Query 039648
Match_columns 254
No_of_seqs 125 out of 1337
Neff 9.2
Searched_HMMs 29240
Date Mon Mar 25 20:24:45 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/039648.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/039648hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3ii7_A Kelch-like protein 7; p 99.1 6.2E-08 2.1E-12 81.5 22.4 207 10-236 51-279 (306)
2 2vpj_A Kelch-like protein 12; 99.0 1.6E-07 5.6E-12 78.7 23.4 206 10-236 58-285 (301)
3 2xn4_A Kelch-like protein 2; s 99.0 1.1E-07 3.9E-12 79.8 22.3 205 11-236 58-283 (302)
4 1zgk_A Kelch-like ECH-associat 99.0 2.2E-07 7.4E-12 78.5 23.2 191 26-237 91-295 (308)
5 4asc_A Kelch repeat and BTB do 99.0 1E-07 3.5E-12 80.6 21.0 191 27-235 69-283 (315)
6 2woz_A Kelch repeat and BTB do 99.0 1.6E-07 5.6E-12 79.5 20.8 190 27-235 80-293 (318)
7 2vpj_A Kelch-like protein 12; 98.8 1.7E-06 5.7E-11 72.5 21.0 191 25-236 31-238 (301)
8 3ii7_A Kelch-like protein 7; p 98.7 1.5E-06 5.1E-11 73.0 19.6 190 25-236 24-232 (306)
9 2xn4_A Kelch-like protein 2; s 98.7 2.3E-06 7.9E-11 71.7 20.5 190 26-236 31-236 (302)
10 4asc_A Kelch repeat and BTB do 98.7 2E-06 7E-11 72.6 19.4 196 26-236 14-228 (315)
11 1zgk_A Kelch-like ECH-associat 98.7 9.8E-07 3.3E-11 74.4 17.2 194 26-236 40-247 (308)
12 2uvk_A YJHT; unknown function, 98.7 2E-06 6.7E-11 73.9 18.6 216 10-237 15-302 (357)
13 2woz_A Kelch repeat and BTB do 98.5 2E-05 6.9E-10 66.5 20.1 206 14-236 15-238 (318)
14 2zwa_A Leucine carboxyl methyl 98.3 1.2E-05 4.2E-10 75.5 15.4 198 26-237 413-643 (695)
15 2uvk_A YJHT; unknown function, 98.2 0.00069 2.4E-08 57.8 22.5 145 89-235 167-348 (357)
16 1k3i_A Galactose oxidase precu 97.6 0.0046 1.6E-07 57.4 17.8 191 26-236 220-504 (656)
17 2zwa_A Leucine carboxyl methyl 97.3 0.0028 9.4E-08 59.5 13.2 146 89-237 411-591 (695)
18 1k3i_A Galactose oxidase precu 96.3 0.024 8.3E-07 52.5 10.7 144 89-235 157-329 (656)
19 3jrp_A Fusion protein of prote 84.5 15 0.00051 29.9 19.6 134 91-230 80-241 (379)
20 3jro_A Fusion protein of prote 84.1 27 0.00092 32.4 18.0 180 26-230 32-239 (753)
21 4gga_A P55CDC, cell division c 83.8 19 0.00064 30.4 18.6 193 12-234 114-315 (420)
22 3mbr_X Glutamine cyclotransfer 81.1 19 0.00067 28.7 15.4 98 128-237 42-142 (243)
23 4e54_B DNA damage-binding prot 80.9 25 0.00085 29.9 13.1 189 14-232 131-330 (435)
24 3ei3_B DNA damage-binding prot 78.8 26 0.00089 28.8 21.1 190 12-231 82-284 (383)
25 3nol_A Glutamine cyclotransfer 76.6 29 0.00098 28.1 14.3 108 116-237 54-164 (262)
26 2z2n_A Virginiamycin B lyase; 71.7 33 0.0011 26.7 22.3 184 12-233 107-299 (299)
27 3nok_A Glutaminyl cyclase; bet 68.4 46 0.0016 27.0 12.0 111 110-237 58-173 (268)
28 3scy_A Hypothetical bacterial 67.1 50 0.0017 26.9 13.1 102 130-235 234-345 (361)
29 1ri6_A Putative isomerase YBHE 65.9 48 0.0016 26.3 10.8 102 130-235 201-316 (343)
30 2iwa_A Glutamine cyclotransfer 64.9 54 0.0018 26.4 12.8 98 129-237 44-144 (266)
31 1k8k_C P40, ARP2/3 complex 41 64.4 40 0.0014 27.2 9.2 70 160-234 19-88 (372)
32 3q7m_A Lipoprotein YFGL, BAMB; 63.9 60 0.002 26.7 12.9 110 110-235 48-168 (376)
33 3q7m_A Lipoprotein YFGL, BAMB; 60.1 70 0.0024 26.2 13.9 96 130-235 114-213 (376)
34 3u4y_A Uncharacterized protein 58.5 67 0.0023 25.5 22.0 190 11-232 6-210 (331)
35 3dwl_C Actin-related protein 2 58.3 73 0.0025 25.8 11.7 192 12-232 20-239 (377)
36 3dsm_A Uncharacterized protein 57.7 75 0.0026 25.7 18.1 139 91-237 65-221 (328)
37 4aez_A CDC20, WD repeat-contai 57.4 82 0.0028 26.1 19.1 187 14-233 104-297 (401)
38 4gga_A P55CDC, cell division c 56.0 89 0.003 26.1 11.0 87 140-233 93-182 (420)
39 3f3f_A Nucleoporin SEH1; struc 55.8 71 0.0024 25.0 9.1 68 160-231 22-92 (351)
40 4aez_A CDC20, WD repeat-contai 54.5 91 0.0031 25.8 19.4 98 129-233 284-384 (401)
41 3v9f_A Two-component system se 52.9 1.4E+02 0.0048 27.5 13.3 105 119-235 421-530 (781)
42 3hfq_A Uncharacterized protein 51.8 91 0.0031 25.0 16.2 74 160-237 250-327 (347)
43 3g4e_A Regucalcin; six bladed 49.4 96 0.0033 24.5 21.7 192 12-238 22-239 (297)
44 3m0c_C LDL receptor, low-densi 47.5 1.9E+02 0.0063 27.3 23.9 152 58-232 473-635 (791)
45 1l0q_A Surface layer protein; 47.0 1.1E+02 0.0039 24.7 22.1 182 15-234 2-194 (391)
46 3mmy_A MRNA export factor; mRN 45.9 1.1E+02 0.0038 24.2 10.4 70 161-235 54-123 (368)
47 1evh_A WH1 domain, protein (ME 45.9 31 0.0011 23.9 4.5 41 26-76 12-52 (112)
48 3mmy_A MRNA export factor; mRN 45.8 1.1E+02 0.0038 24.2 17.5 29 201-232 279-307 (368)
49 1yr2_A Prolyl oligopeptidase; 45.6 1.8E+02 0.0062 26.6 15.7 140 91-235 295-447 (741)
50 2ojh_A Uncharacterized protein 43.5 1.1E+02 0.0036 23.3 20.4 101 129-235 153-264 (297)
51 1egx_A VAsp, vasodilator-stimu 43.2 35 0.0012 23.8 4.4 42 26-76 12-53 (115)
52 1k8k_C P40, ARP2/3 complex 41 42.3 1.3E+02 0.0044 24.0 18.6 192 12-232 17-236 (372)
53 4gqb_B Methylosome protein 50; 42.0 1.4E+02 0.0048 24.3 9.5 60 170-233 101-162 (344)
54 2hqs_A Protein TOLB; TOLB, PAL 41.1 1.6E+02 0.0054 24.7 20.5 181 25-236 203-394 (415)
55 1n7d_A LDL receptor, low-densi 41.0 1.5E+02 0.0052 27.3 9.7 132 91-233 476-618 (699)
56 4ggc_A P55CDC, cell division c 40.2 1.3E+02 0.0044 23.3 11.3 88 141-234 14-103 (318)
57 3jrp_A Fusion protein of prote 39.9 1.4E+02 0.0048 23.7 12.2 65 161-230 69-135 (379)
58 1ddw_A GLGF-domain protein hom 39.5 42 0.0014 23.6 4.4 39 26-76 12-51 (120)
59 3hfq_A Uncharacterized protein 38.2 1.5E+02 0.0052 23.6 17.9 114 116-235 52-178 (347)
60 1l0q_A Surface layer protein; 37.0 1.7E+02 0.0057 23.7 21.6 182 17-234 88-280 (391)
61 2qc5_A Streptogramin B lactona 36.0 1.5E+02 0.005 22.8 21.9 188 12-237 28-225 (300)
62 3k26_A Polycomb protein EED; W 36.0 1.6E+02 0.0055 23.2 8.4 65 161-229 299-366 (366)
63 3q6k_A 43.2 kDa salivary prote 35.1 86 0.0029 26.8 6.5 80 110-189 90-198 (381)
64 3scy_A Hypothetical bacterial 35.0 1.7E+02 0.006 23.4 12.1 94 130-229 30-129 (361)
65 2hes_X YDR267CP; beta-propelle 34.7 1.7E+02 0.006 23.3 9.4 61 170-233 127-188 (330)
66 3frx_A Guanine nucleotide-bind 34.2 1.7E+02 0.006 23.1 8.7 67 162-232 31-99 (319)
67 3dwl_C Actin-related protein 2 34.0 39 0.0013 27.5 4.2 59 170-231 75-133 (377)
68 3bws_A Protein LP49; two-domai 32.8 2.1E+02 0.007 23.5 22.3 192 12-234 178-395 (433)
69 1pjx_A Dfpase, DIISOPROPYLFLUO 31.9 1.8E+02 0.0061 22.6 16.7 186 26-238 47-266 (314)
70 1i2h_A PSD-ZIP45(homer-1C/VESL 31.7 62 0.0021 24.2 4.4 39 26-76 17-56 (168)
71 3nol_A Glutamine cyclotransfer 30.8 2.1E+02 0.0071 23.0 14.1 133 90-238 65-211 (262)
72 2lyd_A Decapping protein 1; DC 30.7 72 0.0025 22.9 4.5 29 208-240 30-58 (134)
73 3ow8_A WD repeat-containing pr 30.5 2.1E+02 0.007 22.8 9.3 60 169-232 55-114 (321)
74 1rmk_A MU-O-conotoxin mrvib; b 29.7 7.4 0.00025 20.0 -0.7 13 8-20 15-27 (31)
75 1gxr_A ESG1, transducin-like e 29.5 2E+02 0.0068 22.3 12.8 69 160-233 108-176 (337)
76 1ri6_A Putative isomerase YBHE 29.2 2E+02 0.0069 22.4 13.4 101 130-235 152-270 (343)
77 2xzh_A Clathrin heavy chain 1; 29.0 1.4E+02 0.0049 25.2 6.6 39 198-240 260-302 (365)
78 3jro_A Fusion protein of prote 28.6 3.4E+02 0.012 24.8 11.5 65 161-230 67-133 (753)
79 2z2n_A Virginiamycin B lyase; 28.3 2E+02 0.0068 22.0 22.8 191 10-238 21-221 (299)
80 3zwl_B Eukaryotic translation 28.1 2.2E+02 0.0075 22.4 9.3 69 160-235 43-111 (369)
81 1q7f_A NHL, brain tumor CG1071 27.7 2.1E+02 0.0071 22.0 22.3 198 12-237 38-246 (286)
82 2hqs_A Protein TOLB; TOLB, PAL 27.0 2.7E+02 0.0094 23.2 21.1 182 25-235 159-350 (415)
83 4e54_B DNA damage-binding prot 27.0 2.7E+02 0.0093 23.1 16.1 56 171-233 377-434 (435)
84 3hrp_A Uncharacterized protein 26.2 2.9E+02 0.0099 23.2 12.9 115 110-235 134-255 (409)
85 4g56_B MGC81050 protein; prote 24.9 2.5E+02 0.0087 22.7 7.7 60 171-233 114-174 (357)
86 3f3f_A Nucleoporin SEH1; struc 24.8 2.4E+02 0.0082 21.7 14.6 67 161-231 71-145 (351)
87 1kv9_A Type II quinohemoprotei 24.6 4E+02 0.014 24.2 11.6 116 110-235 61-193 (668)
88 1pby_B Quinohemoprotein amine 23.8 2.5E+02 0.0087 21.7 11.9 99 130-238 220-320 (337)
89 4aow_A Guanine nucleotide-bind 23.6 2.6E+02 0.0089 21.7 10.7 57 170-232 193-249 (340)
90 2dk7_A Transcription elongatio 23.4 75 0.0026 20.2 3.0 14 219-232 29-42 (73)
91 2oiz_A Aromatic amine dehydrog 23.2 2.2E+02 0.0075 23.3 7.0 57 174-237 286-342 (361)
92 3no2_A Uncharacterized protein 23.0 2.7E+02 0.0093 21.8 9.3 98 128-234 98-200 (276)
93 2bkl_A Prolyl endopeptidase; m 22.9 4.2E+02 0.014 23.8 20.9 190 26-236 203-404 (695)
94 3tc9_A Hypothetical hydrolase; 22.9 3.5E+02 0.012 22.9 11.4 103 116-232 151-260 (430)
95 3hxj_A Pyrrolo-quinoline quino 22.8 2.7E+02 0.0093 21.7 9.5 19 129-147 157-175 (330)
96 3g4e_A Regucalcin; six bladed 21.1 3E+02 0.01 21.5 13.2 103 116-229 26-139 (297)
97 3dm0_A Maltose-binding peripla 20.8 4.5E+02 0.015 23.5 9.3 60 170-233 403-465 (694)
98 2jp2_A Spred-2, sprouty-relate 20.6 1.2E+02 0.004 21.4 4.0 40 26-76 21-65 (126)
No 1
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=99.06 E-value=6.2e-08 Score=81.54 Aligned_cols=207 Identities=10% Similarity=-0.006 Sum_probs=129.2
Q ss_pred EeccCceEEEEEcC----CccEEEEcCcccccccCCCCCCCCCCCCCCCCcceEEEEeeCCCCCeEEEEEeeeecccccc
Q 039648 10 VGYHDGLFCIMQSS----TNRLTIWNPATREFRNLPNYKYCNSSNRLIPPSTFICLESDPINNDFKLLFVHNLWNEKRKR 85 (254)
Q Consensus 10 ~~scnGLlcl~~~~----~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~g~g~d~~~~~yKVv~~~~~~~~~~~~ 85 (254)
....+|.|.+.... ..++.++||.|++|..+|+.+..+ ..+ ....++ =||+.+.... . +
T Consensus 51 ~~~~~~~lyv~GG~~~~~~~~~~~~d~~~~~W~~~~~~p~~r-------~~~-~~~~~~-----~~iyv~GG~~-~---~ 113 (306)
T 3ii7_A 51 CVFWDNVVYILGGSQLFPIKRMDCYNVVKDSWYSKLGPPTPR-------DSL-AACAAE-----GKIYTSGGSE-V---G 113 (306)
T ss_dssp EEEETTEEEEECCBSSSBCCEEEEEETTTTEEEEEECCSSCC-------BSC-EEEEET-----TEEEEECCBB-T---T
T ss_pred EEEECCEEEEEeCCCCCCcceEEEEeCCCCeEEECCCCCccc-------cce-eEEEEC-----CEEEEECCCC-C---C
Confidence 33456665544321 235799999999999998766431 111 121222 2566654321 0 1
Q ss_pred CCCcCeEEEEEccCCceeeccccC------ceEEEE-EEEEEEEecCC-C----ceEEEEEECCCcceeEec-CCCCCCc
Q 039648 86 YGKVPNVQVYGFRTNSWREVHGHQ------LDRYFK-VCYWLVIADTR-D----LKVILSFHMDNEVFEEIK-IPPHVNY 152 (254)
Q Consensus 86 ~~~~~~~~Vys~~~~~Wr~~~~~p------~~v~~~-~lyWl~~~~~~-~----~~~IvsfD~~~e~~~~i~-~P~~~~~ 152 (254)
......+++|+..+++|+.+..+| ..+.++ .+|-+...... . ...+..||+++++|+.++ +|... .
T Consensus 114 ~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r-~ 192 (306)
T 3ii7_A 114 NSALYLFECYDTRTESWHTKPSMLTQRCSHGMVEANGLIYVCGGSLGNNVSGRVLNSCEVYDPATETWTELCPMIEAR-K 192 (306)
T ss_dssp BSCCCCEEEEETTTTEEEEECCCSSCCBSCEEEEETTEEEEECCEESCTTTCEECCCEEEEETTTTEEEEECCCSSCC-B
T ss_pred CcEeeeEEEEeCCCCceEeCCCCcCCcceeEEEEECCEEEEECCCCCCCCcccccceEEEeCCCCCeEEECCCccchh-h
Confidence 234567999999999999987774 345667 88877543211 1 356899999999999984 44333 4
Q ss_pred eeEEEEeCCeEEEEecC--CCCEEEEEEECC-CcceEEEEEecCCCcceeeEEEEeCCeEEEEeCcc--ccCCEEEEEEC
Q 039648 153 YSSISLYEDSLSIVIPD--AEQCFEIWVMND-NKCWAKHLTLGPFFNFRINFGFWKNDAFFIESNSR--IYGGCLFLHEH 227 (254)
Q Consensus 153 ~~~l~~~~g~L~~~~~~--~~~~~~IW~l~~-~~~W~~~~~i~~~~~~~~~~~~~~~g~i~l~~~~~--~~~~~~~~yd~ 227 (254)
....+..+++|.++... ....-++|+++- ...|+++-.++... ...-.. .-++.|++.-... .....+..||+
T Consensus 193 ~~~~~~~~~~i~v~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r-~~~~~~-~~~~~i~v~GG~~~~~~~~~~~~yd~ 270 (306)
T 3ii7_A 193 NHGLVFVKDKIFAVGGQNGLGGLDNVEYYDIKLNEWKMVSPMPWKG-VTVKCA-AVGSIVYVLAGFQGVGRLGHILEYNT 270 (306)
T ss_dssp SCEEEEETTEEEEECCEETTEEBCCEEEEETTTTEEEECCCCSCCB-SCCEEE-EETTEEEEEECBCSSSBCCEEEEEET
T ss_pred cceEEEECCEEEEEeCCCCCCCCceEEEeeCCCCcEEECCCCCCCc-cceeEE-EECCEEEEEeCcCCCeeeeeEEEEcC
Confidence 56677889999999842 112235777775 67899875554322 111222 2266776664310 01357899999
Q ss_pred CCCcEEEEE
Q 039648 228 RTKEIKNLQ 236 (254)
Q Consensus 228 ~t~~~~~~~ 236 (254)
++++|+.+.
T Consensus 271 ~~~~W~~~~ 279 (306)
T 3ii7_A 271 ETDKWVANS 279 (306)
T ss_dssp TTTEEEEEE
T ss_pred CCCeEEeCC
Confidence 999999874
No 2
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=99.02 E-value=1.6e-07 Score=78.70 Aligned_cols=206 Identities=7% Similarity=-0.007 Sum_probs=127.3
Q ss_pred EeccCceEEEEEc-C----CccEEEEcCcccc---cccCCCCCCCCCCCCCCCCcceEEEEeeCCCCCeEEEEEeeeecc
Q 039648 10 VGYHDGLFCIMQS-S----TNRLTIWNPATRE---FRNLPNYKYCNSSNRLIPPSTFICLESDPINNDFKLLFVHNLWNE 81 (254)
Q Consensus 10 ~~scnGLlcl~~~-~----~~~~~V~NP~T~~---~~~LP~~~~~~~~~~~~~~~~~~g~g~d~~~~~yKVv~~~~~~~~ 81 (254)
....+|-+.+... . ...++++||.|++ |..+|+.+..+ ..+... .++ =|++.+.....
T Consensus 58 ~~~~~~~l~v~GG~~~~~~~~~~~~~d~~~~~~~~W~~~~~~p~~r-------~~~~~~-~~~-----~~lyv~GG~~~- 123 (301)
T 2vpj_A 58 SVSLHDRIYVIGGYDGRSRLSSVECLDYTADEDGVWYSVAPMNVRR-------GLAGAT-TLG-----DMIYVSGGFDG- 123 (301)
T ss_dssp EEEETTEEEEECCBCSSCBCCCEEEEETTCCTTCCCEEECCCSSCC-------BSCEEE-EET-----TEEEEECCBCS-
T ss_pred EEEECCEEEEEcCCCCCccCceEEEEECCCCCCCeeEECCCCCCCc-------cceeEE-EEC-----CEEEEEcccCC-
Confidence 3345665554332 1 2357999999999 99998766531 111111 222 25666643211
Q ss_pred ccccCCCcCeEEEEEccCCceeeccccC------ceEEEE-EEEEEEEecCC-CceEEEEEECCCcceeEec-CCCCCCc
Q 039648 82 KRKRYGKVPNVQVYGFRTNSWREVHGHQ------LDRYFK-VCYWLVIADTR-DLKVILSFHMDNEVFEEIK-IPPHVNY 152 (254)
Q Consensus 82 ~~~~~~~~~~~~Vys~~~~~Wr~~~~~p------~~v~~~-~lyWl~~~~~~-~~~~IvsfD~~~e~~~~i~-~P~~~~~ 152 (254)
......+++|+..+++|+.+..+| ..+.++ .+|-+...... ....+..||+++++|+.++ +|... .
T Consensus 124 ----~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r-~ 198 (301)
T 2vpj_A 124 ----SRRHTSMERYDPNIDQWSMLGDMQTAREGAGLVVASGVIYCLGGYDGLNILNSVEKYDPHTGHWTNVTPMATKR-S 198 (301)
T ss_dssp ----SCBCCEEEEEETTTTEEEEEEECSSCCBSCEEEEETTEEEEECCBCSSCBCCCEEEEETTTTEEEEECCCSSCC-B
T ss_pred ----CcccceEEEEcCCCCeEEECCCCCCCcccceEEEECCEEEEECCCCCCcccceEEEEeCCCCcEEeCCCCCccc-c
Confidence 122457899999999999987663 345567 88876533211 1356899999999999984 44333 4
Q ss_pred eeEEEEeCCeEEEEecCC--CCEEEEEEECC-CcceEEEEEecCCCcceeeEEEEeCCeEEEEeCccc--cCCEEEEEEC
Q 039648 153 YSSISLYEDSLSIVIPDA--EQCFEIWVMND-NKCWAKHLTLGPFFNFRINFGFWKNDAFFIESNSRI--YGGCLFLHEH 227 (254)
Q Consensus 153 ~~~l~~~~g~L~~~~~~~--~~~~~IW~l~~-~~~W~~~~~i~~~~~~~~~~~~~~~g~i~l~~~~~~--~~~~~~~yd~ 227 (254)
....+..+++|.++.... ...-++|+++- ..+|+++-.++... ...-.. .-++.|++.-.... ....+..||+
T Consensus 199 ~~~~~~~~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r-~~~~~~-~~~~~i~v~GG~~~~~~~~~v~~yd~ 276 (301)
T 2vpj_A 199 GAGVALLNDHIYVVGGFDGTAHLSSVEAYNIRTDSWTTVTSMTTPR-CYVGAT-VLRGRLYAIAGYDGNSLLSSIECYDP 276 (301)
T ss_dssp SCEEEEETTEEEEECCBCSSSBCCCEEEEETTTTEEEEECCCSSCC-BSCEEE-EETTEEEEECCBCSSSBEEEEEEEET
T ss_pred cceEEEECCEEEEEeCCCCCcccceEEEEeCCCCcEEECCCCCCcc-cceeEE-EECCEEEEEcCcCCCcccccEEEEcC
Confidence 456778899999998421 11345677665 68899886554332 111222 23667766643110 0146899999
Q ss_pred CCCcEEEEE
Q 039648 228 RTKEIKNLQ 236 (254)
Q Consensus 228 ~t~~~~~~~ 236 (254)
++++|+.+.
T Consensus 277 ~~~~W~~~~ 285 (301)
T 2vpj_A 277 IIDSWEVVT 285 (301)
T ss_dssp TTTEEEEEE
T ss_pred CCCeEEEcC
Confidence 999999873
No 3
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=99.02 E-value=1.1e-07 Score=79.75 Aligned_cols=205 Identities=11% Similarity=0.105 Sum_probs=127.1
Q ss_pred eccCceEEEEEc-C----CccEEEEcCcccccccCCCCCCCCCCCCCCCCcceEEEEeeCCCCCeEEEEEeeeecccccc
Q 039648 11 GYHDGLFCIMQS-S----TNRLTIWNPATREFRNLPNYKYCNSSNRLIPPSTFICLESDPINNDFKLLFVHNLWNEKRKR 85 (254)
Q Consensus 11 ~scnGLlcl~~~-~----~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~g~g~d~~~~~yKVv~~~~~~~~~~~~ 85 (254)
...+|-|.+... . ..++.++||.|++|..+|+.+..+ ..+... .++ =+++.+.....
T Consensus 58 ~~~~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r-------~~~~~~-~~~-----~~iyv~GG~~~----- 119 (302)
T 2xn4_A 58 VYMAGLVFAVGGFNGSLRVRTVDSYDPVKDQWTSVANMRDRR-------STLGAA-VLN-----GLLYAVGGFDG----- 119 (302)
T ss_dssp EEETTEEEEESCBCSSSBCCCEEEEETTTTEEEEECCCSSCC-------BSCEEE-EET-----TEEEEEEEECS-----
T ss_pred EEECCEEEEEeCcCCCccccceEEECCCCCceeeCCCCCccc-------cceEEE-EEC-----CEEEEEcCCCC-----
Confidence 344666555432 1 134799999999999999765531 111111 122 15555543211
Q ss_pred CCCcCeEEEEEccCCceeeccccC------ceEEEE-EEEEEEEecCCC---ceEEEEEECCCcceeEec-CCCCCCcee
Q 039648 86 YGKVPNVQVYGFRTNSWREVHGHQ------LDRYFK-VCYWLVIADTRD---LKVILSFHMDNEVFEEIK-IPPHVNYYS 154 (254)
Q Consensus 86 ~~~~~~~~Vys~~~~~Wr~~~~~p------~~v~~~-~lyWl~~~~~~~---~~~IvsfD~~~e~~~~i~-~P~~~~~~~ 154 (254)
......+++|+..++.|+.+..+| ..+.++ .+|-+....... ...+..||+++++|+.++ +|... ...
T Consensus 120 ~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r-~~~ 198 (302)
T 2xn4_A 120 STGLSSVEAYNIKSNEWFHVAPMNTRRSSVGVGVVGGLLYAVGGYDVASRQCLSTVECYNATTNEWTYIAEMSTRR-SGA 198 (302)
T ss_dssp SCEEEEEEEEETTTTEEEEECCCSSCCBSCEEEEETTEEEEECCEETTTTEECCCEEEEETTTTEEEEECCCSSCC-BSC
T ss_pred CccCceEEEEeCCCCeEeecCCCCCcccCceEEEECCEEEEEeCCCCCCCccccEEEEEeCCCCcEEECCCCcccc-ccc
Confidence 122347899999999999997764 345667 888775332211 246899999999999983 44333 445
Q ss_pred EEEEeCCeEEEEecCC--CCEEEEEEECC-CcceEEEEEecCCCcceeeEEEEeCCeEEEEeCcc--ccCCEEEEEECCC
Q 039648 155 SISLYEDSLSIVIPDA--EQCFEIWVMND-NKCWAKHLTLGPFFNFRINFGFWKNDAFFIESNSR--IYGGCLFLHEHRT 229 (254)
Q Consensus 155 ~l~~~~g~L~~~~~~~--~~~~~IW~l~~-~~~W~~~~~i~~~~~~~~~~~~~~~g~i~l~~~~~--~~~~~~~~yd~~t 229 (254)
..+..+++|.++.... ...-++|+++- ...|+++..++... ....+ +.-++.|++.-... .....+..||+++
T Consensus 199 ~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~r-~~~~~-~~~~~~i~v~GG~~~~~~~~~v~~yd~~~ 276 (302)
T 2xn4_A 199 GVGVLNNLLYAVGGHDGPLVRKSVEVYDPTTNAWRQVADMNMCR-RNAGV-CAVNGLLYVVGGDDGSCNLASVEYYNPTT 276 (302)
T ss_dssp EEEEETTEEEEECCBSSSSBCCCEEEEETTTTEEEEECCCSSCC-BSCEE-EEETTEEEEECCBCSSSBCCCEEEEETTT
T ss_pred cEEEECCEEEEECCCCCCcccceEEEEeCCCCCEeeCCCCCCcc-ccCeE-EEECCEEEEECCcCCCcccccEEEEcCCC
Confidence 6778899999998421 12335777776 68899976555332 11112 22366777664321 0124589999999
Q ss_pred CcEEEEE
Q 039648 230 KEIKNLQ 236 (254)
Q Consensus 230 ~~~~~~~ 236 (254)
++|+.+.
T Consensus 277 ~~W~~~~ 283 (302)
T 2xn4_A 277 DKWTVVS 283 (302)
T ss_dssp TEEEECS
T ss_pred CeEEECC
Confidence 9999874
No 4
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=99.00 E-value=2.2e-07 Score=78.45 Aligned_cols=191 Identities=9% Similarity=0.028 Sum_probs=121.2
Q ss_pred cEEEEcCcccccccCCCCCCCCCCCCCCCCcceEEEEeeCCCCCeEEEEEeeeeccccccCCCcCeEEEEEccCCceeec
Q 039648 26 RLTIWNPATREFRNLPNYKYCNSSNRLIPPSTFICLESDPINNDFKLLFVHNLWNEKRKRYGKVPNVQVYGFRTNSWREV 105 (254)
Q Consensus 26 ~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~g~g~d~~~~~yKVv~~~~~~~~~~~~~~~~~~~~Vys~~~~~Wr~~ 105 (254)
++.++||.|++|..+|+.+..+ ..... ..++ =||+.+..... ......+++|+..+++|+.+
T Consensus 91 ~~~~~d~~~~~W~~~~~~p~~r-------~~~~~-~~~~-----~~iyv~GG~~~-----~~~~~~~~~yd~~~~~W~~~ 152 (308)
T 1zgk_A 91 ALDCYNPMTNQWSPCAPMSVPR-------NRIGV-GVID-----GHIYAVGGSHG-----CIHHNSVERYEPERDEWHLV 152 (308)
T ss_dssp CEEEEETTTTEEEECCCCSSCC-------BTCEE-EEET-----TEEEEECCEET-----TEECCCEEEEETTTTEEEEC
T ss_pred eEEEECCCCCeEeECCCCCcCc-------cccEE-EEEC-----CEEEEEcCCCC-----CcccccEEEECCCCCeEeEC
Confidence 4799999999999998766531 11111 1222 15666643211 12235789999999999998
Q ss_pred cccC------ceEEEE-EEEEEEEecCC-CceEEEEEECCCcceeEec-CCCCCCceeEEEEeCCeEEEEecC--CCCEE
Q 039648 106 HGHQ------LDRYFK-VCYWLVIADTR-DLKVILSFHMDNEVFEEIK-IPPHVNYYSSISLYEDSLSIVIPD--AEQCF 174 (254)
Q Consensus 106 ~~~p------~~v~~~-~lyWl~~~~~~-~~~~IvsfD~~~e~~~~i~-~P~~~~~~~~l~~~~g~L~~~~~~--~~~~~ 174 (254)
..+| ..+.++ .+|-+...... ....+..||+++++|+.++ +|... .....+..+++|.++... ....-
T Consensus 153 ~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r-~~~~~~~~~~~iyv~GG~~~~~~~~ 231 (308)
T 1zgk_A 153 APMLTRRIGVGVAVLNRLLYAVGGFDGTNRLNSAECYYPERNEWRMITAMNTIR-SGAGVCVLHNCIYAAGGYDGQDQLN 231 (308)
T ss_dssp CCCSSCCBSCEEEEETTEEEEECCBCSSCBCCCEEEEETTTTEEEECCCCSSCC-BSCEEEEETTEEEEECCBCSSSBCC
T ss_pred CCCCccccceEEEEECCEEEEEeCCCCCCcCceEEEEeCCCCeEeeCCCCCCcc-ccceEEEECCEEEEEeCCCCCCccc
Confidence 7764 345667 88876533211 1356999999999999884 34332 445667789999999842 12245
Q ss_pred EEEEECC-CcceEEEEEecCCCcceeeEEEEeCCeEEEEeCcc--ccCCEEEEEECCCCcEEEEEE
Q 039648 175 EIWVMND-NKCWAKHLTLGPFFNFRINFGFWKNDAFFIESNSR--IYGGCLFLHEHRTKEIKNLQV 237 (254)
Q Consensus 175 ~IW~l~~-~~~W~~~~~i~~~~~~~~~~~~~~~g~i~l~~~~~--~~~~~~~~yd~~t~~~~~~~~ 237 (254)
++|+++- ...|+++..++... ...-.. .-++.|++.-... .....+..||+++++|+.+.-
T Consensus 232 ~v~~yd~~~~~W~~~~~~p~~r-~~~~~~-~~~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~~~ 295 (308)
T 1zgk_A 232 SVERYDVETETWTFVAPMKHRR-SALGIT-VHQGRIYVLGGYDGHTFLDSVECYDPDTDTWSEVTR 295 (308)
T ss_dssp CEEEEETTTTEEEECCCCSSCC-BSCEEE-EETTEEEEECCBCSSCBCCEEEEEETTTTEEEEEEE
T ss_pred eEEEEeCCCCcEEECCCCCCCc-cceEEE-EECCEEEEEcCcCCCcccceEEEEcCCCCEEeecCC
Confidence 6777775 68999876554322 111122 2366776664311 113578999999999998743
No 5
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=98.99 E-value=1e-07 Score=80.64 Aligned_cols=191 Identities=8% Similarity=0.000 Sum_probs=121.0
Q ss_pred EEEEcCcccccccCCCCCCCCCCCCCCCCcceEEEEeeCCCCCeEEEEEeeeeccccccCCCcCeEEEEEccCCceeecc
Q 039648 27 LTIWNPATREFRNLPNYKYCNSSNRLIPPSTFICLESDPINNDFKLLFVHNLWNEKRKRYGKVPNVQVYGFRTNSWREVH 106 (254)
Q Consensus 27 ~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~g~g~d~~~~~yKVv~~~~~~~~~~~~~~~~~~~~Vys~~~~~Wr~~~ 106 (254)
++++||.|++|..+|+.|..+ ..+.. ..++ =||+.+...... .+......+++|+..+++|+.+.
T Consensus 69 ~~~~d~~~~~W~~~~~~p~~r-------~~~~~-~~~~-----~~lyv~GG~~~~--~~~~~~~~~~~~d~~~~~W~~~~ 133 (315)
T 4asc_A 69 FLQFDHLDSEWLGMPPLPSPR-------CLFGL-GEAL-----NSIYVVGGREIK--DGERCLDSVMCYDRLSFKWGESD 133 (315)
T ss_dssp EEEEETTTTEEEECCCBSSCE-------ESCEE-EEET-----TEEEEECCEESS--TTCCBCCCEEEEETTTTEEEECC
T ss_pred eEEecCCCCeEEECCCCCcch-------hceeE-EEEC-----CEEEEEeCCcCC--CCCcccceEEEECCCCCcEeECC
Confidence 789999999999998876431 11111 1121 256666442110 11234557899999999999998
Q ss_pred ccC------ceEEEE-EEEEEEEecC--CCceEEEEEECCCcceeEec-CCCCCCceeEEEEeCCeEEEEec-C-CCCEE
Q 039648 107 GHQ------LDRYFK-VCYWLVIADT--RDLKVILSFHMDNEVFEEIK-IPPHVNYYSSISLYEDSLSIVIP-D-AEQCF 174 (254)
Q Consensus 107 ~~p------~~v~~~-~lyWl~~~~~--~~~~~IvsfD~~~e~~~~i~-~P~~~~~~~~l~~~~g~L~~~~~-~-~~~~~ 174 (254)
.+| ..+.++ .+|-+..... .....+..||+++++|+.++ +|... .....+..+++|.++.. . ....-
T Consensus 134 ~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r-~~~~~~~~~~~iyv~GG~~~~~~~~ 212 (315)
T 4asc_A 134 PLPYVVYGHTVLSHMDLVYVIGGKGSDRKCLNKMCVYDPKKFEWKELAPMQTAR-SLFGATVHDGRIIVAAGVTDTGLTS 212 (315)
T ss_dssp CCSSCCBSCEEEEETTEEEEECCBCTTSCBCCCEEEEETTTTEEEECCCCSSCC-BSCEEEEETTEEEEEEEECSSSEEE
T ss_pred CCCCcccceeEEEECCEEEEEeCCCCCCcccceEEEEeCCCCeEEECCCCCCch-hceEEEEECCEEEEEeccCCCCccc
Confidence 764 345667 8887754311 11357999999999999884 44333 44567788999999984 2 22344
Q ss_pred EEEEECC-CcceEEEEEecCCCcceeeEEEEeCCeEEEEeCcc-----------ccCCEEEEEECCCCcEEEE
Q 039648 175 EIWVMND-NKCWAKHLTLGPFFNFRINFGFWKNDAFFIESNSR-----------IYGGCLFLHEHRTKEIKNL 235 (254)
Q Consensus 175 ~IW~l~~-~~~W~~~~~i~~~~~~~~~~~~~~~g~i~l~~~~~-----------~~~~~~~~yd~~t~~~~~~ 235 (254)
++|+++- ...|+++-.++... ....+. .-++.|++.-... .....+..||+++++|+.+
T Consensus 213 ~~~~yd~~~~~W~~~~~~p~~r-~~~~~~-~~~~~l~v~GG~~~~~~~~~~~~~~~~~~v~~yd~~~~~W~~~ 283 (315)
T 4asc_A 213 SAEVYSITDNKWAPFEAFPQER-SSLSLV-SLVGTLYAIGGFATLETESGELVPTELNDIWRYNEEEKKWEGV 283 (315)
T ss_dssp EEEEEETTTTEEEEECCCSSCC-BSCEEE-EETTEEEEEEEEEEEECTTSCEEEEEEEEEEEEETTTTEEEEE
T ss_pred eEEEEECCCCeEEECCCCCCcc-cceeEE-EECCEEEEECCccccCcCCccccccccCcEEEecCCCChhhhh
Confidence 7888876 68999986554322 111222 2255665543210 0013578999999999988
No 6
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=98.95 E-value=1.6e-07 Score=79.53 Aligned_cols=190 Identities=11% Similarity=0.054 Sum_probs=120.5
Q ss_pred EEEEcCcccccccCCCCCCCCCCCCCCCCcceEEEEeeCCCCCeEEEEEeeeeccccccCCCcCeEEEEEccCCceeecc
Q 039648 27 LTIWNPATREFRNLPNYKYCNSSNRLIPPSTFICLESDPINNDFKLLFVHNLWNEKRKRYGKVPNVQVYGFRTNSWREVH 106 (254)
Q Consensus 27 ~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~g~g~d~~~~~yKVv~~~~~~~~~~~~~~~~~~~~Vys~~~~~Wr~~~ 106 (254)
++++||.|++|..+|+.|..+ ..+... .++ =||+.+...... +......+++|+..+++|+.+.
