BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 039654
(225 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9FKK2|AGL62_ARATH Agamous-like MADS-box protein AGL62 OS=Arabidopsis thaliana
GN=AGL62 PE=1 SV=1
Length = 299
Score = 225 bits (573), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 120/216 (55%), Positives = 155/216 (71%), Gaps = 7/216 (3%)
Query: 7 KKSKGRQKVEMVKMPNESNLQVTFSKRRTGLFKKASELCTLCGADIAIIVFSPGKKVFSF 66
KKSKGRQK+EMVKM NESNLQVTFSKRR+GLFKKASELCTLCGA++AI+VFSPG+KVFSF
Sbjct: 3 KKSKGRQKIEMVKMKNESNLQVTFSKRRSGLFKKASELCTLCGAEVAIVVFSPGRKVFSF 62
Query: 67 GHPCVETIVDRYLTRN--PPQISGTMQLIEAHRNASVRELNMQLTQVLNQLEIEKKRGEE 124
GHP V++++DR++ N PP MQL E RN+ V++LN LTQVL+QLE EKK+ +E
Sbjct: 63 GHPNVDSVIDRFINNNPLPPHQHNNMQLRETRRNSIVQDLNNHLTQVLSQLETEKKKYDE 122
Query: 125 LNQMRKASQAQC-WWEAPIEELNLPQLEQLKMSLEELKKNVGKQAEKMLIQSSNPPQFFA 183
L ++R+ ++A WWE P+EEL L QLE K +LE LKK V +A + +N P F+
Sbjct: 123 LKKIREKTKALGNWWEDPVEELALSQLEGFKGNLENLKKVVTVEASRFF--QANVPNFYV 180
Query: 184 GSSSN--AGGMNLPFDPNNNAAVFNPNNMMPHPGYN 217
GSSSN A G++ N + +F+ MM +N
Sbjct: 181 GSSSNNAAFGIDDGSHINPDMDLFSQRRMMDINAFN 216
>sp|Q4PSU4|AGL61_ARATH Agamous-like MADS-box protein AGL61 OS=Arabidopsis thaliana
GN=AGL61 PE=1 SV=1
Length = 264
Score = 182 bits (462), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 91/160 (56%), Positives = 122/160 (76%), Gaps = 5/160 (3%)
Query: 8 KSKGRQKVEMVKMPNESNLQVTFSKRRTGLFKKASELCTLCGADIAIIVFSPGKKVFSFG 67
+S GRQK+ MVK+ ES+ QVTFSKRR GLFKKASELCTLCGA+I IIVFSP KK FSFG
Sbjct: 60 ESIGRQKIPMVKIKKESHRQVTFSKRRAGLFKKASELCTLCGAEIGIIVFSPAKKPFSFG 119
Query: 68 HPCVETIVDRYLTRNPPQISGTMQLIEAHRNASVRELNMQLTQVLNQLEIEKKRGEELNQ 127
HP VE+++DRY++RN ++ + QL A+ ELNMQLT +L+++E EKK+G+ + +
Sbjct: 120 HPSVESVLDRYVSRNNMSLAQSQQL--QGSPAASCELNMQLTHILSEVEEEKKKGQAMEE 177
Query: 128 MRKASQAQC---WWEAPIEELNLPQLEQLKMSLEELKKNV 164
MRK S + WWE P+EE+N+ QL+++K +LEEL+K V
Sbjct: 178 MRKESVRRSMINWWEKPVEEMNMVQLQEMKYALEELRKTV 217
>sp|Q9M2K8|AGL18_ARATH Agamous-like MADS-box protein AGL18 OS=Arabidopsis thaliana
GN=AGL18 PE=2 SV=1
Length = 256
Score = 83.2 bits (204), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 48/125 (38%), Positives = 72/125 (57%), Gaps = 7/125 (5%)
Query: 11 GRQKVEMVKMPNESNLQVTFSKRRTGLFKKASELCTLCGADIAIIVFSPGKKVFSFGHPC 70
GR ++E+ K+ N ++ QVTFSKRR GL KKA EL LC A++A+I+FS K++ F C
Sbjct: 2 GRGRIEIKKIENINSRQVTFSKRRNGLIKKAKELSILCDAEVALIIFSSTGKIYDFSSVC 61
Query: 71 VETIVDRY-----LTRNPPQISGTMQLIEAHRNASVRELNMQLTQVLN--QLEIEKKRGE 123
+E I+ RY T + Q + + +H N +V + + L QL IE+ +G+
Sbjct: 62 MEQILSRYGYTTASTEHKQQREHQLLICASHGNEAVLRNDDSMKGELERLQLAIERLKGK 121
Query: 124 ELNQM 128
EL M
Sbjct: 122 ELEGM 126
>sp|Q40704|MADS3_ORYSJ MADS-box transcription factor 3 OS=Oryza sativa subsp. japonica
GN=MADS3 PE=2 SV=1
Length = 236
Score = 82.0 bits (201), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 70/229 (30%), Positives = 112/229 (48%), Gaps = 27/229 (11%)
Query: 11 GRQKVEMVKMPNESNLQVTFSKRRTGLFKKASELCTLCGADIAIIVFSPGKKVFSFGHPC 70
GR K+E+ ++ N +N QVTF KRR GL KKA EL LC A++A+IVFS +++ + +
Sbjct: 2 GRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYANNS 61
Query: 71 VETIVDRYLTRNPPQI-SGTMQLIEAHRNASVRELNMQLTQVLNQLEIEKKR---GEELN 126
V++ V+RY N SGT+ + A ++ + +L Q ++ L+ R G+ +N
Sbjct: 62 VKSTVERYKKANSDTSNSGTVAEVNAQH---YQQESSKLRQQISSLQNANSRTIVGDSIN 118
Query: 127 QM--RKASQAQCWWEAPIEELNLPQLEQLKMSLEEL-KKNVGKQAEKMLIQSS------- 176
M R Q + E I ++ + E L +E + K+ V Q + M ++S
Sbjct: 119 TMSLRDLKQVENRLEKGIAKIRARKNELLYAEVEYMQKREVELQNDNMYLRSKVVENERG 178
Query: 177 -NPPQFF-AGSSSNAGGM-NLPFDPNNNAAVFNPNNMMPHPGYNPGFGH 222
