Query 039651
Match_columns 353
No_of_seqs 95 out of 112
Neff 5.0
Searched_HMMs 46136
Date Fri Mar 29 11:48:21 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/039651.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/039651hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN03180 reversibly glycosylat 100.0 1E-125 3E-130 915.7 27.1 343 1-348 3-346 (346)
2 PF03214 RGP: Reversibly glyco 100.0 3E-119 7E-124 869.9 25.3 343 1-348 1-347 (348)
3 PF03385 DUF288: Protein of un 99.9 8.4E-27 1.8E-31 228.7 10.1 105 236-345 1-108 (390)
4 cd02520 Glucosylceramide_synth 92.3 0.14 3.1E-06 45.3 3.5 23 86-108 80-102 (196)
5 PF00535 Glycos_transf_2: Glyc 92.2 0.055 1.2E-06 44.4 0.8 84 12-109 1-95 (169)
6 PF13641 Glyco_tranf_2_3: Glyc 92.1 0.11 2.3E-06 46.6 2.5 65 201-279 156-221 (228)
7 cd06437 CESA_CaSu_A2 Cellulose 91.6 0.44 9.5E-06 43.1 6.0 25 84-108 79-103 (232)
8 PLN02726 dolichyl-phosphate be 90.5 0.22 4.7E-06 45.9 2.9 94 1-108 1-109 (243)
9 TIGR03472 HpnI hopanoid biosyn 90.4 0.42 9.1E-06 47.5 5.1 65 203-278 199-263 (373)
10 cd06421 CESA_CelA_like CESA_Ce 90.4 0.17 3.7E-06 45.1 2.1 85 10-108 2-100 (234)
11 cd06434 GT2_HAS Hyaluronan syn 90.0 0.36 7.7E-06 43.2 3.8 25 85-109 70-94 (235)
12 cd06427 CESA_like_2 CESA_like_ 89.6 0.19 4.1E-06 46.1 1.7 28 82-109 74-101 (241)
13 cd06433 GT_2_WfgS_like WfgS an 88.3 0.44 9.6E-06 40.7 3.0 27 82-108 65-91 (202)
14 cd04195 GT2_AmsE_like GT2_AmsE 86.7 0.32 6.9E-06 42.5 1.3 27 82-108 70-96 (201)
15 cd06442 DPM1_like DPM1_like re 86.1 0.57 1.2E-05 41.5 2.6 27 82-108 68-94 (224)
16 PRK10018 putative glycosyl tra 84.0 1.4 3E-05 42.7 4.3 86 10-108 6-101 (279)
17 cd06423 CESA_like CESA_like is 83.8 1.4 3.1E-05 35.8 3.8 27 82-108 68-94 (180)
18 cd04196 GT_2_like_d Subfamily 83.0 1.6 3.6E-05 38.0 4.1 24 85-108 72-95 (214)
19 cd02525 Succinoglycan_BP_ExoA 82.0 1.6 3.4E-05 39.0 3.7 26 83-108 72-97 (249)
20 cd04192 GT_2_like_e Subfamily 81.9 0.95 2.1E-05 39.9 2.2 24 85-108 75-98 (229)
21 cd06420 GT2_Chondriotin_Pol_N 80.9 1.6 3.4E-05 37.4 3.1 26 83-108 70-95 (182)
22 PRK10073 putative glycosyl tra 80.5 2.3 5.1E-05 41.8 4.6 84 10-108 7-101 (328)
23 cd02511 Beta4Glucosyltransfera 79.1 1.8 3.8E-05 39.6 3.0 82 11-108 2-87 (229)
24 PRK10063 putative glycosyl tra 78.6 1.1 2.4E-05 42.2 1.5 28 81-108 71-98 (248)
25 cd02510 pp-GalNAc-T pp-GalNAc- 78.5 0.54 1.2E-05 44.7 -0.6 36 83-118 74-109 (299)
26 cd04184 GT2_RfbC_Mx_like Myxoc 76.8 1.1 2.3E-05 39.1 0.8 25 84-108 75-99 (202)
27 PRK14583 hmsR N-glycosyltransf 76.4 2.9 6.4E-05 42.6 4.0 83 11-108 77-171 (444)
28 cd04188 DPG_synthase DPG_synth 76.2 2.1 4.5E-05 38.1 2.5 82 13-108 1-98 (211)
29 COG0463 WcaA Glycosyltransfera 76.1 4 8.6E-05 32.6 3.9 84 9-108 3-98 (291)
30 cd04186 GT_2_like_c Subfamily 76.0 1.2 2.7E-05 36.8 1.0 26 83-108 65-90 (166)
31 TIGR03469 HonB hopene-associat 74.8 2.6 5.7E-05 42.1 3.1 25 85-109 121-150 (384)
32 cd02522 GT_2_like_a GT_2_like_ 74.7 3.2 6.8E-05 36.6 3.3 26 83-108 63-88 (221)
33 PRK11204 N-glycosyltransferase 73.6 3.9 8.6E-05 40.8 4.0 84 10-108 55-150 (420)
34 cd04179 DPM_DPG-synthase_like 73.4 2.3 4.9E-05 36.4 2.0 27 82-108 69-95 (185)
35 cd06435 CESA_NdvC_like NdvC_li 73.0 2.5 5.5E-05 37.9 2.3 26 83-108 73-100 (236)
36 cd06439 CESA_like_1 CESA_like_ 72.2 4.5 9.8E-05 36.7 3.8 25 84-108 101-125 (251)
37 cd06913 beta3GnTL1_like Beta 1 69.8 2.9 6.4E-05 37.3 1.9 26 83-108 75-100 (219)
38 PF10111 Glyco_tranf_2_2: Glyc 67.2 2.2 4.7E-05 40.8 0.6 38 78-122 74-111 (281)
39 cd04185 GT_2_like_b Subfamily 66.6 8.2 0.00018 33.7 4.1 16 93-108 80-95 (202)
40 PF04583 Baculo_p74: Baculovir 65.9 2.7 5.8E-05 40.8 0.9 21 135-155 122-142 (249)
41 cd02526 GT2_RfbF_like RfbF is 63.7 3.4 7.3E-05 37.0 1.1 25 84-108 64-91 (237)
42 cd04187 DPM1_like_bac Bacteria 61.9 7.9 0.00017 33.3 3.0 24 85-108 73-96 (181)
43 cd06438 EpsO_like EpsO protein 61.4 1.7 3.7E-05 37.9 -1.3 24 85-108 69-97 (183)
44 PRK10714 undecaprenyl phosphat 61.3 13 0.00029 36.5 4.8 88 7-108 4-106 (325)
45 cd04190 Chitin_synth_C C-termi 60.3 6.6 0.00014 36.4 2.4 24 85-108 66-89 (244)
46 PTZ00260 dolichyl-phosphate be 60.3 8.5 0.00018 38.1 3.3 25 84-108 154-178 (333)
47 TIGR03111 glyc2_xrt_Gpos1 puta 57.2 13 0.00028 38.1 4.1 24 85-108 124-147 (439)
48 PRK11498 bcsA cellulose syntha 57.2 5.6 0.00012 44.8 1.6 82 10-108 261-355 (852)
49 TIGR03030 CelA cellulose synth 56.4 8.9 0.00019 42.0 2.9 97 10-108 132-244 (713)
50 PF01762 Galactosyl_T: Galacto 55.2 7.5 0.00016 35.0 1.8 47 196-249 139-187 (195)
51 PRK13915 putative glucosyl-3-p 48.4 20 0.00043 35.1 3.7 23 85-107 108-130 (306)
52 cd04191 Glucan_BSP_ModH Glucan 37.2 13 0.00029 35.4 0.5 67 200-273 167-238 (254)
53 PRK05454 glucosyltransferase M 31.3 23 0.0005 39.0 1.2 54 201-261 293-349 (691)
54 PF09039 HTH_Tnp_Mu_2: Mu DNA 30.4 50 0.0011 28.1 2.8 38 284-321 30-67 (108)
55 cd02514 GT13_GLCNAC-TI GT13_GL 29.9 55 0.0012 33.0 3.5 16 93-108 98-113 (334)
56 cd00761 Glyco_tranf_GTA_type G 29.4 55 0.0012 25.6 2.9 22 87-108 72-93 (156)
57 PF13632 Glyco_trans_2_3: Glyc 26.4 1.2E+02 0.0025 26.4 4.6 67 199-278 67-134 (193)
58 cd06436 GlcNAc-1-P_transferase 26.1 64 0.0014 28.4 2.9 15 94-108 91-105 (191)
59 cd02515 Glyco_transf_6 Glycosy 24.9 1.3E+02 0.0029 29.7 5.1 91 11-108 36-139 (271)
60 COG1093 SUI2 Translation initi 24.0 1.4E+02 0.0031 29.4 5.1 68 273-348 94-171 (269)
61 PF04666 Glyco_transf_54: N-Ac 22.4 46 0.00099 33.1 1.4 32 78-109 151-186 (297)
62 COG1110 Reverse gyrase [DNA re 21.7 65 0.0014 37.5 2.5 38 4-46 175-214 (1187)
63 PF14409 Herpeto_peptide: Ribo 21.7 1.2E+02 0.0026 23.3 3.2 22 325-346 20-42 (58)
64 COG1215 Glycosyltransferases, 21.1 97 0.0021 30.6 3.4 86 9-108 54-153 (439)
65 PF03993 DUF349: Domain of Unk 20.6 2.5E+02 0.0053 21.2 4.9 36 309-346 36-71 (77)
No 1
>PLN03180 reversibly glycosylated polypeptide; Provisional
Probab=100.00 E-value=1.5e-125 Score=915.71 Aligned_cols=343 Identities=56% Similarity=1.080 Sum_probs=338.9
Q ss_pred CCccCCCCCceEEEEEecccChHHHHHHHhhcccCceEEEEeCCCccccCCCCCCceEEeechhhhhhhccccchhh-cc
Q 039651 1 MALEHIDDSEVDIVIAALQSDLTSFLNAWRPLFSRFHLIIVQDPDLKGELKIPQGFDHRVYTKSDIDQVIGPTTSIV-FS 79 (353)
Q Consensus 1 ~~~~~~~~~~~~IVvttI~~~~~~fl~~~~~~~~~~~lvvV~D~d~~~~~ktP~g~~~~~~s~~~q~~~~~~~~~~i-~~ 79 (353)
|++++++++|+||||||| +++ +||++||++|+++|+|+|+|+|.+++++.|+||++++|++++|++++++++++| |+
T Consensus 3 ~~~~~~~~~evdIVi~TI-~~~-~fL~~~r~~l~~~h~iiV~d~D~~~~~~~~~G~d~~vy~r~d~~~~Lg~~~~~Ip~~ 80 (346)
T PLN03180 3 VSPAPLLKDELDIVIPTI-RNL-DFLEMWRPFFQPYHLIIVQDGDPSKEIKVPEGFDYELYNRNDINRILGPKASCISFK 80 (346)
T ss_pred CccCCCCCCcceEEEecc-Cch-hHHHHHHHhcCcccEEEEecCCcccceeccCCCceeecCHHHHHhhhcccccccccC
Confidence 578999999999999999 888 999999999999999999999999999999999999999999999999999999 99
Q ss_pred ccccceeeeeeEeeeeeeeccCCCCCCCCCCCCcchhhhhhhhcccCCCCcccccccccCCCCCCCcccCcCCCccCCCc
Q 039651 80 GYSCRYFGYLVSRKKYIISVDDDCLPAKDNDGNLTNAVSQHLANLTTPATPFFFNTLYDPFREGADFVRGYPFSLRSGVD 159 (353)
Q Consensus 80 s~arkn~GyL~a~a~~I~~~DDDn~P~~~~~g~~~d~~~~h~~nl~~~~t~~~~N~ly~p~~~~~~~pRGyP~s~r~~~~ 159 (353)
||+|||||||+|++||||+|||||+|++||.|+.|||++||+.||.+||||+||||||+|||+|++||||||||+|+|++
T Consensus 81 ~~a~R~fGyL~s~~~yivsiDDD~~Pa~d~~g~~i~~~~qH~~NL~~pstp~~fNtLYdp~r~g~~fvRGYPfS~R~gv~ 160 (346)
T PLN03180 81 DSACRCFGYLVSKKKYIFTIDDDCFVAKDPSGKLINALEQHIKNLLSPSTPFFFNTLYDPYREGADFVRGYPFSLREGVP 160 (346)
T ss_pred cccchhhhheeecceEEEEECCCCCCCCCCccccccHHHHHHHhcCCCCCCceeecccccCccCCcccCCCCccccCCcc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ceeeeccccCCCCCcccccccCCcccccccCCceeeecCCccccccchhhhhhhhhcccccccCccccCCCcccccchhh
Q 039651 160 CALSCGLWLNLADYDAPTQALKPEHRNLHYVDAVMTVPAGTLMPISGINIAFNRALVGPALFPGLKLTGEGKLRWETIED 239 (353)
Q Consensus 160 ~aisqGLw~~~PDvDAitrL~~~~~~~~~f~~~vvtl~~Gt~~P~nsqNtaF~r~a~~pa~yp~~~~~~~g~~~~~R~~D 239 (353)
|+||||||+|+|||||||||+++.|+|++|+++|||+|+|||+|||||||||+||++||||| +|+|++|+ +++|++|
T Consensus 161 vaiS~GLWln~PD~DA~t~l~k~~e~~t~yvdavvtip~gt~~pv~~~NlAF~ReligPA~y--~g~m~~g~-~i~R~dD 237 (346)
T PLN03180 161 TAVSHGLWLNIPDYDAPTQLVKPLERNTRYVDAVMTIPKGTLFPMCGMNLAFDRELIGPAMY--FGLMGDGQ-PIGRYDD 237 (346)
T ss_pred eEEecccccCCCcccchhhhccchhccceecccEEeccCCCEeecccchhhhhhhhcchhhe--ecccCCCC-cccchhh
Confidence 99999999999999999999999999999999999999999999999999999999999999 89999999 9999999
Q ss_pred hHHHHHHHHHHHHhCCeeeeccceeeecCCCCchhhhHhhhhhhhhhcchHHhhhcccCCCCCCCHHHHHHHHHHHHHhh
Q 039651 240 IWCGMCVKVICDHLSIGVKTGLPYVFRSDKGNPIESLKKEWEGVKKMEEIIPFFQSVRLPRTATTAEDCLLEMAKSVKDR 319 (353)
Q Consensus 240 IW~g~~~qri~~~lG~~V~fg~P~v~~~r~h~~l~Dl~~E~~g~~~~e~ii~fl~~~~~~~~a~t~~~c~~eLa~~v~~~ 319 (353)
||+|||+|+||+|+|++|+||.|||+|+|+||+|+||++|++|++++|+||+|||++++|++|+|+++||+|||++||++
T Consensus 238 iWsG~c~K~i~dhLG~gVktG~Pyv~h~k~~n~~~dL~~E~~Gi~l~E~i~~ff~~~~l~~~a~t~~~cy~ela~~vk~~ 317 (346)
T PLN03180 238 MWAGWCAKVICDHLGLGVKTGLPYIWHSKASNPFVNLKKEYKGIFWQEEIIPFFQSVRLPKEAVTVEDCYIELAKQVKEK 317 (346)
T ss_pred hHHHHHHHHHHHHhCcceecCCceEecCCcccHHHHHHhhccCeechHHHHHHHHhccCCcccCcHHHHHHHHHHHHHhh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCChHHHHHHHHHHHHHHHHHHhCCCC
Q 039651 320 LGGTDPLFARAAEAMVEWVKIWKAAGASH 348 (353)
Q Consensus 320 l~~~~~f~~~~a~~m~~W~~~l~~l~~~~ 348 (353)
++..+|||++++++|++|+++|+++|+++
T Consensus 318 l~~~d~~f~~~a~~M~~Wi~~w~~l~~~~ 346 (346)
T PLN03180 318 LGKVDPYFTKLADAMVTWIEAWKELNSPS 346 (346)
T ss_pred ccccCHHHHHHHHHHHHHHHHHHHhCCCC
Confidence 99999999999999999999999999863
No 2
>PF03214 RGP: Reversibly glycosylated polypeptide; InterPro: IPR004901 Alpha-1,4-glucan-protein synthase catalyses the reaction: protein + UDP-D-glucose = alpha-D-glucosyl-protein + UDP The enzyme has a possible role in the synthesis of cell wall polysaccharides in plants []. It is found associated with the cell wall, with the highest concentrations in the plasmodesmata. It is also located in the Golgi apparatus.; GO: 0008466 glycogenin glucosyltransferase activity, 0016758 transferase activity, transferring hexosyl groups, 0007047 cellular cell wall organization, 0030244 cellulose biosynthetic process, 0005618 cell wall, 0030054 cell junction
Probab=100.00 E-value=3.1e-119 Score=869.90 Aligned_cols=343 Identities=57% Similarity=1.063 Sum_probs=334.5
Q ss_pred CCccCCCCCceEEEEEecccChHHHHHHHhhcccCceEEEEeCCCccccCCCCCCceEEeechhhhhhhccccchhh-cc
Q 039651 1 MALEHIDDSEVDIVIAALQSDLTSFLNAWRPLFSRFHLIIVQDPDLKGELKIPQGFDHRVYTKSDIDQVIGPTTSIV-FS 79 (353)
Q Consensus 1 ~~~~~~~~~~~~IVvttI~~~~~~fl~~~~~~~~~~~lvvV~D~d~~~~~ktP~g~~~~~~s~~~q~~~~~~~~~~i-~~ 79 (353)
||+ +|+++|++|||+|||+++|+||++|||+|+++|||||+|+|..|++++|+||++++|+++++++++|+. ++| |+
T Consensus 1 ~~~-~~~~~~~divi~~~~~~l~~~~~~wr~~~~~~hliiv~d~~~~~~~~~p~g~~~~~y~~~di~~~lg~~-~~i~~~ 78 (348)
