Query 039650
Match_columns 391
No_of_seqs 189 out of 2832
Neff 11.2
Searched_HMMs 13730
Date Mon Mar 25 20:26:56 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/039650.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/039650hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d2omza2 c.10.2.1 (A:33-416) In 99.9 5.7E-25 4.1E-29 195.9 32.5 329 18-373 41-383 (384)
2 d2omza2 c.10.2.1 (A:33-416) In 99.9 2.6E-24 1.9E-28 191.5 32.7 317 42-390 41-376 (384)
3 d1ogqa_ c.10.2.8 (A:) Polygala 99.9 1.6E-24 1.2E-28 187.1 13.6 249 46-302 51-303 (313)
4 d1xkua_ c.10.2.7 (A:) Decorin 99.9 2.9E-22 2.1E-26 172.2 26.6 243 22-279 11-255 (305)
5 d1ogqa_ c.10.2.8 (A:) Polygala 99.9 9E-24 6.6E-28 182.4 15.4 247 71-325 52-302 (313)
6 d1xkua_ c.10.2.7 (A:) Decorin 99.9 8.7E-22 6.3E-26 169.2 25.1 267 46-376 11-285 (305)
7 d1ozna_ c.10.2.7 (A:) Reticulo 99.9 1.9E-21 1.4E-25 165.1 20.2 140 189-328 100-239 (284)
8 d1ozna_ c.10.2.7 (A:) Reticulo 99.9 1.2E-21 8.6E-26 166.4 16.5 238 146-385 32-270 (284)
9 d1p9ag_ c.10.2.7 (G:) von Will 99.8 1.7E-19 1.2E-23 151.2 19.8 132 145-278 76-207 (266)
10 d1p9ag_ c.10.2.7 (G:) von Will 99.8 1.2E-19 8.7E-24 152.2 17.9 202 143-352 7-208 (266)
11 d1z7xw1 c.10.1.1 (W:1-460) Rib 99.8 6.2E-22 4.5E-26 180.1 0.0 379 1-380 6-443 (460)
12 d1jl5a_ c.10.2.6 (A:) Leucine 99.8 3.4E-16 2.5E-20 136.7 29.9 313 21-390 38-350 (353)
13 d1h6ua2 c.10.2.1 (A:36-262) In 99.7 1.8E-16 1.3E-20 129.2 18.6 188 42-274 38-225 (227)
14 d1z7xw1 c.10.1.1 (W:1-460) Rib 99.7 8.3E-20 6.1E-24 165.9 -2.4 354 21-379 2-413 (460)
15 d1h6ua2 c.10.2.1 (A:36-262) In 99.7 6E-16 4.3E-20 126.2 18.7 188 144-372 39-226 (227)
16 d1jl5a_ c.10.2.6 (A:) Leucine 99.7 4.5E-14 3.3E-18 123.0 28.8 291 45-389 38-329 (353)
17 d1xwdc1 c.10.2.7 (C:18-259) Fo 99.7 1.5E-15 1.1E-19 125.2 16.5 215 24-271 11-230 (242)
18 d2omxa2 c.10.2.1 (A:37-235) In 99.7 2.9E-15 2.1E-19 119.2 17.5 95 144-246 104-198 (199)
19 d2astb2 c.10.1.3 (B:2136-2419) 99.7 4E-17 2.9E-21 137.7 6.3 234 147-386 24-269 (284)
20 d1xwdc1 c.10.2.7 (C:18-259) Fo 99.6 8.4E-16 6.1E-20 126.7 13.7 219 149-372 11-234 (242)
21 d1h6ta2 c.10.2.1 (A:31-240) In 99.6 3E-15 2.2E-19 120.1 16.4 98 145-250 111-208 (210)
22 d2omxa2 c.10.2.1 (A:37-235) In 99.6 2.4E-15 1.8E-19 119.7 14.4 159 217-390 39-197 (199)
23 d1h6ta2 c.10.2.1 (A:31-240) In 99.6 4.3E-15 3.1E-19 119.2 15.7 178 5-227 32-209 (210)
24 d2astb2 c.10.1.3 (B:2136-2419) 99.6 1.3E-15 9.7E-20 128.2 10.7 239 149-390 3-252 (284)
25 d2ca6a1 c.10.1.2 (A:2-345) Rna 99.6 7.7E-16 5.6E-20 133.9 6.7 239 139-377 24-316 (344)
26 d1w8aa_ c.10.2.7 (A:) Slit {Fr 99.6 9.5E-15 7E-19 115.4 12.4 172 197-377 11-184 (192)
27 d2ca6a1 c.10.1.2 (A:2-345) Rna 99.6 2.4E-15 1.7E-19 130.7 9.5 138 216-353 156-316 (344)
28 d1w8aa_ c.10.2.7 (A:) Slit {Fr 99.5 1.1E-14 7.9E-19 115.1 7.8 162 220-386 10-172 (192)
29 d1a9na_ c.10.2.4 (A:) Spliceso 99.5 7.5E-14 5.5E-18 106.4 8.9 110 215-327 15-125 (162)
30 d1dcea3 c.10.2.2 (A:444-567) R 99.5 1.3E-13 9.5E-18 99.9 9.4 102 1-107 2-104 (124)
31 d1a9na_ c.10.2.4 (A:) Spliceso 99.4 3.4E-13 2.5E-17 102.7 11.0 109 240-352 16-125 (162)
32 d1dcea3 c.10.2.2 (A:444-567) R 99.4 2E-12 1.4E-16 93.5 11.6 86 239-327 17-103 (124)
33 d1m9la_ c.10.3.1 (A:) Outer ar 99.2 1.6E-12 1.2E-16 102.5 0.3 111 236-352 42-153 (198)
34 d1m9la_ c.10.3.1 (A:) Outer ar 99.1 3E-12 2.2E-16 100.9 0.8 112 212-328 42-154 (198)
35 d2ifga3 c.10.2.7 (A:36-191) Hi 99.1 4.8E-10 3.5E-14 84.3 11.9 89 238-327 27-116 (156)
36 d2ifga3 c.10.2.7 (A:36-191) Hi 99.1 9.1E-11 6.6E-15 88.4 6.7 108 242-352 8-116 (156)
37 d1koha1 c.10.2.3 (A:201-362) m 98.3 4.5E-08 3.3E-12 73.8 -0.3 83 286-369 61-152 (162)
38 d1pgva_ c.10.1.1 (A:) Tropomod 98.3 9.1E-07 6.6E-11 66.8 6.9 85 289-373 43-141 (167)
39 d1koha1 c.10.2.3 (A:201-362) m 98.1 2.8E-07 2E-11 69.3 1.1 65 18-82 62-128 (162)
40 d1pgva_ c.10.1.1 (A:) Tropomod 97.9 6.2E-06 4.5E-10 62.0 5.6 90 287-376 12-113 (167)
41 d1io0a_ c.10.1.1 (A:) Tropomod 97.8 9.7E-06 7E-10 60.9 5.3 86 288-373 44-142 (166)
42 d1io0a_ c.10.1.1 (A:) Tropomod 97.5 4.4E-05 3.2E-09 57.2 5.1 87 263-349 43-142 (166)
No 1
>d2omza2 c.10.2.1 (A:33-416) Internalin A {Listeria monocytogenes [TaxId: 1639]}
Probab=99.95 E-value=5.7e-25 Score=195.85 Aligned_cols=329 Identities=29% Similarity=0.341 Sum_probs=211.8
Q ss_pred hcCCcccEEeecCCcCCCCCCCCCCCCCCccEEecCCcccccCChhhhhcCCCCCEEEeeCCccCCCCcccccCCCCCce
Q 039650 18 GRLSSFNGLSLYSNFLKGSIPPSLGNLTSLSYIGISNNLLSGSIPNEVESLKSLSDLRLYNNTLKGSIPSSLGNLTNLVN 97 (391)
Q Consensus 18 ~~~~~L~~L~l~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~l~~L~~ 97 (391)
+++.+|++|+++++.+.+ + +.++.+++|++|++++|.++ .++ .+.++++|++|++++|.+.+. + .+..+++|+.
T Consensus 41 ~~l~~l~~L~l~~~~I~~-l-~gl~~L~nL~~L~Ls~N~l~-~l~-~l~~L~~L~~L~L~~n~i~~i-~-~l~~l~~L~~ 114 (384)
T d2omza2 41 TDLDQVTTLQADRLGIKS-I-DGVEYLNNLTQINFSNNQLT-DIT-PLKNLTKLVDILMNNNQIADI-T-PLANLTNLTG 114 (384)
T ss_dssp HHHTTCCEEECCSSCCCC-C-TTGGGCTTCCEEECCSSCCC-CCG-GGTTCTTCCEEECCSSCCCCC-G-GGTTCTTCCE
T ss_pred HHhCCCCEEECCCCCCCC-c-cccccCCCCCEEeCcCCcCC-CCc-cccCCcccccccccccccccc-c-cccccccccc
Confidence 467789999999998874 3 46888999999999999987 444 378899999999999988843 2 4788999999
Q ss_pred EEecccccccccchhhcccccchhhhhceeeec--------------cccccccccccccCCCCCCEEECCCCCCCCCCC
Q 039650 98 LHLHINALSGLIPDEIRNLEFLSDLIYNYLIYW--------------INALSDLIPNEIGNLKSLSDLRLDYNTLSGSIP 163 (391)
Q Consensus 98 L~l~~~~~~~~~~~~~~~l~~L~~l~l~~~~~~--------------~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~ 163 (391)
+++.++.+.+...... ...+........... ...........+.............+... ..
T Consensus 115 L~~~~~~~~~~~~~~~--~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~ 190 (384)
T d2omza2 115 LTLFNNQITDIDPLKN--LTNLNRLELSSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDISSNKVS--DI 190 (384)
T ss_dssp EECCSSCCCCCGGGTT--CTTCSEEEEEEEEECCCGGGTTCTTCSEEEEEESCCCCGGGTTCTTCCEEECCSSCCC--CC
T ss_pred cccccccccccccccc--cccccccccccccccccccccccccccccccccccchhhhhccccccccccccccccc--cc
Confidence 9998887765433221 111111100000000 00000011112222333333333333222 23
Q ss_pred CCcCCCCCccEEEcCCCcCCCCCCccccCCCcccEEEccCCCCCCCccccccCCCcccEEEccCcccccccchhhccCCC
Q 039650 164 YSFGNLTKLVTLYLDTNALSGSIPDEIRNLKSLFNLQLDNNTLSGSIPLSLGNLTNLTTLYFSMNALSGSIPNEITNLRS 243 (391)
Q Consensus 164 ~~~~~~~~L~~L~l~~~~~~~~~~~~l~~~~~L~~L~l~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~ 243 (391)
.....+++++.+.+.++.+....+ ...+++|+.+++++|.+.+. ..+..+++|+.+++.+|.+.... .+..+++
T Consensus 191 ~~~~~l~~~~~l~l~~n~i~~~~~--~~~~~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~l~~n~l~~~~--~~~~~~~ 264 (384)
T d2omza2 191 SVLAKLTNLESLIATNNQISDITP--LGILTNLDELSLNGNQLKDI--GTLASLTNLTDLDLANNQISNLA--PLSGLTK 264 (384)
T ss_dssp GGGGGCTTCSEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCCCG--GGTTCTT
T ss_pred cccccccccceeeccCCccCCCCc--ccccCCCCEEECCCCCCCCc--chhhcccccchhccccCccCCCC--ccccccc
Confidence 345566777888887777664322 45567788888888776632 34667778888888877765332 3566778
Q ss_pred CCEEEcCCCcccCccCccccCCCCccEEEccCCccccccccccccCCcccEEEcCCCccCchhhHhhhCCCCccEEEcCC
Q 039650 244 LSDLQLSENTLNGSIPLALGNLTKLVVLYLSINKLSGSISLSYASLTSLTNLYLYENSLCDSIQKEIGDMKSLSILDLSS 323 (391)
Q Consensus 244 L~~L~l~~~~~~~~~~~~~~~~~~L~~l~l~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~L~~L~l~~ 323 (391)
|+.|+++++.+.+.. .+..++.++.+.+..|.+.+. ..+..+++++.+++++|.+.+.. .+..+++|++|++++
T Consensus 265 L~~L~l~~~~l~~~~--~~~~~~~l~~l~~~~n~l~~~--~~~~~~~~l~~L~ls~n~l~~l~--~l~~l~~L~~L~L~~ 338 (384)
T d2omza2 265 LTELKLGANQISNIS--PLAGLTALTNLELNENQLEDI--SPISNLKNLTYLTLYFNNISDIS--PVSSLTKLQRLFFAN 338 (384)
T ss_dssp CSEEECCSSCCCCCG--GGTTCTTCSEEECCSSCCSCC--GGGGGCTTCSEEECCSSCCSCCG--GGGGCTTCCEEECCS
T ss_pred CCEeeccCcccCCCC--ccccccccccccccccccccc--cccchhcccCeEECCCCCCCCCc--ccccCCCCCEEECCC
Confidence 888888877775332 356777778888887777643 23566777888888888776542 366778888888888
Q ss_pred CcccchhHHHHHHhhccccEEEcCCCcccCCCcccccCCccccEEEcccc
Q 039650 324 NKLNGSILLSLANLTNSLKVLYLSSNHIVGEIPLGHGKFSSLIQLILTNN 373 (391)
Q Consensus 324 ~~i~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~L~~L~l~~~ 373 (391)
|++++ . ..+..++ +|++|++++|++++..+ +.++++|+.|++++|
T Consensus 339 n~l~~-l-~~l~~l~-~L~~L~l~~N~l~~l~~--l~~l~~L~~L~L~~N 383 (384)
T d2omza2 339 NKVSD-V-SSLANLT-NINWLSAGHNQISDLTP--LANLTRITQLGLNDQ 383 (384)
T ss_dssp SCCCC-C-GGGGGCT-TCCEEECCSSCCCBCGG--GTTCTTCSEEECCCE
T ss_pred CCCCC-C-hhHcCCC-CCCEEECCCCcCCCChh--hccCCCCCEeeCCCC
Confidence 87764 2 2455544 78888888887774332 677788888888776
No 2
>d2omza2 c.10.2.1 (A:33-416) Internalin A {Listeria monocytogenes [TaxId: 1639]}
Probab=99.94 E-value=2.6e-24 Score=191.52 Aligned_cols=317 Identities=31% Similarity=0.431 Sum_probs=228.9
Q ss_pred CCCCCccEEecCCcccccCChhhhhcCCCCCEEEeeCCccCCCCcccccCCCCCceEEecccccccccchhhcccccchh
Q 039650 42 GNLTSLSYIGISNNLLSGSIPNEVESLKSLSDLRLYNNTLKGSIPSSLGNLTNLVNLHLHINALSGLIPDEIRNLEFLSD 121 (391)
Q Consensus 42 ~~~~~L~~L~l~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~l~~L~~L~l~~~~~~~~~~~~~~~l~~L~~ 121 (391)
..+.+|++|+++++.+. .+ ..+..+++|++|++++|++++ ++ .+..+++|++|++++|.+.... .++.+++|+.
T Consensus 41 ~~l~~l~~L~l~~~~I~-~l-~gl~~L~nL~~L~Ls~N~l~~-l~-~l~~L~~L~~L~L~~n~i~~i~--~l~~l~~L~~ 114 (384)
T d2omza2 41 TDLDQVTTLQADRLGIK-SI-DGVEYLNNLTQINFSNNQLTD-IT-PLKNLTKLVDILMNNNQIADIT--PLANLTNLTG 114 (384)
T ss_dssp HHHTTCCEEECCSSCCC-CC-TTGGGCTTCCEEECCSSCCCC-CG-GGTTCTTCCEEECCSSCCCCCG--GGTTCTTCCE
T ss_pred HHhCCCCEEECCCCCCC-Cc-cccccCCCCCEEeCcCCcCCC-Cc-cccCCccccccccccccccccc--cccccccccc
Confidence 45678999999999887 34 457889999999999999984 33 3899999999999999998653 3777888874
Q ss_pred hhhceeeeccccccccccccccCCCCCCEEECCCCCCCCC-------------------CCCCcCCCCCccEEEcCCCcC
Q 039650 122 LIYNYLIYWINALSDLIPNEIGNLKSLSDLRLDYNTLSGS-------------------IPYSFGNLTKLVTLYLDTNAL 182 (391)
Q Consensus 122 l~l~~~~~~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~-------------------~~~~~~~~~~L~~L~l~~~~~ 182 (391)
+.+ ..+....... ......+.......+.+... ....+.............+..
T Consensus 115 L~~-----~~~~~~~~~~--~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (384)
T d2omza2 115 LTL-----FNNQITDIDP--LKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDISSNKV 187 (384)
T ss_dssp EEC-----CSSCCCCCGG--GTTCTTCSEEEEEEEEECCCGGGTTCTTCSEEEEEESCCCCGGGTTCTTCCEEECCSSCC
T ss_pred ccc-----cccccccccc--ccccccccccccccccccccccccccccccccccccccchhhhhcccccccccccccccc
Confidence 433 3333333222 12223444443332221111 111122223333333333332
Q ss_pred CCCCCccccCCCcccEEEccCCCCCCCccccccCCCcccEEEccCcccccccchhhccCCCCCEEEcCCCcccCccCccc
Q 039650 183 SGSIPDEIRNLKSLFNLQLDNNTLSGSIPLSLGNLTNLTTLYFSMNALSGSIPNEITNLRSLSDLQLSENTLNGSIPLAL 262 (391)
Q Consensus 183 ~~~~~~~l~~~~~L~~L~l~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~ 262 (391)
........+++++.++++++.+....+ ....++|+.+++.+|.++.. ..+..+++|+.+++++|.+.+.. .+
T Consensus 188 --~~~~~~~~l~~~~~l~l~~n~i~~~~~--~~~~~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~l~~n~l~~~~--~~ 259 (384)
T d2omza2 188 --SDISVLAKLTNLESLIATNNQISDITP--LGILTNLDELSLNGNQLKDI--GTLASLTNLTDLDLANNQISNLA--PL 259 (384)
T ss_dssp --CCCGGGGGCTTCSEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCCCG--GG
T ss_pred --ccccccccccccceeeccCCccCCCCc--ccccCCCCEEECCCCCCCCc--chhhcccccchhccccCccCCCC--cc
Confidence 233456778899999999998875433 46678999999999988743 46778899999999999987543 37
Q ss_pred cCCCCccEEEccCCccccccccccccCCcccEEEcCCCccCchhhHhhhCCCCccEEEcCCCcccchhHHHHHHhhcccc
Q 039650 263 GNLTKLVVLYLSINKLSGSISLSYASLTSLTNLYLYENSLCDSIQKEIGDMKSLSILDLSSNKLNGSILLSLANLTNSLK 342 (391)
Q Consensus 263 ~~~~~L~~l~l~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~L~~L~l~~~~i~~~~~~~~~~~~~~L~ 342 (391)
..+++|++++++++.+.+.. .+..++.++.+.++.|.+... ..+..+++++.+++++|++++.. .+..++ +|+
T Consensus 260 ~~~~~L~~L~l~~~~l~~~~--~~~~~~~l~~l~~~~n~l~~~--~~~~~~~~l~~L~ls~n~l~~l~--~l~~l~-~L~ 332 (384)
T d2omza2 260 SGLTKLTELKLGANQISNIS--PLAGLTALTNLELNENQLEDI--SPISNLKNLTYLTLYFNNISDIS--PVSSLT-KLQ 332 (384)
T ss_dssp TTCTTCSEEECCSSCCCCCG--GGTTCTTCSEEECCSSCCSCC--GGGGGCTTCSEEECCSSCCSCCG--GGGGCT-TCC
T ss_pred cccccCCEeeccCcccCCCC--ccccccccccccccccccccc--cccchhcccCeEECCCCCCCCCc--ccccCC-CCC
Confidence 78999999999999987543 356788999999999998653 34778999999999999998643 255554 999
Q ss_pred EEEcCCCcccCCCcccccCCccccEEEccccccccCCCccccccCCCc
Q 039650 343 VLYLSSNHIVGEIPLGHGKFSSLIQLILTNNELSGQLSPELGSLIQLE 390 (391)
Q Consensus 343 ~L~l~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~L~ 390 (391)
+|++++|++++ ++ .+..+++|++|++++|++++..| ++++++|+
T Consensus 333 ~L~L~~n~l~~-l~-~l~~l~~L~~L~l~~N~l~~l~~--l~~l~~L~ 376 (384)
T d2omza2 333 RLFFANNKVSD-VS-SLANLTNINWLSAGHNQISDLTP--LANLTRIT 376 (384)
T ss_dssp EEECCSSCCCC-CG-GGGGCTTCCEEECCSSCCCBCGG--GTTCTTCS
T ss_pred EEECCCCCCCC-Ch-hHcCCCCCCEEECCCCcCCCChh--hccCCCCC
Confidence 99999999984 44 58899999999999999995444 67777776
No 3
>d1ogqa_ c.10.2.8 (A:) Polygalacturonase inhibiting protein PGIP {Kidney bean (Phaseolus vulgaris) [TaxId: 3885]}
Probab=99.91 E-value=1.6e-24 Score=187.14 Aligned_cols=249 Identities=29% Similarity=0.433 Sum_probs=175.7
Q ss_pred CccEEecCCccccc--CChhhhhcCCCCCEEEeeC-CccCCCCcccccCCCCCceEEecccccccccchhhcccccchhh
Q 039650 46 SLSYIGISNNLLSG--SIPNEVESLKSLSDLRLYN-NTLKGSIPSSLGNLTNLVNLHLHINALSGLIPDEIRNLEFLSDL 122 (391)
Q Consensus 46 ~L~~L~l~~~~~~~--~~~~~~~~~~~L~~L~l~~-~~~~~~~~~~~~~l~~L~~L~l~~~~~~~~~~~~~~~l~~L~~l 122 (391)
+++.|+++++.+.+ .+|..+.++++|++|++++ |.+.+.+|..+.++++|++|++++|.+.+..+..+..+..|+
T Consensus 51 ~v~~L~L~~~~l~g~~~lp~~l~~L~~L~~L~Ls~~N~l~g~iP~~i~~L~~L~~L~Ls~N~l~~~~~~~~~~~~~L~-- 128 (313)
T d1ogqa_ 51 RVNNLDLSGLNLPKPYPIPSSLANLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLV-- 128 (313)
T ss_dssp CEEEEEEECCCCSSCEECCGGGGGCTTCSEEEEEEETTEESCCCGGGGGCTTCSEEEEEEECCEEECCGGGGGCTTCC--
T ss_pred EEEEEECCCCCCCCCCCCChHHhcCccccccccccccccccccccccccccccchhhhccccccccccccccchhhhc--
Confidence 46666666665543 3555666666666666654 455555666666666666666666666655555566666555
Q ss_pred hhceeeeccccccccccccccCCCCCCEEECCCCCCCCCCCCCcCCCCCc-cEEEcCCCcCCCCCCccccCCCcccEEEc
Q 039650 123 IYNYLIYWINALSDLIPNEIGNLKSLSDLRLDYNTLSGSIPYSFGNLTKL-VTLYLDTNALSGSIPDEIRNLKSLFNLQL 201 (391)
Q Consensus 123 ~l~~~~~~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~L-~~L~l~~~~~~~~~~~~l~~~~~L~~L~l 201 (391)
.+....+.....++..++++++++.++++++.+.+..|..+..+..+ +.+.+..|.+....+..+..+..+ .+++
T Consensus 129 ---~l~l~~N~~~~~~p~~l~~l~~L~~l~l~~n~l~~~ip~~~~~l~~l~~~l~~~~n~l~~~~~~~~~~l~~~-~l~l 204 (313)
T d1ogqa_ 129 ---TLDFSYNALSGTLPPSISSLPNLVGITFDGNRISGAIPDSYGSFSKLFTSMTISRNRLTGKIPPTFANLNLA-FVDL 204 (313)
T ss_dssp ---EEECCSSEEESCCCGGGGGCTTCCEEECCSSCCEEECCGGGGCCCTTCCEEECCSSEEEEECCGGGGGCCCS-EEEC
T ss_pred ---ccccccccccccCchhhccCcccceeeccccccccccccccccccccccccccccccccccccccccccccc-cccc
Confidence 33333445555666777888888888888888876677777676665 778888888776556666555443 6888
Q ss_pred cCCCCCCCccccccCCCcccEEEccCcccccccchhhccCCCCCEEEcCCCcccCccCccccCCCCccEEEccCCccccc
Q 039650 202 DNNTLSGSIPLSLGNLTNLTTLYFSMNALSGSIPNEITNLRSLSDLQLSENTLNGSIPLALGNLTKLVVLYLSINKLSGS 281 (391)
Q Consensus 202 ~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~L~~l~l~~~~~~~~ 281 (391)
..+......+..+...++++.+++.++.+... +..+..+++|+.|++++|.+.+..|..+..+++|++|++++|.+.+.
