Query 039657
Match_columns 507
No_of_seqs 486 out of 2811
Neff 8.0
Searched_HMMs 29240
Date Mon Mar 25 20:36:15 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/039657.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/039657hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1yyh_A HN1;, notch 1, ankyrin 99.9 2.4E-26 8.3E-31 223.4 11.9 135 164-333 86-234 (253)
2 1oy3_D Transcription factor in 99.9 5.6E-26 1.9E-30 222.6 13.5 206 1-334 1-270 (282)
3 1k1a_A B-cell lymphoma 3-encod 99.9 6.7E-25 2.3E-29 210.1 14.9 133 165-333 76-227 (241)
4 3b7b_A Euchromatic histone-lys 99.9 1.1E-24 3.8E-29 208.4 14.4 204 2-333 4-221 (237)
5 1n11_A Ankyrin; clathrin, BAND 99.9 5.2E-25 1.8E-29 230.6 13.1 148 163-333 207-388 (437)
6 4b93_B Ankyrin repeat domain-c 99.9 3E-25 1E-29 218.8 8.7 135 162-332 80-228 (269)
7 1n11_A Ankyrin; clathrin, BAND 99.9 5.6E-24 1.9E-28 222.8 14.3 150 160-332 171-354 (437)
8 3utm_A Tankyrase-1; tankyrase, 99.9 6.4E-24 2.2E-28 214.1 14.2 207 2-337 51-328 (351)
9 3d9h_A CDNA FLJ77766, highly s 99.9 7.9E-24 2.7E-28 209.8 13.7 199 2-331 52-264 (285)
10 2dzn_A Probable 26S proteasome 99.9 1.4E-23 4.9E-28 199.3 14.6 134 165-332 69-218 (228)
11 3aji_A 26S proteasome non-ATPa 99.9 5.1E-24 1.8E-28 203.0 11.3 135 164-334 69-217 (231)
12 2xai_A ASB-9, ankyrin repeat a 99.9 1.2E-23 4.2E-28 205.4 13.7 132 163-332 64-209 (261)
13 1ikn_D Protein (I-kappa-B-alph 99.9 1.2E-23 4E-28 201.7 11.8 136 164-332 74-229 (236)
14 2fo1_E LIN-12 protein; beta-ba 99.9 2.4E-23 8.3E-28 214.3 14.6 133 165-332 196-356 (373)
15 1wdy_A 2-5A-dependent ribonucl 99.9 2.9E-23 1E-27 202.8 14.3 147 165-333 69-264 (285)
16 1s70_B 130 kDa myosin-binding 99.9 5.1E-24 1.8E-28 211.1 8.9 136 164-335 102-278 (299)
17 2f8y_A Notch homolog 1, transl 99.9 2.9E-23 9.8E-28 196.7 13.1 134 165-333 55-202 (223)
18 4gpm_A Engineered protein OR26 99.9 4.4E-23 1.5E-27 189.1 12.3 109 162-288 31-153 (169)
19 3ljn_A Hypothetical protein; a 99.9 1.7E-23 5.7E-28 214.0 10.0 206 2-333 13-255 (364)
20 2xai_A ASB-9, ankyrin repeat a 99.9 4.3E-23 1.5E-27 201.5 12.2 132 166-332 99-248 (261)
21 1sw6_A Regulatory protein SWI6 99.9 1.8E-23 6E-28 211.6 9.5 143 164-331 127-325 (327)
22 2rfm_A Putative ankyrin repeat 99.9 5E-23 1.7E-27 191.2 10.8 106 165-288 65-184 (192)
23 4g8k_A 2-5A-dependent ribonucl 99.9 1.1E-22 3.8E-27 205.6 13.6 146 166-332 57-283 (337)
24 1yyh_A HN1;, notch 1, ankyrin 99.9 2E-22 6.8E-27 195.7 13.5 108 163-288 119-240 (253)
25 2rfa_A Transient receptor pote 99.9 1.2E-21 4.2E-26 186.8 15.7 116 163-288 70-214 (232)
26 4gpm_A Engineered protein OR26 99.9 1.6E-22 5.6E-27 185.4 9.0 128 170-333 6-147 (169)
27 3eu9_A Huntingtin-interacting 99.9 5.7E-22 1.9E-26 188.8 13.0 132 166-333 74-221 (240)
28 1k1a_A B-cell lymphoma 3-encod 99.9 3.1E-22 1.1E-26 191.5 10.2 110 161-288 109-233 (241)
29 4b93_B Ankyrin repeat domain-c 99.9 3.7E-22 1.3E-26 196.6 10.7 101 165-283 116-230 (269)
30 3b7b_A Euchromatic histone-lys 99.9 1.4E-21 4.7E-26 186.9 14.1 104 164-285 107-224 (237)
31 4g8k_A 2-5A-dependent ribonucl 99.9 8.8E-22 3E-26 199.0 13.4 214 2-288 51-290 (337)
32 3kea_A K1L; tropism, ANK repea 99.9 2.4E-22 8.3E-27 199.2 8.6 174 2-288 24-212 (285)
33 3ljn_A Hypothetical protein; a 99.9 6.1E-22 2.1E-26 202.3 10.6 109 162-288 132-261 (364)
34 1wdy_A 2-5A-dependent ribonucl 99.9 5.9E-21 2E-25 186.4 16.9 107 165-288 145-270 (285)
35 2dzn_A Probable 26S proteasome 99.9 9E-22 3.1E-26 186.8 10.1 102 163-282 102-219 (228)
36 2etb_A Transient receptor pote 99.8 3.6E-21 1.2E-25 186.7 13.4 114 164-288 86-238 (256)
37 3v31_A Ankyrin repeat family A 99.8 3.5E-21 1.2E-25 174.4 12.4 108 163-288 31-152 (167)
38 3hra_A Ankyrin repeat family p 99.8 6.4E-21 2.2E-25 177.5 14.1 108 164-288 68-195 (201)
39 2fo1_E LIN-12 protein; beta-ba 99.8 2.2E-21 7.6E-26 199.7 11.8 180 2-288 159-363 (373)
40 3eu9_A Huntingtin-interacting 99.8 7.7E-21 2.6E-25 181.0 14.4 109 162-288 103-227 (240)
41 1oy3_D Transcription factor in 99.8 3E-21 1E-25 188.8 11.8 107 160-284 150-271 (282)
42 3hra_A Ankyrin repeat family p 99.8 3.9E-21 1.3E-25 179.0 11.9 137 162-333 33-189 (201)
43 4hbd_A KN motif and ankyrin re 99.8 2.3E-21 8E-26 191.3 9.9 105 167-288 144-267 (276)
44 2rfa_A Transient receptor pote 99.8 3.7E-21 1.3E-25 183.5 10.9 144 162-333 31-208 (232)
45 2rfm_A Putative ankyrin repeat 99.8 1.3E-21 4.4E-26 181.6 7.2 137 161-333 28-178 (192)
46 1sw6_A Regulatory protein SWI6 99.8 2E-21 6.7E-26 196.6 9.0 174 2-282 123-327 (327)
47 2pnn_A Transient receptor pote 99.8 2.2E-21 7.6E-26 190.1 9.1 114 164-288 97-250 (273)
48 3utm_A Tankyrase-1; tankyrase, 99.8 5.7E-21 1.9E-25 192.4 12.3 148 162-332 52-290 (351)
49 3jxi_A Vanilloid receptor-rela 99.8 3.9E-21 1.3E-25 186.7 10.4 115 163-288 88-242 (260)
50 3twr_A Tankyrase-2; ankyrin re 99.8 2.2E-21 7.4E-26 175.4 7.9 138 165-337 5-156 (165)
51 2f8y_A Notch homolog 1, transl 99.8 1.6E-20 5.5E-25 177.7 13.4 107 164-288 88-208 (223)
52 3d9h_A CDNA FLJ77766, highly s 99.8 1.3E-20 4.3E-25 186.7 12.4 149 161-333 52-233 (285)
53 3aji_A 26S proteasome non-ATPa 99.8 6.9E-21 2.3E-25 181.3 9.8 175 2-287 33-221 (231)
54 2vge_A RELA-associated inhibit 99.8 3.2E-21 1.1E-25 185.3 7.3 131 165-332 51-198 (229)
55 4hbd_A KN motif and ankyrin re 99.8 7.1E-21 2.4E-25 187.8 9.9 139 161-333 104-261 (276)
56 1ikn_D Protein (I-kappa-B-alph 99.8 8.5E-21 2.9E-25 181.8 10.2 137 161-333 38-195 (236)
57 3v31_A Ankyrin repeat family A 99.8 8E-21 2.7E-25 172.0 8.1 131 167-333 2-146 (167)
58 2y1l_E Darpin-8.4; hydrolase-i 99.8 3.7E-20 1.3E-24 168.4 12.5 106 164-287 43-162 (169)
59 3v30_A DNA-binding protein rfx 99.8 1.6E-20 5.6E-25 170.8 9.6 108 163-288 31-152 (172)
60 1awc_B Protein (GA binding pro 99.8 3.8E-20 1.3E-24 165.4 11.9 105 165-287 31-149 (153)
61 1ihb_A P18-INK4C(INK6), cyclin 99.8 2E-20 6.7E-25 168.3 9.9 107 164-288 34-154 (162)
62 2etb_A Transient receptor pote 99.8 6.8E-21 2.3E-25 184.7 5.8 144 165-333 40-232 (256)
63 3v30_A DNA-binding protein rfx 99.8 2.2E-20 7.7E-25 169.9 8.5 131 168-333 2-146 (172)
64 1d9s_A Cyclin-dependent kinase 99.8 1.3E-20 4.6E-25 165.2 6.3 110 160-288 4-128 (136)
65 3f6q_A Integrin-linked protein 99.8 3.6E-20 1.2E-24 170.0 9.4 133 166-333 3-149 (179)
66 1ycs_B 53BP2, P53BP2; ankyrin 99.8 4.8E-20 1.6E-24 177.7 10.6 139 168-333 37-192 (239)
67 3jxi_A Vanilloid receptor-rela 99.8 1.3E-20 4.6E-25 182.9 6.5 150 165-333 43-236 (260)
68 1bi7_B P16INK4A, MTS1, multipl 99.8 1.2E-20 4.1E-25 169.5 5.4 128 163-327 7-149 (156)
69 1s70_B 130 kDa myosin-binding 99.8 8.8E-20 3E-24 180.5 11.4 148 164-333 69-243 (299)
70 2y1l_E Darpin-8.4; hydrolase-i 99.8 4.2E-20 1.4E-24 168.1 7.9 133 165-333 11-157 (169)
71 1awc_B Protein (GA binding pro 99.8 4.4E-20 1.5E-24 164.9 7.2 129 168-333 2-144 (153)
72 1ihb_A P18-INK4C(INK6), cyclin 99.8 3.5E-20 1.2E-24 166.6 6.4 131 167-333 4-148 (162)
73 1bd8_A P19INK4D CDK4/6 inhibit 99.8 1.5E-19 5.2E-24 161.5 10.5 106 163-288 31-150 (156)
74 1bd8_A P19INK4D CDK4/6 inhibit 99.8 9.2E-20 3.1E-24 162.9 7.8 129 168-333 2-144 (156)
75 2jab_A H10-2-G3; HER2, darpin, 99.8 1.4E-19 4.7E-24 158.7 7.1 105 165-287 11-129 (136)
76 3c5r_A BARD-1, BRCA1-associate 99.8 7.4E-20 2.5E-24 160.4 5.2 106 164-287 6-125 (137)
77 3kea_A K1L; tropism, ANK repea 99.8 9.3E-20 3.2E-24 180.6 6.4 110 158-287 21-145 (285)
78 3twr_A Tankyrase-2; ankyrin re 99.8 3.5E-19 1.2E-23 160.8 8.8 104 165-287 39-156 (165)
79 3f6q_A Integrin-linked protein 99.8 4.6E-19 1.6E-23 162.6 8.8 107 163-287 34-154 (179)
80 1d9s_A Cyclin-dependent kinase 99.8 4.7E-19 1.6E-23 155.3 8.1 81 164-246 41-136 (136)
81 1n0r_A 4ANK, 4 ankyrin repeats 99.8 9.1E-19 3.1E-23 149.8 9.5 104 167-288 1-118 (126)
82 3aaa_C Myotrophin, protein V-1 99.8 2.2E-19 7.5E-24 154.5 5.6 100 165-282 4-117 (123)
83 2vge_A RELA-associated inhibit 99.8 1.7E-19 5.8E-24 173.2 2.8 131 165-331 18-165 (229)
84 1bi7_B P16INK4A, MTS1, multipl 99.8 6.7E-19 2.3E-23 158.0 6.5 95 165-278 42-151 (156)
85 2pnn_A Transient receptor pote 99.7 5.9E-19 2E-23 172.8 6.5 149 164-333 50-244 (273)
86 3t8k_A Uncharacterized protein 99.7 6.7E-19 2.3E-23 163.7 4.6 105 166-288 36-171 (186)
87 3deo_A Signal recognition part 99.7 2.2E-18 7.5E-23 159.0 6.0 104 165-287 41-159 (183)
88 3ehr_A Osteoclast-stimulating 99.7 8.4E-19 2.9E-23 166.5 3.3 109 162-288 67-190 (222)
89 1ycs_B 53BP2, P53BP2; ankyrin 99.7 1.7E-18 5.8E-23 166.7 3.7 127 167-330 4-145 (239)
90 1n0r_A 4ANK, 4 ankyrin repeats 99.7 5.4E-17 1.9E-21 138.6 11.4 81 165-246 32-126 (126)
91 3t8k_A Uncharacterized protein 99.7 2.3E-18 7.8E-23 160.1 2.6 139 168-333 6-165 (186)
92 1n0q_A 3ANK, 3 ankyrin repeats 99.7 1.9E-17 6.6E-22 135.1 7.2 85 167-288 1-85 (93)
93 3ui2_A Signal recognition part 99.7 1.3E-17 4.6E-22 161.2 6.2 102 165-285 42-158 (244)
94 3c5r_A BARD-1, BRCA1-associate 99.7 5.4E-17 1.8E-21 142.0 7.0 78 164-242 39-130 (137)
95 3jue_A Arfgap with coiled-coil 99.7 6.3E-17 2.2E-21 166.3 7.0 134 166-332 197-347 (368)
96 2b0o_E UPLC1; arfgap, structur 99.7 9.2E-17 3.1E-21 160.6 7.7 104 167-288 150-276 (301)
97 2jab_A H10-2-G3; HER2, darpin, 99.7 4.7E-16 1.6E-20 136.0 11.0 80 163-243 42-135 (136)
98 2aja_A Ankyrin repeat family p 99.6 5.8E-18 2E-22 174.6 -1.9 143 169-333 164-360 (376)
99 2l6b_A NR1C; ankyrin, consensu 99.6 2.2E-16 7.5E-21 133.7 7.9 93 164-274 5-111 (115)
100 2b0o_E UPLC1; arfgap, structur 99.6 1.1E-16 3.8E-21 160.0 7.1 96 165-284 187-299 (301)
101 3ehr_A Osteoclast-stimulating 99.6 1.6E-16 5.6E-21 150.6 5.1 83 163-246 101-198 (222)
102 1n0q_A 3ANK, 3 ankyrin repeats 99.6 1.5E-15 5.3E-20 123.7 9.0 65 162-246 29-93 (93)
103 3aaa_C Myotrophin, protein V-1 99.6 1E-15 3.4E-20 131.3 7.4 73 163-236 35-121 (123)
104 1dcq_A PYK2-associated protein 99.6 1.3E-15 4.3E-20 150.6 9.1 104 168-288 130-255 (278)
105 2zgd_A 3 repeat synthetic anky 99.6 1.7E-15 5.7E-20 127.8 7.4 89 162-287 18-106 (110)
106 3lvq_E ARF-GAP with SH3 domain 99.6 1.9E-15 6.5E-20 161.5 9.3 103 168-288 132-257 (497)
107 3ui2_A Signal recognition part 99.6 2.5E-15 8.6E-20 145.2 8.3 74 166-243 109-182 (244)
108 3deo_A Signal recognition part 99.6 2.2E-15 7.6E-20 138.7 6.9 74 166-243 108-181 (183)
109 3jue_A Arfgap with coiled-coil 99.5 4.3E-14 1.5E-18 145.1 10.2 103 166-283 233-349 (368)
110 1dcq_A PYK2-associated protein 99.5 3.4E-14 1.1E-18 140.3 8.7 82 162-244 163-261 (278)
111 3lvq_E ARF-GAP with SH3 domain 99.5 6E-14 2E-18 149.8 10.5 81 165-246 168-265 (497)
112 2aja_A Ankyrin repeat family p 99.4 3.6E-15 1.2E-19 153.6 -3.0 106 165-288 89-216 (376)
113 2l6b_A NR1C; ankyrin, consensu 99.4 7.2E-14 2.5E-18 118.1 5.2 95 197-326 4-112 (115)
114 2zgd_A 3 repeat synthetic anky 99.4 1.1E-12 3.7E-17 110.4 8.0 58 163-240 52-109 (110)
115 1vry_A Glycine receptor alpha- 30.4 70 0.0024 24.1 4.6 40 448-487 18-57 (76)
116 4ev6_A Magnesium transport pro 28.8 62 0.0021 31.6 5.3 21 435-455 281-301 (339)
117 2iub_A CORA, divalent cation t 27.1 51 0.0017 32.6 4.4 21 435-455 305-325 (363)
118 3rko_J NADH-quinone oxidoreduc 20.9 2.5E+02 0.0087 24.8 7.2 23 433-455 52-74 (184)
119 3tlw_A GLR4197 protein, GLIC; 20.1 5.5E+02 0.019 24.2 10.5 13 355-367 209-221 (321)
No 1
>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A
Probab=99.93 E-value=2.4e-26 Score=223.41 Aligned_cols=135 Identities=9% Similarity=0.063 Sum_probs=110.7
Q ss_pred CCCCCChHHHHHHHcCCHHHHHHHhhhCCcccccccCCCCcHHHHHHHcCC--------------cccCCCCCCccchhh
Q 039657 164 GTEKMDNKILLAAKIGVTEMVDRFLKSYPAVIQELNTSEKNLVLLTFEKKN--------------AQQSGRKETPMLIAA 229 (507)
Q Consensus 164 ~d~~g~TpLh~Aa~~G~~~~v~~Ll~~~~~~~~~~d~~G~tpLh~A~~~~~--------------~~~d~~g~TpLH~Aa 229 (507)
+|..|+||||+|+..|+.++++.|++.++..++.+|.+|+||||+|+..++ +.+|.+|+||||+|+
T Consensus 86 ~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~ 165 (253)
T 1yyh_A 86 QDNMGRTPLHAAVSADAQGVFQILIRNRATDLDARMHDGTTPLILAARLAVEGMLEDLINSHADVNAVDDLGKSALHWAA 165 (253)
T ss_dssp CCTTSCCHHHHHHHHTCHHHHHHHHHSTTSCTTCCCTTCCCHHHHHHHHTCSSHHHHHHHTTCCTTCBCTTSCBHHHHHH
T ss_pred CCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCCcHHHHHHHcChHHHHHHHHHcCCCCCCcCCCCCCHHHHHH
Confidence 356789999999999999999999999884458889999999999998887 678889999999999
Q ss_pred hcCCHHHHHHHHhhCCchHHHHHHHhcccccccccccccCCCCcHHHHHHhcCCCcccccCchhhhhHHHHHHhhhhhcc
Q 039657 230 RMGVTEMVEQILDTFPANQYLQALLNRKILGESIFRQVDSQGNSALHLAAKFGDHRPWLLPGAALQMQWEIKWYQFVKKS 309 (507)
Q Consensus 230 ~~g~~~iv~~Ll~~~~~~~vv~~Ll~~~~~~~~~in~~D~~GnTpLHlAa~~g~~~~v~~~gaal~~~~el~w~~~v~~~ 309 (507)
.+|+.++|++|+++ + +.++.+|..|+||||+|+..|+.+++++ .++
T Consensus 166 ~~~~~~~v~~Ll~~-------------g----a~~~~~~~~g~tpL~~A~~~~~~~~v~~---------------Ll~-- 211 (253)
T 1yyh_A 166 AVNNVDAAVVLLKN-------------G----ANKDMQNNREETPLFLAAREGSYETAKV---------------LLD-- 211 (253)
T ss_dssp HHTCHHHHHHHHHT-------------T----CCTTCCCTTSCCHHHHHHHHTCHHHHHH---------------HHH--
T ss_pred HcCCHHHHHHHHHc-------------C----CCCCCcCCCCCCHHHHHHHCCCHHHHHH---------------HHH--
Confidence 99999966666655 3 4578999999999999999999877632 011
Q ss_pred CCccccccccCCCCCccccccccc
Q 039657 310 MPRHFFTRFNDNGKTPKEVFTETH 333 (507)
Q Consensus 310 ~~~~~~~~~N~~G~Tpldl~~~~~ 333 (507)
...+.+.+|..|+||++++.+..
T Consensus 212 -~ga~~~~~d~~g~tpl~~A~~~g 234 (253)
T 1yyh_A 212 -HFANRDITDHMDRLPRDIAQERM 234 (253)
T ss_dssp -TTCCTTCCCTTCCCHHHHHHHTT
T ss_pred -cCCCccccccCCCCHHHHHHHcC
Confidence 13356789999999999987663
No 2
>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D
Probab=99.93 E-value=5.6e-26 Score=222.64 Aligned_cols=206 Identities=12% Similarity=0.051 Sum_probs=138.3
Q ss_pred CcccccCCCCcHHHHhhcCCCcccCCCCccchhhhhhcccc---CCCCCCCCCCCCCCchhhHHHHHHHHHHHHHHHhcC
Q 039657 1 LVNSVNENGLTPLHILASKPNAFESSSRLGLFDSIIYCCID---LSKKDDGEDQLFPPNYATCVLLFKVMMKAMLIVLGL 77 (507)
Q Consensus 1 lv~~~D~~G~TPLh~lA~~p~~f~Sg~~l~~~~~~iy~~~~---v~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~ 77 (507)
+++.+|++|.||||++|+ ..+...++.++-+... ++..+ .....|
T Consensus 1 i~~~~d~~g~t~L~~A~~-------~g~~~~v~~Ll~~g~~~~~~~~~~--~~g~t~----------------------- 48 (282)
T 1oy3_D 1 VFGYVTEDGDTALHLAVI-------HQHEPFLDFLLGFSAGHEYLDLQN--DLGQTA----------------------- 48 (282)
T ss_dssp CCCCCCTTCCCHHHHHHH-------TTCHHHHHHHHHHHTTSGGGGCCC--TTSCCH-----------------------
T ss_pred CCCccCCCCCcHHHHHHH-------cCCHHHHHHHHhcCCCcccccccC--CCCCCH-----------------------
Confidence 578999999999999995 4456677777765544 22111 111111
Q ss_pred CchhhhHHHHHHHHHhhHHHHHHHHHHhhcccccccCCCCCCCCCCCCcccccccCCCCCCCCCcccccccccccccccc
Q 039657 78 GIWRINHITEKKERHTWAIQVMCELVQHASLYKYEDNGPKRRNSGPKEDEEAFSVSETLPVPDTGEISHQNKSTNHKKIE 157 (507)
Q Consensus 78 g~~~i~~i~~~k~~h~~a~~i~~~Ll~~~~~~~~~~~g~~~~~p~~~~d~~~~~~~~~~~~p~~~e~~~~~~~~~~~~~~ 157 (507)
-.++.+..| .++++.|+++++..
T Consensus 49 ------L~~A~~~g~---~~~v~~Ll~~ga~~------------------------------------------------ 71 (282)
T 1oy3_D 49 ------LHLAAILGE---ASTVEKLYAAGAGV------------------------------------------------ 71 (282)
T ss_dssp ------HHHHHHHTC---HHHHHHHHHTTCCS------------------------------------------------
T ss_pred ------HHHHHHcCC---HHHHHHHHHcCCCC------------------------------------------------
Confidence 122333344 37889999986533
Q ss_pred CCCcccCCCCCChHHHHHHHcCCHHHHHHHhhhCCcc-------------------------------------------
Q 039657 158 NGSAQSGTEKMDNKILLAAKIGVTEMVDRFLKSYPAV------------------------------------------- 194 (507)
Q Consensus 158 ~~~~~~~d~~g~TpLh~Aa~~G~~~~v~~Ll~~~~~~------------------------------------------- 194 (507)
+.+|..|.||||+|+..|+.++++.|++.+++.
T Consensus 72 ----~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 147 (282)
T 1oy3_D 72 ----LVAERGGHTALHLACRVRAHTCACVLLQPRPSHPRDASDTYLTQSQDCTPDTSHAPAAVDSQPNPENEEEPRDEDW 147 (282)
T ss_dssp ----SCCCTTSCCHHHHHTTTTCHHHHHHHSSSCCSSCCCC-----------------------------------CCCG
T ss_pred ----CCCCCCCCCHHHHHHHcCCcchhHhhhccCCCCchhhHHHHhhcccccCcchhcchhhhccccccchhhhhhhhhh
Confidence 233567999999999999999999999987651
Q ss_pred ---cccccCCCCcHHHHHHHcCC--------------cccC-CCCCCccchhhhcCCHHHHHHHHhhCCchHHHHHHHhc
Q 039657 195 ---IQELNTSEKNLVLLTFEKKN--------------AQQS-GRKETPMLIAARMGVTEMVEQILDTFPANQYLQALLNR 256 (507)
Q Consensus 195 ---~~~~d~~G~tpLh~A~~~~~--------------~~~d-~~g~TpLH~Aa~~g~~~iv~~Ll~~~~~~~vv~~Ll~~ 256 (507)
++.+|..|+||||+|+..++ +.++ ..|+||||+|+.+|+.++|++|+++
T Consensus 148 ~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~------------- 214 (282)
T 1oy3_D 148 RLQLEAENYDGHTPLHVAVIHKDAEMVRLLRDAGADLNKPEPTCGRTPLHLAVEAQAASVLELLLKA------------- 214 (282)
T ss_dssp GGGTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHT-------------
T ss_pred hhcCCCcCCCCcCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcCHHHHHHHcCCHHHHHHHHHc-------------
Confidence 36678899999999999887 4555 3499999999999999966665555
Q ss_pred ccccccccccccCCCCcHHHHHHhcCCCcccccCchhhhhHHHHHHhhhhhccCCccccccccCCCCCcccccccccc
Q 039657 257 KILGESIFRQVDSQGNSALHLAAKFGDHRPWLLPGAALQMQWEIKWYQFVKKSMPRHFFTRFNDNGKTPKEVFTETHK 334 (507)
Q Consensus 257 ~~~~~~~in~~D~~GnTpLHlAa~~g~~~~v~~~gaal~~~~el~w~~~v~~~~~~~~~~~~N~~G~Tpldl~~~~~~ 334 (507)
+ +.+|.+|..|+||||+|+..|+.+++++ .++ .+.+++.+|++|.||++.+.....
T Consensus 215 g----ad~~~~d~~g~tpL~~A~~~~~~~~v~~---------------Ll~---~ga~~~~~~~~g~tpl~~a~~~~~ 270 (282)
T 1oy3_D 215 G----ADPTARMYGGRTPLGSALLRPNPILARL---------------LRA---HGAPEPEDGGDKLSPCSSSGSDSD 270 (282)
T ss_dssp T----CCTTCCCTTSCCHHHHHHTSSCHHHHHH---------------HHH---TTCCCCCCC---------------
T ss_pred C----CCCcccccCCCCHHHHHHHcCCcHHHHH---------------HHH---cCCCcCcCCCcccccccccCCccc
Confidence 3 4579999999999999999999877632 011 244668999999999999877653
No 3
>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A
Probab=99.92 E-value=6.7e-25 Score=210.11 Aligned_cols=133 Identities=17% Similarity=0.091 Sum_probs=110.6
Q ss_pred CCCCChHHHHHHHcCCHHHHHHHhhhCC----cccccccCCCCcHHHHHHHcCC--------------cccC-CCCCCcc
Q 039657 165 TEKMDNKILLAAKIGVTEMVDRFLKSYP----AVIQELNTSEKNLVLLTFEKKN--------------AQQS-GRKETPM 225 (507)
Q Consensus 165 d~~g~TpLh~Aa~~G~~~~v~~Ll~~~~----~~~~~~d~~G~tpLh~A~~~~~--------------~~~d-~~g~TpL 225 (507)
|..|.||||+|+..|+.++++.|++.++ ++ +..|..|+||||+|+..++ +.++ ..|+|||
T Consensus 76 ~~~g~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~-~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~g~t~L 154 (241)
T 1k1a_A 76 DRHGQTAAHLACEHRSPTCLRALLDSAAPGTLDL-EARNYDGLTALHVAVNTECQETVQLLLERGADIDAVDIKSGRSPL 154 (241)
T ss_dssp CTTSCCHHHHHHHTTCHHHHHHHHHHSCTTSCCT-TCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTTCCCHH
T ss_pred CCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccc-cccCcCCCcHHHHHHHcCCHHHHHHHHHcCCCcccccccCCCcHH
Confidence 5679999999999999999999999987 54 7889999999999999887 4555 7899999
Q ss_pred chhhhcCCHHHHHHHHhhCCchHHHHHHHhcccccccccccccCCCCcHHHHHHhcCCCcccccCchhhhhHHHHHHhhh
Q 039657 226 LIAARMGVTEMVEQILDTFPANQYLQALLNRKILGESIFRQVDSQGNSALHLAAKFGDHRPWLLPGAALQMQWEIKWYQF 305 (507)
Q Consensus 226 H~Aa~~g~~~iv~~Ll~~~~~~~vv~~Ll~~~~~~~~~in~~D~~GnTpLHlAa~~g~~~~v~~~gaal~~~~el~w~~~ 305 (507)
|+|+.+|+.+++++|++++ ..+|.+|.+|+||||+|+..|+.++++. .
T Consensus 155 ~~A~~~~~~~~v~~Ll~~g-----------------~~~~~~~~~g~t~L~~A~~~~~~~~v~~---------------L 202 (241)
T 1k1a_A 155 IHAVENNSLSMVQLLLQHG-----------------ANVNAQMYSGSSALHSASGRGLLPLVRT---------------L 202 (241)
T ss_dssp HHHHHTTCHHHHHHHHHTT-----------------CCTTCBCTTSCBHHHHHHHHTCHHHHHH---------------H
T ss_pred HHHHHcCCHHHHHHHHHcC-----------------CCCCCcCCCCCCHHHHHHHcCCHHHHHH---------------H
Confidence 9999999999666666553 4578999999999999999999876531 1
Q ss_pred hhccCCccccccccCCCCCccccccccc
Q 039657 306 VKKSMPRHFFTRFNDNGKTPKEVFTETH 333 (507)
Q Consensus 306 v~~~~~~~~~~~~N~~G~Tpldl~~~~~ 333 (507)
++ .+.+.+.+|.+|+||++++.+..
T Consensus 203 l~---~ga~~~~~~~~g~tpl~~A~~~~ 227 (241)
T 1k1a_A 203 VR---SGADSSLKNCHNDTPLMVARSRR 227 (241)
T ss_dssp HH---TTCCTTCCCTTSCCTTTTCSSHH
T ss_pred Hh---cCCCCCCcCCCCCCHHHHHHhcC
Confidence 11 23456789999999999987653
No 4
>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A*
Probab=99.92 E-value=1.1e-24 Score=208.44 Aligned_cols=204 Identities=19% Similarity=0.240 Sum_probs=154.0
Q ss_pred cccccCCCCcHHHHhhcCCCcccCCCCccchhhhhhccccCCCCCCCCCCCCCCchhhHHHHHHHHHHHHHHHhcCCchh
Q 039657 2 VNSVNENGLTPLHILASKPNAFESSSRLGLFDSIIYCCIDLSKKDDGEDQLFPPNYATCVLLFKVMMKAMLIVLGLGIWR 81 (507)
Q Consensus 2 v~~~D~~G~TPLh~lA~~p~~f~Sg~~l~~~~~~iy~~~~v~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~g~~~ 81 (507)
++.+|++|.||||++|+ ......++.++-+...++..+.... .|.
T Consensus 4 ~~~~~~~g~t~L~~A~~-------~g~~~~v~~Ll~~g~~~~~~~~~g~--t~L-------------------------- 48 (237)
T 3b7b_A 4 FKMEHQNKRSPLHAAAE-------AGHVDICHMLVQAGANIDTCSEDQR--TPL-------------------------- 48 (237)
T ss_dssp CCCSSCCSCCHHHHHHH-------HTCHHHHHHHHHTTCCTTCCCTTCC--CHH--------------------------
T ss_pred cccccCCCCCHHHHHHH-------cCcHHHHHHHHHcCCCcCccCCCCC--CHH--------------------------
Confidence 47789999999999995 3456677777777665544331111 111
Q ss_pred hhHHHHHHHHHhhHHHHHHHHHHhhcccccccCCCCCCCCCCCCcccccccCCCCCCCCCccccccccccccccccCCCc
Q 039657 82 INHITEKKERHTWAIQVMCELVQHASLYKYEDNGPKRRNSGPKEDEEAFSVSETLPVPDTGEISHQNKSTNHKKIENGSA 161 (507)
Q Consensus 82 i~~i~~~k~~h~~a~~i~~~Ll~~~~~~~~~~~g~~~~~p~~~~d~~~~~~~~~~~~p~~~e~~~~~~~~~~~~~~~~~~ 161 (507)
.++.+..| .++++.|++++...
T Consensus 49 ---~~A~~~~~---~~~v~~Ll~~g~~~---------------------------------------------------- 70 (237)
T 3b7b_A 49 ---MEAAENNH---LEAVKYLIKAGALV---------------------------------------------------- 70 (237)
T ss_dssp ---HHHHHTTC---HHHHHHHHTTTCCC----------------------------------------------------
T ss_pred ---HHHHHhCC---HHHHHHHHhCCCCC----------------------------------------------------
Confidence 11222233 37888999885433
Q ss_pred ccCCCCCChHHHHHHHcCCHHHHHHHhhhCCcccccccCCCCcHHHHHHHcCC--------------cccCCCCCCccch
Q 039657 162 QSGTEKMDNKILLAAKIGVTEMVDRFLKSYPAVIQELNTSEKNLVLLTFEKKN--------------AQQSGRKETPMLI 227 (507)
Q Consensus 162 ~~~d~~g~TpLh~Aa~~G~~~~v~~Ll~~~~~~~~~~d~~G~tpLh~A~~~~~--------------~~~d~~g~TpLH~ 227 (507)
+..+..|.||||+|+..|+.++++.|++.++..++..|..|+||||+|+..++ +.+|.+|.||||+
T Consensus 71 ~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~ 150 (237)
T 3b7b_A 71 DPKDAEGSTCLHLAAKKGHYEVVQYLLSNGQMDVNCQDDGGWTPMIWATEYKHVDLVKLLLSKGSDINIRDNEENICLHW 150 (237)
T ss_dssp CCCCTTSCCHHHHHHHTTCHHHHHHHHTTTCCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHH
T ss_pred CCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCcccCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCccCCCCCCHHHH
Confidence 22355799999999999999999999999855558899999999999999887 6788999999999
Q ss_pred hhhcCCHHHHHHHHhhCCchHHHHHHHhcccccccccccccCCCCcHHHHHHhcCCCcccccCchhhhhHHHHHHhhhhh
Q 039657 228 AARMGVTEMVEQILDTFPANQYLQALLNRKILGESIFRQVDSQGNSALHLAAKFGDHRPWLLPGAALQMQWEIKWYQFVK 307 (507)
Q Consensus 228 Aa~~g~~~iv~~Ll~~~~~~~vv~~Ll~~~~~~~~~in~~D~~GnTpLHlAa~~g~~~~v~~~gaal~~~~el~w~~~v~ 307 (507)
|+..|+.+++++|++.+ ..++.+|..|+||||+|+..|+.+++++ .++
T Consensus 151 A~~~~~~~~~~~Ll~~g-----------------~~~~~~~~~g~t~L~~A~~~~~~~~v~~---------------Ll~ 198 (237)
T 3b7b_A 151 AAFSGCVDIAEILLAAK-----------------CDLHAVNIHGDSPLHIAARENRYDCVVL---------------FLS 198 (237)
T ss_dssp HHHHCCHHHHHHHHTTT-----------------CCTTCCCTTCCCHHHHHHHTTCHHHHHH---------------HHT
T ss_pred HHHCCCHHHHHHHHHcC-----------------CCCCCcCCCCCCHHHHHHHhCCHhHHHH---------------HHH
Confidence 99999999666666554 4578999999999999999999776531 011
Q ss_pred ccCCccccccccCCCCCccccccccc
Q 039657 308 KSMPRHFFTRFNDNGKTPKEVFTETH 333 (507)
Q Consensus 308 ~~~~~~~~~~~N~~G~Tpldl~~~~~ 333 (507)
.+.+.+.+|++|+||++++....
T Consensus 199 ---~gad~~~~d~~g~t~l~~A~~~~ 221 (237)
T 3b7b_A 199 ---RDSDVTLKNKEGETPLQCASLNS 221 (237)
T ss_dssp ---TTCCTTCCCTTSCCHHHHSCTTC
T ss_pred ---cCCCCCccCCCCCCHHHHHHHHH
Confidence 24466789999999999997654
No 5
>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1
Probab=99.92 E-value=5.2e-25 Score=230.57 Aligned_cols=148 Identities=17% Similarity=0.141 Sum_probs=83.5
Q ss_pred cCCCCCChHHHHHHHcCCHHHHHHHhhhCCcccccccCCCCcHHHHHHHcCC--------------cccCCCCCCccchh
Q 039657 163 SGTEKMDNKILLAAKIGVTEMVDRFLKSYPAVIQELNTSEKNLVLLTFEKKN--------------AQQSGRKETPMLIA 228 (507)
Q Consensus 163 ~~d~~g~TpLh~Aa~~G~~~~v~~Ll~~~~~~~~~~d~~G~tpLh~A~~~~~--------------~~~d~~g~TpLH~A 228 (507)
..+..|.||||+|+..|+.++++.|++.++++ +..|..|+||||+|+..++ +.+|..|+||||+|
T Consensus 207 ~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~-~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A 285 (437)
T 1n11_A 207 SPAWNGYTPLHIAAKQNQVEVARSLLQYGGSA-NAESVQGVTPLHLAAQEGHAEMVALLLSKQANGNLGNKSGLTPLHLV 285 (437)
T ss_dssp CCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCCTTCCCTTCCCHHHHH
T ss_pred CcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC-CCCCCCCCCHHHHHHHCCCHHHHHHHHhcCCCCCCCCCCCCCHHHHH
Confidence 33445555555555555555555555555554 4555555555555555554 34455555555555
Q ss_pred hhcCCHHHHHHHHhhCCc--------------------hHHHHHHHhcccccccccccccCCCCcHHHHHHhcCCCcccc
Q 039657 229 ARMGVTEMVEQILDTFPA--------------------NQYLQALLNRKILGESIFRQVDSQGNSALHLAAKFGDHRPWL 288 (507)
Q Consensus 229 a~~g~~~iv~~Ll~~~~~--------------------~~vv~~Ll~~~~~~~~~in~~D~~GnTpLHlAa~~g~~~~v~ 288 (507)
+..|+.+++++|++++.+ -.++++|++.+ +.+|.+|..|+||||+|+..|+.++++
T Consensus 286 ~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g----ad~n~~~~~g~t~L~~A~~~g~~~iv~ 361 (437)
T 1n11_A 286 AQEGHVPVADVLIKHGVMVDATTRMGYTPLHVASHYGNIKLVKFLLQHQ----ADVNAKTKLGYSPLHQAAQQGHTDIVT 361 (437)
T ss_dssp HHHTCHHHHHHHHHHTCCTTCCCSSCCCHHHHHHHSSCSHHHHHHHHTT----CCTTCCCTTSCCHHHHHHHTTCHHHHH
T ss_pred HHcCCHHHHHHHHhCCccCCCCCCCCCCHHHHHHHcCcHHHHHHHHhcC----CCCCCCCCCCCCHHHHHHHCChHHHHH
Confidence 555555555555555433 11355555554 455556666666666666665555432
Q ss_pred cCchhhhhHHHHHHhhhhhccCCccccccccCCCCCccccccccc
Q 039657 289 LPGAALQMQWEIKWYQFVKKSMPRHFFTRFNDNGKTPKEVFTETH 333 (507)
Q Consensus 289 ~~gaal~~~~el~w~~~v~~~~~~~~~~~~N~~G~Tpldl~~~~~ 333 (507)
+ + ++ .+.+.+.+|++|+||++++.+..
T Consensus 362 ~-------------L--l~---~ga~~~~~~~~g~t~l~~A~~~g 388 (437)
T 1n11_A 362 L-------------L--LK---NGASPNEVSSDGTTPLAIAKRLG 388 (437)
T ss_dssp H-------------H--HH---TTCCSCCCCSSSCCHHHHHHHTT
T ss_pred H-------------H--HH---CcCCCCCCCCCCCCHHHHHHHcC
Confidence 1 0 11 23466789999999999987653
No 6
>4b93_B Ankyrin repeat domain-containing protein 27; endocytosis, exocytosis, snare; 2.00A {Homo sapiens}
Probab=99.91 E-value=3e-25 Score=218.80 Aligned_cols=135 Identities=17% Similarity=0.176 Sum_probs=115.8
Q ss_pred ccCCCCCChHHHHHHHcCCHHHHHHHhhhCCcccccccCCCCcHHHHHHHcCC--------------cccCCCCCCccch
Q 039657 162 QSGTEKMDNKILLAAKIGVTEMVDRFLKSYPAVIQELNTSEKNLVLLTFEKKN--------------AQQSGRKETPMLI 227 (507)
Q Consensus 162 ~~~d~~g~TpLh~Aa~~G~~~~v~~Ll~~~~~~~~~~d~~G~tpLh~A~~~~~--------------~~~d~~g~TpLH~ 227 (507)
|.+|.+|+||||+||..|+.++|+.|++.++++ +..+.+|+||+|+|+..++ +.+|.+|+||||+
T Consensus 80 n~~d~~G~TpLh~A~~~g~~~~v~~Ll~~~a~~-~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~g~~~n~~d~~g~TpL~~ 158 (269)
T 4b93_B 80 NVTSQDGSSPLHVAALHGRADLIPLLLKHGANA-GARNADQAVPLHLACQQGHFQVVKCLLDSNAKPNKKDLSGNTPLIY 158 (269)
T ss_dssp TCCCTTSCCHHHHHHHTTCTTHHHHHHHTTCCT-TCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTCCCHHHH
T ss_pred CCcCCCCCCHHHHHHHcCcHHHHHHHHhcCCCc-CccCCCCCCccccccccChHHHHHHHHHCCCCCCCCCCCCCCHHHH
Confidence 445778999999999999999999999999997 8899999999999999887 6789999999999
Q ss_pred hhhcCCHHHHHHHHhhCCchHHHHHHHhcccccccccccccCCCCcHHHHHHhcCCCcccccCchhhhhHHHHHHhhhhh
Q 039657 228 AARMGVTEMVEQILDTFPANQYLQALLNRKILGESIFRQVDSQGNSALHLAAKFGDHRPWLLPGAALQMQWEIKWYQFVK 307 (507)
Q Consensus 228 Aa~~g~~~iv~~Ll~~~~~~~vv~~Ll~~~~~~~~~in~~D~~GnTpLHlAa~~g~~~~v~~~gaal~~~~el~w~~~v~ 307 (507)
||.+|+.++|++|++++ +.+|.+|..|+||||+|+..|+.+++++ .++
T Consensus 159 A~~~g~~~~v~~Ll~~g-----------------advn~~~~~g~t~Lh~A~~~g~~~~v~~---------------Ll~ 206 (269)
T 4b93_B 159 ACSGGHHELVALLLQHG-----------------ASINASNNKGNTALHEAVIEKHVFVVEL---------------LLL 206 (269)
T ss_dssp HHHTTCGGGHHHHHHTT-----------------CCTTCBCTTSCBHHHHHHHTTCHHHHHH---------------HHH
T ss_pred HHHCCCHHHHHHHHHCC-----------------CCCCccccCCCcHHHHHHHcCCHHHHHH---------------HHH
Confidence 99999999666666553 4579999999999999999999887642 111
Q ss_pred ccCCccccccccCCCCCcccccccc
Q 039657 308 KSMPRHFFTRFNDNGKTPKEVFTET 332 (507)
Q Consensus 308 ~~~~~~~~~~~N~~G~Tpldl~~~~ 332 (507)
.+.+++.+|++|+||++++.+.
T Consensus 207 ---~Gad~~~~d~~G~TpL~~A~~~ 228 (269)
T 4b93_B 207 ---HGASVQVLNKRQRTAVDCAEQN 228 (269)
T ss_dssp ---TTCCSCCCCTTSCCSGGGSCTT
T ss_pred ---CCCCCCCcCCCCCCHHHHHHhC
Confidence 2346789999999999999654
No 7
>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1
Probab=99.90 E-value=5.6e-24 Score=222.76 Aligned_cols=150 Identities=14% Similarity=0.167 Sum_probs=104.4
Q ss_pred CcccCCCCCChHHHHHHHcCCHHHHHHHhhhCCcccccccCCCCcHHHHHHHcCC--------------cccCCCCCCcc
Q 039657 160 SAQSGTEKMDNKILLAAKIGVTEMVDRFLKSYPAVIQELNTSEKNLVLLTFEKKN--------------AQQSGRKETPM 225 (507)
Q Consensus 160 ~~~~~d~~g~TpLh~Aa~~G~~~~v~~Ll~~~~~~~~~~d~~G~tpLh~A~~~~~--------------~~~d~~g~TpL 225 (507)
+.+..+..|.||||+|+..|+.++++.|++.++++ +..|.+|+||||+|+..++ +.++..|.|||
T Consensus 171 ~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L 249 (437)
T 1n11_A 171 HPNAAGKNGLTPLHVAVHHNNLDIVKLLLPRGGSP-HSPAWNGYTPLHIAAKQNQVEVARSLLQYGGSANAESVQGVTPL 249 (437)
T ss_dssp CTTCCCSSCCCHHHHHHHTTCHHHHHHHGGGTCCS-CCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHH
T ss_pred CCCCCCCCCCCHHHHHHHcCCHHHHHHHHhCCCCC-CCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHH
Confidence 34555667777777777777777777777777765 6667777777777777665 45667777777
Q ss_pred chhhhcCCHHHHHHHHhhCCc--------------------hHHHHHHHhcccccccccccccCCCCcHHHHHHhcCCCc
Q 039657 226 LIAARMGVTEMVEQILDTFPA--------------------NQYLQALLNRKILGESIFRQVDSQGNSALHLAAKFGDHR 285 (507)
Q Consensus 226 H~Aa~~g~~~iv~~Ll~~~~~--------------------~~vv~~Ll~~~~~~~~~in~~D~~GnTpLHlAa~~g~~~ 285 (507)
|+|+..|+.++|++|++.+++ ..++++|++.+ ..+|.+|..|+||||+|+..|+.+
T Consensus 250 ~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g----~~~~~~~~~g~t~L~~A~~~g~~~ 325 (437)
T 1n11_A 250 HLAAQEGHAEMVALLLSKQANGNLGNKSGLTPLHLVAQEGHVPVADVLIKHG----VMVDATTRMGYTPLHVASHYGNIK 325 (437)
T ss_dssp HHHHHTTCHHHHHHHHTTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHHT----CCTTCCCSSCCCHHHHHHHSSCSH
T ss_pred HHHHHCCCHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhCC----ccCCCCCCCCCCHHHHHHHcCcHH
Confidence 777777777777777776654 12467777766 567777777777777777777766
Q ss_pred ccccCchhhhhHHHHHHhhhhhccCCccccccccCCCCCcccccccc
Q 039657 286 PWLLPGAALQMQWEIKWYQFVKKSMPRHFFTRFNDNGKTPKEVFTET 332 (507)
Q Consensus 286 ~v~~~gaal~~~~el~w~~~v~~~~~~~~~~~~N~~G~Tpldl~~~~ 332 (507)
+++. + ++ ...+++.+|+.|.||++++...
T Consensus 326 ~v~~-------------L--l~---~gad~n~~~~~g~t~L~~A~~~ 354 (437)
T 1n11_A 326 LVKF-------------L--LQ---HQADVNAKTKLGYSPLHQAAQQ 354 (437)
T ss_dssp HHHH-------------H--HH---TTCCTTCCCTTSCCHHHHHHHT
T ss_pred HHHH-------------H--Hh---cCCCCCCCCCCCCCHHHHHHHC
Confidence 6531 1 11 2345678888899999887654
No 8
>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus}
Probab=99.90 E-value=6.4e-24 Score=214.09 Aligned_cols=207 Identities=19% Similarity=0.190 Sum_probs=144.9
Q ss_pred cccccCCCCcHHHHhhcCCCcccCCCCccchhhhhhccccCCCCCCCCCCCCCCchhhHHHHHHHHHHHHHHHhcCCchh
Q 039657 2 VNSVNENGLTPLHILASKPNAFESSSRLGLFDSIIYCCIDLSKKDDGEDQLFPPNYATCVLLFKVMMKAMLIVLGLGIWR 81 (507)
Q Consensus 2 v~~~D~~G~TPLh~lA~~p~~f~Sg~~l~~~~~~iy~~~~v~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~g~~~ 81 (507)
+|.+|.+|.||||++|. ..++..++.++-+...++..+... ..|.
T Consensus 51 ~~~~d~~g~t~L~~A~~-------~g~~~~v~~Ll~~g~~~~~~~~~g--~t~L-------------------------- 95 (351)
T 3utm_A 51 CHASDGRKSTPLHLAAG-------YNRVRIVQLLLQHGADVHAKDKGG--LVPL-------------------------- 95 (351)
T ss_dssp CCCSSTTCCCHHHHHHH-------TTCHHHHHHHHHTTCCTTCCCTTC--CCHH--------------------------
T ss_pred cccCCCCCCCHHHHHHH-------cCCHHHHHHHHHcCCCCCccCCCC--CcHH--------------------------
Confidence 46778899999999994 345677777777766554333111 1111
Q ss_pred hhHHHHHHHHHhhHHHHHHHHHHhhcccccccCCCCCCCCCCCCcccccccCCCCCCCCCccccccccccccccccCCCc
Q 039657 82 INHITEKKERHTWAIQVMCELVQHASLYKYEDNGPKRRNSGPKEDEEAFSVSETLPVPDTGEISHQNKSTNHKKIENGSA 161 (507)
Q Consensus 82 i~~i~~~k~~h~~a~~i~~~Ll~~~~~~~~~~~g~~~~~p~~~~d~~~~~~~~~~~~p~~~e~~~~~~~~~~~~~~~~~~ 161 (507)
.++....| .++++.|++++...
T Consensus 96 ---~~A~~~g~---~~iv~~Ll~~g~~~---------------------------------------------------- 117 (351)
T 3utm_A 96 ---HNACSYGH---YEVTELLLKHGACV---------------------------------------------------- 117 (351)
T ss_dssp ---HHHHHTTC---HHHHHHHHHTTCCT----------------------------------------------------
T ss_pred ---HHHHHCCC---HHHHHHHHHCCCCC----------------------------------------------------
Confidence 12222333 37888899885433
Q ss_pred ccCCCCCChHHHHHHHcCCHHHHHHHhhhCCcccccc-------------------------------------------
Q 039657 162 QSGTEKMDNKILLAAKIGVTEMVDRFLKSYPAVIQEL------------------------------------------- 198 (507)
Q Consensus 162 ~~~d~~g~TpLh~Aa~~G~~~~v~~Ll~~~~~~~~~~------------------------------------------- 198 (507)
+..|..|.||||+|+..|+.++++.|++.++++ +..
