BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 039658
(198 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|351727341|ref|NP_001238437.1| uncharacterized protein LOC100527339 [Glycine max]
gi|255632121|gb|ACU16413.1| unknown [Glycine max]
Length = 208
Score = 69.7 bits (169), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 95/198 (47%), Gaps = 15/198 (7%)
Query: 3 IYELEIKDVKFKVSVIDDADVIDKKISELSGMLFKMRRVVGFDVKFNS----QTRIAEML 58
+Y + + + ++ D + ++DK I +S +R+VG D ++ + + ++A +L
Sbjct: 19 MYLVSCDGLTIETTITDKSGIVDKWIQVVSSTYAGKQRIVGLDTEWTTAKKPKMKVA-IL 77
Query: 59 ILSAANLCLAIQLCRLSRIPESVTNFLADRTICFVGFGVDKKTASIHGKTGYPRNCDTGI 118
L N CL IQL + IP+S+ +FL D FVG GV + K Y C+ GI
Sbjct: 78 QLCIENKCLIIQLFHMDNIPQSLRSFLMDSNFEFVGVGVINDLRML--KNDYGLECNKGI 135
Query: 119 DLGHLAARVLKKPKLIGLTGIAELAKE-VGIDHNSLSNKEIEAVTPPNWNAWVFTDKQVL 177
D+ LA K P I + LAKE VG++ ++ +AV W + T Q+
Sbjct: 136 DVSLLAKE--KWPHRISSGALKYLAKELVGLEM-----EKSKAVCTSEWQSKELTQTQIE 188
Query: 178 HAVEEARGCYIVADKLLS 195
+A +A + + +L+
Sbjct: 189 YACIDAYASFKIGKMILN 206
>gi|225450557|ref|XP_002277523.1| PREDICTED: Werner Syndrome-like exonuclease-like [Vitis vinifera]
Length = 210
Score = 69.3 bits (168), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 53/186 (28%), Positives = 89/186 (47%), Gaps = 13/186 (6%)
Query: 14 KVSVIDDADVIDKKISELSGMLFKMRRVVGFDVKFN-----SQTRIAEMLILSAANLCLA 68
+ ++ D A + D+ + E+ + VVG D+++ S + + L L + CL
Sbjct: 30 ETTLTDKAAIADEWVREILSIHAGKPMVVGLDIEWRPHPIRSMSNKSATLQLCIDDKCLI 89
Query: 69 IQLCRLSRIPESVTNFLADRTICFVGFGVDKKTASIHGKTGYPRNCDTGIDLGHLAARVL 128
+QL + IPES+ +FLAD FVG V A + K Y +C D+ LA +
Sbjct: 90 LQLFYMDEIPESLKSFLADSNFTFVGIEVGDDIAKL--KNEYGLDCSRSADIRDLAMQ-- 145
Query: 129 KKPKLIGLTGIAELAKEVGIDHNSLSNKEIEAVTPPNWNAWVFTDKQVLHAVEEARGCYI 188
+ P G+ +LA EV +L K+ + V+ NW A V ++ Q+ +A +A Y
Sbjct: 146 RWPGRFRRPGLKDLAWEV----TNLPMKKPKHVSMSNWEARVLSENQIEYACIDAYASYK 201
Query: 189 VADKLL 194
+ KL+
Sbjct: 202 IGHKLI 207
>gi|116793719|gb|ABK26855.1| unknown [Picea sitchensis]
Length = 204
Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 55/199 (27%), Positives = 98/199 (49%), Gaps = 17/199 (8%)
Query: 5 ELEIKDVKFKVSVIDDADVIDKKISELSGMLFKMRRVVGFDVKFN-SQTRIAE----MLI 59
E+ + + +V DD V++ +++ +G + +VGFD+++ S R E +L
Sbjct: 18 EVHFAEKSIQTTVTDDGHVVENWVNQQTG-----QEIVGFDMEWRPSFQRGWENDTALLQ 72
Query: 60 LSAANLCLAIQLCRLSRIPESVTNFLADRTICFVGFGVDKKTASIHGKTGYPRNCDTGID 119
L N CL IQ+ L IPE++ +FL D + VG G+++ A + G C ++
Sbjct: 73 LCTDNGCLIIQMLFLDFIPEALVSFLKDPGVKLVGVGIERDAAKLMNDHGL--ECGGQVE 130
Query: 120 LGHLAARVLKKPKLIGLTGIAELAKEVGIDHNSLSNKEIEAVTPPNWNAWVFTDKQVLHA 179
LG LAA L++ +L G+ LAKEV L + ++++ NW + +Q+ +A
Sbjct: 131 LGALAAEKLERREL-KQAGLKGLAKEV----LGLRLSKPKSISMSNWAWAILQHRQIQYA 185
Query: 180 VEEARGCYIVADKLLSLLN 198
+A + KL+ N
Sbjct: 186 CIDAFVSLAIGKKLMESEN 204
>gi|225450559|ref|XP_002277541.1| PREDICTED: Werner Syndrome-like exonuclease-like [Vitis vinifera]
Length = 208
Score = 63.9 bits (154), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 86/197 (43%), Gaps = 15/197 (7%)
Query: 4 YELEIKDVKFKVSVIDDADVIDKKISELSGMLFKMRRVVGFDVKFNSQTRIAEM------ 57
Y + + ++ D A ++D+ + E+ + VVG D+++ RI M
Sbjct: 17 YSVNFAGKTIETTLTDKAAIVDEWVQEILSIYAGKPMVVGLDIEWRP-NRIPSMSNKSAT 75
Query: 58 LILSAANLCLAIQLCRLSRIPESVTNFLADRTICFVGFGVDKKTASIHGKTGYPRNCDTG 117
L L N CL +QL + IP+S+ FL D FVG V + K Y C
Sbjct: 76 LQLCINNKCLILQLFYMDEIPQSLKGFLLDSNFTFVGVEVGADIDKL--KNEYGLECSCS 133
Query: 118 IDLGHLAARVLKKPKLIGLTGIAELAKEVGIDHNSLSNKEIEAVTPPNWNAWVFTDKQVL 177
D+ LA + + P G+ +LA EV +L K+ + V NW A V + QV
Sbjct: 134 ADVRILAMQ--RWPGRFRRPGLKDLAWEVV----NLRMKKPKHVCMSNWEARVLNENQVE 187
Query: 178 HAVEEARGCYIVADKLL 194
+A +A Y + KL+
Sbjct: 188 YACIDAYASYRIGHKLI 204
>gi|147818277|emb|CAN64722.1| hypothetical protein VITISV_026723 [Vitis vinifera]
Length = 219
Score = 63.5 bits (153), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 86/197 (43%), Gaps = 15/197 (7%)
Query: 4 YELEIKDVKFKVSVIDDADVIDKKISELSGMLFKMRRVVGFDVKFNSQTRIAEM------ 57
Y + + ++ D A ++D+ + E+ + VVG D+++ RI M
Sbjct: 28 YSVNFAGKTIETTLTDKAAIVDEWVQEILSIYAGKPMVVGLDIEWRPN-RIPSMSNKSAT 86
Query: 58 LILSAANLCLAIQLCRLSRIPESVTNFLADRTICFVGFGVDKKTASIHGKTGYPRNCDTG 117
L L N CL +QL + IP+S+ FL D FVG V + K Y C
Sbjct: 87 LQLCINNKCLILQLFYMDEIPQSLKGFLLDSNFTFVGVEVGADIDKL--KNEYGLECSCS 144
Query: 118 IDLGHLAARVLKKPKLIGLTGIAELAKEVGIDHNSLSNKEIEAVTPPNWNAWVFTDKQVL 177
D+ LA + + P G+ +LA EV +L K+ + V NW A V + QV
Sbjct: 145 ADVRILAMQ--RWPGRFRRPGLKDLAWEVV----NLRMKKPKHVCMSNWEARVLNENQVD 198
Query: 178 HAVEEARGCYIVADKLL 194
+A +A Y + KL+
Sbjct: 199 YACIDAYASYRIGHKLI 215
>gi|125527632|gb|EAY75746.1| hypothetical protein OsI_03659 [Oryza sativa Indica Group]
Length = 208
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 89/200 (44%), Gaps = 20/200 (10%)
Query: 4 YELEIKDVKFKVSVIDDADVIDKKISELSGMLFKMRR----VVGFDVKFNSQTRI----- 54
Y + + +V D +D + E+ + RR VVG DV++ T
Sbjct: 14 YTVAFDEDYIHTTVTYSGDDVDDWLDEI--LRIHRRRLNYLVVGLDVEWRPATYYHGPGP 71
Query: 55 AEMLILSAANLCLAIQLCRLSRIPESVTNFLADRTICFVGFGVDKKTASIHGKTGYPRNC 114
+L + CL Q+ +P+S+ +FLAD FVG G+ A + ++ +
Sbjct: 72 VAVLQICVGRRCLIFQILHADYVPDSLFDFLADGRFTFVGVGIHDDVAKL--RSHHELEV 129
Query: 115 DTGIDLGHLAARVLKKPKLIGLTGIAELAKEV-GIDHNSLSNKEIEAVTPPNWNAWVFTD 173
+ +DL +LAA+ + KP L G+ L +EV G+ + + A W++W T
Sbjct: 130 ENAVDLRYLAAQTIGKPALRS-AGLQGLVREVMGVWAPKPYHVRVSA-----WDSWNLTP 183
Query: 174 KQVLHAVEEARGCYIVADKL 193
+QV++A +A + V L
Sbjct: 184 EQVMYACADAFASFEVGRSL 203
>gi|168037523|ref|XP_001771253.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162677494|gb|EDQ63964.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 188
Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/164 (30%), Positives = 77/164 (46%), Gaps = 12/164 (7%)
Query: 37 KMRRVVGFDVKFNSQTRIA-----EMLILSAANLCLAIQLCRLSRIPESVTNFLADRTIC 91
++ +V G D ++ R +L + + CL +Q+ L IP + NFL D +I
Sbjct: 32 QIGKVFGLDAEWRPSFRKGVEHKIALLQICGEDDCLIVQMLYLDSIPTELVNFLKDPSIK 91
Query: 92 FVGFGVDKKTASIHGKTGYPRNCDTGIDLGHLAARVLKKPKLIGLTGIAELAKEVGIDHN 151
F G G+ K ++ K + C+ IDL LAA VL +P+L G+ LAK V +D++
Sbjct: 92 FPGVGI--KGDALKLKRDWGLECNGAIDLTTLAASVLGRPELKA-AGLKSLAKVV-MDYD 147
Query: 152 SLSNKEIEAVTPPNWNAWVFTDKQVLHAVEEARGCYIVADKLLS 195
K VT NW + QV +A +A Y + KL
Sbjct: 148 MAKPKR---VTMSNWAKPILDKVQVEYASLDAWVSYAIHQKLFQ 188
>gi|357442197|ref|XP_003591376.1| Werner syndrome ATP-dependent helicase [Medicago truncatula]
gi|355480424|gb|AES61627.1| Werner syndrome ATP-dependent helicase [Medicago truncatula]
Length = 179
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/151 (31%), Positives = 70/151 (46%), Gaps = 15/151 (9%)
Query: 8 IKDVKFKVSVIDDADVIDKKI-SELSGMLFKMRRVVGFDVKFNS-QTRIAE--------- 56
+ V K +V + +D + S L + +V+GFDV+ + + +++E
Sbjct: 9 LNGVHIKTTVTNKQQEVDNLLWSFLRPANYNGPKVIGFDVELSMFENKVSEEEIYDNSEC 68
Query: 57 -MLILSAANLCLAIQLCRLSRIPESVTNFLADRTICFVGFGVDKKTASIHGKTGYPRNCD 115
L L LCL IQLC L +P S+ NFL FV G+ A + K Y C
Sbjct: 69 ATLHLCNGQLCLIIQLCHLDSVPTSLLNFLRLPDYTFVSVGIKDDLAKL--KKEYGIRCR 126
Query: 116 TGIDLGHLAARVLKKPKLIGLTGIAELAKEV 146
++LG LAA VLK P+L G+ EL V
Sbjct: 127 NAVELGPLAASVLKVPRL-AFCGVDELTVAV 156
>gi|297597576|ref|NP_001044181.2| Os01g0737600 [Oryza sativa Japonica Group]
gi|57900569|dbj|BAD87021.1| hypothetical protein [Oryza sativa Japonica Group]
gi|125571949|gb|EAZ13464.1| hypothetical protein OsJ_03381 [Oryza sativa Japonica Group]
gi|255673665|dbj|BAF06095.2| Os01g0737600 [Oryza sativa Japonica Group]
Length = 208
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 87/200 (43%), Gaps = 20/200 (10%)
Query: 4 YELEIKDVKFKVSVIDDADVIDKKISELSGMLFKMRR----VVGFDVKFNSQTRI----- 54
Y + + +V D +D + E+ + RR VVG DV++ T
Sbjct: 14 YTVAFDEDYIHTTVTYSGDDVDDWLDEI--LRIHRRRLNYLVVGLDVEWRPATYYHGPGP 71
Query: 55 AEMLILSAANLCLAIQLCRLSRIPESVTNFLADRTICFVGFGVDKKTASIHGKTGYPRNC 114
+L + CL Q+ +P+S+ +FLAD FVG G+ A + G
Sbjct: 72 VAVLQICVGRRCLIFQILHADYVPDSLFDFLADGRFTFVGVGIHDDVAKLRSHHGL--EV 129
Query: 115 DTGIDLGHLAARVLKKPKLIGLTGIAELAKEV-GIDHNSLSNKEIEAVTPPNWNAWVFTD 173
+ +DL +LAA+ + KP L G+ L +EV G+ + + A W++W T
Sbjct: 130 ENVVDLRYLAAQTIGKPALRS-AGLQGLVREVMGVWAPKPYHVRVSA-----WDSWNLTP 183
Query: 174 KQVLHAVEEARGCYIVADKL 193
+QV++A +A + V L
Sbjct: 184 EQVMYACADAFASFEVGRSL 203
>gi|242054353|ref|XP_002456322.1| hypothetical protein SORBIDRAFT_03g033970 [Sorghum bicolor]
gi|241928297|gb|EES01442.1| hypothetical protein SORBIDRAFT_03g033970 [Sorghum bicolor]
Length = 208
Score = 59.3 bits (142), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 74/161 (45%), Gaps = 15/161 (9%)
Query: 41 VVGFDVKFNSQTRIAE------MLILSAANLCLAIQLCRLSRIPESVTNFLADRTICFVG 94
+VG DV++ +L + CL ++ +P+S+++FLAD+ FVG
Sbjct: 52 IVGIDVEWRPSRTTTNHVPPVALLQICVGRRCLVFKILHADYVPQSLSDFLADQRFAFVG 111
Query: 95 FGVDKKTASIHGKTGYPRNCDTGIDLGHLAARVLKKPKLIGLTGIAELAKEV-GIDHNSL 153
GV A + ++GY +DL LAA L+KP L G G+ L EV G++
Sbjct: 112 VGVRDDAAKL--RSGYGLKVGRMVDLRTLAATKLRKPALRG-AGLQALVSEVMGVEMEKP 168
Query: 154 SNKEIEAVTPPNWNAWVFTDKQVLHAVEEARGCYIVADKLL 194
+ + A W+A T Q+ +A +A + V +L
Sbjct: 169 HHVRVSA-----WDAPKLTYDQLKYACADAFASFEVGRRLF 204
>gi|242054351|ref|XP_002456321.1| hypothetical protein SORBIDRAFT_03g033960 [Sorghum bicolor]
gi|241928296|gb|EES01441.1| hypothetical protein SORBIDRAFT_03g033960 [Sorghum bicolor]
Length = 210
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/159 (27%), Positives = 71/159 (44%), Gaps = 12/159 (7%)
Query: 41 VVGFDVKFNSQTRIA---EMLILSAANLCLAIQLCRLSRIPESVTNFLADRTICFVGFGV 97
+VG DV++ + +L + CL Q+ R +P+++++FLADR FVG G+
Sbjct: 54 IVGLDVEWRPAAPVPGPVAVLQICVDRRCLVFQILRADYVPDALSDFLADRRFTFVGVGI 113
Query: 98 DKKTASIHGKTGYPRNCDTGIDLGHLAARVLKKPKLIGLTGIAELAKEV-GIDHNSLSNK 156
A + + GY +DL LAAR L KP L G+ L EV G+ +
Sbjct: 114 RDDAAKL--RDGYGLEVPRTVDLRRLAARTLGKPDL-RRAGLQRLVWEVLGVQMEKPHHV 170
Query: 157 EIEAVTPPNWNAWVFTDKQVLHAVEEARGCYIVADKLLS 195
+ A W+ + Q +A +A V +L +
Sbjct: 171 RVSA-----WDKRKLSKAQFKYACADAFASMEVGQELYT 204
>gi|413947987|gb|AFW80636.1| hypothetical protein ZEAMMB73_312807 [Zea mays]
Length = 214
Score = 57.4 bits (137), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 49/167 (29%), Positives = 76/167 (45%), Gaps = 19/167 (11%)
Query: 41 VVGFDVKFNSQTRI-----AEMLILSAANLCLAIQLCRLSRIPESVTNFLADRTICFVGF 95
+VG D ++ R +L L A + CL +QL + RIP S+ +FLAD + FVG
Sbjct: 58 IVGLDCEWKPNYRSWTTSKVAILQLCAGDRCLVLQLFYVDRIPASIRSFLADPDVFFVGI 117
Query: 96 GVDKKTASIHGKTGYPRNCDTGIDLGHLAARVL----KKPKLIGLTGIAELAKEVGIDHN 151
GV + A + T Y C + ++L L P+L G+ A+EV
Sbjct: 118 GVGEDAAKL--ATDYGLTCASPVELESRCNDYLGYYTGGPRL----GLKGYAREV----L 167
Query: 152 SLSNKEIEAVTPPNWNAWVFTDKQVLHAVEEARGCYIVADKLLSLLN 198
L ++ VT NW D Q+ +A +A Y + +K+L L +
Sbjct: 168 GLVMEKPRGVTMSNWEKHDLEDAQIRYACIDAYVSYKLGEKVLVLTD 214
>gi|242058237|ref|XP_002458264.1| hypothetical protein SORBIDRAFT_03g030190 [Sorghum bicolor]
gi|241930239|gb|EES03384.1| hypothetical protein SORBIDRAFT_03g030190 [Sorghum bicolor]
Length = 202
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 86/203 (42%), Gaps = 21/203 (10%)
Query: 3 IYELEIKDVKFKVSVIDDADVIDKKISEL------SGMLFKMRRVVGFDVKFNSQTRIAE 56
+ E+ + +V +D+ I+E+ G+ + + VG DV++ R +
Sbjct: 6 VTEVTFGNDVITTTVTSSGQAVDRWIAEILSVHRPGGVGYNI--TVGLDVEWRPSYRSYQ 63
Query: 57 ----MLILSAANLCLAIQLCRLSRIPESVTNFLADRTICFVGFGVDKKTASIHGKTGYPR 112
L L CL QL +P ++ FL DR ICF G GV + G
Sbjct: 64 NPVATLQLCVGRSCLIFQLLHADYVPGALAEFLGDRGICFFGVGVAADAERLSDDHGL-- 121
Query: 113 NCDTGIDLGHLAARVLKKPKLIGLTGIAELAKEV-GIDHNSLSNKEIEAVTPPNWNAWVF 171
+DL AA + +P L G+ L + V G+D + + VT W+A+
Sbjct: 122 QVANAVDLRGRAAECMNRPDL-RQAGLRALVQAVMGVDL-----AKPQRVTMSRWDAYCL 175
Query: 172 TDKQVLHAVEEARGCYIVADKLL 194
+ +Q+ +A +A + +A +LL
Sbjct: 176 SHEQIRYACVDAFVSFEIARRLL 198
>gi|297597578|ref|NP_001044182.2| Os01g0737700 [Oryza sativa Japonica Group]
gi|255673666|dbj|BAF06096.2| Os01g0737700 [Oryza sativa Japonica Group]
Length = 233
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/199 (23%), Positives = 86/199 (43%), Gaps = 18/199 (9%)
Query: 4 YELEIKDVKFKVSVIDDADVIDKKISELSGMLFKMRR----VVGFDVKFNSQTRIAEM-- 57
Y + + K +V D + +++ + E+ + RR +VG DV++N + +
Sbjct: 39 YTVAFDEDKIYTTVTDSGEEVEEWLDEI--VRIHHRRLDHLIVGLDVEWNPASGFCALGP 96
Query: 58 ---LILSAANLCLAIQLCRLSRIPESVTNFLADRTICFVGFGVDKKTASIHGKTGYPRNC 114
L + CL Q+ +P+ + +FL D FVG G+ + + Y
Sbjct: 97 VAVLQICVGRRCLVFQIIHADYVPDQLGDFLGDGRFTFVGVGIHDDVDKL--REHYDLEV 154
Query: 115 DTGIDLGHLAARVLKKPKLIGLTGIAELAKEVGIDHNSLSNKEIEAVTPPNWNAWVFTDK 174
+ +DL +LAA+ + KP L TG+ L EV + ++ V W++ T
Sbjct: 155 ENAVDLRYLAAQTIGKPALRS-TGLQGLVWEV----MDVWMEKPHHVRVSAWDSRQLTLD 209
Query: 175 QVLHAVEEARGCYIVADKL 193
QV++A +A + V L
Sbjct: 210 QVMYACADAFASFEVGRSL 228
>gi|125527633|gb|EAY75747.1| hypothetical protein OsI_03660 [Oryza sativa Indica Group]
Length = 208
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/199 (23%), Positives = 85/199 (42%), Gaps = 18/199 (9%)
Query: 4 YELEIKDVKFKVSVIDDADVIDKKISELSGMLFKMRR----VVGFDVKFNSQTRI----- 54
Y + + K +V D + ++ + E+ + RR +VG DV++N +
Sbjct: 14 YTVAFDEDKIYTTVTDSGEEVEDWLDEI--VRIHHRRLDHLIVGLDVEWNPASGFCAPGP 71
Query: 55 AEMLILSAANLCLAIQLCRLSRIPESVTNFLADRTICFVGFGVDKKTASIHGKTGYPRNC 114
+L + CL Q+ +P+ + +FL D FVG G+ + + Y
Sbjct: 72 VAVLQICVGRRCLVFQIIHADYVPDQLGDFLGDGRFTFVGVGIHDDVDKL--REHYDLEV 129
Query: 115 DTGIDLGHLAARVLKKPKLIGLTGIAELAKEVGIDHNSLSNKEIEAVTPPNWNAWVFTDK 174
+ +DL +LAA+ + KP L TG+ L EV + ++ V W++ T
Sbjct: 130 ENAVDLRYLAAQTIGKPALRS-TGLQGLVWEV----MDVWMEKPHHVRVSAWDSRQLTLD 184
Query: 175 QVLHAVEEARGCYIVADKL 193
QV++A +A + V L
Sbjct: 185 QVMYACADAFASFEVGRSL 203
>gi|125571950|gb|EAZ13465.1| hypothetical protein OsJ_03382 [Oryza sativa Japonica Group]
Length = 287
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/199 (23%), Positives = 86/199 (43%), Gaps = 18/199 (9%)
Query: 4 YELEIKDVKFKVSVIDDADVIDKKISELSGMLFKMRR----VVGFDVKFNSQTRIAEM-- 57
Y + + K +V D + +++ + E+ + RR +VG DV++N + +
Sbjct: 93 YTVAFDEDKIYTTVTDSGEEVEEWLDEI--VRIHHRRLDHLIVGLDVEWNPASGFCALGP 150
Query: 58 ---LILSAANLCLAIQLCRLSRIPESVTNFLADRTICFVGFGVDKKTASIHGKTGYPRNC 114
L + CL Q+ +P+ + +FL D FVG G+ + + Y
Sbjct: 151 VAVLQICVGRRCLVFQIIHADYVPDQLGDFLGDGRFTFVGVGIHDDVDKL--REHYDLEV 208
Query: 115 DTGIDLGHLAARVLKKPKLIGLTGIAELAKEVGIDHNSLSNKEIEAVTPPNWNAWVFTDK 174
+ +DL +LAA+ + KP L TG+ L EV + ++ V W++ T
Sbjct: 209 ENAVDLRYLAAQTIGKPALRS-TGLQGLVWEV----MDVWMEKPHHVRVSAWDSRQLTLD 263
Query: 175 QVLHAVEEARGCYIVADKL 193
QV++A +A + V L
Sbjct: 264 QVMYACADAFASFEVGRSL 282
>gi|57900570|dbj|BAD87022.1| hypothetical protein [Oryza sativa Japonica Group]
Length = 327
Score = 54.3 bits (129), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 47/199 (23%), Positives = 86/199 (43%), Gaps = 18/199 (9%)
Query: 4 YELEIKDVKFKVSVIDDADVIDKKISELSGMLFKMRR----VVGFDVKFNSQTRIAEM-- 57
Y + + K +V D + +++ + E+ + RR +VG DV++N + +
Sbjct: 133 YTVAFDEDKIYTTVTDSGEEVEEWLDEI--VRIHHRRLDHLIVGLDVEWNPASGFCALGP 190
Query: 58 ---LILSAANLCLAIQLCRLSRIPESVTNFLADRTICFVGFGVDKKTASIHGKTGYPRNC 114
L + CL Q+ +P+ + +FL D FVG G+ + + Y
Sbjct: 191 VAVLQICVGRRCLVFQIIHADYVPDQLGDFLGDGRFTFVGVGIHDDVDKL--REHYDLEV 248
Query: 115 DTGIDLGHLAARVLKKPKLIGLTGIAELAKEVGIDHNSLSNKEIEAVTPPNWNAWVFTDK 174
+ +DL +LAA+ + KP L TG+ L EV + ++ V W++ T
Sbjct: 249 ENAVDLRYLAAQTIGKPALRS-TGLQGLVWEV----MDVWMEKPHHVRVSAWDSRQLTLD 303
Query: 175 QVLHAVEEARGCYIVADKL 193
QV++A +A + V L
Sbjct: 304 QVMYACADAFASFEVGRSL 322
>gi|224139642|ref|XP_002323207.1| predicted protein [Populus trichocarpa]
gi|222867837|gb|EEF04968.1| predicted protein [Populus trichocarpa]
Length = 215
Score = 53.9 bits (128), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 56/196 (28%), Positives = 87/196 (44%), Gaps = 25/196 (12%)
Query: 3 IYELEIKDVKFKVSVIDDADVIDKKISELSGMLFKMRR------VVGFDVKF--NSQTRI 54
+Y+++ D + V + ++ I+E L + +VG DV++ N RI
Sbjct: 17 LYDVKFFDDRIHTLVTHTSSFVNTWIAETQQKLLQNNNHAHRPLIVGLDVEWRPNRFRRI 76
Query: 55 AE---MLILSAANLCLAIQLCRL-SRIPESVTNFLADRTICFVGFGVDKKTASIHGKTGY 110
L LSA N CL QL + IP+S+ +FL+D T FVG G++ + Y
Sbjct: 77 ENPVATLQLSAGNDCLIFQLLHCPTGIPQSLHDFLSDMTYTFVGVGIEGDVKKL--TEDY 134
Query: 111 PRNCDTGIDLGHLAARVLKKPKLIGLTGIAELAKEVGIDHNSLSNKEIEA---VTPPNWN 167
+ +DL LAA L + +G+ LA+EV KEIE +T W+
Sbjct: 135 ELSVGNAVDLRGLAAEKLGDSRWKN-SGVKRLAREV-------LGKEIEKPKRITLSRWD 186
Query: 168 AWVFTDKQVLHAVEEA 183
T QV +A +A
Sbjct: 187 NPWLTPAQVQYACLDA 202
>gi|115457358|ref|NP_001052279.1| Os04g0225100 [Oryza sativa Japonica Group]
gi|38344132|emb|CAD39842.2| OSJNBb0072N21.11 [Oryza sativa Japonica Group]
gi|113563850|dbj|BAF14193.1| Os04g0225100 [Oryza sativa Japonica Group]
Length = 211
Score = 53.9 bits (128), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 46/179 (25%), Positives = 77/179 (43%), Gaps = 18/179 (10%)
Query: 27 KISELSGMLFKMRR------VVGFDVKFNSQTRIA---EMLILSAANLCLAIQLCRLSRI 77
K+ G +++ R VVG DV++ + +L L CL Q+ +
Sbjct: 35 KVESWLGETYRIHRSCGHPLVVGLDVEWRPAAPVPGPVAVLQLCVDRRCLVFQILHADYV 94
Query: 78 PESVTNFLADRTICFVGFGVDKKTASIHGKTGYPRNCDTGIDLGHLAARVLKKPKLIGLT 137
P++++ FLAD FVG GV A + + GY +DL LAA L +P L
Sbjct: 95 PDALSRFLADPRFTFVGVGVRDDAARL--RVGYGLEVPRAVDLRALAADTLGRPDLR-RA 151
Query: 138 GIAELAKEV-GIDHNSLSNKEIEAVTPPNWNAWVFTDKQVLHAVEEARGCYIVADKLLS 195
G+ L +EV G+ + + + A W+ ++ Q +A +A V +L +
Sbjct: 152 GLRALVREVMGVQMDKPHHVRVSA-----WDKRNLSEDQFKYACADAFASREVGRRLYT 205
>gi|226502476|ref|NP_001149685.1| Werner syndrome ATP-dependent helicase [Zea mays]
gi|195629436|gb|ACG36359.1| Werner syndrome ATP-dependent helicase [Zea mays]
gi|414880611|tpg|DAA57742.1| TPA: werner syndrome ATP-dependent helicase [Zea mays]
Length = 204
Score = 53.5 bits (127), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 37/129 (28%), Positives = 63/129 (48%), Gaps = 9/129 (6%)
Query: 66 CLAIQLCRLSRIPESVTNFLADRTICFVGFGVDKKTASIHGKTGYPRNCDTGIDLGHLAA 125
CL Q+ + IP++++ FLADR FVG G+ A + + GY + +DL LAA
Sbjct: 79 CLVFQILQADYIPDALSRFLADRRFTFVGVGISGDVAKL--RAGYRLGVASAVDLRVLAA 136
Query: 126 RVLKKPKLIGLTGIAELAKEV-GIDHNSLSNKEIEAVTPPNWNAWVFTDKQVLHAVEEAR 184
L+ P+L+ G+ L EV G+ + + A W+ ++ Q+ +A +A
Sbjct: 137 DTLEVPELL-RAGLQTLVWEVMGVQMVKPHHVRVSA-----WDTPTLSEDQLKYACADAF 190
Query: 185 GCYIVADKL 193
+ V +L
Sbjct: 191 ASFEVGRRL 199
>gi|224089887|ref|XP_002308852.1| predicted protein [Populus trichocarpa]
gi|222854828|gb|EEE92375.1| predicted protein [Populus trichocarpa]
Length = 215
Score = 53.1 bits (126), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 91/208 (43%), Gaps = 25/208 (12%)
Query: 3 IYELEIKDVKFKVSVIDDADVIDKKISELSGMLFKMRR------VVGFDVKFN-SQTRIA 55
+Y++ D K V ++ I+E L + +VG D+++ ++TR
Sbjct: 17 LYDVNFFDDKIHTLVTHTPSFVNTWIAETQQKLHQNNNPADHPLLVGLDIEWRPNRTRQI 76
Query: 56 E----MLILSAANLCLAIQLCRL-SRIPESVTNFLADRTICFVGFGVDKKTASIHGKTGY 110
E L LS CL QL + IP+S+ +FL+++ FVG G++ + GY
Sbjct: 77 ENPVATLQLSTGKDCLIFQLLHCPTGIPQSLYDFLSNKNYTFVGVGIEGDVEKL--VEGY 134
Query: 111 PRNCDTGIDLGHLAARVLKKPKLIGLTGIAELAKEVGIDHNSLSNKEIEA---VTPPNWN 167
+ +DL LAA L + +GI L KE+ K+IE VT W+
Sbjct: 135 DVSMGNAVDLRVLAAEKLGAEQWKN-SGIKSLVKEI-------LGKQIEKPKRVTMSRWD 186
Query: 168 AWVFTDKQVLHAVEEARGCYIVADKLLS 195
T QV +A +A CY + + L +
Sbjct: 187 NEWLTGDQVQYACLDAFLCYKIGENLYA 214
>gi|222628416|gb|EEE60548.1| hypothetical protein OsJ_13896 [Oryza sativa Japonica Group]
Length = 166
Score = 53.1 bits (126), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 43/159 (27%), Positives = 70/159 (44%), Gaps = 12/159 (7%)
Query: 41 VVGFDVKFNSQTRIA---EMLILSAANLCLAIQLCRLSRIPESVTNFLADRTICFVGFGV 97
VVG DV++ + +L L CL Q+ +P++++ FLAD FVG GV
Sbjct: 10 VVGLDVEWRPAAPVPGPVAVLQLCVDRRCLVFQILHADYVPDALSRFLADPRFTFVGVGV 69
Query: 98 DKKTASIHGKTGYPRNCDTGIDLGHLAARVLKKPKLIGLTGIAELAKEV-GIDHNSLSNK 156
A + + GY +DL LAA L +P L G+ L +EV G+ + +
Sbjct: 70 RDDAARL--RVGYGLEVPRAVDLRALAADTLGRPDL-RRAGLRALVREVMGVQMDKPHHV 126
Query: 157 EIEAVTPPNWNAWVFTDKQVLHAVEEARGCYIVADKLLS 195
+ A W+ ++ Q +A +A V +L +
Sbjct: 127 RVSA-----WDKRNLSEDQFKYACADAFASREVGRRLYT 160
>gi|116309147|emb|CAH66248.1| OSIGBa0101A01.4 [Oryza sativa Indica Group]
Length = 211
Score = 53.1 bits (126), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 46/179 (25%), Positives = 77/179 (43%), Gaps = 18/179 (10%)
Query: 27 KISELSGMLFKMRR------VVGFDVKFNSQTRIA---EMLILSAANLCLAIQLCRLSRI 77
K+ G +++ R VVG DV++ + +L L CL Q+ +
Sbjct: 35 KVESWLGETYRIHRSCGHPLVVGLDVEWRPAAPVPGPVAVLQLCVDRRCLVFQILHADYL 94
Query: 78 PESVTNFLADRTICFVGFGVDKKTASIHGKTGYPRNCDTGIDLGHLAARVLKKPKLIGLT 137
P++++ FLAD FVG GV A + + GY +DL LAA L +P L
Sbjct: 95 PDALSRFLADPRYTFVGVGVRDDAARL--RVGYGLEVPRAVDLRALAADTLGRPDLR-RA 151