T Consensus 205 ~~~~~~~~~~~~~~~~~~l~~l~~~~~~l~~~-~~~~~~~~~L~~L~Ls~N~l~g~iP~~l~~L~~L~~L~Ls~N~l~g~ 283 (313)
T d1ogqa_ 205 SRNMLEGDASVLFGSDKNTQKIHLAKNSLAFD-LGKVGLSKNLNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCGE 283 (313)
T ss_dssp CSSEEEECCGGGCCTTSCCSEEECCSSEECCB-GGGCCCCTTCCEEECCSSCCEECCCGGGGGCTTCCEEECCSSEEEEE
T ss_pred cccccccccccccccccccccccccccccccc-ccccccccccccccCccCeecccCChHHhCCCCCCEEECcCCccccc
Confidence 77776656666777788899999988887644 34567788999999999988877888888899999999999988865
Q ss_pred cccccccCCcccEEEcCCCcc
Q 039650 282 ISLSYASLTSLTNLYLYENSL 302 (391)
Q Consensus 282 ~~~~~~~~~~L~~L~l~~~~~ 302 (391)
.+. +..+++|+.+++++|+.
T Consensus 284 iP~-~~~L~~L~~l~l~~N~~ 303 (313)
T d1ogqa_ 284 IPQ-GGNLQRFDVSAYANNKC 303 (313)
T ss_dssp CCC-STTGGGSCGGGTCSSSE
T ss_pred CCC-cccCCCCCHHHhCCCcc
Confidence 553 45678888888888874
No 4
>d1xkua_ c.10.2.7 (A:) Decorin {Cow (Bos taurus) [TaxId: 9913]}
Probab=99.91 E-value=2.9e-22 Score=172.17 Aligned_cols=243 Identities=25% Similarity=0.317 Sum_probs=120.3
Q ss_pred cccEEeecCCcCCCCCCCCCCCCCCccEEecCCcccccCChhhhhcCCCCCEEEeeCCccCCCCcccccCCCCCceEEec
Q 039650 22 SFNGLSLYSNFLKGSIPPSLGNLTSLSYIGISNNLLSGSIPNEVESLKSLSDLRLYNNTLKGSIPSSLGNLTNLVNLHLH 101 (391)
Q Consensus 22 ~L~~L~l~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~l~~L~~L~l~ 101 (391)
..+.++-++..++ ..|..+. +++++|++++|.++...+..+.++++|++|++++|.+....+.+|..+++|++++++
T Consensus 11 ~~~~~~C~~~~L~-~lP~~l~--~~l~~L~Ls~N~i~~l~~~~f~~l~~L~~L~l~~n~~~~i~~~~f~~l~~L~~L~l~ 87 (305)
T d1xkua_ 11 HLRVVQCSDLGLE-KVPKDLP--PDTALLDLQNNKITEIKDGDFKNLKNLHTLILINNKISKISPGAFAPLVKLERLYLS 87 (305)
T ss_dssp ETTEEECTTSCCC-SCCCSCC--TTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECC
T ss_pred cCCEEEecCCCCC-ccCCCCC--CCCCEEECcCCcCCCcChhHhhccccccccccccccccccchhhhhCCCccCEeccc
Confidence 4455665665565 3444442 467777777777763333456677777777777777775556667777777777777
Q ss_pred ccccccccchhhcccccchhhhhceeeeccccccccccccccCCCCCCEEECCCCCCC--CCCCCCcCCCCCccEEEcCC
Q 039650 102 INALSGLIPDEIRNLEFLSDLIYNYLIYWINALSDLIPNEIGNLKSLSDLRLDYNTLS--GSIPYSFGNLTKLVTLYLDT 179 (391)
Q Consensus 102 ~~~~~~~~~~~~~~l~~L~~l~l~~~~~~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~--~~~~~~~~~~~~L~~L~l~~ 179 (391)
+|+++......+..+. .+....+.+.......+.....+..++...+... ......+..+++|+.+++.+
T Consensus 88 ~n~l~~l~~~~~~~l~--------~L~~~~n~l~~l~~~~~~~~~~~~~l~~~~n~~~~~~~~~~~~~~l~~L~~l~l~~ 159 (305)
T d1xkua_ 88 KNQLKELPEKMPKTLQ--------ELRVHENEITKVRKSVFNGLNQMIVVELGTNPLKSSGIENGAFQGMKKLSYIRIAD 159 (305)
T ss_dssp SSCCSBCCSSCCTTCC--------EEECCSSCCCBBCHHHHTTCTTCCEEECCSSCCCGGGBCTTGGGGCTTCCEEECCS
T ss_pred CCccCcCccchhhhhh--------hhhccccchhhhhhhhhhccccccccccccccccccCCCccccccccccCcccccc
Confidence 7776643222211111 1111222233333333444444455554443221 11222344445555555555
Q ss_pred CcCCCCCCccccCCCcccEEEccCCCCCCCccccccCCCcccEEEccCcccccccchhhccCCCCCEEEcCCCcccCccC
Q 039650 180 NALSGSIPDEIRNLKSLFNLQLDNNTLSGSIPLSLGNLTNLTTLYFSMNALSGSIPNEITNLRSLSDLQLSENTLNGSIP 259 (391)
Q Consensus 180 ~~~~~~~~~~l~~~~~L~~L~l~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~ 259 (391)
+.+... +.. .+++++.|+++++......+..+..++.++.|++++|.+....+.++..+++|+.|++++|.+. ..+
T Consensus 160 n~l~~l-~~~--~~~~L~~L~l~~n~~~~~~~~~~~~~~~l~~L~~s~n~l~~~~~~~~~~l~~L~~L~L~~N~L~-~lp 235 (305)
T d1xkua_ 160 TNITTI-PQG--LPPSLTELHLDGNKITKVDAASLKGLNNLAKLGLSFNSISAVDNGSLANTPHLRELHLNNNKLV-KVP 235 (305)
T ss_dssp SCCCSC-CSS--CCTTCSEEECTTSCCCEECTGGGTTCTTCCEEECCSSCCCEECTTTGGGSTTCCEEECCSSCCS-SCC
T ss_pred CCcccc-Ccc--cCCccCEEECCCCcCCCCChhHhhccccccccccccccccccccccccccccceeeeccccccc-ccc
Confidence 544321 111 1344555555554444333334444445555555555444444444444555555555555444 223
Q ss_pred ccccCCCCccEEEccCCccc
Q 039650 260 LALGNLTKLVVLYLSINKLS 279 (391)
Q Consensus 260 ~~~~~~~~L~~l~l~~~~~~ 279 (391)
..+..+++|++|++++|+++
T Consensus 236 ~~l~~l~~L~~L~Ls~N~i~ 255 (305)
T d1xkua_ 236 GGLADHKYIQVVYLHNNNIS 255 (305)
T ss_dssp TTTTTCSSCCEEECCSSCCC
T ss_pred cccccccCCCEEECCCCccC
Confidence 34444555555555555444
No 5
>d1ogqa_ c.10.2.8 (A:) Polygalacturonase inhibiting protein PGIP {Kidney bean (Phaseolus vulgaris) [TaxId: 3885]}
Probab=99.90 E-value=9e-24 Score=182.37 Aligned_cols=247 Identities=31% Similarity=0.465 Sum_probs=106.6
Q ss_pred CCEEEeeCCccCC--CCcccccCCCCCceEEecc-cccccccchhhcccccchhhhhceeeeccccccccccccccCCCC
Q 039650 71 LSDLRLYNNTLKG--SIPSSLGNLTNLVNLHLHI-NALSGLIPDEIRNLEFLSDLIYNYLIYWINALSDLIPNEIGNLKS 147 (391)
Q Consensus 71 L~~L~l~~~~~~~--~~~~~~~~l~~L~~L~l~~-~~~~~~~~~~~~~l~~L~~l~l~~~~~~~~~~~~~~~~~~~~~~~ 147 (391)
++.|+++++.+.+ .+|..+.++++|++|++++ +.+.+..|..+.++++|+ .+.+..+.+....+..+..+.+
T Consensus 52 v~~L~L~~~~l~g~~~lp~~l~~L~~L~~L~Ls~~N~l~g~iP~~i~~L~~L~-----~L~Ls~N~l~~~~~~~~~~~~~ 126 (313)
T d1ogqa_ 52 VNNLDLSGLNLPKPYPIPSSLANLPYLNFLYIGGINNLVGPIPPAIAKLTQLH-----YLYITHTNVSGAIPDFLSQIKT 126 (313)
T ss_dssp EEEEEEECCCCSSCEECCGGGGGCTTCSEEEEEEETTEESCCCGGGGGCTTCS-----EEEEEEECCEEECCGGGGGCTT
T ss_pred EEEEECCCCCCCCCCCCChHHhcCccccccccccccccccccccccccccccc-----hhhhccccccccccccccchhh
Confidence 4444444444443 2344444455555555543 344444444444444444 2222233333344444444444
Q ss_pred CCEEECCCCCCCCCCCCCcCCCCCccEEEcCCCcCCCCCCccccCCCcc-cEEEccCCCCCCCccccccCCCcccEEEcc
Q 039650 148 LSDLRLDYNTLSGSIPYSFGNLTKLVTLYLDTNALSGSIPDEIRNLKSL-FNLQLDNNTLSGSIPLSLGNLTNLTTLYFS 226 (391)
Q Consensus 148 L~~L~l~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~l~~~~~L-~~L~l~~~~~~~~~~~~~~~~~~L~~L~l~ 226 (391)
|+.++++++.+....|..+..++.++.+++.+|.+....+..+..+..+ +.++++.+.+....+..+..+. ...+++.
T Consensus 127 L~~l~l~~N~~~~~~p~~l~~l~~L~~l~l~~n~l~~~ip~~~~~l~~l~~~l~~~~n~l~~~~~~~~~~l~-~~~l~l~ 205 (313)
T d1ogqa_ 127 LVTLDFSYNALSGTLPPSISSLPNLVGITFDGNRISGAIPDSYGSFSKLFTSMTISRNRLTGKIPPTFANLN-LAFVDLS 205 (313)
T ss_dssp CCEEECCSSEEESCCCGGGGGCTTCCEEECCSSCCEEECCGGGGCCCTTCCEEECCSSEEEEECCGGGGGCC-CSEEECC
T ss_pred hcccccccccccccCchhhccCcccceeeccccccccccccccccccccccccccccccccccccccccccc-ccccccc
Confidence 5555554444443444444444455555554444443333333333332 4444444444322222222222 2234444
Q ss_pred CcccccccchhhccCCCCCEEEcCCCcccCccCccccCCCCccEEEccCCccccccccccccCCcccEEEcCCCccCchh
Q 039650 227 MNALSGSIPNEITNLRSLSDLQLSENTLNGSIPLALGNLTKLVVLYLSINKLSGSISLSYASLTSLTNLYLYENSLCDSI 306 (391)
Q Consensus 227 ~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~L~~l~l~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~ 306 (391)
.+......+..+..++.++.++++++.+.+.++ .+..+++|+.|++++|++++..+..+..+++|++|++++|++.+..
T Consensus 206 ~~~~~~~~~~~~~~~~~l~~l~~~~~~l~~~~~-~~~~~~~L~~L~Ls~N~l~g~iP~~l~~L~~L~~L~Ls~N~l~g~i 284 (313)
T d1ogqa_ 206 RNMLEGDASVLFGSDKNTQKIHLAKNSLAFDLG-KVGLSKNLNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCGEI 284 (313)
T ss_dssp SSEEEECCGGGCCTTSCCSEEECCSSEECCBGG-GCCCCTTCCEEECCSSCCEECCCGGGGGCTTCCEEECCSSEEEEEC
T ss_pred ccccccccccccccccccccccccccccccccc-ccccccccccccCccCeecccCChHHhCCCCCCEEECcCCcccccC
Confidence 444333334444444445555554444443222 2344444555555555444444444444445555555555443222
Q ss_pred hHhhhCCCCccEEEcCCCc
Q 039650 307 QKEIGDMKSLSILDLSSNK 325 (391)
Q Consensus 307 ~~~~~~~~~L~~L~l~~~~ 325 (391)
+ .+..+++|+.+++++|+
T Consensus 285 P-~~~~L~~L~~l~l~~N~ 302 (313)
T d1ogqa_ 285 P-QGGNLQRFDVSAYANNK 302 (313)
T ss_dssp C-CSTTGGGSCGGGTCSSS
T ss_pred C-CcccCCCCCHHHhCCCc
Confidence 2 12334444444444443
No 6
>d1xkua_ c.10.2.7 (A:) Decorin {Cow (Bos taurus) [TaxId: 9913]}
Probab=99.90 E-value=8.7e-22 Score=169.19 Aligned_cols=267 Identities=23% Similarity=0.242 Sum_probs=143.8
Q ss_pred CccEEecCCcccccCChhhhhcCCCCCEEEeeCCccCCCCcccccCCCCCceEEecccccccccchhhcccccchhhhhc
Q 039650 46 SLSYIGISNNLLSGSIPNEVESLKSLSDLRLYNNTLKGSIPSSLGNLTNLVNLHLHINALSGLIPDEIRNLEFLSDLIYN 125 (391)
Q Consensus 46 ~L~~L~l~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~l~~L~~L~l~~~~~~~~~~~~~~~l~~L~~l~l~ 125 (391)
..+.++.++..++ .+|..+. +++++|++++|+++...+..|..+++|++|+++++.+...
T Consensus 11 ~~~~~~C~~~~L~-~lP~~l~--~~l~~L~Ls~N~i~~l~~~~f~~l~~L~~L~l~~n~~~~i----------------- 70 (305)
T d1xkua_ 11 HLRVVQCSDLGLE-KVPKDLP--PDTALLDLQNNKITEIKDGDFKNLKNLHTLILINNKISKI----------------- 70 (305)
T ss_dssp ETTEEECTTSCCC-SCCCSCC--TTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCCCCB-----------------
T ss_pred cCCEEEecCCCCC-ccCCCCC--CCCCEEECcCCcCCCcChhHhhcccccccccccccccccc-----------------
Confidence 4677777776666 5665542 5678888888877744445677777888888777766532
Q ss_pred eeeeccccccccccccccCCCCCCEEECCCCCCCCCCCCCcCCCCCccEEEcCCCcCCCCCCccccCCCcccEEEccCCC
Q 039650 126 YLIYWINALSDLIPNEIGNLKSLSDLRLDYNTLSGSIPYSFGNLTKLVTLYLDTNALSGSIPDEIRNLKSLFNLQLDNNT 205 (391)
Q Consensus 126 ~~~~~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~l~~~~~L~~L~l~~~~ 205 (391)
.+..|.++++|+.|++++|.++.. +..+ .+.++.+.+.++.+.......+........+....+.
T Consensus 71 ------------~~~~f~~l~~L~~L~l~~n~l~~l-~~~~--~~~l~~L~~~~n~l~~l~~~~~~~~~~~~~l~~~~n~ 135 (305)
T d1xkua_ 71 ------------SPGAFAPLVKLERLYLSKNQLKEL-PEKM--PKTLQELRVHENEITKVRKSVFNGLNQMIVVELGTNP 135 (305)
T ss_dssp ------------CTTTTTTCTTCCEEECCSSCCSBC-CSSC--CTTCCEEECCSSCCCBBCHHHHTTCTTCCEEECCSSC
T ss_pred ------------chhhhhCCCccCEecccCCccCcC-ccch--hhhhhhhhccccchhhhhhhhhhcccccccccccccc
Confidence 234456677788888888777633 3222 3466777777766664444444555555555555543
Q ss_pred CCC--CccccccCCCcccEEEccCcccccccchhhccCCCCCEEEcCCCcccCccCccccCCCCccEEEccCCccccccc
Q 039650 206 LSG--SIPLSLGNLTNLTTLYFSMNALSGSIPNEITNLRSLSDLQLSENTLNGSIPLALGNLTKLVVLYLSINKLSGSIS 283 (391)
Q Consensus 206 ~~~--~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~L~~l~l~~~~~~~~~~ 283 (391)
... .....+..+++|+.+.+.++.+... +.. .+++|+++++++|.......
T Consensus 136 ~~~~~~~~~~~~~l~~L~~l~l~~n~l~~l-------------------------~~~--~~~~L~~L~l~~n~~~~~~~ 188 (305)
T d1xkua_ 136 LKSSGIENGAFQGMKKLSYIRIADTNITTI-------------------------PQG--LPPSLTELHLDGNKITKVDA 188 (305)
T ss_dssp CCGGGBCTTGGGGCTTCCEEECCSSCCCSC-------------------------CSS--CCTTCSEEECTTSCCCEECT
T ss_pred ccccCCCccccccccccCccccccCCcccc-------------------------Ccc--cCCccCEEECCCCcCCCCCh
Confidence 221 1122333444455555554443321 111 13444555555544444444
Q ss_pred cccccCCcccEEEcCCCccCchhhHhhhCCCCccEEEcCCCcccchhHHHHHHhhccccEEEcCCCcccCCCcc------
Q 039650 284 LSYASLTSLTNLYLYENSLCDSIQKEIGDMKSLSILDLSSNKLNGSILLSLANLTNSLKVLYLSSNHIVGEIPL------ 357 (391)
Q Consensus 284 ~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~L~~L~l~~~~i~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~------ 357 (391)
..+..++.++.|++++|.+.......+.++++|++|++++|+++ .+|..+..+. +|+.|++++|+++.....
T Consensus 189 ~~~~~~~~l~~L~~s~n~l~~~~~~~~~~l~~L~~L~L~~N~L~-~lp~~l~~l~-~L~~L~Ls~N~i~~i~~~~f~~~~ 266 (305)
T d1xkua_ 189 ASLKGLNNLAKLGLSFNSISAVDNGSLANTPHLRELHLNNNKLV-KVPGGLADHK-YIQVVYLHNNNISAIGSNDFCPPG 266 (305)
T ss_dssp GGGTTCTTCCEEECCSSCCCEECTTTGGGSTTCCEEECCSSCCS-SCCTTTTTCS-SCCEEECCSSCCCCCCTTSSSCSS
T ss_pred hHhhccccccccccccccccccccccccccccceeeeccccccc-cccccccccc-CCCEEECCCCccCccChhhccCcc
Confidence 44444455555555555554444444455555555555555554 2333443333 555555555555532211
Q ss_pred cccCCccccEEEccccccc
Q 039650 358 GHGKFSSLIQLILTNNELS 376 (391)
Q Consensus 358 ~~~~~~~L~~L~l~~~~~~ 376 (391)
.....++|+.|++++|++.
T Consensus 267 ~~~~~~~L~~L~L~~N~~~ 285 (305)
T d1xkua_ 267 YNTKKASYSGVSLFSNPVQ 285 (305)
T ss_dssp CCTTSCCCSEEECCSSSSC
T ss_pred hhcccCCCCEEECCCCcCc
Confidence 2234556666666666653
No 7
>d1ozna_ c.10.2.7 (A:) Reticulon 4 receptor (Nogo-66 receptor, Ngr) {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.88 E-value=1.9e-21 Score=165.06 Aligned_cols=140 Identities=26% Similarity=0.329 Sum_probs=90.6
Q ss_pred cccCCCcccEEEccCCCCCCCccccccCCCcccEEEccCcccccccchhhccCCCCCEEEcCCCcccCccCccccCCCCc
Q 039650 189 EIRNLKSLFNLQLDNNTLSGSIPLSLGNLTNLTTLYFSMNALSGSIPNEITNLRSLSDLQLSENTLNGSIPLALGNLTKL 268 (391)
Q Consensus 189 ~l~~~~~L~~L~l~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~L 268 (391)
.++.+++|+.|+++.+.+.......+...++|+.+++.+|.++...+..|..+++|+.|++++|.+....+..+..+++|
T Consensus 100 ~~~~l~~L~~L~l~~n~~~~~~~~~~~~~~~L~~l~l~~N~l~~i~~~~f~~~~~L~~L~l~~N~l~~l~~~~f~~l~~L 179 (284)
T d1ozna_ 100 TFHGLGRLHTLHLDRCGLQELGPGLFRGLAALQYLYLQDNALQALPDDTFRDLGNLTHLFLHGNRISSVPERAFRGLHSL 179 (284)
T ss_dssp TTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTC
T ss_pred hhcccccCCEEecCCcccccccccccchhcccchhhhccccccccChhHhccccchhhcccccCcccccchhhhcccccc
Confidence 34444444444444444432333334444555555555555554445556666677777777777665556667777777
Q ss_pred cEEEccCCccccccccccccCCcccEEEcCCCccCchhhHhhhCCCCccEEEcCCCcccc
Q 039650 269 VVLYLSINKLSGSISLSYASLTSLTNLYLYENSLCDSIQKEIGDMKSLSILDLSSNKLNG 328 (391)
Q Consensus 269 ~~l~l~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~L~~L~l~~~~i~~ 328 (391)
+.+++++|.+.+..+..+..+++|+.|++++|.+....+..+..+++|+.+++++|++..
