Query 039645
Match_columns 188
No_of_seqs 335 out of 1506
Neff 7.0
Searched_HMMs 29240
Date Mon Mar 25 20:21:09 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/039645.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/039645hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3iwl_A Copper transport protei 99.6 1.6E-14 5.4E-19 95.9 8.6 67 59-127 1-67 (68)
2 3dxs_X Copper-transporting ATP 99.5 2.8E-13 9.7E-18 90.4 9.0 68 59-127 1-72 (74)
3 4a4j_A Pacszia, cation-transpo 99.4 5.9E-13 2E-17 87.6 9.5 65 60-125 2-69 (69)
4 3fry_A Probable copper-exporti 99.4 4.8E-13 1.7E-17 89.7 8.6 66 58-126 3-69 (73)
5 1cc8_A Protein (metallochapero 99.4 1.3E-12 4.4E-17 87.2 9.6 67 59-126 4-71 (73)
6 2crl_A Copper chaperone for su 99.3 1.6E-11 5.5E-16 87.5 11.1 70 59-129 18-87 (98)
7 2l3m_A Copper-ION-binding prot 99.3 3E-11 1E-15 78.8 9.9 64 58-122 3-70 (71)
8 2xmm_A SSR2857 protein, ATX1; 99.3 9.9E-12 3.4E-16 79.2 6.7 60 62-122 3-63 (64)
9 1osd_A MERP, hypothetical prot 99.3 4.3E-11 1.5E-15 78.0 9.8 66 59-125 2-71 (72)
10 2roe_A Heavy metal binding pro 99.3 1E-11 3.5E-16 80.6 6.5 62 63-125 3-65 (66)
11 2xmw_A PACS-N, cation-transpor 99.3 4.9E-11 1.7E-15 77.4 9.6 64 60-124 3-69 (71)
12 2k2p_A Uncharacterized protein 99.2 1.4E-11 4.7E-16 85.6 6.6 66 56-122 18-84 (85)
13 1y3j_A Copper-transporting ATP 99.2 2.6E-11 9E-16 80.8 7.4 68 58-126 1-72 (77)
14 1q8l_A Copper-transporting ATP 99.2 5.5E-11 1.9E-15 81.1 9.2 67 60-127 9-79 (84)
15 1aw0_A Menkes copper-transport 99.2 5.4E-11 1.9E-15 77.5 8.7 65 60-125 3-71 (72)
16 1mwy_A ZNTA; open-faced beta-s 99.2 9.1E-11 3.1E-15 77.3 9.8 66 59-125 2-69 (73)
17 3cjk_B Copper-transporting ATP 99.2 9.9E-11 3.4E-15 77.3 10.0 66 60-126 2-71 (75)
18 1opz_A Potential copper-transp 99.2 8.3E-11 2.8E-15 77.1 9.2 67 58-125 4-74 (76)
19 2qif_A Copper chaperone COPZ; 99.2 1.1E-10 3.7E-15 74.6 9.5 62 60-122 2-67 (69)
20 2g9o_A Copper-transporting ATP 99.2 7.8E-11 2.7E-15 82.0 9.0 67 60-127 3-76 (90)
21 1cpz_A Protein (COPZ); copper 99.2 9.8E-11 3.3E-15 75.3 8.7 61 63-124 3-67 (68)
22 1kvi_A Copper-transporting ATP 99.2 8.2E-11 2.8E-15 78.6 8.4 67 59-126 7-77 (79)
23 1fvq_A Copper-transporting ATP 99.2 1.3E-10 4.4E-15 75.7 8.9 65 61-126 3-70 (72)
24 2kt2_A Mercuric reductase; nme 99.2 1E-10 3.5E-15 75.9 8.1 62 63-125 3-67 (69)
25 1yg0_A COP associated protein; 99.2 1.4E-10 4.8E-15 74.2 7.9 61 61-122 2-65 (66)
26 1jww_A Potential copper-transp 99.2 1.7E-10 5.9E-15 76.8 8.5 67 59-126 2-72 (80)
27 2ldi_A Zinc-transporting ATPas 99.1 1.5E-10 5E-15 74.6 7.8 64 59-123 2-69 (71)
28 2kkh_A Putative heavy metal tr 99.1 4.3E-10 1.5E-14 78.5 10.6 73 55-128 11-87 (95)
29 2kyz_A Heavy metal binding pro 99.1 1.1E-10 3.7E-15 76.0 6.2 60 62-124 3-63 (67)
30 1yjr_A Copper-transporting ATP 99.1 2.6E-10 8.8E-15 74.8 7.6 65 60-125 4-72 (75)
31 2ofg_X Zinc-transporting ATPas 99.1 4.5E-10 1.5E-14 81.3 9.5 66 59-125 7-76 (111)
32 2ew9_A Copper-transporting ATP 99.1 4.5E-10 1.5E-14 83.5 8.6 65 60-125 80-148 (149)
33 1p6t_A Potential copper-transp 99.0 7.2E-10 2.4E-14 82.9 8.8 67 60-127 74-144 (151)
34 1qup_A Superoxide dismutase 1 99.0 1.4E-09 4.9E-14 88.6 10.0 70 60-130 6-75 (222)
35 2aj0_A Probable cadmium-transp 99.0 1.3E-09 4.4E-14 71.4 6.2 60 60-124 3-63 (71)
36 2rop_A Copper-transporting ATP 98.9 3.9E-09 1.3E-13 83.4 9.8 67 60-127 122-192 (202)
37 2ew9_A Copper-transporting ATP 98.9 5.8E-09 2E-13 77.5 8.9 67 59-126 3-73 (149)
38 1jk9_B CCS, copper chaperone f 98.9 5.3E-09 1.8E-13 86.7 9.2 70 60-130 7-76 (249)
39 1p6t_A Potential copper-transp 98.6 1.8E-07 6.2E-12 69.6 8.7 63 59-122 5-71 (151)
40 2rop_A Copper-transporting ATP 98.6 1E-07 3.5E-12 75.2 7.4 65 58-123 18-89 (202)
41 3j09_A COPA, copper-exporting 98.5 2.5E-07 8.5E-12 86.7 8.6 64 61-125 3-70 (723)
42 3bpd_A Uncharacterized protein 81.0 3.7 0.00013 28.8 5.5 66 59-126 6-80 (100)
43 2x3d_A SSO6206; unknown functi 79.3 4.9 0.00017 28.0 5.6 65 60-126 5-79 (96)
44 2raq_A Conserved protein MTH88 77.5 4.7 0.00016 28.2 5.1 66 59-126 6-80 (97)
45 3cq1_A Putative uncharacterize 76.2 3.8 0.00013 28.4 4.5 35 61-95 42-82 (103)
46 3lvj_C Sulfurtransferase TUSA; 71.7 16 0.00056 24.0 6.7 55 62-126 11-68 (82)
47 1uwd_A Hypothetical protein TM 70.8 5.9 0.0002 27.3 4.4 35 61-95 43-83 (103)
48 1jdq_A TM006 protein, hypothet 69.9 18 0.00061 24.9 6.7 55 62-126 27-84 (98)
49 2jsx_A Protein NAPD; TAT, proo 69.8 17 0.0006 24.9 6.7 45 71-115 16-61 (95)
50 3hz7_A Uncharacterized protein 62.5 20 0.00069 24.0 5.7 54 63-126 3-60 (87)
51 3lno_A Putative uncharacterize 60.5 7.4 0.00025 27.1 3.3 35 61-95 45-86 (108)
52 1je3_A EC005, hypothetical 8.6 58.5 16 0.00055 25.1 4.7 55 61-125 27-84 (97)
53 1fvg_A Peptide methionine sulf 46.3 50 0.0017 25.8 6.3 52 59-115 43-116 (199)
54 3bqh_A PILB, peptide methionin 44.1 55 0.0019 25.5 6.2 45 71-115 9-75 (193)
55 2j89_A Methionine sulfoxide re 40.9 64 0.0022 26.3 6.3 45 71-115 101-167 (261)
56 4gwb_A Peptide methionine sulf 40.1 50 0.0017 25.1 5.2 45 71-115 9-71 (168)
57 1rkl_A Dolichyl-diphosphooligo 39.5 11 0.00037 21.5 1.0 20 13-32 5-24 (36)
58 1owx_A Lupus LA protein, SS-B, 38.7 1E+02 0.0035 21.8 7.3 56 62-118 19-76 (121)
59 1ff3_A Peptide methionine sulf 38.1 81 0.0028 24.9 6.3 45 71-115 49-115 (211)
60 3e0m_A Peptide methionine sulf 36.8 69 0.0024 26.8 6.0 45 71-115 9-73 (313)
61 1pav_A Hypothetical protein TA 32.9 28 0.00096 22.4 2.5 52 63-124 8-62 (78)
62 2lat_A Dolichyl-diphosphooligo 30.3 16 0.00056 20.9 0.8 19 14-32 6-24 (37)
63 1nwa_A Peptide methionine sulf 30.2 1.1E+02 0.0039 23.9 5.9 45 71-115 32-94 (203)
No 1
>3iwl_A Copper transport protein ATOX1; beta-alpha-beta-BETA-alpha-beta, cisplatin, platinum, chaperone, ION transport, metal-binding, metal transport; HET: TCE; 1.60A {Homo sapiens} SCOP: d.58.17.1 PDB: 1fe4_A* 1fee_A* 1tl4_A 1tl5_A 2k1r_B 1fe0_A* 3iwx_A 3cjk_A
Probab=99.56 E-value=1.6e-14 Score=95.86 Aligned_cols=67 Identities=22% Similarity=0.503 Sum_probs=62.4
Q ss_pred ceEEEEEEcCcChhHHHHHHHHHhcCCCceEEEeecCCCEEEEEeeCCHHHHHHHHHHhcCCceEEcCC
Q 039645 59 LQTVEIKIKMDCEGCERRVKKSVEGMKGVTQVEVDPKQSKLTVIGYVDPDKVLERVRHRTGKKAEFWPY 127 (188)
Q Consensus 59 ~~~v~l~VgM~C~~C~~kV~kaL~~l~GV~~v~vd~~~~~v~V~~~v~~~~I~~~I~~~~G~~a~l~~~ 127 (188)
|.+.+|+|||+|.+|+.+|+++|++++|| ++++|+.+++++|.+.+++++|.++|+ ++||++++|++
T Consensus 1 m~~~~~~vgm~C~~C~~~i~~~l~~~~gV-~v~v~~~~~~~~v~~~~~~~~i~~~i~-~~Gy~~~~~~~ 67 (68)
T 3iwl_A 1 MPKHEFSVDMTCGGCAEAVSRVLNKLGGV-KYDIDLPNKKVCIESEHSMDTLLATLK-KTGKTVSYLGL 67 (68)
T ss_dssp -CEEEEEECCCSHHHHHHHHHHHHHHCSE-EEEEETTTTEEEEEESSCHHHHHHHHH-TTCSCEEEEEC
T ss_pred CceEEEEECcCcHHHHHHHHHHHHcCCCe-EEEEEcCCCEEEEEecCCHHHHHHHHH-HcCCceEecCC
Confidence 35677888999999999999999999999 999999999999999999999999999 99999999874
No 2
>3dxs_X Copper-transporting ATPase RAN1; CXXC motif, ferredoxin-like fold, ATP- binding, ethylene signaling pathway, hydrolase, ION transport; 1.70A {Arabidopsis thaliana} SCOP: d.58.17.0
Probab=99.47 E-value=2.8e-13 Score=90.43 Aligned_cols=68 Identities=21% Similarity=0.417 Sum_probs=62.7
Q ss_pred ceEEEEEE-cCcChhHHHHHHHHHhcCCCceEEEeecCCCEEEEEee---CCHHHHHHHHHHhcCCceEEcCC
Q 039645 59 LQTVEIKI-KMDCEGCERRVKKSVEGMKGVTQVEVDPKQSKLTVIGY---VDPDKVLERVRHRTGKKAEFWPY 127 (188)
Q Consensus 59 ~~~v~l~V-gM~C~~C~~kV~kaL~~l~GV~~v~vd~~~~~v~V~~~---v~~~~I~~~I~~~~G~~a~l~~~ 127 (188)
|++.+|.| ||+|.+|+.+|+++|++++||.++++|+.+++++|.++ ++.++|.++|+ ++||+++++..
