BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 039647
(290 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P0CH30|RING1_GOSHI E3 ubiquitin-protein ligase RING1 OS=Gossypium hirsutum GN=RING1
PE=2 SV=1
Length = 338
Score = 135 bits (339), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 68/157 (43%), Positives = 100/157 (63%), Gaps = 8/157 (5%)
Query: 104 GHNAASSLDEYLVGPGLDLLLQHLLENDPNRYGSLSAQKEVVKALPMVAIDQDL------ 157
G +++ +Y +GPGL+ L+Q L ENDPNRYG+ A K ++ALP+V I +
Sbjct: 163 GFRLPANIGDYFIGPGLEQLIQQLAENDPNRYGTPPASKSAIEALPLVNITKSNLNSEFN 222
Query: 158 QCAVWLEEFVMGNEAKQMPYKHKFHGECLMPWLEFHSSCPICRYQLPSDNLKVQGNGPGN 217
QCAV +++F G EAKQMP KH +H +CL+PWLE H+SCP+CR++LP+D+ + G
Sbjct: 223 QCAVCMDDFEEGTEAKQMPCKHLYHKDCLLPWLELHNSCPVCRHELPTDDPDYERRVRGA 282
Query: 218 REESAGNEDVGNSLRLANGEDIIGNGRRNWIPIPWPF 254
+ S GN D NS + ++G++ R I +PWPF
Sbjct: 283 QGTSGGN-DGDNSGQRSDGDNRTVE-RSFRISLPWPF 317
>sp|Q8LPN7|RNG1L_ARATH E3 ubiquitin-protein ligase RING1-like OS=Arabidopsis thaliana
GN=At3g19950 PE=2 SV=1
Length = 328
Score = 127 bits (320), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 77/222 (34%), Positives = 111/222 (50%), Gaps = 20/222 (9%)
Query: 6 PFCETGFVEQMSSSITEDSIN-NGIHVGSDRALSLWVQILLRMMTG---LAPSQAEQERE 61
P C GF+E+ S+N N S ++ LL ++ G APS +
Sbjct: 43 PICNQGFLEEYEDPNPNQSLNFNPNSSDSFFPMADPFSTLLPLIFGSSAAAPSGMDFMSL 102
Query: 62 FESLLQRRRKRNSSAPLSHMLQDICF------GTASRPDDSEALRER----SGHNAASSL 111
F +Q + + P S F S E + E G+ +
Sbjct: 103 FGPSMQPQARSTQQNPQSDAFDPFTFLQNHLQTLRSSGTHFEFVIENHPSDPGNRMPGNF 162
Query: 112 DEYLVGPGLDLLLQHLLENDPNRYGSLSAQKEVVKALPMVAIDQDL------QCAVWLEE 165
+Y GPGL+ L+Q L ENDPNRYG+ A K + ALP V + +D+ QCAV ++E
Sbjct: 163 GDYFFGPGLEQLIQQLAENDPNRYGTPPASKSAIDALPTVKVTKDMLKSEMNQCAVCMDE 222
Query: 166 FVMGNEAKQMPYKHKFHGECLMPWLEFHSSCPICRYQLPSDN 207
F G++ KQMP KH FH +CL+PWLE H+SCP+CR++LP+D+
Sbjct: 223 FEDGSDVKQMPCKHVFHQDCLLPWLELHNSCPVCRFELPTDD 264
>sp|Q8RXD3|AIP2_ARATH E3 ubiquitin-protein ligase AIP2 OS=Arabidopsis thaliana GN=AIP2
PE=1 SV=1
Length = 310
Score = 82.0 bits (201), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 39/102 (38%), Positives = 66/102 (64%), Gaps = 11/102 (10%)
Query: 119 GLDLLLQHLLEND-PNRYGSLSAQKEVVKALPMVAIDQDL--------QCAVWLEEFVMG 169
GLD+++ +L++ P R + A KEVV+ LP++ ++L +C + E V+G
Sbjct: 183 GLDMIIPDILDDGGPPR--APPASKEVVEKLPVIIFTEELLKKFGAEAECCICKENLVIG 240
Query: 170 NEAKQMPYKHKFHGECLMPWLEFHSSCPICRYQLPSDNLKVQ 211
++ +++P KH FH CL PWL+ H+SCPICR++LP+D+ K +
Sbjct: 241 DKMQELPCKHTFHPPCLKPWLDEHNSCPICRHELPTDDQKYE 282
>sp|Q91YL2|RN126_MOUSE RING finger protein 126 OS=Mus musculus GN=Rnf126 PE=1 SV=1
Length = 313
Score = 79.7 bits (195), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 40/103 (38%), Positives = 56/103 (54%), Gaps = 8/103 (7%)
Query: 119 GLDLLLQHLLENDPNRYGSLSAQKEVVKALPMVAIDQD-----LQCAVWLEEFVMGNEAK 173
GLD ++ LL N G A KE ++ALP V + ++ L+C V E++ +G +
Sbjct: 187 GLDTIITQLL-NQFENTGPPPADKEKIQALPTVPVTEEHVGSGLECPVCKEDYALGESVR 245
Query: 174 QMPYKHKFHGECLMPWLEFHSSCPICRYQLPSDNLKVQGNGPG 216
Q+P H FH C++PWLE H SCP+CR L N N PG
Sbjct: 246 QLPCNHLFHDSCIVPWLEQHDSCPVCRKSLTGQNTAT--NPPG 286
>sp|Q6DIP3|RN126_XENTR RING finger protein 126 OS=Xenopus tropicalis GN=rnf126 PE=2 SV=1
Length = 311
Score = 78.2 bits (191), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 38/103 (36%), Positives = 56/103 (54%), Gaps = 8/103 (7%)
Query: 119 GLDLLLQHLLENDPNRYGSLSAQKEVVKALPMVAIDQD-----LQCAVWLEEFVMGNEAK 173
GLD ++ LL N G A E ++ALP + I ++ L+C V E++ +G +