P A S+S M N P+D N F N+M P + + H
Sbjct: 179 QQPLNMMGAASTSEYDHMVNNPYDSRN----FLQVNIMQQPQH---YAH 220
>sp|Q39371|3AP1_BRAOL Floral homeotic protein APETALA 1 OS=Brassica oleracea GN=AP1
PE=2 SV=1
Length = 256
Score = 81.6 bits (200), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 35/69 (50%), Positives = 51/69 (73%), Gaps = 1/69 (1%)
Query: 11 GRQKVEMVKMPNESNLQVTFSKRRTGLFKKASELCTLCGADIAIIVFSPGKKVFSFG-HP 69
GR +V++ ++ N+ N QVTFSKRR GLFKKA E+ LC A++A++VFS K+F + P
Sbjct: 2 GRGRVQLKRIENKINRQVTFSKRRAGLFKKAHEISVLCDAEVALVVFSHKGKLFEYSTDP 61
Query: 70 CVETIVDRY 78
C+E I++RY
Sbjct: 62 CMEKILERY 70
>sp|Q5K4R0|MAD47_ORYSJ MADS-box transcription factor 47 OS=Oryza sativa subsp. japonica
GN=MADS47 PE=1 SV=2
Length = 246
Score = 81.3 bits (199), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 52/154 (33%), Positives = 82/154 (53%), Gaps = 31/154 (20%)
Query: 12 RQKVEMVKMPNESNLQVTFSKRRTGLFKKASELCTLCGADIAIIVFSPGKKVFSFGHPCV 71
R+++ + ++ N + QVTFSKRR GLFKKA EL LC A++ ++VFS K+F F +
Sbjct: 22 RERIAIRRIDNLAARQVTFSKRRRGLFKKAEELSILCDAEVGLVVFSATGKLFQFASTSM 81
Query: 72 ETIVDRY------LTR-NPPQISGTMQLIEAHRNASVRELNMQLTQVLNQLEIEKKRGEE 124
E I+DRY L R P Q+ ++ +++ L +L + L + + RGEE
Sbjct: 82 EQIIDRYNSHSKTLQRAEPSQLD-----LQGEDSSTCARLKEELAET--SLRLRQMRGEE 134
Query: 125 LNQMRKASQAQCWWEAPIEELNLPQLEQLKMSLE 158
L++ LN+ QL++L+ SLE
Sbjct: 135 LHR-----------------LNVEQLQELEKSLE 151
>sp|Q9FUY6|JOIN_SOLLC MADS-box protein JOINTLESS OS=Solanum lycopersicum GN=J PE=1 SV=1
Length = 265
Score = 80.9 bits (198), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 55/168 (32%), Positives = 98/168 (58%), Gaps = 28/168 (16%)
Query: 11 GRQKVEMVKMPNESNLQVTFSKRRTGLFKKASELCTLCGADIAIIVFSPGKKVFSFGHPC 70
R+K+++ K+ N + QVTFSKRR GLFKKA EL LC AD+A+I+FS K+F +
Sbjct: 2 AREKIQIKKIDNSTARQVTFSKRRRGLFKKAEELSVLCDADVALIIFSSTGKLFDYSSSS 61
Query: 71 VETIVDR--YLTRNPPQI---SGTMQLIEAHRNASVRELNMQLTQVLNQLEIEKKRGEEL 125
++ I++R ++N ++ S +QL+E N++ L+ ++++ ++L + RGEEL
Sbjct: 62 MKQILERRDLHSKNLEKLDQPSLELQLVE---NSNYSRLSKEISEKSHRL--RQMRGEEL 116
Query: 126 NQMRKASQAQCWWEAPIEELNLPQLEQLKMSLEE-LKKNVGKQAEKML 172
+ LN+ +L+QL+ SLE L + + ++ +K++
Sbjct: 117 -----------------QGLNIEELQQLERSLETGLSRVIERKGDKIM 147
>sp|Q9FVC1|SVP_ARATH MADS-box protein SVP OS=Arabidopsis thaliana GN=SVP PE=1 SV=1
Length = 240
Score = 80.9 bits (198), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 48/129 (37%), Positives = 78/129 (60%), Gaps = 8/129 (6%)
Query: 11 GRQKVEMVKMPNESNLQVTFSKRRTGLFKKASELCTLCGADIAIIVFSPGKKVFSFGHPC 70
R+K+++ K+ N + QVTFSKRR GLFKKA EL LC AD+A+I+FS K+F F
Sbjct: 2 AREKIQIRKIDNATARQVTFSKRRRGLFKKAEELSVLCDADVALIIFSSTGKLFEFCSSS 61
Query: 71 VETIVDRY--LTRNPPQI---SGTMQLIEAHRNASVRELNMQLTQVLNQLEIEKKRG--- 122
++ +++R+ ++N ++ S +QL+E +A + + + L Q+ E+ +G
Sbjct: 62 MKEVLERHNLQSKNLEKLDQPSLELQLVENSDHARMSKEIADKSHRLRQMRGEELQGLDI 121
Query: 123 EELNQMRKA 131
EEL Q+ KA
Sbjct: 122 EELQQLEKA 130
>sp|Q944S9|MAD16_ORYSJ MADS-box transcription factor 16 OS=Oryza sativa subsp. japonica
GN=MADS16 PE=1 SV=2
Length = 224
Score = 80.1 bits (196), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 56/166 (33%), Positives = 82/166 (49%), Gaps = 15/166 (9%)
Query: 11 GRQKVEMVKMPNESNLQVTFSKRRTGLFKKASELCTLCGADIAIIVFSPGKKVFSFGHPC 70
GR K+E+ ++ N +N QVT+SKRRTG+ KKA EL LC A +AII+FS K F P
Sbjct: 2 GRGKIEIKRIENATNRQVTYSKRRTGIMKKARELTVLCDAQVAIIMFSSTGKYHEFCSPS 61
Query: 71 VET--IVDRYLTRNPPQISGTMQLIEAHRN-----ASVRELNMQLTQVLNQLEIEKKRGE 123
+ I DRY Q GT IE + N + ++++N L + Q E G
Sbjct: 62 TDIKGIFDRY-----QQAIGTSLWIEQYENMQRTLSHLKDINRNLRTEIRQRMGEDLDGL 116
