Query 039638
Match_columns 283
No_of_seqs 274 out of 1542
Neff 6.0
Searched_HMMs 29240
Date Mon Mar 25 20:11:24 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/039638.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/039638hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3ceg_A Baculoviral IAP repeat- 100.0 8.7E-48 3E-52 360.7 18.6 219 11-241 39-279 (323)
2 2pwq_A Ubiquitin conjugating e 100.0 1.9E-42 6.6E-47 309.0 12.9 182 36-241 17-206 (216)
3 1yh2_A HSPC150 protein similar 100.0 2.2E-41 7.4E-46 291.5 15.3 162 40-221 2-166 (169)
4 2ayv_A Ubiquitin-conjugating e 100.0 2.9E-41 1E-45 290.2 14.0 147 37-203 16-165 (166)
5 3h8k_A Ubiquitin-conjugating e 100.0 5.5E-41 1.9E-45 287.2 15.6 155 41-203 2-161 (164)
6 2ucz_A UBC7, ubiquitin conjuga 100.0 7.9E-41 2.7E-45 286.7 15.8 157 41-204 3-163 (165)
7 4gpr_A Ubiquitin-conjugating e 100.0 6E-41 2.1E-45 283.7 14.6 145 40-204 2-149 (151)
8 1zdn_A Ubiquitin-conjugating e 100.0 4.1E-41 1.4E-45 286.8 13.3 149 35-203 6-157 (158)
9 2c4o_A Ubiquitin-conjugating e 100.0 6.9E-41 2.4E-45 287.6 14.0 149 36-204 13-164 (165)
10 2c2v_B Ubiquitin-conjugating e 100.0 5.2E-41 1.8E-45 285.1 11.8 143 42-204 5-150 (154)
11 2awf_A Ubiquitin-conjugating e 100.0 1.8E-40 6.3E-45 286.7 14.5 153 39-198 14-171 (172)
12 1z2u_A Ubiquitin-conjugating e 100.0 1.6E-40 5.4E-45 280.7 13.4 145 40-204 2-149 (150)
13 2r0j_A Ubiquitin carrier prote 100.0 1.5E-40 5.1E-45 280.7 12.5 141 44-204 3-146 (149)
14 2e2c_A Ubiquitin conjugating e 100.0 3.9E-40 1.3E-44 280.1 14.8 144 40-204 7-153 (156)
15 1jat_A Ubiquitin-conjugating e 100.0 2.4E-40 8.3E-45 281.1 13.0 143 42-204 5-150 (155)
16 1ayz_A UBC2, ubiquitin-conjuga 100.0 2.6E-40 8.8E-45 285.1 13.3 144 41-204 3-149 (169)
17 3k9o_A Ubiquitin-conjugating e 100.0 3.4E-40 1.2E-44 291.2 14.2 174 41-238 4-189 (201)
18 2aak_A UBC1, ubiquitin conjuga 100.0 6.4E-40 2.2E-44 277.6 13.4 144 41-204 3-149 (152)
19 1fxt_A Ubiquitin-conjugating e 100.0 2E-40 6.7E-45 279.9 9.5 142 43-204 2-148 (149)
20 3rz3_A Ubiquitin-conjugating e 100.0 5.6E-39 1.9E-43 279.8 18.2 170 40-231 5-175 (183)
21 3rcz_B SUMO-conjugating enzyme 100.0 8.4E-40 2.9E-44 280.4 12.8 148 39-204 7-162 (163)
22 3e46_A Ubiquitin-conjugating e 100.0 2.4E-39 8.2E-44 295.1 16.0 176 39-238 54-241 (253)
23 3fn1_B NEDD8-conjugating enzym 100.0 3E-39 1E-43 277.3 13.9 155 35-204 7-166 (167)
24 3bzh_A Ubiquitin-conjugating e 100.0 3.3E-39 1.1E-43 283.9 14.3 144 41-204 47-193 (194)
25 2bep_A Ubiquitin-conjugating e 100.0 4.8E-39 1.6E-43 274.2 13.7 145 40-204 6-157 (159)
26 2gjd_A Ubiquitin-conjugating e 100.0 3.9E-39 1.3E-43 274.4 12.8 146 41-204 3-156 (157)
27 2f4z_A Tgtwinscan_2721 - E2 do 100.0 3.4E-39 1.2E-43 283.6 12.3 145 40-204 30-191 (193)
28 1i7k_A Ubiquitin-conjugating e 100.0 4.8E-39 1.6E-43 279.6 13.0 145 39-204 27-174 (179)
29 1yrv_A Ubiquitin-conjugating l 100.0 4.7E-39 1.6E-43 277.2 12.3 138 40-195 21-162 (169)
30 1tte_A Ubiquitin-conjugating e 100.0 2.3E-39 8E-44 288.9 10.1 143 42-204 2-149 (215)
31 2grr_A Ubiquitin-conjugating e 100.0 1.4E-38 4.8E-43 271.9 12.6 147 40-204 5-159 (161)
32 1wzv_A Ubiquitin-conjugating e 100.0 1.3E-38 4.6E-43 270.2 11.9 143 42-204 4-150 (155)
33 2h2y_A Ubiquitin-conjugating e 100.0 1.2E-37 4.2E-42 259.5 16.1 133 12-175 2-134 (136)
34 2fo3_A Ubiquitin-conjugating e 100.0 8.7E-38 3E-42 256.7 13.2 116 42-176 6-121 (125)
35 1y8x_A Ubiquitin-conjugating e 100.0 9.8E-38 3.4E-42 266.6 12.5 138 40-200 4-145 (160)
36 2a7l_A Hypothetical ubiquitin- 100.0 1.3E-37 4.5E-42 259.6 12.4 111 44-172 24-136 (136)
37 2y9m_A Ubiquitin-conjugating e 100.0 2.3E-37 8E-42 267.2 14.3 146 40-204 4-167 (172)
38 2nvu_C NEDD8-conjugating enzym 100.0 2.4E-37 8.2E-42 269.1 12.2 141 37-200 21-165 (180)
39 4ddg_A Ubiquitin-conjugating e 100.0 1.3E-36 4.6E-41 292.9 16.2 156 41-222 2-160 (399)
40 2onu_A Ubiquitin-conjugating e 100.0 8.4E-38 2.9E-42 265.0 6.8 139 43-204 3-146 (152)
41 1c4z_D UBCH7, ubiquitin conjug 100.0 5.7E-38 1.9E-42 266.1 5.0 115 43-177 3-118 (154)
42 2z5d_A Ubiquitin-conjugating e 100.0 2.7E-37 9.1E-42 268.6 8.8 140 41-204 24-168 (179)
43 2q0v_A Ubiquitin-conjugating e 100.0 5.4E-36 1.8E-40 255.1 14.7 133 35-188 14-156 (156)
44 3o2u_A NEDD8-conjugating enzym 100.0 2.3E-36 8E-41 264.9 11.9 142 36-200 23-174 (190)
45 2f4w_A Ubiquitin-conjugating e 100.0 9E-36 3.1E-40 260.6 15.3 123 37-178 9-131 (187)
46 2a4d_A Ubiquitin-conjugating e 100.0 2.6E-35 9E-40 251.9 15.1 125 38-180 21-151 (160)
47 2hlw_A Ubiquitin-conjugating e 100.0 4.1E-35 1.4E-39 252.9 13.6 144 16-180 11-161 (170)
48 1yf9_A Ubiquitin carrier prote 100.0 7.4E-36 2.5E-40 257.7 8.3 139 42-204 12-155 (171)
49 1jat_B Ubiquitin-conjugating e 100.0 7.9E-35 2.7E-39 242.9 11.4 122 41-183 5-136 (138)
50 4ds2_A Ubiquitin-conjugating e 100.0 2.8E-35 9.4E-40 252.9 7.5 136 42-197 8-163 (167)
51 1zuo_A Hypothetical protein LO 100.0 2.3E-34 7.7E-39 251.5 11.9 140 36-194 21-176 (186)
52 2z6o_A UFM1-conjugating enzyme 99.9 2.1E-25 7.3E-30 190.3 5.1 105 39-165 29-144 (172)
53 3r3q_A Suppressor protein STP2 99.7 1.5E-17 5E-22 142.2 9.6 113 45-177 31-160 (162)
54 3kpa_A Probable ubiquitin fold 99.6 1.4E-16 5E-21 133.4 5.6 88 39-133 31-128 (168)
55 3obq_A Tumor susceptibility ge 99.4 8.5E-13 2.9E-17 110.9 7.4 107 47-177 25-142 (146)
56 2ebm_A RWD domain-containing p 94.8 0.13 4.3E-06 40.8 8.2 68 43-112 11-78 (128)
57 2day_A Ring finger protein 25; 94.3 0.26 8.8E-06 38.9 9.0 68 46-113 12-83 (128)
58 2yz0_A Serine/threonine-protei 93.2 0.55 1.9E-05 37.5 9.3 69 43-113 11-86 (138)
59 1ukx_A GCN2, GCN2 EIF2alpha ki 92.4 0.71 2.4E-05 36.7 8.9 71 41-112 9-86 (137)
60 3zqs_A E3 ubiquitin-protein li 89.9 2.4 8.3E-05 36.4 10.2 85 45-173 4-88 (186)
61 2ebk_A RWD domain-containing p 87.7 1.2 4.2E-05 35.0 6.4 66 46-112 11-79 (128)
62 2daw_A RWD domain containing p 85.7 2.3 7.7E-05 34.9 7.2 70 40-113 12-99 (154)
63 2dax_A Protein C21ORF6; RWD do 81.5 0.94 3.2E-05 37.0 3.1 24 90-113 74-97 (152)
64 3c7l_A Regulator of G-protein 40.3 40 0.0014 26.2 5.0 58 214-271 33-90 (137)
65 2oj4_A RGS3, regulator of G-pr 39.2 29 0.001 26.4 3.9 65 209-273 17-81 (127)
66 3u3c_B Paxillin LD2 peptide; 4 35.3 31 0.0011 19.7 2.5 21 42-62 5-25 (26)
67 2k19_A Putative piscicolin 126 31.1 1.7E+02 0.006 22.3 7.0 37 247-283 59-95 (98)
68 2ihd_A RGS8, regulator of G-pr 30.5 46 0.0016 26.6 3.9 64 209-272 45-108 (155)
69 2dlv_A RGS18, regulator of G-p 30.3 36 0.0012 26.4 3.2 64 209-272 25-88 (140)
70 2af0_A Regulator of G-protein 29.7 43 0.0015 26.3 3.6 64 209-272 33-96 (146)
71 1cmz_A Protein (GAIP (G-alpha 28.3 42 0.0014 26.5 3.3 63 209-271 30-92 (152)
72 1dk8_A Axin; alpha-helix, PI-h 28.0 42 0.0014 26.3 3.2 53 214-266 27-84 (147)
73 2jm5_A RGS18, regulator of G-p 27.8 52 0.0018 26.0 3.8 64 209-272 21-84 (151)
74 1zv4_X RGS17, regulator of G-p 27.4 47 0.0016 26.7 3.5 58 214-271 48-105 (158)
75 2crp_A RGS5, regulator of G-pr 27.4 48 0.0016 26.2 3.5 64 209-272 35-98 (150)
76 2zrr_A Mundticin KS immunity p 21.4 68 0.0023 25.4 3.1 37 247-283 79-115 (118)
77 2bum_A Protocatechuate 3,4-dio 20.1 75 0.0026 27.3 3.4 26 87-112 109-139 (209)
No 1
>3ceg_A Baculoviral IAP repeat-containing protein 6; apoptosis, ligase, protease inhibitor, thiol protease inhibitor, UBL conjugation pathway; HET: MSE; 2.01A {Homo sapiens}
Probab=100.00 E-value=8.7e-48 Score=360.74 Aligned_cols=219 Identities=31% Similarity=0.587 Sum_probs=183.3
Q ss_pred hccccccccCc-----cccCCcchhcccc-cCCCCchHHHHHHHHHHHHHHhcCCCC----ceEEccCCCcccEEEEEEc
Q 039638 11 KYKNFARIPTH-----LLNQNHHFIDHKT-ININPKSELAERIHKEWEILEKNLPSS----IFVRASAERIDLMRAVIIG 80 (283)
Q Consensus 11 ~~~~~~~v~~~-----~~~~~h~~~~~~~-~~~~~~~~~~kRL~kEl~~L~~~~p~g----i~v~~~e~~l~~w~~~I~G 80 (283)
+|++|++|.+. ....+|||..... .....++.+.+||++|++.|++++|+| +++.++++|++.|+++|.|
T Consensus 39 ~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~kRL~kEl~~L~k~~p~g~~~~i~v~~~ednl~~w~~~I~G 118 (323)
T 3ceg_A 39 QFDTFEMVSEDEDGKLGFKVNYHYMSQVKNANDANSAARARRLAQEAVTLSTSLPLSSSSSVFVRCDEERLDIMKVLITG 118 (323)
T ss_dssp SEEEECCEEECTTSCEEESSCCTTHHHHHTCCCCCCHHHHHHHHHHHHHHHHHCCCCSSCCEEEEEESSCTTEEEEEEEB
T ss_pred cCceeeecccccccccccccchHHHhhhhccCCCCCHHHHHHHHHHHHHHHhCCCCCcccceeecccCCCccccEEEEeC
Confidence 49999998755 1124678864322 234567899999999999999998874 5677899999999999999
Q ss_pred CCCCccCCcEEEEEEEcCCCCCCCCCceeeecCc---ccCCCcccCCCceeeecccccccCCccCCCCCCCccCCcccCc
Q 039638 81 LEGTPYCHGLFFFDIFFPTTYPVTPPLIFYHSYG---FDLNPNLHRDGQVSLDLLTINVSHSWWNCKRDSDEKQQWNPQE 157 (283)
Q Consensus 81 p~~TPYegG~F~f~i~fP~~YP~~PP~v~F~t~i---~r~HPNv~~~G~VCLslL~~~t~~~w~~~~~~g~~~e~WsP~~ 157 (283)
|+||||+||+|+|+|.||++||++||+|+|.|++ .+||||||.+|+||||+|+ + |+ |.+.++|+|+.
T Consensus 119 P~~TpYegG~F~l~I~fP~dYP~~PP~V~F~T~~g~~~ifHPNV~~~G~ICLsiL~--~---~~-----g~~~e~WsPa~ 188 (323)
T 3ceg_A 119 PADTPYANGCFEFDVYFPQDYPSSPPLVNLETTGGHSVRFNPNLYNDGKVCLSILN--T---WH-----GRPEEKWNPQT 188 (323)
T ss_dssp CTTSTTBTCEEEEEEECCTTTTTSCCEEEECCSTTTTCCCBTTBCTTCBBCCGGGT--S---SC-----CCGGGSCCTTT
T ss_pred CCCCCcCCCEEEEEEeCCCCCCCCCCeEEEeccCCCcccccCCCCcCCeEechhhc--c---cc-----CCCcCCCCcCc
Confidence 9999999999999999999999999999999982 1499999999999999999 7 98 88889999993
Q ss_pred ccHHHHHHHHHHhhhccCCCCCCCCCC-------CcCCHHHHHHHHHHHHHHHc--ccccCCCCcchHHHHHHhhhhcCH
Q 039638 158 SNIMQVLVSIQHKVLNANPYYCHKGHP-------QKSNKEVFRLNCQAMLVMLQ--PHMQFKQPHMQFKHLVQGHFRNRA 228 (283)
Q Consensus 158 ~ti~~VL~sIq~Ll~~pnP~~~e~~~~-------~~~n~~~f~~~~~~m~~~~~--~~l~~pp~~~~fe~~v~~hf~~~~ 228 (283)
++|.+||++||+||.+++|+.++|++. +..|...|.+.|+.++..++ +.|++|| ..|+++|..||+.++
T Consensus 189 stI~~VLlsIqsLL~~~~Pn~~dP~~~~a~a~~~~~~d~~~Y~~~vr~~t~k~A~~~~l~~Pp--~~f~~~i~~hF~~~~ 266 (323)
T 3ceg_A 189 SSFLQVLVSVQSLILVAEPYFNEPGYERSRGTPSGTQSSREYDGNIRQATVKWAMLEQIRNPS--PCFKEVIHKHFYLKR 266 (323)
T ss_dssp CCHHHHHHHHHHHTSCSSGGGGSTTGGGGTTSHHHHHHHHHHHHHHHHHHHHHTTHHHHHSCC--TTTHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHcCCCCCCCCccCHHHHHhhhhhhhHHHHHHHHHHHHHHHhhHHHHhCCC--cccHHHHHHHHHHhH
Confidence 389999999999999888888888753 23467778777776554322 2345998 899999999999999
Q ss_pred HHHHHHHHHhcCC
Q 039638 229 HQILQIHKAEMKP 241 (283)
Q Consensus 229 ~~il~~~~~~~~~ 241 (283)
..|+++|++|+++
T Consensus 267 ~~i~~~~~~w~~e 279 (323)
T 3ceg_A 267 VEIMAQCEEWIAD 279 (323)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHh
Confidence 9999999999974
No 2
>2pwq_A Ubiquitin conjugating enzyme; structural genomics consortium, SGC, ligase; 1.90A {Plasmodium yoelii}
Probab=100.00 E-value=1.9e-42 Score=309.05 Aligned_cols=182 Identities=23% Similarity=0.304 Sum_probs=139.5
Q ss_pred CCCCchHHHHHHHHHHHHHHhcCCCCceEEccCCCcccEEEEEEcCCCCccCCcEEEEEEEcCCCCCCCCCceeeecCcc
Q 039638 36 NINPKSELAERIHKEWEILEKNLPSSIFVRASAERIDLMRAVIIGLEGTPYCHGLFFFDIFFPTTYPVTPPLIFYHSYGF 115 (283)
Q Consensus 36 ~~~~~~~~~kRL~kEl~~L~~~~p~gi~v~~~e~~l~~w~~~I~Gp~~TPYegG~F~f~i~fP~~YP~~PP~v~F~t~i~ 115 (283)
.....+.+.+||++|+++|++++|+||++.+.++|++.|.++|.||+||||+||+|+|+|.||++||++||+|+|.|++
T Consensus 17 ~~~~~s~a~~RL~kEl~~l~~~~~~gi~~~p~~~nl~~W~~~I~GP~~TpYegG~f~l~i~fP~~YP~~PP~V~F~T~i- 95 (216)
T 2pwq_A 17 LYFQGSKELLRLQKELKDIENENVQEIDAHIKDSNFFEWVGFIKGPEGTPYEGGHFTLAITIPNDYPYNPPKIKFVTKI- 95 (216)
T ss_dssp --CCSCHHHHHHHHHHHHHHHSCTTTEEEEECSSCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEESSCC-
T ss_pred cccccCHHHHHHHHHHHHHHhCCCCCEEEEEcCCccceeEEEEeCCCCCCccceEEEEEEECCCcCCCCCCcccccCCC-
Confidence 4555778899999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCccc-CCCceeeecccccccCCccCCCCCCCccCCcccCcccHHHHHHHHHHhhhccCCC---CCCCCCCCcCCHHH
Q 039638 116 DLNPNLH-RDGQVSLDLLTINVSHSWWNCKRDSDEKQQWNPQESNIMQVLVSIQHKVLNANPY---YCHKGHPQKSNKEV 191 (283)
Q Consensus 116 r~HPNv~-~~G~VCLslL~~~t~~~w~~~~~~g~~~e~WsP~~~ti~~VL~sIq~Ll~~pnP~---~~e~~~~~~~n~~~ 191 (283)
|||||| .+|+|||++|+ +.|+|+ ++|.+||++||+||.+|||. +.++|..+..|++.
T Consensus 96 -~HPNI~~~~G~ICL~iL~-----------------~~WsP~-~ti~~VL~sI~sLL~~Pnp~dPln~eaa~~~~~d~~~ 156 (216)
T 2pwq_A 96 -WHPNISSQTGAICLDVLK-----------------NEWSPA-LTIRTALLSIQALLSDPQPDDPQDAEVAKMYKENHAL 156 (216)
T ss_dssp -CBTTBCTTTCBBCCHHHH-----------------HHCCTT-CCHHHHHHHHHHHHHSCCTTSCSCHHHHHHHHHCHHH
T ss_pred -cCCCCcCCCCEEEchhhc-----------------ccCCCC-CcHHHHHHHHHHHHhCCCCCCcccHHHHHHHHHCHHH
Confidence 999999 69999999998 579999 79999999999999999975 44566778889999
Q ss_pred HHHHHHHHHHHHcccccCCCC----cchHHHHHHhhhhcCHHHHHHHHHHhcCC
Q 039638 192 FRLNCQAMLVMLQPHMQFKQP----HMQFKHLVQGHFRNRAHQILQIHKAEMKP 241 (283)
Q Consensus 192 f~~~~~~m~~~~~~~l~~pp~----~~~fe~~v~~hf~~~~~~il~~~~~~~~~ 241 (283)
|.++|+.|+..++ .++. .+..++++..+|......+...+..|-..
T Consensus 157 f~~~ar~~t~~ya----~~~~~~~~~~~v~~~~~mgf~~~~~~~al~~~~~~~~ 206 (216)
T 2pwq_A 157 FVKTASVWTKTFA----TGPKEEPREVIIKKITEMGFSEDQAKNALIKANWNET 206 (216)
T ss_dssp HHHHHHHHHHHHS----CCC----------------------------------
T ss_pred HHHHHHHHHHHhc----CCCcccchhhHHHHHHHcCCCHHHHHHHHHHcCCchH
Confidence 9999999999998 5442 35677888888988888888888888644
No 3
>1yh2_A HSPC150 protein similar to ubiquitin-conjugating enzyme; structural genomics consortium, HSCP150, ligase, SGC; 2.00A {Homo sapiens} SCOP: d.20.1.1
Probab=100.00 E-value=2.2e-41 Score=291.54 Aligned_cols=162 Identities=28% Similarity=0.448 Sum_probs=138.7
Q ss_pred chHHHHHHHHHHHHHHhcCCCCceEEccCCCcccEEEEEEcCCCCccCCcEEEEEEEcCCCCCCCCCceeeecCcccCCC
Q 039638 40 KSELAERIHKEWEILEKNLPSSIFVRASAERIDLMRAVIIGLEGTPYCHGLFFFDIFFPTTYPVTPPLIFYHSYGFDLNP 119 (283)
Q Consensus 40 ~~~~~kRL~kEl~~L~~~~p~gi~v~~~e~~l~~w~~~I~Gp~~TPYegG~F~f~i~fP~~YP~~PP~v~F~t~i~r~HP 119 (283)
++.+.+||++|+++|++++|+||++.++++|++.|+++|.||+||||+||+|+|+|.||++||++||+|+|.|++ |||
T Consensus 2 s~~~~~RL~kEl~~l~~~~~~gi~~~~~~~~l~~w~~~I~GP~~tpYegg~f~~~i~fp~~YP~~PP~v~f~t~i--~HP 79 (169)
T 1yh2_A 2 SMQRASRLKRELHMLATEPPPGITCWQDKDQMDDLRAQILGGANTPYEKGVFKLEVIIPERYPFEPPQIRFLTPI--YHP 79 (169)
T ss_dssp CHHHHHHHHHHHHHHHHSCCTTEEEEESSSCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEESSCC--CBT
T ss_pred chHHHHHHHHHHHHHHhCCCCCEEEEeCCCchheEEEEEECCCCCCccCCEEEEEEEeCCCCCCCCcEEEeecCC--ccc
Confidence 467889999999999999999999999999999999999999999999999999999999999999999999999 999
Q ss_pred cccCCCceeeecccccccCCccCCCCCCCccCCcccCcccHHHHHHHHHHhhhccCCC---CCCCCCCCcCCHHHHHHHH
Q 039638 120 NLHRDGQVSLDLLTINVSHSWWNCKRDSDEKQQWNPQESNIMQVLVSIQHKVLNANPY---YCHKGHPQKSNKEVFRLNC 196 (283)
Q Consensus 120 Nv~~~G~VCLslL~~~t~~~w~~~~~~g~~~e~WsP~~~ti~~VL~sIq~Ll~~pnP~---~~e~~~~~~~n~~~f~~~~ 196 (283)
|||.+|+|||++|+ + |. .+.|+|+ ++|.+||++||+||.+|+|. +.++|..+..|.+.|.+.|
T Consensus 80 Nv~~~G~iCl~iL~--~---~~--------~~~W~p~-~~i~~vL~si~~ll~~p~~~~p~n~~aa~~~~~~~~~y~~~~ 145 (169)
T 1yh2_A 80 NIDSAGRICLDVLK--L---PP--------KGAWRPS-LNIATVLTSIQLLMSEPNPDDPLMADISSEFKYNKPAFLKNA 145 (169)
T ss_dssp TBCTTCBBCCGGGS--C---TT--------TSCCCTT-SCHHHHHHHHHHHHHSCCTTSCSCHHHHHHHHHCHHHHHHHH
T ss_pred cCCcCCeEeccccc--C---Cc--------ccCCCCC-CcHHHHHHHHHHHHhCCCCcchHhHHHHHHHHhhHHHHHHHH
Confidence 99999999999998 3 32 3789999 79999999999999999875 4566677788999999999
Q ss_pred HHHHHHHcccccCCCCcchHHHHHH
Q 039638 197 QAMLVMLQPHMQFKQPHMQFKHLVQ 221 (283)
Q Consensus 197 ~~m~~~~~~~l~~pp~~~~fe~~v~ 221 (283)
+.++..++ .+.....++++|+
T Consensus 146 r~~~~~~a----~~~~~~~~~~~~~ 166 (169)
T 1yh2_A 146 RQWTEKHA----RQKQKADEEEMLD 166 (169)
T ss_dssp HHHHHHHS----CCC----------
T ss_pred HHHHHHHc----cccccCCHHHHhh
Confidence 99998887 4332356666654
No 4
>2ayv_A Ubiquitin-conjugating enzyme E2; structural genomics, structural genomics consortium, ubiquit ubiquitin-conjugating enzyme, SGC, ligase; 2.00A {Toxoplasma gondii} SCOP: d.20.1.1
Probab=100.00 E-value=2.9e-41 Score=290.20 Aligned_cols=147 Identities=29% Similarity=0.492 Sum_probs=133.0
Q ss_pred CCCchHHHHHHHHHHHHHHhcCCCCceEEccCCCcccEEEEEEcCCCCccCCcEEEEEEEcCCCCCCCCCceeeecCccc
Q 039638 37 INPKSELAERIHKEWEILEKNLPSSIFVRASAERIDLMRAVIIGLEGTPYCHGLFFFDIFFPTTYPVTPPLIFYHSYGFD 116 (283)
Q Consensus 37 ~~~~~~~~kRL~kEl~~L~~~~p~gi~v~~~e~~l~~w~~~I~Gp~~TPYegG~F~f~i~fP~~YP~~PP~v~F~t~i~r 116 (283)
....+.+.+||++|+++|++++|+||++.++++|++.|.++|.||+||||+||+|+|+|.||++||++||+|+|.|++
T Consensus 16 ~~~~~~~~~RL~kEl~~l~~~~~~gi~~~~~~~nl~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~V~F~T~i-- 93 (166)
T 2ayv_A 16 NLYFQGALKRINKELNDLSKDPPTNCSAGPVGDDMFHWQATIMGPEDSPYSGGVFFLNIHFPSDYPFKPPKVNFTTKI-- 93 (166)
T ss_dssp ---CTTHHHHHHHHHHHHHHSCCTTEEEEECSSCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEECSCC--
T ss_pred cccCcHHHHHHHHHHHHHHhCCCCCEEEEEcCCCcceeeEEEECCCCCCcCCCEEEEEEeCCCcCCCCCceeeeccCC--
Confidence 445667889999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCcccCCCceeeecccccccCCccCCCCCCCccCCcccCcccHHHHHHHHHHhhhccCCC---CCCCCCCCcCCHHHHH
Q 039638 117 LNPNLHRDGQVSLDLLTINVSHSWWNCKRDSDEKQQWNPQESNIMQVLVSIQHKVLNANPY---YCHKGHPQKSNKEVFR 193 (283)
Q Consensus 117 ~HPNv~~~G~VCLslL~~~t~~~w~~~~~~g~~~e~WsP~~~ti~~VL~sIq~Ll~~pnP~---~~e~~~~~~~n~~~f~ 193 (283)
||||||.+|+|||++|+ +.|+|+ ++|.+||++||+||.+|||. +.++|..+..|++.|.
T Consensus 94 ~HPNI~~~G~ICL~iL~-----------------~~WsP~-~ti~~vL~sI~sll~~pn~~~Pln~~aa~l~~~d~~~f~ 155 (166)
T 2ayv_A 94 YHPNINSQGAICLDILK-----------------DQWSPA-LTISKVLLSISSLLTDPNPDDPLVPEIAHLYKSDRMRYD 155 (166)
T ss_dssp CBTTBCTTCBBCCGGGT-----------------TTCCTT-CCHHHHHHHHHHHHHSCCTTSCSCHHHHHHHHHCHHHHH
T ss_pred cCCcCCCCCeEEccccc-----------------ccCCCC-CcHHHHHHHHHHHHhCCCCCchhhHHHHHHHHHCHHHHH
Confidence 99999999999999998 689999 79999999999999999875 4556667777888888
Q ss_pred HHHHHHHHHH
Q 039638 194 LNCQAMLVML 203 (283)
Q Consensus 194 ~~~~~m~~~~ 203 (283)
+.|+.++..+
T Consensus 156 ~~ar~~~~~~ 165 (166)
T 2ayv_A 156 QTAREWSQKY 165 (166)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHh
Confidence 8888877654
No 5
>3h8k_A Ubiquitin-conjugating enzyme E2 G2; alpha beta, all alpha, ligase, UBL conjugation pathway, endo reticulum, membrane, metal-binding; 1.80A {Homo sapiens} SCOP: d.20.1.1 PDB: 3fsh_A 2cyx_A 2kly_A
Probab=100.00 E-value=5.5e-41 Score=287.20 Aligned_cols=155 Identities=21% Similarity=0.355 Sum_probs=136.0
Q ss_pred hHHHHHHHHHHHHHHhcCCCCceEEccCC-CcccEEEEEEcCCCCccCCcEEEEEEEcCCCCCCCCCceeeecCcccCCC
Q 039638 41 SELAERIHKEWEILEKNLPSSIFVRASAE-RIDLMRAVIIGLEGTPYCHGLFFFDIFFPTTYPVTPPLIFYHSYGFDLNP 119 (283)
Q Consensus 41 ~~~~kRL~kEl~~L~~~~p~gi~v~~~e~-~l~~w~~~I~Gp~~TPYegG~F~f~i~fP~~YP~~PP~v~F~t~i~r~HP 119 (283)
+++.+||++|+++|++++++||++.+.++ |++.|+++|.||+||||+||+|+|+|.||++||++||+|+|.|++ |||
T Consensus 2 ~~a~~RL~kEl~~l~~~~~~gi~~~~~~~~nl~~w~~~I~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i--~HP 79 (164)
T 3h8k_A 2 GTALKRLMAEYKQLTLNPPEGIVAGPMNEENFFEWEALIMGPEDTCFEFGVFPAILSFPLDYPLSPPKMRFTCEM--FHP 79 (164)
T ss_dssp CHHHHHHHHHHHHHHHSCCTTEEEEESSTTCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEECSCC--CCT
T ss_pred cHHHHHHHHHHHHHHhCCCCCEEEEECCCCCccEEEEEEeCCCCCCCCCCEEEEEEECCCCCCCCCCEEEEcCCC--ccC
Confidence 46789999999999999999999998665 999999999999999999999999999999999999999999998 999
Q ss_pred cccCCCceeeecccccccCCcc-CCCCCCCccCCcccCcccHHHHHHHHHHhhhccCCC---CCCCCCCCcCCHHHHHHH
Q 039638 120 NLHRDGQVSLDLLTINVSHSWW-NCKRDSDEKQQWNPQESNIMQVLVSIQHKVLNANPY---YCHKGHPQKSNKEVFRLN 195 (283)
Q Consensus 120 Nv~~~G~VCLslL~~~t~~~w~-~~~~~g~~~e~WsP~~~ti~~VL~sIq~Ll~~pnP~---~~e~~~~~~~n~~~f~~~ 195 (283)
|||.+|+|||++|+ + |. |++++|...++|+|+ +||.+||++||+||.+|||. +.++|..+..|++.|.+.