Sbjct: 183 GLDTIITQLL-NQFENTGPPPADTEKIQALPTIQITEEHVGSGLECPVCKEDYTVGESVR 241
Query: 174 QMPYKHKFHGECLMPWLEFHSSCPICRYQLPSDNLKVQGNGPG 216
Q+P H FH +C++PWLE H +CP+CR L N N PG
Sbjct: 242 QLPCNHLFHNDCIIPWLEQHDTCPVCRKSLSGQNTAT--NPPG 282
>sp|Q7T0Q3|R126A_XENLA RING finger protein 126-A OS=Xenopus laevis GN=rnf126-a PE=2 SV=1
Length = 312
Score = 77.0 bits (188), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 38/103 (36%), Positives = 56/103 (54%), Gaps = 8/103 (7%)
Query: 119 GLDLLLQHLLENDPNRYGSLSAQKEVVKALPMVAIDQD-----LQCAVWLEEFVMGNEAK 173
GLD ++ LL N G A E ++ALP + I ++ L+C V E++ +G +
Sbjct: 184 GLDTIITQLL-NQFENTGPPPADNEKIQALPTIQITEEHVGSGLECPVCKEDYTVGECVR 242
Query: 174 QMPYKHKFHGECLMPWLEFHSSCPICRYQLPSDNLKVQGNGPG 216
Q+P H FH +C++PWLE H +CP+CR L N N PG
Sbjct: 243 QLPCNHLFHNDCIIPWLEQHDTCPVCRKSLSGQNTAT--NPPG 283
>sp|Q9BV68|RN126_HUMAN RING finger protein 126 OS=Homo sapiens GN=RNF126 PE=1 SV=1
Length = 326
Score = 77.0 bits (188), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 39/103 (37%), Positives = 56/103 (54%), Gaps = 8/103 (7%)
Query: 119 GLDLLLQHLLENDPNRYGSLSAQKEVVKALPMVAIDQD-----LQCAVWLEEFVMGNEAK 173
GLD ++ LL N G A KE ++ALP V + ++ L+C V +++ +G +
Sbjct: 185 GLDAIITQLL-NQFENTGPPPADKEKIQALPTVPVTEEHVGSGLECPVCKDDYALGERVR 243
Query: 174 QMPYKHKFHGECLMPWLEFHSSCPICRYQLPSDNLKVQGNGPG 216
Q+P H FH C++PWLE H SCP+CR L N N PG
Sbjct: 244 QLPCNHLFHDGCIVPWLEQHDSCPVCRKSLTGQNTAT--NPPG 284
>sp|Q6IRP0|R126B_XENLA RING finger protein 126-B OS=Xenopus laevis GN=rnf126-b PE=2 SV=1
Length = 312
Score = 77.0 bits (188), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 37/103 (35%), Positives = 56/103 (54%), Gaps = 8/103 (7%)
Query: 119 GLDLLLQHLLENDPNRYGSLSAQKEVVKALPMVAIDQD-----LQCAVWLEEFVMGNEAK 173
GLD ++ LL N G A + ++ALP + I ++ L+C V E++ +G +
Sbjct: 184 GLDTIITQLL-NQFENTGPPPADTDKIQALPTIQITEEHVGFGLECPVCKEDYTVGESVR 242
Query: 174 QMPYKHKFHGECLMPWLEFHSSCPICRYQLPSDNLKVQGNGPG 216
Q+P H FH +C++PWLE H +CP+CR L N N PG
Sbjct: 243 QLPCNHLFHNDCIIPWLEQHDTCPVCRKSLSGQNTAT--NPPG 283
>sp|Q0II22|RN126_BOVIN RING finger protein 126 OS=Bos taurus GN=RNF126 PE=2 SV=1
Length = 313
Score = 75.9 bits (185), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 37/101 (36%), Positives = 54/101 (53%), Gaps = 6/101 (5%)
Query: 119 GLDLLLQHLLENDPNRYGSLSAQKEVVKALPMVAIDQD-----LQCAVWLEEFVMGNEAK 173
GLD ++ LL N G A KE ++ALP V + ++ L+C V +++ +G +
Sbjct: 188 GLDAIITQLL-NQFENTGPPPADKEKIQALPTVPVTEEHVGSGLECPVCKDDYGLGEHVR 246
Query: 174 QMPYKHKFHGECLMPWLEFHSSCPICRYQLPSDNLKVQGNG 214
Q+P H FH C++PWLE H SCP+CR L N G
Sbjct: 247 QLPCNHLFHDGCIVPWLEQHDSCPVCRKSLTGQNTATDPPG 287
>sp|Q9Y4L5|RN115_HUMAN E3 ubiquitin-protein ligase RNF115 OS=Homo sapiens GN=RNF115 PE=1
SV=2
Length = 304
Score = 74.7 bits (182), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 40/111 (36%), Positives = 59/111 (53%), Gaps = 9/111 (8%)
Query: 119 GLDLLLQHLLENDPNRYGSLSAQKEVVKALPMVAIDQD-----LQCAVWLEEFVMGNEAK 173
GLD ++ LL N G A KE + +LP V + Q+ L+C V E++ + E +
Sbjct: 184 GLDAIVTQLLGQLENT-GPPPADKEKITSLPTVTVTQEQVDMGLECPVCKEDYTVEEEVR 242
Query: 174 QMPYKHKFHGECLMPWLEFHSSCPICRYQLPSDNLKVQGNGPGNREESAGN 224
Q+P H FH C++PWLE H +CP+CR L ++ Q + E SA N
Sbjct: 243 QLPCNHFFHSSCIVPWLELHDTCPVCRKSLNGEDSTRQSQ---STEASASN 290
>sp|Q9D0C1|RN115_MOUSE E3 ubiquitin-protein ligase RNF115 OS=Mus musculus GN=Rnf115 PE=1
SV=1
Length = 305
Score = 73.9 bits (180), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 34/90 (37%), Positives = 51/90 (56%), Gaps = 6/90 (6%)