Query: 124 ELNQMRKASQAQCWWEAPIEELNLPQLEQLKMSLEELKKNVGKQAE 169
E +++R Q +A ++E+ + + E KK V E
Sbjct: 117 EFDELRGLEQN---VDAALKEVRHRKYHVITTQTETYKKKVKHSYE 159
>sp|P29386|AGL6_ARATH Agamous-like MADS-box protein AGL6 OS=Arabidopsis thaliana
GN=AGL6 PE=1 SV=2
Length = 252
Score = 79.7 bits (195), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 38/82 (46%), Positives = 54/82 (65%), Gaps = 7/82 (8%)
Query: 11 GRQKVEMVKMPNESNLQVTFSKRRTGLFKKASELCTLCGADIAIIVFSPGKKVFSFGHPC 70
GR +VEM ++ N+ N QVTFSKRR GL KKA EL LC A++A+I+FS K++ FG
Sbjct: 2 GRGRVEMKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEFGSVG 61
Query: 71 VETIVDRY-------LTRNPPQ 85
+E+ ++RY L+ N P+
Sbjct: 62 IESTIERYNRCYNCSLSNNKPE 83
>sp|Q9ATE5|FBP24_PETHY MADS-box protein FBP24 OS=Petunia hybrida GN=FBP24 PE=1 SV=1
Length = 268
Score = 79.7 bits (195), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 56/167 (33%), Positives = 91/167 (54%), Gaps = 15/167 (8%)
Query: 11 GRQKVEMVKMPNESNLQVTFSKRRTGLFKKASELCTLCGADIAIIVFSPGKKVFSF-GHP 69
GR K+E+ ++ N+++ QVTFSKRR GL KK EL LC A I +I+FS K+F + P
Sbjct: 5 GRGKIEVKRIENKTSRQVTFSKRRAGLLKKTHELSVLCDAQIGLIIFSSKGKLFEYCSQP 64
Query: 70 -CVETIVDRYLTRNPPQISGTMQLIEAHRNASVRELNMQLTQVLN-QLEIEKKRGEELN- 126
+ I+ RYL Q +G +E +R E+ LN QL +++ +G++L+
Sbjct: 65 HSMSQIISRYL-----QTTGASLPVEDNRVQLYDEVAKMRRDTLNLQLSLQRYKGDDLSL 119
Query: 127 -QMRKASQAQCWWEAPIEELNLPQLEQLKMSLEELKKNVGKQAEKML 172
Q + ++ + E + ++ +LE ++ +E LKK EKML
Sbjct: 120 AQYEELNELEKQLEHALNKIRARKLELMQQQMENLKK-----TEKML 161
>sp|Q6VAM4|MAD23_ORYSJ MADS-box transcription factor 23 OS=Oryza sativa subsp. japonica
GN=MADS23 PE=2 SV=1
Length = 159
Score = 79.7 bits (195), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 31/68 (45%), Positives = 50/68 (73%)
Query: 11 GRQKVEMVKMPNESNLQVTFSKRRTGLFKKASELCTLCGADIAIIVFSPGKKVFSFGHPC 70
GR K+E+ ++ N ++ QVTFSKRR+GLFKKA EL LC A++ ++VFS +++ F
Sbjct: 2 GRGKIEIKRIDNATSRQVTFSKRRSGLFKKARELSILCDAEVGLLVFSSTSRLYDFASSS 61
Query: 71 VETIVDRY 78
+++I++RY
Sbjct: 62 MKSIIERY 69
>sp|Q9XJ66|MAD22_ORYSJ MADS-box transcription factor 22 OS=Oryza sativa subsp. japonica
GN=MADS22 PE=2 SV=1
Length = 228
Score = 79.0 bits (193), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 54/168 (32%), Positives = 90/168 (53%), Gaps = 15/168 (8%)
Query: 11 GRQKVEMVKMPNESNLQVTFSKRRTGLFKKASELCTLCGADIAIIVFSPGKKVFSFGHPC 70
R++ E+ ++ + + QVTFSKRR GLFKKA EL LC AD+A+IVFS K+ F
Sbjct: 2 ARERREIKRIESAAARQVTFSKRRRGLFKKAEELSVLCDADVALIVFSSTGKLSHFASSS 61
Query: 71 VETIVDRYLTRN-------PPQISGTMQLIE-AHRNASVRELNMQLTQVLNQLEIEKKRG 122
+ I+D+Y T + P + ++ + AH N + E +++L Q+ + E+E
Sbjct: 62 MNEIIDKYNTHSNNLGKAEQPSLDLNLEHSKYAHLNEQLAEASLRLRQMRGE-ELEGLSI 120
Query: 123 EELNQMRKASQAQCWWEAPIEELNLPQLEQLKMSLEELKKNVGKQAEK 170
+EL Q+ K EA + + L + +Q + EL++ + AE+
Sbjct: 121 DELQQLEKN------LEAGLHRVMLTKDQQFMEQISELQRKSSQLAEE 162
>sp|O82743|AGL19_ARATH Agamous-like MADS-box protein AGL19 OS=Arabidopsis thaliana
GN=AGL19 PE=1 SV=1
Length = 219
Score = 78.6 bits (192), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 42/110 (38%), Positives = 65/110 (59%), Gaps = 3/110 (2%)
Query: 12 RQKVEMVKMPNESNLQVTFSKRRTGLFKKASELCTLCGADIAIIVFSPGKKVFSFGHPCV 71
R K EM ++ N ++ QVTFSKRR GL KKA EL LC A++A+++FSP K++ F +
Sbjct: 3 RGKTEMKRIENATSRQVTFSKRRNGLLKKAFELSVLCDAEVALVIFSPRSKLYEFSSSSI 62
Query: 72 ETIVDRYLTRNPPQISGTMQLIEAHRNASVRELNMQLTQVLNQLEIEKKR 121
++RY R +I + + + A R+ LT+ + QLEI K++
Sbjct: 63 AATIERY-QRRIKEIGNNHKRNDNSQQA--RDETSGLTKKIEQLEISKRK 109
>sp|P0DI14|AP1_BRARP Floral homeotic protein APETALA 1 OS=Brassica rapa subsp.
