+ E L
Sbjct: 282 IKPNAVTFNSLINGLCKSGKADIAWKFLEKMVSAGCTPDTYTYSSFIEHLCKMKGSQEGL 341
Query: 121 S 121
S
Sbjct: 342 S 342
Score = 44.3 bits (103), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 28/127 (22%), Positives = 59/127 (46%), Gaps = 4/127 (3%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C +G +E +L G+ D+ D+ + +++ C E + ++R++ EL
Sbjct: 51 LIEGLCEAGRIDEAVELFGEM----DQPDMHMYAALVKGLCNAERGEEGLLMLRRMKELG 106
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
P + ++ + C+E+ A + +M KG P C+++I K S+AL
Sbjct: 107 WRPSTRAYAAVVDFRCRERKAKEAEEMLQEMFEKGLAPCVVTCTAVINAYCKEGRMSDAL 166
Query: 121 SVYNMLR 127
V +++
Sbjct: 167 RVLELMK 173
Score = 43.1 bits (100), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 23/98 (23%), Positives = 45/98 (45%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+A C+ G ++ L E + K + V NS++ C++G + + K+
Sbjct: 257 LINALCKDGRTDQACSLFDSLETRGIKPNAVTFNSLINGLCKSGKADIAWKFLEKMVSAG 316
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQP 98
+PD T+ I++ CK K + +M +K +P
Sbjct: 317 CTPDTYTYSSFIEHLCKMKGSQEGLSFIGEMLQKDVKP 354
Score = 42.7 bits (99), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 28/126 (22%), Positives = 63/126 (50%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+A+C+ G + ++ + + K +V N+++ +C G + M ++ K+
Sbjct: 152 VINAYCKEGRMSDALRVLELMKLRGCKPNVWTYNALVQGFCNEGKVHKAMTLLNKMRACG 211
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
++PD T+++LI+ C + A+R + M G ++ ++LI L K +A
Sbjct: 212 VNPDAVTYNLLIRGQCIDGHIESAFRLLRLMEGDGLIADQYTYNALINALCKDGRTDQAC 271
Query: 121 SVYNML 126
S+++ L
Sbjct: 272 SLFDSL 277
Score = 37.4 bits (85), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 27/112 (24%), Positives = 45/112 (40%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ FC G + L A D V N ++ C G +ES ++R ++
Sbjct: 187 LVQGFCNEGKVHKAMTLLNKMRACGVNPDAVTYNLLIRGQCIDGHIESAFRLLRLMEGDG 246
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGK 112
+ D T++ LI CK+ A + +G +P +SLI L K
Sbjct: 247 LIADQYTYNALINALCKDGRTDQACSLFDSLETRGIKPNAVTFNSLINGLCK 298
>gi|255580124|ref|XP_002530894.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223529547|gb|EEF31500.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 519
Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 46/96 (47%)
Query: 29 DVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYMLAYRTM 88
DV+ NS+L A+C+ G + + R++ I PD TF I I+ +C+ LAYR +
Sbjct: 247 DVLAYNSLLEAFCKGGKVSEAYKMFREMGSNGIKPDACTFSIFIRAYCEANDIHLAYRVL 306
Query: 89 VDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVYN 124
+M R P + +I L K EA + N
Sbjct: 307 DEMKRYDLVPNVFTYNCMIKKLCKKEKVEEAYQLLN 342
Score = 43.1 bits (100), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 22/99 (22%), Positives = 48/99 (48%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ AFC+ G E ++ + + K D + + AYC D+ V+ ++
Sbjct: 254 LLEAFCKGGKVSEAYKMFREMGSNGIKPDACTFSIFIRAYCEANDIHLAYRVLDEMKRYD 313
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPE 99
+ P+ T++ +IK CK++ AY+ + ++ + QP+
Sbjct: 314 LVPNVFTYNCMIKKLCKKEKVEEAYQLLNEIIERSGQPD 352
Score = 36.2 bits (82), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 25/118 (21%), Positives = 50/118 (42%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
MI C+ EE QL + + + D N++L +C ++ S ++ ++ +
Sbjct: 324 MIKKLCKKEKVEEAYQLLNEIIERSGQPDAWSYNAILAYHCEHSEVNSATRLISRMVKDN 383
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSE 118
PD +++++L+K + + A M KG P S ++ L K + E
Sbjct: 384 CLPDKHSYNMLLKLLIRVGRFDRAIEVWESMGEKGFYPSVSTYSVMVHGLCKKKGKLE 441
>gi|346703736|emb|CBX24404.1| hypothetical_protein [Oryza glaberrima]
Length = 1765
Score = 49.3 bits (116), Expect = 6e-04, Method: Composition-based stats.
Identities = 28/107 (26%), Positives = 49/107 (45%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I FC G L + + DVV +++ G + + V K+ E
Sbjct: 1328 LIHGFCMRGELMVASDLLVEMMGRGHTPDVVTFGALIHGLVVAGKVSEALIVREKMTERQ 1387
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLI 107
+ PD N +++LI CK++M A + +M K QP+E + ++LI
Sbjct: 1388 VFPDVNIYNVLISGLCKKRMLPAAKNILEEMLEKNVQPDEFVYATLI 1434
Score = 47.4 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 32/120 (26%), Positives = 59/120 (49%), Gaps = 4/120 (3%)
Query: 29 DVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYMLAYRTM 88
D++ N+++ C G + H +R+ ++P+ ++ LI FC M+A +
Sbjct: 1286 DIITFNTLITGLCHEGHVRKAEHFLREAIRRELNPNQLSYTPLIHGFCMRGELMVASDLL 1345
Query: 89 VDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVYNMLRYSKRSMCKALHEKILHILISG 148
V+M +GH P+ +LI L SEAL V + ++R + ++ I ++LISG
Sbjct: 1346 VEMMGRGHTPDVVTFGALIHGLVVAGKVSEALIVRE--KMTERQVFPDVN--IYNVLISG 1401
Score = 43.5 bits (101), Expect = 0.030, Method: Composition-based stats.
Identities = 29/107 (27%), Positives = 50/107 (46%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I F RS + +++ E K D+V N+M+ YC+ G M + M + ++
Sbjct: 1433 LIDGFIRSENLGDARKIFEFMEHKGICPDIVSCNAMIKGYCQFGMMSEAILCMSNMRKVG 1492
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLI 107
PD T+ +I + K+ A R + DM ++ +P SSLI
Sbjct: 1493 CIPDEFTYTTVISGYAKQGNLNGALRWLCDMIKRKCKPNVVTYSSLI 1539
Score = 41.2 bits (95), Expect = 0.13, Method: Composition-based stats.
Identities = 23/97 (23%), Positives = 48/97 (49%)
Query: 30 VVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYMLAYRTMV 89
VV N ++ YCR GDM + ++ +++ P T+ LI + K+ +
Sbjct: 1182 VVFYNVLIDGYCRRGDMGRGLLLLGEMETKGFLPTLVTYGSLINWLGKKGDLEKIGSLFL 1241
Query: 90 DMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVYNML 126
+M ++G P ++ +S+I L K R+ ++A+ + +
Sbjct: 1242 EMRKRGFSPNVQIYNSVIDALCKCRSATQAMVILKQM 1278
Score = 38.5 bits (88), Expect = 0.93, Method: Composition-based stats.
Identities = 27/95 (28%), Positives = 47/95 (49%), Gaps = 3/95 (3%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+IS + + G + D + K +VV +S++ YC+TGD + + + A
Sbjct: 1503 VISGYAKQGNLNGALRWLCDMIKRKCKPNVVTYSSLINGYCKTGDTDFAEGLFANMQAEA 1562
Query: 61 ISPDYNTFHILI-KYFCKEKMYM--LAYRTMVDMH 92
+SP+ T+ ILI F K+K+ L + TM+ H
Sbjct: 1563 LSPNVVTYTILIGSLFKKDKVLRAGLYFETMLLNH 1597
Score = 35.0 bits (79), Expect = 9.6, Method: Composition-based stats.
Identities = 27/117 (23%), Positives = 50/117 (42%), Gaps = 3/117 (2%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I +CR G L G+ E K +V S++ + GD+E + + ++ +
Sbjct: 1188 LIDGYCRRGDMGRGLLLLGEMETKGFLPTLVTYGSLINWLGKKGDLEKIGSLFLEMRKRG 1247
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIF---HLGKMR 114
SP+ ++ +I CK + A + M G P+ ++LI H G +R
Sbjct: 1248 FSPNVQIYNSVIDALCKCRSATQAMVILKQMFASGCDPDIITFNTLITGLCHEGHVR 1304
>gi|218186396|gb|EEC68823.1| hypothetical protein OsI_37392 [Oryza sativa Indica Group]
Length = 1370
Score = 49.3 bits (116), Expect = 6e-04, Method: Composition-based stats.
Identities = 28/107 (26%), Positives = 49/107 (45%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I FC G L + + DVV +++ G + + V K+ E
Sbjct: 1142 LIHGFCMRGELMVASDLLVEMMGRGHTPDVVTFGALIHGLVVAGKVSEALIVREKMTERQ 1201
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLI 107
+ PD N +++LI CK++M A + +M K QP+E + ++LI
Sbjct: 1202 VFPDVNIYNVLISGLCKKRMLPAAKNILEEMLEKNVQPDEFVYATLI 1248
Score = 47.8 bits (112), Expect = 0.002, Method: Composition-based stats.
Identities = 32/120 (26%), Positives = 59/120 (49%), Gaps = 4/120 (3%)
Query: 29 DVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYMLAYRTM 88
D++ N+++ C G + H +R+ ++P+ ++ LI FC M+A +
Sbjct: 1100 DIITFNTLMTGLCHEGHVRKAEHFLREAIRRELNPNQLSYTPLIHGFCMRGELMVASDLL 1159
Query: 89 VDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVYNMLRYSKRSMCKALHEKILHILISG 148
V+M +GH P+ +LI L SEAL V + ++R + ++ I ++LISG
Sbjct: 1160 VEMMGRGHTPDVVTFGALIHGLVVAGKVSEALIVRE--KMTERQVFPDVN--IYNVLISG 1215
Score = 39.3 bits (90), Expect = 0.53, Method: Composition-based stats.
Identities = 22/97 (22%), Positives = 47/97 (48%)
Query: 30 VVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYMLAYRTMV 89
VV N ++ YCR GDM + ++ +++ P T+ LI + K+ +
Sbjct: 996 VVFYNVLIDGYCRRGDMGRGLLLLGEMETKGFLPTLVTYGSLINWLGKKGDLEKIGSLFL 1055
Query: 90 DMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVYNML 126
+M ++G P ++ +S+I L R+ ++A+ + +
Sbjct: 1056 EMRKRGFSPNVQIYNSVIDALCNCRSATQAMVILKQM 1092
>gi|108862162|gb|ABA95747.2| Cytochrome P450 family protein [Oryza sativa Japonica Group]
Length = 1595
Score = 49.3 bits (116), Expect = 6e-04, Method: Composition-based stats.
Identities = 28/107 (26%), Positives = 49/107 (45%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I FC G L + + DVV +++ G + + V K+ E
Sbjct: 1159 LIHGFCMRGELMVASDLLVEMMGRGHTPDVVTFGALIHGLVVAGKVSEALIVREKMTERQ 1218
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLI 107
+ PD N +++LI CK++M A + +M K QP+E + ++LI
Sbjct: 1219 VFPDVNIYNVLISGLCKKRMLPAAKNILEEMLEKNVQPDEFVYATLI 1265
Score = 47.4 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 32/120 (26%), Positives = 59/120 (49%), Gaps = 4/120 (3%)
Query: 29 DVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYMLAYRTM 88
D++ N+++ C G + H +R+ ++P+ ++ LI FC M+A +
Sbjct: 1117 DIITFNTLITGLCHEGHVRKAEHFLREAIRRELNPNQLSYTPLIHGFCMRGELMVASDLL 1176
Query: 89 VDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVYNMLRYSKRSMCKALHEKILHILISG 148
V+M +GH P+ +LI L SEAL V + ++R + ++ I ++LISG
Sbjct: 1177 VEMMGRGHTPDVVTFGALIHGLVVAGKVSEALIVRE--KMTERQVFPDVN--IYNVLISG 1232
Score = 43.5 bits (101), Expect = 0.030, Method: Composition-based stats.
Identities = 29/107 (27%), Positives = 50/107 (46%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I F RS + +++ E K D+V N+M+ YC+ G M + M + ++
Sbjct: 1264 LIDGFIRSENLGDARKIFEFMEHKGVCPDIVSCNAMIKGYCQFGMMSEAILCMSNMRKVG 1323
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLI 107
PD T+ +I + K+ A R + DM ++ +P SSLI
Sbjct: 1324 CIPDEFTYTTVISGYAKQGNLNGALRWLCDMIKRKCKPNVVTYSSLI 1370
Score = 41.2 bits (95), Expect = 0.15, Method: Composition-based stats.
Identities = 28/95 (29%), Positives = 48/95 (50%), Gaps = 3/95 (3%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+IS + + G + D + K +VV +S++ YC+TGD +S + + A
Sbjct: 1334 VISGYAKQGNLNGALRWLCDMIKRKCKPNVVTYSSLINGYCKTGDTDSAEGLFANMQAEA 1393
Query: 61 ISPDYNTFHILI-KYFCKEKMYM--LAYRTMVDMH 92
+SP+ T+ ILI F K+K+ L + TM+ H
Sbjct: 1394 LSPNVVTYTILIGSLFKKDKVLRAGLYFETMLLNH 1428
Score = 38.9 bits (89), Expect = 0.69, Method: Composition-based stats.
Identities = 22/97 (22%), Positives = 47/97 (48%)
Query: 30 VVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYMLAYRTMV 89
VV N ++ YCR GDM + ++ +++ P T+ LI + K+ +
Sbjct: 1013 VVFYNVLIDGYCRRGDMGRGLLLLGEMETNGFLPTLVTYGSLINWLGKKGDLEKIGSLFL 1072
Query: 90 DMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVYNML 126
+M ++G P ++ +S+I L R+ ++A+ + +
Sbjct: 1073 EMRKRGFSPNVQIYNSVIDALCNCRSATQAMVILKQM 1109
>gi|357144033|ref|XP_003573143.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At5g38730-like [Brachypodium distachyon]
Length = 599
Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 29/107 (27%), Positives = 50/107 (46%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C G +E L + + + + D V N+++ +Y + GDM S V +++ E
Sbjct: 327 IIRKLCEDGKMKEVNGLLSEMDGRKVQADHVTCNTLINSYAKRGDMTSACKVKKRMMESG 386
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLI 107
+ D T+ LI FCK K A + +M +G P + S L+
Sbjct: 387 LQLDQFTYKALIHGFCKAKELDEAKEALFEMMGRGFSPNYSVFSWLV 433
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/154 (20%), Positives = 67/154 (43%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C+ G +E QL D A + D V +++ YCR GD+ + + +++
Sbjct: 257 VIHGLCKEGRMKEAAQLRTDMIAAAVEPDTVTYTTLVDGYCRIGDVGEAVKLREEMEAGG 316
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ P T++ +I+ C++ + +M + Q + C++LI K + A
Sbjct: 317 MVPGVATYNAIIRKLCEDGKMKEVNGLLSEMDGRKVQADHVTCNTLINSYAKRGDMTSAC 376
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLKDA 154
V + S + + ++ ++H K L +A
Sbjct: 377 KVKKRMMESGLQLDQFTYKALIHGFCKAKELDEA 410
Score = 40.8 bits (94), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 27/124 (21%), Positives = 65/124 (52%), Gaps = 3/124 (2%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I FC++ +E K+ + + + + + ++ +C+ + ++V+ + +L +
Sbjct: 397 LIHGFCKAKELDEAKEALFEMMGRGFSPNYSVFSWLVDGFCKKNNTDAVLLIPDELIKRG 456
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIF-HL--GKMRAHS 117
+ PD + + LI+ CK+ + LA + + M KG + + + ++L + HL GK+ A S
Sbjct: 457 LPPDKSVYRSLIRRLCKKGLVDLAQKVLHQMQGKGLEVDCLVYATLAYAHLTAGKVAAAS 516
Query: 118 EALS 121
+ L+
Sbjct: 517 DILN 520
>gi|297835244|ref|XP_002885504.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297331344|gb|EFH61763.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 618
Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 53/119 (44%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I + C+ G ++ L + E K K DVV +S++ C G + ++R++
Sbjct: 250 VIDSLCKDGNLDDALSLFNEMEMKGIKADVVAYSSIIGGLCNDGRWDDGAKMLREMIGRN 309
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEA 119
I P+ TF LI F KE + A +M +G P+ SSLI K EA
Sbjct: 310 IIPNVVTFSALIDVFVKEGKLLEAKELYNEMVARGIAPDTITYSSLIDGFCKENRLGEA 368
Score = 42.7 bits (99), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 28/155 (18%), Positives = 70/155 (45%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I FC+ E Q+ +K + ++V + ++ +YC+ +++ M + ++
Sbjct: 355 LIDGFCKENRLGEANQMLDLMVSKGCEPNIVTYSILINSYCKAKRVDNGMRLFCEISSKG 414
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ D T++ L++ FC+ +A +M +G P L+ L +AL
Sbjct: 415 LVADTVTYNTLVQGFCQSGKLNVAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELQKAL 474
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLKDAY 155
++ ++ S+ + ++ I+H + + + DA+
Sbjct: 475 EIFEKMQKSRMILGIGIYNIIIHGMCNASKVDDAW 509
Score = 37.4 bits (85), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 25/119 (21%), Positives = 51/119 (42%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ FC+SG K+L + ++ VV +L C G+++ + + K+ +
Sbjct: 425 LVQGFCQSGKLNVAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELQKALEIFEKMQKSR 484
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEA 119
+ ++I+I C A+ + KG +P+ + +I L K + SEA
Sbjct: 485 MILGIGIYNIIIHGMCNASKVDDAWSLFCSLSVKGVKPDVLTYNVMIGGLCKKGSLSEA 543
Score = 36.6 bits (83), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 21/95 (22%), Positives = 41/95 (43%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I F + G E K+L + A+ D + +S++ +C+ + ++ +
Sbjct: 320 LIDVFVKEGKLLEAKELYNEMVARGIAPDTITYSSLIDGFCKENRLGEANQMLDLMVSKG 379
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKG 95
P+ T+ ILI +CK K R ++ KG
Sbjct: 380 CEPNIVTYSILINSYCKAKRVDNGMRLFCEISSKG 414
>gi|255569680|ref|XP_002525805.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223534892|gb|EEF36579.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 182
Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 30/114 (26%), Positives = 48/114 (42%), Gaps = 2/114 (1%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ FC G + L + + K D V N ++ C+ G + + L
Sbjct: 31 LLDGFCNQGHLDMALALFHEMQKNTLKLDCVAYNIIVDGMCKAGKLNDAKELFSTLPIEG 90
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMR 114
+ PD T++ILIK FC E AY+ +M G P+ CS + G +R
Sbjct: 91 LQPDVRTYNILIKVFCNEGSLEEAYQVFREMEEGGSLPDG--CSYNVIIQGFLR 142
Score = 41.2 bits (95), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 21/95 (22%), Positives = 46/95 (48%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ C++G + K+L + + DV N ++ +C G +E V R+++E
Sbjct: 66 IVDGMCKAGKLNDAKELFSTLPIEGLQPDVRTYNILIKVFCNEGSLEEAYQVFREMEEGG 125
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKG 95
PD +++++I+ F + A + + +M KG
Sbjct: 126 SLPDGCSYNVIIQGFLRHNDLSGATQLIHEMIDKG 160
>gi|147790305|emb|CAN63320.1| hypothetical protein VITISV_026425 [Vitis vinifera]
Length = 722
Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 42/170 (24%), Positives = 74/170 (43%), Gaps = 16/170 (9%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+++ FCR +E QL FE + DVV N++L A C+ G+ + V+ +++
Sbjct: 439 ILNGFCRENHIDEALQLFDHFEWANNSPDVVSFNTILSAACKQGNSSMIRRVLYRMEYEG 498
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPE--------EELCSS------- 105
+ + + LI+YFC + M R G P ++LC +
Sbjct: 499 VKLNVVSSTCLIQYFCAIGKISECLELLESMIRNGLNPTVVTFNMLLDKLCKNGLLGTAH 558
Query: 106 LIFHLGKMRAHSEALSVYNMLRY-SKRSMCKALHEKILHILISGKLLKDA 154
IF + + + YN+L + S R +L E++L + S +L DA
Sbjct: 559 RIFREFRNTGYFPNTTSYNILIHASIREGNDSLVEQLLRDMYSWRLKPDA 608
>gi|125544564|gb|EAY90703.1| hypothetical protein OsI_12306 [Oryza sativa Indica Group]
Length = 644
Score = 49.3 bits (116), Expect = 6e-04, Method: Composition-based stats.
Identities = 29/110 (26%), Positives = 54/110 (49%), Gaps = 6/110 (5%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYC---RTGDMESVMHVMRKLD 57
+++A C GC +E L + D+V N++L C R GD+E +M M ++D
Sbjct: 187 VLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKRWGDVEELMDEMVRVD 246
Query: 58 ELAISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLI 107
+P+ TF+ LI Y C+ ++ + + M G P+ + +++I
Sbjct: 247 ---CAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATII 293
Score = 45.4 bits (106), Expect = 0.007, Method: Composition-based stats.
Identities = 32/126 (25%), Positives = 55/126 (43%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ FC+ G +E L + K + V +L C G +M ++ +
Sbjct: 397 VINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQG 456
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
P+ TF+ LI + CK+ + A + M G P+ S++I LGK EAL
Sbjct: 457 CPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEAL 516
Query: 121 SVYNML 126
+ N++
Sbjct: 517 ELLNVM 522
Score = 37.4 bits (85), Expect = 2.0, Method: Composition-based stats.
Identities = 21/112 (18%), Positives = 52/112 (46%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ FC++G + +L + DV+ +++ +C+ G ++ + +++ +
Sbjct: 362 LVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCG 421
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGK 112
P+ ++ I++K C ++ A M M ++G P ++LI L K
Sbjct: 422 CKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCK 473
Score = 37.0 bits (84), Expect = 2.6, Method: Composition-based stats.
Identities = 16/94 (17%), Positives = 42/94 (44%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I CR+G FE ++ D+ + +++ C+ G +E ++ ++
Sbjct: 257 LIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMPSYG 316
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRK 94
+ P+ ++ ++K C + + A + +M +K
Sbjct: 317 LKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQK 350
Score = 37.0 bits (84), Expect = 2.9, Method: Composition-based stats.
Identities = 22/98 (22%), Positives = 46/98 (46%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ C + ++E ++L + K D V N ++ +C+ G ++ V+ ++ ++
Sbjct: 327 VLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHG 386
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQP 98
PD T+ +I FCKE + A + M G +P
Sbjct: 387 CMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKP 424
Score = 36.6 bits (83), Expect = 3.2, Method: Composition-based stats.
Identities = 28/110 (25%), Positives = 49/110 (44%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ A CRSG F + ++ AK D N +L A C G ++ + ++RKL
Sbjct: 152 ILEAACRSGGFRNSVRVLEAMHAKGCTLDTGNCNLVLNAICEQGCVDEAVGLLRKLAFFG 211
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHL 110
D +++ ++K C K + M +M R P ++LI +L
Sbjct: 212 CEADIVSYNAVLKGLCMAKRWGDVEELMDEMVRVDCAPNIVTFNTLIGYL 261
>gi|108709396|gb|ABF97191.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|215687193|dbj|BAG91758.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222625245|gb|EEE59377.1| hypothetical protein OsJ_11489 [Oryza sativa Japonica Group]
Length = 644
Score = 49.3 bits (116), Expect = 6e-04, Method: Composition-based stats.
Identities = 29/110 (26%), Positives = 54/110 (49%), Gaps = 6/110 (5%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYC---RTGDMESVMHVMRKLD 57
+++A C GC +E L + D+V N++L C R GD+E +M M ++D
Sbjct: 187 VLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKRWGDVEELMDEMVRVD 246
Query: 58 ELAISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLI 107
+P+ TF+ LI Y C+ ++ + + M G P+ + +++I
Sbjct: 247 ---CAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATII 293
Score = 45.4 bits (106), Expect = 0.007, Method: Composition-based stats.
Identities = 32/126 (25%), Positives = 55/126 (43%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ FC+ G +E L + K + V +L C G +M ++ +
Sbjct: 397 VINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQG 456
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
P+ TF+ LI + CK+ + A + M G P+ S++I LGK EAL
Sbjct: 457 CPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEAL 516
Query: 121 SVYNML 126
+ N++
Sbjct: 517 ELLNVM 522
Score = 37.4 bits (85), Expect = 2.0, Method: Composition-based stats.
Identities = 21/112 (18%), Positives = 52/112 (46%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ FC++G + +L + DV+ +++ +C+ G ++ + +++ +
Sbjct: 362 LVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCG 421
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGK 112
P+ ++ I++K C ++ A M M ++G P ++LI L K
Sbjct: 422 CKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCK 473
Score = 37.0 bits (84), Expect = 2.6, Method: Composition-based stats.
Identities = 16/94 (17%), Positives = 42/94 (44%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I CR+G FE ++ D+ + +++ C+ G +E ++ ++
Sbjct: 257 LIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMPSYG 316
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRK 94
+ P+ ++ ++K C + + A + +M +K
Sbjct: 317 LKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQK 350
Score = 37.0 bits (84), Expect = 2.9, Method: Composition-based stats.
Identities = 22/98 (22%), Positives = 46/98 (46%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ C + ++E ++L + K D V N ++ +C+ G ++ V+ ++ ++
Sbjct: 327 VLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHG 386
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQP 98
PD T+ +I FCKE + A + M G +P
Sbjct: 387 CMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKP 424
Score = 36.6 bits (83), Expect = 3.2, Method: Composition-based stats.
Identities = 28/110 (25%), Positives = 49/110 (44%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ A CRSG F + ++ AK D N +L A C G ++ + ++RKL
Sbjct: 152 ILEAACRSGGFRNSVRVLEAMHAKGCTLDTGNCNLVLNAICEQGCVDEAVGLLRKLAFFG 211
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHL 110
D +++ ++K C K + M +M R P ++LI +L
Sbjct: 212 CEADIVSYNAVLKGLCMAKRWGDVEELMDEMVRVDCAPNIVTFNTLIGYL 261
>gi|449455956|ref|XP_004145716.1| PREDICTED: pentatricopeptide repeat-containing protein At5g16420,
mitochondrial-like [Cucumis sativus]
gi|449492939|ref|XP_004159147.1| PREDICTED: pentatricopeptide repeat-containing protein At5g16420,
mitochondrial-like [Cucumis sativus]
Length = 535
Score = 49.3 bits (116), Expect = 6e-04, Method: Composition-based stats.
Identities = 38/154 (24%), Positives = 68/154 (44%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I A C+ E +++ + + +VV ++L Y GDM V +L +
Sbjct: 198 LIKALCKKNDVEGARKVFDEMPSMGIVPNVVTYTTILGGYVSRGDMIGAKRVFGELFDHG 257
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
PD T+ IL+ + K+ + A + M +M G +P + +I K R EAL
Sbjct: 258 WLPDATTYTILMDGYVKQGRFTDAVKVMDEMEENGVEPNDITYGVIILGYCKERKSGEAL 317
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLKDA 154
++ N + K AL K++ +L +K+A
Sbjct: 318 NLLNDMLEKKYIPNSALCCKVIDVLCGEGRVKEA 351
>gi|302758218|ref|XP_002962532.1| hypothetical protein SELMODRAFT_404389 [Selaginella moellendorffii]
gi|300169393|gb|EFJ35995.1| hypothetical protein SELMODRAFT_404389 [Selaginella moellendorffii]
Length = 1031
Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 29/121 (23%), Positives = 61/121 (50%), Gaps = 8/121 (6%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+ AFC++G ++ ++ + + D + N+++ +CR D + + +++++E
Sbjct: 201 LTRAFCKTGRLKDALEIFRNIPSP----DAIAYNAIIHGHCRKNDCDGALEFLKEMNERK 256
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKM----RAH 116
++PD T++ILI CK A + +M +G P+ +S++ L K RAH
Sbjct: 257 VAPDVFTYNILIDGLCKASKTDKASEMLHEMVDRGVTPDTVTFNSIMDGLCKAGKFERAH 316
Query: 117 S 117
S
Sbjct: 317 S 317
Score = 39.3 bits (90), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 21/98 (21%), Positives = 41/98 (41%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+ C+ G +E +L + K ++V N+++ C+ E ++ L
Sbjct: 372 LADGLCKRGRIDEAFELVKEMSGKGCTPNLVTYNTLIDGLCKASKTEKAYELLESLVSSG 431
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQP 98
PD T+ I++ CKE A + + M ++G P
Sbjct: 432 FVPDVVTYTIIVDGLCKEGRLDKALKMVEGMLKRGCTP 469
Score = 38.9 bits (89), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 25/100 (25%), Positives = 48/100 (48%), Gaps = 1/100 (1%)
Query: 29 DVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYMLAYRTM 88
DVV N ++ + + V+ ++ + I PD T++ L+ FCKE+ + A +
Sbjct: 607 DVVSYNIIIDGLFKASKPKEARQVLDQMIQAGIPPDAVTYNTLMAQFCKEERFDDAVGIL 666
Query: 89 VDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSV-YNMLR 127
+M + G P+ ++LI L + +A + + MLR
Sbjct: 667 KNMIKAGVDPDNVTYNTLISGLSQTNRLGDAYELMHEMLR 706
Score = 38.9 bits (89), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 21/99 (21%), Positives = 43/99 (43%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+IS C+ + K L +F + DVV + + C+ G ++ +++++
Sbjct: 337 LISGLCKQQNVDRAKDLVDEFVSSGFVPDVVTYSILADGLCKRGRIDEAFELVKEMSGKG 396
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPE 99
+P+ T++ LI CK AY + + G P+
Sbjct: 397 CTPNLVTYNTLIDGLCKASKTEKAYELLESLVSSGFVPD 435
Score = 36.6 bits (83), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 25/126 (19%), Positives = 57/126 (45%), Gaps = 3/126 (2%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+++ +C+S +E +++ Y + + N+++ YC+ G ++ + +V +
Sbjct: 512 LVNGYCKSSRTKEAQKVVDGIRGT--PY-IDVYNALMDGYCKEGRLDEIPNVFEDMACRG 568
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
P+ T++I++ CK A+ + MH G P+ + +I L K EA
Sbjct: 569 CVPNIKTYNIVMDGLCKHGKVDEAFPFLESMHSAGCVPDVVSYNIIIDGLFKASKPKEAR 628
Query: 121 SVYNML 126
V + +
Sbjct: 629 QVLDQM 634
>gi|293335157|ref|NP_001169529.1| uncharacterized protein LOC100383403 [Zea mays]
gi|224029903|gb|ACN34027.1| unknown [Zea mays]
gi|414887232|tpg|DAA63246.1| TPA: hypothetical protein ZEAMMB73_160132 [Zea mays]
Length = 819
Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 34/153 (22%), Positives = 66/153 (43%), Gaps = 3/153 (1%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+IS C+ G + E+ + D + +S++C+Y + G + + E
Sbjct: 546 LISGSCKLGRYVESLKFFEDMLDLNIHLTKEVYSSVICSYVKQGKLTEAASTFNSMKETG 605
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
PD T+ LIK + + + A+ +M G QP+ +CSSL+ L K +
Sbjct: 606 CFPDVLTYTTLIKAYSDDGSWRRAWDLFKEMENNGTQPDAIVCSSLMEALNK---GGQPE 662
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLKD 153
V ++ + K+ + + I+ S +L+D
Sbjct: 663 RVLQLIEFMKQKKIQLNQKAYFEIISSCTMLRD 695
Score = 35.8 bits (81), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 46/99 (46%)
Query: 29 DVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYMLAYRTM 88
+ V NS + +Y GD + + + + + PD T++ILI CK Y+ + +
Sbjct: 504 NTVAYNSGIGSYLSLGDYKKALVLYTSMRAGNVKPDAVTYNILISGSCKLGRYVESLKFF 563
Query: 89 VDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVYNMLR 127
DM +E+ SS+I K +EA S +N ++
Sbjct: 564 EDMLDLNIHLTKEVYSSVICSYVKQGKLTEAASTFNSMK 602
Score = 35.4 bits (80), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 27/126 (21%), Positives = 56/126 (44%)
Query: 29 DVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYMLAYRTM 88
DVV S++ +Y G E+ V + + P+ +++ L+ + M+ A T
Sbjct: 329 DVVTYTSIMYSYSVCGQAENCKAVFDIMVAEGVRPNIVSYNALLGAYASHGMHTEALETF 388
Query: 89 VDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVYNMLRYSKRSMCKALHEKILHILISG 148
+ + G +P+ +SL+ G+ +A V+N +R + K + ++ S
Sbjct: 389 KLLKQNGLRPDIVSYTSLLNAYGRSAQPEKAREVFNEMRKNACKPNKVSYNALIDAYGSA 448
Query: 149 KLLKDA 154
+LK+A
Sbjct: 449 GMLKEA 454
>gi|115453829|ref|NP_001050515.1| Os03g0569800 [Oryza sativa Japonica Group]
gi|113548986|dbj|BAF12429.1| Os03g0569800 [Oryza sativa Japonica Group]
Length = 773
Score = 49.3 bits (116), Expect = 6e-04, Method: Composition-based stats.
Identities = 29/110 (26%), Positives = 54/110 (49%), Gaps = 6/110 (5%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYC---RTGDMESVMHVMRKLD 57
+++A C GC +E L + D+V N++L C R GD+E +M M ++D
Sbjct: 187 VLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKRWGDVEELMDEMVRVD 246
Query: 58 ELAISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLI 107
+P+ TF+ LI Y C+ ++ + + M G P+ + +++I
Sbjct: 247 ---CAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATII 293
Score = 45.4 bits (106), Expect = 0.008, Method: Composition-based stats.
Identities = 32/126 (25%), Positives = 55/126 (43%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ FC+ G +E L + K + V +L C G +M ++ +
Sbjct: 397 VINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQG 456
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
P+ TF+ LI + CK+ + A + M G P+ S++I LGK EAL
Sbjct: 457 CPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEAL 516
Query: 121 SVYNML 126
+ N++
Sbjct: 517 ELLNVM 522
Score = 37.4 bits (85), Expect = 2.1, Method: Composition-based stats.
Identities = 21/112 (18%), Positives = 52/112 (46%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ FC++G + +L + DV+ +++ +C+ G ++ + +++ +
Sbjct: 362 LVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCG 421
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGK 112
P+ ++ I++K C ++ A M M ++G P ++LI L K
Sbjct: 422 CKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCK 473
Score = 37.0 bits (84), Expect = 2.6, Method: Composition-based stats.
Identities = 16/94 (17%), Positives = 42/94 (44%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I CR+G FE ++ D+ + +++ C+ G +E ++ ++
Sbjct: 257 LIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMPSYG 316
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRK 94
+ P+ ++ ++K C + + A + +M +K
Sbjct: 317 LKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQK 350
Score = 36.6 bits (83), Expect = 3.1, Method: Composition-based stats.
Identities = 22/98 (22%), Positives = 46/98 (46%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ C + ++E ++L + K D V N ++ +C+ G ++ V+ ++ ++
Sbjct: 327 VLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHG 386
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQP 98
PD T+ +I FCKE + A + M G +P
Sbjct: 387 CMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKP 424
Score = 36.6 bits (83), Expect = 3.2, Method: Composition-based stats.
Identities = 28/110 (25%), Positives = 49/110 (44%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ A CRSG F + ++ AK D N +L A C G ++ + ++RKL
Sbjct: 152 ILEAACRSGGFRNSVRVLEAMHAKGCTLDTGNCNLVLNAICEQGCVDEAVGLLRKLAFFG 211
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHL 110
D +++ ++K C K + M +M R P ++LI +L
Sbjct: 212 CEADIVSYNAVLKGLCMAKRWGDVEELMDEMVRVDCAPNIVTFNTLIGYL 261
>gi|147742776|gb|ABQ50556.1| hypothetical protein [Brassica rapa]
Length = 348
Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 24/86 (27%), Positives = 44/86 (51%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I + C++G ++E L + E + K DV+ NS++ +C G + ++R +
Sbjct: 262 IIDSLCKNGNYDEALSLFNEMEREGIKADVITYNSLIGGFCNAGRWDDGAQLLRDMITRN 321
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYR 86
I+P+ TF LI F KE + +R
Sbjct: 322 ITPNVVTFSALIDCFVKEGKLINEHR 347
Score = 38.9 bits (89), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 25/107 (23%), Positives = 47/107 (43%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+++ C+SG L E K K VV N ++ + C+ G+ + + + +++
Sbjct: 227 ILNRICKSGNTVSALDLLRKMEDKKVKPQVVTYNMIIDSLCKNGNYDEALSLFNEMEREG 286
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLI 107
I D T++ LI FC + + + DM + P S+LI
Sbjct: 287 IKADVITYNSLIGGFCNAGRWDDGAQLLRDMITRNITPNVVTFSALI 333
>gi|224130790|ref|XP_002328377.1| predicted protein [Populus trichocarpa]
gi|222838092|gb|EEE76457.1| predicted protein [Populus trichocarpa]
Length = 688
Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 30/154 (19%), Positives = 71/154 (46%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ C G + +L + + DV+ N+++ C +G+ +HV +K+++
Sbjct: 169 LINGVCNEGKIKVAVELYNEMVRSGHEPDVISYNTLINGLCNSGNTNMAVHVFKKMEQNG 228
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
P+ T++ +I CK+++ A + +M +G P+ +S++ L + +EA
Sbjct: 229 CKPNVVTYNTIIDSLCKDRLVNDAMDFLSEMVGRGIPPDAITYNSIVHGLCCLGQLNEAT 288
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLKDA 154
++ + + + I+ L +L+ DA
Sbjct: 289 RLFKRMEQNGCKPDVVTYNIIIDSLYKDRLVNDA 322
Score = 45.1 bits (105), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 32/122 (26%), Positives = 54/122 (44%)
Query: 33 LNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYMLAYRTMVDMH 92
LN ++ CR ++ + V K+ +L I PD TF LI C E +A +M
Sbjct: 131 LNILINCLCRLNHVDFAVSVWGKMFKLGIQPDVITFTTLINGVCNEGKIKVAVELYNEMV 190
Query: 93 RKGHQPEEELCSSLIFHLGKMRAHSEALSVYNMLRYSKRSMCKALHEKILHILISGKLLK 152
R GH+P+ ++LI L + A+ V+ + + + I+ L +L+
Sbjct: 191 RSGHEPDVISYNTLINGLCNSGNTNMAVHVFKKMEQNGCKPNVVTYNTIIDSLCKDRLVN 250
Query: 153 DA 154
DA
Sbjct: 251 DA 252
Score = 37.4 bits (85), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 19/95 (20%), Positives = 43/95 (45%)
Query: 29 DVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYMLAYRTM 88
DVV ++L C G + + + +K+++ PD ++ +I CK+++ A +
Sbjct: 337 DVVTYTTILHGLCYLGQLNEAIRLFKKMEQKGCKPDVVAYNTIIDSLCKDRLVNDAMEFL 396
Query: 89 VDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVY 123
+M +G P S+++ + EA ++
Sbjct: 397 SEMVDRGIPPNAVTYSTILHGFCNLGQLDEATQLF 431
Score = 37.4 bits (85), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 19/99 (19%), Positives = 42/99 (42%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I + C+ + + + + + V +++L +C G ++ + +++
Sbjct: 379 IIDSLCKDRLVNDAMEFLSEMVDRGIPPNAVTYSTILHGFCNLGQLDEATQLFKEMVGRN 438
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPE 99
+ P+ TF IL+ C+E M A M KG +P
Sbjct: 439 VMPNTLTFSILVDGLCQEGMVSEARWVFETMTEKGVEPN 477
Score = 37.0 bits (84), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 25/154 (16%), Positives = 65/154 (42%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I + C+ + + + D + NS++ C G + + +++++
Sbjct: 239 IIDSLCKDRLVNDAMDFLSEMVGRGIPPDAITYNSIVHGLCCLGQLNEATRLFKRMEQNG 298
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
PD T++I+I K+++ A + +M +G P+ ++++ L + +EA+
Sbjct: 299 CKPDVVTYNIIIDSLYKDRLVNDAADFLSEMVDQGIPPDVVTYTTILHGLCYLGQLNEAI 358
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLKDA 154
++ + + I+ L +L+ DA
Sbjct: 359 RLFKKMEQKGCKPDVVAYNTIIDSLCKDRLVNDA 392
>gi|32489931|emb|CAE05523.1| OSJNBa0038P21.16 [Oryza sativa Japonica Group]
gi|38347491|emb|CAE05839.2| OSJNBa0091C07.1 [Oryza sativa Japonica Group]
Length = 844
Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 30/119 (25%), Positives = 52/119 (43%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ C+ G E K + + +VV NS++ YC G+ME ++ + +
Sbjct: 534 IINNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMASIG 593
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEA 119
I P+ + L+ +CK A DM KG +P L S ++ L + R + A
Sbjct: 594 IEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYSIILHGLFQARRTTAA 652
Score = 45.1 bits (105), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 21/107 (19%), Positives = 47/107 (43%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ CR+ C +E L A K+D++ N ++ A + G + + +
Sbjct: 674 VLGGLCRNNCTDEANMLLEKLFAMNVKFDIITFNIVISAMFKVGRRQEAKELFDAISTYG 733
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLI 107
+ P+ T+ ++I KE+ Y A + + + GH + L + ++
Sbjct: 734 LVPNIQTYSMMITNLIKEESYEEADNLFISVEKSGHASDSRLLNHIV 780
Score = 41.2 bits (95), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 23/97 (23%), Positives = 48/97 (49%)
Query: 30 VVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYMLAYRTMV 89
+++ NS++ C+ +M+ +++K+ + I+PD T+ ++I CK K A R +
Sbjct: 245 ILICNSIIKELCKMKEMDKAESIVQKMVDSGIAPDLFTYSLIIDGLCKSKAMDKAERVLE 304
Query: 90 DMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVYNML 126
M G +P +SLI +E++ V+ +
Sbjct: 305 QMVEAGTRPNSITYNSLIHGYSISGMWNESVRVFKQM 341
Score = 37.0 bits (84), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 31/125 (24%), Positives = 55/125 (44%), Gaps = 2/125 (1%)
Query: 2 ISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGD--MESVMHVMRKLDEL 59
I A + G E K + K K D++ ++ML Y D + V ++ +
Sbjct: 357 IHALFKHGRTNEAKCIFDSMVLKGPKPDIISYSTMLHGYATATDSCLADVHNIFNLMLTK 416
Query: 60 AISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEA 119
I+P+ + F+ILI + + M A DM KG P+ +++I L ++ +A
Sbjct: 417 GIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCRIGRLDDA 476
Query: 120 LSVYN 124
L +N
Sbjct: 477 LHKFN 481
>gi|357140210|ref|XP_003571663.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g74580-like [Brachypodium distachyon]
Length = 841
Score = 48.9 bits (115), Expect = 6e-04, Method: Composition-based stats.
Identities = 33/128 (25%), Positives = 59/128 (46%), Gaps = 15/128 (11%)
Query: 2 ISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAI 61
IS CR E Q + + + + NS++ A+CR G + + + +K+ + +
Sbjct: 532 ISGLCRLDHVNEAYQAFVEMTGRGFVPNNITYNSLISAFCRVGYVSEALKLEKKMRQSGL 591
Query: 62 SPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPE--------------EELCSSLI 107
PD T +ILI FCKE + + +DM+ G P+ +++ S++I
Sbjct: 592 IPDVFTSNILIDGFCKEGRLDMMNKRFLDMYNSGLTPDVVTYNTIINAYCGAQDMSSAMI 651
Query: 108 FHLGKMRA 115
F + KM A
Sbjct: 652 F-MNKMLA 658
Score = 42.7 bits (99), Expect = 0.048, Method: Composition-based stats.
Identities = 27/107 (25%), Positives = 46/107 (42%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I FC+ G + + D DVV N+++ AYC DM S M M K+
Sbjct: 601 LIDGFCKEGRLDMMNKRFLDMYNSGLTPDVVTYNTIINAYCGAQDMSSAMIFMNKMLADG 660
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLI 107
PD T++I + C + A + + ++ G P ++L+
Sbjct: 661 CEPDIFTYNIWMHSLCNNHLLNRAVKMLDELVAMGCMPNSVTYNTLM 707
Score = 40.4 bits (93), Expect = 0.22, Method: Composition-based stats.
Identities = 24/91 (26%), Positives = 43/91 (47%)
Query: 39 AYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQP 98
+Y R+G++E + + ++ + PD+ F I C+ AY+ V+M +G P
Sbjct: 499 SYFRSGNVEGALKCWDDMVKVGVQPDFIAFSAYISGLCRLDHVNEAYQAFVEMTGRGFVP 558
Query: 99 EEELCSSLIFHLGKMRAHSEALSVYNMLRYS 129
+SLI ++ SEAL + +R S
Sbjct: 559 NNITYNSLISAFCRVGYVSEALKLEKKMRQS 589
Score = 37.7 bits (86), Expect = 1.7, Method: Composition-based stats.
Identities = 24/99 (24%), Positives = 43/99 (43%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+ISAFCR G E +L DV N ++ +C+ G ++ + +
Sbjct: 566 LISAFCRVGYVSEALKLEKKMRQSGLIPDVFTSNILIDGFCKEGRLDMMNKRFLDMYNSG 625
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPE 99
++PD T++ +I +C + A M M G +P+
Sbjct: 626 LTPDVVTYNTIINAYCGAQDMSSAMIFMNKMLADGCEPD 664
>gi|357499275|ref|XP_003619926.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355494941|gb|AES76144.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 727
Score = 48.9 bits (115), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 30/126 (23%), Positives = 55/126 (43%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ +C G + ++L K DV N + YC+ G + + V ++
Sbjct: 296 LMGGYCLKGNVDMARELFDAIGEWGFKRDVWTYNVFIHGYCKVGRVRDAVRVFDEMCREG 355
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ P+ T++ LI CK A+ + MHR G P+ C L+ L K + +A+
Sbjct: 356 VVPNIVTYNSLIDCLCKAGEVSGAWEIVKTMHRSGLTPDIVTCCILLDGLCKSKRLDQAI 415
Query: 121 SVYNML 126
++N L
Sbjct: 416 LLFNQL 421
Score = 42.7 bits (99), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 27/122 (22%), Positives = 54/122 (44%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C++G E +++ + + + ++V +++ YC G+++ + + E
Sbjct: 261 LIDGLCKNGMLVEAREMFDEMVNRGYEPNIVTCTALMGGYCLKGNVDMARELFDAIGEWG 320
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
D T+++ I +CK A R +M R+G P +SLI L K S A
Sbjct: 321 FKRDVWTYNVFIHGYCKVGRVRDAVRVFDEMCREGVVPNIVTYNSLIDCLCKAGEVSGAW 380
Query: 121 SV 122
+
Sbjct: 381 EI 382
Score = 37.0 bits (84), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 28/126 (22%), Positives = 53/126 (42%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ C+S ++ L DV ++ C + M M+++R +
Sbjct: 401 LLDGLCKSKRLDQAILLFNQLVESGLTPDVWSYTILIHGCCTSRRMGEAMNLLRDMHLKN 460
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ P T+ LI C+ A+R + +MH KG P+ S L+ L K + EA+
Sbjct: 461 LVPHIVTYSCLIDGLCRSGRISNAWRLLNEMHVKGPLPDTITYSILLDALWKKQHLDEAV 520
Query: 121 SVYNML 126
++N +
Sbjct: 521 FLFNQM 526
Score = 36.2 bits (82), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 26/127 (20%), Positives = 53/127 (41%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I CRSG +L + K D + + +L A + ++ + + ++ +
Sbjct: 471 LIDGLCRSGRISNAWRLLNEMHVKGPLPDTITYSILLDALWKKQHLDEAVFLFNQMIKRG 530
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ PD + I+I +CK + A +MH K P+ + L + K ++S
Sbjct: 531 LEPDVMCYTIMIDGYCKSERIDEAINLFREMHMKNLVPDIVTYTILFNAVFKSGSNSYEW 590
Query: 121 SVYNMLR 127
N++R
Sbjct: 591 KFVNVIR 597
>gi|240255563|ref|NP_190542.4| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|218546755|sp|P0C8A0.1|PP275_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g49730
gi|332645062|gb|AEE78583.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 638
Score = 48.9 bits (115), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 33/131 (25%), Positives = 59/131 (45%), Gaps = 3/131 (2%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ A C++G +E ++ D K+ ++ S+L +CR G + V+ ++ E
Sbjct: 208 LLDALCKNGSVKEASKVFEDMREKFPP-NLRYFTSLLYGWCREGKLMEAKEVLVQMKEAG 266
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAH-SEA 119
+ PD F L+ + AY M DM ++G +P + LI L + EA
Sbjct: 267 LEPDIVVFTNLLSGYAHAGKMADAYDLMNDMRKRGFEPNVNCYTVLIQALCRTEKRMDEA 326
Query: 120 LSVY-NMLRYS 129
+ V+ M RY
Sbjct: 327 MRVFVEMERYG 337
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/128 (24%), Positives = 58/128 (45%), Gaps = 1/128 (0%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ +CR G E K++ + + D+V+ ++L Y G M +M + +
Sbjct: 242 LLYGWCREGKLMEAKEVLVQMKEAGLEPDIVVFTNLLSGYAHAGKMADAYDLMNDMRKRG 301
Query: 61 ISPDYNTFHILIKYFCK-EKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEA 119
P+ N + +LI+ C+ EK A R V+M R G + + ++LI K +
Sbjct: 302 FEPNVNCYTVLIQALCRTEKRMDEAMRVFVEMERYGCEADIVTYTALISGFCKWGMIDKG 361
Query: 120 LSVYNMLR 127
SV + +R
Sbjct: 362 YSVLDDMR 369
Score = 40.4 bits (93), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 26/101 (25%), Positives = 44/101 (43%), Gaps = 1/101 (0%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGD-MESVMHVMRKLDEL 59
++S + +G + L D + + +V ++ A CRT M+ M V +++
Sbjct: 277 LLSGYAHAGKMADAYDLMNDMRKRGFEPNVNCYTVLIQALCRTEKRMDEAMRVFVEMERY 336
Query: 60 AISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEE 100
D T+ LI FCK M Y + DM +KG P +
Sbjct: 337 GCEADIVTYTALISGFCKWGMIDKGYSVLDDMRKKGVMPSQ 377
>gi|152717462|dbj|BAF73723.1| pentatricopeptide repeat protein [Raphanus sativus]
Length = 687
Score = 48.9 bits (115), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 29/107 (27%), Positives = 51/107 (47%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I + C+ G + + L + + K D+ NSM+ +C +G +++++ E
Sbjct: 261 IIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERK 320
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLI 107
ISPD T++ LI F KE + A +M +G P SS+I
Sbjct: 321 ISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMI 367
Score = 40.4 bits (93), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 43/99 (43%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
MI FC SG + + +QL + + DVV N+++ A+ + G + ++
Sbjct: 296 MIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRG 355
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPE 99
I P+ T+ +I FCK+ A M KG P
Sbjct: 356 IIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPN 394
Score = 38.5 bits (88), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 33/156 (21%), Positives = 67/156 (42%), Gaps = 9/156 (5%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
MI FC+ + + + K +++ N+++ YC ++ M ++ ++ E
Sbjct: 366 MIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETG 425
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ D T++ LI F A + +M G P+ C +L+ L +AL
Sbjct: 426 LVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDAL 485
Query: 121 SVYNMLRYSKRSMCKALHE--------KILHILISG 148
++ +++ SK+ + A H + +ILISG
Sbjct: 486 EMFKVMQKSKKDL-DASHPFNGVEPDVQTYNILISG 520
Score = 37.4 bits (85), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 22/100 (22%), Positives = 45/100 (45%), Gaps = 1/100 (1%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+++ CR G E L + + +++ C+ GD S + ++RK++E++
Sbjct: 190 LMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKIGDTVSALDLLRKMEEIS 249
Query: 61 -ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPE 99
I P+ + +I CK+ + A +M KG P+
Sbjct: 250 HIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPD 289
Score = 36.6 bits (83), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 19/79 (24%), Positives = 40/79 (50%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+AF + G F E ++L + + + + +SM+ +C+ +++ H+ +
Sbjct: 331 LINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKG 390
Query: 61 ISPDYNTFHILIKYFCKEK 79
SP+ TF+ LI +C K
Sbjct: 391 CSPNLITFNTLIDGYCGAK 409
Score = 35.8 bits (81), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 33/129 (25%), Positives = 53/129 (41%), Gaps = 21/129 (16%)
Query: 17 LAGDFEAKYDKY----------DVVLLNSMLCAYCRTGDMESVMH---VMRK----LDEL 59
L GD A D D+V +++L C G ++ + VM+K LD
Sbjct: 442 LVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDAS 501
Query: 60 ----AISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRA 115
+ PD T++ILI E ++ A +M +G P+ SS+I L K
Sbjct: 502 HPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSR 561
Query: 116 HSEALSVYN 124
EA +++
Sbjct: 562 LDEATQMFD 570
>gi|449448914|ref|XP_004142210.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
chloroplastic-like [Cucumis sativus]
gi|449525343|ref|XP_004169677.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
chloroplastic-like [Cucumis sativus]
Length = 768
Score = 48.9 bits (115), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 40/148 (27%), Positives = 68/148 (45%), Gaps = 4/148 (2%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+IS C+ G EE ++ ++ + V N+++ + C+ ++ + R L
Sbjct: 349 LISGLCKLGEIEEAVKILDQMVSRDCSPNAVTYNAIISSLCKENRVDEATEIARLLTSKG 408
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
I PD TF+ LI+ C + A +M KG +P+E + LI L R EAL
Sbjct: 409 ILPDVCTFNSLIQGLCLSSNHKSAMDLFEEMKGKGCRPDEFTYNMLIDSLCSSRKLEEAL 468
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISG 148
N+L+ + + C A + I + LI G
Sbjct: 469 ---NLLKEMELNGC-ARNVVIYNTLIDG 492
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 44/95 (46%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C+S E+ QL + + D NS+L +C+TGD++ +++ +
Sbjct: 524 LIDGLCKSKRVEDAAQLMDQMIMEGLRPDKFTYNSLLTHFCKTGDIKKAADIVQTMTSSG 583
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKG 95
+PD T+ LI CK +A R + + KG
Sbjct: 584 CNPDIVTYATLISGLCKAGRVQVASRLLRSIQMKG 618
Score = 45.8 bits (107), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 31/129 (24%), Positives = 59/129 (45%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I + C S EE L + E +VV+ N+++ +C+ +E + +++
Sbjct: 454 LIDSLCSSRKLEEALNLLKEMELNGCARNVVIYNTLIDGFCKNKRIEEAEEIFDEMELQG 513
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+S D T++ LI CK K A + M M +G +P++ +SL+ H K +A
Sbjct: 514 VSRDSVTYNTLIDGLCKSKRVEDAAQLMDQMIMEGLRPDKFTYNSLLTHFCKTGDIKKAA 573
Query: 121 SVYNMLRYS 129
+ + S
Sbjct: 574 DIVQTMTSS 582
Score = 44.7 bits (104), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 30/128 (23%), Positives = 59/128 (46%), Gaps = 3/128 (2%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I FC++ EE +++ + E + D V N+++ C++ +E +M ++
Sbjct: 489 LIDGFCKNKRIEEAEEIFDEMELQGVSRDSVTYNTLIDGLCKSKRVEDAAQLMDQMIMEG 548
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHL---GKMRAHS 117
+ PD T++ L+ +FCK A + M G P+ ++LI L G+++ S
Sbjct: 549 LRPDKFTYNSLLTHFCKTGDIKKAADIVQTMTSSGCNPDIVTYATLISGLCKAGRVQVAS 608
Query: 118 EALSVYNM 125
L M
Sbjct: 609 RLLRSIQM 616
Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 32/154 (20%), Positives = 66/154 (42%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+IS+ C+ +E ++A +K DV NS++ C + + +S M + ++
Sbjct: 384 IISSLCKENRVDEATEIARLLTSKGILPDVCTFNSLIQGLCLSSNHKSAMDLFEEMKGKG 443
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
PD T+++LI C + A + +M G + ++LI K + EA
Sbjct: 444 CRPDEFTYNMLIDSLCSSRKLEEALNLLKEMELNGCARNVVIYNTLIDGFCKNKRIEEAE 503
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLKDA 154
+++ + S + ++ L K ++DA
Sbjct: 504 EIFDEMELQGVSRDSVTYNTLIDGLCKSKRVEDA 537
Score = 36.2 bits (82), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 26/126 (20%), Positives = 53/126 (42%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ FC+ G ++ + ++ + D N+++ C+ G + M V+ +
Sbjct: 279 LINGFCKQGRIDQALSFIQEAVSEGFRPDQFTYNTLVNGLCKIGHAKHAMEVVDAMLLGG 338
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ PD T++ LI CK A + + M + P +++I L K EA
Sbjct: 339 LDPDIYTYNSLISGLCKLGEIEEAVKILDQMVSRDCSPNAVTYNAIISSLCKENRVDEAT 398
Query: 121 SVYNML 126
+ +L
Sbjct: 399 EIARLL 404
>gi|30840327|emb|CAD61286.1| fertility restorer homologue [Raphanus sativus]
gi|134302843|gb|ABO70665.1| restorer-of-fertility [Raphanus sativus]
gi|157931526|gb|ABW04887.1| PPR [Raphanus sativus]
gi|194295008|gb|ABO70666.2| restorer-of-fertility [Raphanus sativus]
Length = 687
Score = 48.9 bits (115), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 29/107 (27%), Positives = 51/107 (47%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I + C+ G + + L + + K D+ NSM+ +C +G +++++ E
Sbjct: 261 IIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERK 320
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLI 107
ISPD T++ LI F KE + A +M +G P SS+I
Sbjct: 321 ISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMI 367
Score = 40.4 bits (93), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 43/99 (43%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
MI FC SG + + +QL + + DVV N+++ A+ + G + ++
Sbjct: 296 MIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRG 355
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPE 99
I P+ T+ +I FCK+ A M KG P
Sbjct: 356 IIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPN 394
Score = 38.1 bits (87), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 33/156 (21%), Positives = 67/156 (42%), Gaps = 9/156 (5%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
MI FC+ + + + K +++ N+++ YC ++ M ++ ++ E
Sbjct: 366 MIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETG 425
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ D T++ LI F A + +M G P+ C +L+ L +AL
Sbjct: 426 LVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDAL 485
Query: 121 SVYNMLRYSKRSMCKALHE--------KILHILISG 148
++ +++ SK+ + A H + +ILISG
Sbjct: 486 EMFKVMQKSKKDL-DASHPFNGVEPDVQTYNILISG 520
Score = 37.7 bits (86), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 22/100 (22%), Positives = 46/100 (46%), Gaps = 1/100 (1%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+++ CR G E L + + +++ C+ GD S ++++RK++E++
Sbjct: 190 LMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSALNLLRKMEEVS 249
Query: 61 -ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPE 99
I P+ + +I CK+ + A +M KG P+
Sbjct: 250 HIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPD 289
Score = 36.6 bits (83), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 23/99 (23%), Positives = 44/99 (44%), Gaps = 3/99 (3%)
Query: 29 DVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYMLAYRTM 88
DVV N++L C + +++ ++ E P+ TF L+ C+E + A +
Sbjct: 148 DVVTFNTLLHGLCVEDRVSEALNLFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALL 207
Query: 89 VDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVYNMLR 127
M G QP + +++ + K + +S N+LR
Sbjct: 208 DRMMEDGLQPTQITYGTIVDGMCK---KGDTVSALNLLR 243
Score = 36.6 bits (83), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 19/79 (24%), Positives = 40/79 (50%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+AF + G F E ++L + + + + +SM+ +C+ +++ H+ +
Sbjct: 331 LINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKG 390
Query: 61 ISPDYNTFHILIKYFCKEK 79
SP+ TF+ LI +C K
Sbjct: 391 CSPNLITFNTLIDGYCGAK 409
Score = 35.8 bits (81), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 33/129 (25%), Positives = 53/129 (41%), Gaps = 21/129 (16%)
Query: 17 LAGDFEAKYDKY----------DVVLLNSMLCAYCRTGDMESVMH---VMRK----LDEL 59
L GD A D D+V +++L C G ++ + VM+K LD
Sbjct: 442 LVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDAS 501
Query: 60 ----AISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRA 115
+ PD T++ILI E ++ A +M +G P+ SS+I L K
Sbjct: 502 HPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSR 561
Query: 116 HSEALSVYN 124
EA +++
Sbjct: 562 LDEATQMFD 570
>gi|255584017|ref|XP_002532754.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223527505|gb|EEF29631.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 721
Score = 48.9 bits (115), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 27/130 (20%), Positives = 59/130 (45%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I +FCR G + ++ V NS++ YC+ G+ + + ++ +
Sbjct: 233 LIDSFCRRGEMDNAIGFLDKMTKASIEFTVYPYNSLINGYCKLGNASAAKYYFDEMIDKG 292
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
++P T+ LI +C E + A++ +M KG P +++I L + +EA+
Sbjct: 293 LTPTVVTYTSLISGYCNEGEWHKAFKVYNEMTAKGISPNTYTFTAIISGLCRANMMAEAI 352
Query: 121 SVYNMLRYSK 130
++ ++ K
Sbjct: 353 RLFGEMKERK 362
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 28/109 (25%), Positives = 48/109 (44%), Gaps = 1/109 (0%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+IS CR+ E +L G+ + + V N M+ +CR+G++ H++ ++
Sbjct: 338 IISGLCRANMMAEAIRLFGEMKERKIMPSEVTYNVMIEGHCRSGNISEAFHLLDEMVGKG 397
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFH 109
PD T+ LI C A + D+H K H +C S + H
Sbjct: 398 FVPDTYTYRPLISGLCSVGRVSEAKEFVDDLH-KDHHKLNNMCYSALVH 445
Score = 43.5 bits (101), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 26/126 (20%), Positives = 57/126 (45%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+IS C G E K+ D + K + + ++++ YC+ G + + R + E
Sbjct: 408 LISGLCSVGRVSEAKEFVDDLHKDHHKLNNMCYSALVHGYCKEGRFKDAVSACRVMVERG 467
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
++ D + ILI +E + + +MH G +P+ + +++I K EA
Sbjct: 468 VAMDLVCYAILIDGTAREHDTRALFGLLKEMHNHGLRPDAVIYTNMIDRHSKAGNLKEAF 527
Query: 121 SVYNML 126
+++++
Sbjct: 528 GLWDIM 533
Score = 42.0 bits (97), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 25/100 (25%), Positives = 40/100 (40%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ +C+ G K + K VV S++ YC G+ V ++
Sbjct: 268 LINGYCKLGNASAAKYYFDEMIDKGLTPTVVTYTSLISGYCNEGEWHKAFKVYNEMTAKG 327
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEE 100
ISP+ TF +I C+ M A R +M + P E
Sbjct: 328 ISPNTYTFTAIISGLCRANMMAEAIRLFGEMKERKIMPSE 367
Score = 40.0 bits (92), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 26/119 (21%), Positives = 52/119 (43%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+IS +C G + + ++ + AK + +++ CR M + + ++ E
Sbjct: 303 LISGYCNEGEWHKAFKVYNEMTAKGISPNTYTFTAIISGLCRANMMAEAIRLFGEMKERK 362
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEA 119
I P T++++I+ C+ A+ + +M KG P+ LI L + SEA
Sbjct: 363 IMPSEVTYNVMIEGHCRSGNISEAFHLLDEMVGKGFVPDTYTYRPLISGLCSVGRVSEA 421
>gi|224107983|ref|XP_002314677.1| predicted protein [Populus trichocarpa]
gi|222863717|gb|EEF00848.1| predicted protein [Populus trichocarpa]
Length = 481
Score = 48.9 bits (115), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 33/128 (25%), Positives = 60/128 (46%), Gaps = 6/128 (4%)
Query: 33 LNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYMLAYRTMVDMH 92
N ++ YC ++ M ++++ PD +++ IK +CK+K + + +M
Sbjct: 206 FNILIHGYCEARMLDDARKTMEEMEKHGFRPDASSYTCFIKAYCKQKDFRNVEVILNEMG 265
Query: 93 RKGHQPEEELCSSLIFHLGKMRAHSEALSVYNMLRYSKRSMCKA---LHEKILHILISGK 149
KG +P+ S I LGK R +EAL VY + ++ CK ++++L
Sbjct: 266 EKGCEPDVIAYSIYIRALGKARKINEALEVYEKMN---KNSCKPDAKFFSTLIYVLGRSG 322
Query: 150 LLKDAYIV 157
L DA+ V
Sbjct: 323 RLNDAWYV 330
Score = 41.2 bits (95), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 25/123 (20%), Positives = 55/123 (44%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I +C + ++ ++ + E + D + AYC+ D +V ++ ++ E
Sbjct: 209 LIHGYCEARMLDDARKTMEEMEKHGFRPDASSYTCFIKAYCKQKDFRNVEVILNEMGEKG 268
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
PD + I I+ K + A M++ +P+ + S+LI+ LG+ ++A
Sbjct: 269 CEPDVIAYSIYIRALGKARKINEALEVYEKMNKNSCKPDAKFFSTLIYVLGRSGRLNDAW 328
Query: 121 SVY 123
V+
Sbjct: 329 YVF 331
>gi|134302847|gb|ABO70667.1| restorer-of-fertility [Raphanus sativus]
Length = 687
Score = 48.9 bits (115), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 29/107 (27%), Positives = 51/107 (47%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I + C+ G + + L + + K D+ NSM+ +C +G +++++ E
Sbjct: 261 IIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERK 320
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLI 107
ISPD T++ LI F KE + A +M +G P SS+I
Sbjct: 321 ISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMI 367
Score = 40.4 bits (93), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 43/99 (43%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
MI FC SG + + +QL + + DVV N+++ A+ + G + ++
Sbjct: 296 MIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRG 355
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPE 99
I P+ T+ +I FCK+ A M KG P
Sbjct: 356 IIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPN 394
Score = 38.1 bits (87), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 33/156 (21%), Positives = 67/156 (42%), Gaps = 9/156 (5%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
MI FC+ + + + K +++ N+++ YC ++ M ++ ++ E
Sbjct: 366 MIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETG 425
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ D T++ LI F A + +M G P+ C +L+ L +AL
Sbjct: 426 LVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDAL 485
Query: 121 SVYNMLRYSKRSMCKALHE--------KILHILISG 148
++ +++ SK+ + A H + +ILISG
Sbjct: 486 EMFKVMQKSKKDL-DASHPFNGVEPDVQTYNILISG 520
Score = 37.7 bits (86), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 22/100 (22%), Positives = 46/100 (46%), Gaps = 1/100 (1%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+++ CR G E L + + +++ C+ GD S ++++RK++E++
Sbjct: 190 LMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSALNLLRKMEEVS 249
Query: 61 -ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPE 99
I P+ + +I CK+ + A +M KG P+
Sbjct: 250 HIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPD 289
Score = 36.6 bits (83), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 19/79 (24%), Positives = 40/79 (50%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+AF + G F E ++L + + + + +SM+ +C+ +++ H+ +
Sbjct: 331 LINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKG 390
Query: 61 ISPDYNTFHILIKYFCKEK 79
SP+ TF+ LI +C K
Sbjct: 391 CSPNLITFNTLIDGYCGAK 409
Score = 35.8 bits (81), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 33/129 (25%), Positives = 53/129 (41%), Gaps = 21/129 (16%)
Query: 17 LAGDFEAKYDKY----------DVVLLNSMLCAYCRTGDMESVMH---VMRK----LDEL 59
L GD A D D+V +++L C G ++ + VM+K LD
Sbjct: 442 LVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDAS 501
Query: 60 ----AISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRA 115
+ PD T++ILI E ++ A +M +G P+ SS+I L K
Sbjct: 502 HPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSR 561
Query: 116 HSEALSVYN 124
EA +++
Sbjct: 562 LDEATQMFD 570
>gi|30840221|emb|CAD61285.1| fertility restorer [Raphanus sativus]
gi|32452380|emb|CAD80165.1| restorer of fertility pentatricopeptide repeat [Raphanus sativus]
gi|32527602|gb|AAP86198.1| pentatricopeptide repeat-containing protein [Raphanus sativus]
gi|90903522|gb|ABE02309.1| Rf [Raphanus sativus]
gi|90903524|gb|ABE02310.1| Rf [Raphanus sativus]
gi|157931524|gb|ABW04886.1| PPR [Raphanus sativus]
Length = 687
Score = 48.9 bits (115), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 29/107 (27%), Positives = 51/107 (47%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I + C+ G + + L + + K D+ NSM+ +C +G +++++ E
Sbjct: 261 IIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERK 320
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLI 107
ISPD T++ LI F KE + A +M +G P SS+I
Sbjct: 321 ISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMI 367
Score = 40.4 bits (93), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 43/99 (43%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
MI FC SG + + +QL + + DVV N+++ A+ + G + ++
Sbjct: 296 MIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRG 355
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPE 99
I P+ T+ +I FCK+ A M KG P
Sbjct: 356 IIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPN 394
Score = 38.5 bits (88), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 33/156 (21%), Positives = 67/156 (42%), Gaps = 9/156 (5%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
MI FC+ + + + K +++ N+++ YC ++ M ++ ++ E
Sbjct: 366 MIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETG 425
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ D T++ LI F A + +M G P+ C +L+ L +AL
Sbjct: 426 LVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDAL 485
Query: 121 SVYNMLRYSKRSMCKALHE--------KILHILISG 148
++ +++ SK+ + A H + +ILISG
Sbjct: 486 EMFKVMQKSKKDL-DASHPFNGVEPDVQTYNILISG 520
Score = 37.7 bits (86), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 22/100 (22%), Positives = 46/100 (46%), Gaps = 1/100 (1%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+++ CR G E L + + +++ C+ GD S ++++RK++E++
Sbjct: 190 LMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSALNLLRKMEEVS 249
Query: 61 -ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPE 99
I P+ + +I CK+ + A +M KG P+
Sbjct: 250 HIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPD 289
Score = 36.6 bits (83), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 19/79 (24%), Positives = 40/79 (50%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+AF + G F E ++L + + + + +SM+ +C+ +++ H+ +
Sbjct: 331 LINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKG 390
Query: 61 ISPDYNTFHILIKYFCKEK 79
SP+ TF+ LI +C K
Sbjct: 391 CSPNLITFNTLIDGYCGAK 409
Score = 35.8 bits (81), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 33/129 (25%), Positives = 53/129 (41%), Gaps = 21/129 (16%)
Query: 17 LAGDFEAKYDKY----------DVVLLNSMLCAYCRTGDMESVMH---VMRK----LDEL 59
L GD A D D+V +++L C G ++ + VM+K LD
Sbjct: 442 LVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDAS 501
Query: 60 ----AISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRA 115
+ PD T++ILI E ++ A +M +G P+ SS+I L K
Sbjct: 502 HPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSR 561
Query: 116 HSEALSVYN 124
EA +++
Sbjct: 562 LDEATQMFD 570
>gi|152717466|dbj|BAF73724.1| pentatricopeptide repeat protein [Raphanus sativus]
Length = 687
Score = 48.9 bits (115), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 29/107 (27%), Positives = 51/107 (47%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I + C+ G + + L + + K D+ NSM+ +C +G +++++ E
Sbjct: 261 IIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERK 320
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLI 107
ISPD T++ LI F KE + A +M +G P SS+I
Sbjct: 321 ISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMI 367
Score = 40.4 bits (93), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 43/99 (43%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
MI FC SG + + +QL + + DVV N+++ A+ + G + ++
Sbjct: 296 MIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRG 355
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPE 99
I P+ T+ +I FCK+ A M KG P
Sbjct: 356 IIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPN 394
Score = 38.1 bits (87), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 33/156 (21%), Positives = 67/156 (42%), Gaps = 9/156 (5%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
MI FC+ + + + K +++ N+++ YC ++ M ++ ++ E
Sbjct: 366 MIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETG 425
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ D T++ LI F A + +M G P+ C +L+ L +AL
Sbjct: 426 LVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDAL 485
Query: 121 SVYNMLRYSKRSMCKALHE--------KILHILISG 148
++ +++ SK+ + A H + +ILISG
Sbjct: 486 EMFKVMQKSKKDL-DASHPFNGVEPDVQTYNILISG 520
Score = 37.7 bits (86), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 22/100 (22%), Positives = 46/100 (46%), Gaps = 1/100 (1%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+++ CR G E L + + +++ C+ GD S ++++RK++E++
Sbjct: 190 LMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSALNLLRKMEEVS 249
Query: 61 -ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPE 99
I P+ + +I CK+ + A +M KG P+
Sbjct: 250 HIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPD 289
Score = 36.6 bits (83), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 23/99 (23%), Positives = 44/99 (44%), Gaps = 3/99 (3%)
Query: 29 DVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYMLAYRTM 88
DVV N++L C + +++ ++ E P+ TF L+ C+E + A +
Sbjct: 148 DVVTFNTLLHGLCVEDRVSEALNLFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALL 207
Query: 89 VDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVYNMLR 127
M G QP + +++ + K + +S N+LR
Sbjct: 208 DRMMEDGLQPTQITYGTIVDGMCK---KGDTVSALNLLR 243
Score = 36.6 bits (83), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 19/79 (24%), Positives = 40/79 (50%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+AF + G F E ++L + + + + +SM+ +C+ +++ H+ +
Sbjct: 331 LINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKG 390
Query: 61 ISPDYNTFHILIKYFCKEK 79
SP+ TF+ LI +C K
Sbjct: 391 CSPNLITFNTLIDGYCGAK 409
Score = 35.8 bits (81), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 33/129 (25%), Positives = 53/129 (41%), Gaps = 21/129 (16%)
Query: 17 LAGDFEAKYDKY----------DVVLLNSMLCAYCRTGDMESVMH---VMRK----LDEL 59
L GD A D D+V +++L C G ++ + VM+K LD
Sbjct: 442 LVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDAS 501
Query: 60 ----AISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRA 115
+ PD T++ILI E ++ A +M +G P+ SS+I L K
Sbjct: 502 HPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSR 561
Query: 116 HSEALSVYN 124
EA +++
Sbjct: 562 LDEATQMFD 570
>gi|15221081|ref|NP_172636.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75200496|sp|Q9SAA6.1|PPR34_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g11710, mitochondrial; Flags: Precursor
gi|4835786|gb|AAD30252.1|AC007296_13 F25C20.14 [Arabidopsis thaliana]
gi|22655109|gb|AAM98145.1| putative salt-inducible protein [Arabidopsis thaliana]
gi|30725498|gb|AAP37771.1| At1g11710 [Arabidopsis thaliana]
gi|332190652|gb|AEE28773.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 657
Score = 48.9 bits (115), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 48/95 (50%), Gaps = 3/95 (3%)
Query: 29 DVVLLNSMLCAYCRTGDMESVMHVMRKLDELA---ISPDYNTFHILIKYFCKEKMYMLAY 85
+VV N M+ C+TGDM + ++ K+ ++ +SP+ T++ +I FCK LA
Sbjct: 252 NVVSFNMMIDGACKTGDMRFALQLLGKMGMMSGNFVSPNAVTYNSVINGFCKAGRLDLAE 311
Query: 86 RTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
R DM + G E +L+ G+ + EAL
Sbjct: 312 RIRGDMVKSGVDCNERTYGALVDAYGRAGSSDEAL 346
Score = 37.7 bits (86), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 29/117 (24%), Positives = 55/117 (47%), Gaps = 5/117 (4%)
Query: 15 KQLAGDFEAKYDKY---DVVLLNSMLCAYCRTGDMESVMHVMRKLD--ELAISPDYNTFH 69
+ +AG EA + D+V N++L +TG++E ++ K+ + S TF+
Sbjct: 514 RGMAGAAEAVVNAMEIKDIVTYNTLLNESLKTGNVEEADDILSKMQKQDGEKSVSLVTFN 573
Query: 70 ILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVYNML 126
I+I + CK Y A + M +G P+ +LI K R+ + + +++ L
Sbjct: 574 IMINHLCKFGSYEKAKEVLKFMVERGVVPDSITYGTLITSFSKHRSQEKVVELHDYL 630
Score = 36.6 bits (83), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 19/78 (24%), Positives = 40/78 (51%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ A+ R+G +E +L + +K + V+ NS++ GD+E M V+R ++
Sbjct: 332 LVDAYGRAGSSDEALRLCDEMTSKGLVVNTVIYNSIVYWLFMEGDIEGAMSVLRDMNSKN 391
Query: 61 ISPDYNTFHILIKYFCKE 78
+ D T I+++ C+
Sbjct: 392 MQIDRFTQAIVVRGLCRN 409
>gi|359476071|ref|XP_003631786.1| PREDICTED: pentatricopeptide repeat-containing protein At1g12300,
mitochondrial-like [Vitis vinifera]
Length = 629
Score = 48.9 bits (115), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 42/170 (24%), Positives = 74/170 (43%), Gaps = 16/170 (9%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+++ FCR +E QL FE + DVV N++L A C+ G+ + V+ +++
Sbjct: 331 ILNGFCRENHIDEALQLFDHFEWANNSPDVVSFNTILSAACKQGNSSMIRRVLYRMEYEG 390
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPE--------EELCSS------- 105
+ + + LI+YFC + M R G P ++LC +
Sbjct: 391 VKLNVVSSTCLIQYFCAIGKISECLELLESMIRNGLNPTVVTFNMLLDKLCKNGLLGTAH 450
Query: 106 LIFHLGKMRAHSEALSVYNMLRY-SKRSMCKALHEKILHILISGKLLKDA 154
IF + + + YN+L + S R +L E++L + S +L DA
Sbjct: 451 RIFREFRNTGYFPNTTSYNILIHASIREGNDSLVEQLLRDMYSWRLKPDA 500
>gi|326505288|dbj|BAK03031.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326529675|dbj|BAK04784.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 597
Score = 48.9 bits (115), Expect = 6e-04, Method: Composition-based stats.
Identities = 33/154 (21%), Positives = 66/154 (42%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C+ G +E QL D A + D V +++ YCR GD+ M++ ++
Sbjct: 255 VIHGMCKEGRMKEASQLHRDMVAAGIEPDTVTYTTLVDGYCRAGDVGEAMNLRAVMEARG 314
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ P T++ +I+ C++ + +M + Q + C++LI K A
Sbjct: 315 MLPGVATYNAIIRKLCEDGKMKEVNGLLSEMDERKVQADHVTCNTLINSYSKKGDMPSAC 374
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLKDA 154
V + S + + ++ ++H K L +A
Sbjct: 375 KVKTRMMESGLQLDQFTYKALIHGFSKAKQLDEA 408
>gi|297839881|ref|XP_002887822.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297333663|gb|EFH64081.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 407
Score = 48.9 bits (115), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 35/128 (27%), Positives = 65/128 (50%), Gaps = 4/128 (3%)
Query: 6 CRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDY 65
C+SG + +L + +++ K DVV N+++ A + +E + V R++ E P+
Sbjct: 195 CKSGKPWKAVKLYKEMKSRRIKLDVVAYNTVIRAIGASQGVEFGIRVFREMRERGCEPNV 254
Query: 66 NTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVYN- 124
T + +IK C++ AYR + +M +KG QP+ S + ++ SE LS++
Sbjct: 255 ATHNTIIKLLCEDGRMRDAYRMLDEMPKKGCQPD---SISYMCLFSRLEKPSEILSLFGR 311
Query: 125 MLRYSKRS 132
M+R R
Sbjct: 312 MIRSGVRP 319
>gi|356495741|ref|XP_003516732.1| PREDICTED: pentatricopeptide repeat-containing protein At1g52640,
mitochondrial-like [Glycine max]
Length = 523
Score = 48.9 bits (115), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 25/99 (25%), Positives = 51/99 (51%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ A C+ G +E K + D +K + D + + +YC D++S V+ K+
Sbjct: 257 LLQALCKGGRVDEAKNIFHDMLSKRVEPDAFTYSIFIHSYCDADDVQSAFRVLDKMRRYN 316
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPE 99
+ P+ T++ +IK CK + AY+ + +M +G +P+
Sbjct: 317 LLPNVFTYNCIIKQLCKNEHVEEAYQLLDEMISRGVKPD 355
>gi|297832604|ref|XP_002884184.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297330024|gb|EFH60443.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 829
Score = 48.9 bits (115), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 23/98 (23%), Positives = 51/98 (52%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
M+S F R+ +++ + + D+V NS++ Y R G+ +++ L++
Sbjct: 644 MLSIFTRNNMYDQAEGILQSIHEDGLNPDLVTYNSLMDMYVRRGECWKAEEILKTLEKSQ 703
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQP 98
+ PD +++ +IK FC++ + A R + +M +G +P
Sbjct: 704 LKPDLVSYNTVIKGFCRKGLMQEAVRMLSEMTERGIRP 741
Score = 36.6 bits (83), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 26/123 (21%), Positives = 54/123 (43%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++SA R G E K + ++ + V N++L + + G + V+++++E
Sbjct: 294 VLSACAREGLLREAKDFFAELKSCGYEPGTVTYNALLQVFGKAGVYTEALSVLKEMEENN 353
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
D T++ L+ + + A + M +KG P +++I GK EAL
Sbjct: 354 CPADSVTYNELVAAYARAGFSKEAAVVIEMMTQKGVMPNAITYTTVIDAYGKAGKEDEAL 413
Query: 121 SVY 123
++
Sbjct: 414 KLF 416
>gi|242070015|ref|XP_002450284.1| hypothetical protein SORBIDRAFT_05g003220 [Sorghum bicolor]
gi|241936127|gb|EES09272.1| hypothetical protein SORBIDRAFT_05g003220 [Sorghum bicolor]
Length = 727
Score = 48.9 bits (115), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 30/113 (26%), Positives = 52/113 (46%), Gaps = 5/113 (4%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
M++ +C++G +E L GD V+ N+++ YCR G +E + ++ E
Sbjct: 390 MLNGYCKAGNLKEALWLLGDLRRAGLAPTVLTYNTLIDGYCRLGGLEEARRLKEEMVEQG 449
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPE-----EELCSSLIF 108
PD T+ IL+ K + +A +M KG QP+ +C+ LI
Sbjct: 450 CFPDVCTYTILMNGSHKVRNLPMAREFFDEMLSKGLQPDCFAYNTRICAELIL 502
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/100 (26%), Positives = 47/100 (47%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I A C G E ++L + + VV ++ CR G++ S RK+ ++
Sbjct: 565 LIHAHCERGLLSEARKLLNGMVSDGLQPSVVTYTILIHTCCRRGNLYSAYGWFRKMLDVG 624
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEE 100
I P+ T+++LI C+ +LAY +M +G P +
Sbjct: 625 IEPNEITYNVLIHALCRTGRTLLAYHHFHEMLERGLAPNK 664
Score = 42.0 bits (97), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 33/123 (26%), Positives = 59/123 (47%), Gaps = 5/123 (4%)
Query: 29 DVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYMLAYRTM 88
D++ NSML YC+ G+++ + ++ L ++P T++ LI +C+ A R
Sbjct: 383 DLITYNSMLNGYCKAGNLKEALWLLGDLRRAGLAPTVLTYNTLIDGYCRLGGLEEARRLK 442
Query: 89 VDMHRKGHQPEEELCSSLIFHLG--KMRAHSEALSVYN-MLRYSKRSMCKALHEKILHIL 145
+M +G P ++C+ I G K+R A ++ ML + C A + +I L
Sbjct: 443 EEMVEQGCFP--DVCTYTILMNGSHKVRNLPMAREFFDEMLSKGLQPDCFAYNTRICAEL 500
Query: 146 ISG 148
I G
Sbjct: 501 ILG 503
Score = 39.7 bits (91), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 34/66 (51%)
Query: 34 NSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHR 93
N ++ A CRTG H ++ E ++P+ T+ +LI C+E + A R +MH+
Sbjct: 633 NVLIHALCRTGRTLLAYHHFHEMLERGLAPNKYTYTLLIDGNCREGNWADAIRLYFEMHQ 692
Query: 94 KGHQPE 99
G P+
Sbjct: 693 NGIPPD 698
>gi|356558657|ref|XP_003547620.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g55840-like [Glycine max]
Length = 1078
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 51/95 (53%)
Query: 35 SMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRK 94
+M+ C+ G +E + ++ + +++++PD TF +LI F + A M M++
Sbjct: 390 AMIDGLCKNGMLEEAVQLLDDMLKVSVNPDVVTFSVLINGFFRVGKINNAKEIMCKMYKT 449
Query: 95 GHQPEEELCSSLIFHLGKMRAHSEALSVYNMLRYS 129
G P L S+LI++ KM EAL+ Y ++ +S
Sbjct: 450 GLVPNGILYSTLIYNYCKMGYLKEALNAYAVMNHS 484
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 27/107 (25%), Positives = 46/107 (42%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
MI C++G EE QL D DVV + ++ + R G + + +M K+ +
Sbjct: 391 MIDGLCKNGMLEEAVQLLDDMLKVSVNPDVVTFSVLINGFFRVGKINNAKEIMCKMYKTG 450
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLI 107
+ P+ + LI +CK A M+ GH + C+ L+
Sbjct: 451 LVPNGILYSTLIYNYCKMGYLKEALNAYAVMNHSGHVADHFTCNVLV 497
Score = 44.3 bits (103), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 32/120 (26%), Positives = 61/120 (50%), Gaps = 4/120 (3%)
Query: 29 DVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYMLAYRTM 88
DV N +L A C G ++ ++RK++E + P T++ L+ ++CK+ Y A + +
Sbjct: 174 DVATFNILLNALCERGKFKNAGFLLRKMEESGVYPTAVTYNTLLNWYCKKGRYKAASQLI 233
Query: 89 VDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVYNMLRYSKRSMCKALHEKILHILISG 148
M KG ++C+ +F + + S + Y +L+ +R+M +E + LISG
Sbjct: 234 DCMASKG--IGVDVCTYNVF-IDNLCRDSRSAKGYLLLKRMRRNMVYP-NEITYNTLISG 289
Score = 37.7 bits (86), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 30/135 (22%), Positives = 57/135 (42%), Gaps = 6/135 (4%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+++A C G F+ L E V N++L YC+ G ++ ++ +
Sbjct: 181 LLNALCERGKFKNAGFLLRKMEESGVYPTAVTYNTLLNWYCKKGRYKAASQLIDCMASKG 240
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHL---GKMRAHS 117
I D T+++ I C++ Y + M R P E ++LI GK+ +
Sbjct: 241 IGVDVCTYNVFIDNLCRDSRSAKGYLLLKRMRRNMVYPNEITYNTLISGFVREGKIEVAT 300
Query: 118 EA---LSVYNMLRYS 129
+ +S++N+L S
Sbjct: 301 KVFDEMSLFNLLPNS 315
Score = 36.6 bits (83), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 23/120 (19%), Positives = 56/120 (46%), Gaps = 7/120 (5%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ +C+ + +L E + K DVV N ++ C GD+E+ + ++ +
Sbjct: 952 LMHVYCKEANVAKALELRSIMEHCHVKLDVVAYNVLISGLCANGDIEAAFKLYEEMKQRD 1011
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMH-RKGHQPEEELCSS------LIFHLGKM 113
+ P+ + + +LI FC + + + + D+ R+ + ++ C S ++ H+ K+
Sbjct: 1012 LWPNTSIYIVLIDSFCAGNYQIESEKLLRDIQDRELMRLNQQFCYSSRCDIAVVLHMNKI 1071
>gi|356541258|ref|XP_003539096.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At1g07740, mitochondrial-like [Glycine max]
Length = 256
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 33/134 (24%), Positives = 58/134 (43%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ C +EE K+L D K V ++ + G +E ++ ++ +
Sbjct: 77 LMEGLCSVEKYEEAKKLMFDMAYHGSKAQPVNFGVLMNDLGKRGKVEEAKALLHEMKKRX 136
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ PD T++ILI Y CKE M AY+ +++M G P ++ L ++ L
Sbjct: 137 LKPDIVTYNILINYLCKEGKAMEAYKVLLEMQIGGCVPNAATYRMVVDGLCQIGDFEVGL 196
Query: 121 SVYNMLRYSKRSMC 134
SV N + S C
Sbjct: 197 SVLNAMLTSXTINC 210
>gi|242054609|ref|XP_002456450.1| hypothetical protein SORBIDRAFT_03g036550 [Sorghum bicolor]
gi|241928425|gb|EES01570.1| hypothetical protein SORBIDRAFT_03g036550 [Sorghum bicolor]
Length = 669
Score = 48.9 bits (115), Expect = 7e-04, Method: Composition-based stats.
Identities = 30/127 (23%), Positives = 57/127 (44%), Gaps = 3/127 (2%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I CR G + ++ E DV N+++ YCR G +++ R + +
Sbjct: 82 LIRNLCRRGRTSDAARVLRAAEGSGSPVDVFAYNTLVAGYCRYGHLDAAR---RLIGSMP 138
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
++PD T+ LI+ C A + DM R+G QP + L+ + + +A+
Sbjct: 139 VAPDAYTYTPLIRVLCDRGRVADALSLLDDMLRRGCQPNVVTYTVLLEAMCRNSGFEQAM 198
Query: 121 SVYNMLR 127
+V + +R
Sbjct: 199 AVLDEMR 205
Score = 44.7 bits (104), Expect = 0.012, Method: Composition-based stats.
Identities = 25/107 (23%), Positives = 45/107 (42%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ A CR+ FE+ + + AK ++V N ++ CR G ++ ++ +L
Sbjct: 184 LLEAMCRNSGFEQAMAVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDARELLNRLPSYG 243
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLI 107
PD ++ L+K C K + +M K P E LI
Sbjct: 244 FQPDTVSYTTLLKGLCASKRWDDVEELFAEMMEKNCMPNEVTFDMLI 290
Score = 43.9 bits (102), Expect = 0.019, Method: Composition-based stats.
Identities = 28/124 (22%), Positives = 55/124 (44%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ CR G ++ ++L + + D V ++L C + + V + ++ E
Sbjct: 219 IINGMCREGRVDDARELLNRLPSYGFQPDTVSYTTLLKGLCASKRWDDVEELFAEMMEKN 278
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
P+ TF +LI++FC+ M A + + M G LC+ +I + K +A
Sbjct: 279 CMPNEVTFDMLIRFFCRGGMVERAIQVLEQMTEHGCATNTTLCNIVINSICKQGRVDDAF 338
Query: 121 SVYN 124
+ N
Sbjct: 339 KLLN 342
Score = 36.6 bits (83), Expect = 3.9, Method: Composition-based stats.
Identities = 23/99 (23%), Positives = 42/99 (42%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C G + L D + + +VV +L A CR E M V+ ++
Sbjct: 149 LIRVLCDRGRVADALSLLDDMLRRGCQPNVVTYTVLLEAMCRNSGFEQAMAVLDEMRAKG 208
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPE 99
+P+ T++++I C+E A + + G QP+
Sbjct: 209 CTPNIVTYNVIINGMCREGRVDDARELLNRLPSYGFQPD 247
Score = 36.2 bits (82), Expect = 4.4, Method: Composition-based stats.
Identities = 20/99 (20%), Positives = 47/99 (47%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ C S +++ ++L + K + V + ++ +CR G +E + V+ ++ E
Sbjct: 254 LLKGLCASKRWDDVEELFAEMMEKNCMPNEVTFDMLIRFFCRGGMVERAIQVLEQMTEHG 313
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPE 99
+ + +I+I CK+ A++ + DM G P+
Sbjct: 314 CATNTTLCNIVINSICKQGRVDDAFKLLNDMGSYGCNPD 352
>gi|218194637|gb|EEC77064.1| hypothetical protein OsI_15455 [Oryza sativa Indica Group]
Length = 864
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 30/119 (25%), Positives = 52/119 (43%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ C+ G E K + + +VV NS++ YC G+ME ++ + +
Sbjct: 514 IINNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMASIG 573
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEA 119
I P+ + L+ +CK A DM KG +P L S ++ L + R + A
Sbjct: 574 IEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYSIILHGLFQARRTTAA 632
Score = 45.1 bits (105), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 21/107 (19%), Positives = 47/107 (43%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ CR+ C +E L A K+D++ N ++ A + G + + +
Sbjct: 654 VLGGLCRNNCTDEANMLLEKLFAMNVKFDIITFNIVISAMFKVGRRQEAKELFDAISTYG 713
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLI 107
+ P+ T+ ++I KE+ Y A + + + GH + L + ++
Sbjct: 714 LVPNIQTYSMMITNLIKEESYEEADNLFISVEKSGHASDSRLLNHIV 760
Score = 41.2 bits (95), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 21/78 (26%), Positives = 41/78 (52%)
Query: 30 VVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYMLAYRTMV 89
+++ NS++ C+ +M+ +++K+ + I+PD T+ ++I CK K A R +
Sbjct: 225 ILICNSIIKELCKMKEMDKAESIVQKMVDSGIAPDLFTYSLIIDGLCKSKAMDKAERVLE 284
Query: 90 DMHRKGHQPEEELCSSLI 107
M G +P +SLI
Sbjct: 285 QMVEAGTRPNSITYNSLI 302
Score = 37.0 bits (84), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 31/125 (24%), Positives = 55/125 (44%), Gaps = 2/125 (1%)
Query: 2 ISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGD--MESVMHVMRKLDEL 59
I A + G E K + K K D++ ++ML Y D + V ++ +
Sbjct: 337 IHALFKHGRTNEAKCIFDSMVLKGPKPDIISYSTMLHGYATATDSCLADVHNIFNLMLTK 396
Query: 60 AISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEA 119
I+P+ + F+ILI + + M A DM KG P+ +++I L ++ +A
Sbjct: 397 GIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCRIGRLDDA 456
Query: 120 LSVYN 124
L +N
Sbjct: 457 LHKFN 461
>gi|147820978|emb|CAN74604.1| hypothetical protein VITISV_025315 [Vitis vinifera]
Length = 525
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 45/82 (54%), Gaps = 1/82 (1%)
Query: 1 MISAFCRSGCFEE-TKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDEL 59
++S + ++G F+E K L+G E+ K DV +N++L + G +E + K
Sbjct: 256 VLSGYGKAGKFDEMEKVLSGMLESTSSKPDVWTMNTILSLFGNKGQIEIMEKWYEKFRNF 315
Query: 60 AISPDYNTFHILIKYFCKEKMY 81
I P+ TF+ILI + K++MY
Sbjct: 316 GIEPETRTFNILIGAYGKKRMY 337
>gi|125596712|gb|EAZ36492.1| hypothetical protein OsJ_20823 [Oryza sativa Japonica Group]
Length = 604
Score = 48.9 bits (115), Expect = 7e-04, Method: Composition-based stats.
Identities = 23/94 (24%), Positives = 45/94 (47%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++S C++G F +L G + V+ +++ YC+ G ++ + ++R +DE
Sbjct: 429 LLSGSCKAGDFAAVDELLGKMIDDGCQPSVITFGTLVHGYCKVGKIDEALRILRSMDESG 488
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRK 94
I P+ ++ LI + CK LA +M K
Sbjct: 489 IHPNNVIYNTLIDFLCKRGDVDLAIELFDEMKEK 522
Score = 48.9 bits (115), Expect = 8e-04, Method: Composition-based stats.
Identities = 31/127 (24%), Positives = 57/127 (44%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ FCR E +L + + + DV N++L C+ GD +V ++ K+ +
Sbjct: 394 LIAGFCRKKRLHEAYELLQEMKEVGIRPDVCTYNTLLSGSCKAGDFAAVDELLGKMIDDG 453
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
P TF L+ +CK A R + M G P + ++LI L K A+
Sbjct: 454 CQPSVITFGTLVHGYCKVGKIDEALRILRSMDESGIHPNNVIYNTLIDFLCKRGDVDLAI 513
Query: 121 SVYNMLR 127
+++ ++
Sbjct: 514 ELFDEMK 520
Score = 44.7 bits (104), Expect = 0.013, Method: Composition-based stats.
Identities = 28/122 (22%), Positives = 52/122 (42%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
MIS ++G E+ +A + K D N ++ +CR + +++++ E+
Sbjct: 359 MISGLTQAGRLEDACSMASSMKEAGFKLDTKAYNILIAGFCRKKRLHEAYELLQEMKEVG 418
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
I PD T++ L+ CK + + M G QP +L+ K+ EAL
Sbjct: 419 IRPDVCTYNTLLSGSCKAGDFAAVDELLGKMIDDGCQPSVITFGTLVHGYCKVGKIDEAL 478
Query: 121 SV 122
+
Sbjct: 479 RI 480
Score = 36.6 bits (83), Expect = 3.4, Method: Composition-based stats.
Identities = 17/71 (23%), Positives = 33/71 (46%)
Query: 29 DVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYMLAYRTM 88
D ++ +M+ + G +E + + E D ++ILI FC++K AY +
Sbjct: 352 DAIMYFTMISGLTQAGRLEDACSMASSMKEAGFKLDTKAYNILIAGFCRKKRLHEAYELL 411
Query: 89 VDMHRKGHQPE 99
+M G +P+
Sbjct: 412 QEMKEVGIRPD 422
>gi|224069254|ref|XP_002302938.1| predicted protein [Populus trichocarpa]
gi|222844664|gb|EEE82211.1| predicted protein [Populus trichocarpa]
Length = 599
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 24/100 (24%), Positives = 49/100 (49%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C+ G F E ++ G+ + D ++L C+ GD+E + + +++ +
Sbjct: 378 LIDGLCKGGYFREARKFVGEMTKRGLIPDKFTYTTLLDGSCKEGDLELALEMRKEMVKEG 437
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEE 100
I D F +I C++ + A RT+ +M R G +P++
Sbjct: 438 IQLDNVAFTAIISGLCRDGKIVDAERTLREMLRAGLKPDD 477
Score = 42.4 bits (98), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 19/98 (19%), Positives = 45/98 (45%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ C+ G E ++ + + + D V +++ CR G + +R++
Sbjct: 413 LLDGSCKEGDLELALEMRKEMVKEGIQLDNVAFTAIISGLCRDGKIVDAERTLREMLRAG 472
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQP 98
+ PD T+ +++ FCK+ + ++ + +M GH P
Sbjct: 473 LKPDDGTYTMVMDGFCKKGDVKMGFKLLKEMQSDGHIP 510
Score = 42.4 bits (98), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 31/154 (20%), Positives = 65/154 (42%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+++ C+ G ++ + + + + V N+++ YC++G++E + ++E
Sbjct: 238 LMNRLCKEGKVKDAQLIFDEIRKTGLQPTAVSFNTLINGYCKSGNLEEGFRLKMVMEEFR 297
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ PD T+ LI CKE A +M +G P + ++LI K AL
Sbjct: 298 VFPDVFTYSALIDGLCKECQLEDANHLFKEMCDRGLVPNDVTFTTLINGQCKNGRVDLAL 357
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLKDA 154
+Y + L+ ++ L G ++A
Sbjct: 358 EIYQQMFTKGLKADLVLYNTLIDGLCKGGYFREA 391
Score = 35.4 bits (80), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 25/110 (22%), Positives = 51/110 (46%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ C++G + ++ K K D+VL N+++ C+ G + ++ +
Sbjct: 343 LINGQCKNGRVDLALEIYQQMFTKGLKADLVLYNTLIDGLCKGGYFREARKFVGEMTKRG 402
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHL 110
+ PD T+ L+ CKE LA +M ++G Q + +++I L
Sbjct: 403 LIPDKFTYTTLLDGSCKEGDLELALEMRKEMVKEGIQLDNVAFTAIISGL 452
>gi|357162065|ref|XP_003579293.1| PREDICTED: pentatricopeptide repeat-containing protein At2g31400,
chloroplastic-like [Brachypodium distachyon]
Length = 858
Score = 48.9 bits (115), Expect = 7e-04, Method: Composition-based stats.
Identities = 32/118 (27%), Positives = 55/118 (46%), Gaps = 1/118 (0%)
Query: 33 LNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYMLAYRTMVDMH 92
NS+L A R G +E + ++ L I D T++ I CK LA + ++DM
Sbjct: 307 FNSLLSACSRAGHLEDARALFDEMIHLGIGRDIYTYNTFIDAICKCGNIELAMQVLLDME 366
Query: 93 RKGHQPEEELCSSLIFHLGKMRAHSEALSVYNMLRYSKRSMCKALHEKILHILI-SGK 149
K +P S+LI K+ + EAL +Y ++ + + + +L I + +GK
Sbjct: 367 AKNVKPNVVTYSTLIDGYSKLEKYDEALKLYEKMKSLGIQLDRVCYNTVLAIYVKAGK 424
Score = 47.0 bits (110), Expect = 0.002, Method: Composition-based stats.
Identities = 30/124 (24%), Positives = 59/124 (47%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+++ + ++G + E + + E + D V NS++ Y + G ++ V +++ +
Sbjct: 415 VLAIYVKAGKYGEIAIVCDEMEDSGIEKDTVTYNSLINGYGKQGRLDIVSFLVQDMRRRG 474
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
++P T+ LI + K M+ A+ +D G +P+ L SS I L K AL
Sbjct: 475 VAPSVLTYSTLIDIYSKAGMHGDAFNVYLDFKESGLKPDVVLFSSFIDTLAKNGLVEWAL 534
Query: 121 SVYN 124
S+ N
Sbjct: 535 SLLN 538
Score = 40.8 bits (94), Expect = 0.18, Method: Composition-based stats.
Identities = 29/123 (23%), Positives = 56/123 (45%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I + + ++E +L ++ + D V N++L Y + G + V ++++
Sbjct: 380 LIDGYSKLEKYDEALKLYEKMKSLGIQLDRVCYNTVLAIYVKAGKYGEIAIVCDEMEDSG 439
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
I D T++ LI + K+ + + DM R+G P S+LI K H +A
Sbjct: 440 IEKDTVTYNSLINGYGKQGRLDIVSFLVQDMRRRGVAPSVLTYSTLIDIYSKAGMHGDAF 499
Query: 121 SVY 123
+VY
Sbjct: 500 NVY 502
Score = 37.7 bits (86), Expect = 1.7, Method: Composition-based stats.
Identities = 20/80 (25%), Positives = 41/80 (51%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I + ++G + + DF+ K DVVL +S + + G +E + ++ + E+
Sbjct: 485 LIDIYSKAGMHGDAFNVYLDFKESGLKPDVVLFSSFIDTLAKNGLVEWALSLLNDMTEMG 544
Query: 61 ISPDYNTFHILIKYFCKEKM 80
I P+ T++ +I F K K+
Sbjct: 545 IKPNVVTYNTIIDAFGKSKV 564
>gi|358347566|ref|XP_003637827.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355503762|gb|AES84965.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 639
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 29/122 (23%), Positives = 55/122 (45%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C+SG + L + + +++ NS+L C+ ++ + ++ K+ +
Sbjct: 375 LIDGLCKSGRISDVWDLIDEINNRGQPANIITYNSLLNGLCKNHQVDKAIALLTKMKDEG 434
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
I PD +T+ L+ CK A R D+ KG+ + + +I L K EAL
Sbjct: 435 IQPDMSTYTTLVDGLCKNGRLKDAQRIYQDLLCKGYPLNIRMYTVMINGLCKEGFFDEAL 494
Query: 121 SV 122
S+
Sbjct: 495 SL 496
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/148 (22%), Positives = 71/148 (47%), Gaps = 4/148 (2%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I +FC+ + L + K +VV NS++ +C G ++ + ++ ++
Sbjct: 200 IIDSFCKDKLVIDAYDLYSEMIVKKIYPNVVTFNSLIYGFCIVGQLKEAVGLLNEMSLNN 259
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
++P+ TF+ILI CKE A + M ++G +P +SL+ ++ ++A
Sbjct: 260 VNPNVYTFNILIDGLCKEGEVKKATSVLSVMIKQGVEPNVVTYTSLMDGYFLVKEVNKAK 319
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISG 148
V+N + S R + +H ++I+G
Sbjct: 320 HVFNTI--SLRGVTPNVHS--YSVMING 343
Score = 42.0 bits (97), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 24/107 (22%), Positives = 47/107 (43%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C+ G ++ + + + +VV S++ Y ++ HV +
Sbjct: 270 LIDGLCKEGEVKKATSVLSVMIKQGVEPNVVTYTSLMDGYFLVKEVNKAKHVFNTISLRG 329
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLI 107
++P+ +++ ++I CK KM A + +MH K P SSLI
Sbjct: 330 VTPNVHSYSVMINGLCKNKMVDEAVKLFKEMHLKNMTPNTVTYSSLI 376
Score = 41.6 bits (96), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 29/125 (23%), Positives = 57/125 (45%), Gaps = 1/125 (0%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ C +G +E K D V +++ C++G+ + + ++RK++ L
Sbjct: 129 LLRGLCLNGKVKEALNFHDHVIRKRFHLDQVSYGTLINGLCKSGETRAALQLLRKIEGLL 188
Query: 61 -ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEA 119
+ PD + +I FCK+K+ + AY +M K P +SLI+ + EA
Sbjct: 189 LVRPDVIMYTAIIDSFCKDKLVIDAYDLYSEMIVKKIYPNVVTFNSLIYGFCIVGQLKEA 248
Query: 120 LSVYN 124
+ + N
Sbjct: 249 VGLLN 253
Score = 40.0 bits (92), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 31/150 (20%), Positives = 68/150 (45%), Gaps = 8/150 (5%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
MI+ C++ +E +L + K + V +S++ C++G + V ++ +++
Sbjct: 340 MINGLCKNKMVDEAVKLFKEMHLKNMTPNTVTYSSLIDGLCKSGRISDVWDLIDEINNRG 399
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ T++ L+ CK A + M +G QP+ ++L+ L K +A
Sbjct: 400 QPANIITYNSLLNGLCKNHQVDKAIALLTKMKDEGIQPDMSTYTTLVDGLCKNGRLKDAQ 459
Query: 121 SVYNMLRYSKRSMCKA--LHEKILHILISG 148
+Y L +CK L+ ++ ++I+G
Sbjct: 460 RIYQDL------LCKGYPLNIRMYTVMING 483
>gi|356523285|ref|XP_003530271.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g28010-like [Glycine max]
Length = 703
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 35/159 (22%), Positives = 74/159 (46%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I +C+SG E L + E + K DV + +S++ A+C GD+E+ + ++
Sbjct: 191 LIDCYCKSGEVGEGLGLLEEMEREGLKADVFVYSSLISAFCGEGDIETGRELFDEMLRRK 250
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+SP+ T+ L++ + + A + DM +G +P+ + L L K +A+
Sbjct: 251 VSPNVVTYSCLMQGLGRTGRWREASEMLKDMTARGVRPDVVAYTVLADGLCKNGRAGDAI 310
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLKDAYIVVK 159
V +++ + +++ L + DA+ VV+
Sbjct: 311 KVLDLMVQKGEEPGTLTYNVVVNGLCKEDRMDDAFGVVE 349
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 35/134 (26%), Positives = 65/134 (48%), Gaps = 8/134 (5%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVV---LLNSMLCAYCRTGDMESVMHVMRKLD 57
++ R+G + E ++ D A+ + DVV +L LC R GD V+ +M +
Sbjct: 261 LMQGLGRTGRWREASEMLKDMTARGVRPDVVAYTVLADGLCKNGRAGDAIKVLDLMVQKG 320
Query: 58 ELAISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHL-GKMRAH 116
E P T+++++ CKE A+ + M +KG +P+ ++L+ L G + H
Sbjct: 321 E---EPGTLTYNVVVNGLCKEDRMDDAFGVVEMMVKKGKKPDAVTYNTLLKGLCGAGKIH 377
Query: 117 SEALSVYNMLRYSK 130
EA+ ++ +L K
Sbjct: 378 -EAMDLWKLLLSEK 390
Score = 42.0 bits (97), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 30/120 (25%), Positives = 54/120 (45%), Gaps = 1/120 (0%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++++ CR E+ + L + DVV N ++ + GD++S ++ ++ +
Sbjct: 508 LMTSLCREDSLEQARSLFQEMRNVNHNVDVVSFNIIIDGTLKAGDVKSAKELLSEMFMMD 567
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ PD TF ILI F K M A M GH P + SL+ G ++ +E +
Sbjct: 568 LVPDAVTFSILINRFSKLGMLDEAMGLYEKMVSCGHVPGVVVFDSLLKGYG-LKGETEKI 626
Score = 42.0 bits (97), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 28/126 (22%), Positives = 53/126 (42%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+ISAFC G E ++L + + +VV + ++ RTG +++ +
Sbjct: 226 LISAFCGEGDIETGRELFDEMLRRKVSPNVVTYSCLMQGLGRTGRWREASEMLKDMTARG 285
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ PD + +L CK A + + M +KG +P + ++ L K +A
Sbjct: 286 VRPDVVAYTVLADGLCKNGRAGDAIKVLDLMVQKGEEPGTLTYNVVVNGLCKEDRMDDAF 345
Query: 121 SVYNML 126
V M+
Sbjct: 346 GVVEMM 351
Score = 36.2 bits (82), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 28/112 (25%), Positives = 51/112 (45%), Gaps = 7/112 (6%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYD--KYDVVLLNSMLCAYC---RTGDMESVMHVMRK 55
++ FCRSG ++ L + YD D V N+++ +C R + + M+K
Sbjct: 118 VLKGFCRSGQCDKAMSLFSQMKRNYDCVVPDCVTYNTLVNGFCKAKRLAEARVLFEAMKK 177
Query: 56 LDELAISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLI 107
+ P+ T+ +LI +CK + +M R+G + + + SSLI
Sbjct: 178 GGD--CRPNLVTYSVLIDCYCKSGEVGEGLGLLEEMEREGLKADVFVYSSLI 227
>gi|302780413|ref|XP_002971981.1| hypothetical protein SELMODRAFT_96362 [Selaginella moellendorffii]
gi|300160280|gb|EFJ26898.1| hypothetical protein SELMODRAFT_96362 [Selaginella moellendorffii]
Length = 294
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 35/148 (23%), Positives = 64/148 (43%), Gaps = 6/148 (4%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C++G E +L GD +AK+ DV++ + ++ +C+ + + + A
Sbjct: 53 LIDGLCKTGRVPEANRLFGDMKAKFCNLDVIMYSCLIGGFCKLERINMACTLFDDTLKQA 112
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
I PD TF L++ +C + A R + +M P+ +SL+ K+ EA
Sbjct: 113 ILPDVVTFSTLVEGYCNAGLVDDAERLLEEMVASDCSPDVYTYTSLVDGFCKVGRMVEAR 172
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISG 148
V KR + ++ LI G
Sbjct: 173 RVL------KRMAKRGCQPNVVWSLIGG 194
Score = 37.7 bits (86), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 27/137 (19%), Positives = 61/137 (44%), Gaps = 3/137 (2%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLD-EL 59
++ FC+ G E +++ + + +VV S++ +C TGD+E ++ +L+ +
Sbjct: 158 LVDGFCKVGRMVEARRVLKRMAKRGCQPNVVW--SLIGGFCGTGDLEEARKMLERLERDE 215
Query: 60 AISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEA 119
D + +++ C A + + + G P ++ +LI L + + +A
Sbjct: 216 NCKADMFAYQVMMDGLCTTGRMSAALELLEAIKQSGTPPRHDIYVALIRGLCQGKELGKA 275
Query: 120 LSVYNMLRYSKRSMCKA 136
L V + S++S A
Sbjct: 276 LEVLEEMTLSRKSRPNA 292
>gi|225453062|ref|XP_002266822.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04760,
chloroplastic-like [Vitis vinifera]
Length = 582
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 31/127 (24%), Positives = 65/127 (51%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ AF G ++E ++L + ++ + + V + ++ + CR G ++ + V++ + E
Sbjct: 283 LLRAFLNQGKWDEGEKLVAEMFSRGCEPNKVTYSILISSLCRFGRIDEAISVLKVMIEKE 342
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
++PD ++ LI CKE LA M M G P+ ++++ L K ++AL
Sbjct: 343 LTPDTYSYDPLISALCKEGRLDLAIGIMDYMISNGCLPDIVNYNTILAALCKNGNANQAL 402
Query: 121 SVYNMLR 127
++N LR
Sbjct: 403 EIFNKLR 409
Score = 40.8 bits (94), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 24/123 (19%), Positives = 56/123 (45%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+++A C++G + ++ +V N+M+ A GD + ++ +
Sbjct: 388 ILAALCKNGNANQALEIFNKLRGMGCPPNVSSYNTMISALWSCGDRSRALGMVPAMISKG 447
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ PD T++ LI C++ + A + DM + G +P + ++ L K+R +A+
Sbjct: 448 VDPDEITYNSLISCLCRDGLVEEAIGLLDDMEQSGFRPTVISYNIVLLGLCKVRRIDDAI 507
Query: 121 SVY 123
++
Sbjct: 508 GMF 510
Score = 40.4 bits (93), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 30/126 (23%), Positives = 54/126 (42%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
MISA G + +K D + NS++ CR G +E + ++ +++
Sbjct: 423 MISALWSCGDRSRALGMVPAMISKGVDPDEITYNSLISCLCRDGLVEEAIGLLDDMEQSG 482
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
P +++I++ CK + A +M KG +P E LI +G +EA+
Sbjct: 483 FRPTVISYNIVLLGLCKVRRIDDAIGMFAEMIEKGCRPNETTYILLIEGIGFAGWRTEAM 542
Query: 121 SVYNML 126
+ N L
Sbjct: 543 ELANSL 548
Score = 40.0 bits (92), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 30/131 (22%), Positives = 60/131 (45%), Gaps = 4/131 (3%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+ISA C+ G + + + D+V N++L A C+ G+ + + KL +
Sbjct: 353 LISALCKEGRLDLAIGIMDYMISNGCLPDIVNYNTILAALCKNGNANQALEIFNKLRGMG 412
Query: 61 ISPDYNTFHILIK--YFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSE 118
P+ ++++ +I + C ++ L + M KG P+E +SLI L + E
Sbjct: 413 CPPNVSSYNTMISALWSCGDRSRALGM--VPAMISKGVDPDEITYNSLISCLCRDGLVEE 470
Query: 119 ALSVYNMLRYS 129
A+ + + + S
Sbjct: 471 AIGLLDDMEQS 481
>gi|52076779|dbj|BAD45723.1| putative pentatricopeptide repeat-containing protein [Oryza sativa
Japonica Group]
Length = 629
Score = 48.9 bits (115), Expect = 7e-04, Method: Composition-based stats.
Identities = 23/94 (24%), Positives = 45/94 (47%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++S C++G F +L G + V+ +++ YC+ G ++ + ++R +DE
Sbjct: 429 LLSGSCKAGDFAAVDELLGKMIDDGCQPSVITFGTLVHGYCKVGKIDEALRILRSMDESG 488
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRK 94
I P+ ++ LI + CK LA +M K
Sbjct: 489 IHPNNVIYNTLIDFLCKRGDVDLAIELFDEMKEK 522
Score = 48.5 bits (114), Expect = 8e-04, Method: Composition-based stats.
Identities = 31/127 (24%), Positives = 57/127 (44%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ FCR E +L + + + DV N++L C+ GD +V ++ K+ +
Sbjct: 394 LIAGFCRKKRLHEAYELLQEMKEVGIRPDVCTYNTLLSGSCKAGDFAAVDELLGKMIDDG 453
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
P TF L+ +CK A R + M G P + ++LI L K A+
Sbjct: 454 CQPSVITFGTLVHGYCKVGKIDEALRILRSMDESGIHPNNVIYNTLIDFLCKRGDVDLAI 513
Query: 121 SVYNMLR 127
+++ ++
Sbjct: 514 ELFDEMK 520
Score = 44.7 bits (104), Expect = 0.014, Method: Composition-based stats.
Identities = 28/122 (22%), Positives = 52/122 (42%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
MIS ++G E+ +A + K D N ++ +CR + +++++ E+
Sbjct: 359 MISGLTQAGRLEDACSMASSMKEAGFKLDTKAYNILIAGFCRKKRLHEAYELLQEMKEVG 418
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
I PD T++ L+ CK + + M G QP +L+ K+ EAL
Sbjct: 419 IRPDVCTYNTLLSGSCKAGDFAAVDELLGKMIDDGCQPSVITFGTLVHGYCKVGKIDEAL 478
Query: 121 SV 122
+
Sbjct: 479 RI 480
Score = 36.6 bits (83), Expect = 3.5, Method: Composition-based stats.
Identities = 17/71 (23%), Positives = 33/71 (46%)
Query: 29 DVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYMLAYRTM 88
D ++ +M+ + G +E + + E D ++ILI FC++K AY +
Sbjct: 352 DAIMYFTMISGLTQAGRLEDACSMASSMKEAGFKLDTKAYNILIAGFCRKKRLHEAYELL 411
Query: 89 VDMHRKGHQPE 99
+M G +P+
Sbjct: 412 QEMKEVGIRPD 422
>gi|414865374|tpg|DAA43931.1| TPA: hypothetical protein ZEAMMB73_168023 [Zea mays]
Length = 793
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 44/99 (44%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I A+C+ G E+ Q K DVV N+++ C G +E M + E
Sbjct: 566 IIHAYCKEGDLEKAFQFHNKMVENSFKPDVVTCNTLMNGLCLYGRLEKAMKLFESWVEKG 625
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPE 99
D T++ LI+ CK+ A R DM +G QP+
Sbjct: 626 KKVDVITYNTLIQALCKDNDVDTALRFFADMEVRGLQPD 664
Score = 41.6 bits (96), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 25/93 (26%), Positives = 47/93 (50%)
Query: 27 KYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYMLAYR 86
K +V N ++ CR G +E + + + E ++PD T++ LI CK A+
Sbjct: 382 KSSLVTHNIIVKGLCREGQLEEALGRLEMMTEEGLTPDVITYNTLIDASCKAGNVAKAFV 441
Query: 87 TMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEA 119
M +M R G + + ++L+++L K + + EA
Sbjct: 442 LMDEMVRSGLKMDTFTLNTLLYNLCKEKRYEEA 474
Score = 40.4 bits (93), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 36/156 (23%), Positives = 66/156 (42%), Gaps = 27/156 (17%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDK---YDVVLLNSMLCAYCRTGDMESVMHVMRKLD 57
++ CR G EE G E ++ DV+ N+++ A C+ G++ +M ++
Sbjct: 391 IVKGLCREGQLEEA---LGRLEMMTEEGLTPDVITYNTLIDASCKAGNVAKAFVLMDEMV 447
Query: 58 ELAISPDYNTFHILIKYFCKEKMY------------------MLAYRTMVDMHRKGHQPE 99
+ D T + L+ CKEK Y ++Y T++ + K ++PE
Sbjct: 448 RSGLKMDTFTLNTLLYNLCKEKRYEEAEELLRAPPQRGFVPDEVSYGTVMAAYFKEYKPE 507
Query: 100 EELCSSLIFHLGKMRAHSEALSVYNMLRYSKRSMCK 135
LC ++ R + ++S YN L +M K
Sbjct: 508 PALC---LWDEMIKRKLTPSISTYNTLIKGLSTMGK 540
Score = 38.1 bits (87), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 18/95 (18%), Positives = 46/95 (48%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+++ C G E+ +L + K K DV+ N+++ A C+ D+++ + ++
Sbjct: 601 LMNGLCLYGRLEKAMKLFESWVEKGKKVDVITYNTLIQALCKDNDVDTALRFFADMEVRG 660
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKG 95
+ PD T+++L+ + + A + + ++ G
Sbjct: 661 LQPDVFTYNVLLSALSEAGRSVEAQKMLHKLNESG 695
Score = 38.1 bits (87), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 27/128 (21%), Positives = 57/128 (44%), Gaps = 1/128 (0%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+++A CR G E + L + + N+++ AY R G ++ V+ +
Sbjct: 250 LLNAHCRKGMLGEARTLLARMKKEGIVPTRATYNTLVSAYARLGWIKQATDVVEAMTAFG 309
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKG-HQPEEELCSSLIFHLGKMRAHSEA 119
PD T+++L C+ A++ +M + G P+ ++L+ K + S+A
Sbjct: 310 FEPDLWTYNVLAAGLCQAGKVDEAFKLKDEMEQLGIVSPDVVTYNTLVDACFKCQRSSDA 369
Query: 120 LSVYNMLR 127
L++ +R
Sbjct: 370 LNLLEEMR 377
>gi|255566084|ref|XP_002524030.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223536757|gb|EEF38398.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 1016
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 29/119 (24%), Positives = 58/119 (48%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I +C+ G E + L + E K+ +V+ +S++ Y + G ++ ++VM+K+ +
Sbjct: 384 LIDGYCKVGDMERVESLLQEMEEKHINPNVITYSSIINGYTKKGILDEAINVMKKMLDQN 443
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEA 119
I P+ + ILI +CK +A +M G + L L+ +L + + EA
Sbjct: 444 IIPNAYVYAILIDGYCKAGKQEIATDLYNEMKLSGLKVNNVLFDVLVNNLKRGKRMDEA 502
Score = 43.9 bits (102), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 29/120 (24%), Positives = 59/120 (49%)
Query: 35 SMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRK 94
+++ YC+ GDME V ++++++E I+P+ T+ +I + K+ + A M M +
Sbjct: 383 ALIDGYCKVGDMERVESLLQEMEEKHINPNVITYSSIINGYTKKGILDEAINVMKKMLDQ 442
Query: 95 GHQPEEELCSSLIFHLGKMRAHSEALSVYNMLRYSKRSMCKALHEKILHILISGKLLKDA 154
P + + LI K A +YN ++ S + L + +++ L GK + +A
Sbjct: 443 NIIPNAYVYAILIDGYCKAGKQEIATDLYNEMKLSGLKVNNVLFDVLVNNLKRGKRMDEA 502
Score = 41.2 bits (95), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 18/81 (22%), Positives = 42/81 (51%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ FCR G + +++ + + DV+ N+++ YC+ G+M + ++ ++ +
Sbjct: 118 LVKGFCRIGLAKYGERIMDNLVSGGTCKDVIGFNTLIDGYCKAGEMSLALDLVERMRKEG 177
Query: 61 ISPDYNTFHILIKYFCKEKMY 81
+ D +++ LI FCK Y
Sbjct: 178 LLSDIVSYNTLINGFCKRGEY 198
Score = 40.0 bits (92), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 27/124 (21%), Positives = 55/124 (44%), Gaps = 1/124 (0%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ F ++G + + K +DVV N ++ G E+ V + E+
Sbjct: 524 LMDGFFKAGKESAALNMVEEMTEKSIPFDVVTYNVLINGLLEHGKYEA-KSVYSGMIEMG 582
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
++P+ T++I+IK +CK+ A +M P C++L+ L + +A+
Sbjct: 583 LAPNQATYNIMIKAYCKQGELDNALELWNEMKSHKIMPSSITCNTLVVGLSEAGEIEKAM 642
Query: 121 SVYN 124
+V N
Sbjct: 643 NVLN 646
>gi|222613030|gb|EEE51162.1| hypothetical protein OsJ_31934 [Oryza sativa Japonica Group]
Length = 404
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 34/123 (27%), Positives = 60/123 (48%), Gaps = 17/123 (13%)
Query: 1 MISAFCRSG-------CFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVM 53
+I+ +C++ FEE KQ + VV NS++ C G +E + +M
Sbjct: 205 LINGYCKNSNTAAAVRVFEEMKQ-------QGIAASVVTYNSLISGLCSEGKVEEGVKLM 257
Query: 54 RKLDELAISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLI---FHL 110
++++L +SP+ TF ++K FCK+ M A + M + +P+ + + LI L
Sbjct: 258 EEMEDLGLSPNEITFGCVLKGFCKKGMMADANDWIDGMTERNVEPDVVIYNILIDVYRRL 317
Query: 111 GKM 113
GKM
Sbjct: 318 GKM 320
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 48/105 (45%), Gaps = 3/105 (2%)
Query: 9 GCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHV---MRKLDELAISPDY 65
G + +A D +A V NS++ YC+ G ++ HV ++++ E ISP
Sbjct: 140 GQLRKAGDVAKDIKAWGLAPSVATYNSLIDGYCKKGGAGNMYHVDMLLKEMVEAGISPTA 199
Query: 66 NTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHL 110
TF +LI +CK A R +M ++G +SLI L
Sbjct: 200 VTFGVLINGYCKNSNTAAAVRVFEEMKQQGIAASVVTYNSLISGL 244
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 43/95 (45%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ FC+ G + + + DVV+ N ++ Y R G ME M V + +
Sbjct: 275 VLKGFCKKGMMADANDWIDGMTERNVEPDVVIYNILIDVYRRLGKMEDAMAVKEAMAKKG 334
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKG 95
ISP+ T++ LI F + + A + +M KG
Sbjct: 335 ISPNVTTYNCLITGFSRSGDWRSASGLLDEMKEKG 369
>gi|414590400|tpg|DAA40971.1| TPA: hypothetical protein ZEAMMB73_404079 [Zea mays]
Length = 745
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 35/127 (27%), Positives = 61/127 (48%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+++ FC SG E K+L K + NS++ YC +M+S + + +
Sbjct: 577 LMNGFCMSGRVEGGKKLLDWMLEKNIHPNAATYNSLMKQYCIENNMKSTTEIYKGMRSRD 636
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ P+ NT++ILIK CK + A +M +KG + S+LI L K + EA
Sbjct: 637 VGPNENTYNILIKGHCKARNMKEALYFHDEMIQKGFRLTATSYSALIRLLNKKKKFVEAR 696
Query: 121 SVYNMLR 127
+++ +R
Sbjct: 697 ELFHDMR 703
Score = 44.7 bits (104), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 24/98 (24%), Positives = 42/98 (42%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+ C+ G + +L + K + + NS++ C+ G +E M M +D
Sbjct: 472 LTDGLCKQGDVQAANELLHEMSNKGLELNACTYNSLINGLCKAGYLEQAMRTMADMDTAC 531
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQP 98
+ PD T+ LI CK A+ + +M KG +P
Sbjct: 532 LKPDVYTYTTLIDALCKSGDLDRAHSLLQEMLDKGIKP 569
Score = 44.3 bits (103), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 18/76 (23%), Positives = 42/76 (55%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ C++G E+ + D + K DV +++ A C++GD++ +++++ +
Sbjct: 507 LINGLCKAGYLEQAMRTMADMDTACLKPDVYTYTTLIDALCKSGDLDRAHSLLQEMLDKG 566
Query: 61 ISPDYNTFHILIKYFC 76
I P T+++L+ FC
Sbjct: 567 IKPTIVTYNVLMNGFC 582
Score = 42.4 bits (98), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 23/95 (24%), Positives = 42/95 (44%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
MI+ CR+ EE ++L + A+ D V ++ YC+ G M + + +
Sbjct: 402 MINGLCRAVELEEAEKLLQEMWARRLDVDEVTYTVLIDGYCKRGKMAEAFQMHNAMVQRG 461
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKG 95
++P+ T+ L CK+ A + +M KG
Sbjct: 462 VTPNVVTYTALTDGLCKQGDVQAANELLHEMSNKG 496
Score = 42.0 bits (97), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 30/121 (24%), Positives = 54/121 (44%), Gaps = 4/121 (3%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I +C+ G E Q+ + +VV ++ C+ GD+++ ++ ++
Sbjct: 437 LIDGYCKRGKMAEAFQMHNAMVQRGVTPNVVTYTALTDGLCKQGDVQAANELLHEMSNKG 496
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKM----RAH 116
+ + T++ LI CK A RTM DM +P+ ++LI L K RAH
Sbjct: 497 LELNACTYNSLINGLCKAGYLEQAMRTMADMDTACLKPDVYTYTTLIDALCKSGDLDRAH 556
Query: 117 S 117
S
Sbjct: 557 S 557
Score = 41.2 bits (95), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 31/120 (25%), Positives = 51/120 (42%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I A C+SG + L + K K +V N ++ +C +G +E ++ + E
Sbjct: 542 LIDALCKSGDLDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKKLLDWMLEKN 601
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
I P+ T++ L+K +C E M + P E + LI K R EAL
Sbjct: 602 IHPNAATYNSLMKQYCIENNMKSTTEIYKGMRSRDVGPNENTYNILIKGHCKARNMKEAL 661
Score = 36.2 bits (82), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 27/123 (21%), Positives = 55/123 (44%), Gaps = 3/123 (2%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++S FC G ++ + + K D V +M+ CR ++E +++++
Sbjct: 367 VLSGFCNKGDLVSARRWFDEMQRKGLATDGVTYTTMINGLCRAVELEEAEKLLQEMWARR 426
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHL---GKMRAHS 117
+ D T+ +LI +CK A++ M ++G P ++L L G ++A +
Sbjct: 427 LDVDEVTYTVLIDGYCKRGKMAEAFQMHNAMVQRGVTPNVVTYTALTDGLCKQGDVQAAN 486
Query: 118 EAL 120
E L
Sbjct: 487 ELL 489
Score = 35.8 bits (81), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 18/91 (19%), Positives = 43/91 (47%), Gaps = 3/91 (3%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ A C +G ++ +QL F+ DVV ++ +C G++E+ + ++ ++
Sbjct: 265 LLKALCDAGRVKDARQL---FDEMASAPDVVTYGILIHGHCALGELENAVKLLDEMVAGG 321
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDM 91
+ P+ + ++ C + A R + DM
Sbjct: 322 VEPNATVYTSVVALLCDKGWISDALRVVEDM 352
>gi|218185204|gb|EEC67631.1| hypothetical protein OsI_35025 [Oryza sativa Indica Group]
Length = 800
Score = 48.9 bits (115), Expect = 7e-04, Method: Composition-based stats.
Identities = 28/107 (26%), Positives = 48/107 (44%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I FC G L + + DVV +++ G + + V K+ E
Sbjct: 595 LIHGFCMRGELMAASDLLMEMMGRGHTPDVVTFGALIHGLVVAGKVSEALIVREKMTERQ 654
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLI 107
+ PD N +++LI CK+ M A + +M K QP+E + ++LI
Sbjct: 655 VFPDVNIYNVLISGLCKKHMLPAAKNILEEMLEKNVQPDEFVYATLI 701
Score = 46.2 bits (108), Expect = 0.004, Method: Composition-based stats.
Identities = 39/151 (25%), Positives = 71/151 (47%), Gaps = 10/151 (6%)
Query: 1 MISAFCRSGCFEETKQ---LAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLD 57
+I A C+ C+ T+ L F + D D++ N+++ C G + H +R+
Sbjct: 525 VIDALCK--CWSATQAMVILKQMFASGCDP-DIITFNTLITGLCHEGHVRKAEHFLREAI 581
Query: 58 ELAISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHS 117
++P+ ++ LI FC M A +++M +GH P+ +LI L S
Sbjct: 582 RRELNPNQLSYTPLIHGFCMRGELMAASDLLMEMMGRGHTPDVVTFGALIHGLVVAGKVS 641
Query: 118 EALSVYNMLRYSKRSMCKALHEKILHILISG 148
EAL V + ++R + ++ I ++LISG
Sbjct: 642 EALIVRE--KMTERQVFPDVN--IYNVLISG 668
Score = 37.0 bits (84), Expect = 2.7, Method: Composition-based stats.
Identities = 29/129 (22%), Positives = 58/129 (44%), Gaps = 6/129 (4%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDK---YDVVLLNSMLCAYCRTGDMESVMHVMRKLD 57
++ C G EE +L EA++ VV N ++ YCR GDM + ++ +++
Sbjct: 420 LVRGLCLEGRVEEGLKL---IEARWGAGCIPHVVFYNVLIDGYCRRGDMGRGLLLLGEME 476
Query: 58 ELAISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHS 117
P T+ LI K+ ++M ++G P ++ +S+I L K + +
Sbjct: 477 AKGFLPTLVTYGSLINCLGKKGDLEKIGSLFLEMRKRGLSPNVQIYNSVIDALCKCWSAT 536
Query: 118 EALSVYNML 126
+A+ + +
Sbjct: 537 QAMVILKQM 545
Score = 36.2 bits (82), Expect = 4.3, Method: Composition-based stats.