T Consensus 80 ~~~~d~~~~~W~~~~~~p~~r-------~~~~~~-~~~-----~~iyv~GG~~~~---~~~~~~~~~~yd~~~~~W~~~~ 143 (318)
T 2woz_A 80 FFQLDNVSSEWVGLPPLPSAR-------CLFGLG-EVD-----DKIYVVAGKDLQ---TEASLDSVLCYDPVAAKWSEVK 143 (318)
T ss_dssp EEEEETTTTEEEECSCBSSCB-------CSCEEE-EET-----TEEEEEEEEBTT---TCCEEEEEEEEETTTTEEEEEC
T ss_pred EEEEeCCCCcEEECCCCCccc-------cccceE-EEC-----CEEEEEcCccCC---CCcccceEEEEeCCCCCEeECC
Confidence 789999999999998766531 111111 122 256665442110 1123457899999999999987
Q ss_pred ccC------ceEEEE-EEEEEEEecC--CCceEEEEEECCCcceeEec-CCCCCCceeEEEEeCCeEEEEecC--CCCEE
Q 039648 107 GHQ------LDRYFK-VCYWLVIADT--RDLKVILSFHMDNEVFEEIK-IPPHVNYYSSISLYEDSLSIVIPD--AEQCF 174 (254)
Q Consensus 107 ~~p------~~v~~~-~lyWl~~~~~--~~~~~IvsfD~~~e~~~~i~-~P~~~~~~~~l~~~~g~L~~~~~~--~~~~~ 174 (254)
.+| ..+..+ .+|-+..... .....+..||+++++|+.++ +|... .....+..+|+|.++... ....-
T Consensus 144 ~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r-~~~~~~~~~~~iyv~GG~~~~~~~~ 222 (318)
T 2woz_A 144 NLPIKVYGHNVISHNGMIYCLGGKTDDKKCTNRVFIYNPKKGDWKDLAPMKTPR-SMFGVAIHKGKIVIAGGVTEDGLSA 222 (318)
T ss_dssp CCSSCEESCEEEEETTEEEEECCEESSSCBCCCEEEEETTTTEEEEECCCSSCC-BSCEEEEETTEEEEEEEEETTEEEE
T ss_pred CCCCcccccEEEEECCEEEEEcCCCCCCCccceEEEEcCCCCEEEECCCCCCCc-ccceEEEECCEEEEEcCcCCCCccc
Confidence 664 345666 8887754321 11346999999999999984 44332 445667889999999842 22235
Q ss_pred EEEEECC-CcceEEEEEecCCCcceeeEEEEeCCeEEEEeCcc-----------ccCCEEEEEECCCCcEEEE
Q 039648 175 EIWVMND-NKCWAKHLTLGPFFNFRINFGFWKNDAFFIESNSR-----------IYGGCLFLHEHRTKEIKNL 235 (254)
Q Consensus 175 ~IW~l~~-~~~W~~~~~i~~~~~~~~~~~~~~~g~i~l~~~~~-----------~~~~~~~~yd~~t~~~~~~ 235 (254)
++|+++- ...|+++..++... ....+. ..++.|++.-... .....+..||+++++|+.+
T Consensus 223 ~~~~yd~~~~~W~~~~~~p~~r-~~~~~~-~~~~~i~v~GG~~~~~~~~~~~~~~~~~~v~~yd~~~~~W~~~ 293 (318)
T 2woz_A 223 SVEAFDLKTNKWEVMTEFPQER-SSISLV-SLAGSLYAIGGFAMIQLESKEFAPTEVNDIWKYEDDKKEWAGM 293 (318)
T ss_dssp EEEEEETTTCCEEECCCCSSCC-BSCEEE-EETTEEEEECCBCCBC----CCBCCBCCCEEEEETTTTEEEEE
T ss_pred eEEEEECCCCeEEECCCCCCcc-cceEEE-EECCEEEEECCeeccCCCCceeccceeeeEEEEeCCCCEehhh
Confidence 6888776 68899976555332 112222 2356666653310 0124689999999999988
No 7
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=98.78 E-value=1.7e-06 Score=72.47 Aligned_cols=191 Identities=8% Similarity=0.038 Sum_probs=120.6
Q ss_pred ccEEEEcCcccccccCCCCCCCCCCCCCCCCcceEEEEeeCCCCCeEEEEEeeeeccccccCCCcCeEEEEEccCCc---
Q 039648 25 NRLTIWNPATREFRNLPNYKYCNSSNRLIPPSTFICLESDPINNDFKLLFVHNLWNEKRKRYGKVPNVQVYGFRTNS--- 101 (254)
Q Consensus 25 ~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~g~g~d~~~~~yKVv~~~~~~~~~~~~~~~~~~~~Vys~~~~~--- 101 (254)
.+++++||.|++|..+|..|.. + ..+. ...++ =+|+.+.... +......+++|+..++.
T Consensus 31 ~~~~~~d~~~~~W~~~~~~p~~--r-----~~~~-~~~~~-----~~l~v~GG~~-----~~~~~~~~~~~d~~~~~~~~ 92 (301)
T 2vpj_A 31 DVVEKYDPKTQEWSFLPSITRK--R-----RYVA-SVSLH-----DRIYVIGGYD-----GRSRLSSVECLDYTADEDGV 92 (301)
T ss_dssp CCEEEEETTTTEEEECCCCSSC--C-----BSCE-EEEET-----TEEEEECCBC-----SSCBCCCEEEEETTCCTTCC
T ss_pred eEEEEEcCCCCeEEeCCCCChh--h-----cccc-EEEEC-----CEEEEEcCCC-----CCccCceEEEEECCCCCCCe
Confidence 3579999999999999876542 1 1111 11222 1566554321 12234578999999999
Q ss_pred eeeccccC------ceEEEE-EEEEEEEecCC-CceEEEEEECCCcceeEe-cCCCCCCceeEEEEeCCeEEEEecC--C
Q 039648 102 WREVHGHQ------LDRYFK-VCYWLVIADTR-DLKVILSFHMDNEVFEEI-KIPPHVNYYSSISLYEDSLSIVIPD--A 170 (254)
Q Consensus 102 Wr~~~~~p------~~v~~~-~lyWl~~~~~~-~~~~IvsfD~~~e~~~~i-~~P~~~~~~~~l~~~~g~L~~~~~~--~ 170 (254)
|+.+..+| ..+.++ .+|-+...... ....+..||+.+.+|+.+ ++|... .....+..+|+|.++... .
T Consensus 93 W~~~~~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r-~~~~~~~~~~~iyv~GG~~~~ 171 (301)
T 2vpj_A 93 WYSVAPMNVRRGLAGATTLGDMIYVSGGFDGSRRHTSMERYDPNIDQWSMLGDMQTAR-EGAGLVVASGVIYCLGGYDGL 171 (301)
T ss_dssp CEEECCCSSCCBSCEEEEETTEEEEECCBCSSCBCCEEEEEETTTTEEEEEEECSSCC-BSCEEEEETTEEEEECCBCSS
T ss_pred eEECCCCCCCccceeEEEECCEEEEEcccCCCcccceEEEEcCCCCeEEECCCCCCCc-ccceEEEECCEEEEECCCCCC
Confidence 99997763 345667 88876533221 135799999999999988 344333 445667789999998842 1
Q ss_pred CCEEEEEEECC-CcceEEEEEecCCCcceeeEEEEeCCeEEEEeCcc--ccCCEEEEEECCCCcEEEEE
Q 039648 171 EQCFEIWVMND-NKCWAKHLTLGPFFNFRINFGFWKNDAFFIESNSR--IYGGCLFLHEHRTKEIKNLQ 236 (254)
Q Consensus 171 ~~~~~IW~l~~-~~~W~~~~~i~~~~~~~~~~~~~~~g~i~l~~~~~--~~~~~~~~yd~~t~~~~~~~ 236 (254)
...-++|+++- ...|+++-.++... . ..-.+.-++.|++.-... .....+..||+++++|+.+.
T Consensus 172 ~~~~~~~~~d~~~~~W~~~~~~p~~r-~-~~~~~~~~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~~ 238 (301)
T 2vpj_A 172 NILNSVEKYDPHTGHWTNVTPMATKR-S-GAGVALLNDHIYVVGGFDGTAHLSSVEAYNIRTDSWTTVT 238 (301)
T ss_dssp CBCCCEEEEETTTTEEEEECCCSSCC-B-SCEEEEETTEEEEECCBCSSSBCCCEEEEETTTTEEEEEC
T ss_pred cccceEEEEeCCCCcEEeCCCCCccc-c-cceEEEECCEEEEEeCCCCCcccceEEEEeCCCCcEEECC
Confidence 22345777775 68999985554322 1 112222366776664321 01246899999999999874
No 8
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=98.74 E-value=1.5e-06 Score=73.00 Aligned_cols=190 Identities=8% Similarity=0.018 Sum_probs=120.1
Q ss_pred ccEEEEcCcccccccCCCCCCCCCCCCCCCCcceEEEEeeCCCCCeEEEEEeeeeccccccCCCcCeEEEEEccCCceee
Q 039648 25 NRLTIWNPATREFRNLPNYKYCNSSNRLIPPSTFICLESDPINNDFKLLFVHNLWNEKRKRYGKVPNVQVYGFRTNSWRE 104 (254)
Q Consensus 25 ~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~g~g~d~~~~~yKVv~~~~~~~~~~~~~~~~~~~~Vys~~~~~Wr~ 104 (254)
.++.++||.|++|..+++.|..+ ..+... .++. +|+.+.... ......+++|+..+++|+.
T Consensus 24 ~~~~~~d~~~~~W~~~~~~p~~r-------~~~~~~-~~~~-----~lyv~GG~~------~~~~~~~~~~d~~~~~W~~ 84 (306)
T 3ii7_A 24 QSCRYFNPKDYSWTDIRCPFEKR-------RDAACV-FWDN-----VVYILGGSQ------LFPIKRMDCYNVVKDSWYS 84 (306)
T ss_dssp TSEEEEETTTTEEEECCCCSCCC-------BSCEEE-EETT-----EEEEECCBS------SSBCCEEEEEETTTTEEEE
T ss_pred ceEEEecCCCCCEecCCCCCccc-------ceeEEE-EECC-----EEEEEeCCC------CCCcceEEEEeCCCCeEEE
Confidence 35799999999999998766531 112222 2221 455554321 1234578999999999999
Q ss_pred ccccC------ceEEEE-EEEEEEEec-C-CCceEEEEEECCCcceeEe-cCCCCCCceeEEEEeCCeEEEEec--CCCC
Q 039648 105 VHGHQ------LDRYFK-VCYWLVIAD-T-RDLKVILSFHMDNEVFEEI-KIPPHVNYYSSISLYEDSLSIVIP--DAEQ 172 (254)
Q Consensus 105 ~~~~p------~~v~~~-~lyWl~~~~-~-~~~~~IvsfD~~~e~~~~i-~~P~~~~~~~~l~~~~g~L~~~~~--~~~~ 172 (254)
+..+| ..+.++ .+|-+.... . .....+..||+.+.+|+.+ ++|... .....+..+|+|.++.. ....
T Consensus 85 ~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r-~~~~~~~~~~~iyv~GG~~~~~~ 163 (306)
T 3ii7_A 85 KLGPPTPRDSLAACAAEGKIYTSGGSEVGNSALYLFECYDTRTESWHTKPSMLTQR-CSHGMVEANGLIYVCGGSLGNNV 163 (306)
T ss_dssp EECCSSCCBSCEEEEETTEEEEECCBBTTBSCCCCEEEEETTTTEEEEECCCSSCC-BSCEEEEETTEEEEECCEESCTT
T ss_pred CCCCCccccceeEEEECCEEEEECCCCCCCcEeeeEEEEeCCCCceEeCCCCcCCc-ceeEEEEECCEEEEECCCCCCCC
Confidence 87764 345667 888765432 1 1235789999999999998 344333 44566778999999883 1111
Q ss_pred ----EEEEEEECC-CcceEEEEEecCCCcceeeEEEEeCCeEEEEeCcc--ccCCEEEEEECCCCcEEEEE
Q 039648 173 ----CFEIWVMND-NKCWAKHLTLGPFFNFRINFGFWKNDAFFIESNSR--IYGGCLFLHEHRTKEIKNLQ 236 (254)
Q Consensus 173 ----~~~IW~l~~-~~~W~~~~~i~~~~~~~~~~~~~~~g~i~l~~~~~--~~~~~~~~yd~~t~~~~~~~ 236 (254)
.-++|+++- ...|+++-.++... ...-. +.-++.|++.-... .....+..||+++++|+.+.
T Consensus 164 ~~~~~~~~~~yd~~~~~W~~~~~~p~~r-~~~~~-~~~~~~i~v~GG~~~~~~~~~~~~yd~~~~~W~~~~ 232 (306)
T 3ii7_A 164 SGRVLNSCEVYDPATETWTELCPMIEAR-KNHGL-VFVKDKIFAVGGQNGLGGLDNVEYYDIKLNEWKMVS 232 (306)
T ss_dssp TCEECCCEEEEETTTTEEEEECCCSSCC-BSCEE-EEETTEEEEECCEETTEEBCCEEEEETTTTEEEECC
T ss_pred cccccceEEEeCCCCCeEEECCCccchh-hcceE-EEECCEEEEEeCCCCCCCCceEEEeeCCCCcEEECC
Confidence 445777765 68999886554322 11122 22366666653310 01246899999999999873
No 9
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=98.74 E-value=2.3e-06 Score=71.69 Aligned_cols=190 Identities=8% Similarity=0.050 Sum_probs=120.1
Q ss_pred cEEEEcCcccccccCCCCCCCCCCCCCCCCcceEEEEeeCCCCCeEEEEEeeeeccccccCCCcCeEEEEEccCCceeec
Q 039648 26 RLTIWNPATREFRNLPNYKYCNSSNRLIPPSTFICLESDPINNDFKLLFVHNLWNEKRKRYGKVPNVQVYGFRTNSWREV 105 (254)
Q Consensus 26 ~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~g~g~d~~~~~yKVv~~~~~~~~~~~~~~~~~~~~Vys~~~~~Wr~~ 105 (254)
.+.++||.+++|..+++.|..+ ..+.. ..++ =+|+.+..... ......+++|+..+++|+.+
T Consensus 31 ~~~~~d~~~~~W~~~~~~p~~r-------~~~~~-~~~~-----~~lyv~GG~~~-----~~~~~~~~~~d~~~~~W~~~ 92 (302)
T 2xn4_A 31 SVECYDFKEERWHQVAELPSRR-------CRAGM-VYMA-----GLVFAVGGFNG-----SLRVRTVDSYDPVKDQWTSV 92 (302)
T ss_dssp CEEEEETTTTEEEEECCCSSCC-------BSCEE-EEET-----TEEEEESCBCS-----SSBCCCEEEEETTTTEEEEE
T ss_pred cEEEEcCcCCcEeEcccCCccc-------ccceE-EEEC-----CEEEEEeCcCC-----CccccceEEECCCCCceeeC
Confidence 4699999999999998765431 11111 1121 24555543211 12345789999999999999
Q ss_pred cccC------ceEEEE-EEEEEEEecCC-CceEEEEEECCCcceeEec-CCCCCCceeEEEEeCCeEEEEecC--CC--C
Q 039648 106 HGHQ------LDRYFK-VCYWLVIADTR-DLKVILSFHMDNEVFEEIK-IPPHVNYYSSISLYEDSLSIVIPD--AE--Q 172 (254)
Q Consensus 106 ~~~p------~~v~~~-~lyWl~~~~~~-~~~~IvsfD~~~e~~~~i~-~P~~~~~~~~l~~~~g~L~~~~~~--~~--~ 172 (254)
..+| ..+.++ .+|-+...... ....+..||+.+++|+.++ +|... .....+..+|+|.++... .. .
T Consensus 93 ~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r-~~~~~~~~~~~iyv~GG~~~~~~~~ 171 (302)
T 2xn4_A 93 ANMRDRRSTLGAAVLNGLLYAVGGFDGSTGLSSVEAYNIKSNEWFHVAPMNTRR-SSVGVGVVGGLLYAVGGYDVASRQC 171 (302)
T ss_dssp CCCSSCCBSCEEEEETTEEEEEEEECSSCEEEEEEEEETTTTEEEEECCCSSCC-BSCEEEEETTEEEEECCEETTTTEE
T ss_pred CCCCccccceEEEEECCEEEEEcCCCCCccCceEEEEeCCCCeEeecCCCCCcc-cCceEEEECCEEEEEeCCCCCCCcc
Confidence 8774 345667 88877654322 1257899999999999984 34332 445667789999999841 11 1
Q ss_pred EEEEEEECC-CcceEEEEEecCCCcceeeEEEEeCCeEEEEeCcc--ccCCEEEEEECCCCcEEEEE
Q 039648 173 CFEIWVMND-NKCWAKHLTLGPFFNFRINFGFWKNDAFFIESNSR--IYGGCLFLHEHRTKEIKNLQ 236 (254)
Q Consensus 173 ~~~IW~l~~-~~~W~~~~~i~~~~~~~~~~~~~~~g~i~l~~~~~--~~~~~~~~yd~~t~~~~~~~ 236 (254)
.-++|+++- ...|+++-.++... ..... +.-++.|++.-... .....+..||+++++|+.+.
T Consensus 172 ~~~~~~yd~~~~~W~~~~~~p~~r-~~~~~-~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~ 236 (302)
T 2xn4_A 172 LSTVECYNATTNEWTYIAEMSTRR-SGAGV-GVLNNLLYAVGGHDGPLVRKSVEVYDPTTNAWRQVA 236 (302)
T ss_dssp CCCEEEEETTTTEEEEECCCSSCC-BSCEE-EEETTEEEEECCBSSSSBCCCEEEEETTTTEEEEEC
T ss_pred ccEEEEEeCCCCcEEECCCCcccc-ccccE-EEECCEEEEECCCCCCcccceEEEEeCCCCCEeeCC
Confidence 235777775 68999986554322 11222 22366776664311 01246999999999999874
No 10
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=98.71 E-value=2e-06 Score=72.56 Aligned_cols=196 Identities=9% Similarity=0.044 Sum_probs=116.5
Q ss_pred cEEEEcCcccccccCCCCCCCCCCCCCCCCcceEEEEeeCCCCCeEEEEEeeeeccc-cccCCCcCeEEEEEccCCceee
Q 039648 26 RLTIWNPATREFRNLPNYKYCNSSNRLIPPSTFICLESDPINNDFKLLFVHNLWNEK-RKRYGKVPNVQVYGFRTNSWRE 104 (254)
Q Consensus 26 ~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~g~g~d~~~~~yKVv~~~~~~~~~-~~~~~~~~~~~Vys~~~~~Wr~ 104 (254)
.+.++||.|++|.. ++.+...++ ...+... . + =+|+.+....... .........+++|+..+++|+.
T Consensus 14 ~~~~yd~~~~~W~~-~~~~~p~~r-------~~~~~~~--~-~-~~iyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~ 81 (315)
T 4asc_A 14 GAVAYDPAANECYC-ASLSSQVPK-------NHVSLVT--K-E-NQVFVAGGLFYNEDNKEDPMSAYFLQFDHLDSEWLG 81 (315)
T ss_dssp EEEEEETTTTEEEE-EECCCCSCS-------SEEEEEC--T-T-CCEEEEEEEEECSSCSSSCEEEEEEEEETTTTEEEE
T ss_pred ceEEECCCCCeEec-CCCCCCCCc-------cceEEEE--E-C-CEEEEEcCcccCCCCCccccccceEEecCCCCeEEE
Confidence 46999999999986 333221121 1122221 1 1 1344444321110 0001122348899999999999
Q ss_pred ccccC------ceEEEE-EEEEEEEec----CCCceEEEEEECCCcceeEe-cCCCCCCceeEEEEeCCeEEEEecC---
Q 039648 105 VHGHQ------LDRYFK-VCYWLVIAD----TRDLKVILSFHMDNEVFEEI-KIPPHVNYYSSISLYEDSLSIVIPD--- 169 (254)
Q Consensus 105 ~~~~p------~~v~~~-~lyWl~~~~----~~~~~~IvsfD~~~e~~~~i-~~P~~~~~~~~l~~~~g~L~~~~~~--- 169 (254)
+..+| ..+.++ .+|-+.... ......+..||+.+.+|+.+ ++|... .....+..+++|.++...
T Consensus 82 ~~~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r-~~~~~~~~~~~iyv~GG~~~~ 160 (315)
T 4asc_A 82 MPPLPSPRCLFGLGEALNSIYVVGGREIKDGERCLDSVMCYDRLSFKWGESDPLPYVV-YGHTVLSHMDLVYVIGGKGSD 160 (315)
T ss_dssp CCCBSSCEESCEEEEETTEEEEECCEESSTTCCBCCCEEEEETTTTEEEECCCCSSCC-BSCEEEEETTEEEEECCBCTT
T ss_pred CCCCCcchhceeEEEECCEEEEEeCCcCCCCCcccceEEEECCCCCcEeECCCCCCcc-cceeEEEECCEEEEEeCCCCC
Confidence 87774 345667 888775432 11235789999999999988 444433 445667799999999842
Q ss_pred CCCEEEEEEECC-CcceEEEEEecCCCcceeeEEEEeCCeEEEEeCcc--ccCCEEEEEECCCCcEEEEE
Q 039648 170 AEQCFEIWVMND-NKCWAKHLTLGPFFNFRINFGFWKNDAFFIESNSR--IYGGCLFLHEHRTKEIKNLQ 236 (254)
Q Consensus 170 ~~~~~~IW~l~~-~~~W~~~~~i~~~~~~~~~~~~~~~g~i~l~~~~~--~~~~~~~~yd~~t~~~~~~~ 236 (254)
....-++|+++- ..+|+++-.++... ...-. +.-++.|++.-... .....+..||+++++|+.+.
T Consensus 161 ~~~~~~~~~yd~~~~~W~~~~~~p~~r-~~~~~-~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~ 228 (315)
T 4asc_A 161 RKCLNKMCVYDPKKFEWKELAPMQTAR-SLFGA-TVHDGRIIVAAGVTDTGLTSSAEVYSITDNKWAPFE 228 (315)
T ss_dssp SCBCCCEEEEETTTTEEEECCCCSSCC-BSCEE-EEETTEEEEEEEECSSSEEEEEEEEETTTTEEEEEC
T ss_pred CcccceEEEEeCCCCeEEECCCCCCch-hceEE-EEECCEEEEEeccCCCCccceEEEEECCCCeEEECC
Confidence 122346777776 68899876554322 11112 22366666654310 00236899999999999884
No 11
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=98.70 E-value=9.8e-07 Score=74.38 Aligned_cols=194 Identities=9% Similarity=0.013 Sum_probs=119.3
Q ss_pred cEEEEcCcccccccCCCCCCCCCCCCCCCCcceEEEEeeCCCCCeEEEEEeeeeccccccCCCcCeEEEEEccCCceeec
Q 039648 26 RLTIWNPATREFRNLPNYKYCNSSNRLIPPSTFICLESDPINNDFKLLFVHNLWNEKRKRYGKVPNVQVYGFRTNSWREV 105 (254)
Q Consensus 26 ~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~g~g~d~~~~~yKVv~~~~~~~~~~~~~~~~~~~~Vys~~~~~Wr~~ 105 (254)
.+.++||.|++|..+++.|..+ ...... .++ =+|+.+...... .........+++|+..++.|+.+
T Consensus 40 ~~~~~d~~~~~W~~~~~~p~~r-------~~~~~~-~~~-----~~lyv~GG~~~~-~~~~~~~~~~~~~d~~~~~W~~~ 105 (308)
T 1zgk_A 40 YLEAYNPSNGTWLRLADLQVPR-------SGLAGC-VVG-----GLLYAVGGRNNS-PDGNTDSSALDCYNPMTNQWSPC 105 (308)
T ss_dssp CEEEEETTTTEEEECCCCSSCC-------BSCEEE-EET-----TEEEEECCEEEE-TTEEEECCCEEEEETTTTEEEEC
T ss_pred eEEEEcCCCCeEeECCCCCccc-------ccceEE-EEC-----CEEEEECCCcCC-CCCCeecceEEEECCCCCeEeEC
Confidence 4799999999999998765531 111111 111 245555432100 00012235789999999999999
Q ss_pred cccC------ceEEEE-EEEEEEEecCC-CceEEEEEECCCcceeEe-cCCCCCCceeEEEEeCCeEEEEecC--CCCEE
Q 039648 106 HGHQ------LDRYFK-VCYWLVIADTR-DLKVILSFHMDNEVFEEI-KIPPHVNYYSSISLYEDSLSIVIPD--AEQCF 174 (254)
Q Consensus 106 ~~~p------~~v~~~-~lyWl~~~~~~-~~~~IvsfD~~~e~~~~i-~~P~~~~~~~~l~~~~g~L~~~~~~--~~~~~ 174 (254)
..+| ..+.++ .+|-+...... ....+..||+.+++|+.+ ++|... .....+..+++|.++... ....-
T Consensus 106 ~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r-~~~~~~~~~~~iyv~GG~~~~~~~~ 184 (308)
T 1zgk_A 106 APMSVPRNRIGVGVIDGHIYAVGGSHGCIHHNSVERYEPERDEWHLVAPMLTRR-IGVGVAVLNRLLYAVGGFDGTNRLN 184 (308)
T ss_dssp CCCSSCCBTCEEEEETTEEEEECCEETTEECCCEEEEETTTTEEEECCCCSSCC-BSCEEEEETTEEEEECCBCSSCBCC
T ss_pred CCCCcCccccEEEEECCEEEEEcCCCCCcccccEEEECCCCCeEeECCCCCccc-cceEEEEECCEEEEEeCCCCCCcCc
Confidence 8763 345667 88877432211 124689999999999988 444433 345567779999999842 12234
Q ss_pred EEEEECC-CcceEEEEEecCCCcceeeEEEEeCCeEEEEeCcc--ccCCEEEEEECCCCcEEEEE
Q 039648 175 EIWVMND-NKCWAKHLTLGPFFNFRINFGFWKNDAFFIESNSR--IYGGCLFLHEHRTKEIKNLQ 236 (254)
Q Consensus 175 ~IW~l~~-~~~W~~~~~i~~~~~~~~~~~~~~~g~i~l~~~~~--~~~~~~~~yd~~t~~~~~~~ 236 (254)
++|+++- ...|+++-.++... ...-.. .-++.|++.-... .....+..||+++++|+.+.
T Consensus 185 ~~~~yd~~~~~W~~~~~~p~~r-~~~~~~-~~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~ 247 (308)
T 1zgk_A 185 SAECYYPERNEWRMITAMNTIR-SGAGVC-VLHNCIYAAGGYDGQDQLNSVERYDVETETWTFVA 247 (308)
T ss_dssp CEEEEETTTTEEEECCCCSSCC-BSCEEE-EETTEEEEECCBCSSSBCCCEEEEETTTTEEEECC
T ss_pred eEEEEeCCCCeEeeCCCCCCcc-ccceEE-EECCEEEEEeCCCCCCccceEEEEeCCCCcEEECC
Confidence 5677665 68999876554322 111222 2366777664311 01256999999999999774
No 12
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=98.68 E-value=2e-06 Score=73.86 Aligned_cols=216 Identities=12% Similarity=0.080 Sum_probs=122.6
Q ss_pred EeccCceEEEEEc-CCccEEEEcCcc--cccccCCCCCCCCCCCCCCCCcceEEEEeeCCCCCeEEEEEeeeeccccccC
Q 039648 10 VGYHDGLFCIMQS-STNRLTIWNPAT--REFRNLPNYKYCNSSNRLIPPSTFICLESDPINNDFKLLFVHNLWNEKRKRY 86 (254)
Q Consensus 10 ~~scnGLlcl~~~-~~~~~~V~NP~T--~~~~~LP~~~~~~~~~~~~~~~~~~g~g~d~~~~~yKVv~~~~~~~~~~~~~ 86 (254)
....+|-|.+... .+.+++++||.+ ++|..+|+.|.. ++ ..+. ...++. ||+.+...........
T Consensus 15 ~~~~~~~iyv~GG~~~~~~~~~d~~~~~~~W~~~~~~p~~-~R-----~~~~-~~~~~~-----~lyv~GG~~~~~~~~~ 82 (357)
T 2uvk_A 15 GAIDNDTVYIGLGSAGTAWYKLDTQAKDKKWTALAAFPGG-PR-----DQAT-SAFIDG-----NLYVFGGIGKNSEGLT 82 (357)
T ss_dssp EEEETTEEEEECGGGTTCEEEEETTSSSCCEEECCCCTTC-CC-----BSCE-EEEETT-----EEEEECCEEECTTSCE
T ss_pred EEEECCEEEEEeCcCCCeEEEEccccCCCCeeECCCCCCC-cC-----ccce-EEEECC-----EEEEEcCCCCCCCccc
Confidence 3344776655442 234579999984 999999886621 11 1111 122221 5666644211000001
Q ss_pred CCcCeEEEEEccCCceeecccc-C------ceEEEE-EEEEEEEecCC--------------------------------
Q 039648 87 GKVPNVQVYGFRTNSWREVHGH-Q------LDRYFK-VCYWLVIADTR-------------------------------- 126 (254)
Q Consensus 87 ~~~~~~~Vys~~~~~Wr~~~~~-p------~~v~~~-~lyWl~~~~~~-------------------------------- 126 (254)
.....+++|+..+++|+.+..+ | ..+..+ .+|-+......
T Consensus 83 ~~~~~v~~yd~~~~~W~~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (357)
T 2uvk_A 83 QVFNDVHKYNPKTNSWVKLMSHAPMGMAGHVTFVHNGKAYVTGGVNQNIFNGYFEDLNEAGKDSTAIDKINAHYFDKKAE 162 (357)
T ss_dssp EECCCEEEEETTTTEEEECSCCCSSCCSSEEEEEETTEEEEEECCCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHSSCGG
T ss_pred eeeccEEEEeCCCCcEEECCCCCCcccccceEEEECCEEEEEeCcCCCcCcccccchhhcCCcccchhhhhhhhcccccc
Confidence 2345789999999999998765 2 235566 88877532210
Q ss_pred ---CceEEEEEECCCcceeEe-cCCCCCCceeEEEEeCCeEEEEecC---CCCEEEEEEEC---CCcceEEEEEecCCCc
Q 039648 127 ---DLKVILSFHMDNEVFEEI-KIPPHVNYYSSISLYEDSLSIVIPD---AEQCFEIWVMN---DNKCWAKHLTLGPFFN 196 (254)
Q Consensus 127 ---~~~~IvsfD~~~e~~~~i-~~P~~~~~~~~l~~~~g~L~~~~~~---~~~~~~IW~l~---~~~~W~~~~~i~~~~~ 196 (254)
....+..||+++.+|+.+ ++|........++..+++|.++... ....-++|.++ +...|+++..++....
T Consensus 163 ~~~~~~~v~~yd~~~~~W~~~~~~p~~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~v~~~d~d~~~~~W~~~~~~~~~~~ 242 (357)
T 2uvk_A 163 DYFFNKFLLSFDPSTQQWSYAGESPWYGTAGAAVVNKGDKTWLINGEAKPGLRTDAVFELDFTGNNLKWNKLAPVSSPDG 242 (357)
T ss_dssp GGCCCCEEEEEETTTTEEEEEEECSSCCCBSCEEEEETTEEEEECCEEETTEECCCEEEEECC---CEEEECCCSSTTTC
T ss_pred ccCCcccEEEEeCCCCcEEECCCCCCCCcccccEEEECCEEEEEeeecCCCcccCceEEEEecCCCCcEEecCCCCCCcc
Confidence 124799999999999988 4453321236678889999998841 11234567664 2678998766542221
Q ss_pred ceeeEEEEeCCeEEEEeCcccc-------------------CCEEEEEECCCCcEEEEEE
Q 039648 197 FRINFGFWKNDAFFIESNSRIY-------------------GGCLFLHEHRTKEIKNLQV 237 (254)
Q Consensus 197 ~~~~~~~~~~g~i~l~~~~~~~-------------------~~~~~~yd~~t~~~~~~~~ 237 (254)
......+..++.|++.-..... -..+..||+++++|+.+.-
T Consensus 243 ~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~g~~~~~~~~~~~~~~~~yd~~~~~W~~~~~ 302 (357)
T 2uvk_A 243 VAGGFAGISNDSLIFAGGAGFKGSRENYQNGKNYAHEGLKKSYSTDIHLWHNGKWDKSGE 302 (357)
T ss_dssp CBSCEEEEETTEEEEECCEECTTHHHHHHTTCSSTTTTCCCEECCEEEECC---CEEEEE
T ss_pred cccceEEEECCEEEEEcCccccCCcccccccceeccccccceeeEEEEecCCCceeeCCC
Confidence 1122223346677665431000 0247899999999998843
No 13
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=98.51 E-value=2e-05 Score=66.46 Aligned_cols=206 Identities=9% Similarity=0.081 Sum_probs=119.6
Q ss_pred CceEEEEEcCCccEEEEcCcccccccCCCCCCCCCCCCCCCCcceEEEEeeCCCCCeEEEEEeeeeccccc-cCCCcCeE
Q 039648 14 DGLFCIMQSSTNRLTIWNPATREFRNLPNYKYCNSSNRLIPPSTFICLESDPINNDFKLLFVHNLWNEKRK-RYGKVPNV 92 (254)
Q Consensus 14 nGLlcl~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~g~g~d~~~~~yKVv~~~~~~~~~~~-~~~~~~~~ 92 (254)
++.+.+.... ...++||.|++|...|.+ ...++ ...+... . +=+|+.+.....+... .......+
T Consensus 15 ~~~i~~~GG~--~~~~yd~~~~~W~~~~~~-~~~~r-------~~~~~~~--~--~~~lyv~GG~~~~~~~~~~~~~~~~ 80 (318)
T 2woz_A 15 KDLILLVNDT--AAVAYDPMENECYLTALA-EQIPR-------NHSSIVT--Q--QNQVYVVGGLYVDEENKDQPLQSYF 80 (318)
T ss_dssp EEEEEEECSS--EEEEEETTTTEEEEEEEC-TTSCS-------SEEEEEC--S--SSCEEEEESSCC-------CCCBEE
T ss_pred cchhhhcccc--ceEEECCCCCceecccCC-ccCCc-------cceEEEE--E--CCEEEEECCcccCccccCCCccccE
Confidence 4555544443 358999999999984422 21121 1122221 1 1234444331000000 01122348
Q ss_pred EEEEccCCceeeccccC------ceEEEE-EEEEEEEecC---CCceEEEEEECCCcceeEe-cCCCCCCceeEEEEeCC
Q 039648 93 QVYGFRTNSWREVHGHQ------LDRYFK-VCYWLVIADT---RDLKVILSFHMDNEVFEEI-KIPPHVNYYSSISLYED 161 (254)
Q Consensus 93 ~Vys~~~~~Wr~~~~~p------~~v~~~-~lyWl~~~~~---~~~~~IvsfD~~~e~~~~i-~~P~~~~~~~~l~~~~g 161 (254)
++|+..+++|+.+..+| ..+.++ .+|-+..... .....+..||+.+.+|+.+ ++|... .....+..+|
T Consensus 81 ~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r-~~~~~~~~~~ 159 (318)
T 2woz_A 81 FQLDNVSSEWVGLPPLPSARCLFGLGEVDDKIYVVAGKDLQTEASLDSVLCYDPVAAKWSEVKNLPIKV-YGHNVISHNG 159 (318)
T ss_dssp EEEETTTTEEEECSCBSSCBCSCEEEEETTEEEEEEEEBTTTCCEEEEEEEEETTTTEEEEECCCSSCE-ESCEEEEETT
T ss_pred EEEeCCCCcEEECCCCCccccccceEEECCEEEEEcCccCCCCcccceEEEEeCCCCCEeECCCCCCcc-cccEEEEECC
Confidence 89999999999987764 345567 8888765431 1135799999999999998 444433 3445667899
Q ss_pred eEEEEecC---CCCEEEEEEECC-CcceEEEEEecCCCcceeeEEEEeCCeEEEEeCccc--cCCEEEEEECCCCcEEEE
Q 039648 162 SLSIVIPD---AEQCFEIWVMND-NKCWAKHLTLGPFFNFRINFGFWKNDAFFIESNSRI--YGGCLFLHEHRTKEIKNL 235 (254)
Q Consensus 162 ~L~~~~~~---~~~~~~IW~l~~-~~~W~~~~~i~~~~~~~~~~~~~~~g~i~l~~~~~~--~~~~~~~yd~~t~~~~~~ 235 (254)
+|.++... ....-++|+++- ..+|+++-.++... ...... ..++.|++.-.... ....+..||+++++|+.+
T Consensus 160 ~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r-~~~~~~-~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~ 237 (318)
T 2woz_A 160 MIYCLGGKTDDKKCTNRVFIYNPKKGDWKDLAPMKTPR-SMFGVA-IHKGKIVIAGGVTEDGLSASVEAFDLKTNKWEVM 237 (318)
T ss_dssp EEEEECCEESSSCBCCCEEEEETTTTEEEEECCCSSCC-BSCEEE-EETTEEEEEEEEETTEEEEEEEEEETTTCCEEEC
T ss_pred EEEEEcCCCCCCCccceEEEEcCCCCEEEECCCCCCCc-ccceEE-EECCEEEEEcCcCCCCccceEEEEECCCCeEEEC
Confidence 99998841 122345777776 68899986554322 111222 23566666543100 024578999999999987
Q ss_pred E
Q 039648 236 Q 236 (254)
Q Consensus 236 ~ 236 (254)
.
T Consensus 238 ~ 238 (318)
T 2woz_A 238 T 238 (318)
T ss_dssp C
T ss_pred C
Confidence 4
No 14
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=98.32 E-value=1.2e-05 Score=75.54 Aligned_cols=198 Identities=8% Similarity=0.060 Sum_probs=114.7
Q ss_pred cEEEEcCcccccccCC-CCCCC-CCCCCCCCCcceEEEEeeCCCCCeEEEEEeeeeccccccCCCcCeEEEEEccCCcee
Q 039648 26 RLTIWNPATREFRNLP-NYKYC-NSSNRLIPPSTFICLESDPINNDFKLLFVHNLWNEKRKRYGKVPNVQVYGFRTNSWR 103 (254)
Q Consensus 26 ~~~V~NP~T~~~~~LP-~~~~~-~~~~~~~~~~~~~g~g~d~~~~~yKVv~~~~~~~~~~~~~~~~~~~~Vys~~~~~Wr 103 (254)
++.++||.|++|..++ +.+.. .|.. ...+. ...+ .. + =+|+.+...... ......+++|+..++.|+
T Consensus 413 ~v~~yd~~~~~W~~~~~~~p~~~~p~~---R~~hs-~~~~-~~-~-~~lyv~GG~~~~----~~~~~dv~~yd~~t~~W~ 481 (695)
T 2zwa_A 413 EILQLSIHYDKIDMKNIEVSSSEVPVA---RMCHT-FTTI-SR-N-NQLLLIGGRKAP----HQGLSDNWIFDMKTREWS 481 (695)
T ss_dssp CEEEEEECSSCEEEEECCCCCSCCCCC---CBSCE-EEEE-TT-T-TEEEEECCBSST----TCBCCCCEEEETTTTEEE
T ss_pred cEEEEECCCCeEEEeccCCCCCCCCcc---ccceE-EEEE-cc-C-CEEEEEcCCCCC----CCccccEEEEeCCCCcEE
Confidence 4799999999999998 52211 1110 11111 1122 10 1 246665432110 112346899999999999
Q ss_pred eccccC------ceEEE-E-EEEEEEEecCCCceEEEEEECCCcceeEec----CCCCCCceeEEEEeC---CeEEEEec
Q 039648 104 EVHGHQ------LDRYF-K-VCYWLVIADTRDLKVILSFHMDNEVFEEIK----IPPHVNYYSSISLYE---DSLSIVIP 168 (254)
Q Consensus 104 ~~~~~p------~~v~~-~-~lyWl~~~~~~~~~~IvsfD~~~e~~~~i~----~P~~~~~~~~l~~~~---g~L~~~~~ 168 (254)
.+..+| ..+.+ + .+|-+...... . .+..||+++++|+.++ +|... .....+.++ |+|.++++
T Consensus 482 ~~~~~p~~R~~h~~~~~~~~~iyv~GG~~~~-~-~v~~yd~~t~~W~~~~~~g~~p~~r-~~~~a~v~~~~~~~iyv~GG 558 (695)
T 2zwa_A 482 MIKSLSHTRFRHSACSLPDGNVLILGGVTEG-P-AMLLYNVTEEIFKDVTPKDEFFQNS-LVSAGLEFDPVSKQGIILGG 558 (695)
T ss_dssp ECCCCSBCCBSCEEEECTTSCEEEECCBCSS-C-SEEEEETTTTEEEECCCSSGGGGSC-CBSCEEEEETTTTEEEEECC
T ss_pred ECCCCCCCcccceEEEEcCCEEEEECCCCCC-C-CEEEEECCCCceEEccCCCCCCCcc-cceeEEEEeCCCCEEEEECC
Confidence 998774 34444 6 78766433221 1 6999999999999986 34333 222323334 88999984
Q ss_pred C--C--CCEEEEEEECC-Ccc------eEEEEEecCCCcceeeEEEEeCCeEEEEeCcc-----ccCCEEEEEECCCCcE
Q 039648 169 D--A--EQCFEIWVMND-NKC------WAKHLTLGPFFNFRINFGFWKNDAFFIESNSR-----IYGGCLFLHEHRTKEI 232 (254)
Q Consensus 169 ~--~--~~~~~IW~l~~-~~~------W~~~~~i~~~~~~~~~~~~~~~g~i~l~~~~~-----~~~~~~~~yd~~t~~~ 232 (254)
. . ...-++|+++- ... |+++..+++......-..+.+++.|++.-+.. .....+..||+++++|
T Consensus 559 ~~~~~~~~~~~v~~yd~~~~~w~~~~~W~~~~~~p~~~R~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~v~~yd~~t~~W 638 (695)
T 2zwa_A 559 GFMDQTTVSDKAIIFKYDAENATEPITVIKKLQHPLFQRYGSQIKYITPRKLLIVGGTSPSGLFDRTNSIISLDPLSETL 638 (695)
T ss_dssp BCTTSSCBCCEEEEEEECTTCSSCCEEEEEEEECGGGCCBSCEEEEEETTEEEEECCBCSSCCCCTTTSEEEEETTTTEE
T ss_pred cCCCCCeeeCcEEEEEccCCccccceEEEEcCCCCCCCcccceEEEeCCCEEEEECCccCCCCCCCCCeEEEEECCCCeE
Confidence 2 1 12234555553 344 88887754332223334445547777664311 0135699999999999
Q ss_pred EEEEE
Q 039648 233 KNLQV 237 (254)
Q Consensus 233 ~~~~~ 237 (254)
+.+.+
T Consensus 639 ~~~~~ 643 (695)
T 2zwa_A 639 TSIPI 643 (695)
T ss_dssp EECCC
T ss_pred EEeec
Confidence 96654
No 15
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=98.19 E-value=0.00069 Score=57.76 Aligned_cols=145 Identities=9% Similarity=0.030 Sum_probs=86.1
Q ss_pred cCeEEEEEccCCceeeccccC-------ceEEEE-EEEEEEEecCC--CceEEEEEEC--CCcceeEec-CCCCCC-cee
Q 039648 89 VPNVQVYGFRTNSWREVHGHQ-------LDRYFK-VCYWLVIADTR--DLKVILSFHM--DNEVFEEIK-IPPHVN-YYS 154 (254)
Q Consensus 89 ~~~~~Vys~~~~~Wr~~~~~p-------~~v~~~-~lyWl~~~~~~--~~~~IvsfD~--~~e~~~~i~-~P~~~~-~~~ 154 (254)
...+++|+..++.|+.+..+| ..+.++ .+|-+...... ....+..||+ ++.+|+.++ +|.... ...