T Consensus 118 ~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~g~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 (351)
T 3utm_A 118 NAMDLWQFTPLHEAASKNRVEVCSLLLSHGADP-TLVNCHGKSAVDMAPTPELRERLTYEFKGHSLLQAAREADLAKVKK 196 (351)
T ss_dssp TCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHCSSHHHHHHHHHHHHHHHHHHHHHTTCHHHHHH
T ss_pred CCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC-ccccCCCCcchHHHhhhhhHHHHHhhhcccHHHHHHHhccHHHHHH
Confidence 233567999999999999999999999998875 333
Q ss_pred -----------cCCCCcHHHHHHHcCC-----------------cccCCCCCCccchhhhcCCHHHHHHHHhhCCchHHH
Q 039657 199 -----------NTSEKNLVLLTFEKKN-----------------AQQSGRKETPMLIAARMGVTEMVEQILDTFPANQYL 250 (507)
Q Consensus 199 -----------d~~G~tpLh~A~~~~~-----------------~~~d~~g~TpLH~Aa~~g~~~iv~~Ll~~~~~~~vv 250 (507)
+..|+||||+|+..++ +.+|.+|+||||+|+.+|+.++|++|++
T Consensus 197 ~l~~~~~~~~~~~~~~t~L~~A~~~~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~-------- 268 (351)
T 3utm_A 197 TLALEIINFKQPQSHETALHCAVASLHPKRKQVAELLLRKGANVNEKNKDFMTPLHVAAERAHNDVMEVLHK-------- 268 (351)
T ss_dssp HTTTCCTTCCCTTTCCCHHHHHHHCCSTTHHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHH--------
T ss_pred HHHhhcccccCCCCCCCHHHHHHHHhCccHHHHHHHHHHcCCCcCCcCCCCCCHHHHHHHcCCHHHHHHHHH--------
Confidence 3556777777777643 5677778888888888888885555554
Q ss_pred HHHHhcccccccccccccCCCCcHHHHHHhcCCCcccccCchhhhhHHHHHHhhhhhccCCccccccccCCCCCcccccc
Q 039657 251 QALLNRKILGESIFRQVDSQGNSALHLAAKFGDHRPWLLPGAALQMQWEIKWYQFVKKSMPRHFFTRFNDNGKTPKEVFT 330 (507)
Q Consensus 251 ~~Ll~~~~~~~~~in~~D~~GnTpLHlAa~~g~~~~v~~~gaal~~~~el~w~~~v~~~~~~~~~~~~N~~G~Tpldl~~ 330 (507)
.+ +.+|.+|..|+||||+|+..|+.+++++ .++ .+.+.+.+|++|+||++++.
T Consensus 269 -----~g----a~~n~~d~~g~t~L~~A~~~~~~~~v~~---------------Ll~---~gad~~~~~~~g~tal~~a~ 321 (351)
T 3utm_A 269 -----HG----AKMNALDSLGQTALHRAALAGHLQTCRL---------------LLS---YGSDPSIISLQGFTAAQMGN 321 (351)
T ss_dssp -----TT----CCTTCCCTTSCCHHHHHHHHTCHHHHHH---------------HHH---TTCCTTCCCTTSCCHHHHSC
T ss_pred -----CC----CCCCCcCCCCCCHHHHHHHcCcHHHHHH---------------HHH---cCCCCCCcCCCCCChhhhhh
Confidence 44 5679999999999999999999887632 111 23456789999999999986
Q ss_pred ccccccc
Q 039657 331 ETHKDLV 337 (507)
Q Consensus 331 ~~~~~l~ 337 (507)
+.-.++.
T Consensus 322 ~~~~~~l 328 (351)
T 3utm_A 322 EAVQQIL 328 (351)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 6544433
No 9
>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens}
Probab=99.90 E-value=7.9e-24 Score=209.82 Aligned_cols=199 Identities=15% Similarity=0.127 Sum_probs=148.0
Q ss_pred cccccCCCCcHHHHhhcCCCcccCCCCccchhhhhhccccCCCCCCCCCCCCCCchhhHHHHHHHHHHHHHHHhcCCchh
Q 039657 2 VNSVNENGLTPLHILASKPNAFESSSRLGLFDSIIYCCIDLSKKDDGEDQLFPPNYATCVLLFKVMMKAMLIVLGLGIWR 81 (507)
Q Consensus 2 v~~~D~~G~TPLh~lA~~p~~f~Sg~~l~~~~~~iy~~~~v~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~g~~~ 81 (507)
++.+|.+|.||||++|. ......++.++-....++..+... ..|.
T Consensus 52 ~~~~~~~g~t~L~~Aa~-------~g~~~~v~~Ll~~g~~~~~~~~~g--~t~L-------------------------- 96 (285)
T 3d9h_A 52 LMGDAVSDWSPMHEAAI-------HGHQLSLRNLISQGWAVNIITADH--VSPL-------------------------- 96 (285)
T ss_dssp TCSSSCCSCCHHHHHHH-------TTCHHHHHHHHHTTCCSCEECTTC--CCHH--------------------------
T ss_pred ccCCCccCCCHHHHHHH-------cCCHHHHHHHHHCCCCCCCcCCCC--CCHH--------------------------
Confidence 35689999999999995 345667777777665554332111 1111
Q ss_pred hhHHHHHHHHHhhHHHHHHHHHHhhcccccccCCCCCCCCCCCCcccccccCCCCCCCCCccccccccccccccccCCCc
Q 039657 82 INHITEKKERHTWAIQVMCELVQHASLYKYEDNGPKRRNSGPKEDEEAFSVSETLPVPDTGEISHQNKSTNHKKIENGSA 161 (507)
Q Consensus 82 i~~i~~~k~~h~~a~~i~~~Ll~~~~~~~~~~~g~~~~~p~~~~d~~~~~~~~~~~~p~~~e~~~~~~~~~~~~~~~~~~ 161 (507)
.++....| .++++.|++++...
T Consensus 97 ---~~A~~~g~---~~~v~~Ll~~ga~~---------------------------------------------------- 118 (285)
T 3d9h_A 97 ---HEACLGGH---LSCVKILLKHGAQV---------------------------------------------------- 118 (285)
T ss_dssp ---HHHHHTTC---HHHHHHHHHTTCCS----------------------------------------------------
T ss_pred ---HHHHHCCc---HHHHHHHHHCCCCC----------------------------------------------------
Confidence 12222333 37888999885433
Q ss_pred ccCCCCCChHHHHHHHcCCHHHHHHHhhhCCcccccccCCCCcHHHHHHHcCC--------------cccCCCCCCccch
Q 039657 162 QSGTEKMDNKILLAAKIGVTEMVDRFLKSYPAVIQELNTSEKNLVLLTFEKKN--------------AQQSGRKETPMLI 227 (507)
Q Consensus 162 ~~~d~~g~TpLh~Aa~~G~~~~v~~Ll~~~~~~~~~~d~~G~tpLh~A~~~~~--------------~~~d~~g~TpLH~ 227 (507)
+.+|..|.||||+|+..|+.++++.|++.++++ + .+.+|+||||+|+..|+ +.+|.+|+||||+
T Consensus 119 ~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~-~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~t~L~~ 196 (285)
T 3d9h_A 119 NGVTADWHTPLFNACVSGSWDCVNLLLQHGASV-Q-PESDLASPIHEAARRGHVECVNSLIAYGGNIDHKISHLGTPLYL 196 (285)
T ss_dssp SCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCS-S-CSCTTSCHHHHHHHHTCHHHHHHHHHTTCCTTCCBTTTBCHHHH
T ss_pred CCCCCCCCCHHHHHHHcCHHHHHHHHHHCCCCC-C-CCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHH
Confidence 334667999999999999999999999999886 3 35569999999999887 6789999999999
Q ss_pred hhhcCCHHHHHHHHhhCCchHHHHHHHhcccccccccccccCCCCcHHHHHHhcCCCcccccCchhhhhHHHHHHhhhhh
Q 039657 228 AARMGVTEMVEQILDTFPANQYLQALLNRKILGESIFRQVDSQGNSALHLAAKFGDHRPWLLPGAALQMQWEIKWYQFVK 307 (507)
Q Consensus 228 Aa~~g~~~iv~~Ll~~~~~~~vv~~Ll~~~~~~~~~in~~D~~GnTpLHlAa~~g~~~~v~~~gaal~~~~el~w~~~v~ 307 (507)
|+.+|+.++|++|++.+++ +| +|..|+||||+|+..|+.+++++ + ++
T Consensus 197 A~~~~~~~~v~~Ll~~ga~-----------------~~-~~~~g~t~L~~A~~~~~~~~v~~-------------L--l~ 243 (285)
T 3d9h_A 197 ACENQQRACVKKLLESGAD-----------------VN-QGKGQDSPLHAVVRTASEELACL-------------L--MD 243 (285)
T ss_dssp HHHTTCHHHHHHHHHTTCC-----------------TT-CCBTTBCHHHHHHHTTCHHHHHH-------------H--HH
T ss_pred HHHcCcHHHHHHHHHCCCC-----------------CC-CCCCCCCHHHHHHHcCCHHHHHH-------------H--HH
Confidence 9999999977776666443 45 48999999999999999877531 1 11
Q ss_pred ccCCccccccccCCCCCccccccc
Q 039657 308 KSMPRHFFTRFNDNGKTPKEVFTE 331 (507)
Q Consensus 308 ~~~~~~~~~~~N~~G~Tpldl~~~ 331 (507)
.+.+.+.+|++|+||++++..
T Consensus 244 ---~gad~~~~d~~g~t~l~~A~~ 264 (285)
T 3d9h_A 244 ---FGADTQAKNAEGKRPVELVPP 264 (285)
T ss_dssp ---TTCCTTCCCTTSCCGGGGSCT
T ss_pred ---CCCCCCCcCCCCCCHHHHhcC
Confidence 244678999999999999973
No 10
>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A
Probab=99.90 E-value=1.4e-23 Score=199.32 Aligned_cols=134 Identities=19% Similarity=0.214 Sum_probs=113.5
Q ss_pred CCCCChHHHHHHHcCCHHHHHHHhhhC--CcccccccCCCCcHHHHHHHcCC--------------cccCCCCCCccchh
Q 039657 165 TEKMDNKILLAAKIGVTEMVDRFLKSY--PAVIQELNTSEKNLVLLTFEKKN--------------AQQSGRKETPMLIA 228 (507)
Q Consensus 165 d~~g~TpLh~Aa~~G~~~~v~~Ll~~~--~~~~~~~d~~G~tpLh~A~~~~~--------------~~~d~~g~TpLH~A 228 (507)
+..|.||||+|+..|+.++++.|++.+ +++ +..|.+|+||||+|+..++ +.+|.+|+||||+|
T Consensus 69 ~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~-~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A 147 (228)
T 2dzn_A 69 DDSGWTPFHIACSVGNLEVVKSLYDRPLKPDL-NKITNQGVTCLHLAVGKKWFEVSQFLIENGASVRIKDKFNQIPLHRA 147 (228)
T ss_dssp CTTSCCHHHHHHHHCCHHHHHHHHSSSSCCCT-TCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCSCCCCTTSCCHHHHH
T ss_pred CCCCCCHHHHHHHcCCHHHHHHHHhCCCCccc-ccCCcCCCCHHHHHHHcCCHhHHHHHHHcCCCccccCCCCCCHHHHH
Confidence 567999999999999999999999998 776 8889999999999999887 67899999999999
Q ss_pred hhcCCHHHHHHHHhhCCchHHHHHHHhcccccccccccccCCCCcHHHHHHhcCCCcccccCchhhhhHHHHHHhhhhhc
Q 039657 229 ARMGVTEMVEQILDTFPANQYLQALLNRKILGESIFRQVDSQGNSALHLAAKFGDHRPWLLPGAALQMQWEIKWYQFVKK 308 (507)
Q Consensus 229 a~~g~~~iv~~Ll~~~~~~~vv~~Ll~~~~~~~~~in~~D~~GnTpLHlAa~~g~~~~v~~~gaal~~~~el~w~~~v~~ 308 (507)
+..|+.+++++|++.++ ..+|.+|..|+||||+|+..|+.++++. .+++
T Consensus 148 ~~~~~~~~v~~Ll~~g~----------------~~~~~~d~~g~t~L~~A~~~~~~~~v~~---------------Ll~~ 196 (228)
T 2dzn_A 148 ASVGSLKLIELLCGLGK----------------SAVNWQDKQGWTPLFHALAEGHGDAAVL---------------LVEK 196 (228)
T ss_dssp HHTTCHHHHHHHHTTTC----------------CCSCCCCTTSCCHHHHHHHTTCHHHHHH---------------HHHH
T ss_pred HHcCCHHHHHHHHhcCc----------------ccccCcCCCCCCHHHHHHHcCCHHHHHH---------------HHHh
Confidence 99999997777776653 3578999999999999999999876531 1101
Q ss_pred cCCccccccccCCCCCcccccccc
Q 039657 309 SMPRHFFTRFNDNGKTPKEVFTET 332 (507)
Q Consensus 309 ~~~~~~~~~~N~~G~Tpldl~~~~ 332 (507)
.+.+.+.+|++|+||++++.+.
T Consensus 197 --~ga~~~~~~~~g~t~l~~A~~~ 218 (228)
T 2dzn_A 197 --YGAEYDLVDNKGAKAEDVALNE 218 (228)
T ss_dssp --HCCCSCCBCTTSCBGGGGCSST
T ss_pred --cCCCCCccCCCCCcHHHHHHHH
Confidence 2346688999999999999654
No 11
>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A
Probab=99.90 E-value=5.1e-24 Score=203.02 Aligned_cols=135 Identities=22% Similarity=0.156 Sum_probs=113.5
Q ss_pred CCCCCChHHHHHHHcCCHHHHHHHhhhCCcccccccCCCCcHHHHHHHcCC--------------cccCCCCCCccchhh
Q 039657 164 GTEKMDNKILLAAKIGVTEMVDRFLKSYPAVIQELNTSEKNLVLLTFEKKN--------------AQQSGRKETPMLIAA 229 (507)
Q Consensus 164 ~d~~g~TpLh~Aa~~G~~~~v~~Ll~~~~~~~~~~d~~G~tpLh~A~~~~~--------------~~~d~~g~TpLH~Aa 229 (507)
.|..|+||||+|+..|+.++++.|++.++++ +.+|.+|+||||+|+..++ +.+|..|.||||+|+
T Consensus 69 ~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~ 147 (231)
T 3aji_A 69 KDDAGWSPLHIAASAGXDEIVKALLVKGAHV-NAVNQNGCTPLHYAASKNRHEIAVMLLEGGANPDAKDHYDATAMHRAA 147 (231)
T ss_dssp CCTTSCCHHHHHHHHTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHH
T ss_pred cCCCCCCHHHHHHHcCHHHHHHHHHHcCCCC-CCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCcHHHHHH
Confidence 3667999999999999999999999999997 8899999999999999887 678899999999999
Q ss_pred hcCCHHHHHHHHhhCCchHHHHHHHhcccccccccccccCCCCcHHHHHHhcCCCcccccCchhhhhHHHHHHhhhhhcc
Q 039657 230 RMGVTEMVEQILDTFPANQYLQALLNRKILGESIFRQVDSQGNSALHLAAKFGDHRPWLLPGAALQMQWEIKWYQFVKKS 309 (507)
Q Consensus 230 ~~g~~~iv~~Ll~~~~~~~vv~~Ll~~~~~~~~~in~~D~~GnTpLHlAa~~g~~~~v~~~gaal~~~~el~w~~~v~~~ 309 (507)
..|+.+++++|++.+ ..++.+|..|+||||+|+..|+.++++. + ++
T Consensus 148 ~~~~~~~v~~Ll~~g-----------------~~~~~~~~~g~t~L~~A~~~~~~~~v~~-------------L--l~-- 193 (231)
T 3aji_A 148 AKGNLKMVHILLFYK-----------------ASTNIQDTEGNTPLHLACDEERVEEAKF-------------L--VT-- 193 (231)
T ss_dssp HHTCHHHHHHHHHTT-----------------CCSCCCCTTSCCHHHHHHHTTCHHHHHH-------------H--HH--
T ss_pred HcCCHHHHHHHHhcC-----------------CCccccCCCCCCHHHHHHHCCCHHHHHH-------------H--HH--
Confidence 999999666666553 4578999999999999999999776531 1 11
Q ss_pred CCccccccccCCCCCcccccccccc
Q 039657 310 MPRHFFTRFNDNGKTPKEVFTETHK 334 (507)
Q Consensus 310 ~~~~~~~~~N~~G~Tpldl~~~~~~ 334 (507)
.+.+.+.+|++|+||++++.+.+.
T Consensus 194 -~ga~~~~~~~~g~t~l~~A~~~~~ 217 (231)
T 3aji_A 194 -QGASIYIENKEEKTPLQVAKGGLG 217 (231)
T ss_dssp -TTCCSCCCCTTSCCHHHHSCHHHH
T ss_pred -CCCCCCCCCCCCCCHHHHHHhhHH
Confidence 134567899999999999976543
No 12
>2xai_A ASB-9, ankyrin repeat and SOCS box protein 9; transcription regulation, autoantibody; 2.58A {Homo sapiens}
Probab=99.90 E-value=1.2e-23 Score=205.39 Aligned_cols=132 Identities=17% Similarity=0.162 Sum_probs=108.1
Q ss_pred cCCCCCChHHHHHHHcCCHHHHHHHhhhCCcccccccCCCCcHHHHHHHcCC--------------cccCCCCCCccchh
Q 039657 163 SGTEKMDNKILLAAKIGVTEMVDRFLKSYPAVIQELNTSEKNLVLLTFEKKN--------------AQQSGRKETPMLIA 228 (507)
Q Consensus 163 ~~d~~g~TpLh~Aa~~G~~~~v~~Ll~~~~~~~~~~d~~G~tpLh~A~~~~~--------------~~~d~~g~TpLH~A 228 (507)
..|..|+||||+|+..|+.++++.|++.++++ + .+.+|+||||+|+..++ +.+|.+|+||||+|
T Consensus 64 ~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~-~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A 141 (261)
T 2xai_A 64 GVTADWHTPLFNACVSGSWDCVNLLLQHGASV-Q-PESDLASPIHEAARRGHVECVNSLIAYGGNIDHKISHLGTPLYLA 141 (261)
T ss_dssp CCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCS-S-CSCTTCCHHHHHHHTTCHHHHHHHHHTTCCTTCCBTTTBCHHHHH
T ss_pred CCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCC-C-CCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCCcCCCCCCCHHHHH
Confidence 33667999999999999999999999999887 3 45679999999999987 67889999999999
Q ss_pred hhcCCHHHHHHHHhhCCchHHHHHHHhcccccccccccccCCCCcHHHHHHhcCCCcccccCchhhhhHHHHHHhhhhhc
Q 039657 229 ARMGVTEMVEQILDTFPANQYLQALLNRKILGESIFRQVDSQGNSALHLAAKFGDHRPWLLPGAALQMQWEIKWYQFVKK 308 (507)
Q Consensus 229 a~~g~~~iv~~Ll~~~~~~~vv~~Ll~~~~~~~~~in~~D~~GnTpLHlAa~~g~~~~v~~~gaal~~~~el~w~~~v~~ 308 (507)
+.+|+.++|++|++.+++ +| +|..|+||||+|+..|+.+++++ .++
T Consensus 142 ~~~~~~~~v~~Ll~~g~~-----------------~~-~~~~g~t~Lh~A~~~~~~~~v~~---------------Ll~- 187 (261)
T 2xai_A 142 CENQQRACVKKLLESGAD-----------------VN-QGKGQDSPLHAVARTASEELACL---------------LMD- 187 (261)
T ss_dssp HHTTCHHHHHHHHHHTCC-----------------TT-CCBTTBCHHHHHHHHTCHHHHHH---------------HHH-
T ss_pred HHhCCHHHHHHHHHcCCC-----------------CC-CCCCCCChHHHHHHcCCHHHHHH---------------HHH-
Confidence 999999977777776554 45 38899999999999999776532 111
Q ss_pred cCCccccccccCCCCCcccccccc
Q 039657 309 SMPRHFFTRFNDNGKTPKEVFTET 332 (507)
Q Consensus 309 ~~~~~~~~~~N~~G~Tpldl~~~~ 332 (507)
.+.+.+.+|++|+||++++...
T Consensus 188 --~gad~~~~d~~g~tpl~~A~~~ 209 (261)
T 2xai_A 188 --FGADTQAKNAEGKRPVELVPPE 209 (261)
T ss_dssp --TTCCTTCCCTTSCCGGGGSCTT
T ss_pred --cCCCCCCcCCCCCChhhhcccc
Confidence 2445688999999999998743
No 13
>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E
Probab=99.90 E-value=1.2e-23 Score=201.74 Aligned_cols=136 Identities=14% Similarity=0.098 Sum_probs=107.5
Q ss_pred CCCCCChHHHHHHHcCCHHHHHHHhhhCCc-----ccccccCCCCcHHHHHHHcCC--------------cccCC-CCCC
Q 039657 164 GTEKMDNKILLAAKIGVTEMVDRFLKSYPA-----VIQELNTSEKNLVLLTFEKKN--------------AQQSG-RKET 223 (507)
Q Consensus 164 ~d~~g~TpLh~Aa~~G~~~~v~~Ll~~~~~-----~~~~~d~~G~tpLh~A~~~~~--------------~~~d~-~g~T 223 (507)
+|..|.||||+|+..|+.++++.|++.+++ .++..|..|+||||+|+..++ +.+|. .|+|
T Consensus 74 ~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~g~t 153 (236)
T 1ikn_D 74 RDFRGNTPLHLACEQGCLASVGVLTQSCTTPHLHSILKATNYNGHTCLHLASIHGYLGIVELLVSLGADVNAQEPCNGRT 153 (236)
T ss_dssp CCTTCCCHHHHHHHHTCHHHHHHHHHSTTTTSSSCGGGCCCTTCCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTTCCC
T ss_pred cCCCCCCHHHHHHHcCCHHHHHHHHhcccchhHHHHhhccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCC
Confidence 366799999999999999999999999864 357789999999999999987 56776 9999
Q ss_pred ccchhhhcCCHHHHHHHHhhCCchHHHHHHHhcccccccccccccCCCCcHHHHHHhcCCCcccccCchhhhhHHHHHHh
Q 039657 224 PMLIAARMGVTEMVEQILDTFPANQYLQALLNRKILGESIFRQVDSQGNSALHLAAKFGDHRPWLLPGAALQMQWEIKWY 303 (507)
Q Consensus 224 pLH~Aa~~g~~~iv~~Ll~~~~~~~vv~~Ll~~~~~~~~~in~~D~~GnTpLHlAa~~g~~~~v~~~gaal~~~~el~w~ 303 (507)
|||+|+..|+.++|++|+++ | +.++.+|..|+||||+|+..|+.+++++
T Consensus 154 pL~~A~~~~~~~~v~~Ll~~-------------g----a~~~~~~~~g~tpl~~A~~~~~~~~~~~-------------- 202 (236)
T 1ikn_D 154 ALHLAVDLQNPDLVSLLLKC-------------G----ADVNRVTYQGYSPYQLTWGRPSTRIQQQ-------------- 202 (236)
T ss_dssp HHHHHHHTTCHHHHHHHHTT-------------T----CCSCCCCTTCCCGGGGCTTSSCHHHHHH--------------
T ss_pred HHHHHHHcCCHHHHHHHHHc-------------C----CCCCcccCCCCCHHHHHHccCchHHHHH--------------
Confidence 99999999999966666655 3 4578999999999999999999877532
Q ss_pred hhhhccCCccccccccCCCCCcccccccc
Q 039657 304 QFVKKSMPRHFFTRFNDNGKTPKEVFTET 332 (507)
Q Consensus 304 ~~v~~~~~~~~~~~~N~~G~Tpldl~~~~ 332 (507)
+...-........|.+|+||.|...+.
T Consensus 203 --Ll~~ga~~~~~~~~~~~~~~~~~~~~~ 229 (236)
T 1ikn_D 203 --LGQLTLENLQMLPESEDEESYDTESEF 229 (236)
T ss_dssp --HHTTSCGGGSSCCCCCTTTCCCCC---
T ss_pred --HHHcchhhhhcCCccchHHHHhhhccc
Confidence 111111223457899999999876543
No 14
>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1
Probab=99.89 E-value=2.4e-23 Score=214.34 Aligned_cols=133 Identities=14% Similarity=0.169 Sum_probs=103.7
Q ss_pred CCCCChHHHHHHHcCCHHHHHHHhhhC---CcccccccCCCCcHHHHHHHcC---C--------------c--------c
Q 039657 165 TEKMDNKILLAAKIGVTEMVDRFLKSY---PAVIQELNTSEKNLVLLTFEKK---N--------------A--------Q 216 (507)
Q Consensus 165 d~~g~TpLh~Aa~~G~~~~v~~Ll~~~---~~~~~~~d~~G~tpLh~A~~~~---~--------------~--------~ 216 (507)
|..|.||||+|+..|+.++++.|++.+ .++ +..|.+|+||||+|+..+ + + .
T Consensus 196 ~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~-~~~d~~g~t~L~~A~~~~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~ 274 (373)
T 2fo1_E 196 NKSERSALHQAAANRDFGMMVYMLNSTKLKGDI-EELDRNGMTALMIVAHNEGRDQVASAKLLVEKGAKVDYDGAARKDS 274 (373)
T ss_dssp CTTCCCHHHHHHHTTCHHHHHHHTTSHHHHHTT-SCCCTTSCCHHHHHHHSCSTTHHHHHHHHHHHTCCSSCCSGGGTSS
T ss_pred CCCCCCHHHHHHHCCCHHHHHHHHhcCccccCh-hhcCCCCCCHHHHHHHhCCcchHHHHHHHHHCCCCcccccccccCc
Confidence 556888888888888888888888876 454 777888888888888876 2 1 2
Q ss_pred cCCCCCCccchhhhcCCHHHHHHHHhhCCchHHHHHHHhcccccccccccccCCCCcHHHHHHhcCCCcccccCchhhhh
Q 039657 217 QSGRKETPMLIAARMGVTEMVEQILDTFPANQYLQALLNRKILGESIFRQVDSQGNSALHLAAKFGDHRPWLLPGAALQM 296 (507)
Q Consensus 217 ~d~~g~TpLH~Aa~~g~~~iv~~Ll~~~~~~~vv~~Ll~~~~~~~~~in~~D~~GnTpLHlAa~~g~~~~v~~~gaal~~ 296 (507)
+|..|+||||+|+.+|+.++|++|++.++ ..+|.+|.+|+||||+|+..|+.+++++
T Consensus 275 ~d~~g~t~Lh~A~~~g~~~~v~~Ll~~~~----------------~~~n~~d~~g~TpL~~A~~~g~~~iv~~------- 331 (373)
T 2fo1_E 275 EKYKGRTALHYAAQVSNMPIVKYLVGEKG----------------SNKDKQDEDGKTPIMLAAQEGRIEVVMY------- 331 (373)
T ss_dssp SSCCCCCTHHHHHSSCCHHHHHHHHHHSC----------------CCTTCCCTTCCCHHHHHHHHTCHHHHHH-------
T ss_pred ccccCCCHHHHHHHhCCHHHHHHHHHhcC----------------CCccCcCCCCCCHHHHHHHcCCHHHHHH-------
Confidence 56688888888888888886666665532 4679999999999999999999887632
Q ss_pred HHHHHHhhhhhccCCccccccccCCCCCcccccccc
Q 039657 297 QWEIKWYQFVKKSMPRHFFTRFNDNGKTPKEVFTET 332 (507)
Q Consensus 297 ~~el~w~~~v~~~~~~~~~~~~N~~G~Tpldl~~~~ 332 (507)
.++ .+.+++.+|.+|+||++++...
T Consensus 332 --------Ll~---~gad~~~~d~~g~t~l~~A~~~ 356 (373)
T 2fo1_E 332 --------LIQ---QGASVEAVDATDHTARQLAQAN 356 (373)
T ss_dssp --------HHH---TTCCSSCCCSSSCCHHHHHHHT
T ss_pred --------HHH---cCCCccCCCCCCCCHHHHHHHc
Confidence 111 2446688999999999998765
No 15
>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1
Probab=99.89 E-value=2.9e-23 Score=202.77 Aligned_cols=147 Identities=18% Similarity=0.135 Sum_probs=118.7
Q ss_pred CCCCChHHHHHHHcCCHHHHHHHhhhCCcccccccCCCCcHHHHHHHcCC--------------ccc----------CCC
Q 039657 165 TEKMDNKILLAAKIGVTEMVDRFLKSYPAVIQELNTSEKNLVLLTFEKKN--------------AQQ----------SGR 220 (507)
Q Consensus 165 d~~g~TpLh~Aa~~G~~~~v~~Ll~~~~~~~~~~d~~G~tpLh~A~~~~~--------------~~~----------d~~ 220 (507)
|..|.||||+|+..|+.++++.|++.++++ +.+|..|+||||+|+..++ +.+ +..
T Consensus 69 ~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~~~~~~~~~ 147 (285)
T 1wdy_A 69 KKNGATPFLLAAIAGSVKLLKLFLSKGADV-NECDFYGFTAFMEAAVYGKVKALKFLYKRGANVNLRRKTKEDQERLRKG 147 (285)
T ss_dssp CTTCCCHHHHHHHHTCHHHHHHHHHTTCCT-TCBCTTCCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCCCCHHHHHTTCC
T ss_pred CCCCCCHHHHHHHcCCHHHHHHHHHcCCCC-CccCcccCCHHHHHHHhCCHHHHHHHHHhCCCcccccccHHHHHhhccC
Confidence 567899999999999999999999999887 8889999999999998887 222 778
Q ss_pred CCCccchhhhcCCHHHHHHHHhh-CCc------------------------hHHHHHHHhcccccccccccccCCCCcHH
Q 039657 221 KETPMLIAARMGVTEMVEQILDT-FPA------------------------NQYLQALLNRKILGESIFRQVDSQGNSAL 275 (507)
Q Consensus 221 g~TpLH~Aa~~g~~~iv~~Ll~~-~~~------------------------~~vv~~Ll~~~~~~~~~in~~D~~GnTpL 275 (507)
|.||||+|+..|+.+++++|++. +.+ ..++++|++.+ ..+|.+|..|+|||
T Consensus 148 g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~i~~~Ll~~g----~~~~~~~~~g~t~L 223 (285)
T 1wdy_A 148 GATALMDAAEKGHVEVLKILLDEMGADVNACDNMGRNALIHALLSSDDSDVEAITHLLLDHG----ADVNVRGERGKTPL 223 (285)
T ss_dssp CCCHHHHHHHHTCHHHHHHHHHTSCCCTTCCCTTSCCHHHHHHHCSCTTTHHHHHHHHHHTT----CCSSCCCTTSCCHH
T ss_pred CCcHHHHHHHcCCHHHHHHHHHhcCCCCCccCCCCCCHHHHHHHccccchHHHHHHHHHHcC----CCCCCcCCCCCcHH
Confidence 99999999999999999999987 333 12577888877 77899999999999
Q ss_pred HHHHhcCCCcccccCchhhhhHHHHHHhhhhhccCCccccccccCCCCCccccccccc
Q 039657 276 HLAAKFGDHRPWLLPGAALQMQWEIKWYQFVKKSMPRHFFTRFNDNGKTPKEVFTETH 333 (507)
Q Consensus 276 HlAa~~g~~~~v~~~gaal~~~~el~w~~~v~~~~~~~~~~~~N~~G~Tpldl~~~~~ 333 (507)
|+|+..|+.++++. + ++ ..+.+.+.+|.+|+||++++.+..
T Consensus 224 ~~A~~~~~~~~v~~-------------L--l~--~~g~~~~~~~~~g~t~l~~A~~~~ 264 (285)
T 1wdy_A 224 ILAVEKKHLGLVQR-------------L--LE--QEHIEINDTDSDGKTALLLAVELK 264 (285)
T ss_dssp HHHHHTTCHHHHHH-------------H--HH--SSSCCTTCCCTTSCCHHHHHHHTT
T ss_pred HHHHHcCCHHHHHH-------------H--Hh--ccCCCccccCCCCCcHHHHHHHcC
Confidence 99999998776531 1 11 124456789999999999987653
No 16
>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1
Probab=99.89 E-value=5.1e-24 Score=211.07 Aligned_cols=136 Identities=18% Similarity=0.187 Sum_probs=111.3
Q ss_pred CCCCCChHHHHHHHcCCHHHHHHHhhhCCcccccccCCCCcHHHHHHHcCC-----------------------------
Q 039657 164 GTEKMDNKILLAAKIGVTEMVDRFLKSYPAVIQELNTSEKNLVLLTFEKKN----------------------------- 214 (507)
Q Consensus 164 ~d~~g~TpLh~Aa~~G~~~~v~~Ll~~~~~~~~~~d~~G~tpLh~A~~~~~----------------------------- 214 (507)
.|..|+||||+|+..|+.++|+.|++.++++ +..|.+|+||||+|+..++
T Consensus 102 ~~~~g~tpL~~A~~~g~~~~v~~Ll~~g~~~-~~~~~~g~t~l~~A~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~ 180 (299)
T 1s70_B 102 PDNEGWIPLHAAASCGYLDIAEYLISQGAHV-GAVNSEGDTPLDIAEEEAMEELLQNEVNRQGVDIEAARKEEERIMLRD 180 (299)
T ss_dssp CCTTSCCHHHHHHHHTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHCCSHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHH
T ss_pred CCCCCCcHHHHHHHcCCHHHHHHHHhCCCCC-CCcCCCCCCHHHHHHhcchHHHHHHHHhhcCCCchhhhhhhhhHHHHH
Confidence 3667999999999999999999999999997 8889999999999875543
Q ss_pred ------------cccCCCCCCccchhhhcCCHHHHHHHHhhCCchHHHHHHHhcccccccccccccCCCCcHHHHHHhcC
Q 039657 215 ------------AQQSGRKETPMLIAARMGVTEMVEQILDTFPANQYLQALLNRKILGESIFRQVDSQGNSALHLAAKFG 282 (507)
Q Consensus 215 ------------~~~d~~g~TpLH~Aa~~g~~~iv~~Ll~~~~~~~vv~~Ll~~~~~~~~~in~~D~~GnTpLHlAa~~g 282 (507)
...+..|.||||+|+.+|+.++|++|++++ ..+|.+|.+|+||||+|+..|
T Consensus 181 ~~~~l~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g-----------------~d~~~~d~~g~tpL~~A~~~~ 243 (299)
T 1s70_B 181 ARQWLNSGHINDVRHAKSGGTALHVAAAKGYTEVLKLLIQAR-----------------YDVNIKDYDGWTPLHAAAHWG 243 (299)
T ss_dssp HHHHHHHTCCCCCCCTTTCCCHHHHHHHHTCHHHHHHHHTTT-----------------CCTTCCCTTCCCHHHHHHHTT
T ss_pred HHHHHhccCcchhhhcCCCCCHHHHHHHCCcHHHHHHHHHcC-----------------CCCCCcCCCCCcHHHHHHhcC
Confidence 125678999999999999999666666553 457999999999999999999
Q ss_pred CCcccccCchhhhhHHHHHHhhhhhccCCccccccccCCCCCccccccccccc
Q 039657 283 DHRPWLLPGAALQMQWEIKWYQFVKKSMPRHFFTRFNDNGKTPKEVFTETHKD 335 (507)
Q Consensus 283 ~~~~v~~~gaal~~~~el~w~~~v~~~~~~~~~~~~N~~G~Tpldl~~~~~~~ 335 (507)
+.+++++ .++ .+.+++.+|+.|+||++++.+...+
T Consensus 244 ~~~~v~~---------------Ll~---~gad~~~~d~~g~t~l~~A~~~~~~ 278 (299)
T 1s70_B 244 KEEACRI---------------LVE---NLCDMEAVNKVGQTAFDVADEDILG 278 (299)
T ss_dssp CHHHHHH---------------HHH---TTCCTTCCCTTSCCTTTSCCSGGGH
T ss_pred CHHHHHH---------------HHH---cCCCCCCcCCCCCCHHHHHHHHHHH
Confidence 9887632 111 2345678999999999999776443
No 17
>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A
Probab=99.89 E-value=2.9e-23 Score=196.74 Aligned_cols=134 Identities=9% Similarity=0.056 Sum_probs=106.3
Q ss_pred CCCCChHHHHHHHcCCHHHHHHHhhhCCcccccccCCCCcHHHHHHHcCC--------------cccCCCCCCccchhhh
Q 039657 165 TEKMDNKILLAAKIGVTEMVDRFLKSYPAVIQELNTSEKNLVLLTFEKKN--------------AQQSGRKETPMLIAAR 230 (507)
Q Consensus 165 d~~g~TpLh~Aa~~G~~~~v~~Ll~~~~~~~~~~d~~G~tpLh~A~~~~~--------------~~~d~~g~TpLH~Aa~ 230 (507)
|..|.||||+|+..|+.++++.|++.++..++..|.+|+||||+|+..++ +.+|.+|+||||+|+.
T Consensus 55 ~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~ 134 (223)
T 2f8y_A 55 DNMGRTPLHAAVSADAQGVFQILIRNRATDLDARMHDGTTPLILAARLAVEGMLEDLINSHADVNAVDDLGKSALHWAAA 134 (223)
T ss_dssp CTTSCCHHHHHHHTTCHHHHHHHHHBTTSCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTTCBCTTSCBHHHHHHH
T ss_pred CCCCCCHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCcHHHHHHHhCcHHHHHHHHHcCCCCcCcCCCCCcHHHHHHH
Confidence 56788999999999999999999998885558888999999999998887 6678889999999999
Q ss_pred cCCHHHHHHHHhhCCchHHHHHHHhcccccccccccccCCCCcHHHHHHhcCCCcccccCchhhhhHHHHHHhhhhhccC
Q 039657 231 MGVTEMVEQILDTFPANQYLQALLNRKILGESIFRQVDSQGNSALHLAAKFGDHRPWLLPGAALQMQWEIKWYQFVKKSM 310 (507)
Q Consensus 231 ~g~~~iv~~Ll~~~~~~~vv~~Ll~~~~~~~~~in~~D~~GnTpLHlAa~~g~~~~v~~~gaal~~~~el~w~~~v~~~~ 310 (507)
.|+.+++++|++++ ..++.+|..|+||||+|+..|+.++++. .++
T Consensus 135 ~~~~~~v~~Ll~~g-----------------~~~~~~~~~g~t~L~~A~~~~~~~~v~~---------------Ll~--- 179 (223)
T 2f8y_A 135 VNNVDAAVVLLKNG-----------------ANKDMQNNREETPLFLAAREGSYETAKV---------------LLD--- 179 (223)
T ss_dssp TTCHHHHHHHHHTT-----------------CCTTCCCTTCCCHHHHHHHHTCHHHHHH---------------HHH---
T ss_pred cCCHHHHHHHHHcC-----------------CCCCCcCCCCcCHHHHHHHcCCHHHHHH---------------HHH---
Confidence 99999666666553 4568889999999999999998776531 011
Q ss_pred CccccccccCCCCCccccccccc
Q 039657 311 PRHFFTRFNDNGKTPKEVFTETH 333 (507)
Q Consensus 311 ~~~~~~~~N~~G~Tpldl~~~~~ 333 (507)
...+.+.+|..|+||++++.+..
T Consensus 180 ~ga~~~~~~~~g~t~l~~A~~~~ 202 (223)
T 2f8y_A 180 HFANRDITDHMDRLPRDIAQERM 202 (223)
T ss_dssp TTCCTTCCCTTCCCHHHHHHHTT
T ss_pred cCCCCccccccCCCHHHHHHHhc
Confidence 12345678889999999887653
No 18
>4gpm_A Engineered protein OR264; de novo protein, structural genomics, PSI-biology, northeast structural genomics consortium, NESG; 2.00A {Synthetic construct} PDB: 4gmr_A
Probab=99.89 E-value=4.4e-23 Score=189.12 Aligned_cols=109 Identities=19% Similarity=0.231 Sum_probs=98.1
Q ss_pred ccCCCCCChHHHHHHHcCCHHHHHHHhhhCCcccccccCCCCcHHHHHHHcCC--------------cccCCCCCCccch
Q 039657 162 QSGTEKMDNKILLAAKIGVTEMVDRFLKSYPAVIQELNTSEKNLVLLTFEKKN--------------AQQSGRKETPMLI 227 (507)
Q Consensus 162 ~~~d~~g~TpLh~Aa~~G~~~~v~~Ll~~~~~~~~~~d~~G~tpLh~A~~~~~--------------~~~d~~g~TpLH~ 227 (507)
|.+|..|+||||+|+..|+.++++.|++.++++ +.+|.+|+||||+|+..|+ +.+|.+|+||||+
T Consensus 31 n~~d~~g~t~l~~a~~~~~~~~~~~ll~~gad~-~~~d~~g~TpLh~A~~~g~~~~v~~Ll~~gadvn~~d~~G~TpLh~ 109 (169)
T 4gpm_A 31 NASDSDGRTPLHHAAENGHKEVVKLLISKGADV-NAKDSDGRTPLHHAAENGHKEVVKLLISKGADVNAKDSDGRTPLHH 109 (169)
T ss_dssp TCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHH
T ss_pred CCcCCCCCCHHHHHHHcCCHHHHHHHHhcccch-hhhccCCCCHHHHHHHcCCHHHHHHHHHCcCCCCCCCCCCCCHHHH
Confidence 344778999999999999999999999999997 8999999999999999988 7899999999999
Q ss_pred hhhcCCHHHHHHHHhhCCchHHHHHHHhcccccccccccccCCCCcHHHHHHhcCCCcccc
Q 039657 228 AARMGVTEMVEQILDTFPANQYLQALLNRKILGESIFRQVDSQGNSALHLAAKFGDHRPWL 288 (507)
Q Consensus 228 Aa~~g~~~iv~~Ll~~~~~~~vv~~Ll~~~~~~~~~in~~D~~GnTpLHlAa~~g~~~~v~ 288 (507)
||.+|+.++|++|++++ +.++.+|.+|+||||+|++.|+.++++
T Consensus 110 A~~~g~~~~v~~Ll~~g-----------------ad~~~~d~~G~TpL~~A~~~g~~~iv~ 153 (169)
T 4gpm_A 110 AAENGHKEVVKLLISKG-----------------ADVNTSDSDGRTPLDLAREHGNEEVVK 153 (169)
T ss_dssp HHHTTCHHHHHHHHHTT-----------------CCTTCCCTTSCCHHHHHHHTTCHHHHH
T ss_pred HHHcCCHHHHHHHHHcC-----------------CCccccCCCCCCHHHHHHHcCCHHHHH
Confidence 99999999666666553 457999999999999999999988764
No 19
>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major}
Probab=99.89 E-value=1.7e-23 Score=213.96 Aligned_cols=206 Identities=14% Similarity=0.089 Sum_probs=151.8
Q ss_pred cccccCCCCcHHHHhhcCCCcccCCCCccchhhhhhccccCCCCCCCCCCCCCCchhhHHHHHHHHHHHHHHHhcCCchh
Q 039657 2 VNSVNENGLTPLHILASKPNAFESSSRLGLFDSIIYCCIDLSKKDDGEDQLFPPNYATCVLLFKVMMKAMLIVLGLGIWR 81 (507)
Q Consensus 2 v~~~D~~G~TPLh~lA~~p~~f~Sg~~l~~~~~~iy~~~~v~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~g~~~ 81 (507)
.+..|.+|.||||++|+ ..++..++.++-+...++..+... ..|.
T Consensus 13 ~~~~d~~g~t~L~~Aa~-------~g~~~~v~~Ll~~g~~~~~~d~~g--~t~L-------------------------- 57 (364)
T 3ljn_A 13 RIKSDDENMEKIHVAAR-------KGQTDEVRRLIETGVSPTIQNRFG--CTAL-------------------------- 57 (364)
T ss_dssp ---CCHHHHHHHHHHHH-------HTCHHHHHHHHHTTCCTTCCCTTC--CCHH--------------------------
T ss_pred ccccCCCCCCHHHHHHH-------cCCHHHHHHHHHcCCCccccCCCC--CcHH--------------------------
Confidence 46789999999999994 456777888887766554333111 1111
Q ss_pred hhHHHHHHHHHhhHHHHHHHHHHhhcccccccCCCCCCCCCCCCcccccccCCCCCCCCCccccccccccccccccCCCc
Q 039657 82 INHITEKKERHTWAIQVMCELVQHASLYKYEDNGPKRRNSGPKEDEEAFSVSETLPVPDTGEISHQNKSTNHKKIENGSA 161 (507)
Q Consensus 82 i~~i~~~k~~h~~a~~i~~~Ll~~~~~~~~~~~g~~~~~p~~~~d~~~~~~~~~~~~p~~~e~~~~~~~~~~~~~~~~~~ 161 (507)
.++....|. ++++.|++++... +
T Consensus 58 ---~~A~~~g~~---~~v~~Ll~~g~~~----~----------------------------------------------- 80 (364)
T 3ljn_A 58 ---HLACKFGCV---DTAKYLASVGEVH----S----------------------------------------------- 80 (364)
T ss_dssp ---HHHHHHCCH---HHHHHHHHHCCCC----C-----------------------------------------------
T ss_pred ---HHHHHcCCH---HHHHHHHHCCCCc----c-----------------------------------------------
Confidence 123333443 8899999996521 0
Q ss_pred ccCCCCCChHHHHHHHcCCHHHHHHHhhh----CCccccc-----------------ccCCCCcHHHHHHHcC--C----
Q 039657 162 QSGTEKMDNKILLAAKIGVTEMVDRFLKS----YPAVIQE-----------------LNTSEKNLVLLTFEKK--N---- 214 (507)
Q Consensus 162 ~~~d~~g~TpLh~Aa~~G~~~~v~~Ll~~----~~~~~~~-----------------~d~~G~tpLh~A~~~~--~---- 214 (507)
+..|.||||+|+..|+.++|+.|++. +.+. +. +|.+|+||||+|+..| +
T Consensus 81 ---~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~~~v 156 (364)
T 3ljn_A 81 ---LWHGQKPIHLAVMANKTDLVVALVEGAKERGQMP-ESLLNECDEREVNEIGSHVKHCKGQTALHWCVGLGPEYLEMI 156 (364)
T ss_dssp ---CBTTBCHHHHHHHTTCHHHHHHHHHHHHHHTCCH-HHHHTCCCCCCEEEETTEEEEESCCCHHHHHHHSCGGGHHHH
T ss_pred ---ccCCCCHHHHHHHcCCHHHHHHHHHhccccCCCH-HHHHhhcchHhhhhhccccCCCCCCCHHHHHHHcCCchHHHH
Confidence 22589999999999999999999998 6665 44 8889999999999999 5
Q ss_pred ----------cccCCCCCCccchhhhcCCHHHHHHHHhhCCchHHHHHHHhcccccccccccccCCCCcHHHHHHhcCCC
Q 039657 215 ----------AQQSGRKETPMLIAARMGVTEMVEQILDTFPANQYLQALLNRKILGESIFRQVDSQGNSALHLAAKFGDH 284 (507)
Q Consensus 215 ----------~~~d~~g~TpLH~Aa~~g~~~iv~~Ll~~~~~~~vv~~Ll~~~~~~~~~in~~D~~GnTpLHlAa~~g~~ 284 (507)
+.+|.+|+||||+|+.+|+.++|++|++++++ .....+|.+|..|+||||+|+..|+.
T Consensus 157 ~~Ll~~ga~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~------------~~~~~~~~~~~~g~t~L~~A~~~g~~ 224 (364)
T 3ljn_A 157 KILVQLGASPTAKDKADETPLMRAMEFRNREALDLMMDTVPS------------KSSLRLDYANKQGNSHLHWAILINWE 224 (364)
T ss_dssp HHHHHHTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHCSC------------SSSCCTTCCCTTCCCTTHHHHTTTCH
T ss_pred HHHHHcCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHhcccc------------cccccccccCCCCCcHHHHHHHcCCH
Confidence 67889999999999999999977777777554 11234889999999999999999998
Q ss_pred cccccCchhhhhHHHHHHhhhhhccCCccccccccCCCCCccccccccc
Q 039657 285 RPWLLPGAALQMQWEIKWYQFVKKSMPRHFFTRFNDNGKTPKEVFTETH 333 (507)
Q Consensus 285 ~~v~~~gaal~~~~el~w~~~v~~~~~~~~~~~~N~~G~Tpldl~~~~~ 333 (507)
+++++ .++ ...+++.+|.+|+||++++....
T Consensus 225 ~~v~~---------------Ll~---~gad~~~~d~~g~tpL~~A~~~g 255 (364)
T 3ljn_A 225 DVAMR---------------FVE---MGIDVNMEDNEHTVPLYLSVRAA 255 (364)
T ss_dssp HHHHH---------------HHT---TTCCTTCCCTTSCCHHHHHHHTC
T ss_pred HHHHH---------------HHH---cCCCCCCCCCCCCCHHHHHHHhC
Confidence 77632 111 24466789999999999987653
No 20
>2xai_A ASB-9, ankyrin repeat and SOCS box protein 9; transcription regulation, autoantibody; 2.58A {Homo sapiens}
Probab=99.89 E-value=4.3e-23 Score=201.54 Aligned_cols=132 Identities=16% Similarity=0.177 Sum_probs=105.1
Q ss_pred CCCChHHHHHHHcCCHHHHHHHhhhCCcccccccCCCCcHHHHHHHcCC-------------cccCCCCCCccchhhhcC
Q 039657 166 EKMDNKILLAAKIGVTEMVDRFLKSYPAVIQELNTSEKNLVLLTFEKKN-------------AQQSGRKETPMLIAARMG 232 (507)
Q Consensus 166 ~~g~TpLh~Aa~~G~~~~v~~Ll~~~~~~~~~~d~~G~tpLh~A~~~~~-------------~~~d~~g~TpLH~Aa~~g 232 (507)
..|.||||+|+..|+.++++.|++.++++ +.+|.+|+||||+|+..++ -..|.+|+||||+|+.+|
T Consensus 99 ~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~g~t~Lh~A~~~~ 177 (261)
T 2xai_A 99 SDLASPIHEAARRGHVECVNSLIAYGGNI-DHKISHLGTPLYLACENQQRACVKKLLESGADVNQGKGQDSPLHAVARTA 177 (261)
T ss_dssp CTTCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCBTTTBCHHHHHHHTTCHHHHHHHHHHTCCTTCCBTTBCHHHHHHHHT
T ss_pred CCCCCHHHHHHHcCcHHHHHHHHHcCCCC-CcCCCCCCCHHHHHHHhCCHHHHHHHHHcCCCCCCCCCCCChHHHHHHcC
Confidence 35899999999999999999999999997 8899999999999999987 125889999999999999
Q ss_pred CHHHHHHHHhhCCchHHHHHHHhcccccccccccccCCCCcHHHHHHhcCCCcccccCchhhhhHHHHHHhhhhhccCCc
Q 039657 233 VTEMVEQILDTFPANQYLQALLNRKILGESIFRQVDSQGNSALHLAAKFGDHRPWLLPGAALQMQWEIKWYQFVKKSMPR 312 (507)
Q Consensus 233 ~~~iv~~Ll~~~~~~~vv~~Ll~~~~~~~~~in~~D~~GnTpLHlAa~~g~~~~v~~~gaal~~~~el~w~~~v~~~~~~ 312 (507)
+.++|++|++. | ++++.+|.+|+||||+|+..++ ++++ .++...++
T Consensus 178 ~~~~v~~Ll~~-------------g----ad~~~~d~~g~tpl~~A~~~~~--~~~~---------------ll~~~~~~ 223 (261)
T 2xai_A 178 SEELACLLMDF-------------G----ADTQAKNAEGKRPVELVPPESP--LAQL---------------FLEREGPP 223 (261)
T ss_dssp CHHHHHHHHHT-------------T----CCTTCCCTTSCCGGGGSCTTCT--HHHH---------------HHHC-CCC
T ss_pred CHHHHHHHHHc-------------C----CCCCCcCCCCCChhhhcccccc--HHHH---------------HHhccCCc
Confidence 99966666655 3 4579999999999999996654 3211 00111111
Q ss_pred -----cccccccCCCCCcccccccc
Q 039657 313 -----HFFTRFNDNGKTPKEVFTET 332 (507)
Q Consensus 313 -----~~~~~~N~~G~Tpldl~~~~ 332 (507)
.....+|..|+||++++.+.