Query: 119 GLDLLLQHLLENDPNRYGSLSAQKEVVKALPMVAIDQD-----LQCAVWLEEFVMGNEAK 173
GLD ++ LL N G A KE + +LP V + Q+ L+C V E++ + + +
Sbjct: 185 GLDAIVTQLLGQLENT-GPPPADKEKITSLPTVTVTQEQVNTGLECPVCKEDYTVEEKVR 243
Query: 174 QMPYKHKFHGECLMPWLEFHSSCPICRYQL 203
Q+P H FH C++PWLE H +CP+CR L
Sbjct: 244 QLPCNHFFHSSCIVPWLELHDTCPVCRKSL 273
>sp|Q7ZW78|RN181_DANRE E3 ubiquitin-protein ligase RNF181 OS=Danio rerio GN=rnf181 PE=2
SV=2
Length = 156
Score = 70.9 bits (172), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 33/73 (45%), Positives = 47/73 (64%), Gaps = 5/73 (6%)
Query: 140 AQKEVVKALPMVAI-----DQDLQCAVWLEEFVMGNEAKQMPYKHKFHGECLMPWLEFHS 194
A K VV++LP+V I D+ ++C V L EF ++MP KH FH C++PWL +
Sbjct: 55 AAKAVVQSLPVVIISPEQADKGVKCPVCLLEFEEQESVREMPCKHLFHTGCILPWLNKTN 114
Query: 195 SCPICRYQLPSDN 207
SCP+CR +LP+DN
Sbjct: 115 SCPLCRLELPTDN 127
>sp|Q5M974|RN181_XENTR E3 ubiquitin-protein ligase RNF181 OS=Xenopus tropicalis GN=rnf181
PE=2 SV=1
Length = 156
Score = 70.9 bits (172), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 32/73 (43%), Positives = 48/73 (65%), Gaps = 5/73 (6%)
Query: 140 AQKEVVKALPMVAI-----DQDLQCAVWLEEFVMGNEAKQMPYKHKFHGECLMPWLEFHS 194
A K+VV++LP V + D L+C V L EF G +Q+P +H FH C++PWL +
Sbjct: 55 AAKKVVESLPKVTVTPEQADAALKCPVCLLEFEEGETVRQLPCEHLFHSSCILPWLGKTN 114
Query: 195 SCPICRYQLPSDN 207
SCP+CR++LP+D+
Sbjct: 115 SCPLCRHELPTDS 127
>sp|Q6GPV5|RN181_XENLA E3 ubiquitin-protein ligase RNF181 OS=Xenopus laevis GN=rnf181 PE=2
SV=1
Length = 156
Score = 70.9 bits (172), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 32/73 (43%), Positives = 48/73 (65%), Gaps = 5/73 (6%)
Query: 140 AQKEVVKALPMVAI-----DQDLQCAVWLEEFVMGNEAKQMPYKHKFHGECLMPWLEFHS 194
A K+VV++LP V + D L+C V L EF G +Q+P +H FH C++PWL +
Sbjct: 55 ASKKVVESLPKVTVTPEQADAALKCPVCLLEFEEGETVRQLPCEHLFHSACILPWLGKTN 114
Query: 195 SCPICRYQLPSDN 207
SCP+CR++LP+D+
Sbjct: 115 SCPLCRHELPTDS 127
>sp|Q9CY62|RN181_MOUSE E3 ubiquitin-protein ligase RNF181 OS=Mus musculus GN=Rnf181 PE=2
SV=1
Length = 165
Score = 67.0 bits (162), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 31/71 (43%), Positives = 43/71 (60%), Gaps = 3/71 (4%)
Query: 140 AQKEVVKALPMVAIDQ---DLQCAVWLEEFVMGNEAKQMPYKHKFHGECLMPWLEFHSSC 196
A K VV++LP I DL+C V L EF +MP H FH C++PWL +SC
Sbjct: 66 AAKAVVESLPRTVISSAKADLKCPVCLLEFEAEETVIEMPCHHLFHSNCILPWLSKTNSC 125
Query: 197 PICRYQLPSDN 207
P+CR++LP+D+
Sbjct: 126 PLCRHELPTDD 136
>sp|Q9SPL2|CIP8_ARATH E3 ubiquitin-protein ligase CIP8 OS=Arabidopsis thaliana GN=CIP8
PE=1 SV=1
Length = 334
Score = 66.6 bits (161), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/127 (32%), Positives = 63/127 (49%), Gaps = 9/127 (7%)
Query: 94 DDSEALRERSGHNAASSLDEYLVGPGLDLLLQHLLENDPNRYGSLS----AQKEVVKALP 149
D+S R S A + D G + LLQ+L E D G A K ++AL
Sbjct: 183 DNSIEFRMESDRYAGNPADYIDDAAGYEALLQNLAEGDGGGGGGRRGAPPAAKSAIEALE 242
Query: 150 MVAIDQD-----LQCAVWLEEFVMGNEAKQMPYKHKFHGECLMPWLEFHSSCPICRYQLP 204
+ + CAV + VMG K++P H +HG+C++PWL +SCP+CR+QL
Sbjct: 243 TFEVSSSEGEMVMVCAVCKDGMVMGETGKKLPCGHCYHGDCIVPWLGTRNSCPVCRFQLE 302
Query: 205 SDNLKVQ 211
+D+ + +
Sbjct: 303 TDDAEYE 309
>sp|Q9P0P0|RN181_HUMAN E3 ubiquitin-protein ligase RNF181 OS=Homo sapiens GN=RNF181 PE=1
SV=1
Length = 153
Score = 63.5 bits (153), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/71 (45%), Positives = 43/71 (60%), Gaps = 3/71 (4%)
Query: 140 AQKEVVKALPMVAI---DQDLQCAVWLEEFVMGNEAKQMPYKHKFHGECLMPWLEFHSSC 196
A K VV+ LP I +L+C V L EF A +MP H FH C++PWL +SC
Sbjct: 54 AAKTVVENLPRTVIRGSQAELKCPVCLLEFEEEETAIEMPCHHLFHSSCILPWLSKTNSC 113