T Consensus 167 ~~~v~~yd~~~~~W~~~~~~p~~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~v~~~d~d~~~~~W~~~~~~~~~~~~~~~ 246 (357)
T 2uvk_A 167 NKFLLSFDPSTQQWSYAGESPWYGTAGAAVVNKGDKTWLINGEAKPGLRTDAVFELDFTGNNLKWNKLAPVSSPDGVAGG 246 (357)
T ss_dssp CCEEEEEETTTTEEEEEEECSSCCCBSCEEEEETTEEEEECCEEETTEECCCEEEEECC---CEEEECCCSSTTTCCBSC
T ss_pred cccEEEEeCCCCcEEECCCCCCCCcccccEEEECCEEEEEeeecCCCcccCceEEEEecCCCCcEEecCCCCCCcccccc
Confidence 358999999999999987663 234556 88877432111 1235777887 888999873 333221 334
Q ss_pred EEEEeCCeEEEEecCC-------------------CCEEEEEEECC-CcceEEEEEecCCCcceeeEEEEeCCeEEEEeC
Q 039648 155 SISLYEDSLSIVIPDA-------------------EQCFEIWVMND-NKCWAKHLTLGPFFNFRINFGFWKNDAFFIESN 214 (254)
Q Consensus 155 ~l~~~~g~L~~~~~~~-------------------~~~~~IW~l~~-~~~W~~~~~i~~~~~~~~~~~~~~~g~i~l~~~ 214 (254)
..+..+++|.++.... ....++|+++- ..+|+++-.++..... ...+.-++.|++.-.
T Consensus 247 ~~~~~~~~iyv~GG~~~~~~~~~~~~g~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~--~~~~~~~~~i~v~GG 324 (357)
T 2uvk_A 247 FAGISNDSLIFAGGAGFKGSRENYQNGKNYAHEGLKKSYSTDIHLWHNGKWDKSGELSQGRAY--GVSLPWNNSLLIIGG 324 (357)
T ss_dssp EEEEETTEEEEECCEECTTHHHHHHTTCSSTTTTCCCEECCEEEECC---CEEEEECSSCCBS--SEEEEETTEEEEEEE
T ss_pred eEEEECCEEEEEcCccccCCcccccccceeccccccceeeEEEEecCCCceeeCCCCCCCccc--ceeEEeCCEEEEEee
Confidence 5788899999988411 11245677665 6899998776643311 122334667666543
Q ss_pred cccc---CCEEEEEECCCCcEEEE
Q 039648 215 SRIY---GGCLFLHEHRTKEIKNL 235 (254)
Q Consensus 215 ~~~~---~~~~~~yd~~t~~~~~~ 235 (254)
.... -..+..++++++++...
T Consensus 325 ~~~~~~~~~~v~~l~~~~~~~~~~ 348 (357)
T 2uvk_A 325 ETAGGKAVTDSVLITVKDNKVTVQ 348 (357)
T ss_dssp ECGGGCEEEEEEEEEC-CCSCEEE
T ss_pred eCCCCCEeeeEEEEEEcCcEeEee
Confidence 1100 13577899999988765
No 16
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=97.56 E-value=0.0046 Score=57.45 Aligned_cols=191 Identities=7% Similarity=-0.060 Sum_probs=105.2
Q ss_pred cEEEEcCcccccccCCCCCCCCCCCCCCCCcceEEEEeeCCCCCeEEEEEeeeeccccccCCCcCeEEEEEccCCceeec
Q 039648 26 RLTIWNPATREFRNLPNYKYCNSSNRLIPPSTFICLESDPINNDFKLLFVHNLWNEKRKRYGKVPNVQVYGFRTNSWREV 105 (254)
Q Consensus 26 ~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~g~g~d~~~~~yKVv~~~~~~~~~~~~~~~~~~~~Vys~~~~~Wr~~ 105 (254)
.+.++||.|++|..++..+.... ....+..+.. +=||+.+... ....+++|+..++.|+.+
T Consensus 220 ~~~~yd~~t~~w~~~~~~~~~~~-------~~~~~~~~~~---~g~lyv~GG~---------~~~~v~~yd~~t~~W~~~ 280 (656)
T 1k3i_A 220 LTSSWDPSTGIVSDRTVTVTKHD-------MFCPGISMDG---NGQIVVTGGN---------DAKKTSLYDSSSDSWIPG 280 (656)
T ss_dssp EEEEECTTTCCBCCCEEEECSCC-------CSSCEEEECT---TSCEEEECSS---------STTCEEEEEGGGTEEEEC
T ss_pred EEEEEeCCCCcEEeCcccCCCCC-------CccccccCCC---CCCEEEeCCC---------CCCceEEecCcCCceeEC
Confidence 47899999999999986544211 1111222111 1134444321 112678888888888887
Q ss_pred cccC------ceEEE-E-EEEEEEEecC--CCceEEEEEECCCcceeEec------CCCCCC-------c----------
Q 039648 106 HGHQ------LDRYF-K-VCYWLVIADT--RDLKVILSFHMDNEVFEEIK------IPPHVN-------Y---------- 152 (254)
Q Consensus 106 ~~~p------~~v~~-~-~lyWl~~~~~--~~~~~IvsfD~~~e~~~~i~------~P~~~~-------~---------- 152 (254)
..+| ..+.+ + .+|-+..... .....+..||+++++|+.++ +|.... .
T Consensus 281 ~~~~~~R~~~s~~~~~dg~iyv~GG~~~~~~~~~~~e~yd~~t~~W~~~~~~~~~p~~~~~~~~~~~~~~~iyv~Gg~~g 360 (656)
T 1k3i_A 281 PDMQVARGYQSSATMSDGRVFTIGGSWSGGVFEKNGEVYSPSSKTWTSLPNAKVNPMLTADKQGLYRSDNHAWLFGWKKG 360 (656)
T ss_dssp CCCSSCCSSCEEEECTTSCEEEECCCCCSSSCCCCEEEEETTTTEEEEETTSCSGGGCCCCTTGGGTTTCSCCEEECGGG
T ss_pred CCCCccccccceEEecCCeEEEEeCcccCCcccccceEeCCCCCcceeCCCccccccccccccceeecCCceEEEECCCC
Confidence 7663 23455 6 7776543111 11245777888888888762 222100 0
Q ss_pred --------------------------------------eeEEEE----eCCeEEEEecCC--------CCEEEEEEECC-
Q 039648 153 --------------------------------------YSSISL----YEDSLSIVIPDA--------EQCFEIWVMND- 181 (254)
Q Consensus 153 --------------------------------------~~~l~~----~~g~L~~~~~~~--------~~~~~IW~l~~- 181 (254)
...-+. .+|+|.++.... .....|++.+.
T Consensus 361 ~~~~~~~~~~v~~yd~~~~~w~~~~~~~~~~~~~~~~~~~~~av~~~~~~~~i~v~GG~~~~~~~~~~~~~~~v~~yd~~ 440 (656)
T 1k3i_A 361 SVFQAGPSTAMNWYYTSGSGDVKSAGKRQSNRGVAPDAMCGNAVMYDAVKGKILTFGGSPDYQDSDATTNAHIITLGEPG 440 (656)
T ss_dssp CEEECCSSSEEEEEECSTTCEEEEEEECEETTEECCCCBTCEEEEEETTTTEEEEECCBSSSSSSBCCCCEEEEECCSTT
T ss_pred cEEEecCccceeeeecCCcceeecCCccccccccCCCCCCCceEeccCCCCeEEEEeCCCCCCCCCcCCcceEEEcCCCC
Confidence 001112 378888877311 12225666654
Q ss_pred CcceEEEE--EecCCCcceeeEEEEeCCeEEEEeCcc--------ccCCEEEEEECCCCcEEEEE
Q 039648 182 NKCWAKHL--TLGPFFNFRINFGFWKNDAFFIESNSR--------IYGGCLFLHEHRTKEIKNLQ 236 (254)
Q Consensus 182 ~~~W~~~~--~i~~~~~~~~~~~~~~~g~i~l~~~~~--------~~~~~~~~yd~~t~~~~~~~ 236 (254)
...|++.. .++... ...-..+..+|.|++.-... .....+..||+++++|+.+.
T Consensus 441 ~~~W~~~~~~~mp~~R-~~~~~~~l~~g~i~v~GG~~~~~~~~~~~~~~~v~~ydp~t~~W~~~~ 504 (656)
T 1k3i_A 441 TSPNTVFASNGLYFAR-TFHTSVVLPDGSTFITGGQRRGIPFEDSTPVFTPEIYVPEQDTFYKQN 504 (656)
T ss_dssp SCCEEEECTTCCSSCC-BSCEEEECTTSCEEEECCBSBCCTTCCCSBCCCCEEEEGGGTEEEECC
T ss_pred CCCeeEEccCCCCCCc-ccCCeEECCCCCEEEECCcccCcCcCCCCcccceEEEcCCCCceeecC
Confidence 67898875 444322 22223344477777765411 00245899999999998764
No 17
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=97.32 E-value=0.0028 Score=59.53 Aligned_cols=146 Identities=8% Similarity=-0.040 Sum_probs=94.1
Q ss_pred cCeEEEEEccCCceeecc-c-----cC------ceEEE--E-EEEEEEEecCCC--ceEEEEEECCCcceeEe-cCCCCC
Q 039648 89 VPNVQVYGFRTNSWREVH-G-----HQ------LDRYF--K-VCYWLVIADTRD--LKVILSFHMDNEVFEEI-KIPPHV 150 (254)
Q Consensus 89 ~~~~~Vys~~~~~Wr~~~-~-----~p------~~v~~--~-~lyWl~~~~~~~--~~~IvsfD~~~e~~~~i-~~P~~~ 150 (254)
...+++|+..+++|+.+. . +| ..+.+ + .+|-+....... ...+..||+.+.+|+.+ ++|...
T Consensus 411 ~~~v~~yd~~~~~W~~~~~~~p~~~~p~~R~~hs~~~~~~~~~lyv~GG~~~~~~~~~dv~~yd~~t~~W~~~~~~p~~R 490 (695)
T 2zwa_A 411 VNEILQLSIHYDKIDMKNIEVSSSEVPVARMCHTFTTISRNNQLLLIGGRKAPHQGLSDNWIFDMKTREWSMIKSLSHTR 490 (695)
T ss_dssp CCCEEEEEECSSCEEEEECCCCCSCCCCCCBSCEEEEETTTTEEEEECCBSSTTCBCCCCEEEETTTTEEEECCCCSBCC
T ss_pred cCcEEEEECCCCeEEEeccCCCCCCCCccccceEEEEEccCCEEEEEcCCCCCCCccccEEEEeCCCCcEEECCCCCCCc
Confidence 346899999999999987 3 22 45677 8 888765432211 24688999999999988 344333
Q ss_pred CceeEEEEe-CCeEEEEecCCCCEEEEEEECC-CcceEEEEEe---cCCCcceee-EEEEeC-CeEEEEeCcc----ccC
Q 039648 151 NYYSSISLY-EDSLSIVIPDAEQCFEIWVMND-NKCWAKHLTL---GPFFNFRIN-FGFWKN-DAFFIESNSR----IYG 219 (254)
Q Consensus 151 ~~~~~l~~~-~g~L~~~~~~~~~~~~IW~l~~-~~~W~~~~~i---~~~~~~~~~-~~~~~~-g~i~l~~~~~----~~~ 219 (254)
.....+.+ +|+|.++++..... ++|+++- ...|+++-.. +... ..+- +.+..+ +.|++.-+.. ...
T Consensus 491 -~~h~~~~~~~~~iyv~GG~~~~~-~v~~yd~~t~~W~~~~~~g~~p~~r-~~~~a~v~~~~~~~iyv~GG~~~~~~~~~ 567 (695)
T 2zwa_A 491 -FRHSACSLPDGNVLILGGVTEGP-AMLLYNVTEEIFKDVTPKDEFFQNS-LVSAGLEFDPVSKQGIILGGGFMDQTTVS 567 (695)
T ss_dssp -BSCEEEECTTSCEEEECCBCSSC-SEEEEETTTTEEEECCCSSGGGGSC-CBSCEEEEETTTTEEEEECCBCTTSSCBC
T ss_pred -ccceEEEEcCCEEEEECCCCCCC-CEEEEECCCCceEEccCCCCCCCcc-cceeEEEEeCCCCEEEEECCcCCCCCeee
Confidence 44555664 99999998532333 8888876 7889987652 2211 1122 222333 5676664320 013
Q ss_pred CEEEEEECCCCc------EEEEEE
Q 039648 220 GCLFLHEHRTKE------IKNLQV 237 (254)
Q Consensus 220 ~~~~~yd~~t~~------~~~~~~ 237 (254)
..+..||+++++ |+.+.-
T Consensus 568 ~~v~~yd~~~~~w~~~~~W~~~~~ 591 (695)
T 2zwa_A 568 DKAIIFKYDAENATEPITVIKKLQ 591 (695)
T ss_dssp CEEEEEEECTTCSSCCEEEEEEEE
T ss_pred CcEEEEEccCCccccceEEEEcCC
Confidence 568999999999 777744
No 18
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=96.30 E-value=0.024 Score=52.53 Aligned_cols=144 Identities=7% Similarity=0.056 Sum_probs=87.7
Q ss_pred cCeEEEEEcc--------CCceeeccccC----ceEEE--E-EEEEEEEecCC-------CceEEEEEECCCcceeEec-
Q 039648 89 VPNVQVYGFR--------TNSWREVHGHQ----LDRYF--K-VCYWLVIADTR-------DLKVILSFHMDNEVFEEIK- 145 (254)
Q Consensus 89 ~~~~~Vys~~--------~~~Wr~~~~~p----~~v~~--~-~lyWl~~~~~~-------~~~~IvsfD~~~e~~~~i~- 145 (254)
..+++||... ++.|+.+..+| ....+ + .+|-+...... ....+..||+.+.+|+.++
T Consensus 157 i~E~~v~~~~~~~~~dp~~~~W~~~~~~P~~~~~~av~~~~g~l~v~GG~~~~~~~~~~~~~~~~~~yd~~t~~w~~~~~ 236 (656)
T 1k3i_A 157 IAEINVFQASSYTAPQPGLGRWGPTIDLPIVPAAAAIEPTSGRVLMWSSYRNDAFGGSPGGITLTSSWDPSTGIVSDRTV 236 (656)
T ss_dssp ESEEEEEECSCCCCCCTTSCEEEEEEECSSCCSEEEEETTTTEEEEEEECCCTTTCSCCCSEEEEEEECTTTCCBCCCEE
T ss_pred EEEEEEeeccccccCCCCCCeeeeeccCCCCceeEEEEecCCEEEEEecccccccccCCCCeEEEEEEeCCCCcEEeCcc
Confidence 3466677654 57899876665 33445 7 78877643211 1246899999999998763
Q ss_pred CCCCCC-ceeEEE-EeCCeEEEEecCCCCEEEEEEECC-CcceEEEEEecCCCcceeeEEEEeCCeEEEEeCcc---ccC
Q 039648 146 IPPHVN-YYSSIS-LYEDSLSIVIPDAEQCFEIWVMND-NKCWAKHLTLGPFFNFRINFGFWKNDAFFIESNSR---IYG 219 (254)
Q Consensus 146 ~P~~~~-~~~~l~-~~~g~L~~~~~~~~~~~~IW~l~~-~~~W~~~~~i~~~~~~~~~~~~~~~g~i~l~~~~~---~~~ 219 (254)
+|.... .....+ ..+|+|.++...... ++|+++- ...|++.-.++..+ ...-..+..+|.|++.-... ...
T Consensus 237 ~~~~~~~~~~~~~~~~~g~lyv~GG~~~~--~v~~yd~~t~~W~~~~~~~~~R-~~~s~~~~~dg~iyv~GG~~~~~~~~ 313 (656)
T 1k3i_A 237 TVTKHDMFCPGISMDGNGQIVVTGGNDAK--KTSLYDSSSDSWIPGPDMQVAR-GYQSSATMSDGRVFTIGGSWSGGVFE 313 (656)
T ss_dssp EECSCCCSSCEEEECTTSCEEEECSSSTT--CEEEEEGGGTEEEECCCCSSCC-SSCEEEECTTSCEEEECCCCCSSSCC
T ss_pred cCCCCCCccccccCCCCCCEEEeCCCCCC--ceEEecCcCCceeECCCCCccc-cccceEEecCCeEEEEeCcccCCccc
Confidence 333222 222333 358999999853344 4566554 57899875544322 11223334477777765411 012
Q ss_pred CEEEEEECCCCcEEEE
Q 039648 220 GCLFLHEHRTKEIKNL 235 (254)
Q Consensus 220 ~~~~~yd~~t~~~~~~ 235 (254)
..+..||+++++|+.+
T Consensus 314 ~~~e~yd~~t~~W~~~ 329 (656)
T 1k3i_A 314 KNGEVYSPSSKTWTSL 329 (656)
T ss_dssp CCEEEEETTTTEEEEE
T ss_pred ccceEeCCCCCcceeC
Confidence 4688999999999986
No 19
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=84.46 E-value=15 Score=29.86 Aligned_cols=134 Identities=13% Similarity=0.163 Sum_probs=71.0
Q ss_pred eEEEEEccCCceeeccccC------ceEEEE-E--EEEEEEecCCCceEEEEEECCCcce-eEecCCCCCCceeEEEEe-
Q 039648 91 NVQVYGFRTNSWREVHGHQ------LDRYFK-V--CYWLVIADTRDLKVILSFHMDNEVF-EEIKIPPHVNYYSSISLY- 159 (254)
Q Consensus 91 ~~~Vys~~~~~Wr~~~~~p------~~v~~~-~--lyWl~~~~~~~~~~IvsfD~~~e~~-~~i~~P~~~~~~~~l~~~- 159 (254)
.+.|++..++.|..+.... ..+.++ . -..+..... ...|..+|+.+..- ..+.+......-..+.-.
T Consensus 80 ~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~--d~~i~v~d~~~~~~~~~~~~~~~~~~v~~~~~~~ 157 (379)
T 3jrp_A 80 KVLIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASS--DGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAP 157 (379)
T ss_dssp CEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEET--TSEEEEEECCTTSCCCEEEEECCTTCEEEEEECC
T ss_pred EEEEEEcCCCceeEeeeecCCCcceEEEEeCCCCCCCEEEEecC--CCcEEEEecCCCCceeeEEecCCCCceEEEEEcC
Confidence 6788998888776654331 222222 2 112222211 23678888876622 212111111111222222
Q ss_pred -------------CCeEEEEecCCCCEEEEEEECC-CcceEEEEEecCCCcceeeEEEEeC---CeEEEEeCccccCCEE
Q 039648 160 -------------EDSLSIVIPDAEQCFEIWVMND-NKCWAKHLTLGPFFNFRINFGFWKN---DAFFIESNSRIYGGCL 222 (254)
Q Consensus 160 -------------~g~L~~~~~~~~~~~~IW~l~~-~~~W~~~~~i~~~~~~~~~~~~~~~---g~i~l~~~~~~~~~~~ 222 (254)
++.+.++.. ....+.||-++. ...|.....+..-.....-+.+..+ +.+++.... ++.+
T Consensus 158 ~~~~~~~~~~~~~~~~~l~~~~-~dg~i~i~d~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~---dg~i 233 (379)
T 3jrp_A 158 ATIEEDGEHNGTKESRKFVTGG-ADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYLASVSQ---DRTC 233 (379)
T ss_dssp CC----------CTTCEEEEEE-TTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEET---TSCE
T ss_pred ccccccccccCCCCCCEEEEEe-CCCeEEEEEecCCCcceeeEEEEecccCcEeEEEECCCCCCCCeEEEEeC---CCEE
Confidence 355555553 367899999986 5667776666532222233445556 666665542 6788
Q ss_pred EEEECCCC
Q 039648 223 FLHEHRTK 230 (254)
Q Consensus 223 ~~yd~~t~ 230 (254)
.+||++++
T Consensus 234 ~iwd~~~~ 241 (379)
T 3jrp_A 234 IIWTQDNE 241 (379)
T ss_dssp EEEEESST
T ss_pred EEEeCCCC
Confidence 89998876
No 20
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=84.09 E-value=27 Score=32.45 Aligned_cols=180 Identities=11% Similarity=0.095 Sum_probs=88.8
Q ss_pred cEEEEcCcccccccCCCCCCCCCCCCCCCCcceEEEEeeCCCCCeEEEEEeeeeccccccCCCcCeEEEEEccCCceeec
Q 039648 26 RLTIWNPATREFRNLPNYKYCNSSNRLIPPSTFICLESDPINNDFKLLFVHNLWNEKRKRYGKVPNVQVYGFRTNSWREV 105 (254)
Q Consensus 26 ~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~g~g~d~~~~~yKVv~~~~~~~~~~~~~~~~~~~~Vys~~~~~Wr~~ 105 (254)
.+.|||..++....+...... .....++.+.+..+.-.++.... .-.+.|++..++.|..+
T Consensus 32 ~I~vwd~~~~~~~~~~~l~~h--------~~~V~~l~~s~~~~~~~l~s~s~-----------Dg~I~vwd~~~~~~~~~ 92 (753)
T 3jro_A 32 TIKIFEVEGETHKLIDTLTGH--------EGPVWRVDWAHPKFGTILASCSY-----------DGKVLIWKEENGRWSQI 92 (753)
T ss_dssp EEEEEEEETTEEEEEEEECCC--------SSCEEEEEECCTTSCSEEEEEET-----------TSCEEEEEEETTEEEEE
T ss_pred cEEEEecCCCCCccceeccCC--------cCceEEEEecCCCCCCEEEEEeC-----------CCeEEEEECCCCccccc
Confidence 479999874333322211111 12345666665532233333221 23678888888877655
Q ss_pred cccC------ceEEEE-E--EEEEEEecCCCceEEEEEECCCccee-EecCCCCCCceeEEEEe--------------CC
Q 039648 106 HGHQ------LDRYFK-V--CYWLVIADTRDLKVILSFHMDNEVFE-EIKIPPHVNYYSSISLY--------------ED 161 (254)
Q Consensus 106 ~~~p------~~v~~~-~--lyWl~~~~~~~~~~IvsfD~~~e~~~-~i~~P~~~~~~~~l~~~--------------~g 161 (254)
.... ..+.++ . =..+.... ....|..+|+.+..-. ...+.........+.-. +|
T Consensus 93 ~~~~~h~~~V~~v~~sp~~~~~~l~sgs--~dg~I~vwdl~~~~~~~~~~~~~~~~~v~~l~~~p~~~~~~~~~~~~~d~ 170 (753)
T 3jro_A 93 AVHAVHSASVNSVQWAPHEYGPLLLVAS--SDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIEEDGEHNGTKES 170 (753)
T ss_dssp EEECCCSSCEEEEEECCGGGCSEEEEEE--TTSEEEEEECCSSSCCCCEEEECCSSCEEEEEECCCC---------CGGG
T ss_pred ccccCCCCCeEEEEECCCCCCCEEEEEe--CCCcEEEEEeecCCCcceeEeecCCCceEEEEecCcccccccccccCCCC
Confidence 4331 222222 2 11222221 1236788888766211 11111111111222222 24
Q ss_pred eEEEEecCCCCEEEEEEECC-CcceEEEEEecCCCcceeeEEEEeC---CeEEEEeCccccCCEEEEEECCCC
Q 039648 162 SLSIVIPDAEQCFEIWVMND-NKCWAKHLTLGPFFNFRINFGFWKN---DAFFIESNSRIYGGCLFLHEHRTK 230 (254)
Q Consensus 162 ~L~~~~~~~~~~~~IW~l~~-~~~W~~~~~i~~~~~~~~~~~~~~~---g~i~l~~~~~~~~~~~~~yd~~t~ 230 (254)
.+.+++. ....+.||-++. ...+.....+..-.....-+.+..+ +..++.... ++.+.+||++++
T Consensus 171 ~~l~sgs-~dg~I~iwd~~~~~~~~~~~~~~~~h~~~V~~l~~sp~~~~~~~l~s~s~---Dg~I~iwd~~~~ 239 (753)
T 3jro_A 171 RKFVTGG-ADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYLASVSQ---DRTCIIWTQDNE 239 (753)
T ss_dssp CCEEEEE-TTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEES---SSCEEEEEESSS
T ss_pred CEEEEEE-CCCeEEEEeccCCcccceeeeeecCCCCcEEEEEeccCCCCCCEEEEEec---CCEEEEecCCCC
Confidence 4444442 367899999987 5566666665432212233444555 676666552 678899998875
No 21
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=83.76 E-value=19 Score=30.43 Aligned_cols=193 Identities=6% Similarity=0.080 Sum_probs=89.7
Q ss_pred ccCceEEEEEcCCccEEEEcCcccccccCCCCCCCCCCCCCCCCcceEEEEeeCCCCCeEEEEEeeeeccccccCCCcCe
Q 039648 12 YHDGLFCIMQSSTNRLTIWNPATREFRNLPNYKYCNSSNRLIPPSTFICLESDPINNDFKLLFVHNLWNEKRKRYGKVPN 91 (254)
Q Consensus 12 scnGLlcl~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~g~g~d~~~~~yKVv~~~~~~~~~~~~~~~~~~ 91 (254)
|.+++|....+. .++|||..|++...+-..... ......+.|.|.. .|-++ .. ..-.
T Consensus 114 S~~n~lAvgld~--tV~lWd~~tg~~~~~~~~~~~--------~~~V~sv~fspdg-~~las--gs----------~Dg~ 170 (420)
T 4gga_A 114 SSGNVLAVALDN--SVYLWSASSGDILQLLQMEQP--------GEYISSVAWIKEG-NYLAV--GT----------SSAE 170 (420)
T ss_dssp CTTSEEEEEETT--EEEEEETTTCCEEEEEECCST--------TCCEEEEEECTTS-SEEEE--EE----------TTSC
T ss_pred CCCCEEEEEeCC--EEEEEECCCCCEEEEEEecCC--------CCcEEEEEECCCC-CEEEE--EE----------CCCe
Confidence 567777665544 369999999987765332111 1234556666643 33222 11 1236
Q ss_pred EEEEEccCCce-eeccccC---ceEEEE-EEEEEEEecCCCceEEEEEECCCcceeEecCCCCCCceeEEEE-eCCeEEE
Q 039648 92 VQVYGFRTNSW-REVHGHQ---LDRYFK-VCYWLVIADTRDLKVILSFHMDNEVFEEIKIPPHVNYYSSISL-YEDSLSI 165 (254)
Q Consensus 92 ~~Vys~~~~~W-r~~~~~p---~~v~~~-~lyWl~~~~~~~~~~IvsfD~~~e~~~~i~~P~~~~~~~~l~~-~~g~L~~ 165 (254)
+.|++..++.- +...... ..+..+ .+ +..... ...+..+|..........+.........+.. -.|...+
T Consensus 171 v~iWd~~~~~~~~~~~~h~~~v~~~s~~~~~--l~sgs~--d~~i~~~d~~~~~~~~~~~~~h~~~~~~~~~~~~g~~l~ 246 (420)
T 4gga_A 171 VQLWDVQQQKRLRNMTSHSARVGSLSWNSYI--LSSGSR--SGHIHHHDVRVAEHHVATLSGHSQEVCGLRWAPDGRHLA 246 (420)
T ss_dssp EEEEETTTTEEEEEECCCSSCEEEEEEETTE--EEEEET--TSEEEEEETTSSSCEEEEEECCSSCEEEEEECTTSSEEE
T ss_pred EEEEEcCCCcEEEEEeCCCCceEEEeeCCCE--EEEEeC--CCceeEeeecccceeeEEecccccceeeeeecCCCCeee
Confidence 78888877542 2222111 233333 22 222211 1356677766554332222221111122222 2444443
Q ss_pred EecCCCCEEEEEEECC-CcceEEEEEecCCCcceeeEEEEe-CCeEEEE-eCccccCCEEEEEECCCCcEEE
Q 039648 166 VIPDAEQCFEIWVMND-NKCWAKHLTLGPFFNFRINFGFWK-NDAFFIE-SNSRIYGGCLFLHEHRTKEIKN 234 (254)
Q Consensus 166 ~~~~~~~~~~IW~l~~-~~~W~~~~~i~~~~~~~~~~~~~~-~g~i~l~-~~~~~~~~~~~~yd~~t~~~~~ 234 (254)
.. .....+.||-+.. ...+..+............+.+.. ++.++.. ... .++.+.+||+++++...
T Consensus 247 s~-~~D~~v~i~~~~~~~~~~~~~~~~~~~~~~V~~~~~~p~~~~~la~~~gs--~D~~I~iwd~~t~~~~~ 315 (420)
T 4gga_A 247 SG-GNDNLVNVWPSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGT--SDRHIRIWNVCSGACLS 315 (420)
T ss_dssp EE-ETTSCEEEEESSCCSSCSCCSEEECCCSSCEEEEEECTTCTTEEEEEECT--TTCEEEEEETTTTEEEE
T ss_pred ee-eccccceEEeeccccccceeeeeecccCCceeeeeeCCCcccEEEEEeec--CCCEEEEEeCCccccce
Confidence 33 2367889998876 222222222221111112223332 2334333 221 25678888888876543
No 22
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=81.10 E-value=19 Score=28.73 Aligned_cols=98 Identities=10% Similarity=0.159 Sum_probs=64.4
Q ss_pred ceEEEEEECCCcce-eEecCCCCCCceeEEEEeCCeEEEEecCCCCEEEEEEECCCcceEEEEEecCCCcceeeEEEEeC
Q 039648 128 LKVILSFHMDNEVF-EEIKIPPHVNYYSSISLYEDSLSIVIPDAEQCFEIWVMNDNKCWAKHLTLGPFFNFRINFGFWKN 206 (254)
Q Consensus 128 ~~~IvsfD~~~e~~-~~i~~P~~~~~~~~l~~~~g~L~~~~~~~~~~~~IW~l~~~~~W~~~~~i~~~~~~~~~~~~~~~ 206 (254)
...|..+|+++.+- +.+++|... ....+...+++|.++.- ... .+|+.+- ..-.++.+++... .+.++..+
T Consensus 42 ~S~v~~vD~~tgkv~~~~~l~~~~-fgeGi~~~~~~ly~ltw-~~~--~v~v~D~-~tl~~~~ti~~~~---~Gwglt~d 113 (243)
T 3mbr_X 42 RSSVRKVDLETGRILQRAEVPPPY-FGAGIVAWRDRLIQLTW-RNH--EGFVYDL-ATLTPRARFRYPG---EGWALTSD 113 (243)
T ss_dssp SCEEEEEETTTCCEEEEEECCTTC-CEEEEEEETTEEEEEES-SSS--EEEEEET-TTTEEEEEEECSS---CCCEEEEC
T ss_pred CceEEEEECCCCCEEEEEeCCCCc-ceeEEEEeCCEEEEEEe-eCC--EEEEEEC-CcCcEEEEEeCCC---CceEEeeC
Confidence 35799999998755 667888754 34567778999998872 133 5566664 3445566666432 34566555
Q ss_pred Ce-EEEEeCccccCCEEEEEECCCCcE-EEEEE
Q 039648 207 DA-FFIESNSRIYGGCLFLHEHRTKEI-KNLQV 237 (254)
Q Consensus 207 g~-i~l~~~~~~~~~~~~~yd~~t~~~-~~~~~ 237 (254)
+. +++... +..+..+|++|.+. +.+.+
T Consensus 114 g~~L~vSdg----s~~l~~iDp~t~~~~~~I~V 142 (243)
T 3mbr_X 114 DSHLYMSDG----TAVIRKLDPDTLQQVGSIKV 142 (243)
T ss_dssp SSCEEEECS----SSEEEEECTTTCCEEEEEEC
T ss_pred CCEEEEECC----CCeEEEEeCCCCeEEEEEEE
Confidence 55 666654 78899999998654 44554
No 23
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=80.93 E-value=25 Score=29.86 Aligned_cols=189 Identities=10% Similarity=0.101 Sum_probs=85.5
Q ss_pred Cc-eEEEEEcCCccEEEEcCcccccccCCCCCCCCCCCCCCCCcceEEEEeeCCCCCeEEEEEeeeeccccccCCCcCeE
Q 039648 14 DG-LFCIMQSSTNRLTIWNPATREFRNLPNYKYCNSSNRLIPPSTFICLESDPINNDFKLLFVHNLWNEKRKRYGKVPNV 92 (254)
Q Consensus 14 nG-Llcl~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~g~g~d~~~~~yKVv~~~~~~~~~~~~~~~~~~~ 92 (254)
++ +|+.....+ .+.|||..+++...+-..... .....++.|.|..+.+ ++... ..-.+
T Consensus 131 ~~~~lasGs~dg-~i~lWd~~~~~~~~~~~~~gH--------~~~V~~l~f~p~~~~~-l~s~s-----------~D~~v 189 (435)
T 4e54_B 131 HPSTVAVGSKGG-DIMLWNFGIKDKPTFIKGIGA--------GGSITGLKFNPLNTNQ-FYASS-----------MEGTT 189 (435)
T ss_dssp CTTCEEEEETTS-CEEEECSSCCSCCEEECCCSS--------SCCCCEEEECSSCTTE-EEEEC-----------SSSCE
T ss_pred CCCEEEEEeCCC-EEEEEECCCCCceeEEEccCC--------CCCEEEEEEeCCCCCE-EEEEe-----------CCCEE
Confidence 44 343333333 479999998875433221111 1123455666654443 22221 12256
Q ss_pred EEEEccCCceeecccc---C---ceEEEE-EEEEEEEecCCCceEEEEEECCCcceeEecCCCCCCceeEEEEe-CC-eE
Q 039648 93 QVYGFRTNSWREVHGH---Q---LDRYFK-VCYWLVIADTRDLKVILSFHMDNEVFEEIKIPPHVNYYSSISLY-ED-SL 163 (254)
Q Consensus 93 ~Vys~~~~~Wr~~~~~---p---~~v~~~-~lyWl~~~~~~~~~~IvsfD~~~e~~~~i~~P~~~~~~~~l~~~-~g-~L 163 (254)
.|++++++.-+..... . ..+.++ .-..+..... ...|..+|++.+....+..-.. .-..+.-. .+ .+
T Consensus 190 ~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~--dg~i~~wd~~~~~~~~~~~h~~--~v~~v~~~p~~~~~ 265 (435)
T 4e54_B 190 RLQDFKGNILRVFASSDTINIWFCSLDVSASSRMVVTGDN--VGNVILLNMDGKELWNLRMHKK--KVTHVALNPCCDWF 265 (435)
T ss_dssp EEEETTSCEEEEEECCSSCSCCCCCEEEETTTTEEEEECS--SSBEEEEESSSCBCCCSBCCSS--CEEEEEECTTCSSE
T ss_pred EEeeccCCceeEEeccCCCCccEEEEEECCCCCEEEEEeC--CCcEeeeccCcceeEEEecccc--eEEeeeecCCCceE
Confidence 7788777654443222 1 233333 1112222221 1257778887664443322111 11222222 23 34
Q ss_pred EEEecCCCCEEEEEEECC-CcceEEEEEecCCCcceeeEEEEeCCeEEEEeCccccCCEEEEEECCCCcE
Q 039648 164 SIVIPDAEQCFEIWVMND-NKCWAKHLTLGPFFNFRINFGFWKNDAFFIESNSRIYGGCLFLHEHRTKEI 232 (254)
Q Consensus 164 ~~~~~~~~~~~~IW~l~~-~~~W~~~~~i~~~~~~~~~~~~~~~g~i~l~~~~~~~~~~~~~yd~~t~~~ 232 (254)
.+.+ .....+.||-++. ...=.......... -..-+.+..+|..++.... ++.+.+||.++...
T Consensus 266 ~~s~-s~d~~v~iwd~~~~~~~~~~~~~~~h~~-~v~~~~~spdg~~l~s~~~---D~~i~iwd~~~~~~ 330 (435)
T 4e54_B 266 LATA-SVDQTVKIWDLRQVRGKASFLYSLPHRH-PVNAACFSPDGARLLTTDQ---KSEIRVYSASQWDC 330 (435)
T ss_dssp EEEE-ETTSBCCEEETTTCCSSSCCSBCCBCSS-CEEECCBCTTSSEEEEEES---SSCEEEEESSSSSS
T ss_pred EEEe-cCcceeeEEecccccccceEEEeeeccc-cccceeECCCCCeeEEEcC---CCEEEEEECCCCcc
Confidence 4333 3467889998876 11000000001101 1112233456766655442 67888999887643
No 24
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=78.79 E-value=26 Score=28.82 Aligned_cols=190 Identities=6% Similarity=-0.003 Sum_probs=94.3
Q ss_pred ccCc--eEEEEEcCCccEEEEcCcccccccCCCCCCCCCCCCCCCCcceEEEEeeCCCCCeEEEEEeeeeccccccCCCc
Q 039648 12 YHDG--LFCIMQSSTNRLTIWNPATREFRNLPNYKYCNSSNRLIPPSTFICLESDPINNDFKLLFVHNLWNEKRKRYGKV 89 (254)
Q Consensus 12 scnG--Llcl~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~g~g~d~~~~~yKVv~~~~~~~~~~~~~~~~ 89 (254)
+-+| +|+.....+ .+.|||..+++....-..... ......+.|.|..+.+ ++.. . ..
