BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 039646
(325 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9FL07|ATL46_ARATH RING-H2 finger protein ATL46 OS=Arabidopsis thaliana GN=ATL46 PE=2
SV=1
Length = 376
Score = 302 bits (773), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 169/329 (51%), Positives = 212/329 (64%), Gaps = 46/329 (13%)
Query: 12 SRISPVLLLILVIVAVVFFIFGLVHLLIRYLKKRPSPLPNHQSNRFPETT----LQTQLQ 67
+RISP +L ++VI+AV+FFI GL+HLL+R+L K PS + +SNRFPE + LQ QLQ
Sbjct: 39 NRISPAVLFVIVILAVLFFISGLLHLLVRFLIKHPSATASSRSNRFPEISTSDALQRQLQ 98
Query: 68 QLFRLHDSGLDQSLIDALPMFYYKDIVGL----------KEPFDCAVCLCEFSEHDNLRL 117
QLF L+DSGLDQ+ IDALP+F+YK+IVG +EPFDCAVCLCEFSE D LRL
Sbjct: 99 QLFHLNDSGLDQAFIDALPVFHYKEIVGSAGGGGGNGAAQEPFDCAVCLCEFSEKDKLRL 158
Query: 118 LPSCSHAFHITCIDTWLLSNSTCPLCRGTLSSSDNSLENPVSSFDVSREISTGFTTDEEN 177
LP CSHAFH+ CIDTWL SNSTCPLCRGTL S S+ENP+ FD RE G T +
Sbjct: 159 LPMCSHAFHLNCIDTWLQSNSTCPLCRGTLFSPGFSMENPMFDFDDIREDEEGVTEN--- 215
Query: 178 GFSGRHKPENVHESAAPKRVFSVRLGKFKSI----NGDNRERVQGEMSSCNKLDARRCYS 233
G K + E K V VRLGKFK + NG ++ V G +S + LDARRC+S
Sbjct: 216 ---GSQKTMEIQEIVVEKGVLPVRLGKFKRLDNVGNGQGQDVVAGGETSSSNLDARRCFS 272
Query: 234 MGAFQYVLVDSDLQVALSN---------HIACDGTGSSNSLVDGELEGKKISERTRGESY 284
MG++QY+L +S+L+V +N + TG+S+S + KKI+ +GES+
Sbjct: 273 MGSYQYILGNSELKVPFANDRLPRLKPQDKESEQTGNSSS-----EDNKKINTVAKGESF 327
Query: 285 SVSKIWLWSKKS--------RLPSSSSNA 305
SVSKIWLW KK RLPSSS N
Sbjct: 328 SVSKIWLWPKKDKFSSDAQRRLPSSSLNV 356
>sp|Q8GW38|ATL47_ARATH RING-H2 finger protein ATL47 OS=Arabidopsis thaliana GN=ATL47 PE=2
SV=1
Length = 369
Score = 280 bits (716), Expect = 9e-75, Method: Compositional matrix adjust.
Identities = 167/315 (53%), Positives = 208/315 (66%), Gaps = 31/315 (9%)
Query: 10 ATSRISPVLLLILVIVAVVFFIFGLVHLLIRY-LKKRPSPL---PNHQSNRFPE----TT 61
+RISP++L I+V+++V+FFI ++HLL+RY LKK+ S L PN +SN+ PE T
Sbjct: 45 GNNRISPIILFIIVLLSVIFFICSILHLLVRYYLKKKRSNLSSSPN-ESNQNPEFSDSDT 103
Query: 62 LQTQLQQLFRLHDSGLDQSLIDALPMFYYKDIVGLKEPFDCAVCLCEFSEHDNLRLLPSC 121
Q QLQQLF LHDSGLDQ+LIDALP+F YK+I G KEPFDCAVCLCEFSE D LRLLP+C
Sbjct: 104 YQRQLQQLFHLHDSGLDQALIDALPVFLYKEIKGTKEPFDCAVCLCEFSEDDKLRLLPNC 163
Query: 122 SHAFHITCIDTWLLSNSTCPLCRGTLSSSDNSLENPVSSFDVSREISTGFTTDEENGFSG 181
SHAFHI CIDTWLLSNSTCPLCRGTL S + E P D + G S
Sbjct: 164 SHAFHIDCIDTWLLSNSTCPLCRGTLFSLGHQFEYP----DFNFGFFAGDDGGGGVRVSP 219
Query: 182 RHKPENVHESAAPKRVFSVRLGKFKSIN---GDNRERVQGEMSSCNKLDARRCYSMGAFQ 238
KP E+ KRVFSVRLGKF+S N G +S + LD RRC+SMG++Q
Sbjct: 220 VQKPA---ENEIGKRVFSVRLGKFRSSNIVNNGEVVVGGGGETSSSSLDNRRCFSMGSYQ 276
Query: 239 YVLVDSDLQVALSNHIACDGTGSSNSLVDGELEGKKISERTRGESYSVSKIWLWS-KKSR 297
Y++ +SDL VAL + G N + ++EGKKI+ R++GES+SVSKIW WS K+S+
Sbjct: 277 YIVAESDLVVAL----CPNNEGLKN---NKDVEGKKINMRSKGESFSVSKIWQWSNKRSK 329
Query: 298 LPSSSSNAHMAELGL 312
P N H +E L
Sbjct: 330 FP----NNHPSETNL 340
>sp|Q9ZV53|ATL49_ARATH Putative RING-H2 finger protein ATL49 OS=Arabidopsis thaliana
GN=ATL49 PE=3 SV=1
Length = 423
Score = 195 bits (496), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 136/336 (40%), Positives = 198/336 (58%), Gaps = 49/336 (14%)
Query: 8 SSATSRISPVLLLILVIVAVVFFIFGLVHLLIRYLKKRPSPLPNHQSNRFPETT-LQTQL 66
S+ S+I+P +LLI++I++++FFI GL+H+L+++L +P + + F T LQ QL
Sbjct: 33 SNLNSKITPNILLIIIILSIIFFISGLLHILVKFLL---TPSRESREDYFDNVTALQGQL 89
Query: 67 QQLFRLHDSGLDQSLIDALPMFYYKDIVGLK-EPFDCAVCLCEFSEHDNLRLLPSCSHAF 125
QQLF LHDSG+DQSLID LP+F+YK IVGLK PFDC VCLCEF D LRLLP CSHAF
Sbjct: 90 QQLFNLHDSGVDQSLIDTLPVFHYKSIVGLKISPFDCPVCLCEFETEDKLRLLPKCSHAF 149
Query: 126 HITCIDTWLLSNSTCPLCRGTLSSSDNSLENPVSSF-------DVSREISTGFTTDEENG 178
H+ CIDTWLLS+STCPLCR L S +S N SS+ SR++ ++ + G
Sbjct: 150 HVECIDTWLLSHSTCPLCRSNLLSGFSSHHNLSSSYLLVLESEQSSRDMVPVLESNSQLG 209
Query: 179 F------------SGRH--KPENVHESAAPKRV-FSVRLGKFKSIN--GDNRERVQGEMS 221
+ SGR P+ + K V V+LGKF++I+ G+ ++ + +S
Sbjct: 210 YDVNNDSESTRIRSGRKSCDPDGDMDGLDEKVVPLEVKLGKFRNIDHVGEGSDQKKNSIS 269
Query: 222 SCNK-LDARRCYSMGAFQYVLVDSDLQVALSNHIACDGTGSSNSL-----------VDGE 269
+K +D RRC SMG+++Y++ D + L H++ + + D
Sbjct: 270 GNSKNVDGRRCLSMGSYEYIM---DQEATLKVHVSTKKLSGKDRVPSHRTVMSECGFDPT 326
Query: 270 LEG--KKISERTRGESYSVSKIWLWSKKSRLPSSSS 303
++G K + ER ES+S+SKIWL KK + +S+
Sbjct: 327 VKGIEKSVVER---ESFSLSKIWLRGKKEKQKGTSA 359
>sp|Q7X843|ATL48_ARATH RING-H2 finger protein ATL48 OS=Arabidopsis thaliana GN=ATL48 PE=2
SV=2
Length = 349
Score = 195 bits (495), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 115/258 (44%), Positives = 158/258 (61%), Gaps = 32/258 (12%)
Query: 3 NESTPSSATSRISPVLLLILVIVAVVFFIFGLVHLLIRYLKKRPS--PLPNHQSNRFPET 60
N+ PSS S I VL L++ +A++ G+++L+ ++L+K + P+P+ N +
