BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 039649
(434 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|4I8V|A Chain A, Human Cytochrome P450 1a1 In Complex With
Alpha-naphthoflavone
pdb|4I8V|B Chain B, Human Cytochrome P450 1a1 In Complex With
Alpha-naphthoflavone
pdb|4I8V|C Chain C, Human Cytochrome P450 1a1 In Complex With
Alpha-naphthoflavone
pdb|4I8V|D Chain D, Human Cytochrome P450 1a1 In Complex With
Alpha-naphthoflavone
Length = 491
Score = 85.5 bits (210), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 107/471 (22%), Positives = 196/471 (41%), Gaps = 100/471 (21%)
Query: 38 KANIERSLSLPPGPWKLPIIGNLHHLVGSLPHHRLRNLANNYGPIMYLQIGEHPTILVSS 97
K + L PPGPW P+IG++ L G PH L ++ YG ++ ++IG P +++S
Sbjct: 3 KKTSSKGLKNPPGPWGWPLIGHMLTL-GKNPHLALSRMSQQYGDVLQIRIGSTPVVVLSG 61
Query: 98 PQSAKGVMQTHDEFFATRVETVATKIMTYDFSAVSFAP-YGEQWIELRKLC-----TMEL 151
+ + + + F R + + T + + ++SF+P G W R+L + +
Sbjct: 62 LDTIRQALVRQGDDFKGRPD-LYTFTLISNGQSMSFSPDSGPVWAARRRLAQNGLKSFSI 120
Query: 152 SSKKRDQSFRYDREEEVSE-------VIRSIASKAGS-------VTNLSDIVSSLAYN-- 195
+S + Y EE VS+ ++ + + G V ++++++ ++ +
Sbjct: 121 ASDPASSTSCY-LEEHVSKEAEVLISTLQELMAGPGHFNPYRYVVVSVTNVICAICFGRR 179
Query: 196 -----------LFLKIAFLAAAGS-NTADLFPSIKFL--QLIAGVKSQVEKIHQQADKII 241
+ L F GS N AD P +++L + K EK + K++
Sbjct: 180 YDHNHQELLSLVNLNNNFGEVVGSGNPADFIPILRYLPNPSLNAFKDLNEKFYSFMQKMV 239
Query: 242 SNIIEERETRLKTGKSEEDGDLVDVLLRD------QENGNLQFPMTIKTIKAVIFEIFAA 295
+ KT + D+ D L+ EN N+Q ++ + I ++ ++F A
Sbjct: 240 -------KEHYKTFEKGHIRDITDSLIEHCQEKQLDENANVQ--LSDEKIINIVLDLFGA 290
Query: 296 GTDSSAIAIDRALSEIIKNPRVPKRVQGEVREVFNRKGKVDETGIEELQFLKLVIKETLK 355
G D+ AI +L ++ NPRV +++Q E+ V R + + L +++ I ET +
Sbjct: 291 GFDTVTTAISWSLMYLVMNPRVQRKIQEELDTVIGRSRRPRLSDRSHLPYMEAFILETFR 350
Query: 356 LH----------------------PPGSL----------DPKYWTEPESFILERF--PDS 381
P G D K W P F+ ERF PD
Sbjct: 351 HSSFVPFTIPHSTTRDTSLKGFYIPKGRCVFVNQWQINHDQKLWVNPSEFLPERFLTPDG 410
Query: 382 SINFQVNNFEYIAFG-------SVPILRFP----LAMLLYHFDWKLPNGMK 421
+I+ +V + + I FG I R+ LA+LL ++ +P G+K
Sbjct: 411 AID-KVLSEKVIIFGMGKRKCIGETIARWEVFLFLAILLQRVEFSVPLGVK 460
>pdb|1DT6|A Chain A, Structure Of Mammalian Cytochrome P450 2c5
pdb|1N6B|A Chain A, Microsomal Cytochrome P450 2c5/3lvdh Complex With A
Dimethyl Derivative Of Sulfaphenazole
pdb|1NR6|A Chain A, Microsomal Cytochrome P450 2c53LVDH COMPLEX WITH
DICLOFENAC
Length = 473
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 77/318 (24%), Positives = 139/318 (43%), Gaps = 49/318 (15%)
Query: 47 LPPGPWKLPIIGNLHHLVGSLPHHRLRNLANNYGPIMYLQIGEHPTILVSSPQSAKGVMQ 106
LPPGP PIIGN+ + L + YGP+ + +G PT+++ ++ K +
Sbjct: 11 LPPGPTPFPIIGNILQIDAKDISKSLTKFSECYGPVFTVYLGMKPTVVLHGYEAVKEALV 70
Query: 107 THDEFFATR-----VETVATKIMTYDFSAVSFAPYGEQWIELRKLCTMELSSKKRDQSFR 161
E FA R +E V+ + ++F+ + W E+R+ M L + +
Sbjct: 71 DLGEEFAGRGSVPILEKVSKGL------GIAFS-NAKTWKEMRRFSLMTLRNFGMGKRSI 123
Query: 162 YDR-EEEVSEVIRSIASKAGSVTNLSDIVSSLAYNLFLKIAFLAAAGSNTADLFPSIKFL 220
DR +EE ++ + S + + I+ N+ + F N D + +FL
Sbjct: 124 EDRIQEEARCLVEELRKTNASPCDPTFILGCAPCNVICSVIF-----HNRFD-YKDEEFL 177
Query: 221 QLIAGVKSQVE---------------------KIH----QQADKIISNIIEERETRLKTG 255
+L+ + VE IH + AD I + I+E+ + K
Sbjct: 178 KLMESLHENVELLGTPWLQVYNNFPALLDYFPGIHKTLLKNADYIKNFIMEKVKEHQKLL 237
Query: 256 KSEEDGDLVDVLL--RDQENGNLQFPMTIKTIKAVIFEIFAAGTDSSAIAIDRALSEIIK 313
D +D L +QEN NL+F T++++ + ++F AGT++++ + +L ++K
Sbjct: 238 DVNNPRDFIDCFLIKMEQEN-NLEF--TLESLVIAVSDLFGAGTETTSTTLRYSLLLLLK 294
Query: 314 NPRVPKRVQGEVREVFNR 331
+P V RVQ E+ V R
Sbjct: 295 HPEVAARVQEEIERVIGR 312
>pdb|3RUK|A Chain A, Human Cytochrome P450 Cyp17a1 In Complex With Abiraterone
pdb|3RUK|B Chain B, Human Cytochrome P450 Cyp17a1 In Complex With Abiraterone
pdb|3RUK|C Chain C, Human Cytochrome P450 Cyp17a1 In Complex With Abiraterone
pdb|3RUK|D Chain D, Human Cytochrome P450 Cyp17a1 In Complex With Abiraterone
pdb|3SWZ|A Chain A, Human Cytochrome P450 17a1 In Complex With Tok-001
pdb|3SWZ|B Chain B, Human Cytochrome P450 17a1 In Complex With Tok-001
pdb|3SWZ|C Chain C, Human Cytochrome P450 17a1 In Complex With Tok-001
pdb|3SWZ|D Chain D, Human Cytochrome P450 17a1 In Complex With Tok-001
Length = 494
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 95/443 (21%), Positives = 180/443 (40%), Gaps = 96/443 (21%)
Query: 63 LVGSLP--------HHRLRNLANNYGPIMYLQIGEHPTILVSSPQSAKGVMQTHDEFFAT 114
LVGSLP H+ L YGPI +++G T++V Q AK V+ + F+
Sbjct: 18 LVGSLPFLPRHGHMHNNFFKLQKKYGPIYSVRMGTKTTVIVGHHQLAKEVLIKKGKDFSG 77
Query: 115 RVETVATKIMTYDFSAVSFAPYGEQWIELRKLCTMELSS-KKRDQSFRYDREEEVSEVIR 173
R + I + + ++FA G W R+L + K DQ +E+S +
Sbjct: 78 RPQMATLDIASNNRKGIAFADSGAHWQLHRRLAMATFALFKDGDQKLEKIICQEISTLCD 137
Query: 174 SIASKAGSVTNLS--------DIVSSLAYNLFLKIA--------------FLAAAGSNTA 211
+A+ G ++S +++S + +N K + +
Sbjct: 138 MLATHNGQSIDISFPVFVAVTNVISLICFNTSYKNGDPELNVIQNYNEGIIDNLSKDSLV 197
Query: 212 DLFPSIKFL--QLIAGVKSQVEKIHQQADKIISNIIEERETRLKTGKSEEDGDLVDVLLR 269
DL P +K + + +KS V+ + +KI+ N E+ +S+ +++D L++
Sbjct: 198 DLVPWLKIFPNKTLEKLKSHVKIRNDLLNKILENYKEKF-------RSDSITNMLDTLMQ 250
Query: 270 ---DQENGNLQFP-----MTIKTIKAVIFEIFAAGTDSSAIAIDRALSEIIKNPRVPKRV 321
+ +NGN ++ I I +IF AG +++ + L+ ++ NP+V K++
Sbjct: 251 AKMNSDNGNAGPDQDSELLSDNHILTTIGDIFGAGVETTTSVVKWTLAFLLHNPQVKKKL 310
Query: 322 QGEVREV--FNRKGKVDETGIEELQFLKLVIKETLKLHPPGSL----------------- 362
E+ + F+R + + L L+ I+E L+L P +
Sbjct: 311 YEEIDQNVGFSRTPTISDR--NRLLLLEATIREVLRLRPVAPMLIPHKANVDSSIGEFAV 368
Query: 363 ---------------DPKYWTEPESFILERFPDSSINFQVN-NFEYIAFGSVPI------ 400
+ K W +P+ F+ ERF + + ++ + Y+ FG+ P
Sbjct: 369 DKGTEVIINLWALHHNEKEWHQPDQFMPERFLNPAGTQLISPSVSYLPFGAGPRSCIGEI 428
Query: 401 -----LRFPLAMLLYHFDWKLPN 418
L +A LL FD ++P+
Sbjct: 429 LARQELFLIMAWLLQRFDLEVPD 451
>pdb|2HI4|A Chain A, Crystal Structure Of Human Microsomal P450 1a2 In Complex
With Alpha-Naphthoflavone
Length = 495
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 75/355 (21%), Positives = 153/355 (43%), Gaps = 44/355 (12%)
Query: 37 LKANIERSLSLPPGPWKLPIIGNLHHLVGSLPHHRLRNLANNYGPIMYLQIGEHPTILVS 96
L+ + + L PP PW P++G++ L G PH L ++ YG ++ ++IG P +++S
Sbjct: 7 LRPRVPKGLKSPPEPWGWPLLGHVLTL-GKNPHLALSRMSQRYGDVLQIRIGSTPVLVLS 65
Query: 97 SPQSAKGVMQTHDEFFATRVETVATKIMTYDFSAVSFAP-YGEQWIELRKLC-----TME 150
+ + + + F R + + ++T D +++F+ G W R+L T
Sbjct: 66 RLDTIRQALVRQGDDFKGRPDLYTSTLIT-DGQSLTFSTDSGPVWAARRRLAQNALNTFS 124
Query: 151 LSSKKRDQSFRYDREEEVSEVIRSIASK-----AGS---------VTNLSDIVSSLAYNL 196
++S S Y EE VS+ +++ S+ AG V ++++++ ++ +
Sbjct: 125 IASDPASSSSCY-LEEHVSKEAKALISRLQELMAGPGHFDPYNQVVVSVANVIGAMCFGQ 183
Query: 197 FLKIA-------------FLAAAGS-NTADLFPSIKFLQLIAGVKSQVEKIHQQADKIIS 242
+ F+ A S N D FP +++L A + + +Q+ +
Sbjct: 184 HFPESSDEMLSLVKNTHEFVETASSGNPLDFFPILRYLPNPA--LQRFKAFNQRFLWFLQ 241
Query: 243 NIIEERETRLKTGKSEEDGDLVDVLLRDQENGNLQFPMTIKTIKAV--IFEIFAAGTDSS 300
++E D+ L + + G I K V + +IF AG D+
Sbjct: 242 KTVQEHYQDFDKNSVR---DITGALFKHSKKGPRASGNLIPQEKIVNLVNDIFGAGFDTV 298
Query: 301 AIAIDRALSEIIKNPRVPKRVQGEVREVFNRKGKVDETGIEELQFLKLVIKETLK 355
AI +L ++ P + +++Q E+ V R+ + + +L +L+ I ET +
Sbjct: 299 TTAISWSLMYLVTKPEIQRKIQKELDTVIGRERRPRLSDRPQLPYLEAFILETFR 353
>pdb|1R9O|A Chain A, Crystal Structure Of P4502c9 With Flurbiprofen Bound
Length = 477
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 70/309 (22%), Positives = 131/309 (42%), Gaps = 28/309 (9%)
Query: 47 LPPGPWKLPIIGNLHHLVGSLPHHRLRNLANNYGPIMYLQIGEHPTILVSSPQSAKGVMQ 106
LPPGP LP+IGN+ + L NL+ YGP+ L G P +++ ++ K +
Sbjct: 12 LPPGPTPLPVIGNILQIGIKDISKSLTNLSKVYGPVFTLYFGLKPIVVLHGYEAVKEALI 71
Query: 107 THDEFFATRVETVATKIMTYDFSAVSFAPYGEQWIELRKLCTMELSSKKRDQSFRYDR-E 165
E F+ R + F V F+ G++W E+R+ M L + + DR +
Sbjct: 72 DLGEEFSGRGIFPLAERANRGFGIV-FS-NGKKWKEIRRFSLMTLRNFGMGKRSIEDRVQ 129
Query: 166 EEVSEVIRSIASKAGSVTNLSDIVSSLAYNLFLKIAF--------------LAAAGSNTA 211
EE ++ + S + + I+ N+ I F + N
Sbjct: 130 EEARCLVEELRKTKASPCDPTFILGCAPCNVICSIIFHKRFDYKDQQFLNLMEKLNENIK 189
Query: 212 DLFPSIKFLQLIAGVKSQVEKIHQQADKIISNIIEERETRLKTGKSEEDG-------DLV 264
L S ++Q+ ++ +K++ N+ + L+ K ++ D +
Sbjct: 190 IL--SSPWIQICNNFSPIIDYFPGTHNKLLKNVAFMKSYILEKVKEHQESMDMNNPQDFI 247
Query: 265 DVLLR--DQENGNLQFPMTIKTIKAVIFEIFAAGTDSSAIAIDRALSEIIKNPRVPKRVQ 322
D L ++E N TI++++ ++F AGT++++ + AL ++K+P V +VQ
Sbjct: 248 DCFLMKMEKEKHNQPSEFTIESLENTAVDLFGAGTETTSTTLRYALLLLLKHPEVTAKVQ 307
Query: 323 GEVREVFNR 331
E+ V R
Sbjct: 308 EEIERVIGR 316
>pdb|1PQ2|A Chain A, Crystal Structure Of Human Drug Metabolizing Cytochrome
P450 2c8
pdb|1PQ2|B Chain B, Crystal Structure Of Human Drug Metabolizing Cytochrome
P450 2c8
pdb|2NNH|A Chain A, Cyp2c8dh Complexed With 2 Molecules Of 9-Cis Retinoic Acid
pdb|2NNH|B Chain B, Cyp2c8dh Complexed With 2 Molecules Of 9-Cis Retinoic Acid
pdb|2NNI|A Chain A, Cyp2c8dh Complexed With Montelukast
pdb|2NNJ|A Chain A, Cyp2c8dh Complexed With Felodipine
pdb|2VN0|A Chain A, Cyp2c8dh Complexed With Troglitazone
Length = 476
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/307 (20%), Positives = 129/307 (42%), Gaps = 24/307 (7%)
Query: 47 LPPGPWKLPIIGNLHHLVGSLPHHRLRNLANNYGPIMYLQIGEHPTILVSSPQSAKGVMQ 106
LPPGP LPIIGN+ + N + YGP+ + G +P ++ ++ K +
Sbjct: 11 LPPGPTPLPIIGNMLQIDVKDICKSFTNFSKVYGPVFTVYFGMNPIVVFHGYEAVKEALI 70
Query: 107 THDEFFATRVETVATKIMTYDFSAVSFAPYGEQWIELRKLCTMELSSKKRDQSFRYDR-E 165
+ E F+ R + ++ +T +S G++W E+R+ L + + DR +
Sbjct: 71 DNGEEFSGRGNSPISQRITKGLGIIS--SNGKRWKEIRRFSLTTLRNFGMGKRSIEDRVQ 128
Query: 166 EEVSEVIRSIASKAGSVTNLSDIVSSLAYNLFLKIAFLAAAGSNTADLFPSIK------- 218
EE ++ + S + + I+ N+ + F + +K
Sbjct: 129 EEAHCLVEELRKTKASPCDPTFILGCAPCNVICSVVFQKRFDYKDQNFLTLMKRFNENFR 188
Query: 219 -----FLQLIAGVKSQVEKIHQQADKIISNIIEER---ETRLKTGKSEED----GDLVDV 266
++Q+ ++ +K++ N+ R ++K ++ D D +D
Sbjct: 189 ILNSPWIQVCNNFPLLIDCFPGTHNKVLKNVALTRSYIREKVKEHQASLDVNNPRDFIDC 248
Query: 267 LL--RDQENGNLQFPMTIKTIKAVIFEIFAAGTDSSAIAIDRALSEIIKNPRVPKRVQGE 324
L +QE N + I+ + + ++F AGT++++ + L ++K+P V +VQ E
Sbjct: 249 FLIKMEQEKDNQKSEFNIENLVGTVADLFVAGTETTSTTLRYGLLLLLKHPEVTAKVQEE 308
Query: 325 VREVFNR 331
+ V R
Sbjct: 309 IDHVIGR 315
>pdb|4H1N|A Chain A, Crystal Structure Of P450 2b4 F297a Mutant In Complex With
Anti- Platelet Drug Clopidogrel
Length = 479
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 88/405 (21%), Positives = 160/405 (39%), Gaps = 74/405 (18%)
Query: 47 LPPGPWKLPIIGNLHHLVGSLPHHRLRNLANNYGPIMYLQIGEHPTILVSSPQSAKGVMQ 106
LPPGP LP++GNL + L YG + + +G P +++ + + +
Sbjct: 11 LPPGPSPLPVLGNLLQMDRKGLLRSFLRLREKYGDVFTVYLGSRPVVVLCGTDAIREALV 70
Query: 107 THDEFFATRVETVATKIMTYDFSAVSFAPYGEQWIELRK--LCTM-ELSSKKRDQSFRYD 163
E F+ R + +A + V FA GE+W LR+ L TM + KR R
Sbjct: 71 DQAEAFSGRGK-IAVVDPIFQGYGVIFA-NGERWRALRRFSLATMRDFGMGKRSVEERI- 127
Query: 164 REEEVSEVIRSIASKAGSVTNLSDIVSSLAYNLFLKIAF--------------------- 202
+EE ++ + G++ + + + S+ N+ I F
Sbjct: 128 -QEEARCLVEELRKSKGALLDNTLLFHSITSNIICSIVFGKRFDYKDPVFLRLLDLFFQS 186
Query: 203 ---LAAAGSNTADLFPSIKFLQLIAGVKSQVEKIHQQADKIISNIIEERETRLKTGKSEE 259
+++ S +LF FL+ G Q+ + Q+ + I +E+ L
Sbjct: 187 FSLISSFSSQVFELFSG--FLKYFPGTHRQIYRNLQEINTFIGQSVEKHRATLDPSNPR- 243
Query: 260 DGDLVDVLL----RDQENGNLQFPMTIKTIKAVIFEIFAAGTDSSAIAIDRALSEIIKNP 315
D +DV L +D+ + + +F + + + +FAAGT++++ + ++K P
Sbjct: 244 --DFIDVYLLRMEKDKSDPSSEFHH--QNLILTVLSLFAAGTETTSTTLRYGFLLMLKYP 299
Query: 316 RVPKRVQGEVREVFN------------------------RKGK-----VDETGIEELQFL 346
V +RVQ E+ +V R G V T ++ QF
Sbjct: 300 HVTERVQKEIEQVIGSHRPPALDDRAKMPYTDAVIHEIQRLGDLIPFGVPHTVTKDTQFR 359
Query: 347 KLVIKETLKLHPPGSL---DPKYWTEPESFILERFPDSSINFQVN 388
VI + ++ P S DP+Y+ P +F F D++ + N
Sbjct: 360 GYVIPKNTEVFPVLSSALHDPRYFETPNTFNPGHFLDANGALKRN 404
>pdb|1OG2|A Chain A, Structure Of Human Cytochrome P450 Cyp2c9
pdb|1OG2|B Chain B, Structure Of Human Cytochrome P450 Cyp2c9
pdb|1OG5|A Chain A, Structure Of Human Cytochrome P450 Cyp2c9
pdb|1OG5|B Chain B, Structure Of Human Cytochrome P450 Cyp2c9
Length = 475
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 69/308 (22%), Positives = 131/308 (42%), Gaps = 28/308 (9%)
Query: 48 PPGPWKLPIIGNLHHLVGSLPHHRLRNLANNYGPIMYLQIGEHPTILVSSPQSAKGVMQT 107
PPGP LP+IGN+ + L NL+ YGP+ L G P +++ ++ K +
Sbjct: 11 PPGPTPLPVIGNILQIGIKDISKSLTNLSKVYGPVFTLYFGLKPIVVLHGYEAVKEALID 70
Query: 108 HDEFFATRVETVATKIMTYDFSAVSFAPYGEQWIELRKLCTMELSSKKRDQSFRYDR-EE 166
E F+ R + F V F+ G++W E+R+ M L + + DR +E
Sbjct: 71 LGEEFSGRGIFPLAERANRGFGIV-FS-NGKKWKEIRRFSLMTLRNFGMGKRSIEDRVQE 128
Query: 167 EVSEVIRSIASKAGSVTNLSDIVSSLAYNLFLKIAF--------------LAAAGSNTAD 212
E ++ + S + + I+ N+ I F + N
Sbjct: 129 EARCLVEELRKTKASPCDPTFILGCAPCNVICSIIFHKRFDYKDQQFLNLMEKLNENIEI 188
Query: 213 LFPSIKFLQLIAGVKSQVEKIHQQADKIISNIIEERETRLKTGKSEEDG-------DLVD 265
L S ++Q+ + ++ +K++ N+ + L+ K ++ D +D
Sbjct: 189 L--SSPWIQVYNNFPALLDYFPGTHNKLLKNVAFMKSYILEKVKEHQESMDMNNPQDFID 246
Query: 266 VLLR--DQENGNLQFPMTIKTIKAVIFEIFAAGTDSSAIAIDRALSEIIKNPRVPKRVQG 323
L ++E N TI++++ ++F AGT++++ + AL ++K+P V +VQ
Sbjct: 247 CFLMKMEKEKHNQPSEFTIESLENTAVDLFGAGTETTSTTLRYALLLLLKHPEVTAKVQE 306
Query: 324 EVREVFNR 331
E+ V R
Sbjct: 307 EIERVIGR 314
>pdb|1SUO|A Chain A, Structure Of Mammalian Cytochrome P450 2b4 With Bound
4-(4- Chlorophenyl)imidazole
pdb|2BDM|A Chain A, Structure Of Cytochrome P450 2b4 With Bound Bifonazole
pdb|3G5N|A Chain A, Triple Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G5N|B Chain B, Triple Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G5N|C Chain C, Triple Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G5N|D Chain D, Triple Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G93|A Chain A, Single Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G93|B Chain B, Single Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G93|C Chain C, Single Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G93|D Chain D, Single Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3KW4|A Chain A, Crystal Structure Of Cytochrome 2b4 In Complex With The
Anti-Platelet Drug Ticlopidine
pdb|3ME6|A Chain A, Crystal Structure Of Cytochrome 2b4 In Complex With The
Anti-Platelet Drug Clopidogrel
pdb|3ME6|B Chain B, Crystal Structure Of Cytochrome 2b4 In Complex With The
Anti-Platelet Drug Clopidogrel