T Consensus 180 ~~l~l~~N~l~~i~~~~f~~l~~L~~L~l~~N~i~~~~~~~~~~~~~L~~L~l~~N~l~C 239 (284)
T d1ozna_ 180 DRLLLHQNRVAHVHPHAFRDLGRLMTLYLFANNLSALPTEALAPLRALQYLRLNDNPWVC 239 (284)
T ss_dssp CEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSCCCHHHHTTCTTCCEEECCSSCEEC
T ss_pred chhhhhhccccccChhHhhhhhhcccccccccccccccccccccccccCEEEecCCCCCC
Confidence 777777777776666777777778888888877777777777777888888888877663
No 8
>d1ozna_ c.10.2.7 (A:) Reticulon 4 receptor (Nogo-66 receptor, Ngr) {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.87 E-value=1.2e-21 Score=166.42 Aligned_cols=238 Identities=24% Similarity=0.258 Sum_probs=192.2
Q ss_pred CCCCEEECCCCCCCCCCCCCcCCCCCccEEEcCCCcCCCCCCccccCCCcccEEEccC-CCCCCCccccccCCCcccEEE
Q 039650 146 KSLSDLRLDYNTLSGSIPYSFGNLTKLVTLYLDTNALSGSIPDEIRNLKSLFNLQLDN-NTLSGSIPLSLGNLTNLTTLY 224 (391)
Q Consensus 146 ~~L~~L~l~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~l~~~~~L~~L~l~~-~~~~~~~~~~~~~~~~L~~L~ 224 (391)
+.+++|++++|.++...+..|..+++|+.++++++.+....+..+..+..+..+.... +.+....+..+.++++|+.++
T Consensus 32 ~~~~~L~Ls~N~i~~i~~~~f~~l~~L~~L~ls~n~l~~i~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~l~~L~~L~ 111 (284)
T d1ozna_ 32 AASQRIFLHGNRISHVPAASFRACRNLTILWLHSNVLARIDAAAFTGLALLEQLDLSDNAQLRSVDPATFHGLGRLHTLH 111 (284)
T ss_dssp TTCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSCTTCCCCCTTTTTTCTTCCEEE
T ss_pred CCCCEEECcCCcCCCCCHHHhhccccccccccccccccccccccccccccccccccccccccccccchhhcccccCCEEe
Confidence 5789999999999866667899999999999999998876677777888888887654 445544566788899999999
Q ss_pred ccCcccccccchhhccCCCCCEEEcCCCcccCccCccccCCCCccEEEccCCccccccccccccCCcccEEEcCCCccCc
Q 039650 225 FSMNALSGSIPNEITNLRSLSDLQLSENTLNGSIPLALGNLTKLVVLYLSINKLSGSISLSYASLTSLTNLYLYENSLCD 304 (391)
Q Consensus 225 l~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~L~~l~l~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~ 304 (391)
+++|.+.......+...++|+.++++++.+++..+..+..+++|++|++++|.+.......+.++++|+.+++++|.+..
T Consensus 112 l~~n~~~~~~~~~~~~~~~L~~l~l~~N~l~~i~~~~f~~~~~L~~L~l~~N~l~~l~~~~f~~l~~L~~l~l~~N~l~~ 191 (284)
T d1ozna_ 112 LDRCGLQELGPGLFRGLAALQYLYLQDNALQALPDDTFRDLGNLTHLFLHGNRISSVPERAFRGLHSLDRLLLHQNRVAH 191 (284)
T ss_dssp CTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCE
T ss_pred cCCcccccccccccchhcccchhhhccccccccChhHhccccchhhcccccCcccccchhhhccccccchhhhhhccccc
Confidence 99998876777778888999999999999987777888899999999999999987778888899999999999999988
Q ss_pred hhhHhhhCCCCccEEEcCCCcccchhHHHHHHhhccccEEEcCCCcccCCCcccccCCccccEEEccccccccCCCcccc
Q 039650 305 SIQKEIGDMKSLSILDLSSNKLNGSILLSLANLTNSLKVLYLSSNHIVGEIPLGHGKFSSLIQLILTNNELSGQLSPELG 384 (391)
Q Consensus 305 ~~~~~~~~~~~L~~L~l~~~~i~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~ 384 (391)
..+..|..+++|+.|++++|++.+..+..+..+. +|++|++++|++.-.- ...+-...+++.....+.+.+..|..+.
T Consensus 192 i~~~~f~~l~~L~~L~l~~N~i~~~~~~~~~~~~-~L~~L~l~~N~l~C~C-~~~~l~~~l~~~~~~~~~~~C~~p~~l~ 269 (284)
T d1ozna_ 192 VHPHAFRDLGRLMTLYLFANNLSALPTEALAPLR-ALQYLRLNDNPWVCDC-RARPLWAWLQKFRGSSSEVPCSLPQRLA 269 (284)
T ss_dssp ECTTTTTTCTTCCEEECCSSCCSCCCHHHHTTCT-TCCEEECCSSCEECSG-GGHHHHHHHHHCCSEECCCBEEESGGGT
T ss_pred cChhHhhhhhhccccccccccccccccccccccc-ccCEEEecCCCCCCCc-cchHHHHHHHhCcCCCCceEeCCchHHc
Confidence 7788899999999999999999977777777665 8999999999877321 1111122355556666666666666555
Q ss_pred c
Q 039650 385 S 385 (391)
Q Consensus 385 ~ 385 (391)
.
T Consensus 270 g 270 (284)
T d1ozna_ 270 G 270 (284)
T ss_dssp T
T ss_pred C
Confidence 4
No 9
>d1p9ag_ c.10.2.7 (G:) von Willebrand factor binding domain of glycoprotein Ib alpha {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.83 E-value=1.7e-19 Score=151.25 Aligned_cols=132 Identities=28% Similarity=0.285 Sum_probs=61.9
Q ss_pred CCCCCEEECCCCCCCCCCCCCcCCCCCccEEEcCCCcCCCCCCccccCCCcccEEEccCCCCCCCccccccCCCcccEEE
Q 039650 145 LKSLSDLRLDYNTLSGSIPYSFGNLTKLVTLYLDTNALSGSIPDEIRNLKSLFNLQLDNNTLSGSIPLSLGNLTNLTTLY 224 (391)
Q Consensus 145 ~~~L~~L~l~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~l~~~~~L~~L~l~~~~~~~~~~~~~~~~~~L~~L~ 224 (391)
+++|+.|++++|.+.. .+..+..+++|+.|++.++.+.......+..+.+++.+++.+|.+....+..+..+++++.++
T Consensus 76 l~~L~~L~Ls~N~l~~-~~~~~~~l~~L~~L~l~~~~~~~~~~~~~~~l~~l~~L~l~~n~l~~l~~~~~~~l~~l~~l~ 154 (266)
T d1p9ag_ 76 LPVLGTLDLSHNQLQS-LPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYLKGNELKTLPPGLLTPTPKLEKLS 154 (266)
T ss_dssp CTTCCEEECCSSCCSS-CCCCTTTCTTCCEEECCSSCCCCCCSSTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEE
T ss_pred cccccccccccccccc-cccccccccccccccccccccceeeccccccccccccccccccccceeccccccccccchhcc
Confidence 3445555555554442 233444455555555555544433333444444555555555444433333333444455555
Q ss_pred ccCcccccccchhhccCCCCCEEEcCCCcccCccCccccCCCCccEEEccCCcc
Q 039650 225 FSMNALSGSIPNEITNLRSLSDLQLSENTLNGSIPLALGNLTKLVVLYLSINKL 278 (391)
Q Consensus 225 l~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~L~~l~l~~~~~ 278 (391)
+++|.++...+..|..+++|+.|++++|.+. ..+..+..+++|+.+++++|.+
T Consensus 155 l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~L~-~lp~~~~~~~~L~~L~L~~Np~ 207 (266)
T d1p9ag_ 155 LANNNLTELPAGLLNGLENLDTLLLQENSLY-TIPKGFFGSHLLPFAFLHGNPW 207 (266)
T ss_dssp CTTSCCSCCCTTTTTTCTTCCEEECCSSCCC-CCCTTTTTTCCCSEEECCSCCB
T ss_pred cccccccccCccccccccccceeecccCCCc-ccChhHCCCCCCCEEEecCCCC
Confidence 5554444444444445555555555555554 3333333445555555555544
No 10
>d1p9ag_ c.10.2.7 (G:) von Willebrand factor binding domain of glycoprotein Ib alpha {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.83 E-value=1.2e-19 Score=152.17 Aligned_cols=202 Identities=26% Similarity=0.238 Sum_probs=150.0
Q ss_pred cCCCCCCEEECCCCCCCCCCCCCcCCCCCccEEEcCCCcCCCCCCccccCCCcccEEEccCCCCCCCccccccCCCcccE
Q 039650 143 GNLKSLSDLRLDYNTLSGSIPYSFGNLTKLVTLYLDTNALSGSIPDEIRNLKSLFNLQLDNNTLSGSIPLSLGNLTNLTT 222 (391)
Q Consensus 143 ~~~~~L~~L~l~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~l~~~~~L~~L~l~~~~~~~~~~~~~~~~~~L~~ 222 (391)
.+...+.+++.++++++ .+|..+. ++++.|++++|.+....+..|..+++|+.|++++|.+.. . ..+..+++|+.
T Consensus 7 ~~~~~~~~v~C~~~~L~-~iP~~lp--~~l~~L~Ls~N~i~~l~~~~f~~l~~L~~L~L~~N~l~~-l-~~~~~l~~L~~ 81 (266)
T d1p9ag_ 7 SKVASHLEVNCDKRNLT-ALPPDLP--KDTTILHLSENLLYTFSLATLMPYTRLTQLNLDRAELTK-L-QVDGTLPVLGT 81 (266)
T ss_dssp ECSTTCCEEECTTSCCS-SCCSCCC--TTCCEEECTTSCCSEEEGGGGTTCTTCCEEECTTSCCCE-E-ECCSCCTTCCE
T ss_pred cccCCCeEEEccCCCCC-eeCcCcC--cCCCEEECcCCcCCCcCHHHhhccccccccccccccccc-c-ccccccccccc
Confidence 44566777888888887 4555542 578999999998886666678888899999999888762 2 23567788888
Q ss_pred EEccCcccccccchhhccCCCCCEEEcCCCcccCccCccccCCCCccEEEccCCccccccccccccCCcccEEEcCCCcc
Q 039650 223 LYFSMNALSGSIPNEITNLRSLSDLQLSENTLNGSIPLALGNLTKLVVLYLSINKLSGSISLSYASLTSLTNLYLYENSL 302 (391)
Q Consensus 223 L~l~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~L~~l~l~~~~~~~~~~~~~~~~~~L~~L~l~~~~~ 302 (391)
|++++|.+. ..+..+..+++|+.|+++++.+.......+..+.+++++.+++|.+.......+..++.++.+++++|.+
T Consensus 82 L~Ls~N~l~-~~~~~~~~l~~L~~L~l~~~~~~~~~~~~~~~l~~l~~L~l~~n~l~~l~~~~~~~l~~l~~l~l~~N~l 160 (266)
T d1p9ag_ 82 LDLSHNQLQ-SLPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYLKGNELKTLPPGLLTPTPKLEKLSLANNNL 160 (266)
T ss_dssp EECCSSCCS-SCCCCTTTCTTCCEEECCSSCCCCCCSSTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCC
T ss_pred ccccccccc-ccccccccccccccccccccccceeeccccccccccccccccccccceeccccccccccchhcccccccc
Confidence 888888776 3455667778888888888877766666677778888888888877766666667777888888888887
Q ss_pred CchhhHhhhCCCCccEEEcCCCcccchhHHHHHHhhccccEEEcCCCccc
Q 039650 303 CDSIQKEIGDMKSLSILDLSSNKLNGSILLSLANLTNSLKVLYLSSNHIV 352 (391)
Q Consensus 303 ~~~~~~~~~~~~~L~~L~l~~~~i~~~~~~~~~~~~~~L~~L~l~~~~~~ 352 (391)
.......+..+++|+.|++++|+++ .+|..+.... +|+.|++++|+..
T Consensus 161 ~~~~~~~~~~l~~L~~L~Ls~N~L~-~lp~~~~~~~-~L~~L~L~~Np~~ 208 (266)
T d1p9ag_ 161 TELPAGLLNGLENLDTLLLQENSLY-TIPKGFFGSH-LLPFAFLHGNPWL 208 (266)
T ss_dssp SCCCTTTTTTCTTCCEEECCSSCCC-CCCTTTTTTC-CCSEEECCSCCBC
T ss_pred cccCccccccccccceeecccCCCc-ccChhHCCCC-CCCEEEecCCCCC
Confidence 7766667777788888888888877 5555555544 7788888877654
No 11
>d1z7xw1 c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.81 E-value=6.2e-22 Score=180.14 Aligned_cols=379 Identities=21% Similarity=0.166 Sum_probs=242.5
Q ss_pred CcccccCccCCCc-hhhhhcCCcccEEeecCCcCCC----CCCCCCCCCCCccEEecCCcccccCChhhhh-----cCCC
Q 039650 1 LLSFSKNQLSGLI-PHEIGRLSSFNGLSLYSNFLKG----SIPPSLGNLTSLSYIGISNNLLSGSIPNEVE-----SLKS 70 (391)
Q Consensus 1 ~l~l~~~~~~~~~-~~~~~~~~~L~~L~l~~~~~~~----~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~-----~~~~ 70 (391)
.||++++++++.. ...+..++++++|++++|.+++ .++..+..+++|++|++++|.+.+.....+. ....
T Consensus 6 ~ld~~~~~i~~~~~~~l~~~l~~l~~L~L~~~~i~~~~~~~l~~~L~~~~~L~~LdLs~N~i~~~~~~~l~~~l~~~~~~ 85 (460)
T d1z7xw1 6 SLDIQCEELSDARWAELLPLLQQCQVVRLDDCGLTEARCKDISSALRVNPALAELNLRSNELGDVGVHCVLQGLQTPSCK 85 (460)
T ss_dssp EEEEESCCCCHHHHHHHHHHHTTCSEEEEESSCCCHHHHHHHHHHHHTCTTCCEEECTTCCCHHHHHHHHHHTTCSTTCC
T ss_pred EEEeeCCcCChHHHHHHHHhCCCCCEEEeCCCCCCHHHHHHHHHHHhcCCCCCEEECcCCcCChHHHHHHHHHHhcCCCC
Confidence 3789999999643 3446789999999999998763 3345577899999999999987633222222 2357
Q ss_pred CCEEEeeCCccCCC----CcccccCCCCCceEEecccccccccchhhcc-cccchhhhhceeeeccccc----ccccccc
Q 039650 71 LSDLRLYNNTLKGS----IPSSLGNLTNLVNLHLHINALSGLIPDEIRN-LEFLSDLIYNYLIYWINAL----SDLIPNE 141 (391)
Q Consensus 71 L~~L~l~~~~~~~~----~~~~~~~l~~L~~L~l~~~~~~~~~~~~~~~-l~~L~~l~l~~~~~~~~~~----~~~~~~~ 141 (391)
|++|++++|.++.. ++..+..+++|++|++++|.+.......+.. +.... ............. .......
T Consensus 86 L~~L~L~~n~it~~~~~~l~~~l~~~~~L~~L~L~~N~i~~~~~~~l~~~l~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 164 (460)
T d1z7xw1 86 IQKLSLQNCCLTGAGCGVLSSTLRTLPTLQELHLSDNLLGDAGLQLLCEGLLDPQ-CRLEKLQLEYCSLSAASCEPLASV 164 (460)
T ss_dssp CCEEECTTSCCBGGGHHHHHHHTTSCTTCCEEECCSSBCHHHHHHHHHHHHTSTT-CCCCEEECTTSCCBGGGHHHHHHH
T ss_pred CCEEECCCCCccccccccccchhhccccccccccccccchhhhhhhhhhcccccc-cccccccccccccchhhhcccccc
Confidence 99999999988743 3456778999999999999886443322211 11100 0000111111111 0112233
Q ss_pred ccCCCCCCEEECCCCCCCCCCC----CCc-CCCCCccEEEcCCCcCCCCCC----ccccCCCcccEEEccCCCCCCC---
Q 039650 142 IGNLKSLSDLRLDYNTLSGSIP----YSF-GNLTKLVTLYLDTNALSGSIP----DEIRNLKSLFNLQLDNNTLSGS--- 209 (391)
Q Consensus 142 ~~~~~~L~~L~l~~~~~~~~~~----~~~-~~~~~L~~L~l~~~~~~~~~~----~~l~~~~~L~~L~l~~~~~~~~--- 209 (391)
+.....++.++++++....... ..+ ........+.+.++....... ..+...+.++.+.+.++...+.
T Consensus 165 l~~~~~~~~~~ls~~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~~l~~~~n~~~~~~~~ 244 (460)
T d1z7xw1 165 LRAKPDFKELTVSNNDINEAGVRVLCQGLKDSPCQLEALKLESCGVTSDNCRDLCGIVASKASLRELALGSNKLGDVGMA 244 (460)
T ss_dssp HHHCTTCCEEECCSSBCHHHHHHHHHHHHHHSCCCCCEEECTTSCCBTTHHHHHHHHHHHCTTCCEEECCSSBCHHHHHH
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccccchhhhcccccccccccccccchhhccccccccc
Confidence 4455778888888765431110 011 122355677777776543211 2345567888999988865422
Q ss_pred --ccccccCCCcccEEEccCcccccc----cchhhccCCCCCEEEcCCCcccCccCc----c-ccCCCCccEEEccCCcc
Q 039650 210 --IPLSLGNLTNLTTLYFSMNALSGS----IPNEITNLRSLSDLQLSENTLNGSIPL----A-LGNLTKLVVLYLSINKL 278 (391)
Q Consensus 210 --~~~~~~~~~~L~~L~l~~~~~~~~----~~~~~~~~~~L~~L~l~~~~~~~~~~~----~-~~~~~~L~~l~l~~~~~ 278 (391)
..........++.+++++|.+... ....+...+.++.++++++.+...... . ......|+.++++++.+
T Consensus 245 ~~~~~~~~~~~~l~~l~l~~n~i~~~~~~~~~~~l~~~~~l~~l~l~~n~i~~~~~~~l~~~l~~~~~~L~~l~l~~~~l 324 (460)
T d1z7xw1 245 ELCPGLLHPSSRLRTLWIWECGITAKGCGDLCRVLRAKESLKELSLAGNELGDEGARLLCETLLEPGCQLESLWVKSCSF 324 (460)
T ss_dssp HHHHHHTSTTCCCCEEECTTSCCCHHHHHHHHHHHHHCTTCCEEECTTCCCHHHHHHHHHHHHTSTTCCCCEEECTTSCC
T ss_pred hhhcccccccccccccccccccccccccccccccccccccccccccccccccccccchhhccccccccccccccccccch
Confidence 122334567899999998876532 223445678999999999877532111 1 12446899999999988
Q ss_pred ccccccc----cccCCcccEEEcCCCccCchhhH----hhh-CCCCccEEEcCCCcccchhHHHHHHh---hccccEEEc
Q 039650 279 SGSISLS----YASLTSLTNLYLYENSLCDSIQK----EIG-DMKSLSILDLSSNKLNGSILLSLANL---TNSLKVLYL 346 (391)
Q Consensus 279 ~~~~~~~----~~~~~~L~~L~l~~~~~~~~~~~----~~~-~~~~L~~L~l~~~~i~~~~~~~~~~~---~~~L~~L~l 346 (391)
....... +...++|++|++++|.+.+.... .+. ..+.|+.|++++|.+++.....+... .++|++|++
T Consensus 325 ~~~~~~~l~~~~~~~~~L~~L~Ls~N~i~~~g~~~l~~~l~~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~L~~L~L 404 (460)
T d1z7xw1 325 TAACCSHFSSVLAQNRFLLELQISNNRLEDAGVRELCQGLGQPGSVLRVLWLADCDVSDSSCSSLAATLLANHSLRELDL 404 (460)
T ss_dssp BGGGHHHHHHHHHHCSSCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCCHHHHHHHHHHHHHCCCCCEEEC
T ss_pred hhhhhhhcccccccccchhhhheeeecccCcccchhhhhhhcccCCCCEEECCCCCCChHHHHHHHHHHhcCCCCCEEEC
Confidence 7543222 34567899999999998653322 232 46789999999999997665555433 358999999
Q ss_pred CCCcccCCCcc----ccc-CCccccEEEccccccccCCC
Q 039650 347 SSNHIVGEIPL----GHG-KFSSLIQLILTNNELSGQLS 380 (391)
Q Consensus 347 ~~~~~~~~~~~----~~~-~~~~L~~L~l~~~~~~~~~~ 380 (391)
++|++++.... .+. +...|+.|++.++.+.....