Identities = 28/117 (23%), Positives = 51/117 (43%), Gaps = 3/117 (2%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I +CR G L G+ EAK +V S++ + GD+E + + ++ +
Sbjct: 455 LIDGYCRRGDMGRGLLLLGEMEAKGFLPTLVTYGSLINCLGKKGDLEKIGSLFLEMRKRG 514
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIF---HLGKMR 114
+SP+ ++ +I CK A + M G P+ ++LI H G +R
Sbjct: 515 LSPNVQIYNSVIDALCKCWSATQAMVILKQMFASGCDPDIITFNTLITGLCHEGHVR 571
>gi|414874052|tpg|DAA52609.1| TPA: hypothetical protein ZEAMMB73_367214 [Zea mays]
Length = 716
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 28/125 (22%), Positives = 61/125 (48%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I A+ G ++ + + K DVV +++ A CR G M+ M ++ +
Sbjct: 404 LIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYTTVIAALCRIGKMDDAMEKFNQMIDQG 463
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
++PD +H LI+ FC + A ++++ G + + SS+I +L K+ +A
Sbjct: 464 VAPDKYAYHCLIQGFCTHGSLLKAKELILEIMNNGMRLDIVFFSSIINNLCKLGRIMDAQ 523
Query: 121 SVYNM 125
+++++
Sbjct: 524 NIFDL 528
Score = 38.1 bits (87), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 22/99 (22%), Positives = 45/99 (45%)
Query: 29 DVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYMLAYRTM 88
DVV +++ + + GD+ + +++ + I PD T+ ++ CK + A +
Sbjct: 222 DVVAYTTVIDCFFKEGDVNKACDLFKEMVQRGIPPDLVTYSSVVHALCKARAMGKAEAFL 281
Query: 89 VDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVYNMLR 127
M KG P+ ++LI+ EA+ V+ +R
Sbjct: 282 RQMVNKGVLPDNWTYNNLIYGYSSTGQWKEAVRVFKEMR 320
Score = 35.8 bits (81), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 31/129 (24%), Positives = 56/129 (43%), Gaps = 6/129 (4%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTG---DMESVMHVMRKLD 57
++ + C+ G +E + + K DV ML Y G DM + +M L
Sbjct: 334 LMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYKIMLNGYATKGCLVDMTDLFDLM--LG 391
Query: 58 ELAISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHS 117
+ I+PD TF +LIK + M A +M G +P+ +++I L ++
Sbjct: 392 D-GIAPDIYTFSVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYTTVIAALCRIGKMD 450
Query: 118 EALSVYNML 126
+A+ +N +
Sbjct: 451 DAMEKFNQM 459
Score = 35.4 bits (80), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 25/123 (20%), Positives = 50/123 (40%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I FC G + K+L + + D+V +S++ C+ G + ++ +
Sbjct: 474 LIQGFCTHGSLLKAKELILEIMNNGMRLDIVFFSSIINNLCKLGRIMDAQNIFDLTVNVG 533
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
PD + +L+ +C A R M G +P + +L+ K+ E L
Sbjct: 534 QHPDAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVVYGTLVNGYCKIGRIDEGL 593
Query: 121 SVY 123
S++
Sbjct: 594 SLF 596
>gi|363543233|ref|NP_001241831.1| uncharacterized protein LOC100857030 [Zea mays]
gi|224033903|gb|ACN36027.1| unknown [Zea mays]
Length = 655
Score = 48.9 bits (115), Expect = 7e-04, Method: Composition-based stats.
Identities = 29/110 (26%), Positives = 50/110 (45%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ A CR G F ++ D A+ DV N +L A C G ++ +H++R L
Sbjct: 163 ILEAACRGGGFRSAVRVLEDLHARGCALDVGNCNLVLNAICDQGSVDEALHLLRDLPSFG 222
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHL 110
PD +++ ++K C K + M +M R P ++LI +L
Sbjct: 223 CEPDVVSYNAVLKGLCMAKRWGCVQELMEEMVRMACPPNIVTFNTLISYL 272
Score = 47.8 bits (112), Expect = 0.002, Method: Composition-based stats.
Identities = 26/107 (24%), Positives = 50/107 (46%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+++A C G +E L D + + DVV N++L C V +M ++ +A
Sbjct: 198 VLNAICDQGSVDEALHLLRDLPSFGCEPDVVSYNAVLKGLCMAKRWGCVQELMEEMVRMA 257
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLI 107
P+ TF+ LI Y C+ ++ + + M G P+ + +++I
Sbjct: 258 CPPNIVTFNTLISYLCRNGLFERVHEVLAQMVEHGCTPDIRMYATII 304
Score = 45.1 bits (105), Expect = 0.011, Method: Composition-based stats.
Identities = 25/95 (26%), Positives = 45/95 (47%), Gaps = 3/95 (3%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
M++ +CR+G E ++LA + Y + LCA R D +V+ M +
Sbjct: 96 MVAGYCRAGQLESARRLAAAVPVPPNAYTYFPVVRALCARGRIADALAVLDEMPRRGCAP 155
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKG 95
I P Y H++++ C+ + A R + D+H +G
Sbjct: 156 IPPMY---HVILEAACRGGGFRSAVRVLEDLHARG 187
Score = 42.7 bits (99), Expect = 0.054, Method: Composition-based stats.
Identities = 25/98 (25%), Positives = 48/98 (48%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ C + +EET++L + K D V N ++ +C+ G ++ V+ ++ ++ E
Sbjct: 338 LLKGLCSAERWEETEELLAEMFDKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLERG 397
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQP 98
PD T+ +I FCKE + A + M G +P
Sbjct: 398 CMPDVITYTTVINGFCKEGLIDEAVMLLKSMTACGCKP 435
Score = 38.9 bits (89), Expect = 0.66, Method: Composition-based stats.
Identities = 35/129 (27%), Positives = 58/129 (44%), Gaps = 6/129 (4%)
Query: 1 MISAFCRSGCFEETKQLAGDFEA---KYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLD 57
+I+ FC+ G +E L A K + ++ LC+ R D E +M M +
Sbjct: 408 VINGFCKEGLIDEAVMLLKSMTACGCKPNTISYTIVLKGLCSAERWVDAEDLMSQMIQ-Q 466
Query: 58 ELAISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHS 117
++P TF+ LI + CK+ + A + M G P+ S++I LGK
Sbjct: 467 GCPLNPI--TFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTD 524
Query: 118 EALSVYNML 126
EAL + N++
Sbjct: 525 EALELLNVM 533
Score = 38.5 bits (88), Expect = 0.82, Method: Composition-based stats.
Identities = 19/70 (27%), Positives = 34/70 (48%)
Query: 29 DVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYMLAYRTM 88
++V N+++ CR G E V V+ ++ E +PD + +I CKE +A+ +
Sbjct: 261 NIVTFNTLISYLCRNGLFERVHEVLAQMVEHGCTPDIRMYATIIDGICKEGHLEVAHEIL 320
Query: 89 VDMHRKGHQP 98
M G +P
Sbjct: 321 NRMPSYGLKP 330
>gi|357130030|ref|XP_003566661.1| PREDICTED: protein Rf1, mitochondrial-like [Brachypodium
distachyon]
Length = 827
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 32/127 (25%), Positives = 61/127 (48%), Gaps = 1/127 (0%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+ISA + G +E + + + + + +VV ++++ A+CR G + M ++ +
Sbjct: 413 LISAHAKRGMMDEAMLVFTEMQGQGVRPNVVTYSTLISAFCRMGRLADAMEKFSQMISIG 472
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKG-HQPEEELCSSLIFHLGKMRAHSEA 119
I P+ +H LI FC + A + +M KG H+P SS+I L +A
Sbjct: 473 IEPNTAVYHSLIHGFCMHGDLVKAKEFISEMMSKGLHRPNIVFFSSIIHSLCIEGRVMDA 532
Query: 120 LSVYNML 126
V+N++
Sbjct: 533 QDVFNLV 539
Score = 40.4 bits (93), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 17/53 (32%), Positives = 27/53 (50%)
Query: 26 DKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKE 78
D+ +V NS++ YC G ME V+ + + I PD T + L+ +CK
Sbjct: 544 DRPTIVTFNSLIDGYCLVGKMEKAFGVLDAMVSVGIEPDVVTNNTLVSGYCKS 596
Score = 38.1 bits (87), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 23/107 (21%), Positives = 45/107 (42%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ CR+ +E L A K+D+ +LN+M+ A + E + +
Sbjct: 659 LLKGLCRNDLTDEAITLFHKLGAMDCKFDITILNTMINALYKVRRREEANDLFAAISTSG 718
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLI 107
+ P+ +T+ ++I+ KE A M + G P L + +I
Sbjct: 719 LVPNVSTYGVMIRNLLKEGSVEEADTMFSSMEKSGCAPSSRLLNDII 765
>gi|297848948|ref|XP_002892355.1| hypothetical protein ARALYDRAFT_311741 [Arabidopsis lyrata subsp.
lyrata]
gi|297338197|gb|EFH68614.1| hypothetical protein ARALYDRAFT_311741 [Arabidopsis lyrata subsp.
lyrata]
Length = 988
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 25/98 (25%), Positives = 52/98 (53%), Gaps = 1/98 (1%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
MI C+ G +E +L E K + +VV +M+ + R G +E+ + ++ ++
Sbjct: 751 MIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGRIGKIETCLELLERMGSKG 810
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQP 98
++P+Y T+ +LI + CK +A+ + +M ++ H P
Sbjct: 811 VAPNYVTYRVLIDHCCKNGALDVAHNLLEEM-KQTHWP 847
>gi|414871539|tpg|DAA50096.1| TPA: ATP binding protein [Zea mays]
Length = 692
Score = 48.9 bits (115), Expect = 7e-04, Method: Composition-based stats.
Identities = 29/110 (26%), Positives = 50/110 (45%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ A CR G F ++ D A+ DV N +L A C G ++ +H++R L
Sbjct: 200 ILEAACRGGGFRSAVRVLEDLHARGCALDVGNCNLVLNAICDQGSVDEALHLLRDLPSFG 259
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHL 110
PD +++ ++K C K + M +M R P ++LI +L
Sbjct: 260 CEPDVVSYNAVLKGLCMAKRWGCVQELMEEMVRMACPPNIVTFNTLISYL 309
Score = 47.8 bits (112), Expect = 0.002, Method: Composition-based stats.
Identities = 26/107 (24%), Positives = 50/107 (46%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+++A C G +E L D + + DVV N++L C V +M ++ +A
Sbjct: 235 VLNAICDQGSVDEALHLLRDLPSFGCEPDVVSYNAVLKGLCMAKRWGCVQELMEEMVRMA 294
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLI 107
P+ TF+ LI Y C+ ++ + + M G P+ + +++I
Sbjct: 295 CPPNIVTFNTLISYLCRNGLFERVHEVLAQMVEHGCTPDIRMYATII 341
Score = 45.1 bits (105), Expect = 0.011, Method: Composition-based stats.
Identities = 25/95 (26%), Positives = 45/95 (47%), Gaps = 3/95 (3%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
M++ +CR+G E ++LA + Y + LCA R D +V+ M +
Sbjct: 133 MVAGYCRAGQLESARRLAAAVPVPPNAYTYFPVVRALCARGRIADALAVLDEMPRRGCAP 192
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKG 95
I P Y H++++ C+ + A R + D+H +G
Sbjct: 193 IPPMY---HVILEAACRGGGFRSAVRVLEDLHARG 224
Score = 42.4 bits (98), Expect = 0.063, Method: Composition-based stats.
Identities = 25/98 (25%), Positives = 48/98 (48%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ C + +EET++L + K D V N ++ +C+ G ++ V+ ++ ++ E
Sbjct: 375 LLKGLCSAERWEETEELLAEMFDKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLEHG 434
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQP 98
PD T+ +I FCKE + A + M G +P
Sbjct: 435 CMPDVITYTTVINGFCKEGLIDEAVMLLKSMTACGCKP 472
Score = 38.9 bits (89), Expect = 0.65, Method: Composition-based stats.
Identities = 35/129 (27%), Positives = 58/129 (44%), Gaps = 6/129 (4%)
Query: 1 MISAFCRSGCFEETKQLAGDFEA---KYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLD 57
+I+ FC+ G +E L A K + ++ LC+ R D E +M M +
Sbjct: 445 VINGFCKEGLIDEAVMLLKSMTACGCKPNTISYTIVLKGLCSAERWVDAEDLMSQMIQ-Q 503
Query: 58 ELAISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHS 117
++P TF+ LI + CK+ + A + M G P+ S++I LGK
Sbjct: 504 GCPLNPI--TFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTD 561
Query: 118 EALSVYNML 126
EAL + N++
Sbjct: 562 EALELLNVM 570
Score = 38.9 bits (89), Expect = 0.81, Method: Composition-based stats.
Identities = 19/70 (27%), Positives = 34/70 (48%)
Query: 29 DVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYMLAYRTM 88
++V N+++ CR G E V V+ ++ E +PD + +I CKE +A+ +
Sbjct: 298 NIVTFNTLISYLCRNGLFERVHEVLAQMVEHGCTPDIRMYATIIDGICKEGHLEVAHEIL 357
Query: 89 VDMHRKGHQP 98
M G +P
Sbjct: 358 NRMPSYGLKP 367
>gi|255559961|ref|XP_002520999.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223539836|gb|EEF41416.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 628
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 26/98 (26%), Positives = 43/98 (43%)
Query: 2 ISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAI 61
+ C++GC E + E +V + NS++ CR+ +E + +L A+
Sbjct: 463 LDGLCKNGCVSEALDVFYGLENCKFASNVAIFNSLINGMCRSEKLEIAWELFNRLCNEAL 522
Query: 62 SPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPE 99
PD T+ I+I CK AY ++M KG P
Sbjct: 523 QPDVVTYTIMIYGLCKVGQPQKAYDLFLEMEEKGCAPN 560
Score = 36.2 bits (82), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 20/77 (25%), Positives = 35/77 (45%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I + C+ G E K+ + + K +VV S+L C + E + ++ +
Sbjct: 259 IIDSLCKDGLVERAKEFFVEMKEKGIFPNVVTYTSLLHGLCSASEWEEAKRLFIEMVDHG 318
Query: 61 ISPDYNTFHILIKYFCK 77
+ PD TF +LI CK
Sbjct: 319 LLPDVVTFSVLIGALCK 335
>gi|357167837|ref|XP_003581356.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15630,
mitochondrial-like [Brachypodium distachyon]
Length = 524
Score = 48.9 bits (115), Expect = 7e-04, Method: Composition-based stats.
Identities = 25/99 (25%), Positives = 53/99 (53%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I A G +ET +L D + + D+ + N+++ ++C GDM+ +M ++++
Sbjct: 330 LIHALSMKGMVQETDRLFNDAVRRGIRPDLFMYNALINSHCTGGDMDRAFEIMGEMEKKR 389
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPE 99
I+PD T++ L++ C A + +M ++G QP+
Sbjct: 390 ITPDDVTYNTLMRGLCLLGRLDEARGLIEEMTKRGIQPD 428
>gi|357502627|ref|XP_003621602.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355496617|gb|AES77820.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 613
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 49/99 (49%)
Query: 32 LLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYMLAYRTMVDM 91
+LNS++C + G + + V +K+ P+ ++LI KE LA++ M
Sbjct: 362 ILNSIICVCAKEGKWDEALSVFQKMLTSDFKPNLVACNVLINSLGKEGELKLAFQVYNTM 421
Query: 92 HRKGHQPEEELCSSLIFHLGKMRAHSEALSVYNMLRYSK 130
G +P+ ++L+ L K H+EAL ++N + S+
Sbjct: 422 KSFGQKPDAYTYNALMSSLNKANKHNEALKIFNRIERSQ 460
>gi|357499681|ref|XP_003620129.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355495144|gb|AES76347.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 543
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 33/120 (27%), Positives = 57/120 (47%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ FC+ G +E K + + K +VV S++ YC ++ ++ + +
Sbjct: 273 LVDGFCKDGKMKEGKTVFAMMMKQGIKPNVVTYCSLMDGYCLVKEVNKAKSILYTMSQRG 332
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
++PD +++ILI FCK K A +MH K P+ +SLI L K+ S AL
Sbjct: 333 VNPDIQSYNILIDGFCKIKKVDEAMNLFKEMHHKHIIPDVVTYNSLIDGLCKLGKISYAL 392
Score = 40.8 bits (94), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 27/127 (21%), Positives = 58/127 (45%), Gaps = 6/127 (4%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C G + + A + D V +++ C+ G+ + + ++R++D
Sbjct: 133 LIKGLCLKGQIHQALLFHDNVVAMGFQLDQVGYGTLIHGLCKVGETRAALDLLRRVDGNL 192
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLI---FHLGKMRAHS 117
+ P+ + +I CK+K A+ +M KG P S+LI F +G+++
Sbjct: 193 VQPNVVMYSTIIDGMCKDKHVNDAFDLYSEMVSKGISPNVVTYSALISGFFTVGQLK--- 249
Query: 118 EALSVYN 124
+A+ ++N
Sbjct: 250 DAIDLFN 256
Score = 38.9 bits (89), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 23/97 (23%), Positives = 44/97 (45%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C+ G +L + + D++ +S+L A C+ ++ + ++ KL +
Sbjct: 378 LIDGLCKLGKISYALKLVDEMHDRGVPPDIITYSSILDALCKNHQVDKAIALLTKLKDQG 437
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQ 97
I P+ T+ ILI CK A+ D+ KG+
Sbjct: 438 IRPNMYTYTILIDGLCKGGRLEDAHNIFEDLLVKGYN 474
Score = 38.9 bits (89), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 21/99 (21%), Positives = 44/99 (44%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I FC+ +E L + K+ DVV NS++ C+ G + + ++ ++ +
Sbjct: 343 LIDGFCKIKKVDEAMNLFKEMHHKHIIPDVVTYNSLIDGLCKLGKISYALKLVDEMHDRG 402
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPE 99
+ PD T+ ++ CK A + + +G +P
Sbjct: 403 VPPDIITYSSILDALCKNHQVDKAIALLTKLKDQGIRPN 441
Score = 37.0 bits (84), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 28/123 (22%), Positives = 55/123 (44%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+IS F G ++ L + K DV N ++ +C+ G M+ V + +
Sbjct: 238 LISGFFTVGQLKDAIDLFNKMILENIKPDVYTFNILVDGFCKDGKMKEGKTVFAMMMKQG 297
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
I P+ T+ L+ +C K A + M ++G P+ + + LI K++ EA+
Sbjct: 298 IKPNVVTYCSLMDGYCLVKEVNKAKSILYTMSQRGVNPDIQSYNILIDGFCKIKKVDEAM 357
Query: 121 SVY 123
+++
Sbjct: 358 NLF 360
Score = 36.6 bits (83), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 21/99 (21%), Positives = 43/99 (43%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C+ + L + +K +VV ++++ + G ++ + + K+
Sbjct: 203 IIDGMCKDKHVNDAFDLYSEMVSKGISPNVVTYSALISGFFTVGQLKDAIDLFNKMILEN 262
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPE 99
I PD TF+IL+ FCK+ M ++G +P
Sbjct: 263 IKPDVYTFNILVDGFCKDGKMKEGKTVFAMMMKQGIKPN 301
Score = 36.2 bits (82), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 23/99 (23%), Positives = 49/99 (49%)
Query: 29 DVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYMLAYRTM 88
D+ N ++ +C+ ++ M++ +++ I PD T++ LI CK A + +
Sbjct: 336 DIQSYNILIDGFCKIKKVDEAMNLFKEMHHKHIIPDVVTYNSLIDGLCKLGKISYALKLV 395
Query: 89 VDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVYNMLR 127
+MH +G P+ SS++ L K +A+++ L+
Sbjct: 396 DEMHDRGVPPDIITYSSILDALCKNHQVDKAIALLTKLK 434
>gi|297790927|ref|XP_002863348.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297309183|gb|EFH39607.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 477
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 31/112 (27%), Positives = 61/112 (54%), Gaps = 6/112 (5%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYD-KYDVVLLNSMLCAYCRTGDMESVMHVMRKLDEL 59
MI+ +C +G +E +LA + +K+D + V + +L C++GDME+ + ++ ++++
Sbjct: 206 MINGYCNAGKIDEAWKLAKEM-SKHDCVLNTVTYSRILEGVCKSGDMETALELLAEMEKE 264
Query: 60 A----ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLI 107
ISP+ T+ ++I+ FC++K A + M +G P S LI
Sbjct: 265 DGGGLISPNAVTYTLVIQSFCEKKRIREALLVLDRMGDRGCTPNRVTASVLI 316
>gi|388490582|gb|AFK33357.1| unknown [Medicago truncatula]
Length = 389
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 45/98 (45%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I A + +E +L D AK K ++V N +L C+ G E + + ++L E
Sbjct: 30 LIEAAYKERGVDEAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEDAIKLFKELPEKG 89
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQP 98
P + +IL++ C E + AY M M R G P
Sbjct: 90 FKPCVVSHNILLRSLCYEGRWDEAYELMAGMDRDGQAP 127
>gi|357167657|ref|XP_003581270.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g06000-like [Brachypodium distachyon]
Length = 560
Score = 48.9 bits (115), Expect = 8e-04, Method: Composition-based stats.
Identities = 33/120 (27%), Positives = 53/120 (44%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+IS +C+SG E+ + D + V N ++ Y + G+M S + V +++
Sbjct: 305 VISGYCKSGRMEDAMAVYNDMIGCGTTPNAVTYNVLINGYGKAGNMGSAVAVYQQMILRR 364
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
PD TF LI +C+ A RT +M + QP S +I K +EAL
Sbjct: 365 CPPDVVTFSTLIDGYCRCGQLDDAMRTWTEMSQYQIQPNAHTFSIIILSFCKQNRSAEAL 424
Score = 38.5 bits (88), Expect = 0.93, Method: Composition-based stats.
Identities = 25/97 (25%), Positives = 44/97 (45%), Gaps = 1/97 (1%)
Query: 29 DVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYMLAYRTM 88
DV N + C+ GD++ + ++ ++ E SPD T +IL+ C+ K +
Sbjct: 227 DVWSFNVAIKGVCQVGDVQKALELVERMAEFGCSPDTVTNNILVGGLCRVKEVSRGREVL 286
Query: 89 VDMHRKG-HQPEEELCSSLIFHLGKMRAHSEALSVYN 124
+ R G P +S+I K +A++VYN
Sbjct: 287 RRLQRDGVCMPNVVTYTSVISGYCKSGRMEDAMAVYN 323
>gi|334182516|ref|NP_172730.3| helicase domain and pentatricopeptide repeat-containing protein
[Arabidopsis thaliana]
gi|332190794|gb|AEE28915.1| helicase domain and pentatricopeptide repeat-containing protein
[Arabidopsis thaliana]
Length = 735
Score = 48.9 bits (115), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 27/99 (27%), Positives = 44/99 (44%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I + CR GC + L + E K K VV NS++ C+ G +++ +
Sbjct: 234 IIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSRE 293
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPE 99
I P+ TF++L+ F KE A +M +G P
Sbjct: 294 IVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPN 332
Score = 42.7 bits (99), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 29/127 (22%), Positives = 57/127 (44%)
Query: 29 DVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYMLAYRTM 88
D+V S++ YC ++ M V R + + + + T+ IL++ FC+ LA
Sbjct: 367 DIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELF 426
Query: 89 VDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVYNMLRYSKRSMCKALHEKILHILISG 148
+M G P+ L+ L +AL ++ L+ SK + ++ I+ + G
Sbjct: 427 QEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKG 486
Query: 149 KLLKDAY 155
++DA+
Sbjct: 487 GKVEDAW 493
Score = 42.4 bits (98), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 41/84 (48%)
Query: 29 DVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYMLAYRTM 88
DVV NS++ CR+GD + ++RK++E + D T+ +I C++ A
Sbjct: 192 DVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLF 251
Query: 89 VDMHRKGHQPEEELCSSLIFHLGK 112
+M KG + +SL+ L K
Sbjct: 252 KEMETKGIKSSVVTYNSLVRGLCK 275
Score = 35.4 bits (80), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 21/107 (19%), Positives = 49/107 (45%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ C++G + + L D ++ +V+ N +L + + G ++ + +++
Sbjct: 269 LVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRG 328
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLI 107
ISP+ T++ L+ +C + A + M R P+ +SLI
Sbjct: 329 ISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLI 375
>gi|242060055|ref|XP_002459173.1| hypothetical protein SORBIDRAFT_03g047260 [Sorghum bicolor]
gi|241931148|gb|EES04293.1| hypothetical protein SORBIDRAFT_03g047260 [Sorghum bicolor]
Length = 574
Score = 48.9 bits (115), Expect = 8e-04, Method: Composition-based stats.
Identities = 28/131 (21%), Positives = 61/131 (46%), Gaps = 1/131 (0%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ C++G E+ +++ + EA+ D+ ++ YC GD++ + ++ E
Sbjct: 357 LVYGLCKAGKLEDARKVLDEMEAEGCVPDLKTWTLLIQGYCSAGDVDRAVQYFTEMIEKG 416
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGH-QPEEELCSSLIFHLGKMRAHSEA 119
+ D + +++K C + AY V+M K +P + C LI L ++ EA
Sbjct: 417 LDADADLLDVILKGLCSHEKVEEAYSLFVEMVDKAELRPFQGTCQRLIGDLLRVNKLEEA 476
Query: 120 LSVYNMLRYSK 130
L++ ++ K
Sbjct: 477 LALLKTMKTCK 487
Score = 39.3 bits (90), Expect = 0.56, Method: Composition-based stats.
Identities = 25/120 (20%), Positives = 52/120 (43%)
Query: 4 AFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISP 63
A +G F+E ++ + + D V + ++ C+ G +E V+ +++ P
Sbjct: 325 ALTSNGKFDEAAEIVQTMRDQGHQPDNVTYSQLVYGLCKAGKLEDARKVLDEMEAEGCVP 384
Query: 64 DYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVY 123
D T+ +LI+ +C A + +M KG + +L ++ L EA S++
Sbjct: 385 DLKTWTLLIQGYCSAGDVDRAVQYFTEMIEKGLDADADLLDVILKGLCSHEKVEEAYSLF 444
>gi|357484175|ref|XP_003612374.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355513709|gb|AES95332.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 620
Score = 48.9 bits (115), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 23/95 (24%), Positives = 47/95 (49%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ C +G E ++ E+ D V N+++ +C G ++ +H +++++
Sbjct: 284 VVEILCNAGRVTEAAEVLERVESLGGSLDAVAYNTLIKGFCGVGKVKVGLHFLKQMENKG 343
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKG 95
P+ +T++ILI FC+ +M LA DM G
Sbjct: 344 YLPNVDTYNILIYGFCESRMLDLALDLFNDMKTDG 378
Score = 40.0 bits (92), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 27/131 (20%), Positives = 58/131 (44%)
Query: 29 DVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYMLAYRTM 88
DVV + ++ C G + V+ +++ L S D ++ LIK FC + +
Sbjct: 277 DVVTVTKVVEILCNAGRVTEAAEVLERVESLGGSLDAVAYNTLIKGFCGVGKVKVGLHFL 336
Query: 89 VDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVYNMLRYSKRSMCKALHEKILHILISG 148
M KG+ P + + LI+ + R AL ++N ++ + + ++ L S
Sbjct: 337 KQMENKGYLPNVDTYNILIYGFCESRMLDLALDLFNDMKTDGINRNFVTFDTMIRGLCSE 396
Query: 149 KLLKDAYIVVK 159
++D + +++
Sbjct: 397 GRIEDGFSILE 407
Score = 39.7 bits (91), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 26/118 (22%), Positives = 54/118 (45%)
Query: 6 CRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDY 65
C+ G E+ K + + +++ NS++ + + G + + ++ ++ P
Sbjct: 464 CKEGAIEDAKNIYDKMIDEGGIPSILVYNSLVHGFSQHGSIREAVELINEMISNNCFPIA 523
Query: 66 NTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVY 123
+TF+ +I FC++ A + M D+ +G P E S LI L + +AL V+
Sbjct: 524 STFNAIITEFCEQGKIESALKFMEDITARGCVPNTETYSPLIDVLCRKGDIQKALQVF 581
Score = 38.1 bits (87), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 20/100 (20%), Positives = 42/100 (42%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ F + G E +L + + N+++ +C G +ES + M +
Sbjct: 494 LVHGFSQHGSIREAVELINEMISNNCFPIASTFNAIITEFCEQGKIESALKFMEDITARG 553
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEE 100
P+ T+ LI C++ A + ++M KG P++
Sbjct: 554 CVPNTETYSPLIDVLCRKGDIQKALQVFLEMVEKGILPDQ 593
>gi|449444522|ref|XP_004140023.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g79540-like [Cucumis sativus]
Length = 783
Score = 48.9 bits (115), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 34/139 (24%), Positives = 62/139 (44%), Gaps = 13/139 (9%)
Query: 1 MISAFCRSGCFEETKQLAGDFE------------AKYDK-YDVVLLNSMLCAYCRTGDME 47
+I+ C++ EE + L E DK +D+ L M+ C +G +
Sbjct: 449 LINGLCKANRLEEARLLFYQMEIVRKPSLFLRLSQGTDKVFDIASLQVMMERLCESGMIL 508
Query: 48 SVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLI 107
++ +L + + PD T++ILI FCK A++ +M KGH P+ +LI
Sbjct: 509 KAYKLLMQLVDSGVLPDIRTYNILINGFCKFGNINGAFKLFKEMQLKGHMPDSVTYGTLI 568
Query: 108 FHLGKMRAHSEALSVYNML 126
L + + +AL ++ +
Sbjct: 569 DGLYRAGRNEDALEIFEQM 587
Score = 36.6 bits (83), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 33/134 (24%), Positives = 56/134 (41%), Gaps = 1/134 (0%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
MI + G E L G+ + + D + N+++ +C G ++ + ++ +
Sbjct: 344 MIRGLSQEGRVTEALTLLGEMTERGLRPDTICYNALIKGFCDMGYLDEAESLRLEISKHD 403
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEA- 119
P+ +T+ ILI CK + A +M + G P +SLI L K EA
Sbjct: 404 CFPNNHTYSILICGMCKNGLINKAQHIFKEMEKLGCLPSVVTFNSLINGLCKANRLEEAR 463
Query: 120 LSVYNMLRYSKRSM 133
L Y M K S+
Sbjct: 464 LLFYQMEIVRKPSL 477
>gi|78708657|gb|ABB47632.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica Group]
Length = 1080
Score = 48.9 bits (115), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 42/86 (48%)
Query: 41 CRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEE 100
C+ G + + R+L E+ + PD T+++LI K K A +M +KG P
Sbjct: 941 CKAGQLNDGLTYFRQLLEMGLEPDLITYNLLIDGLGKSKRLEEAVSLFNEMQKKGIVPNL 1000
Query: 101 ELCSSLIFHLGKMRAHSEALSVYNML 126
+SLI HLGK +EA +Y L
Sbjct: 1001 YTYNSLILHLGKAGKAAEAGKMYEEL 1026
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 37/155 (23%), Positives = 76/155 (49%), Gaps = 11/155 (7%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ ++G E+ + L + K + + N +L + G+ E V H+ + + +
Sbjct: 866 LLDGLLKAGRIEDAENLFNEMLEYGCKANCTIYNILLNGHRIAGNTEKVCHLFQDMVDQG 925
Query: 61 ISPDYNTFHILIKYFCKEKMY---MLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHS 117
I+PD ++ I+I CK + +R +++M G +P+ + LI LGK +
Sbjct: 926 INPDIKSYTIIIDTLCKAGQLNDGLTYFRQLLEM---GLEPDLITYNLLIDGLGKSKRLE 982
Query: 118 EALSVYNMLRYSKRSMCKAL---HEKILHILISGK 149
EA+S++N ++ K+ + L + ILH+ +GK
Sbjct: 983 EAVSLFNEMQ--KKGIVPNLYTYNSLILHLGKAGK 1015
Score = 40.4 bits (93), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 22/90 (24%), Positives = 45/90 (50%)
Query: 34 NSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHR 93
N++L R G ++ VMH++ ++ P+ T++ ++ CK A + M
Sbjct: 549 NTLLAGLGREGKVKEVMHLLEEMYHSNYPPNLITYNTILDCLCKNGAVNDALDMLYSMTT 608
Query: 94 KGHQPEEELCSSLIFHLGKMRAHSEALSVY 123
KG P+ +++I+ L K ++EA S++
Sbjct: 609 KGCIPDLSSYNTVIYGLVKEERYNEAFSIF 638
Score = 38.9 bits (89), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 27/99 (27%), Positives = 45/99 (45%)
Query: 29 DVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYMLAYRTM 88
DVV N++L ++G + V +L + +SPD T+ ++IK K + A +
Sbjct: 439 DVVAGNAVLFGLAKSGRLGMAKRVFHELKAMGVSPDTITYTMMIKCCSKASKFDEAVKIF 498
Query: 89 VDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVYNMLR 127
DM P+ +SLI L K EA ++ L+
Sbjct: 499 YDMIENNCVPDVLAVNSLIDTLYKAGRGDEAWRIFYQLK 537
Score = 38.9 bits (89), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 33/154 (21%), Positives = 64/154 (41%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C+ E +L F++ L NS++C ++ + ++ EL
Sbjct: 726 LIKHLCKQKKALEAHELVKKFKSFGVSLKTGLYNSLICGLVDENLIDIAEGLFAEMKELG 785
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
PD T+++L+ K + +MHRKG++ +++I L K R +A+
Sbjct: 786 CGPDEFTYNLLLDAMGKSMRIEEMLKVQEEMHRKGYESTYVTYNTIISGLVKSRRLEQAI 845
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLKDA 154
+Y L S + +L L+ ++DA
Sbjct: 846 DLYYNLMSQGFSPTPCTYGPLLDGLLKAGRIEDA 879
Score = 38.5 bits (88), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 15/64 (23%), Positives = 38/64 (59%)
Query: 36 MLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKG 95
++ A+ + D+E+V+ ++R+++ + P+ ++ I I+ + K + AYR + M +G
Sbjct: 201 LMVAFGKRRDVETVLWLLREMEAHGVKPNVYSYTICIRVLGQAKRFDEAYRILAKMENEG 260
Query: 96 HQPE 99
+P+
Sbjct: 261 CKPD 264
Score = 37.0 bits (84), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 27/123 (21%), Positives = 50/123 (40%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C +G + K + + K D V ++L + GD +SVM + +
Sbjct: 271 LIQVLCDAGRISDAKDVFWKMKKSDQKPDRVTYITLLDKFGDNGDSQSVMEIWNAMKADG 330
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ + + +I C+ A +M +KG PE+ +SLI K +AL
Sbjct: 331 YNDNVVAYTAVIDALCQVGRVFEALEMFDEMKQKGIVPEQYSYNSLISGFLKADRFGDAL 390
Query: 121 SVY 123
++
Sbjct: 391 ELF 393
>gi|147817754|emb|CAN66662.1| hypothetical protein VITISV_031722 [Vitis vinifera]
Length = 1060
Score = 48.9 bits (115), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 64/158 (40%), Gaps = 9/158 (5%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C EE L + + K + V N+++ YC+ G+ME + V ++ E
Sbjct: 374 LIKGLCGVDRMEEADGLLQEMKKKGFLPNAVTYNTLIDGYCKEGNMEKAIEVCSQMTEKG 433
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
I P+ TF LI +CK A +M KG P+ ++LI H +
Sbjct: 434 IEPNIITFSTLIDGYCKAGKMEAAMGLYTEMVIKGLLPDVVAYTALI------DGHFKDG 487
Query: 121 SVYNMLRYSKRSMCKALHEKI--LHILISGKLLKDAYI 156
+ R K LH + L LI G L KD I
Sbjct: 488 NTKEAFRLHKEMQEAGLHPNVFTLSCLIDG-LCKDGRI 524
Score = 43.9 bits (102), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 28/123 (22%), Positives = 56/123 (45%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I +C+ G E+ ++ K + +++ ++++ YC+ G ME+ M + ++
Sbjct: 409 LIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCKAGKMEAAMGLYTEMVIKG 468
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ PD + LI K+ A+R +M G P S LI L K S+A+
Sbjct: 469 LLPDVVAYTALIDGHFKDGNTKEAFRLHKEMQEAGLHPNVFTLSCLIDGLCKDGRISDAI 528
Query: 121 SVY 123
++
Sbjct: 529 KLF 531
Score = 40.0 bits (92), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 29/124 (23%), Positives = 51/124 (41%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I +C++G E L + E DV + ++ C ME +++++ +
Sbjct: 339 LIDGYCKAGNLSEALSLHSEIEKHEILPDVFTYSILIKGLCGVDRMEEADGLLQEMKKKG 398
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
P+ T++ LI +CKE A M KG +P S+LI K A+
Sbjct: 399 FLPNAVTYNTLIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCKAGKMEAAM 458
Query: 121 SVYN 124
+Y
Sbjct: 459 GLYT 462
Score = 38.9 bits (89), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 23/107 (21%), Positives = 49/107 (45%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C++ ++ D + ++ + N ++ YC+ G++ + + ++++
Sbjct: 304 LIDGLCKTDEMVSARKFLIDMASFGVVPNIFVYNCLIDGYCKAGNLSEALSLHSEIEKHE 363
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLI 107
I PD T+ ILIK C A + +M +KG P ++LI
Sbjct: 364 ILPDVFTYSILIKGLCGVDRMEEADGLLQEMKKKGFLPNAVTYNTLI 410
Score = 37.4 bits (85), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 45/91 (49%)
Query: 34 NSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHR 93
N+M+ YC+ ++ + + ++ + P+ TF ILI CK + A + ++DM
Sbjct: 267 NTMMDGYCKIAHVKKALELYXEMLGDGLLPNVVTFGILIDGLCKTDEMVSARKFLIDMAS 326
Query: 94 KGHQPEEELCSSLIFHLGKMRAHSEALSVYN 124
G P + + LI K SEALS+++
Sbjct: 327 FGVVPNIFVYNCLIDGYCKAGNLSEALSLHS 357
Score = 37.4 bits (85), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 23/99 (23%), Positives = 39/99 (39%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ + G F+ ++ GD A+ +VV +++ CR GD + ++ E
Sbjct: 164 VLDGLVKKGRFDTMWKVYGDMVARGASPNVVTYGTLIDGCCRQGDFLKAFRLFDEMIEKK 223
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPE 99
I P + ILI+ C E A M G P
Sbjct: 224 IFPTVVIYTILIRGLCGESRISEAESMFRTMRNSGMLPN 262
>gi|115446945|ref|NP_001047252.1| Os02g0582300 [Oryza sativa Japonica Group]
gi|50253069|dbj|BAD29317.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|113536783|dbj|BAF09166.1| Os02g0582300 [Oryza sativa Japonica Group]
Length = 845
Score = 48.9 bits (115), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 34/121 (28%), Positives = 51/121 (42%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C G E +L E D N+++ A C+ G + + L+
Sbjct: 400 LIRGQCIDGHIESAFRLLRLMEGDGLIADQYTYNALINALCKDGRTDQACSLFDSLETRG 459
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
I P+ TF+ LI CK +A++ + M G P+ SS I HL KM+ E L
Sbjct: 460 IKPNAVTFNSLINGLCKSGKADIAWKFLEKMVSAGCTPDTYTYSSFIEHLCKMKGSQEGL 519
Query: 121 S 121
S
Sbjct: 520 S 520
Score = 43.5 bits (101), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 28/127 (22%), Positives = 59/127 (46%), Gaps = 4/127 (3%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C +G +E +L G+ D+ D+ + +++ C E + ++R++ EL
Sbjct: 229 LIEGLCEAGRIDEAVELFGEM----DQPDMHMYAALVKGLCNAERGEEGLLMLRRMKELG 284
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
P + ++ + C+E+ A + +M KG P C+++I K S+AL
Sbjct: 285 WRPSTRAYAAVVDFRCRERKAKEAEEMLQEMFEKGLAPCVVTCTAVINAYCKEGRMSDAL 344
Query: 121 SVYNMLR 127
V +++
Sbjct: 345 RVLELMK 351
Score = 43.1 bits (100), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 23/98 (23%), Positives = 45/98 (45%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+A C+ G ++ L E + K + V NS++ C++G + + K+
Sbjct: 435 LINALCKDGRTDQACSLFDSLETRGIKPNAVTFNSLINGLCKSGKADIAWKFLEKMVSAG 494
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQP 98
+PD T+ I++ CK K + +M +K +P
Sbjct: 495 CTPDTYTYSSFIEHLCKMKGSQEGLSFIGEMLQKDVKP 532
Score = 42.4 bits (98), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 28/126 (22%), Positives = 63/126 (50%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+A+C+ G + ++ + + K +V N+++ +C G + M ++ K+
Sbjct: 330 VINAYCKEGRMSDALRVLELMKLRGCKPNVWTYNALVQGFCNEGKVHKAMTLLNKMRACG 389
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
++PD T+++LI+ C + A+R + M G ++ ++LI L K +A
Sbjct: 390 VNPDAVTYNLLIRGQCIDGHIESAFRLLRLMEGDGLIADQYTYNALINALCKDGRTDQAC 449
Query: 121 SVYNML 126
S+++ L
Sbjct: 450 SLFDSL 455
Score = 37.4 bits (85), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 27/112 (24%), Positives = 45/112 (40%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ FC G + L A D V N ++ C G +ES ++R ++
Sbjct: 365 LVQGFCNEGKVHKAMTLLNKMRACGVNPDAVTYNLLIRGQCIDGHIESAFRLLRLMEGDG 424
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGK 112
+ D T++ LI CK+ A + +G +P +SLI L K
Sbjct: 425 LIADQYTYNALINALCKDGRTDQACSLFDSLETRGIKPNAVTFNSLINGLCK 476
>gi|356530056|ref|XP_003533600.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62670,
mitochondrial-like [Glycine max]
Length = 694
Score = 48.9 bits (115), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 31/122 (25%), Positives = 57/122 (46%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I A C+ G +E K L G + K +VV ++++ YC G++ + + + +
Sbjct: 348 LIDALCKEGKLKEAKNLLGVMTKEGVKPNVVTYSTLMDGYCLVGEVHNAKQIFHAMVQTE 407
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
++P +++I+I CK K A + +M K P +SLI L K + AL
Sbjct: 408 VNPSVCSYNIMINGLCKGKSVDEAMNLLREMLHKNVVPNTVTYNSLIDGLCKSGRITSAL 467
Query: 121 SV 122
+
Sbjct: 468 DL 469
Score = 44.3 bits (103), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 24/107 (22%), Positives = 48/107 (44%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C+ E + ++ DV+ ++++C +C G + ++ ++
Sbjct: 278 IIDGLCKDKLVNEAYDFYTEMNSRGIFPDVITYSTLICGFCLAGQLMGAFSLLNEMTLKN 337
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLI 107
I+PD T+ ILI CKE A + M ++G +P S+L+
Sbjct: 338 INPDVYTYTILIDALCKEGKLKEAKNLLGVMTKEGVKPNVVTYSTLM 384
Score = 41.6 bits (96), Expect = 0.100, Method: Compositional matrix adjust.
Identities = 26/107 (24%), Positives = 48/107 (44%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
MI+ C+ +E L + K + V NS++ C++G + S + +M++L
Sbjct: 418 MINGLCKGKSVDEAMNLLREMLHKNVVPNTVTYNSLIDGLCKSGRITSALDLMKELHHRG 477
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLI 107
D T+ L+ CK + A + M +G QP + ++LI
Sbjct: 478 QPADVITYTSLLDGLCKNQNLDKAIALFMKMKERGIQPNKYTYTALI 524
Score = 39.3 bits (90), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 22/107 (20%), Positives = 51/107 (47%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ C G +++ A+ + + V ++L C+ G+ + ++R +++ +
Sbjct: 208 LMKGLCLKGEVKKSLHFHDKVVAQGFQMNQVSYGTLLNGLCKIGETRCAIKLLRMIEDRS 267
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLI 107
PD ++ +I CK+K+ AY +M+ +G P+ S+LI
Sbjct: 268 TRPDVVMYNTIIDGLCKDKLVNEAYDFYTEMNSRGIFPDVITYSTLI 314
Score = 35.8 bits (81), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 29/125 (23%), Positives = 53/125 (42%), Gaps = 3/125 (2%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+++ C+ G +L E + + DVV+ N+++ C+ + +++
Sbjct: 243 LLNGLCKIGETRCAIKLLRMIEDRSTRPDVVMYNTIIDGLCKDKLVNEAYDFYTEMNSRG 302
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHL---GKMRAHS 117
I PD T+ LI FC M A+ + +M K P+ + LI L GK++
Sbjct: 303 IFPDVITYSTLICGFCLAGQLMGAFSLLNEMTLKNINPDVYTYTILIDALCKEGKLKEAK 362
Query: 118 EALSV 122
L V
Sbjct: 363 NLLGV 367
>gi|242070261|ref|XP_002450407.1| hypothetical protein SORBIDRAFT_05g004830 [Sorghum bicolor]
gi|241936250|gb|EES09395.1| hypothetical protein SORBIDRAFT_05g004830 [Sorghum bicolor]
Length = 462
Score = 48.9 bits (115), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 34/154 (22%), Positives = 67/154 (43%)
Query: 2 ISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAI 61
++A CR G + + + D DVV N++L A+CR +++ + V+ ++ E +
Sbjct: 19 LAALCRGGWLDRAESVVVDAIRLGLPPDVVTYNTLLAAHCRVAGLDAGIAVVHRMREAGV 78
Query: 62 SPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEALS 121
PD T++ LI + + + A +M R G P+ ++L+ L + A
Sbjct: 79 RPDAVTYNSLITGADRSGLTVRALDLFDEMLRSGVAPDSWSYNALMHCLFRSGHPEHAYR 138
Query: 122 VYNMLRYSKRSMCKALHEKILHILISGKLLKDAY 155
V+ + + C + +L L +AY
Sbjct: 139 VFADMADKGVAPCATTYNTLLDGLFKAGHATNAY 172
>gi|148907853|gb|ABR17050.1| unknown [Picea sitchensis]
gi|224284228|gb|ACN39850.1| unknown [Picea sitchensis]
Length = 420
Score = 48.9 bits (115), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 32/127 (25%), Positives = 57/127 (44%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C+ G F E L + A + DVV+ NS++ C+ G+++ + + E
Sbjct: 274 LIHGLCQKGSFLEAAVLLNEMVAIGCELDVVIYNSLIDGLCKMGELDFAREMQILMVEKG 333
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
++PD T+ LI+ C + A M +M KG P ++LI + AL
Sbjct: 334 VAPDVFTYTSLIQGLCDAGLLDEALGLMQEMRAKGIVPNSVTYTTLINGFTQADRTDHAL 393
Query: 121 SVYNMLR 127
+ N ++
Sbjct: 394 QLVNEMK 400
Score = 45.1 bits (105), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 21/79 (26%), Positives = 39/79 (49%)
Query: 29 DVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYMLAYRTM 88
DV+ + + C+ G + M + R+++E +PD T++ILI CK+ + M
Sbjct: 90 DVISYSRKINGLCKKGQIAEAMEIFREMEEKGSAPDSFTYNILINGLCKDAQLEMGVSLM 149
Query: 89 VDMHRKGHQPEEELCSSLI 107
+M +G P ++LI
Sbjct: 150 DEMQARGFSPTVVTYTTLI 168
Score = 39.7 bits (91), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 25/109 (22%), Positives = 44/109 (40%)
Query: 2 ISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAI 61
I+ C+ G E ++ + E K D N ++ C+ +E + +M ++
Sbjct: 98 INGLCKKGQIAEAMEIFREMEEKGSAPDSFTYNILINGLCKDAQLEMGVSLMDEMQARGF 157
Query: 62 SPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHL 110
SP T+ LI FC A + +M +G P ++LI L
Sbjct: 158 SPTVVTYTTLIHGFCTAGRVDAAMDILDEMEHRGITPNTVTYTALIQGL 206
Score = 37.7 bits (86), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 19/97 (19%), Positives = 46/97 (47%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ C+ E L + +A+ VV +++ +C G +++ M ++ +++
Sbjct: 132 LINGLCKDAQLEMGVSLMDEMQARGFSPTVVTYTTLIHGFCTAGRVDAAMDILDEMEHRG 191
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQ 97
I+P+ T+ LI+ C A + +M +G++
Sbjct: 192 ITPNTVTYTALIQGLCDCGEVERAILVLKEMKLRGNE 228
>gi|449457967|ref|XP_004146719.1| PREDICTED: pentatricopeptide repeat-containing protein At4g30825,
chloroplastic-like [Cucumis sativus]
Length = 894
Score = 48.9 bits (115), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 25/118 (21%), Positives = 57/118 (48%), Gaps = 4/118 (3%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
M++A+C+ G EE + + E +++ N+++ Y + +M++ + +
Sbjct: 310 MLNAYCQQGKMEEAELVFASMEEAGFSSNIIAYNTLITGYGKASNMDTAQRLFLGIKNSG 369
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSE 118
+ PD T+ +I+ + + Y +A ++ R+G+ P SS +F L ++A E
Sbjct: 370 VEPDETTYRSMIEGWGRAGNYKMAEWYYKELKRRGYMPN----SSNLFTLINLQAKHE 423
>gi|224080303|ref|XP_002306089.1| predicted protein [Populus trichocarpa]
gi|222849053|gb|EEE86600.1| predicted protein [Populus trichocarpa]
Length = 677
Score = 48.9 bits (115), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 55/114 (48%), Gaps = 4/114 (3%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I + + GCF+E Q+ E + +D+V N+M+ AYCR GDME + + + EL
Sbjct: 164 LIDMYSKCGCFKEACQVFKGCE-REGGFDLVSKNAMVAAYCREGDMEMALRLFWRESELN 222
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMR 114
S +NT LI + + + A + V M G + E S++ +R
Sbjct: 223 DSVSWNT---LISGYVQNGYPVEALKLFVCMGENGVKWNEHTFGSVLSACADLR 273
>gi|356529499|ref|XP_003533328.1| PREDICTED: pentatricopeptide repeat-containing protein At1g12775,
mitochondrial-like [Glycine max]
Length = 447
Score = 48.5 bits (114), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 42/161 (26%), Positives = 69/161 (42%), Gaps = 7/161 (4%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I A C+ E L + K DVV N+++ +C G ++ + ++ +
Sbjct: 204 IIDALCKYQLVSEAYGLFSEMTVKGISADVVTYNTLIYGFCIVGKLKEAIGLLNVMVLKT 263
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYR------TMVDMHRKGHQPEEELC-SSLIFHLGKM 113
I+PD T+ IL+ CKE A R ++D R QP + + SSLI L K
Sbjct: 264 INPDVYTYTILVDALCKEGKVKEAKRRISYVWDLIDEMRDRGQPADVITYSSLIDGLCKN 323
Query: 114 RAHSEALSVYNMLRYSKRSMCKALHEKILHILISGKLLKDA 154
A++++N ++ +L L G LKDA
Sbjct: 324 GHLDRAIALFNKMKDQGIRPNMFTFTILLDGLWKGGRLKDA 364
Score = 40.4 bits (93), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 25/126 (19%), Positives = 55/126 (43%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C G ++ A+ + + V +++ C+ GD + + +++K+D
Sbjct: 134 LIKGLCLKGQVKKALHFHDKLLAQGFQLNQVGYGTLINGVCKIGDTRAAIKLLKKIDGRL 193
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
PD + +I CK ++ AY +M KG + ++LI+ + EA+
Sbjct: 194 TKPDVVMYSTIIDALCKYQLVSEAYGLFSEMTVKGISADVVTYNTLIYGFCIVGKLKEAI 253
Query: 121 SVYNML 126
+ N++
Sbjct: 254 GLLNVM 259
Score = 38.9 bits (89), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 23/103 (22%), Positives = 45/103 (43%), Gaps = 7/103 (6%)
Query: 1 MISAFCRSGCFEETKQ-------LAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVM 53
++ A C+ G +E K+ L + + DV+ +S++ C+ G ++ + +
Sbjct: 274 LVDALCKEGKVKEAKRRISYVWDLIDEMRDRGQPADVITYSSLIDGLCKNGHLDRAIALF 333
Query: 54 RKLDELAISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGH 96
K+ + I P+ TF IL+ K A D+ KG+
Sbjct: 334 NKMKDQGIRPNMFTFTILLDGLWKGGRLKDAQEVFQDLLTKGY 376
>gi|193806393|sp|P0C7Q7.1|PPR38_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial; Flags: Precursor
Length = 602
Score = 48.5 bits (114), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 27/99 (27%), Positives = 44/99 (44%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I + CR GC + L + E K K VV NS++ C+ G +++ +
Sbjct: 234 IIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSRE 293
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPE 99
I P+ TF++L+ F KE A +M +G P
Sbjct: 294 IVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPN 332
Score = 43.5 bits (101), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 29/127 (22%), Positives = 57/127 (44%)
Query: 29 DVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYMLAYRTM 88
D+V S++ YC ++ M V R + + + + T+ IL++ FC+ LA
Sbjct: 367 DIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELF 426
Query: 89 VDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVYNMLRYSKRSMCKALHEKILHILISG 148
+M G P+ L+ L +AL ++ L+ SK + ++ I+ + G
Sbjct: 427 QEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKG 486
Query: 149 KLLKDAY 155
++DA+
Sbjct: 487 GKVEDAW 493
Score = 42.7 bits (99), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 24/91 (26%), Positives = 43/91 (47%)
Query: 29 DVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYMLAYRTM 88
DVV NS++ CR+GD + ++RK++E + D T+ +I C++ A
Sbjct: 192 DVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLF 251
Query: 89 VDMHRKGHQPEEELCSSLIFHLGKMRAHSEA 119
+M KG + +SL+ L K ++
Sbjct: 252 KEMETKGIKSSVVTYNSLVRGLCKAGKWNDG 282
Score = 35.4 bits (80), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 25/133 (18%), Positives = 60/133 (45%), Gaps = 2/133 (1%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ C++G + + L D ++ +V+ N +L + + G ++ + +++
Sbjct: 269 LVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRG 328
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
ISP+ T++ L+ +C + A + M R P+ +SLI ++ + +
Sbjct: 329 ISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGM 388
Query: 121 SVYNMLRYSKRSM 133
V+ + SKR +
Sbjct: 389 KVFRNI--SKRGL 399
>gi|9502386|gb|AAF88093.1|AC025417_21 T12C24.22 [Arabidopsis thaliana]
Length = 1245
Score = 48.5 bits (114), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 27/99 (27%), Positives = 44/99 (44%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I + CR GC + L + E K K VV NS++ C+ G +++ +
Sbjct: 224 IIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSRE 283
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPE 99
I P+ TF++L+ F KE A +M +G P
Sbjct: 284 IVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPN 322
Score = 42.7 bits (99), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 29/127 (22%), Positives = 57/127 (44%)
Query: 29 DVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYMLAYRTM 88
D+V S++ YC ++ M V R + + + + T+ IL++ FC+ LA
Sbjct: 357 DIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELF 416
Query: 89 VDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVYNMLRYSKRSMCKALHEKILHILISG 148
+M G P+ L+ L +AL ++ L+ SK + ++ I+ + G
Sbjct: 417 QEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKG 476
Query: 149 KLLKDAY 155
++DA+
Sbjct: 477 GKVEDAW 483
Score = 42.7 bits (99), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 34/67 (50%)
Query: 29 DVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYMLAYRTM 88
DVV NS++ CR+GD + ++RK++E + D T+ +I C++ A
Sbjct: 182 DVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLF 241
Query: 89 VDMHRKG 95
+M KG
Sbjct: 242 KEMETKG 248
Score = 35.4 bits (80), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 21/107 (19%), Positives = 49/107 (45%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ C++G + + L D ++ +V+ N +L + + G ++ + +++
Sbjct: 259 LVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRG 318
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLI 107
ISP+ T++ L+ +C + A + M R P+ +SLI
Sbjct: 319 ISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLI 365
>gi|357140400|ref|XP_003571756.1| PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
mitochondrial-like [Brachypodium distachyon]
Length = 673
Score = 48.5 bits (114), Expect = 8e-04, Method: Composition-based stats.
Identities = 42/164 (25%), Positives = 78/164 (47%), Gaps = 12/164 (7%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I A R+G +++ LA D D+V N ++ A CR G+++ + ++ ++ E
Sbjct: 489 LIHALLRNGSWQDAISLANDMVLHGCSLDIVSYNGLIKALCRDGNVDRSIMLLSEMAEKG 548
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
I P+ ++++LI CK + A +M + P+ ++LI L KM AL
Sbjct: 549 IKPNNVSYNLLISELCKTRRVRDALELSKEMLNQELTPDIVTYNTLINGLCKMGWMHAAL 608
Query: 121 SVYNMLRYSKRSMCKALHEKIL--HILIS----GKLLKDAYIVV 158
++ L +H I+ +ILIS +LL DA +++
Sbjct: 609 NLLEKLHNED------VHADIITYNILISWHCKARLLHDASMLL 646
Score = 46.2 bits (108), Expect = 0.005, Method: Composition-based stats.
Identities = 31/154 (20%), Positives = 70/154 (45%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C+ G +L + E K +V +L ++CR G +++ ++ + +
Sbjct: 349 LIHGLCKLGRLGSAMKLLREMEDKGFAPSIVTYTILLHSFCRNGMWDNIRAMLEVMSDKG 408
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+S + ++ +I CK++ A R M +M +G++P+ +++I+HL EA
Sbjct: 409 LSMNLEGYNGMICAVCKDRRMDDAMRFMQEMKSQGYKPDICTYNTIIYHLCNNNQMEEAE 468
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLKDA 154
++ L + + ++H L+ +DA
Sbjct: 469 YLFENLLHEGVVANAITYNTLIHALLRNGSWQDA 502
Score = 35.0 bits (79), Expect = 9.7, Method: Composition-based stats.
Identities = 22/98 (22%), Positives = 42/98 (42%), Gaps = 4/98 (4%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ C + EE + + G + + +VVL N+++ G ++ + +
Sbjct: 283 LLKGLCLASQVEEARTMLG----RVPELNVVLFNTVIGRCLLDGKLKEAAELYETMGSKG 338
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQP 98
PD +T+ ILI CK A + + +M KG P
Sbjct: 339 CPPDAHTYSILIHGLCKLGRLGSAMKLLREMEDKGFAP 376
>gi|147789724|emb|CAN67401.1| hypothetical protein VITISV_025967 [Vitis vinifera]
Length = 592
Score = 48.5 bits (114), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 31/127 (24%), Positives = 65/127 (51%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ AF G ++E ++L + ++ + + V + ++ + CR G ++ + V++ + E
Sbjct: 293 LLRAFLNQGKWDEGEKLVAEMFSRGCEPNKVTYSILISSLCRFGRIDEAISVLKVMIEKE 352
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
++PD ++ LI CKE LA M M G P+ ++++ L K ++AL
Sbjct: 353 LTPDTYSYDPLISALCKEGRLDLAIGIMDYMISNGCLPDIVNYNTILAALCKNGNANQAL 412
Query: 121 SVYNMLR 127
++N LR
Sbjct: 413 EIFNKLR 419
Score = 41.2 bits (95), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 25/123 (20%), Positives = 56/123 (45%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+++A C++G + ++ +V N+M+ A GD + ++ +
Sbjct: 398 ILAALCKNGNANQALEIFNKLRGMGCPPNVSSYNTMISALWSCGDRSRALGMVPAMISKG 457
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
I PD T++ LI C++ + A + DM + G +P + ++ L K+R +A+
Sbjct: 458 IDPDEITYNSLISCLCRDGLVEEAIGLLDDMEQSGFRPTVISYNIVLLGLCKVRRIDDAI 517
Query: 121 SVY 123
++
Sbjct: 518 GMF 520
Score = 40.4 bits (93), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 30/126 (23%), Positives = 54/126 (42%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
MISA G + +K D + NS++ CR G +E + ++ +++
Sbjct: 433 MISALWSCGDRSRALGMVPAMISKGIDPDEITYNSLISCLCRDGLVEEAIGLLDDMEQSG 492
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
P +++I++ CK + A +M KG +P E LI +G +EA+
Sbjct: 493 FRPTVISYNIVLLGLCKVRRIDDAIGMFAEMIEKGCRPNETTYILLIEGIGFAGWRTEAM 552
Query: 121 SVYNML 126
+ N L
Sbjct: 553 ELANSL 558
Score = 39.7 bits (91), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 30/131 (22%), Positives = 60/131 (45%), Gaps = 4/131 (3%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+ISA C+ G + + + D+V N++L A C+ G+ + + KL +
Sbjct: 363 LISALCKEGRLDLAIGIMDYMISNGCLPDIVNYNTILAALCKNGNANQALEIFNKLRGMG 422
Query: 61 ISPDYNTFHILIK--YFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSE 118
P+ ++++ +I + C ++ L + M KG P+E +SLI L + E
Sbjct: 423 CPPNVSSYNTMISALWSCGDRSRALGM--VPAMISKGIDPDEITYNSLISCLCRDGLVEE 480
Query: 119 ALSVYNMLRYS 129
A+ + + + S
Sbjct: 481 AIGLLDDMEQS 491
>gi|60390261|sp|Q76C99.1|RF1_ORYSI RecName: Full=Protein Rf1, mitochondrial; AltName: Full=Fertility
restorer; AltName: Full=Protein PPR; AltName:
Full=Restorer for CMS; Flags: Precursor
gi|33859440|dbj|BAC77665.2| PPR protein [Oryza sativa Indica Group]
gi|33859442|dbj|BAC77666.2| Rf1 [Oryza sativa Indica Group]
gi|41152689|dbj|BAD08214.1| fertility restorer [Oryza sativa Indica Group]
gi|46091159|dbj|BAD13708.1| PPR protein [Oryza sativa Indica Group]
gi|47550657|dbj|BAD20283.1| restorer for CMS [Oryza sativa Indica Group]
Length = 791
Score = 48.5 bits (114), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 24/99 (24%), Positives = 48/99 (48%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+A C++ ++ ++ D + NS+L YC +G + + ++K+
Sbjct: 237 IIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGFLKKMRSDG 296
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPE 99
+ PD T+ +L+ Y CK M A + M ++G +PE
Sbjct: 297 VEPDVVTYSLLMDYLCKNGRCMEARKIFDSMTKRGLKPE 335
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 38/157 (24%), Positives = 70/157 (44%), Gaps = 6/157 (3%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYD---KYDVVLLNSMLCAYCRTGDMESVMHVMRKLD 57
+I + C+ G E+++L FE K +V+ N+++ YC G M+ M ++ +
Sbjct: 482 IIDSHCKEGRVIESEKL---FELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMV 538
Query: 58 ELAISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHS 117
+ + P+ T+ LI +CK A +M G P+ + ++ L + R +
Sbjct: 539 SVGLKPNTVTYSTLINGYCKISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTA 598
Query: 118 EALSVYNMLRYSKRSMCKALHEKILHILISGKLLKDA 154
A +Y + S + + + ILH L KL DA
Sbjct: 599 AAKELYVRITESGTQIELSTYNIILHGLCKNKLTDDA 635
Score = 44.3 bits (103), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 26/126 (20%), Positives = 61/126 (48%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ +C +G +E +L + K + V ++++ YC+ ME + + ++++
Sbjct: 517 LINGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYCKISRMEDALVLFKEMESSG 576
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+SPD T++I+++ + + A V + G Q E + ++ L K + +AL
Sbjct: 577 VSPDIITYNIILQGLFQTRRTAAAKELYVRITESGTQIELSTYNIILHGLCKNKLTDDAL 636
Query: 121 SVYNML 126
++ L
Sbjct: 637 QMFQNL 642
Score = 38.5 bits (88), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 33/136 (24%), Positives = 60/136 (44%), Gaps = 17/136 (12%)
Query: 8 SGCFEETKQLAGDFEAKYDKY----------DVVLLNSMLCAYCRTGDMESVMHVMRKLD 57
+G F+E GD + Y Y DVV NS++ A C+ M+ M V+ +
Sbjct: 204 NGFFKE-----GDSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMV 258
Query: 58 ELAISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHS 117
+ + PD T++ ++ +C A + M G +P+ S L+ +L K
Sbjct: 259 KNGVMPDCMTYNSILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCM 318
Query: 118 EALSVYNMLRYSKRSM 133
EA +++ + +KR +
Sbjct: 319 EARKIFDSM--TKRGL 332
Score = 37.7 bits (86), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 39/78 (50%), Gaps = 6/78 (7%)
Query: 36 MLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMY---MLAYRTMVDMH 92
++CAY + G ++ M V K+ + ++P+ T+ +I CK ML + M+D
Sbjct: 377 LICAYAKQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMID-- 434
Query: 93 RKGHQPEEELCSSLIFHL 110
+G P + +SLI L
Sbjct: 435 -EGLSPGNIVYNSLIHGL 451
Score = 37.4 bits (85), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 33/129 (25%), Positives = 54/129 (41%), Gaps = 8/129 (6%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSML---CAYCRTGDMESVMHVMRKLD 57
+I CR+G + G+ K + D + +L CA RT D + V+R++
Sbjct: 93 LIGCCCRAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDI--VLRRMT 150
Query: 58 ELAISPDYNTFHILIKYFCKEKMYMLAYR---TMVDMHRKGHQPEEELCSSLIFHLGKMR 114
EL P+ +++IL+K C E A M D G P+ +++I K
Sbjct: 151 ELGCIPNVFSYNILLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTTVINGFFKEG 210
Query: 115 AHSEALSVY 123
+A S Y
Sbjct: 211 DSDKAYSTY 219
>gi|83744088|gb|ABC42330.1| PPR protein [Oryza sativa Indica Group]
Length = 791
Score = 48.5 bits (114), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 24/99 (24%), Positives = 48/99 (48%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+A C++ ++ ++ D + NS+L YC +G + + ++K+
Sbjct: 237 IIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGFLKKMRSDG 296
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPE 99
+ PD T+ +L+ Y CK M A + M ++G +PE
Sbjct: 297 VEPDVVTYSLLMDYLCKNGRCMEARKIFDSMTKRGLKPE 335
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 38/157 (24%), Positives = 70/157 (44%), Gaps = 6/157 (3%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYD---KYDVVLLNSMLCAYCRTGDMESVMHVMRKLD 57
+I + C+ G E+++L FE K +V+ N+++ YC G M+ M ++ +
Sbjct: 482 IIDSHCKEGRVIESEKL---FELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMV 538
Query: 58 ELAISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHS 117
+ + P+ T+ LI +CK A +M G P+ + ++ L + R +
Sbjct: 539 SVGLKPNTVTYSTLINGYCKISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTA 598
Query: 118 EALSVYNMLRYSKRSMCKALHEKILHILISGKLLKDA 154
A +Y + S + + + ILH L KL DA
Sbjct: 599 AAKELYVRITESGTQIELSTYNIILHGLCKNKLTDDA 635
Score = 44.3 bits (103), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 26/126 (20%), Positives = 61/126 (48%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ +C +G +E +L + K + V ++++ YC+ ME + + ++++
Sbjct: 517 LINGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYCKISRMEDALVLFKEMESSG 576
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+SPD T++I+++ + + A V + G Q E + ++ L K + +AL
Sbjct: 577 VSPDIITYNIILQGLFQTRRTAAAKELYVRITESGTQIELSTYNIILHGLCKNKLTDDAL 636
Query: 121 SVYNML 126
++ L
Sbjct: 637 QMFQNL 642
Score = 38.5 bits (88), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 33/136 (24%), Positives = 60/136 (44%), Gaps = 17/136 (12%)
Query: 8 SGCFEETKQLAGDFEAKYDKY----------DVVLLNSMLCAYCRTGDMESVMHVMRKLD 57
+G F+E GD + Y Y DVV NS++ A C+ M+ M V+ +
Sbjct: 204 NGFFKE-----GDSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMV 258
Query: 58 ELAISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHS 117
+ + PD T++ ++ +C A + M G +P+ S L+ +L K
Sbjct: 259 KNGVMPDCMTYNSILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCM 318
Query: 118 EALSVYNMLRYSKRSM 133
EA +++ + +KR +
Sbjct: 319 EARKIFDSM--TKRGL 332
Score = 37.4 bits (85), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 33/129 (25%), Positives = 54/129 (41%), Gaps = 8/129 (6%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSML---CAYCRTGDMESVMHVMRKLD 57
+I CR+G + G+ K + D + +L CA RT D + V+R++
Sbjct: 93 LIGCCCRAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDI--VLRRMT 150
Query: 58 ELAISPDYNTFHILIKYFCKEKMYMLAYR---TMVDMHRKGHQPEEELCSSLIFHLGKMR 114
EL P+ +++IL+K C E A M D G P+ +++I K
Sbjct: 151 ELGCIPNVFSYNILLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTTVINGFFKEG 210
Query: 115 AHSEALSVY 123
+A S Y
Sbjct: 211 DSDKAYSTY 219
Score = 37.0 bits (84), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 38/78 (48%), Gaps = 6/78 (7%)
Query: 36 MLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMY---MLAYRTMVDMH 92
++CAY G ++ M V K+ + ++P+ T+ +I CK ML + M+D
Sbjct: 377 LICAYANQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMID-- 434
Query: 93 RKGHQPEEELCSSLIFHL 110
+G P + +SLI L
Sbjct: 435 -EGLSPGNIVYNSLIHGL 451
>gi|224080297|ref|XP_002306087.1| predicted protein [Populus trichocarpa]
gi|222849051|gb|EEE86598.1| predicted protein [Populus trichocarpa]
Length = 677
Score = 48.5 bits (114), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 55/114 (48%), Gaps = 4/114 (3%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I + + GCF+E Q+ E + +D+V N+M+ AYCR GDME + + + EL
Sbjct: 164 LIDMYSKCGCFKEACQVFKGCE-REGGFDLVSKNAMVAAYCREGDMEMALRLFWRESELN 222
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMR 114
S +NT LI + + + A + V M G + E S++ +R
Sbjct: 223 DSVSWNT---LISGYVQNGYPVEALKLFVCMGENGVKWNEHTFGSVLSACADLR 273
>gi|297796623|ref|XP_002866196.1| hypothetical protein ARALYDRAFT_495822 [Arabidopsis lyrata subsp.
lyrata]
gi|297312031|gb|EFH42455.1| hypothetical protein ARALYDRAFT_495822 [Arabidopsis lyrata subsp.
lyrata]
Length = 821
Score = 48.5 bits (114), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 28/122 (22%), Positives = 57/122 (46%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ C+ G + L ++K + + NS++ C+ G + + + LD +
Sbjct: 512 IINGLCKEGFLVKALDLCNFAKSKGVTLNTITYNSLINGLCQQGCLVEALRLFDSLDNIG 571
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ P T+ ILI CKE +++ A + + M KG P + +S++ K+ +A+
Sbjct: 572 LVPSEVTYGILIDNLCKEGLFLDAEKLLDSMVSKGLVPNILIYNSIVDGYCKLGQTEDAM 631
Query: 121 SV 122
V
Sbjct: 632 RV 633
Score = 43.1 bits (100), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 38/76 (50%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ +C+ G E+ ++ K D ++S++ YC+ GDME + V + E
Sbjct: 617 IVDGYCKLGQTEDAMRVLSRKMMGRVKPDAFTVSSIIKGYCKKGDMEEALRVFAEFKEEN 676
Query: 61 ISPDYNTFHILIKYFC 76
IS D+ F LIK FC
Sbjct: 677 ISADFLGFLFLIKCFC 692
Score = 41.6 bits (96), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 21/78 (26%), Positives = 40/78 (51%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C+ G F + ++L +K ++++ NS++ YC+ G E M V+ +
Sbjct: 582 LIDNLCKEGLFLDAEKLLDSMVSKGLVPNILIYNSIVDGYCKLGQTEDAMRVLSRKMMGR 641
Query: 61 ISPDYNTFHILIKYFCKE 78
+ PD T +IK +CK+
Sbjct: 642 VKPDAFTVSSIIKGYCKK 659
Score = 38.9 bits (89), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 27/119 (22%), Positives = 51/119 (42%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I R G E+ L G + + +++ +++ C+ G +E + ++
Sbjct: 134 LIDGLSREGNIEKALGLLGKMIKEGIEPNLITYTAIIRGLCKKGKLEDAFVLFDRILSFG 193
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEA 119
I D + LI CK+ A+ + DM ++G QP +++I L K SEA
Sbjct: 194 IEVDEFLYVTLIDGICKKGNLNRAFSMLGDMEQRGIQPSILTYNTVINGLCKAGRVSEA 252
Score = 38.5 bits (88), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 28/124 (22%), Positives = 58/124 (46%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++SA C+ G +E + L E + ++D V ++ + Y + G + + RK+ E
Sbjct: 64 VVSALCQLGKVDEVRDLVRRLEDEGFEFDCVFYSNWIHGYFKGGALVDALMQDRKMVEKG 123
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
I+ D ++ ILI +E A + M ++G +P +++I L K +A
Sbjct: 124 INRDVVSYSILIDGLSREGNIEKALGLLGKMIKEGIEPNLITYTAIIRGLCKKGKLEDAF 183
Query: 121 SVYN 124
+++
Sbjct: 184 VLFD 187
>gi|326527525|dbj|BAK08037.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 460
Score = 48.5 bits (114), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 35/154 (22%), Positives = 67/154 (43%)
Query: 2 ISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAI 61
++A CR G + + D DVV N++L A+CR +++ V+ ++ E +
Sbjct: 17 LAALCRGGGIARAESVLVDAIRLGMPPDVVTYNTLLAAHCRASGLDAGFAVLHRMREAGV 76
Query: 62 SPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEALS 121
SPD T++ LI + + M A +M + G P+ ++L+ L + +A
Sbjct: 77 SPDAITYNSLIAGAARRGLTMRALDLFDEMLQAGVAPDAWSYNALMHCLFRSGHPEDAYR 136
Query: 122 VYNMLRYSKRSMCKALHEKILHILISGKLLKDAY 155
V+ + + C + +L L +AY
Sbjct: 137 VFADMAEKGVAPCATTYNTLLDGLFRFGHATNAY 170
Score = 38.9 bits (89), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 28/126 (22%), Positives = 51/126 (40%)
Query: 32 LLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYMLAYRTMVDM 91
L+N L A CR G + V+ L + PD T++ L+ C+ + + M
Sbjct: 12 LMNVCLAALCRGGGIARAESVLVDAIRLGMPPDVVTYNTLLAAHCRASGLDAGFAVLHRM 71
Query: 92 HRKGHQPEEELCSSLIFHLGKMRAHSEALSVYNMLRYSKRSMCKALHEKILHILISGKLL 151
G P+ +SLI + AL +++ + + + + ++H L
Sbjct: 72 REAGVSPDAITYNSLIAGAARRGLTMRALDLFDEMLQAGVAPDAWSYNALMHCLFRSGHP 131
Query: 152 KDAYIV 157
+DAY V
Sbjct: 132 EDAYRV 137
>gi|15224262|ref|NP_179484.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75099137|sp|O64624.1|PP163_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g18940
gi|3004555|gb|AAC09028.1| putative salt-inducible protein [Arabidopsis thaliana]
gi|15983785|gb|AAL10489.1| At2g18940/F19F24.14 [Arabidopsis thaliana]
gi|38564280|gb|AAR23719.1| At2g18940/F19F24.14 [Arabidopsis thaliana]
gi|330251736|gb|AEC06830.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 822
Score = 48.5 bits (114), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 23/98 (23%), Positives = 50/98 (51%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
M+S F R+ +++ + + D+V NS++ Y R G+ +++ L++
Sbjct: 637 MLSIFTRNNMYDQAEGILESIREDGLSPDLVTYNSLMDMYVRRGECWKAEEILKTLEKSQ 696
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQP 98
+ PD +++ +IK FC+ + A R + +M +G +P
Sbjct: 697 LKPDLVSYNTVIKGFCRRGLMQEAVRMLSEMTERGIRP 734
Score = 38.9 bits (89), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 26/123 (21%), Positives = 56/123 (45%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++SA R G E K+ + ++ + V N++L + + G + V+++++E +
Sbjct: 287 VLSACAREGLLREAKEFFAELKSCGYEPGTVTYNALLQVFGKAGVYTEALSVLKEMEENS 346
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
D T++ L+ + + A + M +KG P +++I GK EAL
Sbjct: 347 CPADSVTYNELVAAYVRAGFSKEAAGVIEMMTKKGVMPNAITYTTVIDAYGKAGKEDEAL 406
Query: 121 SVY 123
++
Sbjct: 407 KLF 409
>gi|115455091|ref|NP_001051146.1| Os03g0728200 [Oryza sativa Japonica Group]
gi|50428716|gb|AAT77067.1| putative PPR repeat containing protein [Oryza sativa Japonica
Group]
gi|108710874|gb|ABF98669.1| pentatricopeptide, putative [Oryza sativa Japonica Group]
gi|113549617|dbj|BAF13060.1| Os03g0728200 [Oryza sativa Japonica Group]
Length = 601
Score = 48.5 bits (114), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 25/107 (23%), Positives = 48/107 (44%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ +CR G +E K + +A DVV+ N++L + G E + R+++
Sbjct: 201 LLYGWCRMGKLDEAKHVLARMKAAEVAPDVVVFNTLLAGFVADGRFEDAFELAREMERRG 260
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLI 107
P+ ++ L++ A R V+M RKG P+ +L+
Sbjct: 261 CPPNAVSYTTLMQGLGARGRVDEAMRVFVEMRRKGCAPDSVTYGTLV 307
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/94 (24%), Positives = 46/94 (48%)
Query: 34 NSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHR 93
++L +CR G ++ HV+ ++ ++PD F+ L+ F + + A+ +M R
Sbjct: 199 TALLYGWCRMGKLDEAKHVLARMKAAEVAPDVVVFNTLLAGFVADGRFEDAFELAREMER 258
Query: 94 KGHQPEEELCSSLIFHLGKMRAHSEALSVYNMLR 127
+G P ++L+ LG EA+ V+ +R
Sbjct: 259 RGCPPNAVSYTTLMQGLGARGRVDEAMRVFVEMR 292
Score = 40.0 bits (92), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 32/142 (22%), Positives = 62/142 (43%), Gaps = 17/142 (11%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+++ F G FE+ +LA + E + + V +++ G ++ M V ++
Sbjct: 236 LLAGFVADGRFEDAFELAREMERRGCPPNAVSYTTLMQGLGARGRVDEAMRVFVEMRRKG 295
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKG--------------HQPEEEL--CS 104
+PD T+ L+ FCK Y + M R+G H+ +E+L C
Sbjct: 296 CAPDSVTYGTLVTAFCKAGRISQGYEFLDVMAREGLRVDAGVYLGFFVAHEKKEQLEECL 355
Query: 105 SLIFHLGKMRAHSEALSVYNML 126
L+ + + R + LS+YN++
Sbjct: 356 ELMERMRECRCPPD-LSIYNVV 376
>gi|6723418|emb|CAB66911.1| putative protein [Arabidopsis thaliana]
Length = 1184
Score = 48.5 bits (114), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 33/131 (25%), Positives = 59/131 (45%), Gaps = 3/131 (2%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ A C++G +E ++ D K+ ++ S+L +CR G + V+ ++ E
Sbjct: 208 LLDALCKNGSVKEASKVFEDMREKFPP-NLRYFTSLLYGWCREGKLMEAKEVLVQMKEAG 266
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAH-SEA 119
+ PD F L+ + AY M DM ++G +P + LI L + EA
Sbjct: 267 LEPDIVVFTNLLSGYAHAGKMADAYDLMNDMRKRGFEPNVNCYTVLIQALCRTEKRMDEA 326
Query: 120 LSVY-NMLRYS 129
+ V+ M RY
Sbjct: 327 MRVFVEMERYG 337
Score = 39.3 bits (90), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 26/101 (25%), Positives = 44/101 (43%), Gaps = 1/101 (0%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGD-MESVMHVMRKLDEL 59
++S + +G + L D + + +V ++ A CRT M+ M V +++
Sbjct: 277 LLSGYAHAGKMADAYDLMNDMRKRGFEPNVNCYTVLIQALCRTEKRMDEAMRVFVEMERY 336
Query: 60 AISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEE 100
D T+ LI FCK M Y + DM +KG P +
Sbjct: 337 GCEADIVTYTALISGFCKWGMIDKGYSVLDDMRKKGVMPSQ 377
>gi|226528493|ref|NP_001147073.1| ATP binding protein [Zea mays]
gi|195607078|gb|ACG25369.1| ATP binding protein [Zea mays]
Length = 655
Score = 48.5 bits (114), Expect = 8e-04, Method: Composition-based stats.
Identities = 29/110 (26%), Positives = 50/110 (45%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ A CR G F ++ D A+ DV N +L A C G ++ +H++R L
Sbjct: 163 ILEAACRGGGFRSAVRVLEDLHARGCALDVGNCNLVLNAICDQGSVDKALHLLRDLPSFG 222
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHL 110
PD +++ ++K C K + M +M R P ++LI +L
Sbjct: 223 CEPDVVSYNAVLKGLCMAKRWGCVQELMEEMVRMACPPNIVTFNTLISYL 272
Score = 46.2 bits (108), Expect = 0.004, Method: Composition-based stats.
Identities = 25/107 (23%), Positives = 50/107 (46%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+++A C G ++ L D + + DVV N++L C V +M ++ +A
Sbjct: 198 VLNAICDQGSVDKALHLLRDLPSFGCEPDVVSYNAVLKGLCMAKRWGCVQELMEEMVRMA 257
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLI 107
P+ TF+ LI Y C+ ++ + + M G P+ + +++I
Sbjct: 258 CPPNIVTFNTLISYLCRNGLFERVHEVLAQMAEHGCTPDIRMYATII 304
Score = 44.7 bits (104), Expect = 0.013, Method: Composition-based stats.
Identities = 25/95 (26%), Positives = 45/95 (47%), Gaps = 3/95 (3%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
M++ +CR+G E ++LA + Y + LCA R D +V+ M +
Sbjct: 96 MVAGYCRAGQLESARRLAAAVPVPPNAYTYFPVVRALCARGRIADALAVLDEMPRRGCAP 155
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKG 95
I P Y H++++ C+ + A R + D+H +G
Sbjct: 156 IPPMY---HVILEAACRGGGFRSAVRVLEDLHARG 187
Score = 39.3 bits (90), Expect = 0.50, Method: Composition-based stats.
Identities = 19/70 (27%), Positives = 34/70 (48%)
Query: 29 DVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYMLAYRTM 88
++V N+++ CR G E V V+ ++ E +PD + +I CKE +A+ +
Sbjct: 261 NIVTFNTLISYLCRNGLFERVHEVLAQMAEHGCTPDIRMYATIIDGICKEGHLKVAHEIL 320
Query: 89 VDMHRKGHQP 98
M G +P
Sbjct: 321 NRMPSYGLKP 330
Score = 39.3 bits (90), Expect = 0.61, Method: Composition-based stats.
Identities = 24/98 (24%), Positives = 47/98 (47%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ C + +EET++L + K D V N ++ +C+ G ++ V+ ++ ++
Sbjct: 338 LLKGLCSAERWEETEELLAEMFDKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLVHG 397
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQP 98
PD T+ +I FCKE + A + M G +P
Sbjct: 398 CMPDVITYTTVINGFCKEGLIDEAVMLLKSMTACGCKP 435
Score = 38.9 bits (89), Expect = 0.78, Method: Composition-based stats.
Identities = 35/129 (27%), Positives = 58/129 (44%), Gaps = 6/129 (4%)
Query: 1 MISAFCRSGCFEETKQLAGDFEA---KYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLD 57
+I+ FC+ G +E L A K + ++ LC+ R D E +M M +
Sbjct: 408 VINGFCKEGLIDEAVMLLKSMTACGCKPNTISYTIVLKGLCSAERWVDAEDLMSQMIQ-Q 466
Query: 58 ELAISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHS 117
++P TF+ LI + CK+ + A + M G P+ S++I LGK
Sbjct: 467 GCPLNPI--TFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTD 524
Query: 118 EALSVYNML 126
EAL + N++
Sbjct: 525 EALELLNVM 533
Score = 35.8 bits (81), Expect = 5.8, Method: Composition-based stats.
Identities = 16/94 (17%), Positives = 41/94 (43%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+IS CR+G FE ++ D+ + +++ C+ G ++ ++ ++
Sbjct: 268 LISYLCRNGLFERVHEVLAQMAEHGCTPDIRMYATIIDGICKEGHLKVAHEILNRMPSYG 327
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRK 94
+ P+ ++ L+K C + + + +M K
Sbjct: 328 LKPNVVCYNTLLKGLCSAERWEETEELLAEMFDK 361
>gi|108706850|gb|ABF94645.1| expressed protein [Oryza sativa Japonica Group]
Length = 476
Score = 48.5 bits (114), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 47/98 (47%), Gaps = 3/98 (3%)
Query: 2 ISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAI 61
I + CR+G K L E K KYDVV N+++ +C GD++ V + +
Sbjct: 311 IRSLCRAGKLRLAKCL---IENKGIKYDVVAFNTLIHGFCIAGDLDRVQQTRTDMINRDV 367
Query: 62 SPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPE 99
P+ T +LI CKE+ + A R ++D G P+
Sbjct: 368 IPNNFTDAMLIDSLCKERKFGEAKRFVLDSLVNGLVPD 405
>gi|388516039|gb|AFK46081.1| unknown [Lotus japonicus]
Length = 327
Score = 48.5 bits (114), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 30/116 (25%), Positives = 59/116 (50%)
Query: 11 FEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHI 70
+E+ ++L D +K + +VV + ++ + CR G +E + +++ + E ++PD ++
Sbjct: 111 WEDGEKLMSDMLSKGCEPNVVTYSILISSLCRDGKVEEAVSLLKVMKEQGLTPDAYSYDP 170
Query: 71 LIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVYNML 126
LI FCKE LA + M G P+ ++++ L K EAL ++ L
Sbjct: 171 LIAAFCKESRVDLAIEFLESMISDGCLPDIVNYNTILSTLCKNGKADEALKIFEKL 226
Score = 40.4 bits (93), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 27/127 (21%), Positives = 58/127 (45%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I A G ++ +L + + D+ + N+++ CR G ++ +R +
Sbjct: 31 LIEATILKGGVDDVMKLLDEMIESGLRPDMFIFNAVVGGMCREGLVDRAFEFIRYISAKG 90
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+PD ++ IL++ ++ + + M DM KG +P S LI L + EA+
Sbjct: 91 YAPDVISYSILLRGLLNQRKWEDGEKLMSDMLSKGCEPNVVTYSILISSLCRDGKVEEAV 150
Query: 121 SVYNMLR 127
S+ +++
Sbjct: 151 SLLKVMK 157
Score = 38.9 bits (89), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 28/111 (25%), Positives = 52/111 (46%), Gaps = 8/111 (7%)
Query: 1 MISAFCRSGCFEETKQLAGDF-EAKYDK---YDVVLLNSMLCAYCRTGDMESVMHVMRKL 56
+I+AFC+ E LA +F E+ D+V N++L C+ G + + + KL
Sbjct: 171 LIAAFCK----ESRVDLAIEFLESMISDGCLPDIVNYNTILSTLCKNGKADEALKIFEKL 226
Query: 57 DELAISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLI 107
E+ P+ ++++ L + A +++M K P+E +SLI
Sbjct: 227 GEVGCPPNVSSYNTLFSALWSSGHKIRALGMILEMLSKDIDPDEITYNSLI 277
>gi|222612845|gb|EEE50977.1| hypothetical protein OsJ_31558 [Oryza sativa Japonica Group]
Length = 1263
Score = 48.5 bits (114), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 42/86 (48%)
Query: 41 CRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEE 100
C+ G + + R+L E+ + PD T+++LI K K A +M +KG P
Sbjct: 1066 CKAGQLNDGLTYFRQLLEMGLEPDLITYNLLIDGLGKSKRLEEAVSLFNEMQKKGIVPNL 1125
Query: 101 ELCSSLIFHLGKMRAHSEALSVYNML 126
+SLI HLGK +EA +Y L
Sbjct: 1126 YTYNSLILHLGKAGKAAEAGKMYEEL 1151
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 37/155 (23%), Positives = 76/155 (49%), Gaps = 11/155 (7%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ ++G E+ + L + K + + N +L + G+ E V H+ + + +
Sbjct: 991 LLDGLLKAGRIEDAENLFNEMLEYGCKANCTIYNILLNGHRIAGNTEKVCHLFQDMVDQG 1050
Query: 61 ISPDYNTFHILIKYFCKEKMY---MLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHS 117
I+PD ++ I+I CK + +R +++M G +P+ + LI LGK +
Sbjct: 1051 INPDIKSYTIIIDTLCKAGQLNDGLTYFRQLLEM---GLEPDLITYNLLIDGLGKSKRLE 1107
Query: 118 EALSVYNMLRYSKRSMCKAL---HEKILHILISGK 149
EA+S++N ++ K+ + L + ILH+ +GK
Sbjct: 1108 EAVSLFNEMQ--KKGIVPNLYTYNSLILHLGKAGK 1140
Score = 39.7 bits (91), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 22/90 (24%), Positives = 45/90 (50%)
Query: 34 NSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHR 93
N++L R G ++ VMH++ ++ P+ T++ ++ CK A + M
Sbjct: 674 NTLLAGLGREGKVKEVMHLLEEMYHSNYPPNLITYNTILDCLCKNGAVNDALDMLYSMTT 733
Query: 94 KGHQPEEELCSSLIFHLGKMRAHSEALSVY 123
KG P+ +++I+ L K ++EA S++
Sbjct: 734 KGCIPDLSSYNTVIYGLVKEERYNEAFSIF 763
Score = 38.9 bits (89), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 27/99 (27%), Positives = 45/99 (45%)
Query: 29 DVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYMLAYRTM 88
DVV N++L ++G + V +L + +SPD T+ ++IK K + A +
Sbjct: 564 DVVAGNAVLFGLAKSGRLGMAKRVFHELKAMGVSPDTITYTMMIKCCSKASKFDEAVKIF 623
Query: 89 VDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVYNMLR 127
DM P+ +SLI L K EA ++ L+
Sbjct: 624 YDMIENNCVPDVLAVNSLIDTLYKAGRGDEAWRIFYQLK 662
Score = 38.9 bits (89), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 15/64 (23%), Positives = 38/64 (59%)
Query: 36 MLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKG 95
++ A+ + D+E+V+ ++R+++ + P+ ++ I I+ + K + AYR + M +G
Sbjct: 326 LMVAFGKRRDVETVLWLLREMEAHGVKPNVYSYTICIRVLGQAKRFDEAYRILAKMENEG 385
Query: 96 HQPE 99
+P+
Sbjct: 386 CKPD 389
Score = 38.1 bits (87), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 33/154 (21%), Positives = 64/154 (41%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C+ E +L F++ L NS++C ++ + ++ EL
Sbjct: 851 LIKHLCKQKKALEAHELVKKFKSFGVSLKTGLYNSLICGLVDENLIDIAEGLFAEMKELG 910
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
PD T+++L+ K + +MHRKG++ +++I L K R +A+
Sbjct: 911 CGPDEFTYNLLLDAMGKSMRIEEMLKVQEEMHRKGYESTYVTYNTIISGLVKSRRLEQAI 970
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLKDA 154
+Y L S + +L L+ ++DA
Sbjct: 971 DLYYNLMSQGFSPTPCTYGPLLDGLLKAGRIEDA 1004
Score = 36.6 bits (83), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 27/123 (21%), Positives = 50/123 (40%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C +G + K + + K D V ++L + GD +SVM + +
Sbjct: 396 LIQVLCDAGRISDAKDVFWKMKKSDQKPDRVTYITLLDKFGDNGDSQSVMEIWNAMKADG 455
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ + + +I C+ A +M +KG PE+ +SLI K +AL
Sbjct: 456 YNDNVVAYTAVIDALCQVGRVFEALEMFDEMKQKGIVPEQYSYNSLISGFLKADRFGDAL 515
Query: 121 SVY 123
++
Sbjct: 516 ELF 518
>gi|297823431|ref|XP_002879598.1| hypothetical protein ARALYDRAFT_902735 [Arabidopsis lyrata subsp.
lyrata]
gi|297325437|gb|EFH55857.1| hypothetical protein ARALYDRAFT_902735 [Arabidopsis lyrata subsp.
lyrata]
Length = 497
Score = 48.5 bits (114), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 30/113 (26%), Positives = 55/113 (48%), Gaps = 13/113 (11%)
Query: 2 ISAFCRSG-------CFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMR 54
I A+CR+G F+ K+L K +V + N+++ Y ++GDM+ + +
Sbjct: 164 IDAYCRAGKMDYALLAFDTMKRLIDG------KPNVGVYNTVVNGYVKSGDMDKALRFYQ 217
Query: 55 KLDELAISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLI 107
++ + PD TF+ LI +C+ + LA +M KG +P ++LI
Sbjct: 218 RMGKERAKPDVCTFNTLINGYCRSSKFDLALDLFREMKEKGCEPNVVSFNTLI 270
Score = 37.0 bits (84), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 16/75 (21%), Positives = 38/75 (50%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+++ + +SG ++ + + K DV N+++ YCR+ + + + R++ E
Sbjct: 199 VVNGYVKSGDMDKALRFYQRMGKERAKPDVCTFNTLINGYCRSSKFDLALDLFREMKEKG 258
Query: 61 ISPDYNTFHILIKYF 75
P+ +F+ LI+ F
Sbjct: 259 CEPNVVSFNTLIRGF 273
>gi|293334951|ref|NP_001170632.1| uncharacterized protein LOC100384682 [Zea mays]
gi|238006488|gb|ACR34279.1| unknown [Zea mays]
gi|413925463|gb|AFW65395.1| hypothetical protein ZEAMMB73_565010 [Zea mays]
Length = 462
Score = 48.5 bits (114), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 33/154 (21%), Positives = 69/154 (44%)
Query: 2 ISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAI 61
+++ CR G + + + D DVV N++L AYCR +++ + V+ ++ E +
Sbjct: 19 LASLCRGGWLDRAESVLVDAIRLGLPPDVVTYNTLLAAYCRVDGLDAGLAVVHRMREAGV 78
Query: 62 SPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEALS 121
PD T++ LI + + + A +M R G P+ ++L+ L + A
Sbjct: 79 RPDAVTYNSLITGADRSGLTVRALDLFDEMLRSGVAPDSWSYNALMHCLFRSGHPEHAYR 138
Query: 122 VYNMLRYSKRSMCKALHEKILHILISGKLLKDAY 155
V+ + + C + +L L+ + +A+
Sbjct: 139 VFADMADRGVAPCATTYNTLLDGLLKAGHVTNAF 172
>gi|218184541|gb|EEC66968.1| hypothetical protein OsI_33625 [Oryza sativa Indica Group]
Length = 1351
Score = 48.5 bits (114), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 42/86 (48%)
Query: 41 CRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEE 100
C+ G + + R+L E+ + PD T+++LI K K A +M +KG P
Sbjct: 1020 CKAGQLNDGLTYFRQLLEMGLEPDLITYNLLIDGLGKSKRLEEAVSLFNEMQKKGIVPNL 1079
Query: 101 ELCSSLIFHLGKMRAHSEALSVYNML 126
+SLI HLGK +EA +Y L
Sbjct: 1080 YTYNSLILHLGKAGKAAEAGKMYEEL 1105
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 37/155 (23%), Positives = 76/155 (49%), Gaps = 11/155 (7%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ ++G E+ + L + K + + N +L + G+ E V H+ + + +
Sbjct: 945 LLDGLLKAGRIEDAENLFNEMLEYGCKANCTIYNILLNGHRIAGNTEKVCHLFQDMVDQG 1004
Query: 61 ISPDYNTFHILIKYFCKEKMY---MLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHS 117
I+PD ++ I+I CK + +R +++M G +P+ + LI LGK +
Sbjct: 1005 INPDIKSYTIIIDTLCKAGQLNDGLTYFRQLLEM---GLEPDLITYNLLIDGLGKSKRLE 1061
Query: 118 EALSVYNMLRYSKRSMCKAL---HEKILHILISGK 149
EA+S++N ++ K+ + L + ILH+ +GK
Sbjct: 1062 EAVSLFNEMQ--KKGIVPNLYTYNSLILHLGKAGK 1094
Score = 40.4 bits (93), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 27/99 (27%), Positives = 46/99 (46%)
Query: 29 DVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYMLAYRTM 88
DVV N++L ++G + V +L + +SPD T+ ++IK K + A +
Sbjct: 518 DVVAGNAVLFGLAKSGRLGMAKRVFHELKAMGVSPDTITYTMMIKCCSKASKFDEAVKIF 577
Query: 89 VDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVYNMLR 127
DM P+ + +SLI L K EA ++ L+
Sbjct: 578 YDMIENNCVPDVLVVNSLIDTLYKAGRGDEAWQIFYQLK 616
Score = 40.0 bits (92), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 22/90 (24%), Positives = 45/90 (50%)
Query: 34 NSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHR 93
N++L R G ++ VMH++ ++ P+ T++ ++ CK A + M
Sbjct: 628 NTLLAGLGREGKVKEVMHLLEEMYHSNYPPNLITYNTILDCLCKNGAVNDALDMLYSMTT 687
Query: 94 KGHQPEEELCSSLIFHLGKMRAHSEALSVY 123
KG P+ +++I+ L K ++EA S++
Sbjct: 688 KGCIPDLSSYNTVIYGLVKEERYNEAFSIF 717
Score = 38.9 bits (89), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 14/64 (21%), Positives = 39/64 (60%)
Query: 36 MLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKG 95
++ A+ + D+E+V+ ++R+++ + P+ ++ I I+ + + + AYR + +M +G
Sbjct: 280 LMVAFGKRRDVETVLWLLREMEAHGVKPNVYSYTICIRVLGQARRFDEAYRILAEMENEG 339
Query: 96 HQPE 99
+P+
Sbjct: 340 CKPD 343
Score = 37.4 bits (85), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 27/121 (22%), Positives = 53/121 (43%)
Query: 34 NSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHR 93
NS++C ++ + ++ EL PD T+++L+ K + +MHR
Sbjct: 838 NSLICGLVDENLIDIAEGLFAEMKELGCGPDEFTYNLLLDAMGKSMRIEEMLKVQEEMHR 897
Query: 94 KGHQPEEELCSSLIFHLGKMRAHSEALSVYNMLRYSKRSMCKALHEKILHILISGKLLKD 153
KG++ +++I L K R +A+ +Y L S + +L L+ ++D
Sbjct: 898 KGYESTYVTYNTIISGLVKSRRLEQAIDLYYNLMSQGFSPTPCTYGPLLDGLLKAGRIED 957
Query: 154 A 154
A
Sbjct: 958 A 958
Score = 35.4 bits (80), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 26/123 (21%), Positives = 50/123 (40%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C +G + K + + K D V ++L + G+ +SVM + +
Sbjct: 350 LIQVLCDAGRISDAKDVFWKMKKSDQKPDRVTYITLLDKFADNGESQSVMEIWNAMKADG 409
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ + + +I C+ A +M +KG PE+ +SLI K +AL
Sbjct: 410 YNDNVVAYTAVIDALCQVGRVFEALEMFDEMKQKGIVPEQYSYNSLISGFLKADRFGDAL 469
Query: 121 SVY 123
++
Sbjct: 470 ELF 472
>gi|359491317|ref|XP_003634263.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g61400-like [Vitis vinifera]
Length = 665
Score = 48.5 bits (114), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 64/158 (40%), Gaps = 9/158 (5%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C EE L + + K + V N+++ YC+ G+ME + V ++ E
Sbjct: 374 LIKGLCGVDRMEEADGLLQEMKKKGFLPNAVTYNTLIDGYCKEGNMEKAIEVCSQMTEKG 433
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
I P+ TF LI +CK A +M KG P+ ++LI H +
Sbjct: 434 IEPNIITFSTLIDGYCKAGKMEAAMGLYTEMVIKGLLPDVVAYTALI------DGHFKDG 487
Query: 121 SVYNMLRYSKRSMCKALHEKI--LHILISGKLLKDAYI 156
+ R K LH + L LI G L KD I
Sbjct: 488 NTKEAFRLHKEMQEAGLHPNVFTLSCLIDG-LCKDGRI 524
Score = 43.9 bits (102), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 28/123 (22%), Positives = 56/123 (45%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I +C+ G E+ ++ K + +++ ++++ YC+ G ME+ M + ++
Sbjct: 409 LIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCKAGKMEAAMGLYTEMVIKG 468
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ PD + LI K+ A+R +M G P S LI L K S+A+
Sbjct: 469 LLPDVVAYTALIDGHFKDGNTKEAFRLHKEMQEAGLHPNVFTLSCLIDGLCKDGRISDAI 528
Query: 121 SVY 123
++
Sbjct: 529 KLF 531
Score = 40.0 bits (92), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 29/124 (23%), Positives = 51/124 (41%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I +C++G E L + E DV + ++ C ME +++++ +
Sbjct: 339 LIDGYCKAGNLSEALSLHSEIEKHEILPDVFTYSILIKGLCGVDRMEEADGLLQEMKKKG 398
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
P+ T++ LI +CKE A M KG +P S+LI K A+
Sbjct: 399 FLPNAVTYNTLIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCKAGKMEAAM 458
Query: 121 SVYN 124
+Y
Sbjct: 459 GLYT 462
Score = 38.9 bits (89), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 23/107 (21%), Positives = 49/107 (45%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C++ ++ D + ++ + N ++ YC+ G++ + + ++++
Sbjct: 304 LIDGLCKTDEMVSARKFLIDMASFGVVPNIFVYNCLIDGYCKAGNLSEALSLHSEIEKHE 363
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLI 107
I PD T+ ILIK C A + +M +KG P ++LI
Sbjct: 364 ILPDVFTYSILIKGLCGVDRMEEADGLLQEMKKKGFLPNAVTYNTLI 410
Score = 38.9 bits (89), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 46/91 (50%)
Query: 34 NSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHR 93
N+M+ YC+ ++ + + +++ + P+ TF ILI CK + A + ++DM
Sbjct: 267 NTMMDGYCKIAHVKKALELYQEMLGDGLLPNVVTFGILIDGLCKTDEMVSARKFLIDMAS 326
Query: 94 KGHQPEEELCSSLIFHLGKMRAHSEALSVYN 124
G P + + LI K SEALS+++
Sbjct: 327 FGVVPNIFVYNCLIDGYCKAGNLSEALSLHS 357
Score = 37.4 bits (85), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 23/99 (23%), Positives = 39/99 (39%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ + G F+ ++ GD A+ +VV +++ CR GD + ++ E
Sbjct: 164 VLDGLVKKGRFDTMWKVYGDMVARGASPNVVTYGTLIDGCCRQGDFLKAFRLFDEMIEKK 223
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPE 99
I P + ILI+ C E A M G P
Sbjct: 224 IFPTVVIYTILIRGLCGESRISEAESMFRTMRNSGMLPN 262
>gi|449475988|ref|XP_004154607.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g79540-like [Cucumis sativus]
Length = 950
Score = 48.5 bits (114), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 34/136 (25%), Positives = 61/136 (44%), Gaps = 13/136 (9%)
Query: 1 MISAFCRSGCFEETKQLAGDFE------------AKYDK-YDVVLLNSMLCAYCRTGDME 47
+I+ C++ EE + L E DK +D+ L M+ C +G +
Sbjct: 449 LINGLCKANRLEEARLLFYQMEIVRKPSLFLRLSQGTDKVFDIASLQVMMERLCESGMIL 508
Query: 48 SVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLI 107
++ +L + + PD T++ILI FCK A++ +M KGH P+ +LI
Sbjct: 509 KAYKLLMQLVDSGVLPDIRTYNILINGFCKFGNINGAFKLFKEMQLKGHMPDSVTYGTLI 568
Query: 108 FHLGKMRAHSEALSVY 123
L + + +AL ++
Sbjct: 569 DGLYRAGRNEDALEIF 584
Score = 36.2 bits (82), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 33/134 (24%), Positives = 56/134 (41%), Gaps = 1/134 (0%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
MI + G E L G+ + + D + N+++ +C G ++ + ++ +
Sbjct: 344 MIRGLSQEGRVTEALTLLGEMTERGLRPDTICYNALIKGFCDMGYLDEAESLRLEISKHD 403
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEA- 119
P+ +T+ ILI CK + A +M + G P +SLI L K EA
Sbjct: 404 CFPNNHTYSILICGMCKNGLINKAQHIFKEMEKLGCLPSVVTFNSLINGLCKANRLEEAR 463
Query: 120 LSVYNMLRYSKRSM 133
L Y M K S+
Sbjct: 464 LLFYQMEIVRKPSL 477
>gi|22330179|ref|NP_683419.1| ABA Overly-Sensitive 5 protein [Arabidopsis thaliana]
gi|75216707|sp|Q9ZU27.1|PPR76_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g51965, mitochondrial; Flags: Precursor
gi|4220445|gb|AAD12672.1| Similar to gi|3004555 F19F24.14 salt inducible protein homolog from
Arabidopsis thaliana BAC gb|AC003673 [Arabidopsis
thaliana]
gi|332194619|gb|AEE32740.1| ABA Overly-Sensitive 5 protein [Arabidopsis thaliana]
Length = 650
Score = 48.5 bits (114), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 32/127 (25%), Positives = 64/127 (50%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I++F R G +E + + E K D++ NS++ + GD++ +++ E
Sbjct: 483 LIASFGRVGEVDEAINIFEELERSDCKPDIISYNSLINCLGKNGDVDEAHVRFKEMQEKG 542
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
++PD T+ L++ F K + +AY +M KG QP + L+ L K +EA+
Sbjct: 543 LNPDVVTYSTLMECFGKTERVEMAYSLFEEMLVKGCQPNIVTYNILLDCLEKNGRTAEAV 602
Query: 121 SVYNMLR 127
+Y+ ++
Sbjct: 603 DLYSKMK 609
>gi|295830915|gb|ADG39126.1| AT5G21222-like protein [Capsella grandiflora]
Length = 166
Score = 48.5 bits (114), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 35/131 (26%), Positives = 57/131 (43%), Gaps = 2/131 (1%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+++A R F L E K D +L N+++ A +G+++ M + K+ E
Sbjct: 16 LVTALTRQKHFHSLLSLISKVEKNGLKPDTILFNAIINASSESGNLDQAMKIFEKMKESG 75
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGH-QPEEELCSSLIFHLGKMRAHSEA 119
P +TF+ LIK + K + R + M R QP + C+ L+ R EA
Sbjct: 76 CKPTTSTFNTLIKGYGKIGKLEESSRLLELMLRDEMLQPNDRTCNILVQAWCNQRKIEEA 135
Query: 120 LS-VYNMLRYS 129
+ VY M Y
Sbjct: 136 WNIVYKMQSYG 146
>gi|449527556|ref|XP_004170776.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like [Cucumis sativus]
Length = 665
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/124 (28%), Positives = 57/124 (45%), Gaps = 3/124 (2%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+IS +C++G QL D VV N++L C +G ++ M V+ + +
Sbjct: 186 LISGYCKTGEIGSALQLLDRMSVSPD---VVTYNTILRTLCDSGKLKEAMEVLDRQMQRE 242
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
PD T+ ILI+ CKE A + + +M KG +P+ + LI + K EA+
Sbjct: 243 CYPDVITYTILIEATCKESGVGQAMKLLDEMRDKGCKPDVVTYNVLINGICKEGRLDEAI 302
Query: 121 SVYN 124
N
Sbjct: 303 RFLN 306
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 23/98 (23%), Positives = 45/98 (45%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I A C+ + +L + K K DVV N ++ C+ G ++ + + +
Sbjct: 253 LIEATCKESGVGQAMKLLDEMRDKGCKPDVVTYNVLINGICKEGRLDEAIRFLNHMPSYG 312
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQP 98
P+ T +I+++ C +M A + + +M RKG P
Sbjct: 313 CQPNVITHNIILRSMCSTGRWMDAEKFLAEMIRKGCSP 350
Score = 44.3 bits (103), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 23/88 (26%), Positives = 46/88 (52%), Gaps = 8/88 (9%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C++G + ++ E DV+ N ++ YC+TG++ S + + LD ++
Sbjct: 151 LIRGLCKTGKTWKATRVMEILEDSGAVPDVITYNVLISGYCKTGEIGSALQL---LDRMS 207
Query: 61 ISPDYNTFHILIKYFC-----KEKMYML 83
+SPD T++ +++ C KE M +L
Sbjct: 208 VSPDVVTYNTILRTLCDSGKLKEAMEVL 235
Score = 42.7 bits (99), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 35/71 (49%)
Query: 7 RSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYN 66
R+G EE + D + D D++ S++ C+TG VM L++ PD
Sbjct: 122 RNGELEEGFKFLEDMVCRGDIPDIIACTSLIRGLCKTGKTWKATRVMEILEDSGAVPDVI 181
Query: 67 TFHILIKYFCK 77
T+++LI +CK
Sbjct: 182 TYNVLISGYCK 192
Score = 40.0 bits (92), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 24/98 (24%), Positives = 49/98 (50%)
Query: 29 DVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYMLAYRTM 88
D+V N++L A C+ G ++ + ++ +L SP T++ +I K A + +
Sbjct: 421 DIVTYNTLLTALCKDGKVDVAVEILNQLGSKGCSPVLITYNTVIDGLSKVGKTDDAIKLL 480
Query: 89 VDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVYNML 126
+M KG +P+ S+L+ L + EA++ ++ L
Sbjct: 481 DEMKGKGLKPDIITYSTLVGGLSREGKVDEAIAFFHDL 518
Score = 40.0 bits (92), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 27/126 (21%), Positives = 57/126 (45%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I + G ++ +L + + K K D++ ++++ R G ++ + L+E+
Sbjct: 463 VIDGLSKVGKTDDAIKLLDEMKGKGLKPDIITYSTLVGGLSREGKVDEAIAFFHDLEEMG 522
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ P+ T++ ++ CK + + A + M +G +P E LI L EAL
Sbjct: 523 VKPNAITYNSIMLGLCKARQTVRAIDFLAYMVARGCKPTETSYMILIEGLAYEGLAKEAL 582
Query: 121 SVYNML 126
+ N L
Sbjct: 583 ELLNEL 588
Score = 38.1 bits (87), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 22/99 (22%), Positives = 43/99 (43%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ C+ G +E + + + +V+ N +L + C TG + ++
Sbjct: 288 LINGICKEGRLDEAIRFLNHMPSYGCQPNVITHNIILRSMCSTGRWMDAEKFLAEMIRKG 347
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPE 99
SP TF+ILI + C++ + A + M + G P
Sbjct: 348 CSPSVVTFNILINFLCRKGLIGRAIDVLEKMPQHGCTPN 386
Score = 37.7 bits (86), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 25/100 (25%), Positives = 47/100 (47%), Gaps = 2/100 (2%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKY-DVVLLNSMLCAYCRTGDMESVMHVMRKLDEL 59
++ C SG +E ++ D + + + Y DV+ ++ A C+ + M ++ ++ +
Sbjct: 218 ILRTLCDSGKLKEAMEVL-DRQMQRECYPDVITYTILIEATCKESGVGQAMKLLDEMRDK 276
Query: 60 AISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPE 99
PD T+++LI CKE A R + M G QP
Sbjct: 277 GCKPDVVTYNVLINGICKEGRLDEAIRFLNHMPSYGCQPN 316
>gi|255574996|ref|XP_002528404.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223532192|gb|EEF33997.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 955
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/131 (26%), Positives = 61/131 (46%), Gaps = 8/131 (6%)
Query: 1 MISAFCRSGCFEETKQLAG----DFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKL 56
MI+ + R + + +++ G D A + +VLLN AY + G +E V+ ++
Sbjct: 336 MITIYTRLSLYNKAEEIIGLMGEDKVAMNVENWLVLLN----AYSQQGRLEEAEQVLVEM 391
Query: 57 DELAISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAH 116
E + SP+ F+ LI + K A R +D+ G +P+E S+I G+ +
Sbjct: 392 QEASFSPNIVAFNTLITGYGKLSNMAAAQRLFLDIQNAGLEPDETTYRSMIEGWGRTGNY 451
Query: 117 SEALSVYNMLR 127
EA Y L+
Sbjct: 452 KEAEWYYKELK 462
Score = 38.5 bits (88), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 32/123 (26%), Positives = 53/123 (43%), Gaps = 6/123 (4%)
Query: 1 MISAFCRSG---CFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLD 57
M+ + + G CF Q D Y N M+ Y G ++ V V+ +L
Sbjct: 825 MLDGYGKEGQMECFRNVLQRMKQSSYTSDHY---TYNIMINIYGEQGWIDEVAGVLTELR 881
Query: 58 ELAISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHS 117
E + PD +++ LIK + M A + +M G +P++ S+LI L K +
Sbjct: 882 ECGLRPDLCSYNTLIKAYGVAGMVEDAIDLVKEMRENGIEPDKITYSNLITALQKNDKYL 941
Query: 118 EAL 120
EA+
Sbjct: 942 EAV 944
>gi|224071479|ref|XP_002303480.1| predicted protein [Populus trichocarpa]
gi|222840912|gb|EEE78459.1| predicted protein [Populus trichocarpa]
Length = 836
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/123 (19%), Positives = 61/123 (49%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I +C+ G E ++ D +K + V LNS++ +C++ + +V+ ++
Sbjct: 367 LIDGYCKMGNISEALKIRDDMLSKGISPNSVTLNSLIQGFCKSDQIGQAENVLEEMIGRG 426
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ + +F ++I + C + ++ A + +M + +P + L ++L+ L K EA+
Sbjct: 427 LPINQGSFSMVINWLCLKFRFVTALHFIREMLLRNLRPNDGLLTTLVSGLCKAGKQGEAV 486
Query: 121 SVY 123
++
Sbjct: 487 ELW 489
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/99 (25%), Positives = 49/99 (49%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++S C++G E +L K ++V N+++ C+ G+M+ + ++R + E
Sbjct: 472 LVSGLCKAGKQGEAVELWCRLLGKGFVPNIVTSNALIHGLCKAGNMQETLKLLRDMLERG 531
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPE 99
+ D T++ LI CKE + +M +KG QP+
Sbjct: 532 LVFDRITYNTLISGCCKEGKVKEGFELKEEMVKKGIQPD 570
Score = 42.4 bits (98), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 22/99 (22%), Positives = 46/99 (46%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C++G +ET +L D + +D + N+++ C+ G ++ + ++ +
Sbjct: 507 LIHGLCKAGNMQETLKLLRDMLERGLVFDRITYNTLISGCCKEGKVKEGFELKEEMVKKG 566
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPE 99
I PD TF++L+ C A R + + G+ P
Sbjct: 567 IQPDIYTFNLLLHGLCNADKIDEASRLWHECKKNGYVPN 605
Score = 40.4 bits (93), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 31/122 (25%), Positives = 55/122 (45%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
MI+AFC+ ++ L E +VV N+++ C++G ++ K+ +
Sbjct: 262 MINAFCKGHREDDAIGLFSKMEKLGVAPNVVTYNNIIHGLCKSGRLDEAYRFKEKMVKEK 321
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+SP T+ + I K + A + +M G P E + ++LI KM SEAL
Sbjct: 322 VSPSLITYSVFINGLIKLEKIDEANCVLKEMSELGFVPNEVVYNTLIDGYCKMGNISEAL 381
Query: 121 SV 122
+
Sbjct: 382 KI 383
Score = 40.4 bits (93), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 29/122 (23%), Positives = 53/122 (43%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ C G ++ K L + + +VV +++ Y + G M V V++++
Sbjct: 682 LMHGLCNIGLVDDAKHLLDEMRKEGLLPNVVCYTTIIGGYSKLGQMNKVNIVLQEMSSHN 741
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
I P+ T+ I+I FCK A + + +M KG P+ ++ L K EA
Sbjct: 742 IHPNKFTYTIMIDGFCKLGKTKEAAKLLNEMTEKGILPDAVTYNAFTNGLCKEGKVEEAF 801
Query: 121 SV 122
V
Sbjct: 802 KV 803
Score = 37.0 bits (84), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 22/99 (22%), Positives = 45/99 (45%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
MI +C++ EE + L + +K + + V+ NS++ AYC G+M + + +
Sbjct: 612 MIDGYCKANKVEEGENLLNELVSKKLELNSVVYNSLIRAYCINGNMNAAFRLRDDMKSRG 671
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPE 99
+ T+ L+ C + A + +M ++G P
Sbjct: 672 VLLSCATYSSLMHGLCNIGLVDDAKHLLDEMRKEGLLPN 710
Score = 36.6 bits (83), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 24/91 (26%), Positives = 44/91 (48%)
Query: 29 DVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYMLAYRTM 88
DV L ++M+ A+C+ + + + K+++L ++P+ T++ +I CK AYR
Sbjct: 255 DVHLFSTMINAFCKGHREDDAIGLFSKMEKLGVAPNVVTYNNIIHGLCKSGRLDEAYRFK 314
Query: 89 VDMHRKGHQPEEELCSSLIFHLGKMRAHSEA 119
M ++ P S I L K+ EA
Sbjct: 315 EKMVKEKVSPSLITYSVFINGLIKLEKIDEA 345
>gi|225464410|ref|XP_002269194.1| PREDICTED: pentatricopeptide repeat-containing protein At5g04810,
chloroplastic [Vitis vinifera]
Length = 929
Score = 48.5 bits (114), Expect = 0.001, Method: Composition-based stats.
Identities = 30/156 (19%), Positives = 72/156 (46%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ A C+SG + + + ++ + + N ++ + R GD+ +M+++ +
Sbjct: 680 LLKACCKSGRMQSALAVTREMSSQKIPRNTFVYNILIDGWARRGDVWEAAELMQQMKQEG 739
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ PD +T+ I CK A +T+ +M G +P + ++LI + +AL
Sbjct: 740 VQPDIHTYTSFINACCKAGDMQRATKTIQEMEVVGVKPNIKTYTTLIHGWARASLPEKAL 799
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLKDAYI 156
+ ++ + KA++ ++ L+S + + YI
Sbjct: 800 KCFQEMKSAGLKPDKAVYHCLMTSLLSRASVAEEYI 835
Score = 40.8 bits (94), Expect = 0.21, Method: Composition-based stats.
Identities = 24/129 (18%), Positives = 59/129 (45%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ + + G + +++ E K+++ + ++ + R D + V + +
Sbjct: 470 LINLYIKIGKVSKALEVSKMMEVAGIKHNMKTYSMLINGFVRLKDWANAFAVFEDVVKDG 529
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ PD ++ +I+ FC A RT+ +M ++ H+P +I + AL
Sbjct: 530 LKPDVVLYNNIIRAFCGMGNMDRAIRTVKEMQKERHRPTTRTFMPIIHGFARSGDMRRAL 589
Query: 121 SVYNMLRYS 129
+++M+R+S
Sbjct: 590 EIFDMMRWS 598
Score = 37.4 bits (85), Expect = 2.3, Method: Composition-based stats.
Identities = 22/79 (27%), Positives = 39/79 (49%)
Query: 29 DVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYMLAYRTM 88
DV ++L A C++G M+S + V R++ I + ++ILI + + A M
Sbjct: 673 DVYTYEALLKACCKSGRMQSALAVTREMSSQKIPRNTFVYNILIDGWARRGDVWEAAELM 732
Query: 89 VDMHRKGHQPEEELCSSLI 107
M ++G QP+ +S I
Sbjct: 733 QQMKQEGVQPDIHTYTSFI 751
>gi|356574874|ref|XP_003555568.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04760,
chloroplastic-like [Glycine max]
Length = 576
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 57/118 (48%)
Query: 9 GCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTF 68
G +E ++L D K + ++V + ++ + CR G + V+R + E ++PD +
Sbjct: 297 GRWEAGERLMSDMIVKGCEPNIVTYSVLISSLCRDGKAGEAVDVLRVMKEKGLNPDAYCY 356
Query: 69 HILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVYNML 126
LI FCKE LA + DM G P+ ++++ L K EAL+++ L
Sbjct: 357 DPLISAFCKEGKVDLAIGFVDDMISAGWLPDIVNYNTIMGSLCKKGRADEALNIFKKL 414
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 26/122 (21%), Positives = 58/122 (47%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+ISAFC+ G + D + D+V N+++ + C+ G + +++ +KL+E+
Sbjct: 359 LISAFCKEGKVDLAIGFVDDMISAGWLPDIVNYNTIMGSLCKKGRADEALNIFKKLEEVG 418
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
P+ ++++ + + A +++M G P+ +SLI L + EA+
Sbjct: 419 CPPNASSYNTMFGALWSSGDKIRALTMILEMLSNGVDPDRITYNSLISSLCRDGMVDEAI 478
Query: 121 SV 122
+
Sbjct: 479 GL 480
>gi|295830913|gb|ADG39125.1| AT5G21222-like protein [Capsella grandiflora]
Length = 166
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/131 (26%), Positives = 57/131 (43%), Gaps = 2/131 (1%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+++A R F L E K D +L N+++ A +G+++ M + K+ E
Sbjct: 16 LVTALTRQKHFHSLLSLISKVEKNGLKPDTILFNAIINASSESGNLDQAMKIFEKMKESG 75
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGH-QPEEELCSSLIFHLGKMRAHSEA 119
P +TF+ LIK + K + R + M R QP + C+ L+ R EA
Sbjct: 76 CKPTTSTFNTLIKGYGKJGKLEESSRLLELMLRDEMLQPNDRTCNILVQAWCNQRKIEEA 135
Query: 120 LS-VYNMLRYS 129
+ VY M Y
Sbjct: 136 WNIVYKMQSYG 146
>gi|296084463|emb|CBI25022.3| unnamed protein product [Vitis vinifera]
Length = 927
Score = 48.5 bits (114), Expect = 0.001, Method: Composition-based stats.
Identities = 30/156 (19%), Positives = 72/156 (46%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ A C+SG + + + ++ + + N ++ + R GD+ +M+++ +
Sbjct: 659 LLKACCKSGRMQSALAVTREMSSQKIPRNTFVYNILIDGWARRGDVWEAAELMQQMKQEG 718
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ PD +T+ I CK A +T+ +M G +P + ++LI + +AL
Sbjct: 719 VQPDIHTYTSFINACCKAGDMQRATKTIQEMEVVGVKPNIKTYTTLIHGWARASLPEKAL 778
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLKDAYI 156
+ ++ + KA++ ++ L+S + + YI
Sbjct: 779 KCFQEMKSAGLKPDKAVYHCLMTSLLSRASVAEEYI 814
Score = 40.8 bits (94), Expect = 0.21, Method: Composition-based stats.
Identities = 24/129 (18%), Positives = 59/129 (45%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ + + G + +++ E K+++ + ++ + R D + V + +
Sbjct: 449 LINLYIKIGKVSKALEVSKMMEVAGIKHNMKTYSMLINGFVRLKDWANAFAVFEDVVKDG 508
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ PD ++ +I+ FC A RT+ +M ++ H+P +I + AL
Sbjct: 509 LKPDVVLYNNIIRAFCGMGNMDRAIRTVKEMQKERHRPTTRTFMPIIHGFARSGDMRRAL 568
Query: 121 SVYNMLRYS 129
+++M+R+S
Sbjct: 569 EIFDMMRWS 577
Score = 37.4 bits (85), Expect = 2.3, Method: Composition-based stats.
Identities = 22/79 (27%), Positives = 39/79 (49%)
Query: 29 DVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYMLAYRTM 88
DV ++L A C++G M+S + V R++ I + ++ILI + + A M
Sbjct: 652 DVYTYEALLKACCKSGRMQSALAVTREMSSQKIPRNTFVYNILIDGWARRGDVWEAAELM 711
Query: 89 VDMHRKGHQPEEELCSSLI 107
M ++G QP+ +S I
Sbjct: 712 QQMKQEGVQPDIHTYTSFI 730
>gi|224092336|ref|XP_002309564.1| predicted protein [Populus trichocarpa]
gi|222855540|gb|EEE93087.1| predicted protein [Populus trichocarpa]
Length = 593
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/100 (23%), Positives = 48/100 (48%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ FC+ G F + +L ++ Y K ++V+ N ++ A C++G++ + +L
Sbjct: 454 LLDGFCKQGYFGKAFRLFRAMQSTYSKPNLVMYNILIDAMCKSGNLRDARKLFSELFVKG 513
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEE 100
+ P+ + +I CKE + A +M G P+E
Sbjct: 514 LQPNAQIYTTIINGLCKEGLLDEALEAFRNMEEDGCPPDE 553
Score = 44.3 bits (103), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 29/126 (23%), Positives = 56/126 (44%), Gaps = 20/126 (15%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ C+ G F + +L D A+ + DV +++ C+ G+ + +++K++E
Sbjct: 174 LINWLCKVGKFAQAMELFDDMVARGCRPDVYTYTTIINGLCKIGETAAAAGLLKKMEEAG 233
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
P+ ++ Y T++D HRK + E L IF K++ S +
Sbjct: 234 CQPN-----------------VVTYSTIIDSHRKDRRVNEALD---IFSYMKVKGISPDI 273
Query: 121 SVYNML 126
YN L
Sbjct: 274 FTYNSL 279
Score = 41.6 bits (96), Expect = 0.100, Method: Compositional matrix adjust.