pdb|3ME6|C Chain C, Crystal Structure Of Cytochrome 2b4 In Complex With The
Anti-Platelet Drug Clopidogrel
pdb|3ME6|D Chain D, Crystal Structure Of Cytochrome 2b4 In Complex With The
Anti-Platelet Drug Clopidogrel
pdb|3MVR|A Chain A, Crystal Structure Of Cytochrome P450 2b4-H226y In A Closed
Conformation
pdb|3MVR|B Chain B, Crystal Structure Of Cytochrome P450 2b4-H226y In A Closed
Conformation
pdb|3R1A|A Chain A, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|B Chain B, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|C Chain C, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|D Chain D, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|E Chain E, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|F Chain F, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|G Chain G, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|H Chain H, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1B|A Chain A, Open Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1B|B Chain B, Open Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1B|C Chain C, Open Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1B|D Chain D, Open Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3TMZ|A Chain A, Crystal Structure Of P450 2b4(H226y) In Complex With
Amlodipine
pdb|3UAS|A Chain A, Cytochrome P450 2b4 Covalently Bound To The
Mechanism-based Inactivator 9-ethynylphenanthrene
Length = 476
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 87/405 (21%), Positives = 159/405 (39%), Gaps = 74/405 (18%)
Query: 47 LPPGPWKLPIIGNLHHLVGSLPHHRLRNLANNYGPIMYLQIGEHPTILVSSPQSAKGVMQ 106
LPPGP LP++GNL + L YG + + +G P +++ + + +
Sbjct: 11 LPPGPSPLPVLGNLLQMDRKGLLRSFLRLREKYGDVFTVYLGSRPVVVLCGTDAIREALV 70
Query: 107 THDEFFATRVETVATKIMTYDFSAVSFAPYGEQWIELRK--LCTM-ELSSKKRDQSFRYD 163
E F+ R + +A + V FA GE+W LR+ L TM + KR R
Sbjct: 71 DQAEAFSGRGK-IAVVDPIFQGYGVIFA-NGERWRALRRFSLATMRDFGMGKRSVEERI- 127
Query: 164 REEEVSEVIRSIASKAGSVTNLSDIVSSLAYNLFLKIAF--------------------- 202
+EE ++ + G++ + + + S+ N+ I F
Sbjct: 128 -QEEARCLVEELRKSKGALLDNTLLFHSITSNIICSIVFGKRFDYKDPVFLRLLDLFFQS 186
Query: 203 ---LAAAGSNTADLFPSIKFLQLIAGVKSQVEKIHQQADKIISNIIEERETRLKTGKSEE 259
+++ S +LF FL+ G Q+ + Q+ + I +E+ L
Sbjct: 187 FSLISSFSSQVFELFSG--FLKYFPGTHRQIYRNLQEINTFIGQSVEKHRATLDPSNPR- 243
Query: 260 DGDLVDVLL----RDQENGNLQFPMTIKTIKAVIFEIFAAGTDSSAIAIDRALSEIIKNP 315
D +DV L +D+ + + +F + + + +F AGT++++ + ++K P
Sbjct: 244 --DFIDVYLLRMEKDKSDPSSEFHH--QNLILTVLSLFFAGTETTSTTLRYGFLLMLKYP 299
Query: 316 RVPKRVQGEVREVFN------------------------RKGK-----VDETGIEELQFL 346
V +RVQ E+ +V R G V T ++ QF
Sbjct: 300 HVTERVQKEIEQVIGSHRPPALDDRAKMPYTDAVIHEIQRLGDLIPFGVPHTVTKDTQFR 359
Query: 347 KLVIKETLKLHPPGS---LDPKYWTEPESFILERFPDSSINFQVN 388
VI + ++ P S DP+Y+ P +F F D++ + N
Sbjct: 360 GYVIPKNTEVFPVLSSALHDPRYFETPNTFNPGHFLDANGALKRN 404
>pdb|2Q6N|A Chain A, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|B Chain B, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|C Chain C, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|D Chain D, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|E Chain E, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|F Chain F, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|G Chain G, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
Length = 478
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 87/405 (21%), Positives = 159/405 (39%), Gaps = 74/405 (18%)
Query: 47 LPPGPWKLPIIGNLHHLVGSLPHHRLRNLANNYGPIMYLQIGEHPTILVSSPQSAKGVMQ 106
LPPGP LP++GNL + L YG + + +G P +++ + + +
Sbjct: 11 LPPGPSPLPVLGNLLQMDRKGLLRSFLRLREKYGDVFTVYLGSRPVVVLCGTDAIREALV 70
Query: 107 THDEFFATRVETVATKIMTYDFSAVSFAPYGEQWIELRK--LCTM-ELSSKKRDQSFRYD 163
E F+ R + +A + V FA GE+W LR+ L TM + KR R
Sbjct: 71 DQAEAFSGRGK-IAVVDPIFQGYGVIFA-NGERWRALRRFSLATMRDFGMGKRSVEERI- 127
Query: 164 REEEVSEVIRSIASKAGSVTNLSDIVSSLAYNLFLKIAF--------------------- 202
+EE ++ + G++ + + + S+ N+ I F
Sbjct: 128 -QEEARCLVEELRKSKGALLDNTLLFHSITSNIICSIVFGKRFDYKDPVFLRLLDLFFQS 186
Query: 203 ---LAAAGSNTADLFPSIKFLQLIAGVKSQVEKIHQQADKIISNIIEERETRLKTGKSEE 259
+++ S +LF FL+ G Q+ + Q+ + I +E+ L
Sbjct: 187 FSLISSFSSQVFELFSG--FLKYFPGTHRQIYRNLQEINTFIGQSVEKHRATLDPSNPR- 243
Query: 260 DGDLVDVLL----RDQENGNLQFPMTIKTIKAVIFEIFAAGTDSSAIAIDRALSEIIKNP 315
D +DV L +D+ + + +F + + + +F AGT++++ + ++K P
Sbjct: 244 --DFIDVYLLRMEKDKSDPSSEFHH--QNLILTVLSLFFAGTETTSTTLRYGFLLMLKYP 299
Query: 316 RVPKRVQGEVREVFN------------------------RKGK-----VDETGIEELQFL 346
V +RVQ E+ +V R G V T ++ QF
Sbjct: 300 HVTERVQKEIEQVIGSHRPPALDDRAKMPYTDAVIHEIQRLGDLIPFGVPHTVTKDTQFR 359
Query: 347 KLVIKETLKLHPPGSL---DPKYWTEPESFILERFPDSSINFQVN 388
VI + ++ P S DP+Y+ P +F F D++ + N
Sbjct: 360 GYVIPKNTEVFPVLSSALHDPRYFETPNTFNPGHFLDANGALKRN 404
>pdb|3TK3|A Chain A, Cytochrome P450 2b4 Mutant L437a In Complex With
4-(4-Chlorophenyl) Imidazole
pdb|3TK3|B Chain B, Cytochrome P450 2b4 Mutant L437a In Complex With
4-(4-Chlorophenyl) Imidazole
pdb|3TK3|C Chain C, Cytochrome P450 2b4 Mutant L437a In Complex With
4-(4-Chlorophenyl) Imidazole
pdb|3TK3|D Chain D, Cytochrome P450 2b4 Mutant L437a In Complex With
4-(4-Chlorophenyl) Imidazole
Length = 476
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 87/405 (21%), Positives = 159/405 (39%), Gaps = 74/405 (18%)
Query: 47 LPPGPWKLPIIGNLHHLVGSLPHHRLRNLANNYGPIMYLQIGEHPTILVSSPQSAKGVMQ 106
LPPGP LP++GNL + L YG + + +G P +++ + + +
Sbjct: 11 LPPGPSPLPVLGNLLQMDRKGLLRSFLRLREKYGDVFTVYLGSRPVVVLCGTDAIREALV 70
Query: 107 THDEFFATRVETVATKIMTYDFSAVSFAPYGEQWIELRK--LCTM-ELSSKKRDQSFRYD 163
E F+ R + +A + V FA GE+W LR+ L TM + KR R
Sbjct: 71 DQAEAFSGRGK-IAVVDPIFQGYGVIFA-NGERWRALRRFSLATMRDFGMGKRSVEERI- 127
Query: 164 REEEVSEVIRSIASKAGSVTNLSDIVSSLAYNLFLKIAF--------------------- 202
+EE ++ + G++ + + + S+ N+ I F
Sbjct: 128 -QEEARCLVEELRKSKGALLDNTLLFHSITSNIICSIVFGKRFDYKDPVFLRLLDLFFQS 186
Query: 203 ---LAAAGSNTADLFPSIKFLQLIAGVKSQVEKIHQQADKIISNIIEERETRLKTGKSEE 259
+++ S +LF FL+ G Q+ + Q+ + I +E+ L
Sbjct: 187 FSLISSFSSQVFELFSG--FLKYFPGTHRQIYRNLQEINTFIGQSVEKHRATLDPSNPR- 243
Query: 260 DGDLVDVLL----RDQENGNLQFPMTIKTIKAVIFEIFAAGTDSSAIAIDRALSEIIKNP 315
D +DV L +D+ + + +F + + + +F AGT++++ + ++K P
Sbjct: 244 --DFIDVYLLRMEKDKSDPSSEFHH--QNLILTVLSLFFAGTETTSTTLRYGFLLMLKYP 299
Query: 316 RVPKRVQGEVREVFN------------------------RKGK-----VDETGIEELQFL 346
V +RVQ E+ +V R G V T ++ QF
Sbjct: 300 HVTERVQKEIEQVIGSHRPPALDDRAKMPYTDAVIHEIQRLGDLIPFGVPHTVTKDTQFR 359
Query: 347 KLVIKETLKLHPPGS---LDPKYWTEPESFILERFPDSSINFQVN 388
VI + ++ P S DP+Y+ P +F F D++ + N
Sbjct: 360 GYVIPKNTEVFPVLSSALHDPRYFETPNTFNPGHFLDANGALKRN 404
>pdb|1PO5|A Chain A, Structure Of Mammalian Cytochrome P450 2b4
Length = 476
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 87/405 (21%), Positives = 159/405 (39%), Gaps = 74/405 (18%)
Query: 47 LPPGPWKLPIIGNLHHLVGSLPHHRLRNLANNYGPIMYLQIGEHPTILVSSPQSAKGVMQ 106
LPPGP LP++GNL + L YG + + +G P +++ + + +
Sbjct: 11 LPPGPSPLPVLGNLLQMDRKGLLRSFLRLREKYGDVFTVYLGSRPVVVLCGTDAIREALV 70
Query: 107 THDEFFATRVETVATKIMTYDFSAVSFAPYGEQWIELRK--LCTM-ELSSKKRDQSFRYD 163
E F+ R + +A + V FA GE+W LR+ L TM + KR R
Sbjct: 71 DQAEAFSGRGK-IAVVDPIFQGYGVIFA-NGERWRALRRFSLATMRDFGMGKRSVEERI- 127
Query: 164 REEEVSEVIRSIASKAGSVTNLSDIVSSLAYNLFLKIAF--------------------- 202
+EE ++ + G++ + + + S+ N+ I F
Sbjct: 128 -QEEARCLVEELRKSKGALLDNTLLFHSITSNIICSIVFGKRFDYKDPVFLRLLDLFFQS 186
Query: 203 ---LAAAGSNTADLFPSIKFLQLIAGVKSQVEKIHQQADKIISNIIEERETRLKTGKSEE 259
+++ S +LF FL+ G Q+ + Q+ + I +E+ L
Sbjct: 187 FSLISSFSSQVFELFSG--FLKHFPGTHRQIYRNLQEINTFIGQSVEKHRATLDPSNPR- 243
Query: 260 DGDLVDVLL----RDQENGNLQFPMTIKTIKAVIFEIFAAGTDSSAIAIDRALSEIIKNP 315
D +DV L +D+ + + +F + + + +F AGT++++ + ++K P
Sbjct: 244 --DFIDVYLLRMEKDKSDPSSEFHH--QNLILTVLSLFFAGTETTSTTLRYGFLLMLKYP 299
Query: 316 RVPKRVQGEVREVFN------------------------RKGK-----VDETGIEELQFL 346
V +RVQ E+ +V R G V T ++ QF
Sbjct: 300 HVTERVQKEIEQVIGSHRPPALDDRAKMPYTDAVIHEIQRLGDLIPFGVPHTVTKDTQFR 359
Query: 347 KLVIKETLKLHPPGS---LDPKYWTEPESFILERFPDSSINFQVN 388
VI + ++ P S DP+Y+ P +F F D++ + N
Sbjct: 360 GYVIPKNTEVFPVLSSALHDPRYFETPNTFNPGHFLDANGALKRN 404
>pdb|2P85|A Chain A, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|2P85|B Chain B, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|2P85|C Chain C, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|2P85|D Chain D, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|2P85|E Chain E, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|2P85|F Chain F, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|3T3S|A Chain A, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|B Chain B, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|C Chain C, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|D Chain D, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|E Chain E, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|F Chain F, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|G Chain G, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|H Chain H, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|4EJG|A Chain A, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|B Chain B, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|C Chain C, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|D Chain D, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|E Chain E, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|F Chain F, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|G Chain G, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|H Chain H, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJH|A Chain A, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|B Chain B, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|C Chain C, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|D Chain D, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|E Chain E, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|F Chain F, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|G Chain G, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|H Chain H, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJI|A Chain A, Human Cytochrome P450 2a13 In Complex With Two Molecules
Of 4- (Methylnitrosamino)-1-(3-Puridyl)-1-Butanone
Length = 476
Score = 64.7 bits (156), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 89/406 (21%), Positives = 164/406 (40%), Gaps = 74/406 (18%)
Query: 47 LPPGPWKLPIIGNLHHLVGSLPHHRLRNLANNYGPIMYLQIGEHPTILVSSPQSAKGVMQ 106
LPPGP LP IGN L ++ L ++ YGP+ + +G +++ + K +
Sbjct: 11 LPPGPTPLPFIGNYLQLNTEQMYNSLMKISERYGPVFTIHLGPRRVVVLCGHDAVKEALV 70
Query: 107 THDEFFATRVETVATKIMTYDFSAVSFAPYGEQWIELRKLCTMELSS---KKRDQSFRYD 163
E F+ R E AT + V+F+ GE+ +LR+ L KR R
Sbjct: 71 DQAEEFSGRGEQ-ATFDWLFKGYGVAFS-NGERAKQLRRFSIATLRGFGVGKRGIEERI- 127
Query: 164 REEEVSEVIRSIASKAGSVTN--------LSDIVSSLAYN----------------LFLK 199
+EE +I ++ G+ + +S+++SS+ + +
Sbjct: 128 -QEEAGFLIDALRGTHGANIDPTFFLSRTVSNVISSIVFGDRFDYEDKEFLSLLRMMLGS 186
Query: 200 IAFLAAAGSNTADLFPSIKFLQLIAGVKSQVEKIHQQADKIISNIIEERETRLKTGKSEE 259
F A + ++F S+ ++ + G + Q K Q + I+ +E + L
Sbjct: 187 FQFTATSTGQLYEMFSSV--MKHLPGPQQQAFKELQGLEDFIAKKVEHNQRTLDPNSPR- 243
Query: 260 DGDLVD-VLLRDQE---NGNLQFPMTIKTIKAVIFEIFAAGTDSSAIAIDRALSEIIKNP 315
D +D L+R QE N N +F +K + +F AGT++ + + ++K+P
Sbjct: 244 --DFIDSFLIRMQEEEKNPNTEF--YLKNLVMTTLNLFFAGTETVSTTLRYGFLLLMKHP 299
Query: 316 RVPKRVQGEVREVF--NRKGKVD--------ETGIEELQ-------------------FL 346
V +V E+ V NR+ K + E I E+Q F
Sbjct: 300 EVEAKVHEEIDRVIGKNRQPKFEDRAKMPYTEAVIHEIQRFGDMLPMGLAHRVNKDTKFR 359
Query: 347 KLVIKETLKLHPP-GSL--DPKYWTEPESFILERFPDSSINFQVNN 389
+ + ++ P GS+ DP++++ P F + F D F+ ++
Sbjct: 360 DFFLPKGTEVFPMLGSVLRDPRFFSNPRDFNPQHFLDKKGQFKKSD 405
>pdb|3EBS|A Chain A, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
With Phenacetin
pdb|3EBS|B Chain B, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
With Phenacetin
pdb|3EBS|C Chain C, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
With Phenacetin
pdb|3EBS|D Chain D, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
With Phenacetin
pdb|3T3Q|A Chain A, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
WITH Pilocarpine
pdb|3T3Q|B Chain B, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
WITH Pilocarpine
pdb|3T3Q|C Chain C, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
WITH Pilocarpine
pdb|3T3Q|D Chain D, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
WITH Pilocarpine
Length = 476
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 74/339 (21%), Positives = 144/339 (42%), Gaps = 46/339 (13%)
Query: 47 LPPGPWKLPIIGNLHHLVGSLPHHRLRNLANNYGPIMYLQIGEHPTILVSSPQSAKGVMQ 106
LPPGP LP IGN L ++ L ++ YGP+ + +G +++ + + +
Sbjct: 11 LPPGPTPLPFIGNYLQLNTEQMYNSLMKISERYGPVFTIHLGPRRVVVLCGHDAVREALV 70
Query: 107 THDEFFATRVETVATKIMTYDFSAVSFAPYGEQWIELRKLCTMELSS---KKRDQSFRYD 163
E F+ R E AT + V F+ GE+ +LR+ L KR R
Sbjct: 71 DQAEEFSGRGEQ-ATFDWVFKGYGVVFS-NGERAKQLRRFSIATLRDFGVGKRGIEERI- 127
Query: 164 REEEVSEVIRSIASKAGSVTN--------LSDIVSSLAYN----------------LFLK 199
+EE +I ++ G+ + +S+++SS+ + +
Sbjct: 128 -QEEAGFLIDALRGTGGANIDPTFFLSRTVSNVISSIVFGDRFDYKDKEFLSLLRMMLGS 186
Query: 200 IAFLAAAGSNTADLFPSIKFLQLIAGVKSQVEKIHQQADKIISNIIEERETRLKTGKSEE 259
F + + ++F S+ ++ + G + Q ++ Q + I+ +E + L
Sbjct: 187 FQFTSTSTGQLYEMFSSV--MKHLPGPQQQAFQLLQGLEDFIAKKVEHNQRTLDPNSPR- 243
Query: 260 DGDLVD-VLLRDQE---NGNLQFPMTIKTIKAVIFEIFAAGTDSSAIAIDRALSEIIKNP 315
D +D L+R QE N N +F +K + +F AGT++ + + ++K+P
Sbjct: 244 --DFIDSFLIRMQEEEKNPNTEF--YLKNLVMTTLNLFFAGTETVSTTLRYGFLLLMKHP 299
Query: 316 RVPKRVQGEVREVF--NRKGKVDETGIEELQFLKLVIKE 352
V +V E+ V NR+ K ++ ++ +++ VI E
Sbjct: 300 EVEAKVHEEIDRVIGKNRQPKFEDRA--KMPYMEAVIHE 336
>pdb|2PG7|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 N297qI300V
pdb|2PG7|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 N297qI300V
pdb|2PG7|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 N297qI300V
pdb|2PG7|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 N297qI300V
Length = 476
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 75/339 (22%), Positives = 146/339 (43%), Gaps = 46/339 (13%)
Query: 47 LPPGPWKLPIIGNLHHLVGSLPHHRLRNLANNYGPIMYLQIGEHPTILVSSPQSAKGVMQ 106