T Consensus 405 s~N~i~~~g~~~l~~~l~~~~~~L~~l~l~~~~~~~~~~ 443 (460)
T d1z7xw1 405 SNNCLGDAGILQLVESVRQPGCLLEQLVLYDIYWSEEME 443 (460)
T ss_dssp CSSSCCHHHHHHHHHHHTSTTCCCCEEECTTCCCCHHHH
T ss_pred CCCcCCHHHHHHHHHHHHhCCCccCEEECCCCCCCHHHH
Confidence 99998865333 333 34479999999998875333
No 12
>d1jl5a_ c.10.2.6 (A:) Leucine rich effector protein YopM {Yersinia pestis [TaxId: 632]}
Probab=99.77 E-value=3.4e-16 Score=136.70 Aligned_cols=313 Identities=30% Similarity=0.280 Sum_probs=177.5
Q ss_pred CcccEEeecCCcCCCCCCCCCCCCCCccEEecCCcccccCChhhhhcCCCCCEEEeeCCccCCCCcccccCCCCCceEEe
Q 039650 21 SSFNGLSLYSNFLKGSIPPSLGNLTSLSYIGISNNLLSGSIPNEVESLKSLSDLRLYNNTLKGSIPSSLGNLTNLVNLHL 100 (391)
Q Consensus 21 ~~L~~L~l~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~l~~L~~L~l 100 (391)
.++++|+++++.++ .+|+. .++|++|++++|.++ .+|.. +.+|+.|++.++.++. ++. + .+.|++|++
T Consensus 38 ~~l~~LdLs~~~L~-~lp~~---~~~L~~L~Ls~N~l~-~lp~~---~~~L~~L~l~~n~l~~-l~~-l--p~~L~~L~L 105 (353)
T d1jl5a_ 38 RQAHELELNNLGLS-SLPEL---PPHLESLVASCNSLT-ELPEL---PQSLKSLLVDNNNLKA-LSD-L--PPLLEYLGV 105 (353)
T ss_dssp HTCSEEECTTSCCS-CCCSC---CTTCSEEECCSSCCS-SCCCC---CTTCCEEECCSSCCSC-CCS-C--CTTCCEEEC
T ss_pred cCCCEEEeCCCCCC-CCCCC---CCCCCEEECCCCCCc-ccccc---hhhhhhhhhhhcccch-hhh-h--ccccccccc
Confidence 47899999999887 56654 478999999999887 66754 4679999999988773 322 1 146999999
Q ss_pred cccccccccchhhcccccchhhhhceeeeccccccccccccccCCCCCCEEECCCCCCCCCCCCCcCCCCCccEEEcCCC
Q 039650 101 HINALSGLIPDEIRNLEFLSDLIYNYLIYWINALSDLIPNEIGNLKSLSDLRLDYNTLSGSIPYSFGNLTKLVTLYLDTN 180 (391)
Q Consensus 101 ~~~~~~~~~~~~~~~l~~L~~l~l~~~~~~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~L~~L~l~~~ 180 (391)
++|.+.... .+..+.+|+.+.+. .+..... ......+..+.+...... ....+..++.++.+.+.++
T Consensus 106 ~~n~l~~lp--~~~~l~~L~~L~l~-----~~~~~~~----~~~~~~l~~l~~~~~~~~--~~~~l~~l~~l~~L~l~~n 172 (353)
T d1jl5a_ 106 SNNQLEKLP--ELQNSSFLKIIDVD-----NNSLKKL----PDLPPSLEFIAAGNNQLE--ELPELQNLPFLTAIYADNN 172 (353)
T ss_dssp CSSCCSSCC--CCTTCTTCCEEECC-----SSCCSCC----CCCCTTCCEEECCSSCCS--SCCCCTTCTTCCEEECCSS
T ss_pred ccccccccc--chhhhccceeeccc-----ccccccc----ccccccccchhhcccccc--ccccccccccceecccccc
Confidence 998886442 23444555533222 1222111 111234455555443332 1223444555566666555
Q ss_pred cCCCCCCccccCCCcccEEEccCCCCCCCccccccCCCcccEEEccCcccccccchhhccCCCCCEEEcCCCcccCccCc
Q 039650 181 ALSGSIPDEIRNLKSLFNLQLDNNTLSGSIPLSLGNLTNLTTLYFSMNALSGSIPNEITNLRSLSDLQLSENTLNGSIPL 260 (391)
Q Consensus 181 ~~~~~~~~~l~~~~~L~~L~l~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~ 260 (391)
..... +. .....+.+...+..+. .. ..+..++.++.+++.++.... .+ ....++..+.+..+.+... +
T Consensus 173 ~~~~~-~~---~~~~~~~l~~~~~~~~-~~-~~~~~l~~L~~l~l~~n~~~~-~~---~~~~~l~~~~~~~~~~~~~-~- 240 (353)
T d1jl5a_ 173 SLKKL-PD---LPLSLESIVAGNNILE-EL-PELQNLPFLTTIYADNNLLKT-LP---DLPPSLEALNVRDNYLTDL-P- 240 (353)
T ss_dssp CCSSC-CC---CCTTCCEEECCSSCCS-SC-CCCTTCTTCCEEECCSSCCSS-CC---SCCTTCCEEECCSSCCSCC-C-
T ss_pred ccccc-cc---cccccccccccccccc-cc-ccccccccccccccccccccc-cc---ccccccccccccccccccc-c-
Confidence 44321 11 1112233333333332 11 123445666666666654331 11 1234455555555544311 1
Q ss_pred cccCCCCccEEEccCCccccccccccccCCcccEEEcCCCccCchhhHhhhCCCCccEEEcCCCcccchhHHHHHHhhcc
Q 039650 261 ALGNLTKLVVLYLSINKLSGSISLSYASLTSLTNLYLYENSLCDSIQKEIGDMKSLSILDLSSNKLNGSILLSLANLTNS 340 (391)
Q Consensus 261 ~~~~~~~L~~l~l~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~L~~L~l~~~~i~~~~~~~~~~~~~~ 340 (391)
...+.+....+..+.+..... -.......++..+.+... ...+++|++|++++|+++ .+|. ..++
T Consensus 241 --~~~~~l~~~~~~~~~~~~l~~----l~~~~~~~~~~~~~~~~~----~~~~~~L~~L~Ls~N~l~-~lp~----~~~~ 305 (353)
T d1jl5a_ 241 --ELPQSLTFLDVSENIFSGLSE----LPPNLYYLNASSNEIRSL----CDLPPSLEELNVSNNKLI-ELPA----LPPR 305 (353)
T ss_dssp --CCCTTCCEEECCSSCCSEESC----CCTTCCEEECCSSCCSEE----CCCCTTCCEEECCSSCCS-CCCC----CCTT
T ss_pred --ccccccccccccccccccccc----ccchhcccccccCccccc----cccCCCCCEEECCCCccC-cccc----ccCC
Confidence 123344455554443331110 112334455555555332 234689999999999987 3443 2358
Q ss_pred ccEEEcCCCcccCCCcccccCCccccEEEccccccccCCCccccccCCCc
Q 039650 341 LKVLYLSSNHIVGEIPLGHGKFSSLIQLILTNNELSGQLSPELGSLIQLE 390 (391)
Q Consensus 341 L~~L~l~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~L~ 390 (391)
|+.|++++|+++ .++.. +++|++|++++|++. .+|+.+.+++.|+
T Consensus 306 L~~L~L~~N~L~-~l~~~---~~~L~~L~L~~N~L~-~lp~~~~~L~~L~ 350 (353)
T d1jl5a_ 306 LERLIASFNHLA-EVPEL---PQNLKQLHVEYNPLR-EFPDIPESVEDLR 350 (353)
T ss_dssp CCEEECCSSCCS-CCCCC---CTTCCEEECCSSCCS-SCCCCCTTCCEEE
T ss_pred CCEEECCCCcCC-ccccc---cCCCCEEECcCCcCC-CCCccccccCeeE
Confidence 999999999988 45542 568999999999977 7888888887775
No 13
>d1h6ua2 c.10.2.1 (A:36-262) Internalin H {Listeria monocytogenes [TaxId: 1639]}
Probab=99.72 E-value=1.8e-16 Score=129.25 Aligned_cols=188 Identities=27% Similarity=0.405 Sum_probs=98.8
Q ss_pred CCCCCccEEecCCcccccCChhhhhcCCCCCEEEeeCCccCCCCcccccCCCCCceEEecccccccccchhhcccccchh
Q 039650 42 GNLTSLSYIGISNNLLSGSIPNEVESLKSLSDLRLYNNTLKGSIPSSLGNLTNLVNLHLHINALSGLIPDEIRNLEFLSD 121 (391)
Q Consensus 42 ~~~~~L~~L~l~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~l~~L~~L~l~~~~~~~~~~~~~~~l~~L~~ 121 (391)
..+.+|++|++.+|.+. .+ ..+.++++|++|++++|.+++.. .+..++++++++++++.++..
T Consensus 38 ~~l~~L~~L~l~~~~i~-~l-~~l~~l~~L~~L~ls~n~i~~~~--~l~~l~~l~~l~~~~n~~~~i------------- 100 (227)
T d1h6ua2 38 ADLDGITTLSAFGTGVT-TI-EGVQYLNNLIGLELKDNQITDLA--PLKNLTKITELELSGNPLKNV------------- 100 (227)
T ss_dssp HHHHTCCEEECTTSCCC-CC-TTGGGCTTCCEEECCSSCCCCCG--GGTTCCSCCEEECCSCCCSCC-------------
T ss_pred HHcCCcCEEECCCCCCC-cc-hhHhcCCCCcEeecCCceeeccc--ccccccccccccccccccccc-------------
Confidence 34555556666555554 23 23555556666666655555321 255555666666555544311
Q ss_pred hhhceeeeccccccccccccccCCCCCCEEECCCCCCCCCCCCCcCCCCCccEEEcCCCcCCCCCCccccCCCcccEEEc
Q 039650 122 LIYNYLIYWINALSDLIPNEIGNLKSLSDLRLDYNTLSGSIPYSFGNLTKLVTLYLDTNALSGSIPDEIRNLKSLFNLQL 201 (391)
Q Consensus 122 l~l~~~~~~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~l~~~~~L~~L~l 201 (391)
..+.++++|+.++++++..... ..+...+.++.+.+.++.+... ..+..+++|+.|++
T Consensus 101 ------------------~~l~~l~~L~~l~l~~~~~~~~--~~~~~~~~~~~l~~~~~~~~~~--~~~~~~~~L~~L~l 158 (227)
T d1h6ua2 101 ------------------SAIAGLQSIKTLDLTSTQITDV--TPLAGLSNLQVLYLDLNQITNI--SPLAGLTNLQYLSI 158 (227)
T ss_dssp ------------------GGGTTCTTCCEEECTTSCCCCC--GGGTTCTTCCEEECCSSCCCCC--GGGGGCTTCCEEEC
T ss_pred ------------------cccccccccccccccccccccc--chhccccchhhhhchhhhhchh--hhhccccccccccc
Confidence 1123345555555555443321 1233445555555555544321 22445556666666
Q ss_pred cCCCCCCCccccccCCCcccEEEccCcccccccchhhccCCCCCEEEcCCCcccCccCccccCCCCccEEEcc
Q 039650 202 DNNTLSGSIPLSLGNLTNLTTLYFSMNALSGSIPNEITNLRSLSDLQLSENTLNGSIPLALGNLTKLVVLYLS 274 (391)
Q Consensus 202 ~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~L~~l~l~ 274 (391)
+++.+.+. ..+.++++|+.|++++|.++.. ..+..+++|++|++++|.+++.. .+..+++|+.++++
T Consensus 159 ~~n~~~~~--~~l~~l~~L~~L~Ls~n~l~~l--~~l~~l~~L~~L~Ls~N~lt~i~--~l~~l~~L~~L~ls 225 (227)
T d1h6ua2 159 GNAQVSDL--TPLANLSKLTTLKADDNKISDI--SPLASLPNLIEVHLKNNQISDVS--PLANTSNLFIVTLT 225 (227)
T ss_dssp CSSCCCCC--GGGTTCTTCCEEECCSSCCCCC--GGGGGCTTCCEEECTTSCCCBCG--GGTTCTTCCEEEEE
T ss_pred cccccccc--hhhcccccceecccCCCccCCC--hhhcCCCCCCEEECcCCcCCCCc--ccccCCCCCEEEee
Confidence 66655422 2255566666666666665532 23556677777777777665332 25667777777665
No 14
>d1z7xw1 c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.72 E-value=8.3e-20 Score=165.88 Aligned_cols=354 Identities=19% Similarity=0.169 Sum_probs=214.7
Q ss_pred CcccEEeecCCcCCC-CCCCCCCCCCCccEEecCCccccc----CChhhhhcCCCCCEEEeeCCccCCCC----ccccc-
Q 039650 21 SSFNGLSLYSNFLKG-SIPPSLGNLTSLSYIGISNNLLSG----SIPNEVESLKSLSDLRLYNNTLKGSI----PSSLG- 90 (391)
Q Consensus 21 ~~L~~L~l~~~~~~~-~~~~~~~~~~~L~~L~l~~~~~~~----~~~~~~~~~~~L~~L~l~~~~~~~~~----~~~~~- 90 (391)
++|++||++++.+.+ .+.+.+..++++++|++++|.++. .+...+..+++|++|++++|.++... ...+.
T Consensus 2 ~~l~~ld~~~~~i~~~~~~~l~~~l~~l~~L~L~~~~i~~~~~~~l~~~L~~~~~L~~LdLs~N~i~~~~~~~l~~~l~~ 81 (460)
T d1z7xw1 2 LDIQSLDIQCEELSDARWAELLPLLQQCQVVRLDDCGLTEARCKDISSALRVNPALAELNLRSNELGDVGVHCVLQGLQT 81 (460)
T ss_dssp EEEEEEEEESCCCCHHHHHHHHHHHTTCSEEEEESSCCCHHHHHHHHHHHHTCTTCCEEECTTCCCHHHHHHHHHHTTCS
T ss_pred CCCCEEEeeCCcCChHHHHHHHHhCCCCCEEEeCCCCCCHHHHHHHHHHHhcCCCCCEEECcCCcCChHHHHHHHHHHhc
Confidence 478899999988864 223445677889999999997763 23445677889999999988775322 22222
Q ss_pred CCCCCceEEecccccccccc----hhhcccccchhhhhceeeecccccccc----cccccc-CCCCCCEEECCCCCCCCC
Q 039650 91 NLTNLVNLHLHINALSGLIP----DEIRNLEFLSDLIYNYLIYWINALSDL----IPNEIG-NLKSLSDLRLDYNTLSGS 161 (391)
Q Consensus 91 ~l~~L~~L~l~~~~~~~~~~----~~~~~l~~L~~l~l~~~~~~~~~~~~~----~~~~~~-~~~~L~~L~l~~~~~~~~ 161 (391)
...+|++|++++|.+++... ..+..+++|+.+.+ ..+.+... ....+. ..................
T Consensus 82 ~~~~L~~L~L~~n~it~~~~~~l~~~l~~~~~L~~L~L-----~~N~i~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~ 156 (460)
T d1z7xw1 82 PSCKIQKLSLQNCCLTGAGCGVLSSTLRTLPTLQELHL-----SDNLLGDAGLQLLCEGLLDPQCRLEKLQLEYCSLSAA 156 (460)
T ss_dssp TTCCCCEEECTTSCCBGGGHHHHHHHTTSCTTCCEEEC-----CSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCBGG
T ss_pred CCCCCCEEECCCCCccccccccccchhhcccccccccc-----ccccchhhhhhhhhhcccccccccccccccccccchh
Confidence 23579999999988864422 23344445553332 22222211 111111 112223333322221100
Q ss_pred C----CCCcCCCCCccEEEcCCCcCCCCCC----ccc-cCCCcccEEEccCCCCCCCc----cccccCCCcccEEEccCc
Q 039650 162 I----PYSFGNLTKLVTLYLDTNALSGSIP----DEI-RNLKSLFNLQLDNNTLSGSI----PLSLGNLTNLTTLYFSMN 228 (391)
Q Consensus 162 ~----~~~~~~~~~L~~L~l~~~~~~~~~~----~~l-~~~~~L~~L~l~~~~~~~~~----~~~~~~~~~L~~L~l~~~ 228 (391)
. ...+.....++.+.+.++....... ..+ ........+.+.++...... ...+...+.++.+.+.++
T Consensus 157 ~~~~~~~~l~~~~~~~~~~ls~~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~~l~~~~n 236 (460)
T d1z7xw1 157 SCEPLASVLRAKPDFKELTVSNNDINEAGVRVLCQGLKDSPCQLEALKLESCGVTSDNCRDLCGIVASKASLRELALGSN 236 (460)
T ss_dssp GHHHHHHHHHHCTTCCEEECCSSBCHHHHHHHHHHHHHHSCCCCCEEECTTSCCBTTHHHHHHHHHHHCTTCCEEECCSS
T ss_pred hhcccccccccccccccccccccccccccccccccccccccccccccccccccccchhhhcccccccccccccccchhhc
Confidence 0 0012233566677776655432110 111 12234556777666554221 123345678889999887
Q ss_pred ccccc-----cchhhccCCCCCEEEcCCCcccCc----cCccccCCCCccEEEccCCccccccccc-----cccCCcccE
Q 039650 229 ALSGS-----IPNEITNLRSLSDLQLSENTLNGS----IPLALGNLTKLVVLYLSINKLSGSISLS-----YASLTSLTN 294 (391)
Q Consensus 229 ~~~~~-----~~~~~~~~~~L~~L~l~~~~~~~~----~~~~~~~~~~L~~l~l~~~~~~~~~~~~-----~~~~~~L~~ 294 (391)
..... ..........++.+++++|.+... ....+...+.++.+++++|.+.+..... ....+.|+.
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~l~~l~l~~n~i~~~~~~~~~~~l~~~~~l~~l~l~~n~i~~~~~~~l~~~l~~~~~~L~~ 316 (460)
T d1z7xw1 237 KLGDVGMAELCPGLLHPSSRLRTLWIWECGITAKGCGDLCRVLRAKESLKELSLAGNELGDEGARLLCETLLEPGCQLES 316 (460)
T ss_dssp BCHHHHHHHHHHHHTSTTCCCCEEECTTSCCCHHHHHHHHHHHHHCTTCCEEECTTCCCHHHHHHHHHHHHTSTTCCCCE
T ss_pred cccccccchhhcccccccccccccccccccccccccccccccccccccccccccccccccccccchhhcccccccccccc
Confidence 65321 222334567899999999877522 1223456788999999999886422211 123468999
Q ss_pred EEcCCCccCchhhH----hhhCCCCccEEEcCCCcccchhHHHHHHh----hccccEEEcCCCcccCC----CcccccCC
Q 039650 295 LYLYENSLCDSIQK----EIGDMKSLSILDLSSNKLNGSILLSLANL----TNSLKVLYLSSNHIVGE----IPLGHGKF 362 (391)
Q Consensus 295 L~l~~~~~~~~~~~----~~~~~~~L~~L~l~~~~i~~~~~~~~~~~----~~~L~~L~l~~~~~~~~----~~~~~~~~ 362 (391)
++++++.+...... .+...++|++|++++|++++.+...+... .+.|++|++++|.+++. ++..+..+
T Consensus 317 l~l~~~~l~~~~~~~l~~~~~~~~~L~~L~Ls~N~i~~~g~~~l~~~l~~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~ 396 (460)
T d1z7xw1 317 LWVKSCSFTAACCSHFSSVLAQNRFLLELQISNNRLEDAGVRELCQGLGQPGSVLRVLWLADCDVSDSSCSSLAATLLAN 396 (460)
T ss_dssp EECTTSCCBGGGHHHHHHHHHHCSSCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCCHHHHHHHHHHHHHC
T ss_pred ccccccchhhhhhhhcccccccccchhhhheeeecccCcccchhhhhhhcccCCCCEEECCCCCCChHHHHHHHHHHhcC
Confidence 99999988654433 34567899999999999987766665432 34699999999999864 44556778
Q ss_pred ccccEEEccccccccCC
Q 039650 363 SSLIQLILTNNELSGQL 379 (391)
Q Consensus 363 ~~L~~L~l~~~~~~~~~ 379 (391)
++|++|++++|+++..+
T Consensus 397 ~~L~~L~Ls~N~i~~~g 413 (460)
T d1z7xw1 397 HSLRELDLSNNCLGDAG 413 (460)
T ss_dssp CCCCEEECCSSSCCHHH
T ss_pred CCCCEEECCCCcCCHHH
Confidence 99999999999987533
No 15
>d1h6ua2 c.10.2.1 (A:36-262) Internalin H {Listeria monocytogenes [TaxId: 1639]}
Probab=99.70 E-value=6e-16 Score=126.16 Aligned_cols=188 Identities=26% Similarity=0.377 Sum_probs=100.0
Q ss_pred CCCCCCEEECCCCCCCCCCCCCcCCCCCccEEEcCCCcCCCCCCccccCCCcccEEEccCCCCCCCccccccCCCcccEE
Q 039650 144 NLKSLSDLRLDYNTLSGSIPYSFGNLTKLVTLYLDTNALSGSIPDEIRNLKSLFNLQLDNNTLSGSIPLSLGNLTNLTTL 223 (391)
Q Consensus 144 ~~~~L~~L~l~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~l~~~~~L~~L~l~~~~~~~~~~~~~~~~~~L~~L 223 (391)
.+.+|+.|++.++.++.. ..+..+++|++|++++|.+.... .+..+++++.++++++.+.+
T Consensus 39 ~l~~L~~L~l~~~~i~~l--~~l~~l~~L~~L~ls~n~i~~~~--~l~~l~~l~~l~~~~n~~~~--------------- 99 (227)
T d1h6ua2 39 DLDGITTLSAFGTGVTTI--EGVQYLNNLIGLELKDNQITDLA--PLKNLTKITELELSGNPLKN--------------- 99 (227)
T ss_dssp HHHTCCEEECTTSCCCCC--TTGGGCTTCCEEECCSSCCCCCG--GGTTCCSCCEEECCSCCCSC---------------
T ss_pred HcCCcCEEECCCCCCCcc--hhHhcCCCCcEeecCCceeeccc--cccccccccccccccccccc---------------
Confidence 345566666665555532 23455555555555555554221 24444555555555444331
Q ss_pred EccCcccccccchhhccCCCCCEEEcCCCcccCccCccccCCCCccEEEccCCccccccccccccCCcccEEEcCCCccC
Q 039650 224 YFSMNALSGSIPNEITNLRSLSDLQLSENTLNGSIPLALGNLTKLVVLYLSINKLSGSISLSYASLTSLTNLYLYENSLC 303 (391)
Q Consensus 224 ~l~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~L~~l~l~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~ 303 (391)
. ..+..+++|+.+.++++...+. ..+...+.+..+.++++.+.... .+..+++|+.|++++|.+.
T Consensus 100 ---------i--~~l~~l~~L~~l~l~~~~~~~~--~~~~~~~~~~~l~~~~~~~~~~~--~~~~~~~L~~L~l~~n~~~ 164 (227)
T d1h6ua2 100 ---------V--SAIAGLQSIKTLDLTSTQITDV--TPLAGLSNLQVLYLDLNQITNIS--PLAGLTNLQYLSIGNAQVS 164 (227)
T ss_dssp ---------C--GGGTTCTTCCEEECTTSCCCCC--GGGTTCTTCCEEECCSSCCCCCG--GGGGCTTCCEEECCSSCCC
T ss_pred ---------c--cccccccccccccccccccccc--chhccccchhhhhchhhhhchhh--hhccccccccccccccccc
Confidence 1 1234455555555555544321 22344555566666555554322 2345566666666666654
Q ss_pred chhhHhhhCCCCccEEEcCCCcccchhHHHHHHhhccccEEEcCCCcccCCCcccccCCccccEEEccc
Q 039650 304 DSIQKEIGDMKSLSILDLSSNKLNGSILLSLANLTNSLKVLYLSSNHIVGEIPLGHGKFSSLIQLILTN 372 (391)
Q Consensus 304 ~~~~~~~~~~~~L~~L~l~~~~i~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~L~~L~l~~ 372 (391)
... .+.++++|+.|++++|++++. ..+..++ +|++|++++|++++ ++ .+.++++|+.|++++
T Consensus 165 ~~~--~l~~l~~L~~L~Ls~n~l~~l--~~l~~l~-~L~~L~Ls~N~lt~-i~-~l~~l~~L~~L~lsn 226 (227)
T d1h6ua2 165 DLT--PLANLSKLTTLKADDNKISDI--SPLASLP-NLIEVHLKNNQISD-VS-PLANTSNLFIVTLTN 226 (227)
T ss_dssp CCG--GGTTCTTCCEEECCSSCCCCC--GGGGGCT-TCCEEECTTSCCCB-CG-GGTTCTTCCEEEEEE
T ss_pred cch--hhcccccceecccCCCccCCC--hhhcCCC-CCCEEECcCCcCCC-Cc-ccccCCCCCEEEeeC
Confidence 322 255667777777777776642 2244443 77777777777663 32 366777777777753
No 16
>d1jl5a_ c.10.2.6 (A:) Leucine rich effector protein YopM {Yersinia pestis [TaxId: 632]}
Probab=99.67 E-value=4.5e-14 Score=122.97 Aligned_cols=291 Identities=29% Similarity=0.283 Sum_probs=153.4
Q ss_pred CCccEEecCCcccccCChhhhhcCCCCCEEEeeCCccCCCCcccccCCCCCceEEecccccccccchhhcccc-cchhhh
Q 039650 45 TSLSYIGISNNLLSGSIPNEVESLKSLSDLRLYNNTLKGSIPSSLGNLTNLVNLHLHINALSGLIPDEIRNLE-FLSDLI 123 (391)
Q Consensus 45 ~~L~~L~l~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~l~~L~~L~l~~~~~~~~~~~~~~~l~-~L~~l~ 123 (391)
.++++|+++++.++ .+|.. .++|++|++++|.++ .+|..+ .+|++|++.++.+.... .++ .|+
T Consensus 38 ~~l~~LdLs~~~L~-~lp~~---~~~L~~L~Ls~N~l~-~lp~~~---~~L~~L~l~~n~l~~l~-----~lp~~L~--- 101 (353)
T d1jl5a_ 38 RQAHELELNNLGLS-SLPEL---PPHLESLVASCNSLT-ELPELP---QSLKSLLVDNNNLKALS-----DLPPLLE--- 101 (353)
T ss_dssp HTCSEEECTTSCCS-CCCSC---CTTCSEEECCSSCCS-SCCCCC---TTCCEEECCSSCCSCCC-----SCCTTCC---
T ss_pred cCCCEEEeCCCCCC-CCCCC---CCCCCEEECCCCCCc-ccccch---hhhhhhhhhhcccchhh-----hhccccc---
Confidence 46899999999987 67753 578999999999998 566543 57899999998776331 111 222
Q ss_pred hceeeeccccccccccccccCCCCCCEEECCCCCCCCCCCCCcCCCCCccEEEcCCCcCCCCCCccccCCCcccEEEccC
Q 039650 124 YNYLIYWINALSDLIPNEIGNLKSLSDLRLDYNTLSGSIPYSFGNLTKLVTLYLDTNALSGSIPDEIRNLKSLFNLQLDN 203 (391)
Q Consensus 124 l~~~~~~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~l~~~~~L~~L~l~~ 203 (391)
.+.+..+.+... + .++.+++|+.++++++.+... +. ....+..+.+..+... ....+..++.++.+.+..
