Query 039643
Match_columns 520
No_of_seqs 335 out of 2225
Neff 7.9
Searched_HMMs 13730
Date Mon Mar 25 20:17:58 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/039643.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/039643hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d2astb2 c.10.1.3 (B:2136-2419) 99.3 6E-12 4.4E-16 122.6 11.8 175 123-311 43-235 (284)
2 d2astb2 c.10.1.3 (B:2136-2419) 99.2 3.6E-12 2.6E-16 124.3 3.2 191 98-304 46-252 (284)
3 d1h6ua2 c.10.2.1 (A:36-262) In 99.1 4.3E-10 3.1E-14 105.1 12.4 178 125-309 40-225 (227)
4 d2omza2 c.10.2.1 (A:33-416) In 99.0 3.8E-09 2.8E-13 105.3 16.0 177 194-395 196-381 (384)
5 d1h6ua2 c.10.2.1 (A:36-262) In 98.9 8E-09 5.8E-13 96.2 13.8 179 98-289 41-226 (227)
6 d2omxa2 c.10.2.1 (A:37-235) In 98.9 5.3E-09 3.9E-13 95.7 11.3 78 126-206 40-117 (199)
7 d1ogqa_ c.10.2.8 (A:) Polygala 98.8 5.4E-09 3.9E-13 102.1 11.3 209 99-312 51-279 (313)
8 d1h6ta2 c.10.2.1 (A:31-240) In 98.8 1E-08 7.5E-13 94.6 12.0 77 126-206 46-123 (210)
9 d2omxa2 c.10.2.1 (A:37-235) In 98.8 9.7E-09 7.1E-13 93.9 11.4 143 98-270 40-183 (199)
10 d2omza2 c.10.2.1 (A:33-416) In 98.8 2.2E-08 1.6E-12 99.6 14.8 186 120-311 191-383 (384)
11 d1h6ta2 c.10.2.1 (A:31-240) In 98.8 1.3E-08 9.5E-13 93.9 11.8 161 98-288 46-208 (210)
12 d1ozna_ c.10.2.7 (A:) Reticulo 98.7 1.7E-08 1.2E-12 97.3 10.0 193 116-312 24-236 (284)
13 d1xkua_ c.10.2.7 (A:) Decorin 98.7 3.1E-08 2.2E-12 96.1 11.1 86 116-205 23-110 (305)
14 d1ogqa_ c.10.2.8 (A:) Polygala 98.7 1.1E-08 8E-13 99.9 7.2 220 127-372 51-285 (313)
15 d1p9ag_ c.10.2.7 (G:) von Will 98.7 2E-08 1.5E-12 95.9 8.4 176 116-313 23-207 (266)
16 d1xkua_ c.10.2.7 (A:) Decorin 98.5 2.5E-07 1.8E-11 89.5 13.2 208 98-315 31-256 (305)
17 d1p9ag_ c.10.2.7 (G:) von Will 98.5 2.7E-08 1.9E-12 95.0 5.8 168 98-289 31-204 (266)
18 d1ozna_ c.10.2.7 (A:) Reticulo 98.3 5E-07 3.6E-11 86.6 7.2 185 98-289 32-234 (284)
19 d1xwdc1 c.10.2.7 (C:18-259) Fo 98.3 5.3E-07 3.8E-11 84.0 7.1 89 117-207 22-115 (242)
20 d2ca6a1 c.10.1.2 (A:2-345) Rna 98.2 9.5E-07 7E-11 86.9 8.2 230 85-314 17-315 (344)
21 d1a9na_ c.10.2.4 (A:) Spliceso 98.2 4.7E-07 3.4E-11 79.8 5.0 127 122-266 14-146 (162)
22 d2ca6a1 c.10.1.2 (A:2-345) Rna 98.2 4.7E-07 3.5E-11 89.2 5.1 197 116-314 21-256 (344)
23 d1dcea3 c.10.2.2 (A:444-567) R 98.2 4.8E-07 3.5E-11 76.0 4.4 119 130-264 2-122 (124)
24 d1m9la_ c.10.3.1 (A:) Outer ar 98.2 4.7E-08 3.4E-12 89.3 -2.4 146 100-265 25-180 (198)
25 d1a9na_ c.10.2.4 (A:) Spliceso 97.9 2.1E-06 1.5E-10 75.5 3.4 102 99-206 19-123 (162)
26 d1z7xw1 c.10.1.1 (W:1-460) Rib 97.9 2.2E-05 1.6E-09 78.6 11.4 343 89-445 17-453 (460)
27 d1xwdc1 c.10.2.7 (C:18-259) Fo 97.9 2.1E-05 1.5E-09 72.6 9.6 166 98-270 29-212 (242)
28 d1dcea3 c.10.2.2 (A:444-567) R 97.8 9.2E-06 6.7E-10 67.9 4.8 82 122-206 16-101 (124)
29 d1jl5a_ c.10.2.6 (A:) Leucine 97.7 7.5E-05 5.5E-09 71.9 11.6 74 98-184 58-131 (353)
30 d1w8aa_ c.10.2.7 (A:) Slit {Fr 97.6 1.1E-05 8.4E-10 72.3 3.5 115 115-247 20-139 (192)
31 d1w8aa_ c.10.2.7 (A:) Slit {Fr 97.6 2.9E-05 2.1E-09 69.5 5.7 126 128-271 10-138 (192)
32 d1jl5a_ c.10.2.6 (A:) Leucine 97.5 0.00048 3.5E-08 66.0 13.7 132 95-245 35-173 (353)
33 d1m9la_ c.10.3.1 (A:) Outer ar 97.2 3.3E-05 2.4E-09 69.8 0.8 122 128-270 25-151 (198)
34 d1z7xw1 c.10.1.1 (W:1-460) Rib 96.4 0.00031 2.2E-08 69.8 0.6 118 126-254 2-132 (460)
35 d2ifga3 c.10.2.7 (A:36-191) Hi 95.9 0.0026 1.9E-07 54.4 4.4 37 170-206 53-91 (156)
36 d2ifga3 c.10.2.7 (A:36-191) Hi 95.9 0.0026 1.9E-07 54.5 4.2 68 116-184 21-91 (156)
37 d1pgva_ c.10.1.1 (A:) Tropomod 95.4 0.0021 1.5E-07 55.7 1.6 96 163-269 5-110 (167)
38 d1pgva_ c.10.1.1 (A:) Tropomod 94.4 0.018 1.3E-06 49.4 4.9 112 147-269 14-141 (167)
39 d1io0a_ c.10.1.1 (A:) Tropomod 94.2 0.0082 6E-07 51.5 2.1 15 295-309 126-140 (166)
40 d1koha1 c.10.2.3 (A:201-362) m 93.3 0.0081 5.9E-07 51.5 0.3 57 125-183 64-125 (162)
41 d1io0a_ c.10.1.1 (A:) Tropomod 93.2 0.04 2.9E-06 46.8 4.9 114 146-270 15-143 (166)
42 d1koha1 c.10.2.3 (A:201-362) m 91.9 0.017 1.2E-06 49.4 0.5 13 295-307 140-152 (162)
43 d1fs1a1 a.158.1.1 (A:109-149) 40.6 2.7 0.0002 26.2 -0.0 20 6-25 17-36 (41)
44 d2ovrb1 a.158.1.1 (B:2263-2364 22.8 6 0.00044 29.5 -0.9 20 6-25 35-54 (102)
No 1
>d2astb2 c.10.1.3 (B:2136-2419) Cyclin A/CDK2-associated p19, Skp2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.28 E-value=6e-12 Score=122.63 Aligned_cols=175 Identities=21% Similarity=0.275 Sum_probs=113.6
Q ss_pred ccCCCccEEEEeccccCC---CcccCCCCCCCEEEecceecChHHHHHHHhcCCCcceeeeeccCCcceec----ccccc
Q 039643 123 YSAKLLTTLVLNGCRLDE---PLIAINLNSLKNLSLQRVYANEQMVHNLIAECCSLEDLSLRYTLGLKFFS----VSKAH 195 (520)
Q Consensus 123 ~~~~sL~~L~L~~c~l~~---p~~~~~l~sLk~L~L~~v~~~~~~l~~Lls~CP~LE~L~L~~c~~l~~l~----I~~~~ 195 (520)
+....|++|+|++|.+.. ...+..+++|++|+|.++.+++..+.. ++.||+|+.|++++|.++.... ..+++
T Consensus 43 ~~~~~L~~LdLs~~~i~~~~l~~l~~~c~~L~~L~L~~~~l~~~~~~~-l~~~~~L~~L~Ls~c~~itd~~l~~l~~~~~ 121 (284)
T d2astb2 43 FSPFRVQHMDLSNSVIEVSTLHGILSQCSKLQNLSLEGLRLSDPIVNT-LAKNSNLVRLNLSGCSGFSEFALQTLLSSCS 121 (284)
T ss_dssp CCCBCCCEEECTTCEECHHHHHHHHTTBCCCSEEECTTCBCCHHHHHH-HTTCTTCSEEECTTCBSCCHHHHHHHHHHCT
T ss_pred ccCCCCCEEECCCCccCHHHHHHHHHhCCCcccccccccCCCcHHHHH-HhcCCCCcCccccccccccccccchhhHHHH
Confidence 344578888888775532 233567788888888888776655554 4567888888888876654211 22367
Q ss_pred ccceEEEecccCCCCceeeeCCceeEEEecccccc-CCCCCcceEEeccc--ccchhHHHHHHhCCcccceeeccccccc
Q 039643 196 KLKNMVIVDYSRSSELESIVAPSLQQLTLVRVIVV-ATCPNLKKLHLSEI--VLEDQEFHELISKFPLLEDLSVSSSQPL 272 (520)
Q Consensus 196 ~Lk~L~I~~~~~~~~~~~i~aP~L~~L~l~~~~~~-~~l~~L~~L~L~~~--~~~~~~~~~ll~~l~~L~~L~L~~~~~l 272 (520)
+|++|++++|....+... ...+ ..+++|++++++++ .+++..+..+..++|+|+.|++++|..+
T Consensus 122 ~L~~L~ls~c~~~~~~~~-------------~~~~~~~~~~L~~L~l~~~~~~i~~~~l~~l~~~~~~L~~L~L~~~~~i 188 (284)
T d2astb2 122 RLDELNLSWCFDFTEKHV-------------QVAVAHVSETITQLNLSGYRKNLQKSDLSTLVRRCPNLVHLDLSDSVML 188 (284)
T ss_dssp TCCEEECCCCTTCCHHHH-------------HHHHHHSCTTCCEEECCSCGGGSCHHHHHHHHHHCTTCSEEECTTCTTC
T ss_pred hccccccccccccccccc-------------hhhhcccccccchhhhcccccccccccccccccccccccccccccccCC
Confidence 788888877753111000 0011 23567888888753 4566667778888999999999888765
Q ss_pred cccc----cccccccEEEeecCCchh----HHhcCCCCccEeEeccc
Q 039643 273 ERVK----FSSNLLKRVAFLFCRSLR----AVDLDTPNLLSFTFESV 311 (520)
Q Consensus 273 ~~~~----~~f~~L~~L~L~~c~~l~----~lL~~~P~L~~L~l~~~ 311 (520)
...+ ..+++|++|.+++|.++. ..+..+|+|+.|++.++
T Consensus 189 td~~~~~l~~~~~L~~L~L~~C~~i~~~~l~~L~~~~~L~~L~l~~~ 235 (284)
T d2astb2 189 KNDCFQEFFQLNYLQHLSLSRCYDIIPETLLELGEIPTLKTLQVFGI 235 (284)
T ss_dssp CGGGGGGGGGCTTCCEEECTTCTTCCGGGGGGGGGCTTCCEEECTTS
T ss_pred CchhhhhhcccCcCCEEECCCCCCCChHHHHHHhcCCCCCEEeeeCC
Confidence 3222 235689999998887643 34567899999988765
No 2
>d2astb2 c.10.1.3 (B:2136-2419) Cyclin A/CDK2-associated p19, Skp2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.16 E-value=3.6e-12 Score=124.29 Aligned_cols=191 Identities=21% Similarity=0.296 Sum_probs=129.1
Q ss_pred CCceEEEEEecCCCCCcccccCcccccCCCccEEEEeccccCC--CcccCCCCCCCEEEeccee-cChHHHHHHHhcCCC
Q 039643 98 NGVKELHIVVESSPHESAYTLPQAIYSAKLLTTLVLNGCRLDE--PLIAINLNSLKNLSLQRVY-ANEQMVHNLIAECCS 174 (520)
Q Consensus 98 ~~VkeL~L~~~~~~~~~~~~LP~~l~~~~sL~~L~L~~c~l~~--p~~~~~l~sLk~L~L~~v~-~~~~~l~~Lls~CP~ 174 (520)
.++++|++.... ...-.++..+..|++|++|.|++|.+.. +.....+++|++|+|++|. +++..+..+..+||.
T Consensus 46 ~~L~~LdLs~~~---i~~~~l~~l~~~c~~L~~L~L~~~~l~~~~~~~l~~~~~L~~L~Ls~c~~itd~~l~~l~~~~~~ 122 (284)
T d2astb2 46 FRVQHMDLSNSV---IEVSTLHGILSQCSKLQNLSLEGLRLSDPIVNTLAKNSNLVRLNLSGCSGFSEFALQTLLSSCSR 122 (284)
T ss_dssp BCCCEEECTTCE---ECHHHHHHHHTTBCCCSEEECTTCBCCHHHHHHHTTCTTCSEEECTTCBSCCHHHHHHHHHHCTT
T ss_pred CCCCEEECCCCc---cCHHHHHHHHHhCCCcccccccccCCCcHHHHHHhcCCCCcCccccccccccccccchhhHHHHh
Confidence 368888875421 1122344456678999999999997643 4456789999999999985 488899999999999
Q ss_pred cceeeeeccCCcceec----c-ccccccceEEEecccCCCCceeeeCCceeEEEeccccccCCCCCcceEEeccc-ccch
Q 039643 175 LEDLSLRYTLGLKFFS----V-SKAHKLKNMVIVDYSRSSELESIVAPSLQQLTLVRVIVVATCPNLKKLHLSEI-VLED 248 (520)
Q Consensus 175 LE~L~L~~c~~l~~l~----I-~~~~~Lk~L~I~~~~~~~~~~~i~aP~L~~L~l~~~~~~~~l~~L~~L~L~~~-~~~~ 248 (520)
|++|++++|..+..-. + ..+++|++|.+.++........ +. .-+.++|+|++|+++++ .+++
T Consensus 123 L~~L~ls~c~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~i~~~~-----l~-------~l~~~~~~L~~L~L~~~~~itd 190 (284)
T d2astb2 123 LDELNLSWCFDFTEKHVQVAVAHVSETITQLNLSGYRKNLQKSD-----LS-------TLVRRCPNLVHLDLSDSVMLKN 190 (284)
T ss_dssp CCEEECCCCTTCCHHHHHHHHHHSCTTCCEEECCSCGGGSCHHH-----HH-------HHHHHCTTCSEEECTTCTTCCG
T ss_pred ccccccccccccccccchhhhcccccccchhhhccccccccccc-----cc-------ccccccccccccccccccCCCc
Confidence 9999999997653211 1 1257899999988752111000 00 01245778888888764 4555
Q ss_pred hHHHHHHhCCcccceeeccccccccccc----cccccccEEEeecCCc---hhHHhcCCCCcc
Q 039643 249 QEFHELISKFPLLEDLSVSSSQPLERVK----FSSNLLKRVAFLFCRS---LRAVDLDTPNLL 304 (520)
Q Consensus 249 ~~~~~ll~~l~~L~~L~L~~~~~l~~~~----~~f~~L~~L~L~~c~~---l~~lL~~~P~L~ 304 (520)
..+ ..+.++++|++|.|++|..+.+.+ ...++|+.|++.+|-. +..+...+|+|+
T Consensus 191 ~~~-~~l~~~~~L~~L~L~~C~~i~~~~l~~L~~~~~L~~L~l~~~~~d~~l~~l~~~lp~L~ 252 (284)
T d2astb2 191 DCF-QEFFQLNYLQHLSLSRCYDIIPETLLELGEIPTLKTLQVFGIVPDGTLQLLKEALPHLQ 252 (284)
T ss_dssp GGG-GGGGGCTTCCEEECTTCTTCCGGGGGGGGGCTTCCEEECTTSSCTTCHHHHHHHSTTSE
T ss_pred hhh-hhhcccCcCCEEECCCCCCCChHHHHHHhcCCCCCEEeeeCCCCHHHHHHHHHhCcccc
Confidence 433 345678999999999887653222 2357899999988732 235556788875
No 3
>d1h6ua2 c.10.2.1 (A:36-262) Internalin H {Listeria monocytogenes [TaxId: 1639]}
Probab=99.06 E-value=4.3e-10 Score=105.13 Aligned_cols=178 Identities=17% Similarity=0.115 Sum_probs=100.2
Q ss_pred CCCccEEEEeccccCCCcccCCCCCCCEEEecceecChHHHHHHHhcCCCcceeeeeccCCcceeccccccccceEEEec
Q 039643 125 AKLLTTLVLNGCRLDEPLIAINLNSLKNLSLQRVYANEQMVHNLIAECCSLEDLSLRYTLGLKFFSVSKAHKLKNMVIVD 204 (520)
Q Consensus 125 ~~sL~~L~L~~c~l~~p~~~~~l~sLk~L~L~~v~~~~~~l~~Lls~CP~LE~L~L~~c~~l~~l~I~~~~~Lk~L~I~~ 204 (520)
+.+|+.|.+.+|.+...+....+++|++|+|+++.+.+-. -+..++.|+.|.+.++..-..-.+.++++|+.+.+.+
T Consensus 40 l~~L~~L~l~~~~i~~l~~l~~l~~L~~L~ls~n~i~~~~---~l~~l~~l~~l~~~~n~~~~i~~l~~l~~L~~l~l~~ 116 (227)
T d1h6ua2 40 LDGITTLSAFGTGVTTIEGVQYLNNLIGLELKDNQITDLA---PLKNLTKITELELSGNPLKNVSAIAGLQSIKTLDLTS 116 (227)
T ss_dssp HHTCCEEECTTSCCCCCTTGGGCTTCCEEECCSSCCCCCG---GGTTCCSCCEEECCSCCCSCCGGGTTCTTCCEEECTT
T ss_pred cCCcCEEECCCCCCCcchhHhcCCCCcEeecCCceeeccc---ccccccccccccccccccccccccccccccccccccc
Confidence 4566666666665533234556677777777666652211 0456667777766665421111234466666666666
Q ss_pred ccCCCCceeeeCCceeEEEecc-----ccccCCCCCcceEEecccccchhHHHHHHhCCcccceeeccccccccccc--c
Q 039643 205 YSRSSELESIVAPSLQQLTLVR-----VIVVATCPNLKKLHLSEIVLEDQEFHELISKFPLLEDLSVSSSQPLERVK--F 277 (520)
Q Consensus 205 ~~~~~~~~~i~aP~L~~L~l~~-----~~~~~~l~~L~~L~L~~~~~~~~~~~~ll~~l~~L~~L~L~~~~~l~~~~--~ 277 (520)
+...........+.++.+.+.. ...+..+++|+++.+.++.+++. .-++++++|+.|+++++. +..+. .