Identities = 26/123 (21%), Positives = 51/123 (41%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C+ G E + L + + ++ + +L +C+ G + R +
Sbjct: 419 LIHGLCQLGSLREARNLFKNMHTNGNLPNLFTYSILLDGFCKQGYFGKAFRLFRAMQSTY 478
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
P+ ++ILI CK A + ++ KG QP ++ +++I L K EAL
Sbjct: 479 SKPNLVMYNILIDAMCKSGNLRDARKLFSELFVKGLQPNAQIYTTIINGLCKEGLLDEAL 538
Query: 121 SVY 123
+
Sbjct: 539 EAF 541
Score = 41.2 bits (95), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 20/95 (21%), Positives = 47/95 (49%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I A C+SG + ++L + K + + + +++ C+ G ++ + R ++E
Sbjct: 489 LIDAMCKSGNLRDARKLFSELFVKGLQPNAQIYTTIINGLCKEGLLDEALEAFRNMEEDG 548
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKG 95
PD +++++I+ F K A + + +M KG
Sbjct: 549 CPPDEISYNVIIRGFLHHKDESRAVQLIGEMRDKG 583
Score = 39.3 bits (90), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 21/80 (26%), Positives = 37/80 (46%)
Query: 29 DVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYMLAYRTM 88
D+ NS++ C + ++ ++ L I PD TF++L+ CKE A +
Sbjct: 272 DIFTYNSLIQGLCNFSQWKEASALLNEMRSLNIMPDIVTFNVLVDTICKEGKVSEAQGVL 331
Query: 89 VDMHRKGHQPEEELCSSLIF 108
M G +P+ SSL++
Sbjct: 332 KTMTEMGVEPDVVTYSSLMY 351
Score = 38.5 bits (88), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 30/154 (19%), Positives = 65/154 (42%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C ++E L + + D+V N ++ C+ G + V++ + E+
Sbjct: 279 LIQGLCNFSQWKEASALLNEMRSLNIMPDIVTFNVLVDTICKEGKVSEAQGVLKTMTEMG 338
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ PD T+ L+ + + A + M KG +P+ + LI K++ EA
Sbjct: 339 VEPDVVTYSSLMYGYSLRSEVVEARKLFDAMITKGCKPDVFSYNILINGYCKVKRIDEAK 398
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLKDA 154
++N + + + + ++H L L++A
Sbjct: 399 QLFNEMIHQGLTPNNVSYNTLIHGLCQLGSLREA 432
Score = 38.5 bits (88), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 31/154 (20%), Positives = 67/154 (43%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ +C+ +E KQL + + + V N+++ C+ G + ++ + +
Sbjct: 384 LINGYCKVKRIDEAKQLFNEMIHQGLTPNNVSYNTLIHGLCQLGSLREARNLFKNMHTNG 443
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
P+ T+ IL+ FCK+ + A+R M +P + + LI + K +A
Sbjct: 444 NLPNLFTYSILLDGFCKQGYFGKAFRLFRAMQSTYSKPNLVMYNILIDAMCKSGNLRDAR 503
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLKDA 154
+++ L ++ I++ L LL +A
Sbjct: 504 KLFSELFVKGLQPNAQIYTTIINGLCKEGLLDEA 537
>gi|15231160|ref|NP_187922.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75311241|sp|Q9LK58.1|PP225_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g13150
gi|10172602|dbj|BAB01406.1| unnamed protein product [Arabidopsis thaliana]
gi|66792658|gb|AAY56431.1| At3g13150 [Arabidopsis thaliana]
gi|332641781|gb|AEE75302.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 551
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/128 (21%), Positives = 65/128 (50%), Gaps = 1/128 (0%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYD-KYDVVLLNSMLCAYCRTGDMESVMHVMRKLDEL 59
++SA+ S +E + + K D+V N+M+ A CR G M+ ++ + +L++
Sbjct: 163 LLSAYVNSKKLDEAMKTFKELPEKLGITPDLVTYNTMIKALCRKGSMDDILSIFEELEKN 222
Query: 60 AISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEA 119
PD +F+ L++ F + ++++ R M K P +S + L + + ++A
Sbjct: 223 GFEPDLISFNTLLEEFYRRELFVEGDRIWDLMKSKNLSPNIRSYNSRVRGLTRNKKFTDA 282
Query: 120 LSVYNMLR 127
L++ ++++
Sbjct: 283 LNLIDVMK 290
>gi|295830917|gb|ADG39127.1| AT5G21222-like protein [Capsella grandiflora]
Length = 166
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/131 (26%), Positives = 57/131 (43%), Gaps = 2/131 (1%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+++A R F L E K D +L N+++ A +G+++ M + K+ E
Sbjct: 16 LVTALTRQKHFHSLLSLISKVEKNGLKPDTILFNAIINASSESGNLDQAMKIFEKMKESG 75
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGH-QPEEELCSSLIFHLGKMRAHSEA 119
P +TF+ LIK + K + R + M R QP + C+ L+ R EA
Sbjct: 76 CKPTTSTFNTLIKGYGKIGKLEESSRLLELMLRDEMLQPNDRTCNILVQAWCNQRKIEEA 135
Query: 120 LS-VYNMLRYS 129
+ VY M Y
Sbjct: 136 WNIVYKMQSYG 146
>gi|225189439|emb|CAR70003.1| pentatricopeptide repeat(PPR)-containing protein At1g12700
[Arabidopsis thaliana]
Length = 602
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/99 (27%), Positives = 44/99 (44%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I + CR GC + L + E K K VV NS++ C+ G +++ +
Sbjct: 234 IIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSRE 293
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPE 99
I P+ TF++L+ F KE A +M +G P
Sbjct: 294 IVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPN 332
Score = 43.5 bits (101), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 29/127 (22%), Positives = 57/127 (44%)
Query: 29 DVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYMLAYRTM 88
D+V S++ YC ++ M V R + + + + T+ IL++ FC+ LA
Sbjct: 367 DIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELF 426
Query: 89 VDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVYNMLRYSKRSMCKALHEKILHILISG 148
+M G P+ L+ L +AL ++ L+ SK + ++ I+ + G
Sbjct: 427 QEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKG 486
Query: 149 KLLKDAY 155
++DA+
Sbjct: 487 GKVEDAW 493
Score = 40.4 bits (93), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 27/119 (22%), Positives = 50/119 (42%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ C G + L + D+V NS++ CR+GD ++RK++E
Sbjct: 164 LINGLCLEGKVSKAVVLVDRMVENGCQPDMVTYNSIVNGICRSGDTSLAFDMLRKMEERN 223
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEA 119
+ D T+ +I C++ A +M KG + +SL+ L K ++
Sbjct: 224 VKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDG 282
Score = 38.1 bits (87), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 35/134 (26%), Positives = 56/134 (41%), Gaps = 3/134 (2%)
Query: 3 SAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAIS 62
SA R+ F E +++ LN M+ +CR V+ K+ +L
Sbjct: 96 SAIARTKQFNLVLDFCKQLELNGIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYE 155
Query: 63 PDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSV 122
PD TF+ LI C E A + M G QP+ +S++ G R+ +L+
Sbjct: 156 PDTTTFNTLINGLCLEGKVSKAVVLVDRMVENGCQPDMVTYNSIVN--GICRSGDTSLA- 212
Query: 123 YNMLRYSKRSMCKA 136
++MLR + KA
Sbjct: 213 FDMLRKMEERNVKA 226
Score = 35.4 bits (80), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 25/133 (18%), Positives = 59/133 (44%), Gaps = 2/133 (1%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ C++G + + L D ++ +V+ N +L + + G ++ + +++
Sbjct: 269 LVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRG 328
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
ISP+ T++ L+ +C + A + M R P+ +SLI ++ + +
Sbjct: 329 ISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGM 388
Query: 121 SVYNMLRYSKRSM 133
V+ SKR +
Sbjct: 389 KVFR--NISKRGL 399
>gi|326513552|dbj|BAJ87795.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 538
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/98 (27%), Positives = 44/98 (44%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
MI +CR G ++ ++ E + DV N++ C CR ME ++ + E
Sbjct: 314 MIDGYCRHGMVDKALEIKAVMERMGIQLDVYTYNTLACGLCRVNRMEDAKKLLHIMTENG 373
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQP 98
+ +Y ++ LI KE + A R DM KG +P
Sbjct: 374 VESNYVSYTTLISIHSKEGDMVEARRLFRDMEGKGSRP 411
Score = 41.2 bits (95), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 18/77 (23%), Positives = 40/77 (51%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ FC+ G E + L D + + ++ ++ N+M+ YCR G ++ + + ++ +
Sbjct: 279 LINGFCKIGQIEAAEMLLTDMQLRGVGHNQIIFNTMIDGYCRHGMVDKALEIKAVMERMG 338
Query: 61 ISPDYNTFHILIKYFCK 77
I D T++ L C+
Sbjct: 339 IQLDVYTYNTLACGLCR 355
Score = 39.3 bits (90), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 22/95 (23%), Positives = 41/95 (43%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ +G + + + + + K DV ++++ AYCR G++ V +
Sbjct: 209 LVDGLSTAGDISKVESVFDEIKRKNVAGDVYFYSAVINAYCRAGNVRRASEVFDECVGNG 268
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKG 95
I P+ T+ LI FCK A + DM +G
Sbjct: 269 IEPNERTYGALINGFCKIGQIEAAEMLLTDMQLRG 303
Score = 38.1 bits (87), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 24/110 (21%), Positives = 48/110 (43%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
MI + +SG E ++ + E K DV +++ +C G ++ + + ++ +
Sbjct: 419 MIDGYIKSGSIREAERFKKEMEKKGLVPDVYTYAALVHGHCVNGKVDVALRLFEEMKQRG 478
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHL 110
P+ + LI KE A++ +M G P++ L S L+ L
Sbjct: 479 AKPNVVAYTALISGLAKEGRSEEAFQFYDNMLAAGLTPDDTLYSMLVGSL 528
>gi|295830911|gb|ADG39124.1| AT5G21222-like protein [Capsella grandiflora]
Length = 166
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/131 (26%), Positives = 57/131 (43%), Gaps = 2/131 (1%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+++A R F L E K D +L N+++ A +G+++ M + K+ E
Sbjct: 16 LVTALTRQKHFHSLLSLISKVEKNGLKPDTILFNAIINASSESGNLDQAMKIFEKMKESG 75
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGH-QPEEELCSSLIFHLGKMRAHSEA 119
P +TF+ LIK + K + R + M R QP + C+ L+ R EA
Sbjct: 76 CKPTTSTFNTLIKGYGKIGKLEESSRLLELMLRDEMLQPNDRTCNILVQAWCNQRKIEEA 135
Query: 120 LS-VYNMLRYS 129
+ VY M Y
Sbjct: 136 WNIVYKMQSYG 146
>gi|225428586|ref|XP_002281132.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g15980-like [Vitis vinifera]
Length = 492
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/148 (26%), Positives = 68/148 (45%), Gaps = 3/148 (2%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+++AFC G E ++L + K ++D++ N+++ +CR G++E + R+++
Sbjct: 286 LMAAFCDEGRMGEVEKLWEEMRMKKMEHDIMAYNTIIGGFCRIGEIERGEELFREMELSG 345
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
I T+ LI +C+ A DM RKG + E +I L R EAL
Sbjct: 346 IQSTCVTYEHLINGYCEIGDVDSAVLLYKDMCRKGFRAEARTVDGMILLLCNNRRVHEAL 405
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISG 148
+LR + ++ A K LI G
Sbjct: 406 ---KLLRVAMGNVEFAPRGKSYETLIKG 430
Score = 35.4 bits (80), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 33/143 (23%), Positives = 54/143 (37%), Gaps = 36/143 (25%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVM---------- 50
+I FCR G E ++L + E + V ++ YC GD++S +
Sbjct: 321 IIGGFCRIGEIERGEELFREMELSGIQSTCVTYEHLINGYCEIGDVDSAVLLYKDMCRKG 380
Query: 51 ---------------------HVMRKLDELAI-----SPDYNTFHILIKYFCKEKMYMLA 84
H KL +A+ +P ++ LIK FC+E A
Sbjct: 381 FRAEARTVDGMILLLCNNRRVHEALKLLRVAMGNVEFAPRGKSYETLIKGFCEEGKMEEA 440
Query: 85 YRTMVDMHRKGHQPEEELCSSLI 107
+ +M KG +P E+ S+ I
Sbjct: 441 SKLQSEMVGKGFKPTLEIYSAFI 463
>gi|242084770|ref|XP_002442810.1| hypothetical protein SORBIDRAFT_08g003240 [Sorghum bicolor]
gi|241943503|gb|EES16648.1| hypothetical protein SORBIDRAFT_08g003240 [Sorghum bicolor]
Length = 722
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 45/100 (45%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I A C G E ++ D + V + AYCR G++ S RK+ E
Sbjct: 559 LIHAHCERGLLREARKFFKDMISDGLAPSAVTYTVFIHAYCRRGNLYSAYGWFRKMLEEG 618
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEE 100
+ P+ T+++LI C+ LAYR +M +G P +
Sbjct: 619 VEPNEITYNVLIHALCRTGRTQLAYRHFHEMLERGLVPNK 658
Score = 44.7 bits (104), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 40/155 (25%), Positives = 68/155 (43%), Gaps = 5/155 (3%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
MI +SG E + + A + DV+ NS+L YC+ G ++ + + L
Sbjct: 349 MIHGLLQSGQVEAAQVKFVEMRAMGLQPDVITYNSLLNGYCKAGSLKEALLLFGDLRHAG 408
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
++P T++ILI +C+ A R +M +G P ++C+ I G A S A+
Sbjct: 409 LAPTVLTYNILIDGYCRLGDLEEARRLKEEMVEQGCLP--DVCTYTILMKGSHNACSLAM 466
Query: 121 S---VYNMLRYSKRSMCKALHEKILHILISGKLLK 152
+ ML + C A + +I L G + K
Sbjct: 467 AREFFDEMLSKGLQPDCFAYNTRIRAELTLGAIAK 501
Score = 38.1 bits (87), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 29/103 (28%), Positives = 44/103 (42%), Gaps = 10/103 (9%)
Query: 2 ISAFCRSGCFEET-----KQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKL 56
I A+CR G K L E Y+V ++ A CRTG + ++
Sbjct: 595 IHAYCRRGNLYSAYGWFRKMLEEGVEPNEITYNV-----LIHALCRTGRTQLAYRHFHEM 649
Query: 57 DELAISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPE 99
E + P+ T+ +LI CKE + A R +MH+ G P+
Sbjct: 650 LERGLVPNKYTYTLLIDGNCKEGNWEDAMRFYFEMHQNGIHPD 692
>gi|295830909|gb|ADG39123.1| AT5G21222-like protein [Capsella grandiflora]
gi|295830919|gb|ADG39128.1| AT5G21222-like protein [Capsella grandiflora]
Length = 166
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/131 (26%), Positives = 57/131 (43%), Gaps = 2/131 (1%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+++A R F L E K D +L N+++ A +G+++ M + K+ E
Sbjct: 16 LVTALTRQKHFHSLLSLISKVEKNGLKPDTILFNAIINASSESGNLDQAMKIFEKMKESG 75
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGH-QPEEELCSSLIFHLGKMRAHSEA 119
P +TF+ LIK + K + R + M R QP + C+ L+ R EA
Sbjct: 76 CKPTTSTFNTLIKGYGKJGKLEESSRLLELMLRDEMLQPNDRTCNILVQAWCNQRKIEEA 135
Query: 120 LS-VYNMLRYS 129
+ VY M Y
Sbjct: 136 WNIVYKMQSYG 146
>gi|115474201|ref|NP_001060699.1| Os07g0688100 [Oryza sativa Japonica Group]
gi|33146488|dbj|BAC79597.1| membrane-associated salt-inducible protein-like [Oryza sativa
Japonica Group]
gi|50509161|dbj|BAD30301.1| membrane-associated salt-inducible protein-like [Oryza sativa
Japonica Group]
gi|113612235|dbj|BAF22613.1| Os07g0688100 [Oryza sativa Japonica Group]
gi|215678726|dbj|BAG95163.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222637719|gb|EEE67851.1| hypothetical protein OsJ_25651 [Oryza sativa Japonica Group]
Length = 665
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/128 (25%), Positives = 62/128 (48%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+IS F R+G E+ + + + DVV N +L YC G + +++RK++
Sbjct: 376 LISGFWRAGSIEKAYKTVSFMQRNGCEPDVVTYNILLNHYCSIGMTDKAENLIRKMEMSG 435
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
++PD +++IL+K CK A+ + D G + C+ LI + + + AL
Sbjct: 436 VNPDRYSYNILLKGLCKAHQLDKAFAFVSDHMEVGGFCDIVSCNILIDAFCRAKKVNSAL 495
Query: 121 SVYNMLRY 128
+++ + Y
Sbjct: 496 NLFKEMGY 503
Score = 41.2 bits (95), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 37/151 (24%), Positives = 66/151 (43%), Gaps = 10/151 (6%)
Query: 1 MISAFCRSGCFEETKQLAGD---FEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLD 57
I+A C+S E ++L D F D + + LC + R D + ++ K+
Sbjct: 236 WITALCQSNRIELVEELLTDMDKFGCFPDFWACNIYVHYLCGHNRLYD---ALQMVEKMT 292
Query: 58 ELAISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHS 117
PD T+ ++ C + + A +M R+G +P+ C +LIF L K +
Sbjct: 293 MKGTGPDVVTYTTVVSCLCDHRRFSEAVGLWEEMVRRGLKPDVVACGALIFGLCKNQKVD 352
Query: 118 EALSVYNMLRYSKRSMCKALHEKILHILISG 148
EA + + + ++ L+ I + LISG
Sbjct: 353 EAFELASRM----LTLDIQLNVSIYNALISG 379
Score = 40.8 bits (94), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 29/127 (22%), Positives = 53/127 (41%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I AFCR+ L + K + D V ++ G + ++
Sbjct: 481 LIDAFCRAKKVNSALNLFKEMGYKGIQADAVTYGILINGLFGIGYSNLAEELFDQMLNTK 540
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
I P+ N ++I++ CK + A + M +K P+ ++LI+ LGK EAL
Sbjct: 541 IVPNVNVYNIMLHNLCKVGHFKHAQKIFWQMTQKEVSPDTVTFNTLIYWLGKSSRAVEAL 600
Query: 121 SVYNMLR 127
++ +R
Sbjct: 601 DLFKEMR 607
Score = 37.4 bits (85), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 21/99 (21%), Positives = 43/99 (43%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C++ +E +LA + +V + N+++ + R G +E + +
Sbjct: 341 LIFGLCKNQKVDEAFELASRMLTLDIQLNVSIYNALISGFWRAGSIEKAYKTVSFMQRNG 400
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPE 99
PD T++IL+ ++C M A + M G P+
Sbjct: 401 CEPDVVTYNILLNHYCSIGMTDKAENLIRKMEMSGVNPD 439
Score = 35.0 bits (79), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 22/99 (22%), Positives = 44/99 (44%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++S C F E L + + K DVV +++ C+ ++ + ++ L
Sbjct: 306 VVSCLCDHRRFSEAVGLWEEMVRRGLKPDVVACGALIFGLCKNQKVDEAFELASRMLTLD 365
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPE 99
I + + ++ LI F + AY+T+ M R G +P+
Sbjct: 366 IQLNVSIYNALISGFWRAGSIEKAYKTVSFMQRNGCEPD 404
>gi|356529489|ref|XP_003533323.1| PREDICTED: pentatricopeptide repeat-containing protein At1g12300,
mitochondrial-like [Glycine max]
Length = 550
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/126 (24%), Positives = 58/126 (46%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C+SG +L +V+ N ML A C+ ++ + + + E
Sbjct: 399 LIDGLCKSGRISYAWELFSAIHDGGPSPNVITYNIMLDALCKIQLVDKAIELFNLMFERG 458
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
++P+ ++++ILI +CK K A +MHR+ P+ + LI L K S A
Sbjct: 459 LTPNVSSYNILINGYCKSKRIDEAMNLFEEMHRRNLVPDSVTYNCLIDGLCKSGRISHAW 518
Query: 121 SVYNML 126
++N++
Sbjct: 519 ELFNVM 524
Score = 43.9 bits (102), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 31/126 (24%), Positives = 53/126 (42%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I A C+ G + + + + D+V N+++ YC D+ + E
Sbjct: 294 LIDALCKKGMLGKAHDMRNLMIERGQRPDLVTFNTLMSGYCLYNDVVEARKLFDTFAECG 353
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
I+PD +++ILI +CK A M+ K P SSLI L K S A
Sbjct: 354 ITPDVWSYNILIIGYCKNNRIDEALSLFNKMNYKKLAPNIVTYSSLIDGLCKSGRISYAW 413
Query: 121 SVYNML 126
+++ +
Sbjct: 414 ELFSAI 419
Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 25/126 (19%), Positives = 56/126 (44%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++S +C E ++L F DV N ++ YC+ ++ + + K++
Sbjct: 329 LMSGYCLYNDVVEARKLFDTFAECGITPDVWSYNILIIGYCKNNRIDEALSLFNKMNYKK 388
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
++P+ T+ LI CK A+ +H G P + ++ L K++ +A+
Sbjct: 389 LAPNIVTYSSLIDGLCKSGRISYAWELFSAIHDGGPSPNVITYNIMLDALCKIQLVDKAI 448
Query: 121 SVYNML 126
++N++
Sbjct: 449 ELFNLM 454
Score = 41.2 bits (95), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 55/131 (41%), Gaps = 2/131 (1%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKL-DEL 59
+I FC G + E +L D + +V N ++ A C+ G M H MR L E
Sbjct: 259 LIHGFCGLGQWREVTRLLCDMVDRNVNLNVYTYNILIDALCKKG-MLGKAHDMRNLMIER 317
Query: 60 AISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEA 119
PD TF+ L+ +C + A + G P+ + LI K EA
Sbjct: 318 GQRPDLVTFNTLMSGYCLYNDVVEARKLFDTFAECGITPDVWSYNILIIGYCKNNRIDEA 377
Query: 120 LSVYNMLRYSK 130
LS++N + Y K
Sbjct: 378 LSLFNKMNYKK 388
Score = 38.5 bits (88), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 21/99 (21%), Positives = 43/99 (43%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ C+ G E + L D + DV ++ +C G V ++ + +
Sbjct: 224 IVDGLCKDGLVTEARDLYSDVVGRGIDPDVFTYTCLIHGFCGLGQWREVTRLLCDMVDRN 283
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPE 99
++ + T++ILI CK+ M A+ M +G +P+
Sbjct: 284 VNLNVYTYNILIDALCKKGMLGKAHDMRNLMIERGQRPD 322
Score = 36.6 bits (83), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 22/91 (24%), Positives = 39/91 (42%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ C+ G E +L E + + +VV+ N ++ C+ G + + +
Sbjct: 189 LINGLCKIGLTREAFELLHKMEGQVVRPNVVIYNMIVDGLCKDGLVTEARDLYSDVVGRG 248
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDM 91
I PD T+ LI FC + R + DM
Sbjct: 249 IDPDVFTYTCLIHGFCGLGQWREVTRLLCDM 279
Score = 36.2 bits (82), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 24/123 (19%), Positives = 54/123 (43%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I +C++ +E L K ++V +S++ C++G + + + +
Sbjct: 364 LIIGYCKNNRIDEALSLFNKMNYKKLAPNIVTYSSLIDGLCKSGRISYAWELFSAIHDGG 423
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
SP+ T++I++ CK ++ A M +G P + LI K + EA+
Sbjct: 424 PSPNVITYNIMLDALCKIQLVDKAIELFNLMFERGLTPNVSSYNILINGYCKSKRIDEAM 483
Query: 121 SVY 123
+++
Sbjct: 484 NLF 486
>gi|242041853|ref|XP_002468321.1| hypothetical protein SORBIDRAFT_01g043770 [Sorghum bicolor]
gi|241922175|gb|EER95319.1| hypothetical protein SORBIDRAFT_01g043770 [Sorghum bicolor]
Length = 794
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 44/99 (44%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I A+C+ G E+ Q Y K DVV N+++ C G +E + + E
Sbjct: 567 IIHAYCKEGDLEKAFQFHNKMLENYFKPDVVTCNTLMNGLCLHGKLEKAIKLFESWAEKG 626
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPE 99
D T++ LI+ CK+ A DM +G QP+
Sbjct: 627 KKVDVITYNTLIQALCKDGDVDTALHFFADMEARGLQPD 665
Score = 45.1 bits (105), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 25/93 (26%), Positives = 50/93 (53%)
Query: 27 KYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYMLAYR 86
K +V N ++ CR G +E + ++ + E ++PD T++ LI +CK + A+
Sbjct: 383 KSSLVTHNIVVKGLCREGQLEEALGRLKMMTEEGLAPDVITYNTLIDAYCKARNVAKAFV 442
Query: 87 TMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEA 119
M +M R G + + ++L+++L K + + EA
Sbjct: 443 LMDEMVRSGLKMDTFTLNTLLYNLCKEKRYEEA 475
Score = 40.8 bits (94), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 33/148 (22%), Positives = 65/148 (43%), Gaps = 4/148 (2%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ CR G EE + DV+ N+++ AYC+ ++ +M ++
Sbjct: 392 VVKGLCREGQLEEALGRLKMMTEEGLAPDVITYNTLIDAYCKARNVAKAFVLMDEMVRSG 451
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ D T + L+ CKEK Y A + ++G P+E +++ K AL
Sbjct: 452 LKMDTFTLNTLLYNLCKEKRYEEAEELLRSPPQRGFVPDEVSYGTVMAAYFKENKPEPAL 511
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISG 148
+++ + SKR + +++ + LI G
Sbjct: 512 YLWDEM--SKRKLTPSIY--TYNTLIKG 535
Score = 37.4 bits (85), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 27/128 (21%), Positives = 56/128 (43%), Gaps = 1/128 (0%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ A CR G E + L + + N+++ AY R G ++ +V+ +
Sbjct: 251 LLKAHCRKGMLGEARTLLARMKKEGIAPTRATYNTLVSAYARLGWIKQATNVVEAMTAFG 310
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDM-HRKGHQPEEELCSSLIFHLGKMRAHSEA 119
PD T+++L C+ A++ +M H P+ ++L+ K + S+A
Sbjct: 311 FEPDLWTYNVLAAGLCQAGKVDEAFKLKDEMEHLSIVSPDVVTYNTLVDACFKYQRSSDA 370
Query: 120 LSVYNMLR 127
L++ +R
Sbjct: 371 LNLLEEMR 378
Score = 36.6 bits (83), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 18/90 (20%), Positives = 41/90 (45%)
Query: 33 LNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYMLAYRTMVDMH 92
N ++ +C G + + + + +SPD T++ L+K C++ M A + M
Sbjct: 213 FNLLVHTHCSKGTLADALSTLSTMQGFGLSPDVVTYNTLLKAHCRKGMLGEARTLLARMK 272
Query: 93 RKGHQPEEELCSSLIFHLGKMRAHSEALSV 122
++G P ++L+ ++ +A +V
Sbjct: 273 KEGIAPTRATYNTLVSAYARLGWIKQATNV 302
>gi|218200292|gb|EEC82719.1| hypothetical protein OsI_27404 [Oryza sativa Indica Group]
Length = 665
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/128 (25%), Positives = 62/128 (48%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+IS F R+G E+ + + + DVV N +L YC G + +++RK++
Sbjct: 376 LISGFWRAGSIEKAYKTVSFMQRNGCEPDVVTYNILLNHYCSIGMTDKAENLIRKMEMSG 435
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
++PD +++IL+K CK A+ + D G + C+ LI + + + AL
Sbjct: 436 VNPDRYSYNILLKGLCKAHQLDKAFAFVSDHMEVGGFCDIVSCNILIDAFCRAKKVNSAL 495
Query: 121 SVYNMLRY 128
+++ + Y
Sbjct: 496 NLFKEMGY 503
Score = 41.2 bits (95), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 37/151 (24%), Positives = 66/151 (43%), Gaps = 10/151 (6%)
Query: 1 MISAFCRSGCFEETKQLAGD---FEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLD 57
I+A C+S E ++L D F D + + LC + R D + ++ K+
Sbjct: 236 WITALCQSNRIELVEELLTDMDKFGCFPDFWACNIYVHYLCGHNRLYD---ALQMVEKMT 292
Query: 58 ELAISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHS 117
PD T+ ++ C + + A +M R+G +P+ C +LIF L K +
Sbjct: 293 MKGTGPDVVTYTTVVSCLCDHRRFSEAVGLWEEMVRRGLKPDVVACGALIFGLCKNQKVD 352
Query: 118 EALSVYNMLRYSKRSMCKALHEKILHILISG 148
EA + + + ++ L+ I + LISG
Sbjct: 353 EAFELASRM----LTLDIQLNVSIYNALISG 379
Score = 40.8 bits (94), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 29/127 (22%), Positives = 53/127 (41%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I AFCR+ L + K + D V ++ G + ++
Sbjct: 481 LIDAFCRAKKVNSALNLFKEMGYKGIQADAVTYGILINGLFGIGYSNLAEELFDQMLNTK 540
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
I P+ N ++I++ CK + A + M +K P+ ++LI+ LGK EAL
Sbjct: 541 IVPNVNVYNIMLHNLCKVGHFKHAQKIFWQMTQKEVSPDTVTFNTLIYWLGKSSRAVEAL 600
Query: 121 SVYNMLR 127
++ +R
Sbjct: 601 DLFKEMR 607
Score = 37.4 bits (85), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 21/99 (21%), Positives = 43/99 (43%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C++ +E +LA + +V + N+++ + R G +E + +
Sbjct: 341 LIFGLCKNQKVDEAFELASRMLTLDIQLNVSIYNALISGFWRAGSIEKAYKTVSFMQRNG 400
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPE 99
PD T++IL+ ++C M A + M G P+
Sbjct: 401 CEPDVVTYNILLNHYCSIGMTDKAENLIRKMEMSGVNPD 439
Score = 35.0 bits (79), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 22/99 (22%), Positives = 44/99 (44%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++S C F E L + + K DVV +++ C+ ++ + ++ L
Sbjct: 306 VVSCLCDHRRFSEAVGLWEEMVRRGLKPDVVACGALIFGLCKNQKVDEAFELASRMLTLD 365
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPE 99
I + + ++ LI F + AY+T+ M R G +P+
Sbjct: 366 IQLNVSIYNALISGFWRAGSIEKAYKTVSFMQRNGCEPD 404
>gi|15225055|ref|NP_181456.1| lateral organ junction protein [Arabidopsis thaliana]
gi|75100007|sp|O80958.1|PP194_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At2g39230, mitochondrial; AltName: Full=Protein LATERAL
ORGAN JUNCTION; Flags: Precursor
gi|3402682|gb|AAC28985.1| unknown protein [Arabidopsis thaliana]
gi|330254554|gb|AEC09648.1| lateral organ junction protein [Arabidopsis thaliana]
Length = 867
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 59/127 (46%)
Query: 5 FCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPD 64
FC+ G + E K + +VV N+M+ A+CR +M+ + ++ E + P+
Sbjct: 459 FCKQGKVDAATSFLKMMEQKGIEPNVVFYNNMMLAHCRMKNMDLARSIFSEMLEKGLEPN 518
Query: 65 YNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVYN 124
T+ ILI F K K A+ + M+ + E + +++I L K+ S+A +
Sbjct: 519 NFTYSILIDGFFKNKDEQNAWDVINQMNASNFEANEVIYNTIINGLCKVGQTSKAKEMLQ 578
Query: 125 MLRYSKR 131
L KR
Sbjct: 579 NLIKEKR 585
Score = 44.7 bits (104), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 26/124 (20%), Positives = 55/124 (44%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I AF + G EE ++ + V+ S++ YC+ ++ + + +++E
Sbjct: 316 VIVAFVKEGNMEEAVRVMDEMVGFGIPMSVIAATSLVNGYCKGNELGKALDLFNRMEEEG 375
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
++PD F +++++FCK A + M P L ++I K + AL
Sbjct: 376 LAPDKVMFSVMVEWFCKNMEMEKAIEFYMRMKSVRIAPSSVLVHTMIQGCLKAESPEAAL 435
Query: 121 SVYN 124
++N
Sbjct: 436 EIFN 439
Score = 40.0 bits (92), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 24/86 (27%), Positives = 41/86 (47%), Gaps = 3/86 (3%)
Query: 1 MISAFCRSGCFEETKQLAGDF--EAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDE 58
+I+ C+ G + K++ + E +Y NS++ + + GD +S + R++ E
Sbjct: 560 IINGLCKVGQTSKAKEMLQNLIKEKRY-SMSCTSYNSIIDGFVKVGDTDSAVETYREMSE 618
Query: 59 LAISPDYNTFHILIKYFCKEKMYMLA 84
SP+ TF LI FCK LA
Sbjct: 619 NGKSPNVVTFTSLINGFCKSNRMDLA 644
Score = 39.7 bits (91), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 26/118 (22%), Positives = 51/118 (43%), Gaps = 3/118 (2%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I F + G + + + +VV S++ +C++ M+ + + ++ +
Sbjct: 596 IIDGFVKVGDTDSAVETYREMSENGKSPNVVTFTSLINGFCKSNRMDLALEMTHEMKSME 655
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIF---HLGKMRA 115
+ D + LI FCK+ AY ++ G P + +SLI +LGKM A
Sbjct: 656 LKLDLPAYGALIDGFCKKNDMKTAYTLFSELPELGLMPNVSVYNSLISGFRNLGKMDA 713
Score = 36.6 bits (83), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 23/112 (20%), Positives = 49/112 (43%)
Query: 34 NSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHR 93
N + +C+ G +++ ++ +++ I P+ ++ ++ C+ K LA +M
Sbjct: 453 NKIFLLFCKQGKVDAATSFLKMMEQKGIEPNVVFYNNMMLAHCRMKNMDLARSIFSEMLE 512
Query: 94 KGHQPEEELCSSLIFHLGKMRAHSEALSVYNMLRYSKRSMCKALHEKILHIL 145
KG +P S LI K + A V N + S + ++ I++ L
Sbjct: 513 KGLEPNNFTYSILIDGFFKNKDEQNAWDVINQMNASNFEANEVIYNTIINGL 564
>gi|449463822|ref|XP_004149630.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g49730-like [Cucumis sativus]
Length = 641
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/107 (24%), Positives = 52/107 (48%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ +CR G E K + + + D+V+ N++L Y + G M ++ ++ ++
Sbjct: 252 LLYGWCREGKIMEAKHVLVQIKEAGFEPDIVVYNNLLGGYAQAGKMRDAFDLLAEMKKVN 311
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLI 107
P+ +F ILI+ FCK + A R +M G + + ++LI
Sbjct: 312 CGPNAASFTILIQSFCKTEKMDEAMRIFTEMQGSGCEADVVTYTTLI 358
Score = 44.3 bits (103), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 26/129 (20%), Positives = 57/129 (44%), Gaps = 1/129 (0%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ A C++G +E L D +++ ++ S+L +CR G + HV+ ++ E
Sbjct: 218 LLDALCKNGSVKEAASLFEDMRVRFNP-NLRHFTSLLYGWCREGKIMEAKHVLVQIKEAG 276
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
PD ++ L+ + + A+ + +M + P + LI K EA+
Sbjct: 277 FEPDIVVYNNLLGGYAQAGKMRDAFDLLAEMKKVNCGPNAASFTILIQSFCKTEKMDEAM 336
Query: 121 SVYNMLRYS 129
++ ++ S
Sbjct: 337 RIFTEMQGS 345
Score = 36.2 bits (82), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 23/99 (23%), Positives = 48/99 (48%), Gaps = 2/99 (2%)
Query: 1 MISAFCRSGCFEETKQLAGD-FEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDEL 59
+IS FC+ G ++ ++ D + +D + L M+ A+ + ++E M ++ ++ ++
Sbjct: 357 LISGFCKWGNTDKAYEILDDMIQKGHDPSQLSYLCIMM-AHEKKEELEECMELIEEMRKI 415
Query: 60 AISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQP 98
PD N ++ +I+ CK A R +M G P
Sbjct: 416 GCVPDLNIYNTMIRLVCKLGDLKEAVRLWGEMQAGGLNP 454
>gi|357121428|ref|XP_003562422.1| PREDICTED: pentatricopeptide repeat-containing protein At1g13040,
mitochondrial-like [Brachypodium distachyon]
Length = 663
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/128 (25%), Positives = 59/128 (46%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+IS F R+G ++ ++ + D+V N +L YC G ME ++RK++
Sbjct: 374 LISGFWRAGSIDKAYKIISFMRTNGCEPDIVTYNILLNHYCTIGMMEKAEKLIRKMETSG 433
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
++PD +++ L+K CK A+ + D G + C+ LI K + AL
Sbjct: 434 VNPDRYSYNQLLKGLCKTHQLDKAFAFVSDHMEVGGFCDTVSCNILIDAFCKTKKVKSAL 493
Query: 121 SVYNMLRY 128
++ + Y
Sbjct: 494 ELFKEMGY 501
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 29/121 (23%), Positives = 52/121 (42%)
Query: 2 ISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAI 61
ISA C+S E ++L D + D+ N + C+ + + ++ K+
Sbjct: 235 ISALCQSNRIELVQELLVDMDKLGCSPDIWACNIYIYYLCKQNRLPDALQMVEKMRTKGT 294
Query: 62 SPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEALS 121
SPD T+ ++ C K + A +M ++ +P+ C +LIF L K EA
Sbjct: 295 SPDVVTYQTVVSGLCDNKKFAEAIGLWEEMVKRDLKPDVFSCGALIFGLCKNNKVDEAFE 354
Query: 122 V 122
+
Sbjct: 355 L 355
Score = 41.2 bits (95), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 28/127 (22%), Positives = 57/127 (44%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I AFC++ + +L + K + D V +++ G + ++
Sbjct: 479 LIDAFCKTKKVKSALELFKEMGYKGMQADAVTYGTLINGLFSVGYYNLAEELFEQMLNAQ 538
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
I P+ N ++I++ + CK + A M +K P+ ++LI+ LGK EAL
Sbjct: 539 IDPNVNLYNIMLHHLCKVGHFKRAQTIFSHMIQKEVSPDTVTFNTLIYWLGKRSRAIEAL 598
Query: 121 SVYNMLR 127
+++ +R
Sbjct: 599 NLFKDMR 605
Score = 40.8 bits (94), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 22/87 (25%), Positives = 43/87 (49%)
Query: 37 LCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGH 96
+ A C++ +E V ++ +D+L SPD +I I Y CK+ A + + M KG
Sbjct: 235 ISALCQSNRIELVQELLVDMDKLGCSPDIWACNIYIYYLCKQNRLPDALQMVEKMRTKGT 294
Query: 97 QPEEELCSSLIFHLGKMRAHSEALSVY 123
P+ +++ L + +EA+ ++
Sbjct: 295 SPDVVTYQTVVSGLCDNKKFAEAIGLW 321
Score = 37.7 bits (86), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 28/119 (23%), Positives = 52/119 (43%)
Query: 29 DVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYMLAYRTM 88
+V L N ML C+ G + + + + +SPD TF+ LI + K + A
Sbjct: 542 NVNLYNIMLHHLCKVGHFKRAQTIFSHMIQKEVSPDTVTFNTLIYWLGKRSRAIEALNLF 601
Query: 89 VDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVYNMLRYSKRSMCKALHEKILHILIS 147
DM +G +P+ LI L + A V+ + + + + + E+++ +L S
Sbjct: 602 KDMRTRGVEPDTLTFKYLISGLLDEGKSTLAYEVWEYMMENGIILDREVSERLISVLKS 660
Score = 37.4 bits (85), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 20/99 (20%), Positives = 44/99 (44%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C++ +E +LA + V + N+++ + R G ++ ++ +
Sbjct: 339 LIFGLCKNNKVDEAFELASRMLTLDIELSVCIYNALISGFWRAGSIDKAYKIISFMRTNG 398
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPE 99
PD T++IL+ ++C M A + + M G P+
Sbjct: 399 CEPDIVTYNILLNHYCTIGMMEKAEKLIRKMETSGVNPD 437
>gi|356522220|ref|XP_003529745.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At4g26680, mitochondrial-like, partial [Glycine
max]
Length = 437
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 50/99 (50%)
Query: 29 DVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYMLAYRTM 88
+V LN + AYC G+++ + K+ + +SP+ +F+ LI +C + ++ LA +
Sbjct: 167 NVYTLNMAIRAYCMLGEVQKGFEMSXKMMGMVLSPNVVSFNTLISGYCNKGLFGLALKVK 226
Query: 89 VDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVYNMLR 127
M G QP ++LI K R EA V+N ++
Sbjct: 227 SLMGENGVQPNVVTFNTLINGFCKERKRHEANRVFNEMK 265
Score = 42.4 bits (98), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 42/84 (50%), Gaps = 6/84 (7%)
Query: 27 KYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFC---KEKMYML 83
K D++ +N+++ C+ G + +R+LD+ + + +TF LI C + L
Sbjct: 297 KADILTINALILGLCKDGKTKKAAGFVRELDKENLVSNXSTFSALITGLCVRNNSERPFL 356
Query: 84 AYRTMVDMHRKGHQPEEELCSSLI 107
YR+MV R G+ P E + LI
Sbjct: 357 IYRSMV---RSGYSPNEHIFQMLI 377
>gi|218192338|gb|EEC74765.1| hypothetical protein OsI_10532 [Oryza sativa Indica Group]
Length = 533
Score = 48.5 bits (114), Expect = 0.001, Method: Composition-based stats.
Identities = 30/98 (30%), Positives = 47/98 (47%), Gaps = 3/98 (3%)
Query: 2 ISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAI 61
I + CR+G K L E K KYDVV N+++ +C GD++ V + +
Sbjct: 368 IRSLCRAGKLRLAKCL---IENKGIKYDVVAFNTLIHGFCIAGDLDRVQQTRTDMINRDV 424
Query: 62 SPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPE 99
P+ T +LI CKE+ + A R ++D G P+
Sbjct: 425 IPNNFTDAMLIDSLCKERKFGEAKRFVLDSLVNGLVPD 462
>gi|147854551|emb|CAN78573.1| hypothetical protein VITISV_020581 [Vitis vinifera]
Length = 381
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/127 (24%), Positives = 57/127 (44%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
M+ C+ G +E +L G K +VV+ +++ +C+ ++ + + RK+
Sbjct: 216 MLDGLCKDGLVQEAMKLFGLMREKGTIPEVVIYTAVVEGFCKARQLDDAVRIFRKMQNNG 275
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
ISP+ ++ +LI+ K +A V+M GH P LI K + EA
Sbjct: 276 ISPNAFSYTVLIRGMYKGNRLDIAVDFCVEMLEAGHSPNVATLVDLIHEFCKEKGVEEAK 335
Query: 121 SVYNMLR 127
+V L+
Sbjct: 336 NVIVTLK 342
>gi|449529622|ref|XP_004171797.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
mitochondrial-like [Cucumis sativus]
Length = 618
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/166 (22%), Positives = 71/166 (42%), Gaps = 36/166 (21%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C+ G +E K+L + +A+ DV+ ++++ +C G + H+ ++ +
Sbjct: 243 IIDGLCKVGREDEAKELFEEMKAQGMIPDVISYSTLIHGFCCAGKWDQSKHLFDEMVDQG 302
Query: 61 ISPDYNTFHILIKYFCKEKMY------------------MLAYRTMVD------------ 90
+ PD TF +LI CKE ++ Y +++D
Sbjct: 303 VQPDMVTFSVLIDTLCKEGKVTEAKKLLEVMIQRGIVPNLITYNSLIDGFCMVGDLNSAR 362
Query: 91 -----MHRKGHQPEEELCSSLIFHLGKMRAHSEALSVYN-MLRYSK 130
M KG +P+E ++LI K EA+++YN ML+ K
Sbjct: 363 ELFLSMPSKGLEPDEISYTTLINGYCKTWKVKEAMNLYNEMLQVGK 408
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/94 (25%), Positives = 46/94 (48%), Gaps = 4/94 (4%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
MI FC+ G + L E D++ N++LC +C +E V+ ++ K+ +
Sbjct: 523 MIHGFCKVGQVDNANILFEKMEENGCTPDIIAYNTLLCGFCEGNKLEEVIKLLHKMVQKD 582
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRK 94
+SP+ + I++ CK++ Y+ VD+ K
Sbjct: 583 VSPNAASCTIVVDMLCKDE----KYKKFVDLLPK 612
Score = 43.1 bits (100), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 23/107 (21%), Positives = 49/107 (45%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C++G E +L + + DVV N M+ +C+ G +++ + K++E
Sbjct: 488 LIDGLCKAGKLETAWELFEKLSQEGLQPDVVTYNIMIHGFCKVGQVDNANILFEKMEENG 547
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLI 107
+PD ++ L+ FC+ + + M +K P C+ ++
Sbjct: 548 CTPDIIAYNTLLCGFCEGNKLEEVIKLLHKMVQKDVSPNAASCTIVV 594
Score = 42.7 bits (99), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 22/98 (22%), Positives = 44/98 (44%)
Query: 2 ISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAI 61
+ C++ C E +L + ++ K ++ + ++ C+ G +E+ + KL + +
Sbjct: 454 LDGLCKNDCLFEAMELFNELKSYNFKLNIENYSCLIDGLCKAGKLETAWELFEKLSQEGL 513
Query: 62 SPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPE 99
PD T++I+I FCK A M G P+
Sbjct: 514 QPDVVTYNIMIHGFCKVGQVDNANILFEKMEENGCTPD 551
Score = 39.3 bits (90), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 26/116 (22%), Positives = 48/116 (41%), Gaps = 3/116 (2%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C+ G E K+L + +++ NS++ +C GD+ S + +
Sbjct: 313 LIDTLCKEGKVTEAKKLLEVMIQRGIVPNLITYNSLIDGFCMVGDLNSARELFLSMPSKG 372
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSL---IFHLGKM 113
+ PD ++ LI +CK A +M + G P +L +F GK+
Sbjct: 373 LEPDEISYTTLINGYCKTWKVKEAMNLYNEMLQVGKSPNVTTYGTLLKGLFQKGKV 428
>gi|20279450|gb|AAM18730.1|AC092548_8 hypothetical protein [Oryza sativa Japonica Group]
Length = 729
Score = 48.5 bits (114), Expect = 0.001, Method: Composition-based stats.
Identities = 22/70 (31%), Positives = 38/70 (54%)
Query: 29 DVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYMLAYRTM 88
D+V N+++ C G M+ V H++R+LD + P+ +TF LI +CK + A + +
Sbjct: 572 DIVTYNALILGLCNEGKMKKVEHLLRELDRAKLEPNASTFSALIVGWCKMQNSERALQLL 631
Query: 89 VDMHRKGHQP 98
M + G P
Sbjct: 632 NVMKKSGFHP 641
Score = 42.0 bits (97), Expect = 0.080, Method: Composition-based stats.
Identities = 23/78 (29%), Positives = 39/78 (50%), Gaps = 1/78 (1%)
Query: 31 VLLNSMLCAYCRTG-DMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYMLAYRTMV 89
V N+++ AYCR G D + + K+++ + PD T+ +I CKE A + +
Sbjct: 468 VSFNTLIAAYCRDGVDAGPALQLKMKMEQEGLVPDVVTYDTIIHGLCKEGRMGKANQVLS 527
Query: 90 DMHRKGHQPEEELCSSLI 107
+M KG P ++LI
Sbjct: 528 EMRVKGVMPNTVTYNTLI 545
Score = 41.6 bits (96), Expect = 0.11, Method: Composition-based stats.
Identities = 22/114 (19%), Positives = 51/114 (44%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C G ++ + L + + + + ++++ +C+ + E + ++ + +
Sbjct: 579 LILGLCNEGKMKKVEHLLRELDRAKLEPNASTFSALIVGWCKMQNSERALQLLNVMKKSG 638
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMR 114
P+Y T+ ++I FCK K A M DM + P++ L + L K +
Sbjct: 639 FHPNYTTYKMVISSFCKNKDLEGAVDVMGDMLGRCIAPDKALLNEFFDGLWKAK 692
Score = 40.0 bits (92), Expect = 0.35, Method: Composition-based stats.
Identities = 28/129 (21%), Positives = 53/129 (41%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C+ G + Q+ + K + V N+++ Y GD V ++ +
Sbjct: 509 IIHGLCKEGRMGKANQVLSEMRVKGVMPNTVTYNTLIHGYVALGDNAMAGRVHEEMVKNR 568
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ D T++ LI C E + ++ R +P S+LI KM+ AL
Sbjct: 569 VELDIVTYNALILGLCNEGKMKKVEHLLRELDRAKLEPNASTFSALIVGWCKMQNSERAL 628
Query: 121 SVYNMLRYS 129
+ N+++ S
Sbjct: 629 QLLNVMKKS 637
>gi|222612695|gb|EEE50827.1| hypothetical protein OsJ_31237 [Oryza sativa Japonica Group]
Length = 550
Score = 48.5 bits (114), Expect = 0.001, Method: Composition-based stats.
Identities = 22/70 (31%), Positives = 38/70 (54%)
Query: 29 DVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYMLAYRTM 88
D+V N+++ C G M+ V H++R+LD + P+ +TF LI +CK + A + +
Sbjct: 393 DIVTYNALILGLCNEGKMKKVEHLLRELDRAKLEPNASTFSALIVGWCKMQNSERALQLL 452
Query: 89 VDMHRKGHQP 98
M + G P
Sbjct: 453 NVMKKSGFHP 462
Score = 42.0 bits (97), Expect = 0.080, Method: Composition-based stats.
Identities = 23/78 (29%), Positives = 39/78 (50%), Gaps = 1/78 (1%)
Query: 31 VLLNSMLCAYCRTG-DMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYMLAYRTMV 89
V N+++ AYCR G D + + K+++ + PD T+ +I CKE A + +
Sbjct: 289 VSFNTLIAAYCRDGVDAGPALQLKMKMEQEGLVPDVVTYDTIIHGLCKEGRMGKANQVLS 348
Query: 90 DMHRKGHQPEEELCSSLI 107
+M KG P ++LI
Sbjct: 349 EMRVKGVMPNTVTYNTLI 366
Score = 41.6 bits (96), Expect = 0.11, Method: Composition-based stats.
Identities = 22/114 (19%), Positives = 51/114 (44%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C G ++ + L + + + + ++++ +C+ + E + ++ + +
Sbjct: 400 LILGLCNEGKMKKVEHLLRELDRAKLEPNASTFSALIVGWCKMQNSERALQLLNVMKKSG 459
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMR 114
P+Y T+ ++I FCK K A M DM + P++ L + L K +
Sbjct: 460 FHPNYTTYKMVISSFCKNKDLEGAVDVMGDMLGRCIAPDKALLNEFFDGLWKAK 513
Score = 40.0 bits (92), Expect = 0.35, Method: Composition-based stats.
Identities = 28/129 (21%), Positives = 53/129 (41%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C+ G + Q+ + K + V N+++ Y GD V ++ +
Sbjct: 330 IIHGLCKEGRMGKANQVLSEMRVKGVMPNTVTYNTLIHGYVALGDNAMAGRVHEEMVKNR 389
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ D T++ LI C E + ++ R +P S+LI KM+ AL
Sbjct: 390 VELDIVTYNALILGLCNEGKMKKVEHLLRELDRAKLEPNASTFSALIVGWCKMQNSERAL 449
Query: 121 SVYNMLRYS 129
+ N+++ S
Sbjct: 450 QLLNVMKKS 458
>gi|12324355|gb|AAG52147.1|AC022355_8 hypothetical protein; 57683-56685 [Arabidopsis thaliana]
Length = 332
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/123 (25%), Positives = 55/123 (44%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
MI +FCRSG + + +QL D + DVV ++++ A + G + + +
Sbjct: 117 MIDSFCRSGRWTDAEQLLRDMIERQINPDVVTFSALINALVKEGKVSEAEEIYGDMLRRG 176
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
I P T++ +I FCK+ A R + M K P+ S+LI K + +
Sbjct: 177 IFPTTITYNSMIDGFCKQDRLNDAKRMLDSMASKSCSPDVVTFSTLINGYCKAKRVDNGM 236
Query: 121 SVY 123
++
Sbjct: 237 EIF 239
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/159 (22%), Positives = 69/159 (43%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+A + G E +++ GD + + NSM+ +C+ + ++ + +
Sbjct: 152 LINALVKEGKVSEAEEIYGDMLRRGIFPTTITYNSMIDGFCKQDRLNDAKRMLDSMASKS 211
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
SPD TF LI +CK K +MHR+G ++LI ++ A
Sbjct: 212 CSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQ 271
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLKDAYIVVK 159
+ N++ S + + +L L S K L+ A+ +++
Sbjct: 272 DLLNVMISSGVAPNYITFQSMLASLCSKKELRKAFAILE 310
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/128 (27%), Positives = 60/128 (46%), Gaps = 1/128 (0%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ C+ G E L E + K VV+ N+++ C+ G ++ ++ +
Sbjct: 47 IINGLCKMGDTESALNLLSKMEETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMHDKG 106
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
I PD T+ +I FC+ + A + + DM + P+ S+LI L K SEA
Sbjct: 107 IFPDVITYSGMIDSFCRSGRWTDAEQLLRDMIERQINPDVVTFSALINALVKEGKVSEAE 166
Query: 121 SVY-NMLR 127
+Y +MLR
Sbjct: 167 EIYGDMLR 174
Score = 44.7 bits (104), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 30/107 (28%), Positives = 47/107 (43%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C+ G + L + K DV+ + M+ ++CR+G ++R + E
Sbjct: 82 IIDRLCKDGHHIHAQNLFTEMHDKGIFPDVITYSGMIDSFCRSGRWTDAEQLLRDMIERQ 141
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLI 107
I+PD TF LI KE A DM R+G P +S+I
Sbjct: 142 INPDVVTFSALINALVKEGKVSEAEEIYGDMLRRGIFPTTITYNSMI 188
Score = 37.0 bits (84), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 16/107 (14%), Positives = 51/107 (47%), Gaps = 6/107 (5%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ +C++ + ++ + + + V +++ +C+ GD+++ ++ +
Sbjct: 222 LINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNVMISSG 281
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLI 107
++P+Y TF ++ C +K A+ + D+ + E+C ++
Sbjct: 282 VAPNYITFQSMLASLCSKKELRKAFAILEDLQKS------EVCPRIV 322
>gi|125528152|gb|EAY76266.1| hypothetical protein OsI_04202 [Oryza sativa Indica Group]
Length = 528
Score = 48.5 bits (114), Expect = 0.001, Method: Composition-based stats.
Identities = 30/107 (28%), Positives = 49/107 (45%)
Query: 13 ETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILI 72
E K+ E K K DVV SM+ + + G +++VM + ++ E + PD ++ ++
Sbjct: 267 EAKRFWNAMEIKGIKRDVVSYGSMISCFSKAGSLDTVMKLFNRMKEAGVVPDRKIYNAVV 326
Query: 73 KYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEA 119
K + A + M KG P+ +SLI L K R EA
Sbjct: 327 YALAKGRCVNEAKALVRSMEEKGVAPDTATFNSLIRPLCKARQVQEA 373
Score = 42.4 bits (98), Expect = 0.058, Method: Composition-based stats.
Identities = 31/134 (23%), Positives = 59/134 (44%), Gaps = 6/134 (4%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
MIS F ++G + +L + D + N+++ A + + ++R ++E
Sbjct: 290 MISCFSKAGSLDTVMKLFNRMKEAGVVPDRKIYNAVVYALAKGRCVNEAKALVRSMEEKG 349
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
++PD TF+ LI+ CK + A + + DM +G P S FH + +
Sbjct: 350 VAPDTATFNSLIRPLCKARQVQEARKMLDDMLGRGLSP-----SVRTFH-ALLDVARSPI 403
Query: 121 SVYNMLRYSKRSMC 134
V+++L K C
Sbjct: 404 EVFDLLDKMKELQC 417
>gi|242063942|ref|XP_002453260.1| hypothetical protein SORBIDRAFT_04g002660 [Sorghum bicolor]
gi|241933091|gb|EES06236.1| hypothetical protein SORBIDRAFT_04g002660 [Sorghum bicolor]
Length = 866
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/107 (27%), Positives = 54/107 (50%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+ISA C+ G F+E K+ + K D V+ ++ + YC+ G + V+R +++
Sbjct: 520 LISALCKEGRFDEAKKKLLEMIVKDISPDSVIYDTFIHGYCKHGKTSLAIKVLRDMEKKG 579
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLI 107
+P T+++LI+ F ++ + M +M KG P +SLI
Sbjct: 580 CNPSTRTYNLLIRGFEEKHKSEEIMKLMSEMKEKGISPNVMTYNSLI 626
Score = 43.5 bits (101), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 23/110 (20%), Positives = 54/110 (49%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++S C+ G + +++ + DVV S+L AYC G++ + ++ ++ +
Sbjct: 357 IVSGLCKEGKAFDARRVENFIRSGVMSPDVVTYTSLLHAYCSKGNIAAANRILDEMAQKG 416
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHL 110
+P+ T+++L++ + A R + M+ KG+ + C+ +I L
Sbjct: 417 CAPNSFTYNVLLQSLWRAGRTTEAERLLERMNEKGYSLDTAGCNIIIDGL 466
Score = 42.7 bits (99), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 24/99 (24%), Positives = 47/99 (47%), Gaps = 5/99 (5%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDE-- 58
+++ FC+ G EE ++L + +VV N+ + A C+ G + + + + E
Sbjct: 213 VVAGFCKEGLVEEAERLVERMRVQGLAPNVVTFNARISALCKAGRVLDAYRIFQDMQEDW 272
Query: 59 --LAISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKG 95
PD TF +++ FC + ++ R +VD+ R G
Sbjct: 273 QHGLPRPDQVTFDVMLSGFC-DAGFVDEARVLVDIMRCG 310
Score = 40.4 bits (93), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 24/91 (26%), Positives = 40/91 (43%), Gaps = 10/91 (10%)
Query: 1 MISAFCRSGCFEETKQLA-----GDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRK 55
M+S FC +G +E + L G F + + Y N L R G + ++R+
Sbjct: 287 MLSGFCDAGFVDEARVLVDIMRCGGFLRRVESY-----NRWLSGLVRNGRVGEAQELLRE 341
Query: 56 LDELAISPDYNTFHILIKYFCKEKMYMLAYR 86
+ I P+ T++I++ CKE A R
Sbjct: 342 MAHEGIQPNSYTYNIIVSGLCKEGKAFDARR 372
Score = 40.4 bits (93), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 22/90 (24%), Positives = 43/90 (47%), Gaps = 6/90 (6%)
Query: 4 AFCRSG-CFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAIS 62
+CR+G + K L G ++V+ N+++ +C+ G +E ++ ++ ++
Sbjct: 185 GYCRAGRSIDALKVLDG-----MPSMNLVVCNTVVAGFCKEGLVEEAERLVERMRVQGLA 239
Query: 63 PDYNTFHILIKYFCKEKMYMLAYRTMVDMH 92
P+ TF+ I CK + AYR DM
Sbjct: 240 PNVVTFNARISALCKAGRVLDAYRIFQDMQ 269
Score = 36.6 bits (83), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 17/66 (25%), Positives = 38/66 (57%)
Query: 12 EETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHIL 71
EE +L + + K +V+ NS++ ++C+ G + M ++ ++ + + P+ +F +L
Sbjct: 601 EEIMKLMSEMKEKGISPNVMTYNSLIKSFCQQGMVNKAMPLLDEMLQNELVPNITSFDLL 660
Query: 72 IKYFCK 77
IK +CK
Sbjct: 661 IKAYCK 666
>gi|345293243|gb|AEN83113.1| AT5G21222-like protein, partial [Capsella rubella]
gi|345293245|gb|AEN83114.1| AT5G21222-like protein, partial [Capsella rubella]
gi|345293247|gb|AEN83115.1| AT5G21222-like protein, partial [Capsella rubella]
gi|345293249|gb|AEN83116.1| AT5G21222-like protein, partial [Capsella rubella]
gi|345293251|gb|AEN83117.1| AT5G21222-like protein, partial [Capsella rubella]
gi|345293253|gb|AEN83118.1| AT5G21222-like protein, partial [Capsella rubella]
gi|345293255|gb|AEN83119.1| AT5G21222-like protein, partial [Capsella rubella]
gi|345293257|gb|AEN83120.1| AT5G21222-like protein, partial [Capsella rubella]
Length = 160
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/131 (26%), Positives = 57/131 (43%), Gaps = 2/131 (1%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+++A R F L E K D +L N+++ A +G+++ M + K+ E
Sbjct: 10 LVTALTRQKHFHSLLSLISKVEKNGLKPDTILFNAIINASSESGNLDQAMKIFEKMKESG 69
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGH-QPEEELCSSLIFHLGKMRAHSEA 119
P +TF+ LIK + K + R + M R QP + C+ L+ R EA
Sbjct: 70 CKPTTSTFNTLIKGYGKIGKLEESSRLLELMLRDEMLQPNDRTCNILVQAWCNQRKIEEA 129
Query: 120 LS-VYNMLRYS 129
+ VY M Y
Sbjct: 130 WNIVYKMQSYG 140
>gi|297829236|ref|XP_002882500.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297328340|gb|EFH58759.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 871
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/155 (21%), Positives = 71/155 (45%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I F + G +E + + K +V NS+L A + ++ + + + EL
Sbjct: 663 LIDGFGKVGRIDEAYLILEELMQKGLTPNVYTWNSLLDALVKAEEINEALVCFQSMKELK 722
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+P+ T+ ILI CK + + A+ +M ++G +P +++I L K +EA
Sbjct: 723 CTPNQVTYGILINGLCKVRKFNKAFVFWQEMQKQGMKPSTISYTTMISGLAKAGNIAEAG 782
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLKDAY 155
++++ + + A + ++ L +G DA+
Sbjct: 783 ALFDRFKANGGVPDSACYNAMIEGLSNGNRAMDAF 817
Score = 39.7 bits (91), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 29/128 (22%), Positives = 57/128 (44%), Gaps = 1/128 (0%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
MI + +G F+E L AK V+ N +L + G ++ + V ++ + A
Sbjct: 314 MIMGYGSAGKFDEAYSLLERQRAKGSIPSVIAYNCILTCLRKMGKVDEALRVFEEMKKDA 373
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+P+ +T++ILI C+ A+ M + G P + ++ L K + EA
Sbjct: 374 -APNLSTYNILIDMLCRAGKLDCAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEAC 432
Query: 121 SVYNMLRY 128
+++ + Y
Sbjct: 433 AIFEQMDY 440
Score = 35.8 bits (81), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 30/113 (26%), Positives = 49/113 (43%), Gaps = 8/113 (7%)
Query: 11 FEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHI 70
FEE K+ A + Y+ +L MLC R G ++ + + + + P+ T +I
Sbjct: 366 FEEMKKDAAPNLSTYN-----ILIDMLC---RAGKLDCAFELRDSMQKAGLFPNVRTVNI 417
Query: 71 LIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVY 123
++ CK + A M K P+E SLI LGK+ +A +Y
Sbjct: 418 MVDRLCKSQKLDEACAIFEQMDYKVCTPDEITFCSLIDGLGKVGRVDDAYKIY 470
>gi|224111844|ref|XP_002316000.1| predicted protein [Populus trichocarpa]
gi|222865040|gb|EEF02171.1| predicted protein [Populus trichocarpa]
Length = 745
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/107 (25%), Positives = 50/107 (46%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ C G + + + DV L N M+ Y + GD+E + + ++L + A
Sbjct: 402 ILKGLCEKGMLSDARMYFDSLIMSNLRPDVTLYNIMIDGYVKLGDVEEAVRLYKRLRDKA 461
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLI 107
I+P TF+ LI FCK + + A R + + G +P ++L+
Sbjct: 462 ITPSIVTFNSLIYGFCKNRKVVEARRLLESIKLHGLEPSAVTYTTLM 508
Score = 42.4 bits (98), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 23/107 (21%), Positives = 54/107 (50%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I FC++ E ++L + + V +++ AYC G++ + ++ +++
Sbjct: 472 LIYGFCKNRKVVEARRLLESIKLHGLEPSAVTYTTLMNAYCEEGNINKLHELLLEMNLKD 531
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLI 107
I P T+ ++IK CK++ + + + DM KG P++ +++I
Sbjct: 532 IEPTVVTYTVVIKGLCKQRKLEESVQLLEDMRAKGLAPDQITYNTII 578
Score = 42.4 bits (98), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 20/78 (25%), Positives = 42/78 (53%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C+ G EE +L D + + +V+L + +L + C+ G ++ + ++ +++
Sbjct: 297 LICGHCQMGNIEEALRLRRDLLSSGFQLNVILYSVLLSSLCKRGQVDEALQLLYEMEANN 356
Query: 61 ISPDYNTFHILIKYFCKE 78
+ PD T+ ILI CK+
Sbjct: 357 LQPDLVTYSILIHGLCKQ 374
Score = 41.2 bits (95), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 30/128 (23%), Positives = 55/128 (42%)
Query: 27 KYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYMLAYR 86
K D+V ++C +C+ G++E + + R L + + +L+ CK A +
Sbjct: 288 KPDLVTYTVLICGHCQMGNIEEALRLRRDLLSSGFQLNVILYSVLLSSLCKRGQVDEALQ 347
Query: 87 TMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVYNMLRYSKRSMCKALHEKILHILI 146
+ +M QP+ S LI L K +A+ +Y + +++ H IL L
Sbjct: 348 LLYEMEANNLQPDLVTYSILIHGLCKQGKVQQAIQLYKEMCFNRIFPNSFAHSGILKGLC 407
Query: 147 SGKLLKDA 154
+L DA
Sbjct: 408 EKGMLSDA 415
Score = 38.5 bits (88), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 22/95 (23%), Positives = 42/95 (44%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C+ EE+ QL D AK D + N+++ +C+ DM ++ +
Sbjct: 542 VIKGLCKQRKLEESVQLLEDMRAKGLAPDQITYNTIIQCFCKAKDMRKAFELLDDMLIHN 601
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKG 95
+ P T+++LI C+ A R +V + +
Sbjct: 602 LEPTPATYNVLIDGLCRYGDVEDADRVLVSLQDRN 636
Score = 37.7 bits (86), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 23/107 (21%), Positives = 49/107 (45%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+++A+C G + +L + K + VV ++ C+ +E + ++ +
Sbjct: 507 LMNAYCEEGNINKLHELLLEMNLKDIEPTVVTYTVVIKGLCKQRKLEESVQLLEDMRAKG 566
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLI 107
++PD T++ +I+ FCK K A+ + DM +P + LI
Sbjct: 567 LAPDQITYNTIIQCFCKAKDMRKAFELLDDMLIHNLEPTPATYNVLI 613
Score = 36.2 bits (82), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 28/155 (18%), Positives = 64/155 (41%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
MI + + G EE +L K +V NS++ +C+ + ++ +
Sbjct: 437 MIDGYVKLGDVEEAVRLYKRLRDKAITPSIVTFNSLIYGFCKNRKVVEARRLLESIKLHG 496
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ P T+ L+ +C+E + +++M+ K +P + +I L K R E++
Sbjct: 497 LEPSAVTYTTLMNAYCEEGNINKLHELLLEMNLKDIEPTVVTYTVVIKGLCKQRKLEESV 556
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLKDAY 155
+ +R + + + I+ K ++ A+
Sbjct: 557 QLLEDMRAKGLAPDQITYNTIIQCFCKAKDMRKAF 591
>gi|297733951|emb|CBI15198.3| unnamed protein product [Vitis vinifera]
Length = 948
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 64/158 (40%), Gaps = 9/158 (5%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C EE L + + K + V N+++ YC+ G+ME + V ++ E
Sbjct: 374 LIKGLCGVDRMEEADGLLQEMKKKGFLPNAVTYNTLIDGYCKEGNMEKAIEVCSQMTEKG 433
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
I P+ TF LI +CK A +M KG P+ ++LI H +
Sbjct: 434 IEPNIITFSTLIDGYCKAGKMEAAMGLYTEMVIKGLLPDVVAYTALI------DGHFKDG 487
Query: 121 SVYNMLRYSKRSMCKALHEKI--LHILISGKLLKDAYI 156
+ R K LH + L LI G L KD I
Sbjct: 488 NTKEAFRLHKEMQEAGLHPNVFTLSCLIDG-LCKDGRI 524
Score = 43.9 bits (102), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 28/123 (22%), Positives = 56/123 (45%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I +C+ G E+ ++ K + +++ ++++ YC+ G ME+ M + ++
Sbjct: 409 LIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCKAGKMEAAMGLYTEMVIKG 468
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ PD + LI K+ A+R +M G P S LI L K S+A+
Sbjct: 469 LLPDVVAYTALIDGHFKDGNTKEAFRLHKEMQEAGLHPNVFTLSCLIDGLCKDGRISDAI 528
Query: 121 SVY 123
++
Sbjct: 529 KLF 531
Score = 39.7 bits (91), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 29/124 (23%), Positives = 51/124 (41%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I +C++G E L + E DV + ++ C ME +++++ +
Sbjct: 339 LIDGYCKAGNLSEALSLHSEIEKHEILPDVFTYSILIKGLCGVDRMEEADGLLQEMKKKG 398
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
P+ T++ LI +CKE A M KG +P S+LI K A+
Sbjct: 399 FLPNAVTYNTLIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCKAGKMEAAM 458
Query: 121 SVYN 124
+Y
Sbjct: 459 GLYT 462
Score = 38.9 bits (89), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 23/107 (21%), Positives = 49/107 (45%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C++ ++ D + ++ + N ++ YC+ G++ + + ++++
Sbjct: 304 LIDGLCKTDEMVSARKFLIDMASFGVVPNIFVYNCLIDGYCKAGNLSEALSLHSEIEKHE 363
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLI 107
I PD T+ ILIK C A + +M +KG P ++LI
Sbjct: 364 ILPDVFTYSILIKGLCGVDRMEEADGLLQEMKKKGFLPNAVTYNTLI 410
Score = 38.1 bits (87), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 46/91 (50%)
Query: 34 NSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHR 93
N+M+ YC+ ++ + + +++ + P+ TF ILI CK + A + ++DM
Sbjct: 267 NTMMDGYCKIAHVKKALELYQEMLGDGLLPNVVTFGILIDGLCKTDEMVSARKFLIDMAS 326
Query: 94 KGHQPEEELCSSLIFHLGKMRAHSEALSVYN 124
G P + + LI K SEALS+++
Sbjct: 327 FGVVPNIFVYNCLIDGYCKAGNLSEALSLHS 357
Score = 37.0 bits (84), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 23/99 (23%), Positives = 39/99 (39%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ + G F+ ++ GD A+ +VV +++ CR GD + ++ E
Sbjct: 164 VLDGLVKKGRFDTMWKVYGDMVARGASPNVVTYGTLIDGCCRQGDFLKAFRLFDEMIEKK 223
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPE 99
I P + ILI+ C E A M G P
Sbjct: 224 IFPTVVIYTILIRGLCGESRISEAESMFRTMRNSGMLPN 262
>gi|242047602|ref|XP_002461547.1| hypothetical protein SORBIDRAFT_02g004530 [Sorghum bicolor]
gi|241924924|gb|EER98068.1| hypothetical protein SORBIDRAFT_02g004530 [Sorghum bicolor]
Length = 696
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/115 (26%), Positives = 56/115 (48%)
Query: 29 DVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYMLAYRTM 88
+VV NS++ C+ M+ V++++ + I P+ T++ LI + + A R +
Sbjct: 286 NVVTCNSVIDGLCKVQAMDKAEAVLQQMIDEHIMPNCTTYNSLIHGYLSSGQWTEAVRIL 345
Query: 89 VDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVYNMLRYSKRSMCKALHEKILH 143
+M R G +P S LI L K H+EA ++N + S + + + +LH
Sbjct: 346 KEMSRDGQRPNVVTYSMLIDCLCKSGLHAEAREIFNSMIQSGQKPNASTYGSLLH 400
Score = 41.2 bits (95), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 28/125 (22%), Positives = 56/125 (44%)
Query: 2 ISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAI 61
I A+C+ G +E + + D+V +++ C+ G ++ M ++ + +
Sbjct: 434 IYAYCKCGRLDEASLTFNKMQQQGFMPDIVAYTTVIDGLCKIGRLDDAMSRFCQMIDDGL 493
Query: 62 SPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEALS 121
SPD TF+ LI F + A +M +G P +S+I L K +EA
Sbjct: 494 SPDIITFNTLIHGFALHGKWEKAEELFYEMMDRGIPPNVNTFNSMIDKLFKEGKVTEARK 553
Query: 122 VYNML 126
+++++
Sbjct: 554 LFDLM 558
Score = 35.8 bits (81), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 27/123 (21%), Positives = 54/123 (43%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C+SG E +++ K + S+L Y G++ + +V + +
Sbjct: 363 LIDCLCKSGLHAEAREIFNSMIQSGQKPNASTYGSLLHGYATEGNLVDMNNVKDLMVQNG 422
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ P + F+I I +CK A T M ++G P+ +++I L K+ +A+
Sbjct: 423 MRPGRHVFNIEIYAYCKCGRLDEASLTFNKMQQQGFMPDIVAYTTVIDGLCKIGRLDDAM 482
Query: 121 SVY 123
S +
Sbjct: 483 SRF 485
>gi|115451563|ref|NP_001049382.1| Os03g0216300 [Oryza sativa Japonica Group]
gi|108706849|gb|ABF94644.1| expressed protein [Oryza sativa Japonica Group]
gi|113547853|dbj|BAF11296.1| Os03g0216300 [Oryza sativa Japonica Group]
gi|215734993|dbj|BAG95715.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 533
Score = 48.1 bits (113), Expect = 0.001, Method: Composition-based stats.
Identities = 30/98 (30%), Positives = 47/98 (47%), Gaps = 3/98 (3%)
Query: 2 ISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAI 61
I + CR+G K L E K KYDVV N+++ +C GD++ V + +
Sbjct: 368 IRSLCRAGKLRLAKCL---IENKGIKYDVVAFNTLIHGFCIAGDLDRVQQTRTDMINRDV 424
Query: 62 SPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPE 99
P+ T +LI CKE+ + A R ++D G P+
Sbjct: 425 IPNNFTDAMLIDSLCKERKFGEAKRFVLDSLVNGLVPD 462
>gi|357499981|ref|XP_003620279.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355495294|gb|AES76497.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 585
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/126 (26%), Positives = 57/126 (45%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ FC+ +E K + + DVV NS++ YC ++ + + + +
Sbjct: 271 LVDGFCKDRKMKEGKTVFAMMMKQGIIPDVVTYNSLMDGYCLVKEVNTAKSIFNTMAQGG 330
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
++PD +++ILI FCK K A +MH K P +SLI L K S AL
Sbjct: 331 VNPDIRSYNILINGFCKIKKVDKAMNLFNEMHCKNIIPNVVTYNSLIDGLSKSGRISYAL 390
Query: 121 SVYNML 126
+ + +
Sbjct: 391 QLVDQM 396
Score = 36.6 bits (83), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 26/126 (20%), Positives = 57/126 (45%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C+ + L + +K +VV ++++ + G ++ + + K+
Sbjct: 201 VIYGMCKDKHVNDAFDLYSEMVSKGISPNVVTYSALISGFFVVGKLKDAIDLFNKIILEN 260
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
I PD TF+IL+ FCK++ M ++G P+ +SL+ ++ + A
Sbjct: 261 IKPDGYTFNILVDGFCKDRKMKEGKTVFAMMMKQGIIPDVVTYNSLMDGYCLVKEVNTAK 320
Query: 121 SVYNML 126
S++N +
Sbjct: 321 SIFNTM 326
Score = 36.6 bits (83), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 24/126 (19%), Positives = 56/126 (44%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ FC+ ++ L + K +VV NS++ ++G + + ++ ++ +
Sbjct: 341 LINGFCKIKKVDKAMNLFNEMHCKNIIPNVVTYNSLIDGLSKSGRISYALQLVDQMHDRG 400
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ P+ T++ +I K A + +G QP + LI L K+ + +
Sbjct: 401 VPPNILTYNSIIDALFKTHQVDKAIALITKFKDQGIQPSMYTYTILIDGLCKVEGYDITV 460
Query: 121 SVYNML 126
+ YN++
Sbjct: 461 NTYNVM 466
>gi|255570715|ref|XP_002526312.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223534393|gb|EEF36101.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 729
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/100 (25%), Positives = 47/100 (47%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I FCR G E L + + +++V N+++ CR GD+E+ + + +
Sbjct: 383 LIYGFCRLGNIGEAFILLDELRFRNLSFNIVTYNTLIDGLCRLGDLETALKLKEDMINRG 442
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEE 100
I PD T+ +L+ CK ++A +M G P++
Sbjct: 443 IHPDVVTYTVLVNGACKLGNMLMAKEFFDEMLHVGLAPDQ 482
Score = 44.7 bits (104), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 27/132 (20%), Positives = 59/132 (44%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ + G ++ K L + + N ++C YC+ G + + + ++
Sbjct: 278 LINGLSKKGELQQAKGLIQEMAKAGLRVSPYTYNPLICGYCKKGLLVEALALWEEMVTRG 337
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+SP + + ++ FCKE A + + DM +K P+ ++LI+ ++ EA
Sbjct: 338 VSPTVASHNTIMYGFCKEGKMSDARQQLSDMLKKNLMPDIISYNTLIYGFCRLGNIGEAF 397
Query: 121 SVYNMLRYSKRS 132
+ + LR+ S
Sbjct: 398 ILLDELRFRNLS 409
Score = 42.0 bits (97), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 28/116 (24%), Positives = 53/116 (45%)
Query: 8 SGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNT 67
+G E +++ D ++ VV ++ A+ G ++ M ++ E + P+ T
Sbjct: 565 NGHLREGREIFYDMLSRGQTPTVVTYTVLIHAHALNGRLDWAMAYFLEMQEKGVVPNVIT 624
Query: 68 FHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVY 123
+++LI FCK + A + ++M KG P + + LI M EAL +Y
Sbjct: 625 YNVLINGFCKVRKMDQACKFFIEMQEKGIFPNKYTYTILINENCNMGKWQEALRLY 680
Score = 39.3 bits (90), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 31/141 (21%), Positives = 61/141 (43%), Gaps = 15/141 (10%)
Query: 4 AFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISP 63
FC+ G + +Q D K D++ N+++ +CR G++ ++ +L +S
Sbjct: 351 GFCKEGKMSDARQQLSDMLKKNLMPDIISYNTLIYGFCRLGNIGEAFILLDELRFRNLSF 410
Query: 64 DYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVY 123
+ T++ LI C+ A + DM +G P+ + L+ + A +
Sbjct: 411 NIVTYNTLIDGLCRLGDLETALKLKEDMINRGIHPDVVTYTVLV---------NGACKLG 461
Query: 124 NMLRYSKRSMCKALHEKILHI 144
NML M K +++LH+
Sbjct: 462 NML------MAKEFFDEMLHV 476
Score = 37.4 bits (85), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 27/114 (23%), Positives = 52/114 (45%)
Query: 30 VVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYMLAYRTMV 89
V N+ML ++C+ G+++ + ++ K+ E P TF++LI K+ A +
Sbjct: 237 VTTYNTMLHSFCKGGEVQRALDLVPKMQERGCYPSEVTFNVLINGLSKKGELQQAKGLIQ 296
Query: 90 DMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVYNMLRYSKRSMCKALHEKILH 143
+M + G + + LI K EAL+++ + S A H I++
Sbjct: 297 EMAKAGLRVSPYTYNPLICGYCKKGLLVEALALWEEMVTRGVSPTVASHNTIMY 350
>gi|449461223|ref|XP_004148341.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g18940-like [Cucumis sativus]
gi|449507064|ref|XP_004162923.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g18940-like [Cucumis sativus]
Length = 844
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/98 (25%), Positives = 50/98 (51%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
M+S F ++ +E +++ + D+V NS++ Y R G+ +++ L +
Sbjct: 659 MLSIFAKNNMYERAQKMLDLIRESGLQPDLVTYNSLMNMYARRGECWKAEEILKGLIKSG 718
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQP 98
SPD +++ +IK FC++ + A R M +M +G P
Sbjct: 719 ESPDLVSYNTIIKGFCRQGLMQEAIRVMSEMTTRGICP 756
Score = 43.9 bits (102), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 26/129 (20%), Positives = 61/129 (47%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+ISA R G E K+ + ++ + V N++L + + G +++++++++
Sbjct: 309 VISACGREGLINEAKEFFVELKSSGYEPGTVTYNALLQVFGKAGIYSEALNILKEMEDNN 368
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ D T++ L+ + + Y + M RKG P +++I G+ +AL
Sbjct: 369 CTLDSVTYNELVAAYVRAGFYEEGATVIDTMTRKGVMPNAVTYTTVINAYGRAGKEVKAL 428
Query: 121 SVYNMLRYS 129
++N ++ S
Sbjct: 429 QLFNQMKKS 437
Score = 38.5 bits (88), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 30/137 (21%), Positives = 62/137 (45%), Gaps = 3/137 (2%)
Query: 26 DKY--DVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYML 83
DKY DV ++L AY R G + + + ++ + +SP T+++++ + K
Sbjct: 226 DKYSLDVRACTTILHAYSRNGKYKQAIAMFERMKDCGLSPSLVTYNVMLDVYGKMGRSWD 285
Query: 84 AYRTMVD-MHRKGHQPEEELCSSLIFHLGKMRAHSEALSVYNMLRYSKRSMCKALHEKIL 142
++D M +G Q +E CS++I G+ +EA + L+ S + +L
Sbjct: 286 KILDLLDEMRNEGLQFDEFTCSTVISACGREGLINEAKEFFVELKSSGYEPGTVTYNALL 345
Query: 143 HILISGKLLKDAYIVVK 159
+ + +A ++K
Sbjct: 346 QVFGKAGIYSEALNILK 362
Score = 38.1 bits (87), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 26/127 (20%), Positives = 53/127 (41%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ F ++G + E + + E D V N ++ AY R G E V+ +
Sbjct: 344 LLQVFGKAGIYSEALNILKEMEDNNCTLDSVTYNELVAAYVRAGFYEEGATVIDTMTRKG 403
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ P+ T+ +I + + + A + M + G P +S++ LGK E +
Sbjct: 404 VMPNAVTYTTVINAYGRAGKEVKALQLFNQMKKSGCVPNVCTYNSILALLGKKSRSEEMI 463
Query: 121 SVYNMLR 127
+ + +R
Sbjct: 464 KILSDMR 470
Score = 35.8 bits (81), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 25/121 (20%), Positives = 57/121 (47%), Gaps = 2/121 (1%)
Query: 1 MISAFCRSG-CFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDEL 59
+++ + R G C++ + L G ++ + D+V N+++ +CR G M+ + VM ++
Sbjct: 694 LMNMYARRGECWKAEEILKGLIKSG-ESPDLVSYNTIIKGFCRQGLMQEAIRVMSEMTTR 752
Query: 60 AISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEA 119
I P T++ + + M+ + M +K +P E ++ K R + +A
Sbjct: 753 GICPCIFTYNTFVSGYAGRGMFAEVDEVISYMIQKNCKPNELTYKIIVDGYCKARKYQDA 812
Query: 120 L 120
+
Sbjct: 813 M 813
>gi|225439731|ref|XP_002272943.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
chloroplastic [Vitis vinifera]
Length = 772
Score = 48.1 bits (113), Expect = 0.001, Method: Composition-based stats.
Identities = 27/112 (24%), Positives = 53/112 (47%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I FC++ EE +++ + E + +VV N+++ C+ +E +M ++
Sbjct: 497 LIDGFCKNKRIEEAEEIFDEMELQGISRNVVTYNTLIDGLCKNRRVEEAAQLMDQMLMEG 556
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGK 112
+ PD T++ L+ YFC+ A + M G +P+ +LI L K
Sbjct: 557 LKPDKFTYNSLLTYFCRAGDIKKAADIVQTMTSNGCEPDSVTYGTLILGLSK 608
Score = 47.4 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 34/129 (26%), Positives = 54/129 (41%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C+ G EE ++ + + V N+++ C+ +E + R L
Sbjct: 357 LIFGLCKLGEVEEAVEILNQMILRDFSPNTVTYNTLISTLCKENQVEEATELARVLTSKG 416
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
I PD TF+ LI+ C + LA +M KG P+E + LI L EAL
Sbjct: 417 ILPDVCTFNSLIQGLCLTNNHRLAMELFEEMKTKGCHPDEFTYNMLIDSLCSRGRLEEAL 476
Query: 121 SVYNMLRYS 129
S+ + S
Sbjct: 477 SLLKEMESS 485
Score = 44.7 bits (104), Expect = 0.013, Method: Composition-based stats.
Identities = 26/107 (24%), Positives = 52/107 (48%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I + C G EE L + E+ +VV N+++ +C+ +E + +++
Sbjct: 462 LIDSLCSRGRLEEALSLLKEMESSGCSRNVVTYNTLIDGFCKNKRIEEAEEIFDEMELQG 521
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLI 107
IS + T++ LI CK + A + M M +G +P++ +SL+
Sbjct: 522 ISRNVVTYNTLIDGLCKNRRVEEAAQLMDQMLMEGLKPDKFTYNSLL 568
Score = 44.3 bits (103), Expect = 0.015, Method: Composition-based stats.
Identities = 26/96 (27%), Positives = 47/96 (48%)
Query: 31 VLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYMLAYRTMVD 90
V +N ++ YC+ G +E V+ + ++ PD TF+ L+ C+ A +
Sbjct: 282 VTVNVLVHGYCKEGRIEEVLSFIDEMSNEGFRPDRFTFNSLVNGLCRIGHVKHALEILDV 341
Query: 91 MHRKGHQPEEELCSSLIFHLGKMRAHSEALSVYNML 126
M ++G P+ +SLIF L K+ EA+ + N +
Sbjct: 342 MLQEGFDPDIFTYNSLIFGLCKLGEVEEAVEILNQM 377
Score = 44.3 bits (103), Expect = 0.019, Method: Composition-based stats.
Identities = 31/123 (25%), Positives = 54/123 (43%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C++ EE QL + K D NS+L +CR GD++ +++ +
Sbjct: 532 LIDGLCKNRRVEEAAQLMDQMLMEGLKPDKFTYNSLLTYFCRAGDIKKAADIVQTMTSNG 591
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
PD T+ LI K LA R + + KG + + +I L + + SEA+
Sbjct: 592 CEPDSVTYGTLILGLSKAGRVELASRLLRTVQLKGMVLAPQTYNPVIKALFREKRTSEAV 651
Query: 121 SVY 123
++
Sbjct: 652 RLF 654
Score = 40.8 bits (94), Expect = 0.21, Method: Composition-based stats.
Identities = 35/144 (24%), Positives = 59/144 (40%), Gaps = 21/144 (14%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+IS C+ EE +LA +K DV NS++ C T + M + ++
Sbjct: 392 LISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTNNHRLAMELFEEMKTKG 451
Query: 61 ISPDYNTFHILIKYFC-----KEKMYML-------------AYRTMVDMHRKGHQPEEEL 102
PD T+++LI C +E + +L Y T++D K + EE
Sbjct: 452 CHPDEFTYNMLIDSLCSRGRLEEALSLLKEMESSGCSRNVVTYNTLIDGFCKNKRIEE-- 509
Query: 103 CSSLIFHLGKMRAHSEALSVYNML 126
+ IF +++ S + YN L
Sbjct: 510 -AEEIFDEMELQGISRNVVTYNTL 532
Score = 40.0 bits (92), Expect = 0.29, Method: Composition-based stats.
Identities = 27/127 (21%), Positives = 56/127 (44%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+++ CR G + ++ + D+ NS++ C+ G++E + ++ ++
Sbjct: 322 LVNGLCRIGHVKHALEILDVMLQEGFDPDIFTYNSLIFGLCKLGEVEEAVEILNQMILRD 381
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
SP+ T++ LI CKE A + KG P+ +SLI L H A+
Sbjct: 382 FSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTNNHRLAM 441
Query: 121 SVYNMLR 127
++ ++
Sbjct: 442 ELFEEMK 448
Score = 38.5 bits (88), Expect = 0.83, Method: Composition-based stats.
Identities = 27/108 (25%), Positives = 48/108 (44%), Gaps = 1/108 (0%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYD-KYDVVLLNSMLCAYCRTGDMESVMHVMRKLDEL 59
+I ++ + F+E + E ++ K D N +L ++ V V ++
Sbjct: 146 LIESYAKFELFDEAVAVVDIMEEEFGLKLDAFTYNFLLNVLVDGNKLKLVEIVNSRMVSR 205
Query: 60 AISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLI 107
I PD TF+ILIK C+ A M +M G P+E+ ++L+
Sbjct: 206 GIKPDVTTFNILIKALCRAHQIRPAILMMEEMGSYGLSPDEKTFTTLM 253
Score = 37.4 bits (85), Expect = 2.2, Method: Composition-based stats.
Identities = 27/126 (21%), Positives = 51/126 (40%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ +C+ G EE + + + D NS++ CR G ++ + ++ + +
Sbjct: 287 LVHGYCKEGRIEEVLSFIDEMSNEGFRPDRFTFNSLVNGLCRIGHVKHALEILDVMLQEG 346
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
PD T++ LI CK A + M + P ++LI L K EA
Sbjct: 347 FDPDIFTYNSLIFGLCKLGEVEEAVEILNQMILRDFSPNTVTYNTLISTLCKENQVEEAT 406
Query: 121 SVYNML 126
+ +L
Sbjct: 407 ELARVL 412
>gi|449494638|ref|XP_004159605.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g49730-like [Cucumis sativus]
Length = 664
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/107 (24%), Positives = 52/107 (48%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ +CR G E K + + + D+V+ N++L Y + G M ++ ++ ++
Sbjct: 275 LLYGWCREGKIMEAKHVLVQIKEAGFEPDIVVYNNLLGGYAQAGKMRDAFDLLAEMKKVN 334
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLI 107
P+ +F ILI+ FCK + A R +M G + + ++LI
Sbjct: 335 CGPNAASFTILIQSFCKTEKMDEAMRIFTEMQGSGCEADVVTYTTLI 381
Score = 44.3 bits (103), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 26/129 (20%), Positives = 57/129 (44%), Gaps = 1/129 (0%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ A C++G +E L D +++ ++ S+L +CR G + HV+ ++ E
Sbjct: 241 LLDALCKNGSVKEAASLFEDMRVRFNP-NLRHFTSLLYGWCREGKIMEAKHVLVQIKEAG 299
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
PD ++ L+ + + A+ + +M + P + LI K EA+
Sbjct: 300 FEPDIVVYNNLLGGYAQAGKMRDAFDLLAEMKKVNCGPNAASFTILIQSFCKTEKMDEAM 359
Query: 121 SVYNMLRYS 129
++ ++ S
Sbjct: 360 RIFTEMQGS 368
Score = 36.2 bits (82), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 23/99 (23%), Positives = 48/99 (48%), Gaps = 2/99 (2%)
Query: 1 MISAFCRSGCFEETKQLAGD-FEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDEL 59
+IS FC+ G ++ ++ D + +D + L M+ A+ + ++E M ++ ++ ++
Sbjct: 380 LISGFCKWGNTDKAYEILDDMIQKGHDPSQLSYLCIMM-AHEKKEELEECMELIEEMRKI 438
Query: 60 AISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQP 98
PD N ++ +I+ CK A R +M G P
Sbjct: 439 GCVPDLNIYNTMIRLVCKLGDLKEAVRLWGEMQAGGLNP 477
>gi|357439849|ref|XP_003590202.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355479250|gb|AES60453.1| Pentatricopeptide repeat protein [Medicago truncatula]
Length = 772
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/172 (25%), Positives = 74/172 (43%), Gaps = 18/172 (10%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C++G E + L + ++K ++V+ N+ + YCR G M+ + + +++
Sbjct: 363 LIGGVCKAGQMEAAEILLLEMQSKGVDLNLVIFNTTMDGYCRRGKMDEALRLQAIMEKKG 422
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPE--------EELC-------SS 105
I+ D T++IL CK Y A + M KG +P E C +
Sbjct: 423 INADVFTYNILANGLCKLHRYDEAKCILNSMVEKGVKPNVVTFTMFIEIYCKEGNLAEAE 482
Query: 106 LIFHLGKMRAHSEALSVYNML--RYSKRSMCKALHEKILHILISGKLLKDAY 155
+F + + + YN L Y K+ K H KI +I+ LL D Y
Sbjct: 483 RLFRDMEKKGEVPNIITYNTLIDAYCKKEKVKQAH-KIKSEMINKGLLPDLY 533
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 31/127 (24%), Positives = 60/127 (47%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+ + C+ ++E K + K K +VV + YC+ G++ + R +++
Sbjct: 433 LANGLCKLHRYDEAKCILNSMVEKGVKPNVVTFTMFIEIYCKEGNLAEAERLFRDMEKKG 492
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
P+ T++ LI +CK++ A++ +M KG P+ SSLI + EAL
Sbjct: 493 EVPNIITYNTLIDAYCKKEKVKQAHKIKSEMINKGLLPDLYTYSSLIHGECIVGRVDEAL 552
Query: 121 SVYNMLR 127
++N +R
Sbjct: 553 KLFNEMR 559
Score = 39.7 bits (91), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 24/95 (25%), Positives = 46/95 (48%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I + SG EE +++ + K + DV + +SM+ R G+M+ + ++ +
Sbjct: 293 LIQWYSSSGDIEEAEKIFEEMREKNIEMDVYVYSSMISWSRRLGNMKRAFALFDEMSQRD 352
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKG 95
I P+ +T+ LI CK A +++M KG
Sbjct: 353 IVPNAHTYGALIGGVCKAGQMEAAEILLLEMQSKG 387
>gi|297807255|ref|XP_002871511.1| hypothetical protein ARALYDRAFT_350399 [Arabidopsis lyrata subsp.
lyrata]
gi|297317348|gb|EFH47770.1| hypothetical protein ARALYDRAFT_350399 [Arabidopsis lyrata subsp.
lyrata]
Length = 1202
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/112 (26%), Positives = 56/112 (50%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+++A C+ G E+ +++ G AK + VL N+M+ Y R GD+ + +++
Sbjct: 733 LLNALCKEGQIEKAEEILGREMAKGLVPNEVLYNTMIDGYSRKGDLVGARMKIDAMEKQG 792
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGK 112
+ PD+ ++ LI+ FC+ A + + M KG P E + LI G+
Sbjct: 793 MKPDHLAYNCLIRTFCELGDMENAEQEVNKMKLKGVSPSVETYNILIGGYGR 844
Score = 42.4 bits (98), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 29/123 (23%), Positives = 51/123 (41%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C+ ++ +QL + A+ ++ N+++ YC+ G+ E V ++
Sbjct: 593 LIDGLCKVRQMKDAEQLFDEMLARRLLPSLITYNTLIDGYCKDGNPEKSFKVRERMKADN 652
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
I P TF+ L+K K M A + +M +G P+ S L AL
Sbjct: 653 IEPSLITFNTLLKGLFKAGMVEDAENVLTEMKDQGFVPDAFTFSILFDGYSSNDKADAAL 712
Query: 121 SVY 123
VY
Sbjct: 713 GVY 715
>gi|15238505|ref|NP_201359.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75180383|sp|Q9LSL9.1|PP445_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g65560
gi|8978284|dbj|BAA98175.1| unnamed protein product [Arabidopsis thaliana]
gi|110737310|dbj|BAF00601.1| hypothetical protein [Arabidopsis thaliana]
gi|332010688|gb|AED98071.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 915
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/125 (27%), Positives = 61/125 (48%), Gaps = 4/125 (3%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKY--DVVLLNSMLCAYCRTGDMESVMHVMRKLDE 58
++++ R G +E KQ+ E DK ++ N M+ YC+ G++E + K+ E
Sbjct: 189 LLNSLARFGLVDEMKQVY--MEMLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVSKIVE 246
Query: 59 LAISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSE 118
+ PD+ T+ LI +C+ K A++ +M KG + E + LI L R E
Sbjct: 247 AGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRIDE 306
Query: 119 ALSVY 123
A+ ++
Sbjct: 307 AMDLF 311
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/160 (21%), Positives = 72/160 (45%), Gaps = 34/160 (21%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I + C FE+ ++L G K +V+ N+++ YC+ G +E + V+ ++
Sbjct: 364 LIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRK 423
Query: 61 ISPDYNTFHILIKYFCKEKMY-----------------MLAYRTMVD------------- 90
+SP+ T++ LIK +CK ++ ++ Y +++D
Sbjct: 424 LSPNTRTYNELIKGYCKSNVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYR 483
Query: 91 ----MHRKGHQPEEELCSSLIFHLGKMRAHSEALSVYNML 126
M+ +G P++ +S+I L K + EA +++ L
Sbjct: 484 LLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSL 523
Score = 44.3 bits (103), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 73/159 (45%), Gaps = 5/159 (3%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I +C+S + L E K DVV NS++ CR+G+ +S ++ +++
Sbjct: 434 LIKGYCKSNVHKAMGVLNKMLERKVLP-DVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRG 492
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEA- 119
+ PD T+ +I CK K A + +KG P + ++LI K EA
Sbjct: 493 LVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAH 552
Query: 120 LSVYNMLRYSKRSMCKALH-EKILHILISGKLLKDAYIV 157
L + ML SK + +L ++H L + LK+A ++
Sbjct: 553 LMLEKML--SKNCLPNSLTFNALIHGLCADGKLKEATLL 589
Score = 44.3 bits (103), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 32/126 (25%), Positives = 55/126 (43%), Gaps = 16/126 (12%)
Query: 19 GDFEAKYDKYDVVL----------LNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTF 68
GDF+ Y ++ +L + + YCR G + +M K+ E +SPD T+
Sbjct: 616 GDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTY 675
Query: 69 HILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMR------AHSEALSV 122
LIK + A+ + M G +P + SLI HL +M+ + E ++
Sbjct: 676 SSLIKGYGDLGQTNFAFDVLKRMRDTGCEPSQHTFLSLIKHLLEMKYGKQKGSEPELCAM 735
Query: 123 YNMLRY 128
NM+ +
Sbjct: 736 SNMMEF 741
Score = 38.1 bits (87), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 30/112 (26%), Positives = 48/112 (42%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
MI + C+S EE L E K +VV+ +++ YC+ G ++ ++ K+
Sbjct: 503 MIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKN 562
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGK 112
P+ TF+ LI C + A M + G QP + LI L K
Sbjct: 563 CLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLK 614
Score = 35.4 bits (80), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 22/89 (24%), Positives = 47/89 (52%), Gaps = 1/89 (1%)
Query: 37 LCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHR-KG 95
LCA + ++V+ ++ K+ E +++P+ ++ LI C+ +A + M R +G
Sbjct: 732 LCAMSNMMEFDTVVELLEKMVEHSVTPNAKSYEKLILGICEVGNLRVAEKVFDHMQRNEG 791
Query: 96 HQPEEELCSSLIFHLGKMRAHSEALSVYN 124
P E + ++L+ K++ H+EA V +
Sbjct: 792 ISPSELVFNALLSCCCKLKKHNEAAKVVD 820
>gi|302786806|ref|XP_002975174.1| hypothetical protein SELMODRAFT_10825 [Selaginella moellendorffii]
gi|300157333|gb|EFJ23959.1| hypothetical protein SELMODRAFT_10825 [Selaginella moellendorffii]
Length = 555
Score = 48.1 bits (113), Expect = 0.001, Method: Composition-based stats.
Identities = 34/130 (26%), Positives = 57/130 (43%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
MI + ++G E L K D+V + Y R GD ++++ + R +++
Sbjct: 105 MIDLYGKAGRTAEAMDLYQTMRKNNWKPDLVSFGVIANVYSRVGDYQAILRLFRDMEQAE 164
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
I P+ F+ LI + LA +M G +P E S LI K+ A +AL
Sbjct: 165 IKPNVVLFNTLIGTLGRAGKVTLAKGMFDEMASYGLEPSEITLSILIDMYTKVGALDKAL 224
Query: 121 SVYNMLRYSK 130
VY+ ++ K
Sbjct: 225 DVYDTIKQKK 234
>gi|302791141|ref|XP_002977337.1| hypothetical protein SELMODRAFT_107186 [Selaginella moellendorffii]
gi|300154707|gb|EFJ21341.1| hypothetical protein SELMODRAFT_107186 [Selaginella moellendorffii]
Length = 636
Score = 48.1 bits (113), Expect = 0.001, Method: Composition-based stats.
Identities = 26/107 (24%), Positives = 51/107 (47%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ +C +G ++ ++L + A DV S++ +C+ G M V++++ +
Sbjct: 398 LVEGYCNAGLVDDAERLLEEMVASDCSPDVYTYTSLVDGFCKVGRMVEARRVLKRMAKRG 457
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLI 107
P+ T+ LI FC+ +AY+ + +M G QP SLI
Sbjct: 458 CQPNVVTYTALIDAFCRAGKPTVAYKLLEEMVGNGVQPNVITYRSLI 504
Score = 46.2 bits (108), Expect = 0.004, Method: Composition-based stats.
Identities = 32/131 (24%), Positives = 62/131 (47%), Gaps = 2/131 (1%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C++G E +L GD +AK+ DV+ + ++ +C+ ++ + + + A
Sbjct: 328 LIDGLCKTGRAPEANRLFGDMKAKFCNPDVITYSCLIGGFCKLERIDMARTLFDDMLKQA 387
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ PD TF L++ +C + A R + +M P+ +SL+ K+ EA
Sbjct: 388 VLPDVVTFSTLVEGYCNAGLVDDAERLLEEMVASDCSPDVYTYTSLVDGFCKVGRMVEAR 447
Query: 121 SVYNMLRYSKR 131
V + R +KR
Sbjct: 448 RV--LKRMAKR 456
Score = 43.5 bits (101), Expect = 0.027, Method: Composition-based stats.
Identities = 27/107 (25%), Positives = 50/107 (46%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I FC+ + + L D + DVV ++++ YC G ++ ++ ++
Sbjct: 363 LIGGFCKLERIDMARTLFDDMLKQAVLPDVVTFSTLVEGYCNAGLVDDAERLLEEMVASD 422
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLI 107
SPD T+ L+ FCK + A R + M ++G QP ++LI
Sbjct: 423 CSPDVYTYTSLVDGFCKVGRMVEARRVLKRMAKRGCQPNVVTYTALI 469
Score = 42.0 bits (97), Expect = 0.093, Method: Composition-based stats.
Identities = 29/124 (23%), Positives = 56/124 (45%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C++G + +++ + + +VV NS++ +C T ++S + +M ++
Sbjct: 258 LIDGLCKTGQVRDAQEVFKRMIVRGIEPNVVTYNSLIHGFCMTNGVDSALLLMEEMTATG 317
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
PD T++ LI CK A R DM K P+ S LI K+ A
Sbjct: 318 CLPDIITYNTLIDGLCKTGRAPEANRLFGDMKAKFCNPDVITYSCLIGGFCKLERIDMAR 377
Query: 121 SVYN 124
++++
Sbjct: 378 TLFD 381
Score = 41.2 bits (95), Expect = 0.13, Method: Composition-based stats.
Identities = 27/133 (20%), Positives = 61/133 (45%), Gaps = 1/133 (0%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLD-EL 59
+I AFCR+G +L + + +V+ S++ +C TGD+E ++ +L+ +
Sbjct: 468 LIDAFCRAGKPTVAYKLLEEMVGNGVQPNVITYRSLIGGFCGTGDLEEARKMLERLERDE 527
Query: 60 AISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEA 119
D + +++ C+ A + + + G P ++ +LI L + + +A
Sbjct: 528 NCKADMFAYRVMMDGLCRTGRMSAALELLEAIKQSGTPPRHDIYVALIRGLCQGKELGKA 587
Query: 120 LSVYNMLRYSKRS 132
+ V + S++S
Sbjct: 588 MEVLEEMTLSRKS 600
Score = 41.2 bits (95), Expect = 0.15, Method: Composition-based stats.
Identities = 26/123 (21%), Positives = 57/123 (46%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ FC+ L + + +VV ++++ +CR +++ + R++ E
Sbjct: 48 LINGFCKVHKVHRAYLLLKEMKESGLAPNVVTYSTVIHGFCRQTKVDTAYKLFRQMVENG 107
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
P+ T++ L+ C+ + AY + +M +G QP++ +L+ L K AL
Sbjct: 108 CMPNLVTYNTLLSGLCRNGLMDEAYELLDEMRERGLQPDKFSYDTLMAGLCKTGKIDMAL 167
Query: 121 SVY 123
V+
Sbjct: 168 KVF 170
Score = 40.4 bits (93), Expect = 0.25, Method: Composition-based stats.
Identities = 29/126 (23%), Positives = 54/126 (42%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+++ C++G + ++ D DVV ++++ C+TG ++ + K+ E +
Sbjct: 153 LMAGLCKTGKIDMALKVFEDNSNGDCPPDVVAYSTLIAGLCKTGRLDEACKLFEKMRENS 212
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
PD TF L+ CK A + + M + P SSLI L K +A
Sbjct: 213 CEPDVVTFTALMDGLCKGDRLQEAQQVLETMEDRNCTPNVITYSSLIDGLCKTGQVRDAQ 272
Query: 121 SVYNML 126
V+ +
Sbjct: 273 EVFKRM 278
Score = 40.0 bits (92), Expect = 0.31, Method: Composition-based stats.
Identities = 29/127 (22%), Positives = 52/127 (40%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I FCR + +L ++V N++L CR G M+ ++ ++ E
Sbjct: 83 VIHGFCRQTKVDTAYKLFRQMVENGCMPNLVTYNTLLSGLCRNGLMDEAYELLDEMRERG 142
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ PD ++ L+ CK +A + D P+ S+LI L K EA
Sbjct: 143 LQPDKFSYDTLMAGLCKTGKIDMALKVFEDNSNGDCPPDVVAYSTLIAGLCKTGRLDEAC 202
Query: 121 SVYNMLR 127
++ +R
Sbjct: 203 KLFEKMR 209
Score = 38.9 bits (89), Expect = 0.64, Method: Composition-based stats.
Identities = 28/127 (22%), Positives = 56/127 (44%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ C+ +E +Q+ E + +V+ +S++ C+TG + V +++
Sbjct: 223 LMDGLCKGDRLQEAQQVLETMEDRNCTPNVITYSSLIDGLCKTGQVRDAQEVFKRMIVRG 282
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
I P+ T++ LI FC A M +M G P+ ++LI L K EA
Sbjct: 283 IEPNVVTYNSLIHGFCMTNGVDSALLLMEEMTATGCLPDIITYNTLIDGLCKTGRAPEAN 342
Query: 121 SVYNMLR 127
++ ++
Sbjct: 343 RLFGDMK 349
Score = 36.6 bits (83), Expect = 3.1, Method: Composition-based stats.
Identities = 23/107 (21%), Positives = 46/107 (42%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ C++G +E +L + DVV +++ C+ ++ V+ +++
Sbjct: 188 LIAGLCKTGRLDEACKLFEKMRENSCEPDVVTFTALMDGLCKGDRLQEAQQVLETMEDRN 247
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLI 107
+P+ T+ LI CK A M +G +P +SLI
Sbjct: 248 CTPNVITYSSLIDGLCKTGQVRDAQEVFKRMIVRGIEPNVVTYNSLI 294
Score = 35.4 bits (80), Expect = 8.2, Method: Composition-based stats.
Identities = 23/127 (18%), Positives = 52/127 (40%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
MI C++ E + K + N ++ +C+ + +++++ E
Sbjct: 13 MIDGLCKANRLPEATTYFAKMKKKGTVPNEWTYNVLINGFCKVHKVHRAYLLLKEMKESG 72
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
++P+ T+ +I FC++ AY+ M G P ++L+ L + EA
Sbjct: 73 LAPNVVTYSTVIHGFCRQTKVDTAYKLFRQMVENGCMPNLVTYNTLLSGLCRNGLMDEAY 132
Query: 121 SVYNMLR 127
+ + +R
Sbjct: 133 ELLDEMR 139
>gi|125579821|gb|EAZ20967.1| hypothetical protein OsJ_36620 [Oryza sativa Japonica Group]
Length = 408
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/107 (26%), Positives = 49/107 (45%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I FC G L + + DVV +++ G + + V K+ E
Sbjct: 86 LIHGFCMRGELMVASDLLVEMMGRGHTPDVVTFGALIHGLVVAGKVSEALIVREKMTERQ 145
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLI 107
+ PD N +++LI CK++M A + +M K QP+E + ++LI
Sbjct: 146 VFPDVNIYNVLISGLCKKRMLPAAKNILEEMLEKNVQPDEFVYATLI 192
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/120 (26%), Positives = 59/120 (49%), Gaps = 4/120 (3%)
Query: 29 DVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYMLAYRTM 88
D++ N+++ C G + H +R+ ++P+ ++ LI FC M+A +
Sbjct: 44 DIITFNTLITGLCHEGHVRKAEHFLREAIRRELNPNQLSYTPLIHGFCMRGELMVASDLL 103
Query: 89 VDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVYNMLRYSKRSMCKALHEKILHILISG 148
V+M +GH P+ +LI L SEAL V + ++R + ++ I ++LISG
Sbjct: 104 VEMMGRGHTPDVVTFGALIHGLVVAGKVSEALIVRE--KMTERQVFPDVN--IYNVLISG 159
>gi|42562903|ref|NP_176512.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|114050643|gb|ABI49471.1| At1g63230 [Arabidopsis thaliana]
gi|332195952|gb|AEE34073.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 323
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/159 (22%), Positives = 69/159 (43%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+A + G E +++ GD + + NSM+ +C+ + ++ + +
Sbjct: 152 LINALVKEGKVSEAEEIYGDMLRRGIFPTTITYNSMIDGFCKQDRLNDAKRMLDSMASKS 211
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
SPD TF LI +CK K +MHR+G ++LI ++ A
Sbjct: 212 CSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQ 271
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLKDAYIVVK 159
+ N++ S + + +L L S K L+ A+ +++
Sbjct: 272 DLLNVMISSGVAPNYITFQSMLASLCSKKELRKAFAILE 310
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/123 (25%), Positives = 55/123 (44%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
MI +FCRSG + + +QL D + DVV ++++ A + G + + +
Sbjct: 117 MIDSFCRSGRWTDAEQLLRDMIERQINPDVVTFSALINALVKEGKVSEAEEIYGDMLRRG 176
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
I P T++ +I FCK+ A R + M K P+ S+LI K + +
Sbjct: 177 IFPTTITYNSMIDGFCKQDRLNDAKRMLDSMASKSCSPDVVTFSTLINGYCKAKRVDNGM 236
Query: 121 SVY 123
++
Sbjct: 237 EIF 239
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/128 (27%), Positives = 60/128 (46%), Gaps = 1/128 (0%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ C+ G E L E + K VV+ N+++ C+ G ++ ++ +
Sbjct: 47 IINGLCKMGDTESALNLLSKMEETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMHDKG 106
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
I PD T+ +I FC+ + A + + DM + P+ S+LI L K SEA
Sbjct: 107 IFPDVITYSGMIDSFCRSGRWTDAEQLLRDMIERQINPDVVTFSALINALVKEGKVSEAE 166
Query: 121 SVY-NMLR 127
+Y +MLR
Sbjct: 167 EIYGDMLR 174
Score = 45.1 bits (105), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 30/107 (28%), Positives = 47/107 (43%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C+ G + L + K DV+ + M+ ++CR+G ++R + E
Sbjct: 82 IIDRLCKDGHHIHAQNLFTEMHDKGIFPDVITYSGMIDSFCRSGRWTDAEQLLRDMIERQ 141
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLI 107
I+PD TF LI KE A DM R+G P +S+I
Sbjct: 142 INPDVVTFSALINALVKEGKVSEAEEIYGDMLRRGIFPTTITYNSMI 188
Score = 40.8 bits (94), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 18/102 (17%), Positives = 52/102 (50%), Gaps = 1/102 (0%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ +C++ + ++ + + + V +++ +C+ GD+++ ++ +
Sbjct: 222 LINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNVMISSG 281
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHR-KGHQPEEE 101
++P+Y TF ++ C +K A+ + D+ + +GH E+E
Sbjct: 282 VAPNYITFQSMLASLCSKKELRKAFAILEDLQKSEGHHLEDE 323
>gi|297807667|ref|XP_002871717.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297317554|gb|EFH47976.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 533
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/124 (24%), Positives = 57/124 (45%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ A C+ E ++ + A ++V ++L Y GDMES V+ ++ +
Sbjct: 195 LVKALCKKNDIESAYKVLDEIPAMGLVPNLVTYTTILGGYVARGDMESAKRVLEEMLDRG 254
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
PD T+ +L+ +CK + A M DM + +P E +I L K + EA
Sbjct: 255 WYPDAITYTVLMDGYCKLGRFSEAATVMDDMEKNEIEPNEVTYGVMIRALCKEKKSGEAR 314
Query: 121 SVYN 124
++++
Sbjct: 315 NMFD 318
Score = 41.2 bits (95), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 30/145 (20%), Positives = 60/145 (41%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ + G E K++ + + D + ++ YC+ G VM +++
Sbjct: 230 ILGGYVARGDMESAKRVLEEMLDRGWYPDAITYTVLMDGYCKLGRFSEAATVMDDMEKNE 289
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
I P+ T+ ++I+ CKEK A +M + P+ LC +I L + EA
Sbjct: 290 IEPNEVTYGVMIRALCKEKKSGEARNMFDEMLDRSFMPDSSLCCKVIDALCEDHKVDEAC 349
Query: 121 SVYNMLRYSKRSMCKALHEKILHIL 145
++ + + AL ++H L
Sbjct: 350 GLWRKMLKNNCMPDNALLSTLIHWL 374
>gi|242056139|ref|XP_002457215.1| hypothetical protein SORBIDRAFT_03g003430 [Sorghum bicolor]
gi|241929190|gb|EES02335.1| hypothetical protein SORBIDRAFT_03g003430 [Sorghum bicolor]
Length = 573
Score = 48.1 bits (113), Expect = 0.001, Method: Composition-based stats.
Identities = 27/98 (27%), Positives = 49/98 (50%), Gaps = 3/98 (3%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYC---RTGDMESVMHVMRKLD 57
+IS C++G + +A D VV N+++ Y R G M V ++++++
Sbjct: 194 VISGLCKTGQLRKAGDVAKDMRGWGLMPSVVTYNTLIDGYYKWGRAGKMYHVDMLLKEMN 253
Query: 58 ELAISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKG 95
+ ISP+ TF++LI +CKE A + +M + G
Sbjct: 254 QAGISPNVVTFNVLINGYCKESNITAAIKVFEEMRQHG 291
Score = 41.2 bits (95), Expect = 0.15, Method: Composition-based stats.
Identities = 26/124 (20%), Positives = 56/124 (45%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ F S + L + + K D+V N ++ A C G++ + ++ ++ E+
Sbjct: 406 LITGFTTSTDWRSVSGLLDEMKETGVKADLVTYNVLIGALCCKGEVRKAVKLLDEMVEVG 465
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ P + T++ +I FC++ A+ + M + + C+ + + KM EA
Sbjct: 466 LEPKHRTYNAIINGFCEKGDAKGAHDIRIRMEKCKKRANVVTCNVFLKYFCKMGKMDEAN 525
Query: 121 SVYN 124
V N
Sbjct: 526 VVLN 529
Score = 40.0 bits (92), Expect = 0.33, Method: Composition-based stats.
Identities = 28/122 (22%), Positives = 59/122 (48%), Gaps = 4/122 (3%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ +C+ ++ + ++V S++ CR G +E M ++ +++EL
Sbjct: 267 LINGYCKESNITAAIKVFEEMRQHGIPANMVTYTSLVSGLCREGKVEDSMKLVEEMEELG 326
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLI---FHLGKMRAHS 117
++ T + ++ FCK+ M + A + M +KG +P ++LI LGKM+ +
Sbjct: 327 LA-TLPTLNSVLNGFCKKGMMVEAEGWVDGMAQKGMKPNVVTYNTLIDGYQRLGKMKEAT 385
Query: 118 EA 119
A
Sbjct: 386 AA 387
>gi|15237345|ref|NP_197146.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75170213|sp|Q9FFE3.1|PP388_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g16420, mitochondrial; Flags: Precursor
gi|9759124|dbj|BAB09609.1| salt-inducible protein-like [Arabidopsis thaliana]
gi|332004907|gb|AED92290.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 535
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/124 (23%), Positives = 57/124 (45%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ A C+ E ++ + + ++V ++L Y GDMES V+ ++ +
Sbjct: 197 LVKALCKKNDIESAYKVLDEIPSMGLVPNLVTYTTILGGYVARGDMESAKRVLEEMLDRG 256
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
PD T+ +L+ +CK + A M DM + +P E +I L K + EA
Sbjct: 257 WYPDATTYTVLMDGYCKLGRFSEAATVMDDMEKNEIEPNEVTYGVMIRALCKEKKSGEAR 316
Query: 121 SVYN 124
++++
Sbjct: 317 NMFD 320
Score = 40.4 bits (93), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 30/145 (20%), Positives = 59/145 (40%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ + G E K++ + + D ++ YC+ G VM +++
Sbjct: 232 ILGGYVARGDMESAKRVLEEMLDRGWYPDATTYTVLMDGYCKLGRFSEAATVMDDMEKNE 291
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
I P+ T+ ++I+ CKEK A +M + P+ LC +I L + EA
Sbjct: 292 IEPNEVTYGVMIRALCKEKKSGEARNMFDEMLERSFMPDSSLCCKVIDALCEDHKVDEAC 351
Query: 121 SVYNMLRYSKRSMCKALHEKILHIL 145
++ + + AL ++H L
Sbjct: 352 GLWRKMLKNNCMPDNALLSTLIHWL 376
>gi|357128605|ref|XP_003565962.1| PREDICTED: pentatricopeptide repeat-containing protein At1g07740,
mitochondrial-like [Brachypodium distachyon]
Length = 431
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/148 (22%), Positives = 72/148 (48%), Gaps = 9/148 (6%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ C +G ++ K++ D E + + + V ++ AY R G+++ V ++ + +
Sbjct: 235 LMRGLCDAGRHDDAKKMMFDMEYQGCQTEAVNYGVLMSAYARQGNIDGVRGLLSNMRKRK 294
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMH-RKGHQPE--------EELCSSLIFHLG 111
+ PD ++++LIK C + A++ +V+M ++G P + CS+ F LG
Sbjct: 295 LKPDDASYNVLIKCLCDNGRVVEAHKALVEMQVKEGTVPSAATYRVLADGCCSAQDFGLG 354
Query: 112 KMRAHSEALSVYNMLRYSKRSMCKALHE 139
++ S + L ++ R + K L E
Sbjct: 355 LRVLNAMLASGHCPLAHTFRHLVKGLSE 382
>gi|225436658|ref|XP_002276327.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g28010-like [Vitis vinifera]
Length = 728
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 50/99 (50%)
Query: 29 DVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYMLAYRTM 88
+V ++N +L CR G + M ++R++ ++SPD +++ LI CK K A +
Sbjct: 143 NVFIMNIVLKGLCRNGGVFEAMGLIREMGRKSVSPDIVSYNTLINGLCKAKKLKEAVGLL 202
Query: 89 VDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVYNMLR 127
++M G P C++L+ L K EA+ + ++
Sbjct: 203 LEMEAAGCFPNSVTCTTLMDGLCKDGRMDEAMELLEAMK 241
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 44/100 (44%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+IS FC +G + K+L + K +VV + ++ CR G + V+ + E
Sbjct: 255 LISGFCNNGNLDRGKELFDEMLGKGISANVVTYSCLVHGLCRLGQWKEANTVLNAMAEHG 314
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEE 100
I PD T+ LI CK+ A + M KG +P
Sbjct: 315 IHPDVVTYTGLIDGLCKDGRATHAMDLLNLMVEKGEEPSN 354
Score = 44.7 bits (104), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 29/126 (23%), Positives = 55/126 (43%), Gaps = 3/126 (2%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++++ C+ G E+ K L + + D++ N+M+ + GD + V + K+ E+
Sbjct: 537 LMASLCKEGSLEQAKSLFQEMGNANCEPDIISFNTMIDGTLKAGDFQFVKELQMKMVEMG 596
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ PD TF LI K A + M G P+ + SL L + + +
Sbjct: 597 LRPDALTFSTLINRLSKLGELDEAKSALERMVASGFTPDALVYDSL---LKGLSSKGDTT 653
Query: 121 SVYNML 126
+ N+L
Sbjct: 654 EIINLL 659
Score = 42.7 bits (99), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 31/159 (19%), Positives = 67/159 (42%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ C+ G +E +L + K DVVL +++ +C G+++ + ++
Sbjct: 220 LMDGLCKDGRMDEAMELLEAMKKKGFDADVVLYGTLISGFCNNGNLDRGKELFDEMLGKG 279
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
IS + T+ L+ C+ + A + M G P+ + LI L K + A+
Sbjct: 280 ISANVVTYSCLVHGLCRLGQWKEANTVLNAMAEHGIHPDVVTYTGLIDGLCKDGRATHAM 339
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLKDAYIVVK 159
+ N++ + +L L L+ DA+ +++
Sbjct: 340 DLLNLMVEKGEEPSNVTYNVLLSGLCKEGLVIDAFKILR 378
Score = 41.6 bits (96), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 27/124 (21%), Positives = 54/124 (43%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ CR G ++E + DVV ++ C+ G M ++ + E
Sbjct: 290 LVHGLCRLGQWKEANTVLNAMAEHGIHPDVVTYTGLIDGLCKDGRATHAMDLLNLMVEKG 349
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
P T+++L+ CKE + + A++ + M KG + + ++L+ L EAL
Sbjct: 350 EEPSNVTYNVLLSGLCKEGLVIDAFKILRMMIEKGKKADVVTYNTLMKGLCDKGKVDEAL 409
Query: 121 SVYN 124
++N
Sbjct: 410 KLFN 413
Score = 40.8 bits (94), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 23/98 (23%), Positives = 44/98 (44%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C+ G + ++ K ++V N +L + G ++ M + +++ +L
Sbjct: 432 LIGGLCKEGRLTKAVKIHRKMVKKGSCGNLVTYNMLLGGCLKAGKIKEAMELWKQVLDLG 491
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQP 98
P+ T+ ILI FCK +M +A +M G P
Sbjct: 492 FVPNSFTYSILIDGFCKMRMLNIAKGLFCEMRTHGLNP 529
Score = 38.5 bits (88), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 24/97 (24%), Positives = 45/97 (46%), Gaps = 2/97 (2%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKL--DE 58
++S C+ G + ++ K K DVV N+++ C G ++ + + + +E
Sbjct: 360 LLSGLCKEGLVIDAFKILRMMIEKGKKADVVTYNTLMKGLCDKGKVDEALKLFNSMFDNE 419
Query: 59 LAISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKG 95
+ P+ TF++LI CKE A + M +KG
Sbjct: 420 NCLEPNVFTFNMLIGGLCKEGRLTKAVKIHRKMVKKG 456
>gi|255548724|ref|XP_002515418.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223545362|gb|EEF46867.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 1113
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/124 (25%), Positives = 57/124 (45%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I A C +G ++ +L +A K D V +ML + GD+ V +++
Sbjct: 305 LIDALCTAGKLDDAMELFVKMKASSHKPDRVTYITMLDKFSDCGDLGRVKEFWSEMEADG 364
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+PD TF IL+ CK A+ + M ++G P ++LI L ++ +AL
Sbjct: 365 YAPDVITFTILVNALCKAGNIDEAFHLLDVMRKQGVLPNLHTYNTLISGLLRVNRLDDAL 424
Query: 121 SVYN 124
++N
Sbjct: 425 DLFN 428
Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 24/127 (18%), Positives = 56/127 (44%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+++A C++G +E L + ++ N+++ R ++ + + ++ L
Sbjct: 375 LVNALCKAGNIDEAFHLLDVMRKQGVLPNLHTYNTLISGLLRVNRLDDALDLFNNMETLG 434
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ P T+ + I ++ K A T M +G P C++ ++ L +M EA
Sbjct: 435 VVPTAYTYILFIDFYGKSGRSDKALETFEKMKIRGIAPNIVACNASLYSLAEMGRLREAK 494
Query: 121 SVYNMLR 127
++N L+
Sbjct: 495 VIFNRLK 501
Score = 38.1 bits (87), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 35/166 (21%), Positives = 68/166 (40%), Gaps = 41/166 (24%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYD---KYDVVLLNSMLCAYCRTGDMESVMHVMRKLD 57
++ +SG EE K+L FE D + + + N ++ + +TGD+ + + +++
Sbjct: 901 LLDGLLKSGRLEEAKEL---FEEMVDYGCRPNNAIYNILINGFGKTGDVNTACELFKRMV 957
Query: 58 ELAISPDYNTFHILIKYFC----------------KEKMYM--LAYRTMVDMHRKGHQPE 99
I PD ++ L+ C + +Y+ +AY M+D + H+ E
Sbjct: 958 REGIRPDLKSYTSLVGCLCEAGRVDDALHYFEKLKQTGLYLDSIAYNLMIDGLGRSHRIE 1017
Query: 100 EELC-----------------SSLIFHLGKMRAHSEALSVYNMLRY 128
E L +SLI +LG +A +Y L++
Sbjct: 1018 EALTLYDEMQSRGINPDLFTYNSLILNLGVAGMVEQAGKLYEELQF 1063
Score = 38.1 bits (87), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 20/99 (20%), Positives = 44/99 (44%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
M+ + ++G +E +L D + D++++NS++ + G ++ + +L ++
Sbjct: 515 MMKCYSKAGQVDEAIELLSDMSENQCEPDIIVINSLINTLYKAGRVDEAWKMFCRLKDMK 574
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPE 99
++P T++ LI KE A M G P
Sbjct: 575 LAPTVVTYNTLIAGLGKEGQVQRAMELFASMTGNGCPPN 613
>gi|255581046|ref|XP_002531339.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223529061|gb|EEF31046.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 630
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/123 (26%), Positives = 53/123 (43%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C+S +E QL + K D NSML +CR GD++ +++ +
Sbjct: 390 LIDGLCKSRRVQEAAQLMDQMIMEGLKPDKFTYNSMLTYFCREGDIQKAADIVQTMTSNG 449
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
PD T+ LI CK +A R + + KG + +I L K + EA+
Sbjct: 450 CEPDIVTYGTLIGGLCKAGRVEVASRLLRSIQLKGMVLTPHAYNPVIQALFKRKRTKEAM 509
Query: 121 SVY 123
++
Sbjct: 510 RLF 512
Score = 43.1 bits (100), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 25/112 (22%), Positives = 53/112 (47%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I FC++ EE +++ E + + V N+++ C++ ++ +M ++
Sbjct: 355 LIDGFCKNKKIEEAEEIFDQMEIQGLSRNSVTYNTLIDGLCKSRRVQEAAQLMDQMIMEG 414
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGK 112
+ PD T++ ++ YFC+E A + M G +P+ +LI L K
Sbjct: 415 LKPDKFTYNSMLTYFCREGDIQKAADIVQTMTSNGCEPDIVTYGTLIGGLCK 466
Score = 38.9 bits (89), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 38/79 (48%)
Query: 29 DVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYMLAYRTM 88
D +L N +L ++ V +V + I PD +TF+ILIK CK A M
Sbjct: 157 DTLLYNFLLNVLVDGNKLKLVENVHSTMVSKGIKPDVSTFNILIKALCKAHQIRPAILVM 216
Query: 89 VDMHRKGHQPEEELCSSLI 107
+M G P+E+ ++L+
Sbjct: 217 EEMSSYGLVPDEKTFTTLM 235
Score = 38.9 bits (89), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 22/101 (21%), Positives = 49/101 (48%), Gaps = 4/101 (3%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMR--KLDE 58
M++ FCR G ++ + + + D+V +++ C+ G +E ++R +L
Sbjct: 425 MLTYFCREGDIQKAADIVQTMTSNGCEPDIVTYGTLIGGLCKAGRVEVASRLLRSIQLKG 484
Query: 59 LAISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPE 99
+ ++P + ++ +I+ K K A R +M KG+ P+
Sbjct: 485 MVLTP--HAYNPVIQALFKRKRTKEAMRLFREMEEKGNTPD 523
Score = 37.7 bits (86), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 21/100 (21%), Positives = 47/100 (47%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I + C G +E L + E +V+ N+++ +C+ +E + +++
Sbjct: 320 LIDSLCYRGKLQEALGLLREMEISGCARNVITYNTLIDGFCKNKKIEEAEEIFDQMEIQG 379
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEE 100
+S + T++ LI CK + A + M M +G +P++
Sbjct: 380 LSRNSVTYNTLIDGLCKSRRVQEAAQLMDQMIMEGLKPDK 419
>gi|147797621|emb|CAN62945.1| hypothetical protein VITISV_002230 [Vitis vinifera]
Length = 912
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 70/152 (46%), Gaps = 5/152 (3%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I +C+ G E K + F+ K ++V N+M+ +C+ G MES M ++ ++ E
Sbjct: 259 IIRGYCKMGMIENAKNV---FDEMGCKPNLVTYNTMINGFCKKGLMESAMKIVDQMTETE 315
Query: 61 -ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEA 119
PD T+ LI +CK A + M +M + +P +++I+ L EA
Sbjct: 316 DCMPDTVTYTTLIDGYCKRGELEEAMKYMEEMVSRNCEPNVLTYNAIIYGLCLNGNVDEA 375
Query: 120 LSVYNMLRYSKRSMCKALHEKILHIL-ISGKL 150
+ +R + A H IL L + GKL
Sbjct: 376 KRMMTRMRLNGLKDNVATHTSILKGLCVVGKL 407
Score = 37.4 bits (85), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 22/108 (20%), Positives = 51/108 (47%), Gaps = 1/108 (0%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+++ +C+ G ++ L + +++ V N++ +G + ++R++ +L
Sbjct: 432 VVNEYCKIGKADDAISLLKEMKSRGINPSVSSFNAVFRILVESGKTDKAGLILRQMKQLG 491
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMV-DMHRKGHQPEEELCSSLI 107
+P++ ++ +I CK K M V DM R GH + + S L+
Sbjct: 492 CTPNFLSYSTVIDGLCKAKGRMHEVEEFVDDMCRNGHHLDASMYSWLV 539
>gi|414885390|tpg|DAA61404.1| TPA: hypothetical protein ZEAMMB73_280584 [Zea mays]
Length = 645
Score = 48.1 bits (113), Expect = 0.001, Method: Composition-based stats.
Identities = 31/123 (25%), Positives = 59/123 (47%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
MI A C GC + ++L + + + N ++ +C+ D+ S + + ++L +
Sbjct: 227 MICALCEEGCIGDAERLFDAMKEAGMQPNQYTYNVLMSGHCQRDDVNSAVVLYQELLKSG 286
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
++P+ F LI FCK K + A ++M R G P + +SL+ + EAL
Sbjct: 287 LNPNAVIFTTLIDGFCKAKRFSEAKGMFLEMPRFGVAPTVPVYNSLMDGAFRSGNAQEAL 346
Query: 121 SVY 123
++Y
Sbjct: 347 ALY 349
Score = 37.4 bits (85), Expect = 2.1, Method: Composition-based stats.
Identities = 19/74 (25%), Positives = 36/74 (48%)
Query: 34 NSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHR 93
N+++ YCR G++E + ++ E+ I P+ ++ LI K +A +M
Sbjct: 400 NALIDEYCRIGNLEEALATCTRMTEVGIEPNVVSYSSLIDGHSKRGKMQIAMAIYTEMVA 459
Query: 94 KGHQPEEELCSSLI 107
KG +P ++LI
Sbjct: 460 KGIEPNVVTYTALI 473
Score = 37.0 bits (84), Expect = 2.8, Method: Composition-based stats.