T Consensus 80 NV~~~G~iCl~iL~--~---~~~~~~~~~~~~~~W~p~-~ti~~vL~~i~~ll~~pn~~~p~n~~aa~~~~~~~~~f~~~ 153 (164)
T 3h8k_A 80 NIYPDGRVCISILH--A---PGDDPMGYESSAERWSPV-QSVEKILLSVVSMLAEPNDESGANVDASKMWRDDREQFYKI 153 (164)
T ss_dssp TBCTTSBBCCGGGS--C---SCSCCCSCCTTCCCCCTT-CCHHHHHHHHHHHHHSCCCSSCSSHHHHHHHHHCHHHHHHH
T ss_pred CCCCCCcEeeeccc--C---cccccccccccccCCCCC-CcHHHHHHHHHHHHcCCCCCCccCHHHHHHHHHCHHHHHHH
Confidence 99999999999998 4 42 345567778999999 79999999999999999875 344555667777778777
Q ss_pred HHHHHHHH
Q 039638 196 CQAMLVML 203 (283)
Q Consensus 196 ~~~m~~~~ 203 (283)
|+.++...
T Consensus 154 ~~~~~~~s 161 (164)
T 3h8k_A 154 AKQIVQKS 161 (164)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHh
Confidence 77766544
No 6
>2ucz_A UBC7, ubiquitin conjugating enzyme; ubiquitin conjugation, ligase, yeast; 2.93A {Saccharomyces cerevisiae} SCOP: d.20.1.1
Probab=100.00 E-value=7.9e-41 Score=286.67 Aligned_cols=157 Identities=22% Similarity=0.377 Sum_probs=136.0
Q ss_pred hHHHHHHHHHHHHHHhcCCCCceEEcc-CCCcccEEEEEEcCCCCccCCcEEEEEEEcCCCCCCCCCceeeecCcccCCC
Q 039638 41 SELAERIHKEWEILEKNLPSSIFVRAS-AERIDLMRAVIIGLEGTPYCHGLFFFDIFFPTTYPVTPPLIFYHSYGFDLNP 119 (283)
Q Consensus 41 ~~~~kRL~kEl~~L~~~~p~gi~v~~~-e~~l~~w~~~I~Gp~~TPYegG~F~f~i~fP~~YP~~PP~v~F~t~i~r~HP 119 (283)
+.+.+||++|+++|++++++||++.+. ++|++.|+++|.||+||||+||+|+|+|.||++||++||+|+|.|++ |||
T Consensus 3 ~~a~~RL~kEl~~l~~~~~~gi~~~~~~~~~l~~w~~~i~GP~~tpYegg~f~~~i~fp~~YP~~PP~v~f~t~i--~HP 80 (165)
T 2ucz_A 3 KTAQKRLLKELQQLIKDSPPGIVAGPKSENNIFIWDCLIQGPPDTPYADGVFNAKLEFPKDYPLSPPKLTFTPSI--LHP 80 (165)
T ss_dssp HHHHHHHHHHHHHHHHSCCTTEEEEESSSSCCSEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSCC--SCT
T ss_pred hHHHHHHHHHHHHHHhCCCCCEEEEECCCCCccEEEEEEECCCCCCccCcEEEEEEECCccCCCCCCEEEEeCCC--ccC
Confidence 468899999999999999999999986 47999999999999999999999999999999999999999999999 999
Q ss_pred cccCCCceeeecccccccCCccCCCCCCCccCCcccCcccHHHHHHHHHHhhhccCCC---CCCCCCCCcCCHHHHHHHH
Q 039638 120 NLHRDGQVSLDLLTINVSHSWWNCKRDSDEKQQWNPQESNIMQVLVSIQHKVLNANPY---YCHKGHPQKSNKEVFRLNC 196 (283)
Q Consensus 120 Nv~~~G~VCLslL~~~t~~~w~~~~~~g~~~e~WsP~~~ti~~VL~sIq~Ll~~pnP~---~~e~~~~~~~n~~~f~~~~ 196 (283)
|||.+|+||||+|+.+.+| +.+++...++|+|+ ++|.+||++||+||.+|||. +.++|..+..|++.|.+.|
T Consensus 81 Nv~~~G~iCl~iL~~~~~~----~~~~~~~~~~W~p~-~~i~~vL~si~~ll~~Pn~~~p~n~~aa~~~~~~~~~y~~~v 155 (165)
T 2ucz_A 81 NIYPNGEVCISILHSPGDD----PNMYELAEERWSPV-QSVEKILLSVMSMLSEPNIESGANIDACILWRDNRPEFERQV 155 (165)
T ss_dssp TBCTTSBBCCGGGSCCCSC----TTSTTTTTTSCCTT-CCHHHHHHHHHHHHHSCCGGGCCCHHHHHHHHTTHHHHHHHH
T ss_pred CCCCCCcEeehhhCCcccc----ccccCCCCCCCCCc-CcHHHHHHHHHHHHhCCCCCCchhHHHHHHHHHCHHHHHHHH
Confidence 9999999999999732222 33456667999999 79999999999999999864 4555666777888888888
Q ss_pred HHHHHHHc
Q 039638 197 QAMLVMLQ 204 (283)
Q Consensus 197 ~~m~~~~~ 204 (283)
+.++....
T Consensus 156 ~~~~~~~~ 163 (165)
T 2ucz_A 156 KLSILKSL 163 (165)
T ss_dssp HHHHHHHT
T ss_pred HHHHHHHh
Confidence 87765543
No 7
>4gpr_A Ubiquitin-conjugating enzyme family protein; ubiquitin conjugation, EHU ehring1, thiol esterification, ligase; 1.60A {Entamoeba histolytica}
Probab=100.00 E-value=6e-41 Score=283.71 Aligned_cols=145 Identities=28% Similarity=0.511 Sum_probs=135.9
Q ss_pred chHHHHHHHHHHHHHHhcCCCCceEEccCCCcccEEEEEEcCCCCccCCcEEEEEEEcCCCCCCCCCceeeecCcccCCC
Q 039638 40 KSELAERIHKEWEILEKNLPSSIFVRASAERIDLMRAVIIGLEGTPYCHGLFFFDIFFPTTYPVTPPLIFYHSYGFDLNP 119 (283)
Q Consensus 40 ~~~~~kRL~kEl~~L~~~~p~gi~v~~~e~~l~~w~~~I~Gp~~TPYegG~F~f~i~fP~~YP~~PP~v~F~t~i~r~HP 119 (283)
++.+.+||++|+++|++++|+||++.+.++|+..|+++|.||+||||+||+|+|+|.||++||++||+|+|.|++ |||
T Consensus 2 a~~a~~RL~kEl~~l~~~~~~~i~~~p~~~nl~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~t~i--~HP 79 (151)
T 4gpr_A 2 AAMAMRRIQKELREIQQDPPCNCSAGPVGDDIFHWTATITGPDDSPYQGGLFFLDVHFPVDYPFKAPRVTFMTKV--YHP 79 (151)
T ss_dssp CHHHHHHHHHHHHHHHHSCCTTEEEEESSSCTTEEEEEEECCSSSTTTTCEEEEEEECCTTTTSSCCEEEESSCC--CBT
T ss_pred chHHHHHHHHHHHHHHhCCCCCEEEEEcCCCceEEEEEEeCCCCCCcCCCEEEEEEECCCCCCCCcceeEEecCc--ccc
Confidence 567899999999999999999999999999999999999999999999999999999999999999999999999 999
Q ss_pred cccCCCceeeecccccccCCccCCCCCCCccCCcccCcccHHHHHHHHHHhhhccCCC---CCCCCCCCcCCHHHHHHHH
Q 039638 120 NLHRDGQVSLDLLTINVSHSWWNCKRDSDEKQQWNPQESNIMQVLVSIQHKVLNANPY---YCHKGHPQKSNKEVFRLNC 196 (283)
Q Consensus 120 Nv~~~G~VCLslL~~~t~~~w~~~~~~g~~~e~WsP~~~ti~~VL~sIq~Ll~~pnP~---~~e~~~~~~~n~~~f~~~~ 196 (283)
||+.+|+|||++|. ++|+|+ ++|.+||++|++||.+|||. +.++|..+..|++.|.+.|
T Consensus 80 nv~~~G~iCl~iL~-----------------~~W~p~-~~i~~vl~~i~~ll~~p~~~~p~n~~aa~~~~~d~~~f~~~a 141 (151)
T 4gpr_A 80 NINKNGVICLDILK-----------------DQWSPA-LTLSRVLLSISSLLTDPNPSDPLDPEVANVLRANKKQFEDTA 141 (151)
T ss_dssp TBCTTCBBCCGGGT-----------------TTCCTT-CCHHHHHHHHHHHHHCCCTTSCSSHHHHHHHHHCHHHHHHHH
T ss_pred eECCCCEEEccccc-----------------CCCCCC-CcHHHHHHHHHHHhcCCCCCCchhHHHHHHHHHCHHHHHHHH
Confidence 99999999999997 689999 79999999999999999875 4566677888999999999
Q ss_pred HHHHHHHc
Q 039638 197 QAMLVMLQ 204 (283)
Q Consensus 197 ~~m~~~~~ 204 (283)
+.++..++
T Consensus 142 r~~~~~ya 149 (151)
T 4gpr_A 142 REWTRMYA 149 (151)
T ss_dssp HHHHHHHC
T ss_pred HHHHHHhc
Confidence 99888876
No 8
>1zdn_A Ubiquitin-conjugating enzyme E2S; structural genomics consortium, ubiquitin-conjuga enzyme, ligase, SGC; 1.93A {Homo sapiens} SCOP: d.20.1.1
Probab=100.00 E-value=4.1e-41 Score=286.82 Aligned_cols=149 Identities=23% Similarity=0.429 Sum_probs=135.9
Q ss_pred cCCCCchHHHHHHHHHHHHHHhcCCCCceEEccCCCcccEEEEEEcCCCCccCCcEEEEEEEcCCCCCCCCCceeeecCc
Q 039638 35 ININPKSELAERIHKEWEILEKNLPSSIFVRASAERIDLMRAVIIGLEGTPYCHGLFFFDIFFPTTYPVTPPLIFYHSYG 114 (283)
Q Consensus 35 ~~~~~~~~~~kRL~kEl~~L~~~~p~gi~v~~~e~~l~~w~~~I~Gp~~TPYegG~F~f~i~fP~~YP~~PP~v~F~t~i 114 (283)
+..+.++.+.+||++|+++|++++++||++.++++|++.|+++|.||+||||+||+|+|+|.||++||++||+|+|.|++
T Consensus 6 ~~~~~s~~~~~RL~kEl~~l~~~~~~gi~~~~~~~~l~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i 85 (158)
T 1zdn_A 6 NVENLPPHIIRLVYKEVTTLTADPPDGIKVFPNEEDLTDLQVTIEGPEGTPYAGGLFRMKLLLGKDFPASPPKGYFLTKI 85 (158)
T ss_dssp --CCSCHHHHHHHHHHHHHHHHSCCTTEEEEECSSCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSCC
T ss_pred cccccCHHHHHHHHHHHHHHHhCCCCCEEEEECCCChhheeEEEECCCCCCccCcEEEEEEEcCCCCCCCCCEEEeccCc
Confidence 44567888999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCCcccCCCceeeecccccccCCccCCCCCCCccCCcccCcccHHHHHHHHHHhhhccCCC---CCCCCCCCcCCHHH
Q 039638 115 FDLNPNLHRDGQVSLDLLTINVSHSWWNCKRDSDEKQQWNPQESNIMQVLVSIQHKVLNANPY---YCHKGHPQKSNKEV 191 (283)
Q Consensus 115 ~r~HPNv~~~G~VCLslL~~~t~~~w~~~~~~g~~~e~WsP~~~ti~~VL~sIq~Ll~~pnP~---~~e~~~~~~~n~~~ 191 (283)
||||||.+|+|||++|+ +.|+|+ ++|.+||++|++||.+|||. +.++|+.+..|++.
T Consensus 86 --~HPnv~~~G~iCl~iL~-----------------~~W~p~-~~i~~vL~~i~~ll~~pn~~~p~n~~aa~~~~~d~~~ 145 (158)
T 1zdn_A 86 --FHPNVGANGEICVNVLK-----------------RDWTAE-LGIRHVLLTIKCLLIHPNPESALNEEAGRLLLENYEE 145 (158)
T ss_dssp --CCTTBCTTSBBCHHHHT-----------------TTCCTT-CCHHHHHHHHHHHHHSCCGGGCSSHHHHHHHHHCHHH
T ss_pred --ccCCCCCCCEEehhhcC-----------------CCCCCC-CcHHHHHHHHHHHHhCCCCCCcccHHHHHHHHHCHHH
Confidence 99999999999999998 689999 79999999999999999874 45666677788888
Q ss_pred HHHHHHHHHHHH
Q 039638 192 FRLNCQAMLVML 203 (283)
Q Consensus 192 f~~~~~~m~~~~ 203 (283)
|.+.|+.|+..+
T Consensus 146 f~~~a~~~t~~~ 157 (158)
T 1zdn_A 146 YAARARLLTEIH 157 (158)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHh
Confidence 888888877654
No 9
>2c4o_A Ubiquitin-conjugating enzyme E2 D2; thioesterification, ligase, UBL conjugation pathway; HET: CME; 1.94A {Homo sapiens} SCOP: d.20.1.1 PDB: 2clw_A* 2c4p_A
Probab=100.00 E-value=6.9e-41 Score=287.57 Aligned_cols=149 Identities=28% Similarity=0.491 Sum_probs=134.0
Q ss_pred CCCCchHHHHHHHHHHHHHHhcCCCCceEEccCCCcccEEEEEEcCCCCccCCcEEEEEEEcCCCCCCCCCceeeecCcc
Q 039638 36 NINPKSELAERIHKEWEILEKNLPSSIFVRASAERIDLMRAVIIGLEGTPYCHGLFFFDIFFPTTYPVTPPLIFYHSYGF 115 (283)
Q Consensus 36 ~~~~~~~~~kRL~kEl~~L~~~~p~gi~v~~~e~~l~~w~~~I~Gp~~TPYegG~F~f~i~fP~~YP~~PP~v~F~t~i~ 115 (283)
.....+.+.+||++|+++|++++++||++.+.++|+..|.++|.||+||||+||+|+|+|.||++||++||+|+|.|++
T Consensus 13 ~~~~~~~~~~RL~kEl~~l~~~~~~gi~~~p~~~nl~~W~~~I~GP~~TpYegg~f~l~i~fp~~YP~~PP~v~F~T~i- 91 (165)
T 2c4o_A 13 LVPRGSMALKRIHKELNDLARDPPAQCSAGPVGDDMFHWQATIMGPNDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRI- 91 (165)
T ss_dssp ---CCHHHHHHHHHHHHHHHSSCCTTEEEEESSSCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEECSCC-
T ss_pred cccCCcHHHHHHHHHHHHHHhCCCCCEEEEEcCCCcceeEEEEECCCCCCccCceEEEEEECCCcCCCCCCEEEEecCC-
Confidence 4566788999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCcccCCCceeeecccccccCCccCCCCCCCccCCcccCcccHHHHHHHHHHhhhccCCC---CCCCCCCCcCCHHHH
Q 039638 116 DLNPNLHRDGQVSLDLLTINVSHSWWNCKRDSDEKQQWNPQESNIMQVLVSIQHKVLNANPY---YCHKGHPQKSNKEVF 192 (283)
Q Consensus 116 r~HPNv~~~G~VCLslL~~~t~~~w~~~~~~g~~~e~WsP~~~ti~~VL~sIq~Ll~~pnP~---~~e~~~~~~~n~~~f 192 (283)
||||||.+|+|||++|+ ++|+|+ ++|.+||++||+||.+|||. +.++|..+..|.+.|
T Consensus 92 -~HPnV~~~G~ICl~iL~-----------------~~W~P~-~ti~~vL~si~~ll~~pn~~~P~n~~aa~~~~~d~~~y 152 (165)
T 2c4o_A 92 -YHPNINSNGSICLDILR-----------------SQWSPA-LTISKVLLSICSLLCDPNPDDPLVPEIARIYKTDREKY 152 (165)
T ss_dssp -CBTTBCTTCBBCCGGGT-----------------TTCCTT-CCHHHHHHHHHHHHHSCCTTSCSSHHHHHHHHHCHHHH
T ss_pred -cCCcCCCCCeEeehhhc-----------------CCCCCc-CcHHHHHHHHHHHHhCCCCCccccHHHHHHHHHHHHHH
Confidence 99999999999999998 689999 79999999999999999875 345556667788888
Q ss_pred HHHHHHHHHHHc
Q 039638 193 RLNCQAMLVMLQ 204 (283)
Q Consensus 193 ~~~~~~m~~~~~ 204 (283)
.+.|+.++..++
T Consensus 153 ~~~ar~~~~~~a 164 (165)
T 2c4o_A 153 NRIAREWTQKYA 164 (165)
T ss_dssp HHHHHHHHHHTT
T ss_pred HHHHHHHHHHHh
Confidence 888888776554
No 10
>2c2v_B Ubiquitin-conjugating enzyme E2 N; chaperone, heat-shock protein complex, E3 ligase, ubiquitiny TPR, heat-shock protein; 2.9A {Homo sapiens} SCOP: d.20.1.1
Probab=100.00 E-value=5.2e-41 Score=285.07 Aligned_cols=143 Identities=26% Similarity=0.418 Sum_probs=133.8
Q ss_pred HHHHHHHHHHHHHHhcCCCCceEEccCCCcccEEEEEEcCCCCccCCcEEEEEEEcCCCCCCCCCceeeecCcccCCCcc
Q 039638 42 ELAERIHKEWEILEKNLPSSIFVRASAERIDLMRAVIIGLEGTPYCHGLFFFDIFFPTTYPVTPPLIFYHSYGFDLNPNL 121 (283)
Q Consensus 42 ~~~kRL~kEl~~L~~~~p~gi~v~~~e~~l~~w~~~I~Gp~~TPYegG~F~f~i~fP~~YP~~PP~v~F~t~i~r~HPNv 121 (283)
.+.+||++|+++|++++|+||++.+.++|++.|+++|.||+||||+||+|+|+|.||++||++||+|+|.|++ |||||
T Consensus 5 ~~~~RL~kEl~~l~~~~~~~i~~~~~~~~l~~w~~~i~GP~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i--~HPnv 82 (154)
T 2c2v_B 5 GLPRRIIKETQRLLAEPVPGIKAEPDESNARYFHVVIAGPQDSPFEGGTFKLELFLPEEYPMAAPKVRFMTKI--YHPNV 82 (154)
T ss_dssp SCCHHHHHHHHHHHHSCCTTEEEEECSSCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEECSCC--CCTTB
T ss_pred HHHHHHHHHHHHHHhCCCCCEEEEECCCchheEEEEEECCCCCCcCCCeEEEEEEcCCCCCCCCCEEEeecCc--ccCcC
Confidence 4568999999999999999999999999999999999999999999999999999999999999999999999 99999
Q ss_pred cCCCceeeecccccccCCccCCCCCCCccCCcccCcccHHHHHHHHHHhhhccCCC---CCCCCCCCcCCHHHHHHHHHH
Q 039638 122 HRDGQVSLDLLTINVSHSWWNCKRDSDEKQQWNPQESNIMQVLVSIQHKVLNANPY---YCHKGHPQKSNKEVFRLNCQA 198 (283)
Q Consensus 122 ~~~G~VCLslL~~~t~~~w~~~~~~g~~~e~WsP~~~ti~~VL~sIq~Ll~~pnP~---~~e~~~~~~~n~~~f~~~~~~ 198 (283)
|.+|+|||++|+ ++|+|+ ++|.+||++||+||.+|||. +.++|..+..|++.|.+.|+.
T Consensus 83 ~~~G~iCl~iL~-----------------~~W~p~-~~i~~vl~~i~~ll~~pn~~~p~n~~aa~~~~~d~~~f~~~ar~ 144 (154)
T 2c2v_B 83 DKLGRICLDILK-----------------DKWSPA-LQIRTVLLSIQALLSAPNPDDPLANDVAEQWKTNEAQAIETARA 144 (154)
T ss_dssp CTTCBBCCHHHH-----------------TSCCTT-CCHHHHHHHHHHHTTSCCCCCC--CHHHHHHHHHHHHHHHHHHH
T ss_pred ccCCeEEchhcc-----------------CCCCCC-CcHHHHHHHHHHHHhCCCCCCcccHHHHHHHHHCHHHHHHHHHH
Confidence 999999999998 689998 79999999999999999875 567777888899999999999
Q ss_pred HHHHHc
Q 039638 199 MLVMLQ 204 (283)
Q Consensus 199 m~~~~~ 204 (283)
++..++
T Consensus 145 ~~~~~a 150 (154)
T 2c2v_B 145 WTRLYA 150 (154)
T ss_dssp HHHHHS
T ss_pred HHHHhc
Confidence 998877
No 11
>2awf_A Ubiquitin-conjugating enzyme E2 G1; ligase, UBL conjugation pathway, structural genomics, structural genomics consortium SGC; 2.10A {Homo sapiens} SCOP: d.20.1.1 PDB: 1pzv_A
Probab=100.00 E-value=1.8e-40 Score=286.67 Aligned_cols=153 Identities=17% Similarity=0.294 Sum_probs=112.9
Q ss_pred CchHHHHHHHHHHHHHHhcCCCCceEEccC-CCcccEEEEEEcCCCCccCCcEEEEEEEcCCCCCCCCCceeeecCcccC
Q 039638 39 PKSELAERIHKEWEILEKNLPSSIFVRASA-ERIDLMRAVIIGLEGTPYCHGLFFFDIFFPTTYPVTPPLIFYHSYGFDL 117 (283)
Q Consensus 39 ~~~~~~kRL~kEl~~L~~~~p~gi~v~~~e-~~l~~w~~~I~Gp~~TPYegG~F~f~i~fP~~YP~~PP~v~F~t~i~r~ 117 (283)
.++.+.+||++|+++|++++++||++.+.+ +|++.|.++|.||+||||+||+|+|+|.||++||++||+|+|.|++ |
T Consensus 14 ~~~~~~~rL~kEl~~l~~~~~~gi~~~p~~~~nl~~W~~~I~GP~~TpYegG~f~~~i~fp~~YP~~PP~v~F~T~i--~ 91 (172)
T 2awf_A 14 LVPRGSLLLRRQLAELNKNPVEGFSAGLIDDNDLYRWEVLIIGPPDTLYEGGVFKAHLTFPKDYPLRPPKMKFITEI--W 91 (172)
T ss_dssp CCCTTHHHHHHHHHHHHHSCCTTEEEEESSTTCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEECSCC--C
T ss_pred ChHHHHHHHHHHHHHHHhCCCCCEEEEECCCccccccEEEEeCCCCCCcCCcEEEEEEECCcccCCCCCcccccCCC--c
Confidence 466788999999999999999999999854 7999999999999999999999999999999999999999999999 9
Q ss_pred CCcccCCCceeeecccccccCCccCCCCCCCccCCcccCcccHHHHHHHHHHhhhccCCC---CCCCCCCCcCCHH-HHH
Q 039638 118 NPNLHRDGQVSLDLLTINVSHSWWNCKRDSDEKQQWNPQESNIMQVLVSIQHKVLNANPY---YCHKGHPQKSNKE-VFR 193 (283)
Q Consensus 118 HPNv~~~G~VCLslL~~~t~~~w~~~~~~g~~~e~WsP~~~ti~~VL~sIq~Ll~~pnP~---~~e~~~~~~~n~~-~f~ 193 (283)
|||||.+|+|||++|+.+.+| .++++...+.|+|+ ++|.+||++||+||.+|||. +.++|..+..|++ .|.
T Consensus 92 HPNV~~~G~IClsiL~~~~~d----~~~~~~~~~~WsP~-~ti~~vL~sI~sll~~Pn~~~p~n~~aa~~~~~d~~~~f~ 166 (172)
T 2awf_A 92 HPNVDKNGDVCISILHEPGED----KYGYEKPEERWLPI-HTVETIMISVISMLADPNGDSPANVDAAKEWREDRNGEFK 166 (172)
T ss_dssp CTTBCTTCBBCCGGGSCC-------------CTTSCCTT-CCHHHHHHHHHHHHSCC-----------------------
T ss_pred cCCCCCCCcEehhhcCCcccc----cccccccCCCCCCc-CcHHHHHHHHHHHHHCcCCCCccCHHHHHHHHHCcHHHHH
Confidence 999999999999999822122 23355567899999 79999999999999999864 6677778888888 888
Q ss_pred HHHHH
Q 039638 194 LNCQA 198 (283)
Q Consensus 194 ~~~~~ 198 (283)
+.|+.
T Consensus 167 ~~vr~ 171 (172)
T 2awf_A 167 RKVAR 171 (172)
T ss_dssp -----
T ss_pred HHHHh
Confidence 77764
No 12
>1z2u_A Ubiquitin-conjugating enzyme E2 2; PSI, secsg, proteosome pathway, structural genomics, protein structure initiative; 1.10A {Caenorhabditis elegans} SCOP: d.20.1.1 PDB: 3tgd_A 2esk_A 1ur6_A 1w4u_A 4a49_B* 4a4b_C* 4a4c_C* 3eb6_B 3l1y_A 2esp_A 2eso_A 2esq_A 3l1z_A 2oxq_A 3a33_A 4ddg_D 4ddi_D 1x23_A 3rpg_A 2fuh_A ...
Probab=100.00 E-value=1.6e-40 Score=280.71 Aligned_cols=145 Identities=28% Similarity=0.490 Sum_probs=132.5
Q ss_pred chHHHHHHHHHHHHHHhcCCCCceEEccCCCcccEEEEEEcCCCCccCCcEEEEEEEcCCCCCCCCCceeeecCcccCCC
Q 039638 40 KSELAERIHKEWEILEKNLPSSIFVRASAERIDLMRAVIIGLEGTPYCHGLFFFDIFFPTTYPVTPPLIFYHSYGFDLNP 119 (283)
Q Consensus 40 ~~~~~kRL~kEl~~L~~~~p~gi~v~~~e~~l~~w~~~I~Gp~~TPYegG~F~f~i~fP~~YP~~PP~v~F~t~i~r~HP 119 (283)
+..+.+||++|+++|++++++||++.+.++|+..|+++|.||+||||+||+|+|+|.||++||++||+|+|.|++ |||
T Consensus 2 s~~~~~RL~kEl~~l~~~~~~~~~~~~~~~~l~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i--~HP 79 (150)
T 1z2u_A 2 SHMALKRIQKELQDLGRDPPAQCSAGPVGDDLFHWQATIMGPPESPYQGGVFFLTIHFPTDYPFKPPKVAFTTRI--YHP 79 (150)
T ss_dssp CCHHHHHHHHHHHHHHHSCCSSEEEEEETTEEEEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEESSCC--CBT
T ss_pred chHHHHHHHHHHHHHHhCCCCCEEEEECCCcceEEEEEEECCCCCCcCCCEEEEEEECCCCCCCCCcEEEEecCc--ccC
Confidence 456789999999999999999999999999999999999999999999999999999999999999999999999 999
Q ss_pred cccCCCceeeecccccccCCccCCCCCCCccCCcccCcccHHHHHHHHHHhhhccCCC---CCCCCCCCcCCHHHHHHHH
Q 039638 120 NLHRDGQVSLDLLTINVSHSWWNCKRDSDEKQQWNPQESNIMQVLVSIQHKVLNANPY---YCHKGHPQKSNKEVFRLNC 196 (283)
Q Consensus 120 Nv~~~G~VCLslL~~~t~~~w~~~~~~g~~~e~WsP~~~ti~~VL~sIq~Ll~~pnP~---~~e~~~~~~~n~~~f~~~~ 196 (283)
|||.+|+|||++|+ +.|+|+ ++|.+||++||+||.+|||. +.++|..+..|.+.|.+.|
T Consensus 80 nv~~~G~iCl~iL~-----------------~~W~p~-~~i~~vl~~i~~ll~~pn~~~p~n~~aa~~~~~~~~~f~~~~ 141 (150)
T 1z2u_A 80 NINSNGSICLDILR-----------------SQWSPA-LTISKVLLSICSLLCDPNPDDPLVPEIARIYKTDRERYNQLA 141 (150)
T ss_dssp TBCTTCBBCCGGGT-----------------TTCCTT-CCHHHHHHHHHHHHHSCCTTSCSCHHHHHHHHHCHHHHHHHH
T ss_pred cCCCCCeEeecccc-----------------CCCCCC-CCHHHHHHHHHHHhhCCCCCCccCHHHHHHHHHHHHHHHHHH
Confidence 99999999999998 689999 79999999999999999875 3455566777888888888
Q ss_pred HHHHHHHc
Q 039638 197 QAMLVMLQ 204 (283)
Q Consensus 197 ~~m~~~~~ 204 (283)
+.++..++
T Consensus 142 ~~~~~~~a 149 (150)
T 1z2u_A 142 REWTQKYA 149 (150)
T ss_dssp HHHHHHHC
T ss_pred HHHHHHHh
Confidence 88776654
No 13
>2r0j_A Ubiquitin carrier protein; ubiquitin conjugating, malaria, ligas conjugation pathway, structural genomics, structural genomi consortium; 1.85A {Plasmodium falciparum} PDB: 3e95_A
Probab=100.00 E-value=1.5e-40 Score=280.72 Aligned_cols=141 Identities=27% Similarity=0.472 Sum_probs=131.8
Q ss_pred HHHHHHHHHHHHhcCCCCceEEccCCCcccEEEEEEcCCCCccCCcEEEEEEEcCCCCCCCCCceeeecCcccCCCcccC
Q 039638 44 AERIHKEWEILEKNLPSSIFVRASAERIDLMRAVIIGLEGTPYCHGLFFFDIFFPTTYPVTPPLIFYHSYGFDLNPNLHR 123 (283)
Q Consensus 44 ~kRL~kEl~~L~~~~p~gi~v~~~e~~l~~w~~~I~Gp~~TPYegG~F~f~i~fP~~YP~~PP~v~F~t~i~r~HPNv~~ 123 (283)
.+||++|+++|++++++||++.+.++|++.|+++|.||+||||+||+|+|+|.||++||++||+|+|.|++ ||||||.