T Consensus 117 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~L~~L~l~~n~~~~~---~~l~~l~~L~~L~Ls~n~-l~~l~~l~ 192 (227)
T d1h6ua2 117 TQITDVTPLAGLSNLQVLYLDLNQITNISPLAGLTNLQYLSIGNAQVSDL---TPLANLSKLTTLKADDNK-ISDISPLA 192 (227)
T ss_dssp SCCCCCGGGTTCTTCCEEECCSSCCCCCGGGGGCTTCCEEECCSSCCCCC---GGGTTCTTCCEEECCSSC-CCCCGGGG
T ss_pred ccccccchhccccchhhhhchhhhhchhhhhccccccccccccccccccc---hhhcccccceecccCCCc-cCCChhhc
Confidence 5431111112344555555431 22356677788888777665432 125677888888887764 22221 2
Q ss_pred ccccccEEEeecCCchh-HHhcCCCCccEeEec
Q 039643 278 SSNLLKRVAFLFCRSLR-AVDLDTPNLLSFTFE 309 (520)
Q Consensus 278 ~f~~L~~L~L~~c~~l~-~lL~~~P~L~~L~l~ 309 (520)
.+++|++|+|++|.-.. ..+.++|+|+.|+++
T Consensus 193 ~l~~L~~L~Ls~N~lt~i~~l~~l~~L~~L~ls 225 (227)
T d1h6ua2 193 SLPNLIEVHLKNNQISDVSPLANTSNLFIVTLT 225 (227)
T ss_dssp GCTTCCEEECTTSCCCBCGGGTTCTTCCEEEEE
T ss_pred CCCCCCEEECcCCcCCCCcccccCCCCCEEEee
Confidence 35678888887753211 346788888888875
No 4
>d2omza2 c.10.2.1 (A:33-416) Internalin A {Listeria monocytogenes [TaxId: 1639]}
Probab=98.97 E-value=3.8e-09 Score=105.33 Aligned_cols=177 Identities=16% Similarity=0.124 Sum_probs=105.8
Q ss_pred ccccceEEEecccCCCCceeeeCCceeEEEecc-----ccccCCCCCcceEEecccccchhHHHHHHhCCcccceeeccc
Q 039643 194 AHKLKNMVIVDYSRSSELESIVAPSLQQLTLVR-----VIVVATCPNLKKLHLSEIVLEDQEFHELISKFPLLEDLSVSS 268 (520)
Q Consensus 194 ~~~Lk~L~I~~~~~~~~~~~i~aP~L~~L~l~~-----~~~~~~l~~L~~L~L~~~~~~~~~~~~ll~~l~~L~~L~L~~ 268 (520)
+++++.+.+.++....-......++|+.|.+.+ ...+..+++|+.+++..+.+++.. -++.+++|+.|.+++
T Consensus 196 l~~~~~l~l~~n~i~~~~~~~~~~~L~~L~l~~n~l~~~~~l~~l~~L~~L~l~~n~l~~~~---~~~~~~~L~~L~l~~ 272 (384)
T d2omza2 196 LTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQISNLA---PLSGLTKLTELKLGA 272 (384)
T ss_dssp CTTCSEEECCSSCCCCCGGGGGCTTCCEEECCSSCCCCCGGGGGCTTCSEEECCSSCCCCCG---GGTTCTTCSEEECCS
T ss_pred ccccceeeccCCccCCCCcccccCCCCEEECCCCCCCCcchhhcccccchhccccCccCCCC---cccccccCCEeeccC
Confidence 467777777766532111123467899998862 234577889999999887776521 267889999999987
Q ss_pred ccccc-ccccccccccEEEeecCCchh-HHhcCCCCccEeEecccCCCCcccccccCC-CcE-EEEeccccccChhhHHH
Q 039643 269 SQPLE-RVKFSSNLLKRVAFLFCRSLR-AVDLDTPNLLSFTFESVRIPTISISASHQC-PWN-VFFVHEHDVGDIDNWYL 344 (520)
Q Consensus 269 ~~~l~-~~~~~f~~L~~L~L~~c~~l~-~lL~~~P~L~~L~l~~~~~~~~~~~~l~~~-~L~-v~~~~~~~~g~~~~l~~ 344 (520)
+.... +.......++.+.+..+.... ..+..+++++.|+++++.+..+ ..+... .++ +.+..+.+++-
T Consensus 273 ~~l~~~~~~~~~~~l~~l~~~~n~l~~~~~~~~~~~l~~L~ls~n~l~~l--~~l~~l~~L~~L~L~~n~l~~l------ 344 (384)
T d2omza2 273 NQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYLTLYFNNISDI--SPVSSLTKLQRLFFANNKVSDV------ 344 (384)
T ss_dssp SCCCCCGGGTTCTTCSEEECCSSCCSCCGGGGGCTTCSEEECCSSCCSCC--GGGGGCTTCCEEECCSSCCCCC------
T ss_pred cccCCCCccccccccccccccccccccccccchhcccCeEECCCCCCCCC--cccccCCCCCEEECCCCCCCCC------
Confidence 66321 111234567777766543222 3457778888888888876654 112222 244 44555554421
Q ss_pred HHHHHHhccccccceEEEeccccccccccccccccccCCCCcccccceEEE
Q 039643 345 KLKEFLGASNQIENLLINLRSVNIRQMPFDLEEFKNRSPSLPFQVGNMRLI 395 (520)
Q Consensus 345 ~~~~~l~n~~~Le~L~i~~~~~~~~~i~~~L~~~p~asp~l~~~l~~L~l~ 395 (520)
. .+.+++.|+.+.+.. +...+ ++ |. ..++ .|+.|.+.
T Consensus 345 --~-~l~~l~~L~~L~l~~-N~l~~-l~------~l--~~l~-~L~~L~L~ 381 (384)
T d2omza2 345 --S-SLANLTNINWLSAGH-NQISD-LT------PL--ANLT-RITQLGLN 381 (384)
T ss_dssp --G-GGGGCTTCCEEECCS-SCCCB-CG------GG--TTCT-TCSEEECC
T ss_pred --h-hHcCCCCCCEEECCC-CcCCC-Ch------hh--ccCC-CCCEeeCC
Confidence 2 256788999999874 33222 21 21 2345 77777764
No 5
>d1h6ua2 c.10.2.1 (A:36-262) Internalin H {Listeria monocytogenes [TaxId: 1639]}
Probab=98.88 E-value=8e-09 Score=96.22 Aligned_cols=179 Identities=17% Similarity=0.154 Sum_probs=130.9
Q ss_pred CCceEEEEEecCCCCCcccccCcccccCCCccEEEEeccccCCCcccCCCCCCCEEEecceecChHHHHHHHhcCCCcce
Q 039643 98 NGVKELHIVVESSPHESAYTLPQAIYSAKLLTTLVLNGCRLDEPLIAINLNSLKNLSLQRVYANEQMVHNLIAECCSLED 177 (520)
Q Consensus 98 ~~VkeL~L~~~~~~~~~~~~LP~~l~~~~sL~~L~L~~c~l~~p~~~~~l~sLk~L~L~~v~~~~~~l~~Lls~CP~LE~ 177 (520)
.++++|.+... ..-.++ .+..+++|++|+|++|.+.....+..+++|+.|.+.++.+.. +. -+.+++.|+.
T Consensus 41 ~~L~~L~l~~~-----~i~~l~-~l~~l~~L~~L~ls~n~i~~~~~l~~l~~l~~l~~~~n~~~~--i~-~l~~l~~L~~ 111 (227)
T d1h6ua2 41 DGITTLSAFGT-----GVTTIE-GVQYLNNLIGLELKDNQITDLAPLKNLTKITELELSGNPLKN--VS-AIAGLQSIKT 111 (227)
T ss_dssp HTCCEEECTTS-----CCCCCT-TGGGCTTCCEEECCSSCCCCCGGGTTCCSCCEEECCSCCCSC--CG-GGTTCTTCCE
T ss_pred CCcCEEECCCC-----CCCcch-hHhcCCCCcEeecCCceeeccccccccccccccccccccccc--cc-cccccccccc
Confidence 57888888653 123453 577899999999999977554558999999999999887732 11 1578999999
Q ss_pred eeeeccCCcceeccccccccceEEEecccCCCCceeeeCCceeEEEecc-----ccccCCCCCcceEEecccccchhHHH
Q 039643 178 LSLRYTLGLKFFSVSKAHKLKNMVIVDYSRSSELESIVAPSLQQLTLVR-----VIVVATCPNLKKLHLSEIVLEDQEFH 252 (520)
Q Consensus 178 L~L~~c~~l~~l~I~~~~~Lk~L~I~~~~~~~~~~~i~aP~L~~L~l~~-----~~~~~~l~~L~~L~L~~~~~~~~~~~ 252 (520)
|.+.++.......+...+.++.+.+..+...........++|++|.+.. ...+.++++|++++++++.+++-
T Consensus 112 l~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~L~~L~l~~n~~~~~~~l~~l~~L~~L~Ls~n~l~~l--- 188 (227)
T d1h6ua2 112 LDLTSTQITDVTPLAGLSNLQVLYLDLNQITNISPLAGLTNLQYLSIGNAQVSDLTPLANLSKLTTLKADDNKISDI--- 188 (227)
T ss_dssp EECTTSCCCCCGGGTTCTTCCEEECCSSCCCCCGGGGGCTTCCEEECCSSCCCCCGGGTTCTTCCEEECCSSCCCCC---
T ss_pred cccccccccccchhccccchhhhhchhhhhchhhhhccccccccccccccccccchhhcccccceecccCCCccCCC---
Confidence 9999886433333344788899998887643222235678999999863 34578899999999999887652
Q ss_pred HHHhCCcccceeeccccccccccc--cccccccEEEeec
Q 039643 253 ELISKFPLLEDLSVSSSQPLERVK--FSSNLLKRVAFLF 289 (520)
Q Consensus 253 ~ll~~l~~L~~L~L~~~~~l~~~~--~~f~~L~~L~L~~ 289 (520)
..++++++|+.|.|++|. +..+. ..+++|+.|++++
T Consensus 189 ~~l~~l~~L~~L~Ls~N~-lt~i~~l~~l~~L~~L~lsn 226 (227)
T d1h6ua2 189 SPLASLPNLIEVHLKNNQ-ISDVSPLANTSNLFIVTLTN 226 (227)
T ss_dssp GGGGGCTTCCEEECTTSC-CCBCGGGTTCTTCCEEEEEE
T ss_pred hhhcCCCCCCEEECcCCc-CCCCcccccCCCCCEEEeeC
Confidence 237899999999999986 43222 2467899998863
No 6
>d2omxa2 c.10.2.1 (A:37-235) Internalin B {Listeria monocytogenes [TaxId: 1639]}
Probab=98.86 E-value=5.3e-09 Score=95.67 Aligned_cols=78 Identities=12% Similarity=0.114 Sum_probs=32.7
Q ss_pred CCccEEEEeccccCCCcccCCCCCCCEEEecceecChHHHHHHHhcCCCcceeeeeccCCcceeccccccccceEEEecc
Q 039643 126 KLLTTLVLNGCRLDEPLIAINLNSLKNLSLQRVYANEQMVHNLIAECCSLEDLSLRYTLGLKFFSVSKAHKLKNMVIVDY 205 (520)
Q Consensus 126 ~sL~~L~L~~c~l~~p~~~~~l~sLk~L~L~~v~~~~~~l~~Lls~CP~LE~L~L~~c~~l~~l~I~~~~~Lk~L~I~~~ 205 (520)
++|++|.++++.+........+++|++|+|+++.+.+-. . ++++|.|+.|.+.++.....-.+.++++|+.|++.++
T Consensus 40 ~~l~~L~l~~~~i~~l~~l~~l~nL~~L~Ls~N~l~~~~--~-l~~l~~L~~L~l~~n~~~~~~~l~~l~~L~~L~l~~~ 116 (199)
T d2omxa2 40 DQVTTLQADRLGIKSIDGVEYLNNLTQINFSNNQLTDIT--P-LKNLTKLVDILMNNNQIADITPLANLTNLTGLTLFNN 116 (199)
T ss_dssp TTCCEEECTTSCCCCCTTGGGCTTCCEEECCSSCCCCCG--G-GTTCTTCCEEECCSSCCCCCGGGTTCTTCSEEECCSS
T ss_pred cCCCEEECCCCCCCCccccccCCCcCcCccccccccCcc--c-ccCCccccccccccccccccccccccccccccccccc
Confidence 344455555444322223344455555555554442100 0 3444555555555443211112333445555555444
Q ss_pred c
Q 039643 206 S 206 (520)
Q Consensus 206 ~ 206 (520)
.
T Consensus 117 ~ 117 (199)
T d2omxa2 117 Q 117 (199)
T ss_dssp C
T ss_pred c
Confidence 3
No 7
>d1ogqa_ c.10.2.8 (A:) Polygalacturonase inhibiting protein PGIP {Kidney bean (Phaseolus vulgaris) [TaxId: 3885]}
Probab=98.84 E-value=5.4e-09 Score=102.15 Aligned_cols=209 Identities=16% Similarity=0.099 Sum_probs=124.2
Q ss_pred CceEEEEEecCCCCCcccccCcccccCCCccEEEEecc-cc--CCCcccCCCCCCCEEEecceecChHHHHHHHhcCCCc
Q 039643 99 GVKELHIVVESSPHESAYTLPQAIYSAKLLTTLVLNGC-RL--DEPLIAINLNSLKNLSLQRVYANEQMVHNLIAECCSL 175 (520)
Q Consensus 99 ~VkeL~L~~~~~~~~~~~~LP~~l~~~~sL~~L~L~~c-~l--~~p~~~~~l~sLk~L~L~~v~~~~~~l~~Lls~CP~L 175 (520)
+|.+|+|.... ......+|..+..+++|++|+|++| .+ ..|+.+.++++|++|+|+++.+.. .....+..++.|
T Consensus 51 ~v~~L~L~~~~--l~g~~~lp~~l~~L~~L~~L~Ls~~N~l~g~iP~~i~~L~~L~~L~Ls~N~l~~-~~~~~~~~~~~L 127 (313)
T d1ogqa_ 51 RVNNLDLSGLN--LPKPYPIPSSLANLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSG-AIPDFLSQIKTL 127 (313)
T ss_dssp CEEEEEEECCC--CSSCEECCGGGGGCTTCSEEEEEEETTEESCCCGGGGGCTTCSEEEEEEECCEE-ECCGGGGGCTTC
T ss_pred EEEEEECCCCC--CCCCCCCChHHhcCccccccccccccccccccccccccccccchhhhccccccc-cccccccchhhh
Confidence 58889887652 2345679999999999999999974 55 458889999999999999998732 112235678999
Q ss_pred ceeeeeccCCcc--eeccccccccceEEEecccCC--CCceeeeCCce-eEEEecc-------ccccCCCCCcceEEecc
Q 039643 176 EDLSLRYTLGLK--FFSVSKAHKLKNMVIVDYSRS--SELESIVAPSL-QQLTLVR-------VIVVATCPNLKKLHLSE 243 (520)
Q Consensus 176 E~L~L~~c~~l~--~l~I~~~~~Lk~L~I~~~~~~--~~~~~i~aP~L-~~L~l~~-------~~~~~~l~~L~~L~L~~ 243 (520)
+.+++.++.... .-.+.++++|+.++++++... .+......+++ +.+.+.. +..+..+. +..+++..
T Consensus 128 ~~l~l~~N~~~~~~p~~l~~l~~L~~l~l~~n~l~~~ip~~~~~l~~l~~~l~~~~n~l~~~~~~~~~~l~-~~~l~l~~ 206 (313)
T d1ogqa_ 128 VTLDFSYNALSGTLPPSISSLPNLVGITFDGNRISGAIPDSYGSFSKLFTSMTISRNRLTGKIPPTFANLN-LAFVDLSR 206 (313)
T ss_dssp CEEECCSSEEESCCCGGGGGCTTCCEEECCSSCCEEECCGGGGCCCTTCCEEECCSSEEEEECCGGGGGCC-CSEEECCS
T ss_pred cccccccccccccCchhhccCcccceeeccccccccccccccccccccccccccccccccccccccccccc-cccccccc
Confidence 999999875322 234666899999999888641 11111122232 4444321 11222222 22344443
Q ss_pred cccchhHHHHHHhCCcccceeecccccccccc--ccccccccEEEeecCCchh---HHhcCCCCccEeEecccC
Q 039643 244 IVLEDQEFHELISKFPLLEDLSVSSSQPLERV--KFSSNLLKRVAFLFCRSLR---AVDLDTPNLLSFTFESVR 312 (520)
Q Consensus 244 ~~~~~~~~~~ll~~l~~L~~L~L~~~~~l~~~--~~~f~~L~~L~L~~c~~l~---~lL~~~P~L~~L~l~~~~ 312 (520)
+...+. +...+..+++++.|.+..+...... .....+|+.|+|+++.-.. ..+.++|+|+.|+++++.
T Consensus 207 ~~~~~~-~~~~~~~~~~l~~l~~~~~~l~~~~~~~~~~~~L~~L~Ls~N~l~g~iP~~l~~L~~L~~L~Ls~N~ 279 (313)
T d1ogqa_ 207 NMLEGD-ASVLFGSDKNTQKIHLAKNSLAFDLGKVGLSKNLNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNN 279 (313)
T ss_dssp SEEEEC-CGGGCCTTSCCSEEECCSSEECCBGGGCCCCTTCCEEECCSSCCEECCCGGGGGCTTCCEEECCSSE
T ss_pred cccccc-ccccccccccccccccccccccccccccccccccccccCccCeecccCChHHhCCCCCCEEECcCCc
Confidence 332221 2234556667777776665532111 1123466666666543221 344566666666666553
No 8
>d1h6ta2 c.10.2.1 (A:31-240) Internalin B {Listeria monocytogenes [TaxId: 1639]}
Probab=98.82 E-value=1e-08 Score=94.58 Aligned_cols=77 Identities=17% Similarity=0.147 Sum_probs=36.4
Q ss_pred CCccEEEEeccccCCCcccCCCCCCCEEEecceecChHHHHHHHhcCCCcceeeeeccCCccee-ccccccccceEEEec
Q 039643 126 KLLTTLVLNGCRLDEPLIAINLNSLKNLSLQRVYANEQMVHNLIAECCSLEDLSLRYTLGLKFF-SVSKAHKLKNMVIVD 204 (520)
Q Consensus 126 ~sL~~L~L~~c~l~~p~~~~~l~sLk~L~L~~v~~~~~~l~~Lls~CP~LE~L~L~~c~~l~~l-~I~~~~~Lk~L~I~~ 204 (520)
.+|++|.+++|.+........+++|++|+|+++.+++ +. -++.++.|+.|++.+|. ++.+ .+.++++|+.|++.+
T Consensus 46 ~~L~~L~l~~~~i~~l~~l~~l~~L~~L~L~~n~i~~--l~-~~~~l~~L~~L~l~~n~-i~~l~~l~~l~~L~~L~l~~ 121 (210)
T d1h6ta2 46 NSIDQIIANNSDIKSVQGIQYLPNVTKLFLNGNKLTD--IK-PLANLKNLGWLFLDENK-VKDLSSLKDLKKLKSLSLEH 121 (210)
T ss_dssp HTCCEEECTTSCCCCCTTGGGCTTCCEEECCSSCCCC--CG-GGTTCTTCCEEECCSSC-CCCGGGGTTCTTCCEEECTT
T ss_pred cCccEEECcCCCCCCchhHhhCCCCCEEeCCCccccC--cc-ccccCcccccccccccc-cccccccccccccccccccc
Confidence 4555555555544332334455556666555555421 11 12445555555555553 1111 133355555555555
Q ss_pred cc
Q 039643 205 YS 206 (520)
Q Consensus 205 ~~ 206 (520)
+.