pekinensis GN=AP1 PE=3 SV=1
Length = 256
Score = 78.2 bits (191), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 34/69 (49%), Positives = 50/69 (72%), Gaps = 1/69 (1%)
Query: 11 GRQKVEMVKMPNESNLQVTFSKRRTGLFKKASELCTLCGADIAIIVFSPGKKVFSFG-HP 69
GR +V++ ++ N+ N QVTFSKRR GLFKKA E+ LC A++A++VFS K+F +
Sbjct: 2 GRGRVQLKRIENKINRQVTFSKRRAGLFKKAHEISVLCDAEVALVVFSHKGKLFEYSTDS 61
Query: 70 CVETIVDRY 78
C+E I++RY
Sbjct: 62 CMEKILERY 70
>sp|Q39081|CAL_ARATH Transcription factor CAULIFLOWER OS=Arabidopsis thaliana GN=CAL
PE=1 SV=3
Length = 255
Score = 78.2 bits (191), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 34/69 (49%), Positives = 50/69 (72%), Gaps = 1/69 (1%)
Query: 11 GRQKVEMVKMPNESNLQVTFSKRRTGLFKKASELCTLCGADIAIIVFSPGKKVFSF-GHP 69
GR +VE+ ++ N+ N QVTFSKRRTGL KKA E+ LC A++++IVFS K+F +
Sbjct: 2 GRGRVELKRIENKINRQVTFSKRRTGLLKKAQEISVLCDAEVSLIVFSHKGKLFEYSSES 61
Query: 70 CVETIVDRY 78
C+E +++RY
Sbjct: 62 CMEKVLERY 70
>sp|Q8GTF4|AP1C_BRAOB Floral homeotic protein APETALA 1 C OS=Brassica oleracea var.
botrytis GN=AP1C PE=2 SV=1
Length = 256
Score = 78.2 bits (191), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 34/69 (49%), Positives = 50/69 (72%), Gaps = 1/69 (1%)
Query: 11 GRQKVEMVKMPNESNLQVTFSKRRTGLFKKASELCTLCGADIAIIVFSPGKKVFSFG-HP 69
GR +V++ ++ N+ N QVTFSKRR GLFKKA E+ LC A++A++VFS K+F +
Sbjct: 2 GRGRVQLKRIENKINRQVTFSKRRAGLFKKAHEISVLCDAEVALVVFSHKGKLFEYSTDS 61
Query: 70 CVETIVDRY 78
C+E I++RY
Sbjct: 62 CMEKILERY 70
>sp|B4YPV4|AP1C_BRAOA Floral homeotic protein APETALA 1 C OS=Brassica oleracea var.
alboglabra GN=AP1C PE=3 SV=1
Length = 256
Score = 78.2 bits (191), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 34/69 (49%), Positives = 50/69 (72%), Gaps = 1/69 (1%)
Query: 11 GRQKVEMVKMPNESNLQVTFSKRRTGLFKKASELCTLCGADIAIIVFSPGKKVFSFG-HP 69
GR +V++ ++ N+ N QVTFSKRR GLFKKA E+ LC A++A++VFS K+F +
Sbjct: 2 GRGRVQLKRIENKINRQVTFSKRRAGLFKKAHEISVLCDAEVALVVFSHKGKLFEYSTDS 61
Query: 70 CVETIVDRY 78
C+E I++RY
Sbjct: 62 CMEKILERY 70
>sp|Q96355|1AP1_BRAOT Floral homeotic protein APETALA 1-1 OS=Brassica oleracea var.
italica GN=1AP1 PE=2 SV=1
Length = 256
Score = 78.2 bits (191), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 34/69 (49%), Positives = 50/69 (72%), Gaps = 1/69 (1%)
Query: 11 GRQKVEMVKMPNESNLQVTFSKRRTGLFKKASELCTLCGADIAIIVFSPGKKVFSFG-HP 69
GR +V++ ++ N+ N QVTFSKRR GLFKKA E+ LC A++A++VFS K+F +
Sbjct: 2 GRGRVQLKRIENKINRQVTFSKRRAGLFKKAHEISVLCDAEVALVVFSHKGKLFEYSTDS 61
Query: 70 CVETIVDRY 78
C+E I++RY
Sbjct: 62 CMEKILERY 70
>sp|Q6R4R9|CALA_BRAOB Truncated transcription factor CAULIFLOWER A OS=Brassica oleracea
var. botrytis GN=CAL-A PE=2 SV=2
Length = 150
Score = 77.8 bits (190), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 34/69 (49%), Positives = 49/69 (71%), Gaps = 1/69 (1%)
Query: 11 GRQKVEMVKMPNESNLQVTFSKRRTGLFKKASELCTLCGADIAIIVFSPGKKVFSF-GHP 69
GR +VEM ++ N+ N QVTFSKRR GL KKA E+ LC A++++IVFS K+F +
Sbjct: 2 GRGRVEMKRIENKINRQVTFSKRRAGLLKKAHEISILCDAEVSLIVFSHKGKLFEYSSES 61
Query: 70 CVETIVDRY 78
C+E +++RY
Sbjct: 62 CMEKVLERY 70
>sp|Q6R4S6|CAL_BRARC Transcription factor CAULIFLOWER OS=Brassica rapa subsp.
chinensis GN=CAL PE=2 SV=1
Length = 254
Score = 77.4 bits (189), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 34/69 (49%), Positives = 49/69 (71%), Gaps = 1/69 (1%)
Query: 11 GRQKVEMVKMPNESNLQVTFSKRRTGLFKKASELCTLCGADIAIIVFSPGKKVFSF-GHP 69
GR +VEM ++ N+ N QVTFSKRR GL KKA E+ LC A++++IVFS K+F +
Sbjct: 2 GRGRVEMKRIENKINRQVTFSKRRAGLLKKAHEISILCDAEVSLIVFSHKGKLFEYSSES 61
Query: 70 CVETIVDRY 78
C+E +++RY
Sbjct: 62 CMEKVLERY 70
>sp|Q6R4S3|CAL_BRARA Transcription factor CAULIFLOWER OS=Brassica rapa GN=CAL PE=2
SV=1
Length = 254
Score = 77.4 bits (189), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 34/69 (49%), Positives = 49/69 (71%), Gaps = 1/69 (1%)
Query: 11 GRQKVEMVKMPNESNLQVTFSKRRTGLFKKASELCTLCGADIAIIVFSPGKKVFSF-GHP 69
GR +VEM ++ N+ N QVTFSKRR GL KKA E+ LC A++++IVFS K+F +
Sbjct: 2 GRGRVEMKRIENKINRQVTFSKRRAGLLKKAHEISILCDAEVSLIVFSHKGKLFEYSSES 61
Query: 70 CVETIVDRY 78
C+E +++RY
Sbjct: 62 CMEKVLERY 70
>sp|Q9SBK9|CAL_BRARP Transcription factor CAULIFLOWER OS=Brassica rapa subsp.