LPPGP LP IGN L ++ L ++ YGP+ + +G +++ + + +
Sbjct: 11 LPPGPTPLPFIGNYLQLNTEQMYNSLMKISERYGPVFTIHLGPRRVVVLCGHDAVREALV 70
Query: 107 THDEFFATRVETVATKIMTYDFSAVSFAPYGEQWIELRKLCTMELSS---KKRDQSFRYD 163
E F+ R E AT + V F+ GE+ +LR+ L KR R
Sbjct: 71 DQAEEFSGRGEQ-ATFDWVFKGYGVVFS-NGERAKQLRRFSIATLRDFGVGKRGIEERI- 127
Query: 164 REEEVSEVIRSIASKAGSVTN--------LSDIVSSLAYN---------------LFLKI 200
+EE +I ++ G+ + +S+++SS+ + + L I
Sbjct: 128 -QEEAGFLIDALRGTGGANIDPTFFLSRTVSNVISSIVFGDRFDYKDKEFLSLLRMMLGI 186
Query: 201 -AFLAAAGSNTADLFPSIKFLQLIAGVKSQVEKIHQQADKIISNIIEERETRLKTGKSEE 259
F + + ++F S+ ++ + G + Q ++ Q + I+ +E + L
Sbjct: 187 FQFTSTSTGQLYEMFSSV--MKHLPGPQQQAFQLLQGLEDFIAKKVEHNQRTLDPNSPR- 243
Query: 260 DGDLVD-VLLRDQE---NGNLQFPMTIKTIKAVIFEIFAAGTDSSAIAIDRALSEIIKNP 315
D +D L+R QE N N +F +K + ++F GT++ + + ++K+P
Sbjct: 244 --DFIDSFLIRMQEEEKNPNTEF--YLKNLVMTTLQLFVGGTETVSTTLRYGFLLLMKHP 299
Query: 316 RVPKRVQGEVREVF--NRKGKVDETGIEELQFLKLVIKE 352
V +V E+ V NR+ K ++ ++ +++ VI E
Sbjct: 300 EVEAKVHEEIDRVIGKNRQPKFEDRA--KMPYMEAVIHE 336
>pdb|3E4E|A Chain A, Human Cytochrome P450 2e1 In Complex With The Inhibitor 4-
Methylpyrazole
pdb|3E4E|B Chain B, Human Cytochrome P450 2e1 In Complex With The Inhibitor 4-
Methylpyrazole
pdb|3E6I|A Chain A, Human Cytochrome P450 2e1 In Complex With The Inhibitor
Indazole
pdb|3E6I|B Chain B, Human Cytochrome P450 2e1 In Complex With The Inhibitor
Indazole
pdb|3GPH|A Chain A, Human Cytochrome P450 2e1 In Complex With
Omega-Imidazolyl-Decanoic Acid
pdb|3GPH|B Chain B, Human Cytochrome P450 2e1 In Complex With
Omega-Imidazolyl-Decanoic Acid
pdb|3KOH|A Chain A, Cytochrome P450 2e1 With Omega-Imidazolyl Octanoic Acid
pdb|3KOH|B Chain B, Cytochrome P450 2e1 With Omega-Imidazolyl Octanoic Acid
pdb|3LC4|A Chain A, Human Cytochrome P450 2e1 In Complex With
Omega-Imidazolyl-Dodecanoic Acid
pdb|3LC4|B Chain B, Human Cytochrome P450 2e1 In Complex With
Omega-Imidazolyl-Dodecanoic Acid
pdb|3T3Z|A Chain A, Human Cytochrome P450 2e1 In Complex With Pilocarpine
pdb|3T3Z|B Chain B, Human Cytochrome P450 2e1 In Complex With Pilocarpine
pdb|3T3Z|C Chain C, Human Cytochrome P450 2e1 In Complex With Pilocarpine
pdb|3T3Z|D Chain D, Human Cytochrome P450 2e1 In Complex With Pilocarpine
Length = 476
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 72/331 (21%), Positives = 137/331 (41%), Gaps = 31/331 (9%)
Query: 47 LPPGPWKLPIIGNLHHL-VGSLPHHRLRNLANNYGPIMYLQIGEHPTILVSSPQSAKGVM 105
LPPGP+ LPIIGNL L + ++P R LA +GP+ L +G +++ ++ K +
Sbjct: 11 LPPGPFPLPIIGNLFQLELKNIPKSFTR-LAQRFGPVFTLYVGSQRMVVMHGYKAVKEAL 69
Query: 106 QTHDEFFATRVETVATKIMTYDFSAVSFAPYGEQWIELRKLCTMELSS---KKRDQSFRY 162
+ + F+ R + A + + F G W ++R+ L + K+ R
Sbjct: 70 LDYKDEFSGRGDLPA--FHAHRDRGIIFN-NGPTWKDIRRFSLTTLRNYGMGKQGNESRI 126
Query: 163 DREEEVSEVIRSIASKAGSVTNLSDIVSSLAYNLFLKIAFLAAAGSNTADLFP------- 215
RE ++ ++ G + + ++ N+ I F N
Sbjct: 127 QREAHF--LLEALRKTQGQPFDPTFLIGCAPCNVIADILFRKHFDYNDEKFLRLMYLFNE 184
Query: 216 -----SIKFLQLIAGVKSQVEKIHQQADKIISNIIEERE---TRLKTGKSEEDG----DL 263
S +LQL S + + K+I N+ E +E R+K D DL
Sbjct: 185 NFHLLSTPWLQLYNNFPSFLHYLPGSHRKVIKNVAEVKEYVSERVKEHHQSLDPNCPRDL 244
Query: 264 VDVLL--RDQENGNLQFPMTIKTIKAVIFEIFAAGTDSSAIAIDRALSEIIKNPRVPKRV 321
D LL ++E + + T+ I + ++F AGT++++ + L ++K P + +++
Sbjct: 245 TDCLLVEMEKEKHSAERLYTMDGITVTVADLFFAGTETTSTTLRYGLLILMKYPEIEEKL 304
Query: 322 QGEVREVFNRKGKVDETGIEELQFLKLVIKE 352
E+ V +E+ ++ V+ E
Sbjct: 305 HEEIDRVIGPSRIPAIKDRQEMPYMDAVVHE 335
>pdb|4GQS|A Chain A, Structure Of Human Microsomal Cytochrome P450 (cyp) 2c19
pdb|4GQS|B Chain B, Structure Of Human Microsomal Cytochrome P450 (cyp) 2c19
pdb|4GQS|C Chain C, Structure Of Human Microsomal Cytochrome P450 (cyp) 2c19
pdb|4GQS|D Chain D, Structure Of Human Microsomal Cytochrome P450 (cyp) 2c19
Length = 477
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 86/398 (21%), Positives = 157/398 (39%), Gaps = 56/398 (14%)
Query: 47 LPPGPWKLPIIGNLHHLVGSLPHHRLRNLANNYGPIMYLQIGEHPTILVSSPQSAKGVMQ 106
LPPGP LP+IGN+ + L NL+ YGP+ L G +++ + K +
Sbjct: 12 LPPGPTPLPVIGNILQIDIKDVSKSLTNLSKIYGPVFTLYFGLERMVVLHGYEVVKEALI 71
Query: 107 THDEFFATRVETVATKIMTYDFSAVSFAPYGEQWIELRKLCTMELSSKKRDQSFRYDR-E 165
E F+ R + F V F+ G++W E+R+ M L + + DR +
Sbjct: 72 DLGEEFSGRGHFPLAERANRGFGIV-FS-NGKRWKEIRRFSLMTLRNFGMGKRSIEDRVQ 129
Query: 166 EEVSEVIRSIASKAGSVTNLSDIVSSLAYNLFLKIAFLAAAGSNTADLFP---------- 215
EE ++ + S + + I+ N+ I F
Sbjct: 130 EEARCLVEELRKTKASPCDPTFILGCAPCNVICSIIFQKRFDYKDQQFLNLMEKLNENIR 189
Query: 216 --SIKFLQLIAGVKSQVEKIHQQADKIISN-------IIEERETRLKTGKSEEDGDLVDV 266
S ++Q+ + ++ +K++ N I+E+ + ++ D +D
Sbjct: 190 IVSTPWIQICNNFPTIIDYFPGTHNKLLKNLAFMESDILEKVKEHQESMDINNPRDFIDC 249
Query: 267 LL--RDQENGNLQFPMTIKTIKAVIFEIFAAGTDSSAIAIDRALSEIIKNPRVPKRVQGE 324
L ++E N Q TI+ + ++ AGT++++ + AL ++K+P V +VQ E
Sbjct: 250 FLIKMEKEKQNQQSEFTIENLVITAADLLGAGTETTSTTLRYALLLLLKHPEVTAKVQEE 309
Query: 325 VREVF--NRKGKVDETG--------IEELQ-FLKLV-----------IKETLKLHPPGSL 362
+ V NR + + G + E+Q ++ L+ +K L P G+
Sbjct: 310 IERVVGRNRSPCMQDRGHMPYTDAVVHEVQRYIDLIPTSLPHAVTCDVKFRNYLIPKGTT 369
Query: 363 ----------DPKYWTEPESFILERFPDSSINFQVNNF 390
D K + PE F F D NF+ +N+
Sbjct: 370 ILTSLTSVLHDNKEFPNPEMFDPRHFLDEGGNFKKSNY 407
>pdb|2PG5|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 N297q
pdb|2PG5|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 N297q
pdb|2PG5|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 N297q
pdb|2PG5|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 N297q
Length = 476
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 75/339 (22%), Positives = 146/339 (43%), Gaps = 46/339 (13%)
Query: 47 LPPGPWKLPIIGNLHHLVGSLPHHRLRNLANNYGPIMYLQIGEHPTILVSSPQSAKGVMQ 106
LPPGP LP IGN L ++ L ++ YGP+ + +G +++ + + +
Sbjct: 11 LPPGPTPLPFIGNYLQLNTEQMYNSLMKISERYGPVFTIHLGPRRVVVLCGHDAVREALV 70
Query: 107 THDEFFATRVETVATKIMTYDFSAVSFAPYGEQWIELRKLCTMELSS---KKRDQSFRYD 163
E F+ R E AT + V F+ GE+ +LR+ L KR R
Sbjct: 71 DQAEEFSGRGEQ-ATFDWVFKGYGVVFS-NGERAKQLRRFSIATLRDFGVGKRGIEERI- 127
Query: 164 REEEVSEVIRSIASKAGSVTN--------LSDIVSSLAYN---------------LFLKI 200
+EE +I ++ G+ + +S+++SS+ + + L I
Sbjct: 128 -QEEAGFLIDALRGTGGANIDPTFFLSRTVSNVISSIVFGDRFDYKDKEFLSLLRMMLGI 186
Query: 201 -AFLAAAGSNTADLFPSIKFLQLIAGVKSQVEKIHQQADKIISNIIEERETRLKTGKSEE 259
F + + ++F S+ ++ + G + Q ++ Q + I+ +E + L
Sbjct: 187 FQFTSTSTGQLYEMFSSV--MKHLPGPQQQAFQLLQGLEDFIAKKVEHNQRTLDPNSPR- 243
Query: 260 DGDLVD-VLLRDQE---NGNLQFPMTIKTIKAVIFEIFAAGTDSSAIAIDRALSEIIKNP 315
D +D L+R QE N N +F +K + ++F GT++ + + ++K+P
Sbjct: 244 --DFIDSFLIRMQEEEKNPNTEF--YLKNLVMTTLQLFIGGTETVSTTLRYGFLLLMKHP 299
Query: 316 RVPKRVQGEVREVF--NRKGKVDETGIEELQFLKLVIKE 352
V +V E+ V NR+ K ++ ++ +++ VI E
Sbjct: 300 EVEAKVHEEIDRVIGKNRQPKFEDRA--KMPYMEAVIHE 336
>pdb|2Q9F|A Chain A, Crystal Structure Of Human Cytochrome P450 46a1 In Complex
With Cholesterol-3-Sulphate
pdb|2Q9G|A Chain A, Crystal Structure Of Human Cytochrome P450 46a1
pdb|3MDM|A Chain A, Thioperamide Complex Of Cytochrome P450 46a1
pdb|3MDR|A Chain A, Tranylcypromine Complex Of Cytochrome P450 46a1
pdb|3MDR|B Chain B, Tranylcypromine Complex Of Cytochrome P450 46a1
pdb|3MDT|A Chain A, Voriconazole Complex Of Cytochrome P450 46a1
pdb|3MDT|B Chain B, Voriconazole Complex Of Cytochrome P450 46a1
pdb|3MDV|A Chain A, Clotrimazole Complex Of Cytochrome P450 46a1
pdb|3MDV|B Chain B, Clotrimazole Complex Of Cytochrome P450 46a1
pdb|4ENH|A Chain A, Crystal Structure Of Human Cytochrome P450 Cyp46a1 With
Fluvoxamine Bound
pdb|4FIA|A Chain A, Crystal Structure Of Human Cyp46a1 P450 With Bicalutamide
Bound
Length = 456
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 69/315 (21%), Positives = 142/315 (45%), Gaps = 41/315 (13%)
Query: 74 NLANNYGPIMYLQIGEHPTILVSSPQSAKGVMQT----HDEFFATRVETVATKIMTYDFS 129
+ A YGP++ + + +++V+SP+S K + + D ++TV + + +
Sbjct: 18 DWAKKYGPVVRVNVFHKTSVIVTSPESVKKFLMSTKYNKDSKMYRALQTVFGERL-FGQG 76
Query: 130 AVSFAPYGEQWIELRKLCTMELSSKKRDQSFRYDREEEVSEVIRSIASKAGSVT--NLSD 187
VS Y E+W + R++ + S + S E+ +++ + +KA T ++ D
Sbjct: 77 LVSECNY-ERWHKQRRVIDLAFS-RSSLVSLMETFNEKAEQLVEILEAKADGQTPVSMQD 134
Query: 188 IVSSLAYNLFLKIAFLAAAGSNTADLFPSIKFL-------------------QLIAGVKS 228
+++ A ++ K AF G T+ L + K L + + G +
Sbjct: 135 MLTYTAMDILAKAAF----GMETSMLLGAQKPLSQAVKLMLEGITASRNTLAKFLPGKRK 190
Query: 229 QVEKIHQQAD---KIISNIIEERETRLKTGKSEEDGDLVDVLLRDQENGNLQFPMTIKTI 285
Q+ ++ + ++ + ++ R LK G+ E D++ +L+ +E + +
Sbjct: 191 QLREVRESIRFLRQVGRDWVQRRREALKRGE-EVPADILTQILKAEEGAQ-----DDEGL 244
Query: 286 KAVIFEIFAAGTDSSAIAIDRALSEIIKNPRVPKRVQGEVREVFNRKGKVDETGIEELQF 345
F AG ++SA + + E+ + P + R+Q EV EV K +D + LQ+
Sbjct: 245 LDNFVTFFIAGHETSANHLAFTVMELSRQPEIVARLQAEVDEVIGSKRYLDFEDLGRLQY 304
Query: 346 LKLVIKETLKLHPPG 360
L V+KE+L+L+PP
Sbjct: 305 LSQVLKESLRLYPPA 319
>pdb|2PG6|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 L240cN297Q
pdb|2PG6|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 L240cN297Q
pdb|2PG6|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 L240cN297Q
pdb|2PG6|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 L240cN297Q
Length = 476
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 75/339 (22%), Positives = 145/339 (42%), Gaps = 46/339 (13%)
Query: 47 LPPGPWKLPIIGNLHHLVGSLPHHRLRNLANNYGPIMYLQIGEHPTILVSSPQSAKGVMQ 106
LPPGP LP IGN L ++ L ++ YGP+ + +G +++ + + +
Sbjct: 11 LPPGPTPLPFIGNYLQLNTEQMYNSLMKISERYGPVFTIHLGPRRVVVLCGHDAVREALV 70
Query: 107 THDEFFATRVETVATKIMTYDFSAVSFAPYGEQWIELRKLCTMELSS---KKRDQSFRYD 163
E F+ R E AT + V F+ GE+ +LR+ L KR R
Sbjct: 71 DQAEEFSGRGEQ-ATFDWVFKGYGVVFS-NGERAKQLRRFSIATLRDFGVGKRGIEERI- 127
Query: 164 REEEVSEVIRSIASKAGSVTN--------LSDIVSSLAYN---------------LFLKI 200
+EE +I ++ G+ + +S+++SS+ + + L I
Sbjct: 128 -QEEAGFLIDALRGTGGANIDPTFFLSRTVSNVISSIVFGDRFDYKDKEFLSLLRMMLGI 186
Query: 201 -AFLAAAGSNTADLFPSIKFLQLIAGVKSQVEKIHQQADKIISNIIEERETRLKTGKSEE 259
F + + ++F S+ ++ + G + Q + Q + I+ +E + L
Sbjct: 187 FQFTSTSTGQLYEMFSSV--MKHLPGPQQQAFQCLQGLEDFIAKKVEHNQRTLDPNSPR- 243
Query: 260 DGDLVD-VLLRDQE---NGNLQFPMTIKTIKAVIFEIFAAGTDSSAIAIDRALSEIIKNP 315
D +D L+R QE N N +F +K + ++F GT++ + + ++K+P
Sbjct: 244 --DFIDSFLIRMQEEEKNPNTEF--YLKNLVMTTLQLFIGGTETVSTTLRYGFLLLMKHP 299
Query: 316 RVPKRVQGEVREVF--NRKGKVDETGIEELQFLKLVIKE 352
V +V E+ V NR+ K ++ ++ +++ VI E
Sbjct: 300 EVEAKVHEEIDRVIGKNRQPKFEDRA--KMPYMEAVIHE 336
>pdb|1Z10|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 With
Coumarin Bound
pdb|1Z10|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 With
Coumarin Bound
pdb|1Z10|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 With
Coumarin Bound
pdb|1Z10|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 With
Coumarin Bound
pdb|1Z11|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 With
Methoxsalen Bound
pdb|1Z11|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 With
Methoxsalen Bound
pdb|1Z11|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 With
Methoxsalen Bound
pdb|1Z11|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 With
Methoxsalen Bound
pdb|2FDU|A Chain A, Microsomal P450 2a6 With The Inhibitor N,N-Dimethyl(5-
(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDU|B Chain B, Microsomal P450 2a6 With The Inhibitor N,N-Dimethyl(5-
(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDU|C Chain C, Microsomal P450 2a6 With The Inhibitor N,N-Dimethyl(5-
(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDU|D Chain D, Microsomal P450 2a6 With The Inhibitor N,N-Dimethyl(5-
(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDV|A Chain A, Microsomal P450 2a6 With The Inhibitor
N-Methyl(5-(Pyridin- 3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDV|B Chain B, Microsomal P450 2a6 With The Inhibitor
N-Methyl(5-(Pyridin- 3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDV|C Chain C, Microsomal P450 2a6 With The Inhibitor
N-Methyl(5-(Pyridin- 3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDV|D Chain D, Microsomal P450 2a6 With The Inhibitor
N-Methyl(5-(Pyridin- 3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDW|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 With The
Inhibitor (5-(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDW|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 With The
Inhibitor (5-(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDW|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 With The
Inhibitor (5-(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDW|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 With The
Inhibitor (5-(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDY|A Chain A, Microsomal P450 2a6 With The Inhibitor Adrithiol Bound
pdb|2FDY|B Chain B, Microsomal P450 2a6 With The Inhibitor Adrithiol Bound
pdb|2FDY|C Chain C, Microsomal P450 2a6 With The Inhibitor Adrithiol Bound
pdb|2FDY|D Chain D, Microsomal P450 2a6 With The Inhibitor Adrithiol Bound
pdb|3T3R|A Chain A, Human Cytochrome P450 2a6 In Complex With Pilocarpine
pdb|3T3R|B Chain B, Human Cytochrome P450 2a6 In Complex With Pilocarpine
pdb|3T3R|C Chain C, Human Cytochrome P450 2a6 In Complex With Pilocarpine
pdb|3T3R|D Chain D, Human Cytochrome P450 2a6 In Complex With Pilocarpine
pdb|4EJJ|A Chain A, Human Cytochrome P450 2a6 In Complex With Nicotine
pdb|4EJJ|B Chain B, Human Cytochrome P450 2a6 In Complex With Nicotine
pdb|4EJJ|C Chain C, Human Cytochrome P450 2a6 In Complex With Nicotine
pdb|4EJJ|D Chain D, Human Cytochrome P450 2a6 In Complex With Nicotine
Length = 476
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 75/339 (22%), Positives = 145/339 (42%), Gaps = 46/339 (13%)
Query: 47 LPPGPWKLPIIGNLHHLVGSLPHHRLRNLANNYGPIMYLQIGEHPTILVSSPQSAKGVMQ 106
LPPGP LP IGN L ++ L ++ YGP+ + +G +++ + + +
Sbjct: 11 LPPGPTPLPFIGNYLQLNTEQMYNSLMKISERYGPVFTIHLGPRRVVVLCGHDAVREALV 70
Query: 107 THDEFFATRVETVATKIMTYDFSAVSFAPYGEQWIELRKLCTMELSS---KKRDQSFRYD 163
E F+ R E AT + V F+ GE+ +LR+ L KR R
Sbjct: 71 DQAEEFSGRGEQ-ATFDWVFKGYGVVFS-NGERAKQLRRFSIATLRDFGVGKRGIEERI- 127
Query: 164 REEEVSEVIRSIASKAGSVTN--------LSDIVSSLAYN---------------LFLKI 200
+EE +I ++ G+ + +S+++SS+ + + L I