T Consensus 122 ~~ 123 (210)
T d1h6ta2 122 NG 123 (210)
T ss_dssp SC
T ss_pred cc
Confidence 44
No 9
>d2omxa2 c.10.2.1 (A:37-235) Internalin B {Listeria monocytogenes [TaxId: 1639]}
Probab=98.81 E-value=9.7e-09 Score=93.86 Aligned_cols=143 Identities=16% Similarity=0.185 Sum_probs=98.8
Q ss_pred CCceEEEEEecCCCCCcccccCcccccCCCccEEEEeccccCCCcccCCCCCCCEEEecceecCh-HHHHHHHhcCCCcc
Q 039643 98 NGVKELHIVVESSPHESAYTLPQAIYSAKLLTTLVLNGCRLDEPLIAINLNSLKNLSLQRVYANE-QMVHNLIAECCSLE 176 (520)
Q Consensus 98 ~~VkeL~L~~~~~~~~~~~~LP~~l~~~~sL~~L~L~~c~l~~p~~~~~l~sLk~L~L~~v~~~~-~~l~~Lls~CP~LE 176 (520)
.++++|++.... ...++ .+..+++|++|+|++|.+...+.+.++++|++|++..+.+.. .. +++++.|+
T Consensus 40 ~~l~~L~l~~~~-----i~~l~-~l~~l~nL~~L~Ls~N~l~~~~~l~~l~~L~~L~l~~n~~~~~~~----l~~l~~L~ 109 (199)
T d2omxa2 40 DQVTTLQADRLG-----IKSID-GVEYLNNLTQINFSNNQLTDITPLKNLTKLVDILMNNNQIADITP----LANLTNLT 109 (199)
T ss_dssp TTCCEEECTTSC-----CCCCT-TGGGCTTCCEEECCSSCCCCCGGGTTCTTCCEEECCSSCCCCCGG----GTTCTTCS
T ss_pred cCCCEEECCCCC-----CCCcc-ccccCCCcCcCccccccccCcccccCCcccccccccccccccccc----cccccccc
Confidence 578888875531 22333 466789999999999988554558899999999999987732 22 67899999
Q ss_pred eeeeeccCCcceeccccccccceEEEecccCCCCceeeeCCceeEEEeccccccCCCCCcceEEecccccchhHHHHHHh
Q 039643 177 DLSLRYTLGLKFFSVSKAHKLKNMVIVDYSRSSELESIVAPSLQQLTLVRVIVVATCPNLKKLHLSEIVLEDQEFHELIS 256 (520)
Q Consensus 177 ~L~L~~c~~l~~l~I~~~~~Lk~L~I~~~~~~~~~~~i~aP~L~~L~l~~~~~~~~l~~L~~L~L~~~~~~~~~~~~ll~ 256 (520)
.|++.++.......+.++++|+.|+++++.... ...+..+++|+++++.++.+++- .-++
T Consensus 110 ~L~l~~~~~~~~~~~~~l~~L~~L~l~~n~l~~-----------------~~~l~~~~~L~~L~l~~n~l~~l---~~l~ 169 (199)
T d2omxa2 110 GLTLFNNQITDIDPLKNLTNLNRLELSSNTISD-----------------ISALSGLTSLQQLNFSSNQVTDL---KPLA 169 (199)
T ss_dssp EEECCSSCCCCCGGGTTCTTCSEEECCSSCCCC-----------------CGGGTTCTTCSEEECCSSCCCCC---GGGT
T ss_pred cccccccccccccccchhhhhHHhhhhhhhhcc-----------------cccccccccccccccccccccCC---cccc
Confidence 999998865433335558999999998876311 01245566667777766655431 1256
Q ss_pred CCcccceeeccccc
Q 039643 257 KFPLLEDLSVSSSQ 270 (520)
Q Consensus 257 ~l~~L~~L~L~~~~ 270 (520)
++++|+.|+++++.
T Consensus 170 ~l~~L~~L~ls~N~ 183 (199)
T d2omxa2 170 NLTTLERLDISSNK 183 (199)
T ss_dssp TCTTCCEEECCSSC
T ss_pred CCCCCCEEECCCCC
Confidence 67777777777764
No 10
>d2omza2 c.10.2.1 (A:33-416) Internalin A {Listeria monocytogenes [TaxId: 1639]}
Probab=98.81 E-value=2.2e-08 Score=99.63 Aligned_cols=186 Identities=15% Similarity=0.078 Sum_probs=99.9
Q ss_pred cccccCCCccEEEEeccccCCCcccCCCCCCCEEEecceecChHHHHHHHhcCCCcceeeeeccCCcceeccccccccce
Q 039643 120 QAIYSAKLLTTLVLNGCRLDEPLIAINLNSLKNLSLQRVYANEQMVHNLIAECCSLEDLSLRYTLGLKFFSVSKAHKLKN 199 (520)
Q Consensus 120 ~~l~~~~sL~~L~L~~c~l~~p~~~~~l~sLk~L~L~~v~~~~~~l~~Lls~CP~LE~L~L~~c~~l~~l~I~~~~~Lk~ 199 (520)
.....++.+..|.++++.+.........++|++|++.++.+.+- + -+..++.|+.|++.++.......+.++++|+.
T Consensus 191 ~~~~~l~~~~~l~l~~n~i~~~~~~~~~~~L~~L~l~~n~l~~~--~-~l~~l~~L~~L~l~~n~l~~~~~~~~~~~L~~ 267 (384)
T d2omza2 191 SVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDI--G-TLASLTNLTDLDLANNQISNLAPLSGLTKLTE 267 (384)
T ss_dssp GGGGGCTTCSEEECCSSCCCCCGGGGGCTTCCEEECCSSCCCCC--G-GGGGCTTCSEEECCSSCCCCCGGGTTCTTCSE
T ss_pred cccccccccceeeccCCccCCCCcccccCCCCEEECCCCCCCCc--c-hhhcccccchhccccCccCCCCcccccccCCE
Confidence 33445566777777776553322345567777777777766221 1 24566777777777764222223445677777
Q ss_pred EEEecccCCCCceeeeCCceeEEEec-----cccccCCCCCcceEEecccccchhHHHHHHhCCcccceeecccccccc-
Q 039643 200 MVIVDYSRSSELESIVAPSLQQLTLV-----RVIVVATCPNLKKLHLSEIVLEDQEFHELISKFPLLEDLSVSSSQPLE- 273 (520)
Q Consensus 200 L~I~~~~~~~~~~~i~aP~L~~L~l~-----~~~~~~~l~~L~~L~L~~~~~~~~~~~~ll~~l~~L~~L~L~~~~~l~- 273 (520)
|+++++....-......+.++.+... ....+..+++++.++++++.+++- .-++.+++|++|.+++|..-.
T Consensus 268 L~l~~~~l~~~~~~~~~~~l~~l~~~~n~l~~~~~~~~~~~l~~L~ls~n~l~~l---~~l~~l~~L~~L~L~~n~l~~l 344 (384)
T d2omza2 268 LKLGANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYLTLYFNNISDI---SPVSSLTKLQRLFFANNKVSDV 344 (384)
T ss_dssp EECCSSCCCCCGGGTTCTTCSEEECCSSCCSCCGGGGGCTTCSEEECCSSCCSCC---GGGGGCTTCCEEECCSSCCCCC
T ss_pred eeccCcccCCCCccccccccccccccccccccccccchhcccCeEECCCCCCCCC---cccccCCCCCEEECCCCCCCCC
Confidence 77766653111111234455555543 122345566777777776665542 125667777777777664211
Q ss_pred ccccccccccEEEeecCCchh-HHhcCCCCccEeEeccc
Q 039643 274 RVKFSSNLLKRVAFLFCRSLR-AVDLDTPNLLSFTFESV 311 (520)
Q Consensus 274 ~~~~~f~~L~~L~L~~c~~l~-~lL~~~P~L~~L~l~~~ 311 (520)
+.-..+++|++|+++++.-.. ..+.++|+|++|+++++
T Consensus 345 ~~l~~l~~L~~L~l~~N~l~~l~~l~~l~~L~~L~L~~N 383 (384)
T d2omza2 345 SSLANLTNINWLSAGHNQISDLTPLANLTRITQLGLNDQ 383 (384)
T ss_dssp GGGGGCTTCCEEECCSSCCCBCGGGTTCTTCSEEECCCE
T ss_pred hhHcCCCCCCEEECCCCcCCCChhhccCCCCCEeeCCCC
Confidence 111124567777766532211 23566667777766543
No 11
>d1h6ta2 c.10.2.1 (A:31-240) Internalin B {Listeria monocytogenes [TaxId: 1639]}
Probab=98.80 E-value=1.3e-08 Score=93.86 Aligned_cols=161 Identities=17% Similarity=0.181 Sum_probs=101.0
Q ss_pred CCceEEEEEecCCCCCcccccCcccccCCCccEEEEeccccCCCcccCCCCCCCEEEecceecChHHHHHHHhcCCCcce
Q 039643 98 NGVKELHIVVESSPHESAYTLPQAIYSAKLLTTLVLNGCRLDEPLIAINLNSLKNLSLQRVYANEQMVHNLIAECCSLED 177 (520)
Q Consensus 98 ~~VkeL~L~~~~~~~~~~~~LP~~l~~~~sL~~L~L~~c~l~~p~~~~~l~sLk~L~L~~v~~~~~~l~~Lls~CP~LE~ 177 (520)
..+++|++... ....++ .+..+++|++|+|++|.+...+....+++|+.|++.++.+.+ ++ -+.++|.|+.
T Consensus 46 ~~L~~L~l~~~-----~i~~l~-~l~~l~~L~~L~L~~n~i~~l~~~~~l~~L~~L~l~~n~i~~--l~-~l~~l~~L~~ 116 (210)
T d1h6ta2 46 NSIDQIIANNS-----DIKSVQ-GIQYLPNVTKLFLNGNKLTDIKPLANLKNLGWLFLDENKVKD--LS-SLKDLKKLKS 116 (210)
T ss_dssp HTCCEEECTTS-----CCCCCT-TGGGCTTCCEEECCSSCCCCCGGGTTCTTCCEEECCSSCCCC--GG-GGTTCTTCCE
T ss_pred cCccEEECcCC-----CCCCch-hHhhCCCCCEEeCCCccccCccccccCccccccccccccccc--cc-cccccccccc
Confidence 36788877543 112233 466789999999999977543456889999999999998843 22 2577899999
Q ss_pred eeeeccCCcceeccccccccceEEEecccCCCCceeeeCCceeEEEeccccccCCCCCcceEEecccccchhHHHHHHhC
Q 039643 178 LSLRYTLGLKFFSVSKAHKLKNMVIVDYSRSSELESIVAPSLQQLTLVRVIVVATCPNLKKLHLSEIVLEDQEFHELISK 257 (520)
Q Consensus 178 L~L~~c~~l~~l~I~~~~~Lk~L~I~~~~~~~~~~~i~aP~L~~L~l~~~~~~~~l~~L~~L~L~~~~~~~~~~~~ll~~ 257 (520)
|++.++.....-.+.++++|+.+.+.++..... ..+..+++|+.+.++++.+++- .-+.+
T Consensus 117 L~l~~~~~~~~~~l~~l~~l~~l~~~~n~l~~~-----------------~~~~~l~~L~~l~l~~n~l~~i---~~l~~ 176 (210)
T d1h6ta2 117 LSLEHNGISDINGLVHLPQLESLYLGNNKITDI-----------------TVLSRLTKLDTLSLEDNQISDI---VPLAG 176 (210)
T ss_dssp EECTTSCCCCCGGGGGCTTCCEEECCSSCCCCC-----------------GGGGGCTTCSEEECCSSCCCCC---GGGTT
T ss_pred ccccccccccccccccccccccccccccccccc-----------------cccccccccccccccccccccc---ccccC
Confidence 999998643322344578888888887753211 1123455566666655554431 11455
Q ss_pred Ccccceeeccccccccccc--cccccccEEEee
Q 039643 258 FPLLEDLSVSSSQPLERVK--FSSNLLKRVAFL 288 (520)
Q Consensus 258 l~~L~~L~L~~~~~l~~~~--~~f~~L~~L~L~ 288 (520)
+++|+.|.++++.. ..+. ..+++|++|+|+
T Consensus 177 l~~L~~L~Ls~N~i-~~l~~l~~l~~L~~L~Ls 208 (210)
T d1h6ta2 177 LTKLQNLYLSKNHI-SDLRALAGLKNLDVLELF 208 (210)
T ss_dssp CTTCCEEECCSSCC-CBCGGGTTCTTCSEEEEE
T ss_pred CCCCCEEECCCCCC-CCChhhcCCCCCCEEEcc
Confidence 66666666666542 2111 124566666664
No 12
>d1ozna_ c.10.2.7 (A:) Reticulon 4 receptor (Nogo-66 receptor, Ngr) {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.71 E-value=1.7e-08 Score=97.29 Aligned_cols=193 Identities=14% Similarity=0.032 Sum_probs=115.4
Q ss_pred cccCcccccCCCccEEEEeccccCC-C-cccCCCCCCCEEEecceecChHHHHHHHhcCCCcceeeeeccCCcce---ec
Q 039643 116 YTLPQAIYSAKLLTTLVLNGCRLDE-P-LIAINLNSLKNLSLQRVYANEQMVHNLIAECCSLEDLSLRYTLGLKF---FS 190 (520)
Q Consensus 116 ~~LP~~l~~~~sL~~L~L~~c~l~~-p-~~~~~l~sLk~L~L~~v~~~~~~l~~Lls~CP~LE~L~L~~c~~l~~---l~ 190 (520)
..+|..+. +++++|+|+++.+.. | ..+.++++|+.|+++++.+..- ......+++.++.+.+.....+.. ..
T Consensus 24 ~~iP~~ip--~~~~~L~Ls~N~i~~i~~~~f~~l~~L~~L~ls~n~l~~i-~~~~~~~~~~~~~l~~~~~~~~~~l~~~~ 100 (284)
T d1ozna_ 24 QAVPVGIP--AASQRIFLHGNRISHVPAASFRACRNLTILWLHSNVLARI-DAAAFTGLALLEQLDLSDNAQLRSVDPAT 100 (284)
T ss_dssp SSCCTTCC--TTCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEE-CTTTTTTCTTCCEEECCSCTTCCCCCTTT
T ss_pred CccCCCCC--CCCCEEECcCCcCCCCCHHHhhcccccccccccccccccc-ccccccccccccccccccccccccccchh
Confidence 35565543 467888898887743 3 3577888899999887765211 112345677888877765544332 23
Q ss_pred cccccccceEEEecccCCC--CceeeeCCceeEEEecc-------ccccCCCCCcceEEecccccchhHHHHHHhCCccc
Q 039643 191 VSKAHKLKNMVIVDYSRSS--ELESIVAPSLQQLTLVR-------VIVVATCPNLKKLHLSEIVLEDQEFHELISKFPLL 261 (520)
Q Consensus 191 I~~~~~Lk~L~I~~~~~~~--~~~~i~aP~L~~L~l~~-------~~~~~~l~~L~~L~L~~~~~~~~~~~~ll~~l~~L 261 (520)
+.++++|+.|++.++.... .......++|+.+.+.. ...+..+++|++|++.++.++. .....+.++++|
T Consensus 101 ~~~l~~L~~L~l~~n~~~~~~~~~~~~~~~L~~l~l~~N~l~~i~~~~f~~~~~L~~L~l~~N~l~~-l~~~~f~~l~~L 179 (284)
T d1ozna_ 101 FHGLGRLHTLHLDRCGLQELGPGLFRGLAALQYLYLQDNALQALPDDTFRDLGNLTHLFLHGNRISS-VPERAFRGLHSL 179 (284)
T ss_dssp TTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCE-ECTTTTTTCTTC
T ss_pred hcccccCCEEecCCcccccccccccchhcccchhhhccccccccChhHhccccchhhcccccCcccc-cchhhhcccccc
Confidence 5557888888888876321 11122345666666641 1234566777777777766543 122456677777
Q ss_pred ceeecccccccc--ccc-cccccccEEEeecCCchh---HHhcCCCCccEeEecccC
Q 039643 262 EDLSVSSSQPLE--RVK-FSSNLLKRVAFLFCRSLR---AVDLDTPNLLSFTFESVR 312 (520)
Q Consensus 262 ~~L~L~~~~~l~--~~~-~~f~~L~~L~L~~c~~l~---~lL~~~P~L~~L~l~~~~ 312 (520)
+.|.++.+.... +.. ..+++|++|+++.+.-.. ..+..+++|+.|+++++.
T Consensus 180 ~~l~l~~N~l~~i~~~~f~~l~~L~~L~l~~N~i~~~~~~~~~~~~~L~~L~l~~N~ 236 (284)
T d1ozna_ 180 DRLLLHQNRVAHVHPHAFRDLGRLMTLYLFANNLSALPTEALAPLRALQYLRLNDNP 236 (284)
T ss_dssp CEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSCCCHHHHTTCTTCCEEECCSSC
T ss_pred chhhhhhccccccChhHhhhhhhcccccccccccccccccccccccccCEEEecCCC
Confidence 777777765422 111 123567777776643211 455677777777776664
No 13
>d1xkua_ c.10.2.7 (A:) Decorin {Cow (Bos taurus) [TaxId: 9913]}
Probab=98.69 E-value=3.1e-08 Score=96.14 Aligned_cols=86 Identities=20% Similarity=0.165 Sum_probs=46.1
Q ss_pred cccCcccccCCCccEEEEeccccCC-Cc-ccCCCCCCCEEEecceecChHHHHHHHhcCCCcceeeeeccCCcceecccc
Q 039643 116 YTLPQAIYSAKLLTTLVLNGCRLDE-PL-IAINLNSLKNLSLQRVYANEQMVHNLIAECCSLEDLSLRYTLGLKFFSVSK 193 (520)
Q Consensus 116 ~~LP~~l~~~~sL~~L~L~~c~l~~-p~-~~~~l~sLk~L~L~~v~~~~~~l~~Lls~CP~LE~L~L~~c~~l~~l~I~~ 193 (520)
..+|..+. +++++|+|+++.+.. |+ .+.++++|++|++.++.+.. .....+.+++.|+.|++.++. ++.+.-..
T Consensus 23 ~~lP~~l~--~~l~~L~Ls~N~i~~l~~~~f~~l~~L~~L~l~~n~~~~-i~~~~f~~l~~L~~L~l~~n~-l~~l~~~~ 98 (305)
T d1xkua_ 23 EKVPKDLP--PDTALLDLQNNKITEIKDGDFKNLKNLHTLILINNKISK-ISPGAFAPLVKLERLYLSKNQ-LKELPEKM 98 (305)
T ss_dssp CSCCCSCC--TTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCCCC-BCTTTTTTCTTCCEEECCSSC-CSBCCSSC
T ss_pred CccCCCCC--CCCCEEECcCCcCCCcChhHhhccccccccccccccccc-cchhhhhCCCccCEecccCCc-cCcCccch
Confidence 34565553 467777777776533 33 45667777777777665521 001224566777777776664 22211111
Q ss_pred ccccceEEEecc
Q 039643 194 AHKLKNMVIVDY 205 (520)
Q Consensus 194 ~~~Lk~L~I~~~ 205 (520)
.+.|+.|....+
T Consensus 99 ~~~l~~L~~~~n 110 (305)
T d1xkua_ 99 PKTLQELRVHEN 110 (305)
T ss_dssp CTTCCEEECCSS
T ss_pred hhhhhhhhcccc
Confidence 345555555544
No 14
>d1ogqa_ c.10.2.8 (A:) Polygalacturonase inhibiting protein PGIP {Kidney bean (Phaseolus vulgaris) [TaxId: 3885]}
Probab=98.67 E-value=1.1e-08 Score=99.85 Aligned_cols=220 Identities=14% Similarity=0.054 Sum_probs=122.3
Q ss_pred CccEEEEeccccC----CCcccCCCCCCCEEEecce-ecChHHHHHHHhcCCCcceeeeeccCCc--ceeccccccccce
Q 039643 127 LLTTLVLNGCRLD----EPLIAINLNSLKNLSLQRV-YANEQMVHNLIAECCSLEDLSLRYTLGL--KFFSVSKAHKLKN 199 (520)
Q Consensus 127 sL~~L~L~~c~l~----~p~~~~~l~sLk~L~L~~v-~~~~~~l~~Lls~CP~LE~L~L~~c~~l--~~l~I~~~~~Lk~ 199 (520)
.++.|+|+++.+. .|+.+.++++|++|+|+++ .+.+ .++.-++++++|++|+|+++... ....+...++|+.