T Consensus 102 --~L~L~~n~l~~l-p-~~~~l~~L~~L~l~~~~~~~~-~~---~~~~l~~l~~~~~~~~--~~~~l~~l~~l~~L~l~~ 171 (353)
T d1jl5a_ 102 --YLGVSNNQLEKL-P-ELQNSSFLKIIDVDNNSLKKL-PD---LPPSLEFIAAGNNQLE--ELPELQNLPFLTAIYADN 171 (353)
T ss_dssp --EEECCSSCCSSC-C-CCTTCTTCCEEECCSSCCSCC-CC---CCTTCCEEECCSSCCS--SCCCCTTCTTCCEEECCS
T ss_pred --cccccccccccc-c-chhhhccceeecccccccccc-cc---ccccccchhhcccccc--ccccccccccceeccccc
Confidence 222233333322 1 133444555555544443311 11 1223334444333222 112233444555555554
Q ss_pred CCCCCCccccccCCCcccEEEccCcccccccchhhccCCCCCEEEcCCCcccCccCccccCCCCccEEEccCCccccccc
Q 039650 204 NTLSGSIPLSLGNLTNLTTLYFSMNALSGSIPNEITNLRSLSDLQLSENTLNGSIPLALGNLTKLVVLYLSINKLSGSIS 283 (391)
Q Consensus 204 ~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~L~~l~l~~~~~~~~~~ 283 (391)
+..... . ......+.+...+..+. . ...+..++.++.+.++++.... .+ ....++..+.+..+.+....
T Consensus 172 n~~~~~-~---~~~~~~~~l~~~~~~~~-~-~~~~~~l~~L~~l~l~~n~~~~-~~---~~~~~l~~~~~~~~~~~~~~- 240 (353)
T d1jl5a_ 172 NSLKKL-P---DLPLSLESIVAGNNILE-E-LPELQNLPFLTTIYADNNLLKT-LP---DLPPSLEALNVRDNYLTDLP- 240 (353)
T ss_dssp SCCSSC-C---CCCTTCCEEECCSSCCS-S-CCCCTTCTTCCEEECCSSCCSS-CC---SCCTTCCEEECCSSCCSCCC-
T ss_pred cccccc-c---ccccccccccccccccc-c-cccccccccccccccccccccc-cc---cccccccccccccccccccc-
Confidence 443311 1 01112233333332222 1 1122345566666666554431 11 22344555555555443211
Q ss_pred cccccCCcccEEEcCCCccCchhhHhhhCCCCccEEEcCCCcccchhHHHHHHhhccccEEEcCCCcccCCCcccccCCc
Q 039650 284 LSYASLTSLTNLYLYENSLCDSIQKEIGDMKSLSILDLSSNKLNGSILLSLANLTNSLKVLYLSSNHIVGEIPLGHGKFS 363 (391)
Q Consensus 284 ~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~L~~L~l~~~~i~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~ 363 (391)
...+.+...++..+.+.... .........++..+.+.+. ...+++|++|++++|++. .++. .++
T Consensus 241 ---~~~~~l~~~~~~~~~~~~l~----~l~~~~~~~~~~~~~~~~~-----~~~~~~L~~L~Ls~N~l~-~lp~---~~~ 304 (353)
T d1jl5a_ 241 ---ELPQSLTFLDVSENIFSGLS----ELPPNLYYLNASSNEIRSL-----CDLPPSLEELNVSNNKLI-ELPA---LPP 304 (353)
T ss_dssp ---CCCTTCCEEECCSSCCSEES----CCCTTCCEEECCSSCCSEE-----CCCCTTCCEEECCSSCCS-CCCC---CCT
T ss_pred ---cccccccccccccccccccc----cccchhcccccccCccccc-----cccCCCCCEEECCCCccC-cccc---ccC
Confidence 12234455555444432210 1123445566666666532 223458999999999988 5554 367
Q ss_pred cccEEEccccccccCCCccccccCCC
Q 039650 364 SLIQLILTNNELSGQLSPELGSLIQL 389 (391)
Q Consensus 364 ~L~~L~l~~~~~~~~~~~~~~~~~~L 389 (391)
+|++|++++|+++ .+|+.+.+++.|
T Consensus 305 ~L~~L~L~~N~L~-~l~~~~~~L~~L 329 (353)
T d1jl5a_ 305 RLERLIASFNHLA-EVPELPQNLKQL 329 (353)
T ss_dssp TCCEEECCSSCCS-CCCCCCTTCCEE
T ss_pred CCCEEECCCCcCC-ccccccCCCCEE
Confidence 8999999999998 788877776655
No 17
>d1xwdc1 c.10.2.7 (C:18-259) Follicle-stimulating hormone receptor {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.66 E-value=1.5e-15 Score=125.21 Aligned_cols=215 Identities=16% Similarity=0.109 Sum_probs=109.9
Q ss_pred cEEeecCCcCCCCCCCCCCCCCCccEEecCCcccccCChhhhhcCCCCCEEEeeCCccCCC-CcccccCCCCCceEEecc
Q 039650 24 NGLSLYSNFLKGSIPPSLGNLTSLSYIGISNNLLSGSIPNEVESLKSLSDLRLYNNTLKGS-IPSSLGNLTNLVNLHLHI 102 (391)
Q Consensus 24 ~~L~l~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~-~~~~~~~l~~L~~L~l~~ 102 (391)
++++.++..++ ..|..+. +++++|++++|.+....+..|.++++|++|++++|.+... .+..|..++.++++.+..
T Consensus 11 ~~i~c~~~~l~-~iP~~l~--~~l~~L~Ls~n~i~~l~~~~f~~l~~L~~L~ls~n~~~~~i~~~~f~~l~~l~~l~~~~ 87 (242)
T d1xwdc1 11 RVFLCQESKVT-EIPSDLP--RNAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDVLEVIEADVFSNLPKLHEIRIEK 87 (242)
T ss_dssp SEEEEESCSCS-SCCSCSC--SCCSEEEEESCCCCEECTTTTTTCTTCCEEEEESCTTCCEECSSSEESCTTCCEEEEEC
T ss_pred CEEEEeCCCCC-CcCCCCC--CCCCEEECcCCcCCccChhHhhccchhhhhhhccccccceeeccccccccccccccccc
Confidence 56666666665 3443332 4677777777776633334566777777777777765532 234566667777766543
Q ss_pred c-ccccccchhhcccccchhhhhceeeeccccccccccccccCCCCCCEEECCCCCCCCCCCC-CcCCCCCccEEEcCCC
Q 039650 103 N-ALSGLIPDEIRNLEFLSDLIYNYLIYWINALSDLIPNEIGNLKSLSDLRLDYNTLSGSIPY-SFGNLTKLVTLYLDTN 180 (391)
Q Consensus 103 ~-~~~~~~~~~~~~l~~L~~l~l~~~~~~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~-~~~~~~~L~~L~l~~~ 180 (391)
+ .+. ...+..|.++++|+.+++.++.+....+. .+..+..+..+...++
T Consensus 88 ~n~l~-----------------------------~~~~~~~~~l~~L~~l~l~~~~l~~~~~~~~~~~l~~l~~~~~~n~ 138 (242)
T d1xwdc1 88 ANNLL-----------------------------YINPEAFQNLPNLQYLLISNTGIKHLPDVHKIHSLQKVLLDIQDNI 138 (242)
T ss_dssp CTTCC-----------------------------EECTTSEECCTTCCEEEEESCCCCSCCCCTTTCBSSCEEEEEESCT
T ss_pred ccccc-----------------------------ccccccccccccccccccchhhhccccccccccccccccccccccc
Confidence 2 222 22334456667777777777766533221 2223344444444555
Q ss_pred cCCCCCCccccCC-CcccEEEccCCCCCCCccccccCCCcccEE-EccCcccccccchhhccCCCCCEEEcCCCcccCcc
Q 039650 181 ALSGSIPDEIRNL-KSLFNLQLDNNTLSGSIPLSLGNLTNLTTL-YFSMNALSGSIPNEITNLRSLSDLQLSENTLNGSI 258 (391)
Q Consensus 181 ~~~~~~~~~l~~~-~~L~~L~l~~~~~~~~~~~~~~~~~~L~~L-~l~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~ 258 (391)
.+.......+..+ ..++.+++.++.+..... .....++++++ .+.++.++......|.++++|+.|++++|.+....
T Consensus 139 ~l~~i~~~~~~~~~~~l~~L~l~~n~l~~i~~-~~~~~~~l~~~~~l~~n~l~~l~~~~f~~l~~L~~L~Ls~N~l~~l~ 217 (242)
T d1xwdc1 139 NIHTIERNSFVGLSFESVILWLNKNGIQEIHN-CAFNGTQLDELNLSDNNNLEELPNDVFHGASGPVILDISRTRIHSLP 217 (242)
T ss_dssp TCCEECTTSSTTSBSSCEEEECCSSCCCEECT-TTTTTCCEEEEECTTCTTCCCCCTTTTTTSCCCSEEECTTSCCCCCC
T ss_pred ccccccccccccccccceeeeccccccccccc-ccccchhhhccccccccccccccHHHhcCCCCCCEEECCCCcCCccC
Confidence 5443333344433 255566666665542222 22223333333 23444444333444555555555555555554333
Q ss_pred CccccCCCCccEE
Q 039650 259 PLALGNLTKLVVL 271 (391)
Q Consensus 259 ~~~~~~~~~L~~l 271 (391)
+..+..+++|+.+
T Consensus 218 ~~~~~~l~~L~~l 230 (242)
T d1xwdc1 218 SYGLENLKKLRAR 230 (242)
T ss_dssp SSSCTTCCEEESS
T ss_pred HHHHcCCcccccC
Confidence 3334444444433
No 18
>d2omxa2 c.10.2.1 (A:37-235) Internalin B {Listeria monocytogenes [TaxId: 1639]}
Probab=99.66 E-value=2.9e-15 Score=119.23 Aligned_cols=95 Identities=32% Similarity=0.396 Sum_probs=40.9
Q ss_pred CCCCCCEEECCCCCCCCCCCCCcCCCCCccEEEcCCCcCCCCCCccccCCCcccEEEccCCCCCCCccccccCCCcccEE
Q 039650 144 NLKSLSDLRLDYNTLSGSIPYSFGNLTKLVTLYLDTNALSGSIPDEIRNLKSLFNLQLDNNTLSGSIPLSLGNLTNLTTL 223 (391)
Q Consensus 144 ~~~~L~~L~l~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~l~~~~~L~~L~l~~~~~~~~~~~~~~~~~~L~~L 223 (391)
++++|+.++++++..... ..+..+++|+.+++.+|.+... ..+..+++++.|++.+|.+.+. ..+.++++|+.|
T Consensus 104 ~l~~L~~L~l~~~~~~~~--~~~~~l~~L~~L~l~~n~l~~~--~~l~~~~~L~~L~l~~n~l~~l--~~l~~l~~L~~L 177 (199)
T d2omxa2 104 NLTNLTGLTLFNNQITDI--DPLKNLTNLNRLELSSNTISDI--SALSGLTSLQQLNFSSNQVTDL--KPLANLTTLERL 177 (199)
T ss_dssp TCTTCSEEECCSSCCCCC--GGGTTCTTCSEEECCSSCCCCC--GGGTTCTTCSEEECCSSCCCCC--GGGTTCTTCCEE
T ss_pred cccccccccccccccccc--cccchhhhhHHhhhhhhhhccc--ccccccccccccccccccccCC--ccccCCCCCCEE
Confidence 334444444444433321 1233444455555544444321 2244445555555555544321 124445555555
Q ss_pred EccCcccccccchhhccCCCCCE
Q 039650 224 YFSMNALSGSIPNEITNLRSLSD 246 (391)
Q Consensus 224 ~l~~~~~~~~~~~~~~~~~~L~~ 246 (391)
++++|.+++. ..+..+++|+.
T Consensus 178 ~ls~N~i~~i--~~l~~L~~L~~ 198 (199)
T d2omxa2 178 DISSNKVSDI--SVLAKLTNLES 198 (199)
T ss_dssp ECCSSCCCCC--GGGGGCTTCSE
T ss_pred ECCCCCCCCC--ccccCCCCCCc
Confidence 5555544421 23444455544
No 19
>d2astb2 c.10.1.3 (B:2136-2419) Cyclin A/CDK2-associated p19, Skp2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.65 E-value=4e-17 Score=137.71 Aligned_cols=234 Identities=19% Similarity=0.172 Sum_probs=152.7
Q ss_pred CCCEEECCCCCCCCCCCCCcCCCCCccEEEcCCCcCCCC-CCccccCCCcccEEEccCCCCCCCccccccCCCcccEEEc
Q 039650 147 SLSDLRLDYNTLSGSIPYSFGNLTKLVTLYLDTNALSGS-IPDEIRNLKSLFNLQLDNNTLSGSIPLSLGNLTNLTTLYF 225 (391)
Q Consensus 147 ~L~~L~l~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~-~~~~l~~~~~L~~L~l~~~~~~~~~~~~~~~~~~L~~L~l 225 (391)
....+.+......... .......+|++|+++++.+... ....+..+++|+.|+++++.+.+.....+..+++|+.|++
T Consensus 24 ~~~~lrl~~~~~~~~~-~~~~~~~~L~~LdLs~~~i~~~~l~~l~~~c~~L~~L~L~~~~l~~~~~~~l~~~~~L~~L~L 102 (284)
T d2astb2 24 GVIAFRCPRSFMDQPL-AEHFSPFRVQHMDLSNSVIEVSTLHGILSQCSKLQNLSLEGLRLSDPIVNTLAKNSNLVRLNL 102 (284)
T ss_dssp TCSEEECTTCEECSCC-CSCCCCBCCCEEECTTCEECHHHHHHHHTTBCCCSEEECTTCBCCHHHHHHHTTCTTCSEEEC
T ss_pred cceEeeccccccccch-hhhccCCCCCEEECCCCccCHHHHHHHHHhCCCcccccccccCCCcHHHHHHhcCCCCcCccc
Confidence 3455566554433222 2233456899999988877532 2344678899999999999877666677778899999999
Q ss_pred cCc-ccccccc-hhhccCCCCCEEEcCCCcc-cCc-cCccc-cCCCCccEEEccCCc--cccc-cccccccCCcccEEEc
Q 039650 226 SMN-ALSGSIP-NEITNLRSLSDLQLSENTL-NGS-IPLAL-GNLTKLVVLYLSINK--LSGS-ISLSYASLTSLTNLYL 297 (391)
Q Consensus 226 ~~~-~~~~~~~-~~~~~~~~L~~L~l~~~~~-~~~-~~~~~-~~~~~L~~l~l~~~~--~~~~-~~~~~~~~~~L~~L~l 297 (391)
++| .++.... .....+++|++|++++|.. ++. ....+ ..+++|+.++++++. +++. .......+++|++|++
T Consensus 103 s~c~~itd~~l~~l~~~~~~L~~L~ls~c~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~i~~~~l~~l~~~~~~L~~L~L 182 (284)
T d2astb2 103 SGCSGFSEFALQTLLSSCSRLDELNLSWCFDFTEKHVQVAVAHVSETITQLNLSGYRKNLQKSDLSTLVRRCPNLVHLDL 182 (284)
T ss_dssp TTCBSCCHHHHHHHHHHCTTCCEEECCCCTTCCHHHHHHHHHHSCTTCCEEECCSCGGGSCHHHHHHHHHHCTTCSEEEC
T ss_pred cccccccccccchhhHHHHhccccccccccccccccchhhhcccccccchhhhccccccccccccccccccccccccccc
Confidence 886 4443222 2335688999999988743 211 11122 235789999998763 3322 2223356789999999
Q ss_pred CCCc-cCchhhHhhhCCCCccEEEcCCC-cccchhHHHHHHhhccccEEEcCCCcccCCCcccc-cCCccccEEEccccc
Q 039650 298 YENS-LCDSIQKEIGDMKSLSILDLSSN-KLNGSILLSLANLTNSLKVLYLSSNHIVGEIPLGH-GKFSSLIQLILTNNE 374 (391)
Q Consensus 298 ~~~~-~~~~~~~~~~~~~~L~~L~l~~~-~i~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~-~~~~~L~~L~l~~~~ 374 (391)
++|. +++.....+..+++|+.|++++| .+++.....+..++ +|+.|++++| +.+.....+ ..+|+|+ +..+.
T Consensus 183 ~~~~~itd~~~~~l~~~~~L~~L~L~~C~~i~~~~l~~L~~~~-~L~~L~l~~~-~~d~~l~~l~~~lp~L~---i~~~~ 257 (284)
T d2astb2 183 SDSVMLKNDCFQEFFQLNYLQHLSLSRCYDIIPETLLELGEIP-TLKTLQVFGI-VPDGTLQLLKEALPHLQ---INCSH 257 (284)
T ss_dssp TTCTTCCGGGGGGGGGCTTCCEEECTTCTTCCGGGGGGGGGCT-TCCEEECTTS-SCTTCHHHHHHHSTTSE---ESCCC
T ss_pred ccccCCCchhhhhhcccCcCCEEECCCCCCCChHHHHHHhcCC-CCCEEeeeCC-CCHHHHHHHHHhCcccc---ccCcc
Confidence 8875 56566677788899999999986 68777777777665 8999999988 443332222 4566655 45556
Q ss_pred cccCCCcccccc
Q 039650 375 LSGQLSPELGSL 386 (391)
Q Consensus 375 ~~~~~~~~~~~~ 386 (391)
++...+..+++.
T Consensus 258 ls~~~~~~~~~~ 269 (284)
T d2astb2 258 FTTIARPTIGNK 269 (284)
T ss_dssp SCCTTCSSCSST
T ss_pred CCCCCCCccCcc
Confidence 665555554443
No 20
>d1xwdc1 c.10.2.7 (C:18-259) Follicle-stimulating hormone receptor {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.65 E-value=8.4e-16 Score=126.70 Aligned_cols=219 Identities=16% Similarity=0.121 Sum_probs=140.2
Q ss_pred CEEECCCCCCCCCCCCCcCCCCCccEEEcCCCcCCCCCCccccCCCcccEEEccCCCCCCC-ccccccCCCcccEEEccC
Q 039650 149 SDLRLDYNTLSGSIPYSFGNLTKLVTLYLDTNALSGSIPDEIRNLKSLFNLQLDNNTLSGS-IPLSLGNLTNLTTLYFSM 227 (391)
Q Consensus 149 ~~L~l~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~l~~~~~L~~L~l~~~~~~~~-~~~~~~~~~~L~~L~l~~ 227 (391)
+.++.++..++ .+|..+. +++++|++++|.+.......|.++++|+.|++++|.+... ....|..++.++++.+..
T Consensus 11 ~~i~c~~~~l~-~iP~~l~--~~l~~L~Ls~n~i~~l~~~~f~~l~~L~~L~ls~n~~~~~i~~~~f~~l~~l~~l~~~~ 87 (242)
T d1xwdc1 11 RVFLCQESKVT-EIPSDLP--RNAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDVLEVIEADVFSNLPKLHEIRIEK 87 (242)
T ss_dssp SEEEEESCSCS-SCCSCSC--SCCSEEEEESCCCCEECTTTTTTCTTCCEEEEESCTTCCEECSSSEESCTTCCEEEEEC
T ss_pred CEEEEeCCCCC-CcCCCCC--CCCCEEECcCCcCCccChhHhhccchhhhhhhccccccceeeccccccccccccccccc
Confidence 45666666665 3444332 4678888888877654455677788888888887766532 234566777788777654
Q ss_pred -cccccccchhhccCCCCCEEEcCCCcccCccCc-cccCCCCccEEEccCCccccccccccccCC-cccEEEcCCCccCc
Q 039650 228 -NALSGSIPNEITNLRSLSDLQLSENTLNGSIPL-ALGNLTKLVVLYLSINKLSGSISLSYASLT-SLTNLYLYENSLCD 304 (391)
Q Consensus 228 -~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~-~~~~~~~L~~l~l~~~~~~~~~~~~~~~~~-~L~~L~l~~~~~~~ 304 (391)
+.+....+..|..+++|+.++++++.+...... .+..+..+......++.+.......+.+++ .++.+++++|.+..