Query: 197 PICRYQLPSDN 207
P+CRY+LP+D+
Sbjct: 114 PLCRYELPTDD 124
>sp|Q9C1X4|YKW3_SCHPO Uncharacterized RING finger protein P32A8.03c
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=SPAP32A8.03c PE=4 SV=1
Length = 513
Score = 62.8 bits (151), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 46/87 (52%), Gaps = 5/87 (5%)
Query: 119 GLDLLLQHLLENDPNRYGSLSAQKEVVKAL-----PMVAIDQDLQCAVWLEEFVMGNEAK 173
GLD ++ L+E A ++V+ + P ID++ +C + +E F + ++
Sbjct: 351 GLDDIISQLMEQAQGHNAPAPAPEDVIAKMKVQKPPKELIDEEGECTICMEMFKINDDVI 410
Query: 174 QMPYKHKFHGECLMPWLEFHSSCPICR 200
Q+P KH FH C+ PWL + +C ICR
Sbjct: 411 QLPCKHYFHENCIKPWLRVNGTCAICR 437
>sp|Q6AXU4|RN181_RAT E3 ubiquitin-protein ligase RNF181 OS=Rattus norvegicus GN=Rnf181
PE=1 SV=1
Length = 165
Score = 60.5 bits (145), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/71 (42%), Positives = 43/71 (60%), Gaps = 3/71 (4%)
Query: 140 AQKEVVKALPMVAI---DQDLQCAVWLEEFVMGNEAKQMPYKHKFHGECLMPWLEFHSSC 196
A K VV++LP I +L+C V L EF +MP H FH C++PWL +SC
Sbjct: 66 AAKAVVESLPRTVIRSSKAELKCPVCLLEFEEEETVIEMPCHHLFHSNCILPWLSKTNSC 125
Query: 197 PICRYQLPSDN 207
P+CR++LP+D+
Sbjct: 126 PLCRHELPTDD 136
>sp|Q9VE61|RN181_DROME E3 ubiquitin-protein ligase RNF181 homolog OS=Drosophila
melanogaster GN=CG7694 PE=2 SV=1
Length = 147
Score = 60.1 bits (144), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 45/73 (61%), Gaps = 5/73 (6%)
Query: 140 AQKEVVKALPMVAIDQ-----DLQCAVWLEEFVMGNEAKQMPYKHKFHGECLMPWLEFHS 194
A K + LP+ I + DL+C+V E G + + +P KH+FH EC++ WL+ +
Sbjct: 46 ASKRAILELPVHEIVKSDEGGDLECSVCKEPAEEGQKYRILPCKHEFHEECILLWLKKTN 105
Query: 195 SCPICRYQLPSDN 207
SCP+CRY+L +D+
Sbjct: 106 SCPLCRYELETDD 118
>sp|Q3T0W3|RN181_BOVIN E3 ubiquitin-protein ligase RNF181 OS=Bos taurus GN=RNF181 PE=2
SV=1
Length = 153
Score = 59.3 bits (142), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 30/71 (42%), Positives = 42/71 (59%), Gaps = 3/71 (4%)
Query: 140 AQKEVVKALPMVAI---DQDLQCAVWLEEFVMGNEAKQMPYKHKFHGECLMPWLEFHSSC 196
A K V+ LP I +L+C V L EF A +MP H FH C++PWL +SC
Sbjct: 54 AAKTAVENLPRTVIRGSQAELKCPVCLLEFEEEETAIEMPCHHLFHSNCILPWLSKTNSC 113
Query: 197 PICRYQLPSDN 207
P+CR++LP+D+
Sbjct: 114 PLCRHELPTDD 124
>sp|Q9XF63|ATL3_ARATH RING-H2 finger protein ATL3 OS=Arabidopsis thaliana GN=ATL3 PE=2
SV=1
Length = 324
Score = 58.9 bits (141), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 26/62 (41%), Positives = 39/62 (62%), Gaps = 6/62 (9%)
Query: 145 VKALPMVAIDQD-----LQCAVWLEEFVMGNEAKQMPY-KHKFHGECLMPWLEFHSSCPI 198
+ +LP+V QD L+C++ L E V G++A+ +P H FH EC+ W + HS+CPI
Sbjct: 108 LSSLPIVFFRQDSCKDGLECSICLSELVKGDKARLLPKCNHSFHVECIDMWFQSHSTCPI 167
Query: 199 CR 200
CR
Sbjct: 168 CR 169
>sp|Q9NVW2|RNF12_HUMAN E3 ubiquitin-protein ligase RLIM OS=Homo sapiens GN=RLIM PE=1 SV=3
Length = 624
Score = 58.5 bits (140), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 33/100 (33%), Positives = 54/100 (54%), Gaps = 6/100 (6%)
Query: 105 HNAASSLDEYLVGPGLDLLLQHLL-ENDPNRYGSLSAQKEVVKALPMVAIDQD---LQCA 160
H A + DE P L L LL E+D ++ L+ KE + L M + ++ C+
Sbjct: 514 HRAPVTFDESGSLPFLSLAQFFLLNEDDDDQPRGLT--KEQIDNLAMRSFGENDALKTCS 571
Query: 161 VWLEEFVMGNEAKQMPYKHKFHGECLMPWLEFHSSCPICR 200
V + E+ GN+ +++P H++H C+ WL +S+CPICR
Sbjct: 572 VCITEYTEGNKLRKLPCSHEYHVHCIDRWLSENSTCPICR 611
>sp|Q9WTV7|RNF12_MOUSE E3 ubiquitin-protein ligase RLIM OS=Mus musculus GN=Rlim PE=1 SV=2
Length = 600
Score = 58.5 bits (140), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 33/100 (33%), Positives = 54/100 (54%), Gaps = 6/100 (6%)