T Consensus 51 ~v~~L~L~~~~l~g~~~lp~~l~~L~~L~~L~Ls~~N~l~g-~iP~~i~~L~~L~~L~Ls~N~l~~~~~~~~~~~~~L~~ 129 (313)
T d1ogqa_ 51 RVNNLDLSGLNLPKPYPIPSSLANLPYLNFLYIGGINNLVG-PIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVT 129 (313)
T ss_dssp CEEEEEEECCCCSSCEECCGGGGGCTTCSEEEEEEETTEES-CCCGGGGGCTTCSEEEEEEECCEEECCGGGGGCTTCCE
T ss_pred EEEEEECCCCCCCCCCCCChHHhcCcccccccccccccccc-ccccccccccccchhhhccccccccccccccchhhhcc
Confidence 5899999997653 4788899999999999864 4421 23344678899999999988532 1222334677888
Q ss_pred EEEecccCCCCceeeeCCceeEEEeccccccCCCCCcceEEecccccchhHHHHHHhCCccc-ceeeccccccccccccc
Q 039643 200 MVIVDYSRSSELESIVAPSLQQLTLVRVIVVATCPNLKKLHLSEIVLEDQEFHELISKFPLL-EDLSVSSSQPLERVKFS 278 (520)
Q Consensus 200 L~I~~~~~~~~~~~i~aP~L~~L~l~~~~~~~~l~~L~~L~L~~~~~~~~~~~~ll~~l~~L-~~L~L~~~~~l~~~~~~ 278 (520)
+++..+.... . .+..+.++++|+.++++.+.+++.. ...+..++.+ +.+.++.+.........
T Consensus 130 l~l~~N~~~~-----~----------~p~~l~~l~~L~~l~l~~n~l~~~i-p~~~~~l~~l~~~l~~~~n~l~~~~~~~ 193 (313)
T d1ogqa_ 130 LDFSYNALSG-----T----------LPPSISSLPNLVGITFDGNRISGAI-PDSYGSFSKLFTSMTISRNRLTGKIPPT 193 (313)
T ss_dssp EECCSSEEES-----C----------CCGGGGGCTTCCEEECCSSCCEEEC-CGGGGCCCTTCCEEECCSSEEEEECCGG
T ss_pred cccccccccc-----c----------CchhhccCcccceeecccccccccc-cccccccccccccccccccccccccccc
Confidence 8877764210 0 1223566677777777666554321 1223344443 55655554421111112
Q ss_pred cc--cccEEEeecCCch---hHHhcCCCCccEeEecccCCCCcccccccC-CCcE-EEEeccccccChhhHHHHHHHHHh
Q 039643 279 SN--LLKRVAFLFCRSL---RAVDLDTPNLLSFTFESVRIPTISISASHQ-CPWN-VFFVHEHDVGDIDNWYLKLKEFLG 351 (520)
Q Consensus 279 f~--~L~~L~L~~c~~l---~~lL~~~P~L~~L~l~~~~~~~~~~~~l~~-~~L~-v~~~~~~~~g~~~~l~~~~~~~l~ 351 (520)
+. ++..+.+..+... .......++|+.+.+.++.+... +..+.. ..++ +.+..+.+.|.+ +..+.
T Consensus 194 ~~~l~~~~l~l~~~~~~~~~~~~~~~~~~l~~l~~~~~~l~~~-~~~~~~~~~L~~L~Ls~N~l~g~i-------P~~l~ 265 (313)
T d1ogqa_ 194 FANLNLAFVDLSRNMLEGDASVLFGSDKNTQKIHLAKNSLAFD-LGKVGLSKNLNGLDLRNNRIYGTL-------PQGLT 265 (313)
T ss_dssp GGGCCCSEEECCSSEEEECCGGGCCTTSCCSEEECCSSEECCB-GGGCCCCTTCCEEECCSSCCEECC-------CGGGG
T ss_pred ccccccccccccccccccccccccccccccccccccccccccc-ccccccccccccccCccCeecccC-------ChHHh
Confidence 22 2333444332211 14445667777777776655432 111111 1232 345566666654 23356
Q ss_pred ccccccceEEEeccccccccc
Q 039643 352 ASNQIENLLINLRSVNIRQMP 372 (520)
Q Consensus 352 n~~~Le~L~i~~~~~~~~~i~ 372 (520)
+++.|++|.+.. +...+.++
T Consensus 266 ~L~~L~~L~Ls~-N~l~g~iP 285 (313)
T d1ogqa_ 266 QLKFLHSLNVSF-NNLCGEIP 285 (313)
T ss_dssp GCTTCCEEECCS-SEEEEECC
T ss_pred CCCCCCEEECcC-CcccccCC
Confidence 778888888774 44444454
No 15
>d1p9ag_ c.10.2.7 (G:) von Willebrand factor binding domain of glycoprotein Ib alpha {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.65 E-value=2e-08 Score=95.93 Aligned_cols=176 Identities=17% Similarity=0.031 Sum_probs=96.3
Q ss_pred cccCcccccCCCccEEEEeccccCC-C-cccCCCCCCCEEEecceecChHHHHHHHhcCCCcceeeeeccCCcc-eeccc
Q 039643 116 YTLPQAIYSAKLLTTLVLNGCRLDE-P-LIAINLNSLKNLSLQRVYANEQMVHNLIAECCSLEDLSLRYTLGLK-FFSVS 192 (520)
Q Consensus 116 ~~LP~~l~~~~sL~~L~L~~c~l~~-p-~~~~~l~sLk~L~L~~v~~~~~~l~~Lls~CP~LE~L~L~~c~~l~-~l~I~ 192 (520)
..+|..+. ++|++|+|+++.+.. | ..+.++++|++|+|+++.+.. ++ ..+.+|.|+.|+|+++..-. ...+.
T Consensus 23 ~~iP~~lp--~~l~~L~Ls~N~i~~l~~~~f~~l~~L~~L~L~~N~l~~--l~-~~~~l~~L~~L~Ls~N~l~~~~~~~~ 97 (266)
T d1p9ag_ 23 TALPPDLP--KDTTILHLSENLLYTFSLATLMPYTRLTQLNLDRAELTK--LQ-VDGTLPVLGTLDLSHNQLQSLPLLGQ 97 (266)
T ss_dssp SSCCSCCC--TTCCEEECTTSCCSEEEGGGGTTCTTCCEEECTTSCCCE--EE-CCSCCTTCCEEECCSSCCSSCCCCTT
T ss_pred CeeCcCcC--cCCCEEECcCCcCCCcCHHHhhccccccccccccccccc--cc-cccccccccccccccccccccccccc
Confidence 45666553 478888888876643 3 456778888888888876632 11 12457778888887764211 11233
Q ss_pred cccccceEEEecccCCCCceeeeCCceeEEEeccccccCCCCCcceEEecccccchhHHHHHHhCCcccceeeccccccc
Q 039643 193 KAHKLKNMVIVDYSRSSELESIVAPSLQQLTLVRVIVVATCPNLKKLHLSEIVLEDQEFHELISKFPLLEDLSVSSSQPL 272 (520)
Q Consensus 193 ~~~~Lk~L~I~~~~~~~~~~~i~aP~L~~L~l~~~~~~~~l~~L~~L~L~~~~~~~~~~~~ll~~l~~L~~L~L~~~~~l 272 (520)
++++|+.|+++++.... + ....+..+++++++.+..+.++. .....+..+++++.|.++++..-
T Consensus 98 ~l~~L~~L~l~~~~~~~--~-------------~~~~~~~l~~l~~L~l~~n~l~~-l~~~~~~~l~~l~~l~l~~N~l~ 161 (266)
T d1p9ag_ 98 TLPALTVLDVSFNRLTS--L-------------PLGALRGLGELQELYLKGNELKT-LPPGLLTPTPKLEKLSLANNNLT 161 (266)
T ss_dssp TCTTCCEEECCSSCCCC--C-------------CSSTTTTCTTCCEEECTTSCCCC-CCTTTTTTCTTCCEEECTTSCCS
T ss_pred cccccccccccccccce--e-------------eccccccccccccccccccccce-eccccccccccchhccccccccc
Confidence 46777777777665311 0 01123445555556555544432 12233455566666666655421
Q ss_pred c--cc-ccccccccEEEeecCCchh---HHhcCCCCccEeEecccCC
Q 039643 273 E--RV-KFSSNLLKRVAFLFCRSLR---AVDLDTPNLLSFTFESVRI 313 (520)
Q Consensus 273 ~--~~-~~~f~~L~~L~L~~c~~l~---~lL~~~P~L~~L~l~~~~~ 313 (520)
. +. -..+.+|++|+|+++. +. .-+...++|+.|.++++..
T Consensus 162 ~~~~~~~~~l~~L~~L~Ls~N~-L~~lp~~~~~~~~L~~L~L~~Np~ 207 (266)
T d1p9ag_ 162 ELPAGLLNGLENLDTLLLQENS-LYTIPKGFFGSHLLPFAFLHGNPW 207 (266)
T ss_dssp CCCTTTTTTCTTCCEEECCSSC-CCCCCTTTTTTCCCSEEECCSCCB
T ss_pred ccCccccccccccceeecccCC-CcccChhHCCCCCCCEEEecCCCC
Confidence 1 11 1124556666665532 22 2234567778888877743
No 16
>d1xkua_ c.10.2.7 (A:) Decorin {Cow (Bos taurus) [TaxId: 9913]}
Probab=98.55 E-value=2.5e-07 Score=89.46 Aligned_cols=208 Identities=13% Similarity=0.065 Sum_probs=110.9
Q ss_pred CCceEEEEEecCCCCCcccccCc-ccccCCCccEEEEeccccCC--CcccCCCCCCCEEEecceecChHHHHHHHhcCCC
Q 039643 98 NGVKELHIVVESSPHESAYTLPQ-AIYSAKLLTTLVLNGCRLDE--PLIAINLNSLKNLSLQRVYANEQMVHNLIAECCS 174 (520)
Q Consensus 98 ~~VkeL~L~~~~~~~~~~~~LP~-~l~~~~sL~~L~L~~c~l~~--p~~~~~l~sLk~L~L~~v~~~~~~l~~Lls~CP~ 174 (520)
++++.|++... ....+|+ .+..+++|++|+++++.+.. |..+.+++.|++|+|.++.+.. ++ -..++.
T Consensus 31 ~~l~~L~Ls~N-----~i~~l~~~~f~~l~~L~~L~l~~n~~~~i~~~~f~~l~~L~~L~l~~n~l~~--l~--~~~~~~ 101 (305)
T d1xkua_ 31 PDTALLDLQNN-----KITEIKDGDFKNLKNLHTLILINNKISKISPGAFAPLVKLERLYLSKNQLKE--LP--EKMPKT 101 (305)
T ss_dssp TTCCEEECCSS-----CCCCBCTTTTTTCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCCSB--CC--SSCCTT
T ss_pred CCCCEEECcCC-----cCCCcChhHhhccccccccccccccccccchhhhhCCCccCEecccCCccCc--Cc--cchhhh
Confidence 57888888664 3456776 46678999999999986633 4567889999999999887631 00 123466
Q ss_pred cceeeeeccCC--cceeccccccccceEEEecccCCCC----ceeeeCCceeEEEeccc----cccCCCCCcceEEeccc
Q 039643 175 LEDLSLRYTLG--LKFFSVSKAHKLKNMVIVDYSRSSE----LESIVAPSLQQLTLVRV----IVVATCPNLKKLHLSEI 244 (520)
Q Consensus 175 LE~L~L~~c~~--l~~l~I~~~~~Lk~L~I~~~~~~~~----~~~i~aP~L~~L~l~~~----~~~~~l~~L~~L~L~~~ 244 (520)
|+.|.+.++.. +..........+..+....+..... ......++|+.+.+... .....+++|++|+++++
T Consensus 102 l~~L~~~~n~l~~l~~~~~~~~~~~~~l~~~~n~~~~~~~~~~~~~~l~~L~~l~l~~n~l~~l~~~~~~~L~~L~l~~n 181 (305)
T d1xkua_ 102 LQELRVHENEITKVRKSVFNGLNQMIVVELGTNPLKSSGIENGAFQGMKKLSYIRIADTNITTIPQGLPPSLTELHLDGN 181 (305)
T ss_dssp CCEEECCSSCCCBBCHHHHTTCTTCCEEECCSSCCCGGGBCTTGGGGCTTCCEEECCSSCCCSCCSSCCTTCSEEECTTS
T ss_pred hhhhhccccchhhhhhhhhhccccccccccccccccccCCCccccccccccCccccccCCccccCcccCCccCEEECCCC
Confidence 77777666532 1111111233444444443321100 01122345555555421 11123456666666654
Q ss_pred ccchhHHHHHHhCCcccceeecccccccc--cc-ccccccccEEEeecCCchh--HHhcCCCCccEeEecccCCCC
Q 039643 245 VLEDQEFHELISKFPLLEDLSVSSSQPLE--RV-KFSSNLLKRVAFLFCRSLR--AVDLDTPNLLSFTFESVRIPT 315 (520)
Q Consensus 245 ~~~~~~~~~ll~~l~~L~~L~L~~~~~l~--~~-~~~f~~L~~L~L~~c~~l~--~lL~~~P~L~~L~l~~~~~~~ 315 (520)
..+.. ....+.+++.++.|.++++.... +. ...+++|+.|+|+++.-.. .-+..+|+|+.|+++++.+..
T Consensus 182 ~~~~~-~~~~~~~~~~l~~L~~s~n~l~~~~~~~~~~l~~L~~L~L~~N~L~~lp~~l~~l~~L~~L~Ls~N~i~~ 256 (305)
T d1xkua_ 182 KITKV-DAASLKGLNNLAKLGLSFNSISAVDNGSLANTPHLRELHLNNNKLVKVPGGLADHKYIQVVYLHNNNISA 256 (305)
T ss_dssp CCCEE-CTGGGTTCTTCCEEECCSSCCCEECTTTGGGSTTCCEEECCSSCCSSCCTTTTTCSSCCEEECCSSCCCC
T ss_pred cCCCC-ChhHhhccccccccccccccccccccccccccccceeeecccccccccccccccccCCCEEECCCCccCc
Confidence 43321 12335566666666666554311 11 1123466666666542211 234556666666666665543
No 17
>d1p9ag_ c.10.2.7 (G:) von Willebrand factor binding domain of glycoprotein Ib alpha {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.54 E-value=2.7e-08 Score=95.03 Aligned_cols=168 Identities=18% Similarity=0.158 Sum_probs=111.0
Q ss_pred CCceEEEEEecCCCCCcccccCc-ccccCCCccEEEEeccccCCCcccCCCCCCCEEEecceecChHHHHHHHhcCCCcc
Q 039643 98 NGVKELHIVVESSPHESAYTLPQ-AIYSAKLLTTLVLNGCRLDEPLIAINLNSLKNLSLQRVYANEQMVHNLIAECCSLE 176 (520)
Q Consensus 98 ~~VkeL~L~~~~~~~~~~~~LP~-~l~~~~sL~~L~L~~c~l~~p~~~~~l~sLk~L~L~~v~~~~~~l~~Lls~CP~LE 176 (520)
+++++|+|... ....+|. .+..+++|++|+|+++.+...+....+++|++|+|+++.+.. +...+.+.+.|+
T Consensus 31 ~~l~~L~Ls~N-----~i~~l~~~~f~~l~~L~~L~L~~N~l~~l~~~~~l~~L~~L~Ls~N~l~~--~~~~~~~l~~L~ 103 (266)
T d1p9ag_ 31 KDTTILHLSEN-----LLYTFSLATLMPYTRLTQLNLDRAELTKLQVDGTLPVLGTLDLSHNQLQS--LPLLGQTLPALT 103 (266)
T ss_dssp TTCCEEECTTS-----CCSEEEGGGGTTCTTCCEEECTTSCCCEEECCSCCTTCCEEECCSSCCSS--CCCCTTTCTTCC
T ss_pred cCCCEEECcCC-----cCCCcCHHHhhccccccccccccccccccccccccccccccccccccccc--cccccccccccc
Confidence 57899988654 2345665 455789999999999977543446789999999999998732 122356789999
Q ss_pred eeeeeccCCc--ceeccccccccceEEEecccCCCCceeeeCCceeEEEeccccccCCCCCcceEEecccccchhHHHHH
Q 039643 177 DLSLRYTLGL--KFFSVSKAHKLKNMVIVDYSRSSELESIVAPSLQQLTLVRVIVVATCPNLKKLHLSEIVLEDQEFHEL 254 (520)
Q Consensus 177 ~L~L~~c~~l--~~l~I~~~~~Lk~L~I~~~~~~~~~~~i~aP~L~~L~l~~~~~~~~l~~L~~L~L~~~~~~~~~~~~l 254 (520)
.|+++++... .......+++|+.|.+.++.... + ....+..+++|+.++++++.++. .....
T Consensus 104 ~L~l~~~~~~~~~~~~~~~l~~l~~L~l~~n~l~~--l-------------~~~~~~~l~~l~~l~l~~N~l~~-~~~~~ 167 (266)
T d1p9ag_ 104 VLDVSFNRLTSLPLGALRGLGELQELYLKGNELKT--L-------------PPGLLTPTPKLEKLSLANNNLTE-LPAGL 167 (266)
T ss_dssp EEECCSSCCCCCCSSTTTTCTTCCEEECTTSCCCC--C-------------CTTTTTTCTTCCEEECTTSCCSC-CCTTT
T ss_pred cccccccccceeeccccccccccccccccccccce--e-------------ccccccccccchhcccccccccc-cCccc
Confidence 9999988632 22233447888999888876310 0 01123556677777777766543 22244
Q ss_pred HhCCcccceeecccccccccc--c-cccccccEEEeec
Q 039643 255 ISKFPLLEDLSVSSSQPLERV--K-FSSNLLKRVAFLF 289 (520)
Q Consensus 255 l~~l~~L~~L~L~~~~~l~~~--~-~~f~~L~~L~L~~ 289 (520)
++++++|+.|+|+++.. ..+ + ....+|++|.|.+
T Consensus 168 ~~~l~~L~~L~Ls~N~L-~~lp~~~~~~~~L~~L~L~~ 204 (266)
T d1p9ag_ 168 LNGLENLDTLLLQENSL-YTIPKGFFGSHLLPFAFLHG 204 (266)
T ss_dssp TTTCTTCCEEECCSSCC-CCCCTTTTTTCCCSEEECCS
T ss_pred cccccccceeecccCCC-cccChhHCCCCCCCEEEecC
Confidence 66777778887777653 212 1 2345677777775
No 18
>d1ozna_ c.10.2.7 (A:) Reticulon 4 receptor (Nogo-66 receptor, Ngr) {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.27 E-value=5e-07 Score=86.56 Aligned_cols=185 Identities=14% Similarity=0.036 Sum_probs=124.4
Q ss_pred CCceEEEEEecCCCCCcccccCc-ccccCCCccEEEEeccccCC--CcccCCCCCCCEEEeccee-cChHHHHHHHhcCC
Q 039643 98 NGVKELHIVVESSPHESAYTLPQ-AIYSAKLLTTLVLNGCRLDE--PLIAINLNSLKNLSLQRVY-ANEQMVHNLIAECC 173 (520)
Q Consensus 98 ~~VkeL~L~~~~~~~~~~~~LP~-~l~~~~sL~~L~L~~c~l~~--p~~~~~l~sLk~L~L~~v~-~~~~~l~~Lls~CP 173 (520)
.++++|+|... ....+|+ .+..++.|++|+++++.+.. +....+++.++.+...... +.. .-...+++++
T Consensus 32 ~~~~~L~Ls~N-----~i~~i~~~~f~~l~~L~~L~ls~n~l~~i~~~~~~~~~~~~~l~~~~~~~~~~-l~~~~~~~l~ 105 (284)
T d1ozna_ 32 AASQRIFLHGN-----RISHVPAASFRACRNLTILWLHSNVLARIDAAAFTGLALLEQLDLSDNAQLRS-VDPATFHGLG 105 (284)
T ss_dssp TTCSEEECTTS-----CCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSCTTCCC-CCTTTTTTCT
T ss_pred CCCCEEECcCC-----cCCCCCHHHhhcccccccccccccccccccccccccccccccccccccccccc-ccchhhcccc
Confidence 56888988653 2345665 46678999999999976632 3455677888888765432 211 1112357889
Q ss_pred CcceeeeeccCC--cceeccccccccceEEEecccCCC-Cceee-eCCceeEEEecc-------ccccCCCCCcceEEec
Q 039643 174 SLEDLSLRYTLG--LKFFSVSKAHKLKNMVIVDYSRSS-ELESI-VAPSLQQLTLVR-------VIVVATCPNLKKLHLS 242 (520)
Q Consensus 174 ~LE~L~L~~c~~--l~~l~I~~~~~Lk~L~I~~~~~~~-~~~~i-~aP~L~~L~l~~-------~~~~~~l~~L~~L~L~ 242 (520)
+|+.|++.++.. +........++|+.+++.++.... +...+ ..++|+.|.+.. ...+.++++|+.+.+.