pekinensis GN=CAL PE=2 SV=1
Length = 254
Score = 77.4 bits (189), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 34/69 (49%), Positives = 49/69 (71%), Gaps = 1/69 (1%)
Query: 11 GRQKVEMVKMPNESNLQVTFSKRRTGLFKKASELCTLCGADIAIIVFSPGKKVFSF-GHP 69
GR +VEM ++ N+ N QVTFSKRR GL KKA E+ LC A++++IVFS K+F +
Sbjct: 2 GRGRVEMKRIENKINRQVTFSKRRAGLLKKAHEISILCDAEVSLIVFSHKGKLFEYSSES 61
Query: 70 CVETIVDRY 78
C+E +++RY
Sbjct: 62 CMEKVLERY 70
>sp|Q6R4R8|CALB_BRAOB Truncated transcription factor CAULIFLOWER B OS=Brassica oleracea
var. botrytis GN=CAL-B PE=2 SV=1
Length = 150
Score = 77.4 bits (189), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 34/69 (49%), Positives = 49/69 (71%), Gaps = 1/69 (1%)
Query: 11 GRQKVEMVKMPNESNLQVTFSKRRTGLFKKASELCTLCGADIAIIVFSPGKKVFSF-GHP 69
GR +VEM ++ N+ N QVTFSKRR GL KKA E+ LC A++++IVFS K+F +
Sbjct: 2 GRGRVEMKRIENKINRQVTFSKRRAGLLKKAHEVSILCDAEVSLIVFSHKGKLFEYSSES 61
Query: 70 CVETIVDRY 78
C+E +++RY
Sbjct: 62 CMEKVLERY 70
>sp|Q40702|MADS2_ORYSJ MADS-box transcription factor 2 OS=Oryza sativa subsp. japonica
GN=MADS2 PE=2 SV=1
Length = 209
Score = 77.0 bits (188), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 40/121 (33%), Positives = 71/121 (58%), Gaps = 7/121 (5%)
Query: 11 GRQKVEMVKMPNESNLQVTFSKRRTGLFKKASELCTLCGADIAIIVFSPGKKVFSFGHP- 69
GR K+E+ ++ N +N QVTFSKRR+G+ KKA E+ LC A++ +++FS K++ + P
Sbjct: 2 GRGKIEIKRIENSTNRQVTFSKRRSGILKKAREISVLCDAEVGVVIFSSAGKLYDYCSPK 61
Query: 70 -CVETIVDRYLTRNPPQISGTMQLIEAHRNASVRELNMQLTQVLNQLEIEKKRGEELNQM 128
+ I+++Y T SG + E H++ S ++ Q+E+ +GE+LN +
Sbjct: 62 TSLSRILEKYQTN-----SGKILWDEKHKSLSAEIDRIKKENDNMQIELRHLKGEDLNSL 116
Query: 129 R 129
+
Sbjct: 117 Q 117
>sp|O64645|SOC1_ARATH MADS-box protein SOC1 OS=Arabidopsis thaliana GN=SOC1 PE=1 SV=1
Length = 214
Score = 77.0 bits (188), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 33/76 (43%), Positives = 50/76 (65%)
Query: 12 RQKVEMVKMPNESNLQVTFSKRRTGLFKKASELCTLCGADIAIIVFSPGKKVFSFGHPCV 71
R K +M ++ N ++ QVTFSKRR GL KKA EL LC A++++I+FSP K++ F +
Sbjct: 3 RGKTQMKRIENATSRQVTFSKRRNGLLKKAFELSVLCDAEVSLIIFSPKGKLYEFASSNM 62
Query: 72 ETIVDRYLTRNPPQIS 87
+ +DRYL ++S
Sbjct: 63 QDTIDRYLRHTKDRVS 78
>sp|P35632|AP3_ARATH Floral homeotic protein APETALA 3 OS=Arabidopsis thaliana GN=AP3
PE=1 SV=1
Length = 232
Score = 76.6 bits (187), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 44/122 (36%), Positives = 71/122 (58%), Gaps = 12/122 (9%)
Query: 11 GRQKVEMVKMPNESNLQVTFSKRRTGLFKKASELCTLCGADIAIIVFSPGKKVFSFGHPC 70
R K+++ ++ N++N QVT+SKRR GLFKKA EL LC A ++II+FS K+ + P
Sbjct: 2 ARGKIQIKRIENQTNRQVTYSKRRNGLFKKAHELTVLCDARVSIIMFSSSNKLHEYISPN 61
Query: 71 VET--IVDRYLTRNPPQISGTM---------QLIEAHRNASVRELNMQLTQVLNQLEIEK 119
T IVD Y T + + T +L+E +RN ++ +L + L++L+I++
Sbjct: 62 TTTKEIVDLYQTISDVDVWATQYERMQETKRKLLETNRNLRT-QIKQRLGECLDELDIQE 120
Query: 120 KR 121
R
Sbjct: 121 LR 122
>sp|Q6R4R6|CALD_BRAOB Truncated transcription factor CAULIFLOWER D OS=Brassica oleracea
var. botrytis GN=CAL-D PE=2 SV=1
Length = 148
Score = 76.6 bits (187), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 34/69 (49%), Positives = 49/69 (71%), Gaps = 1/69 (1%)
Query: 11 GRQKVEMVKMPNESNLQVTFSKRRTGLFKKASELCTLCGADIAIIVFSPGKKVFSF-GHP 69
GR +VEM ++ N+ N QVTFSKRR GL KKA E+ LC A++++IVFS K+F +
Sbjct: 2 GRGRVEMKRIENKINRQVTFSKRRAGLLKKAHEISILCDAEVSLIVFSHKGKLFEYSSES 61
Query: 70 CVETIVDRY 78
C+E +++RY
Sbjct: 62 CMEKVLERY 70
>sp|Q38876|AGL8_ARATH Agamous-like MADS-box protein AGL8 OS=Arabidopsis thaliana
GN=AGL8 PE=1 SV=1
Length = 242