T Consensus 224 ~l~~~~~~~~r~~~g~t~l~~~~~~ 248 (261)
T 2xai_A 224 SLMQLCRLRIRKCFGIQQHHKITKL 248 (261)
T ss_dssp CHHHHHHHHHHTTSCTTCGGGGGGS
T ss_pred cHHHHHHHHHHHHhchhccccCccc
Confidence 23468899999999988654
No 21
>1sw6_A Regulatory protein SWI6; transcription regulation, ankyrin repeats, cell-cycle; 2.10A {Saccharomyces cerevisiae} SCOP: d.211.1.1
Probab=99.89 E-value=1.8e-23 Score=211.64 Aligned_cols=143 Identities=15% Similarity=0.133 Sum_probs=119.1
Q ss_pred CCCCCChHHHHHHHcCCHHHHHHHhhhCCcccccccCCCCcHHHHHHHcCC------------------cccCCCCCCcc
Q 039657 164 GTEKMDNKILLAAKIGVTEMVDRFLKSYPAVIQELNTSEKNLVLLTFEKKN------------------AQQSGRKETPM 225 (507)
Q Consensus 164 ~d~~g~TpLh~Aa~~G~~~~v~~Ll~~~~~~~~~~d~~G~tpLh~A~~~~~------------------~~~d~~g~TpL 225 (507)
+|..|+||||+||..|+.++|+.|++.++++ +.+|.+|+||||+|+..|+ +.+|.+|+|||
T Consensus 127 ~d~~g~TpLh~Aa~~g~~~~v~~Ll~~Gad~-n~~d~~g~TpLh~A~~~g~~~~~~~~~~ll~~~~~~~~~~d~~g~tpL 205 (327)
T 1sw6_A 127 VDEHGNTPLHWLTSIANLELVKHLVKHGSNR-LYGDNMGESCLVKAVKSVNNYDSGTFEALLDYLYPCLILEDSMNRTIL 205 (327)
T ss_dssp CSTTCCCHHHHHHHTTCHHHHHHHHHTTCCT-TBCCTTCCCHHHHHHHSSHHHHTTCHHHHHHHHGGGGGEECTTCCCHH
T ss_pred cCCCCCcHHHHHHHcCCHHHHHHHHHcCCCC-CCcCCCCCCHHHHHHHhcccccHHHHHHHHHhhhccccCCCCCCCCHH
Confidence 4778999999999999999999999999998 8999999999999999753 67899999999
Q ss_pred chhhh----cCCHHHHHHHHhhCC--------------------c--------------hHHHHHHHhcccccccccccc
Q 039657 226 LIAAR----MGVTEMVEQILDTFP--------------------A--------------NQYLQALLNRKILGESIFRQV 267 (507)
Q Consensus 226 H~Aa~----~g~~~iv~~Ll~~~~--------------------~--------------~~vv~~Ll~~~~~~~~~in~~ 267 (507)
|+|+. .|+.++|+.|++... + ...+++|++. .+|.+
T Consensus 206 h~A~~~~~~~g~~~~v~~Ll~~~~~~~~~~~~~~i~~~~~~~g~~~~~~~~~g~t~L~~a~~~~~Ll~~------~~n~~ 279 (327)
T 1sw6_A 206 HHIIITSGMTGCSAAAKYYLDILMGWIVKKQNRPIQSGTNEKESKPNDKNGERKDSILENLDLKWIIAN------MLNAQ 279 (327)
T ss_dssp HHHHHHHTSTTCHHHHHHHHHHHHHHHHHGGGCCEEEC----------------CHHHHHCSHHHHHHH------TTTCC
T ss_pred HHHHHHccccccHHHHHHHHHHHHHHHhcccchHHHhhhhcccCCcccccccCCChhHHHHHHHHHHHh------CCCCC
Confidence 99999 999999999998732 1 0014555544 37999
Q ss_pred cCCCCcHHHHHHhcCCCcccccCchhhhhHHHHHHhhhhhccCCccccccccCCCCCccccccc
Q 039657 268 DSQGNSALHLAAKFGDHRPWLLPGAALQMQWEIKWYQFVKKSMPRHFFTRFNDNGKTPKEVFTE 331 (507)
Q Consensus 268 D~~GnTpLHlAa~~g~~~~v~~~gaal~~~~el~w~~~v~~~~~~~~~~~~N~~G~Tpldl~~~ 331 (507)
|.+|+||||+|+..|+.+++++ .++ .+.+++.+|++|+||++++..
T Consensus 280 d~~G~TpLh~A~~~g~~~~v~~---------------Ll~---~Gad~~~~d~~G~TpL~~A~~ 325 (327)
T 1sw6_A 280 DSNGDTCLNIAARLGNISIVDA---------------LLD---YGADPFIANKSGLRPVDFGAG 325 (327)
T ss_dssp CTTSCCHHHHHHHHCCHHHHHH---------------HHH---TTCCTTCCCTTSCCGGGGTCC
T ss_pred CCCCCCHHHHHHHcCCHHHHHH---------------HHH---cCCCCcccCCCCCCHHHHHHh
Confidence 9999999999999999887642 111 244678999999999999864
No 22
>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium}
Probab=99.88 E-value=5e-23 Score=191.18 Aligned_cols=106 Identities=19% Similarity=0.220 Sum_probs=93.7
Q ss_pred CCCCChHHHHHHHcCCHHHHHHHhhhCCcccccccCCCCcHHHHHHHcCC--------------cccCCCCCCccchhhh
Q 039657 165 TEKMDNKILLAAKIGVTEMVDRFLKSYPAVIQELNTSEKNLVLLTFEKKN--------------AQQSGRKETPMLIAAR 230 (507)
Q Consensus 165 d~~g~TpLh~Aa~~G~~~~v~~Ll~~~~~~~~~~d~~G~tpLh~A~~~~~--------------~~~d~~g~TpLH~Aa~ 230 (507)
|..|+||||+|+..|+.++++.|++.++++ +.+|..|+||||+|+..++ +.+|.+|+||||+|+.
T Consensus 65 ~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~ 143 (192)
T 2rfm_A 65 DIEGSTALIWAVKNNRLGIAEKLLSKGSNV-NTKDFSGKTPLMWSIIFGYSEMSYFLLEHGANVNDRNLEGETPLIVASK 143 (192)
T ss_dssp CTTSCCHHHHHHHTTCHHHHHHHHHHTCCT-TCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSSCCCTTCCCHHHHHHH
T ss_pred cccCccHHHHHHHcCCHHHHHHHHHCCCCC-CCCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHH
Confidence 567999999999999999999999999987 8889999999999998887 6789999999999999
Q ss_pred cCCHHHHHHHHhhCCchHHHHHHHhcccccccccccccCCCCcHHHHHHhcCCCcccc
Q 039657 231 MGVTEMVEQILDTFPANQYLQALLNRKILGESIFRQVDSQGNSALHLAAKFGDHRPWL 288 (507)
Q Consensus 231 ~g~~~iv~~Ll~~~~~~~vv~~Ll~~~~~~~~~in~~D~~GnTpLHlAa~~g~~~~v~ 288 (507)
.|+.++|++|++++ +.++.+|..|+||||+|+..|+.++++
T Consensus 144 ~~~~~~v~~Ll~~g-----------------a~~~~~~~~g~t~l~~A~~~~~~~~v~ 184 (192)
T 2rfm_A 144 YGRSEIVKKLLELG-----------------ADISARDLTGLTAEASARIFGRQEVIK 184 (192)
T ss_dssp HTCHHHHHHHHHTT-----------------CCTTCBCTTSCBHHHHHHHTTCHHHHH
T ss_pred cCCHHHHHHHHHCC-----------------CCCCCcCCCCCCHHHHHHHhCcHHHHH
Confidence 99999666666553 457899999999999999999988763
No 23
>4g8k_A 2-5A-dependent ribonuclease; ankyrin-repeat domain, single-stranded RNA, hydrolase; 2.40A {Homo sapiens} PDB: 4g8l_A*
Probab=99.88 E-value=1.1e-22 Score=205.64 Aligned_cols=146 Identities=15% Similarity=0.087 Sum_probs=117.6
Q ss_pred CCCChHHHHHHHcCCHHHHHHHhhhCCcc--------------------------------cccccCCCCcHHHHHHHcC
Q 039657 166 EKMDNKILLAAKIGVTEMVDRFLKSYPAV--------------------------------IQELNTSEKNLVLLTFEKK 213 (507)
Q Consensus 166 ~~g~TpLh~Aa~~G~~~~v~~Ll~~~~~~--------------------------------~~~~d~~G~tpLh~A~~~~ 213 (507)
+.|+||||+||..|+.++|+.||++++++ ++.+|..|+||||+|+..+
T Consensus 57 ~~g~TpLh~A~~~g~~~iv~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~g~t~l~~A~~~~ 136 (337)
T 4g8k_A 57 EGGWTPLHNAVQMSREDIVELLLRHGADPVLRKKNGATPFILAAIAGSVKLLKLFLSKGADVNECDFYGFTAFMEAAVYG 136 (337)
T ss_dssp TTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHTTTCCTTCBCTTCCBHHHHHHHTT
T ss_pred CCCcCHHHHHHHcCCHHHHHHHHHcCCchhhhccCCCchhHHHHhcccchhhHHhhhccchhhhhccCCCCHHHHHHHcC
Confidence 35899999999999999999999987654 2567888999999999888
Q ss_pred C------------------------cccCCCCCCccchhhhcCCHHHHHHHHhh-CCc----------------------
Q 039657 214 N------------------------AQQSGRKETPMLIAARMGVTEMVEQILDT-FPA---------------------- 246 (507)
Q Consensus 214 ~------------------------~~~d~~g~TpLH~Aa~~g~~~iv~~Ll~~-~~~---------------------- 246 (507)
+ ...+..|.||||+|+.+|+.++|++||++ +.+
T Consensus 137 ~~~~~~~ll~~ga~~~~~~~~~~~~~~~~~~g~T~L~~A~~~g~~~~v~~LL~~~gad~n~~d~~g~t~l~~~~~~~~~~ 216 (337)
T 4g8k_A 137 KVKALKFLYKRGANVNLRRKTKEDQERLRKGGATALMDAAEKGHVEVLKILLDEMGADVNACDNMGRNALIHALLSSDDS 216 (337)
T ss_dssp CHHHHHHHHHTTCCTTCCCCCC-----CTTCSCCHHHHHHHHTCHHHHHHHHHHSCCCTTCCCTTSCCHHHHHHHHSCTT
T ss_pred cHHHHHHHHHcCCCcchhhccccccccccCCCCcHHHHHHHCCCHHHHHHHHhccCCCcCccCCCCCcHHHHHHHHcCcc
Confidence 6 23567799999999999999999999975 333
Q ss_pred --hHHHHHHHhcccccccccccccCCCCcHHHHHHhcCCCcccccCchhhhhHHHHHHhhhhhccCCccccccccCCCCC
Q 039657 247 --NQYLQALLNRKILGESIFRQVDSQGNSALHLAAKFGDHRPWLLPGAALQMQWEIKWYQFVKKSMPRHFFTRFNDNGKT 324 (507)
Q Consensus 247 --~~vv~~Ll~~~~~~~~~in~~D~~GnTpLHlAa~~g~~~~v~~~gaal~~~~el~w~~~v~~~~~~~~~~~~N~~G~T 324 (507)
..++++|++.| +.+|.+|.+|+||||+|+..|+.++++. + ......+++.+|++|+|
T Consensus 217 ~~~~i~~lLl~~g----ad~n~~d~~g~t~L~~a~~~~~~~~v~~----------------L-l~~~~~~vn~~d~~G~T 275 (337)
T 4g8k_A 217 DVEAITHLLLDHG----ADVNVRGERGKTPLILAVEKKHLGLVQR----------------L-LEQEHIEINDTDSDGKT 275 (337)
T ss_dssp THHHHHHHHHHTT----CCTTCCCGGGCCHHHHHHHTTCHHHHHH----------------H-HTSTTCCTTCBCTTSCB
T ss_pred cHHHHHHHHHHCC----CCCCCcCCCCCCHHHHHHHhhhhHHHHH----------------H-HHhcCCcccCcCCCCCC
Confidence 13578888888 7899999999999999999998776521 0 01134467899999999
Q ss_pred cccccccc
Q 039657 325 PKEVFTET 332 (507)
Q Consensus 325 pldl~~~~ 332 (507)
|++++.+.
T Consensus 276 pL~~A~~~ 283 (337)
T 4g8k_A 276 ALLLAVEL 283 (337)
T ss_dssp HHHHHHHT
T ss_pred HHHHHHHc
Confidence 99998655
No 24
>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A
Probab=99.88 E-value=2e-22 Score=195.69 Aligned_cols=108 Identities=23% Similarity=0.295 Sum_probs=96.8
Q ss_pred cCCCCCChHHHHHHHcCCHHHHHHHhhhCCcccccccCCCCcHHHHHHHcCC--------------cccCCCCCCccchh
Q 039657 163 SGTEKMDNKILLAAKIGVTEMVDRFLKSYPAVIQELNTSEKNLVLLTFEKKN--------------AQQSGRKETPMLIA 228 (507)
Q Consensus 163 ~~d~~g~TpLh~Aa~~G~~~~v~~Ll~~~~~~~~~~d~~G~tpLh~A~~~~~--------------~~~d~~g~TpLH~A 228 (507)
..+..|.||||+|+..|+.++++.|++.++++ +.+|.+|+||||+|+..++ +.+|.+|+||||+|
T Consensus 119 ~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~tpL~~A 197 (253)
T 1yyh_A 119 ARMHDGTTPLILAARLAVEGMLEDLINSHADV-NAVDDLGKSALHWAAAVNNVDAAVVLLKNGANKDMQNNREETPLFLA 197 (253)
T ss_dssp CCCTTCCCHHHHHHHHTCSSHHHHHHHTTCCT-TCBCTTSCBHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHH
T ss_pred ccCCCCCcHHHHHHHcChHHHHHHHHHcCCCC-CCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHH
Confidence 34667999999999999999999999999997 8999999999999999887 68899999999999
Q ss_pred hhcCCHHHHHHHHhhCCchHHHHHHHhcccccccccccccCCCCcHHHHHHhcCCCcccc
Q 039657 229 ARMGVTEMVEQILDTFPANQYLQALLNRKILGESIFRQVDSQGNSALHLAAKFGDHRPWL 288 (507)
Q Consensus 229 a~~g~~~iv~~Ll~~~~~~~vv~~Ll~~~~~~~~~in~~D~~GnTpLHlAa~~g~~~~v~ 288 (507)
+.+|+.++|++|+++++ .++.+|..|+||||+|++.|+.+++.
T Consensus 198 ~~~~~~~~v~~Ll~~ga-----------------~~~~~d~~g~tpl~~A~~~g~~~i~~ 240 (253)
T 1yyh_A 198 AREGSYETAKVLLDHFA-----------------NRDITDHMDRLPRDIAQERMHHDIVR 240 (253)
T ss_dssp HHHTCHHHHHHHHHTTC-----------------CTTCCCTTCCCHHHHHHHTTCHHHHH
T ss_pred HHCCCHHHHHHHHHcCC-----------------CccccccCCCCHHHHHHHcCCHHHHH
Confidence 99999996666666544 57899999999999999999988763
No 25
>2rfa_A Transient receptor potential cation channel subfa member 6; TRPV6, ankyrin reapeat, ANK RE calcium channel, calcium transport, calmodulin-binding; 1.70A {Mus musculus}
Probab=99.87 E-value=1.2e-21 Score=186.76 Aligned_cols=116 Identities=16% Similarity=0.024 Sum_probs=94.0
Q ss_pred cCCCCCChHHHHHHHcCCHHHHHHHhhhCCcccccccC-------------CCCcHHHHHHHcCC--------------c
Q 039657 163 SGTEKMDNKILLAAKIGVTEMVDRFLKSYPAVIQELNT-------------SEKNLVLLTFEKKN--------------A 215 (507)
Q Consensus 163 ~~d~~g~TpLh~Aa~~G~~~~v~~Ll~~~~~~~~~~d~-------------~G~tpLh~A~~~~~--------------~ 215 (507)
..|..|.||||+|+..|+.++++.|++.++++ +..+. +|+||||+|+..++ +
T Consensus 70 ~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~ 148 (232)
T 2rfa_A 70 SELYEGQTALHIAVINQNVNLVRALLARGASV-SARATGSVFHYRPHNLIYYGEHPLSFAACVGSEEIVRLLIEHGADIR 148 (232)
T ss_dssp STTTTTCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCCSGGGSCCTTCSCCCCSSHHHHHHHHTCHHHHHHHHHTTCCTT
T ss_pred ccCCCCcCHHHHHHHcCCHHHHHHHHhCCCCC-CcccCCcceeecccccccCCCCHHHHHHHcCCHHHHHHHHHCCCCCC
Confidence 34668999999999999999999999999987 55554 79999999999987 6
Q ss_pred ccCCCCCCccchhhhcCCHHHHHHHHhhCCchHHHHHHHhcccc--cccccccccCCCCcHHHHHHhcCCCcccc
Q 039657 216 QQSGRKETPMLIAARMGVTEMVEQILDTFPANQYLQALLNRKIL--GESIFRQVDSQGNSALHLAAKFGDHRPWL 288 (507)
Q Consensus 216 ~~d~~g~TpLH~Aa~~g~~~iv~~Ll~~~~~~~vv~~Ll~~~~~--~~~~in~~D~~GnTpLHlAa~~g~~~~v~ 288 (507)
.+|.+|+||||+|+.+|+.++++. ++++|++.+.. .....+.+|..|+||||+|+..|+.++++
T Consensus 149 ~~d~~g~t~L~~A~~~~~~~~~~~---------i~~~Ll~~g~~~~~~~~~~~~~~~g~tpl~~A~~~g~~~~v~ 214 (232)
T 2rfa_A 149 AQDSLGNTVLHILILQPNKTFACQ---------MYNLLLSYDGGDHLKSLELVPNNQGLTPFKLAGVEGNIVMFQ 214 (232)
T ss_dssp CCCTTSCCHHHHHHTCSCHHHHHH---------HHHHHHHTTCSCSSCCGGGCCCTTSCCHHHHHHHHTCHHHHH
T ss_pred CCCCCCCCHHHHHHHcCChHHHHH---------HHHHHHhcCCchhhhhhhccCCCCCCCHHHHHHHcCCHHHHH
Confidence 789999999999999999997732 22344444310 01233789999999999999999988764
No 26
>4gpm_A Engineered protein OR264; de novo protein, structural genomics, PSI-biology, northeast structural genomics consortium, NESG; 2.00A {Synthetic construct} PDB: 4gmr_A
Probab=99.87 E-value=1.6e-22 Score=185.36 Aligned_cols=128 Identities=20% Similarity=0.278 Sum_probs=110.1
Q ss_pred hHHHHHHHcCCHHHHHHHhhhCCcccccccCCCCcHHHHHHHcCC--------------cccCCCCCCccchhhhcCCHH
Q 039657 170 NKILLAAKIGVTEMVDRFLKSYPAVIQELNTSEKNLVLLTFEKKN--------------AQQSGRKETPMLIAARMGVTE 235 (507)
Q Consensus 170 TpLh~Aa~~G~~~~v~~Ll~~~~~~~~~~d~~G~tpLh~A~~~~~--------------~~~d~~g~TpLH~Aa~~g~~~ 235 (507)
++|+.||+.|+.++|+.||+.++++ +.+|.+|+||||+|+..++ +.+|.+|+||||+|+.+|+.+
T Consensus 6 ~~L~~Aa~~G~~~~v~~Ll~~Gadv-n~~d~~g~t~l~~a~~~~~~~~~~~ll~~gad~~~~d~~g~TpLh~A~~~g~~~ 84 (169)
T 4gpm_A 6 KRLIEAAENGNKDRVKDLIENGADV-NASDSDGRTPLHHAAENGHKEVVKLLISKGADVNAKDSDGRTPLHHAAENGHKE 84 (169)
T ss_dssp HHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHH
T ss_pred HHHHHHHHcCCHHHHHHHHHCCCCC-CCcCCCCCCHHHHHHHcCCHHHHHHHHhcccchhhhccCCCCHHHHHHHcCCHH
Confidence 5799999999999999999999997 8999999999999999987 788999999999999999999
Q ss_pred HHHHHHhhCCchHHHHHHHhcccccccccccccCCCCcHHHHHHhcCCCcccccCchhhhhHHHHHHhhhhhccCCcccc
Q 039657 236 MVEQILDTFPANQYLQALLNRKILGESIFRQVDSQGNSALHLAAKFGDHRPWLLPGAALQMQWEIKWYQFVKKSMPRHFF 315 (507)
Q Consensus 236 iv~~Ll~~~~~~~vv~~Ll~~~~~~~~~in~~D~~GnTpLHlAa~~g~~~~v~~~gaal~~~~el~w~~~v~~~~~~~~~ 315 (507)
+|++|++++ +.+|.+|.+|+||||+|+..|+.+++++ .++ ...++
T Consensus 85 ~v~~Ll~~g-----------------advn~~d~~G~TpLh~A~~~g~~~~v~~---------------Ll~---~gad~ 129 (169)
T 4gpm_A 85 VVKLLISKG-----------------ADVNAKDSDGRTPLHHAAENGHKEVVKL---------------LIS---KGADV 129 (169)
T ss_dssp HHHHHHHTT-----------------CCTTCCCTTSCCHHHHHHHTTCHHHHHH---------------HHH---TTCCT
T ss_pred HHHHHHHCc-----------------CCCCCCCCCCCCHHHHHHHcCCHHHHHH---------------HHH---cCCCc
Confidence 666666553 4579999999999999999999887642 111 23456
Q ss_pred ccccCCCCCccccccccc
Q 039657 316 TRFNDNGKTPKEVFTETH 333 (507)
Q Consensus 316 ~~~N~~G~Tpldl~~~~~ 333 (507)
+.+|++|+||++++....
T Consensus 130 ~~~d~~G~TpL~~A~~~g 147 (169)
T 4gpm_A 130 NTSDSDGRTPLDLAREHG 147 (169)
T ss_dssp TCCCTTSCCHHHHHHHTT
T ss_pred cccCCCCCCHHHHHHHcC
Confidence 789999999999987653
No 27
>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens}
Probab=99.87 E-value=5.7e-22 Score=188.84 Aligned_cols=132 Identities=16% Similarity=0.125 Sum_probs=102.6
Q ss_pred CCCChHHHHHHHcCCHHHHHHHhhhCCcccccccCCCCcHHHHHHHcCC--------------cccCCCCCCccchhhhc
Q 039657 166 EKMDNKILLAAKIGVTEMVDRFLKSYPAVIQELNTSEKNLVLLTFEKKN--------------AQQSGRKETPMLIAARM 231 (507)
Q Consensus 166 ~~g~TpLh~Aa~~G~~~~v~~Ll~~~~~~~~~~d~~G~tpLh~A~~~~~--------------~~~d~~g~TpLH~Aa~~ 231 (507)
..|.||||+|+..|+.++++.|++.++++ +.+|..|+||||+|+..++ +.+|.+|.||||+|+..
T Consensus 74 ~~~~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~g~t~l~~a~~~ 152 (240)
T 3eu9_A 74 DLNSTPLHWATRQGHLSMVVQLMKYGADP-SLIDGEGCSCIHLAAQFGHTSIVAYLIAKGQDVDMMDQNGMTPLMWAAYR 152 (240)
T ss_dssp TTTBCHHHHHHHHTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHH
T ss_pred CcCCChhHHHHHcCCHHHHHHHHHcCCCC-cccCCCCCCHHHHHHHcCHHHHHHHHHhcCCCccccCCCCCcHHHHHHHh
Confidence 35889999999999999999999888887 7788888999999888877 56788888999998866
Q ss_pred CC-HHHHHHHHhhCCchHHHHHHHhcccccccccccccC-CCCcHHHHHHhcCCCcccccCchhhhhHHHHHHhhhhhcc
Q 039657 232 GV-TEMVEQILDTFPANQYLQALLNRKILGESIFRQVDS-QGNSALHLAAKFGDHRPWLLPGAALQMQWEIKWYQFVKKS 309 (507)
Q Consensus 232 g~-~~iv~~Ll~~~~~~~vv~~Ll~~~~~~~~~in~~D~-~GnTpLHlAa~~g~~~~v~~~gaal~~~~el~w~~~v~~~ 309 (507)
|+ .+++++|++ .+ ..++.+|. .|+||||+|+..|+.++++. + ++.
T Consensus 153 ~~~~~~~~~L~~-------------~~----~~~~~~~~~~g~t~L~~A~~~~~~~~v~~-------------L--l~~- 199 (240)
T 3eu9_A 153 THSVDPTRLLLT-------------FN----VSVNLGDKYHKNTALHWAVLAGNTTVISL-------------L--LEA- 199 (240)
T ss_dssp CCSSTTHHHHHH-------------TT----CCTTCCCTTTCCCHHHHHHHHTCHHHHHH-------------H--HHH-
T ss_pred CChHHHHHHHHh-------------cC----CCcchhhccCCCcHHHHHHHcCCHHHHHH-------------H--HHc-
Confidence 66 674444444 44 45788887 99999999999999776531 1 111
Q ss_pred CCccccccccCCCCCccccccccc
Q 039657 310 MPRHFFTRFNDNGKTPKEVFTETH 333 (507)
Q Consensus 310 ~~~~~~~~~N~~G~Tpldl~~~~~ 333 (507)
+.+.+.+|.+|+||++++.+..
T Consensus 200 --g~~~~~~~~~g~t~l~~A~~~~ 221 (240)
T 3eu9_A 200 --GANVDAQNIKGESALDLAKQRK 221 (240)
T ss_dssp --TCCTTCBCTTSCBHHHHHHHTT
T ss_pred --CCCCCCcCCCCCCHHHHHHHcC
Confidence 3456789999999999987663
No 28
>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A
Probab=99.86 E-value=3.1e-22 Score=191.49 Aligned_cols=110 Identities=11% Similarity=0.081 Sum_probs=96.7
Q ss_pred cccCCCCCChHHHHHHHcCCHHHHHHHhhhCCccccccc-CCCCcHHHHHHHcCC--------------cccCCCCCCcc
Q 039657 161 AQSGTEKMDNKILLAAKIGVTEMVDRFLKSYPAVIQELN-TSEKNLVLLTFEKKN--------------AQQSGRKETPM 225 (507)
Q Consensus 161 ~~~~d~~g~TpLh~Aa~~G~~~~v~~Ll~~~~~~~~~~d-~~G~tpLh~A~~~~~--------------~~~d~~g~TpL 225 (507)
.+..|..|.||||+|+..|+.++++.|++.++++ +..| ..|+||||+|+..++ +.+|.+|+|||
T Consensus 109 ~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~-~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L 187 (241)
T 1k1a_A 109 LEARNYDGLTALHVAVNTECQETVQLLLERGADI-DAVDIKSGRSPLIHAVENNSLSMVQLLLQHGANVNAQMYSGSSAL 187 (241)
T ss_dssp TTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCT-TCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCBCTTSCBHH
T ss_pred ccccCcCCCcHHHHHHHcCCHHHHHHHHHcCCCc-ccccccCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHH
Confidence 3556788999999999999999999999999998 6666 899999999999987 67899999999
Q ss_pred chhhhcCCHHHHHHHHhhCCchHHHHHHHhcccccccccccccCCCCcHHHHHHhcCCCcccc
Q 039657 226 LIAARMGVTEMVEQILDTFPANQYLQALLNRKILGESIFRQVDSQGNSALHLAAKFGDHRPWL 288 (507)
Q Consensus 226 H~Aa~~g~~~iv~~Ll~~~~~~~vv~~Ll~~~~~~~~~in~~D~~GnTpLHlAa~~g~~~~v~ 288 (507)
|+|+.+|+.+++++|++++ +.++.+|..|+||||+|+..|+.++++
T Consensus 188 ~~A~~~~~~~~v~~Ll~~g-----------------a~~~~~~~~g~tpl~~A~~~~~~~i~~ 233 (241)
T 1k1a_A 188 HSASGRGLLPLVRTLVRSG-----------------ADSSLKNCHNDTPLMVARSRRVIDILR 233 (241)
T ss_dssp HHHHHHTCHHHHHHHHHTT-----------------CCTTCCCTTSCCTTTTCSSHHHHHHHT
T ss_pred HHHHHcCCHHHHHHHHhcC-----------------CCCCCcCCCCCCHHHHHHhcCcHHHHh
Confidence 9999999999666666553 457899999999999999999877764
No 29
>4b93_B Ankyrin repeat domain-containing protein 27; endocytosis, exocytosis, snare; 2.00A {Homo sapiens}
Probab=99.86 E-value=3.7e-22 Score=196.61 Aligned_cols=101 Identities=14% Similarity=0.109 Sum_probs=91.3
Q ss_pred CCCCChHHHHHHHcCCHHHHHHHhhhCCcccccccCCCCcHHHHHHHcCC--------------cccCCCCCCccchhhh
Q 039657 165 TEKMDNKILLAAKIGVTEMVDRFLKSYPAVIQELNTSEKNLVLLTFEKKN--------------AQQSGRKETPMLIAAR 230 (507)
Q Consensus 165 d~~g~TpLh~Aa~~G~~~~v~~Ll~~~~~~~~~~d~~G~tpLh~A~~~~~--------------~~~d~~g~TpLH~Aa~ 230 (507)
+..|.||+|+|+..|+.++++.|++.++++ +.+|.+|+||||+||..|+ +.+|.+|+||||+||.
T Consensus 116 ~~~g~t~l~~a~~~~~~~~~~~Ll~~g~~~-n~~d~~g~TpL~~A~~~g~~~~v~~Ll~~gadvn~~~~~g~t~Lh~A~~ 194 (269)
T 4b93_B 116 NADQAVPLHLACQQGHFQVVKCLLDSNAKP-NKKDLSGNTPLIYACSGGHHELVALLLQHGASINASNNKGNTALHEAVI 194 (269)
T ss_dssp CTTCCCHHHHHHHHTCHHHHHHHHHTTCCS-CCCCTTCCCHHHHHHHTTCGGGHHHHHHTTCCTTCBCTTSCBHHHHHHH
T ss_pred CCCCCCccccccccChHHHHHHHHHCCCCC-CCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCccccCCCcHHHHHHH
Confidence 567999999999999999999999999997 8999999999999999987 7889999999999999
Q ss_pred cCCHHHHHHHHhhCCchHHHHHHHhcccccccccccccCCCCcHHHHHHhcCC
Q 039657 231 MGVTEMVEQILDTFPANQYLQALLNRKILGESIFRQVDSQGNSALHLAAKFGD 283 (507)
Q Consensus 231 ~g~~~iv~~Ll~~~~~~~vv~~Ll~~~~~~~~~in~~D~~GnTpLHlAa~~g~ 283 (507)
+|+.++|++|++++ +++|.+|.+|+||||+|+++++
T Consensus 195 ~g~~~~v~~Ll~~G-----------------ad~~~~d~~G~TpL~~A~~~~~ 230 (269)
T 4b93_B 195 EKHVFVVELLLLHG-----------------ASVQVLNKRQRTAVDCAEQNSK 230 (269)
T ss_dssp TTCHHHHHHHHHTT-----------------CCSCCCCTTSCCSGGGSCTTCH
T ss_pred cCCHHHHHHHHHCC-----------------CCCCCcCCCCCCHHHHHHhCCc
Confidence 99999666666553 4579999999999999998775
No 30
>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A*
Probab=99.86 E-value=1.4e-21 Score=186.90 Aligned_cols=104 Identities=14% Similarity=0.078 Sum_probs=92.9
Q ss_pred CCCCCChHHHHHHHcCCHHHHHHHhhhCCcccccccCCCCcHHHHHHHcCC--------------cccCCCCCCccchhh
Q 039657 164 GTEKMDNKILLAAKIGVTEMVDRFLKSYPAVIQELNTSEKNLVLLTFEKKN--------------AQQSGRKETPMLIAA 229 (507)
Q Consensus 164 ~d~~g~TpLh~Aa~~G~~~~v~~Ll~~~~~~~~~~d~~G~tpLh~A~~~~~--------------~~~d~~g~TpLH~Aa 229 (507)
.+..|.||||+|+..|+.++++.|++.++++ +.+|.+|+||||+|+..++ +.+|..|.||||+|+
T Consensus 107 ~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~ 185 (237)
T 3b7b_A 107 QDDGGWTPMIWATEYKHVDLVKLLLSKGSDI-NIRDNEENICLHWAAFSGCVDIAEILLAAKCDLHAVNIHGDSPLHIAA 185 (237)
T ss_dssp CCTTSCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHHCCHHHHHHHHTTTCCTTCCCTTCCCHHHHHH
T ss_pred CCCCCCCHHHHHHHcCCHHHHHHHHHCCCCC-CccCCCCCCHHHHHHHCCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHH
Confidence 3667999999999999999999999999997 8899999999999999987 678899999999999
Q ss_pred hcCCHHHHHHHHhhCCchHHHHHHHhcccccccccccccCCCCcHHHHHHhcCCCc
Q 039657 230 RMGVTEMVEQILDTFPANQYLQALLNRKILGESIFRQVDSQGNSALHLAAKFGDHR 285 (507)
Q Consensus 230 ~~g~~~iv~~Ll~~~~~~~vv~~Ll~~~~~~~~~in~~D~~GnTpLHlAa~~g~~~ 285 (507)
.+|+.+++++|++++ +.++.+|.+|+||||+|+..|+..
T Consensus 186 ~~~~~~~v~~Ll~~g-----------------ad~~~~d~~g~t~l~~A~~~~~~~ 224 (237)
T 3b7b_A 186 RENRYDCVVLFLSRD-----------------SDVTLKNKEGETPLQCASLNSQVW 224 (237)
T ss_dssp HTTCHHHHHHHHTTT-----------------CCTTCCCTTSCCHHHHSCTTCHHH
T ss_pred HhCCHhHHHHHHHcC-----------------CCCCccCCCCCCHHHHHHHHHHHH
Confidence 999999666666553 457899999999999999998754
No 31
>4g8k_A 2-5A-dependent ribonuclease; ankyrin-repeat domain, single-stranded RNA, hydrolase; 2.40A {Homo sapiens} PDB: 4g8l_A*
Probab=99.86 E-value=8.8e-22 Score=199.01 Aligned_cols=214 Identities=17% Similarity=0.193 Sum_probs=141.3
Q ss_pred cccccC-CCCcHHHHhhcCCCcccCCCCccchhhhhhccccCCCCCCCCCCCCCCchhhHHHHHHHHHHHHHHHhcC---
Q 039657 2 VNSVNE-NGLTPLHILASKPNAFESSSRLGLFDSIIYCCIDLSKKDDGEDQLFPPNYATCVLLFKVMMKAMLIVLGL--- 77 (507)
Q Consensus 2 v~~~D~-~G~TPLh~lA~~p~~f~Sg~~l~~~~~~iy~~~~v~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~--- 77 (507)
||.+|. .|+||||+||+ ..+...++.||-+...+...+.... .|..+......... ...+...+.
T Consensus 51 vn~~~~~~g~TpLh~A~~-------~g~~~iv~~Ll~~ga~~~~~~~~~~--~~~~~~~~~~~~~~--~~~~~~~~~~~~ 119 (337)
T 4g8k_A 51 VNFQEEEGGWTPLHNAVQ-------MSREDIVELLLRHGADPVLRKKNGA--TPFILAAIAGSVKL--LKLFLSKGADVN 119 (337)
T ss_dssp TTCCCTTTCCCHHHHHHH-------TTCHHHHHHHHHTTCCTTCCCTTCC--CHHHHHHHHTCHHH--HHHHHTTTCCTT
T ss_pred CCccCCCCCcCHHHHHHH-------cCCHHHHHHHHHcCCchhhhccCCC--chhHHHHhcccchh--hHHhhhccchhh
Confidence 466665 59999999995 4567788888888776654432211 12111111111110 011111100
Q ss_pred --Cch-hhhHHHHHHHHHhhHHHHHHHHHHhhcccccccCCCCCCCCCCCCcccccccCCCCCCCCCccccccccccccc
Q 039657 78 --GIW-RINHITEKKERHTWAIQVMCELVQHASLYKYEDNGPKRRNSGPKEDEEAFSVSETLPVPDTGEISHQNKSTNHK 154 (507)
Q Consensus 78 --g~~-~i~~i~~~k~~h~~a~~i~~~Ll~~~~~~~~~~~g~~~~~p~~~~d~~~~~~~~~~~~p~~~e~~~~~~~~~~~ 154 (507)
... ...-.++....+ .++++.|+++++........
T Consensus 120 ~~d~~g~t~l~~A~~~~~---~~~~~~ll~~ga~~~~~~~~--------------------------------------- 157 (337)
T 4g8k_A 120 ECDFYGFTAFMEAAVYGK---VKALKFLYKRGANVNLRRKT--------------------------------------- 157 (337)
T ss_dssp CBCTTCCBHHHHHHHTTC---HHHHHHHHHTTCCTTCCCCC---------------------------------------
T ss_pred hhccCCCCHHHHHHHcCc---HHHHHHHHHcCCCcchhhcc---------------------------------------
Confidence 000 112234444444 37788888887655332211
Q ss_pred cccCCCcccCCCCCChHHHHHHHcCCHHHHHHHhhh-CCcccccccCCCCcHHHHHHHcCC------------------c
Q 039657 155 KIENGSAQSGTEKMDNKILLAAKIGVTEMVDRFLKS-YPAVIQELNTSEKNLVLLTFEKKN------------------A 215 (507)
Q Consensus 155 ~~~~~~~~~~d~~g~TpLh~Aa~~G~~~~v~~Ll~~-~~~~~~~~d~~G~tpLh~A~~~~~------------------~ 215 (507)
....+..+..|.||||+||..|+.++|+.||+. ++++ +.+|..|+||+|.++..+. +
T Consensus 158 ---~~~~~~~~~~g~T~L~~A~~~g~~~~v~~LL~~~gad~-n~~d~~g~t~l~~~~~~~~~~~~~~i~~lLl~~gad~n 233 (337)
T 4g8k_A 158 ---KEDQERLRKGGATALMDAAEKGHVEVLKILLDEMGADV-NACDNMGRNALIHALLSSDDSDVEAITHLLLDHGADVN 233 (337)
T ss_dssp ---C-----CTTCSCCHHHHHHHHTCHHHHHHHHHHSCCCT-TCCCTTSCCHHHHHHHHSCTTTHHHHHHHHHHTTCCTT
T ss_pred ---ccccccccCCCCcHHHHHHHCCCHHHHHHHHhccCCCc-CccCCCCCcHHHHHHHHcCcccHHHHHHHHHHCCCCCC
Confidence 011133467899999999999999999999975 6776 8999999999998876543 6
Q ss_pred ccCCCCCCccchhhhcCCHHHHHHHHhhCCchHHHHHHHhcccccccccccccCCCCcHHHHHHhcCCCcccc
Q 039657 216 QQSGRKETPMLIAARMGVTEMVEQILDTFPANQYLQALLNRKILGESIFRQVDSQGNSALHLAAKFGDHRPWL 288 (507)
Q Consensus 216 ~~d~~g~TpLH~Aa~~g~~~iv~~Ll~~~~~~~vv~~Ll~~~~~~~~~in~~D~~GnTpLHlAa~~g~~~~v~ 288 (507)
.+|.+|+||||+|+..|+.++|+.|++... ..+|.+|.+|+||||+|++.|+.++++
T Consensus 234 ~~d~~g~t~L~~a~~~~~~~~v~~Ll~~~~----------------~~vn~~d~~G~TpL~~A~~~g~~~iv~ 290 (337)
T 4g8k_A 234 VRGERGKTPLILAVEKKHLGLVQRLLEQEH----------------IEINDTDSDGKTALLLAVELKLKKIAE 290 (337)
T ss_dssp CCCGGGCCHHHHHHHTTCHHHHHHHHTSTT----------------CCTTCBCTTSCBHHHHHHHTTCHHHHH
T ss_pred CcCCCCCCHHHHHHHhhhhHHHHHHHHhcC----------------CcccCcCCCCCCHHHHHHHcCCHHHHH
Confidence 789999999999999999996666665422 568999999999999999999988764
No 32
>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus}
Probab=99.86 E-value=2.4e-22 Score=199.18 Aligned_cols=174 Identities=12% Similarity=0.018 Sum_probs=134.0
Q ss_pred cccccCCCCcHHHHhhcCCCcccCCCCccchhhhhhccccCCCCCCCCCCCCCCchhhHHHHHHHHHHHHHHHhcCCchh
Q 039657 2 VNSVNENGLTPLHILASKPNAFESSSRLGLFDSIIYCCIDLSKKDDGEDQLFPPNYATCVLLFKVMMKAMLIVLGLGIWR 81 (507)
Q Consensus 2 v~~~D~~G~TPLh~lA~~p~~f~Sg~~l~~~~~~iy~~~~v~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~g~~~ 81 (507)
+|.+|.+|.||||++|+ ..+...++.++-+...++..+ +.+ |.
T Consensus 24 ~~~~d~~g~t~L~~A~~-------~g~~~~v~~Ll~~g~~~~~~~-g~t---~L-------------------------- 66 (285)
T 3kea_A 24 TFKADVHGHSASYYAIA-------DNNVRLVCTLLNAGALKNLLE-NEF---PL-------------------------- 66 (285)
T ss_dssp TTCCCTTSCCHHHHHHH-------TTCHHHHHHHHHTTGGGSCCT-TCC---HH--------------------------
T ss_pred CCccCCCCCCHHHHHHH-------cCCHHHHHHHHhCCCCCCCCC-CCC---HH--------------------------
Confidence 57899999999999995 445667777777766554332 111 11
Q ss_pred hhHHHHHHHHHhhHHHHHHHHHHhhcccccccCCCCCCCCCCCCcccccccCCCCCCCCCccccccccccccccccCCCc
Q 039657 82 INHITEKKERHTWAIQVMCELVQHASLYKYEDNGPKRRNSGPKEDEEAFSVSETLPVPDTGEISHQNKSTNHKKIENGSA 161 (507)
Q Consensus 82 i~~i~~~k~~h~~a~~i~~~Ll~~~~~~~~~~~g~~~~~p~~~~d~~~~~~~~~~~~p~~~e~~~~~~~~~~~~~~~~~~ 161 (507)
.++....| .++++.|++++...
T Consensus 67 ---~~A~~~g~---~~~v~~Ll~~ga~~---------------------------------------------------- 88 (285)
T 3kea_A 67 ---HQAATLED---TKIVKILLFSGLDD---------------------------------------------------- 88 (285)
T ss_dssp ---HHHTTSSS---CHHHHHHHHTTCCT----------------------------------------------------
T ss_pred ---HHHHHcCC---HHHHHHHHHCCCCC----------------------------------------------------
Confidence 11222233 37888999986433
Q ss_pred ccCCCCCChHHHHHHHcCCHHHHHHHhhhCCcccccccCCC-CcHHHHHHHcCC------------cccCC-CCCCccch
Q 039657 162 QSGTEKMDNKILLAAKIGVTEMVDRFLKSYPAVIQELNTSE-KNLVLLTFEKKN------------AQQSG-RKETPMLI 227 (507)
Q Consensus 162 ~~~d~~g~TpLh~Aa~~G~~~~v~~Ll~~~~~~~~~~d~~G-~tpLh~A~~~~~------------~~~d~-~g~TpLH~ 227 (507)
+.+|..|+||||+|+..|+.++++.|++.++++ +.+|..| +||||+|+..++ +..+. .|+||||+
T Consensus 89 ~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~-~~~~~~g~~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~g~t~L~~ 167 (285)
T 3kea_A 89 SQFDDKGNTALYYAVDSGNMQTVKLFVKKNWRL-MFYGKTGWKTSFYHAVMLNDVSIVSYFLSEIPSTFDLAILLSCIHI 167 (285)
T ss_dssp TCCCTTSCCHHHHHHHTTCHHHHHHHHHHCGGG-GGCSSSGGGSHHHHHHHTTCHHHHHHHHTTSCTTCCCSTHHHHHHH
T ss_pred CCcCCCCCcHHHHHHHcCCHHHHHHHHhcCCCC-CccCCCCCCCHHHHHHHcCCHHHHHHHHhCCCccccccCCccHHHH
Confidence 233667999999999999999999999999997 8899999 799999999987 33344 89999999
Q ss_pred hhhcCCHHHHHHHHhhCCchHHHHHHHhcccccccccccccCCCCcH-HHHHHhcCCCcccc
Q 039657 228 AARMGVTEMVEQILDTFPANQYLQALLNRKILGESIFRQVDSQGNSA-LHLAAKFGDHRPWL 288 (507)
Q Consensus 228 Aa~~g~~~iv~~Ll~~~~~~~vv~~Ll~~~~~~~~~in~~D~~GnTp-LHlAa~~g~~~~v~ 288 (507)
|+.+|+.++|++|+++ + +.+|.+|..|+|| ||+|+..|+.++++
T Consensus 168 A~~~g~~~~v~~Ll~~-------------g----ad~n~~~~~g~t~~L~~A~~~~~~~~v~ 212 (285)
T 3kea_A 168 TIKNGHVDMMILLLDY-------------M----TSTNTNNSLLFIPDIKLAIDNKDIEMLQ 212 (285)
T ss_dssp HHHTTCHHHHHHHHHH-------------H----HHTCTTCCCBCCTTHHHHHHHTCHHHHH
T ss_pred HHHcChHHHHHHHHHc-------------C----CCCCcccCCCCChHHHHHHHcCCHHHHH
Confidence 9999999966665554 4 5689999999998 99999999987764
No 33
>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major}
Probab=99.86 E-value=6.1e-22 Score=202.31 Aligned_cols=109 Identities=9% Similarity=0.057 Sum_probs=97.1
Q ss_pred ccCCCCCChHHHHHHHcC--CHHHHHHHhhhCCcccccccCCCCcHHHHHHHcCC-------------------cccCCC
Q 039657 162 QSGTEKMDNKILLAAKIG--VTEMVDRFLKSYPAVIQELNTSEKNLVLLTFEKKN-------------------AQQSGR 220 (507)
Q Consensus 162 ~~~d~~g~TpLh~Aa~~G--~~~~v~~Ll~~~~~~~~~~d~~G~tpLh~A~~~~~-------------------~~~d~~ 220 (507)
+..|..|.||||+||..| +.++|+.|++.++++ +.+|.+|+||||+|+..|+ +.+|.+
T Consensus 132 ~~~~~~g~t~L~~A~~~g~~~~~~v~~Ll~~ga~~-~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~ 210 (364)
T 3ljn_A 132 HVKHCKGQTALHWCVGLGPEYLEMIKILVQLGASP-TAKDKADETPLMRAMEFRNREALDLMMDTVPSKSSLRLDYANKQ 210 (364)
T ss_dssp EEEEESCCCHHHHHHHSCGGGHHHHHHHHHHTCCT-TCCCTTSCCHHHHHHHTTCHHHHHHHHHHCSCSSSCCTTCCCTT
T ss_pred ccCCCCCCCHHHHHHHcCCchHHHHHHHHHcCCCC-cccCCCCCCHHHHHHHcCCHHHHHHHHhcccccccccccccCCC
Confidence 345778999999999999 999999999999997 8999999999999999987 357889
Q ss_pred CCCccchhhhcCCHHHHHHHHhhCCchHHHHHHHhcccccccccccccCCCCcHHHHHHhcCCCcccc
Q 039657 221 KETPMLIAARMGVTEMVEQILDTFPANQYLQALLNRKILGESIFRQVDSQGNSALHLAAKFGDHRPWL 288 (507)
Q Consensus 221 g~TpLH~Aa~~g~~~iv~~Ll~~~~~~~vv~~Ll~~~~~~~~~in~~D~~GnTpLHlAa~~g~~~~v~ 288 (507)
|+||||+|+.+|+.++|++|++++ +.+|.+|.+|+||||+|+..|+.++++
T Consensus 211 g~t~L~~A~~~g~~~~v~~Ll~~g-----------------ad~~~~d~~g~tpL~~A~~~g~~~~v~ 261 (364)
T 3ljn_A 211 GNSHLHWAILINWEDVAMRFVEMG-----------------IDVNMEDNEHTVPLYLSVRAAMVLLTK 261 (364)
T ss_dssp CCCTTHHHHTTTCHHHHHHHHTTT-----------------CCTTCCCTTSCCHHHHHHHTCCHHHHH
T ss_pred CCcHHHHHHHcCCHHHHHHHHHcC-----------------CCCCCCCCCCCCHHHHHHHhChHHHHH
Confidence 999999999999999666666553 457999999999999999999988874
No 34
>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1
Probab=99.86 E-value=5.9e-21 Score=186.37 Aligned_cols=107 Identities=19% Similarity=0.263 Sum_probs=85.3
Q ss_pred CCCCChHHHHHHHcCCHHHHHHHhhh-CCcccccccCCCCcHHHHHHHcCC------------------cccCCCCCCcc
Q 039657 165 TEKMDNKILLAAKIGVTEMVDRFLKS-YPAVIQELNTSEKNLVLLTFEKKN------------------AQQSGRKETPM 225 (507)
Q Consensus 165 d~~g~TpLh~Aa~~G~~~~v~~Ll~~-~~~~~~~~d~~G~tpLh~A~~~~~------------------~~~d~~g~TpL 225 (507)
+..|.||||+|+..|+.++++.|++. +.++ +.+|..|+||||+|+..++ +.+|.+|+|||
T Consensus 145 ~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~-~~~~~~g~t~l~~a~~~~~~~~~~~i~~~Ll~~g~~~~~~~~~g~t~L 223 (285)
T 1wdy_A 145 RKGGATALMDAAEKGHVEVLKILLDEMGADV-NACDNMGRNALIHALLSSDDSDVEAITHLLLDHGADVNVRGERGKTPL 223 (285)
T ss_dssp TCCCCCHHHHHHHHTCHHHHHHHHHTSCCCT-TCCCTTSCCHHHHHHHCSCTTTHHHHHHHHHHTTCCSSCCCTTSCCHH
T ss_pred ccCCCcHHHHHHHcCCHHHHHHHHHhcCCCC-CccCCCCCCHHHHHHHccccchHHHHHHHHHHcCCCCCCcCCCCCcHH
Confidence 67788888888888888888888877 6665 7788888888888887665 46778888888
Q ss_pred chhhhcCCHHHHHHHHhhCCchHHHHHHHhcccccccccccccCCCCcHHHHHHhcCCCcccc
Q 039657 226 LIAARMGVTEMVEQILDTFPANQYLQALLNRKILGESIFRQVDSQGNSALHLAAKFGDHRPWL 288 (507)
Q Consensus 226 H~Aa~~g~~~iv~~Ll~~~~~~~vv~~Ll~~~~~~~~~in~~D~~GnTpLHlAa~~g~~~~v~ 288 (507)
|+|+.+|+.++|++|++. .+ ..++.+|.+|+||||+|+..|+.++++
T Consensus 224 ~~A~~~~~~~~v~~Ll~~------------~g----~~~~~~~~~g~t~l~~A~~~~~~~i~~ 270 (285)
T 1wdy_A 224 ILAVEKKHLGLVQRLLEQ------------EH----IEINDTDSDGKTALLLAVELKLKKIAE 270 (285)
T ss_dssp HHHHHTTCHHHHHHHHHS------------SS----CCTTCCCTTSCCHHHHHHHTTCHHHHH
T ss_pred HHHHHcCCHHHHHHHHhc------------cC----CCccccCCCCCcHHHHHHHcCcHHHHH
Confidence 888888888855555552 22 568999999999999999999988764
No 35
>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A
Probab=99.85 E-value=9e-22 Score=186.81 Aligned_cols=102 Identities=15% Similarity=0.053 Sum_probs=90.2
Q ss_pred cCCCCCChHHHHHHHcCCHHHHHHHhhhCCcccccccCCCCcHHHHHHHcCC---------------cccCCCCCCccch
Q 039657 163 SGTEKMDNKILLAAKIGVTEMVDRFLKSYPAVIQELNTSEKNLVLLTFEKKN---------------AQQSGRKETPMLI 227 (507)
Q Consensus 163 ~~d~~g~TpLh~Aa~~G~~~~v~~Ll~~~~~~~~~~d~~G~tpLh~A~~~~~---------------~~~d~~g~TpLH~ 227 (507)
.+|..|.||||+|+..|+.++++.|++.++++ +.+|..|+||||+|+..++ +.+|.+|+||||+
T Consensus 102 ~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~d~~g~t~L~~ 180 (228)
T 2dzn_A 102 KITNQGVTCLHLAVGKKWFEVSQFLIENGASV-RIKDKFNQIPLHRAASVGSLKLIELLCGLGKSAVNWQDKQGWTPLFH 180 (228)
T ss_dssp CCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCS-CCCCTTSCCHHHHHHHTTCHHHHHHHHTTTCCCSCCCCTTSCCHHHH
T ss_pred cCCcCCCCHHHHHHHcCCHhHHHHHHHcCCCc-cccCCCCCCHHHHHHHcCCHHHHHHHHhcCcccccCcCCCCCCHHHH
Confidence 34667999999999999999999999999997 8999999999999999887 5689999999999
Q ss_pred hhhcCCHHHHHHHH-hhCCchHHHHHHHhcccccccccccccCCCCcHHHHHHhcC
Q 039657 228 AARMGVTEMVEQIL-DTFPANQYLQALLNRKILGESIFRQVDSQGNSALHLAAKFG 282 (507)
Q Consensus 228 Aa~~g~~~iv~~Ll-~~~~~~~vv~~Ll~~~~~~~~~in~~D~~GnTpLHlAa~~g 282 (507)
|+..|+.++|++|+ +. | +.++.+|.+|+||||+|+..+
T Consensus 181 A~~~~~~~~v~~Ll~~~-------------g----a~~~~~~~~g~t~l~~A~~~~ 219 (228)
T 2dzn_A 181 ALAEGHGDAAVLLVEKY-------------G----AEYDLVDNKGAKAEDVALNEQ 219 (228)
T ss_dssp HHHTTCHHHHHHHHHHH-------------C----CCSCCBCTTSCBGGGGCSSTT
T ss_pred HHHcCCHHHHHHHHHhc-------------C----CCCCccCCCCCcHHHHHHHHH
Confidence 99999999666666 44 3 467999999999999997654
No 36
>2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A
Probab=99.85 E-value=3.6e-21 Score=186.72 Aligned_cols=114 Identities=15% Similarity=0.047 Sum_probs=93.0
Q ss_pred CCCCCChHHHHHHHcCCHHHHHHHhhhCCcccccccCC-------------CCcHHHHHHHcCC----------------
Q 039657 164 GTEKMDNKILLAAKIGVTEMVDRFLKSYPAVIQELNTS-------------EKNLVLLTFEKKN---------------- 214 (507)
Q Consensus 164 ~d~~g~TpLh~Aa~~G~~~~v~~Ll~~~~~~~~~~d~~-------------G~tpLh~A~~~~~---------------- 214 (507)
.|..|.||||+||..|+.++|+.|++.++++ +.+|.. |+||||+|+..++
T Consensus 86 ~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~-~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~~~~ga~ 164 (256)
T 2etb_A 86 EFYQGHSALHIAIEKRSLQCVKLLVENGADV-HLRACGRFFQKHQGTCFYFGELPLSLAACTKQWDVVTYLLENPHQPAS 164 (256)
T ss_dssp TTTTTCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCCSGGGSCCSSSCCCSCSSHHHHHHHTTCHHHHHHHHHCSSCCCC
T ss_pred ccccCCCHHHHHHHcCCHHHHHHHHHcCCCC-CcccccccccccccccccCCCCHHHHHHHcCCHHHHHHHHhccccCCC
Confidence 3567999999999999999999999999997 777776 9999999998875
Q ss_pred -cccCCCCCCccchhhh--cCCHH-------HHHHHHhhCCchHHHHHHHhcccccccccccccCCCCcHHHHHHhcCCC
Q 039657 215 -AQQSGRKETPMLIAAR--MGVTE-------MVEQILDTFPANQYLQALLNRKILGESIFRQVDSQGNSALHLAAKFGDH 284 (507)
Q Consensus 215 -~~~d~~g~TpLH~Aa~--~g~~~-------iv~~Ll~~~~~~~vv~~Ll~~~~~~~~~in~~D~~GnTpLHlAa~~g~~ 284 (507)
+.+|.+|+||||+|+. +|+.+ +|++|++++++ + . ......+.+|..|+||||+|+..|+.