T Consensus 3 ~~RL~kEl~~l~~~~~~~i~~~~~~~~l~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i--~HPnv~~ 80 (149)
T 2r0j_A 3 PRRITKETQNLANEPPPGIMAVPVPENYRHFNILINGPDGTPYEGGTYKLELFLPEQYPMEPPKVRFLTKI--YHPNIDK 80 (149)
T ss_dssp CHHHHHHHHHHHHSCCTTEEEEEETTEEEEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEECSCC--CBTTBCT
T ss_pred HHHHHHHHHHHHhCCCCCEEEEECCCcccEEEEEEECCCCCCcCCCEEEEEEeCCcccCCCCCeeEeccCC--ccCCCCC
Confidence 48999999999999999999999999999999999999999999999999999999999999999999999 9999999
Q ss_pred CCceeeecccccccCCccCCCCCCCccCCcccCcccHHHHHHHHHHhhhccCCC---CCCCCCCCcCCHHHHHHHHHHHH
Q 039638 124 DGQVSLDLLTINVSHSWWNCKRDSDEKQQWNPQESNIMQVLVSIQHKVLNANPY---YCHKGHPQKSNKEVFRLNCQAML 200 (283)
Q Consensus 124 ~G~VCLslL~~~t~~~w~~~~~~g~~~e~WsP~~~ti~~VL~sIq~Ll~~pnP~---~~e~~~~~~~n~~~f~~~~~~m~ 200 (283)
+|+|||++|+ +.|+|+ ++|.+||++||+||.+|+|. +.++|..+..|++.|.+.|+.++
T Consensus 81 ~G~iCl~iL~-----------------~~W~p~-~~i~~vl~~i~~ll~~p~~~~p~n~~aa~~~~~~~~~f~~~~~~~~ 142 (149)
T 2r0j_A 81 LGRICLDILK-----------------DKWSPA-LQIRTVLLSIQALLSSPEPDDPLDSKVAEHFKQDKNDAEHVARQWN 142 (149)
T ss_dssp TCBBCCGGGT-----------------TTCCTT-SCHHHHHHHHHHHHHSCCTTSCSSCHHHHHHHHCHHHHHHHHHHHH
T ss_pred CCEEechhcC-----------------CCCCCC-CcHHHHHHHHHHHHhCCCCCCchhHHHHHHHHHCHHHHHHHHHHHH
Confidence 9999999998 689999 79999999999999999875 45566677789999999999888
Q ss_pred HHHc
Q 039638 201 VMLQ 204 (283)
Q Consensus 201 ~~~~ 204 (283)
..++
T Consensus 143 ~~~a 146 (149)
T 2r0j_A 143 KIYA 146 (149)
T ss_dssp HHHS
T ss_pred HHHc
Confidence 8776
No 14
>2e2c_A Ubiquitin conjugating enzyme; ubiquitin conjugation, ubiquitin carrier protein, thioester ligase; 2.00A {Spisula solidissima} SCOP: d.20.1.1
Probab=100.00 E-value=3.9e-40 Score=280.09 Aligned_cols=144 Identities=19% Similarity=0.341 Sum_probs=132.9
Q ss_pred chHHHHHHHHHHHHHHhcCCCCceEEccCCCcccEEEEEEcCCCCccCCcEEEEEEEcCCCCCCCCCceeeecCcccCCC
Q 039638 40 KSELAERIHKEWEILEKNLPSSIFVRASAERIDLMRAVIIGLEGTPYCHGLFFFDIFFPTTYPVTPPLIFYHSYGFDLNP 119 (283)
Q Consensus 40 ~~~~~kRL~kEl~~L~~~~p~gi~v~~~e~~l~~w~~~I~Gp~~TPYegG~F~f~i~fP~~YP~~PP~v~F~t~i~r~HP 119 (283)
++.+.+||++|+++|++++++||++.++++|+..|.++|.||+||||+||+|+|+|.||++||++||+|+|.|++ |||
T Consensus 7 ~~~~~~RL~kEl~~l~~~~~~~i~~~p~~~~l~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i--~HP 84 (156)
T 2e2c_A 7 RHSVSKRLQQELRTLLMSGDPGITAFPDGDNLFKWVATLDGPKDTVYESLKYKLTLEFPSDYPYKPPVVKFTTPC--WHP 84 (156)
T ss_dssp CCCHHHHHHHHHHHHHHHCCTTEEEEESSSCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEESSCC--CBT
T ss_pred chHHHHHHHHHHHHHHhCCCCCEEEEECCCCccEEEEEEECCCCCCcCCcEEEEEEECCCCCCCCCCEEEEeCCc--ccC
Confidence 456789999999999999999999999999999999999999999999999999999999999999999999999 999
Q ss_pred cccCCCceeeecccccccCCccCCCCCCCccCCcccCcccHHHHHHHHHHhhhccCCC---CCCCCCCCcCCHHHHHHHH
Q 039638 120 NLHRDGQVSLDLLTINVSHSWWNCKRDSDEKQQWNPQESNIMQVLVSIQHKVLNANPY---YCHKGHPQKSNKEVFRLNC 196 (283)
Q Consensus 120 Nv~~~G~VCLslL~~~t~~~w~~~~~~g~~~e~WsP~~~ti~~VL~sIq~Ll~~pnP~---~~e~~~~~~~n~~~f~~~~ 196 (283)
|||.+|+|||++|+ +.|+|+ ++|.+||++|++||.+|||. +.++|..+ .|.+.|.+.|
T Consensus 85 nv~~~G~iCl~iL~-----------------~~W~p~-~~i~~vL~si~~ll~~pn~~~p~n~~aa~~~-~d~~~y~~~~ 145 (156)
T 2e2c_A 85 NVDQSGNICLDILK-----------------ENWTAS-YDVRTILLSLQSLLGEPNNASPLNAQAADMW-SNQTEYKKVL 145 (156)
T ss_dssp TBCTTCBBCCGGGT-----------------TTCCTT-CCHHHHHHHHHHHTTSCCCSSCSCHHHHHHT-TCHHHHHHHH
T ss_pred CCccCceEECcccc-----------------ccCCCC-CcHHHHHHHHHHHHhCCCCCCHHHHHHHHHh-cCHHHHHHHH
Confidence 99999999999998 689999 79999999999999999864 45566677 7899999999
Q ss_pred HHHHHHHc
Q 039638 197 QAMLVMLQ 204 (283)
Q Consensus 197 ~~m~~~~~ 204 (283)
+.++..++
T Consensus 146 ~~~~~~~~ 153 (156)
T 2e2c_A 146 HEKYKTAQ 153 (156)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHhc
Confidence 98887665
No 15
>1jat_A Ubiquitin-conjugating enzyme E2-17.5 kDa; UEV, ligase; 1.60A {Saccharomyces cerevisiae} SCOP: d.20.1.1 PDB: 1jbb_A 2gmi_A 3hct_B 3hcu_B 4dhi_D 1j7d_B 4dhj_C 4dhz_F
Probab=100.00 E-value=2.4e-40 Score=281.11 Aligned_cols=143 Identities=26% Similarity=0.454 Sum_probs=134.8
Q ss_pred HHHHHHHHHHHHHHhcCCCCceEEccCCCcccEEEEEEcCCCCccCCcEEEEEEEcCCCCCCCCCceeeecCcccCCCcc
Q 039638 42 ELAERIHKEWEILEKNLPSSIFVRASAERIDLMRAVIIGLEGTPYCHGLFFFDIFFPTTYPVTPPLIFYHSYGFDLNPNL 121 (283)
Q Consensus 42 ~~~kRL~kEl~~L~~~~p~gi~v~~~e~~l~~w~~~I~Gp~~TPYegG~F~f~i~fP~~YP~~PP~v~F~t~i~r~HPNv 121 (283)
.+.+||++|++.|++++++||++.++++|++.|+++|.||+||||+||+|+|+|.||++||++||+|+|.|++ |||||
T Consensus 5 ~~~~RL~kE~~~l~~~~~~~i~~~~~~~~l~~w~~~I~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i--~HPnv 82 (155)
T 1jat_A 5 SLPKRIIKETEKLVSDPVPGITAEPHDDNLRYFQVTIEGPEQSPYEDGIFELELYLPDDYPMEAPKVRFLTKI--YHPNI 82 (155)
T ss_dssp SCCHHHHHHHHHHHHSCCTTEEEEEETTEEEEEEEEEECCTTSTTTTEEEEEEEECCTTTTTSCCEEEECSCC--CBTTB
T ss_pred HHHHHHHHHHHHHHhCCCCCEEEEECCCchhEEEEEEECCCCCCccCcEEEEEEEcCCCCCCCCCcceeeccc--ccCCC
Confidence 3568999999999999999999999999999999999999999999999999999999999999999999999 99999
Q ss_pred cCCCceeeecccccccCCccCCCCCCCccCCcccCcccHHHHHHHHHHhhhccCCC---CCCCCCCCcCCHHHHHHHHHH
Q 039638 122 HRDGQVSLDLLTINVSHSWWNCKRDSDEKQQWNPQESNIMQVLVSIQHKVLNANPY---YCHKGHPQKSNKEVFRLNCQA 198 (283)
Q Consensus 122 ~~~G~VCLslL~~~t~~~w~~~~~~g~~~e~WsP~~~ti~~VL~sIq~Ll~~pnP~---~~e~~~~~~~n~~~f~~~~~~ 198 (283)
|.+|+|||++|. +.|+|+ ++|.+||++||+||.+|||. +.++|..+..|.+.|.+.|+.
T Consensus 83 ~~~G~iCl~iL~-----------------~~W~p~-~~i~~vl~~i~~ll~~p~~~~p~n~~aa~~~~~~~~~f~~~~r~ 144 (155)
T 1jat_A 83 DRLGRICLDVLK-----------------TNWSPA-LQIRTVLLSIQALLASPNPNDPLANDVAEDWIKNEQGAKAKARE 144 (155)
T ss_dssp CTTCCBCCGGGT-----------------TTCCTT-CCHHHHHHHHHHHHHSCCTTSTTCCTTHHHHHHCHHHHHHHHHH
T ss_pred CCCCEEEchhhc-----------------cCCCCC-CCHHHHHHHHHHHHhCCCCCCcccHHHHHHHHHCHHHHHHHHHH
Confidence 999999999998 689999 79999999999999999764 677888888999999999999
Q ss_pred HHHHHc
Q 039638 199 MLVMLQ 204 (283)
Q Consensus 199 m~~~~~ 204 (283)
++..++
T Consensus 145 ~~~~~a 150 (155)
T 1jat_A 145 WTKLYA 150 (155)
T ss_dssp HHHHHS
T ss_pred HHHHhc
Confidence 998877
No 16
>1ayz_A UBC2, ubiquitin-conjugating enzyme RAD6; ubiquitin conjugation; 2.60A {Saccharomyces cerevisiae} SCOP: d.20.1.1
Probab=100.00 E-value=2.6e-40 Score=285.08 Aligned_cols=144 Identities=23% Similarity=0.440 Sum_probs=128.7
Q ss_pred hHHHHHHHHHHHHHHhcCCCCceEEccCCCcccEEEEEEcCCCCccCCcEEEEEEEcCCCCCCCCCceeeecCcccCCCc
Q 039638 41 SELAERIHKEWEILEKNLPSSIFVRASAERIDLMRAVIIGLEGTPYCHGLFFFDIFFPTTYPVTPPLIFYHSYGFDLNPN 120 (283)
Q Consensus 41 ~~~~kRL~kEl~~L~~~~p~gi~v~~~e~~l~~w~~~I~Gp~~TPYegG~F~f~i~fP~~YP~~PP~v~F~t~i~r~HPN 120 (283)
+.+.+||++|++.|++++|+||++.+.++|+..|+++|.||+||||+||+|+|+|.||++||++||+|+|.|++ ||||
T Consensus 3 ~~a~~RL~kEl~~l~~~~~~gi~~~p~~~nl~~W~~~I~GP~~tpYegG~f~l~i~fp~~YP~~PP~v~F~t~i--~HPN 80 (169)
T 1ayz_A 3 TPARRRLMRDFKRMKEDAPPGVSASPLPDNVMVWNAMIIGPADTPYEDGTFRLLLEFDEEYPNKPPHVKFLSEM--FHPN 80 (169)
T ss_dssp CHHHHHHHHHHHHHHHSCCTTEEEEEETTEEEEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSCC--CCTT
T ss_pred hHHHHHHHHHHHHHHhCCCCCEEEEecCCccccceEEEECCCCCCcCCCEEEEEEECcccCCCCCCccccccCC--ccCC
Confidence 35789999999999999999999999999999999999999999999999999999999999999999999999 9999
Q ss_pred ccCCCceeeecccccccCCccCCCCCCCccCCcccCcccHHHHHHHHHHhhhccCCC---CCCCCCCCcCCHHHHHHHHH
Q 039638 121 LHRDGQVSLDLLTINVSHSWWNCKRDSDEKQQWNPQESNIMQVLVSIQHKVLNANPY---YCHKGHPQKSNKEVFRLNCQ 197 (283)
Q Consensus 121 v~~~G~VCLslL~~~t~~~w~~~~~~g~~~e~WsP~~~ti~~VL~sIq~Ll~~pnP~---~~e~~~~~~~n~~~f~~~~~ 197 (283)
|+.+|+|||++|+ +.|+|+ ++|.+||++||+||.+|+|. +.++|..+..|++.|.+.|+
T Consensus 81 I~~~G~ICl~iL~-----------------~~WsP~-~~i~~vL~si~~ll~~Pn~~~P~n~~aa~~~~~d~~~y~~~~r 142 (169)
T 1ayz_A 81 VYANGEICLDILQ-----------------NRWTPT-YDVASILTSIQSLFNDPNPASPANVEAATLFKDHKSQYVKRVK 142 (169)
T ss_dssp BCTTSBBCCGGGT-----------------TTCCTT-CCHHHHHHHHHHHHTCCCCSSCSSHHHHHHHHHCHHHHHHHHH
T ss_pred CCCCCeEeehhhc-----------------cCCCCc-CcHHHHHHHHHHHHhCCCCCcHHHHHHHHHHHHCHHHHHHHHH
Confidence 9999999999998 689999 79999999999999999874 33444555667777777777
Q ss_pred HHHHHHc
Q 039638 198 AMLVMLQ 204 (283)
Q Consensus 198 ~m~~~~~ 204 (283)
.++..++
T Consensus 143 ~~~~~~a 149 (169)
T 1ayz_A 143 ETVEKSW 149 (169)
T ss_dssp HHHHHHH
T ss_pred HHHHHHc
Confidence 6665555
No 17
>3k9o_A Ubiquitin-conjugating enzyme E2 K; E2-25K, complex structure, ATP-binding, isopeptide BO ligase, nucleotide-binding, UBL conjugation pathway; 1.80A {Homo sapiens} PDB: 3k9p_A 1yla_A 2o25_A
Probab=100.00 E-value=3.4e-40 Score=291.17 Aligned_cols=174 Identities=25% Similarity=0.364 Sum_probs=149.3
Q ss_pred hHHHHHHHHHHHHHHhc---CCCCceEEccCCCcccEEEEEEcCCCCccCCcEEEEEEEcCCCCCCCCCceeeecCcccC
Q 039638 41 SELAERIHKEWEILEKN---LPSSIFVRASAERIDLMRAVIIGLEGTPYCHGLFFFDIFFPTTYPVTPPLIFYHSYGFDL 117 (283)
Q Consensus 41 ~~~~kRL~kEl~~L~~~---~p~gi~v~~~e~~l~~w~~~I~Gp~~TPYegG~F~f~i~fP~~YP~~PP~v~F~t~i~r~ 117 (283)
..+.+||++|+++|+++ ++.||++.+.++|++.|+++|.||+||||+||+|+|+|.||++||++||+|+|.|++ |
T Consensus 4 ~~a~~Rl~kEl~~l~~~~~~~~~~i~~~~~~~nl~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~t~i--~ 81 (201)
T 3k9o_A 4 NIAVQRIKREFKEVLKSEETSKNQIKVDLVDENFTELRGEIAGPPDTPYEGGRYQLEIKIPETYPFNPPKVRFITKI--W 81 (201)
T ss_dssp CTTHHHHHHHHHHHHTCHHHHTTSEEEEECSTTSSEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSCC--C
T ss_pred HHHHHHHHHHHHHHHhCCCCCCCCEEEEECCCCccEEEEEEECCCCCCCCCCEEEEEEECCCcCCCCCCccccccCc--c
Confidence 35689999999999987 378999999999999999999999999999999999999999999999999999999 9
Q ss_pred CCccc-CCCceeeecccccccCCccCCCCCCCccCCcccCcccHHHHHHHHHHhhhccCCC---CCCCCCCCcCCHHHHH
Q 039638 118 NPNLH-RDGQVSLDLLTINVSHSWWNCKRDSDEKQQWNPQESNIMQVLVSIQHKVLNANPY---YCHKGHPQKSNKEVFR 193 (283)
Q Consensus 118 HPNv~-~~G~VCLslL~~~t~~~w~~~~~~g~~~e~WsP~~~ti~~VL~sIq~Ll~~pnP~---~~e~~~~~~~n~~~f~ 193 (283)
||||+ .+|+|||++|. ++|+|+ ++|.+||++||+||.+|||. +.++|..+..|++.|.
T Consensus 82 HPnv~~~~G~iCl~iL~-----------------~~W~p~-~~i~~vL~~i~~ll~~p~p~~p~n~~aa~~~~~~~~~f~ 143 (201)
T 3k9o_A 82 HPNISSVTGAICLDILK-----------------DQWAAA-MTLRTVLLSLQALLAAAEPDDPQDAVVANQYKQNPEMFK 143 (201)
T ss_dssp BTTBCTTTCBBCCGGGT-----------------TTCCTT-CCHHHHHHHHHHHHHSCCTTSCSCHHHHHHHHHCHHHHH
T ss_pred cCCCcCCCCeeeCcccc-----------------cCCCCC-CCHHHHHHHHHHHhcCCCCCCcccHHHHHHHHHCHHHHH
Confidence 99999 69999999997 689999 79999999999999999975 4567778889999999
Q ss_pred HHHHHHHHHHcccccCCC-C----cchHHHHHHhhhhcCHHHHHHHHHHh
Q 039638 194 LNCQAMLVMLQPHMQFKQ-P----HMQFKHLVQGHFRNRAHQILQIHKAE 238 (283)
Q Consensus 194 ~~~~~m~~~~~~~l~~pp-~----~~~fe~~v~~hf~~~~~~il~~~~~~ 238 (283)
++|+.|+..++ ..| . .+..+.++..+|.+...........|
T Consensus 144 ~~a~~~~~~~a----~~~~~~~~~eekV~~l~~MGf~~~~a~~AL~~~~w 189 (201)
T 3k9o_A 144 QTARLWAHVYA----GAPVSSPEYTKKIENLCAMGFDRNAVIVALSSKSW 189 (201)
T ss_dssp HHHHHHHHHHH----CCCCCCHHHHHHHHHHHTTTCCHHHHHHHHHHTTT
T ss_pred HHHHHHHHHhc----ccccccchhHHHHHHHHHcCCCHHHHHHHHHHcCC
Confidence 99999999998 444 1 23455666667776554433333333
No 18
>2aak_A UBC1, ubiquitin conjugating enzyme; ubiquitin conjugation, ligase; 2.40A {Arabidopsis thaliana} SCOP: d.20.1.1 PDB: 1jas_A 2y4w_A 2yb6_A 2ybf_A 1q34_A 1z3d_A
Probab=100.00 E-value=6.4e-40 Score=277.55 Aligned_cols=144 Identities=26% Similarity=0.474 Sum_probs=131.1
Q ss_pred hHHHHHHHHHHHHHHhcCCCCceEEccCCCcccEEEEEEcCCCCccCCcEEEEEEEcCCCCCCCCCceeeecCcccCCCc
Q 039638 41 SELAERIHKEWEILEKNLPSSIFVRASAERIDLMRAVIIGLEGTPYCHGLFFFDIFFPTTYPVTPPLIFYHSYGFDLNPN 120 (283)
Q Consensus 41 ~~~~kRL~kEl~~L~~~~p~gi~v~~~e~~l~~w~~~I~Gp~~TPYegG~F~f~i~fP~~YP~~PP~v~F~t~i~r~HPN 120 (283)
+.+.+||++|+++|++++++||++.+.++|+..|+++|.||+||||+||+|+|+|.||++||++||+|+|.|++ ||||
T Consensus 3 ~~a~~RL~~E~~~l~~~~~~~i~~~~~~~~l~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i--~HPn 80 (152)
T 2aak_A 3 TPARKRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLSLQFSEDYPNKPPTVRFVSRM--FHPN 80 (152)
T ss_dssp CHHHHHHHHHHHHHHHSCCTTEEEEEETTEEEEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSCC--CCTT
T ss_pred hHHHHHHHHHHHHHHhCCCCCEEEEeCCCCccEEEEEEeCCCCCCccCCEEEEEEECCCCCCCCCCEEEEecCc--ccCC
Confidence 35789999999999999999999999999999999999999999999999999999999999999999999999 9999
Q ss_pred ccCCCceeeecccccccCCccCCCCCCCccCCcccCcccHHHHHHHHHHhhhccCCC---CCCCCCCCcCCHHHHHHHHH
Q 039638 121 LHRDGQVSLDLLTINVSHSWWNCKRDSDEKQQWNPQESNIMQVLVSIQHKVLNANPY---YCHKGHPQKSNKEVFRLNCQ 197 (283)
Q Consensus 121 v~~~G~VCLslL~~~t~~~w~~~~~~g~~~e~WsP~~~ti~~VL~sIq~Ll~~pnP~---~~e~~~~~~~n~~~f~~~~~ 197 (283)
||.+|+|||++|. +.|+|+ ++|.+||++|++||.+|+|. +.++|..+..|.+.|.+.|+
T Consensus 81 v~~~G~iCl~iL~-----------------~~W~p~-~~i~~vl~~i~~ll~~p~~~~p~n~~aa~~~~~~~~~y~~~~~ 142 (152)
T 2aak_A 81 IYADGSICLDILQ-----------------NQWSPI-YDVAAILTSIQSLLCDPNPNSPANSEAARMYSESKREYNRRVR 142 (152)
T ss_dssp BCTTSBBCCGGGT-----------------TSCCTT-CCHHHHHHHHHHHHTSCCTTSCSSHHHHHHHHHCHHHHHHHHH
T ss_pred CCCCCEEechhhc-----------------CCCCCC-CcHHHHHHHHHHHHhCCCCCccccHHHHHHHHHCHHHHHHHHH
Confidence 9999999999998 689999 79999999999999999875 33445566778888888888
Q ss_pred HHHHHHc
Q 039638 198 AMLVMLQ 204 (283)
Q Consensus 198 ~m~~~~~ 204 (283)
.++..++
T Consensus 143 ~~~~~~a 149 (152)
T 2aak_A 143 DVVEQSW 149 (152)
T ss_dssp HHHHHHC
T ss_pred HHHHHHc
Confidence 8776665
No 19
>1fxt_A Ubiquitin-conjugating enzyme E2-24 kDa; ligase; NMR {Saccharomyces cerevisiae} SCOP: d.20.1.1 PDB: 1fzy_A
Probab=100.00 E-value=2e-40 Score=279.86 Aligned_cols=142 Identities=25% Similarity=0.472 Sum_probs=126.7
Q ss_pred HHHHHHHHHHHHHhcCCCCceEEccCC-CcccEEEEEEcCCCCccCCcEEEEEEEcCCCCCCCCCceeeecCcccCCCcc
Q 039638 43 LAERIHKEWEILEKNLPSSIFVRASAE-RIDLMRAVIIGLEGTPYCHGLFFFDIFFPTTYPVTPPLIFYHSYGFDLNPNL 121 (283)
Q Consensus 43 ~~kRL~kEl~~L~~~~p~gi~v~~~e~-~l~~w~~~I~Gp~~TPYegG~F~f~i~fP~~YP~~PP~v~F~t~i~r~HPNv 121 (283)
+.+||++|+++|++++++||++.+.++ |++.|+++|.||+||||+||+|+|+|.||++||++||+|+|.|++ |||||
T Consensus 2 ~~~RL~~El~~l~~~~~~~i~~~~~~~~~l~~w~~~I~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i--~HPni 79 (149)
T 1fxt_A 2 RAKRIMKEIQAVKDDPAAHITLEFVSESDIHHLKGTFLGPPGTPYEGGKFVVDIEVPMEYPFKPPKMQFDTKV--YHPNI 79 (149)
T ss_dssp CHHHHHHHHHHHHHCGGGCCEEEESSSSCSSEEEEEEECCSSSTTCSSEEEEEEECCTTTTSSCCEEEESSCC--CBTTB
T ss_pred hHHHHHHHHHHHHhCCCCCEEEEECCCCCceEEEEEEECCCCCCcCCcEEEEEEECCCCCCCCCCEEEEeCCC--ccCCC
Confidence 468999999999999999999999877 999999999999999999999999999999999999999999999 99999
Q ss_pred cC-CCceeeecccccccCCccCCCCCCCccCCcccCcccHHHHHHHHHHhhhccCCC---CCCCCCCCcCCHHHHHHHHH
Q 039638 122 HR-DGQVSLDLLTINVSHSWWNCKRDSDEKQQWNPQESNIMQVLVSIQHKVLNANPY---YCHKGHPQKSNKEVFRLNCQ 197 (283)
Q Consensus 122 ~~-~G~VCLslL~~~t~~~w~~~~~~g~~~e~WsP~~~ti~~VL~sIq~Ll~~pnP~---~~e~~~~~~~n~~~f~~~~~ 197 (283)
|. +|+|||++|+ ++|+|+ ++|.+||++||+||.+|+|. +.++|..+..|++.|.+.|+
T Consensus 80 ~~~~G~iCl~iL~-----------------~~W~p~-~~i~~vl~~i~~ll~~p~~~~p~n~~aa~~~~~d~~~f~~~a~ 141 (149)
T 1fxt_A 80 SSVTGAICLDILK-----------------NAWSPV-ITLKSALISLQALLQSPEPNDPQDAEVAQHYLRDRESFNKTAA 141 (149)
T ss_dssp CSSSCCBCCHHHH-----------------TSCCTT-CCHHHHHHHHHHHHHSCCSSSCSSHHHHHHHHHCSSHHHHHHH
T ss_pred cCCCCeEeCCcCC-----------------CCCCCC-CcHHHHHHHHHHHHhCCCCCCcccHHHHHHHHHCHHHHHHHHH
Confidence 97 9999999998 689999 79999999999999999874 33444555667777777777
Q ss_pred HHHHHHc
Q 039638 198 AMLVMLQ 204 (283)
Q Consensus 198 ~m~~~~~ 204 (283)
.++..++
T Consensus 142 ~~~~~~a 148 (149)
T 1fxt_A 142 LWTRLYA 148 (149)
T ss_dssp HHHHHHC
T ss_pred HHHHHhc
Confidence 7665553
No 20
>3rz3_A Ubiquitin-conjugating enzyme E2 R1; ubiquitin conjugating enzyme domain, E2 domain, ligase-ligas inhibitor complex; HET: U94; 2.30A {Homo sapiens} PDB: 2ob4_A
Probab=100.00 E-value=5.6e-39 Score=279.82 Aligned_cols=170 Identities=18% Similarity=0.282 Sum_probs=130.2
Q ss_pred chHHHHHHHHHHHHHHhcCCCCceEE-ccCCCcccEEEEEEcCCCCccCCcEEEEEEEcCCCCCCCCCceeeecCcccCC
Q 039638 40 KSELAERIHKEWEILEKNLPSSIFVR-ASAERIDLMRAVIIGLEGTPYCHGLFFFDIFFPTTYPVTPPLIFYHSYGFDLN 118 (283)
Q Consensus 40 ~~~~~kRL~kEl~~L~~~~p~gi~v~-~~e~~l~~w~~~I~Gp~~TPYegG~F~f~i~fP~~YP~~PP~v~F~t~i~r~H 118 (283)
++++.+||++|+++|++++++||++. ++++|++.|+++|.||+||||+||+|+|+|.||++||++||+|+|.|++ ||
T Consensus 5 ~~~a~kRL~kEl~~l~~~~~~gi~~~~~~~~nl~~W~~~I~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i--~H 82 (183)
T 3rz3_A 5 SPSSQKALLLELKGLQEEPVEGFRVTLVDEGDLYNWEVAIFGPPNTYYEGGYFKARLKFPIDYPYSPPAFRFLTKM--WH 82 (183)
T ss_dssp CCHHHHHHHHHHHHHHHSCCTTEEEEECTTCCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEESSCC--CC
T ss_pred chHHHHHHHHHHHHHHhCCCCCEEEEecCccchhheeeeeeCCCCCCCCCCeEEEEEECCCCCCCCCCeeEecCCC--cc
Confidence 45789999999999999999999999 7889999999999999999999999999999999999999999999999 99
Q ss_pred CcccCCCceeeecccccccCCccCCCCCCCccCCcccCcccHHHHHHHHHHhhhccCCCCCCCCCCCcCCHHHHHHHHHH
Q 039638 119 PNLHRDGQVSLDLLTINVSHSWWNCKRDSDEKQQWNPQESNIMQVLVSIQHKVLNANPYYCHKGHPQKSNKEVFRLNCQA 198 (283)
Q Consensus 119 PNv~~~G~VCLslL~~~t~~~w~~~~~~g~~~e~WsP~~~ti~~VL~sIq~Ll~~pnP~~~e~~~~~~~n~~~f~~~~~~ 198 (283)
||||.+|+|||++|+.+.+|.|+ ++...++|+|+ ++|.+||++||+||.+|||. +| .|.++...
T Consensus 83 PnV~~~G~iClsiL~~~~~~~~~----~~~~~~~W~p~-~~i~~vL~si~~ll~~Pn~~--~p-----~n~~aa~~---- 146 (183)
T 3rz3_A 83 PNIYETGDVCISILHPPVDDPQS----GELPSERWNPT-QNVRTILLSVISLLNEPNTF--SP-----ANVDASVM---- 146 (183)
T ss_dssp TTBCTTSBBCCTTC------------------CCCCTT-CCHHHHHHHHHHHHHSCCCS--SC-----SSHHHHHH----
T ss_pred CCCCCCCcEehhhcCcccccccc----cccccCCCCCc-CcHHHHHHHHHHHHhCCCCC--Cc-----ccHHHHHH----
Confidence 99999999999999843344444 44556899999 79999999999999999984 33 35554211
Q ss_pred HHHHHcccccCCCCcchHHHHHHhhhhcCHHHH
Q 039638 199 MLVMLQPHMQFKQPHMQFKHLVQGHFRNRAHQI 231 (283)
Q Consensus 199 m~~~~~~~l~~pp~~~~fe~~v~~hf~~~~~~i 231 (283)
....++.- ..+ +.|++.|++..++....+
T Consensus 147 -~~~~~~~~-~~~--~~y~~~v~~~v~~s~~~~ 175 (183)
T 3rz3_A 147 -YRKWKESK-GKD--REYTDIIRKQVLGTKVDA 175 (183)
T ss_dssp -HHHHHHTT-TCC--CHHHHHHHHHHHHHHHHH
T ss_pred -HHhccccc-ccH--HHHHHHHHHHHHHHHHHH
Confidence 11111000 123 678888877776665544
No 21
>3rcz_B SUMO-conjugating enzyme UBC9; SUMO-like domain, protein:protein interaction, protein ligase complex; HET: DNA; 1.90A {Schizosaccharomyces pombe} SCOP: d.20.1.1
Probab=100.00 E-value=8.4e-40 Score=280.36 Aligned_cols=148 Identities=22% Similarity=0.327 Sum_probs=132.3
Q ss_pred CchHHHHHHHHHHHHHHhcCCCCceEEccCC-----CcccEEEEEEcCCCCccCCcEEEEEEEcCCCCCCCCCceeeecC
Q 039638 39 PKSELAERIHKEWEILEKNLPSSIFVRASAE-----RIDLMRAVIIGLEGTPYCHGLFFFDIFFPTTYPVTPPLIFYHSY 113 (283)
Q Consensus 39 ~~~~~~kRL~kEl~~L~~~~p~gi~v~~~e~-----~l~~w~~~I~Gp~~TPYegG~F~f~i~fP~~YP~~PP~v~F~t~ 113 (283)
-+..+.+||++|+++|++++|+||++.+.++ |+..|.++|.||+||||+||+|+|+|.||++||++||+|+|.|+
T Consensus 7 ~~~~~~~RL~kEl~~l~~~~p~gi~~~p~~~~d~~~nl~~W~~~I~Gp~~Tpyegg~f~l~i~fp~~YP~~pP~v~F~t~ 86 (163)
T 3rcz_B 7 HSSLCKTRLQEERKQWRRDHPFGFYAKPCKSSDGGLDLMNWKVGIPGKPKTSWEGGLYKLTMAFPEEYPTRPPKCRFTPP 86 (163)
T ss_dssp --CHHHHHHHHHHHHHHHSCCTTCEEEEEECTTSSEEEEEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSC
T ss_pred CcHHHHHHHHHHHHHHHhCCCCCEEEEEccCcCCCCCccEEEEEEECCCCCCcCCCEEEEEEECCCCCCCCCCEEEEeCC
Confidence 3667899999999999999999999998765 99999999999999999999999999999999999999999999
Q ss_pred cccCCCcccCCCceeeecccccccCCccCCCCCCCccCCcccCcccHHHHHHHHHHhhhccCCC---CCCCCCCCcCCHH
Q 039638 114 GFDLNPNLHRDGQVSLDLLTINVSHSWWNCKRDSDEKQQWNPQESNIMQVLVSIQHKVLNANPY---YCHKGHPQKSNKE 190 (283)
Q Consensus 114 i~r~HPNv~~~G~VCLslL~~~t~~~w~~~~~~g~~~e~WsP~~~ti~~VL~sIq~Ll~~pnP~---~~e~~~~~~~n~~ 190 (283)
+ ||||||.+|+|||++|+ . .++|+|+ ++|.+||++|++||.+|+|. +.++|..+..|++
T Consensus 87 i--~HPnV~~~G~iCl~iL~--~-------------~~~W~p~-~ti~~vL~~i~~ll~~P~~~~p~n~~aa~~~~~d~~ 148 (163)
T 3rcz_B 87 L--FHPNVYPSGTVCLSILN--E-------------EEGWKPA-ITIKQILLGIQDLLDDPNIASPAQTEAYTMFKKDKV 148 (163)
T ss_dssp C--CSTTBCTTSBBCCGGGC--T-------------TTTCCTT-CCHHHHHHHHHHHHTSCCTTSCSCHHHHHHHHHCHH
T ss_pred C--ccCCCCCCCcEeccccC--C-------------CCCcCCc-CcHHHHHHHHHHHHhCCCCCCccCHHHHHHHHHCHH
Confidence 8 99999999999999998 2 1579999 79999999999999999875 4455566778888
Q ss_pred HHHHHHHHHHHHHc
Q 039638 191 VFRLNCQAMLVMLQ 204 (283)
Q Consensus 191 ~f~~~~~~m~~~~~ 204 (283)
.|.+.|+.++..++
T Consensus 149 ~y~~~~r~~~~~ya 162 (163)
T 3rcz_B 149 EYEKRVRAQARENA 162 (163)
T ss_dssp HHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHhC
Confidence 88888888877664
No 22
>3e46_A Ubiquitin-conjugating enzyme E2-25 kDa; huntington interacting, ligase, alternative splicing, cytoplasm, UBL conjugation, UBL conjugation pathway; 1.86A {Homo sapiens} SCOP: a.5.2.1 d.20.1.1 PDB: 3f92_A*
Probab=100.00 E-value=2.4e-39 Score=295.13 Aligned_cols=176 Identities=24% Similarity=0.358 Sum_probs=154.3
Q ss_pred CchHHHHHHHHHHHHHHhc---CCCCceEEccCCCcccEEEEEEcCCCCccCCcEEEEEEEcCCCCCCCCCceeeecCcc
Q 039638 39 PKSELAERIHKEWEILEKN---LPSSIFVRASAERIDLMRAVIIGLEGTPYCHGLFFFDIFFPTTYPVTPPLIFYHSYGF 115 (283)
Q Consensus 39 ~~~~~~kRL~kEl~~L~~~---~p~gi~v~~~e~~l~~w~~~I~Gp~~TPYegG~F~f~i~fP~~YP~~PP~v~F~t~i~ 115 (283)
-+..+.+||++|+++|+++ ++.||++.+.++|++.|.++|.||+||||+||+|+|+|.||++||++||+|+|.|++
T Consensus 54 Ms~~a~~RL~kEl~~l~~~~~~~~~gi~v~p~~dnl~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~V~F~T~i- 132 (253)
T 3e46_A 54 MANIAVQRIKREFKEVLKSEETSKNQIKVDLVDENFTELRGEIAGPPDTPYEGGRYQLEIKIPETYPFNPPKVRFITKI- 132 (253)
T ss_dssp CCHHHHHHHHHHHHHHHHCHHHHTTSEEEEECSTTSSEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEESSCC-
T ss_pred ccHHHHHHHHHHHHHHHhCCCCCCCCEEEEECCCcccEEEEEEECCCCCCcCCCEEEEEEECCCCCCCCCCeeeecCCC-
Confidence 3567899999999999987 478999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCccc-CCCceeeecccccccCCccCCCCCCCccCCcccCcccHHHHHHHHHHhhhccCCC---CCCCCCCCcCCHHH
Q 039638 116 DLNPNLH-RDGQVSLDLLTINVSHSWWNCKRDSDEKQQWNPQESNIMQVLVSIQHKVLNANPY---YCHKGHPQKSNKEV 191 (283)
Q Consensus 116 r~HPNv~-~~G~VCLslL~~~t~~~w~~~~~~g~~~e~WsP~~~ti~~VL~sIq~Ll~~pnP~---~~e~~~~~~~n~~~ 191 (283)
|||||| .+|+|||++|. ++|+|+ ++|.+||++||+||.+|||. +.++|..+..|++.