T Consensus 106 ~L~~L~l~~n~~~~~~~~~~~~~~~L~~l~l~~N~l~~i~~~~f~~~~~L~~L~l~~N~l~~l~~~~f~~l~~L~~l~l~ 185 (284)
T d1ozna_ 106 RLHTLHLDRCGLQELGPGLFRGLAALQYLYLQDNALQALPDDTFRDLGNLTHLFLHGNRISSVPERAFRGLHSLDRLLLH 185 (284)
T ss_dssp TCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECC
T ss_pred cCCEEecCCcccccccccccchhcccchhhhccccccccChhHhccccchhhcccccCcccccchhhhccccccchhhhh
Confidence 999999998863 222233346889999999886421 11122 467899998752 2346788999999999
Q ss_pred ccccchhHHHHHHhCCcccceeecccccccc--ccc-cccccccEEEeec
Q 039643 243 EIVLEDQEFHELISKFPLLEDLSVSSSQPLE--RVK-FSSNLLKRVAFLF 289 (520)
Q Consensus 243 ~~~~~~~~~~~ll~~l~~L~~L~L~~~~~l~--~~~-~~f~~L~~L~L~~ 289 (520)
.+.+++ .....++++++|+.|+++.+.... +.. ....+|++|.+++
T Consensus 186 ~N~l~~-i~~~~f~~l~~L~~L~l~~N~i~~~~~~~~~~~~~L~~L~l~~ 234 (284)
T d1ozna_ 186 QNRVAH-VHPHAFRDLGRLMTLYLFANNLSALPTEALAPLRALQYLRLND 234 (284)
T ss_dssp SSCCCE-ECTTTTTTCTTCCEEECCSSCCSCCCHHHHTTCTTCCEEECCS
T ss_pred hccccc-cChhHhhhhhhcccccccccccccccccccccccccCEEEecC
Confidence 877764 223567889999999999877532 111 2356799999976
No 19
>d1xwdc1 c.10.2.7 (C:18-259) Follicle-stimulating hormone receptor {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.26 E-value=5.3e-07 Score=83.96 Aligned_cols=89 Identities=10% Similarity=0.161 Sum_probs=55.0
Q ss_pred ccCcccccCCCccEEEEeccccCC-Cc-ccCCCCCCCEEEecceecChHHHHHHHhcCCCcceeeeeccCCcceec---c
Q 039643 117 TLPQAIYSAKLLTTLVLNGCRLDE-PL-IAINLNSLKNLSLQRVYANEQMVHNLIAECCSLEDLSLRYTLGLKFFS---V 191 (520)
Q Consensus 117 ~LP~~l~~~~sL~~L~L~~c~l~~-p~-~~~~l~sLk~L~L~~v~~~~~~l~~Lls~CP~LE~L~L~~c~~l~~l~---I 191 (520)
.+|..++ +++++|+|+++.+.. |+ .+.++++|++|+|+++.+....-...+.+++.+++|.+..+..+.... +
T Consensus 22 ~iP~~l~--~~l~~L~Ls~n~i~~l~~~~f~~l~~L~~L~ls~n~~~~~i~~~~f~~l~~l~~l~~~~~n~l~~~~~~~~ 99 (242)
T d1xwdc1 22 EIPSDLP--RNAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDVLEVIEADVFSNLPKLHEIRIEKANNLLYINPEAF 99 (242)
T ss_dssp SCCSCSC--SCCSEEEEESCCCCEECTTTTTTCTTCCEEEEESCTTCCEECSSSEESCTTCCEEEEECCTTCCEECTTSE
T ss_pred CcCCCCC--CCCCEEECcCCcCCccChhHhhccchhhhhhhccccccceeeccccccccccccccccccccccccccccc
Confidence 5666554 467888888876643 33 457788888888877754211001124567788888777765443322 3
Q ss_pred ccccccceEEEecccC
Q 039643 192 SKAHKLKNMVIVDYSR 207 (520)
Q Consensus 192 ~~~~~Lk~L~I~~~~~ 207 (520)
.++++|+.|.+.++..
T Consensus 100 ~~l~~L~~l~l~~~~l 115 (242)
T d1xwdc1 100 QNLPNLQYLLISNTGI 115 (242)
T ss_dssp ECCTTCCEEEEESCCC
T ss_pred cccccccccccchhhh
Confidence 4467888888877753
No 20
>d2ca6a1 c.10.1.2 (A:2-345) Rna1p (RanGAP1), N-terminal domain {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}
Probab=98.21 E-value=9.5e-07 Score=86.90 Aligned_cols=230 Identities=17% Similarity=0.179 Sum_probs=139.4
Q ss_pred CccHHHHHHHHH-hCCceEEEEEecCCCCCcccccCcccccCCCccEEEEeccccCC-----C-------cccCCCCCCC
Q 039643 85 SSLVDKWIGLAV-GNGVKELHIVVESSPHESAYTLPQAIYSAKLLTTLVLNGCRLDE-----P-------LIAINLNSLK 151 (520)
Q Consensus 85 ~~~v~~Wl~~a~-~~~VkeL~L~~~~~~~~~~~~LP~~l~~~~sL~~L~L~~c~l~~-----p-------~~~~~l~sLk 151 (520)
..++..++.... ...+++|+|............+-..+...++|+.|+++++.... + ......++|+
T Consensus 17 ~e~~~~l~~~L~~~~~l~~L~Ls~n~i~~~~~~~l~~~l~~~~~L~~l~l~~~~~~~~~~~~~~~~~~l~~~l~~~~~L~ 96 (344)
T d2ca6a1 17 TEDEKSVFAVLLEDDSVKEIVLSGNTIGTEAARWLSENIASKKDLEIAEFSDIFTGRVKDEIPEALRLLLQALLKCPKLH 96 (344)
T ss_dssp SHHHHTTSHHHHHCSCCCEEECTTSEECHHHHHHHHHTTTTCTTCCEEECCSCCTTSCGGGSHHHHHHHHHHHTTCTTCC
T ss_pred HHHHHHHHHHHhhCCCCCEEECcCCcCCHHHHHHHHHHHHhCCCCCEEECCCCcccccccccchHHHHHHHHHhhCCCcc
Confidence 345666665444 36799988854310111223444556677899999998764321 1 1235678999
Q ss_pred EEEecceecChHH---HHHHHhcCCCcceeeeeccCCc-----------ceec----cccccccceEEEecccCCCCce-
Q 039643 152 NLSLQRVYANEQM---VHNLIAECCSLEDLSLRYTLGL-----------KFFS----VSKAHKLKNMVIVDYSRSSELE- 212 (520)
Q Consensus 152 ~L~L~~v~~~~~~---l~~Lls~CP~LE~L~L~~c~~l-----------~~l~----I~~~~~Lk~L~I~~~~~~~~~~- 212 (520)
.|+|+++.+++.. +...+..++.|+.|.+.+|..- .... ..+.+.|+.+.+.++.......
T Consensus 97 ~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~l~~n~l~~~~~~~l~~~l~~~~~~~~~~~~~~L~~l~l~~n~i~~~~~~ 176 (344)
T d2ca6a1 97 TVRLSDNAFGPTAQEPLIDFLSKHTPLEHLYLHNNGLGPQAGAKIARALQELAVNKKAKNAPPLRSIICGRNRLENGSMK 176 (344)
T ss_dssp EEECCSCCCCTTTHHHHHHHHHHCTTCCEEECCSSCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCEEECCSSCCTGGGHH
T ss_pred cccccccccccccccchhhhhcccccchheecccccccccccccccccccccccccccccCcccceeecccccccccccc
Confidence 9999999885443 5555678899999999888520 0000 1125788888888765321111
Q ss_pred -----eeeCCceeEEEecc------------ccccCCCCCcceEEecccccchhH---HHHHHhCCcccceeeccccccc
Q 039643 213 -----SIVAPSLQQLTLVR------------VIVVATCPNLKKLHLSEIVLEDQE---FHELISKFPLLEDLSVSSSQPL 272 (520)
Q Consensus 213 -----~i~aP~L~~L~l~~------------~~~~~~l~~L~~L~L~~~~~~~~~---~~~ll~~l~~L~~L~L~~~~~l 272 (520)
.-..++|+.|.+.. ...+..+++|+.|+++.+.++... +...+..+++|+.|.|++|..-
T Consensus 177 ~l~~~l~~~~~L~~L~L~~n~i~~~g~~~~l~~~l~~~~~L~~L~Ls~N~i~~~g~~~L~~~l~~~~~L~~L~Ls~n~i~ 256 (344)
T d2ca6a1 177 EWAKTFQSHRLLHTVKMVQNGIRPEGIEHLLLEGLAYCQELKVLDLQDNTFTHLGSSALAIALKSWPNLRELGLNDCLLS 256 (344)
T ss_dssp HHHHHHHHCTTCCEEECCSSCCCHHHHHHHHHTTGGGCTTCCEEECCSSCCHHHHHHHHHHHGGGCTTCCEEECTTCCCC
T ss_pred cccchhhhhhhhcccccccccccccccccchhhhhcchhhhcccccccccccccccccccccccccccchhhhhhcCccC
Confidence 12356788887741 012456778888888877765532 3455677888888888887631
Q ss_pred c----cc-----ccccccccEEEeecCCc-------hhHHh-cCCCCccEeEecccCCC
Q 039643 273 E----RV-----KFSSNLLKRVAFLFCRS-------LRAVD-LDTPNLLSFTFESVRIP 314 (520)
Q Consensus 273 ~----~~-----~~~f~~L~~L~L~~c~~-------l~~lL-~~~P~L~~L~l~~~~~~ 314 (520)
. .+ ...+.+|++|+++++.- +...+ ...|+|+.|++.++.++
T Consensus 257 ~~g~~~l~~~l~~~~~~~L~~L~ls~N~i~~~~~~~l~~~l~~~~~~L~~L~l~~N~~~ 315 (344)
T d2ca6a1 257 ARGAAAVVDAFSKLENIGLQTLRLQYNEIELDAVRTLKTVIDEKMPDLLFLELNGNRFS 315 (344)
T ss_dssp HHHHHHHHHHHHTCSSCCCCEEECCSSCCBHHHHHHHHHHHHHHCTTCCEEECTTSBSC
T ss_pred chhhHHHHHHhhhccCCCCCEEECCCCcCChHHHHHHHHHHHccCCCCCEEECCCCcCC
Confidence 0 11 11235688888876532 11333 35778888888777554
No 21
>d1a9na_ c.10.2.4 (A:) Splicesomal U2A' protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.20 E-value=4.7e-07 Score=79.79 Aligned_cols=127 Identities=13% Similarity=0.064 Sum_probs=78.8
Q ss_pred cccCCCccEEEEeccccCC-CcccCCCCCCCEEEecceecChHHHHHHHhcCCCcceeeeeccCCcceec---ccccccc
Q 039643 122 IYSAKLLTTLVLNGCRLDE-PLIAINLNSLKNLSLQRVYANEQMVHNLIAECCSLEDLSLRYTLGLKFFS---VSKAHKL 197 (520)
Q Consensus 122 l~~~~sL~~L~L~~c~l~~-p~~~~~l~sLk~L~L~~v~~~~~~l~~Lls~CP~LE~L~L~~c~~l~~l~---I~~~~~L 197 (520)
+..+..|++|+|+++.+.. +.....++.|+.|+|+++.+.. ++ -++++|.|+.|++++|.- ..+. ..++++|
T Consensus 14 ~~n~~~lr~L~L~~n~I~~i~~~~~~l~~L~~L~Ls~N~i~~--l~-~~~~l~~L~~L~ls~N~i-~~l~~~~~~~l~~L 89 (162)
T d1a9na_ 14 YTNAVRDRELDLRGYKIPVIENLGATLDQFDAIDFSDNEIRK--LD-GFPLLRRLKTLLVNNNRI-CRIGEGLDQALPDL 89 (162)
T ss_dssp EECTTSCEEEECTTSCCCSCCCGGGGTTCCSEEECCSSCCCE--EC-CCCCCSSCCEEECCSSCC-CEECSCHHHHCTTC
T ss_pred ccCcCcCcEEECCCCCCCccCccccccccCCEEECCCCCCCc--cC-CcccCcchhhhhcccccc-cCCCcccccccccc
Confidence 3456678888888887643 4445678888888888887632 11 146678888888887752 2211 2236777
Q ss_pred ceEEEecccCCCCceeeeCCceeEEEeccccccCCCCCcceEEecccccchh--HHHHHHhCCcccceeec
Q 039643 198 KNMVIVDYSRSSELESIVAPSLQQLTLVRVIVVATCPNLKKLHLSEIVLEDQ--EFHELISKFPLLEDLSV 266 (520)
Q Consensus 198 k~L~I~~~~~~~~~~~i~aP~L~~L~l~~~~~~~~l~~L~~L~L~~~~~~~~--~~~~ll~~l~~L~~L~L 266 (520)
+.|++.++.... + + ....+..+++|++++++++.++.. .-...+..+|+|+.|+-
T Consensus 90 ~~L~L~~N~i~~--~----~--------~l~~l~~l~~L~~L~l~~N~i~~~~~~r~~~i~~lp~L~~LD~ 146 (162)
T d1a9na_ 90 TELILTNNSLVE--L----G--------DLDPLASLKSLTYLCILRNPVTNKKHYRLYVIYKVPQVRVLDF 146 (162)
T ss_dssp CEEECCSCCCCC--G----G--------GGGGGGGCTTCCEEECCSSGGGGSTTHHHHHHHHCTTCSEETT
T ss_pred ccceeccccccc--c----c--------cccccccccccchhhcCCCccccccchHHHHHHHCCCcCeeCC
Confidence 777777775310 0 0 011346678888888887766431 12345677888887763
No 22
>d2ca6a1 c.10.1.2 (A:2-345) Rna1p (RanGAP1), N-terminal domain {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}
Probab=98.18 E-value=4.7e-07 Score=89.16 Aligned_cols=197 Identities=14% Similarity=0.152 Sum_probs=108.6
Q ss_pred cccCcccccCCCccEEEEeccccCC------CcccCCCCCCCEEEecceecC------hHH---HHHHHhcCCCcceeee
Q 039643 116 YTLPQAIYSAKLLTTLVLNGCRLDE------PLIAINLNSLKNLSLQRVYAN------EQM---VHNLIAECCSLEDLSL 180 (520)
Q Consensus 116 ~~LP~~l~~~~sL~~L~L~~c~l~~------p~~~~~l~sLk~L~L~~v~~~------~~~---l~~Lls~CP~LE~L~L 180 (520)
..+...+....+|+.|+|+++.+.. .......++|+.|++.++... ... +...+..|+.|+.|+|
T Consensus 21 ~~l~~~L~~~~~l~~L~Ls~n~i~~~~~~~l~~~l~~~~~L~~l~l~~~~~~~~~~~~~~~~~~l~~~l~~~~~L~~L~L 100 (344)
T d2ca6a1 21 KSVFAVLLEDDSVKEIVLSGNTIGTEAARWLSENIASKKDLEIAEFSDIFTGRVKDEIPEALRLLLQALLKCPKLHTVRL 100 (344)
T ss_dssp HTTSHHHHHCSCCCEEECTTSEECHHHHHHHHHTTTTCTTCCEEECCSCCTTSCGGGSHHHHHHHHHHHTTCTTCCEEEC
T ss_pred HHHHHHHhhCCCCCEEECcCCcCCHHHHHHHHHHHHhCCCCCEEECCCCcccccccccchHHHHHHHHHhhCCCcccccc
Confidence 3455666678899999999875522 224567899999999876531 122 3344678999999999
Q ss_pred eccCC----ccee--ccccccccceEEEecccCCCCceeeeCCceeEEEeccccccCCCCCcceEEecccccchh---HH
Q 039643 181 RYTLG----LKFF--SVSKAHKLKNMVIVDYSRSSELESIVAPSLQQLTLVRVIVVATCPNLKKLHLSEIVLEDQ---EF 251 (520)
Q Consensus 181 ~~c~~----l~~l--~I~~~~~Lk~L~I~~~~~~~~~~~i~aP~L~~L~l~~~~~~~~l~~L~~L~L~~~~~~~~---~~ 251 (520)
.+|.. +..+ .+..+++|+.|.+.++.........-+..|..+.. .......+.|+.+.++.+.++.. .+
T Consensus 101 ~~n~i~~~~~~~l~~~l~~~~~L~~L~l~~n~l~~~~~~~l~~~l~~~~~--~~~~~~~~~L~~l~l~~n~i~~~~~~~l 178 (344)
T d2ca6a1 101 SDNAFGPTAQEPLIDFLSKHTPLEHLYLHNNGLGPQAGAKIARALQELAV--NKKAKNAPPLRSIICGRNRLENGSMKEW 178 (344)
T ss_dssp CSCCCCTTTHHHHHHHHHHCTTCCEEECCSSCCHHHHHHHHHHHHHHHHH--HHHHHTCCCCCEEECCSSCCTGGGHHHH
T ss_pred cccccccccccchhhhhcccccchheeccccccccccccccccccccccc--ccccccCcccceeecccccccccccccc
Confidence 98852 1111 12236899999998876421100000000000000 00012345566666655554432 23
Q ss_pred HHHHhCCcccceeecccccccc--------ccccccccccEEEeecCCc-------hhHHhcCCCCccEeEecccCCC
Q 039643 252 HELISKFPLLEDLSVSSSQPLE--------RVKFSSNLLKRVAFLFCRS-------LRAVDLDTPNLLSFTFESVRIP 314 (520)
Q Consensus 252 ~~ll~~l~~L~~L~L~~~~~l~--------~~~~~f~~L~~L~L~~c~~-------l~~lL~~~P~L~~L~l~~~~~~ 314 (520)
...+..+++++.|.++.|..-. ..-...++|++|+|+++.- +...+..+|+|++|.+.++.+.
T Consensus 179 ~~~l~~~~~L~~L~L~~n~i~~~g~~~~l~~~l~~~~~L~~L~Ls~N~i~~~g~~~L~~~l~~~~~L~~L~Ls~n~i~ 256 (344)
T d2ca6a1 179 AKTFQSHRLLHTVKMVQNGIRPEGIEHLLLEGLAYCQELKVLDLQDNTFTHLGSSALAIALKSWPNLRELGLNDCLLS 256 (344)
T ss_dssp HHHHHHCTTCCEEECCSSCCCHHHHHHHHHTTGGGCTTCCEEECCSSCCHHHHHHHHHHHGGGCTTCCEEECTTCCCC
T ss_pred cchhhhhhhhcccccccccccccccccchhhhhcchhhhcccccccccccccccccccccccccccchhhhhhcCccC
Confidence 3445556666676666654210 0111234566676665432 1145566777777777776554
No 23
>d1dcea3 c.10.2.2 (A:444-567) Rab geranylgeranyltransferase alpha-subunit, C-terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=98.18 E-value=4.8e-07 Score=76.00 Aligned_cols=119 Identities=17% Similarity=0.147 Sum_probs=49.9
Q ss_pred EEEEeccccCCCcccCCCCCCCEEEecceecChHHHHHHHhcCCCcceeeeeccCCcceeccccccccceEEEecccCCC
Q 039643 130 TLVLNGCRLDEPLIAINLNSLKNLSLQRVYANEQMVHNLIAECCSLEDLSLRYTLGLKFFSVSKAHKLKNMVIVDYSRSS 209 (520)
Q Consensus 130 ~L~L~~c~l~~p~~~~~l~sLk~L~L~~v~~~~~~l~~Lls~CP~LE~L~L~~c~~l~~l~I~~~~~Lk~L~I~~~~~~~ 209 (520)
+|+|+++.+...+....+++|++|+|+++.+.. ++.-++++++|+.|+++++.--..-.+.++++|+.|+++++....