Identities = 25/119 (21%), Positives = 52/119 (43%), Gaps = 1/119 (0%)
Query: 6 CR-SGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPD 64
CR G + +++ A+ +VV +M+CA C G + + + E + P+
Sbjct: 196 CRFQGTVAKAQEVWDQMVAQQIDPNVVTYTTMICALCEEGCIGDAERLFDAMKEAGMQPN 255
Query: 65 YNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVY 123
T+++L+ C+ A ++ + G P + ++LI K + SEA ++
Sbjct: 256 QYTYNVLMSGHCQRDDVNSAVVLYQELLKSGLNPNAVIFTTLIDGFCKAKRFSEAKGMF 314
>gi|356561705|ref|XP_003549120.1| PREDICTED: pentatricopeptide repeat-containing protein At1g12775,
mitochondrial-like [Glycine max]
Length = 445
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/127 (24%), Positives = 59/127 (46%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C G ++T A+ + D V +++ C+ G+ ++V ++RKL+ +
Sbjct: 134 LIKGLCFRGEIKKTLYFHDQVVAQGFQLDQVSYGTLINGLCKAGETKAVARLLRKLEGHS 193
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ PD ++ +I CK K+ A +M KG P+ ++LI M EA
Sbjct: 194 VKPDVVMYNTIINSLCKNKLLGDACDVYSEMIVKGISPDVVTYTTLIHGFCIMGKMKEAF 253
Query: 121 SVYNMLR 127
S+ N ++
Sbjct: 254 SLLNEMK 260
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 34/131 (25%), Positives = 61/131 (46%), Gaps = 3/131 (2%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ C++G + +L E K DVV+ N+++ + C+ + V ++
Sbjct: 169 LINGLCKAGETKAVARLLRKLEGHSVKPDVVMYNTIINSLCKNKLLGDACDVYSEMIVKG 228
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHL---GKMRAHS 117
ISPD T+ LI FC A+ + +M K P+ S LI L GK +
Sbjct: 229 ISPDVVTYTTLIHGFCIMGKMKEAFSLLNEMKLKNINPDVYTFSVLIDALGKEGKKKMVD 288
Query: 118 EALSVYNMLRY 128
EA+S++ +++
Sbjct: 289 EAMSLFEEMKH 299
Score = 42.0 bits (97), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 19/76 (25%), Positives = 39/76 (51%)
Query: 32 LLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYMLAYRTMVDM 91
L N++L + + +V+ + ++ + I+PD T ILI FC + LA+ ++
Sbjct: 60 LFNNILSSLVKNKRYPTVISLFKQFEPNGITPDLCTLSILINCFCHQAHITLAFSVFANI 119
Query: 92 HRKGHQPEEELCSSLI 107
++G P+ ++LI
Sbjct: 120 LKRGFHPDAITLNTLI 135
>gi|302785283|ref|XP_002974413.1| hypothetical protein SELMODRAFT_174049 [Selaginella moellendorffii]
gi|300158011|gb|EFJ24635.1| hypothetical protein SELMODRAFT_174049 [Selaginella moellendorffii]
Length = 447
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/158 (22%), Positives = 73/158 (46%), Gaps = 7/158 (4%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ FC++G F++ +L + ++ + +VV+ +++ C G + + R++ E
Sbjct: 36 LMQGFCKAGEFQQALELLDEMKSNGVRPNVVIHTTIIRGLCTAGKVSQALLHFRRIGE-D 94
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+P+ T+ IL+ CK AY + +M +KG P ++LI K+ E L
Sbjct: 95 CAPNVYTYSILVDALCKSGQPHEAYGLVTEMVKKGCSPNVVTYNALIDGFRKLERLDEVL 154
Query: 121 SVYNMLRYSKRSMCKA---LHEKILHILISGKLLKDAY 155
+L+ + C+A + IL I + +AY
Sbjct: 155 M---LLKEMSQRGCRADVITYTMILDIFCKNNSIDEAY 189
Score = 38.9 bits (89), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 25/126 (19%), Positives = 55/126 (43%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ AF +G ++ +L G D +N ++ +C+ GD+ + + + +
Sbjct: 278 LVVAFASAGRTYDSLELLGRMLGSGYILDTKTMNVVIHKFCKAGDLHEAHQLFKSMCQRG 337
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
P T++ LI FCK + A + + M + +P +S+I + + EA
Sbjct: 338 SIPSNVTYNTLIGAFCKAQQPDTAVKLLHQMIQADFKPNVITYNSIIKSFCREQREEEAR 397
Query: 121 SVYNML 126
++ M+
Sbjct: 398 GIFQMM 403
Score = 37.7 bits (86), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 32/158 (20%), Positives = 70/158 (44%), Gaps = 2/158 (1%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ A C+SG E L + K +VV N+++ + + ++ V+ +++++ +
Sbjct: 105 LVDALCKSGQPHEAYGLVTEMVKKGCSPNVVTYNALIDGFRKLERLDEVLMLLKEMSQRG 164
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
D T+ +++ FCK AYR + + ++ L ++L G +EAL
Sbjct: 165 CRADVITYTMILDIFCKNNSIDEAYRLLNALEKRNVVTYNSLFTALSTAEGDRT--TEAL 222
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLKDAYIVV 158
S+ + + + +L +L L +AY V+
Sbjct: 223 SLLEKMIQEGTRPNQVNYRTVLLMLCKNSRLDEAYQVL 260
>gi|302774715|ref|XP_002970774.1| hypothetical protein SELMODRAFT_94312 [Selaginella moellendorffii]
gi|300161485|gb|EFJ28100.1| hypothetical protein SELMODRAFT_94312 [Selaginella moellendorffii]
Length = 497
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/164 (23%), Positives = 73/164 (44%), Gaps = 12/164 (7%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDK--YDVVLLNSMLCAYCRTGDMESVMHVMRKLDE 58
++ R+G E L F+ D+ +DV+ N ++ CR G +E+ + RK+D+
Sbjct: 51 LLDGLFRTGKLERAMAL---FQEMLDRRSHDVISFNILVTGLCRAGKIETALEFFRKMDD 107
Query: 59 LAISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSE 118
SP+ T+ +LI CK A + M +G P+ + L+ L K S+
Sbjct: 108 -RCSPNVITYSVLIDGLCKANRVSQAVELLESMKARGCSPDVITYTILVDGLCK---ESK 163
Query: 119 ALSVYNMLRYSKRSMCKA---LHEKILHILISGKLLKDAYIVVK 159
+ + +LR + C + +LH L + + DA +++
Sbjct: 164 VAAAWEVLREMLDAGCVPNLVTYNSLLHGLCRARRVSDALALMR 207
Score = 44.3 bits (103), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 35/159 (22%), Positives = 69/159 (43%), Gaps = 12/159 (7%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C+ G ++ + D K D+++ N ++ C+ ++ + ++R+
Sbjct: 224 LIDGLCKVGRVKDACAMLADMIDKGGTPDLMIYNMLINGLCKADQVDESIALLRRAVSGG 283
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
I PD T+ +I C+ A R ++ + +G P+ L S+LI L K EA
Sbjct: 284 IKPDVVTYSSVIYGLCRSNRLDEACRLLLYVKSRGCPPDVILYSTLIDGLCKAGKVDEAF 343
Query: 121 SVY----------NMLRYSK--RSMCKALHEKILHILIS 147
+Y +++ YS +CKA H+L++
Sbjct: 344 DLYEVMTGDGCDADVVTYSTLIDGLCKAGRVDEAHLLLA 382
Score = 38.1 bits (87), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 37/172 (21%), Positives = 70/172 (40%), Gaps = 22/172 (12%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C++ + +L +A+ DV+ ++ C+ + + V+R++ +
Sbjct: 119 LIDGLCKANRVSQAVELLESMKARGCSPDVITYTILVDGLCKESKVAAAWEVLREMLDAG 178
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKM------- 113
P+ T++ L+ C+ + A M DM +G P +LI L K+
Sbjct: 179 CVPNLVTYNSLLHGLCRARRVSDALALMRDMTCRGCTPNVVTYGTLIDGLCKVGRVKDAC 238
Query: 114 --------RAHSEALSVYNMLRYSKRSMCKA--LHEKI--LHILISGKLLKD 153
+ + L +YNML +CKA + E I L +SG + D
Sbjct: 239 AMLADMIDKGGTPDLMIYNML---INGLCKADQVDESIALLRRAVSGGIKPD 287
Score = 37.7 bits (86), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 36/148 (24%), Positives = 62/148 (41%), Gaps = 4/148 (2%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I CRS +E +L +++ DV+L ++++ C+ G ++ + +
Sbjct: 294 VIYGLCRSNRLDEACRLLLYVKSRGCPPDVILYSTLIDGLCKAGKVDEAFDLYEVMTGDG 353
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
D T+ LI CK A+ + M R G P +SLI L + EA+
Sbjct: 354 CDADVVTYSTLIDGLCKAGRVDEAHLLLARMVRMGTPPSTMTYNSLIKGLCDLNHLDEAI 413
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISG 148
+ + +RS C A +ILI G
Sbjct: 414 ELVEEM---ERSNC-APSAVTYNILIHG 437
>gi|297741402|emb|CBI32533.3| unnamed protein product [Vitis vinifera]
Length = 299
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/148 (26%), Positives = 68/148 (45%), Gaps = 3/148 (2%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+++AFC G E ++L + K ++D++ N+++ +CR G++E + R+++
Sbjct: 93 LMAAFCDEGRMGEVEKLWEEMRMKKMEHDIMAYNTIIGGFCRIGEIERGEELFREMELSG 152
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
I T+ LI +C+ A DM RKG + E +I L R EAL
Sbjct: 153 IQSTCVTYEHLINGYCEIGDVDSAVLLYKDMCRKGFRAEARTVDGMILLLCNNRRVHEAL 212
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISG 148
+LR + ++ A K LI G
Sbjct: 213 ---KLLRVAMGNVEFAPRGKSYETLIKG 237
Score = 35.4 bits (80), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 33/143 (23%), Positives = 54/143 (37%), Gaps = 36/143 (25%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVM---------- 50
+I FCR G E ++L + E + V ++ YC GD++S +
Sbjct: 128 IIGGFCRIGEIERGEELFREMELSGIQSTCVTYEHLINGYCEIGDVDSAVLLYKDMCRKG 187
Query: 51 ---------------------HVMRKLDELAI-----SPDYNTFHILIKYFCKEKMYMLA 84
H KL +A+ +P ++ LIK FC+E A
Sbjct: 188 FRAEARTVDGMILLLCNNRRVHEALKLLRVAMGNVEFAPRGKSYETLIKGFCEEGKMEEA 247
Query: 85 YRTMVDMHRKGHQPEEELCSSLI 107
+ +M KG +P E+ S+ I
Sbjct: 248 SKLQSEMVGKGFKPTLEIYSAFI 270
>gi|125573832|gb|EAZ15116.1| hypothetical protein OsJ_30529 [Oryza sativa Japonica Group]
Length = 906
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/156 (21%), Positives = 72/156 (46%), Gaps = 4/156 (2%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C ++ + L +++ + D+ + M+ AYC+ G++ES +H+ ++ +
Sbjct: 416 VIKCLCEQNRMDDARALITIMQSRGVRPDMSTNSIMVTAYCKIGEIESALHLFGEMAKDG 475
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
I P + +I C+ + A T+ M R+G P+E + +SLI R
Sbjct: 476 IEPSIAVYDSIIVCLCRMRRLKEAEATLRQMIREGLAPDEIIYTSLINGYSLTRQTRNVC 535
Query: 121 SVYNMLRYSKRSMCKALHE--KILHILISGKLLKDA 154
+++ + KR + H +++ L+ G ++ A
Sbjct: 536 RIFDEML--KRGLQPGPHAYGSLINGLVKGNKIRKA 569
Score = 41.2 bits (95), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 25/105 (23%), Positives = 50/105 (47%), Gaps = 11/105 (10%)
Query: 1 MISAFCRSGCFEET----KQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKL 56
+I FCR G E +++ GD + D Y +M+ G ++ + + ++
Sbjct: 193 LIRVFCREGRLEPALDVFRRMKGDEHVQLDAY---AYTTMIWGLFEHGRVDHGLQMYHEM 249
Query: 57 DELAISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEE 101
+ I PD T++++I+++CK K A +D+++ G E E
Sbjct: 250 IDRGIQPDAATYNVMIRWYCKSKWVGAA----MDIYKDGKLGEAE 290
Score = 39.3 bits (90), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 27/121 (22%), Positives = 52/121 (42%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
M++A+C+ G E L G+ + + + +S++ CR ++ +R++
Sbjct: 451 MVTAYCKIGEIESALHLFGEMAKDGIEPSIAVYDSIIVCLCRMRRLKEAEATLRQMIREG 510
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
++PD + LI + + R +M ++G QP SLI L K +AL
Sbjct: 511 LAPDEIIYTSLINGYSLTRQTRNVCRIFDEMLKRGLQPGPHAYGSLINGLVKGNKIRKAL 570
Query: 121 S 121
Sbjct: 571 G 571
Score = 38.1 bits (87), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 29/119 (24%), Positives = 50/119 (42%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
MI A C G + + L G A + V+ N ++ C M+ ++ +
Sbjct: 381 MIIAMCSEGRLDVSYYLLGKLVAYGCEPSVLTYNIVIKCLCEQNRMDDARALITIMQSRG 440
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEA 119
+ PD +T I++ +CK A +M + G +P + S+I L +MR EA
Sbjct: 441 VRPDMSTNSIMVTAYCKIGEIESALHLFGEMAKDGIEPSIAVYDSIIVCLCRMRRLKEA 499
Score = 36.2 bits (82), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 28/124 (22%), Positives = 57/124 (45%)
Query: 31 VLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYMLAYRTMVD 90
++LN M+ A C G ++ +++ KL P T++I+IK C++ A +
Sbjct: 376 IVLNLMIIAMCSEGRLDVSYYLLGKLVAYGCEPSVLTYNIVIKCLCEQNRMDDARALITI 435
Query: 91 MHRKGHQPEEELCSSLIFHLGKMRAHSEALSVYNMLRYSKRSMCKALHEKILHILISGKL 150
M +G +P+ S ++ K+ AL ++ + A+++ I+ L +
Sbjct: 436 MQSRGVRPDMSTNSIMVTAYCKIGEIESALHLFGEMAKDGIEPSIAVYDSIIVCLCRMRR 495
Query: 151 LKDA 154
LK+A
Sbjct: 496 LKEA 499
>gi|297843788|ref|XP_002889775.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297335617|gb|EFH66034.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 598
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/76 (27%), Positives = 40/76 (52%), Gaps = 3/76 (3%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I FCR G + ++ E DV+ N M+ YC+ G++ + + V LD ++
Sbjct: 143 LIRGFCRMGKTRKAAKILEVLEGSGAVPDVITYNVMISGYCKAGEINNALSV---LDRMS 199
Query: 61 ISPDYNTFHILIKYFC 76
+SPD T++ +++ C
Sbjct: 200 VSPDVVTYNTILRSLC 215
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/98 (23%), Positives = 44/98 (44%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I A CR + +L + + DVV N ++ C+ G ++ + + +
Sbjct: 245 LIEATCRDSGVGQAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSG 304
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQP 98
P+ T +I+++ C +M A + + DM RKG P
Sbjct: 305 CQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSP 342
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 38/154 (24%), Positives = 67/154 (43%), Gaps = 3/154 (1%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
MIS +C++G E + DVV N++L + C +G ++ M V+ ++ +
Sbjct: 178 MISGYCKAG---EINNALSVLDRMSVSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRD 234
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
PD T+ ILI+ C++ A + + +M +G P+ + L+ + K EA+
Sbjct: 235 CYPDVITYTILIEATCRDSGVGQAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAI 294
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLKDA 154
N + S H IL + S DA
Sbjct: 295 KFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDA 328
Score = 44.7 bits (104), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 23/99 (23%), Positives = 45/99 (45%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+++ C+ G +E + D + + +V+ N +L + C TG ++ +
Sbjct: 280 LVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKG 339
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPE 99
SP TF+ILI + C++ + A + M + G QP
Sbjct: 340 FSPSVVTFNILINFLCRKGLLGRAIDILEKMPKHGCQPN 378
Score = 43.9 bits (102), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 45/95 (47%)
Query: 29 DVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYMLAYRTM 88
D+V N+ML A C+ G +E + ++ +L SP T++ +I K A + +
Sbjct: 413 DIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLL 472
Query: 89 VDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVY 123
+M K +P+ SSL+ L + EA+ +
Sbjct: 473 DEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFF 507
Score = 41.2 bits (95), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 29/126 (23%), Positives = 56/126 (44%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I ++G + +L + AK K D + +S++ R G ++ + + + +
Sbjct: 455 VIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMG 514
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ P+ TF+ ++ CK + A +V M +G +P E + LI L EAL
Sbjct: 515 VRPNAVTFNSIMLGLCKTRQTDRAIDFLVYMINRGCKPTETSYTILIEGLAYEGMAKEAL 574
Query: 121 SVYNML 126
+ N L
Sbjct: 575 ELLNEL 580
Score = 40.4 bits (93), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 28/126 (22%), Positives = 59/126 (46%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ + C +G + + ++L D K VV N ++ CR G + + ++ K+ +
Sbjct: 315 ILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPKHG 374
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
P+ +++ L+ FCKEK A + M +G P+ ++++ L K +A+
Sbjct: 375 CQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAV 434
Query: 121 SVYNML 126
+ N L
Sbjct: 435 EILNQL 440
>gi|224080263|ref|XP_002306075.1| predicted protein [Populus trichocarpa]
gi|222849039|gb|EEE86586.1| predicted protein [Populus trichocarpa]
Length = 498
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/148 (25%), Positives = 67/148 (45%), Gaps = 3/148 (2%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ FC G E ++L + K DVV N+++ +C+ G++E + R++
Sbjct: 288 LIAVFCEGGRLSEAERLWDEMRVKGIMPDVVAYNTIIGGFCKAGEVEKAEGLFREMGLSG 347
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
I TF LI+ +C+ A DM R+ + E LI L + + EAL
Sbjct: 348 IESSCVTFEHLIEGYCRIGDVNSAILVYKDMRRRDFRLEALTMEVLIGGLCEQKRVFEAL 407
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISG 148
+ +R + R + + K +LI+G
Sbjct: 408 KI---MRSAMRDVSFHPNGKSYELLING 432
>gi|302787647|ref|XP_002975593.1| hypothetical protein SELMODRAFT_103638 [Selaginella moellendorffii]
gi|300156594|gb|EFJ23222.1| hypothetical protein SELMODRAFT_103638 [Selaginella moellendorffii]
Length = 471
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/125 (24%), Positives = 65/125 (52%), Gaps = 1/125 (0%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDM-ESVMHVMRKLDEL 59
+++AFC+ +E +L K + DVV ++++ C+TG + E++ + K+ E
Sbjct: 84 LLNAFCKETKMKEAMELFKTMAEKGFEPDVVTYSTIISGLCKTGKVTEALEMLFHKMIER 143
Query: 60 AISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEA 119
S + ++ LI CK++ AY+ + +M KG+ P+ ++++ L +M SEA
Sbjct: 144 GCSANTVAYNALINGLCKDENIERAYKLLEEMASKGYVPDNITYNTILSGLCRMGKVSEA 203
Query: 120 LSVYN 124
++
Sbjct: 204 KQFFD 208
Score = 41.6 bits (96), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 30/123 (24%), Positives = 55/123 (44%), Gaps = 6/123 (4%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDK---YDVVLLNSMLCAYCRTGDMESVMHVMRKLD 57
++ +FC+ G + +L FE D D + N ++ Y + G ++ + ++
Sbjct: 14 VLKSFCKQGKLRDGYKL---FEQMLDNGISPDGIEYNILIDGYAKKGRVDEANRLYEEMV 70
Query: 58 ELAISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHS 117
+ + P T++ L+ FCKE A M KG +P+ S++I L K +
Sbjct: 71 SVGLEPSIYTYNSLLNAFCKETKMKEAMELFKTMAEKGFEPDVVTYSTIISGLCKTGKVT 130
Query: 118 EAL 120
EAL
Sbjct: 131 EAL 133
Score = 40.8 bits (94), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 33/159 (20%), Positives = 65/159 (40%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ C+ E +L + +K D + N++L CR G + +
Sbjct: 155 LINGLCKDENIERAYKLLEEMASKGYVPDNITYNTILSGLCRMGKVSEAKQFFDSMPSRG 214
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
SPD ++ L+ KE A + D+ KG+ P+ +S++ L + EA
Sbjct: 215 YSPDVVAYNGLLDALYKEGKTDEAMKLFKDVIAKGYMPDTVTYNSILLGLARKSNMDEAE 274
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLKDAYIVVK 159
++ + S + A + +L K + DA+ V++
Sbjct: 275 EMFKKMVASGCAPNGATYSIVLSGHCRAKKVDDAHKVLE 313
>gi|302806475|ref|XP_002984987.1| hypothetical protein SELMODRAFT_20977 [Selaginella moellendorffii]
gi|300147197|gb|EFJ13862.1| hypothetical protein SELMODRAFT_20977 [Selaginella moellendorffii]
Length = 471
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 69/149 (46%), Gaps = 5/149 (3%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I AFC+SG E ++ + + DVV N+++ C+ G + ++ ++ E
Sbjct: 238 IIHAFCKSGKLLEAQKTLQEMRKQRKSPDVVTYNTVIDGLCKLGKIAEAQVILDQMQESG 297
Query: 61 -ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEA 119
+ PD T+ +I CK M + A + + M + G P+ +++I L K EA
Sbjct: 298 DVLPDVVTYSTVINGLCKSDMLVEAQKLLDRMCKAGCNPDVVTYTTIIDGLCKCGRLEEA 357
Query: 120 LSVYNMLRYSKRSMCKALHEKILHILISG 148
+L+ KR+ C A + LISG
Sbjct: 358 ---EYLLQGMKRAGC-APNVVTYTTLISG 382
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/129 (20%), Positives = 62/129 (48%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C+S F E K++ + +A D ++++ C+ +E ++R++
Sbjct: 168 LIDGLCKSQKFLEAKEVLEEMKASGVTPDAFTYSALIHGLCKADKIEEAEQMLRRMAGSG 227
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+PD + +I FCK + A +T+ +M ++ P+ +++I L K+ +EA
Sbjct: 228 CTPDVVVYSSIIHAFCKSGKLLEAQKTLQEMRKQRKSPDVVTYNTVIDGLCKLGKIAEAQ 287
Query: 121 SVYNMLRYS 129
+ + ++ S
Sbjct: 288 VILDQMQES 296
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/154 (24%), Positives = 72/154 (46%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+AF R+ EE +L + + ++V N ++ A C+ + + V++K+ E
Sbjct: 63 LIAAFARAKKLEEAMKLLEEMRERGCPPNLVTYNVLVDALCKLSMVGAAQDVVKKMIEGG 122
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+P+ TF+ L+ FCK A + + M KG +P S+LI L K + EA
Sbjct: 123 FAPNVMTFNSLVDGFCKRGNVDDARKLLGIMVAKGMRPNVVTYSALIDGLCKSQKFLEAK 182
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLKDA 154
V ++ S + + ++H L +++A
Sbjct: 183 EVLEEMKASGVTPDAFTYSALIHGLCKADKIEEA 216
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 30/132 (22%), Positives = 59/132 (44%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ FC+ G ++ ++L G AK + +VV ++++ C++ V+ ++
Sbjct: 133 LVDGFCKRGNVDDARKLLGIMVAKGMRPNVVTYSALIDGLCKSQKFLEAKEVLEEMKASG 192
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
++PD T+ LI CK A + + M G P+ + SS+I K EA
Sbjct: 193 VTPDAFTYSALIHGLCKADKIEEAEQMLRRMAGSGCTPDVVVYSSIIHAFCKSGKLLEAQ 252
Query: 121 SVYNMLRYSKRS 132
+R ++S
Sbjct: 253 KTLQEMRKQRKS 264
Score = 44.7 bits (104), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 34/128 (26%), Positives = 60/128 (46%), Gaps = 7/128 (5%)
Query: 29 DVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYMLAYRTM 88
+V+ NS++ +C+ G+++ ++ + + P+ T+ LI CK + ++ A +
Sbjct: 126 NVMTFNSLVDGFCKRGNVDDARKLLGIMVAKGMRPNVVTYSALIDGLCKSQKFLEAKEVL 185
Query: 89 VDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVYNMLRYSKRSMCKA---LHEKILHIL 145
+M G P+ S+LI L K EA MLR S C ++ I+H
Sbjct: 186 EEMKASGVTPDAFTYSALIHGLCKADKIEEA---EQMLRRMAGSGCTPDVVVYSSIIHAF 242
Query: 146 I-SGKLLK 152
SGKLL+
Sbjct: 243 CKSGKLLE 250
Score = 39.3 bits (90), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 23/97 (23%), Positives = 42/97 (43%), Gaps = 7/97 (7%)
Query: 18 AGDFEAKYD-------KYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHI 70
AGD + D +VV +++ A+ R +E M ++ ++ E P+ T+++
Sbjct: 38 AGDLDGAMDHLRSMGCDPNVVTYTALIAAFARAKKLEEAMKLLEEMRERGCPPNLVTYNV 97
Query: 71 LIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLI 107
L+ CK M A + M G P +SL+
Sbjct: 98 LVDALCKLSMVGAAQDVVKKMIEGGFAPNVMTFNSLV 134
>gi|9502388|gb|AAF88095.1|AC025417_23 T12C24.15 [Arabidopsis thaliana]
Length = 735
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/107 (25%), Positives = 49/107 (45%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C+ G + L + E K K D+++ +++ +C G + ++R + +
Sbjct: 253 IIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRK 312
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLI 107
I+PD F LI F KE A +M ++G P+ +SLI
Sbjct: 313 ITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLI 359
Score = 43.9 bits (102), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 47/99 (47%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I FC +G +++ +L D + DVV ++++ + + G + + +++ +
Sbjct: 288 LIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRG 347
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPE 99
ISPD T+ LI FCKE A + M KG P
Sbjct: 348 ISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPN 386
Score = 43.5 bits (101), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 28/119 (23%), Positives = 54/119 (45%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I FC G E K+L + ++ + D+V +L C G+ E + + K+++
Sbjct: 428 LIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSK 487
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEA 119
+ D ++I+I C A+ + KG +P+ + + +I L K + SEA
Sbjct: 488 MELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEA 546
Score = 39.3 bits (90), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 28/155 (18%), Positives = 67/155 (43%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I FC+ ++ + +K ++ N ++ YC+ ++ + + RK+
Sbjct: 358 LIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRG 417
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ D T++ LI+ FC+ +A +M + +P+ L+ L +AL
Sbjct: 418 VVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKAL 477
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLKDAY 155
++ + SK + ++ I+H + + + DA+
Sbjct: 478 EIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAW 512
Score = 36.2 bits (82), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 27/120 (22%), Positives = 48/120 (40%), Gaps = 1/120 (0%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ C +G E+ ++ E + D+ + N ++ C ++ + L
Sbjct: 463 LLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKG 522
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLI-FHLGKMRAHSEA 119
+ PD T++I+I CK+ A M GH P + LI HLG+ A A
Sbjct: 523 VKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGHSPNGCTYNILIRAHLGEGDATKSA 582
>gi|414591144|tpg|DAA41715.1| TPA: hypothetical protein ZEAMMB73_506058 [Zea mays]
Length = 521
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/117 (22%), Positives = 50/117 (42%), Gaps = 19/117 (16%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I FC+ G E + L D + + + ++ N+M+ YCR G ++ + + ++++
Sbjct: 277 LIKGFCKIGQMEAAEMLLADMQGQGVGLNQIIFNTMIDGYCRKGMVDDALKIKAAMEKIG 336
Query: 61 IS-------------------PDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQP 98
+ P+Y T+ LI CK+ + A R +M KG P
Sbjct: 337 VELNIYTYNTLACGLCRMGVVPNYVTYTTLISIHCKDGDMVEARRLFREMAEKGATP 393
Score = 44.7 bits (104), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 34/67 (50%)
Query: 29 DVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYMLAYRTM 88
DV L +++ AYCR G+M V+ + + P+ T+ +LIK FCK A +
Sbjct: 235 DVYLYTAVINAYCRAGNMRRAAKVLDECVGNGVEPNERTYGVLIKGFCKIGQMEAAEMLL 294
Query: 89 VDMHRKG 95
DM +G
Sbjct: 295 ADMQGQG 301
Score = 39.7 bits (91), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 26/126 (20%), Positives = 52/126 (41%), Gaps = 19/126 (15%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCA-------------------YC 41
MI +CR G ++ ++ E + ++ N++ C +C
Sbjct: 312 MIDGYCRKGMVDDALKIKAAMEKIGVELNIYTYNTLACGLCRMGVVPNYVTYTTLISIHC 371
Query: 42 RTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEE 101
+ GDM + R++ E +P T+ ++I + K+ A R +M +KG P+
Sbjct: 372 KDGDMVEARRLFREMAEKGATPSVLTYSVMIHGYAKKGRIREAERFRKEMEKKGFVPDVY 431
Query: 102 LCSSLI 107
+SL+
Sbjct: 432 TYASLV 437
>gi|18391414|ref|NP_563911.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75167758|sp|Q9ASZ8.1|PPR37_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g12620
gi|13605505|gb|AAK32746.1|AF361578_1 At1g12620/T12C24_25 [Arabidopsis thaliana]
gi|24111307|gb|AAN46777.1| At1g12620/T12C24_25 [Arabidopsis thaliana]
gi|332190781|gb|AEE28902.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 621
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/107 (25%), Positives = 49/107 (45%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C+ G + L + E K K D+++ +++ +C G + ++R + +
Sbjct: 253 IIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRK 312
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLI 107
I+PD F LI F KE A +M ++G P+ +SLI
Sbjct: 313 ITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLI 359
Score = 43.9 bits (102), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 47/99 (47%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I FC +G +++ +L D + DVV ++++ + + G + + +++ +
Sbjct: 288 LIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRG 347
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPE 99
ISPD T+ LI FCKE A + M KG P
Sbjct: 348 ISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPN 386
Score = 43.5 bits (101), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 28/119 (23%), Positives = 54/119 (45%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I FC G E K+L + ++ + D+V +L C G+ E + + K+++
Sbjct: 428 LIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSK 487
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEA 119
+ D ++I+I C A+ + KG +P+ + + +I L K + SEA
Sbjct: 488 MELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEA 546
Score = 39.7 bits (91), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 28/155 (18%), Positives = 67/155 (43%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I FC+ ++ + +K ++ N ++ YC+ ++ + + RK+
Sbjct: 358 LIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRG 417
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ D T++ LI+ FC+ +A +M + +P+ L+ L +AL
Sbjct: 418 VVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKAL 477
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLKDAY 155
++ + SK + ++ I+H + + + DA+
Sbjct: 478 EIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAW 512
Score = 36.6 bits (83), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 27/120 (22%), Positives = 48/120 (40%), Gaps = 1/120 (0%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ C +G E+ ++ E + D+ + N ++ C ++ + L
Sbjct: 463 LLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKG 522
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLI-FHLGKMRAHSEA 119
+ PD T++I+I CK+ A M GH P + LI HLG+ A A
Sbjct: 523 VKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGHSPNGCTYNILIRAHLGEGDATKSA 582
>gi|17047023|gb|AAL34928.1|AC079037_1 Putative PPR-repeat protein [Oryza sativa]
gi|31429883|gb|AAP51872.1| hypothetical protein LOC_Os10g02650 [Oryza sativa Japonica Group]
Length = 949
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/156 (21%), Positives = 72/156 (46%), Gaps = 4/156 (2%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C ++ + L +++ + D+ + M+ AYC+ G++ES +H+ ++ +
Sbjct: 439 VIKCLCEQNRMDDARALITIMQSRGVRPDMSTNSIMVTAYCKIGEIESALHLFGEMAKDG 498
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
I P + +I C+ + A T+ M R+G P+E + +SLI R
Sbjct: 499 IEPSIAVYDSIIVCLCRMRRLKEAEATLRQMIREGLAPDEIIYTSLINGYSLTRQTRNVC 558
Query: 121 SVYNMLRYSKRSMCKALHE--KILHILISGKLLKDA 154
+++ + KR + H +++ L+ G ++ A
Sbjct: 559 RIFDEML--KRGLQPGPHAYGSLINGLVKGNKIRKA 592
Score = 42.4 bits (98), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 30/128 (23%), Positives = 58/128 (45%), Gaps = 7/128 (5%)
Query: 1 MISAFCRSGCFEET----KQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKL 56
+I FCR G E +++ GD + D Y +M+ G ++ + + ++
Sbjct: 193 LIRVFCREGRLEPALDVFRRMKGDEHVQLDAY---AYTTMIWGLFEHGRVDHGLQMYHEM 249
Query: 57 DELAISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAH 116
+ I PD T++++I+++CK K A M R G P+ + L+ L K
Sbjct: 250 IDRGIQPDAATYNVMIRWYCKSKWVGAAMDIYKVMIRTGVAPDLRCYTILMASLCKDGKL 309
Query: 117 SEALSVYN 124
EA ++++
Sbjct: 310 GEAENLFD 317
Score = 38.9 bits (89), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 27/121 (22%), Positives = 52/121 (42%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
M++A+C+ G E L G+ + + + +S++ CR ++ +R++
Sbjct: 474 MVTAYCKIGEIESALHLFGEMAKDGIEPSIAVYDSIIVCLCRMRRLKEAEATLRQMIREG 533
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
++PD + LI + + R +M ++G QP SLI L K +AL
Sbjct: 534 LAPDEIIYTSLINGYSLTRQTRNVCRIFDEMLKRGLQPGPHAYGSLINGLVKGNKIRKAL 593
Query: 121 S 121
Sbjct: 594 G 594
Score = 38.1 bits (87), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 29/119 (24%), Positives = 50/119 (42%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
MI A C G + + L G A + V+ N ++ C M+ ++ +
Sbjct: 404 MIIAMCSEGRLDVSYYLLGKLVAYGCEPSVLTYNIVIKCLCEQNRMDDARALITIMQSRG 463
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEA 119
+ PD +T I++ +CK A +M + G +P + S+I L +MR EA
Sbjct: 464 VRPDMSTNSIMVTAYCKIGEIESALHLFGEMAKDGIEPSIAVYDSIIVCLCRMRRLKEA 522
Score = 36.2 bits (82), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 28/124 (22%), Positives = 57/124 (45%)
Query: 31 VLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYMLAYRTMVD 90
++LN M+ A C G ++ +++ KL P T++I+IK C++ A +
Sbjct: 399 IVLNLMIIAMCSEGRLDVSYYLLGKLVAYGCEPSVLTYNIVIKCLCEQNRMDDARALITI 458
Query: 91 MHRKGHQPEEELCSSLIFHLGKMRAHSEALSVYNMLRYSKRSMCKALHEKILHILISGKL 150
M +G +P+ S ++ K+ AL ++ + A+++ I+ L +
Sbjct: 459 MQSRGVRPDMSTNSIMVTAYCKIGEIESALHLFGEMAKDGIEPSIAVYDSIIVCLCRMRR 518
Query: 151 LKDA 154
LK+A
Sbjct: 519 LKEA 522
>gi|356538593|ref|XP_003537787.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09820-like [Glycine max]
Length = 583
Score = 48.1 bits (113), Expect = 0.001, Method: Composition-based stats.
Identities = 30/128 (23%), Positives = 64/128 (50%), Gaps = 3/128 (2%)
Query: 2 ISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCR---TGDMESVMHVMRKLDE 58
I+ C++G + + + D +A ++V N+++ +C+ G M +++++
Sbjct: 207 INGLCKAGKLNKAEDVIEDIKAWGFSPNIVTYNTLIDGHCKKGSAGKMYRADAILKEMLA 266
Query: 59 LAISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSE 118
I P+ TF+ LI FCK++ + A +M R+G +P +SLI L E
Sbjct: 267 NKICPNEITFNTLIDGFCKDENVLAAKNAFEEMQRQGLKPNIVTYNSLINGLSNNGKLDE 326
Query: 119 ALSVYNML 126
A+++++ +
Sbjct: 327 AIALWDKM 334
Score = 45.1 bits (105), Expect = 0.009, Method: Composition-based stats.
Identities = 25/98 (25%), Positives = 51/98 (52%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I +C+ G + ++L G+ K + V N+++ YC G++++ + V ++++
Sbjct: 454 LIGGWCKDGEPSKAEKLLGEMLNVGVKPNHVTYNTLMDGYCMEGNLKAALKVRTQMEKEG 513
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQP 98
+ T+++LIK FCK A R + +M KG P
Sbjct: 514 KRANVVTYNVLIKGFCKTGKLEDANRLLNEMLEKGLNP 551
Score = 44.3 bits (103), Expect = 0.017, Method: Composition-based stats.
Identities = 21/97 (21%), Positives = 47/97 (48%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ CR+ K+L + E K DVV N ++ +C+ G+ ++ ++ +
Sbjct: 419 LIAGLCRNQNVRAAKKLLNEMENYELKADVVTYNILIGGWCKDGEPSKAEKLLGEMLNVG 478
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQ 97
+ P++ T++ L+ +C E A + M ++G +
Sbjct: 479 VKPNHVTYNTLMDGYCMEGNLKAALKVRTQMEKEGKR 515
Score = 43.1 bits (100), Expect = 0.040, Method: Composition-based stats.
Identities = 21/91 (23%), Positives = 46/91 (50%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ FC+ +E ++L D + + + N+M+ A+C+ G ME + + +
Sbjct: 349 LINGFCKKKMIKEARKLFDDIAEQDLVPNAITFNTMIDAFCKAGMMEEGFALHNSMLDEG 408
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDM 91
I P+ +T++ LI C+ + A + + +M
Sbjct: 409 IFPNVSTYNCLIAGLCRNQNVRAAKKLLNEM 439
Score = 42.7 bits (99), Expect = 0.045, Method: Composition-based stats.
Identities = 28/126 (22%), Positives = 56/126 (44%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I FC+ K + + + K ++V NS++ G ++ + + K+ L
Sbjct: 279 LIDGFCKDENVLAAKNAFEEMQRQGLKPNIVTYNSLINGLSNNGKLDEAIALWDKMVGLG 338
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ P+ TF+ LI FCK+KM A + D+ + P +++I K E
Sbjct: 339 LKPNIVTFNALINGFCKKKMIKEARKLFDDIAEQDLVPNAITFNTMIDAFCKAGMMEEGF 398
Query: 121 SVYNML 126
+++N +
Sbjct: 399 ALHNSM 404
Score = 40.8 bits (94), Expect = 0.18, Method: Composition-based stats.
Identities = 25/107 (23%), Positives = 51/107 (47%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
MI AFC++G EE L + +V N ++ CR ++ + ++ +++
Sbjct: 384 MIDAFCKAGMMEEGFALHNSMLDEGIFPNVSTYNCLIAGLCRNQNVRAAKKLLNEMENYE 443
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLI 107
+ D T++ILI +CK+ A + + +M G +P ++L+
Sbjct: 444 LKADVVTYNILIGGWCKDGEPSKAEKLLGEMLNVGVKPNHVTYNTLM 490
Score = 35.8 bits (81), Expect = 6.5, Method: Composition-based stats.
Identities = 13/71 (18%), Positives = 37/71 (52%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ +C G + ++ E + + +VV N ++ +C+TG +E ++ ++ E
Sbjct: 489 LMDGYCMEGNLKAALKVRTQMEKEGKRANVVTYNVLIKGFCKTGKLEDANRLLNEMLEKG 548
Query: 61 ISPDYNTFHIL 71
++P+ T+ ++
Sbjct: 549 LNPNRTTYDVV 559
>gi|452825793|gb|EME32788.1| mitochondrial protein translocase, MPT family [Galdieria
sulphuraria]
Length = 821
Score = 47.8 bits (112), Expect = 0.001, Method: Composition-based stats.
Identities = 34/128 (26%), Positives = 59/128 (46%), Gaps = 1/128 (0%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+ISAFCR+G E + + + DV N+++ + + ++ + ++ +L
Sbjct: 464 LISAFCRAGYVERALAIFEEMTHERIVPDVFAFNALIDGFGKLRQVDKAFEIYDRMRKLQ 523
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHR-KGHQPEEELCSSLIFHLGKMRAHSEA 119
I PD TF+ LI K K + A M DM G P+ ++LI GK ++A
Sbjct: 524 IQPDRITFNALISASGKAKNSIRALEAMGDMTEIYGLTPDRHSYNALIDACGKSGDFTKA 583
Query: 120 LSVYNMLR 127
V+ +R
Sbjct: 584 YEVFEEMR 591
Score = 38.9 bits (89), Expect = 0.70, Method: Composition-based stats.
Identities = 30/120 (25%), Positives = 53/120 (44%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I AF + E +L + + K + +S++ A+CR G +E + + ++
Sbjct: 429 LIDAFSKRMEPERALKLFQEMKEANVKPNNYCYSSLISAFCRAGYVERALAIFEEMTHER 488
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
I PD F+ LI F K + A+ M + QP+ ++LI GK + AL
Sbjct: 489 IVPDVFAFNALIDGFGKLRQVDKAFEIYDRMRKLQIQPDRITFNALISASGKAKNSIRAL 548
Score = 37.7 bits (86), Expect = 1.5, Method: Composition-based stats.
Identities = 22/99 (22%), Positives = 47/99 (47%)
Query: 29 DVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYMLAYRTM 88
DVV +++ A+ + + E + + +++ E + P+ + LI FC+ A
Sbjct: 422 DVVTYATLIDAFSKRMEPERALKLFQEMKEANVKPNNYCYSSLISAFCRAGYVERALAIF 481
Query: 89 VDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVYNMLR 127
+M + P+ ++LI GK+R +A +Y+ +R
Sbjct: 482 EEMTHERIVPDVFAFNALIDGFGKLRQVDKAFEIYDRMR 520
Score = 36.6 bits (83), Expect = 4.0, Method: Composition-based stats.
Identities = 22/88 (25%), Positives = 42/88 (47%), Gaps = 8/88 (9%)
Query: 29 DVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILI----KYFCKEKMYMLA 84
D +N+++ A R D+ + V+ K +L + PD TF+ I K EKM+ L
Sbjct: 633 DAYTMNTLISACNRRQDLSTAFEVLEKFKQLGVHPDNVTFNTFIDAVGKLDSSEKMFEL- 691
Query: 85 YRTMVDMHRKGHQPEEELCSSLIFHLGK 112
+ +M +G P + ++++ G+
Sbjct: 692 ---LSEMESRGISPSKVTLNTIVGCCGR 716
>gi|224132422|ref|XP_002328265.1| predicted protein [Populus trichocarpa]
gi|222837780|gb|EEE76145.1| predicted protein [Populus trichocarpa]
Length = 742
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/133 (25%), Positives = 60/133 (45%), Gaps = 6/133 (4%)
Query: 29 DVVLLNSMLCAYCRTGDMESVMHVMRKLDEL---AISPDYNTFHILIKYFCKEKMYMLAY 85
D++ ++++ C+ G V +K E+ + PD + + I FCKE A+
Sbjct: 432 DLISYSTIISGLCKAG---RVGEAKKKFIEMMGKNLQPDSAIYDVFIHSFCKEGKISSAF 488
Query: 86 RTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVYNMLRYSKRSMCKALHEKILHIL 145
R + DM +KG + +SLI LG E + + +R S +++ +L L
Sbjct: 489 RVLKDMEKKGCNKTLQTYNSLIMGLGSKNQIFEIYGLIDEMRERGVSPDVSIYNNVLSSL 548
Query: 146 ISGKLLKDAYIVV 158
G +KDA V+
Sbjct: 549 CEGGRVKDAPSVL 561
Score = 42.4 bits (98), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 20/92 (21%), Positives = 44/92 (47%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ +CR+G + +L G+ + V+ N+++ ++C+ G + ++ ++ +
Sbjct: 97 LVRGYCRAGFTSKGLELLGEMRRLGFSPNKVVYNTLISSFCKEGKTDDAEKLVDEMRKDG 156
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMH 92
+SPD TF+ I C + A R DM
Sbjct: 157 LSPDVVTFNARISALCSSGKVLEASRIFRDMQ 188
Score = 41.2 bits (95), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 31/49 (63%)
Query: 29 DVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCK 77
DV + N++L + C G ++ V+ ++ + ISP+ ++F ILIK FCK
Sbjct: 537 DVSIYNNVLSSLCEGGRVKDAPSVLDEMLQKGISPNISSFSILIKAFCK 585
Score = 38.9 bits (89), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 28/124 (22%), Positives = 54/124 (43%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ C++G + + L + D V ++L YC TG + +V+R++
Sbjct: 276 VMDGLCKNGVLFDARMLMRLMTSSGVLPDTVTYTTLLHGYCHTGKVSEANNVLREMMRDG 335
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
SP+ T +IL+ KE A + M+ KG+ + C+ +I L +A+
Sbjct: 336 CSPNNYTCNILLYSLWKEGRISEAEELLQKMNEKGYVIDTVTCNIVIDGLCNNGKLDKAI 395
Query: 121 SVYN 124
+ N
Sbjct: 396 EIVN 399
Score = 37.4 bits (85), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 26/125 (20%), Positives = 55/125 (44%), Gaps = 1/125 (0%)
Query: 33 LNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYMLAYRTMVDMH 92
N ++ C +G ++ + K+ E P+ +F IL++ +C+ + +M
Sbjct: 59 FNVLIGLLCDSGCLDDARELFDKMPEKGCEPNEYSFGILVRGYCRAGFTSKGLELLGEMR 118
Query: 93 RKGHQPEEELCSSLIFHLGKMRAHSEALSVYNMLRYSKRSM-CKALHEKILHILISGKLL 151
R G P + + ++LI K +A + + +R S + +I + SGK+L
Sbjct: 119 RLGFSPNKVVYNTLISSFCKEGKTDDAEKLVDEMRKDGLSPDVVTFNARISALCSSGKVL 178
Query: 152 KDAYI 156
+ + I
Sbjct: 179 EASRI 183
Score = 36.2 bits (82), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 22/86 (25%), Positives = 37/86 (43%)
Query: 34 NSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHR 93
N ++ C+ G + +MR + + PD T+ L+ +C A + +M R
Sbjct: 274 NIVMDGLCKNGVLFDARMLMRLMTSSGVLPDTVTYTTLLHGYCHTGKVSEANNVLREMMR 333
Query: 94 KGHQPEEELCSSLIFHLGKMRAHSEA 119
G P C+ L++ L K SEA
Sbjct: 334 DGCSPNNYTCNILLYSLWKEGRISEA 359
Score = 35.8 bits (81), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 23/124 (18%), Positives = 57/124 (45%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+IS C++G E K+ + K + D + + + ++C+ G + S V++ +++
Sbjct: 439 IISGLCKAGRVGEAKKKFIEMMGKNLQPDSAIYDVFIHSFCKEGKISSAFRVLKDMEKKG 498
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ T++ LI + Y + +M +G P+ + ++++ L + +A
Sbjct: 499 CNKTLQTYNSLIMGLGSKNQIFEIYGLIDEMRERGVSPDVSIYNNVLSSLCEGGRVKDAP 558
Query: 121 SVYN 124
SV +
Sbjct: 559 SVLD 562
>gi|15225722|ref|NP_180822.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75160493|sp|Q8S8P6.1|PP180_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g32630
gi|20197234|gb|AAM14987.1| putative salt-inducible protein [Arabidopsis thaliana]
gi|330253613|gb|AEC08707.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 624
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/127 (24%), Positives = 56/127 (44%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I +C+ G EE K+L + +K + + + N M+ AYC+ G ++ + ++
Sbjct: 475 LIDVYCKEGNVEEAKRLFVEMSSKGVQPNAITYNVMIYAYCKQGKIKEARKLRANMEANG 534
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ PD T+ LI C A R +M KG + +I L K EA
Sbjct: 535 MDPDSYTYTSLIHGECIADNVDEAMRLFSEMGLKGLDQNSVTYTVMISGLSKAGKSDEAF 594
Query: 121 SVYNMLR 127
+Y+ ++
Sbjct: 595 GLYDEMK 601
Score = 40.4 bits (93), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 24/105 (22%), Positives = 47/105 (44%)
Query: 3 SAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAIS 62
S F R ++E KQ K V +++ YC+ G++E + ++ +
Sbjct: 442 SCFNRLKRYDEAKQWLFRMMEGGVKLSTVSYTNLIDVYCKEGNVEEAKRLFVEMSSKGVQ 501
Query: 63 PDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLI 107
P+ T++++I +CK+ A + +M G P+ +SLI
Sbjct: 502 PNAITYNVMIYAYCKQGKIKEARKLRANMEANGMDPDSYTYTSLI 546
Score = 39.7 bits (91), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 31/128 (24%), Positives = 53/128 (41%), Gaps = 9/128 (7%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I +CR G +E + E K + DV N++ + R + + ++ E
Sbjct: 405 LIDGYCRKGMVDEASMIYDVMEQKGFQADVFTCNTIASCFNRLKRYDEAKQWLFRMMEGG 464
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIF---------HLG 111
+ ++ LI +CKE A R V+M KG QP + +I+
Sbjct: 465 VKLSTVSYTNLIDVYCKEGNVEEAKRLFVEMSSKGVQPNAITYNVMIYAYCKQGKIKEAR 524
Query: 112 KMRAHSEA 119
K+RA+ EA
Sbjct: 525 KLRANMEA 532
Score = 37.0 bits (84), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 28/120 (23%), Positives = 55/120 (45%)
Query: 7 RSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYN 66
++G + ++L + + + DV + S++ CR G+M+ + +L E +SP
Sbjct: 306 KNGKMSDAEKLFDEMRERGIESDVHVYTSLISWNCRKGNMKRAFLLFDELTEKGLSPSSY 365
Query: 67 TFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVYNML 126
T+ LI CK A M +M KG + + ++LI + EA +Y+++
Sbjct: 366 TYGALIDGVCKVGEMGAAEILMNEMQSKGVNITQVVFNTLIDGYCRKGMVDEASMIYDVM 425
>gi|357120446|ref|XP_003561938.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g16880-like [Brachypodium distachyon]
Length = 787
Score = 47.8 bits (112), Expect = 0.001, Method: Composition-based stats.
Identities = 29/114 (25%), Positives = 58/114 (50%), Gaps = 2/114 (1%)
Query: 6 CRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDY 65
CR C + +L + K K +V N ++ C+ G++E + + K+ + ++PD
Sbjct: 358 CR--CSSDALRLLEEMREKGVKATLVTHNIVIKGLCKDGELEGALGCLNKMADDGLAPDV 415
Query: 66 NTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEA 119
T++ LI CK AY M +M R+G + + ++++++L K + + EA
Sbjct: 416 ITYNTLIHAHCKAGNIAKAYTLMDEMVRRGLKLDTFTLNTVLYNLCKEKRYEEA 469
Score = 45.1 bits (105), Expect = 0.009, Method: Composition-based stats.
Identities = 26/99 (26%), Positives = 42/99 (42%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I A+C+ G E Q K DVV N+++ C G ++ + + E
Sbjct: 561 IIHAYCKEGDLENAFQFHNKMVENSFKPDVVTCNTLMNGLCLNGKLDKALKLFESWVEKG 620
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPE 99
D T++ LI+ CK+ A DM +G QP+
Sbjct: 621 KKVDVITYNTLIQTMCKDGDVDTALHFFADMEARGLQPD 659
Score = 38.1 bits (87), Expect = 1.1, Method: Composition-based stats.
Identities = 25/104 (24%), Positives = 48/104 (46%), Gaps = 8/104 (7%)
Query: 1 MISAFCRSGCFEET----KQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKL 56
+I C+ G E ++A D A DV+ N+++ A+C+ G++ +M ++
Sbjct: 386 VIKGLCKDGELEGALGCLNKMADDGLAP----DVITYNTLIHAHCKAGNIAKAYTLMDEM 441
Query: 57 DELAISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEE 100
+ D T + ++ CKEK Y A + ++G P+E
Sbjct: 442 VRRGLKLDTFTLNTVLYNLCKEKRYEEAQGLLQSPPQRGFMPDE 485
Score = 38.1 bits (87), Expect = 1.3, Method: Composition-based stats.
Identities = 30/128 (23%), Positives = 54/128 (42%), Gaps = 1/128 (0%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+++A CR G E + L + N+++ AY R G ++ V+ +
Sbjct: 245 LLNAHCRKGMLGEARALLARMKKDGVAPTRPTYNTLVSAYARLGWIKQATKVVEAMTANG 304
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGH-QPEEELCSSLIFHLGKMRAHSEA 119
PD T+++L C+ A+R +M R G P+ ++L K R S+A
Sbjct: 305 FEPDLWTYNVLAAGLCQAGKVDEAFRLKDEMERLGTLLPDVVTYNTLADACFKCRCSSDA 364
Query: 120 LSVYNMLR 127
L + +R
Sbjct: 365 LRLLEEMR 372
Score = 36.2 bits (82), Expect = 5.3, Method: Composition-based stats.
Identities = 18/74 (24%), Positives = 38/74 (51%)
Query: 34 NSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHR 93
N+++ R G ++ + + +L E + PD T++I+I +CKE A++ M
Sbjct: 524 NTLIKGLSRMGRLKEAIDKLNELMEKGLVPDDTTYNIIIHAYCKEGDLENAFQFHNKMVE 583
Query: 94 KGHQPEEELCSSLI 107
+P+ C++L+
Sbjct: 584 NSFKPDVVTCNTLM 597
Score = 35.8 bits (81), Expect = 6.8, Method: Composition-based stats.
Identities = 29/126 (23%), Positives = 52/126 (41%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I A C++G + L + + K D LN++L C+ E +++ +
Sbjct: 421 LIHAHCKAGNIAKAYTLMDEMVRRGLKLDTFTLNTVLYNLCKEKRYEEAQGLLQSPPQRG 480
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
PD ++ ++ + KE A R +M K P ++LI L +M EA+
Sbjct: 481 FMPDEVSYGTVMAAYFKEYNSEPALRLWDEMIEKKLTPSISTYNTLIKGLSRMGRLKEAI 540
Query: 121 SVYNML 126
N L
Sbjct: 541 DKLNEL 546
>gi|168047776|ref|XP_001776345.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162672305|gb|EDQ58844.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 503
Score = 47.8 bits (112), Expect = 0.001, Method: Composition-based stats.
Identities = 32/129 (24%), Positives = 62/129 (48%), Gaps = 3/129 (2%)
Query: 2 ISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAI 61
I AFC +G +E + + E ++VV+ N ++ AY R G +E +M ++ E I
Sbjct: 181 IKAFCDAGRLKEALLITTEMEKLNVPFNVVIYNILIDAYGRVGQLEEAEGLMTEMRERGI 240
Query: 62 SPDYNTFHILIKYFCKEK---MYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSE 118
P+ T++ LI + + K +++A + +M G P+ + L+ G +
Sbjct: 241 QPNVGTYNALITGYLEAKPKRQFVVAEGLIEEMEASGLYPDVVTFTMLLGAYGHEGLTEQ 300
Query: 119 ALSVYNMLR 127
A V+N ++
Sbjct: 301 AEQVFNRMK 309
Score = 39.7 bits (91), Expect = 0.46, Method: Composition-based stats.
Identities = 24/106 (22%), Positives = 51/106 (48%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ AF + G ++E + L +F+ + K D+++ N +L +Y R G ++ ++
Sbjct: 393 ILDAFQKQGRYKEARDLIEEFKNQGHKPDLMVYNMLLNSYMRGGRHVKASDILLEMKTAG 452
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSL 106
PD T+ LI F + + A + +M +G P+ + + L
Sbjct: 453 FLPDSFTYCTLIYGFLRVRDQTKALKYHREMMNRGQLPDPKTYAKL 498
>gi|147838532|emb|CAN65388.1| hypothetical protein VITISV_038361 [Vitis vinifera]
Length = 676
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/110 (25%), Positives = 54/110 (49%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+++ C+ G E QL + D+V N+++ YC+ G M+ ++ +
Sbjct: 379 LMNGLCKEGRVREAHQLFHRMVHRGLSPDIVTYNTLIHGYCKEGKMQESRSLLHDMIWNG 438
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHL 110
ISPD T +L++ + KE ++ A +V++ R G +++ S LI L
Sbjct: 439 ISPDSFTCWVLVEGYGKEGKFLSALNLVVELQRFGVSISQDIYSYLIVAL 488
Score = 42.0 bits (97), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 28/122 (22%), Positives = 54/122 (44%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+++CR G ++ L + D+V +++ C+ G + + ++
Sbjct: 344 LINSYCRKGRLDDAFYLYKIMYRRGVVPDLVSYTALMNGLCKEGRVREAHQLFHRMVHRG 403
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+SPD T++ LI +CKE + + DM G P+ C L+ GK AL
Sbjct: 404 LSPDIVTYNTLIHGYCKEGKMQESRSLLHDMIWNGISPDSFTCWVLVEGYGKEGKFLSAL 463
Query: 121 SV 122
++
Sbjct: 464 NL 465
Score = 38.5 bits (88), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 22/104 (21%), Positives = 47/104 (45%)
Query: 4 AFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISP 63
C+ G + + E + D+V N+++ +YCR G ++ ++ + + + P
Sbjct: 312 VLCKDGDTGKVNKFLEKMEEEGFDPDIVTYNTLINSYCRKGRLDDAFYLYKIMYRRGVVP 371
Query: 64 DYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLI 107
D ++ L+ CKE A++ M +G P+ ++LI
Sbjct: 372 DLVSYTALMNGLCKEGRVREAHQLFHRMVHRGLSPDIVTYNTLI 415
Score = 38.1 bits (87), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 27/120 (22%), Positives = 52/120 (43%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I +C+ G +E++ L D D ++ Y + G S ++++ +L
Sbjct: 414 LIHGYCKEGKMQESRSLLHDMIWNGISPDSFTCWVLVEGYGKEGKFLSALNLVVELQRFG 473
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+S + + LI C+E A + M + GH+ E E+ + LI + +EAL
Sbjct: 474 VSISQDIYSYLIVALCRENRPFAAKNLLERMSQDGHKXELEIYNELIKSFCQCDCIAEAL 533
>gi|221554580|gb|ACM24117.1| PPR protein [Raphanus sativus]
Length = 688
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/107 (26%), Positives = 51/107 (47%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I + C+ G + + L + + K D+ NSM+ +C +G +++++ E
Sbjct: 261 IIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERK 320
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLI 107
ISPD T++ LI F KE + A +M +G P +S+I
Sbjct: 321 ISPDVVTYNALINAFVKEGKFFEAAELYDEMLPRGIIPNTITYNSMI 367
Score = 42.4 bits (98), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 28/107 (26%), Positives = 49/107 (45%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
MI FC SG + + +QL + + DVV N+++ A+ + G + ++
Sbjct: 296 MIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAAELYDEMLPRG 355
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLI 107
I P+ T++ +I FCK+ A M KG P+ ++LI
Sbjct: 356 IIPNTITYNSMIDGFCKQDRLDAAEDMFYLMATKGCSPDVFTFTTLI 402
Score = 37.7 bits (86), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 23/95 (24%), Positives = 43/95 (45%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+AF + G F E +L + + + + NSM+ +C+ +++ + +
Sbjct: 331 LINAFVKEGKFFEAAELYDEMLPRGIIPNTITYNSMIDGFCKQDRLDAAEDMFYLMATKG 390
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKG 95
SPD TF LI +C K + +M R+G
Sbjct: 391 CSPDVFTFTTLIDGYCGAKRIDDGMELLHEMPRRG 425
Score = 37.7 bits (86), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 25/124 (20%), Positives = 52/124 (41%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I G F E ++L + + D + +SM+ C+ ++ + + +
Sbjct: 517 LICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFVSMGSKS 576
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
SP+ TF+ LI +CK +M R+G + + +LI+ K+ + AL
Sbjct: 577 FSPNVVTFNTLINGYCKAGRVDDGLELFCEMGRRGIVADAIIYITLIYGFRKVGNINGAL 636
Query: 121 SVYN 124
++
Sbjct: 637 DIFQ 640
Score = 37.4 bits (85), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 22/100 (22%), Positives = 46/100 (46%), Gaps = 1/100 (1%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+++ CR G E L + + +++ C+ GD S ++++RK++E++
Sbjct: 190 LMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSALNLLRKMEEVS 249
Query: 61 -ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPE 99
I P+ + +I CK+ + A +M KG P+
Sbjct: 250 HIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPD 289
>gi|147810269|emb|CAN75824.1| hypothetical protein VITISV_004157 [Vitis vinifera]
Length = 1512
Score = 47.8 bits (112), Expect = 0.001, Method: Composition-based stats.
Identities = 26/107 (24%), Positives = 51/107 (47%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C+ G E +Q+ K + D++ N+++ C G +E + L +
Sbjct: 1196 LIDGLCKEGKVGEAQQILELMRHKGKEPDILTYNTLMNGLCLVGQLEDATKLFESLADRG 1255
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLI 107
I + +++ILI +CK++ A+R +M KG +P ++LI
Sbjct: 1256 IKLNVFSYNILINGYCKDQKIDEAFRFFEEMRPKGLKPSTVTYNTLI 1302
Score = 47.4 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 29/127 (22%), Positives = 56/127 (44%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ C++G EE L + K ++ + + +L CR G +E ++ +
Sbjct: 1336 LLDGLCKNGHLEEAMDLFQSIKKTEHKPNIEVFSILLDGMCRAGKLEEAWKQFDEISKNG 1395
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ PD ++ILI C + M A + + M KG P+ + +I +L K EA+
Sbjct: 1396 LEPDTIAYNILINGLCNKGMLSEAVKLLWQMEEKGCLPDSITFNVIIQNLLKENEIHEAI 1455
Query: 121 SVYNMLR 127
+ +R
Sbjct: 1456 QLLEEMR 1462
Score = 45.8 bits (107), Expect = 0.006, Method: Composition-based stats.
Identities = 28/99 (28%), Positives = 44/99 (44%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ CR G +E + + E + DV NS++ R G + V + + +
Sbjct: 1126 LMDGLCRFGRLKEALEFFKEMEGRGISADVYTYNSLIHGLSRAGLWKEVTWFLNLMVDRG 1185
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPE 99
SPD TF ILI CKE A + + M KG +P+
Sbjct: 1186 FSPDAFTFTILIDGLCKEGKVGEAQQILELMRHKGKEPD 1224
Score = 38.1 bits (87), Expect = 1.3, Method: Composition-based stats.
Identities = 28/131 (21%), Positives = 57/131 (43%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I A C+ G E + + DVV+ +S++ CR G ++ + ++++
Sbjct: 1091 IIDALCKDGMTTEALDMFSEMIGAGILPDVVVYSSLMDGLCRFGRLKEALEFFKEMEGRG 1150
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
IS D T++ LI + ++ + M +G P+ + LI L K EA
Sbjct: 1151 ISADVYTYNSLIHGLSRAGLWKEVTWFLNLMVDRGFSPDAFTFTILIDGLCKEGKVGEAQ 1210
Query: 121 SVYNMLRYSKR 131
+ ++R+ +
Sbjct: 1211 QILELMRHKGK 1221
>gi|302791627|ref|XP_002977580.1| hypothetical protein SELMODRAFT_107283 [Selaginella moellendorffii]
gi|300154950|gb|EFJ21584.1| hypothetical protein SELMODRAFT_107283 [Selaginella moellendorffii]
Length = 555
Score = 47.8 bits (112), Expect = 0.001, Method: Composition-based stats.
Identities = 34/130 (26%), Positives = 57/130 (43%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
MI + ++G E L K D+V + Y R GD ++++ + R +++
Sbjct: 101 MIDLYGKAGRTAEAMDLYQTMRKNNWKPDLVSFGVIANVYSRVGDYQAILRLFRDMEQAE 160
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
I P+ F+ LI + LA +M G +P E S LI K+ A +AL
Sbjct: 161 IKPNVVLFNTLIGTLGRAGKVTLAKGMFDEMATYGLEPSEITLSILIDMYTKVGALDKAL 220
Query: 121 SVYNMLRYSK 130
VY+ ++ K
Sbjct: 221 DVYDTIKQKK 230
>gi|18491213|gb|AAL69509.1| unknown protein [Arabidopsis thaliana]
Length = 320
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/128 (28%), Positives = 64/128 (50%), Gaps = 4/128 (3%)
Query: 6 CRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDY 65
C+SG + +L + +++ K DVV N+++ A + +E + V R++ E P+
Sbjct: 107 CKSGKPWKAVKLYKEMKSRRMKLDVVAYNTVIRAIGASQGVEFGIRVFREMRERGCEPNV 166
Query: 66 NTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVYN- 124
T + +IK C++ AYR + +M ++G QP+ L L K SE LS++
Sbjct: 167 ATHNTIIKLLCEDGRMRDAYRMLDEMPKRGCQPDSITYMCLFSRLEK---PSEILSLFGR 223
Query: 125 MLRYSKRS 132
M+R R
Sbjct: 224 MIRSGVRP 231
>gi|297734265|emb|CBI15512.3| unnamed protein product [Vitis vinifera]
Length = 660
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/110 (25%), Positives = 54/110 (49%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+++ C+ G E QL + D+V N+++ YC+ G M+ ++ +
Sbjct: 334 LMNGLCKEGRVREAHQLFHRMVHRGLSPDIVTYNTLIHGYCKEGKMQESRSLLHDMIWNG 393
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHL 110
ISPD T +L++ + KE ++ A +V++ R G +++ S LI L
Sbjct: 394 ISPDSFTCWVLVEGYGKEGKFLSALNLVVELQRFGVSISQDIYSYLIVAL 443
Score = 42.4 bits (98), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 28/120 (23%), Positives = 53/120 (44%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I +C+ G +E++ L D D ++ Y + G S ++++ +L
Sbjct: 369 LIHGYCKEGKMQESRSLLHDMIWNGISPDSFTCWVLVEGYGKEGKFLSALNLVVELQRFG 428
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+S + + LI C+E A + M + GH+PE E+ + LI + +EAL
Sbjct: 429 VSISQDIYSYLIVALCRENRPFAAKNLLERMSKDGHKPELEIYNELIKSFCQCDCIAEAL 488
Score = 41.6 bits (96), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 28/122 (22%), Positives = 54/122 (44%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+++CR G ++ L + D+V +++ C+ G + + ++
Sbjct: 299 LINSYCRKGRLDDAFYLYKIMYRRGVVPDLVSYTALMNGLCKEGRVREAHQLFHRMVHRG 358
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+SPD T++ LI +CKE + + DM G P+ C L+ GK AL
Sbjct: 359 LSPDIVTYNTLIHGYCKEGKMQESRSLLHDMIWNGISPDSFTCWVLVEGYGKEGKFLSAL 418
Query: 121 SV 122
++
Sbjct: 419 NL 420
Score = 38.5 bits (88), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 22/104 (21%), Positives = 47/104 (45%)
Query: 4 AFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISP 63
C+ G + + E + D+V N+++ +YCR G ++ ++ + + + P
Sbjct: 267 VLCKDGDTGKVNKFLEKMEEEGFDPDIVTYNTLINSYCRKGRLDDAFYLYKIMYRRGVVP 326
Query: 64 DYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLI 107
D ++ L+ CKE A++ M +G P+ ++LI
Sbjct: 327 DLVSYTALMNGLCKEGRVREAHQLFHRMVHRGLSPDIVTYNTLI 370
>gi|449530158|ref|XP_004172063.1| PREDICTED: pentatricopeptide repeat-containing protein At5g13770,
chloroplastic-like [Cucumis sativus]
Length = 608
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/107 (28%), Positives = 58/107 (54%), Gaps = 2/107 (1%)
Query: 2 ISAFCRSGCFEETKQLAGDFEAK-YDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
I+A+CR G + + + + G+ E K +DK VV +S++ Y +TG ++ M ++ K+ E
Sbjct: 407 INAYCRVGLYSKAEDIFGEMEEKGFDKC-VVAYSSLISMYGKTGRLKDAMRLLAKMKEKG 465
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLI 107
P+ ++IL++ K K + +M RK P++ +S+I
Sbjct: 466 CQPNVWIYNILMEMHGKAKNLKQVEKLWKEMKRKKIAPDKVSYTSII 512
>gi|356573455|ref|XP_003554875.1| PREDICTED: uncharacterized protein LOC100816100 [Glycine max]
Length = 1122
Score = 47.8 bits (112), Expect = 0.001, Method: Composition-based stats.
Identities = 33/133 (24%), Positives = 61/133 (45%), Gaps = 2/133 (1%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++++ C+ F + QL A + V + ++ YC+ G + ++ + +
Sbjct: 218 LLNSLCKINAFPQAYQLLALMTALGINFSVNIWTILIHNYCKFGRLRLANNLFHNMLQTG 277
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
SP+ T+ IL K F + M A+R M G P+ LC+ LI L K +A+
Sbjct: 278 CSPNVVTYTILFKAFMQSNMPTPAFRLFNIMLSSGQSPDLILCNVLIDCLSKAGRCQDAI 337
Query: 121 SVYNMLRYSKRSM 133
V+ L S+R++
Sbjct: 338 QVF--LSLSERNL 348
Score = 37.4 bits (85), Expect = 2.2, Method: Composition-based stats.
Identities = 25/99 (25%), Positives = 45/99 (45%), Gaps = 4/99 (4%)
Query: 29 DVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKM-YMLAYRT 87
D++L N ++ + G + + V L E + PD TF L+ C+ +M Y+L
Sbjct: 316 DLILCNVLIDCLSKAGRCQDAIQVFLSLSERNLKPDSYTFASLLSTICRSRMFYLLPKLV 375
Query: 88 MVDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVYNML 126
+V H + C++L+ L K S A+ Y+ +
Sbjct: 376 LVSRHIDA---DLVFCNALLSSLTKADLPSLAVGFYDHM 411
>gi|449466949|ref|XP_004151188.1| PREDICTED: pentatricopeptide repeat-containing protein At5g13770,
chloroplastic-like [Cucumis sativus]
Length = 608
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/107 (28%), Positives = 58/107 (54%), Gaps = 2/107 (1%)
Query: 2 ISAFCRSGCFEETKQLAGDFEAK-YDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
I+A+CR G + + + + G+ E K +DK VV +S++ Y +TG ++ M ++ K+ E
Sbjct: 407 INAYCRVGLYSKAEDIFGEMEEKGFDKC-VVAYSSLISMYGKTGRLKDAMRLLAKMKEKG 465
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLI 107
P+ ++IL++ K K + +M RK P++ +S+I
Sbjct: 466 CQPNVWIYNILMEMHGKAKNLKQVEKLWKEMKRKKIAPDKVSYTSII 512
>gi|356541064|ref|XP_003539003.1| PREDICTED: pentatricopeptide repeat-containing protein At5g50280,
chloroplastic-like [Glycine max]
Length = 703
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/118 (22%), Positives = 56/118 (47%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I +FC G E + + E K + ++ N+++ AYC++ +E + ++
Sbjct: 337 LIKSFCVEGLMSEALIILSELEKKGVSSNTIVYNTLMDAYCKSNRVEEAEGLFVEMKTKG 396
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSE 118
I P TF+IL+ + ++ + + M +M G +P + + +I GK + S+
Sbjct: 397 IKPTEATFNILMYAYSRKMQPEIVEKLMAEMQETGLKPNAKSYTCIISAYGKQKNMSD 454
>gi|328768990|gb|EGF79035.1| hypothetical protein BATDEDRAFT_90007 [Batrachochytrium
dendrobatidis JAM81]
Length = 761
Score = 47.8 bits (112), Expect = 0.001, Method: Composition-based stats.
Identities = 27/99 (27%), Positives = 47/99 (47%)
Query: 29 DVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYMLAYRTM 88
DVV N +L +Y R GD+ + V ++ I PD +F LI ++ A++
Sbjct: 169 DVVAYNHLLDSYSRAGDLNGAVAVFSRMQTAGIFPDLVSFSTLINACVAKRDLNGAFKLY 228
Query: 89 VDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVYNMLR 127
+M K QP + + ++LI K + + A +N +R
Sbjct: 229 HEMKSKNIQPNQIIYTTLINGCAKTKDFARAWKTFNFMR 267
>gi|326507622|dbj|BAK03204.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 435
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/148 (23%), Positives = 70/148 (47%), Gaps = 9/148 (6%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ C +G ++ K+L D E + + + V ++ AY R GD++SV ++ + +
Sbjct: 237 LMRGLCDAGRQDDAKKLMFDMEYQGCQTEAVNYGVLMSAYARQGDVDSVRGLLSDMRKRK 296
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRK-GHQPE--------EELCSSLIFHLG 111
+ PD ++++LIK C A++ +V+M K G P + C + F LG
Sbjct: 297 LGPDDASYNVLIKCLCDSGKVEEAHKALVEMQLKDGTVPSAATYRVLADGCCRAGDFGLG 356
Query: 112 KMRAHSEALSVYNMLRYSKRSMCKALHE 139
++ S + L ++ + + K L E
Sbjct: 357 LRVFNAMLASGHRPLGHTFKHLAKGLGE 384
Score = 39.7 bits (91), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 19/70 (27%), Positives = 36/70 (51%)
Query: 30 VVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYMLAYRTMV 89
VV N+++ A C+ GD+ + + ++ +SP+ T+ +L++ C A + M
Sbjct: 196 VVTFNTLVGAACQEGDVGAAEQLKEEMVRRGVSPNAVTYSLLMRGLCDAGRQDDAKKLMF 255
Query: 90 DMHRKGHQPE 99
DM +G Q E
Sbjct: 256 DMEYQGCQTE 265
>gi|224138172|ref|XP_002326536.1| predicted protein [Populus trichocarpa]
gi|222833858|gb|EEE72335.1| predicted protein [Populus trichocarpa]
Length = 697
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/109 (21%), Positives = 48/109 (44%)
Query: 2 ISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAI 61
I CR G E+ D + ++ N+++ +C+ G + + ++ ++ + I
Sbjct: 232 IHGLCRVGSIEDAWNKIQDLRSSNQPLNIYCYNALIQGFCQKGRPDEALKLLEEMKDEGI 291
Query: 62 SPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHL 110
SPD ++ IL+ FC E + +M +P C+S++ L
Sbjct: 292 SPDIYSYSILVNAFCTEGDIESGMNLIQEMEHCNKKPPLVCCTSVLMGL 340
Score = 43.1 bits (100), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 22/99 (22%), Positives = 48/99 (48%)
Query: 29 DVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYMLAYRTM 88
D +++ YCR G+++ + +K+ ++P+ T+ L+ FCK K +A +
Sbjct: 575 DEFAFTAIIDGYCRVGNVKRAWSMYKKMKRNNVTPNVKTYTCLVDGFCKLKRLDMATMLI 634
Query: 89 VDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVYNMLR 127
DM R P+ + ++LI ++ A V++ ++
Sbjct: 635 DDMKRNSVTPDVKTYTALIAGYQRIENIDRAYEVFDEMK 673
Score = 40.8 bits (94), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 21/98 (21%), Positives = 44/98 (44%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I +CR GC +E + + D++ N ++ YC G E + + ++ +
Sbjct: 406 LIREYCRKGCLKEALKNFYTMLQDGLQPDIITCNHIVDQYCSRGQFEEALIYINQMKDQN 465
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQP 98
I P+ T+ ++I + CK + A+ + M + P
Sbjct: 466 ILPNSYTYSVIINWLCKYQAVEKAWEVLPVMFKDNIFP 503
Score = 35.4 bits (80), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 21/108 (19%), Positives = 54/108 (50%)
Query: 20 DFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEK 79
+ AK K+D++ ++++ + + +++S +++ ++ + + PDY + LI+ +C++
Sbjct: 355 ELSAKGYKHDLISYSTLIHGFLKGHNVKSANNLVHEMRKNGLVPDYIIYISLIREYCRKG 414
Query: 80 MYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVYNMLR 127
A + M + G QP+ C+ ++ EAL N ++
Sbjct: 415 CLKEALKNFYTMLQDGLQPDIITCNHIVDQYCSRGQFEEALIYINQMK 462
>gi|218191262|gb|EEC73689.1| hypothetical protein OsI_08260 [Oryza sativa Indica Group]
Length = 595
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/126 (22%), Positives = 56/126 (44%)
Query: 2 ISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAI 61
+ +C++G E +L + + D + ++ YC G+M++ V ++ + I
Sbjct: 112 MDTYCKNGNMNEAVKLLNEMKCGGLTPDKIHYTCLINGYCLKGEMQNAQQVFEEMLKANI 171
Query: 62 SPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEALS 121
PD T++IL FCK + M + + M +G +P I + SEA
Sbjct: 172 EPDIVTYNILASGFCKSGLVMEVFDLLDRMADQGLEPNSLTYGIAIVGFCRGGNLSEAEV 231
Query: 122 VYNMLR 127
++N++
Sbjct: 232 LFNVVE 237
Score = 36.6 bits (83), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 16/77 (20%), Positives = 39/77 (50%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ +C G + +Q+ + + D+V N + +C++G + V ++ ++ +
Sbjct: 146 LINGYCLKGEMQNAQQVFEEMLKANIEPDIVTYNILASGFCKSGLVMEVFDLLDRMADQG 205
Query: 61 ISPDYNTFHILIKYFCK 77
+ P+ T+ I I FC+
Sbjct: 206 LEPNSLTYGIAIVGFCR 222
Score = 36.2 bits (82), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 17/80 (21%), Positives = 38/80 (47%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+IS +C++G ++ D + DV++ ++ YC+ G ++ + ++ L
Sbjct: 321 LISIYCQNGDMDKAHLWFHDMVQRGLSIDVIVYTILMNGYCKAGRLQEACQLFVQMTNLG 380
Query: 61 ISPDYNTFHILIKYFCKEKM 80
I PD + +L+ KE +
Sbjct: 381 IKPDVIAYTVLLDGHLKETL 400
>gi|225441858|ref|XP_002278530.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g79540-like [Vitis vinifera]
Length = 798
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/139 (22%), Positives = 59/139 (42%), Gaps = 13/139 (9%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDK-------------YDVVLLNSMLCAYCRTGDME 47
+I C++G EE + L E + D L +M+ C +G +
Sbjct: 452 LIDGLCKAGELEEARHLFYKMEIGKNPSLFLRLSQGADRVMDTASLQTMVERLCESGLIL 511
Query: 48 SVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLI 107
++ +L + + PD T+++LI FCK K A++ ++ KGH P+ +LI
Sbjct: 512 KAYKLLMQLADSGVVPDIMTYNVLINGFCKAKNINGAFKLFRELQLKGHSPDSVTYGTLI 571
Query: 108 FHLGKMRAHSEALSVYNML 126
++ +A V + +
Sbjct: 572 DGFHRVDREEDAFRVLDQM 590
Score = 41.2 bits (95), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 28/107 (26%), Positives = 49/107 (45%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ FC+ G +E L FE + + +S++ R + V RK+ +
Sbjct: 277 LLDGFCKLGQIDEAFALLQLFEKEGYVLGIKGYSSLIDGLFRAKRYDEVQEWCRKMFKAG 336
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLI 107
I PD + ILI+ FC+ M A + DM ++G P+ ++LI
Sbjct: 337 IEPDVVLYTILIRGFCEVGMVDYALNMLNDMTQRGLSPDTYCYNALI 383
>gi|225428364|ref|XP_002283311.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g38150-like [Vitis vinifera]
Length = 380
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/127 (24%), Positives = 56/127 (44%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
M+ C+ G +E +L G K +VV+ +++ +C+ + + + RK+
Sbjct: 215 MLDGLCKDGLVQEAMKLFGLMREKGTIPEVVIYTAVVEGFCKARQLNDAVRIFRKMQNNG 274
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
ISP+ ++ +LI+ K +A V+M GH P LI K + EA
Sbjct: 275 ISPNAFSYTVLIRGMYKGNRLDIAVDFCVEMLEAGHSPNVATLVDLIHEFCKEKGVEEAK 334
Query: 121 SVYNMLR 127
+V L+
Sbjct: 335 NVIVTLK 341
>gi|125569067|gb|EAZ10582.1| hypothetical protein OsJ_00414 [Oryza sativa Japonica Group]
Length = 1003
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/121 (26%), Positives = 54/121 (44%)
Query: 2 ISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAI 61
I A+C S + + L E++ K V N ++ C+ ++ + V + + +
Sbjct: 205 IRAYCESRNLDGARGLVVRMESEGVKASAVPYNVLMYGLCKNMRVQEAVEVKNVMVNIGV 264
Query: 62 SPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEALS 121
+ D T+ L+ FC+ + +A R DM R G P E CS +I L K EA S
Sbjct: 265 TADEVTYRTLVYGFCRMEELEMALRITHDMIRLGFVPSEANCSFMIDELRKKELVEEAFS 324
Query: 122 V 122
+
Sbjct: 325 L 325
Score = 44.7 bits (104), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 26/100 (26%), Positives = 43/100 (43%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ +C+ G + + L + + ++ CR GD+ S M + R++ E
Sbjct: 414 LINGYCKQGSLDRARGLLSGMVKEGLTPTAASYSPLIAGLCRNGDLSSCMELHREMAERG 473
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEE 100
I+ + TF LI FCK+K A R M P E
Sbjct: 474 IAWNNYTFTALINGFCKDKKMDEAARLFDKMIDSNVIPNE 513
Score = 38.9 bits (89), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 31/128 (24%), Positives = 53/128 (41%), Gaps = 10/128 (7%)
Query: 10 CFEETKQLAGDFEAKYDKYD---------VVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
CF + GD E D + +V N ++ C+ G ++ + +M K+ E
Sbjct: 728 CFLDYFATEGDMEKAKDLHSAMLQGHLASIVSFNILIKGLCKAGKIQEAIDLMSKITESG 787
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
SPD ++ +I CK A+ +M KG +P+ + I +AL
Sbjct: 788 FSPDCISYSTIIHELCKMGDINKAFELWNEMLYKGLKPDVVAYNIFIRWCNVHGESDKAL 847
Query: 121 SVY-NMLR 127
+Y NM+R
Sbjct: 848 GIYTNMIR 855
Score = 35.8 bits (81), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 21/110 (19%), Positives = 49/110 (44%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ CR+G +L + + ++ +++ +C+ M+ + K+ +
Sbjct: 449 LIAGLCRNGDLSSCMELHREMAERGIAWNNYTFTALINGFCKDKKMDEAARLFDKMIDSN 508
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHL 110
+ P+ TF+++I+ +C A++ M G +P+ SLI L
Sbjct: 509 VIPNEVTFNVMIEGYCLVGNIRKAFQLYDQMVEMGLKPDNYTYRSLISGL 558
>gi|125524465|gb|EAY72579.1| hypothetical protein OsI_00445 [Oryza sativa Indica Group]
Length = 1014
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/121 (26%), Positives = 54/121 (44%)
Query: 2 ISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAI 61
I A+C S + + L E++ K V N ++ C+ ++ + V + + +
Sbjct: 205 IRAYCESRNLDGARGLVVRMESEGVKASAVPYNVLMYGLCKNMRVQEAVEVKNVMVNIGV 264
Query: 62 SPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEALS 121
+ D T+ L+ FC+ + +A R DM R G P E CS +I L K EA S
Sbjct: 265 TADEVTYRTLVYGFCRMEELEMALRITHDMIRLGFVPSEANCSFMIDELRKKELVEEAFS 324
Query: 122 V 122
+
Sbjct: 325 L 325
Score = 45.1 bits (105), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 26/100 (26%), Positives = 43/100 (43%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ +C+ G + + L + + ++ CR GD+ S M + R++ E
Sbjct: 414 LINGYCKQGSLDRARGLLSGMVKEGLTPTAASYSPLIAGLCRNGDLSSAMELHREMAERG 473
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEE 100
I+ + TF LI FCK+K A R M P E
Sbjct: 474 IAWNNYTFTALINGFCKDKKMDEAARLFDKMIDSNVIPNE 513
Score = 41.6 bits (96), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 32/128 (25%), Positives = 54/128 (42%), Gaps = 10/128 (7%)
Query: 10 CFEETKQLAGDFEAKYDKYD---------VVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
CF + GD E D + +V N ++ C+ G ++ + +MRK+ E
Sbjct: 728 CFLDYFATEGDMEKAKDLHSAMLQGHLASIVSFNILIKGLCKAGKIQEAIDLMRKITESG 787
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
SPD ++ +I CK A+ +M KG +P+ + I +AL
Sbjct: 788 FSPDCISYSTIIHELCKMGDINKAFELWNEMLYKGLKPDVVAYNIFIRWCNVHGESDKAL 847
Query: 121 SVY-NMLR 127
+Y NM+R
Sbjct: 848 GIYTNMIR 855
Score = 36.6 bits (83), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 21/110 (19%), Positives = 49/110 (44%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ CR+G +L + + ++ +++ +C+ M+ + K+ +
Sbjct: 449 LIAGLCRNGDLSSAMELHREMAERGIAWNNYTFTALINGFCKDKKMDEAARLFDKMIDSN 508
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHL 110
+ P+ TF+++I+ +C A++ M G +P+ SLI L
Sbjct: 509 VIPNEVTFNVMIEGYCLVGNIRKAFQLYDQMVEMGLKPDNYTYRSLISGL 558
>gi|224117008|ref|XP_002317451.1| predicted protein [Populus trichocarpa]
gi|222860516|gb|EEE98063.1| predicted protein [Populus trichocarpa]
Length = 461
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/99 (24%), Positives = 48/99 (48%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C++G +L + + D + ++++ + G E + V + E
Sbjct: 227 LIKGVCKNGELSLAFRLKKEMIRNKIELDPAIYSTLISGLFKAGRKEEALGVWEDMKERG 286
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPE 99
PD T++++I FCK+K + AYR + +M KG +P+
Sbjct: 287 YKPDTVTYNVIINLFCKDKDFEAAYRLLDEMVEKGCKPD 325
Score = 40.8 bits (94), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 23/99 (23%), Positives = 48/99 (48%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+IS ++G EE + D + + K D V N ++ +C+ D E+ ++ ++ E
Sbjct: 262 LISGLFKAGRKEEALGVWEDMKERGYKPDTVTYNVIINLFCKDKDFEAAYRLLDEMVEKG 321
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPE 99
PD +++++++ +E A DM R+G P+
Sbjct: 322 CKPDVISYNVILRELFEEGKRGEANDLFEDMPRRGCAPD 360
Score = 36.6 bits (83), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 31/156 (19%), Positives = 67/156 (42%), Gaps = 1/156 (0%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDEL- 59
+I FC SG ++ ++ + + +V+ +++ +C ++ + + ++
Sbjct: 156 LIRGFCASGRLDDASKVFDEMTNRGVSPNVITFGNLIYGFCLHLRLKEAFKLKTDMVKVY 215
Query: 60 AISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEA 119
+ P+ + LIK CK LA+R +M R + + + S+LI L K EA
Sbjct: 216 RVYPNAYIYASLIKGVCKNGELSLAFRLKKEMIRNKIELDPAIYSTLISGLFKAGRKEEA 275
Query: 120 LSVYNMLRYSKRSMCKALHEKILHILISGKLLKDAY 155
L V+ ++ + I+++ K + AY
Sbjct: 276 LGVWEDMKERGYKPDTVTYNVIINLFCKDKDFEAAY 311
>gi|224123682|ref|XP_002319140.1| predicted protein [Populus trichocarpa]
gi|222857516|gb|EEE95063.1| predicted protein [Populus trichocarpa]
Length = 296
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/124 (26%), Positives = 59/124 (47%), Gaps = 2/124 (1%)
Query: 27 KYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYMLAYR 86
++DVV SM+ Y + G + V+ + +++ ++ I PD ++ +I K ++ A+
Sbjct: 7 RFDVVSYASMMSCYSKAGSLYRVLRLYKQMKKIGIEPDRKVYNAVIHALAKGRLVNEAFN 66
Query: 87 TMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVY-NMLRYSKRSMCKALHEKILHIL 145
M M KG P +SLI L + R EA + +ML+ + H L IL
Sbjct: 67 LMKTMEEKGVAPNIVTYNSLIKPLCRARKVEEAKGAFDDMLKRCISPTIRTYH-AFLRIL 125
Query: 146 ISGK 149
+G+
Sbjct: 126 RTGE 129
>gi|449460383|ref|XP_004147925.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g09060-like [Cucumis sativus]
gi|449516585|ref|XP_004165327.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g09060-like [Cucumis sativus]
Length = 701
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/149 (21%), Positives = 69/149 (46%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
M+ C+ G E+ +L + K + + NS++ Y R +E + V+R++
Sbjct: 435 MVHGLCKKGMLEQAVELIHQMKKNRRKLNSHVFNSLINGYVRAFKLEEAISVLREMKSKD 494
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+P +++ +I CK + + AY ++ +M +G +P+ S LI L + AL
Sbjct: 495 CAPTVVSYNTIINGLCKAERFSDAYLSLKEMLEEGLKPDMITYSLLIDGLCRGEKVDMAL 554
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGK 149
++++ + +H I+H L + +
Sbjct: 555 NLWHQCINKRLKPDLQMHNIIIHGLCTAQ 583
Score = 37.7 bits (86), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 28/124 (22%), Positives = 53/124 (42%), Gaps = 1/124 (0%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRK-LDEL 59
+I+A +SG + +L + + DV+ N ++ + R GD + ++ L E
Sbjct: 190 LINALAKSGNLLDAVELFDEMSVRGVNPDVMCYNILIDGFLRKGDFVKANEIWKRLLTES 249
Query: 60 AISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEA 119
++ P T++I+I CK + M + P+ SS+I L K + A
Sbjct: 250 SVYPSVETYNIMINGLCKLGKLDESMEMWNRMKKNEKSPDLFTFSSMIHGLSKAGNFNAA 309
Query: 120 LSVY 123
V+
Sbjct: 310 EKVF 313
>gi|297805650|ref|XP_002870709.1| binding protein [Arabidopsis lyrata subsp. lyrata]
gi|297316545|gb|EFH46968.1| binding protein [Arabidopsis lyrata subsp. lyrata]
Length = 608
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/164 (25%), Positives = 77/164 (46%), Gaps = 9/164 (5%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+ + FC + + E E + + D+V N+++ +YCR G ++ ++ + +
Sbjct: 240 LTNVFCNNSNYGEVDDFLEKMEEEGFEPDLVTYNTLVSSYCRRGRLKEAFYLYKIMYRRR 299
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGK--MRAHSE 118
+ PD T+ LIK CK+ A++T M +G +P+ ++LI+ K M S+
Sbjct: 300 VVPDLVTYTSLIKGLCKDGRVREAHQTFHRMVDRGIKPDCMSYNTLIYAYCKEGMMQQSK 359
Query: 119 ALSVYNMLRYS---KRSMCKALHEKILHILISGKLLKDAYIVVK 159
L ++ ML S R CK + E + G+LL VV+
Sbjct: 360 KL-LHEMLGNSVVPDRFTCKVIVEGFVR---EGRLLAAVNFVVE 399
Score = 38.5 bits (88), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 25/107 (23%), Positives = 50/107 (46%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C+ G E Q + K D + N+++ AYC+ G M+ ++ ++ +
Sbjct: 310 LIKGLCKDGRVREAHQTFHRMVDRGIKPDCMSYNTLIYAYCKEGMMQQSKKLLHEMLGNS 369
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLI 107
+ PD T ++++ F +E + A +V++ R E+C LI
Sbjct: 370 VVPDRFTCKVIVEGFVREGRLLAAVNFVVELRRLKVIIPIEVCDFLI 416
>gi|226493958|ref|NP_001147934.1| fertility restorer [Zea mays]
gi|195614680|gb|ACG29170.1| fertility restorer [Zea mays]
Length = 563
Score = 47.8 bits (112), Expect = 0.002, Method: Composition-based stats.
Identities = 30/138 (21%), Positives = 62/138 (44%), Gaps = 6/138 (4%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+++ CR+G +E + + + V ++ YCR G +E +++ ++E
Sbjct: 172 LVTGLCRAGKLDEAWGVLDWMLQEGCRPMVHTYTPIVQGYCRQGQIEEATNLIGFMEEAG 231
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
P+ T+++LI+ C + + + + ++ KGH+ + + LGK EAL
Sbjct: 232 CPPNAVTYNVLIRALCDDARFAEVEQVLAEIETKGHELSTVTYNIYMDALGKKGMAKEAL 291
Query: 121 SVYNMLRYSKRSMCKALH 138
+ L+ CK LH
Sbjct: 292 KQFEALQ------CKGLH 303
>gi|302780409|ref|XP_002971979.1| hypothetical protein SELMODRAFT_59387 [Selaginella moellendorffii]
gi|300160278|gb|EFJ26896.1| hypothetical protein SELMODRAFT_59387 [Selaginella moellendorffii]
Length = 136
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/98 (23%), Positives = 48/98 (48%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ +C +G ++ ++L + A DV S++ +C+ M V++++ +
Sbjct: 6 LVEGYCNAGLVDDAERLLEEMVASDCSPDVYTYTSLVNGFCKVKRMVEAHRVLKRMAKGG 65
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQP 98
P+ T+ LI FC+ M+AY+ + +M G QP
Sbjct: 66 CQPNVVTYTALIDAFCRAGKPMVAYKLLEEMVGNGVQP 103
>gi|15218325|ref|NP_172461.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|122215618|sp|Q3EDF8.1|PPR28_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g09900
gi|332190391|gb|AEE28512.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 598
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/76 (27%), Positives = 40/76 (52%), Gaps = 3/76 (3%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I FCR G + ++ E DV+ N M+ YC+ G++ + + V LD ++
Sbjct: 143 LIRGFCRLGKTRKAAKILEILEGSGAVPDVITYNVMISGYCKAGEINNALSV---LDRMS 199
Query: 61 ISPDYNTFHILIKYFC 76
+SPD T++ +++ C
Sbjct: 200 VSPDVVTYNTILRSLC 215
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 23/98 (23%), Positives = 43/98 (43%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I A CR +L + + DVV N ++ C+ G ++ + + +
Sbjct: 245 LIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSG 304
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQP 98
P+ T +I+++ C +M A + + DM RKG P
Sbjct: 305 CQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSP 342
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 38/154 (24%), Positives = 67/154 (43%), Gaps = 3/154 (1%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
MIS +C++G E + DVV N++L + C +G ++ M V+ ++ +
Sbjct: 178 MISGYCKAG---EINNALSVLDRMSVSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRD 234
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
PD T+ ILI+ C++ A + + +M +G P+ + L+ + K EA+
Sbjct: 235 CYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAI 294
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLKDA 154
N + S H IL + S DA
Sbjct: 295 KFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDA 328
Score = 44.3 bits (103), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 23/99 (23%), Positives = 45/99 (45%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+++ C+ G +E + D + + +V+ N +L + C TG ++ +
Sbjct: 280 LVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKG 339
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPE 99
SP TF+ILI + C++ + A + M + G QP
Sbjct: 340 FSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPN 378
Score = 43.9 bits (102), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 45/95 (47%)
Query: 29 DVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYMLAYRTM 88
D+V N+ML A C+ G +E + ++ +L SP T++ +I K A + +
Sbjct: 413 DIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLL 472
Query: 89 VDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVY 123
+M K +P+ SSL+ L + EA+ +
Sbjct: 473 DEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFF 507
Score = 42.4 bits (98), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 30/126 (23%), Positives = 56/126 (44%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I ++G + +L + AK K D + +S++ R G ++ + + + +
Sbjct: 455 VIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMG 514
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
I P+ TF+ ++ CK + A +V M +G +P E + LI L EAL
Sbjct: 515 IRPNAVTFNSIMLGLCKSRQTDRAIDFLVFMINRGCKPNETSYTILIEGLAYEGMAKEAL 574
Query: 121 SVYNML 126
+ N L
Sbjct: 575 ELLNEL 580
Score = 41.2 bits (95), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 28/126 (22%), Positives = 59/126 (46%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ + C +G + + ++L D K VV N ++ CR G + + ++ K+ +
Sbjct: 315 ILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHG 374
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
P+ +++ L+ FCKEK A + M +G P+ ++++ L K +A+
Sbjct: 375 CQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAV 434
Query: 121 SVYNML 126
+ N L
Sbjct: 435 EILNQL 440
>gi|326494062|dbj|BAJ85493.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 567
Score = 47.8 bits (112), Expect = 0.002, Method: Composition-based stats.
Identities = 26/107 (24%), Positives = 53/107 (49%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ + G E+ K L E++ + DV + ++ Y + G ++ ++R+ ++
Sbjct: 408 VITGLSKEGEMEDAKDLIRVMESRGLRPDVYTYSVIMSGYAKGGMIDEAHSLLREAKKIH 467
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLI 107
P T+HILI+ +CK + + A + +M G QP + + LI
Sbjct: 468 PKPSRVTYHILIRGYCKMEEFEKALECLKEMKEDGLQPNMDEYNKLI 514
>gi|13872949|dbj|BAB44054.1| hypothetical protein [Oryza sativa Japonica Group]
Length = 909
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/121 (26%), Positives = 54/121 (44%)
Query: 2 ISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAI 61
I A+C S + + L E++ K V N ++ C+ ++ + V + + +
Sbjct: 228 IRAYCESRNLDGARGLVVRMESEGVKASAVPYNVLMYGLCKNMRVQEAVEVKNVMVNIGV 287
Query: 62 SPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEALS 121
+ D T+ L+ FC+ + +A R DM R G P E CS +I L K EA S
Sbjct: 288 TADEVTYRTLVYGFCRMEELEMALRITHDMIRLGFVPSEANCSFMIDELRKKELVEEAFS 347
Query: 122 V 122
+
Sbjct: 348 L 348
Score = 44.7 bits (104), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 26/100 (26%), Positives = 43/100 (43%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ +C+ G + + L + + ++ CR GD+ S M + R++ E
Sbjct: 437 LINGYCKQGSLDRARGLLSGMVKEGLTPTAASYSPLIAGLCRNGDLSSCMELHREMAERG 496
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEE 100
I+ + TF LI FCK+K A R M P E
Sbjct: 497 IAWNNYTFTALINGFCKDKKMDEAARLFDKMIDSNVIPNE 536
Score = 38.9 bits (89), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 31/128 (24%), Positives = 53/128 (41%), Gaps = 10/128 (7%)
Query: 10 CFEETKQLAGDFEAKYDKYD---------VVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
CF + GD E D + +V N ++ C+ G ++ + +M K+ E
Sbjct: 751 CFLDYFATEGDMEKAKDLHSAMLQGHLASIVSFNILIKGLCKAGKIQEAIDLMSKITESG 810
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
SPD ++ +I CK A+ +M KG +P+ + I +AL
Sbjct: 811 FSPDCISYSTIIHELCKMGDINKAFELWNEMLYKGLKPDVVAYNIFIRWCNVHGESDKAL 870
Query: 121 SVY-NMLR 127
+Y NM+R
Sbjct: 871 GIYTNMIR 878
Score = 36.2 bits (82), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 23/120 (19%), Positives = 49/120 (40%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C++G +E L D + ++++ C+ GD+ + ++
Sbjct: 786 LIKGLCKAGKIQEAIDLMSKITESGFSPDCISYSTIIHELCKMGDINKAFELWNEMLYKG 845
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ PD ++I I++ A +M R G QP + +L+ + M + +AL
Sbjct: 846 LKPDVVAYNIFIRWCNVHGESDKALGIYTNMIRSGVQPNWDTYRALLSGISLMVSKGQAL 905
Score = 35.8 bits (81), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 21/110 (19%), Positives = 49/110 (44%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ CR+G +L + + ++ +++ +C+ M+ + K+ +
Sbjct: 472 LIAGLCRNGDLSSCMELHREMAERGIAWNNYTFTALINGFCKDKKMDEAARLFDKMIDSN 531
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHL 110
+ P+ TF+++I+ +C A++ M G +P+ SLI L
Sbjct: 532 VIPNEVTFNVMIEGYCLVGNIRKAFQLYDQMVEMGLKPDNYTYRSLISGL 581
>gi|297837133|ref|XP_002886448.1| hypothetical protein ARALYDRAFT_475066 [Arabidopsis lyrata subsp.
lyrata]
gi|297332289|gb|EFH62707.1| hypothetical protein ARALYDRAFT_475066 [Arabidopsis lyrata subsp.
lyrata]
Length = 332
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/99 (25%), Positives = 46/99 (46%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+++ CR G E + L + + V +++ C+ GD +S ++++RK+DE
Sbjct: 16 LMNGLCREGRVLEAEALVDRMVENGHQPNEVTYGTIVNGMCKMGDTDSALNLLRKMDESH 75
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPE 99
I D + +I CK+ + A +MH KG P
Sbjct: 76 IKADVVIYTAIIDRLCKDGHHSKAQNLFTEMHDKGIFPN 114
Score = 42.7 bits (99), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 49/108 (45%), Gaps = 2/108 (1%)
Query: 1 MISAFCRSGCFEETKQLAGD-FEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDEL 59
MI C G + + +QL D E+ D DVV N+++ A+ + G + + R++
Sbjct: 121 MIDGCCSYGKWTDAEQLLRDMIESNVDP-DVVTFNALINAFVKEGKISEAEELYREMLGR 179
Query: 60 AISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLI 107
I PD T++ LI FCK A M KG P ++LI
Sbjct: 180 NIFPDTITYNSLIDGFCKHSRLDDAKHIFDLMVSKGGSPNVITINTLI 227
Score = 40.0 bits (92), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 24/107 (22%), Positives = 50/107 (46%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+AF + G E ++L + + D + NS++ +C+ ++ H+ +
Sbjct: 156 LINAFVKEGKISEAEELYREMLGRNIFPDTITYNSLIDGFCKHSRLDDAKHIFDLMVSKG 215
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLI 107
SP+ T + LI C+ K + + +M R+G P+ ++LI
Sbjct: 216 GSPNVITINTLIGGCCRAKRVDDGIKLLHEMLRRGLVPDSVSYNTLI 262
Score = 36.2 bits (82), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 29/126 (23%), Positives = 52/126 (41%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C+ G + + L + K +V+ N M+ C G ++R + E
Sbjct: 86 IIDRLCKDGHHSKAQNLFTEMHDKGIFPNVLTYNCMIDGCCSYGKWTDAEQLLRDMIESN 145
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ PD TF+ LI F KE A +M + P+ +SLI K +A
Sbjct: 146 VDPDVVTFNALINAFVKEGKISEAEELYREMLGRNIFPDTITYNSLIDGFCKHSRLDDAK 205
Query: 121 SVYNML 126
+++++
Sbjct: 206 HIFDLM 211
>gi|297723907|ref|NP_001174317.1| Os05g0275100 [Oryza sativa Japonica Group]
gi|255676205|dbj|BAH93045.1| Os05g0275100, partial [Oryza sativa Japonica Group]
Length = 213
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 43/82 (52%)
Query: 29 DVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYMLAYRTM 88
+++ NS++ C++G + +++ KL ISP+ T++ LI +CKE A++
Sbjct: 43 NIITYNSLIYGLCKSGKLSRAVNLFNKLQSKGISPNGITYNTLIDEYCKEGKTTEAFKLK 102
Query: 89 VDMHRKGHQPEEELCSSLIFHL 110
M +G QP S LI+ L
Sbjct: 103 QKMVEEGIQPTVITYSILIYGL 124
Score = 37.4 bits (85), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 19/78 (24%), Positives = 34/78 (43%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C+SG L ++K + + N+++ YC+ G + +K+ E
Sbjct: 50 LIYGLCKSGKLSRAVNLFNKLQSKGISPNGITYNTLIDEYCKEGKTTEAFKLKQKMVEEG 109
Query: 61 ISPDYNTFHILIKYFCKE 78
I P T+ ILI C +
Sbjct: 110 IQPTVITYSILIYGLCTQ 127
>gi|356544600|ref|XP_003540737.1| PREDICTED: pentatricopeptide repeat-containing protein At1g07740,
mitochondrial-like [Glycine max]
Length = 449
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/160 (23%), Positives = 73/160 (45%), Gaps = 5/160 (3%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ C EE K+L D + K V ++ + G +E ++ ++ +
Sbjct: 251 LMEGLCSVEKTEEAKKLMFDMAYRGCKAQPVNFGVLMNDLGKRGKVEEAKSLLHEMKKRR 310
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ PD T++ILI Y CKE M AY+ +++M G P ++ L ++ AL
Sbjct: 311 LKPDVVTYNILINYLCKEGKAMEAYKVLLEMQIGGCVPNAATYRMVVDGLCQIGDFEVAL 370
Query: 121 SVYNML---RYSKRSMCKALHEKILHILISGKLLKDAYIV 157
SV N + R+ RS + + ++ +L SG + +++
Sbjct: 371 SVLNAMLTSRHCPRS--ETFNCMVVGLLKSGNIDGSCFVL 408
Score = 35.0 bits (79), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 24/93 (25%), Positives = 44/93 (47%)
Query: 30 VVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYMLAYRTMV 89
VV NS++ CR GD++ M ++ + + + T+ +L++ C + A + M
Sbjct: 210 VVTYNSLIGFLCRKGDLDKAMALLEDMGQKGKHANEVTYALLMEGLCSVEKTEEAKKLMF 269
Query: 90 DMHRKGHQPEEELCSSLIFHLGKMRAHSEALSV 122
DM +G + + L+ LGK EA S+
Sbjct: 270 DMAYRGCKAQPVNFGVLMNDLGKRGKVEEAKSL 302
>gi|357460285|ref|XP_003600424.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355489472|gb|AES70675.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 393
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/158 (21%), Positives = 69/158 (43%), Gaps = 12/158 (7%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C+S + G+ + +++ NS+L C+ ++ + ++ K+
Sbjct: 234 LIDGLCKSRRIYDVWDFIGEMHDRGQPANIITYNSLLDGLCKNHQVDKAITLLTKIKNQG 293
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
I P+ T+ IL+ CK A D+ KG+Q + + + +I L K EAL
Sbjct: 294 IRPNIYTYTILVDGLCKNGRLRDAQEVYQDLLNKGYQLDARIYTVMINGLCKEGFLDEAL 353
Query: 121 SVYNMLRYSK------------RSMCKALHEKILHILI 146
S+ + + +K R++ ++ +IL+I I
Sbjct: 354 SLLSKMEDNKCTPDGVTYEITIRALFESDRNEILYIFI 391
Score = 39.7 bits (91), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 23/114 (20%), Positives = 50/114 (43%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ C+ G ++ + + + + ++V NS++ Y ++ + +
Sbjct: 129 LVDGLCKDGEVKKARNVLAIMIKQRVEPNIVTYNSLMDGYFLVKEVNKAKQLFNTISLRG 188
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMR 114
++P+ ++ ++I CK KM A +MH K P+ +SLI L K R
Sbjct: 189 MTPNVRSYKVMINGLCKNKMVDEAANLFKEMHSKNMVPDTVAYNSLIDGLCKSR 242
>gi|357517409|ref|XP_003628993.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355523015|gb|AET03469.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 819
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/121 (24%), Positives = 58/121 (47%)
Query: 2 ISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAI 61
I+A+C+ G +E L +VV N+++ C++G +E + ++ E +
Sbjct: 248 INAYCKGGKIDEAVGLFLKMGEGGVLPNVVTYNNLIDGLCKSGRLEEALMFKGRMVENKV 307
Query: 62 SPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEALS 121
+P T+ IL+ K + + A +V+M+ KG P E + ++LI + +AL
Sbjct: 308 NPSLVTYGILVNGLVKFEKFDEANSVLVEMYSKGFSPNEFVFNALIDGYSRKGNMDDALR 367
Query: 122 V 122
V
Sbjct: 368 V 368
Score = 39.3 bits (90), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 17/79 (21%), Positives = 40/79 (50%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I +C+ G ++ + + + + + + + M+ YC+ G+ + ++ ++
Sbjct: 703 LIGGYCKLGQMDQIESILQEMTSNCIQPNKITYTIMIDGYCKMGNTKEATKLLNEMIANG 762
Query: 61 ISPDYNTFHILIKYFCKEK 79
ISPD T+ +L K +CKE
Sbjct: 763 ISPDTVTYTVLQKGYCKEN 781
Score = 38.9 bits (89), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 27/123 (21%), Positives = 55/123 (44%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I + R G ++ ++ D K K + V N++L +CRT ME V+ L
Sbjct: 352 LIDGYSRKGNMDDALRVRDDMTLKGLKPNAVTHNTLLQGFCRTNQMEQAEQVLEYLLSNV 411
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+S + + ++ CK + A + + + + + + L + L+ L K H EA+
Sbjct: 412 LSVNEDACSYVLHLLCKSSKFDSALKIVKALLLRNIKVNDSLLTLLVCGLCKCGKHLEAI 471
Query: 121 SVY 123
++
Sbjct: 472 DLW 474
Score = 38.1 bits (87), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 21/99 (21%), Positives = 46/99 (46%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C + EE K + + + +V +++ YC+ G M+ + +++++
Sbjct: 668 IIHGMCCNDLVEEAKGIFEEMRNEGLMPNVFCYTALIGGYCKLGQMDQIESILQEMTSNC 727
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPE 99
I P+ T+ I+I +CK A + + +M G P+
Sbjct: 728 IQPNKITYTIMIDGYCKMGNTKEATKLLNEMIANGISPD 766
>gi|297720523|ref|NP_001172623.1| Os01g0816000 [Oryza sativa Japonica Group]
gi|56785065|dbj|BAD82704.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|125572420|gb|EAZ13935.1| hypothetical protein OsJ_03862 [Oryza sativa Japonica Group]
gi|255673815|dbj|BAH91353.1| Os01g0816000 [Oryza sativa Japonica Group]
Length = 530
Score = 47.8 bits (112), Expect = 0.002, Method: Composition-based stats.
Identities = 30/107 (28%), Positives = 49/107 (45%)
Query: 13 ETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILI 72
E K+ E K K DVV SM+ + + G +++VM + ++ E + PD ++ ++
Sbjct: 269 EAKRFWNAMEIKGIKRDVVSYGSMISCFSKAGSLDTVMKLFNRMKEAGVIPDRKIYNAVV 328
Query: 73 KYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEA 119
K + A + M KG P+ +SLI L K R EA
Sbjct: 329 YALAKGQCVNEAKALVRSMEEKGVAPDTATFNSLIRPLCKARQVQEA 375
Score = 42.4 bits (98), Expect = 0.059, Method: Composition-based stats.
Identities = 31/134 (23%), Positives = 59/134 (44%), Gaps = 6/134 (4%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
MIS F ++G + +L + D + N+++ A + + ++R ++E
Sbjct: 292 MISCFSKAGSLDTVMKLFNRMKEAGVIPDRKIYNAVVYALAKGQCVNEAKALVRSMEEKG 351
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
++PD TF+ LI+ CK + A + + DM +G P S FH + +
Sbjct: 352 VAPDTATFNSLIRPLCKARQVQEARKMLDDMLGRGLSP-----SVRTFH-ALLDVARSPI 405
Query: 121 SVYNMLRYSKRSMC 134
V+++L K C
Sbjct: 406 EVFDLLDKMKELQC 419
>gi|357153691|ref|XP_003576535.1| PREDICTED: pentatricopeptide repeat-containing protein At4g30825,
chloroplastic-like [Brachypodium distachyon]
Length = 936
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/134 (27%), Positives = 62/134 (46%), Gaps = 10/134 (7%)
Query: 1 MISAFCRSGCFEETKQ---LAGDFEAKYDKYDVVLLNSM--LCAYCRTGDMESVMHVMRK 55
MI+ + RSG F+++++ L D DK L N + L AY + G ME +++
Sbjct: 310 MITLYTRSGLFDKSEEVIVLMND-----DKVIANLENWLVQLNAYSQQGKMEEAKLILQS 364
Query: 56 LDELAISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRA 115
+ + +SP+ F+ LI + K A + + G P+E S+I G+
Sbjct: 365 MVDEGVSPNVVAFNTLITGYGKVSDMQKAKEVFNSLEKAGLAPDETTYRSMIEGFGRADK 424
Query: 116 HSEALSVYNMLRYS 129
+ EAL Y L+ S
Sbjct: 425 YDEALLYYRKLKES 438
Score = 44.3 bits (103), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 34/148 (22%), Positives = 66/148 (44%), Gaps = 11/148 (7%)
Query: 2 ISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAI 61
++A+ + G EE K + + +VV N+++ Y + DM+ V L++ +
Sbjct: 346 LNAYSQQGKMEEAKLILQSMVDEGVSPNVVAFNTLITGYGKVSDMQKAKEVFNSLEKAGL 405
Query: 62 SPDYNTFHILIKYFCKEKMY---MLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSE 118
+PD T+ +I+ F + Y +L YR + G QP ++I + + H E
Sbjct: 406 APDETTYRSMIEGFGRADKYDEALLYYRK---LKESGFQPNASNFYTMINLIAR---HDE 459
Query: 119 ALSVYNMLRYSKRSMCKALHEKILHILI 146
S +L+ + C+ I+ IL+
Sbjct: 460 NESAAEILKDMMAAGCQC--SSIITILV 485
Score = 43.9 bits (102), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 32/120 (26%), Positives = 55/120 (45%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
M++A+ ++G EE + +D N ML Y R G +E V +V+ +L
Sbjct: 799 MLNAYGKAGQLEEFAAVLQKMRRAKCDFDHYTYNIMLNIYGRKGWIEGVAYVLSELKSRG 858
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ PD +++ LIK + M A + M +M KG + ++LI L + EA+
Sbjct: 859 VEPDLYSYNTLIKAYGIAGMPEDAVKLMQEMRLKGINADRITYTNLIAALQRNENFLEAV 918
>gi|356561416|ref|XP_003548977.1| PREDICTED: pentatricopeptide repeat-containing protein At1g12300,
mitochondrial-like [Glycine max]
Length = 456
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 43/95 (45%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I A C+ G +E K L + + DVV S+L +C+ +++ + K+ E
Sbjct: 268 LIDALCKEGKVKEAKNLLAEMHYRGQPADVVTYTSLLDGFCKNQNLDKATALFMKMKEWG 327
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKG 95
I P+ T+ LI CK A + D+ KG
Sbjct: 328 IQPNKYTYTALIDGLCKGGRLKDAQKLFQDLLVKG 362
Score = 45.1 bits (105), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 31/154 (20%), Positives = 65/154 (42%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C+ E + A+ +V+ +++ +C G + ++ ++
Sbjct: 198 IIDGLCKDKLVNEAYDFYSEMNARGIFPNVITYTTLIGGFCLAGQLTGAFSLLNEMILKN 257
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
I+P+ T+ ILI CKE A + +MH +G + +SL+ K + +A
Sbjct: 258 INPNVYTYAILIDALCKEGKVKEAKNLLAEMHYRGQPADVVTYTSLLDGFCKNQNLDKAT 317
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLKDA 154
+++ ++ K + ++ L G LKDA
Sbjct: 318 ALFMKMKEWGIQPNKYTYTALIDGLCKGGRLKDA 351
Score = 35.8 bits (81), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 31/139 (22%), Positives = 59/139 (42%)
Query: 17 LAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFC 76
L+ E K + ++V LN ++ +C G M V+ K+ +L P+ T L+K C
Sbjct: 74 LSKQMEVKGIEPNLVTLNILINCFCHLGQMSFSFSVLGKILKLGYQPNTITLTTLMKGLC 133
Query: 77 KEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVYNMLRYSKRSMCKA 136
+ + + +G Q + +L+ L K+ A+ M+ S +
Sbjct: 134 LKGEVQKSVHFHDKVVAQGFQMNQVSYGTLLNGLCKIGETRCAIKFLRMIEDSSTGLNVV 193
Query: 137 LHEKILHILISGKLLKDAY 155
++ I+ L KL+ +AY
Sbjct: 194 MYNTIIDGLCKDKLVNEAY 212
>gi|357466003|ref|XP_003603286.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355492334|gb|AES73537.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1246
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/122 (27%), Positives = 57/122 (46%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I A C +G ++ K+L A D V +++ + + GD+E+V +++
Sbjct: 311 LIDALCAAGKLDKAKELYVKMRASSHSPDRVTYITLMDKFGKVGDLETVKRFWNEMEVDG 370
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+PD T+ ILI+ CK A+ + M KG P +++I L K R EAL
Sbjct: 371 YAPDVVTYTILIEALCKSGDVDRAFDMLDVMTTKGIFPNLHTYNTMICGLLKARRLDEAL 430
Query: 121 SV 122
+
Sbjct: 431 EL 432
Score = 45.4 bits (106), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 29/136 (21%), Positives = 58/136 (42%), Gaps = 20/136 (14%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLL----------NSMLCAYCRTGDMESVM 50
+I A C+SG D + +D DV+ N+M+C + ++ +
Sbjct: 381 LIEALCKSG----------DVDRAFDMLDVMTTKGIFPNLHTYNTMICGLLKARRLDEAL 430
Query: 51 HVMRKLDELAISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHL 110
++ ++ L + P ++ + I Y+ K A T M ++G P C++ ++ L
Sbjct: 431 ELLENMESLGVKPTAFSYVLFIDYYGKSGDPAKAIDTFETMKKRGIMPSIAACNASLYTL 490
Query: 111 GKMRAHSEALSVYNML 126
+ SEA ++N L
Sbjct: 491 AETGRISEAEDIFNDL 506
Score = 43.9 bits (102), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 36/156 (23%), Positives = 76/156 (48%), Gaps = 11/156 (7%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYD---KYDVVLLNSMLCAYCRTGDMESVMHVMRKLD 57
+I ++G E+ ++ FE D + V+ N ++ + ++G+++ + +K+
Sbjct: 907 LIDGLLKAGRSEQAMKI---FEEMLDYGCGPNSVIYNILINGFGKSGEIDFACELFKKMV 963
Query: 58 ELAISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHS 117
+ I PD ++ IL++ C A + ++ G P+ + +I LGK R
Sbjct: 964 KEGIRPDLKSYTILVECLCITGRIDEAVQYFEELKLTGLDPDTVSYNFIINGLGKSRRLD 1023
Query: 118 EALSVYNMLRYSKRSMCKALHEK---ILHILISGKL 150
EALS+++ ++ R + L+ ILH+ I+GK+
Sbjct: 1024 EALSLFSEMK--NRGISPDLYTYNALILHLGIAGKV 1057
Score = 42.7 bits (99), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 28/123 (22%), Positives = 59/123 (47%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ + ++G ++ QL + +K + DV+++NS++ + G +++ + +L L
Sbjct: 521 LMKCYSKAGQIDKATQLLSEMISKGCEPDVMIINSLINTLYKAGRVDAAWKMFGRLKNLK 580
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
++P T++IL+ KE + A M G P +SL+ L K A AL
Sbjct: 581 LAPTVVTYNILLTGLGKEGKILKALELFGSMTESGCPPNTITFNSLLDCLSKNDAVDLAL 640
Query: 121 SVY 123
++
Sbjct: 641 KMF 643
Score = 36.6 bits (83), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 31/120 (25%), Positives = 55/120 (45%), Gaps = 1/120 (0%)
Query: 34 NSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHR 93
N+ L TG + + L + +SPD T+++L+K + K A + + +M
Sbjct: 484 NASLYTLAETGRISEAEDIFNDLHKCGLSPDSVTYNMLMKCYSKAGQIDKATQLLSEMIS 543
Query: 94 KGHQPEEELCSSLIFHLGKMRAHSEALSVYNMLRYSKRSMCKALHEKILHILI-SGKLLK 152
KG +P+ + +SLI L K A ++ L+ K + + +L L GK+LK
Sbjct: 544 KGCEPDVMIINSLINTLYKAGRVDAAWKMFGRLKNLKLAPTVVTYNILLTGLGKEGKILK 603
>gi|116793480|gb|ABK26762.1| unknown [Picea sitchensis]
Length = 298
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/127 (21%), Positives = 60/127 (47%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
M+ + G +E +L G+ K + +V++ +++ +CR ++ + +K+ +
Sbjct: 133 MLDGLSKDGLVQEAMKLFGEMREKGNIPEVIVYTAVVEGFCRAKKLDDAKRIFKKMKDNG 192
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ P+ ++ +LI+ CK+K A ++M +G +P S+I K EA
Sbjct: 193 VVPNAFSYCVLIQGLCKDKKLEEAVDYSLEMLDQGWRPNVATFVSIIDGFCKELRSDEAK 252
Query: 121 SVYNMLR 127
+V N +
Sbjct: 253 AVINQFK 259
>gi|297723045|ref|NP_001173886.1| Os04g0349600 [Oryza sativa Japonica Group]
gi|255675357|dbj|BAH92614.1| Os04g0349600, partial [Oryza sativa Japonica Group]
Length = 260
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/107 (19%), Positives = 48/107 (44%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ CR+ C +E L A K+D++ N ++ A + G + + +
Sbjct: 96 VLGGLCRNNCTDEANMLLEKLFAMNVKFDIITFNIVISAMLKVGRRQEAKELFAAISTYG 155
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLI 107
+ P +T++++I KE+ Y A + + + G P+ L + ++
Sbjct: 156 LVPTVHTYNLMISNLIKEESYEEADNLFISVEKSGRAPDSRLLNHIV 202
>gi|297800104|ref|XP_002867936.1| hypothetical protein ARALYDRAFT_492917 [Arabidopsis lyrata subsp.
lyrata]
gi|297313772|gb|EFH44195.1| hypothetical protein ARALYDRAFT_492917 [Arabidopsis lyrata subsp.
lyrata]
Length = 817
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/141 (23%), Positives = 65/141 (46%)
Query: 2 ISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAI 61
I+AFC+ G EE +L E +VV N+++ +G + K+ E +
Sbjct: 259 INAFCKGGKVEEAIELFSKMEEAGVVPNVVTYNTVIDGLGMSGRYDEAFMFKEKMVERGV 318
Query: 62 SPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEALS 121
P T+ IL+K K K AY + +M KG P + ++LI L + + ++A+
Sbjct: 319 EPTLITYSILVKGLTKAKRIGDAYCVLKEMTEKGFPPNVIVYNNLIDSLIEAGSLNKAIE 378
Query: 122 VYNMLRYSKRSMCKALHEKIL 142
+ +++ S+ + + ++
Sbjct: 379 IKDLMVSKGLSLTSSTYNTLI 399
Score = 40.0 bits (92), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 31/124 (25%), Positives = 52/124 (41%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+IS C+ G + +L F K D N++L C G +E + +++
Sbjct: 468 LISGLCKHGKHSKAVELWLKFLNKGFLVDTKTSNALLHGLCEAGKLEEGFRIQKEILGRG 527
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
D +++ LI C K A+ M +M +KG +P+ S LI L M EA+
Sbjct: 528 FVMDRVSYNTLISGCCGNKKLDEAFMFMDEMVKKGLKPDNYTYSILIRGLLNMNKVEEAI 587
Query: 121 SVYN 124
+
Sbjct: 588 QFWG 591
Score = 39.7 bits (91), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 28/113 (24%), Positives = 53/113 (46%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
MI C++ EE ++L + + + + V+ N ++ AYCR+G + + + +
Sbjct: 608 MIDGCCKAERTEEGQKLFDEMMSNNLQPNTVVYNHLIGAYCRSGRLSMALELREDMKHKG 667
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKM 113
ISP+ T+ LIK A + +M +G +P ++LI GK+
Sbjct: 668 ISPNSATYTSLIKGMSIISRVEEAKLLLEEMRMEGLEPNVFHYTALIDGYGKL 720
>gi|359472741|ref|XP_003631192.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g19890-like [Vitis vinifera]
Length = 708
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/150 (26%), Positives = 65/150 (43%), Gaps = 2/150 (1%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+IS FCR +E+++L + + SM+C YCR G+ + + +++
Sbjct: 511 LISTFCRQKQMKESERLFEEAVSLGLIPTKKTYTSMICGYCRYGNTSLAVKLFQRMSNHG 570
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+PD T+ LI CKE A M KG P E +L + K S A+
Sbjct: 571 CAPDSITYGALISGLCKESKLDDARNLYDAMMDKGLSPCEVTRLTLAYEYCKKDDSSTAI 630
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKL 150
+V + R KR + ++ + + GKL
Sbjct: 631 NVLD--RLEKRQWIRTVNTLVRKLCSEGKL 658
Score = 42.4 bits (98), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 31/126 (24%), Positives = 57/126 (45%), Gaps = 3/126 (2%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKY--DVVLLNSMLCAYCRTGDMESVMHVMRKLDE 58
+I C+ G E+ +L + D Y +V +M+ YC+ + ++ ++ E
Sbjct: 335 LIDGLCKKGWTEKAFRLFLKL-VRSDGYKPNVHTYTAMINGYCKEDKLNRAEMLLSRMQE 393
Query: 59 LAISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSE 118
+ P+ NT+ LI CK ++ AY M M ++G P +++I L K + E
Sbjct: 394 QGLVPNTNTYTTLIDGHCKVGNFVRAYELMDLMGKEGFSPNIYTYNAIIDGLCKKGSLDE 453
Query: 119 ALSVYN 124
A + N
Sbjct: 454 AYRLLN 459
Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 23/107 (21%), Positives = 47/107 (43%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C+ G +E +L + D V ++ +CR D + K+ ++
Sbjct: 441 IIDGLCKKGSLDEAYRLLNKVSVHGLQADGVTYTILMSVHCRQADTNRSLVFFNKMLKVG 500
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLI 107
+PD +++ LI FC++K + R + G P ++ +S+I
Sbjct: 501 FTPDIHSYTTLISTFCRQKQMKESERLFEEAVSLGLIPTKKTYTSMI 547
Score = 40.0 bits (92), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 22/85 (25%), Positives = 42/85 (49%)
Query: 39 AYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQP 98
A+C+ G + V+ K+ E+ ++P+ F LI CK+ A+ + +M R+G +P
Sbjct: 268 AFCQKGYVNRVVGYFWKMVEMGLAPNVINFTALINGLCKQGSIKQAFELLEEMVRRGWKP 327
Query: 99 EEELCSSLIFHLGKMRAHSEALSVY 123
++LI L K +A ++
Sbjct: 328 NVYTHTTLIDGLCKKGWTEKAFRLF 352
>gi|223946379|gb|ACN27273.1| unknown [Zea mays]
gi|413924536|gb|AFW64468.1| pentatricopeptide repeat 5 [Zea mays]
Length = 386
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/122 (23%), Positives = 58/122 (47%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ AF ++G ++ L D + DV N +L AY + G ++ + V+ ++
Sbjct: 92 LLRAFAQAGDTKQVDMLFKDLDESVVSPDVYTYNGVLDAYGKNGMIKEMESVLVRMKSTQ 151
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
PD TF+ILI + +++ + + + R +P +S+I + G+ R +A
Sbjct: 152 CRPDVITFNILIDSYGRKQTFDKMEQVFKSLLRSKERPTHPTFNSMITNYGRARLREKAE 211
Query: 121 SV 122
SV
Sbjct: 212 SV 213
Score = 38.1 bits (87), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 26/101 (25%), Positives = 47/101 (46%)
Query: 30 VVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYMLAYRTMV 89
+V N +L A+ + GD + V + + LDE +SPD T++ ++ + K M +V
Sbjct: 86 IVTYNILLRAFAQAGDTKQVDMLFKDLDESVVSPDVYTYNGVLDAYGKNGMIKEMESVLV 145
Query: 90 DMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVYNMLRYSK 130
M +P+ + LI G+ + + V+ L SK
Sbjct: 146 RMKSTQCRPDVITFNILIDSYGRKQTFDKMEQVFKSLLRSK 186
>gi|222640310|gb|EEE68442.1| hypothetical protein OsJ_26820 [Oryza sativa Japonica Group]
Length = 621
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 47/97 (48%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I A C+ EE + G K K + V+ S++ C+TG +++ +M+K+
Sbjct: 323 LIDALCKREKVEEAQLFLGSLVKKGVKVNEVVYTSLIDGLCKTGKIDAADELMQKMISEG 382
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQ 97
PD +++ LI C++K A + DM KG Q
Sbjct: 383 FVPDAHSYSSLIDGLCRQKKLSQATLMLEDMMEKGIQ 419
Score = 40.8 bits (94), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 28/119 (23%), Positives = 50/119 (42%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I +C +G E ++ + +V ++ C++G +E M + ++ E
Sbjct: 218 LIDGYCNAGEMEHALKVFEGMDGNRCSPNVRTYTELIHGLCKSGKVERAMVLFSRMVEAG 277
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEA 119
+ P+ T+ LI+ C E A+R + M G P + S LI L K EA
Sbjct: 278 LEPNVVTYTALIQGQCNEGHLQCAFRLLHLMETNGLVPNDWTFSVLIDALCKREKVEEA 336
Score = 38.1 bits (87), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 22/79 (27%), Positives = 36/79 (45%)
Query: 29 DVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYMLAYRTM 88
++V+ N+++ YC G+ME + V +D SP+ T+ LI CK A
Sbjct: 211 NIVVYNALIDGYCNAGEMEHALKVFEGMDGNRCSPNVRTYTELIHGLCKSGKVERAMVLF 270
Query: 89 VDMHRKGHQPEEELCSSLI 107
M G +P ++LI
Sbjct: 271 SRMVEAGLEPNVVTYTALI 289
Score = 37.4 bits (85), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 25/125 (20%), Positives = 55/125 (44%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I R E K++ A D+V + +YC G ME ++ ++ +
Sbjct: 428 IIDELVREVGSEGPKKIFDKMIATGINPDIVTYTVFVRSYCEEGRMEDAESMIVQMVDRG 487
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ P+ T++ LI+ + + A+ T M KG +P E+ + L+ + K + ++
Sbjct: 488 VFPNLVTYNTLIRGYANLGLVSQAFSTFEVMVGKGWKPNEDSYTVLLRLVVKKSSSDNSV 547
Query: 121 SVYNM 125
++ +
Sbjct: 548 DIWKI 552
Score = 36.6 bits (83), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 29/121 (23%), Positives = 53/121 (43%), Gaps = 3/121 (2%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C+SG E L + +VV +++ C G ++ ++ ++
Sbjct: 253 LIHGLCKSGKVERAMVLFSRMVEAGLEPNVVTYTALIQGQCNEGHLQCAFRLLHLMETNG 312
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHL---GKMRAHS 117
+ P+ TF +LI CK + A + + +KG + E + +SLI L GK+ A
Sbjct: 313 LVPNDWTFSVLIDALCKREKVEEAQLFLGSLVKKGVKVNEVVYTSLIDGLCKTGKIDAAD 372
Query: 118 E 118
E
Sbjct: 373 E 373
>gi|297823043|ref|XP_002879404.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297325243|gb|EFH55663.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 605
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/127 (24%), Positives = 55/127 (43%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I +C+ G EE K+L + +K + + + N M+ AYC+ G ++ + +
Sbjct: 456 LIDVYCKEGNVEEAKRLFVEMSSKEVQPNAITYNVMIYAYCKQGKVKEARKLWANMKANG 515
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ PD T+ LI C A R +M KG + +I L K EA
Sbjct: 516 MDPDSYTYTSLIHGECIADNVDEAMRLFSEMGLKGLDQNSVTYTVMISGLSKAGKSDEAF 575
Query: 121 SVYNMLR 127
+Y+ ++
Sbjct: 576 GLYDEIK 582
Score = 39.7 bits (91), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 23/105 (21%), Positives = 47/105 (44%)
Query: 3 SAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAIS 62
S F R ++E KQ + V +++ YC+ G++E + ++ +
Sbjct: 423 SCFNRLKRYDEAKQWLFRMMEGGVRLSTVSYTNLIDVYCKEGNVEEAKRLFVEMSSKEVQ 482
Query: 63 PDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLI 107
P+ T++++I +CK+ A + +M G P+ +SLI
Sbjct: 483 PNAITYNVMIYAYCKQGKVKEARKLWANMKANGMDPDSYTYTSLI 527
Score = 36.6 bits (83), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 28/123 (22%), Positives = 51/123 (41%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ +CR G +E + E K + DV N++ + R + + ++ E
Sbjct: 386 LINGYCRKGMIDEASMIYDVMEKKGFQADVFTCNTIASCFNRLKRYDEAKQWLFRMMEGG 445
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ ++ LI +CKE A R V+M K QP + +I+ K EA
Sbjct: 446 VRLSTVSYTNLIDVYCKEGNVEEAKRLFVEMSSKEVQPNAITYNVMIYAYCKQGKVKEAR 505
Query: 121 SVY 123
++
Sbjct: 506 KLW 508
>gi|242065566|ref|XP_002454072.1| hypothetical protein SORBIDRAFT_04g024190 [Sorghum bicolor]
gi|241933903|gb|EES07048.1| hypothetical protein SORBIDRAFT_04g024190 [Sorghum bicolor]
Length = 820
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/128 (24%), Positives = 62/128 (48%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+++A+CR G ++ + K + +V N+M+ +C G + M ++ ++ E
Sbjct: 306 VVNAYCREGRMSGAVRVFESMKLKGCEPNVWTYNAMVQGFCNVGKVYKAMALLDQMRECG 365
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ PD T+++LI+ C + A+R + M G ++ + LI L K EA
Sbjct: 366 VEPDVVTYNLLIRGQCIDGHIESAFRLLRLMEGNGLAADQYTYNVLIDALCKTGKVDEAC 425
Query: 121 SVYNMLRY 128
S+++ L Y
Sbjct: 426 SLFDGLEY 433
Score = 40.4 bits (93), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 31/121 (25%), Positives = 49/121 (40%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C G E +L E D N ++ A C+TG ++ + L+
Sbjct: 376 LIRGQCIDGHIESAFRLLRLMEGNGLAADQYTYNVLIDALCKTGKVDEACSLFDGLEYRG 435
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
I P+ TF+ +I CK + +A + M G P+ S I +L K + E L
Sbjct: 436 IRPNSVTFNTVINGLCKGGKFDVACTFLEKMVSAGCAPDTYTYSPFIENLCKTKGSREGL 495
Query: 121 S 121
S
Sbjct: 496 S 496
Score = 38.1 bits (87), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 30/127 (23%), Positives = 59/127 (46%), Gaps = 4/127 (3%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I FC +G +E +L + E + D Y L LC R G E +++++K+ EL
Sbjct: 205 LIEGFCETGRVDEALELFRELE-QPDMYTHAALVKGLCD-ARRG--EEGLYMLQKMKELG 260
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
P + L+ +C+E+ A + + +M G P C++++ + S A+
Sbjct: 261 WRPATRAYAALVDLWCREQKAEEAEKMLNEMFDNGLVPCAVTCTAVVNAYCREGRMSGAV 320
Query: 121 SVYNMLR 127
V+ ++
Sbjct: 321 RVFESMK 327
Score = 35.4 bits (80), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 27/118 (22%), Positives = 51/118 (43%), Gaps = 22/118 (18%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I +CR+ + + L + D V +++ +C TG ++ + + R+L++
Sbjct: 170 LILGYCRTQQLDVAQDLFDKMPLRGFSQDAVSYAALIEGFCETGRVDEALELFRELEQ-- 227
Query: 61 ISPDYNTFHILIKYFC-----KEKMYML-------------AYRTMVDMHRKGHQPEE 100
PD T L+K C +E +YML AY +VD+ + + EE
Sbjct: 228 --PDMYTHAALVKGLCDARRGEEGLYMLQKMKELGWRPATRAYAALVDLWCREQKAEE 283
>gi|15228825|ref|NP_188906.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75274241|sp|Q9LUJ4.1|PP248_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g22670, mitochondrial; Flags: Precursor
gi|9279685|dbj|BAB01242.1| unnamed protein product [Arabidopsis thaliana]
gi|332643142|gb|AEE76663.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 562
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/123 (25%), Positives = 55/123 (44%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I FC++ F++ + + + DVV S + AYC+ GD V ++ ++ E
Sbjct: 279 LIHGFCKARKFDDARAMMDLMKVTEFTPDVVTYTSFVEAYCKEGDFRRVNEMLEEMRENG 338
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+P+ T+ I++ K K A M G P+ + SSLI L K +A
Sbjct: 339 CNPNVVTYTIVMHSLGKSKQVAEALGVYEKMKEDGCVPDAKFYSSLIHILSKTGRFKDAA 398
Query: 121 SVY 123
++
Sbjct: 399 EIF 401
Score = 43.1 bits (100), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 28/128 (21%), Positives = 53/128 (41%)
Query: 27 KYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYMLAYR 86
K D N ++ +C+ + +M + +PD T+ ++ +CKE +
Sbjct: 270 KPDARTFNILIHGFCKARKFDDARAMMDLMKVTEFTPDVVTYTSFVEAYCKEGDFRRVNE 329
Query: 87 TMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVYNMLRYSKRSMCKALHEKILHILI 146
+ +M G P + ++ LGK + +EAL VY ++ + ++HIL
Sbjct: 330 MLEEMRENGCNPNVVTYTIVMHSLGKSKQVAEALGVYEKMKEDGCVPDAKFYSSLIHILS 389
Query: 147 SGKLLKDA 154
KDA
Sbjct: 390 KTGRFKDA 397
>gi|224102411|ref|XP_002312667.1| predicted protein [Populus trichocarpa]
gi|222852487|gb|EEE90034.1| predicted protein [Populus trichocarpa]
Length = 512
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 48/109 (44%)
Query: 2 ISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAI 61
IS C++ F L D E + D+ N L R ES + V ++ E
Sbjct: 86 ISGLCQTKEFTFIDNLLKDMEKLHCVPDIWAFNIYLNLLFRENREESALEVFGRMVERGR 145
Query: 62 SPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHL 110
PD TF I+I CK K + A + ++M KG +P+ + C +L L
Sbjct: 146 EPDVVTFTIIIDGLCKMKKFDAAVQFWLNMLDKGIRPDNKACVALAVGL 194
Score = 40.0 bits (92), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 40/81 (49%)
Query: 29 DVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYMLAYRTM 88
DVV N+++ A+C + + ++ I+PD TF ILIK F +E +A + +
Sbjct: 324 DVVSYNTIIKAFCSISNNRRAYKLFEEMGRKGIAPDVVTFTILIKAFLREGNSDMAKKLL 383
Query: 89 VDMHRKGHQPEEELCSSLIFH 109
M G P+ +++I H
Sbjct: 384 DLMAGMGLLPDRIFYTTIIDH 404
Score = 38.9 bits (89), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 16/83 (19%), Positives = 39/83 (46%)
Query: 17 LAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFC 76
+ G + ++ N+++ +CR G ++ + ++ + PD T+++L+ Y C
Sbjct: 207 IIGVISGGLSEVSTLVYNALISGFCRAGRIDKALAMVSFMSRTGCKPDLVTYNVLLNYCC 266
Query: 77 KEKMYMLAYRTMVDMHRKGHQPE 99
E M+ A + + M +P+
Sbjct: 267 NEFMFEEAVKLLKKMECSAIEPD 289
Score = 38.5 bits (88), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 43/89 (48%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+IS FCR+G ++ + K D+V N +L C E + +++K++ A
Sbjct: 226 LISGFCRAGRIDKALAMVSFMSRTGCKPDLVTYNVLLNYCCNEFMFEEAVKLLKKMECSA 285
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMV 89
I PD +++ L+K CK AY MV
Sbjct: 286 IEPDVYSYNQLLKAHCKANHPDKAYLFMV 314
Score = 37.0 bits (84), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 26/107 (24%), Positives = 47/107 (43%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C+SG E + D K DVV N+++ +C++ + VMH+ ++ +
Sbjct: 401 IIDHHCKSGKVEMAHSIFCDMVEKGITPDVVSYNALINGFCKSLRVGEVMHLYEQMLQRG 460
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLI 107
PD T+ ++I +E A R M +G + + LI
Sbjct: 461 SFPDEVTYKLIIGALVRENKLSDACRVWDQMMERGLTLDRGISEMLI 507
Score = 36.6 bits (83), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 33/154 (21%), Positives = 62/154 (40%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I AFC +L + K DVV ++ A+ R G+ + ++ + +
Sbjct: 331 IIKAFCSISNNRRAYKLFEEMGRKGIAPDVVTFTILIKAFLREGNSDMAKKLLDLMAGMG 390
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ PD + +I + CK +A+ DM KG P+ ++LI K E +
Sbjct: 391 LLPDRIFYTTIIDHHCKSGKVEMAHSIFCDMVEKGITPDVVSYNALINGFCKSLRVGEVM 450
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLKDA 154
+Y + + ++ I+ L+ L DA
Sbjct: 451 HLYEQMLQRGSFPDEVTYKLIIGALVRENKLSDA 484
>gi|90657590|gb|ABD96889.1| hypothetical protein [Cleome spinosa]
Length = 719
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/146 (24%), Positives = 61/146 (41%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+IS C G +E ++ K D + NS++ +C+ G + M+++ +L
Sbjct: 549 IISELCSRGKSDEASEMFKKMSETGIKADAITYNSLIRGFCKEGKVGKSMNLLNELVAQG 608
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ P +++ LI C+ A R DM KG +P L LI L K +E +
Sbjct: 609 LQPSASSYASLIIQLCQNGDAESAKRLWGDMVSKGIEPHANLREHLISGLCKQGRATEGM 668
Query: 121 SVYNMLRYSKRSMCKALHEKILHILI 146
+ +K KA E + LI
Sbjct: 669 DRLMGMLENKIKPKKAAFEDLAECLI 694
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 31/126 (24%), Positives = 55/126 (43%), Gaps = 6/126 (4%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRT---GDMESVMHVMRKLD 57
+I AFC SG +L F N ++ +C+ M V+H M +
Sbjct: 234 LIQAFCDSGQVARGYELLNQFLKTGLDPGNPTYNKLIAGFCQAKNYASMSEVLHTMIARN 293
Query: 58 ELAISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHS 117
L P T+ +I CK + + AYR D+ +G+ P+ + +++I L +M +
Sbjct: 294 HL---PTIYTYQEIINGLCKNEECLEAYRVFNDLKDRGYAPDRVMYTTMIHGLCEMGSFG 350
Query: 118 EALSVY 123
EA ++
Sbjct: 351 EARKLW 356
Score = 44.3 bits (103), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 28/110 (25%), Positives = 48/110 (43%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
M+ +SG FE ++L + K N ++ C G + + +K+ E
Sbjct: 514 MLHGSLKSGDFEHVRELYNETCNKGYGTTTATCNKIISELCSRGKSDEASEMFKKMSETG 573
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHL 110
I D T++ LI+ FCKE + + ++ +G QP +SLI L
Sbjct: 574 IKADAITYNSLIRGFCKEGKVGKSMNLLNELVAQGLQPSASSYASLIIQL 623
Score = 43.5 bits (101), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 24/98 (24%), Positives = 46/98 (46%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+IS C G +E ++ + D + NS++ +C+ G ++ M+++ +L
Sbjct: 409 IISELCSRGKSDEAFEVFKKMSETGIQADAITYNSLIRGFCKEGKVDERMNLLNELVAQD 468
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQP 98
P + + +LI CK+ + A R + DM KG P
Sbjct: 469 PQPSVSLYELLIIKSCKDGDFEAAKRLLGDMSSKGLHP 506
Score = 39.3 bits (90), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 35/78 (44%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
M+ +SG FE +L + K V N ++ C G + V +K+ E
Sbjct: 374 MLHGSLKSGDFERACELYNEMCNKGYGTTTVTCNKIISELCSRGKSDEAFEVFKKMSETG 433
Query: 61 ISPDYNTFHILIKYFCKE 78
I D T++ LI+ FCKE
Sbjct: 434 IQADAITYNSLIRGFCKE 451
>gi|255547043|ref|XP_002514579.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223546183|gb|EEF47685.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 840
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/121 (21%), Positives = 60/121 (49%)
Query: 4 AFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISP 63
FC + + ++L + + + V +++ YC G+M+S++ ++ ++ AI P
Sbjct: 570 GFCINRKLSQARRLLDTIKLHGLEPNAVTYTTLMNVYCEEGNMQSLLELLSEMKAKAIGP 629
Query: 64 DYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVY 123
+ T+ ++IK CK+ + + + DM G P++ +++I K R +A +Y
Sbjct: 630 THITYTVVIKGLCKQWKLQESCQLLEDMDAVGLTPDQVSYNTIIQAFCKARDMRKAFQLY 689
Query: 124 N 124
+
Sbjct: 690 D 690
Score = 39.3 bits (90), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 37/76 (48%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C+ +E+ QL D +A D V N+++ A+C+ DM + K+
Sbjct: 637 VIKGLCKQWKLQESCQLLEDMDAVGLTPDQVSYNTIIQAFCKARDMRKAFQLYDKMLLHN 696
Query: 61 ISPDYNTFHILIKYFC 76
+ P T++ILI FC
Sbjct: 697 LEPTSVTYNILINGFC 712
Score = 38.9 bits (89), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 26/96 (27%), Positives = 46/96 (47%), Gaps = 3/96 (3%)
Query: 29 DVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYMLAYRTM 88
D++L N M+ Y + G+ + + ++L E ISP TF+ L+ FC + A R +
Sbjct: 525 DIILYNIMIDGYIKRGNTREAVKLYKQLGEKGISPTIVTFNSLMYGFCINRKLSQARRLL 584
Query: 89 VDMHRKGHQPEEELCSSLIF---HLGKMRAHSEALS 121
+ G +P ++L+ G M++ E LS
Sbjct: 585 DTIKLHGLEPNAVTYTTLMNVYCEEGNMQSLLELLS 620
Score = 36.6 bits (83), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 23/99 (23%), Positives = 42/99 (42%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ CR F++ D E K + VV N+++ YC+ G ++ + +
Sbjct: 252 VVDGLCRQSRFQDAVLFFQDTEGKEFQPSVVSFNTIMSRYCKLGFVDVAKSFFCMMLKHG 311
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPE 99
+ PD +++ILI C A DM G +P+
Sbjct: 312 LLPDAYSYNILIHGLCIAGSMGEALDLKNDMENHGLEPD 350
Score = 35.4 bits (80), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 19/95 (20%), Positives = 46/95 (48%)
Query: 29 DVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYMLAYRTM 88
++V ++C +C+ G++E + + +++ + +L+ CK + +A++
Sbjct: 385 NLVTYTVLICGHCQIGNVEEALKLYKEMISHGFQLSIISSTVLLGSLCKSRQVDVAFKLF 444
Query: 89 VDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVY 123
+M G +P+ S+LI L K +A+ +Y
Sbjct: 445 CEMEANGLRPDLITYSTLIHGLCKQGEVQQAILLY 479
>gi|357138636|ref|XP_003570896.1| PREDICTED: pentatricopeptide repeat-containing protein At4g26680,
mitochondrial-like [Brachypodium distachyon]
Length = 500
Score = 47.8 bits (112), Expect = 0.002, Method: Composition-based stats.