T Consensus 133 -~HPNV~~~~G~ICL~iL~-----------------~~WsP~-~ti~~vL~sI~~ll~~pnp~~Pln~eaa~l~~~d~~~ 193 (253)
T 3e46_A 133 -WHPNISSVTGAICLDILK-----------------DQWAAA-MTLRTVLLSLQALLAAAEPDDPQDAVVANQYKQNPEM 193 (253)
T ss_dssp -CBTTBCTTTCBBCCGGGT-----------------TCCCTT-CCHHHHHHHHHHHHHSCCTTSCSCHHHHHHHHHCHHH
T ss_pred -ccCCccCCCCeeeccccc-----------------CCCCCC-CCHHHHHHHHHHHhcCCCCCChhhHHHHHHHHHCHHH
Confidence 999999 69999999997 689999 79999999999999999975 45667788899999
Q ss_pred HHHHHHHHHHHHcccccCCCC-----cchHHHHHHhhhhcCHHHHHHHHHHh
Q 039638 192 FRLNCQAMLVMLQPHMQFKQP-----HMQFKHLVQGHFRNRAHQILQIHKAE 238 (283)
Q Consensus 192 f~~~~~~m~~~~~~~l~~pp~-----~~~fe~~v~~hf~~~~~~il~~~~~~ 238 (283)
|.++|+.|+..++ ..|. .+..+.++..+|.............|
T Consensus 194 f~~~ar~~t~~yA----~~~~~~~~~~~~v~~l~~mgf~~~~~~~al~~~nW 241 (253)
T 3e46_A 194 FKQTARLWAHVYA----GAPVSSPEYTKKIENLCAAGFDRNAVIVALSSKSW 241 (253)
T ss_dssp HHHHHHHHHHHHH----CCSCCCHHHHHHHHHHHHTTCCHHHHHHHHHHTTT
T ss_pred HHHHHHHHHHHhc----ccccCcchHHHHHHHHHHcCCCHHHHHHHHHHcCC
Confidence 9999999999998 5441 24456677778877666655555555
No 23
>3fn1_B NEDD8-conjugating enzyme UBE2F; ligase, ATP-binding, cell cycle, nucleotide-binding, UBL CON pathway; 2.50A {Homo sapiens} PDB: 2edi_A
Probab=100.00 E-value=3e-39 Score=277.30 Aligned_cols=155 Identities=21% Similarity=0.286 Sum_probs=136.8
Q ss_pred cCCCCchHHHHHHHHHHHHHHhcCCCCceEEc-cCCCcccEEEEEEcCCCCccCCcEEEEEEEcCCCCCCCCCceeeecC
Q 039638 35 ININPKSELAERIHKEWEILEKNLPSSIFVRA-SAERIDLMRAVIIGLEGTPYCHGLFFFDIFFPTTYPVTPPLIFYHSY 113 (283)
Q Consensus 35 ~~~~~~~~~~kRL~kEl~~L~~~~p~gi~v~~-~e~~l~~w~~~I~Gp~~TPYegG~F~f~i~fP~~YP~~PP~v~F~t~ 113 (283)
......+.+.+||++|+++|++++|+||++.+ +++++..|.++| ||++|||+||+|+|+|.||++||++||+|+|.|+
T Consensus 7 ~~~~~~s~~~~RL~kEl~~l~~~~~~gi~~~~~~~~~l~~w~~~i-gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~t~ 85 (167)
T 3fn1_B 7 DSTRRVSVRDKLLVKEVAELEANLPCTCKVHFPDPNKLHCFQLTV-TPDEGYYQGGKFQFETEVPDAYNMVPPKVKCLTK 85 (167)
T ss_dssp -CCCCCCHHHHHHHHHHHHHGGGSCTTEEEECSSSSCTTEEEEEE-CCSSSTTTTCCEEEEEECCTTBTTBCCEEEECSC
T ss_pred CCccchhHHHHHHHHHHHHHHhCCCCCEEEEeCCCCcceeEEEEE-CCCCCccCCCEEEEEEECCCCCCCCCCeeEecCC
Confidence 34567788999999999999999999999985 568899999998 9999999999999999999999999999999999
Q ss_pred cccCCCcccCCCceeeecccccccCCccCCCCCCCccCCcccCcccHHHHHHHHHHhhhc-cCCC---CCCCCCCCcCCH
Q 039638 114 GFDLNPNLHRDGQVSLDLLTINVSHSWWNCKRDSDEKQQWNPQESNIMQVLVSIQHKVLN-ANPY---YCHKGHPQKSNK 189 (283)
Q Consensus 114 i~r~HPNv~~~G~VCLslL~~~t~~~w~~~~~~g~~~e~WsP~~~ti~~VL~sIq~Ll~~-pnP~---~~e~~~~~~~n~ 189 (283)
+ ||||||.+|+|||++|+ + | |...++|+|+ ++|.+||++||+||.+ |||. +.++|..+..|.
T Consensus 86 i--~HPnv~~~G~iCl~iL~--~---~------~~~~~~W~p~-~~i~~vl~~i~~ll~~~pn~~~p~n~eaa~~~~~~~ 151 (167)
T 3fn1_B 86 I--WHPNITETGEICLSLLR--E---H------SIDGTGWAPT-RTLKDVVWGLNSLFTDLLNFDDPLNIEAAEHHLRDK 151 (167)
T ss_dssp C--CCSSBCTTCCBCCGGGS--B---C------SSSTTSBCTT-CCHHHHHHHHHHTTTTTCCSSSCSCHHHHHHHHHCH
T ss_pred c--ccCCCCCCCEEechhhc--c---C------CCCCCCCCCc-CcHHHHHHHHHHHHcCCCCCCcchhHHHHHHHHHCH
Confidence 9 99999999999999998 4 3 4456899999 7999999999999999 5754 556667777888
Q ss_pred HHHHHHHHHHHHHHc
Q 039638 190 EVFRLNCQAMLVMLQ 204 (283)
Q Consensus 190 ~~f~~~~~~m~~~~~ 204 (283)
+.|.+.|+.++..++
T Consensus 152 ~~f~~~~r~~~~~~A 166 (167)
T 3fn1_B 152 EDFRNKVDDYIKRYA 166 (167)
T ss_dssp HHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHhc
Confidence 888888888877664
No 24
>3bzh_A Ubiquitin-conjugating enzyme E2 E1; structural genomics consortium, ubiquitin-conjuga enzyme, ligase, SGC, UBL conjugation pathway; 1.60A {Homo sapiens} PDB: 1y6l_A
Probab=100.00 E-value=3.3e-39 Score=283.90 Aligned_cols=144 Identities=26% Similarity=0.430 Sum_probs=132.6
Q ss_pred hHHHHHHHHHHHHHHhcCCCCceEEccCCCcccEEEEEEcCCCCccCCcEEEEEEEcCCCCCCCCCceeeecCcccCCCc
Q 039638 41 SELAERIHKEWEILEKNLPSSIFVRASAERIDLMRAVIIGLEGTPYCHGLFFFDIFFPTTYPVTPPLIFYHSYGFDLNPN 120 (283)
Q Consensus 41 ~~~~kRL~kEl~~L~~~~p~gi~v~~~e~~l~~w~~~I~Gp~~TPYegG~F~f~i~fP~~YP~~PP~v~F~t~i~r~HPN 120 (283)
+.+.+||++|+++|++++|+||++.+.++|++.|+++|.||+||||+||+|+|+|.||++||++||+|+|.|++ ||||
T Consensus 47 s~a~~RL~kEl~~l~~~~~~gi~~~p~~~nl~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~V~F~T~i--~HPN 124 (194)
T 3bzh_A 47 STSAKRIQKELADITLDPPPNCSAGPKGDNIYEWRSTILGPPGSVYEGGVFFLDITFTPEYPFKPPKVTFRTRI--YHCN 124 (194)
T ss_dssp HHHHHHHHHHHHHHHHSCCTTEEEEESSSCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSCC--CBTT
T ss_pred cHHHHHHHHHHHHHHhCCCCCceeecccCccccceEEEeCCCCCCccCCEEEEEEECCCcCCCCCccccccCCC--ccce
Confidence 56889999999999999999999999999999999999999999999999999999999999999999999999 9999
Q ss_pred ccCCCceeeecccccccCCccCCCCCCCccCCcccCcccHHHHHHHHHHhhhccCCC---CCCCCCCCcCCHHHHHHHHH
Q 039638 121 LHRDGQVSLDLLTINVSHSWWNCKRDSDEKQQWNPQESNIMQVLVSIQHKVLNANPY---YCHKGHPQKSNKEVFRLNCQ 197 (283)
Q Consensus 121 v~~~G~VCLslL~~~t~~~w~~~~~~g~~~e~WsP~~~ti~~VL~sIq~Ll~~pnP~---~~e~~~~~~~n~~~f~~~~~ 197 (283)
||.+|+|||++|. +.|+|+ ++|.+||++|++||.+|||+ +.++|..+..|.+.|.+.|+
T Consensus 125 V~~~G~ICL~iL~-----------------~~WsP~-~ti~~vL~sI~~ll~~pnp~~Pln~~aa~l~~~d~~~f~~~ar 186 (194)
T 3bzh_A 125 INSQGVICLDILK-----------------DNWSPA-LTISKVLLSICSLLTDCNPADPLVGSIATQYMTNRAEHDRMAR 186 (194)
T ss_dssp BCTTCBBCCGGGT-----------------TTCCTT-CCHHHHHHHHHHHHHSCCTTSCSCHHHHHHHHHCHHHHHHHHH
T ss_pred ECCCCceechhhh-----------------ccCCCc-CcHHHHHHHHHHHHhCCCCccchhHHHHHHHHHCHHHHHHHHH
Confidence 9999999999998 689999 79999999999999999875 34455667788888888888
Q ss_pred HHHHHHc
Q 039638 198 AMLVMLQ 204 (283)
Q Consensus 198 ~m~~~~~ 204 (283)
.|+..++
T Consensus 187 ~~t~~ya 193 (194)
T 3bzh_A 187 QWTKRYA 193 (194)
T ss_dssp HHHHHHC
T ss_pred HHHHHhh
Confidence 8877654
No 25
>2bep_A Ubiquitin-conjugating enzyme E2-25 kDa; ligase, E2 conjugating enzyme, protein degradatio structural proteomics in europe, spine; 1.8A {Bos taurus} SCOP: d.20.1.1 PDB: 2bf8_A
Probab=100.00 E-value=4.8e-39 Score=274.18 Aligned_cols=145 Identities=27% Similarity=0.433 Sum_probs=132.0
Q ss_pred chHHHHHHHHHHHHHHhc---CCCCceEEccCCCcccEEEEEEcCCCCccCCcEEEEEEEcCCCCCCCCCceeeecCccc
Q 039638 40 KSELAERIHKEWEILEKN---LPSSIFVRASAERIDLMRAVIIGLEGTPYCHGLFFFDIFFPTTYPVTPPLIFYHSYGFD 116 (283)
Q Consensus 40 ~~~~~kRL~kEl~~L~~~---~p~gi~v~~~e~~l~~w~~~I~Gp~~TPYegG~F~f~i~fP~~YP~~PP~v~F~t~i~r 116 (283)
++.+.+||++|+++|+++ ++.||++.+.++|++.|+++|.||+||||+||+|+|+|.||++||++||+|+|.|++
T Consensus 6 s~~a~~RL~kEl~~l~~~~~~~~~~i~~~~~~~~l~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i-- 83 (159)
T 2bep_A 6 ANIAVQRIKREFKEVLKSEETSKNQIKVDLVDENFTELRGEIAGPPDTPYEGGRYQLEIKIPETYPFNPPKVRFITKI-- 83 (159)
T ss_dssp CHHHHHHHHHHHHHHHHCHHHHTTSEEEEECSSSSSEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEESSCC--
T ss_pred hHHHHHHHHHHHHHHHhcCCCCCCCEEEEeCCCchheEEEEEECCCCCCccCCEEEEEEeCCCcCCCCCCEEEeeCCC--
Confidence 356889999999999985 588999999999999999999999999999999999999999999999999999999
Q ss_pred CCCccc-CCCceeeecccccccCCccCCCCCCCccCCcccCcccHHHHHHHHHHhhhccCCC---CCCCCCCCcCCHHHH
Q 039638 117 LNPNLH-RDGQVSLDLLTINVSHSWWNCKRDSDEKQQWNPQESNIMQVLVSIQHKVLNANPY---YCHKGHPQKSNKEVF 192 (283)
Q Consensus 117 ~HPNv~-~~G~VCLslL~~~t~~~w~~~~~~g~~~e~WsP~~~ti~~VL~sIq~Ll~~pnP~---~~e~~~~~~~n~~~f 192 (283)
|||||| .+|+|||++|+ ++|+|+ ++|.+||++||+||.+|+|. +.++|..+..|.+.|
T Consensus 84 ~HPni~~~~G~iCl~iL~-----------------~~W~p~-~~i~~vl~~i~~ll~~p~~~~p~n~~aa~~~~~~~~~f 145 (159)
T 2bep_A 84 WHPNISSVTGAICLDILK-----------------DQWAAA-MTLRTVLLSLQALLAAAEPDDPQDAVVANQYKQNPEMF 145 (159)
T ss_dssp CBTTBCTTTCBBCCGGGT-----------------TTCCTT-CCHHHHHHHHHHHHHSCCTTSCSCHHHHHHHHHCHHHH
T ss_pred CccCCCCCCCEEeChhhh-----------------ccCCCC-CcHHHHHHHHHHHHhCCCCCCcccHHHHHHHHHCHHHH
Confidence 999999 69999999998 689998 79999999999999999875 445666777888889
Q ss_pred HHHHHHHHHHHc
Q 039638 193 RLNCQAMLVMLQ 204 (283)
Q Consensus 193 ~~~~~~m~~~~~ 204 (283)
.+.|+.++..++
T Consensus 146 ~~~a~~~~~~~a 157 (159)
T 2bep_A 146 KQTARLWAHVYA 157 (159)
T ss_dssp HHHHHHHHHHHS
T ss_pred HHHHHHHHHHhh
Confidence 999888887765
No 26
>2gjd_A Ubiquitin-conjugating enzyme E2-18 kDa; UBC9P, SMT3, crystallography, ligase; 1.75A {Saccharomyces cerevisiae} PDB: 2eke_A 3ong_B
Probab=100.00 E-value=3.9e-39 Score=274.35 Aligned_cols=146 Identities=21% Similarity=0.367 Sum_probs=129.2
Q ss_pred hHHHHHHHHHHHHHHhcCCCCceEEccC-----CCcccEEEEEEcCCCCccCCcEEEEEEEcCCCCCCCCCceeeecCcc
Q 039638 41 SELAERIHKEWEILEKNLPSSIFVRASA-----ERIDLMRAVIIGLEGTPYCHGLFFFDIFFPTTYPVTPPLIFYHSYGF 115 (283)
Q Consensus 41 ~~~~kRL~kEl~~L~~~~p~gi~v~~~e-----~~l~~w~~~I~Gp~~TPYegG~F~f~i~fP~~YP~~PP~v~F~t~i~ 115 (283)
+.+.+||++|+++|++++|+||++.+.+ +|+..|+++|.||+||||+||+|+|+|.||++||++||+|+|.|++
T Consensus 3 ~~a~~RL~kE~~~l~~~~~~g~~~~p~~~~~~~~nl~~w~~~I~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i- 81 (157)
T 2gjd_A 3 SLCLQRLQEERKKWRKDHPFGFYAKPVKKADGSMDLQKWEAGIPGKEGTNWAGGVYPITVEYPNEYPSKPPKVKFPAGF- 81 (157)
T ss_dssp CHHHHHHHHHHHHHHHCCCTTCEEEEEECTTSCEEEEEEEEEEECCTTSTTTTBEEEEEEECCTTTTTSCCEEECCTTC-
T ss_pred hHHHHHHHHHHHHHHhCCCCCEEEEeccccCCCCcccEEEEEEECCCCCCcCCeEEEEEEEcCCCCCCCCCeeeccCCC-
Confidence 3678999999999999999999998864 4899999999999999999999999999999999999999999999
Q ss_pred cCCCcccCCCceeeecccccccCCccCCCCCCCccCCcccCcccHHHHHHHHHHhhhccCCC---CCCCCCCCcCCHHHH
Q 039638 116 DLNPNLHRDGQVSLDLLTINVSHSWWNCKRDSDEKQQWNPQESNIMQVLVSIQHKVLNANPY---YCHKGHPQKSNKEVF 192 (283)
Q Consensus 116 r~HPNv~~~G~VCLslL~~~t~~~w~~~~~~g~~~e~WsP~~~ti~~VL~sIq~Ll~~pnP~---~~e~~~~~~~n~~~f 192 (283)
||||||.+|+|||++|+ . .++|+|+ ++|.+||++||+||.+|+|. +.++|..+..|.+.|
T Consensus 82 -~HPnv~~~G~iCl~iL~--~-------------~~~W~p~-~~i~~vl~~i~~ll~~p~~~~p~n~~aa~~~~~~~~~y 144 (157)
T 2gjd_A 82 -YHPNVYPSGTICLSILN--E-------------DQDWRPA-ITLKQIVLGVQDLLDSPNPNSPAQEPAWRSFSRNKAEY 144 (157)
T ss_dssp -CCTTBCTTSBBCCGGGC--T-------------TTTCCTT-CCHHHHHHHHHHHHTSCCTTCCCCHHHHHHHHHCHHHH
T ss_pred -ccCCCCCCCcEeeeccc--C-------------CCCCCCC-CcHHHHHHHHHHHHhCCCCCCccCHHHHHHHHHCHHHH
Confidence 99999999999999998 2 1589999 79999999999999998874 334445667788888
Q ss_pred HHHHHHHHHHHc
Q 039638 193 RLNCQAMLVMLQ 204 (283)
Q Consensus 193 ~~~~~~m~~~~~ 204 (283)
.+.|+.++..++
T Consensus 145 ~~~~~~~~~~~a 156 (157)
T 2gjd_A 145 DKKVLLQAKQYS 156 (157)
T ss_dssp HHHHHHHHHHTB
T ss_pred HHHHHHHHHHhc
Confidence 888887776654
No 27
>2f4z_A Tgtwinscan_2721 - E2 domain; ubiquitin conjugating tgtwinscan_2721, structural genomics, structural genomics consortium, SGC; 2.11A {Toxoplasma gondii} SCOP: d.20.1.1
Probab=100.00 E-value=3.4e-39 Score=283.57 Aligned_cols=145 Identities=25% Similarity=0.409 Sum_probs=129.9
Q ss_pred chHHHHHHHHHHHHHHhcCC-------------CCceEEccCCCcccEEEEEEcCCCCccCCcEEEEEEEcCCCCCCCCC
Q 039638 40 KSELAERIHKEWEILEKNLP-------------SSIFVRASAERIDLMRAVIIGLEGTPYCHGLFFFDIFFPTTYPVTPP 106 (283)
Q Consensus 40 ~~~~~kRL~kEl~~L~~~~p-------------~gi~v~~~e~~l~~w~~~I~Gp~~TPYegG~F~f~i~fP~~YP~~PP 106 (283)
.+.+.+||++|+++|+++++ .||++.+.++|++.|.++|.||+||||+||+|+|+|.||++||++||
T Consensus 30 ~~~a~~RL~kEl~~l~k~~~~~~~~p~~~~~~~~gi~v~~~~~nl~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP 109 (193)
T 2f4z_A 30 TPREQARLLKELADIQQLQRAHDSEPAATHSTSHGVSAQIVGGDIHRWRGFIAGPLGTPYEGGHFTLDIVIPPDYPYNPP 109 (193)
T ss_dssp --CHHHHHHHHHHHHHHC----------------CEEEEEETTEEEEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCC
T ss_pred CCHHHHHHHHHHHHHHhCCCccccccccccCCCCcEEEEEcCCCcceEEEEEeCCCCCCcCCCEEEEEEECCCcCCCCCC
Confidence 34588999999999999987 79999999999999999999999999999999999999999999999
Q ss_pred ceeeecCcccCCCccc-CCCceeeecccccccCCccCCCCCCCccCCcccCcccHHHHHHHHHHhhhccCCC---CCCCC
Q 039638 107 LIFYHSYGFDLNPNLH-RDGQVSLDLLTINVSHSWWNCKRDSDEKQQWNPQESNIMQVLVSIQHKVLNANPY---YCHKG 182 (283)
Q Consensus 107 ~v~F~t~i~r~HPNv~-~~G~VCLslL~~~t~~~w~~~~~~g~~~e~WsP~~~ti~~VL~sIq~Ll~~pnP~---~~e~~ 182 (283)
+|+|.|++ |||||| .+|+|||++|+ +.|+|+ ++|.+||++||+||.+|+|. +.++|
T Consensus 110 ~V~F~T~i--~HPNI~~~~G~ICL~iL~-----------------~~WsP~-~ti~~vL~sI~sll~~pnp~~P~n~~aa 169 (193)
T 2f4z_A 110 KMKFVTKI--WHPNISSQTGAICLDILK-----------------HEWSPA-LTIRTALLSIQAMLADPVPTDPQDAEVA 169 (193)
T ss_dssp EEEESSCC--CBTTBCTTTCBBCCGGGT-----------------TTCCTT-SCHHHHHHHHHHHHHSCCTTSCSCHHHH
T ss_pred eEEEecCC--ccCCCcCCCCEEECcccc-----------------ccCCCC-CCHHHHHHHHHHHHhCCCCCCcccHHHH
Confidence 99999999 999999 69999999998 689999 79999999999999999875 45566
Q ss_pred CCCcCCHHHHHHHHHHHHHHHc
Q 039638 183 HPQKSNKEVFRLNCQAMLVMLQ 204 (283)
Q Consensus 183 ~~~~~n~~~f~~~~~~m~~~~~ 204 (283)
..+..|++.|.+.|+.|+..++
T Consensus 170 ~l~~~d~~~f~~~ar~~t~~ya 191 (193)
T 2f4z_A 170 KMMIENHPLFVQTAKLWTETFA 191 (193)
T ss_dssp HHHHHCHHHHHHHHHHHHHHHC
T ss_pred HHHHHCHHHHHHHHHHHHHHHc
Confidence 6777888999999998887765
No 28
>1i7k_A Ubiquitin-conjugating enzyme E2 H10; ligase; 1.95A {Homo sapiens} SCOP: d.20.1.1
Probab=100.00 E-value=4.8e-39 Score=279.63 Aligned_cols=145 Identities=21% Similarity=0.326 Sum_probs=129.3
Q ss_pred CchHHHHHHHHHHHHHHhcCCCCceEEccCCCcccEEEEEEcCCCCccCCcEEEEEEEcCCCCCCCCCceeeecCcccCC
Q 039638 39 PKSELAERIHKEWEILEKNLPSSIFVRASAERIDLMRAVIIGLEGTPYCHGLFFFDIFFPTTYPVTPPLIFYHSYGFDLN 118 (283)
Q Consensus 39 ~~~~~~kRL~kEl~~L~~~~p~gi~v~~~e~~l~~w~~~I~Gp~~TPYegG~F~f~i~fP~~YP~~PP~v~F~t~i~r~H 118 (283)
.++.+.+||++|++.|++++++||++.++++|++.|+++|.||+||||+||+|+|+|.||++||++||+|+|.|++ ||
T Consensus 27 ~~~~~~~RL~kEl~~l~~~~~~gi~~~p~~~nl~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~V~F~T~i--~H 104 (179)
T 1i7k_A 27 ARGPVGKRLQQELMTLMMSGDKGISAFPESDNLFKWVGTIHGAAGTVYEDLRYKLSLEFPSGYPYNAPTVKFLTPC--YH 104 (179)
T ss_dssp ---CHHHHHHHHHHHHHHHCCTTEEEEEETTEEEEEEEEEEBCTTSTTBTCEEEEEEECCTTTTTSCCEEEESSCC--CS
T ss_pred cChHHHHHHHHHHHHHHhCCCCCEEEEEcCCcccccEEEEECCCCCCcCCCEEEEEEECCCcCCCCCceEEEecCC--cc
Confidence 3567889999999999999999999999999999999999999999999999999999999999999999999999 99
Q ss_pred CcccCCCceeeecccccccCCccCCCCCCCccCCcccCcccHHHHHHHHHHhhhccCCC---CCCCCCCCcCCHHHHHHH
Q 039638 119 PNLHRDGQVSLDLLTINVSHSWWNCKRDSDEKQQWNPQESNIMQVLVSIQHKVLNANPY---YCHKGHPQKSNKEVFRLN 195 (283)
Q Consensus 119 PNv~~~G~VCLslL~~~t~~~w~~~~~~g~~~e~WsP~~~ti~~VL~sIq~Ll~~pnP~---~~e~~~~~~~n~~~f~~~ 195 (283)
||||.+|+|||++|. +.|+|+ ++|.+||++|++||.+|+|. +.++|..+ .|.+.|.+.
T Consensus 105 PNV~~~G~ICL~iL~-----------------~~WsP~-~ti~~vL~sI~sll~~Pn~~~Pln~~aa~l~-~d~~~f~~~ 165 (179)
T 1i7k_A 105 PNVDTQGNISLDILK-----------------EKWSAL-YDVRTILLSIQSLLGEPNIDSPLNTHAAELW-KNPTAFKKY 165 (179)
T ss_dssp TTBCTTCBBCCGGGT-----------------TTCCTT-CCHHHHHHHHHHHHHSCCTTSCSCHHHHHHT-TSHHHHHHH
T ss_pred CccccCCeEEcccCc-----------------CcCCCC-CCHHHHHHHHHHHHhCCCCcchhhHHHHHHh-hCHHHHHHH
Confidence 999999999999998 689999 79999999999999999875 44566667 778888887
Q ss_pred HHHHHHHHc
Q 039638 196 CQAMLVMLQ 204 (283)
Q Consensus 196 ~~~m~~~~~ 204 (283)
|+.++....
T Consensus 166 v~~~v~~~~ 174 (179)
T 1i7k_A 166 LQETYSKQV 174 (179)
T ss_dssp HHHHHHTTC
T ss_pred HHHHHHHHh
Confidence 776555443
No 29
>1yrv_A Ubiquitin-conjugating ligase MGC351130; structural genomics consortium, SGC, ubiquitin- conjugating enzyme; 2.18A {Homo sapiens} SCOP: d.20.1.1
Probab=100.00 E-value=4.7e-39 Score=277.24 Aligned_cols=138 Identities=19% Similarity=0.328 Sum_probs=122.2
Q ss_pred chHHHHHHHHHHHHHHhcCCCCceEEccCCCcccEEEEEEcCCCCccCCcEEEEEEEcCCCCCCCCCceeeecCcccCCC
Q 039638 40 KSELAERIHKEWEILEKNLPSSIFVRASAERIDLMRAVIIGLEGTPYCHGLFFFDIFFPTTYPVTPPLIFYHSYGFDLNP 119 (283)
Q Consensus 40 ~~~~~kRL~kEl~~L~~~~p~gi~v~~~e~~l~~w~~~I~Gp~~TPYegG~F~f~i~fP~~YP~~PP~v~F~t~i~r~HP 119 (283)
++.+.+||++|+++|++++++||++.+.++|++.|.++|.||+||||+||+|+|+|.||++||++||+|+|.|++ |||
T Consensus 21 ~~~a~~RL~kEl~~l~~~~~~gi~~~p~~~nl~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~V~F~T~i--~HP 98 (169)
T 1yrv_A 21 HGRAYLLLHRDFCDLKENNYKGITAKPVSEDMMEWEVEIEGLQNSVWQGLVFQLTIHFTSEYNYAPPVVKFITIP--FHP 98 (169)
T ss_dssp GCHHHHHHHHHHHHHHHHCCTTEEEEECSTTSCEEEEEEECCTTSTTTTCEEEEEEECCTTBTTBCCEEEESSCC--CCT
T ss_pred ChHHHHHHHHHHHHHHhCCCCCEEEEEcCCccccceeEEECCCCCCccceEEEEEEECCccCCCCCCcceecCCC--ccC
Confidence 446889999999999999999999999999999999999999999999999999999999999999999999999 999
Q ss_pred cc-cCCCceeeecccccccCCccCCCCCCCccCCcccCcccHHHHHHHHHHhhhccCCC---CCCCCCCCcCCHHHHHHH
Q 039638 120 NL-HRDGQVSLDLLTINVSHSWWNCKRDSDEKQQWNPQESNIMQVLVSIQHKVLNANPY---YCHKGHPQKSNKEVFRLN 195 (283)
Q Consensus 120 Nv-~~~G~VCLslL~~~t~~~w~~~~~~g~~~e~WsP~~~ti~~VL~sIq~Ll~~pnP~---~~e~~~~~~~n~~~f~~~ 195 (283)
|| +.+|+|||++|+ + .++|+|+ ++|.+||++||+||.+|||. +.++|+.+..|++.|.+.