Sbjct: 107 NQKDPSS--SSIVSVLCLVISGLALIIVFLGVLYLIFKFLRKSSTLFPIPHFNYNPDLFS 164
Query: 61 TLQTQLQQLFRLHDSGLDQSLIDALPMFYYKDI-VGLKEPFDCAVCLCEFSEHDNLRLLP 119
QLQ LF LHDSGLDQ+ IDALP+F Y ++ + L++PFDCAVCL EFS+ D LRLLP
Sbjct: 165 FSSPQLQHLFFLHDSGLDQTAIDALPVFLYGNVTISLEQPFDCAVCLNEFSDTDKLRLLP 224
Query: 120 SCSHAFHITCIDTWLLSNSTCPLCRGTLSSSD---NSLENPVSSFDVSREISTGFTTDEE 176
CSHAFH+ CIDTWLLSNSTCPLCR +LS+S+ N E V+ +++ G
Sbjct: 225 VCSHAFHLHCIDTWLLSNSTCPLCRRSLSTSNVCYNHSETLVAPLSGHQQVDDG------ 278
Query: 177 NGFSGRHKPENVHESAAPKRVFSVRLGKFKSINGDNRER--VQGEMSSCNKLDARRCYSM 234
+++ KRVFSVRLG+FKS N +R V+ E+ RRCYSM
Sbjct: 279 -------------KASLAKRVFSVRLGRFKSTNESQSQRHDVKDEI---GVRMPRRCYSM 322
Query: 235 GAFQYVLVDSDLQVALSN 252
G QY++ D D VALS+
Sbjct: 323 GTQQYLVCDQDFVVALSS 340
>sp|Q940Q4|ATL13_ARATH RING-H2 finger protein ATL13 OS=Arabidopsis thaliana GN=ATL13 PE=2
SV=2
Length = 472
Score = 180 bits (457), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 118/304 (38%), Positives = 154/304 (50%), Gaps = 72/304 (23%)
Query: 60 TTLQTQLQQLFRLHDSGLDQSLIDALPMFYYKDIVGLKE-PFDCAVCLCEFSEHDNLRLL 118
T LQ QLQQLF LHDSG+DQS ID LP+F+YK I+GLK PFDCAVCLCEF D LRLL
Sbjct: 91 TALQGQLQQLFHLHDSGVDQSFIDTLPVFHYKSIIGLKNYPFDCAVCLCEFETEDKLRLL 150
Query: 119 PSCSHAFHITCIDTWLLSNSTCPLCRGTLSSSDNSLENPVSSF---------DVSREIST 169
P CSHAFH+ CIDTWLLS+STCPLCR +L S +S ++P SSF SREI
Sbjct: 151 PKCSHAFHMDCIDTWLLSHSTCPLCRSSLLSDLSSHQDPRSSFLLVLESASDHSSREIGG 210
Query: 170 G----------------------------FTTDEENGFSGRHKPENVHESAAPKRVFSVR 201
+T ++G ++ + S FSV+
Sbjct: 211 DRDSAACVAANDDIDVSSAHLGLVGNNDLGSTRIDSGHGDQYLDGELGGSVGKVVPFSVK 270
Query: 202 LGKFKSINGDNRERVQGEMSSCNKLDARRCYSMGAFQYVLVDSDLQVALSNHIACDGTGS 261
LGKF++I+ + + + LD RRC+SMG+++Y++ D + L H++ S
Sbjct: 271 LGKFRNIDIGEGTSSNNNIGNSSSLDERRCFSMGSYEYIM---DEETTLKVHVSTKKQSS 327
Query: 262 SNSLVDG----------------------------ELEGKKISERTRGESYSVSKIWLWS 293
N + G E K + ER ES+SVSKIWL
Sbjct: 328 KNRGLPGHRTAMSECGFDPTGRLKFSGSGSMRIVEEAAEKNVVER---ESFSVSKIWLRG 384
Query: 294 KKSR 297
KK +
Sbjct: 385 KKEK 388
>sp|Q9FHG8|ATL50_ARATH Putative RING-H2 finger protein ATL50 OS=Arabidopsis thaliana
GN=ATL50 PE=3 SV=1
Length = 210
Score = 150 bits (379), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 70/135 (51%), Positives = 96/135 (71%), Gaps = 4/135 (2%)
Query: 14 ISPVLLLILVIVAVVFFIFGLVHLLIRYLKKRPSPLPNHQSNRFPE--TTLQTQLQQLFR 71
ISP++LL + +++++FF+ L+HLL+++L RP + + E T LQ + Q F
Sbjct: 32 ISPIVLLYITLLSIIFFVAALIHLLVKFLH-RPQTRLDDAYDGITESSTALQGRYQTRFN 90
Query: 72 LHDSGLDQSLIDALPMFYYKDIVGLKEPF-DCAVCLCEFSEHDNLRLLPSCSHAFHITCI 130
LHD+ +DQS IDALP+ +YK ++GL+ DCAVCL EF+ D LRLLP CSHAFH+ CI
Sbjct: 91 LHDAEIDQSFIDALPLLHYKTMIGLRHDLSDCAVCLREFTAEDELRLLPKCSHAFHVECI 150
Query: 131 DTWLLSNSTCPLCRG 145
DTWLL+NSTCPLCR
Sbjct: 151 DTWLLTNSTCPLCRD 165
>sp|Q84W40|ATL11_ARATH RING-H2 finger protein ATL11 OS=Arabidopsis thaliana GN=ATL11 PE=2
SV=2
Length = 404
Score = 103 bits (258), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 56/147 (38%), Positives = 77/147 (52%), Gaps = 17/147 (11%)
Query: 8 SSATSRISPVLLLILVIVAVVFFIFGLVHLLIRYLKKRPSPL----PNHQSNRFPETTLQ 63
S +SR P + ++++++ VFF G + IR +R + PN N L
Sbjct: 53 SGDSSRFDPTMAILMIVLVSVFFFLGFFSVYIRRCLERVMGMDYGNPNDAGN-----WLA 107
Query: 64 TQLQQLFRLHDSGLDQSLIDALPMFYYKDIVGL---KEPFDCAVCLCEFSEHDNLRLLPS 120
T QQ GLD S+I+ P F Y + L KE +C+VCL EF + + LRL+P
Sbjct: 108 TNRQQA-----RGLDASIIETFPTFQYSTVKTLRIGKEALECSVCLNEFEDDETLRLIPK 162
Query: 121 CSHAFHITCIDTWLLSNSTCPLCRGTL 147
C H FH CID WL S++TCPLCR L
Sbjct: 163 CCHVFHPGCIDAWLRSHTTCPLCRADL 189
>sp|Q9SRQ8|ATL51_ARATH RING-H2 finger protein ATL51 OS=Arabidopsis thaliana GN=ATL51 PE=2
SV=2
Length = 356
Score = 101 bits (252), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 82/280 (29%), Positives = 127/280 (45%), Gaps = 48/280 (17%)
Query: 16 PVLLLILVIVAVVFFIFGLVHLLIRYLKKR---PSPLPNHQSNRFP-ETTLQTQL----- 66
P+L+ ++ I+A F + L+ +Y +R S NR + T Q
Sbjct: 58 PLLIALIGILASAFILVSYYTLISKYCHRRRHNSSSTSAAAINRISSDYTWQGTNNNNNN 117
Query: 67 ------QQLFRLHDSGLDQSLIDALPMFYYKDIVGLKEPFDCAVCLCEFSEHDNLRLLPS 120
Q + GLD+SLI ++ ++ Y+ + G E DC+VCL EF E+++LRLLP
Sbjct: 118 GATNPNQTIGGGGGDGLDESLIKSITVYKYRKMDGFVESSDCSVCLSEFQENESLRLLPK 177
Query: 121 CSHAFHITCIDTWLLSNSTCPLCRGTLSSSDNSLENPVSSFDVSRE---ISTG------F 171
C+HAFH+ CIDTWL S+S CPLCR + +S +++ + E ISTG
Sbjct: 178 CNHAFHVPCIDTWLKSHSNCPLCRAFIVTSSAVEIVDLTNQQIVTENNSISTGDDSVVVV 237
Query: 172 TTDEENGFSGRHKPENVHESAAPKRVFSVRLGKFKSINGDNRERVQGEMSSCNKLDARRC 231
D EN R + E V+E + PK EM + RR
Sbjct: 238 NLDLEN---SRSRNETVNEGSTPK---------------------PPEMQDSRDGEERRS 273
Query: 232 YSMGAFQYVLVDSDLQVALSNHIACDGTGSSNSLVDGELE 271
S+ + V+ +D+ + + G G+S + +GE E