Identities = 24/92 (26%), Positives = 50/92 (54%), Gaps = 1/92 (1%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRT-GDMESVMHVMRKLDEL 59
M++AFC G + ++ + VV N+++ AYCR G +E+ + + R++++
Sbjct: 209 MLAAFCALGRVADAAKMLDEMPEWGVYRTVVSFNTLIAAYCRGHGGLENALELKRRMEKE 268
Query: 60 AISPDYNTFHILIKYFCKEKMYMLAYRTMVDM 91
+PD T++ +I CKE+ A + +++M
Sbjct: 269 GCAPDAVTYNTIIHGLCKERQMRQANQLLIEM 300
Score = 45.8 bits (107), Expect = 0.005, Method: Composition-based stats.
Identities = 24/114 (21%), Positives = 54/114 (47%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I CR G +E++ L + + + + + +++ + +T + E + ++ + +
Sbjct: 350 LILGLCREGKVKESEHLLQELDKRGLEPNASTFAALITGHWKTQNSERALQLLNVMKKSG 409
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMR 114
P+Y+TF I++ FCK K + A M D+ + P++ L L K +
Sbjct: 410 FHPNYDTFKIVVSTFCKNKDFEGAVDVMKDILGRCMAPDKALLHEFFDGLSKAK 463
Score = 39.7 bits (91), Expect = 0.47, Method: Composition-based stats.
Identities = 19/72 (26%), Positives = 38/72 (52%)
Query: 27 KYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYMLAYR 86
+ D+V N+++ CR G ++ H++++LD+ + P+ +TF LI K + A +
Sbjct: 341 QLDIVTYNTLILGLCREGKVKESEHLLQELDKRGLEPNASTFAALITGHWKTQNSERALQ 400
Query: 87 TMVDMHRKGHQP 98
+ M + G P
Sbjct: 401 LLNVMKKSGFHP 412
>gi|302808965|ref|XP_002986176.1| hypothetical protein SELMODRAFT_182249 [Selaginella moellendorffii]
gi|300146035|gb|EFJ12707.1| hypothetical protein SELMODRAFT_182249 [Selaginella moellendorffii]
Length = 609
Score = 47.8 bits (112), Expect = 0.002, Method: Composition-based stats.
Identities = 34/135 (25%), Positives = 63/135 (46%), Gaps = 4/135 (2%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I AFC+SG E ++ + + DVV N+++ C+ G + ++ ++ E
Sbjct: 360 IIHAFCKSGKLLEAQKTLQEMRKQRKSPDVVTYNTVIDGLCKLGKIAEAQVILEQMQESG 419
Query: 61 -ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEA 119
+ PD T+ +I CK M + A + + M + G P+ +++I L K EA
Sbjct: 420 DVLPDVVTYSTVINGLCKSDMLVEAQKLLDRMCKAGCNPDVVTYTTIIDGLCKCGRLEEA 479
Query: 120 LSVYNMLRYSKRSMC 134
+L+ KR+ C
Sbjct: 480 ---EYLLQGMKRAGC 491
Score = 46.6 bits (109), Expect = 0.003, Method: Composition-based stats.
Identities = 26/129 (20%), Positives = 61/129 (47%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C+S F E K++ + + + D ++++ C+ +E ++R++
Sbjct: 290 LIDGLCKSQKFLEAKEVLEEMKTRGVTPDAFTYSALIHGLCKADKIEEAEQMLRRMAGSG 349
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+PD + +I FCK + A +T+ +M ++ P+ +++I L K+ +EA
Sbjct: 350 CTPDVVVYSSIIHAFCKSGKLLEAQKTLQEMRKQRKSPDVVTYNTVIDGLCKLGKIAEAQ 409
Query: 121 SVYNMLRYS 129
+ ++ S
Sbjct: 410 VILEQMQES 418
Score = 46.6 bits (109), Expect = 0.003, Method: Composition-based stats.
Identities = 30/132 (22%), Positives = 59/132 (44%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ FC+ G ++ ++L G AK + +VV ++++ C++ V+ ++
Sbjct: 255 LVDGFCKRGNVDDARKLLGIMVAKGMRPNVVTYSALIDGLCKSQKFLEAKEVLEEMKTRG 314
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
++PD T+ LI CK A + + M G P+ + SS+I K EA
Sbjct: 315 VTPDAFTYSALIHGLCKADKIEEAEQMLRRMAGSGCTPDVVVYSSIIHAFCKSGKLLEAQ 374
Query: 121 SVYNMLRYSKRS 132
+R ++S
Sbjct: 375 KTLQEMRKQRKS 386
Score = 45.4 bits (106), Expect = 0.007, Method: Composition-based stats.
Identities = 34/128 (26%), Positives = 61/128 (47%), Gaps = 7/128 (5%)
Query: 29 DVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYMLAYRTM 88
+V+ NS++ +C+ G+++ ++ + + P+ T+ LI CK + ++ A +
Sbjct: 248 NVMTFNSLVDGFCKRGNVDDARKLLGIMVAKGMRPNVVTYSALIDGLCKSQKFLEAKEVL 307
Query: 89 VDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVYNMLRYSKRSMCK---ALHEKILHIL 145
+M +G P+ S+LI L K EA MLR S C ++ I+H
Sbjct: 308 EEMKTRGVTPDAFTYSALIHGLCKADKIEEA---EQMLRRMAGSGCTPDVVVYSSIIHAF 364
Query: 146 I-SGKLLK 152
SGKLL+
Sbjct: 365 CKSGKLLE 372
Score = 45.4 bits (106), Expect = 0.008, Method: Composition-based stats.
Identities = 34/127 (26%), Positives = 61/127 (48%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+AF R+ EE +L + + ++V N ++ A C+ + + V++K+ E
Sbjct: 185 LIAAFARAKKLEEAMKLLEEMRERGCPPNLVTYNVLVDALCKLSMVGAAQDVVKKMIEGG 244
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+P+ TF+ L+ FCK A + + M KG +P S+LI L K + EA
Sbjct: 245 FAPNVMTFNSLVDGFCKRGNVDDARKLLGIMVAKGMRPNVVTYSALIDGLCKSQKFLEAK 304
Query: 121 SVYNMLR 127
V ++
Sbjct: 305 EVLEEMK 311
Score = 38.1 bits (87), Expect = 1.1, Method: Composition-based stats.
Identities = 23/97 (23%), Positives = 42/97 (43%), Gaps = 7/97 (7%)
Query: 18 AGDFEAKYDKY-------DVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHI 70
AGD + D +VV +++ A+ R +E M ++ ++ E P+ T+++
Sbjct: 160 AGDLDGAMDHLRSMGCDPNVVTYTALIAAFARAKKLEEAMKLLEEMRERGCPPNLVTYNV 219
Query: 71 LIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLI 107
L+ CK M A + M G P +SL+
Sbjct: 220 LVDALCKLSMVGAAQDVVKKMIEGGFAPNVMTFNSLV 256
>gi|224088774|ref|XP_002308534.1| predicted protein [Populus trichocarpa]
gi|222854510|gb|EEE92057.1| predicted protein [Populus trichocarpa]
Length = 567
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/151 (25%), Positives = 71/151 (47%), Gaps = 5/151 (3%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESV-MHVMRKLDEL 59
MI FC+ G + +++ F+ + +++ N+++ YC+ GDME+ + + R ++
Sbjct: 206 MIRGFCKVGMIDNARKV---FDEMICEPNLITCNTLINGYCKKGDMENARIFLCRMMESK 262
Query: 60 AISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEA 119
PD T+ LI +CK+ A + M M +G P +++I+ L EA
Sbjct: 263 DCLPDTVTYSTLIDGYCKKGELNEARKWMDGMLIRGCNPNLWTYNAIIYGLCLRGNVDEA 322
Query: 120 LSVYNMLRYSKRSMCKALHEKILHIL-ISGK 149
+ +R + A H IL L ++GK
Sbjct: 323 RRLLTKMRLNGVKENVATHLSILKGLSVAGK 353
>gi|116789832|gb|ABK25404.1| unknown [Picea sitchensis]
Length = 278
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/123 (27%), Positives = 56/123 (45%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
MIS + ++G F++ +L + + K V N+ML AY R+G V + +
Sbjct: 51 MISCYGKAGFFQDAAKLFSRMQQEGIKPGKVTYNTMLDAYARSGLHTRAEEVFNDMQDEG 110
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
SPD T+ LI + + + A + MHR+G P + L+F GK +A
Sbjct: 111 YSPDSYTYLSLICAYTNCQRFQEAEDLLKRMHRQGLAPGLVHFNHLVFAFGKAGLVEDAT 170
Query: 121 SVY 123
+Y
Sbjct: 171 RLY 173
>gi|125548475|gb|EAY94297.1| hypothetical protein OsI_16066 [Oryza sativa Indica Group]
Length = 602
Score = 47.8 bits (112), Expect = 0.002, Method: Composition-based stats.
Identities = 27/126 (21%), Positives = 57/126 (45%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I + CR G ++ QL ++V N+++ C +++ M ++ K+
Sbjct: 313 VIYSLCRKGLLQQAIQLLEKMSKHGCTANIVTYNAIINGLCEQRNVDGAMGLLSKMKSYG 372
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
PD T++ L+K C ++ A M +M + G P+ ++LI L + +A+
Sbjct: 373 CKPDIVTYNTLLKGLCSAAQWVDAEELMDNMTQNGCLPDNVTFNTLIGFLCQKGLMVDAI 432
Query: 121 SVYNML 126
V+ +
Sbjct: 433 EVFKQM 438
Score = 43.9 bits (102), Expect = 0.023, Method: Composition-based stats.
Identities = 26/98 (26%), Positives = 43/98 (43%)
Query: 27 KYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYMLAYR 86
K D+V N++L C +M + + PD TF+ LI + C++ + + A
Sbjct: 374 KPDIVTYNTLLKGLCSAAQWVDAEELMDNMTQNGCLPDNVTFNTLIGFLCQKGLMVDAIE 433
Query: 87 TMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVYN 124
M KG P S++I L K +AL ++N
Sbjct: 434 VFKQMPDKGCTPNSITYSTIISGLAKATKLDQALELFN 471
Score = 37.7 bits (86), Expect = 1.4, Method: Composition-based stats.
Identities = 21/98 (21%), Positives = 44/98 (44%), Gaps = 3/98 (3%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+ +CR+G + +++ G + + Y N ++ C G + + V+ +
Sbjct: 141 LTDGYCRAGRLGDARRVVGGMPVQPNAYT---YNPLIHTLCERGQVRDALSVLDDMLCRG 197
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQP 98
+PD T++IL++ CK + Y A + M +G P
Sbjct: 198 CAPDVVTYNILLEATCKGRGYRQAMELIDLMRAEGCTP 235
Score = 35.8 bits (81), Expect = 6.7, Method: Composition-based stats.
Identities = 21/110 (19%), Positives = 48/110 (43%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ A C+ + + +L A+ + V N ++ C GD++ + ++R L
Sbjct: 208 LLEATCKGRGYRQAMELIDLMRAEGCTPNNVTYNVLMDGMCGEGDVDDALELLRNLPSHG 267
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHL 110
P ++ ++K C + + A + +M R+ P E + +I+ L
Sbjct: 268 CKPSTVNYNTVLKGLCSAERWGDADELVTEMLRENCPPNEATFNVVIYSL 317
>gi|42408236|dbj|BAD09393.1| putative PPR protein [Oryza sativa Japonica Group]
gi|125601932|gb|EAZ41257.1| hypothetical protein OsJ_25765 [Oryza sativa Japonica Group]
Length = 798
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 37/74 (50%)
Query: 34 NSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHR 93
NS+L YC +G + V +++ + PD T++ L+ Y CK M A + M +
Sbjct: 277 NSLLHGYCSSGKPNDAIGVFKRMCRDGVEPDVFTYNTLMGYLCKNGRSMEARKIFDSMVK 336
Query: 94 KGHQPEEELCSSLI 107
+GH+P +L+
Sbjct: 337 RGHKPNSATYGTLL 350
Score = 38.9 bits (89), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 26/124 (20%), Positives = 55/124 (44%), Gaps = 2/124 (1%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYD-KYDVVLLNSMLCAYCRTGDMESVMHVMRKLDEL 59
+++ C+ G K + D + D + DV+ N+++ YC G ++ ++ +
Sbjct: 489 LLNHLCKEGMVARAKNIF-DLMVRVDVQRDVITYNTLIDGYCLHGKVDEAAKLLEGMVLD 547
Query: 60 AISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEA 119
+ P+ T++ +I +CK A+ M KG P S+++ L + R + A
Sbjct: 548 GVKPNEVTYNTMINGYCKNGRIEDAFSLFRQMASKGVNPGIVTYSTILQGLFQARRTAAA 607
Query: 120 LSVY 123
+Y
Sbjct: 608 KELY 611
Score = 35.8 bits (81), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 26/126 (20%), Positives = 52/126 (41%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I + + G ++ L + D V ++ A C G ++ M +L
Sbjct: 384 LIGTYTKHGKVDDAMLLFSKMRRQGLNPDTVTYGIVMDALCMVGKVDDAMAQFGRLISEG 443
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
++PD F LI C + A V+M +G P ++L+ HL K + A
Sbjct: 444 LTPDAVVFRNLIHGLCARDKWDKAEELAVEMIGRGICPNNIFFNTLLNHLCKEGMVARAK 503
Query: 121 SVYNML 126
++++++
Sbjct: 504 NIFDLM 509
>gi|115475796|ref|NP_001061494.1| Os08g0300700 [Oryza sativa Japonica Group]
gi|34015356|gb|AAQ56545.1| putative fertility restorer [Oryza sativa Japonica Group]
gi|34015369|gb|AAQ56557.1| putative fertility restorer [Oryza sativa Japonica Group]
gi|35215067|dbj|BAC92425.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|113623463|dbj|BAF23408.1| Os08g0300700 [Oryza sativa Japonica Group]
gi|215678779|dbj|BAG95216.1| unnamed protein product [Oryza sativa Japonica Group]
gi|258644436|dbj|BAI39696.1| putative fertility restorer [Oryza sativa Indica Group]
Length = 735
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 47/97 (48%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I A C+ EE + G K K + V+ S++ C+TG +++ +M+K+
Sbjct: 323 LIDALCKREKVEEAQLFLGSLVKKGVKVNEVVYTSLIDGLCKTGKIDAADELMQKMISEG 382
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQ 97
PD +++ LI C++K A + DM KG Q
Sbjct: 383 FVPDAHSYSSLIDGLCRQKKLSQATLMLEDMMEKGIQ 419
Score = 41.2 bits (95), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 28/119 (23%), Positives = 50/119 (42%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I +C +G E ++ + +V ++ C++G +E M + ++ E
Sbjct: 218 LIDGYCNAGEMEHALKVFEGMDGNRCSPNVRTYTELIHGLCKSGKVERAMVLFSRMVEAG 277
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEA 119
+ P+ T+ LI+ C E A+R + M G P + S LI L K EA
Sbjct: 278 LEPNVVTYTALIQGQCNEGHLQCAFRLLHLMETNGLVPNDWTFSVLIDALCKREKVEEA 336
Score = 38.1 bits (87), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 22/79 (27%), Positives = 36/79 (45%)
Query: 29 DVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYMLAYRTM 88
++V+ N+++ YC G+ME + V +D SP+ T+ LI CK A
Sbjct: 211 NIVVYNALIDGYCNAGEMEHALKVFEGMDGNRCSPNVRTYTELIHGLCKSGKVERAMVLF 270
Query: 89 VDMHRKGHQPEEELCSSLI 107
M G +P ++LI
Sbjct: 271 SRMVEAGLEPNVVTYTALI 289
Score = 37.4 bits (85), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 25/125 (20%), Positives = 55/125 (44%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I R E K++ A D+V + +YC G ME ++ ++ +
Sbjct: 428 IIDELVREVGSEGPKKIFDKMIATGINPDIVTYTVFVRSYCEEGRMEDAESMIVQMVDRG 487
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ P+ T++ LI+ + + A+ T M KG +P E+ + L+ + K + ++
Sbjct: 488 VFPNLVTYNTLIRGYANLGLVSQAFSTFEVMVGKGWKPNEDSYTVLLRLVVKKSSSDNSV 547
Query: 121 SVYNM 125
++ +
Sbjct: 548 DIWKI 552
Score = 37.0 bits (84), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 29/121 (23%), Positives = 53/121 (43%), Gaps = 3/121 (2%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C+SG E L + +VV +++ C G ++ ++ ++
Sbjct: 253 LIHGLCKSGKVERAMVLFSRMVEAGLEPNVVTYTALIQGQCNEGHLQCAFRLLHLMETNG 312
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHL---GKMRAHS 117
+ P+ TF +LI CK + A + + +KG + E + +SLI L GK+ A
Sbjct: 313 LVPNDWTFSVLIDALCKREKVEEAQLFLGSLVKKGVKVNEVVYTSLIDGLCKTGKIDAAD 372
Query: 118 E 118
E
Sbjct: 373 E 373
>gi|224149779|ref|XP_002336862.1| predicted protein [Populus trichocarpa]
gi|222837029|gb|EEE75408.1| predicted protein [Populus trichocarpa]
Length = 370
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/128 (24%), Positives = 59/128 (46%), Gaps = 3/128 (2%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+IS CR E ++ + K++ DV++ +++ +CR G++ V ++
Sbjct: 223 LISILCRKRRASEAQEFFDSLKDKFEP-DVIVYTNLVRGWCRAGNISEAERVFGEMKVAG 281
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLI-FHLGKMRAHSEA 119
I P+ T+ I+I C+ A+ +M G QP +SL+ H+ R +
Sbjct: 282 IKPNVYTYSIVIDSLCRCGQITRAHDVFAEMLDAGCQPNSITYNSLMRIHVKAGRTE-KV 340
Query: 120 LSVYNMLR 127
L VYN ++
Sbjct: 341 LQVYNQMK 348
>gi|19071826|dbj|BAB85657.1| PnC401 homologue [Arabidopsis thaliana]
Length = 831
Score = 47.4 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 35/131 (26%), Positives = 59/131 (45%), Gaps = 4/131 (3%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+++A R F L E K D +L N+++ A +G+++ M + K+ E
Sbjct: 360 LVTALTRQKHFHSLLSLISKVEKNGLKPDTILFNAIINASSESGNLDQAMKIFEKMKESG 419
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGH--QPEEELCSSLIFHLGKMRAHSE 118
P +TF+ LIK + K + R ++DM + QP + C+ L+ R E
Sbjct: 420 CKPTASTFNTLIKGYGKIGKLEESSR-LLDMMLRDEMLQPNDRTCNILVQAWCNQRKIEE 478
Query: 119 ALS-VYNMLRY 128
A + VY M Y
Sbjct: 479 AWNIVYKMQSY 489
Score = 40.4 bits (93), Expect = 0.23, Method: Composition-based stats.
Identities = 25/99 (25%), Positives = 46/99 (46%), Gaps = 1/99 (1%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKL-DEL 59
+ + R+G E+ KQ+ + +VV+ ++ +C G+M+ M V +K+ +
Sbjct: 642 LAKGYARAGEPEKAKQILNQMRKFGVRPNVVIYTQIISGWCSAGEMKKAMQVYKKMCGIV 701
Query: 60 AISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQP 98
+SP+ T+ LI F + K A + DM K P
Sbjct: 702 GLSPNLTTYETLIWGFGEAKQPWKAEELLKDMEGKNVVP 740
Score = 37.0 bits (84), Expect = 2.9, Method: Composition-based stats.
Identities = 24/100 (24%), Positives = 45/100 (45%)
Query: 27 KYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYMLAYR 86
K DVV ++++ A+ GDM+ + + E I PD + F IL K + + A +
Sbjct: 598 KPDVVTFSTLMNAWSSVGDMKRCEEIYTDMLEGGIDPDIHAFSILAKGYARAGEPEKAKQ 657
Query: 87 TMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVYNML 126
+ M + G +P + + +I +A+ VY +
Sbjct: 658 ILNQMRKFGVRPNVVIYTQIISGWCSAGEMKKAMQVYKKM 697
>gi|29294052|gb|AAO73889.1| protein kinase family [Arabidopsis thaliana]
Length = 854
Score = 47.4 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 35/131 (26%), Positives = 59/131 (45%), Gaps = 4/131 (3%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+++A R F L E K D +L N+++ A +G+++ M + K+ E
Sbjct: 383 LVTALTRQKHFHSLLSLISKVEKNGLKPDTILFNAIINASSESGNLDQAMKIFEKMKESG 442
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGH--QPEEELCSSLIFHLGKMRAHSE 118
P +TF+ LIK + K + R ++DM + QP + C+ L+ R E
Sbjct: 443 CKPTASTFNTLIKGYGKIGKLEESSR-LLDMMLRDEMLQPNDRTCNILVQAWCNQRKIEE 501
Query: 119 ALS-VYNMLRY 128
A + VY M Y
Sbjct: 502 AWNIVYKMQSY 512
Score = 38.9 bits (89), Expect = 0.68, Method: Composition-based stats.
Identities = 24/99 (24%), Positives = 46/99 (46%), Gaps = 1/99 (1%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKL-DEL 59
+ + R+G E+ +Q+ + +VV+ ++ +C G+M+ M V +K+ +
Sbjct: 665 LAKGYARAGEPEKAEQILNQMRKFGVRPNVVIYTQIISGWCSAGEMKKAMQVYKKMCGIV 724
Query: 60 AISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQP 98
+SP+ T+ LI F + K A + DM K P
Sbjct: 725 GLSPNLTTYETLIWGFGEAKQPWKAEELLKDMEGKNVVP 763
Score = 36.6 bits (83), Expect = 3.1, Method: Composition-based stats.
Identities = 24/100 (24%), Positives = 45/100 (45%)
Query: 27 KYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYMLAYR 86
K DVV ++++ A+ GDM+ + + E I PD + F IL K + + A +
Sbjct: 621 KPDVVTFSTLMNAWSSVGDMKRCEEIYTDMLEGGIDPDIHAFSILAKGYARAGEPEKAEQ 680
Query: 87 TMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVYNML 126
+ M + G +P + + +I +A+ VY +
Sbjct: 681 ILNQMRKFGVRPNVVIYTQIISGWCSAGEMKKAMQVYKKM 720
>gi|42570531|ref|NP_850859.2| SNF1-like protein kinase [Arabidopsis thaliana]
gi|75160582|sp|Q8S9D1.1|PP395_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g21222; AltName: Full=SNF1-like protein kinase AtC401
gi|19071860|dbj|BAB85674.1| SNF1-like protein kinase [Arabidopsis thaliana]
gi|332005563|gb|AED92946.1| SNF1-like protein kinase [Arabidopsis thaliana]
Length = 831
Score = 47.4 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 35/131 (26%), Positives = 59/131 (45%), Gaps = 4/131 (3%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+++A R F L E K D +L N+++ A +G+++ M + K+ E
Sbjct: 360 LVTALTRQKHFHSLLSLISKVEKNGLKPDTILFNAIINASSESGNLDQAMKIFEKMKESG 419
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGH--QPEEELCSSLIFHLGKMRAHSE 118
P +TF+ LIK + K + R ++DM + QP + C+ L+ R E
Sbjct: 420 CKPTASTFNTLIKGYGKIGKLEESSR-LLDMMLRDEMLQPNDRTCNILVQAWCNQRKIEE 478
Query: 119 ALS-VYNMLRY 128
A + VY M Y
Sbjct: 479 AWNIVYKMQSY 489
Score = 38.9 bits (89), Expect = 0.68, Method: Composition-based stats.
Identities = 24/99 (24%), Positives = 46/99 (46%), Gaps = 1/99 (1%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKL-DEL 59
+ + R+G E+ +Q+ + +VV+ ++ +C G+M+ M V +K+ +
Sbjct: 642 LAKGYARAGEPEKAEQILNQMRKFGVRPNVVIYTQIISGWCSAGEMKKAMQVYKKMCGIV 701
Query: 60 AISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQP 98
+SP+ T+ LI F + K A + DM K P
Sbjct: 702 GLSPNLTTYETLIWGFGEAKQPWKAEELLKDMEGKNVVP 740
Score = 36.6 bits (83), Expect = 3.1, Method: Composition-based stats.
Identities = 24/100 (24%), Positives = 45/100 (45%)
Query: 27 KYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYMLAYR 86
K DVV ++++ A+ GDM+ + + E I PD + F IL K + + A +
Sbjct: 598 KPDVVTFSTLMNAWSSVGDMKRCEEIYTDMLEGGIDPDIHAFSILAKGYARAGEPEKAEQ 657
Query: 87 TMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVYNML 126
+ M + G +P + + +I +A+ VY +
Sbjct: 658 ILNQMRKFGVRPNVVIYTQIISGWCSAGEMKKAMQVYKKM 697
>gi|224068454|ref|XP_002326124.1| predicted protein [Populus trichocarpa]
gi|222833317|gb|EEE71794.1| predicted protein [Populus trichocarpa]
Length = 512
Score = 47.4 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 33/129 (25%), Positives = 59/129 (45%), Gaps = 1/129 (0%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I CR G + ++ D E+ DVV N+++ C+ +++ + +++ +
Sbjct: 184 LIRGLCRVGGVDRAFEVFKDMESFGCLPDVVTYNTLINGLCKANEVQRGCELFKEIQSRS 243
Query: 61 -ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEA 119
SPD T+ +I FCK A +M R G QP + LI GK+ +EA
Sbjct: 244 DCSPDIVTYTSIISGFCKSGKMKEASNLFEEMMRSGIQPNVITFNVLIDGFGKIGNIAEA 303
Query: 120 LSVYNMLRY 128
++Y + Y
Sbjct: 304 EAMYRKMAY 312
Score = 37.4 bits (85), Expect = 1.9, Method: Composition-based stats.
Identities = 28/125 (22%), Positives = 52/125 (41%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+A C+ E + G + + N ++ +C+ G+++ ++++++E
Sbjct: 360 LINALCKENRLNEARDFLGQIKNSSIIPKPFMYNPVIDGFCKAGNVDEGNVILKEMEEKR 419
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
PD TF ILI C + A M P+ +SLI L K +EA
Sbjct: 420 CDPDKVTFTILIIGHCVKGRMFEAINIFNRMLATRCAPDNITVNSLISCLLKAGMPNEAY 479
Query: 121 SVYNM 125
+ M
Sbjct: 480 RIRKM 484
Score = 37.0 bits (84), Expect = 2.8, Method: Composition-based stats.
Identities = 20/77 (25%), Positives = 37/77 (48%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+IS FC+SG +E L + + +V+ N ++ + + G++ + RK+
Sbjct: 255 IISGFCKSGKMKEASNLFEEMMRSGIQPNVITFNVLIDGFGKIGNIAEAEAMYRKMAYFD 314
Query: 61 ISPDYNTFHILIKYFCK 77
S D TF LI +C+
Sbjct: 315 CSADVVTFTSLIDGYCR 331
Score = 35.8 bits (81), Expect = 5.8, Method: Composition-based stats.
Identities = 23/112 (20%), Positives = 52/112 (46%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+++ ++ F+ K+L + + K + + + N++L + + +++ ++ +
Sbjct: 114 LVTWMAQASDFDMVKKLLAEVQGKEVRINSFVYNNLLSVLVKQNQVHEAIYLFKEYLVMQ 173
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGK 112
PD TF+ILI+ C+ A+ DM G P+ ++LI L K
Sbjct: 174 SPPDTWTFNILIRGLCRVGGVDRAFEVFKDMESFGCLPDVVTYNTLINGLCK 225
>gi|125561476|gb|EAZ06924.1| hypothetical protein OsI_29163 [Oryza sativa Indica Group]
Length = 687
Score = 47.4 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 23/82 (28%), Positives = 42/82 (51%)
Query: 31 VLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYMLAYRTMVD 90
V+ N+++ YC+TG++E ++ I PD+ T++ LI CK + A +++
Sbjct: 372 VIYNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLME 431
Query: 91 MHRKGHQPEEELCSSLIFHLGK 112
M G P E ++LI G+
Sbjct: 432 MQDNGVNPTVETFNTLIDAYGR 453
Score = 41.2 bits (95), Expect = 0.13, Method: Composition-based stats.
Identities = 36/173 (20%), Positives = 77/173 (44%), Gaps = 22/173 (12%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ C++ + L + + V N+++ AY RTG +E V+ ++ E
Sbjct: 412 LINGLCKAERITNAQDLLMEMQDNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENG 471
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLI------------- 107
+ P+ ++ ++ FCK A + DM K P ++ +++I
Sbjct: 472 LKPNVVSYGSIVNAFCKNGKIPEAVAILDDMFHKDVLPNAQVYNAIIDAYVEHGPNDQAF 531
Query: 108 FHLGKMRAH--SEALSVYNMLRYSKRSMCKALH----EKILHILISGKLLKDA 154
+ KM+++ S ++ YN+L + +C E+I++ L + +L+ DA
Sbjct: 532 ILVEKMKSNGISPSIVTYNLL---IKGLCNQSQISEAEEIINSLSNHRLIPDA 581
Score = 39.3 bits (90), Expect = 0.53, Method: Composition-based stats.
Identities = 17/98 (17%), Positives = 47/98 (47%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ +C++G E G ++++ K D + N+++ C+ + + ++ ++ +
Sbjct: 377 LINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQDNG 436
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQP 98
++P TF+ LI + + + + +M G +P
Sbjct: 437 VNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKP 474
>gi|297844892|ref|XP_002890327.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297336169|gb|EFH66586.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 903
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/108 (26%), Positives = 55/108 (50%), Gaps = 1/108 (0%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYD-KYDVVLLNSMLCAYCRTGDMESVMHVMRKLDEL 59
+++A+CR G ++ A + + + +VV NS++ Y GD+E + V+R + E
Sbjct: 231 VVNAYCRCGKVDKAMAFAKEMDNSLGLELNVVTCNSLINGYAMIGDVEGMTRVLRLMSER 290
Query: 60 AISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLI 107
+S + TF LIK +CK+ + A + + K P++ + LI
Sbjct: 291 GVSRNVVTFTSLIKSYCKKGLMEEAEQVFELVTEKKLVPDQHMHGVLI 338
Score = 42.4 bits (98), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 23/126 (18%), Positives = 62/126 (49%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I +CR+G + ++ + + + NS++ YC++G + ++ ++++ +
Sbjct: 337 LIDGYCRNGRICDAVRVHDYMIEMGVRTNTTICNSLINGYCKSGQLVEAEQILTRMNDWS 396
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ PD++T++ L+ +C+ A + M +K P + L+ ++ A + L
Sbjct: 397 LKPDHHTYNTLVDGYCRAGHVDEALKLCGRMCQKEVVPTVMTYNILLKGYSRIGAFHDVL 456
Query: 121 SVYNML 126
S++ M+
Sbjct: 457 SLWKMM 462
>gi|115476328|ref|NP_001061760.1| Os08g0402600 [Oryza sativa Japonica Group]
gi|113623729|dbj|BAF23674.1| Os08g0402600, partial [Oryza sativa Japonica Group]
Length = 554
Score = 47.4 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 23/82 (28%), Positives = 42/82 (51%)
Query: 31 VLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYMLAYRTMVD 90
V+ N+++ YC+TG++E ++ I PD+ T++ LI CK + A +++
Sbjct: 239 VIYNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLME 298
Query: 91 MHRKGHQPEEELCSSLIFHLGK 112
M G P E ++LI G+
Sbjct: 299 MQDNGVNPTVETFNTLIDAYGR 320
Score = 41.2 bits (95), Expect = 0.13, Method: Composition-based stats.
Identities = 36/173 (20%), Positives = 77/173 (44%), Gaps = 22/173 (12%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ C++ + L + + V N+++ AY RTG +E V+ ++ E
Sbjct: 279 LINGLCKAERITNAQDLLMEMQDNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENG 338
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLI------------- 107
+ P+ ++ ++ FCK A + DM K P ++ +++I
Sbjct: 339 LKPNVVSYGSIVNAFCKNGKIPEAVAILDDMFHKDVLPNAQVYNAIIDAYVEHGPNDQAF 398
Query: 108 FHLGKMRAH--SEALSVYNMLRYSKRSMCKALH----EKILHILISGKLLKDA 154
+ KM+++ S ++ YN+L + +C E+I++ L + +L+ DA
Sbjct: 399 ILVEKMKSNGISPSIVTYNLL---IKGLCNQSQISEAEEIINSLSNHRLIPDA 448
Score = 39.3 bits (90), Expect = 0.55, Method: Composition-based stats.
Identities = 17/98 (17%), Positives = 47/98 (47%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ +C++G E G ++++ K D + N+++ C+ + + ++ ++ +
Sbjct: 244 LINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQDNG 303
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQP 98
++P TF+ LI + + + + +M G +P
Sbjct: 304 VNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKP 341
>gi|37572999|dbj|BAC98691.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
gi|222640519|gb|EEE68651.1| hypothetical protein OsJ_27230 [Oryza sativa Japonica Group]
Length = 691
Score = 47.4 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 23/82 (28%), Positives = 42/82 (51%)
Query: 31 VLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYMLAYRTMVD 90
V+ N+++ YC+TG++E ++ I PD+ T++ LI CK + A +++
Sbjct: 376 VIYNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLME 435
Query: 91 MHRKGHQPEEELCSSLIFHLGK 112
M G P E ++LI G+
Sbjct: 436 MQDNGVNPTVETFNTLIDAYGR 457
Score = 41.2 bits (95), Expect = 0.13, Method: Composition-based stats.
Identities = 36/173 (20%), Positives = 77/173 (44%), Gaps = 22/173 (12%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ C++ + L + + V N+++ AY RTG +E V+ ++ E
Sbjct: 416 LINGLCKAERITNAQDLLMEMQDNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENG 475
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLI------------- 107
+ P+ ++ ++ FCK A + DM K P ++ +++I
Sbjct: 476 LKPNVVSYGSIVNAFCKNGKIPEAVAILDDMFHKDVLPNAQVYNAIIDAYVEHGPNDQAF 535
Query: 108 FHLGKMRAH--SEALSVYNMLRYSKRSMCKALH----EKILHILISGKLLKDA 154
+ KM+++ S ++ YN+L + +C E+I++ L + +L+ DA
Sbjct: 536 ILVEKMKSNGISPSIVTYNLL---IKGLCNQSQISEAEEIINSLSNHRLIPDA 585
Score = 39.3 bits (90), Expect = 0.55, Method: Composition-based stats.
Identities = 17/98 (17%), Positives = 47/98 (47%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ +C++G E G ++++ K D + N+++ C+ + + ++ ++ +
Sbjct: 381 LINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQDNG 440
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQP 98
++P TF+ LI + + + + +M G +P
Sbjct: 441 VNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKP 478
>gi|356532720|ref|XP_003534919.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At3g22470, mitochondrial-like [Glycine max]
Length = 468
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/128 (28%), Positives = 59/128 (46%), Gaps = 7/128 (5%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C+ E L + +A+ +V+ N+++CA+C G + ++ ++
Sbjct: 156 IIDGLCKDKLVNEAYDLYSEMDAREIFPNVITYNTLICAFCLAGQLMGAFSLLHEMILKN 215
Query: 61 ISPDYNTFHILIKYFCKE-KMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEA 119
I+PD TF ILI CKE K + MV M G P + +I L K + EA
Sbjct: 216 INPDVYTFSILIDALCKEGKNAKQIFHAMVQM---GVNPNVYSYNIMINGLCKCKRVDEA 272
Query: 120 LSVYNMLR 127
+ N+LR
Sbjct: 273 M---NLLR 277
Score = 39.7 bits (91), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 29/123 (23%), Positives = 56/123 (45%), Gaps = 2/123 (1%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I A C+ G + KQ+ +V N M+ C+ ++ M+++R++
Sbjct: 226 LIDALCKEG--KNAKQIFHAMVQMGVNPNVYSYNIMINGLCKCKRVDEAMNLLREMLHKN 283
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ PD T++ LI CK A M +MH +G + +SL+ L K + +A
Sbjct: 284 MVPDTVTYNSLIDGLCKSGRITSALNLMNEMHHRGQPADVVTYTSLLDALCKNQNLDKAT 343
Query: 121 SVY 123
+++
Sbjct: 344 ALF 346
Score = 39.7 bits (91), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 29/121 (23%), Positives = 53/121 (43%), Gaps = 3/121 (2%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
MI+ C+ +E L + K D V NS++ C++G + S +++M ++
Sbjct: 259 MINGLCKCKRVDEAMNLLREMLHKNMVPDTVTYNSLIDGLCKSGRITSALNLMNEMHHRG 318
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHL---GKMRAHS 117
D T+ L+ CK + A + M +G QP ++LI L G+++
Sbjct: 319 QPADVVTYTSLLDALCKNQNLDKATALFMKMKERGIQPTMYTYTALIDGLCKGGRLKNAQ 378
Query: 118 E 118
E
Sbjct: 379 E 379
>gi|357467093|ref|XP_003603831.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355492879|gb|AES74082.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 530
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/142 (26%), Positives = 61/142 (42%), Gaps = 16/142 (11%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+IS+ C+ E + + K++ DV++ S++ +CR GD+ V + E
Sbjct: 219 VISSLCKKRRASEAELFFDSLKHKFEP-DVIVYTSLVHGWCRAGDIAKAEEVFSDMKEAG 277
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEA- 119
+ P+ T+ I+I C+ A+ +M G P +SL MR H +A
Sbjct: 278 VKPNVYTYSIVIDSLCRCGQITRAHDVFSEMIDAGCDPNAVTFNSL------MRVHVKAG 331
Query: 120 -----LSVYNMLRYSKRSMCKA 136
L VYN + KR C A
Sbjct: 332 RTEKVLQVYNQM---KRLGCAA 350
Score = 38.1 bits (87), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 25/107 (23%), Positives = 50/107 (46%), Gaps = 2/107 (1%)
Query: 1 MISAFCRSGCFEETKQLAGD-FEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDEL 59
+I + CR G + + +A D + V NS++ + + G E V+ V ++ L
Sbjct: 288 VIDSLCRCGQITRAHDVFSEMIDAGCDP-NAVTFNSLMRVHVKAGRTEKVLQVYNQMKRL 346
Query: 60 AISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSL 106
+ D +++ LI+ CK++ A + + M +KG P +S+
Sbjct: 347 GCAADTISYNFLIESHCKDENLDEAVKVLDTMVKKGVAPNASTFNSI 393
Score = 37.4 bits (85), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 23/94 (24%), Positives = 49/94 (52%), Gaps = 4/94 (4%)
Query: 29 DVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYMLAYRTM 88
+ + N ++ + + ++ V+ + +++DE + P+ NT+ ILI FC++ + AY M
Sbjct: 421 NTLTYNILMRMFADSKSIDMVLKLKKEMDESEVEPNVNTYRILILMFCEKGHWNNAYNLM 480
Query: 89 VDM-HRKGHQPE---EELCSSLIFHLGKMRAHSE 118
+M K +P E L+ + G+++ H E
Sbjct: 481 KEMVEEKCLKPNLSIYETVLELLRNAGQLKKHEE 514
>gi|356558306|ref|XP_003547448.1| PREDICTED: pentatricopeptide repeat-containing protein At5g57250,
mitochondrial-like [Glycine max]
Length = 1064
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/124 (22%), Positives = 55/124 (44%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C+ G + L E K ++V+ NS++ C G + ++ +++L
Sbjct: 716 VIDGLCKGGYLNKALDLCAFVEKKGMNLNIVIYNSIINGLCHEGRLIEAFRLLDSIEKLN 775
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ P T+ +I C+E + A M KG QP+ ++ +SL+ + K +A
Sbjct: 776 LVPSEITYATVIYALCREGFLLDAEHVFSKMVLKGFQPKVQVYNSLLDGISKFGQLEKAF 835
Query: 121 SVYN 124
+ N
Sbjct: 836 ELLN 839
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/148 (25%), Positives = 65/148 (43%), Gaps = 4/148 (2%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ A C+ G E L E + DVVL ++ C Y + V MR++ E
Sbjct: 201 LVGALCKMGRVGEVCGLVQWMEREGLGLDVVLYSAWACGYVEERVLGEVFGRMREMVEKG 260
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
I D+ ++ +L+ F K ++ + M ++GH+P + S+++ K EA
Sbjct: 261 IGHDFVSYTVLVDGFSKLGDVEKSFTFLAKMIKEGHRPNKVTYSAIMSAYCKKGKVEEAF 320
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISG 148
V+ S + + L E + ILI G
Sbjct: 321 GVFE----SMKDLGIDLDEYVFVILIDG 344
Score = 43.5 bits (101), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 21/76 (27%), Positives = 38/76 (50%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ + G E+ +L D E KY + D + +++++ YC+ GDM + K
Sbjct: 821 LLDGISKFGQLEKAFELLNDMETKYIEPDSLTISAVINCYCQKGDMHGALEFYYKFKRKD 880
Query: 61 ISPDYNTFHILIKYFC 76
+SPD+ F LI+ C
Sbjct: 881 MSPDFFGFLYLIRGLC 896
Score = 37.0 bits (84), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 27/119 (22%), Positives = 51/119 (42%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ F + G E++ + + + V ++++ AYC+ G +E V + +L
Sbjct: 271 LVDGFSKLGDVEKSFTFLAKMIKEGHRPNKVTYSAIMSAYCKKGKVEEAFGVFESMKDLG 330
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEA 119
I D F ILI F + + + +M R G P ++++ L K SEA
Sbjct: 331 IDLDEYVFVILIDGFGRIGDFDKVFCLFDEMERSGISPSVVAYNAVMNGLSKHGRTSEA 389
Score = 35.4 bits (80), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 27/110 (24%), Positives = 46/110 (41%), Gaps = 1/110 (0%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
MI +C+ G EE ++ +F K + NS++ C+ G E + + +L+
Sbjct: 476 MIDGYCKVGRIEEALEVFDEFR-KTLISSLACYNSIINGLCKNGMTEMAIEALLELNHEG 534
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHL 110
+ D TF +L K +E A + M G +C+ IF L
Sbjct: 535 LELDIGTFRMLTKTIFEENNTKKALDLVYRMEGLGPDIYSSVCNDSIFLL 584
>gi|11079485|gb|AAG29197.1|AC078898_7 hypothetical protein [Arabidopsis thaliana]
Length = 441
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/122 (25%), Positives = 55/122 (45%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++S+ R G EE K+L + D+ N+++ YC+ G + + L +
Sbjct: 126 LLSSLARFGLVEEMKRLYTEMLEDLVSPDIYTFNTLVNGYCKLGYVVEAKQYVTWLIQAG 185
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
PDY T+ I C+ K A++ +M + G E + LI+ L + + EAL
Sbjct: 186 CDPDYFTYTSFITGHCRRKEVDAAFKVFKEMTQNGCHRNEVSYTQLIYGLFEAKKIDEAL 245
Query: 121 SV 122
S+
Sbjct: 246 SL 247
>gi|357500143|ref|XP_003620360.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355495375|gb|AES76578.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 426
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/131 (22%), Positives = 65/131 (49%)
Query: 29 DVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYMLAYRTM 88
DVV N+++ +C G +E + + ++ I P+ +F+ILI CKE +
Sbjct: 135 DVVTYNTLIYGFCIVGQLEDAIRLFNEMRLKNIVPNVCSFNILIDGLCKEGDVKGGKSVL 194
Query: 89 VDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVYNMLRYSKRSMCKALHEKILHILISG 148
M ++ +P+ CSSLI ++ ++A ++N + + ++ + +++ L
Sbjct: 195 AVMIKQSVKPDVVTCSSLIDGYFLVKKANKARYIFNAMAQNGVTIDLRSYNIMINGLSKA 254
Query: 149 KLLKDAYIVVK 159
K++ +A I+ K
Sbjct: 255 KMVDEAVILFK 265
Score = 43.5 bits (101), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 32/145 (22%), Positives = 62/145 (42%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C+ G + K + + K DVV +S++ Y ++ + +
Sbjct: 177 LIDGLCKEGDVKGGKSVLAVMIKQSVKPDVVTCSSLIDGYFLVKKANKARYIFNAMAQNG 236
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
++ D +++I+I K KM A +M K P+ S+LI LGK+ S
Sbjct: 237 VTIDLRSYNIMINGLSKAKMVDEAVILFKEMQFKSMTPDTITYSTLIDGLGKLGRISYVW 296
Query: 121 SVYNMLRYSKRSMCKALHEKILHIL 145
+ + +R + RS + +L++L
Sbjct: 297 DLIDEMRATGRSANVITYSSLLNVL 321
Score = 38.5 bits (88), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 25/119 (21%), Positives = 51/119 (42%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I + G L + A +V+ +S+L C++G ++ + + K+ +
Sbjct: 282 LIDGLGKLGRISYVWDLIDEMRATGRSANVITYSSLLNVLCKSGHFDTAIRIFTKIKDKG 341
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEA 119
P+ T++IL+ CK A D+ KG++ + L + +I L + EA
Sbjct: 342 FEPNMVTYNILVDGLCKNGRLKDAQEIFHDLLIKGYRLDVRLYTVMINGLCREALFDEA 400
>gi|115434588|ref|NP_001042052.1| Os01g0153200 [Oryza sativa Japonica Group]
gi|113531583|dbj|BAF03966.1| Os01g0153200 [Oryza sativa Japonica Group]
Length = 1139
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/121 (26%), Positives = 54/121 (44%)
Query: 2 ISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAI 61
I A+C S + + L E++ K V N ++ C+ ++ + V + + +
Sbjct: 205 IRAYCESRNLDGARGLVVRMESEGVKASAVPYNVLMYGLCKNMRVQEAVEVKNVMVNIGV 264
Query: 62 SPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEALS 121
+ D T+ L+ FC+ + +A R DM R G P E CS +I L K EA S
Sbjct: 265 TADEVTYRTLVYGFCRMEELEMALRITHDMIRLGFVPSEANCSFMIDELRKKELVEEAFS 324
Query: 122 V 122
+
Sbjct: 325 L 325
Score = 44.7 bits (104), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 26/100 (26%), Positives = 43/100 (43%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ +C+ G + + L + + ++ CR GD+ S M + R++ E
Sbjct: 414 LINGYCKQGSLDRARGLLSGMVKEGLTPTAASYSPLIAGLCRNGDLSSCMELHREMAERG 473
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEE 100
I+ + TF LI FCK+K A R M P E
Sbjct: 474 IAWNNYTFTALINGFCKDKKMDEAARLFDKMIDSNVIPNE 513
Score = 38.9 bits (89), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 31/128 (24%), Positives = 53/128 (41%), Gaps = 10/128 (7%)
Query: 10 CFEETKQLAGDFEAKYDKYD---------VVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
CF + GD E D + +V N ++ C+ G ++ + +M K+ E
Sbjct: 728 CFLDYFATEGDMEKAKDLHSAMLQGHLASIVSFNILIKGLCKAGKIQEAIDLMSKITESG 787
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
SPD ++ +I CK A+ +M KG +P+ + I +AL
Sbjct: 788 FSPDCISYSTIIHELCKMGDINKAFELWNEMLYKGLKPDVVAYNIFIRWCNVHGESDKAL 847
Query: 121 SVY-NMLR 127
+Y NM+R
Sbjct: 848 GIYTNMIR 855
Score = 35.8 bits (81), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 21/110 (19%), Positives = 49/110 (44%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ CR+G +L + + ++ +++ +C+ M+ + K+ +
Sbjct: 449 LIAGLCRNGDLSSCMELHREMAERGIAWNNYTFTALINGFCKDKKMDEAARLFDKMIDSN 508
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHL 110
+ P+ TF+++I+ +C A++ M G +P+ SLI L
Sbjct: 509 VIPNEVTFNVMIEGYCLVGNIRKAFQLYDQMVEMGLKPDNYTYRSLISGL 558
>gi|356561677|ref|XP_003549106.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g62910-like [Glycine max]
Length = 511
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/127 (24%), Positives = 59/127 (46%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C G ++ A+ + D V +++ C+TG+ ++V ++RKL+ +
Sbjct: 133 LIKGLCFRGEIKKALYFHDQLVAQGFQLDQVSYGTLINGLCKTGETKAVARLLRKLEGHS 192
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ PD ++ +I CK K+ A +M KG P+ ++LI M EA
Sbjct: 193 VKPDVVMYNTIINSLCKNKLLGDACDVYSEMIVKGISPDVVTYTTLIHGFCIMGHLKEAF 252
Query: 121 SVYNMLR 127
S+ N ++
Sbjct: 253 SLLNEMK 259
Score = 40.8 bits (94), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 30/122 (24%), Positives = 53/122 (43%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
MI+ C++ +E L + + K D+V NS++ C+ +E + + +++ E
Sbjct: 343 MINGLCKTKMVDEAMSLFEEMKHKNMIPDIVTYNSLIDGLCKNHHLERAIALCKRMKEQG 402
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
I PD ++ IL+ CK A + KG+ + LI L K EAL
Sbjct: 403 IQPDVYSYTILLDGLCKSGRLEDAKEIFQRLLAKGYHLNVHAYTVLINRLCKAGFFDEAL 462
Query: 121 SV 122
+
Sbjct: 463 DL 464
Score = 39.7 bits (91), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 31/119 (26%), Positives = 51/119 (42%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ C++G + +L E K DVV+ N+++ + C+ + V ++
Sbjct: 168 LINGLCKTGETKAVARLLRKLEGHSVKPDVVMYNTIINSLCKNKLLGDACDVYSEMIVKG 227
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEA 119
ISPD T+ LI FC A+ + +M K P + LI L K EA
Sbjct: 228 ISPDVVTYTTLIHGFCIMGHLKEAFSLLNEMKLKNINPNVCTFNILIDALSKEGKMKEA 286
Score = 39.3 bits (90), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 18/75 (24%), Positives = 36/75 (48%)
Query: 33 LNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYMLAYRTMVDMH 92
N++L + +V+ + ++ + I+PD T ILI FC + LA+ ++
Sbjct: 60 FNNILSSLVNNKHYPTVISLFKQFEPNGITPDLCTLSILINCFCHQAHITLAFSVFANIL 119
Query: 93 RKGHQPEEELCSSLI 107
++G P ++LI
Sbjct: 120 KRGFHPNAITLNTLI 134
Score = 35.4 bits (80), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 27/107 (25%), Positives = 45/107 (42%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I A + G +E K L K DV NS++ Y +++ +V + +
Sbjct: 273 LIDALSKEGKMKEAKILLAVMMKACIKPDVFTYNSLIDGYFLVDEVKHAKYVFYSMAQRG 332
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLI 107
++PD + +I CK KM A +M K P+ +SLI
Sbjct: 333 VTPDVQCYTNMINGLCKTKMVDEAMSLFEEMKHKNMIPDIVTYNSLI 379
>gi|296083865|emb|CBI24253.3| unnamed protein product [Vitis vinifera]
Length = 582
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 44/98 (44%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+IS FC +G + K+L + K +VV + ++ CR G + V+ + E
Sbjct: 109 LISGFCNNGNLDRGKELFDEMLGKGISANVVTYSCLVHGLCRLGQWKEANTVLNAMAEHG 168
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQP 98
I PD T+ LI CK+ A + M KG +P
Sbjct: 169 IHPDVVTYTGLIDGLCKDGRATHAMDLLNLMVEKGEEP 206
Score = 45.8 bits (107), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 47/95 (49%)
Query: 33 LNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYMLAYRTMVDMH 92
+N +L CR G + M ++R++ ++SPD +++ LI CK K A +++M
Sbjct: 1 MNIVLKGLCRNGGVFEAMGLIREMGRKSVSPDIVSYNTLINGLCKAKKLKEAVGLLLEME 60
Query: 93 RKGHQPEEELCSSLIFHLGKMRAHSEALSVYNMLR 127
G P C++L+ L K EA+ + ++
Sbjct: 61 AAGCFPNSVTCTTLMDGLCKDGRMDEAMELLEAMK 95
Score = 44.3 bits (103), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 29/126 (23%), Positives = 55/126 (43%), Gaps = 3/126 (2%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++++ C+ G E+ K L + + D++ N+M+ + GD + V + K+ E+
Sbjct: 391 LMASLCKEGSLEQAKSLFQEMGNANCEPDIISFNTMIDGTLKAGDFQFVKELQMKMVEMG 450
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ PD TF LI K A + M G P+ + SL L + + +
Sbjct: 451 LRPDALTFSTLINRLSKLGELDEAKSALERMVASGFTPDALVYDSL---LKGLSSKGDTT 507
Query: 121 SVYNML 126
+ N+L
Sbjct: 508 EIINLL 513
Score = 43.1 bits (100), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 31/159 (19%), Positives = 67/159 (42%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ C+ G +E +L + K DVVL +++ +C G+++ + ++
Sbjct: 74 LMDGLCKDGRMDEAMELLEAMKKKGFDADVVLYGTLISGFCNNGNLDRGKELFDEMLGKG 133
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
IS + T+ L+ C+ + A + M G P+ + LI L K + A+
Sbjct: 134 ISANVVTYSCLVHGLCRLGQWKEANTVLNAMAEHGIHPDVVTYTGLIDGLCKDGRATHAM 193
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLKDAYIVVK 159
+ N++ + +L L L+ DA+ +++
Sbjct: 194 DLLNLMVEKGEEPSNVTYNVLLSGLCKEGLVIDAFKILR 232
Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 27/124 (21%), Positives = 54/124 (43%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ CR G ++E + DVV ++ C+ G M ++ + E
Sbjct: 144 LVHGLCRLGQWKEANTVLNAMAEHGIHPDVVTYTGLIDGLCKDGRATHAMDLLNLMVEKG 203
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
P T+++L+ CKE + + A++ + M KG + + ++L+ L EAL
Sbjct: 204 EEPSNVTYNVLLSGLCKEGLVIDAFKILRMMIEKGKKADVVTYNTLMKGLCDKGKVDEAL 263
Query: 121 SVYN 124
++N
Sbjct: 264 KLFN 267
Score = 40.8 bits (94), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 23/98 (23%), Positives = 44/98 (44%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C+ G + ++ K ++V N +L + G ++ M + +++ +L
Sbjct: 286 LIGGLCKEGRLTKAVKIHRKMVKKGSCGNLVTYNMLLGGCLKAGKIKEAMELWKQVLDLG 345
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQP 98
P+ T+ ILI FCK +M +A +M G P
Sbjct: 346 FVPNSFTYSILIDGFCKMRMLNIAKGLFCEMRTHGLNP 383
Score = 38.5 bits (88), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 24/97 (24%), Positives = 45/97 (46%), Gaps = 2/97 (2%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKL--DE 58
++S C+ G + ++ K K DVV N+++ C G ++ + + + +E
Sbjct: 214 LLSGLCKEGLVIDAFKILRMMIEKGKKADVVTYNTLMKGLCDKGKVDEALKLFNSMFDNE 273
Query: 59 LAISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKG 95
+ P+ TF++LI CKE A + M +KG
Sbjct: 274 NCLEPNVFTFNMLIGGLCKEGRLTKAVKIHRKMVKKG 310
>gi|297610360|ref|NP_001064440.2| Os10g0363500 [Oryza sativa Japonica Group]
gi|110288965|gb|AAP53322.2| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|255679339|dbj|BAF26354.2| Os10g0363500 [Oryza sativa Japonica Group]
Length = 512
Score = 47.4 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 22/70 (31%), Positives = 38/70 (54%)
Query: 29 DVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYMLAYRTM 88
D+V N+++ C G M+ V H++R+LD + P+ +TF LI +CK + A + +
Sbjct: 355 DIVTYNALILGLCNEGKMKKVEHLLRELDRAKLEPNASTFSALIVGWCKMQNSERALQLL 414
Query: 89 VDMHRKGHQP 98
M + G P
Sbjct: 415 NVMKKSGFHP 424
Score = 41.2 bits (95), Expect = 0.16, Method: Composition-based stats.
Identities = 23/78 (29%), Positives = 39/78 (50%), Gaps = 1/78 (1%)
Query: 31 VLLNSMLCAYCRTG-DMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYMLAYRTMV 89
V N+++ AYCR G D + + K+++ + PD T+ +I CKE A + +
Sbjct: 251 VSFNTLIAAYCRDGVDAGPALQLKMKMEQEGLVPDVVTYDTIIHGLCKEGRMGKANQVLS 310
Query: 90 DMHRKGHQPEEELCSSLI 107
+M KG P ++LI
Sbjct: 311 EMRVKGVMPNTVTYNTLI 328
Score = 40.8 bits (94), Expect = 0.19, Method: Composition-based stats.
Identities = 22/114 (19%), Positives = 51/114 (44%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C G ++ + L + + + + ++++ +C+ + E + ++ + +
Sbjct: 362 LILGLCNEGKMKKVEHLLRELDRAKLEPNASTFSALIVGWCKMQNSERALQLLNVMKKSG 421
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMR 114
P+Y T+ ++I FCK K A M DM + P++ L + L K +
Sbjct: 422 FHPNYTTYKMVISSFCKNKDLEGAVDVMGDMLGRCIAPDKALLNEFFDGLWKAK 475
Score = 39.3 bits (90), Expect = 0.61, Method: Composition-based stats.
Identities = 28/129 (21%), Positives = 53/129 (41%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C+ G + Q+ + K + V N+++ Y GD V ++ +
Sbjct: 292 IIHGLCKEGRMGKANQVLSEMRVKGVMPNTVTYNTLIHGYVALGDNAMAGRVHEEMVKNR 351
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ D T++ LI C E + ++ R +P S+LI KM+ AL
Sbjct: 352 VELDIVTYNALILGLCNEGKMKKVEHLLRELDRAKLEPNASTFSALIVGWCKMQNSERAL 411
Query: 121 SVYNMLRYS 129
+ N+++ S
Sbjct: 412 QLLNVMKKS 420
>gi|356522522|ref|XP_003529895.1| PREDICTED: pentatricopeptide repeat-containing protein At4g01030,
mitochondrial-like [Glycine max]
Length = 911
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/107 (22%), Positives = 52/107 (48%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+IS + G F+ ++L + + K D+V NS++ Y +G E + V+ ++ L
Sbjct: 440 LISGYTYKGLFDNAEKLLIQMKEEGIKADLVTWNSLVSGYSMSGCSEEALAVINRIKSLG 499
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLI 107
++P+ ++ +I C+ + Y A + M + +P S+L+
Sbjct: 500 LTPNVVSWTAMISGCCQNENYTDALQFFSQMQEENVKPNSTTISTLL 546
Score = 38.9 bits (89), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 18/64 (28%), Positives = 31/64 (48%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+IS++ +GC L + E+ K D++ NS+L + G E+V+ +R L
Sbjct: 304 IISSYAVNGCLNGAWDLFREMESSSIKPDIITWNSLLSGHLLQGSYENVLTNIRSLQSAG 363
Query: 61 ISPD 64
PD
Sbjct: 364 FKPD 367
>gi|168049795|ref|XP_001777347.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162671323|gb|EDQ57877.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 621
Score = 47.4 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 31/127 (24%), Positives = 61/127 (48%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+++A ++G EE + L + +A DVV + ++ + R G E+ + V+ ++
Sbjct: 15 LLNALAKAGQCEEAQLLFEELKAAKWTPDVVSYSCLINSLGRAGKWEAALEVVAEMQAKG 74
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
P+ T++ L+ K + A R + +M G P+ + LI LGK SEA
Sbjct: 75 CKPNLWTYNTLVDCLGKAGQFDEALRLLAEMRDNGCVPDVRTYNCLISTLGKAGRLSEAF 134
Query: 121 SVYNMLR 127
+++ +R
Sbjct: 135 TLFAEMR 141
Score = 45.4 bits (106), Expect = 0.008, Method: Composition-based stats.
Identities = 26/122 (21%), Positives = 60/122 (49%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I++ R+G +E ++ + +AK K ++ N+++ + G + + ++ ++ +
Sbjct: 50 LINSLGRAGKWEAALEVVAEMQAKGCKPNLWTYNTLVDCLGKAGQFDEALRLLAEMRDNG 109
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
PD T++ LI K A+ +M +G P+ +SLI+ LGK+ +A+
Sbjct: 110 CVPDVRTYNCLISTLGKAGRLSEAFTLFAEMRERGCVPDTFTYNSLIYGLGKVGRSQKAM 169
Query: 121 SV 122
+
Sbjct: 170 EL 171
Score = 44.3 bits (103), Expect = 0.018, Method: Composition-based stats.
Identities = 27/127 (21%), Positives = 58/127 (45%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+IS ++G E L + + D NS++ + G + M ++ +++
Sbjct: 120 LISTLGKAGRLSEAFTLFAEMRERGCVPDTFTYNSLIYGLGKVGRSQKAMELLEEMERHG 179
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
PD T+ LI K+ + A++ +M R+G +P+ ++L+ LGK +AL
Sbjct: 180 CPPDVMTYSSLITGLGKDGETVKAFKLFQEMKRRGRKPDSITFTALMDALGKAGRVDDAL 239
Query: 121 SVYNMLR 127
+ + ++
Sbjct: 240 ELLDEMK 246
Score = 42.0 bits (97), Expect = 0.085, Method: Composition-based stats.
Identities = 29/112 (25%), Positives = 50/112 (44%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ F + G E L + + K DVV + ++ + ++ V++K+++
Sbjct: 260 LIAGFGKVGDLVEAYNLLDEMKRNGCKPDVVTYSCLITGLIKASQLDEACQVLKKMEKEG 319
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGK 112
PD T++ LI K + A R M KG P+ S+LI LGK
Sbjct: 320 CPPDTITYNTLINGLGKAGLLNDAGRLFDRMKSKGCNPDVVTYSTLITALGK 371
Score = 39.7 bits (91), Expect = 0.42, Method: Composition-based stats.
Identities = 25/127 (19%), Positives = 61/127 (48%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ A ++G ++ +L + + + K VV N+++ + + GD+ +++ ++
Sbjct: 225 LMDALGKAGRVDDALELLDEMKERGVKPGVVTYNALIAGFGKVGDLVEAYNLLDEMKRNG 284
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
PD T+ LI K A + + M ++G P+ ++LI LGK ++A
Sbjct: 285 CKPDVVTYSCLITGLIKASQLDEACQVLKKMEKEGCPPDTITYNTLINGLGKAGLLNDAG 344
Query: 121 SVYNMLR 127
+++ ++
Sbjct: 345 RLFDRMK 351
Score = 39.3 bits (90), Expect = 0.52, Method: Composition-based stats.
Identities = 26/99 (26%), Positives = 44/99 (44%)
Query: 29 DVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYMLAYRTM 88
+VV NS+L A + G E + +L +PD ++ LI + + A +
Sbjct: 8 NVVTYNSLLNALAKAGQCEEAQLLFEELKAAKWTPDVVSYSCLINSLGRAGKWEAALEVV 67
Query: 89 VDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVYNMLR 127
+M KG +P ++L+ LGK EAL + +R
Sbjct: 68 AEMQAKGCKPNLWTYNTLVDCLGKAGQFDEALRLLAEMR 106
Score = 38.5 bits (88), Expect = 0.96, Method: Composition-based stats.
Identities = 28/122 (22%), Positives = 56/122 (45%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ + G + +L + + + K D + +++ A + G ++ + ++ ++ E
Sbjct: 190 LITGLGKDGETVKAFKLFQEMKRRGRKPDSITFTALMDALGKAGRVDDALELLDEMKERG 249
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ P T++ LI F K + AY + +M R G +P+ S LI L K EA
Sbjct: 250 VKPGVVTYNALIAGFGKVGDLVEAYNLLDEMKRNGCKPDVVTYSCLITGLIKASQLDEAC 309
Query: 121 SV 122
V
Sbjct: 310 QV 311
Score = 38.5 bits (88), Expect = 1.1, Method: Composition-based stats.
Identities = 33/154 (21%), Positives = 68/154 (44%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ ++G + +L ++K DVV ++++ A + +ES + +++ +
Sbjct: 330 LINGLGKAGLLNDAGRLFDRMKSKGCNPDVVTYSTLITALGKAARVESACVLFEEMESVG 389
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
I PD T+ +I K A R +M KG P+ ++ + LG+ EA
Sbjct: 390 IQPDLFTYCSIITVLGKAGQVDDADRLFSEMRGKGLSPDVITYNAFLNSLGRGGRFKEAR 449
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLKDA 154
++ ++ S A ++ +L L K + DA
Sbjct: 450 KIFEDMKESGLLPDVATYDALLLGLSKTKEVDDA 483
Score = 37.4 bits (85), Expect = 2.2, Method: Composition-based stats.
Identities = 30/131 (22%), Positives = 53/131 (40%), Gaps = 3/131 (2%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ ++G F+E +L + DV N ++ + G + + ++ E
Sbjct: 85 LVDCLGKAGQFDEALRLLAEMRDNGCVPDVRTYNCLISTLGKAGRLSEAFTLFAEMRERG 144
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
PD T++ LI K A + +M R G P+ SSLI LGK E +
Sbjct: 145 CVPDTFTYNSLIYGLGKVGRSQKAMELLEEMERHGCPPDVMTYSSLITGLGK---DGETV 201
Query: 121 SVYNMLRYSKR 131
+ + + KR
Sbjct: 202 KAFKLFQEMKR 212
>gi|356532716|ref|XP_003534917.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Glycine max]
Length = 527
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/122 (23%), Positives = 58/122 (47%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ A C+ G +E K L + K +VV N+++ YC G++++ + + +
Sbjct: 226 LMDALCKEGKVKEAKNLLAVMTKEGVKPNVVSYNTLMDGYCLIGEVQNAKQMFHTMVQKG 285
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
++P+ +++I+I CK K A + ++ K P SSLI K+ + AL
Sbjct: 286 VNPNVYSYNIMIDRLCKSKRVDEAMNLLREVLHKNMVPNTVTYSSLIDGFCKLGRITSAL 345
Query: 121 SV 122
+
Sbjct: 346 DL 347
Score = 40.0 bits (92), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 26/124 (20%), Positives = 55/124 (44%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ C G +++ A+ + D V ++L C+ G+ S + ++R +++ +
Sbjct: 86 LMKGLCLKGEVKKSLHFHDKVVAQGFQMDQVSYATLLNGLCKIGETRSALKLLRMIEDRS 145
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
P+ ++ +I CK+K+ AY +M +G P S+LI+ EA
Sbjct: 146 TRPNVVMYNTIIDGLCKDKLVNEAYDLYSEMDARGIFPNVITYSTLIYGFCLAGQLMEAF 205
Query: 121 SVYN 124
+ N
Sbjct: 206 GLLN 209
Score = 38.9 bits (89), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 29/126 (23%), Positives = 55/126 (43%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
MI C+S +E L + K + V +S++ +C+ G + S + +++++
Sbjct: 296 MIDRLCKSKRVDEAMNLLREVLHKNMVPNTVTYSSLIDGFCKLGRITSALDLLKEMYHRG 355
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
D T+ L+ CK + A + M +G QP + ++LI L K H A
Sbjct: 356 QPADVVTYTSLLDALCKNQNLDKATALFMKMKERGIQPNKYTYTALIDGLCKGGRHKNAQ 415
Query: 121 SVYNML 126
++ L
Sbjct: 416 KLFQHL 421
Score = 37.4 bits (85), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 20/99 (20%), Positives = 45/99 (45%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C+ E L + +A+ +V+ ++++ +C G + ++ ++
Sbjct: 156 IIDGLCKDKLVNEAYDLYSEMDARGIFPNVITYSTLIYGFCLAGQLMEAFGLLNEMILKN 215
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPE 99
I+P+ T+ IL+ CKE A + M ++G +P
Sbjct: 216 INPNVYTYTILMDALCKEGKVKEAKNLLAVMTKEGVKPN 254
Score = 35.4 bits (80), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 26/123 (21%), Positives = 57/123 (46%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ +C G + KQ+ K +V N M+ C++ ++ M+++R++
Sbjct: 261 LMDGYCLIGEVQNAKQMFHTMVQKGVNPNVYSYNIMIDRLCKSKRVDEAMNLLREVLHKN 320
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ P+ T+ LI FCK A + +M+ +G + +SL+ L K + +A
Sbjct: 321 MVPNTVTYSSLIDGFCKLGRITSALDLLKEMYHRGQPADVVTYTSLLDALCKNQNLDKAT 380
Query: 121 SVY 123
+++
Sbjct: 381 ALF 383
>gi|297836911|ref|XP_002886337.1| F1N19.15 [Arabidopsis lyrata subsp. lyrata]
gi|297332178|gb|EFH62596.1| F1N19.15 [Arabidopsis lyrata subsp. lyrata]
Length = 1059
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/150 (22%), Positives = 69/150 (46%), Gaps = 8/150 (5%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+++ FC+ F+E L + +VV+ N+++ C+ D+ + + + +++
Sbjct: 691 LLNGFCQGNRFQEAVSLVDSMAELGLEPNVVIYNTVINGLCKNRDLNNALEIFYGMEKKG 750
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
I D T++ LI C + A R + DM ++ P ++LI K EA
Sbjct: 751 IVADAVTYNTLISGLCNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEAK 810
Query: 121 SVYNMLRYSKRSMCKALHEKIL--HILISG 148
++Y K + +++H IL + LI+G
Sbjct: 811 NLY------KEMIRRSVHPNILTYNSLING 834
Score = 40.4 bits (93), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 29/111 (26%), Positives = 47/111 (42%), Gaps = 1/111 (0%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYD-KYDVVLLNSMLCAYCRTGDMESVMHVMRKLDEL 59
+I C++G +L + E K D+V N++L C +G+ ++R + +
Sbjct: 176 LIDCLCKNGDVNIALELLNEMEKKGRLAADLVTYNTLLTGLCYSGEWRQAARILRDMTKR 235
Query: 60 AISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHL 110
I+PD TF LI F K+ A M + P +SLI L
Sbjct: 236 RINPDVFTFTALIDAFVKQGNLDEAQELYKQMLQSSIGPNTVTYNSLINGL 286
Score = 40.0 bits (92), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 45/95 (47%)
Query: 30 VVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYMLAYRTMV 89
+V +L A + + V+++ K++ L IS D +F ILI FC+ + LA +
Sbjct: 615 IVDFTRVLTAIAKMNKFDIVIYLFHKMENLGISHDLYSFTILIHCFCRCSRFSLALALLG 674
Query: 90 DMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVYN 124
M + G QP SL+ + EA+S+ +
Sbjct: 675 KMMKLGFQPSIVTLGSLLNGFCQGNRFQEAVSLVD 709
Score = 38.9 bits (89), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 18/78 (23%), Positives = 37/78 (47%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ FC+S E+ +L + + D N+++ YC+ G + V ++ +
Sbjct: 866 LITGFCKSKRVEDGMKLFCEMTHQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCG 925
Query: 61 ISPDYNTFHILIKYFCKE 78
+ PD T++IL+ C
Sbjct: 926 VPPDIVTYNILLDCLCNN 943
Score = 38.5 bits (88), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 25/110 (22%), Positives = 46/110 (41%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I FCR F L G + +V L S+L +C+ + + ++ + EL
Sbjct: 656 LIHCFCRCSRFSLALALLGKMMKLGFQPSIVTLGSLLNGFCQGNRFQEAVSLVDSMAELG 715
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHL 110
+ P+ ++ +I CK + A M +KG + ++LI L
Sbjct: 716 LEPNVVIYNTVINGLCKNRDLNNALEIFYGMEKKGIVADAVTYNTLISGL 765
Score = 37.0 bits (84), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 22/95 (23%), Positives = 40/95 (42%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I F + G E K L + + +++ NS++ +C G + H+ +
Sbjct: 796 LIDTFVKEGNLLEAKNLYKEMIRRSVHPNILTYNSLINGFCIQGRLGDAKHMFDLMVSKG 855
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKG 95
PD T++ LI FCK K + +M +G
Sbjct: 856 CFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTHQG 890
Score = 36.2 bits (82), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 22/102 (21%), Positives = 50/102 (49%), Gaps = 1/102 (0%)
Query: 29 DVVLLNSMLCAYCRTGDMESVMHVMRKLDELA-ISPDYNTFHILIKYFCKEKMYMLAYRT 87
+VV+ N+++ C+ GD+ + ++ ++++ ++ D T++ L+ C + A R
Sbjct: 169 NVVVYNTLIDCLCKNGDVNIALELLNEMEKKGRLAADLVTYNTLLTGLCYSGEWRQAARI 228
Query: 88 MVDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVYNMLRYS 129
+ DM ++ P+ ++LI K EA +Y + S
Sbjct: 229 LRDMTKRRINPDVFTFTALIDAFVKQGNLDEAQELYKQMLQS 270
>gi|255561943|ref|XP_002521980.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223538784|gb|EEF40384.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 584
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/107 (24%), Positives = 49/107 (45%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ FCR G + + + D+V N+++ CRTG + + V KLDE+
Sbjct: 354 LIAGFCREGRLDLATEFLEYMISDGCLPDIVNYNTIMAGLCRTGKADQALEVFEKLDEVG 413
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLI 107
P+ ++++ L A ++ + +G P+E +SLI
Sbjct: 414 CPPNVSSYNTLFSALWSSGDRYRALEMILKLLNQGIDPDEITYNSLI 460
Score = 40.4 bits (93), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 29/118 (24%), Positives = 56/118 (47%)
Query: 9 GCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTF 68
G + E ++L + + K +VV + ++ CR G +E ++++R + E + PD +
Sbjct: 292 GKWSEGEKLISEMISIGCKPNVVTHSILIGTLCRDGKVEEAVNLLRSMKEKGLKPDAYCY 351
Query: 69 HILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVYNML 126
LI FC+E LA + M G P+ ++++ L + +AL V+ L
Sbjct: 352 DPLIAGFCREGRLDLATEFLEYMISDGCLPDIVNYNTIMAGLCRTGKADQALEVFEKL 409
Score = 38.9 bits (89), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 24/98 (24%), Positives = 44/98 (44%)
Query: 29 DVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYMLAYRTM 88
D + NS++ CR G ++ + ++ + P+ +++I++ CK A +
Sbjct: 452 DEITYNSLISCLCRDGMVDEAIELLVDMQSGRYRPNVVSYNIILLGLCKVNRANDAIEVL 511
Query: 89 VDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVYNML 126
M KG QP E LI +G +EA+ + N L
Sbjct: 512 AAMTEKGCQPNETTYILLIEGIGFSGLRAEAMELANSL 549
Score = 38.1 bits (87), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 17/75 (22%), Positives = 35/75 (46%)
Query: 24 KYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYML 83
+Y K DV N+++ + + +E+ V+ ++ PD T++I+I FC L
Sbjct: 132 RYGKPDVFAYNALISGFIKANQLENANRVLDRMKSRGFLPDVVTYNIMIGSFCSRGKLDL 191
Query: 84 AYRTMVDMHRKGHQP 98
A ++ + +P
Sbjct: 192 ALEIFEELLKDNCEP 206
Score = 37.0 bits (84), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 19/73 (26%), Positives = 35/73 (47%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+IS CR G +E +L D ++ + +VV N +L C+ + V+ + E
Sbjct: 459 LISCLCRDGMVDEAIELLVDMQSGRYRPNVVSYNIILLGLCKVNRANDAIEVLAAMTEKG 518
Query: 61 ISPDYNTFHILIK 73
P+ T+ +LI+
Sbjct: 519 CQPNETTYILLIE 531
Score = 37.0 bits (84), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 22/99 (22%), Positives = 48/99 (48%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+IS F ++ E ++ +++ DVV N M+ ++C G ++ + + +L +
Sbjct: 144 LISGFIKANQLENANRVLDRMKSRGFLPDVVTYNIMIGSFCSRGKLDLALEIFEELLKDN 203
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPE 99
P T+ ILI+ + +A + + +M KG +P+
Sbjct: 204 CEPTVITYTILIEATILDGGIDVAMKLLDEMLSKGLEPD 242
>gi|224081220|ref|XP_002306340.1| predicted protein [Populus trichocarpa]
gi|222855789|gb|EEE93336.1| predicted protein [Populus trichocarpa]
Length = 416
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/126 (27%), Positives = 61/126 (48%), Gaps = 6/126 (4%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTG---DMESVMHVMRKLD 57
++ AF ++ + L D E D+ N +L AY + G +MESV+ M K+D
Sbjct: 170 ILRAFAQARNVNQVNALFKDLEESIVSPDIYTYNGVLDAYGKNGMIREMESVLSRM-KID 228
Query: 58 ELAISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHS 117
+ PD TF++LI + K++ + + + R +P +S+I + GK R
Sbjct: 229 Q--CKPDIITFNLLIDSYGKKQDFEKMEQVFKSLLRSKEKPTLPTFNSMIVNYGKARLKD 286
Query: 118 EALSVY 123
+A SV+
Sbjct: 287 KAESVF 292
>gi|359473479|ref|XP_002267299.2| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At1g13630-like [Vitis
vinifera]
Length = 829
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/155 (23%), Positives = 73/155 (47%), Gaps = 2/155 (1%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I FC+ G E +L + V +++ YC GDM S+ ++ +++ A
Sbjct: 556 LIYGFCKKGKLAEAVKLLDTIKVHGLVPTSVTYTTLMNGYCEEGDMHSMFDMLHEMEAKA 615
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
I P T+ +++K CKE + + + M+ +G P++ +++I K +A
Sbjct: 616 IKPTQITYTVVVKGLCKEGRLHESVQLLKYMYARGLFPDQITYNTVIQSFCKAHDLQKAF 675
Query: 121 SVYN-MLRYSKRSMCKALHEKILHILISGKLLKDA 154
++N ML++S + + I + + G LKDA
Sbjct: 676 QLHNQMLQHSLQPSPVTYNVLINGLCVYGN-LKDA 709
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/119 (25%), Positives = 58/119 (48%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C+ G EE+ +L ++ K +V +L + C++G ++ + ++ +++ +
Sbjct: 381 LICGHCQMGNIEESFKLKEKMLSQGLKLSIVTYTVLLSSLCKSGRIDEAVILLHEMEVIG 440
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEA 119
+ PD T+ +LI CK A +M K P +CS++I L + A SEA
Sbjct: 441 LKPDLLTYSVLIHGLCKRGAVEEAIELYEEMCSKRIYPNSFVCSAIISGLFEKGAISEA 499
Score = 37.4 bits (85), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 28/108 (25%), Positives = 49/108 (45%), Gaps = 2/108 (1%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYD-KYDVVLLNSMLCAYCRTGDMESVMHVMRKLDEL 59
+IS G E Q+ D K D +++L N M+ Y + G++ + +++ E
Sbjct: 486 IISGLFEKGAISEA-QMYFDSVTKSDVAEEIILYNIMIDGYAKLGNIGEAVRSYKQIIEK 544
Query: 60 AISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLI 107
ISP TF+ LI FCK+ A + + + G P ++L+
Sbjct: 545 GISPTIVTFNSLIYGFCKKGKLAEAVKLLDTIKVHGLVPTSVTYTTLM 592
>gi|297808773|ref|XP_002872270.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297318107|gb|EFH48529.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 492
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 53/94 (56%), Gaps = 5/94 (5%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++S+ + G EE +++ ++EA+ YDV + N +L AY R G++ + ++ E
Sbjct: 322 VLSSLVKIGDLEEAERVFNEWEAQCFNYDVRVSNVLLGAYMRNGEIRKAESLHARVLERG 381
Query: 61 ISPDYNTFHILIKYFCK-EKMYMLAYRTMVDMHR 93
+P+Y T+ IL++ + K + M + +V MHR
Sbjct: 382 GNPNYKTWEILMEGWVKCQSM----EKAIVAMHR 411
>gi|297797613|ref|XP_002866691.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297312526|gb|EFH42950.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 638
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/129 (24%), Positives = 58/129 (44%), Gaps = 2/129 (1%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ A C+ G ++ +L D ++ ++ S+L +CR M +V+ ++ E
Sbjct: 225 LLDALCKHGSVKDAAKLFEDMRLRF-PVNLRYFTSLLYGWCREEKMMEAKYVLVQMKEAG 283
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
PD + L+ + AY + DM R+G +P + LI L K+ EA+
Sbjct: 284 FEPDIVDYTNLLSGYANAGKMADAYDLLKDMRRRGFEPNATCYTVLIQALCKVDRMEEAM 343
Query: 121 SVY-NMLRY 128
V+ M RY
Sbjct: 344 KVFVEMERY 352
>gi|125561029|gb|EAZ06477.1| hypothetical protein OsI_28715 [Oryza sativa Indica Group]
Length = 621
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 47/97 (48%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I A C+ EE + G K K + V+ S++ C+TG +++ +M+K+
Sbjct: 323 LIDALCKREKVEEAQLFLGSLVKKGVKVNEVVYTSLIDGLCKTGKIDAADELMQKMISEG 382
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQ 97
PD +++ LI C++K A + DM KG Q
Sbjct: 383 FVPDAHSYSSLIDGLCRQKKLSQATLMLEDMMEKGIQ 419
Score = 40.8 bits (94), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 28/119 (23%), Positives = 50/119 (42%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I +C +G E ++ + +V ++ C++G +E M + ++ E
Sbjct: 218 LIDGYCNAGEMEHALKVFEGMDGNRCSPNVRTYTELIHGLCKSGKVERAMVLFSRMVEAG 277
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEA 119
+ P+ T+ LI+ C E A+R + M G P + S LI L K EA
Sbjct: 278 LEPNVVTYTALIQGQCNEGHLQCAFRLLHLMETNGLVPNDWTFSVLIDALCKREKVEEA 336
Score = 38.1 bits (87), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 22/79 (27%), Positives = 36/79 (45%)
Query: 29 DVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYMLAYRTM 88
++V+ N+++ YC G+ME + V +D SP+ T+ LI CK A
Sbjct: 211 NIVVYNALIDGYCNAGEMEHALKVFEGMDGNRCSPNVRTYTELIHGLCKSGKVERAMVLF 270
Query: 89 VDMHRKGHQPEEELCSSLI 107
M G +P ++LI
Sbjct: 271 SRMVEAGLEPNVVTYTALI 289
Score = 37.0 bits (84), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 25/125 (20%), Positives = 55/125 (44%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I R E K++ A D+V + +YC G ME ++ ++ +
Sbjct: 428 IIDELVREVGSEGPKKIFDKMIATGINPDIVTYTVFVRSYCEEGRMEDAESMIVQMVDRG 487
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ P+ T++ LI+ + + A+ T M KG +P E+ + L+ + K + ++
Sbjct: 488 VFPNLVTYNTLIRGYANLGLVSQAFSTFEVMVGKGWKPNEDSYTVLLRLVVKKSSSDNSV 547
Query: 121 SVYNM 125
++ +
Sbjct: 548 DIWKI 552
Score = 36.6 bits (83), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 29/121 (23%), Positives = 53/121 (43%), Gaps = 3/121 (2%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C+SG E L + +VV +++ C G ++ ++ ++
Sbjct: 253 LIHGLCKSGKVERAMVLFSRMVEAGLEPNVVTYTALIQGQCNEGHLQCAFRLLHLMETNG 312
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHL---GKMRAHS 117
+ P+ TF +LI CK + A + + +KG + E + +SLI L GK+ A
Sbjct: 313 LVPNDWTFSVLIDALCKREKVEEAQLFLGSLVKKGVKVNEVVYTSLIDGLCKTGKIDAAD 372
Query: 118 E 118
E
Sbjct: 373 E 373
>gi|334183970|ref|NP_177858.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|332197845|gb|AEE35966.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 402
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/122 (25%), Positives = 55/122 (45%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++S+ R G EE K+L + D+ N+++ YC+ G + + L +
Sbjct: 126 LLSSLARFGLVEEMKRLYTEMLEDLVSPDIYTFNTLVNGYCKLGYVVEAKQYVTWLIQAG 185
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
PDY T+ I C+ K A++ +M + G E + LI+ L + + EAL
Sbjct: 186 CDPDYFTYTSFITGHCRRKEVDAAFKVFKEMTQNGCHRNEVSYTQLIYGLFEAKKIDEAL 245
Query: 121 SV 122
S+
Sbjct: 246 SL 247
>gi|242052075|ref|XP_002455183.1| hypothetical protein SORBIDRAFT_03g005716 [Sorghum bicolor]
gi|241927158|gb|EES00303.1| hypothetical protein SORBIDRAFT_03g005716 [Sorghum bicolor]
Length = 892
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/119 (21%), Positives = 55/119 (46%), Gaps = 4/119 (3%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ CR G +L + +V +++ +C+ G+M+ + K+ + +
Sbjct: 446 LIAGLCRKGDLASAMELHREMARNGVSGNVYTFTTLISGFCKDGNMDEAARLFDKMIDSS 505
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEE----ELCSSLIFHLGKMRA 115
+ P+ TF+++I+ +C+ A++ M +G P+ L S L LG M+A
Sbjct: 506 VVPNEVTFNVMIEGYCRVGNVRKAFQLYDQMVDRGLTPDNYTYRSLISVLCLTLGAMKA 564
Score = 41.6 bits (96), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 25/100 (25%), Positives = 42/100 (42%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ +C+ F + + L + K + ++ CR GD+ S M + R++
Sbjct: 411 LINGYCQHDNFHQARGLLNEMVEKGLAPSAASYSPLIAGLCRKGDLASAMELHREMARNG 470
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEE 100
+S + TF LI FCK+ A R M P E
Sbjct: 471 VSGNVYTFTTLISGFCKDGNMDEAARLFDKMIDSSVVPNE 510
Score = 38.5 bits (88), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 30/110 (27%), Positives = 48/110 (43%), Gaps = 2/110 (1%)
Query: 4 AFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISP 63
FC+ G ET + + A+ K D++ ++ A + D E + + R++ E + P
Sbjct: 589 GFCKEGRLTETYHIWDEMRARGVKLDLISFTVIVYAALKLHDGEKISVLFREMKEKGVKP 648
Query: 64 DYNTFHI-LIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGK 112
D N FH +I KE+ + A M G P + LI HL K
Sbjct: 649 D-NVFHTCMIDVHSKEENIVQALNCWDKMIADGCSPNVVTYTVLINHLCK 697
Score = 37.7 bits (86), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 29/127 (22%), Positives = 56/127 (44%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ FCR+ E ++ D + + V + M+ + G ++ + L EL
Sbjct: 271 LVYGFCRTEELEMALEMTDDMLSLHFVPSVASCSFMVDGLRKRGHIDKAFRLACHLGELG 330
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ P+ + LI CK++ + A R M +G +P E + LI L K +AL
Sbjct: 331 MVPNLFACNALIDKLCKDRRFREAERLFRGMANRGLEPNEVTYAILIHSLCKRGMMDDAL 390
Query: 121 SVYNMLR 127
+++ +R
Sbjct: 391 CMFDRMR 397
>gi|357134934|ref|XP_003569069.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g48810-like [Brachypodium distachyon]
Length = 642
Score = 47.4 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 39/161 (24%), Positives = 78/161 (48%), Gaps = 11/161 (6%)
Query: 2 ISAFCRSGCFEETKQLAGDFEAKYD----KYDVVLLNSMLCAYCRTGDMESVMHVMRKLD 57
I AF R+G + + L + A++D V + N +L A R + +V+ V +
Sbjct: 97 ICAFARAGAAD--RALKTFYRARHDLGCAAPTVRVYNHLLDALLRENLVAAVVPVYDNMR 154
Query: 58 ELAISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHS 117
+ + P+ T+++LIK C+ A R + +M RKG +P+E +++I L K+
Sbjct: 155 KAGVEPNVYTYNLLIKALCQNDRVGAARRMLDEMARKGCRPDEVSHTTIISALCKLDRLD 214
Query: 118 EALSVYNMLRYSKRSMCKALHEKILHILISGKLLKDAYIVV 158
EA + ++ + A + ++H L +++ ++VV
Sbjct: 215 EARGI-----LAEMTPVGASYNAVVHALCGQFRMREVFLVV 250
>gi|147798989|emb|CAN61637.1| hypothetical protein VITISV_008458 [Vitis vinifera]
Length = 708
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/150 (26%), Positives = 65/150 (43%), Gaps = 2/150 (1%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+IS FCR +E+++L + + SM+C YCR G+ + + +++
Sbjct: 511 LISXFCRQKQMKESERLFEEAVSLGLIPTKKTYTSMICGYCRYGNTSLAVKLFQRMSNHG 570
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+PD T+ LI CKE A M KG P E +L + K S A+
Sbjct: 571 CAPDSITYGALISGLCKESKLDDARNLYDAMMDKGLSPCEVTRLTLAYEYCKKDDSSTAI 630
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKL 150
+V + R KR + ++ + + GKL
Sbjct: 631 NVLD--RLEKRQWIRTVNTLVRKLCSEGKL 658
Score = 42.4 bits (98), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 31/126 (24%), Positives = 57/126 (45%), Gaps = 3/126 (2%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKY--DVVLLNSMLCAYCRTGDMESVMHVMRKLDE 58
+I C+ G E+ +L + D Y +V +M+ YC+ + ++ ++ E
Sbjct: 335 LIDGLCKKGWTEKAFRLFLKL-VRSDGYKPNVHTYTAMINGYCKEDKLNRAEMLLSRMQE 393
Query: 59 LAISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSE 118
+ P+ NT+ LI CK ++ AY M M ++G P +++I L K + E
Sbjct: 394 QGLVPNTNTYTTLIDGHCKVGNFVRAYELMDLMGKEGFSPNIYTYNAIIDGLCKKGSLDE 453
Query: 119 ALSVYN 124
A + N
Sbjct: 454 AYRLLN 459
Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 23/107 (21%), Positives = 47/107 (43%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C+ G +E +L + D V ++ +CR D + K+ ++
Sbjct: 441 IIDGLCKKGSLDEAYRLLNKVSVHGLQADGVTYTILMSVHCRQADTNRSLVFFNKMLKVG 500
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLI 107
+PD +++ LI FC++K + R + G P ++ +S+I
Sbjct: 501 FTPDIHSYTTLISXFCRQKQMKESERLFEEAVSLGLIPTKKTYTSMI 547
Score = 40.0 bits (92), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 28/123 (22%), Positives = 54/123 (43%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
M+ A C G E ++ + D ++ A+C+ G + V+ K+ E+
Sbjct: 230 MVVACCNMGRVLEAEKWLNAMVERGFIVDNATCTLIIDAFCQKGYVNRVVGYFWKMVEMG 289
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
++P+ F LI CK+ A+ + +M R+G +P ++LI L K +A
Sbjct: 290 LAPNVINFTALINGLCKQGSIKQAFELLEEMVRRGWKPNVYTHTTLIDGLCKKGWTEKAF 349
Query: 121 SVY 123
++
Sbjct: 350 RLF 352
>gi|87162841|gb|ABD28636.1| Tetratricopeptide-like helical [Medicago truncatula]
Length = 1053
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 40/76 (52%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ A + G E+ +L D E +Y K+D ++S++ YC+ GDME + K
Sbjct: 808 LLVATSKIGQLEKAFELLNDMEKQYIKFDNFTVSSVINCYCQKGDMEGALEFYYKFKGKD 867
Query: 61 ISPDYNTFHILIKYFC 76
ISPD+ F +I+ C
Sbjct: 868 ISPDFLGFLYMIRGLC 883
Score = 40.4 bits (93), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 28/124 (22%), Positives = 51/124 (41%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C+ G + L E K ++V+ NS++ C G + + L++L
Sbjct: 703 VIHGLCKGGYLNKALDLCTLIEKKGVNLNIVIYNSIINGLCHDGCLIEAFRLFDSLEKLN 762
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ T+ LI C+E A M G QP+ ++ +SL+ K+ +A
Sbjct: 763 LMTSEITYATLIYALCREGYLQDAEHVFKKMVLNGFQPKTQVYNSLLVATSKIGQLEKAF 822
Query: 121 SVYN 124
+ N
Sbjct: 823 ELLN 826
Score = 39.3 bits (90), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 35/148 (23%), Positives = 64/148 (43%), Gaps = 4/148 (2%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+++A C+ G +E L E DVVL + +C Y + V MR++ E
Sbjct: 187 VVNALCKLGRVDEVCGLVRKMEEDGLDLDVVLYSVWVCGYVEEKVLVEVFRKMREMVEKG 246
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
I D+ ++ ILI F K ++ + M ++G P + ++++ K EA
Sbjct: 247 ICHDFVSYTILIDGFSKLGDVEKSFTFLAKMIKEGIIPNKVTYTAIMSAYCKKGRIEEAF 306
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISG 148
++ + + M L E + +LI G
Sbjct: 307 GLFVRM----KDMGIELDEFVFVVLIDG 330
Score = 38.9 bits (89), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 29/131 (22%), Positives = 59/131 (45%), Gaps = 5/131 (3%)
Query: 31 VLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYMLAYRTMVD 90
V +++ AYC+ G +E + ++ ++ I D F +LI F + + ++ +V+
Sbjct: 287 VTYTAIMSAYCKKGRIEEAFGLFVRMKDMGIELDEFVFVVLIDGFGRVGDFDRVFQLLVE 346
Query: 91 MHRKGHQPEEELCSSLIFHLGKMRAHSEALSVYNMLRYSKRSMCKALH-----EKILHIL 145
M ++G P ++++ L K EA + + LH + +L IL
Sbjct: 347 MEKRGIGPNVVTYNAVVNGLSKYGRTQEADEFSKNVTADVVTYSTLLHGYTEEDNVLGIL 406
Query: 146 ISGKLLKDAYI 156
+ K L++A I
Sbjct: 407 QTKKRLEEAGI 417
Score = 38.9 bits (89), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 23/95 (24%), Positives = 51/95 (53%), Gaps = 2/95 (2%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++SAF R+G E + +F + ++V +++ A C+ G ++ V ++RK++E
Sbjct: 154 VVSAFSRAGKPELSLWFFDNFMGS--RPNLVTYTAVVNALCKLGRVDEVCGLVRKMEEDG 211
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKG 95
+ D + + + + +EK+ + +R M +M KG
Sbjct: 212 LDLDVVLYSVWVCGYVEEKVLVEVFRKMREMVEKG 246
>gi|302826107|ref|XP_002994593.1| hypothetical protein SELMODRAFT_138846 [Selaginella moellendorffii]
gi|300137364|gb|EFJ04344.1| hypothetical protein SELMODRAFT_138846 [Selaginella moellendorffii]
Length = 521
Score = 47.4 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 35/139 (25%), Positives = 65/139 (46%), Gaps = 6/139 (4%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTG---DMESVMHVMRKLD 57
++SA+ R+G EE ++L E K D ++ NS++ AY +G DME+++ M K
Sbjct: 355 LLSAYARAGRVEEAEELVSAMERDGTKPDTLIYNSLINAYGVSGRHEDMEALLAKMVKSS 414
Query: 58 ELAISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHS 117
PD T++ LI+ + + A + R P+ ++L+ K + +
Sbjct: 415 SKQTKPDIGTYNTLIQVYAQAGFIPRAEELFQGLARLKLVPDATTWTALMGGYAKKKLYR 474
Query: 118 EALSVYNMLRYSKRSMCKA 136
+ S+ L+ S C+A
Sbjct: 475 KCTSI---LKKMLESGCRA 490
Score = 36.2 bits (82), Expect = 4.9, Method: Composition-based stats.
Identities = 23/101 (22%), Positives = 45/101 (44%), Gaps = 6/101 (5%)
Query: 1 MISAFCRSGCFEETKQL---AGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLD 57
+++AF R G + E ++ +F+ K D Y N+++ AY + G + + + +
Sbjct: 250 LMNAFARQGLYREAERYFDKLQEFDYKPDHY---AYNALMEAYSQGGSPAGALEIFQTMQ 306
Query: 58 ELAISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQP 98
PD + +ILI + + +Y A + M G P
Sbjct: 307 RNGCFPDTVSHNILINAYGRAGLYEDAEKIFKSMQSAGFSP 347
>gi|168049701|ref|XP_001777300.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162671276|gb|EDQ57830.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 291
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/100 (26%), Positives = 52/100 (52%), Gaps = 2/100 (2%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I SGC + K++ D + K D VL NS+L AYC++G +E+ + + +
Sbjct: 17 IIDTLGSSGCLDLAKKIFSDMDDSVKK-DTVLYNSLLHAYCKSGQVETANELFNSMKQKD 75
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMV-DMHRKGHQPE 99
PD +T++ ++ + K + + ++ +M +G QP+
Sbjct: 76 CRPDLSTYNTIMNMYVKTDVGLTKVLSLFKEMCLQGIQPD 115
>gi|356510837|ref|XP_003524140.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g33170-like [Glycine max]
Length = 561
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/91 (21%), Positives = 43/91 (47%), Gaps = 3/91 (3%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ + ++G ++ +++ FE D ++ N+M+ Y + GD +S + L+
Sbjct: 240 VVDGYGKAGVVDDARRV---FEDSLDDMNIAGWNAMMAGYAQHGDYQSAFELFESLEGFG 296
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDM 91
+ PD TF ++ C M++ YR M
Sbjct: 297 LVPDEYTFLAILTALCNAGMFLEIYRWFTRM 327
>gi|357130244|ref|XP_003566760.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g40400-like [Brachypodium distachyon]
Length = 579
Score = 47.4 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 39/152 (25%), Positives = 63/152 (41%), Gaps = 1/152 (0%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+++A CR E + + E + + DVV N++L YCR G ++ +H+ +
Sbjct: 220 LVTALCRGEDAERAQGFLEELEEQGFEPDVVTYNTLLSGYCRRGKLQDALHLFGVMPPRG 279
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIF-HLGKMRAHSEA 119
+ PD + +L+ CK A R M G P+ S LI + + R
Sbjct: 280 VEPDLVSHTVLMDGLCKAGRLNDARRMFDRMVHSGVSPDAIAYSVLIAGYCNEQRVREAR 339
Query: 120 LSVYNMLRYSKRSMCKALHEKILHILISGKLL 151
L + M+ S AL I + GKLL
Sbjct: 340 LLLMEMVGSGLSSEGFALRAVIESHVKVGKLL 371
Score = 40.4 bits (93), Expect = 0.22, Method: Composition-based stats.
Identities = 17/76 (22%), Positives = 37/76 (48%)
Query: 32 LLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYMLAYRTMVDM 91
+ N +L C+ ++ + V ++ + PD++T+ L+ C+ + M +M
Sbjct: 426 MYNMILDCLCQCDSVDDALDVKVEMSSREVRPDFHTYQALVTCLCRLGKSLDGKSVMAEM 485
Query: 92 HRKGHQPEEELCSSLI 107
G QP E +C++L+
Sbjct: 486 IESGLQPNEAICTALV 501
Score = 35.8 bits (81), Expect = 6.1, Method: Composition-based stats.
Identities = 22/99 (22%), Positives = 42/99 (42%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+++A R+G F+E + + N ++ A CR D E + +L+E
Sbjct: 185 LLAALSRAGRFDELWAARAVMARAEVRPNTHTFNILVTALCRGEDAERAQGFLEELEEQG 244
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPE 99
PD T++ L+ +C+ A M +G +P+
Sbjct: 245 FEPDVVTYNTLLSGYCRRGKLQDALHLFGVMPPRGVEPD 283
>gi|356498873|ref|XP_003518272.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like [Glycine max]
Length = 566
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/126 (23%), Positives = 58/126 (46%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I A C+ + +L + K K DVV N ++ +C+ G ++ + ++KL
Sbjct: 212 LIDATCKESGVGQAMKLFNEMRGKGCKPDVVTYNVLIKGFCKEGRLDEAIIFLKKLPSYG 271
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
D + +++++ C +M A + + M RKG P + LI L + +AL
Sbjct: 272 CQSDVISHNMILRSLCSGGRWMDAMKLLATMLRKGCFPSVVTFNILINFLCQKGLLGKAL 331
Query: 121 SVYNML 126
+V M+
Sbjct: 332 NVLEMM 337
Score = 44.7 bits (104), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 28/127 (22%), Positives = 57/127 (44%), Gaps = 3/127 (2%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I FC+ G + ++ G E D N ++ AYC++G++E + V LD +
Sbjct: 110 LIREFCKIGRTKNATRIMGILEESGAVIDANSYNVLINAYCKSGEIEEALRV---LDHTS 166
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
++P+ T+ ++ C A + + + P+ C+ LI K +A+
Sbjct: 167 VAPNAATYDAVLCSLCDRGKLKQAMQVLDRQLQSKCYPDVVTCTVLIDATCKESGVGQAM 226
Query: 121 SVYNMLR 127
++N +R
Sbjct: 227 KLFNEMR 233
Score = 44.3 bits (103), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 48/99 (48%), Gaps = 3/99 (3%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+A+C+SG EE ++ + + +++LC+ C G ++ M V+ + +
Sbjct: 145 LINAYCKSGEIEEALRV---LDHTSVAPNAATYDAVLCSLCDRGKLKQAMQVLDRQLQSK 201
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPE 99
PD T +LI CKE A + +M KG +P+
Sbjct: 202 CYPDVVTCTVLIDATCKESGVGQAMKLFNEMRGKGCKPD 240
Score = 42.7 bits (99), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 26/107 (24%), Positives = 45/107 (42%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I FC+ G +E + + DV+ N +L + C G M ++ +
Sbjct: 247 LIKGFCKEGRLDEAIIFLKKLPSYGCQSDVISHNMILRSLCSGGRWMDAMKLLATMLRKG 306
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLI 107
P TF+ILI + C++ + A + M + GH P + LI
Sbjct: 307 CFPSVVTFNILINFLCQKGLLGKALNVLEMMPKHGHTPNSRSFNPLI 353
Score = 42.0 bits (97), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 24/99 (24%), Positives = 49/99 (49%)
Query: 29 DVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYMLAYRTM 88
D+V N +L A C+ G ++ + ++ +L SP +++ +I K LA +
Sbjct: 380 DIVTYNILLTALCKDGKVDDAVVILSQLSSKGCSPSLISYNTVIDGLLKVGKAELAVELL 439
Query: 89 VDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVYNMLR 127
+M KG +P+ C+S++ L + EA+ ++ L+
Sbjct: 440 EEMCYKGLKPDLITCTSVVGGLSREGKVHEAIKFFHYLK 478
Score = 37.4 bits (85), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 21/82 (25%), Positives = 38/82 (46%)
Query: 7 RSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYN 66
R+G EE + K DVV +++ +C+ G ++ +M L+E D N
Sbjct: 81 RNGELEEGSRFLEYMTNKGKIPDVVACTALIREFCKIGRTKNATRIMGILEESGAVIDAN 140
Query: 67 TFHILIKYFCKEKMYMLAYRTM 88
++++LI +CK A R +
Sbjct: 141 SYNVLINAYCKSGEIEEALRVL 162
Score = 35.8 bits (81), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 29/115 (25%), Positives = 51/115 (44%), Gaps = 1/115 (0%)
Query: 27 KYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYMLAYR 86
K D++ S++ R G + + L I P+ ++ ++ CK + LA
Sbjct: 448 KPDLITCTSVVGGLSREGKVHEAIKFFHYLKGFGIKPNAFIYNSIMMGLCKAQQTSLAID 507
Query: 87 TMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVYNMLRYSKRSMCKALHEKI 141
+VDM G +P E ++LI + EA + N L YS+ + K+L K+
Sbjct: 508 FLVDMVANGCKPTEASYTTLIKGITYEGLAEEASKLSNEL-YSRGLVKKSLIVKV 561
>gi|357155349|ref|XP_003577091.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g52620-like [Brachypodium distachyon]
Length = 877
Score = 47.4 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 31/107 (28%), Positives = 50/107 (46%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I F R+ +E +++ E K DVV N+M+ YC+ G M + M + ++
Sbjct: 545 LIDGFIRNESLDEARKIFEFMEQKGIHPDVVGYNAMIKGYCQFGMMNEAVECMSTMRKVG 604
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLI 107
PD T+ LI + K+ A + DM ++ QP SSLI
Sbjct: 605 RIPDEFTYTTLIGGYAKQGNISGALSLLCDMMKRRCQPNVVAYSSLI 651
Score = 43.9 bits (102), Expect = 0.021, Method: Composition-based stats.
Identities = 29/120 (24%), Positives = 58/120 (48%), Gaps = 4/120 (3%)
Query: 29 DVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYMLAYRTM 88
D + ++++ C+ G ++ ++R+ ++P+ +++ LI FC ++A +
Sbjct: 398 DAITFSTLISGLCQEGRVQEAERLLRETTRWELNPNLSSYTSLIHGFCVRGEVIVASNLL 457
Query: 89 VDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVYNMLRYSKRSMCKALHEKILHILISG 148
V+M +GH P+ +LI L SEAL V + + R + I ++LISG
Sbjct: 458 VEMMERGHTPDVVTFGALIHGLVVAGQVSEALLVRE--KMAARQLLP--DANIYNVLISG 513
Score = 41.6 bits (96), Expect = 0.097, Method: Composition-based stats.
Identities = 27/107 (25%), Positives = 48/107 (44%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I +CR G L G+ EAK VV +++ R GD+E + ++ ++ E
Sbjct: 300 LIDGYCRRGDVGRGILLLGEMEAKGLLPTVVTYGTLMSWLGRKGDLEKIASLLSEMRERR 359
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLI 107
+ P+ ++ +I CK + A + M G P+ S+LI
Sbjct: 360 LPPNVQIYNSVIDALCKCRSASQALVVLKQMFAGGCDPDAITFSTLI 406
Score = 40.8 bits (94), Expect = 0.17, Method: Composition-based stats.
Identities = 27/126 (21%), Positives = 54/126 (42%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I FC G L + + DVV +++ G + + V K+
Sbjct: 440 LIHGFCVRGEVIVASNLLVEMMERGHTPDVVTFGALIHGLVVAGQVSEALLVREKMAARQ 499
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ PD N +++LI CK+KM A + +M + P++ + ++LI + + EA
Sbjct: 500 LLPDANIYNVLISGLCKKKMLPAARNLIEEMLEQNVHPDKYVYTTLIDGFIRNESLDEAR 559
Query: 121 SVYNML 126
++ +
Sbjct: 560 KIFEFM 565
Score = 39.3 bits (90), Expect = 0.57, Method: Composition-based stats.
Identities = 26/122 (21%), Positives = 52/122 (42%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+IS C+ + L + + D + +++ + R ++ + +++
Sbjct: 510 LISGLCKKKMLPAARNLIEEMLEQNVHPDKYVYTTLIDGFIRNESLDEARKIFEFMEQKG 569
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
I PD ++ +IK +C+ M A M M + G P+E ++LI K S AL
Sbjct: 570 IHPDVVGYNAMIKGYCQFGMMNEAVECMSTMRKVGRIPDEFTYTTLIGGYAKQGNISGAL 629
Query: 121 SV 122
S+
Sbjct: 630 SL 631
Score = 36.6 bits (83), Expect = 4.0, Method: Composition-based stats.
Identities = 28/129 (21%), Positives = 59/129 (45%), Gaps = 6/129 (4%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDK---YDVVLLNSMLCAYCRTGDMESVMHVMRKLD 57
M+ C G E+ +L EA++ + V N ++ YCR GD+ + ++ +++
Sbjct: 265 MVRGLCLEGLVEKGLKL---IEARWGAGCVPNAVFYNVLIDGYCRRGDVGRGILLLGEME 321
Query: 58 ELAISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHS 117
+ P T+ L+ + ++ + +M + P ++ +S+I L K R+ S
Sbjct: 322 AKGLLPTVVTYGTLMSWLGRKGDLEKIASLLSEMRERRLPPNVQIYNSVIDALCKCRSAS 381
Query: 118 EALSVYNML 126
+AL V +
Sbjct: 382 QALVVLKQM 390
>gi|356525427|ref|XP_003531326.1| PREDICTED: pentatricopeptide repeat-containing protein At1g13040,
mitochondrial-like [Glycine max]
Length = 521
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/147 (22%), Positives = 66/147 (44%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I AF R G K+L + D + +++ C+ G ++ V R + E
Sbjct: 370 LIDAFLREGSTHVVKKLLDEMTKMRVLPDCIFYTAVVDHLCKNGKVDVAHSVFRDMVENG 429
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
++PD +++ L+ FCK M A +M KG P+E ++ L + + S A
Sbjct: 430 VNPDVISYNALLNGFCKTSRVMDAMHLFDEMQSKGLYPDEVTYKLIVGGLIRGKKISLAC 489
Query: 121 SVYNMLRYSKRSMCKALHEKILHILIS 147
V++ + ++ + L E +++ + S
Sbjct: 490 RVWDQMMERGFTLNRHLSETLVNAIQS 516
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/99 (24%), Positives = 46/99 (46%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ C G + +L K + ++ N+++ +CR G ++ M + +
Sbjct: 195 LVVGLCSGGRVDLAYELVVGVIKGGVKVNSLVYNALIDGFCRMGRVDKAMKIKAFMSRTG 254
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPE 99
PD T++IL+ Y C+E M A R + M R G +P+
Sbjct: 255 CVPDLVTYNILLNYCCEEGMVDEAVRLVETMERSGVEPD 293
Score = 40.0 bits (92), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 25/96 (26%), Positives = 46/96 (47%), Gaps = 1/96 (1%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I FCR G ++ ++ D+V N +L C G ++ + ++ ++
Sbjct: 230 LIDGFCRMGRVDKAMKIKAFMSRTGCVPDLVTYNILLNYCCEEGMVDEAVRLVETMERSG 289
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVD-MHRKG 95
+ PD +++ L+K FCK M A+ MV+ M KG
Sbjct: 290 VEPDLYSYNELLKGFCKANMVDRAHLMMVERMQTKG 325
Score = 39.7 bits (91), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 30/149 (20%), Positives = 70/149 (46%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+AFC++ + +L + K + D+V N ++ A+ R G V ++ ++ ++
Sbjct: 335 VITAFCKARRTRKGYELFEEMCGKGIRPDMVTFNILIDAFLREGSTHVVKKLLDEMTKMR 394
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ PD + ++ + CK +A+ DM G P+ ++L+ K +A+
Sbjct: 395 VLPDCIFYTAVVDHLCKNGKVDVAHSVFRDMVENGVNPDVISYNALLNGFCKTSRVMDAM 454
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGK 149
+++ ++ + ++ I+ LI GK
Sbjct: 455 HLFDEMQSKGLYPDEVTYKLIVGGLIRGK 483
Score = 37.7 bits (86), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 19/82 (23%), Positives = 36/82 (43%)
Query: 29 DVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYMLAYRTM 88
D+ N+ L CR +E+ + + + PD ++ I+I C K + A +
Sbjct: 118 DIWAFNTYLNLLCRQNRLETALELFHSMPSKGRDPDVVSYTIIIDALCNAKRFDEAAKVW 177
Query: 89 VDMHRKGHQPEEELCSSLIFHL 110
+ KG P+ + C +L+ L
Sbjct: 178 RRLIDKGLSPDYKACVALVVGL 199
Score = 37.7 bits (86), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 28/121 (23%), Positives = 50/121 (41%)
Query: 2 ISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAI 61
++ CR E +L +K DVV ++ A C + V R+L + +
Sbjct: 126 LNLLCRQNRLETALELFHSMPSKGRDPDVVSYTIIIDALCNAKRFDEAAKVWRRLIDKGL 185
Query: 62 SPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEALS 121
SPDY L+ C LAY +V + + G + + ++LI +M +A+
Sbjct: 186 SPDYKACVALVVGLCSGGRVDLAYELVVGVIKGGVKVNSLVYNALIDGFCRMGRVDKAMK 245
Query: 122 V 122
+
Sbjct: 246 I 246
>gi|357499719|ref|XP_003620148.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|217074978|gb|ACJ85849.1| unknown [Medicago truncatula]
gi|355495163|gb|AES76366.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 465
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/127 (22%), Positives = 58/127 (45%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C+ + L + +K +VV ++++ + G ++ + + K+
Sbjct: 233 IIDGMCKDKHVNDAFDLYSEMVSKGISPNVVTYSALISGFFTVGKLKDAVDLFNKMISEN 292
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
I PD TF+IL+ FCK A + + +MH +G P SS++ L K +A+
Sbjct: 293 IKPDVYTFNILVDVFCKSGKISYALKLVDEMHDRGQPPNIVTYSSILDALCKTHRVDKAV 352
Query: 121 SVYNMLR 127
++ L+
Sbjct: 353 ALLTKLK 359
Score = 42.4 bits (98), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 24/97 (24%), Positives = 46/97 (47%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ FC+SG +L + + ++V +S+L A C+T ++ + ++ KL +
Sbjct: 303 LVDVFCKSGKISYALKLVDEMHDRGQPPNIVTYSSILDALCKTHRVDKAVALLTKLKDQG 362
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQ 97
I P+ +T+ ILI C A D+ KG+
Sbjct: 363 IRPNMHTYTILIDGLCTSGKLEDARNIFEDLLVKGYD 399
Score = 41.6 bits (96), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 26/127 (20%), Positives = 58/127 (45%), Gaps = 6/127 (4%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C G + A +++ + +++ C+ G+ + + ++R++D
Sbjct: 163 LIKGLCLKGQIHQALNFHDKLVALGFQFNQISYGTLIDGLCKVGETRAALDLLRRVDGKL 222
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLI---FHLGKMRAHS 117
+ P+ + +I CK+K A+ +M KG P S+LI F +GK++
Sbjct: 223 VQPNVVMYSTIIDGMCKDKHVNDAFDLYSEMVSKGISPNVVTYSALISGFFTVGKLK--- 279
Query: 118 EALSVYN 124
+A+ ++N
Sbjct: 280 DAVDLFN 286
>gi|215768057|dbj|BAH00286.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 506
Score = 47.4 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 23/82 (28%), Positives = 42/82 (51%)
Query: 31 VLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYMLAYRTMVD 90
V+ N+++ YC+TG++E ++ I PD+ T++ LI CK + A +++
Sbjct: 191 VIYNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLME 250
Query: 91 MHRKGHQPEEELCSSLIFHLGK 112
M G P E ++LI G+
Sbjct: 251 MQDNGVNPTVETFNTLIDAYGR 272
Score = 40.8 bits (94), Expect = 0.16, Method: Composition-based stats.
Identities = 36/173 (20%), Positives = 77/173 (44%), Gaps = 22/173 (12%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ C++ + L + + V N+++ AY RTG +E V+ ++ E
Sbjct: 231 LINGLCKAERITNAQDLLMEMQDNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENG 290
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLI------------- 107
+ P+ ++ ++ FCK A + DM K P ++ +++I
Sbjct: 291 LKPNVVSYGSIVNAFCKNGKIPEAVAILDDMFHKDVLPNAQVYNAIIDAYVEHGPNDQAF 350
Query: 108 FHLGKMRAH--SEALSVYNMLRYSKRSMCKALH----EKILHILISGKLLKDA 154
+ KM+++ S ++ YN+L + +C E+I++ L + +L+ DA
Sbjct: 351 ILVEKMKSNGISPSIVTYNLL---IKGLCNQSQISEAEEIINSLSNHRLIPDA 400
Score = 39.3 bits (90), Expect = 0.60, Method: Composition-based stats.
Identities = 17/98 (17%), Positives = 47/98 (47%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ +C++G E G ++++ K D + N+++ C+ + + ++ ++ +
Sbjct: 196 LINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQDNG 255
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQP 98
++P TF+ LI + + + + +M G +P
Sbjct: 256 VNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKP 293
>gi|222615488|gb|EEE51620.1| hypothetical protein OsJ_32898 [Oryza sativa Japonica Group]
Length = 822
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/107 (26%), Positives = 48/107 (44%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I FC G L + + DVV +++ G + + V K+ E
Sbjct: 385 LIHGFCMRGELMAASDLLMEMMGRGHTPDVVTFGALIHGLVVAGKVSEALIVREKMTERQ 444
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLI 107
+ PD N +++LI CK+ M A + +M K QP+E + ++LI
Sbjct: 445 VFPDVNIYNVLISGLCKKHMLPAAKNILEEMLEKNVQPDEFVYATLI 491
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 39/151 (25%), Positives = 71/151 (47%), Gaps = 10/151 (6%)
Query: 1 MISAFCRSGCFEETKQ---LAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLD 57
+I A C+ C+ T+ L F + D D++ N+++ C G + H +R+
Sbjct: 315 VIDALCK--CWSATQAMVILKQMFASGCDP-DIITFNTLITGLCHEGHVRKAEHFLREAI 371
Query: 58 ELAISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHS 117
++P+ ++ LI FC M A +++M +GH P+ +LI L S
Sbjct: 372 RRELNPNQLSYTPLIHGFCMRGELMAASDLLMEMMGRGHTPDVVTFGALIHGLVVAGKVS 431
Query: 118 EALSVYNMLRYSKRSMCKALHEKILHILISG 148
EAL V + ++R + ++ I ++LISG
Sbjct: 432 EALIVRE--KMTERQVFPDVN--IYNVLISG 458
Score = 44.7 bits (104), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 29/107 (27%), Positives = 51/107 (47%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I F RS + +++ E K + D+V N+M+ YC+ G M + M + ++
Sbjct: 490 LIDGFIRSENLGDARKIFEFMEHKGVRPDIVSCNAMIKGYCQFGMMSEAILCMSNMRKVG 549
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLI 107
PD T+ +I + K+ A R + DM ++ +P SSLI
Sbjct: 550 CIPDEFTYTTVISGYAKQGNLNGALRWLCDMIKRKCKPNVVTYSSLI 596
Score = 41.2 bits (95), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 46/95 (48%), Gaps = 3/95 (3%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+IS + + G + D + K +VV +S++ YC+TGD +S + + A
Sbjct: 560 VISGYAKQGNLNGALRWLCDMIKRKCKPNVVTYSSLINGYCKTGDTDSAEGLFANMQAEA 619
Query: 61 ISPDYNTFHILIKYFCKEKMYMLA---YRTMVDMH 92
+SP+ T+ ILI K+ + A + TM+ H
Sbjct: 620 LSPNVVTYTILIGSLFKKDKVLRAGLYFETMLLNH 654
Score = 38.5 bits (88), Expect = 1.00, Method: Compositional matrix adjust.