T Consensus 82 ~~~~~~~l~s~~~dg-~i~iwd~~~~~~~~~~~~~~h--------~~~v~~~~~~~~~~~~-l~s~-~----------~d 140 (383)
T 3ei3_B 82 HPTHPTTVAVGSKGG-DIILWDYDVQNKTSFIQGMGP--------GDAITGMKFNQFNTNQ-LFVS-S----------IR 140 (383)
T ss_dssp CSSCTTEEEEEEBTS-CEEEEETTSTTCEEEECCCST--------TCBEEEEEEETTEEEE-EEEE-E----------TT
T ss_pred CCCCCCEEEEEcCCC-eEEEEeCCCcccceeeecCCc--------CCceeEEEeCCCCCCE-EEEE-e----------CC
Confidence 4455 344333333 479999998876654322111 1234566666633222 2221 1 12
Q ss_pred CeEEEEEccCCceeeccccC------ceEEEE-EEEEEEEecCCCceEEEEEECCCcceeEecCCCCCCceeEEEEe-CC
Q 039648 90 PNVQVYGFRTNSWREVHGHQ------LDRYFK-VCYWLVIADTRDLKVILSFHMDNEVFEEIKIPPHVNYYSSISLY-ED 161 (254)
Q Consensus 90 ~~~~Vys~~~~~Wr~~~~~p------~~v~~~-~lyWl~~~~~~~~~~IvsfD~~~e~~~~i~~P~~~~~~~~l~~~-~g 161 (254)
-.+.+++..++..+.+.... ..+.++ .-..+.... ....|..+|+..+....+...... -..+.-. +|
T Consensus 141 ~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~--~d~~i~i~d~~~~~~~~~~~h~~~--v~~~~~~~~~ 216 (383)
T 3ei3_B 141 GATTLRDFSGSVIQVFAKTDSWDYWYCCVDVSVSRQMLATGD--STGRLLLLGLDGHEIFKEKLHKAK--VTHAEFNPRC 216 (383)
T ss_dssp TEEEEEETTSCEEEEEECCCCSSCCEEEEEEETTTTEEEEEE--TTSEEEEEETTSCEEEEEECSSSC--EEEEEECSSC
T ss_pred CEEEEEECCCCceEEEeccCCCCCCeEEEEECCCCCEEEEEC--CCCCEEEEECCCCEEEEeccCCCc--EEEEEECCCC
Confidence 36678888776555443221 222222 111122221 123688889876655555432221 1223222 33
Q ss_pred e-EEEEecCCCCEEEEEEECC-CcceEEEEEecCCCcceeeEEEEe-CCeEEEEeCccccCCEEEEEECCCCc
Q 039648 162 S-LSIVIPDAEQCFEIWVMND-NKCWAKHLTLGPFFNFRINFGFWK-NDAFFIESNSRIYGGCLFLHEHRTKE 231 (254)
Q Consensus 162 ~-L~~~~~~~~~~~~IW~l~~-~~~W~~~~~i~~~~~~~~~~~~~~-~g~i~l~~~~~~~~~~~~~yd~~t~~ 231 (254)
. +.+.+ .....+.||-++. ...-.....+.... ...-+.+.. ++..++.... ++.+.+||+++++
T Consensus 217 ~~~l~s~-~~d~~i~iwd~~~~~~~~~~~~~~~~~~-~v~~~~~s~~~~~~l~~~~~---d~~i~iwd~~~~~ 284 (383)
T 3ei3_B 217 DWLMATS-SVDATVKLWDLRNIKDKNSYIAEMPHEK-PVNAAYFNPTDSTKLLTTDQ---RNEIRVYSSYDWS 284 (383)
T ss_dssp TTEEEEE-ETTSEEEEEEGGGCCSTTCEEEEEECSS-CEEEEEECTTTSCEEEEEES---SSEEEEEETTBTT
T ss_pred CCEEEEE-eCCCEEEEEeCCCCCcccceEEEecCCC-ceEEEEEcCCCCCEEEEEcC---CCcEEEEECCCCc
Confidence 3 44444 3467899999986 22222333333222 223345556 7776665542 7889999998754
No 25
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=76.59 E-value=29 Score=28.11 Aligned_cols=108 Identities=12% Similarity=0.087 Sum_probs=65.5
Q ss_pred EEEEEEEecCCCceEEEEEECCCcce-eEecCCCCCCceeEEEEeCCeEEEEecCCCCEEEEEEECCCcceEEEEEecCC
Q 039648 116 VCYWLVIADTRDLKVILSFHMDNEVF-EEIKIPPHVNYYSSISLYEDSLSIVIPDAEQCFEIWVMNDNKCWAKHLTLGPF 194 (254)
Q Consensus 116 ~lyWl~~~~~~~~~~IvsfD~~~e~~-~~i~~P~~~~~~~~l~~~~g~L~~~~~~~~~~~~IW~l~~~~~W~~~~~i~~~ 194 (254)
.||--+..+ ....|..+|+++.+- +.+++|+.. ....+...+++|.++.- ... .+|+.+- ..-..+.+++..
T Consensus 54 ~LyestG~~--g~S~v~~vD~~Tgkv~~~~~l~~~~-FgeGit~~g~~ly~ltw-~~~--~v~v~D~-~t~~~~~ti~~~ 126 (262)
T 3nol_A 54 YFYESTGLN--GRSSIRKVDIESGKTLQQIELGKRY-FGEGISDWKDKIVGLTW-KNG--LGFVWNI-RNLRQVRSFNYD 126 (262)
T ss_dssp EEEEEEEET--TEEEEEEECTTTCCEEEEEECCTTC-CEEEEEEETTEEEEEES-SSS--EEEEEET-TTCCEEEEEECS
T ss_pred EEEEECCCC--CCceEEEEECCCCcEEEEEecCCcc-ceeEEEEeCCEEEEEEe-eCC--EEEEEEC-ccCcEEEEEECC
Confidence 665443332 234799999998854 567777654 34557778999988873 133 4556553 334455556542
Q ss_pred CcceeeEEEEeCCe-EEEEeCccccCCEEEEEECCCCcE-EEEEE
Q 039648 195 FNFRINFGFWKNDA-FFIESNSRIYGGCLFLHEHRTKEI-KNLQV 237 (254)
Q Consensus 195 ~~~~~~~~~~~~g~-i~l~~~~~~~~~~~~~yd~~t~~~-~~~~~ 237 (254)
. ...++..++. +++... +..+...|++|.+. +.+.+
T Consensus 127 ~---eG~glt~dg~~L~~SdG----s~~i~~iDp~T~~v~~~I~V 164 (262)
T 3nol_A 127 G---EGWGLTHNDQYLIMSDG----TPVLRFLDPESLTPVRTITV 164 (262)
T ss_dssp S---CCCCEEECSSCEEECCS----SSEEEEECTTTCSEEEEEEC
T ss_pred C---CceEEecCCCEEEEECC----CCeEEEEcCCCCeEEEEEEe
Confidence 2 3344555565 555443 67899999998544 44444
No 26
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=71.74 E-value=33 Score=26.69 Aligned_cols=184 Identities=11% Similarity=-0.024 Sum_probs=91.1
Q ss_pred ccCceEEEEEcCCccEEEEcCcccccccCCCCCCCCCCCCCCCCcceEEEEeeCCCCCeEEEEEeeeeccccccCCCcCe
Q 039648 12 YHDGLFCIMQSSTNRLTIWNPATREFRNLPNYKYCNSSNRLIPPSTFICLESDPINNDFKLLFVHNLWNEKRKRYGKVPN 91 (254)
Q Consensus 12 scnGLlcl~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~g~g~d~~~~~yKVv~~~~~~~~~~~~~~~~~~ 91 (254)
..+|-+.+....+..++++|| +++...+..+... ....++.+|+..+ +.. ... ....
T Consensus 107 ~~~g~l~v~~~~~~~i~~~d~-~g~~~~~~~~~~~---------~~~~~i~~~~~g~---l~v-~~~---------~~~~ 163 (299)
T 2z2n_A 107 GPNGDIWFTEMNGNRIGRITD-DGKIREYELPNKG---------SYPSFITLGSDNA---LWF-TEN---------QNNA 163 (299)
T ss_dssp CTTSCEEEEETTTTEEEEECT-TCCEEEEECSSTT---------CCEEEEEECTTSC---EEE-EET---------TTTE
T ss_pred CCCCCEEEEecCCceEEEECC-CCCEEEecCCCCC---------CCCceEEEcCCCC---EEE-EeC---------CCCE
Confidence 346666655543335688898 7666544322111 1245666665432 221 110 1123
Q ss_pred EEEEEccCCceeecccc-----CceEEEE---EEEEEEEecCCCceEEEEEECCCcceeEecCCCCCCceeEEEEe-CCe
Q 039648 92 VQVYGFRTNSWREVHGH-----QLDRYFK---VCYWLVIADTRDLKVILSFHMDNEVFEEIKIPPHVNYYSSISLY-EDS 162 (254)
Q Consensus 92 ~~Vys~~~~~Wr~~~~~-----p~~v~~~---~lyWl~~~~~~~~~~IvsfD~~~e~~~~i~~P~~~~~~~~l~~~-~g~ 162 (254)
+.+|+. ++..+..... |.++.++ .+ |++... ...|..+|. ++++..+.+|........+... +|.
T Consensus 164 i~~~~~-~g~~~~~~~~~~~~~~~~i~~~~~g~l-~v~~~~---~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~~~~g~ 237 (299)
T 2z2n_A 164 IGRITE-SGDITEFKIPTPASGPVGITKGNDDAL-WFVEII---GNKIGRITT-SGEITEFKIPTPNARPHAITAGAGID 237 (299)
T ss_dssp EEEECT-TCCEEEEECSSTTCCEEEEEECTTSSE-EEEETT---TTEEEEECT-TCCEEEEECSSTTCCEEEEEECSTTC
T ss_pred EEEEcC-CCcEEEeeCCCCCCcceeEEECCCCCE-EEEccC---CceEEEECC-CCcEEEEECCCCCCCceeEEECCCCC
Confidence 445555 4444433111 2455554 55 554432 237999999 7777777666332222344443 677
Q ss_pred EEEEecCCCCEEEEEEECCCcceEEEEEecCCCcceeeEEEEeCCeEEEEeCccccCCEEEEEECCCCcEE
Q 039648 163 LSIVIPDAEQCFEIWVMNDNKCWAKHLTLGPFFNFRINFGFWKNDAFFIESNSRIYGGCLFLHEHRTKEIK 233 (254)
Q Consensus 163 L~~~~~~~~~~~~IW~l~~~~~W~~~~~i~~~~~~~~~~~~~~~g~i~l~~~~~~~~~~~~~yd~~t~~~~ 233 (254)
|.+... ....+.+|-.+ ... ..+.++.......-+.+ .+|.+++... ...+..+|+++++++
T Consensus 238 l~v~~~-~~~~i~~~d~~--g~~-~~~~~~~~~~~~~~i~~-~~g~l~v~~~----~~~l~~~~~~~~~~~ 299 (299)
T 2z2n_A 238 LWFTEW-GANKIGRLTSN--NII-EEYPIQIKSAEPHGICF-DGETIWFAME----CDKIGKLTLIKDNME 299 (299)
T ss_dssp EEEEET-TTTEEEEEETT--TEE-EEEECSSSSCCEEEEEE-CSSCEEEEET----TTEEEEEEEC-----
T ss_pred EEEecc-CCceEEEECCC--Cce-EEEeCCCCCCccceEEe-cCCCEEEEec----CCcEEEEEcCcccCC
Confidence 766652 24455555442 221 22223211112233445 7788888876 578999999987653
No 27
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=68.38 E-value=46 Score=26.97 Aligned_cols=111 Identities=10% Similarity=0.024 Sum_probs=65.6
Q ss_pred ceEEEE--EEEEEEEecCCCceEEEEEECCCcce-eEecCCCCCCceeEEEEeCCeEEEEecCCCCEEEEEEECCCcceE
Q 039648 110 LDRYFK--VCYWLVIADTRDLKVILSFHMDNEVF-EEIKIPPHVNYYSSISLYEDSLSIVIPDAEQCFEIWVMNDNKCWA 186 (254)
Q Consensus 110 ~~v~~~--~lyWl~~~~~~~~~~IvsfD~~~e~~-~~i~~P~~~~~~~~l~~~~g~L~~~~~~~~~~~~IW~l~~~~~W~ 186 (254)
.++..+ .||--+ ... ..|..+|+++.+- +.+ +|+.. ....+...+++|.++.- ... .+|+.+- ..-.
T Consensus 58 qGL~~~~~~Ly~st-G~~---g~v~~iD~~Tgkv~~~~-l~~~~-FgeGit~~g~~Ly~ltw-~~~--~v~V~D~-~Tl~ 127 (268)
T 3nok_A 58 QGLVFHQGHFFEST-GHQ---GTLRQLSLESAQPVWME-RLGNI-FAEGLASDGERLYQLTW-TEG--LLFTWSG-MPPQ 127 (268)
T ss_dssp EEEEEETTEEEEEE-TTT---TEEEECCSSCSSCSEEE-ECTTC-CEEEEEECSSCEEEEES-SSC--EEEEEET-TTTE
T ss_pred ceEEEECCEEEEEc-CCC---CEEEEEECCCCcEEeEE-CCCCc-ceeEEEEeCCEEEEEEc-cCC--EEEEEEC-CcCc
Confidence 455444 555433 221 2489999998754 456 77643 33457778899988872 123 5666664 3445
Q ss_pred EEEEecCCCcceeeEEEEeCCe-EEEEeCccccCCEEEEEECCCCcE-EEEEE
Q 039648 187 KHLTLGPFFNFRINFGFWKNDA-FFIESNSRIYGGCLFLHEHRTKEI-KNLQV 237 (254)
Q Consensus 187 ~~~~i~~~~~~~~~~~~~~~g~-i~l~~~~~~~~~~~~~yd~~t~~~-~~~~~ 237 (254)
.+.+++... ...++..++. +++... +..+..+|++|.+. +.+.+
T Consensus 128 ~~~ti~~~~---eGwGLt~Dg~~L~vSdG----s~~l~~iDp~T~~v~~~I~V 173 (268)
T 3nok_A 128 RERTTRYSG---EGWGLCYWNGKLVRSDG----GTMLTFHEPDGFALVGAVQV 173 (268)
T ss_dssp EEEEEECSS---CCCCEEEETTEEEEECS----SSEEEEECTTTCCEEEEEEC
T ss_pred EEEEEeCCC---ceeEEecCCCEEEEECC----CCEEEEEcCCCCeEEEEEEe
Confidence 555665432 2344444454 555554 78999999998644 44544
No 28
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=67.12 E-value=50 Score=26.85 Aligned_cols=102 Identities=12% Similarity=0.152 Sum_probs=58.6
Q ss_pred EEEEEECCCcceeEec----CCCCCCceeEEEEe-CCeEEEEecCC-CCEEEEEEECC-CcceEEEEEecCCCcceeeEE
Q 039648 130 VILSFHMDNEVFEEIK----IPPHVNYYSSISLY-EDSLSIVIPDA-EQCFEIWVMND-NKCWAKHLTLGPFFNFRINFG 202 (254)
Q Consensus 130 ~IvsfD~~~e~~~~i~----~P~~~~~~~~l~~~-~g~L~~~~~~~-~~~~~IW~l~~-~~~W~~~~~i~~~~~~~~~~~ 202 (254)
.|..+|+++.++..+. .|........+... +|+..++.... ...+.||.++. .+.+..+..++. .....-+.
T Consensus 234 ~v~v~~~~~g~~~~~~~~~~~~~~~~~~~~i~~spdg~~l~v~~~~~~~~i~v~~~~~~~g~~~~~~~~~~-g~~~~~~~ 312 (361)
T 3scy_A 234 TVIAFRYADGMLDEIQTVAADTVNAQGSGDIHLSPDGKYLYASNRLKADGVAIFKVDETNGTLTKVGYQLT-GIHPRNFI 312 (361)
T ss_dssp EEEEEEEETTEEEEEEEEESCSSCCCCEEEEEECTTSSEEEEEECSSSCEEEEEEECTTTCCEEEEEEEEC-SSCCCEEE
T ss_pred eEEEEEecCCceEEeEEEecCCCCCCCcccEEECCCCCEEEEECCCCCCEEEEEEEcCCCCcEEEeeEecC-CCCCceEE
Confidence 6888888777664431 23221112233333 55544344344 67899999984 566777666654 21223456
Q ss_pred EEeCCeE-EEEeCccccCCEEEE--EECCCCcEEEE
Q 039648 203 FWKNDAF-FIESNSRIYGGCLFL--HEHRTKEIKNL 235 (254)
Q Consensus 203 ~~~~g~i-~l~~~~~~~~~~~~~--yd~~t~~~~~~ 235 (254)
+..+|.. +..... +..+.+ +|+++++++.+
T Consensus 313 ~spdg~~l~~~~~~---~~~v~v~~~d~~~g~~~~~ 345 (361)
T 3scy_A 313 ITPNGKYLLVACRD---TNVIQIFERDQATGLLTDI 345 (361)
T ss_dssp ECTTSCEEEEEETT---TTEEEEEEECTTTCCEEEC
T ss_pred ECCCCCEEEEEECC---CCCEEEEEEECCCCcEeec
Confidence 6678874 444431 455655 68888888765
No 29
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=65.91 E-value=48 Score=26.26 Aligned_cols=102 Identities=7% Similarity=0.113 Sum_probs=57.2
Q ss_pred EEEEEECCC--ccee---Ee-cCCCCCC---ceeEEEEe-CC-eEEEEecCCCCEEEEEEECC-CcceEEEEEecCCCcc
Q 039648 130 VILSFHMDN--EVFE---EI-KIPPHVN---YYSSISLY-ED-SLSIVIPDAEQCFEIWVMND-NKCWAKHLTLGPFFNF 197 (254)
Q Consensus 130 ~IvsfD~~~--e~~~---~i-~~P~~~~---~~~~l~~~-~g-~L~~~~~~~~~~~~IW~l~~-~~~W~~~~~i~~~~~~ 197 (254)
.|..+|+.. .++. .+ .+|.... ....+... +| .|.+.. .....+.+|.++. .+.+..+..++....
T Consensus 201 ~i~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~s~dg~~l~v~~-~~~~~i~v~d~~~~~~~~~~~~~~~~~~~- 278 (343)
T 1ri6_A 201 SVDVWELKDPHGNIECVQTLDMMPENFSDTRWAADIHITPDGRHLYACD-RTASLITVFSVSEDGSVLSKEGFQPTETQ- 278 (343)
T ss_dssp EEEEEESSCTTSCCEEEEEEECSCTTCCSCCCEEEEEECTTSSEEEEEE-TTTTEEEEEEECTTSCCEEEEEEEECSSS-
T ss_pred EEEEEEecCCCCcEEEEeeccccCccccccCCccceEECCCCCEEEEEe-cCCCEEEEEEEcCCCCceEEeeeecCCCc-
Confidence 677888843 4332 22 2443311 11123333 34 454444 4478899999985 456777766654332
Q ss_pred eeeEEEEeCCeEEEEeCccccCCEEEEE--ECCCCcEEEE
Q 039648 198 RINFGFWKNDAFFIESNSRIYGGCLFLH--EHRTKEIKNL 235 (254)
Q Consensus 198 ~~~~~~~~~g~i~l~~~~~~~~~~~~~y--d~~t~~~~~~ 235 (254)
..-+.+..+|..++.... .+..+.+| |.++++++.+
T Consensus 279 ~~~~~~s~dg~~l~~~~~--~~~~v~v~~~d~~~g~~~~~ 316 (343)
T 1ri6_A 279 PRGFNVDHSGKYLIAAGQ--KSHHISVYEIVGEQGLLHEK 316 (343)
T ss_dssp CCCEEECTTSSEEEEECT--TTCEEEEEEEETTTTEEEEE
T ss_pred cceEEECCCCCEEEEecC--CCCeEEEEEEcCCCceeeEc
Confidence 334556667774444431 15677777 7778877766
No 30
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=64.89 E-value=54 Score=26.43 Aligned_cols=98 Identities=10% Similarity=0.154 Sum_probs=60.7
Q ss_pred eEEEEEECCCcce-eEecCCCCCCceeEEEEeCCeEEEEecCCCCEEEEEEECCCcceEEEEEecCCCcceeeEEEEeCC
Q 039648 129 KVILSFHMDNEVF-EEIKIPPHVNYYSSISLYEDSLSIVIPDAEQCFEIWVMNDNKCWAKHLTLGPFFNFRINFGFWKND 207 (254)
Q Consensus 129 ~~IvsfD~~~e~~-~~i~~P~~~~~~~~l~~~~g~L~~~~~~~~~~~~IW~l~~~~~W~~~~~i~~~~~~~~~~~~~~~g 207 (254)
..|..+|+++.+- +.+++|... ....++..+++|.+..- ... .+++.+- ..-..+.+++.. .....++..+|
T Consensus 44 s~v~~iD~~tg~v~~~i~l~~~~-fgeGi~~~g~~lyv~t~-~~~--~v~viD~-~t~~v~~~i~~g--~~~g~glt~Dg 116 (266)
T 2iwa_A 44 SSVRQVALQTGKVENIHKMDDSY-FGEGLTLLNEKLYQVVW-LKN--IGFIYDR-RTLSNIKNFTHQ--MKDGWGLATDG 116 (266)
T ss_dssp CEEEEEETTTCCEEEEEECCTTC-CEEEEEEETTEEEEEET-TCS--EEEEEET-TTTEEEEEEECC--SSSCCEEEECS
T ss_pred CEEEEEECCCCCEEEEEecCCCc-ceEEEEEeCCEEEEEEe-cCC--EEEEEEC-CCCcEEEEEECC--CCCeEEEEECC
Confidence 4799999987754 556776643 23345666888888872 233 3555653 344555666543 11335565566
Q ss_pred e-EEEEeCccccCCEEEEEECCCCc-EEEEEE
Q 039648 208 A-FFIESNSRIYGGCLFLHEHRTKE-IKNLQV 237 (254)
Q Consensus 208 ~-i~l~~~~~~~~~~~~~yd~~t~~-~~~~~~ 237 (254)
. +++... +..+...|++|.+ .+.+.+
T Consensus 117 ~~l~vs~g----s~~l~viD~~t~~v~~~I~V 144 (266)
T 2iwa_A 117 KILYGSDG----TSILYEIDPHTFKLIKKHNV 144 (266)
T ss_dssp SSEEEECS----SSEEEEECTTTCCEEEEEEC
T ss_pred CEEEEECC----CCeEEEEECCCCcEEEEEEE
Confidence 5 665554 7899999999865 455554
No 31
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=64.38 E-value=40 Score=27.18 Aligned_cols=70 Identities=6% Similarity=0.099 Sum_probs=43.6
Q ss_pred CCeEEEEecCCCCEEEEEEECCCcceEEEEEecCCCcceeeEEEEeCCeEEEEeCccccCCEEEEEECCCCcEEE
Q 039648 160 EDSLSIVIPDAEQCFEIWVMNDNKCWAKHLTLGPFFNFRINFGFWKNDAFFIESNSRIYGGCLFLHEHRTKEIKN 234 (254)
Q Consensus 160 ~g~L~~~~~~~~~~~~IW~l~~~~~W~~~~~i~~~~~~~~~~~~~~~g~i~l~~~~~~~~~~~~~yd~~t~~~~~ 234 (254)
+|.+.++. .....+.||-++. ..|.....+..-.....-+.+..++..++.... ++.+..||++++++..
T Consensus 19 ~~~~l~~~-~~d~~v~i~~~~~-~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~---dg~i~vwd~~~~~~~~ 88 (372)
T 1k8k_C 19 DRTQIAIC-PNNHEVHIYEKSG-NKWVQVHELKEHNGQVTGVDWAPDSNRIVTCGT---DRNAYVWTLKGRTWKP 88 (372)
T ss_dssp TSSEEEEE-CSSSEEEEEEEET-TEEEEEEEEECCSSCEEEEEEETTTTEEEEEET---TSCEEEEEEETTEEEE
T ss_pred CCCEEEEE-eCCCEEEEEeCCC-CcEEeeeeecCCCCcccEEEEeCCCCEEEEEcC---CCeEEEEECCCCeeee
Confidence 44444444 2367899999986 667676666532222334455567766555442 6789999998886543
No 32
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=63.92 E-value=60 Score=26.65 Aligned_cols=110 Identities=9% Similarity=0.060 Sum_probs=60.9
Q ss_pred ceEEEE-EEEEEEEecCCCceEEEEEECCCccee-EecCCCC-------CC-ceeEEEEeCCeEEEEecCCCCEEEEEEE
Q 039648 110 LDRYFK-VCYWLVIADTRDLKVILSFHMDNEVFE-EIKIPPH-------VN-YYSSISLYEDSLSIVIPDAEQCFEIWVM 179 (254)
Q Consensus 110 ~~v~~~-~lyWl~~~~~~~~~~IvsfD~~~e~~~-~i~~P~~-------~~-~~~~l~~~~g~L~~~~~~~~~~~~IW~l 179 (254)
.++..+ .+|-... ...|.++|.++.+.. ..+++.. .. ........+|.|.+... ...+..+-.
T Consensus 48 ~p~v~~~~v~~~~~-----~g~v~a~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~--~g~l~a~d~ 120 (376)
T 3q7m_A 48 HPALADNVVYAADR-----AGLVKALNADDGKEIWSVSLAEKDGWFSKEPALLSGGVTVSGGHVYIGSE--KAQVYALNT 120 (376)
T ss_dssp CCEEETTEEEEECT-----TSEEEEEETTTCCEEEEEECCC---CCSCCCCCEEEEEEEETTEEEEEET--TSEEEEEET
T ss_pred ccEEECCEEEEEcC-----CCeEEEEEccCCceeeeecCccccccccccCcccccCceEeCCEEEEEcC--CCEEEEEEC
Confidence 466666 7775432 137999999766432 2344321 11 23455667788777652 233333333
Q ss_pred CC-CcceEEEEEecCCCcceeeEEEEeCCeEEEEeCccccCCEEEEEECCCCcEEEE
Q 039648 180 ND-NKCWAKHLTLGPFFNFRINFGFWKNDAFFIESNSRIYGGCLFLHEHRTKEIKNL 235 (254)
Q Consensus 180 ~~-~~~W~~~~~i~~~~~~~~~~~~~~~g~i~l~~~~~~~~~~~~~yd~~t~~~~~~ 235 (254)
+. +..|... ++... ...|+ ..++.+++... +..+..+|.++++..+-
T Consensus 121 ~tG~~~W~~~--~~~~~-~~~p~--~~~~~v~v~~~----~g~l~~~d~~tG~~~W~ 168 (376)
T 3q7m_A 121 SDGTVAWQTK--VAGEA-LSRPV--VSDGLVLIHTS----NGQLQALNEADGAVKWT 168 (376)
T ss_dssp TTCCEEEEEE--CSSCC-CSCCE--EETTEEEEECT----TSEEEEEETTTCCEEEE
T ss_pred CCCCEEEEEe--CCCce-EcCCE--EECCEEEEEcC----CCeEEEEECCCCcEEEE
Confidence 33 4567553 22111 12232 23667777776 67899999998876543
No 33
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=60.14 E-value=70 Score=26.21 Aligned_cols=96 Identities=8% Similarity=0.042 Sum_probs=49.1
Q ss_pred EEEEEECCCccee-EecCCCCCCceeEEEEeCCeEEEEecCCCCEEEEEEECC-CcceEEEEEecCC--CcceeeEEEEe
Q 039648 130 VILSFHMDNEVFE-EIKIPPHVNYYSSISLYEDSLSIVIPDAEQCFEIWVMND-NKCWAKHLTLGPF--FNFRINFGFWK 205 (254)
Q Consensus 130 ~IvsfD~~~e~~~-~i~~P~~~~~~~~l~~~~g~L~~~~~~~~~~~~IW~l~~-~~~W~~~~~i~~~--~~~~~~~~~~~ 205 (254)
.|.++|.++++.. ..+++... .......+|.+.+... ...+..+-.+. +..|.....-+.. .....|. ..
T Consensus 114 ~l~a~d~~tG~~~W~~~~~~~~--~~~p~~~~~~v~v~~~--~g~l~~~d~~tG~~~W~~~~~~~~~~~~~~~~~~--~~ 187 (376)
T 3q7m_A 114 QVYALNTSDGTVAWQTKVAGEA--LSRPVVSDGLVLIHTS--NGQLQALNEADGAVKWTVNLDMPSLSLRGESAPT--TA 187 (376)
T ss_dssp EEEEEETTTCCEEEEEECSSCC--CSCCEEETTEEEEECT--TSEEEEEETTTCCEEEEEECCC-----CCCCCCE--EE
T ss_pred EEEEEECCCCCEEEEEeCCCce--EcCCEEECCEEEEEcC--CCeEEEEECCCCcEEEEEeCCCCceeecCCCCcE--EE
Confidence 7999999866432 33444322 1222334666555442 22233333223 4457654321111 0012222 22
Q ss_pred CCeEEEEeCccccCCEEEEEECCCCcEEEE
Q 039648 206 NDAFFIESNSRIYGGCLFLHEHRTKEIKNL 235 (254)
Q Consensus 206 ~g~i~l~~~~~~~~~~~~~yd~~t~~~~~~ 235 (254)
++.+++... +..+..+|+++++..+-
T Consensus 188 ~~~v~~g~~----~g~l~~~d~~tG~~~w~ 213 (376)
T 3q7m_A 188 FGAAVVGGD----NGRVSAVLMEQGQMIWQ 213 (376)
T ss_dssp TTEEEECCT----TTEEEEEETTTCCEEEE
T ss_pred CCEEEEEcC----CCEEEEEECCCCcEEEE
Confidence 566777665 67899999998877654
No 34
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=58.54 E-value=67 Score=25.46 Aligned_cols=190 Identities=9% Similarity=0.082 Sum_probs=97.6
Q ss_pred eccCceEEEEEcCCccEEEEcCcccccccCCCCCCCCCCCCCCCCcceEEEEeeCCCCCeEEEEEeeeeccccccCCCcC
Q 039648 11 GYHDGLFCIMQSSTNRLTIWNPATREFRNLPNYKYCNSSNRLIPPSTFICLESDPINNDFKLLFVHNLWNEKRKRYGKVP 90 (254)
Q Consensus 11 ~scnGLlcl~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~g~g~d~~~~~yKVv~~~~~~~~~~~~~~~~~ 90 (254)
....+.+.+.......+.+||+.|++....-..+. ... ++.++|..+ .++.... ...
T Consensus 6 ~~~~~~~~v~~~~~~~v~~~d~~~~~~~~~~~~~~----------~~~-~~~~s~dg~--~l~~~~~----------~~~ 62 (331)
T 3u4y_A 6 QTTSNFGIVVEQHLRRISFFSTDTLEILNQITLGY----------DFV-DTAITSDCS--NVVVTSD----------FCQ 62 (331)
T ss_dssp -CCCCEEEEEEGGGTEEEEEETTTCCEEEEEECCC----------CEE-EEEECSSSC--EEEEEES----------TTC
T ss_pred cCCCCEEEEEecCCCeEEEEeCcccceeeeEEccC----------Ccc-eEEEcCCCC--EEEEEeC----------CCC
Confidence 34455666666544457999999988754322211 122 677776554 2222211 122
Q ss_pred eEEEEEccCCce--eecccc--Cce-EEEE----EEEEEEEecCCCceEEEEEECCCccee-EecCCCCCCceeEEEEe-
Q 039648 91 NVQVYGFRTNSW--REVHGH--QLD-RYFK----VCYWLVIADTRDLKVILSFHMDNEVFE-EIKIPPHVNYYSSISLY- 159 (254)
Q Consensus 91 ~~~Vys~~~~~W--r~~~~~--p~~-v~~~----~lyWl~~~~~~~~~~IvsfD~~~e~~~-~i~~P~~~~~~~~l~~~- 159 (254)
.+.+++..++.- +.+... |.. +.++ .+| ..........|..+|+++.+.. .++.... ...+...
T Consensus 63 ~i~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~--~~~~~~~~~~i~v~d~~~~~~~~~~~~~~~---~~~~~~sp 137 (331)
T 3u4y_A 63 TLVQIETQLEPPKVVAIQEGQSSMADVDITPDDQFAV--TVTGLNHPFNMQSYSFLKNKFISTIPIPYD---AVGIAISP 137 (331)
T ss_dssp EEEEEECSSSSCEEEEEEECSSCCCCEEECTTSSEEE--ECCCSSSSCEEEEEETTTTEEEEEEECCTT---EEEEEECT
T ss_pred eEEEEECCCCceeEEecccCCCCccceEECCCCCEEE--EecCCCCcccEEEEECCCCCeEEEEECCCC---ccceEECC
Confidence 667777777653 222211 222 4333 344 2222111227889999877543 3343322 2333333
Q ss_pred CC-eEEEEecCCCCEEEEEEECCCcceEE--EEEecCCCcceeeEEEEeCCe-EEEEeCccccCCEEEEEECCCCcE
Q 039648 160 ED-SLSIVIPDAEQCFEIWVMNDNKCWAK--HLTLGPFFNFRINFGFWKNDA-FFIESNSRIYGGCLFLHEHRTKEI 232 (254)
Q Consensus 160 ~g-~L~~~~~~~~~~~~IW~l~~~~~W~~--~~~i~~~~~~~~~~~~~~~g~-i~l~~~~~~~~~~~~~yd~~t~~~ 232 (254)
+| .|.+........+.+|.++..+.-.. ...+.... ...-+.+..+|. +++.... +..+..||+++++.
T Consensus 138 dg~~l~~~~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~-~~~~~~~spdg~~l~v~~~~---~~~v~v~d~~~~~~ 210 (331)
T 3u4y_A 138 NGNGLILIDRSSANTVRRFKIDADGVLFDTGQEFISGGT-RPFNITFTPDGNFAFVANLI---GNSIGILETQNPEN 210 (331)
T ss_dssp TSSCEEEEEETTTTEEEEEEECTTCCEEEEEEEEECSSS-SEEEEEECTTSSEEEEEETT---TTEEEEEECSSTTS
T ss_pred CCCEEEEEecCCCceEEEEEECCCCcEeecCCccccCCC-CccceEECCCCCEEEEEeCC---CCeEEEEECCCCcc
Confidence 44 45555533233499999986222211 12222211 223355567786 5555542 67899999998774
No 35
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=58.26 E-value=73 Score=25.81 Aligned_cols=192 Identities=11% Similarity=0.124 Sum_probs=80.4
Q ss_pred ccCceEEEEEcCCccEEEEcCcccccccCCCCCCCCCCCCCCCCcceEEEEeeCCCCCeEEEEEeeeeccccccCCCcCe
Q 039648 12 YHDGLFCIMQSSTNRLTIWNPATREFRNLPNYKYCNSSNRLIPPSTFICLESDPINNDFKLLFVHNLWNEKRKRYGKVPN 91 (254)
Q Consensus 12 scnGLlcl~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~g~g~d~~~~~yKVv~~~~~~~~~~~~~~~~~~ 91 (254)
+-+|-++.....+..+.|||..++++..+-..... ......+.+.|..+ + ++... ..-.
T Consensus 20 s~~g~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~h--------~~~v~~~~~s~~~~-~-l~s~s-----------~d~~ 78 (377)
T 3dwl_C 20 NSQRTEFVTTTATNQVELYEQDGNGWKHARTFSDH--------DKIVTCVDWAPKSN-R-IVTCS-----------QDRN 78 (377)
T ss_dssp CSSSSEEECCCSSSCBCEEEEETTEEEECCCBCCC--------SSCEEEEEECTTTC-C-EEEEE-----------TTSS
T ss_pred CCCCCEEEEecCCCEEEEEEccCCceEEEEEEecC--------CceEEEEEEeCCCC-E-EEEEe-----------CCCe
Confidence 34554444432222369999998754333322211 12345566666532 2 22211 1125
Q ss_pred EEEEEccCCc-eeecccc---C---ceEEEE-EEEEEEEecCCCceEEEEEECCCcc----eeEecCCCCCCceeEEEEe
Q 039648 92 VQVYGFRTNS-WREVHGH---Q---LDRYFK-VCYWLVIADTRDLKVILSFHMDNEV----FEEIKIPPHVNYYSSISLY 159 (254)
Q Consensus 92 ~~Vys~~~~~-Wr~~~~~---p---~~v~~~-~lyWl~~~~~~~~~~IvsfD~~~e~----~~~i~~P~~~~~~~~l~~~ 159 (254)
+.|++..++. |+..... . ..+.++ .=..+..... ...|..+|+++++ ...+..|-.. .-..+.-.
T Consensus 79 v~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~--d~~i~iwd~~~~~~~~~~~~~~~~h~~-~v~~~~~~ 155 (377)
T 3dwl_C 79 AYVYEKRPDGTWKQTLVLLRLNRAATFVRWSPNEDKFAVGSG--ARVISVCYFEQENDWWVSKHLKRPLRS-TILSLDWH 155 (377)
T ss_dssp EEEC------CCCCEEECCCCSSCEEEEECCTTSSCCEEEES--SSCEEECCC-----CCCCEEECSSCCS-CEEEEEEC
T ss_pred EEEEEcCCCCceeeeeEecccCCceEEEEECCCCCEEEEEec--CCeEEEEEECCcccceeeeEeecccCC-CeEEEEEc
Confidence 6778777765 5443322 1 122111 0001111111 1246777887764 3444432211 12223322
Q ss_pred -CCeEEEEecCCCCEEEEEEECC--------Ccce-------EEEEEecCCCcceeeEEEEeCCeEEEEeCccccCCEEE
Q 039648 160 -EDSLSIVIPDAEQCFEIWVMND--------NKCW-------AKHLTLGPFFNFRINFGFWKNDAFFIESNSRIYGGCLF 223 (254)
Q Consensus 160 -~g~L~~~~~~~~~~~~IW~l~~--------~~~W-------~~~~~i~~~~~~~~~~~~~~~g~i~l~~~~~~~~~~~~ 223 (254)
+|.+.+... ....+.||-++. ...| .....+... ....-+.+..++..++.... ++.+.
T Consensus 156 ~~~~~l~~~~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~v~~~~~sp~~~~l~~~~~---d~~i~ 230 (377)
T 3dwl_C 156 PNNVLLAAGC-ADRKAYVLSAYVRDVDAKPEASVWGSRLPFNTVCAEYPSG-GWVHAVGFSPSGNALAYAGH---DSSVT 230 (377)
T ss_dssp TTSSEEEEEE-SSSCEEEEEECCSSCC-CCCSCSSCSCCCEEEEEECCCCS-SSEEEEEECTTSSCEEEEET---TTEEC
T ss_pred CCCCEEEEEe-CCCEEEEEEEEecccCCCccccccccccchhhhhhcccCC-ceEEEEEECCCCCEEEEEeC---CCcEE
Confidence 444444442 367899999963 1112 222222111 11233444557765554432 77888
Q ss_pred EEECCCCcE
Q 039648 224 LHEHRTKEI 232 (254)
Q Consensus 224 ~yd~~t~~~ 232 (254)
+||+++++.
T Consensus 231 iwd~~~~~~ 239 (377)
T 3dwl_C 231 IAYPSAPEQ 239 (377)
T ss_dssp -CEECSTTS
T ss_pred EEECCCCCC
Confidence 999887753
No 36
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=57.73 E-value=75 Score=25.75 Aligned_cols=139 Identities=10% Similarity=-0.008 Sum_probs=77.6
Q ss_pred eEEEEEccCCce-eecccc--CceEEE-E--EEEEEEEecCCCceEEEEEECCCccee-EecCCCCCC---ceeEEEEeC
Q 039648 91 NVQVYGFRTNSW-REVHGH--QLDRYF-K--VCYWLVIADTRDLKVILSFHMDNEVFE-EIKIPPHVN---YYSSISLYE 160 (254)
Q Consensus 91 ~~~Vys~~~~~W-r~~~~~--p~~v~~-~--~lyWl~~~~~~~~~~IvsfD~~~e~~~-~i~~P~~~~---~~~~l~~~~ 160 (254)
.+.|++..++.- +.+... |..+.+ . .+|.....+ ..|..+|+++.+.. .++.+.... ....+...+
T Consensus 65 ~v~viD~~t~~~~~~i~~~~~p~~i~~~~~g~lyv~~~~~----~~v~~iD~~t~~~~~~i~~g~~~~~~~~p~~i~~~~ 140 (328)
T 3dsm_A 65 VIFAIDINTFKEVGRITGFTSPRYIHFLSDEKAYVTQIWD----YRIFIINPKTYEITGYIECPDMDMESGSTEQMVQYG 140 (328)
T ss_dssp EEEEEETTTCCEEEEEECCSSEEEEEEEETTEEEEEEBSC----SEEEEEETTTTEEEEEEECTTCCTTTCBCCCEEEET
T ss_pred EEEEEECcccEEEEEcCCCCCCcEEEEeCCCeEEEEECCC----CeEEEEECCCCeEEEEEEcCCccccCCCcceEEEEC
Confidence 678888877653 334322 355555 3 665543222 37999999988764 566655110 112334478
Q ss_pred CeEEEEecCCCCEEEEEEECCCcceEEEEEecCCCcceeeEEEEeCCeEEEEeCcccc-------CCEEEEEECCCCcEE
Q 039648 161 DSLSIVIPDAEQCFEIWVMNDNKCWAKHLTLGPFFNFRINFGFWKNDAFFIESNSRIY-------GGCLFLHEHRTKEIK 233 (254)
Q Consensus 161 g~L~~~~~~~~~~~~IW~l~~~~~W~~~~~i~~~~~~~~~~~~~~~g~i~l~~~~~~~-------~~~~~~yd~~t~~~~ 233 (254)
++|.+........+.++-++. ....+. ++... ...-+.+..+|.+++....... ...+..+|++++++.