Sbjct: 274 ASLNSGGGVVSIADILREIEDDEESAGVGTSRWVEEGEGE 313
>sp|O64763|ATL9_ARATH E3 ubiquitin-protein ligase ATL9 OS=Arabidopsis thaliana GN=ATL9
PE=1 SV=1
Length = 378
Score = 101 bits (251), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 49/136 (36%), Positives = 76/136 (55%), Gaps = 9/136 (6%)
Query: 16 PVLLLILVIVAVVFF-IFGLVHLLIRYLKKRPSPLPNHQSNRFPETTLQTQLQQLFRLHD 74
PV+++I V+ V+FF +FG + + ++ + R + ++Q+ ++ RL
Sbjct: 50 PVVVVITVLFLVIFFMVFGSI-----FCRRSNAQFSRSSIFRSTDADAESQVVRIRRLTA 104
Query: 75 SGLDQSLIDALPMFYYKDIVGL---KEPFDCAVCLCEFSEHDNLRLLPSCSHAFHITCID 131
GLD I+ P F Y ++ + K +CAVCLCEF + + LRL+P C H FH C+D
Sbjct: 105 RGLDAEAIETFPTFLYSEVKAVRIGKGGVECAVCLCEFEDDETLRLMPPCCHVFHADCVD 164
Query: 132 TWLLSNSTCPLCRGTL 147
WL +STCPLCR L
Sbjct: 165 VWLSEHSTCPLCRADL 180
>sp|Q5EAE9|ATL43_ARATH RING-H2 finger protein ATL43 OS=Arabidopsis thaliana GN=ATL43 PE=2
SV=2
Length = 407
Score = 98.6 bits (244), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 56/171 (32%), Positives = 92/171 (53%), Gaps = 9/171 (5%)
Query: 11 TSRISPVLLLILVIVAVVFFIFGLVHLLIRYLKKRPSPLPNHQSNRFPETTLQTQLQQLF 70
TS + P + +++ ++ F + L+ L +++ K+R + + RF T
Sbjct: 51 TSSLMPGIAVVIAVLTAFFSLTFLLLLYVKHCKRRNGSVYVNHPQRFAITRYGGGYYNGG 110
Query: 71 RL----HDSGLDQSLIDALPMFYYKDIVGLKEPFDCAVCLCEFSEHDNLRLLPSCSHAFH 126
+ +SG+D+S+I++LP+F + + G K+ +CAVCL F + LRLLP C HAFH
Sbjct: 111 GVVGGRKNSGIDRSVIESLPVFRFGALSGHKDGLECAVCLARFEPTEVLRLLPKCKHAFH 170
Query: 127 ITCIDTWLLSNSTCPLCRGTLSSSDNSLENPVSSFDVSREISTGFTTDEEN 177
+ C+DTWL ++STCPLCR + D L +S+ F+ DE N
Sbjct: 171 VECVDTWLDAHSTCPLCRYRVDPEDILLIGDCNSW-----FELQFSKDESN 216
>sp|Q9SL78|ATL12_ARATH Putative RING-H2 finger protein ATL12 OS=Arabidopsis thaliana
GN=ATL12 PE=3 SV=1
Length = 390
Score = 98.6 bits (244), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 50/134 (37%), Positives = 74/134 (55%), Gaps = 2/134 (1%)
Query: 21 ILVIVAVVFFIFGLVHLLIRYLKKRPSPLPNHQSNRFPETTLQTQLQQLFRLHD--SGLD 78
+ +I V +F L +L+ Y K + L + + Q LF SGLD
Sbjct: 41 LAIITGVFSIVFTLTFVLLVYAKCFHNDLRSETDSDGERIRHDRLWQGLFNRSSRFSGLD 100
Query: 79 QSLIDALPMFYYKDIVGLKEPFDCAVCLCEFSEHDNLRLLPSCSHAFHITCIDTWLLSNS 138
+ I++LP F + + GLK+ +C+VCL +F + + LRLLP C HAFHI CID WL ++
Sbjct: 101 KKAIESLPFFRFSALKGLKQGLECSVCLSKFEDVEILRLLPKCRHAFHIGCIDQWLEQHA 160
Query: 139 TCPLCRGTLSSSDN 152
TCPLCR ++ D+
Sbjct: 161 TCPLCRNRVNIEDD 174
>sp|Q8LFY8|ATL54_ARATH RING-H2 finger protein ATL54 OS=Arabidopsis thaliana GN=ATL54 PE=2
SV=2
Length = 413
Score = 98.2 bits (243), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 49/139 (35%), Positives = 78/139 (56%), Gaps = 7/139 (5%)
Query: 17 VLLLILVIVAVVFFIFGLVHLLIRYLKKRPSPLPNHQSNRFPETTLQTQLQQ-------L 69
++ + ++A++ F LV R + N +T ++ + Q +
Sbjct: 85 IITITGAVLAILLTGFFLVAKFFSDSVNRVNQGTYQSDNEDNDTVMEEEFQDREQVDHPI 144
Query: 70 FRLHDSGLDQSLIDALPMFYYKDIVGLKEPFDCAVCLCEFSEHDNLRLLPSCSHAFHITC 129
+ + +GL QS+I+++ + YK GL E DC VCL EF E ++LRLLP C+HAFHI+C
Sbjct: 145 WLIRTTGLQQSIINSITICNYKRGDGLIERTDCPVCLNEFEEDESLRLLPKCNHAFHISC 204
Query: 130 IDTWLLSNSTCPLCRGTLS 148
IDTWL S++ CPLCR ++
Sbjct: 205 IDTWLSSHTNCPLCRAGIA 223
>sp|Q8W571|ATL32_ARATH RING-H2 finger protein ATL32 OS=Arabidopsis thaliana GN=ATL32 PE=2
SV=3
Length = 323
Score = 97.4 bits (241), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 47/143 (32%), Positives = 81/143 (56%), Gaps = 16/143 (11%)
Query: 15 SPVLLLILVIVAVVFFIFGLVHLLIRY-LKKRPSPLPNHQSNRFPETTLQTQLQQLFRLH 73
+P + ++ +FF+ GL+ + IR+ + P + NR + + +
Sbjct: 43 TPSKTTVFAVLVTLFFLTGLLSVYIRHCARSNPDSSTRYFRNRANDGSSRR--------- 93
Query: 74 DSGLDQSLIDALPMFYYKDI----VGLKEPFDCAVCLCEFSEHDNLRLLPSCSHAFHITC 129
GLD +++++ P+F Y + +G K+ +CA+CL E +H+ +RLLP C+H FHI C
Sbjct: 94 -GGLDNAVVESFPVFAYSSVKESKIGSKD-LECAICLNELEDHETVRLLPICNHLFHIDC 151
Query: 130 IDTWLLSNSTCPLCRGTLSSSDN 152
IDTWL S++TCP+CR L++ N
Sbjct: 152 IDTWLYSHATCPVCRSNLTAKSN 174
>sp|Q9LF64|ATL52_ARATH RING-H2 finger protein ATL52 OS=Arabidopsis thaliana GN=ATL52 PE=2
SV=1
Length = 362
Score = 95.9 bits (237), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 74/242 (30%), Positives = 112/242 (46%), Gaps = 33/242 (13%)
Query: 51 NHQSNRFPETTLQTQLQQLFRLHDSGLDQSLIDALPMFYYKDIVGLKEPFDCAVCLCEFS 110
NH F +T Q + GL++S+I ++ ++ YK G + DC+VCL EF
Sbjct: 97 NHNGEGFFSST------QRISTNGDGLNESMIKSITVYKYKSGDGFVDGSDCSVCLSEFE 150
Query: 111 EHDNLRLLPSCSHAFHITCIDTWLLSNSTCPLCRGTLSSSDNSLENPVSSFDVSREISTG 170
E+++LRLLP C+HAFH+ CIDTWL S+S CPLCR ++ + NP +S V + +S
Sbjct: 151 ENESLRLLPKCNHAFHLPCIDTWLKSHSNCPLCRAFVT----GVNNPTAS--VGQNVSVV 204
Query: 171 FTTDEENGFSGRHKPENVHESAAPKRVFSVRLGKFKSI-----------NGDNRERVQ-- 217
N + H+ +V E + + G F S+ N D R +Q
Sbjct: 205 VA----NQSNSAHQTGSVSEINLNLAGYESQTGDFDSVVVIEDLEIGSRNSDARSELQLP 260