T Consensus 1 M~~~~~~v~gm~C~~C~~~ie~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~-~~Gy~~~~~~~ 72 (74)
T 3dxs_X 1 MRKIQVGVTGMTCAACSNSVEAALMNVNGVFKASVALLQNRADVVFDPNLVKEEDIKEEIE-DAGFEAEILAE 72 (74)
T ss_dssp CEEEEEEEECCCSHHHHHHHHHHHHTSTTEEEEEEEGGGTEEEEEECTTTCCHHHHHHHHH-HHTCEEEEEEE
T ss_pred CcEEEEEECCcCCHHHHHHHHHHHhcCCCEEEEEEEecCCEEEEEECCCCCCHHHHHHHHH-HCCCceEEccC
Confidence 56789999 99999999999999999999999999999999999864 68999999999 99999988753
No 3
>4a4j_A Pacszia, cation-transporting ATPase PACS; hydrolase, copper homeostasis, zinc homeostasis, ATX1, metal-transporting atpases; 1.25A {Synechocystis} PDB: 4a48_A 2gcf_A 2xmw_A
Probab=99.45 E-value=5.9e-13 Score=87.56 Aligned_cols=65 Identities=23% Similarity=0.466 Sum_probs=60.1
Q ss_pred eEEEEEE-cCcChhHHHHHHHHHhcCCCceEEEeecCCCEEEEEe--eCCHHHHHHHHHHhcCCceEEc
Q 039645 60 QTVEIKI-KMDCEGCERRVKKSVEGMKGVTQVEVDPKQSKLTVIG--YVDPDKVLERVRHRTGKKAEFW 125 (188)
Q Consensus 60 ~~v~l~V-gM~C~~C~~kV~kaL~~l~GV~~v~vd~~~~~v~V~~--~v~~~~I~~~I~~~~G~~a~l~ 125 (188)
++++|.| ||+|.+|+.+|+++|++++||.++++|+.+++++|.+ ..+++++.++|+ +.||+++++
T Consensus 2 ~~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~i~~~i~-~~Gy~~~~~ 69 (69)
T 4a4j_A 2 QTINLQLEGMDCTSCASSIERAIAKVPGVQSCQVNFALEQAVVSYHGETTPQILTDAVE-RAGYHARVL 69 (69)
T ss_dssp EEEEEEEESCCSHHHHHHHHHHHHTSTTEEEEEEETTTTEEEEEECTTCCHHHHHHHHH-HTTCEEEEC
T ss_pred CEEEEEECCeecHHHHHHHHHHHhcCCCeEEEEEEecCCEEEEEECCCCCHHHHHHHHH-HcCCceEeC
Confidence 5678999 9999999999999999999999999999999999984 478999999999 999998763
No 4
>3fry_A Probable copper-exporting P-type ATPase A; transport protein, metal binding domain, domain SWAP, ATP-BI cell membrane, copper transport; HET: CIT; 2.00A {Archaeoglobus fulgidus}
Probab=99.44 E-value=4.8e-13 Score=89.66 Aligned_cols=66 Identities=24% Similarity=0.432 Sum_probs=62.5
Q ss_pred CceEEEEEE-cCcChhHHHHHHHHHhcCCCceEEEeecCCCEEEEEeeCCHHHHHHHHHHhcCCceEEcC
Q 039645 58 QLQTVEIKI-KMDCEGCERRVKKSVEGMKGVTQVEVDPKQSKLTVIGYVDPDKVLERVRHRTGKKAEFWP 126 (188)
Q Consensus 58 ~~~~v~l~V-gM~C~~C~~kV~kaL~~l~GV~~v~vd~~~~~v~V~~~v~~~~I~~~I~~~~G~~a~l~~ 126 (188)
.|++.+|.| ||+|.+|+.+|+++|++ +||..+++|+.+++++|.++ +.++|.++|+ ++||.+++.+
T Consensus 3 ~m~~~~~~v~gm~C~~C~~~ie~~l~~-~gv~~~~v~~~~~~~~v~~~-~~~~i~~~i~-~~Gy~~~~~~ 69 (73)
T 3fry_A 3 SVEKIVLELSGLSCHHCVARVKKALEE-AGAKVEKVDLNEAVVAGNKE-DVDKYIKAVE-AAGYQAKLRS 69 (73)
T ss_dssp CCEEEEEEEESSBCGGGHHHHHHHHHH-TTCEEEEECSSEEEEEEEGG-GHHHHHHHHH-HTTCEEEECC
T ss_pred ccEEEEEEECCCCCHHHHHHHHHHhcc-CCcEEEEEEccCCEEEEEEC-CHHHHHHHHH-HcCCceEecC
Confidence 467889999 99999999999999999 99999999999999999988 9999999999 9999998876
No 5
>1cc8_A Protein (metallochaperone ATX1); copper transport, mercury coordination, metal transport; 1.02A {Saccharomyces cerevisiae} SCOP: d.58.17.1 PDB: 1cc7_A 1fd8_A 1fes_A 2ggp_A 3k7r_A
Probab=99.42 E-value=1.3e-12 Score=87.22 Aligned_cols=67 Identities=21% Similarity=0.475 Sum_probs=62.6
Q ss_pred ceEEEEEEcCcChhHHHHHHHHHhcCC-CceEEEeecCCCEEEEEeeCCHHHHHHHHHHhcCCceEEcC
Q 039645 59 LQTVEIKIKMDCEGCERRVKKSVEGMK-GVTQVEVDPKQSKLTVIGYVDPDKVLERVRHRTGKKAEFWP 126 (188)
Q Consensus 59 ~~~v~l~VgM~C~~C~~kV~kaL~~l~-GV~~v~vd~~~~~v~V~~~v~~~~I~~~I~~~~G~~a~l~~ 126 (188)
+.+.+|+|.|+|++|+.+|+++|++++ ||.++++|+.+++++|.+..+.+++.+.|+ ++||++.+|.
T Consensus 4 m~~~~~~v~m~C~~C~~~ie~~l~~~~~GV~~~~v~~~~~~~~v~~~~~~~~i~~~i~-~~Gy~~~~~~ 71 (73)
T 1cc8_A 4 IKHYQFNVVMTCSGCSGAVNKVLTKLEPDVSKIDISLEKQLVDVYTTLPYDFILEKIK-KTGKEVRSGK 71 (73)
T ss_dssp CEEEEEEECCCSHHHHHHHHHHHHTTTTSEEEEEEETTTTEEEEEESSCHHHHHHHHH-TTSSCEEEEE
T ss_pred ceEEEEEEeeECHHHHHHHHHHHHhCCCCceEEEEECCCCEEEEEEeCCHHHHHHHHH-HhCCCceeee
Confidence 466788889999999999999999999 999999999999999998889999999999 9999998875
No 6
>2crl_A Copper chaperone for superoxide dismutase; SOD1, familial ALS, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.33 E-value=1.6e-11 Score=87.48 Aligned_cols=70 Identities=29% Similarity=0.454 Sum_probs=64.7
Q ss_pred ceEEEEEEcCcChhHHHHHHHHHhcCCCceEEEeecCCCEEEEEeeCCHHHHHHHHHHhcCCceEEcCCCC
Q 039645 59 LQTVEIKIKMDCEGCERRVKKSVEGMKGVTQVEVDPKQSKLTVIGYVDPDKVLERVRHRTGKKAEFWPYVP 129 (188)
Q Consensus 59 ~~~v~l~VgM~C~~C~~kV~kaL~~l~GV~~v~vd~~~~~v~V~~~v~~~~I~~~I~~~~G~~a~l~~~~p 129 (188)
+.+++|+|.|+|.+|+.+|+++|++++||.++++|+.+++++|.+.++.++|.++|+ ++||++.++...+
T Consensus 18 ~~~~~l~V~m~C~~C~~~Ie~aL~~l~GV~~v~vdl~~~~~~V~~~~~~~~i~~~i~-~~Gy~~~~~~~~~ 87 (98)
T 2crl_A 18 LCTLEFAVQMTCQSCVDAVRKSLQGVAGVQDVEVHLEDQMVLVHTTLPSQEVQALLE-GTGRQAVLKGMGS 87 (98)
T ss_dssp CEEEEEEECCCSHHHHHHHHHTTTTCTTCCEEEEETTTTEEEEEESSCHHHHHHHHH-TTTSCEEEEESCC
T ss_pred ceEEEEEEeeECHHHHHHHHHHHHcCCCceEEEEECCCCEEEEEEeCCHHHHHHHHH-HhCCceEEccCCC
Confidence 467788889999999999999999999999999999999999998889999999999 9999999987543
No 7
>2l3m_A Copper-ION-binding protein; structural genomics, center for structural genomics of infec diseases, csgid, metal binding protein; NMR {Bacillus anthracis}
Probab=99.29 E-value=3e-11 Score=78.75 Aligned_cols=64 Identities=20% Similarity=0.424 Sum_probs=58.2
Q ss_pred CceEEEEEE-cCcChhHHHHHHHHHhcCCCceEEEeecCCCEEEEEee---CCHHHHHHHHHHhcCCce
Q 039645 58 QLQTVEIKI-KMDCEGCERRVKKSVEGMKGVTQVEVDPKQSKLTVIGY---VDPDKVLERVRHRTGKKA 122 (188)
Q Consensus 58 ~~~~v~l~V-gM~C~~C~~kV~kaL~~l~GV~~v~vd~~~~~v~V~~~---v~~~~I~~~I~~~~G~~a 122 (188)
.+.+..|+| ||+|.+|+.+|+++|.+++||..+.+|+..++++|.++ ++.+++.+.|+ ++||.+
T Consensus 3 ~~~~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~-~~G~~~ 70 (71)
T 2l3m_A 3 AMEQLTLQVEGMSCGHCVNAIESSVKELNGVEQVKVQLAEGTVEVTIDSSVVTLKDIVAVIE-DQGYDV 70 (71)
T ss_dssp SEEEEEEEEECCCSHHHHHHHHHHHHTSTTEEEEEEETTTTEEEEEEETTTSCHHHHHHHHH-HTTCEE
T ss_pred CcEEEEEEECCccCHHHHHHHHHHHHcCCCeEEEEEEecCCEEEEEECCCCCCHHHHHHHHH-HcCCCC
Confidence 356788999 99999999999999999999999999999999999864 57889999999 999975
No 8
>2xmm_A SSR2857 protein, ATX1; metal transport, copper homeostasis, chaperone, P-type atpas; 1.65A {Synechocystis SP} PDB: 2xmv_A 1sb6_A 2xmj_A 2xmk_A 2xmt_A 2xmu_A
Probab=99.27 E-value=9.9e-12 Score=79.17 Aligned_cols=60 Identities=20% Similarity=0.468 Sum_probs=56.3
Q ss_pred EEEEE-cCcChhHHHHHHHHHhcCCCceEEEeecCCCEEEEEeeCCHHHHHHHHHHhcCCce
Q 039645 62 VEIKI-KMDCEGCERRVKKSVEGMKGVTQVEVDPKQSKLTVIGYVDPDKVLERVRHRTGKKA 122 (188)
Q Consensus 62 v~l~V-gM~C~~C~~kV~kaL~~l~GV~~v~vd~~~~~v~V~~~v~~~~I~~~I~~~~G~~a 122 (188)
..|.| ||+|.+|+.+|+++|.+++||.++++|+.+++++|.+..+.+++.+.|+ ++||.+
T Consensus 3 ~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~i~~~i~-~~G~~~ 63 (64)
T 2xmm_A 3 IQLTVPTIACEACAEAVTKAVQNEDAQATVQVDLTSKKVTITSALGEEQLRTAIA-SAGYEV 63 (64)
T ss_dssp EEEECTTCCSHHHHHHHHHHHHHHCTTCEEEECTTTCEEEEECSSCHHHHHHHHH-HTTCCC
T ss_pred EEEEECCcCcHHHHHHHHHHHhcCCCcEEEEEEecCCEEEEEecCCHHHHHHHHH-HcCCCC
Confidence 46899 9999999999999999999999999999999999997788999999999 999975
No 9
>1osd_A MERP, hypothetical protein MERP; mercury resistance, metal binding protein, perisplasm, structural genomics; 2.00A {Cupriavidus metallidurans} SCOP: d.58.17.1 PDB: 1afi_A 1afj_A 2hqi_A
Probab=99.27 E-value=4.3e-11 Score=78.05 Aligned_cols=66 Identities=24% Similarity=0.371 Sum_probs=59.2
Q ss_pred ceEEEEEE-cCcChhHHHHHHHHHhcCCCceEEEeecCCCEEEEEee---CCHHHHHHHHHHhcCCceEEc
Q 039645 59 LQTVEIKI-KMDCEGCERRVKKSVEGMKGVTQVEVDPKQSKLTVIGY---VDPDKVLERVRHRTGKKAEFW 125 (188)
Q Consensus 59 ~~~v~l~V-gM~C~~C~~kV~kaL~~l~GV~~v~vd~~~~~v~V~~~---v~~~~I~~~I~~~~G~~a~l~ 125 (188)
+++..|+| ||+|.+|+.+|+++|.+++||.++.+|+..++++|.++ .+.+++.+.|+ +.||.+.+.
T Consensus 2 ~~~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~-~~G~~~~~~ 71 (72)
T 1osd_A 2 TQTVTLSVPGMTCSACPITVKKAISKVEGVSKVDVTFETRQAVVTFDDAKTSVQKLTKATA-DAGYPSSVK 71 (72)
T ss_dssp EEEEEEECTTCCSTTHHHHHHHHHHTSTTEEEEEEETTTTEEEEEEETTTCCHHHHHHHHH-HTTCCCEEC
T ss_pred ceEEEEEECCeEcHHHHHHHHHHHhcCCCeEEEEEEecCCEEEEEECCCCCCHHHHHHHHH-hcCCCeEec
Confidence 35678999 99999999999999999999999999999999999865 57889999999 999987653
No 10
>2roe_A Heavy metal binding protein; NMR {Thermus thermophilus} PDB: 2rog_A
Probab=99.26 E-value=1e-11 Score=80.57 Aligned_cols=62 Identities=32% Similarity=0.560 Sum_probs=57.0
Q ss_pred EEEE-cCcChhHHHHHHHHHhcCCCceEEEeecCCCEEEEEeeCCHHHHHHHHHHhcCCceEEc
Q 039645 63 EIKI-KMDCEGCERRVKKSVEGMKGVTQVEVDPKQSKLTVIGYVDPDKVLERVRHRTGKKAEFW 125 (188)
Q Consensus 63 ~l~V-gM~C~~C~~kV~kaL~~l~GV~~v~vd~~~~~v~V~~~v~~~~I~~~I~~~~G~~a~l~ 125 (188)
+|.| ||+|.+|+.+|+++|.+++||.++++|+.+++++|.+..+.+++.+.|+ ++||.+...
T Consensus 3 ~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~i~~~i~-~~Gy~~~~~ 65 (66)
T 2roe_A 3 KLKVEGMTCNHCVMAVTKALKKVPGVEKVEVSLEKGEALVEGTADPKALVQAVE-EEGYKAEVL 65 (66)
T ss_dssp CEEEECCCSHHHHHHHHHHHHTSTTCCCEEECSSSCBEEECSCCCHHHHHHHHH-TTTCEEEEC
T ss_pred EEEECCeEcHHHHHHHHHHHHcCCCeEEEEEEeCCCEEEECCCCCHHHHHHHHH-HcCCCcEec
Confidence 5889 9999999999999999999999999999999999965678999999999 999987653
No 11
>2xmw_A PACS-N, cation-transporting ATPase PACS; hydrolase, Cu(I)-binding, trafficking; 1.80A {Synechocystis SP} PDB: 2gcf_A
Probab=99.26 E-value=4.9e-11 Score=77.40 Aligned_cols=64 Identities=22% Similarity=0.455 Sum_probs=57.6
Q ss_pred eEEEEEE-cCcChhHHHHHHHHHhcCCCceEEEeecCCCEEEEEee--CCHHHHHHHHHHhcCCceEE
Q 039645 60 QTVEIKI-KMDCEGCERRVKKSVEGMKGVTQVEVDPKQSKLTVIGY--VDPDKVLERVRHRTGKKAEF 124 (188)
Q Consensus 60 ~~v~l~V-gM~C~~C~~kV~kaL~~l~GV~~v~vd~~~~~v~V~~~--v~~~~I~~~I~~~~G~~a~l 124 (188)
++..|.| ||+|++|+.+|+++|.+++||.++++|+..++++|.++ .+.+++.+.|+ ++||.+.+
T Consensus 3 ~~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~i~~~i~-~~G~~~~~ 69 (71)
T 2xmw_A 3 QTINLQLEGMRCAACASSIERAIAKVPGVQSCQVNFALEQAVVSYHGETTPQILTDAVE-RAGYHARV 69 (71)
T ss_dssp EEEEEEEECCCSHHHHHHHHHHHHTSTTEEEEEEETTTTEEEEEEC---CHHHHHHHHH-HHTCEEEE
T ss_pred cEEEEEECCcccHHHHHHHHHHHhcCCCeEEEEEEccCCEEEEEECCCCCHHHHHHHHH-HcCCCcee
Confidence 5678999 99999999999999999999999999999999999864 57788999999 99998765
No 12
>2k2p_A Uncharacterized protein ATU1203; putative metal-binding domain ATU1203, ontario centre for ST proteomics, structural genomics; NMR {Agrobacterium tumefaciens str}
Probab=99.24 E-value=1.4e-11 Score=85.56 Aligned_cols=66 Identities=21% Similarity=0.323 Sum_probs=58.8
Q ss_pred cCCceEEEEEE-cCcChhHHHHHHHHHhcCCCceEEEeecCCCEEEEEeeCCHHHHHHHHHHhcCCce
Q 039645 56 RKQLQTVEIKI-KMDCEGCERRVKKSVEGMKGVTQVEVDPKQSKLTVIGYVDPDKVLERVRHRTGKKA 122 (188)
Q Consensus 56 ~~~~~~v~l~V-gM~C~~C~~kV~kaL~~l~GV~~v~vd~~~~~v~V~~~v~~~~I~~~I~~~~G~~a 122 (188)
...+.+.+|.| ||+|.+|+.+|+++|++++||.++++|+.+++++|.+.++.++|.+.|+ ++||.+
T Consensus 18 ~~~~~~~~l~V~Gm~C~~C~~~Ie~aL~~~~GV~~v~v~l~~~~~~V~~~~~~~~i~~~i~-~~Gy~~ 84 (85)
T 2k2p_A 18 YFQGAGLSFHVEDMTCGHCAGVIKGAIEKTVPGAAVHADPASRTVVVGGVSDAAHIAEIIT-AAGYTP 84 (85)
T ss_dssp ----CEEEEECTTCCHHHHHHHHHHHHHHHSTTCEEEEETTTTEEEEESCCCHHHHHHHHH-HTTCCC
T ss_pred cccccEEEEEECCCCCHHHHHHHHHHHhcCCCeeEEEEECCCCEEEEEecCCHHHHHHHHH-HcCCCC
Confidence 33456778999 9999999999999999999999999999999999998889999999999 999975
No 13
>1y3j_A Copper-transporting ATPase 1; ferrodoxin-like fold, beta-alpha-beta-BETA-alpha-beta structure, structural proteomics in europe, spine; NMR {Homo sapiens} PDB: 1y3k_A
Probab=99.23 E-value=2.6e-11 Score=80.80 Aligned_cols=68 Identities=19% Similarity=0.315 Sum_probs=61.6
Q ss_pred CceEEEEEE-cCcChhHHHHHHHHHhcCCCceEEEeecCCCEEEEEee---CCHHHHHHHHHHhcCCceEEcC
Q 039645 58 QLQTVEIKI-KMDCEGCERRVKKSVEGMKGVTQVEVDPKQSKLTVIGY---VDPDKVLERVRHRTGKKAEFWP 126 (188)
Q Consensus 58 ~~~~v~l~V-gM~C~~C~~kV~kaL~~l~GV~~v~vd~~~~~v~V~~~---v~~~~I~~~I~~~~G~~a~l~~ 126 (188)
+|++..|.| ||+|.+|+.+|+++|.+++||..+++|+..++++|.++ ++.+++.+.|+ ++||.+.++.