Sbjct: 128 -QEEAGFLIDALRGTGGANIDPTFFLSRTVSNVISSIVFGDRFDYKDKEFLSLLRMMLGI 186
Query: 201 -AFLAAAGSNTADLFPSIKFLQLIAGVKSQVEKIHQQADKIISNIIEERETRLKTGKSEE 259
F + + ++F S+ ++ + G + Q ++ Q + I+ +E + L
Sbjct: 187 FQFTSTSTGQLYEMFSSV--MKHLPGPQQQAFQLLQGLEDFIAKKVEHNQRTLDPNSPR- 243
Query: 260 DGDLVD-VLLRDQE---NGNLQFPMTIKTIKAVIFEIFAAGTDSSAIAIDRALSEIIKNP 315
D +D L+R QE N N +F +K + +F GT++ + + ++K+P
Sbjct: 244 --DFIDSFLIRMQEEEKNPNTEF--YLKNLVMTTLNLFIGGTETVSTTLRYGFLLLMKHP 299
Query: 316 RVPKRVQGEVREVF--NRKGKVDETGIEELQFLKLVIKE 352
V +V E+ V NR+ K ++ ++ +++ VI E
Sbjct: 300 EVEAKVHEEIDRVIGKNRQPKFEDRA--KMPYMEAVIHE 336
>pdb|3UA1|A Chain A, Crystal Structure Of The Cytochrome
P4503a4-Bromoergocryptine Complex
pdb|3TJS|A Chain A, Crystal Structure Of The Complex Between Human Cytochrome
P450 3a4 And Desthiazolylmethyloxycarbonyl Ritonavir
Length = 487
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 89/417 (21%), Positives = 168/417 (40%), Gaps = 82/417 (19%)
Query: 49 PGPWKLPIIGNLHHLVGSLPHHRLRNLAN-----NYGPIMYLQIGEHPTILVSSPQSAKG 103
PGP LP +GN+ L +H+ + + YG + G+ P + ++ P K
Sbjct: 19 PGPTPLPFLGNI------LSYHKGFCMFDMECHKKYGKVWGFYDGQQPVLAITDPDMIKT 72
Query: 104 VM-QTHDEFFATRVETVATKIMTYDFSAVSFAPYGEQWIELRKLCTMELSSKKRDQSFRY 162
V+ + F R M SA+S A E+W LR L + +S K +
Sbjct: 73 VLVKECYSVFTNRRPFGPVGFMK---SAISIAE-DEEWKRLRSLLSPTFTSGKLKEMVPI 128
Query: 163 DREEEVSEVIRSIASKA--GSVTNLSDIVSSLAYNLFLKIAFLAAAGS----------NT 210
+ ++R++ +A G L D+ + + ++ +F S NT
Sbjct: 129 IAQYG-DVLVRNLRREAETGKPVTLKDVFGAYSMDVITSTSFGVNIDSLNNPQDPFVENT 187
Query: 211 ADL---------FPSIKFLQLIAGVKSQVEKIHQQA-DKIISNIIEERETRLKTGKSEED 260
L F SI + + +E ++ + ++N + + R+K + E+
Sbjct: 188 KKLLRFDFLDPFFLSITVFPFLIPI---LEVLNICVFPREVTNFLRKSVKRMKESRLEDT 244
Query: 261 G----DLVDVLLRDQENGNLQFPMTIKTIKAV---IFEIFAAGTDSSAIAIDRALSEIIK 313
D + +++ Q + + + ++ V I IFA G ++++ + + E+
Sbjct: 245 QKHRVDFLQLMIDSQNSKETESHKALSDLELVAQSIIFIFA-GYETTSSVLSFIMYELAT 303
Query: 314 NPRVPKRVQGEVREVFNRKGKVDETGIEELQFLKLVIKETLKLHP--------------- 358
+P V +++Q E+ V K + ++++L +V+ ETL+L P
Sbjct: 304 HPDVQQKLQEEIDAVLPNKAPPTYDTVLQMEYLDMVVNETLRLFPIAMRLERVCKKDVEI 363
Query: 359 -----PGSL-----------DPKYWTEPESFILERFPDSSINFQVNNFEYIAFGSVP 399
P + DPKYWTEPE F+ ERF + + ++ + Y FGS P
Sbjct: 364 NGMFIPKGVVVMIPSYALHRDPKYWTEPEKFLPERFSKKNKD-NIDPYIYTPFGSGP 419
>pdb|1TQN|A Chain A, Crystal Structure Of Human Microsomal P450 3a4
Length = 486
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 89/417 (21%), Positives = 168/417 (40%), Gaps = 82/417 (19%)
Query: 49 PGPWKLPIIGNLHHLVGSLPHHRLRNLAN-----NYGPIMYLQIGEHPTILVSSPQSAKG 103
PGP LP +GN+ L +H+ + + YG + G+ P + ++ P K
Sbjct: 18 PGPTPLPFLGNI------LSYHKGFCMFDMECHKKYGKVWGFYDGQQPVLAITDPDMIKT 71
Query: 104 VM-QTHDEFFATRVETVATKIMTYDFSAVSFAPYGEQWIELRKLCTMELSSKKRDQSFRY 162
V+ + F R M SA+S A E+W LR L + +S K +
Sbjct: 72 VLVKECYSVFTNRRPFGPVGFMK---SAISIAE-DEEWKRLRSLLSPTFTSGKLKEMVPI 127
Query: 163 DREEEVSEVIRSIASKA--GSVTNLSDIVSSLAYNLFLKIAFLAAAGS----------NT 210
+ ++R++ +A G L D+ + + ++ +F S NT
Sbjct: 128 IAQYG-DVLVRNLRREAETGKPVTLKDVFGAYSMDVITSTSFGVNIDSLNNPQDPFVENT 186
Query: 211 ADL---------FPSIKFLQLIAGVKSQVEKIHQQA-DKIISNIIEERETRLKTGKSEED 260
L F SI + + +E ++ + ++N + + R+K + E+
Sbjct: 187 KKLLRFDFLDPFFLSITVFPFLIPI---LEVLNICVFPREVTNFLRKSVKRMKESRLEDT 243
Query: 261 G----DLVDVLLRDQENGNLQFPMTIKTIKAV---IFEIFAAGTDSSAIAIDRALSEIIK 313
D + +++ Q + + + ++ V I IFA G ++++ + + E+
Sbjct: 244 QKHRVDFLQLMIDSQNSKETESHKALSDLELVAQSIIFIFA-GYETTSSVLSFIMYELAT 302
Query: 314 NPRVPKRVQGEVREVFNRKGKVDETGIEELQFLKLVIKETLKLHP--------------- 358
+P V +++Q E+ V K + ++++L +V+ ETL+L P
Sbjct: 303 HPDVQQKLQEEIDAVLPNKAPPTYDTVLQMEYLDMVVNETLRLFPIAMRLERVCKKDVEI 362
Query: 359 -----PGSL-----------DPKYWTEPESFILERFPDSSINFQVNNFEYIAFGSVP 399
P + DPKYWTEPE F+ ERF + + ++ + Y FGS P
Sbjct: 363 NGMFIPKGVVVMIPSYALHRDPKYWTEPEKFLPERFSKKNKD-NIDPYIYTPFGSGP 418
>pdb|1W0E|A Chain A, Crystal Structure Of Human Cytochrome P450 3a4
pdb|1W0F|A Chain A, Crystal Structure Of Human Cytochrome P450 3a4
pdb|1W0G|A Chain A, Crystal Structure Of Human Cytochrome P450 3a4
pdb|2J0D|A Chain A, Crystal Structure Of Human P450 3a4 In Complex With
Erythromycin
pdb|2J0D|B Chain B, Crystal Structure Of Human P450 3a4 In Complex With
Erythromycin
pdb|2V0M|A Chain A, Crystal Structure Of Human P450 3a4 In Complex With
Ketoconazole
pdb|2V0M|B Chain B, Crystal Structure Of Human P450 3a4 In Complex With
Ketoconazole
pdb|2V0M|C Chain C, Crystal Structure Of Human P450 3a4 In Complex With
Ketoconazole
pdb|2V0M|D Chain D, Crystal Structure Of Human P450 3a4 In Complex With
Ketoconazole
pdb|3NXU|A Chain A, Crystal Structure Of Human Cytochrome P4503a4 Bound To An
Inhibitor Ritonavir
pdb|3NXU|B Chain B, Crystal Structure Of Human Cytochrome P4503a4 Bound To An
Inhibitor Ritonavir
Length = 485
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 89/417 (21%), Positives = 168/417 (40%), Gaps = 82/417 (19%)
Query: 49 PGPWKLPIIGNLHHLVGSLPHHRLRNLAN-----NYGPIMYLQIGEHPTILVSSPQSAKG 103
PGP LP +GN+ L +H+ + + YG + G+ P + ++ P K
Sbjct: 17 PGPTPLPFLGNI------LSYHKGFCMFDMECHKKYGKVWGFYDGQQPVLAITDPDMIKT 70
Query: 104 VM-QTHDEFFATRVETVATKIMTYDFSAVSFAPYGEQWIELRKLCTMELSSKKRDQSFRY 162
V+ + F R M SA+S A E+W LR L + +S K +
Sbjct: 71 VLVKECYSVFTNRRPFGPVGFMK---SAISIAE-DEEWKRLRSLLSPTFTSGKLKEMVPI 126
Query: 163 DREEEVSEVIRSIASKA--GSVTNLSDIVSSLAYNLFLKIAFLAAAGS----------NT 210
+ ++R++ +A G L D+ + + ++ +F S NT
Sbjct: 127 IAQYG-DVLVRNLRREAETGKPVTLKDVFGAYSMDVITSTSFGVNIDSLNNPQDPFVENT 185
Query: 211 ADL---------FPSIKFLQLIAGVKSQVEKIHQQA-DKIISNIIEERETRLKTGKSEED 260
L F SI + + +E ++ + ++N + + R+K + E+
Sbjct: 186 KKLLRFDFLDPFFLSITVFPFLIPI---LEVLNICVFPREVTNFLRKSVKRMKESRLEDT 242
Query: 261 G----DLVDVLLRDQENGNLQFPMTIKTIKAV---IFEIFAAGTDSSAIAIDRALSEIIK 313
D + +++ Q + + + ++ V I IFA G ++++ + + E+
Sbjct: 243 QKHRVDFLQLMIDSQNSKETESHKALSDLELVAQSIIFIFA-GYETTSSVLSFIMYELAT 301
Query: 314 NPRVPKRVQGEVREVFNRKGKVDETGIEELQFLKLVIKETLKLHP--------------- 358
+P V +++Q E+ V K + ++++L +V+ ETL+L P
Sbjct: 302 HPDVQQKLQEEIDAVLPNKAPPTYDTVLQMEYLDMVVNETLRLFPIAMRLERVCKKDVEI 361
Query: 359 -----PGSL-----------DPKYWTEPESFILERFPDSSINFQVNNFEYIAFGSVP 399
P + DPKYWTEPE F+ ERF + + ++ + Y FGS P
Sbjct: 362 NGMFIPKGVVVMIPSYALHRDPKYWTEPEKFLPERFSKKNKD-NIDPYIYTPFGSGP 417
>pdb|3PM0|A Chain A, Structural Characterization Of The Complex Between Alpha-
Naphthoflavone And Human Cytochrome P450 1b1 (Cyp1b1)
Length = 507
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 71/326 (21%), Positives = 134/326 (41%), Gaps = 52/326 (15%)
Query: 48 PPGPWKLPIIGNLHHLVGSLPHHRLRNLANNYGPIMYLQIGEHPTILVSSPQSAKGVMQT 107
PPGP+ P+IGN VG H LA YG + +++G P ++++ ++ +
Sbjct: 11 PPGPFAWPLIGNA-AAVGQAAHLSFARLARRYGDVFQIRLGSCPIVVLNGERAIHQALVQ 69
Query: 108 HDEFFATRVETVATKIMTYDFSAVSFAPYGEQW-IELRKLCTMELSSKKRDQSFRY---- 162
FA R + ++++ S ++F Y E W ++ R +M + R R
Sbjct: 70 QGSAFADRPSFASFRVVSGGRS-MAFGHYSEHWKVQRRAAHSMMRNFFTRQPRSRQVLEG 128
Query: 163 ----DREEEVSEVIRSIASKAG------SVTNLSDIVSSLAYNLFL-------------- 198
+ E V+ ++R A A +V +++++S++ +
Sbjct: 129 HVLSEARELVALLVRGSADGAFLDPRPLTVVAVANVMSAVCFGCRYSHDDPEFRELLSHN 188
Query: 199 -KIAFLAAAGSNTADLFPSIKFLQLIAGVKSQVEKIHQQADKIISNIIEERETR----LK 253
+ AGS D+ P +LQ V + +Q ++ SN I ++ R L+
Sbjct: 189 EEFGRTVGAGS-LVDVMP---WLQYFPNPVRTVFREFEQLNRNFSNFILDKFLRHCESLR 244
Query: 254 TGKSEEDGDLVDVLL--------RDQENGNLQFPMTIKTIKAVIFEIFAAGTDSSAIAID 305
G + D++D + D G + + ++ + A I +IF A D+ + A+
Sbjct: 245 PGAAPR--DMMDAFILSAEKKAAGDSHGGGAR--LDLENVPATITDIFGASQDTLSTALQ 300
Query: 306 RALSEIIKNPRVPKRVQGEVREVFNR 331
L + P V RVQ E+ +V R
Sbjct: 301 WLLLLFTRYPDVQTRVQAELDQVVGR 326
>pdb|2F9Q|A Chain A, Crystal Structure Of Human Cytochrome P450 2d6
pdb|2F9Q|B Chain B, Crystal Structure Of Human Cytochrome P450 2d6
pdb|2F9Q|C Chain C, Crystal Structure Of Human Cytochrome P450 2d6
pdb|2F9Q|D Chain D, Crystal Structure Of Human Cytochrome P450 2d6
Length = 479
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 88/422 (20%), Positives = 161/422 (38%), Gaps = 86/422 (20%)
Query: 74 NLANNYGPIMYLQIGEHPTILVSSPQSAKGVMQTHDEFFATRVETVATKIMTYD--FSAV 131
L +G + LQ+ P ++++ + + + TH E A R T+I+ + V
Sbjct: 38 QLRRRFGDVFSLQLAWTPVVVLNGLAAVREALVTHGEDTADRPPVPITQILGFGPRSQGV 97
Query: 132 SFAPYGEQWIELRK-----LCTMELSSKKRDQSFRYDREEEVSEVIRSIASKAGSV---- 182
A YG W E R+ L + L K +Q EE + + + A+ +G
Sbjct: 98 FLARYGPAWREQRRFSVSTLRNLGLGKKSLEQWV----TEEAACLCAAFANHSGRPFRPN 153
Query: 183 ----TNLSDIVSSLAYN--------LFLKIAFLAAAGSNTADLF--------PSIKFLQL 222
+S++++SL FL++ LA G F P + +
Sbjct: 154 GLLDKAVSNVIASLTCGRRFEYDDPRFLRLLDLAQEGLKEESGFLREVLNAVPVDRHIPA 213
Query: 223 IAGVKSQVEKIH-QQADKIISNIIEERETRLKTGKSEEDGDLVDVLLRDQE--NGNLQFP 279
+AG + +K Q D++++ E R+ ++ DL + L + E GN +
Sbjct: 214 LAGKVLRFQKAFLTQLDELLT------EHRMTWDPAQPPRDLTEAFLAEMEKAKGNPESS 267
Query: 280 MTIKTIKAVIFEIFAAGTDSSAIAIDRALSEIIKNPRVPKRVQGEVREVFNRKGKVDETG 339
+ ++ V+ ++F+AG +++ + L +I +P V +RVQ E+ +V + + +
Sbjct: 268 FNDENLRIVVADLFSAGMVTTSTTLAWGLLLMILHPDVQRRVQQEIDDVIGQVRRPEMGD 327
Query: 340 IEELQFLKLVIKETLKLH----------------------PPGSL----------DPKYW 367
+ + VI E + P G+ D W
Sbjct: 328 QAHMPYTTAVIHEVQRFGDIVPLGMTHMTSRDIEVQGFRIPKGTTLITNLSSVLKDEAVW 387
Query: 368 TEPESFILERFPDSSINF-QVNNFEYIAFGSVPILRFPLAM---------LLYHFDWKLP 417
+P F E F D+ +F + F + G L PLA LL HF + +P
Sbjct: 388 EKPFRFHPEHFLDAQGHFVKPEAFLPFSAGRRACLGEPLARMELFLFFTSLLQHFSFSVP 447
Query: 418 NG 419
G
Sbjct: 448 TG 449
>pdb|3QM4|A Chain A, Human Cytochrome P450 (Cyp) 2d6 - Prinomastat Complex
pdb|3QM4|B Chain B, Human Cytochrome P450 (Cyp) 2d6 - Prinomastat Complex
pdb|3TBG|A Chain A, Human Cytochrome P450 2d6 With Two Thioridazines Bound In
Active Site
pdb|3TBG|B Chain B, Human Cytochrome P450 2d6 With Two Thioridazines Bound In
Active Site
pdb|3TBG|C Chain C, Human Cytochrome P450 2d6 With Two Thioridazines Bound In
Active Site
pdb|3TBG|D Chain D, Human Cytochrome P450 2d6 With Two Thioridazines Bound In
Active Site
pdb|3TDA|A Chain A, Competitive Replacement Of Thioridazine By Prinomastat In
Crystals Of Cytochrome P450 2d6
pdb|3TDA|B Chain B, Competitive Replacement Of Thioridazine By Prinomastat In
Crystals Of Cytochrome P450 2d6
pdb|3TDA|C Chain C, Competitive Replacement Of Thioridazine By Prinomastat In
Crystals Of Cytochrome P450 2d6
pdb|3TDA|D Chain D, Competitive Replacement Of Thioridazine By Prinomastat In
Crystals Of Cytochrome P450 2d6
Length = 479
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 88/422 (20%), Positives = 161/422 (38%), Gaps = 86/422 (20%)
Query: 74 NLANNYGPIMYLQIGEHPTILVSSPQSAKGVMQTHDEFFATRVETVATKIMTYD--FSAV 131
L +G + LQ+ P ++++ + + + TH E A R T+I+ + V
Sbjct: 38 QLRRRFGDVFSLQLAWTPVVVLNGLAAVREALVTHGEDTADRPPVPITQILGFGPRSQGV 97
Query: 132 SFAPYGEQWIELRK-----LCTMELSSKKRDQSFRYDREEEVSEVIRSIASKAGSV---- 182
A YG W E R+ L + L K +Q EE + + + A+ +G
Sbjct: 98 FLARYGPAWREQRRFSVSTLRNLGLGKKSLEQWV----TEEAACLCAAFANHSGRPFRPN 153
Query: 183 ----TNLSDIVSSLAYN--------LFLKIAFLAAAGSNTADLF--------PSIKFLQL 222
+S++++SL FL++ LA G F P + +
Sbjct: 154 GLLDKAVSNVIASLTCGRRFEYDDPRFLRLLDLAQEGLKEESGFLREVLNAVPVLLHIPA 213
Query: 223 IAGVKSQVEKIH-QQADKIISNIIEERETRLKTGKSEEDGDLVDVLLRDQE--NGNLQFP 279
+AG + +K Q D++++ E R+ ++ DL + L + E GN +
Sbjct: 214 LAGKVLRFQKAFLTQLDELLT------EHRMTWDPAQPPRDLTEAFLAEMEKAKGNPESS 267
Query: 280 MTIKTIKAVIFEIFAAGTDSSAIAIDRALSEIIKNPRVPKRVQGEVREVFNRKGKVDETG 339
+ ++ V+ ++F+AG +++ + L +I +P V +RVQ E+ +V + + +
Sbjct: 268 FNDENLRIVVADLFSAGMVTTSTTLAWGLLLMILHPDVQRRVQQEIDDVIGQVRRPEMGD 327
Query: 340 IEELQFLKLVIKETLKLH----------------------PPGSL----------DPKYW 367
+ + VI E + P G+ D W
Sbjct: 328 QAHMPYTTAVIHEVQRFGDIVPLGVTHMTSRDIEVQGFRIPKGTTLITNLSSVLKDEAVW 387
Query: 368 TEPESFILERFPDSSINF-QVNNFEYIAFGSVPILRFPLAM---------LLYHFDWKLP 417
+P F E F D+ +F + F + G L PLA LL HF + +P
Sbjct: 388 EKPFRFHPEHFLDAQGHFVKPEAFLPFSAGRRACLGEPLARMELFLFFTSLLQHFSFSVP 447
Query: 418 NG 419
G
Sbjct: 448 TG 449
>pdb|3CZH|A Chain A, Crystal Structure Of Cyp2r1 In Complex With Vitamin D2
pdb|3CZH|B Chain B, Crystal Structure Of Cyp2r1 In Complex With Vitamin D2
Length = 481
Score = 51.6 bits (122), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 88/389 (22%), Positives = 146/389 (37%), Gaps = 69/389 (17%)
Query: 59 NLHHLVGS--LPHHRLRNLANNYGPIMYLQIGEHPTILVSSPQSAKGVMQTHDEFFATRV 116
N++ L S LPH +R + YG I L +G T++++ K + E FA R
Sbjct: 25 NIYSLAASSELPHVYMRKQSQVYGEIFSLDLGGISTVVLNGYDVVKECLVHQSEIFADRP 84
Query: 117 ETVATKIMTYDFSAVSFAPYGEQWIELRKLCTMELSSKKRDQ-SFRYDREEEVSEVIRSI 175
MT + + YG W++ R+L Q SF EE +I
Sbjct: 85 CLPLFMKMT-KMGGLLNSRYGRGWVDHRRLAVNSFRYFGYGQKSFESKILEETKFFNDAI 143
Query: 176 ASKAG-----------SVTNLSDIV---SSLAY---------NLFLKIAFLAAAGSN-TA 211
+ G +V+N+++++ Y LF + LAA+ S
Sbjct: 144 ETYKGRPFDFKQLITNAVSNITNLIIFGERFTYEDTDFQHMIELFSENVELAASASVFLY 203
Query: 212 DLFPSIKFLQLIAGVKSQVEKIHQQADKIISNIIEERETRLKTGKSEEDGDLVDVLLRDQ 271
+ FP I L G Q+ + +S +IE+ K + VD L +
Sbjct: 204 NAFPWIGILPF--GKHQQLFRNAAVVYDFLSRLIEKASVNRKPQLPQH---FVDAYLDEM 258
Query: 272 ENGNLQFPMTIKTIKAVIF---EIFAAGTDSSAIAIDRALSEIIKNPRVPKRVQGEVREV 328
+ G P + + + +IF E+ AGT+++ + A+ + P + +VQ E+ +
Sbjct: 259 DQGKND-PSSTFSKENLIFSVGELIIAGTETTTNVLRWAILFMALYPNIQGQVQKEIDLI 317
Query: 329 FNRKGKVDETGIEELQFLKLVIKETLKLH----------------------PPGS----- 361
GK ++ + + V+ E L+ P G+
Sbjct: 318 MGPNGKPSWDDKCKMPYTEAVLHEVLRFCNIVPLGIFHATSEDAVVRGYSIPKGTTVITN 377
Query: 362 -----LDPKYWTEPESFILERFPDSSINF 385
D KYW +PE F ERF DSS F
Sbjct: 378 LYSVHFDEKYWRDPEVFHPERFLDSSGYF 406
>pdb|3QZ1|A Chain A, Crystal Structure Of Bovine Steroid Of 21-Hydroxylase
(P450c21)
pdb|3QZ1|B Chain B, Crystal Structure Of Bovine Steroid Of 21-Hydroxylase
(P450c21)
pdb|3QZ1|C Chain C, Crystal Structure Of Bovine Steroid Of 21-Hydroxylase
(P450c21)
pdb|3QZ1|D Chain D, Crystal Structure Of Bovine Steroid Of 21-Hydroxylase
(P450c21)
Length = 496
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 78/380 (20%), Positives = 153/380 (40%), Gaps = 47/380 (12%)
Query: 33 GPWRLKANIERSLSLPPGPWKLPIIGNLHHLVGSLPHHRLRNLANNYGPIMYLQIGEHPT 92
G W+L R+L LPP + G LH L +LP H L +L GP+ L++G
Sbjct: 21 GRWKL-----RNLHLPPL-----VPGFLHLLQPNLPIHLL-SLTQKLGPVYRLRLGLQEV 69
Query: 93 ILVSSPQSAKGVMQTHDEFFATRVETVATKIMTYDFSAVSFAPYGEQWIELRKLCTMELS 152