Query: 218 ---GEMSSCNKLDARRCYSMGAFQYVLVDSDLQVALSNHIACDGTGSSNSLVDGE-LEGK 273
E + L RR S+ + V + L+ G G+S +GE +GK
Sbjct: 261 EERRETKDEDSLPIRRSVSLNSGVVVSIADVLREIEDEEGESGGVGTSQRREEGEDGDGK 320
Query: 274 KI 275
I
Sbjct: 321 TI 322
>sp|Q5XF85|ATL42_ARATH E3 ubiquitin-protein ligase ATL42 OS=Arabidopsis thaliana GN=ATL42
PE=1 SV=2
Length = 432
Score = 95.5 bits (236), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 40/79 (50%), Positives = 56/79 (70%)
Query: 75 SGLDQSLIDALPMFYYKDIVGLKEPFDCAVCLCEFSEHDNLRLLPSCSHAFHITCIDTWL 134
SGLD++ I++LP+F + + G K+ DC+VCL +F + LRLLP C HAFHI CID WL
Sbjct: 96 SGLDKTAIESLPLFRFSALKGSKQGLDCSVCLSKFESVEILRLLPKCRHAFHIGCIDQWL 155
Query: 135 LSNSTCPLCRGTLSSSDNS 153
++TCPLCR +S ++S
Sbjct: 156 EQHATCPLCRDRVSMEEDS 174
>sp|Q9FIR0|ATL30_ARATH RING-H2 finger protein ATL30 OS=Arabidopsis thaliana GN=ATL30 PE=2
SV=1
Length = 289
Score = 95.5 bits (236), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 59/161 (36%), Positives = 84/161 (52%), Gaps = 8/161 (4%)
Query: 2 ENESTPSSATSRISPVLLLIL-VIVAVVFFI-FGLVHLLIRYLKKRPSPLPNHQSNRFPE 59
+N + P P L++IL VI+ VVFFI F ++ + +H N PE
Sbjct: 9 QNTTVPYPPQHYSKPPLVIILTVILLVVFFIGFFAIYFCKCFYHTLTEAWNHHYHNGLPE 68
Query: 60 TTLQTQLQQLFRLHDSGLDQSLIDALPMFYYKDIVGLKEP---FDCAVCLCEFSE-HDNL 115
+Q Q + + + GL+ +I + P+F + + L+E +CA+CL EF E H L
Sbjct: 69 NQIQAQQEPVQPPVNPGLEPHIIQSYPLFPFSSVKDLREDKYGLECAICLLEFEEEHILL 128
Query: 116 RLLPSCSHAFHITCIDTWLLSNSTCPLCRGTLSSSDNSLEN 156
RLL +C H FH CID WL SN TCP+CR L N+ EN
Sbjct: 129 RLLTTCYHVFHQECIDQWLESNKTCPVCRRNLDP--NAPEN 167
>sp|Q9SK92|ATL15_ARATH E3 ubiquitin-protein ligase ATL15 OS=Arabidopsis thaliana GN=ATL15
PE=1 SV=1
Length = 381
Score = 95.1 bits (235), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 55/157 (35%), Positives = 76/157 (48%), Gaps = 19/157 (12%)
Query: 14 ISPVLLLILVIVAVVFFIFGLVHLLIRYLKKRPSPLPNHQSNRFPETTLQTQLQQLFRLH 73
SP +I++++ VFF G + + +R + + S P L + +
Sbjct: 35 FSPTTAIIMIVLVSVFFALGCISVYMRRCLQHALGM---DSGGGPGNWLNVR-----QTT 86
Query: 74 DSGLDQSLIDALPMFYYKDIVGL---KEPFDCAVCLCEFSEHDNLRLLPSCSHAFHITCI 130
+ GLD S+I+ P F Y + L KE +C VCL EF + + LRL+P C H FH CI
Sbjct: 87 EPGLDASVIETFPTFPYSTVKTLRIGKEALECPVCLNEFEDDETLRLIPQCCHVFHPGCI 146
Query: 131 DTWLLSNSTCPLCRGTLSSSDNSLENPVSSFDVSREI 167
D WL S +TCPLCR L PV VS EI
Sbjct: 147 DAWLRSQTTCPLCRANLV--------PVPGESVSSEI 175
>sp|Q8RXX9|ATL6_ARATH E3 ubiquitin-protein ligase ATL6 OS=Arabidopsis thaliana GN=ATL6
PE=1 SV=2
Length = 398
Score = 94.0 bits (232), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 47/140 (33%), Positives = 70/140 (50%), Gaps = 13/140 (9%)
Query: 13 RISPVLLLILVIVAVVFFIFGLVHLLIRYLKKRPSPLPNHQSNRFPETTLQTQLQQLFRL 72
R+SP + +I+VI+ F G + R+ P + T+ +
Sbjct: 44 RLSPAMAVIVVILIAALFFMGFFSIYFRHCSGVPDAGVSPAGGARSRATVNAAAR----- 98
Query: 73 HDSGLDQSLIDALPMFYYKDI----VGLKEPFDCAVCLCEFSEHDNLRLLPSCSHAFHIT 128
GLD S+++ P F Y D+ +G E +CA+CL EF + + LRLLP C H FH
Sbjct: 99 ---GLDVSVVETFPTFLYSDVKTQKLGKGE-LECAICLNEFEDDETLRLLPKCDHVFHPH 154
Query: 129 CIDTWLLSNSTCPLCRGTLS 148
CID WL ++ TCP+CR L+
Sbjct: 155 CIDAWLEAHVTCPVCRANLA 174
>sp|O64762|ATL38_ARATH RING-H2 finger protein ATL38 OS=Arabidopsis thaliana GN=ATL38 PE=2
SV=1
Length = 302
Score = 93.6 bits (231), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 46/139 (33%), Positives = 77/139 (55%), Gaps = 10/139 (7%)
Query: 13 RISPVLLLILVIVAVVFFIFGLVHLLIRYLKKRPSPLPNHQSNRFPETTLQTQLQQLFRL 72
+ S + LL++ I+ FI GL + R+ ++ N F ++ ++++
Sbjct: 9 KASDLTLLVITIILFAIFIVGLASVCFRWTSRQF--YSQESINPFTDSDVESRTSIT--- 63
Query: 73 HDSGLDQSLIDALPMFYYKDI----VGLKEPFDCAVCLCEFSEHDNLRLLPSCSHAFHIT 128
GLD+++I++ P F Y ++ +G+ +CAVC+CEF +H+ LRL+P C H FH
Sbjct: 64 AVRGLDEAIINSFPTFLYSEVKERRIGIG-GVECAVCICEFEDHETLRLMPECCHVFHAD 122
Query: 129 CIDTWLLSNSTCPLCRGTL 147
C+ WL +STCPLCR L
Sbjct: 123 CVSVWLSDHSTCPLCRVDL 141
>sp|Q9C7I1|ATL34_ARATH RING-H2 finger protein ATL34 OS=Arabidopsis thaliana GN=ATL34 PE=2
SV=1
Length = 327
Score = 92.4 bits (228), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 52/144 (36%), Positives = 78/144 (54%), Gaps = 9/144 (6%)
Query: 23 VIVAVVFF--IFGLVHLLIRYLKKRPSPLPNHQSNRFPETTLQTQLQQLFRLHDSGLDQS 80
VI+A++ F +F ++ + Y SP H ++ E ++ R GL +
Sbjct: 48 VIIAMLMFTLLFSMLACCVCYKYTNTSP---HGTSSDTEEGGHGEVA-FTRRTSRGLGKD 103
Query: 81 LIDALPMFYYKDIVGLK---EPFDCAVCLCEFSEHDNLRLLPSCSHAFHITCIDTWLLSN 137
+I++ P F Y + GLK +CA+CL EF + + LRL+P CSHAFH +CID WL S
Sbjct: 104 VINSFPSFLYSQVKGLKIGKGGVECAICLNEFEDEETLRLMPPCSHAFHASCIDVWLSSR 163
Query: 138 STCPLCRGTLSSSDNSLENPVSSF 161
STCP+CR +L S +N + F
Sbjct: 164 STCPVCRASLPPKPGSDQNSLYPF 187
>sp|Q8H7N9|ATL31_ORYSJ E3 ubiquitin-protein ligase Os03g0188200 OS=Oryza sativa subsp.