T PF03214_consen 1 MSL-EILDDEVDIVIPALRPNLTDFLEEWRPFFSPYHLIIVQDPDPNEEIKVPEGFDYEVYNRNDIERVLGAK-TLIPFK 78 (348)
T ss_pred CCc-ccccCcccEEeecccccHHHHHHHHHHhhcceeEEEEeCCCccccccCCcccceeeecHhhHHhhcCCc-cccccc
Confidence 788 999999999999997799999999999999999999999999999999999999999999999999998 889 99
Q ss_pred ccccceeeeeeEeeeeeeeccCCCCCCCCCCCCcchhhhhhhhcccCCCCcccccccccCCCCCCCcccCcCCCccCCCc
Q 039651 80 GYSCRYFGYLVSRKKYIISVDDDCLPAKDNDGNLTNAVSQHLANLTTPATPFFFNTLYDPFREGADFVRGYPFSLRSGVD 159 (353)
Q Consensus 80 s~arkn~GyL~a~a~~I~~~DDDn~P~~~~~g~~~d~~~~h~~nl~~~~t~~~~N~ly~p~~~~~~~pRGyP~s~r~~~~ 159 (353)
|++|||||||+|++||||+|||||+|++|+.|.+++.+.||+.|+.+||||+|||+||+||+++++||||||||+|+|++
T Consensus 79 ~~a~R~fGyL~s~~~yivsiDDD~~P~~D~~g~~~~~v~qh~~~~~~~st~~~fNtLyd~~~e~~~f~RGyPfS~Regv~ 158 (348)
T PF03214_consen 79 GDACRNFGYLVSKKDYIVSIDDDCLPAKDDFGTHIDAVAQHVENLSTPSTPFFFNTLYDPYREGADFPRGYPFSLREGVD 158 (348)
T ss_pred ccchhhhHhhhcccceEEEEccccccccCCccceehhhhccceeeeccCchhhhhhhcccccccCcccCCCCcccccCCc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ceeeeccccCCCCCcccccccCCcccccccCCceeeecCCccccccchhhhhhhhhcccccccCccccCCCcccccchh-
Q 039651 160 CALSCGLWLNLADYDAPTQALKPEHRNLHYVDAVMTVPAGTLMPISGINIAFNRALVGPALFPGLKLTGEGKLRWETIE- 238 (353)
Q Consensus 160 ~aisqGLw~~~PDvDAitrL~~~~~~~~~f~~~vvtl~~Gt~~P~nsqNtaF~r~a~~pa~yp~~~~~~~g~~~~~R~~- 238 (353)
+++|||||+|+|||||||||+++.+++++|+++++|+|+|||+|||||||||+||++||+|| ++.|+.|+ +++|++
T Consensus 159 ~~~s~GLWln~PD~DA~t~l~~~~~r~~~~~d~~~~~p~gt~~pv~s~NlAf~Relip~~~~--~~~~~~~~-~~~R~d~ 235 (348)
T PF03214_consen 159 TAASAGLWLNVPDLDAPTQLVKPTERNTRYVDAVLTIPRGTYLPVCSMNLAFDRELIPPAYY--FPMMGNGW-GIGRFDR 235 (348)
T ss_pred eeeecccccCCcccchhhhhccchhccccccCceEEecCCCEeecccchhhhhhhhcChhee--cccccCCC-ccccccc
Confidence 99999999999999999999999999999999999999999999999999999999988888 55577776 999888
Q ss_pred --hhHHHHHHHHHHHHhCCeeeeccceeeecCCCCchhhhHhhhhhhhhhcchHHhhhcccCCCCCCCHHHHHHHHHHHH
Q 039651 239 --DIWCGMCVKVICDHLSIGVKTGLPYVFRSDKGNPIESLKKEWEGVKKMEEIIPFFQSVRLPRTATTAEDCLLEMAKSV 316 (353)
Q Consensus 239 --DIW~g~~~qri~~~lG~~V~fg~P~v~~~r~h~~l~Dl~~E~~g~~~~e~ii~fl~~~~~~~~a~t~~~c~~eLa~~v 316 (353)
|||+|||+|+||+|+|++|+||.|||+|+|+||+|+||++|++|++++|+|++|||++++|+++.++++||+|||+++
T Consensus 236 ~gDIWsG~f~k~~~d~Lg~~V~~G~P~v~H~~a~~~~~dL~~E~~Gi~l~E~i~~f~q~v~Ls~~A~t~~dcy~ELA~~V 315 (348)
T PF03214_consen 236 FGDIWSGYFLKVICDHLGHGVKTGLPYVWHNKAHNAFDDLKKEVPGIELNEDILPFFQSVKLSKTAVTVEDCYRELAKQV 315 (348)
T ss_pred chhHHHHHHHHHHHHHcCCccccCCceEEecCCCchHHHHHhhccchhhHHHHHHHHhccCCCcccccHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhhcCCCChHHHHHHHHHHHHHHHHHHhCCCC
Q 039651 317 KDRLGGTDPLFARAAEAMVEWVKIWKAAGASH 348 (353)
Q Consensus 317 ~~~l~~~~~f~~~~a~~m~~W~~~l~~l~~~~ 348 (353)
++++++++|||++.+++|++||++|++|||++
T Consensus 316 kekLg~~dp~F~kvAdaMv~WI~AW~~lns~~ 347 (348)
T PF03214_consen 316 KEKLGSVDPYFTKVADAMVAWIKAWKELNSGS 347 (348)
T ss_pred HHhccCcChHHHHHHHHHHHHHHHHHHhCCCC
Confidence 99999999999999999999999999999864
No 3
>PF03385 DUF288: Protein of unknown function, DUF288; InterPro: IPR005049 This is a protein family of unknown function.
Probab=99.94 E-value=8.4e-27 Score=228.66 Aligned_cols=105 Identities=16% Similarity=0.310 Sum_probs=99.8
Q ss_pred chhhhHHHHHHHHHHHHhCCeeeeccceeeecC-CCCchhhhHhhhhhhhhhcchHHhhhcccCCC-CCCCHHHHHHHHH
Q 039651 236 TIEDIWCGMCVKVICDHLSIGVKTGLPYVFRSD-KGNPIESLKKEWEGVKKMEEIIPFFQSVRLPR-TATTAEDCLLEMA 313 (353)
Q Consensus 236 R~~DIW~g~~~qri~~~lG~~V~fg~P~v~~~r-~h~~l~Dl~~E~~g~~~~e~ii~fl~~~~~~~-~a~t~~~c~~eLa 313 (353)
|++|||||||+|||+|.+|++|+|++|.|+|.| +|+|++||++|+++|+.+|+|++||++|+|+. ++.++++|+.+|+
T Consensus 1 RvTDIWRSY~aQRLLW~~G~~VsF~PpnV~Q~RNaHdYLkDF~DEk~LY~~sG~LV~FL~~W~~~~~n~~~L~~~Il~L~ 80 (390)
T PF03385_consen 1 RVTDIWRSYWAQRLLWLSGGTVSFVPPNVVQFRNAHDYLKDFKDEKDLYEDSGRLVEFLHEWRCSKGNSSTLFECILDLY 80 (390)
T ss_pred CchhHHHHHHHHHHHHHcCCeEEEcCCceeecccccccccchHHHHHHHHhHHHHHHHHHhcCCCCCchhhHHHHHHHHH
Confidence 899999999999999999999999999999998 99999999999999999999999999999975 3567999999999
Q ss_pred HHHHhhcCCCChHHH-HHHHHHHHHHHHHHHhC
Q 039651 314 KSVKDRLGGTDPLFA-RAAEAMVEWVKIWKAAG 345 (353)
Q Consensus 314 ~~v~~~l~~~~~f~~-~~a~~m~~W~~~l~~l~ 345 (353)
..|.++ +||. +++++|++||+||+++|
T Consensus 81 ~~m~e~-----GfW~~~Dv~L~~AWL~DL~sVG 108 (390)
T PF03385_consen 81 VAMAEE-----GFWGEEDVKLMQAWLQDLKSVG 108 (390)
T ss_pred HHHHHc-----CCCcHHHHHHHHHHHHHHHHHH
Confidence 999998 8885 79999999999999997
No 4
>cd02520 Glucosylceramide_synthase Glucosylceramide synthase catalyzes the first glycosylation step of glycosphingolipid synthesis. UDP-glucose:N-acylsphingosine D-glucosyltransferase (glucosylceramide synthase or ceramide glucosyltransferase) catalyzes the first glycosylation step of glycosphingolipid synthesis. Its product, glucosylceramide, serves as the core of more than 300 glycosphingolipids (GSL). GSLs are a group of membrane components that have the lipid portion embedded in the outer plasma membrane leaflet and the sugar chains extended to the outer environment. Several lines of evidence suggest the importance of GSLs in various cellular processes such as differentiation, adhesion, proliferation, and cell-cell recognition. In pathogenic fungus Cryptococcus neoformans, glucosylceramide serves as an antigen that elicits an antibody response in patients and it is essential for fungal growth in host extracellular environment.
Probab=92.27 E-value=0.14 Score=45.35 Aligned_cols=23 Identities=26% Similarity=0.325 Sum_probs=18.0
Q ss_pred eeeeeEeeeeeeeccCCCCCCCC
Q 039651 86 FGYLVSRKKYIISVDDDCLPAKD 108 (353)
Q Consensus 86 ~GyL~a~a~~I~~~DDDn~P~~~ 108 (353)
.|+=.|..+||+.+|+|+.+..+
T Consensus 80 ~g~~~a~~d~i~~~D~D~~~~~~ 102 (196)
T cd02520 80 KGYEEARYDILVISDSDISVPPD 102 (196)
T ss_pred HHHHhCCCCEEEEECCCceEChh
Confidence 45555568999999999998654
No 5
>PF00535 Glycos_transf_2: Glycosyl transferase family 2; InterPro: IPR001173 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. This domain is found in a diverse family of glycosyl transferases that transfer the sugar from UDP-glucose, UDP-N-acetyl-galactosamine, GDP-mannose or CDP-abequose, to a range of substrates including cellulose, dolichol phosphate and teichoic acids.; PDB: 2Z87_A 2Z86_B 2D7R_A 2D7I_A 3CKN_A 3CKQ_A 3CKJ_A 3CKV_A 3CKO_A 2FFU_A ....
Probab=92.23 E-value=0.055 Score=44.45 Aligned_cols=84 Identities=20% Similarity=0.306 Sum_probs=48.0
Q ss_pred EEEEEecccCh---HHHHHHHhhc-ccCceEEEEeCCCccccCCCCCCceEEeechhhhhhhcc--ccchhh-----ccc
Q 039651 12 DIVIAALQSDL---TSFLNAWRPL-FSRFHLIIVQDPDLKGELKIPQGFDHRVYTKSDIDQVIG--PTTSIV-----FSG 80 (353)
Q Consensus 12 ~IVvttI~~~~---~~fl~~~~~~-~~~~~lvvV~D~d~~~~~ktP~g~~~~~~s~~~q~~~~~--~~~~~i-----~~s 80 (353)
.|||||. +.. .++|++.++. ...+++|||-|+ .++. +.+-.+++.. .....+ ...
T Consensus 1 Svvip~~-n~~~~l~~~l~sl~~q~~~~~eiivvdd~------s~d~-------~~~~~~~~~~~~~~i~~i~~~~n~g~ 66 (169)
T PF00535_consen 1 SVVIPTY-NEAEYLERTLESLLKQTDPDFEIIVVDDG------STDE-------TEEILEEYAESDPNIRYIRNPENLGF 66 (169)
T ss_dssp EEEEEES-S-TTTHHHHHHHHHHHSGCEEEEEEEECS-------SSS-------HHHHHHHHHCCSTTEEEEEHCCCSHH
T ss_pred CEEEEee-CCHHHHHHHHHHHhhccCCCEEEEEeccc------cccc-------cccccccccccccccccccccccccc
Confidence 5899998 543 3555555544 346779999984 2222 2333333322 111122 122
Q ss_pred cccceeeeeeEeeeeeeeccCCCCCCCCC
Q 039651 81 YSCRYFGYLVSRKKYIISVDDDCLPAKDN 109 (353)
Q Consensus 81 ~arkn~GyL~a~a~~I~~~DDDn~P~~~~ 109 (353)
.+.+|.|.-.|..+||+.+|||+.+..++
T Consensus 67 ~~~~n~~~~~a~~~~i~~ld~D~~~~~~~ 95 (169)
T PF00535_consen 67 SAARNRGIKHAKGEYILFLDDDDIISPDW 95 (169)
T ss_dssp HHHHHHHHHH--SSEEEEEETTEEE-TTH
T ss_pred cccccccccccceeEEEEeCCCceEcHHH
Confidence 44566777777799999999999999864
No 6
>PF13641 Glyco_tranf_2_3: Glycosyltransferase like family 2; PDB: 4FIY_B 4FIX_A.
Probab=92.12 E-value=0.11 Score=46.58 Aligned_cols=65 Identities=12% Similarity=0.110 Sum_probs=32.1
Q ss_pred cccccchhhhhhhhhcccccccCccccCCCcccccchhhhHHHHHHHHHHHHhCCeeeecc-ceeeecCCCCchhhhHhh
Q 039651 201 LMPISGINIAFNRALVGPALFPGLKLTGEGKLRWETIEDIWCGMCVKVICDHLSIGVKTGL-PYVFRSDKGNPIESLKKE 279 (353)
Q Consensus 201 ~~P~nsqNtaF~r~a~~pa~yp~~~~~~~g~~~~~R~~DIW~g~~~qri~~~lG~~V~fg~-P~v~~~r~h~~l~Dl~~E 279 (353)
..++++.|.+|+|+++ -.+- ...+ ....+|..-+.- +...|+.+.+-+ ..|+|..+++ ++++.++
T Consensus 156 ~~~~~G~~~~~rr~~~-~~~g----~fd~----~~~~eD~~l~~r----~~~~G~~~~~~~~~~v~~~~~~~-~~~~~~q 221 (228)
T PF13641_consen 156 VAFLSGSGMLFRRSAL-EEVG----GFDP----FILGEDFDLCLR----LRAAGWRIVYAPDALVYHEEPSS-LKAFFKQ 221 (228)
T ss_dssp -S-B--TEEEEEHHHH-HHH-----S--S----SSSSHHHHHHHH----HHHTT--EEEEEEEEEEE--SSS-THHHHHH
T ss_pred eeeccCcEEEEEHHHH-HHhC----CCCC----CCcccHHHHHHH----HHHCCCcEEEECCcEEEEeCCCC-HHHHHHH
Confidence 3567899999999999 3331 0001 122367643332 333999999954 3577776644 5555443
No 7
>cd06437 CESA_CaSu_A2 Cellulose synthase catalytic subunit A2 (CESA2) is a catalytic subunit or a catalytic subunit substitute of the cellulose synthase complex. Cellulose synthase (CESA) catalyzes the polymerization reaction of cellulose using UDP-glucose as the substrate. Cellulose is an aggregate of unbranched polymers of beta-1,4-linked glucose residues, which is an abundant polysaccharide produced by plants and in varying degrees by several other organisms including algae, bacteria, fungi, and even some animals. Genomes from higher plants harbor multiple CESA genes. There are ten in Arabidopsis. At least three different CESA proteins are required to form a functional complex. In Arabidopsis, CESA1, 3 and 6 and CESA4, 7 and 8, are required for cellulose biosynthesis during primary and secondary cell wall formation. CESA2 is very closely related to CESA6 and is viewed as a prime substitute for CESA6. They functionally compensate each other. The cesa2 and cesa6 double mutant plants we
Probab=91.56 E-value=0.44 Score=43.08 Aligned_cols=25 Identities=28% Similarity=0.452 Sum_probs=21.3
Q ss_pred ceeeeeeEeeeeeeeccCCCCCCCC
Q 039651 84 RYFGYLVSRKKYIISVDDDCLPAKD 108 (353)
Q Consensus 84 kn~GyL~a~a~~I~~~DDDn~P~~~ 108 (353)
.|.|+-.|..+||+.+|.|+.+..+
T Consensus 79 ~n~g~~~a~~~~i~~~DaD~~~~~~ 103 (232)
T cd06437 79 LAEGMKVAKGEYVAIFDADFVPPPD 103 (232)
T ss_pred HHHHHHhCCCCEEEEEcCCCCCChH
Confidence 4677777779999999999999775
No 8
>PLN02726 dolichyl-phosphate beta-D-mannosyltransferase
Probab=90.48 E-value=0.22 Score=45.86 Aligned_cols=94 Identities=14% Similarity=0.186 Sum_probs=49.0
Q ss_pred CCccCCCCCceEEEEEecccCh---HHHHHHHhhcc---cCceEEEEeCCCccccCCCCCCceEEeechhhhhhhccccc
Q 039651 1 MALEHIDDSEVDIVIAALQSDL---TSFLNAWRPLF---SRFHLIIVQDPDLKGELKIPQGFDHRVYTKSDIDQVIGPTT 74 (353)
Q Consensus 1 ~~~~~~~~~~~~IVvttI~~~~---~~fl~~~~~~~---~~~~lvvV~D~d~~~~~ktP~g~~~~~~s~~~q~~~~~~~~ 74 (353)
|+.+.-..-++.||||+. ++. ..+++..++.+ ..+++|||-|+.+ ++ |.+-.+++.....