T Consensus 99 NI~~~~G~ICL~iL~--~-------------~~~WsP~-~ti~~vL~sI~sll~~Pn~~~Pln~eaa~l~~~d~~~y~~~ 162 (169)
T 1yrv_A 99 NVDPHTGQPCIDFLD--N-------------PEKWNTN-YTLSSILLALQVMLSNPVLENPVNLEAARILVKDESLYRTI 162 (169)
T ss_dssp TBCTTTCCBCCHHHH--C-------------GGGCCTT-CCHHHHHHHHHHHHTSCCTTSCSCHHHHHHHHSCHHHHHHH
T ss_pred cccCCCCeEeehhhc--C-------------CcCCCCc-CCHHHHHHHHHHHHhCCCCCCchhHHHHHHHHHCHHHHHHH
Confidence 99 799999999998 2 1689999 79999999999999999875 333444455566655544
No 30
>1tte_A Ubiquitin-conjugating enzyme E2-24 kDa; UBC1, ubiquitin-dependent degradation, ligase; NMR {Saccharomyces cerevisiae} SCOP: a.5.2.1 d.20.1.1
Probab=100.00 E-value=2.3e-39 Score=288.92 Aligned_cols=143 Identities=25% Similarity=0.468 Sum_probs=132.0
Q ss_pred HHHHHHHHHHHHHHhcCCCCceEEccCC-CcccEEEEEEcCCCCccCCcEEEEEEEcCCCCCCCCCceeeecCcccCCCc
Q 039638 42 ELAERIHKEWEILEKNLPSSIFVRASAE-RIDLMRAVIIGLEGTPYCHGLFFFDIFFPTTYPVTPPLIFYHSYGFDLNPN 120 (283)
Q Consensus 42 ~~~kRL~kEl~~L~~~~p~gi~v~~~e~-~l~~w~~~I~Gp~~TPYegG~F~f~i~fP~~YP~~PP~v~F~t~i~r~HPN 120 (283)
++.+||++|++.|++++|+||++.+.++ ++..|+++|.||+||||+||+|+|+|.||++||++||+|+|.|++ ||||
T Consensus 2 ~a~~RL~kEl~~l~~~~~~gi~~~p~~~~~l~~w~~~I~GP~~TpYegG~f~l~i~fP~~YP~~PP~V~F~T~i--~HPN 79 (215)
T 1tte_A 2 SRAKRIMKEIQAVKDDPAAHITLEFVSESDIHHLKGTFLGPPGTPYEGGKFVVDIEVPMEYPFKPPKMQFDTKV--YHPN 79 (215)
T ss_dssp TTHHHHHHHHHHHHTTTCTTCEECCCSSSSCCEEEEECCEEEEETTEEECCEEEEECCSCSSSCCCEEEETTTC--CCSS
T ss_pred hHHHHHHHHHHHHHhCCCCCEEEEECCCccccccEEEEeCCCCCCcCCCEEEEEEeCCccCCCCCCcccccCCC--ccCc
Confidence 4679999999999999999999998766 567999999999999999999999999999999999999999999 9999
Q ss_pred ccC-CCceeeecccccccCCccCCCCCCCccCCcccCcccHHHHHHHHHHhhhccCCC---CCCCCCCCcCCHHHHHHHH
Q 039638 121 LHR-DGQVSLDLLTINVSHSWWNCKRDSDEKQQWNPQESNIMQVLVSIQHKVLNANPY---YCHKGHPQKSNKEVFRLNC 196 (283)
Q Consensus 121 v~~-~G~VCLslL~~~t~~~w~~~~~~g~~~e~WsP~~~ti~~VL~sIq~Ll~~pnP~---~~e~~~~~~~n~~~f~~~~ 196 (283)
||. +|+|||++|+ +.|+|+ +||.+||++||+||.+|||. +.++|..+..|++.|.++|
T Consensus 80 I~~~~G~ICL~iL~-----------------~~WsP~-~ti~~VL~sI~sLL~~Pnp~~Pln~eaa~~~~~d~~~f~~~a 141 (215)
T 1tte_A 80 ISSVTGAICLDILR-----------------NAWSPV-ITLKSALISLQALLQSPEPNDPQDAEVAQHYLRDRESFNKTA 141 (215)
T ss_dssp SCSSSSCCCSSTTT-----------------CCSCTT-CCHHHHHHHHHHHHTSCCCSSCSCHHHHHHHHHCHHHHHHHH
T ss_pred CcCCCCEEECccCC-----------------CCCCCc-CcHHHHHHHHHHHHhCCCCCCccCHHHHHHHHHCHHHHHHHH
Confidence 998 9999999998 689999 79999999999999999975 3445566788999999999
Q ss_pred HHHHHHHc
Q 039638 197 QAMLVMLQ 204 (283)
Q Consensus 197 ~~m~~~~~ 204 (283)
+.|+..++
T Consensus 142 r~~t~~yA 149 (215)
T 1tte_A 142 ALWTRLYA 149 (215)
T ss_dssp HHHHHHSS
T ss_pred HHHHHHhc
Confidence 99998888
No 31
>2grr_A Ubiquitin-conjugating enzyme E2 I; ubiquitin, conjugation, small ubiquitin like modifer, SMT3, ligase; 1.30A {Homo sapiens} PDB: 2grq_A 2grn_A 2pe6_A 2gro_A 2grp_A 1u9a_A 1u9b_A 2vrr_A 2px9_B 1z5s_A 2xwu_A 3uin_A 3uio_A 3uip_A* 1kps_A 2o25_C 1a3s_A 3a4s_A 2uyz_A
Probab=100.00 E-value=1.4e-38 Score=271.93 Aligned_cols=147 Identities=22% Similarity=0.350 Sum_probs=129.7
Q ss_pred chHHHHHHHHHHHHHHhcCCCCceEEccC-----CCcccEEEEEEcCCCCccCCcEEEEEEEcCCCCCCCCCceeeecCc
Q 039638 40 KSELAERIHKEWEILEKNLPSSIFVRASA-----ERIDLMRAVIIGLEGTPYCHGLFFFDIFFPTTYPVTPPLIFYHSYG 114 (283)
Q Consensus 40 ~~~~~kRL~kEl~~L~~~~p~gi~v~~~e-----~~l~~w~~~I~Gp~~TPYegG~F~f~i~fP~~YP~~PP~v~F~t~i 114 (283)
++.+.+||++|+++|++++|+||++.+.+ +|+..|.++|.||+||||+||+|+|+|.||++||++||+|+|.|++
T Consensus 5 ~~~a~~RL~kE~~~l~~~~~~g~~~~p~~~~~~~~nl~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i 84 (161)
T 2grr_A 5 SGIALSRLAQERKAWRKDHPFGFVAVPTKNPDGTMNLMNWECAIPGKKGTPWEGGLFKLRMLFKDDYPSSPPKCKFEPPL 84 (161)
T ss_dssp CHHHHHHHHHHHHHHHHSCCTTCEEEEEECTTSCEEEEEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEESSCC
T ss_pred cHHHHHHHHHHHHHHHhCCCCCEEEEeccccCCCCCccEEEEEEECCCCCCccCCEEEEEEEcCcccCCCCCEEEEecCc
Confidence 45688999999999999999999998753 6899999999999999999999999999999999999999999999
Q ss_pred ccCCCcccCCCceeeecccccccCCccCCCCCCCccCCcccCcccHHHHHHHHHHhhhccCCC---CCCCCCCCcCCHHH
Q 039638 115 FDLNPNLHRDGQVSLDLLTINVSHSWWNCKRDSDEKQQWNPQESNIMQVLVSIQHKVLNANPY---YCHKGHPQKSNKEV 191 (283)
Q Consensus 115 ~r~HPNv~~~G~VCLslL~~~t~~~w~~~~~~g~~~e~WsP~~~ti~~VL~sIq~Ll~~pnP~---~~e~~~~~~~n~~~ 191 (283)
||||||.+|+|||++|+ . .++|+|+ ++|.+||++|++||.+|+|. +.+++..+..|.+.
T Consensus 85 --~HPnv~~~G~iCl~iL~--~-------------~~~W~p~-~~i~~vl~~i~~ll~~p~~~~p~n~~aa~~~~~~~~~ 146 (161)
T 2grr_A 85 --FHPNVYPSGTVCLSILE--E-------------DKDWRPA-ITIKQILLGIQELLNEPNIQSPAQAEAYTIYCQNRVE 146 (161)
T ss_dssp --CSTTBCTTSBBCCGGGC--T-------------TTTCCTT-CCHHHHHHHHHHHHHSCCTTSCSCHHHHHHHHHCHHH
T ss_pred --ccCCCCCCCeEeehhcC--C-------------CCCcCCC-CcHHHHHHHHHHHHhCCCCCCccCHHHHHHHHHCHHH
Confidence 99999999999999998 2 1589999 79999999999999998874 33444556677888
Q ss_pred HHHHHHHHHHHHc
Q 039638 192 FRLNCQAMLVMLQ 204 (283)
Q Consensus 192 f~~~~~~m~~~~~ 204 (283)
|.+.|+.++..++
T Consensus 147 y~~~~~~~~~~~a 159 (161)
T 2grr_A 147 YEKRVRAQAKKFA 159 (161)
T ss_dssp HHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHh
Confidence 8888887776654
No 32
>1wzv_A Ubiquitin-conjugating enzyme E2 L6; ligase; 2.10A {Homo sapiens} SCOP: d.20.1.1 PDB: 1wzw_A 2kjh_A
Probab=100.00 E-value=1.3e-38 Score=270.23 Aligned_cols=143 Identities=25% Similarity=0.433 Sum_probs=129.7
Q ss_pred HHHHHHHHHHHHHHhcCCCCceE-EccCCCcccEEEEEEcCCCCccCCcEEEEEEEcCCCCCCCCCceeeecCcccCCCc
Q 039638 42 ELAERIHKEWEILEKNLPSSIFV-RASAERIDLMRAVIIGLEGTPYCHGLFFFDIFFPTTYPVTPPLIFYHSYGFDLNPN 120 (283)
Q Consensus 42 ~~~kRL~kEl~~L~~~~p~gi~v-~~~e~~l~~w~~~I~Gp~~TPYegG~F~f~i~fP~~YP~~PP~v~F~t~i~r~HPN 120 (283)
.+.+||++|+++|++++++||++ .++++|++.|+++|. |+||||+||+|+|+|.||++||++||+|+|.|++ ||||
T Consensus 4 ~~~~RL~kEl~~l~~~~~~~i~~~~~~~~~l~~w~~~I~-P~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i--~HPn 80 (155)
T 1wzv_A 4 MASMRVVKELEDLQKKPPPYLRNLSSDDANVLVWHALLL-PDQPPYHLKAFNLRISFPPEYPFKPPMIKFTTKI--YHPN 80 (155)
T ss_dssp -CHHHHHHHHHHHHHSCCTTEEEEEECSSCTTEEEEEEC-CCSTTGGGEEEEEEEECCTTTTSSCCEEEESSCC--CBTT
T ss_pred hHHHHHHHHHHHHHhCCCCCEEEEecCCCchheEEEEEc-CCCCCCCCCEEEEEEECCCCCCCCCCcceeeCCC--ccCc
Confidence 46799999999999999999999 788999999999999 9999999999999999999999999999999999 9999
Q ss_pred ccCCCceeeecccccccCCccCCCCCCCccCCcccCcccHHHHHHHHHHhhhccCCC---CCCCCCCCcCCHHHHHHHHH
Q 039638 121 LHRDGQVSLDLLTINVSHSWWNCKRDSDEKQQWNPQESNIMQVLVSIQHKVLNANPY---YCHKGHPQKSNKEVFRLNCQ 197 (283)
Q Consensus 121 v~~~G~VCLslL~~~t~~~w~~~~~~g~~~e~WsP~~~ti~~VL~sIq~Ll~~pnP~---~~e~~~~~~~n~~~f~~~~~ 197 (283)
||.+|+|||++|+ . ++|+|+ ++|.+||++||+||.+|+|. +.++|..+..|.+.|.+.|+
T Consensus 81 V~~~G~iCl~iL~--~--------------~~W~p~-~~i~~vl~~i~~ll~~p~~~~p~n~~aa~~~~~~~~~y~~~~r 143 (155)
T 1wzv_A 81 VDENGQICLPIIS--S--------------ENWKPC-TKTCQVLEALNVLVNRPNIREPLRMDLADLLTQNPELFRKNAE 143 (155)
T ss_dssp BCTTCBCCCGGGC--T--------------TTCCTT-CCHHHHHHHHHHHHHSCCSSSCSSHHHHHHHHHCHHHHHHHHH
T ss_pred CCCCCeEeecCCC--c--------------cCCCCC-CcHHHHHHHHHHHHhCCCCCchHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999994 2 689999 79999999999999999874 34455667788888888888
Q ss_pred HHHHHHc
Q 039638 198 AMLVMLQ 204 (283)
Q Consensus 198 ~m~~~~~ 204 (283)
.++..++
T Consensus 144 ~~~~~~a 150 (155)
T 1wzv_A 144 EFTLRFG 150 (155)
T ss_dssp HHHHHHC
T ss_pred HHHHHhc
Confidence 8887766
No 33
>2h2y_A Ubiquitin-conjugating enzyme; structural genomics, unknown function, structural genomics consortium, SGC; 2.80A {Plasmodium falciparum 3D7}
Probab=100.00 E-value=1.2e-37 Score=259.51 Aligned_cols=133 Identities=23% Similarity=0.448 Sum_probs=118.2
Q ss_pred ccccccccCccccCCcchhcccccCCCCchHHHHHHHHHHHHHHhcCCCCceEEccCCCcccEEEEEEcCCCCccCCcEE
Q 039638 12 YKNFARIPTHLLNQNHHFIDHKTININPKSELAERIHKEWEILEKNLPSSIFVRASAERIDLMRAVIIGLEGTPYCHGLF 91 (283)
Q Consensus 12 ~~~~~~v~~~~~~~~h~~~~~~~~~~~~~~~~~kRL~kEl~~L~~~~p~gi~v~~~e~~l~~w~~~I~Gp~~TPYegG~F 91 (283)
||+++.+..+ ....| ..+.+.+||++|+++|++++|.||++.++++|++.|+++|.||+||||+||+|
T Consensus 2 ~~~~~~~~~~---~~~~~---------~~~~~~~RL~kEl~~l~~~~~~~~~~~~~~~nl~~W~~~I~GP~~tpYegg~f 69 (136)
T 2h2y_A 2 LKPSRTVEKH---IKTKY---------NLGNANYRIQKELNNFLKNPPINCTIDVHPSNIRIWIVQYVGLENTIYANEVY 69 (136)
T ss_dssp -CCCCCSSCS---SSSCC---------CTTSHHHHHHHHHHHHHHSCCTTEEEEECTTCTTEEEEEEECCTTSTTTTCEE
T ss_pred Ccccchhhhh---hhhhc---------cchHHHHHHHHHHHHHHhCCCCCeEEEeccccccccEEEEECCCCCceeCCEE
Confidence 5677777666 33222 23357799999999999999999999999999999999999999999999999
Q ss_pred EEEEEcCCCCCCCCCceeeecCcccCCCcccCCCceeeecccccccCCccCCCCCCCccCCcccCcccHHHHHHHHHHhh
Q 039638 92 FFDIFFPTTYPVTPPLIFYHSYGFDLNPNLHRDGQVSLDLLTINVSHSWWNCKRDSDEKQQWNPQESNIMQVLVSIQHKV 171 (283)
Q Consensus 92 ~f~i~fP~~YP~~PP~v~F~t~i~r~HPNv~~~G~VCLslL~~~t~~~w~~~~~~g~~~e~WsP~~~ti~~VL~sIq~Ll 171 (283)
+|+|.||++||++||+|+|.|++ +||||||.+|+|||++|+ +.|+|+ ++|.+||++||+||
T Consensus 70 ~~~i~fp~~YP~~PP~v~f~t~i-~~HPnv~~~G~ICl~iL~-----------------~~WsP~-~ti~~vL~si~sll 130 (136)
T 2h2y_A 70 KIKIIFPDNYPLKPPIVYFLQKP-PKHTHVYSNGDICLSVLG-----------------DDYNPS-LSISGLILSIISML 130 (136)
T ss_dssp EEEEECCTTTTTSCCEEEECSSC-CCCTTBCTTCCBCCGGGT-----------------TTCCTT-CCHHHHHHHHHHHH
T ss_pred EEEEEeCCCCCCCCCEEEEeCCC-CCCCcCCCCCEEECcccc-----------------CCCCCC-CcHHHHHHHHHHHH
Confidence 99999999999999999999985 289999999999999998 689999 79999999999999
Q ss_pred hccC
Q 039638 172 LNAN 175 (283)
Q Consensus 172 ~~pn 175 (283)
.+|+
T Consensus 131 ~~p~ 134 (136)
T 2h2y_A 131 SSAK 134 (136)
T ss_dssp SSSC
T ss_pred hCcC
Confidence 9876
No 34
>2fo3_A Ubiquitin-conjugating enzyme; SGC, UBC, structural genomics, structural genomics consortium, unknown function; 1.86A {Plasmodium vivax} SCOP: d.20.1.1
Probab=100.00 E-value=8.7e-38 Score=256.74 Aligned_cols=116 Identities=25% Similarity=0.480 Sum_probs=105.5
Q ss_pred HHHHHHHHHHHHHHhcCCCCceEEccCCCcccEEEEEEcCCCCccCCcEEEEEEEcCCCCCCCCCceeeecCcccCCCcc
Q 039638 42 ELAERIHKEWEILEKNLPSSIFVRASAERIDLMRAVIIGLEGTPYCHGLFFFDIFFPTTYPVTPPLIFYHSYGFDLNPNL 121 (283)
Q Consensus 42 ~~~kRL~kEl~~L~~~~p~gi~v~~~e~~l~~w~~~I~Gp~~TPYegG~F~f~i~fP~~YP~~PP~v~F~t~i~r~HPNv 121 (283)
.+.+||++|+++|++++++||++.++++|++.|+++|.||+||||+||+|+++|.||++||++||+|+|.|++ +|||||
T Consensus 6 ~a~~RL~kEl~~l~~~~~~~~~~~~~~~~l~~w~~~i~GP~~tpYegg~f~~~i~fp~~YP~~PP~v~f~t~i-~~HPnv 84 (125)
T 2fo3_A 6 NANYRIQKELHNFLNNPPINCTLDVHPNNIRIWIVKYVGLENTIYANEVYKLKIIFPDDYPLKPPIVYFLQKP-PKHTHV 84 (125)
T ss_dssp ---CHHHHHHHHHHHSCCTTEEEEECTTCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEECSSC-CCBTTB
T ss_pred HHHHHHHHHHHHHHhCCCCCEEEEeCcchhhhhheEEeCCCCCCcCCCEEEEEEEcCCCCCCCCCEEEEeCCC-CCCCcC
Confidence 4678999999999999999999999999999999999999999999999999999999999999999999985 289999
Q ss_pred cCCCceeeecccccccCCccCCCCCCCccCCcccCcccHHHHHHHHHHhhhccCC
Q 039638 122 HRDGQVSLDLLTINVSHSWWNCKRDSDEKQQWNPQESNIMQVLVSIQHKVLNANP 176 (283)
Q Consensus 122 ~~~G~VCLslL~~~t~~~w~~~~~~g~~~e~WsP~~~ti~~VL~sIq~Ll~~pnP 176 (283)
|.+|+|||++|+ ++|+|+ ++|.+||++||+||.+|++
T Consensus 85 ~~~G~iCl~iL~-----------------~~W~P~-~~i~~vl~si~~ll~~p~~ 121 (125)
T 2fo3_A 85 YSNGDICLSLLG-----------------DDYNPS-LSISGLVLSIISMLSSAKE 121 (125)
T ss_dssp CTTSBBCCGGGT-----------------TTCCTT-CCHHHHHHHHHHHHC----
T ss_pred CCCCEEEchhcC-----------------CCCCCC-CcHHHHHHHHHHHHhCccc
Confidence 999999999997 689999 7999999999999998876
No 35
>1y8x_A Ubiquitin-conjugating enzyme E2 M; ubiquitin-conjugating enzyme E2 M, ligase; 2.40A {Homo sapiens} SCOP: d.20.1.1
Probab=100.00 E-value=9.8e-38 Score=266.64 Aligned_cols=138 Identities=25% Similarity=0.427 Sum_probs=121.7
Q ss_pred chHHHHHHHHHHHHHHhcCCCCceEE-ccCCCcccEEEEEEcCCCCccCCcEEEEEEEcCCCCCCCCCceeeecCcccCC
Q 039638 40 KSELAERIHKEWEILEKNLPSSIFVR-ASAERIDLMRAVIIGLEGTPYCHGLFFFDIFFPTTYPVTPPLIFYHSYGFDLN 118 (283)
Q Consensus 40 ~~~~~kRL~kEl~~L~~~~p~gi~v~-~~e~~l~~w~~~I~Gp~~TPYegG~F~f~i~fP~~YP~~PP~v~F~t~i~r~H 118 (283)
.+.+.+||++|+++| ++|+||++. ++++|+..|.++| ||++|||+||+|+|+|.||++||++||+|+|.|++ ||
T Consensus 4 ~~~~~~RL~kEl~~l--~~~~~~~~~~~~~~~l~~w~~~i-gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i--~H 78 (160)
T 1y8x_A 4 ASAAQLRIQKDINEL--NLPKTCDISFSDPDDLLNFKLVI-CPDEGFYKSGKFVFSFKVGQGYPHDPPKVKCETMV--YH 78 (160)
T ss_dssp CCHHHHHHHHHHHTC--CCCTTEEEECSSTTCTTEEEEEE-CCSSSTTTTBCEEEEEECCTTTTTSCCEEEECSCC--CB
T ss_pred ccHHHHHHHHHHHhc--CCCCCeEEEeccCCccceEEEEE-CCCCCCCCCCEEEEEEeCCCcCCCCCCEEEEecCC--cc
Confidence 356889999999999 678999998 7899999999988 99999999999999999999999999999999999 99
Q ss_pred CcccCCCceeeecccccccCCccCCCCCCCccCCcccCcccHHHHHHHHHHhhhccCCC---CCCCCCCCcCCHHHHHHH
Q 039638 119 PNLHRDGQVSLDLLTINVSHSWWNCKRDSDEKQQWNPQESNIMQVLVSIQHKVLNANPY---YCHKGHPQKSNKEVFRLN 195 (283)
Q Consensus 119 PNv~~~G~VCLslL~~~t~~~w~~~~~~g~~~e~WsP~~~ti~~VL~sIq~Ll~~pnP~---~~e~~~~~~~n~~~f~~~ 195 (283)
||||.+|+|||++|+ +.|+|+ ++|.+||++||+||.+|+|. +.++|..+..|.+.|.+.
T Consensus 79 Pnv~~~G~iCl~iL~-----------------~~W~p~-~~i~~vL~~i~~ll~~Pn~~~p~n~~aa~~~~~~~~~f~~~ 140 (160)
T 1y8x_A 79 PNIDLEGNVCLNILR-----------------EDWKPV-LTINSIIYGLQYLFLEPNPEDPLNKEAAEVLQNNRRLFEQN 140 (160)
T ss_dssp TTBCTTCBBCCGGGT-----------------TTCCTT-CCHHHHHHHHHHHHHSCCCSSCSCHHHHHHHHSCHHHHHHH
T ss_pred CcCCCCCeEEcccch-----------------hhccCC-CCHHHHHHHHHHHHhCCCCCCccCHHHHHHHHHCHHHHHHH
Confidence 999999999999998 689999 79999999999999999874 334445556677777776
Q ss_pred HHHHH
Q 039638 196 CQAML 200 (283)
Q Consensus 196 ~~~m~ 200 (283)
|+.++
T Consensus 141 v~~~v 145 (160)
T 1y8x_A 141 VQRSM 145 (160)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 66544
No 36
>2a7l_A Hypothetical ubiquitin-conjugating enzyme LOC55284; structural genomics consortium, (SGC), ligase; 1.82A {Homo sapiens} SCOP: d.20.1.1
Probab=100.00 E-value=1.3e-37 Score=259.57 Aligned_cols=111 Identities=23% Similarity=0.443 Sum_probs=105.5
Q ss_pred HHHHHHHHHHHHhcCCCCceEE--ccCCCcccEEEEEEcCCCCccCCcEEEEEEEcCCCCCCCCCceeeecCcccCCCcc
Q 039638 44 AERIHKEWEILEKNLPSSIFVR--ASAERIDLMRAVIIGLEGTPYCHGLFFFDIFFPTTYPVTPPLIFYHSYGFDLNPNL 121 (283)
Q Consensus 44 ~kRL~kEl~~L~~~~p~gi~v~--~~e~~l~~w~~~I~Gp~~TPYegG~F~f~i~fP~~YP~~PP~v~F~t~i~r~HPNv 121 (283)
++||++|+++|++++|+||++. ++++|++.|+++|.||+||||+||+|+|+|.||++||++||+|+|.|++++|||||
T Consensus 24 ~~RL~kEl~~l~~~~~~gi~v~~~~~~~nl~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~v~F~T~i~~~HPNV 103 (136)
T 2a7l_A 24 QKRLQKELLALQNDPPPGMTLNEKSVQNSITQWIVDMEGAPGTLYEGEKFQLLFKFSSRYPFDSPQVMFTGENIPVHPHV 103 (136)
T ss_dssp CHHHHHHHHHHHHSCCTTCCCCTTCCCCSCEEEEEEEECCTTSTTTTCEEEEEEEECTTTTTSCCEEEEESSCCCCBTTB
T ss_pred HHHHHHHHHHHHhCCCCCEEEEEeeCccccceeEEEEECCCCCccccEEEEEEEECCCCCCCCCCEEEEeCCCcCCCccC
Confidence 4999999999999999999976 78899999999999999999999999999999999999999999999996669999
Q ss_pred cCCCceeeecccccccCCccCCCCCCCccCCcccCcccHHHHHHHHHHhhh
Q 039638 122 HRDGQVSLDLLTINVSHSWWNCKRDSDEKQQWNPQESNIMQVLVSIQHKVL 172 (283)
Q Consensus 122 ~~~G~VCLslL~~~t~~~w~~~~~~g~~~e~WsP~~~ti~~VL~sIq~Ll~ 172 (283)
|.+|+|||++|+ ++|+|+ ++|.+||++||+||.