++++S ++ + M FA R + + K+++ +S Y W +KL L
Sbjct: 70 VVLNSKRTIEEAMIRKWVDFAGRPQIPSYKLVSQRCQDISLGDYSLLWKAHKKLTRSALL 129
Query: 153 SKKRDQSFRYDREEEVSEVIRSIASKAGSVTNLSDIVSSLAYNLFLKIAF-------LAA 205
R S ++ E + +AG+ + S L ++ + F + A
Sbjct: 130 LGTRS-SMEPWVDQLTQEFCERMRVQAGAPVTIQKEFSLLTCSIICYLTFGNKEDTLVHA 188
Query: 206 AGSNTADLFP-----SIKFLQLIAGVK-------SQVEKIHQQADKIISNIIEERETRLK 253
DL SI+ L ++ ++ ++++ + D ++ + + +
Sbjct: 189 FHDCVQDLMKTWDHWSIQILDMVPFLRFFPNPGLWRLKQAIENRDHMVEKQLRRHKESMV 248
Query: 254 TGKSEEDGDLVDVLLRD-----QENGNLQFPMTIKTIKAVIFEIFAAGTDSSAIAIDRAL 308
G+ D+ D +L+ E G Q + + + ++F GT+++A + A+
Sbjct: 249 AGQWR---DMTDYMLQGVGRQRVEEGPGQ--LLEGHVHMSVVDLFIGGTETTASTLSWAV 303
Query: 309 SEIIKNPRVPKRVQGEVREVFNRKGKVDETGIEE---LQFLKLVIKETLKLHP--PGSLD 363
+ ++ +P + +R+Q E+ ++ L L I E L+L P P +L
Sbjct: 304 AFLLHHPEIQRRLQEELDRELGPGASCSRVTYKDRARLPLLNATIAEVLRLRPVVPLAL- 362
Query: 364 PKYWTEPESFILERFPDSSI 383
P T P S P+ +
Sbjct: 363 PHRTTRPSSIFGYDIPEGMV 382
>pdb|3C6G|A Chain A, Crystal Structure Of Cyp2r1 In Complex With Vitamin D3
pdb|3C6G|B Chain B, Crystal Structure Of Cyp2r1 In Complex With Vitamin D3
pdb|3DL9|A Chain A, Crystal Structure Of Cyp2r1 In Complex With
1-Alpha-Hydroxy- Vitamin D2
pdb|3DL9|B Chain B, Crystal Structure Of Cyp2r1 In Complex With
1-Alpha-Hydroxy- Vitamin D2
Length = 479
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 88/389 (22%), Positives = 146/389 (37%), Gaps = 69/389 (17%)
Query: 59 NLHHLVGS--LPHHRLRNLANNYGPIMYLQIGEHPTILVSSPQSAKGVMQTHDEFFATRV 116
N++ L S LPH +R + YG I L +G T++++ K + E FA R
Sbjct: 25 NIYSLAASSELPHVYMRKQSQVYGEIFSLDLGGISTVVLNGYDVVKECLVHQSEIFADRP 84
Query: 117 ETVATKIMTYDFSAVSFAPYGEQWIELRKLCTMELSSKKRDQ-SFRYDREEEVSEVIRSI 175
MT + + YG W++ R+L Q SF EE +I
Sbjct: 85 CLPLFMKMT-KMGGLLNSRYGRGWVDHRRLAVNSFRYFGYGQKSFESKILEETKFFNDAI 143
Query: 176 ASKAG-----------SVTNLSDIV---SSLAY---------NLFLKIAFLAAAGSN-TA 211
+ G +V+N+++++ Y LF + LAA+ S
Sbjct: 144 ETYKGRPFDFKQLITNAVSNITNLIIFGERFTYEDTDFQHMIELFSENVELAASASVFLY 203
Query: 212 DLFPSIKFLQLIAGVKSQVEKIHQQADKIISNIIEERETRLKTGKSEEDGDLVDVLLRDQ 271
+ FP I L G Q+ + +S +IE+ K + VD L +
Sbjct: 204 NAFPWIGILPF--GKHQQLFRNAAVVYDFLSRLIEKASVNRKPQLPQH---FVDAYLDEM 258
Query: 272 ENGNLQFPMTIKTIKAVIF---EIFAAGTDSSAIAIDRALSEIIKNPRVPKRVQGEVREV 328
+ G P + + + +IF E+ AGT+++ + A+ + P + +VQ E+ +
Sbjct: 259 DQGKND-PSSTFSKENLIFSVGELIIAGTETTTNVLRWAILFMALYPNIQGQVQKEIDLI 317
Query: 329 FNRKGKVDETGIEELQFLKLVIKETLKLH----------------------PPGS----- 361
GK ++ + + V+ E L+ P G+
Sbjct: 318 MGPNGKPSWDDKCKMPYTEAVLHEVLRFCNIVPLGIFHATSEDAVVRGYSIPKGTTVITN 377
Query: 362 -----LDPKYWTEPESFILERFPDSSINF 385
D KYW +PE F ERF DSS F
Sbjct: 378 LYSVHFDEKYWRDPEVFHPERFLDSSGYF 406
>pdb|3IBD|A Chain A, Crystal Structure Of A Cytochrome P450 2b6 Genetic Variant
In Complex With The Inhibitor
4-(4-Chlorophenyl)imidazole
pdb|3QOA|A Chain A, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-Benzylpyridine.
pdb|3QU8|A Chain A, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3QU8|B Chain B, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3QU8|C Chain C, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3QU8|D Chain D, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3QU8|E Chain E, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3QU8|F Chain F, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3UA5|A Chain A, Crystal Structure Of P450 2b6 (Y226hK262R) IN COMPLEX WITH
TWO Molecules Of Amlodipine
pdb|3UA5|B Chain B, Crystal Structure Of P450 2b6 (Y226hK262R) IN COMPLEX WITH
TWO Molecules Of Amlodipine
Length = 476
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 55/280 (19%), Positives = 110/280 (39%), Gaps = 38/280 (13%)
Query: 78 NYGPIMYLQIGEHPTILVSSPQSAKGVMQTHDEFFATRVETVATKIMTYDFSAVSFAPYG 137
YG + + +G P +++ ++ + + E F+ R + + + FA G
Sbjct: 42 KYGDVFTVHLGPRPVVMLCGVEAIREALVDKAEAFSGRGKIAMVDPFFRGYGVI-FAN-G 99
Query: 138 EQWIELRK--LCTM-ELSSKKRDQSFRYDREEEVSEVIRSIASKAGSVTNLSDIVSSLAY 194
+W LR+ + TM + KR R +EE +I + G++ + + + S+
Sbjct: 100 NRWKVLRRFSVTTMRDFGMGKRSVEERI--QEEAQCLIEELRKSKGALMDPTFLFQSITA 157
Query: 195 NLFLKIAF------------------------LAAAGSNTADLFPSIKFLQLIAGVKSQV 230
N+ I F +++ +LF FL+ G QV
Sbjct: 158 NIICSIVFGKRFHYQDQEFLKMLNLFYQTFSLISSVFGQLFELFSG--FLKHFPGAHRQV 215
Query: 231 EKIHQQADKIISNIIEERETRLKTGKSEEDGDLVDVLL--RDQENGNLQFPMTIKTIKAV 288
K Q+ + I + +E+ L DL+D L ++E N + + +
Sbjct: 216 YKNLQEINAYIGHSVEKHRETLDPSAPR---DLIDTYLLHMEKEKSNAHSEFSHQNLNLN 272
Query: 289 IFEIFAAGTDSSAIAIDRALSEIIKNPRVPKRVQGEVREV 328
+F AGT++++ + ++K P V +RV E+ +V
Sbjct: 273 TLSLFFAGTETTSTTLRYGFLLMLKYPHVAERVYREIEQV 312
>pdb|3NA0|A Chain A, Crystal Structure Of Human Cyp11a1 In Complex With 20,22-
Dihydroxycholesterol
pdb|3NA0|B Chain B, Crystal Structure Of Human Cyp11a1 In Complex With 20,22-
Dihydroxycholesterol
Length = 471
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 45/79 (56%)
Query: 280 MTIKTIKAVIFEIFAAGTDSSAIAIDRALSEIIKNPRVPKRVQGEVREVFNRKGKVDETG 339
M+ + IKA + E+ A G D++++ + L E+ +N +V ++ EV ++ T
Sbjct: 268 MSFEDIKANVTEMLAGGVDTTSMTLQWHLYEMARNLKVQDMLRAEVLAARHQAQGDMATM 327
Query: 340 IEELQFLKLVIKETLKLHP 358
++ + LK IKETL+LHP
Sbjct: 328 LQLVPLLKASIKETLRLHP 346
>pdb|3N9Y|A Chain A, Crystal Structure Of Human Cyp11a1 In Complex With
Cholesterol
pdb|3N9Y|B Chain B, Crystal Structure Of Human Cyp11a1 In Complex With
Cholesterol
pdb|3N9Z|A Chain A, Crystal Structure Of Human Cyp11a1 In Complex With 22-
Hydroxycholesterol
pdb|3N9Z|B Chain B, Crystal Structure Of Human Cyp11a1 In Complex With 22-
Hydroxycholesterol
pdb|3NA1|A Chain A, Crystal Structure Of Human Cyp11a1 In Complex With 20-
Hydroxycholesterol
pdb|3NA1|B Chain B, Crystal Structure Of Human Cyp11a1 In Complex With 20-
Hydroxycholesterol
Length = 487
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 45/79 (56%)
Query: 280 MTIKTIKAVIFEIFAAGTDSSAIAIDRALSEIIKNPRVPKRVQGEVREVFNRKGKVDETG 339
M+ + IKA + E+ A G D++++ + L E+ +N +V ++ EV ++ T
Sbjct: 271 MSFEDIKANVTEMLAGGVDTTSMTLQWHLYEMARNLKVQDMLRAEVLAARHQAQGDMATM 330
Query: 340 IEELQFLKLVIKETLKLHP 358
++ + LK IKETL+LHP
Sbjct: 331 LQLVPLLKASIKETLRLHP 349
>pdb|4DVQ|A Chain A, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|B Chain B, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|C Chain C, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|D Chain D, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|E Chain E, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|F Chain F, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|G Chain G, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|H Chain H, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|I Chain I, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|J Chain J, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|K Chain K, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|L Chain L, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4FDH|A Chain A, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|B Chain B, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|C Chain C, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|D Chain D, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|E Chain E, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|F Chain F, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|G Chain G, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|H Chain H, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|I Chain I, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|J Chain J, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|K Chain K, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|L Chain L, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
Length = 483
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 34/130 (26%), Positives = 58/130 (44%), Gaps = 11/130 (8%)
Query: 231 EKIHQQADKIISNIIEERETRLKTGKSEEDGDLVDVLLRDQENGNLQFPMTIKTIKAVIF 290
+ I Q D I I +E L + + +V LL E ++++ IKA
Sbjct: 235 DCIFQYGDNCIQKIYQE----LAFNRPQHYTGIVAELLLKAE-------LSLEAIKANSM 283
Query: 291 EIFAAGTDSSAIAIDRALSEIIKNPRVPKRVQGEVREVFNRKGKVDETGIEELQFLKLVI 350
E+ A D++A + L E+ +NP V + ++ E + + EL L+ +
Sbjct: 284 ELTAGSVDTTAFPLLMTLFELARNPDVQQILRQESLAAAASISEHPQKATTELPLLRAAL 343
Query: 351 KETLKLHPPG 360
KETL+L+P G
Sbjct: 344 KETLRLYPVG 353
>pdb|3MZS|A Chain A, Crystal Structure Of Cytochrome P450 Cyp11a1 In Complex
With 22- Hydroxy-Cholesterol
pdb|3MZS|B Chain B, Crystal Structure Of Cytochrome P450 Cyp11a1 In Complex
With 22- Hydroxy-Cholesterol
pdb|3MZS|C Chain C, Crystal Structure Of Cytochrome P450 Cyp11a1 In Complex
With 22- Hydroxy-Cholesterol
pdb|3MZS|D Chain D, Crystal Structure Of Cytochrome P450 Cyp11a1 In Complex
With 22- Hydroxy-Cholesterol
Length = 486
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/108 (27%), Positives = 57/108 (52%), Gaps = 14/108 (12%)
Query: 280 MTIKTIKAVIFEIFAAGTDSSAIAIDRALSEIIKNPRVPKRVQGEVREVFNRKGKVDETG 339
M ++ +KA I E+ A G +++++ + L E+ ++ V + ++ EV R+ + D +
Sbjct: 272 MLLEDVKANITEMLAGGVNTTSMTLQWHLYEMARSLNVQEMLREEVLNA-RRQAEGDISK 330
Query: 340 -IEELQFLKLVIKETLKLHPPGSLDPKYWTEPESFILERFPDSSINFQ 386
++ + LK IKETL+LHP S L+R+P+S + Q
Sbjct: 331 MLQMVPLLKASIKETLRLHPI------------SVTLQRYPESDLVLQ 366
>pdb|1EA1|A Chain A, Cytochrome P450 14 Alpha-Sterol Demethylase (Cyp51) From
Mycobacterium Tuberculosis In Complex With Fluconazole
pdb|1E9X|A Chain A, Cytochrome P450 14 Alpha-Sterol Demethylase (Cyp51) From
Mycobacterium Tuberculosis In Complex With 4-
Phenylimidazole
pdb|1H5Z|A Chain A, Cytochrome P450 14 Alpha-Sterol Demethylase (Cyp51) From
Mycobacterium Tuberculosis In Ferric Low-Spin State
Length = 455
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/121 (27%), Positives = 60/121 (49%), Gaps = 5/121 (4%)
Query: 240 IISNIIEERETRLKTGKSEEDGDLVDVLLR-DQENGNLQFPMTIKTIKAVIFEIFAAGTD 298
++++I+ R T KS D D++DVL+ E G +F + I + + AG
Sbjct: 204 LVADIMNGRIANPPTDKS--DRDMLDVLIAVKAETGTPRF--SADEITGMFISMMFAGHH 259
Query: 299 SSAIAIDRALSEIIKNPRVPKRVQGEVREVFNRKGKVDETGIEELQFLKLVIKETLKLHP 358
+S+ L E++++ V E+ E++ V + ++ L+ V+KETL+LHP
Sbjct: 260 TSSGTASWTLIELMRHRDAYAAVIDELDELYGDGRSVSFHALRQIPQLENVLKETLRLHP 319
Query: 359 P 359
P
Sbjct: 320 P 320
>pdb|2W0A|A Chain A, Cyp51 Of M. Tuberculosis Bound To An Inhibitor
N-[(1s)-2-Methyl-1-(Pyridin-4-Ylcarbamoyl)propyl]
Cyclohexanecarboxamide
Length = 455
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/121 (27%), Positives = 60/121 (49%), Gaps = 5/121 (4%)
Query: 240 IISNIIEERETRLKTGKSEEDGDLVDVLLR-DQENGNLQFPMTIKTIKAVIFEIFAAGTD 298
++++I+ R T KS D D++DVL+ E G +F + I + + AG
Sbjct: 204 LVADIMNGRIANPPTDKS--DRDMLDVLIAVKAETGTPRF--SADEITGMFISMMFAGHH 259
Query: 299 SSAIAIDRALSEIIKNPRVPKRVQGEVREVFNRKGKVDETGIEELQFLKLVIKETLKLHP 358
+S+ L E++++ V E+ E++ V + ++ L+ V+KETL+LHP
Sbjct: 260 TSSGTASWTLIELMRHRDAYAAVIDELDELYGDGRSVSFHALRQIPQLENVLKETLRLHP 319
Query: 359 P 359
P
Sbjct: 320 P 320
>pdb|1X8V|A Chain A, Estriol-Bound And Ligand-Free Structures Of Sterol
14alpha- Demethylase (Cyp51)
pdb|2BZ9|A Chain A, Ligand-Free Structure Of Sterol 14alpha-Demethylase From
Mycobacterium Tuberculosis In P2(1) Space Group
pdb|2BZ9|B Chain B, Ligand-Free Structure Of Sterol 14alpha-Demethylase From
Mycobacterium Tuberculosis In P2(1) Space Group
pdb|2CI0|A Chain A, High Throughput Screening And X-Ray Crystallography
Assisted Evaluation Of Small Molecule Scaffolds For
Cyp51 Inhibitors
pdb|2CIB|A Chain A, High Throughput Screening And X-Ray Crystallography
Assisted Evaluation Of Small Molecule Scaffolds For
Cyp51 Inhibitors
pdb|2VKU|A Chain A, 4,4'-Dihydroxybenzophenone Mimics Sterol Substrate In The
Binding Site Of Sterol 14alpha-Demethylase (Cyp51) In
The X-Ray Structure Of The Complex
pdb|2W09|A Chain A, Cyp51 Of M. Tuberculosis Bound To An Inhibitor Cis-4-
Methyl-N-[(1s)-3-(Methylsulfanyl)-1-(Pyridin-4-
Ylcarbamoyl)propyl]cyclohexanecarboxamide
pdb|2W0B|A Chain A, Cyp51 Of M. Tuberculosis Bound To An Inhibitor 3-{[(4-
Methylphenyl)sulfonyl]amino}propyl Pyridin-4-Ylcarbamate
Length = 455
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/121 (27%), Positives = 60/121 (49%), Gaps = 5/121 (4%)
Query: 240 IISNIIEERETRLKTGKSEEDGDLVDVLLR-DQENGNLQFPMTIKTIKAVIFEIFAAGTD 298
++++I+ R T KS D D++DVL+ E G +F + I + + AG
Sbjct: 204 LVADIMNGRIANPPTDKS--DRDMLDVLIAVKAETGTPRF--SADEITGMFISMMFAGHH 259
Query: 299 SSAIAIDRALSEIIKNPRVPKRVQGEVREVFNRKGKVDETGIEELQFLKLVIKETLKLHP 358
+S+ L E++++ V E+ E++ V + ++ L+ V+KETL+LHP
Sbjct: 260 TSSGTASWTLIELMRHRDAYAAVIDELDELYGDGRSVSFHALRQIPQLENVLKETLRLHP 319
Query: 359 P 359
P
Sbjct: 320 P 320
>pdb|1U13|A Chain A, Crystal Structure Analysis Of The C37lC151TC442A-Triple
Mutant Of Cyp51 From Mycobacterium Tuberculosis
Length = 455
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/121 (27%), Positives = 60/121 (49%), Gaps = 5/121 (4%)
Query: 240 IISNIIEERETRLKTGKSEEDGDLVDVLLR-DQENGNLQFPMTIKTIKAVIFEIFAAGTD 298
++++I+ R T KS D D++DVL+ E G +F + I + + AG
Sbjct: 204 LVADIMNGRIANPPTDKS--DRDMLDVLIAVKAETGTPRF--SADEITGMFISMMFAGHH 259
Query: 299 SSAIAIDRALSEIIKNPRVPKRVQGEVREVFNRKGKVDETGIEELQFLKLVIKETLKLHP 358
+S+ L E++++ V E+ E++ V + ++ L+ V+KETL+LHP
Sbjct: 260 TSSGTASWTLIELMRHRDAYAAVIDELDELYGDGRSVSFHALRQIPQLENVLKETLRLHP 319
Query: 359 P 359
P
Sbjct: 320 P 320
>pdb|4DUA|A Chain A, Cytochrome P450 Bm3h-9d7 Mri Sensor, No Ligand
pdb|4DUA|B Chain B, Cytochrome P450 Bm3h-9d7 Mri Sensor, No Ligand
Length = 471
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 35/140 (25%), Positives = 68/140 (48%), Gaps = 19/140 (13%)
Query: 227 KSQVEKIHQQADKIISNIIEERETRLKTGKSEEDGDLVDVLL--RDQENGNLQFPMTIKT 284
K Q ++ + + ++ II +R+ E+ DL+ +L +D E G P+ +
Sbjct: 202 KRQFQEDIKVMNDLVDKIIADRK-----ASGEQSDDLLTHMLNGKDPETGE---PLDDEN 253
Query: 285 IKAVIFEIFAAGTDSSAIAIDRALSEIIKNPRVPKRVQGEVREVFNRKGKVDET----GI 340
I+ I AAG ++++ + AL ++KNP V ++ E V VD +
Sbjct: 254 IRYQIITFLAAGHEATSGLLSFALYFLVKNPHVLQKAAEEAARVL-----VDPVPSYKQV 308
Query: 341 EELQFLKLVIKETLKLHPPG 360
++L+++ +V+ E L+L P G
Sbjct: 309 KQLKYVGMVLNEALRLWPTG 328
>pdb|4DUB|A Chain A, Cytochrome P450 Bm3h-9d7 Mri Sensor Bound To Dopamine
pdb|4DUB|B Chain B, Cytochrome P450 Bm3h-9d7 Mri Sensor Bound To Dopamine