T Consensus 1 ~~~~~~~~~~vsVvIp~y-ne~~~l~~~l~~l~~~~~~~~~~eiivvDdgS~-------D~------t~~i~~~~~~~~~ 66 (243)
T PLN02726 1 MEAPGEGAMKYSIIVPTY-NERLNIALIVYLIFKALQDVKDFEIIVVDDGSP-------DG------TQDVVKQLQKVYG 66 (243)
T ss_pred CCCCCCCCceEEEEEccC-CchhhHHHHHHHHHHHhccCCCeEEEEEeCCCC-------CC------HHHHHHHHHHhcC
Confidence 344334455799999999 544 13333444333 3678999988422 11 1222222211111
Q ss_pred --h--hhcc----c-cccceeeeeeEeeeeeeeccCCCCCCCC
Q 039651 75 --S--IVFS----G-YSCRYFGYLVSRKKYIISVDDDCLPAKD 108 (353)
Q Consensus 75 --~--~i~~----s-~arkn~GyL~a~a~~I~~~DDDn~P~~~ 108 (353)
. .+.. + .+-.|-|+-.|..+||+.+|.|+.+..+
T Consensus 67 ~~~v~~~~~~~n~G~~~a~n~g~~~a~g~~i~~lD~D~~~~~~ 109 (243)
T PLN02726 67 EDRILLRPRPGKLGLGTAYIHGLKHASGDFVVIMDADLSHHPK 109 (243)
T ss_pred CCcEEEEecCCCCCHHHHHHHHHHHcCCCEEEEEcCCCCCCHH
Confidence 1 1110 1 1123445555568999999999997553
No 9
>TIGR03472 HpnI hopanoid biosynthesis associated glycosyl transferase protein HpnI. This family of genes include a glycosyl transferase, group 2 domain (pfam00535) which are responsible, generally for the transfer of nucleotide-diphosphate sugars to substrates such as polysaccharides and lipids. The member of this clade from Acidithiobacillus ferrooxidans ATCC 23270 (AFE_0974) is found in the same locus as squalene-hopene cyclase (SHC, TIGR01507) and other genes associated with the biosynthesis of hopanoid natural products. Similarly, in Ralstonia eutropha JMP134 (Reut_B4902) this gene is adjacent to HpnAB, IspH and HpnH (TIGR03470), although SHC itself is elsewhere in the genome. Notably, this gene (here named HpnI) and three others form a conserved set (HpnIJKL) which occur in a subset of all genomes containing the SHC enzyme. This relationship was discerned using the method of partial phylogenetic profiling. This group includes Zymomonas mobilis, the organism where the initial hopano
Probab=90.38 E-value=0.42 Score=47.54 Aligned_cols=65 Identities=20% Similarity=0.235 Sum_probs=37.0
Q ss_pred cccchhhhhhhhhcccccccCccccCCCcccccchhhhHHHHHHHHHHHHhCCeeeeccceeeecCCCCchhhhHh
Q 039651 203 PISGINIAFNRALVGPALFPGLKLTGEGKLRWETIEDIWCGMCVKVICDHLSIGVKTGLPYVFRSDKGNPIESLKK 278 (353)
Q Consensus 203 P~nsqNtaF~r~a~~pa~yp~~~~~~~g~~~~~R~~DIW~g~~~qri~~~lG~~V~fg~P~v~~~r~h~~l~Dl~~ 278 (353)
..+++|.+|+|+++ .-.-+-..+.-.-.+|.+=+ +.+...|+.|.+-+..+.++.....++++.+
T Consensus 199 ~~~G~~~a~RR~~l-------~~iGGf~~~~~~~~ED~~l~----~~i~~~G~~v~~~~~~v~~~~~~~s~~~~~~ 263 (373)
T TIGR03472 199 FCFGATMALRRATL-------EAIGGLAALAHHLADDYWLG----ELVRALGLRVVLAPVVVDTDVHETSFATLLA 263 (373)
T ss_pred cccChhhheeHHHH-------HHcCChHHhcccchHHHHHH----HHHHHcCCeEEecchhhhcCCCccCHHHHHH
Confidence 35799999999999 22111100000113565433 3345679999996556666664455555543
No 10
>cd06421 CESA_CelA_like CESA_CelA_like are involved in the elongation of the glucan chain of cellulose. Family of proteins related to Agrobacterium tumefaciens CelA and Gluconacetobacter xylinus BscA. These proteins are involved in the elongation of the glucan chain of cellulose, an aggregate of unbranched polymers of beta-1,4-linked glucose residues. They are putative catalytic subunit of cellulose synthase, which is a glycosyltransferase using UDP-glucose as the substrate. The catalytic subunit is an integral membrane protein with 6 transmembrane segments and it is postulated that the protein is anchored in the membrane at the N-terminal end.
Probab=90.38 E-value=0.17 Score=45.08 Aligned_cols=85 Identities=12% Similarity=0.152 Sum_probs=46.3
Q ss_pred ceEEEEEecccChHHHHHHHhhcc-----cC--ceEEEEeCCCccccCCCCCCceEEeechhhhhhhcccc-chhh----
Q 039651 10 EVDIVIAALQSDLTSFLNAWRPLF-----SR--FHLIIVQDPDLKGELKIPQGFDHRVYTKSDIDQVIGPT-TSIV---- 77 (353)
Q Consensus 10 ~~~IVvttI~~~~~~fl~~~~~~~-----~~--~~lvvV~D~d~~~~~ktP~g~~~~~~s~~~q~~~~~~~-~~~i---- 77 (353)
.+.||||+.+.+. +.+++.-+.+ .. +.+|||-|+ .+.. +.+-.+++.... ...+
T Consensus 2 ~vsviip~~n~~~-~~l~~~l~sl~~q~~~~~~~eiivvdd~------s~d~-------t~~~~~~~~~~~~~~~~~~~~ 67 (234)
T cd06421 2 TVDVFIPTYNEPL-EIVRKTLRAALAIDYPHDKLRVYVLDDG------RRPE-------LRALAAELGVEYGYRYLTRPD 67 (234)
T ss_pred ceEEEEecCCCcH-HHHHHHHHHHHhcCCCcccEEEEEEcCC------Cchh-------HHHHHHHhhcccCceEEEeCC
Confidence 4789999994444 4454432222 34 789999874 2222 111122211100 0011
Q ss_pred cccc--ccceeeeeeEeeeeeeeccCCCCCCCC
Q 039651 78 FSGY--SCRYFGYLVSRKKYIISVDDDCLPAKD 108 (353)
Q Consensus 78 ~~s~--arkn~GyL~a~a~~I~~~DDDn~P~~~ 108 (353)
-.++ +..|.|+-.|..+||+.+|+|+.+..+
T Consensus 68 ~~~~~~~~~n~~~~~a~~d~i~~lD~D~~~~~~ 100 (234)
T cd06421 68 NRHAKAGNLNNALAHTTGDFVAILDADHVPTPD 100 (234)
T ss_pred CCCCcHHHHHHHHHhCCCCEEEEEccccCcCcc
Confidence 1111 124566666669999999999999764
No 11
>cd06434 GT2_HAS Hyaluronan synthases catalyze polymerization of hyaluronan. Hyaluronan synthases (HASs) are bi-functional glycosyltransferases that catalyze polymerization of hyaluronan. HASs transfer both GlcUA and GlcNAc in beta-(1,3) and beta-(1,4) linkages, respectively to the hyaluronan chain using UDP-GlcNAc and UDP-GlcUA as substrates. HA is made as a free glycan, not attached to a protein or lipid. HASs do not need a primer for HA synthesis; they initiate HA biosynthesis de novo with only UDP-GlcNAc, UDP-GlcUA, and Mg2+. Hyaluronan (HA) is a linear heteropolysaccharide composed of (1-3)-linked beta-D-GlcUA-beta-D-GlcNAc disaccharide repeats. It can be found in vertebrates and a few microbes and is typically on the cell surface or in the extracellular space, but is also found inside mammalian cells. Hyaluronan has several physiochemical and biological functions such as space filling, lubrication, and providing a hydrated matrix through which cells can migrate.
Probab=89.95 E-value=0.36 Score=43.24 Aligned_cols=25 Identities=12% Similarity=0.109 Sum_probs=20.5
Q ss_pred eeeeeeEeeeeeeeccCCCCCCCCC
Q 039651 85 YFGYLVSRKKYIISVDDDCLPAKDN 109 (353)
Q Consensus 85 n~GyL~a~a~~I~~~DDDn~P~~~~ 109 (353)
|.|+-.|..+||+.+|+|+.+..++
T Consensus 70 n~g~~~a~~d~v~~lD~D~~~~~~~ 94 (235)
T cd06434 70 AEGIRHVTTDIVVLLDSDTVWPPNA 94 (235)
T ss_pred HHHHHHhCCCEEEEECCCceeChhH
Confidence 4566666699999999999999864
No 12
>cd06427 CESA_like_2 CESA_like_2 is a member of the cellulose synthase superfamily. The cellulose synthase (CESA) superfamily includes a wide variety of glycosyltransferase family 2 enzymes that share the common characteristic of catalyzing the elongation of polysaccharide chains. The members include cellulose synthase catalytic subunit, chitin synthase, Glucan Biosynthesis protein and other families of CESA-like proteins. Cellulose synthase catalyzes the polymerization reaction of cellulose, an aggregate of unbranched polymers of beta-1,4-linked glucose residues in plants, most algae, some bacteria and fungi, and even some animals. In bacteria, algae and lower eukaryotes, there is a second unrelated type of cellulose synthase (Type II), which produces acylated cellulose, a derivative of cellulose. Chitin synthase catalyzes the incorporation of GlcNAc from substrate UDP-GlcNAc into chitin, which is a linear homopolymer of beta-(1,4)-linked GlcNAc residues and Glucan Biosynthesis prot
Probab=89.56 E-value=0.19 Score=46.06 Aligned_cols=28 Identities=18% Similarity=0.398 Sum_probs=24.2
Q ss_pred ccceeeeeeEeeeeeeeccCCCCCCCCC
Q 039651 82 SCRYFGYLVSRKKYIISVDDDCLPAKDN 109 (353)
Q Consensus 82 arkn~GyL~a~a~~I~~~DDDn~P~~~~ 109 (353)
+.+|.|+-.|..+||+.+|+|+.+..++
T Consensus 74 ~a~n~g~~~a~gd~i~~~DaD~~~~~~~ 101 (241)
T cd06427 74 KACNYALAFARGEYVVIYDAEDAPDPDQ 101 (241)
T ss_pred HHHHHHHHhcCCCEEEEEcCCCCCChHH
Confidence 4677899888899999999999988763
No 13
>cd06433 GT_2_WfgS_like WfgS and WfeV are involved in O-antigen biosynthesis. Escherichia coli WfgS and Shigella dysenteriae WfeV are glycosyltransferase 2 family enzymes involved in O-antigen biosynthesis. GT-2 enzymes have GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.
Probab=88.27 E-value=0.44 Score=40.73 Aligned_cols=27 Identities=11% Similarity=-0.021 Sum_probs=21.9
Q ss_pred ccceeeeeeEeeeeeeeccCCCCCCCC
Q 039651 82 SCRYFGYLVSRKKYIISVDDDCLPAKD 108 (353)
Q Consensus 82 arkn~GyL~a~a~~I~~~DDDn~P~~~ 108 (353)
..+|.|+-.|.++||+.+|+|+.+..+
T Consensus 65 ~a~n~~~~~a~~~~v~~ld~D~~~~~~ 91 (202)
T cd06433 65 DAMNKGIALATGDIIGFLNSDDTLLPG 91 (202)
T ss_pred HHHHHHHHHcCCCEEEEeCCCcccCch
Confidence 345667777779999999999999876
No 14
>cd04195 GT2_AmsE_like GT2_AmsE_like is involved in exopolysaccharide amylovora biosynthesis. AmsE is a glycosyltransferase involved in exopolysaccharide amylovora biosynthesis in Erwinia amylovora. Amylovara is one of the three exopolysaccharide produced by E. amylovora. Amylovara-deficient mutants are non-pathogenic. It is a subfamily of Glycosyltransferase Family GT2, which includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds.
Probab=86.74 E-value=0.32 Score=42.47 Aligned_cols=27 Identities=15% Similarity=0.175 Sum_probs=22.8
Q ss_pred ccceeeeeeEeeeeeeeccCCCCCCCC
Q 039651 82 SCRYFGYLVSRKKYIISVDDDCLPAKD 108 (353)
Q Consensus 82 arkn~GyL~a~a~~I~~~DDDn~P~~~ 108 (353)
..+|.|+..|..+||+.+|+|..+..+
T Consensus 70 ~a~N~g~~~a~gd~i~~lD~Dd~~~~~ 96 (201)
T cd04195 70 KALNEGLKHCTYDWVARMDTDDISLPD 96 (201)
T ss_pred HHHHHHHHhcCCCEEEEeCCccccCcH
Confidence 346788888889999999999998875
No 15
>cd06442 DPM1_like DPM1_like represents putative enzymes similar to eukaryotic DPM1. Proteins similar to eukaryotic DPM1, including enzymes from bacteria and archaea; DPM1 is the catalytic subunit of eukaryotic dolichol-phosphate mannose (DPM) synthase. DPM synthase is required for synthesis of the glycosylphosphatidylinositol (GPI) anchor, N-glycan precursor, protein O-mannose, and C-mannose. In higher eukaryotes,the enzyme has three subunits, DPM1, DPM2 and DPM3. DPM is synthesized from dolichol phosphate and GDP-Man on the cytosolic surface of the ER membrane by DPM synthase and then is flipped onto the luminal side and used as a donor substrate. In lower eukaryotes, such as Saccharomyces cerevisiae and Trypanosoma brucei, DPM synthase consists of a single component (Dpm1p and TbDpm1, respectively) that possesses one predicted transmembrane region near the C terminus for anchoring to the ER membrane. In contrast, the Dpm1 homologues of higher eukaryotes, namely fission yeast, fungi,
Probab=86.12 E-value=0.57 Score=41.52 Aligned_cols=27 Identities=22% Similarity=0.305 Sum_probs=22.6
Q ss_pred ccceeeeeeEeeeeeeeccCCCCCCCC
Q 039651 82 SCRYFGYLVSRKKYIISVDDDCLPAKD 108 (353)
Q Consensus 82 arkn~GyL~a~a~~I~~~DDDn~P~~~ 108 (353)
..+|.|+-.|..+||+.+|+|+.+..+
T Consensus 68 ~a~n~g~~~a~gd~i~~lD~D~~~~~~ 94 (224)
T cd06442 68 SAYIEGFKAARGDVIVVMDADLSHPPE 94 (224)
T ss_pred HHHHHHHHHcCCCEEEEEECCCCCCHH
Confidence 456788888889999999999998654
No 16
>PRK10018 putative glycosyl transferase; Provisional
Probab=84.01 E-value=1.4 Score=42.70 Aligned_cols=86 Identities=15% Similarity=0.195 Sum_probs=49.6
Q ss_pred ceEEEEEecccChHHHHHHHhh-----cccCceEEEEeCCCccccCCCCCCceEEeechhhhhhhccccchhh-c----c
Q 039651 10 EVDIVIAALQSDLTSFLNAWRP-----LFSRFHLIIVQDPDLKGELKIPQGFDHRVYTKSDIDQVIGPTTSIV-F----S 79 (353)
Q Consensus 10 ~~~IVvttI~~~~~~fl~~~~~-----~~~~~~lvvV~D~d~~~~~ktP~g~~~~~~s~~~q~~~~~~~~~~i-~----~ 79 (353)
.+.|||||. +.. +++++--+ ....|.+|||-|+.+ +++ . ..+..++........+ - .