T Consensus 104 ~~~G~ICL~iL~-----------------~~WsP~-~ti~~vL~sI~slL~ 136 (136)
T 2a7l_A 104 YSNGHICLSILT-----------------EDWSPA-LSVQSVCLSIISMLS 136 (136)
T ss_dssp CTTCBBCCGGGT-----------------TTCCTT-SCHHHHHHHHHHHTC
T ss_pred CCCCeEEchhcC-----------------CCCCCC-CcHHHHHHHHHHHhC
Confidence 999999999998 689999 799999999999973
No 37
>2y9m_A Ubiquitin-conjugating enzyme E2-21 kDa; ligase-transport protein complex, ubiquitin conjugating ENZY complex, peroxisomal protein; 2.60A {Saccharomyces cerevisiae} PDB: 2y9p_A 2y9o_A
Probab=100.00 E-value=2.3e-37 Score=267.15 Aligned_cols=146 Identities=20% Similarity=0.330 Sum_probs=128.3
Q ss_pred chHHHHHHHHHHHHHHh-c-C------CC---CceEEc-cCCCcccEEEEEEcCCCCccCCcEEEEEEEcCCCCCCCCCc
Q 039638 40 KSELAERIHKEWEILEK-N-L------PS---SIFVRA-SAERIDLMRAVIIGLEGTPYCHGLFFFDIFFPTTYPVTPPL 107 (283)
Q Consensus 40 ~~~~~kRL~kEl~~L~~-~-~------p~---gi~v~~-~e~~l~~w~~~I~Gp~~TPYegG~F~f~i~fP~~YP~~PP~ 107 (283)
++.+.+||++|+++|++ + + |. ++.+.+ +++|++.|+++|.||+||||+||+|+|+|.||++||++||+
T Consensus 4 s~~~~~RL~kEl~~l~~~~~~~~~~~~p~~g~~~~~~p~~~~nl~~w~~~I~Gp~~tpyegg~f~~~i~fp~~YP~~PP~ 83 (172)
T 2y9m_A 4 ADTCMSRIVKEYKVILKTLASDDPIANPYRGIIESLNPIDETDLSKWEAIISGPSDTPYENHQFRILIEVPSSYPMNPPK 83 (172)
T ss_dssp CHHHHHHHHHHHHHHHHHHTCCCTTTCTTTTTEEEEEESSTTCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCE
T ss_pred cHHHHHHHHHHHHHHHhccCCcccccCCCCcceEEEecCCCCchhEEEEEEECCCCCcccCCEEEEEEECCCcCCCCCCE
Confidence 45788999999999998 5 3 43 467777 88999999999999999999999999999999999999999
Q ss_pred eeeec-CcccCCCccc-CCCceeeecccccccCCccCCCCCCCccCCcccCcccHHHHHHHHHHhhhccCCC---CCCCC
Q 039638 108 IFYHS-YGFDLNPNLH-RDGQVSLDLLTINVSHSWWNCKRDSDEKQQWNPQESNIMQVLVSIQHKVLNANPY---YCHKG 182 (283)
Q Consensus 108 v~F~t-~i~r~HPNv~-~~G~VCLslL~~~t~~~w~~~~~~g~~~e~WsP~~~ti~~VL~sIq~Ll~~pnP~---~~e~~ 182 (283)
|+|.| ++ |||||+ .+|+|||++|+ . +.|+|+ ++|.+||++||+||.+|+|. +.++|
T Consensus 84 v~f~t~~i--~HPni~~~~G~iCl~iL~--~--------------~~W~p~-~~i~~vL~si~~ll~~p~~~~p~n~~aa 144 (172)
T 2y9m_A 84 ISFMQNNI--LHCNVKSATGEICLNILK--P--------------EEWTPV-WDLLHCVHAVWRLLREPVCDSPLDVDIG 144 (172)
T ss_dssp EEECTTSC--CCTTEETTTTEECCGGGS--T--------------TTCCTT-CCHHHHHHHHHHHHHSCCTTSCSSHHHH
T ss_pred EEEeeCCe--ecCCCcCCCCEEeccccC--C--------------CCCCCc-CcHHHHHHHHHHHHhCCCCCCccCHHHH
Confidence 99999 98 999995 89999999997 3 689999 79999999999999999875 44566
Q ss_pred CCCcC-CHHHHHHHHHHHHHHHc
Q 039638 183 HPQKS-NKEVFRLNCQAMLVMLQ 204 (283)
Q Consensus 183 ~~~~~-n~~~f~~~~~~m~~~~~ 204 (283)
..+.. |.+.|.+.|+.++...+
T Consensus 145 ~~~~~~d~~~f~~~~~~~~~~~~ 167 (172)
T 2y9m_A 145 NIIRCGDMSAYQGIVKYFLAERE 167 (172)
T ss_dssp HHHTTTCHHHHHHHHHHHHHHHH
T ss_pred HHHHhCCHHHHHHHHHHHHHHHH
Confidence 67777 88888888888776654
No 38
>2nvu_C NEDD8-conjugating enzyme UBC12; multifunction macromolecular complex, ubiquitin, ATP, conformational change, thioester, switch, adenylation, protein turnover, ligase; HET: ATP; 2.80A {Homo sapiens} SCOP: d.20.1.1
Probab=100.00 E-value=2.4e-37 Score=269.07 Aligned_cols=141 Identities=25% Similarity=0.417 Sum_probs=122.7
Q ss_pred CCCchHHHHHHHHHHHHHHhcCCCCceEE-ccCCCcccEEEEEEcCCCCccCCcEEEEEEEcCCCCCCCCCceeeecCcc
Q 039638 37 INPKSELAERIHKEWEILEKNLPSSIFVR-ASAERIDLMRAVIIGLEGTPYCHGLFFFDIFFPTTYPVTPPLIFYHSYGF 115 (283)
Q Consensus 37 ~~~~~~~~kRL~kEl~~L~~~~p~gi~v~-~~e~~l~~w~~~I~Gp~~TPYegG~F~f~i~fP~~YP~~PP~v~F~t~i~ 115 (283)
.+..+.+.+||++|+++| ++|+||++. ++++|++.|.++| ||++|||+||+|+|+|.||++||++||+|+|.|++
T Consensus 21 ~~~~~~~~~RL~kEl~~l--~~~~~i~~~~p~~~nl~~W~~~i-gP~~tpYegg~f~~~i~fp~~YP~~PP~v~F~t~i- 96 (180)
T 2nvu_C 21 SKKASAAQLRIQKDINEL--NLPKTCDISFSDPDDLLNFKLVI-CPDEGFYKSGKFVFSFKVGQGYPHDPPKVKCETMV- 96 (180)
T ss_dssp CCSCCHHHHHHHHHHHTC--CCCTTEEEECSSTTCTTEEEEEE-CCCSGGGTTBCEEEEEECCTTTTTSCCEEEECSCC-
T ss_pred cCCccHHHHHHHHHHHhc--CCCCCeEEEecccccccceEEEE-CCCCCCCCCCEEEEEEeCCCcCCCCCCcCceeccC-
Confidence 445677899999999999 678999998 7899999999988 99999999999999999999999999999999999
Q ss_pred cCCCcccCCCceeeecccccccCCccCCCCCCCccCCcccCcccHHHHHHHHHHhhhccCCC---CCCCCCCCcCCHHHH
Q 039638 116 DLNPNLHRDGQVSLDLLTINVSHSWWNCKRDSDEKQQWNPQESNIMQVLVSIQHKVLNANPY---YCHKGHPQKSNKEVF 192 (283)
Q Consensus 116 r~HPNv~~~G~VCLslL~~~t~~~w~~~~~~g~~~e~WsP~~~ti~~VL~sIq~Ll~~pnP~---~~e~~~~~~~n~~~f 192 (283)
||||||.+|+|||++|+ +.|+|+ ++|.+||++|++||.+|+|. +.++|..+..|++.|
T Consensus 97 -~HPNV~~~G~iCl~iL~-----------------~~W~p~-~~i~~vL~si~~ll~~Pn~~~p~n~~aa~~~~~d~~~f 157 (180)
T 2nvu_C 97 -YHPNIDLEGNVALNILR-----------------EDWKPV-LTINSIIYGLQYLFLEPNPEDPLNKEAAEVLQNNRRLF 157 (180)
T ss_dssp -CBTTBCTTSBBCCGGGT-----------------TSCCTT-CCHHHHHHHHHHHHHSCCTTSCSSHHHHHHHHHCHHHH
T ss_pred -ccCCCCCCCcEEccccc-----------------ccCCCC-CCHHHHHHHHHHHHhCCCCCCccCHHHHHHHHHCHHHH
Confidence 99999999999999998 689999 79999999999999999875 233444455566666
Q ss_pred HHHHHHHH
Q 039638 193 RLNCQAML 200 (283)
Q Consensus 193 ~~~~~~m~ 200 (283)
.+.|+.++
T Consensus 158 ~~~v~~~v 165 (180)
T 2nvu_C 158 EQNVQRSM 165 (180)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 66665543
No 39
>4ddg_A Ubiquitin-conjugating enzyme E2 D2, ubiquitin THI OTUB1; inhibition, hydrolase-ligase complex; 3.30A {Homo sapiens} PDB: 4ddi_A
Probab=100.00 E-value=1.3e-36 Score=292.92 Aligned_cols=156 Identities=27% Similarity=0.488 Sum_probs=142.6
Q ss_pred hHHHHHHHHHHHHHHhcCCCCceEEccCCCcccEEEEEEcCCCCccCCcEEEEEEEcCCCCCCCCCceeeecCcccCCCc
Q 039638 41 SELAERIHKEWEILEKNLPSSIFVRASAERIDLMRAVIIGLEGTPYCHGLFFFDIFFPTTYPVTPPLIFYHSYGFDLNPN 120 (283)
Q Consensus 41 ~~~~kRL~kEl~~L~~~~p~gi~v~~~e~~l~~w~~~I~Gp~~TPYegG~F~f~i~fP~~YP~~PP~v~F~t~i~r~HPN 120 (283)
+.+.+||++|+++|++++|+||++.+.++|+..|.++|.||+||||+||+|+++|.||++||++||+|+|.|++ ||||
T Consensus 2 s~a~~RL~kEl~~l~~~~~~~~~~~p~~~nl~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~t~i--~HPn 79 (399)
T 4ddg_A 2 AMALKRIHKELNDLARDPPAQCSAGPVGDDMFHWQATIMGPNDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRI--YHPN 79 (399)
T ss_dssp HHHHHHHHHHHHHHHHSCCSSEEEEEETTEEEEEEEEEECCTTSSSTTCEEEEEEECCSSTTTSCCEEEESSCC--CCTT
T ss_pred cHHHHHHHHHHHHHHhCCCCCEEEEEcCCcceEEEEEEECCCCCCCCCCEEEEEEECCcccCCCCcEEEeeccc--cccc
Confidence 46889999999999999999999999999999999999999999999999999999999999999999999999 9999
Q ss_pred ccCCCceeeecccccccCCccCCCCCCCccCCcccCcccHHHHHHHHHHhhhccCCC---CCCCCCCCcCCHHHHHHHHH
Q 039638 121 LHRDGQVSLDLLTINVSHSWWNCKRDSDEKQQWNPQESNIMQVLVSIQHKVLNANPY---YCHKGHPQKSNKEVFRLNCQ 197 (283)
Q Consensus 121 v~~~G~VCLslL~~~t~~~w~~~~~~g~~~e~WsP~~~ti~~VL~sIq~Ll~~pnP~---~~e~~~~~~~n~~~f~~~~~ 197 (283)
|+.+|+|||++|+ ++|+|+ +||.+||++|++||.+|||. +.++|..+..|++.|.+.|+
T Consensus 80 v~~~G~iCl~il~-----------------~~W~p~-~~i~~vL~~i~~ll~~pnp~~p~n~~aa~~~~~d~~~y~~~~~ 141 (399)
T 4ddg_A 80 INSNGSISLDILR-----------------SQWSPA-LTISKVLLSICSLLCDPNPDDPLVPEIARIYKTDREKYNRIAR 141 (399)
T ss_dssp BCTTCBBCCGGGT-----------------TSCCTT-CCHHHHHHHHHHHHHSCCTTSCSSHHHHHHHHHCHHHHHHHHH
T ss_pred cCCCCeEeCcccc-----------------cCCCcc-ccHHHHHHHHHHHHcCCCCCchhhHHHHHHHHHCHHHHHHHHH
Confidence 9999999999998 689999 79999999999999999976 44566677899999999999
Q ss_pred HHHHHHcccccCCCCcchHHHHHHh
Q 039638 198 AMLVMLQPHMQFKQPHMQFKHLVQG 222 (283)
Q Consensus 198 ~m~~~~~~~l~~pp~~~~fe~~v~~ 222 (283)
.|+..++ ..+ ..+.+.|.+
T Consensus 142 ~~~~~~a----~~~--v~~De~i~~ 160 (399)
T 4ddg_A 142 EWTQKYA----MGG--SAYDEAIMA 160 (399)
T ss_dssp HHHHHHT----SCT--THHHHHHHH
T ss_pred HHHHHhh----ccc--cchhHHHHH
Confidence 9999988 555 555555544
No 40
>2onu_A Ubiquitin-conjugating enzyme, putative; UBC, plasmodium FAL structural genomics consortium, SGC, ligase; HET: PG4; 2.38A {Plasmodium falciparum}
Probab=100.00 E-value=8.4e-38 Score=265.00 Aligned_cols=139 Identities=19% Similarity=0.354 Sum_probs=125.4
Q ss_pred HHHHHHHHHHHHHhcCCCCceEEccCCCcccEEEEEEcCCCCccCCcEEEEEEEcCCCCCCCCCceeeecCcccCCCccc
Q 039638 43 LAERIHKEWEILEKNLPSSIFVRASAERIDLMRAVIIGLEGTPYCHGLFFFDIFFPTTYPVTPPLIFYHSYGFDLNPNLH 122 (283)
Q Consensus 43 ~~kRL~kEl~~L~~~~p~gi~v~~~e~~l~~w~~~I~Gp~~TPYegG~F~f~i~fP~~YP~~PP~v~F~t~i~r~HPNv~ 122 (283)
+.+||++|++.|+++ |+++.+.++|+..|+++|.||+||||+||+|+|+|.||++||++||+|+|.|++ ||||||
T Consensus 3 a~~Rl~kEl~~l~~~---~~~v~~~~~~l~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~t~i--~HPni~ 77 (152)
T 2onu_A 3 SLTRKQCDFTKLIMA---GYDLELNNGSTQDFDVMFHGPNGTAYEGGIWKVHVTLPDDYPFASPSIGFMNKL--LHPNVD 77 (152)
T ss_dssp CCCHHHHTHHHHHHH---TCCEEEETTEEEEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSCC--CCTTBC
T ss_pred HHHHHHHHHHhcCcC---CCEEEEccCccceEEEEEECCCCCcccceEEEEEEcCcccCCCCCCeEEEecCC--ccCcCc
Confidence 458999999999874 889999999999999999999999999999999999999999999999999999 999999
Q ss_pred -CCCceeeecccccccCCccCCCCCCCccCCcccCcccHHHHHHH-HHHhhhccCCC---CCCCCCCCcCCHHHHHHHHH
Q 039638 123 -RDGQVSLDLLTINVSHSWWNCKRDSDEKQQWNPQESNIMQVLVS-IQHKVLNANPY---YCHKGHPQKSNKEVFRLNCQ 197 (283)
Q Consensus 123 -~~G~VCLslL~~~t~~~w~~~~~~g~~~e~WsP~~~ti~~VL~s-Iq~Ll~~pnP~---~~e~~~~~~~n~~~f~~~~~ 197 (283)
.+|+|||++|+ ++|+|+ ++|.+||++ ||+||.+|||. +.++|..+..|.+.|.+.|+
T Consensus 78 ~~~G~iCl~il~-----------------~~W~p~-~~i~~vl~~ii~~Ll~~Pn~~~P~n~~aa~~~~~d~~~y~~~v~ 139 (152)
T 2onu_A 78 EASGSVCLDVIN-----------------QTWTPL-YSLVNVFEVFLPQLLTYPNPSDPLNSDAASLLMKDKNIYEEKVK 139 (152)
T ss_dssp TTTCBBCHHHHH-----------------HHCCTT-CCHHHHHHTHHHHHHHSCCCSSCSSHHHHHHHHHCHHHHHHHHH
T ss_pred CcCCeEeccccc-----------------ccCCCC-CCHHHHHHHHHHHHHhCCCCCCcccHHHHHHHHHCHHHHHHHHH
Confidence 59999999998 689999 799999999 78999999875 44555667788888888888
Q ss_pred HHHHHHc
Q 039638 198 AMLVMLQ 204 (283)
Q Consensus 198 ~m~~~~~ 204 (283)
.++..++
T Consensus 140 ~~~~~~a 146 (152)
T 2onu_A 140 EYVKLYA 146 (152)
T ss_dssp HHHHHHS
T ss_pred HHHHHhc
Confidence 8887776
No 41
>1c4z_D UBCH7, ubiquitin conjugating enzyme E2; bilobal structure, elongated shape, E3 ubiquitin ligase, E2 ubiquitin conjugating enzyme; 2.60A {Homo sapiens} SCOP: d.20.1.1 PDB: 1fbv_C* 3sy2_C 3sqv_C
Probab=100.00 E-value=5.7e-38 Score=266.12 Aligned_cols=115 Identities=27% Similarity=0.482 Sum_probs=107.2
Q ss_pred HHHHHHHHHHHHHhcCCCCceEE-ccCCCcccEEEEEEcCCCCccCCcEEEEEEEcCCCCCCCCCceeeecCcccCCCcc
Q 039638 43 LAERIHKEWEILEKNLPSSIFVR-ASAERIDLMRAVIIGLEGTPYCHGLFFFDIFFPTTYPVTPPLIFYHSYGFDLNPNL 121 (283)
Q Consensus 43 ~~kRL~kEl~~L~~~~p~gi~v~-~~e~~l~~w~~~I~Gp~~TPYegG~F~f~i~fP~~YP~~PP~v~F~t~i~r~HPNv 121 (283)
+.+||++|+++|++++|+||.+. ++++|++.|.++|. |+||||+||+|+|+|.||++||++||+|+|.|++ |||||
T Consensus 3 a~~RL~kEl~~l~~~~~~~~~~~~~~~~~l~~w~~~i~-P~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i--~HPnv 79 (154)
T 1c4z_D 3 ASRRLMKELEEIRKCGMKNFRNIQVDEANLLTWQGLIV-PDNPPYDKGAFRIEINFPAEYPFKPPKITFKTKI--YHPNI 79 (154)
T ss_dssp -CTTHHHHHTTCSSSCCSSCEEECSSCSSSSEEEEEEC-CCSSSCCSCCEEEEEECCTTTTTSCCEEEESSCC--CCTTB
T ss_pred HHHHHHHHHHHHHhCCCCCEEEeeCCCCchheEEEEEe-CCCCCccCCeEEEEEEeCCCCCCCCCEEEEeCCC--ccccC
Confidence 56899999999999999999865 57889999999998 9999999999999999999999999999999999 99999
Q ss_pred cCCCceeeecccccccCCccCCCCCCCccCCcccCcccHHHHHHHHHHhhhccCCC
Q 039638 122 HRDGQVSLDLLTINVSHSWWNCKRDSDEKQQWNPQESNIMQVLVSIQHKVLNANPY 177 (283)
Q Consensus 122 ~~~G~VCLslL~~~t~~~w~~~~~~g~~~e~WsP~~~ti~~VL~sIq~Ll~~pnP~ 177 (283)
|.+|+|||++|+ . ++|+|+ ++|.+||++|++||.+|+|.
T Consensus 80 ~~~G~iCl~iL~--~--------------~~W~p~-~~i~~vl~~i~~ll~~p~~~ 118 (154)
T 1c4z_D 80 DEKGQVCLPVIS--A--------------ENWKPA-TKTDQVIQSLIALVNDPQPE 118 (154)
T ss_dssp CTTCBBCCTTTS--S--------------SSCCTT-CCHHHHHHHHHHHHHSCCCS
T ss_pred CCCCEEECCCCC--C--------------CCCCCC-CcHHHHHHHHHHHHcCCCCC
Confidence 999999999997 3 689999 79999999999999999874
No 42
>2z5d_A Ubiquitin-conjugating enzyme E2 H; UBE2H, SGC, ligase, structural genomics, structural genomics consortium; 2.10A {Homo sapiens}
Probab=100.00 E-value=2.7e-37 Score=268.64 Aligned_cols=140 Identities=20% Similarity=0.327 Sum_probs=126.3
Q ss_pred hHHHHHHHHHHHHHHhcCCCCceEEccCCCcccEEEEEEcCCCCccCCcEEEEEEEcCCCCCCCCCceeeecCcccCCCc
Q 039638 41 SELAERIHKEWEILEKNLPSSIFVRASAERIDLMRAVIIGLEGTPYCHGLFFFDIFFPTTYPVTPPLIFYHSYGFDLNPN 120 (283)
Q Consensus 41 ~~~~kRL~kEl~~L~~~~p~gi~v~~~e~~l~~w~~~I~Gp~~TPYegG~F~f~i~fP~~YP~~PP~v~F~t~i~r~HPN 120 (283)
+.+.+||++|+++|++ +||++.+. +|++.|.++|.||+||||+||+|+|+|.||++||++||+|+|.|++ ||||
T Consensus 24 ~~a~~RL~kEl~~l~~---~g~~v~~~-ddl~~W~~~I~GP~~tpYegG~f~l~i~fp~~YP~~PP~V~F~t~i--~HPN 97 (179)
T 2z5d_A 24 SPGKRRMDTDVIKLIE---SKHEVTIL-GGLNEFVVKFYGPQGTPYEGGVWKVRVDLPDKYPFKSPSIGFMNKI--FHPN 97 (179)
T ss_dssp CHHHHHHHHHHHHHHH---SSSCEEEE-EETTEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSCC--CBTT
T ss_pred hHHHHHHHHHHHhcCc---CCCEEEEC-CCCceeEEEEECCCCCCccCCEEEEEeeCCCCCCCCCceEEEecCC--ccCc
Confidence 4688999999999985 58988887 6799999999999999999999999999999999999999999999 9999
Q ss_pred ccC-CCceeeecccccccCCccCCCCCCCccCCcccCcccHHHHHHH-HHHhhhccCCC---CCCCCCCCcCCHHHHHHH
Q 039638 121 LHR-DGQVSLDLLTINVSHSWWNCKRDSDEKQQWNPQESNIMQVLVS-IQHKVLNANPY---YCHKGHPQKSNKEVFRLN 195 (283)
Q Consensus 121 v~~-~G~VCLslL~~~t~~~w~~~~~~g~~~e~WsP~~~ti~~VL~s-Iq~Ll~~pnP~---~~e~~~~~~~n~~~f~~~ 195 (283)
||. +|+|||++|+ +.|+|+ ++|.+||++ ||+||.+|||. +.++|..+..|++.|.+.
T Consensus 98 V~~~~G~ICL~iL~-----------------~~WsP~-~ti~~iL~s~I~~Ll~~Pn~~~p~n~eaa~~~~~d~~~y~~~ 159 (179)
T 2z5d_A 98 IDEASGTVCLDVIN-----------------QTWTAL-YDLTNIFESFLPQLLAYPNPIDPLNGDAAAMYLHRPEEYKQK 159 (179)
T ss_dssp BCTTTCBBCHHHHH-----------------HHCCTT-CCTTHHHHTHHHHHHHSCCCSSCSCHHHHHHHHHCHHHHHHH
T ss_pred CCCCCCeEeccccc-----------------cCCCCC-CCHHHHHHHHHHHHHhCCCCCCccCHHHHHHHHHCHHHHHHH
Confidence 997 9999999998 689999 799999999 99999999874 455666777888888888
Q ss_pred HHHHHHHHc
Q 039638 196 CQAMLVMLQ 204 (283)
Q Consensus 196 ~~~m~~~~~ 204 (283)
|+.++..++
T Consensus 160 vr~~~~~~a 168 (179)
T 2z5d_A 160 IKEYIQKYA 168 (179)
T ss_dssp HHHHHHHHS
T ss_pred HHHHHHHHc
Confidence 888887776
No 43
>2q0v_A Ubiquitin-conjugating enzyme E2, putative; malaria, structural G structural genomics consortium, SGC, ligase; 2.40A {Plasmodium falciparum} PDB: 3e95_C
Probab=100.00 E-value=5.4e-36 Score=255.13 Aligned_cols=133 Identities=20% Similarity=0.346 Sum_probs=116.4
Q ss_pred cCCCCchHHHHHHHHHHHHHHhc-CCCCceEEccC-C--CcccEEEEEEcCCCCccCCcEEEEEEEcCCCCCCCCCceee
Q 039638 35 ININPKSELAERIHKEWEILEKN-LPSSIFVRASA-E--RIDLMRAVIIGLEGTPYCHGLFFFDIFFPTTYPVTPPLIFY 110 (283)
Q Consensus 35 ~~~~~~~~~~kRL~kEl~~L~~~-~p~gi~v~~~e-~--~l~~w~~~I~Gp~~TPYegG~F~f~i~fP~~YP~~PP~v~F 110 (283)
........+.+||++|+++|+++ +++||++.+.. + |++.|.++|.||+||||+||+|+|+|.||++||++||+|+|
T Consensus 14 ~~~~~~~~~~~RL~kEl~~l~~~~~~~~i~~~~~~~~d~nl~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~v~F 93 (156)
T 2q0v_A 14 LYFQGIVPRSFRLLDELERGQKGNVSEGVSFGLESADDITLSNWSCTIFGQPGTVFENRIYSLTIFCDDNYPDSPPTVKF 93 (156)
T ss_dssp CCCSSCCCHHHHHHHHHHHHHCC-CCTTEEEEESSTTCTTCCEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEE
T ss_pred cCCcccchHHHHHHHHHHHHHhCCCCCCeEEEECCCccccceeeEEEEECCCCCCcCCcEEEEEEECCCcCCCCCCeEEE
Confidence 35566778889999999999998 78899998843 3 59999999999999999999999999999999999999999
Q ss_pred ecCcccCCCcccCCCce---eeecccccccCCccCCCCCCCccCCcccCcccHHHHHHHHHHhhhccCCC---CCCCCCC
Q 039638 111 HSYGFDLNPNLHRDGQV---SLDLLTINVSHSWWNCKRDSDEKQQWNPQESNIMQVLVSIQHKVLNANPY---YCHKGHP 184 (283)
Q Consensus 111 ~t~i~r~HPNv~~~G~V---CLslL~~~t~~~w~~~~~~g~~~e~WsP~~~ti~~VL~sIq~Ll~~pnP~---~~e~~~~ 184 (283)
.|++ ||||||.+|+| ||++|+ .|+|+ ++|.+||++||+||.+|+|. +.++|..
T Consensus 94 ~t~i--~HPNV~~~G~icisCL~iL~------------------~WsP~-~ti~~vL~sI~~ll~~Pn~~~p~n~~aa~~ 152 (156)
T 2q0v_A 94 DTKI--EMSCVDNCGRVIKNNLHILK------------------NWNRN-YTIETILISLRQEMLSSANKRLPQPNEGEV 152 (156)
T ss_dssp SBCC--CCTTBCTTSBBCGGGSHHHH------------------TCCTT-CCHHHHHHHHHHHTTSTTTTTCCCCCTTCB
T ss_pred Eccc--ccCCCccCCeEehhhccccc------------------CCCCc-CcHHHHHHHHHHHHhCCCCCCcCChHHHHH
Confidence 9999 99999999999 888886 49999 79999999999999999875 5667666
Q ss_pred CcCC
Q 039638 185 QKSN 188 (283)
Q Consensus 185 ~~~n 188 (283)
+..|
T Consensus 153 y~~n 156 (156)
T 2q0v_A 153 YSNN 156 (156)
T ss_dssp C---
T ss_pred hhhC
Confidence 6543
No 44
>3o2u_A NEDD8-conjugating enzyme UBC12; E2 conjugase, ligase; 2.00A {Saccharomyces cerevisiae} PDB: 3tdi_C
Probab=100.00 E-value=2.3e-36 Score=264.88 Aligned_cols=142 Identities=18% Similarity=0.368 Sum_probs=127.4
Q ss_pred CCCCchHHHHHHHHHHHHHHhcCCCCceEE----ccCCCcc---cEEEEEEcCCCCccCCcEEEEEEEcCCCCCCCCCce
Q 039638 36 NINPKSELAERIHKEWEILEKNLPSSIFVR----ASAERID---LMRAVIIGLEGTPYCHGLFFFDIFFPTTYPVTPPLI 108 (283)
Q Consensus 36 ~~~~~~~~~kRL~kEl~~L~~~~p~gi~v~----~~e~~l~---~w~~~I~Gp~~TPYegG~F~f~i~fP~~YP~~PP~v 108 (283)
..+..+.+.+||++|+++|+ +|+||++. ++++|++ .|.++|. |++|||+||+|+|+|.||++||++||+|
T Consensus 23 ~~~~~s~a~~RL~kEl~~l~--~~~~i~~~~~~~p~~~nl~~~~~w~~~I~-p~~tpyegg~f~~~i~fp~~YP~~PP~v 99 (190)
T 3o2u_A 23 IQPNLSAARIRLKRDLDSLD--LPPTVTLNVITSPDSADRSQSPKLEVIVR-PDEGYYNYGSINFNLDFNEVYPIEPPKV 99 (190)
T ss_dssp SSCCCCHHHHHHHHHHHTCC--CCTTEEEEEEECTTCCCTTSCCEEEEEEC-CSSSTTTTCCEEEEEECCTTTTTSCCEE
T ss_pred CCCCccHHHHHHHHHHHhcc--CCCCEEEEecCCCCCccCCcCCeEEEEEc-CCCCCCCCCEEEEEEECCCCCCCCCcee
Confidence 45567788999999999998 78899998 8899999 9999997 8889999999999999999999999999
Q ss_pred eeecCcccCCCcccCCCceeeecccccccCCccCCCCCCCccCCcccCcccHHHHHHHHHHhhhccCCC---CCCCCCCC
Q 039638 109 FYHSYGFDLNPNLHRDGQVSLDLLTINVSHSWWNCKRDSDEKQQWNPQESNIMQVLVSIQHKVLNANPY---YCHKGHPQ 185 (283)
Q Consensus 109 ~F~t~i~r~HPNv~~~G~VCLslL~~~t~~~w~~~~~~g~~~e~WsP~~~ti~~VL~sIq~Ll~~pnP~---~~e~~~~~ 185 (283)
+|.|++ ||||||.+|+|||++|+ +.|+|+ ++|.+||++|++||.+|||. +.++|..+
T Consensus 100 ~f~t~i--~HPnV~~~G~iCl~iL~-----------------~~W~p~-~~i~~vL~~i~~ll~~pn~~~pln~~aa~~~ 159 (190)
T 3o2u_A 100 VCLKKI--FHPNIDLKGNVCLNILR-----------------EDWSPA-LDLQSIITGLLFLFLEPNPNDPLNKDAAKLL 159 (190)
T ss_dssp EECSCC--CCTTBCTTSBBCCGGGT-----------------TTCCTT-CCHHHHHHHHHHHHHSCCTTSCSSHHHHHHH
T ss_pred EEecCc--ccCCCCCCCeEechhcc-----------------CCCCCC-CCHHHHHHHHHHHHhCCCCCcchhHHHHHHH
Confidence 999999 99999999999999998 689998 79999999999999999975 44555666
Q ss_pred cCCHHHHHHHHHHHH
Q 039638 186 KSNKEVFRLNCQAML 200 (283)
Q Consensus 186 ~~n~~~f~~~~~~m~ 200 (283)
..|++.|.+.|+.++
T Consensus 160 ~~d~~~f~~~ar~~~ 174 (190)
T 3o2u_A 160 CEGEKEFAEAVRLTM 174 (190)
T ss_dssp HTCHHHHHHHHHHHH
T ss_pred HHCHHHHHHHHHHHH
Confidence 778888888887765
No 45
>2f4w_A Ubiquitin-conjugating enzyme E2, J2; endoplasmic reticulum, ligase, UBL conjugation pathway, structural genomics consortium (SGC); 2.00A {Homo sapiens} SCOP: d.20.1.1
Probab=100.00 E-value=9e-36 Score=260.57 Aligned_cols=123 Identities=20% Similarity=0.379 Sum_probs=104.4
Q ss_pred CCCchHHHHHHHHHHHHHHhcCCCCceEEccCCCcccEEEEEEcCCCCccCCcEEEEEEEcCCCCCCCCCceeeecCccc
Q 039638 37 INPKSELAERIHKEWEILEKNLPSSIFVRASAERIDLMRAVIIGLEGTPYCHGLFFFDIFFPTTYPVTPPLIFYHSYGFD 116 (283)
Q Consensus 37 ~~~~~~~~kRL~kEl~~L~~~~p~gi~v~~~e~~l~~w~~~I~Gp~~TPYegG~F~f~i~fP~~YP~~PP~v~F~t~i~r 116 (283)
...++.+.+||++|+++|++++++||++.++++|++.|+++|.||+||||+||+|+|+|.||++||++||+|+|.|+
T Consensus 9 ~~~~~~a~~RL~kEl~~l~~~~~~~i~~~p~~~nl~~W~~~I~GP~~TpYegG~f~l~i~fP~~YP~~PP~v~f~T~--- 85 (187)
T 2f4w_A 9 KRAPTTATQRLKQDYLRIKKDPVPYICAEPLPSNILEWHYVVRGPEMTPYEGGYYHGKLIFPREFPFKPPSIYMITP--- 85 (187)
T ss_dssp -----CHHHHHHHHHHHHHHSCCTTEEEEEETTEEEEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEECSC---
T ss_pred CCCccHHHHHHHHHHHHHHhCCCCCEEEEEcCCccceeEEEEeCCCCCCCCCCEEEEEEEcCCCCCCCCCcccccCC---
Confidence 35566789999999999999999999999999999999999999999999999999999999999999999999997
Q ss_pred CCCcccCCCceeeecccccccCCccCCCCCCCccCCcccCcccHHHHHHHHHHhhhccCCCC
Q 039638 117 LNPNLHRDGQVSLDLLTINVSHSWWNCKRDSDEKQQWNPQESNIMQVLVSIQHKVLNANPYY 178 (283)
Q Consensus 117 ~HPNv~~~G~VCLslL~~~t~~~w~~~~~~g~~~e~WsP~~~ti~~VL~sIq~Ll~~pnP~~ 178 (283)
|||++.+|+|||++|+ + |. +.|+|+ ++|.+||++|++||.+|+|..
T Consensus 86 -~~~~~~~G~ICL~iL~--~---~~---------~~W~P~-~ti~~vL~si~sll~~p~p~~ 131 (187)
T 2f4w_A 86 -NGRFKCNTRLCLSITD--F---HP---------DTWNPA-WSVSTILTGLLSFMVEKGPTL 131 (187)
T ss_dssp -CSSBCTTSCBC------------------------CCTT-CCHHHHHHHHHHHHHSCCCCT
T ss_pred -CceeccCCeEeeeccc--c---Cc---------cCCCCc-CcHHHHHHHHHHHhcCCCCCC
Confidence 8999999999999997 3 33 789999 799999999999999999953
No 46
>2a4d_A Ubiquitin-conjugating enzyme E2 variant 1; alternative splicing, nuclear protein, UBL conjugation pathway,ubiquitin, ligase, structural genomics; 1.69A {Homo sapiens} SCOP: d.20.1.1 PDB: 2c2v_C 1j7d_A 1j74_A 1zgu_A
Probab=100.00 E-value=2.6e-35 Score=251.91 Aligned_cols=125 Identities=19% Similarity=0.258 Sum_probs=111.1
Q ss_pred CCchHHHHHHHHHHHHHHhcCCCC-ceEEc-cCCC--cccEEEEEEcCCCCccCCcEEEEEEEcCCCCCCCCCceeeecC
Q 039638 38 NPKSELAERIHKEWEILEKNLPSS-IFVRA-SAER--IDLMRAVIIGLEGTPYCHGLFFFDIFFPTTYPVTPPLIFYHSY 113 (283)
Q Consensus 38 ~~~~~~~kRL~kEl~~L~~~~p~g-i~v~~-~e~~--l~~w~~~I~Gp~~TPYegG~F~f~i~fP~~YP~~PP~v~F~t~ 113 (283)
+....+.+||++|+++|++++++| +.+.+ +++| ++.|.++|.||+||||+||+|+|+|.||++||++||+|+|.|+
T Consensus 21 ~v~~p~~~RL~kEl~~l~~~~~~g~~~~~~~~~~d~~l~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~v~F~T~ 100 (160)
T 2a4d_A 21 GVKVPRNFRLLEELEEGQKGVGDGTVSWGLEDDEDMTLTRWTGMIIGPPRTIYENRIYSLKIECGPKYPEAPPFVRFVTK 100 (160)
T ss_dssp CCCHHHHHHHHHHHHHHHSCCTTSSEEEEESSTTCTTCCEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESBC
T ss_pred eeechHHHHHHHHHHHHHhCCCCCcEEEEecCCccccceeeEEEEECCCCCCccCeEEEEEEECCCcCCCCCcEEEEecC
Confidence 344678899999999999999988 67776 5665 8999999999999999999999999999999999999999999
Q ss_pred cccCCCccc-CCCceeeecccccccCCccCCCCCCCccCCcccCcccHHHHHHHHHHhhh-ccCCCCCC
Q 039638 114 GFDLNPNLH-RDGQVSLDLLTINVSHSWWNCKRDSDEKQQWNPQESNIMQVLVSIQHKVL-NANPYYCH 180 (283)
Q Consensus 114 i~r~HPNv~-~~G~VCLslL~~~t~~~w~~~~~~g~~~e~WsP~~~ti~~VL~sIq~Ll~-~pnP~~~e 180 (283)
+ |||||| .+|+|||++|+ . | ++|+|+ ++|.+||++||+||. .||+..+.
T Consensus 101 i--~HPNV~~~~G~ICl~iL~--~---~----------~~WsP~-~ti~~vL~sI~~ll~~~pn~~~P~ 151 (160)
T 2a4d_A 101 I--NMNGVNSSNGVVDPRAIS--V---L----------AKWQNS-YSIKVVLQELRRLMMSKENMKLPQ 151 (160)
T ss_dssp C--CCTTBCTTTCBBCGGGSH--H---H----------HTCCTT-CCHHHHHHHHHHHHTSTTTTTCCC
T ss_pred c--eeCCEECCCCEEehhhcC--C---c----------cCCCcc-CcHHHHHHHHHHHHccCCCCCCCC
Confidence 9 999999 79999999998 3 2 589999 799999999999995 57765433
No 47
>2hlw_A Ubiquitin-conjugating enzyme E2 variant 1; ubiquitin-conjugating enzyme variant, UBC13, HUBC13, polyubiquitination, ligase, signaling protein; NMR {Homo sapiens}
Probab=100.00 E-value=4.1e-35 Score=252.94 Aligned_cols=144 Identities=17% Similarity=0.231 Sum_probs=120.0
Q ss_pred ccccCccccCCcchhcccccCCC-CchHHHHHHHHHHHHHHhcCCCC-ceEEc-cCCC--cccEEEEEEcCCCCccCCcE
Q 039638 16 ARIPTHLLNQNHHFIDHKTININ-PKSELAERIHKEWEILEKNLPSS-IFVRA-SAER--IDLMRAVIIGLEGTPYCHGL 90 (283)
Q Consensus 16 ~~v~~~~~~~~h~~~~~~~~~~~-~~~~~~kRL~kEl~~L~~~~p~g-i~v~~-~e~~--l~~w~~~I~Gp~~TPYegG~ 90 (283)
+.+++. ++||+...+..... ....+.+||++|+++|++++++| +.+.+ +++| ++.|+++|.||+||||+||+
T Consensus 11 ~~~s~~---~~~~~~~p~~~~~~~v~~p~~~RL~kEl~~l~~~~~~g~~~~~~~~~~d~nl~~W~~~I~GP~~TpYegG~ 87 (170)
T 2hlw_A 11 KSQSKL---SDEGRLEPRKFHCKGVKVPRNFRLLEELEEGQKGVGDGTVSWGLEDDEDMTLTRWTGMIIGPPRTIYENRI 87 (170)
T ss_dssp CCSCSS---SCSSCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCGGGCEEEEESSTTCSSCCBEEEEECCCSSSTTSSCC
T ss_pred cccccc---ccccccCCccccCCcccCHHHHHHHHHHHHHHhCCCCCcEEEEecCcccccceeeEEEEeCCCCCCcCCcE
Confidence 344555 77887643333222 24557899999999999999988 56776 5665 89999999999999999999
Q ss_pred EEEEEEcCCCCCCCCCceeeecCcccCCCccc-CCCceeeecccccccCCccCCCCCCCccCCcccCcccHHHHHHHHHH
Q 039638 91 FFFDIFFPTTYPVTPPLIFYHSYGFDLNPNLH-RDGQVSLDLLTINVSHSWWNCKRDSDEKQQWNPQESNIMQVLVSIQH 169 (283)
Q Consensus 91 F~f~i~fP~~YP~~PP~v~F~t~i~r~HPNv~-~~G~VCLslL~~~t~~~w~~~~~~g~~~e~WsP~~~ti~~VL~sIq~ 169 (283)
|+|+|.||++||++||+|+|.|++ |||||| .+|+|||++|+ . | +.|+|+ ++|.+||++||+
T Consensus 88 f~l~i~fp~~YP~~PP~v~F~T~i--~HPNV~~~~G~ICl~iL~--~---~----------~~WsP~-~ti~~vL~sI~~ 149 (170)
T 2hlw_A 88 YSLKIECGPKYPEAPPFVRFVTKI--NMNGVNSSNGVVDPRAIS--V---L----------AKWQNS-YSIKVVLQELRR 149 (170)
T ss_dssp BCEEEECCSSCTTSCCEEEECBCC--CCSSBCSSSCBBCTTTCH--H---H----------HTCCSS-CCHHHHHHHHHH
T ss_pred EEEEEECCCCCCCCCCeeEEeccc--ccCCEeCCCCEEEhhhcC--C---C----------CCCCcc-CcHHHHHHHHHH
Confidence 999999999999999999999999 999999 89999999998 3 2 589999 799999999999
Q ss_pred hhhc-cCCCCCC
Q 039638 170 KVLN-ANPYYCH 180 (283)
Q Consensus 170 Ll~~-pnP~~~e 180 (283)
||.+ ||+..+.