T Consensus 1 ~m~~~~~~v~gm~C~~C~~~ie~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~-~~Gy~~~~~~ 72 (77)
T 1y3j_A 1 NSSKCYIQVTGMTCASCVANIERNLRREEGIYSILVALMAGKAEVRYNPAVIQPPMIAEFIR-ELGFGATVIE 72 (77)
T ss_dssp CCEEEEEEESCGGGCSHHHHHHHHHTTSSSEEECCCBTTTTBEEEEECTTTSCHHHHHHHHH-HHTSCEEEES
T ss_pred CCEEEEEEECCeeCHHHHHHHHHHHhcCCCeEEEEEEecCCEEEEEECCCCCCHHHHHHHHH-HcCCceEECC
Confidence 367788999 99999999999999999999999999999999999864 57788999999 9999987764
No 14
>1q8l_A Copper-transporting ATPase 1; metal binding protein; NMR {Homo sapiens} SCOP: d.58.17.1 PDB: 1s6o_A 1s6u_A
Probab=99.23 E-value=5.5e-11 Score=81.13 Aligned_cols=67 Identities=15% Similarity=0.365 Sum_probs=61.2
Q ss_pred eEEEEEE-cCcChhHHHHHHHHHhcCCCceEEEeecCCCEEEEEee---CCHHHHHHHHHHhcCCceEEcCC
Q 039645 60 QTVEIKI-KMDCEGCERRVKKSVEGMKGVTQVEVDPKQSKLTVIGY---VDPDKVLERVRHRTGKKAEFWPY 127 (188)
Q Consensus 60 ~~v~l~V-gM~C~~C~~kV~kaL~~l~GV~~v~vd~~~~~v~V~~~---v~~~~I~~~I~~~~G~~a~l~~~ 127 (188)
.++.|+| ||+|.+|+.+|+++|.+++||..+++|+..++++|.++ ++.+++.+.|+ ++||.+.+...
T Consensus 9 ~~~~~~v~gm~C~~C~~~ie~~l~~~~GV~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~-~~Gy~~~~~~~ 79 (84)
T 1q8l_A 9 VVLKMKVEGMTCHSCTSTIEGKIGKLQGVQRIKVSLDNQEATIVYQPHLISVEEMKKQIE-AMGFPAFVKKQ 79 (84)
T ss_dssp EEEEEEECCTTTCSSCHHHHHHHHTCTTEEEEEECSTTTEEEEEECTTTCCHHHHHHHHH-HTTCCEECSCC
T ss_pred eEEEEEECCcccHHHHHHHHHHHHcCCCeEEEEEEecCCEEEEEECCCCCCHHHHHHHHH-HcCCceEecCC
Confidence 5678999 99999999999999999999999999999999999864 57889999999 99999887764
No 15
>1aw0_A Menkes copper-transporting ATPase; copper-binding domain, hydrolase; NMR {Homo sapiens} SCOP: d.58.17.1 PDB: 2aw0_A
Probab=99.23 E-value=5.4e-11 Score=77.55 Aligned_cols=65 Identities=23% Similarity=0.340 Sum_probs=58.7
Q ss_pred eEEEEEE-cCcChhHHHHHHHHHhcCCCceEEEeecCCCEEEEEee---CCHHHHHHHHHHhcCCceEEc
Q 039645 60 QTVEIKI-KMDCEGCERRVKKSVEGMKGVTQVEVDPKQSKLTVIGY---VDPDKVLERVRHRTGKKAEFW 125 (188)
Q Consensus 60 ~~v~l~V-gM~C~~C~~kV~kaL~~l~GV~~v~vd~~~~~v~V~~~---v~~~~I~~~I~~~~G~~a~l~ 125 (188)
++..|.| ||+|.+|+.+|+++|.+++||.++.+|+..++++|.++ ++.+++.+.|+ ++||.+.+.
T Consensus 3 ~~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~-~~G~~~~~~ 71 (72)
T 1aw0_A 3 QETVINIDGMTCNSCVQSIEGVISKKPGVKSIRVSLANSNGTVEYDPLLTSPETLRGAIE-DMGFDATLS 71 (72)
T ss_dssp EEEEEEEECCCHHHHHHHHHHHHHTSTTCCCEEEETTTTEEEEEECTTTCCHHHHHHHHH-HHTCEEEEC
T ss_pred eEEEEEECCeecHHHHHHHHHHHhcCCCeEEEEEEccCCEEEEEECCCcCCHHHHHHHHH-HCCCCcEeC
Confidence 4567999 99999999999999999999999999999999999865 57889999999 999987654
No 16
>1mwy_A ZNTA; open-faced beta-sandwich fold, beta-alpha-beta-BETA-alpha- beta, hydrolase; NMR {Escherichia coli} SCOP: d.58.17.1 PDB: 1mwz_A
Probab=99.23 E-value=9.1e-11 Score=77.32 Aligned_cols=66 Identities=27% Similarity=0.324 Sum_probs=58.6
Q ss_pred ceEEEEEE-cCcChhHHHHHHHHHhcCCCceEEEeecCCCEEEEEeeC-CHHHHHHHHHHhcCCceEEc
Q 039645 59 LQTVEIKI-KMDCEGCERRVKKSVEGMKGVTQVEVDPKQSKLTVIGYV-DPDKVLERVRHRTGKKAEFW 125 (188)
Q Consensus 59 ~~~v~l~V-gM~C~~C~~kV~kaL~~l~GV~~v~vd~~~~~v~V~~~v-~~~~I~~~I~~~~G~~a~l~ 125 (188)
|.+..|.| ||+|.+|+.+|+++|.+++||..+.+|+..++++|.++. ..+++.+.|+ ++||.+...
T Consensus 2 m~~~~~~v~gm~C~~C~~~ie~~l~~~~gV~~~~v~~~~~~~~v~~~~~~~~~i~~~i~-~~Gy~~~~~ 69 (73)
T 1mwy_A 2 GTRYSWKVSGMDCAACARKVENAVRQLAGVNQVQVLFATEKLVVDADNDIRAQVESALQ-KAGYSLRDE 69 (73)
T ss_dssp CEEEEEEEESCCSTTHHHHHHHHHHTSSSEEEEEEETTTTEEEEEESSCCHHHHHHHHH-HHTCEEEEC
T ss_pred CeEEEEEECCcCCHHHHHHHHHHHhcCCCeeEEEEEecCCEEEEEECCCCHHHHHHHHH-HcCCccccc
Confidence 56778999 999999999999999999999999999999999998653 3678899999 999987653
No 17
>3cjk_B Copper-transporting ATPase 1; HAH1, ATP7B, menkes disease, metal homeostasis, chaperone, ION transport, metal- binding, alternative splicing; 1.80A {Homo sapiens} PDB: 2k1r_A
Probab=99.23 E-value=9.9e-11 Score=77.28 Aligned_cols=66 Identities=21% Similarity=0.424 Sum_probs=59.5
Q ss_pred eEEEEEE-cCcChhHHHHHHHHHhcCCCceEEEeecCCCEEEEEee---CCHHHHHHHHHHhcCCceEEcC
Q 039645 60 QTVEIKI-KMDCEGCERRVKKSVEGMKGVTQVEVDPKQSKLTVIGY---VDPDKVLERVRHRTGKKAEFWP 126 (188)
Q Consensus 60 ~~v~l~V-gM~C~~C~~kV~kaL~~l~GV~~v~vd~~~~~v~V~~~---v~~~~I~~~I~~~~G~~a~l~~ 126 (188)
.++.|.| ||+|.+|+.+|+++|.+++||..+.+|+..+++.|.++ ++.+++.+.|+ ++||.+.+..
T Consensus 2 ~~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~-~~Gy~~~~~~ 71 (75)
T 3cjk_B 2 NSVTISVEGMTCNSCVWTIEQQIGKVNGVHHIKVSLEEKNATIIYDPKLQTPKTLQEAID-DMGFDAVIHN 71 (75)
T ss_dssp EEEEEEECCCCSHHHHHHHHHHHHTSTTEEEEEEETTTTEEEEEECTTTCCHHHHHHHHH-HTTCCEEEEE
T ss_pred cEEEEEECCccCHHHHHHHHHHHhcCCCeEEEEEEecCCEEEEEECCCCCCHHHHHHHHH-HcCCceEeec
Confidence 3567999 99999999999999999999999999999999999864 57889999999 9999987754
No 18
>1opz_A Potential copper-transporting ATPase; mutation, folding, abbab fold, hydrolase; NMR {Bacillus subtilis} SCOP: d.58.17.1 PDB: 1oq3_A 1oq6_A
Probab=99.22 E-value=8.3e-11 Score=77.13 Aligned_cols=67 Identities=21% Similarity=0.443 Sum_probs=60.1
Q ss_pred CceEEEEEE-cCcChhHHHHHHHHHhcCCCceEEEeecCCCEEEEEee---CCHHHHHHHHHHhcCCceEEc
Q 039645 58 QLQTVEIKI-KMDCEGCERRVKKSVEGMKGVTQVEVDPKQSKLTVIGY---VDPDKVLERVRHRTGKKAEFW 125 (188)
Q Consensus 58 ~~~~v~l~V-gM~C~~C~~kV~kaL~~l~GV~~v~vd~~~~~v~V~~~---v~~~~I~~~I~~~~G~~a~l~ 125 (188)
.+.+..|+| ||+|.+|+.+|+++|.+++||..+.+|+..+++.|..+ .+.+++.+.|+ ++||.+.++
T Consensus 4 ~~~~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~-~~G~~~~~~ 74 (76)
T 1opz_A 4 EQKEIAMQVSGMTCAACAARIEKGLKRMPGVTDANVNLATETVNVIYDPAETGTAAIQEKIE-KLGYHVVIE 74 (76)
T ss_dssp CCEEEEEEEESCCSTTHHHHHHHHHHTSTTEEEEEEEGGGTEEEEEECTTTCCHHHHHHHHH-HHTCEEECC
T ss_pred cceEEEEEECCcccHHHHHHHHHHHhcCCCeEEEEEEecCCEEEEEECCCCCCHHHHHHHHH-HCCCceecC
Confidence 356778999 99999999999999999999999999999999999864 57888999999 999987665
No 19
>2qif_A Copper chaperone COPZ; tetranuclear Cu(I) cluster; 1.50A {Bacillus subtilis} SCOP: d.58.17.1 PDB: 3i9z_A 1k0v_A 1p8g_A
Probab=99.21 E-value=1.1e-10 Score=74.57 Aligned_cols=62 Identities=23% Similarity=0.433 Sum_probs=56.3
Q ss_pred eEEEEEE-cCcChhHHHHHHHHHhcCCCceEEEeecCCCEEEEEee---CCHHHHHHHHHHhcCCce
Q 039645 60 QTVEIKI-KMDCEGCERRVKKSVEGMKGVTQVEVDPKQSKLTVIGY---VDPDKVLERVRHRTGKKA 122 (188)
Q Consensus 60 ~~v~l~V-gM~C~~C~~kV~kaL~~l~GV~~v~vd~~~~~v~V~~~---v~~~~I~~~I~~~~G~~a 122 (188)
.+..|.| ||+|.+|+.+|+++|.+++||..+.+|+..+++.|.++ .+.+++.+.|+ ++||.+
T Consensus 2 ~~~~~~v~gm~C~~c~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~-~~G~~~ 67 (69)
T 2qif_A 2 EQKTLQVEGMSCQHCVKAVETSVGELDGVSAVHVNLEAGKVDVSFDADKVSVKDIADAIE-DQGYDV 67 (69)
T ss_dssp EEEEEEEECCCSHHHHHHHHHHHHTSTTEEEEEEETTTTEEEEEECTTTCCHHHHHHHHH-HTTCEE
T ss_pred eEEEEEECCcccHHHHHHHHHHHhcCCCeeEEEEEecCCEEEEEECCCCCCHHHHHHHHH-HcCCCc
Confidence 4567999 99999999999999999999999999999999999864 57888999999 999965
No 20
>2g9o_A Copper-transporting ATPase 1; menkes disease, solution structure, structural genomics, structural proteomics in europe, spine, hydrolase; NMR {Homo sapiens} PDB: 2ga7_A
Probab=99.20 E-value=7.8e-11 Score=81.99 Aligned_cols=67 Identities=15% Similarity=0.292 Sum_probs=60.0
Q ss_pred eEEEEEE-cCcChhHHHHHHHHHhcCCCceEEEeecCCCEEEEEee---CCHHHHHHHHHHhc---CCceEEcCC
Q 039645 60 QTVEIKI-KMDCEGCERRVKKSVEGMKGVTQVEVDPKQSKLTVIGY---VDPDKVLERVRHRT---GKKAEFWPY 127 (188)
Q Consensus 60 ~~v~l~V-gM~C~~C~~kV~kaL~~l~GV~~v~vd~~~~~v~V~~~---v~~~~I~~~I~~~~---G~~a~l~~~ 127 (188)
.++.|.| ||+|.+|+.+|+++|.+++||.++++|+.+++++|.++ ++.++|.++|+ ++ ||++.++.+
T Consensus 3 ~~~~l~v~Gm~C~~C~~~Ie~~L~~~~GV~~v~v~l~~~~~~V~~~~~~~~~~~i~~~i~-~~g~Ggy~~~~~~~ 76 (90)
T 2g9o_A 3 STATFIIDGMHCKSCVSNIESTLSALQYVSSIVVSLENRSAIVVYNASSVTPESLRKAIE-AVSPGLYRVSITSE 76 (90)
T ss_dssp EEEEEEEESCCHHHHHHHHHHHHTTCTTEEEEEEETTTTEEEEEECCSSCCTHHHHHHHH-TTSTTTCEEECCCC
T ss_pred cEEEEEECCcCCHHHHHHHHHHHHcCCCeeEEEEEccCCEEEEEECCCCCCHHHHHHHHH-hccCCCeEEEEeCC
Confidence 4567999 99999999999999999999999999999999999864 57789999999 99 598887764
No 21
>1cpz_A Protein (COPZ); copper chaperone, metal transport, gene regulation; NMR {Enterococcus hirae} SCOP: d.58.17.1
Probab=99.20 E-value=9.8e-11 Score=75.32 Aligned_cols=61 Identities=28% Similarity=0.485 Sum_probs=56.3
Q ss_pred EEEE-cCcChhHHHHHHHHHhcCCCceEEEeecCCCEEEEEee---CCHHHHHHHHHHhcCCceEE
Q 039645 63 EIKI-KMDCEGCERRVKKSVEGMKGVTQVEVDPKQSKLTVIGY---VDPDKVLERVRHRTGKKAEF 124 (188)
Q Consensus 63 ~l~V-gM~C~~C~~kV~kaL~~l~GV~~v~vd~~~~~v~V~~~---v~~~~I~~~I~~~~G~~a~l 124 (188)