T Consensus 6 ~VSVIip~y-N~~-~~l~~~l~Svl~Qt~~~~EiIVVDDgS~-----~~~-----~-~~~~~~~~~~~ri~~i~~~~n~G 72 (279)
T PRK10018 6 LISIYMPTW-NRQ-QLAIRAIKSVLRQDYSNWEMIIVDDCST-----SWE-----Q-LQQYVTALNDPRITYIHNDINSG 72 (279)
T ss_pred EEEEEEEeC-CCH-HHHHHHHHHHHhCCCCCeEEEEEECCCC-----CHH-----H-HHHHHHHcCCCCEEEEECCCCCC
Confidence 489999999 655 44443222 245789999999422 110 0 0111111111111222 1 1
Q ss_pred ccccceeeeeeEeeeeeeeccCCCCCCCC
Q 039651 80 GYSCRYFGYLVSRKKYIISVDDDCLPAKD 108 (353)
Q Consensus 80 s~arkn~GyL~a~a~~I~~~DDDn~P~~~ 108 (353)
-.+.+|.|.-.|..+||..+|+|.....+
T Consensus 73 ~~~a~N~gi~~a~g~~I~~lDaDD~~~p~ 101 (279)
T PRK10018 73 ACAVRNQAIMLAQGEYITGIDDDDEWTPN 101 (279)
T ss_pred HHHHHHHHHHHcCCCEEEEECCCCCCCcc
Confidence 23456888888889999999999987764
No 17
>cd06423 CESA_like CESA_like is the cellulose synthase superfamily. The cellulose synthase (CESA) superfamily includes a wide variety of glycosyltransferase family 2 enzymes that share the common characteristic of catalyzing the elongation of polysaccharide chains. The members include cellulose synthase catalytic subunit, chitin synthase, glucan biosynthesis protein and other families of CESA-like proteins. Cellulose synthase catalyzes the polymerization reaction of cellulose, an aggregate of unbranched polymers of beta-1,4-linked glucose residues in plants, most algae, some bacteria and fungi, and even some animals. In bacteria, algae and lower eukaryotes, there is a second unrelated type of cellulose synthase (Type II), which produces acylated cellulose, a derivative of cellulose. Chitin synthase catalyzes the incorporation of GlcNAc from substrate UDP-GlcNAc into chitin, which is a linear homopolymer of beta-(1,4)-linked GlcNAc residues and Glucan Biosynthesis protein catalyzes the
Probab=83.80 E-value=1.4 Score=35.77 Aligned_cols=27 Identities=15% Similarity=0.250 Sum_probs=20.8
Q ss_pred ccceeeeeeEeeeeeeeccCCCCCCCC
Q 039651 82 SCRYFGYLVSRKKYIISVDDDCLPAKD 108 (353)
Q Consensus 82 arkn~GyL~a~a~~I~~~DDDn~P~~~ 108 (353)
..+|.|+-.+..+||..+|+|..+..+
T Consensus 68 ~~~n~~~~~~~~~~i~~~D~D~~~~~~ 94 (180)
T cd06423 68 GALNAGLRHAKGDIVVVLDADTILEPD 94 (180)
T ss_pred HHHHHHHHhcCCCEEEEECCCCCcChH
Confidence 344566666669999999999999764
No 18
>cd04196 GT_2_like_d Subfamily of Glycosyltransferase Family GT2 of unknown function. GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.
Probab=83.04 E-value=1.6 Score=37.95 Aligned_cols=24 Identities=17% Similarity=0.081 Sum_probs=18.3
Q ss_pred eeeeeeEeeeeeeeccCCCCCCCC
Q 039651 85 YFGYLVSRKKYIISVDDDCLPAKD 108 (353)
Q Consensus 85 n~GyL~a~a~~I~~~DDDn~P~~~ 108 (353)
|.|+..+..+||+.+|+|.....+
T Consensus 72 n~g~~~~~g~~v~~ld~Dd~~~~~ 95 (214)
T cd04196 72 ESLLQAADGDYVFFCDQDDIWLPD 95 (214)
T ss_pred HHHHHhCCCCEEEEECCCcccChh
Confidence 346555559999999999888764
No 19
>cd02525 Succinoglycan_BP_ExoA ExoA is involved in the biosynthesis of succinoglycan. Succinoglycan Biosynthesis Protein ExoA catalyzes the formation of a beta-1,3 linkage of the second sugar (glucose) of the succinoglycan with the galactose on the lipid carrie. Succinoglycan is an acidic exopolysaccharide that is important for invasion of the nodules. Succinoglycan is a high-molecular-weight polymer composed of repeating octasaccharide units. These units are synthesized on membrane-bound isoprenoid lipid carriers, beginning with galactose followed by seven glucose molecules, and modified by the addition of acetate, succinate, and pyruvate. ExoA is a membrane protein with a transmembrance domain at c-terminus.
Probab=82.04 E-value=1.6 Score=39.02 Aligned_cols=26 Identities=35% Similarity=0.333 Sum_probs=21.2
Q ss_pred cceeeeeeEeeeeeeeccCCCCCCCC
Q 039651 83 CRYFGYLVSRKKYIISVDDDCLPAKD 108 (353)
Q Consensus 83 rkn~GyL~a~a~~I~~~DDDn~P~~~ 108 (353)
.+|.|+-.|..+||+.+|+|+.+..+
T Consensus 72 a~N~g~~~a~~d~v~~lD~D~~~~~~ 97 (249)
T cd02525 72 GLNIGIRNSRGDIIIRVDAHAVYPKD 97 (249)
T ss_pred HHHHHHHHhCCCEEEEECCCccCCHH
Confidence 46777777779999999999998653
No 20
>cd04192 GT_2_like_e Subfamily of Glycosyltransferase Family GT2 of unknown function. GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.
Probab=81.94 E-value=0.95 Score=39.90 Aligned_cols=24 Identities=17% Similarity=0.457 Sum_probs=18.8
Q ss_pred eeeeeeEeeeeeeeccCCCCCCCC
Q 039651 85 YFGYLVSRKKYIISVDDDCLPAKD 108 (353)
Q Consensus 85 n~GyL~a~a~~I~~~DDDn~P~~~ 108 (353)
|.|.-.+..+||+.+|+|+.+..+
T Consensus 75 n~g~~~~~~d~i~~~D~D~~~~~~ 98 (229)
T cd04192 75 TTAIKAAKGDWIVTTDADCVVPSN 98 (229)
T ss_pred HHHHHHhcCCEEEEECCCcccCHH
Confidence 445555559999999999999864
No 21
>cd06420 GT2_Chondriotin_Pol_N N-terminal domain of Chondroitin polymerase functions as a GalNAc transferase. Chondroitin polymerase is a two domain, bi-functional protein. The N-terminal domain functions as a GalNAc transferase. The bacterial chondroitin polymerase catalyzes elongation of the chondroitin chain by alternatively transferring the GlcUA and GalNAc moiety from UDP-GlcUA and UDP-GalNAc to the non-reducing ends of the chondroitin chain. The enzyme consists of N-terminal and C-terminal domains in which the two active sites catalyze the addition of GalNAc and GlcUA, respectively. Chondroitin chains range from 40 to over 100 repeating units of the disaccharide. Sulfated chondroitins are involved in the regulation of various biological functions such as central nervous system development, wound repair, infection, growth factor signaling, and morphogenesis, in addition to its conventional structural roles. In Caenorhabditis elegans, chondroitin is an essential factor for the worm
Probab=80.92 E-value=1.6 Score=37.36 Aligned_cols=26 Identities=31% Similarity=0.646 Sum_probs=21.3
Q ss_pred cceeeeeeEeeeeeeeccCCCCCCCC
Q 039651 83 CRYFGYLVSRKKYIISVDDDCLPAKD 108 (353)
Q Consensus 83 rkn~GyL~a~a~~I~~~DDDn~P~~~ 108 (353)
.+|.|+=.|..+||+.+|+|+.|..+
T Consensus 70 ~~n~g~~~a~g~~i~~lD~D~~~~~~ 95 (182)
T cd06420 70 IRNKAIAAAKGDYLIFIDGDCIPHPD 95 (182)
T ss_pred HHHHHHHHhcCCEEEEEcCCcccCHH
Confidence 35777777779999999999999753
No 22
>PRK10073 putative glycosyl transferase; Provisional
Probab=80.50 E-value=2.3 Score=41.81 Aligned_cols=84 Identities=17% Similarity=0.168 Sum_probs=49.9
Q ss_pred ceEEEEEecccChHHHHHHHhhcc-----cCceEEEEeCCCccccCCCCCCceEEeechhhhhhhcccc--chhh----c
Q 039651 10 EVDIVIAALQSDLTSFLNAWRPLF-----SRFHLIIVQDPDLKGELKIPQGFDHRVYTKSDIDQVIGPT--TSIV----F 78 (353)
Q Consensus 10 ~~~IVvttI~~~~~~fl~~~~~~~-----~~~~lvvV~D~d~~~~~ktP~g~~~~~~s~~~q~~~~~~~--~~~i----~ 78 (353)
.+.||||+. +.. ++|++.-+++ ..+.+|||-|+.+ .. |.+-.+++.... ...+ -
T Consensus 7 ~vSVIIP~y-N~~-~~L~~~l~Sl~~Qt~~~~EIIiVdDgSt------D~-------t~~i~~~~~~~~~~i~vi~~~n~ 71 (328)
T PRK10073 7 KLSIIIPLY-NAG-KDFRAFMESLIAQTWTALEIIIVNDGST------DN-------SVEIAKHYAENYPHVRLLHQANA 71 (328)
T ss_pred eEEEEEecc-CCH-HHHHHHHHHHHhCCCCCeEEEEEeCCCC------cc-------HHHHHHHHHhhCCCEEEEECCCC
Confidence 499999998 555 5666554443 4788999998532 11 111111111110 0111 0
Q ss_pred cccccceeeeeeEeeeeeeeccCCCCCCCC
Q 039651 79 SGYSCRYFGYLVSRKKYIISVDDDCLPAKD 108 (353)
Q Consensus 79 ~s~arkn~GyL~a~a~~I~~~DDDn~P~~~ 108 (353)
.-.+.||.|+-.|..+||.++|+|.....+
T Consensus 72 G~~~arN~gl~~a~g~yi~flD~DD~~~p~ 101 (328)
T PRK10073 72 GVSVARNTGLAVATGKYVAFPDADDVVYPT 101 (328)
T ss_pred ChHHHHHHHHHhCCCCEEEEECCCCccChh
Confidence 112346888888889999999999997764
No 23
>cd02511 Beta4Glucosyltransferase UDP-glucose LOS-beta-1,4 glucosyltransferase is required for biosynthesis of lipooligosaccharide. UDP-glucose: lipooligosaccharide (LOS) beta-1-4-glucosyltransferase catalyzes the addition of the first residue, glucose, of the lacto-N-neotetrase structure to HepI of the LOS inner core. LOS is the major constituent of the outer leaflet of the outer membrane of gram-positive bacteria. It consists of a short oligosaccharide chain of variable composition (alpha chain) attached to a branched inner core which is lined in turn to lipid A. Beta 1,4 glucosyltransferase is required to attach the alpha chain to the inner core.
Probab=79.13 E-value=1.8 Score=39.65 Aligned_cols=82 Identities=15% Similarity=0.201 Sum_probs=47.0
Q ss_pred eEEEEEecccChHHHHHHHhhcccCc--eEEEEeCCCccccCCCCCCceEEeechhhhhhhccc-cchhhccc-ccccee
Q 039651 11 VDIVIAALQSDLTSFLNAWRPLFSRF--HLIIVQDPDLKGELKIPQGFDHRVYTKSDIDQVIGP-TTSIVFSG-YSCRYF 86 (353)
Q Consensus 11 ~~IVvttI~~~~~~fl~~~~~~~~~~--~lvvV~D~d~~~~~ktP~g~~~~~~s~~~q~~~~~~-~~~~i~~s-~arkn~ 86 (353)
+.|||+|. ++. +.+++.-+++... ++|||-|+.+ .. |.+-.++ .+. ..+.-..+ -+.+|+
T Consensus 2 isvii~~~-Ne~-~~l~~~l~sl~~~~~eiivvD~gSt------D~-------t~~i~~~-~~~~v~~~~~~g~~~~~n~ 65 (229)
T cd02511 2 LSVVIITK-NEE-RNIERCLESVKWAVDEIIVVDSGST------DR-------TVEIAKE-YGAKVYQRWWDGFGAQRNF 65 (229)
T ss_pred EEEEEEeC-CcH-HHHHHHHHHHhcccCEEEEEeCCCC------cc-------HHHHHHH-cCCEEEECCCCChHHHHHH
Confidence 68999999 655 5566655554443 6777776322 11 1110010 110 00001112 245788
Q ss_pred eeeeEeeeeeeeccCCCCCCCC
Q 039651 87 GYLVSRKKYIISVDDDCLPAKD 108 (353)
Q Consensus 87 GyL~a~a~~I~~~DDDn~P~~~ 108 (353)
|.-.|..+||+.+|.|..+..+
T Consensus 66 ~~~~a~~d~vl~lDaD~~~~~~ 87 (229)
T cd02511 66 ALELATNDWVLSLDADERLTPE 87 (229)
T ss_pred HHHhCCCCEEEEEeCCcCcCHH
Confidence 8888889999999999998765
No 24
>PRK10063 putative glycosyl transferase; Provisional
Probab=78.57 E-value=1.1 Score=42.24 Aligned_cols=28 Identities=11% Similarity=0.275 Sum_probs=21.9
Q ss_pred cccceeeeeeEeeeeeeeccCCCCCCCC
Q 039651 81 YSCRYFGYLVSRKKYIISVDDDCLPAKD 108 (353)
Q Consensus 81 ~arkn~GyL~a~a~~I~~~DDDn~P~~~ 108 (353)
++.+|.|+-.|..+||..+|.|.....+
T Consensus 71 ~~A~N~Gi~~a~g~~v~~ld~DD~~~~~ 98 (248)
T PRK10063 71 YDAMNKGIAMAQGRFALFLNSGDIFHQD 98 (248)
T ss_pred HHHHHHHHHHcCCCEEEEEeCCcccCcC
Confidence 3457888888889999999977776653
No 25
>cd02510 pp-GalNAc-T pp-GalNAc-T initiates the formation of mucin-type O-linked glycans. UDP-GalNAc: polypeptide alpha-N-acetylgalactosaminyltransferases (pp-GalNAc-T) initiate the formation of mucin-type, O-linked glycans by catalyzing the transfer of alpha-N-acetylgalactosamine (GalNAc) from UDP-GalNAc to hydroxyl groups of Ser or Thr residues of core proteins to form the Tn antigen (GalNAc-a-1-O-Ser/Thr). These enzymes are type II membrane proteins with a GT-A type catalytic domain and a lectin domain located on the lumen side of the Golgi apparatus. In human, there are 15 isozymes of pp-GalNAc-Ts, representing the largest of all glycosyltransferase families. Each isozyme has unique but partially redundant substrate specificity for glycosylation sites on acceptor proteins.
Probab=78.52 E-value=0.54 Score=44.70 Aligned_cols=36 Identities=14% Similarity=0.149 Sum_probs=26.2
Q ss_pred cceeeeeeEeeeeeeeccCCCCCCCCCCCCcchhhh
Q 039651 83 CRYFGYLVSRKKYIISVDDDCLPAKDNDGNLTNAVS 118 (353)
Q Consensus 83 rkn~GyL~a~a~~I~~~DDDn~P~~~~~g~~~d~~~ 118 (353)
-+|.|.-.|..+||+.+|+|+.+..+|.-..++.+.
T Consensus 74 a~N~g~~~A~gd~i~fLD~D~~~~~~wL~~ll~~l~ 109 (299)
T cd02510 74 ARIAGARAATGDVLVFLDSHCEVNVGWLEPLLARIA 109 (299)
T ss_pred HHHHHHHHccCCEEEEEeCCcccCccHHHHHHHHHH
Confidence 467777777799999999999998766433333333
No 26
>cd04184 GT2_RfbC_Mx_like Myxococcus xanthus RfbC like proteins are required for O-antigen biosynthesis. The rfbC gene encodes a predicted protein of 1,276 amino acids, which is required for O-antigen biosynthesis in Myxococcus xanthus. It is a subfamily of Glycosyltransferase Family GT2, which includes diverse families of glycosyl transferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds.