Query: 105 HNAASSLDEYLVGPGLDLLLQHLL-ENDPNRYGSLSAQKEVVKALPMVAIDQD---LQCA 160
H A + DE P L L LL E+D ++ L+ KE + L M + ++ C+
Sbjct: 490 HRAPVTFDESGSLPFLSLAQFFLLNEDDEDQPRGLT--KEQIDNLAMRSFGENDALKTCS 547
Query: 161 VWLEEFVMGNEAKQMPYKHKFHGECLMPWLEFHSSCPICR 200
V + E+ GN+ +++P H++H C+ WL +S+CPICR
Sbjct: 548 VCITEYTEGNKLRKLPCSHEYHVHCIDRWLSENSTCPICR 587
>sp|O55176|PJA1_MOUSE E3 ubiquitin-protein ligase Praja-1 OS=Mus musculus GN=Pja1 PE=1
SV=3
Length = 578
Score = 58.5 bits (140), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 38/72 (52%), Gaps = 7/72 (9%)
Query: 140 AQKEVVKALPMV-------AIDQDLQCAVWLEEFVMGNEAKQMPYKHKFHGECLMPWLEF 192
A KE + ALP + A+ Q++ C + E+V G A ++P H FH C+ WL+
Sbjct: 504 ASKESIDALPEILVTEDHGAVGQEMCCPICCSEYVKGEVATELPCHHYFHKPCVSIWLQK 563
Query: 193 HSSCPICRYQLP 204
+CP+CR P
Sbjct: 564 SGTCPVCRCMFP 575
>sp|Q8NG27|PJA1_HUMAN E3 ubiquitin-protein ligase Praja-1 OS=Homo sapiens GN=PJA1 PE=1
SV=2
Length = 643
Score = 58.2 bits (139), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 38/72 (52%), Gaps = 7/72 (9%)
Query: 140 AQKEVVKALPMV-------AIDQDLQCAVWLEEFVMGNEAKQMPYKHKFHGECLMPWLEF 192
A KE + ALP + A+ Q++ C + E+V G A ++P H FH C+ WL+
Sbjct: 569 ASKESIDALPEILVTEDHGAVGQEMCCPICCSEYVKGEVATELPCHHYFHKPCVSIWLQK 628
Query: 193 HSSCPICRYQLP 204
+CP+CR P
Sbjct: 629 SGTCPVCRCMFP 640
>sp|Q5EAE9|ATL43_ARATH RING-H2 finger protein ATL43 OS=Arabidopsis thaliana GN=ATL43 PE=2
SV=2
Length = 407
Score = 57.0 bits (136), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 45/81 (55%), Gaps = 13/81 (16%)
Query: 134 RYGSLSAQKEVVKALPMVAIDQDLQCAVWLEEFVMGNEAKQMPY-KHKFHGECLMPWLEF 192
R+G+LS K+ L+CAV L F + +P KH FH EC+ WL+
Sbjct: 133 RFGALSGHKD------------GLECAVCLARFEPTEVLRLLPKCKHAFHVECVDTWLDA 180
Query: 193 HSSCPICRYQLPSDNLKVQGN 213
HS+CP+CRY++ +++ + G+
Sbjct: 181 HSTCPLCRYRVDPEDILLIGD 201
>sp|A5WWA0|ZNRF3_DANRE E3 ubiquitin-protein ligase ZNRF3 OS=Danio rerio GN=znrf3 PE=3 SV=2
Length = 868
Score = 56.2 bits (134), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 48/95 (50%), Gaps = 17/95 (17%)
Query: 159 CAVWLEEFVMGNEAKQMPYKHKFHGECLMPWLEFHSSCPICRYQLPSDNLKVQGNGPGNR 218
CA+ LE+++ G E + +P H+FH +C+ PWL H +CP CR+ + + + PG
Sbjct: 267 CAICLEKYIDGEELRVIPCAHRFHKKCVDPWLLQHHTCPHCRHNI----IDQKKGNPG-- 320
Query: 219 EESAGNEDVGNSLRLANGEDIIGNGRRNWIPIPWP 253
++ L G + G +R +P+ +P
Sbjct: 321 -----------AVCLDPGNPVHGRQQRVVLPVHYP 344
>sp|Q4KLR8|ZNRF3_XENLA E3 ubiquitin-protein ligase ZNRF3 OS=Xenopus laevis GN=znrf3 PE=2
SV=1
Length = 784
Score = 55.8 bits (133), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 38/63 (60%), Gaps = 2/63 (3%)
Query: 159 CAVWLEEFVMGNEAKQMPYKHKFHGECLMPWLEFHSSCPICRYQLPSDNLKVQGNGPGNR 218
CA+ LE+++ G E + +P H+FH C+ PWL + +CP CR+ + K G+GPG
Sbjct: 202 CAICLEKYIDGEELRVIPCTHRFHKRCVDPWLLQNHTCPHCRHNIIEQ--KKGGHGPGCV 259
Query: 219 EES 221
E S
Sbjct: 260 ENS 262
>sp|Q9Y252|RNF6_HUMAN E3 ubiquitin-protein ligase RNF6 OS=Homo sapiens GN=RNF6 PE=1 SV=1
Length = 685
Score = 55.8 bits (133), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 38/63 (60%), Gaps = 2/63 (3%)
Query: 152 AIDQDLQ--CAVWLEEFVMGNEAKQMPYKHKFHGECLMPWLEFHSSCPICRYQLPSDNLK 209
+ID +L C+V + ++V GN+ +Q+P H+FH C+ WL + +CPICR + N+
Sbjct: 623 SIDSELGKICSVCISDYVTGNKLRQLPCMHEFHIHCIDRWLSENCTCPICRQPVLGSNIA 682
Query: 210 VQG 212
G
Sbjct: 683 NNG 685
>sp|Q5SSZ7|ZNRF3_MOUSE E3 ubiquitin-protein ligase ZNRF3 OS=Mus musculus GN=Znrf3 PE=2
SV=1
Length = 913