T Consensus 2 ~L~Ls~n~l~~l~~l~~l~~L~~L~ls~N~l~~--lp~~~~~l~~L~~L~l~~N~i~~l~~~~~l~~L~~L~l~~N~i~~ 79 (124)
T d1dcea3 2 VLHLAHKDLTVLCHLEQLLLVTHLDLSHNRLRA--LPPALAALRCLEVLQASDNALENVDGVANLPRLQELLLCNNRLQQ 79 (124)
T ss_dssp EEECTTSCCSSCCCGGGGTTCCEEECCSSCCCC--CCGGGGGCTTCCEEECCSSCCCCCGGGTTCSSCCEEECCSSCCCS
T ss_pred EEEcCCCCCCCCcccccCCCCCEEECCCCccCc--chhhhhhhhcccccccccccccccCccccccccCeEECCCCccCC
Confidence 344444444332334445555555555544421 111134445555555544421110113335555555555554210
Q ss_pred CceeeeCCceeEEEeccccccCCCCCcceEEecccccchh--HHHHHHhCCccccee
Q 039643 210 ELESIVAPSLQQLTLVRVIVVATCPNLKKLHLSEIVLEDQ--EFHELISKFPLLEDL 264 (520)
Q Consensus 210 ~~~~i~aP~L~~L~l~~~~~~~~l~~L~~L~L~~~~~~~~--~~~~ll~~l~~L~~L 264 (520)
+ | ....+..+++|+.++++++.+++. ....+...+|+|+.|
T Consensus 80 ----~--~--------~~~~l~~~~~L~~L~l~~N~i~~~~~~~~~l~~~lp~L~~L 122 (124)
T d1dcea3 80 ----S--A--------AIQPLVSCPRLVLLNLQGNSLCQEEGIQERLAEMLPSVSSI 122 (124)
T ss_dssp ----S--S--------TTGGGGGCTTCCEEECTTSGGGGSSSCTTHHHHHCTTCSEE
T ss_pred ----C--C--------CchhhcCCCCCCEEECCCCcCCcCccHHHHHHHHCcCcceE
Confidence 0 0 001234556666666665554321 122344445555544
No 24
>d1m9la_ c.10.3.1 (A:) Outer arm dynein light chain 1 {Green algae (Chlamydomonas reinhardtii) [TaxId: 3055]}
Probab=98.17 E-value=4.7e-08 Score=89.35 Aligned_cols=146 Identities=18% Similarity=0.214 Sum_probs=92.7
Q ss_pred ceEEEEEecCCCCCcccccCcccccCCCccEEEEeccccCCCcccCCCCCCCEEEecceecChHHHHHHHhcCCCcceee
Q 039643 100 VKELHIVVESSPHESAYTLPQAIYSAKLLTTLVLNGCRLDEPLIAINLNSLKNLSLQRVYANEQMVHNLIAECCSLEDLS 179 (520)
Q Consensus 100 VkeL~L~~~~~~~~~~~~LP~~l~~~~sL~~L~L~~c~l~~p~~~~~l~sLk~L~L~~v~~~~~~l~~Lls~CP~LE~L~ 179 (520)
++++++... ......+|.++..+++|++|+|+++.+...+.+.++++|++|+|+++.+.. ++.+...++.|+.|+
T Consensus 25 ~~~~~l~~~---~~~i~~l~~sl~~L~~L~~L~Ls~n~I~~i~~l~~l~~L~~L~Ls~N~i~~--i~~~~~~~~~L~~L~ 99 (198)
T d1m9la_ 25 AEKVELHGM---IPPIEKMDATLSTLKACKHLALSTNNIEKISSLSGMENLRILSLGRNLIKK--IENLDAVADTLEELW 99 (198)
T ss_dssp CSCEECCBC---CTTCCCCHHHHHHTTTCCEEECSEEEESCCCCHHHHTTCCEEECCEEEECS--CSSHHHHHHHCCEEE
T ss_pred cceeeeecc---cCchhhhhhHHhcccccceeECcccCCCCcccccCCccccChhhccccccc--ccccccccccccccc
Confidence 556666543 123446778888899999999999877543457788999999999998732 222344457888888
Q ss_pred eeccCCccee-ccccccccceEEEecccCCCCceeeeCCceeEEEeccccccCCCCCcceEEecccccchh---------
Q 039643 180 LRYTLGLKFF-SVSKAHKLKNMVIVDYSRSSELESIVAPSLQQLTLVRVIVVATCPNLKKLHLSEIVLEDQ--------- 249 (520)
Q Consensus 180 L~~c~~l~~l-~I~~~~~Lk~L~I~~~~~~~~~~~i~aP~L~~L~l~~~~~~~~l~~L~~L~L~~~~~~~~--------- 249 (520)
+.++. +..+ .+.++++|+.|+++++.... + + ....+..+++|+.|+++++.+...
T Consensus 100 l~~N~-i~~l~~~~~l~~L~~L~L~~N~i~~--~----~--------~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~ 164 (198)
T d1m9la_ 100 ISYNQ-IASLSGIEKLVNLRVLYMSNNKITN--W----G--------EIDKLAALDKLEDLLLAGNPLYNDYKENNATSE 164 (198)
T ss_dssp CSEEE-CCCHHHHHHHHHSSEEEESEEECCC--H----H--------HHHHHTTTTTCSEEEECSSHHHHHHCTTTTHHH
T ss_pred ccccc-ccccccccccccccccccccchhcc--c----c--------ccccccCCCccceeecCCCccccCcccccchhh
Confidence 88874 2222 23447788888888775310 0 0 001246677888888876554321
Q ss_pred HHHHHHhCCcccceee
Q 039643 250 EFHELISKFPLLEDLS 265 (520)
Q Consensus 250 ~~~~ll~~l~~L~~L~ 265 (520)
.-..++..+|+|+.|+
T Consensus 165 ~r~~vi~~lp~L~~LD 180 (198)
T d1m9la_ 165 YRIEVVKRLPNLKKLD 180 (198)
T ss_dssp HHHHHHHHCSSCCEES
T ss_pred HHHHHHHHCCCcCEeC
Confidence 1123466777777765
No 25
>d1a9na_ c.10.2.4 (A:) Splicesomal U2A' protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=97.92 E-value=2.1e-06 Score=75.46 Aligned_cols=102 Identities=13% Similarity=0.001 Sum_probs=74.7
Q ss_pred CceEEEEEecCCCCCcccccCcccccCCCccEEEEeccccCCCcccCCCCCCCEEEecceecChHHHHHHHhcCCCccee
Q 039643 99 GVKELHIVVESSPHESAYTLPQAIYSAKLLTTLVLNGCRLDEPLIAINLNSLKNLSLQRVYANEQMVHNLIAECCSLEDL 178 (520)
Q Consensus 99 ~VkeL~L~~~~~~~~~~~~LP~~l~~~~sL~~L~L~~c~l~~p~~~~~l~sLk~L~L~~v~~~~~~l~~Lls~CP~LE~L 178 (520)
++++|+|... ....+|.....++.|++|+|+++.+..-+.+..+++|++|+|+++.+.. ....+..++|.|+.|
T Consensus 19 ~lr~L~L~~n-----~I~~i~~~~~~l~~L~~L~Ls~N~i~~l~~~~~l~~L~~L~ls~N~i~~-l~~~~~~~l~~L~~L 92 (162)
T d1a9na_ 19 RDRELDLRGY-----KIPVIENLGATLDQFDAIDFSDNEIRKLDGFPLLRRLKTLLVNNNRICR-IGEGLDQALPDLTEL 92 (162)
T ss_dssp SCEEEECTTS-----CCCSCCCGGGGTTCCSEEECCSSCCCEECCCCCCSSCCEEECCSSCCCE-ECSCHHHHCTTCCEE
T ss_pred cCcEEECCCC-----CCCccCccccccccCCEEECCCCCCCccCCcccCcchhhhhcccccccC-CCccccccccccccc
Confidence 5788887654 2345565556689999999999977443457889999999999998732 111245678999999
Q ss_pred eeeccCC--cce-eccccccccceEEEeccc
Q 039643 179 SLRYTLG--LKF-FSVSKAHKLKNMVIVDYS 206 (520)
Q Consensus 179 ~L~~c~~--l~~-l~I~~~~~Lk~L~I~~~~ 206 (520)
++.+|.- +.. -.+.++++|+.|++.++.
T Consensus 93 ~L~~N~i~~~~~l~~l~~l~~L~~L~l~~N~ 123 (162)
T d1a9na_ 93 ILTNNSLVELGDLDPLASLKSLTYLCILRNP 123 (162)
T ss_dssp ECCSCCCCCGGGGGGGGGCTTCCEEECCSSG
T ss_pred eeccccccccccccccccccccchhhcCCCc
Confidence 9999852 222 234568999999999986
No 26
>d1z7xw1 c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human (Homo sapiens) [TaxId: 9606]}
Probab=97.90 E-value=2.2e-05 Score=78.55 Aligned_cols=343 Identities=14% Similarity=0.051 Sum_probs=173.9
Q ss_pred HHHHHHH-HhCCceEEEEEecCCCCCcccccCcccccCCCccEEEEeccccCC------Cccc-CCCCCCCEEEecceec
Q 039643 89 DKWIGLA-VGNGVKELHIVVESSPHESAYTLPQAIYSAKLLTTLVLNGCRLDE------PLIA-INLNSLKNLSLQRVYA 160 (520)
Q Consensus 89 ~~Wl~~a-~~~~VkeL~L~~~~~~~~~~~~LP~~l~~~~sL~~L~L~~c~l~~------p~~~-~~l~sLk~L~L~~v~~ 160 (520)
..|.... .-++++.|+|....-.......++..+..+++|++|+|++|.+.. ...+ ....+|++|+|+++.+
T Consensus 17 ~~~~~l~~~l~~l~~L~L~~~~i~~~~~~~l~~~L~~~~~L~~LdLs~N~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~i 96 (460)
T d1z7xw1 17 ARWAELLPLLQQCQVVRLDDCGLTEARCKDISSALRVNPALAELNLRSNELGDVGVHCVLQGLQTPSCKIQKLSLQNCCL 96 (460)
T ss_dssp HHHHHHHHHHTTCSEEEEESSCCCHHHHHHHHHHHHTCTTCCEEECTTCCCHHHHHHHHHHTTCSTTCCCCEEECTTSCC
T ss_pred HHHHHHHHhCCCCCEEEeCCCCCCHHHHHHHHHHHhcCCCCCEEECcCCcCChHHHHHHHHHHhcCCCCCCEEECCCCCc
Confidence 4555543 348899999977521111223566677789999999999986631 1111 1335799999999998
Q ss_pred ChHH---HHHHHhcCCCcceeeeeccCC----cce--------------ec-----------------cccccccceEEE
Q 039643 161 NEQM---VHNLIAECCSLEDLSLRYTLG----LKF--------------FS-----------------VSKAHKLKNMVI 202 (520)
Q Consensus 161 ~~~~---l~~Lls~CP~LE~L~L~~c~~----l~~--------------l~-----------------I~~~~~Lk~L~I 202 (520)
++.. +...+..|+.|++|++.++.- ... .. +...+.++.+.+
T Consensus 97 t~~~~~~l~~~l~~~~~L~~L~L~~N~i~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l 176 (460)
T d1z7xw1 97 TGAGCGVLSSTLRTLPTLQELHLSDNLLGDAGLQLLCEGLLDPQCRLEKLQLEYCSLSAASCEPLASVLRAKPDFKELTV 176 (460)
T ss_dssp BGGGHHHHHHHTTSCTTCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCBGGGHHHHHHHHHHCTTCCEEEC
T ss_pred cccccccccchhhccccccccccccccchhhhhhhhhhcccccccccccccccccccchhhhcccccccccccccccccc
Confidence 5544 445567899999999988741 000 00 011245555555
Q ss_pred ecccCCCCc-------eeeeCCceeEEEeccc-----------cccCCCCCcceEEecccccchh----HHHHHHhCCcc
Q 039643 203 VDYSRSSEL-------ESIVAPSLQQLTLVRV-----------IVVATCPNLKKLHLSEIVLEDQ----EFHELISKFPL 260 (520)
Q Consensus 203 ~~~~~~~~~-------~~i~aP~L~~L~l~~~-----------~~~~~l~~L~~L~L~~~~~~~~----~~~~ll~~l~~ 260 (520)
..+...... ..........+..... ..+...+.++.+.+..+.+... ...........
T Consensus 177 s~~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~~l~~~~n~~~~~~~~~~~~~~~~~~~~ 256 (460)
T d1z7xw1 177 SNNDINEAGVRVLCQGLKDSPCQLEALKLESCGVTSDNCRDLCGIVASKASLRELALGSNKLGDVGMAELCPGLLHPSSR 256 (460)
T ss_dssp CSSBCHHHHHHHHHHHHHHSCCCCCEEECTTSCCBTTHHHHHHHHHHHCTTCCEEECCSSBCHHHHHHHHHHHHTSTTCC
T ss_pred cccccccccccccccccccccccccccccccccccchhhhcccccccccccccccchhhccccccccchhhccccccccc
Confidence 544321000 0001112333333210 0123456677777766554332 22334455667
Q ss_pred cceeecccccccc-c---c---ccccccccEEEeecCCch----h----HHhcCCCCccEeEecccCCCCccccc----c
Q 039643 261 LEDLSVSSSQPLE-R---V---KFSSNLLKRVAFLFCRSL----R----AVDLDTPNLLSFTFESVRIPTISISA----S 321 (520)
Q Consensus 261 L~~L~L~~~~~l~-~---~---~~~f~~L~~L~L~~c~~l----~----~lL~~~P~L~~L~l~~~~~~~~~~~~----l 321 (520)
++.|.++++.... . . -.....++.+.++++.-. . .+....+.|+.+.+..+.+....... .
T Consensus 257 l~~l~l~~n~i~~~~~~~~~~~l~~~~~l~~l~l~~n~i~~~~~~~l~~~l~~~~~~L~~l~l~~~~l~~~~~~~l~~~~ 336 (460)
T d1z7xw1 257 LRTLWIWECGITAKGCGDLCRVLRAKESLKELSLAGNELGDEGARLLCETLLEPGCQLESLWVKSCSFTAACCSHFSSVL 336 (460)
T ss_dssp CCEEECTTSCCCHHHHHHHHHHHHHCTTCCEEECTTCCCHHHHHHHHHHHHTSTTCCCCEEECTTSCCBGGGHHHHHHHH
T ss_pred ccccccccccccccccccccccccccccccccccccccccccccchhhccccccccccccccccccchhhhhhhhccccc
Confidence 7788777765311 0 0 012345677776653221 1 22234557777777766544210000 1
Q ss_pred c-CCCcE-EEEeccccccChhhHHHHHHHHHhccccccceEEEecccccc----ccccccccccccCCCCcccccceEEE
Q 039643 322 H-QCPWN-VFFVHEHDVGDIDNWYLKLKEFLGASNQIENLLINLRSVNIR----QMPFDLEEFKNRSPSLPFQVGNMRLI 395 (520)
Q Consensus 322 ~-~~~L~-v~~~~~~~~g~~~~l~~~~~~~l~n~~~Le~L~i~~~~~~~~----~i~~~L~~~p~asp~l~~~l~~L~l~ 395 (520)
. ...++ +.+..+.+..+ ....+++.+..+.+.|++|.+.. ++... .+.+.+ ...+ .|++|.+.
T Consensus 337 ~~~~~L~~L~Ls~N~i~~~--g~~~l~~~l~~~~~~L~~L~Ls~-n~i~~~~~~~l~~~l-------~~~~-~L~~L~Ls 405 (460)
T d1z7xw1 337 AQNRFLLELQISNNRLEDA--GVRELCQGLGQPGSVLRVLWLAD-CDVSDSSCSSLAATL-------LANH-SLRELDLS 405 (460)
T ss_dssp HHCSSCCEEECCSSBCHHH--HHHHHHHHHTSTTCCCCEEECTT-SCCCHHHHHHHHHHH-------HHCC-CCCEEECC
T ss_pred ccccchhhhheeeecccCc--ccchhhhhhhcccCCCCEEECCC-CCCChHHHHHHHHHH-------hcCC-CCCEEECC
Confidence 1 11232 44444444322 22233444445667788888874 22211 122222 1225 78888887
Q ss_pred EeeecchhhHHHHHHhHhhh-ccCCceecCCCCccchHHHHHHHHHHHhcc
Q 039643 396 VGMEVPIQEYKNLMDGIFWI-CYPKNLYLPKQFNASSQFIEWLLELLWNRN 445 (520)
Q Consensus 396 ~~~~~~~~~~~~~~~~l~~~-~~~~~l~~~~~~~~~~~f~~~~~~~~~~~~ 445 (520)
. ...+......+.+.+-.- +.=+.|.+... ..+.++.+.+-+ +.+++
T Consensus 406 ~-N~i~~~g~~~l~~~l~~~~~~L~~l~l~~~-~~~~~~~~~l~~-l~~~~ 453 (460)
T d1z7xw1 406 N-NCLGDAGILQLVESVRQPGCLLEQLVLYDI-YWSEEMEDRLQA-LEKDK 453 (460)
T ss_dssp S-SSCCHHHHHHHHHHHTSTTCCCCEEECTTC-CCCHHHHHHHHH-HHHHC
T ss_pred C-CcCCHHHHHHHHHHHHhCCCccCEEECCCC-CCCHHHHHHHHH-HHHhC
Confidence 3 443434444555544211 23356666532 335566666555 44443
No 27
>d1xwdc1 c.10.2.7 (C:18-259) Follicle-stimulating hormone receptor {Human (Homo sapiens) [TaxId: 9606]}
Probab=97.86 E-value=2.1e-05 Score=72.65 Aligned_cols=166 Identities=14% Similarity=0.070 Sum_probs=90.2
Q ss_pred CCceEEEEEecCCCCCcccccCcc-cccCCCccEEEEeccccC-C--CcccCCCCCCCEEEeccee-cChHHHHHHHhcC
Q 039643 98 NGVKELHIVVESSPHESAYTLPQA-IYSAKLLTTLVLNGCRLD-E--PLIAINLNSLKNLSLQRVY-ANEQMVHNLIAEC 172 (520)
Q Consensus 98 ~~VkeL~L~~~~~~~~~~~~LP~~-l~~~~sL~~L~L~~c~l~-~--p~~~~~l~sLk~L~L~~v~-~~~~~l~~Lls~C 172 (520)
+++++|++... ....+|.. +..+++|++|+|+++.+. . +..+.+++.++.|.+..+. +.. .....+.++
T Consensus 29 ~~l~~L~Ls~n-----~i~~l~~~~f~~l~~L~~L~ls~n~~~~~i~~~~f~~l~~l~~l~~~~~n~l~~-~~~~~~~~l 102 (242)
T d1xwdc1 29 RNAIELRFVLT-----KLRVIQKGAFSGFGDLEKIEISQNDVLEVIEADVFSNLPKLHEIRIEKANNLLY-INPEAFQNL 102 (242)
T ss_dssp SCCSEEEEESC-----CCCEECTTTTTTCTTCCEEEEESCTTCCEECSSSEESCTTCCEEEEECCTTCCE-ECTTSEECC
T ss_pred CCCCEEECcCC-----cCCccChhHhhccchhhhhhhccccccceeeccccccccccccccccccccccc-ccccccccc
Confidence 58999999764 23467764 456899999999998542 2 3346789999999886542 211 111235789
Q ss_pred CCcceeeeeccCCcceeccccccccceEEEecccCC-CCce---ee--eCCceeEEEeccc------cccCCCCCcceEE
Q 039643 173 CSLEDLSLRYTLGLKFFSVSKAHKLKNMVIVDYSRS-SELE---SI--VAPSLQQLTLVRV------IVVATCPNLKKLH 240 (520)
Q Consensus 173 P~LE~L~L~~c~~l~~l~I~~~~~Lk~L~I~~~~~~-~~~~---~i--~aP~L~~L~l~~~------~~~~~l~~L~~L~ 240 (520)
|.|+.|.+.++............+++.+.+...... ...+ .+ -.+.++.+.+... ....+.+++.++.