T Consensus 141 ~~lyv~~~~~~~~v~viD~~t-~~~~~~--i~~g~-~p~~i~~~~dG~l~v~~~~~~~~~~~~~~~~~v~~id~~t~~v~ 216 (328)
T 3dsm_A 141 KYVYVNCWSYQNRILKIDTET-DKVVDE--LTIGI-QPTSLVMDKYNKMWTITDGGYEGSPYGYEAPSLYRIDAETFTVE 216 (328)
T ss_dssp TEEEEEECTTCCEEEEEETTT-TEEEEE--EECSS-CBCCCEECTTSEEEEEBCCBCTTCSSCBCCCEEEEEETTTTEEE
T ss_pred CEEEEEcCCCCCEEEEEECCC-CeEEEE--EEcCC-CccceEEcCCCCEEEEECCCccCCccccCCceEEEEECCCCeEE
Confidence 888877632245555555553 333333 33211 1123445668888777652100 158999999988775
Q ss_pred -EEEE
Q 039648 234 -NLQV 237 (254)
Q Consensus 234 -~~~~ 237 (254)
.+.+
T Consensus 217 ~~~~~ 221 (328)
T 3dsm_A 217 KQFKF 221 (328)
T ss_dssp EEEEC
T ss_pred EEEec
Confidence 4454
No 37
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=57.38 E-value=82 Score=26.08 Aligned_cols=187 Identities=9% Similarity=0.057 Sum_probs=88.2
Q ss_pred CceEEEEEcCCccEEEEcCcccccccCCCCCCCCCCCCCCCCcceEEEEeeCCCCCeEEEEEeeeeccccccCCCcCeEE
Q 039648 14 DGLFCIMQSSTNRLTIWNPATREFRNLPNYKYCNSSNRLIPPSTFICLESDPINNDFKLLFVHNLWNEKRKRYGKVPNVQ 93 (254)
Q Consensus 14 nGLlcl~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~g~g~d~~~~~yKVv~~~~~~~~~~~~~~~~~~~~ 93 (254)
+.++....+. .+.|||..|++...+-.... ......+.+.|.. .+ +.... ..-.+.
T Consensus 104 ~~l~~~~~d~--~v~lw~~~~~~~~~~~~~~~---------~~~v~~v~~s~~~-~~--l~~~~----------~dg~i~ 159 (401)
T 4aez_A 104 LNVVAVALER--NVYVWNADSGSVSALAETDE---------STYVASVKWSHDG-SF--LSVGL----------GNGLVD 159 (401)
T ss_dssp TSEEEEEETT--EEEEEETTTCCEEEEEECCT---------TCCEEEEEECTTS-SE--EEEEE----------TTSCEE
T ss_pred CCEEEEECCC--eEEEeeCCCCcEeEeeecCC---------CCCEEEEEECCCC-CE--EEEEC----------CCCeEE
Confidence 4444433333 46999999988765543211 1234566676633 22 22211 112678
Q ss_pred EEEccCCce-eecccc--C-ceEEEE-EEEEEEEecCCCceEEEEEECCCcceeEecCCCCCCceeEEEEe-CCeEEEEe
Q 039648 94 VYGFRTNSW-REVHGH--Q-LDRYFK-VCYWLVIADTRDLKVILSFHMDNEVFEEIKIPPHVNYYSSISLY-EDSLSIVI 167 (254)
Q Consensus 94 Vys~~~~~W-r~~~~~--p-~~v~~~-~lyWl~~~~~~~~~~IvsfD~~~e~~~~i~~P~~~~~~~~l~~~-~g~L~~~~ 167 (254)
|++..++.- +.+... + ..+..+ .+-.....+ ..|..+|+....-....+......-..+.-. +|.+.+++
T Consensus 160 iwd~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~d----g~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~ 235 (401)
T 4aez_A 160 IYDVESQTKLRTMAGHQARVGCLSWNRHVLSSGSRS----GAIHHHDVRIANHQIGTLQGHSSEVCGLAWRSDGLQLASG 235 (401)
T ss_dssp EEETTTCCEEEEECCCSSCEEEEEEETTEEEEEETT----SEEEEEETTSSSCEEEEEECCSSCEEEEEECTTSSEEEEE
T ss_pred EEECcCCeEEEEecCCCCceEEEEECCCEEEEEcCC----CCEEEEecccCcceeeEEcCCCCCeeEEEEcCCCCEEEEE
Confidence 888877542 222222 1 344445 322222222 3688899874322221111111111223222 45444444
Q ss_pred cCCCCEEEEEEECCCcceEEEEEecCCCcceeeEEEEeCC-eEEEEeCccccCCEEEEEECCCCcEE
Q 039648 168 PDAEQCFEIWVMNDNKCWAKHLTLGPFFNFRINFGFWKND-AFFIESNSRIYGGCLFLHEHRTKEIK 233 (254)
Q Consensus 168 ~~~~~~~~IW~l~~~~~W~~~~~i~~~~~~~~~~~~~~~g-~i~l~~~~~~~~~~~~~yd~~t~~~~ 233 (254)
.....+.||-++. .. ....+........-+.+..++ .++....+ ..++.+..||+++++..
T Consensus 236 -~~d~~v~iwd~~~-~~--~~~~~~~~~~~v~~~~~~p~~~~ll~~~~g-s~d~~i~i~d~~~~~~~ 297 (401)
T 4aez_A 236 -GNDNVVQIWDARS-SI--PKFTKTNHNAAVKAVAWCPWQSNLLATGGG-TMDKQIHFWNAATGARV 297 (401)
T ss_dssp -ETTSCEEEEETTC-SS--EEEEECCCSSCCCEEEECTTSTTEEEEECC-TTTCEEEEEETTTCCEE
T ss_pred -eCCCeEEEccCCC-CC--ccEEecCCcceEEEEEECCCCCCEEEEecC-CCCCEEEEEECCCCCEE
Confidence 2367899999886 11 222232211122334444444 34444320 01678889998877543
No 38
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=55.98 E-value=89 Score=26.09 Aligned_cols=87 Identities=11% Similarity=0.198 Sum_probs=48.8
Q ss_pred ceeEecCCCCCC-ceeEE-EEe-CCeEEEEecCCCCEEEEEEECCCcceEEEEEecCCCcceeeEEEEeCCeEEEEeCcc
Q 039648 140 VFEEIKIPPHVN-YYSSI-SLY-EDSLSIVIPDAEQCFEIWVMNDNKCWAKHLTLGPFFNFRINFGFWKNDAFFIESNSR 216 (254)
Q Consensus 140 ~~~~i~~P~~~~-~~~~l-~~~-~g~L~~~~~~~~~~~~IW~l~~~~~W~~~~~i~~~~~~~~~~~~~~~g~i~l~~~~~ 216 (254)
-++.+..|.... .+..+ .-. ++.|++.. ...+.||-++. +.-.+...+..-.....-+.+..+|..++....
T Consensus 93 p~~~l~ap~~~~d~y~~~l~wS~~n~lAvgl---d~tV~lWd~~t-g~~~~~~~~~~~~~~V~sv~fspdg~~lasgs~- 167 (420)
T 4gga_A 93 PDRILDAPEIRNDYYLNLVDWSSGNVLAVAL---DNSVYLWSASS-GDILQLLQMEQPGEYISSVAWIKEGNYLAVGTS- 167 (420)
T ss_dssp CSEEEECTTCCCCTTCBCEEECTTSEEEEEE---TTEEEEEETTT-CCEEEEEECCSTTCCEEEEEECTTSSEEEEEET-
T ss_pred CceEEECCCCcccccceeEEECCCCEEEEEe---CCEEEEEECCC-CCEEEEEEecCCCCcEEEEEECCCCCEEEEEEC-
Confidence 345566666543 22222 222 44444433 57899998875 555555554321212334555667776655442
Q ss_pred ccCCEEEEEECCCCcEE
Q 039648 217 IYGGCLFLHEHRTKEIK 233 (254)
Q Consensus 217 ~~~~~~~~yd~~t~~~~ 233 (254)
++.+.+||+++++..
T Consensus 168 --Dg~v~iWd~~~~~~~ 182 (420)
T 4gga_A 168 --SAEVQLWDVQQQKRL 182 (420)
T ss_dssp --TSCEEEEETTTTEEE
T ss_pred --CCeEEEEEcCCCcEE
Confidence 778899999887543
No 39
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=55.78 E-value=71 Score=24.99 Aligned_cols=68 Identities=6% Similarity=0.093 Sum_probs=40.0
Q ss_pred CCeEEEEecCCCCEEEEEEECC-CcceEEEEEecCCCcceeeEEEEe--CCeEEEEeCccccCCEEEEEECCCCc
Q 039648 160 EDSLSIVIPDAEQCFEIWVMND-NKCWAKHLTLGPFFNFRINFGFWK--NDAFFIESNSRIYGGCLFLHEHRTKE 231 (254)
Q Consensus 160 ~g~L~~~~~~~~~~~~IW~l~~-~~~W~~~~~i~~~~~~~~~~~~~~--~g~i~l~~~~~~~~~~~~~yd~~t~~ 231 (254)
+|.+.+.+ .....+.||-++. ...+.....+..-.....-+.+.. ++.+++.... ++.+.+||+++++
T Consensus 22 ~~~~l~~~-~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~d~~~l~s~~~---dg~v~vwd~~~~~ 92 (351)
T 3f3f_A 22 YGRHVATC-SSDQHIKVFKLDKDTSNWELSDSWRAHDSSIVAIDWASPEYGRIIASASY---DKTVKLWEEDPDQ 92 (351)
T ss_dssp SSSEEEEE-ETTSEEEEEEECSSSCCEEEEEEEECCSSCEEEEEECCGGGCSEEEEEET---TSCEEEEEECTTS
T ss_pred CCCEEEEe-eCCCeEEEEECCCCCCcceecceeccCCCcEEEEEEcCCCCCCEEEEEcC---CCeEEEEecCCCc
Confidence 34433333 2467899999997 566666665542221223334444 4666555442 6789999998753
No 40
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=54.46 E-value=91 Score=25.77 Aligned_cols=98 Identities=8% Similarity=0.041 Sum_probs=55.0
Q ss_pred eEEEEEECCCcce-eEecCCCCCCceeEEEEe-CCeEEEE-ecCCCCEEEEEEECCCcceEEEEEecCCCcceeeEEEEe
Q 039648 129 KVILSFHMDNEVF-EEIKIPPHVNYYSSISLY-EDSLSIV-IPDAEQCFEIWVMNDNKCWAKHLTLGPFFNFRINFGFWK 205 (254)
Q Consensus 129 ~~IvsfD~~~e~~-~~i~~P~~~~~~~~l~~~-~g~L~~~-~~~~~~~~~IW~l~~~~~W~~~~~i~~~~~~~~~~~~~~ 205 (254)
..|..+|+.+.+. ..+..+.. ...+.-. +|...++ .......+.||.++. ....+...+..-.....-+.+..
T Consensus 284 ~~i~i~d~~~~~~~~~~~~~~~---v~~~~~s~~~~~l~~~~g~~dg~i~v~~~~~-~~~~~~~~~~~h~~~v~~~~~s~ 359 (401)
T 4aez_A 284 KQIHFWNAATGARVNTVDAGSQ---VTSLIWSPHSKEIMSTHGFPDNNLSIWSYSS-SGLTKQVDIPAHDTRVLYSALSP 359 (401)
T ss_dssp CEEEEEETTTCCEEEEEECSSC---EEEEEECSSSSEEEEEECTTTCEEEEEEEET-TEEEEEEEEECCSSCCCEEEECT
T ss_pred CEEEEEECCCCCEEEEEeCCCc---EEEEEECCCCCeEEEEeecCCCcEEEEecCC-ccceeEEEecCCCCCEEEEEECC
Confidence 4688889887644 33333221 1222222 4444444 344578999999986 55566655542221223345566
Q ss_pred CCeEEEEeCccccCCEEEEEECCCCcEE
Q 039648 206 NDAFFIESNSRIYGGCLFLHEHRTKEIK 233 (254)
Q Consensus 206 ~g~i~l~~~~~~~~~~~~~yd~~t~~~~ 233 (254)
+|..++.... ++.+..||+.+++..
T Consensus 360 dg~~l~s~~~---dg~i~iw~~~~~~~~ 384 (401)
T 4aez_A 360 DGRILSTAAS---DENLKFWRVYDGDHV 384 (401)
T ss_dssp TSSEEEEECT---TSEEEEEECCC----
T ss_pred CCCEEEEEeC---CCcEEEEECCCCccc
Confidence 7776666552 788999999987643
No 41
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=52.95 E-value=1.4e+02 Score=27.52 Aligned_cols=105 Identities=12% Similarity=0.082 Sum_probs=0.0
Q ss_pred EEEEecCCCceEEEEEECCCcceeEecCCCCCC-ceeEEEEe-CCeEEEEecCCCCEEEEEEECCCcceEEEEEec---C
Q 039648 119 WLVIADTRDLKVILSFHMDNEVFEEIKIPPHVN-YYSSISLY-EDSLSIVIPDAEQCFEIWVMNDNKCWAKHLTLG---P 193 (254)
Q Consensus 119 Wl~~~~~~~~~~IvsfD~~~e~~~~i~~P~~~~-~~~~l~~~-~g~L~~~~~~~~~~~~IW~l~~~~~W~~~~~i~---~ 193 (254)
|+..... .|..+|..+++|+.+..+.... .-..+.+. +|.|.+.. ...+..+-.+. ..|......+ .
T Consensus 421 Wigt~~~----Gl~~~~~~~~~~~~~~~~~~~~~~v~~i~~d~~g~lwigt---~~Gl~~~~~~~-~~~~~~~~~~~~~~ 492 (781)
T 3v9f_A 421 WFGTYLG----NISYYNTRLKKFQIIELEKNELLDVRVFYEDKNKKIWIGT---HAGVFVIDLAS-KKVIHHYDTSNSQL 492 (781)
T ss_dssp EEEETTE----EEEEECSSSCEEEECCSTTTCCCCEEEEEECTTSEEEEEE---TTEEEEEESSS-SSCCEEECTTTSSC
T ss_pred EEEeccC----CEEEEcCCCCcEEEeccCCCCCCeEEEEEECCCCCEEEEE---CCceEEEeCCC-CeEEecccCccccc
Q ss_pred CCcceeeEEEEeCCeEEEEeCccccCCEEEEEECCCCcEEEE
Q 039648 194 FFNFRINFGFWKNDAFFIESNSRIYGGCLFLHEHRTKEIKNL 235 (254)
Q Consensus 194 ~~~~~~~~~~~~~g~i~l~~~~~~~~~~~~~yd~~t~~~~~~ 235 (254)
......-+....+|.|.+.+. +..+..||+++++++.+
T Consensus 493 ~~~~i~~i~~d~~g~lWigt~----~~Gl~~~~~~~~~~~~~ 530 (781)
T 3v9f_A 493 LENFVRSIAQDSEGRFWIGTF----GGGVGIYTPDMQLVRKF 530 (781)
T ss_dssp SCSCEEEEEECTTCCEEEEES----SSCEEEECTTCCEEEEE
T ss_pred ccceeEEEEEcCCCCEEEEEc----CCCEEEEeCCCCeEEEc
No 42
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=51.81 E-value=91 Score=24.97 Aligned_cols=74 Identities=9% Similarity=0.110 Sum_probs=46.0
Q ss_pred CCe-EEEEecCCCCEEEEEEECCCcceEEEEEecCCCcceeeEEEEeCCe-EEEEeCccccCCEEEEE--ECCCCcEEEE
Q 039648 160 EDS-LSIVIPDAEQCFEIWVMNDNKCWAKHLTLGPFFNFRINFGFWKNDA-FFIESNSRIYGGCLFLH--EHRTKEIKNL 235 (254)
Q Consensus 160 ~g~-L~~~~~~~~~~~~IW~l~~~~~W~~~~~i~~~~~~~~~~~~~~~g~-i~l~~~~~~~~~~~~~y--d~~t~~~~~~ 235 (254)
+|+ |++.. .....+.+|.++..+.+..+..++.......-+.+..+|. |+..... +..+.+| |.++++++.+
T Consensus 250 dG~~l~v~~-~~~~~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~---~~~v~v~~~d~~tg~l~~~ 325 (347)
T 3hfq_A 250 DGHFLYVSN-RGYNTLAVFAVTADGHLTLIQQISTEGDFPRDFDLDPTEAFVVVVNQN---TDNATLYARDLTSGKLSLL 325 (347)
T ss_dssp TSCEEEEEE-ETTTEEEEEEECGGGCEEEEEEEECSSSCCCEEEECTTSSEEEEEETT---TTEEEEEEECTTTCCEEEE
T ss_pred CCCEEEEEe-CCCCEEEEEEECCCCcEEEeEEEecCCCCcCeEEECCCCCEEEEEEcC---CCcEEEEEEeCCCCeEEec
Confidence 555 44444 3467899999985345666666653221234456677887 4444431 4677777 8888999876
Q ss_pred EE
Q 039648 236 QV 237 (254)
Q Consensus 236 ~~ 237 (254)
.-
T Consensus 326 ~~ 327 (347)
T 3hfq_A 326 QK 327 (347)
T ss_dssp EE
T ss_pred cc
Confidence 43
No 43
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=49.38 E-value=96 Score=24.52 Aligned_cols=192 Identities=7% Similarity=0.084 Sum_probs=96.2
Q ss_pred ccCceEEEEEcCCccEEEEcCcccccccCCCCCCCCCCCCCCCCcceEEEEeeCCCCCeEEEEEeeeeccccccCCCcCe
Q 039648 12 YHDGLFCIMQSSTNRLTIWNPATREFRNLPNYKYCNSSNRLIPPSTFICLESDPINNDFKLLFVHNLWNEKRKRYGKVPN 91 (254)
Q Consensus 12 scnGLlcl~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~g~g~d~~~~~yKVv~~~~~~~~~~~~~~~~~~ 91 (254)
.-+|-|...+....+++.++|.|++...+..+. ...++++++..+ ++. .. ...
T Consensus 22 ~~~~~l~~~d~~~~~i~~~d~~~~~~~~~~~~~------------~~~~i~~~~dG~---l~v-~~-----------~~~ 74 (297)
T 3g4e_A 22 EVSNSLLFVDIPAKKVCRWDSFTKQVQRVTMDA------------PVSSVALRQSGG---YVA-TI-----------GTK 74 (297)
T ss_dssp TTTTEEEEEETTTTEEEEEETTTCCEEEEECSS------------CEEEEEEBTTSS---EEE-EE-----------TTE
T ss_pred CCCCEEEEEECCCCEEEEEECCCCcEEEEeCCC------------ceEEEEECCCCC---EEE-EE-----------CCe
Confidence 335655555554456799999998876543321 234666776544 222 11 114
Q ss_pred EEEEEccCCceeecccc----C----ceEEEE---EEEEEEEecC--------CCceEEEEEECCCcceeEecCCCCCCc
Q 039648 92 VQVYGFRTNSWREVHGH----Q----LDRYFK---VCYWLVIADT--------RDLKVILSFHMDNEVFEEIKIPPHVNY 152 (254)
Q Consensus 92 ~~Vys~~~~~Wr~~~~~----p----~~v~~~---~lyWl~~~~~--------~~~~~IvsfD~~~e~~~~i~~P~~~~~ 152 (254)
+.+|+..++.++.+... + ..+.++ .+ |++.... .....|..+|.+.+.-.... ....
T Consensus 75 l~~~d~~~g~~~~~~~~~~~~~~~~~~di~~d~dG~l-~~~~~~~~~~~~~~~~~~~~l~~~d~~g~~~~~~~---~~~~ 150 (297)
T 3g4e_A 75 FCALNWKEQSAVVLATVDNDKKNNRFNDGKVDPAGRY-FAGTMAEETAPAVLERHQGALYSLFPDHHVKKYFD---QVDI 150 (297)
T ss_dssp EEEEETTTTEEEEEEECCTTCSSEEEEEEEECTTSCE-EEEEEECCSBTTBCCTTCEEEEEECTTSCEEEEEE---EESB
T ss_pred EEEEECCCCcEEEEEecCCCCCCCCCCCEEECCCCCE-EEecCCcccccccccCCCcEEEEEECCCCEEEEee---cccc
Confidence 56677777766554322 1 234343 43 4443221 12347888887643222111 0001
Q ss_pred eeEEEEe-CC-eEEEEecCCCCEEEEEEEC-CCcceEEEEEecCC-Ccceee--EEEEeCCeEEEEeCccccCCEEEEEE
Q 039648 153 YSSISLY-ED-SLSIVIPDAEQCFEIWVMN-DNKCWAKHLTLGPF-FNFRIN--FGFWKNDAFFIESNSRIYGGCLFLHE 226 (254)
Q Consensus 153 ~~~l~~~-~g-~L~~~~~~~~~~~~IW~l~-~~~~W~~~~~i~~~-~~~~~~--~~~~~~g~i~l~~~~~~~~~~~~~yd 226 (254)
...+... +| .|.++. .....+.+|-++ +.........+-.. .....| +.+..+|.|++.... ...+..||
T Consensus 151 pngi~~spdg~~lyv~~-~~~~~i~~~~~d~~~G~~~~~~~~~~~~~~~~~p~g~~~d~~G~lwva~~~---~~~v~~~d 226 (297)
T 3g4e_A 151 SNGLDWSLDHKIFYYID-SLSYSVDAFDYDLQTGQISNRRSVYKLEKEEQIPDGMCIDAEGKLWVACYN---GGRVIRLD 226 (297)
T ss_dssp EEEEEECTTSCEEEEEE-GGGTEEEEEEECTTTCCEEEEEEEEECCGGGCEEEEEEEBTTSCEEEEEET---TTEEEEEC
T ss_pred ccceEEcCCCCEEEEec-CCCCcEEEEeccCCCCcccCcEEEEECCCCCCCCCeeEECCCCCEEEEEcC---CCEEEEEc
Confidence 1223333 34 455555 334566666664 23333322111111 111244 344567888887652 56799999
Q ss_pred CCCCc-EEEEEEc
Q 039648 227 HRTKE-IKNLQVT 238 (254)
Q Consensus 227 ~~t~~-~~~~~~~ 238 (254)
+++++ +..+...
T Consensus 227 ~~tG~~~~~i~~p 239 (297)
T 3g4e_A 227 PVTGKRLQTVKLP 239 (297)
T ss_dssp TTTCCEEEEEECS
T ss_pred CCCceEEEEEECC
Confidence 99665 4555554
No 44
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=47.55 E-value=1.9e+02 Score=27.30 Aligned_cols=152 Identities=14% Similarity=0.088 Sum_probs=81.4
Q ss_pred eEEEEeeCCCCCeEEEEEeeeeccccccCCCcCeEEEEEccCCceeecccc----CceEEEE----EEEEEEEecCCCce
Q 039648 58 FICLESDPINNDFKLLFVHNLWNEKRKRYGKVPNVQVYGFRTNSWREVHGH----QLDRYFK----VCYWLVIADTRDLK 129 (254)
Q Consensus 58 ~~g~g~d~~~~~yKVv~~~~~~~~~~~~~~~~~~~~Vys~~~~~Wr~~~~~----p~~v~~~----~lyWl~~~~~~~~~ 129 (254)
-.|+++|...+ +|+... .....++++++....-+.+... |.++.++ .|||..... ..
T Consensus 473 P~GLAvD~~~~--~LY~tD----------~~~~~I~v~~ldG~~~~~l~~~~l~~P~gIaVDp~~g~LYwtD~g~---~~ 537 (791)
T 3m0c_C 473 PDGLAVDWIHS--NIYWTD----------SVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGT---PA 537 (791)
T ss_dssp CCEEEEETTTT--EEEEEE----------TTTTEEEEEETTSSSEEEEEECTTCCEEEEEEETTTTEEEEEECSS---SC
T ss_pred cceeeeeecCC--cEEEEe----------cCCCeEEEEeCCCCeEEEEEeCCCCCcceEEEecCCCCEEEecCCC---CC
Confidence 35778887654 233321 1223667777765544443221 4677775 699975432 24
Q ss_pred EEEEEECCCcceeEecCCCCCCceeEEEE--eCCeEEEEecCCCCEEEEEEECCCcceEEEEEecCCCcceeeEEEEe-C
Q 039648 130 VILSFHMDNEVFEEIKIPPHVNYYSSISL--YEDSLSIVIPDAEQCFEIWVMNDNKCWAKHLTLGPFFNFRINFGFWK-N 206 (254)
Q Consensus 130 ~IvsfD~~~e~~~~i~~P~~~~~~~~l~~--~~g~L~~~~~~~~~~~~IW~l~~~~~W~~~~~i~~~~~~~~~~~~~~-~ 206 (254)
.|..++++...-+.+- ......-..|+. .+|+|+++.. ... .||+.+-++.-.+.. +........|+++.- +
T Consensus 538 ~I~~~~~dG~~~~~lv-~~~l~~P~GLavD~~~~~LYwaD~-~~~--~I~~~d~dG~~~~~v-~~~~~~l~~P~glav~~ 612 (791)
T 3m0c_C 538 KIKKGGLNGVDIYSLV-TENIQWPNGITLDLLSGRLYWVDS-KLH--SISSIDVNGGNRKTI-LEDEKRLAHPFSLAVFE 612 (791)
T ss_dssp EEEEEETTSCCEEEEE-CSSCSCEEEEEEETTTTEEEEEET-TTT--EEEEEETTSCSCEEE-EECTTTTSSEEEEEEET
T ss_pred eEEEEecCCCceEEEE-eCCCCCceEEEEecCCCeEEEEeC-CCC--cEEEEecCCCceEEE-ecCCCccCCCCEEEEeC
Confidence 7999999876544442 112111233443 4788888873 233 456655412211111 111112456777653 4
Q ss_pred CeEEEEeCccccCCEEEEEECCCCcE
Q 039648 207 DAFFIESNSRIYGGCLFLHEHRTKEI 232 (254)
Q Consensus 207 g~i~l~~~~~~~~~~~~~yd~~t~~~ 232 (254)
+.|++.... ...+...|..+++-
T Consensus 613 ~~lYwtD~~---~~~I~~~dk~tG~~ 635 (791)
T 3m0c_C 613 DKVFWTDII---NEAIFSANRLTGSD 635 (791)
T ss_dssp TEEEEEETT---TTEEEEEETTTCCC
T ss_pred CEEEEEECC---CCEEEEEeCCCCcc
Confidence 567776653 67888999776643
No 45
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=46.98 E-value=1.1e+02 Score=24.73 Aligned_cols=182 Identities=9% Similarity=0.066 Sum_probs=92.5
Q ss_pred ceEEEEEcCCccEEEEcCcccccccCCCCCCCCCCCCCCCCcceEEEEeeCCCCCeEEEEEeeeeccccccCCCcCeEEE
Q 039648 15 GLFCIMQSSTNRLTIWNPATREFRNLPNYKYCNSSNRLIPPSTFICLESDPINNDFKLLFVHNLWNEKRKRYGKVPNVQV 94 (254)
Q Consensus 15 GLlcl~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~g~g~d~~~~~yKVv~~~~~~~~~~~~~~~~~~~~V 94 (254)
+.+++....+..+.|||..|++....-... ....++.+++..+ .++.... ..-.+.+
T Consensus 2 ~~l~vs~~~d~~v~v~d~~~~~~~~~~~~~-----------~~~~~~~~s~dg~--~l~~~~~----------~d~~i~v 58 (391)
T 1l0q_A 2 TFAYIANSESDNISVIDVTSNKVTATIPVG-----------SNPMGAVISPDGT--KVYVANA----------HSNDVSI 58 (391)
T ss_dssp EEEEEEETTTTEEEEEETTTTEEEEEEECS-----------SSEEEEEECTTSS--EEEEEEG----------GGTEEEE
T ss_pred CEEEEEcCCCCEEEEEECCCCeEEEEeecC-----------CCcceEEECCCCC--EEEEECC----------CCCeEEE
Confidence 345555554445799999998765432111 1234566665443 2222211 1236778
Q ss_pred EEccCCceee-cccc-C-ceEEEE----EEEEEEEecCCCceEEEEEECCCcceeE-ecCCCCCCceeEEEEe-CCe-EE
Q 039648 95 YGFRTNSWRE-VHGH-Q-LDRYFK----VCYWLVIADTRDLKVILSFHMDNEVFEE-IKIPPHVNYYSSISLY-EDS-LS 164 (254)
Q Consensus 95 ys~~~~~Wr~-~~~~-p-~~v~~~----~lyWl~~~~~~~~~~IvsfD~~~e~~~~-i~~P~~~~~~~~l~~~-~g~-L~ 164 (254)
++..++.-.. +... + ..+.+. .++.. ... ...|..+|+++.+... +.... ....+... +|. |.
T Consensus 59 ~d~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~-~~~---~~~v~v~d~~~~~~~~~~~~~~---~~~~~~~s~dg~~l~ 131 (391)
T 1l0q_A 59 IDTATNNVIATVPAGSSPQGVAVSPDGKQVYVT-NMA---SSTLSVIDTTSNTVAGTVKTGK---SPLGLALSPDGKKLY 131 (391)
T ss_dssp EETTTTEEEEEEECSSSEEEEEECTTSSEEEEE-ETT---TTEEEEEETTTTEEEEEEECSS---SEEEEEECTTSSEEE
T ss_pred EECCCCeEEEEEECCCCccceEECCCCCEEEEE-ECC---CCEEEEEECCCCeEEEEEeCCC---CcceEEECCCCCEEE
Confidence 8887764322 1111 1 233222 23322 211 1368889998775533 33322 12233333 444 44
Q ss_pred EEecCCCCEEEEEEECCCcceEEEEEecCCCcceeeEEEEeCCeEE-EEeCccccCCEEEEEECCCCcEEE
Q 039648 165 IVIPDAEQCFEIWVMNDNKCWAKHLTLGPFFNFRINFGFWKNDAFF-IESNSRIYGGCLFLHEHRTKEIKN 234 (254)
Q Consensus 165 ~~~~~~~~~~~IW~l~~~~~W~~~~~i~~~~~~~~~~~~~~~g~i~-l~~~~~~~~~~~~~yd~~t~~~~~ 234 (254)
+.. .....+.+|-++. .......... . ....+.+..+|..+ +.... +..+..||+++++...
T Consensus 132 ~~~-~~~~~v~~~d~~~-~~~~~~~~~~--~-~~~~~~~~~dg~~l~~~~~~---~~~v~~~d~~~~~~~~ 194 (391)
T 1l0q_A 132 VTN-NGDKTVSVINTVT-KAVINTVSVG--R-SPKGIAVTPDGTKVYVANFD---SMSISVIDTVTNSVID 194 (391)
T ss_dssp EEE-TTTTEEEEEETTT-TEEEEEEECC--S-SEEEEEECTTSSEEEEEETT---TTEEEEEETTTTEEEE
T ss_pred EEe-CCCCEEEEEECCC-CcEEEEEecC--C-CcceEEECCCCCEEEEEeCC---CCEEEEEECCCCeEEE
Confidence 444 4467899998875 3333332222 1 12344555667544 44442 6789999999886543
No 46
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=45.95 E-value=1.1e+02 Score=24.23 Aligned_cols=70 Identities=4% Similarity=0.004 Sum_probs=39.9
Q ss_pred CeEEEEecCCCCEEEEEEECCCcceEEEEEecCCCcceeeEEEEeCCeEEEEeCccccCCEEEEEECCCCcEEEE
Q 039648 161 DSLSIVIPDAEQCFEIWVMNDNKCWAKHLTLGPFFNFRINFGFWKNDAFFIESNSRIYGGCLFLHEHRTKEIKNL 235 (254)
Q Consensus 161 g~L~~~~~~~~~~~~IW~l~~~~~W~~~~~i~~~~~~~~~~~~~~~g~i~l~~~~~~~~~~~~~yd~~t~~~~~~ 235 (254)
|.+.+.+. ....+.||-++. ........+..-..-..-+.+..++..++.... ++.+.+||+++++...+
T Consensus 54 g~~l~~~~-~dg~i~iw~~~~-~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~---dg~v~iwd~~~~~~~~~ 123 (368)
T 3mmy_A 54 GNFLIAGS-WANDVRCWEVQD-SGQTIPKAQQMHTGPVLDVCWSDDGSKVFTASC---DKTAKMWDLSSNQAIQI 123 (368)
T ss_dssp SEEEEEEE-TTSEEEEEEECT-TSCEEEEEEEECSSCEEEEEECTTSSEEEEEET---TSEEEEEETTTTEEEEE
T ss_pred ceEEEEEC-CCCcEEEEEcCC-CCceeEEEeccccCCEEEEEECcCCCEEEEEcC---CCcEEEEEcCCCCceee
Confidence 45555553 367899999986 122221222211112233445557766555442 77899999998876654
No 47
>1evh_A WH1 domain, protein (MENA EVH1 domain); molecular recognition, actin dynamics, contractIle protein; 1.80A {Mus musculus} SCOP: b.55.1.4 PDB: 2xqn_M 2iyb_A
Probab=45.90 E-value=31 Score=23.92 Aligned_cols=41 Identities=12% Similarity=0.223 Sum_probs=29.5
Q ss_pred cEEEEcCcccccccCCCCCCCCCCCCCCCCcceEEEEeeCCCCCeEEEEEe
Q 039648 26 RLTIWNPATREFRNLPNYKYCNSSNRLIPPSTFICLESDPINNDFKLLFVH 76 (254)
Q Consensus 26 ~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~g~g~d~~~~~yKVv~~~ 76 (254)
.+++.+|.|++| +|..... -...+.|..|+..+.|+|+...
T Consensus 12 ~V~~~d~~~~~W--~p~~~~~--------g~s~V~~~~d~~~~~yrIv~~~ 52 (112)
T 1evh_A 12 AVMVYDDANKKW--VPAGGST--------GFSRVHIYHHTGNNTFRVVGRK 52 (112)
T ss_dssp EEEEEETTTTEE--EEGGGCC--------SCEEEEEEEETTTTEEEEEEEE
T ss_pred EEEEEcCCCCce--EECCCCC--------CceEEEEEEECCCCEEEEEEEE
Confidence 468999999966 4543211 1245788999999999999874
No 48
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=45.77 E-value=1.1e+02 Score=24.22 Aligned_cols=29 Identities=10% Similarity=0.178 Sum_probs=19.2
Q ss_pred EEEEeCCeEEEEeCccccCCEEEEEECCCCcE
Q 039648 201 FGFWKNDAFFIESNSRIYGGCLFLHEHRTKEI 232 (254)
Q Consensus 201 ~~~~~~g~i~l~~~~~~~~~~~~~yd~~t~~~ 232 (254)
+.+..++..++.... ++.+.+||+++++.
T Consensus 279 ~~~sp~~~~l~s~~~---dg~i~iwd~~~~~~ 307 (368)
T 3mmy_A 279 IAFHPVHGTLATVGS---DGRFSFWDKDARTK 307 (368)
T ss_dssp EEECTTTCCEEEEET---TSCEEEEETTTTEE
T ss_pred EEEecCCCEEEEEcc---CCeEEEEECCCCcE
Confidence 344556765555442 77899999997754
No 49
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=45.62 E-value=1.8e+02 Score=26.62 Aligned_cols=140 Identities=9% Similarity=0.000 Sum_probs=75.4
Q ss_pred eEEEEEccCC--c-eeeccccC----ceEEEE--EEEEEEEecCCCceEEEEEECCC--cceeEecCCCCCCceeEEEEe
Q 039648 91 NVQVYGFRTN--S-WREVHGHQ----LDRYFK--VCYWLVIADTRDLKVILSFHMDN--EVFEEIKIPPHVNYYSSISLY 159 (254)
Q Consensus 91 ~~~Vys~~~~--~-Wr~~~~~p----~~v~~~--~lyWl~~~~~~~~~~IvsfD~~~--e~~~~i~~P~~~~~~~~l~~~ 159 (254)
.+.+.++.++ . |+.+.... .++.-+ .+|+.+... .....|+..|+++ +.++.+- |........+...
T Consensus 295 ~l~~~d~~~~~~~~~~~l~~~~~~~~~~~~~dg~~l~~~s~~~-~~~~~l~~~d~~~~~~~~~~l~-~~~~~~l~~~~~~ 372 (741)
T 1yr2_A 295 TVHVARVTNGKIGPVTALIPDLKAQWDFVDGVGDQLWFVSGDG-APLKKIVRVDLSGSTPRFDTVV-PESKDNLESVGIA 372 (741)
T ss_dssp EEEEEEEETTEECCCEEEECSSSSCEEEEEEETTEEEEEECTT-CTTCEEEEEECSSSSCEEEEEE-CCCSSEEEEEEEE
T ss_pred eEEEEECCCCCCcccEEecCCCCceEEEEeccCCEEEEEECCC-CCCCEEEEEeCCCCccccEEEe-cCCCCeEEEEEEE
Confidence 4455555554 5 76665431 334445 777765432 2246899999988 4676553 3322112233445
Q ss_pred CCeEEEEecCCCCEEEEEEECCCcceEEEEEecC-CCcceeeEEEEeCC-eEEEEeCccccCCEEEEEECCCCcEEEE
Q 039648 160 EDSLSIVIPDAEQCFEIWVMNDNKCWAKHLTLGP-FFNFRINFGFWKND-AFFIESNSRIYGGCLFLHEHRTKEIKNL 235 (254)
Q Consensus 160 ~g~L~~~~~~~~~~~~IW~l~~~~~W~~~~~i~~-~~~~~~~~~~~~~g-~i~l~~~~~~~~~~~~~yd~~t~~~~~~ 235 (254)
++.|.+... ......||+++-.+. ....+.. ......-+....++ .+++..........++.||+.+++.+.+
T Consensus 373 ~~~lv~~~~-~dg~~~l~~~~~~g~--~~~~l~~~~~~~v~~~~~s~d~~~l~~~~ss~~~P~~i~~~d~~tg~~~~l 447 (741)
T 1yr2_A 373 GNRLFASYI-HDAKSQVLAFDLDGK--PAGAVSLPGIGSASGLSGRPGDRHAYLSFSSFTQPATVLALDPATAKTTPW 447 (741)
T ss_dssp BTEEEEEEE-ETTEEEEEEEETTSC--EEEECBCSSSCEEEEEECCBTCSCEEEEEEETTEEEEEEEEETTTTEEEEC
T ss_pred CCEEEEEEE-ECCEEEEEEEeCCCC--ceeeccCCCCeEEEEeecCCCCCEEEEEEcCCCCCCEEEEEECCCCcEEEE
Confidence 788776663 245678888873122 2233431 11122223333344 4665543222356799999999886655
No 50
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=43.53 E-value=1.1e+02 Score=23.30 Aligned_cols=101 Identities=9% Similarity=-0.063 Sum_probs=51.0
Q ss_pred eEEEEEECCCcceeEecCCCCCCceeEEEEe-CCe-EEEEecCCCCEEEEEEECC-CcceEEEEEecCCCcceeeEEEEe
Q 039648 129 KVILSFHMDNEVFEEIKIPPHVNYYSSISLY-EDS-LSIVIPDAEQCFEIWVMND-NKCWAKHLTLGPFFNFRINFGFWK 205 (254)
Q Consensus 129 ~~IvsfD~~~e~~~~i~~P~~~~~~~~l~~~-~g~-L~~~~~~~~~~~~IW~l~~-~~~W~~~~~i~~~~~~~~~~~~~~ 205 (254)
..|..+|+.+.....+..... ....+.-. +|. |++.. .....+.||.++. .... ..+.........+.+..