T Consensus 165 ~n~~d~~g~TpLh~A~~~~~~~~~~~~~~~~iv~~Ll~~ga~--~-----~---~~~~~~~~~d~~g~tpL~~A~~~g~~ 234 (256)
T 2etb_A 165 LEATDSLGNTVLHALVMIADNSPENSALVIHMYDGLLQMGAR--L-----C---PTVQLEEISNHQGLTPLKLAAKEGKI 234 (256)
T ss_dssp TTCCCTTSCCHHHHHHHHCCSCHHHHHHHHHHHHHHHHHHHH--H-----S---TTCCGGGCCCTTSCCHHHHHHHTTCH
T ss_pred cCccCCCCCCHHHHHHHcccCCchhhHHHHHHHHHHHHcCCC--c-----c---cccccccccCCCCCCHHHHHHHhCCH
Confidence 5689999999999999 88888 66666655333 0 0 00011289999999999999999998
Q ss_pred cccc
Q 039657 285 RPWL 288 (507)
Q Consensus 285 ~~v~ 288 (507)
++++
T Consensus 235 ~~v~ 238 (256)
T 2etb_A 235 EIFR 238 (256)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 8764
No 37
>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A
Probab=99.85 E-value=3.5e-21 Score=174.41 Aligned_cols=108 Identities=19% Similarity=0.156 Sum_probs=95.1
Q ss_pred cCCCCCChHHHHHHHcCCHHHHHHHhhhCCcccccccCCCCcHHHHHHHcCC--------------cccCCCCCCccchh
Q 039657 163 SGTEKMDNKILLAAKIGVTEMVDRFLKSYPAVIQELNTSEKNLVLLTFEKKN--------------AQQSGRKETPMLIA 228 (507)
Q Consensus 163 ~~d~~g~TpLh~Aa~~G~~~~v~~Ll~~~~~~~~~~d~~G~tpLh~A~~~~~--------------~~~d~~g~TpLH~A 228 (507)
..|..|.||||+|+..|+.++++.|++.++++ +..|..|+||||+|+..++ +.+|.+|+||||+|
T Consensus 31 ~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A 109 (167)
T 3v31_A 31 HTDEEGFTPLMWAAAHGQIAVVEFLLQNGADP-QLLGKGRESALSLACSKGYTDIVKMLLDCGVDVNEYDWNGGTPLLYA 109 (167)
T ss_dssp CCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTCCCHHHHHHHHTCHHHHHHHHHHTCCTTCCCTTSCCHHHHH
T ss_pred CCCCCCCCHHHHHHHCCCHHHHHHHHHcCCCC-CCcCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCcCCCCCCCHHHHH
Confidence 34667999999999999999999999999887 8889999999999999887 67899999999999
Q ss_pred hhcCCHHHHHHHHhhCCchHHHHHHHhcccccccccccccCCCCcHHHHHHhcCCCcccc
Q 039657 229 ARMGVTEMVEQILDTFPANQYLQALLNRKILGESIFRQVDSQGNSALHLAAKFGDHRPWL 288 (507)
Q Consensus 229 a~~g~~~iv~~Ll~~~~~~~vv~~Ll~~~~~~~~~in~~D~~GnTpLHlAa~~g~~~~v~ 288 (507)
+..|+.+++++|++++ +.++.+|.+|+||||+|+..|+.++++
T Consensus 110 ~~~~~~~~v~~Ll~~g-----------------~~~~~~~~~g~t~l~~A~~~~~~~~~~ 152 (167)
T 3v31_A 110 VHGNHVKCVKMLLESG-----------------ADPTIETDSGYNSMDLAVALGYRSVQQ 152 (167)
T ss_dssp HHTTCHHHHHHHHHTT-----------------CCTTCCCTTSCCHHHHHHHHTCHHHHH
T ss_pred HHcCCHHHHHHHHHcC-----------------CCCCCcCCCCCCHHHHHHHcCcHHHHH
Confidence 9999999666666553 457889999999999999999988753
No 38
>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis}
Probab=99.85 E-value=6.4e-21 Score=177.53 Aligned_cols=108 Identities=19% Similarity=0.182 Sum_probs=90.3
Q ss_pred CCCCCChHHHHHHHcCCHHHHHHHhhhCCcccccccCCCCcHHHHHHHcCC---------------cccCCCCCCccchh
Q 039657 164 GTEKMDNKILLAAKIGVTEMVDRFLKSYPAVIQELNTSEKNLVLLTFEKKN---------------AQQSGRKETPMLIA 228 (507)
Q Consensus 164 ~d~~g~TpLh~Aa~~G~~~~v~~Ll~~~~~~~~~~d~~G~tpLh~A~~~~~---------------~~~d~~g~TpLH~A 228 (507)
+|..|.||||+|+..|+.++++.|++.+...++..|..|+||||+|+..++ +.+|.+|+||||+|
T Consensus 68 ~~~~g~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~g~t~L~~A 147 (201)
T 3hra_A 68 QNSISDSPYLYAGAQGRTEILAYMLKHATPDLNKHNRYGGNALIPAAEKGHIDNVKLLLEDGREDIDFQNDFGYTALIEA 147 (201)
T ss_dssp CCTTSCCHHHHHHHTTCHHHHHHHHHHSCCCTTCCCTTSCCSHHHHHHTTCHHHHHHHHHHCCCCTTCCCTTSCCHHHHH
T ss_pred CCCCCCCHHHHHHHcCCHHHHHHHHhccCcccccccCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcCCCCCCCCCHHHHH
Confidence 356789999999999999999999966554458889999999999998887 56888999999999
Q ss_pred hhcCC-----HHHHHHHHhhCCchHHHHHHHhcccccccccccccCCCCcHHHHHHhcCCCcccc
Q 039657 229 ARMGV-----TEMVEQILDTFPANQYLQALLNRKILGESIFRQVDSQGNSALHLAAKFGDHRPWL 288 (507)
Q Consensus 229 a~~g~-----~~iv~~Ll~~~~~~~vv~~Ll~~~~~~~~~in~~D~~GnTpLHlAa~~g~~~~v~ 288 (507)
+..|+ .+++++|+++ + +.++.+|..|+||||+|+..|+.++++
T Consensus 148 ~~~~~~~~~~~~~v~~Ll~~-------------g----a~~~~~~~~g~t~l~~A~~~~~~~~~~ 195 (201)
T 3hra_A 148 VGLREGNQLYQDIVKLLMEN-------------G----ADQSIKDNSGRTAMDYANQKGYTEISK 195 (201)
T ss_dssp HHSSCCSHHHHHHHHHHHHT-------------T----CCTTCCCTTSCCHHHHHHHHTCHHHHH
T ss_pred HHhccchhhHHHHHHHHHHC-------------C----CCCCccCCCCCCHHHHHHHcCCHhHHH
Confidence 99988 8855555554 4 457899999999999999999988753
No 39
>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1
Probab=99.85 E-value=2.2e-21 Score=199.66 Aligned_cols=180 Identities=16% Similarity=0.174 Sum_probs=135.9
Q ss_pred cccccCCCCcHHHHhhcCCCcccCCCCccchhhhhhccccCCCCCCCCCCCCCCchhhHHHHHHHHHHHHHHHhcCCchh
Q 039657 2 VNSVNENGLTPLHILASKPNAFESSSRLGLFDSIIYCCIDLSKKDDGEDQLFPPNYATCVLLFKVMMKAMLIVLGLGIWR 81 (507)
Q Consensus 2 v~~~D~~G~TPLh~lA~~p~~f~Sg~~l~~~~~~iy~~~~v~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~g~~~ 81 (507)
+|.+|.+|.||||+++. ..+...++.|+-+...+...+.... +.+
T Consensus 159 vn~~d~~g~TpL~~A~~-------~g~~~iv~~Ll~~ga~~~~~~~~g~--------t~L-------------------- 203 (373)
T 2fo1_E 159 VNAMDCDENTPLMLAVL-------ARRRRLVAYLMKAGADPTIYNKSER--------SAL-------------------- 203 (373)
T ss_dssp TTCCCTTSCCHHHHHHH-------HTCHHHHHHHHHTTCCSCCCCTTCC--------CHH--------------------
T ss_pred CcCCCCCCCCHHHHHHH-------cChHHHHHHHHHCCCCCcccCCCCC--------CHH--------------------
Confidence 57899999999999994 4566778888877766543331111 111
Q ss_pred hhHHHHHHHHHhhHHHHHHHHHHhhcccccccCCCCCCCCCCCCcccccccCCCCCCCCCccccccccccccccccCCCc
Q 039657 82 INHITEKKERHTWAIQVMCELVQHASLYKYEDNGPKRRNSGPKEDEEAFSVSETLPVPDTGEISHQNKSTNHKKIENGSA 161 (507)
Q Consensus 82 i~~i~~~k~~h~~a~~i~~~Ll~~~~~~~~~~~g~~~~~p~~~~d~~~~~~~~~~~~p~~~e~~~~~~~~~~~~~~~~~~ 161 (507)
.++....| .++++.|++++... . +.
T Consensus 204 ---~~A~~~g~---~~~v~~Ll~~~~~~-~------------------------------------------------~~ 228 (373)
T 2fo1_E 204 ---HQAAANRD---FGMMVYMLNSTKLK-G------------------------------------------------DI 228 (373)
T ss_dssp ---HHHHHTTC---HHHHHHHTTSHHHH-H------------------------------------------------TT
T ss_pred ---HHHHHCCC---HHHHHHHHhcCccc-c------------------------------------------------Ch
Confidence 11222233 37888888875210 0 11
Q ss_pred ccCCCCCChHHHHHHHcC---CHHHHHHHhhhCCcccc-------cccCCCCcHHHHHHHcCC---------------cc
Q 039657 162 QSGTEKMDNKILLAAKIG---VTEMVDRFLKSYPAVIQ-------ELNTSEKNLVLLTFEKKN---------------AQ 216 (507)
Q Consensus 162 ~~~d~~g~TpLh~Aa~~G---~~~~v~~Ll~~~~~~~~-------~~d~~G~tpLh~A~~~~~---------------~~ 216 (507)
+..|..|.||||+||..| +.++++.|++.++++.. ..|..|+||||+|+..|+ +.
T Consensus 229 ~~~d~~g~t~L~~A~~~~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~n~ 308 (373)
T 2fo1_E 229 EELDRNGMTALMIVAHNEGRDQVASAKLLVEKGAKVDYDGAARKDSEKYKGRTALHYAAQVSNMPIVKYLVGEKGSNKDK 308 (373)
T ss_dssp SCCCTTSCCHHHHHHHSCSTTHHHHHHHHHHHTCCSSCCSGGGTSSSSCCCCCTHHHHHSSCCHHHHHHHHHHSCCCTTC
T ss_pred hhcCCCCCCHHHHHHHhCCcchHHHHHHHHHCCCCcccccccccCcccccCCCHHHHHHHhCCHHHHHHHHHhcCCCccC
Confidence 344678999999999998 89999999999988722 367899999999999887 67
Q ss_pred cCCCCCCccchhhhcCCHHHHHHHHhhCCchHHHHHHHhcccccccccccccCCCCcHHHHHHhcCCCcccc
Q 039657 217 QSGRKETPMLIAARMGVTEMVEQILDTFPANQYLQALLNRKILGESIFRQVDSQGNSALHLAAKFGDHRPWL 288 (507)
Q Consensus 217 ~d~~g~TpLH~Aa~~g~~~iv~~Ll~~~~~~~vv~~Ll~~~~~~~~~in~~D~~GnTpLHlAa~~g~~~~v~ 288 (507)
+|.+|+||||+|+.+|+.++|++|+++ + +.++.+|..|+||||+|+..|+.++++
T Consensus 309 ~d~~g~TpL~~A~~~g~~~iv~~Ll~~-------------g----ad~~~~d~~g~t~l~~A~~~g~~~iv~ 363 (373)
T 2fo1_E 309 QDEDGKTPIMLAAQEGRIEVVMYLIQQ-------------G----ASVEAVDATDHTARQLAQANNHHNIVD 363 (373)
T ss_dssp CCTTCCCHHHHHHHHTCHHHHHHHHHT-------------T----CCSSCCCSSSCCHHHHHHHTTCHHHHH
T ss_pred cCCCCCCHHHHHHHcCCHHHHHHHHHc-------------C----CCccCCCCCCCCHHHHHHHcCCHHHHH
Confidence 899999999999999999966666655 3 457999999999999999999988763
No 40
>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens}
Probab=99.85 E-value=7.7e-21 Score=180.96 Aligned_cols=109 Identities=18% Similarity=0.139 Sum_probs=94.7
Q ss_pred ccCCCCCChHHHHHHHcCCHHHHHHHhhhCCcccccccCCCCcHHHHHHHcCC---------------cccCC-CCCCcc
Q 039657 162 QSGTEKMDNKILLAAKIGVTEMVDRFLKSYPAVIQELNTSEKNLVLLTFEKKN---------------AQQSG-RKETPM 225 (507)
Q Consensus 162 ~~~d~~g~TpLh~Aa~~G~~~~v~~Ll~~~~~~~~~~d~~G~tpLh~A~~~~~---------------~~~d~-~g~TpL 225 (507)
+..+..|.||||+|+..|+.++++.|++.++++ +.+|.+|+||||+|+..++ +.++. .|.|||
T Consensus 103 ~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~~~~~-~~~~~~g~t~l~~a~~~~~~~~~~~~L~~~~~~~~~~~~~~g~t~L 181 (240)
T 3eu9_A 103 SLIDGEGCSCIHLAAQFGHTSIVAYLIAKGQDV-DMMDQNGMTPLMWAAYRTHSVDPTRLLLTFNVSVNLGDKYHKNTAL 181 (240)
T ss_dssp TCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHHCCSSTTHHHHHHTTCCTTCCCTTTCCCHH
T ss_pred cccCCCCCCHHHHHHHcCHHHHHHHHHhcCCCc-cccCCCCCcHHHHHHHhCChHHHHHHHHhcCCCcchhhccCCCcHH
Confidence 344678999999999999999999999999987 8899999999999997665 45565 899999
Q ss_pred chhhhcCCHHHHHHHHhhCCchHHHHHHHhcccccccccccccCCCCcHHHHHHhcCCCcccc
Q 039657 226 LIAARMGVTEMVEQILDTFPANQYLQALLNRKILGESIFRQVDSQGNSALHLAAKFGDHRPWL 288 (507)
Q Consensus 226 H~Aa~~g~~~iv~~Ll~~~~~~~vv~~Ll~~~~~~~~~in~~D~~GnTpLHlAa~~g~~~~v~ 288 (507)
|+|+.+|+.++|++|++++ ..++.+|..|+||||+|++.|+.++++
T Consensus 182 ~~A~~~~~~~~v~~Ll~~g-----------------~~~~~~~~~g~t~l~~A~~~~~~~~v~ 227 (240)
T 3eu9_A 182 HWAVLAGNTTVISLLLEAG-----------------ANVDAQNIKGESALDLAKQRKNVWMIN 227 (240)
T ss_dssp HHHHHHTCHHHHHHHHHHT-----------------CCTTCBCTTSCBHHHHHHHTTCHHHHH
T ss_pred HHHHHcCCHHHHHHHHHcC-----------------CCCCCcCCCCCCHHHHHHHcCcHHHHH
Confidence 9999999999776666654 457899999999999999999988763
No 41
>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D
Probab=99.85 E-value=3e-21 Score=188.79 Aligned_cols=107 Identities=11% Similarity=-0.006 Sum_probs=79.6
Q ss_pred CcccCCCCCChHHHHHHHcCCHHHHHHHhhhCCccccccc-CCCCcHHHHHHHcCC--------------cccCCCCCCc
Q 039657 160 SAQSGTEKMDNKILLAAKIGVTEMVDRFLKSYPAVIQELN-TSEKNLVLLTFEKKN--------------AQQSGRKETP 224 (507)
Q Consensus 160 ~~~~~d~~g~TpLh~Aa~~G~~~~v~~Ll~~~~~~~~~~d-~~G~tpLh~A~~~~~--------------~~~d~~g~Tp 224 (507)
..+.+|..|.||||+|+..|+.++|+.|++.++++ +.+| ..|+||||+|+..++ +.+|..|+||
T Consensus 150 ~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~-~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~gad~~~~d~~g~tp 228 (282)
T 1oy3_D 150 QLEAENYDGHTPLHVAVIHKDAEMVRLLRDAGADL-NKPEPTCGRTPLHLAVEAQAASVLELLLKAGADPTARMYGGRTP 228 (282)
T ss_dssp GTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCCT-TCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCH
T ss_pred cCCCcCCCCcCHHHHHHHcCCHHHHHHHHHcCCCC-CCCCCCCCcCHHHHHHHcCCHHHHHHHHHcCCCCcccccCCCCH
Confidence 45677889999999999999999999999999998 6666 459999999999987 7899999999
Q ss_pred cchhhhcCCHHHHHHHHhhCCchHHHHHHHhcccccccccccccCCCCcHHHHHHhcCCC
Q 039657 225 MLIAARMGVTEMVEQILDTFPANQYLQALLNRKILGESIFRQVDSQGNSALHLAAKFGDH 284 (507)
Q Consensus 225 LH~Aa~~g~~~iv~~Ll~~~~~~~vv~~Ll~~~~~~~~~in~~D~~GnTpLHlAa~~g~~ 284 (507)
||+|+.+|+.++|++|+++ | +.++.+|.+|.|||++|....+.
T Consensus 229 L~~A~~~~~~~~v~~Ll~~-------------g----a~~~~~~~~g~tpl~~a~~~~~~ 271 (282)
T 1oy3_D 229 LGSALLRPNPILARLLRAH-------------G----APEPEDGGDKLSPCSSSGSDSDS 271 (282)
T ss_dssp HHHHHTSSCHHHHHHHHHT-------------T----CCCCCCC----------------
T ss_pred HHHHHHcCCcHHHHHHHHc-------------C----CCcCcCCCcccccccccCCcccc
Confidence 9999999999966666655 4 45799999999999999987653
No 42
>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis}
Probab=99.85 E-value=3.9e-21 Score=178.99 Aligned_cols=137 Identities=11% Similarity=0.068 Sum_probs=114.3
Q ss_pred ccCCCCCChHHHHHHHcCCHHHHHHHhhhCCcccccccCCCCcHHHHHHHcCC---------------cccCCCCCCccc
Q 039657 162 QSGTEKMDNKILLAAKIGVTEMVDRFLKSYPAVIQELNTSEKNLVLLTFEKKN---------------AQQSGRKETPML 226 (507)
Q Consensus 162 ~~~d~~g~TpLh~Aa~~G~~~~v~~Ll~~~~~~~~~~d~~G~tpLh~A~~~~~---------------~~~d~~g~TpLH 226 (507)
+..|..|.||||+||..|+.++++.|++.++++ +.+|..|+||||+|+..++ +.+|..|.||||
T Consensus 33 ~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~L~ 111 (201)
T 3hra_A 33 DEVDTEGNTPLNIAVHNNDIEIAKALIDRGADI-NLQNSISDSPYLYAGAQGRTEILAYMLKHATPDLNKHNRYGGNALI 111 (201)
T ss_dssp TCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHTTCHHHHHHHHHHSCCCTTCCCTTSCCSHH
T ss_pred CCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC-CCCCCCCCCHHHHHHHcCCHHHHHHHHhccCcccccccCCCCcHHH
Confidence 344678999999999999999999999999997 8899999999999999887 678899999999
Q ss_pred hhhhcCCHHHHHHHHhhCCchHHHHHHHhcccccccccccccCCCCcHHHHHHhcCC-----CcccccCchhhhhHHHHH
Q 039657 227 IAARMGVTEMVEQILDTFPANQYLQALLNRKILGESIFRQVDSQGNSALHLAAKFGD-----HRPWLLPGAALQMQWEIK 301 (507)
Q Consensus 227 ~Aa~~g~~~iv~~Ll~~~~~~~vv~~Ll~~~~~~~~~in~~D~~GnTpLHlAa~~g~-----~~~v~~~gaal~~~~el~ 301 (507)
+|+.+|+.+++++|++.++ ..++.+|..|+||||+|+..++ .++++
T Consensus 112 ~A~~~~~~~~v~~Ll~~g~----------------~~~~~~~~~g~t~L~~A~~~~~~~~~~~~~v~------------- 162 (201)
T 3hra_A 112 PAAEKGHIDNVKLLLEDGR----------------EDIDFQNDFGYTALIEAVGLREGNQLYQDIVK------------- 162 (201)
T ss_dssp HHHHTTCHHHHHHHHHHCC----------------CCTTCCCTTSCCHHHHHHHSSCCSHHHHHHHH-------------
T ss_pred HHHHcCCHHHHHHHHHcCC----------------CCcCCCCCCCCCHHHHHHHhccchhhHHHHHH-------------
Confidence 9999999998777777653 3578999999999999999887 23321
Q ss_pred HhhhhhccCCccccccccCCCCCccccccccc
Q 039657 302 WYQFVKKSMPRHFFTRFNDNGKTPKEVFTETH 333 (507)
Q Consensus 302 w~~~v~~~~~~~~~~~~N~~G~Tpldl~~~~~ 333 (507)
++ ++ .+.+.+.+|.+|+||++++....
T Consensus 163 ~L--l~---~ga~~~~~~~~g~t~l~~A~~~~ 189 (201)
T 3hra_A 163 LL--ME---NGADQSIKDNSGRTAMDYANQKG 189 (201)
T ss_dssp HH--HH---TTCCTTCCCTTSCCHHHHHHHHT
T ss_pred HH--HH---CCCCCCccCCCCCCHHHHHHHcC
Confidence 11 11 23456789999999999987653
No 43
>4hbd_A KN motif and ankyrin repeat domain-containing Pro; structural genomics consortium, SGC, protein binding; 1.72A {Homo sapiens}
Probab=99.84 E-value=2.3e-21 Score=191.30 Aligned_cols=105 Identities=17% Similarity=0.171 Sum_probs=66.9
Q ss_pred CCChHHHHHH-----HcCCHHHHHHHhhhCCcccccccCCCCcHHHHHHHcCC--------------cccCCCCCCccch
Q 039657 167 KMDNKILLAA-----KIGVTEMVDRFLKSYPAVIQELNTSEKNLVLLTFEKKN--------------AQQSGRKETPMLI 227 (507)
Q Consensus 167 ~g~TpLh~Aa-----~~G~~~~v~~Ll~~~~~~~~~~d~~G~tpLh~A~~~~~--------------~~~d~~g~TpLH~ 227 (507)
.|.||||+|+ ..|+.++++.|++.+.+. ...|..|+||||+|+..|+ +.+|.+|+||||+
T Consensus 144 ~g~tpL~~a~~~~~~~~~~~~~v~~Ll~~g~~~-~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~gad~n~~d~~G~TpLh~ 222 (276)
T 4hbd_A 144 AGYSPIMLTALATLKTQDDIETVLQLFRLGNIN-AKASQAGQTALMLAVSHGRVDVVKALLACEADVNVQDDDGSTALMC 222 (276)
T ss_dssp TSCCHHHHGGGCCCCSHHHHHHHHHHHHHSCTT-CCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHH
T ss_pred CCCCHHHHHHHHHhhhhhhHHHHHHHHHcCCCc-cccCCCCCCHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCCHHHH
Confidence 3444444444 334444444444444332 3344444444444444443 5566677777777
Q ss_pred hhhcCCHHHHHHHHhhCCchHHHHHHHhcccccccccccccCCCCcHHHHHHhcCCCcccc
Q 039657 228 AARMGVTEMVEQILDTFPANQYLQALLNRKILGESIFRQVDSQGNSALHLAAKFGDHRPWL 288 (507)
Q Consensus 228 Aa~~g~~~iv~~Ll~~~~~~~vv~~Ll~~~~~~~~~in~~D~~GnTpLHlAa~~g~~~~v~ 288 (507)
|+.+|+.++|++|++. .+ +++|.+|.+|+||||+|+..|+.++++
T Consensus 223 A~~~g~~~iv~~Ll~~------------~g----ad~~~~d~~g~TpL~~A~~~g~~~iv~ 267 (276)
T 4hbd_A 223 ACEHGHKEIAGLLLAV------------PS----CDISLTDRDGSTALMVALDAGQSEIAS 267 (276)
T ss_dssp HHHHTCHHHHHHHHTS------------TT----CCTTCCCTTSCCHHHHHHHHTCHHHHH
T ss_pred HHHCCCHHHHHHHHhc------------CC----CCCcCcCCCCCCHHHHHHHcCCHHHHH
Confidence 9999999966666651 22 567999999999999999999988764
No 44
>2rfa_A Transient receptor potential cation channel subfa member 6; TRPV6, ankyrin reapeat, ANK RE calcium channel, calcium transport, calmodulin-binding; 1.70A {Mus musculus}
Probab=99.84 E-value=3.7e-21 Score=183.47 Aligned_cols=144 Identities=16% Similarity=0.131 Sum_probs=109.3
Q ss_pred ccCCCCCChHHHHHHHcCCHHHHHHHhhhCCccc----ccccCCCCcHHHHHHHcCC--------------ccc------
Q 039657 162 QSGTEKMDNKILLAAKIGVTEMVDRFLKSYPAVI----QELNTSEKNLVLLTFEKKN--------------AQQ------ 217 (507)
Q Consensus 162 ~~~d~~g~TpLh~Aa~~G~~~~v~~Ll~~~~~~~----~~~d~~G~tpLh~A~~~~~--------------~~~------ 217 (507)
+.+|..|+||||+||..|+.++++.|++.++++. +.+|.+|+||||+|+..++ +.+
T Consensus 31 ~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~~ 110 (232)
T 2rfa_A 31 HQRGAMGETALHIAALYDNLEAAMVLMEAAPELVFEPMTSELYEGQTALHIAVINQNVNLVRALLARGASVSARATGSVF 110 (232)
T ss_dssp TCCCTTSCCHHHHHHHTTCHHHHHHHHHHCGGGGGCCCCSTTTTTCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCCSGGG
T ss_pred ccCCCCCCCHHHHHHHcCCHHHHHHHHHcCchhccccccccCCCCcCHHHHHHHcCCHHHHHHHHhCCCCCCcccCCcce
Confidence 3446789999999999999999999999998863 4567899999999999987 333
Q ss_pred -------CCCCCCccchhhhcCCHHHHHHHHhhCCchHHHHHHHhcccccccccccccCCCCcHHHHHHhcCCCcccccC
Q 039657 218 -------SGRKETPMLIAARMGVTEMVEQILDTFPANQYLQALLNRKILGESIFRQVDSQGNSALHLAAKFGDHRPWLLP 290 (507)
Q Consensus 218 -------d~~g~TpLH~Aa~~g~~~iv~~Ll~~~~~~~vv~~Ll~~~~~~~~~in~~D~~GnTpLHlAa~~g~~~~v~~~ 290 (507)
|.+|+||||+|+.+|+.++|++|++++ +.+|.+|.+|+||||+|+..|+.+++.
T Consensus 111 ~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g-----------------a~~~~~d~~g~t~L~~A~~~~~~~~~~-- 171 (232)
T 2rfa_A 111 HYRPHNLIYYGEHPLSFAACVGSEEIVRLLIEHG-----------------ADIRAQDSLGNTVLHILILQPNKTFAC-- 171 (232)
T ss_dssp SCCTTCSCCCCSSHHHHHHHHTCHHHHHHHHHTT-----------------CCTTCCCTTSCCHHHHHHTCSCHHHHH--
T ss_pred eecccccccCCCCHHHHHHHcCCHHHHHHHHHCC-----------------CCCCCCCCCCCCHHHHHHHcCChHHHH--
Confidence 347999999999999999666666553 457999999999999999999877541
Q ss_pred chhhhhHHHHHHhhhhhccCC---ccccccccCCCCCccccccccc
Q 039657 291 GAALQMQWEIKWYQFVKKSMP---RHFFTRFNDNGKTPKEVFTETH 333 (507)
Q Consensus 291 gaal~~~~el~w~~~v~~~~~---~~~~~~~N~~G~Tpldl~~~~~ 333 (507)
.-++++ ++.... ....+.+|++|+||++++....
T Consensus 172 -------~i~~~L--l~~g~~~~~~~~~~~~~~~g~tpl~~A~~~g 208 (232)
T 2rfa_A 172 -------QMYNLL--LSYDGGDHLKSLELVPNNQGLTPFKLAGVEG 208 (232)
T ss_dssp -------HHHHHH--HHTTCSCSSCCGGGCCCTTSCCHHHHHHHHT
T ss_pred -------HHHHHH--HhcCCchhhhhhhccCCCCCCCHHHHHHHcC
Confidence 001111 111000 1112588999999999987653
No 45
>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium}
Probab=99.84 E-value=1.3e-21 Score=181.60 Aligned_cols=137 Identities=12% Similarity=0.200 Sum_probs=116.4
Q ss_pred cccCCCCCChHHHHHHHcCCHHHHHHHhhhCCcccccccCCCCcHHHHHHHcCC--------------cccCCCCCCccc
Q 039657 161 AQSGTEKMDNKILLAAKIGVTEMVDRFLKSYPAVIQELNTSEKNLVLLTFEKKN--------------AQQSGRKETPML 226 (507)
Q Consensus 161 ~~~~d~~g~TpLh~Aa~~G~~~~v~~Ll~~~~~~~~~~d~~G~tpLh~A~~~~~--------------~~~d~~g~TpLH 226 (507)
.+.+|..|+||||+||..|+.++++.|++.++++ +.+|.+|+||||+|+..++ +.+|..|+||||
T Consensus 28 ~n~~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~ 106 (192)
T 2rfm_A 28 RNYRDSYNRTPLMVACMLGMENAIDKLVENFDKL-EDKDIEGSTALIWAVKNNRLGIAEKLLSKGSNVNTKDFSGKTPLM 106 (192)
T ss_dssp HTCCCTTCCCHHHHHHHHTCGGGHHHHHHHHCCT-TCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTSCCHHH
T ss_pred HhCcCCCCCCHHHHHHHcCCHHHHHHHHHhcccc-ccccccCccHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHH
Confidence 3567889999999999999999999999999987 8899999999999999988 678999999999
Q ss_pred hhhhcCCHHHHHHHHhhCCchHHHHHHHhcccccccccccccCCCCcHHHHHHhcCCCcccccCchhhhhHHHHHHhhhh
Q 039657 227 IAARMGVTEMVEQILDTFPANQYLQALLNRKILGESIFRQVDSQGNSALHLAAKFGDHRPWLLPGAALQMQWEIKWYQFV 306 (507)
Q Consensus 227 ~Aa~~g~~~iv~~Ll~~~~~~~vv~~Ll~~~~~~~~~in~~D~~GnTpLHlAa~~g~~~~v~~~gaal~~~~el~w~~~v 306 (507)
+|+..|+.+++++|++++ ..++.+|..|+||||+|+..|+.++++. .+
T Consensus 107 ~A~~~~~~~~v~~Ll~~g-----------------~~~~~~~~~g~t~L~~A~~~~~~~~v~~---------------Ll 154 (192)
T 2rfm_A 107 WSIIFGYSEMSYFLLEHG-----------------ANVNDRNLEGETPLIVASKYGRSEIVKK---------------LL 154 (192)
T ss_dssp HHHHHTCHHHHHHHHHTT-----------------CCSSCCCTTCCCHHHHHHHHTCHHHHHH---------------HH
T ss_pred HHHHcCCHHHHHHHHHCC-----------------CCCCCCCCCCCCHHHHHHHcCCHHHHHH---------------HH
Confidence 999999999666666553 4578999999999999999999876531 11
Q ss_pred hccCCccccccccCCCCCccccccccc
Q 039657 307 KKSMPRHFFTRFNDNGKTPKEVFTETH 333 (507)
Q Consensus 307 ~~~~~~~~~~~~N~~G~Tpldl~~~~~ 333 (507)
+ ...+.+.+|.+|.||++++....
T Consensus 155 ~---~ga~~~~~~~~g~t~l~~A~~~~ 178 (192)
T 2rfm_A 155 E---LGADISARDLTGLTAEASARIFG 178 (192)
T ss_dssp H---TTCCTTCBCTTSCBHHHHHHHTT
T ss_pred H---CCCCCCCcCCCCCCHHHHHHHhC
Confidence 1 13456789999999999986653
No 46
>1sw6_A Regulatory protein SWI6; transcription regulation, ankyrin repeats, cell-cycle; 2.10A {Saccharomyces cerevisiae} SCOP: d.211.1.1
Probab=99.84 E-value=2e-21 Score=196.57 Aligned_cols=174 Identities=18% Similarity=0.154 Sum_probs=117.7
Q ss_pred ccc-ccCCCCcHHHHhhcCCCcccCCCCccchhhhhhccccCCCCCCCCCCCCCCchhhHHHHHHHHHHHHHHHhcCCch
Q 039657 2 VNS-VNENGLTPLHILASKPNAFESSSRLGLFDSIIYCCIDLSKKDDGEDQLFPPNYATCVLLFKVMMKAMLIVLGLGIW 80 (507)
Q Consensus 2 v~~-~D~~G~TPLh~lA~~p~~f~Sg~~l~~~~~~iy~~~~v~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~g~~ 80 (507)
+|. +|.+|.||||++|+ ..+...++.||-+...++..+... ..|.+
T Consensus 123 vn~~~d~~g~TpLh~Aa~-------~g~~~~v~~Ll~~Gad~n~~d~~g--~TpLh------------------------ 169 (327)
T 1sw6_A 123 LNIPVDEHGNTPLHWLTS-------IANLELVKHLVKHGSNRLYGDNMG--ESCLV------------------------ 169 (327)
T ss_dssp SCSCCSTTCCCHHHHHHH-------TTCHHHHHHHHHTTCCTTBCCTTC--CCHHH------------------------
T ss_pred cccccCCCCCcHHHHHHH-------cCCHHHHHHHHHcCCCCCCcCCCC--CCHHH------------------------
Confidence 466 89999999999995 446778888888887776443211 12222
Q ss_pred hhhHHHHHHHHHhhHHHHHHHHHHhhcccccccCCCCCCCCCCCCcccccccCCCCCCCCCccccccccccccccccCCC
Q 039657 81 RINHITEKKERHTWAIQVMCELVQHASLYKYEDNGPKRRNSGPKEDEEAFSVSETLPVPDTGEISHQNKSTNHKKIENGS 160 (507)
Q Consensus 81 ~i~~i~~~k~~h~~a~~i~~~Ll~~~~~~~~~~~g~~~~~p~~~~d~~~~~~~~~~~~p~~~e~~~~~~~~~~~~~~~~~ 160 (507)
++....|....++++.|++.+.. +
T Consensus 170 -----~A~~~g~~~~~~~~~~ll~~~~~---------------------------------------------------~ 193 (327)
T 1sw6_A 170 -----KAVKSVNNYDSGTFEALLDYLYP---------------------------------------------------C 193 (327)
T ss_dssp -----HHHHSSHHHHTTCHHHHHHHHGG---------------------------------------------------G
T ss_pred -----HHHHhcccccHHHHHHHHHhhhc---------------------------------------------------c
Confidence 22222232223455566666411 0
Q ss_pred cccCCCCCChHHHHHHH----cCCHHHHHHHhhh--------------------CCcccccccCCCCcHHHHHHH-----
Q 039657 161 AQSGTEKMDNKILLAAK----IGVTEMVDRFLKS--------------------YPAVIQELNTSEKNLVLLTFE----- 211 (507)
Q Consensus 161 ~~~~d~~g~TpLh~Aa~----~G~~~~v~~Ll~~--------------------~~~~~~~~d~~G~tpLh~A~~----- 211 (507)
.+.+|..|+||||+||. .|+.++++.|++. +.++ +.+|.+|+||||.|+.
T Consensus 194 ~~~~d~~g~tpLh~A~~~~~~~g~~~~v~~Ll~~~~~~~~~~~~~~i~~~~~~~g~~~-~~~~~~g~t~L~~a~~~~~Ll 272 (327)
T 1sw6_A 194 LILEDSMNRTILHHIIITSGMTGCSAAAKYYLDILMGWIVKKQNRPIQSGTNEKESKP-NDKNGERKDSILENLDLKWII 272 (327)
T ss_dssp GGEECTTCCCHHHHHHHHHTSTTCHHHHHHHHHHHHHHHHHGGGCCEEEC-----------------CHHHHHCSHHHHH
T ss_pred ccCCCCCCCCHHHHHHHHccccccHHHHHHHHHHHHHHHhcccchHHHhhhhcccCCc-ccccccCCChhHHHHHHHHHH
Confidence 13346789999999999 9999999999987 6665 7889999999999873
Q ss_pred -cCCcccCCCCCCccchhhhcCCHHHHHHHHhhCCchHHHHHHHhcccccccccccccCCCCcHHHHHHhcC
Q 039657 212 -KKNAQQSGRKETPMLIAARMGVTEMVEQILDTFPANQYLQALLNRKILGESIFRQVDSQGNSALHLAAKFG 282 (507)
Q Consensus 212 -~~~~~~d~~g~TpLH~Aa~~g~~~iv~~Ll~~~~~~~vv~~Ll~~~~~~~~~in~~D~~GnTpLHlAa~~g 282 (507)
.+-+.+|.+|+||||+||.+|+.++|++|++++ ++++.+|.+|+||||+|++.|
T Consensus 273 ~~~~n~~d~~G~TpLh~A~~~g~~~~v~~Ll~~G-----------------ad~~~~d~~G~TpL~~A~~~g 327 (327)
T 1sw6_A 273 ANMLNAQDSNGDTCLNIAARLGNISIVDALLDYG-----------------ADPFIANKSGLRPVDFGAGLE 327 (327)
T ss_dssp HHTTTCCCTTSCCHHHHHHHHCCHHHHHHHHHTT-----------------CCTTCCCTTSCCGGGGTCC--
T ss_pred HhCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcC-----------------CCCcccCCCCCCHHHHHHhcC
Confidence 245889999999999999999999666666553 457999999999999999865
No 47
>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A*
Probab=99.84 E-value=2.2e-21 Score=190.14 Aligned_cols=114 Identities=15% Similarity=0.055 Sum_probs=91.4
Q ss_pred CCCCCChHHHHHHHcCCHHHHHHHhhhCCcccccccC--------------CCCcHHHHHHHcCC---------------
Q 039657 164 GTEKMDNKILLAAKIGVTEMVDRFLKSYPAVIQELNT--------------SEKNLVLLTFEKKN--------------- 214 (507)
Q Consensus 164 ~d~~g~TpLh~Aa~~G~~~~v~~Ll~~~~~~~~~~d~--------------~G~tpLh~A~~~~~--------------- 214 (507)
.|..|+||||+||..|+.++|+.|++.++++ +.+|. .|+||||+|+..++
T Consensus 97 ~d~~g~tpL~~A~~~g~~~~v~~Ll~~ga~~-~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~ga 175 (273)
T 2pnn_A 97 SYYKGQTALHIAIERRNMTLVTLLVENGADV-QAAANGDFFKKTKGRPGFYFGELPLSLAACTNQLAIVKFLLQNSWQPA 175 (273)
T ss_dssp TTTTTCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCBCSGGGSSCSSSCCCCSCBSHHHHHHHTTCHHHHHHHHHCSSCCC
T ss_pred ccCCCCCHHHHHHHcCCHHHHHHHHHCCCCc-CccccccccccccccccccCCCCHHHHHHHcCCHHHHHHHHhcccCCC
Confidence 3668999999999999999999999999997 77776 79999999998775
Q ss_pred --cccCCCCCCccchhhhcCC---------HHHHHHHHhhCCchHHHHHHHhcccccccccccccCCCCcHHHHHHhcCC
Q 039657 215 --AQQSGRKETPMLIAARMGV---------TEMVEQILDTFPANQYLQALLNRKILGESIFRQVDSQGNSALHLAAKFGD 283 (507)
Q Consensus 215 --~~~d~~g~TpLH~Aa~~g~---------~~iv~~Ll~~~~~~~vv~~Ll~~~~~~~~~in~~D~~GnTpLHlAa~~g~ 283 (507)
+.+|.+|+||||+|+..|+ .+++++|++++++ + + .....++.+|.+|+||||+|+..|+
T Consensus 176 d~~~~d~~g~tpLh~A~~~~~~~~~~~~~~~~~v~~Ll~~ga~--~-----n---~~~~~~~~~d~~g~TpL~~A~~~g~ 245 (273)
T 2pnn_A 176 DISARDSVGNTVLHALVEVADNTVDNTKFVTSMYNEILILGAK--L-----H---PTLKLEEITNRKGLTPLALAASSGK 245 (273)
T ss_dssp CTTCCCTTSCCHHHHHHHHCCSCHHHHHHHHHHHHHHHHHHHH--H-----C---TTCCGGGCCCTTSCCHHHHHHHTTC
T ss_pred CceeeCCCCCcHHHHHHHccCcchhHHHHHHHHHHHHHHhhhh--c-----c---cccccccccCCCCCCHHHHHHHhCh
Confidence 4678999999999999998 6755555554332 0 0 0001124699999999999999999
Q ss_pred Ccccc
Q 039657 284 HRPWL 288 (507)
Q Consensus 284 ~~~v~ 288 (507)
.++++
T Consensus 246 ~~iv~ 250 (273)
T 2pnn_A 246 IGVLA 250 (273)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 88764
No 48
>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus}
Probab=99.84 E-value=5.7e-21 Score=192.43 Aligned_cols=148 Identities=15% Similarity=0.090 Sum_probs=122.8
Q ss_pred ccCCCCCChHHHHHHHcCCHHHHHHHhhhCCcccccccCCCCcHHHHHHHcCC--------------cccCCCCCCccch
Q 039657 162 QSGTEKMDNKILLAAKIGVTEMVDRFLKSYPAVIQELNTSEKNLVLLTFEKKN--------------AQQSGRKETPMLI 227 (507)
Q Consensus 162 ~~~d~~g~TpLh~Aa~~G~~~~v~~Ll~~~~~~~~~~d~~G~tpLh~A~~~~~--------------~~~d~~g~TpLH~ 227 (507)
+.+|..|.||||+||..|+.++|+.|++.++++ +.+|.+|+||||+|+..|+ +.+|.+|+||||+
T Consensus 52 ~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~g~t~L~~ 130 (351)
T 3utm_A 52 HASDGRKSTPLHLAAGYNRVRIVQLLLQHGADV-HAKDKGGLVPLHNACSYGHYEVTELLLKHGACVNAMDLWQFTPLHE 130 (351)
T ss_dssp CCSSTTCCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHH
T ss_pred ccCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC-CccCCCCCcHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCHHHH
Confidence 556788999999999999999999999999997 8899999999999999998 6788999999999
Q ss_pred hhhcCCHHHHHHHHhhCCc-------------------------------------------------------------
Q 039657 228 AARMGVTEMVEQILDTFPA------------------------------------------------------------- 246 (507)
Q Consensus 228 Aa~~g~~~iv~~Ll~~~~~------------------------------------------------------------- 246 (507)
|+.+|+.++|++|++++++
T Consensus 131 A~~~~~~~~v~~Ll~~g~~~~~~~~~g~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 210 (351)
T 3utm_A 131 AASKNRVEVCSLLLSHGADPTLVNCHGKSAVDMAPTPELRERLTYEFKGHSLLQAAREADLAKVKKTLALEIINFKQPQS 210 (351)
T ss_dssp HHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHCSSHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHTTTCCTTCCCTTT
T ss_pred HHHcCCHHHHHHHHHcCCCCccccCCCCcchHHHhhhhhHHHHHhhhcccHHHHHHHhccHHHHHHHHHhhcccccCCCC
Confidence 9999999999999998654
Q ss_pred ----------------hHHHHHHHhcccccccccccccCCCCcHHHHHHhcCCCcccccCchhhhhHHHHHHhhhhhccC
Q 039657 247 ----------------NQYLQALLNRKILGESIFRQVDSQGNSALHLAAKFGDHRPWLLPGAALQMQWEIKWYQFVKKSM 310 (507)
Q Consensus 247 ----------------~~vv~~Ll~~~~~~~~~in~~D~~GnTpLHlAa~~g~~~~v~~~gaal~~~~el~w~~~v~~~~ 310 (507)
..++++|++.+ ..+|.+|.+|+||||+|+..|+.+++++ + ++
T Consensus 211 ~~t~L~~A~~~~~~~~~~~~~~Ll~~g----~~~~~~~~~g~t~L~~A~~~g~~~~v~~-------------L--l~--- 268 (351)
T 3utm_A 211 HETALHCAVASLHPKRKQVAELLLRKG----ANVNEKNKDFMTPLHVAAERAHNDVMEV-------------L--HK--- 268 (351)
T ss_dssp CCCHHHHHHHCCSTTHHHHHHHHHHTT----CCTTCCCTTCCCHHHHHHHTTCHHHHHH-------------H--HH---
T ss_pred CCCHHHHHHHHhCccHHHHHHHHHHcC----CCcCCcCCCCCCHHHHHHHcCCHHHHHH-------------H--HH---
Confidence 12456677666 6778888888888888888888776531 0 11
Q ss_pred CccccccccCCCCCcccccccc
Q 039657 311 PRHFFTRFNDNGKTPKEVFTET 332 (507)
Q Consensus 311 ~~~~~~~~N~~G~Tpldl~~~~ 332 (507)
.+.+++.+|..|+||++++...