Probab=76.80 E-value=1.1 Score=39.08 Aligned_cols=25 Identities=12% Similarity=0.094 Sum_probs=21.2
Q ss_pred ceeeeeeEeeeeeeeccCCCCCCCC
Q 039651 84 RYFGYLVSRKKYIISVDDDCLPAKD 108 (353)
Q Consensus 84 kn~GyL~a~a~~I~~~DDDn~P~~~ 108 (353)
+|.|+-.|..+||..+|+|+.+..+
T Consensus 75 ~n~g~~~a~~d~i~~ld~D~~~~~~ 99 (202)
T cd04184 75 TNSALELATGEFVALLDHDDELAPH 99 (202)
T ss_pred HHHHHHhhcCCEEEEECCCCcCChH
Confidence 5677777779999999999999875
No 27
>PRK14583 hmsR N-glycosyltransferase; Provisional
Probab=76.37 E-value=2.9 Score=42.62 Aligned_cols=83 Identities=16% Similarity=0.296 Sum_probs=46.1
Q ss_pred eEEEEEecccChHHHHHHHhhc-----ccCceEEEEeCCCccccCCCCCCceEEeechhhhhhhccccch--hhcccc--
Q 039651 11 VDIVIAALQSDLTSFLNAWRPL-----FSRFHLIIVQDPDLKGELKIPQGFDHRVYTKSDIDQVIGPTTS--IVFSGY-- 81 (353)
Q Consensus 11 ~~IVvttI~~~~~~fl~~~~~~-----~~~~~lvvV~D~d~~~~~ktP~g~~~~~~s~~~q~~~~~~~~~--~i~~s~-- 81 (353)
+.|+||+. ++. ..+++--++ ..++.+|||-|+.+ .+ +.+..+++....+. .+..+.
T Consensus 77 vsViIP~y-NE~-~~i~~~l~sll~q~yp~~eIivVdDgs~------D~-------t~~~~~~~~~~~~~v~vv~~~~n~ 141 (444)
T PRK14583 77 VSILVPCF-NEG-LNARETIHAALAQTYTNIEVIAINDGSS------DD-------TAQVLDALLAEDPRLRVIHLAHNQ 141 (444)
T ss_pred EEEEEEeC-CCH-HHHHHHHHHHHcCCCCCeEEEEEECCCC------cc-------HHHHHHHHHHhCCCEEEEEeCCCC
Confidence 99999999 665 334333222 23678999988422 11 11111111111111 111111
Q ss_pred ---ccceeeeeeEeeeeeeeccCCCCCCCC
Q 039651 82 ---SCRYFGYLVSRKKYIISVDDDCLPAKD 108 (353)
Q Consensus 82 ---arkn~GyL~a~a~~I~~~DDDn~P~~~ 108 (353)
.-.|.|...|..|||+.+|.|+.|..+
T Consensus 142 Gka~AlN~gl~~a~~d~iv~lDAD~~~~~d 171 (444)
T PRK14583 142 GKAIALRMGAAAARSEYLVCIDGDALLDKN 171 (444)
T ss_pred CHHHHHHHHHHhCCCCEEEEECCCCCcCHH
Confidence 112567666779999999999999774
No 28
>cd04188 DPG_synthase DPG_synthase is involved in protein N-linked glycosylation. UDP-glucose:dolichyl-phosphate glucosyltransferase (DPG_synthase) is a transmembrane-bound enzyme of the endoplasmic reticulum involved in protein N-linked glycosylation. This enzyme catalyzes the transfer of glucose from UDP-glucose to dolichyl phosphate.
Probab=76.23 E-value=2.1 Score=38.08 Aligned_cols=82 Identities=18% Similarity=0.224 Sum_probs=46.0
Q ss_pred EEEEecccCh---HHHHHHHhhcc-----cCceEEEEeCCCccccCCCCCCceEEeechhhhhhhccccc---hhh----
Q 039651 13 IVIAALQSDL---TSFLNAWRPLF-----SRFHLIIVQDPDLKGELKIPQGFDHRVYTKSDIDQVIGPTT---SIV---- 77 (353)
Q Consensus 13 IVvttI~~~~---~~fl~~~~~~~-----~~~~lvvV~D~d~~~~~ktP~g~~~~~~s~~~q~~~~~~~~---~~i---- 77 (353)
||||+. ++. .+++++..... ..+.+|||-|+.+ .. +.+..+++..... ..+
T Consensus 1 iiip~y-N~~~~l~~~l~~l~~~~~~~~~~~~eiivvdd~S~------D~-------t~~~~~~~~~~~~~~i~~i~~~~ 66 (211)
T cd04188 1 VVIPAY-NEEKRLPPTLEEAVEYLEERPSFSYEIIVVDDGSK------DG-------TAEVARKLARKNPALIRVLTLPK 66 (211)
T ss_pred CEEccc-ChHHHHHHHHHHHHHHHhccCCCCEEEEEEeCCCC------Cc-------hHHHHHHHHHhCCCcEEEEEccc
Confidence 689998 433 35667766543 3678999987421 11 1111121111111 111
Q ss_pred -ccccccceeeeeeEeeeeeeeccCCCCCCCC
Q 039651 78 -FSGYSCRYFGYLVSRKKYIISVDDDCLPAKD 108 (353)
Q Consensus 78 -~~s~arkn~GyL~a~a~~I~~~DDDn~P~~~ 108 (353)
....+..|.|+-+|..+||+.+|.|..+..+
T Consensus 67 n~G~~~a~~~g~~~a~gd~i~~ld~D~~~~~~ 98 (211)
T cd04188 67 NRGKGGAVRAGMLAARGDYILFADADLATPFE 98 (211)
T ss_pred CCCcHHHHHHHHHHhcCCEEEEEeCCCCCCHH
Confidence 1122334567777779999999999887764
No 29
>COG0463 WcaA Glycosyltransferases involved in cell wall biogenesis [Cell envelope biogenesis, outer membrane]
Probab=76.09 E-value=4 Score=32.65 Aligned_cols=84 Identities=20% Similarity=0.219 Sum_probs=47.3
Q ss_pred CceEEEEEecccChHHHHHHHhhcc-----cCceEEEEeCCCccccCCCCCCceEEeechhhhhhhccc---cchh---h
Q 039651 9 SEVDIVIAALQSDLTSFLNAWRPLF-----SRFHLIIVQDPDLKGELKIPQGFDHRVYTKSDIDQVIGP---TTSI---V 77 (353)
Q Consensus 9 ~~~~IVvttI~~~~~~fl~~~~~~~-----~~~~lvvV~D~d~~~~~ktP~g~~~~~~s~~~q~~~~~~---~~~~---i 77 (353)
-.+.|||||. +.. ..+.+--+.+ ..+.+|||-|+.+ ++ +.+..++.... .... -
T Consensus 3 ~~~siiip~~-n~~-~~l~~~l~s~~~q~~~~~eiivvddgs~-------d~------t~~~~~~~~~~~~~~~~~~~~~ 67 (291)
T COG0463 3 PKVSVVIPTY-NEE-EYLPEALESLLNQTYKDFEIIVVDDGST-------DG------TTEIAIEYGAKDVRVIRLINER 67 (291)
T ss_pred ccEEEEEecc-chh-hhHHHHHHHHHhhhhcceEEEEEeCCCC-------CC------hHHHHHHHhhhcceEEEeeccc
Confidence 4688999999 655 4444443333 2367888887433 11 11222221111 0000 1
Q ss_pred -ccccccceeeeeeEeeeeeeeccCCCCCCCC
Q 039651 78 -FSGYSCRYFGYLVSRKKYIISVDDDCLPAKD 108 (353)
Q Consensus 78 -~~s~arkn~GyL~a~a~~I~~~DDDn~P~~~ 108 (353)
..-...+|.|+.++..+||..+|.|.. +.+
T Consensus 68 ~~g~~~~~~~~~~~~~~~~~~~~d~d~~-~~~ 98 (291)
T COG0463 68 NGGLGAARNAGLEYARGDYIVFLDADDQ-HPP 98 (291)
T ss_pred CCChHHHHHhhHHhccCCEEEEEccCCC-CCH
Confidence 223344566667776899999999999 776
No 30
>cd04186 GT_2_like_c Subfamily of Glycosyltransferase Family GT2 of unknown function. GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.
Probab=76.00 E-value=1.2 Score=36.79 Aligned_cols=26 Identities=12% Similarity=0.231 Sum_probs=20.0
Q ss_pred cceeeeeeEeeeeeeeccCCCCCCCC
Q 039651 83 CRYFGYLVSRKKYIISVDDDCLPAKD 108 (353)
Q Consensus 83 rkn~GyL~a~a~~I~~~DDDn~P~~~ 108 (353)
-+|.|+-.+..+||+.+|||+.+..+
T Consensus 65 a~n~~~~~~~~~~i~~~D~D~~~~~~ 90 (166)
T cd04186 65 GNNQGIREAKGDYVLLLNPDTVVEPG 90 (166)
T ss_pred HhhHHHhhCCCCEEEEECCCcEECcc
Confidence 34555555669999999999998764
No 31
>TIGR03469 HonB hopene-associated glycosyltransferase HpnB. This family of genes include a glycosyl transferase, group 2 domain (pfam00535) which are responsible, generally for the transfer of nucleotide-diphosphate sugars to substrates such as polysaccharides and lipids. The genes of this family are often found in the same genetic locus with squalene-hopene cyclase genes, and are never associated with genes for the metabolism of phytoene. Indeed, the members of this family appear to never be found in a genome lacking squalene-hopene cyclase (SHC), although not all genomes encoding SHC have this glycosyl transferase. In the organism Zymomonas mobilis the linkage of this gene to hopanoid biosynthesis has been noted and the gene named HpnB. Hopanoids are known to feature polar glycosyl head groups in many organisms.
Probab=74.85 E-value=2.6 Score=42.15 Aligned_cols=25 Identities=28% Similarity=0.423 Sum_probs=20.1
Q ss_pred eeeeeeEe-----eeeeeeccCCCCCCCCC
Q 039651 85 YFGYLVSR-----KKYIISVDDDCLPAKDN 109 (353)
Q Consensus 85 n~GyL~a~-----a~~I~~~DDDn~P~~~~ 109 (353)
|-|+-.|. .|||+.+|+|+.+..++
T Consensus 121 n~g~~~A~~~~~~gd~llflDaD~~~~p~~ 150 (384)
T TIGR03469 121 SQGIAAARTLAPPADYLLLTDADIAHGPDN 150 (384)
T ss_pred HHHHHHHhccCCCCCEEEEECCCCCCChhH
Confidence 45666666 79999999999998763
No 32
>cd02522 GT_2_like_a GT_2_like_a represents a glycosyltransferase family-2 subfamily with unknown function. Glycosyltransferase family 2 (GT-2) subfamily of unknown function. GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.
Probab=74.68 E-value=3.2 Score=36.64 Aligned_cols=26 Identities=15% Similarity=0.176 Sum_probs=21.4
Q ss_pred cceeeeeeEeeeeeeeccCCCCCCCC
Q 039651 83 CRYFGYLVSRKKYIISVDDDCLPAKD 108 (353)
Q Consensus 83 rkn~GyL~a~a~~I~~~DDDn~P~~~ 108 (353)
.+|.|.-.|..+||+.+|+|+.+..+
T Consensus 63 a~n~g~~~a~~~~i~~~D~D~~~~~~ 88 (221)
T cd02522 63 QMNAGAAAARGDWLLFLHADTRLPPD 88 (221)
T ss_pred HHHHHHHhccCCEEEEEcCCCCCChh
Confidence 34777777779999999999999764
No 33
>PRK11204 N-glycosyltransferase; Provisional
Probab=73.63 E-value=3.9 Score=40.79 Aligned_cols=84 Identities=14% Similarity=0.277 Sum_probs=45.9
Q ss_pred ceEEEEEecccChHHHHHHHhhcc-----cCceEEEEeCCCccccCCCCCCceEEeechhhhhhhccccch--hhc-cc-
Q 039651 10 EVDIVIAALQSDLTSFLNAWRPLF-----SRFHLIIVQDPDLKGELKIPQGFDHRVYTKSDIDQVIGPTTS--IVF-SG- 80 (353)
Q Consensus 10 ~~~IVvttI~~~~~~fl~~~~~~~-----~~~~lvvV~D~d~~~~~ktP~g~~~~~~s~~~q~~~~~~~~~--~i~-~s- 80 (353)
.+.||||+. ++. +.+++.-+++ ..+.+|||-|+.+ ++. .+..+++...... .+. +.
T Consensus 55 ~vsViIp~y-ne~-~~i~~~l~sl~~q~yp~~eiiVvdD~s~------d~t-------~~~l~~~~~~~~~v~~i~~~~n 119 (420)
T PRK11204 55 GVSILVPCY-NEG-ENVEETISHLLALRYPNYEVIAINDGSS------DNT-------GEILDRLAAQIPRLRVIHLAEN 119 (420)
T ss_pred CEEEEEecC-CCH-HHHHHHHHHHHhCCCCCeEEEEEECCCC------ccH-------HHHHHHHHHhCCcEEEEEcCCC
Confidence 389999998 665 4454433332 3578999988422 221 1111111111111 111 10
Q ss_pred ---cccceeeeeeEeeeeeeeccCCCCCCCC
Q 039651 81 ---YSCRYFGYLVSRKKYIISVDDDCLPAKD 108 (353)
Q Consensus 81 ---~arkn~GyL~a~a~~I~~~DDDn~P~~~ 108 (353)
-...|.|+-.|..|||+.+|+|+.|..+
T Consensus 120 ~Gka~aln~g~~~a~~d~i~~lDaD~~~~~d 150 (420)
T PRK11204 120 QGKANALNTGAAAARSEYLVCIDGDALLDPD 150 (420)
T ss_pred CCHHHHHHHHHHHcCCCEEEEECCCCCCChh
Confidence 0112456555668999999999999775
No 34
>cd04179 DPM_DPG-synthase_like DPM_DPG-synthase_like is a member of the Glycosyltransferase 2 superfamily. DPM1 is the catalytic subunit of eukaryotic dolichol-phosphate mannose (DPM) synthase. DPM synthase is required for synthesis of the glycosylphosphatidylinositol (GPI) anchor, N-glycan precursor, protein O-mannose, and C-mannose. In higher eukaryotes,the enzyme has three subunits, DPM1, DPM2 and DPM3. DPM is synthesized from dolichol phosphate and GDP-Man on the cytosolic surface of the ER membrane by DPM synthase and then is flipped onto the luminal side and used as a donor substrate. In lower eukaryotes, such as Saccharomyces cerevisiae and Trypanosoma brucei, DPM synthase consists of a single component (Dpm1p and TbDpm1, respectively) that possesses one predicted transmembrane region near the C terminus for anchoring to the ER membrane. In contrast, the Dpm1 homologues of higher eukaryotes, namely fission yeast, fungi, and animals, have no transmembrane region, suggesting the ex
Probab=73.42 E-value=2.3 Score=36.35 Aligned_cols=27 Identities=15% Similarity=0.326 Sum_probs=21.2
Q ss_pred ccceeeeeeEeeeeeeeccCCCCCCCC
Q 039651 82 SCRYFGYLVSRKKYIISVDDDCLPAKD 108 (353)
Q Consensus 82 arkn~GyL~a~a~~I~~~DDDn~P~~~ 108 (353)
+.+|.|...|..+||+.+|+|+.+..+
T Consensus 69 ~a~n~g~~~a~gd~i~~lD~D~~~~~~ 95 (185)
T cd04179 69 AAVRAGFKAARGDIVVTMDADLQHPPE 95 (185)
T ss_pred HHHHHHHHHhcCCEEEEEeCCCCCCHH
Confidence 445667777779999999999988654
No 35
>cd06435 CESA_NdvC_like NdvC_like proteins in this family are putative bacterial beta-(1,6)-glucosyltransferase. NdvC_like proteins in this family are putative bacterial beta-(1,6)-glucosyltransferase. Bradyrhizobium japonicum synthesizes periplasmic cyclic beta-(1,3),beta-(1,6)-D-glucans during growth under hypoosmotic conditions. Two genes (ndvB, ndvC) are involved in the beta-(1, 3), beta-(1,6)-glucan synthesis. The ndvC mutant strain resulted in synthesis of altered cyclic beta-glucans composed almost entirely of beta-(1, 3)-glycosyl linkages. The periplasmic cyclic beta-(1,3),beta-(1,6)-D-glucans function for osmoregulation. The ndvC mutation also affects the ability of the bacteria to establish a successful symbiotic interaction with host plant. Thus, the beta-glucans may function as suppressors of a host defense response.