Query: 138 GIAELAKEV-GIDHNSLSNKEIEAVTPPNWNAWVFTDKQVLHAVEEARGCYIVADKLLS 195
G+ L +EV G+ + + + A W+ ++ Q +A +A V +L +
Sbjct: 152 GLRALVREVMGVQMDKPHHVRVSA-----WDKRNLSEDQFKYACTDAFASREVGRRLYT 205
>gi|226503994|ref|NP_001150086.1| LOC100283715 [Zea mays]
gi|195636594|gb|ACG37765.1| 3-5 exonuclease/ nucleic acid binding protein [Zea mays]
Length = 200
Score = 52.4 bits (124), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 69/161 (42%), Gaps = 15/161 (9%)
Query: 41 VVGFDVK----FNSQTRIAEMLILSAANLCLAIQLCRLSRIPESVTNFLADRTICFVGFG 96
VVG DV+ F+ +L L CL QL +P ++ FL+D FVG G
Sbjct: 46 VVGLDVEWRPSFSRAYSKTAILQLCVGRRCLIFQLLHADYVPNTLDEFLSDPDYTFVGVG 105
Query: 97 VDKKTASIHGKTGYPRNCDTGIDLGHLAARVLKKPKL--IGLTGIAELAKEVGIDHNSLS 154
V + + Y DL LAA+ + P L GL GIA + + ++
Sbjct: 106 VAADVERL--ENDYDLEVANAEDLAELAAKEMGHPDLRNAGLQGIARVVMDAHVE----- 158
Query: 155 NKEIEAVTPPNWNAWVFTDKQVLHAVEEARGCYIVADKLLS 195
+ + V W+A +D+Q+ +A +A + V LLS
Sbjct: 159 --KPQWVRTGPWDASSLSDEQIEYATIDAFVSFEVGRMLLS 197
>gi|449437986|ref|XP_004136771.1| PREDICTED: Werner Syndrome-like exonuclease-like [Cucumis sativus]
gi|449506025|ref|XP_004162631.1| PREDICTED: Werner Syndrome-like exonuclease-like [Cucumis sativus]
Length = 210
Score = 52.4 bits (124), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 84/202 (41%), Gaps = 20/202 (9%)
Query: 4 YELEIKDVKFKVSVIDDADVIDKKISELSGMLFKMRR--VVGFDVK----FNSQTR-IAE 56
Y++ D + V ++D ISE+ + + VVG DV+ F+ R
Sbjct: 19 YDITFDDDEILTLVTASPSMVDMWISEILRIHRRRLHRLVVGLDVEWRPNFDRHFRNPVA 78
Query: 57 MLILSAANLCLAIQLCRLSRIPESVTNFLADRTICFVGFGVDKKTASIHGKTGYPRNCDT 116
L L CL QL S P+S+ +FL D T FVG G+D ++ Y N
Sbjct: 79 TLQLCVGRRCLIFQLIHASETPQSLIDFLEDDTFTFVGVGIDNDVLKLYND--YDLNVAN 136
Query: 117 GIDLGHLAARVLKKPKLIGLTGIAELAKEVGIDHNSLSNKEIEA---VTPPNWNAWVFTD 173
+DL LAA ++ + G+ L +EV +EI+ V W+
Sbjct: 137 TVDLRELAADEMQSDEF-RTAGLKTLGREV-------LGREIDKPRNVKLSRWDRQWLNP 188
Query: 174 KQVLHAVEEARGCYIVADKLLS 195
Q+L+A +A + + LLS
Sbjct: 189 AQILYATVDAFLSFEIGRYLLS 210
>gi|302802887|ref|XP_002983197.1| hypothetical protein SELMODRAFT_118004 [Selaginella moellendorffii]
gi|300148882|gb|EFJ15539.1| hypothetical protein SELMODRAFT_118004 [Selaginella moellendorffii]
Length = 184
Score = 52.4 bits (124), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 50/193 (25%), Positives = 83/193 (43%), Gaps = 24/193 (12%)
Query: 12 KFKVSVIDDADVIDKKISELSGMLFKMRRVVGFDVKFNSQTRIAE-----MLILSAANLC 66
K V V DA I+ + G +F G D+++ + E ++ + C
Sbjct: 6 KIDVVVTSDAAEIESWVLRQEGSVF------GVDLEWKPNRVMGEENKVALIQICGETEC 59
Query: 67 LAIQLCRLSRIPESVTNFLADRT--ICFVGFGVDKKTASIHGKTGYPRNCDTGIDLGHLA 124
L +Q+C + +IP+++ FL + + F G GV + G C ++LG LA
Sbjct: 60 LIVQMCYIDQIPDALVEFLKNSSSKAMFGGVGVKNDAEKLERDHGLV--CKGTVELGVLA 117
Query: 125 ARVLKKPKL--IGLTGIAELAKEVGIDHNSLSNKEIEAVTPPNWNAWVFTDKQVLHAVEE 182
L +L GL +A + +G+D + + VT NW +D QV +A +
Sbjct: 118 TEKLGNQRLRNQGLKKMASIVIGLGMD-------KPKRVTMSNWENLHLSDAQVNYACVD 170
Query: 183 ARGCYIVADKLLS 195
A Y + KLLS
Sbjct: 171 AWVSYAILQKLLS 183
>gi|170048985|ref|XP_001853674.1| 3'-5' exonuclease [Culex quinquefasciatus]
gi|167870951|gb|EDS34334.1| 3'-5' exonuclease [Culex quinquefasciatus]
Length = 755
Score = 52.4 bits (124), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 40/149 (26%), Positives = 72/149 (48%), Gaps = 16/149 (10%)
Query: 40 RVVGFDVKF----NSQTRIAEMLILSAANLCLAIQLCRLSRIPESVTNFLADRTICFVGF 95
R++GFD ++ + +A + + S LC I+LC++ RIP + L D I VG
Sbjct: 71 RILGFDCEWVTEKGKRHPVALLQLASHQGLCALIRLCQMKRIPPELGELLNDPGILKVGI 130
Query: 96 GVDKKTASIHGKTGYPRNCDTGIDLGHLAARVLKKPKLIGLTGIAELA-KEVGIDHNSLS 154
G + + ++ Y ++ +DL HLA R ++ G G+A LA K +G+ +
Sbjct: 131 GAIEDAQLL--RSDYNLKVESALDLRHLAERC----RVPGPYGMARLAEKSLGLQLDKHW 184
Query: 155 NKEIEAVTPPNWNAWVFTDKQVLHAVEEA 183
V +W A +++Q+ +A +A
Sbjct: 185 R-----VRASDWEALELSERQLKYAANDA 208
>gi|414881130|tpg|DAA58261.1| TPA: 3-5 exonuclease/ nucleic acid binding protein [Zea mays]
Length = 200
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 69/161 (42%), Gaps = 15/161 (9%)
Query: 41 VVGFDVK----FNSQTRIAEMLILSAANLCLAIQLCRLSRIPESVTNFLADRTICFVGFG 96
VVG DV+ F+ +L L CL QL +P ++ FL+D FVG G
Sbjct: 46 VVGLDVEWRPSFSRAYSKTAILQLCVGRRCLIFQLLHADYVPNTLDEFLSDPDYTFVGVG 105
Query: 97 VDKKTASIHGKTGYPRNCDTGIDLGHLAARVLKKPKL--IGLTGIAELAKEVGIDHNSLS 154
V + + Y DL LAA+ + P L GL GIA + + ++
Sbjct: 106 VAADVERL--ENDYDLEVANAEDLAELAAKEMGHPDLRNAGLQGIARVVMDAHVE----- 158
Query: 155 NKEIEAVTPPNWNAWVFTDKQVLHAVEEARGCYIVADKLLS 195
+ + V W+A +D+Q+ +A +A + V LLS
Sbjct: 159 --KPQWVRTGPWDASSLSDEQIEYATIDAFVSFEVGRMLLS 197
>gi|147818276|emb|CAN64721.1| hypothetical protein VITISV_026722 [Vitis vinifera]
Length = 196
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/138 (28%), Positives = 65/138 (47%), Gaps = 9/138 (6%)
Query: 14 KVSVIDDADVIDKKISELSGMLFKMRRVVGFDVKFN-----SQTRIAEMLILSAANLCLA 68
+ ++ D A + D+ + E+ + VVG D+++ S + + L L + CL
Sbjct: 30 ETTLTDKAAIADEWVREILSIHAGKPMVVGLDIEWRPHPIRSMSNKSATLQLCIDDKCLI 89
Query: 69 IQLCRLSRIPESVTNFLADRTICFVGFGVDKKTASIHGKTGYPRNCDTGIDLGHLAARVL 128
+QL + IPES+ +FLAD FVG V A + K Y +C D+ LA +
Sbjct: 90 LQLFYMDEIPESLKSFLADSNFTFVGIEVGDDIAKL--KNEYGLDCSRSADIRDLAMQ-- 145
Query: 129 KKPKLIGLTGIAELAKEV 146
+ P G+ +LA EV
Sbjct: 146 RWPGRFRRPGLKDLAWEV 163
>gi|115438991|ref|NP_001043775.1| Os01g0660800 [Oryza sativa Japonica Group]
gi|55773822|dbj|BAD72360.1| hypothetical protein [Oryza sativa Japonica Group]
gi|55773961|dbj|BAD72488.1| hypothetical protein [Oryza sativa Japonica Group]
gi|113533306|dbj|BAF05689.1| Os01g0660800 [Oryza sativa Japonica Group]
gi|125527143|gb|EAY75257.1| hypothetical protein OsI_03144 [Oryza sativa Indica Group]
Length = 199
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 84/197 (42%), Gaps = 14/197 (7%)
Query: 3 IYELEIKDVKFKVSVIDDADVIDKKISELSGMLFKMRRVVGFDVKFNSQTRIAE----ML 58
+ E+ D +V ++ + E+ + +VG DV++ A+ +L
Sbjct: 10 VTEVAFGDAVITTTVTSSGAAVEGWLREVRAA-YGPGLIVGLDVEWRPSYGPAQNPVALL 68
Query: 59 ILSAANLCLAIQLCRLSRIPESVTNFLADRTICFVGFGVDKKTASIHGKTGYPRNCDTGI 118
L CL QL +P S+ FLA CFVG GVDK + G
Sbjct: 69 QLCVDRRCLIFQLLYADYVPGSLRRFLAGAADCFVGVGVDKDAERLSDDHGL--TVANTA 126
Query: 119 DLGHLAARVLKKPKLIGLTGIAELAKEV-GIDHNSLSNKEIEAVTPPNWNAWVFTDKQVL 177
DL LAA+ L +P+L G+ + + V G D + + VT W+A +++Q+
Sbjct: 127 DLRPLAAQRLGRPEL-SQAGLQAVVRAVMGADL-----VKPQRVTMSRWDASCLSNEQIR 180
Query: 178 HAVEEARGCYIVADKLL 194
+A +A + V +LL
Sbjct: 181 YACIDAYVSFEVGRRLL 197
>gi|125546566|gb|EAY92705.1| hypothetical protein OsI_14456 [Oryza sativa Indica Group]
Length = 231
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/129 (29%), Positives = 58/129 (44%), Gaps = 12/129 (9%)
Query: 27 KISELSGMLFKMRR------VVGFDVKFNSQTRIA---EMLILSAANLCLAIQLCRLSRI 77
K+ G +++ R VVG DV++ + +L L CL Q+ +
Sbjct: 35 KVESWLGETYRIHRSCGHPLVVGLDVEWRPAAPVPGPVAVLQLCVDRRCLVFQILHADYV 94
Query: 78 PESVTNFLADRTICFVGFGVDKKTASIHGKTGYPRNCDTGIDLGHLAARVLKKPKLIGLT 137
P++++ FLAD FVG GV A + + GY +DL LAA L +P L
Sbjct: 95 PDALSRFLADPRFTFVGVGVRDDAARL--RVGYGLEVPRAVDLRALAADTLGRPDLR-RA 151
Query: 138 GIAELAKEV 146
G+ L +EV
Sbjct: 152 GLRALVREV 160
>gi|302812014|ref|XP_002987695.1| hypothetical protein SELMODRAFT_126531 [Selaginella moellendorffii]
gi|300144587|gb|EFJ11270.1| hypothetical protein SELMODRAFT_126531 [Selaginella moellendorffii]
Length = 184
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 50/193 (25%), Positives = 83/193 (43%), Gaps = 24/193 (12%)
Query: 12 KFKVSVIDDADVIDKKISELSGMLFKMRRVVGFDVKFNSQTRIAE-----MLILSAANLC 66
K V V DA I+ + G +F G D+++ + E ++ + C
Sbjct: 6 KIDVVVTSDAAEIESWVLRQDGSVF------GVDLEWKPNRVMGEENKVALIQICGETEC 59
Query: 67 LAIQLCRLSRIPESVTNFLADRT--ICFVGFGVDKKTASIHGKTGYPRNCDTGIDLGHLA 124
L +Q+C + +IP+++ FL + + F G GV + G C ++LG LA
Sbjct: 60 LIVQMCYIDQIPDALVEFLKNSSSKAMFGGVGVKNDAEKLERDHGLV--CKGTVELGVLA 117
Query: 125 ARVLKKPKL--IGLTGIAELAKEVGIDHNSLSNKEIEAVTPPNWNAWVFTDKQVLHAVEE 182
L +L GL +A + +G+D + + VT NW +D QV +A +
Sbjct: 118 TEKLGNQQLRNQGLKKMASIVIGLGMD-------KPKRVTMSNWENLHLSDAQVNYACVD 170
Query: 183 ARGCYIVADKLLS 195
A Y + KLLS
Sbjct: 171 AWVSYAILQKLLS 183
>gi|242057157|ref|XP_002457724.1| hypothetical protein SORBIDRAFT_03g012385 [Sorghum bicolor]
gi|241929699|gb|EES02844.1| hypothetical protein SORBIDRAFT_03g012385 [Sorghum bicolor]
Length = 183
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 47/170 (27%), Positives = 72/170 (42%), Gaps = 19/170 (11%)
Query: 16 SVIDDADVIDKKISELSGMLFK-MRRVVGFDVKFNSQTRI-----AEMLILSAANLCLAI 69
+V DA V D + + + R +VG D ++ R +L L A CL +
Sbjct: 5 TVTRDAAVADDWVRTVRAANPRGARLIVGLDCEWKPNYRSWTTSKVAILQLCAGTRCLVL 64
Query: 70 QLCRLSRIPESVTNFLADRTICFVGFGVDKKTASIHGKTGYPRNCDTGIDL----GHLAA 125
QL + R+P SV +FLAD + FVG GV + A + G C +DL
Sbjct: 65 QLLYVDRVPASVRSFLADPDVLFVGIGVGEDVAKLDADYGL--TCAAHVDLESRCNDYLG 122
Query: 126 RVLKKPKLIGLTGIAE------LAKEVGIDHNSLSNKEI-EAVTPPNWNA 168
R + +GL G AE + K G+ ++ ++ EA W+A
Sbjct: 123 RYTGVGRRLGLKGYAEEVLGLFMEKPRGVTMSNWEKHDLEEAQIRYKWHA 172
>gi|357130643|ref|XP_003566957.1| PREDICTED: Werner Syndrome-like exonuclease-like [Brachypodium
distachyon]
Length = 201
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 88/200 (44%), Gaps = 24/200 (12%)
Query: 8 IKDVKFKVSVIDDADVIDKKISELSGMLFKMRR-----VVGFDVKF-----NSQTRIAEM 57
+ DV F+ +VI + + G L ++R VVG DV++ +SQ +A +
Sbjct: 7 VTDVTFEENVI--ITTVTSSGVAVEGWLREIRSFLGDLVVGLDVEWRPSRCSSQNPVA-L 63
Query: 58 LILSAANLCLAIQLCRLSRIPESVTNFLADRTICFVGFGVDKKTASIHGKTGYPRNCDTG 117
L L + CL QL +P +++ FLAD + FVG GV + + N
Sbjct: 64 LQLCVGHRCLIFQLLHADFVPPALSEFLADLNVRFVGVGVQDDVERL--SDDHELNVANA 121
Query: 118 IDLGHLAARVLKKPKL--IGLTGIAELAKEVGIDHNSLSNKEIEAVTPPNWNAWVFTDKQ 175
DL LAA P+L GL IA + ++ + V W+A+ + +Q
Sbjct: 122 KDLRELAADGFHMPELRQAGLQAIARTVMGANL-------QKPQRVRMGPWDAYCLSHEQ 174
Query: 176 VLHAVEEARGCYIVADKLLS 195
+ +A +A + + KLL+
Sbjct: 175 IKYACIDAFVSFEIGRKLLT 194
>gi|225437612|ref|XP_002271430.1| PREDICTED: Werner Syndrome-like exonuclease-like [Vitis vinifera]
Length = 196
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 50/193 (25%), Positives = 87/193 (45%), Gaps = 26/193 (13%)
Query: 14 KVSVIDDADVIDKKISELSGMLFKMRRVVGFDVKFN------SQTRIAEMLILSAANLCL 67
+ +V D +D ++ + + +VG D +++ + RIA L L CL
Sbjct: 15 ETTVTDRGSEVDSWVNTILAVYRGGDMIVGLDCEWSPTFLSGTSNRIA-TLQLCVDTKCL 73
Query: 68 AIQLCRLSRIPESVTNFLADRTICFVGFGVDKKTASIHGKTGYPRNCDTGIDLGHLAA-- 125
+QL IP+S NFL++ + FVG V+ + + Y +C ++ LA
Sbjct: 74 ILQLFYTDYIPQSFKNFLSNPAVTFVGVEVESDAMKLRDE--YELDCQETSNIRALACSF 131
Query: 126 ---RVLKKPKLIGLTGIAELAKE-VGIDHNSLSNKEIEAVTPPNWNAWVFTDKQVLHAVE 181
R ++P G+ +LA + VG+ L K I V NW A + +++QV +A
Sbjct: 132 WPNRWYRRP------GLKDLAFQIVGL----LMQKPIH-VCSSNWEARILSNEQVEYASI 180
Query: 182 EARGCYIVADKLL 194
+A Y + +LL
Sbjct: 181 DAYASYRIGHRLL 193
>gi|449437715|ref|XP_004136636.1| PREDICTED: Werner Syndrome-like exonuclease-like [Cucumis sativus]
gi|449506001|ref|XP_004162625.1| PREDICTED: Werner Syndrome-like exonuclease-like [Cucumis sativus]
Length = 209
Score = 50.4 bits (119), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 46/156 (29%), Positives = 69/156 (44%), Gaps = 29/156 (18%)
Query: 41 VVGFDVKFNSQTRIAE----MLILSAANLCLAIQLCRLSRIPESVTNFLADRTICFVGFG 96
+VG D+++ R + L L CL +QL + IP+S+ FL + + FVG G
Sbjct: 55 LVGLDIEWRPNNRSYDNPVATLQLCIGRRCLILQLLHMPEIPKSLFEFLENESFTFVGVG 114
Query: 97 VDKKTASIHGKTGYPRNCDTGI------DLGHLAARVLKKPKLIGLTGIAELAKEVGIDH 150
+D+ + NCD G+ DL LA V + +L G+ L KEV
Sbjct: 115 IDEDAEKL--------NCDYGLKVGKRMDLRDLAESVTGRGELKN-AGLKRLGKEV---- 161
Query: 151 NSLSNKEI---EAVTPPNWNAWVFTDKQVLHAVEEA 183
KEI ++VT W+ T QV +A +A
Sbjct: 162 ---LGKEIHKPKSVTMSRWDQEWLTLNQVKYACIDA 194
>gi|307136028|gb|ADN33882.1| 3'-5' exonuclease [Cucumis melo subsp. melo]
Length = 209
Score = 50.4 bits (119), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 46/156 (29%), Positives = 69/156 (44%), Gaps = 29/156 (18%)
Query: 41 VVGFDVKFNSQTRIAE----MLILSAANLCLAIQLCRLSRIPESVTNFLADRTICFVGFG 96
+VG D+++ R + L L CL +QL + IP+S+ FL + + FVG G
Sbjct: 55 LVGLDIEWRPNNRSYDNPVATLQLCIGRRCLILQLLHIPEIPKSLFEFLENESFTFVGVG 114
Query: 97 VDKKTASIHGKTGYPRNCDTGI------DLGHLAARVLKKPKLIGLTGIAELAKEVGIDH 150
+D+ + NCD G+ DL LA V + +L G+ L KEV
Sbjct: 115 IDEDAEKL--------NCDYGLKVGKRMDLRDLAESVTGRGELKN-AGLKRLGKEV---- 161
Query: 151 NSLSNKEI---EAVTPPNWNAWVFTDKQVLHAVEEA 183
KEI ++VT W+ T QV +A +A
Sbjct: 162 ---LGKEIHKPKSVTMSRWDQEWLTLNQVKYACIDA 194
>gi|380016412|ref|XP_003692179.1| PREDICTED: LOW QUALITY PROTEIN: exonuclease 3'-5' domain-containing
protein 2-like [Apis florea]
Length = 613
Score = 50.1 bits (118), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 48/196 (24%), Positives = 91/196 (46%), Gaps = 17/196 (8%)
Query: 4 YELEIKDVKF---KVSVIDDADVIDKKISELSGMLFKMRRVVGFDVKFNSQTRIAEMLIL 60
Y+ + KD+K K+ + D + D I + L V+GFD ++ ++ ++ + +
Sbjct: 47 YDQKKKDLKITLDKIILADTPEKCDYAIQRIHCNL--SNDVLGFDCEWVNEGPVSLLQLA 104
Query: 61 SAANLCLAIQLCRLSRIPESVTNFLADRTICFVGFGVDKKTASIHGKTGYPRNCDTGIDL 120
+ +C ++ ++ IP+ + LA++ I VG + I G + C+T +DL
Sbjct: 105 TFNGVCGLFRISKIGYIPQKLEELLANKRILKVGVASYEDGQKIIADYGC-KVCNT-LDL 162
Query: 121 GHLAARV-LKKPKLIGLTGIAELAKEVGIDHNSLSNKEIEAVTPPNWNAWVFTDKQVLHA 179
LA RV L PK + + L E+ ++ V NWNA TD+QV +A
Sbjct: 163 RTLAERVNLPSPKSLAAMSLQYLGLEMD---------KLIKVRCSNWNAGTLTDEQVAYA 213
Query: 180 VEEARGCYIVADKLLS 195
+A ++ D+++
Sbjct: 214 ACDALASVLIYDQIMQ 229
>gi|157133260|ref|XP_001656205.1| 3-5 exonuclease [Aedes aegypti]
gi|108870910|gb|EAT35135.1| AAEL012690-PA [Aedes aegypti]
Length = 771
Score = 50.1 bits (118), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 42/148 (28%), Positives = 67/148 (45%), Gaps = 14/148 (9%)
Query: 40 RVVGFDVKF-NSQTRIAEMLILSAAN---LCLAIQLCRLSRIPESVTNFLADRTICFVGF 95
RV+GFD ++ N Q + + +L A LC I+LC + RIP + L D I VG
Sbjct: 70 RVLGFDCEWVNEQGKRHPVALLQLATHRGLCALIRLCEMKRIPPELGELLNDPAIVKVGV 129
Query: 96 GVDKKTASIHGKTGYPRNCDTGIDLGHLAARVLKKPKLIGLTGIAELAKEVGIDHNSLSN 155
G + + + Y ++ +DL HLA R P G+ +AE V +D +
Sbjct: 130 GPLEDAKLL--RHDYNLKVESTLDLRHLADRC-GVPGPYGMAKLAEKTLGVKLDKHW--- 183
Query: 156 KEIEAVTPPNWNAWVFTDKQVLHAVEEA 183
+ NW T++Q+ +A +A
Sbjct: 184 ----RIRASNWENAQLTERQIQYAASDA 207
>gi|242058239|ref|XP_002458265.1| hypothetical protein SORBIDRAFT_03g030200 [Sorghum bicolor]
gi|241930240|gb|EES03385.1| hypothetical protein SORBIDRAFT_03g030200 [Sorghum bicolor]
Length = 201
Score = 50.1 bits (118), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 74/162 (45%), Gaps = 16/162 (9%)
Query: 41 VVGFDVK----FNSQTRIAEMLILSAANLCLAIQLCRLSRIPESVTNFLADRT-ICFVGF 95
VVG DV+ F+ +L L CL Q+ R +P ++ FL D + FVG
Sbjct: 46 VVGLDVEWRPSFSRAYSKTAILQLCVGRRCLVFQILRAGYVPIALAEFLGDDSGYTFVGV 105
Query: 96 GVDKKTASIHGKTGYPRNCDTGIDLGHLAARVLKKPKL--IGLTGIAELAKEVGIDHNSL 153
GV+ + G +DL +LAA +++ L GL GIA + ++
Sbjct: 106 GVEADAQRLCDDYGL--EVGHTVDLAYLAAEKMERRDLRNAGLKGIAAAVMDAHVE---- 159
Query: 154 SNKEIEAVTPPNWNAWVFTDKQVLHAVEEARGCYIVADKLLS 195
+ ++V W+A+ +D+QV +A +A + V +LL+
Sbjct: 160 ---KPQSVRIGPWDAYDLSDEQVKYATIDAFVSFEVGRRLLN 198
>gi|147777289|emb|CAN60287.1| hypothetical protein VITISV_011782 [Vitis vinifera]
Length = 208
Score = 49.7 bits (117), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 46/152 (30%), Positives = 65/152 (42%), Gaps = 21/152 (13%)
Query: 41 VVGFDVKFNSQ----TRIAEMLILSAANLCLAIQLCRLSRIPESVTNFLADRTICFVGFG 96
+VG D+++ T +L L CL QL IP S+ +FL D FVG G
Sbjct: 54 IVGLDIEWRPNNARYTNPVAILQLCVGRRCLIFQLLYAPEIPTSLIDFLGDTDYTFVGVG 113
Query: 97 VDKKTASIHGKTGYPRNCDTG--IDLGHLAARVLKKPKLIGLTGIAELAKEVGIDHNSLS 154
+ + + N G +DL LAARVL +L GI LA+EV
Sbjct: 114 IQADSQKLLND----HNLRVGNVVDLAVLAARVLNTRELRN-AGIKRLAREV-------L 161
Query: 155 NKEIEA---VTPPNWNAWVFTDKQVLHAVEEA 183
+E+E V W+ +D QV +A +A
Sbjct: 162 GREVEKPKHVARSRWDTDWLSDAQVHYACVDA 193
>gi|297741701|emb|CBI32833.3| unnamed protein product [Vitis vinifera]
Length = 208
Score = 49.7 bits (117), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 46/152 (30%), Positives = 65/152 (42%), Gaps = 21/152 (13%)
Query: 41 VVGFDVKFNSQ----TRIAEMLILSAANLCLAIQLCRLSRIPESVTNFLADRTICFVGFG 96
+VG D+++ T +L L CL QL IP S+ +FL D FVG G
Sbjct: 54 IVGLDIEWRPNNARYTNPVAILQLCVGRRCLIFQLLYAPEIPTSLIDFLGDTDYTFVGVG 113
Query: 97 VDKKTASIHGKTGYPRNCDTG--IDLGHLAARVLKKPKLIGLTGIAELAKEVGIDHNSLS 154
+ + + N G +DL LAARVL +L GI LA+EV
Sbjct: 114 IQADSQKLLND----HNLRVGNVVDLAVLAARVLNTRELRN-AGIKRLAREV-------L 161
Query: 155 NKEIEA---VTPPNWNAWVFTDKQVLHAVEEA 183
+E+E V W+ +D QV +A +A
Sbjct: 162 GREVEKPKHVARSRWDTDWLSDAQVHYACVDA 193
>gi|357130639|ref|XP_003566955.1| PREDICTED: Werner Syndrome-like exonuclease-like [Brachypodium
distachyon]
Length = 234
Score = 49.3 bits (116), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 74/166 (44%), Gaps = 16/166 (9%)
Query: 29 SELSGMLFKMRRVVGFDVKFNSQTRIAEMLILSAANLCLAIQLCRLSRIPESVTNFLADR 88
+E + K RR F + +L L + CL Q+ +P + FLA+
Sbjct: 80 TEWRQISHKGRRAKSFQIA---------LLQLCVGDRCLVFQIFNADYVPHQLAEFLANP 130
Query: 89 TICFVGFGVDKKTASIHGKTGYPRNCDTGIDLGHLAARVLKKPKLIGLTGIAELAKEVGI 148
CFV GV + G +DL +AA VL +PKL +G+ LA+EV
Sbjct: 131 DHCFVAVGVGGDEQRLREDCGI--EVAYTMDLPEVAADVLHRPKL-RQSGLKTLAREV-- 185
Query: 149 DHNSLSNKEIEAVTPPNWNAWVFTDKQVLHAVEEARGCYIVADKLL 194
+L +K + VT +W++ T +QV +A +A + V +LL
Sbjct: 186 -MGALIDKP-KRVTLSDWSSEHLTWEQVRYACIDAFVSFDVGRRLL 229
>gi|357130641|ref|XP_003566956.1| PREDICTED: Werner Syndrome-like exonuclease-like [Brachypodium
distachyon]
Length = 203
Score = 49.3 bits (116), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 42/147 (28%), Positives = 64/147 (43%), Gaps = 15/147 (10%)
Query: 43 GFDVK----FNSQTRIAEMLILSAANLCLAIQLCRLSRIPESVTNFLADRTICFVGFGVD 98
G DV+ + A +L L N CL QL IP+++ + L D FVG GVD
Sbjct: 51 GLDVEWRPSYGRARNPAALLQLCVQNRCLVFQLLHADYIPQALADSLVDPRWSFVGVGVD 110
Query: 99 KKTASIHGKTGYPRNCDTGIDLGHLAARVLKKPKL--IGLTGIAELAKEVGIDHNSLSNK 156
+ G +DL LAA L+ P+L GL +A V I+
Sbjct: 111 ADAVRLGNDYGL--QVANTVDLRGLAAGQLRMPELRQAGLVRLAHAVTGVNIE------- 161
Query: 157 EIEAVTPPNWNAWVFTDKQVLHAVEEA 183
+ + V W+A+ +D+Q+ +A +A
Sbjct: 162 KPQRVRMSAWDAYRLSDEQIHYACIDA 188
>gi|449437988|ref|XP_004136772.1| PREDICTED: Werner Syndrome-like exonuclease-like [Cucumis sativus]
gi|449506029|ref|XP_004162632.1| PREDICTED: Werner Syndrome-like exonuclease-like [Cucumis sativus]
Length = 211
Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 71/163 (43%), Gaps = 17/163 (10%)
Query: 41 VVGFDVK----FNSQTRIAEMLILSAANLCLAIQLCRLSRIPESVTNFLADRTICFVGFG 96
+VG D++ F + L L + CL QL P+++ NFL D + FVG G
Sbjct: 59 IVGLDIEWRPYFGPKPNPVATLQLCVGHRCLIFQLLYCPAAPQALVNFLFDSSCTFVGVG 118
Query: 97 VDKKTASIHGKTGYPRNCDTGIDLGHLAARVLKKPKLIGLTGIAELAKEVGIDHNSLSNK 156
+ + ++ + G +DL LA L + L G+ L +EV +
Sbjct: 119 IHQDVQKLYHEYGL--TVSNVVDLRDLAVNKLGRTYL-RYAGLKSLWREV-------LGR 168
Query: 157 EIE---AVTPPNWNAWVFTDKQVLHAVEEARGCYIVADKLLSL 196
EIE +T NW++ Q+L+A +A + + L++L
Sbjct: 169 EIEKPKYITLSNWDSVWLNYAQILYATIDAFISFEIGRSLMNL 211
>gi|328783376|ref|XP_001121410.2| PREDICTED: exonuclease 3'-5' domain-containing protein 2-like [Apis
mellifera]
Length = 613
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/156 (25%), Positives = 75/156 (48%), Gaps = 12/156 (7%)
Query: 41 VVGFDVKFNSQTRIAEMLILSAANLCLAIQLCRLSRIPESVTNFLADRTICFVGFGVDKK 100
V+GFD ++ ++ ++ + + + +C ++ ++ IP+ + LA++ I VG +
Sbjct: 85 VLGFDCEWVNEGPVSLLQLATFNGVCGLFRIGKIGYIPQKLEELLANKRILKVGVASYED 144
Query: 101 TASIHGKTGYPRNCDTGIDLGHLAARV-LKKPKLIGLTGIAELAKEVGIDHNSLSNKEIE 159
I G + C+T +DL LA RV L PK + + L E+ ++
Sbjct: 145 GQKIIADYGC-KVCNT-LDLRTLAERVNLPSPKSLAAMSLQYLGLEMD---------KLI 193
Query: 160 AVTPPNWNAWVFTDKQVLHAVEEARGCYIVADKLLS 195
V NWNA TD+QV +A +A ++ D++L
Sbjct: 194 KVRCSNWNAGTLTDEQVAYAACDALASVLIYDQILQ 229
>gi|222618988|gb|EEE55120.1| hypothetical protein OsJ_02898 [Oryza sativa Japonica Group]
Length = 174
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/139 (30%), Positives = 63/139 (45%), Gaps = 9/139 (6%)
Query: 57 MLILSAANLCLAIQLCRLSRIPESVTNFLADRTICFVGFGVDKKTASIHGKTGYPRNCDT 116
+L L CL QL +P S+ FLA CFVG GVDK + G
Sbjct: 42 LLQLCVDRRCLIFQLLYADYVPGSLRRFLAGAADCFVGVGVDKDAERLSDDHGL--TVAN 99
Query: 117 GIDLGHLAARVLKKPKLIGLTGIAELAKEV-GIDHNSLSNKEIEAVTPPNWNAWVFTDKQ 175
DL LAA+ L +P+L G+ + + V G D + + VT W+A +++Q
Sbjct: 100 TADLRPLAAQRLGRPEL-SQAGLQAVVRAVMGADL-----VKPQRVTMSRWDASCLSNEQ 153
Query: 176 VLHAVEEARGCYIVADKLL 194
+ +A +A + V +LL
Sbjct: 154 IRYACIDAYVSFEVGRRLL 172
>gi|347966136|ref|XP_321572.5| AGAP001549-PA [Anopheles gambiae str. PEST]
gi|333470194|gb|EAA01810.5| AGAP001549-PA [Anopheles gambiae str. PEST]
Length = 824
Score = 47.8 bits (112), Expect = 0.002, Method: Composition-based stats.