Identities = 29/125 (23%), Positives = 57/125 (45%), Gaps = 6/125 (4%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDK---YDVVLLNSMLCAYCRTGDMESVMHVMRKLD 57
++ C G EE +L EA++ VV N ++ YCR GDM + ++ +++
Sbjct: 210 LVRGLCLEGRVEEGLKL---IEARWGAGCIPHVVFYNVLIDGYCRRGDMGRGLLLLGEME 266
Query: 58 ELAISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHS 117
P T+ LI K+ ++M ++G P ++ +S+I L K + +
Sbjct: 267 AKGFLPTLVTYGSLINCLGKKGDLEKIGSLFLEMRKRGLSPNVQIYNSVIDALCKCWSAT 326
Query: 118 EALSV 122
+A+ +
Sbjct: 327 QAMVI 331
Score = 37.4 bits (85), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 26/110 (23%), Positives = 48/110 (43%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I +CR G L G+ EAK +V S++ + GD+E + + ++ +
Sbjct: 245 LIDGYCRRGDMGRGLLLLGEMEAKGFLPTLVTYGSLINCLGKKGDLEKIGSLFLEMRKRG 304
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHL 110
+SP+ ++ +I CK A + M G P+ ++LI L
Sbjct: 305 LSPNVQIYNSVIDALCKCWSATQAMVILKQMFASGCDPDIITFNTLITGL 354
>gi|77552391|gb|ABA95188.1| salt-inducible protein, putative [Oryza sativa Japonica Group]
Length = 938
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/126 (22%), Positives = 56/126 (44%)
Query: 2 ISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAI 61
+ +C++G E +L + + D + ++ YC G+M++ V ++ + I
Sbjct: 524 MDTYCKNGNMNEAVKLLNEMKYGGLTPDKIHYTCLISGYCLKGEMQNAQQVFEEMLKANI 583
Query: 62 SPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEALS 121
PD T++IL FCK + M + + M +G +P I + SEA
Sbjct: 584 EPDIVTYNILASGFCKSGLVMEVFDLLDRMADQGLEPNSLTYGIAIVGFCRGGNLSEAEV 643
Query: 122 VYNMLR 127
++N++
Sbjct: 644 LFNVVE 649
Score = 37.4 bits (85), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 17/77 (22%), Positives = 39/77 (50%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+IS +C G + +Q+ + + D+V N + +C++G + V ++ ++ +
Sbjct: 558 LISGYCLKGEMQNAQQVFEEMLKANIEPDIVTYNILASGFCKSGLVMEVFDLLDRMADQG 617
Query: 61 ISPDYNTFHILIKYFCK 77
+ P+ T+ I I FC+
Sbjct: 618 LEPNSLTYGIAIVGFCR 634
Score = 36.2 bits (82), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 17/80 (21%), Positives = 38/80 (47%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+IS +C++G ++ D + DV++ ++ YC+ G ++ + ++ L
Sbjct: 733 LISIYCQNGDMDKAHLWFHDMVQRGLSVDVIVYTILMNGYCKAGRLQEACQLFVQMTNLG 792
Query: 61 ISPDYNTFHILIKYFCKEKM 80
I PD + +L+ KE +
Sbjct: 793 IKPDVIAYTVLLDGHLKETL 812
>gi|242038895|ref|XP_002466842.1| hypothetical protein SORBIDRAFT_01g015050 [Sorghum bicolor]
gi|241920696|gb|EER93840.1| hypothetical protein SORBIDRAFT_01g015050 [Sorghum bicolor]
Length = 1090
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/115 (24%), Positives = 53/115 (46%), Gaps = 6/115 (5%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I FC+ G + KQ+ DVV ++++ CR M ++ ++ +
Sbjct: 370 LIDGFCQVGEISKAKQILKSMLEDGIDPDVVTYSALINGMCRMAKMHETKEILSRMQKSG 429
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRA 115
I P+ + LI Y+CK +A + VD++R+G L ++ + H +RA
Sbjct: 430 ILPNDVLYTTLICYYCKAGYVKVALKHFVDIYRRG------LVANPVIHNALLRA 478
Score = 40.0 bits (92), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 20/78 (25%), Positives = 38/78 (48%)
Query: 30 VVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYMLAYRTMV 89
V +M+ YCR ++ + V+ +++ + P T+ L+ +CK M A MV
Sbjct: 294 VATYTTMIDGYCRNRRIDKALSVLSEMEITGVMPSELTYSALLNGYCKVSMLGPALDLMV 353
Query: 90 DMHRKGHQPEEELCSSLI 107
D+ +G + +C+ LI
Sbjct: 354 DLKSRGITINKTMCTILI 371
Score = 38.1 bits (87), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 27/120 (22%), Positives = 53/120 (44%), Gaps = 3/120 (2%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ C+ G + KQ D N++L C+ G ++ + + K+ +
Sbjct: 545 LLRGLCQGGHLVQAKQFMFCLLDIPSAVDEKTFNALLLGICKYGTLDEALDICEKMVKNN 604
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHL---GKMRAHS 117
PD +T+ IL+ FC++ + A + M KG P+ + L+ L G+++A S
Sbjct: 605 CLPDIHTYTILLSGFCRKGKILPALVMLQMMLEKGVVPDTVAYTCLLNGLINEGQVKAAS 664
Score = 37.4 bits (85), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 19/107 (17%), Positives = 46/107 (42%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+++ +C+ L D +++ + + ++ +C+ G++ +++ + E
Sbjct: 335 LLNGYCKVSMLGPALDLMVDLKSRGITINKTMCTILIDGFCQVGEISKAKQILKSMLEDG 394
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLI 107
I PD T+ LI C+ + M + G P + L ++LI
Sbjct: 395 IDPDVVTYSALINGMCRMAKMHETKEILSRMQKSGILPNDVLYTTLI 441
>gi|15220166|ref|NP_178170.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75264854|sp|Q9M8M3.1|PP136_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g80550, mitochondrial; Flags: Precursor
gi|6730729|gb|AAF27119.1|AC018849_7 unknown protein; 31926-33272 [Arabidopsis thaliana]
gi|332198297|gb|AEE36418.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 448
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/128 (28%), Positives = 64/128 (50%), Gaps = 4/128 (3%)
Query: 6 CRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDY 65
C+SG + +L + +++ K DVV N+++ A + +E + V R++ E P+
Sbjct: 235 CKSGKPWKAVKLYKEMKSRRMKLDVVAYNTVIRAIGASQGVEFGIRVFREMRERGCEPNV 294
Query: 66 NTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVYN- 124
T + +IK C++ AYR + +M ++G QP+ L L K SE LS++
Sbjct: 295 ATHNTIIKLLCEDGRMRDAYRMLDEMPKRGCQPDSITYMCLFSRLEK---PSEILSLFGR 351
Query: 125 MLRYSKRS 132
M+R R
Sbjct: 352 MIRSGVRP 359
>gi|307135890|gb|ADN33755.1| pentatricopeptide repeat-containing protein [Cucumis melo subsp.
melo]
Length = 566
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/140 (24%), Positives = 61/140 (43%), Gaps = 1/140 (0%)
Query: 12 EETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHIL 71
+E +L + AK + ++V N +L C+ G E + + R+L SP+ +++IL
Sbjct: 219 DEASKLLDEIIAKGGEPNLVSYNVLLTGLCKEGRTEDAIRLFRELPSKGFSPNVVSYNIL 278
Query: 72 IKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVY-NMLRYSK 130
++ C E + A + +M+ P + LI L AL V M+R
Sbjct: 279 LRSLCNEGRWEEANVLLAEMNGDERSPSTVTYNILIGSLALHGRTEHALEVLEEMIRARF 338
Query: 131 RSMCKALHEKILHILISGKL 150
+ + + I H+ GKL
Sbjct: 339 KPTASSYNPIIAHLCKDGKL 358
Score = 38.5 bits (88), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 28/125 (22%), Positives = 51/125 (40%), Gaps = 1/125 (0%)
Query: 2 ISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAI 61
I+ C G +E + K ++ + CR G+ ++ ++ +
Sbjct: 383 IATLCEEGMVQEAFSIIQSLGNKQHSSTQEFYKIVITSLCRKGNTYPAFQLLYEMTKYGF 442
Query: 62 SPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEALS 121
+PD T+ LI+ C E M A M + ++P+ E +SLI K R AL
Sbjct: 443 TPDSFTYSSLIRGLCMEGMLNEAIEIFSVME-ENNKPDTENYNSLILGCCKSRRTDLALD 501
Query: 122 VYNML 126
V+ ++
Sbjct: 502 VFEIM 506
Score = 37.7 bits (86), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 22/98 (22%), Positives = 46/98 (46%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++S+ CR G QL E + V NS++ C G++ + ++ +L +
Sbjct: 138 LVSSLCRKGNVGYAMQLVDKMEEYGYPTNTVTYNSLVRGLCMHGNLTQSLQLLDRLIQKG 197
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQP 98
+ P+ T+ L++ KE+ A + + ++ KG +P
Sbjct: 198 LVPNAYTYSFLLEAAYKERGADEASKLLDEIIAKGGEP 235
>gi|255584314|ref|XP_002532893.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223527353|gb|EEF29498.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 625
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/98 (27%), Positives = 46/98 (46%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ C G + +L + K + D V N+++ AYC+ GDM+S + V ++ E
Sbjct: 344 ILRKLCEIGRIRDANKLLNEMSEKKIEPDNVTCNTLINAYCKIGDMKSALKVKNRMVEAG 403
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQP 98
+ D T+ LI FCK + A ++ M G P
Sbjct: 404 LKLDQFTYKALIHGFCKIREMDGAKELLLSMLDAGFSP 441
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 41/78 (52%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I A C+SG E+ L + E+K D+ N+++ YC+ G + V +++
Sbjct: 206 LIHACCKSGDVEKADNLLSEMESKCVFPDLFTYNTLISLYCKKGMHYEALSVQDRMEREG 265
Query: 61 ISPDYNTFHILIKYFCKE 78
I PD T++ LI FCKE
Sbjct: 266 IKPDIVTYNSLIHGFCKE 283
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 54/97 (55%), Gaps = 6/97 (6%)
Query: 34 NSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHR 93
N ++ A C++GD+E +++ +++ + PD T++ LI +CK+ M+ A M R
Sbjct: 204 NVLIHACCKSGDVEKADNLLSEMESKCVFPDLFTYNTLISLYCKKGMHYEALSVQDRMER 263
Query: 94 KGHQPEEELCSSLIFHL---GKMRAHSEALSVYNMLR 127
+G +P+ +SLI G+MR EA+ ++ +R
Sbjct: 264 EGIKPDIVTYNSLIHGFCKEGRMR---EAMRLFKEIR 297
Score = 44.3 bits (103), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 30/124 (24%), Positives = 61/124 (49%), Gaps = 5/124 (4%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+IS +C+ G E + E + K D+V NS++ +C+ G M M + +++ +
Sbjct: 241 LISLYCKKGMHYEALSVQDRMEREGIKPDIVTYNSLIHGFCKEGRMREAMRLFKEIRD-- 298
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHL---GKMRAHS 117
+P++ T+ LI +C+ A R +M +G P +S++ L G++R +
Sbjct: 299 ATPNHVTYTTLIDGYCRLNDLDQALRLREEMEAQGLYPTVVTYNSILRKLCEIGRIRDAN 358
Query: 118 EALS 121
+ L+
Sbjct: 359 KLLN 362
Score = 42.7 bits (99), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 26/124 (20%), Positives = 56/124 (45%), Gaps = 2/124 (1%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I FC+ G E +L + + V +++ YCR D++ + + +++
Sbjct: 276 LIHGFCKEGRMREAMRLFKEIRDATPNH--VTYTTLIDGYCRLNDLDQALRLREEMEAQG 333
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ P T++ +++ C+ A + + +M K +P+ C++LI K+ AL
Sbjct: 334 LYPTVVTYNSILRKLCEIGRIRDANKLLNEMSEKKIEPDNVTCNTLINAYCKIGDMKSAL 393
Query: 121 SVYN 124
V N
Sbjct: 394 KVKN 397
>gi|414887654|tpg|DAA63668.1| TPA: hypothetical protein ZEAMMB73_339081 [Zea mays]
Length = 1098
Score = 47.4 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 21/95 (22%), Positives = 49/95 (51%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ +C+ G E+ +L + + ++ + N M+ YC+ G M +++ ++ +
Sbjct: 355 VINGYCQMGRMEDAARLLNEMVDSRLQVNLFVYNIMINGYCKLGRMVEAHNILHEMTGVG 414
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKG 95
+ PD +++ L+ +CK+ + A+ T M R G
Sbjct: 415 VRPDTYSYNSLVDGYCKKGLMNKAFETYNTMLRNG 449
Score = 41.6 bits (96), Expect = 0.11, Method: Composition-based stats.
Identities = 30/123 (24%), Positives = 51/123 (41%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
MI+ +C+ G E + + + D NS++ YC+ G M +
Sbjct: 390 MINGYCKLGRMVEAHNILHEMTGVGVRPDTYSYNSLVDGYCKKGLMNKAFETYNTMLRNG 449
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ T++ L+K FC A R M +KG P E CS+L+ K +AL
Sbjct: 450 FAATTLTYNALLKGFCSLGSIDDALRLWFLMLKKGIAPNEISCSTLLDGFFKSGKTEKAL 509
Query: 121 SVY 123
+++
Sbjct: 510 NLW 512
Score = 40.4 bits (93), Expect = 0.25, Method: Composition-based stats.
Identities = 25/98 (25%), Positives = 47/98 (47%)
Query: 29 DVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYMLAYRTM 88
++V NS++ C++G++ + + +KL ISP+ T++ LI CK+ A++
Sbjct: 794 NIVTYNSLIYGLCKSGELSRAVSLFKKLWTKGISPNAITYNTLIDKHCKDGYITEAFKLK 853
Query: 89 VDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVYNML 126
M +G P S LI L EA+ + + +
Sbjct: 854 QRMIEEGIHPTVFTYSILINGLCTQGYMEEAIKLLDQM 891
Score = 40.4 bits (93), Expect = 0.26, Method: Composition-based stats.
Identities = 29/142 (20%), Positives = 53/142 (37%), Gaps = 35/142 (24%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ C+ E ++L + D++ ++ YC+ GDM+ ++ +L+ L
Sbjct: 530 VINGLCKIERMPEAEELVDKMKQWRCPPDIITYRTLFSGYCKIGDMDRASRILNELENLG 589
Query: 61 -----------------------------------ISPDYNTFHILIKYFCKEKMYMLAY 85
+SP+ + LI +CKE AY
Sbjct: 590 FAPTIEFFNSLITGHFIAKQHGKVNDILFEMSNRGLSPNTVAYGALIAGWCKEGDLHTAY 649
Query: 86 RTMVDMHRKGHQPEEELCSSLI 107
++M KG P +CSSL+
Sbjct: 650 NLYLEMIEKGLVPNLFICSSLV 671
Score = 37.7 bits (86), Expect = 1.4, Method: Composition-based stats.
Identities = 27/129 (20%), Positives = 60/129 (46%), Gaps = 2/129 (1%)
Query: 1 MISAFCRSGCFEETKQLAGDF-EAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDEL 59
++ +C EE + + + + K D + +++ YC+ G ME ++ ++ +
Sbjct: 319 LVKGYCNEKNMEEAEGVVQEIRKNKQLVVDEAVFGAVINGYCQMGRMEDAARLLNEMVDS 378
Query: 60 AISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEA 119
+ + ++I+I +CK + A+ + +M G +P+ +SL+ K ++A
Sbjct: 379 RLQVNLFVYNIMINGYCKLGRMVEAHNILHEMTGVGVRPDTYSYNSLVDGYCKKGLMNKA 438
Query: 120 LSVYN-MLR 127
YN MLR
Sbjct: 439 FETYNTMLR 447
>gi|357150734|ref|XP_003575558.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g15980-like [Brachypodium distachyon]
Length = 477
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/121 (23%), Positives = 53/121 (43%)
Query: 2 ISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAI 61
++AFC E+ + L + + DV N+M+ YC G++ + + ++ I
Sbjct: 267 MAAFCDGREMEKARGLWDEMVNGGIQPDVTAYNTMIGGYCGAGEVGMAEEMFKDMEICGI 326
Query: 62 SPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEALS 121
P TF L++ C+ A DM R+G E+ ++ L + R +EAL
Sbjct: 327 EPSVTTFEWLVRGHCRAGDVDAAMLVRSDMRRRGFGIGAEVVEEVVDGLCQNRRVAEALG 386
Query: 122 V 122
+
Sbjct: 387 I 387
>gi|357125724|ref|XP_003564540.1| PREDICTED: pentatricopeptide repeat-containing protein At5g39980,
chloroplastic-like [Brachypodium distachyon]
Length = 652
Score = 47.4 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 31/132 (23%), Positives = 60/132 (45%), Gaps = 1/132 (0%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+++A R+G + EA D+VL ++++ R GD + + +L
Sbjct: 159 LLAALTRAGHLDHALTFLPLMEADAVSPDLVLFSNLIHLALRGGDAPRALALFSRLRAAG 218
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMV-DMHRKGHQPEEELCSSLIFHLGKMRAHSEA 119
I PD ++ I +CK + A R ++ D+ G P+ E S ++ L + H A
Sbjct: 219 IRPDLKAYNAAIAAYCKSDLLRDAKRLLLHDIPADGVAPDAESYSPILAALARRGRHLAA 278
Query: 120 LSVYNMLRYSKR 131
+S+++ +R R
Sbjct: 279 VSLFSHMRAVAR 290
>gi|302762244|ref|XP_002964544.1| hypothetical protein SELMODRAFT_82221 [Selaginella moellendorffii]
gi|300168273|gb|EFJ34877.1| hypothetical protein SELMODRAFT_82221 [Selaginella moellendorffii]
Length = 528
Score = 47.4 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 25/98 (25%), Positives = 47/98 (47%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I +CR+G +E +L G DVV +++ A+C+ G ++ + +++
Sbjct: 252 LIGGYCRAGDMDEAIRLLGKMVDDKCAPDVVTYTTLMSAFCKMGRLDDAYELFQQMVANK 311
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQP 98
+SPD TF L+ C E A + ++ R+G P
Sbjct: 312 LSPDVVTFTSLVDGLCGEGRMEDALELLEEITRRGCPP 349
Score = 43.9 bits (102), Expect = 0.021, Method: Composition-based stats.
Identities = 23/98 (23%), Positives = 43/98 (43%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++SAFC+ G ++ +L A DVV S++ C G ME + ++ ++
Sbjct: 287 LMSAFCKMGRLDDAYELFQQMVANKLSPDVVTFTSLVDGLCGEGRMEDALELLEEITRRG 346
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQP 98
P T++ ++ +CK A + D +G P
Sbjct: 347 CPPTIYTYNCVVDGYCKANQVRKAEELVADFRSRGFVP 384
Score = 43.5 bits (101), Expect = 0.027, Method: Composition-based stats.
Identities = 27/107 (25%), Positives = 47/107 (43%), Gaps = 3/107 (2%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C++G + + FE + NS++ YCR GDM+ + ++ K+ +
Sbjct: 220 VIDGLCKAGRLRDAVDI---FEEMSCAPTAITYNSLIGGYCRAGDMDEAIRLLGKMVDDK 276
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLI 107
+PD T+ L+ FCK AY M P+ +SL+
Sbjct: 277 CAPDVVTYTTLMSAFCKMGRLDDAYELFQQMVANKLSPDVVTFTSLV 323
Score = 37.0 bits (84), Expect = 2.4, Method: Composition-based stats.
Identities = 26/123 (21%), Positives = 51/123 (41%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ C+ +E L + VV NS++ +CR ++ M ++
Sbjct: 115 LVDGLCKCERLDEAVALVETMAERGCAPTVVTYNSIITGFCRARRVDEAHGFMEQMVAEG 174
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
PD T+ LI FCK + + ++ R+G P+ S++I L K +A+
Sbjct: 175 CHPDIITYTALIGGFCKSRDVGRGLELLGEVTRRGFTPDIVTYSTVIDGLCKAGRLRDAV 234
Query: 121 SVY 123
++
Sbjct: 235 DIF 237
>gi|357515141|ref|XP_003627859.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355521881|gb|AET02335.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 731
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/99 (25%), Positives = 44/99 (44%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ C G + +L + + + D V N+++ AYC+ GD+ S + K+ E
Sbjct: 344 ILRKLCSDGRIRDANKLLHEMSERKVQADSVTCNTLINAYCKIGDLNSALKFKTKMLEAG 403
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPE 99
++P+ T+ LI FCK A + M G P
Sbjct: 404 LTPNSFTYKALIHGFCKTSELESAKELLFGMLDAGFSPN 442
Score = 37.0 bits (84), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 38/154 (24%), Positives = 64/154 (41%), Gaps = 2/154 (1%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I A +S E + + + E K D+ N+++ YC+ G + V K++
Sbjct: 206 LIHACSKSRDVERAEFILNEMEVKGVVPDIFTYNTLIALYCKKGLHYEALSVQDKMEREG 265
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
I+ D +++ LI FCKE A R ++ K P ++LI K EAL
Sbjct: 266 INLDIVSYNSLIYGFCKEGKMREAMRMFGEI--KDAIPNHVTYTTLIDGYCKANEFEEAL 323
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLKDA 154
+ M+ + IL L S ++DA
Sbjct: 324 RLREMMVAKGLYPGVVTYNSILRKLCSDGRIRDA 357
Score = 35.8 bits (81), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 24/102 (23%), Positives = 53/102 (51%), Gaps = 6/102 (5%)
Query: 29 DVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYMLAYRTM 88
++ + N ++ A ++ D+E ++ +++ + PD T++ LI +CK+ ++ A
Sbjct: 199 NIYVYNCLIHACSKSRDVERAEFILNEMEVKGVVPDIFTYNTLIALYCKKGLHYEALSVQ 258
Query: 89 VDMHRKGHQPEEELCSSLIFHL---GKMRAHSEALSVYNMLR 127
M R+G + +SLI+ GKMR EA+ ++ ++
Sbjct: 259 DKMEREGINLDIVSYNSLIYGFCKEGKMR---EAMRMFGEIK 297
>gi|357449533|ref|XP_003595043.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355484091|gb|AES65294.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1070
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 40/76 (52%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ A + G E+ +L D E +Y K+D ++S++ YC+ GDME + K
Sbjct: 825 LLVATSKIGQLEKAFELLNDMEKQYIKFDNFTVSSVINCYCQKGDMEGALEFYYKFKGKD 884
Query: 61 ISPDYNTFHILIKYFC 76
ISPD+ F +I+ C
Sbjct: 885 ISPDFLGFLYMIRGLC 900
Score = 40.4 bits (93), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 28/124 (22%), Positives = 51/124 (41%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C+ G + L E K ++V+ NS++ C G + + L++L
Sbjct: 720 VIHGLCKGGYLNKALDLCTLIEKKGVNLNIVIYNSIINGLCHDGCLIEAFRLFDSLEKLN 779
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ T+ LI C+E A M G QP+ ++ +SL+ K+ +A
Sbjct: 780 LMTSEITYATLIYALCREGYLQDAEHVFKKMVLNGFQPKTQVYNSLLVATSKIGQLEKAF 839
Query: 121 SVYN 124
+ N
Sbjct: 840 ELLN 843
Score = 39.3 bits (90), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 35/148 (23%), Positives = 64/148 (43%), Gaps = 4/148 (2%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+++A C+ G +E L E DVVL + +C Y + V MR++ E
Sbjct: 204 VVNALCKLGRVDEVCGLVRKMEEDGLDLDVVLYSVWVCGYVEEKVLVEVFRKMREMVEKG 263
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
I D+ ++ ILI F K ++ + M ++G P + ++++ K EA
Sbjct: 264 ICHDFVSYTILIDGFSKLGDVEKSFTFLAKMIKEGIIPNKVTYTAIMSAYCKKGRIEEAF 323
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISG 148
++ + + M L E + +LI G
Sbjct: 324 GLFVRM----KDMGIELDEFVFVVLIDG 347
Score = 38.9 bits (89), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 29/131 (22%), Positives = 59/131 (45%), Gaps = 5/131 (3%)
Query: 31 VLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYMLAYRTMVD 90
V +++ AYC+ G +E + ++ ++ I D F +LI F + + ++ +V+
Sbjct: 304 VTYTAIMSAYCKKGRIEEAFGLFVRMKDMGIELDEFVFVVLIDGFGRVGDFDRVFQLLVE 363
Query: 91 MHRKGHQPEEELCSSLIFHLGKMRAHSEALSVYNMLRYSKRSMCKALH-----EKILHIL 145
M ++G P ++++ L K EA + + LH + +L IL
Sbjct: 364 MEKRGIGPNVVTYNAVVNGLSKYGRTQEADEFSKNVTADVVTYSTLLHGYTEEDNVLGIL 423
Query: 146 ISGKLLKDAYI 156
+ K L++A I
Sbjct: 424 QTKKRLEEAGI 434
Score = 38.5 bits (88), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 23/95 (24%), Positives = 51/95 (53%), Gaps = 2/95 (2%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++SAF R+G E + +F + ++V +++ A C+ G ++ V ++RK++E
Sbjct: 171 VVSAFSRAGKPELSLWFFDNFMGS--RPNLVTYTAVVNALCKLGRVDEVCGLVRKMEEDG 228
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKG 95
+ D + + + + +EK+ + +R M +M KG
Sbjct: 229 LDLDVVLYSVWVCGYVEEKVLVEVFRKMREMVEKG 263
>gi|6633861|gb|AAF19720.1|AC008047_27 F2K11.2 [Arabidopsis thaliana]
Length = 332
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/110 (20%), Positives = 55/110 (50%), Gaps = 6/110 (5%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ +C++ + ++ + + + V +++ +C+ GD+++ ++ ++
Sbjct: 201 LINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCG 260
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHL 110
++PDY TFH ++ C +K A+ + D+ + E+C LIF L
Sbjct: 261 VAPDYITFHCMLAGLCSKKELRKAFAILEDLQKS------EVCPRLIFFL 304
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 29/123 (23%), Positives = 56/123 (45%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
MI +FC SG + + QL K D+V ++++ A+ + + + +++ +
Sbjct: 96 MIDSFCHSGRWSDADQLLRHMIEKQINPDIVTFSALINAFVKERKVSEAEEIYKEMLRWS 155
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
I P T++ +I FCK+ A R + M KG P+ S+LI K + +
Sbjct: 156 IFPTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGM 215
Query: 121 SVY 123
++
Sbjct: 216 EIF 218
Score = 38.5 bits (88), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 18/66 (27%), Positives = 30/66 (45%)
Query: 30 VVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYMLAYRTMV 89
+ NSM+ +C+ ++ ++ + SPD TF LI +CK K
Sbjct: 160 TITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFC 219
Query: 90 DMHRKG 95
+MHR+G
Sbjct: 220 EMHRRG 225
Score = 38.1 bits (87), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 21/79 (26%), Positives = 37/79 (46%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ C+ G + L + K +V+ N M+ ++C +G ++R + E
Sbjct: 61 IVDRLCKDGNHINAQNLFTEMHEKGIFPNVLTYNCMIDSFCHSGRWSDADQLLRHMIEKQ 120
Query: 61 ISPDYNTFHILIKYFCKEK 79
I+PD TF LI F KE+
Sbjct: 121 INPDIVTFSALINAFVKER 139
Score = 36.6 bits (83), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 22/99 (22%), Positives = 45/99 (45%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
MI FC+ ++ K++ +K DVV ++++ YC+ +++ M + ++
Sbjct: 166 MIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRG 225
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPE 99
I + T+ LI FC+ A + +M G P+
Sbjct: 226 IVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPD 264
>gi|413920478|gb|AFW60410.1| hypothetical protein ZEAMMB73_296337 [Zea mays]
Length = 676
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/118 (25%), Positives = 50/118 (42%)
Query: 6 CRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDY 65
CR G FEE L A+ D ++ A+CR G +V + R++ E+ P+
Sbjct: 192 CREGRFEEADALLAAMWAQGFCLDSATCTVVVRAFCRQGRFRNVTDLFRRMSEMGTPPNM 251
Query: 66 NTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVY 123
+ I C+ A+ + +M KG +P +SLI L K+ A ++
Sbjct: 252 VNYSAWIDGLCERGYVKQAFHVLEEMVGKGLKPNVYTHTSLIDGLCKIGWMERAFRLF 309
Score = 38.9 bits (89), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 30/62 (48%), Gaps = 3/62 (4%)
Query: 34 NSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYMLA---YRTMVD 90
SM+ YCR G + S + V ++ + PD T+ LI CKE A + TM+D
Sbjct: 501 TSMIAGYCRLGKLTSALKVFERMVQHGCLPDSITYGALISSLCKESRLEEARALFETMLD 560
Query: 91 MH 92
H
Sbjct: 561 KH 562
Score = 38.1 bits (87), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 30/131 (22%), Positives = 53/131 (40%), Gaps = 11/131 (8%)
Query: 1 MISAFCRSGCFEETKQL------AGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMR 54
+I C+ G E +L + ++ Y V M+ YC+ G + ++
Sbjct: 292 LIDGLCKIGWMERAFRLFLKLVKSSSYKPNVHTYTV-----MIGGYCKEGKLARAEMLLG 346
Query: 55 KLDELAISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMR 114
++ E ++P+ NT+ LI CK + A+ M M +G P +++I K
Sbjct: 347 RMVEQGLAPNTNTYTTLIHGHCKGGSFDRAFELMNKMKLEGFLPNIYTYNAIIGGFCKKG 406
Query: 115 AHSEALSVYNM 125
EA V M
Sbjct: 407 KIQEAYKVLRM 417
>gi|242045792|ref|XP_002460767.1| hypothetical protein SORBIDRAFT_02g034620 [Sorghum bicolor]
gi|241924144|gb|EER97288.1| hypothetical protein SORBIDRAFT_02g034620 [Sorghum bicolor]
Length = 762
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/127 (27%), Positives = 60/127 (47%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+++ FC SG E K+L K + NS++ YC +M+S + + +
Sbjct: 580 LMNGFCMSGRVEGGKKLLEWMLEKNIHPNATTYNSLMKQYCIGNNMKSTTEIYKGMCSRN 639
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ P+ NT++ILIK CK + A +M KG + S+LI L K + EA
Sbjct: 640 VEPNENTYNILIKGHCKARSMKEAQYFHNEMIEKGFRLTASSYSALIRLLNKKKKFVEAR 699
Query: 121 SVYNMLR 127
+++ +R
Sbjct: 700 KLFHDMR 706
Score = 43.1 bits (100), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 17/76 (22%), Positives = 43/76 (56%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ C++G ++ + D +A K DV +++ A C++G+++ +++++ +
Sbjct: 510 LINGLCKAGYLDQAMRTMADMDAAGLKPDVYTYTTLIDALCKSGELDRAHDLLQEMLDNG 569
Query: 61 ISPDYNTFHILIKYFC 76
I P T+++L+ FC
Sbjct: 570 IKPTIVTYNVLMNGFC 585
Score = 43.1 bits (100), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 29/120 (24%), Positives = 54/120 (45%), Gaps = 4/120 (3%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ +C+ G E Q+ + +VV ++ C+ GD+++ ++ ++
Sbjct: 440 LVDGYCKRGKMAEAFQVHNTMVQRGVAPNVVTYTALSDGLCKQGDVQAANELLHEMSNKG 499
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKM----RAH 116
+ + T++ LI CK A RTM DM G +P+ ++LI L K RAH
Sbjct: 500 LELNACTYNSLINGLCKAGYLDQAMRTMADMDAAGLKPDVYTYTTLIDALCKSGELDRAH 559
Score = 42.4 bits (98), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 22/95 (23%), Positives = 40/95 (42%)
Query: 4 AFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISP 63
C+ G + +L + K + + NS++ C+ G ++ M M +D + P
Sbjct: 478 GLCKQGDVQAANELLHEMSNKGLELNACTYNSLINGLCKAGYLDQAMRTMADMDAAGLKP 537
Query: 64 DYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQP 98
D T+ LI CK A+ + +M G +P
Sbjct: 538 DVYTYTTLIDALCKSGELDRAHDLLQEMLDNGIKP 572
Score = 42.0 bits (97), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 22/95 (23%), Positives = 43/95 (45%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ CR+G +E +++ + A+ D V ++ YC+ G M V + +
Sbjct: 405 LINGLCRAGELKEAEKVLQEMLARRLDVDEVTYTVLVDGYCKRGKMAEAFQVHNTMVQRG 464
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKG 95
++P+ T+ L CK+ A + +M KG
Sbjct: 465 VAPNVVTYTALSDGLCKQGDVQAANELLHEMSNKG 499
Score = 39.3 bits (90), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 33/122 (27%), Positives = 58/122 (47%), Gaps = 4/122 (3%)
Query: 21 FEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKM 80
F+ DK +V N +L C G +E + DE+A PD T+ ILI +C
Sbjct: 254 FQGLPDK-NVCSYNILLKVLCGAGRVEDARQL---FDEMASPPDVVTYGILIHGYCALGE 309
Query: 81 YMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVYNMLRYSKRSMCKALHEK 140
A + + DM +G +P + +S++ L S+AL+V + + K + +A++
Sbjct: 310 LENAVKLLDDMVARGVEPNATVYTSVVALLCDKGRVSDALTVVEDMVHHKVILDEAVYTT 369
Query: 141 IL 142
+L
Sbjct: 370 VL 371
Score = 38.5 bits (88), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 29/124 (23%), Positives = 52/124 (41%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I A C+SG + L + K +V N ++ +C +G +E ++ + E
Sbjct: 545 LIDALCKSGELDRAHDLLQEMLDNGIKPTIVTYNVLMNGFCMSGRVEGGKKLLEWMLEKN 604
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
I P+ T++ L+K +C M + +P E + LI K R+ EA
Sbjct: 605 IHPNATTYNSLMKQYCIGNNMKSTTEIYKGMCSRNVEPNENTYNILIKGHCKARSMKEAQ 664
Query: 121 SVYN 124
+N
Sbjct: 665 YFHN 668
Score = 38.1 bits (87), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 20/99 (20%), Positives = 45/99 (45%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++S FC G ++ + + K D V +++ CR G+++ V++++
Sbjct: 370 VLSGFCNKGDLVSARRWFDEMQRKGLATDGVTYTTLINGLCRAGELKEAEKVLQEMLARR 429
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPE 99
+ D T+ +L+ +CK A++ M ++G P
Sbjct: 430 LDVDEVTYTVLVDGYCKRGKMAEAFQVHNTMVQRGVAPN 468
>gi|224135613|ref|XP_002322117.1| predicted protein [Populus trichocarpa]
gi|222869113|gb|EEF06244.1| predicted protein [Populus trichocarpa]
Length = 854
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/107 (28%), Positives = 54/107 (50%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I ++G E+ ++L K K DVV +S + AY + GD+ V+ + +++
Sbjct: 348 LIDGLFKAGRLEDGQRLLLVALDKGIKLDVVGFSSAMDAYVKIGDLGRVIQIYKRMLNEG 407
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLI 107
ISP+ + ILIK FC+ + A V + + G +P S+LI
Sbjct: 408 ISPNVVSCSILIKGFCQNGRILEACGLFVQILKLGFEPSILTYSALI 454
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 35/125 (28%), Positives = 54/125 (43%), Gaps = 1/125 (0%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ R G E L + K DV N+M+C YC ++ + + K+
Sbjct: 628 LINMHSREGHLEAALGLFVHVVERGPKPDVFTFNTMICCYCNFKRLDDAVQLFAKMTSEQ 687
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEA- 119
+ P+ TF ILI FC+E A M +G +P S LI K ++ E+
Sbjct: 688 LRPNAITFTILIDAFCREGRMDDAMLMFSKMLEEGPEPNLVTYSCLIHGYFKSQSMMESG 747
Query: 120 LSVYN 124
L +YN
Sbjct: 748 LKLYN 752
Score = 36.6 bits (83), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 25/128 (19%), Positives = 54/128 (42%), Gaps = 10/128 (7%)
Query: 1 MISAFCRSG-----CFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRK 55
+I FC++G C + L FE Y ++++ +C++G++ ++
Sbjct: 418 LIKGFCQNGRILEACGLFVQILKLGFEPSILTY-----SALIAGFCKSGNLRDGFYLYED 472
Query: 56 LDELAISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRA 115
+ + PD + +LI CK+ + A R +G P ++L+ +++
Sbjct: 473 MIKKRCEPDTIVYSVLINGLCKQGLVGDALRFFFQAVNRGLSPNVFTLNTLLDSFCRLKC 532
Query: 116 HSEALSVY 123
A+ VY
Sbjct: 533 IVGAMKVY 540
>gi|356573388|ref|XP_003554843.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g61360-like [Glycine max]
Length = 491
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/123 (23%), Positives = 58/123 (47%), Gaps = 1/123 (0%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ AFC +E + + ++ + +N +L + +G++ SV ++
Sbjct: 168 LLKAFCTQRQMKEARSVFAKLVPRFSP-NTKSMNILLLGFKESGNVTSVELFYHEMVRRG 226
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
SPD TF+I I +CK+ + A R + +M R+ P E ++LI G +R +A
Sbjct: 227 FSPDGVTFNIRIDAYCKKGCFGDALRLLEEMERRNVVPTIETITTLIHGAGLVRNKDKAW 286
Query: 121 SVY 123
++
Sbjct: 287 QLF 289
Score = 35.8 bits (81), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 20/78 (25%), Positives = 37/78 (47%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+A R+ E L + K + D V ++M + R+ +E V + +K+ +
Sbjct: 307 LITALVRTRDIESASSLMDEMVEKCIELDSVTYHTMFLGFMRSRGIEGVSKLYQKMTQSN 366
Query: 61 ISPDYNTFHILIKYFCKE 78
P T +L+KYFC+
Sbjct: 367 FVPKTRTVVMLMKYFCQN 384
>gi|115474407|ref|NP_001060800.1| Os08g0107700 [Oryza sativa Japonica Group]
gi|113622769|dbj|BAF22714.1| Os08g0107700, partial [Oryza sativa Japonica Group]
Length = 374
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 37/74 (50%)
Query: 34 NSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHR 93
NS+L YC +G + V +++ + PD T++ L+ Y CK M A + M +
Sbjct: 277 NSLLHGYCSSGKPNDAIGVFKRMCRDGVEPDVFTYNTLMGYLCKNGRSMEARKIFDSMVK 336
Query: 94 KGHQPEEELCSSLI 107
+GH+P +L+
Sbjct: 337 RGHKPNSATYGTLL 350
>gi|413948245|gb|AFW80894.1| hypothetical protein ZEAMMB73_865420 [Zea mays]
Length = 573
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/107 (27%), Positives = 47/107 (43%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+++A CR E + E + + DVV N++L YCR G ++ +H+ +
Sbjct: 214 LVAALCRGEDAERAYGFLEELEEQGFEPDVVTYNTLLAGYCRKGRLQDALHLFDVMPHRR 273
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLI 107
+ PD + IL+ CK A R M G +P+ S LI
Sbjct: 274 VPPDLVSHTILMDGLCKAWRLKDARRMFDRMVHGGLRPDAVAYSVLI 320
Score = 40.4 bits (93), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 18/74 (24%), Positives = 36/74 (48%)
Query: 34 NSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHR 93
N ++ +CR + + + V ++ + P+YNT+ LI C+ + MV+M
Sbjct: 422 NMIVDCFCRCDNPKEALDVKVEMTSREVKPNYNTYQTLIICLCRLGKSLSGQSVMVEMIE 481
Query: 94 KGHQPEEELCSSLI 107
P E +C++L+
Sbjct: 482 SDFHPNEAICTALV 495
>gi|15222150|ref|NP_172763.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75200670|sp|Q9SAD9.1|PPR40_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g13040, mitochondrial; Flags: Precursor
gi|4850387|gb|AAD31057.1|AC007357_6 F3F19.6 [Arabidopsis thaliana]
gi|332190841|gb|AEE28962.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 517
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 71/157 (45%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I FCR+ + +L + K +VV S++ A+ R G+ ++ ++ EL
Sbjct: 331 LIETFCRASNTRKAYRLFEEMRQKGMVMNVVTYTSLIKAFLREGNSSVAKKLLDQMTELG 390
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+SPD + ++ + CK AY DM P+ +SLI L + +EA+
Sbjct: 391 LSPDRIFYTTILDHLCKSGNVDKAYGVFNDMIEHEITPDAISYNSLISGLCRSGRVTEAI 450
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLKDAYIV 157
++ ++ + + + I+ LI GK L AY V
Sbjct: 451 KLFEDMKGKECCPDELTFKFIIGGLIRGKKLSAAYKV 487
Score = 40.0 bits (92), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 18/71 (25%), Positives = 35/71 (49%)
Query: 27 KYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYMLAYR 86
K V+ N+++ +C+ G +E + + ++ PD T+++L+ Y+ M A
Sbjct: 217 KLSTVVYNALISGFCKAGRIEKAEALKSYMSKIGCEPDLVTYNVLLNYYYDNNMLKRAEG 276
Query: 87 TMVDMHRKGHQ 97
M +M R G Q
Sbjct: 277 VMAEMVRSGIQ 287
Score = 39.3 bits (90), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 30/126 (23%), Positives = 54/126 (42%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I AF R G K+L D + ++L C++G+++ V + E
Sbjct: 366 LIKAFLREGNSSVAKKLLDQMTELGLSPDRIFYTTILDHLCKSGNVDKAYGVFNDMIEHE 425
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
I+PD +++ LI C+ A + DM K P+E +I L + + S A
Sbjct: 426 ITPDAISYNSLISGLCRSGRVTEAIKLFEDMKGKECCPDELTFKFIIGGLIRGKKLSAAY 485
Query: 121 SVYNML 126
V++ +
Sbjct: 486 KVWDQM 491
Score = 37.7 bits (86), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 23/103 (22%), Positives = 42/103 (40%)
Query: 5 FCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPD 64
C+SG ++ + D D + NS++ CR+G + + + + PD
Sbjct: 405 LCKSGNVDKAYGVFNDMIEHEITPDAISYNSLISGLCRSGRVTEAIKLFEDMKGKECCPD 464
Query: 65 YNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLI 107
TF +I + K AY+ M KG + ++ +LI
Sbjct: 465 ELTFKFIIGGLIRGKKLSAAYKVWDQMMDKGFTLDRDVSDTLI 507
>gi|413937324|gb|AFW71875.1| hypothetical protein ZEAMMB73_225396 [Zea mays]
Length = 818
Score = 47.0 bits (110), Expect = 0.002, Method: Composition-based stats.
Identities = 32/124 (25%), Positives = 52/124 (41%), Gaps = 3/124 (2%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C C ++ +L D ++ K D+V N++L C E +M +
Sbjct: 537 IIDGLCNESCIDDAMELLSDLQSCGCKPDIVTFNTLLKGLCGVDRWEDAEQLMANMMRSN 596
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHL---GKMRAHS 117
PD TF+ +I C++ + A T+ M G P S ++ L GK +A
Sbjct: 597 CPPDELTFNTVITSLCQKGLLTQAIETLKIMAENGCVPNSSTYSIVVDALLKAGKAQAAL 656
Query: 118 EALS 121
E LS
Sbjct: 657 ELLS 660
Score = 45.8 bits (107), Expect = 0.006, Method: Composition-based stats.
Identities = 26/99 (26%), Positives = 45/99 (45%), Gaps = 3/99 (3%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
M++ +CR+G E+ ++L D + N ++ A C G + + V +
Sbjct: 225 MVNGYCRAGRIEDARRLINGMPFPPDTFT---FNPLIRALCVRGRIPDALAVFDDMLHRG 281
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPE 99
SP T+ IL+ CKE Y A + +M KG +P+
Sbjct: 282 CSPSVVTYSILLDATCKESGYRQAMALLDEMRAKGCEPD 320
Score = 44.3 bits (103), Expect = 0.016, Method: Composition-based stats.
Identities = 24/126 (19%), Positives = 56/126 (44%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ A C+ + + L + AK + D+V N ++ A C GD++ ++++ L
Sbjct: 292 LLDATCKESGYRQAMALLDEMRAKGCEPDIVTYNVLINAMCNEGDVDEALNILSNLPSHG 351
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
PD T+ ++K C + + + +M P+E ++++ L + A+
Sbjct: 352 CKPDAVTYTPVLKSLCGSERWKEVEELLAEMTSNNCAPDEVTFNTIVTSLCQQGLVDRAI 411
Query: 121 SVYNML 126
V + +
Sbjct: 412 EVVDHM 417
Score = 41.2 bits (95), Expect = 0.16, Method: Composition-based stats.
Identities = 32/127 (25%), Positives = 54/127 (42%), Gaps = 6/127 (4%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C G + +++ F A VV N+M+ YCR G +E R ++ +
Sbjct: 193 LIKRLCSDGRVSDAERV---FAALGPSATVVTYNTMVNGYCRAGRIEDAR---RLINGMP 246
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
PD TF+ LI+ C A DM +G P S L+ K + +A+
Sbjct: 247 FPPDTFTFNPLIRALCVRGRIPDALAVFDDMLHRGCSPSVVTYSILLDATCKESGYRQAM 306
Query: 121 SVYNMLR 127
++ + +R
Sbjct: 307 ALLDEMR 313
Score = 40.8 bits (94), Expect = 0.19, Method: Composition-based stats.
Identities = 24/126 (19%), Positives = 54/126 (42%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++++ C+ G + ++ D+V N ++ C ++ M ++ L
Sbjct: 502 VVASLCQKGLVDRAIRVVEQMSENGCSPDIVTYNCIIDGLCNESCIDDAMELLSDLQSCG 561
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
PD TF+ L+K C + A + M +M R P+E +++I L + ++A+
Sbjct: 562 CKPDIVTFNTLLKGLCGVDRWEDAEQLMANMMRSNCPPDELTFNTVITSLCQKGLLTQAI 621
Query: 121 SVYNML 126
++
Sbjct: 622 ETLKIM 627
Score = 40.4 bits (93), Expect = 0.24, Method: Composition-based stats.
Identities = 21/99 (21%), Positives = 46/99 (46%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ C + +E ++L + D V N+++ + C+ G ++ + V+ ++ E
Sbjct: 467 VLKGLCSTEQWERAEELMAEMLCSDCPPDEVTFNTVVASLCQKGLVDRAIRVVEQMSENG 526
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPE 99
SPD T++ +I C E A + D+ G +P+
Sbjct: 527 CSPDIVTYNCIIDGLCNESCIDDAMELLSDLQSCGCKPD 565
Score = 36.6 bits (83), Expect = 3.1, Method: Composition-based stats.
Identities = 31/137 (22%), Positives = 57/137 (41%), Gaps = 13/137 (9%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+IS ++G EE L + D S+ CR + + ++R++ +
Sbjct: 675 VISNLTKAGKMEEALDLLRVMVSNGLCPDTTTYRSLAYGVCREDGTDRAVRMLRRVQDTG 734
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+SPD ++ ++ FC+++ LA M G P+E L+ EAL
Sbjct: 735 LSPDTTFYNDVLLGFCRDRRTDLAIDCFAHMVSSGCMPDESTYVILL----------EAL 784
Query: 121 SVYNMLRYSKR---SMC 134
+ +L +KR S+C
Sbjct: 785 AYGGLLDEAKRLLASLC 801
>gi|357111163|ref|XP_003557384.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g41720-like [Brachypodium distachyon]
Length = 821
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/154 (21%), Positives = 67/154 (43%), Gaps = 5/154 (3%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+IS C+ G + E+ + D + +S++C+Y + G + + E
Sbjct: 548 LISGLCKVGKYAESLKFFEDMVDLRIPLTKEVYSSLICSYVKQGKLTEAESTFSSMKESG 607
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
PD T+ +I+ + + + A+ +M QP+ +CSSL+ L + H L
Sbjct: 608 CLPDVLTYTAMIEAYNDDGSWRNAWDLFKEMEGNTVQPDAIICSSLMEALNRGSQHERVL 667
Query: 121 SVYNMLRYSKRSMCKALHEKI-LHILISGKLLKD 153
+ ++ + C L++K I+ S +L+D
Sbjct: 668 QLMELM----KEKCIPLNQKAYFEIIASCSMLRD 697
Score = 37.7 bits (86), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 21/88 (23%), Positives = 43/88 (48%)
Query: 27 KYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYMLAYR 86
+ DVV ++L AY R+G E +++ + + P+ +++ LI + M+ A
Sbjct: 399 RPDVVSYTTLLNAYGRSGQPEKAREAFKEMRKNSCRPNIVSYNALIDAYGSAGMFKEAIS 458
Query: 87 TMVDMHRKGHQPEEELCSSLIFHLGKMR 114
+ +M + G P+ S+L+ G+ R
Sbjct: 459 LLHEMEKDGIPPDVVSISTLLTACGRCR 486
Score = 35.4 bits (80), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 48/103 (46%)
Query: 27 KYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYMLAYR 86
K ++V NS + +Y GD + + + ++PD T++ILI CK Y + +
Sbjct: 504 KLNIVCYNSGIGSYLNFGDYGKALELYAVMMASNVNPDAVTYNILISGLCKVGKYAESLK 563
Query: 87 TMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVYNMLRYS 129
DM +E+ SSLI K +EA S ++ ++ S
Sbjct: 564 FFEDMVDLRIPLTKEVYSSLICSYVKQGKLTEAESTFSSMKES 606
>gi|222616383|gb|EEE52515.1| hypothetical protein OsJ_34721 [Oryza sativa Japonica Group]
Length = 820
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/126 (22%), Positives = 56/126 (44%)
Query: 2 ISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAI 61
+ +C++G E +L + + D + ++ YC G+M++ V ++ + I
Sbjct: 406 MDTYCKNGNMNEAVKLLNEMKYGGLTPDKIHYTCLISGYCLKGEMQNAQQVFEEMLKANI 465
Query: 62 SPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEALS 121
PD T++IL FCK + M + + M +G +P I + SEA
Sbjct: 466 EPDIVTYNILASGFCKSGLVMEVFDLLDRMADQGLEPNSLTYGIAIVGFCRGGNLSEAEV 525
Query: 122 VYNMLR 127
++N++
Sbjct: 526 LFNVVE 531
Score = 37.0 bits (84), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 17/77 (22%), Positives = 39/77 (50%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+IS +C G + +Q+ + + D+V N + +C++G + V ++ ++ +
Sbjct: 440 LISGYCLKGEMQNAQQVFEEMLKANIEPDIVTYNILASGFCKSGLVMEVFDLLDRMADQG 499
Query: 61 ISPDYNTFHILIKYFCK 77
+ P+ T+ I I FC+
Sbjct: 500 LEPNSLTYGIAIVGFCR 516
Score = 35.8 bits (81), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 17/80 (21%), Positives = 38/80 (47%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+IS +C++G ++ D + DV++ ++ YC+ G ++ + ++ L
Sbjct: 615 LISIYCQNGDMDKAHLWFHDMVQRGLSVDVIVYTILMNGYCKAGRLQEACQLFVQMTNLG 674
Query: 61 ISPDYNTFHILIKYFCKEKM 80
I PD + +L+ KE +
Sbjct: 675 IKPDVIAYTVLLDGHLKETL 694
>gi|297738205|emb|CBI27406.3| unnamed protein product [Vitis vinifera]
Length = 821
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/155 (23%), Positives = 73/155 (47%), Gaps = 2/155 (1%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I FC+ G E +L + V +++ YC GDM S+ ++ +++ A
Sbjct: 548 LIYGFCKKGKLAEAVKLLDTIKVHGLVPTSVTYTTLMNGYCEEGDMHSMFDMLHEMEAKA 607
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
I P T+ +++K CKE + + + M+ +G P++ +++I K +A
Sbjct: 608 IKPTQITYTVVVKGLCKEGRLHESVQLLKYMYARGLFPDQITYNTVIQSFCKAHDLQKAF 667
Query: 121 SVYN-MLRYSKRSMCKALHEKILHILISGKLLKDA 154
++N ML++S + + I + + G LKDA
Sbjct: 668 QLHNQMLQHSLQPSPVTYNVLINGLCVYGN-LKDA 701
Score = 37.4 bits (85), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 28/108 (25%), Positives = 49/108 (45%), Gaps = 2/108 (1%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYD-KYDVVLLNSMLCAYCRTGDMESVMHVMRKLDEL 59
+IS G E Q+ D K D +++L N M+ Y + G++ + +++ E
Sbjct: 478 IISGLFEKGAISEA-QMYFDSVTKSDVAEEIILYNIMIDGYAKLGNIGEAVRSYKQIIEK 536
Query: 60 AISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLI 107
ISP TF+ LI FCK+ A + + + G P ++L+
Sbjct: 537 GISPTIVTFNSLIYGFCKKGKLAEAVKLLDTIKVHGLVPTSVTYTTLM 584
>gi|302820365|ref|XP_002991850.1| hypothetical protein SELMODRAFT_134282 [Selaginella moellendorffii]
gi|300140388|gb|EFJ07112.1| hypothetical protein SELMODRAFT_134282 [Selaginella moellendorffii]
Length = 425
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/101 (25%), Positives = 53/101 (52%)
Query: 27 KYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYMLAYR 86
+Y V++ N+++ AY R+ + VM ++LD+ P+ T+ +I+ K +LA
Sbjct: 11 RYHVLVSNAVIAAYGRSSRIHKVMDEFQELDKHGSKPNAYTYKCVIQSLVKAGNVVLAME 70
Query: 87 TMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVYNMLR 127
+ M + G +P+ LC+ ++ LGK EA ++ ++
Sbjct: 71 LLDKMIKTGLEPDTLLCNVVLDGLGKANMMDEACKLFASMK 111
Score = 45.8 bits (107), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 32/127 (25%), Positives = 59/127 (46%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I +C++G E + K D LNS++ A RTG E + ++ +
Sbjct: 160 VIDIYCKAGRIESAMVVLKKMLDKNLAPDDYTLNSLITAVSRTGRTELACEIFERMKKSG 219
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
++ + +F+ ++ K LAY+ M +M +G +P ++LI LG+ + SEA
Sbjct: 220 VAVNTVSFNAMLDCCGKAGKVGLAYQFMDEMEARGIKPNSITFNTLINCLGRAKYASEAY 279
Query: 121 SVYNMLR 127
V +R
Sbjct: 280 KVLQEMR 286
>gi|168059281|ref|XP_001781632.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162666946|gb|EDQ53588.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 871
Score = 47.0 bits (110), Expect = 0.002, Method: Composition-based stats.
Identities = 34/159 (21%), Positives = 69/159 (43%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
MI + + GCFEE L D + + D V N+++ Y + G + + + ++ +
Sbjct: 382 MIDGYGKLGCFEEAISLYHDMKESGVRPDRVSYNTLIDIYAKLGRFDDALIACKDMERVG 441
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ D T++ LI + K+ Y A M +G P S+LI K H +
Sbjct: 442 LKADVVTYNALIDAYGKQGKYKDAACLFDKMKGEGLVPNVLTYSALIDSYSKAGMHQDVS 501
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLKDAYIVVK 159
+V+ + + L+ ++ L++DA ++++
Sbjct: 502 NVFTEFKRAGLKPDVVLYSSLIDSCCKCGLVEDAVVLLQ 540
Score = 46.6 bits (109), Expect = 0.004, Method: Composition-based stats.
Identities = 28/120 (23%), Positives = 58/120 (48%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ R G +E+++++ + + + + D+ N+++ A C+ G ME +M +
Sbjct: 312 LIAVCSRGGLWEDSQRVFAEMQRRGIEQDIFTFNTLIDAVCKGGQMELAASIMTTMRGKN 371
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
ISP+ T+ +I + K + A DM G +P+ ++LI K+ +AL
Sbjct: 372 ISPNVVTYSTMIDGYGKLGCFEEAISLYHDMKESGVRPDRVSYNTLIDIYAKLGRFDDAL 431
Score = 46.2 bits (108), Expect = 0.005, Method: Composition-based stats.
Identities = 35/131 (26%), Positives = 53/131 (40%)
Query: 29 DVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYMLAYRTM 88
D + NS++ R G E V ++ I D TF+ LI CK LA M
Sbjct: 305 DRITFNSLIAVCSRGGLWEDSQRVFAEMQRRGIEQDIFTFNTLIDAVCKGGQMELAASIM 364
Query: 89 VDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVYNMLRYSKRSMCKALHEKILHILISG 148
M K P S++I GK+ EA+S+Y+ ++ S + + ++ I
Sbjct: 365 TTMRGKNISPNVVTYSTMIDGYGKLGCFEEAISLYHDMKESGVRPDRVSYNTLIDIYAKL 424
Query: 149 KLLKDAYIVVK 159
DA I K
Sbjct: 425 GRFDDALIACK 435
Score = 42.7 bits (99), Expect = 0.046, Method: Composition-based stats.
Identities = 28/127 (22%), Positives = 56/127 (44%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I A C+ G E + K +VV ++M+ Y + G E + + + E
Sbjct: 347 LIDAVCKGGQMELAASIMTTMRGKNISPNVVTYSTMIDGYGKLGCFEEAISLYHDMKESG 406
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ PD +++ LI + K + A DM R G + + ++LI GK + +A
Sbjct: 407 VRPDRVSYNTLIDIYAKLGRFDDALIACKDMERVGLKADVVTYNALIDAYGKQGKYKDAA 466
Query: 121 SVYNMLR 127
+++ ++
Sbjct: 467 CLFDKMK 473
Score = 37.7 bits (86), Expect = 1.7, Method: Composition-based stats.
Identities = 17/75 (22%), Positives = 44/75 (58%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I ++ ++G ++ + +F+ K DVVL +S++ + C+ G +E + +++++ +
Sbjct: 487 LIDSYSKAGMHQDVSNVFTEFKRAGLKPDVVLYSSLIDSCCKCGLVEDAVVLLQEMTQAG 546
Query: 61 ISPDYNTFHILIKYF 75
I P+ T++ LI +
Sbjct: 547 IQPNIVTYNSLIDAY 561
Score = 37.0 bits (84), Expect = 2.7, Method: Composition-based stats.
Identities = 28/128 (21%), Positives = 62/128 (48%), Gaps = 1/128 (0%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTG-DMESVMHVMRKLDEL 59
M+SA+ RSG E ++ + K +++ N+++ A + G D++ + + ++ +
Sbjct: 241 MVSAYGRSGRCREALKVFQAMKKAGCKPNLITYNTIIDACGKGGVDLKQALDIFDEMQKE 300
Query: 60 AISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEA 119
+ PD TF+ LI + ++ + R +M R+G + + ++LI + K A
Sbjct: 301 GVEPDRITFNSLIAVCSRGGLWEDSQRVFAEMQRRGIEQDIFTFNTLIDAVCKGGQMELA 360
Query: 120 LSVYNMLR 127
S+ +R
Sbjct: 361 ASIMTTMR 368
>gi|48525335|gb|AAT44969.1| At2g36240 [Arabidopsis thaliana]
gi|50198948|gb|AAT70477.1| At2g36240 [Arabidopsis thaliana]
Length = 379
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 40/72 (55%)
Query: 27 KYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYMLAYR 86
K +V + N+++ Y ++GDM+ + +++ + PD TF+ILI +C+ + LA
Sbjct: 72 KPNVGVYNTVVNGYVKSGDMDKALRFYQRMGKERAKPDVCTFNILINGYCRSSKFDLALD 131
Query: 87 TMVDMHRKGHQP 98
+M KG +P
Sbjct: 132 LFREMKEKGCEP 143
Score = 35.4 bits (80), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 22/110 (20%), Positives = 47/110 (42%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+++ + +SG ++ + + K DV N ++ YCR+ + + + R++ E
Sbjct: 81 VVNGYVKSGDMDKALRFYQRMGKERAKPDVCTFNILINGYCRSSKFDLALDLFREMKEKG 140
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHL 110
P+ +F+ LI+ F + +M G + E C L+ L
Sbjct: 141 CEPNVVSFNTLIRGFLSSGKIEEGVKMAYEMIELGCRFSEATCEILVDGL 190
>gi|116789117|gb|ABK25122.1| unknown [Picea sitchensis]
Length = 572
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/128 (26%), Positives = 63/128 (49%), Gaps = 2/128 (1%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTG-DMESVMHVMRKLDEL 59
++ A CR+ EE ++L F K + N +L +C D+ V + ++ L
Sbjct: 248 LLCALCRNMFVEEAEELI-HFNKKCYPLETKSFNVILYGWCNIFVDVYQVKRLWEEMSNL 306
Query: 60 AISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEA 119
I+PD ++ +I F K + R +M +KG P ++ +++I+ L K R EA
Sbjct: 307 CITPDAFSYTTVICCFSKAGKFYDVVRLYDEMKKKGFTPNLKVYNAVIYVLSKERCVKEA 366
Query: 120 LSVYNMLR 127
L+++N +R
Sbjct: 367 LNLFNKIR 374
>gi|414868449|tpg|DAA47006.1| TPA: hypothetical protein ZEAMMB73_127498 [Zea mays]
Length = 870
Score = 47.0 bits (110), Expect = 0.002, Method: Composition-based stats.
Identities = 32/124 (25%), Positives = 62/124 (50%), Gaps = 2/124 (1%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ F + ++E +L ++ + D V N++L Y +TG + + V ++++L
Sbjct: 391 LMDGFSKLEKYDEALKLREKMKSLRIQLDRVCYNTLLAIYVKTGKYDEIATVCEEMEKLG 450
Query: 61 ISPDYNTFHILIKYFCKE-KMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEA 119
I D T++ LI + K+ ++ M+A+ DM +G P S+LI K H +A
Sbjct: 451 IEKDTVTYNSLINGYGKQGRLDMVAFLVQ-DMRAQGVAPSVLTYSTLIDIYSKAGMHGDA 509
Query: 120 LSVY 123
+VY
Sbjct: 510 FNVY 513
Score = 44.3 bits (103), Expect = 0.019, Method: Composition-based stats.
Identities = 25/112 (22%), Positives = 54/112 (48%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+++ + ++G ++E + + E + D V NS++ Y + G ++ V +++ +
Sbjct: 426 LLAIYVKTGKYDEIATVCEEMEKLGIEKDTVTYNSLINGYGKQGRLDMVAFLVQDMRAQG 485
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGK 112
++P T+ LI + K M+ A+ +D G + + L SS I L K
Sbjct: 486 VAPSVLTYSTLIDIYSKAGMHGDAFNVYLDFKESGLKADVVLFSSFIDTLAK 537
Score = 42.0 bits (97), Expect = 0.075, Method: Composition-based stats.
Identities = 28/118 (23%), Positives = 53/118 (44%), Gaps = 1/118 (0%)
Query: 33 LNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYMLAYRTMVDMH 92
NS+L A R G +E V ++ L D T++ + CK LA + ++DM
Sbjct: 318 FNSLLAACSRAGHLEDARTVFDEMIHLGSGRDIYTYNTFVDAICKCGNMGLALQVVLDME 377
Query: 93 RKGHQPEEELCSSLIFHLGKMRAHSEALSVYNMLRYSKRSMCKALHEKILHILI-SGK 149
+P S+L+ K+ + EAL + ++ + + + + +L I + +GK
Sbjct: 378 ANNAKPNVVTYSTLMDGFSKLEKYDEALKLREKMKSLRIQLDRVCYNTLLAIYVKTGK 435
Score = 37.7 bits (86), Expect = 1.4, Method: Composition-based stats.
Identities = 19/81 (23%), Positives = 43/81 (53%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I + ++G + + DF+ K DVVL +S + + G +E + ++ ++ ++
Sbjct: 496 LIDIYSKAGMHGDAFNVYLDFKESGLKADVVLFSSFIDTLAKNGLVECALSLLDEMMKMG 555
Query: 61 ISPDYNTFHILIKYFCKEKMY 81
I P+ T++ +I F K K++
Sbjct: 556 IKPNVVTYNTIIDAFGKSKIF 576
>gi|224130828|ref|XP_002328386.1| predicted protein [Populus trichocarpa]
gi|222838101|gb|EEE76466.1| predicted protein [Populus trichocarpa]
Length = 617
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/123 (21%), Positives = 59/123 (47%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ C+ G E + ++ K + + N+++ YC M+ + V+ +
Sbjct: 312 LVDGLCKEGMVSEARCVSETMTEKGAEPNAYTYNALMDGYCLHNQMDEAIKVLGIMIGKG 371
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+P+ ++++ILI +CK K A R + +M K P+ S+L+ L ++ EAL
Sbjct: 372 CAPNLSSYNILINGYCKSKRMNEAKRLLSEMSEKNLTPDTVTYSTLMQGLCQVGRPREAL 431
Query: 121 SVY 123
+++
Sbjct: 432 NLF 434
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/99 (25%), Positives = 43/99 (43%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I + C+ E + + + DVV N++L +C G + + +++
Sbjct: 242 IIDSLCKDRLVNEAVEFLSEMVDRGIPPDVVTYNTILHGFCSLGQLNEATRLFKEMVGRN 301
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPE 99
+ PD TF+IL+ CKE M A M KG +P
Sbjct: 302 VMPDTVTFNILVDGLCKEGMVSEARCVSETMTEKGAEPN 340
Score = 45.4 bits (106), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 30/124 (24%), Positives = 57/124 (45%), Gaps = 3/124 (2%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ +C+S E K+L + K D V ++++ C+ G +++ +++
Sbjct: 382 LINGYCKSKRMNEAKRLLSEMSEKNLTPDTVTYSTLMQGLCQVGRPREALNLFKEMCSSG 441
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLI---FHLGKMRAHS 117
+ PD + IL+ FCK A + + +MH + +P L + LI F GK+
Sbjct: 442 LLPDLMAYSILLDGFCKHGHLDEALKLLKEMHERRIKPNIILYTILIRGMFIAGKLEVAK 501
Query: 118 EALS 121
E S
Sbjct: 502 ELFS 505
Score = 44.3 bits (103), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 21/99 (21%), Positives = 48/99 (48%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ C G +E L + + +V+ N+++ C+ G+ + V RK+++
Sbjct: 172 LINGLCNEGKIKEAVGLFNEMVWSGHEPNVISYNTVINGLCKNGNTIMAVRVFRKMEQNR 231
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPE 99
P+ T++ +I CK+++ A + +M +G P+
Sbjct: 232 GKPNVVTYNTIIDSLCKDRLVNEAVEFLSEMVDRGIPPD 270
Score = 43.9 bits (102), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 32/127 (25%), Positives = 57/127 (44%)
Query: 28 YDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYMLAYRT 87
++V LN ++ CR ++ + VM K+ +L I PD TF+ LI C E A
Sbjct: 129 HNVYSLNVLINCLCRLSHVDFAVSVMGKMFKLGIQPDAITFNTLINGLCNEGKIKEAVGL 188
Query: 88 MVDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVYNMLRYSKRSMCKALHEKILHILIS 147
+M GH+P +++I L K A+ V+ + ++ + I+ L
Sbjct: 189 FNEMVWSGHEPNVISYNTVINGLCKNGNTIMAVRVFRKMEQNRGKPNVVTYNTIIDSLCK 248
Query: 148 GKLLKDA 154
+L+ +A
Sbjct: 249 DRLVNEA 255
Score = 41.2 bits (95), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 27/122 (22%), Positives = 53/122 (43%), Gaps = 2/122 (1%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ FC+ G +E +L + + K +++L ++ G +E + KL
Sbjct: 452 LLDGFCKHGHLDEALKLLKEMHERRIKPNIILYTILIRGMFIAGKLEVAKELFSKLSADG 511
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
I PD T++++IK KE + AY M G P+ CS + G ++ +
Sbjct: 512 IRPDIWTYNVMIKGLLKEGLSDEAYEFFRKMEDDGFLPDS--CSYNVIIQGFLQNQDSST 569
Query: 121 SV 122
++
Sbjct: 570 AI 571
>gi|222637127|gb|EEE67259.1| hypothetical protein OsJ_24425 [Oryza sativa Japonica Group]
Length = 799
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/95 (25%), Positives = 45/95 (47%)
Query: 4 AFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISP 63
C+ G +L + +K + ++ NS++ C+ G++E M M +DE + P
Sbjct: 469 GLCKQGDVCAANELLHEMCSKGLELNIFTYNSLINGLCKAGNLEQAMRTMIDMDEAGLKP 528
Query: 64 DYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQP 98
D T+ +I C+ K A+ + +M KG +P
Sbjct: 529 DVYTYTTIIGALCQSKELDRAHSLLQEMLDKGIKP 563
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/127 (26%), Positives = 60/127 (47%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+++ FC SG E K+L K + NS++ YC +M+S + + +
Sbjct: 571 LMNGFCMSGRVEGGKRLLEWMLEKNIHPNTTTYNSLMKQYCIEKNMKSTTEIYKGMLSQE 630
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ P+ NT++ILIK CK + A +M KG + ++LI L K + +EA
Sbjct: 631 VVPNENTYNILIKGHCKARNMKEALYFHSEMIEKGFRLTASSYNALIRLLNKKKKFTEAR 690
Query: 121 SVYNMLR 127
++ +R
Sbjct: 691 RLFEKMR 697
Score = 42.0 bits (97), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 24/95 (25%), Positives = 44/95 (46%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ CR+G +E +++ + E K D V ++ YC+ G M V K+ +
Sbjct: 396 LINGLCRAGELKEAERVLQEMEDKGLDVDAVTYTVLIDGYCKVGKMTEAFLVHNKMVQKR 455
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKG 95
++P+ T+ L CK+ A + +M KG
Sbjct: 456 VTPNVVTYTALSDGLCKQGDVCAANELLHEMCSKG 490
Score = 38.5 bits (88), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 26/124 (20%), Positives = 53/124 (42%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ C G + ++ D D + +++ +CR GD+ + + ++ +
Sbjct: 326 VIALLCDEGQVSDAVRVVEDMVMHGVVLDAAVFTTVMSGFCRKGDLAAARNWFDEMQKRG 385
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
++ D T+ LI C+ A R + +M KG + + LI K+ +EA
Sbjct: 386 LAADGVTYTALINGLCRAGELKEAERVLQEMEDKGLDVDAVTYTVLIDGYCKVGKMTEAF 445
Query: 121 SVYN 124
V+N
Sbjct: 446 LVHN 449
Score = 38.5 bits (88), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 22/107 (20%), Positives = 50/107 (46%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ C++G E+ + D + K DV +++ A C++ +++ +++++ +
Sbjct: 501 LINGLCKAGNLEQAMRTMIDMDEAGLKPDVYTYTTIIGALCQSKELDRAHSLLQEMLDKG 560
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLI 107
I P T+++L+ FC R + M K P +SL+
Sbjct: 561 IKPTIVTYNVLMNGFCMSGRVEGGKRLLEWMLEKNIHPNTTTYNSLM 607
Score = 38.1 bits (87), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 31/120 (25%), Positives = 51/120 (42%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I A C+S + L + K K +V N ++ +C +G +E ++ + E
Sbjct: 536 IIGALCQSKELDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKRLLEWMLEKN 595
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
I P+ T++ L+K +C EK M + P E + LI K R EAL
Sbjct: 596 IHPNTTTYNSLMKQYCIEKNMKSTTEIYKGMLSQEVVPNENTYNILIKGHCKARNMKEAL 655
>gi|413948663|gb|AFW81312.1| hypothetical protein ZEAMMB73_082399 [Zea mays]
Length = 798
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 40/77 (51%), Gaps = 5/77 (6%)
Query: 34 NSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHR 93
N M+ YC G +E + +++K+ + PD T+ +LI+Y+CK A M R
Sbjct: 277 NIMIRGYCSLGQLEEAVRLLKKMSGSGLQPDVVTYILLIQYYCKIGRCAEARSVFDSMVR 336
Query: 94 KGHQPEEELCSSLIFHL 110
KG +P +S I+H+
Sbjct: 337 KGQKP-----NSTIYHI 348
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 39/160 (24%), Positives = 74/160 (46%), Gaps = 6/160 (3%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I F + G ++ L + + DVV +S++ C+ M +++ + +
Sbjct: 209 IIDGFFKEGEVDKAYFLFDEMIGQGFPPDVVTYSSLIDGLCKAQAMNKAEAILQHMFDKG 268
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ P+ T++I+I+ +C A R + M G QP+ LI + K+ +EA
Sbjct: 269 VMPNTRTYNIMIRGYCSLGQLEEAVRLLKKMSGSGLQPDVVTYILLIQYYCKIGRCAEAR 328
Query: 121 SVYN-MLRYSKRSMCKALHEKILHILISGKLLKDAYIVVK 159
SV++ M+R ++ + I HIL+ G K A I V+
Sbjct: 329 SVFDSMVRKGQKP-----NSTIYHILLHGYATKGALIDVR 363
>gi|356557957|ref|XP_003547276.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At5g43820-like [Glycine max]
Length = 505
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/120 (25%), Positives = 51/120 (42%), Gaps = 1/120 (0%)
Query: 5 FCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPD 64
CR + + K D +DV N++ + R G + V VMR+++ + PD
Sbjct: 190 LCRRSHVGAANSVLNSMKGKVD-FDVGTYNAVAGGWSRFGRVSEVERVMREMEADGLRPD 248
Query: 65 YNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVYN 124
TF LI+ +E A + M QP+ E +++IF+ + E + YN
Sbjct: 249 CRTFGFLIEGLGREGRMDEAVEILCGMKEMNCQPDTETYNAVIFNFVSVGDFEECIKYYN 308
>gi|302815687|ref|XP_002989524.1| hypothetical protein SELMODRAFT_41495 [Selaginella moellendorffii]
gi|300142702|gb|EFJ09400.1| hypothetical protein SELMODRAFT_41495 [Selaginella moellendorffii]
Length = 523
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/133 (24%), Positives = 61/133 (45%)
Query: 27 KYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYMLAYR 86
K D V M+ +CR G+++ + + ++ SPD TF LI FCK + A
Sbjct: 209 KPDTVTYTRMIDGFCRRGELDKALVIYSRMKNSESSPDVVTFGCLINGFCKALKFDEAII 268
Query: 87 TMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVYNMLRYSKRSMCKALHEKILHILI 146
+ G +P+E SS+I L + AL V+ + R L+ ++++ L
Sbjct: 269 ILKASLDAGLEPDEITYSSIIDPLCNLELWDIALVVFELARQRNCPGSIYLYSRLMNCLC 328
Query: 147 SGKLLKDAYIVVK 159
+++A ++++
Sbjct: 329 KAGKIEEAVLLLE 341
Score = 41.2 bits (95), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 37/142 (26%), Positives = 58/142 (40%), Gaps = 16/142 (11%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I AFC+ EE Q+A E + DVV S L A C+ G ++ ++ +
Sbjct: 369 VIDAFCQENRIEEALQMAKAMEEQGIGADVVTYTSFLRALCKVGMVDEACKLLEMMATSG 428
Query: 61 IS-PDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEE--------ELCSS------ 105
S PD + L+ FC A + M G +P++ LC+S
Sbjct: 429 SSFPDVIACNALVGAFCSAARVEEACNLLRAMLEHGIEPDDLTYTQVIGALCASKRMEAA 488
Query: 106 -LIFHLGKMRAHSEALSVYNML 126
L+F K+ H+ L+ Y L
Sbjct: 489 MLLFEYMKVANHTPKLTTYKEL 510
Score = 35.4 bits (80), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 25/119 (21%), Positives = 53/119 (44%), Gaps = 12/119 (10%)
Query: 1 MISAFCRSGCFEETKQLAGDFE-----------AKYDKYDVVLLNSMLCAYCRTGDMESV 49
+++ C++G EE L D + K +V+ N+++ A+C+ +E
Sbjct: 323 LMNCLCKAGKIEEAVLLLEDMSHGRKHSGQALGGEVCKPTLVIYNNVIDAFCQENRIEEA 382
Query: 50 MHVMRKLDELAISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQ-PEEELCSSLI 107
+ + + ++E I D T+ ++ CK M A + + M G P+ C++L+
Sbjct: 383 LQMAKAMEEQGIGADVVTYTSFLRALCKVGMVDEACKLLEMMATSGSSFPDVIACNALV 441
>gi|115472343|ref|NP_001059770.1| Os07g0513200 [Oryza sativa Japonica Group]
gi|27818007|dbj|BAC55770.1| putative CRP1 protein [Oryza sativa Japonica Group]
gi|50509504|dbj|BAD31185.1| putative CRP1 protein [Oryza sativa Japonica Group]
gi|113611306|dbj|BAF21684.1| Os07g0513200 [Oryza sativa Japonica Group]
gi|215715304|dbj|BAG95055.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 754
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/95 (25%), Positives = 45/95 (47%)
Query: 4 AFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISP 63
C+ G +L + +K + ++ NS++ C+ G++E M M +DE + P
Sbjct: 469 GLCKQGDVCAANELLHEMCSKGLELNIFTYNSLINGLCKAGNLEQAMRTMIDMDEAGLKP 528
Query: 64 DYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQP 98
D T+ +I C+ K A+ + +M KG +P
Sbjct: 529 DVYTYTTIIGALCQSKELDRAHSLLQEMLDKGIKP 563
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 34/127 (26%), Positives = 60/127 (47%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+++ FC SG E K+L K + NS++ YC +M+S + + +
Sbjct: 571 LMNGFCMSGRVEGGKRLLEWMLEKNIHPNTTTYNSLMKQYCIEKNMKSTTEIYKGMLSQE 630
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ P+ NT++ILIK CK + A +M KG + ++LI L K + +EA
Sbjct: 631 VVPNENTYNILIKGHCKARNMKEALYFHSEMIEKGFRLTASSYNALIRLLNKKKKFTEAR 690
Query: 121 SVYNMLR 127
++ +R
Sbjct: 691 RLFEKMR 697
Score = 42.0 bits (97), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 24/95 (25%), Positives = 44/95 (46%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ CR+G +E +++ + E K D V ++ YC+ G M V K+ +
Sbjct: 396 LINGLCRAGELKEAERVLQEMEDKGLDVDAVTYTVLIDGYCKVGKMTEAFLVHNKMVQKR 455
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKG 95
++P+ T+ L CK+ A + +M KG
Sbjct: 456 VTPNVVTYTALSDGLCKQGDVCAANELLHEMCSKG 490
Score = 38.1 bits (87), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 26/124 (20%), Positives = 53/124 (42%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ C G + ++ D D + +++ +CR GD+ + + ++ +
Sbjct: 326 VIALLCDEGQVSDAVRVVEDMVMHGVVLDAAVFTTVMSGFCRKGDLAAARNWFDEMQKRG 385
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
++ D T+ LI C+ A R + +M KG + + LI K+ +EA
Sbjct: 386 LAADGVTYTALINGLCRAGELKEAERVLQEMEDKGLDVDAVTYTVLIDGYCKVGKMTEAF 445
Query: 121 SVYN 124
V+N
Sbjct: 446 LVHN 449
Score = 38.1 bits (87), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 22/107 (20%), Positives = 50/107 (46%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ C++G E+ + D + K DV +++ A C++ +++ +++++ +
Sbjct: 501 LINGLCKAGNLEQAMRTMIDMDEAGLKPDVYTYTTIIGALCQSKELDRAHSLLQEMLDKG 560
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLI 107
I P T+++L+ FC R + M K P +SL+
Sbjct: 561 IKPTIVTYNVLMNGFCMSGRVEGGKRLLEWMLEKNIHPNTTTYNSLM 607
Score = 37.7 bits (86), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 31/120 (25%), Positives = 51/120 (42%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I A C+S + L + K K +V N ++ +C +G +E ++ + E
Sbjct: 536 IIGALCQSKELDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKRLLEWMLEKN 595
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
I P+ T++ L+K +C EK M + P E + LI K R EAL
Sbjct: 596 IHPNTTTYNSLMKQYCIEKNMKSTTEIYKGMLSQEVVPNENTYNILIKGHCKARNMKEAL 655
>gi|15222997|ref|NP_172253.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75180186|sp|Q9LQQ1.1|PPR20_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g07740, mitochondrial; Flags: Precursor
gi|8439893|gb|AAF75079.1|AC007583_15 It contains PPR repeats PF|01535 [Arabidopsis thaliana]
gi|14596021|gb|AAK68738.1| Unknown protein [Arabidopsis thaliana]
gi|31376389|gb|AAP49521.1| At1g07730 [Arabidopsis thaliana]
gi|51970836|dbj|BAD44110.1| hypothetical protein [Arabidopsis thaliana]
gi|332190050|gb|AEE28171.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 459
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/159 (22%), Positives = 69/159 (43%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ C G + E K+L D E + K +V ++ + G ++ ++ ++ +
Sbjct: 262 LMKGLCCKGEYNEAKKLMFDMEYRGCKPGLVNYGILMSDLGKRGRIDEAKLLLGEMKKRR 321
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
I PD ++IL+ + C E AYR + +M KG +P +I ++ L
Sbjct: 322 IKPDVVIYNILVNHLCTECRVPEAYRVLTEMQMKGCKPNAATYRMMIDGFCRIEDFDSGL 381
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLKDAYIVVK 159
+V N + S+ A ++ LI G L A V++
Sbjct: 382 NVLNAMLASRHCPTPATFVCMVAGLIKGGNLDHACFVLE 420
Score = 40.8 bits (94), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 42/90 (46%)
Query: 30 VVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYMLAYRTMV 89
VV NS++ CR DM ++ + + I P+ TF +L+K C + Y A + M
Sbjct: 221 VVTYNSLIGFLCRNDDMGKAKSLLEDMIKKRIRPNAVTFGLLMKGLCCKGEYNEAKKLMF 280
Query: 90 DMHRKGHQPEEELCSSLIFHLGKMRAHSEA 119
DM +G +P L+ LGK EA
Sbjct: 281 DMEYRGCKPGLVNYGILMSDLGKRGRIDEA 310
>gi|473874|gb|AAA17740.1| a membrane-associated salt-inducible protein [Nicotiana tabacum]
Length = 435
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/158 (20%), Positives = 70/158 (44%), Gaps = 1/158 (0%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ A C+SG E + + AK + + N ++ + R D+ +M+++ +
Sbjct: 177 LLKACCKSGRIESALAVTKEMNAKNIPRNTFVYNILIDGWARRSDVWEAADLMQQMRQEG 236
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ PD +T+ + CK A T+ +M R G P + L + +G +AL
Sbjct: 237 VQPDIHTYTSFVNACCKAGDMQKAMNTIQEMKRVGLNPMLKPI-PLSYTVGHASLPEKAL 295
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLKDAYIVV 158
+ ++ S KA++ ++ L+S + + YI+
Sbjct: 296 KCFEEMKKSGLKPDKAVYHCLMTSLLSRATVAEDYIIT 333
Score = 42.7 bits (99), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 27/98 (27%), Positives = 47/98 (47%)
Query: 27 KYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYMLAYR 86
K DVVL N+++ A+C G+M+ + ++ ++ + P TF +I F K A
Sbjct: 28 KPDVVLYNNIIRAFCGMGNMDRALRIVEQMKKERHRPTSRTFMPIIHAFAKAGAIRKALD 87
Query: 87 TMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVYN 124
M R G P + ++LI L + R +A+ V +
Sbjct: 88 VFDMMRRSGCIPTVQTYNALILGLVEKRQMDKAVEVVD 125
>gi|414876286|tpg|DAA53417.1| TPA: hypothetical protein ZEAMMB73_373649 [Zea mays]
Length = 561
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/119 (22%), Positives = 55/119 (46%), Gaps = 4/119 (3%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ CR G +L + +V +++ +C+ G+M+ + K+ E +
Sbjct: 162 LIAGLCRKGDLASAMELHREMTRNAVSGNVYTFTALISGFCKDGNMDEATRLFHKMMESS 221
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLI----FHLGKMRA 115
+ P+ TF+++I+ +C+ A++ M +G P+ SLI LG M+A
Sbjct: 222 LVPNEVTFNVMIEGYCRVGNIRKAFQLYDQMLDRGLTPDNYTYRSLISVVCLTLGAMKA 280
Score = 45.8 bits (107), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/100 (27%), Positives = 44/100 (44%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ +C+ F + + L + AK + ++ CR GD+ S M + R++ A
Sbjct: 127 LINGYCKHNNFHQARGLLNEMVAKGLTPSPASYSPLIAGLCRKGDLASAMELHREMTRNA 186
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEE 100
+S + TF LI FCK+ A R M P E
Sbjct: 187 VSGNVYTFTALISGFCKDGNMDEATRLFHKMMESSLVPNE 226
Score = 40.4 bits (93), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 23/94 (24%), Positives = 40/94 (42%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+IS FC+ G +E +L + V N M+ YCR G++ + ++ +
Sbjct: 197 LISGFCKDGNMDEATRLFHKMMESSLVPNEVTFNVMIEGYCRVGNIRKAFQLYDQMLDRG 256
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRK 94
++PD T+ LI C M A + D+
Sbjct: 257 LTPDNYTYRSLISVVCLTLGAMKAKEFVADLENN 290
>gi|224069250|ref|XP_002302937.1| predicted protein [Populus trichocarpa]
gi|222844663|gb|EEE82210.1| predicted protein [Populus trichocarpa]
Length = 564
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/124 (19%), Positives = 57/124 (45%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I CR E ++L + +++ N+++ +C G+++ ++ +L
Sbjct: 308 LIGGMCREERVWEAEKLVDQMKKAAVSPNLITYNTLIGGFCDVGNLDKASSLLDQLKSNG 367
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+SP T++ILI+ + K + +M +G P + C+ LI +++ +A
Sbjct: 368 LSPSLVTYNILIEGYSKAGNWKGVADLAREMEGRGISPSKVTCTVLIDAYVRLQEMEKAF 427
Query: 121 SVYN 124
+Y+
Sbjct: 428 QIYS 431
Score = 39.3 bits (90), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 31/119 (26%), Positives = 51/119 (42%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I A+ R E+ Q+ E DV + ++ C G+M+ + R + E+
Sbjct: 413 LIDAYVRLQEMEKAFQIYSSMEKFGLVPDVYVYGVLIHGLCMKGNMKESSKLFRSMGEMH 472
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEA 119
+ P ++ +I +CKE A R + +M KG P SS+I L K EA
Sbjct: 473 VEPSDVIYNTMIHGYCKEDNSYRALRLLREMEAKGLVPNVASYSSIIGVLCKDGKWEEA 531
Score = 38.9 bits (89), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 27/121 (22%), Positives = 53/121 (43%), Gaps = 3/121 (2%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I FC G ++ L ++ +V N ++ Y + G+ + V + R+++
Sbjct: 343 LIGGFCDVGNLDKASSLLDQLKSNGLSPSLVTYNILIEGYSKAGNWKGVADLAREMEGRG 402
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHL---GKMRAHS 117
ISP T +LI + + + A++ M + G P+ + LI L G M+ S
Sbjct: 403 ISPSKVTCTVLIDAYVRLQEMEKAFQIYSSMEKFGLVPDVYVYGVLIHGLCMKGNMKESS 462
Query: 118 E 118
+
Sbjct: 463 K 463
Score = 38.1 bits (87), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 23/99 (23%), Positives = 43/99 (43%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
MI C +G +++ QL G + +VV+ +++ C+ GD+E K+ E+
Sbjct: 168 MIKGCCENGNLDKSFQLLGLLQDMGLSPNVVIYTTLIDGCCKNGDIERARLFFDKMGEMG 227
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPE 99
+ + TF +LI K+ + + M G P
Sbjct: 228 LVANQYTFTVLINGLFKKGLKKDGFDLFEKMKINGLFPN 266
Score = 37.0 bits (84), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 18/78 (23%), Positives = 37/78 (47%), Gaps = 1/78 (1%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ + RS CFE+ + + + K+DV M+ C G+++ ++ L ++
Sbjct: 134 LLGSLVRSNCFEKAWLFFNELKERV-KFDVYSFGIMIKGCCENGNLDKSFQLLGLLQDMG 192
Query: 61 ISPDYNTFHILIKYFCKE 78
+SP+ + LI CK
Sbjct: 193 LSPNVVIYTTLIDGCCKN 210
>gi|147803305|emb|CAN75473.1| hypothetical protein VITISV_002797 [Vitis vinifera]
Length = 1356
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/110 (22%), Positives = 51/110 (46%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C++G +E QL G+ DV+ +S++ +CR G+++S ++ ++
Sbjct: 449 LIDGLCKNGMLDEAVQLVGNMYKDGVNPDVITYSSLINGFCRVGNIKSAKEIICRMYRSG 508
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHL 110
+ + + LI FC+ A + M+ GH + C+ L+ L
Sbjct: 509 LVLNKIIYSTLIYNFCQHGNVTEAMKVYAVMNCNGHGADHFTCNVLVSSL 558
Score = 37.7 bits (86), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 20/91 (21%), Positives = 37/91 (40%)
Query: 5 FCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPD 64
FCR E +L G E K DVV N ++ C GD + + ++ + P+
Sbjct: 1014 FCRDAKIAEALKLKGVMELCGLKLDVVAYNVLIMGMCANGDSAAAFELYEEMRHRDLCPN 1073
Query: 65 YNTFHILIKYFCKEKMYMLAYRTMVDMHRKG 95
T+ +L+ + + + D+ +G
Sbjct: 1074 ITTYAVLVDAISAANNLIQGEKLLTDLQERG 1104
Score = 37.0 bits (84), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 27/124 (21%), Positives = 50/124 (40%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ C G ++ L E +V N++L YC+ G ++ + ++ +
Sbjct: 239 LINGLCVEGNLKKAGNLLKQMEENGFVPTIVTYNTLLNWYCKKGRYKAAIELIDYMICKG 298
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
I D T+++ I C AY + M ++ P E ++LI K A
Sbjct: 299 IEADVCTYNVFIDNLCTNHRSAKAYLLLKKMRKEMISPNEVTYNTLINGFVKEGKIGVAA 358
Query: 121 SVYN 124
V+N
Sbjct: 359 QVFN 362
Score = 36.2 bits (82), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 16/78 (20%), Positives = 36/78 (46%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ C+ G E K+ D V+ N++L C++G++ + + K+ +
Sbjct: 624 LLKGLCKGGNLVEAKKFLNRLHYIPGAVDSVMYNTLLAETCKSGNLHEAVALFDKMVQNN 683
Query: 61 ISPDYNTFHILIKYFCKE 78
+ PD T+ L+ C++
Sbjct: 684 VLPDSYTYSSLLTGLCRK 701
Score = 36.2 bits (82), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 26/107 (24%), Positives = 47/107 (43%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C G FEE +L EA + + V ++L C+ E ++ ++
Sbjct: 379 LIGGHCHVGDFEEALRLLDHMEAAGLRLNEVTYGTLLNGLCKHEKFELAKRLLERMRVND 438
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLI 107
+ + + +LI CK M A + + +M++ G P+ SSLI
Sbjct: 439 MVVGHIAYTVLIDGLCKNGMLDEAVQLVGNMYKDGVNPDVITYSSLI 485
>gi|414882130|tpg|DAA59261.1| TPA: hypothetical protein ZEAMMB73_845952 [Zea mays]
Length = 1603
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 40/159 (25%), Positives = 70/159 (44%), Gaps = 10/159 (6%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+++ +C++G +E L GD V+ N ++ YCR GD+E + ++ E
Sbjct: 1266 LLNGYCKAGNLKEALLLFGDLRRAGLAPTVLTYNILIDGYCRLGDLEEARILKEEMGEQG 1325
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPE-----EELCSSLIFHLGKMRA 115
P+ T+ IL+K + +A +M KG QP+ +C+ LI LG +
Sbjct: 1326 CLPNVCTYTILMKGSLNVRSLAMAREFFDEMLSKGLQPDCFAYNTRICAELI--LGDI-- 1381
Query: 116 HSEALSVYNMLRYSKRSMCKALHEKILHILISGKLLKDA 154
+ A + +L S + ++H L LKDA
Sbjct: 1382 -ARAFELREVLMLEGISSDTVTYNILIHGLCKTGNLKDA 1419
Score = 44.7 bits (104), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 38/155 (24%), Positives = 67/155 (43%), Gaps = 5/155 (3%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
MI +SG E + + A DV+ NS+L YC+ G+++ + + L
Sbjct: 1231 MIHGLLQSGLVEAAQVKFAEMRAMGLLPDVITYNSLLNGYCKAGNLKEALLLFGDLRRAG 1290
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
++P T++ILI +C+ A +M +G P +C+ I G + S A+
Sbjct: 1291 LAPTVLTYNILIDGYCRLGDLEEARILKEEMGEQGCLP--NVCTYTILMKGSLNVRSLAM 1348
Query: 121 S---VYNMLRYSKRSMCKALHEKILHILISGKLLK 152
+ ML + C A + +I LI G + +
Sbjct: 1349 AREFFDEMLSKGLQPDCFAYNTRICAELILGDIAR 1383
Score = 40.0 bits (92), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 24/95 (25%), Positives = 43/95 (45%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I A C G E +++ + + V ++ AYCR G++ S RK+ E
Sbjct: 1441 LIHAHCERGLLREARKIFNNMISDGLLPSAVTFTVIIHAYCRRGNLYSAYGWFRKMLEEG 1500
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKG 95
+ P+ T+++LI C+ LA +M +G
Sbjct: 1501 VEPNEITYNVLIHALCRMGRTQLASHHFHEMLERG 1535
Score = 37.4 bits (85), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 24/113 (21%), Positives = 48/113 (42%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C++G ++ K+L + + D + ++ A+C G + + +
Sbjct: 1406 LIHGLCKTGNLKDAKELQMKMVSNGLQPDCITYTCLIHAHCERGLLREARKIFNNMISDG 1465
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKM 113
+ P TF ++I +C+ AY M +G +P E + LI L +M
Sbjct: 1466 LLPSAVTFTVIIHAYCRRGNLYSAYGWFRKMLEEGVEPNEITYNVLIHALCRM 1518
>gi|255583247|ref|XP_002532388.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223527912|gb|EEF30000.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 676
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/127 (24%), Positives = 58/127 (45%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I +C+ G E +++ + + N ++C +CR ++ M ++ K+ E
Sbjct: 150 LIDGYCKEGMVEAAQEILDLMHSNSCNPNERTYNELICGFCRKKNVHRAMALLSKMLESR 209
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
++P T++ LI CK AYR + M+ G P++ S I L K EA
Sbjct: 210 LTPSVVTYNSLIHGQCKIGYLDSAYRLLNLMNENGVVPDQWTYSVFIDTLCKKGRIEEAN 269
Query: 121 SVYNMLR 127
++N L+
Sbjct: 270 VLFNSLK 276
Score = 43.9 bits (102), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 25/94 (26%), Positives = 44/94 (46%)
Query: 2 ISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAI 61
I C+ G EE L + K K + V+ +++ YC+ G M+ ++ ++
Sbjct: 256 IDTLCKKGRIEEANVLFNSLKEKGIKANEVIYTALIDGYCKAGKMDDANSLLDRMLTEDC 315
Query: 62 SPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKG 95
P+ +T++ LI CKE+ A M M +KG
Sbjct: 316 LPNSSTYNALIDGLCKERKVQEALLLMESMIQKG 349
Score = 38.9 bits (89), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 20/79 (25%), Positives = 42/79 (53%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
MI+A C+ EE +++ + K V N+++ YC+ G +E+ ++ + +
Sbjct: 115 MINAMCKETKLEEGRRILDEMVEKGLVPSVPTYNALIDGYCKEGMVEAAQEILDLMHSNS 174
Query: 61 ISPDYNTFHILIKYFCKEK 79
+P+ T++ LI FC++K
Sbjct: 175 CNPNERTYNELICGFCRKK 193
Score = 38.1 bits (87), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 25/107 (23%), Positives = 44/107 (41%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I FCR L VV NS++ C+ G ++S ++ ++E
Sbjct: 185 LICGFCRKKNVHRAMALLSKMLESRLTPSVVTYNSLIHGQCKIGYLDSAYRLLNLMNENG 244
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLI 107
+ PD T+ + I CK+ A + KG + E + ++LI
Sbjct: 245 VVPDQWTYSVFIDTLCKKGRIEEANVLFNSLKEKGIKANEVIYTALI 291
Score = 37.7 bits (86), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 23/108 (21%), Positives = 48/108 (44%)
Query: 36 MLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKG 95
M+ A C+ +E ++ ++ E + P T++ LI +CKE M A + MH
Sbjct: 115 MINAMCKETKLEEGRRILDEMVEKGLVPSVPTYNALIDGYCKEGMVEAAQEILDLMHSNS 174
Query: 96 HQPEEELCSSLIFHLGKMRAHSEALSVYNMLRYSKRSMCKALHEKILH 143
P E + LI + + A+++ + + S+ + + ++H
Sbjct: 175 CNPNERTYNELICGFCRKKNVHRAMALLSKMLESRLTPSVVTYNSLIH 222
>gi|218199706|gb|EEC82133.1| hypothetical protein OsI_26175 [Oryza sativa Indica Group]
Length = 799
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/95 (25%), Positives = 45/95 (47%)
Query: 4 AFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISP 63
C+ G +L + +K + ++ NS++ C+ G++E M M +DE + P
Sbjct: 469 GLCKQGDVCAANELLHEMCSKGLELNIFTYNSLINGLCKAGNLEQAMRTMIDMDEAGLKP 528
Query: 64 DYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQP 98
D T+ +I C+ K A+ + +M KG +P
Sbjct: 529 DVYTYTTIIGALCQSKELDRAHSLLQEMLDKGIKP 563
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/127 (26%), Positives = 60/127 (47%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+++ FC SG E K+L K + NS++ YC +M+S + + +
Sbjct: 571 LMNGFCMSGRVEGGKRLLEWMLEKNIHPNTTTYNSLMKQYCIEKNMKSTTEIYKGMLSQE 630
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ P+ NT++ILIK CK + A +M KG + ++LI L K + +EA
Sbjct: 631 VVPNENTYNILIKGHCKARNMKEALYFHSEMIEKGFRLTASSYNALIRLLNKKKKFTEAR 690
Query: 121 SVYNMLR 127
++ +R
Sbjct: 691 RLFEKMR 697
Score = 42.0 bits (97), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 24/95 (25%), Positives = 44/95 (46%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ CR+G +E +++ + E K D V ++ YC+ G M V K+ +
Sbjct: 396 LINGLCRAGELKEAERVLQEMEDKGLDVDAVTYTVLIDGYCKVGKMTEAFLVHNKMVQKR 455
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKG 95
++P+ T+ L CK+ A + +M KG
Sbjct: 456 VTPNVVTYTALSDGLCKQGDVCAANELLHEMCSKG 490
Score = 38.5 bits (88), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 26/124 (20%), Positives = 53/124 (42%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ C G + ++ D D + +++ +CR GD+ + + ++ +
Sbjct: 326 VIALLCDEGQVSDAVRVVEDMVMHGVVLDAAVFTTVMSGFCRKGDLAAARNWFDEMQKRG 385
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
++ D T+ LI C+ A R + +M KG + + LI K+ +EA
Sbjct: 386 LAADGVTYTALINGLCRAGELKEAERVLQEMEDKGLDVDAVTYTVLIDGYCKVGKMTEAF 445
Query: 121 SVYN 124
V+N
Sbjct: 446 LVHN 449
Score = 38.1 bits (87), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 22/107 (20%), Positives = 50/107 (46%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ C++G E+ + D + K DV +++ A C++ +++ +++++ +
Sbjct: 501 LINGLCKAGNLEQAMRTMIDMDEAGLKPDVYTYTTIIGALCQSKELDRAHSLLQEMLDKG 560
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLI 107
I P T+++L+ FC R + M K P +SL+
Sbjct: 561 IKPTIVTYNVLMNGFCMSGRVEGGKRLLEWMLEKNIHPNTTTYNSLM 607
Score = 38.1 bits (87), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 31/120 (25%), Positives = 51/120 (42%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I A C+S + L + K K +V N ++ +C +G +E ++ + E
Sbjct: 536 IIGALCQSKELDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKRLLEWMLEKN 595
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
I P+ T++ L+K +C EK M + P E + LI K R EAL
Sbjct: 596 IHPNTTTYNSLMKQYCIEKNMKSTTEIYKGMLSQEVVPNENTYNILIKGHCKARNMKEAL 655
>gi|125590530|gb|EAZ30880.1| hypothetical protein OsJ_14954 [Oryza sativa Japonica Group]
Length = 442
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/123 (21%), Positives = 56/123 (45%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I + CR G ++ QL ++V N+++ C +++ M ++ K+
Sbjct: 153 VIYSLCRKGLLQQAIQLLEKMSKHGCTANIVTYNAIINGLCEQRNVDGAMGLLSKMKSYG 212
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
PD T++ L+K C ++ A M +M + G P+ ++LI L + +A+
Sbjct: 213 CKPDIVTYNTLLKGLCSAARWVDAEELMDNMTQNGCLPDNVTFNTLIGFLCQKGLMVDAI 272
Query: 121 SVY 123
V+
Sbjct: 273 EVF 275
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 26/98 (26%), Positives = 43/98 (43%)
Query: 27 KYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYMLAYR 86
K D+V N++L C +M + + PD TF+ LI + C++ + + A
Sbjct: 214 KPDIVTYNTLLKGLCSAARWVDAEELMDNMTQNGCLPDNVTFNTLIGFLCQKGLMVDAIE 273
Query: 87 TMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVYN 124
M KG P S++I L K +AL ++N
Sbjct: 274 VFKQMPDKGCTPNSITYSTIISGLAKATKLDQALELFN 311
Score = 37.7 bits (86), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 21/110 (19%), Positives = 48/110 (43%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ A C+ + + +L A+ + V N ++ C GD++ + ++R L
Sbjct: 48 LLEATCKGRGYRQAMELIDLMRAEGCTPNNVTYNVLMDGMCGEGDVDDALELLRNLPSHG 107
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHL 110
P ++ ++K C + + A + +M R+ P E + +I+ L
Sbjct: 108 CKPSTVNYNTVLKGLCSAERWGDADELVTEMLRENCPPNEATFNVVIYSL 157
>gi|125528410|gb|EAY76524.1| hypothetical protein OsI_04465 [Oryza sativa Indica Group]
Length = 703
Score = 47.0 bits (110), Expect = 0.003, Method: Composition-based stats.
Identities = 33/154 (21%), Positives = 65/154 (42%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
MI+ C G + ++ + K + + N+++ +C+ + + K+ +
Sbjct: 445 MINGLCNVGRLVDAVKVYEKMDKDGCKPNSHIYNALISGFCQVYRTSDAVRIYSKMADNG 504
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
SP T++ LI CK + Y A +M G P+ SLI L + +AL
Sbjct: 505 CSPTVITYNTLIDGLCKAEKYQEASSVAREMVENGFTPDITTYGSLIRGLFSDKKIDDAL 564
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLKDA 154
S++ + Y + +H ++H L S + +A
Sbjct: 565 SIWKQILYKGLKVDVMMHNILIHGLCSAGKVDEA 598
Score = 41.6 bits (96), Expect = 0.11, Method: Composition-based stats.
Identities = 30/122 (24%), Positives = 51/122 (41%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C++G + + + + DV +SM+ C G + + V K+D+
Sbjct: 410 LIHGLCQNGFANKAFTIFEEARVSGKQLDVFSYSSMINGLCNVGRLVDAVKVYEKMDKDG 469
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
P+ + ++ LI FC+ A R M G P ++LI L K + EA
Sbjct: 470 CKPNSHIYNALISGFCQVYRTSDAVRIYSKMADNGCSPTVITYNTLIDGLCKAEKYQEAS 529
Query: 121 SV 122
SV
Sbjct: 530 SV 531
Score = 37.0 bits (84), Expect = 2.6, Method: Composition-based stats.
Identities = 18/77 (23%), Positives = 38/77 (49%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
M+ C+ G F+E ++ A + DV+ ++ CR+GD++ V ++ +
Sbjct: 270 MLDGLCKFGRFKEVGEVWERMVANNLQPDVITYGILIHGLCRSGDVDGAARVYSEIIKTG 329
Query: 61 ISPDYNTFHILIKYFCK 77
+ D ++ L+K FC+
Sbjct: 330 LVIDAAMYNSLVKGFCQ 346
>gi|115441099|ref|NP_001044829.1| Os01g0852900 [Oryza sativa Japonica Group]
gi|18461197|dbj|BAB84394.1| putative fertility restorer [Oryza sativa Japonica Group]
gi|113534360|dbj|BAF06743.1| Os01g0852900 [Oryza sativa Japonica Group]
gi|125572662|gb|EAZ14177.1| hypothetical protein OsJ_04103 [Oryza sativa Japonica Group]
Length = 703
Score = 47.0 bits (110), Expect = 0.003, Method: Composition-based stats.
Identities = 33/154 (21%), Positives = 65/154 (42%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
MI+ C G + ++ + K + + N+++ +C+ + + K+ +
Sbjct: 445 MINGLCNVGRLVDAVKVYEKMDKDGCKPNSHIYNALISGFCQVYRTSDAVRIYSKMADNG 504
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
SP T++ LI CK + Y A +M G P+ SLI L + +AL
Sbjct: 505 CSPTVITYNTLIDGLCKAEKYQEASSVAREMVENGFTPDITTYGSLIRGLFSDKKIDDAL 564
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLKDA 154
S++ + Y + +H ++H L S + +A
Sbjct: 565 SIWKQILYKGLKVDVMMHNILIHGLCSAGKVDEA 598
Score = 41.6 bits (96), Expect = 0.11, Method: Composition-based stats.
Identities = 30/122 (24%), Positives = 51/122 (41%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C++G + + + + DV +SM+ C G + + V K+D+
Sbjct: 410 LIHGLCQNGFANKAFTIFEEARVSGKQLDVFSYSSMINGLCNVGRLVDAVKVYEKMDKDG 469
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
P+ + ++ LI FC+ A R M G P ++LI L K + EA
Sbjct: 470 CKPNSHIYNALISGFCQVYRTSDAVRIYSKMADNGCSPTVITYNTLIDGLCKAEKYQEAS 529
Query: 121 SV 122
SV
Sbjct: 530 SV 531
Score = 37.0 bits (84), Expect = 2.6, Method: Composition-based stats.
Identities = 18/77 (23%), Positives = 38/77 (49%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
M+ C+ G F+E ++ A + DV+ ++ CR+GD++ V ++ +
Sbjct: 270 MLDGLCKFGRFKEVGEVWERMVANNLQPDVITYGILIHGLCRSGDVDGAARVYSEIIKTG 329
Query: 61 ISPDYNTFHILIKYFCK 77
+ D ++ L+K FC+
Sbjct: 330 LVIDAAMYNSLVKGFCQ 346
>gi|168002263|ref|XP_001753833.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162694809|gb|EDQ81155.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 779
Score = 47.0 bits (110), Expect = 0.003, Method: Composition-based stats.
Identities = 29/129 (22%), Positives = 58/129 (44%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I A+ R+G + ++ + DVV +++L AY + G + V + + E
Sbjct: 256 LIEAYGRAGKYRAAAKMFKQMQEAGCTPDVVTFSTLLEAYGKHGCYDEVRLLFTDMKERG 315
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
PD NT++ LI+ F + + + D+ G +P+ + L++ GK H A
Sbjct: 316 TEPDVNTYNTLIQVFGQGGFFQESINLFWDLLDGGVEPDMSTYAGLLYSCGKGGLHKAAK 375
Query: 121 SVYNMLRYS 129
++ + S
Sbjct: 376 KIHRHMLQS 384
Score = 45.4 bits (106), Expect = 0.008, Method: Composition-based stats.
Identities = 27/112 (24%), Positives = 52/112 (46%)
Query: 12 EETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHIL 71
E +L + E + DVV N ++ AY R G + + +++ E +PD TF L
Sbjct: 232 EGVGELLREMEQAGNAPDVVAYNILIEAYGRAGKYRAAAKMFKQMQEAGCTPDVVTFSTL 291
Query: 72 IKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVY 123
++ + K Y DM +G +P+ ++LI G+ E+++++
Sbjct: 292 LEAYGKHGCYDEVRLLFTDMKERGTEPDVNTYNTLIQVFGQGGFFQESINLF 343
Score = 37.4 bits (85), Expect = 2.2, Method: Composition-based stats.
Identities = 21/90 (23%), Positives = 43/90 (47%)
Query: 29 DVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYMLAYRTM 88
D + N+++ Y + E V ++R++++ +PD ++ILI+ + + Y A +
Sbjct: 214 DSITYNALVDIYGQADRHEGVGELLREMEQAGNAPDVVAYNILIEAYGRAGKYRAAAKMF 273
Query: 89 VDMHRKGHQPEEELCSSLIFHLGKMRAHSE 118
M G P+ S+L+ GK + E
Sbjct: 274 KQMQEAGCTPDVVTFSTLLEAYGKHGCYDE 303
Score = 35.0 bits (79), Expect = 9.7, Method: Composition-based stats.
Identities = 20/99 (20%), Positives = 46/99 (46%)
Query: 29 DVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYMLAYRTM 88
D++ N++L A G +E V R ++E + PD T++ L+ + + + +
Sbjct: 179 DIITYNTLLSACSSRGLVEEAGMVFRTMNEAGVVPDSITYNALVDIYGQADRHEGVGELL 238
Query: 89 VDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVYNMLR 127
+M + G+ P+ + LI G+ + A ++ ++
Sbjct: 239 REMEQAGNAPDVVAYNILIEAYGRAGKYRAAAKMFKQMQ 277
>gi|413926076|gb|AFW66008.1| hypothetical protein ZEAMMB73_411794 [Zea mays]
Length = 633
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 36/127 (28%), Positives = 58/127 (45%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
MIS+F R G ++ +L + E K DVV NSM+ + GD++ + + + E
Sbjct: 466 MISSFGRVGLVDKASELFEEMEDGSCKPDVVTYNSMINCLGKNGDLDEAHMLFKDMQEKG 525
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
PD T+ ILI+ F K +A +M +G P + L+ L + +EA
Sbjct: 526 YDPDVFTYSILIECFGKSNKVDMACSLFDEMVAQGCIPNIVTYNILLDCLERRGKTTEAH 585
Query: 121 SVYNMLR 127
Y L+
Sbjct: 586 KFYETLK 592
>gi|15218284|ref|NP_172453.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75276860|sp|O04504.1|PPR27_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g09820
gi|2160173|gb|AAB60736.1| Similar to N. tabacum salt-inducible protein (gb|U08285)
[Arabidopsis thaliana]
gi|332190378|gb|AEE28499.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 606
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 33/125 (26%), Positives = 62/125 (49%), Gaps = 3/125 (2%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCR---TGDMESVMHVMRKLD 57
+I+A C++G + + + D + +VV N+++ YC+ G M V++++
Sbjct: 229 VINALCKTGKMNKARDVMEDMKVYGCSPNVVSYNTLIDGYCKLGGNGKMYKADAVLKEMV 288
Query: 58 ELAISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHS 117
E +SP+ TF+ILI F K+ + + +M + +P +SLI L S
Sbjct: 289 ENDVSPNLTTFNILIDGFWKDDNLPGSMKVFKEMLDQDVKPNVISYNSLINGLCNGGKIS 348
Query: 118 EALSV 122
EA+S+
Sbjct: 349 EAISM 353
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/96 (26%), Positives = 52/96 (54%), Gaps = 3/96 (3%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ CR+G E K+L +K D+V + ++ YCR G+ +++++ ++
Sbjct: 442 LIAGLCRNGNIEAAKKLFDQLTSK-GLPDLVTFHILMEGYCRKGESRKAAMLLKEMSKMG 500
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAY--RTMVDMHRK 94
+ P + T++I++K +CKE A RT ++ R+
Sbjct: 501 LKPRHLTYNIVMKGYCKEGNLKAATNMRTQMEKERR 536
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/98 (26%), Positives = 50/98 (51%), Gaps = 1/98 (1%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I A+C+ G ++ L + E + DV N ++ CR G++E+ + +L
Sbjct: 407 LIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRNGNIEAAKKLFDQLTSKG 466
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQP 98
+ PD TFHIL++ +C++ A + +M + G +P
Sbjct: 467 L-PDLVTFHILMEGYCRKGESRKAAMLLKEMSKMGLKP 503
Score = 40.0 bits (92), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 20/95 (21%), Positives = 43/95 (45%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ FC++ +E + G + + + N ++ AYC+ G ++ + +++
Sbjct: 372 LINGFCKNDMLKEALDMFGSVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREG 431
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKG 95
I PD T++ LI C+ A + + KG
Sbjct: 432 IVPDVGTYNCLIAGLCRNGNIEAAKKLFDQLTSKG 466
>gi|317106735|dbj|BAJ53231.1| JHL06P13.11 [Jatropha curcas]
Length = 826
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/92 (25%), Positives = 43/92 (46%)
Query: 4 AFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISP 63
C+ G EE + L K ++V N+++ YC+ GD+E + ++L P
Sbjct: 211 GLCKEGKVEEGRHLIEKRWGKGCVPNIVFYNTLIDGYCKNGDIERANLLFKELKVKGFLP 270
Query: 64 DYNTFHILIKYFCKEKMYMLAYRTMVDMHRKG 95
T+ +I FCK+ + + +V+M +G
Sbjct: 271 TVKTYGAMINAFCKKGKFEAVDKLLVEMKERG 302
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 28/52 (53%)
Query: 27 KYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKE 78
K +VV S++ +CR GD+ V ++ P+ T+ ILI YFCKE
Sbjct: 584 KPNVVTFTSLINGFCRNGDLNRAEKVFEEMRSFGFEPNVVTYTILIGYFCKE 635
Score = 42.0 bits (97), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 22/107 (20%), Positives = 54/107 (50%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I AF ++G + +L + + D++ +++ G+++ + V K+ E
Sbjct: 383 LIHAFSKNGEYVRASELLIEMSERGHTLDLIAYGALVHGLVVAGEVDVALTVRDKMMERG 442
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLI 107
I PD N +++L+ CK+ + A + +V+M + P+ + ++L+
Sbjct: 443 ILPDANIYNVLMSGLCKKGRFPAAKQLLVEMLDQNVTPDAFVNATLV 489
Score = 37.7 bits (86), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 31/127 (24%), Positives = 54/127 (42%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ F R G +E K+L + VV N+M+ YC+ G M + +++
Sbjct: 488 LVDGFIRHGNLDEAKKLFQLTIERGIDTSVVECNAMIKGYCKYGMMNDALLCFKRMFNGV 547
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
SPD T+ +I + K+ A R M +K +P +SLI + + A
Sbjct: 548 HSPDEFTYSTIIDGYVKQNDLRGALRMFGLMLKKTCKPNVVTFTSLINGFCRNGDLNRAE 607
Query: 121 SVYNMLR 127
V+ +R
Sbjct: 608 KVFEEMR 614
>gi|147840993|emb|CAN64120.1| hypothetical protein VITISV_037241 [Vitis vinifera]
Length = 418
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/125 (24%), Positives = 55/125 (44%)
Query: 27 KYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYMLAYR 86
K D V N+M+ +C D E+ V+ ++ PD +++++I CKE + A
Sbjct: 286 KPDTVTYNAMISGFCNEKDFEAAYGVLEEMVVKGCKPDVISYNVIISGLCKEGKWREAND 345
Query: 87 TMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVYNMLRYSKRSMCKALHEKILHILI 146
DM R+G P+ L L + +EA + + + + + A K + L
Sbjct: 346 LFEDMPRRGCTPDVGSYRILFDGLCEGMQFNEAAFILDEMVFKGYAPKSASXTKFVEALC 405
Query: 147 SGKLL 151
SG+ L
Sbjct: 406 SGREL 410
Score = 41.6 bits (96), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 24/99 (24%), Positives = 47/99 (47%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ CR +L + A + D + ++++ A + G + V V+ ++ E
Sbjct: 225 LMKGLCRVNELSLAFELKKEMVANKLRLDSGIYSTLIAALFKVGRKDEVFVVLEEMRENG 284
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPE 99
PD T++ +I FC EK + AY + +M KG +P+
Sbjct: 285 CKPDTVTYNAMISGFCNEKDFEAAYGVLEEMVVKGCKPD 323
>gi|242056929|ref|XP_002457610.1| hypothetical protein SORBIDRAFT_03g010260 [Sorghum bicolor]
gi|241929585|gb|EES02730.1| hypothetical protein SORBIDRAFT_03g010260 [Sorghum bicolor]
Length = 1089
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 33/148 (22%), Positives = 63/148 (42%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I CR G E+ + E K +++ S++ +C+ +E ++RKL++
Sbjct: 281 VIDGLCREGSVEKVMGFLDEMEQVDAKPNLITYTSLVGGFCKRDRLEDAFSIVRKLEQTG 340
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ D + ILI CK + A+ + +M KG + +++I L K +AL
Sbjct: 341 VVVDEYVYSILIDSLCKMEDLDRAFSLLTEMENKGIKASIITYNAIINGLCKAGHTEKAL 400
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISG 148
+ + + LH I I+G
Sbjct: 401 EISEGVAADNFTYSTLLHGYINRGDITG 428
Score = 43.1 bits (100), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 34/76 (44%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I A CR G ++ QL K K + N ++ YC G E + +M L+EL
Sbjct: 797 LIGALCREGLLDDADQLFQKMSTKGIKPTTRVYNLLISGYCNFGLTEKALELMSHLEELF 856
Query: 61 ISPDYNTFHILIKYFC 76
+ PD T +I C
Sbjct: 857 LLPDCFTLGAIINGLC 872
Score = 40.4 bits (93), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 33/129 (25%), Positives = 59/129 (45%), Gaps = 13/129 (10%)
Query: 29 DVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYMLAYRTM 88
D + +++ CR G +E VM + +++++ P+ T+ L+ FCK A+ +
Sbjct: 274 DAINYTTVIDGLCREGSVEKVMGFLDEMEQVDAKPNLITYTSLVGGFCKRDRLEDAFSIV 333
Query: 89 VDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVY----------NMLRYSK--RSMCKA 136
+ + G +E + S LI L KM A S+ +++ Y+ +CKA
Sbjct: 334 RKLEQTGVVVDEYVYSILIDSLCKMEDLDRAFSLLTEMENKGIKASIITYNAIINGLCKA 393
Query: 137 LH-EKILHI 144
H EK L I
Sbjct: 394 GHTEKALEI 402
Score = 37.4 bits (85), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 24/107 (22%), Positives = 46/107 (42%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ C+ G E+ L + + ++++ NS+L C G + + L+
Sbjct: 727 VVDGLCKGGYLEKALDLCESMKKEGFHPNIIIHNSVLSGLCHQGCLTEAFRLFDYLENSN 786
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLI 107
+ P T+ ILI C+E + A + M KG +P + + LI
Sbjct: 787 MLPTIITYTILIGALCREGLLDDADQLFQKMSTKGIKPTTRVYNLLI 833
Score = 35.4 bits (80), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 27/128 (21%), Positives = 50/128 (39%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++S C GC E +L E ++ ++ A CR G ++ + +K+
Sbjct: 762 VLSGLCHQGCLTEAFRLFDYLENSNMLPTIITYTILIGALCREGLLDDADQLFQKMSTKG 821
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
I P +++LI +C + A M + P+ ++I L AL
Sbjct: 822 IKPTTRVYNLLISGYCNFGLTEKALELMSHLEELFLLPDCFTLGAIINGLCLKGETEAAL 881
Query: 121 SVYNMLRY 128
S +N R+
Sbjct: 882 SFFNEYRH 889
>gi|41152687|dbj|BAD08212.1| hypothetical protein [Oryza sativa Indica Group]
gi|46091163|dbj|BAD13710.1| PPR protein [Oryza sativa Indica Group]
gi|67906116|dbj|BAE00068.1| PPR protein [Oryza sativa Indica Group]
gi|114437073|gb|ABI74690.1| fertility restorer [Oryza sativa Indica Group]
Length = 683
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 36/154 (23%), Positives = 68/154 (44%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I + C+ G E+++L K D++ ++++ YC G M+ ++ + +
Sbjct: 374 IIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVG 433
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ PD T+ LI +CK A +M G P+ + ++ L + R + A
Sbjct: 434 MKPDCVTYSTLINGYCKISRMKDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAK 493
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLKDA 154
+Y + S R + + + ILH L KL DA
Sbjct: 494 ELYVGITKSGRQLELSTYNIILHGLCKNKLTDDA 527
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/126 (21%), Positives = 61/126 (48%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I +C +G +E +L + K D V ++++ YC+ M+ + + R+++
Sbjct: 409 LIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYSTLINGYCKISRMKDALVLFREMESSG 468
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+SPD T++I+++ + + A V + + G Q E + ++ L K + +AL
Sbjct: 469 VSPDIITYNIILQGLFQTRRTAAAKELYVGITKSGRQLELSTYNIILHGLCKNKLTDDAL 528
Query: 121 SVYNML 126
++ L
Sbjct: 529 RMFQNL 534
Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 21/99 (21%), Positives = 47/99 (47%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+A C++ ++ ++ D + NS++ +C +G + + ++K+
Sbjct: 129 IIAALCKAQTVDKAMEVLTTMVKSGVMPDCMTYNSIVHGFCSSGQPKEAIVFLKKMRSDG 188
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPE 99
+ PD T++ L+ Y CK A + M ++G +PE
Sbjct: 189 VEPDVVTYNSLMDYLCKNGRCTEARKIFDSMTKRGLKPE 227
Score = 41.6 bits (96), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 29/133 (21%), Positives = 63/133 (47%), Gaps = 2/133 (1%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ F + G ++T + + +VV NS++ A C+ ++ M V+ + +
Sbjct: 94 VINGFFKEGDLDKTYSTYNEMLDQRISPNVVTYNSIIAALCKAQTVDKAMEVLTTMVKSG 153
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ PD T++ ++ FC A + M G +P+ +SL+ +L K +EA
Sbjct: 154 VMPDCMTYNSIVHGFCSSGQPKEAIVFLKKMRSDGVEPDVVTYNSLMDYLCKNGRCTEAR 213
Query: 121 SVYNMLRYSKRSM 133
+++ + +KR +
Sbjct: 214 KIFDSM--TKRGL 224
Score = 39.7 bits (91), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 30/154 (19%), Positives = 63/154 (40%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ FC SG +E + + DVV NS++ C+ G + + +
Sbjct: 164 IVHGFCSSGQPKEAIVFLKKMRSDGVEPDVVTYNSLMDYLCKNGRCTEARKIFDSMTKRG 223
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ P+ T+ L++ + + + + + M R G P + S L+ K EA+
Sbjct: 224 LKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILVCAYAKQEKVEEAM 283
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLKDA 154
V++ +R + + ++ IL ++DA
Sbjct: 284 LVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDA 317
>gi|356529971|ref|XP_003533559.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g19890-like [Glycine max]
Length = 693
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/100 (26%), Positives = 47/100 (47%), Gaps = 1/100 (1%)
Query: 1 MISAFCRSGCFEETKQLAGDF-EAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDEL 59
+I C+ G E+ +L ++ K +V+ +M+ YCR M ++ ++ E
Sbjct: 313 LIDGLCKKGWTEKAFRLFLKLVRSENHKPNVLTYTAMISGYCRDEKMNRAEMLLSRMKEQ 372
Query: 60 AISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPE 99
++P+ NT+ LI CK + AY M M+ +G P
Sbjct: 373 GLAPNTNTYTTLIDGHCKAGNFERAYELMNVMNEEGFSPN 412
Score = 42.4 bits (98), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 26/124 (20%), Positives = 54/124 (43%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
MIS +CR + L + + + +++ +C+ G+ E +M ++E
Sbjct: 349 MISGYCRDEKMNRAEMLLSRMKEQGLAPNTNTYTTLIDGHCKAGNFERAYELMNVMNEEG 408
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
SP+ T++ ++ CK+ AY+ + R G ++ + LI K +AL
Sbjct: 409 FSPNVCTYNAIVDGLCKKGRVQEAYKVLKSGFRNGLDADKVTYTILISEHCKQAEIKQAL 468
Query: 121 SVYN 124
++N
Sbjct: 469 VLFN 472
Score = 38.1 bits (87), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 25/123 (20%), Positives = 53/123 (43%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
M+ +C+ G E+ + G + D L+ ++ +C G + + R+ E+
Sbjct: 208 MVVGYCKLGNVLESDRWLGGMIERGFVVDNATLSLIVREFCEKGFVTRALWYFRRFCEMG 267
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ P+ F +I+ CK A+ + +M +G +P ++LI L K +A
Sbjct: 268 LRPNLINFTCMIEGLCKRGSVKQAFEMLEEMVGRGWKPNVYTHTALIDGLCKKGWTEKAF 327
Query: 121 SVY 123
++
Sbjct: 328 RLF 330
Score = 37.7 bits (86), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 25/108 (23%), Positives = 49/108 (45%), Gaps = 2/108 (1%)
Query: 1 MISAFCRSGCFEET-KQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDEL 59
++ C+ G +E K L F D D V ++ +C+ +++ + + K+ +
Sbjct: 419 IVDGLCKKGRVQEAYKVLKSGFRNGLDA-DKVTYTILISEHCKQAEIKQALVLFNKMVKS 477
Query: 60 AISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLI 107
I PD +++ LI FC+EK + + R G P + +S+I
Sbjct: 478 GIQPDIHSYTTLIAVFCREKRMKESEMFFEEAVRFGLVPTNKTYTSMI 525
Score = 36.6 bits (83), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 25/107 (23%), Positives = 46/107 (42%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C++G FE +L + +V N+++ C+ G ++ V++
Sbjct: 384 LIDGHCKAGNFERAYELMNVMNEEGFSPNVCTYNAIVDGLCKKGRVQEAYKVLKSGFRNG 443
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLI 107
+ D T+ ILI CK+ A M + G QP+ ++LI
Sbjct: 444 LDADKVTYTILISEHCKQAEIKQALVLFNKMVKSGIQPDIHSYTTLI 490
Score = 36.2 bits (82), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 22/82 (26%), Positives = 40/82 (48%), Gaps = 8/82 (9%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLN----SMLCAYCRTGDMESVMHVMRKL 56
+I+ FCR +E++ FE ++ +V N SM+C YCR G++ + ++
Sbjct: 489 LIAVFCREKRMKESEMF---FEEAV-RFGLVPTNKTYTSMICGYCREGNLRLALKFFHRM 544
Query: 57 DELAISPDYNTFHILIKYFCKE 78
+ + D T+ LI CK+
Sbjct: 545 SDHGCASDSITYGALISGLCKQ 566
>gi|242073384|ref|XP_002446628.1| hypothetical protein SORBIDRAFT_06g019140 [Sorghum bicolor]
gi|241937811|gb|EES10956.1| hypothetical protein SORBIDRAFT_06g019140 [Sorghum bicolor]
Length = 614
Score = 47.0 bits (110), Expect = 0.003, Method: Composition-based stats.
Identities = 29/112 (25%), Positives = 52/112 (46%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I A C+ G +L + + K D+V N++ CR D+++ ++ ++
Sbjct: 355 LIDAHCKEGNVAAGLELHREMATRGIKTDLVAYNALANGLCRVRDLKAANDIVEEMRNNG 414
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGK 112
+ PD T+ LI FCKE +A +M +G +E ++LI L K
Sbjct: 415 LKPDKVTYTTLIDGFCKEGELDMAMEMKQEMSDEGVALDEVTYTTLISGLSK 466
Score = 43.1 bits (100), Expect = 0.037, Method: Composition-based stats.
Identities = 28/101 (27%), Positives = 44/101 (43%), Gaps = 6/101 (5%)
Query: 1 MISAFCRSGCFE---ETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLD 57
+I FC+ G + E KQ D D+ L S L R+ D E ++ M
Sbjct: 425 LIDGFCKEGELDMAMEMKQEMSDEGVALDEVTYTTLISGLSKSGRSVDSERILCEMM--- 481
Query: 58 ELAISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQP 98
E + PD T+ ++I FCK ++ + +M KG +P
Sbjct: 482 EAGLEPDNTTYTMVIDAFCKNSDVKTGFKLLKEMQNKGRKP 522
Score = 38.1 bits (87), Expect = 1.3, Method: Composition-based stats.
Identities = 20/77 (25%), Positives = 40/77 (51%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I AFC++ + +L + + K K VV N ++ +C G M++ ++ + +
Sbjct: 495 VIDAFCKNSDVKTGFKLLKEMQNKGRKPGVVTYNVVMNGFCILGQMKNADMLLNAMLNIG 554
Query: 61 ISPDYNTFHILIKYFCK 77
+ PD T++IL+ CK
Sbjct: 555 VCPDDITYNILLDGHCK 571
Score = 35.4 bits (80), Expect = 8.6, Method: Composition-based stats.
Identities = 17/106 (16%), Positives = 51/106 (48%)
Query: 2 ISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAI 61
+ C++G ++ ++ + + + V+ +++ A+C+ G++ + + + R++ I
Sbjct: 321 MQGLCKAGRIQDAVEMFEEMRERGVNPNTVVFTTLIDAHCKEGNVAAGLELHREMATRGI 380
Query: 62 SPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLI 107
D ++ L C+ + A + +M G +P++ ++LI
Sbjct: 381 KTDLVAYNALANGLCRVRDLKAANDIVEEMRNNGLKPDKVTYTTLI 426
Score = 35.4 bits (80), Expect = 8.7, Method: Composition-based stats.