Length = 472
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 35/140 (25%), Positives = 68/140 (48%), Gaps = 19/140 (13%)
Query: 227 KSQVEKIHQQADKIISNIIEERETRLKTGKSEEDGDLVDVLL--RDQENGNLQFPMTIKT 284
K Q ++ + + ++ II +R+ E+ DL+ +L +D E G P+ +
Sbjct: 203 KRQFQEDIKVMNDLVDKIIADRK-----ASGEQSDDLLTHMLNGKDPETGE---PLDDEN 254
Query: 285 IKAVIFEIFAAGTDSSAIAIDRALSEIIKNPRVPKRVQGEVREVFNRKGKVDET----GI 340
I+ I AAG ++++ + AL ++KNP V ++ E V VD +
Sbjct: 255 IRYQIITFLAAGHEATSGLLSFALYFLVKNPHVLQKAAEEAARVL-----VDPVPSYKQV 309
Query: 341 EELQFLKLVIKETLKLHPPG 360
++L+++ +V+ E L+L P G
Sbjct: 310 KQLKYVGMVLNEALRLWPTG 329
>pdb|3K9V|A Chain A, Crystal Structure Of Rat Mitochondrial P450 24a1 S57d In
Complex With Chaps
pdb|3K9V|B Chain B, Crystal Structure Of Rat Mitochondrial P450 24a1 S57d In
Complex With Chaps
pdb|3K9Y|A Chain A, Crystal Structure Of Rat Mitochondrial P450 24a1 S57d In
Complex With Cymal-5
pdb|3K9Y|B Chain B, Crystal Structure Of Rat Mitochondrial P450 24a1 S57d In
Complex With Cymal-5
Length = 482
Score = 38.1 bits (87), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 64/347 (18%), Positives = 133/347 (38%), Gaps = 41/347 (11%)
Query: 43 RSLSLPPGPWKLPIIGNLHHLV--GSLP--HHRLRNLANNYGPIMYLQIGEHPTILVSSP 98
R+++ PGP P++G+L + G L H L YG I +++G ++ + SP
Sbjct: 21 RNVTDLPGPTNWPLLGSLLEIFWKGGLKKQHDTLAEYHKKYGQIFRMKLGSFDSVHLGSP 80
Query: 99 QSAKGVMQTHDEFFATRVETVATKIMTYDFSAVSFAPY---GEQWIELRKLCTMELSSKK 155
+ + +T + R+E K D ++ G++W +R +L
Sbjct: 81 SLLEALYRT-ESAHPQRLEIKPWKAYR-DHRNEAYGLMILEGQEWQRVRSAFQKKLMKPV 138
Query: 156 RDQSFRYDREEEVSEVIRSIASKAGSVTNLSDIVSSLAYNLFLKIAFL----------AA 205
E +++ + + + D+ S L F I +
Sbjct: 139 EIMKLDKKINEVLADFLERMDELCDERGRIPDLYSELNKWSFESICLVLYEKRFGLLQKE 198
Query: 206 AGSNTADLFPSIKFL------------QLIAGVKSQVEKIHQQA-DKIISNIIEERETRL 252
+IK + +L + ++V + H A D I ++ + RL
Sbjct: 199 TEEEALTFITAIKTMMSTFGKMMVTPVELHKRLNTKVWQAHTLAWDTIFKSVKPCIDNRL 258
Query: 253 KTGKSEEDGD-LVDVLLRDQENGNLQFPMTIKTIKAVIFEIFAAGTDSSAIAIDRALSEI 311
+ + D L D+ +D ++ K + A + E+ A +++A ++ L +
Sbjct: 259 QRYSQQPGADFLCDIYQQDH--------LSKKELYAAVTELQLAAVETTANSLMWILYNL 310
Query: 312 IKNPRVPKRVQGEVREVFNRKGKVDETGIEELQFLKLVIKETLKLHP 358
+NP+ +R+ EV+ V + + +LK +KE+++L P
Sbjct: 311 SRNPQAQRRLLQEVQSVLPDNQTPRAEDLRNMPYLKACLKESMRLTP 357
>pdb|4DUC|A Chain A, Cytochrome P450 Bm3h-2g9 Mri Sensor, No Ligand
pdb|4DUC|B Chain B, Cytochrome P450 Bm3h-2g9 Mri Sensor, No Ligand
Length = 472
Score = 36.6 bits (83), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 34/138 (24%), Positives = 66/138 (47%), Gaps = 19/138 (13%)
Query: 227 KSQVEKIHQQADKIISNIIEERETRLKTGKSEEDGDLVDVLL--RDQENGNLQFPMTIKT 284
K Q ++ + + ++ II +R+ E+ DL+ +L +D E G P+ +
Sbjct: 203 KRQFQEDIKVMNDLVDKIIADRK-----ASGEQSDDLLTHMLNGKDPETGE---PLDDEN 254
Query: 285 IKAVIFEIFAAGTDSSAIAIDRALSEIIKNPRVPKRVQGEVREVFNRKGKVDET----GI 340
I+ I AG +S++ + AL ++KNP V ++ E V VD +
Sbjct: 255 IRYQIITFLIAGHESTSGLLSFALYFLVKNPHVLQKAAEEAARVL-----VDPVPSYKQV 309
Query: 341 EELQFLKLVIKETLKLHP 358
++L+++ +V+ E L+L P
Sbjct: 310 KQLKYVGMVLNEALRLWP 327
>pdb|4DUF|A Chain A, Cytochrome P450 Bm3h-2g9 Mri Sensor Bound To Serotonin
pdb|4DUF|B Chain B, Cytochrome P450 Bm3h-2g9 Mri Sensor Bound To Serotonin
pdb|4DUF|C Chain C, Cytochrome P450 Bm3h-2g9 Mri Sensor Bound To Serotonin
pdb|4DUF|D Chain D, Cytochrome P450 Bm3h-2g9 Mri Sensor Bound To Serotonin
Length = 471
Score = 36.6 bits (83), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 34/138 (24%), Positives = 66/138 (47%), Gaps = 19/138 (13%)
Query: 227 KSQVEKIHQQADKIISNIIEERETRLKTGKSEEDGDLVDVLL--RDQENGNLQFPMTIKT 284
K Q ++ + + ++ II +R+ E+ DL+ +L +D E G P+ +
Sbjct: 202 KRQFQEDIKVMNDLVDKIIADRK-----ASGEQSDDLLTHMLNGKDPETGE---PLDDEN 253
Query: 285 IKAVIFEIFAAGTDSSAIAIDRALSEIIKNPRVPKRVQGEVREVFNRKGKVDET----GI 340
I+ I AG +S++ + AL ++KNP V ++ E V VD +
Sbjct: 254 IRYQIITFLIAGHESTSGLLSFALYFLVKNPHVLQKAAEEAARVL-----VDPVPSYKQV 308
Query: 341 EELQFLKLVIKETLKLHP 358
++L+++ +V+ E L+L P
Sbjct: 309 KQLKYVGMVLNEALRLWP 326
>pdb|4DUD|A Chain A, Cytochrome P450 Bm3h-2g9c6 Mri Sensor, No Ligand
pdb|4DUD|B Chain B, Cytochrome P450 Bm3h-2g9c6 Mri Sensor, No Ligand
pdb|4DUE|A Chain A, Cytochrome P450 Bm3h-2g9c6 Mri Sensor Bound To Serotonin
pdb|4DUE|B Chain B, Cytochrome P450 Bm3h-2g9c6 Mri Sensor Bound To Serotonin
Length = 471
Score = 36.6 bits (83), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 34/138 (24%), Positives = 66/138 (47%), Gaps = 19/138 (13%)
Query: 227 KSQVEKIHQQADKIISNIIEERETRLKTGKSEEDGDLVDVLL--RDQENGNLQFPMTIKT 284
K Q ++ + + ++ II +R+ E+ DL+ +L +D E G P+ +
Sbjct: 202 KRQFQEDIKVMNDLVDKIIADRK-----ASGEQSDDLLTHMLNGKDPETGE---PLDDEN 253
Query: 285 IKAVIFEIFAAGTDSSAIAIDRALSEIIKNPRVPKRVQGEVREVFNRKGKVDET----GI 340
I+ I AG +S++ + AL ++KNP V ++ E V VD +
Sbjct: 254 IRYQIITFLIAGHESTSGLLSFALYFLVKNPHVLQKAAEEAARVL-----VDPVPSYKQV 308
Query: 341 EELQFLKLVIKETLKLHP 358
++L+++ +V+ E L+L P
Sbjct: 309 KQLKYVGMVLNEALRLWP 326
>pdb|3CBD|A Chain A, Directed Evolution Of Cytochrome P450 Bm3, To Octane
Monoxygenase 139-3
pdb|3CBD|B Chain B, Directed Evolution Of Cytochrome P450 Bm3, To Octane
Monoxygenase 139-3
Length = 455
Score = 35.8 bits (81), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 34/138 (24%), Positives = 65/138 (47%), Gaps = 19/138 (13%)
Query: 227 KSQVEKIHQQADKIISNIIEERETRLKTGKSEEDGDLVDVLL--RDQENGNLQFPMTIKT 284
K Q ++ + + ++ II +R+ E+ DL+ +L +D E G P+
Sbjct: 202 KRQFQEDIKVMNDLVDKIIADRK-----ASGEQSDDLLTQMLNGKDPETGE---PLDDGN 253
Query: 285 IKAVIFEIFAAGTDSSAIAIDRALSEIIKNPRVPKRVQGEVREVFNRKGKVDET----GI 340
I I AG ++++ + AL ++KNP V ++V E V VD +
Sbjct: 254 ISYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKVAEEATRVL-----VDPVPSYKQV 308
Query: 341 EELQFLKLVIKETLKLHP 358
++L+++ +V+ E L+L P
Sbjct: 309 KQLKYVGMVLNEALRLWP 326
>pdb|3NPL|A Chain A, Structure Of Ru(Bpy)2(A-Phen)(K97c) P450 Bm3 Heme Domain,
A Ruthenium Modified P450 Bm3 Mutant
pdb|3NPL|B Chain B, Structure Of Ru(Bpy)2(A-Phen)(K97c) P450 Bm3 Heme Domain,
A Ruthenium Modified P450 Bm3 Mutant
Length = 470
Score = 35.4 bits (80), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 33/138 (23%), Positives = 66/138 (47%), Gaps = 19/138 (13%)
Query: 227 KSQVEKIHQQADKIISNIIEERETRLKTGKSEEDGDLVDVLL--RDQENGNLQFPMTIKT 284
K Q ++ + + ++ II +R+ E+ DL+ +L +D E G P+ +
Sbjct: 203 KRQFQEDIKVMNDLVDKIIADRK-----ASGEQSDDLLTHMLNGKDPETGE---PLDDEN 254
Query: 285 IKAVIFEIFAAGTDSSAIAIDRALSEIIKNPRVPKRVQGEVREVFNRKGKVDET----GI 340
I+ I AG ++++ + AL ++KNP V ++ E V VD +
Sbjct: 255 IRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVL-----VDPVPSYKQV 309
Query: 341 EELQFLKLVIKETLKLHP 358
++L+++ +V+ E L+L P
Sbjct: 310 KQLKYVGMVLNEALRLWP 327
>pdb|2BMH|A Chain A, Modeling Protein-Substrate Interactions In The Heme Domain
Of Cytochrome P450bm-3
pdb|2BMH|B Chain B, Modeling Protein-Substrate Interactions In The Heme Domain
Of Cytochrome P450bm-3
pdb|1BU7|A Chain A, Cryogenic Structure Of Cytochrome P450bm-3 Heme Domain
pdb|1BU7|B Chain B, Cryogenic Structure Of Cytochrome P450bm-3 Heme Domain
pdb|2J1M|A Chain A, P450 Bm3 Heme Domain In Complex With Dmso
pdb|2J1M|B Chain B, P450 Bm3 Heme Domain In Complex With Dmso
pdb|2J4S|A Chain A, P450 Bm3 Heme Domain In Complex With Dmso
pdb|2J4S|B Chain B, P450 Bm3 Heme Domain In Complex With Dmso
Length = 455
Score = 35.4 bits (80), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 33/138 (23%), Positives = 66/138 (47%), Gaps = 19/138 (13%)
Query: 227 KSQVEKIHQQADKIISNIIEERETRLKTGKSEEDGDLVDVLL--RDQENGNLQFPMTIKT 284
K Q ++ + + ++ II +R+ E+ DL+ +L +D E G P+ +
Sbjct: 202 KRQFQEDIKVMNDLVDKIIADRK-----ASGEQSDDLLTHMLNGKDPETGE---PLDDEN 253
Query: 285 IKAVIFEIFAAGTDSSAIAIDRALSEIIKNPRVPKRVQGEVREVFNRKGKVDET----GI 340
I+ I AG ++++ + AL ++KNP V ++ E V VD +
Sbjct: 254 IRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVL-----VDPVPSYKQV 308
Query: 341 EELQFLKLVIKETLKLHP 358
++L+++ +V+ E L+L P
Sbjct: 309 KQLKYVGMVLNEALRLWP 326
>pdb|4DU2|B Chain B, Cytochrome P450 Bm3h-B7 Mri Sensor Bound To Dopamine
pdb|4DU2|A Chain A, Cytochrome P450 Bm3h-B7 Mri Sensor Bound To Dopamine
Length = 470
Score = 35.4 bits (80), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 33/138 (23%), Positives = 66/138 (47%), Gaps = 19/138 (13%)
Query: 227 KSQVEKIHQQADKIISNIIEERETRLKTGKSEEDGDLVDVLL--RDQENGNLQFPMTIKT 284
K Q ++ + + ++ II +R+ E+ DL+ +L +D E G P+ +
Sbjct: 203 KRQFQEDIKVMNDLVDKIIADRK-----ASGEQSDDLLTHMLNGKDPETGE---PLDDEN 254
Query: 285 IKAVIFEIFAAGTDSSAIAIDRALSEIIKNPRVPKRVQGEVREVFNRKGKVD----ETGI 340
I+ I AAG ++++ + AL ++KNP ++ E V VD +
Sbjct: 255 IRYQIITFLAAGHEATSGLLSFALYFLVKNPHELQKAAEEAARVL-----VDPVPSHKQV 309
Query: 341 EELQFLKLVIKETLKLHP 358
++L+++ +V+ E L+L P
Sbjct: 310 KQLKYVGMVLNEALRLWP 327
>pdb|1P0X|A Chain A, F393y Mutant Heme Domain Of Flavocytochrome P450 Bm3
pdb|1P0X|B Chain B, F393y Mutant Heme Domain Of Flavocytochrome P450 Bm3
Length = 455
Score = 35.4 bits (80), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 33/138 (23%), Positives = 66/138 (47%), Gaps = 19/138 (13%)
Query: 227 KSQVEKIHQQADKIISNIIEERETRLKTGKSEEDGDLVDVLL--RDQENGNLQFPMTIKT 284
K Q ++ + + ++ II +R+ E+ DL+ +L +D E G P+ +
Sbjct: 202 KRQFQEDIKVMNDLVDKIIADRK-----ASGEQSDDLLTHMLNGKDPETGE---PLDDEN 253
Query: 285 IKAVIFEIFAAGTDSSAIAIDRALSEIIKNPRVPKRVQGEVREVFNRKGKVDET----GI 340
I+ I AG ++++ + AL ++KNP V ++ E V VD +
Sbjct: 254 IRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVL-----VDPVPSYKQV 308
Query: 341 EELQFLKLVIKETLKLHP 358
++L+++ +V+ E L+L P
Sbjct: 309 KQLKYVGMVLNEALRLWP 326
>pdb|1P0W|A Chain A, F393w Mutant Heme Domain Of Flavocytochrome P450 Bm3
pdb|1P0W|B Chain B, F393w Mutant Heme Domain Of Flavocytochrome P450 Bm3
Length = 455
Score = 35.4 bits (80), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 33/138 (23%), Positives = 66/138 (47%), Gaps = 19/138 (13%)
Query: 227 KSQVEKIHQQADKIISNIIEERETRLKTGKSEEDGDLVDVLL--RDQENGNLQFPMTIKT 284
K Q ++ + + ++ II +R+ E+ DL+ +L +D E G P+ +
Sbjct: 202 KRQFQEDIKVMNDLVDKIIADRK-----ASGEQSDDLLTHMLNGKDPETGE---PLDDEN 253
Query: 285 IKAVIFEIFAAGTDSSAIAIDRALSEIIKNPRVPKRVQGEVREVFNRKGKVDET----GI 340
I+ I AG ++++ + AL ++KNP V ++ E V VD +
Sbjct: 254 IRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVL-----VDPVPSYKQV 308
Query: 341 EELQFLKLVIKETLKLHP 358
++L+++ +V+ E L+L P
Sbjct: 309 KQLKYVGMVLNEALRLWP 326
>pdb|2UWH|A Chain A, Cytochrome P450 Bm3 Mutant In Complex With Palmitic Acid
pdb|2UWH|B Chain B, Cytochrome P450 Bm3 Mutant In Complex With Palmitic Acid
pdb|2UWH|C Chain C, Cytochrome P450 Bm3 Mutant In Complex With Palmitic Acid
pdb|2UWH|D Chain D, Cytochrome P450 Bm3 Mutant In Complex With Palmitic Acid
pdb|2UWH|E Chain E, Cytochrome P450 Bm3 Mutant In Complex With Palmitic Acid
pdb|2UWH|F Chain F, Cytochrome P450 Bm3 Mutant In Complex With Palmitic Acid
Length = 458
Score = 35.4 bits (80), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 33/138 (23%), Positives = 66/138 (47%), Gaps = 19/138 (13%)
Query: 227 KSQVEKIHQQADKIISNIIEERETRLKTGKSEEDGDLVDVLL--RDQENGNLQFPMTIKT 284
K Q ++ + + ++ II +R+ E+ DL+ +L +D E G P+ +
Sbjct: 202 KRQFQEDIKVMNDLVDKIIADRK-----ASGEQSDDLLTHMLNGKDPETGE---PLDDEN 253
Query: 285 IKAVIFEIFAAGTDSSAIAIDRALSEIIKNPRVPKRVQGEVREVFNRKGKVDET----GI 340
I+ I AG ++++ + AL ++KNP V ++ E V VD +
Sbjct: 254 IRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVL-----VDPVPSYKQV 308
Query: 341 EELQFLKLVIKETLKLHP 358
++L+++ +V+ E L+L P
Sbjct: 309 KQLKYVGMVLNEALRLWP 326
>pdb|1YQO|A Chain A, T268a Mutant Heme Domain Of Flavocytochrome P450 Bm3
pdb|1YQO|B Chain B, T268a Mutant Heme Domain Of Flavocytochrome P450 Bm3
Length = 455
Score = 35.4 bits (80), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 33/138 (23%), Positives = 66/138 (47%), Gaps = 19/138 (13%)
Query: 227 KSQVEKIHQQADKIISNIIEERETRLKTGKSEEDGDLVDVLL--RDQENGNLQFPMTIKT 284
K Q ++ + + ++ II +R+ E+ DL+ +L +D E G P+ +
Sbjct: 202 KRQFQEDIKVMNDLVDKIIADRK-----ASGEQSDDLLTHMLNGKDPETGE---PLDDEN 253
Query: 285 IKAVIFEIFAAGTDSSAIAIDRALSEIIKNPRVPKRVQGEVREVFNRKGKVDET----GI 340
I+ I AG ++++ + AL ++KNP V ++ E V VD +
Sbjct: 254 IRYQIITFLIAGHEATSGLLSFALYFLVKNPHVLQKAAEEAARVL-----VDPVPSYKQV 308
Query: 341 EELQFLKLVIKETLKLHP 358
++L+++ +V+ E L+L P
Sbjct: 309 KQLKYVGMVLNEALRLWP 326
>pdb|1JME|A Chain A, Crystal Structure Of Phe393his Cytochrome P450 Bm3
pdb|1JME|B Chain B, Crystal Structure Of Phe393his Cytochrome P450 Bm3
Length = 455
Score = 35.4 bits (80), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 33/138 (23%), Positives = 66/138 (47%), Gaps = 19/138 (13%)
Query: 227 KSQVEKIHQQADKIISNIIEERETRLKTGKSEEDGDLVDVLL--RDQENGNLQFPMTIKT 284
K Q ++ + + ++ II +R+ E+ DL+ +L +D E G P+ +
Sbjct: 202 KRQFQEDIKVMNDLVDKIIADRK-----ASGEQSDDLLTHMLNGKDPETGE---PLDDEN 253
Query: 285 IKAVIFEIFAAGTDSSAIAIDRALSEIIKNPRVPKRVQGEVREVFNRKGKVDET----GI 340
I+ I AG ++++ + AL ++KNP V ++ E V VD +
Sbjct: 254 IRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVL-----VDPVPSYKQV 308
Query: 341 EELQFLKLVIKETLKLHP 358
++L+++ +V+ E L+L P
Sbjct: 309 KQLKYVGMVLNEALRLWP 326
>pdb|1P0V|A Chain A, F393a Mutant Heme Domain Of Flavocytochrome P450 Bm3
pdb|1P0V|B Chain B, F393a Mutant Heme Domain Of Flavocytochrome P450 Bm3
Length = 455
Score = 35.4 bits (80), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 33/138 (23%), Positives = 66/138 (47%), Gaps = 19/138 (13%)
Query: 227 KSQVEKIHQQADKIISNIIEERETRLKTGKSEEDGDLVDVLL--RDQENGNLQFPMTIKT 284
K Q ++ + + ++ II +R+ E+ DL+ +L +D E G P+ +
Sbjct: 202 KRQFQEDIKVMNDLVDKIIADRK-----ASGEQSDDLLTHMLNGKDPETGE---PLDDEN 253
Query: 285 IKAVIFEIFAAGTDSSAIAIDRALSEIIKNPRVPKRVQGEVREVFNRKGKVDET----GI 340
I+ I AG ++++ + AL ++KNP V ++ E V VD +
Sbjct: 254 IRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVL-----VDPVPSYKQV 308
Query: 341 EELQFLKLVIKETLKLHP 358
++L+++ +V+ E L+L P
Sbjct: 309 KQLKYVGMVLNEALRLWP 326
>pdb|2X7Y|A Chain A, P450 Bm3 F87a In Complex With Dmso
pdb|2X7Y|B Chain B, P450 Bm3 F87a In Complex With Dmso
pdb|2X80|A Chain A, P450 Bm3 F87a In Complex With Dmso
pdb|2X80|B Chain B, P450 Bm3 F87a In Complex With Dmso
Length = 455
Score = 35.4 bits (80), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 33/138 (23%), Positives = 66/138 (47%), Gaps = 19/138 (13%)