Identities = 40/147 (27%), Positives = 71/147 (48%), Gaps = 15/147 (10%)
Query: 41 VVGFDVKFNS----QTRIAEMLILSAANLCLAIQLCRLSRIPESVTNFLADRTICFVGFG 96
V+GFD ++ S + +A + + S LC I+LC ++RIP+ + + L D I VG
Sbjct: 76 VLGFDCEWVSNQGKRRPVALLQLASHRGLCALIRLCMINRIPQELYDLLNDDNIIKVGVS 135
Query: 97 VDKKTASIHGKTGYPRNCDTGIDLGHLAARVLKKPKLIGLTGIAELAKEVGIDHNSLSNK 156
+ + + Y ++ +DL ++A R +P GIA LA EV L+
Sbjct: 136 PYEDARVL--REDYRLKVESTLDLRYMAERAGLEP-----LGIARLANEV----LGLTLD 184
Query: 157 EIEAVTPPNWNAWVFTDKQVLHAVEEA 183
+ V +W + +D+Q+ +A +A
Sbjct: 185 KHWKVRCSDWESPELSDRQIKYAASDA 211
>gi|289739467|gb|ADD18481.1| putative 3'-5' exonuclease [Glossina morsitans morsitans]
Length = 349
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/153 (27%), Positives = 69/153 (45%), Gaps = 25/153 (16%)
Query: 40 RVVGFDVKFNSQTRIAE---MLILSAAN-LCLAIQLCRLSRIPESVTNFLADRTICFVGF 95
+V+GFD ++ + R+ + +L L++ N C +LC + IPES+ N LAD+ I VG
Sbjct: 50 KVLGFDCEWITIGRVRKPVALLQLASPNGFCGLFRLCHMDHIPESLKNLLADKEIIKVGV 109
Query: 96 GVDKKTASIHGKTGYPRNCDTGIDLGHLAARVLKKPKLIGLTGIAELAKEVGIDHNSLSN 155
+ + G G + D+ +LAA + KP +G++ S S
Sbjct: 110 NPAEDARKLQGDYGI--YVASTFDIRYLAAMIRCKP--------------LGLEKLSRSL 153
Query: 156 KEIEAVTP-----PNWNAWVFTDKQVLHAVEEA 183
++ V P NW D QV +A +A
Sbjct: 154 LNVDFVKPWYIARSNWEFDKLDDDQVEYAANDA 186
>gi|242054355|ref|XP_002456323.1| hypothetical protein SORBIDRAFT_03g033980 [Sorghum bicolor]
gi|241928298|gb|EES01443.1| hypothetical protein SORBIDRAFT_03g033980 [Sorghum bicolor]
Length = 203
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/131 (25%), Positives = 56/131 (42%), Gaps = 19/131 (14%)
Query: 20 DADVIDKKISELS-------GMLFKMR----RVVGFDVKFNSQTRIAEM------LILSA 62
DAD ID ++ G +++ + G DV++ + L +
Sbjct: 19 DADHIDTTVTNFGSVVEWWLGETYRLHGRGGHIAGLDVEWRPARVPGPVVPPVAVLQICV 78
Query: 63 ANLCLAIQLCRLSRIPESVTNFLADRTICFVGFGVDKKTASIHGKTGYPRNCDTGIDLGH 122
+ CL Q+ R +P++++ FLAD FVG G+ A + GY + +DL
Sbjct: 79 DHRCLVFQILRADYVPDALSRFLADHRFTFVGVGIGDDVAKL--GAGYGLWVASAVDLRE 136
Query: 123 LAARVLKKPKL 133
LAA L +P L
Sbjct: 137 LAADTLGRPVL 147
>gi|225440183|ref|XP_002278250.1| PREDICTED: Werner Syndrome-like exonuclease [Vitis vinifera]
Length = 213
Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 48/154 (31%), Positives = 64/154 (41%), Gaps = 20/154 (12%)
Query: 39 RRVVGFDVK----FNSQTR-IAEMLILSAANLCLAIQLCRLSRIPESVTNFLADRTICFV 93
R +VG DV+ FN Q L L CL QL IP S+ FL + FV
Sbjct: 56 RLIVGLDVEWRPSFNPQIENPVATLQLCVGRSCLIFQLLHAPAIPASLNAFLRNPGYTFV 115
Query: 94 GFGVDKKTASIHGKTGYPRNCDTGIDLGHLAARVLKKPKL--IGLT--GIAELAKEVGID 149
G G+D + G G +DL LAA L K +L GL G+ L KEV
Sbjct: 116 GVGIDDDLEKLVGDHGL--GVSNAVDLRGLAAHELNKMELRNAGLKRLGLEVLGKEV--- 170
Query: 150 HNSLSNKEIEAVTPPNWNAWVFTDKQVLHAVEEA 183
++ VT W+ + + QV +A +A
Sbjct: 171 ------QKPRRVTLSRWDNFYLSTDQVQYACVDA 198
>gi|289740869|gb|ADD19182.1| putative 3'-5' exonuclease [Glossina morsitans morsitans]
Length = 568
Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 42/149 (28%), Positives = 71/149 (47%), Gaps = 17/149 (11%)
Query: 40 RVVGFDVKF----NSQTRIAEMLILSAANLCLAIQLCRLSRIPESVTNFLADRTICFVGF 95
+V+GFD ++ S+ +A + + S C +LC + +IP+S+ + LAD + +
Sbjct: 78 KVLGFDCEWVTVSGSRRPVALLQLCSNRGYCALFRLCCIRQIPKSLRDLLADEEV--IKV 135
Query: 96 GVDKKTASIHGKTGYPRNCDTGIDLGHLAARVLKKPKLIGLTGIAELAKEVGID-HNSLS 154
GVD + Y + DL +LA V +KP+ GL ++ +V +D H LS
Sbjct: 136 GVDPGYDAQKLAQDYGVGVASTFDLRYLATMVGRKPE--GLAKLSLSVLKVTLDKHWRLS 193
Query: 155 NKEIEAVTPPNWNAWVFTDKQVLHAVEEA 183
NW A T+KQ+ +A +A
Sbjct: 194 CS--------NWEAKDLTEKQIEYAANDA 214
>gi|242053889|ref|XP_002456090.1| hypothetical protein SORBIDRAFT_03g030280 [Sorghum bicolor]
gi|241928065|gb|EES01210.1| hypothetical protein SORBIDRAFT_03g030280 [Sorghum bicolor]
Length = 239
Score = 47.0 bits (110), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 48/169 (28%), Positives = 76/169 (44%), Gaps = 21/169 (12%)
Query: 33 GMLFKMRRVVGFDVKFNSQTRIAEMLILSAANLCLAIQLCRLSRIPESVTNFLADRTICF 92
G+ + R VV D + R+A +L L + CL Q +P ++ FLA+ F
Sbjct: 60 GLDTEWRVVVSHDDGYRDN-RMA-VLQLCVGHRCLVFQTVHADYVPAALRAFLANPDHRF 117
Query: 93 VGFGVDKKTASIHGKTGYPRNCD------TGIDLGHLAARVLKKPKLIGLTGIAELAKEV 146
VG VD ++ CD T +DL H+AA VL +P+L G+ L +EV
Sbjct: 118 VGVSVDGDVERLY--------CDCKILVATPVDLRHVAAEVLSRPEL-RRAGLKALVREV 168
Query: 147 GIDHNSLSNKEIEAVTPPNWNAWVFTDKQVLHAVEEARGCYIVADKLLS 195
+ ++ + VT W+ + +QV +A +A Y V LL+
Sbjct: 169 ----MGVVMEKPKHVTMSRWSRRPLSPEQVRYAAIDAFVSYEVGRLLLT 213
>gi|356566626|ref|XP_003551531.1| PREDICTED: Werner Syndrome-like exonuclease-like [Glycine max]
Length = 213
Score = 47.0 bits (110), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 43/152 (28%), Positives = 70/152 (46%), Gaps = 16/152 (10%)
Query: 40 RVVGFDVKFNSQTRIAEMLILSAANL-------CLAIQLCRLSRIPESVTNFLADRTICF 92
++VG DV++ T+ A L CL Q+ + +P ++T+FLA+R + F
Sbjct: 57 KIVGLDVEWRPNTQSNSQQPNPVATLQLCIDHNCLIFQILHATLVPRALTSFLANRHVKF 116
Query: 93 VGFGVDKKTASIHGKTGYPRNCDTGIDLGHLAARVLKKPKLIGLTGIAELAK-EVGIDHN 151
VG GV + Y + +DL LA + LK L G G+A L + +G+D N
Sbjct: 117 VGVGVRDDAQKL--LRDYNLHVANAVDLRSLAEQKLKVFWL-GSAGLAALGRFFLGVDIN 173
Query: 152 SLSNKEIEAVTPPNWNAWVFTDKQVLHAVEEA 183
+ +T W+ T +QV +A +A
Sbjct: 174 -----KPHHITTSLWDNRFLTHEQVQYATIDA 200
>gi|448825421|ref|YP_007418352.1| putative 3'-5' exonuclease [Megavirus lba]
gi|444236606|gb|AGD92376.1| putative 3'-5' exonuclease [Megavirus lba]
Length = 397
Score = 46.6 bits (109), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 35/158 (22%), Positives = 73/158 (46%), Gaps = 11/158 (6%)
Query: 42 VGFDVK--FNSQTRIAEMLILSAANLCLAIQLCRLSRIPESVTNFLADRTICFVGFGVDK 99
+GFD + + ++ LS ++ L +Q+ ++ +P +T L+D I +G +
Sbjct: 141 IGFDTETFMTGKAEKISIIQLSTIDVDLIVQVNKMDSLPTELTRLLSDPEIIKIGVSIRD 200
Query: 100 KTASIHGKTGYPRNCDTGIDLGHLAARVLKK---PKLIGLTGIAELAKEVGIDHNSLSNK 156
+I P + +DL L+ +L IGL +A + ++ L +K
Sbjct: 201 DMMAILKYFPNPL-IQSVLDLSDLSKDILDNLDNKNNIGLKTLAVITMDI-----YLPDK 254
Query: 157 EIEAVTPPNWNAWVFTDKQVLHAVEEARGCYIVADKLL 194
++ + NWNA + T KQ+ +AV ++ ++ K++
Sbjct: 255 DLSEIKKSNWNAEILTQKQIEYAVTDSYISLMIYYKMI 292
>gi|340725346|ref|XP_003401032.1| PREDICTED: exonuclease 3'-5' domain-containing protein 2-like
[Bombus terrestris]
Length = 613
Score = 46.2 bits (108), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 39/154 (25%), Positives = 75/154 (48%), Gaps = 12/154 (7%)
Query: 41 VVGFDVKFNSQTRIAEMLILSAANLCLAIQLCRLSRIPESVTNFLADRTICFVGFGVDKK 100
V+GFD ++ ++ ++ + + + +C ++ ++ IP+ + + LA++ I VG +
Sbjct: 85 VLGFDCEWANEGPVSLLQLATFNGVCGLFRIGKIGYIPQKLKDLLANKDILKVGVASYED 144
Query: 101 TASIHGKTGYPRNCDTGIDLGHLAARV-LKKPKLIGLTGIAELAKEVGIDHNSLSNKEIE 159
I G + IDL LAARV L P+ + + L E+ +K IE
Sbjct: 145 GQKILADYGC--RVSSTIDLRTLAARVKLPSPQSLAAMSLQYLGLEM--------DKLIE 194
Query: 160 AVTPPNWNAWVFTDKQVLHAVEEARGCYIVADKL 193
+ NW+A TD+QV +A +A ++ D++
Sbjct: 195 -IRCSNWDAGTLTDEQVAYAACDAIASVLIYDQI 227
>gi|157133254|ref|XP_001656202.1| hypothetical protein AaeL_AAEL012676 [Aedes aegypti]
gi|157133256|ref|XP_001656203.1| hypothetical protein AaeL_AAEL012676 [Aedes aegypti]
gi|108870907|gb|EAT35132.1| AAEL012676-PB [Aedes aegypti]
gi|108870908|gb|EAT35133.1| AAEL012676-PA [Aedes aegypti]
Length = 257
Score = 46.2 bits (108), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 69/149 (46%), Gaps = 16/149 (10%)
Query: 41 VVGFDVKF------NSQTRIAEMLILSAANLCLAIQLCRLSRIPESVTNFLADRTICFVG 94
V+GFD ++ + ++A + + SA LC+ +Q+ RL IP+ +++ L + I VG
Sbjct: 45 VLGFDCEWWCTSSMGNNRKVALLQLASAGGLCILVQMTRLHSIPQELSDLLHNDRILKVG 104
Query: 95 FGVDKKTASIHGKTGYPRNCDTGIDLGHLAARVLKKPKLIGLTGIAELAKEVGIDHNSLS 154
G +H G +DL LA R L P G+ +A+ +G + +
Sbjct: 105 IGPLADGIKLHQDYGLALR--GTMDLQTLAQR-LDVPVPYGMKALAK--SVLGFEMDKKK 159
Query: 155 NKEIEAVTPPNWNAWVFTDKQVLHAVEEA 183
N V NW + T +Q+ +A ++A
Sbjct: 160 N-----VILSNWERPLLTKRQIDYASKDA 183
>gi|157133258|ref|XP_001656204.1| hypothetical protein AaeL_AAEL012676 [Aedes aegypti]
gi|108870909|gb|EAT35134.1| AAEL012676-PC [Aedes aegypti]
Length = 200
Score = 45.8 bits (107), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 69/149 (46%), Gaps = 16/149 (10%)
Query: 41 VVGFDVKF------NSQTRIAEMLILSAANLCLAIQLCRLSRIPESVTNFLADRTICFVG 94
V+GFD ++ + ++A + + SA LC+ +Q+ RL IP+ +++ L + I VG
Sbjct: 45 VLGFDCEWWCTSSMGNNRKVALLQLASAGGLCILVQMTRLHSIPQELSDLLHNDRILKVG 104
Query: 95 FGVDKKTASIHGKTGYPRNCDTGIDLGHLAARVLKKPKLIGLTGIAELAKEVGIDHNSLS 154
G +H G +DL LA R L P G+ +A+ +G + +
Sbjct: 105 IGPLADGIKLHQDYGLALR--GTMDLQTLAQR-LDVPVPYGMKALAK--SVLGFEMDKKK 159
Query: 155 NKEIEAVTPPNWNAWVFTDKQVLHAVEEA 183
N V NW + T +Q+ +A ++A
Sbjct: 160 N-----VILSNWERPLLTKRQIDYASKDA 183
>gi|115436116|ref|NP_001042816.1| Os01g0300000 [Oryza sativa Japonica Group]
gi|14495214|dbj|BAB60933.1| unknown protein [Oryza sativa Japonica Group]
gi|15623802|dbj|BAB67862.1| unknown protein [Oryza sativa Japonica Group]
gi|113532347|dbj|BAF04730.1| Os01g0300000 [Oryza sativa Japonica Group]
gi|125525536|gb|EAY73650.1| hypothetical protein OsI_01539 [Oryza sativa Indica Group]
gi|125570051|gb|EAZ11566.1| hypothetical protein OsJ_01433 [Oryza sativa Japonica Group]
gi|215686527|dbj|BAG88780.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 201
Score = 45.8 bits (107), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 40/164 (24%), Positives = 73/164 (44%), Gaps = 18/164 (10%)
Query: 41 VVGFDVKFNSQ------TRIAEMLILSAANLCLAIQLCRLSRIPESVTNFLADRTICFVG 94
+VG D ++ +++A + + + CL +QL +R+P +V + L D ++ VG
Sbjct: 46 IVGLDCEWKPNHVSWKTSKVAVLQLCAGERFCLVLQLFYANRVPPAVADLLGDPSVRLVG 105
Query: 95 FGVDKKTASIHGKTGYPRNCDTGIDLGHLAARVLKKPKLIGLT---GIAELAKEVGIDHN 151
GV + A + G C +DL R L L+G G+ A+EV
Sbjct: 106 IGVGEDAAKLEADYGV--WCAAPVDLEDACNRRL---GLVGTGRRLGLKGYAREV----L 156
Query: 152 SLSNKEIEAVTPPNWNAWVFTDKQVLHAVEEARGCYIVADKLLS 195
++ ++ VT NW QV +A +A Y + +++L+
Sbjct: 157 GMAMEKPRRVTMSNWEKRELDPAQVEYACIDAYVSYKLGERVLA 200
>gi|350403861|ref|XP_003486927.1| PREDICTED: exonuclease 3'-5' domain-containing protein 2-like
[Bombus impatiens]
Length = 609
Score = 45.8 bits (107), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 39/154 (25%), Positives = 75/154 (48%), Gaps = 12/154 (7%)
Query: 41 VVGFDVKFNSQTRIAEMLILSAANLCLAIQLCRLSRIPESVTNFLADRTICFVGFGVDKK 100
V+GFD ++ ++ ++ + + + +C ++ ++ IP+ + + LA++ I VG +
Sbjct: 85 VLGFDCEWVNEGSVSLLQLATFNGVCGLFRIGKIGYIPQKLKDLLANKDILKVGVASYED 144
Query: 101 TASIHGKTGYPRNCDTGIDLGHLAARV-LKKPKLIGLTGIAELAKEVGIDHNSLSNKEIE 159
I G + IDL LAARV L P+ + + L E+ +K IE
Sbjct: 145 GQKILADYGC--RVSSTIDLRTLAARVKLPSPQSLAAMSLQYLGLEM--------DKLIE 194
Query: 160 AVTPPNWNAWVFTDKQVLHAVEEARGCYIVADKL 193
+ NW+A TD+QV +A +A ++ D++
Sbjct: 195 -IRCGNWDAGTLTDEQVAYAACDAIASVLIYDQI 227
>gi|357451275|ref|XP_003595914.1| Werner syndrome ATP-dependent helicase [Medicago truncatula]
gi|355484962|gb|AES66165.1| Werner syndrome ATP-dependent helicase [Medicago truncatula]
Length = 268
Score = 45.8 bits (107), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 48/175 (27%), Positives = 78/175 (44%), Gaps = 19/175 (10%)
Query: 17 VIDDADVIDKKISELSGMLFKMRRVVGFDVKF--NSQTRIAE---MLILSAANLCLAIQL 71
V D ++D +S LS R +VG DV++ N Q + +L L CL Q+
Sbjct: 20 VTHDPSMVDCWLSTLSQTSRSRRFLVGLDVEWLPNRQRNVENPVAVLQLCIKKKCLVFQI 79
Query: 72 CRLSRIPESVTNFLADRTICFVGFGVDKKTASIHGKTGYPRNCDTGIDLGHLAARVLKKP 131
S +P+S+ FL + FVG GV++ + Y ++L +LAA +
Sbjct: 80 LHASFVPQSLVAFLENEDNTFVGVGVEEDVGKL--LRDYSLVVANFVELRNLAAERFGEH 137
Query: 132 KLIGLTGIAELAKEVGIDHNSLSNKEIE---AVTPPNWNAWVFTDKQVLHAVEEA 183
G G+ LA S+ K++E +T WN++ T +QV +A +A
Sbjct: 138 MRCG--GLKALAL-------SVLGKDLEKPRKITMSRWNSFRLTPQQVQYACIDA 183
>gi|326498999|dbj|BAK05990.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 212
Score = 45.8 bits (107), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 45/162 (27%), Positives = 71/162 (43%), Gaps = 17/162 (10%)
Query: 41 VVGFDVKFN-----SQTRIAEMLILSAANLCLAIQLCRLSRIPESVTNFLADRTICFVGF 95
+VG DV++ +Q +A +L L CL QL IP ++ FLAD FVG
Sbjct: 47 IVGLDVEWRPSFGRAQNPVA-LLQLCVGRRCLIFQLLHADFIPLALRRFLADPDFRFVGV 105
Query: 96 GVDKKTASIHGKTGYPRNCDTGIDLGHLAARVLKKPKL--IGLTGIAELAKEVGIDHNSL 153
GV ++ G +DL LAA +++P L GL +A + +
Sbjct: 106 GVQNDVDRLNDDHGL--EVANVVDLRSLAADEMRRPWLRQAGLKDVAGVVMGANL----- 158
Query: 154 SNKEIEAVTPPNWNAWVFTDKQVLHAVEEARGCYIVADKLLS 195
+ VT W+A + +Q+ +A +A + V KLL+
Sbjct: 159 --HKPRRVTMGPWDACRLSQEQIQYACIDAFVSFEVGRKLLT 198
>gi|226533262|ref|NP_001141102.1| uncharacterized protein LOC100273185 [Zea mays]
gi|194702630|gb|ACF85399.1| unknown [Zea mays]
gi|413950814|gb|AFW83463.1| hypothetical protein ZEAMMB73_986096 [Zea mays]
Length = 202
Score = 45.4 bits (106), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 43/161 (26%), Positives = 67/161 (41%), Gaps = 15/161 (9%)
Query: 41 VVGFDVK----FNSQTRIAEMLILSAANLCLAIQLCRLSRIPESVTNFLADRTICFVGFG 96
+VG DV+ F L L + CL QL +P ++ FL DR I FVG G
Sbjct: 48 IVGLDVEWRPSFGPHQNPVATLQLCVGHSCLIFQLLYADYVPGALAEFLGDRGIRFVGVG 107
Query: 97 VDKKTASIHGKTGYPRNCDTGIDLGHLAARVLKKPKL--IGLTGIAELAKEVGIDHNSLS 154
V+ + G DL AA + +P L GL + ++ V +
Sbjct: 108 VEADAERLSDDHGLV--VANAEDLRGRAAERMNRPDLRQAGLRALVQVVMGVNL------ 159
Query: 155 NKEIEAVTPPNWNAWVFTDKQVLHAVEEARGCYIVADKLLS 195
+ + VT W+A + +Q+ +A +A + VA +LL
Sbjct: 160 -VKPQRVTMSRWDASCLSYEQIKYACIDAFVSFEVARRLLG 199
>gi|195625840|gb|ACG34750.1| hypothetical protein [Zea mays]
Length = 202
Score = 45.4 bits (106), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 43/161 (26%), Positives = 67/161 (41%), Gaps = 15/161 (9%)
Query: 41 VVGFDVK----FNSQTRIAEMLILSAANLCLAIQLCRLSRIPESVTNFLADRTICFVGFG 96
+VG DV+ F L L + CL QL +P ++ FL DR I FVG G
Sbjct: 48 IVGLDVEWRPSFGPHXNPVATLQLCVGHSCLIFQLLYADYVPGALAEFLGDRGIRFVGVG 107
Query: 97 VDKKTASIHGKTGYPRNCDTGIDLGHLAARVLKKPKL--IGLTGIAELAKEVGIDHNSLS 154
V+ + G DL AA + +P L GL + ++ V +
Sbjct: 108 VEADAERLSDDHGLV--VANAEDLRGRAAERMNRPDLRQAGLRALVQVVMGVNL------ 159
Query: 155 NKEIEAVTPPNWNAWVFTDKQVLHAVEEARGCYIVADKLLS 195
+ + VT W+A + +Q+ +A +A + VA +LL
Sbjct: 160 -VKPQRVTMSRWDASCLSYEQIKYACIDAFVSFEVARRLLG 199
>gi|375256792|ref|YP_005015959.1| 3'-5' exonuclease [Tannerella forsythia ATCC 43037]
gi|363407096|gb|AEW20782.1| 3'-5' exonuclease [Tannerella forsythia ATCC 43037]
Length = 198
Score = 45.1 bits (105), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 48/198 (24%), Positives = 77/198 (38%), Gaps = 40/198 (20%)
Query: 3 IYELEIKDVKFKVSVIDDADVIDKKISELSGMLFKMRRVVGFDV------KFNSQTRIAE 56
I L ++ + V+D + + + + LS R VGFD K N ++A
Sbjct: 15 IVTLPVESFPGHIVVVDRPEEVGQAVRILSA-----SRCVGFDTETRPSFKKNQHHKVA- 68
Query: 57 MLILSAANLCLAIQLCRLSRIPESVTNFLADRTICFVGFGVDKKTASIHGKTGYPRNCDT 116
++ LS N+C +L L IPE + FL D I +G +
Sbjct: 69 LMQLSTENVCYLFRLNHLGGIPEPLIAFLKDERITKIGLSLP------------------ 110
Query: 117 GIDLGHLAARVLKKPKLIGLTGIAELAKEVGIDHNSLSN-------KEIEAVTP-PNWNA 168
D H+ +K + G + ++ GI+ SL K+I T NW+A
Sbjct: 111 --DDFHMMRERVKDLRPAGFIDLQKIMPSYGIEEASLQKIYAILFGKKISKRTRLTNWDA 168
Query: 169 WVFTDKQVLHAVEEARGC 186
+ TD Q +A +A C
Sbjct: 169 DILTDAQQNYAALDAWAC 186
>gi|363540164|ref|YP_004894512.1| mg461 gene product [Megavirus chiliensis]
gi|350611329|gb|AEQ32773.1| putative 3'-5' exonuclease [Megavirus chiliensis]
Length = 397
Score = 45.1 bits (105), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 39/185 (21%), Positives = 85/185 (45%), Gaps = 13/185 (7%)
Query: 15 VSVIDDADVIDKKISELSGMLFKMRRVVGFDVK--FNSQTRIAEMLILSAANLCLAIQLC 72
++V D+++ID+ I + + + +GFD + + ++ LS ++ L +Q+
Sbjct: 116 ITVSSDSNIIDQWIK--TNIYDYSVKHIGFDTETFMTGKAEKISIIQLSTIDVDLIVQVN 173
Query: 73 RLSRIPESVTNFLADRTICFVGFGVDKKTASIHGKTGYPRNCDTGIDLGHLAARVLKK-- 130
++ +P +T L+D I +G + +I P + +DL L+ +L
Sbjct: 174 KMDSLPTELTRLLSDPEIIKIGVSIRDDMMAILKYFPNPL-IQSVLDLSDLSKDILDNLD 232
Query: 131 -PKLIGLTGIAELAKEVGIDHNSLSNKEIEAVTPPNWNAWVFTDKQVLHAVEEARGCYIV 189
IGL +A + + L +K++ + +WNA T KQ+ +AV ++ ++
Sbjct: 233 NKNNIGLKTLAVITMNIY-----LPDKDLSEIKKSDWNAETLTQKQIEYAVTDSYISLMI 287
Query: 190 ADKLL 194
K++
Sbjct: 288 YYKMI 292
>gi|289743943|gb|ADD20719.1| putative 3'-5' exonuclease [Glossina morsitans morsitans]
Length = 514
Score = 44.7 bits (104), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 41/153 (26%), Positives = 69/153 (45%), Gaps = 25/153 (16%)
Query: 40 RVVGFDVKFNSQTRIAE---MLILSAAN-LCLAIQLCRLSRIPESVTNFLADRTICFVGF 95
+V+GFD ++ + R+ +L L++ N C +LC + IPES+ N LAD+ I +
Sbjct: 80 KVLGFDCEWITIGRVRRPVALLQLASPNGFCGLFRLCHMDHIPESLKNLLADKDI--IKV 137
Query: 96 GVDKKTASIHGKTGYPRNCDTGIDLGHLAARVLKKPKLIGLTGIAELAKEVGIDHNSLSN 155
GVD + + Y + D+ +LA + KP +G++ S S
Sbjct: 138 GVDPAGDARKLRADYGIYVASTFDIRYLAVMIRCKP--------------LGLEKLSRSL 183
Query: 156 KEIEAVTP-----PNWNAWVFTDKQVLHAVEEA 183
++ V P NW D QV +A ++A
Sbjct: 184 LNVDFVKPWYIARSNWEFDKLDDDQVEYAAKDA 216
>gi|15227581|ref|NP_181155.1| polynucleotidyl transferase, ribonuclease H-like protein
[Arabidopsis thaliana]
gi|4678223|gb|AAD26968.1| hypothetical protein [Arabidopsis thaliana]
gi|50058835|gb|AAT69162.1| hypothetical protein At2g36110 [Arabidopsis thaliana]
gi|330254113|gb|AEC09207.1| polynucleotidyl transferase, ribonuclease H-like protein
[Arabidopsis thaliana]
Length = 239
Score = 44.7 bits (104), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 25/56 (44%), Positives = 31/56 (55%), Gaps = 2/56 (3%)
Query: 41 VVGFDVKFN--SQTRIAEMLILSAANLCLAIQLCRLSRIPESVTNFLADRTICFVG 94
VVG DV++ ++L L N CL IQL RIPE + +FL D TI FVG
Sbjct: 57 VVGLDVQWTPGGSDPPPDILQLCVGNRCLIIQLSHCKRIPEVLRSFLEDETITFVG 112
>gi|21805698|gb|AAM76756.1| hypothetical protein [Arabidopsis thaliana]
Length = 239
Score = 44.7 bits (104), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 25/56 (44%), Positives = 31/56 (55%), Gaps = 2/56 (3%)
Query: 41 VVGFDVKFN--SQTRIAEMLILSAANLCLAIQLCRLSRIPESVTNFLADRTICFVG 94
VVG DV++ ++L L N CL IQL RIPE + +FL D TI FVG
Sbjct: 57 VVGLDVQWTPGGSDPPPDILQLCVGNRCLIIQLSHCKRIPEVLRSFLEDETITFVG 112
>gi|312375236|gb|EFR22650.1| hypothetical protein AND_14417 [Anopheles darlingi]
Length = 782
Score = 44.3 bits (103), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 47/174 (27%), Positives = 83/174 (47%), Gaps = 16/174 (9%)
Query: 14 KVSVIDDADVIDKKISELSGMLFKMRRVVGFDVKFNS---QTRIAEMLIL-SAANLCLAI 69
+V +I+ AD +S+L + + V+GFD ++ S Q R +L L S LC I
Sbjct: 51 QVHIINTADECRLIVSKLHRHCQEYK-VLGFDCEWVSNQGQRRPVALLQLASHRGLCALI 109
Query: 70 QLCRLSRIPESVTNFLADRTICFVGFGVDKKTASIHGKTGYPRNCDTGIDLGHLAARVLK 129
+LC ++++P+ + + L D I VG + + + Y ++ +DL +A R
Sbjct: 110 RLCMINKLPQELYDLLNDDNIIKVGVSPYEDARLL--REDYKLKVESTLDLRFMAERAGL 167
Query: 130 KPKLIGLTGIAELAKEVGIDHNSLSNKEIEAVTPPNWNAWVFTDKQVLHAVEEA 183
+P GIA LA EV L+ + + +W A +D+Q+ +A +A
Sbjct: 168 EP-----FGIARLANEV----LGLTLDKHWKIRCSDWEAPDLSDRQIKYAASDA 212