Identities = 17/78 (21%), Positives = 35/78 (44%)
Query: 30 VVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYMLAYRTMV 89
VV N+++ C+ D+ S + + + ++PD T+ ++ CK A
Sbjct: 279 VVTFNTLMSGMCKASDLNSANALRGLMAKAGVAPDVYTYGAFMQGLCKAGRIQDAVEMFE 338
Query: 90 DMHRKGHQPEEELCSSLI 107
+M +G P + ++LI
Sbjct: 339 EMRERGVNPNTVVFTTLI 356
>gi|255583549|ref|XP_002532531.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223527743|gb|EEF29847.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 212
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/88 (25%), Positives = 45/88 (51%)
Query: 13 ETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILI 72
E ++LA + + K D + +++ YC+ GD+ES + + + + + D F +I
Sbjct: 3 EARKLADEMNERCQKPDKITYTTLIDGYCKEGDLESALEIRNIMIKEGVELDIVAFTAII 62
Query: 73 KYFCKEKMYMLAYRTMVDMHRKGHQPEE 100
CKE + A R + +M + G +P++
Sbjct: 63 SGLCKEGKVIDAERALREMLKAGFKPDD 90
Score = 43.5 bits (101), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 19/98 (19%), Positives = 45/98 (45%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I +C+ G E ++ + + D+V +++ C+ G + +R++ +
Sbjct: 26 LIDGYCKEGDLESALEIRNIMIKEGVELDIVAFTAIISGLCKEGKVIDAERALREMLKAG 85
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQP 98
PD T+ +++ FCK+ ++ + +M GH P
Sbjct: 86 FKPDDATYTMVMDGFCKKGDMKTGFKLLKEMQSDGHVP 123
Score = 36.6 bits (83), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 18/77 (23%), Positives = 39/77 (50%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ FC+ G + +L + ++ VV N ++ YC+ M++ ++ + L
Sbjct: 96 VMDGFCKKGDMKTGFKLLKEMQSDGHVPGVVTYNVLMNGYCKQSQMKNANMLLDAMMNLG 155
Query: 61 ISPDYNTFHILIKYFCK 77
+ PD T++IL++ CK
Sbjct: 156 VVPDDITYNILLEGHCK 172
>gi|15229107|ref|NP_190493.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75183725|sp|Q9M3A8.1|PP273_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g49240; AltName: Full=Protein EMBRYO DEFECTIVE 1796
gi|6723394|emb|CAB66403.1| putative protein [Arabidopsis thaliana]
gi|20466250|gb|AAM20442.1| putative protein [Arabidopsis thaliana]
gi|31711738|gb|AAP68225.1| At3g49240 [Arabidopsis thaliana]
gi|58013028|gb|AAW62967.1| mitochondrial embryo-defective 1796 [Arabidopsis thaliana]
gi|332644993|gb|AEE78514.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 629
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 38/162 (23%), Positives = 69/162 (42%), Gaps = 11/162 (6%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDK-----YDVVLLNSMLCAYCRTGDMESVMHVMRK 55
++ A +G F+E +L + +++ ++ N M+ YC G E M V R+
Sbjct: 316 VLEALSENGKFDEALKLFDAVKKEHNPPRHLAVNLGTFNVMVNGYCAGGKFEEAMEVFRQ 375
Query: 56 LDELAISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEE---ELCSSLIFHLGK 112
+ + SPD +F+ L+ C ++ A + +M K +P+E L F GK
Sbjct: 376 MGDFKCSPDTLSFNNLMNQLCDNELLAEAEKLYGEMEEKNVKPDEYTYGLLMDTCFKEGK 435
Query: 113 MRAHSEALSVYNMLRYSKRSMCKALHEKILHILISGKLLKDA 154
+ E + Y + S A++ ++ LI L DA
Sbjct: 436 I---DEGAAYYKTMVESNLRPNLAVYNRLQDQLIKAGKLDDA 474
>gi|357507167|ref|XP_003623872.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355498887|gb|AES80090.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 539
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/103 (28%), Positives = 48/103 (46%), Gaps = 7/103 (6%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C+ G +E L + + DV NSM+ +C G ++ + + LDE+
Sbjct: 216 VIDGLCKQGLVDEACGLCTEMVENGIELDVYSYNSMIHGFCSVGRFQAAVKL---LDEMV 272
Query: 61 IS----PDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPE 99
+ PD TF+ILI CK AY + M ++G +P+
Sbjct: 273 VRGKVYPDVYTFNILIDGLCKLGRVSEAYNVVAVMIKRGWKPD 315
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 42/170 (24%), Positives = 70/170 (41%), Gaps = 20/170 (11%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C+ G E + + K D+V N+++ YC +G + V K+ E
Sbjct: 287 LIDGLCKLGRVSEAYNVVAVMIKRGWKPDIVSYNALMNGYCLSGSVGEAKQVFDKMVERT 346
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGK-------- 112
P+ ++ LI +CK +M A + +MH K P+ + L+ L K
Sbjct: 347 ALPNVISYCTLINGYCKVRMVDEAMVLLTEMHNKNLVPDTVTYNCLLDGLSKSGRSLYEW 406
Query: 113 -----MRAHSEA--LSVYNML-----RYSKRSMCKALHEKILHILISGKL 150
MRA + L YN+L ++ K AL + I+ I IS +
Sbjct: 407 DLVEAMRASGQPADLITYNVLLDDYFKHEKFDKALALFQHIIEIGISPNI 456
>gi|359493281|ref|XP_002272603.2| PREDICTED: pentatricopeptide repeat-containing protein At5g55840-like
[Vitis vinifera]
Length = 2037
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/110 (22%), Positives = 51/110 (46%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C++G +E QL G+ DV+ +S++ +CR G+++S ++ ++
Sbjct: 1200 LIDGLCKNGMLDEAVQLVGNMYKDGVNPDVITYSSLINGFCRVGNIKSAKEIICRMYRSG 1259
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHL 110
+ + + LI FC+ A + M+ GH + C+ L+ L
Sbjct: 1260 LVLNKIIYSTLIYNFCQHGNVTEAMKVYAVMNCNGHGADHFTCNVLVSSL 1309
Score = 38.1 bits (87), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 20/91 (21%), Positives = 37/91 (40%)
Query: 5 FCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPD 64
FCR E +L G E K DVV N ++ C GD + + ++ + P+
Sbjct: 1765 FCRDAKIAEALKLKGVMELCGLKLDVVAYNVLIMGMCANGDSAAAFELYEEMRHRDLCPN 1824
Query: 65 YNTFHILIKYFCKEKMYMLAYRTMVDMHRKG 95
T+ +L+ + + + D+ +G
Sbjct: 1825 ITTYAVLVDAISAANNLIQGEKLLTDLQERG 1855
Score = 36.6 bits (83), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 27/124 (21%), Positives = 50/124 (40%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ C G ++ L E +V N++L YC+ G ++ + ++ +
Sbjct: 990 LINGLCVEGNLKKAGNLLKQMEENGFVPTIVTYNTLLNWYCKKGRYKAAIELIDYMICKG 1049
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
I D T+++ I C AY + M ++ P E ++LI K A
Sbjct: 1050 IEADVCTYNVFIDNLCTNHRSAKAYLLLKKMRKEMISPNEVTYNTLINGFVKEGKIGVAA 1109
Query: 121 SVYN 124
V+N
Sbjct: 1110 QVFN 1113
Score = 36.2 bits (82), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 16/78 (20%), Positives = 36/78 (46%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ C+ G E K+ D V+ N++L C++G++ + + K+ +
Sbjct: 1375 LLKGLCKGGNLVEAKKFLNRLHYIPGAVDSVMYNTLLAETCKSGNLHEAVALFDKMVQNN 1434
Query: 61 ISPDYNTFHILIKYFCKE 78
+ PD T+ L+ C++
Sbjct: 1435 VLPDSYTYSSLLTGLCRK 1452
Score = 35.8 bits (81), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 26/107 (24%), Positives = 47/107 (43%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C G FEE +L EA + + V ++L C+ E ++ ++
Sbjct: 1130 LIGGHCHVGDFEEALRLLDHMEAAGLRLNEVTYGTLLNGLCKHEKFELAKRLLERMRVND 1189
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLI 107
+ + + +LI CK M A + + +M++ G P+ SSLI
Sbjct: 1190 MVVGHIAYTVLIDGLCKNGMLDEAVQLVGNMYKDGVNPDVITYSSLI 1236
>gi|224713522|gb|ACN62068.1| PPR-814b [Zea mays]
Length = 814
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/125 (22%), Positives = 59/125 (47%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I A+ G ++ + + K DVV +++ A CR G M+ M ++ +
Sbjct: 400 LIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQG 459
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
++PD +H LI+ FC + A + ++ G + SS+I +L K+ +A
Sbjct: 460 VAPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQ 519
Query: 121 SVYNM 125
+++++
Sbjct: 520 NIFDL 524
Score = 39.7 bits (91), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 22/99 (22%), Positives = 46/99 (46%)
Query: 29 DVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYMLAYRTM 88
DVV ++++ + + GD+ + +++ + I PD+ T+ ++ CK + A +
Sbjct: 218 DVVAYSTVIDGFFKEGDVNKACDLFKEMVQRGIPPDFVTYSSVVHALCKARAMDKAEAFL 277
Query: 89 VDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVYNMLR 127
M KG P ++LI+ EA+ V+ +R
Sbjct: 278 RQMVNKGVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMR 316
Score = 37.0 bits (84), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 24/103 (23%), Positives = 44/103 (42%)
Query: 10 CFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFH 69
CF+E L + A K +++ LN+M+ +T +E + + + P T+
Sbjct: 654 CFDEAIFLFKELRAMNVKINIITLNTMIAGMFQTRRVEEAKDLFASISRSGLVPCVVTYS 713
Query: 70 ILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGK 112
I+I KE + A M G +P+ L + ++ L K
Sbjct: 714 IMITNLIKEGLVEEAEDMFSSMQNAGCEPDSRLLNHVVRELLK 756
Score = 35.4 bits (80), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 24/123 (19%), Positives = 50/123 (40%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I FC G + K+L + D+V +S++ C+ G + ++ +
Sbjct: 470 LIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIFDLTVNVG 529
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ P + +L+ +C A R M G +P + + +L+ K+ E L
Sbjct: 530 LHPTAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNDVVYGTLVNGYCKIGRIDEGL 589
Query: 121 SVY 123
S++
Sbjct: 590 SLF 592
>gi|255552099|ref|XP_002517094.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223543729|gb|EEF45257.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 549
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/129 (22%), Positives = 59/129 (45%)
Query: 29 DVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYMLAYRTM 88
D N +L YC+ ++ +M ++D+ P+ ++ I+ +CK K +
Sbjct: 268 DFQSFNILLHGYCKARKLDDARKIMDEMDKQGFQPNVVSYTCFIELYCKLKDFRNVEAIF 327
Query: 89 VDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVYNMLRYSKRSMCKALHEKILHILISG 148
+M K +P + + LGK + ++AL VY M++ + + + ++ +L
Sbjct: 328 SEMQEKSCKPNVITYTIFMHALGKAKQVNKALEVYEMMKSNCCVPDASFYSSLIFVLTQS 387
Query: 149 KLLKDAYIV 157
LKDA+ V
Sbjct: 388 GRLKDAWDV 396
Score = 37.4 bits (85), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 18/79 (22%), Positives = 43/79 (54%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I +SG ++ + D + + D++ N+M+ + C + E+ + ++R+++E +
Sbjct: 380 LIFVLTQSGRLKDAWDVFEDMKKQGVSPDLLTYNTMITSACTHLEEENALKLLRRMEEDS 439
Query: 61 ISPDYNTFHILIKYFCKEK 79
PD T+ L+K C++K
Sbjct: 440 CKPDIQTYAPLLKMCCRKK 458
>gi|357481229|ref|XP_003610900.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355512235|gb|AES93858.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1508
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 38/154 (24%), Positives = 67/154 (43%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+ISA R +E + E+ + D+ N+M+ Y R G H+ KL
Sbjct: 342 LISACSRESNLKEAIGVFSHMESNRCQPDLWTYNAMISVYGRCGFALKAEHLFEKLKSNG 401
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
SPD T++ L+ F KE +M + G +E +++I GK H EAL
Sbjct: 402 FSPDAVTYNSLLYAFSKEGNTEKVRDISEEMVKMGFGKDEMTYNTIIHMYGKHGRHDEAL 461
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLKDA 154
+Y ++ S R+ + ++ +L +++A
Sbjct: 462 RLYRDMKSSGRNPDAVTYTVLIDLLGKASKIEEA 495
Score = 45.1 bits (105), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 33/122 (27%), Positives = 54/122 (44%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
MIS + R G + + L ++ D V NS+L A+ + G+ E V + ++ ++
Sbjct: 377 MISVYGRCGFALKAEHLFEKLKSNGFSPDAVTYNSLLYAFSKEGNTEKVRDISEEMVKMG 436
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
D T++ +I + K + A R DM G P+ + LI LGK EA
Sbjct: 437 FGKDEMTYNTIIHMYGKHGRHDEALRLYRDMKSSGRNPDAVTYTVLIDLLGKASKIEEAS 496
Query: 121 SV 122
V
Sbjct: 497 KV 498
Score = 41.2 bits (95), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 34/157 (21%), Positives = 76/157 (48%), Gaps = 4/157 (2%)
Query: 6 CRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDY 65
+S F+ QL D + L SM+ YCR G E+ H++ ++ I D
Sbjct: 728 TKSEQFDIASQLFSDMRFNGVEPSECLYQSMVSVYCRIGFPETAQHLLYHAEKNDIILDN 787
Query: 66 NTFHI--LIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVY 123
T HI +I+ + K KM+ A + ++ ++ + + ++ ++LI + A +++
Sbjct: 788 VTVHIIDIIETYGKLKMWQSAESIVENLRQRCSKMDRKVWNALIHAYAFSGCYERARAIF 847
Query: 124 N-MLRYSKRSMCKALHEKILHILISGKLLKDAYIVVK 159
N M+R ++++ + +++ G+ L + Y+V++
Sbjct: 848 NTMMREGPSPTVESVNGLLQALIVDGR-LSELYVVIQ 883
Score = 41.2 bits (95), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 26/127 (20%), Positives = 57/127 (44%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
MI CR + + + + K D+ + NS+L Y + +++ + + + +
Sbjct: 935 MIGLLCRFKRVRDVRVMLSEMGEAGFKPDLQIFNSVLKLYSSIEEFQNMGVIYQMIQDAG 994
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
++PD T++ LI +C++ M M G +P+ + S+I K + + +A
Sbjct: 995 LAPDEETYNTLITMYCRDHRPEEGLSLMHKMKSLGLEPKRDTYRSMIAAFSKQQLYDQAE 1054
Query: 121 SVYNMLR 127
++ LR
Sbjct: 1055 ELFEELR 1061
Score = 38.1 bits (87), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 29/129 (22%), Positives = 56/129 (43%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ AF + G E+ + ++ + D + N+++ Y + G + + + R +
Sbjct: 412 LLYAFSKEGNTEKVRDISEEMVKMGFGKDEMTYNTIIHMYGKHGRHDEALRLYRDMKSSG 471
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+PD T+ +LI K A + M +M G +P S+LI K+ EA
Sbjct: 472 RNPDAVTYTVLIDLLGKASKIEEASKVMSEMLDAGVKPTLHTYSALICAYAKVGRRVEAE 531
Query: 121 SVYNMLRYS 129
+N +R S
Sbjct: 532 ETFNRMRES 540
Score = 35.4 bits (80), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 21/95 (22%), Positives = 45/95 (47%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
MI+AF + +++ ++L + + K D + M+ Y +GD + +++ + E
Sbjct: 1040 MIAAFSKQQLYDQAEELFEELRSNGYKLDRSFYHLMMKMYRTSGDHQKAENLLEIMKEAG 1099
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKG 95
I P+ T H+L+ + K A R + ++ G
Sbjct: 1100 IEPNTATMHLLMVSYGKSGQPEEADRILKNLRTMG 1134
>gi|302791469|ref|XP_002977501.1| hypothetical protein SELMODRAFT_50901 [Selaginella moellendorffii]
gi|300154871|gb|EFJ21505.1| hypothetical protein SELMODRAFT_50901 [Selaginella moellendorffii]
Length = 233
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 35/148 (23%), Positives = 66/148 (44%), Gaps = 1/148 (0%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ +C +G ++ K+L + A DV S++ +C+ + V V++++ +
Sbjct: 84 LVEGYCNAGLVDDAKRLLEEMVASDCSPDVYTYTSLVDGFCKVRRLVEVRRVLKRMAKRG 143
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
P+ T+ LI FC+ +AY+ + +M G QP SLI + ++
Sbjct: 144 CQPNVVTYTALIDAFCRAGKPTVAYKLLEEMVGNGVQPNVITYRSLIVMMDRLCRTGRMS 203
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISG 148
+V +L K+S H I LI G
Sbjct: 204 AVLELLEAIKQSGTPP-HHNIYVALIRG 230
Score = 35.8 bits (81), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 20/79 (25%), Positives = 40/79 (50%)
Query: 29 DVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYMLAYRTM 88
D+V ++++ YC G ++ ++ ++ SPD T+ L+ FCK + + R +
Sbjct: 77 DIVTFSTLVEGYCNAGLVDDAKRLLEEMVASDCSPDVYTYTSLVDGFCKVRRLVEVRRVL 136
Query: 89 VDMHRKGHQPEEELCSSLI 107
M ++G QP ++LI
Sbjct: 137 KRMAKRGCQPNVVTYTALI 155
>gi|224085950|ref|XP_002307751.1| predicted protein [Populus trichocarpa]
gi|222857200|gb|EEE94747.1| predicted protein [Populus trichocarpa]
Length = 480
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/128 (23%), Positives = 59/128 (46%), Gaps = 3/128 (2%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+IS CR + ++ + K++ DV++ +++ +CR G++ V ++
Sbjct: 170 LISILCRERRASQAQEFFDSLKDKFEP-DVIVYTNLVRGWCRAGNISEAERVFGEMKVAG 228
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLI-FHLGKMRAHSEA 119
I P+ T+ I+I C+ A+ +M G QP +SL+ H+ R +
Sbjct: 229 IKPNVYTYSIVIDSLCRCGQITRAHDIFAEMLDAGCQPNSITYNSLMRIHVKAGRTE-KV 287
Query: 120 LSVYNMLR 127
L VYN ++
Sbjct: 288 LQVYNQMK 295
Score = 41.6 bits (96), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 28/118 (23%), Positives = 53/118 (44%), Gaps = 3/118 (2%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I + CR G + + + + + NS++ + + G E V+ V ++ L
Sbjct: 239 VIDSLCRCGQITRAHDIFAEMLDAGCQPNSITYNSLMRIHVKAGRTEKVLQVYNQMKRLG 298
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSL---IFHLGKMRA 115
PD T++ LI+ CK++ A + + M +KG P ++L I LG + A
Sbjct: 299 CEPDTVTYNFLIETHCKDENLEDAIKVIGLMAKKGCAPNASTFNTLFGCIAKLGDVNA 356
>gi|115443847|ref|NP_001045703.1| Os02g0119700 [Oryza sativa Japonica Group]
gi|41052618|dbj|BAD08127.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|41053255|dbj|BAD07623.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|113535234|dbj|BAF07617.1| Os02g0119700 [Oryza sativa Japonica Group]
gi|125580592|gb|EAZ21523.1| hypothetical protein OsJ_05149 [Oryza sativa Japonica Group]
gi|215766292|dbj|BAG98520.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 367
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 46/97 (47%), Gaps = 2/97 (2%)
Query: 4 AFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISP 63
A CR G E QL K D + N+++ A+C D V+ V+R++ + + P
Sbjct: 148 AVCRRGEPREIAQLLPVLADHGVKADAPVYNALMKAHCAASDPAGVLGVLRRMKDDGVEP 207
Query: 64 DYNTFHILIKYFCKEKMYMLAYRTMVD-MHRKGHQPE 99
D T++ L+ + M A RT +D M GH P+
Sbjct: 208 DLVTYNTLVFGLARAGMVTKA-RTYLDAMAAAGHFPD 243
>gi|15231338|ref|NP_187348.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75186627|sp|Q9M907.1|PP217_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g06920
gi|6728999|gb|AAF26996.1|AC016827_7 hypothetical protein [Arabidopsis thaliana]
gi|332640955|gb|AEE74476.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 871
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 32/155 (20%), Positives = 71/155 (45%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I F + G +E + + K ++ NS+L A + ++ + + + EL
Sbjct: 663 LIDGFGKVGRIDEAYLILEELMQKGLTPNLYTWNSLLDALVKAEEINEALVCFQSMKELK 722
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+P+ T+ ILI CK + + A+ +M ++G +P +++I L K +EA
Sbjct: 723 CTPNQVTYGILINGLCKVRKFNKAFVFWQEMQKQGMKPSTISYTTMISGLAKAGNIAEAG 782
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLKDAY 155
++++ + + A + ++ L +G DA+
Sbjct: 783 ALFDRFKANGGVPDSACYNAMIEGLSNGNRAMDAF 817
Score = 38.1 bits (87), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 31/113 (27%), Positives = 51/113 (45%), Gaps = 8/113 (7%)
Query: 11 FEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHI 70
FEE K+ A + Y+ +L MLC R G +++ + + + + P+ T +I
Sbjct: 366 FEEMKKDAAPNLSTYN-----ILIDMLC---RAGKLDTAFELRDSMQKAGLFPNVRTVNI 417
Query: 71 LIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVY 123
++ CK + A +M K P+E SLI LGK+ +A VY
Sbjct: 418 MVDRLCKSQKLDEACAMFEEMDYKVCTPDEITFCSLIDGLGKVGRVDDAYKVY 470
Score = 38.1 bits (87), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 29/128 (22%), Positives = 57/128 (44%), Gaps = 1/128 (0%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
MI + +G F+E L AK V+ N +L + G ++ + V ++ + A
Sbjct: 314 MIMGYGSAGKFDEAYSLLERQRAKGSIPSVIAYNCILTCLRKMGKVDEALKVFEEMKKDA 373
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+P+ +T++ILI C+ A+ M + G P + ++ L K + EA
Sbjct: 374 -APNLSTYNILIDMLCRAGKLDTAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEAC 432
Query: 121 SVYNMLRY 128
+++ + Y
Sbjct: 433 AMFEEMDY 440
>gi|356557306|ref|XP_003546958.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g65820-like [Glycine max]
Length = 654
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/123 (24%), Positives = 57/123 (46%), Gaps = 1/123 (0%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ A C++G +E L D ++ K V S+L +C+ G + HV+ ++ ++
Sbjct: 233 LLDALCKNGSVKEAASLFEDMRYRW-KPSVKHFTSLLYGWCKEGKLMEAKHVLVQMKDMG 291
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
I PD ++ L+ + + AY + +M RK +P + LI L K EA
Sbjct: 292 IEPDIVVYNNLLGGYAQAGKMGDAYDLLKEMRRKRCEPNATSYTVLIQSLCKHERLEEAT 351
Query: 121 SVY 123
++
Sbjct: 352 RLF 354
Score = 45.1 bits (105), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 25/107 (23%), Positives = 51/107 (47%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ +C+ G E K + + + D+V+ N++L Y + G M +++++
Sbjct: 267 LLYGWCKEGKLMEAKHVLVQMKDMGIEPDIVVYNNLLGGYAQAGKMGDAYDLLKEMRRKR 326
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLI 107
P+ ++ +LI+ CK + A R V+M G Q + S+LI
Sbjct: 327 CEPNATSYTVLIQSLCKHERLEEATRLFVEMQTNGCQADVVTYSTLI 373
Score = 38.1 bits (87), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 28/116 (24%), Positives = 57/116 (49%), Gaps = 2/116 (1%)
Query: 44 GDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELC 103
G + +++ MR+ + I+P F IL++ F +M A + +M + G +P+E +
Sbjct: 173 GAVWALIEEMRQENPHLITP--QVFVILMRRFASARMVHKAVEVLDEMPKYGCEPDEYVF 230
Query: 104 SSLIFHLGKMRAHSEALSVYNMLRYSKRSMCKALHEKILHILISGKLLKDAYIVVK 159
L+ L K + EA S++ +RY + K + GKL++ +++V+
Sbjct: 231 GCLLDALCKNGSVKEAASLFEDMRYRWKPSVKHFTSLLYGWCKEGKLMEAKHVLVQ 286
>gi|295830921|gb|ADG39129.1| AT5G21222-like protein [Neslia paniculata]
Length = 166
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/131 (25%), Positives = 56/131 (42%), Gaps = 2/131 (1%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+++A R F L E K D +L N+++ A +G+++ M + ++ E
Sbjct: 16 LVTALTRQKHFHSLLSLISKVEKNGLKPDTILFNAIINASSESGNLDQAMKIFEQMKESG 75
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGH-QPEEELCSSLIFHLGKMRAHSEA 119
P +TF+ LIK + K + R + M R QP + C+ L+ R EA
Sbjct: 76 CKPTTSTFNTLIKGYGKLGKLEESSRLLEMMLRDEMLQPNDRTCNILVQAWCNQRKVEEA 135
Query: 120 LS-VYNMLRYS 129
VY M Y
Sbjct: 136 WQIVYKMQSYG 146
>gi|255660846|gb|ACU25592.1| pentatricopeptide repeat-containing protein [Tamonea boxiana]
Length = 418
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/98 (22%), Positives = 47/98 (47%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C+ G + +L + + D V +++ C+ G ++R++ +
Sbjct: 317 LIDGNCKEGDLDSAFELRETMVKESIRLDDVAYTALISGLCQEGRATDAEKMLREMLSVG 376
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQP 98
+ PD T+ ++I FCK++ A + + +M R+GH P
Sbjct: 377 LKPDNGTYTMIINEFCKKEDVKTAAKLLKEMQRQGHVP 414
Score = 40.4 bits (93), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 25/103 (24%), Positives = 42/103 (40%)
Query: 5 FCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPD 64
FC+ G + + + VV N+++ Y R GD++ + + + PD
Sbjct: 146 FCKEGEIWIAQSVFDSITKWGLRPSVVSFNTLMNGYIRLGDLDQGFKLKNAMHASGVQPD 205
Query: 65 YNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLI 107
T+ +LI CKE A +M KG P ++LI
Sbjct: 206 VYTYSVLINGLCKESKMNEANDLFNEMLDKGLVPNGVTFTTLI 248
Score = 40.0 bits (92), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 24/107 (22%), Positives = 49/107 (45%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ C+ E L + K + V +++ +C+ G ++S M +++
Sbjct: 212 LINGLCKESKMNEANDLFNEMLDKGLVPNGVTFTTLIDGHCKNGKVDSAMETYKQMLSQC 271
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLI 107
PD T++ LI CK+ A + +M KG +P++ ++LI
Sbjct: 272 FLPDLITYNTLIYGLCKKGDLKQAQDLLDEMRMKGLKPDKITYTTLI 318
>gi|224130706|ref|XP_002328356.1| predicted protein [Populus trichocarpa]
gi|222838071|gb|EEE76436.1| predicted protein [Populus trichocarpa]
Length = 613
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 59/127 (46%)
Query: 28 YDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYMLAYRT 87
++V LN ++ CR ++ + V+ K+ +L I PD TF+ LI C E A
Sbjct: 126 HNVYSLNILINCLCRLNHVDFSVSVLGKMFKLGIHPDAITFNALINGLCNEGKIKEAVEL 185
Query: 88 MVDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVYNMLRYSKRSMCKALHEKILHILIS 147
+M ++GH+P +++I L K S A+ V+ + + + I+ L
Sbjct: 186 FNEMVKRGHEPNVISYTTVINGLCKTGNTSMAVDVFKKMEQNGCKPNVVTYSTIIDSLCK 245
Query: 148 GKLLKDA 154
+L+ DA
Sbjct: 246 DRLVNDA 252
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 23/123 (18%), Positives = 58/123 (47%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ C G +E +L + + + +V+ +++ C+TG+ + V +K+++
Sbjct: 169 LINGLCNEGKIKEAVELFNEMVKRGHEPNVISYTTVINGLCKTGNTSMAVDVFKKMEQNG 228
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
P+ T+ +I CK+++ A + +M +G P +S++ + +EA
Sbjct: 229 CKPNVVTYSTIIDSLCKDRLVNDAMEFLSEMVERGIPPNVFTYNSIVHGFCNLGQLNEAT 288
Query: 121 SVY 123
++
Sbjct: 289 RLF 291
Score = 42.7 bits (99), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 28/127 (22%), Positives = 63/127 (49%), Gaps = 8/127 (6%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ C+ G E + + K + D+ N+++ YC ++ +M+ +K+ E+
Sbjct: 309 LVDGLCKEGMVSEARLVFETMTEKGVEPDISTYNALMDGYC----LQRLMNEAKKVFEIM 364
Query: 61 I----SPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAH 116
I +P ++++ILI +CK + A + +M+ K P+ S+L+ L ++
Sbjct: 365 IRKGCAPGAHSYNILINGYCKSRRMDEAKSLLAEMYHKALNPDTVTYSTLMQGLCQLGRP 424
Query: 117 SEALSVY 123
EAL+++
Sbjct: 425 KEALNLF 431
Score = 40.8 bits (94), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 31/148 (20%), Positives = 63/148 (42%), Gaps = 4/148 (2%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I + C+ + + + + +V NS++ +C G + + +++
Sbjct: 239 IIDSLCKDRLVNDAMEFLSEMVERGIPPNVFTYNSIVHGFCNLGQLNEATRLFKEMVGRD 298
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ P+ TF IL+ CKE M A M KG +P+ ++L+ R +EA
Sbjct: 299 VMPNTVTFTILVDGLCKEGMVSEARLVFETMTEKGVEPDISTYNALMDGYCLQRLMNEAK 358
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISG 148
V+ ++ ++ H +ILI+G
Sbjct: 359 KVFEIM--IRKGCAPGAHS--YNILING 382
Score = 39.3 bits (90), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 28/122 (22%), Positives = 51/122 (41%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ FC G E +L + + + V ++ C+ G + V + E
Sbjct: 274 IVHGFCNLGQLNEATRLFKEMVGRDVMPNTVTFTILVDGLCKEGMVSEARLVFETMTEKG 333
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ PD +T++ L+ +C +++ A + M RKG P + LI K R EA
Sbjct: 334 VEPDISTYNALMDGYCLQRLMNEAKKVFEIMIRKGCAPGAHSYNILINGYCKSRRMDEAK 393
Query: 121 SV 122
S+
Sbjct: 394 SL 395
>gi|224131960|ref|XP_002328150.1| predicted protein [Populus trichocarpa]
gi|222837665|gb|EEE76030.1| predicted protein [Populus trichocarpa]
Length = 347
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/127 (23%), Positives = 57/127 (44%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
M+ C+ G +E +L G K +VV+ +++ +C+ ++ + RK+
Sbjct: 182 MLDGLCKDGLVQEALKLFGTMREKGTIPEVVIYTAVVDGFCKAHKLDDAKRIFRKMQSNG 241
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
I+P+ ++ +LI+ K ++ A +M GH P LI L + + EA
Sbjct: 242 ITPNAFSYAVLIQGLSKCNLFDDAIDFCFEMLELGHSPNVTTFVGLIDGLCREKGVEEAR 301
Query: 121 SVYNMLR 127
+V LR
Sbjct: 302 TVIGTLR 308
>gi|125537837|gb|EAY84232.1| hypothetical protein OsI_05614 [Oryza sativa Indica Group]
Length = 367
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 46/97 (47%), Gaps = 2/97 (2%)
Query: 4 AFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISP 63
A CR G E QL K D + N+++ A+C D V+ V+R++ + + P
Sbjct: 148 AVCRRGEPREIAQLLPVLADHGVKADAPVYNALMKAHCAASDPAGVLGVLRRMKDDGVEP 207
Query: 64 DYNTFHILIKYFCKEKMYMLAYRTMVD-MHRKGHQPE 99
D T++ L+ + M A RT +D M GH P+
Sbjct: 208 DLVTYNTLVFGLARAGMVTKA-RTYLDAMAAAGHFPD 243
>gi|383157596|gb|AFG61137.1| Pinus taeda anonymous locus 0_13807_01 genomic sequence
gi|383157602|gb|AFG61140.1| Pinus taeda anonymous locus 0_13807_01 genomic sequence
gi|383157606|gb|AFG61142.1| Pinus taeda anonymous locus 0_13807_01 genomic sequence
gi|383157616|gb|AFG61147.1| Pinus taeda anonymous locus 0_13807_01 genomic sequence
Length = 133
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/107 (23%), Positives = 50/107 (46%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ C+ +E L + ++ K D+ N ++ +Y + G ME V K++
Sbjct: 4 VITGLCKGEKPDEAMTLLEEMPGRHIKPDIYAYNVIMSSYAKAGKMEKACEVFSKIENDN 63
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLI 107
I + ++ ILI FC++ A+ ++ + G P ++ S LI
Sbjct: 64 IKSHFISYQILIDGFCRQGSLEKAHHYFSELKKSGRWPNKDSYSKLI 110
>gi|224079730|ref|XP_002305930.1| predicted protein [Populus trichocarpa]
gi|222848894|gb|EEE86441.1| predicted protein [Populus trichocarpa]
Length = 470
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/100 (22%), Positives = 49/100 (49%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ FC+ G + +L ++ Y K ++V+ N ++ A C++G+++ + +L +
Sbjct: 331 LLDGFCKQGYLGKAFRLFRAMQSTYLKPNLVMYNILVNAMCKSGNLKDARELFSELFVIG 390
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEE 100
+ P+ + +I CKE + A +M G P+E
Sbjct: 391 LQPNVQIYTTIINGLCKEGLLDEALEAFRNMEDDGCPPDE 430
Score = 38.1 bits (87), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 22/90 (24%), Positives = 45/90 (50%), Gaps = 3/90 (3%)
Query: 37 LCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGH 96
LC + R + ++++ M L+ I P+ TF++L+ FCKE + A + M G
Sbjct: 160 LCNFSRWKEASALLNEMTSLN---IMPNVVTFNVLVDTFCKEGKVLAAEGVLKTMTEMGV 216
Query: 97 QPEEELCSSLIFHLGKMRAHSEALSVYNML 126
+P+ +SL++ EA +++++
Sbjct: 217 EPDVVTYNSLMYGYSMWTEVVEARKLFDVM 246
Score = 37.0 bits (84), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 21/99 (21%), Positives = 44/99 (44%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ +C++ +E KQL + + + V N+++ C+ G + + + +
Sbjct: 261 LINGYCKAKRIDEAKQLFNEMIHQGSTPNNVSYNTLIHGLCQLGRLREAQDLFKNMHTNG 320
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPE 99
P+ T+ IL+ FCK+ A+R M +P
Sbjct: 321 NLPNLYTYAILLDGFCKQGYLGKAFRLFRAMQSTYLKPN 359
>gi|254939549|ref|NP_001157212.1| pentatricopeptide repeat10 [Zea mays]
gi|218684531|gb|ACL01094.1| chloroplast pentatricopeptide repeat protein 10 [Zea mays]
gi|223948163|gb|ACN28165.1| unknown [Zea mays]
gi|413943497|gb|AFW76146.1| pentatricopeptide repeat10 [Zea mays]
Length = 786
Score = 47.0 bits (110), Expect = 0.003, Method: Composition-based stats.
Identities = 28/127 (22%), Positives = 61/127 (48%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+A CR G +E D +A+ VV N++L + + G+ + V+ ++++
Sbjct: 251 VIAACCRDGLVDEAVAFFEDLKARGHAPCVVTYNALLQVFGKAGNYTEALRVLGEMEQNG 310
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
PD T++ L + + + A R + M KG P ++++ G + EAL
Sbjct: 311 CQPDAVTYNELAGTYARAGFFEEAARCLDTMASKGLLPNAFTYNTVMTAYGNVGKVDEAL 370
Query: 121 SVYNMLR 127
++++ ++
Sbjct: 371 ALFDQMK 377
Score = 39.7 bits (91), Expect = 0.41, Method: Composition-based stats.
Identities = 20/112 (17%), Positives = 51/112 (45%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+ + R+G FEE + +K + N+++ AY G ++ + + ++ +
Sbjct: 321 LAGTYARAGFFEEAARCLDTMASKGLLPNAFTYNTVMTAYGNVGKVDEALALFDQMKKTG 380
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGK 112
P+ NT+++++ K+ + + + +M R G P ++++ GK
Sbjct: 381 FVPNVNTYNLVLGMLGKKSRFTVMLEMLGEMSRSGCTPNRVTWNTMLAVCGK 432
Score = 37.4 bits (85), Expect = 2.1, Method: Composition-based stats.
Identities = 26/135 (19%), Positives = 60/135 (44%), Gaps = 2/135 (1%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLD-EL 59
M+S + ++G + + ++ + D++ NS++ Y + + ++ +L
Sbjct: 602 MLSIYAKNGMYSKATEVFDSIKRSGLSPDLITYNSLMDMYAKCSESWEAEKILNQLKCSQ 661
Query: 60 AISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEA 119
+ PD +++ +I FCK+ + A R + +M G P +L+ + SEA
Sbjct: 662 TMKPDVVSYNTVINGFCKQGLVKEAQRVLSEMVADGMAPCAVTYHTLVGGYSSLEMFSEA 721
Query: 120 LSVYN-MLRYSKRSM 133
V M+++ + M
Sbjct: 722 REVIGYMVQHGLKPM 736
Score = 37.0 bits (84), Expect = 2.6, Method: Composition-based stats.
Identities = 32/125 (25%), Positives = 56/125 (44%), Gaps = 5/125 (4%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDEL- 59
++ A R+G +E +L + + +V N +L Y R G S ++ LDE+
Sbjct: 180 VLHALSRAGRYERALELFAELRRQGVAPTLVTYNVVLDVYGRMG--RSWPRIVALLDEMR 237
Query: 60 --AISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHS 117
+ PD T +I C++ + A D+ +GH P ++L+ GK ++
Sbjct: 238 AAGVEPDGFTASTVIAACCRDGLVDEAVAFFEDLKARGHAPCVVTYNALLQVFGKAGNYT 297
Query: 118 EALSV 122
EAL V
Sbjct: 298 EALRV 302
>gi|225464138|ref|XP_002265372.1| PREDICTED: pentatricopeptide repeat-containing protein At5g46100
[Vitis vinifera]
gi|296087974|emb|CBI35257.3| unnamed protein product [Vitis vinifera]
Length = 503
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/142 (23%), Positives = 63/142 (44%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ CR G E K+L + E K VV S++ C++ D++S + ++ ++
Sbjct: 197 LINGLCRLGKIGEAKELFKEMETKACSPTVVTYTSLIHGLCQSKDLDSAIRLLEEMASKG 256
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
I P+ T+ L+ CK A + M + H P S+L+ L K EA+
Sbjct: 257 IKPNVFTYSSLMDGHCKSGCSSRALELLDMMVSRRHLPNMITYSTLVHGLCKEGKLQEAV 316
Query: 121 SVYNMLRYSKRSMCKALHEKIL 142
+ + ++ L+ KI+
Sbjct: 317 EILDRMKLQGLRPDAGLYGKII 338
Score = 38.5 bits (88), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 31/127 (24%), Positives = 56/127 (44%), Gaps = 1/127 (0%)
Query: 1 MISAFCR-SGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDEL 59
+I A C+ SG + ++ + + D +++ CR G + + ++++
Sbjct: 161 LIKALCKNSGTMDAALRIFREMPNRGCPPDSYTYGTLINGLCRLGKIGEAKELFKEMETK 220
Query: 60 AISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEA 119
A SP T+ LI C+ K A R + +M KG +P SSL+ K S A
Sbjct: 221 ACSPTVVTYTSLIHGLCQSKDLDSAIRLLEEMASKGIKPNVFTYSSLMDGHCKSGCSSRA 280
Query: 120 LSVYNML 126
L + +M+
Sbjct: 281 LELLDMM 287
>gi|357455187|ref|XP_003597874.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|124359582|gb|ABD28711.2| Tetratricopeptide-like helical [Medicago truncatula]
gi|355486922|gb|AES68125.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 822
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 40/76 (52%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I FC++G F+ QL + +V + NS++ A + G ++ +MR + E+
Sbjct: 281 LIDGFCKAGKFQVVDQLLNEMNVMGLNVNVKVFNSIIDAKYKYGLVDKAAEMMRMMTEMG 340
Query: 61 ISPDYNTFHILIKYFC 76
PD T++ILI + C
Sbjct: 341 CEPDITTYNILINFSC 356
Score = 45.1 bits (105), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 26/107 (24%), Positives = 48/107 (44%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ C G EE ++L D +VV N ++ YC+ GD++ V +L
Sbjct: 211 VVKGLCDVGKVEEGRKLIDDRWGNGCVPNVVFYNVIIDGYCKKGDLKRATRVFEELKLKG 270
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLI 107
P T+ LI FCK + + + + +M+ G ++ +S+I
Sbjct: 271 FLPTLETYGALIDGFCKAGKFQVVDQLLNEMNVMGLNVNVKVFNSII 317
Score = 36.6 bits (83), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 21/107 (19%), Positives = 49/107 (45%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ A+C+ G + + DK D+V + + G+++ + V K+ E
Sbjct: 386 LMHAYCKQGDYVMASDMLFKIAETGDKPDLVSYGAFIHGSVAGGEIDVALMVREKMMEKG 445
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLI 107
+ PD +++L+ CK+ + A + +M QP+ + ++L+
Sbjct: 446 VFPDAQIYNVLMSGLCKKGRFPAAKLLLSEMLDLNLQPDAYMYATLV 492
>gi|242082678|ref|XP_002441764.1| hypothetical protein SORBIDRAFT_08g002022 [Sorghum bicolor]
gi|241942457|gb|EES15602.1| hypothetical protein SORBIDRAFT_08g002022 [Sorghum bicolor]
Length = 695
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/107 (24%), Positives = 46/107 (42%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I + + G EE +QL + DVV N+++ + + G ME ++
Sbjct: 241 LIDGYGKCGDLEEVEQLVSEMRKSGCAADVVTYNALINCFSKFGRMEKAYSYFGEMKRQG 300
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLI 107
+ + TF + FCKE + A + M +G P E +SL+
Sbjct: 301 VVANVVTFSTFVDAFCKEGLVQEAMKLFAQMRVRGMMPNEFTYTSLV 347
Score = 42.0 bits (97), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 29/127 (22%), Positives = 59/127 (46%), Gaps = 2/127 (1%)
Query: 2 ISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAI 61
+ AFC+ G +E +L + + S++ C+ G ++ + ++ ++ +
Sbjct: 312 VDAFCKEGLVQEAMKLFAQMRVRGMMPNEFTYTSLVDGTCKAGRLDDAIVLLDEMVHQGL 371
Query: 62 SPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSE-AL 120
P+ T+ +++ CKE A + M R G + E L ++LI H M +SE AL
Sbjct: 372 VPNVVTYTVMVDGLCKEGKVAEADNVLSLMERGGVKANELLYTTLI-HGHFMNNNSERAL 430
Query: 121 SVYNMLR 127
+ N ++
Sbjct: 431 DLLNQMK 437
Score = 40.8 bits (94), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 32/127 (25%), Positives = 56/127 (44%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C+ G E + L +A DVV NS++ Y + GD+E V ++ ++ +
Sbjct: 206 VIDFLCKEGELVEARALFVRMKAMGCSPDVVTYNSLIDGYGKCGDLEEVEQLVSEMRKSG 265
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ D T++ LI F K AY +M R+G S+ + K EA+
Sbjct: 266 CAADVVTYNALINCFSKFGRMEKAYSYFGEMKRQGVVANVVTFSTFVDAFCKEGLVQEAM 325
Query: 121 SVYNMLR 127
++ +R
Sbjct: 326 KLFAQMR 332
>gi|224137250|ref|XP_002327079.1| predicted protein [Populus trichocarpa]
gi|222835394|gb|EEE73829.1| predicted protein [Populus trichocarpa]
Length = 795
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/129 (22%), Positives = 66/129 (51%), Gaps = 6/129 (4%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDM---ESVMHVMRKLD 57
+I +C+ G + ++ + K ++ + NS++ YC+ G + E ++ MRKLD
Sbjct: 178 LIDGYCKVGKMGDAIRVRDEMLKVGLKMNLFVCNSLINGYCKNGQVHEGERLLMCMRKLD 237
Query: 58 ELAISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHS 117
+ PD ++ L+ +C++ + A+ M RKG +P ++L+ L + +
Sbjct: 238 ---LKPDSYSYCTLVDGYCRDGLSSKAFNVCDQMLRKGIEPTVVTYNTLLKGLCRFGDYK 294
Query: 118 EALSVYNML 126
+AL +++++
Sbjct: 295 DALRLWHLM 303
Score = 43.1 bits (100), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 59/127 (46%), Gaps = 6/127 (4%)
Query: 1 MISAFCRSGCFEETKQL---AGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLD 57
+I+ +C++G E ++L + K D Y +++ YCR G +V ++
Sbjct: 213 LINGYCKNGQVHEGERLLMCMRKLDLKPDSYSYC---TLVDGYCRDGLSSKAFNVCDQML 269
Query: 58 ELAISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHS 117
I P T++ L+K C+ Y A R M ++G P E +L+ L KM S
Sbjct: 270 RKGIEPTVVTYNTLLKGLCRFGDYKDALRLWHLMLQRGVTPNEVGYCTLLDGLFKMGDFS 329
Query: 118 EALSVYN 124
AL++++
Sbjct: 330 RALTLWD 336
Score = 42.0 bits (97), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 34/143 (23%), Positives = 59/143 (41%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I F +G E L + K ++ N++L C++G ++ + KL
Sbjct: 598 LIHGFSAAGYVNEAFNLRDEMVNKGLVPNITTYNALLNGLCKSGYLDRARRLFDKLHLKG 657
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ P+ T++ILI +CK A M ++G P SSLI K EA+
Sbjct: 658 LIPNVVTYNILIDGYCKSGSPREALDLRGKMLKEGISPSIITYSSLINGFCKQSDVEEAM 717
Query: 121 SVYNMLRYSKRSMCKALHEKILH 143
+ N ++ S A K++
Sbjct: 718 KLLNEMKASNVDQTIATFSKLVE 740
Score = 41.6 bits (96), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 21/78 (26%), Positives = 41/78 (52%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
M++A+C++G E + + E + + V NS++ Y GD+E V++ + E
Sbjct: 72 MVNAYCKAGKVERAVEFVREMEKLGFELNAVSYNSLVDGYVSLGDIEGAKGVLKFMSEKG 131
Query: 61 ISPDYNTFHILIKYFCKE 78
+ + T +LIK +CK+
Sbjct: 132 VMRNKVTLTLLIKGYCKQ 149
Score = 41.6 bits (96), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 26/110 (23%), Positives = 48/110 (43%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ + G F L D A+ + N+M+ C+ G+M+ ++++EL
Sbjct: 318 LLDGLFKMGDFSRALTLWDDILARGINKSIYAFNTMINGLCKMGEMDGAKETFKRMEELG 377
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHL 110
PD T+ L +CK A++ M ++ P E+ +SLI L
Sbjct: 378 CKPDGITYRTLSDGYCKVGNVEEAFKIKEKMEKEEIFPSIEMYNSLIVGL 427
Score = 37.7 bits (86), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 27/123 (21%), Positives = 56/123 (45%), Gaps = 4/123 (3%)
Query: 4 AFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISP 63
+C+ G EE ++ E + + + NS++ + + ++ ++ ++D +SP
Sbjct: 391 GYCKVGNVEEAFKIKEKMEKEEIFPSIEMYNSLIVGLFTSKKISKLIDLLAEMDTRGLSP 450
Query: 64 DYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVY 123
+ T+ LI +C + A+ +M KG P +CS ++ L ++ EA
Sbjct: 451 NVVTYGALIAGWCDQGRLDKAFSAYFEMIGKGFAPNVIICSKIVSSLYRLGRIDEA---- 506
Query: 124 NML 126
NML
Sbjct: 507 NML 509
>gi|168036199|ref|XP_001770595.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162678116|gb|EDQ64578.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 743
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 33/157 (21%), Positives = 70/157 (44%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
MI+A+ ++G +E+ +L + + D V + M+ A R G + + + + L
Sbjct: 191 MITAYGKAGLYEKALRLFEKMKEAGLEPDEVTYSCMIGACGRAGKLRDALDYFQAMKRLG 250
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
I P + F+ LI + K + + R + DM G P+ + +++ + + +
Sbjct: 251 IMPASSNFNTLISLYGKARNVVGIVRVLADMKNFGCTPDSQTLDAVVRAYERAGQTKKVV 310
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLKDAYIV 157
V ++LR + + +LH+ + L K+A V
Sbjct: 311 QVLSLLREAGWVEDTESYGTLLHVYLKCNLQKEALSV 347
Score = 37.7 bits (86), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 29/113 (25%), Positives = 46/113 (40%)
Query: 2 ISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAI 61
++ + + G EE + + E VV NSM+ AY + G E + + K+ E +
Sbjct: 157 MNTYGQQGKIEEAEHIMDTMERLGMHLGVVGYNSMITAYGKAGLYEKALRLFEKMKEAGL 216
Query: 62 SPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMR 114
PD T+ +I + A M R G P ++LI GK R
Sbjct: 217 EPDEVTYSCMIGACGRAGKLRDALDYFQAMKRLGIMPASSNFNTLISLYGKAR 269
Score = 36.6 bits (83), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 22/79 (27%), Positives = 37/79 (46%)
Query: 29 DVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYMLAYRTM 88
D L++++ AY R G + V+ V+ L E D ++ L+ + K + A
Sbjct: 289 DSQTLDAVVRAYERAGQTKKVVQVLSLLREAGWVEDTESYGTLLHVYLKCNLQKEALSVF 348
Query: 89 VDMHRKGHQPEEELCSSLI 107
M + G P+E +C SLI
Sbjct: 349 SAMRKAGMAPKEYMCRSLI 367
>gi|449469290|ref|XP_004152354.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g52620-like [Cucumis sativus]
gi|449484425|ref|XP_004156880.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g52620-like [Cucumis sativus]
Length = 834
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/110 (24%), Positives = 54/110 (49%), Gaps = 6/110 (5%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDK---YDVVLLNSMLCAYCRTGDMESVMHVMRKLD 57
M+ C G E+ +L E+++ K ++V N+++ YC+ G++ES + +KL
Sbjct: 214 MVKGLCLKGRIEDGIKL---IESRWGKGCVPNIVFYNTLIDGYCKKGEVESAYKLFKKLK 270
Query: 58 ELAISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLI 107
P TF L+ FCK M+ +++M +G ++ +++I
Sbjct: 271 MKGFIPTLQTFGSLVNGFCKMGMFEAIDLLLLEMKDRGLSVNVQMYNNII 320
Score = 37.4 bits (85), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 25/119 (21%), Positives = 54/119 (45%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+++ FC+ G FE L + + + +V + N+++ A + G ++++ E
Sbjct: 284 LVNGFCKMGMFEAIDLLLLEMKDRGLSVNVQMYNNIIDARYKLGFDIKAKDTLKEMSENC 343
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEA 119
PD T++ LI +FC A + + R+G P + + L+ K +++A
Sbjct: 344 CEPDLVTYNTLINHFCSRGEVEEAEKLLEQTIRRGLAPNKLTYTPLVHGYCKQGEYTKA 402
>gi|15221671|ref|NP_176495.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75169919|sp|Q9CAN6.1|PPR97_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g63070, mitochondrial; Flags: Precursor
gi|12323265|gb|AAG51617.1|AC010795_21 unknown protein; 38394-36551 [Arabidopsis thaliana]
gi|332195929|gb|AEE34050.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 590
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 33/130 (25%), Positives = 57/130 (43%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ C+ G + L E + DVV+ N+++ C+ M+ + K++
Sbjct: 221 VINGLCKRGEPDLALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKG 280
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
I PD T++ LI C + A R + DM K P+ ++LI K EA
Sbjct: 281 IKPDVFTYNPLISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAE 340
Query: 121 SVYNMLRYSK 130
+Y+ + SK
Sbjct: 341 KLYDEMVKSK 350
Score = 41.2 bits (95), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 30/122 (24%), Positives = 55/122 (45%), Gaps = 4/122 (3%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYD-KYDVVLLNSMLCAYCRTGDMESVMHVMRKLDEL 59
++ C +G E T + ++ K D K D+V +M+ A C+ G +E + L
Sbjct: 432 LLDGLCNNGNVE-TALVVFEYMQKRDMKLDIVTYTTMIEALCKAGKVEDGWDLFCSLSLK 490
Query: 60 AISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEA 119
+ P+ T+ ++ FC++ + A V+M G P ++LI ++R EA
Sbjct: 491 GVKPNVVTYTTMMSGFCRKGLKEEADALFVEMKEDGPLPNSGTYNTLI--RARLRDGDEA 548
Query: 120 LS 121
S
Sbjct: 549 AS 550
Score = 40.8 bits (94), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 37/154 (24%), Positives = 66/154 (42%), Gaps = 15/154 (9%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+IS C G + + +L D K D+V N+++ A+ + G + + + DE+
Sbjct: 291 LISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKL---VEAEKLYDEMV 347
Query: 61 IS----PDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAH 116
S PD ++ LIK FCK K +M ++G ++LI + R
Sbjct: 348 KSKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDC 407
Query: 117 SEALSVYNMLRYSKRSMCKALHEKIL--HILISG 148
A V+ K+ + +H I+ +IL+ G
Sbjct: 408 DNAQMVF------KQMVSDGVHPDIMTYNILLDG 435
Score = 37.4 bits (85), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 26/116 (22%), Positives = 50/116 (43%)
Query: 11 FEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHI 70
++ L GD +V + +L A + + V+ + ++ L IS + T+ I
Sbjct: 56 LDDAIGLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSI 115
Query: 71 LIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVYNML 126
I YFC+ LA + M + G+ P +SL+ SEA+++ + +
Sbjct: 116 FINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQM 171
>gi|222628656|gb|EEE60788.1| hypothetical protein OsJ_14372 [Oryza sativa Japonica Group]
Length = 748
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/107 (19%), Positives = 48/107 (44%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ CR+ C +E L A K+D++ N ++ A + G + + +
Sbjct: 584 VLGGLCRNNCTDEANMLLEKLFAMNVKFDIITFNIVISAMLKVGRRQEAKELFAAISTYG 643
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLI 107
+ P +T++++I KE+ Y A + + + G P+ L + ++
Sbjct: 644 LVPTVHTYNLMISNLIKEESYEEADNLFISVEKSGRAPDSRLLNHIV 690
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 30/126 (23%), Positives = 58/126 (46%)
Query: 29 DVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYMLAYRTM 88
DV N+++ + + G+++ + K+ E ++SPD T++ LI CK K + + R +
Sbjct: 156 DVCSYNTLIDGFSKEGEVDKAYELFYKMIEQSVSPDVVTYNSLIDGLCKTKEMVKSERVL 215
Query: 89 VDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVYNMLRYSKRSMCKALHEKILHILISG 148
M G +P + +SLI+ E++ V+ + S C +H L
Sbjct: 216 EQMVDAGIRPNNKTYNSLIYGYSTAGMWKESVRVFKEMSSSGLIPCVVNCNSFIHALCRH 275
Query: 149 KLLKDA 154
+K+A
Sbjct: 276 NRIKEA 281
Score = 43.5 bits (101), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 28/119 (23%), Positives = 51/119 (42%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ + G E K + + +VV NS++ YC G+ME ++ + +
Sbjct: 444 IINNLFKEGRVAEGKDIMDLMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMASIG 503
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEA 119
I P+ + L+ +CK A DM KG +P L + ++ L + R + A
Sbjct: 504 IEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYNIILHGLFQARRTTAA 562
Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 29/124 (23%), Positives = 55/124 (44%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I F + G ++ +L + DVV NS++ C+T +M V+ ++ +
Sbjct: 163 LIDGFSKEGEVDKAYELFYKMIEQSVSPDVVTYNSLIDGLCKTKEMVKSERVLEQMVDAG 222
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
I P+ T++ LI + M+ + R +M G P C+S I L + EA
Sbjct: 223 IRPNNKTYNSLIYGYSTAGMWKESVRVFKEMSSSGLIPCVVNCNSFIHALCRHNRIKEAK 282
Query: 121 SVYN 124
+++
Sbjct: 283 DIFD 286
Score = 39.3 bits (90), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 29/123 (23%), Positives = 55/123 (44%)
Query: 2 ISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAI 61
I A CR +E K + K K +++ +++L Y G ++ ++ + I
Sbjct: 269 IHALCRHNRIKEAKDIFDSMVLKGPKPNIISYSTLLHGYAAEGCFANMNSLVNLMVSKGI 328
Query: 62 SPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEALS 121
P++ F+ILI + + M A DM KG P+ +++I L ++ +AL
Sbjct: 329 VPNHRFFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCRIGRLDDALH 388
Query: 122 VYN 124
+N
Sbjct: 389 KFN 391
>gi|116309903|emb|CAH66938.1| OSIGBa0116M22.5 [Oryza sativa Indica Group]
Length = 568
Score = 46.6 bits (109), Expect = 0.003, Method: Composition-based stats.
Identities = 35/150 (23%), Positives = 75/150 (50%), Gaps = 8/150 (5%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I A + G +ET +L + + + D+VL N+++ ++ +G+++ +M ++++
Sbjct: 368 LIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKR 427
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
I+PD T++ L++ C A + + +M ++G QP+ ++LI +S
Sbjct: 428 IAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTKRGIQPDLVTYNTLI------SGYSMKG 481
Query: 121 SVYNMLRYSKRSMCKALHEKIL--HILISG 148
V + LR M K + +L + LI G
Sbjct: 482 DVKDALRIRNEMMNKGFNPTLLTYNALIQG 511
Score = 39.7 bits (91), Expect = 0.40, Method: Composition-based stats.
Identities = 23/107 (21%), Positives = 49/107 (45%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ C G +E ++L + + + D+V N+++ Y GD++ + + ++
Sbjct: 438 LMRGLCLLGRVDEARKLIDEMTKRGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKG 497
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLI 107
+P T++ LI+ CK A + +M G P++ SLI
Sbjct: 498 FNPTLLTYNALIQGLCKNGQGDDAENMVKEMVENGITPDDSTYISLI 544
Score = 38.1 bits (87), Expect = 1.3, Method: Composition-based stats.
Identities = 27/112 (24%), Positives = 51/112 (45%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I++ SG + ++ G+ E K D V N+++ C G ++ ++ ++ +
Sbjct: 403 LINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTKRG 462
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGK 112
I PD T++ LI + + A R +M KG P ++LI L K
Sbjct: 463 IQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCK 514
Score = 36.6 bits (83), Expect = 3.2, Method: Composition-based stats.
Identities = 21/81 (25%), Positives = 44/81 (54%), Gaps = 2/81 (2%)
Query: 29 DVVLLNSMLCAYCRTGDMESVMHVMRKLDEL-AISPDYNTFHILIKYFCKEKMYMLAYRT 87
+ V N+++ +C G +++ + +MR++ E I+P+ T+ +I +CK A +
Sbjct: 184 NAVTYNTVIAGFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKV 243
Query: 88 MVDMHRKGH-QPEEELCSSLI 107
+M KG +PE + ++LI
Sbjct: 244 FDEMLTKGEVKPEAVMYNALI 264
>gi|255660860|gb|ACU25599.1| pentatricopeptide repeat-containing protein [Petrea racemosa]
Length = 418
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/107 (24%), Positives = 52/107 (48%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ C+ +E L G+ + V +++ +C+ G ++ M + R++
Sbjct: 212 LINGLCKESRMDEANGLFGEMLDNGLVPNGVTFTTLIDGHCKNGRLDLAMDIYRQMLNQG 271
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLI 107
SPD T++ LI CK+ A + +M RKG +P++ ++LI
Sbjct: 272 FSPDVVTYNTLIYGLCKKGDLKQARYLLDEMSRKGLKPDKITYTTLI 318
Score = 41.6 bits (96), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 23/101 (22%), Positives = 50/101 (49%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C+ G ++ + L + K K D + +++ C+ GD+E+ + ++ + +
Sbjct: 282 LIYGLCKKGDLKQARYLLDEMSRKGLKPDKITYTTLIDGSCKEGDLETAFELRERMIKES 341
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEE 101
I D + LI C+E + A + + +M R G +P++E
Sbjct: 342 IRLDDVVYTALIFGLCQEGRAVDAEKMLREMLRVGLKPDDE 382
Score = 40.4 bits (93), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 25/99 (25%), Positives = 49/99 (49%), Gaps = 3/99 (3%)
Query: 29 DVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYMLAYRTM 88
DVV N+++ C+ GD++ +++ ++ + PD T+ LI CKE A+
Sbjct: 275 DVVTYNTLIYGLCKKGDLKQARYLLDEMSRKGLKPDKITYTTLIDGSCKEGDLETAFELR 334
Query: 89 VDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVYNMLR 127
M ++ + ++ + ++LIF L + A+ MLR
Sbjct: 335 ERMIKESIRLDDVVYTALIFGLCQ---EGRAVDAEKMLR 370
Score = 37.0 bits (84), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 27/106 (25%), Positives = 46/106 (43%), Gaps = 6/106 (5%)
Query: 5 FCRSGCFEETKQLAGDFEA--KYD-KYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAI 61
FC+ G E + F+A K+ + VV N+++ Y + GD++ + + +
Sbjct: 146 FCKEG---EMRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDLDEGFRLKNAMRASGV 202
Query: 62 SPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLI 107
PD T+ +LI CKE A +M G P ++LI
Sbjct: 203 QPDVYTYSVLINGLCKESRMDEANGLFGEMLDNGLVPNGVTFTTLI 248
>gi|356554658|ref|XP_003545661.1| PREDICTED: pentatricopeptide repeat-containing protein At1g22960,
mitochondrial-like [Glycine max]
Length = 675
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/99 (27%), Positives = 46/99 (46%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I + R G E L + + VV N+++ CR GD++ M + ++ +
Sbjct: 336 LIYGYTRLGNIGEAFLLFAELRFRGLVPSVVTYNTLIDGLCRMGDLDVAMRLKDEMIKHG 395
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPE 99
PD TF IL++ FCK +A +M +G QP+
Sbjct: 396 PDPDVFTFTILVRGFCKLGNLPMAKELFDEMLNRGLQPD 434
Score = 38.1 bits (87), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 23/84 (27%), Positives = 39/84 (46%)
Query: 29 DVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYMLAYRTM 88
+V+ N+++ C+ M+ ++ ISP+ T+ ILI C + A R
Sbjct: 574 NVITYNALINGLCKVRKMDQAYKFFTEMQAKGISPNKYTYTILINENCNLGHWQEALRLY 633
Query: 89 VDMHRKGHQPEEELCSSLIFHLGK 112
DM + QP+ S+L+ HL K
Sbjct: 634 KDMLDREIQPDSCTHSALLKHLNK 657
>gi|242044666|ref|XP_002460204.1| hypothetical protein SORBIDRAFT_02g024500 [Sorghum bicolor]
gi|241923581|gb|EER96725.1| hypothetical protein SORBIDRAFT_02g024500 [Sorghum bicolor]
Length = 637
Score = 46.6 bits (109), Expect = 0.003, Method: Composition-based stats.
Identities = 32/123 (26%), Positives = 54/123 (43%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
MI C GC + ++L + + + N ++ +C+ D+ S + ++L
Sbjct: 219 MICVLCEEGCIGDAERLFDAMKEAGMRPNQYTYNVLMSGHCQGDDVNSAFVLYQELLNSG 278
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ P+ F LI FCK K + A DM R G P + +SL+ + EAL
Sbjct: 279 LIPNAVVFTTLIDGFCKAKRFSEAKDMFRDMPRFGVAPTVPVYNSLMDGAFRSGDAQEAL 338
Query: 121 SVY 123
S+Y
Sbjct: 339 SLY 341
Score = 39.3 bits (90), Expect = 0.62, Method: Composition-based stats.
Identities = 22/95 (23%), Positives = 43/95 (45%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I FC++ F E K + D V + NS++ R+GD + + + +++ L
Sbjct: 289 LIDGFCKAKRFSEAKDMFRDMPRFGVAPTVPVYNSLMDGAFRSGDAQEALSLYQEMTRLG 348
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKG 95
+ PD T I+++ C +A R + + G
Sbjct: 349 LCPDEFTCSIVVRGLCDGGQIQVAARFLEGVREDG 383
Score = 36.2 bits (82), Expect = 5.2, Method: Composition-based stats.
Identities = 18/74 (24%), Positives = 36/74 (48%)
Query: 34 NSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHR 93
N+++ YCR G++E + ++ E+ + P+ ++ LI K +A +M
Sbjct: 392 NALIDEYCRNGNLEEALATCTRMTEVGVEPNVVSYSSLIDGHSKLGKMQIAMAIYTEMVA 451
Query: 94 KGHQPEEELCSSLI 107
KG +P ++LI
Sbjct: 452 KGIEPNVVTYTALI 465
>gi|302780865|ref|XP_002972207.1| hypothetical protein SELMODRAFT_17157 [Selaginella moellendorffii]
gi|300160506|gb|EFJ27124.1| hypothetical protein SELMODRAFT_17157 [Selaginella moellendorffii]
Length = 168
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 32/129 (24%), Positives = 59/129 (45%), Gaps = 2/129 (1%)
Query: 4 AFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISP 63
C++G E +L GD +AK+ DV++ + ++ +C+ ++ + + AI P
Sbjct: 1 GLCKTGRVPEANRLFGDMKAKFCNLDVIMYSCLIGGFCKLERIDMACMLFDDTLKQAILP 60
Query: 64 DYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVY 123
D TF L++ +C + A R + +M P+ +SL+ K+ EA V
Sbjct: 61 DVVTFSTLVEGYCNAGLVDDAERLLEEMVASDCSPDVYTYTSLVDGFCKVGRMVEACRVL 120
Query: 124 NMLRYSKRS 132
R +KR
Sbjct: 121 K--RMAKRG 127
Score = 40.0 bits (92), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 20/71 (28%), Positives = 36/71 (50%)
Query: 29 DVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYMLAYRTM 88
DVV ++++ YC G ++ ++ ++ SPD T+ L+ FCK + A R +
Sbjct: 61 DVVTFSTLVEGYCNAGLVDDAERLLEEMVASDCSPDVYTYTSLVDGFCKVGRMVEACRVL 120
Query: 89 VDMHRKGHQPE 99
M ++G QP
Sbjct: 121 KRMAKRGCQPN 131
>gi|110742004|dbj|BAE98941.1| putative salt-inducible protein [Arabidopsis thaliana]
Length = 497
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/113 (26%), Positives = 55/113 (48%), Gaps = 13/113 (11%)
Query: 2 ISAFCRSG-------CFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMR 54
I A+CR+ F+ K+L K +V + N+++ Y ++GDM+ + +
Sbjct: 164 IDAYCRARKMDYALLAFDTMKRLIDG------KPNVGVYNTVVNGYVKSGDMDKALRFYQ 217
Query: 55 KLDELAISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLI 107
++ + PD TF+ILI +C+ + LA +M KG +P ++LI
Sbjct: 218 RMGKERAKPDVCTFNILINGYCRSSKFDLALDLFREMKEKGCEPNVVSFNTLI 270
Score = 35.0 bits (79), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 16/75 (21%), Positives = 37/75 (49%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+++ + +SG ++ + + K DV N ++ YCR+ + + + R++ E
Sbjct: 199 VVNGYVKSGDMDKALRFYQRMGKERAKPDVCTFNILINGYCRSSKFDLALDLFREMKEKG 258
Query: 61 ISPDYNTFHILIKYF 75
P+ +F+ LI+ F
Sbjct: 259 CEPNVVSFNTLIRGF 273
>gi|79568177|ref|NP_181166.3| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75206301|sp|Q9SJN2.1|PP187_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g36240
gi|4510352|gb|AAD21441.1| putative salt-inducible protein [Arabidopsis thaliana]
gi|330254126|gb|AEC09220.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 497
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/113 (26%), Positives = 55/113 (48%), Gaps = 13/113 (11%)
Query: 2 ISAFCRSG-------CFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMR 54
I A+CR+ F+ K+L K +V + N+++ Y ++GDM+ + +
Sbjct: 164 IDAYCRARKMDYALLAFDTMKRLIDG------KPNVGVYNTVVNGYVKSGDMDKALRFYQ 217
Query: 55 KLDELAISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLI 107
++ + PD TF+ILI +C+ + LA +M KG +P ++LI
Sbjct: 218 RMGKERAKPDVCTFNILINGYCRSSKFDLALDLFREMKEKGCEPNVVSFNTLI 270
Score = 35.0 bits (79), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 16/75 (21%), Positives = 37/75 (49%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+++ + +SG ++ + + K DV N ++ YCR+ + + + R++ E
Sbjct: 199 VVNGYVKSGDMDKALRFYQRMGKERAKPDVCTFNILINGYCRSSKFDLALDLFREMKEKG 258
Query: 61 ISPDYNTFHILIKYF 75
P+ +F+ LI+ F
Sbjct: 259 CEPNVVSFNTLIRGF 273
>gi|115447573|ref|NP_001047566.1| Os02g0644600 [Oryza sativa Japonica Group]
gi|49387609|dbj|BAD25805.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|49388661|dbj|BAD25796.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|113537097|dbj|BAF09480.1| Os02g0644600 [Oryza sativa Japonica Group]
Length = 526
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/126 (22%), Positives = 55/126 (43%)
Query: 2 ISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAI 61
+ +C++G E +L + + D + ++ YC G+M++ V ++ + I
Sbjct: 112 MDTYCKNGNMNEAVKLLNEMKCGGLTPDKIHYTCLINGYCLKGEMQNAQQVFEEMLKANI 171
Query: 62 SPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEALS 121
PD T++IL FCK + M + + M G +P I + SEA
Sbjct: 172 EPDIVTYNILASGFCKSGLVMEVFDLLDRMADHGLEPNSLTYGIAIVGFCRGGNLSEAEV 231
Query: 122 VYNMLR 127
++N++
Sbjct: 232 LFNVVE 237
Score = 36.6 bits (83), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 17/80 (21%), Positives = 38/80 (47%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+IS +C++G ++ D + DV++ ++ YC+ G ++ + ++ L
Sbjct: 321 LISIYCQNGDMDKAHLWFHDMVQRGLSIDVIVYTILMNGYCKAGRLQEACQLFVQMTNLG 380
Query: 61 ISPDYNTFHILIKYFCKEKM 80
I PD + +L+ KE +
Sbjct: 381 IKPDVIAYTVLLDGHLKETL 400
Score = 35.4 bits (80), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 16/77 (20%), Positives = 39/77 (50%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ +C G + +Q+ + + D+V N + +C++G + V ++ ++ +
Sbjct: 146 LINGYCLKGEMQNAQQVFEEMLKANIEPDIVTYNILASGFCKSGLVMEVFDLLDRMADHG 205
Query: 61 ISPDYNTFHILIKYFCK 77
+ P+ T+ I I FC+
Sbjct: 206 LEPNSLTYGIAIVGFCR 222
>gi|414882131|tpg|DAA59262.1| TPA: hypothetical protein ZEAMMB73_845952 [Zea mays]
Length = 1604
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 40/159 (25%), Positives = 70/159 (44%), Gaps = 10/159 (6%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+++ +C++G +E L GD V+ N ++ YCR GD+E + ++ E
Sbjct: 1266 LLNGYCKAGNLKEALLLFGDLRRAGLAPTVLTYNILIDGYCRLGDLEEARILKEEMGEQG 1325
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPE-----EELCSSLIFHLGKMRA 115
P+ T+ IL+K + +A +M KG QP+ +C+ LI LG +
Sbjct: 1326 CLPNVCTYTILMKGSLNVRSLAMAREFFDEMLSKGLQPDCFAYNTRICAELI--LGDI-- 1381
Query: 116 HSEALSVYNMLRYSKRSMCKALHEKILHILISGKLLKDA 154
+ A + +L S + ++H L LKDA
Sbjct: 1382 -ARAFELREVLMLEGISSDTVTYNILIHGLCKTGNLKDA 1419
Score = 43.9 bits (102), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 38/155 (24%), Positives = 67/155 (43%), Gaps = 5/155 (3%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
MI +SG E + + A DV+ NS+L YC+ G+++ + + L
Sbjct: 1231 MIHGLLQSGLVEAAQVKFAEMRAMGLLPDVITYNSLLNGYCKAGNLKEALLLFGDLRRAG 1290
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
++P T++ILI +C+ A +M +G P +C+ I G + S A+
Sbjct: 1291 LAPTVLTYNILIDGYCRLGDLEEARILKEEMGEQGCLP--NVCTYTILMKGSLNVRSLAM 1348
Query: 121 S---VYNMLRYSKRSMCKALHEKILHILISGKLLK 152
+ ML + C A + +I LI G + +
Sbjct: 1349 AREFFDEMLSKGLQPDCFAYNTRICAELILGDIAR 1383
>gi|302762392|ref|XP_002964618.1| hypothetical protein SELMODRAFT_61490 [Selaginella moellendorffii]
gi|300168347|gb|EFJ34951.1| hypothetical protein SELMODRAFT_61490 [Selaginella moellendorffii]
Length = 523
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/131 (23%), Positives = 61/131 (46%)
Query: 29 DVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYMLAYRTM 88
D V M+ +CR G+++ + + ++ + SPD TF LI FCK + A +
Sbjct: 211 DTVTYTRMIDGFCRRGELDKALVIYSRMKDSESSPDVVTFGCLINGFCKALKFDEAIIIL 270
Query: 89 VDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVYNMLRYSKRSMCKALHEKILHILISG 148
G +P+E SS+I L + AL V+ + R L+ ++++ L
Sbjct: 271 KASLDAGLEPDEITYSSIIDPLCNLELWDIALVVFELARQRNCPGSIYLYSRLMNCLCKA 330
Query: 149 KLLKDAYIVVK 159
+++A ++++
Sbjct: 331 GKIEEAVLLLE 341
Score = 40.4 bits (93), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 37/142 (26%), Positives = 57/142 (40%), Gaps = 16/142 (11%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I AFC+ EE Q+A E + DVV S L A C G ++ ++ +
Sbjct: 369 VIDAFCQENRIEEALQMAKAMEEQGIGADVVTYTSFLRALCNVGMVDEACKLLEMMATSG 428
Query: 61 IS-PDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEE--------ELCSS------ 105
S PD + L+ FC A + M G +P++ LC+S
Sbjct: 429 SSFPDVIACNALVGAFCSAARVEEACNLLRAMLEHGIEPDDLTYTQVIGALCASKRMEAA 488
Query: 106 -LIFHLGKMRAHSEALSVYNML 126
L+F K+ H+ L+ Y L
Sbjct: 489 MLLFEYMKVANHTPKLTTYKEL 510
>gi|224107985|ref|XP_002314678.1| predicted protein [Populus trichocarpa]
gi|222863718|gb|EEF00849.1| predicted protein [Populus trichocarpa]
Length = 497
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/132 (23%), Positives = 61/132 (46%), Gaps = 6/132 (4%)
Query: 29 DVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYMLAYRTM 88
D N ++ YC+ +M ++++ PD ++ I +C++K +
Sbjct: 225 DSSSFNILIHGYCKARMFVVARKIMEEMEKHGFHPDVVSYSCFIAAYCEQKDFRNVEAVF 284
Query: 89 VDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVYNMLRYSKRSMC---KALHEKILHIL 145
+M KG +P ++++ LGK R +EAL VY + KR+ C + ++++L
Sbjct: 285 DEMQEKGCKPNVITYTTVMHALGKARQLNEALEVYEKM---KRNGCLPDSKFYSSLIYVL 341
Query: 146 ISGKLLKDAYIV 157
+KDA+ V
Sbjct: 342 SQSGRIKDAWDV 353
Score = 43.5 bits (101), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 32/137 (23%), Positives = 60/137 (43%), Gaps = 2/137 (1%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I +C++ F +++ + E DVV + + AYC D +V V ++ E
Sbjct: 232 LIHGYCKARMFVVARKIMEEMEKHGFHPDVVSYSCFIAAYCEQKDFRNVEAVFDEMQEKG 291
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
P+ T+ ++ K + A M R G P+ + SSLI+ L + +A
Sbjct: 292 CKPNVITYTTVMHALGKARQLNEALEVYEKMKRNGCLPDSKFYSSLIYVLSQSGRIKDAW 351
Query: 121 SVYNMLRYSKRSMCKAL 137
V+ + K+ +C+ L
Sbjct: 352 DVFEDME--KQGVCRNL 366
>gi|224115776|ref|XP_002332054.1| predicted protein [Populus trichocarpa]
gi|222831940|gb|EEE70417.1| predicted protein [Populus trichocarpa]
Length = 444
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 35/155 (22%), Positives = 70/155 (45%), Gaps = 2/155 (1%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRT-GDMESVMHVMRKLDEL 59
+++ C++G EE ++ K+ +V N +L +C D+ + R++ +
Sbjct: 131 LLNVLCKNGNIEEAEEFML-VNKKFFPLEVEGFNIILNGWCNICVDVFEAKRIWREMSKY 189
Query: 60 AISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEA 119
I PD T+ +I F K + R M ++G P E+ +SL++ L + EA
Sbjct: 190 CIDPDATTYTHMISCFSKVGNLFDSLRLYDGMKKRGWVPGIEVYNSLVYILTRENCFKEA 249
Query: 120 LSVYNMLRYSKRSMCKALHEKILHILISGKLLKDA 154
L + + ++ + A + ++ L K L+DA
Sbjct: 250 LKILDKMKETGLQRDSATYNSMIRPLCEAKKLEDA 284
>gi|357122825|ref|XP_003563115.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g11690-like [Brachypodium distachyon]
Length = 410
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/107 (25%), Positives = 48/107 (44%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ +CR+G FE + L + AK +VV N+++ CR M+ ++ +
Sbjct: 114 LVGEWCRTGEFERARLLFEEMPAKGITRNVVSYNTLIAGLCRYRKMKDATQLLELMRREG 173
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLI 107
I P TF++L+ + K A M G+QP ++LI
Sbjct: 174 IRPSVVTFNLLVDGYGKAGKMSNALHFSNQMRMAGYQPSAVTYNALI 220
Score = 37.4 bits (85), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 23/94 (24%), Positives = 44/94 (46%)
Query: 34 NSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHR 93
N ++ +CRTG+ E + ++ I+ + +++ LI C+ + A + + M R
Sbjct: 112 NILVGEWCRTGEFERARLLFEEMPAKGITRNVVSYNTLIAGLCRYRKMKDATQLLELMRR 171
Query: 94 KGHQPEEELCSSLIFHLGKMRAHSEALSVYNMLR 127
+G +P + L+ GK S AL N +R
Sbjct: 172 EGIRPSVVTFNLLVDGYGKAGKMSNALHFSNQMR 205
>gi|356503775|ref|XP_003520679.1| PREDICTED: pentatricopeptide repeat-containing protein At5g12100,
mitochondrial-like [Glycine max]
Length = 777
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/112 (24%), Positives = 52/112 (46%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+++ CR G E+ +++ + N ++ AYC+ GD++ + +++E
Sbjct: 331 LLNGLCRVGRIEKAEEVLAKLVENGVTPSKISYNILVNAYCQEGDVKKAILTTEQMEERG 390
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGK 112
+ P+ TF+ +I FC+ A + M KG P E +SLI G+
Sbjct: 391 LEPNRITFNTVISKFCETGEVDHAETWVRRMVEKGVSPTVETYNSLINGYGQ 442
Score = 44.3 bits (103), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 30/112 (26%), Positives = 50/112 (44%), Gaps = 7/112 (6%)
Query: 3 SAFCRSG----CFEETKQLAGD---FEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRK 55
S F G F++ AGD F+ K + D +L CR G +E V+ K
Sbjct: 291 SGFLPGGFLSFVFDDHSNGAGDDGLFDGKEIRIDERTYCILLNGLCRVGRIEKAEEVLAK 350
Query: 56 LDELAISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLI 107
L E ++P +++IL+ +C+E A T M +G +P +++I
Sbjct: 351 LVENGVTPSKISYNILVNAYCQEGDVKKAILTTEQMEERGLEPNRITFNTVI 402
Score = 43.5 bits (101), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 24/114 (21%), Positives = 58/114 (50%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+++A+C+ G ++ E + + + + N+++ +C TG+++ +R++ E
Sbjct: 366 LVNAYCQEGDVKKAILTTEQMEERGLEPNRITFNTVISKFCETGEVDHAETWVRRMVEKG 425
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMR 114
+SP T++ LI + ++ ++ + + +M + G +P SLI L K R
Sbjct: 426 VSPTVETYNSLINGYGQKGHFVRCFEFLDEMDKAGIKPNVISYGSLINCLCKDR 479
Score = 38.9 bits (89), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 24/108 (22%), Positives = 53/108 (49%), Gaps = 1/108 (0%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ R+G ++ + L K DV+ NS++ Y ++ + + + + K+ L
Sbjct: 541 LINGLGRNGRVKKAEDLFLQMAGKGCNPDVITYNSLISGYAKSVNTQKCLELYDKMKILG 600
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIF 108
I P TFH LI Y C+++ + + +M + P++ + + +I+
Sbjct: 601 IKPTVGTFHPLI-YACRKEGVVTMDKMFQEMLQMDLVPDQFVYNEMIY 647
Score = 38.1 bits (87), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 39/82 (47%)
Query: 29 DVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYMLAYRTM 88
D V NS++ AY R + + H++ + + P +T++ILIK C K + AY
Sbjct: 673 DKVTYNSLILAYLRDRRVSEIKHLVDDMKAKGLVPKVDTYNILIKGLCDLKDFNGAYFWY 732
Query: 89 VDMHRKGHQPEEELCSSLIFHL 110
+M +G +C LI L
Sbjct: 733 REMVERGLLLNVSMCYQLISGL 754
>gi|15240937|ref|NP_198098.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|122214236|sp|Q3E911.1|PP400_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g27460
gi|332006308|gb|AED93691.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 491
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/125 (24%), Positives = 62/125 (49%), Gaps = 4/125 (3%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++S+ ++G EE +++ ++EA+ YDV + N +L AY R G++ + + E
Sbjct: 325 VLSSLVKTGDLEEAERVFSEWEAQCFNYDVRVSNVLLGAYVRNGEIRKAESLHGCVLERG 384
Query: 61 ISPDYNTFHILIKYFCK----EKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAH 116
+P+Y T+ IL++ + K EK ++ V M R +P + ++ + K
Sbjct: 385 GTPNYKTWEILMEGWVKCENMEKAIDAMHQVFVLMRRCHWRPSHNIVMAIAEYFEKEEKI 444
Query: 117 SEALS 121
EA +
Sbjct: 445 EEATA 449
>gi|15219049|ref|NP_175673.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75207559|sp|Q9SSR6.1|PPR78_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g52640, mitochondrial; Flags: Precursor
gi|5903042|gb|AAD55601.1|AC008016_11 Contains 2 PF|01535 DUF domains [Arabidopsis thaliana]
gi|45773940|gb|AAS76774.1| At1g52640 [Arabidopsis thaliana]
gi|62320530|dbj|BAD95108.1| hypothetical protein [Arabidopsis thaliana]
gi|332194712|gb|AEE32833.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 523
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/110 (27%), Positives = 54/110 (49%), Gaps = 6/110 (5%)
Query: 1 MISAFCRSGCFE---ETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLD 57
++ A C+SG + + Q G+ K D Y + + AYC GD+ S V+ ++
Sbjct: 249 LLDALCKSGDVDGGYKMFQEMGNLGLKPDAYSFAIF---IHAYCDAGDVHSAYKVLDRMK 305
Query: 58 ELAISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLI 107
+ P+ TF+ +IK CK + AY + +M +KG P+ +S++
Sbjct: 306 RYDLVPNVYTFNHIIKTLCKNEKVDDAYLLLDEMIQKGANPDTWTYNSIM 355
Score = 38.9 bits (89), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 18/65 (27%), Positives = 35/65 (53%)
Query: 29 DVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYMLAYRTM 88
D++ N++L A C++GD++ + +++ L + PD +F I I +C AY+ +
Sbjct: 242 DLLAYNALLDALCKSGDVDGGYKMFQEMGNLGLKPDAYSFAIFIHAYCDAGDVHSAYKVL 301
Query: 89 VDMHR 93
M R
Sbjct: 302 DRMKR 306
>gi|357130032|ref|XP_003566662.1| PREDICTED: protein Rf1, mitochondrial-like [Brachypodium
distachyon]
Length = 859
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/127 (24%), Positives = 60/127 (47%), Gaps = 1/127 (0%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+ISA + G +E + + + + + DVV ++++ A+CR G + M ++ +
Sbjct: 445 LISAHAKRGMMDEAMLVFTEMQGQGVRPDVVTYSTLISAFCRMGRLADAMEKFSQMISIG 504
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKG-HQPEEELCSSLIFHLGKMRAHSEA 119
+ P+ +H LI FC + A + +M KG +P SS+I L +A
Sbjct: 505 LEPNTVVYHSLIHGFCMHGDLVKAKELVSEMMSKGIPRPNIVFFSSIIHSLCNEGRVMDA 564
Query: 120 LSVYNML 126
V+N++
Sbjct: 565 HDVFNLV 571
Score = 44.3 bits (103), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 24/93 (25%), Positives = 42/93 (45%), Gaps = 3/93 (3%)
Query: 26 DKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMY---M 82
D+ +V NS++ YC G ME V+ + + I PD T++ L+ +CK +
Sbjct: 576 DRPTIVTFNSLIDGYCLVGKMEKAFGVLDAMVSVGIEPDVVTYNTLVSGYCKSGKIDDGL 635
Query: 83 LAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRA 115
+ +R M+ K + +FH G+ A
Sbjct: 636 ILFREMLHKKVKPTTVTYSIVLDGLFHAGRTSA 668
Score = 35.0 bits (79), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 22/107 (20%), Positives = 44/107 (41%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ CR+ +E L A K+D+ +LN+++ A + E + +
Sbjct: 691 LLKGLCRNDLTDEAITLFHKLGAMDCKFDITILNTVINALYKVRRREEANDLFAAISTSG 750
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLI 107
+ P+ +T+ ++I KE A M + G P L + +I
Sbjct: 751 LVPNVSTYGVMIHNLLKEGSVEEADTMFSSMEKSGCAPSSRLLNDII 797
>gi|302822936|ref|XP_002993123.1| hypothetical protein SELMODRAFT_136561 [Selaginella moellendorffii]
gi|300139014|gb|EFJ05763.1| hypothetical protein SELMODRAFT_136561 [Selaginella moellendorffii]
Length = 569
Score = 46.6 bits (109), Expect = 0.003, Method: Composition-based stats.
Identities = 24/98 (24%), Positives = 47/98 (47%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I +CR+G +E +L G DV+ +++ A+C+ G ++ + +++
Sbjct: 293 LIGGYCRAGDMDEAIRLLGKMVDDNCAPDVITYTTLMSAFCKMGRLDDAYELFQQMVANK 352
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQP 98
+SPD TF L+ C E A + ++ R+G P
Sbjct: 353 LSPDVVTFTSLVDGLCGEGRMEDALELLEEITRRGCPP 390
Score = 44.3 bits (103), Expect = 0.018, Method: Composition-based stats.
Identities = 23/98 (23%), Positives = 43/98 (43%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++SAFC+ G ++ +L A DVV S++ C G ME + ++ ++
Sbjct: 328 LMSAFCKMGRLDDAYELFQQMVANKLSPDVVTFTSLVDGLCGEGRMEDALELLEEITRRG 387
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQP 98
P T++ ++ +CK A + D +G P
Sbjct: 388 CPPTIYTYNCVVDGYCKSNQVRKAEELVADFRSRGFVP 425
Score = 43.1 bits (100), Expect = 0.040, Method: Composition-based stats.
Identities = 27/107 (25%), Positives = 47/107 (43%), Gaps = 3/107 (2%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C++G + + FE + NS++ YCR GDM+ + ++ K+ +
Sbjct: 261 VIDGLCKAGRLRDAVDI---FEEMSCAPTAITYNSLIGGYCRAGDMDEAIRLLGKMVDDN 317
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLI 107
+PD T+ L+ FCK AY M P+ +SL+
Sbjct: 318 CAPDVITYTTLMSAFCKMGRLDDAYELFQQMVANKLSPDVVTFTSLV 364
Score = 41.6 bits (96), Expect = 0.097, Method: Composition-based stats.
Identities = 38/137 (27%), Positives = 62/137 (45%), Gaps = 14/137 (10%)
Query: 29 DVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYMLAYRTM 88
D V LN++L C D + M + K+ EL + ++ T++ LI CK ++ A +
Sbjct: 45 DPVELNTILAELCDARDTTTAMALFDKMAELG-AVNHTTYYNLIHPLCKARLLDEAMGLL 103
Query: 89 VDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVYNMLRYSKRSMCKA------LHEKIL 142
+DM +G P L + +I L + AL VY R M A + K++
Sbjct: 104 LDMKSRGMNPGTLLHNVVIGGLCRAGRLRHALGVY-------RQMNDAHPPDFLTYTKLV 156
Query: 143 HILISGKLLKDAYIVVK 159
H L L+DA V++
Sbjct: 157 HGLSKAGRLRDAVQVLQ 173
Score = 35.4 bits (80), Expect = 7.8, Method: Composition-based stats.
Identities = 25/131 (19%), Positives = 60/131 (45%), Gaps = 3/131 (2%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLD-EL 59
++ +C+S + ++L DF ++ + V N ++ CR G + + + +L+ E
Sbjct: 398 VVDGYCKSNQVRKAEELVADFRSRGFVPNTVTYNILVAGCCRAGRTDQALQYLDQLNSEG 457
Query: 60 AISP-DYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSE 118
P + I++ C++ A + +M ++G+ P ++++F L K +
Sbjct: 458 GPCPTSVAMYAIILDALCRDGRTDDAVQFYEEMIQRGYVPAAATFATVVFALCKAHQPQQ 517
Query: 119 ALSVY-NMLRY 128
A + M++Y
Sbjct: 518 AHELLEEMIKY 528
>gi|357442909|ref|XP_003591732.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355480780|gb|AES61983.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 344
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/112 (25%), Positives = 51/112 (45%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ C+ G +E K + +VV S++ YC ++ HV R + +
Sbjct: 93 LVDGLCKEGKMKEAKSVIAMMMKDGVLPNVVTYTSIMEGYCLVNEVNKTKHVFRTISRMG 152
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGK 112
++P+ +++I+I FCK K+ A +M +G P SSLI L K
Sbjct: 153 VAPNTQSYNIMINGFCKIKIVNEALILFKEMCCRGIVPITVTYSSLIDGLCK 204
Score = 39.3 bits (90), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 23/99 (23%), Positives = 41/99 (41%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C+ + +L + A+ DV NS++ +C G ++ + ++
Sbjct: 23 IIDGLCKDKLVNDAYELYSEMIAEKISPDVATFNSLIYGFCIIGQLKDAFGLFSQMVLKN 82
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPE 99
I+P TF IL+ CKE A + M + G P
Sbjct: 83 INPSVYTFTILVDGLCKEGKMKEAKSVIAMMMKDGVLPN 121
>gi|297721877|ref|NP_001173302.1| Os03g0201300 [Oryza sativa Japonica Group]
gi|108706707|gb|ABF94502.1| salt-inducible protein, putative, expressed [Oryza sativa Japonica
Group]
gi|255674288|dbj|BAH92030.1| Os03g0201300 [Oryza sativa Japonica Group]
Length = 796
Score = 46.6 bits (109), Expect = 0.003, Method: Composition-based stats.
Identities = 28/119 (23%), Positives = 61/119 (51%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ A + C + +L + K K +V N ++ + C+ G +E + + K+ E
Sbjct: 355 LVDACFKWRCSSDALRLLEEMRDKGVKPTLVTHNIVVKSLCKEGKLEEALGKLEKIAEEG 414
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEA 119
++PD T++ LI +CK A+ M +M KG + + ++++++L KM+ + +A
Sbjct: 415 LAPDVITYNTLIDAYCKAGNVAKAFTLMDEMVGKGLKMDTFTLNTVLYNLCKMKRYEDA 473
Score = 40.4 bits (93), Expect = 0.24, Method: Composition-based stats.
Identities = 32/126 (25%), Positives = 52/126 (41%), Gaps = 3/126 (2%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I A+C+ G E + K DVV N+++ C G ++ + + E
Sbjct: 565 IIHAYCKEGDLENAFRFHNKMVENSFKPDVVTCNTLMNGLCLHGKLDKALKLFESWVEKG 624
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
D T++ LI+ CK A DM KG QP+ + ++ L + EA
Sbjct: 625 KKVDVITYNTLIQSMCKVGDVDTALHFFDDMEVKGLQPDAFTYNVVLSALSEAGRSEEA- 683
Query: 121 SVYNML 126
+NML
Sbjct: 684 --HNML 687
Score = 38.9 bits (89), Expect = 0.77, Method: Composition-based stats.
Identities = 19/74 (25%), Positives = 38/74 (51%)
Query: 34 NSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHR 93
N+++ CR ++ + + +L E + PD T++I+I +CKE A+R M
Sbjct: 528 NTLIKGLCRMERLKEAIDKLNELVEKGLVPDETTYNIIIHAYCKEGDLENAFRFHNKMVE 587
Query: 94 KGHQPEEELCSSLI 107
+P+ C++L+
Sbjct: 588 NSFKPDVVTCNTLM 601
Score = 37.7 bits (86), Expect = 1.6, Method: Composition-based stats.
Identities = 28/128 (21%), Positives = 54/128 (42%), Gaps = 1/128 (0%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+++A CR G E + L + N+++ A+ R G ++ V+ +
Sbjct: 249 LLNAHCRKGMLGEARALLARMKRDGIAPTQPTYNTLVSAFARLGWIKQATKVVESMTAYG 308
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQ-PEEELCSSLIFHLGKMRAHSEA 119
PD T+++L C+ A+R +M R P+ ++L+ K R S+A
Sbjct: 309 FEPDLRTYNVLAVGLCQAGKVDEAFRLKDEMERLSTALPDVVTYNTLVDACFKWRCSSDA 368
Query: 120 LSVYNMLR 127
L + +R
Sbjct: 369 LRLLEEMR 376
Score = 37.7 bits (86), Expect = 1.7, Method: Composition-based stats.
Identities = 22/100 (22%), Positives = 45/100 (45%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ + C+ G EE + DV+ N+++ AYC+ G++ +M ++
Sbjct: 390 VVKSLCKEGKLEEALGKLEKIAEEGLAPDVITYNTLIDAYCKAGNVAKAFTLMDEMVGKG 449
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEE 100
+ D T + ++ CK K Y A + ++G P+E
Sbjct: 450 LKMDTFTLNTVLYNLCKMKRYEDAEELLHSPPQRGFVPDE 489
>gi|326505340|dbj|BAK03057.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326511084|dbj|BAJ91889.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326518326|dbj|BAJ88192.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326518558|dbj|BAJ88308.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 556
Score = 46.6 bits (109), Expect = 0.003, Method: Composition-based stats.
Identities = 22/98 (22%), Positives = 48/98 (48%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ A C+ +++ +L + K D+V N ++ C+ G ++ M ++ L
Sbjct: 193 LLEATCKRSGYKQAVKLLDEMRDKGCAPDIVTYNVVVNGICQEGRVDDAMEFLKSLPSYG 252
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQP 98
P+ +++I++K C + + A + M +M RKG P
Sbjct: 253 CEPNTVSYNIVLKGLCTAERWEDAEKLMAEMSRKGRPP 290
Score = 43.5 bits (101), Expect = 0.031, Method: Composition-based stats.
Identities = 31/127 (24%), Positives = 58/127 (45%), Gaps = 8/127 (6%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C SG E +++ E DV+ N+M+ YC TG +++ R + +
Sbjct: 96 LIKKLCASGRTAEARRVLASCEP-----DVMSYNAMVAGYCVTGQLDN---ARRLVAAMP 147
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ PD T++ LI+ C A + DM R+G P+ + L+ K + +A+
Sbjct: 148 MEPDTYTYNTLIRGLCGRGRTDNALAVLDDMLRRGCVPDVVTYTILLEATCKRSGYKQAV 207
Query: 121 SVYNMLR 127
+ + +R
Sbjct: 208 KLLDEMR 214
Score = 42.7 bits (99), Expect = 0.053, Method: Composition-based stats.
Identities = 23/99 (23%), Positives = 46/99 (46%), Gaps = 3/99 (3%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
M++ +C +G + ++L + D Y N+++ C G ++ + V+ +
Sbjct: 126 MVAGYCVTGQLDNARRLVAAMPMEPDTYT---YNTLIRGLCGRGRTDNALAVLDDMLRRG 182
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPE 99
PD T+ IL++ CK Y A + + +M KG P+
Sbjct: 183 CVPDVVTYTILLEATCKRSGYKQAVKLLDEMRDKGCAPD 221
Score = 38.9 bits (89), Expect = 0.71, Method: Composition-based stats.
Identities = 30/148 (20%), Positives = 63/148 (42%), Gaps = 4/148 (2%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+++A CR G + +L + K ++ N+++ + G E + ++ ++
Sbjct: 368 LLTALCRGGEVDAAVELLHQLKDKGCTPVLISYNTVIDGLTKAGKTEEALELLNEMVTKG 427
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ PD T+ + C+E A + + G +P L ++++ L K RA A+
Sbjct: 428 LQPDIITYSTISSGLCREGRIEEAIKAFCKVQDMGIRPNTVLYNAILLGLCKRRATHSAI 487
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISG 148
++ Y + C +E ILI G
Sbjct: 488 DLFT---YMVSNGCMP-NESTYTILIEG 511
Score = 36.2 bits (82), Expect = 4.3, Method: Composition-based stats.
Identities = 18/71 (25%), Positives = 38/71 (53%)
Query: 29 DVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYMLAYRTM 88
D+V N++L A CR G++++ + ++ +L + +P +++ +I K A +
Sbjct: 361 DIVSYNTLLTALCRGGEVDAAVELLHQLKDKGCTPVLISYNTVIDGLTKAGKTEEALELL 420
Query: 89 VDMHRKGHQPE 99
+M KG QP+
Sbjct: 421 NEMVTKGLQPD 431
>gi|356551942|ref|XP_003544331.1| PREDICTED: pentatricopeptide repeat-containing protein At1g12300,
mitochondrial-like [Glycine max]
Length = 545
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/107 (22%), Positives = 51/107 (47%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ A C+ G +E + + DVV+ ++++ YC ++ + V + ++
Sbjct: 274 LVDALCKEGKVKEAENVLAVMVKACVNLDVVVYSTLMDGYCLVNEVNNAKRVFYTMTQMG 333
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLI 107
++PD + + I+I CK K A ++H+K P+ +SLI
Sbjct: 334 VTPDVHCYSIMINGLCKIKRVDEALNLFEEIHQKNMVPDTVTYTSLI 380
Score = 44.7 bits (104), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 31/122 (25%), Positives = 54/122 (44%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C+SG L + + DV+ N+++ A C+ G ++ + + K+ + A
Sbjct: 379 LIDCLCKSGRISYVWDLFDEMLDRGQPPDVITYNNLIDALCKNGHLDRAIALFNKMKDQA 438
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
I P+ TF IL+ CK A D+ KG+ + +I L K EAL
Sbjct: 439 IRPNVYTFTILLDGLCKVGRLKNALEFFQDLLTKGYCLNVRTYTVMINGLCKEGLLDEAL 498
Query: 121 SV 122
++
Sbjct: 499 AL 500
Score = 36.6 bits (83), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 19/78 (24%), Positives = 36/78 (46%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C+ +E L + K DVV + ++ +C G + + ++ ++
Sbjct: 204 IIDRLCKDTLVDEAYDLYTEMVGKGISPDVVTYSILVSGFCIVGQLNRAIDLLNEMVLEN 263
Query: 61 ISPDYNTFHILIKYFCKE 78
I+PD T+ IL+ CKE
Sbjct: 264 INPDIYTYTILVDALCKE 281
>gi|297806463|ref|XP_002871115.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297316952|gb|EFH47374.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 942
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 33/156 (21%), Positives = 72/156 (46%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ A C+SG + + + A+ + + N ++ + R GD+ +++++ +
Sbjct: 701 LLKACCKSGRMQSALAVTKEMSARNIPRNSFVYNILIDGWARRGDVWEAADLIQQMKKEG 760
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ PD +T+ I K A +T+ +M G +P + ++LI + +AL
Sbjct: 761 VKPDIHTYTSFISACSKAGDMNRATQTIEEMEALGVKPNIKTYTTLIKGWARASLPEKAL 820
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLKDAYI 156
S Y ++ KA++ +L L+S + +AYI
Sbjct: 821 SCYEEMKAVGLKPDKAVYHCLLTSLLSRASIAEAYI 856
Score = 43.1 bits (100), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 28/117 (23%), Positives = 55/117 (47%)
Query: 27 KYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYMLAYR 86
K DV+L N+++ A+C G+M+ + ++++ +L P TF +I F K +
Sbjct: 552 KPDVILYNNIIAAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMPIINGFAKSGDMRRSLE 611
Query: 87 TMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVYNMLRYSKRSMCKALHEKILH 143
M R G P ++LI L + R +A+ + + + + S + + KI+
Sbjct: 612 VFDMMRRCGCVPTVHTFNALINGLVEKRQMEKAVEILDEMTLAGVSANEHTYTKIMQ 668
>gi|226499896|ref|NP_001150085.1| EMB2745 [Zea mays]
gi|195636584|gb|ACG37760.1| EMB2745 [Zea mays]
gi|414879767|tpg|DAA56898.1| TPA: EMB2745 [Zea mays]
Length = 410
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/112 (23%), Positives = 49/112 (43%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ CR ++ QL + + +V N ++ Y + G M + +H ++
Sbjct: 149 LIAGLCRHSKLKDAVQLFEAMRREGIRPSIVTFNLLIDGYGKAGKMANALHFFNQMKAAG 208
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGK 112
+ P T++ LI FC+ + A R +DM +G P + + LI K
Sbjct: 209 LPPSVVTYNELICGFCRVRDIARAVRAFLDMKERGLAPTKVTYTILIAAFAK 260
Score = 40.0 bits (92), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 27/123 (21%), Positives = 51/123 (41%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I +CR+G F+ + L + K ++VV N ++ CR ++ + + +
Sbjct: 114 LIGEWCRTGEFKSARLLFDEMPVKGVVHNVVSYNILIAGLCRHSKLKDAVQLFEAMRREG 173
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
I P TF++LI + K A M G P + LI ++R + A+
Sbjct: 174 IRPSIVTFNLLIDGYGKAGKMANALHFFNQMKAAGLPPSVVTYNELICGFCRVRDIARAV 233
Query: 121 SVY 123
+
Sbjct: 234 RAF 236
Score = 36.6 bits (83), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 24/107 (22%), Positives = 47/107 (43%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ A C G ++L + K K + VL + M+ Y R G + ++ ++ +
Sbjct: 289 LLHALCMEGKMMHARKLFQSMDLKGVKPNSVLYDMMIYGYGREGSSYKALRLIMEMRKNG 348
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLI 107
+ P+ ++ + I+ C E A + DM G Q E +C L+
Sbjct: 349 LIPNVASYCLTIRLLCNEGKCQEAEALIDDMEHAGLQTSETICRILL 395
Score = 35.8 bits (81), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 22/96 (22%), Positives = 45/96 (46%)
Query: 34 NSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHR 93
N ++ +CRTG+ +S + ++ + + +++ILI C+ A + M R
Sbjct: 112 NCLIGEWCRTGEFKSARLLFDEMPVKGVVHNVVSYNILIAGLCRHSKLKDAVQLFEAMRR 171
Query: 94 KGHQPEEELCSSLIFHLGKMRAHSEALSVYNMLRYS 129
+G +P + LI GK + AL +N ++ +
Sbjct: 172 EGIRPSIVTFNLLIDGYGKAGKMANALHFFNQMKAA 207
>gi|422294671|gb|EKU21971.1| hypothetical protein NGA_2006000, partial [Nannochloropsis
gaditana CCMP526]
Length = 472
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 34/69 (49%)
Query: 27 KYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYMLAYR 86
K + + NS+L AY GDM V++++ + +SPD TF+ LI F + A +
Sbjct: 20 KPNAITYNSLLTAYTNAGDMAGAQQVLKRMVQAGLSPDTYTFNTLIAAFVARREVRAAEK 79
Query: 87 TMVDMHRKG 95
+ M G
Sbjct: 80 MVAYMQEHG 88
>gi|297838419|ref|XP_002887091.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297332932|gb|EFH63350.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 568
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/122 (20%), Positives = 56/122 (45%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I CR E ++ ++ +++ N+++ +C G + + + R L
Sbjct: 309 LIGGLCREMKANEANKVMDQMKSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRG 368
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+SP T++IL+ FCK+ A + + +M +G +P + + LI +M +A+
Sbjct: 369 LSPSLVTYNILVSGFCKKGDTSGAGKVVKEMEERGIKPSKITYTILIDTFARMDNMEKAI 428
Query: 121 SV 122
+
Sbjct: 429 QL 430
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 26/123 (21%), Positives = 58/123 (47%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++S FC+ G ++ + E + K + ++ + R +ME + + ++EL
Sbjct: 379 LVSGFCKKGDTSGAGKVVKEMEERGIKPSKITYTILIDTFARMDNMEKAIQLRSPMEELG 438
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
++PD +T+ +LI FC + A R M K +P + + ++++ K + AL
Sbjct: 439 LTPDVHTYSVLIHGFCIKGQMNEASRLFKLMVAKKLEPNKVIYNTMVLGYCKEGSSYRAL 498
Query: 121 SVY 123
++
Sbjct: 499 RLF 501
Score = 44.7 bits (104), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 25/102 (24%), Positives = 48/102 (47%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I FC G E +L AK + + V+ N+M+ YC+ G + + R+++E
Sbjct: 449 LIHGFCIKGQMNEASRLFKLMVAKKLEPNKVIYNTMVLGYCKEGSSYRALRLFREMEEKE 508
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEEL 102
+ P+ ++ +I+ CKE+ A + M G P + +
Sbjct: 509 LPPNVASYRYMIEVLCKERKSKEAEGLVEKMIDTGIDPSDSI 550
Score = 43.9 bits (102), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 27/107 (25%), Positives = 46/107 (42%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I FC G + L D +++ +V N ++ +C+ GD V+++++E
Sbjct: 344 LIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCKKGDTSGAGKVVKEMEERG 403
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLI 107
I P T+ ILI F + A + M G P+ S LI
Sbjct: 404 IKPSKITYTILIDTFARMDNMEKAIQLRSPMEELGLTPDVHTYSVLI 450
>gi|449513353|ref|XP_004164304.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At3g06920-like [Cucumis sativus]
Length = 904
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 33/155 (21%), Positives = 68/155 (43%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I F + G +E + + K +V N +L A + ++ + + + +L
Sbjct: 695 LIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEISEALVCFQSMKDLK 754
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+P+Y T+ ILI CK + + A+ +M ++G +P +++I L K EA
Sbjct: 755 CTPNYITYSILIHGLCKIRKFNKAFVFWQEMQKQGFKPNVFTYTTMISGLAKAGNIVEAD 814
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLKDAY 155
+++ + A++ I+ L + DAY
Sbjct: 815 TLFEKFKEKGGVADSAIYNAIIEGLSNANRASDAY 849
>gi|449432854|ref|XP_004134213.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g06920-like [Cucumis sativus]
Length = 904
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 33/155 (21%), Positives = 68/155 (43%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I F + G +E + + K +V N +L A + ++ + + + +L
Sbjct: 695 LIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEISEALVCFQSMKDLK 754
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+P+Y T+ ILI CK + + A+ +M ++G +P +++I L K EA
Sbjct: 755 CTPNYITYSILIHGLCKIRKFNKAFVFWQEMQKQGFKPNVFTYTTMISGLAKAGNIVEAD 814
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLKDAY 155
+++ + A++ I+ L + DAY
Sbjct: 815 TLFEKFKEKGGVADSAIYNAIIEGLSNANRASDAY 849
>gi|356523854|ref|XP_003530549.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g16890, mitochondrial-like [Glycine max]
Length = 678
Score = 46.6 bits (109), Expect = 0.004, Method: Composition-based stats.
Identities = 29/131 (22%), Positives = 64/131 (48%)
Query: 29 DVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYMLAYRTM 88
+ V+ N ++ + C GD+ + ++R++ + ISPD +++ LI+ FC+ A +
Sbjct: 533 NAVIYNILIRSLCTIGDVARSVKLLRRMQKEGISPDTYSYNALIQIFCRMNKVEKAKKLF 592
Query: 89 VDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVYNMLRYSKRSMCKALHEKILHILISG 148
M R G P+ S+ I L + EA ++ + + S + I+ IL+
Sbjct: 593 DSMSRSGLNPDNYTYSAFIEALSESGRLEEAKKMFYSMEANGCSPDSYICNLIIKILVQQ 652
Query: 149 KLLKDAYIVVK 159
+ +++A +++
Sbjct: 653 EYVEEAQNIIE 663
Score = 40.4 bits (93), Expect = 0.24, Method: Composition-based stats.
Identities = 24/110 (21%), Positives = 49/110 (44%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ FCR+ + + D + + ++V N+++ +C+ G ++ ++ L E
Sbjct: 435 IINCFCRAKLMDNASEAFRDMQVRGVVPNLVTFNTLINGHCKDGAIDKARKLLESLLENG 494
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHL 110
+ PD TF ++ C+ K A +M G P + + LI L
Sbjct: 495 LKPDIFTFSSIVDGLCQIKRTEEALECFTEMIEWGINPNAVIYNILIRSL 544
Score = 36.2 bits (82), Expect = 5.0, Method: Composition-based stats.
Identities = 22/95 (23%), Positives = 44/95 (46%)
Query: 29 DVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYMLAYRTM 88
+V N ++ +CR M++ R + + P+ TF+ LI CK+ A + +
Sbjct: 428 NVFSYNMIINCFCRAKLMDNASEAFRDMQVRGVVPNLVTFNTLINGHCKDGAIDKARKLL 487
Query: 89 VDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVY 123
+ G +P+ SS++ L +++ EAL +
Sbjct: 488 ESLLENGLKPDIFTFSSIVDGLCQIKRTEEALECF 522
>gi|255578729|ref|XP_002530223.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223530270|gb|EEF32170.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 517
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 39/158 (24%), Positives = 68/158 (43%), Gaps = 1/158 (0%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ AFC+SG E+ Q+ + E+ + N+++ YCR G + S + + +
Sbjct: 222 VMRAFCKSGKLEKAVQVFEEMESVGISPNDTSYNTLIMGYCRKGLLNSAVKLKNSMRAKG 281
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ + TF+ LI FCKE A + +M P ++LI +M
Sbjct: 282 VEANVVTFNSLIDGFCKEGKLHEASKVFSEMKVLNVAPNTITYNTLINGHSQMGNSEMGR 341
Query: 121 SVY-NMLRYSKRSMCKALHEKILHILISGKLLKDAYIV 157
+Y M R ++ + IL + GK K AY+V
Sbjct: 342 RLYEEMSRNGVKADILTYNALILGLCKEGKTKKAAYMV 379
Score = 42.4 bits (98), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 25/108 (23%), Positives = 54/108 (50%), Gaps = 3/108 (2%)
Query: 29 DVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYMLAYRTM 88
+V N ++ A+C++G +E + V +++ + ISP+ +++ LI +C++ + A +
Sbjct: 215 NVYTRNMVMRAFCKSGKLEKAVQVFEEMESVGISPNDTSYNTLIMGYCRKGLLNSAVKLK 274
Query: 89 VDMHRKGHQPEEELCSSLIFHL---GKMRAHSEALSVYNMLRYSKRSM 133
M KG + +SLI GK+ S+ S +L + ++
Sbjct: 275 NSMRAKGVEANVVTFNSLIDGFCKEGKLHEASKVFSEMKVLNVAPNTI 322
Score = 40.4 bits (93), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 24/107 (22%), Positives = 51/107 (47%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ + G E ++L + K D++ N+++ C+ G + +++++LD+
Sbjct: 327 LINGHSQMGNSEMGRRLYEEMSRNGVKADILTYNALILGLCKEGKTKKAAYMVKELDKEN 386
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLI 107
+ P+ +TF LI C A++ M R G P E+ + L+
Sbjct: 387 LVPNASTFSALISGQCIRNNSDRAFQLYKSMVRIGCHPNEQTFNMLV 433
>gi|356521277|ref|XP_003529283.1| PREDICTED: pentatricopeptide repeat-containing protein At1g55890,
mitochondrial-like [Glycine max]
Length = 379
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 35/143 (24%), Positives = 67/143 (46%), Gaps = 6/143 (4%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLD-EL 59
+IS + +SG + +++ + + V+ LN++L AY + + V + R L +L
Sbjct: 97 LISLYGKSGMTKHARKVFDEMPQRNCSRTVLSLNALLAAYLHSHKYDVVQELFRDLPTQL 156
Query: 60 AISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEA 119
+I PD T++ +IK FC++ + A + ++ KG P+ ++L+ L E
Sbjct: 157 SIKPDLVTYNTIIKAFCEKGSFDSALSVLREIEEKGLSPDSITFNTLLDGLYSKGRFEEG 216
Query: 120 LSVY-----NMLRYSKRSMCKAL 137
V+ N + RS C L
Sbjct: 217 EKVWEQMSVNNVAPGVRSYCSKL 239
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 29/125 (23%), Positives = 62/125 (49%), Gaps = 3/125 (2%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYD-KYDVVLLNSMLCAYCRTGDMESVMHVMRKLDEL 59
+++A+ S ++ ++L D + K D+V N+++ A+C G +S + V+R+++E
Sbjct: 132 LLAAYLHSHKYDVVQELFRDLPTQLSIKPDLVTYNTIIKAFCEKGSFDSALSVLREIEEK 191
Query: 60 AISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPE-EELCSSLIFHLGKMRAHSE 118
+SPD TF+ L+ + + + M P CS L+ L +++ E
Sbjct: 192 GLSPDSITFNTLLDGLYSKGRFEEGEKVWEQMSVNNVAPGVRSYCSKLV-GLAEVKKAGE 250
Query: 119 ALSVY 123
A+ ++
Sbjct: 251 AVELF 255
>gi|32489921|emb|CAE05513.1| OSJNBa0038P21.6 [Oryza sativa Japonica Group]
Length = 648
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 21/107 (19%), Positives = 48/107 (44%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ CR+ C +E L A K+D++ N ++ A + G + + +
Sbjct: 447 VLGGLCRNNCTDEANMLLEKLFAMNVKFDIITFNIVISAMLKVGRRQEAKELFAAISTYG 506
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLI 107
+ P +T++++I KE+ Y A + + + G P+ L + ++
Sbjct: 507 LVPTVHTYNLMISNLIKEESYEEADNLFISVEKSGRAPDSRLLNHIV 553
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/126 (23%), Positives = 58/126 (46%)
Query: 29 DVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYMLAYRTM 88
DV N+++ + + G+++ + K+ E ++SPD T++ LI CK K + + R +
Sbjct: 63 DVCSYNTLIDGFSKEGEVDKAYELFYKMIEQSVSPDVVTYNSLIDGLCKTKEMVKSERVL 122
Query: 89 VDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVYNMLRYSKRSMCKALHEKILHILISG 148
M G +P + +SLI+ E++ V+ + S C +H L
Sbjct: 123 EQMVDAGIRPNNKTYNSLIYGYSTAGMWKESVRVFKEMSSSGLIPCVVNCNSFIHALCRH 182
Query: 149 KLLKDA 154
+K+A
Sbjct: 183 NRIKEA 188
Score = 41.2 bits (95), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 29/124 (23%), Positives = 55/124 (44%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I F + G ++ +L + DVV NS++ C+T +M V+ ++ +
Sbjct: 70 LIDGFSKEGEVDKAYELFYKMIEQSVSPDVVTYNSLIDGLCKTKEMVKSERVLEQMVDAG 129
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
I P+ T++ LI + M+ + R +M G P C+S I L + EA
Sbjct: 130 IRPNNKTYNSLIYGYSTAGMWKESVRVFKEMSSSGLIPCVVNCNSFIHALCRHNRIKEAK 189
Query: 121 SVYN 124
+++
Sbjct: 190 DIFD 193
Score = 38.9 bits (89), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 32/126 (25%), Positives = 58/126 (46%), Gaps = 6/126 (4%)
Query: 2 ISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTG---DMESVMHVMRKLDE 58
I A CR +E K + K K +++ +++L Y G +M S++++M
Sbjct: 176 IHALCRHNRIKEAKDIFDSMVLKGPKPNIISYSTLLHGYAAEGCFANMNSLVNLMVSK-- 233
Query: 59 LAISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSE 118
I P++ F+ILI + + M A DM KG P+ +++I L ++ +
Sbjct: 234 -GIVPNHRFFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCRIGRLDD 292
Query: 119 ALSVYN 124
AL +N
Sbjct: 293 ALHKFN 298
>gi|15231438|ref|NP_187385.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75204605|sp|Q9SFV9.1|PP218_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g07290, mitochondrial; Flags: Precursor
gi|6642636|gb|AAF20217.1|AC012395_4 hypothetical protein [Arabidopsis thaliana]
gi|332641002|gb|AEE74523.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 880
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/99 (23%), Positives = 50/99 (50%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ +C+ G +L E + K +V N ++ CR G +H+++++ +
Sbjct: 377 LINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKAVHLLKRMLDNG 436
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPE 99
+SPD ++++LI C+E AY+ + M+ +P+
Sbjct: 437 LSPDIVSYNVLIDGLCREGHMNTAYKLLSSMNCFDIEPD 475
Score = 43.1 bits (100), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 47/98 (47%)
Query: 29 DVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYMLAYRTM 88
D+V N ++ CR G M + ++ ++ I PD TF +I FCK+ +A +
Sbjct: 440 DIVSYNVLIDGLCREGHMNTAYKLLSSMNCFDIEPDCLTFTAIINAFCKQGKADVASAFL 499
Query: 89 VDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVYNML 126
M RKG +E ++LI + K+ +AL + L
Sbjct: 500 GLMLRKGISLDEVTGTTLIDGVCKVGKTRDALFILETL 537
Score = 40.8 bits (94), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 24/99 (24%), Positives = 45/99 (45%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I A C G ++ L + + K +V ++ CR G +E V RK+ +
Sbjct: 307 LIKALCDRGLIDKAFNLFDEMIPRGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDR 366
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPE 99
I P T++ LI +CK+ + A+ + M ++ +P
Sbjct: 367 IFPSVITYNALINGYCKDGRVVPAFELLTVMEKRACKPN 405
>gi|302799689|ref|XP_002981603.1| hypothetical protein SELMODRAFT_114722 [Selaginella moellendorffii]
gi|300150769|gb|EFJ17418.1| hypothetical protein SELMODRAFT_114722 [Selaginella moellendorffii]
Length = 609
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 40/153 (26%), Positives = 65/153 (42%), Gaps = 12/153 (7%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C + EE L + K + V NS++ A CR GDM+ ++ +
Sbjct: 437 VIEGLCGTDRTEEALTLLEEMVNKRVEPSVGTFNSVIGALCRLGDMDEAWKLLVAMAAHG 496
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQ--------PEEELCSSLIFHLGK 112
+ P T+ L++ F + +AY M RK + PE+ S+LI L K
Sbjct: 497 LEPGMVTYTTLLEGFSRTGRMEIAYELFEVMRRKAKKSSSAANLVPEQAF-SALIRGLCK 555
Query: 113 MRAHSEALSVYNMLRYSKRSMCKALHEKILHIL 145
R +A++V LR + C+ E L I+
Sbjct: 556 AREIDKAMAVVEELRSRE---CEPAEEDCLAIV 585
Score = 45.8 bits (107), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 21/76 (27%), Positives = 39/76 (51%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I FC+SG E+ ++ G E + +VV +S+L C+ GD++ + + R++
Sbjct: 195 LIDGFCKSGNLEKAMKMLGVMEGRKCVPNVVTYSSLLHGLCKAGDLDQALDLFRRMTSKG 254
Query: 61 ISPDYNTFHILIKYFC 76
P+ T+ LI C
Sbjct: 255 CVPNVVTYTTLIHGLC 270
Score = 42.7 bits (99), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 31/123 (25%), Positives = 55/123 (44%), Gaps = 1/123 (0%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ +CR G EE KQL + AK D + ++ +C +E ++ + A
Sbjct: 300 LLDGYCRLGRIEEAKQLFKEMAAKSCLPDRITYTCLVRGFCNASRLEEARFLLENMKTAA 359
Query: 61 -ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEA 119
I PD T+ I++ + + K ++ A + +M + P SSLI L K + A
Sbjct: 360 GIDPDVVTYSIVVAGYSRAKRFVEAAEFIQEMIARNVAPNAVTYSSLIDGLCKAGRVNHA 419
Query: 120 LSV 122
+ V
Sbjct: 420 MEV 422
Score = 42.4 bits (98), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 23/96 (23%), Positives = 50/96 (52%), Gaps = 1/96 (1%)
Query: 29 DVVLLNSMLCAYCRTGDMESVMHVMRKL-DELAISPDYNTFHILIKYFCKEKMYMLAYRT 87
D+V ++++ +C+ G+M+ ++R++ ++PD T+ ++ C++ A
Sbjct: 44 DLVTYSTVINGFCKQGEMDRACEILREMVTRDGMAPDVVTYTSVVDGLCRDGKMDRACEM 103
Query: 88 MVDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVY 123
+ +M KG +P++ S+LI R EAL +Y
Sbjct: 104 VREMKLKGVEPDKFTFSALITGWCNARKVDEALKLY 139
Score = 37.4 bits (85), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 20/80 (25%), Positives = 38/80 (47%), Gaps = 1/80 (1%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYD-KYDVVLLNSMLCAYCRTGDMESVMHVMRKLDEL 59
+I+ FC+ G + ++ + + DVV S++ CR G M+ ++R++
Sbjct: 51 VINGFCKQGEMDRACEILREMVTRDGMAPDVVTYTSVVDGLCRDGKMDRACEMVREMKLK 110
Query: 60 AISPDYNTFHILIKYFCKEK 79
+ PD TF LI +C +
Sbjct: 111 GVEPDKFTFSALITGWCNAR 130
Score = 37.0 bits (84), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 35/153 (22%), Positives = 64/153 (41%), Gaps = 11/153 (7%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C++G ++ + DK DVV ++ C T E + ++ ++
Sbjct: 406 LIDGLCKAGRVNHAMEVLKNV----DKPDVVTYTIVIEGLCGTDRTEEALTLLEEMVNKR 461
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLI---FHLGKMRAHS 117
+ P TF+ +I C+ A++ +V M G +P ++L+ G+M
Sbjct: 462 VEPSVGTFNSVIGALCRLGDMDEAWKLLVAMAAHGLEPGMVTYTTLLEGFSRTGRMEIAY 521
Query: 118 EALSVYNMLRYSKRSMCKA--LHEKILHILISG 148
E V M R +K+S A + E+ LI G
Sbjct: 522 ELFEV--MRRKAKKSSSAANLVPEQAFSALIRG 552
Score = 36.6 bits (83), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 34/134 (25%), Positives = 60/134 (44%), Gaps = 9/134 (6%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDME---SVMHVMRKLD 57
+I A CR G +E +L A + +V ++L + RTG ME + VMR+
Sbjct: 472 VIGALCRLGDMDEAWKLLVAMAAHGLEPGMVTYTTLLEGFSRTGRMEIAYELFEVMRRKA 531
Query: 58 ELAIS-----PDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGK 112
+ + S P+ F LI+ CK + A + ++ + +P EE C +++ L +
Sbjct: 532 KKSSSAANLVPE-QAFSALIRGLCKAREIDKAMAVVEELRSRECEPAEEDCLAIVDGLLR 590
Query: 113 MRAHSEALSVYNML 126
EA + N +
Sbjct: 591 AGRTEEAGKLINSI 604
Score = 35.0 bits (79), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 19/77 (24%), Positives = 35/77 (45%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C + + + L + A D V N++L YCR G +E + +++ +
Sbjct: 265 LIHGLCAAHKVDAARLLMDEMTATCCPADTVSYNALLDGYCRLGRIEEAKQLFKEMAAKS 324
Query: 61 ISPDYNTFHILIKYFCK 77
PD T+ L++ FC
Sbjct: 325 CLPDRITYTCLVRGFCN 341
>gi|302142099|emb|CBI19302.3| unnamed protein product [Vitis vinifera]
Length = 609
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/97 (22%), Positives = 43/97 (44%)
Query: 2 ISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAI 61
+ C+ + +L + K K DVV N ++ C+ G ++ + + +
Sbjct: 89 VQTTCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGICKEGRLDEAIKFLNNMPSYGC 148
Query: 62 SPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQP 98
P+ T +I+++ C +M A + + DM RKG P
Sbjct: 149 QPNVITHNIILRSMCSTGRWMDAEKLLSDMLRKGCSP 185
Score = 44.3 bits (103), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 26/98 (26%), Positives = 49/98 (50%)
Query: 29 DVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYMLAYRTM 88
D+V N++L A C+ G ++ + ++ +L SP T++ +I K A + +
Sbjct: 256 DIVTYNTLLTALCKDGKVDVAVEILNQLSSKGCSPVLITYNTVIDGLSKVGKTERAIKLL 315
Query: 89 VDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVYNML 126
+M RKG +P+ SSL+ L + EA+ ++ L
Sbjct: 316 DEMRRKGLKPDIITYSSLVSGLSREGKVDEAIKFFHDL 353
Score = 38.9 bits (89), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 29/126 (23%), Positives = 58/126 (46%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ + C +G + + ++L D K VV N ++ CR G + + ++ K+
Sbjct: 158 ILRSMCSTGRWMDAEKLLSDMLRKGCSPSVVTFNILINFLCRQGLLGRAIDILEKMPMHG 217
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+P+ +++ L+ FCKEK A + M +G P+ ++L+ L K A+
Sbjct: 218 CTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAV 277
Query: 121 SVYNML 126
+ N L
Sbjct: 278 EILNQL 283
Score = 38.9 bits (89), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 22/99 (22%), Positives = 43/99 (43%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ C+ G +E + + + + +V+ N +L + C TG ++ +
Sbjct: 123 LINGICKEGRLDEAIKFLNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLSDMLRKG 182
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPE 99
SP TF+ILI + C++ + A + M G P
Sbjct: 183 CSPSVVTFNILINFLCRQGLLGRAIDILEKMPMHGCTPN 221
Score = 36.6 bits (83), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 29/126 (23%), Positives = 53/126 (42%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I + G E +L + K K D++ +S++ R G ++ + L+ L
Sbjct: 298 VIDGLSKVGKTERAIKLLDEMRRKGLKPDIITYSSLVSGLSREGKVDEAIKFFHDLEGLG 357
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
I P+ T++ ++ CK + A + M K +P E + LI + EAL
Sbjct: 358 IRPNAITYNSIMLGLCKSRQTDRAIDFLAYMISKRCKPTEATYTILIEGIAYEGLAKEAL 417
Query: 121 SVYNML 126
+ N L
Sbjct: 418 DLLNEL 423
>gi|302761794|ref|XP_002964319.1| hypothetical protein SELMODRAFT_63559 [Selaginella moellendorffii]
gi|300168048|gb|EFJ34652.1| hypothetical protein SELMODRAFT_63559 [Selaginella moellendorffii]
Length = 384
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/127 (20%), Positives = 62/127 (48%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I + R G F+E +L + + DV N + Y + G +E + ++ ++D
Sbjct: 129 LIQGYGRKGLFKEALELYDEMDGVGCAKDVHTYNIAIAMYGKRGLLEDMERLLDEMDTKG 188
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ PD T++ L+ + K+ ++ A+ + +M G++P + ++ K ++ +EA
Sbjct: 189 VPPDQVTYNTLLDVYAKKSYFVKAHEILREMTEAGYRPNIWTYNIMLSSARKEQSVAEAT 248
Query: 121 SVYNMLR 127
++ L+
Sbjct: 249 QLFENLK 255
Score = 35.8 bits (81), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 30/129 (23%), Positives = 56/129 (43%), Gaps = 4/129 (3%)
Query: 27 KYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYMLAYR 86
K D +L N ++ +G +E+ ++ + + +S + T+ LIK + +
Sbjct: 50 KPDEILYNCLVNGLVNSGRLEAAEKILDDMKQDKVSANLVTYTNLIKEYANAGRLQDCRK 109
Query: 87 TMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVYNMLRYSKRSMCKALHEKILHILI 146
+M KG P ++LI G+ EAL +Y+ + K +H + I +
Sbjct: 110 LFQEMKDKGESPNSWTYNALIQGYGRKGLFKEALELYDEM--DGVGCAKDVHTYNIAIAM 167
Query: 147 SGK--LLKD 153
GK LL+D
Sbjct: 168 YGKRGLLED 176
>gi|356513139|ref|XP_003525271.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g21222-like [Glycine max]
Length = 621
Score = 46.6 bits (109), Expect = 0.004, Method: Composition-based stats.
Identities = 31/107 (28%), Positives = 48/107 (44%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I A+C EE + A + DVV N+M AY + G+ E ++ K+
Sbjct: 207 LIQAWCTKKKLEEAWNVLHKMVASGIQPDVVTYNTMARAYAQNGETEKAERLILKMQYNK 266
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLI 107
+ P+ T I+I +CKE A R + M G P + +SLI
Sbjct: 267 VKPNERTCGIIISGYCKEGNMTEALRFLYRMKELGVHPNPVVFNSLI 313
Score = 41.6 bits (96), Expect = 0.11, Method: Composition-based stats.
Identities = 21/75 (28%), Positives = 38/75 (50%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+++A R F+ L K D +LLN+M+ A+ +G ++ M + +K+ E
Sbjct: 101 LVAALTRQKRFKSIPALLSKVADNGMKPDSILLNAMINAFSDSGKVDEAMKIFQKMKEYG 160
Query: 61 ISPDYNTFHILIKYF 75
P +T++ LIK F
Sbjct: 161 CKPTTSTYNTLIKGF 175
Score = 38.9 bits (89), Expect = 0.76, Method: Composition-based stats.
Identities = 21/99 (21%), Positives = 43/99 (43%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+ + R+G + + L + +VV+ +++ +C G M+ + K+ E+
Sbjct: 382 LAKGYVRAGQPRKAESLLTSMSKYGVQTNVVIFTTIISGWCAAGKMDRAFSLCEKMHEMG 441
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPE 99
SP+ T+ LI + + K A + M +G PE
Sbjct: 442 TSPNLKTYETLIWGYGEAKQPWKAEEILSTMEERGVVPE 480
>gi|302768589|ref|XP_002967714.1| hypothetical protein SELMODRAFT_63558 [Selaginella moellendorffii]
gi|300164452|gb|EFJ31061.1| hypothetical protein SELMODRAFT_63558 [Selaginella moellendorffii]
Length = 384
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/127 (20%), Positives = 62/127 (48%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I + R G F+E +L + + DV N + Y + G +E + ++ ++D
Sbjct: 129 LIQGYGRKGLFKEALELYDEMDGVGCAKDVHTYNIAIAMYGKRGLLEDMERLLDEMDTKG 188
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ PD T++ L+ + K+ ++ A+ + +M G++P + ++ K ++ +EA
Sbjct: 189 VPPDQVTYNTLLDVYAKKSYFVKAHEILREMTEAGYRPNIWTYNIMLSSARKEQSVAEAT 248
Query: 121 SVYNMLR 127
++ L+
Sbjct: 249 QLFENLK 255
>gi|449525162|ref|XP_004169587.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At1g73710-like [Cucumis sativus]
Length = 1026
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 34/130 (26%), Positives = 61/130 (46%), Gaps = 7/130 (5%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYD----KYDVVLLNSMLCAYCRTGDMESVMHVMRKL 56
+I A+ G + E + + F K D K DV+ N M+ AY + E + + +
Sbjct: 501 IIDAYAEKGLWFEAESI---FLWKRDLAGKKXDVMEYNVMIKAYGKAELYEKAFLLFKSM 557
Query: 57 DELAISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAH 116
PD T++ LI+ F + A R + +M R G +P + S++I ++
Sbjct: 558 KNRGTWPDECTYNSLIQMFSGGDLVDEARRLLTEMQRMGFKPTCQTFSAVIASYARLGLM 617
Query: 117 SEALSVYNML 126
S+A+ VY+M+
Sbjct: 618 SDAVEVYDMM 627
>gi|359485438|ref|XP_003633275.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Vitis vinifera]
Length = 572
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/123 (22%), Positives = 51/123 (41%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C G E QL + + DV+ +++ C+ G+ + + +R +++
Sbjct: 130 LIRGLCVEGKIGEALQLFDKMTGEGFQPDVLTYGTLINGLCKVGNTSTAIRFLRSMEQRN 189
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
P + +I CK++ A DM KG P SSLI L + EA+
Sbjct: 190 CRPTVVVYSTIIDSLCKDRQLTEALSLFSDMLAKGISPNNFTYSSLIHGLCILGHWKEAI 249
Query: 121 SVY 123
++
Sbjct: 250 RLF 252
Score = 40.0 bits (92), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 28/124 (22%), Positives = 52/124 (41%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I++FC + GD + +++ C G + + + K+
Sbjct: 95 LINSFCHLNRLGFAFSVLGDILKLGYQPSTATFTTLIRGLCVEGKIGEALQLFDKMTGEG 154
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
PD T+ LI CK A R + M ++ +P + S++I L K R +EAL
Sbjct: 155 FQPDVLTYGTLINGLCKVGNTSTAIRFLRSMEQRNCRPTVVVYSTIIDSLCKDRQLTEAL 214
Query: 121 SVYN 124
S+++
Sbjct: 215 SLFS 218
Score = 39.3 bits (90), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 23/95 (24%), Positives = 45/95 (47%)
Query: 30 VVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYMLAYRTMV 89
+V + +L + R +V+ + +++D I + T +ILI FC A+ +
Sbjct: 54 IVDFSKLLTSITRMKHYSTVLSLYKQMDSFGIPHNTYTLNILINSFCHLNRLGFAFSVLG 113
Query: 90 DMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVYN 124
D+ + G+QP ++LI L EAL +++
Sbjct: 114 DILKLGYQPSTATFTTLIRGLCVEGKIGEALQLFD 148
Score = 38.1 bits (87), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 21/95 (22%), Positives = 40/95 (42%)
Query: 5 FCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPD 64
C++ E L E D+ + + ++ CR G++E+ + KL + PD
Sbjct: 414 LCKNHRLAEAMVLLKVIEGTNLDPDIHIYSIVMDGMCRAGELEAARDLFSKLSSKGLHPD 473
Query: 65 YNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPE 99
T+ I+I C++ + A + +M G P
Sbjct: 474 VRTYTIMINGLCQQGLLAEASKLFGEMDENGCSPN 508
Score = 36.2 bits (82), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 28/118 (23%), Positives = 55/118 (46%), Gaps = 5/118 (4%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYD-KYDVVLLNSMLCAYCRTGDMESVMHVMRKLDEL 59
++ A C+ G + + D + D K DVV NS++ +C +M ++V +
Sbjct: 270 LVDALCKEGMVVKAHYVV-DVMIQSDLKPDVVTYNSLMDGHCLRSEMGKTVNVFDTMVRK 328
Query: 60 AISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIF---HLGKMR 114
P ++ LI +CK ++ A +M ++G P+ ++LI H+G++R
Sbjct: 329 GCVPSVISYTTLINGYCKIQIMDKAMGLFEEMSQQGLIPDTVTYNTLIHGLCHVGRLR 386
>gi|357167759|ref|XP_003581319.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g09680-like [Brachypodium distachyon]
Length = 554
Score = 46.6 bits (109), Expect = 0.004, Method: Composition-based stats.
Identities = 30/127 (23%), Positives = 56/127 (44%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+IS CR+ + L + K DV +++ +CRTG ME+ + + ++ +
Sbjct: 226 LISGMCRARDLDAVDGLYKEMSDVGVKPDVYTYGALIKGFCRTGRMENAVKMFNEMRDTG 285
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
++P+ F LI CKE DM +G P+ ++L+ L + R A
Sbjct: 286 VNPNAVVFTTLIDAHCKEGNVNAGMDLYQDMRVRGVMPDLVAYNALVNGLCRARNLKAAE 345
Query: 121 SVYNMLR 127
S+ ++
Sbjct: 346 SIVEEMK 352
Score = 45.1 bits (105), Expect = 0.011, Method: Composition-based stats.
Identities = 32/114 (28%), Positives = 57/114 (50%), Gaps = 3/114 (2%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I AFCR G + +L + + K K VV N ++ C+ G M++ ++ + +
Sbjct: 436 VIDAFCRKGDVKTGFKLLKEMQNKGKKPGVVTYNVIMNGLCKLGQMKNADMLLHAMLNIG 495
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMR 114
+SPD T++IL+ CK +A ++ KG P+ + +SLI L K +
Sbjct: 496 VSPDDITYNILLDGQCKHG--KVANSEELE-SSKGMVPDFAVYTSLISELAKKK 546
Score = 44.7 bits (104), Expect = 0.012, Method: Composition-based stats.
Identities = 21/78 (26%), Positives = 41/78 (52%)
Query: 30 VVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYMLAYRTMV 89
VV N+++ CR D+++V + +++ ++ + PD T+ LIK FC+ A +
Sbjct: 220 VVTFNTLISGMCRARDLDAVDGLYKEMSDVGVKPDVYTYGALIKGFCRTGRMENAVKMFN 279
Query: 90 DMHRKGHQPEEELCSSLI 107
+M G P + ++LI
Sbjct: 280 EMRDTGVNPNAVVFTTLI 297
Score = 43.9 bits (102), Expect = 0.021, Method: Composition-based stats.
Identities = 21/107 (19%), Positives = 52/107 (48%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I FCR+G E ++ + + V+ +++ A+C+ G++ + M + + +
Sbjct: 261 LIKGFCRTGRMENAVKMFNEMRDTGVNPNAVVFTTLIDAHCKEGNVNAGMDLYQDMRVRG 320
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLI 107
+ PD ++ L+ C+ + A + +M G +P++ ++LI
Sbjct: 321 VMPDLVAYNALVNGLCRARNLKAAESIVEEMKNAGLKPDKVTYTTLI 367
Score = 43.1 bits (100), Expect = 0.038, Method: Composition-based stats.
Identities = 21/98 (21%), Positives = 43/98 (43%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C+ G + + K D V +++ + G V+R++ E A
Sbjct: 366 LIDGCCKDGKLDMAMDIKQKMAEKEVSLDEVTYTALISGLSKAGRPVDAERVLREMMEAA 425
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQP 98
+ PD T+ ++I FC++ ++ + +M KG +P
Sbjct: 426 LEPDNTTYTMVIDAFCRKGDVKTGFKLLKEMQNKGKKP 463
Score = 38.9 bits (89), Expect = 0.73, Method: Composition-based stats.
Identities = 26/112 (23%), Positives = 48/112 (42%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I A C+ G L D + D+V N+++ CR ++++ ++ ++
Sbjct: 296 LIDAHCKEGNVNAGMDLYQDMRVRGVMPDLVAYNALVNGLCRARNLKAAESIVEEMKNAG 355
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGK 112
+ PD T+ LI CK+ +A M K +E ++LI L K
Sbjct: 356 LKPDKVTYTTLIDGCCKDGKLDMAMDIKQKMAEKEVSLDEVTYTALISGLSK 407
>gi|449508997|ref|XP_004163464.1| PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
mitochondrial-like [Cucumis sativus]
Length = 732
Score = 46.6 bits (109), Expect = 0.004, Method: Composition-based stats.
Identities = 29/124 (23%), Positives = 58/124 (46%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+++ C++G EE + + A+ + V+ N ++CA CR + ++++ ++
Sbjct: 431 LVNGLCKAGLLEEAGLVLHEMSARGLTINSVIYNCLICALCRKEKVHVALNLLSEMCTKG 490
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
PD T++ LI CK A+R +M G ++LI L + A +AL
Sbjct: 491 CKPDLFTYNSLIYGLCKVDRIDEAFRLFHNMLLDGAVANNVTYNTLIHALLRRGAFQKAL 550
Query: 121 SVYN 124
++ N
Sbjct: 551 TLVN 554
Score = 43.1 bits (100), Expect = 0.041, Method: Composition-based stats.