T Consensus 269 ~ga~~n~~d~~g~t~L~~A~~~ 290 (351)
T 3utm_A 269 HGAKMNALDSLGQTALHRAALA 290 (351)
T ss_dssp TTCCTTCCCTTSCCHHHHHHHH
T ss_pred CCCCCCCcCCCCCCHHHHHHHc
Confidence 2345678889999999888654
No 49
>3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A 4dx1_A 4dx2_A*
Probab=99.84 E-value=3.9e-21 Score=186.74 Aligned_cols=115 Identities=15% Similarity=0.107 Sum_probs=91.4
Q ss_pred cCCCCCChHHHHHHHcCCHHHHHHHhhhCCccccccc--------------CCCCcHHHHHHHcCC--------------
Q 039657 163 SGTEKMDNKILLAAKIGVTEMVDRFLKSYPAVIQELN--------------TSEKNLVLLTFEKKN-------------- 214 (507)
Q Consensus 163 ~~d~~g~TpLh~Aa~~G~~~~v~~Ll~~~~~~~~~~d--------------~~G~tpLh~A~~~~~-------------- 214 (507)
..|..|+||||+||..|+.++|+.|++.++++ +.+| ..|+||||+|+..|+
T Consensus 88 ~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~-~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~g 166 (260)
T 3jxi_A 88 DVYYRGQTALHIAIERRCKHYVELLVEKGADV-HAQARGRFFQPKDEGGYFYFGELPLSLAACTNQPHIVHYLTENGHKQ 166 (260)
T ss_dssp CSSEESBCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCEECCCSSSCCCCSCCSCSSHHHHHHHTTCHHHHHHHHHCSSCC
T ss_pred ccccCCCCHHHHHHHcCCHHHHHHHHhCCCCc-CccccccccCcccccccccCCCCHHHHHHHcCCHHHHHHHHhccccC
Confidence 33567999999999999999999999999997 7777 689999999998775
Q ss_pred ---cccCCCCCCccchhhhcCC---------HHHHHHHHhhCCchHHHHHHHhcccccccccccccCCCCcHHHHHHhcC
Q 039657 215 ---AQQSGRKETPMLIAARMGV---------TEMVEQILDTFPANQYLQALLNRKILGESIFRQVDSQGNSALHLAAKFG 282 (507)
Q Consensus 215 ---~~~d~~g~TpLH~Aa~~g~---------~~iv~~Ll~~~~~~~vv~~Ll~~~~~~~~~in~~D~~GnTpLHlAa~~g 282 (507)
+.+|.+|+||||+|+..|+ .+++++|++++++ + .......+.+|.+|+||||+|+..|
T Consensus 167 a~~~~~d~~g~TpLh~A~~~~~~~~~~~~~~~~~v~~Ll~~ga~--~--------~~~~~~~~~~d~~g~tpL~~A~~~g 236 (260)
T 3jxi_A 167 ADLRRQDSRGNTVLHALVAIADNTRENTKFVTKMYDLLLIKCAK--L--------FPDTNLEALLNNDGLSPLMMAAKTG 236 (260)
T ss_dssp CCTTCCCTTSCCHHHHHHHHCCSSHHHHHHHHHHHHHHHHHHHH--H--------CTTCCGGGCCCTTSCCHHHHHHHTT
T ss_pred CCCcccCCCCCcHHHHHHHhccCchhHHHHHHHHHHHHHHhCcc--c--------ccccchhhcccCCCCCHHHHHHHcC
Confidence 5678999999999998877 5655555444332 0 0001122789999999999999999
Q ss_pred CCcccc
Q 039657 283 DHRPWL 288 (507)
Q Consensus 283 ~~~~v~ 288 (507)
+.++++
T Consensus 237 ~~~~v~ 242 (260)
T 3jxi_A 237 KIGIFQ 242 (260)
T ss_dssp CHHHHH
T ss_pred CHHHHH
Confidence 988764
No 50
>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} SCOP: d.211.1.0 PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S*
Probab=99.84 E-value=2.2e-21 Score=175.43 Aligned_cols=138 Identities=19% Similarity=0.213 Sum_probs=114.6
Q ss_pred CCCCChHHHHHHHcCCHHHHHHHhhhCCcccccccCCCCcHHHHHHHcCC--------------cccCCCCCCccchhhh
Q 039657 165 TEKMDNKILLAAKIGVTEMVDRFLKSYPAVIQELNTSEKNLVLLTFEKKN--------------AQQSGRKETPMLIAAR 230 (507)
Q Consensus 165 d~~g~TpLh~Aa~~G~~~~v~~Ll~~~~~~~~~~d~~G~tpLh~A~~~~~--------------~~~d~~g~TpLH~Aa~ 230 (507)
+..|.||||.|++.|+.++++.|++.++......|..|+||||+|+..++ +.+|.+|+||||+|+.
T Consensus 5 ~~~~~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~ 84 (165)
T 3twr_A 5 NSEADRQLLEAAKAGDVETVKKLCTVQSVNCRDIEGRQSTPLHFAAGYNRVSVVEYLLQHGADVHAKDKGGLVPLHNACS 84 (165)
T ss_dssp -CHHHHHHHHHHHHTCHHHHHHHCCTTTTTCCCTTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHH
T ss_pred cchhhHHHHHHHHhCCHHHHHHHHHcCCCCccccccCCCCHHHHHHHcChHHHHHHHHhcCCCCCccCCCCCCHHHHHHH
Confidence 56789999999999999999999998776668889999999999999988 6789999999999999
Q ss_pred cCCHHHHHHHHhhCCchHHHHHHHhcccccccccccccCCCCcHHHHHHhcCCCcccccCchhhhhHHHHHHhhhhhccC
Q 039657 231 MGVTEMVEQILDTFPANQYLQALLNRKILGESIFRQVDSQGNSALHLAAKFGDHRPWLLPGAALQMQWEIKWYQFVKKSM 310 (507)
Q Consensus 231 ~g~~~iv~~Ll~~~~~~~vv~~Ll~~~~~~~~~in~~D~~GnTpLHlAa~~g~~~~v~~~gaal~~~~el~w~~~v~~~~ 310 (507)
.|+.+++++|++++ ..+|.+|..|+||||+|+..|+.++++. .++
T Consensus 85 ~~~~~~v~~Ll~~g-----------------~~~~~~~~~g~t~L~~A~~~~~~~~v~~---------------Ll~--- 129 (165)
T 3twr_A 85 YGHYEVAELLVKHG-----------------AVVNVADLWKFTPLHEAAAKGKYEICKL---------------LLQ--- 129 (165)
T ss_dssp TTCHHHHHHHHHTT-----------------CCTTCCCTTCCCHHHHHHHTTCHHHHHH---------------HHH---
T ss_pred cCcHHHHHHHHhCC-----------------CCCCCcCCCCCCHHHHHHHcCCHHHHHH---------------HHH---
Confidence 99999666666553 4578999999999999999999876531 111
Q ss_pred CccccccccCCCCCccccccccccccc
Q 039657 311 PRHFFTRFNDNGKTPKEVFTETHKDLV 337 (507)
Q Consensus 311 ~~~~~~~~N~~G~Tpldl~~~~~~~l~ 337 (507)
...+.+.+|.+|+||++++.+.+.+++
T Consensus 130 ~ga~~~~~~~~g~t~l~~a~~~~~~i~ 156 (165)
T 3twr_A 130 HGADPTKKNRDGNTPLDLVKDGDTDIQ 156 (165)
T ss_dssp TTCCTTCCCTTSCCTGGGSCTTCHHHH
T ss_pred cCCCCcccCCCCCChhHhHhcCChHHH
Confidence 134567899999999999877655443
No 51
>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A
Probab=99.83 E-value=1.6e-20 Score=177.72 Aligned_cols=107 Identities=23% Similarity=0.294 Sum_probs=95.8
Q ss_pred CCCCCChHHHHHHHcCCHHHHHHHhhhCCcccccccCCCCcHHHHHHHcCC--------------cccCCCCCCccchhh
Q 039657 164 GTEKMDNKILLAAKIGVTEMVDRFLKSYPAVIQELNTSEKNLVLLTFEKKN--------------AQQSGRKETPMLIAA 229 (507)
Q Consensus 164 ~d~~g~TpLh~Aa~~G~~~~v~~Ll~~~~~~~~~~d~~G~tpLh~A~~~~~--------------~~~d~~g~TpLH~Aa 229 (507)
.+..|.||||+|+..|+.++++.|++.++++ +.+|.+|+||||+|+..++ +.+|.+|+||||+|+
T Consensus 88 ~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~ 166 (223)
T 2f8y_A 88 RMHDGTTPLILAARLAVEGMLEDLINSHADV-NAVDDLGKSALHWAAAVNNVDAAVVLLKNGANKDMQNNREETPLFLAA 166 (223)
T ss_dssp CCTTCCCHHHHHHHHTCHHHHHHHHHTTCCT-TCBCTTSCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHH
T ss_pred CCCCCCcHHHHHHHhCcHHHHHHHHHcCCCC-cCcCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCcCHHHHHH
Confidence 3667999999999999999999999999997 8899999999999999987 678999999999999
Q ss_pred hcCCHHHHHHHHhhCCchHHHHHHHhcccccccccccccCCCCcHHHHHHhcCCCcccc
Q 039657 230 RMGVTEMVEQILDTFPANQYLQALLNRKILGESIFRQVDSQGNSALHLAAKFGDHRPWL 288 (507)
Q Consensus 230 ~~g~~~iv~~Ll~~~~~~~vv~~Ll~~~~~~~~~in~~D~~GnTpLHlAa~~g~~~~v~ 288 (507)
.+|+.++|++|+++++ .++.+|..|+||||+|+..|+.++++
T Consensus 167 ~~~~~~~v~~Ll~~ga-----------------~~~~~~~~g~t~l~~A~~~~~~~i~~ 208 (223)
T 2f8y_A 167 REGSYETAKVLLDHFA-----------------NRDITDHMDRLPRDIAQERMHHDIVR 208 (223)
T ss_dssp HHTCHHHHHHHHHTTC-----------------CTTCCCTTCCCHHHHHHHTTCHHHHH
T ss_pred HcCCHHHHHHHHHcCC-----------------CCccccccCCCHHHHHHHhcchHHHH
Confidence 9999996666666544 56889999999999999999988763
No 52
>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens}
Probab=99.83 E-value=1.3e-20 Score=186.72 Aligned_cols=149 Identities=12% Similarity=0.019 Sum_probs=125.8
Q ss_pred cccCCCCCChHHHHHHHcCCHHHHHHHhhhCCcccccccCCCCcHHHHHHHcCC--------------cccCCCCCCccc
Q 039657 161 AQSGTEKMDNKILLAAKIGVTEMVDRFLKSYPAVIQELNTSEKNLVLLTFEKKN--------------AQQSGRKETPML 226 (507)
Q Consensus 161 ~~~~d~~g~TpLh~Aa~~G~~~~v~~Ll~~~~~~~~~~d~~G~tpLh~A~~~~~--------------~~~d~~g~TpLH 226 (507)
.+..|..|+||||+||..|+.++|+.|++.++++ +.+|.+|+||||+|+..|+ +.+|.+|+||||
T Consensus 52 ~~~~~~~g~t~L~~Aa~~g~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~t~L~ 130 (285)
T 3d9h_A 52 LMGDAVSDWSPMHEAAIHGHQLSLRNLISQGWAV-NIITADHVSPLHEACLGGHLSCVKILLKHGAQVNGVTADWHTPLF 130 (285)
T ss_dssp TCSSSCCSCCHHHHHHHTTCHHHHHHHHHTTCCS-CEECTTCCCHHHHHHHTTCHHHHHHHHHTTCCSSCCCTTCCCHHH
T ss_pred ccCCCccCCCHHHHHHHcCCHHHHHHHHHCCCCC-CCcCCCCCCHHHHHHHCCcHHHHHHHHHCCCCCCCCCCCCCCHHH
Confidence 4567889999999999999999999999999987 8999999999999999988 678999999999
Q ss_pred hhhhcCCHHHHHHHHhhCCc-------------------hHHHHHHHhcccccccccccccCCCCcHHHHHHhcCCCccc
Q 039657 227 IAARMGVTEMVEQILDTFPA-------------------NQYLQALLNRKILGESIFRQVDSQGNSALHLAAKFGDHRPW 287 (507)
Q Consensus 227 ~Aa~~g~~~iv~~Ll~~~~~-------------------~~vv~~Ll~~~~~~~~~in~~D~~GnTpLHlAa~~g~~~~v 287 (507)
+|+..|+.++|++|++.+++ ..++++|++.+ ..++.+|.+|+||||+|+..|+.+++
T Consensus 131 ~A~~~~~~~~v~~Ll~~g~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g----~~~~~~d~~g~t~L~~A~~~~~~~~v 206 (285)
T 3d9h_A 131 NACVSGSWDCVNLLLQHGASVQPESDLASPIHEAARRGHVECVNSLIAYG----GNIDHKISHLGTPLYLACENQQRACV 206 (285)
T ss_dssp HHHHHTCHHHHHHHHHTTCCSSCSCTTSCHHHHHHHHTCHHHHHHHHHTT----CCTTCCBTTTBCHHHHHHHTTCHHHH
T ss_pred HHHHcCHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCC----CCCCCcCCCCCCHHHHHHHcCcHHHH
Confidence 99999999999999998766 13588899887 67899999999999999999998775
Q ss_pred ccCchhhhhHHHHHHhhhhhccCCccccccccCCCCCccccccccc
Q 039657 288 LLPGAALQMQWEIKWYQFVKKSMPRHFFTRFNDNGKTPKEVFTETH 333 (507)
Q Consensus 288 ~~~gaal~~~~el~w~~~v~~~~~~~~~~~~N~~G~Tpldl~~~~~ 333 (507)
+. .++. ..+.+ .|.+|.||++++....
T Consensus 207 ~~---------------Ll~~---ga~~~-~~~~g~t~L~~A~~~~ 233 (285)
T 3d9h_A 207 KK---------------LLES---GADVN-QGKGQDSPLHAVVRTA 233 (285)
T ss_dssp HH---------------HHHT---TCCTT-CCBTTBCHHHHHHHTT
T ss_pred HH---------------HHHC---CCCCC-CCCCCCCHHHHHHHcC
Confidence 31 1111 12233 4788999999886543
No 53
>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A
Probab=99.83 E-value=6.9e-21 Score=181.28 Aligned_cols=175 Identities=13% Similarity=0.094 Sum_probs=135.2
Q ss_pred cccccCCCCcHHHHhhcCCCcccCCCCccchhhhhhccccCCCCCCCCCCCCCCchhhHHHHHHHHHHHHHHHhcCCchh
Q 039657 2 VNSVNENGLTPLHILASKPNAFESSSRLGLFDSIIYCCIDLSKKDDGEDQLFPPNYATCVLLFKVMMKAMLIVLGLGIWR 81 (507)
Q Consensus 2 v~~~D~~G~TPLh~lA~~p~~f~Sg~~l~~~~~~iy~~~~v~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~g~~~ 81 (507)
++.+|.+|.||||++++ ..+...++.++-+...+...+... ..|.+
T Consensus 33 ~~~~~~~g~t~L~~A~~-------~g~~~~v~~Ll~~g~~~~~~~~~g--~t~L~------------------------- 78 (231)
T 3aji_A 33 ATRTDQDSRTALHWACS-------AGHTEIVEFLLQLGVPVNDKDDAG--WSPLH------------------------- 78 (231)
T ss_dssp GGCCCTTSCCHHHHHHH-------HTCHHHHHHHHHTTCCSCCCCTTS--CCHHH-------------------------
T ss_pred hhcCCCCCCCHHHHHHH-------cCcHHHHHHHHHhCCCCCCcCCCC--CCHHH-------------------------
Confidence 46789999999999995 346677888877766554332111 11111
Q ss_pred hhHHHHHHHHHhhHHHHHHHHHHhhcccccccCCCCCCCCCCCCcccccccCCCCCCCCCccccccccccccccccCCCc
Q 039657 82 INHITEKKERHTWAIQVMCELVQHASLYKYEDNGPKRRNSGPKEDEEAFSVSETLPVPDTGEISHQNKSTNHKKIENGSA 161 (507)
Q Consensus 82 i~~i~~~k~~h~~a~~i~~~Ll~~~~~~~~~~~g~~~~~p~~~~d~~~~~~~~~~~~p~~~e~~~~~~~~~~~~~~~~~~ 161 (507)
++.+..| .++++.|++++...
T Consensus 79 ----~A~~~~~---~~~v~~Ll~~g~~~---------------------------------------------------- 99 (231)
T 3aji_A 79 ----IAASAGX---DEIVKALLVKGAHV---------------------------------------------------- 99 (231)
T ss_dssp ----HHHHHTC---HHHHHHHHHTTCCT----------------------------------------------------
T ss_pred ----HHHHcCH---HHHHHHHHHcCCCC----------------------------------------------------
Confidence 1122223 37889999985433
Q ss_pred ccCCCCCChHHHHHHHcCCHHHHHHHhhhCCcccccccCCCCcHHHHHHHcCC--------------cccCCCCCCccch
Q 039657 162 QSGTEKMDNKILLAAKIGVTEMVDRFLKSYPAVIQELNTSEKNLVLLTFEKKN--------------AQQSGRKETPMLI 227 (507)
Q Consensus 162 ~~~d~~g~TpLh~Aa~~G~~~~v~~Ll~~~~~~~~~~d~~G~tpLh~A~~~~~--------------~~~d~~g~TpLH~ 227 (507)
+.+|..|.||||+|+..|+.++++.|++.++++ +.+|..|+||||+|+..++ +.+|.+|+||||+
T Consensus 100 ~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~ 178 (231)
T 3aji_A 100 NAVNQNGCTPLHYAASKNRHEIAVMLLEGGANP-DAKDHYDATAMHRAAAKGNLKMVHILLFYKASTNIQDTEGNTPLHL 178 (231)
T ss_dssp TCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTSCCHHHH
T ss_pred CCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC-CCcCCCCCcHHHHHHHcCCHHHHHHHHhcCCCccccCCCCCCHHHH
Confidence 233667999999999999999999999999997 8899999999999999987 6789999999999
Q ss_pred hhhcCCHHHHHHHHhhCCchHHHHHHHhcccccccccccccCCCCcHHHHHHhcCCCccc
Q 039657 228 AARMGVTEMVEQILDTFPANQYLQALLNRKILGESIFRQVDSQGNSALHLAAKFGDHRPW 287 (507)
Q Consensus 228 Aa~~g~~~iv~~Ll~~~~~~~vv~~Ll~~~~~~~~~in~~D~~GnTpLHlAa~~g~~~~v 287 (507)
|+.+|+.+++++|+++ | +.++.+|..|+||||+|+..++.+++
T Consensus 179 A~~~~~~~~v~~Ll~~-------------g----a~~~~~~~~g~t~l~~A~~~~~~~i~ 221 (231)
T 3aji_A 179 ACDEERVEEAKFLVTQ-------------G----ASIYIENKEEKTPLQVAKGGLGLILK 221 (231)
T ss_dssp HHHTTCHHHHHHHHHT-------------T----CCSCCCCTTSCCHHHHSCHHHHHHHH
T ss_pred HHHCCCHHHHHHHHHC-------------C----CCCCCCCCCCCCHHHHHHhhHHHHHH
Confidence 9999999966666655 3 45789999999999999988776654
No 54
>2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens}
Probab=99.83 E-value=3.2e-21 Score=185.30 Aligned_cols=131 Identities=11% Similarity=-0.060 Sum_probs=79.8
Q ss_pred CCCCChHHHHHHHcCCHHHHHHHhhhCCcccccccCCCCcHHHHHHHcCC--------------cccC-CCCCCccchh-
Q 039657 165 TEKMDNKILLAAKIGVTEMVDRFLKSYPAVIQELNTSEKNLVLLTFEKKN--------------AQQS-GRKETPMLIA- 228 (507)
Q Consensus 165 d~~g~TpLh~Aa~~G~~~~v~~Ll~~~~~~~~~~d~~G~tpLh~A~~~~~--------------~~~d-~~g~TpLH~A- 228 (507)
|..|+||||+||..|+.++|+.|++.++++ +.+|.+|+||||+|+..|+ +.+| .+|+||||+|
T Consensus 51 d~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~-n~~d~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~~~~~~~~g~tpL~~A~ 129 (229)
T 2vge_A 51 NEEGITALHNAICGANYSIVDFLITAGANV-NSPDSHGWTPLHCAASCNDTVICMALVQHGAAIFATTLSDGATAFEKCD 129 (229)
T ss_dssp CTTSCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCCTTCCCSSTTCCTGGGCC
T ss_pred CCCCCCHHHHHHHcCCHHHHHHHHHCCCCC-CCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCcccccCCCCCCHHHHHH
Confidence 455777777777777777777777777665 6667777777777777665 3343 4677777777
Q ss_pred -hhcCCHHHHHHHHhhCCchHHHHHHHhcccccccccccccCCCCcHHHHHHhcCCCcccccCchhhhhHHHHHHhhhhh
Q 039657 229 -ARMGVTEMVEQILDTFPANQYLQALLNRKILGESIFRQVDSQGNSALHLAAKFGDHRPWLLPGAALQMQWEIKWYQFVK 307 (507)
Q Consensus 229 -a~~g~~~iv~~Ll~~~~~~~vv~~Ll~~~~~~~~~in~~D~~GnTpLHlAa~~g~~~~v~~~gaal~~~~el~w~~~v~ 307 (507)
+..|+.+++++|++. + +.++.+|..|.||||.++.....++..
T Consensus 130 a~~~~~~~~v~~Ll~~-------------g----a~~~~~~~~~~~~l~~~~~~~~~~~ll------------------- 173 (229)
T 2vge_A 130 PYREGYADCATYLADV-------------E----QSMGLMNSGAVYALWDYSAEFGDELSF------------------- 173 (229)
T ss_dssp TTSTTHHHHHHHHHHH-------------H----HHTTTSGGGEEEESSCBCCSSTTBCCB-------------------
T ss_pred HHhcChHHHHHHHHHc-------------C----CCcccccCCchHHHHHHhhccccccCc-------------------
Confidence 777777744444443 2 334555666666666444333222211
Q ss_pred ccCCccccccccCCCCCcccccccc
Q 039657 308 KSMPRHFFTRFNDNGKTPKEVFTET 332 (507)
Q Consensus 308 ~~~~~~~~~~~N~~G~Tpldl~~~~ 332 (507)
..-.....+.+|.+|+||++++...
T Consensus 174 ~~ga~~~~~~~d~~G~TpL~~A~~~ 198 (229)
T 2vge_A 174 REGESVTVLRRDGPEETDWWWAALH 198 (229)
T ss_dssp CTTCEEEEEESSCTTCSSEEEEEET
T ss_pred cccccccccccCCCcccHHHHHHHc
Confidence 0011113567888889998888665
No 55
>4hbd_A KN motif and ankyrin repeat domain-containing Pro; structural genomics consortium, SGC, protein binding; 1.72A {Homo sapiens}
Probab=99.83 E-value=7.1e-21 Score=187.81 Aligned_cols=139 Identities=17% Similarity=0.192 Sum_probs=115.1
Q ss_pred cccCCCCCChHHHHHHHcCCHHHHHHHhhhCCcccccccCCCCcHHHHHHHcCC-------------------cccCCCC
Q 039657 161 AQSGTEKMDNKILLAAKIGVTEMVDRFLKSYPAVIQELNTSEKNLVLLTFEKKN-------------------AQQSGRK 221 (507)
Q Consensus 161 ~~~~d~~g~TpLh~Aa~~G~~~~v~~Ll~~~~~~~~~~d~~G~tpLh~A~~~~~-------------------~~~d~~g 221 (507)
+|.+|..|+||||+||..|+.++|+.|++.++..++..|..|+||||+|+.... +..|..|
T Consensus 104 ~n~~d~~g~T~Lh~A~~~g~~~~v~~Ll~~g~~~~~~~~~~g~tpL~~a~~~~~~~~~~~~~v~~Ll~~g~~~~~~~~~g 183 (276)
T 4hbd_A 104 VNIADSNGNTALHYSVSHANFPVVQQLLDSGVCKVDKQNRAGYSPIMLTALATLKTQDDIETVLQLFRLGNINAKASQAG 183 (276)
T ss_dssp HTCCCTTSCCHHHHHHHTTCHHHHHHHHHTSCCCTTCCCTTSCCHHHHGGGCCCCSHHHHHHHHHHHHHSCTTCCCTTTC
T ss_pred CcCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCcCCCCCCCCCCHHHHHHHHHhhhhhhHHHHHHHHHcCCCccccCCCC
Confidence 466788999999999999999999999999994459999999999999994321 5678889
Q ss_pred CCccchhhhcCCHHHHHHHHhhCCchHHHHHHHhcccccccccccccCCCCcHHHHHHhcCCCcccccCchhhhhHHHHH
Q 039657 222 ETPMLIAARMGVTEMVEQILDTFPANQYLQALLNRKILGESIFRQVDSQGNSALHLAAKFGDHRPWLLPGAALQMQWEIK 301 (507)
Q Consensus 222 ~TpLH~Aa~~g~~~iv~~Ll~~~~~~~vv~~Ll~~~~~~~~~in~~D~~GnTpLHlAa~~g~~~~v~~~gaal~~~~el~ 301 (507)
+||||+|+.+|+.++|++|++.+ +.+|.+|.+|+||||+|+..|+.+++++
T Consensus 184 ~tpLh~A~~~g~~~~v~~Ll~~g-----------------ad~n~~d~~G~TpLh~A~~~g~~~iv~~------------ 234 (276)
T 4hbd_A 184 QTALMLAVSHGRVDVVKALLACE-----------------ADVNVQDDDGSTALMCACEHGHKEIAGL------------ 234 (276)
T ss_dssp CCHHHHHHHTTCHHHHHHHHHTT-----------------CCTTCCCTTSCCHHHHHHHHTCHHHHHH------------
T ss_pred CCHHHHHHHcCCHHHHHHHHhCC-----------------CCCCCCCCCCCCHHHHHHHCCCHHHHHH------------
Confidence 99999999999999666666553 4579999999999999999999877632
Q ss_pred HhhhhhccCCccccccccCCCCCccccccccc
Q 039657 302 WYQFVKKSMPRHFFTRFNDNGKTPKEVFTETH 333 (507)
Q Consensus 302 w~~~v~~~~~~~~~~~~N~~G~Tpldl~~~~~ 333 (507)
.++ ..+.+.+.+|++|+||++++....
T Consensus 235 ---Ll~--~~gad~~~~d~~g~TpL~~A~~~g 261 (276)
T 4hbd_A 235 ---LLA--VPSCDISLTDRDGSTALMVALDAG 261 (276)
T ss_dssp ---HHT--STTCCTTCCCTTSCCHHHHHHHHT
T ss_pred ---HHh--cCCCCCcCcCCCCCCHHHHHHHcC
Confidence 011 134567889999999999987653
No 56
>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E
Probab=99.83 E-value=8.5e-21 Score=181.77 Aligned_cols=137 Identities=16% Similarity=0.117 Sum_probs=115.3
Q ss_pred cccCCCCCChHHHHHHHcCCHHHHHHHhhhCCcccccccCCCCcHHHHHHHcCC--------------------cccCCC
Q 039657 161 AQSGTEKMDNKILLAAKIGVTEMVDRFLKSYPAVIQELNTSEKNLVLLTFEKKN--------------------AQQSGR 220 (507)
Q Consensus 161 ~~~~d~~g~TpLh~Aa~~G~~~~v~~Ll~~~~~~~~~~d~~G~tpLh~A~~~~~--------------------~~~d~~ 220 (507)
++..|..|.||||+||..|+.++++.|++.++++ +.+|.+|+||||+|+..++ +..|..
T Consensus 38 ~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~ 116 (236)
T 1ikn_D 38 LNFQNNLQQTPLHLAVITNQPEIAEALLGAGCDP-ELRDFRGNTPLHLACEQGCLASVGVLTQSCTTPHLHSILKATNYN 116 (236)
T ss_dssp CCCCCTTCCCHHHHHHHTTCHHHHHCCCSCCCCS-CCCCTTCCCHHHHHHHHTCHHHHHHHHHSTTTTSSSCGGGCCCTT
T ss_pred hhccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC-CCcCCCCCCHHHHHHHcCCHHHHHHHHhcccchhHHHHhhccCCC
Confidence 3566888999999999999999999999999997 8899999999999999886 356788
Q ss_pred CCCccchhhhcCCHHHHHHHHhhCCchHHHHHHHhcccccccccccccC-CCCcHHHHHHhcCCCcccccCchhhhhHHH
Q 039657 221 KETPMLIAARMGVTEMVEQILDTFPANQYLQALLNRKILGESIFRQVDS-QGNSALHLAAKFGDHRPWLLPGAALQMQWE 299 (507)
Q Consensus 221 g~TpLH~Aa~~g~~~iv~~Ll~~~~~~~vv~~Ll~~~~~~~~~in~~D~-~GnTpLHlAa~~g~~~~v~~~gaal~~~~e 299 (507)
|+||||+|+.+|+.++|++|+++++ .++.+|. .|+||||+|+..|+.+++++
T Consensus 117 g~t~L~~A~~~~~~~~v~~Ll~~g~-----------------~~~~~~~~~g~tpL~~A~~~~~~~~v~~---------- 169 (236)
T 1ikn_D 117 GHTCLHLASIHGYLGIVELLVSLGA-----------------DVNAQEPCNGRTALHLAVDLQNPDLVSL---------- 169 (236)
T ss_dssp CCCHHHHHHHTTCHHHHHHHHHHTC-----------------CTTCCCTTTCCCHHHHHHHTTCHHHHHH----------
T ss_pred CCCHHHHHHHcCCHHHHHHHHHcCC-----------------CCCCCCCCCCCCHHHHHHHcCCHHHHHH----------
Confidence 9999999999999997766666544 5788887 99999999999999877532
Q ss_pred HHHhhhhhccCCccccccccCCCCCccccccccc
Q 039657 300 IKWYQFVKKSMPRHFFTRFNDNGKTPKEVFTETH 333 (507)
Q Consensus 300 l~w~~~v~~~~~~~~~~~~N~~G~Tpldl~~~~~ 333 (507)
.++ .+.+++.+|..|+||++++....
T Consensus 170 -----Ll~---~ga~~~~~~~~g~tpl~~A~~~~ 195 (236)
T 1ikn_D 170 -----LLK---CGADVNRVTYQGYSPYQLTWGRP 195 (236)
T ss_dssp -----HHT---TTCCSCCCCTTCCCGGGGCTTSS
T ss_pred -----HHH---cCCCCCcccCCCCCHHHHHHccC
Confidence 111 24467889999999999987653
No 57
>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A
Probab=99.82 E-value=8e-21 Score=172.03 Aligned_cols=131 Identities=12% Similarity=0.074 Sum_probs=111.8
Q ss_pred CCChHHHHHHHcCCHHHHHHHhhhCCcccccccCCCCcHHHHHHHcCC--------------cccCCCCCCccchhhhcC
Q 039657 167 KMDNKILLAAKIGVTEMVDRFLKSYPAVIQELNTSEKNLVLLTFEKKN--------------AQQSGRKETPMLIAARMG 232 (507)
Q Consensus 167 ~g~TpLh~Aa~~G~~~~v~~Ll~~~~~~~~~~d~~G~tpLh~A~~~~~--------------~~~d~~g~TpLH~Aa~~g 232 (507)
.|.||||.||..|+.++++.|++.++++ +.+|.+|+||||+|+..++ +.+|..|+||||+|+.+|
T Consensus 2 ~~~t~L~~A~~~g~~~~v~~ll~~~~~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~ 80 (167)
T 3v31_A 2 ANSLSVHQLAAQGEMLYLATRIEQENVI-NHTDEEGFTPLMWAAAHGQIAVVEFLLQNGADPQLLGKGRESALSLACSKG 80 (167)
T ss_dssp TTCCCHHHHHHTTCHHHHHHHHHHSSCT-TCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHT
T ss_pred CCcchHHHHHHCCCHHHHHHHHHcCCCc-CCCCCCCCCHHHHHHHCCCHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHcC
Confidence 5899999999999999999999999886 8999999999999999988 678899999999999999
Q ss_pred CHHHHHHHHhhCCchHHHHHHHhcccccccccccccCCCCcHHHHHHhcCCCcccccCchhhhhHHHHHHhhhhhccCCc
Q 039657 233 VTEMVEQILDTFPANQYLQALLNRKILGESIFRQVDSQGNSALHLAAKFGDHRPWLLPGAALQMQWEIKWYQFVKKSMPR 312 (507)
Q Consensus 233 ~~~iv~~Ll~~~~~~~vv~~Ll~~~~~~~~~in~~D~~GnTpLHlAa~~g~~~~v~~~gaal~~~~el~w~~~v~~~~~~ 312 (507)
+.+++++|++++ ..++.+|..|+||||+|+..|+.++++. + ++ .+
T Consensus 81 ~~~~v~~Ll~~g-----------------~~~~~~~~~g~t~L~~A~~~~~~~~v~~-------------L--l~---~g 125 (167)
T 3v31_A 81 YTDIVKMLLDCG-----------------VDVNEYDWNGGTPLLYAVHGNHVKCVKM-------------L--LE---SG 125 (167)
T ss_dssp CHHHHHHHHHHT-----------------CCTTCCCTTSCCHHHHHHHTTCHHHHHH-------------H--HH---TT
T ss_pred CHHHHHHHHHCC-----------------CCCCcCCCCCCCHHHHHHHcCCHHHHHH-------------H--HH---cC
Confidence 999777666654 4578999999999999999999876531 1 11 23
Q ss_pred cccccccCCCCCccccccccc
Q 039657 313 HFFTRFNDNGKTPKEVFTETH 333 (507)
Q Consensus 313 ~~~~~~N~~G~Tpldl~~~~~ 333 (507)
.+.+.+|.+|+||++++....
T Consensus 126 ~~~~~~~~~g~t~l~~A~~~~ 146 (167)
T 3v31_A 126 ADPTIETDSGYNSMDLAVALG 146 (167)
T ss_dssp CCTTCCCTTSCCHHHHHHHHT
T ss_pred CCCCCcCCCCCCHHHHHHHcC
Confidence 456789999999999987653
No 58
>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C*
Probab=99.82 E-value=3.7e-20 Score=168.42 Aligned_cols=106 Identities=22% Similarity=0.199 Sum_probs=95.0
Q ss_pred CCCCCChHHHHHHHcCCHHHHHHHhhhCCcccccccCCCCcHHHHHHHcCC--------------cccCCCCCCccchhh
Q 039657 164 GTEKMDNKILLAAKIGVTEMVDRFLKSYPAVIQELNTSEKNLVLLTFEKKN--------------AQQSGRKETPMLIAA 229 (507)
Q Consensus 164 ~d~~g~TpLh~Aa~~G~~~~v~~Ll~~~~~~~~~~d~~G~tpLh~A~~~~~--------------~~~d~~g~TpLH~Aa 229 (507)
+|..|.||||+|+..|+.++++.|++.++++ +.+|.+|+||||+|+..++ +.+|.+|+||||+|+
T Consensus 43 ~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~ 121 (169)
T 2y1l_E 43 EDASGWTPLHLAAFNGHLEIVEVLLKNGADV-NAVDHAGMTPLRLAALFGHLEIVEVLLKNGADVNANDMEGHTPLHLAA 121 (169)
T ss_dssp CCTTSCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHH
T ss_pred CCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC-CccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHH
Confidence 3667999999999999999999999999987 8899999999999999987 678999999999999
Q ss_pred hcCCHHHHHHHHhhCCchHHHHHHHhcccccccccccccCCCCcHHHHHHhcCCCccc
Q 039657 230 RMGVTEMVEQILDTFPANQYLQALLNRKILGESIFRQVDSQGNSALHLAAKFGDHRPW 287 (507)
Q Consensus 230 ~~g~~~iv~~Ll~~~~~~~vv~~Ll~~~~~~~~~in~~D~~GnTpLHlAa~~g~~~~v 287 (507)
.+|+.++|++|++++ +.++.+|..|+||||+|+..|+.+++
T Consensus 122 ~~~~~~~v~~Ll~~g-----------------~~~~~~~~~g~t~l~~A~~~~~~~~~ 162 (169)
T 2y1l_E 122 MFGHLEIVEVLLKNG-----------------ADVNAQDKFGKTAFDISIDNGNEDLA 162 (169)
T ss_dssp HTTCHHHHHHHHHTT-----------------CCTTCCCTTSCCHHHHHHHTTCHHHH
T ss_pred HcCCHHHHHHHHHcC-----------------CCCCCcCCCCCCHHHHHHHhCCHHHH
Confidence 999999666666553 45789999999999999999997765
No 59
>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A
Probab=99.82 E-value=1.6e-20 Score=170.85 Aligned_cols=108 Identities=19% Similarity=0.146 Sum_probs=96.4
Q ss_pred cCCCCCChHHHHHHHcCCHHHHHHHhhhCCcccccccCCCCcHHHHHHHcCC--------------cccCCCCCCccchh
Q 039657 163 SGTEKMDNKILLAAKIGVTEMVDRFLKSYPAVIQELNTSEKNLVLLTFEKKN--------------AQQSGRKETPMLIA 228 (507)
Q Consensus 163 ~~d~~g~TpLh~Aa~~G~~~~v~~Ll~~~~~~~~~~d~~G~tpLh~A~~~~~--------------~~~d~~g~TpLH~A 228 (507)
.+|..|+||||+||..|+.++++.|++.++++ +.+|.+|+||||+|+..++ +.+|.+|+||||+|
T Consensus 31 ~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A 109 (172)
T 3v30_A 31 KPDERGFTPLIWASAFGEIETVRFLLEWGADP-HILAKERESALSLASTGGYTDIVGLLLERDVDINIYDWNGGTPLLYA 109 (172)
T ss_dssp CCCTTSCCHHHHHHHTTCHHHHHHHHHHTCCT-TCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCCTTCCCTTSCCHHHHH
T ss_pred CCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCc-hhhcccCCCHHHHHHHCCCHHHHHHHHHcCCCCCCCCCCCCCHHHHH
Confidence 34668999999999999999999999999997 8899999999999999987 67899999999999
Q ss_pred hhcCCHHHHHHHHhhCCchHHHHHHHhcccccccccccccCCCCcHHHHHHhcCCCcccc
Q 039657 229 ARMGVTEMVEQILDTFPANQYLQALLNRKILGESIFRQVDSQGNSALHLAAKFGDHRPWL 288 (507)
Q Consensus 229 a~~g~~~iv~~Ll~~~~~~~vv~~Ll~~~~~~~~~in~~D~~GnTpLHlAa~~g~~~~v~ 288 (507)
+.+|+.++|++|++++ +.++.+|.+|+||||+|+..|+.++++
T Consensus 110 ~~~~~~~~v~~Ll~~g-----------------a~~~~~~~~g~t~l~~A~~~~~~~~~~ 152 (172)
T 3v30_A 110 VRGNHVKCVEALLARG-----------------ADLTTEADSGYTPMDLAVALGYRKVQQ 152 (172)
T ss_dssp HHTTCHHHHHHHHHTT-----------------CCTTCCCTTSCCHHHHHHHHTCHHHHH
T ss_pred HHcCCHHHHHHHHHcC-----------------CCccccCCCCCCHHHHHHHhCcHHHHH
Confidence 9999999666666553 457899999999999999999988763
No 60
>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1
Probab=99.82 E-value=3.8e-20 Score=165.37 Aligned_cols=105 Identities=12% Similarity=0.076 Sum_probs=94.4
Q ss_pred CCCCChHHHHHHHcCCHHHHHHHhhhCCcccccccCCCCcHHHHHHHcCC--------------cccCCCCCCccchhhh
Q 039657 165 TEKMDNKILLAAKIGVTEMVDRFLKSYPAVIQELNTSEKNLVLLTFEKKN--------------AQQSGRKETPMLIAAR 230 (507)
Q Consensus 165 d~~g~TpLh~Aa~~G~~~~v~~Ll~~~~~~~~~~d~~G~tpLh~A~~~~~--------------~~~d~~g~TpLH~Aa~ 230 (507)
+..|.||||+|+..|+.++++.|++.++++ +.+|.+|+||||+|+..++ +.+|.+|+||||+|+.
T Consensus 31 ~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~ 109 (153)
T 1awc_B 31 DWLGTSPLHLAAQYGHFSTTEVLLRAGVSR-DARTKVDRTPLHMAASEGHANIVEVLLKHGADVNAKDMLKMTALHWATE 109 (153)
T ss_dssp CTTCCCHHHHHHHHTCHHHHHHHHTTTCCT-TCCCTTCCCHHHHHHHHTCHHHHHHHHTTTCCTTCCCTTSCCHHHHHHH
T ss_pred CCCCCCHHHHHHHcCCHHHHHHHHHcCCCC-CCCCCCCCCHHHHHHHcChHHHHHHHHHcCCCCCCCCCCCCCHHHHHHH
Confidence 456999999999999999999999999997 8899999999999999887 6789999999999999
Q ss_pred cCCHHHHHHHHhhCCchHHHHHHHhcccccccccccccCCCCcHHHHHHhcCCCccc
Q 039657 231 MGVTEMVEQILDTFPANQYLQALLNRKILGESIFRQVDSQGNSALHLAAKFGDHRPW 287 (507)
Q Consensus 231 ~g~~~iv~~Ll~~~~~~~vv~~Ll~~~~~~~~~in~~D~~GnTpLHlAa~~g~~~~v 287 (507)
+|+.+++++|++++ +.++.+|..|+||||+|+..|+.+++
T Consensus 110 ~~~~~~v~~Ll~~g-----------------a~~~~~~~~g~t~l~~A~~~~~~~i~ 149 (153)
T 1awc_B 110 HNHQEVVELLIKYG-----------------ADVHTQSKFCKTAFDISIDNGNEDLA 149 (153)
T ss_dssp TTCHHHHHHHHHTT-----------------CCTTCCCTTSCCHHHHHHHTTCHHHH
T ss_pred cCCHHHHHHHHHcC-----------------CCccccCCCCCCHHHHHHHcCCHHHH
Confidence 99999666666553 45789999999999999999997765
No 61
>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A
Probab=99.82 E-value=2e-20 Score=168.25 Aligned_cols=107 Identities=14% Similarity=0.137 Sum_probs=96.0
Q ss_pred CCCCCChHHHHHHHcCCHHHHHHHhhhCCcccccccCCCCcHHHHHHHcCC--------------cccCCCCCCccchhh
Q 039657 164 GTEKMDNKILLAAKIGVTEMVDRFLKSYPAVIQELNTSEKNLVLLTFEKKN--------------AQQSGRKETPMLIAA 229 (507)
Q Consensus 164 ~d~~g~TpLh~Aa~~G~~~~v~~Ll~~~~~~~~~~d~~G~tpLh~A~~~~~--------------~~~d~~g~TpLH~Aa 229 (507)
.|..|+||||+|+. |+.++++.|++.++++ +.+|..|+||||+|+..++ +.+|.+|+||||+|+
T Consensus 34 ~~~~g~t~L~~A~~-~~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~ 111 (162)
T 1ihb_A 34 QNGFGRTALQVMKL-GNPEIARRLLLRGANP-DLKDRTGFAVIHDAARAGFLDTLQTLLEFQADVNIEDNEGNLPLHLAA 111 (162)
T ss_dssp CCTTSCCHHHHCCS-SCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHH
T ss_pred cCccCccHHHHHHc-CcHHHHHHHHHcCCCC-CCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHH
Confidence 36679999999999 9999999999999997 8899999999999999987 678999999999999
Q ss_pred hcCCHHHHHHHHhhCCchHHHHHHHhcccccccccccccCCCCcHHHHHHhcCCCcccc
Q 039657 230 RMGVTEMVEQILDTFPANQYLQALLNRKILGESIFRQVDSQGNSALHLAAKFGDHRPWL 288 (507)
Q Consensus 230 ~~g~~~iv~~Ll~~~~~~~vv~~Ll~~~~~~~~~in~~D~~GnTpLHlAa~~g~~~~v~ 288 (507)
.+|+.+++++|++++++ .++.+|..|+||||+|+..|+.++++
T Consensus 112 ~~~~~~~v~~Ll~~g~~----------------~~~~~~~~g~t~l~~A~~~~~~~~~~ 154 (162)
T 1ihb_A 112 KEGHLRVVEFLVKHTAS----------------NVGHRNHKGDTACDLARLYGRNEVVS 154 (162)
T ss_dssp HTTCHHHHHHHHHHSCC----------------CTTCCCTTSCCHHHHHHHTTCHHHHH
T ss_pred HcCCHHHHHHHHHccCC----------------CCCCcCCCCCcHHHHHHHcCCHHHHH
Confidence 99999977777776553 46899999999999999999988763
No 62
>2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A
Probab=99.81 E-value=6.8e-21 Score=184.70 Aligned_cols=144 Identities=16% Similarity=0.111 Sum_probs=104.8
Q ss_pred CCCCChHHHHHHHc---CCHHHHHHHhhhCCcccc----------cccCCCCcHHHHHHHcCC--------------ccc
Q 039657 165 TEKMDNKILLAAKI---GVTEMVDRFLKSYPAVIQ----------ELNTSEKNLVLLTFEKKN--------------AQQ 217 (507)
Q Consensus 165 d~~g~TpLh~Aa~~---G~~~~v~~Ll~~~~~~~~----------~~d~~G~tpLh~A~~~~~--------------~~~ 217 (507)
|..|+||||+||.. |+.++|+.|++.+++... ..|.+|+||||+|+..|+ +.+
T Consensus 40 d~~g~t~L~~A~~~~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~ 119 (256)
T 2etb_A 40 GSTGKTCLMKAVLNLQDGVNACIMPLLQIDKDSGNPKPLVNAQCTDEFYQGHSALHIAIEKRSLQCVKLLVENGADVHLR 119 (256)
T ss_dssp TTTTBCHHHHHHHTCBTTBCTTHHHHHHHHHHTTCSSCGGGCCCCSTTTTTCCHHHHHHHTTCHHHHHHHHHTTCCTTCC
T ss_pred CCCCCCHHHHHHHccccchHHHHHHHHhcCCcccchhhhcccccccccccCCCHHHHHHHcCCHHHHHHHHHcCCCCCcc
Confidence 66899999999999 999999999999876521 245789999999999988 556
Q ss_pred CCC-------------CCCccchhhhcCCHHHHHHHHhhCCchHHHHHHHhcccccccccccccCCCCcHHHHHHh--cC
Q 039657 218 SGR-------------KETPMLIAARMGVTEMVEQILDTFPANQYLQALLNRKILGESIFRQVDSQGNSALHLAAK--FG 282 (507)
Q Consensus 218 d~~-------------g~TpLH~Aa~~g~~~iv~~Ll~~~~~~~vv~~Ll~~~~~~~~~in~~D~~GnTpLHlAa~--~g 282 (507)
|.. |+||||+|+.+|+.++|++|++... .+ +.+|.+|.+|+||||+|+. .+
T Consensus 120 ~~~~~~~~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~~~----------~g----a~~n~~d~~g~TpLh~A~~~~~~ 185 (256)
T 2etb_A 120 ACGRFFQKHQGTCFYFGELPLSLAACTKQWDVVTYLLENPH----------QP----ASLEATDSLGNTVLHALVMIADN 185 (256)
T ss_dssp CCSGGGSCCSSSCCCSCSSHHHHHHHTTCHHHHHHHHHCSS----------CC----CCTTCCCTTSCCHHHHHHHHCCS
T ss_pred cccccccccccccccCCCCHHHHHHHcCCHHHHHHHHhccc----------cC----CCcCccCCCCCCHHHHHHHcccC
Confidence 655 9999999999999996666665210 23 5689999999999999999 45
Q ss_pred CCc-------ccccCchhhhhHHHHHHhhhhhccCCccccccccCCCCCccccccccc
Q 039657 283 DHR-------PWLLPGAALQMQWEIKWYQFVKKSMPRHFFTRFNDNGKTPKEVFTETH 333 (507)
Q Consensus 283 ~~~-------~v~~~gaal~~~~el~w~~~v~~~~~~~~~~~~N~~G~Tpldl~~~~~ 333 (507)
+.+ ++++ .+.... .+. ......+.+|++|+||++++....
T Consensus 186 ~~~~~~~~~~iv~~-----Ll~~ga----~~~--~~~~~~~~~d~~g~tpL~~A~~~g 232 (256)
T 2etb_A 186 SPENSALVIHMYDG-----LLQMGA----RLC--PTVQLEEISNHQGLTPLKLAAKEG 232 (256)
T ss_dssp CHHHHHHHHHHHHH-----HHHHHH----HHS--TTCCGGGCCCTTSCCHHHHHHHTT
T ss_pred CchhhHHHHHHHHH-----HHHcCC----Ccc--cccccccccCCCCCCHHHHHHHhC
Confidence 544 3211 000000 000 000011789999999999987653
No 63
>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A
Probab=99.81 E-value=2.2e-20 Score=169.91 Aligned_cols=131 Identities=15% Similarity=0.108 Sum_probs=110.6
Q ss_pred CChHHHHHHHcCCHHHHHHHhhhCCcccccccCCCCcHHHHHHHcCC--------------cccCCCCCCccchhhhcCC
Q 039657 168 MDNKILLAAKIGVTEMVDRFLKSYPAVIQELNTSEKNLVLLTFEKKN--------------AQQSGRKETPMLIAARMGV 233 (507)
Q Consensus 168 g~TpLh~Aa~~G~~~~v~~Ll~~~~~~~~~~d~~G~tpLh~A~~~~~--------------~~~d~~g~TpLH~Aa~~g~ 233 (507)
+.||||.||..|+.++++.|++.+++.++.+|..|+||||+|+..++ +.+|.+|+||||+|+.+|+
T Consensus 2 ~~~~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~ 81 (172)
T 3v30_A 2 DSLSIHQLAAQGELDQLKEHLRKGDNLVNKPDERGFTPLIWASAFGEIETVRFLLEWGADPHILAKERESALSLASTGGY 81 (172)
T ss_dssp --CCHHHHHHTTCHHHHHHHHTTCSGGGGCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTCCCHHHHHHHTTC
T ss_pred chhhHHHHHHcCCHHHHHHHHHcCcccccCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCchhhcccCCCHHHHHHHCCC
Confidence 57899999999999999999999999779999999999999999988 6789999999999999999
Q ss_pred HHHHHHHHhhCCchHHHHHHHhcccccccccccccCCCCcHHHHHHhcCCCcccccCchhhhhHHHHHHhhhhhccCCcc
Q 039657 234 TEMVEQILDTFPANQYLQALLNRKILGESIFRQVDSQGNSALHLAAKFGDHRPWLLPGAALQMQWEIKWYQFVKKSMPRH 313 (507)
Q Consensus 234 ~~iv~~Ll~~~~~~~vv~~Ll~~~~~~~~~in~~D~~GnTpLHlAa~~g~~~~v~~~gaal~~~~el~w~~~v~~~~~~~ 313 (507)
.+++++|++++ ..++.+|..|+||||+|+..|+.++++. .++ .+.