Score = 55.1 bits (131), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 44/92 (47%), Gaps = 6/92 (6%)
Query: 159 CAVWLEEFVMGNEAKQMPYKHKFHGECLMPWLEFHSSCPICRYQLPSDNLKVQGNGPGNR 218
CA+ LE+++ G E + +P H+FH +C+ PWL H +CP CR+ N+ Q PG
Sbjct: 290 CAICLEKYIDGEELRVIPCTHRFHRKCVDPWLLQHHTCPHCRH-----NIIEQKGNPGAV 344
Query: 219 EESAGNEDVGNSLRLANGEDIIGN-GRRNWIP 249
N G R+ G R N IP
Sbjct: 345 CVETSNLTRGRQPRVTLPVHYPGRVHRTNAIP 376
>sp|Q9ULT6|ZNRF3_HUMAN E3 ubiquitin-protein ligase ZNRF3 OS=Homo sapiens GN=ZNRF3 PE=1
SV=3
Length = 936
Score = 54.7 bits (130), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 31/45 (68%)
Query: 159 CAVWLEEFVMGNEAKQMPYKHKFHGECLMPWLEFHSSCPICRYQL 203
CA+ LE+++ G E + +P H+FH +C+ PWL H +CP CR+ +
Sbjct: 293 CAICLEKYIDGEELRVIPCTHRFHRKCVDPWLLQHHTCPHCRHNI 337
>sp|Q8H7N9|ATL31_ORYSJ E3 ubiquitin-protein ligase Os03g0188200 OS=Oryza sativa subsp.
japonica GN=Os03g0188200 PE=2 SV=1
Length = 353
Score = 54.3 bits (129), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 38/73 (52%), Gaps = 11/73 (15%)
Query: 142 KEVVKALP----------MVAIDQDLQCAVWLEEFVMGNEAKQMPYK-HKFHGECLMPWL 190
KEVV+A P M A L+CAV L EF +E + +P H FH +C+ PWL
Sbjct: 106 KEVVEAFPTAVYGDVKARMAAKSGPLECAVCLAEFADSDELRVLPACCHVFHPDCIDPWL 165
Query: 191 EFHSSCPICRYQL 203
+CP+CR L
Sbjct: 166 AAAVTCPLCRANL 178
>sp|Q8LF65|ATL17_ARATH RING-H2 finger protein ATL17 OS=Arabidopsis thaliana GN=ATL17 PE=2
SV=2
Length = 235
Score = 53.9 bits (128), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/105 (29%), Positives = 48/105 (45%), Gaps = 17/105 (16%)
Query: 144 VVKALPMVAIDQ-----DLQCAVWLEEFVMGNEAKQMP-YKHKFHGECLMPWLEFHSSCP 197
++K+LP+ ++C+V L EF + MP KH FH C+ W HSSCP
Sbjct: 56 IIKSLPIFTFSAVTALFAMECSVCLSEFKDNESGRVMPNCKHTFHVHCIDMWFHSHSSCP 115
Query: 198 ICRYQLPS---------DNLKVQGNGP--GNREESAGNEDVGNSL 231
+CR Q+ D + + + P G+ G E G+S+
Sbjct: 116 LCRSQIEPFAGGVKSSMDEVAISISDPVYGDTNHHEGTETTGDSV 160
>sp|A8WWR3|HRDL1_CAEBR E3 ubiquitin-protein ligase hrd-like protein 1 OS=Caenorhabditis
briggsae GN=hrdl-1 PE=3 SV=1
Length = 578
Score = 53.9 bits (128), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/138 (28%), Positives = 60/138 (43%), Gaps = 25/138 (18%)
Query: 114 YLVGPGLDLLLQHLLENDPNRYGSLSAQ-----------KEVVKALPMV-AIDQDLQCAV 161
++ PGL+L L + Y + Q + + A P V A + D +C V
Sbjct: 293 FVFAPGLNLTSIFFLYHMKLTYNCMREQLGRHRTHKKIFEHIESAYPSVKAANSDDRCIV 352
Query: 162 WLEEFVMGNEAKQMPYKHKFHGECLMPWLEFHSSCPICRYQLPSDNLKVQGNGPGNREES 221
E ++G ++++P H+FH CLM WL SSCP CRY +PS + GN
Sbjct: 353 CWE--LLGT-SRRLPCSHQFHDWCLMWWLAQDSSCPTCRYVIPSPQEEASRTDSGN---- 405
Query: 222 AGNEDVGNSLRLANGEDI 239
GN++ NG
Sbjct: 406 ------GNTMFRFNGRTF 417
>sp|Q9SN28|ATL7_ARATH RING-H2 finger protein ATL7 OS=Arabidopsis thaliana GN=ATL7 PE=2
SV=1
Length = 236
Score = 53.9 bits (128), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 46/85 (54%), Gaps = 9/85 (10%)
Query: 138 LSAQKEVVKALPMVA-----IDQDLQCAVWLEEFVMGNEAKQMP-YKHKFHGECLMPWLE 191
L K++ + LP+V I +D QC+V L ++ + +QMP H FH EC+ WL
Sbjct: 85 LGLSKDIREMLPVVIYKESFIVKDSQCSVCLGDYQAEEKLQQMPSCGHTFHMECIDLWLT 144
Query: 192 FHSSCPICRYQL---PSDNLKVQGN 213
H++CP+CR L PS +L Q
Sbjct: 145 SHTTCPLCRLSLIPKPSLDLSHQST 169
>sp|Q6NQG7|ATL78_ARATH RING-H2 finger protein ATL78 OS=Arabidopsis thaliana GN=ATL78 PE=2
SV=1
Length = 219
Score = 53.9 bits (128), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 42/83 (50%), Gaps = 8/83 (9%)
Query: 129 ENDPNRYGSLSAQKEVVKALPMVAIDQDL-------QCAVWLEEFVMGNEAKQMPYKHK- 180
+N P R + +++ +K+ V+ +L +CA+ L EFV K +P H