>gi|356523231|ref|XP_003530245.1| PREDICTED: Werner Syndrome-like exonuclease-like [Glycine max]
Length = 238
Score = 44.3 bits (103), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 52/167 (31%), Positives = 73/167 (43%), Gaps = 21/167 (12%)
Query: 41 VVGFDVKF------NSQTRIAEMLILSAANLCLAIQLCRLSRIPESVTNFLADRTICFVG 94
VG D+++ N Q +A L L A CL Q+ IP S+ +FLAD I FVG
Sbjct: 84 TVGLDIEWRPNTQRNMQNPVA-TLQLCVAERCLVFQILHSPSIPPSLVSFLADPNITFVG 142
Query: 95 FGVDKKTASIHGKTGYPRNCDTGIDLGHLAARVLKKPKL--IGLTGIAELAKEVGIDHNS 152
G+ + + Y N DL AA L +L GL K +G+
Sbjct: 143 VGIQEDMEKL--LEDYNLNVANVRDLRSFAAERLGDLELKRAGL-------KSLGLRVLG 193
Query: 153 LSNKEIEAVTPPNW-NAWVFTDKQVLHAVEEARGCYIVADKLLSLLN 198
L + + VT W N W+ T +QV +A +A Y + D+ LS N
Sbjct: 194 LEVAKPKRVTRSRWDNPWL-TAQQVQYAAVDAFLSYEI-DRRLSSYN 238
>gi|242054357|ref|XP_002456324.1| hypothetical protein SORBIDRAFT_03g033990 [Sorghum bicolor]
gi|241928299|gb|EES01444.1| hypothetical protein SORBIDRAFT_03g033990 [Sorghum bicolor]
Length = 165
Score = 43.9 bits (102), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 31/114 (27%), Positives = 55/114 (48%), Gaps = 9/114 (7%)
Query: 4 YELEIKDVKFKVSVIDDADVIDKKISELSGMLFKM--RRVVGFDVKFN-SQTRI----AE 56
Y + D ++ D DV+D + E+ + + R VVG DV++ S +R
Sbjct: 15 YMVFFDDDSILTTLTDSGDVVDSWLDEIYRIHRRRLKRLVVGLDVEWRPSYSRYDAPPVA 74
Query: 57 MLILSAANLCLAIQLCRLSRIPESVTNFLADRTICFVGFGVDKKTASIHGKTGY 110
+L + + CL Q+ +P+++ +FLAD + FVG G+ A + + GY
Sbjct: 75 VLQMCVDHRCLVFQILHADYLPDALFDFLADDRLTFVGVGIHGDVAKL--RAGY 126
>gi|357120544|ref|XP_003561987.1| PREDICTED: Werner Syndrome-like exonuclease-like [Brachypodium
distachyon]
Length = 199
Score = 43.5 bits (101), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 38/143 (26%), Positives = 63/143 (44%), Gaps = 15/143 (10%)
Query: 57 MLILSAANLCLAIQLCRLSRIPESVTNFLADRTICFVGFGVDKKTASIHGKTGYPRNCDT 116
+L L CL +Q+ + R+P + +FL D T+ VG GV + + Y C
Sbjct: 65 ILQLCVGTSCLILQMFYVDRVPAGIRSFLGDPTVRCVGIGVGEDCGKL--AVDYGIVCAA 122
Query: 117 GIDL-----GHLAARVLKKPKLIGLTGIAELAKEVGIDHNSLSNKEIEAVTPPNWNAWVF 171
+DL HL R L + +L G+ +E+ L+ + VT NW
Sbjct: 123 PVDLEDRCNQHLGIRSLFRNRL----GLKGYTREI----LGLTMAKPRHVTMSNWETRDL 174
Query: 172 TDKQVLHAVEEARGCYIVADKLL 194
+ QV++A +A Y + ++LL
Sbjct: 175 SVAQVVYACIDAYVSYKLGERLL 197
>gi|371943770|gb|AEX61598.1| putative 3'-5'exonuclease [Megavirus courdo7]
Length = 397
Score = 43.5 bits (101), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 40/185 (21%), Positives = 85/185 (45%), Gaps = 13/185 (7%)
Query: 15 VSVIDDADVIDKKISELSGMLFKMRRVVGFDVK--FNSQTRIAEMLILSAANLCLAIQLC 72
++V D +VID+ I + + + +GFD + + ++ LS ++ L +Q+
Sbjct: 116 ITVSSDCNVIDQWIK--TNIYDYGVKHIGFDTETFMTGKAEKISIIQLSTIDVDLIVQVN 173
Query: 73 RLSRIPESVTNFLADRTICFVGFGVDKKTASIHGKTGYPRNCDTGIDLGHLAARVLKK-- 130
++ +P +T L+D I +G + +I P + +DL L+ +L
Sbjct: 174 KMDSLPTELTRLLSDPEIIKIGVSIRDDMMAILKYFPNPL-IQSVLDLSDLSKDILDNLD 232
Query: 131 -PKLIGLTGIAELAKEVGIDHNSLSNKEIEAVTPPNWNAWVFTDKQVLHAVEEARGCYIV 189
IGL +A + ++ L +K++ + +WNA T KQ+ +AV ++ ++
Sbjct: 233 NKNNIGLKILAVITMDI-----YLPDKDLSEIKKSDWNAETLTQKQIEYAVTDSYISLMI 287
Query: 190 ADKLL 194
K++
Sbjct: 288 YYKMI 292
>gi|405977154|gb|EKC41618.1| Exonuclease 3'-5' domain-containing protein 2 [Crassostrea gigas]
Length = 860
Score = 43.1 bits (100), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 47/182 (25%), Positives = 87/182 (47%), Gaps = 26/182 (14%)
Query: 12 KFKVSVIDDADVIDKKISELSGMLFKMR-RVVGFDVKFNSQTR----IAEMLILSAANLC 66
K KV VI+ ++ + E + K +V+G D ++ S + ++ + + + C
Sbjct: 285 KKKVHVIESPEIWE----EFCHRILKQNIKVIGLDCEWVSHGKRALPVSLLQVATPKGDC 340
Query: 67 LAIQLCRLSRIPESVTNFLADRTICFVGFGV---DKKTASIHGKTGYPRNCDTGIDLGHL 123
++L ++S +PES+ + DR+I VG V KK +G T + C +DL ++
Sbjct: 341 GLVRLSKMSEVPESLHQIMQDRSILKVGVAVVDDGKKLGRDYGIT--VQGC---VDLRYV 395
Query: 124 AARV--LKKPKLIGLTGIAELAKEVGIDHNSLSNKEIEAVTPPNWNAWVFTDKQVLHAVE 181
ARV + K L I + +V I+ ++ AV NW A +T+ Q+ +A +
Sbjct: 396 LARVRGIFNVKTESLREITKEVLDVVIEKDA-------AVRRGNWEAETYTEAQIDYAAK 448
Query: 182 EA 183
+A
Sbjct: 449 DA 450
>gi|260911820|ref|ZP_05918387.1| 3'-5' exonuclease domain protein [Prevotella sp. oral taxon 472
str. F0295]
gi|260634031|gb|EEX52154.1| 3'-5' exonuclease domain protein [Prevotella sp. oral taxon 472
str. F0295]
Length = 207
Score = 43.1 bits (100), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 37/152 (24%), Positives = 68/152 (44%), Gaps = 22/152 (14%)
Query: 51 QTRIAEMLILSAANLCLAIQLCRLSRIPESVTNFLADRTICFVGFGVDKKTASIHGKTGY 110
++ + +L +S +N C +L + P ++ L + T+ VG + S+H + G+
Sbjct: 62 ESHMVSLLQVSTSNTCFLFRLNHIGITP-AILRLLENTTVPMVGLSLHDDMLSLHKRVGF 120
Query: 111 -PRNCDTGIDLGHLAARVLKKPKLIGLTGIAELAKE---VGIDHNSLSNKEIEAVTPPNW 166
P N IDL L+G GI +L+ + + H +S ++ NW
Sbjct: 121 TPGNF---IDL----------QDLVGELGIEDLSLQKLYANLFHQKISKRQ----RLTNW 163
Query: 167 NAWVFTDKQVLHAVEEARGCYIVADKLLSLLN 198
++ V DKQ +A +A C + ++L L N
Sbjct: 164 DSDVLNDKQKAYAALDAWACINLYKEILRLKN 195
>gi|425701351|gb|AFX92513.1| putative 3'-5' exonuclease [Megavirus courdo11]
Length = 397
Score = 43.1 bits (100), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 34/158 (21%), Positives = 72/158 (45%), Gaps = 11/158 (6%)
Query: 42 VGFDVK--FNSQTRIAEMLILSAANLCLAIQLCRLSRIPESVTNFLADRTICFVGFGVDK 99
+GFD + + ++ LS ++ L +Q+ ++ +P +T L+D I +G +
Sbjct: 141 IGFDTEIFMTGKAEKISIIQLSTIDVDLIVQVNKMDSLPTELTRLLSDPEIIKIGVSIRD 200
Query: 100 KTASIHGKTGYPRNCDTGIDLGHLAARVLKK---PKLIGLTGIAELAKEVGIDHNSLSNK 156
+I P + +DL L+ +L IGL +A + ++ L +K
Sbjct: 201 DMMAILKYFPNPL-IQSVLDLSDLSKDILDNLDNKNNIGLKILAVITMDI-----YLPDK 254
Query: 157 EIEAVTPPNWNAWVFTDKQVLHAVEEARGCYIVADKLL 194
++ + +WNA T KQ+ +AV ++ ++ K++
Sbjct: 255 DLSEIKKSDWNAETLTQKQIEYAVTDSYISLMIYYKMI 292
>gi|307108694|gb|EFN56933.1| hypothetical protein CHLNCDRAFT_143460 [Chlorella variabilis]
Length = 328
Score = 42.7 bits (99), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 38/133 (28%), Positives = 66/133 (49%), Gaps = 9/133 (6%)
Query: 57 MLILSAANLCLAIQLCRLSRIPESVTNFLADRTICFVGFGVDKKTA-SIHGKTGYPRNCD 115
++ L++A+ C+ ++ C L P ++NFL D +ICF+G + A +H G+ +CD
Sbjct: 181 LVQLASADTCVLVRTCLLG-FPRELSNFLRDPSICFIGMHWGTQDADKMHDSFGW-HHCD 238
Query: 116 TG---IDLGHLA-ARVLKKPKLIGLTGIAELAKEVGIDHNSLSNKEI-EAVTPPNWNAWV 170
+D G + AR P+ GL G+AE + + + + + VT NW A
Sbjct: 239 FHGGFVDAGTRSMARQAGYPR-PGLKGMAESLFAIDLPKSKKARTYFWKRVTLSNWAAAS 297
Query: 171 FTDKQVLHAVEEA 183
+ QV +A +A
Sbjct: 298 LSGSQVRYAALDA 310
>gi|388513329|gb|AFK44726.1| unknown [Lotus japonicus]
Length = 206
Score = 42.7 bits (99), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 29/115 (25%), Positives = 54/115 (46%), Gaps = 8/115 (6%)
Query: 37 KMRRVVGFDVKFNSQTRIAE-----MLILSAANLCLAIQLCRLSRIPESVTNFLADRTIC 91
K+ +VG D+++ T+ + +L L + CL Q+ IP+S+++FL++
Sbjct: 47 KLPFIVGLDIEWRPNTQAFKNNPVALLQLCVDHRCLVFQIIHAPSIPDSLSSFLSNPQHT 106
Query: 92 FVGFGVDKKTASIHGKTGYPRNCDTGIDLGHLAARVLKKPKLIGLTGIAELAKEV 146
FVG G+ + + +DL LAA V P+++ G+ L + V
Sbjct: 107 FVGVGIQGDVDKLLKDRSF--TVANAVDLRTLAAEVYGDPEMMK-AGLKALTQRV 158
>gi|195644322|gb|ACG41629.1| hypothetical protein [Zea mays]
Length = 202
Score = 42.7 bits (99), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 42/161 (26%), Positives = 65/161 (40%), Gaps = 15/161 (9%)
Query: 41 VVGFDVK----FNSQTRIAEMLILSAANLCLAIQLCRLSRIPESVTNFLADRTICFVGFG 96
+VG DV+ F L L + CL QL +P ++ FL DR I FVG G
Sbjct: 48 IVGLDVEWRPSFGPHQNPVATLQLCVGHSCLIFQLLYADYVPGALAEFLGDRGIRFVGVG 107
Query: 97 VDKKTASIHGKTGYPRNCDTGIDLGHLAARVLKKPKL--IGLTGIAELAKEVGIDHNSLS 154
V+ + G DL A + +P L GL ++ V +
Sbjct: 108 VEADAERLSDDHGL--VVANAEDLRXRXAERMXRPDLRQAGLRAXVQVVMGVNL------ 159
Query: 155 NKEIEAVTPPNWNAWVFTDKQVLHAVEEARGCYIVADKLLS 195
+ + VT W+A + +Q+ +A +A + VA +LL
Sbjct: 160 -VKPQRVTMSRWDASCLSYEQIKYACIDAFVSFEVARRLLG 199
>gi|388515667|gb|AFK45895.1| unknown [Medicago truncatula]
Length = 236
Score = 42.7 bits (99), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 51/111 (45%), Gaps = 8/111 (7%)
Query: 41 VVGFDVKFNS-----QTRIAEMLILSAANLCLAIQLCRLSRIPESVTNFLADRTICFVGF 95
++G D+++ Q+ A L L N CL QL IP + FL++ FVG
Sbjct: 79 IIGLDIEWRPNSQRGQSNPAATLQLYTNNRCLIFQLIHSPSIPTFLFTFLSNPNNRFVGV 138
Query: 96 GVDKKTASIHGKTGYPRNCDTGIDLGHLAARVLKKPKLIGLTGIAELAKEV 146
G++ I Y +DL +LAA VL+ L+ +GI LA+ V
Sbjct: 139 GIESDIEKI--IEDYNLTVANYVDLRNLAADVLEDRDLLR-SGIKTLAERV 186
>gi|320165962|gb|EFW42861.1| predicted protein [Capsaspora owczarzaki ATCC 30864]
Length = 1379
Score = 42.7 bits (99), Expect = 0.083, Method: Composition-based stats.
Identities = 40/168 (23%), Positives = 70/168 (41%), Gaps = 15/168 (8%)
Query: 36 FKMRRVVGFDVKFNSQTR-----IAEMLILSAANLCLAIQLCRLSRIPESVTNFLADRTI 90
F V+GFD ++ + + +A M I S CL Q +P + L D ++
Sbjct: 775 FSKTNVIGFDAEWRPEQKNEFNGVAVMQI-STEEACLLYQRNGPGALPSQLLRLLTDTSV 833
Query: 91 CFVGFGVDKKTASIHGKTGYPRNC--DTGIDLGHLAARVLKKPKLIGLTGIAELAKEVGI 148
VG GV + G P+ + ++LG + V K L G+ LA G+
Sbjct: 834 LKVGVGVADDLKRVQRAFGLPKQTQFEPAVELGTWSRLVFK--DLPTQPGLKSLAAYCGV 891
Query: 149 DHNSLSNKEIEAVTPPNWNAWVFTDKQVLHAVEEARGCYIVADKLLSL 196
N + + +T WN + Q+++AV++A + + +L L
Sbjct: 892 ALN-----KSKRITMSAWNRIPLSTNQLIYAVQDAWISFFIFARLFVL 934
Score = 39.3 bits (90), Expect = 0.78, Method: Composition-based stats.
Identities = 37/174 (21%), Positives = 71/174 (40%), Gaps = 26/174 (14%)
Query: 36 FKMRRVVGFDVKFNSQTRIAE-----MLILSAANLCLAIQLCRLSRIPESVTNFLADRTI 90
F ++G D++++ + + + ++ L+ CL R+ +P + LA+R +
Sbjct: 329 FATTSLIGLDLEWHPEFQAKQFNGVSLIQLATETKCLLYHQPRVESLPSELAKLLANRAV 388
Query: 91 CFVGFGVDKKTASIHGKTGYPRNC--------DTGIDLGHLAARVLKKPKLIGLTGIAEL 142
VG G+ A + R C ++ DLG L+ V L G G+ L
Sbjct: 389 LKVGIGISNDLARLR------RACINSGHVHLESIFDLGALSLLVFS--DLRGAPGLRSL 440
Query: 143 AKEVGIDHNSLSNKEIEAVTPPNWNAWVFTDKQVLHAVEEARGCYIVADKLLSL 196
A G+ N + A W+ Q+++AV++A + + L +L
Sbjct: 441 ATRCGLAINKAKQVSMSA-----WDRIPLNHTQLVYAVQDAWASFFLFACLYAL 489
>gi|402876535|ref|XP_003902017.1| PREDICTED: exonuclease 3'-5' domain-containing protein 2 isoform 1
[Papio anubis]
gi|402876537|ref|XP_003902018.1| PREDICTED: exonuclease 3'-5' domain-containing protein 2 isoform 2
[Papio anubis]
gi|402876539|ref|XP_003902019.1| PREDICTED: exonuclease 3'-5' domain-containing protein 2 isoform 3
[Papio anubis]
gi|402876543|ref|XP_003902021.1| PREDICTED: exonuclease 3'-5' domain-containing protein 2 isoform 5
[Papio anubis]
Length = 620
Score = 42.7 bits (99), Expect = 0.086, Method: Composition-based stats.
Identities = 43/155 (27%), Positives = 74/155 (47%), Gaps = 21/155 (13%)
Query: 41 VVGFDVKF-NSQTRIAEMLIL---SAANLCLAIQLCRL----SRIPESVTNFLADRTICF 92
V+G D ++ N + + + + +L S + LC+ I+L +L +P ++ N LAD TI
Sbjct: 104 VLGIDCEWVNLEGKASPLSLLQMASPSGLCVLIRLPKLICGGKTLPRTLLNILADGTILK 163
Query: 93 VGFGVDKKTASIHGKTGY-PRNCDTGIDLGHLAARVLKKPKLIGLT--GIAELAKEVGID 149
VG G + + + G R C +DL +LA R GL+ +AE +D
Sbjct: 164 VGVGCSEDASKLLQDYGLVVRGC---LDLRYLAMRQRNNLLCNGLSLKSLAETVLNFPLD 220
Query: 150 HNSLSNKEIEAVTPPNWNAWVFTDKQVLHAVEEAR 184
+ L + NW+A T+ QV++A +A+
Sbjct: 221 KSLL-------LRCSNWDAETLTEDQVIYAARDAQ 248
>gi|386782259|ref|NP_001247993.1| exonuclease 3'-5' domain-containing protein 2 [Macaca mulatta]
gi|380814300|gb|AFE79024.1| exonuclease 3'-5' domain-containing protein 2 isoform 1 [Macaca
mulatta]
gi|384947988|gb|AFI37599.1| exonuclease 3'-5' domain-containing protein 2 isoform 1 [Macaca
mulatta]
Length = 620
Score = 42.7 bits (99), Expect = 0.086, Method: Composition-based stats.
Identities = 43/155 (27%), Positives = 74/155 (47%), Gaps = 21/155 (13%)
Query: 41 VVGFDVKF-NSQTRIAEMLIL---SAANLCLAIQLCRL----SRIPESVTNFLADRTICF 92
V+G D ++ N + + + + +L S + LC+ I+L +L +P ++ N LAD TI
Sbjct: 104 VLGIDCEWVNLEGKASPLSLLQMASPSGLCVLIRLPKLICGGKTLPRTLLNILADGTILK 163
Query: 93 VGFGVDKKTASIHGKTGY-PRNCDTGIDLGHLAARVLKKPKLIGLT--GIAELAKEVGID 149
VG G + + + G R C +DL +LA R GL+ +AE +D
Sbjct: 164 VGVGCSEDASKLLQDYGLVVRGC---LDLRYLAMRQRNNLLCNGLSLKSLAETVLNFPLD 220
Query: 150 HNSLSNKEIEAVTPPNWNAWVFTDKQVLHAVEEAR 184
+ L + NW+A T+ QV++A +A+
Sbjct: 221 KSLL-------LRCSNWDAETLTEDQVIYAARDAQ 248
>gi|242058231|ref|XP_002458261.1| hypothetical protein SORBIDRAFT_03g030160 [Sorghum bicolor]
gi|241930236|gb|EES03381.1| hypothetical protein SORBIDRAFT_03g030160 [Sorghum bicolor]
Length = 226
Score = 42.4 bits (98), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 74/163 (45%), Gaps = 16/163 (9%)
Query: 41 VVGFDVKFN--------SQTRIAEMLILSAANLCLAIQLCRLSRIPESVTNFLADRTICF 92
+VG D ++ + R+A +L L + CL Q+ +P+++ +FLA F
Sbjct: 48 IVGLDTEWRIVHDEDGRRKNRMA-VLQLCVGHRCLVYQIFHADYVPDALRDFLACPDHRF 106
Query: 93 VGFGVDKKTASIHGKTGYPRNCDTGIDLGHLAARVLKKPKLIGLTGIAELAKEVGIDHNS 152
+G VD + G DL H+AA VL +P+L + L +EV
Sbjct: 107 LGVAVDGDVKRLSEDCGL--VVADAADLRHVAAEVLARPEL-RTASLKTLTREV---MGV 160
Query: 153 LSNKEIEAVTPPNWNAWVFTDKQVLHAVEEARGCYIVADKLLS 195
L +K ++VT W+A + KQV +A +A Y + LL+
Sbjct: 161 LIDKP-KSVTMSKWDARRLSVKQVQYACVDAFVSYEIGRLLLT 202
>gi|390941796|ref|YP_006405557.1| ribonuclease D [Belliella baltica DSM 15883]
gi|390415224|gb|AFL82802.1| ribonuclease D [Belliella baltica DSM 15883]
Length = 200
Score = 42.4 bits (98), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 46/198 (23%), Positives = 88/198 (44%), Gaps = 27/198 (13%)
Query: 3 IYELEIKDVKFKVSVIDDADVIDKKISELSGMLFKMRRVVGFDVKFNSQTR-----IAEM 57
+ ELE+ ++ +++ D + + + ELS M ++GFD + R +
Sbjct: 11 VNELELGQFDGEIVLVNSMDQVQEVVDELS-----MHDLIGFDTETKPAFRKGVYNYVSL 65
Query: 58 LILSAANLCLAIQLCRLSRIPESVTNFLADRTICFVGFGV--DKKTASIHGKTGYPRNCD 115
L LS +++ I+L + +P+ + + D ++ +G V D + H + P +
Sbjct: 66 LQLSTSDVAFLIRLNEIG-LPKEIQKIMEDPSVLKIGAAVLDDLRALRKHAEDFTPASF- 123
Query: 116 TGIDLGHLAARVLKKPKLIGLTGIAELAKEVGIDHNSLSNKEIEAVTPPNWNAWVFTDKQ 175
DL +V + IG+ +A + E+ I + E V+ NW A T+KQ
Sbjct: 124 --FDLNDQLKKV--GFQNIGVRNLAAMVLEIRISKS-------EQVS--NWEAPTLTEKQ 170
Query: 176 VLHAVEEARGCYIVADKL 193
+L+A +A C + KL
Sbjct: 171 MLYAATDAWVCLEIYKKL 188
>gi|255573515|ref|XP_002527682.1| 3-5 exonuclease, putative [Ricinus communis]
gi|223532913|gb|EEF34681.1| 3-5 exonuclease, putative [Ricinus communis]
Length = 211
Score = 42.4 bits (98), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 69/154 (44%), Gaps = 18/154 (11%)
Query: 41 VVGFDVKFNSQ-TRIAE----MLILSAANLCLAIQLCRLSRIPESVTNFLADRTICFVGF 95
+VG DV++ +R E L L + CL QL RIP+S+ +FL + + F G
Sbjct: 56 IVGLDVEWRPNFSRHIENPVATLQLCIGSRCLIYQLIHSPRIPQSLFDFLKNSSYVFAGV 115
Query: 96 GVDKKTASIHGKTGYPRNCDTGIDLGHLAARVLKKPKLIGLTGIAELAKEVGIDHNSLSN 155
G++ + Y + ++L +AA L +L G+ EL K+V
Sbjct: 116 GIESDVEKL--VEDYGLSVGNVMELRRVAAESLGVKELKN-AGLKELVKQV-------LG 165
Query: 156 KEIEA---VTPPNWNAWVFTDKQVLHAVEEARGC 186
KEI+ VT W++ + QV +A +A C
Sbjct: 166 KEIQKPKRVTMSRWDSMWLSHDQVQYACLDAFVC 199
>gi|198423738|ref|XP_002125788.1| PREDICTED: similar to exonuclease 3-5 domain-like 2 [Ciona
intestinalis]
Length = 572
Score = 42.4 bits (98), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 48/204 (23%), Positives = 97/204 (47%), Gaps = 29/204 (14%)
Query: 4 YELEIKD---VKFKVSVIDDAD-VIDKKISELSGMLFKMRRVVGFDVKFNSQT----RIA 55
Y + KD F +S +D + V+D+ + EL + +V+GFD ++ S++ +A
Sbjct: 47 YNISSKDQDGTTFLLSCPEDLETVLDRFVQEL-----QYAKVIGFDCEWTSKSGKPQPVA 101
Query: 56 EMLILSAANLCLAIQLCRL-SRIPESVTNFLADRTICFVGFG-VDKKTASIHGKTGYPRN 113
+ + + + +CL I+L +P + + L+D + VG G ++ +H
Sbjct: 102 LLQLATVSGVCLLIRLSHYRGPLPVRLQSILSDASYIKVGVGPMEDANKLLHDYGIVVSG 161
Query: 114 CDTGIDLGHLAARVLKKPKLIGLTGIAELAKEVGIDHNSLSNKEIEAVTPPNWNAWVFTD 173
C +DL LA R + +GL G+A+ +G+ N + + A W+A +
Sbjct: 162 C---VDLRSLAVRTKETKNSLGLKGLAQ--SYLGVTMNKQKHIQCSA-----WDAPSLSQ 211
Query: 174 KQVLHAVEEARGCYIVADKLLSLL 197
+Q+ +A +A ++A K+ S++
Sbjct: 212 EQIDYAANDA----LIAAKVFSVI 231
>gi|15795162|dbj|BAB03150.1| unnamed protein product [Arabidopsis thaliana]
Length = 265
Score = 42.4 bits (98), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 19/40 (47%), Positives = 24/40 (60%)
Query: 55 AEMLILSAANLCLAIQLCRLSRIPESVTNFLADRTICFVG 94
A+ L L N C+ IQL R+P+ + NFLADR FVG
Sbjct: 128 ADTLQLCVGNRCIIIQLSHCERVPQVLRNFLADRDYTFVG 167
>gi|15230481|ref|NP_187849.1| DEDDy 3'-5' exonuclease domain-containing protein [Arabidopsis
thaliana]
gi|12321957|gb|AAG51014.1|AC069474_13 hypothetical protein; 77417-78214 [Arabidopsis thaliana]
gi|332641675|gb|AEE75196.1| DEDDy 3'-5' exonuclease domain-containing protein [Arabidopsis
thaliana]
Length = 238
Score = 42.0 bits (97), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 19/40 (47%), Positives = 24/40 (60%)
Query: 55 AEMLILSAANLCLAIQLCRLSRIPESVTNFLADRTICFVG 94
A+ L L N C+ IQL R+P+ + NFLADR FVG
Sbjct: 101 ADTLQLCVGNRCIIIQLSHCERVPQVLRNFLADRDYTFVG 140
>gi|297826051|ref|XP_002880908.1| hypothetical protein ARALYDRAFT_901631 [Arabidopsis lyrata subsp.
lyrata]
gi|297326747|gb|EFH57167.1| hypothetical protein ARALYDRAFT_901631 [Arabidopsis lyrata subsp.
lyrata]
Length = 194
Score = 42.0 bits (97), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 30/110 (27%), Positives = 46/110 (41%), Gaps = 10/110 (9%)
Query: 11 VKFKVSVIDDADVIDKKISELSGMLFKMRRVVGFDV----------KFNSQTRIAEMLIL 60
VK ++ + I++ I L R++G D+ + + A +L L
Sbjct: 11 VKIDTTIATTEEEINEGIQALLSNTSNHNRLIGLDMITFRVAPEPSSTSGKPSNAAILQL 70
Query: 61 SAANLCLAIQLCRLSRIPESVTNFLADRTICFVGFGVDKKTASIHGKTGY 110
+ CL I L L +PES+ NFL F GFG+ AS+ GY
Sbjct: 71 YDSTQCLIIWLHSLHDVPESLYNFLILPAFTFAGFGIKDTIASLKKDYGY 120
>gi|193290152|ref|NP_001123262.1| exonuclease 3'-5' domain-like 2 [Nasonia vitripennis]
Length = 605
Score = 42.0 bits (97), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 38/161 (23%), Positives = 71/161 (44%), Gaps = 22/161 (13%)
Query: 41 VVGFDVKFNSQTRIAEMLILSAANLCLAIQLCRLSRIPESVTNFLADRTICFVG---FGV 97
V+GFD ++ ++ ++ + + + +C +L ++ IP + L+ R + VG F
Sbjct: 86 VLGFDCEWVNEEPVSLLQLATHNGVCALFRLSKIGHIPPKLKELLSSRDLLKVGVASFDD 145
Query: 98 DKKTASIHGKTGYPRNCDT--GIDLGHLAAR-VLKKPKLIGLTGIAELAKEVGIDHNSLS 154
+K A + NC +DL LA R L PK + + L E+
Sbjct: 146 GRKIAKDY-------NCQVVGTVDLRMLAHRHSLPSPKSLAALCVQYLDTEMD------- 191
Query: 155 NKEIEAVTPPNWNAWVFTDKQVLHAVEEARGCYIVADKLLS 195
+I V NWNA T++Q+ +A +A ++ ++L
Sbjct: 192 --KILEVRCSNWNADSLTNEQISYAAHDAYAAVLIYHQILQ 230
>gi|332228976|ref|XP_003263664.1| PREDICTED: exonuclease 3'-5' domain-containing protein 2 isoform 1
[Nomascus leucogenys]
gi|332228978|ref|XP_003263665.1| PREDICTED: exonuclease 3'-5' domain-containing protein 2 isoform 2
[Nomascus leucogenys]
gi|332228980|ref|XP_003263666.1| PREDICTED: exonuclease 3'-5' domain-containing protein 2 isoform 3
[Nomascus leucogenys]
gi|332228982|ref|XP_003263667.1| PREDICTED: exonuclease 3'-5' domain-containing protein 2 isoform 4
[Nomascus leucogenys]
Length = 621
Score = 42.0 bits (97), Expect = 0.13, Method: Composition-based stats.