.|+| ||+|.+|+.+|+++|.+++||..+++|+..++++|.++ .+.+++.+.|+ +.||++++
T Consensus 3 ~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~-~~G~~~~~ 67 (68)
T 1cpz_A 3 EFSVKGMSCNHCVARIEEAVGRISGVKKVKVQLKKEKAVVKFDEANVQATEICQAIN-ELGYQAEV 67 (68)
T ss_dssp EEEESCCCSSSHHHHHHHHHHTSTTEEEEEEETTTTEEEEEECTTTCCHHHHHHHHH-TTSSCEEE
T ss_pred EEEECCeeCHHHHHHHHHHHHcCCCeEEEEEEecCCEEEEEECCCCCCHHHHHHHHH-HcCCCccc
Confidence 5889 99999999999999999999999999999999999864 57889999999 99998775
No 22
>1kvi_A Copper-transporting ATPase 1; menkes, Cu-protein, hydrolase; NMR {Homo sapiens} SCOP: d.58.17.1 PDB: 1kvj_A
Probab=99.19 E-value=8.2e-11 Score=78.58 Aligned_cols=67 Identities=21% Similarity=0.427 Sum_probs=60.6
Q ss_pred ceEEEEEE-cCcChhHHHHHHHHHhcCCCceEEEeecCCCEEEEEee---CCHHHHHHHHHHhcCCceEEcC
Q 039645 59 LQTVEIKI-KMDCEGCERRVKKSVEGMKGVTQVEVDPKQSKLTVIGY---VDPDKVLERVRHRTGKKAEFWP 126 (188)
Q Consensus 59 ~~~v~l~V-gM~C~~C~~kV~kaL~~l~GV~~v~vd~~~~~v~V~~~---v~~~~I~~~I~~~~G~~a~l~~ 126 (188)
+.+..|.| ||+|.+|+.+|+++|.+++||.++++|+.+++++|.++ .+.+++.+.|+ ++||.+.+.+
T Consensus 7 ~~~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~-~~Gy~~~~~~ 77 (79)
T 1kvi_A 7 VNSVTISVEGMTCNSCVWTIEQQIGKVNGVHHIKVSLEEKNATIIYDPKLQTPKTLQEAID-DMGFDAVIHN 77 (79)
T ss_dssp CEEEEEEECCCCSTTTHHHHHHHHHHSSSCCCEEEEGGGTEEEEEECTTTCCHHHHHHHHH-HHCCCEEECC
T ss_pred cEEEEEEECCccCHHHHHHHHHHHhcCCCeEEEEEEccCCEEEEEECCCCCCHHHHHHHHH-HCCCceEecC
Confidence 46778999 99999999999999999999999999999999999864 57789999999 9999987754
No 23
>1fvq_A Copper-transporting ATPase; APO-CCC2A, hydrolase; NMR {Saccharomyces cerevisiae} SCOP: d.58.17.1 PDB: 1fvs_A 2ggp_B
Probab=99.18 E-value=1.3e-10 Score=75.72 Aligned_cols=65 Identities=22% Similarity=0.409 Sum_probs=59.1
Q ss_pred EEEEEE-cCcChhHHHHHHHHHhcCCCceEEEeecCCCEEEEEee--CCHHHHHHHHHHhcCCceEEcC
Q 039645 61 TVEIKI-KMDCEGCERRVKKSVEGMKGVTQVEVDPKQSKLTVIGY--VDPDKVLERVRHRTGKKAEFWP 126 (188)
Q Consensus 61 ~v~l~V-gM~C~~C~~kV~kaL~~l~GV~~v~vd~~~~~v~V~~~--v~~~~I~~~I~~~~G~~a~l~~ 126 (188)
+..|+| ||+|.+|+.+|+++|.+++||.++.+|+..+++.|.++ .+.+++.+.|+ +.||.+.++.
T Consensus 3 ~~~~~v~gm~C~~c~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~i~~~i~-~~G~~~~~~~ 70 (72)
T 1fvq_A 3 EVILAVHGMTCSACTNTINTQLRALKGVTKCDISLVTNECQVTYDNEVTADSIKEIIE-DCGFDCEILR 70 (72)
T ss_dssp EEEEEECSCCSHHHHHHHHHHHHTSSSEEEECCBTTTTEEEEEECTTSCHHHHHHHHH-HHTCCEEEEE
T ss_pred EEEEEECCeecHHHHHHHHHHHhcCCCeEEEEEEecCCEEEEEECCCCCHHHHHHHHH-HCCCceEEcc
Confidence 457999 99999999999999999999999999999999999864 56788999999 9999988764
No 24
>2kt2_A Mercuric reductase; nmera, MERA, HMA domain, mercuric resist metal-binding, oxidoreductase; NMR {Pseudomonas aeruginosa} PDB: 2kt3_A
Probab=99.18 E-value=1e-10 Score=75.85 Aligned_cols=62 Identities=27% Similarity=0.426 Sum_probs=56.4
Q ss_pred EEEE-cCcChhHHHHHHHHHhcCCCceEEEeecCCCEEEEEee--CCHHHHHHHHHHhcCCceEEc
Q 039645 63 EIKI-KMDCEGCERRVKKSVEGMKGVTQVEVDPKQSKLTVIGY--VDPDKVLERVRHRTGKKAEFW 125 (188)
Q Consensus 63 ~l~V-gM~C~~C~~kV~kaL~~l~GV~~v~vd~~~~~v~V~~~--v~~~~I~~~I~~~~G~~a~l~ 125 (188)
+|.| ||+|.+|+.+|+++|.+++||.++++|+..++++|..+ .+.+++.+.|+ ++||.+.+.
T Consensus 3 ~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~i~~~i~-~~Gy~~~~~ 67 (69)
T 2kt2_A 3 HLKITGMTCDSCAAHVKEALEKVPGVQSALVSYPKGTAQLAIVPGTSPDALTAAVA-GLGYKATLA 67 (69)
T ss_dssp CEEEESSCSTHHHHHHHHHHHHSTTEEEEEEETTTTEEEEEECTTSCHHHHHHHHH-TTTSEEECC
T ss_pred EEEECCcccHHHHHHHHHHHHcCCCeeEEEEEccCCEEEEEECCCCCHHHHHHHHH-HCCCceEeC
Confidence 4889 99999999999999999999999999999999999864 57889999999 999987654
No 25
>1yg0_A COP associated protein; open-faced beta-sandwich, missing C-terminal beta-sheet, Met transport; NMR {Helicobacter pylori}
Probab=99.16 E-value=1.4e-10 Score=74.15 Aligned_cols=61 Identities=18% Similarity=0.392 Sum_probs=55.1
Q ss_pred EEEEEE-cCcChhHHHHHHHHHhcCCCceEEEeecCCCEEEEEee--CCHHHHHHHHHHhcCCce
Q 039645 61 TVEIKI-KMDCEGCERRVKKSVEGMKGVTQVEVDPKQSKLTVIGY--VDPDKVLERVRHRTGKKA 122 (188)
Q Consensus 61 ~v~l~V-gM~C~~C~~kV~kaL~~l~GV~~v~vd~~~~~v~V~~~--v~~~~I~~~I~~~~G~~a 122 (188)
+.+|.| ||+|.+|+.+|+++|.+++||..+.+|+.+++++|.++ .+.+++.+.|+ ++||.+
T Consensus 2 ~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~i~~~i~-~~G~~~ 65 (66)
T 1yg0_A 2 KATFQVPSITCNHCVDKIEKFVGEIEGVSFIDVSVEKKSVVVEFDAPATQDLIKEALL-DAGQEV 65 (66)
T ss_dssp EEEECCTTCSCSHHHHHHHHHHTTSSSEEEEEEETTTTEEEEEECTTCCHHHHHHHHH-HHTCCC
T ss_pred eEEEEECCcccHHHHHHHHHHHhcCCCceEEEEEcCCCEEEEEECCCCCHHHHHHHHH-HcCCCc
Confidence 346899 99999999999999999999999999999999999864 47788999999 999864
No 26
>1jww_A Potential copper-transporting ATPase; beta-alpha-beta-BETA-alpha-beta, hydrolase; NMR {Bacillus subtilis} SCOP: d.58.17.1 PDB: 2voy_A 1kqk_A
Probab=99.15 E-value=1.7e-10 Score=76.76 Aligned_cols=67 Identities=24% Similarity=0.380 Sum_probs=60.4
Q ss_pred ceEEEEEE-cCcChhHHHHHHHHHhcCCCceEEEeecCCCEEEEEee---CCHHHHHHHHHHhcCCceEEcC
Q 039645 59 LQTVEIKI-KMDCEGCERRVKKSVEGMKGVTQVEVDPKQSKLTVIGY---VDPDKVLERVRHRTGKKAEFWP 126 (188)
Q Consensus 59 ~~~v~l~V-gM~C~~C~~kV~kaL~~l~GV~~v~vd~~~~~v~V~~~---v~~~~I~~~I~~~~G~~a~l~~ 126 (188)
|.+..|.| ||+|.+|+.+|+++|.+++||..+.+|+..+++.|..+ .+.+++.+.|+ ++||.+.++.
T Consensus 2 m~~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~-~~G~~~~~~~ 72 (80)
T 1jww_A 2 TEKAEFDIEGMTCAACANRIEKRLNKIEGVANAPVNFALETVTVEYNPKEASVSDLKEAVD-KLGYKLKLKG 72 (80)
T ss_dssp CEEEEEEEESCCCHHHHHHHHHHHHTSTTEEECCCCSSSSEEEEEECTTTCCHHHHHHHHH-HHTSEEEECC
T ss_pred ceEEEEEECCccCHHHHHHHHHHHhcCCCeEEEEEEecCCEEEEEECCCCCCHHHHHHHHH-HcCCeEEecC
Confidence 45678999 99999999999999999999999999999999999864 57888999999 9999988765
No 27
>2ldi_A Zinc-transporting ATPase; metal homeostasis, metallochaperones, hydrolase; NMR {Synechocystis SP}
Probab=99.15 E-value=1.5e-10 Score=74.64 Aligned_cols=64 Identities=27% Similarity=0.484 Sum_probs=57.3
Q ss_pred ceEEEEEE-cCcChhHHHHHHHHHhcCCCceEEEeecCCCEEEEEee---CCHHHHHHHHHHhcCCceE
Q 039645 59 LQTVEIKI-KMDCEGCERRVKKSVEGMKGVTQVEVDPKQSKLTVIGY---VDPDKVLERVRHRTGKKAE 123 (188)
Q Consensus 59 ~~~v~l~V-gM~C~~C~~kV~kaL~~l~GV~~v~vd~~~~~v~V~~~---v~~~~I~~~I~~~~G~~a~ 123 (188)
+.+..|+| ||+|.+|+.+|+++|.+++||..+.+|+..+++.|..+ .+.+++.+.++ ++||.+.
T Consensus 2 ~~~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~-~~G~~~~ 69 (71)
T 2ldi_A 2 LKTQQMQVGGMRCAACASSIERALERLKGVAEASVTVATGRLTVTYDPKQVSEITIQERIA-ALGYTLA 69 (71)
T ss_dssp CEEEEEEEETCTTSGGGHHHHTGGGGCSSEEEEEEETTTTEEEEEECTTTCCTHHHHHHHH-TTTCEEE
T ss_pred cEEEEEEECCccCHHHHHHHHHHHhcCCCeeEEEEEecCCEEEEEECCCCCCHHHHHHHHH-HcCCCcc
Confidence 45668999 99999999999999999999999999999999999864 56788999999 9999764
No 28
>2kkh_A Putative heavy metal transporter; zinc transport, metal binding, metal selectivity, ferredoxin fold, ATP-binding, hydrolase; NMR {Arabidopsis thaliana}
Probab=99.15 E-value=4.3e-10 Score=78.54 Aligned_cols=73 Identities=15% Similarity=0.204 Sum_probs=64.3
Q ss_pred ccCCceEEEEEE-cCcChhHHHHHHHHHhcCCCceEEEeecCCCEEEEEee---CCHHHHHHHHHHhcCCceEEcCCC
Q 039645 55 KRKQLQTVEIKI-KMDCEGCERRVKKSVEGMKGVTQVEVDPKQSKLTVIGY---VDPDKVLERVRHRTGKKAEFWPYV 128 (188)
Q Consensus 55 ~~~~~~~v~l~V-gM~C~~C~~kV~kaL~~l~GV~~v~vd~~~~~v~V~~~---v~~~~I~~~I~~~~G~~a~l~~~~ 128 (188)
....|.+..|.| ||+|.+|+.+|+++|.+++||..+.+|+..+++.|.++ ++.+.+.+.|+ ++||.+.+...+
T Consensus 11 ~~~~~~~~~~~v~gm~C~~C~~~ie~~l~~~~GV~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~-~~Gy~~~~~~~~ 87 (95)
T 2kkh_A 11 KVKKLQKSYFDVLGICCTSEVPIIENILKSLDGVKEYSVIVPSRTVIVVHDSLLISPFQIAKALN-EARLEANVRVNG 87 (95)
T ss_dssp CSSCSEEEEEEETTCCTTTTHHHHHHHHHHSSSEEEEEEETTTTEEEEEECTTTCCHHHHHHHHH-HHTCCEEESCCC
T ss_pred cccceEEEEEEECCcCCHHHHHHHHHHHhcCCCeeEEEEEccCCEEEEEECCCCCCHHHHHHHHH-HcCCceEEecCC
Confidence 334577889999 99999999999999999999999999999999999864 47888999999 999998877643
No 29
>2kyz_A Heavy metal binding protein; structural genomics, PSI-biology, protein structure initiative, joint for structural genomics, JCSG; NMR {Thermotoga maritima}
Probab=99.12 E-value=1.1e-10 Score=75.96 Aligned_cols=60 Identities=25% Similarity=0.426 Sum_probs=54.5
Q ss_pred EEEEE-cCcChhHHHHHHHHHhcCCCceEEEeecCCCEEEEEeeCCHHHHHHHHHHhcCCceEE
Q 039645 62 VEIKI-KMDCEGCERRVKKSVEGMKGVTQVEVDPKQSKLTVIGYVDPDKVLERVRHRTGKKAEF 124 (188)
Q Consensus 62 v~l~V-gM~C~~C~~kV~kaL~~l~GV~~v~vd~~~~~v~V~~~v~~~~I~~~I~~~~G~~a~l 124 (188)
..|.| ||+|.+|+.+|+++|.++ ||..+.+|+.+++++|.++.+ +++.+.|+ ++||.+..