T Consensus 82 ~~~v~~Ll~~g-----------------~~~~~~~~~g~t~L~~A~~~~~~~~v~~---------------Ll~---~ga 126 (172)
T 3v30_A 82 TDIVGLLLERD-----------------VDINIYDWNGGTPLLYAVRGNHVKCVEA---------------LLA---RGA 126 (172)
T ss_dssp HHHHHHHHTTT-----------------CCTTCCCTTSCCHHHHHHHTTCHHHHHH---------------HHH---TTC
T ss_pred HHHHHHHHHcC-----------------CCCCCCCCCCCCHHHHHHHcCCHHHHHH---------------HHH---cCC
Confidence 99666666553 4578999999999999999999877531 111 134
Q ss_pred ccccccCCCCCccccccccc
Q 039657 314 FFTRFNDNGKTPKEVFTETH 333 (507)
Q Consensus 314 ~~~~~N~~G~Tpldl~~~~~ 333 (507)
+.+.+|.+|+||++++....
T Consensus 127 ~~~~~~~~g~t~l~~A~~~~ 146 (172)
T 3v30_A 127 DLTTEADSGYTPMDLAVALG 146 (172)
T ss_dssp CTTCCCTTSCCHHHHHHHHT
T ss_pred CccccCCCCCCHHHHHHHhC
Confidence 56789999999999987653
No 64
>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1
Probab=99.81 E-value=1.3e-20 Score=165.17 Aligned_cols=110 Identities=17% Similarity=0.121 Sum_probs=97.7
Q ss_pred CcccCCCCCChHHHHHHHcCCHHHHHHHhhhCCcccccccCCCCcHHHHHHHcCC--------------cccCCC-CCCc
Q 039657 160 SAQSGTEKMDNKILLAAKIGVTEMVDRFLKSYPAVIQELNTSEKNLVLLTFEKKN--------------AQQSGR-KETP 224 (507)
Q Consensus 160 ~~~~~d~~g~TpLh~Aa~~G~~~~v~~Ll~~~~~~~~~~d~~G~tpLh~A~~~~~--------------~~~d~~-g~Tp 224 (507)
+++.+|..|.||||+|+..|+.++++.|++.++++ +.+|..|+||||+|+. ++ +.+|.. |+||
T Consensus 4 ~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~-~~~~~v~~Ll~~g~~~~~~~~~~g~t~ 81 (136)
T 1d9s_A 4 GIHMLGGSSDAGLATAAARGQVETVRQLLEAGADP-NALNRFGRRPIQVMMM-GSAQVAELLLLHGAEPNCADPATLTRP 81 (136)
T ss_dssp CCSCCCCCCSCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTCCTTTTTSTT-SCHHHHHHHHHHTCCSSCCBTTTTBCH
T ss_pred CccCCCCCCccHHHHHHHcCCHHHHHHHHHcCCCc-CCcCCCCCCHHHHHHc-CCHHHHHHHHHCCCCCCCcCCCCCCCH
Confidence 44677889999999999999999999999999987 8899999999999999 87 678888 9999
Q ss_pred cchhhhcCCHHHHHHHHhhCCchHHHHHHHhcccccccccccccCCCCcHHHHHHhcCCCcccc
Q 039657 225 MLIAARMGVTEMVEQILDTFPANQYLQALLNRKILGESIFRQVDSQGNSALHLAAKFGDHRPWL 288 (507)
Q Consensus 225 LH~Aa~~g~~~iv~~Ll~~~~~~~vv~~Ll~~~~~~~~~in~~D~~GnTpLHlAa~~g~~~~v~ 288 (507)
||+|+.+|+.+++++|++++ +.++.+|..|+||||+|+..|+.++++
T Consensus 82 L~~A~~~~~~~~v~~Ll~~g-----------------a~~~~~d~~g~tpl~~A~~~~~~~~~~ 128 (136)
T 1d9s_A 82 VHDAAREGFLDTLVVLHRAG-----------------ARLDVCDAWGRLPVDLAEEQGHRDIAR 128 (136)
T ss_dssp HHHHHHHTCHHHHHHHHHTC-----------------CCCCCCSSSSSCHHHHHHHHTCHHHHH
T ss_pred HHHHHHcCCHHHHHHHHHcC-----------------CCCCccCCCCCCHHHHHHHcCCHHHHH
Confidence 99999999999666666554 457899999999999999999977653
No 65
>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A
Probab=99.81 E-value=3.6e-20 Score=170.01 Aligned_cols=133 Identities=17% Similarity=0.220 Sum_probs=109.8
Q ss_pred CCCChHHHHHHHcCCHHHHHHHhhhCCcccccccCCCCcHHHHHHHcCC--------------cccCCCCCCccchhhhc
Q 039657 166 EKMDNKILLAAKIGVTEMVDRFLKSYPAVIQELNTSEKNLVLLTFEKKN--------------AQQSGRKETPMLIAARM 231 (507)
Q Consensus 166 ~~g~TpLh~Aa~~G~~~~v~~Ll~~~~~~~~~~d~~G~tpLh~A~~~~~--------------~~~d~~g~TpLH~Aa~~ 231 (507)
..+.+|||.||..|+.++|+.|++.++..++..|..|+||||+|+..++ +.+|.+|+||||+|+..
T Consensus 3 ~~~~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~ 82 (179)
T 3f6q_A 3 PEFMDDIFTQCREGNAVAVRLWLDNTENDLNQGDDHGFSPLHWACREGRSAVVEMLIMRGARINVMNRGDDTPLHLAASH 82 (179)
T ss_dssp ----CCHHHHHHHTCHHHHHHHHHCTTSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHT
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHhcCcccccccCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHc
Confidence 3578999999999999999999999776668999999999999999987 67899999999999999
Q ss_pred CCHHHHHHHHhhCCchHHHHHHHhcccccccccccccCCCCcHHHHHHhcCCCcccccCchhhhhHHHHHHhhhhhccCC
Q 039657 232 GVTEMVEQILDTFPANQYLQALLNRKILGESIFRQVDSQGNSALHLAAKFGDHRPWLLPGAALQMQWEIKWYQFVKKSMP 311 (507)
Q Consensus 232 g~~~iv~~Ll~~~~~~~vv~~Ll~~~~~~~~~in~~D~~GnTpLHlAa~~g~~~~v~~~gaal~~~~el~w~~~v~~~~~ 311 (507)
|+.++|++|++++ ..+|.+|..|+||||+|+..|+.+++++ .++ .
T Consensus 83 ~~~~~v~~Ll~~g-----------------~~~~~~d~~g~t~L~~A~~~~~~~~v~~---------------Ll~---~ 127 (179)
T 3f6q_A 83 GHRDIVQKLLQYK-----------------ADINAVNEHGNVPLHYACFWGQDQVAED---------------LVA---N 127 (179)
T ss_dssp TCHHHHHHHHHTT-----------------CCTTCCCTTSCCHHHHHHHTTCHHHHHH---------------HHH---T
T ss_pred CCHHHHHHHHHcC-----------------CCCCccCCCCCCHHHHHHHcCCHHHHHH---------------HHH---C
Confidence 9999666666553 4578999999999999999999776531 011 2
Q ss_pred ccccccccCCCCCccccccccc
Q 039657 312 RHFFTRFNDNGKTPKEVFTETH 333 (507)
Q Consensus 312 ~~~~~~~N~~G~Tpldl~~~~~ 333 (507)
..+.+.+|.+|+||++++....
T Consensus 128 ga~~~~~~~~g~tpl~~A~~~~ 149 (179)
T 3f6q_A 128 GALVSICNKYGEMPVDKAKAPL 149 (179)
T ss_dssp TCCSSBCCTTSCCGGGGSCHHH
T ss_pred CCCcchhccCCCCcHHHHHHHH
Confidence 3456789999999999987653
No 66
>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B
Probab=99.81 E-value=4.8e-20 Score=177.67 Aligned_cols=139 Identities=9% Similarity=-0.023 Sum_probs=94.1
Q ss_pred CChHHHHHHHcCCHHHHHHHhhhCCcccccccCCCCcHHHHHHHcCC--------------cccCCCCCCccchhhhcCC
Q 039657 168 MDNKILLAAKIGVTEMVDRFLKSYPAVIQELNTSEKNLVLLTFEKKN--------------AQQSGRKETPMLIAARMGV 233 (507)
Q Consensus 168 g~TpLh~Aa~~G~~~~v~~Ll~~~~~~~~~~d~~G~tpLh~A~~~~~--------------~~~d~~g~TpLH~Aa~~g~ 233 (507)
|.||||.||..|+.++|+.|++.++++ +.+|.+|+||||+||..|+ +.+|.+|+||||+|+.+|+
T Consensus 37 ~~t~L~~A~~~g~~~~v~~Ll~~g~~~-~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~tpL~~A~~~~~ 115 (239)
T 1ycs_B 37 PLALLLDSSLEGEFDLVQRIIYEVDDP-SLPNDEGITALHNAVCAGHTEIVKFLVQFGVNVNAADSDGWTPLHCAASCNN 115 (239)
T ss_dssp CHHHHHHHHHHTCHHHHHHHTSTTSSC-CCCCTTSCCHHHHHHHHTCHHHHHHHHHHTCCTTCCCTTCCCHHHHHHHTTC
T ss_pred hhHHHHHHHHcCCHHHHHHHHHcCCCC-CCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCC
Confidence 566777777777777777777766665 6666777777777776665 6677888888888999999
Q ss_pred HHHHHHHHhhCCchHHHHHHHhcccccccccccccCCCC-cHHHHH--HhcCCCcccccCchhhhhHHHHHHhhhhhccC
Q 039657 234 TEMVEQILDTFPANQYLQALLNRKILGESIFRQVDSQGN-SALHLA--AKFGDHRPWLLPGAALQMQWEIKWYQFVKKSM 310 (507)
Q Consensus 234 ~~iv~~Ll~~~~~~~vv~~Ll~~~~~~~~~in~~D~~Gn-TpLHlA--a~~g~~~~v~~~gaal~~~~el~w~~~v~~~~ 310 (507)
.++|++|+++++ .++.+|..|. ||||+| +..|+.+++++. +.... .+....
T Consensus 116 ~~~v~~Ll~~ga-----------------~~~~~~~~~~~t~l~~a~~~~~g~~~~~~~L-----l~~~a----~~~~~~ 169 (239)
T 1ycs_B 116 VQVCKFLVESGA-----------------AVFAMTYSDMQTAADKCEEMEEGYTQCSQFL-----YGVQE----KMGIMN 169 (239)
T ss_dssp HHHHHHHHHTTC-----------------CTTCCCSSSCCCHHHHCCSSSTTCCCHHHHH-----HHHHH----HTTTTG
T ss_pred HHHHHHHHHcCC-----------------CcceecCCCCcchHHHHHHhhhccHHHHHHH-----HHhhh----cccccc
Confidence 996666666544 5788888877 999999 778888876421 11100 011001
Q ss_pred CccccccccCCCCCccccccccc
Q 039657 311 PRHFFTRFNDNGKTPKEVFTETH 333 (507)
Q Consensus 311 ~~~~~~~~N~~G~Tpldl~~~~~ 333 (507)
........+..+++|.+++....
T Consensus 170 ~~~~~al~d~~~~~~~eLa~~~G 192 (239)
T 1ycs_B 170 KGVIYALWDYEPQNDDELPMKEG 192 (239)
T ss_dssp GGEEEESSCBCCSSTTBCCBCSS
T ss_pred cceEEEEeccCCCCCCcccccCC
Confidence 11223456788999998876654
No 67
>3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A 4dx1_A 4dx2_A*
Probab=99.81 E-value=1.3e-20 Score=182.89 Aligned_cols=150 Identities=15% Similarity=0.168 Sum_probs=105.0
Q ss_pred CCCCChHHHHHH---HcCCHHHHHHHhhhCCcc----------cccccCCCCcHHHHHHHcCC--------------ccc
Q 039657 165 TEKMDNKILLAA---KIGVTEMVDRFLKSYPAV----------IQELNTSEKNLVLLTFEKKN--------------AQQ 217 (507)
Q Consensus 165 d~~g~TpLh~Aa---~~G~~~~v~~Ll~~~~~~----------~~~~d~~G~tpLh~A~~~~~--------------~~~ 217 (507)
|..|+||||+|+ +.|+.++|+.|++.+++. ....|.+|+||||+|+..|+ +.+
T Consensus 43 ~~~g~t~L~~A~~~~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~ 122 (260)
T 3jxi_A 43 PSTGKTCLPKALLNLSAGRNDTIPILLDIAEKTGNMREFINSPFRDVYYRGQTALHIAIERRCKHYVELLVEKGADVHAQ 122 (260)
T ss_dssp TTTCCCHHHHHHTSCBTTBCTHHHHHHHHHHHTTCHHHHHTCCBCCSSEESBCHHHHHHHTTCHHHHHHHHHTTCCTTCC
T ss_pred cCCCCcHHHHHHHHhhcCCHHHHHHHHHhcccccchHhhhcccccccccCCCCHHHHHHHcCCHHHHHHHHhCCCCcCcc
Confidence 567999999999 789999999999987432 24556699999999999998 555
Q ss_pred C--------------CCCCCccchhhhcCCHHHHHHHHhhCCchHHHHHHHhcccccccccccccCCCCcHHHHHHhcCC
Q 039657 218 S--------------GRKETPMLIAARMGVTEMVEQILDTFPANQYLQALLNRKILGESIFRQVDSQGNSALHLAAKFGD 283 (507)
Q Consensus 218 d--------------~~g~TpLH~Aa~~g~~~iv~~Ll~~~~~~~vv~~Ll~~~~~~~~~in~~D~~GnTpLHlAa~~g~ 283 (507)
| .+|+||||+|+.+|+.++|++|++.+. .+ +.+|.+|..|+||||+|++.|+
T Consensus 123 ~~~~~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~----------~g----a~~~~~d~~g~TpLh~A~~~~~ 188 (260)
T 3jxi_A 123 ARGRFFQPKDEGGYFYFGELPLSLAACTNQPHIVHYLTENGH----------KQ----ADLRRQDSRGNTVLHALVAIAD 188 (260)
T ss_dssp CEECCCSSSCCCCSCCSCSSHHHHHHHTTCHHHHHHHHHCSS----------CC----CCTTCCCTTSCCHHHHHHHHCC
T ss_pred ccccccCcccccccccCCCCHHHHHHHcCCHHHHHHHHhccc----------cC----CCCcccCCCCCcHHHHHHHhcc
Confidence 5 589999999999999996666666210 22 5689999999999999999887
Q ss_pred CcccccCchhhhh-HHHHHHhhh--hhccCCccccccccCCCCCccccccccc
Q 039657 284 HRPWLLPGAALQM-QWEIKWYQF--VKKSMPRHFFTRFNDNGKTPKEVFTETH 333 (507)
Q Consensus 284 ~~~v~~~gaal~~-~~el~w~~~--v~~~~~~~~~~~~N~~G~Tpldl~~~~~ 333 (507)
...-. ... ..-++++-. ..-.......+.+|++|+||++++....
T Consensus 189 ~~~~~-----~~~~~~~v~~Ll~~ga~~~~~~~~~~~~d~~g~tpL~~A~~~g 236 (260)
T 3jxi_A 189 NTREN-----TKFVTKMYDLLLIKCAKLFPDTNLEALLNNDGLSPLMMAAKTG 236 (260)
T ss_dssp SSHHH-----HHHHHHHHHHHHHHHHHHCTTCCGGGCCCTTSCCHHHHHHHTT
T ss_pred CchhH-----HHHHHHHHHHHHHhCcccccccchhhcccCCCCCHHHHHHHcC
Confidence 32100 000 000000000 0000001122679999999999987653
No 68
>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A
Probab=99.81 E-value=1.2e-20 Score=169.47 Aligned_cols=128 Identities=17% Similarity=0.098 Sum_probs=93.9
Q ss_pred cCCCCCChHHHHHHHcCCHHHHHHHhhhCCcccccccCCCCcHHHHHHHcCC--------------cccCCCCCC-ccch
Q 039657 163 SGTEKMDNKILLAAKIGVTEMVDRFLKSYPAVIQELNTSEKNLVLLTFEKKN--------------AQQSGRKET-PMLI 227 (507)
Q Consensus 163 ~~d~~g~TpLh~Aa~~G~~~~v~~Ll~~~~~~~~~~d~~G~tpLh~A~~~~~--------------~~~d~~g~T-pLH~ 227 (507)
..++.|.||||+||..|+.++|+.|++.++++ +.+|..|+||||+|+ .++ +.+|..|+| |||+
T Consensus 7 ~~~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~-~~~~~~v~~Ll~~g~~~~~~d~~g~ttpL~~ 84 (156)
T 1bi7_B 7 SSMEPSADWLATAAARGRVEEVRALLEAGANP-NAPNSYGRRPIQVMM-MGSARVAELLLLHGAEPNCADPATLTRPVHD 84 (156)
T ss_dssp ---CCSTTHHHHHHHHTCHHHHHHHHTTTCCT-TCCCSSSCCTTTSSC-TTCHHHHHHHHTTTCCCCCCCTTTCCCHHHH
T ss_pred CCCccchHHHHHHHHcCCHHHHHHHHHcCCCC-CCCCCCCCCHHHHHH-cCCHHHHHHHHHcCCCCCCcCCCCCcHHHHH
Confidence 44678999999999999999999999999987 889999999999985 555 678999999 9999
Q ss_pred hhhcCCHHHHHHHHhhCCchHHHHHHHhcccccccccccccCCCCcHHHHHHhcCCCcccccCchhhhhHHHHHHhhhhh
Q 039657 228 AARMGVTEMVEQILDTFPANQYLQALLNRKILGESIFRQVDSQGNSALHLAAKFGDHRPWLLPGAALQMQWEIKWYQFVK 307 (507)
Q Consensus 228 Aa~~g~~~iv~~Ll~~~~~~~vv~~Ll~~~~~~~~~in~~D~~GnTpLHlAa~~g~~~~v~~~gaal~~~~el~w~~~v~ 307 (507)
|+.+|+.++|++|++++ +.++.+|..|+||||+|+..|+.+++++ +
T Consensus 85 A~~~~~~~~v~~Ll~~g-----------------a~~~~~d~~g~tpl~~A~~~~~~~~v~~----------------L- 130 (156)
T 1bi7_B 85 AAREGFLDTLVVLHRAG-----------------ARLDVRDAWGRLPVDLAEELGHRDVARY----------------L- 130 (156)
T ss_dssp HHHHTCHHHHHHHHHHT-----------------CCSSCCCTTCCCHHHHHHHHTCHHHHHH----------------H-
T ss_pred HHHCCCHHHHHHHHHcC-----------------CCCcccCCCCCCHHHHHHHhCHHHHHHH----------------H-
Confidence 99999999666666653 4579999999999999999999876531 1
Q ss_pred ccCCccccccccCCCCCccc
Q 039657 308 KSMPRHFFTRFNDNGKTPKE 327 (507)
Q Consensus 308 ~~~~~~~~~~~N~~G~Tpld 327 (507)
.....+.+.+|..|.||.+
T Consensus 131 -l~~ga~~~~~~~~g~t~~~ 149 (156)
T 1bi7_B 131 -RAAAGGTRGSNHARIDAAE 149 (156)
T ss_dssp -SSCC---------------
T ss_pred -HHcCCCCCccCcCcCcccc
Confidence 1124456788889998875
No 69
>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1
Probab=99.80 E-value=8.8e-20 Score=180.47 Aligned_cols=148 Identities=15% Similarity=0.079 Sum_probs=118.0
Q ss_pred CCCCCChHHHHHHHcCCHHHHHHHhhhCCcccccccCCCCcHHHHHHHcCC--------------cccCCCCCCccchhh
Q 039657 164 GTEKMDNKILLAAKIGVTEMVDRFLKSYPAVIQELNTSEKNLVLLTFEKKN--------------AQQSGRKETPMLIAA 229 (507)
Q Consensus 164 ~d~~g~TpLh~Aa~~G~~~~v~~Ll~~~~~~~~~~d~~G~tpLh~A~~~~~--------------~~~d~~g~TpLH~Aa 229 (507)
.|..|.||||+||..|+.++|+.|++.++++ +.+|.+|+||||+|+..|+ +.+|.+|.||||+|+
T Consensus 69 ~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~-~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~ 147 (299)
T 1s70_B 69 ANVDGLTALHQACIDDNVDMVKFLVENGANI-NQPDNEGWIPLHAAASCGYLDIAEYLISQGAHVGAVNSEGDTPLDIAE 147 (299)
T ss_dssp BCTTCCBHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHCC
T ss_pred cCCCCCCHHHHHHHcCCHHHHHHHHHCCCCC-CCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCCcCCCCCCHHHHHH
Confidence 3567999999999999999999999999997 8899999999999999987 678999999999999
Q ss_pred hcCCHHHHHHHHhhCCc--hH-----------HHHHHHhcccccccccccccCCCCcHHHHHHhcCCCcccccCchhhhh
Q 039657 230 RMGVTEMVEQILDTFPA--NQ-----------YLQALLNRKILGESIFRQVDSQGNSALHLAAKFGDHRPWLLPGAALQM 296 (507)
Q Consensus 230 ~~g~~~iv~~Ll~~~~~--~~-----------vv~~Ll~~~~~~~~~in~~D~~GnTpLHlAa~~g~~~~v~~~gaal~~ 296 (507)
..|+.++++.++..... +. .+..++..+. ......|..|.||||+|+..|+.+++++
T Consensus 148 ~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~---~~~~~~~~~g~t~L~~A~~~g~~~~v~~------- 217 (299)
T 1s70_B 148 EEAMEELLQNEVNRQGVDIEAARKEEERIMLRDARQWLNSGH---INDVRHAKSGGTALHVAAAKGYTEVLKL------- 217 (299)
T ss_dssp SHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHTC---CCCCCCTTTCCCHHHHHHHHTCHHHHHH-------
T ss_pred hcchHHHHHHHHhhcCCCchhhhhhhhhHHHHHHHHHHhccC---cchhhhcCCCCCHHHHHHHCCcHHHHHH-------
Confidence 99999999998876443 10 1223333331 3345678899999999999999877531
Q ss_pred HHHHHHhhhhhccCCccccccccCCCCCccccccccc
Q 039657 297 QWEIKWYQFVKKSMPRHFFTRFNDNGKTPKEVFTETH 333 (507)
Q Consensus 297 ~~el~w~~~v~~~~~~~~~~~~N~~G~Tpldl~~~~~ 333 (507)
.++ .+.+++.+|.+|.||++++....
T Consensus 218 --------Ll~---~g~d~~~~d~~g~tpL~~A~~~~ 243 (299)
T 1s70_B 218 --------LIQ---ARYDVNIKDYDGWTPLHAAAHWG 243 (299)
T ss_dssp --------HHT---TTCCTTCCCTTCCCHHHHHHHTT
T ss_pred --------HHH---cCCCCCCcCCCCCcHHHHHHhcC
Confidence 011 23456789999999999986543
No 70
>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C*
Probab=99.80 E-value=4.2e-20 Score=168.08 Aligned_cols=133 Identities=23% Similarity=0.238 Sum_probs=111.3
Q ss_pred CCCCChHHHHHHHcCCHHHHHHHhhhCCcccccccCCCCcHHHHHHHcCC--------------cccCCCCCCccchhhh
Q 039657 165 TEKMDNKILLAAKIGVTEMVDRFLKSYPAVIQELNTSEKNLVLLTFEKKN--------------AQQSGRKETPMLIAAR 230 (507)
Q Consensus 165 d~~g~TpLh~Aa~~G~~~~v~~Ll~~~~~~~~~~d~~G~tpLh~A~~~~~--------------~~~d~~g~TpLH~Aa~ 230 (507)
...+.||||.||+.|+.++|+.|++.++++ +.+|.+|+||||+|+..++ +.+|.+|+||||+|+.
T Consensus 11 ~~~~~~~l~~A~~~g~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~ 89 (169)
T 2y1l_E 11 GSDLGKKLLEAARAGRDDEVRILMANGADV-NAEDASGWTPLHLAAFNGHLEIVEVLLKNGADVNAVDHAGMTPLRLAAL 89 (169)
T ss_dssp --CHHHHHHHHHHHTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHH
T ss_pred CCcccchHHHHHHcCCHHHHHHHHHCCCCC-CCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHH
Confidence 345789999999999999999999999997 8899999999999999987 6788999999999999
Q ss_pred cCCHHHHHHHHhhCCchHHHHHHHhcccccccccccccCCCCcHHHHHHhcCCCcccccCchhhhhHHHHHHhhhhhccC
Q 039657 231 MGVTEMVEQILDTFPANQYLQALLNRKILGESIFRQVDSQGNSALHLAAKFGDHRPWLLPGAALQMQWEIKWYQFVKKSM 310 (507)
Q Consensus 231 ~g~~~iv~~Ll~~~~~~~vv~~Ll~~~~~~~~~in~~D~~GnTpLHlAa~~g~~~~v~~~gaal~~~~el~w~~~v~~~~ 310 (507)
+|+.+++++|++++ ..++.+|.+|+||||+|+..|+.++++. + ++
T Consensus 90 ~~~~~~~~~Ll~~g-----------------~~~~~~~~~g~t~L~~A~~~~~~~~v~~-------------L--l~--- 134 (169)
T 2y1l_E 90 FGHLEIVEVLLKNG-----------------ADVNANDMEGHTPLHLAAMFGHLEIVEV-------------L--LK--- 134 (169)
T ss_dssp TTCHHHHHHHHHTT-----------------CCTTCCCTTSCCHHHHHHHTTCHHHHHH-------------H--HH---
T ss_pred cCCHHHHHHHHHcC-----------------CCCCCCCCCCCCHHHHHHHcCCHHHHHH-------------H--HH---
Confidence 99999666666553 4578999999999999999999876531 1 11
Q ss_pred CccccccccCCCCCccccccccc
Q 039657 311 PRHFFTRFNDNGKTPKEVFTETH 333 (507)
Q Consensus 311 ~~~~~~~~N~~G~Tpldl~~~~~ 333 (507)
...+.+.+|.+|+||++++....
T Consensus 135 ~g~~~~~~~~~g~t~l~~A~~~~ 157 (169)
T 2y1l_E 135 NGADVNAQDKFGKTAFDISIDNG 157 (169)
T ss_dssp TTCCTTCCCTTSCCHHHHHHHTT
T ss_pred cCCCCCCcCCCCCCHHHHHHHhC
Confidence 13356788999999999987653
No 71
>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1
Probab=99.80 E-value=4.4e-20 Score=164.94 Aligned_cols=129 Identities=19% Similarity=0.166 Sum_probs=108.1
Q ss_pred CChHHHHHHHcCCHHHHHHHhhhCCcccccccCCCCcHHHHHHHcCC--------------cccCCCCCCccchhhhcCC
Q 039657 168 MDNKILLAAKIGVTEMVDRFLKSYPAVIQELNTSEKNLVLLTFEKKN--------------AQQSGRKETPMLIAARMGV 233 (507)
Q Consensus 168 g~TpLh~Aa~~G~~~~v~~Ll~~~~~~~~~~d~~G~tpLh~A~~~~~--------------~~~d~~g~TpLH~Aa~~g~ 233 (507)
+.||||.|++.|+.++++.|++.+++. + .|..|+||||+|+..++ +.+|.+|+||||+|+.+|+
T Consensus 2 ~~~~L~~A~~~g~~~~v~~Ll~~g~~~-~-~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~ 79 (153)
T 1awc_B 2 LGKKLLEAARAGQDDEVRILMANGAPF-T-TDWLGTSPLHLAAQYGHFSTTEVLLRAGVSRDARTKVDRTPLHMAASEGH 79 (153)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHHTCCC-C-CCTTCCCHHHHHHHHTCHHHHHHHHTTTCCTTCCCTTCCCHHHHHHHHTC
T ss_pred ccHHHHHHHHcCCHHHHHHHHHcCCCC-C-cCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCh
Confidence 468999999999999999999999986 3 68999999999999987 6789999999999999999
Q ss_pred HHHHHHHHhhCCchHHHHHHHhcccccccccccccCCCCcHHHHHHhcCCCcccccCchhhhhHHHHHHhhhhhccCCcc
Q 039657 234 TEMVEQILDTFPANQYLQALLNRKILGESIFRQVDSQGNSALHLAAKFGDHRPWLLPGAALQMQWEIKWYQFVKKSMPRH 313 (507)
Q Consensus 234 ~~iv~~Ll~~~~~~~vv~~Ll~~~~~~~~~in~~D~~GnTpLHlAa~~g~~~~v~~~gaal~~~~el~w~~~v~~~~~~~ 313 (507)
.+++++|++++ ..++.+|..|+||||+|+..|+.++++. .++ .+.
T Consensus 80 ~~~v~~Ll~~g-----------------~~~~~~~~~g~t~L~~A~~~~~~~~v~~---------------Ll~---~ga 124 (153)
T 1awc_B 80 ANIVEVLLKHG-----------------ADVNAKDMLKMTALHWATEHNHQEVVEL---------------LIK---YGA 124 (153)
T ss_dssp HHHHHHHHTTT-----------------CCTTCCCTTSCCHHHHHHHTTCHHHHHH---------------HHH---TTC
T ss_pred HHHHHHHHHcC-----------------CCCCCCCCCCCCHHHHHHHcCCHHHHHH---------------HHH---cCC
Confidence 99666666553 4578999999999999999999877531 111 133
Q ss_pred ccccccCCCCCccccccccc
Q 039657 314 FFTRFNDNGKTPKEVFTETH 333 (507)
Q Consensus 314 ~~~~~N~~G~Tpldl~~~~~ 333 (507)
+.+.+|++|+||++++....
T Consensus 125 ~~~~~~~~g~t~l~~A~~~~ 144 (153)
T 1awc_B 125 DVHTQSKFCKTAFDISIDNG 144 (153)
T ss_dssp CTTCCCTTSCCHHHHHHHTT
T ss_pred CccccCCCCCCHHHHHHHcC
Confidence 56789999999999987653
No 72
>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A
Probab=99.80 E-value=3.5e-20 Score=166.58 Aligned_cols=131 Identities=23% Similarity=0.186 Sum_probs=108.4
Q ss_pred CCChHHHHHHHcCCHHHHHHHhhhCCcccccccCCCCcHHHHHHHcCC--------------cccCCCCCCccchhhhcC
Q 039657 167 KMDNKILLAAKIGVTEMVDRFLKSYPAVIQELNTSEKNLVLLTFEKKN--------------AQQSGRKETPMLIAARMG 232 (507)
Q Consensus 167 ~g~TpLh~Aa~~G~~~~v~~Ll~~~~~~~~~~d~~G~tpLh~A~~~~~--------------~~~d~~g~TpLH~Aa~~g 232 (507)
...||||.|+..|+.++++.|++.++++ +.+|..|+||||+|+. ++ +.+|..|+||||+|+.+|
T Consensus 4 ~~~~~L~~A~~~g~~~~v~~Ll~~~~~~-~~~~~~g~t~L~~A~~-~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~ 81 (162)
T 1ihb_A 4 PWGNELASAAARGDLEQLTSLLQNNVNV-NAQNGFGRTALQVMKL-GNPEIARRLLLRGANPDLKDRTGFAVIHDAARAG 81 (162)
T ss_dssp -CHHHHHHHHHHTCHHHHHHHTTSCCCT-TCCCTTSCCHHHHCCS-SCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHT
T ss_pred hHhhHHHHHHHcCCHHHHHHHHhCCCCc-cccCccCccHHHHHHc-CcHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcC
Confidence 4679999999999999999999999997 8899999999999988 66 678999999999999999
Q ss_pred CHHHHHHHHhhCCchHHHHHHHhcccccccccccccCCCCcHHHHHHhcCCCcccccCchhhhhHHHHHHhhhhhccCCc
Q 039657 233 VTEMVEQILDTFPANQYLQALLNRKILGESIFRQVDSQGNSALHLAAKFGDHRPWLLPGAALQMQWEIKWYQFVKKSMPR 312 (507)
Q Consensus 233 ~~~iv~~Ll~~~~~~~vv~~Ll~~~~~~~~~in~~D~~GnTpLHlAa~~g~~~~v~~~gaal~~~~el~w~~~v~~~~~~ 312 (507)
+.+++++|++++ ..+|.+|.+|+||||+|+..|+.++++. + ++. ..
T Consensus 82 ~~~~v~~Ll~~g-----------------~~~~~~~~~g~t~L~~A~~~~~~~~v~~-------------L--l~~--g~ 127 (162)
T 1ihb_A 82 FLDTLQTLLEFQ-----------------ADVNIEDNEGNLPLHLAAKEGHLRVVEF-------------L--VKH--TA 127 (162)
T ss_dssp CHHHHHHHHHTT-----------------CCTTCCCTTSCCHHHHHHHTTCHHHHHH-------------H--HHH--SC
T ss_pred CHHHHHHHHHcC-----------------CCCCCcCCCCCCHHHHHHHcCCHHHHHH-------------H--HHc--cC
Confidence 999666666553 4578999999999999999999877531 0 111 11
Q ss_pred cccccccCCCCCccccccccc
Q 039657 313 HFFTRFNDNGKTPKEVFTETH 333 (507)
Q Consensus 313 ~~~~~~N~~G~Tpldl~~~~~ 333 (507)
...+.+|.+|+||++++....
T Consensus 128 ~~~~~~~~~g~t~l~~A~~~~ 148 (162)
T 1ihb_A 128 SNVGHRNHKGDTACDLARLYG 148 (162)
T ss_dssp CCTTCCCTTSCCHHHHHHHTT
T ss_pred CCCCCcCCCCCcHHHHHHHcC
Confidence 124688999999999987653
No 73
>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B
Probab=99.80 E-value=1.5e-19 Score=161.50 Aligned_cols=106 Identities=18% Similarity=0.139 Sum_probs=95.2
Q ss_pred cCCCCCChHHHHHHHcCCHHHHHHHhhhCCcccccccCCCCcHHHHHHHcCC--------------cccCCCCCCccchh
Q 039657 163 SGTEKMDNKILLAAKIGVTEMVDRFLKSYPAVIQELNTSEKNLVLLTFEKKN--------------AQQSGRKETPMLIA 228 (507)
Q Consensus 163 ~~d~~g~TpLh~Aa~~G~~~~v~~Ll~~~~~~~~~~d~~G~tpLh~A~~~~~--------------~~~d~~g~TpLH~A 228 (507)
..|..|+||||+ |..|+.++++.|++.++++ +.+|.+|+||||+|+..++ +.+|.+|+||||+|
T Consensus 31 ~~~~~g~t~L~~-~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A 108 (156)
T 1bd8_A 31 ALNRFGKTALQV-MMFGSTAIALELLKQGASP-NVQDTSGTSPVHDAARTGFLDTLKVLVEHGADVNVPDGTGALPIHLA 108 (156)
T ss_dssp CCCTTSCCHHHH-SCTTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCSCCCCTTSCCHHHHH
T ss_pred ccCCCCCcHHHH-HHcCCHHHHHHHHHCCCCC-CCcCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCCCcCCCCCcHHHHH
Confidence 336679999999 9999999999999999997 8899999999999999988 67899999999999
Q ss_pred hhcCCHHHHHHHHhhCCchHHHHHHHhcccccccccccccCCCCcHHHHHHhcCCCcccc
Q 039657 229 ARMGVTEMVEQILDTFPANQYLQALLNRKILGESIFRQVDSQGNSALHLAAKFGDHRPWL 288 (507)
Q Consensus 229 a~~g~~~iv~~Ll~~~~~~~vv~~Ll~~~~~~~~~in~~D~~GnTpLHlAa~~g~~~~v~ 288 (507)
+.+|+.++|++|++. . .++.+|.+|+||||+|+..|+.++++
T Consensus 109 ~~~~~~~~v~~Ll~~-~-----------------~~~~~~~~g~t~l~~A~~~~~~~~v~ 150 (156)
T 1bd8_A 109 VQEGHTAVVSFLAAE-S-----------------DLHRRDARGLTPLELALQRGAQDLVD 150 (156)
T ss_dssp HHHTCHHHHHHHHTT-S-----------------CTTCCCTTSCCHHHHHHHSCCHHHHH
T ss_pred HHhChHHHHHHHHhc-c-----------------CCCCcCCCCCCHHHHHHHcCcHHHHH
Confidence 999999977777765 3 46889999999999999999987753
No 74
>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B
Probab=99.79 E-value=9.2e-20 Score=162.94 Aligned_cols=129 Identities=20% Similarity=0.195 Sum_probs=106.6
Q ss_pred CChHHHHHHHcCCHHHHHHHhhhCCcccccccCCCCcHHHHHHHcCC--------------cccCCCCCCccchhhhcCC
Q 039657 168 MDNKILLAAKIGVTEMVDRFLKSYPAVIQELNTSEKNLVLLTFEKKN--------------AQQSGRKETPMLIAARMGV 233 (507)
Q Consensus 168 g~TpLh~Aa~~G~~~~v~~Ll~~~~~~~~~~d~~G~tpLh~A~~~~~--------------~~~d~~g~TpLH~Aa~~g~ 233 (507)
|.||||.||..|+.++++.|++..+...+..|..|+||||+ +..++ +.+|.+|+||||+|+.+|+
T Consensus 2 ~~~~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~-~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~ 80 (156)
T 1bd8_A 2 AGDRLSGAAARGDVQEVRRLLHRELVHPDALNRFGKTALQV-MMFGSTAIALELLKQGASPNVQDTSGTSPVHDAARTGF 80 (156)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHTTCCCTTCCCTTSCCHHHH-SCTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTC
T ss_pred cchHHHHHHHhCCHHHHHHHHHhhCcCccccCCCCCcHHHH-HHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHcCc
Confidence 57999999999999999999999433348899999999999 77776 6789999999999999999
Q ss_pred HHHHHHHHhhCCchHHHHHHHhcccccccccccccCCCCcHHHHHHhcCCCcccccCchhhhhHHHHHHhhhhhccCCcc
Q 039657 234 TEMVEQILDTFPANQYLQALLNRKILGESIFRQVDSQGNSALHLAAKFGDHRPWLLPGAALQMQWEIKWYQFVKKSMPRH 313 (507)
Q Consensus 234 ~~iv~~Ll~~~~~~~vv~~Ll~~~~~~~~~in~~D~~GnTpLHlAa~~g~~~~v~~~gaal~~~~el~w~~~v~~~~~~~ 313 (507)
.+++++|++++ ..++.+|..|+||||+|+..|+.++++. +... .
T Consensus 81 ~~~v~~Ll~~g-----------------~~~~~~~~~g~t~L~~A~~~~~~~~v~~----------------Ll~~---~ 124 (156)
T 1bd8_A 81 LDTLKVLVEHG-----------------ADVNVPDGTGALPIHLAVQEGHTAVVSF----------------LAAE---S 124 (156)
T ss_dssp HHHHHHHHHTT-----------------CCSCCCCTTSCCHHHHHHHHTCHHHHHH----------------HHTT---S
T ss_pred HHHHHHHHHcC-----------------CCCCCcCCCCCcHHHHHHHhChHHHHHH----------------HHhc---c
Confidence 99666666553 4578999999999999999999776531 1111 4
Q ss_pred ccccccCCCCCccccccccc
Q 039657 314 FFTRFNDNGKTPKEVFTETH 333 (507)
Q Consensus 314 ~~~~~N~~G~Tpldl~~~~~ 333 (507)
+.+.+|.+|.||++++....
T Consensus 125 ~~~~~~~~g~t~l~~A~~~~ 144 (156)
T 1bd8_A 125 DLHRRDARGLTPLELALQRG 144 (156)
T ss_dssp CTTCCCTTSCCHHHHHHHSC
T ss_pred CCCCcCCCCCCHHHHHHHcC
Confidence 56789999999999987653
No 75
>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C
Probab=99.78 E-value=1.4e-19 Score=158.67 Aligned_cols=105 Identities=19% Similarity=0.205 Sum_probs=93.7
Q ss_pred CCCCChHHHHHHHcCCHHHHHHHhhhCCcccccccCCCCcHHHHHHHcCC--------------cccCCCCCCccchhhh
Q 039657 165 TEKMDNKILLAAKIGVTEMVDRFLKSYPAVIQELNTSEKNLVLLTFEKKN--------------AQQSGRKETPMLIAAR 230 (507)
Q Consensus 165 d~~g~TpLh~Aa~~G~~~~v~~Ll~~~~~~~~~~d~~G~tpLh~A~~~~~--------------~~~d~~g~TpLH~Aa~ 230 (507)
...|.||||+||..|+.++++.|++.++++ +.+|.+|+||||+|+..++ +.+|.+|+||||+|+.
T Consensus 11 ~~~~~t~l~~A~~~g~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~ 89 (136)
T 2jab_A 11 GSDLGKKLLEAARAGQDDEVRILMANGADV-NAKDEYGLTPLYLATAHGHLEIVEVLLKNGADVNAVDAIGFTPLHLAAF 89 (136)
T ss_dssp -CHHHHHHHHHHHHTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHH
T ss_pred cccccHHHHHHHHhCCHHHHHHHHHcCCCC-CCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCHHHHHHH
Confidence 446899999999999999999999999997 8899999999999999887 6789999999999999
Q ss_pred cCCHHHHHHHHhhCCchHHHHHHHhcccccccccccccCCCCcHHHHHHhcCCCccc
Q 039657 231 MGVTEMVEQILDTFPANQYLQALLNRKILGESIFRQVDSQGNSALHLAAKFGDHRPW 287 (507)
Q Consensus 231 ~g~~~iv~~Ll~~~~~~~vv~~Ll~~~~~~~~~in~~D~~GnTpLHlAa~~g~~~~v 287 (507)
.|+.++|++|++++ +.++.+|.+|+||||+|+..|+.+++
T Consensus 90 ~~~~~~v~~Ll~~g-----------------~~~~~~~~~g~tpl~~A~~~~~~~~~ 129 (136)
T 2jab_A 90 IGHLEIAEVLLKHG-----------------ADVNAQDKFGKTAFDISIGNGNEDLA 129 (136)
T ss_dssp HTCHHHHHHHHHTT-----------------CCTTCCCTTSCCHHHHHHHTTCHHHH
T ss_pred cCCHHHHHHHHHcC-----------------CCCcCcCCCCCCHHHHHHHCCCHHHH
Confidence 99999666666553 45789999999999999999997765
No 76
>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1
Probab=99.78 E-value=7.4e-20 Score=160.36 Aligned_cols=106 Identities=11% Similarity=0.078 Sum_probs=94.0
Q ss_pred CCCCCChHHHHHHHcCCHHHHHHHhhhCCcccccccCCCCcHHHHHHHcCC--------------cccCCCCCCccchhh
Q 039657 164 GTEKMDNKILLAAKIGVTEMVDRFLKSYPAVIQELNTSEKNLVLLTFEKKN--------------AQQSGRKETPMLIAA 229 (507)
Q Consensus 164 ~d~~g~TpLh~Aa~~G~~~~v~~Ll~~~~~~~~~~d~~G~tpLh~A~~~~~--------------~~~d~~g~TpLH~Aa 229 (507)
+|..|+||||+||..|+.++++.|++.++++ +.+|..|+||||+|+..++ +.+|..|+||||+|+
T Consensus 6 ~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~ 84 (137)
T 3c5r_A 6 TNHRGETLLHIASIKGDIPSVEYLLQNGSDP-NVKDHAGWTPLHEACNHGHLKVVELLLQHKALVNTTGYQNDSPLHDAA 84 (137)
T ss_dssp CCTTCCCHHHHHHHHTCHHHHHHHHHTTCCS-CCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCGGGCCHHHHHH
T ss_pred cCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC-CcCCCCCCCHHHHHHHcCCHHHHHHHHHcCCcccCcCCCCCCHHHHHH
Confidence 3778999999999999999999999999987 8899999999999999987 678999999999999
Q ss_pred hcCCHHHHHHHHhhCCchHHHHHHHhcccccccccccccCCCCcHHHHHHhcCCCccc
Q 039657 230 RMGVTEMVEQILDTFPANQYLQALLNRKILGESIFRQVDSQGNSALHLAAKFGDHRPW 287 (507)
Q Consensus 230 ~~g~~~iv~~Ll~~~~~~~vv~~Ll~~~~~~~~~in~~D~~GnTpLHlAa~~g~~~~v 287 (507)
.+|+.+++++|++++ +.++.+|..|+||||+|+..+..+++
T Consensus 85 ~~~~~~~v~~Ll~~g-----------------a~~~~~~~~g~tpl~~A~~~~~~~~l 125 (137)
T 3c5r_A 85 KNGHVDIVKLLLSYG-----------------ASRNAVNIFGLRPVDYTDDESMKSLL 125 (137)
T ss_dssp HTTCHHHHHHHHHTT-----------------CCTTCCCTTSCCGGGGCCCHHHHHHH
T ss_pred HcCCHHHHHHHHHcC-----------------CCCCCCCCCCCCHHHHHhhccHHHHH
Confidence 999999666666553 45789999999999999987765554
No 77
>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus}
Probab=99.78 E-value=9.3e-20 Score=180.56 Aligned_cols=110 Identities=11% Similarity=0.027 Sum_probs=88.7
Q ss_pred CCCcccCCCCCChHHHHHHHcCCHHHHHHHhhhCCcccccccCCCCcHHHHHHHcCC--------------cccCCCCCC
Q 039657 158 NGSAQSGTEKMDNKILLAAKIGVTEMVDRFLKSYPAVIQELNTSEKNLVLLTFEKKN--------------AQQSGRKET 223 (507)
Q Consensus 158 ~~~~~~~d~~g~TpLh~Aa~~G~~~~v~~Ll~~~~~~~~~~d~~G~tpLh~A~~~~~--------------~~~d~~g~T 223 (507)
....+.+|..|.||||+||..|+.++|+.|++.++++ +.. +|+||||+|+..|+ +.+|..|+|
T Consensus 21 ~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~-~~~--~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~t 97 (285)
T 3kea_A 21 SKDTFKADVHGHSASYYAIADNNVRLVCTLLNAGALK-NLL--ENEFPLHQAATLEDTKIVKILLFSGLDDSQFDDKGNT 97 (285)
T ss_dssp STTTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTGGG-SCC--TTCCHHHHHTTSSSCHHHHHHHHTTCCTTCCCTTSCC
T ss_pred hCCCCccCCCCCCHHHHHHHcCCHHHHHHHHhCCCCC-CCC--CCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCc
Confidence 3457888999999999999999999999999999887 555 59999999999887 678999999
Q ss_pred ccchhhhcCCHHHHHHHHhhCCchHHHHHHHhcccccccccccccCCC-CcHHHHHHhcCCCccc
Q 039657 224 PMLIAARMGVTEMVEQILDTFPANQYLQALLNRKILGESIFRQVDSQG-NSALHLAAKFGDHRPW 287 (507)
Q Consensus 224 pLH~Aa~~g~~~iv~~Ll~~~~~~~vv~~Ll~~~~~~~~~in~~D~~G-nTpLHlAa~~g~~~~v 287 (507)
|||+|+.+|+.++|++|++++++ ++.+|..| .||||+|+..|+.+++
T Consensus 98 ~L~~A~~~g~~~~v~~Ll~~ga~-----------------~~~~~~~g~~t~L~~A~~~~~~~~v 145 (285)
T 3kea_A 98 ALYYAVDSGNMQTVKLFVKKNWR-----------------LMFYGKTGWKTSFYHAVMLNDVSIV 145 (285)
T ss_dssp HHHHHHHTTCHHHHHHHHHHCGG-----------------GGGCSSSGGGSHHHHHHHTTCHHHH
T ss_pred HHHHHHHcCCHHHHHHHHhcCCC-----------------CCccCCCCCCCHHHHHHHcCCHHHH
Confidence 99999999999988888777544 45555555 4555555555554443
No 78
>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} SCOP: d.211.1.0 PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S*
Probab=99.77 E-value=3.5e-19 Score=160.80 Aligned_cols=104 Identities=18% Similarity=0.142 Sum_probs=92.5
Q ss_pred CCCCChHHHHHHHcCCHHHHHHHhhhCCcccccccCCCCcHHHHHHHcCC--------------cccCCCCCCccchhhh
Q 039657 165 TEKMDNKILLAAKIGVTEMVDRFLKSYPAVIQELNTSEKNLVLLTFEKKN--------------AQQSGRKETPMLIAAR 230 (507)
Q Consensus 165 d~~g~TpLh~Aa~~G~~~~v~~Ll~~~~~~~~~~d~~G~tpLh~A~~~~~--------------~~~d~~g~TpLH~Aa~ 230 (507)
+..|+||||+|+..|+.++++.|++.++++ +.+|.+|+||||+|+..++ +.+|..|+||||+|+.