Probab=73.00 E-value=2.5 Score=37.94 Aligned_cols=26 Identities=15% Similarity=0.172 Sum_probs=20.7
Q ss_pred cceeeeeeEe--eeeeeeccCCCCCCCC
Q 039651 83 CRYFGYLVSR--KKYIISVDDDCLPAKD 108 (353)
Q Consensus 83 rkn~GyL~a~--a~~I~~~DDDn~P~~~ 108 (353)
..|.|+-.+. .+||+.+|+|+.+..+
T Consensus 73 a~n~g~~~a~~~~d~i~~lD~D~~~~~~ 100 (236)
T cd06435 73 ALNYALERTAPDAEIIAVIDADYQVEPD 100 (236)
T ss_pred HHHHHHHhcCCCCCEEEEEcCCCCcCHH
Confidence 3567766665 6899999999998775
No 36
>cd06439 CESA_like_1 CESA_like_1 is a member of the cellulose synthase (CESA) superfamily. This is a subfamily of cellulose synthase (CESA) superfamily. CESA superfamily includes a wide variety of glycosyltransferase family 2 enzymes that share the common characteristic of catalyzing the elongation of polysaccharide chains. The members of the superfamily include cellulose synthase catalytic subunit, chitin synthase, glucan biosynthesis protein and other families of CESA-like proteins.
Probab=72.25 E-value=4.5 Score=36.65 Aligned_cols=25 Identities=12% Similarity=0.143 Sum_probs=19.6
Q ss_pred ceeeeeeEeeeeeeeccCCCCCCCC
Q 039651 84 RYFGYLVSRKKYIISVDDDCLPAKD 108 (353)
Q Consensus 84 kn~GyL~a~a~~I~~~DDDn~P~~~ 108 (353)
+|.|+-.|..+||+.+|+|+.+..+
T Consensus 101 ~n~gi~~a~~d~i~~lD~D~~~~~~ 125 (251)
T cd06439 101 LNRALALATGEIVVFTDANALLDPD 125 (251)
T ss_pred HHHHHHHcCCCEEEEEccccCcCHH
Confidence 3556666668999999999999754
No 37
>cd06913 beta3GnTL1_like Beta 1, 3-N-acetylglucosaminyltransferase is essential for the formation of poly-N-acetyllactosamine . This family includes human Beta3GnTL1 and related eukaryotic proteins. Human Beta3GnTL1 is a putative beta-1,3-N-acetylglucosaminyltransferase. Beta3GnTL1 is expressed at various levels in most of tissues examined. Beta 1, 3-N-acetylglucosaminyltransferase has been found to be essential for the formation of poly-N-acetyllactosamine. Poly-N-acetyllactosamine is a unique carbohydrate composed of N-acetyllactosamine repeats. It is often an important part of cell-type-specific oligosaccharide structures and some functional oligosaccharides. It has been shown that the structure and biosynthesis of poly-N-acetyllactosamine display a dramatic change during development and oncogenesis. Several members of beta-1, 3-N-acetylglucosaminyltransferase have been identified.
Probab=69.82 E-value=2.9 Score=37.34 Aligned_cols=26 Identities=15% Similarity=0.183 Sum_probs=21.3
Q ss_pred cceeeeeeEeeeeeeeccCCCCCCCC
Q 039651 83 CRYFGYLVSRKKYIISVDDDCLPAKD 108 (353)
Q Consensus 83 rkn~GyL~a~a~~I~~~DDDn~P~~~ 108 (353)
.+|.|.-.|..+||..+|+|..+..+
T Consensus 75 a~N~g~~~a~gd~i~~lD~D~~~~~~ 100 (219)
T cd06913 75 AKNQAIAQSSGRYLCFLDSDDVMMPQ 100 (219)
T ss_pred HHHHHHHhcCCCEEEEECCCccCChh
Confidence 35777777779999999999997765
No 38
>PF10111 Glyco_tranf_2_2: Glycosyltransferase like family 2; InterPro: IPR019290 This conserved domain is found in a set of prokaryotic proteins including putative glucosyltransferases, which are involved in bacterial capsule biosynthesis [, ].
Probab=67.15 E-value=2.2 Score=40.80 Aligned_cols=38 Identities=32% Similarity=0.605 Sum_probs=30.6
Q ss_pred ccccccceeeeeeEeeeeeeeccCCCCCCCCCCCCcchhhhhhhh
Q 039651 78 FSGYSCRYFGYLVSRKKYIISVDDDCLPAKDNDGNLTNAVSQHLA 122 (353)
Q Consensus 78 ~~s~arkn~GyL~a~a~~I~~~DDDn~P~~~~~g~~~d~~~~h~~ 122 (353)
|.--..||+|.-+|.++||+.+|.|+.|.. +++++.+.
T Consensus 74 f~~a~arN~g~~~A~~d~l~flD~D~i~~~-------~~i~~~~~ 111 (281)
T PF10111_consen 74 FSRAKARNIGAKYARGDYLIFLDADCIPSP-------DFIEKLLN 111 (281)
T ss_pred cCHHHHHHHHHHHcCCCEEEEEcCCeeeCH-------HHHHHHHH
Confidence 344567999999999999999999999987 45555554
No 39
>cd04185 GT_2_like_b Subfamily of Glycosyltransferase Family GT2 of unknown function. GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.
Probab=66.65 E-value=8.2 Score=33.73 Aligned_cols=16 Identities=38% Similarity=0.688 Sum_probs=14.3
Q ss_pred eeeeeeccCCCCCCCC
Q 039651 93 KKYIISVDDDCLPAKD 108 (353)
Q Consensus 93 a~~I~~~DDDn~P~~~ 108 (353)
.+|++.+|+|+.+..+
T Consensus 80 ~d~v~~ld~D~~~~~~ 95 (202)
T cd04185 80 YDWIWLMDDDAIPDPD 95 (202)
T ss_pred CCEEEEeCCCCCcChH
Confidence 7899999999999864
No 40
>PF04583 Baculo_p74: Baculoviridae p74 conserved region; InterPro: IPR007663 Baculoviruses are distinct from other virus families in that there are two viral phenotypes: budded virus (BV) and occlusion-derived virus (ODV). BVs disseminate viral infection throughout the tissues of the host and ODVs transmit baculovirus between insect hosts. GFP tagging experiments implicate p74 as an ODV envelope protein [, ].; GO: 0019058 viral infectious cycle
Probab=65.93 E-value=2.7 Score=40.80 Aligned_cols=21 Identities=33% Similarity=0.518 Sum_probs=17.7
Q ss_pred ccccCCCCCCCcccCcCCCcc
Q 039651 135 TLYDPFREGADFVRGYPFSLR 155 (353)
Q Consensus 135 ~ly~p~~~~~~~pRGyP~s~r 155 (353)
.+++||+...+||||||=.+.
T Consensus 122 ~~WDPfGYnNMFPr~~ldDLs 142 (249)
T PF04583_consen 122 MFWDPFGYNNMFPREYLDDLS 142 (249)
T ss_pred HhcCcccccccCCCcchHHHH
Confidence 468999999999999995543
No 41
>cd02526 GT2_RfbF_like RfbF is a putative dTDP-rhamnosyl transferase. Shigella flexneri RfbF protein is a putative dTDP-rhamnosyl transferase. dTDP rhamnosyl transferases of Shigella flexneri add rhamnose sugars to N-acetyl-glucosamine in the O-antigen tetrasaccharide repeat. Lipopolysaccharide O antigens are important virulence determinants for many bacteria. The variations of sugar composition, the sequence of the sugars and the linkages in the O antigen provide structural diversity of the O antigen.
Probab=63.72 E-value=3.4 Score=36.97 Aligned_cols=25 Identities=24% Similarity=0.505 Sum_probs=18.2
Q ss_pred ceeeeeeEee---eeeeeccCCCCCCCC
Q 039651 84 RYFGYLVSRK---KYIISVDDDCLPAKD 108 (353)
Q Consensus 84 kn~GyL~a~a---~~I~~~DDDn~P~~~ 108 (353)
+|.|+-.|.. +||+.+|+|+.+..+
T Consensus 64 ~N~g~~~a~~~~~d~v~~lD~D~~~~~~ 91 (237)
T cd02526 64 LNIGIKAALENGADYVLLFDQDSVPPPD 91 (237)
T ss_pred hhHHHHHHHhCCCCEEEEECCCCCcCHh
Confidence 4445444443 999999999999764
No 42
>cd04187 DPM1_like_bac Bacterial DPM1_like enzymes are related to eukaryotic DPM1. A family of bacterial enzymes related to eukaryotic DPM1; Although the mechanism of eukaryotic enzyme is well studied, the mechanism of the bacterial enzymes is not well understood. The eukaryotic DPM1 is the catalytic subunit of eukaryotic Dolichol-phosphate mannose (DPM) synthase. DPM synthase is required for synthesis of the glycosylphosphatidylinositol (GPI) anchor, N-glycan precursor, protein O-mannose, and C-mannose. The enzyme has three subunits, DPM1, DPM2 and DPM3. DPM is synthesized from dolichol phosphate and GDP-Man on the cytosolic surface of the ER membrane by DPM synthase and then is flipped onto the luminal side and used as a donor substrate. This protein family belongs to Glycosyltransferase 2 superfamily.
Probab=61.92 E-value=7.9 Score=33.31 Aligned_cols=24 Identities=21% Similarity=0.268 Sum_probs=18.6
Q ss_pred eeeeeeEeeeeeeeccCCCCCCCC
Q 039651 85 YFGYLVSRKKYIISVDDDCLPAKD 108 (353)
Q Consensus 85 n~GyL~a~a~~I~~~DDDn~P~~~ 108 (353)
|.|...|..+||+.+|+|+.+..+
T Consensus 73 n~g~~~a~~d~i~~~D~D~~~~~~ 96 (181)
T cd04187 73 LAGLDHARGDAVITMDADLQDPPE 96 (181)
T ss_pred HHHHHhcCCCEEEEEeCCCCCCHH
Confidence 345566669999999999997654
No 43
>cd06438 EpsO_like EpsO protein participates in the methanolan synthesis. The Methylobacillus sp EpsO protein is predicted to participate in the methanolan synthesis. Methanolan is an exopolysaccharide (EPS), composed of glucose, mannose and galactose. A 21 genes cluster was predicted to participate in the methanolan synthesis. Gene disruption analysis revealed that EpsO is one of the glycosyltransferase enzymes involved in the synthesis of repeating sugar units onto the lipid carrier.
Probab=61.38 E-value=1.7 Score=37.93 Aligned_cols=24 Identities=21% Similarity=0.296 Sum_probs=18.6
Q ss_pred eeeeeeEe-----eeeeeeccCCCCCCCC
Q 039651 85 YFGYLVSR-----KKYIISVDDDCLPAKD 108 (353)
Q Consensus 85 n~GyL~a~-----a~~I~~~DDDn~P~~~ 108 (353)
|.|+-++. .+||+.+|.|+.+..+
T Consensus 69 n~g~~~a~~~~~~~d~v~~~DaD~~~~p~ 97 (183)
T cd06438 69 DFGFRHLLNLADDPDAVVVFDADNLVDPN 97 (183)
T ss_pred HHHHHHHHhcCCCCCEEEEEcCCCCCChh
Confidence 45665553 8999999999999864
No 44
>PRK10714 undecaprenyl phosphate 4-deoxy-4-formamido-L-arabinose transferase; Provisional
Probab=61.28 E-value=13 Score=36.54 Aligned_cols=88 Identities=11% Similarity=0.225 Sum_probs=48.9
Q ss_pred CCCceEEEEEecccCh---HHHHHHHhhcc----cCceEEEEeCCCccccCCCCCCceEEeechhhhhhhc---cccchh
Q 039651 7 DDSEVDIVIAALQSDL---TSFLNAWRPLF----SRFHLIIVQDPDLKGELKIPQGFDHRVYTKSDIDQVI---GPTTSI 76 (353)
Q Consensus 7 ~~~~~~IVvttI~~~~---~~fl~~~~~~~----~~~~lvvV~D~d~~~~~ktP~g~~~~~~s~~~q~~~~---~~~~~~ 76 (353)
...++.||||+. ++- .+++++..+.+ ..+.+|||=|+.+ ++ |.+-.+++. +.....
T Consensus 4 ~~~~vSVVIP~y-NE~~~i~~~l~~l~~~~~~~~~~~EIIvVDDgS~-------D~------T~~il~~~~~~~~~~v~~ 69 (325)
T PRK10714 4 PIKKVSVVIPVY-NEQESLPELIRRTTAACESLGKEYEILLIDDGSS-------DN------SAEMLVEAAQAPDSHIVA 69 (325)
T ss_pred CCCeEEEEEccc-CchhhHHHHHHHHHHHHHhCCCCEEEEEEeCCCC-------Cc------HHHHHHHHHhhcCCcEEE
Confidence 345699999999 543 25666665433 3578999988422 21 111111111 110000
Q ss_pred h-----ccccccceeeeeeEeeeeeeeccCCCCCCCC
Q 039651 77 V-----FSGYSCRYFGYLVSRKKYIISVDDDCLPAKD 108 (353)
Q Consensus 77 i-----~~s~arkn~GyL~a~a~~I~~~DDDn~P~~~ 108 (353)
+ +...+..+.|+-.|..+||+.+|.|.....+
T Consensus 70 i~~~~n~G~~~A~~~G~~~A~gd~vv~~DaD~q~~p~ 106 (325)
T PRK10714 70 ILLNRNYGQHSAIMAGFSHVTGDLIITLDADLQNPPE 106 (325)
T ss_pred EEeCCCCCHHHHHHHHHHhCCCCEEEEECCCCCCCHH
Confidence 1 1222234456667779999999999986553
No 45
>cd04190 Chitin_synth_C C-terminal domain of Chitin Synthase catalyzes the incorporation of GlcNAc from substrate UDP-GlcNAc into chitin. Chitin synthase, also called UDP-N-acetyl-D-glucosamine:chitin 4-beta-N-acetylglucosaminyltransferase, catalyzes the incorporation of GlcNAc from substrate UDP-GlcNAc into chitin, which is a linear homopolymer of GlcNAc residues formed by covalent beta-1,4 linkages. Chitin is an important component of the cell wall of fungi and bacteria and it is synthesized on the cytoplasmic surface of the cell membrane by membrane bound chitin synthases. Studies with fungi have revealed that most of them contain more than one chitin synthase gene. At least five subclasses of chitin synthases have been identified.
Probab=60.28 E-value=6.6 Score=36.35 Aligned_cols=24 Identities=21% Similarity=0.192 Sum_probs=20.1
Q ss_pred eeeeeeEeeeeeeeccCCCCCCCC
Q 039651 85 YFGYLVSRKKYIISVDDDCLPAKD 108 (353)
Q Consensus 85 n~GyL~a~a~~I~~~DDDn~P~~~ 108 (353)
|-|+..|..|||+.+|.|+.+..+
T Consensus 66 ~~~~~~a~~e~i~~~DaD~~~~~~ 89 (244)
T cd04190 66 CRVLFPDDPEFILLVDADTKFDPD 89 (244)
T ss_pred HHHhhcCCCCEEEEECCCCcCCHh
Confidence 446667789999999999999875
No 46
>PTZ00260 dolichyl-phosphate beta-glucosyltransferase; Provisional
Probab=60.26 E-value=8.5 Score=38.08 Aligned_cols=25 Identities=44% Similarity=0.555 Sum_probs=19.9
Q ss_pred ceeeeeeEeeeeeeeccCCCCCCCC
Q 039651 84 RYFGYLVSRKKYIISVDDDCLPAKD 108 (353)
Q Consensus 84 kn~GyL~a~a~~I~~~DDDn~P~~~ 108 (353)
.|.|+..|..+||+.+|.|+....+
T Consensus 154 ~~~Gi~~a~gd~I~~~DaD~~~~~~ 178 (333)
T PTZ00260 154 VRIGMLASRGKYILMVDADGATDID 178 (333)
T ss_pred HHHHHHHccCCEEEEEeCCCCCCHH
Confidence 4567777779999999999986654
No 47
>TIGR03111 glyc2_xrt_Gpos1 putative glycosyltransferase TIGR03111. Members of this protein family probable glycosyltransferases of family 2, whose genes are near those for Gram-positive proteins (TIGR03110) related to the proposed exosortase (TIGR02602).