Score = 76.6 bits (187), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 34/69 (49%), Positives = 50/69 (72%), Gaps = 1/69 (1%)
Query: 11 GRQKVEMVKMPNESNLQVTFSKRRTGLFKKASELCTLCGADIAIIVFSPGKKVFSFG-HP 69
GR +V++ ++ N+ N QVTFSKRR+GL KKA E+ LC A++A+IVFS K+F +
Sbjct: 2 GRGRVQLKRIENKINRQVTFSKRRSGLLKKAHEISVLCDAEVALIVFSSKGKLFEYSTDS 61
Query: 70 CVETIVDRY 78
C+E I++RY
Sbjct: 62 CMERILERY 70
>sp|Q6R4R7|CALC_BRAOB Truncated transcription factor CAULIFLOWER C OS=Brassica oleracea
var. botrytis GN=CAL-C PE=2 SV=1
Length = 148
Score = 76.6 bits (187), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 34/69 (49%), Positives = 49/69 (71%), Gaps = 1/69 (1%)
Query: 11 GRQKVEMVKMPNESNLQVTFSKRRTGLFKKASELCTLCGADIAIIVFSPGKKVFSF-GHP 69
GR +VEM ++ N+ N QVTFSKRR GL KKA E+ LC A++++IVFS K+F +
Sbjct: 2 GRGRVEMKRIENKINRQVTFSKRRAGLLKKAHEISILCDAEVSLIVFSHKGKLFEYSSES 61
Query: 70 CVETIVDRY 78
C+E +++RY
Sbjct: 62 CMEKVLERY 70
>sp|Q41276|AP1_SINAL Floral homeotic protein APETALA 1 OS=Sinapis alba GN=AP1 PE=2
SV=1
Length = 254
Score = 76.3 bits (186), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 33/69 (47%), Positives = 49/69 (71%), Gaps = 1/69 (1%)
Query: 11 GRQKVEMVKMPNESNLQVTFSKRRTGLFKKASELCTLCGADIAIIVFSPGKKVFSFG-HP 69
GR +V++ ++ N+ N QVTFSKRR GL KKA E+ LC A++A++VFS K+F +
Sbjct: 2 GRGRVQLKRIENKINRQVTFSKRRAGLLKKAHEISVLCDAEVALVVFSHKGKLFEYSTDS 61
Query: 70 CVETIVDRY 78
C+E I++RY
Sbjct: 62 CMEKILERY 70
>sp|Q40170|AGL8_SOLLC Agamous-like MADS-box protein AGL8 homolog OS=Solanum
lycopersicum GN=TDR4 PE=2 SV=1
Length = 227
Score = 76.3 bits (186), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 33/69 (47%), Positives = 50/69 (72%), Gaps = 1/69 (1%)
Query: 11 GRQKVEMVKMPNESNLQVTFSKRRTGLFKKASELCTLCGADIAIIVFSPGKKVFSFGHP- 69
GR +V++ ++ N+ N QVTFSKRR+GL KKA E+ LC A++ +IVFS K+F + +
Sbjct: 2 GRGRVQLKRIENKINRQVTFSKRRSGLLKKAHEISVLCDAEVGLIVFSTKGKLFEYANDS 61
Query: 70 CVETIVDRY 78
C+E I++RY
Sbjct: 62 CMERILERY 70
>sp|D7KWY6|AP1_ARALL Floral homeotic protein APETALA 1 OS=Arabidopsis lyrata subsp.
lyrata GN=AP1 PE=3 SV=1
Length = 256
Score = 76.3 bits (186), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 33/69 (47%), Positives = 49/69 (71%), Gaps = 1/69 (1%)
Query: 11 GRQKVEMVKMPNESNLQVTFSKRRTGLFKKASELCTLCGADIAIIVFSPGKKVFSFG-HP 69
GR +V++ ++ N+ N QVTFSKRR GL KKA E+ LC A++A++VFS K+F +
Sbjct: 2 GRGRVQLKRIENKINRQVTFSKRRAGLLKKAHEISVLCDAEVALVVFSHKGKLFEYSTDS 61
Query: 70 CVETIVDRY 78
C+E I++RY
Sbjct: 62 CMEKILERY 70
>sp|Q8GTF5|AP1A_BRAOB Floral homeotic protein APETALA 1 A OS=Brassica oleracea var.
botrytis GN=AP1A PE=2 SV=1
Length = 256
Score = 75.9 bits (185), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 33/69 (47%), Positives = 49/69 (71%), Gaps = 1/69 (1%)
Query: 11 GRQKVEMVKMPNESNLQVTFSKRRTGLFKKASELCTLCGADIAIIVFSPGKKVFSFG-HP 69
GR +V++ ++ N+ N QVTFSKRR GL KKA E+ LC A++A++VFS K+F +
Sbjct: 2 GRGRVQLKRIENKINRQVTFSKRRAGLMKKAHEISVLCDAEVALVVFSHKGKLFEYSTDS 61
Query: 70 CVETIVDRY 78
C+E I++RY
Sbjct: 62 CMEKILERY 70
>sp|B4YPW6|AP1A_BRAOA Floral homeotic protein APETALA 1 A OS=Brassica oleracea var.
alboglabra GN=AP1A PE=3 SV=1
Length = 256
Score = 75.9 bits (185), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 33/69 (47%), Positives = 49/69 (71%), Gaps = 1/69 (1%)
Query: 11 GRQKVEMVKMPNESNLQVTFSKRRTGLFKKASELCTLCGADIAIIVFSPGKKVFSFG-HP 69
GR +V++ ++ N+ N QVTFSKRR GL KKA E+ LC A++A++VFS K+F +
Sbjct: 2 GRGRVQLKRIENKINRQVTFSKRRAGLMKKAHEISVLCDAEVALVVFSHKGKLFEYSTDS 61
Query: 70 CVETIVDRY 78
C+E I++RY
Sbjct: 62 CMEKILERY 70
>sp|Q96356|2AP1_BRAOT Floral homeotic protein APETALA 1-2 OS=Brassica oleracea var.