T Consensus 39 ~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~ 117 (165)
T 3twr_A 39 EGRQSTPLHFAAGYNRVSVVEYLLQHGADV-HAKDKGGLVPLHNACSYGHYEVAELLVKHGAVVNVADLWKFTPLHEAAA 117 (165)
T ss_dssp TTTCCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHH
T ss_pred ccCCCCHHHHHHHcChHHHHHHHHhcCCCC-CccCCCCCCHHHHHHHcCcHHHHHHHHhCCCCCCCcCCCCCCHHHHHHH
Confidence 567999999999999999999999999997 8999999999999999987 6789999999999999
Q ss_pred cCCHHHHHHHHhhCCchHHHHHHHhcccccccccccccCCCCcHHHHHHhcCCCccc
Q 039657 231 MGVTEMVEQILDTFPANQYLQALLNRKILGESIFRQVDSQGNSALHLAAKFGDHRPW 287 (507)
Q Consensus 231 ~g~~~iv~~Ll~~~~~~~vv~~Ll~~~~~~~~~in~~D~~GnTpLHlAa~~g~~~~v 287 (507)
+|+.+++++|++++ +.++.+|.+|+||||+|+. |+.+++
T Consensus 118 ~~~~~~v~~Ll~~g-----------------a~~~~~~~~g~t~l~~a~~-~~~~i~ 156 (165)
T 3twr_A 118 KGKYEICKLLLQHG-----------------ADPTKKNRDGNTPLDLVKD-GDTDIQ 156 (165)
T ss_dssp TTCHHHHHHHHHTT-----------------CCTTCCCTTSCCTGGGSCT-TCHHHH
T ss_pred cCCHHHHHHHHHcC-----------------CCCcccCCCCCChhHhHhc-CChHHH
Confidence 99999666666553 4578999999999999876 776665
No 79
>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A
Probab=99.77 E-value=4.6e-19 Score=162.56 Aligned_cols=107 Identities=11% Similarity=0.151 Sum_probs=94.6
Q ss_pred cCCCCCChHHHHHHHcCCHHHHHHHhhhCCcccccccCCCCcHHHHHHHcCC--------------cccCCCCCCccchh
Q 039657 163 SGTEKMDNKILLAAKIGVTEMVDRFLKSYPAVIQELNTSEKNLVLLTFEKKN--------------AQQSGRKETPMLIA 228 (507)
Q Consensus 163 ~~d~~g~TpLh~Aa~~G~~~~v~~Ll~~~~~~~~~~d~~G~tpLh~A~~~~~--------------~~~d~~g~TpLH~A 228 (507)
..|..|+||||+||..|+.++++.|++.++++ +.+|.+|+||||+|+..++ +.+|.+|+||||+|
T Consensus 34 ~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A 112 (179)
T 3f6q_A 34 QGDDHGFSPLHWACREGRSAVVEMLIMRGARI-NVMNRGDDTPLHLAASHGHRDIVQKLLQYKADINAVNEHGNVPLHYA 112 (179)
T ss_dssp CCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHH
T ss_pred ccCCCCCCHHHHHHHcCcHHHHHHHHHcCCCC-CCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHH
Confidence 44678999999999999999999999999997 8899999999999999987 67899999999999
Q ss_pred hhcCCHHHHHHHHhhCCchHHHHHHHhcccccccccccccCCCCcHHHHHHhcCCCccc
Q 039657 229 ARMGVTEMVEQILDTFPANQYLQALLNRKILGESIFRQVDSQGNSALHLAAKFGDHRPW 287 (507)
Q Consensus 229 a~~g~~~iv~~Ll~~~~~~~vv~~Ll~~~~~~~~~in~~D~~GnTpLHlAa~~g~~~~v 287 (507)
+..|+.++|++|+++ + +.++.+|..|.||||+|+..++.+++
T Consensus 113 ~~~~~~~~v~~Ll~~-------------g----a~~~~~~~~g~tpl~~A~~~~~~~~~ 154 (179)
T 3f6q_A 113 CFWGQDQVAEDLVAN-------------G----ALVSICNKYGEMPVDKAKAPLRELLR 154 (179)
T ss_dssp HHTTCHHHHHHHHHT-------------T----CCSSBCCTTSCCGGGGSCHHHHHHHH
T ss_pred HHcCCHHHHHHHHHC-------------C----CCcchhccCCCCcHHHHHHHHHHHHH
Confidence 999999966666655 3 45789999999999999988775554
No 80
>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1
Probab=99.77 E-value=4.7e-19 Score=155.29 Aligned_cols=81 Identities=9% Similarity=-0.015 Sum_probs=69.7
Q ss_pred CCCCCChHHHHHHHcCCHHHHHHHhhhCCcccccccCC-CCcHHHHHHHcCC--------------cccCCCCCCccchh
Q 039657 164 GTEKMDNKILLAAKIGVTEMVDRFLKSYPAVIQELNTS-EKNLVLLTFEKKN--------------AQQSGRKETPMLIA 228 (507)
Q Consensus 164 ~d~~g~TpLh~Aa~~G~~~~v~~Ll~~~~~~~~~~d~~-G~tpLh~A~~~~~--------------~~~d~~g~TpLH~A 228 (507)
+|..|+||||+|+. |+.++++.|++.++++ +.+|.. |+||||+|+..++ +.+|.+|+||||+|
T Consensus 41 ~~~~g~t~L~~A~~-~~~~~v~~Ll~~g~~~-~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A 118 (136)
T 1d9s_A 41 LNRFGRRPIQVMMM-GSAQVAELLLLHGAEP-NCADPATLTRPVHDAAREGFLDTLVVLHRAGARLDVCDAWGRLPVDLA 118 (136)
T ss_dssp CCTTCCTTTTTSTT-SCHHHHHHHHHHTCCS-SCCBTTTTBCHHHHHHHHTCHHHHHHHHHTCCCCCCCSSSSSCHHHHH
T ss_pred cCCCCCCHHHHHHc-CCHHHHHHHHHCCCCC-CCcCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHH
Confidence 35678899999999 9999999999988886 788888 8999999988877 67888999999999
Q ss_pred hhcCCHHHHHHHHhhCCc
Q 039657 229 ARMGVTEMVEQILDTFPA 246 (507)
Q Consensus 229 a~~g~~~iv~~Ll~~~~~ 246 (507)
+.+|+.+++++|+++++|
T Consensus 119 ~~~~~~~~~~~Ll~~Gad 136 (136)
T 1d9s_A 119 EEQGHRDIARYLHAATGD 136 (136)
T ss_dssp HHHTCHHHHHHHHHHHCC
T ss_pred HHcCCHHHHHHHHHcCCC
Confidence 999999999888887653
No 81
>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1
Probab=99.77 E-value=9.1e-19 Score=149.76 Aligned_cols=104 Identities=25% Similarity=0.305 Sum_probs=93.0
Q ss_pred CCChHHHHHHHcCCHHHHHHHhhhCCcccccccCCCCcHHHHHHHcCC--------------cccCCCCCCccchhhhcC
Q 039657 167 KMDNKILLAAKIGVTEMVDRFLKSYPAVIQELNTSEKNLVLLTFEKKN--------------AQQSGRKETPMLIAARMG 232 (507)
Q Consensus 167 ~g~TpLh~Aa~~G~~~~v~~Ll~~~~~~~~~~d~~G~tpLh~A~~~~~--------------~~~d~~g~TpLH~Aa~~g 232 (507)
+|+||||+|+..|+.++++.|++.++++ +..|..|+||||+|+..++ +.+|..|+||||+|+..|
T Consensus 1 ~g~t~L~~A~~~~~~~~v~~Ll~~~~~~-~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~l~~A~~~~ 79 (126)
T 1n0r_A 1 NGRTPLHLAARNGHLEVVKLLLEAGADV-NAKDKNGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNG 79 (126)
T ss_dssp CCCCHHHHHHHHTCHHHHHHHHHHTCCT-TCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTT
T ss_pred CCccHHHHHHHcCcHHHHHHHHHcCCCC-CCcCCCCCcHHHHHHHcCcHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcC
Confidence 4899999999999999999999999987 8899999999999999887 678899999999999999
Q ss_pred CHHHHHHHHhhCCchHHHHHHHhcccccccccccccCCCCcHHHHHHhcCCCcccc
Q 039657 233 VTEMVEQILDTFPANQYLQALLNRKILGESIFRQVDSQGNSALHLAAKFGDHRPWL 288 (507)
Q Consensus 233 ~~~iv~~Ll~~~~~~~vv~~Ll~~~~~~~~~in~~D~~GnTpLHlAa~~g~~~~v~ 288 (507)
+.+++++|++.+ ..++.+|..|+||||+|+..|+.++++
T Consensus 80 ~~~~~~~Ll~~g-----------------~~~~~~~~~g~t~l~~A~~~~~~~~~~ 118 (126)
T 1n0r_A 80 HLEVVKLLLEAG-----------------ADVNAKDKNGRTPLHLAARNGHLEVVK 118 (126)
T ss_dssp CHHHHHHHHHTT-----------------CCTTCCCTTSCCHHHHHHHTTCHHHHH
T ss_pred hHHHHHHHHHcC-----------------CCCcccCCCCCCHHHHHHHcCcHHHHH
Confidence 999666666553 457899999999999999999977753
No 82
>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A
Probab=99.77 E-value=2.2e-19 Score=154.46 Aligned_cols=100 Identities=15% Similarity=0.119 Sum_probs=87.0
Q ss_pred CCCCChHHHHHHHcCCHHHHHHHhhhCCcccccccCCCCcHHHHHHHcCC--------------cccCCCCCCccchhhh
Q 039657 165 TEKMDNKILLAAKIGVTEMVDRFLKSYPAVIQELNTSEKNLVLLTFEKKN--------------AQQSGRKETPMLIAAR 230 (507)
Q Consensus 165 d~~g~TpLh~Aa~~G~~~~v~~Ll~~~~~~~~~~d~~G~tpLh~A~~~~~--------------~~~d~~g~TpLH~Aa~ 230 (507)
+..|.||||+|+..|+.++++.|++.++++ +.+|..|+||||+|+..++ +.+|.+|+||||+|+.
T Consensus 4 ~~~~~~~l~~A~~~~~~~~v~~ll~~~~~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~tpL~~A~~ 82 (123)
T 3aaa_C 4 GSMCDKEFMWALKNGDLDEVKDYVAKGEDV-NRTLEGGRKPLHYAADCGQLEILEFLLLKGADINAPDKHHITPLLSAVY 82 (123)
T ss_dssp ---CHHHHHHHHHTTCHHHHHHHHHTTCCT-TSCCTTSSCHHHHHHHTTCHHHHHHHHTTTCCTTCCCTTSCCHHHHHHH
T ss_pred ccccchHHHHHHHcCCHHHHHHHHHcCCCc-CccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCHHHHHHH
Confidence 456899999999999999999999999987 8899999999999999987 6789999999999999
Q ss_pred cCCHHHHHHHHhhCCchHHHHHHHhcccccccccccccCCCCcHHHHHHhcC
Q 039657 231 MGVTEMVEQILDTFPANQYLQALLNRKILGESIFRQVDSQGNSALHLAAKFG 282 (507)
Q Consensus 231 ~g~~~iv~~Ll~~~~~~~vv~~Ll~~~~~~~~~in~~D~~GnTpLHlAa~~g 282 (507)
.|+.++|++|++++ +.++.+|.+|+||||+|+..+
T Consensus 83 ~~~~~~v~~Ll~~g-----------------a~~~~~~~~g~t~l~~A~~~~ 117 (123)
T 3aaa_C 83 EGHVSCVKLLLSKG-----------------ADKTVKGPDGLTAFEATDNQA 117 (123)
T ss_dssp HTCHHHHHHHHHTT-----------------CCTTCCCTTSCCHHHHCCCHH
T ss_pred cCCHHHHHHHHHcC-----------------CCCCCcCCCCCCHHHHhCCHH
Confidence 99999666666654 457899999999999995443
No 83
>2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens}
Probab=99.75 E-value=1.7e-19 Score=173.16 Aligned_cols=131 Identities=15% Similarity=0.025 Sum_probs=106.3
Q ss_pred CCCCChHHHHHHHcCCHHHHHHHhhhCCcccccccCCCCcHHHHHHHcCC--------------cccCCCCCCccchhhh
Q 039657 165 TEKMDNKILLAAKIGVTEMVDRFLKSYPAVIQELNTSEKNLVLLTFEKKN--------------AQQSGRKETPMLIAAR 230 (507)
Q Consensus 165 d~~g~TpLh~Aa~~G~~~~v~~Ll~~~~~~~~~~d~~G~tpLh~A~~~~~--------------~~~d~~g~TpLH~Aa~ 230 (507)
+.+|.||||+||..|+.++|+.|++.++++ +.+|.+|+||||+|+..|+ +.+|.+|+||||+|+.
T Consensus 18 ~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~-~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~n~~d~~g~tpLh~A~~ 96 (229)
T 2vge_A 18 RLNPLVLLLDAALTGELEVVQQAVKEMNDP-SQPNEEGITALHNAICGANYSIVDFLITAGANVNSPDSHGWTPLHCAAS 96 (229)
T ss_dssp TSCHHHHHHHHHHHTCHHHHHHHHHHSSCT-TCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHH
T ss_pred ccchhHHHHHHHHcCCHHHHHHHHhcCCCC-CCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHH
Confidence 557899999999999999999999999987 8899999999999999988 6789999999999999
Q ss_pred cCCHHHHHHHHhhCCchHHHHHHHhccccccccccccc-CCCCcHHHHH--HhcCCCcccccCchhhhhHHHHHHhhhhh
Q 039657 231 MGVTEMVEQILDTFPANQYLQALLNRKILGESIFRQVD-SQGNSALHLA--AKFGDHRPWLLPGAALQMQWEIKWYQFVK 307 (507)
Q Consensus 231 ~g~~~iv~~Ll~~~~~~~vv~~Ll~~~~~~~~~in~~D-~~GnTpLHlA--a~~g~~~~v~~~gaal~~~~el~w~~~v~ 307 (507)
+|+.++|++|++.++ .++.+| .+|+||||+| +..|+.+++++ .++
T Consensus 97 ~g~~~~v~~Ll~~ga-----------------~~~~~~~~~g~tpL~~A~a~~~~~~~~v~~-----Ll~---------- 144 (229)
T 2vge_A 97 CNDTVICMALVQHGA-----------------AIFATTLSDGATAFEKCDPYREGYADCATY-----LAD---------- 144 (229)
T ss_dssp TTCHHHHHHHHTTTC-----------------CTTCCCSSTTCCTGGGCCTTSTTHHHHHHH-----HHH----------
T ss_pred cCCHHHHHHHHHcCC-----------------CcccccCCCCCCHHHHHHHHhcChHHHHHH-----HHH----------
Confidence 999996666666544 467776 6999999999 88888776532 010
Q ss_pred ccCCccccccccCCCCCccccccc
Q 039657 308 KSMPRHFFTRFNDNGKTPKEVFTE 331 (507)
Q Consensus 308 ~~~~~~~~~~~N~~G~Tpldl~~~ 331 (507)
...+.+.+|+.|.||+..+..
T Consensus 145 ---~ga~~~~~~~~~~~~l~~~~~ 165 (229)
T 2vge_A 145 ---VEQSMGLMNSGAVYALWDYSA 165 (229)
T ss_dssp ---HHHHTTTSGGGEEEESSCBCC
T ss_pred ---cCCCcccccCCchHHHHHHhh
Confidence 122345677788888765443
No 84
>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A
Probab=99.75 E-value=6.7e-19 Score=158.01 Aligned_cols=95 Identities=9% Similarity=0.027 Sum_probs=53.9
Q ss_pred CCCCChHHHHHHHcCCHHHHHHHhhhCCcccccccCCCCc-HHHHHHHcCC--------------cccCCCCCCccchhh
Q 039657 165 TEKMDNKILLAAKIGVTEMVDRFLKSYPAVIQELNTSEKN-LVLLTFEKKN--------------AQQSGRKETPMLIAA 229 (507)
Q Consensus 165 d~~g~TpLh~Aa~~G~~~~v~~Ll~~~~~~~~~~d~~G~t-pLh~A~~~~~--------------~~~d~~g~TpLH~Aa 229 (507)
|..|+||||+|+ .|+.++++.|++.++++ +.+|..|+| |||+|+..++ +.+|.+|+||||+|+
T Consensus 42 ~~~g~t~L~~A~-~~~~~~v~~Ll~~g~~~-~~~d~~g~ttpL~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~ 119 (156)
T 1bi7_B 42 NSYGRRPIQVMM-MGSARVAELLLLHGAEP-NCADPATLTRPVHDAAREGFLDTLVVLHRAGARLDVRDAWGRLPVDLAE 119 (156)
T ss_dssp CSSSCCTTTSSC-TTCHHHHHHHHTTTCCC-CCCCTTTCCCHHHHHHHHTCHHHHHHHHHHTCCSSCCCTTCCCHHHHHH
T ss_pred CCCCCCHHHHHH-cCCHHHHHHHHHcCCCC-CCcCCCCCcHHHHHHHHCCCHHHHHHHHHcCCCCcccCCCCCCHHHHHH
Confidence 445666666664 66666666666666665 666666666 6666666665 567778888888899
Q ss_pred hcCCHHHHHHHHhhCCchHHHHHHHhcccccccccccccCCCCcHHHHH
Q 039657 230 RMGVTEMVEQILDTFPANQYLQALLNRKILGESIFRQVDSQGNSALHLA 278 (507)
Q Consensus 230 ~~g~~~iv~~Ll~~~~~~~vv~~Ll~~~~~~~~~in~~D~~GnTpLHlA 278 (507)
.+|+.+++++|+++ + +.++.+|..|+||.+-+
T Consensus 120 ~~~~~~~v~~Ll~~-------------g----a~~~~~~~~g~t~~~~~ 151 (156)
T 1bi7_B 120 ELGHRDVARYLRAA-------------A----GGTRGSNHARIDAAEGP 151 (156)
T ss_dssp HHTCHHHHHHHSSC-------------C---------------------
T ss_pred HhCHHHHHHHHHHc-------------C----CCCCccCcCcCcccccC
Confidence 99999955555544 4 56799999999998744
No 85
>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A*
Probab=99.75 E-value=5.9e-19 Score=172.80 Aligned_cols=149 Identities=16% Similarity=0.134 Sum_probs=105.4
Q ss_pred CCCCCChHHHHHHHc---CCHHHHHHHhhhCCcc------cc----cccCCCCcHHHHHHHcCC--------------cc
Q 039657 164 GTEKMDNKILLAAKI---GVTEMVDRFLKSYPAV------IQ----ELNTSEKNLVLLTFEKKN--------------AQ 216 (507)
Q Consensus 164 ~d~~g~TpLh~Aa~~---G~~~~v~~Ll~~~~~~------~~----~~d~~G~tpLh~A~~~~~--------------~~ 216 (507)
.|..|+||||+||.. |+.++|+.|++.+++. ++ ..|..|+||||+|+..++ +.
T Consensus 50 ~~~~g~tpL~~A~~~~~~g~~~~v~~Ll~~ga~~~~~~~~i~~~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~ga~~~~ 129 (273)
T 2pnn_A 50 DPETGKTCLLKAMLNLHNGQNDTIALLLDVARKTDSLKQFVNASYTDSYYKGQTALHIAIERRNMTLVTLLVENGADVQA 129 (273)
T ss_dssp CTTTCCCHHHHHHHSCBTTBCHHHHHHHHHHHHTTCHHHHHTCCCCSTTTTTCCHHHHHHHTTCHHHHHHHHHTTCCTTC
T ss_pred cCcCCCCHHHHHHHHHhcCChHHHHHHHHhhccccchhHHhhcccccccCCCCCHHHHHHHcCCHHHHHHHHHCCCCcCc
Confidence 367899999999987 9999999999987542 12 267799999999999988 55
Q ss_pred cCC--------------CCCCccchhhhcCCHHHHHHHHhhCCchHHHHHHHhcccccccccccccCCCCcHHHHHHhcC
Q 039657 217 QSG--------------RKETPMLIAARMGVTEMVEQILDTFPANQYLQALLNRKILGESIFRQVDSQGNSALHLAAKFG 282 (507)
Q Consensus 217 ~d~--------------~g~TpLH~Aa~~g~~~iv~~Ll~~~~~~~vv~~Ll~~~~~~~~~in~~D~~GnTpLHlAa~~g 282 (507)
+|. .|+||||+|+.+|+.++|++|++.+. .+ +.+|.+|.+|+||||+|+..|
T Consensus 130 ~~~~~~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~----------~g----ad~~~~d~~g~tpLh~A~~~~ 195 (273)
T 2pnn_A 130 AANGDFFKKTKGRPGFYFGELPLSLAACTNQLAIVKFLLQNSW----------QP----ADISARDSVGNTVLHALVEVA 195 (273)
T ss_dssp CBCSGGGSSCSSSCCCCSCBSHHHHHHHTTCHHHHHHHHHCSS----------CC----CCTTCCCTTSCCHHHHHHHHC
T ss_pred cccccccccccccccccCCCCHHHHHHHcCCHHHHHHHHhccc----------CC----CCceeeCCCCCcHHHHHHHcc
Confidence 565 79999999999999996666666210 23 568999999999999999998
Q ss_pred CCcccccCchhhhh-HHHHHHhhhhhcc----CCccccccccCCCCCccccccccc
Q 039657 283 DHRPWLLPGAALQM-QWEIKWYQFVKKS----MPRHFFTRFNDNGKTPKEVFTETH 333 (507)
Q Consensus 283 ~~~~v~~~gaal~~-~~el~w~~~v~~~----~~~~~~~~~N~~G~Tpldl~~~~~ 333 (507)
+...-. ..+ ..-++++ ++.. ......+.+|.+|+||++++....
T Consensus 196 ~~~~~~-----~~~~~~~v~~L--l~~ga~~n~~~~~~~~~d~~g~TpL~~A~~~g 244 (273)
T 2pnn_A 196 DNTVDN-----TKFVTSMYNEI--LILGAKLHPTLKLEEITNRKGLTPLALAASSG 244 (273)
T ss_dssp CSCHHH-----HHHHHHHHHHH--HHHHHHHCTTCCGGGCCCTTSCCHHHHHHHTT
T ss_pred CcchhH-----HHHHHHHHHHH--HHhhhhcccccccccccCCCCCCHHHHHHHhC
Confidence 743210 000 0000110 0000 000112468999999999987653
No 86
>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis}
Probab=99.74 E-value=6.7e-19 Score=163.72 Aligned_cols=105 Identities=8% Similarity=-0.015 Sum_probs=90.2
Q ss_pred CCCChHHHHHHHcCCH----HHHHHHhhhCCcccccccCCCCcHHHHHHHcCC--------------------cccCCCC
Q 039657 166 EKMDNKILLAAKIGVT----EMVDRFLKSYPAVIQELNTSEKNLVLLTFEKKN--------------------AQQSGRK 221 (507)
Q Consensus 166 ~~g~TpLh~Aa~~G~~----~~v~~Ll~~~~~~~~~~d~~G~tpLh~A~~~~~--------------------~~~d~~g 221 (507)
..|+||||+|+.+|+. ++++.||+.++++ +.+|.+|+||||+|+..++ +.+|.+|
T Consensus 36 ~~g~T~Lh~A~~~~~~~~~~~iv~~Ll~~Gadv-n~~d~~g~TpLh~a~~~~~~~~~~~~~iv~~Ll~~Gadin~~d~~g 114 (186)
T 3t8k_A 36 VLKSNILYDVLRNNNDEARYKISMFLINKGADI-KSRTKEGTTLFFPLFQGGGNDITGTTELCKIFLEKGADITALYKPY 114 (186)
T ss_dssp HHTTTHHHHHTTCSCHHHHHHHHHHHHHTTCCS-SCCCTTCCCTHHHHHHHCTTCHHHHHHHHHHHHHTTCCSSSCBGGG
T ss_pred cCCCCHHHHHHHcCCcchHHHHHHHHHHCCCCC-CCCCCCCCcHHHHHHHcCCcchhhHHHHHHHHHHCCCCCCccCCCc
Confidence 5699999999999985 5999999999998 9999999999999998763 7899999
Q ss_pred C-CccchhhhcCC-----HHHHHHHHhhCCchHHHHHHHh-cccccccccccccCCCCcHHHHHHhcCCCcccc
Q 039657 222 E-TPMLIAARMGV-----TEMVEQILDTFPANQYLQALLN-RKILGESIFRQVDSQGNSALHLAAKFGDHRPWL 288 (507)
Q Consensus 222 ~-TpLH~Aa~~g~-----~~iv~~Ll~~~~~~~vv~~Ll~-~~~~~~~~in~~D~~GnTpLHlAa~~g~~~~v~ 288 (507)
+ ||||+|+..|. .+ ++++|++ .| +.+|.+|..|.||||+|++.|+.++++
T Consensus 115 ~ttpLh~A~~~~~~~~~~~~-------------iv~~Ll~~~g----ad~~~~d~~G~TpL~~A~~~~~~~~v~ 171 (186)
T 3t8k_A 115 KIVVFKNIFNYFVDENEMIP-------------LYKLIFSQSG----LQLLIKDKWGLTALEFVKRCQKPIALK 171 (186)
T ss_dssp TBCTTGGGGGCCSCHHHHHH-------------HHHHHHTSTT----CCTTCCCTTSCCHHHHHHTTTCHHHHH
T ss_pred CchHHHHHHHcCCChhhHHH-------------HHHHHHHhcC----CCCcccCCCCCCHHHHHHHcCCHHHHH
Confidence 9 99999999664 34 4555555 44 678999999999999999999987764
No 87
>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A
Probab=99.73 E-value=2.2e-18 Score=158.96 Aligned_cols=104 Identities=17% Similarity=0.192 Sum_probs=91.1
Q ss_pred CCCCChHHHHHHHcCCHHHHHHHhhhCCcccccccCCCCcHHHHHHHcCC--------------cccC-CCCCCccchhh
Q 039657 165 TEKMDNKILLAAKIGVTEMVDRFLKSYPAVIQELNTSEKNLVLLTFEKKN--------------AQQS-GRKETPMLIAA 229 (507)
Q Consensus 165 d~~g~TpLh~Aa~~G~~~~v~~Ll~~~~~~~~~~d~~G~tpLh~A~~~~~--------------~~~d-~~g~TpLH~Aa 229 (507)
+..|.||||+||..|+.++++.|++ +.++ +.+|.+|+||||+|+..++ +.+| .+|+||||+|+
T Consensus 41 ~~~g~t~L~~A~~~g~~~~v~~Ll~-~~~~-~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~~g~tpL~~A~ 118 (183)
T 3deo_A 41 VSEYETPWWTAARKADEQALSQLLE-DRDV-DAVDENGRTALLFVAGLGSDKCVRLLAEAGADLDHRDMRGGLTALHMAA 118 (183)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHTT-TSCT-TCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCSSSSCCHHHHHH
T ss_pred CCCCCCHHHHHHHcCCHHHHHHHHh-cCCC-CCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCCHHHHHH
Confidence 5679999999999999999999999 7776 8899999999999999987 5566 88999999999
Q ss_pred hcCCHHHHHHHHhhCCchHHHHHHHhcccccccccccccCCCCcHHHHHHhcCCCccc
Q 039657 230 RMGVTEMVEQILDTFPANQYLQALLNRKILGESIFRQVDSQGNSALHLAAKFGDHRPW 287 (507)
Q Consensus 230 ~~g~~~iv~~Ll~~~~~~~vv~~Ll~~~~~~~~~in~~D~~GnTpLHlAa~~g~~~~v 287 (507)
..|+.+++++|++++ +.++.+|.+|+||||+|++.++.+..
T Consensus 119 ~~~~~~~v~~Ll~~g-----------------a~~~~~d~~g~tpl~~A~~~~~~~~~ 159 (183)
T 3deo_A 119 GYVRPEVVEALVELG-----------------ADIEVEDERGLTALELAREILKTTPK 159 (183)
T ss_dssp HTTCHHHHHHHHHHT-----------------CCTTCCCTTSCCHHHHHHHHHHTCCC
T ss_pred hcCcHHHHHHHHHcC-----------------CCCcCCCCCCCCHHHHHHHhccCccc
Confidence 999999766666654 45789999999999999998775543
No 88
>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A
Probab=99.73 E-value=8.4e-19 Score=166.48 Aligned_cols=109 Identities=18% Similarity=0.156 Sum_probs=96.4
Q ss_pred ccCCCCCChHHHHHHHcCCHHHHHHHhhhCCcccccccCCCCcHHHHHHHcCC---------------cccCCCCCCccc
Q 039657 162 QSGTEKMDNKILLAAKIGVTEMVDRFLKSYPAVIQELNTSEKNLVLLTFEKKN---------------AQQSGRKETPML 226 (507)
Q Consensus 162 ~~~d~~g~TpLh~Aa~~G~~~~v~~Ll~~~~~~~~~~d~~G~tpLh~A~~~~~---------------~~~d~~g~TpLH 226 (507)
+.++..|.||||+||..|+.++|+.|++.++++ +.+|..|+||||+||..++ +.+|.+|+||||
T Consensus 67 ~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~g~~~~~~d~~g~tpL~ 145 (222)
T 3ehr_A 67 AEQAESIDNPLHEAAKRGNLSWLRECLDNRVGV-NGLDKAGSTALYWACHGGHKDIVEMLFTQPNIELNQQNKLGDTALH 145 (222)
T ss_dssp HHHEEEESCHHHHHHHHTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHTTCHHHHHHHTTSTTCCCCCCCTTSCCHHH
T ss_pred cccccccccccccccccCcHHHHHHHHhCCCCc-cccCCCCCCHHHHHHHcCCHHHHHHHHcCCCCCccccCCCCCCHHH
Confidence 345678999999999999999999999999997 8899999999999999987 678999999999
Q ss_pred hhhhcCCHHHHHHHHhhCCchHHHHHHHhcccccccccccccCCCCcHHHHHHhcCCCcccc
Q 039657 227 IAARMGVTEMVEQILDTFPANQYLQALLNRKILGESIFRQVDSQGNSALHLAAKFGDHRPWL 288 (507)
Q Consensus 227 ~Aa~~g~~~iv~~Ll~~~~~~~vv~~Ll~~~~~~~~~in~~D~~GnTpLHlAa~~g~~~~v~ 288 (507)
+|+.+|+.++|++|++++ +.++.+|.+|+||||+|+..|+.++++
T Consensus 146 ~A~~~~~~~~v~~Ll~~g-----------------a~~~~~~~~g~t~l~~A~~~~~~~~l~ 190 (222)
T 3ehr_A 146 AAAWKGYADIVQLLLAKG-----------------ARTDLRNIEKKLAFDMATNAACASLLK 190 (222)
T ss_dssp HHHHHTCHHHHHHHHHHT-----------------CCSCCCCTTSCCHHHHCCSHHHHHHHC
T ss_pred HHHHcCCHHHHHHHHHcC-----------------CCCccccCCCCCHHHHhcchhHHHHHH
Confidence 999999999666666653 457899999999999999988877654
No 89
>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B
Probab=99.71 E-value=1.7e-18 Score=166.74 Aligned_cols=127 Identities=15% Similarity=0.080 Sum_probs=76.3
Q ss_pred CCChHHHHHHHcCCHHHHHHHhhhCCcccccccCCCCcHHHHHHHcCC--------------cccCCCCCCccchhhhcC
Q 039657 167 KMDNKILLAAKIGVTEMVDRFLKSYPAVIQELNTSEKNLVLLTFEKKN--------------AQQSGRKETPMLIAARMG 232 (507)
Q Consensus 167 ~g~TpLh~Aa~~G~~~~v~~Ll~~~~~~~~~~d~~G~tpLh~A~~~~~--------------~~~d~~g~TpLH~Aa~~g 232 (507)
.|.||||.|+..|+.+.++.|++++.++ + .+..|.||||.|+..|+ +.+|.+|+||||+||.+|
T Consensus 4 ~g~t~L~~a~~~~~~~~~~~ll~~g~~~-~-~~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~g 81 (239)
T 1ycs_B 4 TGQVSLPPGKRTNLRKTGSERIAHGMRV-K-FNPLPLALLLDSSLEGEFDLVQRIIYEVDDPSLPNDEGITALHNAVCAG 81 (239)
T ss_dssp -----------------------------------CHHHHHHHHHHTCHHHHHHHTSTTSSCCCCCTTSCCHHHHHHHHT
T ss_pred cccccCchhhhhhhHHHHHHHhccCCCc-c-cCchhhHHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcC
Confidence 5999999999999999999999999987 3 35789999999999987 678999999999999999
Q ss_pred CHHHHHHHHhhCCchHHHHHHHhcccccccccccccCCCCcHHHHHHhcCCCcccccCchhhhhHHHHHHhhhhhccCCc
Q 039657 233 VTEMVEQILDTFPANQYLQALLNRKILGESIFRQVDSQGNSALHLAAKFGDHRPWLLPGAALQMQWEIKWYQFVKKSMPR 312 (507)
Q Consensus 233 ~~~iv~~Ll~~~~~~~vv~~Ll~~~~~~~~~in~~D~~GnTpLHlAa~~g~~~~v~~~gaal~~~~el~w~~~v~~~~~~ 312 (507)
+.++|++|++++ +.+|.+|.+|+||||+|+..|+.+++++ .++ ..
T Consensus 82 ~~~~v~~Ll~~g-----------------a~~~~~d~~g~tpL~~A~~~~~~~~v~~---------------Ll~---~g 126 (239)
T 1ycs_B 82 HTEIVKFLVQFG-----------------VNVNAADSDGWTPLHCAASCNNVQVCKF---------------LVE---SG 126 (239)
T ss_dssp CHHHHHHHHHHT-----------------CCTTCCCTTCCCHHHHHHHTTCHHHHHH---------------HHH---TT
T ss_pred CHHHHHHHHHcC-----------------CCCCccCCCCCCHHHHHHHcCCHHHHHH---------------HHH---cC
Confidence 999776666653 4579999999999999999999887632 111 23
Q ss_pred cccccccCCCC-Ccccccc
Q 039657 313 HFFTRFNDNGK-TPKEVFT 330 (507)
Q Consensus 313 ~~~~~~N~~G~-Tpldl~~ 330 (507)
.+.+.+|..|. ||++++.
T Consensus 127 a~~~~~~~~~~~t~l~~a~ 145 (239)
T 1ycs_B 127 AAVFAMTYSDMQTAADKCE 145 (239)
T ss_dssp CCTTCCCSSSCCCHHHHCC
T ss_pred CCcceecCCCCcchHHHHH
Confidence 45567777766 9999883
No 90
>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1
Probab=99.70 E-value=5.4e-17 Score=138.61 Aligned_cols=81 Identities=22% Similarity=0.276 Sum_probs=72.4
Q ss_pred CCCCChHHHHHHHcCCHHHHHHHhhhCCcccccccCCCCcHHHHHHHcCC--------------cccCCCCCCccchhhh
Q 039657 165 TEKMDNKILLAAKIGVTEMVDRFLKSYPAVIQELNTSEKNLVLLTFEKKN--------------AQQSGRKETPMLIAAR 230 (507)
Q Consensus 165 d~~g~TpLh~Aa~~G~~~~v~~Ll~~~~~~~~~~d~~G~tpLh~A~~~~~--------------~~~d~~g~TpLH~Aa~ 230 (507)
|..|.||||+|+..|+.++++.|++.++++ +.+|..|+||||+|+..++ +.+|.+|+||||+|+.
T Consensus 32 ~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~-~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~l~~A~~ 110 (126)
T 1n0r_A 32 DKNGRTPLHLAARNGHLEVVKLLLEAGADV-NAKDKNGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAAR 110 (126)
T ss_dssp CTTSCCHHHHHHHHTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHH
T ss_pred CCCCCcHHHHHHHcCcHHHHHHHHHcCCCC-cccCCCCCcHHHHHHHcChHHHHHHHHHcCCCCcccCCCCCCHHHHHHH
Confidence 557899999999999999999999998887 8889999999999998887 6688999999999999
Q ss_pred cCCHHHHHHHHhhCCc
Q 039657 231 MGVTEMVEQILDTFPA 246 (507)
Q Consensus 231 ~g~~~iv~~Ll~~~~~ 246 (507)
.|+.+++++|++++++
T Consensus 111 ~~~~~~~~~Ll~~Gad 126 (126)
T 1n0r_A 111 NGHLEVVKLLLEAGAY 126 (126)
T ss_dssp TTCHHHHHHHHHHTCC
T ss_pred cCcHHHHHHHHHcCCC
Confidence 9999999999888764
No 91
>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis}
Probab=99.70 E-value=2.3e-18 Score=160.10 Aligned_cols=139 Identities=9% Similarity=-0.004 Sum_probs=104.6
Q ss_pred CChHHHHHHHcCCHHHHHHHhhhCCcccccccCCCCcHHHHHHHcCC------------------cccCCCCCCccchhh
Q 039657 168 MDNKILLAAKIGVTEMVDRFLKSYPAVIQELNTSEKNLVLLTFEKKN------------------AQQSGRKETPMLIAA 229 (507)
Q Consensus 168 g~TpLh~Aa~~G~~~~v~~Ll~~~~~~~~~~d~~G~tpLh~A~~~~~------------------~~~d~~g~TpLH~Aa 229 (507)
+.++||.||+.|+.+.++.+++.+++. ..|..|+||||+|+..++ +.+|.+|+||||+|+
T Consensus 6 ~~~~l~~Aa~~g~~~~~~~l~~~~~~~--~~~~~g~T~Lh~A~~~~~~~~~~~iv~~Ll~~Gadvn~~d~~g~TpLh~a~ 83 (186)
T 3t8k_A 6 EYRTVSAAAMLGTYEDFLELFEKGYED--KESVLKSNILYDVLRNNNDEARYKISMFLINKGADIKSRTKEGTTLFFPLF 83 (186)
T ss_dssp HCSSHHHHHHHSCHHHHHHHHHHSSSC--HHHHHTTTHHHHHTTCSCHHHHHHHHHHHHHTTCCSSCCCTTCCCTHHHHH
T ss_pred cccHHHHHHHcCCHHHHHHHHhcCccc--ccccCCCCHHHHHHHcCCcchHHHHHHHHHHCCCCCCCCCCCCCcHHHHHH
Confidence 678999999999999999999987653 223789999999998764 788999999999999
Q ss_pred hcCCHHHHHHHHhhCCchHHHHHHHhcccccccccccccCCCC-cHHHHHHhcCCCcccccCchhhhhHHHHHHhhhhhc
Q 039657 230 RMGVTEMVEQILDTFPANQYLQALLNRKILGESIFRQVDSQGN-SALHLAAKFGDHRPWLLPGAALQMQWEIKWYQFVKK 308 (507)
Q Consensus 230 ~~g~~~iv~~Ll~~~~~~~vv~~Ll~~~~~~~~~in~~D~~Gn-TpLHlAa~~g~~~~v~~~gaal~~~~el~w~~~v~~ 308 (507)
..|+.++.+.+- ++++|++.| +.+|.+|..|+ ||||+|+..+..+.- ..+.++.
T Consensus 84 ~~~~~~~~~~~~-------iv~~Ll~~G----adin~~d~~g~ttpLh~A~~~~~~~~~--------------~~~iv~~ 138 (186)
T 3t8k_A 84 QGGGNDITGTTE-------LCKIFLEKG----ADITALYKPYKIVVFKNIFNYFVDENE--------------MIPLYKL 138 (186)
T ss_dssp HHCTTCHHHHHH-------HHHHHHHTT----CCSSSCBGGGTBCTTGGGGGCCSCHHH--------------HHHHHHH
T ss_pred HcCCcchhhHHH-------HHHHHHHCC----CCCCccCCCcCchHHHHHHHcCCChhh--------------HHHHHHH
Confidence 999843211110 556666666 67899999999 999999996653210 0001111
Q ss_pred c-C-CccccccccCCCCCccccccccc
Q 039657 309 S-M-PRHFFTRFNDNGKTPKEVFTETH 333 (507)
Q Consensus 309 ~-~-~~~~~~~~N~~G~Tpldl~~~~~ 333 (507)
+ . .+.+++.+|++|+||++++.+..
T Consensus 139 Ll~~~gad~~~~d~~G~TpL~~A~~~~ 165 (186)
T 3t8k_A 139 IFSQSGLQLLIKDKWGLTALEFVKRCQ 165 (186)
T ss_dssp HHTSTTCCTTCCCTTSCCHHHHHHTTT
T ss_pred HHHhcCCCCcccCCCCCCHHHHHHHcC
Confidence 1 1 45678999999999999998764
No 92
>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1
Probab=99.70 E-value=1.9e-17 Score=135.15 Aligned_cols=85 Identities=29% Similarity=0.356 Sum_probs=68.9
Q ss_pred CCChHHHHHHHcCCHHHHHHHhhhCCcccccccCCCCcHHHHHHHcCCcccCCCCCCccchhhhcCCHHHHHHHHhhCCc
Q 039657 167 KMDNKILLAAKIGVTEMVDRFLKSYPAVIQELNTSEKNLVLLTFEKKNAQQSGRKETPMLIAARMGVTEMVEQILDTFPA 246 (507)
Q Consensus 167 ~g~TpLh~Aa~~G~~~~v~~Ll~~~~~~~~~~d~~G~tpLh~A~~~~~~~~d~~g~TpLH~Aa~~g~~~iv~~Ll~~~~~ 246 (507)
+|+||||+||..|+.++++.|++.++++ +.+|.+ |+||||+|+.+|+.+++++|++.+
T Consensus 1 ~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-n~~d~~-------------------g~t~L~~A~~~~~~~~v~~Ll~~g-- 58 (93)
T 1n0q_A 1 NGRTPLHLAARNGHLEVVKLLLEAGADV-NAKDKN-------------------GRTPLHLAARNGHLEVVKLLLEAG-- 58 (93)
T ss_dssp --CCHHHHHHHHTCHHHHHHHHHTTCCT-TCCCTT-------------------SCCHHHHHHHTTCHHHHHHHHHTT--
T ss_pred CCCcHHHHHHHcCCHHHHHHHHHcCCCC-cccCCC-------------------CCCHHHHHHHcCCHHHHHHHHHcC--
Confidence 4899999999999999999999999987 555555 455555599999999666666553
Q ss_pred hHHHHHHHhcccccccccccccCCCCcHHHHHHhcCCCcccc
Q 039657 247 NQYLQALLNRKILGESIFRQVDSQGNSALHLAAKFGDHRPWL 288 (507)
Q Consensus 247 ~~vv~~Ll~~~~~~~~~in~~D~~GnTpLHlAa~~g~~~~v~ 288 (507)
+.++.+|.+|+||||+|+..|+.++++
T Consensus 59 ---------------a~~~~~d~~g~t~l~~A~~~~~~~~~~ 85 (93)
T 1n0q_A 59 ---------------ADVNAKDKNGRTPLHLAARNGHLEVVK 85 (93)
T ss_dssp ---------------CCTTCCCTTSCCHHHHHHHTTCHHHHH
T ss_pred ---------------CCCCccCCCCCCHHHHHHHcCCHHHHH
Confidence 457899999999999999999987753
No 93
>3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A
Probab=99.69 E-value=1.3e-17 Score=161.25 Aligned_cols=102 Identities=17% Similarity=0.182 Sum_probs=89.2
Q ss_pred CCCCChHHHHHHHcCCHHHHHHHhhhCCcccccccCCCCcHHHHHHHcCC--------------cccC-CCCCCccchhh
Q 039657 165 TEKMDNKILLAAKIGVTEMVDRFLKSYPAVIQELNTSEKNLVLLTFEKKN--------------AQQS-GRKETPMLIAA 229 (507)
Q Consensus 165 d~~g~TpLh~Aa~~G~~~~v~~Ll~~~~~~~~~~d~~G~tpLh~A~~~~~--------------~~~d-~~g~TpLH~Aa 229 (507)
+..|.||||+||..|+.++|+.|++ +.++ +.+|.+|+||||+||..|+ +.+| ..|+||||+|+
T Consensus 42 ~~~g~t~L~~A~~~g~~~~v~~Ll~-~~~~-~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~g~t~L~~A~ 119 (244)
T 3ui2_A 42 VSEYETPWWTAARKADEQALSQLLE-DRDV-DAVDENGRTALLFVAGLGSDKCVRLLAEAGADLDHRDMRGGLTALHMAA 119 (244)
T ss_dssp HHHHHHHHHHHHTTTCHHHHHHTTT-TCCT-TCBCTTSCBHHHHHHHHTCHHHHHHHHHTTCCTTCCCSSSCCCHHHHHH
T ss_pred ccCCCCHHHHHHHcCCHHHHHHHHc-CCCC-CCcCCCCCCHHHHHHHCCCHHHHHHHHHcCCCCCcCCCCCCCCHHHHHH
Confidence 4579999999999999999999999 7776 8899999999999999998 5666 88999999999
Q ss_pred hcCCHHHHHHHHhhCCchHHHHHHHhcccccccccccccCCCCcHHHHHHhcCCCc
Q 039657 230 RMGVTEMVEQILDTFPANQYLQALLNRKILGESIFRQVDSQGNSALHLAAKFGDHR 285 (507)
Q Consensus 230 ~~g~~~iv~~Ll~~~~~~~vv~~Ll~~~~~~~~~in~~D~~GnTpLHlAa~~g~~~ 285 (507)
.+|+.++|++|++++ +.+|.+|..|+||||+|+..++..
T Consensus 120 ~~g~~~~v~~Ll~~g-----------------a~~~~~d~~g~t~l~~A~~~~~~~ 158 (244)
T 3ui2_A 120 GYVRPEVVEALVELG-----------------ADIEVEDERGLTALELAREILKTT 158 (244)
T ss_dssp HTTCHHHHHHHHHTT-----------------CCTTCCCTTCCCHHHHHHHHHTTC
T ss_pred HcCCHHHHHHHHHCC-----------------CCCCCCCCCCCcHHHHHHHHHhcc
Confidence 999999666666553 457899999999999999876644
No 94
>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1
Probab=99.67 E-value=5.4e-17 Score=141.98 Aligned_cols=78 Identities=8% Similarity=-0.045 Sum_probs=68.9
Q ss_pred CCCCCChHHHHHHHcCCHHHHHHHhhhCCcccccccCCCCcHHHHHHHcCC--------------cccCCCCCCccchhh
Q 039657 164 GTEKMDNKILLAAKIGVTEMVDRFLKSYPAVIQELNTSEKNLVLLTFEKKN--------------AQQSGRKETPMLIAA 229 (507)
Q Consensus 164 ~d~~g~TpLh~Aa~~G~~~~v~~Ll~~~~~~~~~~d~~G~tpLh~A~~~~~--------------~~~d~~g~TpLH~Aa 229 (507)
+|..|+||||+|+..|+.++++.|++.++++ +.+|.+|+||||+|+..++ +.+|.+|+||||+|+
T Consensus 39 ~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~tpl~~A~ 117 (137)
T 3c5r_A 39 KDHAGWTPLHEACNHGHLKVVELLLQHKALV-NTTGYQNDSPLHDAAKNGHVDIVKLLLSYGASRNAVNIFGLRPVDYTD 117 (137)
T ss_dssp CCTTSCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCGGGCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCGGGGCC
T ss_pred CCCCCCCHHHHHHHcCCHHHHHHHHHcCCcc-cCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHh
Confidence 3667999999999999999999999999987 8899999999999999887 788999999999999
Q ss_pred hcCCHHHHHHHHh
Q 039657 230 RMGVTEMVEQILD 242 (507)
Q Consensus 230 ~~g~~~iv~~Ll~ 242 (507)
..++.+++++|.+
T Consensus 118 ~~~~~~~l~~l~~ 130 (137)
T 3c5r_A 118 DESMKSLLLLPEK 130 (137)
T ss_dssp CHHHHHHHSCC--
T ss_pred hccHHHHHhhccc
Confidence 9999996655444
No 95
>3jue_A Arfgap with coiled-coil, ANK repeat and PH domain containing protein 1; arfgap domain, zinc-binding module, GTPase activ metal-binding, nitration; 2.30A {Homo sapiens} PDB: 3t9k_A 4f1p_A
Probab=99.66 E-value=6.3e-17 Score=166.29 Aligned_cols=134 Identities=15% Similarity=0.110 Sum_probs=94.0
Q ss_pred CCCChHHHHHHHc-CCHHHHHHHhhhCCccccccc--CCCCcHHHHHHHcCC--------------cccCCCCCCccchh
Q 039657 166 EKMDNKILLAAKI-GVTEMVDRFLKSYPAVIQELN--TSEKNLVLLTFEKKN--------------AQQSGRKETPMLIA 228 (507)
Q Consensus 166 ~~g~TpLh~Aa~~-G~~~~v~~Ll~~~~~~~~~~d--~~G~tpLh~A~~~~~--------------~~~d~~g~TpLH~A 228 (507)
..+.||||.|+.. |+.++++.|++.++++ +..| .+|+||||+|+..++ +.+|.+|+||||+|
T Consensus 197 ~~~~t~L~~Aa~~~g~~~~v~~LL~~Gadv-n~~~~~~~g~TpLh~Aa~~g~~~iv~~LL~~Gadvn~~d~~G~TpLh~A 275 (368)
T 3jue_A 197 LHPGALLFRASGHPPSLPTMADALAHGADV-NWVNGGQDNATPLIQATAANSLLACEFLLQNGANVNQADSAGRGPLHHA 275 (368)
T ss_dssp CCHHHHHHHHTSSSCCHHHHHHHHHTTCCT-TCCCTTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHH
T ss_pred CCCCcHHHHHHHccCCHHHHHHHHHcCCCC-CccccccCCCCHHHHHHHCCCHHHHHHHHHcCCCCCCCCCCCCCHHHHH
Confidence 3567999999999 9999999999999997 7777 899999999999987 78899999999999
Q ss_pred hhcCCHHHHHHHHhhCCchHHHHHHHhcccccccccccccCCCCcHHHHHHhcCCCcccccCchhhhhHHHHHHhhhhhc
Q 039657 229 ARMGVTEMVEQILDTFPANQYLQALLNRKILGESIFRQVDSQGNSALHLAAKFGDHRPWLLPGAALQMQWEIKWYQFVKK 308 (507)
Q Consensus 229 a~~g~~~iv~~Ll~~~~~~~vv~~Ll~~~~~~~~~in~~D~~GnTpLHlAa~~g~~~~v~~~gaal~~~~el~w~~~v~~ 308 (507)
+..|+.++|++||++ + +.++.+|.+|+||||+|+..|+.+++.+ | . +.
T Consensus 276 ~~~g~~~~v~~LL~~-------------G----ad~~~~d~~G~TpL~~A~~~g~~~iv~l----L---------l--~~ 323 (368)
T 3jue_A 276 TILGHTGLACLFLKR-------------G----ADLGARDSEGRDPLTIAMETANADIVTL----L---------R--LA 323 (368)
T ss_dssp HHHTCHHHHHHHHHT-------------T----CCTTCCCTTSCCHHHHHHHTTCHHHHHH----H---------H--HH
T ss_pred HHcCcHHHHHHHHHC-------------c----CCCCCcCCCCCCHHHHHHHCCCHHHHHH----H---------H--Hc
Confidence 999999966666655 3 4579999999999999999999887632 0 0 00
Q ss_pred cCCccccccccCCCCCcccccccc
Q 039657 309 SMPRHFFTRFNDNGKTPKEVFTET 332 (507)
Q Consensus 309 ~~~~~~~~~~N~~G~Tpldl~~~~ 332 (507)
..........+..+.|+++++...