T Consensus 88 ~n~l~~~~~~~~~~l~~L~~l~l~~~~l~~~~~~~~~~~l~~l~~~~~~n~~l~~i~~~~~~~~~~~l~~L~l~~n~l~~ 167 (242)
T d1xwdc1 88 ANNLLYINPEAFQNLPNLQYLLISNTGIKHLPDVHKIHSLQKVLLDIQDNINIHTIERNSFVGLSFESVILWLNKNGIQE 167 (242)
T ss_dssp CTTCCEECTTSEECCTTCCEEEEESCCCCSCCCCTTTCBSSCEEEEEESCTTCCEECTTSSTTSBSSCEEEECCSSCCCE
T ss_pred cccccccccccccccccccccccchhhhcccccccccccccccccccccccccccccccccccccccceeeecccccccc
Confidence 355555666777888888888888877533221 233345555556666666655555555543 67888888888866
Q ss_pred hhhHhhhCCCCccEE-EcCCCcccchhHHHHHHhhccccEEEcCCCcccCCCcccccCCccccEEEccc
Q 039650 305 SIQKEIGDMKSLSIL-DLSSNKLNGSILLSLANLTNSLKVLYLSSNHIVGEIPLGHGKFSSLIQLILTN 372 (391)
Q Consensus 305 ~~~~~~~~~~~L~~L-~l~~~~i~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~L~~L~l~~ 372 (391)
.....+ ..++++++ .+.+|+++...+..+..+. +|++|++++|+++...+..+.+++.|+.+++.+
T Consensus 168 i~~~~~-~~~~l~~~~~l~~n~l~~l~~~~f~~l~-~L~~L~Ls~N~l~~l~~~~~~~l~~L~~l~~~~ 234 (242)
T d1xwdc1 168 IHNCAF-NGTQLDELNLSDNNNLEELPNDVFHGAS-GPVILDISRTRIHSLPSYGLENLKKLRARSTYN 234 (242)
T ss_dssp ECTTTT-TTCCEEEEECTTCTTCCCCCTTTTTTSC-CCSEEECTTSCCCCCCSSSCTTCCEEESSSEES
T ss_pred cccccc-cchhhhccccccccccccccHHHhcCCC-CCCEEECCCCcCCccCHHHHcCCcccccCcCCC
Confidence 544444 34555555 4577777743333444444 899999999988855556677777777766654
No 21
>d1h6ta2 c.10.2.1 (A:31-240) Internalin B {Listeria monocytogenes [TaxId: 1639]}
Probab=99.65 E-value=3e-15 Score=120.14 Aligned_cols=98 Identities=33% Similarity=0.480 Sum_probs=41.5
Q ss_pred CCCCCEEECCCCCCCCCCCCCcCCCCCccEEEcCCCcCCCCCCccccCCCcccEEEccCCCCCCCccccccCCCcccEEE
Q 039650 145 LKSLSDLRLDYNTLSGSIPYSFGNLTKLVTLYLDTNALSGSIPDEIRNLKSLFNLQLDNNTLSGSIPLSLGNLTNLTTLY 224 (391)
Q Consensus 145 ~~~L~~L~l~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~l~~~~~L~~L~l~~~~~~~~~~~~~~~~~~L~~L~ 224 (391)
+++|+.|+++++.+... ..+..+++++.+++.++.+.+ ...+..+++|+.+++++|.+.+. ..+.++++|+.|+
T Consensus 111 l~~L~~L~l~~~~~~~~--~~l~~l~~l~~l~~~~n~l~~--~~~~~~l~~L~~l~l~~n~l~~i--~~l~~l~~L~~L~ 184 (210)
T d1h6ta2 111 LKKLKSLSLEHNGISDI--NGLVHLPQLESLYLGNNKITD--ITVLSRLTKLDTLSLEDNQISDI--VPLAGLTKLQNLY 184 (210)
T ss_dssp CTTCCEEECTTSCCCCC--GGGGGCTTCCEEECCSSCCCC--CGGGGGCTTCSEEECCSSCCCCC--GGGTTCTTCCEEE
T ss_pred ccccccccccccccccc--ccccccccccccccccccccc--ccccccccccccccccccccccc--ccccCCCCCCEEE
Confidence 34444444444433311 123344444444444444432 12233444455555555444321 1244445555555
Q ss_pred ccCcccccccchhhccCCCCCEEEcC
Q 039650 225 FSMNALSGSIPNEITNLRSLSDLQLS 250 (391)
Q Consensus 225 l~~~~~~~~~~~~~~~~~~L~~L~l~ 250 (391)
+++|.++.. ..+..+++|+.|+++
T Consensus 185 Ls~N~i~~l--~~l~~l~~L~~L~Ls 208 (210)
T d1h6ta2 185 LSKNHISDL--RALAGLKNLDVLELF 208 (210)
T ss_dssp CCSSCCCBC--GGGTTCTTCSEEEEE
T ss_pred CCCCCCCCC--hhhcCCCCCCEEEcc
Confidence 555544321 134445555555543
No 22
>d2omxa2 c.10.2.1 (A:37-235) Internalin B {Listeria monocytogenes [TaxId: 1639]}
Probab=99.63 E-value=2.4e-15 Score=119.67 Aligned_cols=159 Identities=32% Similarity=0.455 Sum_probs=85.0
Q ss_pred CCcccEEEccCcccccccchhhccCCCCCEEEcCCCcccCccCccccCCCCccEEEccCCccccccccccccCCcccEEE
Q 039650 217 LTNLTTLYFSMNALSGSIPNEITNLRSLSDLQLSENTLNGSIPLALGNLTKLVVLYLSINKLSGSISLSYASLTSLTNLY 296 (391)
Q Consensus 217 ~~~L~~L~l~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~L~~l~l~~~~~~~~~~~~~~~~~~L~~L~ 296 (391)
++++++|++.++.++.. ..+..+++|+.|++++|.+.+.. .+..+++|+++++++|.+.... .+..++.|+.++
T Consensus 39 l~~l~~L~l~~~~i~~l--~~l~~l~nL~~L~Ls~N~l~~~~--~l~~l~~L~~L~l~~n~~~~~~--~l~~l~~L~~L~ 112 (199)
T d2omxa2 39 LDQVTTLQADRLGIKSI--DGVEYLNNLTQINFSNNQLTDIT--PLKNLTKLVDILMNNNQIADIT--PLANLTNLTGLT 112 (199)
T ss_dssp HTTCCEEECTTSCCCCC--TTGGGCTTCCEEECCSSCCCCCG--GGTTCTTCCEEECCSSCCCCCG--GGTTCTTCSEEE
T ss_pred hcCCCEEECCCCCCCCc--cccccCCCcCcCccccccccCcc--cccCCccccccccccccccccc--cccccccccccc
Confidence 34555555555544421 22445556666666666554322 2455666666666666554322 244556666666
Q ss_pred cCCCccCchhhHhhhCCCCccEEEcCCCcccchhHHHHHHhhccccEEEcCCCcccCCCcccccCCccccEEEccccccc
Q 039650 297 LYENSLCDSIQKEIGDMKSLSILDLSSNKLNGSILLSLANLTNSLKVLYLSSNHIVGEIPLGHGKFSSLIQLILTNNELS 376 (391)
Q Consensus 297 l~~~~~~~~~~~~~~~~~~L~~L~l~~~~i~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~ 376 (391)
++++..... ..+..+++|+.+++++|++.. . ..+.... +++.|++.+|++++. ..+.++++|++|++++|+++
T Consensus 113 l~~~~~~~~--~~~~~l~~L~~L~l~~n~l~~-~-~~l~~~~-~L~~L~l~~n~l~~l--~~l~~l~~L~~L~ls~N~i~ 185 (199)
T d2omxa2 113 LFNNQITDI--DPLKNLTNLNRLELSSNTISD-I-SALSGLT-SLQQLNFSSNQVTDL--KPLANLTTLERLDISSNKVS 185 (199)
T ss_dssp CCSSCCCCC--GGGTTCTTCSEEECCSSCCCC-C-GGGTTCT-TCSEEECCSSCCCCC--GGGTTCTTCCEEECCSSCCC
T ss_pred ccccccccc--cccchhhhhHHhhhhhhhhcc-c-ccccccc-cccccccccccccCC--ccccCCCCCCEEECCCCCCC
Confidence 666655332 234556666666666666542 1 2233333 666666666666532 23566666777777776665
Q ss_pred cCCCccccccCCCc
Q 039650 377 GQLSPELGSLIQLE 390 (391)
Q Consensus 377 ~~~~~~~~~~~~L~ 390 (391)
.++ .++.+++||
T Consensus 186 -~i~-~l~~L~~L~ 197 (199)
T d2omxa2 186 -DIS-VLAKLTNLE 197 (199)
T ss_dssp -CCG-GGGGCTTCS
T ss_pred -CCc-cccCCCCCC
Confidence 343 355566655
No 23
>d1h6ta2 c.10.2.1 (A:31-240) Internalin B {Listeria monocytogenes [TaxId: 1639]}
Probab=99.63 E-value=4.3e-15 Score=119.21 Aligned_cols=178 Identities=28% Similarity=0.373 Sum_probs=130.5
Q ss_pred ccCccCCCchhhhhcCCcccEEeecCCcCCCCCCCCCCCCCCccEEecCCcccccCChhhhhcCCCCCEEEeeCCccCCC
Q 039650 5 SKNQLSGLIPHEIGRLSSFNGLSLYSNFLKGSIPPSLGNLTSLSYIGISNNLLSGSIPNEVESLKSLSDLRLYNNTLKGS 84 (391)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~ 84 (391)
....+++.... .++.+|+.|+++++.+.+ ++ .++.+++|++|++++|.+.+ ++ .+..+++|++|++++|+++ .
T Consensus 32 ~~~~~~~~~~~--~~L~~L~~L~l~~~~i~~-l~-~l~~l~~L~~L~L~~n~i~~-l~-~~~~l~~L~~L~l~~n~i~-~ 104 (210)
T d1h6ta2 32 KKKSVTDAVTQ--NELNSIDQIIANNSDIKS-VQ-GIQYLPNVTKLFLNGNKLTD-IK-PLANLKNLGWLFLDENKVK-D 104 (210)
T ss_dssp TCSCTTSEECH--HHHHTCCEEECTTSCCCC-CT-TGGGCTTCCEEECCSSCCCC-CG-GGTTCTTCCEEECCSSCCC-C
T ss_pred CcCccCCccCH--HHhcCccEEECcCCCCCC-ch-hHhhCCCCCEEeCCCccccC-cc-ccccCcccccccccccccc-c
Confidence 34444443332 357799999999998874 33 48899999999999999874 44 3678999999999999988 3
Q ss_pred CcccccCCCCCceEEecccccccccchhhcccccchhhhhceeeeccccccccccccccCCCCCCEEECCCCCCCCCCCC
Q 039650 85 IPSSLGNLTNLVNLHLHINALSGLIPDEIRNLEFLSDLIYNYLIYWINALSDLIPNEIGNLKSLSDLRLDYNTLSGSIPY 164 (391)
Q Consensus 85 ~~~~~~~l~~L~~L~l~~~~~~~~~~~~~~~l~~L~~l~l~~~~~~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~ 164 (391)
++ .+..+++|+++++.++.+... ..+..+++++.++++++.++.. .
T Consensus 105 l~-~l~~l~~L~~L~l~~~~~~~~-------------------------------~~l~~l~~l~~l~~~~n~l~~~--~ 150 (210)
T d1h6ta2 105 LS-SLKDLKKLKSLSLEHNGISDI-------------------------------NGLVHLPQLESLYLGNNKITDI--T 150 (210)
T ss_dssp GG-GGTTCTTCCEEECTTSCCCCC-------------------------------GGGGGCTTCCEEECCSSCCCCC--G
T ss_pred cc-ccccccccccccccccccccc-------------------------------cccccccccccccccccccccc--c
Confidence 44 588899999999999876521 1244567778888877776632 3
Q ss_pred CcCCCCCccEEEcCCCcCCCCCCccccCCCcccEEEccCCCCCCCccccccCCCcccEEEccC
Q 039650 165 SFGNLTKLVTLYLDTNALSGSIPDEIRNLKSLFNLQLDNNTLSGSIPLSLGNLTNLTTLYFSM 227 (391)
Q Consensus 165 ~~~~~~~L~~L~l~~~~~~~~~~~~l~~~~~L~~L~l~~~~~~~~~~~~~~~~~~L~~L~l~~ 227 (391)
.+..+++|+.+++.+|.+.+. ..+..+++|+.|++++|.+.+ . ..+..+++|+.|++++
T Consensus 151 ~~~~l~~L~~l~l~~n~l~~i--~~l~~l~~L~~L~Ls~N~i~~-l-~~l~~l~~L~~L~Ls~ 209 (210)
T d1h6ta2 151 VLSRLTKLDTLSLEDNQISDI--VPLAGLTKLQNLYLSKNHISD-L-RALAGLKNLDVLELFS 209 (210)
T ss_dssp GGGGCTTCSEEECCSSCCCCC--GGGTTCTTCCEEECCSSCCCB-C-GGGTTCTTCSEEEEEE
T ss_pred ccccccccccccccccccccc--ccccCCCCCCEEECCCCCCCC-C-hhhcCCCCCCEEEccC
Confidence 455677888888888877643 236778888888888887763 2 3477788888888753
No 24
>d2astb2 c.10.1.3 (B:2136-2419) Cyclin A/CDK2-associated p19, Skp2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.60 E-value=1.3e-15 Score=128.21 Aligned_cols=239 Identities=21% Similarity=0.178 Sum_probs=162.9
Q ss_pred CEEECCCCCCCCCCCCCcCCCCCccEEEcCCCcCCCCCCccccCCCcccEEEccCCCCCCC-ccccccCCCcccEEEccC
Q 039650 149 SDLRLDYNTLSGSIPYSFGNLTKLVTLYLDTNALSGSIPDEIRNLKSLFNLQLDNNTLSGS-IPLSLGNLTNLTTLYFSM 227 (391)
Q Consensus 149 ~~L~l~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~l~~~~~L~~L~l~~~~~~~~-~~~~~~~~~~L~~L~l~~ 227 (391)
+.+|++++.+.......+.. .....+.+....... .........+|+.|+++++.+... ....+..+++|++|.+.+
T Consensus 3 ~~lDLs~~~l~~~~l~~l~~-~~~~~lrl~~~~~~~-~~~~~~~~~~L~~LdLs~~~i~~~~l~~l~~~c~~L~~L~L~~ 80 (284)
T d2astb2 3 QTLDLTGKNLHPDVTGRLLS-QGVIAFRCPRSFMDQ-PLAEHFSPFRVQHMDLSNSVIEVSTLHGILSQCSKLQNLSLEG 80 (284)
T ss_dssp SEEECTTCBCCHHHHHHHHH-TTCSEEECTTCEECS-CCCSCCCCBCCCEEECTTCEECHHHHHHHHTTBCCCSEEECTT
T ss_pred CEEECCCCCCCchHHHHHHh-ccceEeecccccccc-chhhhccCCCCCEEECCCCccCHHHHHHHHHhCCCcccccccc
Confidence 36788776553211111111 234556665544432 222233556899999999877533 234467889999999999
Q ss_pred cccccccchhhccCCCCCEEEcCCCc-ccCc-cCccccCCCCccEEEccCCc-ccccc-cccc-ccCCcccEEEcCCCc-
Q 039650 228 NALSGSIPNEITNLRSLSDLQLSENT-LNGS-IPLALGNLTKLVVLYLSINK-LSGSI-SLSY-ASLTSLTNLYLYENS- 301 (391)
Q Consensus 228 ~~~~~~~~~~~~~~~~L~~L~l~~~~-~~~~-~~~~~~~~~~L~~l~l~~~~-~~~~~-~~~~-~~~~~L~~L~l~~~~- 301 (391)
+.++......++.+++|+.|++++|. +++. .......+++|++|++++|. +++.. ...+ ..++.|+.|+++++.
T Consensus 81 ~~l~~~~~~~l~~~~~L~~L~Ls~c~~itd~~l~~l~~~~~~L~~L~ls~c~~~~~~~~~~~~~~~~~~L~~L~l~~~~~ 160 (284)
T d2astb2 81 LRLSDPIVNTLAKNSNLVRLNLSGCSGFSEFALQTLLSSCSRLDELNLSWCFDFTEKHVQVAVAHVSETITQLNLSGYRK 160 (284)
T ss_dssp CBCCHHHHHHHTTCTTCSEEECTTCBSCCHHHHHHHHHHCTTCCEEECCCCTTCCHHHHHHHHHHSCTTCCEEECCSCGG
T ss_pred cCCCcHHHHHHhcCCCCcCccccccccccccccchhhHHHHhccccccccccccccccchhhhcccccccchhhhccccc
Confidence 98877777788889999999999974 4321 12234578999999999974 43221 1122 335789999999874
Q ss_pred -cCch-hhHhhhCCCCccEEEcCCC-cccchhHHHHHHhhccccEEEcCCC-cccCCCcccccCCccccEEEcccccccc
Q 039650 302 -LCDS-IQKEIGDMKSLSILDLSSN-KLNGSILLSLANLTNSLKVLYLSSN-HIVGEIPLGHGKFSSLIQLILTNNELSG 377 (391)
Q Consensus 302 -~~~~-~~~~~~~~~~L~~L~l~~~-~i~~~~~~~~~~~~~~L~~L~l~~~-~~~~~~~~~~~~~~~L~~L~l~~~~~~~ 377 (391)
+++. .......+|+|++|++++| .+++..+..+..++ +|++|++++| .+++.....+.++|+|+.|++++|--.+
T Consensus 161 ~i~~~~l~~l~~~~~~L~~L~L~~~~~itd~~~~~l~~~~-~L~~L~L~~C~~i~~~~l~~L~~~~~L~~L~l~~~~~d~ 239 (284)
T d2astb2 161 NLQKSDLSTLVRRCPNLVHLDLSDSVMLKNDCFQEFFQLN-YLQHLSLSRCYDIIPETLLELGEIPTLKTLQVFGIVPDG 239 (284)
T ss_dssp GSCHHHHHHHHHHCTTCSEEECTTCTTCCGGGGGGGGGCT-TCCEEECTTCTTCCGGGGGGGGGCTTCCEEECTTSSCTT
T ss_pred ccccccccccccccccccccccccccCCCchhhhhhcccC-cCCEEECCCCCCCChHHHHHHhcCCCCCEEeeeCCCCHH
Confidence 4433 3334467999999999987 58877888887765 9999999998 5776667778899999999999993333
Q ss_pred CCCccccccCCCc
Q 039650 378 QLSPELGSLIQLE 390 (391)
Q Consensus 378 ~~~~~~~~~~~L~ 390 (391)
.++.....+++|+
T Consensus 240 ~l~~l~~~lp~L~ 252 (284)
T d2astb2 240 TLQLLKEALPHLQ 252 (284)
T ss_dssp CHHHHHHHSTTSE
T ss_pred HHHHHHHhCcccc
Confidence 4444445666664
No 25
>d2ca6a1 c.10.1.2 (A:2-345) Rna1p (RanGAP1), N-terminal domain {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}
Probab=99.58 E-value=7.7e-16 Score=133.88 Aligned_cols=239 Identities=17% Similarity=0.151 Sum_probs=159.3
Q ss_pred cccccCCCCCCEEECCCCCCCCC----CCCCcCCCCCccEEEcCCCcCCCC----------CCccccCCCcccEEEccCC
Q 039650 139 PNEIGNLKSLSDLRLDYNTLSGS----IPYSFGNLTKLVTLYLDTNALSGS----------IPDEIRNLKSLFNLQLDNN 204 (391)
Q Consensus 139 ~~~~~~~~~L~~L~l~~~~~~~~----~~~~~~~~~~L~~L~l~~~~~~~~----------~~~~l~~~~~L~~L~l~~~ 204 (391)
...+.+...++.|++++|.+... +...+...++|+.+++.++..... ....+..+++|+.|++++|
T Consensus 24 ~~~L~~~~~l~~L~Ls~n~i~~~~~~~l~~~l~~~~~L~~l~l~~~~~~~~~~~~~~~~~~l~~~l~~~~~L~~L~L~~n 103 (344)
T d2ca6a1 24 FAVLLEDDSVKEIVLSGNTIGTEAARWLSENIASKKDLEIAEFSDIFTGRVKDEIPEALRLLLQALLKCPKLHTVRLSDN 103 (344)
T ss_dssp SHHHHHCSCCCEEECTTSEECHHHHHHHHHTTTTCTTCCEEECCSCCTTSCGGGSHHHHHHHHHHHTTCTTCCEEECCSC
T ss_pred HHHHhhCCCCCEEECcCCcCCHHHHHHHHHHHHhCCCCCEEECCCCcccccccccchHHHHHHHHHhhCCCccccccccc
Confidence 34455667788888887765422 223455667788888876654311 1123455678888888888
Q ss_pred CCCCCcc----ccccCCCcccEEEccCcccccccch-------------hhccCCCCCEEEcCCCcccCcc----Ccccc
Q 039650 205 TLSGSIP----LSLGNLTNLTTLYFSMNALSGSIPN-------------EITNLRSLSDLQLSENTLNGSI----PLALG 263 (391)
Q Consensus 205 ~~~~~~~----~~~~~~~~L~~L~l~~~~~~~~~~~-------------~~~~~~~L~~L~l~~~~~~~~~----~~~~~ 263 (391)
.+..... ..+...++|+.|.+++|.+...... .....+.|+.+.++++.+.... ...+.
T Consensus 104 ~i~~~~~~~l~~~l~~~~~L~~L~l~~n~l~~~~~~~l~~~l~~~~~~~~~~~~~~L~~l~l~~n~i~~~~~~~l~~~l~ 183 (344)
T d2ca6a1 104 AFGPTAQEPLIDFLSKHTPLEHLYLHNNGLGPQAGAKIARALQELAVNKKAKNAPPLRSIICGRNRLENGSMKEWAKTFQ 183 (344)
T ss_dssp CCCTTTHHHHHHHHHHCTTCCEEECCSSCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCEEECCSSCCTGGGHHHHHHHHH
T ss_pred ccccccccchhhhhcccccchheecccccccccccccccccccccccccccccCcccceeecccccccccccccccchhh
Confidence 7764422 2334567888888888765421111 1134578888998888765322 22345
Q ss_pred CCCCccEEEccCCccccc-----cccccccCCcccEEEcCCCccCch----hhHhhhCCCCccEEEcCCCcccchhHHHH
Q 039650 264 NLTKLVVLYLSINKLSGS-----ISLSYASLTSLTNLYLYENSLCDS----IQKEIGDMKSLSILDLSSNKLNGSILLSL 334 (391)
Q Consensus 264 ~~~~L~~l~l~~~~~~~~-----~~~~~~~~~~L~~L~l~~~~~~~~----~~~~~~~~~~L~~L~l~~~~i~~~~~~~~ 334 (391)
.++.++.+++++|.+... ....+..+++|+.|++++|.++.. ....+..+++|+.|++++|.+++.+...+
T Consensus 184 ~~~~L~~L~L~~n~i~~~g~~~~l~~~l~~~~~L~~L~Ls~N~i~~~g~~~L~~~l~~~~~L~~L~Ls~n~i~~~g~~~l 263 (344)
T d2ca6a1 184 SHRLLHTVKMVQNGIRPEGIEHLLLEGLAYCQELKVLDLQDNTFTHLGSSALAIALKSWPNLRELGLNDCLLSARGAAAV 263 (344)
T ss_dssp HCTTCCEEECCSSCCCHHHHHHHHHTTGGGCTTCCEEECCSSCCHHHHHHHHHHHGGGCTTCCEEECTTCCCCHHHHHHH
T ss_pred hhhhhcccccccccccccccccchhhhhcchhhhcccccccccccccccccccccccccccchhhhhhcCccCchhhHHH
Confidence 678899999999887632 233456778899999999987543 33456688999999999999988777766
Q ss_pred HHhh-----ccccEEEcCCCcccCC----Cccccc-CCccccEEEcccccccc
Q 039650 335 ANLT-----NSLKVLYLSSNHIVGE----IPLGHG-KFSSLIQLILTNNELSG 377 (391)
Q Consensus 335 ~~~~-----~~L~~L~l~~~~~~~~----~~~~~~-~~~~L~~L~l~~~~~~~ 377 (391)
.... ++|++|++++|.+++. +...+. +++.|++|++++|.+..