Identities = 42/155 (27%), Positives = 74/155 (47%), Gaps = 21/155 (13%)
Query: 41 VVGFDVKF-NSQTRIAEMLIL---SAANLCLAIQLCRL----SRIPESVTNFLADRTICF 92
V+G D ++ N + + + + +L S + LC+ ++L +L +P ++ + LAD TI
Sbjct: 104 VLGIDCEWVNLEGKASPLSLLQMASPSGLCVLVRLPKLICGGKTLPRTLLDILADGTILK 163
Query: 93 VGFGVDKKTASIHGKTGYP-RNCDTGIDLGHLAARVLKKPKLIGLT--GIAELAKEVGID 149
VG G + + + G R C +DL +LA R GL+ +AE +D
Sbjct: 164 VGVGCSEDASKLLQDYGLVVRGC---LDLRYLAMRQRNNLLCNGLSLKSLAETVLNFPLD 220
Query: 150 HNSLSNKEIEAVTPPNWNAWVFTDKQVLHAVEEAR 184
+ L + NWNA T+ QV++A +A+
Sbjct: 221 KSLL-------LRCSNWNAETLTEDQVIYAARDAQ 248
>gi|55773858|dbj|BAD72396.1| hypothetical protein [Oryza sativa Japonica Group]
gi|55773956|dbj|BAD72483.1| hypothetical protein [Oryza sativa Japonica Group]
Length = 298
Score = 42.0 bits (97), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 47/164 (28%), Positives = 74/164 (45%), Gaps = 17/164 (10%)
Query: 41 VVGFDVKF------NSQT--RIAEMLILSAANLCLAIQLCRLSR-IPESVTNFLADRTIC 91
+VG D ++ N +T ++A +L L CL Q+ + +P + FLAD ++
Sbjct: 134 IVGIDTEWRTDHLPNGKTCYKVA-VLQLCVGRRCLLFQIYQAGNMVPHELAEFLADPSVR 192
Query: 92 FVGFGVDKKTASIHGKTGYPRNCDTGIDLGHLAARVLKKPKLIGLTGIAELAKEVGIDHN 151
FVG V+ + C +DL + AA VL +P+L G+ LA V H
Sbjct: 193 FVGVAVNNDMQRLANDCNLRVAC--AVDLRYAAAAVLGQPEL-ARAGLKRLALTVMGAH- 248
Query: 152 SLSNKEIEAVTPPNWNAWVFTDKQVLHAVEEARGCYIVADKLLS 195
KE + +T W T +QV +A +A Y + +LLS
Sbjct: 249 --MEKE-KNITKSRWGEPTLTWEQVNYACIDAYVSYEIGRRLLS 289
>gi|125527138|gb|EAY75252.1| hypothetical protein OsI_03140 [Oryza sativa Indica Group]
Length = 357
Score = 42.0 bits (97), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 41/140 (29%), Positives = 62/140 (44%), Gaps = 8/140 (5%)
Query: 57 MLILSAANLCLAIQLCRLSR-IPESVTNFLADRTICFVGFGVDKKTASIHGKTGYPRNCD 115
+L L CL Q+ + +P + FLAD ++ FVG V+ + C
Sbjct: 216 VLQLCVGRRCLVFQIYQAGNMVPHELAEFLADPSVRFVGVAVNNDMQRLANDCNLRVAC- 274
Query: 116 TGIDLGHLAARVLKKPKLIGLTGIAELAKEVGIDHNSLSNKEIEAVTPPNWNAWVFTDKQ 175
+DL + AA VL +P+L G+ LA V H KE + +T W T +Q
Sbjct: 275 -AVDLRYAAAAVLGQPEL-ARAGLKRLALTVMGAH---MEKE-KNITKSRWGEPTLTWEQ 328
Query: 176 VLHAVEEARGCYIVADKLLS 195
V +A +A Y + +LLS
Sbjct: 329 VNYACIDAYVSYEIGRRLLS 348
>gi|334366675|ref|ZP_08515600.1| 3'-5' exonuclease [Alistipes sp. HGB5]
gi|313157179|gb|EFR56609.1| 3'-5' exonuclease [Alistipes sp. HGB5]
Length = 203
Score = 41.6 bits (96), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 49/175 (28%), Positives = 70/175 (40%), Gaps = 40/175 (22%)
Query: 36 FKMRR-VVGFDVKFNSQTRIA-----EMLILSAANLCLAIQLCRLSRIP--ESVTNFLAD 87
F M++ VVGFD + R +L LS LC L RL++IP + + L
Sbjct: 43 FLMKQAVVGFDTETRPSFRPGISYRVSLLQLSTPQLCF---LFRLNKIPLAKPILQVLET 99
Query: 88 RTICFVGFGVDKKTASIHGKTGYPRNCDTGIDLGHLAARVLKKPKLIGLTGIAELAKEVG 147
+I +G D DL L R ++ + G + +A E G
Sbjct: 100 DSILKIG-------------------ADVAGDLRSL--RQIRHFRDGGFVDLQSIAPEWG 138
Query: 148 IDHNSLS--------NKEIEAVTPPNWNAWVFTDKQVLHAVEEARGCYIVADKLL 194
I+ SL + +A NW A TDKQ L+A +A C + DKLL
Sbjct: 139 IEDKSLRKLSAIVLRQRVSKAQRLSNWEAATLTDKQKLYAATDAWVCTAIYDKLL 193
>gi|357442195|ref|XP_003591375.1| hypothetical protein MTR_1g086690 [Medicago truncatula]
gi|355480423|gb|AES61626.1| hypothetical protein MTR_1g086690 [Medicago truncatula]
Length = 274
Score = 41.6 bits (96), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 37/67 (55%), Gaps = 3/67 (4%)
Query: 77 IPESVTNFLADRTICFVGFGVDKKTASIHGKTGYPRNCDTGIDLGHLAARVLKKPKLIGL 136
+ +S+ NFL + FVG G+ + A + + G+ C ++LG AA V+K+P L
Sbjct: 96 VHKSLLNFLRLPNVTFVGVGIKENLAKLEKQYGF--GCRNAVELGPFAASVMKRPHL-SF 152
Query: 137 TGIAELA 143
G+ ELA
Sbjct: 153 CGVDELA 159
>gi|390945448|ref|YP_006409208.1| ribonuclease D [Alistipes finegoldii DSM 17242]
gi|390422017|gb|AFL76523.1| ribonuclease D [Alistipes finegoldii DSM 17242]
Length = 209
Score = 41.6 bits (96), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 66/169 (39%), Gaps = 39/169 (23%)
Query: 41 VVGFDVKFNSQTRIA-----EMLILSAANLCLAIQLCRLSRIP--ESVTNFLADRTICFV 93
VVGFD + R +L LS LC L RL++IP + + L +I +
Sbjct: 55 VVGFDTETRPSFRPGISYRVSLLQLSTPQLCF---LFRLNKIPLAKPILQVLETDSILKI 111
Query: 94 GFGVDKKTASIHGKTGYPRNCDTGIDLGHLAARVLKKPKLIGLTGIAELAKEVGIDHNSL 153
G D DL L R ++ + G + +A E GI+ SL
Sbjct: 112 G-------------------ADVAGDLRSL--RQIRHFRDGGFVDLQSIAPEWGIEDKSL 150
Query: 154 S--------NKEIEAVTPPNWNAWVFTDKQVLHAVEEARGCYIVADKLL 194
+ +A NW A TDKQ L+A +A C + DKLL
Sbjct: 151 RKLSAIVLRQRVSKAQRLSNWEAATLTDKQKLYAATDAWVCTAIYDKLL 199
>gi|15795161|dbj|BAB03149.1| unnamed protein product [Arabidopsis thaliana]
Length = 249
Score = 41.2 bits (95), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 18/40 (45%), Positives = 23/40 (57%)
Query: 55 AEMLILSAANLCLAIQLCRLSRIPESVTNFLADRTICFVG 94
A+ L L N CL IQLC ++P S+ +FL D FVG
Sbjct: 184 ADTLQLCVGNQCLIIQLCHCDQVPTSLRSFLTDPNTTFVG 223
>gi|125571460|gb|EAZ12975.1| hypothetical protein OsJ_02895 [Oryza sativa Japonica Group]
Length = 357
Score = 41.2 bits (95), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 47/164 (28%), Positives = 74/164 (45%), Gaps = 17/164 (10%)
Query: 41 VVGFDVKF------NSQT--RIAEMLILSAANLCLAIQLCRLSR-IPESVTNFLADRTIC 91
+VG D ++ N +T ++A +L L CL Q+ + +P + FLAD ++
Sbjct: 193 IVGIDTEWRTDHLPNGKTCYKVA-VLQLCVGRRCLLFQIYQAGNMVPHELAEFLADPSVR 251
Query: 92 FVGFGVDKKTASIHGKTGYPRNCDTGIDLGHLAARVLKKPKLIGLTGIAELAKEVGIDHN 151
FVG V+ + C +DL + AA VL +P+L G+ LA V H
Sbjct: 252 FVGVAVNNDMQRLANDCNLRVAC--AVDLRYAAAAVLGQPEL-ARAGLKRLALTVMGAH- 307
Query: 152 SLSNKEIEAVTPPNWNAWVFTDKQVLHAVEEARGCYIVADKLLS 195
KE + +T W T +QV +A +A Y + +LLS
Sbjct: 308 --MEKE-KNITKSRWGEPTLTWEQVNYACIDAYVSYEIGRRLLS 348
>gi|164515888|emb|CAP48106.1| putative integron gene cassette protein [uncultured bacterium]
Length = 199
Score = 41.2 bits (95), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 52/115 (45%), Gaps = 10/115 (8%)
Query: 79 ESVTNFLADRTICFVGFGVDKKTASIHGKTGYPRNCDTGIDLGHLAARVLKKPKLIGLTG 138
E + + +TI VGFG+ A I K G + I+L L R+ +P+ +GL
Sbjct: 93 EILAEIIQSKTIIKVGFGLSSDRAPIQRKLGV--KLRSAIELSVLVHRLGYRPR-VGLQS 149
Query: 139 IAELAKEVGIDHNSLSNKEIEAVTPPNWNAWVFTDKQVLHAVEEARGCYIVADKL 193
V I N K + +T NWNA + + +Q+L+A +A V KL
Sbjct: 150 ------AVSIVLNQYLQKS-KKLTLSNWNAKLLSARQILYAANDAYASLQVYSKL 197
>gi|321462436|gb|EFX73459.1| hypothetical protein DAPPUDRAFT_325251 [Daphnia pulex]
Length = 417
Score = 41.2 bits (95), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 74/160 (46%), Gaps = 19/160 (11%)
Query: 41 VVGFDVKF-----NSQTRIAEMLILSAANLCLAIQLCRLSRIPESVTNFLADRTICFVGF 95
++GFD ++ N+Q IA + + S +C +++C LS +PES+ N L + I VG
Sbjct: 38 ILGFDCEWSNVDGNTQP-IALIQLASHQGVCALVRVCCLSTLPESLKNILTNPKILKVGV 96
Query: 96 GVDKKTASIHGKTGYPRNCDTGIDLGHLAARVLKKPKLIGLTGIAELAKEVGIDHNSLSN 155
+ + + G + C G D+ HL + + PK + L + L+ V H S
Sbjct: 97 ATWEDASKLKRDLGI-QFCG-GYDVRHL---IFRHPKRVSLLSKSGLSGTVLNKHFS--- 148
Query: 156 KEIEAVTPPNWNAWVFTDKQVLHAVEEARGCYIVADKLLS 195
V +W A + QV +A ++A + KL++
Sbjct: 149 -----VRCSDWEAENLSTIQVKYAAQDAIASIAICLKLVA 183
>gi|15230500|ref|NP_187852.1| DEDDy 3'-5' exonuclease domain-containing protein [Arabidopsis
thaliana]
gi|12321946|gb|AAG51003.1|AC069474_2 hypothetical protein; 72371-73099 [Arabidopsis thaliana]
gi|15795165|dbj|BAB03153.1| unnamed protein product [Arabidopsis thaliana]
gi|332641677|gb|AEE75198.1| DEDDy 3'-5' exonuclease domain-containing protein [Arabidopsis
thaliana]
Length = 242
Score = 41.2 bits (95), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 26/47 (55%)
Query: 48 FNSQTRIAEMLILSAANLCLAIQLCRLSRIPESVTNFLADRTICFVG 94
F S A+ L L N C+ IQL R+P+ + NFLADR FVG
Sbjct: 94 FYSSDPPADTLQLCVGNRCIIIQLRYCERVPQVLRNFLADRDNTFVG 140
>gi|12321961|gb|AAG51018.1|AC069474_17 hypothetical protein; 78912-79874 [Arabidopsis thaliana]
Length = 308
Score = 41.2 bits (95), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 18/40 (45%), Positives = 23/40 (57%)
Query: 55 AEMLILSAANLCLAIQLCRLSRIPESVTNFLADRTICFVG 94
A+ L L N CL IQLC ++P S+ +FL D FVG
Sbjct: 184 ADTLQLCVGNQCLIIQLCHCDQVPTSLRSFLTDPNTTFVG 223
>gi|363733349|ref|XP_001235033.2| PREDICTED: LOW QUALITY PROTEIN: Werner syndrome ATP-dependent
helicase homolog [Gallus gallus]
Length = 1498
Score = 41.2 bits (95), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 38/164 (23%), Positives = 72/164 (43%), Gaps = 19/164 (11%)
Query: 41 VVGFDVKFNSQTRIAEMLILSAANLCLAIQLCRL------SRIPESVTNFLADRTICFVG 94
VGFD+++ +M ++ LC+ + C L S P+ + L D TI VG
Sbjct: 88 AVGFDIEWPPSYTKGKMAKIALIQLCVTEEKCYLFHISSMSGFPKGLKRLLEDETIKKVG 147
Query: 95 FGVDKKTASIHGKTGYPRNCDTGIDLGHLAARVLKKPKLIGLTGIAE--LAKEVGIDHNS 152
G++ + G + + ++L +A LK ++ L G+ + K++
Sbjct: 148 VGIEGDHWKLMGD--FEVKLKSFVELADVANEKLKCKEVWSLNGLVKHLFGKQL------ 199
Query: 153 LSNKEIEAVTPPNWNAWVFTDKQVLHAVEEARGCYIVADKLLSL 196
L +K I NW + ++Q L+A +A +I+ KL ++
Sbjct: 200 LKDKSIRCG---NWEKFPLDEEQKLYAATDAYAGFIIYQKLKTM 240
>gi|154494239|ref|ZP_02033559.1| hypothetical protein PARMER_03589 [Parabacteroides merdae ATCC
43184]
gi|423724766|ref|ZP_17698908.1| hypothetical protein HMPREF1078_02805 [Parabacteroides merdae
CL09T00C40]
gi|154086101|gb|EDN85146.1| 3'-5' exonuclease [Parabacteroides merdae ATCC 43184]
gi|409236726|gb|EKN29532.1| hypothetical protein HMPREF1078_02805 [Parabacteroides merdae
CL09T00C40]
Length = 193
Score = 41.2 bits (95), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 87/201 (43%), Gaps = 32/201 (15%)
Query: 2 CIYELEIKDVKFKVSVIDDADVIDKKISELSGMLFKMRRVVGFDVK----FNSQTRIA-E 56
I EL +++ ++ VID ++K + LS + VGFD + F R
Sbjct: 13 AISELPLEEFTGRIIVIDTLRDVEKAVGYLSEF-----QSVGFDTETRPSFKKGQRYKIS 67
Query: 57 MLILSAANLCLAIQLCRLSRIPESVTNFLADRTICFVGFGVDKKTASIHGKTG-YPRNCD 115
++ +S C +L R+ IPE++ FLA+ + +G + ++ +T P N
Sbjct: 68 LMQISTDEACFLFRLNRIG-IPEALEEFLANEKVLKIGLSLRDDFGAMRKRTDIQPANF- 125
Query: 116 TGIDLGHLAARVLKKPKLIGLTGI--AELAKEVGIDHNSLSNKEI-EAVTPPNWNAWVFT 172
+DL + +G GI A L K I L NK+I + NW A V +
Sbjct: 126 --LDLQN----------YVGQFGIEDASLQKIYAI----LFNKKISKGQRLSNWEADVLS 169
Query: 173 DKQVLHAVEEARGCYIVADKL 193
D Q +A +A C + ++L
Sbjct: 170 DAQKKYAALDAWACLKIYNQL 190
>gi|15795164|dbj|BAB03152.1| unnamed protein product [Arabidopsis thaliana]
Length = 210
Score = 41.2 bits (95), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 47/188 (25%), Positives = 78/188 (41%), Gaps = 9/188 (4%)
Query: 4 YELEIKDVKFKVSVIDDADVIDKKISE-LSGMLFKMRR-VVGFDVKFNSQTR--IAEMLI 59
Y + + V+V D VI + I + LS F VVG V++ A+ L
Sbjct: 17 YSVNFFGEELTVTVTPDPSVIGQWIHDVLSNNRFSSHPLVVGVGVQWTPPGYDPPADTLQ 76
Query: 60 LSAANLCLAIQLCRLSRIPESVTNFLADRTICFVGFGVDKKTASIHGKTGYPRNCDTGID 119
L N C+ IQL R+P + NFLA FVG + + ++ + D +D
Sbjct: 77 LCVGNRCIIIQLSHCDRVPRVLHNFLAYPDYTFVGVWNSQDARKLE-RSRHQLEIDDLLD 135
Query: 120 LGHLAARVLKKPKLIGLTGIAELAKEVGIDHNSLSNKEIEAVTPPNWNAWVFTDKQVLHA 179
L + + G + + + +G L ++EI +W+A+ D Q+L A
Sbjct: 136 LRKYVEDSSGRRSMRGCSFEVIVEECLGYRGVRL-DREISM---SDWSAYELCDDQILQA 191
Query: 180 VEEARGCY 187
+A C+
Sbjct: 192 SIDAHVCF 199
>gi|194743424|ref|XP_001954200.1| GF18156 [Drosophila ananassae]
gi|190627237|gb|EDV42761.1| GF18156 [Drosophila ananassae]
Length = 586
Score = 41.2 bits (95), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 33/135 (24%), Positives = 58/135 (42%), Gaps = 11/135 (8%)
Query: 40 RVVGFDVKF----NSQTRIAEMLILSAANLCLAIQLCRLSRIPESVTNFLADRTICFVGF 95
+V+GFD ++ S+ +A + + S LC +LC + +IP+ + L D + VG
Sbjct: 78 KVLGFDCEWITVGGSRRPVALLQLSSHQGLCALFRLCHMKQIPKDLRELLEDDAVIKVGV 137
Query: 96 GVDKKTASIHGKTGYPRNCDTGIDLGHLAARVLKKPKLIGLTGIAELAKEVGIDHN---S 152
+ + G + +DL L KP+ +G L + +D N +
Sbjct: 138 APQEDAMKLSHDYGV--GVASTLDLRFLCVMAGHKPEGLGKLSFRHL--DYPLDKNWRLA 193
Query: 153 LSNKEIEAVTPPNWN 167
SN E + + PP N
Sbjct: 194 CSNWEAKQLEPPQLN 208
>gi|238479745|ref|NP_187848.2| DnaQ-like 3'-5' exonuclease domain-containing protein [Arabidopsis
thaliana]
gi|332641674|gb|AEE75195.1| DnaQ-like 3'-5' exonuclease domain-containing protein [Arabidopsis
thaliana]
Length = 185
Score = 40.8 bits (94), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 18/40 (45%), Positives = 23/40 (57%)
Query: 55 AEMLILSAANLCLAIQLCRLSRIPESVTNFLADRTICFVG 94
A+ L L N CL IQLC ++P S+ +FL D FVG
Sbjct: 110 ADTLQLCVGNQCLIIQLCHCDQVPTSLRSFLTDPNTTFVG 149
>gi|321462442|gb|EFX73465.1| hypothetical protein DAPPUDRAFT_325261 [Daphnia pulex]
Length = 474
Score = 40.8 bits (94), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 48/188 (25%), Positives = 87/188 (46%), Gaps = 28/188 (14%)
Query: 14 KVSVIDDA-DVIDKKISELSGMLFKMRRVVGFDVKF-----NSQTRIAEMLILSAANLCL 67
+VS DD V+ K SE+ ++GFD ++ N+Q +A + + S +C
Sbjct: 18 RVSEWDDVYSVLLKHCSEVP--------ILGFDCEWSNVDGNTQP-VALIQLASHQGVCA 68
Query: 68 AIQLCRLSRIPESVTNFLADRTICFVGFGVDKKTASIHGKTGYPRNCDTGIDLGHLAARV 127
+++C LS +PES+ N L + I VG + + + G + C G D+ HL R
Sbjct: 69 LVRVCCLSTLPESLKNILTNPKILKVGVATWEDASKLKRDLGI-QFCG-GYDVRHLIFRH 126
Query: 128 LKKPKLIGLTGIAELAKEVGIDHNSLSNKEIEAVTPPNWNAWVFTDKQVLHAVEEARGCY 187
K+ L+ +G++ ++ NK +V +W A + QV +A ++A
Sbjct: 127 PKRVSLLSKSGLS----------GTVLNKHF-SVRCSDWEAENLSTIQVKYAAQDAIASI 175
Query: 188 IVADKLLS 195
+ KL++
Sbjct: 176 AICLKLVA 183
>gi|73963367|ref|XP_547872.2| PREDICTED: exonuclease 3'-5' domain-containing protein 2 isoform 1
[Canis lupus familiaris]
Length = 623
Score = 40.8 bits (94), Expect = 0.28, Method: Composition-based stats.
Identities = 41/155 (26%), Positives = 75/155 (48%), Gaps = 21/155 (13%)
Query: 41 VVGFDVKF-NSQTRIAEMLIL---SAANLCLAIQLCRL----SRIPESVTNFLADRTICF 92
V+G D ++ NS+ R + + +L S + C+ ++L +L +P+++ + LAD TI
Sbjct: 106 VLGIDCEWVNSEGRASPLSLLQMASPSGFCVLVRLPKLICGGKTLPKTLLDILADGTILK 165
Query: 93 VGFGVDKKTASIHGKTGY-PRNCDTGIDLGHLAARVLKKPKLIGLT--GIAELAKEVGID 149
VG G + + + G + C +DL +LA R GL+ +AE +D
Sbjct: 166 VGVGCSEDASKLLQDYGLVVKGC---LDLRYLAVRQRNNLLCNGLSLKSLAETVLNFPLD 222
Query: 150 HNSLSNKEIEAVTPPNWNAWVFTDKQVLHAVEEAR 184
+ L + NW+A T+ QV++A +A+
Sbjct: 223 KSLL-------LRCSNWDAENLTEDQVIYAARDAQ 250
>gi|356566624|ref|XP_003551530.1| PREDICTED: Werner Syndrome-like exonuclease-like [Glycine max]
Length = 220
Score = 40.8 bits (94), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 45/203 (22%), Positives = 82/203 (40%), Gaps = 18/203 (8%)
Query: 3 IYELEIK----DVKFKVSVIDDADVIDKKISELSGMLFKMRRVVGFDVKF------NSQT 52
+YE+ + D + D + + G+ + +VG DV++ N+Q
Sbjct: 17 LYEVTFQCCHYDTIIHTLLTSDPSRVASWLPNNDGVRRRNNLMVGLDVEWRPNYQPNTQP 76
Query: 53 RIAEMLILSAANLCLAIQLCRLSRIPESVTNFLADRTICFVGFGVDKKTASIHGKTGYPR 112
L L + CL Q+ IP ++ +FLA+ I F G G+ + Y
Sbjct: 77 NPVATLQLCTGHRCLIFQIIHAPSIPAALISFLANPNITFFGVGIRADAEKL--LVDYNL 134
Query: 113 NCDTGIDLGHLAARVLKKPKL--IGLTGIAELAKEVGIDHNSLSNKEIEAVTPPNWNAWV 170
+ DL LA L + + G+A LA+ V ++ ++ + +T W+
Sbjct: 135 HVANVRDLRPLAVERLSRAFYPDVSQAGLATLARHVL----GVAVEKPQWITRSRWDDRR 190
Query: 171 FTDKQVLHAVEEARGCYIVADKL 193
T +QV +A +A Y + +L
Sbjct: 191 LTKEQVQYATIDAFLSYEIGRQL 213
>gi|242042704|ref|XP_002459223.1| hypothetical protein SORBIDRAFT_02g000870 [Sorghum bicolor]
gi|241922600|gb|EER95744.1| hypothetical protein SORBIDRAFT_02g000870 [Sorghum bicolor]
Length = 455
Score = 40.8 bits (94), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 20/71 (28%), Positives = 33/71 (46%), Gaps = 7/71 (9%)
Query: 34 MLFKMRRVVGFDVKFN-------SQTRIAEMLILSAANLCLAIQLCRLSRIPESVTNFLA 86
+ ++ +VG V++ +T + L L + CL L R +PE++ FLA
Sbjct: 55 LFYRGHLIVGLGVQWTPTRAQLRGETPVPATLQLCVGHRCLVFHLARADAVPEALRRFLA 114
Query: 87 DRTICFVGFGV 97
D + FVG G
Sbjct: 115 DPRVTFVGSGA 125
>gi|414881022|tpg|DAA58153.1| TPA: hypothetical protein ZEAMMB73_889185 [Zea mays]
Length = 132
Score = 40.8 bits (94), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 37/86 (43%), Gaps = 4/86 (4%)
Query: 57 MLILSAANLCLAIQLCRLSRIPESVTNFLADRTICFVGFGVDKKTASIHGKTGYPRNCDT 116
+L L CL QL +P ++ FL+D FVG G+ + + Y
Sbjct: 22 ILQLCVGRRCLIFQLLHADYVPNTLDEFLSDPDYTFVGVGMAADVEQL--ENDYDLEVAN 79
Query: 117 GIDLGHLAARVLKKPKL--IGLTGIA 140
DL L A+ + +P L GL GIA
Sbjct: 80 AEDLAELTAKEMGRPDLRNAGLQGIA 105
>gi|167999688|ref|XP_001752549.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162696449|gb|EDQ82788.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 439
Score = 40.8 bits (94), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 45/145 (31%), Positives = 68/145 (46%), Gaps = 12/145 (8%)
Query: 55 AEMLILSAANLCLAIQLCRLSRIPESVTNFLADRTICFVGFGVDKKTASIHGKTGYPRNC 114
A +L LS CL +QL + +P S+ + LA+ I G G+ T + K Y C
Sbjct: 268 AALLQLSLEECCLLVQLRFIDMLPASLKSLLANPNIKMGGVGILADTKKL--KKDYGLIC 325
Query: 115 DTGIDLGHLAARVLKKPKLIGLTGIAELAKEV-GIDHNSLSNKEIEAVTPPNWNAWVFTD 173
++L LA LK L +GIA L ++V G+ + NK VT NW T
Sbjct: 326 AGEVELTTLAVSTLKNTSLKK-SGIATLTEKVLGVPYE--KNKR---VTMSNWENRDLTY 379
Query: 174 KQVLHAVEEARGCYIVADKLLSLLN 198
Q+ +A +A Y + +++LLN
Sbjct: 380 AQIHYAAADAWLSYSI---MMALLN 401
>gi|344273945|ref|XP_003408779.1| PREDICTED: exonuclease 3'-5' domain-containing protein 2-like
[Loxodonta africana]
Length = 619
Score = 40.8 bits (94), Expect = 0.34, Method: Composition-based stats.
Identities = 41/156 (26%), Positives = 76/156 (48%), Gaps = 23/156 (14%)
Query: 41 VVGFDVKF-NSQTRIAEMLIL---SAANLCLAIQLCRLSR----IPESVTNFLADRTICF 92
V+GFD ++ N + R++ + +L S + LC+ ++L +L R +P ++ + LAD I
Sbjct: 102 VLGFDCEWVNLEGRVSPLSLLQMASPSGLCVLLRLPKLIRGGKTLPRTLLDILADGNILK 161
Query: 93 VGFGVDKKTASIHGKTGYPRNCDTGIDLGHLAARVLKKPKLI----GLTGIAELAKEVGI 148
VG G + + + G +DL +LA R ++ L+ L +AE +
Sbjct: 162 VGVGCSEDASKLLEDYGLV--VKGYLDLRYLAMR--QRDSLLCNGLSLKSLAETVLNFPL 217
Query: 149 DHNSLSNKEIEAVTPPNWNAWVFTDKQVLHAVEEAR 184
D + L + NW+A T+ QV++A +A+
Sbjct: 218 DKSLL-------LRCSNWDAENLTEDQVIYAARDAQ 246
>gi|218185470|gb|EEC67897.1| hypothetical protein OsI_35576 [Oryza sativa Indica Group]
Length = 186
Score = 40.4 bits (93), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 38/140 (27%), Positives = 60/140 (42%), Gaps = 8/140 (5%)
Query: 57 MLILSAANLCLAIQLCRLS-RIPESVTNFLADRTICFVGFGVDKKTASIHGKTGYPRNCD 115
+L L CL QL + S +P + FLAD + FVG GVD + + C
Sbjct: 45 VLQLCVNRRCLVFQLYQASNEVPRELAEFLADAGVRFVGIGVDGGVRRLANECNLRVACT 104
Query: 116 TGIDLGHLAARVLKKPKLIGLTGIAELAKEVGIDHNSLSNKEIEAVTPPNWNAWVFTDKQ 175
+DL +AA VL P+L G+ LA V ++ + +T W T +Q
Sbjct: 105 --VDLSDVAAAVLGWPEL-ARAGLKSLALIV----MGTRMEKAKDITMSRWGEPTLTWEQ 157
Query: 176 VLHAVEEARGCYIVADKLLS 195
+ + + Y + ++LS
Sbjct: 158 INYTCIDVYMSYEIGRRMLS 177
>gi|451927487|gb|AGF85365.1| exonuclease [Moumouvirus goulette]
Length = 407
Score = 40.4 bits (93), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 37/166 (22%), Positives = 77/166 (46%), Gaps = 12/166 (7%)
Query: 37 KMRRVVGFDVKFNSQTRIAE--MLILSAANLCLAIQLCRLSRIPESVTNFLADRTICFVG 94
K + +GFD + N ++ + ++ +S+ L +Q+ +++ +PE + +D I +G
Sbjct: 139 KKVKFIGFDTETNITGKVEKPSIIQISSNEKNLIVQINKMTTLPEKLYELFSDSNIIKIG 198
Query: 95 FGVDKKTASIHGKTGYPRNCDTGIDLGHLAA-----RVLKKPKLIGLTGIAELAKEVGID 149
+ +I + + +DL LA + K IGL +A A +G+
Sbjct: 199 VSIKNDANNITKYFSELKCMKSVLDLSDLAKIFIPNKFENKINDIGLKTLA--AYILGV- 255
Query: 150 HNSLSNKEIEAVTPPNWNAWVFTDKQVLHAVEEARGCYIVADKLLS 195
+ NK++ V NWN + T QV +A+ ++ + +KL++
Sbjct: 256 --YVENKDLCDVKKSNWNDEILTIDQVNYAITDSWISLEMFNKLVT 299
>gi|390366383|ref|XP_797941.3| PREDICTED: exonuclease 3'-5' domain-containing protein 2-like
[Strongylocentrotus purpuratus]
Length = 570
Score = 40.4 bits (93), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 48/188 (25%), Positives = 84/188 (44%), Gaps = 15/188 (7%)
Query: 3 IYELEIKDVK-FKVSVIDDADVIDKKISELSGMLFKMRRVVGFDVKF---NSQTRIAEML 58
IY+ + DV+ + + VID + K + + +M+ V+G D ++ + Q + +L
Sbjct: 44 IYQ-PVTDVENYDIFVIDSSSAYHKAVESFAEATKQMK-VIGLDCEWVTKDGQRQPVALL 101
Query: 59 ILSAA--NLCLAIQLCRLS-RIPESVTNFLADRTICFVGFGVDKKTASIHGKTGYPRNCD 115
LS+ CL +L +L +PES+ L DR VG GV + Y
Sbjct: 102 QLSSPVNQSCLLFRLDQLDGELPESILTILQDRNTLKVGVGVIGDAKRL--LNDYQIITH 159
Query: 116 TGIDLGHLAARVLKKPKLIGLTGIAELAKEVGIDHNSLSNKEIEAVTPPNWNAWVFTDKQ 175
+DL HLA R L + + ELA + + H + + +W A + +Q
Sbjct: 160 GCLDLRHLALRHLSRTLRGRSLSLRELAS-IVLQHEMAKDDRVRC---GDWEAVPLSKEQ 215
Query: 176 VLHAVEEA 183
+ +AV++A
Sbjct: 216 IHYAVDDA 223
>gi|426377284|ref|XP_004055398.1| PREDICTED: exonuclease 3'-5' domain-containing protein 2 isoform 1
[Gorilla gorilla gorilla]
gi|426377286|ref|XP_004055399.1| PREDICTED: exonuclease 3'-5' domain-containing protein 2 isoform 2
[Gorilla gorilla gorilla]
gi|426377288|ref|XP_004055400.1| PREDICTED: exonuclease 3'-5' domain-containing protein 2 isoform 3
[Gorilla gorilla gorilla]
gi|426377290|ref|XP_004055401.1| PREDICTED: exonuclease 3'-5' domain-containing protein 2 isoform 4
[Gorilla gorilla gorilla]
Length = 621
Score = 40.0 bits (92), Expect = 0.47, Method: Composition-based stats.
Identities = 41/155 (26%), Positives = 74/155 (47%), Gaps = 21/155 (13%)
Query: 41 VVGFDVKF-NSQTRIAEMLIL---SAANLCLAIQLCRL----SRIPESVTNFLADRTICF 92
V+G D ++ N + + + + +L S + LC+ ++L +L +P ++ + LAD TI
Sbjct: 104 VLGIDCEWVNLEGKASPLSLLQMASPSGLCVLVRLPKLICGGKTLPRTLLDILADGTILK 163
Query: 93 VGFGVDKKTASIHGKTGY-PRNCDTGIDLGHLAARVLKKPKLIGLT--GIAELAKEVGID 149
VG G + + + G R C +DL +LA R GL+ +AE +D
Sbjct: 164 VGVGCSEDASKLLQDYGLVVRGC---LDLRYLAMRQRNNLLCNGLSLKSLAETVLNFPLD 220
Query: 150 HNSLSNKEIEAVTPPNWNAWVFTDKQVLHAVEEAR 184
+ L + NW+A T+ QV++A +A+
Sbjct: 221 KSLL-------LRCSNWDAETLTEDQVIYAARDAQ 248
>gi|410252096|gb|JAA14015.1| exonuclease 3'-5' domain containing 2 [Pan troglodytes]
Length = 621
Score = 40.0 bits (92), Expect = 0.47, Method: Composition-based stats.
Identities = 41/155 (26%), Positives = 74/155 (47%), Gaps = 21/155 (13%)
Query: 41 VVGFDVKF-NSQTRIAEMLIL---SAANLCLAIQLCRL----SRIPESVTNFLADRTICF 92
V+G D ++ N + + + + +L S + LC+ ++L +L +P ++ + LAD TI
Sbjct: 104 VLGIDCEWVNLEGKASPLSLLQMASPSGLCVLVRLPKLICGGKTLPRTLLDILADGTILK 163
Query: 93 VGFGVDKKTASIHGKTGY-PRNCDTGIDLGHLAARVLKKPKLIGLT--GIAELAKEVGID 149
VG G + + + G R C +DL +LA R GL+ +AE +D
Sbjct: 164 VGVGCSEDASKLLQDYGLVVRGC---LDLRYLAMRQRNNLLCNGLSLKSLAETVLNFPLD 220
Query: 150 HNSLSNKEIEAVTPPNWNAWVFTDKQVLHAVEEAR 184
+ L + NW+A T+ QV++A +A+
Sbjct: 221 KSLL-------LRCSNWDAETLTEDQVIYAARDAQ 248
>gi|397507299|ref|XP_003824138.1| PREDICTED: exonuclease 3'-5' domain-containing protein 2 isoform 1
[Pan paniscus]
gi|397507301|ref|XP_003824139.1| PREDICTED: exonuclease 3'-5' domain-containing protein 2 isoform 2
[Pan paniscus]
gi|397507303|ref|XP_003824140.1| PREDICTED: exonuclease 3'-5' domain-containing protein 2 isoform 3
[Pan paniscus]
gi|397507305|ref|XP_003824141.1| PREDICTED: exonuclease 3'-5' domain-containing protein 2 isoform 4
[Pan paniscus]
Length = 621
Score = 40.0 bits (92), Expect = 0.47, Method: Composition-based stats.
Identities = 41/155 (26%), Positives = 74/155 (47%), Gaps = 21/155 (13%)
Query: 41 VVGFDVKF-NSQTRIAEMLIL---SAANLCLAIQLCRL----SRIPESVTNFLADRTICF 92
V+G D ++ N + + + + +L S + LC+ ++L +L +P ++ + LAD TI
Sbjct: 104 VLGIDCEWVNLEGKASPLSLLQMASPSGLCVLVRLPKLICGGKTLPRTLLDILADGTILK 163
Query: 93 VGFGVDKKTASIHGKTGY-PRNCDTGIDLGHLAARVLKKPKLIGLT--GIAELAKEVGID 149
VG G + + + G R C +DL +LA R GL+ +AE +D
Sbjct: 164 VGVGCSEDASKLLQDYGLIVRGC---LDLRYLAMRQRNNLLCNGLSLKSLAETVLNFPLD 220
Query: 150 HNSLSNKEIEAVTPPNWNAWVFTDKQVLHAVEEAR 184
+ L + NW+A T+ QV++A +A+
Sbjct: 221 KSLL-------LRCSNWDAETLTEDQVIYAARDAQ 248
>gi|297695392|ref|XP_002824927.1| PREDICTED: exonuclease 3'-5' domain-containing protein 2 isoform 1
[Pongo abelii]
gi|297695394|ref|XP_002824928.1| PREDICTED: exonuclease 3'-5' domain-containing protein 2 isoform 2
[Pongo abelii]
gi|297695396|ref|XP_002824929.1| PREDICTED: exonuclease 3'-5' domain-containing protein 2 isoform 3
[Pongo abelii]
gi|395746023|ref|XP_003778376.1| PREDICTED: exonuclease 3'-5' domain-containing protein 2 [Pongo
abelii]
Length = 621
Score = 40.0 bits (92), Expect = 0.47, Method: Composition-based stats.
Identities = 41/155 (26%), Positives = 74/155 (47%), Gaps = 21/155 (13%)
Query: 41 VVGFDVKF-NSQTRIAEMLIL---SAANLCLAIQLCRL----SRIPESVTNFLADRTICF 92
V+G D ++ N + + + + +L S + LC+ ++L +L +P ++ + LAD TI
Sbjct: 104 VLGIDCEWVNLEGKASPLSLLQMASPSGLCVLVRLPKLICGGKTLPRTLLDILADGTILK 163
Query: 93 VGFGVDKKTASIHGKTGY-PRNCDTGIDLGHLAARVLKKPKLIGLT--GIAELAKEVGID 149
VG G + + + G R C +DL +LA R GL+ +AE +D
Sbjct: 164 VGVGCSEDASKLLQDYGLVVRGC---LDLRYLAMRQRNNLLCNGLSLKSLAETVLNFPLD 220
Query: 150 HNSLSNKEIEAVTPPNWNAWVFTDKQVLHAVEEAR 184
+ L + NW+A T+ QV++A +A+
Sbjct: 221 KSLL-------LRCSNWDAETLTEDQVIYAARDAQ 248
>gi|194380670|dbj|BAG58488.1| unnamed protein product [Homo sapiens]
Length = 621
Score = 40.0 bits (92), Expect = 0.47, Method: Composition-based stats.