Probab=57.20 E-value=13 Score=38.06 Aligned_cols=24 Identities=38% Similarity=0.350 Sum_probs=19.3
Q ss_pred eeeeeeEeeeeeeeccCCCCCCCC
Q 039651 85 YFGYLVSRKKYIISVDDDCLPAKD 108 (353)
Q Consensus 85 n~GyL~a~a~~I~~~DDDn~P~~~ 108 (353)
|.|+-.|..+||+.+|.|+.|..+
T Consensus 124 N~gl~~s~g~~v~~~DaD~~~~~d 147 (439)
T TIGR03111 124 NAAIYNSIGKYIIHIDSDGKLHKD 147 (439)
T ss_pred HHHHHHccCCEEEEECCCCCcChH
Confidence 456666669999999999999653
No 48
>PRK11498 bcsA cellulose synthase catalytic subunit; Provisional
Probab=57.16 E-value=5.6 Score=44.77 Aligned_cols=82 Identities=10% Similarity=0.165 Sum_probs=45.6
Q ss_pred ceEEEEEecccChHHHHHHHhhc-c------cCceEEEEeCCCccccCCCCCC------ceEEeechhhhhhhccccchh
Q 039651 10 EVDIVIAALQSDLTSFLNAWRPL-F------SRFHLIIVQDPDLKGELKIPQG------FDHRVYTKSDIDQVIGPTTSI 76 (353)
Q Consensus 10 ~~~IVvttI~~~~~~fl~~~~~~-~------~~~~lvvV~D~d~~~~~ktP~g------~~~~~~s~~~q~~~~~~~~~~ 76 (353)
.++|+|||. +++.+.+++-... + .+++++||-|+.+ ++- ..+++++..+.. +.++.
T Consensus 261 ~VsViIPtY-NE~~~vv~~tI~a~l~~dYP~~k~EViVVDDgS~------D~t~~la~~~~v~yI~R~~n~---~gKAG- 329 (852)
T PRK11498 261 TVDIFVPTY-NEDLNVVKNTIYASLGIDWPKDKLNIWILDDGGR------EEFRQFAQEVGVKYIARPTHE---HAKAG- 329 (852)
T ss_pred cEEEEEecC-CCcHHHHHHHHHHHHhccCCCCceEEEEEeCCCC------hHHHHHHHHCCcEEEEeCCCC---cchHH-
Confidence 399999999 7664555432222 1 2578999988532 220 011111111000 00111
Q ss_pred hccccccceeeeeeEeeeeeeeccCCCCCCCC
Q 039651 77 VFSGYSCRYFGYLVSRKKYIISVDDDCLPAKD 108 (353)
Q Consensus 77 i~~s~arkn~GyL~a~a~~I~~~DDDn~P~~~ 108 (353)
-.|.|.=.+..|||..+|.|+.|..+
T Consensus 330 ------nLN~aL~~a~GEyIavlDAD~ip~pd 355 (852)
T PRK11498 330 ------NINNALKYAKGEFVAIFDCDHVPTRS 355 (852)
T ss_pred ------HHHHHHHhCCCCEEEEECCCCCCChH
Confidence 12555656668999999999999875
No 49
>TIGR03030 CelA cellulose synthase catalytic subunit (UDP-forming). Cellulose synthase catalyzes the beta-1,4 polymerization of glucose residues in the formation of cellulose. In bacteria, the substrate is UDP-glucose. The synthase consists of two subunits (or domains in the frequent cases where it is encoded as a single polypeptide), the catalytic domain modelled here and the regulatory domain (pfam03170). The regulatory domain binds the allosteric activator cyclic di-GMP. The protein is membrane-associated and probably assembles into multimers such that the individual cellulose strands can self-assemble into multi-strand fibrils.
Probab=56.36 E-value=8.9 Score=42.00 Aligned_cols=97 Identities=12% Similarity=0.170 Sum_probs=50.7
Q ss_pred ceEEEEEecccChHHHHHHHhhcc-------cCceEEEEeCCCccccCCCCCCceEEee-chhhhhhhcccc-chhh---
Q 039651 10 EVDIVIAALQSDLTSFLNAWRPLF-------SRFHLIIVQDPDLKGELKIPQGFDHRVY-TKSDIDQVIGPT-TSIV--- 77 (353)
Q Consensus 10 ~~~IVvttI~~~~~~fl~~~~~~~-------~~~~lvvV~D~d~~~~~ktP~g~~~~~~-s~~~q~~~~~~~-~~~i--- 77 (353)
.++||||+. ++..+.+++--..+ .+++++||-|+.+-...++|+.+..+.- ..++.+++.... ...+
T Consensus 132 ~VsViIP~y-NE~~~iv~~tl~s~~~~dYP~~~~eIiVvDDgStD~t~~~~~~~~~~~~~~~~~~~~l~~~~~v~yi~r~ 210 (713)
T TIGR03030 132 TVDVFIPTY-NEDLEIVATTVLAAKNMDYPADKFRVWILDDGGTDQKRNDPDPEQAEAAQRREELKEFCRKLGVNYITRP 210 (713)
T ss_pred eeEEEEcCC-CCCHHHHHHHHHHHHhCCCCccceEEEEEECcCCccccccchhhhhhhhhhHHHHHHHHHHcCcEEEECC
Confidence 399999999 66535555322221 1578999998644333344543332110 011111111111 1111
Q ss_pred ----ccccccceeeeeeEeeeeeeeccCCCCCCCC
Q 039651 78 ----FSGYSCRYFGYLVSRKKYIISVDDDCLPAKD 108 (353)
Q Consensus 78 ----~~s~arkn~GyL~a~a~~I~~~DDDn~P~~~ 108 (353)
.|..+ .|-|+=.+..+||..+|.|+.|..+
T Consensus 211 ~n~~~KAgn-LN~al~~a~gd~Il~lDAD~v~~pd 244 (713)
T TIGR03030 211 RNVHAKAGN-INNALKHTDGELILIFDADHVPTRD 244 (713)
T ss_pred CCCCCChHH-HHHHHHhcCCCEEEEECCCCCcChh
Confidence 11111 2456555669999999999999864
No 50
>PF01762 Galactosyl_T: Galactosyltransferase; InterPro: IPR002659 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 31 (GH31 from CAZY) comprises enzymes with a number of known activities; N-acetyllactosaminide beta-1,3-N-acetylglucosaminyltransferase (2.4.1.149 from EC); beta-1,3-galactosyltransferase (2.4.1 from EC); fucose-specific beta-1,3-N-acetylglucosaminyltransferase (2.4.1 from EC); globotriosylceramide beta-1,3-GalNAc transferase (2.4.1.79 from EC) [, ].; GO: 0008378 galactosyltransferase activity, 0006486 protein glycosylation, 0016020 membrane
Probab=55.21 E-value=7.5 Score=34.99 Aligned_cols=47 Identities=13% Similarity=0.299 Sum_probs=31.4
Q ss_pred ecCCccccccc-hhhhhhhhhcccccc-cCccccCCCcccccchhhhHHHHHHHHH
Q 039651 196 VPAGTLMPISG-INIAFNRALVGPALF-PGLKLTGEGKLRWETIEDIWCGMCVKVI 249 (353)
Q Consensus 196 l~~Gt~~P~ns-qNtaF~r~a~~pa~y-p~~~~~~~g~~~~~R~~DIW~g~~~qri 249 (353)
.|.+.|-|.|+ .--++.++++ .-++ -.. .. +.+..+|++=|.|++++
T Consensus 139 y~~~~yP~y~~G~~yvls~~~v-~~i~~~~~-----~~-~~~~~eDv~iGi~~~~~ 187 (195)
T PF01762_consen 139 YPDDYYPPYCSGGGYVLSSDVV-KRIYKASS-----HT-PFFPLEDVFIGILAEKL 187 (195)
T ss_pred cccccCCCcCCCCeEEecHHHH-HHHHHHhh-----cC-CCCCchHHHHHHHHHHC
Confidence 55666666665 5556677777 6666 221 11 56889999999999863
No 51
>PRK13915 putative glucosyl-3-phosphoglycerate synthase; Provisional
Probab=48.41 E-value=20 Score=35.15 Aligned_cols=23 Identities=13% Similarity=0.215 Sum_probs=17.5
Q ss_pred eeeeeeEeeeeeeeccCCCCCCC
Q 039651 85 YFGYLVSRKKYIISVDDDCLPAK 107 (353)
Q Consensus 85 n~GyL~a~a~~I~~~DDDn~P~~ 107 (353)
|.|+-.|..+||+.+|.|+...+
T Consensus 108 ~~g~~~a~gd~vv~lDaD~~~~~ 130 (306)
T PRK13915 108 WRSLAATTGDIVVFVDADLINFD 130 (306)
T ss_pred HHHHHhcCCCEEEEEeCccccCC
Confidence 34666666999999999997443
No 52
>cd04191 Glucan_BSP_ModH Glucan_BSP_ModH catalyzes the elongation of beta-1,2 polyglucose chains of glucan. Periplasmic Glucan Biosynthesis protein ModH is a glucosyltransferase that catalyzes the elongation of beta-1,2 polyglucose chains of glucan, requiring a beta-glucoside as a primer and UDP-glucose as a substrate. Glucans are composed of 5 to 10 units of glucose forming a highly branched structure, where beta-1,2-linked glucose constitutes a linear backbone to which branches are attached by beta-1,6 linkages. In Escherichia coli, glucans are located in the periplasmic space, functioning as regulator of osmolarity. It is synthesized at a maximum when cells are grown in a medium with low osmolarity. It has been shown to span the cytoplasmic membrane.
Probab=37.21 E-value=13 Score=35.39 Aligned_cols=67 Identities=13% Similarity=-0.021 Sum_probs=38.1
Q ss_pred ccccccchhhhhhhhhccccc--ccCccccCCCcccc-cchhhhHHHHHHHHHHHHhCCeeeecccee-eecC-CCCch
Q 039651 200 TLMPISGINIAFNRALVGPAL--FPGLKLTGEGKLRW-ETIEDIWCGMCVKVICDHLSIGVKTGLPYV-FRSD-KGNPI 273 (353)
Q Consensus 200 t~~P~nsqNtaF~r~a~~pa~--yp~~~~~~~g~~~~-~R~~DIW~g~~~qri~~~lG~~V~fg~P~v-~~~r-~h~~l 273 (353)
...++++-|.+++|++| =.. +|..| +-|.|.. .=.+|..-|+-++ ..|+.|.|-+-.+ .... +.++-
T Consensus 167 ~~~~~~G~~~~~Rr~al-~~~~~~~~i~--g~g~~~~~~l~eD~~l~~~~~----~~G~ri~~~~~~~~~~~~~p~~~~ 238 (254)
T cd04191 167 GEGNYWGHNAIIRVAAF-MEHCALPVLP--GRPPFGGHILSHDFVEAALMR----RAGWEVRLAPDLEGSYEECPPTLI 238 (254)
T ss_pred CccCccceEEEEEHHHH-HHhcCCcccc--CCCCCCCCeecHHHHHHHHHH----HcCCEEEEccCCcceEeECCCCHH
Confidence 35678899999999997 221 11111 1122211 1145788777655 4799999954344 3444 54443
No 53
>PRK05454 glucosyltransferase MdoH; Provisional
Probab=31.27 E-value=23 Score=39.03 Aligned_cols=54 Identities=17% Similarity=0.083 Sum_probs=30.3
Q ss_pred cccccchhhhhhhhhccccc--ccCccccCCCccc-ccchhhhHHHHHHHHHHHHhCCeeeecc
Q 039651 201 LMPISGINIAFNRALVGPAL--FPGLKLTGEGKLR-WETIEDIWCGMCVKVICDHLSIGVKTGL 261 (353)
Q Consensus 201 ~~P~nsqNtaF~r~a~~pa~--yp~~~~~~~g~~~-~~R~~DIW~g~~~qri~~~lG~~V~fg~ 261 (353)
-..+++-|..++|++| -.. .|.+ .+-|.|. --=.+|+.-|..+++ .|+.|.|-+
T Consensus 293 ~g~f~G~naIiR~~af-~~~~glp~L--~g~~p~~~~~LseD~~~a~~l~~----~GyrV~~~p 349 (691)
T PRK05454 293 EGNYWGHNAIIRVKAF-AEHCGLPPL--PGRGPFGGHILSHDFVEAALMRR----AGWGVWLAP 349 (691)
T ss_pred ccccccceEEEEHHHH-HHhcCCccc--cccCCCCCCcccHHHHHHHHHHH----CCCEEEEcC
Confidence 3456789999999988 211 1111 0111110 012458877776654 799999943
No 54
>PF09039 HTH_Tnp_Mu_2: Mu DNA binding, I gamma subdomain; InterPro: IPR015126 This domain is responsible for binding the DNA attachment sites at each end of the Mu genome. They adopt a secondary structure comprising a four helix bundle tightly packed around a hydrophobic core consisting of aliphatic and aromatic amino acid residues. Helices 1 and 2 are oriented antiparallel to each other. Helix 3 crosses helices 1 and 2 at angles of 60 and 120 degrees, respectively. Excluding the C-terminal helix 4, the fold of the I-gamma subdomain is remarkably similar to that of the homeodomain family of helix-turn-helix DNA-binding proteins, although their amino acid sequences are completely unrelated []. ; PDB: 2EZL_A 2EZH_A 2EZI_A 2EZK_A.
Probab=30.40 E-value=50 Score=28.07 Aligned_cols=38 Identities=21% Similarity=0.246 Sum_probs=27.1
Q ss_pred hhhcchHHhhhcccCCCCCCCHHHHHHHHHHHHHhhcC
Q 039651 284 KKMEEIIPFFQSVRLPRTATTAEDCLLEMAKSVKDRLG 321 (353)
Q Consensus 284 ~~~e~ii~fl~~~~~~~~a~t~~~c~~eLa~~v~~~l~ 321 (353)
+..+++|+||.+--|-.+..++..||+.|....+++-+
T Consensus 30 ~~~~eaw~~fksdYLr~e~Ps~~~cyrr~~~~a~~~Gw 67 (108)
T PF09039_consen 30 EIDEEAWEFFKSDYLRPEKPSFSACYRRLKRAAKENGW 67 (108)
T ss_dssp -S-HHHHHHHHHHHTSTT---HHHHHHHHHHHHHHHT-
T ss_pred cCCHHHHHHHHHHHcCccCCCHHHHHHHHHHHHHHcCC
Confidence 34778999999976666888999999999998888843
No 55
>cd02514 GT13_GLCNAC-TI GT13_GLCNAC-TI is involved in an essential step in the synthesis of complex or hybrid-type N-linked oligosaccharides. Alpha-1,3-mannosyl-glycoprotein beta-1,2-N-acetylglucosaminyltransferase (GLCNAC-T I , GNT-I) transfers N-acetyl-D-glucosamine from UDP to high-mannose glycoprotein N-oligosaccharide, an essential step in the synthesis of complex or hybrid-type N-linked oligosaccharides. The enzyme is an integral membrane protein localized to the Golgi apparatus. The catalytic domain is located at the C-terminus. These proteins are members of the glycosy transferase family 13.
Probab=29.94 E-value=55 Score=33.03 Aligned_cols=16 Identities=31% Similarity=0.432 Sum_probs=14.8
Q ss_pred eeeeeeccCCCCCCCC
Q 039651 93 KKYIISVDDDCLPAKD 108 (353)
Q Consensus 93 a~~I~~~DDDn~P~~~ 108 (353)
.+++|-+|||+.|+.+
T Consensus 98 ~~~vIILEDDl~~sPd 113 (334)
T cd02514 98 YSFVIILEDDLDIAPD 113 (334)
T ss_pred CCEEEEECCCCccCHh
Confidence 7999999999999985
No 56
>cd00761 Glyco_tranf_GTA_type Glycosyltransferase family A (GT-A) includes diverse families of glycosyl transferases with a common GT-A type structural fold. Glycosyltransferases (GTs) are enzymes that synthesize oligosaccharides, polysaccharides, and glycoconjugates by transferring the sugar moiety from an activated nucleotide-sugar donor to an acceptor molecule, which may be a growing oligosaccharide, a lipid, or a protein. Based on the stereochemistry of the donor and acceptor molecules, GTs are classified as either retaining or inverting enzymes. To date, all GT structures adopt one of two possible folds, termed GT-A fold and GT-B fold. This hierarchy includes diverse families of glycosyl transferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. The majority of the proteins in this superfamily are Glycosyltransferase family 2 (GT-2) proteins. But it als
Probab=29.42 E-value=55 Score=25.56 Aligned_cols=22 Identities=36% Similarity=0.525 Sum_probs=16.5
Q ss_pred eeeeEeeeeeeeccCCCCCCCC
Q 039651 87 GYLVSRKKYIISVDDDCLPAKD 108 (353)
Q Consensus 87 GyL~a~a~~I~~~DDDn~P~~~ 108 (353)
|.-++..+|++.+|+|+.+..+
T Consensus 72 ~~~~~~~d~v~~~d~D~~~~~~ 93 (156)
T cd00761 72 GLKAARGEYILFLDADDLLLPD 93 (156)
T ss_pred HHHHhcCCEEEEECCCCccCcc
Confidence 3333348999999999998764
No 57
>PF13632 Glyco_trans_2_3: Glycosyl transferase family group 2
Probab=26.39 E-value=1.2e+02 Score=26.41 Aligned_cols=67 Identities=12% Similarity=0.179 Sum_probs=38.6
Q ss_pred Cccccccchhhhhhhhhccccc-ccCccccCCCcccccchhhhHHHHHHHHHHHHhCCeeeeccceeeecCCCCchhhhH
Q 039651 199 GTLMPISGINIAFNRALVGPAL-FPGLKLTGEGKLRWETIEDIWCGMCVKVICDHLSIGVKTGLPYVFRSDKGNPIESLK 277 (353)
Q Consensus 199 Gt~~P~nsqNtaF~r~a~~pa~-yp~~~~~~~g~~~~~R~~DIW~g~~~qri~~~lG~~V~fg~P~v~~~r~h~~l~Dl~ 277 (353)
|...++.+.|.+|+|+++ -.. . +. + ...-.+|+.-++= + ...|+.+.+-+=.+.+...-+.++++.