Sbjct: 94 DNYPVRLTNTGVKRKALKSFQTVSYSTELNLPGLDTECAICLSEFVAEERVKLLPTCHHG 153
Query: 181 FHGECLMPWLEFHSSCPICRYQL 203
FH C+ WL HSSCP CR+ L
Sbjct: 154 FHVRCIDKWLSSHSSCPTCRHCL 176
>sp|Q641J8|RF12A_XENLA E3 ubiquitin-protein ligase RNF12-A OS=Xenopus laevis GN=rnf12-a
PE=1 SV=1
Length = 622
Score = 53.5 bits (127), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 17/42 (40%), Positives = 29/42 (69%)
Query: 159 CAVWLEEFVMGNEAKQMPYKHKFHGECLMPWLEFHSSCPICR 200
C+V + E+ GN+ +++P H++H C+ WL +S+CPICR
Sbjct: 568 CSVCITEYTEGNKLRKLPCSHEYHIHCIDRWLSENSTCPICR 609
>sp|Q8W571|ATL32_ARATH RING-H2 finger protein ATL32 OS=Arabidopsis thaliana GN=ATL32 PE=2
SV=3
Length = 323
Score = 53.5 bits (127), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 44/87 (50%), Gaps = 15/87 (17%)
Query: 144 VVKALPMVAID---------QDLQCAVWLEEFVMGNEAKQMPY-KHKFHGECLMPWLEFH 193
VV++ P+ A +DL+CA+ L E + +P H FH +C+ WL H
Sbjct: 100 VVESFPVFAYSSVKESKIGSKDLECAICLNELEDHETVRLLPICNHLFHIDCIDTWLYSH 159
Query: 194 SSCPICRYQLPSDNLKVQGNGPGNREE 220
++CP+CR NL + N PG+ ++
Sbjct: 160 ATCPVCR-----SNLTAKSNKPGDEDD 181
>sp|Q9DBU5|RNF6_MOUSE E3 ubiquitin-protein ligase RNF6 OS=Mus musculus GN=Rnf6 PE=1 SV=1
Length = 667
Score = 53.5 bits (127), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 37/66 (56%), Gaps = 7/66 (10%)
Query: 142 KEVVKALPMVAIDQD-------LQCAVWLEEFVMGNEAKQMPYKHKFHGECLMPWLEFHS 194
KE + L + +QD C+V + ++V GN+ +Q+P H+FH C+ WL +
Sbjct: 590 KEQIDNLSTRSYEQDGVDSELGKVCSVCISDYVAGNKLRQLPCLHEFHIHCIDRWLSENC 649
Query: 195 SCPICR 200
+CP+CR
Sbjct: 650 TCPVCR 655
>sp|Q07G42|RNF12_XENTR E3 ubiquitin-protein ligase RNF12 OS=Xenopus tropicalis GN=rnf12
PE=2 SV=1
Length = 639
Score = 53.5 bits (127), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 17/42 (40%), Positives = 29/42 (69%)
Query: 159 CAVWLEEFVMGNEAKQMPYKHKFHGECLMPWLEFHSSCPICR 200
C+V + E+ GN+ +++P H++H C+ WL +S+CPICR
Sbjct: 585 CSVCITEYTEGNKLRKLPCSHEYHVHCIDRWLSENSTCPICR 626
>sp|Q9SN27|ATL59_ARATH E3 ubiquitin-protein ligase ATL59 OS=Arabidopsis thaliana GN=ATL59
PE=1 SV=1
Length = 225
Score = 53.5 bits (127), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 45/84 (53%), Gaps = 9/84 (10%)
Query: 138 LSAQKEVVKALPMVAIDQ-----DLQCAVWLEEFVMGNEAKQMP-YKHKFHGECLMPWLE 191
L K++ + LP+V + D QC+V L ++ + +QMP H FH EC+ WL
Sbjct: 71 LGLSKDIREMLPIVIYKESFTVNDTQCSVCLGDYQAEEKLQQMPSCGHTFHMECIDLWLT 130
Query: 192 FHSSCPICRYQL---PSDNLKVQG 212
H++CP+CR L PS +L Q
Sbjct: 131 SHTTCPLCRLSLIPKPSVDLSHQS 154
>sp|Q7T037|RF12B_XENLA E3 ubiquitin-protein ligase RNF12-B OS=Xenopus laevis GN=rnf12-b
PE=2 SV=1
Length = 757
Score = 53.5 bits (127), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 17/42 (40%), Positives = 29/42 (69%)
Query: 159 CAVWLEEFVMGNEAKQMPYKHKFHGECLMPWLEFHSSCPICR 200
C+V + E+ GN+ +++P H++H C+ WL +S+CPICR
Sbjct: 703 CSVCITEYTEGNKLRKLPCSHEYHIHCIDRWLSENSTCPICR 744
>sp|Q570X5|ATL58_ARATH RING-H2 finger protein ATL58 OS=Arabidopsis thaliana GN=ATL58 PE=2
SV=1
Length = 261
Score = 53.5 bits (127), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 42/72 (58%), Gaps = 6/72 (8%)
Query: 138 LSAQKEVVKALPMVAIDQ-----DLQCAVWLEEFVMGNEAKQMPY-KHKFHGECLMPWLE 191
L KE+ + LP+V + D QC+V L ++ ++ +Q+P KH FH +C+ WL
Sbjct: 74 LGLSKELREMLPIVVFKESFTVMDSQCSVCLGDYQPNDKLQQIPVCKHTFHMDCIDLWLT 133
Query: 192 FHSSCPICRYQL 203
H++CP+CR L
Sbjct: 134 SHTTCPLCRLAL 145
>sp|Q9M2S6|SDIR1_ARATH E3 ubiquitin-protein ligase SDIR1 OS=Arabidopsis thaliana GN=SDIR1
PE=1 SV=1
Length = 273
Score = 53.1 bits (126), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 31/49 (63%)