Identities = 41/155 (26%), Positives = 74/155 (47%), Gaps = 21/155 (13%)
Query: 41 VVGFDVKF-NSQTRIAEMLIL---SAANLCLAIQLCRL----SRIPESVTNFLADRTICF 92
V+G D ++ N + + + + +L S + LC+ ++L +L +P ++ + LAD TI
Sbjct: 104 VLGIDCEWVNLEGKASPLSLLQMASPSGLCVLVRLPKLICGGKTLPRTLLDILADGTILK 163
Query: 93 VGFGVDKKTASIHGKTGY-PRNCDTGIDLGHLAARVLKKPKLIGLT--GIAELAKEVGID 149
VG G + + + G R C +DL +LA R GL+ +AE +D
Sbjct: 164 VGVGCSEDASKLLQDYGLVVRGC---LDLRYLAMRQRNNLLCNGLSLKSLAETVLNFPLD 220
Query: 150 HNSLSNKEIEAVTPPNWNAWVFTDKQVLHAVEEAR 184
+ L + NW+A T+ QV++A +A+
Sbjct: 221 KSLL-------LRCSNWDAETLTEDQVIYAARDAQ 248
>gi|190689663|gb|ACE86606.1| exonuclease 3'-5' domain-like 2 protein [synthetic construct]
gi|190691025|gb|ACE87287.1| exonuclease 3'-5' domain-like 2 protein [synthetic construct]
Length = 621
Score = 40.0 bits (92), Expect = 0.47, Method: Composition-based stats.
Identities = 41/155 (26%), Positives = 74/155 (47%), Gaps = 21/155 (13%)
Query: 41 VVGFDVKF-NSQTRIAEMLIL---SAANLCLAIQLCRL----SRIPESVTNFLADRTICF 92
V+G D ++ N + + + + +L S + LC+ ++L +L +P ++ + LAD TI
Sbjct: 104 VLGIDCEWVNLEGKASPLSLLQMASPSGLCVLVRLPKLICGGKTLPRTLLDILADGTILK 163
Query: 93 VGFGVDKKTASIHGKTGY-PRNCDTGIDLGHLAARVLKKPKLIGLT--GIAELAKEVGID 149
VG G + + + G R C +DL +LA R GL+ +AE +D
Sbjct: 164 VGVGCSEDASKLLQDYGLVVRGC---LDLRYLAMRQRNNLLCNGLSLKSLAETVLNFPLD 220
Query: 150 HNSLSNKEIEAVTPPNWNAWVFTDKQVLHAVEEAR 184
+ L + NW+A T+ QV++A +A+
Sbjct: 221 KSLL-------LRCSNWDAETLTEDQVIYAARDAQ 248
>gi|301129155|ref|NP_001180289.1| exonuclease 3'-5' domain-containing protein 2 isoform 1 [Homo
sapiens]
gi|301129157|ref|NP_001180290.1| exonuclease 3'-5' domain-containing protein 2 isoform 1 [Homo
sapiens]
gi|301129159|ref|NP_001180291.1| exonuclease 3'-5' domain-containing protein 2 isoform 1 [Homo
sapiens]
gi|301129161|ref|NP_001180292.1| exonuclease 3'-5' domain-containing protein 2 isoform 1 [Homo
sapiens]
gi|410516875|sp|Q9NVH0.2|EXD2_HUMAN RecName: Full=Exonuclease 3'-5' domain-containing protein 2;
AltName: Full=Exonuclease 3'-5' domain-like-containing
protein 2
gi|119601391|gb|EAW80985.1| exonuclease 3'-5' domain-like 2, isoform CRA_b [Homo sapiens]
Length = 621
Score = 40.0 bits (92), Expect = 0.47, Method: Composition-based stats.
Identities = 41/155 (26%), Positives = 74/155 (47%), Gaps = 21/155 (13%)
Query: 41 VVGFDVKF-NSQTRIAEMLIL---SAANLCLAIQLCRL----SRIPESVTNFLADRTICF 92
V+G D ++ N + + + + +L S + LC+ ++L +L +P ++ + LAD TI
Sbjct: 104 VLGIDCEWVNLEGKASPLSLLQMASPSGLCVLVRLPKLICGGKTLPRTLLDILADGTILK 163
Query: 93 VGFGVDKKTASIHGKTGY-PRNCDTGIDLGHLAARVLKKPKLIGLT--GIAELAKEVGID 149
VG G + + + G R C +DL +LA R GL+ +AE +D
Sbjct: 164 VGVGCSEDASKLLQDYGLVVRGC---LDLRYLAMRQRNNLLCNGLSLKSLAETVLNFPLD 220
Query: 150 HNSLSNKEIEAVTPPNWNAWVFTDKQVLHAVEEAR 184
+ L + NW+A T+ QV++A +A+
Sbjct: 221 KSLL-------LRCSNWDAETLTEDQVIYAARDAQ 248
>gi|114653639|ref|XP_510030.2| PREDICTED: exonuclease 3'-5' domain-containing protein 2 isoform 8
[Pan troglodytes]
gi|332842572|ref|XP_001141128.2| PREDICTED: exonuclease 3'-5' domain-containing protein 2 isoform 2
[Pan troglodytes]
gi|332842574|ref|XP_003314457.1| PREDICTED: exonuclease 3'-5' domain-containing protein 2 [Pan
troglodytes]
gi|410224142|gb|JAA09290.1| exonuclease 3'-5' domain containing 2 [Pan troglodytes]
gi|410301904|gb|JAA29552.1| exonuclease 3'-5' domain containing 2 [Pan troglodytes]
gi|410353307|gb|JAA43257.1| exonuclease 3'-5' domain containing 2 [Pan troglodytes]
Length = 621
Score = 40.0 bits (92), Expect = 0.47, Method: Composition-based stats.
Identities = 41/155 (26%), Positives = 74/155 (47%), Gaps = 21/155 (13%)
Query: 41 VVGFDVKF-NSQTRIAEMLIL---SAANLCLAIQLCRL----SRIPESVTNFLADRTICF 92
V+G D ++ N + + + + +L S + LC+ ++L +L +P ++ + LAD TI
Sbjct: 104 VLGIDCEWVNLEGKASPLSLLQMASPSGLCVLVRLPKLICGGKTLPRTLLDILADGTILK 163
Query: 93 VGFGVDKKTASIHGKTGY-PRNCDTGIDLGHLAARVLKKPKLIGLT--GIAELAKEVGID 149
VG G + + + G R C +DL +LA R GL+ +AE +D
Sbjct: 164 VGVGCSEDASKLLQDYGLVVRGC---LDLRYLAMRQRNNLLCNGLSLKSLAETVLNFPLD 220
Query: 150 HNSLSNKEIEAVTPPNWNAWVFTDKQVLHAVEEAR 184
+ L + NW+A T+ QV++A +A+
Sbjct: 221 KSLL-------LRCSNWDAETLTEDQVIYAARDAQ 248
>gi|303235739|ref|ZP_07322346.1| 3'-5' exonuclease [Prevotella disiens FB035-09AN]
gi|302484186|gb|EFL47174.1| 3'-5' exonuclease [Prevotella disiens FB035-09AN]
Length = 230
Score = 39.7 bits (91), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 35/145 (24%), Positives = 64/145 (44%), Gaps = 24/145 (16%)
Query: 57 MLILSAANLCLAIQLCRLSRIPESVTNFLADRTICFVGFGVDKKTASIHGKTGYPRNCDT 116
+L +S ++C +L L +P + L D T+ VG + +H +T + T
Sbjct: 75 LLQVSTHDVCFLFRL-NLIGMPSCIIRLLEDTTVTKVGLSLHDDFMMLHKRTDFT----T 129
Query: 117 G--IDLGHLAARVLKKPKLIGLTGIAELAKE---VGIDHNSLSNKEIEAVTPPNWNAWVF 171
G IDL ++ GI +L+ + + H ++ +E NW A +
Sbjct: 130 GKFIDLQNIVQEF----------GIEDLSLQKLYANLFHERITKRE----QLSNWEAPIL 175
Query: 172 TDKQVLHAVEEARGCYIVADKLLSL 196
+DKQ L+A +A C + ++L +L
Sbjct: 176 SDKQKLYAATDAWACIQIYERLRAL 200
>gi|296215361|ref|XP_002807292.1| PREDICTED: LOW QUALITY PROTEIN: exonuclease 3'-5' domain-containing
protein 2 [Callithrix jacchus]
Length = 621
Score = 39.7 bits (91), Expect = 0.63, Method: Composition-based stats.
Identities = 42/155 (27%), Positives = 74/155 (47%), Gaps = 21/155 (13%)
Query: 41 VVGFDVKF-NSQTRIAEMLIL---SAANLCLAIQLCRL----SRIPESVTNFLADRTICF 92
V+G D ++ N + R + + +L S + LC+ I+L +L +P ++ + LAD TI
Sbjct: 104 VLGIDCEWVNLEGRASPLSLLQMASPSGLCVLIRLPKLICGGKTLPRTLLDILADGTILK 163
Query: 93 VGFGVDKKTASIHGKTGY-PRNCDTGIDLGHLAARVLKKPKLIGLT--GIAELAKEVGID 149
VG G + + + G R C +DL +LA K GL+ +AE +D
Sbjct: 164 VGVGCSEDASKLLQDYGLVVRGC---LDLRYLAMWQRKNLLSNGLSLKSLAETVLNFSLD 220
Query: 150 HNSLSNKEIEAVTPPNWNAWVFTDKQVLHAVEEAR 184
+ + + NW+A T+ QV++A +A+
Sbjct: 221 KSLV-------LRCSNWDAETLTEDQVIYAARDAQ 248
>gi|340379235|ref|XP_003388132.1| PREDICTED: exonuclease 3'-5' domain-containing protein 2-like
[Amphimedon queenslandica]
Length = 548
Score = 39.7 bits (91), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 88/198 (44%), Gaps = 27/198 (13%)
Query: 6 LEIKDVKFKVSVIDDADVIDKKISELSGMLFKMRRVVGFDVKF------NSQTRIAEMLI 59
L+I D +KVSVID A+ + L +GFD ++ N+++ + +
Sbjct: 48 LDISD--YKVSVIDTAEQCEAYFKRLQDTT----TFIGFDCEWVSDNQRNNESSYYPVAL 101
Query: 60 LSAA---NLCLAIQLCRLSRIPESVTNFLADRTICFVGFGVDKKTASIHGKTG-YPRNCD 115
L A C ++L ++ R+ ES+ L D++ G G+ + +G +C
Sbjct: 102 LQLAFPNKECALVRLSKIGRLTESLQKILTDKSSFKFGVGIMNDVTRLCEWSGTLTVSC- 160
Query: 116 TGIDLGHLAARVLKKPKLIGLTGIAELAKEVGIDHNSLSNKEIEAVTPPNWNAWVFTDKQ 175
IDL ++A R + + GL G+ E D +KEI T NW V +D Q
Sbjct: 161 --IDLRNVAFRCGIR-RNNGLGGLLEQL----TDSVLTKSKEI---TCSNWERDVLSDDQ 210
Query: 176 VLHAVEEARGCYIVADKL 193
+L+A +A I+ KL
Sbjct: 211 ILYAARDAIAGLIILSKL 228
>gi|281425845|ref|ZP_06256758.1| 3- 5 exonuclease domain protein [Prevotella oris F0302]
gi|281400106|gb|EFB30937.1| 3- 5 exonuclease domain protein [Prevotella oris F0302]
Length = 227
Score = 39.7 bits (91), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 36/139 (25%), Positives = 62/139 (44%), Gaps = 21/139 (15%)
Query: 51 QTRIAEMLILSAANLCLAIQLCRLSRIPESVTNFLADRTICFVGFGVDKKTASIHGKTGY 110
Q ++A +L +++ + C +L + +P SV L DRT+ +G S+H ++ +
Sbjct: 67 QHKVA-LLQVASHDTCFLFRLNDIG-MPASVIRLLEDRTVPKIGLSWHDDILSLHRRSEF 124
Query: 111 PRNCDTGIDLGHLAARVLKKPKLIGLTGIAELAKE---VGIDHNSLSNKEIEAVTPPNWN 167
IDL ++G GI +L+ + I H +S ++ NW
Sbjct: 125 --EPGYFIDLQ----------DIVGKIGIKDLSLQKLYANIFHQKISKRQ----RLTNWE 168
Query: 168 AWVFTDKQVLHAVEEARGC 186
A V TDKQ +A +A C
Sbjct: 169 AGVLTDKQKQYAATDAWTC 187
>gi|291514664|emb|CBK63874.1| Ribonuclease D [Alistipes shahii WAL 8301]
Length = 202
Score = 39.7 bits (91), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 45/169 (26%), Positives = 66/169 (39%), Gaps = 39/169 (23%)
Query: 41 VVGFDVKFNSQTRIA-----EMLILSAANLCLAIQLCRLSRIP--ESVTNFLADRTICFV 93
V+GFD + R +L LS +C L RL++IP + + L DR I +
Sbjct: 49 VIGFDTETRPSFRPGVTFRVSLLQLSTPTVCY---LFRLNKIPLAKPILQLLEDRRILKI 105
Query: 94 GFGVDKKTASIHGKTGYPRNCDTGIDLGHLAARVLKKPKLIGLTGIAELAKEVGIDHNSL 153
G D DL L R ++ + G + +A E GI SL
Sbjct: 106 G-------------------ADVAGDLRSL--RQIRHFRDGGFVDLQGIAPEWGIGEKSL 144
Query: 154 --------SNKEIEAVTPPNWNAWVFTDKQVLHAVEEARGCYIVADKLL 194
+ +A NW A TDKQ L+A +A C + ++LL
Sbjct: 145 RKLSAIVLGRRVSKAQRLSNWEAATLTDKQQLYAATDAWVCTRIYEQLL 193
>gi|15228731|ref|NP_191791.1| nucleic acid binding protein [Arabidopsis thaliana]
gi|7340703|emb|CAB82946.1| putative protein [Arabidopsis thaliana]
gi|332646817|gb|AEE80338.1| nucleic acid binding protein [Arabidopsis thaliana]
Length = 171
Score = 39.7 bits (91), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 44/85 (51%), Gaps = 5/85 (5%)
Query: 39 RRVVGFDVKFNSQTRIAEMLILSAANLCLAIQLCRL--SRIPESVTNFLADRTICFVGFG 96
R VVG D ++ ++++ +L LS CL I L + +++P S+TNFL F G G
Sbjct: 49 RSVVGGDSEYPPESKLV-ILELSDGQNCLIIPLPYVQGNKLPVSLTNFLNLPDFTFTGVG 107
Query: 97 VDKKTASIHGKTGYPRNCDTGIDLG 121
++K + + G C +D+G
Sbjct: 108 INKALKMLKSECGL--TCKNAVDIG 130
>gi|395849609|ref|XP_003797414.1| PREDICTED: exonuclease 3'-5' domain-containing protein 2 [Otolemur
garnettii]
Length = 625
Score = 39.3 bits (90), Expect = 0.77, Method: Composition-based stats.
Identities = 37/131 (28%), Positives = 60/131 (45%), Gaps = 17/131 (12%)
Query: 61 SAANLCLAIQLCRL----SRIPESVTNFLADRTICFVGFGVDKKTASIHGKTGYP-RNCD 115
S + LC+ ++L +L +P ++ + LAD TI VG G + + + G R C
Sbjct: 131 SPSGLCVLVRLPKLICGGKTLPRTLLDVLADGTILKVGVGCSEDASKLLQDYGLVVRGC- 189
Query: 116 TGIDLGHLAARVLKKPKLIGLT--GIAELAKEVGIDHNSLSNKEIEAVTPPNWNAWVFTD 173
+DL +LA R GL+ +AE +D + L + NW+A TD
Sbjct: 190 --LDLRYLALRQRNNLLCNGLSLKSLAETVLNFPLDKSLL-------LRCSNWDAETLTD 240
Query: 174 KQVLHAVEEAR 184
QV +A +A+
Sbjct: 241 DQVTYAARDAQ 251
>gi|291239803|ref|XP_002739809.1| PREDICTED: exonuclease 3-5 domain containing 2-like [Saccoglossus
kowalevskii]
Length = 682
Score = 39.3 bits (90), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 68/152 (44%), Gaps = 18/152 (11%)
Query: 40 RVVGFD---VKFNSQTRIAEMLILSAANLCLAIQLCRLSR-IPESVTNFLADRTICFVGF 95
+V+G D V + +L LS + C IQ+ R+ +PE + + L D++I VG
Sbjct: 166 QVLGLDCEWVSVDGHPNPVSLLQLSTLDYCYLIQIHRIQPMLPECLIDILQDKSILKVGV 225
Query: 96 GVDKKTASI-HGKTGYPRNCDTGIDLGHLAARVLKKPKLIGLTGIAELAKEVGIDHNSLS 154
G+ + + H R C +DL R + K +A+L+ E+
Sbjct: 226 GIMEDAKKLLHDYKMLVRGC---VDLRTFTFRHRPQLKRCITGSLADLSYEI-------L 275
Query: 155 NKEIEA---VTPPNWNAWVFTDKQVLHAVEEA 183
KE++ V NW A F+D Q+ +A E+A
Sbjct: 276 GKEMDKSLDVRCGNWEAVDFSDVQISYAAEDA 307
>gi|440291797|gb|ELP85039.1| 3-5 exonuclease, putative [Entamoeba invadens IP1]
Length = 337
Score = 39.3 bits (90), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 44/83 (53%), Gaps = 4/83 (4%)
Query: 42 VGFDVKFNSQTRIAEMLILSAANLCLAIQLCRLSRIPESVTNFLADRTICFVGFGVDKKT 101
VGFDV+ + A ++ +S IQ+C R P+ +T+FL ++ I +G GV
Sbjct: 30 VGFDVE--TYRGRASVIQISTMKDSYVIQVCCFRRFPQFLTDFLQNKEISKLGVGVHSDF 87
Query: 102 ASIHGKTGYPRNCDTGIDLGHLA 124
I KT + NC G+D+G +A
Sbjct: 88 ELID-KT-FRINCVGGLDVGWVA 108
>gi|299140705|ref|ZP_07033843.1| 3'-5' exonuclease domain protein [Prevotella oris C735]
gi|298577671|gb|EFI49539.1| 3'-5' exonuclease domain protein [Prevotella oris C735]
Length = 223
Score = 39.3 bits (90), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 36/139 (25%), Positives = 62/139 (44%), Gaps = 21/139 (15%)
Query: 51 QTRIAEMLILSAANLCLAIQLCRLSRIPESVTNFLADRTICFVGFGVDKKTASIHGKTGY 110
Q ++A +L +++ + C +L + +P SV L DRT+ +G S+H ++ +
Sbjct: 63 QHKVA-LLQVASHDTCFLFRLNDIG-MPASVIRLLEDRTVPKIGLSWHDDILSLHRRSEF 120
Query: 111 PRNCDTGIDLGHLAARVLKKPKLIGLTGIAELAKE---VGIDHNSLSNKEIEAVTPPNWN 167
IDL ++G GI +L+ + I H +S ++ NW
Sbjct: 121 --EPGYFIDLQ----------DIVGKIGIKDLSLQKLYANIFHQKISKRQRLT----NWE 164
Query: 168 AWVFTDKQVLHAVEEARGC 186
A V TDKQ +A +A C
Sbjct: 165 AGVLTDKQKQYAATDAWTC 183
>gi|74196546|dbj|BAE34397.1| unnamed protein product [Mus musculus]
Length = 265
Score = 39.3 bits (90), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 37/164 (22%), Positives = 75/164 (45%), Gaps = 19/164 (11%)
Query: 41 VVGFDVKF------NSQTRIAEMLILSAANLCLAIQLCRLSRIPESVTNFLADRTICFVG 94
VVGFD+++ ++R+A + + + N C + +S P+ + L +++I G
Sbjct: 72 VVGFDMEWPPIYKPGKRSRVAVIQLCVSENKCYLFHISSMSVFPQGLKMLLENKSIKKAG 131
Query: 95 FGVDKKTASIHGKTGYPRNCDTGIDLGHLAARVLKKPKLIGLTGIAE--LAKEVGIDHNS 152
G++ + + ++ ++L +A LK + L G+ + L K++
Sbjct: 132 VGIEGDQWKLL--RDFDVKLESFVELTDVANEKLKCAETWSLNGLVKHVLGKQL------ 183
Query: 153 LSNKEIEAVTPPNWNAWVFTDKQVLHAVEEARGCYIVADKLLSL 196
L +K I NW+ + T+ Q L+A +A I+ KL +L
Sbjct: 184 LKDKSIRC---SNWSNFPLTEDQKLYAATDAYAGLIIYQKLGNL 224
>gi|317502960|ref|ZP_07961050.1| conserved hypothetical protein [Prevotella salivae DSM 15606]
gi|315665926|gb|EFV05503.1| conserved hypothetical protein [Prevotella salivae DSM 15606]
Length = 223
Score = 39.3 bits (90), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 37/151 (24%), Positives = 63/151 (41%), Gaps = 19/151 (12%)
Query: 41 VVGFDVKFNSQTRIAE-----MLILSAANLCLAIQLCRLSRIPESVTNFLADRTICFVGF 95
++G D + R E +L +++ + C +L + IP SV L D T+ +G
Sbjct: 47 ILGVDTETRPMFRKGEQHKVALLQVASRDTCFLFRLNDIG-IPPSVIRLLEDCTVPKIGL 105
Query: 96 GVDKKTASIHGKTGYPRNCDTGIDLGHLAARVLKKPKLIGLTGIAELAKEVGIDHNSLSN 155
S+H + + N +DL + K IG+ ++ I H +S
Sbjct: 106 SWHDDLLSLHRRVEF--NPGYFVDLQDIV-------KEIGIKDLSLQKLYANIFHQKISK 156
Query: 156 KEIEAVTPPNWNAWVFTDKQVLHAVEEARGC 186
++ NW A V +DKQ L+A +A C
Sbjct: 157 RQ----RLTNWEADVLSDKQKLYAATDAWAC 183
>gi|119601390|gb|EAW80984.1| exonuclease 3'-5' domain-like 2, isoform CRA_a [Homo sapiens]
Length = 607
Score = 39.3 bits (90), Expect = 0.85, Method: Composition-based stats.
Identities = 36/131 (27%), Positives = 61/131 (46%), Gaps = 17/131 (12%)
Query: 61 SAANLCLAIQLCRL----SRIPESVTNFLADRTICFVGFGVDKKTASIHGKTGY-PRNCD 115
S + LC+ ++L +L +P ++ + LAD TI VG G + + + G R C
Sbjct: 114 SPSGLCVLVRLPKLICGGKTLPRTLLDILADGTILKVGVGCSEDASKLLQDYGLVVRGC- 172
Query: 116 TGIDLGHLAARVLKKPKLIGLT--GIAELAKEVGIDHNSLSNKEIEAVTPPNWNAWVFTD 173
+DL +LA R GL+ +AE +D + L + NW+A T+
Sbjct: 173 --LDLRYLAMRQRNNLLCNGLSLKSLAETVLNFPLDKSLL-------LRCSNWDAETLTE 223
Query: 174 KQVLHAVEEAR 184
QV++A +A+
Sbjct: 224 DQVIYAARDAQ 234
>gi|410100003|ref|ZP_11294968.1| hypothetical protein HMPREF1076_04146 [Parabacteroides goldsteinii
CL02T12C30]
gi|409216558|gb|EKN09542.1| hypothetical protein HMPREF1076_04146 [Parabacteroides goldsteinii
CL02T12C30]
Length = 194
Score = 39.3 bits (90), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 48/188 (25%), Positives = 78/188 (41%), Gaps = 30/188 (15%)
Query: 14 KVSVIDDADVIDKKISELSGMLFKMRRVVGFDVK----FNSQTRIA-EMLILSAANLCLA 68
++ VID DK +S L+ VGFD + F TR ++ +S C
Sbjct: 25 RILVIDTEKDADKAVSYLTQF-----EAVGFDTETRPSFKKGTRYKISLMQISTDEACFL 79
Query: 69 IQLCRLSRIPESVTNFLADRTICFVGFGVDKKTASIHGKTGYPRNCDTGIDLGHLAARVL 128
+L R+ IP+S+ +FL + I +G + ++ +T A L
Sbjct: 80 FRLNRIG-IPQSLEDFLVNDKILKIGLSLRDDFGAMRKRTDIK------------PANFL 126
Query: 129 KKPKLIGLTGI--AELAKEVGIDHNSLSNKEI-EAVTPPNWNAWVFTDKQVLHAVEEARG 185
+G GI A L K I L +K+I + NW A V T++Q +A +A
Sbjct: 127 DLQNYVGQFGIEDASLQKIYAI----LFDKKISKGQRLSNWEADVLTEQQKKYAALDAWA 182
Query: 186 CYIVADKL 193
C + ++L
Sbjct: 183 CLKIYNQL 190
>gi|167751882|ref|ZP_02424009.1| hypothetical protein ALIPUT_00124 [Alistipes putredinis DSM 17216]
gi|167660123|gb|EDS04253.1| 3'-5' exonuclease [Alistipes putredinis DSM 17216]
Length = 203
Score = 39.3 bits (90), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 39/167 (23%), Positives = 66/167 (39%), Gaps = 35/167 (20%)
Query: 41 VVGFDVKFNSQTRIA-----EMLILSAANLCLAIQLCRLSRIPESVTNFLADRTICFVGF 95
V+GFD + R +L LS+ +LC++ + +++ L ++ I +G
Sbjct: 49 VIGFDTETRPSFRAGVVNRVALLQLSSPEQSFLFRLCKIP-LDKAIVKILENKEILKIGA 107
Query: 96 GVDKKTASIHGKTGYPRNCDTGIDLGHLAARVLKKPKLIGLTGIAELAKEVGIDHNSL-- 153
V ++H ++ H + G + ELA E GI+ SL
Sbjct: 108 DVKGDLRALH-------------NIRHF--------QEAGFVDLQELAGEWGIEEKSLRK 146
Query: 154 ------SNKEIEAVTPPNWNAWVFTDKQVLHAVEEARGCYIVADKLL 194
+ +A NW A TDKQ +A +A C + D+LL
Sbjct: 147 LSAIVLGQRVSKAQRLSNWEAAQLTDKQQFYAATDAWVCTRIYDRLL 193
>gi|351708674|gb|EHB11593.1| Exonuclease 3'-5' domain-containing protein 2 [Heterocephalus
glaber]
Length = 612
Score = 38.9 bits (89), Expect = 1.1, Method: Composition-based stats.