T Consensus 3 ~~~~v~gm~C~~C~~~i~~~l~~~-gv~~~~v~~~~~~~~v~~~~~-~~i~~~i~-~~Gy~~~~ 63 (67)
T 2kyz_A 3 YVLYVPDISCNHCKMRISKALEEL-GVKNYEVSVEEKKVVVETENL-DSVLKKLE-EIDYPVES 63 (67)
T ss_dssp EEEECGGGGSHHHHHHHHHHHHHH-TCSEEEEETTTTEEEEECSCH-HHHHHHHH-TTTCCCCB
T ss_pred EEEEECCcCcHHHHHHHHHHHHHc-CCeEEEEECCCCEEEEEECCH-HHHHHHHH-HcCCceee
Confidence 46899 999999999999999999 999999999999999987655 88999999 99997654
No 30
>1yjr_A Copper-transporting ATPase 1; metallochaperone, protein-protein interaction, copper(I), metal homeostasis, structural proteomics in europe, spine; NMR {Homo sapiens} PDB: 1yjt_A 1yju_A 1yjv_A
Probab=99.11 E-value=2.6e-10 Score=74.84 Aligned_cols=65 Identities=15% Similarity=0.375 Sum_probs=57.7
Q ss_pred eEEEEEE-cCcChhHHHHHHHHHhcCCCceEEEeecCCCEEEEEee---CCHHHHHHHHHHhcCCceEEc
Q 039645 60 QTVEIKI-KMDCEGCERRVKKSVEGMKGVTQVEVDPKQSKLTVIGY---VDPDKVLERVRHRTGKKAEFW 125 (188)
Q Consensus 60 ~~v~l~V-gM~C~~C~~kV~kaL~~l~GV~~v~vd~~~~~v~V~~~---v~~~~I~~~I~~~~G~~a~l~ 125 (188)
.+..|+| ||+|.+|+.+|+++|.+++||..+.+|+..++++|.++ ++.+++.+.|+ ++||.+.+.
T Consensus 4 ~~~~~~v~gm~C~~c~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~-~~G~~~~~~ 72 (75)
T 1yjr_A 4 GVLELVVRGMTCASCVHKIESSLTKHRGILYCSVALATNKAHIKYDPEIIGPRDIIHTIE-SLGFEPSLV 72 (75)
T ss_dssp CCEEEEEETCCTTTHHHHHHHHHTTSTTEEEEEEETTTTEEEEEECTTTTHHHHHHHHHH-HHHCEEEES
T ss_pred eEEEEEECCcccHHHHHHHHHHHHcCCCEEEEEEEecCCEEEEEECCCCCCHHHHHHHHH-HcCCCceee
Confidence 3457999 99999999999999999999999999999999999865 45678999999 999987654
No 31
>2ofg_X Zinc-transporting ATPase; ferredoxin-like fold, beta-alpha-beta-BETA-alpha-beta, struc genomics, hydrolase, membrane protein; NMR {Synechocystis SP} PDB: 2ofh_X
Probab=99.10 E-value=4.5e-10 Score=81.30 Aligned_cols=66 Identities=29% Similarity=0.446 Sum_probs=60.0
Q ss_pred ceEEEEEE-cCcChhHHHHHHHHHhcCCCceEEEeecCCCEEEEEee---CCHHHHHHHHHHhcCCceEEc
Q 039645 59 LQTVEIKI-KMDCEGCERRVKKSVEGMKGVTQVEVDPKQSKLTVIGY---VDPDKVLERVRHRTGKKAEFW 125 (188)
Q Consensus 59 ~~~v~l~V-gM~C~~C~~kV~kaL~~l~GV~~v~vd~~~~~v~V~~~---v~~~~I~~~I~~~~G~~a~l~ 125 (188)
+.++.|+| ||+|.+|+.+|+++|++++||..+++|+.+++++|.++ ++.++|.+.|+ ++||.+...
T Consensus 7 ~~~~~l~v~Gm~C~~Ca~~Ie~~L~~~~GV~~v~v~~~~~~~~V~~~~~~~~~~~i~~~i~-~~Gy~~~~~ 76 (111)
T 2ofg_X 7 LKTQQMQVGGMDCTSCKLKIEGSLERLKGVAEASVTVATGRLTVTYDPKQVSEITIQERIA-ALGYTLAEP 76 (111)
T ss_dssp CEEEEEEESCCCGGGTHHHHHHHHTTSSSEEEEEEETTTTEEEEEECTTTCSHHHHHHHHH-TTTCCEECC
T ss_pred ceEEEEEECCcCCHHHHHHHHHHHHcCCCeeEEEEECCCCEEEEEECCCCCCHHHHHHHHH-HcCCeeeec
Confidence 57788999 99999999999999999999999999999999999865 57788999999 999987654
No 32
>2ew9_A Copper-transporting ATPase 2; copper trafficking, ferrodoxin-like fold, structural genomics, structural proteomics in europe, spine, hydrolase; NMR {Homo sapiens}
Probab=99.07 E-value=4.5e-10 Score=83.55 Aligned_cols=65 Identities=22% Similarity=0.388 Sum_probs=59.4
Q ss_pred eEEEEEE-cCcChhHHHHHHHHHhcCCCceEEEeecCCCEEEEEee---CCHHHHHHHHHHhcCCceEEc
Q 039645 60 QTVEIKI-KMDCEGCERRVKKSVEGMKGVTQVEVDPKQSKLTVIGY---VDPDKVLERVRHRTGKKAEFW 125 (188)
Q Consensus 60 ~~v~l~V-gM~C~~C~~kV~kaL~~l~GV~~v~vd~~~~~v~V~~~---v~~~~I~~~I~~~~G~~a~l~ 125 (188)
.++.|+| ||+|++|+.+|+++|++++||.++++|+.+++++|.++ ++.++|.+.|+ ++||++.++
T Consensus 80 ~~~~~~v~gm~C~~C~~~ie~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~-~~Gy~~~~~ 148 (149)
T 2ew9_A 80 GNIELTITGMTCASCVHNIESKLTRTNGITYASVALATSKALVKFDPEIIGPRDIIKIIE-EIGFHASLA 148 (149)
T ss_dssp SEEEEEEESCCSHHHHHHHHHHHHHSSSCCEEEEETTTTEEEEECCTTTSCHHHHHHHHH-HHTCEEECC
T ss_pred ceeEEEEEeccCHHHHHHHHHHHhcCCCeEEEEEEcCCCEEEEEECCCCCCHHHHHHHHH-hCCCceEec
Confidence 4678999 99999999999999999999999999999999999865 57899999999 999987654
No 33
>1p6t_A Potential copper-transporting ATPase; COPA, P-type ATPase, water-soluble region, beta-alpha-beta- beta-alpha-beta fold; NMR {Bacillus subtilis} SCOP: d.58.17.1 d.58.17.1 PDB: 2rml_A
Probab=99.05 E-value=7.2e-10 Score=82.89 Aligned_cols=67 Identities=24% Similarity=0.373 Sum_probs=61.4
Q ss_pred eEEEEEE-cCcChhHHHHHHHHHhcCCCceEEEeecCCCEEEEEee---CCHHHHHHHHHHhcCCceEEcCC
Q 039645 60 QTVEIKI-KMDCEGCERRVKKSVEGMKGVTQVEVDPKQSKLTVIGY---VDPDKVLERVRHRTGKKAEFWPY 127 (188)
Q Consensus 60 ~~v~l~V-gM~C~~C~~kV~kaL~~l~GV~~v~vd~~~~~v~V~~~---v~~~~I~~~I~~~~G~~a~l~~~ 127 (188)
.++.|.| ||+|.+|+.+|+++|.+++||.++++|+.+++++|.++ ++.++|.+.|+ ++||++.++..
T Consensus 74 ~~~~~~v~gm~C~~C~~~ie~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~-~~Gy~~~~~~~ 144 (151)
T 1p6t_A 74 EKAEFDIEGMTCAACANRIEKRLNKIEGVANAPVNFALETVTVEYNPKEASVSDLKEAVD-KLGYKLKLKGE 144 (151)
T ss_dssp EEEEEEESSCCSSSHHHHHHHHHTTSSSEEECCEETTTTEEEEEECTTTCCHHHHHHHHH-HHTCCEEESCS
T ss_pred cccEEEecCCCCHHHHHHHHHHHhcCCCceEEEEEccCCEEEEEECCCCCCHHHHHHHHH-HcCCCeEEcCc
Confidence 5678999 99999999999999999999999999999999999864 68899999999 99999887654
No 34
>1qup_A Superoxide dismutase 1 copper chaperone; two domains, beta-alpha-beta-BETA-alpha-beta and beta barrel; 1.80A {Saccharomyces cerevisiae} SCOP: b.1.8.1 d.58.17.1
Probab=99.02 E-value=1.4e-09 Score=88.61 Aligned_cols=70 Identities=23% Similarity=0.403 Sum_probs=63.8
Q ss_pred eEEEEEEcCcChhHHHHHHHHHhcCCCceEEEeecCCCEEEEEeeCCHHHHHHHHHHhcCCceEEcCCCCC
Q 039645 60 QTVEIKIKMDCEGCERRVKKSVEGMKGVTQVEVDPKQSKLTVIGYVDPDKVLERVRHRTGKKAEFWPYVPY 130 (188)
Q Consensus 60 ~~v~l~VgM~C~~C~~kV~kaL~~l~GV~~v~vd~~~~~v~V~~~v~~~~I~~~I~~~~G~~a~l~~~~p~ 130 (188)
.+++|+|.|+|.+|+.+|+++|++++||.++++|+.+++++|.+.+++++|.++|+ ++||++.++...+.
T Consensus 6 ~~~~l~V~MtC~~Ca~~IekaL~~l~GV~~v~Vnl~~~~v~V~~~~~~~~I~~aI~-~~Gy~a~~~~~~~~ 75 (222)
T 1qup_A 6 YEATYAIPMHCENCVNDIKACLKNVPGINSLNFDIEQQIMSVESSVAPSTIINTLR-NCGKDAIIRGAGKP 75 (222)
T ss_dssp EEEEEECCCCSTTHHHHHHHHHTTCTTEEEEEEETTTTEEEEEESSCHHHHHHHHH-HTTCCCEEECCSCT
T ss_pred eEEEEEEccccHHHHHHHHHHHhcCCCeeEEEEEcCCCEEEEeccCCHHHHHHHHH-HcCCccccccCCCc
Confidence 44568888999999999999999999999999999999999998889999999999 99999999876544
No 35
>2aj0_A Probable cadmium-transporting ATPase; ferrodoxin-like fold, beta-alpha-beta-BETA-alpha-beta, metal binding protein, hydrolase; NMR {Listeria monocytogenes} PDB: 2aj1_A
Probab=98.96 E-value=1.3e-09 Score=71.39 Aligned_cols=60 Identities=23% Similarity=0.514 Sum_probs=51.8
Q ss_pred eEEEEEE-cCcChhHHHHHHHHHhcCCCceEEEeecCCCEEEEEeeCCHHHHHHHHHHhcCCceEE
Q 039645 60 QTVEIKI-KMDCEGCERRVKKSVEGMKGVTQVEVDPKQSKLTVIGYVDPDKVLERVRHRTGKKAEF 124 (188)
Q Consensus 60 ~~v~l~V-gM~C~~C~~kV~kaL~~l~GV~~v~vd~~~~~v~V~~~v~~~~I~~~I~~~~G~~a~l 124 (188)
++..|.| ||+|.+|+.+|+++|.+++||.++++|+..++++|.++.+ .+.|+ ++||.+.+
T Consensus 3 ~~~~~~v~gm~C~~C~~~ie~~l~~~~gv~~~~v~~~~~~~~v~~~~~----~~~i~-~~Gy~~~~ 63 (71)
T 2aj0_A 3 EKTVYRVDGLSCTNCAAKFERNVKEIEGVTEAIVNFGASKITVTGEAS----IQQVE-QAGAFEHL 63 (71)
T ss_dssp CEEEEEEESCCCHHHHHHHHHHHHHSTTEEEEEECCSSEEEEEEESCC----HHHHH-HHHTTTTC
T ss_pred eEEEEEECCcccHHHHHHHHHHHHcCCCeEEEEEECCCCEEEEEecCc----HHHHH-HhCCCccc
Confidence 3567999 9999999999999999999999999999999999987654 45777 88986443
No 36
>2rop_A Copper-transporting ATPase 2; wilson protein, mobility, protein-protein interaction, alternative splicing, ATP-binding, copper transport cytoplasm; NMR {Homo sapiens}
Probab=98.95 E-value=3.9e-09 Score=83.43 Aligned_cols=67 Identities=22% Similarity=0.405 Sum_probs=60.3
Q ss_pred eEEEEEE-cCcChhHHHHHHHHHhcCCCceEEEeecCCCEEEEEee---CCHHHHHHHHHHhcCCceEEcCC
Q 039645 60 QTVEIKI-KMDCEGCERRVKKSVEGMKGVTQVEVDPKQSKLTVIGY---VDPDKVLERVRHRTGKKAEFWPY 127 (188)
Q Consensus 60 ~~v~l~V-gM~C~~C~~kV~kaL~~l~GV~~v~vd~~~~~v~V~~~---v~~~~I~~~I~~~~G~~a~l~~~ 127 (188)
.++.|+| ||+|.+|+.+|+++|.+++||..+.+|+..++++|.++ ++.++|.+.|+ ++||.+.++..