T Consensus 103 ~~L~~l~l~~~~l~~~~~~~~~~~l~~l~~~~~~n~~l~~i~~~~~~~~~~~l~~L~l~~n~l~~i~~~~~~~~~l~~~~ 182 (242)
T d1xwdc1 103 PNLQYLLISNTGIKHLPDVHKIHSLQKVLLDIQDNINIHTIERNSFVGLSFESVILWLNKNGIQEIHNCAFNGTQLDELN 182 (242)
T ss_dssp TTCCEEEEESCCCCSCCCCTTTCBSSCEEEEEESCTTCCEECTTSSTTSBSSCEEEECCSSCCCEECTTTTTTCCEEEEE
T ss_pred ccccccccchhhhcccccccccccccccccccccccccccccccccccccccceeeecccccccccccccccchhhhccc
Confidence 999999999985222111222445555544332210 0100 01 1234555554310 1112234444443
Q ss_pred e-cccccchhHHHHHHhCCcccceeeccccc
Q 039643 241 L-SEIVLEDQEFHELISKFPLLEDLSVSSSQ 270 (520)
Q Consensus 241 L-~~~~~~~~~~~~ll~~l~~L~~L~L~~~~ 270 (520)
. .++.++. .....++++++|+.|+|+++.
T Consensus 183 ~l~~n~l~~-l~~~~f~~l~~L~~L~Ls~N~ 212 (242)
T d1xwdc1 183 LSDNNNLEE-LPNDVFHGASGPVILDISRTR 212 (242)
T ss_dssp CTTCTTCCC-CCTTTTTTSCCCSEEECTTSC
T ss_pred ccccccccc-ccHHHhcCCCCCCEEECCCCc
Confidence 2 3344432 122345667777777776655
No 28
>d1dcea3 c.10.2.2 (A:444-567) Rab geranylgeranyltransferase alpha-subunit, C-terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=97.77 E-value=9.2e-06 Score=67.86 Aligned_cols=82 Identities=21% Similarity=0.138 Sum_probs=50.9
Q ss_pred cccCCCccEEEEeccccCC-CcccCCCCCCCEEEecceecChHHHHHHHhcCCCcceeeeeccCC--cce-ecccccccc
Q 039643 122 IYSAKLLTTLVLNGCRLDE-PLIAINLNSLKNLSLQRVYANEQMVHNLIAECCSLEDLSLRYTLG--LKF-FSVSKAHKL 197 (520)
Q Consensus 122 l~~~~sL~~L~L~~c~l~~-p~~~~~l~sLk~L~L~~v~~~~~~l~~Lls~CP~LE~L~L~~c~~--l~~-l~I~~~~~L 197 (520)
+..+++|++|+|+++.+.. |+.+..+++|++|+++++.+.. ++. +..+|.|+.|++.++.- +.. ..+..+++|
T Consensus 16 l~~l~~L~~L~ls~N~l~~lp~~~~~l~~L~~L~l~~N~i~~--l~~-~~~l~~L~~L~l~~N~i~~~~~~~~l~~~~~L 92 (124)
T d1dcea3 16 LEQLLLVTHLDLSHNRLRALPPALAALRCLEVLQASDNALEN--VDG-VANLPRLQELLLCNNRLQQSAAIQPLVSCPRL 92 (124)
T ss_dssp GGGGTTCCEEECCSSCCCCCCGGGGGCTTCCEEECCSSCCCC--CGG-GTTCSSCCEEECCSSCCCSSSTTGGGGGCTTC
T ss_pred cccCCCCCEEECCCCccCcchhhhhhhhcccccccccccccc--cCc-cccccccCeEECCCCccCCCCCchhhcCCCCC
Confidence 5566777777777776633 5556677777777777776632 111 45677777777777642 211 123446777
Q ss_pred ceEEEeccc
Q 039643 198 KNMVIVDYS 206 (520)
Q Consensus 198 k~L~I~~~~ 206 (520)
+.|+++++.
T Consensus 93 ~~L~l~~N~ 101 (124)
T d1dcea3 93 VLLNLQGNS 101 (124)
T ss_dssp CEEECTTSG
T ss_pred CEEECCCCc
Confidence 777777654
No 29
>d1jl5a_ c.10.2.6 (A:) Leucine rich effector protein YopM {Yersinia pestis [TaxId: 632]}
Probab=97.73 E-value=7.5e-05 Score=71.95 Aligned_cols=74 Identities=14% Similarity=0.130 Sum_probs=38.6
Q ss_pred CCceEEEEEecCCCCCcccccCcccccCCCccEEEEeccccCCCcccCCCCCCCEEEecceecChHHHHHHHhcCCCcce
Q 039643 98 NGVKELHIVVESSPHESAYTLPQAIYSAKLLTTLVLNGCRLDEPLIAINLNSLKNLSLQRVYANEQMVHNLIAECCSLED 177 (520)
Q Consensus 98 ~~VkeL~L~~~~~~~~~~~~LP~~l~~~~sL~~L~L~~c~l~~p~~~~~l~sLk~L~L~~v~~~~~~l~~Lls~CP~LE~ 177 (520)
.++++|++... ....+|.. ..+|+.|++.++.+..-+ .-.++|++|+|+++.+.. ++. .+.++.|+.
T Consensus 58 ~~L~~L~Ls~N-----~l~~lp~~---~~~L~~L~l~~n~l~~l~--~lp~~L~~L~L~~n~l~~--lp~-~~~l~~L~~ 124 (353)
T d1jl5a_ 58 PHLESLVASCN-----SLTELPEL---PQSLKSLLVDNNNLKALS--DLPPLLEYLGVSNNQLEK--LPE-LQNSSFLKI 124 (353)
T ss_dssp TTCSEEECCSS-----CCSSCCCC---CTTCCEEECCSSCCSCCC--SCCTTCCEEECCSSCCSS--CCC-CTTCTTCCE
T ss_pred CCCCEEECCCC-----CCcccccc---hhhhhhhhhhhcccchhh--hhcccccccccccccccc--ccc-hhhhcccee
Confidence 35777766543 22355544 246777777766543211 111357777777666521 111 244566777
Q ss_pred eeeeccC
Q 039643 178 LSLRYTL 184 (520)
Q Consensus 178 L~L~~c~ 184 (520)
|++.++.
T Consensus 125 L~l~~~~ 131 (353)
T d1jl5a_ 125 IDVDNNS 131 (353)
T ss_dssp EECCSSC
T ss_pred ecccccc
Confidence 7666553
No 30
>d1w8aa_ c.10.2.7 (A:) Slit {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Probab=97.63 E-value=1.1e-05 Score=72.26 Aligned_cols=115 Identities=20% Similarity=0.169 Sum_probs=64.6
Q ss_pred ccccCcccccCCCccEEEEeccccC--C-CcccCCCCCCCEEEecceecChHHHHHHHhcCCCcceeeeeccCC--ccee
Q 039643 115 AYTLPQAIYSAKLLTTLVLNGCRLD--E-PLIAINLNSLKNLSLQRVYANEQMVHNLIAECCSLEDLSLRYTLG--LKFF 189 (520)
Q Consensus 115 ~~~LP~~l~~~~sL~~L~L~~c~l~--~-p~~~~~l~sLk~L~L~~v~~~~~~l~~Lls~CP~LE~L~L~~c~~--l~~l 189 (520)
...+|..+. +++++|+|+++.+. . +..+.++++|+.|+|.++.+.. .....+.+.+.|+.|+|+++.- +..-
T Consensus 20 L~~iP~~lp--~~l~~L~Ls~N~i~~~~~~~~f~~l~~L~~L~L~~N~i~~-~~~~~~~~~~~L~~L~Ls~N~l~~l~~~ 96 (192)
T d1w8aa_ 20 LKEIPRDIP--LHTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTG-IEPNAFEGASHIQELQLGENKIKEISNK 96 (192)
T ss_dssp CSSCCSCCC--TTCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCC-BCTTTTTTCTTCCEEECCSCCCCEECSS
T ss_pred cCccCCCCC--CCCCEEEeCCCCCcccccccccCCCceEeeeecccccccc-ccccccccccccceeeeccccccccCHH
Confidence 345666654 57788888887662 2 3345677888888887776521 1112244567777777776642 1111
Q ss_pred ccccccccceEEEecccCCCCceeeeCCceeEEEeccccccCCCCCcceEEecccccc
Q 039643 190 SVSKAHKLKNMVIVDYSRSSELESIVAPSLQQLTLVRVIVVATCPNLKKLHLSEIVLE 247 (520)
Q Consensus 190 ~I~~~~~Lk~L~I~~~~~~~~~~~i~aP~L~~L~l~~~~~~~~l~~L~~L~L~~~~~~ 247 (520)
.+.++++|+.|+++++... .+. +..|..+++|++++|+++.+.
T Consensus 97 ~F~~l~~L~~L~L~~N~l~----~i~-----------~~~f~~l~~L~~l~L~~N~~~ 139 (192)
T d1w8aa_ 97 MFLGLHQLKTLNLYDNQIS----CVM-----------PGSFEHLNSLTSLNLASNPFN 139 (192)
T ss_dssp SSTTCTTCCEEECCSSCCC----EEC-----------TTSSTTCTTCCEEECTTCCBC
T ss_pred HHhCCCcccccccCCcccc----ccC-----------HHHhcCCcccccccccccccc
Confidence 2344666666666666421 010 123456667777777665543
No 31
>d1w8aa_ c.10.2.7 (A:) Slit {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Probab=97.59 E-value=2.9e-05 Score=69.47 Aligned_cols=126 Identities=16% Similarity=0.060 Sum_probs=85.8
Q ss_pred ccEEEEeccccC-CCcccCCCCCCCEEEecceecChHHHHHHHhcCCCcceeeeeccCCc--ceeccccccccceEEEec
Q 039643 128 LTTLVLNGCRLD-EPLIAINLNSLKNLSLQRVYANEQMVHNLIAECCSLEDLSLRYTLGL--KFFSVSKAHKLKNMVIVD 204 (520)
Q Consensus 128 L~~L~L~~c~l~-~p~~~~~l~sLk~L~L~~v~~~~~~l~~Lls~CP~LE~L~L~~c~~l--~~l~I~~~~~Lk~L~I~~ 204 (520)
.++++.++..+. +|+.. .+++++|+|+++.++...-...+.+.+.|+.|+|.++... ..-.+.+.++|+.|++++
T Consensus 10 ~~~v~Cs~~~L~~iP~~l--p~~l~~L~Ls~N~i~~~~~~~~f~~l~~L~~L~L~~N~i~~~~~~~~~~~~~L~~L~Ls~ 87 (192)
T d1w8aa_ 10 GTTVDCTGRGLKEIPRDI--PLHTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGE 87 (192)
T ss_dssp TTEEECTTSCCSSCCSCC--CTTCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCS
T ss_pred CCEEEEeCCCcCccCCCC--CCCCCEEEeCCCCCcccccccccCCCceEeeeeccccccccccccccccccccceeeecc
Confidence 356666666553 35432 3789999999987732222223567899999999887532 222344578999999998
Q ss_pred ccCCCCceeeeCCceeEEEeccccccCCCCCcceEEecccccchhHHHHHHhCCcccceeecccccc
Q 039643 205 YSRSSELESIVAPSLQQLTLVRVIVVATCPNLKKLHLSEIVLEDQEFHELISKFPLLEDLSVSSSQP 271 (520)
Q Consensus 205 ~~~~~~~~~i~aP~L~~L~l~~~~~~~~l~~L~~L~L~~~~~~~~~~~~ll~~l~~L~~L~L~~~~~ 271 (520)
+... .+. +..|.++++|++|+|+++.++. .....+.++++|+.|.|++++.
T Consensus 88 N~l~----~l~-----------~~~F~~l~~L~~L~L~~N~l~~-i~~~~f~~l~~L~~l~L~~N~~ 138 (192)
T d1w8aa_ 88 NKIK----EIS-----------NKMFLGLHQLKTLNLYDNQISC-VMPGSFEHLNSLTSLNLASNPF 138 (192)
T ss_dssp CCCC----EEC-----------SSSSTTCTTCCEEECCSSCCCE-ECTTSSTTCTTCCEEECTTCCB
T ss_pred cccc----ccC-----------HHHHhCCCcccccccCCccccc-cCHHHhcCCccccccccccccc
Confidence 8631 111 2346789999999999888764 2335678899999999988764
No 32
>d1jl5a_ c.10.2.6 (A:) Leucine rich effector protein YopM {Yersinia pestis [TaxId: 632]}
Probab=97.50 E-value=0.00048 Score=65.98 Aligned_cols=132 Identities=20% Similarity=0.152 Sum_probs=85.3
Q ss_pred HHhCCceEEEEEecCCCCCcccccCcccccCCCccEEEEeccccCC-CcccCCCCCCCEEEecceecChHHHHHHHhcC-
Q 039643 95 AVGNGVKELHIVVESSPHESAYTLPQAIYSAKLLTTLVLNGCRLDE-PLIAINLNSLKNLSLQRVYANEQMVHNLIAEC- 172 (520)
Q Consensus 95 a~~~~VkeL~L~~~~~~~~~~~~LP~~l~~~~sL~~L~L~~c~l~~-p~~~~~l~sLk~L~L~~v~~~~~~l~~Lls~C- 172 (520)
+...++++|++... ....+|+. .++|++|+|+++.+.. |. .+.+|+.|++.++.++. +...
T Consensus 35 c~~~~l~~LdLs~~-----~L~~lp~~---~~~L~~L~Ls~N~l~~lp~---~~~~L~~L~l~~n~l~~------l~~lp 97 (353)
T d1jl5a_ 35 CLDRQAHELELNNL-----GLSSLPEL---PPHLESLVASCNSLTELPE---LPQSLKSLLVDNNNLKA------LSDLP 97 (353)
T ss_dssp HHHHTCSEEECTTS-----CCSCCCSC---CTTCSEEECCSSCCSSCCC---CCTTCCEEECCSSCCSC------CCSCC
T ss_pred HHHcCCCEEEeCCC-----CCCCCCCC---CCCCCEEECCCCCCccccc---chhhhhhhhhhhcccch------hhhhc
Confidence 34468899988653 23467764 4689999999987754 43 46799999999887632 2233
Q ss_pred CCcceeeeeccCCcceeccccccccceEEEecccCCCCceeeeCCceeEEEec-----cccccCCCCCcceEEecccc
Q 039643 173 CSLEDLSLRYTLGLKFFSVSKAHKLKNMVIVDYSRSSELESIVAPSLQQLTLV-----RVIVVATCPNLKKLHLSEIV 245 (520)
Q Consensus 173 P~LE~L~L~~c~~l~~l~I~~~~~Lk~L~I~~~~~~~~~~~i~aP~L~~L~l~-----~~~~~~~l~~L~~L~L~~~~ 245 (520)
+.|+.|++.++.-..--.+..+++|+.|++.++... ......+.+..+.+. ....+..++.++.+.+..+.
T Consensus 98 ~~L~~L~L~~n~l~~lp~~~~l~~L~~L~l~~~~~~--~~~~~~~~l~~l~~~~~~~~~~~~l~~l~~l~~L~l~~n~ 173 (353)
T d1jl5a_ 98 PLLEYLGVSNNQLEKLPELQNSSFLKIIDVDNNSLK--KLPDLPPSLEFIAAGNNQLEELPELQNLPFLTAIYADNNS 173 (353)
T ss_dssp TTCCEEECCSSCCSSCCCCTTCTTCCEEECCSSCCS--CCCCCCTTCCEEECCSSCCSSCCCCTTCTTCCEEECCSSC
T ss_pred cccccccccccccccccchhhhccceeecccccccc--ccccccccccchhhccccccccccccccccceeccccccc
Confidence 469999999885221112344789999999887632 122224556666653 12335567777777776543
No 33
>d1m9la_ c.10.3.1 (A:) Outer arm dynein light chain 1 {Green algae (Chlamydomonas reinhardtii) [TaxId: 3055]}
Probab=97.20 E-value=3.3e-05 Score=69.82 Aligned_cols=122 Identities=19% Similarity=0.193 Sum_probs=76.7
Q ss_pred ccEEEEecc--ccC-CCcccCCCCCCCEEEecceecChHHHHHHHhcCCCcceeeeeccCCcceec--cccccccceEEE
Q 039643 128 LTTLVLNGC--RLD-EPLIAINLNSLKNLSLQRVYANEQMVHNLIAECCSLEDLSLRYTLGLKFFS--VSKAHKLKNMVI 202 (520)
Q Consensus 128 L~~L~L~~c--~l~-~p~~~~~l~sLk~L~L~~v~~~~~~l~~Lls~CP~LE~L~L~~c~~l~~l~--I~~~~~Lk~L~I 202 (520)
++.+.+.+. .+. .+..+..+++|+.|+|+++.+.+ ++. ++++++|+.|+|++|. +..+. ....++|+.|++
T Consensus 25 ~~~~~l~~~~~~i~~l~~sl~~L~~L~~L~Ls~n~I~~--i~~-l~~l~~L~~L~Ls~N~-i~~i~~~~~~~~~L~~L~l 100 (198)
T d1m9la_ 25 AEKVELHGMIPPIEKMDATLSTLKACKHLALSTNNIEK--ISS-LSGMENLRILSLGRNL-IKKIENLDAVADTLEELWI 100 (198)
T ss_dssp CSCEECCBCCTTCCCCHHHHHHTTTCCEEECSEEEESC--CCC-HHHHTTCCEEECCEEE-ECSCSSHHHHHHHCCEEEC
T ss_pred cceeeeecccCchhhhhhHHhcccccceeECcccCCCC--ccc-ccCCccccChhhcccc-ccccccccccccccccccc
Confidence 444555542 221 23456778888999998887732 111 4567888888888874 22111 112456777777
Q ss_pred ecccCCCCceeeeCCceeEEEeccccccCCCCCcceEEecccccchhHHHHHHhCCcccceeeccccc
Q 039643 203 VDYSRSSELESIVAPSLQQLTLVRVIVVATCPNLKKLHLSEIVLEDQEFHELISKFPLLEDLSVSSSQ 270 (520)
Q Consensus 203 ~~~~~~~~~~~i~aP~L~~L~l~~~~~~~~l~~L~~L~L~~~~~~~~~~~~ll~~l~~L~~L~L~~~~ 270 (520)
.++... . ...+..+++|+.|+++++.++.-.....++++++|+.|.+++++
T Consensus 101 ~~N~i~--~---------------l~~~~~l~~L~~L~L~~N~i~~~~~~~~l~~l~~L~~L~L~~N~ 151 (198)
T d1m9la_ 101 SYNQIA--S---------------LSGIEKLVNLRVLYMSNNKITNWGEIDKLAALDKLEDLLLAGNP 151 (198)
T ss_dssp SEEECC--C---------------HHHHHHHHHSSEEEESEEECCCHHHHHHHTTTTTCSEEEECSSH
T ss_pred cccccc--c---------------cccccccccccccccccchhccccccccccCCCccceeecCCCc
Confidence 776521 0 11245678899999988887653223457889999999998876
No 34
>d1z7xw1 c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human (Homo sapiens) [TaxId: 9606]}
Probab=96.39 E-value=0.00031 Score=69.85 Aligned_cols=118 Identities=18% Similarity=0.205 Sum_probs=75.2
Q ss_pred CCccEEEEeccccCC---CcccCCCCCCCEEEecceecChHHHH---HHHhcCCCcceeeeeccCC----cceec--c-c
Q 039643 126 KLLTTLVLNGCRLDE---PLIAINLNSLKNLSLQRVYANEQMVH---NLIAECCSLEDLSLRYTLG----LKFFS--V-S 192 (520)
Q Consensus 126 ~sL~~L~L~~c~l~~---p~~~~~l~sLk~L~L~~v~~~~~~l~---~Lls~CP~LE~L~L~~c~~----l~~l~--I-~ 192 (520)
..|++|++++..+.. ..-+..+++||+|.|.+|.+++..+. ..+..||.|++|+|+++.- +..+. + .