italica GN=2AP1 PE=2 SV=1
Length = 256
Score = 75.9 bits (185), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 33/69 (47%), Positives = 49/69 (71%), Gaps = 1/69 (1%)
Query: 11 GRQKVEMVKMPNESNLQVTFSKRRTGLFKKASELCTLCGADIAIIVFSPGKKVFSFG-HP 69
GR +V++ ++ N+ N QVTFSKRR GL KKA E+ LC A++A++VFS K+F +
Sbjct: 2 GRGRVQLKRIENKINRQVTFSKRRAGLMKKAHEISVLCDAEVALVVFSHKGKLFEYSTDS 61
Query: 70 CVETIVDRY 78
C+E I++RY
Sbjct: 62 CMEKILERY 70
>sp|Q0D4T4|MAD18_ORYSJ MADS-box transcription factor 18 OS=Oryza sativa subsp. japonica
GN=MADS18 PE=1 SV=1
Length = 249
Score = 75.9 bits (185), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 35/69 (50%), Positives = 48/69 (69%), Gaps = 1/69 (1%)
Query: 11 GRQKVEMVKMPNESNLQVTFSKRRTGLFKKASELCTLCGADIAIIVFSPGKKVFSF-GHP 69
GR V++ ++ N+ N QVTFSKRR GL KKA E+ LC AD+A+IVFS K++ F H
Sbjct: 2 GRGPVQLRRIENKINRQVTFSKRRNGLLKKAHEISVLCDADVALIVFSTKGKLYEFSSHS 61
Query: 70 CVETIVDRY 78
+E I++RY
Sbjct: 62 SMEGILERY 70
>sp|A2YNI2|MAD18_ORYSI MADS-box transcription factor 18 OS=Oryza sativa subsp. indica
GN=MADS18 PE=2 SV=2
Length = 249
Score = 75.9 bits (185), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 35/69 (50%), Positives = 48/69 (69%), Gaps = 1/69 (1%)
Query: 11 GRQKVEMVKMPNESNLQVTFSKRRTGLFKKASELCTLCGADIAIIVFSPGKKVFSF-GHP 69
GR V++ ++ N+ N QVTFSKRR GL KKA E+ LC AD+A+IVFS K++ F H
Sbjct: 2 GRGPVQLRRIENKINRQVTFSKRRNGLLKKAHEISVLCDADVALIVFSTKGKLYEFSSHS 61
Query: 70 CVETIVDRY 78
+E I++RY
Sbjct: 62 SMEGILERY 70
>sp|Q40885|AG_PETHY Floral homeotic protein AGAMOUS OS=Petunia hybrida GN=AG1 PE=1
SV=1
Length = 242
Score = 75.9 bits (185), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 32/75 (42%), Positives = 51/75 (68%)
Query: 4 MSSKKSKGRQKVEMVKMPNESNLQVTFSKRRTGLFKKASELCTLCGADIAIIVFSPGKKV 63
+S ++ GR K+E+ ++ N +N QVTF KRR GL KKA EL LC A++A+IVFS ++
Sbjct: 11 ISPQRKLGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRL 70
Query: 64 FSFGHPCVETIVDRY 78
+ + + V+ ++RY
Sbjct: 71 YEYANNSVKATIERY 85
>sp|A2ICN5|MEF2A_PIG Myocyte-specific enhancer factor 2A OS=Sus scrofa GN=MEF2A PE=2
SV=2
Length = 507
Score = 75.9 bits (185), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 42/126 (33%), Positives = 69/126 (54%), Gaps = 6/126 (4%)
Query: 11 GRQKVEMVKMPNESNLQVTFSKRRTGLFKKASELCTLCGADIAIIVFSPGKKVFSFGHPC 70
GR+K+++ ++ +E N QVTF+KR+ GL KKA EL LC +IA+I+F+ K+F +
Sbjct: 2 GRKKIQITRIMDERNRQVTFTKRKFGLMKKAYELSVLCDCEIALIIFNSSNKLFQYASTD 61
Query: 71 VETIVDRYLTRNPPQISGT-MQLIEA-----HRNASVRELNMQLTQVLNQLEIEKKRGEE 124
++ ++ +Y N P SGT ++EA HR + + + E KK EE
Sbjct: 62 MDKVLLKYTEYNEPHESGTNSDIVEALNKKEHRGCDSPDPDTSYVLTPHTEEKYKKINEE 121
Query: 125 LNQMRK 130
+ M +
Sbjct: 122 FDNMMR 127
>sp|Q6EU39|MADS6_ORYSJ MADS-box transcription factor 6 OS=Oryza sativa subsp. japonica
GN=MADS6 PE=1 SV=1
Length = 250
Score = 75.9 bits (185), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 33/68 (48%), Positives = 47/68 (69%)
Query: 11 GRQKVEMVKMPNESNLQVTFSKRRTGLFKKASELCTLCGADIAIIVFSPGKKVFSFGHPC 70
GR +VE+ ++ N+ N QVTFSKRR GL KKA EL LC A++A+I+FS K++ FG
Sbjct: 2 GRGRVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEFGSAG 61
Query: 71 VETIVDRY 78
+ ++RY
Sbjct: 62 ITKTLERY 69
>sp|Q43585|AG_TOBAC Floral homeotic protein AGAMOUS OS=Nicotiana tabacum GN=AG1 PE=2
SV=1
Length = 248
Score = 75.9 bits (185), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 32/75 (42%), Positives = 51/75 (68%)
Query: 4 MSSKKSKGRQKVEMVKMPNESNLQVTFSKRRTGLFKKASELCTLCGADIAIIVFSPGKKV 63
+S ++ GR K+E+ ++ N +N QVTF KRR GL KKA EL LC A++A+IVFS ++
Sbjct: 11 ISPQRKLGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRL 70
Query: 64 FSFGHPCVETIVDRY 78
+ + + V+ ++RY
Sbjct: 71 YEYANNSVKATIERY 85
>sp|Q42429|AGL8_SOLTU Agamous-like MADS-box protein AGL8 homolog OS=Solanum tuberosum
PE=2 SV=1
Length = 250
Score = 75.9 bits (185), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 32/69 (46%), Positives = 50/69 (72%), Gaps = 1/69 (1%)
Query: 11 GRQKVEMVKMPNESNLQVTFSKRRTGLFKKASELCTLCGADIAIIVFSPGKKVFSFGHP- 69
GR +V++ ++ N+ N QVTFSKRR+GL KKA E+ LC A++ +IVFS K+F + +
Sbjct: 2 GRGRVQLKRIENKINRQVTFSKRRSGLLKKAHEISVLCDAEVGLIVFSTKGKLFEYANDS 61
Query: 70 CVETIVDRY 78
C+E +++RY
Sbjct: 62 CMERLLERY 70
>sp|Q41274|AGL8_SINAL Agamous-like MADS-box protein AGL8 homolog OS=Sinapis alba
GN=AGL8 PE=2 SV=1
Length = 241
Score = 75.9 bits (185), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 32/69 (46%), Positives = 50/69 (72%), Gaps = 1/69 (1%)