T Consensus 122 ~~~~l~v~Gm~C~~C~~~ie~~l~~~~GV~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~-~~Gy~~~~~~~ 192 (202)
T 2rop_A 122 STTLIAIAGMTCASCVHSIEGMISQLEGVQQISVSLAEGTATVLYNPAVISPEELRAAIE-DMGFEASVVSE 192 (202)
T ss_dssp EEEEEEESCCCSTHHHHHHHHHGGGSSSEEEEEEETTTTEEEEEECTTTCCHHHHHHHHH-HHTSCEEEC--
T ss_pred eEEEEEECCccCHHHHHHHHHHHHcCCCeEEEEEEccCCEEEEEECCCCCCHHHHHHHHH-HcCCceEEcCC
Confidence 5678999 99999999999999999999999999999999999864 57899999999 99999988754
No 37
>2ew9_A Copper-transporting ATPase 2; copper trafficking, ferrodoxin-like fold, structural genomics, structural proteomics in europe, spine, hydrolase; NMR {Homo sapiens}
Probab=98.91 E-value=5.8e-09 Score=77.45 Aligned_cols=67 Identities=19% Similarity=0.303 Sum_probs=60.3
Q ss_pred ceEEEEEE-cCcChhHHHHHHHHHhcCCCceEEEeecCCCEEEEEee---CCHHHHHHHHHHhcCCceEEcC
Q 039645 59 LQTVEIKI-KMDCEGCERRVKKSVEGMKGVTQVEVDPKQSKLTVIGY---VDPDKVLERVRHRTGKKAEFWP 126 (188)
Q Consensus 59 ~~~v~l~V-gM~C~~C~~kV~kaL~~l~GV~~v~vd~~~~~v~V~~~---v~~~~I~~~I~~~~G~~a~l~~ 126 (188)
|+++.|.| ||+|.+|+.+|+++|.+++||.++.+++.++++.|..+ .+.+++.+.|+ +.||.+.+..
T Consensus 3 ~~~~~~~v~gm~C~~C~~~ie~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~-~~G~~~~~~~ 73 (149)
T 2ew9_A 3 PQKCFLQIKGMTCASCVSNIERNLQKEAGVLSVLVALMAGKAEIKYDPEVIQPLEIAQFIQ-DLGFEAAVME 73 (149)
T ss_dssp CEEEEEEEECCCSSSHHHHHHHHHHTTSSCCCEEEETTTTEEEEEECTTTCCHHHHHHHHH-HHTCEEEECS
T ss_pred cEEEEEEECCeecHHHHHHHHHHHhcCCCcEEEEEEecCCEEEEEEcCCCCCHHHHHHHHh-cCCCceEeec
Confidence 57789999 99999999999999999999999999999999999763 56788999999 9999887643
No 38
>1jk9_B CCS, copper chaperone for superoxide dismutase; protein-protein complex, heterodimer, metallochaperone, amyotrophic lateral sclerosis; 2.90A {Saccharomyces cerevisiae} SCOP: b.1.8.1 d.58.17.1
Probab=98.90 E-value=5.3e-09 Score=86.67 Aligned_cols=70 Identities=23% Similarity=0.403 Sum_probs=63.5
Q ss_pred eEEEEEEcCcChhHHHHHHHHHhcCCCceEEEeecCCCEEEEEeeCCHHHHHHHHHHhcCCceEEcCCCCC
Q 039645 60 QTVEIKIKMDCEGCERRVKKSVEGMKGVTQVEVDPKQSKLTVIGYVDPDKVLERVRHRTGKKAEFWPYVPY 130 (188)
Q Consensus 60 ~~v~l~VgM~C~~C~~kV~kaL~~l~GV~~v~vd~~~~~v~V~~~v~~~~I~~~I~~~~G~~a~l~~~~p~ 130 (188)
.+++|+|.|+|.+|+.+|+++|++++||.++++|+.+++++|.+..++++|.++|+ ++||++.+++..+.
T Consensus 7 ~~~~l~V~MtC~~Ca~~IekaL~~l~GV~~v~Vnl~~~~v~V~~~~~~~~I~~aIe-~~Gy~a~~~~~~~~ 76 (249)
T 1jk9_B 7 YEATYAIPMHCENCVNDIKACLKNVPGINSLNFDIEQQIMSVESSVAPSTIINTLR-NCGKDAIIRGAGKP 76 (249)
T ss_dssp EEEEEECCCCSSSHHHHHHHHHTTCTTEEEEEEETTTTEEEEEESSCHHHHHHHHH-TTTCCCEEEEESST
T ss_pred eeEEEEEeeccHHHHHHHHHHHhccCCeeEEEEEcCCCeEEEecCCCHHHHHHHHH-HhCCCcccccCCcc
Confidence 45578888999999999999999999999999999999999998889999999999 99999988776544
No 39
>1p6t_A Potential copper-transporting ATPase; COPA, P-type ATPase, water-soluble region, beta-alpha-beta- beta-alpha-beta fold; NMR {Bacillus subtilis} SCOP: d.58.17.1 d.58.17.1 PDB: 2rml_A
Probab=98.60 E-value=1.8e-07 Score=69.60 Aligned_cols=63 Identities=22% Similarity=0.489 Sum_probs=55.8
Q ss_pred ceEEEEEE-cCcChhHHHHHHHHHhcCCCceEEEeecCCCEEEEEee---CCHHHHHHHHHHhcCCce
Q 039645 59 LQTVEIKI-KMDCEGCERRVKKSVEGMKGVTQVEVDPKQSKLTVIGY---VDPDKVLERVRHRTGKKA 122 (188)
Q Consensus 59 ~~~v~l~V-gM~C~~C~~kV~kaL~~l~GV~~v~vd~~~~~v~V~~~---v~~~~I~~~I~~~~G~~a 122 (188)
+.+..|.| ||+|.+|+.+|+++|.+++||..+.+++..+++.|..+ .+.+++.+.++ +.||.+
T Consensus 5 ~~~~~~~v~gm~C~~C~~~ie~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~-~~G~~~ 71 (151)
T 1p6t_A 5 QKEIAMQVSGMTCAACAARIEKGLKRMPGVTDANVNLATETVNVIYDPAETGTAAIQEKIE-KLGYHV 71 (151)
T ss_dssp CEEEEEEEESCCSSHHHHHHHHHHTTSSSEEEEEEEGGGTEEEEEECTTTSCHHHHHHHHH-HHTCEE
T ss_pred ceEEEEEECCCcCHHHHHHHHHHHhcCCCeeEEEEEccCCEEEEEEcCCcCCHHHHHHHHH-HcCCcc
Confidence 35567999 99999999999999999999999999999999998754 56788999998 999864
No 40
>2rop_A Copper-transporting ATPase 2; wilson protein, mobility, protein-protein interaction, alternative splicing, ATP-binding, copper transport cytoplasm; NMR {Homo sapiens}
Probab=98.59 E-value=1e-07 Score=75.17 Aligned_cols=65 Identities=17% Similarity=0.354 Sum_probs=56.1
Q ss_pred CceEEEEEE-cCcChhHHHHHHHHHhcCCCceEEEeecCCCEEEEEee---CCHHHHHHHHHHhc---CCceE
Q 039645 58 QLQTVEIKI-KMDCEGCERRVKKSVEGMKGVTQVEVDPKQSKLTVIGY---VDPDKVLERVRHRT---GKKAE 123 (188)
Q Consensus 58 ~~~~v~l~V-gM~C~~C~~kV~kaL~~l~GV~~v~vd~~~~~v~V~~~---v~~~~I~~~I~~~~---G~~a~ 123 (188)
.+.++.|.| ||+|.+|+.+|+++|.+++||..+.+++..++++|.++ ++.+++.+.|+ ++ ||.+.
T Consensus 18 ~~~~~~l~v~Gm~C~~C~~~ie~~l~~~~GV~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~-~~~~gg~~v~ 89 (202)
T 2rop_A 18 HVVTLQLRIDGMHCKSCVLNIEENIGQLLGVQSIQVSLENKTAQVKYDPSCTSPVALQRAIE-ALPPGNFKVS 89 (202)
T ss_dssp --CEEEEEEESGGGSTHHHHHHHHTTSBTTEEEEEEETTTTEEEEEECTTTCCHHHHHHHHT-TSSSSCSEEE
T ss_pred ccEEEEEEECCeEcHHHHHHHHHHHhcCCCeEEEEEEecCCEEEEEECCCCCCHHHHHHHHH-HhccCCeEEE
Confidence 456778999 99999999999999999999999999999999999864 57788999998 88 35554
No 41
>3j09_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus}
Probab=98.50 E-value=2.5e-07 Score=86.74 Aligned_cols=64 Identities=16% Similarity=0.269 Sum_probs=58.2
Q ss_pred EEEEEE-cCcChhHHHHHHHHHhcCCCceEEEeecCCCEEEEEee---CCHHHHHHHHHHhcCCceEEc
Q 039645 61 TVEIKI-KMDCEGCERRVKKSVEGMKGVTQVEVDPKQSKLTVIGY---VDPDKVLERVRHRTGKKAEFW 125 (188)
Q Consensus 61 ~v~l~V-gM~C~~C~~kV~kaL~~l~GV~~v~vd~~~~~v~V~~~---v~~~~I~~~I~~~~G~~a~l~ 125 (188)
+++|+| ||+|++|+.+|+++|++++||.++++|+.+++++|.++ ++.+++.++|+ +.||++...
T Consensus 3 ~~~l~V~GM~Ca~Ca~~Ie~~L~~~~GV~~v~Vnl~~~~~~V~~d~~~~~~~~i~~ai~-~~Gy~~~~~ 70 (723)
T 3j09_A 3 ERTVRVTGMTCAMCVKSIETAVGSLEGVEEVRVNLATETAFIRFDEKRIDFETIKRVIE-DLGYGVVDE 70 (723)
T ss_dssp CEEEEEETCCSHHHHHHHHHHHHTSTTEEEEEEETTTTEEEEEECTTTCCHHHHHHHHH-HHCCEESSC
T ss_pred eEEEEeCCCCchHHHHHHHHHHhcCCCceEEEEEcCCCEEEEEeCCCcCCHHHHHHHHH-hcCCccccc
Confidence 357999 99999999999999999999999999999999999864 68899999999 999987543
No 42
>3bpd_A Uncharacterized protein; heptamer, Mg+2 ION, PSI-2, NYSGXRC, structural genom protein structure initiative; 2.80A {Archaeoglobus fulgidus dsm 4304} SCOP: d.58.61.1
Probab=81.05 E-value=3.7 Score=28.79 Aligned_cols=66 Identities=14% Similarity=0.222 Sum_probs=46.7
Q ss_pred ceEEEEEE-cCcChhHHHHHHHHHhcCCCceEEEe-----ecCCCEE--EEEee-CCHHHHHHHHHHhcCCceEEcC
Q 039645 59 LQTVEIKI-KMDCEGCERRVKKSVEGMKGVTQVEV-----DPKQSKL--TVIGY-VDPDKVLERVRHRTGKKAEFWP 126 (188)
Q Consensus 59 ~~~v~l~V-gM~C~~C~~kV~kaL~~l~GV~~v~v-----d~~~~~v--~V~~~-v~~~~I~~~I~~~~G~~a~l~~ 126 (188)
+.++.|.| ..+-+.- -.+-+.|.+++||..|++ |..+..+ +|+|+ ++.+++.++|+ +.|-.+..+.
T Consensus 6 iRRlVLDVlKPh~P~i-vdlA~~l~~~~gV~gVnItV~EvD~eTe~lkItIEG~dIdfd~I~~~IE-~~GgvIHSID 80 (100)
T 3bpd_A 6 LRRLVLDVLKPHEPKT-IVFALKLSELENVDGVNIHLSEIDQATENIKITILGNNLDYEQIKGVIE-DMGGVIHSVD 80 (100)
T ss_dssp EEEEEEEEEEESCSCH-HHHHHHHHTSTTEEEEEEEEEEECSSEEEEEEEEEEEEECHHHHHHHHH-TTTCEEEEEE
T ss_pred ceEEEEEecCCCCCCH-HHHHHHHHhCCCcceEEEEEEEeeccccEEEEEEEecCCCHHHHHHHHH-HcCCeEEeee
Confidence 45667777 4444443 456778999999987765 4445544 55665 99999999999 9997766554
No 43
>2x3d_A SSO6206; unknown function; 2.70A {Sulfolobus solfataricus}
Probab=79.28 E-value=4.9 Score=28.02 Aligned_cols=65 Identities=12% Similarity=0.230 Sum_probs=45.0
Q ss_pred eEEEEEE--cCcChhHHHHHHHHHhcCCCceEEEe-----ecCCCEE--EEEee-CCHHHHHHHHHHhcCCceEEcC
Q 039645 60 QTVEIKI--KMDCEGCERRVKKSVEGMKGVTQVEV-----DPKQSKL--TVIGY-VDPDKVLERVRHRTGKKAEFWP 126 (188)
Q Consensus 60 ~~v~l~V--gM~C~~C~~kV~kaL~~l~GV~~v~v-----d~~~~~v--~V~~~-v~~~~I~~~I~~~~G~~a~l~~ 126 (188)
.++.|.| .++-+.= -.+-+.|.+++||..|++ |..+..+ +|+|. ++.+++.++|+ +.|-.++.+.
T Consensus 5 rRlVLDVlKP~h~P~i-vd~A~~l~~~~gV~gVnItv~EvD~eTe~lkItIEG~~idfd~I~~~IE-~~Gg~IHSID 79 (96)
T 2x3d_A 5 RRLVLDVLKPIRGTSI-VDLAERISKLDGVEGVNISVTDMDVETMGLMIIIEGTSLNFDDIRKMLE-EEGCAIHSID 79 (96)
T ss_dssp EEEEEEEEEESSSSCH-HHHHHHHHTSTTEEEEEEEEEEECSSEEEEEEEEEESSCCHHHHHHHHH-HTTCEEEEEE
T ss_pred EEEEEEcccCCCCCCH-HHHHHHHHhCCCcceEEEEEEEeeccccEEEEEEEecCCCHHHHHHHHH-HcCCeEEeee
Confidence 4555666 3344444 356677999999987765 4445544 55675 99999999999 9997766543
No 44
>2raq_A Conserved protein MTH889; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; 3.11A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: d.58.61.1
Probab=77.48 E-value=4.7 Score=28.19 Aligned_cols=66 Identities=20% Similarity=0.272 Sum_probs=46.7
Q ss_pred ceEEEEEE-cCcChhHHHHHHHHHhcCCCceEEEe-----ecCCCEE--EEEee-CCHHHHHHHHHHhcCCceEEcC
Q 039645 59 LQTVEIKI-KMDCEGCERRVKKSVEGMKGVTQVEV-----DPKQSKL--TVIGY-VDPDKVLERVRHRTGKKAEFWP 126 (188)
Q Consensus 59 ~~~v~l~V-gM~C~~C~~kV~kaL~~l~GV~~v~v-----d~~~~~v--~V~~~-v~~~~I~~~I~~~~G~~a~l~~ 126 (188)
+.++.|.| .-+-+.= -.+-+.|.+++||..|++ |..+..+ +|+|. ++.+++.++|+ +.|-.++.+.