T Consensus 2 ~~l~~ld~~~~~i~~~~~~~l~~~l~~l~~L~L~~~~i~~~~~~~l~~~L~~~~~L~~LdLs~N~i~~~~~~~l~~~l~~ 81 (460)
T d1z7xw1 2 LDIQSLDIQCEELSDARWAELLPLLQQCQVVRLDDCGLTEARCKDISSALRVNPALAELNLRSNELGDVGVHCVLQGLQT 81 (460)
T ss_dssp EEEEEEEEESCCCCHHHHHHHHHHHTTCSEEEEESSCCCHHHHHHHHHHHHTCTTCCEEECTTCCCHHHHHHHHHHTTCS
T ss_pred CCCCEEEeeCCcCChHHHHHHHHhCCCCCEEEeCCCCCCHHHHHHHHHHHhcCCCCCEEECcCCcCChHHHHHHHHHHhc
Confidence 368899998876632 22355678999999999988665544 4568899999999988752 11110 0 1
Q ss_pred cccccceEEEecccCCCCceeeeCCceeEEEeccccccCCCCCcceEEecccccchhHHHHH
Q 039643 193 KAHKLKNMVIVDYSRSSELESIVAPSLQQLTLVRVIVVATCPNLKKLHLSEIVLEDQEFHEL 254 (520)
Q Consensus 193 ~~~~Lk~L~I~~~~~~~~~~~i~aP~L~~L~l~~~~~~~~l~~L~~L~L~~~~~~~~~~~~l 254 (520)
...+|++|++++|......... + ...+..+++|++++++++.+++..+..+
T Consensus 82 ~~~~L~~L~L~~n~it~~~~~~----l-------~~~l~~~~~L~~L~L~~N~i~~~~~~~l 132 (460)
T d1z7xw1 82 PSCKIQKLSLQNCCLTGAGCGV----L-------SSTLRTLPTLQELHLSDNLLGDAGLQLL 132 (460)
T ss_dssp TTCCCCEEECTTSCCBGGGHHH----H-------HHHTTSCTTCCEEECCSSBCHHHHHHHH
T ss_pred CCCCCCEEECCCCCcccccccc----c-------cchhhccccccccccccccchhhhhhhh
Confidence 1357888888887631111000 0 1124678899999999888766544333
No 35
>d2ifga3 c.10.2.7 (A:36-191) High affinity nerve growth factor receptor, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=95.95 E-value=0.0026 Score=54.40 Aligned_cols=37 Identities=8% Similarity=-0.053 Sum_probs=17.6
Q ss_pred hcCCCcceeeeeccCC--cceeccccccccceEEEeccc
Q 039643 170 AECCSLEDLSLRYTLG--LKFFSVSKAHKLKNMVIVDYS 206 (520)
Q Consensus 170 s~CP~LE~L~L~~c~~--l~~l~I~~~~~Lk~L~I~~~~ 206 (520)
.+.+.|+.|+|+++.- +..-.+.++++|++|+++++.
T Consensus 53 ~~l~~L~~L~Ls~N~l~~i~~~~f~~l~~L~~L~Ls~N~ 91 (156)
T d2ifga3 53 RGLGELRNLTIVKSGLRFVAPDAFHFTPRLSRLNLSFNA 91 (156)
T ss_dssp CSCCCCSEEECCSSCCCEECTTGGGSCSCCCEEECCSSC
T ss_pred ccccccCcceeeccccCCcccccccccccccceeccCCC
Confidence 3445555555554431 111123345666666666665
No 36
>d2ifga3 c.10.2.7 (A:36-191) High affinity nerve growth factor receptor, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=95.93 E-value=0.0026 Score=54.50 Aligned_cols=68 Identities=18% Similarity=0.139 Sum_probs=44.5
Q ss_pred cccCcccccCCCccEEEEecc-ccCC--CcccCCCCCCCEEEecceecChHHHHHHHhcCCCcceeeeeccC
Q 039643 116 YTLPQAIYSAKLLTTLVLNGC-RLDE--PLIAINLNSLKNLSLQRVYANEQMVHNLIAECCSLEDLSLRYTL 184 (520)
Q Consensus 116 ~~LP~~l~~~~sL~~L~L~~c-~l~~--p~~~~~l~sLk~L~L~~v~~~~~~l~~Lls~CP~LE~L~L~~c~ 184 (520)
...|..+...++|++|.|.++ .+.. +..+.++++|+.|+|+++.+.. .-...+.+.+.|+.|+|+++.
T Consensus 21 ~~~p~~l~~l~~l~~L~l~~n~~l~~i~~~~f~~l~~L~~L~Ls~N~l~~-i~~~~f~~l~~L~~L~Ls~N~ 91 (156)
T d2ifga3 21 LDSLHHLPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRF-VAPDAFHFTPRLSRLNLSFNA 91 (156)
T ss_dssp CTTTTTSCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCE-ECTTGGGSCSCCCEEECCSSC
T ss_pred ccCcccccCccccCeeecCCCccccccCchhhccccccCcceeeccccCC-cccccccccccccceeccCCC
Confidence 455666667778888888764 3532 3456778888888888776621 001234667888888887765
No 37
>d1pgva_ c.10.1.1 (A:) Tropomodulin C-terminal domain {nematode (Caenorhabditis elegans) [TaxId: 6239]}
Probab=95.43 E-value=0.0021 Score=55.73 Aligned_cols=96 Identities=9% Similarity=0.198 Sum_probs=48.0
Q ss_pred HHHHHHHhcCCCcceeeeeccCCcce-----e--ccccccccceEEEecccCCCCceeeeCCceeEEEeccccccCCCCC
Q 039643 163 QMVHNLIAECCSLEDLSLRYTLGLKF-----F--SVSKAHKLKNMVIVDYSRSSELESIVAPSLQQLTLVRVIVVATCPN 235 (520)
Q Consensus 163 ~~l~~Lls~CP~LE~L~L~~c~~l~~-----l--~I~~~~~Lk~L~I~~~~~~~~~~~i~aP~L~~L~l~~~~~~~~l~~ 235 (520)
+.++++..++|.|++|+|.++..+.. + .+...++|++|++++|........ .+ ...+...+.
T Consensus 5 ~~l~~l~~n~~~L~~L~L~~~~~i~~~~~~~l~~~L~~n~~L~~L~Ls~n~l~~~~~~----~l-------a~~L~~n~~ 73 (167)
T d1pgva_ 5 SCINRLREDDTDLKEVNINNMKRVSKERIRSLIEAACNSKHIEKFSLANTAISDSEAR----GL-------IELIETSPS 73 (167)
T ss_dssp HHHHHHHTTCSSCCEEECTTCCSSCHHHHHHHHHHHTTCSCCCEEECTTSCCBHHHHT----TH-------HHHHHHCSS
T ss_pred HHHHHHHhCCCCCcEEEeCCCCCCCHHHHHHHHHHHhhCCccceeeccccccchhHHH----HH-------hhhhhhccc
Confidence 45666666677777777765532211 1 122245666666666542110000 00 001234556
Q ss_pred cceEEecccccchhHHH---HHHhCCcccceeecccc
Q 039643 236 LKKLHLSEIVLEDQEFH---ELISKFPLLEDLSVSSS 269 (520)
Q Consensus 236 L~~L~L~~~~~~~~~~~---~ll~~l~~L~~L~L~~~ 269 (520)
|++|+|+++.+++.... ..+...++|+.|.|+++
T Consensus 74 L~~L~L~~n~i~~~g~~~l~~aL~~n~sL~~L~l~~n 110 (167)
T d1pgva_ 74 LRVLNVESNFLTPELLARLLRSTLVTQSIVEFKADNQ 110 (167)
T ss_dssp CCEEECCSSBCCHHHHHHHHHHTTTTCCCSEEECCCC
T ss_pred ccceeeehhhcchHHHHHHHHHHHhCCcCCEEECCCC
Confidence 77777777666654433 33444556666666554
No 38
>d1pgva_ c.10.1.1 (A:) Tropomodulin C-terminal domain {nematode (Caenorhabditis elegans) [TaxId: 6239]}
Probab=94.39 E-value=0.018 Score=49.39 Aligned_cols=112 Identities=14% Similarity=0.156 Sum_probs=54.9
Q ss_pred CCCCCEEEeccee-cChHHHHHH---HhcCCCcceeeeeccCC----ccee--ccccccccceEEEecccCCCCceeeeC
Q 039643 147 LNSLKNLSLQRVY-ANEQMVHNL---IAECCSLEDLSLRYTLG----LKFF--SVSKAHKLKNMVIVDYSRSSELESIVA 216 (520)
Q Consensus 147 l~sLk~L~L~~v~-~~~~~l~~L---ls~CP~LE~L~L~~c~~----l~~l--~I~~~~~Lk~L~I~~~~~~~~~~~i~a 216 (520)
.|.|++|+|+++. ++++.+..+ +..++.|+.|+|++|.. ...+ .+...++|+.|++++|.........
T Consensus 14 ~~~L~~L~L~~~~~i~~~~~~~l~~~L~~n~~L~~L~Ls~n~l~~~~~~~la~~L~~n~~L~~L~L~~n~i~~~g~~~-- 91 (167)
T d1pgva_ 14 DTDLKEVNINNMKRVSKERIRSLIEAACNSKHIEKFSLANTAISDSEARGLIELIETSPSLRVLNVESNFLTPELLAR-- 91 (167)
T ss_dssp CSSCCEEECTTCCSSCHHHHHHHHHHHTTCSCCCEEECTTSCCBHHHHTTHHHHHHHCSSCCEEECCSSBCCHHHHHH--
T ss_pred CCCCcEEEeCCCCCCCHHHHHHHHHHHhhCCccceeeccccccchhHHHHHhhhhhhcccccceeeehhhcchHHHHH--
Confidence 4556666666542 444443333 44566666666666631 1111 1222456666666666532110000
Q ss_pred CceeEEEeccccccCCCCCcceEEecccc---cchh---HHHHHHhCCcccceeecccc
Q 039643 217 PSLQQLTLVRVIVVATCPNLKKLHLSEIV---LEDQ---EFHELISKFPLLEDLSVSSS 269 (520)
Q Consensus 217 P~L~~L~l~~~~~~~~l~~L~~L~L~~~~---~~~~---~~~~ll~~l~~L~~L~L~~~ 269 (520)
| ...+...++|++|+++++. ++.. .+...+...++|+.|.++..
T Consensus 92 --l-------~~aL~~n~sL~~L~l~~n~~~~~g~~~~~~l~~~L~~n~sL~~l~l~~~ 141 (167)
T d1pgva_ 92 --L-------LRSTLVTQSIVEFKADNQRQSVLGNQVEMDMMMAIEENESLLRVGISFA 141 (167)
T ss_dssp --H-------HHHTTTTCCCSEEECCCCSSCCCCHHHHHHHHHHHHHCSSCCEEECCCC
T ss_pred --H-------HHHHHhCCcCCEEECCCCcCCCccHHHHHHHHHHHHhCCCccEeeCcCC
Confidence 0 0123445666777765432 2222 24556666777777777654
No 39
>d1io0a_ c.10.1.1 (A:) Tropomodulin C-terminal domain {Chicken (Gallus gallus) [TaxId: 9031]}
Probab=94.16 E-value=0.0082 Score=51.47 Aligned_cols=15 Identities=20% Similarity=0.348 Sum_probs=7.9
Q ss_pred HHhcCCCCccEeEec
Q 039643 295 AVDLDTPNLLSFTFE 309 (520)
Q Consensus 295 ~lL~~~P~L~~L~l~ 309 (520)
..+...++|+.|+++
T Consensus 126 ~~L~~n~~L~~L~l~ 140 (166)
T d1io0a_ 126 NMLEKNTTLLKFGYH 140 (166)
T ss_dssp HHHHHCSSCCEEECC
T ss_pred HHHHhCCCcCEEeCc
Confidence 344455566666554
No 40
>d1koha1 c.10.2.3 (A:201-362) mRNA export factor tap {Human (Homo sapiens) [TaxId: 9606]}
Probab=93.25 E-value=0.0081 Score=51.49 Aligned_cols=57 Identities=26% Similarity=0.218 Sum_probs=26.2
Q ss_pred CCCccEEEEeccccCC----CcccCCCCCCCEEEecceec-ChHHHHHHHhcCCCcceeeeecc
Q 039643 125 AKLLTTLVLNGCRLDE----PLIAINLNSLKNLSLQRVYA-NEQMVHNLIAECCSLEDLSLRYT 183 (520)
Q Consensus 125 ~~sL~~L~L~~c~l~~----p~~~~~l~sLk~L~L~~v~~-~~~~l~~Lls~CP~LE~L~L~~c 183 (520)
+++|++|+|++|.+.. +..+..+++|+.|+|+++.+ +-..+..+ +.+.|+.|++.++
T Consensus 64 ~~~L~~L~Ls~N~i~~l~~~~~~~~~l~~L~~L~Ls~N~i~~l~~l~~l--~~~~L~~L~L~~N 125 (162)
T d1koha1 64 IPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSERELDKI--KGLKLEELWLDGN 125 (162)
T ss_dssp CTTCCCCCCCSSCCCCCSGGGTHHHHSTTCCCCCCTTSCCCCGGGHHHH--TTCCCSSCCCTTS
T ss_pred CCCCCEeeCCCccccCCchhHHHHhhCCcccccccccCccccchhhhhh--hccccceeecCCC
Confidence 4555556665554422 11123455555555555555 22233221 2234555555554
No 41
>d1io0a_ c.10.1.1 (A:) Tropomodulin C-terminal domain {Chicken (Gallus gallus) [TaxId: 9031]}
Probab=93.21 E-value=0.04 Score=46.83 Aligned_cols=114 Identities=14% Similarity=0.102 Sum_probs=55.3
Q ss_pred CCCCCCEEEecce-ecChHHHHHH---HhcCCCcceeeeeccCC----ccee--ccccccccceEEEecccCCCCceeee
Q 039643 146 NLNSLKNLSLQRV-YANEQMVHNL---IAECCSLEDLSLRYTLG----LKFF--SVSKAHKLKNMVIVDYSRSSELESIV 215 (520)
Q Consensus 146 ~l~sLk~L~L~~v-~~~~~~l~~L---ls~CP~LE~L~L~~c~~----l~~l--~I~~~~~Lk~L~I~~~~~~~~~~~i~ 215 (520)
+-|.|++|+|+++ .+++..+..+ +..++.|++|+|++|.- ...+ .+...++|+.+++.++....+....
T Consensus 15 ~~~~L~~L~L~~~~~i~~~~~~~l~~al~~n~~L~~L~Ls~n~l~~~~~~~L~~~l~~~~~l~~l~l~~~~~~~~g~~~- 93 (166)
T d1io0a_ 15 NDPDLEEVNLNNIMNIPVPTLKACAEALKTNTYVKKFSIVGTRSNDPVAFALAEMLKVNNTLKSLNVESNFISGSGILA- 93 (166)
T ss_dssp TCTTCCEEECTTCTTCCHHHHHHHHHHHTTCCSCCEEECTTSCCCHHHHHHHHHHHHHCSSCCEEECCSSCCCHHHHHH-
T ss_pred cCCCCcEEEcCCCCCCCHHHHHHHHHHHhcCCccCeeeccCCcccHHHHHHHHHHHhhcccchhhhhccccccchhHHH-
Confidence 3456666666653 3444444333 33566666666666631 0000 1122456666666555421110000
Q ss_pred CCceeEEEeccccccCCCCCcceEEec--ccccchh---HHHHHHhCCcccceeeccccc
Q 039643 216 APSLQQLTLVRVIVVATCPNLKKLHLS--EIVLEDQ---EFHELISKFPLLEDLSVSSSQ 270 (520)
Q Consensus 216 aP~L~~L~l~~~~~~~~l~~L~~L~L~--~~~~~~~---~~~~ll~~l~~L~~L~L~~~~ 270 (520)
-...+...++|+.++|+ .+.+++. .+...+...++|+.|.++...
T Consensus 94 ----------l~~~l~~~~~L~~l~L~l~~n~i~~~~~~~La~~L~~n~~L~~L~l~~~~ 143 (166)
T d1io0a_ 94 ----------LVEALQSNTSLIELRIDNQSQPLGNNVEMEIANMLEKNTTLLKFGYHFTQ 143 (166)
T ss_dssp ----------HHHGGGGCSSCCEEECCCCSSCCCHHHHHHHHHHHHHCSSCCEEECCCSS
T ss_pred ----------HHHHHHhCccccEEeeccCCCcCcHHHHHHHHHHHHhCCCcCEEeCcCCC
Confidence 00123455667666654 3444443 244556677778888776543
No 42
>d1koha1 c.10.2.3 (A:201-362) mRNA export factor tap {Human (Homo sapiens) [TaxId: 9606]}
Probab=91.88 E-value=0.017 Score=49.39 Aligned_cols=13 Identities=31% Similarity=0.465 Sum_probs=10.1
Q ss_pred HHhcCCCCccEeE
Q 039643 295 AVDLDTPNLLSFT 307 (520)
Q Consensus 295 ~lL~~~P~L~~L~ 307 (520)
.++..+|+|+.|+
T Consensus 140 ~i~~~~P~L~~LD 152 (162)
T d1koha1 140 AIRERFPKLLRLD 152 (162)
T ss_dssp HHHTTSTTCCEET
T ss_pred HHHHHCCCCCEEC
Confidence 5667889998775
No 43
>d1fs1a1 a.158.1.1 (A:109-149) Skp2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=40.62 E-value=2.7 Score=26.24 Aligned_cols=20 Identities=15% Similarity=0.169 Sum_probs=16.6
Q ss_pred cccceeeecccCchhHHHhH
Q 039643 6 ELQIMDRISELPTFWKEKDE 25 (520)
Q Consensus 6 ~~~~AvrTsvLSkRWr~lW~ 25 (520)
+.+|-+|.+.+||||+++-.
T Consensus 17 ~~~dl~~~~~Vcr~w~~l~~ 36 (41)
T d1fs1a1 17 CLPELLKVSGVCKRWYRLAS 36 (41)
T ss_dssp CGGGHHHHHTTCHHHHHHHT
T ss_pred CHHHHHHHHHHHHHHHHHhC
Confidence 46778899999999998753
No 44
>d2ovrb1 a.158.1.1 (B:2263-2364) F-box/WD repeat-containing protein 7, FBXW7 {Human (Homo sapiens) [TaxId: 9606]}
Probab=22.83 E-value=6 Score=29.48 Aligned_cols=20 Identities=15% Similarity=0.288 Sum_probs=17.3
Q ss_pred cccceeeecccCchhHHHhH
Q 039643 6 ELQIMDRISELPTFWKEKDE 25 (520)
Q Consensus 6 ~~~~AvrTsvLSkRWr~lW~ 25 (520)
++++.+|.+.+||+|+.+..
T Consensus 35 d~~dL~~~~~vcr~w~~l~~ 54 (102)
T d2ovrb1 35 EPKDLLQAAQTCRYWRILAE 54 (102)
T ss_dssp CHHHHHHHTTSCHHHHHHHT
T ss_pred CHHHHHHHHHHHHHHHHHHC
Confidence 67788999999999999654
Done!