Query: 11 GRQKVEMVKMPNESNLQVTFSKRRTGLFKKASELCTLCGADIAIIVFSPGKKVFSFG-HP 69
GR +V++ ++ N+ N QVTFSKRR+GL KKA E+ LC A++A+++FS K+F +
Sbjct: 2 GRGRVQLKRIENKINRQVTFSKRRSGLLKKAHEISVLCDAEVALVIFSSKGKLFEYSTDS 61
Query: 70 CVETIVDRY 78
C+E I++RY
Sbjct: 62 CMEKILERY 70
>sp|P35631|AP1_ARATH Floral homeotic protein APETALA 1 OS=Arabidopsis thaliana GN=AP1
PE=1 SV=2
Length = 256
Score = 75.5 bits (184), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 33/69 (47%), Positives = 49/69 (71%), Gaps = 1/69 (1%)
Query: 11 GRQKVEMVKMPNESNLQVTFSKRRTGLFKKASELCTLCGADIAIIVFSPGKKVFSFG-HP 69
GR +V++ ++ N+ N QVTFSKRR GL KKA E+ LC A++A++VFS K+F +
Sbjct: 2 GRGRVQLKRIENKINRQVTFSKRRAGLLKKAHEISVLCDAEVALVVFSHKGKLFEYSTDS 61
Query: 70 CVETIVDRY 78
C+E I++RY
Sbjct: 62 CMEKILERY 70
>sp|P29385|AGL5_ARATH Agamous-like MADS-box protein AGL5 OS=Arabidopsis thaliana
GN=AGL5 PE=1 SV=1
Length = 246
Score = 75.5 bits (184), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 35/87 (40%), Positives = 53/87 (60%), Gaps = 5/87 (5%)
Query: 6 SKKSKGRQKVEMVKMPNESNLQVTFSKRRTGLFKKASELCTLCGADIAIIVFSPGKKVFS 65
S K GR K+E+ ++ N +N QVTF KRR GL KKA EL LC A++A+++FS +++
Sbjct: 12 SSKKIGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALVIFSTRGRLYE 71
Query: 66 FGHPCVETIVDRYLTR-----NPPQIS 87
+ + V ++RY NPP I+
Sbjct: 72 YANNSVRGTIERYKKACSDAVNPPTIT 98
>sp|O22328|AGL8_SOLCO Agamous-like MADS-box protein AGL8 homolog OS=Solanum commersonii
GN=SCM1 PE=2 SV=1
Length = 250
Score = 75.5 bits (184), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 32/69 (46%), Positives = 49/69 (71%), Gaps = 1/69 (1%)
Query: 11 GRQKVEMVKMPNESNLQVTFSKRRTGLFKKASELCTLCGADIAIIVFSPGKKVFSFG-HP 69
GR +V++ ++ N+ N QVTFSKRR+GL KKA E+ LC A++ +IVFS K+F +
Sbjct: 2 GRGRVQLKRIENKINRQVTFSKRRSGLLKKAHEISVLCDAEVGLIVFSTKGKLFEYATDS 61
Query: 70 CVETIVDRY 78
C+E +++RY
Sbjct: 62 CMERLLERY 70
>sp|O82794|AGL24_ARATH MADS-box protein AGL24 OS=Arabidopsis thaliana GN=AGL24 PE=1 SV=1
Length = 220
Score = 75.5 bits (184), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 45/121 (37%), Positives = 69/121 (57%), Gaps = 10/121 (8%)
Query: 11 GRQKVEMVKMPNESNLQVTFSKRRTGLFKKASELCTLCGADIAIIVFSPGKKVFSFGHPC 70
R+K+ + K+ N + QVTFSKRR G+FKKA EL LC AD+A+I+FS K+F F
Sbjct: 2 AREKIRIKKIDNITARQVTFSKRRRGIFKKADELSVLCDADVALIIFSATGKLFEFSSSR 61
Query: 71 VETIVDRYLTRNPPQISGTMQLIEAHRNASVRELNMQLTQVLNQLE-----IEKKRGEEL 125
+ I+ RY + + I+ M H +R N L+++ ++E + K RGE+L
Sbjct: 62 MRDILGRY-SLHASNINKLMDPPSTH----LRLENCNLSRLSKEVEDKTKQLRKLRGEDL 116
Query: 126 N 126
+
Sbjct: 117 D 117
>sp|Q01540|AG_BRANA Floral homeotic protein AGAMOUS OS=Brassica napus GN=AG1 PE=2
SV=1
Length = 252
Score = 75.1 bits (183), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 34/79 (43%), Positives = 53/79 (67%), Gaps = 1/79 (1%)
Query: 1 MSGMSS-KKSKGRQKVEMVKMPNESNLQVTFSKRRTGLFKKASELCTLCGADIAIIVFSP 59
+ G SS ++ GR K+E+ ++ N +N QVTF KRR GL KKA EL LC A++A+IVFS
Sbjct: 7 LGGESSPQRKAGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSS 66
Query: 60 GKKVFSFGHPCVETIVDRY 78
+++ + + V+ ++RY
Sbjct: 67 RGRLYEYSNNSVKGTIERY 85
>sp|D7KQR8|CAL_ARALL Transcription factor CAULIFLOWER OS=Arabidopsis lyrata subsp.
lyrata GN=CAL PE=3 SV=1
Length = 256
Score = 75.1 bits (183), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 32/69 (46%), Positives = 49/69 (71%), Gaps = 1/69 (1%)
Query: 11 GRQKVEMVKMPNESNLQVTFSKRRTGLFKKASELCTLCGADIAIIVFSPGKKVFSF-GHP 69
GR +V++ ++ N+ N QVTFSKRR GL KKA E+ LC A++++IVFS K+F +
Sbjct: 2 GRGRVQLKRIENKINRQVTFSKRRAGLLKKAQEISVLCDAEVSLIVFSHKGKLFEYTSES 61
Query: 70 CVETIVDRY 78
C+E +++RY
Sbjct: 62 CMEKVLERY 70
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.315 0.131 0.383
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 85,131,761
Number of Sequences: 539616
Number of extensions: 3411546
Number of successful extensions: 12250
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 174
Number of HSP's successfully gapped in prelim test: 48
Number of HSP's that attempted gapping in prelim test: 12038
Number of HSP's gapped (non-prelim): 255
length of query: 225
length of database: 191,569,459
effective HSP length: 113
effective length of query: 112
effective length of database: 130,592,851
effective search space: 14626399312
effective search space used: 14626399312
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 59 (27.3 bits)