T Consensus 6 irRlVLDVlKPh~p~i-~d~A~~l~~~~gV~gVnItv~EvD~eTe~lkitiEG~~id~d~I~~~IE-~~Gg~IHSID 80 (97)
T 2raq_A 6 LIRIVLDILKPHEPII-PEYAKYLSELRGVEGVNITLMEIDKETENIKVTIQGNDLDFDEITRAIE-SYGGSIHSVD 80 (97)
T ss_dssp EEEEEEEEECCSCSCH-HHHHHHHHHSTTCCEEEEEEEEECSSCEEEEEEEECSSCCHHHHHHHHH-HTTCEEEEEE
T ss_pred ceEEEEEecCCCCCCH-HHHHHHHHhCCCcceEEEEEEEeeccccEEEEEEEecCCCHHHHHHHHH-HcCCeEEeee
Confidence 46677777 4444443 456677889999887765 4556555 45565 99999999999 9997766554
No 45
>3cq1_A Putative uncharacterized protein TTHB138; DTDP-4-keto-L-rhamnose reductase, plasmid, oxidoreductase, structural genomics, NPPSFA; 1.90A {Thermus thermophilus} PDB: 2cu6_A 3cq2_A 3cq3_A*
Probab=76.22 E-value=3.8 Score=28.36 Aligned_cols=35 Identities=23% Similarity=0.566 Sum_probs=27.3
Q ss_pred EEEEEEcCcChhH------HHHHHHHHhcCCCceEEEeecC
Q 039645 61 TVEIKIKMDCEGC------ERRVKKSVEGMKGVTQVEVDPK 95 (188)
Q Consensus 61 ~v~l~VgM~C~~C------~~kV~kaL~~l~GV~~v~vd~~ 95 (188)
.+.+.+.+++++| ...|+.+|.+++||.++++++.
T Consensus 42 ~V~v~l~lt~~~cp~~~~l~~~i~~al~~l~gv~~V~V~l~ 82 (103)
T 3cq1_A 42 RAYVRMTLTTPGCPLHDSLGEAVRQALSRLPGVEEVEVEVT 82 (103)
T ss_dssp EEEEEECCSSSSCCSSCHHHHHHHHHHHTSTTCCEEEEEEC
T ss_pred EEEEEEEECCCCCcHHHHHHHHHHHHHHhCCCceeEEEEEe
Confidence 4566667778777 5678999999999998887643
No 46
>3lvj_C Sulfurtransferase TUSA; protein-protein complex, structural genomics, montreal-kings bacterial structural genomics initiative, BSGI; HET: PLP; 2.44A {Escherichia coli} SCOP: d.68.3.3 PDB: 3lvk_B* 1dcj_A
Probab=71.67 E-value=16 Score=24.00 Aligned_cols=55 Identities=13% Similarity=0.090 Sum_probs=40.2
Q ss_pred EEEEE-cCcChhHHHHHHHHHhcCCCceEEEeecCCCEEEEEee--CCHHHHHHHHHHhcCCceEEcC
Q 039645 62 VEIKI-KMDCEGCERRVKKSVEGMKGVTQVEVDPKQSKLTVIGY--VDPDKVLERVRHRTGKKAEFWP 126 (188)
Q Consensus 62 v~l~V-gM~C~~C~~kV~kaL~~l~GV~~v~vd~~~~~v~V~~~--v~~~~I~~~I~~~~G~~a~l~~ 126 (188)
.++.. |+.|+.-.-+++++|.+++. .+.+.|..+ ...+.|.+.++ +.|+++....
T Consensus 11 ~~lD~rGl~CP~Pvl~~kkal~~l~~---------G~~l~V~~dd~~a~~di~~~~~-~~G~~~~~~~ 68 (82)
T 3lvj_C 11 HTLDALGLRCPEPVMMVRKTVRNMQP---------GETLLIIADDPATTRDIPGFCT-FMEHELVAKE 68 (82)
T ss_dssp EEEECTTCCTTHHHHHHHHHHHTSCT---------TCEEEEEECCTTHHHHHHHHHH-HTTCEEEEEE
T ss_pred EEEECCCCCCCHHHHHHHHHHHhCCC---------CCEEEEEECCccHHHHHHHHHH-HCCCEEEEEE
Confidence 46888 99999999999999998732 123333332 44567888888 9999876653
No 47
>1uwd_A Hypothetical protein TM0487; similar to PAAD protein, alpha/beta fold,structural genomics joint center for structural genomics, JCSG; NMR {Thermotoga maritima} SCOP: d.52.8.2 PDB: 1wcj_A
Probab=70.82 E-value=5.9 Score=27.30 Aligned_cols=35 Identities=23% Similarity=0.470 Sum_probs=25.6
Q ss_pred EEEEEEcCcChhH------HHHHHHHHhcCCCceEEEeecC
Q 039645 61 TVEIKIKMDCEGC------ERRVKKSVEGMKGVTQVEVDPK 95 (188)
Q Consensus 61 ~v~l~VgM~C~~C------~~kV~kaL~~l~GV~~v~vd~~ 95 (188)
.+.+.+.+++++| ...|+.+|.+++||.++++++.
T Consensus 43 ~V~v~l~lt~~~cp~~~~l~~~i~~al~~l~gv~~v~V~l~ 83 (103)
T 1uwd_A 43 NVKVLMTMTTPMCPLAGMILSDAEEAIKKIEGVNNVEVELT 83 (103)
T ss_dssp EEEEEECCSSSCCSSHHHHHHHHHHHHHTSSSCCEEEEEEC
T ss_pred EEEEEEEECCCCCcHHHHHHHHHHHHHHhCCCcceEEEEEe
Confidence 4556666666666 4568899999999998887643
No 48
>1jdq_A TM006 protein, hypothetical protein TM0983; structural genomics; NMR {Thermotoga maritima} SCOP: d.68.3.3
Probab=69.90 E-value=18 Score=24.91 Aligned_cols=55 Identities=16% Similarity=0.211 Sum_probs=41.1
Q ss_pred EEEEE-cCcChhHHHHHHHHHhcCCCceEEEeecCCCEEEEEee--CCHHHHHHHHHHhcCCceEEcC
Q 039645 62 VEIKI-KMDCEGCERRVKKSVEGMKGVTQVEVDPKQSKLTVIGY--VDPDKVLERVRHRTGKKAEFWP 126 (188)
Q Consensus 62 v~l~V-gM~C~~C~~kV~kaL~~l~GV~~v~vd~~~~~v~V~~~--v~~~~I~~~I~~~~G~~a~l~~ 126 (188)
.++.. |+.|+.-.-+++++|.+++. .+.+.|..+ ...+.|.+.++ +.|+.+....
T Consensus 27 ~~LD~rGl~CP~Pvl~tkkaL~~l~~---------Ge~L~Vl~dd~~a~~dI~~~~~-~~G~~v~~~e 84 (98)
T 1jdq_A 27 KTLDVRGEVCPVPDVETKRALQNMKP---------GEILEVWIDYPMSKERIPETVK-KLGHEVLEIE 84 (98)
T ss_dssp EEEECSSCCSSHHHHHHHHHHHTCCT---------TCEEEEEESSCTHHHHHHHHHH-HSSCCEEEEE
T ss_pred EEEeCCCCCCCHHHHHHHHHHHhCCC---------CCEEEEEECCccHHHHHHHHHH-HCCCEEEEEE
Confidence 56888 99999999999999998732 223444432 34578888888 9999886653
No 49
>2jsx_A Protein NAPD; TAT, proofreading, cytoplasm, chaperone; NMR {Escherichia coli K12} PDB: 2pq4_A
Probab=69.80 E-value=17 Score=24.89 Aligned_cols=45 Identities=11% Similarity=0.223 Sum_probs=31.9
Q ss_pred hhHHHHHHHHHhcCCCceEEEeecCCCEEEEEee-CCHHHHHHHHH
Q 039645 71 EGCERRVKKSVEGMKGVTQVEVDPKQSKLTVIGY-VDPDKVLERVR 115 (188)
Q Consensus 71 ~~C~~kV~kaL~~l~GV~~v~vd~~~~~v~V~~~-v~~~~I~~~I~ 115 (188)
++=...|..+|.+++|++-..++...+++.|+-+ .+.+++.+.|+
T Consensus 16 p~~~~~V~~~L~~ipgvEi~~~~~~~GkiVV~iEa~~~~~l~~~i~ 61 (95)
T 2jsx_A 16 SERISDISTQLNAFPGCEVAVSDAPSGQLIVVVEAEDSETLIQTIE 61 (95)
T ss_dssp TTSHHHHHHHHTTSTTEEEEEEETTTTEEEEEEEESSHHHHHHHHH
T ss_pred CCCHHHHHHHHHCCCCeEEEEecCCCCCEEEEEEeCCHHHHHHHHH
Confidence 4447899999999999955455666788877643 45666666555
No 50
>3hz7_A Uncharacterized protein; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 2.00A {Desulfitobacterium hafniense}
Probab=62.50 E-value=20 Score=24.00 Aligned_cols=54 Identities=17% Similarity=0.205 Sum_probs=39.7
Q ss_pred EEEE-cCcChhHHHHHHHHHhcCC-CceEEEeecCCCEEEEEee--CCHHHHHHHHHHhcCCceEEcC
Q 039645 63 EIKI-KMDCEGCERRVKKSVEGMK-GVTQVEVDPKQSKLTVIGY--VDPDKVLERVRHRTGKKAEFWP 126 (188)
Q Consensus 63 ~l~V-gM~C~~C~~kV~kaL~~l~-GV~~v~vd~~~~~v~V~~~--v~~~~I~~~I~~~~G~~a~l~~ 126 (188)
++.. |+.|+.-.-+++++|.+++ . .+.+.|..+ ...+.|.+.++ +.|+.+....
T Consensus 3 ~lD~rGl~CP~Pvl~~kkal~~l~~~---------G~~L~V~~dd~~a~~dI~~~~~-~~G~~v~~~~ 60 (87)
T 3hz7_A 3 TIDALGQVCPIPVIRAKKALAELGEA---------GGVVTVLVDNDISRQNLQKMAE-GMGYQSEYLE 60 (87)
T ss_dssp EEECTTCCTTHHHHHHHHHHHTTGGG---------CCEEEEEESSHHHHHHHHHHHH-HHTCEEEEEE
T ss_pred EEEcCCCCCCHHHHHHHHHHHhccCC---------CCEEEEEECCccHHHHHHHHHH-HCCCEEEEEE
Confidence 4778 9999999999999999883 2 123344432 44577888888 9999886654
No 51
>3lno_A Putative uncharacterized protein; alpha-beta fold, structural genomics, center for structural genomics of infectious diseases, csgid; 2.10A {Bacillus anthracis} SCOP: d.52.8.0
Probab=60.48 E-value=7.4 Score=27.15 Aligned_cols=35 Identities=29% Similarity=0.461 Sum_probs=25.5
Q ss_pred EEEEEEcCcChhH------HHHHHHHH-hcCCCceEEEeecC
Q 039645 61 TVEIKIKMDCEGC------ERRVKKSV-EGMKGVTQVEVDPK 95 (188)
Q Consensus 61 ~v~l~VgM~C~~C------~~kV~kaL-~~l~GV~~v~vd~~ 95 (188)
.+.+.+-++.++| ...|+.+| .+++||.++++++.
T Consensus 45 ~V~V~ltlt~p~cp~~~~i~~~i~~al~~~l~Gv~~V~V~l~ 86 (108)
T 3lno_A 45 NAVITMTMTSIGCPMAGQIVSDVKKVLSTNVPEVNEIEVNVV 86 (108)
T ss_dssp CEEEEECCSCTTCTTHHHHHHHHHHHHHHHCTTCCCEEEEEC
T ss_pred eEEEEEEECCCCCcHHHHHHHHHHHHHHHhCCCCceEEEEEE
Confidence 3555556666666 56788899 89999998877644
No 52
>1je3_A EC005, hypothetical 8.6 kDa protein in AMYA-FLIE intergenic region; mixed alpha-beta structure, structural genomics; NMR {Escherichia coli} SCOP: d.68.3.3
Probab=58.47 E-value=16 Score=25.12 Aligned_cols=55 Identities=11% Similarity=0.065 Sum_probs=39.9
Q ss_pred EEEEEE-cCcChhHHHHHHHHHhcCCCceEEEeecCCCEEEEEee--CCHHHHHHHHHHhcCCceEEc
Q 039645 61 TVEIKI-KMDCEGCERRVKKSVEGMKGVTQVEVDPKQSKLTVIGY--VDPDKVLERVRHRTGKKAEFW 125 (188)
Q Consensus 61 ~v~l~V-gM~C~~C~~kV~kaL~~l~GV~~v~vd~~~~~v~V~~~--v~~~~I~~~I~~~~G~~a~l~ 125 (188)
..++.+ |+.|+.-.-+++++|.+++. .+.+.|..+ ...+.|.+.++ +.|+.+...