T Consensus 67 ~~~~~~~G~~~~~r~~~l-~~vg~--~~---~---~~~~~ED~~l~~~---l-~~~G~~~~~~~~~~~~~~~p~t~~~~~ 133 (193)
T PF13632_consen 67 GRPLFLSGSGMLFRREAL-REVGG--FD---D---PFSIGEDMDLGFR---L-RRAGYRIVYVPDAIVYTEAPPTFRAFI 133 (193)
T ss_pred CCCccccCcceeeeHHHH-HHhCc--cc---c---cccccchHHHHHH---H-HHCCCEEEEecccceeeeCCCCHHHHH
Confidence 445567899999999999 332 2 11 0 1122357765443 3 578999988543334444333455553
Q ss_pred h
Q 039651 278 K 278 (353)
Q Consensus 278 ~ 278 (353)
+
T Consensus 134 ~ 134 (193)
T PF13632_consen 134 R 134 (193)
T ss_pred H
Confidence 3
No 58
>cd06436 GlcNAc-1-P_transferase N-acetyl-glucosamine transferase is involved in the synthesis of Poly-beta-1,6-N-acetyl-D-glucosamine. N-acetyl-glucosamine transferase is responsible for the synthesis of bacteria Poly-beta-1,6-N-acetyl-D-glucosamine (PGA). Poly-beta-1,6-N-acetyl-D-glucosamine is a homopolymer that serves as an adhesion for the maintenance of biofilm structural stability in diverse eubacteria. N-acetyl-glucosamine transferase is the product of gene pgaC. Genetic analysis indicated that all four genes of the pgaABCD locus were required for the PGA production, pgaC being a glycosyltransferase.
Probab=26.06 E-value=64 Score=28.41 Aligned_cols=15 Identities=20% Similarity=0.153 Sum_probs=13.4
Q ss_pred eeeeeccCCCCCCCC
Q 039651 94 KYIISVDDDCLPAKD 108 (353)
Q Consensus 94 ~~I~~~DDDn~P~~~ 108 (353)
+||+.+|.|+.+..+
T Consensus 91 d~v~~~DaD~~~~~~ 105 (191)
T cd06436 91 VIIAVIDADGRLDPN 105 (191)
T ss_pred cEEEEECCCCCcCHh
Confidence 699999999998875
No 59
>cd02515 Glyco_transf_6 Glycosyltransferase family 6 comprises enzymes responsible for the production of the human ABO blood group antigens. Glycosyltransferase family 6, GT_6, comprises enzymes with three known activities: alpha-1,3-galactosyltransferase, alpha-1,3 N-acetylgalactosaminyltransferase, and alpha-galactosyltransferase. UDP-galactose:beta-galactosyl alpha-1,3-galactosyltransferase (alpha3GT) catalyzes the transfer of galactose from UDP-alpha-d-galactose into an alpha-1,3 linkage with beta-galactosyl groups in glycoconjugates. The enzyme exists in most mammalian species but is absent from humans, apes, and old world monkeys as a result of the mutational inactivation of the gene. The alpha-1,3 N-acetylgalactosaminyltransferase and alpha-galactosyltransferase are responsible for the production of the human ABO blood group antigens. A N-acetylgalactosaminyltransferases use a UDP-GalNAc donor to convert the H-antigen acceptor to the A antigen, whereas a galactosyltransferase use
Probab=24.87 E-value=1.3e+02 Score=29.69 Aligned_cols=91 Identities=15% Similarity=0.192 Sum_probs=49.9
Q ss_pred eEEEEEecccChHHHHHHHhhccc-------CceEEEEeCCCccccCCCCC-----CceEEeechhhhhhhccccchhh-
Q 039651 11 VDIVIAALQSDLTSFLNAWRPLFS-------RFHLIIVQDPDLKGELKIPQ-----GFDHRVYTKSDIDQVIGPTTSIV- 77 (353)
Q Consensus 11 ~~IVvttI~~~~~~fl~~~~~~~~-------~~~lvvV~D~d~~~~~ktP~-----g~~~~~~s~~~q~~~~~~~~~~i- 77 (353)
|.|.+=++ ..++.|++.+-++++ +-+..|-+|... ..|. +=...++.+..-.+|... ++.
T Consensus 36 Igl~vfat-GkY~~f~~~F~~SAEk~Fm~g~~v~YyVFTD~~~----~~p~v~lg~~r~~~V~~v~~~~~W~~~--sl~R 108 (271)
T cd02515 36 IGLTVFAV-GKYTEFLERFLESAEKHFMVGYRVIYYIFTDKPA----AVPEVELGPGRRLTVLKIAEESRWQDI--SMRR 108 (271)
T ss_pred EEEEEEEe-ccHHHHHHHHHHHHHHhccCCCeeEEEEEeCCcc----cCcccccCCCceeEEEEeccccCCcHH--HHHH
Confidence 33333344 466678888877764 446889999544 4443 344666666333556553 332
Q ss_pred ccccccceeeeeeEeeeeeeeccCCCCCCCC
Q 039651 78 FSGYSCRYFGYLVSRKKYIISVDDDCLPAKD 108 (353)
Q Consensus 78 ~~s~arkn~GyL~a~a~~I~~~DDDn~P~~~ 108 (353)
++-.....-.-...-.+|++++|-|..=.+.
T Consensus 109 m~~~~~~~~~~~~~e~DYlF~~dvd~~F~~~ 139 (271)
T cd02515 109 MKTLADHIADRIGHEVDYLFCMDVDMVFQGP 139 (271)
T ss_pred HHHHHHHHHHhhcccCCEEEEeeCCceEeec
Confidence 3222211112222237888888888775554
No 60
>COG1093 SUI2 Translation initiation factor 2, alpha subunit (eIF-2alpha) [Translation, ribosomal structure and biogenesis]
Probab=24.05 E-value=1.4e+02 Score=29.43 Aligned_cols=68 Identities=19% Similarity=0.342 Sum_probs=44.8
Q ss_pred hhhhHhhhhhhhhhcchHHhhhcccCCCCCCCHHHHHHHHHHHHHhhcCCCChHHHHHHH---------HH-HHHHHHHH
Q 039651 273 IESLKKEWEGVKKMEEIIPFFQSVRLPRTATTAEDCLLEMAKSVKDRLGGTDPLFARAAE---------AM-VEWVKIWK 342 (353)
Q Consensus 273 l~Dl~~E~~g~~~~e~ii~fl~~~~~~~~a~t~~~c~~eLa~~v~~~l~~~~~f~~~~a~---------~m-~~W~~~l~ 342 (353)
+...|+|.... .++++..+ +...++++||++++..+.++.+++=..|...+. .. +.|++.+.
T Consensus 94 ~~~wk~~qka~----klle~aae----kl~~~~ee~~~~vg~~L~e~fG~~y~aFE~aa~~g~~~l~~~~~~~~~~~~l~ 165 (269)
T COG1093 94 IQEWKKEQKAD----KLLELAAE----KLGKDLEEAYEEVGWKLEEEFGSLYDAFEAAAKEGGEVLDDEGVPEEWKEVLK 165 (269)
T ss_pred HHHHHHHHHHH----HHHHHHHH----HhCCCHHHHHHHHhHHHHHHhCCHHHHHHHHHhcCCcccccCCCCHHHHHHHH
Confidence 33444555444 34444433 235789999999999999998986666664433 22 58999998
Q ss_pred HhCCCC
Q 039651 343 AAGASH 348 (353)
Q Consensus 343 ~l~~~~ 348 (353)
++-+..
T Consensus 166 e~a~e~ 171 (269)
T COG1093 166 EIAREN 171 (269)
T ss_pred HHHHhc
Confidence 886543
No 61
>PF04666 Glyco_transf_54: N-Acetylglucosaminyltransferase-IV (GnT-IV) conserved region; InterPro: IPR006759 The complex-type of oligosaccharides are synthesised through elongation by glycosyltransferases after trimming of the precursor oligosaccharides transferred to proteins in the endoplasmic reticulum. N-Acetylglucosaminyltransferases (GnTs) take part in the formation of branches in the biosynthesis of complex-type sugar chains. In vertebrates, six GnTs, designated as GnT-I to -VI, which catalyse the transfer of GlcNAc to the core mannose residues of Asn-linked sugar chains, have been identified. GnT-IV (2.4.1.145 from EC) catalyzes the transfer of GlcNAc from UDP-GlcNAc to the GlcNAc1-2Man1-3 arm of core oligosaccharide [Gn2(22)core oligosaccharide] and forms a GlcNAc1-4(GlcNAc1-2)Man1-3 structure on the core oligosaccharide (Gn3(2,4,2)core oligosaccharide). In some members the conserved region occupies all but the very N-terminal, where there is a signal sequence on all members. For other members the conserved region does not occupy the entire protein but is still to the N-terminal end of the protein [].; GO: 0016758 transferase activity, transferring hexosyl groups, 0005975 carbohydrate metabolic process, 0016020 membrane
Probab=22.43 E-value=46 Score=33.06 Aligned_cols=32 Identities=16% Similarity=0.374 Sum_probs=21.1
Q ss_pred ccccccceeeeeeEe----eeeeeeccCCCCCCCCC
Q 039651 78 FSGYSCRYFGYLVSR----KKYIISVDDDCLPAKDN 109 (353)
Q Consensus 78 ~~s~arkn~GyL~a~----a~~I~~~DDDn~P~~~~ 109 (353)
|.+=.+--+-||+.. ++|.+-+.||-...+++
T Consensus 151 wrsKq~lDya~Lm~y~~~~~~YyL~LEDDVia~~~f 186 (297)
T PF04666_consen 151 WRSKQNLDYAFLMNYCQNLGDYYLQLEDDVIAAPGF 186 (297)
T ss_pred HHHhhcccHHHHHHHHHhcCCeEEEecCCeEechhH
Confidence 444333344455544 89999999998877753
No 62
>COG1110 Reverse gyrase [DNA replication, recombination, and repair]
Probab=21.71 E-value=65 Score=37.49 Aligned_cols=38 Identities=34% Similarity=0.560 Sum_probs=32.5
Q ss_pred cCCCCCceEEEEEecccChHHHHHHHhhccc--CceEEEEeCCCc
Q 039651 4 EHIDDSEVDIVIAALQSDLTSFLNAWRPLFS--RFHLIIVQDPDL 46 (353)
Q Consensus 4 ~~~~~~~~~IVvttI~~~~~~fl~~~~~~~~--~~~lvvV~D~d~ 46 (353)
..|.+||.+|.|||. .||..-++.+. +|.||.|-|-|.
T Consensus 175 e~i~~gdfdIlitTs-----~FL~k~~e~L~~~kFdfifVDDVDA 214 (1187)
T COG1110 175 ERIESGDFDILITTS-----QFLSKRFEELSKLKFDFIFVDDVDA 214 (1187)
T ss_pred HHHhcCCccEEEEeH-----HHHHhhHHHhcccCCCEEEEccHHH
Confidence 357899999999999 89988888888 577999998664
No 63
>PF14409 Herpeto_peptide: Ribosomally synthesized peptide in Herpetosiphon
Probab=21.67 E-value=1.2e+02 Score=23.27 Aligned_cols=22 Identities=23% Similarity=0.475 Sum_probs=17.4
Q ss_pred hHHHHHHHHHHHHHHHHHHh-CC
Q 039651 325 PLFARAAEAMVEWVKIWKAA-GA 346 (353)
Q Consensus 325 ~f~~~~a~~m~~W~~~l~~l-~~ 346 (353)
-+|...++-..+|+++|+.+ |+
T Consensus 20 ~~le~eaa~~~~~V~~~~~~~G~ 42 (58)
T PF14409_consen 20 TYLEEEAAEINDVVGCWKPRDGS 42 (58)
T ss_pred HHHHHHHHHHHHHHHhhhhccCC
Confidence 45677788899999999965 53
No 64
>COG1215 Glycosyltransferases, probably involved in cell wall biogenesis [Cell envelope biogenesis, outer membrane]
Probab=21.15 E-value=97 Score=30.58 Aligned_cols=86 Identities=15% Similarity=0.284 Sum_probs=49.6
Q ss_pred CceEEEEEecccChHHHHHHHhhcc-----cCceEEEEeCCCccccCCCCCCceEEeechhhhhhhccccc-hhh-c---
Q 039651 9 SEVDIVIAALQSDLTSFLNAWRPLF-----SRFHLIIVQDPDLKGELKIPQGFDHRVYTKSDIDQVIGPTT-SIV-F--- 78 (353)
Q Consensus 9 ~~~~IVvttI~~~~~~fl~~~~~~~-----~~~~lvvV~D~d~~~~~ktP~g~~~~~~s~~~q~~~~~~~~-~~i-~--- 78 (353)
-.+.|+||+. ++..+.+++...++ .++.++||-|+.+ .+-+. -.++...... ... .
T Consensus 54 p~vsviiP~y-nE~~~~~~~~l~s~~~~dyp~~evivv~d~~~------d~~~~-------~~~~~~~~~~~~~~~~~~~ 119 (439)
T COG1215 54 PKVSVIIPAY-NEEPEVLEETLESLLSQDYPRYEVIVVDDGST------DETYE-------ILEELGAEYGPNFRVIYPE 119 (439)
T ss_pred CceEEEEecC-CCchhhHHHHHHHHHhCCCCCceEEEECCCCC------hhHHH-------HHHHHHhhcCcceEEEecc
Confidence 5799999999 76646888887664 2467888888322 22111 1111111110 000 0
Q ss_pred ccccc----ceeeeeeEeeeeeeeccCCCCCCCC
Q 039651 79 SGYSC----RYFGYLVSRKKYIISVDDDCLPAKD 108 (353)
Q Consensus 79 ~s~ar----kn~GyL~a~a~~I~~~DDDn~P~~~ 108 (353)
+.... =|.|+-.|..|+|+.+|-|..|.+|
T Consensus 120 ~~~~gK~~al~~~l~~~~~d~V~~~DaD~~~~~d 153 (439)
T COG1215 120 KKNGGKAGALNNGLKRAKGDVVVILDADTVPEPD 153 (439)
T ss_pred ccCccchHHHHHHHhhcCCCEEEEEcCCCCCChh
Confidence 01111 1245555669999999999999985
No 65
>PF03993 DUF349: Domain of Unknown Function (DUF349); InterPro: IPR007139 This motif is found singly or as up to five tandem repeats in a small set of bacterial proteins. There are two or three alpha-helices, and possibly a beta-strand.
Probab=20.60 E-value=2.5e+02 Score=21.18 Aligned_cols=36 Identities=22% Similarity=0.342 Sum_probs=26.1
Q ss_pred HHHHHHHHHhhcCCCChHHHHHHHHHHHHHHHHHHhCC
Q 039651 309 LLEMAKSVKDRLGGTDPLFARAAEAMVEWVKIWKAAGA 346 (353)
Q Consensus 309 ~~eLa~~v~~~l~~~~~f~~~~a~~m~~W~~~l~~l~~ 346 (353)
-.+|.+.+++-....+ |....+.|....+.|+++|+
T Consensus 36 K~~Li~~~~~l~~~~d--~~~~~~~~k~l~~~Wk~iG~ 71 (77)
T PF03993_consen 36 KEALIEEAEALAESED--WKEAAEEIKELQQEWKEIGP 71 (77)
T ss_pred HHHHHHHHHHhccccc--HHHHHHHHHHHHHHHHHcCC
Confidence 3556666655555444 77888889999999999985
Done!