japonica GN=Os03g0188200 PE=2 SV=1
Length = 353
Score = 90.5 bits (223), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 51/158 (32%), Positives = 77/158 (48%), Gaps = 8/158 (5%)
Query: 8 SSATSRISPVLLLILVIVAVVFFIFGLVHLLI-RYLKKRPSPLPNHQSNRFPETTLQTQL 66
S+ +P +++LV + F + + +LI R + R P ++ R +
Sbjct: 37 SATAGGFTPTTVVVLVALITAFVLLTVFSVLINRCAQAR---APPRRAFRSTASHQPVGG 93
Query: 67 QQLFRLHDSGLDQSLIDALPMFYYKDI----VGLKEPFDCAVCLCEFSEHDNLRLLPSCS 122
GLD+ +++A P Y D+ P +CAVCL EF++ D LR+LP+C
Sbjct: 94 AAAASRASRGLDKEVVEAFPTAVYGDVKARMAAKSGPLECAVCLAEFADSDELRVLPACC 153
Query: 123 HAFHITCIDTWLLSNSTCPLCRGTLSSSDNSLENPVSS 160
H FH CID WL + TCPLCR L++ SL SS
Sbjct: 154 HVFHPDCIDPWLAAAVTCPLCRANLTAPPVSLAAAESS 191
>sp|Q7XLY8|ATL41_ORYSJ E3 ubiquitin-protein ligase Os04g0590900 OS=Oryza sativa subsp.
japonica GN=Os04g0590900 PE=2 SV=2
Length = 383
Score = 90.5 bits (223), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 42/83 (50%), Positives = 56/83 (67%)
Query: 75 SGLDQSLIDALPMFYYKDIVGLKEPFDCAVCLCEFSEHDNLRLLPSCSHAFHITCIDTWL 134
SGLD++LI+ + + Y+ G DC+VCL EFS+ ++LRLLP CSHAFH CIDTWL
Sbjct: 130 SGLDETLINKITVCKYRRGDGFVHTTDCSVCLGEFSDGESLRLLPRCSHAFHQQCIDTWL 189
Query: 135 LSNSTCPLCRGTLSSSDNSLENP 157
S+S CPLCR ++ L +P
Sbjct: 190 KSHSNCPLCRANITFVTVGLASP 212
>sp|Q9M0R6|ATL35_ARATH Putative RING-H2 finger protein ATL35 OS=Arabidopsis thaliana
GN=ATL35 PE=3 SV=1
Length = 302
Score = 90.5 bits (223), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 50/156 (32%), Positives = 77/156 (49%), Gaps = 19/156 (12%)
Query: 16 PVLLLILVIVAVVFFIFGLVHLLIRYLKKRPSPLPNHQSNRFPETTLQTQLQQLFRLH-D 74
P +I +IV +F +V + H++ F ++ Q++F
Sbjct: 47 PTETVIAIIVLAIFISLSMVACFL------------HKT--FYRAEVEAASQEVFHSRAR 92
Query: 75 SGLDQSLIDALPMFYYKDIVGLK---EPFDCAVCLCEFSEHDNLRLLPSCSHAFHITCID 131
GL++ L+++ P+F Y ++ GLK +CA+CL EF + + LR +P CSH FH CID
Sbjct: 93 RGLEKELVESFPIFLYSEVKGLKIGKGGVECAICLSEFVDKETLRWMPPCSHTFHANCID 152
Query: 132 TWLLSNSTCPLCRGTLS-SSDNSLENPVSSFDVSRE 166
WL S STCP CR LS S P++ + E
Sbjct: 153 VWLSSQSTCPACRANLSLKPGESYPYPITDLETGNE 188
>sp|Q9M0R4|ATL37_ARATH Putative RING-H2 finger protein ATL37 OS=Arabidopsis thaliana
GN=ATL37 PE=3 SV=1
Length = 357
Score = 89.7 bits (221), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 42/92 (45%), Positives = 57/92 (61%), Gaps = 6/92 (6%)
Query: 76 GLDQSLIDALPMFYYKDIVGLK---EPFDCAVCLCEFSEHDNLRLLPSCSHAFHITCIDT 132
G+D+ +I++ P F Y ++ K +CA+CLCEF + + LR +P CSH FH CID
Sbjct: 91 GIDKDVIESFPAFLYSEVKAFKIGNGGVECAICLCEFEDEEPLRWMPPCSHTFHANCIDE 150
Query: 133 WLLSNSTCPLCRGTLS-SSDNSLENPVSSFDV 163
WL S STCP+CR LS S +S +P S DV
Sbjct: 151 WLSSRSTCPVCRANLSLKSGDSFPHP--SMDV 180
>sp|Q8L9T5|ATL2_ARATH RING-H2 finger protein ATL2 OS=Arabidopsis thaliana GN=ATL2 PE=2
SV=2
Length = 304
Score = 89.4 bits (220), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 38/74 (51%), Positives = 51/74 (68%), Gaps = 1/74 (1%)
Query: 76 GLDQSLIDALPMFYYKDIVGLKEPFDCAVCLCEFSEHDNLRLLPSCSHAFHITCIDTWLL 135
GLD ++I +LP+F + D K+P +CAVCL EF E + R+LP+C H FH+ CID W
Sbjct: 94 GLDPNVIKSLPVFTFSDETH-KDPIECAVCLSEFEESETGRVLPNCQHTFHVDCIDMWFH 152
Query: 136 SNSTCPLCRGTLSS 149
S+STCPLCR + S
Sbjct: 153 SHSTCPLCRSLVES 166
>sp|Q9M0R5|ATL36_ARATH Putative RING-H2 finger protein ATL36 OS=Arabidopsis thaliana
GN=ATL36 PE=3 SV=1
Length = 345
Score = 88.6 bits (218), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 37/76 (48%), Positives = 50/76 (65%), Gaps = 3/76 (3%)
Query: 76 GLDQSLIDALPMFYYKDIVGLK---EPFDCAVCLCEFSEHDNLRLLPSCSHAFHITCIDT 132
GL++ +I++ P F Y ++ GLK +CA+CL EF + + LR +P CSH FH CID
Sbjct: 94 GLEKEVIESFPTFLYSEVKGLKIGKGGVECAICLSEFEDQETLRWMPPCSHTFHANCIDV 153
Query: 133 WLLSNSTCPLCRGTLS 148
WL S STCP+CR LS
Sbjct: 154 WLSSWSTCPVCRANLS 169
>sp|P0C035|ATL60_ARATH RING-H2 finger protein ATL60 OS=Arabidopsis thaliana GN=ATL60 PE=2
SV=1
Length = 310
Score = 88.6 bits (218), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 37/106 (34%), Positives = 63/106 (59%), Gaps = 1/106 (0%)
Query: 72 LHDSGLDQSLIDALPMFYYKDIVGLKEPFDCAVCLCEFSEHDNLRLLPSCSHAFHITCID 131
LH++GLD ++ ++ + +K K+ +CAVCL + + D R+LP C+H FH+ CID
Sbjct: 91 LHNAGLDSKILQSIHVVVFK-CTDFKDGLECAVCLSDLVDGDKARVLPRCNHGFHVDCID 149
Query: 132 TWLLSNSTCPLCRGTLSSSDNSLENPVSSFDVSREISTGFTTDEEN 177
W S+STCPLCR T+ S +++ ++ +G +T++ N
Sbjct: 150 MWFQSHSTCPLCRNTVGSVEDTTHGGSEGLPQNQNFESGHSTNQHN 195
>sp|Q9LY41|ATL4_ARATH E3 ubiquitin-protein ligase ATL4 OS=Arabidopsis thaliana GN=ATL4
PE=1 SV=1
Length = 334
Score = 87.4 bits (215), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 55/176 (31%), Positives = 81/176 (46%), Gaps = 38/176 (21%)
Query: 80 SLIDALPMFYYKDIVGLKEPF---DCAVCLCEFSEHDNLRLLPSCSHAFHITCIDTWLLS 136
S++D+LP+F + + DCAVCL +F D LRLLP C HAFH CID WL+S
Sbjct: 92 SVLDSLPIFKFSSVTRRSSSMNSGDCAVCLSKFEPEDQLRLLPLCCHAFHADCIDIWLVS 151
Query: 137 NSTCPLCRGTLSSSDNSLENPVSSFDVSREISTGFTTDEENGFSGRHKPENVHESAAPKR 196