T Consensus 264 ~~~l~~~~~~~L~~L~ls~N~i~~~~~~~l~~~l~~~~~~L~~L~l~~N~~~~ 316 (344)
T d2ca6a1 264 VDAFSKLENIGLQTLRLQYNEIELDAVRTLKTVIDEKMPDLLFLELNGNRFSE 316 (344)
T ss_dssp HHHHHTCSSCCCCEEECCSSCCBHHHHHHHHHHHHHHCTTCCEEECTTSBSCT
T ss_pred HHHhhhccCCCCCEEECCCCcCChHHHHHHHHHHHccCCCCCEEECCCCcCCC
Confidence 5532 3688999999988754 233343 57889999999998863
No 26
>d1w8aa_ c.10.2.7 (A:) Slit {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Probab=99.57 E-value=9.5e-15 Score=115.43 Aligned_cols=172 Identities=24% Similarity=0.270 Sum_probs=119.7
Q ss_pred cEEEccCCCCCCCccccccCCCcccEEEccCccccc-ccchhhccCCCCCEEEcCCCcccCccCccccCCCCccEEEccC
Q 039650 197 FNLQLDNNTLSGSIPLSLGNLTNLTTLYFSMNALSG-SIPNEITNLRSLSDLQLSENTLNGSIPLALGNLTKLVVLYLSI 275 (391)
Q Consensus 197 ~~L~l~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~-~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~L~~l~l~~ 275 (391)
+.++.+++.++ ..|..+ .+.+++|++++|.++. .....|..+++|+.|+++++.+....+..+..+++|++|++++
T Consensus 11 ~~v~Cs~~~L~-~iP~~l--p~~l~~L~Ls~N~i~~~~~~~~f~~l~~L~~L~L~~N~i~~~~~~~~~~~~~L~~L~Ls~ 87 (192)
T d1w8aa_ 11 TTVDCTGRGLK-EIPRDI--PLHTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGE 87 (192)
T ss_dssp TEEECTTSCCS-SCCSCC--CTTCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCS
T ss_pred CEEEEeCCCcC-ccCCCC--CCCCCEEEeCCCCCcccccccccCCCceEeeeeccccccccccccccccccccceeeecc
Confidence 45666666665 344433 2567778888777753 4456677788888888888888777777778888888888888
Q ss_pred CccccccccccccCCcccEEEcCCCccCchhhHhhhCCCCccEEEcCCCcccchh-HHHHHHhhccccEEEcCCCcccCC
Q 039650 276 NKLSGSISLSYASLTSLTNLYLYENSLCDSIQKEIGDMKSLSILDLSSNKLNGSI-LLSLANLTNSLKVLYLSSNHIVGE 354 (391)
Q Consensus 276 ~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~L~~L~l~~~~i~~~~-~~~~~~~~~~L~~L~l~~~~~~~~ 354 (391)
|++....+..|.++++|+.|++++|.+....+..|..+++|+++++++|.+.... ..++.. .++.+.+..+.++-.
T Consensus 88 N~l~~l~~~~F~~l~~L~~L~L~~N~l~~i~~~~f~~l~~L~~l~L~~N~~~~~~~~~~~~~---~l~~~~l~~~~~~c~ 164 (192)
T d1w8aa_ 88 NKIKEISNKMFLGLHQLKTLNLYDNQISCVMPGSFEHLNSLTSLNLASNPFNCNCHLAWFAE---WLRKKSLNGGAARCG 164 (192)
T ss_dssp CCCCEECSSSSTTCTTCCEEECCSSCCCEECTTSSTTCTTCCEEECTTCCBCCSGGGHHHHH---HHHHHCCSGGGCBBC
T ss_pred ccccccCHHHHhCCCcccccccCCccccccCHHHhcCCcccccccccccccccccchHHHhh---hhhhhcccCCCeEeC
Confidence 8888777777888888888888888887777778888888888888888876322 222222 355566666665544
Q ss_pred CcccccCCccccEEEcccccccc
Q 039650 355 IPLGHGKFSSLIQLILTNNELSG 377 (391)
Q Consensus 355 ~~~~~~~~~~L~~L~l~~~~~~~ 377 (391)
.|.. +.+++.++++.+.+..
T Consensus 165 ~p~~---l~~~~l~~L~~n~l~C 184 (192)
T d1w8aa_ 165 APSK---VRDVQIKDLPHSEFKC 184 (192)
T ss_dssp SSTT---TTTSBGGGSCTTTCCC
T ss_pred CChh---hcCCEeeecCHhhCcC
Confidence 4443 3445566777777663
No 27
>d2ca6a1 c.10.1.2 (A:2-345) Rna1p (RanGAP1), N-terminal domain {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}
Probab=99.57 E-value=2.4e-15 Score=130.70 Aligned_cols=138 Identities=20% Similarity=0.216 Sum_probs=91.6
Q ss_pred CCCcccEEEccCcccccc----cchhhccCCCCCEEEcCCCcccCc-----cCccccCCCCccEEEccCCccccc----c
Q 039650 216 NLTNLTTLYFSMNALSGS----IPNEITNLRSLSDLQLSENTLNGS-----IPLALGNLTKLVVLYLSINKLSGS----I 282 (391)
Q Consensus 216 ~~~~L~~L~l~~~~~~~~----~~~~~~~~~~L~~L~l~~~~~~~~-----~~~~~~~~~~L~~l~l~~~~~~~~----~ 282 (391)
..+.|+.+.++++.+... ....+..++.++.|++++|.+... ....+..+++|++|++++|.++.. .
T Consensus 156 ~~~~L~~l~l~~n~i~~~~~~~l~~~l~~~~~L~~L~L~~n~i~~~g~~~~l~~~l~~~~~L~~L~Ls~N~i~~~g~~~L 235 (344)
T d2ca6a1 156 NAPPLRSIICGRNRLENGSMKEWAKTFQSHRLLHTVKMVQNGIRPEGIEHLLLEGLAYCQELKVLDLQDNTFTHLGSSAL 235 (344)
T ss_dssp TCCCCCEEECCSSCCTGGGHHHHHHHHHHCTTCCEEECCSSCCCHHHHHHHHHTTGGGCTTCCEEECCSSCCHHHHHHHH
T ss_pred cCcccceeecccccccccccccccchhhhhhhhcccccccccccccccccchhhhhcchhhhcccccccccccccccccc
Confidence 345677777777665432 223345667888888888876522 233456678888888888877532 2
Q ss_pred ccccccCCcccEEEcCCCccCchhhHh----hhC--CCCccEEEcCCCcccchhHHHHHHh----hccccEEEcCCCccc
Q 039650 283 SLSYASLTSLTNLYLYENSLCDSIQKE----IGD--MKSLSILDLSSNKLNGSILLSLANL----TNSLKVLYLSSNHIV 352 (391)
Q Consensus 283 ~~~~~~~~~L~~L~l~~~~~~~~~~~~----~~~--~~~L~~L~l~~~~i~~~~~~~~~~~----~~~L~~L~l~~~~~~ 352 (391)
...+..+++|+.|++++|.+.+..... +.. .+.|+.|++++|+|++.....+... .+.|+.|++++|++.
T Consensus 236 ~~~l~~~~~L~~L~Ls~n~i~~~g~~~l~~~l~~~~~~~L~~L~ls~N~i~~~~~~~l~~~l~~~~~~L~~L~l~~N~~~ 315 (344)
T d2ca6a1 236 AIALKSWPNLRELGLNDCLLSARGAAAVVDAFSKLENIGLQTLRLQYNEIELDAVRTLKTVIDEKMPDLLFLELNGNRFS 315 (344)
T ss_dssp HHHGGGCTTCCEEECTTCCCCHHHHHHHHHHHHTCSSCCCCEEECCSSCCBHHHHHHHHHHHHHHCTTCCEEECTTSBSC
T ss_pred cccccccccchhhhhhcCccCchhhHHHHHHhhhccCCCCCEEECCCCcCChHHHHHHHHHHHccCCCCCEEECCCCcCC
Confidence 344567788888888888886543333 322 3678899999988887665555442 247889999988876
Q ss_pred C
Q 039650 353 G 353 (391)
Q Consensus 353 ~ 353 (391)
.
T Consensus 316 ~ 316 (344)
T d2ca6a1 316 E 316 (344)
T ss_dssp T
T ss_pred C
Confidence 4
No 28
>d1w8aa_ c.10.2.7 (A:) Slit {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Probab=99.51 E-value=1.1e-14 Score=115.09 Aligned_cols=162 Identities=24% Similarity=0.217 Sum_probs=125.7
Q ss_pred ccEEEccCcccccccchhhccCCCCCEEEcCCCcccC-ccCccccCCCCccEEEccCCccccccccccccCCcccEEEcC
Q 039650 220 LTTLYFSMNALSGSIPNEITNLRSLSDLQLSENTLNG-SIPLALGNLTKLVVLYLSINKLSGSISLSYASLTSLTNLYLY 298 (391)
Q Consensus 220 L~~L~l~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~-~~~~~~~~~~~L~~l~l~~~~~~~~~~~~~~~~~~L~~L~l~ 298 (391)
.+.++.+++.++ ..|..+ .++++.|++++|.++. .....|..+++|++|++++|.+.......+..+++|++|+++
T Consensus 10 ~~~v~Cs~~~L~-~iP~~l--p~~l~~L~Ls~N~i~~~~~~~~f~~l~~L~~L~L~~N~i~~~~~~~~~~~~~L~~L~Ls 86 (192)
T d1w8aa_ 10 GTTVDCTGRGLK-EIPRDI--PLHTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLG 86 (192)
T ss_dssp TTEEECTTSCCS-SCCSCC--CTTCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECC
T ss_pred CCEEEEeCCCcC-ccCCCC--CCCCCEEEeCCCCCcccccccccCCCceEeeeeccccccccccccccccccccceeeec
Confidence 456788887776 334433 2689999999999974 456677899999999999999998888888889999999999
Q ss_pred CCccCchhhHhhhCCCCccEEEcCCCcccchhHHHHHHhhccccEEEcCCCcccCCCcccccCCccccEEEccccccccC
Q 039650 299 ENSLCDSIQKEIGDMKSLSILDLSSNKLNGSILLSLANLTNSLKVLYLSSNHIVGEIPLGHGKFSSLIQLILTNNELSGQ 378 (391)
Q Consensus 299 ~~~~~~~~~~~~~~~~~L~~L~l~~~~i~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~ 378 (391)
+|++....+..|.++++|+.|++++|+++...+.++..+. +|++|++++|++... ....+-...++...+..+.+.+.
T Consensus 87 ~N~l~~l~~~~F~~l~~L~~L~L~~N~l~~i~~~~f~~l~-~L~~l~L~~N~~~~~-~~~~~~~~~l~~~~l~~~~~~c~ 164 (192)
T d1w8aa_ 87 ENKIKEISNKMFLGLHQLKTLNLYDNQISCVMPGSFEHLN-SLTSLNLASNPFNCN-CHLAWFAEWLRKKSLNGGAARCG 164 (192)
T ss_dssp SCCCCEECSSSSTTCTTCCEEECCSSCCCEECTTSSTTCT-TCCEEECTTCCBCCS-GGGHHHHHHHHHHCCSGGGCBBC
T ss_pred cccccccCHHHHhCCCcccccccCCccccccCHHHhcCCc-ccccccccccccccc-cchHHHhhhhhhhcccCCCeEeC
Confidence 9999888888899999999999999999876666676665 899999999988733 22222223456667777777766
Q ss_pred CCcccccc
Q 039650 379 LSPELGSL 386 (391)
Q Consensus 379 ~~~~~~~~ 386 (391)
.|..+...
T Consensus 165 ~p~~l~~~ 172 (192)
T d1w8aa_ 165 APSKVRDV 172 (192)
T ss_dssp SSTTTTTS
T ss_pred CChhhcCC
Confidence 67655443
No 29
>d1a9na_ c.10.2.4 (A:) Splicesomal U2A' protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.46 E-value=7.5e-14 Score=106.42 Aligned_cols=110 Identities=21% Similarity=0.184 Sum_probs=57.0
Q ss_pred cCCCcccEEEccCcccccccchhhccCCCCCEEEcCCCcccCccCccccCCCCccEEEccCCccccccccccccCCcccE
Q 039650 215 GNLTNLTTLYFSMNALSGSIPNEITNLRSLSDLQLSENTLNGSIPLALGNLTKLVVLYLSINKLSGSISLSYASLTSLTN 294 (391)
Q Consensus 215 ~~~~~L~~L~l~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~L~~l~l~~~~~~~~~~~~~~~~~~L~~ 294 (391)
.+..++++|++++|.++.. +..+..+++|+.|++++|.+... ..+..+++|++|++++|.+.......+..+++|+.
T Consensus 15 ~n~~~lr~L~L~~n~I~~i-~~~~~~l~~L~~L~Ls~N~i~~l--~~~~~l~~L~~L~ls~N~i~~l~~~~~~~l~~L~~ 91 (162)
T d1a9na_ 15 TNAVRDRELDLRGYKIPVI-ENLGATLDQFDAIDFSDNEIRKL--DGFPLLRRLKTLLVNNNRICRIGEGLDQALPDLTE 91 (162)
T ss_dssp ECTTSCEEEECTTSCCCSC-CCGGGGTTCCSEEECCSSCCCEE--CCCCCCSSCCEEECCSSCCCEECSCHHHHCTTCCE
T ss_pred cCcCcCcEEECCCCCCCcc-CccccccccCCEEECCCCCCCcc--CCcccCcchhhhhcccccccCCCcccccccccccc
Confidence 3445566666666655533 33334455666666666655422 23455555666666666555443333444555555
Q ss_pred EEcCCCccCchhh-HhhhCCCCccEEEcCCCccc
Q 039650 295 LYLYENSLCDSIQ-KEIGDMKSLSILDLSSNKLN 327 (391)
Q Consensus 295 L~l~~~~~~~~~~-~~~~~~~~L~~L~l~~~~i~ 327 (391)
|++++|.+..... ..+..+++|+.+++++|+++
T Consensus 92 L~L~~N~i~~~~~l~~l~~l~~L~~L~l~~N~i~ 125 (162)
T d1a9na_ 92 LILTNNSLVELGDLDPLASLKSLTYLCILRNPVT 125 (162)
T ss_dssp EECCSCCCCCGGGGGGGGGCTTCCEEECCSSGGG
T ss_pred ceeccccccccccccccccccccchhhcCCCccc
Confidence 5555555543221 33445555555555555554
No 30
>d1dcea3 c.10.2.2 (A:444-567) Rab geranylgeranyltransferase alpha-subunit, C-terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=99.46 E-value=1.3e-13 Score=99.90 Aligned_cols=102 Identities=31% Similarity=0.421 Sum_probs=87.8
Q ss_pred CcccccCccCCCchhhhhcCCcccEEeecCCcCCCCCCCCCCCCCCccEEecCCcccccCChhhhhcCCCCCEEEeeCCc
Q 039650 1 LLSFSKNQLSGLIPHEIGRLSSFNGLSLYSNFLKGSIPPSLGNLTSLSYIGISNNLLSGSIPNEVESLKSLSDLRLYNNT 80 (391)
Q Consensus 1 ~l~l~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~L~~L~l~~~~ 80 (391)
+|++++|.++... .+.++++|++|++++|.+. .+|+.+..+++|++|++++|.+. .++ .+..+++|++|++++|+
T Consensus 2 ~L~Ls~n~l~~l~--~l~~l~~L~~L~ls~N~l~-~lp~~~~~l~~L~~L~l~~N~i~-~l~-~~~~l~~L~~L~l~~N~ 76 (124)
T d1dcea3 2 VLHLAHKDLTVLC--HLEQLLLVTHLDLSHNRLR-ALPPALAALRCLEVLQASDNALE-NVD-GVANLPRLQELLLCNNR 76 (124)
T ss_dssp EEECTTSCCSSCC--CGGGGTTCCEEECCSSCCC-CCCGGGGGCTTCCEEECCSSCCC-CCG-GGTTCSSCCEEECCSSC
T ss_pred EEEcCCCCCCCCc--ccccCCCCCEEECCCCccC-cchhhhhhhhccccccccccccc-ccC-ccccccccCeEECCCCc
Confidence 5899999999664 3889999999999999997 56778999999999999999987 455 48899999999999999
Q ss_pred cCCCC-cccccCCCCCceEEeccccccc
Q 039650 81 LKGSI-PSSLGNLTNLVNLHLHINALSG 107 (391)
Q Consensus 81 ~~~~~-~~~~~~l~~L~~L~l~~~~~~~ 107 (391)
+.+.. ...+..+++|+++++++|.+..
T Consensus 77 i~~~~~~~~l~~~~~L~~L~l~~N~i~~ 104 (124)
T d1dcea3 77 LQQSAAIQPLVSCPRLVLLNLQGNSLCQ 104 (124)
T ss_dssp CCSSSTTGGGGGCTTCCEEECTTSGGGG
T ss_pred cCCCCCchhhcCCCCCCEEECCCCcCCc
Confidence 98543 3568899999999999998864
No 31
>d1a9na_ c.10.2.4 (A:) Splicesomal U2A' protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.44 E-value=3.4e-13 Score=102.71 Aligned_cols=109 Identities=22% Similarity=0.173 Sum_probs=50.0
Q ss_pred cCCCCCEEEcCCCcccCccCccccCCCCccEEEccCCccccccccccccCCcccEEEcCCCccCchhhHhhhCCCCccEE
Q 039650 240 NLRSLSDLQLSENTLNGSIPLALGNLTKLVVLYLSINKLSGSISLSYASLTSLTNLYLYENSLCDSIQKEIGDMKSLSIL 319 (391)
Q Consensus 240 ~~~~L~~L~l~~~~~~~~~~~~~~~~~~L~~l~l~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~L~~L 319 (391)
.+.++++|++++|.+.. .+..+..+++|++|++++|.+... ..+..+++|+.|++++|.+....+..+..+++|+.|
T Consensus 16 n~~~lr~L~L~~n~I~~-i~~~~~~l~~L~~L~Ls~N~i~~l--~~~~~l~~L~~L~ls~N~i~~l~~~~~~~l~~L~~L 92 (162)
T d1a9na_ 16 NAVRDRELDLRGYKIPV-IENLGATLDQFDAIDFSDNEIRKL--DGFPLLRRLKTLLVNNNRICRIGEGLDQALPDLTEL 92 (162)
T ss_dssp CTTSCEEEECTTSCCCS-CCCGGGGTTCCSEEECCSSCCCEE--CCCCCCSSCCEEECCSSCCCEECSCHHHHCTTCCEE
T ss_pred CcCcCcEEECCCCCCCc-cCccccccccCCEEECCCCCCCcc--CCcccCcchhhhhcccccccCCCccccccccccccc
Confidence 33445555555555542 233334445555555555555432 123444555555555555544333334445555555
Q ss_pred EcCCCcccchhH-HHHHHhhccccEEEcCCCccc
Q 039650 320 DLSSNKLNGSIL-LSLANLTNSLKVLYLSSNHIV 352 (391)
Q Consensus 320 ~l~~~~i~~~~~-~~~~~~~~~L~~L~l~~~~~~ 352 (391)
++++|++.+... ..+..++ +|++|++++|+++
T Consensus 93 ~L~~N~i~~~~~l~~l~~l~-~L~~L~l~~N~i~ 125 (162)
T d1a9na_ 93 ILTNNSLVELGDLDPLASLK-SLTYLCILRNPVT 125 (162)
T ss_dssp ECCSCCCCCGGGGGGGGGCT-TCCEEECCSSGGG
T ss_pred eecccccccccccccccccc-ccchhhcCCCccc
Confidence 555555543211 2222222 4555555555544
No 32
>d1dcea3 c.10.2.2 (A:444-567) Rab geranylgeranyltransferase alpha-subunit, C-terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=99.39 E-value=2e-12 Score=93.52 Aligned_cols=86 Identities=34% Similarity=0.373 Sum_probs=35.3
Q ss_pred ccCCCCCEEEcCCCcccCccCccccCCCCccEEEccCCccccccccccccCCcccEEEcCCCccCchh-hHhhhCCCCcc
Q 039650 239 TNLRSLSDLQLSENTLNGSIPLALGNLTKLVVLYLSINKLSGSISLSYASLTSLTNLYLYENSLCDSI-QKEIGDMKSLS 317 (391)
Q Consensus 239 ~~~~~L~~L~l~~~~~~~~~~~~~~~~~~L~~l~l~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~-~~~~~~~~~L~ 317 (391)
..+++|++|++++|.+. ..+..+..+++|+++++++|.+++.. .+..+++|+.+++++|.+.... ...+..+++|+
T Consensus 17 ~~l~~L~~L~ls~N~l~-~lp~~~~~l~~L~~L~l~~N~i~~l~--~~~~l~~L~~L~l~~N~i~~~~~~~~l~~~~~L~ 93 (124)
T d1dcea3 17 EQLLLVTHLDLSHNRLR-ALPPALAALRCLEVLQASDNALENVD--GVANLPRLQELLLCNNRLQQSAAIQPLVSCPRLV 93 (124)
T ss_dssp GGGTTCCEEECCSSCCC-CCCGGGGGCTTCCEEECCSSCCCCCG--GGTTCSSCCEEECCSSCCCSSSTTGGGGGCTTCC
T ss_pred ccCCCCCEEECCCCccC-cchhhhhhhhcccccccccccccccC--ccccccccCeEECCCCccCCCCCchhhcCCCCCC
Confidence 34444444444444443 22223344444444444444443221 2334444444444444443221 12334444444
Q ss_pred EEEcCCCccc
Q 039650 318 ILDLSSNKLN 327 (391)
Q Consensus 318 ~L~l~~~~i~ 327 (391)
.+++++|+++
T Consensus 94 ~L~l~~N~i~ 103 (124)
T d1dcea3 94 LLNLQGNSLC 103 (124)
T ss_dssp EEECTTSGGG
T ss_pred EEECCCCcCC
Confidence 4444444443
No 33
>d1m9la_ c.10.3.1 (A:) Outer arm dynein light chain 1 {Green algae (Chlamydomonas reinhardtii) [TaxId: 3055]}
Probab=99.16 E-value=1.6e-12 Score=102.47 Aligned_cols=111 Identities=24% Similarity=0.300 Sum_probs=52.6
Q ss_pred hhhccCCCCCEEEcCCCcccCccCccccCCCCccEEEccCCccccccccccccCCcccEEEcCCCccCchhhHhhhCCCC
Q 039650 236 NEITNLRSLSDLQLSENTLNGSIPLALGNLTKLVVLYLSINKLSGSISLSYASLTSLTNLYLYENSLCDSIQKEIGDMKS 315 (391)
Q Consensus 236 ~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~L~~l~l~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~ 315 (391)
..+..+++|+.|++++|.+... + .+..+++|++|++++|.+... +.....+++|+.|++++|.+... ..+..+++
T Consensus 42 ~sl~~L~~L~~L~Ls~n~I~~i-~-~l~~l~~L~~L~Ls~N~i~~i-~~~~~~~~~L~~L~l~~N~i~~l--~~~~~l~~ 116 (198)
T d1m9la_ 42 ATLSTLKACKHLALSTNNIEKI-S-SLSGMENLRILSLGRNLIKKI-ENLDAVADTLEELWISYNQIASL--SGIEKLVN 116 (198)
T ss_dssp HHHHHTTTCCEEECSEEEESCC-C-CHHHHTTCCEEECCEEEECSC-SSHHHHHHHCCEEECSEEECCCH--HHHHHHHH
T ss_pred hHHhcccccceeECcccCCCCc-c-cccCCccccChhhcccccccc-ccccccccccccccccccccccc--cccccccc
Confidence 3344455555555555555422 1 244555555555555555422 11222234555555555555432 22444555
Q ss_pred ccEEEcCCCcccchhH-HHHHHhhccccEEEcCCCccc
Q 039650 316 LSILDLSSNKLNGSIL-LSLANLTNSLKVLYLSSNHIV 352 (391)
Q Consensus 316 L~~L~l~~~~i~~~~~-~~~~~~~~~L~~L~l~~~~~~ 352 (391)
|+.|++++|++++... ..+..++ +|+.|++++|++.