T Consensus 153 ~~l~~~~~~~~~~~~~~~~~~--~~~~~~~s~dg~~l~~~~-~~~~~~~i~~~~~~~~~~---~~~~~~~~~~~~~~~s~ 226 (297)
T 2ojh_A 153 FDIYSMDIDSGVETRLTHGEG--RNDGPDYSPDGRWIYFNS-SRTGQMQIWRVRVDGSSV---ERITDSAYGDWFPHPSP 226 (297)
T ss_dssp EEEEEEETTTCCEEECCCSSS--CEEEEEECTTSSEEEEEE-CTTSSCEEEEEETTSSCE---EECCCCSEEEEEEEECT
T ss_pred eEEEEEECCCCcceEcccCCC--ccccceECCCCCEEEEEe-cCCCCccEEEECCCCCCc---EEEecCCcccCCeEECC
Confidence 367777777766655432221 11222222 454 44444 3356789999874 3322 22222111223344556
Q ss_pred CCeEE-EEeCccc-------cCCEEEEEECCCCcEEEE
Q 039648 206 NDAFF-IESNSRI-------YGGCLFLHEHRTKEIKNL 235 (254)
Q Consensus 206 ~g~i~-l~~~~~~-------~~~~~~~yd~~t~~~~~~ 235 (254)
+|..+ +...... ....+..+|+++++.+.+
T Consensus 227 dg~~l~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~~ 264 (297)
T 2ojh_A 227 SGDKVVFVSYDADVFDHPRDLDVRVQLMDMDGGNVETL 264 (297)
T ss_dssp TSSEEEEEEEETTCCSCCSSEEEEEEEEETTSCSCEEE
T ss_pred CCCEEEEEEcCCCCCcccccCceEEEEEecCCCCceee
Confidence 77644 3332100 025699999999877655
No 51
>1egx_A VAsp, vasodilator-stimulated phosphoprotein; EVH1, VAsp-ENA, poly-proline-binding domain, signaling protein; NMR {Homo sapiens} SCOP: b.55.1.4
Probab=43.16 E-value=35 Score=23.78 Aligned_cols=42 Identities=12% Similarity=0.271 Sum_probs=30.0
Q ss_pred cEEEEcCcccccccCCCCCCCCCCCCCCCCcceEEEEeeCCCCCeEEEEEe
Q 039648 26 RLTIWNPATREFRNLPNYKYCNSSNRLIPPSTFICLESDPINNDFKLLFVH 76 (254)
Q Consensus 26 ~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~g~g~d~~~~~yKVv~~~ 76 (254)
++++.+|.|++| +|..... . -...+.|..|+..+.|.|+...
T Consensus 12 ~V~~~d~~~~~W--~p~~~g~--~-----gvs~V~~~~d~~~~~yrI~~~~ 53 (115)
T 1egx_A 12 TVMLYDDGNKRW--LPAGTGP--Q-----AFSRVQIYHNPTANSFRVVGRK 53 (115)
T ss_dssp ECBEECTTTSSC--CBSSCSC--C-----CCEEEEEEEETTTTEEEEEEEE
T ss_pred EEEEEcCCCCce--eECCCCC--C-----CccEEEEEEeCCCCEEEEEEEE
Confidence 358899999996 4554211 0 1235888999999999999875
No 52
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=42.26 E-value=1.3e+02 Score=23.99 Aligned_cols=192 Identities=11% Similarity=0.088 Sum_probs=87.8
Q ss_pred ccCceEEEEEcCCccEEEEcCcccccccCCCCCCCCCCCCCCCCcceEEEEeeCCCCCeEEEEEeeeeccccccCCCcCe
Q 039648 12 YHDGLFCIMQSSTNRLTIWNPATREFRNLPNYKYCNSSNRLIPPSTFICLESDPINNDFKLLFVHNLWNEKRKRYGKVPN 91 (254)
Q Consensus 12 scnGLlcl~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~g~g~d~~~~~yKVv~~~~~~~~~~~~~~~~~~ 91 (254)
+-+|-+++....+..+.|||..++++..+-..... ......+.+.+.. ++ ++... ..-.
T Consensus 17 s~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~h--------~~~v~~~~~~~~~-~~-l~~~~-----------~dg~ 75 (372)
T 1k8k_C 17 NKDRTQIAICPNNHEVHIYEKSGNKWVQVHELKEH--------NGQVTGVDWAPDS-NR-IVTCG-----------TDRN 75 (372)
T ss_dssp CTTSSEEEEECSSSEEEEEEEETTEEEEEEEEECC--------SSCEEEEEEETTT-TE-EEEEE-----------TTSC
T ss_pred CCCCCEEEEEeCCCEEEEEeCCCCcEEeeeeecCC--------CCcccEEEEeCCC-CE-EEEEc-----------CCCe
Confidence 44565444443333579999999853222211111 1234566666633 22 22211 1225
Q ss_pred EEEEEccCCceeecccc-----C-ceEEEE--EEEEEEEecCCCceEEEEEECCCcc----eeEecCCCCCCceeEEEEe
Q 039648 92 VQVYGFRTNSWREVHGH-----Q-LDRYFK--VCYWLVIADTRDLKVILSFHMDNEV----FEEIKIPPHVNYYSSISLY 159 (254)
Q Consensus 92 ~~Vys~~~~~Wr~~~~~-----p-~~v~~~--~lyWl~~~~~~~~~~IvsfD~~~e~----~~~i~~P~~~~~~~~l~~~ 159 (254)
+.+|+..++.+...... + ..+.++ .-+-++.... ..|..+|++++. ...+..+-.. .-..+.-.
T Consensus 76 i~vwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d---~~v~i~d~~~~~~~~~~~~~~~~~~~-~i~~~~~~ 151 (372)
T 1k8k_C 76 AYVWTLKGRTWKPTLVILRINRAARCVRWAPNEKKFAVGSGS---RVISICYFEQENDWWVCKHIKKPIRS-TVLSLDWH 151 (372)
T ss_dssp EEEEEEETTEEEEEEECCCCSSCEEEEEECTTSSEEEEEETT---SSEEEEEEETTTTEEEEEEECTTCCS-CEEEEEEC
T ss_pred EEEEECCCCeeeeeEEeecCCCceeEEEECCCCCEEEEEeCC---CEEEEEEecCCCcceeeeeeecccCC-CeeEEEEc
Confidence 78888888766543221 1 222222 1111111211 235556666543 2223222111 12233322
Q ss_pred -CCeEEEEecCCCCEEEEEEECC--------Ccce-------EEEEEecCCCcceeeEEEEeCCeEEEEeCccccCCEEE
Q 039648 160 -EDSLSIVIPDAEQCFEIWVMND--------NKCW-------AKHLTLGPFFNFRINFGFWKNDAFFIESNSRIYGGCLF 223 (254)
Q Consensus 160 -~g~L~~~~~~~~~~~~IW~l~~--------~~~W-------~~~~~i~~~~~~~~~~~~~~~g~i~l~~~~~~~~~~~~ 223 (254)
+|.+.++. .....+.+|-++. ...| .....+........-+.+..++..++.... ++.+.
T Consensus 152 ~~~~~l~~~-~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~---d~~i~ 227 (372)
T 1k8k_C 152 PNSVLLAAG-SCDFKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSSCGWVHGVCFSANGSRVAWVSH---DSTVC 227 (372)
T ss_dssp TTSSEEEEE-ETTSCEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECCCCSSCEEEEEECSSSSEEEEEET---TTEEE
T ss_pred CCCCEEEEE-cCCCCEEEEEcccccccccccccccccccchhhheEecCCCCCeEEEEEECCCCCEEEEEeC---CCEEE
Confidence 44444444 2367899999752 1111 222222211111233444556665555442 77899
Q ss_pred EEECCCCcE
Q 039648 224 LHEHRTKEI 232 (254)
Q Consensus 224 ~yd~~t~~~ 232 (254)
+||+++++.
T Consensus 228 i~d~~~~~~ 236 (372)
T 1k8k_C 228 LADADKKMA 236 (372)
T ss_dssp EEEGGGTTE
T ss_pred EEECCCCce
Confidence 999987654
No 53
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=42.03 E-value=1.4e+02 Score=24.33 Aligned_cols=60 Identities=5% Similarity=0.116 Sum_probs=35.7
Q ss_pred CCCEEEEEEECC-CcceEEEEEe-cCCCcceeeEEEEeCCeEEEEeCccccCCEEEEEECCCCcEE
Q 039648 170 AEQCFEIWVMND-NKCWAKHLTL-GPFFNFRINFGFWKNDAFFIESNSRIYGGCLFLHEHRTKEIK 233 (254)
Q Consensus 170 ~~~~~~IW~l~~-~~~W~~~~~i-~~~~~~~~~~~~~~~g~i~l~~~~~~~~~~~~~yd~~t~~~~ 233 (254)
....+.||-++. +......... .... ...-+.+..+|..++.... ++.+.+||+++++..
T Consensus 101 ~dg~v~lWd~~~~~~~~~~~~~~~~H~~-~V~~v~~spdg~~l~sgs~---d~~i~iwd~~~~~~~ 162 (344)
T 4gqb_B 101 DSGAVELWELDENETLIVSKFCKYEHDD-IVSTVSVLSSGTQAVSGSK---DICIKVWDLAQQVVL 162 (344)
T ss_dssp TTSEEEEEEECTTSSCEEEEEEEECCSS-CEEEEEECTTSSEEEEEET---TSCEEEEETTTTEEE
T ss_pred CCCEEEEEeccCCCceeEeeccccCCCC-CEEEEEECCCCCEEEEEeC---CCeEEEEECCCCcEE
Confidence 467899999987 2233332222 1211 2233455667776665542 678899999887654
No 54
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=41.11 E-value=1.6e+02 Score=24.69 Aligned_cols=181 Identities=13% Similarity=0.090 Sum_probs=89.5
Q ss_pred ccEEEEcCcccccccCCCCCCCCCCCCCCCCcceEEEEeeCCCCCeEEEEEeeeeccccccCCCcCeEEEEEccCCceee
Q 039648 25 NRLTIWNPATREFRNLPNYKYCNSSNRLIPPSTFICLESDPINNDFKLLFVHNLWNEKRKRYGKVPNVQVYGFRTNSWRE 104 (254)
Q Consensus 25 ~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~g~g~d~~~~~yKVv~~~~~~~~~~~~~~~~~~~~Vys~~~~~Wr~ 104 (254)
..+++||..|++.+.+...+. ....+.+.|..+ + ++.... ......+.+++..++..+.
T Consensus 203 ~~i~~~d~~tg~~~~l~~~~~-----------~~~~~~~spdg~-~-la~~~~--------~~g~~~i~~~d~~~~~~~~ 261 (415)
T 2hqs_A 203 SALVIQTLANGAVRQVASFPR-----------HNGAPAFSPDGS-K-LAFALS--------KTGSLNLYVMDLASGQIRQ 261 (415)
T ss_dssp CEEEEEETTTCCEEEEECCSS-----------CEEEEEECTTSS-E-EEEEEC--------TTSSCEEEEEETTTCCEEE
T ss_pred cEEEEEECCCCcEEEeecCCC-----------cccCEEEcCCCC-E-EEEEEe--------cCCCceEEEEECCCCCEEe
Confidence 357999999988776543211 234556665432 2 222211 1123456777887776665
Q ss_pred ccccC---ceE-EEE---EEEEEEEecCCCceEEEEEECCCcceeEecCCCCCCceeEEEEe-CC-eEEEEecC-CCCEE
Q 039648 105 VHGHQ---LDR-YFK---VCYWLVIADTRDLKVILSFHMDNEVFEEIKIPPHVNYYSSISLY-ED-SLSIVIPD-AEQCF 174 (254)
Q Consensus 105 ~~~~p---~~v-~~~---~lyWl~~~~~~~~~~IvsfD~~~e~~~~i~~P~~~~~~~~l~~~-~g-~L~~~~~~-~~~~~ 174 (254)
+...+ ..+ +.. .++.....+ ....|..+|+.+.+...+..... ....+.-. +| .|+..... ....+
T Consensus 262 l~~~~~~~~~~~~spdg~~l~~~s~~~--g~~~i~~~d~~~~~~~~l~~~~~--~~~~~~~spdG~~l~~~~~~~g~~~i 337 (415)
T 2hqs_A 262 VTDGRSNNTEPTWFPDSQNLAFTSDQA--GRPQVYKVNINGGAPQRITWEGS--QNQDADVSSDGKFMVMVSSNGGQQHI 337 (415)
T ss_dssp CCCCSSCEEEEEECTTSSEEEEEECTT--SSCEEEEEETTSSCCEECCCSSS--EEEEEEECTTSSEEEEEEECSSCEEE
T ss_pred CcCCCCcccceEECCCCCEEEEEECCC--CCcEEEEEECCCCCEEEEecCCC--cccCeEECCCCCEEEEEECcCCceEE
Confidence 54332 222 221 343333211 22468888998876555433221 11122222 44 44444422 23456
Q ss_pred EEEEECCCcceEEEEEecCCCcceeeEEEEeCCeEE-EEeCccccCCEEEEEECCCCcEEEEE
Q 039648 175 EIWVMNDNKCWAKHLTLGPFFNFRINFGFWKNDAFF-IESNSRIYGGCLFLHEHRTKEIKNLQ 236 (254)
Q Consensus 175 ~IW~l~~~~~W~~~~~i~~~~~~~~~~~~~~~g~i~-l~~~~~~~~~~~~~yd~~t~~~~~~~ 236 (254)
.+|-++. .... .+.... ....+.+..+|..+ +.... .....+..+|+.++..+.+.
T Consensus 338 ~~~d~~~-~~~~---~l~~~~-~~~~~~~spdg~~l~~~s~~-~~~~~l~~~d~~g~~~~~l~ 394 (415)
T 2hqs_A 338 AKQDLAT-GGVQ---VLSSTF-LDETPSLAPNGTMVIYSSSQ-GMGSVLNLVSTDGRFKARLP 394 (415)
T ss_dssp EEEETTT-CCEE---ECCCSS-SCEEEEECTTSSEEEEEEEE-TTEEEEEEEETTSCCEEECC
T ss_pred EEEECCC-CCEE---EecCCC-CcCCeEEcCCCCEEEEEEcC-CCccEEEEEECCCCcEEEee
Confidence 6666654 3332 222211 22334455677744 44331 00127999999988887663
No 55
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=41.02 E-value=1.5e+02 Score=27.26 Aligned_cols=132 Identities=14% Similarity=0.080 Sum_probs=62.6
Q ss_pred eEEEEEccCCceeecccc----CceEEE---E-EEEEEEEecCCCceEEEEEECCCcceeEecCCCCCCceeEEEE--eC
Q 039648 91 NVQVYGFRTNSWREVHGH----QLDRYF---K-VCYWLVIADTRDLKVILSFHMDNEVFEEIKIPPHVNYYSSISL--YE 160 (254)
Q Consensus 91 ~~~Vys~~~~~Wr~~~~~----p~~v~~---~-~lyWl~~~~~~~~~~IvsfD~~~e~~~~i~~P~~~~~~~~l~~--~~ 160 (254)
.+.+++..+..-+.+... |.++.+ + .|||..... ...|..+|++...-..+... .......|+. .+
T Consensus 476 ~I~v~d~dg~~~~~l~~~~~~~P~giavDp~~g~ly~td~~~---~~~I~~~~~dG~~~~~l~~~-~l~~PnGlavd~~~ 551 (699)
T 1n7d_A 476 TVSVADTKGVKRKTLFREQGSKPRAIVVDPVHGFMYWTDWGT---PAKIKKGGLNGVDIYSLVTE-NIQWPNGITLDLLS 551 (699)
T ss_dssp CEEEEBSSSCCEEEECCCSSCCCCCEECCSSSSCCEECCCSS---SCCEEBCCSSSCCCCEESCS-SCSSCCCEEECTTT
T ss_pred eEEEEecCCCceEEEEeCCCCCcceEEEccCCCcEEEcccCC---CCeEEEEeCCCCCeeEEEeC-CCCCccEEEEeccC
Confidence 455665554432222111 345555 4 789865321 23688888875543333111 1111122443 36
Q ss_pred CeEEEEecCCCCEEEEEEECCCcceEEEEEecCCCcceeeEEEEe-CCeEEEEeCccccCCEEEEEECCCCcEE
Q 039648 161 DSLSIVIPDAEQCFEIWVMNDNKCWAKHLTLGPFFNFRINFGFWK-NDAFFIESNSRIYGGCLFLHEHRTKEIK 233 (254)
Q Consensus 161 g~L~~~~~~~~~~~~IW~l~~~~~W~~~~~i~~~~~~~~~~~~~~-~g~i~l~~~~~~~~~~~~~yd~~t~~~~ 233 (254)
++|+++.. .... |++++-++.-.+.. +........|.++.- .+.|++.... ...+..+|..+++..
T Consensus 552 ~~LY~aD~-~~~~--I~~~d~dG~~~~~~-~~~~~~~~~P~glavd~~~lywtd~~---~~~V~~~d~~~G~~~ 618 (699)
T 1n7d_A 552 GRLYWVDS-KLHS--ISSIDVNGGNRKTI-LEDEKRLAHPFSLAVFEDKVFWTDII---NEAIFSANRLTGSDV 618 (699)
T ss_dssp CCEEEEET-TTTE--EEEECSSSSCCEEE-CCCSSSCSSCCCCEEETTEEEEECST---TTCEEEEETTTEEEE
T ss_pred CEEEEEec-CCCe--EEEEccCCCceEEE-EecCCcCCCceEeEEECCEEEEEeCC---CCeEEEEEccCCCce
Confidence 78877773 2333 45544312111111 111111345555432 3456665542 678999998876544
No 56
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=40.22 E-value=1.3e+02 Score=23.34 Aligned_cols=88 Identities=10% Similarity=0.133 Sum_probs=0.0
Q ss_pred eeEecCCCCCC--ceeEEEEeCCeEEEEecCCCCEEEEEEECCCcceEEEEEecCCCcceeeEEEEeCCeEEEEeCcccc
Q 039648 141 FEEIKIPPHVN--YYSSISLYEDSLSIVIPDAEQCFEIWVMNDNKCWAKHLTLGPFFNFRINFGFWKNDAFFIESNSRIY 218 (254)
Q Consensus 141 ~~~i~~P~~~~--~~~~l~~~~g~L~~~~~~~~~~~~IW~l~~~~~W~~~~~i~~~~~~~~~~~~~~~g~i~l~~~~~~~ 218 (254)
++.+..|.... ....|.-..+.+..++. ...+.||-++. +.-.+......-.....-+.+..+|..++....
T Consensus 14 ~rvldap~~~~d~y~~~l~WS~~~~lAvg~--D~tV~iWd~~t-g~~~~~~~~~~~~~~V~~v~~~~~~~~l~sgs~--- 87 (318)
T 4ggc_A 14 DRILDAPEIRNDYYLNLVDWSSGNVLAVAL--DNSVYLWSASS-GDILQLLQMEQPGEYISSVAWIKEGNYLAVGTS--- 87 (318)
T ss_dssp SEEEECTTCCCCTTCBCEEECTTSEEEEEE--TTEEEEEETTT-CCEEEEEECCSTTCCEEEEEECTTSSEEEEEET---
T ss_pred CEEeeCCCCcccccceEEEECCCCEEEEEe--CCEEEEEECCC-CCEEEEEEecCCCCeEEEEEECCCCCEEEEEEC---
Q ss_pred CCEEEEEECCCCcEEE
Q 039648 219 GGCLFLHEHRTKEIKN 234 (254)
Q Consensus 219 ~~~~~~yd~~t~~~~~ 234 (254)
++.+.+||.++++...
T Consensus 88 Dg~v~iw~~~~~~~~~ 103 (318)
T 4ggc_A 88 SAEVQLWDVQQQKRLR 103 (318)
T ss_dssp TSEEEEEETTTTEEEE
T ss_pred CCcEEEeecCCceeEE
No 57
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=39.89 E-value=1.4e+02 Score=23.74 Aligned_cols=65 Identities=9% Similarity=0.142 Sum_probs=39.8
Q ss_pred CeEEEEecCCCCEEEEEEECCCcceEEEEEecCCCcceeeEEEEeC--CeEEEEeCccccCCEEEEEECCCC
Q 039648 161 DSLSIVIPDAEQCFEIWVMNDNKCWAKHLTLGPFFNFRINFGFWKN--DAFFIESNSRIYGGCLFLHEHRTK 230 (254)
Q Consensus 161 g~L~~~~~~~~~~~~IW~l~~~~~W~~~~~i~~~~~~~~~~~~~~~--g~i~l~~~~~~~~~~~~~yd~~t~ 230 (254)
+.+.+.+. ....+.||-++. ..|.....+........-+.+..+ +..++.... ++.+.+||++++
T Consensus 69 ~~~l~s~~-~dg~v~iwd~~~-~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~---d~~i~v~d~~~~ 135 (379)
T 3jrp_A 69 GTILASCS-YDGKVLIWKEEN-GRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASS---DGKVSVVEFKEN 135 (379)
T ss_dssp CSEEEEEE-TTSCEEEEEEET-TEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEET---TSEEEEEECCTT
T ss_pred CCEEEEec-cCCEEEEEEcCC-CceeEeeeecCCCcceEEEEeCCCCCCCEEEEecC---CCcEEEEecCCC
Confidence 44444442 367899999986 667776666532222333444555 555555442 788999999877
No 58
>1ddw_A GLGF-domain protein homer; pleckstrin homology domain fold, signaling protein; 1.70A {Rattus norvegicus} SCOP: b.55.1.4 PDB: 1ddv_A 2p8v_A 1i7a_A*
Probab=39.47 E-value=42 Score=23.60 Aligned_cols=39 Identities=13% Similarity=0.234 Sum_probs=28.0
Q ss_pred cEEEEcCccc-ccccCCCCCCCCCCCCCCCCcceEEEEeeCCCCCeEEEEEe
Q 039648 26 RLTIWNPATR-EFRNLPNYKYCNSSNRLIPPSTFICLESDPINNDFKLLFVH 76 (254)
Q Consensus 26 ~~~V~NP~T~-~~~~LP~~~~~~~~~~~~~~~~~~g~g~d~~~~~yKVv~~~ 76 (254)
++++.+|.|+ +|.. .... ...+.+-+|+..+.|+|+.+.
T Consensus 12 ~V~~~D~~tk~~W~p--~g~~----------~~~V~~~~d~~~~~yRIv~~~ 51 (120)
T 1ddw_A 12 HVFQIDPNTKKNWVP--TSKH----------AVTVSYFYDSTRNVYRIISLD 51 (120)
T ss_dssp EEEEECTTTSCSEEE--SCSS----------CEEEEEEEETTTTEEEEEEEE
T ss_pred EEEEEcCCCCCceEe--CCCC----------ceEEEEEEcCCCCEEEEEEcc
Confidence 4689999996 8953 2211 135678889998999998853
No 59
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=38.16 E-value=1.5e+02 Score=23.59 Aligned_cols=114 Identities=6% Similarity=-0.020 Sum_probs=61.6
Q ss_pred EEEEEEEecCCCceEEEEEECCCcceeEecC-CCCCCceeEEEEe-CCe-EEEEecCCCCEEEEEEECCCcceEEEEEec
Q 039648 116 VCYWLVIADTRDLKVILSFHMDNEVFEEIKI-PPHVNYYSSISLY-EDS-LSIVIPDAEQCFEIWVMNDNKCWAKHLTLG 192 (254)
Q Consensus 116 ~lyWl~~~~~~~~~~IvsfD~~~e~~~~i~~-P~~~~~~~~l~~~-~g~-L~~~~~~~~~~~~IW~l~~~~~W~~~~~i~ 192 (254)
.+|...... ....|..+|+++++.+.+.. +........+... +|+ |.+.. .....+.+|.++..+....+..+.
T Consensus 52 ~l~~~~~~~--~~~~v~~~~~~~g~~~~~~~~~~~~~~p~~~a~spdg~~l~~~~-~~~~~v~v~~~~~~g~~~~~~~~~ 128 (347)
T 3hfq_A 52 CLYSVDKED--DEGGIAAWQIDGQTAHKLNTVVAPGTPPAYVAVDEARQLVYSAN-YHKGTAEVMKIAADGALTLTDTVQ 128 (347)
T ss_dssp EEEEEEEET--TEEEEEEEEEETTEEEEEEEEEEESCCCSEEEEETTTTEEEEEE-TTTTEEEEEEECTTSCEEEEEEEE
T ss_pred eEEEEEecC--CCceEEEEEecCCcEEEeeeeecCCCCCEEEEECCCCCEEEEEe-CCCCEEEEEEeCCCCCeeecceee
Confidence 665554431 12478899998777665532 1111112233333 455 54444 346889999997534444444443
Q ss_pred CCC-------cc--eeeEEEEeCCeEEEEeCccccCCEEEEEECC-CCcEEEE
Q 039648 193 PFF-------NF--RINFGFWKNDAFFIESNSRIYGGCLFLHEHR-TKEIKNL 235 (254)
Q Consensus 193 ~~~-------~~--~~~~~~~~~g~i~l~~~~~~~~~~~~~yd~~-t~~~~~~ 235 (254)
... .. ..-+.+..+|+++..... +..+..||++ ++++..+
T Consensus 129 ~~~~~p~~~~~~~~~~~~~~spdg~l~v~~~~---~~~v~~~~~~~~g~~~~~ 178 (347)
T 3hfq_A 129 HSGHGPRPEQDGSHIHYTDLTPDNRLAVIDLG---SDKVYVYNVSDAGQLSEQ 178 (347)
T ss_dssp CCCCCSSTTCSSCCEEEEEECTTSCEEEEETT---TTEEEEEEECTTSCEEEE
T ss_pred cCCCCCCccccCCCceEEEECCCCcEEEEeCC---CCEEEEEEECCCCcEEEe
Confidence 211 01 122455667785554442 5678999988 5666543
No 60
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=36.95 E-value=1.7e+02 Score=23.70 Aligned_cols=182 Identities=8% Similarity=-0.015 Sum_probs=89.4
Q ss_pred EEEEEcCCccEEEEcCcccccccCCCCCCCCCCCCCCCCcceEEEEeeCCCCCeEEEEEeeeeccccccCCCcCeEEEEE
Q 039648 17 FCIMQSSTNRLTIWNPATREFRNLPNYKYCNSSNRLIPPSTFICLESDPINNDFKLLFVHNLWNEKRKRYGKVPNVQVYG 96 (254)
Q Consensus 17 lcl~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~g~g~d~~~~~yKVv~~~~~~~~~~~~~~~~~~~~Vys 96 (254)
|.+.......+.|||+.+++....-... ....++.+++..+ +-++.. ...-.+.+++
T Consensus 88 l~~~~~~~~~v~v~d~~~~~~~~~~~~~-----------~~~~~~~~s~dg~-~l~~~~-----------~~~~~v~~~d 144 (391)
T 1l0q_A 88 VYVTNMASSTLSVIDTTSNTVAGTVKTG-----------KSPLGLALSPDGK-KLYVTN-----------NGDKTVSVIN 144 (391)
T ss_dssp EEEEETTTTEEEEEETTTTEEEEEEECS-----------SSEEEEEECTTSS-EEEEEE-----------TTTTEEEEEE
T ss_pred EEEEECCCCEEEEEECCCCeEEEEEeCC-----------CCcceEEECCCCC-EEEEEe-----------CCCCEEEEEE
Confidence 4344433334788998887765432211 1234566665432 211221 1123677788
Q ss_pred ccCCceeecccc---CceEEEE---EEEEEEEecCCCceEEEEEECCCcceeE-ecCCCCCCceeEEEEe-CCe-EEEEe
Q 039648 97 FRTNSWREVHGH---QLDRYFK---VCYWLVIADTRDLKVILSFHMDNEVFEE-IKIPPHVNYYSSISLY-EDS-LSIVI 167 (254)
Q Consensus 97 ~~~~~Wr~~~~~---p~~v~~~---~lyWl~~~~~~~~~~IvsfD~~~e~~~~-i~~P~~~~~~~~l~~~-~g~-L~~~~ 167 (254)
.+++.....-.. +..+.++ ..-|++... ...|..+|+++.+... +.... ....+... +|. |.+..
T Consensus 145 ~~~~~~~~~~~~~~~~~~~~~~~dg~~l~~~~~~---~~~v~~~d~~~~~~~~~~~~~~---~~~~~~~~~~g~~l~~~~ 218 (391)
T 1l0q_A 145 TVTKAVINTVSVGRSPKGIAVTPDGTKVYVANFD---SMSISVIDTVTNSVIDTVKVEA---APSGIAVNPEGTKAYVTN 218 (391)
T ss_dssp TTTTEEEEEEECCSSEEEEEECTTSSEEEEEETT---TTEEEEEETTTTEEEEEEECSS---EEEEEEECTTSSEEEEEE
T ss_pred CCCCcEEEEEecCCCcceEEECCCCCEEEEEeCC---CCEEEEEECCCCeEEEEEecCC---CccceEECCCCCEEEEEe
Confidence 777653322111 1233332 222233222 2368889998875543 33221 11222222 444 44443
Q ss_pred c-CCCCEEEEEEECCCcceEEEEEecCCCcceeeEEEEeCCe-EEEEeCccccCCEEEEEECCCCcEEE
Q 039648 168 P-DAEQCFEIWVMNDNKCWAKHLTLGPFFNFRINFGFWKNDA-FFIESNSRIYGGCLFLHEHRTKEIKN 234 (254)
Q Consensus 168 ~-~~~~~~~IW~l~~~~~W~~~~~i~~~~~~~~~~~~~~~g~-i~l~~~~~~~~~~~~~yd~~t~~~~~ 234 (254)
. .....+.+|-++. . ..+..++... ...-+.+..+|. +++.... +..+..||+++++...
T Consensus 219 ~~~~~~~v~~~d~~~-~--~~~~~~~~~~-~~~~~~~s~dg~~l~~s~~~---d~~v~v~d~~~~~~~~ 280 (391)
T 1l0q_A 219 VDKYFNTVSMIDTGT-N--KITARIPVGP-DPAGIAVTPDGKKVYVALSF---XNTVSVIDTATNTITA 280 (391)
T ss_dssp ECSSCCEEEEEETTT-T--EEEEEEECCS-SEEEEEECTTSSEEEEEETT---TTEEEEEETTTTEEEE
T ss_pred cCcCCCcEEEEECCC-C--eEEEEEecCC-CccEEEEccCCCEEEEEcCC---CCEEEEEECCCCcEEE
Confidence 2 1467889998875 2 2233343222 112344556776 4455442 7889999999886653
No 61
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=36.03 E-value=1.5e+02 Score=22.78 Aligned_cols=188 Identities=14% Similarity=0.161 Sum_probs=95.2
Q ss_pred ccCceEEEEEcCCccEEEEcCcccccccCCCCCCCCCCCCCCCCcceEEEEeeCCCCCeEEEEEeeeeccccccCCCcCe
Q 039648 12 YHDGLFCIMQSSTNRLTIWNPATREFRNLPNYKYCNSSNRLIPPSTFICLESDPINNDFKLLFVHNLWNEKRKRYGKVPN 91 (254)
Q Consensus 12 scnGLlcl~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~g~g~d~~~~~yKVv~~~~~~~~~~~~~~~~~~ 91 (254)
..+|-+.+.......+.++||. ++...++.+.. .....++.+|+..+ +.. ... ....
T Consensus 28 d~~g~l~v~~~~~~~v~~~~~~-~~~~~~~~~~~---------~~~~~~i~~~~~g~---l~v-~~~---------~~~~ 84 (300)
T 2qc5_A 28 SEDGKVWFTQHKANKISSLDQS-GRIKEFEVPTP---------DAKVMCLIVSSLGD---IWF-TEN---------GANK 84 (300)
T ss_dssp CTTSCEEEEETTTTEEEEECTT-SCEEEEECSST---------TCCEEEEEECTTSC---EEE-EET---------TTTE
T ss_pred CCCCCEEEEcCCCCeEEEECCC-CceEEEECCCC---------CCcceeEEECCCCC---EEE-Eec---------CCCe
Confidence 4567766666543457899998 77665543211 12345666665432 111 110 0123
Q ss_pred EEEEEccCCceeecccc-----CceEEEE--EEEEEEEecCCCceEEEEEECCCcceeEecCCCCCCceeEEEE-eCCeE
Q 039648 92 VQVYGFRTNSWREVHGH-----QLDRYFK--VCYWLVIADTRDLKVILSFHMDNEVFEEIKIPPHVNYYSSISL-YEDSL 163 (254)
Q Consensus 92 ~~Vys~~~~~Wr~~~~~-----p~~v~~~--~lyWl~~~~~~~~~~IvsfD~~~e~~~~i~~P~~~~~~~~l~~-~~g~L 163 (254)
+.+|+.. +..+..... |.++.++ --.|++... ...|..+|.+ +++..+.+|........+.. -+|.|
T Consensus 85 v~~~d~~-g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~---~~~i~~~~~~-g~~~~~~~~~~~~~~~~i~~d~~g~l 159 (300)
T 2qc5_A 85 IGKLSKK-GGFTEYPLPQPDSGPYGITEGLNGDIWFTQLN---GDRIGKLTAD-GTIYEYDLPNKGSYPAFITLGSDNAL 159 (300)
T ss_dssp EEEECTT-SCEEEEECSSTTCCEEEEEECSTTCEEEEETT---TTEEEEECTT-SCEEEEECSSTTCCEEEEEECTTSSE
T ss_pred EEEECCC-CCeEEecCCCCCCCCccceECCCCCEEEEccC---CCeEEEECCC-CCEEEccCCCCCCCceeEEECCCCCE
Confidence 4445444 444433221 2344444 223454332 2379999998 66666666643222233443 35777
Q ss_pred EEEecCCCCEEEEEEECCCcceEEEEEecCCCcceeeEE--EEeCCeEEEEeCccccCCEEEEEECCCCcEEEEEE
Q 039648 164 SIVIPDAEQCFEIWVMNDNKCWAKHLTLGPFFNFRINFG--FWKNDAFFIESNSRIYGGCLFLHEHRTKEIKNLQV 237 (254)
Q Consensus 164 ~~~~~~~~~~~~IW~l~~~~~W~~~~~i~~~~~~~~~~~--~~~~g~i~l~~~~~~~~~~~~~yd~~t~~~~~~~~ 237 (254)
.+.... .. .|++++....... +.++. ....|.+ +..+|.+++.... ...+..||+ ++++.....
T Consensus 160 ~v~~~~-~~--~i~~~~~~g~~~~-~~~~~--~~~~~~~i~~d~~g~l~v~~~~---~~~i~~~~~-~g~~~~~~~ 225 (300)
T 2qc5_A 160 WFTENQ-NN--SIGRITNTGKLEE-YPLPT--NAAAPVGITSGNDGALWFVEIM---GNKIGRITT-TGEISEYDI 225 (300)
T ss_dssp EEEETT-TT--EEEEECTTCCEEE-EECSS--TTCCEEEEEECTTSSEEEEETT---TTEEEEECT-TCCEEEEEC
T ss_pred EEEecC-CC--eEEEECCCCcEEE-eeCCC--CCCCcceEEECCCCCEEEEccC---CCEEEEEcC-CCcEEEEEC
Confidence 666531 23 3555554334333 22221 1233433 4457788887752 567999999 566665543
No 62
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=35.99 E-value=1.6e+02 Score=23.24 Aligned_cols=65 Identities=11% Similarity=0.100 Sum_probs=36.6
Q ss_pred CeEEEEecCCCCEEEEEEECCCc-ceEEEEEecCC--CcceeeEEEEeCCeEEEEeCccccCCEEEEEECCC
Q 039648 161 DSLSIVIPDAEQCFEIWVMNDNK-CWAKHLTLGPF--FNFRINFGFWKNDAFFIESNSRIYGGCLFLHEHRT 229 (254)
Q Consensus 161 g~L~~~~~~~~~~~~IW~l~~~~-~W~~~~~i~~~--~~~~~~~~~~~~g~i~l~~~~~~~~~~~~~yd~~t 229 (254)
|.+.++. .....+.||-++... .-.....+... .....-+.+..++..++.... ++.+.+||+.+
T Consensus 299 ~~~l~~~-~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~---dg~i~iwd~~~ 366 (366)
T 3k26_A 299 QKMLALG-NQVGKLYVWDLEVEDPHKAKCTTLTHHKCGAAIRQTSFSRDSSILIAVCD---DASIWRWDRLR 366 (366)
T ss_dssp SSEEEEE-CTTSCEEEEECCSSSGGGCEEEEECCTTCCSCEEEEEECTTSSEEEEEET---TSEEEEEEC--
T ss_pred CcEEEEE-ecCCcEEEEECCCCCCccccceEEcccccCCceEEEEeCCCCCeEEEEeC---CCEEEEEEecC
Confidence 5554444 346789999998722 22233334321 112233455567776666542 78899999864
No 63
>3q6k_A 43.2 kDa salivary protein; beta propeller, binding protein, serotonin, salivary gland, binding, ligand binging protein; HET: CIT SRO; 2.52A {Lutzomyia longipalpis} PDB: 3q6p_A* 3q6t_A*
Probab=35.06 E-value=86 Score=26.77 Aligned_cols=80 Identities=9% Similarity=0.246 Sum_probs=51.0
Q ss_pred ceEEEE--EEEEEEEecC------------CCceEEEEEECCCc---ceeEecCCCCCC----ceeEEEEe--------C
Q 039648 110 LDRYFK--VCYWLVIADT------------RDLKVILSFHMDNE---VFEEIKIPPHVN----YYSSISLY--------E 160 (254)
Q Consensus 110 ~~v~~~--~lyWl~~~~~------------~~~~~IvsfD~~~e---~~~~i~~P~~~~----~~~~l~~~--------~ 160 (254)
..+.++ --=|+...+. ..+-.|++||+.++ ..+.+.+|.... ....+..- +
T Consensus 90 ~~v~iD~~~rLWVLDtG~~~~~~~~~~~~~~~~pkLv~~DL~t~~~~li~~y~~p~~~~~~~S~l~di~VD~~~~~~~c~ 169 (381)
T 3q6k_A 90 YQPVIDDCRRLWVVDIGSVEYRSRGAKDYPSHRPAIVAYDLKQPNYPEVVRYYFPTRLVEKPTYFGGFAVDVANPKGDCS 169 (381)
T ss_dssp EEEEECTTCEEEEEECSSCSSCSTTGGGSCCCCCEEEEEESSSTTCCEEEEEECCGGGCCCGGGEEEEEEEESCTTTTSC
T ss_pred eEEEEcCCCcEEEEeCCCcCcCCCccccCCCCCceEEEEECCCCCceeEEEEECCHHhcccCCccceEEEecccCCCCCC
Confidence 456666 5567766542 12348999999987 567788886543 22233322 2
Q ss_pred CeEEEEecCCCCEEEEEEECCCcceEEEE
Q 039648 161 DSLSIVIPDAEQCFEIWVMNDNKCWAKHL 189 (254)
Q Consensus 161 g~L~~~~~~~~~~~~IW~l~~~~~W~~~~ 189 (254)
+..+.+.+.....|-|.-++.+.+|...+
T Consensus 170 ~~~aYItD~~~~gLIVydl~~~~swRv~~ 198 (381)
T 3q6k_A 170 ETFVYITNFLRGALFIYDHKKQDSWNVTH 198 (381)
T ss_dssp SEEEEEEETTTTEEEEEETTTTEEEEEEC
T ss_pred ccEEEEEcCCCCcEEEEECCCCcEEEEcc
Confidence 55666665556788888888777887663
No 64
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=35.03 E-value=1.7e+02 Score=23.40 Aligned_cols=94 Identities=10% Similarity=-0.015 Sum_probs=50.6
Q ss_pred EEEEEECCCcceeEecCCCCCCceeEEEEe-CCe-EEEEecC--CCCEEEEEEECC-CcceEEEEEecCCCcceeeEEEE
Q 039648 130 VILSFHMDNEVFEEIKIPPHVNYYSSISLY-EDS-LSIVIPD--AEQCFEIWVMND-NKCWAKHLTLGPFFNFRINFGFW 204 (254)
Q Consensus 130 ~IvsfD~~~e~~~~i~~P~~~~~~~~l~~~-~g~-L~~~~~~--~~~~~~IW~l~~-~~~W~~~~~i~~~~~~~~~~~~~ 204 (254)
.+..+|.++.+.+.+... .......+... +|+ |+.+... ....+.+|.++. .+....+..+.... ..|..+.