T Consensus 27 ~~~LD~rGl~CP~PvlktkkaL~~l~~---------Ge~L~Vl~dd~~a~~dIp~~~~-~~G~~v~~~ 84 (97)
T 1je3_A 27 DYRLDMVGEPCPYPAVATLEAMPQLKK---------GEILEVVSDCPQSINNIPLDAR-NHGYTVLDI 84 (97)
T ss_dssp EEEECSBCCSSSSSTHHHHHHTTTCCS---------SCEEEEEEBCSSSSCHHHHHHH-HHTCSEEEE
T ss_pred CeEEeCCCCCCCHHHHHHHHHHHcCCC---------CCEEEEEECCcchHHHHHHHHH-HCCCEEEEE
Confidence 456888 99999999999999998742 122333322 34567888888 999987654
No 53
>1fvg_A Peptide methionine sulfoxide reductase; oxidoreductase; 1.60A {Bos taurus} SCOP: d.58.28.1 PDB: 1fva_A 2l90_A*
Probab=46.32 E-value=50 Score=25.84 Aligned_cols=52 Identities=17% Similarity=0.183 Sum_probs=35.8
Q ss_pred ceEEEEEEcCcChhHHHHHHHHHhcCCCceEEEeecCCCE-------------------EEEEee---CCHHHHHHHHH
Q 039645 59 LQTVEIKIKMDCEGCERRVKKSVEGMKGVTQVEVDPKQSK-------------------LTVIGY---VDPDKVLERVR 115 (188)
Q Consensus 59 ~~~v~l~VgM~C~~C~~kV~kaL~~l~GV~~v~vd~~~~~-------------------v~V~~~---v~~~~I~~~I~ 115 (188)
++++.|. .+|=.-++..+.+++||.++.+-+..+. |.|.++ ++-++|++..-
T Consensus 43 ~~~a~fa-----gGCFWg~E~~F~~l~GV~~t~vGYagG~~~nPtY~~Vcsg~TGHaEaV~V~yDp~~isy~~LL~~F~ 116 (199)
T 1fvg_A 43 TQMAVFG-----MGCFWGAERKFWTLKGVYSTQVGFAGGYTPNPTYKEVCSGKTGHAEVVRVVFQPEHISFEELLKVFW 116 (199)
T ss_dssp CEEEEEE-----ESSHHHHHHHHHTSTTEEEEEEEEESSSCSSCCHHHHHHTCSCCEEEEEEEECTTTSCHHHHHHHHH
T ss_pred ceEEEEe-----cCCeeeeHHHHhhCCCeEEEEeeccCCCCCCCChhheecCCCCCeEEEEEEECCCcCCHHHHHHHHH
Confidence 4555554 4566666777889999999999876654 455554 56677777665
No 54
>3bqh_A PILB, peptide methionine sulfoxide reductase MSRA/MSRB; methionine sulfoxide reductase A, oxidized form, elect transport; 1.95A {Neisseria meningitidis} PDB: 3bqe_A 3bqf_A* 3bqg_A
Probab=44.13 E-value=55 Score=25.47 Aligned_cols=45 Identities=16% Similarity=0.216 Sum_probs=32.7
Q ss_pred hhHHHHHHHHHhcCCCceEEEeecCCCE-------------------EEEEee---CCHHHHHHHHH
Q 039645 71 EGCERRVKKSVEGMKGVTQVEVDPKQSK-------------------LTVIGY---VDPDKVLERVR 115 (188)
Q Consensus 71 ~~C~~kV~kaL~~l~GV~~v~vd~~~~~-------------------v~V~~~---v~~~~I~~~I~ 115 (188)
.||=.-++..+.+++||.++.+-+..+. |.|.++ ++-++|++..-
T Consensus 9 gGCFWg~E~~F~~~~GV~~t~vGYagG~~~nPtY~~Vc~g~tGHaEaV~V~yDp~~isy~~LL~~f~ 75 (193)
T 3bqh_A 9 GGCFWGLEAYFQRIDGVVDAVSGYANGNTKNPSYEDVSYRHTGHAETVKVTYDADKLSLDDILQYFF 75 (193)
T ss_dssp ESCHHHHHHHHHTSTTEEEEEEEEESCSSSSCCHHHHHHSCCCCEEEEEEEEETTTCCHHHHHHHHH
T ss_pred cCCeeehHHHHhcCCCEEEEEEeccCCcCCCCChheeecCCCCCeEEEEEEECCCcCCHHHHHHHHH
Confidence 4566667777889999999999765543 556664 67788877664
No 55
>2j89_A Methionine sulfoxide reductase A; MSRA, poplar, oxidoreductase; 1.7A {Populus trichocarpa}
Probab=40.88 E-value=64 Score=26.31 Aligned_cols=45 Identities=24% Similarity=0.294 Sum_probs=32.6
Q ss_pred hhHHHHHHHHHhcCCCceEEEeecCCCE-------------------EEEEee---CCHHHHHHHHH
Q 039645 71 EGCERRVKKSVEGMKGVTQVEVDPKQSK-------------------LTVIGY---VDPDKVLERVR 115 (188)
Q Consensus 71 ~~C~~kV~kaL~~l~GV~~v~vd~~~~~-------------------v~V~~~---v~~~~I~~~I~ 115 (188)
.||=.-+|..+.+++||.++.+-+.++. |.|.++ ++-++|++..-
T Consensus 101 gGCFWgvE~~F~~l~GV~~t~vGYaGG~t~nPTYeeVcsG~TGHaEaV~V~YDP~~ISy~~LL~~Fw 167 (261)
T 2j89_A 101 AGCFWGVELAFQRVPGVTKTEVGYTQGLLHNPTYEDVCTGTTNHNEVVRVQYDPKECSFDTLIDVLW 167 (261)
T ss_dssp ESSHHHHHHHHHTSTTEEEEEEEEESSSCSSCCHHHHHTTCSCCEEEEEEEECTTTSCHHHHHHHHH
T ss_pred cCCeeeeHHHHhhCCCeEEEEeeecCCCCCCCChhhcccCCCCCeEEEEEEECCCcCCHHHHHHHHH
Confidence 4566667777889999999999876553 556654 66777777654
No 56
>4gwb_A Peptide methionine sulfoxide reductase MSRA 3; structural genomics, protein structure initiative, nysgrc, R PSI-biology; 1.20A {Sinorhizobium meliloti}
Probab=40.11 E-value=50 Score=25.13 Aligned_cols=45 Identities=18% Similarity=0.278 Sum_probs=34.4
Q ss_pred hhHHHHHHHHHhcCCCceEEEeecCCC---------------EEEEEee---CCHHHHHHHHH
Q 039645 71 EGCERRVKKSVEGMKGVTQVEVDPKQS---------------KLTVIGY---VDPDKVLERVR 115 (188)
Q Consensus 71 ~~C~~kV~kaL~~l~GV~~v~vd~~~~---------------~v~V~~~---v~~~~I~~~I~ 115 (188)
.||=.-++..+.+++||.++.+-+.++ .|.|+++ ++-++|++..-
T Consensus 9 gGCFWg~E~~f~~l~GV~~t~~GYagG~~~nPtY~~v~~HaE~V~V~yDp~~isy~~LL~~F~ 71 (168)
T 4gwb_A 9 GGCFWGMQDLIRKLPGVIETRVGYTGGDVPNATYRNHGTHAEGIEIIFDPERISYRRILELFF 71 (168)
T ss_dssp ESCHHHHHHHHTTSTTEEEEEEEEESSSCTTCBTTBCTTCEEEEEEEECTTTCCHHHHHHHHH
T ss_pred ccCccchHHHHhcCCCeEEEEEEcCCCcCCCCcccccCceEEEEEEEECCCCCCHHHHHHHHH
Confidence 467677788899999999999987665 4556665 77788887664
No 57
>1rkl_A Dolichyl-diphosphooligosaccharide--protein glycosyltransferase 4 kDa subunit; membrane protein; NMR {Synthetic} SCOP: f.23.30.1
Probab=39.52 E-value=11 Score=21.54 Aligned_cols=20 Identities=25% Similarity=0.331 Sum_probs=14.6
Q ss_pred ceeehhhhcchhHHHHHHHH
Q 039645 13 STIAFLRITSGYSLFAVIMG 32 (188)
Q Consensus 13 ~~~~~l~~~~~~~~~~~~m~ 32 (188)
.||.+|....|.+.|.++.+
T Consensus 5 ~qL~~lan~lG~~~~~LIvl 24 (36)
T 1rkl_A 5 EQLNSLAITFGIVMMTLIVI 24 (36)
T ss_dssp CGGGHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHH
Confidence 47788888888777766654
No 58
>1owx_A Lupus LA protein, SS-B, LA; RRM, transcription; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=38.71 E-value=1e+02 Score=21.84 Aligned_cols=56 Identities=5% Similarity=0.051 Sum_probs=44.4
Q ss_pred EEEEE-cCcCh-hHHHHHHHHHhcCCCceEEEeecCCCEEEEEeeCCHHHHHHHHHHhc
Q 039645 62 VEIKI-KMDCE-GCERRVKKSVEGMKGVTQVEVDPKQSKLTVIGYVDPDKVLERVRHRT 118 (188)
Q Consensus 62 v~l~V-gM~C~-~C~~kV~kaL~~l~GV~~v~vd~~~~~v~V~~~v~~~~I~~~I~~~~ 118 (188)
..+.| |+... .+...++..+++...|..|.+.....+..|.+..++++-.++++ ++
T Consensus 19 ~il~v~~l~~~~~sredLke~F~~~G~V~~Vd~~~g~~tgfVrf~~~~~~A~~av~-~l 76 (121)
T 1owx_A 19 CLLKFSGDLDDQTCREDLHILFSNHGEIKWIDFVRGAKEGIILFKEKAKEALGKAK-DA 76 (121)
T ss_dssp CEEEEEESCCSSCCHHHHHHHTCSSCCEEEEECCTTCSEEEEEESSCHHHHHHHHH-HT
T ss_pred eEEEEecCCCCcCCHHHHHHHHHhcCCEEEEEEecCCCEEEEEECCChHHHHHHHH-Hh
Confidence 45777 77777 78999999999998999999988888888888654566666776 54
No 59
>1ff3_A Peptide methionine sulfoxide reductase; alpha beta roll, PMSR, MSRA, oxidoreductase; 1.90A {Escherichia coli} SCOP: d.58.28.1 PDB: 2gt3_A 2iem_A
Probab=38.07 E-value=81 Score=24.86 Aligned_cols=45 Identities=11% Similarity=0.108 Sum_probs=31.9
Q ss_pred hhHHHHHHHHHhcCCCceEEEeecCCC-------------------EEEEEee---CCHHHHHHHHH
Q 039645 71 EGCERRVKKSVEGMKGVTQVEVDPKQS-------------------KLTVIGY---VDPDKVLERVR 115 (188)
Q Consensus 71 ~~C~~kV~kaL~~l~GV~~v~vd~~~~-------------------~v~V~~~---v~~~~I~~~I~ 115 (188)
.+|=.-++..+.+++||.++.+-+..+ .|.|.++ ++-++|++..-
T Consensus 49 gGCFWg~E~~F~~l~GV~~t~vGYaGG~~~nPtY~~VcsG~TGHaEaV~V~yDp~~isy~~LL~~F~ 115 (211)
T 1ff3_A 49 MGXFWGVERLFWQLPGVYSTAAGYTGGYTPNPTYREVCSGDTGHAEAVRIVYDPSVISYEQLLQVFW 115 (211)
T ss_dssp CSSHHHHHHHHHTSTTEEEEEEEEESSSCSSCCHHHHHHTCSCCEEEEEEEECTTTSCHHHHHHHHH
T ss_pred cCCeEEehhhHhcCCCeEEEEeeecCCCCCCCChhhccCCCCCceEEEEEEECCCcCCHHHHHHHHH
Confidence 455566677788999999999987644 2556654 67777777665
No 60
>3e0m_A Peptide methionine sulfoxide reductase MSRA/MSRB 1; fusion, msrab, linker, hinge, cell membrane, membrane, multifunctional enzyme, oxidoreductase; 2.40A {Streptococcus pneumoniae}
Probab=36.84 E-value=69 Score=26.84 Aligned_cols=45 Identities=20% Similarity=0.234 Sum_probs=33.9
Q ss_pred hhHHHHHHHHHhcCCCceEEEeecCCCE-----------------EEEEee---CCHHHHHHHHH
Q 039645 71 EGCERRVKKSVEGMKGVTQVEVDPKQSK-----------------LTVIGY---VDPDKVLERVR 115 (188)
Q Consensus 71 ~~C~~kV~kaL~~l~GV~~v~vd~~~~~-----------------v~V~~~---v~~~~I~~~I~ 115 (188)
.+|=.-++..+.+++||.++.+-+..+. |.|+++ ++-++|++..-
T Consensus 9 gGCFWg~E~~F~~l~GV~~t~~GYagG~~~nPtY~~Vc~TGHaEaV~V~yDp~~isy~~LL~~f~ 73 (313)
T 3e0m_A 9 GGCFWGLEEYFSRISGVLETSVGYANGQVETTNYQLLKETDHAETVQVIYDEKEVSLREILLYYF 73 (313)
T ss_dssp CSCHHHHHHHHTTSTTEEEEEEEEESCSSSCCCTTTHHHHTCEEEEEEEECTTTSCHHHHHHHHH
T ss_pred cCCchhhHHHHhhCCCeEEeecccCCCCCCCCChhhhccCCCeEEEEEEECCCcCCHHHHHHHHH
Confidence 5666777788999999999999876553 556664 77788877664
No 61
>1pav_A Hypothetical protein TA1170/TA1414; structural genomics, structure, fast NMR, semiautomated analysis; NMR {Thermoplasma acidophilum} SCOP: d.68.3.3
Probab=32.94 E-value=28 Score=22.39 Aligned_cols=52 Identities=13% Similarity=0.086 Sum_probs=37.2
Q ss_pred EEEE-cCcChhHHHHHHHHHhcCCCceEEEeecCCCEEEEEee--CCHHHHHHHHHHhcCCceEE
Q 039645 63 EIKI-KMDCEGCERRVKKSVEGMKGVTQVEVDPKQSKLTVIGY--VDPDKVLERVRHRTGKKAEF 124 (188)
Q Consensus 63 ~l~V-gM~C~~C~~kV~kaL~~l~GV~~v~vd~~~~~v~V~~~--v~~~~I~~~I~~~~G~~a~l 124 (188)
++.. |+.|+.=.-+++++|.+++.= +.+.|..+ ...+.|.+.++ +.|+....
T Consensus 8 ~lD~rGl~CP~Pvl~~k~al~~l~~G---------~~L~V~~dd~~a~~di~~~~~-~~G~~~~~ 62 (78)
T 1pav_A 8 VIDARGSYCPGPLMELIKAYKQAKVG---------EVISVYSTDAGTKKDAPAWIQ-KSGQELVG 62 (78)
T ss_dssp CCCBSSCSSCTTHHHHHHHHTTSCTT---------CCEECCBSSSCHHHHHHHHHH-HHTEEECC
T ss_pred EEECCCCCCCHHHHHHHHHHHcCCCC---------CEEEEEECCccHHHHHHHHHH-HCCCEEEE
Confidence 4778 999999999999999987421 22333322 34577888888 99987644
No 62
>2lat_A Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 4; membrane protein, oligosaccharyltransferase, integral membra protein; NMR {Homo sapiens}
Probab=30.31 E-value=16 Score=20.90 Aligned_cols=19 Identities=26% Similarity=0.382 Sum_probs=12.8
Q ss_pred eeehhhhcchhHHHHHHHH
Q 039645 14 TIAFLRITSGYSLFAVIMG 32 (188)
Q Consensus 14 ~~~~l~~~~~~~~~~~~m~ 32 (188)
||.+|-...|.+.|.++.+
T Consensus 6 qL~~lan~lG~~~~~LIVl 24 (37)
T 2lat_A 6 QLAIFANMLGVSLFLLVVL 24 (37)
T ss_dssp HHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHH
Confidence 6677777777776665554
No 63
>1nwa_A Peptide methionine sulfoxide reductase MSRA; oxidoreductase, product complex, structural genomics, PSI, protein structure initiative; 1.50A {Mycobacterium tuberculosis} SCOP: d.58.28.1
Probab=30.22 E-value=1.1e+02 Score=23.89 Aligned_cols=45 Identities=20% Similarity=0.225 Sum_probs=32.9
Q ss_pred hhHHHHHHHHHhcCCCceEEEeecCCC---------------EEEEEee---CCHHHHHHHHH
Q 039645 71 EGCERRVKKSVEGMKGVTQVEVDPKQS---------------KLTVIGY---VDPDKVLERVR 115 (188)
Q Consensus 71 ~~C~~kV~kaL~~l~GV~~v~vd~~~~---------------~v~V~~~---v~~~~I~~~I~ 115 (188)
.+|=.-++..+.+++||.++.+-+..+ .|.|.++ ++-++|++..-
T Consensus 32 gGCFWg~E~~F~~l~GV~~t~vGYaGG~~~nPtYe~~G~HaEaV~V~yDp~~iSy~~LL~~Ff 94 (203)
T 1nwa_A 32 GGCFWGLQDLIRNQPGVVSTRVGYSGGNIPNATYRNHGTHAEAVEIIFDPTVTDYRTLLEFFF 94 (203)
T ss_dssp ESCHHHHHHHHTTSTTEEEEEEEEESSSCSSCCSSCCTTCEEEEEEEECTTTCCHHHHHHHHH
T ss_pred cCCeeeeHHHHhcCCCeEEEEeeecCCCCCCCChhhcCCceEEEEEEECCCcCCHHHHHHHHH
Confidence 456666677789999999999987654 3556665 67788877664
Done!