T Consensus 117 L~~L~L~~N~i~~~~~~~~l~~l~-~L~~L~L~~N~l~ 153 (198)
T d1m9la_ 117 LRVLYMSNNKITNWGEIDKLAALD-KLEDLLLAGNPLY 153 (198)
T ss_dssp SSEEEESEEECCCHHHHHHHTTTT-TCSEEEECSSHHH
T ss_pred ccccccccchhccccccccccCCC-ccceeecCCCccc
Confidence 5555555555543221 2233332 5555555555544
No 34
>d1m9la_ c.10.3.1 (A:) Outer arm dynein light chain 1 {Green algae (Chlamydomonas reinhardtii) [TaxId: 3055]}
Probab=99.13 E-value=3e-12 Score=100.93 Aligned_cols=112 Identities=21% Similarity=0.282 Sum_probs=74.3
Q ss_pred ccccCCCcccEEEccCcccccccchhhccCCCCCEEEcCCCcccCccCccccCCCCccEEEccCCccccccccccccCCc
Q 039650 212 LSLGNLTNLTTLYFSMNALSGSIPNEITNLRSLSDLQLSENTLNGSIPLALGNLTKLVVLYLSINKLSGSISLSYASLTS 291 (391)
Q Consensus 212 ~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~L~~l~l~~~~~~~~~~~~~~~~~~ 291 (391)
..+..+++|+.|++++|.+... ..+..+++|+.|++++|.+. ..+.....+++|++|++++|.++.. ..+..+++
T Consensus 42 ~sl~~L~~L~~L~Ls~n~I~~i--~~l~~l~~L~~L~Ls~N~i~-~i~~~~~~~~~L~~L~l~~N~i~~l--~~~~~l~~ 116 (198)
T d1m9la_ 42 ATLSTLKACKHLALSTNNIEKI--SSLSGMENLRILSLGRNLIK-KIENLDAVADTLEELWISYNQIASL--SGIEKLVN 116 (198)
T ss_dssp HHHHHTTTCCEEECSEEEESCC--CCHHHHTTCCEEECCEEEEC-SCSSHHHHHHHCCEEECSEEECCCH--HHHHHHHH
T ss_pred hHHhcccccceeECcccCCCCc--ccccCCccccChhhcccccc-ccccccccccccccccccccccccc--cccccccc
Confidence 4455666777777777766533 23666777777777777765 3333334456777888887777643 23556778
Q ss_pred ccEEEcCCCccCchhh-HhhhCCCCccEEEcCCCcccc
Q 039650 292 LTNLYLYENSLCDSIQ-KEIGDMKSLSILDLSSNKLNG 328 (391)
Q Consensus 292 L~~L~l~~~~~~~~~~-~~~~~~~~L~~L~l~~~~i~~ 328 (391)
|+.|++++|.+..... ..+..+++|+.|++++|++..
T Consensus 117 L~~L~L~~N~i~~~~~~~~l~~l~~L~~L~L~~N~l~~ 154 (198)
T d1m9la_ 117 LRVLYMSNNKITNWGEIDKLAALDKLEDLLLAGNPLYN 154 (198)
T ss_dssp SSEEEESEEECCCHHHHHHHTTTTTCSEEEECSSHHHH
T ss_pred ccccccccchhccccccccccCCCccceeecCCCcccc
Confidence 8888888887765432 467778888888888887653
No 35
>d2ifga3 c.10.2.7 (A:36-191) High affinity nerve growth factor receptor, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.10 E-value=4.8e-10 Score=84.30 Aligned_cols=89 Identities=24% Similarity=0.169 Sum_probs=46.2
Q ss_pred hccCCCCCEEEcCCC-cccCccCccccCCCCccEEEccCCccccccccccccCCcccEEEcCCCccCchhhHhhhCCCCc
Q 039650 238 ITNLRSLSDLQLSEN-TLNGSIPLALGNLTKLVVLYLSINKLSGSISLSYASLTSLTNLYLYENSLCDSIQKEIGDMKSL 316 (391)
Q Consensus 238 ~~~~~~L~~L~l~~~-~~~~~~~~~~~~~~~L~~l~l~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~L 316 (391)
+...++|++|.++++ .+....+..|..+++|+.|++++|.+....+..|..+++|++|++++|.+.......+.. .+|
T Consensus 27 l~~l~~l~~L~l~~n~~l~~i~~~~f~~l~~L~~L~Ls~N~l~~i~~~~f~~l~~L~~L~Ls~N~l~~l~~~~~~~-~~l 105 (156)
T d2ifga3 27 LPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDAFHFTPRLSRLNLSFNALESLSWKTVQG-LSL 105 (156)
T ss_dssp SCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECTTGGGSCSCCCEEECCSSCCSCCCSTTTCS-CCC
T ss_pred ccCccccCeeecCCCccccccCchhhccccccCcceeeccccCCcccccccccccccceeccCCCCcccChhhhcc-ccc
Confidence 344445555555433 244333444555555555555555555444555555555666666666555444444433 246
Q ss_pred cEEEcCCCccc
Q 039650 317 SILDLSSNKLN 327 (391)
Q Consensus 317 ~~L~l~~~~i~ 327 (391)
+.|++++|.+.
T Consensus 106 ~~L~L~~Np~~ 116 (156)
T d2ifga3 106 QELVLSGNPLH 116 (156)
T ss_dssp CEEECCSSCCC
T ss_pred cccccCCCccc
Confidence 66666666553
No 36
>d2ifga3 c.10.2.7 (A:36-191) High affinity nerve growth factor receptor, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.07 E-value=9.1e-11 Score=88.38 Aligned_cols=108 Identities=24% Similarity=0.167 Sum_probs=84.5
Q ss_pred CCCCEEEcCCCcccCccCccccCCCCccEEEccCCc-cccccccccccCCcccEEEcCCCccCchhhHhhhCCCCccEEE
Q 039650 242 RSLSDLQLSENTLNGSIPLALGNLTKLVVLYLSINK-LSGSISLSYASLTSLTNLYLYENSLCDSIQKEIGDMKSLSILD 320 (391)
Q Consensus 242 ~~L~~L~l~~~~~~~~~~~~~~~~~~L~~l~l~~~~-~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~L~~L~ 320 (391)
...+.++.++.... ..+..+..+++|++|++++++ ++......|.++++|+.|++++|.+....+.+|..+++|+.|+
T Consensus 8 ~~~~~l~c~~~~~~-~~p~~l~~l~~l~~L~l~~n~~l~~i~~~~f~~l~~L~~L~Ls~N~l~~i~~~~f~~l~~L~~L~ 86 (156)
T d2ifga3 8 HGSSGLRCTRDGAL-DSLHHLPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDAFHFTPRLSRLN 86 (156)
T ss_dssp SSSSCEECCSSCCC-TTTTTSCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECTTGGGSCSCCCEEE
T ss_pred CCCCeEEecCCCCc-cCcccccCccccCeeecCCCccccccCchhhccccccCcceeeccccCCccccccccccccccee
Confidence 34556777776665 345567788899999998764 7766677888899999999999999887788899999999999
Q ss_pred cCCCcccchhHHHHHHhhccccEEEcCCCccc
Q 039650 321 LSSNKLNGSILLSLANLTNSLKVLYLSSNHIV 352 (391)
Q Consensus 321 l~~~~i~~~~~~~~~~~~~~L~~L~l~~~~~~ 352 (391)
+++|+++ .++....... +|+.|++++|++.
T Consensus 87 Ls~N~l~-~l~~~~~~~~-~l~~L~L~~Np~~ 116 (156)
T d2ifga3 87 LSFNALE-SLSWKTVQGL-SLQELVLSGNPLH 116 (156)
T ss_dssp CCSSCCS-CCCSTTTCSC-CCCEEECCSSCCC
T ss_pred ccCCCCc-ccChhhhccc-cccccccCCCccc
Confidence 9999998 4444444444 6999999998875
No 37
>d1koha1 c.10.2.3 (A:201-362) mRNA export factor tap {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.27 E-value=4.5e-08 Score=73.79 Aligned_cols=83 Identities=24% Similarity=0.303 Sum_probs=59.0
Q ss_pred cccCCcccEEEcCCCccCch--hhHhhhCCCCccEEEcCCCcccchhHHHHHHhhccccEEEcCCCcccCCCc-------
Q 039650 286 YASLTSLTNLYLYENSLCDS--IQKEIGDMKSLSILDLSSNKLNGSILLSLANLTNSLKVLYLSSNHIVGEIP------- 356 (391)
Q Consensus 286 ~~~~~~L~~L~l~~~~~~~~--~~~~~~~~~~L~~L~l~~~~i~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~------- 356 (391)
...++.|+.|++++|.++.. ....+..+++|+.|++++|.|++.......... .|+.|++++|++.....
T Consensus 61 ~~~~~~L~~L~Ls~N~i~~l~~~~~~~~~l~~L~~L~Ls~N~i~~l~~l~~l~~~-~L~~L~L~~Npl~~~~~~~~~y~~ 139 (162)
T d1koha1 61 EENIPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSERELDKIKGL-KLEELWLDGNSLSDTFRDQSTYIS 139 (162)
T ss_dssp HHHCTTCCCCCCCSSCCCCCSGGGTHHHHSTTCCCCCCTTSCCCCGGGHHHHTTC-CCSSCCCTTSTTSSSSSSHHHHHH
T ss_pred HHhCCCCCEeeCCCccccCCchhHHHHhhCCcccccccccCccccchhhhhhhcc-ccceeecCCCCcCcCcccchhHHH
Confidence 34678888888888888653 234567788899999999988865444444444 68889999988875433
Q ss_pred ccccCCccccEEE
Q 039650 357 LGHGKFSSLIQLI 369 (391)
Q Consensus 357 ~~~~~~~~L~~L~ 369 (391)
..+..+|+|+.|+
T Consensus 140 ~i~~~~P~L~~LD 152 (162)
T d1koha1 140 AIRERFPKLLRLD 152 (162)
T ss_dssp HHHTTSTTCCEET
T ss_pred HHHHHCCCCCEEC
Confidence 2256788888775
No 38
>d1pgva_ c.10.1.1 (A:) Tropomodulin C-terminal domain {nematode (Caenorhabditis elegans) [TaxId: 6239]}
Probab=98.25 E-value=9.1e-07 Score=66.78 Aligned_cols=85 Identities=19% Similarity=0.198 Sum_probs=35.9
Q ss_pred CCcccEEEcCCCccCch----hhHhhhCCCCccEEEcCCCcccchhHHHHHHhh---ccccEEEcCCCcccCC-------
Q 039650 289 LTSLTNLYLYENSLCDS----IQKEIGDMKSLSILDLSSNKLNGSILLSLANLT---NSLKVLYLSSNHIVGE------- 354 (391)
Q Consensus 289 ~~~L~~L~l~~~~~~~~----~~~~~~~~~~L~~L~l~~~~i~~~~~~~~~~~~---~~L~~L~l~~~~~~~~------- 354 (391)
.++|+.|++++|.+.+. ....+...+.|+.|++++|.+++.+...+.... ++|++|++++|.+...
T Consensus 43 n~~L~~L~Ls~n~l~~~~~~~la~~L~~n~~L~~L~L~~n~i~~~g~~~l~~aL~~n~sL~~L~l~~n~~~~~g~~~~~~ 122 (167)
T d1pgva_ 43 SKHIEKFSLANTAISDSEARGLIELIETSPSLRVLNVESNFLTPELLARLLRSTLVTQSIVEFKADNQRQSVLGNQVEMD 122 (167)
T ss_dssp CSCCCEEECTTSCCBHHHHTTHHHHHHHCSSCCEEECCSSBCCHHHHHHHHHHTTTTCCCSEEECCCCSSCCCCHHHHHH
T ss_pred CCccceeeccccccchhHHHHHhhhhhhcccccceeeehhhcchHHHHHHHHHHHhCCcCCEEECCCCcCCCccHHHHHH
Confidence 34444444444444321 112233344555555555555544433333322 2355555554433211
Q ss_pred CcccccCCccccEEEcccc
Q 039650 355 IPLGHGKFSSLIQLILTNN 373 (391)
Q Consensus 355 ~~~~~~~~~~L~~L~l~~~ 373 (391)
+...+...++|++|+++.+
T Consensus 123 l~~~L~~n~sL~~l~l~~~ 141 (167)
T d1pgva_ 123 MMMAIEENESLLRVGISFA 141 (167)
T ss_dssp HHHHHHHCSSCCEEECCCC
T ss_pred HHHHHHhCCCccEeeCcCC
Confidence 2233334455555555443
No 39
>d1koha1 c.10.2.3 (A:201-362) mRNA export factor tap {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.10 E-value=2.8e-07 Score=69.33 Aligned_cols=65 Identities=20% Similarity=0.190 Sum_probs=30.7
Q ss_pred hcCCcccEEeecCCcCCCC--CCCCCCCCCCccEEecCCcccccCChhhhhcCCCCCEEEeeCCccC
Q 039650 18 GRLSSFNGLSLYSNFLKGS--IPPSLGNLTSLSYIGISNNLLSGSIPNEVESLKSLSDLRLYNNTLK 82 (391)
Q Consensus 18 ~~~~~L~~L~l~~~~~~~~--~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~ 82 (391)
.++++|++|++++|.++.. ++..+..+++|++|++++|.+.....-.......|+.+++.+|.+.
T Consensus 62 ~~~~~L~~L~Ls~N~i~~l~~~~~~~~~l~~L~~L~Ls~N~i~~l~~l~~l~~~~L~~L~L~~Npl~ 128 (162)
T d1koha1 62 ENIPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSERELDKIKGLKLEELWLDGNSLS 128 (162)
T ss_dssp HHCTTCCCCCCCSSCCCCCSGGGTHHHHSTTCCCCCCTTSCCCCGGGHHHHTTCCCSSCCCTTSTTS
T ss_pred HhCCCCCEeeCCCccccCCchhHHHHhhCCcccccccccCccccchhhhhhhccccceeecCCCCcC
Confidence 3455555566655555432 1223444555555555555554211111223334555555555544
No 40
>d1pgva_ c.10.1.1 (A:) Tropomodulin C-terminal domain {nematode (Caenorhabditis elegans) [TaxId: 6239]}
Probab=97.92 E-value=6.2e-06 Score=62.02 Aligned_cols=90 Identities=19% Similarity=0.227 Sum_probs=69.5
Q ss_pred ccCCcccEEEcCCC-ccCch----hhHhhhCCCCccEEEcCCCcccchhHHHHHHh---hccccEEEcCCCcccCC----
Q 039650 287 ASLTSLTNLYLYEN-SLCDS----IQKEIGDMKSLSILDLSSNKLNGSILLSLANL---TNSLKVLYLSSNHIVGE---- 354 (391)
Q Consensus 287 ~~~~~L~~L~l~~~-~~~~~----~~~~~~~~~~L~~L~l~~~~i~~~~~~~~~~~---~~~L~~L~l~~~~~~~~---- 354 (391)
...++|+.|+++++ .+... ....+...++|+.|++++|.+++.....+... .++|++|++++|.+++.
T Consensus 12 ~n~~~L~~L~L~~~~~i~~~~~~~l~~~L~~n~~L~~L~Ls~n~l~~~~~~~la~~L~~n~~L~~L~L~~n~i~~~g~~~ 91 (167)
T d1pgva_ 12 EDDTDLKEVNINNMKRVSKERIRSLIEAACNSKHIEKFSLANTAISDSEARGLIELIETSPSLRVLNVESNFLTPELLAR 91 (167)
T ss_dssp TTCSSCCEEECTTCCSSCHHHHHHHHHHHTTCSCCCEEECTTSCCBHHHHTTHHHHHHHCSSCCEEECCSSBCCHHHHHH
T ss_pred hCCCCCcEEEeCCCCCCCHHHHHHHHHHHhhCCccceeeccccccchhHHHHHhhhhhhcccccceeeehhhcchHHHHH
Confidence 35688999999875 46442 33456678999999999999987666655543 34899999999999865
Q ss_pred CcccccCCccccEEEccccccc
Q 039650 355 IPLGHGKFSSLIQLILTNNELS 376 (391)
Q Consensus 355 ~~~~~~~~~~L~~L~l~~~~~~ 376 (391)
+...+...++|++|++++|...
T Consensus 92 l~~aL~~n~sL~~L~l~~n~~~ 113 (167)
T d1pgva_ 92 LLRSTLVTQSIVEFKADNQRQS 113 (167)
T ss_dssp HHHHTTTTCCCSEEECCCCSSC
T ss_pred HHHHHHhCCcCCEEECCCCcCC
Confidence 3456778899999999998654
No 41
>d1io0a_ c.10.1.1 (A:) Tropomodulin C-terminal domain {Chicken (Gallus gallus) [TaxId: 9031]}
Probab=97.82 E-value=9.7e-06 Score=60.92 Aligned_cols=86 Identities=20% Similarity=0.191 Sum_probs=37.8
Q ss_pred cCCcccEEEcCCCccCchh----hHhhhCCCCccEEEcCCCcccchhHHHHHHhh---ccccEEEcC--CCcccCC----
Q 039650 288 SLTSLTNLYLYENSLCDSI----QKEIGDMKSLSILDLSSNKLNGSILLSLANLT---NSLKVLYLS--SNHIVGE---- 354 (391)
Q Consensus 288 ~~~~L~~L~l~~~~~~~~~----~~~~~~~~~L~~L~l~~~~i~~~~~~~~~~~~---~~L~~L~l~--~~~~~~~---- 354 (391)
..++|+.|++++|.+.... ...+...++++.+++++|.+++.+...+.... ++|+.++++ +|.+.+.
T Consensus 44 ~n~~L~~L~Ls~n~l~~~~~~~L~~~l~~~~~l~~l~l~~~~~~~~g~~~l~~~l~~~~~L~~l~L~l~~n~i~~~~~~~ 123 (166)
T d1io0a_ 44 TNTYVKKFSIVGTRSNDPVAFALAEMLKVNNTLKSLNVESNFISGSGILALVEALQSNTSLIELRIDNQSQPLGNNVEME 123 (166)
T ss_dssp TCCSCCEEECTTSCCCHHHHHHHHHHHHHCSSCCEEECCSSCCCHHHHHHHHHGGGGCSSCCEEECCCCSSCCCHHHHHH
T ss_pred cCCccCeeeccCCcccHHHHHHHHHHHhhcccchhhhhccccccchhHHHHHHHHHhCccccEEeeccCCCcCcHHHHHH
Confidence 3445555555555443321 12233445555555555555544433333222 234443333 3334332
Q ss_pred CcccccCCccccEEEcccc
Q 039650 355 IPLGHGKFSSLIQLILTNN 373 (391)
Q Consensus 355 ~~~~~~~~~~L~~L~l~~~ 373 (391)
+...+..++.|++|++..+
T Consensus 124 La~~L~~n~~L~~L~l~~~ 142 (166)
T d1io0a_ 124 IANMLEKNTTLLKFGYHFT 142 (166)
T ss_dssp HHHHHHHCSSCCEEECCCS
T ss_pred HHHHHHhCCCcCEEeCcCC
Confidence 2333345555666655544
No 42
>d1io0a_ c.10.1.1 (A:) Tropomodulin C-terminal domain {Chicken (Gallus gallus) [TaxId: 9031]}
Probab=97.54 E-value=4.4e-05 Score=57.19 Aligned_cols=87 Identities=15% Similarity=0.131 Sum_probs=42.4
Q ss_pred cCCCCccEEEccCCcccccc----ccccccCCcccEEEcCCCccCch----hhHhhhCCCCccEEEcC--CCcccchhHH
Q 039650 263 GNLTKLVVLYLSINKLSGSI----SLSYASLTSLTNLYLYENSLCDS----IQKEIGDMKSLSILDLS--SNKLNGSILL 332 (391)
Q Consensus 263 ~~~~~L~~l~l~~~~~~~~~----~~~~~~~~~L~~L~l~~~~~~~~----~~~~~~~~~~L~~L~l~--~~~i~~~~~~ 332 (391)
...+.|++|++++|.++... ...+...++++.+++++|.+... ....+...++|+.+++. +|.+.+.+..
T Consensus 43 ~~n~~L~~L~Ls~n~l~~~~~~~L~~~l~~~~~l~~l~l~~~~~~~~g~~~l~~~l~~~~~L~~l~L~l~~n~i~~~~~~ 122 (166)
T d1io0a_ 43 KTNTYVKKFSIVGTRSNDPVAFALAEMLKVNNTLKSLNVESNFISGSGILALVEALQSNTSLIELRIDNQSQPLGNNVEM 122 (166)
T ss_dssp TTCCSCCEEECTTSCCCHHHHHHHHHHHHHCSSCCEEECCSSCCCHHHHHHHHHGGGGCSSCCEEECCCCSSCCCHHHHH
T ss_pred hcCCccCeeeccCCcccHHHHHHHHHHHhhcccchhhhhccccccchhHHHHHHHHHhCccccEEeeccCCCcCcHHHHH
Confidence 34555666666665554221 12223445666666666665432 22334455666654443 4455554433
Q ss_pred HHHH---hhccccEEEcCCC
Q 039650 333 SLAN---LTNSLKVLYLSSN 349 (391)
Q Consensus 333 ~~~~---~~~~L~~L~l~~~ 349 (391)
.+.. ..++|+.|+++.+
T Consensus 123 ~La~~L~~n~~L~~L~l~~~ 142 (166)
T d1io0a_ 123 EIANMLEKNTTLLKFGYHFT 142 (166)
T ss_dssp HHHHHHHHCSSCCEEECCCS
T ss_pred HHHHHHHhCCCcCEEeCcCC
Confidence 3332 2235666666554
Done!