T Consensus 150 ll~~~pn~~~P~ 161 (170)
T 2hlw_A 150 LMMSKENMKLPQ 161 (170)
T ss_dssp HHHSTTTSSSCC
T ss_pred HHccCCCCCCCC
Confidence 9975 7765433
No 48
>1yf9_A Ubiquitin carrier protein 4; SGPP, structural genomics, PSI, protein structure initiative ubiquitin conjugating enzyme; 2.00A {Leishmania major} SCOP: d.20.1.1
Probab=100.00 E-value=7.4e-36 Score=257.72 Aligned_cols=139 Identities=21% Similarity=0.389 Sum_probs=122.0
Q ss_pred HHHHHHHHHHHHHHhcCCCCceEEccCCCcccEEEEEEcCCCCccCCcEEEEEEEcCCCCCCCCCceeeecCcccCCCcc
Q 039638 42 ELAERIHKEWEILEKNLPSSIFVRASAERIDLMRAVIIGLEGTPYCHGLFFFDIFFPTTYPVTPPLIFYHSYGFDLNPNL 121 (283)
Q Consensus 42 ~~~kRL~kEl~~L~~~~p~gi~v~~~e~~l~~w~~~I~Gp~~TPYegG~F~f~i~fP~~YP~~PP~v~F~t~i~r~HPNv 121 (283)
.+.+||++|++.|++++. ++ ..++|+..|.++|.||+||||+||+|+|+|.||++||++||+|+|.|++ |||||
T Consensus 12 ~~~~RL~~El~~l~~~~~-~v---~~~~~l~~w~~~I~GP~~tpyegg~f~~~i~fp~~YP~~PP~v~F~t~i--~HPNi 85 (171)
T 1yf9_A 12 RSNRRREMDYMRLCNSTR-KV---YPSDTVAEFWVEFKGPEGTPYEDGTWMLHVQLPSDYPFKSPSIGFCNRI--LHPNV 85 (171)
T ss_dssp -CCHHHHHHHHHHHSSSS-CE---EECSSTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSCC--CBTTB
T ss_pred cHHHHHHHHHHHHHhCCC-CC---CCCCCceEEEEEEECCCCCCccCceEEEEEEcCCCCCCCCCeEEeecCc--ccccC
Confidence 567999999999999874 44 3578999999999999999999999999999999999999999999999 99999
Q ss_pred c-CCCceeeecccccccCCccCCCCCCCccCCcccCcccHHHHHHHH-HHhhhccCCC---CCCCCCCCcCCHHHHHHHH
Q 039638 122 H-RDGQVSLDLLTINVSHSWWNCKRDSDEKQQWNPQESNIMQVLVSI-QHKVLNANPY---YCHKGHPQKSNKEVFRLNC 196 (283)
Q Consensus 122 ~-~~G~VCLslL~~~t~~~w~~~~~~g~~~e~WsP~~~ti~~VL~sI-q~Ll~~pnP~---~~e~~~~~~~n~~~f~~~~ 196 (283)
| .+|+|||++|+ +.|+|+ ++|.+||++| |+||.+|+|. +.++|..+..|.+.|.+.|
T Consensus 86 ~~~~G~iCl~iL~-----------------~~W~p~-~~i~~vL~sil~~ll~~Pn~~~p~n~~aa~~~~~d~~~y~~~v 147 (171)
T 1yf9_A 86 DERSGSVCLDVIN-----------------QTWTPM-YQLENIFDVFLPQLLRYPNPSDPLNVQAAHLLHADRVGFDALL 147 (171)
T ss_dssp CTTTCBBCHHHHH-----------------HHCCTT-CCTHHHHHTHHHHHHHSCCSSCCSCHHHHHHHHHCHHHHHHHH
T ss_pred cccCCeEeccccc-----------------cCCCCC-CcHHHHHHHHHHHHHhCCCCCCcccHHHHHHHHHCHHHHHHHH
Confidence 9 59999999998 689999 7999999997 7999998864 3455566677888888888
Q ss_pred HHHHHHHc
Q 039638 197 QAMLVMLQ 204 (283)
Q Consensus 197 ~~m~~~~~ 204 (283)
+.++..++
T Consensus 148 r~~~~~~a 155 (171)
T 1yf9_A 148 REHVSTHA 155 (171)
T ss_dssp HHHHHHHC
T ss_pred HHHHHHHc
Confidence 88777665
No 49
>1jat_B Ubiquitin-conjugating enzyme variant MMS2; UEV, ligase; 1.60A {Saccharomyces cerevisiae} SCOP: d.20.1.1 PDB: 2gmi_B
Probab=100.00 E-value=7.9e-35 Score=242.86 Aligned_cols=122 Identities=18% Similarity=0.261 Sum_probs=106.5
Q ss_pred hHHHHHHHHHHHHHHhc-CCCCceEEcc-CC--CcccEEEEEEcCCCCccCCcEEEEEEEcCCCCCCCCCceeeecCccc
Q 039638 41 SELAERIHKEWEILEKN-LPSSIFVRAS-AE--RIDLMRAVIIGLEGTPYCHGLFFFDIFFPTTYPVTPPLIFYHSYGFD 116 (283)
Q Consensus 41 ~~~~kRL~kEl~~L~~~-~p~gi~v~~~-e~--~l~~w~~~I~Gp~~TPYegG~F~f~i~fP~~YP~~PP~v~F~t~i~r 116 (283)
..+.+||++|+++|+++ ++.||++.+. ++ |++.|+++|.||+||||+||+|+|+|.||++||++||+|+|.|++
T Consensus 5 ~~~~~RL~kEl~~l~~~~~~~~~~~~~~~~~d~nl~~w~~~i~GP~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i-- 82 (138)
T 1jat_B 5 VPRNFRLLEELEKGEKGFGPESCSYGLADSDDITMTKWNGTILGPPHSNHENRIYSLSIDCGPNYPDSPPKVTFISKI-- 82 (138)
T ss_dssp CCHHHHHHHHHHHHHC----CCEEEEESSTTCTTCCEEEEEEECCSSSTTTTCEEEEEEECCTTTTTSCCEEEESBCC--
T ss_pred HHHHHHHHHHHHHHHhcCCCCCEEEEeCCCCCCcceEEEEEEECCCCCCccceEEEEEEECCCCCCCCCCceEEEccc--
Confidence 34568999999999998 7889999884 34 499999999999999999999999999999999999999999999
Q ss_pred CCCcccCC-Cce--eeecccccccCCccCCCCCCCccCCcccCcccHHHHHHHHHHhhhccCCC---CCCCCC
Q 039638 117 LNPNLHRD-GQV--SLDLLTINVSHSWWNCKRDSDEKQQWNPQESNIMQVLVSIQHKVLNANPY---YCHKGH 183 (283)
Q Consensus 117 ~HPNv~~~-G~V--CLslL~~~t~~~w~~~~~~g~~~e~WsP~~~ti~~VL~sIq~Ll~~pnP~---~~e~~~ 183 (283)
|||||+.+ |+| ||++|+ +|+|+ ++|.+||++||+||.+|||. +.++|.
T Consensus 83 ~HPnv~~~~G~i~~cL~~l~------------------~W~p~-~~i~~vl~~i~~ll~~pn~~~p~~~~~~~ 136 (138)
T 1jat_B 83 NLPCVNPTTGEVQTDFHTLR------------------DWKRA-YTMETLLLDLRKEMATPANKKLRQPKEGE 136 (138)
T ss_dssp CCTTBCTTTCBBCTTSHHHH------------------TCCTT-CCHHHHHHHHHHHHTSHHHHTSCCCCTTC
T ss_pred ccCCEeCCCCEEeeecccCC------------------CCCCc-CcHHHHHHHHHHHHcCCCCCCCCCcchhh
Confidence 99999976 999 999886 58899 79999999999999998764 455554
No 50
>4ds2_A Ubiquitin-conjugating enzyme E2, putative; structural genomics, PSI, protein structure initiative; 2.63A {Trypanosoma cruzi}
Probab=100.00 E-value=2.8e-35 Score=252.90 Aligned_cols=136 Identities=14% Similarity=0.256 Sum_probs=114.4
Q ss_pred HHHHHHHHHHHHHHhcC------------CCCceEEccCCCcccEEEEEEcCCCCccC--CcEEEEEEEcCCCCCCCCCc
Q 039638 42 ELAERIHKEWEILEKNL------------PSSIFVRASAERIDLMRAVIIGLEGTPYC--HGLFFFDIFFPTTYPVTPPL 107 (283)
Q Consensus 42 ~~~kRL~kEl~~L~~~~------------p~gi~v~~~e~~l~~w~~~I~Gp~~TPYe--gG~F~f~i~fP~~YP~~PP~ 107 (283)
.+.+||++|+++|++++ +.||++.++++|++.|+++|.||+||||+ ||+|+|+|.||++||++||+
T Consensus 8 ~a~kRL~kEl~~l~~~~~~~~~~~~~~~~~~~i~~~~~~~nl~~w~~~i~Gp~~tpye~~gg~f~~~i~fp~~YP~~pP~ 87 (167)
T 4ds2_A 8 ISNKRIIKDLKLLLEEVDANNEANSSGSPHSTAIFSVDTDTIYNWILKVKAPADSVYGGAGNTYQLSVLFSDDYPHEPPT 87 (167)
T ss_dssp CCCHHHHHHHHHHHHHHHHHTTC----CCSSCEEEEEEESSTTEEEEEEECCTTSGGGTTCCEEEEEEECCTTTTTSCCE
T ss_pred HHHHHHHHHHHHHHhCcccccccccccCCCCcEEEEeCCCcccEEEEEEECCCCCCccCCCCEEEEEEECCCCCCCCCCE
Confidence 45789999999999987 78999999999999999999999999999 99999999999999999999
Q ss_pred eeeecCcccCCCcccCCCceeeecccccccCCccCCCCCCCccCCcccCcccHHHHHH-HHHHhhhc--cCC---CCCCC
Q 039638 108 IFYHSYGFDLNPNLHRDGQVSLDLLTINVSHSWWNCKRDSDEKQQWNPQESNIMQVLV-SIQHKVLN--ANP---YYCHK 181 (283)
Q Consensus 108 v~F~t~i~r~HPNv~~~G~VCLslL~~~t~~~w~~~~~~g~~~e~WsP~~~ti~~VL~-sIq~Ll~~--pnP---~~~e~ 181 (283)
|+|.|++ |||||+.+|+|||++|+ ++|+|+ ++|.+||+ .|++|+.. |+| .+.|+
T Consensus 88 v~f~t~i--~HPnv~~~G~iCl~il~-----------------~~W~p~-~~i~~vll~~l~~l~~~~~pn~~~p~n~ea 147 (167)
T 4ds2_A 88 VRFVTPV--YSPLVTGEGGICDRMVN-----------------DFWTPD-QHASDVIKLVLDRVFSQYKSRRDDDVNPEA 147 (167)
T ss_dssp EEESSCC--CCSSCCTTSCCCTHHHH-----------------TTCCTT-SCHHHHHHHHHHHHHTSTTSCCSCCCCHHH
T ss_pred EEEeCCc--ccccCCCCCEEEcccCc-----------------CCCCCC-CChHHHHHHHHHHHHhcCCCCCcchHhHHH
Confidence 9999999 99999999999999998 689999 79999754 57777765 343 23334
Q ss_pred CCCCcCCHHHHHHHHH
Q 039638 182 GHPQKSNKEVFRLNCQ 197 (283)
Q Consensus 182 ~~~~~~n~~~f~~~~~ 197 (283)
|..+..|++.|.+.|+
T Consensus 148 a~l~~~d~~~f~~~vr 163 (167)
T 4ds2_A 148 RHYLEKFPQDFAARVR 163 (167)
T ss_dssp HHHHHHCHHHHHHHHT
T ss_pred HHHHHHCHHHHHHHHh
Confidence 4444455555544443
No 51
>1zuo_A Hypothetical protein LOC92912; ligase, ubiquitin-conjugating enzyme, structural genomics consortium ,SGC; 1.80A {Homo sapiens} SCOP: d.20.1.1 PDB: 2qgx_A
Probab=100.00 E-value=2.3e-34 Score=251.54 Aligned_cols=140 Identities=14% Similarity=0.238 Sum_probs=120.4
Q ss_pred CCCCchHHHHHHHHHHHHHHhcC---CCCceEEccCCCcccEEEEEEcC-CCCccCC-----------cEEEEEEEcCCC
Q 039638 36 NINPKSELAERIHKEWEILEKNL---PSSIFVRASAERIDLMRAVIIGL-EGTPYCH-----------GLFFFDIFFPTT 100 (283)
Q Consensus 36 ~~~~~~~~~kRL~kEl~~L~~~~---p~gi~v~~~e~~l~~w~~~I~Gp-~~TPYeg-----------G~F~f~i~fP~~ 100 (283)
....+..+.+||++|+++|++++ +.||++.+.++|++.|.++|.|| ++|||+| |.|.|+|.||++
T Consensus 21 ~~~~s~~a~~RL~kEl~~l~~~~~~~~~~~~~~p~~dnl~~W~~~I~Gp~~~tpy~ggl~~~~~~~g~g~f~l~i~fp~~ 100 (186)
T 1zuo_A 21 AVSGSVQASDRLMKELRDIYRSQSYKTGIYSVELINDSLYDWHVKLQKVDPDSPLHSDLQILKEKEGIEYILLNFSFKDN 100 (186)
T ss_dssp ---CCHHHHHHHHHHHHHHHTSHHHHTTSEEEEEETTEEEEEEEEECCCCTTSHHHHHHHHHHHHHSCCSEEEEEECCTT
T ss_pred cccccHHHHHHHHHHHHHHHhCCCCCCCcEEEEEcCCccceeEEEEECCCCCCCccccchhhccccCceEEEEEEECCCC
Confidence 34457789999999999999988 68899999999999999999998 9999998 899999999999
Q ss_pred CCCCCCceeeecCcccCCC-cccCCCceeeecccccccCCccCCCCCCCccCCcccCcccHHHHHHHHHHhhhccCCCCC
Q 039638 101 YPVTPPLIFYHSYGFDLNP-NLHRDGQVSLDLLTINVSHSWWNCKRDSDEKQQWNPQESNIMQVLVSIQHKVLNANPYYC 179 (283)
Q Consensus 101 YP~~PP~v~F~t~i~r~HP-Nv~~~G~VCLslL~~~t~~~w~~~~~~g~~~e~WsP~~~ti~~VL~sIq~Ll~~pnP~~~ 179 (283)
||++||+|+|.|++ ||| |||.+|.|||++|+ . ++|+|+ ++|.+||++||+||.+|++...
T Consensus 101 YP~~PP~V~f~tpi--~hPnnV~~~G~ICL~iL~--~--------------~~WsP~-~ti~~VL~sI~slL~~p~a~~~ 161 (186)
T 1zuo_A 101 FPFDPPFVRVVLPV--LSGGYVLGGGALCMELLT--K--------------QGWSSA-YSIESVIMQINATLVKGKARVQ 161 (186)
T ss_dssp TTSSCCEEEEEESC--EESTTBCGGGBBCCGGGS--T--------------TTCCTT-SCHHHHHHHHHHHHHHTTCEEC
T ss_pred CCCCCCeEEEeCCc--cCCCccCCCCcEEeccCC--C--------------CCCCCc-CcHHHHHHHHHHHHcCCChhHh
Confidence 99999999999999 899 69999999999997 3 689999 7999999999999999987532
Q ss_pred CCCCCCcCCHHHHHH
Q 039638 180 HKGHPQKSNKEVFRL 194 (283)
Q Consensus 180 e~~~~~~~n~~~f~~ 194 (283)
--++...|+......
T Consensus 162 ~~~~~~~Y~~~~~~~ 176 (186)
T 1zuo_A 162 FGANKNQYNLARAQQ 176 (186)
T ss_dssp TTCCTTCCCHHHHHH
T ss_pred hccCHHHHhHHHHHH
Confidence 222344577554333
No 52
>2z6o_A UFM1-conjugating enzyme 1; UFC1, ubiquitin, UBL, polymorphism, UBL conjugation pathway, ligase; 1.60A {Homo sapiens} PDB: 2z6p_A 1ywz_A 2in1_A 2k07_A 3e2g_A 3evx_A
Probab=99.91 E-value=2.1e-25 Score=190.31 Aligned_cols=105 Identities=20% Similarity=0.320 Sum_probs=94.3
Q ss_pred CchHHHHHHHHHHHHHHhcCCCCceEEccCCCcccEEEEEEcCCCCccCCc----------EEEEEEEcCCCCCCCCCce
Q 039638 39 PKSELAERIHKEWEILEKNLPSSIFVRASAERIDLMRAVIIGLEGTPYCHG----------LFFFDIFFPTTYPVTPPLI 108 (283)
Q Consensus 39 ~~~~~~kRL~kEl~~L~~~~p~gi~v~~~e~~l~~w~~~I~Gp~~TPYegG----------~F~f~i~fP~~YP~~PP~v 108 (283)
....|.+||++|++.|++ ++.+..+|+..|.++|.||+||||+|| .|.++|.||.+||++||+|
T Consensus 29 ~~~~w~~RL~eE~k~L~k------~v~p~k~n~~~W~~ii~Gp~gT~WeGgcw~~~~~~~y~F~L~~~fPe~YP~~PPeV 102 (172)
T 2z6o_A 29 DRELWVQRLKEEYQSLIR------YVENNKNADNDWFRLESNKEGTRWFGKCWYIHDLLKYEFDIEFDIPITYPTTAPEI 102 (172)
T ss_dssp CTHHHHHHHHHHHHHHHH------HHHHHHHTTCCCEEEEECTTSCEEEEEEEEEETTEEEEEEEEEECCTTTTTSCCCC
T ss_pred ccHHHHHHHHHHHHHHHH------HhccCccccceeEEeecCCCCCcccCcccccccccceEEEEEEECCCCCCCCCCee
Confidence 357889999999999998 467777899999999999999999999 9999999999999999999
Q ss_pred eeecC-cccCCCcccCCCceeeecccccccCCccCCCCCCCccCCcccCcccHHHHHH
Q 039638 109 FYHSY-GFDLNPNLHRDGQVSLDLLTINVSHSWWNCKRDSDEKQQWNPQESNIMQVLV 165 (283)
Q Consensus 109 ~F~t~-i~r~HPNv~~~G~VCLslL~~~t~~~w~~~~~~g~~~e~WsP~~~ti~~VL~ 165 (283)
+|.+. + ||||||.+|+|||++|..+. |+ .|+|. ++|.+||.
T Consensus 103 ~F~~~~~--~hpnmY~~G~ICLdIL~kp~---Ws----------~~~P~-~~IahiL~ 144 (172)
T 2z6o_A 103 AVPELDG--KTAKMYRGGKICLTDHFKPL---WA----------RNVPK-FGLAHLMA 144 (172)
T ss_dssp BCGGGTT--TCSSBCTTSBBCCCTTHHHH---HH----------HHTTS-CCHHHHHH
T ss_pred eeCCCCC--CCCCCCCCCcEechhhcccc---cc----------ccCCc-cCHHHHHh
Confidence 99997 6 99999999999999995222 64 78898 79999984
No 53
>3r3q_A Suppressor protein STP22 of temperature-sensitive factor receptor and arginine permease...; endosomal sorting, ESCRT-I; 1.45A {Saccharomyces cerevisiae} SCOP: d.20.1.2 PDB: 3r42_A 1uzx_A*
Probab=99.72 E-value=1.5e-17 Score=142.20 Aligned_cols=113 Identities=18% Similarity=0.247 Sum_probs=92.5
Q ss_pred HHHHHHHHHHHhcCC---CCceEEccCCCcccEEEEEEcCCCCccCCcE---EEEEEEcCCCCCCCCCceeeecC-----
Q 039638 45 ERIHKEWEILEKNLP---SSIFVRASAERIDLMRAVIIGLEGTPYCHGL---FFFDIFFPTTYPVTPPLIFYHSY----- 113 (283)
Q Consensus 45 kRL~kEl~~L~~~~p---~gi~v~~~e~~l~~w~~~I~Gp~~TPYegG~---F~f~i~fP~~YP~~PP~v~F~t~----- 113 (283)
+|..+|+..+.+.-| +...+...++....+-..+.|+-.++|+||. |.+.|.||.+||++||.|.|.+.
T Consensus 31 ~~~~~dv~~~l~~yp~L~p~t~~yt~~dG~~~~Ll~l~Gtipv~y~g~~~Yn~pi~IwlP~~YP~~PP~v~v~p~t~~m~ 110 (162)
T 3r3q_A 31 RTTFHDSLALLDNFHSLRPRTRVFTHSDGTPQLLLSIYGTISTGEDGSSPHSIPVIMWVPSMYPVKPPFISINLENFDMN 110 (162)
T ss_dssp HHHHHHHHHHHHHCTTEEEEEEEEECTTSCEEEEEEEEEEEECSCCTTSCCEEEEEEECCTTTTTSCCEEEECGGGCCTT
T ss_pred hHHHHHHHHHHHhCCCCceeeeeEEcCCCChheEEEEECccCccccCcccccccEEEEeCcccCCCCCEEEEECCCcccc
Confidence 566778777755433 2233344567777788888998889999999 88999999999999999988651
Q ss_pred -----cccC-CCcccCCCceeeecccccccCCccCCCCCCCccCCcccCcccHHHHHHHHHHhhhccCCC
Q 039638 114 -----GFDL-NPNLHRDGQVSLDLLTINVSHSWWNCKRDSDEKQQWNPQESNIMQVLVSIQHKVLNANPY 177 (283)
Q Consensus 114 -----i~r~-HPNv~~~G~VCLslL~~~t~~~w~~~~~~g~~~e~WsP~~~ti~~VL~sIq~Ll~~pnP~ 177 (283)
+ + |||||.+|+||+++|. .|+|..++|.+||.+|+++|.+|||+
T Consensus 111 ~~~~~I--~~hpnVD~~G~I~lpyL~------------------~W~p~~s~L~~ll~~l~~lf~ep~~d 160 (162)
T 3r3q_A 111 TISSSL--PIQEYIDSNGWIALPILH------------------AWDPAAMNLIMVVQELMSLLHEPPQD 160 (162)
T ss_dssp TSCTTS--THHHHBCTTSBBCCGGGG------------------SCCGGGCCHHHHHHHHHHTTSCCCCC
T ss_pred cccccc--CCCCCCCCCCcEeCcccc------------------cCCCCcCcHHHHHHHHHHHhcCCCCC
Confidence 4 6 9999999999999997 58895589999999999999999985
No 54
>3kpa_A Probable ubiquitin fold modifier conjugating ENZY; UBL conjugation pathway, ligase, structural genomics, PSI; 2.20A {Leishmania major} SCOP: d.20.1.4
Probab=99.63 E-value=1.4e-16 Score=133.41 Aligned_cols=88 Identities=18% Similarity=0.251 Sum_probs=75.2
Q ss_pred CchHHHHHHHHHHHHHHhcCCCCceEEccCCCcccEEEEEEcCCCCccCCc----------EEEEEEEcCCCCCCCCCce
Q 039638 39 PKSELAERIHKEWEILEKNLPSSIFVRASAERIDLMRAVIIGLEGTPYCHG----------LFFFDIFFPTTYPVTPPLI 108 (283)
Q Consensus 39 ~~~~~~kRL~kEl~~L~~~~p~gi~v~~~e~~l~~w~~~I~Gp~~TPYegG----------~F~f~i~fP~~YP~~PP~v 108 (283)
....|..||..|+..|-+ +|....++-..|..++.||+||+|.|+ .|.+.+.||.+||..||.|
T Consensus 31 d~~~w~~RlkeEy~alI~------yv~~nK~~d~dWf~~~sn~~GT~W~G~cw~~~~~~kyeFkLefdiP~tYP~tPPeI 104 (168)
T 3kpa_A 31 DGDKWTARLKEEYASLIT------YVEHNKASDSHWFHLESNPQGTRWYGTCWTYYKNEKYEFEMNFDIPVTYPQAPPEI 104 (168)
T ss_dssp STHHHHHHHHHHHHHHHH------HHHHHHHTTCCCEEEEECTTSCEEEEEEEEEETTEEEEEEEEEECCTTTTTSCCCC
T ss_pred CHHHHHHHHHHHHHHHHH------HHHhcccccCCeeeecCCCCCCcccCccceeeccceeEEEEEEeCCccCCCCCCEe
Confidence 346699999999999965 444433444679999999999999999 8999999999999999999
Q ss_pred eeecCcccCCCcccCCCceeeeccc
Q 039638 109 FYHSYGFDLNPNLHRDGQVSLDLLT 133 (283)
Q Consensus 109 ~F~t~i~r~HPNv~~~G~VCLslL~ 133 (283)
.|.+..+ +|||+|.+|+|||+++-
T Consensus 105 ~Fp~ldg-kt~kmYr~GkICLdIhw 128 (168)
T 3kpa_A 105 ALPELEG-KTVKMYRGGKICMTTHF 128 (168)
T ss_dssp BCGGGTT-TCSSEETTTEECCCTTH
T ss_pred ecccccC-cCccccCCCcEEecccc
Confidence 9999632 99999999999998763
No 55
>3obq_A Tumor susceptibility gene 101 protein; protein transprot, ubiquitin binding, protein transport; 1.40A {Homo sapiens} SCOP: d.20.1.2 PDB: 3obs_A 3obu_A 3obx_A 3p9g_A* 3p9h_A* 2f0r_A 1kpp_A 1kpq_A 1m4p_A 1m4q_A 1s1q_A
Probab=99.36 E-value=8.5e-13 Score=110.89 Aligned_cols=107 Identities=14% Similarity=0.292 Sum_probs=82.0
Q ss_pred HHHHHHHHHhcCCCCceE--E---ccCCCcccEEEEEEcCCCCccCCcEEEE--EEEcCCCCCCCCCceeeecC----cc
Q 039638 47 IHKEWEILEKNLPSSIFV--R---ASAERIDLMRAVIIGLEGTPYCHGLFFF--DIFFPTTYPVTPPLIFYHSY----GF 115 (283)
Q Consensus 47 L~kEl~~L~~~~p~gi~v--~---~~e~~l~~w~~~I~Gp~~TPYegG~F~f--~i~fP~~YP~~PP~v~F~t~----i~ 115 (283)
..+|+..+.+.-| +... . -...++..|.++|. .+|+|+.|.+ .|.||.+||++||.| |.++ .+
T Consensus 25 t~~dv~~vl~~yp-~L~p~~~~y~G~~~~LL~l~GtIp----v~y~g~~y~iPi~Iwlp~~YP~~pP~v-fv~pt~~m~I 98 (146)
T 3obq_A 25 TVRETVNVITLYK-DLKPVLDSYGTGSRELMNLTGTIP----VPYRGNTYNIPICLWLLDTYPYNPPIC-FVKPTSSMTI 98 (146)
T ss_dssp HHHHHHHHHHHCT-TEEEEEEESSSTTCEEEEEEEEEE----EECSSCEEEEEEEEECCTTTTTSCCEE-EECCCTTEEE
T ss_pred hHHHHHHHHHhCC-CCceEeeeeeCChheEEEEEEEee----eeecCccccceEEEEeCccCCCCCCEE-EEeCCCCCEE
Confidence 3456666655433 2211 1 12357888888887 7899999985 999999999999999 6654 23
Q ss_pred cCCCcccCCCceeeecccccccCCccCCCCCCCccCCcccCcccHHHHHHHHHHhhhccCCC
Q 039638 116 DLNPNLHRDGQVSLDLLTINVSHSWWNCKRDSDEKQQWNPQESNIMQVLVSIQHKVLNANPY 177 (283)
Q Consensus 116 r~HPNv~~~G~VCLslL~~~t~~~w~~~~~~g~~~e~WsP~~~ti~~VL~sIq~Ll~~pnP~ 177 (283)
+.|||||.+|+||++.|. .|++..++|.+++.++++++...-|-
T Consensus 99 ~~~~~Vd~~G~i~lpyL~------------------~W~~~~snL~~ll~~l~~~F~~epPv 142 (146)
T 3obq_A 99 KTGKHVDANGKIYLPYLH------------------EWKHPQSDLLGLIQVMIVVFGDEPPV 142 (146)
T ss_dssp CCBTTBCTTCBBCCHHHH------------------TCCTTTCCHHHHHHHHHHHHHHSCSE
T ss_pred CCCCCCCCCCCEeccccc------------------ccCCCCCCHHHHHHHHHHHHhhCCCC
Confidence 589999999999999997 37775589999999999999876663
No 56
>2ebm_A RWD domain-containing protein 1; alpha+beta sandwich fold, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=94.75 E-value=0.13 Score=40.77 Aligned_cols=68 Identities=22% Similarity=0.214 Sum_probs=44.1
Q ss_pred HHHHHHHHHHHHHhcCCCCceEEccCCCcccEEEEEEcCCCCccCCcEEEEEEEcCCCCCCCCCceeeec
Q 039638 43 LAERIHKEWEILEKNLPSSIFVRASAERIDLMRAVIIGLEGTPYCHGLFFFDIFFPTTYPVTPPLIFYHS 112 (283)
Q Consensus 43 ~~kRL~kEl~~L~~~~p~gi~v~~~e~~l~~w~~~I~Gp~~TPYegG~F~f~i~fP~~YP~~PP~v~F~t 112 (283)
.......|+..|+.--+..+.+. .+....+.+.|..-.+..-+.-.+.+.|.||++||..||.|...+
T Consensus 11 ~~e~q~~EleaL~sIy~d~~~~~--~~~~~~~~i~i~~~~~~~~~~~~~~L~v~~p~~YP~~~P~i~l~~ 78 (128)
T 2ebm_A 11 YGEEQRNELEALESIYPDSFTVL--SENPPSFTITVTSEAGENDETVQTTLKFTYSEKYPDEAPLYEIFS 78 (128)
T ss_dssp HHHHHHHHHHHHHHHCSSSEEEC--CSSSCEEEECCBCCCCTTSCCCBEEEEEECCSSTTTSCCEEEEEE
T ss_pred hHHHHHHHHHHHHHHccCceEEc--cCCCCEEEEEEecCCCCCcCceeEEEEEEeCCCCCCCCceEEEEc
Confidence 34567889999987666555432 222344555554222222233478899999999999999988765
No 57
>2day_A Ring finger protein 25; ligase, metal-binding, UB1 conjugation, UB1 conjugation pathway, RWD domain, alpha+beta sandwich fold, structural genomics; NMR {Homo sapiens} SCOP: d.20.1.3 PDB: 2dmf_A
Probab=94.27 E-value=0.26 Score=38.93 Aligned_cols=68 Identities=16% Similarity=0.076 Sum_probs=42.8
Q ss_pred HHHHHHHHHHhcCCCCceEEccCC--CcccEEEEEEcCCCCcc--CCcEEEEEEEcCCCCCCCCCceeeecC
Q 039638 46 RIHKEWEILEKNLPSSIFVRASAE--RIDLMRAVIIGLEGTPY--CHGLFFFDIFFPTTYPVTPPLIFYHSY 113 (283)
Q Consensus 46 RL~kEl~~L~~~~p~gi~v~~~e~--~l~~w~~~I~Gp~~TPY--egG~F~f~i~fP~~YP~~PP~v~F~t~ 113 (283)
....|+..|+.--+..+.+..... ....+.+.|..+.+..- ..-.+.+.|.+|++||..||.|...+.