Identities = 41/155 (26%), Positives = 74/155 (47%), Gaps = 21/155 (13%)
Query: 41 VVGFDVKF-NSQTRIAEMLIL---SAANLCLAIQLCRL----SRIPESVTNFLADRTICF 92
V+G D ++ N + + + + +L S + LC+ ++L +L +P+++ + LAD TI
Sbjct: 96 VLGIDCEWVNLEGKASPLSLLQMASPSGLCVLVRLPKLIYGGKTLPKTLLDILADGTILK 155
Query: 93 VGFGVDKKTASIHGKTG-YPRNCDTGIDLGHLAARVLKKPKLIGLT--GIAELAKEVGID 149
VG G + + + G R C +DL +LA R GL+ +AE +D
Sbjct: 156 VGVGCSEDASKLLQDYGLMVRGC---LDLRYLATRQRNSLLCSGLSLKSLAETVLNFPLD 212
Query: 150 HNSLSNKEIEAVTPPNWNAWVFTDKQVLHAVEEAR 184
+ L + NW+A T+ QV +A +A+
Sbjct: 213 KSLL-------LRCSNWDAENLTEDQVTYAARDAQ 240
>gi|3851581|gb|AAC72359.1| Wrn protein [Mus musculus]
Length = 988
Score = 38.9 bits (89), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 40/177 (22%), Positives = 79/177 (44%), Gaps = 19/177 (10%)
Query: 28 ISELSGMLFKMRRVVGFDVKF------NSQTRIAEMLILSAANLCLAIQLCRLSRIPESV 81
+SE M VVGFD+++ ++R+A + + + N C + +S P+ +
Sbjct: 59 LSEDISMRLSDGDVVGFDMEWPPIYKPGKRSRVAVIQLCVSENKCYLFHISSMSVFPQGL 118
Query: 82 TNFLADRTICFVGFGVDKKTASIHGKTGYPRNCDTGIDLGHLAARVLKKPKLIGLTGIAE 141
L +++I G G++ + + ++ ++L +A LK + L G+ +
Sbjct: 119 KMLLENKSIKKAGVGIEGDQWKL--LRDFDVKLESFVELTDVANEKLKCAETWSLNGLVK 176
Query: 142 --LAKEVGIDHNSLSNKEIEAVTPPNWNAWVFTDKQVLHAVEEARGCYIVADKLLSL 196
L K++ L +K I NW+ + T+ Q L+A +A I+ KL +L
Sbjct: 177 HVLGKQL------LKDKSIRC---SNWSNFPLTEDQKLYAATDAYAGLIIYQKLGNL 224
>gi|222622515|gb|EEE56647.1| hypothetical protein OsJ_06057 [Oryza sativa Japonica Group]
Length = 231
Score = 38.9 bits (89), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 46/111 (41%), Gaps = 11/111 (9%)
Query: 66 CLAIQLCRLSRIPESVTNFLADRTICFVGFGVDKKTASIHGKTGYPRNCDTGIDLGHLAA 125
CL IP S+ FLA CFVG VDK + P DL LAA
Sbjct: 130 CLIFPFLHADYIPGSLRRFLAGAADCFVGVSVDKDAERLSDDHSLPAG--NTADLRTLAA 187
Query: 126 RVLKKPKLI--GLTGIAELAKEVGIDHNSLSNKEIEAVTPPNWNAWVFTDK 174
+ L P+LI GL + + + +++ VT W+A+ +++
Sbjct: 188 QRLGCPELIQAGLQAVVHVIMGAHL-------VKLQRVTMSRWDAFCLSNE 231
>gi|74227079|dbj|BAE38334.1| unnamed protein product [Mus musculus]
Length = 789
Score = 38.9 bits (89), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 40/177 (22%), Positives = 79/177 (44%), Gaps = 19/177 (10%)
Query: 28 ISELSGMLFKMRRVVGFDVKF------NSQTRIAEMLILSAANLCLAIQLCRLSRIPESV 81
+SE M VVGFD+++ ++R+A + + + N C + +S P+ +
Sbjct: 59 LSEDISMRLSDGDVVGFDMEWPPIYKPGKRSRVAVIQLCVSENKCYLFHISSMSVFPQGL 118
Query: 82 TNFLADRTICFVGFGVDKKTASIHGKTGYPRNCDTGIDLGHLAARVLKKPKLIGLTGIAE 141
L +++I G G++ + + ++ ++L +A LK + L G+ +
Sbjct: 119 KMLLENKSIKKAGVGIEGDQWKLL--RDFDVKLESFVELTDVANEKLKCAETWSLNGLVK 176
Query: 142 --LAKEVGIDHNSLSNKEIEAVTPPNWNAWVFTDKQVLHAVEEARGCYIVADKLLSL 196
L K++ L +K I NW+ + T+ Q L+A +A I+ KL +L
Sbjct: 177 HVLGKQL------LKDKSIRCS---NWSNFPLTEDQKLYAATDAYAGLIIYQKLGNL 224
>gi|356523237|ref|XP_003530248.1| PREDICTED: Werner syndrome ATP-dependent helicase homolog [Glycine
max]
Length = 212
Score = 38.9 bits (89), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 65/152 (42%), Gaps = 18/152 (11%)
Query: 41 VVGFDVKFNSQTRI-------AEMLILSAANLCLAIQLCRLSRIPESVTNFLADRTICFV 93
+VG DV++ TR L L + CL Q+ IP ++++FL + + FV
Sbjct: 58 IVGLDVEWKPNTRPNMQPPNPVATLQLCIGHNCLIFQILYAPLIPRALSSFLNNPDVIFV 117
Query: 94 GFGVDKKTASIHGKTGYPRNCDTGIDLGHLAARVLKKPKL--IGLTGIAELAKEVGIDHN 151
G G+ + + R + G +L LAA L+ +L GL + ID
Sbjct: 118 GVGIQEDADKLLRDYNL-RVTNVG-ELRSLAAEELQVFQLQWAGLAALGHYVLGFEID-- 173
Query: 152 SLSNKEIEAVTPPNWNAWVFTDKQVLHAVEEA 183
+ E VT W+ TD+QV +A +A
Sbjct: 174 -----KPENVTMSRWDNRYLTDEQVAYAAIDA 200
>gi|413950815|gb|AFW83464.1| hypothetical protein ZEAMMB73_986096 [Zea mays]
Length = 164
Score = 38.9 bits (89), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 29/62 (46%), Gaps = 4/62 (6%)
Query: 41 VVGFDVK----FNSQTRIAEMLILSAANLCLAIQLCRLSRIPESVTNFLADRTICFVGFG 96
+VG DV+ F L L + CL QL +P ++ FL DR I FVG G
Sbjct: 48 IVGLDVEWRPSFGPHQNPVATLQLCVGHSCLIFQLLYADYVPGALAEFLGDRGIRFVGVG 107
Query: 97 VD 98
V+
Sbjct: 108 VE 109
>gi|290490726|dbj|BAI79323.1| WRN helicase [Gallus gallus]
Length = 1498
Score = 38.9 bits (89), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 37/164 (22%), Positives = 72/164 (43%), Gaps = 19/164 (11%)
Query: 41 VVGFDVKFNSQTRIAEMLILSAANLCLAIQLCRL------SRIPESVTNFLADRTICFVG 94
VGFD+++ +M ++ LC+ + C L S P+ + L D TI VG
Sbjct: 88 AVGFDIEWPPSYTKGKMAKIALIQLCVTEEKCYLFHISSMSGFPKGLKRLLEDETIKKVG 147
Query: 95 FGVDKKTASIHGKTGYPRNCDTGIDLGHLAARVLKKPKLIGLTGIAE--LAKEVGIDHNS 152
G++ + G + + ++L +A LK ++ L G+ + K++
Sbjct: 148 VGIEGDHWKLMGD--FEVKLKSFVELADVANEKLKCKEVWSLNGLVKHLFGKQL------ 199
Query: 153 LSNKEIEAVTPPNWNAWVFTDKQVLHAVEEARGCYIVADKLLSL 196
L +K I NW + +++ L+A +A +I+ KL ++
Sbjct: 200 LKDKSIRCG---NWEKFPLDEERKLYAATDAYAGFIIYQKLKNM 240
>gi|327279914|ref|XP_003224700.1| PREDICTED: Werner syndrome ATP-dependent helicase-like [Anolis
carolinensis]
Length = 1327
Score = 38.9 bits (89), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 32/162 (19%), Positives = 72/162 (44%), Gaps = 15/162 (9%)
Query: 41 VVGFDVKFNS------QTRIAEMLILSAANLCLAIQLCRLSRIPESVTNFLADRTICFVG 94
V+GFD+++ + ++A + + + C + +S P + L D I +G
Sbjct: 72 VLGFDIEWTPVFTKGKEGKVALIQLCESEEKCYLFHISSMSNFPGGLKRLLEDNHIKKIG 131
Query: 95 FGVDKKTASIHGKTGYPRNCDTGIDLGHLAARVLKKPKLIGLTGIAELAKEVGIDHNSLS 154
G++ + + N +DL LA + L+ ++ L + + + H L
Sbjct: 132 VGIEGDKWKLM--RDFEVNLGDLVDLADLANKKLRCKEIWSLNDLVK-----HLFHKQLL 184
Query: 155 NKEIEAVTPPNWNAWVFTDKQVLHAVEEARGCYIVADKLLSL 196
+++ V NW + T++Q L+A +A +++ KL+++
Sbjct: 185 KEKL--VRCGNWEEFPLTEEQKLYAATDAYAGFLIYKKLMTM 224
>gi|405967601|gb|EKC32742.1| Werner syndrome ATP-dependent helicase-like protein [Crassostrea
gigas]
Length = 261
Score = 38.5 bits (88), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 38/164 (23%), Positives = 70/164 (42%), Gaps = 16/164 (9%)
Query: 42 VGFDVKF------NSQTRIAEMLILSAANLCLAIQLCRLSRIPESVTNFLADRTICFVGF 95
VGFD+++ Q + A + + ++A+ C L + IP + L+ + VG
Sbjct: 95 VGFDMEWPVSYRPGRQEKTAVLQLCTSADKCYIFHLSCIGGIPPVLGQLLSSPRVRKVGV 154
Query: 96 GVDK---KTASIHGKTGYPRNCDTGIDLGHLAARVLKKPKLIGLTGIAELAKEVGIDHNS 152
G+ K +G + P +DL A +VL + L G+ + + I+ N
Sbjct: 155 GIQSDFWKLERDYGLSVAPILKSCVVDLSLYANQVLGSKETWSLDGLVKHLFQRKINKNP 214
Query: 153 LSNKEIEAVTPPNWNAWVFTDKQVLHAVEEARGCYIVADKLLSL 196
+ K +W+ + TD Q +A +A Y++ +KL L
Sbjct: 215 IVRKS-------DWSEFPLTDIQKSYAATDAYVSYLIYEKLNKL 251
>gi|402876541|ref|XP_003902020.1| PREDICTED: exonuclease 3'-5' domain-containing protein 2 isoform 4
[Papio anubis]
gi|402876545|ref|XP_003902022.1| PREDICTED: exonuclease 3'-5' domain-containing protein 2 isoform 6
[Papio anubis]
gi|402876547|ref|XP_003902023.1| PREDICTED: exonuclease 3'-5' domain-containing protein 2 isoform 7
[Papio anubis]
Length = 495
Score = 38.5 bits (88), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 38/133 (28%), Positives = 62/133 (46%), Gaps = 17/133 (12%)
Query: 59 ILSAANLCLAIQLCRL----SRIPESVTNFLADRTICFVGFGVDKKTASIHGKTGY-PRN 113
+ S + LC+ I+L +L +P ++ N LAD TI VG G + + + G R
Sbjct: 1 MASPSGLCVLIRLPKLICGGKTLPRTLLNILADGTILKVGVGCSEDASKLLQDYGLVVRG 60
Query: 114 CDTGIDLGHLAARVLKKPKLIGLT--GIAELAKEVGIDHNSLSNKEIEAVTPPNWNAWVF 171
C +DL +LA R GL+ +AE +D + L + NW+A
Sbjct: 61 C---LDLRYLAMRQRNNLLCNGLSLKSLAETVLNFPLDKSLL-------LRCSNWDAETL 110
Query: 172 TDKQVLHAVEEAR 184
T+ QV++A +A+
Sbjct: 111 TEDQVIYAARDAQ 123
>gi|50949608|emb|CAH10568.1| hypothetical protein [Homo sapiens]
Length = 272
Score = 38.5 bits (88), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 41/155 (26%), Positives = 74/155 (47%), Gaps = 21/155 (13%)
Query: 41 VVGFDVKF-NSQTRIAEMLIL---SAANLCLAIQLCRL----SRIPESVTNFLADRTICF 92
V+G D ++ N + + + + +L S + LC+ ++L +L +P ++ + LAD TI
Sbjct: 104 VLGIDCEWVNLEGKASPLSLLQMASPSGLCVLVRLPKLICGGKTLPRTLLDILADGTILK 163
Query: 93 VGFGVDKKTASIHGKTGY-PRNCDTGIDLGHLAARVLKKPKLIGLT--GIAELAKEVGID 149
VG G + + + G R C +DL +LA R GL+ +AE +D
Sbjct: 164 VGVGCSEDASKLLQDYGLVVRGC---LDLRYLAMRQRNNLLCNGLSLKSLAETVLNFPLD 220
Query: 150 HNSLSNKEIEAVTPPNWNAWVFTDKQVLHAVEEAR 184
+ L + NW+A T+ QV++A +A+
Sbjct: 221 KSLL-------LRCSNWDAETLTEDQVIYAARDAQ 248
>gi|2645409|gb|AAB87366.1| homolog of human Werners syndrome protein [Mus musculus]
Length = 643
Score = 38.5 bits (88), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 35/161 (21%), Positives = 74/161 (45%), Gaps = 19/161 (11%)
Query: 41 VVGFDVKF------NSQTRIAEMLILSAANLCLAIQLCRLSRIPESVTNFLADRTICFVG 94
VVGFD+++ ++R+A + + + N C + +S P+ + L +++I G
Sbjct: 72 VVGFDMEWPPIYKPGKRSRVAVIQLCVSENKCYLFHISSMSVFPQGLKMLLENKSIKKAG 131
Query: 95 FGVDKKTASIHGKTGYPRNCDTGIDLGHLAARVLKKPKLIGLTGIAE--LAKEVGIDHNS 152
G++ + + ++ ++L +A LK + L G+ + L K++
Sbjct: 132 VGIEGDQWKL--LRDFDVKLESFVELTDVANEKLKCAETWSLNGLVKHVLGKQL------ 183
Query: 153 LSNKEIEAVTPPNWNAWVFTDKQVLHAVEEARGCYIVADKL 193
L +K I NW+ + T+ Q L+A +A +I+ K+
Sbjct: 184 LKDKSIRCS---NWSNFPLTEDQKLYAATDAYAGFIIYRKI 221
>gi|21356549|ref|NP_650075.1| CG6744, isoform A [Drosophila melanogaster]
gi|386765579|ref|NP_001247048.1| CG6744, isoform B [Drosophila melanogaster]
gi|10726453|gb|AAF54639.2| CG6744, isoform A [Drosophila melanogaster]
gi|19528113|gb|AAL90171.1| AT25352p [Drosophila melanogaster]
gi|383292644|gb|AFH06366.1| CG6744, isoform B [Drosophila melanogaster]
Length = 583
Score = 38.5 bits (88), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 36/158 (22%), Positives = 67/158 (42%), Gaps = 15/158 (9%)
Query: 40 RVVGFDVKF----NSQTRIAEMLILSAANLCLAIQLCRLSRIPESVTNFLADRTICFVGF 95
+V+GFD ++ S+ +A + + S LC +LC + +IP+ + L D ++ VG
Sbjct: 78 KVLGFDCEWITVGGSRRPVALLQLSSHRGLCALFRLCHMKQIPQDLRELLEDDSVIKVGV 137
Query: 96 GVDKKTASIHGKTGYPRNCDTGIDLGHLAARVLKKPKLIGLTGIAELAKEVGIDHNSLSN 155
+ + G + +DL L KP+ G+ +L+K H + +
Sbjct: 138 APQEDAMKLSHDYGV--GVASTLDLRFLCVMAGHKPE-----GLGKLSKT----HLNYTL 186
Query: 156 KEIEAVTPPNWNAWVFTDKQVLHAVEEARGCYIVADKL 193
+ + NW A KQ+ +A +A + KL
Sbjct: 187 DKHWRLACSNWEAKTLEPKQLDYAANDALMAVAIYQKL 224
>gi|307104422|gb|EFN52676.1| hypothetical protein CHLNCDRAFT_54323 [Chlorella variabilis]
Length = 529
Score = 38.5 bits (88), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 44/177 (24%), Positives = 77/177 (43%), Gaps = 40/177 (22%)
Query: 30 ELSGMLFKMRR-----VVGFDVKFNSQ-------TRIAEMLILSAANLCLAIQLCRLS-R 76
+L L +RR V D+++ + TR+A ++ L++A + + +++CRL R
Sbjct: 140 QLPAALAALRRSMQDSCVAIDLEWKPEGWAGGGPTRVA-LMQLASATVAVLVRVCRLGFR 198
Query: 77 IPESVTNFLADRTICFVGFGVD-------KKTASIHGKTGYPRNCD---TGIDLGHLAAR 126
+P S+ FL+D + F+GF D ++T + +PR D G LG+
Sbjct: 199 MPPSLRAFLSDPDLTFIGFSWDSSDEVKMRQTFGEGRRELFPRFLDLQQVGASLGYHG-- 256
Query: 127 VLKKPKLIGLTGIAELAKEVGIDHNSLSNKEIEAVTPPNWNAWVFTDKQVLHAVEEA 183
G+A L K V + + VT NW A + +QV + +A
Sbjct: 257 ----------FGLAALTKRV----LGFALPKCRKVTMSNWEARQLSARQVQYGALDA 299
>gi|383860961|ref|XP_003705955.1| PREDICTED: exonuclease 3'-5' domain-containing protein 2-like
[Megachile rotundata]
Length = 589
Score = 38.5 bits (88), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 39/158 (24%), Positives = 70/158 (44%), Gaps = 16/158 (10%)
Query: 41 VVGFDVKFNSQTRIAEMLILSAANLCLAIQLCRLSRIPESVTNFLADRTICFVGFGVDKK 100
V+GFD ++ ++ + + + + +C ++ ++ IP + LA + I VG +
Sbjct: 77 VLGFDCEWVNEGPVTLLQLATFNGVCGLFRIGKIGYIPYKLKELLASKHILKVGVASYED 136
Query: 101 TASIHGKTGYPRNCDTG--IDLGHLAARV-LKKPKLIGLTGIAELAKEVGIDHNSLSNKE 157
I G C +DL LA V L PK + + L E+ +K
Sbjct: 137 AQKIIADYG----CKVSGTLDLRTLAEHVNLPSPKSLAAMSLEYLNLEM--------DKL 184
Query: 158 IEAVTPPNWNAWVFTDKQVLHAVEEARGCYIVADKLLS 195
IE V NW+A TD+QV +A +A ++ D+++
Sbjct: 185 IE-VRCSNWDAGTLTDEQVAYAACDAIASVLIYDQIVQ 221
>gi|291406467|ref|XP_002719588.1| PREDICTED: exonuclease 3'-5' domain containing 2 isoform 2
[Oryctolagus cuniculus]
Length = 620
Score = 38.1 bits (87), Expect = 1.7, Method: Composition-based stats.
Identities = 42/153 (27%), Positives = 76/153 (49%), Gaps = 17/153 (11%)
Query: 41 VVGFDVKF-NSQTRIAEMLIL---SAANLCLAIQLCRLSR----IPESVTNFLADRTICF 92
V+G D ++ N + + + + +L S + C+ I+L +L+ +P ++ + LAD TI
Sbjct: 103 VLGIDCEWVNCEGKASPLSLLQMASTSGFCVLIRLPKLTYGGRVLPRTLLDILADGTILK 162
Query: 93 VGFGVDKKTASIHGKTGYP-RNCDTGIDLGHLAARVLKKPKLIGLTGIAELAKEVGIDHN 151
VG G + + + G R C +DL +LA R GL+ + LA+ V N
Sbjct: 163 VGVGCSEDASKLLQDYGLAVRGC---LDLRYLAVRQRNNLLRNGLS-LKSLAETV---LN 215
Query: 152 SLSNKEIEAVTPPNWNAWVFTDKQVLHAVEEAR 184
+K ++ + NW+A T+ QV +A +A+
Sbjct: 216 FPLDKSLQ-LRCSNWDAENLTEDQVTYAARDAQ 247
>gi|291406465|ref|XP_002719587.1| PREDICTED: exonuclease 3'-5' domain containing 2 isoform 1
[Oryctolagus cuniculus]
Length = 643
Score = 38.1 bits (87), Expect = 1.7, Method: Composition-based stats.
Identities = 42/153 (27%), Positives = 76/153 (49%), Gaps = 17/153 (11%)
Query: 41 VVGFDVKF-NSQTRIAEMLIL---SAANLCLAIQLCRLSR----IPESVTNFLADRTICF 92
V+G D ++ N + + + + +L S + C+ I+L +L+ +P ++ + LAD TI
Sbjct: 126 VLGIDCEWVNCEGKASPLSLLQMASTSGFCVLIRLPKLTYGGRVLPRTLLDILADGTILK 185
Query: 93 VGFGVDKKTASIHGKTGYP-RNCDTGIDLGHLAARVLKKPKLIGLTGIAELAKEVGIDHN 151
VG G + + + G R C +DL +LA R GL+ + LA+ V N
Sbjct: 186 VGVGCSEDASKLLQDYGLAVRGC---LDLRYLAVRQRNNLLRNGLS-LKSLAETV---LN 238
Query: 152 SLSNKEIEAVTPPNWNAWVFTDKQVLHAVEEAR 184
+K ++ + NW+A T+ QV +A +A+
Sbjct: 239 FPLDKSLQ-LRCSNWDAENLTEDQVTYAARDAQ 270
>gi|407261615|ref|XP_003946318.1| PREDICTED: Werner syndrome ATP-dependent helicase homolog [Mus
musculus]
Length = 1434
Score = 38.1 bits (87), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 37/164 (22%), Positives = 75/164 (45%), Gaps = 19/164 (11%)
Query: 41 VVGFDVKF------NSQTRIAEMLILSAANLCLAIQLCRLSRIPESVTNFLADRTICFVG 94
VVGFD+++ ++R+A + + + N C + +S P+ + L +++I G
Sbjct: 139 VVGFDMEWPPIYKPGKRSRVAVIQLCVSENKCYLFHISSMSVFPQGLKMLLENKSIKKAG 198
Query: 95 FGVDKKTASIHGKTGYPRNCDTGIDLGHLAARVLKKPKLIGLTGIAE--LAKEVGIDHNS 152
G++ + + ++ ++L +A LK + L G+ + L K++
Sbjct: 199 VGIEGDQWKL--LRDFDVKLESFVELTDVANEKLKCAETWSLNGLVKHVLGKQL------ 250
Query: 153 LSNKEIEAVTPPNWNAWVFTDKQVLHAVEEARGCYIVADKLLSL 196
L +K I NW+ + T+ Q L+A +A I+ KL +L
Sbjct: 251 LKDKSIRCS---NWSNFPLTEDQKLYAATDAYAGLIIYQKLGNL 291
>gi|403264513|ref|XP_003924522.1| PREDICTED: exonuclease 3'-5' domain-containing protein 2 isoform 1
[Saimiri boliviensis boliviensis]
Length = 621
Score = 38.1 bits (87), Expect = 1.8, Method: Composition-based stats.
Identities = 41/157 (26%), Positives = 76/157 (48%), Gaps = 25/157 (15%)
Query: 41 VVGFDVKF-NSQTRIAEMLIL---SAANLCLAIQLCRL----SRIPESVTNFLADRTICF 92
V+G D ++ N + + + + +L S + LC+ I+L +L +P ++ + LAD TI
Sbjct: 104 VLGIDCEWVNLEGKASPLSLLQMASPSGLCVLIRLPKLICGGKTLPRTLLDILADGTILK 163
Query: 93 VGFGVDKKTASIHGKTGY-PRNCDTGIDLGHLAARVLKKPKL----IGLTGIAELAKEVG 147
VG G + + + G R C +DL +LA + ++ L + L +AE
Sbjct: 164 VGVGCSEDASKLLQDYGLVVRGC---LDLRYLA--MWQRNNLLSNGLSLKSLAETVLNFP 218
Query: 148 IDHNSLSNKEIEAVTPPNWNAWVFTDKQVLHAVEEAR 184
+D + L + NW+A T+ QV++A +A+
Sbjct: 219 LDKSLL-------LRCSNWDAETLTEDQVIYAARDAQ 248
>gi|332228984|ref|XP_003263668.1| PREDICTED: exonuclease 3'-5' domain-containing protein 2 isoform 5
[Nomascus leucogenys]
gi|332228986|ref|XP_003263669.1| PREDICTED: exonuclease 3'-5' domain-containing protein 2 isoform 6
[Nomascus leucogenys]
gi|332228988|ref|XP_003263670.1| PREDICTED: exonuclease 3'-5' domain-containing protein 2 isoform 7
[Nomascus leucogenys]
Length = 496
Score = 38.1 bits (87), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 37/133 (27%), Positives = 62/133 (46%), Gaps = 17/133 (12%)
Query: 59 ILSAANLCLAIQLCRL----SRIPESVTNFLADRTICFVGFGVDKKTASIHGKTGYP-RN 113
+ S + LC+ ++L +L +P ++ + LAD TI VG G + + + G R
Sbjct: 1 MASPSGLCVLVRLPKLICGGKTLPRTLLDILADGTILKVGVGCSEDASKLLQDYGLVVRG 60
Query: 114 CDTGIDLGHLAARVLKKPKLIGLT--GIAELAKEVGIDHNSLSNKEIEAVTPPNWNAWVF 171
C +DL +LA R GL+ +AE +D + L + NWNA
Sbjct: 61 C---LDLRYLAMRQRNNLLCNGLSLKSLAETVLNFPLDKSLL-------LRCSNWNAETL 110
Query: 172 TDKQVLHAVEEAR 184
T+ QV++A +A+
Sbjct: 111 TEDQVIYAARDAQ 123
>gi|392571798|gb|EIW64970.1| ribonuclease H-like protein [Trametes versicolor FP-101664 SS1]
Length = 428
Score = 38.1 bits (87), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 39/154 (25%), Positives = 68/154 (44%), Gaps = 24/154 (15%)
Query: 20 DADVIDKKISELSGMLFKMRRVVGFD-------VKFNSQTRIAEMLILSAANLCLAIQLC 72
+AD ++ I++L+ +V+GFD +K + +A ++ L++A+L L I +
Sbjct: 47 NADATNEAIAQLNS------KVLGFDLEWKPNFIKGRPENPVA-LVQLASADLVLLIHIF 99
Query: 73 RLSRIPESVTNFLADRTICFVGFGVDKKTASIHGKTGY-PRNCDTGIDLGHLAARV---- 127
+ PE + + LAD + G G+ K + G RNC +DL LA V
Sbjct: 100 HMPTFPERLRDLLADEAVVKAGVGIQKDCKKLFTDYGVDTRNC---VDLSLLARTVDNAR 156
Query: 128 --LKKPKLIGLTGIAELAKEVGIDHNSLSNKEIE 159
K IGL + E +E+ + + E
Sbjct: 157 WKGKYASPIGLARLCETYEELTLQKGRVQTSNWE 190
>gi|7595900|gb|AAF64490.1|AF241636_1 WRN protein [Mus musculus]
Length = 1401
Score = 38.1 bits (87), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 37/164 (22%), Positives = 75/164 (45%), Gaps = 19/164 (11%)
Query: 41 VVGFDVKF------NSQTRIAEMLILSAANLCLAIQLCRLSRIPESVTNFLADRTICFVG 94
VVGFD+++ ++R+A + + + N C + +S P+ + L +++I G
Sbjct: 72 VVGFDMEWPPIYKPGKRSRVAVIQLCVSENKCYLFHISSMSVFPQGLKMLLENKSIKKAG 131
Query: 95 FGVDKKTASIHGKTGYPRNCDTGIDLGHLAARVLKKPKLIGLTGIAE--LAKEVGIDHNS 152
G++ + + ++ ++L +A LK + L G+ + L K++
Sbjct: 132 VGIEGDQWKL--LRDFDVKLESFVELTDVANEKLKCAETWSLNGLVKHVLGKQL------ 183
Query: 153 LSNKEIEAVTPPNWNAWVFTDKQVLHAVEEARGCYIVADKLLSL 196
L +K I NW+ + T+ Q L+A +A I+ KL +L
Sbjct: 184 LKDKSIRCS---NWSNFPLTEDQKLYAATDAYAGLIIYQKLGNL 224
>gi|148703462|gb|EDL35409.1| Werner syndrome homolog (human) [Mus musculus]
Length = 1385
Score = 38.1 bits (87), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 37/164 (22%), Positives = 75/164 (45%), Gaps = 19/164 (11%)
Query: 41 VVGFDVKF------NSQTRIAEMLILSAANLCLAIQLCRLSRIPESVTNFLADRTICFVG 94
VVGFD+++ ++R+A + + + N C + +S P+ + L +++I G
Sbjct: 72 VVGFDMEWPPIYKPGKRSRVAVIQLCVSENKCYLFHISSMSVFPQGLKMLLENKSIKKAG 131
Query: 95 FGVDKKTASIHGKTGYPRNCDTGIDLGHLAARVLKKPKLIGLTGIAE--LAKEVGIDHNS 152
G++ + + ++ ++L +A LK + L G+ + L K++
Sbjct: 132 VGIEGDQWKL--LRDFDVKLESFVELTDVANEKLKCAETWSLNGLVKHVLGKQL------ 183
Query: 153 LSNKEIEAVTPPNWNAWVFTDKQVLHAVEEARGCYIVADKLLSL 196
L +K I NW+ + T+ Q L+A +A I+ KL +L
Sbjct: 184 LKDKSIRCS---NWSNFPLTEDQKLYAATDAYAGLIIYQKLGNL 224
>gi|2130973|dbj|BAA20269.1| WRN typeI [Mus musculus]
gi|2130975|dbj|BAA20270.1| WRN typeII [Mus musculus]
Length = 1401
Score = 38.1 bits (87), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 37/164 (22%), Positives = 75/164 (45%), Gaps = 19/164 (11%)
Query: 41 VVGFDVKF------NSQTRIAEMLILSAANLCLAIQLCRLSRIPESVTNFLADRTICFVG 94
VVGFD+++ ++R+A + + + N C + +S P+ + L +++I G
Sbjct: 72 VVGFDMEWPPIYKPGKRSRVAVIQLCVSENKCYLFHISSMSVFPQGLKMLLENKSIKKAG 131
Query: 95 FGVDKKTASIHGKTGYPRNCDTGIDLGHLAARVLKKPKLIGLTGIAE--LAKEVGIDHNS 152
G++ + + ++ ++L +A LK + L G+ + L K++
Sbjct: 132 VGIEGDQWKL--LRDFDVKLESFVELTDVANEKLKCAETWSLNGLVKHVLGKQL------ 183
Query: 153 LSNKEIEAVTPPNWNAWVFTDKQVLHAVEEARGCYIVADKLLSL 196
L +K I NW+ + T+ Q L+A +A I+ KL +L
Sbjct: 184 LKDKSIRCS---NWSNFPLTEDQKLYAATDAYAGLIIYQKLGNL 224
>gi|381179283|ref|ZP_09888139.1| nucleoside ABC transporter ATP-binding protein [Treponema
saccharophilum DSM 2985]
gi|380768790|gb|EIC02773.1| nucleoside ABC transporter ATP-binding protein [Treponema
saccharophilum DSM 2985]
Length = 519
Score = 38.1 bits (87), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 37/73 (50%), Gaps = 2/73 (2%)
Query: 39 RRVVGFDVKFNSQTRIAEM--LILSAANLCLAIQLCRLSRIPESVTNFLADRTICFVGFG 96
R +VG DV+FN + + AE+ ILS NLC+A ++ + A +C G
Sbjct: 236 RMMVGHDVQFNVEKKPAEIGRPILSVQNLCVASKIHENLAVKNVSLEIRAGEIVCIAGID 295
Query: 97 VDKKTASIHGKTG 109
+ ++ I+G TG
Sbjct: 296 GNGQSEFIYGLTG 308
>gi|330789845|ref|XP_003283009.1| hypothetical protein DICPUDRAFT_146576 [Dictyostelium purpureum]
gi|325087081|gb|EGC40462.1| hypothetical protein DICPUDRAFT_146576 [Dictyostelium purpureum]
Length = 662
Score = 37.7 bits (86), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 34/153 (22%), Positives = 65/153 (42%), Gaps = 22/153 (14%)
Query: 41 VVGFDVKFNSQTRIAE---------MLILSAANLCLAIQLCRLSRIPESVTNFLADRTIC 91
++GFD ++++Q + E ++ LS+ IQ+ ++ IP+S+ L D +
Sbjct: 171 IIGFDAEWSNQNQYQECEGYPHKVALIQLSSKTDVYLIQISQMPTIPQSLEQILVDPRLI 230
Query: 92 FVGFGVDKKTASIHGKTG-YPRNCDTGIDLGHLAARVLKKPKLIGLTGIAELAKEVGIDH 150
VG + + A+I + C + +G L + GL +A ID
Sbjct: 231 KVGVAISQDAATIFSSFSIVTKGCVDLVPIGRLTNY-----QGNGLASLALNVLNANIDK 285
Query: 151 NSLSNKEIEAVTPPNWNAWVFTDKQVLHAVEEA 183
N+L + +W T +QV++A +A
Sbjct: 286 NNL-------IRCSHWENKNLTSEQVMYAAIDA 311
>gi|15230494|ref|NP_187850.1| extensin family protein [Arabidopsis thaliana]
gi|12321953|gb|AAG51010.1|AC069474_9 hypothetical protein; 75534-76595 [Arabidopsis thaliana]
gi|15795163|dbj|BAB03151.1| unnamed protein product [Arabidopsis thaliana]
gi|332641676|gb|AEE75197.1| extensin family protein [Arabidopsis thaliana]
Length = 353
Score = 37.7 bits (86), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 18/41 (43%), Positives = 22/41 (53%)
Query: 55 AEMLILSAANLCLAIQLCRLSRIPESVTNFLADRTICFVGF 95
A L L N C+ IQL +R+P + FL DR FVGF
Sbjct: 216 ANTLQLCVGNRCIIIQLFYCNRVPHVLRRFLGDRNHTFVGF 256
>gi|288927674|ref|ZP_06421521.1| 3'-5' exonuclease domain protein [Prevotella sp. oral taxon 317
str. F0108]
gi|288330508|gb|EFC69092.1| 3'-5' exonuclease domain protein [Prevotella sp. oral taxon 317
str. F0108]
Length = 209
Score = 37.7 bits (86), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 35/166 (21%), Positives = 71/166 (42%), Gaps = 25/166 (15%)
Query: 39 RRVVGFDVKF-----NSQTRIAEMLILSAANLCLAIQLCRLSRIPESVTNFLADRTICFV 93
R ++G D + +T + +L +S +++C +L + P ++ L ++ + V
Sbjct: 47 RDILGVDTETRPSFKKGETHMVSLLQVSTSDVCFLFRLNHIGITP-AILRLLENKAVPMV 105
Query: 94 GFGVDKKTASIHGKTGYPRNCDTGIDLGHLAARVLKKPKLIGLTGIAELAKE---VGIDH 150
G + S+H + + IDL L+G GI +L+ + + H
Sbjct: 106 GLSLHDDMLSLHKRVAFTPGF--FIDL----------QDLVGELGIEDLSLQKLYANLFH 153
Query: 151 NSLSNKEIEAVTPPNWNAWVFTDKQVLHAVEEARGCYIVADKLLSL 196
+S ++ NW++ V DKQ +A +A C + ++L L
Sbjct: 154 QKISKRQ----RLTNWDSDVLNDKQKAYAALDAWACINLYKEILRL 195
>gi|195156982|ref|XP_002019375.1| GL12271 [Drosophila persimilis]
gi|194115966|gb|EDW38009.1| GL12271 [Drosophila persimilis]
Length = 578
Score = 37.7 bits (86), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 29/109 (26%), Positives = 49/109 (44%), Gaps = 11/109 (10%)
Query: 40 RVVGFDVKF----NSQTRIAEMLILSAANLCLAIQLCRLSRIPESVTNFLADRTICFVGF 95
+VVGFD ++ S+ +A + + S LC +LC + +IP+ + + L D + VG
Sbjct: 74 KVVGFDCEWITVGGSRRPVALLQLSSHKGLCALFRLCTMRQIPKDLRDLLEDEAVIKVGV 133
Query: 96 GVDKKTASIHGKTGYPRNCDTGIDLGHLAARVLKKPKLIGLTGIAELAK 144
+ G + +DL LA KP+ G+ +LAK
Sbjct: 134 APQDDAKKLAHDYGV--GVASTLDLRFLAVMAGHKPE-----GLGKLAK 175
>gi|115436114|ref|NP_001042815.1| Os01g0299700 [Oryza sativa Japonica Group]
gi|113532346|dbj|BAF04729.1| Os01g0299700, partial [Oryza sativa Japonica Group]
Length = 237
Score = 37.7 bits (86), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 37/132 (28%), Positives = 59/132 (44%), Gaps = 10/132 (7%)
Query: 57 MLILSAANLCLAIQLCRLS---RIPESVTNFLADRTICFVGFGVDKKTASIHGKTGYPRN 113
+L L A + CL +QL ++ R+P V + LAD ++ VG G+ + A + GY
Sbjct: 92 ILQLCAGDSCLILQLLHVAGARRVPPLVGDLLADPSVRLVGIGIGENAAKL--ADGYGVR 149
Query: 114 CDTGIDLGHLAARVLKKPKLIGLTGIAELAKEVGIDHNSLSNKEIEAVTPPNWNAWVFTD 173
C +DL + R L + G+ +EV L+ ++ VT +W
Sbjct: 150 CAAPVDLEDVCDRRLGRLPGARRLGLKGYVREV----LGLTMEKPMDVTRSDWERRHLDA 205
Query: 174 KQVLHAVEEARG 185
QV +A ARG
Sbjct: 206 AQVRYAC-SARG 216
>gi|198454637|ref|XP_001359658.2| GA19827 [Drosophila pseudoobscura pseudoobscura]
gi|198132885|gb|EAL28808.2| GA19827 [Drosophila pseudoobscura pseudoobscura]
Length = 578
Score = 37.7 bits (86), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 29/109 (26%), Positives = 49/109 (44%), Gaps = 11/109 (10%)
Query: 40 RVVGFDVKF----NSQTRIAEMLILSAANLCLAIQLCRLSRIPESVTNFLADRTICFVGF 95
+VVGFD ++ S+ +A + + S LC +LC + +IP+ + + L D + VG
Sbjct: 74 KVVGFDCEWITVGGSRRPVALLQLSSHKGLCALFRLCTMRQIPKDLRDLLEDEAVIKVGV 133
Query: 96 GVDKKTASIHGKTGYPRNCDTGIDLGHLAARVLKKPKLIGLTGIAELAK 144
+ G + +DL LA KP+ G+ +LAK
Sbjct: 134 APQDDAKKLAHDYGV--GVASTLDLRFLAVMAGHKPE-----GLGKLAK 175
>gi|449550625|gb|EMD41589.1| hypothetical protein CERSUDRAFT_110166 [Ceriporiopsis subvermispora
B]
Length = 422
Score = 37.7 bits (86), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 46/198 (23%), Positives = 83/198 (41%), Gaps = 27/198 (13%)
Query: 15 VSVIDDADVIDKKISELSGMLFKM---RRVVGFDVKFNS------QTRIAEMLILSAANL 65
++ I D D+ + EL+ ++ + R +GFD+++ + ++A ++ L+ N
Sbjct: 62 LTYIKKRDSADEHLMELTEIMENLPLEERALGFDMEWRPVFQAGKKAKVA-LIQLAWENC 120
Query: 66 CLAIQLCRLSRIPESVTNFLADRTICFVGFGVDKKTASIHGKTGYPRNCDTGIDLGHLAA 125
+ + + PE + L D TI G G+ + T + N +DL LA
Sbjct: 121 VWLVHISKTGGPPEKLKEILEDPTIVKTGVGIQFDCKKLW--TDWGVNVRNAVDLSLLAK 178
Query: 126 ----RVLKKP--KLIGLTGIAELAKEVGIDHNSLSNKEIEAVTPPNWNAWVFTDKQVLHA 179
+ K P + I L +AE + +D +T NW A DK L+A
Sbjct: 179 SADNKRWKGPYSEGISLLRLAEAYENCTLDKGK--------ITTSNWEA-TLDDKMQLYA 229
Query: 180 VEEARGCYIVADKLLSLL 197
++ Y + KLL+ L
Sbjct: 230 ANDSHVGYRIYTKLLAEL 247
>gi|354474937|ref|XP_003499686.1| PREDICTED: Werner syndrome ATP-dependent helicase homolog
[Cricetulus griseus]
gi|344242328|gb|EGV98431.1| Werner syndrome ATP-dependent helicase-like [Cricetulus griseus]
Length = 1405
Score = 37.4 bits (85), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 36/164 (21%), Positives = 73/164 (44%), Gaps = 19/164 (11%)
Query: 41 VVGFDV------KFNSQTRIAEMLILSAANLCLAIQLCRLSRIPESVTNFLADRTICFVG 94
V+GFD+ K + R+A + + + + C + +S P+ + L +++I G
Sbjct: 78 VIGFDMEWPPIYKHGKRNRVAVIQLCMSESKCYLFHISSMSVFPQGLKMLLENKSIKKAG 137
Query: 95 FGVDKKTASIHGKTGYPRNCDTGIDLGHLAARVLKKPKLIGLTGIAE--LAKEVGIDHNS 152
G++ + + ++ ++L +A LK + L G+ + L K++
Sbjct: 138 VGIEGDQWKL--LRDFEIKLESFVELTDIANEKLKCAETWSLNGLVKHILGKQL------ 189
Query: 153 LSNKEIEAVTPPNWNAWVFTDKQVLHAVEEARGCYIVADKLLSL 196
L +K I NW+ + TD Q L+A +A + +KL +L
Sbjct: 190 LKDKSIRCS---NWSNFPLTDDQKLYAATDAYAGLAIYEKLANL 230
>gi|297838223|ref|XP_002886993.1| hypothetical protein ARALYDRAFT_894216 [Arabidopsis lyrata subsp.