N TCPLCR L +S++ L ++ NG +
Sbjct: 152 NQTCPLCRSPLFASESDLMKSLA------------VVGSNNG--------------GGEN 185
Query: 197 VFSVRLGKFKSINGDNRERVQGEMSSCNKLDARRCYSMGAFQYVLVDSDLQVALSN 252
F + +G R Q + ++ R YS+G+F Y++ D D +++ SN
Sbjct: 186 SFRLEIGSIS-------RRRQTPIP--ESVEQHRTYSIGSFDYIVDDVDSEISESN 232
>sp|Q9LX93|ATL55_ARATH E3 ubiquitin-protein ligase RING1 OS=Arabidopsis thaliana GN=ATL55
PE=1 SV=1
Length = 301
Score = 87.0 bits (214), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 37/84 (44%), Positives = 57/84 (67%)
Query: 64 TQLQQLFRLHDSGLDQSLIDALPMFYYKDIVGLKEPFDCAVCLCEFSEHDNLRLLPSCSH 123
+ ++++ GL +S I+++ + +K G+ + +C+VCL EF E ++LRLLP CSH
Sbjct: 97 SDFHHVWQIPTVGLHRSAINSITVVGFKKGEGIIDGTECSVCLNEFEEDESLRLLPKCSH 156
Query: 124 AFHITCIDTWLLSNSTCPLCRGTL 147
AFH+ CIDTWLLS+ CPLCR +
Sbjct: 157 AFHLNCIDTWLLSHKNCPLCRAPV 180
>sp|O22255|ATL64_ARATH RING-H2 finger protein ATL64 OS=Arabidopsis thaliana GN=ATL64 PE=2
SV=1
Length = 227
Score = 87.0 bits (214), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 40/86 (46%), Positives = 53/86 (61%), Gaps = 2/86 (2%)
Query: 73 HDSGLDQSLIDALPMFYY--KDIVGLKEPFDCAVCLCEFSEHDNLRLLPSCSHAFHITCI 130
D LDQ+++D +P+F Y K+ +E +C+VCL EF E D RLLP C H+FH+ CI
Sbjct: 77 RDQALDQAVLDKIPIFVYSSKNPPPPEEKEECSVCLSEFEEEDEGRLLPKCGHSFHVDCI 136
Query: 131 DTWLLSNSTCPLCRGTLSSSDNSLEN 156
DTW S STCPLCR + +E
Sbjct: 137 DTWFRSRSTCPLCRAPVQPPFQVIET 162
>sp|P93823|ATL1_ARATH RING-H2 finger protein ATL1 OS=Arabidopsis thaliana GN=ATL1 PE=2
SV=1
Length = 381
Score = 85.9 bits (211), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 39/82 (47%), Positives = 55/82 (67%), Gaps = 7/82 (8%)
Query: 74 DSGLDQSLIDALPMFYYK--DIVGLKEPF-----DCAVCLCEFSEHDNLRLLPSCSHAFH 126
+ GLD+S I A+P+F +K D+V +E +C+VCL EF E + LR++P+C H FH
Sbjct: 99 NRGLDESAIRAIPVFKFKKRDVVAGEEDQSKNSQECSVCLNEFQEDEKLRIIPNCCHVFH 158
Query: 127 ITCIDTWLLSNSTCPLCRGTLS 148
I CID WL N+ CPLCR ++S
Sbjct: 159 IDCIDIWLQGNANCPLCRTSVS 180
>sp|Q67YI6|ATL65_ARATH RING-H2 finger protein ATL65 OS=Arabidopsis thaliana GN=ATL65 PE=2
SV=2
Length = 411
Score = 84.3 bits (207), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 44/96 (45%), Positives = 52/96 (54%), Gaps = 11/96 (11%)
Query: 76 GLDQSLIDALPMFYYKDIVGLKEPF----------DCAVCLCEFSEHDNLRLLPSCSHAF 125
GLD S+I LP+F Y +P DCAVCL EF E D +R LP C HAF
Sbjct: 120 GLDDSVIKTLPLFLYSAAACTGKPAVGKTSAANCRDCAVCLLEFEEGDYVRTLPLCFHAF 179
Query: 126 HITCIDTWLLSNSTCPLCRGTLSSSDNSLENPVSSF 161
H+ CID WL S+ CPLCR + S L P+S F
Sbjct: 180 HLECIDEWLRSHPNCPLCRTAILGSAGVL-TPMSPF 214
>sp|Q9SLC4|ATL40_ARATH RING-H2 finger protein ATL40 OS=Arabidopsis thaliana GN=ATL40 PE=2
SV=1
Length = 217
Score = 83.6 bits (205), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 42/94 (44%), Positives = 54/94 (57%), Gaps = 12/94 (12%)
Query: 76 GLDQSLIDALPMFYYKDIVGLKEPF---DCAVCLCEFSEHDNLRLLPSCSHAFHITCIDT 132
GLD +I +LP F +VG+K +CAVCL E DN R+LP+C H FH++C+DT
Sbjct: 75 GLDSLVIASLPTF----VVGIKNDVAGTECAVCLSLLEEKDNARMLPNCKHVFHVSCVDT 130
Query: 133 WLLSNSTCPLCRGTLSSSDNSL-----ENPVSSF 161
WL + STCP+CR S L E PV F
Sbjct: 131 WLTTQSTCPVCRTEAEPSHPRLEPEPREGPVGDF 164
>sp|Q9LSW9|ATL16_ARATH RING-H2 finger protein ATL16 OS=Arabidopsis thaliana GN=ATL16 PE=2
SV=1
Length = 375
Score = 83.6 bits (205), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 38/91 (41%), Positives = 53/91 (58%), Gaps = 14/91 (15%)
Query: 72 LHDSGLDQSLIDALPMFYYKD--------------IVGLKEPFDCAVCLCEFSEHDNLRL 117
L GLD+S+I A+P+F +K K +C+VCL EF + + LR+
Sbjct: 94 LRSRGLDESVIRAIPIFKFKKRYDQNDGVFTGEGEEEEEKRSQECSVCLSEFQDEEKLRI 153
Query: 118 LPSCSHAFHITCIDTWLLSNSTCPLCRGTLS 148
+P+CSH FHI CID WL +N+ CPLCR +S
Sbjct: 154 IPNCSHLFHIDCIDVWLQNNANCPLCRTRVS 184
>sp|P0C041|ATL53_ARATH Putative RING-H2 finger protein ATL53 OS=Arabidopsis thaliana
GN=ATL53 PE=3 SV=2
Length = 310
Score = 83.2 bits (204), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 53/151 (35%), Positives = 75/151 (49%), Gaps = 15/151 (9%)
Query: 9 SATSRISPVLLLILVIVAVVFFIFGLVHLLIRYLKKRPSPLPNHQSNRF--------PET 60
++ +SP+++ I I A F + L+ +Y + +S R PE
Sbjct: 53 ASNPNLSPLVIAIFGIFATAFLLAAYYTLVSKYCANDTTNEAASESGRSDIILDVNSPER 112
Query: 61 TLQTQLQQLFRLHDS--GLDQSLIDALPMFYYKDIV-GLK-EPFDCAVCLCEFSEHDNLR 116
Q F L S GLD +LI + F K G K DC++CL EF+E ++LR
Sbjct: 113 GDQ---DDPFALESSTAGLDDTLIKKIGFFKLKKHQNGFKINGTDCSICLGEFNEDESLR 169
Query: 117 LLPSCSHAFHITCIDTWLLSNSTCPLCRGTL 147
LLP C+H FH+ CID WL S+S CPLCR +
Sbjct: 170 LLPKCNHTFHVVCIDRWLKSHSNCPLCRAKI 200
>sp|Q9SLC3|ATL41_ARATH E3 ubiquitin-protein ligase ATL41 OS=Arabidopsis thaliana GN=ATL41
PE=1 SV=1
Length = 236
Score = 79.7 bits (195), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 43/129 (33%), Positives = 64/129 (49%), Gaps = 11/129 (8%)
Query: 17 VLLLILVIVAVVFFIFGLVHLLIRYLKKRPSPLPNHQSNRFPETTLQTQLQQLFRLHDSG 76
+L + + V+ +F L HL R++ +R R L + F + G
Sbjct: 32 MLAAVASLSGVILIVFAL-HLYARFVLRR---------RREAFRGLPVIFRHPFEMPKRG 81