T Consensus 30 ~~~~~d~~~g~~~~~~~~-~~~~p~~l~~spdg~~l~~~~~~~~~~~~v~~~~~~~~~g~~~~~~~~~~~~--~~p~~~~ 106 (361)
T 3scy_A 30 YTFRFNEETGESLPLSDA-EVANPSYLIPSADGKFVYSVNEFSKDQAAVSAFAFDKEKGTLHLLNTQKTMG--ADPCYLT 106 (361)
T ss_dssp EEEEEETTTCCEEEEEEE-ECSCCCSEEECTTSSEEEEEECCSSTTCEEEEEEEETTTTEEEEEEEEECSS--SCEEEEE
T ss_pred EEEEEeCCCCCEEEeecc-cCCCCceEEECCCCCEEEEEEccCCCCCcEEEEEEeCCCCcEEEeeEeccCC--CCcEEEE
Confidence 566677777777665322 11111223333 344 5544432 357899999987 36666666654321 1333322
Q ss_pred eCCe-EEEEeCccccCCEEEEEECCC
Q 039648 205 KNDA-FFIESNSRIYGGCLFLHEHRT 229 (254)
Q Consensus 205 ~~g~-i~l~~~~~~~~~~~~~yd~~t 229 (254)
-+|. ++..... +..+..||+.+
T Consensus 107 ~dg~~l~~~~~~---~~~v~~~~~~~ 129 (361)
T 3scy_A 107 TNGKNIVTANYS---GGSITVFPIGQ 129 (361)
T ss_dssp ECSSEEEEEETT---TTEEEEEEBCT
T ss_pred ECCCEEEEEECC---CCEEEEEEeCC
Confidence 2555 4444432 56788898864
No 65
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=34.65 E-value=1.7e+02 Score=23.27 Aligned_cols=61 Identities=8% Similarity=0.110 Sum_probs=33.6
Q ss_pred CCCEEEEEEECC-CcceEEEEEecCCCcceeeEEEEeCCeEEEEeCccccCCEEEEEECCCCcEE
Q 039648 170 AEQCFEIWVMND-NKCWAKHLTLGPFFNFRINFGFWKNDAFFIESNSRIYGGCLFLHEHRTKEIK 233 (254)
Q Consensus 170 ~~~~~~IW~l~~-~~~W~~~~~i~~~~~~~~~~~~~~~g~i~l~~~~~~~~~~~~~yd~~t~~~~ 233 (254)
....+.||-+++ ...+..+..+..-.....-+.+..++.+++.... ++.+.+||.+++.++
T Consensus 127 ~D~~v~iwd~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~---D~~i~iW~~~~~~~~ 188 (330)
T 2hes_X 127 RDKSVWIWETDESGEEYECISVLQEHSQDVKHVIWHPSEALLASSSY---DDTVRIWKDYDDDWE 188 (330)
T ss_dssp TTSCEEEEECCTTCCCCEEEEEECCCSSCEEEEEECSSSSEEEEEET---TSCEEEEEEETTEEE
T ss_pred CCCEEEEEeccCCCCCeEEEEEeccCCCceEEEEECCCCCEEEEEcC---CCeEEEEECCCCCee
Confidence 467899999865 4455555544321111222334456665555442 566777777665443
No 66
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=34.20 E-value=1.7e+02 Score=23.13 Aligned_cols=67 Identities=10% Similarity=0.158 Sum_probs=37.9
Q ss_pred eEEEEecCCCCEEEEEEECC-Ccce-EEEEEecCCCcceeeEEEEeCCeEEEEeCccccCCEEEEEECCCCcE
Q 039648 162 SLSIVIPDAEQCFEIWVMND-NKCW-AKHLTLGPFFNFRINFGFWKNDAFFIESNSRIYGGCLFLHEHRTKEI 232 (254)
Q Consensus 162 ~L~~~~~~~~~~~~IW~l~~-~~~W-~~~~~i~~~~~~~~~~~~~~~g~i~l~~~~~~~~~~~~~yd~~t~~~ 232 (254)
.+.+.+ ..+..+.+|.+.. .... ..+..+..-.....-+.+..+|..++.... ++.+.+||+++++.
T Consensus 31 ~~l~s~-s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~dg~~l~s~s~---D~~v~~wd~~~~~~ 99 (319)
T 3frx_A 31 NLLLSA-SRDKTLISWKLTGDDQKFGVPVRSFKGHSHIVQDCTLTADGAYALSASW---DKTLRLWDVATGET 99 (319)
T ss_dssp TEEEEE-ETTSEEEEEEEEEETTEEEEEEEEEECCSSCEEEEEECTTSSEEEEEET---TSEEEEEETTTTEE
T ss_pred cEEEEe-cCCccEEEecCCCCCccccccceEEeCCcccEEEEEECCCCCEEEEEeC---CCEEEEEECCCCCe
Confidence 444444 3478999999875 2222 222222211112233455567776666542 78899999988764
No 67
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=34.03 E-value=39 Score=27.52 Aligned_cols=59 Identities=8% Similarity=0.110 Sum_probs=25.8
Q ss_pred CCCEEEEEEECCCcceEEEEEecCCCcceeeEEEEeCCeEEEEeCccccCCEEEEEECCCCc
Q 039648 170 AEQCFEIWVMNDNKCWAKHLTLGPFFNFRINFGFWKNDAFFIESNSRIYGGCLFLHEHRTKE 231 (254)
Q Consensus 170 ~~~~~~IW~l~~~~~W~~~~~i~~~~~~~~~~~~~~~g~i~l~~~~~~~~~~~~~yd~~t~~ 231 (254)
....+.||-++....|.....+........-+.+..++..++.... ++.+..||+++++
T Consensus 75 ~d~~v~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~---d~~i~iwd~~~~~ 133 (377)
T 3dwl_C 75 QDRNAYVYEKRPDGTWKQTLVLLRLNRAATFVRWSPNEDKFAVGSG---ARVISVCYFEQEN 133 (377)
T ss_dssp TTSSEEEC------CCCCEEECCCCSSCEEEEECCTTSSCCEEEES---SSCEEECCC----
T ss_pred CCCeEEEEEcCCCCceeeeeEecccCCceEEEEECCCCCEEEEEec---CCeEEEEEECCcc
Confidence 3678999998873336555554322111222333445554444331 5677788887764
No 68
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=32.84 E-value=2.1e+02 Score=23.54 Aligned_cols=192 Identities=11% Similarity=0.076 Sum_probs=94.7
Q ss_pred ccCceEEEEEcCCccEEEEcCccccccc-CCCCCCCCCCCCCCCCcceEEEEeeCCCCCeEEEEEeeeeccccccCCCcC
Q 039648 12 YHDGLFCIMQSSTNRLTIWNPATREFRN-LPNYKYCNSSNRLIPPSTFICLESDPINNDFKLLFVHNLWNEKRKRYGKVP 90 (254)
Q Consensus 12 scnGLlcl~~~~~~~~~V~NP~T~~~~~-LP~~~~~~~~~~~~~~~~~~g~g~d~~~~~yKVv~~~~~~~~~~~~~~~~~ 90 (254)
+.+|-+++.......+.+|++.+++... ++.. . ....++.+++..+ + ++.... ..-
T Consensus 178 ~~~~~~~~s~~~d~~v~~~d~~~~~~~~~~~~~-~----------~~~~~~~~~~~~~-~-l~~~~~----------~~~ 234 (433)
T 3bws_A 178 PEHNELWVSQMQANAVHVFDLKTLAYKATVDLT-G----------KWSKILLYDPIRD-L-VYCSNW----------ISE 234 (433)
T ss_dssp GGGTEEEEEEGGGTEEEEEETTTCCEEEEEECS-S----------SSEEEEEEETTTT-E-EEEEET----------TTT
T ss_pred cCCCEEEEEECCCCEEEEEECCCceEEEEEcCC-C----------CCeeEEEEcCCCC-E-EEEEec----------CCC
Confidence 4567666655543357999998866443 2211 1 1235666766543 2 222111 122
Q ss_pred eEEEEEccCCceee-cccc--CceEEEE---EEEEEEEecCC----CceEEEEEECCCcceeEe-cCCCCCCceeEEEEe
Q 039648 91 NVQVYGFRTNSWRE-VHGH--QLDRYFK---VCYWLVIADTR----DLKVILSFHMDNEVFEEI-KIPPHVNYYSSISLY 159 (254)
Q Consensus 91 ~~~Vys~~~~~Wr~-~~~~--p~~v~~~---~lyWl~~~~~~----~~~~IvsfD~~~e~~~~i-~~P~~~~~~~~l~~~ 159 (254)
.+.+++.+++.... +... +..+.++ ..-+....... ....|..+|+.+.+.... ..+.. ...+...
T Consensus 235 ~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~dg~i~~~d~~~~~~~~~~~~~~~---~~~~~~~ 311 (433)
T 3bws_A 235 DISVIDRKTKLEIRKTDKIGLPRGLLLSKDGKELYIAQFSASNQESGGGRLGIYSMDKEKLIDTIGPPGN---KRHIVSG 311 (433)
T ss_dssp EEEEEETTTTEEEEECCCCSEEEEEEECTTSSEEEEEEEESCTTCSCCEEEEEEETTTTEEEEEEEEEEC---EEEEEEC
T ss_pred cEEEEECCCCcEEEEecCCCCceEEEEcCCCCEEEEEECCCCccccCCCeEEEEECCCCcEEeeccCCCC---cceEEEC
Confidence 67788887764322 1111 1233332 23333332111 124788899987754332 22221 1122222
Q ss_pred -CC-eEEEEecCCCCEEEEEEECCCcceEEEEEecCCCcceeeEEEEeCCeEEEEeCcccc------------CCEEEEE
Q 039648 160 -ED-SLSIVIPDAEQCFEIWVMNDNKCWAKHLTLGPFFNFRINFGFWKNDAFFIESNSRIY------------GGCLFLH 225 (254)
Q Consensus 160 -~g-~L~~~~~~~~~~~~IW~l~~~~~W~~~~~i~~~~~~~~~~~~~~~g~i~l~~~~~~~------------~~~~~~y 225 (254)
+| .|.+.. .....+.+|-++. . .....++... -..-+.+..+|..++....... ++.+..|
T Consensus 312 ~~g~~l~~~~-~~~~~v~v~d~~~-~--~~~~~~~~~~-~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~g~~dg~v~~~ 386 (433)
T 3bws_A 312 NTENKIYVSD-MCCSKIEVYDLKE-K--KVQKSIPVFD-KPNTIALSPDGKYLYVSCRGPNHPTEGYLKKGLVLGKVYVI 386 (433)
T ss_dssp SSTTEEEEEE-TTTTEEEEEETTT-T--EEEEEEECSS-SEEEEEECTTSSEEEEEECCCCCTTTCTTSCCSSCCEEEEE
T ss_pred CCCCEEEEEe-cCCCEEEEEECCC-C--cEEEEecCCC-CCCeEEEcCCCCEEEEEecCCCccccccccccccceEEEEE
Confidence 34 455554 3467899999885 2 2233343222 2234555667764444331000 2489999
Q ss_pred ECCCCcEEE
Q 039648 226 EHRTKEIKN 234 (254)
Q Consensus 226 d~~t~~~~~ 234 (254)
|+++++...
T Consensus 387 d~~~~~~~~ 395 (433)
T 3bws_A 387 DTTTDTVKE 395 (433)
T ss_dssp ETTTTEEEE
T ss_pred ECCCCcEEE
Confidence 999876543
No 69
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=31.90 E-value=1.8e+02 Score=22.57 Aligned_cols=186 Identities=9% Similarity=0.065 Sum_probs=88.9
Q ss_pred cEEEEcCcccccccCCCCCCCCCCCCCCCCcceEEEEeeCCCCCeEEEEEeeeeccccccCCCcCeEEEEEccCCceeec
Q 039648 26 RLTIWNPATREFRNLPNYKYCNSSNRLIPPSTFICLESDPINNDFKLLFVHNLWNEKRKRYGKVPNVQVYGFRTNSWREV 105 (254)
Q Consensus 26 ~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~g~g~d~~~~~yKVv~~~~~~~~~~~~~~~~~~~~Vys~~~~~Wr~~ 105 (254)
.++++||.+++...+..+... + ......++.+|+..+. +..... ...+.+|+.. +..+.+
T Consensus 47 ~i~~~d~~~g~~~~~~~~~~~---~---~~~~~~~i~~~~~~g~--l~v~~~-----------~~~l~~~d~~-g~~~~~ 106 (314)
T 1pjx_A 47 EILRIDLKTGKKTVICKPEVN---G---YGGIPAGCQCDRDANQ--LFVADM-----------RLGLLVVQTD-GTFEEI 106 (314)
T ss_dssp EEEEECTTTCCEEEEECCEET---T---EECCEEEEEECSSSSE--EEEEET-----------TTEEEEEETT-SCEEEC
T ss_pred EEEEEeCCCCcEEEEEecccC---C---CCCCCceEEEecCCCc--EEEEEC-----------CCCEEEEeCC-CCEEEE
Confidence 479999999988765431110 0 0123456777765221 222110 1145566665 554443
Q ss_pred -ccc--------CceEEEE--EEEEEEEecCC------------CceEEEEEECCCcceeEecCCCCCCceeEEEEe---
Q 039648 106 -HGH--------QLDRYFK--VCYWLVIADTR------------DLKVILSFHMDNEVFEEIKIPPHVNYYSSISLY--- 159 (254)
Q Consensus 106 -~~~--------p~~v~~~--~lyWl~~~~~~------------~~~~IvsfD~~~e~~~~i~~P~~~~~~~~l~~~--- 159 (254)
... +..+.++ --.|++..... ....|..+|.+ +++..+.-... ....+...
T Consensus 107 ~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~~~~~~~~--~~~~i~~~~~~ 183 (314)
T 1pjx_A 107 AKKDSEGRRMQGCNDCAFDYEGNLWITAPAGEVAPADYTRSMQEKFGSIYCFTTD-GQMIQVDTAFQ--FPNGIAVRHMN 183 (314)
T ss_dssp CSBCTTSCBCBCCCEEEECTTSCEEEEECBCBCTTSCCCBTTSSSCEEEEEECTT-SCEEEEEEEES--SEEEEEEEECT
T ss_pred EeccCCCccccCCcCEEECCCCCEEEEecCcccccccccccccCCCCeEEEECCC-CCEEEeccCCC--CcceEEEeccc
Confidence 211 1455554 22345443210 12478999987 55544311000 11223322
Q ss_pred --CC-eEEEEecCCCCEEEEEEECCCcceEEEEEecCCC-cc-eee--EEEEeCCeEEEEeCccccCCEEEEEECCCCc-
Q 039648 160 --ED-SLSIVIPDAEQCFEIWVMNDNKCWAKHLTLGPFF-NF-RIN--FGFWKNDAFFIESNSRIYGGCLFLHEHRTKE- 231 (254)
Q Consensus 160 --~g-~L~~~~~~~~~~~~IW~l~~~~~W~~~~~i~~~~-~~-~~~--~~~~~~g~i~l~~~~~~~~~~~~~yd~~t~~- 231 (254)
+| .|.+.. .....+.+|-++..........+.... .. ..| +.+..+|.+++.... +..+..||+++++
T Consensus 184 d~dg~~l~v~~-~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~i~~d~~G~l~v~~~~---~~~i~~~d~~~g~~ 259 (314)
T 1pjx_A 184 DGRPYQLIVAE-TPTKKLWSYDIKGPAKIENKKVWGHIPGTHEGGADGMDFDEDNNLLVANWG---SSHIEVFGPDGGQP 259 (314)
T ss_dssp TSCEEEEEEEE-TTTTEEEEEEEEETTEEEEEEEEEECCCCSSCEEEEEEEBTTCCEEEEEET---TTEEEEECTTCBSC
T ss_pred CCCCCEEEEEE-CCCCeEEEEECCCCCccccceEEEECCCCCCCCCCceEECCCCCEEEEEcC---CCEEEEEcCCCCcE
Confidence 34 455444 335677777665223332221111111 11 234 444567888887642 5789999998543
Q ss_pred EEEEEEc
Q 039648 232 IKNLQVT 238 (254)
Q Consensus 232 ~~~~~~~ 238 (254)
.+.+...
T Consensus 260 ~~~~~~~ 266 (314)
T 1pjx_A 260 KMRIRCP 266 (314)
T ss_dssp SEEEECS
T ss_pred eEEEeCC
Confidence 4444443
No 70
>1i2h_A PSD-ZIP45(homer-1C/VESL-1L); enabled VAsp homology 1 domain, signaling protein; 1.80A {Rattus norvegicus} SCOP: b.55.1.4
Probab=31.65 E-value=62 Score=24.22 Aligned_cols=39 Identities=13% Similarity=0.234 Sum_probs=27.9
Q ss_pred cEEEEcCccc-ccccCCCCCCCCCCCCCCCCcceEEEEeeCCCCCeEEEEEe
Q 039648 26 RLTIWNPATR-EFRNLPNYKYCNSSNRLIPPSTFICLESDPINNDFKLLFVH 76 (254)
Q Consensus 26 ~~~V~NP~T~-~~~~LP~~~~~~~~~~~~~~~~~~g~g~d~~~~~yKVv~~~ 76 (254)
++++.+|.|+ +|+. .... ...+.|-+|+..+.|+|+.+.
T Consensus 17 ~Vm~~D~~tk~~WvP--~g~~----------~~~V~i~~d~~rnsyRIvg~~ 56 (168)
T 1i2h_A 17 HVFQIDPNTKKNWVP--TSKH----------AVTVSYFYDSTRNVYRIISLD 56 (168)
T ss_dssp EEEEECTTSSCCSEE--SCSS----------CEEEEEEEETTTTEEEEEEEE
T ss_pred EEEEECCCCCCceee--cCCC----------CeEEEEEEcCCCCEEEEEEcc
Confidence 4689999997 8853 2211 125677789998999998864
No 71
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=30.82 E-value=2.1e+02 Score=22.96 Aligned_cols=133 Identities=5% Similarity=0.017 Sum_probs=79.8
Q ss_pred CeEEEEEccCCc-eeeccccC----ceEEEE--EEEEEEEecCCCceEEEEEECCCc-ceeEecCCCCCCceeEEEEeCC
Q 039648 90 PNVQVYGFRTNS-WREVHGHQ----LDRYFK--VCYWLVIADTRDLKVILSFHMDNE-VFEEIKIPPHVNYYSSISLYED 161 (254)
Q Consensus 90 ~~~~Vys~~~~~-Wr~~~~~p----~~v~~~--~lyWl~~~~~~~~~~IvsfD~~~e-~~~~i~~P~~~~~~~~l~~~~g 161 (254)
..+.+++.+++. =+.+...+ .++.+. .+|-++... ..+..+|.++- .-..++.|.. ...|..-++
T Consensus 65 S~v~~vD~~Tgkv~~~~~l~~~~FgeGit~~g~~ly~ltw~~----~~v~v~D~~t~~~~~ti~~~~e---G~glt~dg~ 137 (262)
T 3nol_A 65 SSIRKVDIESGKTLQQIELGKRYFGEGISDWKDKIVGLTWKN----GLGFVWNIRNLRQVRSFNYDGE---GWGLTHNDQ 137 (262)
T ss_dssp EEEEEECTTTCCEEEEEECCTTCCEEEEEEETTEEEEEESSS----SEEEEEETTTCCEEEEEECSSC---CCCEEECSS
T ss_pred ceEEEEECCCCcEEEEEecCCccceeEEEEeCCEEEEEEeeC----CEEEEEECccCcEEEEEECCCC---ceEEecCCC
Confidence 467888888864 33333332 456555 888776543 37999999865 4456776653 244555567
Q ss_pred eEEEEecCCCCEEEEEEECCCcceEEEEEecCCC---cceee--EEEEeCCeEEEEeCccccCCEEEEEECCCCcE-EEE
Q 039648 162 SLSIVIPDAEQCFEIWVMNDNKCWAKHLTLGPFF---NFRIN--FGFWKNDAFFIESNSRIYGGCLFLHEHRTKEI-KNL 235 (254)
Q Consensus 162 ~L~~~~~~~~~~~~IW~l~~~~~W~~~~~i~~~~---~~~~~--~~~~~~g~i~l~~~~~~~~~~~~~yd~~t~~~-~~~ 235 (254)
.|.+... .. .||+++- ..=..+.+|.... .+..+ +. +.+|+|+..... ...+...|++|++. +.+
T Consensus 138 ~L~~SdG--s~--~i~~iDp-~T~~v~~~I~V~~~g~~~~~lNELe-~~~G~lyan~w~---~~~I~vIDp~tG~V~~~I 208 (262)
T 3nol_A 138 YLIMSDG--TP--VLRFLDP-ESLTPVRTITVTAHGEELPELNELE-WVDGEIFANVWQ---TNKIVRIDPETGKVTGII 208 (262)
T ss_dssp CEEECCS--SS--EEEEECT-TTCSEEEEEECEETTEECCCEEEEE-EETTEEEEEETT---SSEEEEECTTTCBEEEEE
T ss_pred EEEEECC--CC--eEEEEcC-CCCeEEEEEEeccCCccccccceeE-EECCEEEEEEcc---CCeEEEEECCCCcEEEEE
Confidence 7776653 22 4888885 2223444454321 11111 23 347888877753 77899999999876 445
Q ss_pred EEc
Q 039648 236 QVT 238 (254)
Q Consensus 236 ~~~ 238 (254)
...
T Consensus 209 d~~ 211 (262)
T 3nol_A 209 DLN 211 (262)
T ss_dssp ECT
T ss_pred ECC
Confidence 553
No 72
>2lyd_A Decapping protein 1; DCP1, XRN1, transcription-protein binding complex; NMR {Drosophila melanogaster}
Probab=30.74 E-value=72 Score=22.85 Aligned_cols=29 Identities=10% Similarity=0.126 Sum_probs=21.2
Q ss_pred eEEEEeCccccCCEEEEEECCCCcEEEEEEcCc
Q 039648 208 AFFIESNSRIYGGCLFLHEHRTKEIKNLQVTNP 240 (254)
Q Consensus 208 ~i~l~~~~~~~~~~~~~yd~~t~~~~~~~~~~~ 240 (254)
+|+.... .-.++.||..+++|++.++.|.
T Consensus 30 ~Il~~a~----~v~vY~f~~~~~~W~K~~iEG~ 58 (134)
T 2lyd_A 30 EIVDSSS----HVAFYTFNSSQNEWEKTDVEGA 58 (134)
T ss_dssp EEEEEEE----EEEEEEEETTTTEEEEEEEEEE
T ss_pred HHHhhCC----eEEEEEecCCcCceeEcCCcce
Confidence 3555544 4467778888999999998886
No 73
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=30.45 E-value=2.1e+02 Score=22.82 Aligned_cols=60 Identities=8% Similarity=0.054 Sum_probs=33.1
Q ss_pred CCCCEEEEEEECCCcceEEEEEecCCCcceeeEEEEeCCeEEEEeCccccCCEEEEEECCCCcE
Q 039648 169 DAEQCFEIWVMNDNKCWAKHLTLGPFFNFRINFGFWKNDAFFIESNSRIYGGCLFLHEHRTKEI 232 (254)
Q Consensus 169 ~~~~~~~IW~l~~~~~W~~~~~i~~~~~~~~~~~~~~~g~i~l~~~~~~~~~~~~~yd~~t~~~ 232 (254)
..+..+.||.++. +.......+.--.....-+.+..++.+++.... ++.+.+||+++++.
T Consensus 55 s~D~~v~vW~~~~-~~~~~~~~l~gh~~~v~~~~~~~~~~~l~s~s~---D~~i~lWd~~~~~~ 114 (321)
T 3ow8_A 55 SLDDLVKVWKWRD-ERLDLQWSLEGHQLGVVSVDISHTLPIAASSSL---DAHIRLWDLENGKQ 114 (321)
T ss_dssp ETTSCEEEEEEET-TEEEEEEEECCCSSCEEEEEECSSSSEEEEEET---TSEEEEEETTTTEE
T ss_pred cCCCCEEEEECCC-CCeeeeeeeccCCCCEEEEEECCCCCEEEEEeC---CCcEEEEECCCCCE
Confidence 3477899999886 333333333311111122334455555555442 67888888887643
No 74
>1rmk_A MU-O-conotoxin mrvib; beta sheet, cystine knot; NMR {Conus marmoreus} SCOP: g.3.6.1
Probab=29.74 E-value=7.4 Score=19.96 Aligned_cols=13 Identities=38% Similarity=0.488 Sum_probs=9.9
Q ss_pred cEEeccCceEEEE
Q 039648 8 KFVGYHDGLFCIM 20 (254)
Q Consensus 8 ~i~~scnGLlcl~ 20 (254)
-++..|.||+|+.
T Consensus 15 G~i~CC~GLIC~~ 27 (31)
T 1rmk_A 15 GFVYCCPGLICGP 27 (31)
T ss_dssp CCCEESTTCCBCS
T ss_pred EEEEecCCceEee
Confidence 4567899999863
No 75
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=29.50 E-value=2e+02 Score=22.32 Aligned_cols=69 Identities=10% Similarity=0.089 Sum_probs=37.4
Q ss_pred CCeEEEEecCCCCEEEEEEECCCcceEEEEEecCCCcceeeEEEEeCCeEEEEeCccccCCEEEEEECCCCcEE
Q 039648 160 EDSLSIVIPDAEQCFEIWVMNDNKCWAKHLTLGPFFNFRINFGFWKNDAFFIESNSRIYGGCLFLHEHRTKEIK 233 (254)
Q Consensus 160 ~g~L~~~~~~~~~~~~IW~l~~~~~W~~~~~i~~~~~~~~~~~~~~~g~i~l~~~~~~~~~~~~~yd~~t~~~~ 233 (254)
+|.+.++. .....+.+|-++. ........+........-+.+..++..++.... ++.+..||+++++..
T Consensus 108 ~~~~l~~~-~~d~~i~~~d~~~-~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~---dg~v~~~d~~~~~~~ 176 (337)
T 1gxr_A 108 DGCTLIVG-GEASTLSIWDLAA-PTPRIKAELTSSAPACYALAISPDSKVCFSCCS---DGNIAVWDLHNQTLV 176 (337)
T ss_dssp TSSEEEEE-ESSSEEEEEECCC-C--EEEEEEECSSSCEEEEEECTTSSEEEEEET---TSCEEEEETTTTEEE
T ss_pred CCCEEEEE-cCCCcEEEEECCC-CCcceeeecccCCCceEEEEECCCCCEEEEEeC---CCcEEEEeCCCCcee
Confidence 34433333 2367899999886 333334334322112233445556665554432 678999999887543
No 76
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=29.25 E-value=2e+02 Score=22.37 Aligned_cols=101 Identities=10% Similarity=0.094 Sum_probs=55.3
Q ss_pred EEEEEECCC-ccee-----EecCCCCCCceeEEEEe-CCe-EEEEecCCCCEEEEEEECC-CcceEEEEEecCCC-c---
Q 039648 130 VILSFHMDN-EVFE-----EIKIPPHVNYYSSISLY-EDS-LSIVIPDAEQCFEIWVMND-NKCWAKHLTLGPFF-N--- 196 (254)
Q Consensus 130 ~IvsfD~~~-e~~~-----~i~~P~~~~~~~~l~~~-~g~-L~~~~~~~~~~~~IW~l~~-~~~W~~~~~i~~~~-~--- 196 (254)
.|..+|+.+ ++.. .+..+... ....+... +|. |.+.. .....+.+|.++. ...+.....+.... .
T Consensus 152 ~v~~~d~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~pdg~~l~~~~-~~~~~i~~~~~~~~~g~~~~~~~~~~~~~~~~~ 229 (343)
T 1ri6_A 152 RICLFTVSDDGHLVAQDPAEVTTVEGA-GPRHMVFHPNEQYAYCVN-ELNSSVDVWELKDPHGNIECVQTLDMMPENFSD 229 (343)
T ss_dssp EEEEEEECTTSCEEEEEEEEEECSTTC-CEEEEEECTTSSEEEEEE-TTTTEEEEEESSCTTSCCEEEEEEECSCTTCCS
T ss_pred EEEEEEecCCCceeeecccccccCCCC-CcceEEECCCCCEEEEEe-CCCCEEEEEEecCCCCcEEEEeeccccCccccc
Confidence 688899887 5554 23333322 11223322 454 44444 3467899999975 45555444443221 1
Q ss_pred cee--eEEEEeCCeEEE-EeCccccCCEEEEEECC--CCcEEEE
Q 039648 197 FRI--NFGFWKNDAFFI-ESNSRIYGGCLFLHEHR--TKEIKNL 235 (254)
Q Consensus 197 ~~~--~~~~~~~g~i~l-~~~~~~~~~~~~~yd~~--t~~~~~~ 235 (254)
... -+.+..+|..++ .... +..+..||++ +++.+.+
T Consensus 230 ~~~~~~i~~s~dg~~l~v~~~~---~~~i~v~d~~~~~~~~~~~ 270 (343)
T 1ri6_A 230 TRWAADIHITPDGRHLYACDRT---ASLITVFSVSEDGSVLSKE 270 (343)
T ss_dssp CCCEEEEEECTTSSEEEEEETT---TTEEEEEEECTTSCCEEEE
T ss_pred cCCccceEECCCCCEEEEEecC---CCEEEEEEEcCCCCceEEe
Confidence 112 255566776444 4432 6789999998 5556555
No 77
>2xzh_A Clathrin heavy chain 1; endocytosis, endocytosis inhibition; HET: VH2; 1.69A {Homo sapiens} PDB: 2xzg_A* 3gc3_B 1utc_A 3gd1_I 1c9i_A 1c9l_A
Probab=28.99 E-value=1.4e+02 Score=25.22 Aligned_cols=39 Identities=15% Similarity=0.269 Sum_probs=28.5
Q ss_pred eeeEEEE---eCCeEEEEeCccccCCEEEEEECCCCcEEEE-EEcCc
Q 039648 198 RINFGFW---KNDAFFIESNSRIYGGCLFLHEHRTKEIKNL-QVTNP 240 (254)
Q Consensus 198 ~~~~~~~---~~g~i~l~~~~~~~~~~~~~yd~~t~~~~~~-~~~~~ 240 (254)
..|+++- +.|-|++.+. .+-++.||++|++.-.. +|.++
T Consensus 260 DFPVamqvs~kygviyviTK----~G~ihlyDleTgt~i~~nrIS~d 302 (365)
T 2xzh_A 260 DFPVAMQISEKHDVVFLITK----YGYIHLYDLETGTCIYMNRISGE 302 (365)
T ss_dssp CCEEEEEEETTTTEEEEEET----TSEEEEEETTTCCEEEEEECCSS
T ss_pred CceEEEEecccCCEEEEEeC----CcEEEEEEcccCcEEEEeccCCC
Confidence 4676653 4677888887 78899999999976544 55554
No 78
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=28.57 E-value=3.4e+02 Score=24.80 Aligned_cols=65 Identities=9% Similarity=0.142 Sum_probs=39.9
Q ss_pred CeEEEEecCCCCEEEEEEECCCcceEEEEEecCCCcceeeEEEEeC--CeEEEEeCccccCCEEEEEECCCC
Q 039648 161 DSLSIVIPDAEQCFEIWVMNDNKCWAKHLTLGPFFNFRINFGFWKN--DAFFIESNSRIYGGCLFLHEHRTK 230 (254)
Q Consensus 161 g~L~~~~~~~~~~~~IW~l~~~~~W~~~~~i~~~~~~~~~~~~~~~--g~i~l~~~~~~~~~~~~~yd~~t~ 230 (254)
|.+.+.+ .....+.||-++. ..|.....+..-.....-+.+..+ +..++.... ++.+.+||++++
T Consensus 67 ~~~l~s~-s~Dg~I~vwd~~~-~~~~~~~~~~~h~~~V~~v~~sp~~~~~~l~sgs~---dg~I~vwdl~~~ 133 (753)
T 3jro_A 67 GTILASC-SYDGKVLIWKEEN-GRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASS---DGKVSVVEFKEN 133 (753)
T ss_dssp CSEEEEE-ETTSCEEEEEEET-TEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEET---TSEEEEEECCSS
T ss_pred CCEEEEE-eCCCeEEEEECCC-CcccccccccCCCCCeEEEEECCCCCCCEEEEEeC---CCcEEEEEeecC
Confidence 4444444 2367899999986 667776666532222233444455 665555442 788999999877
No 79
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=28.32 E-value=2e+02 Score=21.95 Aligned_cols=191 Identities=13% Similarity=0.086 Sum_probs=96.0
Q ss_pred EeccCceEEEEEcCCccEEEEcCcccccccCCCCCCCCCCCCCCCCcceEEEEeeCCCCCeEEEEEeeeeccccccCCCc
Q 039648 10 VGYHDGLFCIMQSSTNRLTIWNPATREFRNLPNYKYCNSSNRLIPPSTFICLESDPINNDFKLLFVHNLWNEKRKRYGKV 89 (254)
Q Consensus 10 ~~scnGLlcl~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~g~g~d~~~~~yKVv~~~~~~~~~~~~~~~~ 89 (254)
.-.-+|-+.+....+..+.++||. ++...++.+... ....++.+|+... + .+... ..
T Consensus 21 ~~d~~g~l~v~~~~~~~v~~~d~~-~~~~~~~~~~~~---------~~~~~i~~~~~g~---l-~v~~~---------~~ 77 (299)
T 2z2n_A 21 TVSDKGKVWITQHKANMISCINLD-GKITEYPLPTPD---------AKVMCLTISSDGE---V-WFTEN---------AA 77 (299)
T ss_dssp EECTTSCEEEEETTTTEEEEECTT-CCEEEEECSSTT---------CCEEEEEECTTSC---E-EEEET---------TT
T ss_pred EECCCCCEEEEecCCCcEEEEcCC-CCeEEecCCccc---------CceeeEEECCCCC---E-EEeCC---------CC
Confidence 335577777666543357999999 777665432111 2345667776432 1 11110 01
Q ss_pred CeEEEEEccCCceeecccc-----CceEEEE--EEEEEEEecCCCceEEEEEECCCcceeEecCCCCCCceeEEEEe-CC
Q 039648 90 PNVQVYGFRTNSWREVHGH-----QLDRYFK--VCYWLVIADTRDLKVILSFHMDNEVFEEIKIPPHVNYYSSISLY-ED 161 (254)
Q Consensus 90 ~~~~Vys~~~~~Wr~~~~~-----p~~v~~~--~lyWl~~~~~~~~~~IvsfD~~~e~~~~i~~P~~~~~~~~l~~~-~g 161 (254)
-.+.+|+.. +..+.+..+ |.++.++ --.|++... ...|..+|. +.++..+..|........+... +|
T Consensus 78 ~~i~~~~~~-g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~---~~~i~~~d~-~g~~~~~~~~~~~~~~~~i~~~~~g 152 (299)
T 2z2n_A 78 NKIGRITKK-GIIKEYTLPNPDSAPYGITEGPNGDIWFTEMN---GNRIGRITD-DGKIREYELPNKGSYPSFITLGSDN 152 (299)
T ss_dssp TEEEEECTT-SCEEEEECSSTTCCEEEEEECTTSCEEEEETT---TTEEEEECT-TCCEEEEECSSTTCCEEEEEECTTS
T ss_pred CeEEEECCC-CcEEEEeCCCcCCCceeeEECCCCCEEEEecC---CceEEEECC-CCCEEEecCCCCCCCCceEEEcCCC
Confidence 123333332 233332211 2445554 333454332 237899999 6667666555432222344444 66
Q ss_pred eEEEEecCCCCEEEEEEECCCcceEEEEEecCCCcceeeE--EEEeCCeEEEEeCccccCCEEEEEECCCCcEEEEEEc
Q 039648 162 SLSIVIPDAEQCFEIWVMNDNKCWAKHLTLGPFFNFRINF--GFWKNDAFFIESNSRIYGGCLFLHEHRTKEIKNLQVT 238 (254)
Q Consensus 162 ~L~~~~~~~~~~~~IW~l~~~~~W~~~~~i~~~~~~~~~~--~~~~~g~i~l~~~~~~~~~~~~~yd~~t~~~~~~~~~ 238 (254)
.|.+... .... |++++....... +.++. ....|. .+..+|.+++.... ...+..||+ +++++.+...
T Consensus 153 ~l~v~~~-~~~~--i~~~~~~g~~~~-~~~~~--~~~~~~~i~~~~~g~l~v~~~~---~~~i~~~~~-~g~~~~~~~~ 221 (299)
T 2z2n_A 153 ALWFTEN-QNNA--IGRITESGDITE-FKIPT--PASGPVGITKGNDDALWFVEII---GNKIGRITT-SGEITEFKIP 221 (299)
T ss_dssp CEEEEET-TTTE--EEEECTTCCEEE-EECSS--TTCCEEEEEECTTSSEEEEETT---TTEEEEECT-TCCEEEEECS
T ss_pred CEEEEeC-CCCE--EEEEcCCCcEEE-eeCCC--CCCcceeEEECCCCCEEEEccC---CceEEEECC-CCcEEEEECC
Confidence 7776652 2333 444443233332 22221 122343 44557788777652 568999999 7777765443
No 80
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=28.10 E-value=2.2e+02 Score=22.37 Aligned_cols=69 Identities=9% Similarity=0.033 Sum_probs=0.0
Q ss_pred CCeEEEEecCCCCEEEEEEECCCcceEEEEEecCCCcceeeEEEEeCCeEEEEeCccccCCEEEEEECCCCcEEEE
Q 039648 160 EDSLSIVIPDAEQCFEIWVMNDNKCWAKHLTLGPFFNFRINFGFWKNDAFFIESNSRIYGGCLFLHEHRTKEIKNL 235 (254)
Q Consensus 160 ~g~L~~~~~~~~~~~~IW~l~~~~~W~~~~~i~~~~~~~~~~~~~~~g~i~l~~~~~~~~~~~~~yd~~t~~~~~~ 235 (254)
+|.+.++... ...+.||-++. ......+..-.....-+.+..++..++.... ++.+.+||+++++....
T Consensus 43 ~~~~l~~~~~-dg~i~vwd~~~---~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~---dg~i~iwd~~~~~~~~~ 111 (369)
T 3zwl_B 43 EGDLLFSCSK-DSSASVWYSLN---GERLGTLDGHTGTIWSIDVDCFTKYCVTGSA---DYSIKLWDVSNGQCVAT 111 (369)
T ss_dssp TSCEEEEEES-SSCEEEEETTT---CCEEEEECCCSSCEEEEEECTTSSEEEEEET---TTEEEEEETTTCCEEEE
T ss_pred CCCEEEEEeC-CCEEEEEeCCC---chhhhhhhhcCCcEEEEEEcCCCCEEEEEeC---CCeEEEEECCCCcEEEE
No 81
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=27.69 E-value=2.1e+02 Score=21.97 Aligned_cols=198 Identities=11% Similarity=0.126 Sum_probs=102.2
Q ss_pred ccCceEEEEEcCCccEEEEcCcccccccCCCCCCCCCCCCCCCCcceEEEEeeCCCCCeEEEEEeeeeccccccCCCcCe
Q 039648 12 YHDGLFCIMQSSTNRLTIWNPATREFRNLPNYKYCNSSNRLIPPSTFICLESDPINNDFKLLFVHNLWNEKRKRYGKVPN 91 (254)
Q Consensus 12 scnGLlcl~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~g~g~d~~~~~yKVv~~~~~~~~~~~~~~~~~~ 91 (254)
+.+|-+.+.+.....+.+|||..+....++...... .......++.++...+. ++... . . ....
T Consensus 38 ~~~g~l~v~~~~~~~i~~~d~~g~~~~~~~~~~~~~-----~~~~~p~~i~~~~~~g~--l~v~~-~-~-------~~~~ 101 (286)
T 1q7f_A 38 NAQNDIIVADTNNHRIQIFDKEGRFKFQFGECGKRD-----SQLLYPNRVAVVRNSGD--IIVTE-R-S-------PTHQ 101 (286)
T ss_dssp CTTCCEEEEEGGGTEEEEECTTSCEEEEECCBSSST-----TCBSSEEEEEEETTTTE--EEEEE-C-G-------GGCE
T ss_pred CCCCCEEEEECCCCEEEEECCCCcEEEEecccCCCc-----ccccCceEEEEEcCCCe--EEEEc-C-C-------CCCE
Confidence 456776666544345799999877666665432210 01123467777533332 22211 0 0 0124
Q ss_pred EEEEEccCCceeecccc----CceEEEE---EEEEEEEecCCCceEEEEEECCCcceeEecCCCCCCceeEEEEe-CCeE
Q 039648 92 VQVYGFRTNSWREVHGH----QLDRYFK---VCYWLVIADTRDLKVILSFHMDNEVFEEIKIPPHVNYYSSISLY-EDSL 163 (254)
Q Consensus 92 ~~Vys~~~~~Wr~~~~~----p~~v~~~---~lyWl~~~~~~~~~~IvsfD~~~e~~~~i~~P~~~~~~~~l~~~-~g~L 163 (254)
+.+|+.....-+.+... |.++.++ .+ |++... ...|..+|.+.+....+..+........+... +|.|
T Consensus 102 i~~~d~~g~~~~~~~~~~~~~~~~i~~~~~g~l-~v~~~~---~~~i~~~~~~g~~~~~~~~~~~~~~p~~i~~~~~g~l 177 (286)
T 1q7f_A 102 IQIYNQYGQFVRKFGATILQHPRGVTVDNKGRI-IVVECK---VMRVIIFDQNGNVLHKFGCSKHLEFPNGVVVNDKQEI 177 (286)
T ss_dssp EEEECTTSCEEEEECTTTCSCEEEEEECTTSCE-EEEETT---TTEEEEECTTSCEEEEEECTTTCSSEEEEEECSSSEE
T ss_pred EEEECCCCcEEEEecCccCCCceEEEEeCCCCE-EEEECC---CCEEEEEcCCCCEEEEeCCCCccCCcEEEEECCCCCE
Confidence 56666333222223221 2455554 44 444322 23789999887766666443322122334443 5777
Q ss_pred EEEecCCCCEEEEEEECCCcceEEEEEecCCCcceee--EEEEeCCeEEEEeCccccCC-EEEEEECCCCcEEEEEE
Q 039648 164 SIVIPDAEQCFEIWVMNDNKCWAKHLTLGPFFNFRIN--FGFWKNDAFFIESNSRIYGG-CLFLHEHRTKEIKNLQV 237 (254)
Q Consensus 164 ~~~~~~~~~~~~IW~l~~~~~W~~~~~i~~~~~~~~~--~~~~~~g~i~l~~~~~~~~~-~~~~yd~~t~~~~~~~~ 237 (254)
.+... ....+.+|-.+. .. +..+........| +++..+|.+++.... +. .+..||.+.+.++.+..