T Consensus 324 ~~~~~~~~~~~~~~~t~l~i~~~~ 347 (368)
T 3jue_A 324 KMREAEAAQGQAGDETYLDIFRDF 347 (368)
T ss_dssp HC----------------------
T ss_pred CCCcccccccCCCCCCHHHHHHHH
Confidence 111222345677889999998764
No 96
>2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium, SGC, metal binding protein; 2.06A {Homo sapiens}
Probab=99.65 E-value=9.2e-17 Score=160.62 Aligned_cols=104 Identities=13% Similarity=0.079 Sum_probs=90.1
Q ss_pred CCChHHHHHHHcCCHHHHHHHhhhCCccccc------ccCCCCcHHHHHHHc---CC--------------cccCCCCCC
Q 039657 167 KMDNKILLAAKIGVTEMVDRFLKSYPAVIQE------LNTSEKNLVLLTFEK---KN--------------AQQSGRKET 223 (507)
Q Consensus 167 ~g~TpLh~Aa~~G~~~~v~~Ll~~~~~~~~~------~d~~G~tpLh~A~~~---~~--------------~~~d~~g~T 223 (507)
.+.++||.|+..|+.+.|+.|++.++++ +. .|..|+||||+|+.. ++ +.+|.+|+|
T Consensus 150 ~~~~~L~~A~~~g~~~~v~~ll~~g~d~-~~~~~~~~~~~~g~t~Lh~A~~~~~~~~~~iv~~Ll~~gadvn~~d~~G~T 228 (301)
T 2b0o_E 150 PEPQRLWTAICNRDLLSVLEAFANGQDF-GQPLPGPDAQAPEELVLHLAVKVANQASLPLVDFIIQNGGHLDAKAADGNT 228 (301)
T ss_dssp -CHHHHHHHHHTTCHHHHHHHHHTTCCT-TSCEECSSSCSCEECHHHHHHHTCCTTTHHHHHHHHHHSSCTTCCCTTCCC
T ss_pred chHHHHhhhhhccCHHHHHHHHhcCCcc-cccCCCcccCCCCccHHHHHHHhcccCcHHHHHHHHhcCCCCCCCCCCCCC
Confidence 3567899999999999999999999997 44 689999999999987 43 678999999
Q ss_pred ccchhhhcCCHHHHHHHHhhCCchHHHHHHHhcccccccccccccCCCCcHHHHHHhcCCCcccc
Q 039657 224 PMLIAARMGVTEMVEQILDTFPANQYLQALLNRKILGESIFRQVDSQGNSALHLAAKFGDHRPWL 288 (507)
Q Consensus 224 pLH~Aa~~g~~~iv~~Ll~~~~~~~vv~~Ll~~~~~~~~~in~~D~~GnTpLHlAa~~g~~~~v~ 288 (507)
|||+|+.+|+.++|++|++++ +.++.+|.+|+||||+|+..|+.++++
T Consensus 229 pLh~A~~~g~~~~v~~Ll~~g-----------------ad~~~~d~~G~TpL~~A~~~~~~~iv~ 276 (301)
T 2b0o_E 229 ALHYAALYNQPDCLKLLLKGR-----------------ALVGTVNEAGETALDIARKKHHKECEE 276 (301)
T ss_dssp HHHHHHHTTCHHHHHHHHHTT-----------------CCCSCCCTTSCCHHHHHHHHTCHHHHH
T ss_pred HHHHHHHcCCHHHHHHHHHcC-----------------CCCCCcCCCCCCHHHHHHHcCCHHHHH
Confidence 999999999999666666553 457999999999999999999987753
No 97
>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C
Probab=99.65 E-value=4.7e-16 Score=135.99 Aligned_cols=80 Identities=19% Similarity=0.127 Sum_probs=73.5
Q ss_pred cCCCCCChHHHHHHHcCCHHHHHHHhhhCCcccccccCCCCcHHHHHHHcCC--------------cccCCCCCCccchh
Q 039657 163 SGTEKMDNKILLAAKIGVTEMVDRFLKSYPAVIQELNTSEKNLVLLTFEKKN--------------AQQSGRKETPMLIA 228 (507)
Q Consensus 163 ~~d~~g~TpLh~Aa~~G~~~~v~~Ll~~~~~~~~~~d~~G~tpLh~A~~~~~--------------~~~d~~g~TpLH~A 228 (507)
.+|..|+||||+||..|+.++++.|++.++++ +.+|.+|+||||+|+..++ +.+|.+|+||||+|
T Consensus 42 ~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~tpl~~A 120 (136)
T 2jab_A 42 AKDEYGLTPLYLATAHGHLEIVEVLLKNGADV-NAVDAIGFTPLHLAAFIGHLEIAEVLLKHGADVNAQDKFGKTAFDIS 120 (136)
T ss_dssp CCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCT-TCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHH
T ss_pred CcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC-CcCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCcCcCCCCCCHHHHH
Confidence 34667999999999999999999999999997 8899999999999999887 67899999999999
Q ss_pred hhcCCHHHHHHHHhh
Q 039657 229 ARMGVTEMVEQILDT 243 (507)
Q Consensus 229 a~~g~~~iv~~Ll~~ 243 (507)
+.+|+.+++++|++.
T Consensus 121 ~~~~~~~~~~~Ll~~ 135 (136)
T 2jab_A 121 IGNGNEDLAEILQKL 135 (136)
T ss_dssp HHTTCHHHHHHHHHC
T ss_pred HHCCCHHHHHHHHHc
Confidence 999999988888865
No 98
>2aja_A Ankyrin repeat family protein; NESG, Q5ZSV0, structural genomics, PSI, protein structure initiative; 2.80A {Legionella pneumophila} SCOP: a.118.24.1
Probab=99.65 E-value=5.8e-18 Score=174.56 Aligned_cols=143 Identities=12% Similarity=0.081 Sum_probs=97.3
Q ss_pred ChHHHHHHHcCCHHHHHHHhhhCCccccc--ccCCCCcHHHHHH-HcCC-------cccCCCCCCccchhhhcCCHHHHH
Q 039657 169 DNKILLAAKIGVTEMVDRFLKSYPAVIQE--LNTSEKNLVLLTF-EKKN-------AQQSGRKETPMLIAARMGVTEMVE 238 (507)
Q Consensus 169 ~TpLh~Aa~~G~~~~v~~Ll~~~~~~~~~--~d~~G~tpLh~A~-~~~~-------~~~d~~g~TpLH~Aa~~g~~~iv~ 238 (507)
.||||+||..|+.++|+.|++.++++ +. .|.+|+||||+|+ ..|+ -.....|.||||+|+.+|+.++|+
T Consensus 164 ~TpLh~Aa~~G~~eiv~~Ll~~ga~~-~~~~~d~~g~TpL~~Aa~~~G~~eiv~~Ll~~ga~~~taL~~Aa~~g~~evv~ 242 (376)
T 2aja_A 164 YHAFRLAAENGHLHVLNRLCELAPTE-ATAMIQAENYYAFRWAAVGRGHHNVINFLLDCPVMLAYAEIHEFEYGEKYVNP 242 (376)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHSCGGG-HHHHHHHHHHHHHHHHHSTTCCHHHHHHHTTSHHHHHHHHHCTTTTTTTTHHH
T ss_pred CCHHHHHHHCCCHHHHHHHHHcCCcc-chhccCCCCCCHHHHHHHHCCCHHHHHHHHhCCCccchHHHHHHHCCCHHHHH
Confidence 89999999999999999999999987 55 8899999999999 9998 122345899999999999999999
Q ss_pred HHHhhCCc-----------------h-----------HHHHHHHhccccc--------------ccc--cccccCCCCcH
Q 039657 239 QILDTFPA-----------------N-----------QYLQALLNRKILG--------------ESI--FRQVDSQGNSA 274 (507)
Q Consensus 239 ~Ll~~~~~-----------------~-----------~vv~~Ll~~~~~~--------------~~~--in~~D~~GnTp 274 (507)
+|++++++ . .+++.|+.++... ... ....++.++||
T Consensus 243 lL~~~ga~~~~~~~~l~~A~~~g~~~vv~~~~~~~~~~~~~~li~~~~~~~~~~~~~Ll~~~~vk~l~~~g~~~n~~~~~ 322 (376)
T 2aja_A 243 FIARHVNRLKEMHDAFKLSNPDGVFDLVTKSECLQGFYMLRNLIRRNDEVLLDDIRFLLSIPGIKALAPTATIPGDANEL 322 (376)
T ss_dssp HHHHHHHHHHHHHTTTTTTSSSSCCCCSSHHHHHHHHHHHHHHHHHCCGGGHHHHHHHHTSTTTGGGSSCCSSTTCCCHH
T ss_pred HHHhcCcccccccHHHHHHHHCCChhhhcHHhhhhhHHHHHHHHHcchhhHHHHHHHHHhChhhhhhhccCCCCCCccHH
Confidence 99998654 0 0123333332110 001 12345678999
Q ss_pred HHHHHhcCCCcccccCchhhhhHHHHHHhhhhhccCCccccccccCCCCCccccccccc
Q 039657 275 LHLAAKFGDHRPWLLPGAALQMQWEIKWYQFVKKSMPRHFFTRFNDNGKTPKEVFTETH 333 (507)
Q Consensus 275 LHlAa~~g~~~~v~~~gaal~~~~el~w~~~v~~~~~~~~~~~~N~~G~Tpldl~~~~~ 333 (507)
||+|+..|+.+++++ +.+ ....++..|+||.+.+...+
T Consensus 323 L~~A~~~g~~e~v~l-------------------Ll~--~~~v~~~~~~~~~~~~~~~~ 360 (376)
T 2aja_A 323 LRLALRLGNQGACAL-------------------LLS--IPSVLALTKANNYYINETGG 360 (376)
T ss_dssp HHHHHHHTCTTHHHH-------------------HTT--SHHHHHSCC-----------
T ss_pred HHHHHHcCcHHHHHH-------------------HHc--ChHHHHHHHHhccccccccc
Confidence 999999999988642 111 11467778889888776553
No 99
>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli}
Probab=99.64 E-value=2.2e-16 Score=133.73 Aligned_cols=93 Identities=18% Similarity=0.163 Sum_probs=81.5
Q ss_pred CCCCCChHHHHHHHcCCHHHHHHHhhhCCcccccccCCCCcHHHHHHHcCC--------------cccCCCCCCccchhh
Q 039657 164 GTEKMDNKILLAAKIGVTEMVDRFLKSYPAVIQELNTSEKNLVLLTFEKKN--------------AQQSGRKETPMLIAA 229 (507)
Q Consensus 164 ~d~~g~TpLh~Aa~~G~~~~v~~Ll~~~~~~~~~~d~~G~tpLh~A~~~~~--------------~~~d~~g~TpLH~Aa 229 (507)
+|++|+||||+||..|+.++++.|++.++++ +.+|..|+||||+|+..++ +.+|.+|+||||+|+
T Consensus 5 ~d~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~-~~~d~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~d~~g~tpl~~A~ 83 (115)
T 2l6b_A 5 GSKDGNTPLHNAAKNGHAEEVKKLLSKGADV-NARSKDGNTPLHLAAKNGHAEIVKLLLAKGADVNARSKDGNTPEHLAK 83 (115)
T ss_dssp CSCSSCCHHHHHHHHTCHHHHHHHTTTTCCS-SCCCSSSCCTTHHHHTTTCHHHHHHHTTTTCCTTCCCTTCCCTTHHHH
T ss_pred cCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC-CCcCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCcccCCCCCCHHHHHH
Confidence 4778999999999999999999999999997 8899999999999999887 678999999999999
Q ss_pred hcCCHHHHHHHHhhCCchHHHHHHHhcccccccccccccCCCCcH
Q 039657 230 RMGVTEMVEQILDTFPANQYLQALLNRKILGESIFRQVDSQGNSA 274 (507)
Q Consensus 230 ~~g~~~iv~~Ll~~~~~~~vv~~Ll~~~~~~~~~in~~D~~GnTp 274 (507)
..|+.+++++|++++ +.+|.+|..|.||
T Consensus 84 ~~~~~~~~~~Ll~~g-----------------a~~n~~~~~~~~~ 111 (115)
T 2l6b_A 84 KNGHHEIVKLLDAKG-----------------ADVNARSWGSSHH 111 (115)
T ss_dssp TTTCHHHHHHHHTTS-----------------SSHHHHSCCCC--
T ss_pred HCCCHHHHHHHHHcC-----------------CCCCcCCcccccc
Confidence 999999666666554 4578999999987
No 100
>2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium, SGC, metal binding protein; 2.06A {Homo sapiens}
Probab=99.64 E-value=1.1e-16 Score=160.00 Aligned_cols=96 Identities=14% Similarity=0.076 Sum_probs=78.3
Q ss_pred CCCCChHHHHHHHc---CCHHHHHHHhhhCCcccccccCCCCcHHHHHHHcCC--------------cccCCCCCCccch
Q 039657 165 TEKMDNKILLAAKI---GVTEMVDRFLKSYPAVIQELNTSEKNLVLLTFEKKN--------------AQQSGRKETPMLI 227 (507)
Q Consensus 165 d~~g~TpLh~Aa~~---G~~~~v~~Ll~~~~~~~~~~d~~G~tpLh~A~~~~~--------------~~~d~~g~TpLH~ 227 (507)
+..|+||||+||.. |+.++++.|++.++++ +.+|.+|+||||+|+..|+ +.+|.+|+||||+
T Consensus 187 ~~~g~t~Lh~A~~~~~~~~~~iv~~Ll~~gadv-n~~d~~G~TpLh~A~~~g~~~~v~~Ll~~gad~~~~d~~G~TpL~~ 265 (301)
T 2b0o_E 187 QAPEELVLHLAVKVANQASLPLVDFIIQNGGHL-DAKAADGNTALHYAALYNQPDCLKLLLKGRALVGTVNEAGETALDI 265 (301)
T ss_dssp CSCEECHHHHHHHTCCTTTHHHHHHHHHHSSCT-TCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCCSCCCTTSCCHHHH
T ss_pred CCCCccHHHHHHHhcccCcHHHHHHHHhcCCCC-CCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHH
Confidence 66799999999997 8999999999999997 8899999999999999987 7889999999999
Q ss_pred hhhcCCHHHHHHHHhhCCchHHHHHHHhcccccccccccccCCCCcHHHHHHhcCCC
Q 039657 228 AARMGVTEMVEQILDTFPANQYLQALLNRKILGESIFRQVDSQGNSALHLAAKFGDH 284 (507)
Q Consensus 228 Aa~~g~~~iv~~Ll~~~~~~~vv~~Ll~~~~~~~~~in~~D~~GnTpLHlAa~~g~~ 284 (507)
|+..|+.+++++|+++ + + ..|+||||+|++.|+.
T Consensus 266 A~~~~~~~iv~~Ll~~-------------g----a------~~g~tpLh~A~~~g~~ 299 (301)
T 2b0o_E 266 ARKKHHKECEELLEQA-------------Q----A------GTFAFPLHVDYSWVIS 299 (301)
T ss_dssp HHHHTCHHHHHHHHHH-------------H----H------HTTSSCCC--------
T ss_pred HHHcCCHHHHHHHHHh-------------c----C------CCCCChhHHHHhcCCc
Confidence 9999999966666654 3 1 1589999999999873
No 101
>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A
Probab=99.62 E-value=1.6e-16 Score=150.61 Aligned_cols=83 Identities=10% Similarity=0.052 Sum_probs=69.1
Q ss_pred cCCCCCChHHHHHHHcCCHHHHHHHhhh-CCcccccccCCCCcHHHHHHHcCC--------------cccCCCCCCccch
Q 039657 163 SGTEKMDNKILLAAKIGVTEMVDRFLKS-YPAVIQELNTSEKNLVLLTFEKKN--------------AQQSGRKETPMLI 227 (507)
Q Consensus 163 ~~d~~g~TpLh~Aa~~G~~~~v~~Ll~~-~~~~~~~~d~~G~tpLh~A~~~~~--------------~~~d~~g~TpLH~ 227 (507)
.+|..|+||||+||..|+.++|+.|++. +.++ +.+|.+|+||||+|+..|+ +.+|.+|+||||+
T Consensus 101 ~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~g~~~-~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~ 179 (222)
T 3ehr_A 101 GLDKAGSTALYWACHGGHKDIVEMLFTQPNIEL-NQQNKLGDTALHAAAWKGYADIVQLLLAKGARTDLRNIEKKLAFDM 179 (222)
T ss_dssp CCCTTSCCHHHHHHHTTCHHHHHHHTTSTTCCC-CCCCTTSCCHHHHHHHHTCHHHHHHHHHHTCCSCCCCTTSCCHHHH
T ss_pred ccCCCCCCHHHHHHHcCCHHHHHHHHcCCCCCc-cccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCCHHHH
Confidence 3466799999999999999999999998 7776 8999999999999999987 7889999999999
Q ss_pred hhhcCCHHHHHHHHhhCCc
Q 039657 228 AARMGVTEMVEQILDTFPA 246 (507)
Q Consensus 228 Aa~~g~~~iv~~Ll~~~~~ 246 (507)
|+..|+.++++.|++....
T Consensus 180 A~~~~~~~~l~~l~~~~~~ 198 (222)
T 3ehr_A 180 ATNAACASLLKKKQGTDAV 198 (222)
T ss_dssp CCSHHHHHHHC--------
T ss_pred hcchhHHHHHHHHhccchh
Confidence 9999999988887776554
No 102
>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1
Probab=99.61 E-value=1.5e-15 Score=123.70 Aligned_cols=65 Identities=26% Similarity=0.325 Sum_probs=52.9
Q ss_pred ccCCCCCChHHHHHHHcCCHHHHHHHhhhCCcccccccCCCCcHHHHHHHcCCcccCCCCCCccchhhhcCCHHHHHHHH
Q 039657 162 QSGTEKMDNKILLAAKIGVTEMVDRFLKSYPAVIQELNTSEKNLVLLTFEKKNAQQSGRKETPMLIAARMGVTEMVEQIL 241 (507)
Q Consensus 162 ~~~d~~g~TpLh~Aa~~G~~~~v~~Ll~~~~~~~~~~d~~G~tpLh~A~~~~~~~~d~~g~TpLH~Aa~~g~~~iv~~Ll 241 (507)
+.+|..|+||||+|+..|+.++++.|++.++++ +.+|.+ |+||||+|+..|+.+++++|+
T Consensus 29 n~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~-~~~d~~-------------------g~t~l~~A~~~~~~~~~~~Ll 88 (93)
T 1n0q_A 29 NAKDKNGRTPLHLAARNGHLEVVKLLLEAGADV-NAKDKN-------------------GRTPLHLAARNGHLEVVKLLL 88 (93)
T ss_dssp TCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTT-------------------SCCHHHHHHHTTCHHHHHHHH
T ss_pred cccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC-CccCCC-------------------CCCHHHHHHHcCCHHHHHHHH
Confidence 344678999999999999999999999999987 455555 555555599999999888888
Q ss_pred hhCCc
Q 039657 242 DTFPA 246 (507)
Q Consensus 242 ~~~~~ 246 (507)
+++++
T Consensus 89 ~~ga~ 93 (93)
T 1n0q_A 89 EAGAY 93 (93)
T ss_dssp HTTCC
T ss_pred HcCCC
Confidence 87653
No 103
>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A
Probab=99.60 E-value=1e-15 Score=131.35 Aligned_cols=73 Identities=11% Similarity=0.084 Sum_probs=64.1
Q ss_pred cCCCCCChHHHHHHHcCCHHHHHHHhhhCCcccccccCCCCcHHHHHHHcCC--------------cccCCCCCCccchh
Q 039657 163 SGTEKMDNKILLAAKIGVTEMVDRFLKSYPAVIQELNTSEKNLVLLTFEKKN--------------AQQSGRKETPMLIA 228 (507)
Q Consensus 163 ~~d~~g~TpLh~Aa~~G~~~~v~~Ll~~~~~~~~~~d~~G~tpLh~A~~~~~--------------~~~d~~g~TpLH~A 228 (507)
.+|..|+||||+||..|+.++++.|++.++++ +.+|.+|+||||+|+..++ +.+|.+|+||||+|
T Consensus 35 ~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A 113 (123)
T 3aaa_C 35 RTLEGGRKPLHYAADCGQLEILEFLLLKGADI-NAPDKHHITPLLSAVYEGHVSCVKLLLSKGADKTVKGPDGLTAFEAT 113 (123)
T ss_dssp SCCTTSSCHHHHHHHTTCHHHHHHHHTTTCCT-TCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHC
T ss_pred ccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCC-CcCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHh
Confidence 33667999999999999999999999999997 8899999999999999887 67899999999999
Q ss_pred hhcCCHHH
Q 039657 229 ARMGVTEM 236 (507)
Q Consensus 229 a~~g~~~i 236 (507)
+..+..++
T Consensus 114 ~~~~~~~l 121 (123)
T 3aaa_C 114 DNQAIKAL 121 (123)
T ss_dssp CCHHHHHH
T ss_pred CCHHHHHH
Confidence 76555553
No 104
>1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1
Probab=99.60 E-value=1.3e-15 Score=150.59 Aligned_cols=104 Identities=11% Similarity=0.082 Sum_probs=89.9
Q ss_pred CChHHHHHHHcCCHHHHHHHhhhCCcc-----cccccCCCCcHHHHHHHc---CC--------------cccCCCCCCcc
Q 039657 168 MDNKILLAAKIGVTEMVDRFLKSYPAV-----IQELNTSEKNLVLLTFEK---KN--------------AQQSGRKETPM 225 (507)
Q Consensus 168 g~TpLh~Aa~~G~~~~v~~Ll~~~~~~-----~~~~d~~G~tpLh~A~~~---~~--------------~~~d~~g~TpL 225 (507)
..++||.|+..|+.+.++.+++.++++ ++..|..|+||||+|+.. ++ +.+|.+|+|||
T Consensus 130 ~l~~l~~a~~~~d~~~~~~ll~~g~~~~~~~~l~~~~~~g~t~Lh~A~~~~~~~~~~~v~~Ll~~ga~in~~d~~g~TpL 209 (278)
T 1dcq_A 130 KLHSLCEAVKTRDIFGLLQAYADGVDLTEKIPLANGHEPDETALHLAVRSVDRTSLHIVDFLVQNSGNLDKQTGKGSTAL 209 (278)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHTTCCTTSBCCCSSCSSTTCBHHHHHHHHCCTTTHHHHHHHHHHCSCTTCCCTTCCCHH
T ss_pred hhhhhhhHhhhcccHHHHHHHHhhcchhhhccccccccCCCCcchHHHHhcccchHHHHHHHHHCCCCccccCCCCCCHH
Confidence 457999999999999999999999886 244589999999999998 54 67899999999
Q ss_pred chhhhcCCHHHHHHHHhhCCchHHHHHHHhcccccccccccccCCCCcHHHHHHhcCCCcccc
Q 039657 226 LIAARMGVTEMVEQILDTFPANQYLQALLNRKILGESIFRQVDSQGNSALHLAAKFGDHRPWL 288 (507)
Q Consensus 226 H~Aa~~g~~~iv~~Ll~~~~~~~vv~~Ll~~~~~~~~~in~~D~~GnTpLHlAa~~g~~~~v~ 288 (507)
|+|+.+|+.++|++|++++ ++++.+|.+|+||||+|+..|+.++++
T Consensus 210 h~A~~~g~~~~v~~Ll~~g-----------------ad~~~~d~~g~tpL~~A~~~~~~~~v~ 255 (278)
T 1dcq_A 210 HYCCLTDNAECLKLLLRGK-----------------ASIEIANESGETPLDIAKRLKHEHCEE 255 (278)
T ss_dssp HHHHHTTCHHHHHHHHHTT-----------------CCTTCCCTTSCCHHHHHHHTTCHHHHH
T ss_pred HHHHHcCCHHHHHHHHHcC-----------------CCCCCccCCCCCHHHHHHHcCCHHHHH
Confidence 9999999999666666553 457999999999999999999988763
No 105
>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A
Probab=99.59 E-value=1.7e-15 Score=127.83 Aligned_cols=89 Identities=22% Similarity=0.306 Sum_probs=70.7
Q ss_pred ccCCCCCChHHHHHHHcCCHHHHHHHhhhCCcccccccCCCCcHHHHHHHcCCcccCCCCCCccchhhhcCCHHHHHHHH
Q 039657 162 QSGTEKMDNKILLAAKIGVTEMVDRFLKSYPAVIQELNTSEKNLVLLTFEKKNAQQSGRKETPMLIAARMGVTEMVEQIL 241 (507)
Q Consensus 162 ~~~d~~g~TpLh~Aa~~G~~~~v~~Ll~~~~~~~~~~d~~G~tpLh~A~~~~~~~~d~~g~TpLH~Aa~~g~~~iv~~Ll 241 (507)
...|.+|.||||+||..|+.++++.|++.++++ +.+|.. |+||||+|+.+|+.+++++|+
T Consensus 18 ~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~i-~~~d~~-------------------g~tpLh~A~~~~~~~~v~~Ll 77 (110)
T 2zgd_A 18 SHMGSDLGKKLLEAARAGQDDEVRILMANGADV-AAKDKN-------------------GSTPLHLAARNGHLEVVKLLL 77 (110)
T ss_dssp ----CCHHHHHHHHHHHTCHHHHHHHHHTTCCT-TCCCTT-------------------CCCHHHHHHHTTCHHHHHHHH
T ss_pred cccCCccchHHHHHHHcCCHHHHHHHHHcCCCC-CccCCC-------------------CCCHHHHHHHcCCHHHHHHHH
Confidence 445788999999999999999999999999887 444555 555555599999999666666
Q ss_pred hhCCchHHHHHHHhcccccccccccccCCCCcHHHHHHhcCCCccc
Q 039657 242 DTFPANQYLQALLNRKILGESIFRQVDSQGNSALHLAAKFGDHRPW 287 (507)
Q Consensus 242 ~~~~~~~vv~~Ll~~~~~~~~~in~~D~~GnTpLHlAa~~g~~~~v 287 (507)
++ + +.++.+|..|+||||+|+..|+.+++
T Consensus 78 ~~-------------g----a~~~~~d~~g~tpl~~A~~~~~~~~~ 106 (110)
T 2zgd_A 78 EA-------------G----ADVXAQDKFGKTAFDISIDNGNEDLA 106 (110)
T ss_dssp HT-------------T----CCTTCCCTTSCCHHHHHHHHTCHHHH
T ss_pred Hc-------------C----CCccccccCCCcHHHHHHHcCCHHHH
Confidence 55 3 45789999999999999999997765
No 106
>3lvq_E ARF-GAP with SH3 domain, ANK repeat and PH domain containing protein 3, ADP-ribosylation...; GDP, ASAP3, UPLC1, linkers, alternat splicing; HET: GDP; 3.38A {Homo sapiens} PDB: 3lvr_E*
Probab=99.58 E-value=1.9e-15 Score=161.45 Aligned_cols=103 Identities=14% Similarity=0.107 Sum_probs=90.1
Q ss_pred CChHHHHHHHcCCHHHHHHHhhhCCcccccc------cCCCCcHHHHHHH---cCC--------------cccCCCCCCc
Q 039657 168 MDNKILLAAKIGVTEMVDRFLKSYPAVIQEL------NTSEKNLVLLTFE---KKN--------------AQQSGRKETP 224 (507)
Q Consensus 168 g~TpLh~Aa~~G~~~~v~~Ll~~~~~~~~~~------d~~G~tpLh~A~~---~~~--------------~~~d~~g~Tp 224 (507)
..+.||.|+..|+.++|+.|++.++++ +.. |..|+||||+||. .|+ +.+|.+|+||
T Consensus 132 ~~~~L~~A~~~g~~~~v~~ll~~g~~~-n~~~~~~~~~~~g~t~Lh~A~~~a~~g~~~~v~~Ll~~ga~vn~~d~~g~Tp 210 (497)
T 3lvq_E 132 EPQRLWTAICNRDLLSVLEAFANGQDF-GQPLPGPDAQAPEELVLHLAVKVANQASLPLVDFIIQNGGHLDAKAADGNTA 210 (497)
T ss_dssp CHHHHHHHHHHTCHHHHHHHHHTTCCS-SSCBCCSSSCCSCBCHHHHHHHTCCTTTHHHHHHHHHHSCCTTCCCSSSCCH
T ss_pred cHHHHHHHHhccCHHHHHHHHhhcccc-cCCCCCcccccccchHHHHHHHhcccccHHHHHHHHHcCCCCCccCCCCCcH
Confidence 447899999999999999999999987 555 8899999999976 554 7899999999
Q ss_pred cchhhhcCCHHHHHHHHhhCCchHHHHHHHhcccccccccccccCCCCcHHHHHHhcCCCcccc
Q 039657 225 MLIAARMGVTEMVEQILDTFPANQYLQALLNRKILGESIFRQVDSQGNSALHLAAKFGDHRPWL 288 (507)
Q Consensus 225 LH~Aa~~g~~~iv~~Ll~~~~~~~vv~~Ll~~~~~~~~~in~~D~~GnTpLHlAa~~g~~~~v~ 288 (507)
||+||.+|+.++|++||++ | +++|.+|.+|+||||+|+..|+.++++
T Consensus 211 Lh~A~~~g~~~~v~~Ll~~-------------g----a~~~~~d~~g~tpl~~A~~~~~~~~~~ 257 (497)
T 3lvq_E 211 LHYAALYNQPDCLKLLLKG-------------R----ALVGTVNEAGETALDIARKKHHKECEE 257 (497)
T ss_dssp HHHHTTTTCHHHHHHHHHT-------------C----CCCSCCCTTCCCHHHHHHHTTCHHHHH
T ss_pred HHHHHHcCCHHHHHHHHHc-------------C----CCCCCcCCCCCCHHHHHHHcCCHHHHH
Confidence 9999999999966666555 4 568999999999999999999988765
No 107
>3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A
Probab=99.57 E-value=2.5e-15 Score=145.19 Aligned_cols=74 Identities=15% Similarity=0.166 Sum_probs=67.0
Q ss_pred CCCChHHHHHHHcCCHHHHHHHhhhCCcccccccCCCCcHHHHHHHcCCcccCCCCCCccchhhhcCCHHHHHHHHhh
Q 039657 166 EKMDNKILLAAKIGVTEMVDRFLKSYPAVIQELNTSEKNLVLLTFEKKNAQQSGRKETPMLIAARMGVTEMVEQILDT 243 (507)
Q Consensus 166 ~~g~TpLh~Aa~~G~~~~v~~Ll~~~~~~~~~~d~~G~tpLh~A~~~~~~~~d~~g~TpLH~Aa~~g~~~iv~~Ll~~ 243 (507)
..|+||||+||..|+.++|+.|++.++++ +.+|.+|+||||+|+..++ +..+.||||+|+..|+.+++++|++.
T Consensus 109 ~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~-~~~d~~g~t~l~~A~~~~~---~~~~~~~l~~a~~~g~~~iv~~L~~~ 182 (244)
T 3ui2_A 109 RGGLTALHMAAGYVRPEVVEALVELGADI-EVEDERGLTALELAREILK---TTPKGNPMQFGRRIGLEKVINVLEGQ 182 (244)
T ss_dssp SSCCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTCCCHHHHHHHHHT---TCCCSSHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHcCCHHHHHHHHHCCCCC-CCCCCCCCcHHHHHHHHHh---ccCCCCHHHHHHHcChHHHHHHHHHh
Confidence 56999999999999999999999999997 8899999999999998654 36789999999999999977777765
No 108
>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A
Probab=99.57 E-value=2.2e-15 Score=138.66 Aligned_cols=74 Identities=15% Similarity=0.162 Sum_probs=67.0
Q ss_pred CCCChHHHHHHHcCCHHHHHHHhhhCCcccccccCCCCcHHHHHHHcCCcccCCCCCCccchhhhcCCHHHHHHHHhh
Q 039657 166 EKMDNKILLAAKIGVTEMVDRFLKSYPAVIQELNTSEKNLVLLTFEKKNAQQSGRKETPMLIAARMGVTEMVEQILDT 243 (507)
Q Consensus 166 ~~g~TpLh~Aa~~G~~~~v~~Ll~~~~~~~~~~d~~G~tpLh~A~~~~~~~~d~~g~TpLH~Aa~~g~~~iv~~Ll~~ 243 (507)
..|+||||+|+..|+.++++.|++.++++ +.+|.+|+||||+|++.++. ..+.|||++|+..|+.++++.|.++
T Consensus 108 ~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~-~~~d~~g~tpl~~A~~~~~~---~~~~~~l~~a~~~~~~~i~~~L~~~ 181 (183)
T 3deo_A 108 RGGLTALHMAAGYVRPEVVEALVELGADI-EVEDERGLTALELAREILKT---TPKGNPMQFGRRIGLEKVINVLEGQ 181 (183)
T ss_dssp SSSCCHHHHHHHTTCHHHHHHHHHHTCCT-TCCCTTSCCHHHHHHHHHHT---CCCCSHHHHHHHHHHHHHHHHHHTC
T ss_pred CCCCCHHHHHHhcCcHHHHHHHHHcCCCC-cCCCCCCCCHHHHHHHhccC---cccccHHHHHHHcCHHHHHHHHHHh
Confidence 57999999999999999999999999997 88999999999999987654 4678999999999999988888765
No 109
>3jue_A Arfgap with coiled-coil, ANK repeat and PH domain containing protein 1; arfgap domain, zinc-binding module, GTPase activ metal-binding, nitration; 2.30A {Homo sapiens} PDB: 3t9k_A 4f1p_A
Probab=99.50 E-value=4.3e-14 Score=145.12 Aligned_cols=103 Identities=11% Similarity=0.089 Sum_probs=72.5
Q ss_pred CCCChHHHHHHHcCCHHHHHHHhhhCCcccccccCCCCcHHHHHHHcCC--------------cccCCCCCCccchhhhc
Q 039657 166 EKMDNKILLAAKIGVTEMVDRFLKSYPAVIQELNTSEKNLVLLTFEKKN--------------AQQSGRKETPMLIAARM 231 (507)
Q Consensus 166 ~~g~TpLh~Aa~~G~~~~v~~Ll~~~~~~~~~~d~~G~tpLh~A~~~~~--------------~~~d~~g~TpLH~Aa~~ 231 (507)
..|.||||+||..|+.++|+.|++.++++ +.+|.+|+||||+|+..++ +.+|.+|+||||+|+..
T Consensus 233 ~~g~TpLh~Aa~~g~~~iv~~LL~~Gadv-n~~d~~G~TpLh~A~~~g~~~~v~~LL~~Gad~~~~d~~G~TpL~~A~~~ 311 (368)
T 3jue_A 233 QDNATPLIQATAANSLLACEFLLQNGANV-NQADSAGRGPLHHATILGHTGLACLFLKRGADLGARDSEGRDPLTIAMET 311 (368)
T ss_dssp TTCCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHT
T ss_pred cCCCCHHHHHHHCCCHHHHHHHHHcCCCC-CCCCCCCCCHHHHHHHcCcHHHHHHHHHCcCCCCCcCCCCCCHHHHHHHC
Confidence 57999999999999999999999999997 8999999999999999987 77899999999999999
Q ss_pred CCHHHHHHHHhhCCchHHHHHHHhcccccccccccccCCCCcHHHHHHhcCC
Q 039657 232 GVTEMVEQILDTFPANQYLQALLNRKILGESIFRQVDSQGNSALHLAAKFGD 283 (507)
Q Consensus 232 g~~~iv~~Ll~~~~~~~vv~~Ll~~~~~~~~~in~~D~~GnTpLHlAa~~g~ 283 (507)
|+.++|++|++.... .......+..|.|+|+++.....
T Consensus 312 g~~~iv~lLl~~~~~--------------~~~~~~~~~~~~t~l~i~~~~~~ 349 (368)
T 3jue_A 312 ANADIVTLLRLAKMR--------------EAEAAQGQAGDETYLDIFRDFSL 349 (368)
T ss_dssp TCHHHHHHHHHHHC--------------------------------------
T ss_pred CCHHHHHHHHHcCCC--------------cccccccCCCCCCHHHHHHHHHh
Confidence 999977777765332 12334567788999998876543
No 110
>1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1
Probab=99.49 E-value=3.4e-14 Score=140.29 Aligned_cols=82 Identities=17% Similarity=0.203 Sum_probs=74.2
Q ss_pred ccCCCCCChHHHHHHHc---CCHHHHHHHhhhCCcccccccCCCCcHHHHHHHcCC--------------cccCCCCCCc
Q 039657 162 QSGTEKMDNKILLAAKI---GVTEMVDRFLKSYPAVIQELNTSEKNLVLLTFEKKN--------------AQQSGRKETP 224 (507)
Q Consensus 162 ~~~d~~g~TpLh~Aa~~---G~~~~v~~Ll~~~~~~~~~~d~~G~tpLh~A~~~~~--------------~~~d~~g~Tp 224 (507)
+..|..|+||||+||.. |+.++++.|++.++++ +.+|.+|+||||+|+..|+ +.+|.+|+||
T Consensus 163 ~~~~~~g~t~Lh~A~~~~~~~~~~~v~~Ll~~ga~i-n~~d~~g~TpLh~A~~~g~~~~v~~Ll~~gad~~~~d~~g~tp 241 (278)
T 1dcq_A 163 ANGHEPDETALHLAVRSVDRTSLHIVDFLVQNSGNL-DKQTGKGSTALHYCCLTDNAECLKLLLRGKASIEIANESGETP 241 (278)
T ss_dssp SSCSSTTCBHHHHHHHHCCTTTHHHHHHHHHHCSCT-TCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCH
T ss_pred cccccCCCCcchHHHHhcccchHHHHHHHHHCCCCc-cccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCccCCCCCH
Confidence 34477899999999999 9999999999999997 8999999999999999988 7899999999
Q ss_pred cchhhhcCCHHHHHHHHhhC
Q 039657 225 MLIAARMGVTEMVEQILDTF 244 (507)
Q Consensus 225 LH~Aa~~g~~~iv~~Ll~~~ 244 (507)
||+|+..|+.++|++|++++
T Consensus 242 L~~A~~~~~~~~v~~Ll~~g 261 (278)
T 1dcq_A 242 LDIAKRLKHEHCEELLTQAL 261 (278)
T ss_dssp HHHHHHTTCHHHHHHHHHHH
T ss_pred HHHHHHcCCHHHHHHHHHcC
Confidence 99999999999776666653
No 111
>3lvq_E ARF-GAP with SH3 domain, ANK repeat and PH domain containing protein 3, ADP-ribosylation...; GDP, ASAP3, UPLC1, linkers, alternat splicing; HET: GDP; 3.38A {Homo sapiens} PDB: 3lvr_E*
Probab=99.48 E-value=6e-14 Score=149.81 Aligned_cols=81 Identities=14% Similarity=0.059 Sum_probs=73.3
Q ss_pred CCCCChHHHHHHH---cCCHHHHHHHhhhCCcccccccCCCCcHHHHHHHcCC--------------cccCCCCCCccch
Q 039657 165 TEKMDNKILLAAK---IGVTEMVDRFLKSYPAVIQELNTSEKNLVLLTFEKKN--------------AQQSGRKETPMLI 227 (507)
Q Consensus 165 d~~g~TpLh~Aa~---~G~~~~v~~Ll~~~~~~~~~~d~~G~tpLh~A~~~~~--------------~~~d~~g~TpLH~ 227 (507)
|..|+||||+||. .|+.++|+.|++.++++ +.+|.+|+||||+|+..|+ +.+|.+|+||||+
T Consensus 168 ~~~g~t~Lh~A~~~a~~g~~~~v~~Ll~~ga~v-n~~d~~g~TpLh~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~tpl~~ 246 (497)
T 3lvq_E 168 QAPEELVLHLAVKVANQASLPLVDFIIQNGGHL-DAKAADGNTALHYAALYNQPDCLKLLLKGRALVGTVNEAGETALDI 246 (497)
T ss_dssp CCSCBCHHHHHHHTCCTTTHHHHHHHHHHSCCT-TCCCSSSCCHHHHHTTTTCHHHHHHHHHTCCCCSCCCTTCCCHHHH
T ss_pred ccccchHHHHHHHhcccccHHHHHHHHHcCCCC-CccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHH
Confidence 5679999999966 99999999999999997 8999999999999999988 7899999999999
Q ss_pred hhhcCCHHHHHHHHhhCCc
Q 039657 228 AARMGVTEMVEQILDTFPA 246 (507)
Q Consensus 228 Aa~~g~~~iv~~Ll~~~~~ 246 (507)
|+..|+.+++++|++++++
T Consensus 247 A~~~~~~~~~~~Ll~~ga~ 265 (497)
T 3lvq_E 247 ARKKHHKECEELLEQAQAG 265 (497)
T ss_dssp HHHTTCHHHHHHHHHTCC-
T ss_pred HHHcCCHHHHHHHHHhCCC
Confidence 9999999977777776554
No 112
>2aja_A Ankyrin repeat family protein; NESG, Q5ZSV0, structural genomics, PSI, protein structure initiative; 2.80A {Legionella pneumophila} SCOP: a.118.24.1
Probab=99.44 E-value=3.6e-15 Score=153.64 Aligned_cols=106 Identities=17% Similarity=0.175 Sum_probs=82.8
Q ss_pred CCCCChHHHHHHHcCCHHHHHHHhhhCCcc--cccccCCCCcHHHHHHHcCC----------c-------ccCCCCCCcc
Q 039657 165 TEKMDNKILLAAKIGVTEMVDRFLKSYPAV--IQELNTSEKNLVLLTFEKKN----------A-------QQSGRKETPM 225 (507)
Q Consensus 165 d~~g~TpLh~Aa~~G~~~~v~~Ll~~~~~~--~~~~d~~G~tpLh~A~~~~~----------~-------~~d~~g~TpL 225 (507)
+.+++||||+||+.|+.++|+.|++.++.. ....|..|+||||+||..|+ . ..+.+ +|||
T Consensus 89 g~~~~T~Lh~Aa~~G~~e~v~~Ll~~ga~~~~~~~~~~~~~tpL~~Aa~~G~~eiv~~Ll~~gad~~~~~i~~~~-~TpL 167 (376)
T 2aja_A 89 GIKSEVICFVAAITGCSSALDTLCLLLTSDEIVKVIQAENYQAFRLAAENGHLHVLNRLCELAPTEIMAMIQAEN-YHAF 167 (376)
T ss_dssp TCCHHHHHHHHHHHCCHHHHHHHTTC--CCSSCC--CHHHHHHHHHHHHTTCHHHHHHHHHSCTTTHHHHHSHHH-HHHH
T ss_pred CCCcCCHHHHHHHcCCHHHHHHHHHcCCcHHHHHHhccCCCCHHHHHHHcCCHHHHHHHHhCCCCccccccCCCC-CCHH
Confidence 445779999999999999999999998621 12456678899999999998 1 11223 8999
Q ss_pred chhhhcCCHHHHHHHHhhCCchHHHHHHHhccccccccccc--ccCCCCcHHHHHH-hcCCCcccc
Q 039657 226 LIAARMGVTEMVEQILDTFPANQYLQALLNRKILGESIFRQ--VDSQGNSALHLAA-KFGDHRPWL 288 (507)
Q Consensus 226 H~Aa~~g~~~iv~~Ll~~~~~~~vv~~Ll~~~~~~~~~in~--~D~~GnTpLHlAa-~~g~~~~v~ 288 (507)
|+||.+|+.++|++|++++++ ++. +|.+|+||||+|+ ..|+.++++
T Consensus 168 h~Aa~~G~~eiv~~Ll~~ga~-----------------~~~~~~d~~g~TpL~~Aa~~~G~~eiv~ 216 (376)
T 2aja_A 168 RLAAENGHLHVLNRLCELAPT-----------------EATAMIQAENYYAFRWAAVGRGHHNVIN 216 (376)
T ss_dssp HHHHHTTCHHHHHHHHHSCGG-----------------GHHHHHHHHHHHHHHHHHSTTCCHHHHH
T ss_pred HHHHHCCCHHHHHHHHHcCCc-----------------cchhccCCCCCCHHHHHHHHCCCHHHHH
Confidence 999999999977777766554 454 7888999999999 999988764
No 113
>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli}
Probab=99.43 E-value=7.2e-14 Score=118.07 Aligned_cols=95 Identities=19% Similarity=0.142 Sum_probs=74.3
Q ss_pred cccCCCCcHHHHHHHcCC--------------cccCCCCCCccchhhhcCCHHHHHHHHhhCCchHHHHHHHhccccccc
Q 039657 197 ELNTSEKNLVLLTFEKKN--------------AQQSGRKETPMLIAARMGVTEMVEQILDTFPANQYLQALLNRKILGES 262 (507)
Q Consensus 197 ~~d~~G~tpLh~A~~~~~--------------~~~d~~g~TpLH~Aa~~g~~~iv~~Ll~~~~~~~vv~~Ll~~~~~~~~ 262 (507)
.+|.+|+||||+|+..++ +.+|..|+||||+|+..|+.+++++|+++ + +
T Consensus 4 ~~d~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~d~~g~t~L~~A~~~~~~~~~~~Ll~~-------------g----~ 66 (115)
T 2l6b_A 4 WGSKDGNTPLHNAAKNGHAEEVKKLLSKGADVNARSKDGNTPLHLAAKNGHAEIVKLLLAK-------------G----A 66 (115)
T ss_dssp CCSCSSCCHHHHHHHHTCHHHHHHHTTTTCCSSCCCSSSCCTTHHHHTTTCHHHHHHHTTT-------------T----C
T ss_pred ccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHc-------------C----C
Confidence 478999999999999887 67899999999999999999966665554 3 4
Q ss_pred ccccccCCCCcHHHHHHhcCCCcccccCchhhhhHHHHHHhhhhhccCCccccccccCCCCCcc
Q 039657 263 IFRQVDSQGNSALHLAAKFGDHRPWLLPGAALQMQWEIKWYQFVKKSMPRHFFTRFNDNGKTPK 326 (507)
Q Consensus 263 ~in~~D~~GnTpLHlAa~~g~~~~v~~~gaal~~~~el~w~~~v~~~~~~~~~~~~N~~G~Tpl 326 (507)
.++.+|..|+||||+|+..|+.+++++ + ++ ...+++.++..|.||.
T Consensus 67 ~~~~~d~~g~tpl~~A~~~~~~~~~~~-------------L--l~---~ga~~n~~~~~~~~~~ 112 (115)
T 2l6b_A 67 DVNARSKDGNTPEHLAKKNGHHEIVKL-------------L--DA---KGADVNARSWGSSHHH 112 (115)
T ss_dssp CTTCCCTTCCCTTHHHHTTTCHHHHHH-------------H--HT---TSSSHHHHSCCCC---
T ss_pred CCcccCCCCCCHHHHHHHCCCHHHHHH-------------H--HH---cCCCCCcCCccccccc
Confidence 578999999999999999998776531 0 11 2345678888888874
No 114
>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A
Probab=99.36 E-value=1.1e-12 Score=110.40 Aligned_cols=58 Identities=21% Similarity=0.231 Sum_probs=47.1
Q ss_pred cCCCCCChHHHHHHHcCCHHHHHHHhhhCCcccccccCCCCcHHHHHHHcCCcccCCCCCCccchhhhcCCHHHHHHH
Q 039657 163 SGTEKMDNKILLAAKIGVTEMVDRFLKSYPAVIQELNTSEKNLVLLTFEKKNAQQSGRKETPMLIAARMGVTEMVEQI 240 (507)
Q Consensus 163 ~~d~~g~TpLh~Aa~~G~~~~v~~Ll~~~~~~~~~~d~~G~tpLh~A~~~~~~~~d~~g~TpLH~Aa~~g~~~iv~~L 240 (507)
.+|..|+||||+||..|+.++++.|++.++++ +.+|.+|+|| ||+|+.+|+.+++++|
T Consensus 52 ~~d~~g~tpLh~A~~~~~~~~v~~Ll~~ga~~-~~~d~~g~tp-------------------l~~A~~~~~~~~~~~L 109 (110)
T 2zgd_A 52 AKDKNGSTPLHLAARNGHLEVVKLLLEAGADV-XAQDKFGKTA-------------------FDISIDNGNEDLAEIL 109 (110)
T ss_dssp CCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTSCCH-------------------HHHHHHHTCHHHHHHH
T ss_pred ccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCc-cccccCCCcH-------------------HHHHHHcCCHHHHHHh
Confidence 34667999999999999999999999999987 5555555555 5559999999977765
No 115
>1vry_A Glycine receptor alpha-1 chain; second transmembrane domain, third transmembrane domain, membrane protein; NMR {Homo sapiens} SCOP: j.35.1.1
Probab=30.42 E-value=70 Score=24.15 Aligned_cols=40 Identities=28% Similarity=0.257 Sum_probs=28.8
Q ss_pred HHHhchheecCCcchhhhHHHHHHHHHHHHHHHhHhhHHH
Q 039657 448 FCSGHSFMLKDEMRSAAYPIYAATCLPMTFFALAQLPLYF 487 (507)
Q Consensus 448 F~~g~~~~l~~~~~~~~~~v~~~~~~~~~~~~~~~~p~~~ 487 (507)
..++.-.-+|......++-++.++|...+|.+++.+-.--
T Consensus 18 ~~~~~~~~lPkVSYikAiDvw~~~C~~FVF~aLlEya~V~ 57 (76)
T 1vry_A 18 QSSGSRASLPKVSYVKAIDIWLAVCLLFVFSALLEYAAVN 57 (76)
T ss_dssp HHHCTTTCCCSHHHHHHHHHTHHHHHHHHHHHHHHHHHHH
T ss_pred HhcCcccCCCCccchHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4445555677767778888888899888888887765533
No 116
>4ev6_A Magnesium transport protein CORA; membrane protein, ION transporter, metal TR; HET: UMQ; 3.20A {Methanocaldococcus jannaschii}
Probab=28.80 E-value=62 Score=31.56 Aligned_cols=21 Identities=10% Similarity=-0.016 Sum_probs=17.2
Q ss_pred HHHHHHHHHHHHHHHHhchhe
Q 039657 435 TTLFTSIAAILISFCSGHSFM 455 (507)
Q Consensus 435 ~~l~~si~~m~~aF~~g~~~~ 455 (507)
.+..++++.+..+|++|+|=+
T Consensus 281 ~LTiit~IflP~T~IaGiyGM 301 (339)
T 4ev6_A 281 ILTMVTTIFAVPMWITGIYGM 301 (339)
T ss_dssp HHHHHHHHSSHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHHHHhhccC
Confidence 466678888899999999966
No 117
>2iub_A CORA, divalent cation transport-related protein; membrane protein, ION transporter; 2.9A {Thermotoga maritima} SCOP: d.328.1.1 f.17.3.1 PDB: 2hn2_A 2bbj_A
Probab=27.06 E-value=51 Score=32.57 Aligned_cols=21 Identities=14% Similarity=0.134 Sum_probs=17.1
Q ss_pred HHHHHHHHHHHHHHHHhchhe
Q 039657 435 TTLFTSIAAILISFCSGHSFM 455 (507)
Q Consensus 435 ~~l~~si~~m~~aF~~g~~~~ 455 (507)
.+..++++.|..+|++|+|=+
T Consensus 305 ~LTiit~IflP~T~IaGiyGM 325 (363)
T 2iub_A 305 VLTIIATIFMPLTFIAGIYGM 325 (363)
T ss_dssp HHHHHHHHHHHHHHHTTSCC-
T ss_pred HHHHHHHHHHHHHHHHhhhcc
Confidence 466788889999999999865
No 118
>3rko_J NADH-quinone oxidoreductase subunit J; complex I, proton pump, membrane protein, Na ubiquinone, cytoplasmic membrane; HET: LFA CA7; 3.00A {Escherichia coli}
Probab=20.88 E-value=2.5e+02 Score=24.81 Aligned_cols=23 Identities=17% Similarity=0.258 Sum_probs=13.9
Q ss_pred HHHHHHHHHHHHHHHHHHhchhe
Q 039657 433 GLTTLFTSIAAILISFCSGHSFM 455 (507)
Q Consensus 433 ~~~~l~~si~~m~~aF~~g~~~~ 455 (507)
|+....+.++++++=|.+.+.++
T Consensus 52 a~~qilVYvGAi~VLflFvvMl~ 74 (184)
T 3rko_J 52 GALEIIVYAGAIMVLFVFVVMML 74 (184)
T ss_dssp HHHHHHTHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHc
Confidence 44455566666666666666555
No 119
>3tlw_A GLR4197 protein, GLIC; Cys-loop receptor family, membrane protein, transport protei; HET: LMT; 2.60A {Gloeobacter violaceus} PDB: 3uu4_A* 3uub_A* 3tlv_A* 3uu6_A* 3uu5_A* 3uu3_A* 3tlu_A* 3uu8_A* 3tls_A* 3tlt_A* 3p4w_A* 3p50_A* 3eam_A* 4f8h_A* 2xq4_A 2xq5_A 2xq6_A 2xq3_A 2xq8_A 2xqa_A ...
Probab=20.14 E-value=5.5e+02 Score=24.21 Aligned_cols=13 Identities=8% Similarity=0.087 Sum_probs=5.0
Q ss_pred HHHHHhhhhhccc
Q 039657 355 AALIATVAFATSA 367 (507)
Q Consensus 355 a~LiATv~Faa~~ 367 (507)
+.++..++...-+
T Consensus 209 ~~li~~ls~~sF~ 221 (321)
T 3tlw_A 209 MLFILFISWTAFW 221 (321)
T ss_dssp HHHHHHHHGGGGG
T ss_pred HHHHHHHhheeec
Confidence 3344334433333
Done!