T Consensus 12 ~~~~EleaL~SIY~de~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~~~~~L~~~~p~~YP~~~P~i~~~~~ 83 (128)
T 2day_A 12 VLPSEVEVLESIYLDELQVIKGNGRTSPWEIYITLHPATAEDQDSQYVCFTLVLQVPAEYPHEVPQISIRNP 83 (128)
T ss_dssp HHHHHHHHHHHHSTTTEEEECCTTSSCCEEEEEEECCSCCSSSSCCCCEEEEEEEECSSTTSSCCEEEEEEE
T ss_pred HHHHHHHHHHHHCCCceEEecCCCCCCCeEEEEEEecCCCCCccccceeEEEEEEcCCCCCCCCCCeEEEcC
Confidence 578899999876665554432222 23334444432222111 124688999999999999999988763
No 58
>2yz0_A Serine/threonine-protein kinase GCN2; A-B-B-B-B-A-A, amino acid starvation signal response, EIF2alpha kinase, transferase; NMR {Saccharomyces cerevisiae}
Probab=93.22 E-value=0.55 Score=37.51 Aligned_cols=69 Identities=12% Similarity=0.131 Sum_probs=44.0
Q ss_pred HHHHHHHHHHHHHhcCCCCceEEccC-------CCcccEEEEEEcCCCCccCCcEEEEEEEcCCCCCCCCCceeeecC
Q 039638 43 LAERIHKEWEILEKNLPSSIFVRASA-------ERIDLMRAVIIGLEGTPYCHGLFFFDIFFPTTYPVTPPLIFYHSY 113 (283)
Q Consensus 43 ~~kRL~kEl~~L~~~~p~gi~v~~~e-------~~l~~w~~~I~Gp~~TPYegG~F~f~i~fP~~YP~~PP~v~F~t~ 113 (283)
...+-..|+..|+.--+..+. .... +....+.+.|.+..+ +-..-.+.+.|.+|++||..||.|...+.
T Consensus 11 ~~e~q~~EleaL~SIY~d~~~-~~~~~~~~~~~~~~~~f~I~l~~~~~-~~~~~~~~L~~~~p~~YP~~~P~i~l~~~ 86 (138)
T 2yz0_A 11 YYEIQCNELEAIRSIYMDDFT-DLTKRKSSWDKQPQIIFEITLRSVDK-EPVESSITLHFAMTPMYPYTAPEIEFKNV 86 (138)
T ss_dssp HHHHHHHHHHHHHTTSSSSEE-CCSTTSSSSCSSCCSCEEEEEECSSC-SSCCCEEEEEEECCSSTTSSCCEEEEECC
T ss_pred hHHHHHHHHHHHHHHChhhhe-ecccccccccCCCCcEEEEEEecCCC-CCCceEEEEEEECCCCCCCCCCeEEEecC
Confidence 345567788888765554432 2222 124556677764332 11234788999999999999999998653
No 59
>1ukx_A GCN2, GCN2 EIF2alpha kinase; UBC-like fold, triple beta-turns, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: d.20.1.3
Probab=92.40 E-value=0.71 Score=36.67 Aligned_cols=71 Identities=18% Similarity=0.145 Sum_probs=43.8
Q ss_pred hHHHHHHHHHHHHHHhcCCCCceEEccCC-----CcccEEEEEEcCCC-C-ccCCcEEEEEEEcCCCCCCCCCceeeec
Q 039638 41 SELAERIHKEWEILEKNLPSSIFVRASAE-----RIDLMRAVIIGLEG-T-PYCHGLFFFDIFFPTTYPVTPPLIFYHS 112 (283)
Q Consensus 41 ~~~~kRL~kEl~~L~~~~p~gi~v~~~e~-----~l~~w~~~I~Gp~~-T-PYegG~F~f~i~fP~~YP~~PP~v~F~t 112 (283)
.....+...|+..|+.--+..+.+..... ....+.+.|. |.+ . .-..-.+.+.|.||++||..||.|...+
T Consensus 9 ~~~~e~q~~EleaL~SIY~d~~~~~~~~~~~~~~~~~~~~i~l~-~~~~~~~~~~~~~~L~v~~p~~YP~~~P~i~l~~ 86 (137)
T 1ukx_A 9 ESYSQRQDHELQALEAIYGSDFQDLRPDARGRVREPPEINLVLY-PQGLAGEEVYVQVELRVKCPPTYPDVVPEIDLKN 86 (137)
T ss_dssp CCHHHHHHHHHHHHHHHTSSSEEECCCCCSSSCCCCCCEEEEEC-CTTSCSSSCSCEEEEEECCCTTTTSSCCCCEEEE
T ss_pred cchHHHHHHHHHHHHHHCcccceeccCcccCccCCCcEEEEEEe-cCCcCCcccceEEEEEEECCCCCCCCCCcEEEec
Confidence 34556778899999876655543321111 1344555554 222 1 0012468899999999999999998743
No 60
>3zqs_A E3 ubiquitin-protein ligase fancl; HET: P6G; 2.00A {Homo sapiens}
Probab=89.92 E-value=2.4 Score=36.38 Aligned_cols=85 Identities=12% Similarity=0.166 Sum_probs=60.0
Q ss_pred HHHHHHHHHHHhcCCCCceEEccCCCcccEEEEEEcCCCCccCCcEEEEEEEcCCCCCCCCCceeeecCcccCCCcccCC
Q 039638 45 ERIHKEWEILEKNLPSSIFVRASAERIDLMRAVIIGLEGTPYCHGLFFFDIFFPTTYPVTPPLIFYHSYGFDLNPNLHRD 124 (283)
Q Consensus 45 kRL~kEl~~L~~~~p~gi~v~~~e~~l~~w~~~I~Gp~~TPYegG~F~f~i~fP~~YP~~PP~v~F~t~i~r~HPNv~~~ 124 (283)
++|.+|+..|-=+ .+.-.+.++...+..+.... |....+.|.++.+||.+||.+.-.-|.- ++
T Consensus 4 ~~li~Ei~~iGW~-----~l~~id~~~~~i~l~~~D~~-----gR~H~l~v~l~~~yp~~~P~~~~DlP~~-~~------ 66 (186)
T 3zqs_A 4 SSLIEEIGTLGWD-----KLVYADTCFSTIKLKAEDAS-----GREHLITLKLKAKYPAESPDYFVDFPVP-FC------ 66 (186)
T ss_dssp CSHHHHHHHHCGG-----GEEEECTTSSEEEEEEECTT-----SCEEEEEEECCTTTTTSCCEEECCCSSC-CC------
T ss_pred HHHHHHHHHhCCc-----eeeeecCCccEEEEEEEeCC-----CCeEEEEEEECCCCCCCCCeeEEcCCCC-cc------
Confidence 3688888888221 12222456777888888443 6788999999999999999887765541 11
Q ss_pred CceeeecccccccCCccCCCCCCCccCCcccCcccHHHHHHHHHHhhhc
Q 039638 125 GQVSLDLLTINVSHSWWNCKRDSDEKQQWNPQESNIMQVLVSIQHKVLN 173 (283)
Q Consensus 125 G~VCLslL~~~t~~~w~~~~~~g~~~e~WsP~~~ti~~VL~sIq~Ll~~ 173 (283)
-.|+|. ++|..|+...+..|..
T Consensus 67 --------------------------~~w~~~-ssL~~v~~qF~~~Le~ 88 (186)
T 3zqs_A 67 --------------------------ASWTPQ-SSLISIYSQFLAAIES 88 (186)
T ss_dssp --------------------------CCCCTT-CCHHHHHHHHHHHHHH
T ss_pred --------------------------cccCCC-ccHHHHHHHHHHHHHH
Confidence 357787 7899888887777654
No 61
>2ebk_A RWD domain-containing protein 3; alpha+beta sandwich fold, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=87.75 E-value=1.2 Score=35.02 Aligned_cols=66 Identities=17% Similarity=0.076 Sum_probs=40.2
Q ss_pred HHHHHHHHHHhcCCC--CceEE-ccCCCcccEEEEEEcCCCCccCCcEEEEEEEcCCCCCCCCCceeeec
Q 039638 46 RIHKEWEILEKNLPS--SIFVR-ASAERIDLMRAVIIGLEGTPYCHGLFFFDIFFPTTYPVTPPLIFYHS 112 (283)
Q Consensus 46 RL~kEl~~L~~~~p~--gi~v~-~~e~~l~~w~~~I~Gp~~TPYegG~F~f~i~fP~~YP~~PP~v~F~t 112 (283)
....|+..|+.--+. .+.+. ....+...+.+.|....+. =..-.+.+.|.+|.+||..||.|...+
T Consensus 11 ~q~~EleaL~SIy~d~~e~~~~~~~~~~~~~f~i~l~~~~~~-~~~~~~~L~~~~p~~YP~~~P~i~l~~ 79 (128)
T 2ebk_A 11 PVQEELSVLAAIFCRPHEWEVLSRSETDGTVFRIHTKAEGFM-DADIPLELVFHLPVNYPSCLPGISINS 79 (128)
T ss_dssp HHHHHHHHHHHHHCCTTTCCCSEECSSSCEEEEEEEECCTTT-TCCCEEEEEEEECSSTTSSCCCCCCCC
T ss_pred HHHHHHHHHHHHcCCCCceEEecCCCCCCCeEEEEecCCCCC-CCCeEEEEEEECCCCCCCCCCeEEEEh
Confidence 466788888765432 33321 1112234666666532211 012368899999999999999987664
No 62
>2daw_A RWD domain containing protein 2; alpha+beta sandwich fold, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: d.20.1.3
Probab=85.68 E-value=2.3 Score=34.91 Aligned_cols=70 Identities=17% Similarity=0.118 Sum_probs=42.7
Q ss_pred chHHHHHHHHHHHHHHhcCC--CCceEEcc-------------CCC-c--ccEEEEEEcCCCCccCCcEEEEEEEcCCCC
Q 039638 40 KSELAERIHKEWEILEKNLP--SSIFVRAS-------------AER-I--DLMRAVIIGLEGTPYCHGLFFFDIFFPTTY 101 (283)
Q Consensus 40 ~~~~~kRL~kEl~~L~~~~p--~gi~v~~~-------------e~~-l--~~w~~~I~Gp~~TPYegG~F~f~i~fP~~Y 101 (283)
......+-..|+..|..--| ..+.+.-. ..+ . ..+++.|.-. + + ...+.+.|.+|.+|
T Consensus 12 ~~~~~e~Q~eElEaL~SIY~~~de~~v~d~~~~~~l~~~~~~~~~~~p~~~~~~i~l~~~-~-~--~~~i~L~v~lP~~Y 87 (154)
T 2daw_A 12 VKESLQLQLLEMEMLFSMFPNQGEVKLEDVNALTNIKRYLEGTREALPPKIEFVITLQIE-E-P--KVKIDLQVTMPHSY 87 (154)
T ss_dssp HHHHHHHHHHHHHHHHHHCCSTTSEEESCGGGTHHHHHHHHTSCCSCCCCEEEEEEEEET-T-T--TEEEEEEEEECSST
T ss_pred hhhhHHHHHHHHHHHHHhCCCCCeEEEeccchHHHHHHhhcccccCCCCceEEEEEEecC-C-C--CceEEEEEEcCCCC
Confidence 44556667778888886555 44443210 001 1 2344433322 1 1 23789999999999
Q ss_pred CCCCCceeeecC
Q 039638 102 PVTPPLIFYHSY 113 (283)
Q Consensus 102 P~~PP~v~F~t~ 113 (283)
|..||.|...+.
T Consensus 88 P~~~P~i~l~~~ 99 (154)
T 2daw_A 88 PYLALQLFGRSS 99 (154)
T ss_dssp TSSCCEEEEECS
T ss_pred CCCCCcEEEEeC
Confidence 999999987754
No 63
>2dax_A Protein C21ORF6; RWD domain, alpha+beta sandwich fold, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: d.20.1.3
Probab=81.55 E-value=0.94 Score=36.95 Aligned_cols=24 Identities=29% Similarity=0.508 Sum_probs=21.2
Q ss_pred EEEEEEEcCCCCCCCCCceeeecC
Q 039638 90 LFFFDIFFPTTYPVTPPLIFYHSY 113 (283)
Q Consensus 90 ~F~f~i~fP~~YP~~PP~v~F~t~ 113 (283)
.+.+.|.+|.+||..||.|...+.
T Consensus 74 ~l~L~v~lP~~YP~~~P~i~l~~~ 97 (152)
T 2dax_A 74 MFSLACILPFKYPAVLPEITVRSV 97 (152)
T ss_dssp EEEEEEEECSSTTSSCCCCEEECT
T ss_pred eEEEEEECCCCCCCCCCeEEEEcc
Confidence 578999999999999999987764
No 64
>3c7l_A Regulator of G-protein signaling 16; RGS, RGS16, GAP, GTPase activating protein, heterotrimeric G-protein, lipoprotein, palmitate, phosphoprotein; 1.89A {Mus musculus} PDB: 3c7k_B* 2ik8_B*
Probab=40.34 E-value=40 Score=26.24 Aligned_cols=58 Identities=7% Similarity=0.057 Sum_probs=39.2
Q ss_pred chHHHHHHhhhhcCHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHhcCccccccchH
Q 039638 214 MQFKHLVQGHFRNRAHQILQIHKAEMKPDDDEEMNQLFIKLLNAFEDNGAYCGHYYPK 271 (283)
Q Consensus 214 ~~fe~~v~~hf~~~~~~il~~~~~~~~~~~~~~~~~~~~~l~~~f~~~~~~~~~~~~~ 271 (283)
..|.+.++..|....-.....|+.|........+......++..|-..|+.++--++.
T Consensus 33 ~~F~~Fl~~e~s~Enl~Fw~~ve~~k~~~~~~~~~~~a~~Iy~~yi~~~s~~evNi~~ 90 (137)
T 3c7l_A 33 AAFHAFLKTEFSEENLEFWLACEEFKKIRSATKLASRAHHIFDEYIRSEAPKEVNIDH 90 (137)
T ss_dssp HHHHHHHHTTTCHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHHHTSTTCTTCCCCCH
T ss_pred HHHHHHHHHhCCHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHCCCCCCccCCCCH
Confidence 5677777776666666677778888776655566777777778887777754433443
No 65
>2oj4_A RGS3, regulator of G-protein signaling 3, RGP3; RGS domain, signaling protein inhibitor; 2.30A {Homo sapiens}
Probab=39.25 E-value=29 Score=26.39 Aligned_cols=65 Identities=11% Similarity=0.038 Sum_probs=48.6
Q ss_pred CCCCcchHHHHHHhhhhcCHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHhcCccccccchHHH
Q 039638 209 FKQPHMQFKHLVQGHFRNRAHQILQIHKAEMKPDDDEEMNQLFIKLLNAFEDNGAYCGHYYPKAL 273 (283)
Q Consensus 209 ~pp~~~~fe~~v~~hf~~~~~~il~~~~~~~~~~~~~~~~~~~~~l~~~f~~~~~~~~~~~~~~~ 273 (283)
+|-....|.+.++..+....-.....|+.|......+.+......++..|-..|+.++--++...
T Consensus 17 ~~~g~~~F~~Fl~~e~~~enl~Fw~~ve~~k~~~~~~~~~~~a~~I~~~yi~~~s~~evni~~~~ 81 (127)
T 2oj4_A 17 HKYGLAVFQAFLRTEFSEENLEFWLACEDFKKVKSQSKMASKAKKIFAEYIAIQACKEVNLDSYT 81 (127)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHHHTSTTCTTCCCCCHHH
T ss_pred CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHccCCCCcCccCCHHH
Confidence 55444678888888887777778889999988766667788888899999888886544444433
No 66
>3u3c_B Paxillin LD2 peptide; 4-helix bundle, focal adhesion, tyrosine kinase, transferase-signaling protein complex; 3.70A {Homo sapiens}
Probab=35.34 E-value=31 Score=19.67 Aligned_cols=21 Identities=24% Similarity=0.319 Sum_probs=18.1
Q ss_pred HHHHHHHHHHHHHHhcCCCCc
Q 039638 42 ELAERIHKEWEILEKNLPSSI 62 (283)
Q Consensus 42 ~~~kRL~kEl~~L~~~~p~gi 62 (283)
+-+.||.-|+...+.+||+|.
T Consensus 5 seldrlllelnavqhnppsg~ 25 (26)
T 3u3c_B 5 SELDRLLLELNAVQHNPPSGX 25 (26)
T ss_pred HHHHHHHHHHhhhccCCCCCC
Confidence 457899999999999999875
No 67
>2k19_A Putative piscicolin 126 immunity protein; PISI, bacteriocin, immune system, antimicrobial protein; NMR {Carnobacterium maltaromaticum}
Probab=31.14 E-value=1.7e+02 Score=22.27 Aligned_cols=37 Identities=32% Similarity=0.491 Sum_probs=34.0
Q ss_pred HHHHHHHHHHHHHhcCccccccchHHHhhhcccccCC
Q 039638 247 MNQLFIKLLNAFEDNGAYCGHYYPKALKERRSISNHR 283 (283)
Q Consensus 247 ~~~~~~~l~~~f~~~~~~~~~~~~~~~~~~~~~~~~~ 283 (283)
+.+|--.+.+.+.++++......++.+|+=|++||-|
T Consensus 59 LSRMNldiS~vl~~n~i~Ls~~qs~~lK~Lr~Ls~IR 95 (98)
T 2k19_A 59 LSRMNLDISKAIRNDGVTLSDYQSKKLKELTSISNIR 95 (98)
T ss_dssp HHHHHHHHHHHHHHHTCCCCHHHHHHHHHHHHHCSCC
T ss_pred HHHhhHHHHHHHHHCCcccCHHHHHHHHHHHHHHhhh
Confidence 6788889999999999999999999999999999876
No 68
>2ihd_A RGS8, regulator of G-protein signaling 8; signaling protein, structural genomics, structura genomics consortium, SGC, signaling protein; 1.70A {Homo sapiens} PDB: 2ode_B* 2bt2_A
Probab=30.51 E-value=46 Score=26.60 Aligned_cols=64 Identities=11% Similarity=0.067 Sum_probs=47.4
Q ss_pred CCCCcchHHHHHHhhhhcCHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHhcCccccccchHH
Q 039638 209 FKQPHMQFKHLVQGHFRNRAHQILQIHKAEMKPDDDEEMNQLFIKLLNAFEDNGAYCGHYYPKA 272 (283)
Q Consensus 209 ~pp~~~~fe~~v~~hf~~~~~~il~~~~~~~~~~~~~~~~~~~~~l~~~f~~~~~~~~~~~~~~ 272 (283)
+|-....|.+.++..+....-....+|+.|........+......+++.|-..|+.++--++..
T Consensus 45 dp~g~~~F~~FL~~e~s~Enl~Fw~~ve~yk~~~~~~~~~~~a~~Iy~~yi~~~s~~evNI~~~ 108 (155)
T 2ihd_A 45 HKYGVAAFRAFLKTEFSEENLEFWLACEEFKKTRSTAKLVSKAHRIFEEFVDVQAPREVNIDFQ 108 (155)
T ss_dssp SHHHHHHHHHHHHHTTCTHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHHHTSTTCTTCCCCCHH
T ss_pred CHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHCcCCCccccCCCHH
Confidence 4433367888888888877777888999998877666778888888899888888654434443
No 69
>2dlv_A RGS18, regulator of G-protein signaling 18; RGS domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=30.28 E-value=36 Score=26.43 Aligned_cols=64 Identities=8% Similarity=0.044 Sum_probs=44.9
Q ss_pred CCCCcchHHHHHHhhhhcCHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHhcCccccccchHH
Q 039638 209 FKQPHMQFKHLVQGHFRNRAHQILQIHKAEMKPDDDEEMNQLFIKLLNAFEDNGAYCGHYYPKA 272 (283)
Q Consensus 209 ~pp~~~~fe~~v~~hf~~~~~~il~~~~~~~~~~~~~~~~~~~~~l~~~f~~~~~~~~~~~~~~ 272 (283)
+|-....|.+.++..+....-.....|+.|........+......+++.|-..|+.++--++..
T Consensus 25 ~~~~~~~F~~Fl~~e~s~enl~Fw~~ve~~k~~~~~~~~~~~a~~Iy~~yi~~~s~~evni~~~ 88 (140)
T 2dlv_A 25 HRDGLEAFTRFLKTEFSEENIEFWIACEDFKKSKGPQQIHLKAKAIYEKFIQTDAPKEVNLDFH 88 (140)
T ss_dssp SHHHHHHHHHHHHHTTCTHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHTTSSSSTTCCCCCHH
T ss_pred ChHHHHHHHHHHHHhCCHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHCCCCCccccCCcHH
Confidence 4433367888888888777777788888888776445677778888888888887654434443
No 70
>2af0_A Regulator of G-protein signaling 2; helix, structural genomics, structural genomics consortium, SGC, signaling protein; 2.30A {Homo sapiens} PDB: 2v4z_B*
Probab=29.70 E-value=43 Score=26.28 Aligned_cols=64 Identities=11% Similarity=0.059 Sum_probs=46.5
Q ss_pred CCCCcchHHHHHHhhhhcCHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHhcCccccccchHH
Q 039638 209 FKQPHMQFKHLVQGHFRNRAHQILQIHKAEMKPDDDEEMNQLFIKLLNAFEDNGAYCGHYYPKA 272 (283)
Q Consensus 209 ~pp~~~~fe~~v~~hf~~~~~~il~~~~~~~~~~~~~~~~~~~~~l~~~f~~~~~~~~~~~~~~ 272 (283)
+|-....|.+.++..+....-.....|+.|........+......++..|-..|+.++--++..
T Consensus 33 ~p~g~~~F~~Fl~~e~s~Enl~Fw~~ve~~k~~~~~~~~~~~a~~Iy~~yi~~~s~~evNi~~~ 96 (146)
T 2af0_A 33 SKYGLAAFRAFLKSEFCEENIEFWLACEDFKKTKSPQKLSSKARKIYTDFIEKEAPKEINIDFQ 96 (146)
T ss_dssp SHHHHHHHHHHHHHTTCTHHHHHHHHHHHHHTCCCHHHHHHHHHHHHHHHTSTTCTTCCCCCHH
T ss_pred CHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHCcCCCCcccCcCHH
Confidence 4333367888888888777777888888888876666778888888888888887654434443
No 71
>1cmz_A Protein (GAIP (G-alpha interacting) protein); RGS, regulator of G protein, signaling protein regulation; NMR {Homo sapiens} SCOP: a.91.1.1
Probab=28.31 E-value=42 Score=26.55 Aligned_cols=63 Identities=2% Similarity=-0.053 Sum_probs=45.3
Q ss_pred CCCCcchHHHHHHhhhhcCHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHhcCccccccchH
Q 039638 209 FKQPHMQFKHLVQGHFRNRAHQILQIHKAEMKPDDDEEMNQLFIKLLNAFEDNGAYCGHYYPK 271 (283)
Q Consensus 209 ~pp~~~~fe~~v~~hf~~~~~~il~~~~~~~~~~~~~~~~~~~~~l~~~f~~~~~~~~~~~~~ 271 (283)
+|-....|.+.++..|....-.....|+.|......+.+......+++.|-..|+.++--++.
T Consensus 30 ~p~~~~~F~~Fl~~e~s~Enl~Fw~~ve~~k~~~~~~~~~~~a~~Iy~~yi~~~s~~evni~~ 92 (152)
T 1cmz_A 30 SPAGRSVFRAFLRTEYSEENMLFWLACEELKAEANQHVVDEKARLIYEDYVSILSPKEVSLDS 92 (152)
T ss_dssp SHHHHHHHHHHHHHHTCCHHHHHHHHHHHGGGTCCSHHHHHHHHHHHHHTTTCSSSCCCSCCS
T ss_pred ChHHHHHHHHHHHHhcChhhHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHcCCCCCceeeCCH
Confidence 443336788888888887777788888888877655667778888888888888755433433
No 72
>1dk8_A Axin; alpha-helix, PI-helix, signaling protein; HET: SO4; 1.57A {Homo sapiens} SCOP: a.91.1.1 PDB: 1emu_A
Probab=27.98 E-value=42 Score=26.30 Aligned_cols=53 Identities=11% Similarity=0.081 Sum_probs=28.0
Q ss_pred chHHHHHHhhhhcCHHHHHHHHHHhcCC----CChHHHHHHHHHHHHHHH-hcCcccc
Q 039638 214 MQFKHLVQGHFRNRAHQILQIHKAEMKP----DDDEEMNQLFIKLLNAFE-DNGAYCG 266 (283)
Q Consensus 214 ~~fe~~v~~hf~~~~~~il~~~~~~~~~----~~~~~~~~~~~~l~~~f~-~~~~~~~ 266 (283)
..|.+.++..+....-.....|+.|... ..++.+......+++.|- ..|+.|+
T Consensus 27 ~~F~~FL~~e~~~enl~Fw~~ve~~k~~~~~~~~~~~~~~~a~~Iy~~yi~~~~s~~~ 84 (147)
T 1dk8_A 27 SLFRTFLKQEGCADLLDFWFACTGFRKLEPCDSNEEKRLKLARAIYRKYILDNNGIVS 84 (147)
T ss_dssp HHHHHHHHTTTCHHHHHHHHHHHHHHHCCCCTTSHHHHHHHHHHHHHHHTSCTTSHHH
T ss_pred HHHHHHHHHccCHHHHHHHHHHHHHHhhhcccCCHHHHHHHHHHHHHHHhCCccCCCC
Confidence 4455555555554445555556655543 233345555556666665 5555443
No 73
>2jm5_A RGS18, regulator of G-protein signaling 18; signaling protein, structural genomics, structural genomics consortium, SGC; NMR {Homo sapiens} SCOP: a.91.1.1 PDB: 2owi_A
Probab=27.82 E-value=52 Score=26.03 Aligned_cols=64 Identities=8% Similarity=0.044 Sum_probs=48.5
Q ss_pred CCCCcchHHHHHHhhhhcCHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHhcCccccccchHH
Q 039638 209 FKQPHMQFKHLVQGHFRNRAHQILQIHKAEMKPDDDEEMNQLFIKLLNAFEDNGAYCGHYYPKA 272 (283)
Q Consensus 209 ~pp~~~~fe~~v~~hf~~~~~~il~~~~~~~~~~~~~~~~~~~~~l~~~f~~~~~~~~~~~~~~ 272 (283)
+|-....|.+.++..+....-.....|+.|........+......++..|-..|+.++--++..
T Consensus 21 ~p~g~~~F~~FL~~e~s~Enl~Fw~~ve~yk~~~~~~~~~~~a~~Iy~~yi~~~s~~evNi~~~ 84 (151)
T 2jm5_A 21 HRDGLEAFTRFLKTEFSEENIEFWIACEDFKKSKGPQQIHLKAKAIYEKFIQTDAPKEVNLDFH 84 (151)
T ss_dssp SHHHHHHHHHHHHHTTCTTTHHHHHHHHHHHTCCCHHHHHHHHHHHHHHTTCSSSSSCCCCCHH
T ss_pred ChHHHHHHHHHHHHhCCHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHccCcchhhcCCCHH
Confidence 5544467888888888888888889999998876656677888888888888888654444443
No 74
>1zv4_X RGS17, regulator of G-protein signaling 17; human RGSZ2, human RGS17(Z2), regulator of G-protein signali opioid receptor interacting protein; 2.40A {Homo sapiens}
Probab=27.38 E-value=47 Score=26.69 Aligned_cols=58 Identities=3% Similarity=-0.008 Sum_probs=39.2
Q ss_pred chHHHHHHhhhhcCHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHhcCccccccchH
Q 039638 214 MQFKHLVQGHFRNRAHQILQIHKAEMKPDDDEEMNQLFIKLLNAFEDNGAYCGHYYPK 271 (283)
Q Consensus 214 ~~fe~~v~~hf~~~~~~il~~~~~~~~~~~~~~~~~~~~~l~~~f~~~~~~~~~~~~~ 271 (283)
..|.+.++..|....-.....|+.|......+.+......+++.|-..|+.++--++.
T Consensus 48 ~~F~~FL~~e~s~Enl~Fw~~ve~yk~~~~~~~~~~~a~~Iy~~yi~~~s~~evNi~~ 105 (158)
T 1zv4_X 48 NLFREFLRTEYSEENLLFWLACEDLKKEQNKKVIEEKARMIYEDYISILSPKEVSLDS 105 (158)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHHCCSHHHHHHHHHHHHHHHTCCC-CCCCCCCH
T ss_pred HHHHHHHHHccCHhHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHCCCCCCceeecCH
Confidence 5677777777766666667778888776555667777778888888877754433444
No 75
>2crp_A RGS5, regulator of G-protein signaling 5; RGS domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=27.37 E-value=48 Score=26.17 Aligned_cols=64 Identities=11% Similarity=0.051 Sum_probs=45.9
Q ss_pred CCCCcchHHHHHHhhhhcCHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHhcCccccccchHH
Q 039638 209 FKQPHMQFKHLVQGHFRNRAHQILQIHKAEMKPDDDEEMNQLFIKLLNAFEDNGAYCGHYYPKA 272 (283)
Q Consensus 209 ~pp~~~~fe~~v~~hf~~~~~~il~~~~~~~~~~~~~~~~~~~~~l~~~f~~~~~~~~~~~~~~ 272 (283)
+|-....|.+.++..|....-.....|+.|......+.+......+++.|-..|+.++--++..
T Consensus 35 ~~~g~~~F~~Fl~~e~s~Enl~Fw~~ve~yk~~~~~~~~~~~a~~Iy~~yi~~~s~~evNi~~~ 98 (150)
T 2crp_A 35 NNYGLASFKSFLKSEFSEENLEFWIACEDYKKIKSPAKMAEKAKQIYEEFIQTEAPKEVNIDHF 98 (150)
T ss_dssp SHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTCCCTTHHHHHHHHHHHHTSSTTCSSCCSCCHH
T ss_pred CHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHccCCCCccCCCCHH
Confidence 5433467888888888776777788888888776555677778888888888887654444443
No 76
>2zrr_A Mundticin KS immunity protein; antiparallel four-helix bundle, antimicrobial protein; 1.80A {Enterococcus mundtii}
Probab=21.45 E-value=68 Score=25.38 Aligned_cols=37 Identities=35% Similarity=0.431 Sum_probs=31.8
Q ss_pred HHHHHHHHHHHHHhcCccccccchHHHhhhcccccCC
Q 039638 247 MNQLFIKLLNAFEDNGAYCGHYYPKALKERRSISNHR 283 (283)
Q Consensus 247 ~~~~~~~l~~~f~~~~~~~~~~~~~~~~~~~~~~~~~ 283 (283)
+.+|--.+.+.+.++++......++.+|+=|++||-|
T Consensus 79 LSRMNldIS~vL~~n~I~LS~~qs~~LK~Lr~LSnIR 115 (118)
T 2zrr_A 79 LSRMNIEISNAIKKDGVSLNENQSKKLKELMSISNIR 115 (118)
T ss_dssp HHHHHHHHHHHHTTTTCCCCHHHHHHHHHHHTTC---
T ss_pred HHHhhHHHHHHHHHCCcccCHHHHHHHHHHHHHHhhh
Confidence 6788889999999999999999999999999999865
No 77
>2bum_A Protocatechuate 3,4-dioxygenase alpha chain; oxidoreductase, aromatic degradation, non-heme iron, beta-SA mixed alpha/beta structure; 1.80A {Acinetobacter SP} SCOP: b.3.6.1 PDB: 1eo2_A 1eob_A* 1eoc_A* 1eoa_A 2buq_A 2bur_A* 2but_A 2buu_A* 2buv_A* 2buw_A* 1eo9_A 2bux_A 2buy_A 2buz_A* 2bv0_A*
Probab=20.10 E-value=75 Score=27.30 Aligned_cols=26 Identities=23% Similarity=0.346 Sum_probs=22.9
Q ss_pred CCcEEEEEEEcCCCCCC-----CCCceeeec
Q 039638 87 CHGLFFFDIFFPTTYPV-----TPPLIFYHS 112 (283)
Q Consensus 87 egG~F~f~i~fP~~YP~-----~PP~v~F~t 112 (283)
+.|.|.|.-.+|--||. .||.|+|.-
T Consensus 109 ~~G~y~F~TI~Pg~yp~~~G~~R~~HIH~~V 139 (209)
T 2bum_A 109 GTGFWSFNTIKPGAVPGRKGSTQAPHISLII 139 (209)
T ss_dssp TTCCEEEEEECCCCCBCSTTCBCCCCEEEEE
T ss_pred CCcEEEEEEEccCcccCCCCCccCcEEEEEE
Confidence 47899999999999998 899999874
Done!