T Consensus 178 ~v~~~-~~~~i~~~~~~g--~~--~~~~~~~g~~~~p~~i~~d~~G~l~v~~~~---~~~~i~~~~~~g~~~~~~~~ 246 (286)
T 1q7f_A 178 FISDN-RAHCVKVFNYEG--QY--LRQIGGEGITNYPIGVGINSNGEILIADNH---NNFNLTIFTQDGQLISALES 246 (286)
T ss_dssp EEEEG-GGTEEEEEETTC--CE--EEEESCTTTSCSEEEEEECTTCCEEEEECS---SSCEEEEECTTSCEEEEEEE
T ss_pred EEEEC-CCCEEEEEcCCC--CE--EEEEccCCccCCCcEEEECCCCCEEEEeCC---CCEEEEEECCCCCEEEEEcc
Confidence 66653 356777776542 22 2233321112344 445567888888762 43 89999988777766644
No 82
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=27.03 E-value=2.7e+02 Score=23.16 Aligned_cols=182 Identities=8% Similarity=0.020 Sum_probs=88.6
Q ss_pred ccEEEEcCcccccccCCCCCCCCCCCCCCCCcceEEEEeeCCCCCeEEEEEeeeeccccccCCCcCeEEEEEccCCceee
Q 039648 25 NRLTIWNPATREFRNLPNYKYCNSSNRLIPPSTFICLESDPINNDFKLLFVHNLWNEKRKRYGKVPNVQVYGFRTNSWRE 104 (254)
Q Consensus 25 ~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~g~g~d~~~~~yKVv~~~~~~~~~~~~~~~~~~~~Vys~~~~~Wr~ 104 (254)
.++.+||..+++.+.|.... .......+.|..+ +++.... + .....+.+++.+++..+.
T Consensus 159 ~~i~i~d~~g~~~~~l~~~~-----------~~v~~~~~Spdg~--~la~~s~---~-----~~~~~i~~~d~~tg~~~~ 217 (415)
T 2hqs_A 159 YELRVSDYDGYNQFVVHRSP-----------QPLMSPAWSPDGS--KLAYVTF---E-----SGRSALVIQTLANGAVRQ 217 (415)
T ss_dssp EEEEEEETTSCSCEEEEEES-----------SCEEEEEECTTSS--EEEEEEC---T-----TSSCEEEEEETTTCCEEE
T ss_pred ceEEEEcCCCCCCEEEeCCC-----------CcceeeEEcCCCC--EEEEEEe---c-----CCCcEEEEEECCCCcEEE
Confidence 46899999877666554221 1234555655433 2332221 1 123467888888876665
Q ss_pred ccccC---ceEEEE----EEEEEEEecCCCceEEEEEECCCcceeEecCCCCCCceeEEEEe-CCe-EEEEecCCCCEEE
Q 039648 105 VHGHQ---LDRYFK----VCYWLVIADTRDLKVILSFHMDNEVFEEIKIPPHVNYYSSISLY-EDS-LSIVIPDAEQCFE 175 (254)
Q Consensus 105 ~~~~p---~~v~~~----~lyWl~~~~~~~~~~IvsfD~~~e~~~~i~~P~~~~~~~~l~~~-~g~-L~~~~~~~~~~~~ 175 (254)
+...+ ..+.++ .+.+....+ ....|..+|+++.+...+..... ....+.-. +|+ |+.... ......
T Consensus 218 l~~~~~~~~~~~~spdg~~la~~~~~~--g~~~i~~~d~~~~~~~~l~~~~~--~~~~~~~spdg~~l~~~s~-~~g~~~ 292 (415)
T 2hqs_A 218 VASFPRHNGAPAFSPDGSKLAFALSKT--GSLNLYVMDLASGQIRQVTDGRS--NNTEPTWFPDSQNLAFTSD-QAGRPQ 292 (415)
T ss_dssp EECCSSCEEEEEECTTSSEEEEEECTT--SSCEEEEEETTTCCEEECCCCSS--CEEEEEECTTSSEEEEEEC-TTSSCE
T ss_pred eecCCCcccCEEEcCCCCEEEEEEecC--CCceEEEEECCCCCEEeCcCCCC--cccceEECCCCCEEEEEEC-CCCCcE
Confidence 54332 122221 344433222 22468889998887655432211 11222222 444 554442 233456
Q ss_pred EEEECC-CcceEEEEEecCCCcceeeEEEEeCCeEEEEeCccccCCEEEEEECCCCcEEEE
Q 039648 176 IWVMND-NKCWAKHLTLGPFFNFRINFGFWKNDAFFIESNSRIYGGCLFLHEHRTKEIKNL 235 (254)
Q Consensus 176 IW~l~~-~~~W~~~~~i~~~~~~~~~~~~~~~g~i~l~~~~~~~~~~~~~yd~~t~~~~~~ 235 (254)
||.++- ... ..++........-+.+..+|+.++..........+..+|+++++.+.+
T Consensus 293 i~~~d~~~~~---~~~l~~~~~~~~~~~~spdG~~l~~~~~~~g~~~i~~~d~~~~~~~~l 350 (415)
T 2hqs_A 293 VYKVNINGGA---PQRITWEGSQNQDADVSSDGKFMVMVSSNGGQQHIAKQDLATGGVQVL 350 (415)
T ss_dssp EEEEETTSSC---CEECCCSSSEEEEEEECTTSSEEEEEEECSSCEEEEEEETTTCCEEEC
T ss_pred EEEEECCCCC---EEEEecCCCcccCeEECCCCCEEEEEECcCCceEEEEEECCCCCEEEe
Confidence 676654 222 112221111222234456776444332100025789999999887654
No 83
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=27.02 E-value=2.7e+02 Score=23.12 Aligned_cols=56 Identities=7% Similarity=-0.019 Sum_probs=30.0
Q ss_pred CCEEEEEEECCCcceEEEEEec--CCCcceeeEEEEeCCeEEEEeCccccCCEEEEEECCCCcEE
Q 039648 171 EQCFEIWVMNDNKCWAKHLTLG--PFFNFRINFGFWKNDAFFIESNSRIYGGCLFLHEHRTKEIK 233 (254)
Q Consensus 171 ~~~~~IW~l~~~~~W~~~~~i~--~~~~~~~~~~~~~~g~i~l~~~~~~~~~~~~~yd~~t~~~~ 233 (254)
...+.||-.+. +. .+..+. ....+.....+..+|.++.... ++.+.++|+++++.+
T Consensus 377 ~~~i~iwd~~~-g~--~~~~l~~~~~~~v~s~~~fspdg~~lasg~----d~~i~iW~~~~gk~r 434 (435)
T 4e54_B 377 LRTIDVFDGNS-GK--MMCQLYDPESSGISSLNEFNPMGDTLASAM----GYHILIWSQQEARTR 434 (435)
T ss_dssp CCCEEEECSSS-CC--EEEEECCSSCCCCCCEEEECTTSSCEEEEC----SSEEEECCCC-----
T ss_pred CCEEEEEECCC-Cc--EEEEEeCCCCCcEEEEEEECCCCCEEEEEc----CCcEEEEECCcCeee
Confidence 45789997765 22 122221 2222323334556788776655 678999999988765
No 84
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=26.20 E-value=2.9e+02 Score=23.16 Aligned_cols=115 Identities=8% Similarity=0.015 Sum_probs=60.3
Q ss_pred ceEEEE---EEEEEEEecCCCceEEEEEECCCcceeEecCCCCCCceeEEEEeCCeEEEEecCCCCEEEEEEECCCcceE
Q 039648 110 LDRYFK---VCYWLVIADTRDLKVILSFHMDNEVFEEIKIPPHVNYYSSISLYEDSLSIVIPDAEQCFEIWVMNDNKCWA 186 (254)
Q Consensus 110 ~~v~~~---~lyWl~~~~~~~~~~IvsfD~~~e~~~~i~~P~~~~~~~~l~~~~g~L~~~~~~~~~~~~IW~l~~~~~W~ 186 (254)
.++.++ .|||.... ...|..+|+++.+...+...... ....+...++.|......... .||+++....|.
T Consensus 134 ~~la~d~~g~lyv~d~~----~~~I~~id~~~g~~~~~~~~~~~-~~ia~~~~g~~l~~~d~~~~~--~I~~~d~~~~~~ 206 (409)
T 3hrp_A 134 WGIAAVGNNTVLAYQRD----DPRVRLISVDDNKVTTVHPGFKG-GKPAVTKDKQRVYSIGWEGTH--TVYVYMKASGWA 206 (409)
T ss_dssp EEEEECSTTEEEEEETT----TTEEEEEETTTTEEEEEEETCCB-CBCEECTTSSEEEEEBSSTTC--EEEEEEGGGTTC
T ss_pred eEEEEeCCCCEEEEecC----CCcEEEEECCCCEEEEeeccCCC-CceeEecCCCcEEEEecCCCc--eEEEEEcCCCce
Confidence 455554 78876532 24799999998877665332211 122222223345544432122 677777533443
Q ss_pred --EEEEecC-CCcceeeEEEEe-CCeEEEEeCccccCCEEEEEECCCCcEEEE
Q 039648 187 --KHLTLGP-FFNFRINFGFWK-NDAFFIESNSRIYGGCLFLHEHRTKEIKNL 235 (254)
Q Consensus 187 --~~~~i~~-~~~~~~~~~~~~-~g~i~l~~~~~~~~~~~~~yd~~t~~~~~~ 235 (254)
..-.+.. ......-+.+.. +|.|++... ...+..||++++....+
T Consensus 207 ~~~~g~~~~~~~~~p~~iav~p~~g~lyv~d~----~~~I~~~d~~~~~~~~~ 255 (409)
T 3hrp_A 207 PTRIGQLGSTFSGKIGAVALDETEEWLYFVDS----NKNFGRFNVKTQEVTLI 255 (409)
T ss_dssp EEEEEECCTTSCSCCCBCEECTTSSEEEEECT----TCEEEEEETTTCCEEEE
T ss_pred eEEeeeccchhcCCcEEEEEeCCCCeEEEEEC----CCcEEEEECCCCCEEEE
Confidence 2211111 111122344555 677777443 56799999988876554
No 85
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=24.86 E-value=2.5e+02 Score=22.67 Aligned_cols=60 Identities=5% Similarity=0.112 Sum_probs=28.5
Q ss_pred CCEEEEEEECC-CcceEEEEEecCCCcceeeEEEEeCCeEEEEeCccccCCEEEEEECCCCcEE
Q 039648 171 EQCFEIWVMND-NKCWAKHLTLGPFFNFRINFGFWKNDAFFIESNSRIYGGCLFLHEHRTKEIK 233 (254)
Q Consensus 171 ~~~~~IW~l~~-~~~W~~~~~i~~~~~~~~~~~~~~~g~i~l~~~~~~~~~~~~~yd~~t~~~~ 233 (254)
...+.||-+.. +..-........-.....-+.+..+|..++.... ++.+.+||+++++..
T Consensus 114 dg~v~lWd~~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~sgs~---dg~v~iwd~~~~~~~ 174 (357)
T 4g56_B 114 SGAVELWEILEKESLLVNKFAKYEHDDIVKTLSVFSDGTQAVSGGK---DFSVKVWDLSQKAVL 174 (357)
T ss_dssp TSCEEEC--------CCCCEEECCCSSCEEEEEECSSSSEEEEEET---TSCEEEEETTTTEEE
T ss_pred CCEEEEeeccccceeEEEeeccCCCCCCEEEEEECCCCCEEEEEeC---CCeEEEEECCCCcEE
Confidence 56789998875 1111111111100111233445567776665442 677889999887644
No 86
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=24.84 E-value=2.4e+02 Score=21.73 Aligned_cols=67 Identities=13% Similarity=0.143 Sum_probs=41.6
Q ss_pred CeEEEEecCCCCEEEEEEECC------CcceEEEEEecCCCcceeeEEEEeC--CeEEEEeCccccCCEEEEEECCCCc
Q 039648 161 DSLSIVIPDAEQCFEIWVMND------NKCWAKHLTLGPFFNFRINFGFWKN--DAFFIESNSRIYGGCLFLHEHRTKE 231 (254)
Q Consensus 161 g~L~~~~~~~~~~~~IW~l~~------~~~W~~~~~i~~~~~~~~~~~~~~~--g~i~l~~~~~~~~~~~~~yd~~t~~ 231 (254)
|.+.+... ....+.||-++. ...|.....+........-+.+..+ +..++.... ++.+.+||+++++
T Consensus 71 ~~~l~s~~-~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~---dg~v~iwd~~~~~ 145 (351)
T 3f3f_A 71 GRIIASAS-YDKTVKLWEEDPDQEECSGRRWNKLCTLNDSKGSLYSVKFAPAHLGLKLACLGN---DGILRLYDALEPS 145 (351)
T ss_dssp CSEEEEEE-TTSCEEEEEECTTSCTTSSCSEEEEEEECCCSSCEEEEEECCGGGCSEEEEEET---TCEEEEEECSSTT
T ss_pred CCEEEEEc-CCCeEEEEecCCCcccccccCcceeeeecccCCceeEEEEcCCCCCcEEEEecC---CCcEEEecCCChH
Confidence 55544442 367899999986 2456777666532222333445555 665555442 7889999988764
No 87
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=24.60 E-value=4e+02 Score=24.18 Aligned_cols=116 Identities=8% Similarity=0.041 Sum_probs=58.7
Q ss_pred ceEEEE-EEEEEEEecCCCceEEEEEECCCc--ceeEecCCCCCC---------ceeEEEEeCCeEEEEecCCCCEEEEE
Q 039648 110 LDRYFK-VCYWLVIADTRDLKVILSFHMDNE--VFEEIKIPPHVN---------YYSSISLYEDSLSIVIPDAEQCFEIW 177 (254)
Q Consensus 110 ~~v~~~-~lyWl~~~~~~~~~~IvsfD~~~e--~~~~i~~P~~~~---------~~~~l~~~~g~L~~~~~~~~~~~~IW 177 (254)
.++..+ .+|-.+.. ..|.|+|.++. .|+. ..+.... ....+...+|++.+... ...+..+
T Consensus 61 ~P~v~~g~vyv~~~~-----~~v~AlD~~tG~~~W~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~--dg~l~al 132 (668)
T 1kv9_A 61 TPLFHDGVIYTSMSW-----SRVIAVDAASGKELWRY-DPEVAKVKARTSCCDAVNRGVALWGDKVYVGTL--DGRLIAL 132 (668)
T ss_dssp CCEEETTEEEEEEGG-----GEEEEEETTTCCEEEEE-CCCCCGGGGGGCTTCSCCCCCEEEBTEEEEECT--TSEEEEE
T ss_pred CCEEECCEEEEECCC-----CeEEEEECCCChhceEE-CCCCCccccccccccCCccceEEECCEEEEEcC--CCEEEEE
Confidence 467777 88865432 36999998755 4543 2221110 11234455677655442 2333332
Q ss_pred EECC-CcceEEEEEecCC-Ccc-eeeEEEEeCCeEEEEeCcc--ccCCEEEEEECCCCcEEEE
Q 039648 178 VMND-NKCWAKHLTLGPF-FNF-RINFGFWKNDAFFIESNSR--IYGGCLFLHEHRTKEIKNL 235 (254)
Q Consensus 178 ~l~~-~~~W~~~~~i~~~-~~~-~~~~~~~~~g~i~l~~~~~--~~~~~~~~yd~~t~~~~~~ 235 (254)
-.+. +..|+....-+.. ..+ ..|+- .++.+++..... ..++.+..+|.+|++..+-
T Consensus 133 D~~tG~~~W~~~~~~~~~~~~~~~~P~v--~~~~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~ 193 (668)
T 1kv9_A 133 DAKTGKAIWSQQTTDPAKPYSITGAPRV--VKGKVIIGNGGAEYGVRGFVSAYDADTGKLAWR 193 (668)
T ss_dssp ETTTCCEEEEEECSCTTSSCBCCSCCEE--ETTEEEECCBCTTTCCBCEEEEEETTTCCEEEE
T ss_pred ECCCCCEeeeeccCCCCCcceecCCCEE--ECCEEEEeCCCCCcCCCCEEEEEECCCCcEEEE
Confidence 2233 5567764311111 111 23332 356666654310 0136899999999987654
No 88
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=23.85 E-value=2.5e+02 Score=21.69 Aligned_cols=99 Identities=9% Similarity=0.035 Sum_probs=51.6
Q ss_pred EEEEEECCCcceeEecCCCCCCceeEEEEe-CCeEEEEecCCCCEEEEEEECCCcceEEEEEecCCCcceeeEEEEeCCe
Q 039648 130 VILSFHMDNEVFEEIKIPPHVNYYSSISLY-EDSLSIVIPDAEQCFEIWVMNDNKCWAKHLTLGPFFNFRINFGFWKNDA 208 (254)
Q Consensus 130 ~IvsfD~~~e~~~~i~~P~~~~~~~~l~~~-~g~L~~~~~~~~~~~~IW~l~~~~~W~~~~~i~~~~~~~~~~~~~~~g~ 208 (254)
.|..+|+++.+...+.++........+... +|+..++. ...+.+|-++. . ..+..++... ...-+.+..+|.
T Consensus 220 ~v~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~---~~~v~~~d~~~-~--~~~~~~~~~~-~~~~~~~s~dg~ 292 (337)
T 1pby_B 220 GLLTMDLETGEMAMREVRIMDVFYFSTAVNPAKTRAFGA---YNVLESFDLEK-N--ASIKRVPLPH-SYYSVNVSTDGS 292 (337)
T ss_dssp EEEEEETTTCCEEEEEEEECSSCEEEEEECTTSSEEEEE---ESEEEEEETTT-T--EEEEEEECSS-CCCEEEECTTSC
T ss_pred ceEEEeCCCCCceEeecCCCCCceeeEEECCCCCEEEEe---CCeEEEEECCC-C--cCcceecCCC-ceeeEEECCCCC
Confidence 578899998876544443222111122222 34333333 35677777664 2 2223333211 112345566776
Q ss_pred EEEEeCccccCCEEEEEECCCCcE-EEEEEc
Q 039648 209 FFIESNSRIYGGCLFLHEHRTKEI-KNLQVT 238 (254)
Q Consensus 209 i~l~~~~~~~~~~~~~yd~~t~~~-~~~~~~ 238 (254)
.++.... +..+.+||+++++. +.+...
T Consensus 293 ~l~~~~~---~~~i~v~d~~~~~~~~~~~~~ 320 (337)
T 1pby_B 293 TVWLGGA---LGDLAAYDAETLEKKGQVDLP 320 (337)
T ss_dssp EEEEESB---SSEEEEEETTTCCEEEEEECG
T ss_pred EEEEEcC---CCcEEEEECcCCcEEEEEEcC
Confidence 4444442 78899999998764 444443
No 89
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=23.58 E-value=2.6e+02 Score=21.71 Aligned_cols=57 Identities=5% Similarity=0.060 Sum_probs=31.0
Q ss_pred CCCEEEEEEECCCcceEEEEEecCCCcceeeEEEEeCCeEEEEeCccccCCEEEEEECCCCcE
Q 039648 170 AEQCFEIWVMNDNKCWAKHLTLGPFFNFRINFGFWKNDAFFIESNSRIYGGCLFLHEHRTKEI 232 (254)
Q Consensus 170 ~~~~~~IW~l~~~~~W~~~~~i~~~~~~~~~~~~~~~g~i~l~~~~~~~~~~~~~yd~~t~~~ 232 (254)
....+.+|-++. .. ....+..-.....-+.+..++.+++.... ++.+.+||+++.+.
T Consensus 193 ~d~~i~i~d~~~-~~--~~~~~~~h~~~v~~~~~s~~~~~l~s~s~---Dg~i~iwd~~~~~~ 249 (340)
T 4aow_A 193 WDKLVKVWNLAN-CK--LKTNHIGHTGYLNTVTVSPDGSLCASGGK---DGQAMLWDLNEGKH 249 (340)
T ss_dssp TTSCEEEEETTT-TE--EEEEECCCSSCEEEEEECTTSSEEEEEET---TCEEEEEETTTTEE
T ss_pred CCCEEEEEECCC-Cc--eeeEecCCCCcEEEEEECCCCCEEEEEeC---CCeEEEEEeccCce
Confidence 467789998876 22 22222211111223444556666555442 67788888877643
No 90
>2dk7_A Transcription elongation regulator 1; structural genomics, WW domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=23.41 E-value=75 Score=20.20 Aligned_cols=14 Identities=14% Similarity=0.142 Sum_probs=12.1
Q ss_pred CCEEEEEECCCCcE
Q 039648 219 GGCLFLHEHRTKEI 232 (254)
Q Consensus 219 ~~~~~~yd~~t~~~ 232 (254)
++++++||..|++-
T Consensus 29 dGR~fyyN~~Tk~S 42 (73)
T 2dk7_A 29 DERVFFYNPTTRLS 42 (73)
T ss_dssp SSCEEEEETTTTEE
T ss_pred CCCEEEecCcccce
Confidence 78999999999854
No 91
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=23.23 E-value=2.2e+02 Score=23.29 Aligned_cols=57 Identities=19% Similarity=0.254 Sum_probs=36.0
Q ss_pred EEEEEECCCcceEEEEEecCCCcceeeEEEEeCCeEEEEeCccccCCEEEEEECCCCcEEEEEE
Q 039648 174 FEIWVMNDNKCWAKHLTLGPFFNFRINFGFWKNDAFFIESNSRIYGGCLFLHEHRTKEIKNLQV 237 (254)
Q Consensus 174 ~~IW~l~~~~~W~~~~~i~~~~~~~~~~~~~~~g~i~l~~~~~~~~~~~~~yd~~t~~~~~~~~ 237 (254)
-.||+.+- .....+.+++... ..-+.+..+|..++..+ ...+.+||.++++++.+..
T Consensus 286 ~~v~viD~-~t~~~v~~i~~~~--p~~ia~spdg~~l~v~n----~~~v~v~D~~t~~l~~~~~ 342 (361)
T 2oiz_A 286 AEIWVMDT-KTKQRVARIPGRD--ALSMTIDQQRNLMLTLD----GGNVNVYDISQPEPKLLRT 342 (361)
T ss_dssp SEEEEEET-TTTEEEEEEECTT--CCEEEEETTTTEEEEEC----SSCEEEEECSSSSCEEEEE
T ss_pred ceEEEEEC-CCCcEEEEEecCC--eeEEEECCCCCEEEEeC----CCeEEEEECCCCcceeeEE
Confidence 35555553 3345666665432 33455677888777766 3789999999986565543
No 92
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=23.04 E-value=2.7e+02 Score=21.75 Aligned_cols=98 Identities=14% Similarity=0.172 Sum_probs=0.0
Q ss_pred ceEEEEEECCCcceeEecCCCCCC-----ceeEEEEeCCeEEEEecCCCCEEEEEEECCCcceEEEEEecCCCcceeeEE
Q 039648 128 LKVILSFHMDNEVFEEIKIPPHVN-----YYSSISLYEDSLSIVIPDAEQCFEIWVMNDNKCWAKHLTLGPFFNFRINFG 202 (254)
Q Consensus 128 ~~~IvsfD~~~e~~~~i~~P~~~~-----~~~~l~~~~g~L~~~~~~~~~~~~IW~l~~~~~W~~~~~i~~~~~~~~~~~ 202 (254)
...|++||.+.+.-..+.+..... ....-...+|.+.++. .....+..|-.+.+..|+....-.+.. ..
T Consensus 98 ~~~v~~vd~~Gk~l~~~~~~~~~~~~~~~~~~v~~~~~G~~lv~~-~~~~~v~~~d~~G~~~w~~~~~~~~~~-----~~ 171 (276)
T 3no2_A 98 PSTILEVNMKGEVLSKTEFETGIERPHAQFRQINKNKKGNYLVPL-FATSEVREIAPNGQLLNSVKLSGTPFS-----SA 171 (276)
T ss_dssp TEEEEEECTTSCEEEEEEECCSCSSGGGSCSCCEECTTSCEEEEE-TTTTEEEEECTTSCEEEEEECSSCCCE-----EE
T ss_pred CCEEEEEeCCCCEEEEEeccCCCCcccccccCceECCCCCEEEEe-cCCCEEEEECCCCCEEEEEECCCCccc-----ee
Q ss_pred EEeCCeEEEEeCccccCCEEEEEECCCCcEEE
Q 039648 203 FWKNDAFFIESNSRIYGGCLFLHEHRTKEIKN 234 (254)
Q Consensus 203 ~~~~g~i~l~~~~~~~~~~~~~yd~~t~~~~~ 234 (254)
...+|.+++.... +..+..+|++|+++.+
T Consensus 172 ~~~~g~~~v~~~~---~~~v~~~d~~tG~~~w 200 (276)
T 3no2_A 172 FLDNGDCLVACGD---AHCFVQLNLESNRIVR 200 (276)
T ss_dssp ECTTSCEEEECBT---TSEEEEECTTTCCEEE
T ss_pred EcCCCCEEEEeCC---CCeEEEEeCcCCcEEE
No 93
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=22.90 E-value=4.2e+02 Score=23.84 Aligned_cols=190 Identities=11% Similarity=0.010 Sum_probs=93.8
Q ss_pred cEEEEcCcccccc--cCCCCCCCCCCCCCCCCcceEEEEeeCCCCCeEEEEEeeeeccccccCCCcCeEEEEEccCCcee
Q 039648 26 RLTIWNPATREFR--NLPNYKYCNSSNRLIPPSTFICLESDPINNDFKLLFVHNLWNEKRKRYGKVPNVQVYGFRTNSWR 103 (254)
Q Consensus 26 ~~~V~NP~T~~~~--~LP~~~~~~~~~~~~~~~~~~g~g~d~~~~~yKVv~~~~~~~~~~~~~~~~~~~~Vys~~~~~Wr 103 (254)
++++|+..|++.. .+-..+.. .....+..+.+.. +|-++.... . .....+.+.+..++.|+
T Consensus 203 ~v~~~~l~t~~~~~~lv~~~~~~--------~~~~~~~~~SpDG-~~l~~~~~~--~------~~~~~l~~~~~~~~~~~ 265 (695)
T 2bkl_A 203 TIRYHTLGTEPSKDTVVHERTGD--------PTTFLQSDLSRDG-KYLFVYILR--G------WSENDVYWKRPGEKDFR 265 (695)
T ss_dssp EEEEEETTSCGGGCEEEECCCCC--------TTCEEEEEECTTS-CCEEEEEEE--T------TTEEEEEEECTTCSSCE
T ss_pred EEEEEECCCCchhceEEEecCCC--------CEEEEEEEECCCC-CEEEEEEeC--C------CCceEEEEEcCCCCceE
Confidence 3799998887642 22111110 1223455565543 444443321 0 01223334444456787
Q ss_pred eccccC----ceEEEE-EEEEEEEecCCCceEEEEEECCCcc---eeEecCCCCCCceeEEEEeCCeEEEEecCCCCEEE
Q 039648 104 EVHGHQ----LDRYFK-VCYWLVIADTRDLKVILSFHMDNEV---FEEIKIPPHVNYYSSISLYEDSLSIVIPDAEQCFE 175 (254)
Q Consensus 104 ~~~~~p----~~v~~~-~lyWl~~~~~~~~~~IvsfD~~~e~---~~~i~~P~~~~~~~~l~~~~g~L~~~~~~~~~~~~ 175 (254)
.+.... .+++-+ .+|.. .+.......|+..|+++.. |+.+-.+........+...++.|.+... ......
T Consensus 266 ~l~~~~~~~~~~~~~~g~l~~~-s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~l~~~~~~~~~lv~~~~-~dg~~~ 343 (695)
T 2bkl_A 266 LLVKGVGAKYEVHAWKDRFYVL-TDEGAPRQRVFEVDPAKPARASWKEIVPEDSSASLLSVSIVGGHLSLEYL-KDATSE 343 (695)
T ss_dssp EEEECSSCCEEEEEETTEEEEE-ECTTCTTCEEEEEBTTBCSGGGCEEEECCCSSCEEEEEEEETTEEEEEEE-ETTEEE
T ss_pred EeecCCCceEEEEecCCcEEEE-ECCCCCCCEEEEEeCCCCCccCCeEEecCCCCCeEEEEEEECCEEEEEEE-ECCEEE
Confidence 765441 344444 74433 3322234689999997654 5555322211112233444888876663 356778
Q ss_pred EEEECCCcceEEEEEecCC-CcceeeEEEEeCC-eEEEEeCccccCCEEEEEECCCCcEEEEE
Q 039648 176 IWVMNDNKCWAKHLTLGPF-FNFRINFGFWKND-AFFIESNSRIYGGCLFLHEHRTKEIKNLQ 236 (254)
Q Consensus 176 IW~l~~~~~W~~~~~i~~~-~~~~~~~~~~~~g-~i~l~~~~~~~~~~~~~yd~~t~~~~~~~ 236 (254)
||+++-.+. ....+... .....-+....++ .+++..........++.||+++++.+.+.
T Consensus 344 l~~~~~~g~--~~~~l~~~~~~~v~~~~~s~d~~~l~~~~ss~~~P~~v~~~d~~~g~~~~l~ 404 (695)
T 2bkl_A 344 VRVATLKGK--PVRTVQLPGVGAASNLMGLEDLDDAYYVFTSFTTPRQIYKTSVSTGKSELWA 404 (695)
T ss_dssp EEEEETTCC--EEEECCCSSSSEECCCBSCTTCSEEEEEEEETTEEEEEEEEETTTCCEEEEE
T ss_pred EEEEeCCCC--eeEEecCCCCeEEEEeecCCCCCEEEEEEcCCCCCCEEEEEECCCCcEEEEe
Confidence 888873121 22333311 1111112222344 45555432223467899999998877663
No 94
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=22.88 E-value=3.5e+02 Score=22.92 Aligned_cols=103 Identities=12% Similarity=0.057 Sum_probs=56.7
Q ss_pred EEEEEEEecCCCceEEEEEECCCcceeEecCCCCCCceeEEEEe-CCe-EEEEecC--CCCEEEEEEECCCcceEEEEEe
Q 039648 116 VCYWLVIADTRDLKVILSFHMDNEVFEEIKIPPHVNYYSSISLY-EDS-LSIVIPD--AEQCFEIWVMNDNKCWAKHLTL 191 (254)
Q Consensus 116 ~lyWl~~~~~~~~~~IvsfD~~~e~~~~i~~P~~~~~~~~l~~~-~g~-L~~~~~~--~~~~~~IW~l~~~~~W~~~~~i 191 (254)
.||+.... ..|..||+++++...+.-+. . ....+... +|. |.+.... ......+|...+ ..|.....+
T Consensus 151 ~Lyv~d~~-----~~I~~id~~~~~v~~~~~~~-~-~P~~ia~d~~G~~lyvad~~~~~~~~~v~~~~~~-g~~~~~~~l 222 (430)
T 3tc9_A 151 HLYLVGEQ-----HPTRLIDFEKEYVSTVYSGL-S-KVRTICWTHEADSMIITNDQNNNDRPNNYILTRE-SGFKVITEL 222 (430)
T ss_dssp EEEEEEBT-----EEEEEEETTTTEEEEEECCC-S-CEEEEEECTTSSEEEEEECCSCTTSEEEEEEEGG-GTSCSEEEE
T ss_pred eEEEEeCC-----CcEEEEECCCCEEEEEecCC-C-CcceEEEeCCCCEEEEEeCCCCcccceEEEEeCC-Cceeeeeee
Confidence 77776432 47999999988776653221 1 22334433 444 6666631 223345555554 444422222
Q ss_pred cCCCcceee--EEEEe-CCeEEEEeCccccCCEEEEEECCCCcE
Q 039648 192 GPFFNFRIN--FGFWK-NDAFFIESNSRIYGGCLFLHEHRTKEI 232 (254)
Q Consensus 192 ~~~~~~~~~--~~~~~-~g~i~l~~~~~~~~~~~~~yd~~t~~~ 232 (254)
.. ...| +.+.. +|.|++.... ..++..||+.+++.
T Consensus 223 ~~---~~~p~giavdp~~g~lyv~d~~---~~~V~~~~~~~~~~ 260 (430)
T 3tc9_A 223 TK---GQNCNGAETHPINGELYFNSWN---AGQVFRYDFTTQET 260 (430)
T ss_dssp EE---CSSCCCEEECTTTCCEEEEETT---TTEEEEEETTTTEE
T ss_pred cc---CCCceEEEEeCCCCEEEEEECC---CCEEEEEECCCCcE
Confidence 21 1223 33444 6677777652 56788888887766
No 95
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=22.85 E-value=2.7e+02 Score=21.65 Aligned_cols=19 Identities=11% Similarity=0.038 Sum_probs=11.8
Q ss_pred eEEEEEECCCcceeEecCC
Q 039648 129 KVILSFHMDNEVFEEIKIP 147 (254)
Q Consensus 129 ~~IvsfD~~~e~~~~i~~P 147 (254)
..|.++|.+.+.....+++
T Consensus 157 ~~l~~~d~~g~~~~~~~~~ 175 (330)
T 3hxj_A 157 NYLYAINPDGTEKWRFKTN 175 (330)
T ss_dssp SEEEEECTTSCEEEEEECS
T ss_pred CEEEEECCCCCEeEEEecC
Confidence 3799999884443444443
No 96
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=21.06 E-value=3e+02 Score=21.46 Aligned_cols=103 Identities=12% Similarity=0.025 Sum_probs=54.8
Q ss_pred EEEEEEEecCCCceEEEEEECCCcceeEecCCCCCCceeEEEEe-CCeEEEEecCCCCEEEEEEECCCcceEEEEEecCC
Q 039648 116 VCYWLVIADTRDLKVILSFHMDNEVFEEIKIPPHVNYYSSISLY-EDSLSIVIPDAEQCFEIWVMNDNKCWAKHLTLGPF 194 (254)
Q Consensus 116 ~lyWl~~~~~~~~~~IvsfD~~~e~~~~i~~P~~~~~~~~l~~~-~g~L~~~~~~~~~~~~IW~l~~~~~W~~~~~i~~~ 194 (254)
.+||..... ..|..+|.++++...+..|... ..+... +|.|.+.. ...+.+|-.+ ...++.+......
T Consensus 26 ~l~~~d~~~----~~i~~~d~~~~~~~~~~~~~~~---~~i~~~~dG~l~v~~---~~~l~~~d~~-~g~~~~~~~~~~~ 94 (297)
T 3g4e_A 26 SLLFVDIPA----KKVCRWDSFTKQVQRVTMDAPV---SSVALRQSGGYVATI---GTKFCALNWK-EQSAVVLATVDND 94 (297)
T ss_dssp EEEEEETTT----TEEEEEETTTCCEEEEECSSCE---EEEEEBTTSSEEEEE---TTEEEEEETT-TTEEEEEEECCTT
T ss_pred EEEEEECCC----CEEEEEECCCCcEEEEeCCCce---EEEEECCCCCEEEEE---CCeEEEEECC-CCcEEEEEecCCC
Confidence 788875332 3799999998887777666432 223333 56655444 2344444443 3555554443321
Q ss_pred Ccceee--EEEEeCCeEEEEeCcc--------ccCCEEEEEECCC
Q 039648 195 FNFRIN--FGFWKNDAFFIESNSR--------IYGGCLFLHEHRT 229 (254)
Q Consensus 195 ~~~~~~--~~~~~~g~i~l~~~~~--------~~~~~~~~yd~~t 229 (254)
....+| +.+..+|.+++..... .....++.+|...
T Consensus 95 ~~~~~~~di~~d~dG~l~~~~~~~~~~~~~~~~~~~~l~~~d~~g 139 (297)
T 3g4e_A 95 KKNNRFNDGKVDPAGRYFAGTMAEETAPAVLERHQGALYSLFPDH 139 (297)
T ss_dssp CSSEEEEEEEECTTSCEEEEEEECCSBTTBCCTTCEEEEEECTTS
T ss_pred CCCCCCCCEEECCCCCEEEecCCcccccccccCCCcEEEEEECCC
Confidence 112223 4445677777654210 0124677777754
No 97
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=20.82 E-value=4.5e+02 Score=23.46 Aligned_cols=60 Identities=13% Similarity=0.220 Sum_probs=35.6
Q ss_pred CCCEEEEEEECC-CcceEE-EEEec-CCCcceeeEEEEeCCeEEEEeCccccCCEEEEEECCCCcEE
Q 039648 170 AEQCFEIWVMND-NKCWAK-HLTLG-PFFNFRINFGFWKNDAFFIESNSRIYGGCLFLHEHRTKEIK 233 (254)
Q Consensus 170 ~~~~~~IW~l~~-~~~W~~-~~~i~-~~~~~~~~~~~~~~g~i~l~~~~~~~~~~~~~yd~~t~~~~ 233 (254)
.+..+.||.+.. ...+.. ..++. ... ...-+.+..+|..++.... ++.+.+||+++++..
T Consensus 403 ~D~~i~~W~~~~~~~~~~~~~~~~~~h~~-~v~~v~~s~~g~~l~sgs~---Dg~v~vwd~~~~~~~ 465 (694)
T 3dm0_A 403 RDKSIILWKLTKDDKAYGVAQRRLTGHSH-FVEDVVLSSDGQFALSGSW---DGELRLWDLAAGVST 465 (694)
T ss_dssp TTSEEEEEECCCSTTCSCEEEEEEECCSS-CEEEEEECTTSSEEEEEET---TSEEEEEETTTTEEE
T ss_pred CCCcEEEEEccCCCcccccccceecCCCC-cEEEEEECCCCCEEEEEeC---CCcEEEEECCCCcce
Confidence 467899999986 222222 22222 111 2234555667776666542 788999999887543
No 98
>2jp2_A Spred-2, sprouty-related, EVH1 domain-containing protein 2; solution structure, structural genomics, structural genomics consortium, SGC; NMR {Homo sapiens}
Probab=20.59 E-value=1.2e+02 Score=21.44 Aligned_cols=40 Identities=5% Similarity=-0.093 Sum_probs=25.1
Q ss_pred cEEEEcCcccccccCCCCCCCCCCCCCCCCcceEEEE--e---eCCCCCeEEEEEe
Q 039648 26 RLTIWNPATREFRNLPNYKYCNSSNRLIPPSTFICLE--S---DPINNDFKLLFVH 76 (254)
Q Consensus 26 ~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~g~g--~---d~~~~~yKVv~~~ 76 (254)
.+++.+|.|+.|. |..... ...+.+. + |...+.|+|+...
T Consensus 21 ~Vm~~D~~~~~W~--p~~~g~---------ls~v~v~~~~~~~d~~~~~yrI~~~~ 65 (126)
T 2jp2_A 21 VVMTRDDSSGGWF--PQEGGG---------ISRVGVCKVMHPEGNGRSGFLIHGER 65 (126)
T ss_dssp EEEEECTTSSSSE--ECSCCS---------CEEEEEECCBCTTCSSCBCEEEEEEE
T ss_pred EEeeEcCCCCCEe--eCCCCC---------cccEEEEEecCCCCCCCCEEEEEEEE
Confidence 4689999999875 443211 1223333 3 5677899999875
Done!