Query: 77 LDQSLIDALPMFYYKDIVGLK-EPFDCAVCLCEFSEHDNLRLLPSCSHAFHITCIDTWLL 135
L+ ++I +LP F G+ +CAVCL E D R LP+C H FH+ C+DTWL
Sbjct: 82 LNPTVIASLPTFTVGATDGVAASATECAVCLSVLKEQDKARELPNCKHIFHVDCVDTWLT 141
Query: 136 SNSTCPLCR 144
+ STCP+CR
Sbjct: 142 TCSTCPVCR 150
>sp|Q8LF65|ATL17_ARATH RING-H2 finger protein ATL17 OS=Arabidopsis thaliana GN=ATL17 PE=2
SV=2
Length = 235
Score = 79.3 bits (194), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 40/113 (35%), Positives = 62/113 (54%), Gaps = 9/113 (7%)
Query: 35 VHLLIRYLKKRPSPLPNHQSNRFPETTLQTQLQQLFRLHDSGLDQSLIDALPMFYYKDIV 94
+HL R+ R SP F TT + GL+ S+I +LP+F + +
Sbjct: 18 LHLYYRWYLLRSSP--------FNRTTAASTFFTDPSSTPGGLNPSIIKSLPIFTFSAVT 69
Query: 95 GLKEPFDCAVCLCEFSEHDNLRLLPSCSHAFHITCIDTWLLSNSTCPLCRGTL 147
L +C+VCL EF ++++ R++P+C H FH+ CID W S+S+CPLCR +
Sbjct: 70 ALFA-MECSVCLSEFKDNESGRVMPNCKHTFHVHCIDMWFHSHSSCPLCRSQI 121
>sp|Q9SJJ7|ATL57_ARATH RING-H2 finger protein ATL57 OS=Arabidopsis thaliana GN=ATL57 PE=2
SV=1
Length = 237
Score = 79.0 bits (193), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 46/151 (30%), Positives = 70/151 (46%), Gaps = 14/151 (9%)
Query: 14 ISPVLLLILVIVAVVFFIFGLVHLLIRYLKKRPSP------LPNHQSNRFPETTLQTQL- 66
+ + L + I+ V F G + R+ S +P +S+R L T +
Sbjct: 46 LDSTMALTIFILLVALFFMGFFSVYFRHFADSSSSTVDISSMPRTRSSRMSPRRLSTSVV 105
Query: 67 ---QQLFRLHDSGLDQSLIDALPMFYYKDIVGLKEPFDCAVCLCEFSEHDNLRLLPSCSH 123
FR GLD + +LP++ Y + DC +CL +F E + ++++P C H
Sbjct: 106 VSRPYSFR---RGLDSQAVRSLPVYRYTKAAKQRNE-DCVICLSDFEEGETVKVIPHCGH 161
Query: 124 AFHITCIDTWLLSNSTCPLCRGTLSSSDNSL 154
FH+ C+DTWL S TCPLCR SD L
Sbjct: 162 VFHVDCVDTWLSSYVTCPLCRSNQLFSDKDL 192
>sp|Q8LC69|ATL8_ARATH RING-H2 finger protein ATL8 OS=Arabidopsis thaliana GN=ATL8 PE=2
SV=2
Length = 185
Score = 79.0 bits (193), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 49/151 (32%), Positives = 78/151 (51%), Gaps = 20/151 (13%)
Query: 3 NESTPSSATSRISPVLLLIL-VIVAVVFFIFGLVHL----LIRYLKKRPSPLPNHQSNRF 57
N ++P+ A+ + L+LIL V++ + I GL+ + +R + R N
Sbjct: 13 NSTSPAEASPPFNSDLVLILAVLLCALTCIIGLIAVSRCAWLRRIASR-----NRSDQTH 67
Query: 58 PETTLQTQLQQLFRLHDSGLDQSLIDALP-MFYYKDIVGLKEPFDCAVCLCEFSEHDNLR 116
P + GL + ++ +LP + Y D ++ +CA+CL EF+ D LR
Sbjct: 68 PPPVAAA---------NKGLKKKVLRSLPKLTYSPDSPPAEKLVECAICLTEFAAGDELR 118
Query: 117 LLPSCSHAFHITCIDTWLLSNSTCPLCRGTL 147
+LP C H FH++CIDTWL S+S+CP CR L
Sbjct: 119 VLPQCGHGFHVSCIDTWLGSHSSCPSCRQIL 149
>sp|Q8LGA5|ATL31_ARATH E3 ubiquitin-protein ligase ATL31 OS=Arabidopsis thaliana GN=ATL31
PE=1 SV=2
Length = 368
Score = 77.8 bits (190), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 34/77 (44%), Positives = 45/77 (58%), Gaps = 5/77 (6%)
Query: 76 GLDQSLIDALPMFYYKDI----VGLKEPFDCAVCLCEFSEHDNLRLLPSCSHAFHITCID 131
GLD I+ P F Y ++ +G K +CA+CL EF + + LRLLP C H FH CI
Sbjct: 95 GLDAETIETFPTFVYSEVKTQKIG-KGALECAICLNEFEDDETLRLLPKCDHVFHPHCIG 153
Query: 132 TWLLSNSTCPLCRGTLS 148
WL + TCP+CR L+
Sbjct: 154 AWLQGHVTCPVCRTNLA 170
>sp|Q9WTV7|RNF12_MOUSE E3 ubiquitin-protein ligase RLIM OS=Mus musculus GN=Rlim PE=1 SV=2
Length = 600
Score = 77.8 bits (190), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 40/93 (43%), Positives = 54/93 (58%), Gaps = 10/93 (10%)
Query: 66 LQQLFRLHDS------GLDQSLIDALPMFYYKDIVGLKEPFDCAVCLCEFSEHDNLRLLP 119
L Q F L++ GL + ID L M + + LK C+VC+ E++E + LR LP
Sbjct: 507 LAQFFLLNEDDEDQPRGLTKEQIDNLAMRSFGENDALK---TCSVCITEYTEGNKLRKLP 563
Query: 120 SCSHAFHITCIDTWLLSNSTCPLCRGTLSSSDN 152
CSH +H+ CID WL NSTCP+CR + SS N
Sbjct: 564 -CSHEYHVHCIDRWLSENSTCPICRRAVLSSGN 595
>sp|Q9LZJ6|ATL5_ARATH RING-H2 finger protein ATL5 OS=Arabidopsis thaliana GN=ATL5 PE=2
SV=1
Length = 257
Score = 77.4 bits (189), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 35/85 (41%), Positives = 50/85 (58%), Gaps = 1/85 (1%)
Query: 77 LDQSLIDALPMFYYKDIVGLKEPFDCAVCLCEFSEHDNLRLLPSCSHAFHITCIDTWLLS 136
LD ++++ +P+F Y +C+VCL EF E D R+LP C H FH+ CIDTW S
Sbjct: 88 LDPTVLEKIPIFVYSVKTHESPLEECSVCLSEFEEDDEGRVLPKCGHVFHVDCIDTWFRS 147
Query: 137 NSTCPLCRGTLSSSDNSLE-NPVSS 160
S+CPLCR + + E PV++
Sbjct: 148 RSSCPLCRAPVQPAQPVTEPEPVAA 172
>sp|Q9XF63|ATL3_ARATH RING-H2 finger protein ATL3 OS=Arabidopsis thaliana GN=ATL3 PE=2
SV=1
Length = 324
Score = 77.4 bits (189), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 50/76 (65%), Gaps = 1/76 (1%)
Query: 72 LHDSGLDQSLIDALPMFYYKDIVGLKEPFDCAVCLCEFSEHDNLRLLPSCSHAFHITCID 131
L ++GL + +LP+ +++ K+ +C++CL E + D RLLP C+H+FH+ CID
Sbjct: 98 LSNTGLTSFELSSLPIVFFRQD-SCKDGLECSICLSELVKGDKARLLPKCNHSFHVECID 156
Query: 132 TWLLSNSTCPLCRGTL 147
W S+STCP+CR T+
Sbjct: 157 MWFQSHSTCPICRNTV 172
>sp|Q9LM69|ATL80_ARATH RING-H2 finger protein ATL80 OS=Arabidopsis thaliana GN=ATL80 PE=1
SV=1
Length = 197
Score = 77.0 bits (188), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 35/75 (46%), Positives = 47/75 (62%), Gaps = 1/75 (1%)
Query: 74 DSGLDQSLIDALPMFYYKDIVGLKEPF-DCAVCLCEFSEHDNLRLLPSCSHAFHITCIDT 132