Query: 154 DQDLQCAVWLEEFVMGNEAKQMPYKHKFHGECLMPWLEFHSSCPICRYQ 202
+ +L C+V LE+ +G + +P H+FH C+ PWL +CP+C+++
Sbjct: 206 EDELTCSVCLEQVTVGEIVRTLPCLHQFHAGCIDPWLRQQGTCPVCKFR 254
>sp|Q9SL78|ATL12_ARATH Putative RING-H2 finger protein ATL12 OS=Arabidopsis thaliana
GN=ATL12 PE=3 SV=1
Length = 390
Score = 53.1 bits (126), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/102 (33%), Positives = 55/102 (53%), Gaps = 11/102 (10%)
Query: 121 DLLLQHLLENDPNRYGSLSAQKEVVKALP------MVAIDQDLQCAVWLEEFVMGNEAKQ 174
D L Q L N +R+ L K+ +++LP + + Q L+C+V L +F +
Sbjct: 83 DRLWQGLF-NRSSRFSGL--DKKAIESLPFFRFSALKGLKQGLECSVCLSKFEDVEILRL 139
Query: 175 MPY-KHKFHGECLMPWLEFHSSCPICRYQLP-SDNLKVQGNG 214
+P +H FH C+ WLE H++CP+CR ++ D+L V GN
Sbjct: 140 LPKCRHAFHIGCIDQWLEQHATCPLCRNRVNIEDDLSVLGNS 181
>sp|Q8LC69|ATL8_ARATH RING-H2 finger protein ATL8 OS=Arabidopsis thaliana GN=ATL8 PE=2
SV=2
Length = 185
Score = 52.8 bits (125), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 40/71 (56%), Gaps = 8/71 (11%)
Query: 141 QKEVVKALPMVAIDQD-------LQCAVWLEEFVMGNEAKQMP-YKHKFHGECLMPWLEF 192
+K+V+++LP + D ++CA+ L EF G+E + +P H FH C+ WL
Sbjct: 79 KKKVLRSLPKLTYSPDSPPAEKLVECAICLTEFAAGDELRVLPQCGHGFHVSCIDTWLGS 138
Query: 193 HSSCPICRYQL 203
HSSCP CR L
Sbjct: 139 HSSCPSCRQIL 149
>sp|Q08D68|ZNRF3_XENTR E3 ubiquitin-protein ligase ZNRF3 OS=Xenopus tropicalis GN=znrf3
PE=2 SV=1
Length = 853
Score = 52.8 bits (125), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 38/64 (59%), Gaps = 2/64 (3%)
Query: 159 CAVWLEEFVMGNEAKQMPYKHKFHGECLMPWLEFHSSCPICRYQLPSDNLKVQGNGPGNR 218
CA+ LE+++ G E + +P H+FH C+ PWL + +CP CR+ + K G+GP
Sbjct: 266 CAICLEKYIDGEELRVIPCTHRFHKRCVDPWLLQNHTCPHCRHNIIEQ--KKGGHGPVCV 323
Query: 219 EESA 222
E S+
Sbjct: 324 ENSS 327
>sp|Q80U04|PJA2_MOUSE E3 ubiquitin-protein ligase Praja-2 OS=Mus musculus GN=Pja2 PE=1
SV=2
Length = 707
Score = 52.4 bits (124), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 35/72 (48%), Gaps = 7/72 (9%)
Query: 140 AQKEVVKALP-------MVAIDQDLQCAVWLEEFVMGNEAKQMPYKHKFHGECLMPWLEF 192
A KE + LP AI Q+ C + E++ + A ++P H FH C+ WL+
Sbjct: 607 ASKESIDGLPETLVLEDHTAIGQEQCCPICCSEYIKDDIATELPCHHFFHKPCVSIWLQK 666
Query: 193 HSSCPICRYQLP 204
+CP+CR P
Sbjct: 667 SGTCPVCRRHFP 678
>sp|Q63364|PJA2_RAT E3 ubiquitin-protein ligase Praja-2 OS=Rattus norvegicus GN=Pja2
PE=2 SV=1
Length = 707
Score = 52.4 bits (124), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 35/72 (48%), Gaps = 7/72 (9%)
Query: 140 AQKEVVKALP-------MVAIDQDLQCAVWLEEFVMGNEAKQMPYKHKFHGECLMPWLEF 192
A KE + LP AI Q+ C + E++ + A ++P H FH C+ WL+
Sbjct: 607 ASKESIDGLPETLVLEDHTAIGQEQCCPICCSEYIKDDIATELPCHHFFHKPCVSIWLQK 666
Query: 193 HSSCPICRYQLP 204
+CP+CR P
Sbjct: 667 SGTCPVCRRHFP 678
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.316 0.132 0.399
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 115,071,995
Number of Sequences: 539616
Number of extensions: 5045791
Number of successful extensions: 10809
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 268
Number of HSP's successfully gapped in prelim test: 60
Number of HSP's that attempted gapping in prelim test: 10486
Number of HSP's gapped (non-prelim): 340
length of query: 290
length of database: 191,569,459
effective HSP length: 116
effective length of query: 174
effective length of database: 128,974,003
effective search space: 22441476522
effective search space used: 22441476522
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 61 (28.1 bits)