Identities = 29/127 (22%), Positives = 61/127 (48%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I A R G F++ L D + D + N ++ A+C+ G++E + + ++
Sbjct: 536 LIHALLRRGAFQKALTLVNDMLFRGCTLDKITYNGLIKAFCKVGNIEKGLELYEQMIMDG 595
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ D + +I+I CK A+ + D +G P+ +S++ L K+ EAL
Sbjct: 596 LGADTISCNIMINGLCKVGKVDNAFEFLRDAINRGFVPDIVTYNSVLNGLCKVGRIKEAL 655
Query: 121 SVYNMLR 127
++++ L+
Sbjct: 656 NLFDRLQ 662
Score = 40.4 bits (93), Expect = 0.22, Method: Composition-based stats.
Identities = 21/80 (26%), Positives = 39/80 (48%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
MI+ C+ G + + D + D+V NS+L C+ G ++ +++ +L
Sbjct: 606 MINGLCKVGKVDNAFEFLRDAINRGFVPDIVTYNSVLNGLCKVGRIKEALNLFDRLQVEG 665
Query: 61 ISPDYNTFHILIKYFCKEKM 80
+ PD T++ I + CKE M
Sbjct: 666 VRPDAFTYNTFISWQCKEGM 685
Score = 39.3 bits (90), Expect = 0.54, Method: Composition-based stats.
Identities = 27/158 (17%), Positives = 69/158 (43%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ C+ G + L + + + +V+ ++ C+ G +E V+ ++
Sbjct: 396 LMHGLCKEGSLSFARDLVNEMSRRGCEPNVITYAILVNGLCKAGLLEEAGLVLHEMSARG 455
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
++ + ++ LI C+++ +A + +M KG +P+ +SLI+ L K+ EA
Sbjct: 456 LTINSVIYNCLICALCRKEKVHVALNLLSEMCTKGCKPDLFTYNSLIYGLCKVDRIDEAF 515
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLKDAYIVV 158
+++ + + ++H L+ + A +V
Sbjct: 516 RLFHNMLLDGAVANNVTYNTLIHALLRRGAFQKALTLV 553
Score = 35.8 bits (81), Expect = 5.6, Method: Composition-based stats.
Identities = 22/99 (22%), Positives = 45/99 (45%), Gaps = 5/99 (5%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRK-LDEL 59
++ CR G E +++ K + +LN+++ Y +G ++ + + +
Sbjct: 329 LLHGLCRIGKLNEARKIL----IKIPCPNNAILNTLINGYVMSGQLKEAQSFLNETMINF 384
Query: 60 AISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQP 98
PD T++IL+ CKE A + +M R+G +P
Sbjct: 385 GFQPDIFTYNILMHGLCKEGSLSFARDLVNEMSRRGCEP 423
>gi|302799124|ref|XP_002981321.1| hypothetical protein SELMODRAFT_114398 [Selaginella moellendorffii]
gi|300150861|gb|EFJ17509.1| hypothetical protein SELMODRAFT_114398 [Selaginella moellendorffii]
Length = 457
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 36/159 (22%), Positives = 67/159 (42%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++S F R G F + L D + ++ N++L +C+ GDM + ++ L
Sbjct: 198 LLSGFSRKGEFGRVQSLFKDMLRQGCVPNIFTFNNLLDGFCKMGDMVEAHRLFLEMRSLG 257
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
PD +++ LI+ C + A R + +M R G P+ + LI K A A+
Sbjct: 258 CPPDVVSYNTLIRGMCSKGKPHEAQRLLREMIRSGVGPDIVSYNILIDGYSKSGALDHAI 317
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLKDAYIVVK 159
++ + S + I+ L + A++V K
Sbjct: 318 KLFYEIPKSGLEPDAFSYSTIIDCLCRAGKVGAAFVVFK 356
Score = 42.0 bits (97), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 30/128 (23%), Positives = 56/128 (43%), Gaps = 1/128 (0%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ CR +E +L + + +VV S+L C+ G ++ + + ++
Sbjct: 93 LIAGLCRGQKVDEAAELLNEMIDGGHQPNVVTYGSLLSGLCKMGKLKEAVDLFSRMVYRG 152
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
PD +++LI F K+ AYR +M KG P +SL+ +
Sbjct: 153 CPPDGVVYNVLIDGFSKKGDMGEAYRLFEEMLEKGCIPTVFTYNSLLSGFSRKGEFGRVQ 212
Query: 121 SVY-NMLR 127
S++ +MLR
Sbjct: 213 SLFKDMLR 220
Score = 39.3 bits (90), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 25/93 (26%), Positives = 42/93 (45%)
Query: 36 MLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKG 95
+L + C+ E V R + SP+ ++ ILI C+ + A + +M G
Sbjct: 58 LLRSLCQAQRFEEARSVFRGMAAQGCSPNVFSYSILIAGLCRGQKVDEAAELLNEMIDGG 117
Query: 96 HQPEEELCSSLIFHLGKMRAHSEALSVYNMLRY 128
HQP SL+ L KM EA+ +++ + Y
Sbjct: 118 HQPNVVTYGSLLSGLCKMGKLKEAVDLFSRMVY 150
Score = 38.9 bits (89), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 32/160 (20%), Positives = 65/160 (40%), Gaps = 21/160 (13%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C G E ++L + D+V N ++ Y ++G ++ + + ++ +
Sbjct: 268 LIRGMCSKGKPHEAQRLLREMIRSGVGPDIVSYNILIDGYSKSGALDHAIKLFYEIPKSG 327
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEA- 119
+ PD ++ +I C+ A+ DM G P+ + L+ L + +E+
Sbjct: 328 LEPDAFSYSTIIDCLCRAGKVGAAFVVFKDMIANGSAPDAAVVIPLVIGLCRGERLTESC 387
Query: 120 --------------LSVYNMLRY----SKRS--MCKALHE 139
+ YN+L Y +KRS +C+ HE
Sbjct: 388 ELFQAMVKFECVPLIPEYNLLMYKLCKAKRSDDVCEIFHE 427
Score = 37.4 bits (85), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 31/128 (24%), Positives = 55/128 (42%), Gaps = 1/128 (0%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I F + G E +L + K V NS+L + R G+ V + + +
Sbjct: 163 LIDGFSKKGDMGEAYRLFEEMLEKGCIPTVFTYNSLLSGFSRKGEFGRVQSLFKDMLRQG 222
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHL-GKMRAHSEA 119
P+ TF+ L+ FCK + A+R ++M G P+ ++LI + K + H
Sbjct: 223 CVPNIFTFNNLLDGFCKMGDMVEAHRLFLEMRSLGCPPDVVSYNTLIRGMCSKGKPHEAQ 282
Query: 120 LSVYNMLR 127
+ M+R
Sbjct: 283 RLLREMIR 290
>gi|242082131|ref|XP_002445834.1| hypothetical protein SORBIDRAFT_07g026590 [Sorghum bicolor]
gi|241942184|gb|EES15329.1| hypothetical protein SORBIDRAFT_07g026590 [Sorghum bicolor]
Length = 426
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/105 (25%), Positives = 44/105 (41%), Gaps = 3/105 (2%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ R+G EE K A + DV NS+ A C GD++ + ++
Sbjct: 257 LVDGLVRAGHLEEAKAFALRMTKEGILPDVATFNSLAEALCNAGDVDFAVALLADASSRG 316
Query: 61 ISPD---YNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEEL 102
+ PD + + +IK CK + A+ DM KGH P +
Sbjct: 317 LCPDISHTSLYAAIIKALCKAGRFADAFAFFGDMKMKGHPPNRPV 361
Score = 40.0 bits (92), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 17/66 (25%), Positives = 31/66 (46%)
Query: 34 NSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHR 93
N++L A C G+ ++R++ ++PD TF L+ +C A + DM
Sbjct: 185 NALLDALCANGNFTGAYKLLRRMARKGVAPDRATFSTLVDSWCAAGKLNEAQAFLDDMAS 244
Query: 94 KGHQPE 99
+G +P
Sbjct: 245 RGFRPP 250
>gi|255565671|ref|XP_002523825.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223536913|gb|EEF38551.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 528
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 32/136 (23%), Positives = 60/136 (44%), Gaps = 3/136 (2%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I A CR G + + + + + N++L + + G E V+ V ++ +
Sbjct: 287 VIDALCRCGQITRAHDVFAEMLDVGCEPNSITFNNLLRVHVKAGRTEKVLQVYNQMKRMG 346
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
PD T++ LI+ CK+ A + + M +KG P + L + K+R + A
Sbjct: 347 CPPDTVTYNFLIESHCKDGNLDEALKVLNSMVKKGCSPNASTFNGLFGSIAKLRDVNGAH 406
Query: 121 SVYNMLRYSKRSMCKA 136
+Y ++ K CKA
Sbjct: 407 RLYAKMKELK---CKA 419
Score = 40.8 bits (94), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 27/127 (21%), Positives = 55/127 (43%), Gaps = 1/127 (0%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+IS CR E + + K++ DV++ +++ +CR G++ V ++
Sbjct: 218 LISILCRKRRATEAQSFFDSLKDKFEP-DVIVYTNLVRGWCRAGNIPEAERVFTEMKVAG 276
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
P+ T+ I+I C+ A+ +M G +P ++L+ K + L
Sbjct: 277 CMPNVYTYTIVIDALCRCGQITRAHDVFAEMLDVGCEPNSITFNNLLRVHVKAGRTEKVL 336
Query: 121 SVYNMLR 127
VYN ++
Sbjct: 337 QVYNQMK 343
>gi|224130786|ref|XP_002328376.1| predicted protein [Populus trichocarpa]
gi|222838091|gb|EEE76456.1| predicted protein [Populus trichocarpa]
Length = 599
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 40/130 (30%), Positives = 60/130 (46%), Gaps = 6/130 (4%)
Query: 28 YDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYMLAYRT 87
++V LN ++ CR + + V+ K+ +L I PD TF+ LI C E A
Sbjct: 125 HNVYSLNILINCLCRLNHVVFAISVLGKMFKLGIQPDAITFNTLINGRCIEGEIKEAVGL 184
Query: 88 MVDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVYNMLRYSKRSMCKA---LHEKILHI 144
+M R+GHQP+ S++I L K S AL +LR + CK + I+
Sbjct: 185 FNEMVRRGHQPDVISYSTVINGLCKSGNTSMALQ---LLRKMEEKGCKPNLVAYTTIIDS 241
Query: 145 LISGKLLKDA 154
L L+ DA
Sbjct: 242 LCKDTLVNDA 251
Score = 43.1 bits (100), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 24/124 (19%), Positives = 59/124 (47%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ C G +E L + + + DV+ ++++ C++G+ + ++RK++E
Sbjct: 168 LINGRCIEGEIKEAVGLFNEMVRRGHQPDVISYSTVINGLCKSGNTSMALQLLRKMEEKG 227
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
P+ + +I CK+ + A + +M +G P+ S+++ + +EA
Sbjct: 228 CKPNLVAYTTIIDSLCKDTLVNDAMDLLSEMVDRGIPPDVVTYSTILHGFCSLGHLNEAT 287
Query: 121 SVYN 124
++N
Sbjct: 288 ILFN 291
Score = 42.4 bits (98), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 26/123 (21%), Positives = 57/123 (46%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ C+ G E + + K + + N+++ YC M+ V+ + +
Sbjct: 308 LVDGLCKEGMVSEARCVFEAMTKKGAEPNAYTYNALMDGYCLNNQMDEAQKVLDIMVDKG 367
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+P ++++ILI +CK + A +V+M K P+ S+L+ L ++ EAL
Sbjct: 368 CAPVVHSYNILINGYCKRRRLDEAKSLLVEMSEKELTPDTVTYSTLMQGLCQVGRPQEAL 427
Query: 121 SVY 123
+++
Sbjct: 428 NLF 430
Score = 39.3 bits (90), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 23/99 (23%), Positives = 42/99 (42%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I + C+ + L + + DVV +++L +C G + + ++
Sbjct: 238 IIDSLCKDTLVNDAMDLLSEMVDRGIPPDVVTYSTILHGFCSLGHLNEATILFNEMVGRN 297
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPE 99
+ P+ TF IL+ CKE M A M +KG +P
Sbjct: 298 VMPNTVTFTILVDGLCKEGMVSEARCVFEAMTKKGAEPN 336
Score = 38.1 bits (87), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 28/122 (22%), Positives = 49/122 (40%), Gaps = 2/122 (1%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ C+ G +E +L + + D+VL N ++ G +E + KL
Sbjct: 448 LLDGLCKHGHLDEALKLLKSMQESKIEPDIVLYNILIEGMFIAGKLEVAKELFSKLFADG 507
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
I P T+ I+IK KE + AY M G P CS + G ++ +
Sbjct: 508 IQPTIRTYTIMIKGLLKEGLSDEAYELFRKMEDDGFLPNS--CSYNVIIQGFLQNQDSST 565
Query: 121 SV 122
++
Sbjct: 566 AI 567
Score = 38.1 bits (87), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 27/124 (21%), Positives = 54/124 (43%), Gaps = 3/124 (2%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ +C+ +E K L + K D V ++++ C+ G + +++ +++
Sbjct: 378 LINGYCKRRRLDEAKSLLVEMSEKELTPDTVTYSTLMQGLCQVGRPQEALNLFKEMCSSG 437
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLI---FHLGKMRAHS 117
+ PD T+ L+ CK A + + M +P+ L + LI F GK+
Sbjct: 438 LLPDLMTYSTLLDGLCKHGHLDEALKLLKSMQESKIEPDIVLYNILIEGMFIAGKLEVAK 497
Query: 118 EALS 121
E S
Sbjct: 498 ELFS 501
>gi|242055005|ref|XP_002456648.1| hypothetical protein SORBIDRAFT_03g040130 [Sorghum bicolor]
gi|241928623|gb|EES01768.1| hypothetical protein SORBIDRAFT_03g040130 [Sorghum bicolor]
Length = 702
Score = 46.6 bits (109), Expect = 0.004, Method: Composition-based stats.
Identities = 31/157 (19%), Positives = 71/157 (45%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
MI+ FC+ G + ++ + K + + N+++ +CR + + + ++
Sbjct: 445 MINRFCKDGRTHDANEVYKNMVKDGCKPNSHVYNALINGFCRVSKINDAIKIYIEMTSNG 504
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
P T++ LI CK + Y A +M +G +P+ +SLI L + + AL
Sbjct: 505 CCPTIITYNTLIDGLCKAEKYQEASSLTKEMLERGFKPDIRTYASLIRGLCRDKKVDVAL 564
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLKDAYIV 157
+++ + + + +H ++H L S + +A+ +
Sbjct: 565 RIWDEILDAGLQVDVMVHNILIHGLCSAGKVDEAFCI 601
Score = 40.8 bits (94), Expect = 0.19, Method: Composition-based stats.
Identities = 20/77 (25%), Positives = 38/77 (49%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
M+ C+ G F+E ++ A + D V ++ CR+GD++S V + +
Sbjct: 270 MLDGLCKLGRFKEAGEVWSRMMANNHQADTVTYGILIHGLCRSGDVDSAARVYSDMVKAG 329
Query: 61 ISPDYNTFHILIKYFCK 77
+ D + ++ LIK FC+
Sbjct: 330 LVLDVSVYNSLIKGFCE 346
Score = 39.7 bits (91), Expect = 0.47, Method: Composition-based stats.
Identities = 27/122 (22%), Positives = 52/122 (42%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C +G ++ D ++ DV +SM+ +C+ G V + + +
Sbjct: 410 LIHGLCENGYANRAFEILEDARNSGEELDVFSYSSMINRFCKDGRTHDANEVYKNMVKDG 469
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
P+ + ++ LI FC+ A + ++M G P ++LI L K + EA
Sbjct: 470 CKPNSHVYNALINGFCRVSKINDAIKIYIEMTSNGCCPTIITYNTLIDGLCKAEKYQEAS 529
Query: 121 SV 122
S+
Sbjct: 530 SL 531
Score = 35.4 bits (80), Expect = 8.5, Method: Composition-based stats.
Identities = 24/123 (19%), Positives = 53/123 (43%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ FCR + ++ + + ++ N+++ C+ + + +++ E
Sbjct: 480 LINGFCRVSKINDAIKIYIEMTSNGCCPTIITYNTLIDGLCKAEKYQEASSLTKEMLERG 539
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
PD T+ LI+ C++K +A R ++ G Q + + + LI L EA
Sbjct: 540 FKPDIRTYASLIRGLCRDKKVDVALRIWDEILDAGLQVDVMVHNILIHGLCSAGKVDEAF 599
Query: 121 SVY 123
+Y
Sbjct: 600 CIY 602
>gi|255570422|ref|XP_002526170.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223534547|gb|EEF36246.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 504
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 30/110 (27%), Positives = 49/110 (44%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ CR G E L + ++ K +V+ NS++ A CR G + ++
Sbjct: 120 LINGLCRVGKLREAVNLFDEMVSQGIKANVITYNSLIHASCRFGLWKEATRTFSQMVGEG 179
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHL 110
I PD TF LI + K+ AY+ M ++G P +SL+ L
Sbjct: 180 ILPDVVTFTTLIDHLSKKGKVQEAYKIFELMIKQGEAPNIVTYNSLLNGL 229
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 33/122 (27%), Positives = 54/122 (44%), Gaps = 4/122 (3%)
Query: 27 KYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYMLAYR 86
K DV+ N+++ YC +G E M + RK+ ++P T+ IL+K + A
Sbjct: 251 KIDVISYNTLINGYCTSGKTEEAMTLFRKMQYEELTPSITTYTILLKALYQNGRIRTAKE 310
Query: 87 TMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVYNMLRYSKRSMCKALHEKILHILI 146
+M G P + + L+ L K EA+ V+ L +S+ +I ILI
Sbjct: 311 LFNNMQICGQSPSLDTYTVLLDGLCKNGCIEEAIDVFRSL----KSIKYKPSIRIYSILI 366
Query: 147 SG 148
G
Sbjct: 367 GG 368
Score = 43.9 bits (102), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 22/100 (22%), Positives = 47/100 (47%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ C++GC EE + ++ K + + + ++ + ES M + ++ +
Sbjct: 330 LLDGLCKNGCIEEAIDVFRSLKSIKYKPSIRIYSILIGGMFQARRWESAMEIFDEIPTVG 389
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEE 100
+ P+ T++I+I CKE + A R V M G + +E
Sbjct: 390 LVPNIVTYNIMINGLCKEGKLLEAERLFVQMEESGCEQDE 429
>gi|15219274|ref|NP_175740.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75192173|sp|Q9MAG8.1|PPR79_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At1g53330
gi|7769859|gb|AAF69537.1|AC008007_12 F12M16.23 [Arabidopsis thaliana]
gi|332194805|gb|AEE32926.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 471
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/117 (24%), Positives = 53/117 (45%), Gaps = 8/117 (6%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+IS+ ++G E + + K K D V N ++ +C D ES V+ ++ E
Sbjct: 264 LISSLIKAGRSNEVSMILEEMSEKGCKPDTVTYNVLINGFCVENDSESANRVLDEMVEKG 323
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPE--------EELCSSLIFH 109
+ PD ++++++ F + K + A DM R+G P+ + LC L F
Sbjct: 324 LKPDVISYNMILGVFFRIKKWEEATYLFEDMPRRGCSPDTLSYRIVFDGLCEGLQFE 380
Score = 42.7 bits (99), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 26/100 (26%), Positives = 49/100 (49%), Gaps = 2/100 (2%)
Query: 1 MISAFCRSGCFEETKQLAGD-FEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDEL 59
+I A C+ G +L + +E K K D + ++++ + + G V ++ ++ E
Sbjct: 229 LIKALCQIGELSFAFKLKDEAYEGKI-KVDAAIYSTLISSLIKAGRSNEVSMILEEMSEK 287
Query: 60 AISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPE 99
PD T+++LI FC E A R + +M KG +P+
Sbjct: 288 GCKPDTVTYNVLINGFCVENDSESANRVLDEMVEKGLKPD 327
Score = 37.0 bits (84), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 27/124 (21%), Positives = 52/124 (41%), Gaps = 3/124 (2%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ FC E ++ + K K DV+ N +L + R E ++ +
Sbjct: 299 LINGFCVENDSESANRVLDEMVEKGLKPDVISYNMILGVFFRIKKWEEATYLFEDMPRRG 358
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHL---GKMRAHS 117
SPD ++ I+ C+ + A + +M KG++P + + L GK+ S
Sbjct: 359 CSPDTLSYRIVFDGLCEGLQFEEAAVILDEMLFKGYKPRRDRLEGFLQKLCESGKLEILS 418
Query: 118 EALS 121
+ +S
Sbjct: 419 KVIS 422
>gi|302142966|emb|CBI20261.3| unnamed protein product [Vitis vinifera]
Length = 509
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 52/100 (52%), Gaps = 6/100 (6%)
Query: 2 ISAFCRSGCFEETKQLAGDFEAKYDK---YDVVLLNSMLCAYCRTGDMESVMHVMRKLDE 58
I++ ++G +L F+A ++K DV + N ++ A C + + V+R+++E
Sbjct: 264 INSLTKAGKLSTAVKL---FQAMWEKGCNPDVAICNCIIDALCFKKRIPEALEVLREMNE 320
Query: 59 LAISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQP 98
PD T++ LIK+ CK + + Y + DM +KG P
Sbjct: 321 RDCQPDVATYNSLIKHLCKIQRFEKVYELLDDMEQKGCLP 360
Score = 36.6 bits (83), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 24/114 (21%), Positives = 50/114 (43%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+++ +C G E K+ D K D + + + G + + + + + + E
Sbjct: 228 ILNGWCVLGSLREAKRFWNDIITSKCKPDKFTYGIFINSLTKAGKLSTAVKLFQAMWEKG 287
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMR 114
+PD + +I C +K A + +M+ + QP+ +SLI HL K++
Sbjct: 288 CNPDVAICNCIIDALCFKKRIPEALEVLREMNERDCQPDVATYNSLIKHLCKIQ 341
>gi|225461528|ref|XP_002282646.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g15200-like [Vitis vinifera]
Length = 546
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 52/100 (52%), Gaps = 6/100 (6%)
Query: 2 ISAFCRSGCFEETKQLAGDFEAKYDK---YDVVLLNSMLCAYCRTGDMESVMHVMRKLDE 58
I++ ++G +L F+A ++K DV + N ++ A C + + V+R+++E
Sbjct: 301 INSLTKAGKLSTAVKL---FQAMWEKGCNPDVAICNCIIDALCFKKRIPEALEVLREMNE 357
Query: 59 LAISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQP 98
PD T++ LIK+ CK + + Y + DM +KG P
Sbjct: 358 RDCQPDVATYNSLIKHLCKIQRFEKVYELLDDMEQKGCLP 397
Score = 36.6 bits (83), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 24/114 (21%), Positives = 50/114 (43%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+++ +C G E K+ D K D + + + G + + + + + + E
Sbjct: 265 ILNGWCVLGSLREAKRFWNDIITSKCKPDKFTYGIFINSLTKAGKLSTAVKLFQAMWEKG 324
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMR 114
+PD + +I C +K A + +M+ + QP+ +SLI HL K++
Sbjct: 325 CNPDVAICNCIIDALCFKKRIPEALEVLREMNERDCQPDVATYNSLIKHLCKIQ 378
>gi|449443698|ref|XP_004139614.1| PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
mitochondrial-like [Cucumis sativus]
Length = 732
Score = 46.2 bits (108), Expect = 0.004, Method: Composition-based stats.
Identities = 29/124 (23%), Positives = 58/124 (46%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+++ C++G EE + + A+ + V+ N ++CA CR + ++++ ++
Sbjct: 431 LVNGLCKAGLLEEAGLVLHEMSARGLTINSVIYNCLICALCRKEKVHVALNLLSEMCTKG 490
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
PD T++ LI CK A+R +M G ++LI L + A +AL
Sbjct: 491 CKPDLFTYNSLIYGLCKVDRIDEAFRLFHNMLLDGAVANNVTYNTLIHALLRRGAFQKAL 550
Query: 121 SVYN 124
++ N
Sbjct: 551 TLVN 554
Score = 43.1 bits (100), Expect = 0.042, Method: Composition-based stats.
Identities = 29/127 (22%), Positives = 61/127 (48%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I A R G F++ L D + D + N ++ A+C+ G++E + + ++
Sbjct: 536 LIHALLRRGAFQKALTLVNDMLFRGCTLDKITYNGLIKAFCKVGNIEKGLELYEQMIMDG 595
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ D + +I+I CK A+ + D +G P+ +S++ L K+ EAL
Sbjct: 596 LGADTISCNIMINGLCKVGKVDNAFEFLRDAINRGFVPDIVTYNSVLNGLCKVGRIKEAL 655
Query: 121 SVYNMLR 127
++++ L+
Sbjct: 656 NLFDRLQ 662
Score = 40.4 bits (93), Expect = 0.23, Method: Composition-based stats.
Identities = 21/80 (26%), Positives = 39/80 (48%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
MI+ C+ G + + D + D+V NS+L C+ G ++ +++ +L
Sbjct: 606 MINGLCKVGKVDNAFEFLRDAINRGFVPDIVTYNSVLNGLCKVGRIKEALNLFDRLQVEG 665
Query: 61 ISPDYNTFHILIKYFCKEKM 80
+ PD T++ I + CKE M
Sbjct: 666 VRPDAFTYNTFISWQCKEGM 685
Score = 39.3 bits (90), Expect = 0.57, Method: Composition-based stats.
Identities = 27/158 (17%), Positives = 69/158 (43%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ C+ G + L + + + +V+ ++ C+ G +E V+ ++
Sbjct: 396 LMHGLCKEGSLSFARDLVNEMSRRGCEPNVITYAILVNGLCKAGLLEEAGLVLHEMSARG 455
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
++ + ++ LI C+++ +A + +M KG +P+ +SLI+ L K+ EA
Sbjct: 456 LTINSVIYNCLICALCRKEKVHVALNLLSEMCTKGCKPDLFTYNSLIYGLCKVDRIDEAF 515
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLKDAYIVV 158
+++ + + ++H L+ + A +V
Sbjct: 516 RLFHNMLLDGAVANNVTYNTLIHALLRRGAFQKALTLV 553
Score = 35.8 bits (81), Expect = 5.9, Method: Composition-based stats.
Identities = 22/99 (22%), Positives = 45/99 (45%), Gaps = 5/99 (5%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRK-LDEL 59
++ CR G E +++ K + +LN+++ Y +G ++ + + +
Sbjct: 329 LLHGLCRIGKLNEARKIL----IKIPCPNNAILNTLINGYVMSGQLKEAQSFLNETMINF 384
Query: 60 AISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQP 98
PD T++IL+ CKE A + +M R+G +P
Sbjct: 385 GFQPDIFTYNILMHGLCKEGSLSFARDLVNEMSRRGCEP 423
>gi|302756343|ref|XP_002961595.1| hypothetical protein SELMODRAFT_76510 [Selaginella moellendorffii]
gi|300170254|gb|EFJ36855.1| hypothetical protein SELMODRAFT_76510 [Selaginella moellendorffii]
Length = 603
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 30/129 (23%), Positives = 55/129 (42%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+IS C ++ + L D + K VV N+++ C+ G ++ V+ +
Sbjct: 296 LISGLCSIARVDDARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSG 355
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
SPD T++ L+ C+ A + DM +G P ++L+ L K EA
Sbjct: 356 QSPDVVTYNTLVHGHCRAGQTERARELLSDMVARGLAPNVVTYTALVSGLCKANRLPEAC 415
Query: 121 SVYNMLRYS 129
V+ ++ S
Sbjct: 416 GVFAQMKSS 424
Score = 42.7 bits (99), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 21/99 (21%), Positives = 41/99 (41%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C++G +E +++ + DVV N+++ +CR G E ++ +
Sbjct: 331 LIHGLCKAGRIKEAREVLDAMVSSGQSPDVVTYNTLVHGHCRAGQTERARELLSDMVARG 390
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPE 99
++P+ T+ L+ CK A M G P
Sbjct: 391 LAPNVVTYTALVSGLCKANRLPEACGVFAQMKSSGCAPN 429
Score = 42.4 bits (98), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 32/150 (21%), Positives = 61/150 (40%), Gaps = 2/150 (1%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ CR+G E ++L D A+ +VV +++ C+ + V ++
Sbjct: 366 LVHGHCRAGQTERARELLSDMVARGLAPNVVTYTALVSGLCKANRLPEACGVFAQMKSSG 425
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+P+ T+ LI FC + +M G P+ + +L L K + AL
Sbjct: 426 CAPNLFTYTALILGFCSAGQVDGGLKLFGEMVCAGISPDHVVYGTLAAELCKSGRSARAL 485
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKL 150
+ R S RS +A +++ + G L
Sbjct: 486 EILREGRESLRS--EAWGDEVYRFAVDGLL 513
Score = 42.0 bits (97), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 27/123 (21%), Positives = 53/123 (43%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C + F++ ++L D + V N ++ A C+ G +E +++K+ E
Sbjct: 51 LIHGLCMANSFDDARELFADMNRRGCPPSPVTYNVIIDASCKRGMLEEACDLIKKMIEDG 110
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
PD T++ ++ CK A +M R G P +++I L + +A
Sbjct: 111 HVPDVVTYNTVMDGLCKSGRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQAC 170
Query: 121 SVY 123
V+
Sbjct: 171 QVF 173
Score = 40.4 bits (93), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 29/143 (20%), Positives = 61/143 (42%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I A C+ G EE L DVV N+++ C++G +E + + +++ L
Sbjct: 86 IIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNTVMDGLCKSGRVEEALLLFNEMERLG 145
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+P+ + + +I C++ A + +M + P+ LI L K +EA
Sbjct: 146 CTPNRRSHNTIILGLCQQSKIDQACQVFHEMEARDIPPDSWSYGILIDGLAKAGKLNEAY 205
Query: 121 SVYNMLRYSKRSMCKALHEKILH 143
++ + S + + ++H
Sbjct: 206 KLFRRMLDSGITPSAVTYNVVIH 228
Score = 35.8 bits (81), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 30/143 (20%), Positives = 60/143 (41%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C + +E +L +K + N ++ A+C+ G M+ +++++ +
Sbjct: 226 VIHGMCLAYTLDEALELFKSMRSKGCRPSRFTFNILIDAHCKRGKMDEAFRLLKRMTDDG 285
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
PD T+ LI C A + DM ++ +P ++LI L K EA
Sbjct: 286 HVPDVVTYSTLISGLCSIARVDDARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAR 345
Query: 121 SVYNMLRYSKRSMCKALHEKILH 143
V + + S +S + ++H
Sbjct: 346 EVLDAMVSSGQSPDVVTYNTLVH 368
>gi|115437384|ref|NP_001043282.1| Os01g0546500 [Oryza sativa Japonica Group]
gi|20146451|dbj|BAB89231.1| fertility restorer -like protein [Oryza sativa Japonica Group]
gi|113532813|dbj|BAF05196.1| Os01g0546500 [Oryza sativa Japonica Group]
gi|215697396|dbj|BAG91390.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222618638|gb|EEE54770.1| hypothetical protein OsJ_02158 [Oryza sativa Japonica Group]
Length = 342
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/119 (23%), Positives = 55/119 (46%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
M+ C+SG +E +L G K +VV+ +++ A+C+ ++ + + +K+
Sbjct: 177 MLDGLCKSGLVQEAMKLFGLMREKGSIPEVVVYTAVVEAFCKARKLDDAVRIFKKMQGNG 236
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEA 119
+ P+ ++ +LI+ CK A V+M GH P L+ + K + EA
Sbjct: 237 VIPNAFSYWLLIQGLCKGGRLDDAVAFCVEMFEAGHSPNAMTFVGLVDEVCKAKGVEEA 295
>gi|147793827|emb|CAN62355.1| hypothetical protein VITISV_022418 [Vitis vinifera]
Length = 546
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 52/100 (52%), Gaps = 6/100 (6%)
Query: 2 ISAFCRSGCFEETKQLAGDFEAKYDK---YDVVLLNSMLCAYCRTGDMESVMHVMRKLDE 58
I++ ++G +L F+A ++K DV + N ++ A C + + V+R+++E
Sbjct: 301 INSLTKAGKLSTAVKL---FQAMWEKGCNPDVAICNCIIDALCFKKRIPEALEVLREMNE 357
Query: 59 LAISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQP 98
PD T++ LIK+ CK + + Y + DM +KG P
Sbjct: 358 RDCQPDVATYNSLIKHLCKIQRFEKVYELLDDMEQKGCLP 397
Score = 36.6 bits (83), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 24/114 (21%), Positives = 50/114 (43%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+++ +C G E K+ D K D + + + G + + + + + + E
Sbjct: 265 ILNGWCVLGSLREAKRFWNDIITSKCKPDKFTYGIFINSLTKAGKLSTAVKLFQAMWEKG 324
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMR 114
+PD + +I C +K A + +M+ + QP+ +SLI HL K++
Sbjct: 325 CNPDVAICNCIIDALCFKKRIPEALEVLREMNERDCQPDVATYNSLIKHLCKIQ 378
>gi|358347568|ref|XP_003637828.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355503763|gb|AES84966.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 529
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 30/129 (23%), Positives = 58/129 (44%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C+SG + G+ + D+ NS+L A C+ ++ + ++ KL +
Sbjct: 312 LIDGLCKSGRTPYALKFIGEMHYRGQPPDIFTYNSLLDALCKNYHVDKAIELLTKLKDQG 371
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
I P T++ILI CK A + D+ KG+ + +++I K E L
Sbjct: 372 IQPSVCTYNILINGLCKSGRLKDAEKVFEDLLVKGYNTDVYTYNAMIKGFCKKGLFDETL 431
Query: 121 SVYNMLRYS 129
++ + ++ S
Sbjct: 432 AMVSKMKDS 440
Score = 39.7 bits (91), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 30/126 (23%), Positives = 54/126 (42%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C+ + L + AK VV N+++C C ++ + ++ K+
Sbjct: 158 IIDGLCKDKLVNDAFNLYFEMVAKRICPSVVTYNTLICGLCIMAQLKDAIGLLHKMILED 217
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
I+P TF ILI FCKE A M ++ +P +SL+ + +A
Sbjct: 218 INPTVYTFSILIDAFCKEGKMKEAKNVFAVMMKEDVKPNIVTYNSLMDGHHLVNVVKKAK 277
Query: 121 SVYNML 126
S++N +
Sbjct: 278 SIFNTM 283
Score = 39.7 bits (91), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 18/73 (24%), Positives = 38/73 (52%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ C+SG ++ +++ D K DV N+M+ +C+ G + + ++ K+ +
Sbjct: 382 LINGLCKSGRLKDAEKVFEDLLVKGYNTDVYTYNAMIKGFCKKGLFDETLAMVSKMKDSG 441
Query: 61 ISPDYNTFHILIK 73
SPD I+I+
Sbjct: 442 CSPDAKNCEIIIR 454
Score = 37.4 bits (85), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 25/122 (20%), Positives = 51/122 (41%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C G + A+ K + V +++ C+ G + + +R++D
Sbjct: 88 LIKGLCLKGEIHKALHFHDKVVAQGFKLNQVSYGTLINGLCKVGQTRAALEFLRRIDGKL 147
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ PD ++ +I CK+K+ A+ +M K P ++LI L M +A+
Sbjct: 148 VQPDVVMYNTIIDGLCKDKLVNDAFNLYFEMVAKRICPSVVTYNTLICGLCIMAQLKDAI 207
Query: 121 SV 122
+
Sbjct: 208 GL 209
>gi|242065464|ref|XP_002454021.1| hypothetical protein SORBIDRAFT_04g023230 [Sorghum bicolor]
gi|241933852|gb|EES06997.1| hypothetical protein SORBIDRAFT_04g023230 [Sorghum bicolor]
Length = 729
Score = 46.2 bits (108), Expect = 0.004, Method: Composition-based stats.
Identities = 28/122 (22%), Positives = 52/122 (42%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C C ++ +L + ++ K D+V N++L C E +M +
Sbjct: 448 IIDGLCNERCIDDAMELLSNLQSYGCKPDIVTFNTLLKGLCSVDRWEDAEQLMVNMMHSD 507
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
PD TF+ +I C++ + + A T+ M G P + + ++ L K EAL
Sbjct: 508 CPPDATTFNTVITSLCQKGLLLQAIETLKIMAENGCIPNQSTYNIVVDALLKAGKTQEAL 567
Query: 121 SV 122
+
Sbjct: 568 KL 569
Score = 42.4 bits (98), Expect = 0.065, Method: Composition-based stats.
Identities = 24/126 (19%), Positives = 56/126 (44%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ A C++ + + L + AK + D+V N ++ A C GD++ ++++ L
Sbjct: 203 LLDATCKASGYRQAMVLLDEMRAKGCEPDIVTYNVLINAMCNEGDVDEALNILSDLPSHG 262
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
PD T+ ++K C + + +M P+E ++++ L + A+
Sbjct: 263 CKPDAVTYTPVLKSLCGSERWKEVEELFAEMASNKCAPDEVTFNTIVTSLCQQGLVDRAI 322
Query: 121 SVYNML 126
V + +
Sbjct: 323 KVVDHM 328
Score = 42.4 bits (98), Expect = 0.073, Method: Composition-based stats.
Identities = 25/99 (25%), Positives = 44/99 (44%), Gaps = 3/99 (3%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
M++ +CR+G E+ ++L D + N ++ A C G + + V +
Sbjct: 136 MVNGYCRAGRIEDARRLISGMPFPPDTFT---FNPLIRALCVRGRVPDALAVFDDMLHRG 192
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPE 99
SP T+ IL+ CK Y A + +M KG +P+
Sbjct: 193 CSPSVVTYSILLDATCKASGYRQAMVLLDEMRAKGCEPD 231
Score = 39.7 bits (91), Expect = 0.39, Method: Composition-based stats.
Identities = 24/110 (21%), Positives = 47/110 (42%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I++ C+ G + ++ D+V NS++ C ++ M ++ L
Sbjct: 413 VIASLCQKGLVDRAIKVVEQMSENGCNPDIVTYNSIIDGLCNERCIDDAMELLSNLQSYG 472
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHL 110
PD TF+ L+K C + A + MV+M P+ +++I L
Sbjct: 473 CKPDIVTFNTLLKGLCSVDRWEDAEQLMVNMMHSDCPPDATTFNTVITSL 522
Score = 37.7 bits (86), Expect = 1.7, Method: Composition-based stats.
Identities = 27/98 (27%), Positives = 42/98 (42%), Gaps = 3/98 (3%)
Query: 30 VVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYMLAYRTMV 89
VV N+M+ YCR G +E R + + PD TF+ LI+ C A
Sbjct: 130 VVTYNTMVNGYCRAGRIEDAR---RLISGMPFPPDTFTFNPLIRALCVRGRVPDALAVFD 186
Query: 90 DMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVYNMLR 127
DM +G P S L+ K + +A+ + + +R
Sbjct: 187 DMLHRGCSPSVVTYSILLDATCKASGYRQAMVLLDEMR 224
Score = 36.6 bits (83), Expect = 3.7, Method: Composition-based stats.
Identities = 19/99 (19%), Positives = 46/99 (46%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ C +E ++L + D V N+++ + C+ G ++ + V+ ++ E
Sbjct: 378 VLKGLCSIEQWEHAEELMAEMVCSDCPPDEVTFNTVIASLCQKGLVDRAIKVVEQMSENG 437
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPE 99
+PD T++ +I C E+ A + ++ G +P+
Sbjct: 438 CNPDIVTYNSIIDGLCNERCIDDAMELLSNLQSYGCKPD 476
Score = 35.4 bits (80), Expect = 8.6, Method: Composition-based stats.
Identities = 23/107 (21%), Positives = 47/107 (43%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+A C G +E + D + K D V +L + C + + V + ++
Sbjct: 238 LINAMCNEGDVDEALNILSDLPSHGCKPDAVTYTPVLKSLCGSERWKEVEELFAEMASNK 297
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLI 107
+PD TF+ ++ C++ + A + + M G P+ SS++
Sbjct: 298 CAPDEVTFNTIVTSLCQQGLVDRAIKVVDHMSEHGCIPDIVTYSSIL 344
>gi|449447783|ref|XP_004141647.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g73710-like [Cucumis sativus]
Length = 1020
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 34/130 (26%), Positives = 61/130 (46%), Gaps = 7/130 (5%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYD----KYDVVLLNSMLCAYCRTGDMESVMHVMRKL 56
+I A+ G + E + + F K D K DV+ N M+ AY + E + + +
Sbjct: 501 IIDAYAEKGLWFEAESI---FLWKRDLSGKKMDVMEYNVMIKAYGKAELYEKAFLLFKSM 557
Query: 57 DELAISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAH 116
PD T++ LI+ F + A R + +M R G +P + S++I ++
Sbjct: 558 KNRGTWPDECTYNSLIQMFSGGDLVDEARRLLTEMQRMGFKPTCQTFSAVIASYARLGLM 617
Query: 117 SEALSVYNML 126
S+A+ VY+M+
Sbjct: 618 SDAVEVYDMM 627
>gi|356561401|ref|XP_003548970.1| PREDICTED: pentatricopeptide repeat-containing protein At1g12300,
mitochondrial-like [Glycine max]
Length = 447
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 39/77 (50%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I A C+ G +E K+L + K DVV NS+L C++ +++ + K+ +
Sbjct: 281 LIDALCKEGKVKEAKKLLAEMHHKGQPADVVTYNSVLDGLCKSQNLDKATALFMKMKKWG 340
Query: 61 ISPDYNTFHILIKYFCK 77
I P+ T+ LI CK
Sbjct: 341 IQPNKYTYTALIDGLCK 357
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 30/154 (19%), Positives = 69/154 (44%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C+ + + A+ +V+ ++++ +C G + ++ ++
Sbjct: 211 IIDGLCKDKIVNQAYDFFSEMNARGIFPNVITYSTLIWGFCLAGQLMGAFSLLNEMILKN 270
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
I+P+ T++ILI CKE A + + +MH KG + +S++ L K + +A
Sbjct: 271 INPNVYTYNILIDALCKEGKVKEAKKLLAEMHHKGQPADVVTYNSVLDGLCKSQNLDKAT 330
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLKDA 154
+++ ++ K + ++ L G LK+A
Sbjct: 331 ALFMKMKKWGIQPNKYTYTALIDGLCKGGRLKNA 364
Score = 38.5 bits (88), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 18/75 (24%), Positives = 38/75 (50%)
Query: 34 NSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHR 93
++L C+ G+ + ++R +++ + PD + +I CK+K+ AY +M+
Sbjct: 174 GTLLNGLCKIGETRCAVKLLRMIEDRSTRPDVVMYSTIIDGLCKDKIVNQAYDFFSEMNA 233
Query: 94 KGHQPEEELCSSLIF 108
+G P S+LI+
Sbjct: 234 RGIFPNVITYSTLIW 248
>gi|224061569|ref|XP_002300545.1| predicted protein [Populus trichocarpa]
gi|222847803|gb|EEE85350.1| predicted protein [Populus trichocarpa]
Length = 567
Score = 46.2 bits (108), Expect = 0.004, Method: Composition-based stats.
Identities = 30/112 (26%), Positives = 50/112 (44%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+++ C+ G EE Q D +K +VV N +L + C G E ++ ++D
Sbjct: 243 LLTGLCKEGRTEEAIQFFRDLPSKGFNPNVVSCNIILRSLCCEGRWEEANELVAEMDSEE 302
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGK 112
SP T++ILI A++ + +M R QP + +I HL K
Sbjct: 303 RSPSLVTYNILIGSLASHGRIQHAFQVLDEMMRASFQPSAATFNPIISHLCK 354
Score = 36.6 bits (83), Expect = 3.8, Method: Composition-based stats.
Identities = 28/107 (26%), Positives = 44/107 (41%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+IS+ CR G QL + D +S++ C G ++ + + R L+E
Sbjct: 417 VISSLCRKGNTYPAFQLLYEMIQSGFVPDPYTYSSLIRGLCVEGMLDEALEIFRLLEEND 476
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLI 107
P F+ LI FCK L+ M KG+ P E + L+
Sbjct: 477 YRPILGNFNALILGFCKSGRTDLSLEIFEMMILKGYTPNETTYTILV 523
Score = 35.8 bits (81), Expect = 6.0, Method: Composition-based stats.
Identities = 16/78 (20%), Positives = 38/78 (48%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ + C G +EE +L + +++ +V N ++ + G ++ V+ ++ +
Sbjct: 278 ILRSLCCEGRWEEANELVAEMDSEERSPSLVTYNILIGSLASHGRIQHAFQVLDEMMRAS 337
Query: 61 ISPDYNTFHILIKYFCKE 78
P TF+ +I + CKE
Sbjct: 338 FQPSAATFNPIISHLCKE 355
>gi|449446855|ref|XP_004141186.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g55840-like [Cucumis sativus]
Length = 1079
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 31/123 (25%), Positives = 51/123 (41%), Gaps = 3/123 (2%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
MI CR+G +E QL + D++ + ++ +C+ G++ VM K+
Sbjct: 391 MIDGLCRNGLLDEAFQLLIEMCKDGVHPDIITFSVLINGFCKVGNINKAKEVMSKIYREG 450
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHL---GKMRAHS 117
P+ F LI CK A + M+ G + C+SL+ L GK+
Sbjct: 451 FVPNNVIFSTLIYNSCKVGNVYEAMKFYAAMNLNGQNADNFTCNSLVASLCENGKLVEAE 510
Query: 118 EAL 120
E L
Sbjct: 511 EFL 513
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 44/88 (50%)
Query: 36 MLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKG 95
M+ CR G ++ ++ ++ + + PD TF +LI FCK A M ++R+G
Sbjct: 391 MIDGLCRNGLLDEAFQLLIEMCKDGVHPDIITFSVLINGFCKVGNINKAKEVMSKIYREG 450
Query: 96 HQPEEELCSSLIFHLGKMRAHSEALSVY 123
P + S+LI++ K+ EA+ Y
Sbjct: 451 FVPNNVIFSTLIYNSCKVGNVYEAMKFY 478
Score = 38.9 bits (89), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 28/109 (25%), Positives = 47/109 (43%)
Query: 2 ISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAI 61
I ++G + L + E K D++ LNS+ Y R G + S ++ K +
Sbjct: 673 IDGLFKAGQSKAALYLFKEMEEKGLSLDLIALNSITDGYSRMGKVFSASSLISKTRNKNV 732
Query: 62 SPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHL 110
P+ TF+IL+ + + + M ++ M R G P SLI L
Sbjct: 733 IPNLTTFNILLHGYSRGQDIMSCFKLYNLMRRSGFFPNRLTYHSLILGL 781
Score = 38.1 bits (87), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 32/154 (20%), Positives = 64/154 (41%)
Query: 2 ISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAI 61
I + CR+ + + K + V N+++ + + G + V ++ EL +
Sbjct: 252 IDSLCRNSRSAQGYLVLKKMRNKMITPNEVSYNTLINGFVKEGKIGVATRVFNEMIELNL 311
Query: 62 SPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEALS 121
SP+ T++ILI +C + A R + M +P E +L+ L K A +
Sbjct: 312 SPNLITYNILINGYCINGNFEEALRVLDVMEANDVRPNEVTIGTLLNGLYKSAKFDVARN 371
Query: 122 VYNMLRYSKRSMCKALHEKILHILISGKLLKDAY 155
+ ++ S+ H ++ L LL +A+
Sbjct: 372 ILERYCINRTSLNCISHTVMIDGLCRNGLLDEAF 405
>gi|194705728|gb|ACF86948.1| unknown [Zea mays]
gi|414591270|tpg|DAA41841.1| TPA: fertility restorer [Zea mays]
Length = 563
Score = 46.2 bits (108), Expect = 0.004, Method: Composition-based stats.
Identities = 29/138 (21%), Positives = 62/138 (44%), Gaps = 6/138 (4%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+++ CR+G +E + + + V ++ YCR G +E +++ +++
Sbjct: 172 LVTGLCRAGKLDEAWGVLDWMLQEGCRPMVHTYTPIVQGYCRQGQIEEATNLIGFMEDAG 231
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
P+ T+++LI+ C + + + + ++ KGH+ + + LGK EAL
Sbjct: 232 CPPNAVTYNVLIRALCDDARFAEVEQVLAEIETKGHELSTVTYNIYMDALGKKGMAKEAL 291
Query: 121 SVYNMLRYSKRSMCKALH 138
+ L+ CK LH
Sbjct: 292 KQFEALQ------CKGLH 303
>gi|358344944|ref|XP_003636545.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355502480|gb|AES83683.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1280
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/107 (25%), Positives = 53/107 (49%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ A C+ G +E K + + + VV N+++ YC ++ HV+ + +
Sbjct: 269 LVDALCKEGKIKEAKNVIAVMMKEGVEPTVVTYNTLMDGYCLVNEVGKAKHVLSIISRMR 328
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLI 107
++P+ +++I+I FCK KM A +M +G P + +SLI
Sbjct: 329 VAPNSRSYNIMINGFCKIKMVDEALCLFHEMCCRGIAPHKVTYNSLI 375
Score = 43.9 bits (102), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 23/97 (23%), Positives = 45/97 (46%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C++G +L + D+V NS++ +C+ ++ + +++K+ E
Sbjct: 374 LIDGLCKAGRIPYAWELVDEMHNNCIPADIVTYNSLIDVFCKNQHVDKAIALVKKIKEHG 433
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQ 97
I P+ T++ILI CK A D+ KG+
Sbjct: 434 IQPNMCTYNILIDGLCKGGQLKNAQDVFQDLLIKGYN 470
Score = 40.0 bits (92), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 23/98 (23%), Positives = 42/98 (42%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C+ + L + K VV +S++ +C G + + ++
Sbjct: 199 IIDGLCKDKLVTDAYGLYSEMIVKRIPPTVVTFSSLIYGFCIVGKFKDAFRLFNEMVMKN 258
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQP 98
I+PD TF+IL+ CKE A + M ++G +P
Sbjct: 259 INPDAYTFNILVDALCKEGKIKEAKNVIAVMMKEGVEP 296
>gi|297746144|emb|CBI16200.3| unnamed protein product [Vitis vinifera]
Length = 1093
Score = 46.2 bits (108), Expect = 0.004, Method: Composition-based stats.
Identities = 23/98 (23%), Positives = 49/98 (50%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ C G ++E K++ D + + K ++ ++ R G ++ ++ ++
Sbjct: 665 LMEGLCSLGKYKEAKKMMFDMDYQGCKPRLLNFGVLMSDLGRRGRIDDSKTLLLEMKRRR 724
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQP 98
PD T++ILI + CKE + AY+ +V+M G +P
Sbjct: 725 FKPDVVTYNILINHLCKEGRALEAYKVLVEMQVGGCEP 762
Score = 39.3 bits (90), Expect = 0.51, Method: Composition-based stats.
Identities = 24/98 (24%), Positives = 47/98 (47%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I + G +++ Q+ + K K VV NS++ C GD++ M ++ + +
Sbjct: 595 IIKGWLGKGEWDKAWQVFEEMIDKEVKPTVVTFNSLIGFLCGKGDLDGAMGLLEDMIQKR 654
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQP 98
P+ T+ +L++ C Y A + M DM +G +P
Sbjct: 655 HRPNAVTYALLMEGLCSLGKYKEAKKMMFDMDYQGCKP 692
Score = 37.0 bits (84), Expect = 2.4, Method: Composition-based stats.
Identities = 25/112 (22%), Positives = 50/112 (44%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++S R G +++K L + + + K DVV N ++ C+ G V+ ++
Sbjct: 700 LMSDLGRRGRIDDSKTLLLEMKRRRFKPDVVTYNILINHLCKEGRALEAYKVLVEMQVGG 759
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGK 112
P+ T+ +++ FC+ + + + + M GH P E L+ L K
Sbjct: 760 CEPNAATYRMMVDGFCQVEDFEGGLKVLSAMLMCGHCPRLESFCDLVVGLLK 811
>gi|147742764|gb|ABQ50546.1| hypothetical protein [Brassica rapa]
Length = 650
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 30/119 (25%), Positives = 52/119 (43%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C+ G ++ + E K K +V NS++ ++C G + ++R +
Sbjct: 271 IIDNLCKDGRLDDALSFFSEMETKGIKANVFTYNSLIGSFCSFGRWDDGAQLLRDMITRK 330
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEA 119
I+P+ TF LI KE A +M +G +P +SLI+ L + EA
Sbjct: 331 ITPNVVTFSALIDSLVKEGKLTEAKDLYNEMITRGIEPNTITYNSLIYGLCNDKRLDEA 389
Score = 44.7 bits (104), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 31/155 (20%), Positives = 67/155 (43%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C +E Q+ +K D+ N ++ +C+ ++ M + RK+
Sbjct: 376 LIYGLCNDKRLDEANQMMDLMVSKGCDPDIWTYNILINGFCKAKQVDDGMRLFRKMSLRG 435
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ D T+ LI+ FC+ + ++A + +M +G P + L+ L EAL
Sbjct: 436 MIADTVTYSTLIQGFCQSRKLIVAKKVFQEMVSQGVHPGIMTYAILLDGLCDNGELEEAL 495
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLKDAY 155
+ + + K + ++ I+H + + + DA+
Sbjct: 496 GILDQMHKCKMELDIGIYNIIIHGMCNANKVDDAW 530
Score = 37.7 bits (86), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 25/107 (23%), Positives = 44/107 (41%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I + + G E K L + + + + + NS++ C ++ +M +
Sbjct: 341 LIDSLVKEGKLTEAKDLYNEMITRGIEPNTITYNSLIYGLCNDKRLDEANQMMDLMVSKG 400
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLI 107
PD T++ILI FCK K R M +G + S+LI
Sbjct: 401 CDPDIWTYNILINGFCKAKQVDDGMRLFRKMSLRGMIADTVTYSTLI 447
Score = 37.4 bits (85), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 23/99 (23%), Positives = 46/99 (46%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I +FC G +++ QL D + +VV ++++ + + G + + ++
Sbjct: 306 LIGSFCSFGRWDDGAQLLRDMITRKITPNVVTFSALIDSLVKEGKLTEAKDLYNEMITRG 365
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPE 99
I P+ T++ LI C +K A + M M KG P+
Sbjct: 366 IEPNTITYNSLIYGLCNDKRLDEANQMMDLMVSKGCDPD 404
>gi|15234349|ref|NP_194530.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75208278|sp|Q9SUD8.1|PP340_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g28010
gi|4455360|emb|CAB36770.1| putative protein [Arabidopsis thaliana]
gi|7269655|emb|CAB79603.1| putative protein [Arabidopsis thaliana]
gi|332660020|gb|AEE85420.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 704
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 37/159 (23%), Positives = 71/159 (44%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I AFC++G +E + + + D+V+ S++ +C G+++ + ++ E
Sbjct: 218 LIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALFDEVLERG 277
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
SP T++ LI+ FCK A M +G +P + LI L + EAL
Sbjct: 278 DSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEAL 337
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLKDAYIVVK 159
+ N++ + I++ L L+ DA +V+
Sbjct: 338 QLLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEIVE 376
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 26/107 (24%), Positives = 50/107 (46%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++S+ C+ G ++ +L + + + DVV N M+ + GD++S ++ +
Sbjct: 535 LLSSLCKEGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGDIKSAESLLVGMSRAG 594
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLI 107
+SPD T+ LI F K A M G +P+ +C S++
Sbjct: 595 LSPDLFTYSKLINRFLKLGYLDEAISFFDKMVDSGFEPDAHICDSVL 641
Score = 43.1 bits (100), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 31/124 (25%), Positives = 51/124 (41%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
MI FC++G K L + V N +L + C+ G ++ + ++
Sbjct: 500 MIDGFCKTGMLNVAKGLLCKMRVSELQPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDN 559
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
PD +F+I+I K A +V M R G P+ S LI K+ EA+
Sbjct: 560 NFPDVVSFNIMIDGSLKAGDIKSAESLLVGMSRAGLSPDLFTYSKLINRFLKLGYLDEAI 619
Query: 121 SVYN 124
S ++
Sbjct: 620 SFFD 623
Score = 38.1 bits (87), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 17/76 (22%), Positives = 37/76 (48%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I FC E+ +LA + + + +V ++ A+C+ G M+ M ++++ +
Sbjct: 183 VIRGFCEGKELEKALELANEMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMG 242
Query: 61 ISPDYNTFHILIKYFC 76
+ D + LI+ FC
Sbjct: 243 LEADLVVYTSLIRGFC 258
>gi|302775582|ref|XP_002971208.1| hypothetical protein SELMODRAFT_94745 [Selaginella moellendorffii]
gi|300161190|gb|EFJ27806.1| hypothetical protein SELMODRAFT_94745 [Selaginella moellendorffii]
Length = 599
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 30/129 (23%), Positives = 55/129 (42%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+IS C ++ + L D + K VV N+++ C+ G ++ V+ +
Sbjct: 296 LISGLCSIARVDDARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSG 355
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
SPD T++ L+ C+ A + DM +G P ++L+ L K EA
Sbjct: 356 QSPDVVTYNTLVHGHCRAGQTERARELLSDMVARGLAPNVVTYTALVSGLCKANRLPEAC 415
Query: 121 SVYNMLRYS 129
V+ ++ S
Sbjct: 416 GVFAQMKSS 424
Score = 43.9 bits (102), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 28/123 (22%), Positives = 53/123 (43%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C + F++ ++L D + V N M+ A C+ G +E +++K+ E
Sbjct: 51 LIHGLCMANSFDDARELFADMNRRGCPPSPVTYNVMIDASCKRGMLEEACDLIKKMIEDG 110
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
PD T++ ++ CK A +M R G P +++I L + +A
Sbjct: 111 HVPDVVTYNTVMDGLCKSSRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQAC 170
Query: 121 SVY 123
V+
Sbjct: 171 QVF 173
Score = 42.7 bits (99), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 21/99 (21%), Positives = 41/99 (41%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C++G +E +++ + DVV N+++ +CR G E ++ +
Sbjct: 331 LIHGLCKAGRIKEAREVLDAMVSSGQSPDVVTYNTLVHGHCRAGQTERARELLSDMVARG 390
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPE 99
++P+ T+ L+ CK A M G P
Sbjct: 391 LAPNVVTYTALVSGLCKANRLPEACGVFAQMKSSGCAPN 429
Score = 42.7 bits (99), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 32/150 (21%), Positives = 61/150 (40%), Gaps = 2/150 (1%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ CR+G E ++L D A+ +VV +++ C+ + V ++
Sbjct: 366 LVHGHCRAGQTERARELLSDMVARGLAPNVVTYTALVSGLCKANRLPEACGVFAQMKSSG 425
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+P+ T+ LI FC + +M G P+ + +L L K + AL
Sbjct: 426 CAPNLFTYTALILGFCSAGQVDGGLKLFGEMVCAGISPDHVVYGTLAAELCKSGRSARAL 485
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKL 150
+ R S RS +A +++ + G L
Sbjct: 486 EILREGRESLRS--EAWGDEVYRFAVDGLL 513
Score = 40.4 bits (93), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 30/143 (20%), Positives = 60/143 (41%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
MI A C+ G EE L DVV N+++ C++ +E + + +++ L
Sbjct: 86 MIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNTVMDGLCKSSRVEEALLLFNEMERLG 145
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+P+ + + +I C++ A + +M K P+ LI L K +EA
Sbjct: 146 CTPNRRSHNTIILGLCQQSKIDQACQVFHEMEAKDIPPDSWSYGILIDGLAKAGKLNEAY 205
Query: 121 SVYNMLRYSKRSMCKALHEKILH 143
++ + S + + ++H
Sbjct: 206 KLFQRMLDSGITPSAVTYNVVIH 228
>gi|449458524|ref|XP_004146997.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Cucumis sativus]
Length = 481
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 38/151 (25%), Positives = 74/151 (49%), Gaps = 4/151 (2%)
Query: 4 AFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISP 63
C+ G +E K++ + +A+ +V+ +S++ +C G +E + ++ + + P
Sbjct: 172 GLCKVGHEDEAKEIFEEMKAQGMIPNVISYSSLVHGFCCAGKLEESKRLFNEMVDQGVQP 231
Query: 64 DYNTFHILIKYFCKE-KMYML--AYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ F++LI CKE K+ L A + + M KG + E + LI K+ EA+
Sbjct: 232 NLVQFNVLIDILCKEGKIGDLSSARKLFLSMPSKGCEHNEISYTILINGYCKIWKVEEAM 291
Query: 121 SVYN-MLRYSKRSMCKALHEKILHILISGKL 150
++YN M + KR K + +L +GK+
Sbjct: 292 NLYNEMPQVGKRPNVKTYSTLLTGLLQTGKV 322
Score = 36.6 bits (83), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 29/136 (21%), Positives = 62/136 (45%), Gaps = 3/136 (2%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLN---SMLCAYCRTGDMESVMHVMRKLD 57
++ FC +G EE+K+L + + + ++V N +LC + GD+ S + +
Sbjct: 204 LVHGFCCAGKLEESKRLFNEMVDQGVQPNLVQFNVLIDILCKEGKIGDLSSARKLFLSMP 263
Query: 58 ELAISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHS 117
+ ++ ILI +CK A +M + G +P + S+L+ L +
Sbjct: 264 SKGCEHNEISYTILINGYCKIWKVEEAMNLYNEMPQVGKRPNVKTYSTLLTGLLQTGKVG 323
Query: 118 EALSVYNMLRYSKRSM 133
+A ++ +++ S S+
Sbjct: 324 DANKLFGVMKASGISV 339
Score = 36.2 bits (82), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 19/82 (23%), Positives = 39/82 (47%), Gaps = 3/82 (3%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMES---VMHVMRKLD 57
+I C++G E + + + +VV N M+ +CR ++ + M K++
Sbjct: 382 LIDGLCKAGKVEIAWEFFKQLSQEGLQPNVVTCNIMIHGFCRVEQVDKANILFEKMEKME 441
Query: 58 ELAISPDYNTFHILIKYFCKEK 79
E +PD T++ L++ FC+
Sbjct: 442 ENGCTPDIITYNTLLRGFCESN 463
>gi|414879860|tpg|DAA56991.1| TPA: hypothetical protein ZEAMMB73_837882 [Zea mays]
Length = 677
Score = 46.2 bits (108), Expect = 0.004, Method: Composition-based stats.
Identities = 29/132 (21%), Positives = 59/132 (44%), Gaps = 1/132 (0%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+++A R+G + E D++L ++++ R GD + + +L
Sbjct: 183 LLAALTRAGHLDHALTFLPLMEDDAVAPDLILFSNLIHLALRGGDAPKALALFSRLRAAG 242
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMV-DMHRKGHQPEEELCSSLIFHLGKMRAHSEA 119
I PD ++ + +CK + A R ++ DM G P+ E S ++ L + H A
Sbjct: 243 IRPDLKAYNAAVAAYCKSDLLRDAKRMLLHDMPADGVAPDAETYSPILAALARRGRHLAA 302
Query: 120 LSVYNMLRYSKR 131
+S+++ +R R
Sbjct: 303 VSLFSHMRAVAR 314
Score = 35.8 bits (81), Expect = 6.4, Method: Composition-based stats.
Identities = 27/128 (21%), Positives = 58/128 (45%), Gaps = 2/128 (1%)
Query: 2 ISAFCRSGCFEETKQ-LAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++A+C+S + K+ L D A D + +L A R G + + + + +A
Sbjct: 254 VAAYCKSDLLRDAKRMLLHDMPADGVAPDAETYSPILAALARRGRHLAAVSLFSHMRAVA 313
Query: 61 -ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEA 119
+ PD + F+I++ + + + A R M R G P ++++ G EA
Sbjct: 314 RVKPDISVFNIILNAYGQLDLAREADRLFWSMRRAGVPPSVVTYNTMLRVYGDAGLFGEA 373
Query: 120 LSVYNMLR 127
+ +++++R
Sbjct: 374 VHLFDLMR 381
>gi|357149641|ref|XP_003575182.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like [Brachypodium distachyon]
Length = 557
Score = 46.2 bits (108), Expect = 0.004, Method: Composition-based stats.
Identities = 28/99 (28%), Positives = 46/99 (46%), Gaps = 3/99 (3%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
M++ +C +G + ++L D + D Y L LC RTG+ V+ M +
Sbjct: 130 MVAGYCVTGQLDAARRLVADMPMEPDSYTYNTLIRGLCGRGRTGNALVVLDDMLRR---G 186
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPE 99
PD T+ IL++ CK Y A + + +M KG P+
Sbjct: 187 CVPDVVTYTILLEATCKRSGYKQAMKLLDEMRAKGCAPD 225
Score = 45.4 bits (106), Expect = 0.008, Method: Composition-based stats.
Identities = 20/98 (20%), Positives = 50/98 (51%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ A C+ +++ +L + AK D++ N ++ C+ G ++ + ++ L
Sbjct: 197 LLEATCKRSGYKQAMKLLDEMRAKGCAPDIITYNVVVNGICQEGRVDDAIEFLKSLPSHG 256
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQP 98
P+ +++I++K C + + A + M +M +KG+ P
Sbjct: 257 CEPNTVSYNIVLKGLCTAERWEDAEKLMAEMSQKGYPP 294
Score = 44.7 bits (104), Expect = 0.013, Method: Composition-based stats.
Identities = 31/127 (24%), Positives = 59/127 (46%), Gaps = 8/127 (6%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C SG E +++ E DV+ N+M+ YC TG +++ R + ++
Sbjct: 100 LIKKLCASGRTAEARRVLAACEP-----DVMAYNAMVAGYCVTGQLDA---ARRLVADMP 151
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ PD T++ LI+ C A + DM R+G P+ + L+ K + +A+
Sbjct: 152 MEPDSYTYNTLIRGLCGRGRTGNALVVLDDMLRRGCVPDVVTYTILLEATCKRSGYKQAM 211
Query: 121 SVYNMLR 127
+ + +R
Sbjct: 212 KLLDEMR 218
Score = 40.4 bits (93), Expect = 0.25, Method: Composition-based stats.
Identities = 22/99 (22%), Positives = 49/99 (49%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ C + +E+ ++L + K +VV N ++ CR G +E M V+ ++ +
Sbjct: 267 VLKGLCTAERWEDAEKLMAEMSQKGYPPNVVTFNMLISFLCRRGLVEPAMEVLDQIPKYG 326
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPE 99
+P+ +++ ++ FCK+K A + M +G P+
Sbjct: 327 CTPNSLSYNPILHAFCKQKKMDRAMAFVELMVSRGCYPD 365
Score = 37.0 bits (84), Expect = 2.6, Method: Composition-based stats.
Identities = 21/99 (21%), Positives = 47/99 (47%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ AFC+ + ++ D+V N++L A CR G++++ + ++ +L +
Sbjct: 337 ILHAFCKQKKMDRAMAFVELMVSRGCYPDIVSYNTLLTALCRGGEVDAAVELLHQLKDKG 396
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPE 99
+P +++ +I K A + +M KG QP+
Sbjct: 397 CTPVLISYNTVIDGLTKAGKTKEALELLNEMVTKGLQPD 435
Score = 36.6 bits (83), Expect = 3.7, Method: Composition-based stats.
Identities = 22/123 (17%), Positives = 53/123 (43%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+++A CR G + +L + K ++ N+++ + G + + ++ ++
Sbjct: 372 LLTALCRGGEVDAAVELLHQLKDKGCTPVLISYNTVIDGLTKAGKTKEALELLNEMVTKG 431
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ PD T+ + C+E A R + G +P L ++++ L K R A+
Sbjct: 432 LQPDIITYSTISSGLCREDRIEEAIRAFCKVQDMGIRPNTVLYNAILLGLCKRRETHNAI 491
Query: 121 SVY 123
++
Sbjct: 492 DLF 494
>gi|449444614|ref|XP_004140069.1| PREDICTED: pentatricopeptide repeat-containing protein At4g26680,
mitochondrial-like [Cucumis sativus]
gi|449528063|ref|XP_004171026.1| PREDICTED: pentatricopeptide repeat-containing protein At4g26680,
mitochondrial-like [Cucumis sativus]
Length = 536
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/134 (21%), Positives = 56/134 (41%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+++ FC+ G +E +L G+ + V N ++ Y + G+ E + ++
Sbjct: 314 LVNGFCKVGKLQEASKLFGEMKGMSLSPTTVTYNILINGYSKAGNCEMGNRLFEEMSRFQ 373
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ D T++ LI CKE A + ++ KG P S+LI+ + A
Sbjct: 374 VKADILTYNALILGLCKEGKTKKAAYLVRELDEKGLVPNASTFSALIYGQCVQKQSERAF 433
Query: 121 SVYNMLRYSKRSMC 134
+Y + S + C
Sbjct: 434 QIYKSMIKSSFTPC 447
Score = 43.9 bits (102), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 21/93 (22%), Positives = 43/93 (46%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ +C G +L E DVV N+++ +C+ G ++ + ++ ++
Sbjct: 279 LIAGYCNKGLLSSAMKLRSVMEKNGVPPDVVTFNTLVNGFCKVGKLQEASKLFGEMKGMS 338
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHR 93
+SP T++ILI + K + R +M R
Sbjct: 339 LSPTTVTYNILINGYSKAGNCEMGNRLFEEMSR 371
Score = 39.7 bits (91), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 25/116 (21%), Positives = 54/116 (46%), Gaps = 4/116 (3%)
Query: 33 LNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYMLAYRTMVDMH 92
LN ++CA C+ G ++ V ++ + SP+ +++ LI +C + + A + M
Sbjct: 241 LNLVICACCKLGRLDKANVVFEEMGTMGFSPNVASYNTLIAGYCNKGLLSSAMKLRSVME 300
Query: 93 RKGHQPEEELCSSLIFHLGKMRAHSEALSVYNMLRYSKRSMCKALHEKILHILISG 148
+ G P+ ++L+ K+ EA ++ + + M + +ILI+G
Sbjct: 301 KNGVPPDVVTFNTLVNGFCKVGKLQEASKLFGEM----KGMSLSPTTVTYNILING 352
Score = 39.7 bits (91), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 31/130 (23%), Positives = 54/130 (41%), Gaps = 1/130 (0%)
Query: 29 DVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYMLAYRTM 88
+V N+++ YC G + S M + +++ + PD TF+ L+ FCK A +
Sbjct: 272 NVASYNTLIAGYCNKGLLSSAMKLRSVMEKNGVPPDVVTFNTLVNGFCKVGKLQEASKLF 331
Query: 89 VDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVY-NMLRYSKRSMCKALHEKILHILIS 147
+M P + LI K ++ M R+ ++ + IL +
Sbjct: 332 GEMKGMSLSPTTVTYNILINGYSKAGNCEMGNRLFEEMSRFQVKADILTYNALILGLCKE 391
Query: 148 GKLLKDAYIV 157
GK K AY+V
Sbjct: 392 GKTKKAAYLV 401
>gi|356522850|ref|XP_003530056.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
mitochondrial-like [Glycine max]
Length = 545
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/100 (25%), Positives = 45/100 (45%), Gaps = 1/100 (1%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C+SG L + + +V+ NS++ C+ G ++ + ++ K+ +
Sbjct: 376 LIDGLCKSGRISYAWDLIDEMHDRGHHANVITYNSLINGLCKNGQLDKAIALINKMKDQG 435
Query: 61 ISPDYNTFHILI-KYFCKEKMYMLAYRTMVDMHRKGHQPE 99
I PD T +IL+ CK K A D+ KG+ P
Sbjct: 436 IQPDMYTLNILLHGLLCKGKRLKNAQGLFQDLLDKGYHPN 475
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 43/78 (55%)
Query: 30 VVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYMLAYRTMV 89
++ N +L ++ + +V+ + R+L+ AI PD+ T +ILI FC LA+ +
Sbjct: 63 IIQFNKILDSFAKMKHYPTVVSLSRRLELKAIQPDFFTLNILINCFCHLGQINLAFSVLS 122
Query: 90 DMHRKGHQPEEELCSSLI 107
+ + G+QP+ ++LI
Sbjct: 123 KILKWGYQPDTVTLTTLI 140
Score = 39.3 bits (90), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 32/127 (25%), Positives = 60/127 (47%), Gaps = 1/127 (0%)
Query: 29 DVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYMLAYRTM 88
DV N M+ C+ +E +++ +++ + + P+ T++ LI CK A+ +
Sbjct: 334 DVWSYNIMINRLCKIKRVEEALNLYKEMHQKNMVPNTVTYNSLIDGLCKSGRISYAWDLI 393
Query: 89 VDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVYNMLRYSKRSMCKALHEKILH-ILIS 147
+MH +GH +SLI L K +A+++ N ++ +LH +L
Sbjct: 394 DEMHDRGHHANVITYNSLINGLCKNGQLDKAIALINKMKDQGIQPDMYTLNILLHGLLCK 453
Query: 148 GKLLKDA 154
GK LK+A
Sbjct: 454 GKRLKNA 460
Score = 38.1 bits (87), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 25/107 (23%), Positives = 47/107 (43%), Gaps = 8/107 (7%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ A + G +E K + K +V+ N+++ Y + HV + +
Sbjct: 279 LVDALHKEGKVKEAKNVLAVIVKTCLKPNVITYNTLIDGYAK--------HVFNAVGLMG 330
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLI 107
++PD +++I+I CK K A +MH+K P +SLI
Sbjct: 331 VTPDVWSYNIMINRLCKIKRVEEALNLYKEMHQKNMVPNTVTYNSLI 377
>gi|242064536|ref|XP_002453557.1| hypothetical protein SORBIDRAFT_04g008050 [Sorghum bicolor]
gi|241933388|gb|EES06533.1| hypothetical protein SORBIDRAFT_04g008050 [Sorghum bicolor]
Length = 390
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 47/99 (47%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
MIS+F R G ++ +L + + K DV+ NSM+ + GD++ + + + E
Sbjct: 223 MISSFGRVGLVDKASELFEEMDDSSCKPDVITYNSMINCLGKNGDLDEAHMLFKDMQEKG 282
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPE 99
PD T+ ILI+ F K +A +M +G P
Sbjct: 283 YDPDVFTYSILIECFGKSNKVDMACSLFDEMIAQGCVPN 321
Score = 38.1 bits (87), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 25/96 (26%), Positives = 44/96 (45%)
Query: 29 DVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYMLAYRTM 88
DV N M+ ++ R G ++ + ++D+ + PD T++ +I K A+
Sbjct: 216 DVFTYNIMISSFGRVGLVDKASELFEEMDDSSCKPDVITYNSMINCLGKNGDLDEAHMLF 275
Query: 89 VDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVYN 124
DM KG+ P+ S LI GK A S+++
Sbjct: 276 KDMQEKGYDPDVFTYSILIECFGKSNKVDMACSLFD 311
>gi|297744958|emb|CBI38550.3| unnamed protein product [Vitis vinifera]
Length = 795
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/111 (26%), Positives = 52/111 (46%), Gaps = 3/111 (2%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMES-VMHVMRKLDEL 59
M+ F ++G + +A + K +DVV N ++ + G ES H + +L
Sbjct: 373 MMDGFFKAGKESDAFNIAQEMTEKSSGFDVVAYNVLINGLFKLGKYESESFHT--GMRQL 430
Query: 60 AISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHL 110
++PD TF+ +I +CKE A + + +M G +P C+ L+ L
Sbjct: 431 GLAPDSATFNTMINAYCKEGNLGNALKLLNEMKSYGLKPNSITCNILVQRL 481
Score = 44.7 bits (104), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 18/79 (22%), Positives = 41/79 (51%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I +CR+G +L + + D+V N+++ +C+ GD+ + +M ++ +
Sbjct: 23 LIDGYCRNGEISRAVELLEGMKTEGPAPDIVTYNTLMNGFCKIGDLFTAKKLMGEISLVN 82
Query: 61 ISPDYNTFHILIKYFCKEK 79
+ P+ T+ LI +CK +
Sbjct: 83 LEPNVITYTTLIDAYCKSQ 101
Score = 43.5 bits (101), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 21/78 (26%), Positives = 40/78 (51%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I A+C+S C E+ + + K DVV ++ C++G +E V R+++E+
Sbjct: 93 LIDAYCKSQCLEDALYMYDEMTVKSLVPDVVTYTCIMNGLCKSGKVEEAKSVFREMEEVG 152
Query: 61 ISPDYNTFHILIKYFCKE 78
+ P+ ++ LI KE
Sbjct: 153 VVPNRFSYATLIDSLFKE 170
Score = 42.7 bits (99), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 27/123 (21%), Positives = 52/123 (42%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+IS FCR G + D K D++ N+++ YC + ++ V ++
Sbjct: 547 LISTFCRLGMIRRATLVFKDMMGKGILADIITYNALIHGYCISSHLKKAFAVHSQMLTEG 606
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+SP+ T++IL+ ++ A + M +G P L+ GK+ E +
Sbjct: 607 VSPNVETYNILLGGLSAARLIKEAAGLVNQMKERGLVPNATTYDILVSGHGKIGNMKECV 666
Query: 121 SVY 123
+Y
Sbjct: 667 KLY 669
Score = 37.7 bits (86), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 26/120 (21%), Positives = 55/120 (45%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+++ FC+ G K+L G+ + +V+ +++ AYC++ +E +++ ++ +
Sbjct: 58 LMNGFCKIGDLFTAKKLMGEISLVNLEPNVITYTTLIDAYCKSQCLEDALYMYDEMTVKS 117
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ PD T+ ++ CK A +M G P ++LI L K +EA
Sbjct: 118 LVPDVVTYTCIMNGLCKSGKVEEAKSVFREMEEVGVVPNRFSYATLIDSLFKEGNVAEAF 177
Score = 35.8 bits (81), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 21/92 (22%), Positives = 43/92 (46%)
Query: 33 LNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYMLAYRTMVDMH 92
N ++ YCR G++ + ++ + +PD T++ L+ FCK A + M ++
Sbjct: 20 FNVLIDGYCRNGEISRAVELLEGMKTEGPAPDIVTYNTLMNGFCKIGDLFTAKKLMGEIS 79
Query: 93 RKGHQPEEELCSSLIFHLGKMRAHSEALSVYN 124
+P ++LI K + +AL +Y+
Sbjct: 80 LVNLEPNVITYTTLIDAYCKSQCLEDALYMYD 111
Score = 35.8 bits (81), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 16/70 (22%), Positives = 33/70 (47%)
Query: 29 DVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYMLAYRTM 88
D N+M+ AYC+ G++ + + ++ ++ + P+ T +IL++ C +
Sbjct: 435 DSATFNTMINAYCKEGNLGNALKLLNEMKSYGLKPNSITCNILVQRLCAAGEIEKTMDLL 494
Query: 89 VDMHRKGHQP 98
DM G P
Sbjct: 495 NDMLVMGFHP 504
>gi|225466900|ref|XP_002264269.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g36240-like [Vitis vinifera]
Length = 588
Score = 46.2 bits (108), Expect = 0.004, Method: Composition-based stats.
Identities = 36/127 (28%), Positives = 56/127 (44%), Gaps = 2/127 (1%)
Query: 2 ISAFCRSGCFEETKQLAGDFEAKYD-KYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++AFCR G E+ + D K V + N ++ Y + E VM V K+ +
Sbjct: 259 LNAFCRVGRLEDAEISFESMRRMIDGKPSVAMYNILINGYVNCREHEKVMTVYEKMIKDR 318
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ PD TF+ LI C+ + LA +M KG P ++LI + R E +
Sbjct: 319 VKPDVFTFNSLISSCCRNSQFGLALEMFKEMKDKGCSPNVVSFNTLIKGSFRERKFEEGI 378
Query: 121 SV-YNML 126
+ Y ML
Sbjct: 379 GMAYEML 385
>gi|255538538|ref|XP_002510334.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223551035|gb|EEF52521.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 947
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/119 (24%), Positives = 54/119 (45%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I +C+ G EE ++ E + + L NS++ ++ VM ++ ++
Sbjct: 540 LIDGYCKLGNVEEAFKVKEKMEKEAILPSIELYNSLIGGLFKSKKTREVMDLLSEMCLKG 599
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEA 119
+SP+ T+ LI +C E A+ DM KG P +CS ++ L ++ EA
Sbjct: 600 LSPNVVTYGTLIAGWCDEGRLDKAFTAYFDMIEKGFAPNVIICSKIVSSLYRLGRIDEA 658
Score = 43.5 bits (101), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 25/126 (19%), Positives = 62/126 (49%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I +CR ++ +L + + ++ + N+++ YC+ G + ++ ++ +
Sbjct: 330 LIDGYCRVCKMDDAVRLRDEMLNVGLRMNLFICNALINGYCKNGQVSEAERLLMRMVDWD 389
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ P+ ++ L+ FC+E + A +M R G Q +SL+ L ++ A +AL
Sbjct: 390 LEPESYSYSTLMDGFCREGLVTKAISVYNEMLRVGIQSNVVTHNSLLKGLCRVGAFEDAL 449
Query: 121 SVYNML 126
V++++
Sbjct: 450 HVWHLM 455
Score = 43.5 bits (101), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 21/78 (26%), Positives = 39/78 (50%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ C+SG + ++L K +V+ N ++ YC+ G+ + + K+ +
Sbjct: 785 LINGLCKSGNLDRAQKLFDKLHLKGLAPNVISYNILIDGYCKNGNTREALDLRNKMLKEG 844
Query: 61 ISPDYNTFHILIKYFCKE 78
ISP T+ LI FCK+
Sbjct: 845 ISPSLITYSALIYGFCKQ 862
Score = 41.6 bits (96), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 29/114 (25%), Positives = 46/114 (40%)
Query: 9 GCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTF 68
G F L D A+ N+M+ +C+ M ++ EL PD T+
Sbjct: 478 GEFFRALALWNDILARGYGRSTYAFNTMINGFCKMEKMIEAEETFNRMKELGFEPDGVTY 537
Query: 69 HILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSV 122
LI +CK A++ M ++ P EL +SLI L K + E + +
Sbjct: 538 RTLIDGYCKLGNVEEAFKVKEKMEKEAILPSIELYNSLIGGLFKSKKTREVMDL 591
Score = 41.6 bits (96), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 28/127 (22%), Positives = 54/127 (42%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ FCR G + + + + +VV NS+L CR G E +HV + +
Sbjct: 400 LMDGFCREGLVTKAISVYNEMLRVGIQSNVVTHNSLLKGLCRVGAFEDALHVWHLMLKRG 459
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
++PD ++ L+ K + A D+ +G+ +++I KM EA
Sbjct: 460 VTPDEVSYCTLLDLLFKMGEFFRALALWNDILARGYGRSTYAFNTMINGFCKMEKMIEAE 519
Query: 121 SVYNMLR 127
+N ++
Sbjct: 520 ETFNRMK 526
Score = 38.5 bits (88), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 48/97 (49%), Gaps = 8/97 (8%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYD----KYDVVLLNSMLCAYCRTGDMESVMHVMRKL 56
M++A+C+ G +A DF + D + +VV NS++ GDME V++ +
Sbjct: 224 MVNAYCKDGWV----NVAVDFVKEMDYLGFELNVVTYNSLIDGCVSIGDMERAEMVLKLM 279
Query: 57 DELAISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHR 93
E I + T +LIK +C++ A + + +M R
Sbjct: 280 GERGILRNKVTLTLLIKGYCRQCKLEEAEKVLREMER 316
Score = 38.5 bits (88), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 21/99 (21%), Positives = 49/99 (49%)
Query: 29 DVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYMLAYRTM 88
+++ N+++ C++G+++ + KL ++P+ +++ILI +CK A
Sbjct: 778 NIITYNALINGLCKSGNLDRAQKLFDKLHLKGLAPNVISYNILIDGYCKNGNTREALDLR 837
Query: 89 VDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVYNMLR 127
M ++G P S+LI+ K +A ++ + +R
Sbjct: 838 NKMLKEGISPSLITYSALIYGFCKQGDMGKATNLLDEMR 876
Score = 38.1 bits (87), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 28/127 (22%), Positives = 62/127 (48%), Gaps = 6/127 (4%)
Query: 1 MISAFCRSGCFEETKQL---AGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLD 57
+I+ +C++G E ++L D++ + + Y ++++ +CR G + + V ++
Sbjct: 365 LINGYCKNGQVSEAERLLMRMVDWDLEPESYSY---STLMDGFCREGLVTKAISVYNEML 421
Query: 58 ELAISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHS 117
+ I + T + L+K C+ + A M ++G P+E +L+ L KM
Sbjct: 422 RVGIQSNVVTHNSLLKGLCRVGAFEDALHVWHLMLKRGVTPDEVSYCTLLDLLFKMGEFF 481
Query: 118 EALSVYN 124
AL+++N
Sbjct: 482 RALALWN 488
>gi|449468059|ref|XP_004151739.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
mitochondrial-like [Cucumis sativus]
Length = 225
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 31/125 (24%), Positives = 58/125 (46%), Gaps = 6/125 (4%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYD---KYDVVLLNSMLCAYCRTGDMESVMHVMRKLD 57
+I C++G E +L FE Y + DVV N M+ +C+ G ++ + K++
Sbjct: 92 LIDGLCKAGKLETAWEL---FEKLYQEGLQSDVVTYNIMIHGFCKVGQVDKANILFEKME 148
Query: 58 ELAISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHS 117
E +PD T++ L+ FC+ + + M ++ P+ C+ +I L K +
Sbjct: 149 ENGCTPDIITYNTLLCGFCQSNKSDEVVKLLHKMIQRDMSPDAISCNIVIDMLRKDEKYQ 208
Query: 118 EALSV 122
E L +
Sbjct: 209 ECLDL 213
Score = 42.0 bits (97), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 23/98 (23%), Positives = 42/98 (42%)
Query: 2 ISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAI 61
+ C++GC E + ++ K D+ N ++ C+ G +E+ + KL + +
Sbjct: 58 LDGLCKNGCLYEAMEHFNQLKSYNIKLDIESYNCLIDGLCKAGKLETAWELFEKLYQEGL 117
Query: 62 SPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPE 99
D T++I+I FCK A M G P+
Sbjct: 118 QSDVVTYNIMIHGFCKVGQVDKANILFEKMEENGCTPD 155
>gi|313851107|ref|NP_001186539.1| pentatricopeptide repeat protein [Zea mays]
gi|312064725|gb|ADQ27447.1| pentatricopeptide repeat protein [Zea mays]
gi|414872960|tpg|DAA51517.1| TPA: hypothetical protein ZEAMMB73_325693 [Zea mays]
Length = 489
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 33/135 (24%), Positives = 58/135 (42%), Gaps = 7/135 (5%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
M+ A C++G EE + D ++ + + + ++ Y +E + +++
Sbjct: 250 MVDALCKTGRVEEAVCVVQDMSSRGCQPTTFIYSILVHTYGVDMRIEDAVAAFLDMEKDG 309
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
I PD ++ LI FCK K + A+R M DM G P + ++ L + EA
Sbjct: 310 IMPDVVVYNALITAFCKVKKFENAFRVMDDMQGHGISPNSRTWNIILNTLISLGKDDEAY 369
Query: 121 SVYNMLRYSKRSMCK 135
V+ RSM K
Sbjct: 370 RVF-------RSMIK 377
Score = 41.6 bits (96), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 34/159 (21%), Positives = 69/159 (43%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ + R+ + +++ D A + D+V M+ A C+TG +E + V++ +
Sbjct: 215 LLEGWGRAPSLPKMREVYSDMLAAGCQPDIVTYGIMVDALCKTGRVEEAVCVVQDMSSRG 274
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
P + IL+ + + A +DM + G P+ + ++LI K++ A
Sbjct: 275 CQPTTFIYSILVHTYGVDMRIEDAVAAFLDMEKDGIMPDVVVYNALITAFCKVKKFENAF 334
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLKDAYIVVK 159
V + ++ S IL+ LIS +AY V +
Sbjct: 335 RVMDDMQGHGISPNSRTWNIILNTLISLGKDDEAYRVFR 373
>gi|225454948|ref|XP_002277434.1| PREDICTED: pentatricopeptide repeat-containing protein At5g14770,
mitochondrial-like [Vitis vinifera]
Length = 835
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 30/112 (26%), Positives = 53/112 (47%), Gaps = 5/112 (4%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTG--DMESVMHVMRKLDE 58
M+ F ++G + +A + K +DVV N ++ + G + ES MR +
Sbjct: 373 MMDGFFKAGKESDAFNIAQEMTEKSSGFDVVAYNVLINGLFKLGKYESESFHTGMR---Q 429
Query: 59 LAISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHL 110
L ++PD TF+ +I +CKE A + + +M G +P C+ L+ L
Sbjct: 430 LGLAPDSATFNTMINAYCKEGNLGNALKLLNEMKSYGLKPNSITCNILVQRL 481
Score = 44.7 bits (104), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 18/79 (22%), Positives = 41/79 (51%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I +CR+G +L + + D+V N+++ +C+ GD+ + +M ++ +
Sbjct: 23 LIDGYCRNGEISRAVELLEGMKTEGPAPDIVTYNTLMNGFCKIGDLFTAKKLMGEISLVN 82
Query: 61 ISPDYNTFHILIKYFCKEK 79
+ P+ T+ LI +CK +
Sbjct: 83 LEPNVITYTTLIDAYCKSQ 101
Score = 43.5 bits (101), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 21/78 (26%), Positives = 40/78 (51%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I A+C+S C E+ + + K DVV ++ C++G +E V R+++E+
Sbjct: 93 LIDAYCKSQCLEDALYMYDEMTVKSLVPDVVTYTCIMNGLCKSGKVEEAKSVFREMEEVG 152
Query: 61 ISPDYNTFHILIKYFCKE 78
+ P+ ++ LI KE
Sbjct: 153 VVPNRFSYATLIDSLFKE 170
Score = 42.7 bits (99), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 27/123 (21%), Positives = 52/123 (42%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+IS FCR G + D K D++ N+++ YC + ++ V ++
Sbjct: 547 LISTFCRLGMIRRATLVFKDMMGKGILADIITYNALIHGYCISSHLKKAFAVHSQMLTEG 606
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+SP+ T++IL+ ++ A + M +G P L+ GK+ E +
Sbjct: 607 VSPNVETYNILLGGLSAARLIKEAAGLVNQMKERGLVPNATTYDILVSGHGKIGNMKECV 666
Query: 121 SVY 123
+Y
Sbjct: 667 KLY 669
Score = 37.7 bits (86), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 26/120 (21%), Positives = 55/120 (45%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+++ FC+ G K+L G+ + +V+ +++ AYC++ +E +++ ++ +
Sbjct: 58 LMNGFCKIGDLFTAKKLMGEISLVNLEPNVITYTTLIDAYCKSQCLEDALYMYDEMTVKS 117
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ PD T+ ++ CK A +M G P ++LI L K +EA
Sbjct: 118 LVPDVVTYTCIMNGLCKSGKVEEAKSVFREMEEVGVVPNRFSYATLIDSLFKEGNVAEAF 177
Score = 35.8 bits (81), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 21/92 (22%), Positives = 43/92 (46%)
Query: 33 LNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYMLAYRTMVDMH 92
N ++ YCR G++ + ++ + +PD T++ L+ FCK A + M ++
Sbjct: 20 FNVLIDGYCRNGEISRAVELLEGMKTEGPAPDIVTYNTLMNGFCKIGDLFTAKKLMGEIS 79
Query: 93 RKGHQPEEELCSSLIFHLGKMRAHSEALSVYN 124
+P ++LI K + +AL +Y+
Sbjct: 80 LVNLEPNVITYTTLIDAYCKSQCLEDALYMYD 111
Score = 35.4 bits (80), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 16/70 (22%), Positives = 33/70 (47%)
Query: 29 DVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYMLAYRTM 88
D N+M+ AYC+ G++ + + ++ ++ + P+ T +IL++ C +
Sbjct: 435 DSATFNTMINAYCKEGNLGNALKLLNEMKSYGLKPNSITCNILVQRLCAAGEIEKTMDLL 494
Query: 89 VDMHRKGHQP 98
DM G P
Sbjct: 495 NDMLVMGFHP 504
>gi|449530367|ref|XP_004172167.1| PREDICTED: pentatricopeptide repeat-containing protein At5g04810,
chloroplastic-like, partial [Cucumis sativus]
Length = 564
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 29/147 (19%), Positives = 67/147 (45%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ A C+SG + + + A+ + + N ++ + R GD+ +M+++
Sbjct: 304 LLKACCKSGRMQSALAVTKEMSAQNIPRNTFIYNILIDGWARRGDVWEAADLMQQMKREG 363
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ PD +T+ I K A +T+ +M G +P + ++LI + +AL
Sbjct: 364 VQPDIHTYTSFINACSKAGDMQRATKTIEEMKSVGVKPNVKTYTTLINGWARASLPEKAL 423
Query: 121 SVYNMLRYSKRSMCKALHEKILHILIS 147
S + ++ S +A++ ++ L+S
Sbjct: 424 SCFEEMKLSGLKPDRAVYHCLMTSLLS 450
Score = 35.8 bits (81), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 24/129 (18%), Positives = 58/129 (44%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I+ + + G + +++ + E K+++ + ++ + + D + + L +
Sbjct: 94 LINLYAKLGKVSKALEVSKEMEHAGIKHNMKTYSMLINGFLKLKDWANAFAIFEDLIKDG 153
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
I PD ++ +I FC A T+ +M ++ H+P +I + +AL
Sbjct: 154 IKPDVVLYNNIITAFCGMGKMDRAVCTVKEMQKQRHKPTTRTFMPIIHGFARKGEMKKAL 213
Query: 121 SVYNMLRYS 129
V++M+R S
Sbjct: 214 DVFDMMRMS 222
Score = 35.8 bits (81), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 27/117 (23%), Positives = 52/117 (44%)
Query: 27 KYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYMLAYR 86
K DVVL N+++ A+C G M+ + ++++ + P TF +I F ++ A
Sbjct: 155 KPDVVLYNNIITAFCGMGKMDRAVCTVKEMQKQRHKPTTRTFMPIIHGFARKGEMKKALD 214
Query: 87 TMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVYNMLRYSKRSMCKALHEKILH 143
M G P ++LI L + R +A + + + + S + + I+H
Sbjct: 215 VFDMMRMSGCIPTVHTYNALILGLVEKRKMEKAEQILDEMTLAGVSPNEHTYTTIMH 271
>gi|212274769|ref|NP_001130292.1| uncharacterized protein LOC100191386 [Zea mays]
gi|194688764|gb|ACF78466.1| unknown [Zea mays]
Length = 510
Score = 46.2 bits (108), Expect = 0.005, Method: Composition-based stats.
Identities = 29/132 (21%), Positives = 59/132 (44%), Gaps = 1/132 (0%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+++A R+G + E D++L ++++ R GD + + +L
Sbjct: 16 LLAALTRAGHLDHALTFLPLMEDDAVAPDLILFSNLIHLALRGGDAPKALALFSRLRAAG 75
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMV-DMHRKGHQPEEELCSSLIFHLGKMRAHSEA 119
I PD ++ + +CK + A R ++ DM G P+ E S ++ L + H A
Sbjct: 76 IRPDLKAYNAAVAAYCKSDLLRDAKRMLLHDMPADGVAPDAETYSPILAALARRGRHLAA 135
Query: 120 LSVYNMLRYSKR 131
+S+++ +R R
Sbjct: 136 VSLFSHMRAVAR 147
Score = 35.4 bits (80), Expect = 7.0, Method: Composition-based stats.
Identities = 27/128 (21%), Positives = 58/128 (45%), Gaps = 2/128 (1%)
Query: 2 ISAFCRSGCFEETKQ-LAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++A+C+S + K+ L D A D + +L A R G + + + + +A
Sbjct: 87 VAAYCKSDLLRDAKRMLLHDMPADGVAPDAETYSPILAALARRGRHLAAVSLFSHMRAVA 146
Query: 61 -ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEA 119
+ PD + F+I++ + + + A R M R G P ++++ G EA
Sbjct: 147 RVKPDISVFNIILNAYGQLDLAREADRLFWSMRRAGVPPSVVTYNTMLRVYGDAGLFGEA 206
Query: 120 LSVYNMLR 127
+ +++++R
Sbjct: 207 VHLFDLMR 214
>gi|414871694|tpg|DAA50251.1| TPA: hypothetical protein ZEAMMB73_705675 [Zea mays]
Length = 1161
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 47/96 (48%), Gaps = 2/96 (2%)
Query: 1 MISAFCRSGCFEETKQ-LAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDEL 59
+I FC+ G + KQ L FE D DV+ ++++ CR M ++ ++ +
Sbjct: 441 LIDGFCQVGEISKAKQILKSMFEDGIDP-DVITYSALINGMCRMAKMHETKEILSRMQKS 499
Query: 60 AISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKG 95
I P+ + LI Y+CK A + VD++R+G
Sbjct: 500 GILPNDVLYTTLICYYCKAGYVKEALKHFVDIYRRG 535
Score = 37.7 bits (86), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 27/154 (17%), Positives = 62/154 (40%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+++ +C+ L D +++ + + ++ +C+ G++ +++ + E
Sbjct: 406 LLNGYCKVSMLGPAIYLMEDLKSRGITINKTMRTILIDGFCQVGEISKAKQILKSMFEDG 465
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
I PD T+ LI C+ + M + G P + L ++LI + K EAL
Sbjct: 466 IDPDVITYSALINGMCRMAKMHETKEILSRMQKSGILPNDVLYTTLICYYCKAGYVKEAL 525
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLKDA 154
+ + +H +LH ++ +A
Sbjct: 526 KHFVDIYRRGLVANPVIHNALLHAFYREGMITEA 559
Score = 37.4 bits (85), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 27/120 (22%), Positives = 53/120 (44%), Gaps = 3/120 (2%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ C+ G + +Q D N++L CR G ++ + + K+ +
Sbjct: 616 LLRGLCQGGHLVQARQFMSCLLDIPFAIDEKTFNALLLGICRYGTLDEALDLCEKMIKNN 675
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHL---GKMRAHS 117
PD +T+ IL+ FC++ + A + M KG P+ + L+ L G+++A S
Sbjct: 676 CLPDIHTYTILLSGFCRKGKILPALVILQMMLEKGVVPDTVAYTCLLNGLINEGQVKAAS 735
Score = 35.4 bits (80), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 30/131 (22%), Positives = 66/131 (50%), Gaps = 8/131 (6%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++++ C +G F + + + ++ + + V N++L Y + G ++ + V+ ++ +
Sbjct: 232 LLNSLCTNGEFRKAEDMLQKMKSCHIS-NSVTYNTILHWYVKKGRFKAALCVLEDMERDS 290
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLI---FHLGKMRAHS 117
+ D T++I+I C+ K A+ + M + P+E ++LI F GK+ +
Sbjct: 291 VQADVYTYNIMIDKLCRIKRSTRAFLLLKRMRKDDLTPDECTYNTLINGFFREGKI---N 347
Query: 118 EALSVYN-MLR 127
A V+N MLR
Sbjct: 348 HARYVFNHMLR 358
>gi|224087130|ref|XP_002308078.1| predicted protein [Populus trichocarpa]
gi|222854054|gb|EEE91601.1| predicted protein [Populus trichocarpa]
Length = 373
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 35/126 (27%), Positives = 59/126 (46%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+IS++CR+ FE +L + + K +VV N+++ + R E + ++ ++ +L
Sbjct: 116 LISSYCRNYMFELALELFREMKEKGCSPNVVSFNTLIKGFFRERKFEEGVKMVYEMIDLG 175
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
TF IL+ CKE A ++D RKG P + L+ L K R AL
Sbjct: 176 CEISSVTFEILVDGLCKEGQASEACGLLIDFTRKGVLPRKFDSFGLVDMLCKKRMADRAL 235
Query: 121 SVYNML 126
V + L
Sbjct: 236 EVLDEL 241
Score = 42.0 bits (97), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 27/98 (27%), Positives = 48/98 (48%), Gaps = 1/98 (1%)
Query: 30 VVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYMLAYRTMV 89
VV+ N ++ + G+ + + V ++ + + PD TF+ILI +C+ M+ LA
Sbjct: 75 VVVYNILINGCVKCGEHDRAIGVYDRMLKDRVKPDVFTFNILISSYCRNYMFELALELFR 134
Query: 90 DMHRKGHQPEEELCSSLIFHLGKMRAHSEALS-VYNML 126
+M KG P ++LI + R E + VY M+
Sbjct: 135 EMKEKGCSPNVVSFNTLIKGFFRERKFEEGVKMVYEMI 172
Score = 39.3 bits (90), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 44/93 (47%)
Query: 27 KYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYMLAYR 86
K DV N ++ +YCR E + + R++ E SP+ +F+ LIK F +E+ + +
Sbjct: 107 KPDVFTFNILISSYCRNYMFELALELFREMKEKGCSPNVVSFNTLIKGFFRERKFEEGVK 166
Query: 87 TMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEA 119
+ +M G + L+ L K SEA
Sbjct: 167 MVYEMIDLGCEISSVTFEILVDGLCKEGQASEA 199
>gi|326520353|dbj|BAK07435.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 652
Score = 46.2 bits (108), Expect = 0.005, Method: Composition-based stats.
Identities = 30/132 (22%), Positives = 60/132 (45%), Gaps = 1/132 (0%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+++A R+G + EA D+VL ++++ R GD + + +L
Sbjct: 160 LLAALTRAGHLDHALTFLPLMEADAVAPDLVLFSNLIHLALRAGDAPKALALFSRLRAAG 219
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMV-DMHRKGHQPEEELCSSLIFHLGKMRAHSEA 119
I PD ++ I +CK + A R ++ D+ G P+ E + ++ L + H A
Sbjct: 220 IRPDLKAYNAAIAAYCKSDLLRDAKRLLLHDVPADGVAPDAESYAPVLAALARRGRHLAA 279
Query: 120 LSVYNMLRYSKR 131
+S+++ +R R
Sbjct: 280 VSLFSHMRAVAR 291
>gi|22135795|gb|AAM91084.1| AT4g28010/T13J8_120 [Arabidopsis thaliana]
Length = 704
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 26/107 (24%), Positives = 50/107 (46%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++S+ C+ G ++ +L + + + DVV N M+ + GD++S ++ +
Sbjct: 535 LLSSLCKEGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGDIKSAESLLVGMSRAG 594
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLI 107
+SPD T+ LI F K A M G +P+ +C S++
Sbjct: 595 LSPDLFTYSKLINRFLKLGYLDEAISFFDKMVDSGFEPDAHICDSVL 641
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 37/159 (23%), Positives = 70/159 (44%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I AFC++G +E + + + D+V+ S++ +C G+++ + ++ E
Sbjct: 218 LIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALFDEVLERG 277
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
SP T++ LI+ FCK A M +G +P + LI L + EAL
Sbjct: 278 DSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEAL 337
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLKDAYIVVK 159
N++ + I++ L L+ DA +V+
Sbjct: 338 QPLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEIVE 376
Score = 43.1 bits (100), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 31/124 (25%), Positives = 51/124 (41%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
MI FC++G K L + V N +L + C+ G ++ + ++
Sbjct: 500 MIDGFCKTGMLNVAKGLLCKMRVSELQPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDN 559
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
PD +F+I+I K A +V M R G P+ S LI K+ EA+
Sbjct: 560 NFPDVVSFNIMIDGSLKAGDIKSAESLLVGMSRAGLSPDLFTYSKLINRFLKLGYLDEAI 619
Query: 121 SVYN 124
S ++
Sbjct: 620 SFFD 623
Score = 38.1 bits (87), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 17/76 (22%), Positives = 37/76 (48%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I FC E+ +LA + + + +V ++ A+C+ G M+ M ++++ +
Sbjct: 183 VIRGFCEGKELEKALELANEMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMG 242
Query: 61 ISPDYNTFHILIKYFC 76
+ D + LI+ FC
Sbjct: 243 LEADLVVYTSLIRGFC 258
>gi|449500717|ref|XP_004161177.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At1g02060, chloroplastic-like [Cucumis sativus]
Length = 720
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 48/100 (48%), Gaps = 1/100 (1%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRK-LDEL 59
++ F R+G F+E+ ++ ++ VV NS+L + G V + L
Sbjct: 155 LMRNFNRAGLFQESIKVFTIMKSHGVSPSVVTFNSLLTILLKRGRTNMAKKVYDEMLSTY 214
Query: 60 AISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPE 99
++PD TF+ILI+ FC M +R D+ R G +P+
Sbjct: 215 GVTPDTFTFNILIRGFCMNGMVDDGFRIFNDLSRFGCEPD 254
Score = 41.6 bits (96), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 21/82 (25%), Positives = 38/82 (46%), Gaps = 1/82 (1%)
Query: 1 MISAFCRSGCFEETKQ-LAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDEL 59
+I C + FE+ K L G D N+++ +C G+++ + V ++ EL
Sbjct: 333 LIKGLCEARKFEKIKDILEGTAGDGTFSPDTCTFNTLMHCHCHAGNLDDALKVFERMSEL 392
Query: 60 AISPDYNTFHILIKYFCKEKMY 81
I PD T+ L++ C+ Y
Sbjct: 393 KIQPDSATYSALVRSLCQGGHY 414
Score = 40.4 bits (93), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 37/129 (28%), Positives = 53/129 (41%), Gaps = 2/129 (1%)
Query: 30 VVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYMLAYRTMV 89
V N + C TG + R+L + D ++ LI CKE + Y +V
Sbjct: 440 VAAYNPIFKYLCETGKTKKAEKAFRQLMRRG-TQDPPSYKTLIMGHCKEGTFESGYELLV 498
Query: 90 DMHRKGHQPEEELCSSLIFHLGKMRAHSEAL-SVYNMLRYSKRSMCKALHEKILHILISG 148
M RK P+ E SLI L M AL S+ MLR S R H + +L G
Sbjct: 499 LMLRKDFXPDFETYESLINGLLHMDKPLLALQSLEKMLRSSHRPNSSTFHSILAKLLEQG 558
Query: 149 KLLKDAYIV 157
+ + A ++
Sbjct: 559 RASESASLI 567
Score = 37.7 bits (86), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 25/116 (21%), Positives = 56/116 (48%), Gaps = 2/116 (1%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I FC +G ++ ++ D + DVV N+++ CR G + +V++ + + +
Sbjct: 226 LIRGFCMNGMVDDGFRIFNDLSRFGCEPDVVTYNTLVDGLCRAGKVTVAYNVVKGMGKKS 285
Query: 61 I--SPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMR 114
+ +P+ T+ LI+ +C ++ A +M +G + ++LI L + R
Sbjct: 286 VDLNPNVVTYTTLIRGYCAKREIEKALAVFEEMVNQGLKANNITYNTLIKGLCEAR 341
>gi|255555231|ref|XP_002518652.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223542033|gb|EEF43577.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 827
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 31/154 (20%), Positives = 70/154 (45%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++S F ++G E ++ G+ A K ++ N+++ + G +M V +++
Sbjct: 399 LLSGFEKAGMDEPAMRIFGEMRAAGCKPNICTFNALIKMHGNRGRFAEMMKVFEEIEICN 458
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+PD T++ L+ F + M +M R G PE + ++LI + + +A+
Sbjct: 459 CAPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERDTFNTLISAYSRCGSFQQAM 518
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLKDA 154
+VY + + + + + +L L G L + +
Sbjct: 519 AVYKRMLEAGVTPDLSSYNAVLAALARGGLWEQS 552
Score = 40.8 bits (94), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 18/75 (24%), Positives = 39/75 (52%)
Query: 7 RSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYN 66
RS FE ++++ + AK K D++ N+++ AYCR G M+ + + + PD
Sbjct: 684 RSENFERSEEVLKEILAKGLKPDLISYNTVIFAYCRNGRMKDASRIFSYMKTYGLVPDVI 743
Query: 67 TFHILIKYFCKEKMY 81
T++ + + + ++
Sbjct: 744 TYNTFVASYAADSLF 758
Score = 40.4 bits (93), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 43/94 (45%)
Query: 30 VVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYMLAYRTMV 89
+V NS++ AY R G + M + ++ E I PD T+ L+ F K M A R
Sbjct: 358 IVTYNSLISAYARDGLLREAMELKDQMVEKGIKPDVFTYTTLLSGFEKAGMDEPAMRIFG 417
Query: 90 DMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVY 123
+M G +P ++LI G +E + V+
Sbjct: 418 EMRAAGCKPNICTFNALIKMHGNRGRFAEMMKVF 451
Score = 40.0 bits (92), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 22/93 (23%), Positives = 48/93 (51%), Gaps = 7/93 (7%)
Query: 8 SGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNT 67
SG F+E K+ AG F + D + N+++ AY R G + M V +++ E ++PD ++
Sbjct: 483 SGVFKEMKR-AG-FVPERDTF-----NTLISAYSRCGSFQQAMAVYKRMLEAGVTPDLSS 535
Query: 68 FHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEE 100
++ ++ + ++ + + +M +P E
Sbjct: 536 YNAVLAALARGGLWEQSEKVFAEMKDGRCKPNE 568
Score = 39.7 bits (91), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 29/132 (21%), Positives = 61/132 (46%), Gaps = 3/132 (2%)
Query: 6 CRSGC-FEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPD 64
CR G +EE Q+ + + D V N++L Y ++ + M V+++++ SP
Sbjct: 298 CRRGSLYEEAAQVFEEMKLSGFSPDKVTFNTLLDVYGKSRRPKEAMEVLKEMEFSGFSPS 357
Query: 65 YNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVYN 124
T++ LI + ++ + A M KG +P+ ++L+ K A+ ++
Sbjct: 358 IVTYNSLISAYARDGLLREAMELKDQMVEKGIKPDVFTYTTLLSGFEKAGMDEPAMRIFG 417
Query: 125 MLRYS--KRSMC 134
+R + K ++C
Sbjct: 418 EMRAAGCKPNIC 429
>gi|147841407|emb|CAN66681.1| hypothetical protein VITISV_005087 [Vitis vinifera]
Length = 882
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/112 (26%), Positives = 53/112 (47%), Gaps = 5/112 (4%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTG--DMESVMHVMRKLDE 58
M+ F ++G + +A + K +DVV N ++ + G + ES MR +
Sbjct: 373 MMDGFFKAGKESDAFNIAQEMTEKSSGFDVVAYNVLINGLFKLGKYESESFHTGMR---Q 429
Query: 59 LAISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHL 110
L ++PD TF+ +I +CKE A + + +M G +P C+ L+ L
Sbjct: 430 LGLAPDSATFNTMINAYCKEGNLGNALKLLNEMKSYGLKPNSITCNILVQRL 481
Score = 44.7 bits (104), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 18/79 (22%), Positives = 41/79 (51%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I +CR+G +L + + D+V N+++ +C+ GD+ + +M ++ +
Sbjct: 23 LIDGYCRNGEISRAVELLEGMKTEGPAPDIVTYNTLMNGFCKIGDLFTAKKLMGEISLVN 82
Query: 61 ISPDYNTFHILIKYFCKEK 79
+ P+ T+ LI +CK +
Sbjct: 83 LEPNVITYTTLIDAYCKSQ 101
Score = 43.5 bits (101), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 21/78 (26%), Positives = 40/78 (51%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I A+C+S C E+ + + K DVV ++ C++G +E V R+++E+
Sbjct: 93 LIDAYCKSQCLEDALYMYDEMTVKSLVPDVVTYTCIMNGLCKSGKVEEAKSVFREMEEVG 152
Query: 61 ISPDYNTFHILIKYFCKE 78
+ P+ ++ LI KE
Sbjct: 153 VVPNRFSYATLIDSLFKE 170
Score = 42.7 bits (99), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 27/123 (21%), Positives = 52/123 (42%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+IS FCR G + D K D++ N+++ YC + ++ V ++
Sbjct: 547 LISTFCRLGMIRRATLVFKDMMGKGILADIITYNALIHGYCISSHLKKAFAVHSQMLTEG 606
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+SP+ T++IL+ ++ A + M +G P L+ GK+ E +
Sbjct: 607 VSPNVETYNILLGGLSAARLIKEAAGLVNQMKERGLVPNATTYDILVSGHGKIGNMKECV 666
Query: 121 SVY 123
+Y
Sbjct: 667 KLY 669
Score = 37.7 bits (86), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 26/120 (21%), Positives = 55/120 (45%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+++ FC+ G K+L G+ + +V+ +++ AYC++ +E +++ ++ +
Sbjct: 58 LMNGFCKIGDLFTAKKLMGEISLVNLEPNVITYTTLIDAYCKSQCLEDALYMYDEMTVKS 117
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
+ PD T+ ++ CK A +M G P ++LI L K +EA
Sbjct: 118 LVPDVVTYTCIMNGLCKSGKVEEAKSVFREMEEVGVVPNRFSYATLIDSLFKEGNVAEAF 177
Score = 35.8 bits (81), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 21/92 (22%), Positives = 43/92 (46%)
Query: 33 LNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYMLAYRTMVDMH 92
N ++ YCR G++ + ++ + +PD T++ L+ FCK A + M ++
Sbjct: 20 FNVLIDGYCRNGEISRAVELLEGMKTEGPAPDIVTYNTLMNGFCKIGDLFTAKKLMGEIS 79
Query: 93 RKGHQPEEELCSSLIFHLGKMRAHSEALSVYN 124
+P ++LI K + +AL +Y+
Sbjct: 80 LVNLEPNVITYTTLIDAYCKSQCLEDALYMYD 111
>gi|222629056|gb|EEE61188.1| hypothetical protein OsJ_15186 [Oryza sativa Japonica Group]
Length = 897
Score = 46.2 bits (108), Expect = 0.005, Method: Composition-based stats.
Identities = 35/150 (23%), Positives = 74/150 (49%), Gaps = 8/150 (5%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I A + G +ET +L + + + D+VL N+++ ++ +G+++ +M ++++
Sbjct: 697 LIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKR 756
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
I+PD T++ L++ C A + + +M +G QP+ ++LI +S
Sbjct: 757 IAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTERGIQPDLVTYNTLI------SGYSMKG 810
Query: 121 SVYNMLRYSKRSMCKALHEKIL--HILISG 148
V + LR M K + +L + LI G
Sbjct: 811 DVKDALRIRNEMMNKGFNPTLLTYNALIQG 840
Score = 40.0 bits (92), Expect = 0.32, Method: Composition-based stats.
Identities = 28/112 (25%), Positives = 51/112 (45%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I++ SG + ++ G+ E K D V N+++ C G ++ ++ ++ E
Sbjct: 732 LINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTERG 791
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGK 112
I PD T++ LI + + A R +M KG P ++LI L K
Sbjct: 792 IQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCK 843
Score = 40.0 bits (92), Expect = 0.35, Method: Composition-based stats.
Identities = 23/107 (21%), Positives = 49/107 (45%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ C G +E ++L + + + D+V N+++ Y GD++ + + ++
Sbjct: 767 LMRGLCLLGRVDEARKLIDEMTERGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKG 826
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLI 107
+P T++ LI+ CK A + +M G P++ SLI
Sbjct: 827 FNPTLLTYNALIQGLCKNGQGDDAENMVKEMVENGITPDDSTYISLI 873
Score = 37.0 bits (84), Expect = 2.6, Method: Composition-based stats.
Identities = 21/81 (25%), Positives = 44/81 (54%), Gaps = 2/81 (2%)
Query: 29 DVVLLNSMLCAYCRTGDMESVMHVMRKLDEL-AISPDYNTFHILIKYFCKEKMYMLAYRT 87
+ V N+++ +C G +++ + +MR++ E I+P+ T+ +I +CK A +
Sbjct: 513 NAVTYNTVIAGFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKV 572
Query: 88 MVDMHRKGH-QPEEELCSSLI 107
+M KG +PE + ++LI
Sbjct: 573 FDEMLTKGEVKPEAVMYNALI 593
>gi|162460162|ref|NP_001106062.1| pentatricopeptide repeat 5 [Zea mays]
gi|154520281|gb|ABS82814.1| pentatricopeptide repeat protein 5 [Zea mays]
gi|413924537|gb|AFW64469.1| pentatricopeptide repeat 5 [Zea mays]
Length = 499
Score = 46.2 bits (108), Expect = 0.005, Method: Composition-based stats.
Identities = 29/122 (23%), Positives = 58/122 (47%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ AF ++G ++ L D + DV N +L AY + G ++ + V+ ++
Sbjct: 205 LLRAFAQAGDTKQVDMLFKDLDESVVSPDVYTYNGVLDAYGKNGMIKEMESVLVRMKSTQ 264
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
PD TF+ILI + +++ + + + R +P +S+I + G+ R +A
Sbjct: 265 CRPDVITFNILIDSYGRKQTFDKMEQVFKSLLRSKERPTHPTFNSMITNYGRARLREKAE 324
Query: 121 SV 122
SV
Sbjct: 325 SV 326
Score = 37.7 bits (86), Expect = 1.4, Method: Composition-based stats.
Identities = 26/101 (25%), Positives = 47/101 (46%)
Query: 30 VVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYMLAYRTMV 89
+V N +L A+ + GD + V + + LDE +SPD T++ ++ + K M +V
Sbjct: 199 IVTYNILLRAFAQAGDTKQVDMLFKDLDESVVSPDVYTYNGVLDAYGKNGMIKEMESVLV 258
Query: 90 DMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVYNMLRYSK 130
M +P+ + LI G+ + + V+ L SK
Sbjct: 259 RMKSTQCRPDVITFNILIDSYGRKQTFDKMEQVFKSLLRSK 299
Score = 36.2 bits (82), Expect = 4.1, Method: Composition-based stats.
Identities = 39/156 (25%), Positives = 66/156 (42%), Gaps = 12/156 (7%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I ++ R F++ +Q+ ++ NSM+ Y R E V+ K++EL
Sbjct: 275 LIDSYGRKQTFDKMEQVFKSLLRSKERPTHPTFNSMITNYGRARLREKAESVVEKMEELG 334
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLI-FHLGKMRAHSEA 119
P+Y T LI M A+ D K Q +EL +S HL + + EA
Sbjct: 335 FKPNYVTQECLI--------IMYAH---CDCVSKARQVFDELVTSQTKVHLSSLNSMLEA 383
Query: 120 LSVYNMLRYSKRSMCKALHEKILHILISGKLLKDAY 155
+ + + R + AL + ++ + KLL AY
Sbjct: 384 YCMNGLHTEADRLLDTALQQCVVPNGSTYKLLYKAY 419
>gi|38605763|emb|CAE05864.3| OSJNBa0044K18.6 [Oryza sativa Japonica Group]
Length = 902
Score = 46.2 bits (108), Expect = 0.005, Method: Composition-based stats.
Identities = 35/150 (23%), Positives = 74/150 (49%), Gaps = 8/150 (5%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I A + G +ET +L + + + D+VL N+++ ++ +G+++ +M ++++
Sbjct: 702 LIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKR 761
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
I+PD T++ L++ C A + + +M +G QP+ ++LI +S
Sbjct: 762 IAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTERGIQPDLVTYNTLI------SGYSMKG 815
Query: 121 SVYNMLRYSKRSMCKALHEKIL--HILISG 148
V + LR M K + +L + LI G
Sbjct: 816 DVKDALRIRNEMMNKGFNPTLLTYNALIQG 845
Score = 40.0 bits (92), Expect = 0.32, Method: Composition-based stats.
Identities = 28/112 (25%), Positives = 51/112 (45%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I++ SG + ++ G+ E K D V N+++ C G ++ ++ ++ E
Sbjct: 737 LINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTERG 796
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGK 112
I PD T++ LI + + A R +M KG P ++LI L K
Sbjct: 797 IQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCK 848
Score = 40.0 bits (92), Expect = 0.35, Method: Composition-based stats.
Identities = 23/107 (21%), Positives = 49/107 (45%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ C G +E ++L + + + D+V N+++ Y GD++ + + ++
Sbjct: 772 LMRGLCLLGRVDEARKLIDEMTERGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKG 831
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLI 107
+P T++ LI+ CK A + +M G P++ SLI
Sbjct: 832 FNPTLLTYNALIQGLCKNGQGDDAENMVKEMVENGITPDDSTYISLI 878
Score = 37.0 bits (84), Expect = 2.6, Method: Composition-based stats.
Identities = 21/81 (25%), Positives = 44/81 (54%), Gaps = 2/81 (2%)
Query: 29 DVVLLNSMLCAYCRTGDMESVMHVMRKLDEL-AISPDYNTFHILIKYFCKEKMYMLAYRT 87
+ V N+++ +C G +++ + +MR++ E I+P+ T+ +I +CK A +
Sbjct: 518 NAVTYNTVIAGFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKV 577
Query: 88 MVDMHRKGH-QPEEELCSSLI 107
+M KG +PE + ++LI
Sbjct: 578 FDEMLTKGEVKPEAVMYNALI 598
>gi|297832366|ref|XP_002884065.1| hypothetical protein ARALYDRAFT_343373 [Arabidopsis lyrata subsp.
lyrata]
gi|297329905|gb|EFH60324.1| hypothetical protein ARALYDRAFT_343373 [Arabidopsis lyrata subsp.
lyrata]
Length = 1056
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 41/91 (45%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ C G E ++ E+K K DVV N+++ YC G M ++++
Sbjct: 277 VMEVLCNEGRVSEALEVLERVESKGGKVDVVACNTLVKGYCAVGKMRVAQRFFQEMERKG 336
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDM 91
P+ T+++LI FC M A T DM
Sbjct: 337 YLPNVETYNLLIAGFCDVGMLDSALDTFNDM 367
Score = 38.9 bits (89), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 24/107 (22%), Positives = 47/107 (43%)
Query: 4 AFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISP 63
+ C G ++ K + V++ + ++ Y + G ME + ++ + P
Sbjct: 455 SLCEKGGMDDVKTAYDQMTGEGGVPSVIVSHCLIHRYSQEGYMEETLELINDMVTRGYLP 514
Query: 64 DYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHL 110
+TF+ +I FCKE M + + DM +G P+ E + L+ L
Sbjct: 515 RSSTFNAVIIGFCKEDKVMNGIKFVEDMAERGCVPDRESYNPLLEEL 561
Score = 37.4 bits (85), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 27/117 (23%), Positives = 51/117 (43%), Gaps = 7/117 (5%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ A C++G + L + + D V N ++ AYC + M ++ K L
Sbjct: 211 LLHALCKNGKVGRARSLMSEMKEPND----VTFNILISAYCNEQKLIQSMVLLEKCFSLG 266
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFH---LGKMR 114
+ PD T +++ C E A + + KG + + C++L+ +GKMR
Sbjct: 267 LVPDVVTVTKVMEVLCNEGRVSEALEVLERVESKGGKVDVVACNTLVKGYCAVGKMR 323
Score = 37.4 bits (85), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 23/99 (23%), Positives = 43/99 (43%)
Query: 29 DVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYMLAYRTM 88
DVV + ++ C G + + V+ +++ D + L+K +C +A R
Sbjct: 270 DVVTVTKVMEVLCNEGRVSEALEVLERVESKGGKVDVVACNTLVKGYCAVGKMRVAQRFF 329
Query: 89 VDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVYNMLR 127
+M RKG+ P E + LI + AL +N ++
Sbjct: 330 QEMERKGYLPNVETYNLLIAGFCDVGMLDSALDTFNDMK 368
>gi|224109914|ref|XP_002333182.1| predicted protein [Populus trichocarpa]
gi|222835036|gb|EEE73485.1| predicted protein [Populus trichocarpa]
Length = 319
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 23/96 (23%), Positives = 45/96 (46%)
Query: 4 AFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISP 63
+ G ++ +L + + Y D+V+ N ++ A C++G +E + KL + P
Sbjct: 154 GLSKQGYLDQALELFREMQNNYLNPDLVIYNILIDAMCKSGKLEDARELFLKLHVKGLLP 213
Query: 64 DYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPE 99
D ++ +I C+E + AY+ M R G P+
Sbjct: 214 DVRSWTSIISGLCREGLLDEAYKAFRQMERDGCPPD 249
Score = 39.7 bits (91), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 31/129 (24%), Positives = 55/129 (42%), Gaps = 3/129 (2%)
Query: 8 SGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNT 67
G +++ QL D A+ D+V + L + G ++ + + R++ ++PD
Sbjct: 123 GGFWKQKIQLFKDMHAQGCSPDLVTYSIFLHGLSKQGYLDQALELFREMQNNYLNPDLVI 182
Query: 68 FHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEALSVYNMLR 127
++ILI CK A + +H KG P+ +S+I L + EA Y R
Sbjct: 183 YNILIDAMCKSGKLEDARELFLKLHVKGLLPDVRSWTSIISGLCREGLLDEA---YKAFR 239
Query: 128 YSKRSMCKA 136
+R C
Sbjct: 240 QMERDGCPP 248
Score = 39.3 bits (90), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 21/95 (22%), Positives = 44/95 (46%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I A C+SG E+ ++L K DV S++ CR G ++ R+++
Sbjct: 186 LIDAMCKSGKLEDARELFLKLHVKGLLPDVRSWTSIISGLCREGLLDEAYKAFRQMERDG 245
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKG 95
PD +++++++ F + A + +M +G
Sbjct: 246 CPPDCCSYNVIVRGFLQNNGASRAEQLFQEMFDRG 280
>gi|356495784|ref|XP_003516753.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22670,
mitochondrial-like [Glycine max]
Length = 558
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 28/122 (22%), Positives = 52/122 (42%)
Query: 33 LNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYMLAYRTMVDMH 92
N ++ +CR D ++ M + E PD ++ I+ + E+ + + + +M
Sbjct: 268 FNVLMHGWCRARDFDNARKAMEDMKEHGFEPDVFSYTNFIEAYGHERDFRKVDQVLEEMR 327
Query: 93 RKGHQPEEELCSSLIFHLGKMRAHSEALSVYNMLRYSKRSMCKALHEKILHILISGKLLK 152
G P +S++ HLGK +AL VY ++ + ++ IL LK
Sbjct: 328 ENGCPPNAVTYTSVMLHLGKAGQLRKALEVYEKMKSDGCVADTPFYSSMIFILGKAGRLK 387
Query: 153 DA 154
DA
Sbjct: 388 DA 389
>gi|255546465|ref|XP_002514292.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223546748|gb|EEF48246.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 608
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 25/97 (25%), Positives = 45/97 (46%)
Query: 4 AFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISP 63
+ R+G E + + + +VV+ +++ +C G ME+ V K+ E+ ISP
Sbjct: 383 GYVRAGETENAESVLTSMAKSGVRPNVVICTTIISGWCSAGKMENAKMVYEKMCEIGISP 442
Query: 64 DYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEE 100
+ TF LI + + + A + M KG PE+
Sbjct: 443 NLKTFETLIWGYAEARQPGKAEELLQLMEEKGVFPEK 479
Score = 42.0 bits (97), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 19/81 (23%), Positives = 39/81 (48%)
Query: 27 KYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYMLAYR 86
K DV+ ++++ A+ G M+ + + + I PD + F IL K + + A
Sbjct: 336 KPDVITFSTIMNAWSSAGLMDKCQEIFNDMAKAGIEPDIHAFSILAKGYVRAGETENAES 395
Query: 87 TMVDMHRKGHQPEEELCSSLI 107
+ M + G +P +C+++I
Sbjct: 396 VLTSMAKSGVRPNVVICTTII 416
Score = 40.4 bits (93), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 20/75 (26%), Positives = 39/75 (52%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+++A + FE L E K D +L N+M+ A+ +G+++ M + +K+ +
Sbjct: 99 LVAALTKLKHFESIFLLISKVEENGMKPDSILYNAMINAFSESGNVKEAMKIFQKMKDTG 158
Query: 61 ISPDYNTFHILIKYF 75
P +TF+ LIK +
Sbjct: 159 CKPTTSTFNTLIKGY 173
Score = 40.4 bits (93), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 27/102 (26%), Positives = 50/102 (49%), Gaps = 5/102 (4%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMES---VMHVMRKLD 57
MI+AF SG +E ++ + K N+++ Y G E ++H+M LD
Sbjct: 134 MINAFSESGNVKEAMKIFQKMKDTGCKPTTSTFNTLIKGYGNAGKPEEGLKMLHLM-SLD 192
Query: 58 ELAISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPE 99
++ P+ T++IL++ +C +K A+ + M G QP+
Sbjct: 193 G-SVKPNDRTYNILVRAWCSKKNIEEAWNVLHKMVASGIQPD 233
Score = 37.7 bits (86), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 24/93 (25%), Positives = 45/93 (48%), Gaps = 1/93 (1%)
Query: 34 NSMLCAYCRTGDMESVMHVMRKLDELAISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHR 93
N ++ A+C ++E +V+ K+ I PD T++IL + + ++ + A +++M
Sbjct: 203 NILVRAWCSKKNIEEAWNVLHKMVASGIQPDVVTYNILARAYAQKGETLRAEDLILEMQY 262
Query: 94 KGHQPEEELCSSLIFHLGKMRAHSEALS-VYNM 125
+ P E C ++ K EAL VY M
Sbjct: 263 EKVAPNERTCGIIVNGYCKEGNMIEALRFVYRM 295
Score = 37.4 bits (85), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 26/107 (24%), Positives = 48/107 (44%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
++ A+C EE + A + DVV N + AY + G+ ++ ++
Sbjct: 205 LVRAWCSKKNIEEAWNVLHKMVASGIQPDVVTYNILARAYAQKGETLRAEDLILEMQYEK 264
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLI 107
++P+ T I++ +CKE + A R + M G P + +SLI
Sbjct: 265 VAPNERTCGIIVNGYCKEGNMIEALRFVYRMKELGVHPNLVIFNSLI 311
>gi|255564599|ref|XP_002523294.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223537382|gb|EEF39010.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 544
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 35/154 (22%), Positives = 67/154 (43%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I A C+ E ++ + A +VV ++L Y GDM + V +L +
Sbjct: 207 LIKALCKKNDVESAVKVLDEMPAMGMIPNVVTYTTILGGYSSRGDMVNANKVFGELFDRG 266
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
PD T+ IL+ +C++ A + M DM G +P E ++ K + EA
Sbjct: 267 WLPDATTYTILMNGYCEQGRLADAIKLMDDMGENGVEPNEVTYGVMVEAYCKEKKAGEAR 326
Query: 121 SVYNMLRYSKRSMCKALHEKILHILISGKLLKDA 154
++ + + + AL K++ +L +++A
Sbjct: 327 NLLDDMLERQYVPSSALCCKVIDVLCEAGKIEEA 360
Score = 38.9 bits (89), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 30/125 (24%), Positives = 54/125 (43%), Gaps = 1/125 (0%)
Query: 1 MISAFCRSGCFEETKQLAGDFEAKYDKYDVVLLNSMLCAYCRTGDMESVMHVMRKLDELA 60
+I C+ G E ++L G+FE + ++ N+++ C G++ + + E
Sbjct: 382 LIHWLCKEGKVWEARKLFGEFE-RGAIPSLLTYNTLIAGMCEKGELSEAGKLWDDMMEKG 440
Query: 61 ISPDYNTFHILIKYFCKEKMYMLAYRTMVDMHRKGHQPEEELCSSLIFHLGKMRAHSEAL 120
P+ T+++LIK F K R + +M P + + LI L KM E
Sbjct: 441 YKPNAFTYNMLIKGFSKIGNAKEGIRILEEMLDNRCMPNKSTYAILIEELCKMGMEGEVD 500
Query: 121 SVYNM 125
V +M
Sbjct: 501 KVVSM 505
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.327 0.137 0.413
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 2,324,620,208
Number of Sequences: 23463169
Number of extensions: 81721128
Number of successful extensions: 259211
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 3392
Number of HSP's successfully gapped in prelim test: 707
Number of HSP's that attempted gapping in prelim test: 231893
Number of HSP's gapped (non-prelim): 25425
length of query: 159
length of database: 8,064,228,071
effective HSP length: 121
effective length of query: 38
effective length of database: 9,520,151,918
effective search space: 361765772884
effective search space used: 361765772884
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.7 bits)
S2: 71 (32.0 bits)