+ GL + ++ +LP + E F +CA+CL EFS D LR+LP C H FH+ CIDT
Sbjct: 82 NKGLKKKVLQSLPKLTFSPESPESEKFAECAICLAEFSAGDELRVLPQCGHGFHVACIDT 141
Query: 133 WLLSNSTCPLCRGTL 147
WL S+S+CP CR L
Sbjct: 142 WLGSHSSCPSCRQIL 156
>sp|Q9NVW2|RNF12_HUMAN E3 ubiquitin-protein ligase RLIM OS=Homo sapiens GN=RLIM PE=1 SV=3
Length = 624
Score = 77.0 bits (188), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 39/93 (41%), Positives = 54/93 (58%), Gaps = 10/93 (10%)
Query: 66 LQQLFRLHDS------GLDQSLIDALPMFYYKDIVGLKEPFDCAVCLCEFSEHDNLRLLP 119
L Q F L++ GL + ID L M + + LK C+VC+ E++E + LR LP
Sbjct: 531 LAQFFLLNEDDDDQPRGLTKEQIDNLAMRSFGENDALK---TCSVCITEYTEGNKLRKLP 587
Query: 120 SCSHAFHITCIDTWLLSNSTCPLCRGTLSSSDN 152
CSH +H+ CID WL NSTCP+CR + +S N
Sbjct: 588 -CSHEYHVHCIDRWLSENSTCPICRRAVLASGN 619
>sp|O49691|ATL29_ARATH RING-H2 finger protein ATL29 OS=Arabidopsis thaliana GN=ATL29 PE=3
SV=1
Length = 289
Score = 76.6 bits (187), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 49/156 (31%), Positives = 70/156 (44%), Gaps = 41/156 (26%)
Query: 14 ISPVLLLILVIVAVVFFIFGLVHLLIRYLKKRPSPLPNHQSNRFPETTLQTQLQQLFRLH 73
++P L +IL ++ +VFF G L F + L T +Q +RLH
Sbjct: 19 VTPPLTVILTVILLVFFFIGFFTLY------------------FCKCFLDTMVQA-WRLH 59
Query: 74 -------------------DSGLDQSLIDALPMFYYKDIVGLKEP---FDCAVCLCEFSE 111
+ GL+ +I++ P F Y + L+E +CA+CL EF
Sbjct: 60 HGGDTVSDNPLQQPEAPPVNPGLELRIINSFPTFPYSSVKDLREEKYGLECAICLLEFDG 119
Query: 112 HDNLRLLPSCSHAFHITCIDTWLLSNSTCPLCRGTL 147
LRLL +C H FH CID W S+ TCP+CR L
Sbjct: 120 DHVLRLLTTCYHVFHQECIDLWFESHRTCPVCRRDL 155
>sp|Q9SN27|ATL59_ARATH E3 ubiquitin-protein ligase ATL59 OS=Arabidopsis thaliana GN=ATL59
PE=1 SV=1
Length = 225
Score = 76.3 bits (186), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 98/206 (47%), Gaps = 24/206 (11%)
Query: 7 PSSAT-SRISPVLLLILVIVAVVFFIFGLVHLLIRYLKKRPSPLPNHQSN--RFPETTLQ 63
PS++T S+I ++ V + V+ + LL+ Y+ +R S S+ F T
Sbjct: 11 PSNSTESQILKFTFIVCVPICVILIV-----LLVLYIMRRNSNTNVDWSSLGGFVPTNNN 65
Query: 64 TQLQQLFRLHDSGLDQSLIDALPMFYYKDIVGLKEPFDCAVCLCEFSEHDNLRLLPSCSH 123
+L GL + + + LP+ YK+ + + C+VCL ++ + L+ +PSC H
Sbjct: 66 LSTAEL------GLSKDIREMLPIVIYKESFTVNDT-QCSVCLGDYQAEEKLQQMPSCGH 118
Query: 124 AFHITCIDTWLLSNSTCPLCRGTLSSSDNSLENPVSSFDVSRE-ISTGFTTDEENGFSGR 182
FH+ CID WL S++TCPLCR +L P S D+S + I + + NG
Sbjct: 119 TFHMECIDLWLTSHTTCPLCRLSLI--------PKPSVDLSHQSIEIVSSIENTNGGEAS 170
Query: 183 HKPENVHESAAPKRVFSVRLGKFKSI 208
+P++ + A + V G SI
Sbjct: 171 TQPDSQSATEAIIHIDDVEEGNRDSI 196
>sp|Q7T037|RF12B_XENLA E3 ubiquitin-protein ligase RNF12-B OS=Xenopus laevis GN=rnf12-b
PE=2 SV=1
Length = 757
Score = 75.9 bits (185), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 38/85 (44%), Positives = 49/85 (57%), Gaps = 10/85 (11%)
Query: 66 LQQLFRLHDS------GLDQSLIDALPMFYYKDIVGLKEPFDCAVCLCEFSEHDNLRLLP 119
L Q F L++ GL + ID L Y + LK C+VC+ E++E + LR LP
Sbjct: 664 LAQFFLLNEDDDDQPRGLTKEQIDNLSTRNYGENDALK---TCSVCITEYTEGNKLRKLP 720
Query: 120 SCSHAFHITCIDTWLLSNSTCPLCR 144
CSH +HI CID WL NSTCP+CR
Sbjct: 721 -CSHEYHIHCIDRWLSENSTCPICR 744
>sp|Q9M313|ATL68_ARATH RING-H2 finger protein ATL68 OS=Arabidopsis thaliana GN=ATL68 PE=2
SV=1
Length = 212
Score = 75.1 bits (183), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 33/82 (40%), Positives = 49/82 (59%), Gaps = 11/82 (13%)
Query: 76 GLDQSLIDALPMFYY-KDIV----------GLKEPFDCAVCLCEFSEHDNLRLLPSCSHA 124
GLD S+I++ P F++ KDI G C++CLCE+ E + LR++P C H
Sbjct: 99 GLDHSVINSYPKFHFTKDITAVVNGDGFHDGEGRETTCSICLCEYMEEEMLRMMPECKHY 158
Query: 125 FHITCIDTWLLSNSTCPLCRGT 146
FH+ C+D WL N +CP+CR +
Sbjct: 159 FHVYCLDAWLKLNGSCPVCRNS 180
>sp|Q6NKR1|ATL28_ARATH RING-H2 finger protein ATL28 OS=Arabidopsis thaliana GN=ATL28 PE=2
SV=1
Length = 254
Score = 74.7 bits (182), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 31/74 (41%), Positives = 44/74 (59%)
Query: 74 DSGLDQSLIDALPMFYYKDIVGLKEPFDCAVCLCEFSEHDNLRLLPSCSHAFHITCIDTW 133
++GLD +I + P+F+Y +CA+CL EFS+ D +RL+ C H FH CID W
Sbjct: 75 NTGLDPFIIRSFPVFHYSSATKKNHGTECAICLSEFSDEDTVRLITVCRHPFHSNCIDLW 134
Query: 134 LLSNSTCPLCRGTL 147
+ TCP+CR L
Sbjct: 135 FELHKTCPVCRCEL 148
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.318 0.132 0.392
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 118,745,717
Number of Sequences: 539616
Number of extensions: 4913099
Number of successful extensions: 13710
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 304
Number of HSP's successfully gapped in prelim test: 159
Number of HSP's that attempted gapping in prelim test: 13229
Number of HSP's gapped (non-prelim): 488
length of query: 325
length of database: 191,569,459
effective HSP length: 118
effective length of query: 207
effective length of database: 127,894,771
effective search space: 26474217597
effective search space used: 26474217597
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 61 (28.1 bits)