Query: 227 KSQVEKIHQQADKIISNIIEERETRLKTGKSEEDGDLVDVLL--RDQENGNLQFPMTIKT 284
K Q ++ + + ++ II +R+ E+ DL+ +L +D E G P+ +
Sbjct: 202 KRQFQEDIKVMNDLVDKIIADRK-----ASGEQSDDLLTHMLNGKDPETGE---PLDDEN 253
Query: 285 IKAVIFEIFAAGTDSSAIAIDRALSEIIKNPRVPKRVQGEVREVFNRKGKVDET----GI 340
I+ I AG ++++ + AL ++KNP V ++ E V VD +
Sbjct: 254 IRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVL-----VDPVPSYKQV 308
Query: 341 EELQFLKLVIKETLKLHP 358
++L+++ +V+ E L+L P
Sbjct: 309 KQLKYVGMVLNEALRLWP 326
>pdb|1BVY|A Chain A, Complex Of The Heme And Fmn-Binding Domains Of The
Cytochrome P450(Bm-3)
pdb|1BVY|B Chain B, Complex Of The Heme And Fmn-Binding Domains Of The
Cytochrome P450(Bm-3)
Length = 458
Score = 35.4 bits (80), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 33/138 (23%), Positives = 66/138 (47%), Gaps = 19/138 (13%)
Query: 227 KSQVEKIHQQADKIISNIIEERETRLKTGKSEEDGDLVDVLL--RDQENGNLQFPMTIKT 284
K Q ++ + + ++ II +R+ E+ DL+ +L +D E G P+ +
Sbjct: 202 KRQFQEDIKVMNDLVDKIIADRK-----ASGEQSDDLLTHMLNGKDPETGE---PLDDEN 253
Query: 285 IKAVIFEIFAAGTDSSAIAIDRALSEIIKNPRVPKRVQGEVREVFNRKGKVDET----GI 340
I+ I AG ++++ + AL ++KNP V ++ E V VD +
Sbjct: 254 IRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVL-----VDPVPSYKQV 308
Query: 341 EELQFLKLVIKETLKLHP 358
++L+++ +V+ E L+L P
Sbjct: 309 KQLKYVGMVLNEALRLWP 326
>pdb|1JPZ|A Chain A, Crystal Structure Of A Complex Of The Heme Domain Of
P450bm- 3 With N-Palmitoylglycine
pdb|1JPZ|B Chain B, Crystal Structure Of A Complex Of The Heme Domain Of
P450bm- 3 With N-Palmitoylglycine
pdb|1ZO9|A Chain A, Crystal Structure Of The Wild Type Heme Domain Of P450bm-3
With N- Palmitoylmethionine
pdb|1ZO9|B Chain B, Crystal Structure Of The Wild Type Heme Domain Of P450bm-3
With N- Palmitoylmethionine
Length = 473
Score = 35.4 bits (80), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 33/138 (23%), Positives = 66/138 (47%), Gaps = 19/138 (13%)
Query: 227 KSQVEKIHQQADKIISNIIEERETRLKTGKSEEDGDLVDVLL--RDQENGNLQFPMTIKT 284
K Q ++ + + ++ II +R+ E+ DL+ +L +D E G P+ +
Sbjct: 205 KRQFQEDIKVMNDLVDKIIADRK-----ASGEQSDDLLTHMLNGKDPETGE---PLDDEN 256
Query: 285 IKAVIFEIFAAGTDSSAIAIDRALSEIIKNPRVPKRVQGEVREVFNRKGKVDET----GI 340
I+ I AG ++++ + AL ++KNP V ++ E V VD +
Sbjct: 257 IRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVL-----VDPVPSYKQV 311
Query: 341 EELQFLKLVIKETLKLHP 358
++L+++ +V+ E L+L P
Sbjct: 312 KQLKYVGMVLNEALRLWP 329
>pdb|3DGI|A Chain A, Crystal Structure Of F87aT268A MUTANT OF CYP BM3
pdb|3DGI|B Chain B, Crystal Structure Of F87aT268A MUTANT OF CYP BM3
Length = 461
Score = 35.4 bits (80), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 33/138 (23%), Positives = 66/138 (47%), Gaps = 19/138 (13%)
Query: 227 KSQVEKIHQQADKIISNIIEERETRLKTGKSEEDGDLVDVLL--RDQENGNLQFPMTIKT 284
K Q ++ + + ++ II +R+ E+ DL+ +L +D E G P+ +
Sbjct: 202 KRQFQEDIKVMNDLVDKIIADRK-----ASGEQSDDLLTHMLNGKDPETGE---PLDDEN 253
Query: 285 IKAVIFEIFAAGTDSSAIAIDRALSEIIKNPRVPKRVQGEVREVFNRKGKVDET----GI 340
I+ I AG ++++ + AL ++KNP V ++ E V VD +
Sbjct: 254 IRYQIITFLIAGHEATSGLLSFALYFLVKNPHVLQKAAEEAARVL-----VDPVPSYKQV 308
Query: 341 EELQFLKLVIKETLKLHP 358
++L+++ +V+ E L+L P
Sbjct: 309 KQLKYVGMVLNEALRLWP 326
>pdb|1ZO4|A Chain A, Crystal Structure Of A328s Mutant Of The Heme Domain Of
P450bm-3
pdb|1ZO4|B Chain B, Crystal Structure Of A328s Mutant Of The Heme Domain Of
P450bm-3
Length = 473
Score = 35.4 bits (80), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 33/138 (23%), Positives = 66/138 (47%), Gaps = 19/138 (13%)
Query: 227 KSQVEKIHQQADKIISNIIEERETRLKTGKSEEDGDLVDVLL--RDQENGNLQFPMTIKT 284
K Q ++ + + ++ II +R+ E+ DL+ +L +D E G P+ +
Sbjct: 205 KRQFQEDIKVMNDLVDKIIADRK-----ASGEQSDDLLTHMLNGKDPETGE---PLDDEN 256
Query: 285 IKAVIFEIFAAGTDSSAIAIDRALSEIIKNPRVPKRVQGEVREVFNRKGKVDET----GI 340
I+ I AG ++++ + AL ++KNP V ++ E V VD +
Sbjct: 257 IRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVL-----VDPVPSYKQV 311
Query: 341 EELQFLKLVIKETLKLHP 358
++L+++ +V+ E L+L P
Sbjct: 312 KQLKYVGMVLNEALRLWP 329
>pdb|1ZOA|A Chain A, Crystal Structure Of A328v Mutant Of The Heme Domain Of
P450bm-3 With N-Palmitoylglycine
pdb|1ZOA|B Chain B, Crystal Structure Of A328v Mutant Of The Heme Domain Of
P450bm-3 With N-Palmitoylglycine
Length = 473
Score = 35.4 bits (80), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 33/138 (23%), Positives = 66/138 (47%), Gaps = 19/138 (13%)
Query: 227 KSQVEKIHQQADKIISNIIEERETRLKTGKSEEDGDLVDVLL--RDQENGNLQFPMTIKT 284
K Q ++ + + ++ II +R+ E+ DL+ +L +D E G P+ +
Sbjct: 205 KRQFQEDIKVMNDLVDKIIADRK-----ASGEQSDDLLTHMLNGKDPETGE---PLDDEN 256
Query: 285 IKAVIFEIFAAGTDSSAIAIDRALSEIIKNPRVPKRVQGEVREVFNRKGKVDET----GI 340
I+ I AG ++++ + AL ++KNP V ++ E V VD +
Sbjct: 257 IRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVL-----VDPVPSYKQV 311
Query: 341 EELQFLKLVIKETLKLHP 358
++L+++ +V+ E L+L P
Sbjct: 312 KQLKYVGMVLNEALRLWP 329
>pdb|3BEN|A Chain A, Structure Of N-(12-Imidazolyl-Dodecanoyl)-L-Leucine
Inhibitor Bound To The Heme Domain Of Cytochrome
P450-Bm3
pdb|3BEN|B Chain B, Structure Of N-(12-Imidazolyl-Dodecanoyl)-L-Leucine
Inhibitor Bound To The Heme Domain Of Cytochrome
P450-Bm3
Length = 470
Score = 35.0 bits (79), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 33/138 (23%), Positives = 66/138 (47%), Gaps = 19/138 (13%)
Query: 227 KSQVEKIHQQADKIISNIIEERETRLKTGKSEEDGDLVDVLL--RDQENGNLQFPMTIKT 284
K Q ++ + + ++ II +R+ E+ DL+ +L +D E G P+ +
Sbjct: 203 KRQFQEDIKVMNDLVDKIIADRK-----ASGEQSDDLLTHMLNGKDPETGE---PLDDEN 254
Query: 285 IKAVIFEIFAAGTDSSAIAIDRALSEIIKNPRVPKRVQGEVREVFNRKGKVDET----GI 340
I+ I AG ++++ + AL ++KNP V ++ E V VD +
Sbjct: 255 IRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVL-----VDPVPSYKQV 309
Query: 341 EELQFLKLVIKETLKLHP 358
++L+++ +V+ E L+L P
Sbjct: 310 KQLKYVGMVLNEALRLWP 327
>pdb|1YQP|A Chain A, T268n Mutant Cytochrome Domain Of Flavocytochrome P450 Bm3
pdb|1YQP|B Chain B, T268n Mutant Cytochrome Domain Of Flavocytochrome P450 Bm3
Length = 455
Score = 35.0 bits (79), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 33/138 (23%), Positives = 66/138 (47%), Gaps = 19/138 (13%)
Query: 227 KSQVEKIHQQADKIISNIIEERETRLKTGKSEEDGDLVDVLL--RDQENGNLQFPMTIKT 284
K Q ++ + + ++ II +R+ E+ DL+ +L +D E G P+ +
Sbjct: 202 KRQFQEDIKVMNDLVDKIIADRK-----ASGEQSDDLLTHMLNGKDPETGE---PLDDEN 253
Query: 285 IKAVIFEIFAAGTDSSAIAIDRALSEIIKNPRVPKRVQGEVREVFNRKGKVDET----GI 340
I+ I AG ++++ + AL ++KNP V ++ E V VD +
Sbjct: 254 IRYQIITFLIAGHENTSGLLSFALYFLVKNPHVLQKAAEEAARVL-----VDPVPSYKQV 308
Query: 341 EELQFLKLVIKETLKLHP 358
++L+++ +V+ E L+L P
Sbjct: 309 KQLKYVGMVLNEALRLWP 326
>pdb|3M4V|A Chain A, Crystal Structure Of The A330p Mutant Of Cytochrome P450
Bm3
pdb|3M4V|B Chain B, Crystal Structure Of The A330p Mutant Of Cytochrome P450
Bm3
Length = 482
Score = 35.0 bits (79), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 33/138 (23%), Positives = 66/138 (47%), Gaps = 19/138 (13%)
Query: 227 KSQVEKIHQQADKIISNIIEERETRLKTGKSEEDGDLVDVLL--RDQENGNLQFPMTIKT 284
K Q ++ + + ++ II +R+ E+ DL+ +L +D E G P+ +
Sbjct: 203 KRQFQEDIKVMNDLVDKIIADRK-----ASGEQSDDLLTHMLNGKDPETGE---PLDDEN 254
Query: 285 IKAVIFEIFAAGTDSSAIAIDRALSEIIKNPRVPKRVQGEVREVFNRKGKVDET----GI 340
I+ I AG ++++ + AL ++KNP V ++ E V VD +
Sbjct: 255 IRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVL-----VDPVPSYKQV 309
Query: 341 EELQFLKLVIKETLKLHP 358
++L+++ +V+ E L+L P
Sbjct: 310 KQLKYVGMVLNEALRLWP 327
>pdb|2NNB|A Chain A, The Q403k Mutnat Heme Domain Of Flavocytochrome P450 Bm3
pdb|2NNB|B Chain B, The Q403k Mutnat Heme Domain Of Flavocytochrome P450 Bm3
Length = 471
Score = 35.0 bits (79), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 33/138 (23%), Positives = 66/138 (47%), Gaps = 19/138 (13%)
Query: 227 KSQVEKIHQQADKIISNIIEERETRLKTGKSEEDGDLVDVLL--RDQENGNLQFPMTIKT 284
K Q ++ + + ++ II +R+ E+ DL+ +L +D E G P+ +
Sbjct: 202 KRQFQEDIKVMNDLVDKIIADRK-----ASGEQSDDLLTHMLNGKDPETGE---PLDDEN 253
Query: 285 IKAVIFEIFAAGTDSSAIAIDRALSEIIKNPRVPKRVQGEVREVFNRKGKVDET----GI 340
I+ I AG ++++ + AL ++KNP V ++ E V VD +
Sbjct: 254 IRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVL-----VDPVPSYKQV 308
Query: 341 EELQFLKLVIKETLKLHP 358
++L+++ +V+ E L+L P
Sbjct: 309 KQLKYVGMVLNEALRLWP 326
>pdb|2IJ2|A Chain A, Atomic Structure Of The Heme Domain Of Flavocytochrome
P450- Bm3
pdb|2IJ2|B Chain B, Atomic Structure Of The Heme Domain Of Flavocytochrome
P450- Bm3
Length = 470
Score = 35.0 bits (79), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 33/138 (23%), Positives = 66/138 (47%), Gaps = 19/138 (13%)
Query: 227 KSQVEKIHQQADKIISNIIEERETRLKTGKSEEDGDLVDVLL--RDQENGNLQFPMTIKT 284
K Q ++ + + ++ II +R+ E+ DL+ +L +D E G P+ +
Sbjct: 202 KRQFQEDIKVMNDLVDKIIADRK-----ASGEQSDDLLTHMLNGKDPETGE---PLDDEN 253
Query: 285 IKAVIFEIFAAGTDSSAIAIDRALSEIIKNPRVPKRVQGEVREVFNRKGKVDET----GI 340
I+ I AG ++++ + AL ++KNP V ++ E V VD +
Sbjct: 254 IRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVL-----VDPVPSYKQV 308
Query: 341 EELQFLKLVIKETLKLHP 358
++L+++ +V+ E L+L P
Sbjct: 309 KQLKYVGMVLNEALRLWP 326
>pdb|2HPD|A Chain A, Crystal Structure Of Hemoprotein Domain Of P450bm-3, A
Prototype For Microsomal P450's
pdb|2HPD|B Chain B, Crystal Structure Of Hemoprotein Domain Of P450bm-3, A
Prototype For Microsomal P450's
pdb|1FAG|A Chain A, Structure Of Cytochrome P450
pdb|1FAG|B Chain B, Structure Of Cytochrome P450
pdb|1FAG|C Chain C, Structure Of Cytochrome P450
pdb|1FAG|D Chain D, Structure Of Cytochrome P450
Length = 471
Score = 35.0 bits (79), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 33/138 (23%), Positives = 66/138 (47%), Gaps = 19/138 (13%)
Query: 227 KSQVEKIHQQADKIISNIIEERETRLKTGKSEEDGDLVDVLL--RDQENGNLQFPMTIKT 284
K Q ++ + + ++ II +R+ E+ DL+ +L +D E G P+ +
Sbjct: 202 KRQFQEDIKVMNDLVDKIIADRK-----ASGEQSDDLLTHMLNGKDPETGE---PLDDEN 253
Query: 285 IKAVIFEIFAAGTDSSAIAIDRALSEIIKNPRVPKRVQGEVREVFNRKGKVDET----GI 340
I+ I AG ++++ + AL ++KNP V ++ E V VD +
Sbjct: 254 IRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVL-----VDPVPSYKQV 308
Query: 341 EELQFLKLVIKETLKLHP 358
++L+++ +V+ E L+L P
Sbjct: 309 KQLKYVGMVLNEALRLWP 326
>pdb|3KX4|A Chain A, Crystal Structure Of Bacillus Megaterium Bm3 Heme Domain
Mut
pdb|3KX4|B Chain B, Crystal Structure Of Bacillus Megaterium Bm3 Heme Domain
Mut
Length = 470
Score = 35.0 bits (79), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 33/138 (23%), Positives = 66/138 (47%), Gaps = 19/138 (13%)
Query: 227 KSQVEKIHQQADKIISNIIEERETRLKTGKSEEDGDLVDVLL--RDQENGNLQFPMTIKT 284
K Q ++ + + ++ II +R+ E+ DL+ +L +D E G P+ +
Sbjct: 202 KRQFQEDIKVMNDLVDKIIADRK-----ASGEQSDDLLTHMLNGKDPETGE---PLDDEN 253
Query: 285 IKAVIFEIFAAGTDSSAIAIDRALSEIIKNPRVPKRVQGEVREVFNRKGKVDET----GI 340
I+ I AG ++++ + AL ++KNP V ++ E V VD +
Sbjct: 254 IRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVL-----VDPVPSYKQV 308
Query: 341 EELQFLKLVIKETLKLHP 358
++L+++ +V+ E L+L P
Sbjct: 309 KQLKYVGMVLNEALRLWP 326
>pdb|4DTW|B Chain B, Cytochrome P450 Bm3h-8c8 Mri Sensor Bound To Serotonin
pdb|4DTW|A Chain A, Cytochrome P450 Bm3h-8c8 Mri Sensor Bound To Serotonin
pdb|4DTY|B Chain B, Cytochrome P450 Bm3h-8c8 Mri Sensor, No Ligand
pdb|4DTY|A Chain A, Cytochrome P450 Bm3h-8c8 Mri Sensor, No Ligand
pdb|4DTZ|A Chain A, Cytochrome P450 Bm3h-8c8 Mri Sensor Bound To Dopamine
pdb|4DTZ|B Chain B, Cytochrome P450 Bm3h-8c8 Mri Sensor Bound To Dopamine
Length = 469
Score = 35.0 bits (79), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 33/138 (23%), Positives = 66/138 (47%), Gaps = 19/138 (13%)
Query: 227 KSQVEKIHQQADKIISNIIEERETRLKTGKSEEDGDLVDVLL--RDQENGNLQFPMTIKT 284
K Q ++ + + ++ II +R+ E+ DL+ +L +D E G P+ +
Sbjct: 202 KRQFQEDIKVMNDLVDKIIADRK-----ASGEQSDDLLTHMLNGKDPETGE---PLDDEN 253
Query: 285 IKAVIFEIFAAGTDSSAIAIDRALSEIIKNPRVPKRVQGEVREVFNRKGKVDET----GI 340
I+ I AAG ++++ + AL ++KNP ++ E V VD +
Sbjct: 254 IRYQIITFLAAGHEATSGLLSFALYFLVKNPHELQKAAEEAARVL-----VDPVPSYKQV 308
Query: 341 EELQFLKLVIKETLKLHP 358
++L+++ +V+ E L+L P
Sbjct: 309 KQLKYVGMVLNEALRLWP 326
>pdb|3KX3|A Chain A, Crystal Structure Of Bacillus Megaterium Bm3 Heme Domain
Mut
pdb|3KX3|B Chain B, Crystal Structure Of Bacillus Megaterium Bm3 Heme Domain
Mut
Length = 470
Score = 35.0 bits (79), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 33/138 (23%), Positives = 66/138 (47%), Gaps = 19/138 (13%)
Query: 227 KSQVEKIHQQADKIISNIIEERETRLKTGKSEEDGDLVDVLL--RDQENGNLQFPMTIKT 284
K Q ++ + + ++ II +R+ E+ DL+ +L +D E G P+ +
Sbjct: 202 KRQFQEDIKVMNDLVDKIIADRK-----ASGEQSDDLLTHMLNGKDPETGE---PLDDEN 253
Query: 285 IKAVIFEIFAAGTDSSAIAIDRALSEIIKNPRVPKRVQGEVREVFNRKGKVDET----GI 340
I+ I AG ++++ + AL ++KNP V ++ E V VD +
Sbjct: 254 IRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVL-----VDPVPSYKQV 308
Query: 341 EELQFLKLVIKETLKLHP 358
++L+++ +V+ E L+L P
Sbjct: 309 KQLKYVGMVLNEALRLWP 326
>pdb|1FAH|A Chain A, Structure Of Cytochrome P450
pdb|1FAH|B Chain B, Structure Of Cytochrome P450
Length = 471
Score = 35.0 bits (79), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 33/138 (23%), Positives = 66/138 (47%), Gaps = 19/138 (13%)
Query: 227 KSQVEKIHQQADKIISNIIEERETRLKTGKSEEDGDLVDVLL--RDQENGNLQFPMTIKT 284
K Q ++ + + ++ II +R+ E+ DL+ +L +D E G P+ +
Sbjct: 202 KRQFQEDIKVMNDLVDKIIADRK-----ASGEQSDDLLTHMLNGKDPETGE---PLDDEN 253
Query: 285 IKAVIFEIFAAGTDSSAIAIDRALSEIIKNPRVPKRVQGEVREVFNRKGKVDET----GI 340
I+ I AG ++++ + AL ++KNP V ++ E V VD +
Sbjct: 254 IRYQIITFLIAGHEATSGLLSFALYFLVKNPHVLQKAAEEAARVL-----VDPVPSYKQV 308
Query: 341 EELQFLKLVIKETLKLHP 358
++L+++ +V+ E L+L P
Sbjct: 309 KQLKYVGMVLNEALRLWP 326
>pdb|3HF2|A Chain A, Crystal Structure Of The I401p Mutant Of Cytochrome P450
Bm3
pdb|3HF2|B Chain B, Crystal Structure Of The I401p Mutant Of Cytochrome P450
Bm3
Length = 482
Score = 35.0 bits (79), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 33/138 (23%), Positives = 66/138 (47%), Gaps = 19/138 (13%)
Query: 227 KSQVEKIHQQADKIISNIIEERETRLKTGKSEEDGDLVDVLL--RDQENGNLQFPMTIKT 284
K Q ++ + + ++ II +R+ E+ DL+ +L +D E G P+ +
Sbjct: 203 KRQFQEDIKVMNDLVDKIIADRK-----ASGEQSDDLLTHMLNGKDPETGE---PLDDEN 254