lyrata]
gi|297332834|gb|EFH63252.1| hypothetical protein ARALYDRAFT_894216 [Arabidopsis lyrata subsp.
lyrata]
Length = 203
Score = 37.4 bits (85), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 25/100 (25%), Positives = 47/100 (47%), Gaps = 7/100 (7%)
Query: 37 KMRRVVGFDV----KFNSQTRIAEMLILSAANLCLAIQLCRLSRIPESVTNFLADRTICF 92
M +++G K Q++ +L L + CL +QL +P + NFL I F
Sbjct: 39 NMTKIIGLHTERAQKVGQQSKTT-LLQLCDGDHCLIVQLPVGGNLPSGLLNFLNLPYITF 97
Query: 93 VGFGVDKKTASIHGKTGYPRNCDTGIDLGHLAARVLKKPK 132
VG G++K ++ + G C+ +++G + +L K +
Sbjct: 98 VGIGINKTLMNLESEFGL--TCNNAVEIGPSSWDLLNKTE 135
>gi|449499575|ref|XP_002193489.2| PREDICTED: Werner syndrome ATP-dependent helicase homolog
[Taeniopygia guttata]
Length = 1497
Score = 37.4 bits (85), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 36/165 (21%), Positives = 70/165 (42%), Gaps = 21/165 (12%)
Query: 41 VVGFDVKFNSQTRIAEMLILSAANLCLAIQLCRLSRI------PESVTNFLADRTICFVG 94
VGFD+++ M + +C+ C L + P+ + L D TI VG
Sbjct: 155 AVGFDIEWPPAYTKGRMAKTAVIQMCVTEDKCYLFHVSSMAGFPKGLKRLLEDETIKKVG 214
Query: 95 FGVDKKTASIHGKTGYPRNCDTGIDLGHLAARVLKKPKLIGLTGIAELAKEVGIDHNSLS 154
G++ + + + + ++L +A LK + L G+ + H L
Sbjct: 215 VGIEGDQWKLM--SDFEIKLKSFVELADVANEKLKCKETWSLNGL--------VKH--LF 262
Query: 155 NKEI---EAVTPPNWNAWVFTDKQVLHAVEEARGCYIVADKLLSL 196
+++ ++V NW + ++Q L+A +A YIV +KL ++
Sbjct: 263 GRQLLKDQSVRCSNWEQFPLNEEQKLYAATDAYAGYIVYEKLKNM 307
>gi|195500059|ref|XP_002097212.1| GE24622 [Drosophila yakuba]
gi|194183313|gb|EDW96924.1| GE24622 [Drosophila yakuba]
Length = 583
Score = 37.4 bits (85), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 37/158 (23%), Positives = 69/158 (43%), Gaps = 15/158 (9%)
Query: 40 RVVGFDVKF----NSQTRIAEMLILSAANLCLAIQLCRLSRIPESVTNFLADRTICFVGF 95
+V+GFD ++ S+ +A + + S LC +LC + +IP+ + + L D + +
Sbjct: 78 KVLGFDCEWITVGGSRRPVALLQLSSHRGLCALFRLCHMKQIPKDLRDLLEDDAV--IKV 135
Query: 96 GVDKKTASIHGKTGYPRNCDTGIDLGHLAARVLKKPKLIGLTGIAELAKEVGIDHNSLSN 155
GV + +I Y + +DL L KP+ G+ +L+K H + +
Sbjct: 136 GVAPQEDAIKLSHDYGVGVASTLDLRFLCVMAGHKPE-----GLGKLSKT----HLNYTL 186
Query: 156 KEIEAVTPPNWNAWVFTDKQVLHAVEEARGCYIVADKL 193
+ + NW A KQ+ +A +A + KL
Sbjct: 187 DKHWRLACSNWEAKNLEPKQLDYAANDALMAVAIYQKL 224
>gi|125525535|gb|EAY73649.1| hypothetical protein OsI_01538 [Oryza sativa Indica Group]
Length = 288
Score = 37.4 bits (85), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 37/132 (28%), Positives = 59/132 (44%), Gaps = 10/132 (7%)
Query: 57 MLILSAANLCLAIQLCRLS---RIPESVTNFLADRTICFVGFGVDKKTASIHGKTGYPRN 113
+L L A + CL +QL ++ R+P V + LAD ++ VG G+ + A + GY
Sbjct: 143 ILQLCAGDSCLILQLLHVAGARRVPPLVGDLLADPSVRLVGIGIGENAAKL--ADGYGVR 200
Query: 114 CDTGIDLGHLAARVLKKPKLIGLTGIAELAKEVGIDHNSLSNKEIEAVTPPNWNAWVFTD 173
C +DL + R L + G+ +EV L+ ++ VT +W
Sbjct: 201 CAAPVDLEDVCDRRLGRLPGARRLGLKGYVREV----LGLTMEKPMDVTRSDWERRHLDA 256
Query: 174 KQVLHAVEEARG 185
QV +A ARG
Sbjct: 257 AQVRYAC-SARG 267
>gi|242001434|ref|XP_002435360.1| 3-5 exonuclease, putative [Ixodes scapularis]
gi|215498690|gb|EEC08184.1| 3-5 exonuclease, putative [Ixodes scapularis]
Length = 587
Score = 37.0 bits (84), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 46/187 (24%), Positives = 82/187 (43%), Gaps = 35/187 (18%)
Query: 27 KISELSGMLFKMRRVVGFDVKFNS----QTRIAEMLILSAANLCLAIQLCRLSR------ 76
+I ++ L + V+G D ++ + + R+A + + AN + ++LC+ +
Sbjct: 45 RIEDVFCRLCREAGVLGLDSEWTTVQGHRHRVALLQLAPNANFSVLLRLCQFTEEASTVT 104
Query: 77 IPESVTNFLADRTICFVGFGVDKKTASIHGKTGYPRNCDTGIDL-GHLAARVLKKPKLIG 135
+PES+ + L D I VG GV + D GID+ G L R
Sbjct: 105 LPESLRDILKDVKIIKVGVGVIDDAHKLFQ--------DYGIDVWGCLDLR-------HA 149
Query: 136 LTGIAELAKEVGIDHNSLSNKEIEAVTP--------PNWNAWVFTDKQVLHAVEEARGCY 187
L + EL + SLS + + V+P NW A V T+KQ+ +A ++A
Sbjct: 150 LGCLPELGHFPKVGLRSLS-ESLLGVSPDKSWRLRCSNWEADVLTEKQIRYAADDALLAV 208
Query: 188 IVADKLL 194
+ D+++
Sbjct: 209 QIFDQMI 215
>gi|358465712|ref|ZP_09175614.1| hypothetical protein HMPREF9093_00073 [Fusobacterium sp. oral taxon
370 str. F0437]
gi|357069744|gb|EHI79620.1| hypothetical protein HMPREF9093_00073 [Fusobacterium sp. oral taxon
370 str. F0437]
Length = 243
Score = 37.0 bits (84), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 37/72 (51%), Gaps = 8/72 (11%)
Query: 42 VGFDVKFNSQTRIA---EMLILSAANLCLAIQLCRLSRIPESVT-----NFLADRTICFV 93
+ ++ K N R++ E LILS + +A C+ R+ ++++ NFL + CF+
Sbjct: 19 MAYEDKENKMLRVSAESEQLILSLDGIHIATDFCKARRVEKAISEKLSQNFLNNIRACFL 78
Query: 94 GFGVDKKTASIH 105
F +K T IH
Sbjct: 79 SFDKNKDTVIIH 90
>gi|297800892|ref|XP_002868330.1| hypothetical protein ARALYDRAFT_493524 [Arabidopsis lyrata subsp.
lyrata]
gi|297314166|gb|EFH44589.1| hypothetical protein ARALYDRAFT_493524 [Arabidopsis lyrata subsp.
lyrata]
Length = 286
Score = 37.0 bits (84), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 42/175 (24%), Positives = 74/175 (42%), Gaps = 29/175 (16%)
Query: 23 VIDKKISELSGMLFKMRRVVGFDVKFNSQTR-------IAEMLILSAANLCLAIQLCRLS 75
V+D K +E SG R +VGFD+++ R +A + I N C + + S
Sbjct: 115 VLDTKRNE-SG-----RAIVGFDIEWRPSLRKGVLPGKVATVQICVDNNYCDVMHIVH-S 167
Query: 76 RIPESVTNFLADRTICFVGFGVDKKTASIHGKTGYPRNCDTGIDLGHLAARVLKKPKLIG 135
IP+ + + + D T+ VG G+D + + G + DL LA + + K G
Sbjct: 168 GIPQRLQHLIEDSTLVKVGIGIDGDSVKLFHDYGV--SIKDVEDLSDLANQKIGGEKKWG 225
Query: 136 LTGIAELAKEVGIDHNSLSNKEI---EAVTPPNWNAWVFTDKQVLHAVEEARGCY 187
L + E +L KE+ + NW + + +Q+ +A +A +
Sbjct: 226 LASLTE----------TLVCKELLKPNRIRLGNWEVYPLSKQQLQYAATDAYASW 270
>gi|410962527|ref|XP_003987820.1| PREDICTED: LOW QUALITY PROTEIN: exonuclease 3'-5' domain-containing
protein 2 [Felis catus]
Length = 621
Score = 36.6 bits (83), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 40/155 (25%), Positives = 76/155 (49%), Gaps = 21/155 (13%)
Query: 41 VVGFDVKF-NSQTRIAEMLIL---SAANLCLAIQLCRLSR----IPESVTNFLADRTICF 92
V+G D ++ NS+ + + + +L S++ C+ ++L +L R +P ++ + LAD +I
Sbjct: 104 VLGIDCEWVNSEGKASPLSLLQMASSSGFCVLVRLPKLIRGGKTLPXTLLDILADGSILK 163
Query: 93 VGFGVDKKTASIHGKTGYP-RNCDTGIDLGHLAARVLKKPKLIGLT--GIAELAKEVGID 149
VG G + + + G + C +DL +LA R GL+ +AE +D
Sbjct: 164 VGVGSSEDASKLLQDYGLVVKGC---LDLRYLAMRQRNNLLCNGLSLKSLAETVLNFPLD 220
Query: 150 HNSLSNKEIEAVTPPNWNAWVFTDKQVLHAVEEAR 184
+ L + NW+A T+ QV++A +A+
Sbjct: 221 KSLL-------LRCSNWDAENLTEDQVIYAARDAQ 248
>gi|413949087|gb|AFW81736.1| hypothetical protein ZEAMMB73_851303 [Zea mays]
Length = 1027
Score = 36.6 bits (83), Expect = 5.0, Method: Composition-based stats.
Identities = 35/156 (22%), Positives = 73/156 (46%), Gaps = 10/156 (6%)
Query: 41 VVGFDVKF--NSQTRIAEMLILSAANLCLAIQLCRLSRIPESVTNFLADRTICFVGFGVD 98
+VG D ++ N + RIA ++ + CL ++ IP+++ +FLAD FVG +
Sbjct: 296 IVGLDTEWFENDRKRIA-LIQICVDKKCLLFKVGIAGDIPDNLKSFLADEDHVFVGVAIA 354
Query: 99 KKTASIHGKTGYPRNCDTGIDLGHLAARVLKKPKLIGLTGIAELAKE-VGIDHNSLSNKE 157
+ + G+ ++L +A ++ + + +A LA+E +G+ ++ K
Sbjct: 355 NDLDRL--REGHQIELSNKVELQAMAPFIISDRQWNNVPSLATLAQELLGV---AIGGKG 409
Query: 158 IEAVTPPNWNAWVFTDKQVLHAVEEARGCYIVADKL 193
V +W+ T+ Q+ +A + Y+V D +
Sbjct: 410 TN-VRYKHWDNKQLTENQIKYACTDVVVPYMVGDMI 444
>gi|440907539|gb|ELR57678.1| Werner syndrome ATP-dependent helicase [Bos grunniens mutus]
Length = 1430
Score = 36.6 bits (83), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 34/164 (20%), Positives = 73/164 (44%), Gaps = 19/164 (11%)
Query: 41 VVGFDVKF------NSQTRIAEMLILSAANLCLAIQLCRLSRIPESVTNFLADRTICFVG 94
VVGFD+++ + +R+A + + A + C + +S P+ + L + I G
Sbjct: 76 VVGFDIEWPPAYKKGTLSRVALIQLCVAESKCYLFHISSMSGFPQGLKMLLENEAIKKAG 135
Query: 95 FGVDKKTASIHGKTGYPRNCDTGIDLGHLAARVLKKPKLIGLTGIAE--LAKEVGIDHNS 152
G+++ + + N + ++L +A LK + L G+ + K++ D
Sbjct: 136 VGIEQDQWKLL--RDFDINLKSIVELTDVANEKLKCIETWSLNGLVKYLFGKQLLKDR-- 191
Query: 153 LSNKEIEAVTPPNWNAWVFTDKQVLHAVEEARGCYIVADKLLSL 196
++ NW+ + T+ Q ++A +A +I+ KL +L
Sbjct: 192 -------SIRCSNWSRFPLTEDQKVYAATDAYAGFIIYQKLANL 228
>gi|443693142|gb|ELT94573.1| hypothetical protein CAPTEDRAFT_228908 [Capitella teleta]
Length = 584
Score = 36.6 bits (83), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 38/148 (25%), Positives = 68/148 (45%), Gaps = 16/148 (10%)
Query: 41 VVGFDVKFNSQTR--IAEMLILSAANLCLAIQLCRL-SRIPESVTNFLADRTICFVGFGV 97
V+G D ++ ++ +A + I + + LCL I+L ++ + IP + LAD+ I VG +
Sbjct: 90 VLGLDCEWCQKSSFGVALLQIATHSGLCLLIRLYKMQADIPRGLVELLADKKILKVGVAI 149
Query: 98 DKKTASIHGKTGYPRNCDTG-IDLGHLAARV-LKKPKLIGLTGIAELAKEVGIDHNSLSN 155
+ C G ++L +LA R ++ + L +AE + ID
Sbjct: 150 TSDADKLFNSFDL---CTLGCVELCNLADRSRIRMDEGRSLAALAEQTVGLRIDKG---- 202
Query: 156 KEIEAVTPPNWNAWVFTDKQVLHAVEEA 183
V NW A V ++ QV++A +A
Sbjct: 203 ----VVRSGNWEADVLSEAQVMYAATDA 226
>gi|156400872|ref|XP_001639016.1| predicted protein [Nematostella vectensis]
gi|156226141|gb|EDO46953.1| predicted protein [Nematostella vectensis]
Length = 485
Score = 36.6 bits (83), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 36/132 (27%), Positives = 59/132 (44%), Gaps = 16/132 (12%)
Query: 54 IAEMLILSAANLCLAIQLCRLS-RIPESVTNFLADRTICFVGFGVDKKTASIHGKTGYP- 111
+A + I + N C I+LC++S +P ++ L DR + G G+ + G
Sbjct: 21 VALLQIATPLNDCFLIRLCKMSGAVPPTLKGLLEDRAVLKFGVGIMDDAKKLSDTFGLAV 80
Query: 112 RNCDTGIDLGHLAARVLKKPKLIGLTGIAELAKEVGIDHNSLSNKEIEAVTPPNWNAWVF 171
C +DL HL VL++ KL L +A+ V +D + V NW
Sbjct: 81 SGC---VDLRHL---VLRQGKL-SLGALAQRFLGVRMDKSW-------HVQCSNWEVEHL 126
Query: 172 TDKQVLHAVEEA 183
+D+QV +A +A
Sbjct: 127 SDRQVAYAANDA 138
>gi|195329844|ref|XP_002031620.1| GM26098 [Drosophila sechellia]
gi|194120563|gb|EDW42606.1| GM26098 [Drosophila sechellia]
Length = 583
Score = 36.6 bits (83), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 36/158 (22%), Positives = 66/158 (41%), Gaps = 15/158 (9%)
Query: 40 RVVGFDVKF----NSQTRIAEMLILSAANLCLAIQLCRLSRIPESVTNFLADRTICFVGF 95
+V+GFD ++ S+ +A + + S LC +LC + +IP+ + L D + VG
Sbjct: 78 KVLGFDCEWITVGGSRRPVALLQLSSHRGLCALFRLCHMKQIPKDLRELLEDDDVIKVGV 137
Query: 96 GVDKKTASIHGKTGYPRNCDTGIDLGHLAARVLKKPKLIGLTGIAELAKEVGIDHNSLSN 155
+ + G + +DL L KP+ G+ +L+K H + +
Sbjct: 138 APQEDAMKLSHDYGV--GVASTLDLRFLCVMAGHKPE-----GLGKLSKT----HLNYTL 186
Query: 156 KEIEAVTPPNWNAWVFTDKQVLHAVEEARGCYIVADKL 193
+ + NW A KQ+ +A +A + KL
Sbjct: 187 DKHWRLACSNWEAKTLEPKQLDYAANDALMAVAIYQKL 224
>gi|314122235|ref|NP_001186629.1| exonuclease 3'-5' domain-containing protein 2 [Gallus gallus]
Length = 621
Score = 36.6 bits (83), Expect = 6.4, Method: Composition-based stats.
Identities = 37/154 (24%), Positives = 67/154 (43%), Gaps = 19/154 (12%)
Query: 41 VVGFDVKFNS----QTRIAEMLILSAANLCLAIQLCRL----SRIPESVTNFLADRTICF 92
V+G D ++ S ++ + + SA+ LC+ ++L RL +P+++ + +AD +
Sbjct: 106 VLGMDCEWVSVEGKANPVSLLQMASASGLCVLVRLPRLVASGQPVPKTLLDIMADDAVLK 165
Query: 93 VGFGVDKKTASIHGKTGYPRNCDTGIDLGHLAARVLKK--PKLIGLTGIAELAKEVGIDH 150
VG G + + P +DL +LA R K + L +AE +D
Sbjct: 166 VGVGCWEDACKLLQDYSLP--VKGSVDLRYLAMRQRKDLLHNCLSLKSLAEKVLNCPLDK 223
Query: 151 NSLSNKEIEAVTPPNWNAWVFTDKQVLHAVEEAR 184
+ + NW A T QVL+A +A+
Sbjct: 224 SP-------HMRCSNWEAEELTQDQVLYAARDAQ 250
>gi|8922631|ref|NP_060669.1| exonuclease 3'-5' domain-containing protein 2 isoform 2 [Homo
sapiens]
gi|7022954|dbj|BAA91781.1| unnamed protein product [Homo sapiens]
gi|12805017|gb|AAH01962.1| Exonuclease 3'-5' domain containing 2 [Homo sapiens]
Length = 496
Score = 36.2 bits (82), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 36/133 (27%), Positives = 62/133 (46%), Gaps = 17/133 (12%)
Query: 59 ILSAANLCLAIQLCRL----SRIPESVTNFLADRTICFVGFGVDKKTASIHGKTGY-PRN 113
+ S + LC+ ++L +L +P ++ + LAD TI VG G + + + G R
Sbjct: 1 MASPSGLCVLVRLPKLICGGKTLPRTLLDILADGTILKVGVGCSEDASKLLQDYGLVVRG 60
Query: 114 CDTGIDLGHLAARVLKKPKLIGLT--GIAELAKEVGIDHNSLSNKEIEAVTPPNWNAWVF 171
C +DL +LA R GL+ +AE +D + L + NW+A
Sbjct: 61 C---LDLRYLAMRQRNNLLCNGLSLKSLAETVLNFPLDKSLL-------LRCSNWDAETL 110
Query: 172 TDKQVLHAVEEAR 184
T+ QV++A +A+
Sbjct: 111 TEDQVIYAARDAQ 123
>gi|426377292|ref|XP_004055402.1| PREDICTED: exonuclease 3'-5' domain-containing protein 2 isoform 5
[Gorilla gorilla gorilla]
gi|426377294|ref|XP_004055403.1| PREDICTED: exonuclease 3'-5' domain-containing protein 2 isoform 6
[Gorilla gorilla gorilla]
gi|426377296|ref|XP_004055404.1| PREDICTED: exonuclease 3'-5' domain-containing protein 2 isoform 7
[Gorilla gorilla gorilla]
Length = 496
Score = 36.2 bits (82), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 36/133 (27%), Positives = 62/133 (46%), Gaps = 17/133 (12%)
Query: 59 ILSAANLCLAIQLCRL----SRIPESVTNFLADRTICFVGFGVDKKTASIHGKTGY-PRN 113
+ S + LC+ ++L +L +P ++ + LAD TI VG G + + + G R
Sbjct: 1 MASPSGLCVLVRLPKLICGGKTLPRTLLDILADGTILKVGVGCSEDASKLLQDYGLVVRG 60
Query: 114 CDTGIDLGHLAARVLKKPKLIGLT--GIAELAKEVGIDHNSLSNKEIEAVTPPNWNAWVF 171
C +DL +LA R GL+ +AE +D + L + NW+A
Sbjct: 61 C---LDLRYLAMRQRNNLLCNGLSLKSLAETVLNFPLDKSLL-------LRCSNWDAETL 110
Query: 172 TDKQVLHAVEEAR 184
T+ QV++A +A+
Sbjct: 111 TEDQVIYAARDAQ 123
>gi|193786324|dbj|BAG51607.1| unnamed protein product [Homo sapiens]
Length = 496
Score = 36.2 bits (82), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 36/133 (27%), Positives = 62/133 (46%), Gaps = 17/133 (12%)
Query: 59 ILSAANLCLAIQLCRL----SRIPESVTNFLADRTICFVGFGVDKKTASIHGKTGY-PRN 113
+ S + LC+ ++L +L +P ++ + LAD TI VG G + + + G R
Sbjct: 1 MASPSGLCVLVRLPKLICGGKTLPRTLLDILADGTILKVGVGCSEDASKLLQDYGLVVRG 60
Query: 114 CDTGIDLGHLAARVLKKPKLIGLT--GIAELAKEVGIDHNSLSNKEIEAVTPPNWNAWVF 171
C +DL +LA R GL+ +AE +D + L + NW+A
Sbjct: 61 C---LDLRYLAMRQRNNLLCNGLSLKSLAETVLNFPLDKSLL-------LRCSNWDAETL 110
Query: 172 TDKQVLHAVEEAR 184
T+ QV++A +A+
Sbjct: 111 TEDQVIYAARDAQ 123
>gi|114653649|ref|XP_001141295.1| PREDICTED: exonuclease 3'-5' domain-containing protein 2 isoform 4
[Pan troglodytes]
Length = 496
Score = 36.2 bits (82), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 36/133 (27%), Positives = 62/133 (46%), Gaps = 17/133 (12%)
Query: 59 ILSAANLCLAIQLCRL----SRIPESVTNFLADRTICFVGFGVDKKTASIHGKTGY-PRN 113
+ S + LC+ ++L +L +P ++ + LAD TI VG G + + + G R
Sbjct: 1 MASPSGLCVLVRLPKLICGGKTLPRTLLDILADGTILKVGVGCSEDASKLLQDYGLVVRG 60
Query: 114 CDTGIDLGHLAARVLKKPKLIGLT--GIAELAKEVGIDHNSLSNKEIEAVTPPNWNAWVF 171
C +DL +LA R GL+ +AE +D + L + NW+A
Sbjct: 61 C---LDLRYLAMRQRNNLLCNGLSLKSLAETVLNFPLDKSLL-------LRCSNWDAETL 110
Query: 172 TDKQVLHAVEEAR 184
T+ QV++A +A+
Sbjct: 111 TEDQVIYAARDAQ 123
>gi|158258563|dbj|BAF85252.1| unnamed protein product [Homo sapiens]
Length = 496
Score = 36.2 bits (82), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 36/133 (27%), Positives = 62/133 (46%), Gaps = 17/133 (12%)
Query: 59 ILSAANLCLAIQLCRL----SRIPESVTNFLADRTICFVGFGVDKKTASIHGKTGY-PRN 113
+ S + LC+ ++L +L +P ++ + LAD TI VG G + + + G R
Sbjct: 1 MASPSGLCVLVRLPKLICGGKTLPRTLLDILADGTILKVGVGCSEDASKLLQDYGLVVRG 60
Query: 114 CDTGIDLGHLAARVLKKPKLIGLT--GIAELAKEVGIDHNSLSNKEIEAVTPPNWNAWVF 171
C +DL +LA R GL+ +AE +D + L + NW+A
Sbjct: 61 C---LDLRYLAMRQRNNLLCNGLSLKSLAETVLNFPLDKSLL-------LRCSNWDAETL 110
Query: 172 TDKQVLHAVEEAR 184
T+ QV++A +A+
Sbjct: 111 TEDQVIYAARDAQ 123
>gi|297823419|ref|XP_002879592.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297325431|gb|EFH55851.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 153
Score = 36.2 bits (82), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 23/40 (57%)
Query: 55 AEMLILSAANLCLAIQLCRLSRIPESVTNFLADRTICFVG 94
++L L CL IQL R+P+ + +FL D TI FVG
Sbjct: 9 PDILQLCVGTRCLIIQLSHCKRMPDVLRSFLEDETITFVG 48
>gi|397507307|ref|XP_003824142.1| PREDICTED: exonuclease 3'-5' domain-containing protein 2 isoform 5
[Pan paniscus]
gi|397507309|ref|XP_003824143.1| PREDICTED: exonuclease 3'-5' domain-containing protein 2 isoform 6
[Pan paniscus]
Length = 496
Score = 36.2 bits (82), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 36/133 (27%), Positives = 62/133 (46%), Gaps = 17/133 (12%)
Query: 59 ILSAANLCLAIQLCRL----SRIPESVTNFLADRTICFVGFGVDKKTASIHGKTGY-PRN 113
+ S + LC+ ++L +L +P ++ + LAD TI VG G + + + G R
Sbjct: 1 MASPSGLCVLVRLPKLICGGKTLPRTLLDILADGTILKVGVGCSEDASKLLQDYGLIVRG 60
Query: 114 CDTGIDLGHLAARVLKKPKLIGLT--GIAELAKEVGIDHNSLSNKEIEAVTPPNWNAWVF 171
C +DL +LA R GL+ +AE +D + L + NW+A
Sbjct: 61 C---LDLRYLAMRQRNNLLCNGLSLKSLAETVLNFPLDKSLL-------LRCSNWDAETL 110
Query: 172 TDKQVLHAVEEAR 184
T+ QV++A +A+
Sbjct: 111 TEDQVIYAARDAQ 123
>gi|50949589|emb|CAD39094.2| hypothetical protein [Homo sapiens]
Length = 496
Score = 36.2 bits (82), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 36/133 (27%), Positives = 62/133 (46%), Gaps = 17/133 (12%)
Query: 59 ILSAANLCLAIQLCRL----SRIPESVTNFLADRTICFVGFGVDKKTASIHGKTGY-PRN 113
+ S + LC+ ++L +L +P ++ + LAD TI VG G + + + G R
Sbjct: 1 MASPSGLCVLVRLPKLICGGKTLPRTLLDILADGTILKVGVGCSEDASKLLQDYGLVVRG 60
Query: 114 CDTGIDLGHLAARVLKKPKLIGLT--GIAELAKEVGIDHNSLSNKEIEAVTPPNWNAWVF 171
C +DL +LA R GL+ +AE +D + L + NW+A
Sbjct: 61 C---LDLRYLAMRQRNNLLCNGLSLKSLAETVLNFPLDKSLL-------LRCSNWDAETL 110
Query: 172 TDKQVLHAVEEAR 184
T+ QV++A +A+
Sbjct: 111 TEDQVIYAARDAQ 123
>gi|449274706|gb|EMC83784.1| Exonuclease 3'-5' domain-containing protein 2 [Columba livia]
Length = 607
Score = 36.2 bits (82), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 38/154 (24%), Positives = 66/154 (42%), Gaps = 19/154 (12%)
Query: 41 VVGFDVKFNS----QTRIAEMLILSAANLCLAIQLCRL----SRIPESVTNFLADRTICF 92
V+G D ++ S ++ + + S + C+ ++L RL IP+++ + +AD +
Sbjct: 106 VLGIDCEWVSVEGKANPVSLLQMASFSGFCVLVRLSRLVASGQTIPKTLLDIMADSAVLK 165
Query: 93 VGFGVDKKTASIHGKTGYPRNCDTGIDLGHLAARVLKK--PKLIGLTGIAELAKEVGIDH 150
VG G + + G P +DL +LA R K + L +AE +D
Sbjct: 166 VGVGCWEDACKLLHDYGLP--VKGSVDLRYLAMRQRKDLLHSCLSLKSLAEKVLNCPLDK 223
Query: 151 NSLSNKEIEAVTPPNWNAWVFTDKQVLHAVEEAR 184
+ V NW A T QVL+A +A+
Sbjct: 224 SP-------HVRCSNWEAEELTPDQVLYAARDAQ 250
>gi|297695398|ref|XP_002824930.1| PREDICTED: exonuclease 3'-5' domain-containing protein 2 isoform 4
[Pongo abelii]
gi|297695400|ref|XP_002824931.1| PREDICTED: exonuclease 3'-5' domain-containing protein 2 isoform 5
[Pongo abelii]
Length = 496
Score = 36.2 bits (82), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 36/133 (27%), Positives = 62/133 (46%), Gaps = 17/133 (12%)
Query: 59 ILSAANLCLAIQLCRL----SRIPESVTNFLADRTICFVGFGVDKKTASIHGKTGY-PRN 113
+ S + LC+ ++L +L +P ++ + LAD TI VG G + + + G R
Sbjct: 1 MASPSGLCVLVRLPKLICGGKTLPRTLLDILADGTILKVGVGCSEDASKLLQDYGLVVRG 60
Query: 114 CDTGIDLGHLAARVLKKPKLIGLT--GIAELAKEVGIDHNSLSNKEIEAVTPPNWNAWVF 171
C +DL +LA R GL+ +AE +D + L + NW+A
Sbjct: 61 C---LDLRYLAMRQRNNLLCNGLSLKSLAETVLNFPLDKSLL-------LRCSNWDAETL 110
Query: 172 TDKQVLHAVEEAR 184
T+ QV++A +A+
Sbjct: 111 TEDQVIYAARDAQ 123
>gi|449675992|ref|XP_002154256.2| PREDICTED: probable exonuclease mut-7 homolog [Hydra
magnipapillata]
Length = 610
Score = 36.2 bits (82), Expect = 8.2, Method: Composition-based stats.
Identities = 35/145 (24%), Positives = 66/145 (45%), Gaps = 20/145 (13%)
Query: 6 LEIKDVKFKVSVIDDADVIDK--KISELSGMLFKMRRVVGFDVKFN-SQTRIAEM----- 57
LE + KFK+ + D ++D K+ E +LFK ++V+GFD ++ S TR E
Sbjct: 336 LENQFYKFKLP-LKDVIIVDTIPKLIEAEKILFKPKQVIGFDTEWKPSFTRAGEQDKVST 394
Query: 58 LILSAANLCLAIQLCRL-------SRIPESVTNFLADRTICFVGFGVDKKTASIHGKTGY 110
L L+ + + + +L + + E F + + +G+G+ + G Y
Sbjct: 395 LQLAVIDKVFIVDMLQLYVADSAENALREFFYKFFTSKDVVKIGYGIVGDLKILIGMFAY 454
Query: 111 PR----NCDTGIDLGHLAARVLKKP 131
+ N +DL ++ ++LK P
Sbjct: 455 MKEFILNASNLVDLNEISEKILKYP 479
>gi|301763301|ref|XP_002917070.1| PREDICTED: exonuclease 3'-5' domain-containing protein 2-like
[Ailuropoda melanoleuca]
gi|281349384|gb|EFB24968.1| hypothetical protein PANDA_005241 [Ailuropoda melanoleuca]
Length = 622
Score = 35.8 bits (81), Expect = 9.4, Method: Composition-based stats.
Identities = 38/155 (24%), Positives = 74/155 (47%), Gaps = 21/155 (13%)
Query: 41 VVGFDVKF-NSQTRIAEMLILSAAN---LCLAIQLCRL----SRIPESVTNFLADRTICF 92
V+G D ++ NS+ + + + +L A+ C+ ++L +L +P+++ + L D T+
Sbjct: 105 VLGIDCEWVNSEGKASPLSLLQVASPSGFCVLVRLPKLICGGKTLPKTLLDMLVDGTVFK 164
Query: 93 VGFGVDKKTASIHGKTGYP-RNCDTGIDLGHLAARVLKKPKLIGLT--GIAELAKEVGID 149
VG G + + + G + C +DL +LA R GL+ +AE +D
Sbjct: 165 VGVGCSEDASRLLRDYGLVVKGC---LDLRYLAVRQGNNLLCNGLSLKSLAETVLNFPLD 221
Query: 150 HNSLSNKEIEAVTPPNWNAWVFTDKQVLHAVEEAR 184
+ L + NW+A T+ QV++A +A+
Sbjct: 222 KSLL-------LRCSNWDAENLTEDQVIYAARDAQ 249
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.323 0.138 0.407
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 2,868,943,772
Number of Sequences: 23463169
Number of extensions: 106532155
Number of successful extensions: 237563
Number of sequences better than 100.0: 228
Number of HSP's better than 100.0 without gapping: 34
Number of HSP's successfully gapped in prelim test: 194
Number of HSP's that attempted gapping in prelim test: 237432
Number of HSP's gapped (non-prelim): 231
length of query: 198
length of database: 8,064,228,071
effective HSP length: 135
effective length of query: 63
effective length of database: 9,191,667,552
effective search space: 579075055776
effective search space used: 579075055776
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 73 (32.7 bits)