Query: 285 IKAVIFEIFAAGTDSSAIAIDRALSEIIKNPRVPKRVQGEVREVFNRKGKVDET----GI 340
I+ I AG ++++ + AL ++KNP V ++ E V VD +
Sbjct: 255 IRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVL-----VDPVPSYKQV 309
Query: 341 EELQFLKLVIKETLKLHP 358
++L+++ +V+ E L+L P
Sbjct: 310 KQLKYVGMVLNEALRLWP 327
>pdb|3EKB|A Chain A, Crystal Structure Of The A264c Mutant Heme Domain Of
Cytochrome P450 Bm3
pdb|3EKB|B Chain B, Crystal Structure Of The A264c Mutant Heme Domain Of
Cytochrome P450 Bm3
Length = 470
Score = 33.9 bits (76), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 32/138 (23%), Positives = 65/138 (47%), Gaps = 19/138 (13%)
Query: 227 KSQVEKIHQQADKIISNIIEERETRLKTGKSEEDGDLVDVLL--RDQENGNLQFPMTIKT 284
K Q ++ + + ++ II +R+ E+ DL+ +L +D E G P+ +
Sbjct: 202 KRQFQEDIKVMNDLVDKIIADRK-----ASGEQSDDLLTHMLNGKDPETGE---PLDDEN 253
Query: 285 IKAVIFEIFAAGTDSSAIAIDRALSEIIKNPRVPKRVQGEVREVFNRKGKVDET----GI 340
I+ I G ++++ + AL ++KNP V ++ E V VD +
Sbjct: 254 IRYQIITFLICGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVL-----VDPVPSYKQV 308
Query: 341 EELQFLKLVIKETLKLHP 358
++L+++ +V+ E L+L P
Sbjct: 309 KQLKYVGMVLNEALRLWP 326
>pdb|3KX5|A Chain A, Crystal Structure Of Bacillus Megaterium Bm3 Heme Domain
Mut
pdb|3KX5|B Chain B, Crystal Structure Of Bacillus Megaterium Bm3 Heme Domain
Mut
Length = 470
Score = 33.9 bits (76), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 33/138 (23%), Positives = 66/138 (47%), Gaps = 19/138 (13%)
Query: 227 KSQVEKIHQQADKIISNIIEERETRLKTGKSEEDGDLVDVLL--RDQENGNLQFPMTIKT 284
K Q ++ + + ++ II +R+ E+ DL+ +L +D E G P+ +
Sbjct: 202 KRQFQEDIKVMNDLVDKIIADRK-----ASGEQSDDLLTHMLNGKDPETGE---PLDDEN 253
Query: 285 IKAVIFEIFAAGTDSSAIAIDRALSEIIKNPRVPKRVQGEVREVFNRKGKVDET----GI 340
I+ I AG ++++ + AL ++KNP V ++ E V VD +
Sbjct: 254 IRYQIITELIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVL-----VDPVPSYKQV 308
Query: 341 EELQFLKLVIKETLKLHP 358
++L+++ +V+ E L+L P
Sbjct: 309 KQLKYVGMVLNEALRLWP 326
>pdb|3QI8|B Chain B, Evolved Variant Of Cytochrome P450 (Bm3, Cyp102a1)
pdb|3QI8|A Chain A, Evolved Variant Of Cytochrome P450 (Bm3, Cyp102a1)
Length = 472
Score = 33.9 bits (76), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 32/138 (23%), Positives = 66/138 (47%), Gaps = 19/138 (13%)
Query: 227 KSQVEKIHQQADKIISNIIEERETRLKTGKSEEDGDLVDVLL--RDQENGNLQFPMTIKT 284
K Q ++ + + ++ II +R+ E+ DL+ +L +D E G P+ +
Sbjct: 203 KRQFQEDIKVMNDLVDKIIADRK-----ASGEQSDDLLTHMLHGKDPETGE---PLDDEN 254
Query: 285 IKAVIFEIFAAGTDSSAIAIDRALSEIIKNPRVPKRVQGEVREVFNRKGKVDET----GI 340
I+ I AG ++++ + AL ++KNP V ++ E V VD +
Sbjct: 255 IRYQIITFLIAGHETTSGLLTFALYFLVKNPHVLQKAAEEAARVL-----VDPVPSYKQV 309
Query: 341 EELQFLKLVIKETLKLHP 358
++L+++ +V+ E L++ P
Sbjct: 310 KQLKYVGMVLNEALRIWP 327
>pdb|2IJ4|A Chain A, Structure Of The A264k Mutant Of Cytochrome P450 Bm3
pdb|2IJ4|B Chain B, Structure Of The A264k Mutant Of Cytochrome P450 Bm3
Length = 470
Score = 33.1 bits (74), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 32/138 (23%), Positives = 65/138 (47%), Gaps = 19/138 (13%)
Query: 227 KSQVEKIHQQADKIISNIIEERETRLKTGKSEEDGDLVDVLL--RDQENGNLQFPMTIKT 284
K Q ++ + + ++ II +R+ E+ DL+ +L +D E G P+ +
Sbjct: 202 KRQFQEDIKVMNDLVDKIIADRK-----ASGEQSDDLLTHMLNGKDPETGE---PLDDEN 253
Query: 285 IKAVIFEIFAAGTDSSAIAIDRALSEIIKNPRVPKRVQGEVREVFNRKGKVDET----GI 340
I+ I G ++++ + AL ++KNP V ++ E V VD +
Sbjct: 254 IRYQIITFLIKGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVL-----VDPVPSYKQV 308
Query: 341 EELQFLKLVIKETLKLHP 358
++L+++ +V+ E L+L P
Sbjct: 309 KQLKYVGMVLNEALRLWP 326
>pdb|3PSX|A Chain A, Crystal Structure Of The Kt2 Mutant Of Cytochrome P450 Bm3
pdb|3PSX|B Chain B, Crystal Structure Of The Kt2 Mutant Of Cytochrome P450 Bm3
Length = 487
Score = 33.1 bits (74), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 32/138 (23%), Positives = 65/138 (47%), Gaps = 19/138 (13%)
Query: 227 KSQVEKIHQQADKIISNIIEERETRLKTGKSEEDGDLVDVLL--RDQENGNLQFPMTIKT 284
K Q ++ + + ++ II +R+ E+ DL+ +L +D E G P+ +
Sbjct: 208 KRQFQEDIKVMNDLVDKIIADRK-----ASGEQSDDLLTHMLHGKDPETGE---PLDDEN 259
Query: 285 IKAVIFEIFAAGTDSSAIAIDRALSEIIKNPRVPKRVQGEVREVFNRKGKVDET----GI 340
I+ I AG ++++ + L ++KNP V ++ E V VD +
Sbjct: 260 IRYQIVTFLIAGHETTSGLLSFTLYFLVKNPHVLQKAAEEAARVL-----VDPVPSYKQV 314
Query: 341 EELQFLKLVIKETLKLHP 358
++L+++ +V+ E L+L P
Sbjct: 315 KQLKYVGMVLNEALRLWP 332
>pdb|3EKF|A Chain A, Crystal Structure Of The A264q Heme Domain Of Cytochrome
P450 Bm3
pdb|3EKF|B Chain B, Crystal Structure Of The A264q Heme Domain Of Cytochrome
P450 Bm3
Length = 470
Score = 33.1 bits (74), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 32/138 (23%), Positives = 65/138 (47%), Gaps = 19/138 (13%)
Query: 227 KSQVEKIHQQADKIISNIIEERETRLKTGKSEEDGDLVDVLL--RDQENGNLQFPMTIKT 284
K Q ++ + + ++ II +R+ E+ DL+ +L +D E G P+ +
Sbjct: 202 KRQFQEDIKVMNDLVDKIIADRK-----ASGEQSDDLLTHMLNGKDPETGE---PLDDEN 253
Query: 285 IKAVIFEIFAAGTDSSAIAIDRALSEIIKNPRVPKRVQGEVREVFNRKGKVDET----GI 340
I+ I G ++++ + AL ++KNP V ++ E V VD +
Sbjct: 254 IRYQIITFLIQGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVL-----VDPVPSYKQV 308
Query: 341 EELQFLKLVIKETLKLHP 358
++L+++ +V+ E L+L P
Sbjct: 309 KQLKYVGMVLNEALRLWP 326
>pdb|3EKD|A Chain A, Crystal Structure Of The A264m Heme Domain Of Cytochrome
P450 Bm3
pdb|3EKD|B Chain B, Crystal Structure Of The A264m Heme Domain Of Cytochrome
P450 Bm3
Length = 470
Score = 33.1 bits (74), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 32/138 (23%), Positives = 65/138 (47%), Gaps = 19/138 (13%)
Query: 227 KSQVEKIHQQADKIISNIIEERETRLKTGKSEEDGDLVDVLL--RDQENGNLQFPMTIKT 284
K Q ++ + + ++ II +R+ E+ DL+ +L +D E G P+ +
Sbjct: 202 KRQFQEDIKVMNDLVDKIIADRK-----ASGEQSDDLLTHMLNGKDPETGE---PLDDEN 253
Query: 285 IKAVIFEIFAAGTDSSAIAIDRALSEIIKNPRVPKRVQGEVREVFNRKGKVDET----GI 340
I+ I G ++++ + AL ++KNP V ++ E V VD +
Sbjct: 254 IRYQIITFLIMGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVL-----VDPVPSYKQV 308
Query: 341 EELQFLKLVIKETLKLHP 358
++L+++ +V+ E L+L P
Sbjct: 309 KQLKYVGMVLNEALRLWP 326
>pdb|1SMI|A Chain A, A Single Mutation Of P450 Bm3 Induces The Conformational
Rearrangement Seen Upon Substrate-Binding In Wild-Type
Enzyme
pdb|1SMI|B Chain B, A Single Mutation Of P450 Bm3 Induces The Conformational
Rearrangement Seen Upon Substrate-Binding In Wild-Type
Enzyme
pdb|1SMJ|A Chain A, Structure Of The A264e Mutant Of Cytochrome P450 Bm3
Complexed With Palmitoleate
pdb|1SMJ|B Chain B, Structure Of The A264e Mutant Of Cytochrome P450 Bm3
Complexed With Palmitoleate
pdb|1SMJ|C Chain C, Structure Of The A264e Mutant Of Cytochrome P450 Bm3
Complexed With Palmitoleate
pdb|1SMJ|D Chain D, Structure Of The A264e Mutant Of Cytochrome P450 Bm3
Complexed With Palmitoleate
Length = 471
Score = 33.1 bits (74), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 32/138 (23%), Positives = 65/138 (47%), Gaps = 19/138 (13%)
Query: 227 KSQVEKIHQQADKIISNIIEERETRLKTGKSEEDGDLVDVLL--RDQENGNLQFPMTIKT 284
K Q ++ + + ++ II +R+ E+ DL+ +L +D E G P+ +
Sbjct: 202 KRQFQEDIKVMNDLVDKIIADRK-----ASGEQSDDLLTHMLNGKDPETGE---PLDDEN 253
Query: 285 IKAVIFEIFAAGTDSSAIAIDRALSEIIKNPRVPKRVQGEVREVFNRKGKVDET----GI 340
I+ I G ++++ + AL ++KNP V ++ E V VD +
Sbjct: 254 IRYQIITFLIEGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVL-----VDPVPSYKQV 308
Query: 341 EELQFLKLVIKETLKLHP 358
++L+++ +V+ E L+L P
Sbjct: 309 KQLKYVGMVLNEALRLWP 326
>pdb|2IJ3|A Chain A, Structure Of The A264h Mutant Of Cytochrome P450 Bm3
pdb|2IJ3|B Chain B, Structure Of The A264h Mutant Of Cytochrome P450 Bm3
Length = 470
Score = 33.1 bits (74), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 32/138 (23%), Positives = 65/138 (47%), Gaps = 19/138 (13%)
Query: 227 KSQVEKIHQQADKIISNIIEERETRLKTGKSEEDGDLVDVLL--RDQENGNLQFPMTIKT 284
K Q ++ + + ++ II +R+ E+ DL+ +L +D E G P+ +
Sbjct: 202 KRQFQEDIKVMNDLVDKIIADRK-----ASGEQSDDLLTHMLNGKDPETGE---PLDDEN 253
Query: 285 IKAVIFEIFAAGTDSSAIAIDRALSEIIKNPRVPKRVQGEVREVFNRKGKVDET----GI 340
I+ I G ++++ + AL ++KNP V ++ E V VD +
Sbjct: 254 IRYQIITFLIHGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVL-----VDPVPSYKQV 308
Query: 341 EELQFLKLVIKETLKLHP 358
++L+++ +V+ E L+L P
Sbjct: 309 KQLKYVGMVLNEALRLWP 326
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 31.2 bits (69), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 37/82 (45%), Gaps = 4/82 (4%)
Query: 326 REVFNRKGKVDETGIEELQFLKLVIKETLKLHPPGSLDPKYWTEPESFILERFPDSS--I 383
R++ R V E + ++ L KE G L P WT PE+ ++F S
Sbjct: 141 RDLAARNVLVSEDNVAKVSDFGLT-KEASSTQDTGKL-PVKWTAPEALREKKFSTKSDVW 198
Query: 384 NFQVNNFEYIAFGSVPILRFPL 405
+F + +E +FG VP R PL
Sbjct: 199 SFGILLWEIYSFGRVPYPRIPL 220
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 30.8 bits (68), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 37/82 (45%), Gaps = 4/82 (4%)
Query: 326 REVFNRKGKVDETGIEELQFLKLVIKETLKLHPPGSLDPKYWTEPESFILERFPDSS--I 383
R++ R V E + ++ L KE G L P WT PE+ ++F S
Sbjct: 126 RDLAARNVLVSEDNVAKVSDFGLT-KEASSTQDTGKL-PVKWTAPEALREKKFSTKSDVW 183
Query: 384 NFQVNNFEYIAFGSVPILRFPL 405
+F + +E +FG VP R PL
Sbjct: 184 SFGILLWEIYSFGRVPYPRIPL 205
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 30.8 bits (68), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 37/82 (45%), Gaps = 4/82 (4%)
Query: 326 REVFNRKGKVDETGIEELQFLKLVIKETLKLHPPGSLDPKYWTEPESFILERFPDSS--I 383
R++ R V E + ++ L KE G L P WT PE+ ++F S
Sbjct: 313 RDLAARNVLVSEDNVAKVSDFGLT-KEASSTQDTGKL-PVKWTAPEALREKKFSTKSDVW 370
Query: 384 NFQVNNFEYIAFGSVPILRFPL 405
+F + +E +FG VP R PL
Sbjct: 371 SFGILLWEIYSFGRVPYPRIPL 392
>pdb|3LD6|A Chain A, Crystal Structure Of Human Lanosterol 14alpha-Demethylase
(C Complex With Ketoconazole
pdb|3LD6|B Chain B, Crystal Structure Of Human Lanosterol 14alpha-Demethylase
(C Complex With Ketoconazole
pdb|3JUS|A Chain A, Crystal Structure Of Human Lanosterol 14alpha-Demethylase
(Cyp51) In Complex With Econazole
pdb|3JUS|B Chain B, Crystal Structure Of Human Lanosterol 14alpha-Demethylase
(Cyp51) In Complex With Econazole
pdb|3JUV|A Chain A, Crystal Structure Of Human Lanosterol 14alpha-Demethylase
(C
Length = 461
Score = 30.0 bits (66), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 74/343 (21%), Positives = 137/343 (39%), Gaps = 48/343 (13%)
Query: 46 SLPPG----PWKLPIIGNLHHLV--GSLPHHRLRNLANNYGPIM-YLQIGEHPTILVSSP 98
+LP G P+ I L H + G P L N YGP+ + +G+ T L+ S
Sbjct: 5 TLPAGVKSPPYIFSPIPFLGHAIAFGKSPIEFLENAYEKYGPVFSFTMVGKTFTYLLGSD 64
Query: 99 QSAKGVMQTHDEFFATRVETVATKIMTYDFS-AVSFAPYGEQWIELRKL----------- 146
+A +++ A E V +++ T F V++ ++E +K+
Sbjct: 65 AAALLFNSKNEDLNA---EDVYSRLTTPVFGKGVAYDVPNPVFLEQKKMLKSGLNIAHFK 121
Query: 147 ---CTMELSSKKRDQSFRYDREEEVSEVIRS-IASKAGSVTNLSDIVSSLAYNLFLKIAF 202
+E +K+ +S+ E+ V E + I A + +I S L + A
Sbjct: 122 QHVSIIEKETKEYFESWGESGEKNVFEALSELIILTASHCLHGKEIRSQLNEKVAQLYAD 181
Query: 203 LAAAGSNTADLFPSIKFLQLIAGVKSQVEKIHQQADKIISNIIEERETRLKTGKSEEDGD 262
L S+ A L P +L L + + ++ H++ I I++R +S+E D
Sbjct: 182 LDGGFSHAAWLLPG--WLPLPSFRRR--DRAHREIKDIFYKAIQKRR------QSQEKID 231
Query: 263 -----LVDVLLRDQENGNLQFPMTIKTIKAVIFEIFAAGTDSSAIAIDRALSEIIKNPRV 317
L+D +D P+T + ++ + AG +S+ + ++ +
Sbjct: 232 DILQTLLDATYKDGR------PLTDDEVAGMLIGLLLAGQHTSSTTSAWMGFFLARDKTL 285
Query: 318 PKRVQGEVREVFNRK-GKVDETGIEELQFLKLVIKETLKLHPP 359
K+ E + V + +++L L IKETL+L PP
Sbjct: 286 QKKCYLEQKTVCGENLPPLTYDQLKDLNLLDRCIKETLRLRPP 328
>pdb|1PKF|A Chain A, Crystal Structure Of Epothilone D-Bound Cytochrome
P450epok
Length = 419
Score = 29.3 bits (64), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 17/65 (26%), Positives = 39/65 (60%), Gaps = 3/65 (4%)
Query: 260 DGDLVDVLLRDQENGNLQFPMTIKTIKAVIFEIFAAGTDSSAIAIDRALSEIIKNPRVPK 319
+ D++ +LL+ + +G+ ++ K + A++ I AAGTD++ I A+ ++++P +
Sbjct: 222 ENDVLTMLLQAEADGSR---LSTKELVALVGAIIAAGTDTTIYLIAFAVLNLLRSPEALE 278
Query: 320 RVQGE 324
V+ E
Sbjct: 279 LVKAE 283
>pdb|1Q5D|A Chain A, Epothilone B-Bound Cytochrome P450epok
pdb|1Q5E|A Chain A, Substrate-Free Cytochrome P450epok
Length = 419
Score = 29.3 bits (64), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 17/65 (26%), Positives = 39/65 (60%), Gaps = 3/65 (4%)
Query: 260 DGDLVDVLLRDQENGNLQFPMTIKTIKAVIFEIFAAGTDSSAIAIDRALSEIIKNPRVPK 319
+ D++ +LL+ + +G+ ++ K + A++ I AAGTD++ I A+ ++++P +
Sbjct: 222 ENDVLTMLLQAEADGSR---LSTKELVALVGAIIAAGTDTTIYLIAFAVLNLLRSPEALE 278
Query: 320 RVQGE 324
V+ E
Sbjct: 279 LVKAE 283
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 28.9 bits (63), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 35/82 (42%), Gaps = 4/82 (4%)
Query: 326 REVFNRKGKVDETGIEELQFLKLVIKETLKLHPPGSLDPKYWTEPESFILERFPDSS--I 383
R++ R V E + ++ L KE G L P WT PE+ F S
Sbjct: 132 RDLAARNVLVSEDNVAKVSDFGLT-KEASSTQDTGKL-PVKWTAPEALREAAFSTKSDVW 189
Query: 384 NFQVNNFEYIAFGSVPILRFPL 405
+F + +E +FG VP R PL
Sbjct: 190 SFGILLWEIYSFGRVPYPRIPL 211
>pdb|3AQ1|B Chain B, Open State Monomer Of A Group Ii Chaperonin From
Methanococcoides Burtonii
Length = 500
Score = 28.9 bits (63), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 24/94 (25%), Positives = 45/94 (47%), Gaps = 4/94 (4%)
Query: 197 FLKIAFLAAAGSNTADLFPSIKFLQLIAGVKSQVEKIHQQADKIISNIIEERETRLKTGK 256
+KIA A G + L + A V+S VE ++ D + N++E + + G
Sbjct: 104 LIKIAGTAITGKGAEAYKEKLSALTVKA-VRSIVE---EEEDGLKVNVLENIKIEKRAGG 159
Query: 257 SEEDGDLVDVLLRDQENGNLQFPMTIKTIKAVIF 290
S +D +L+D L+ D+E + P ++ K ++
Sbjct: 160 SIDDSELIDGLVIDKERSHPNMPEKVENAKILLL 193
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.321 0.138 0.400
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 12,397,454
Number of Sequences: 62578
Number of extensions: 499235
Number of successful extensions: 1416
Number of sequences better than 100.0: 104
Number of HSP's better than 100.0 without gapping: 40
Number of HSP's successfully gapped in prelim test: 64
Number of HSP's that attempted gapping in prelim test: 1326
Number of HSP's gapped (non-prelim): 120
length of query: 434
length of database: 14,973,337
effective HSP length: 102
effective length of query: 332
effective length of database: 8,590,381
effective search space: 2852006492
effective search space used: 2852006492
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 53 (25.0 bits)