Query 039661
Match_columns 597
No_of_seqs 302 out of 987
Neff 5.5
Searched_HMMs 29240
Date Mon Mar 25 20:40:29 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/039661.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/039661hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3hve_A Gigaxonin; ubiquitin, c 99.9 1.6E-26 5.6E-31 231.4 5.7 226 1-307 25-256 (256)
2 3i3n_A Kelch-like protein 11; 99.9 5.7E-26 2E-30 230.5 4.7 225 3-309 28-265 (279)
3 2vkp_A BTB/POZ domain-containi 99.8 4.8E-21 1.7E-25 167.3 10.4 102 1-112 2-107 (109)
4 3htm_A Speckle-type POZ protei 99.8 9.2E-21 3.2E-25 177.6 11.8 128 3-148 30-161 (172)
5 2if5_A Zinc finger and BTB dom 99.8 1.2E-20 4E-25 168.0 10.2 100 3-111 21-120 (120)
6 4eoz_A Speckle-type POZ protei 99.8 3.9E-21 1.3E-25 175.3 5.9 119 3-139 21-140 (145)
7 1r29_A B-cell lymphoma 6 prote 99.8 1.5E-20 5.1E-25 169.2 8.9 100 3-112 25-125 (127)
8 3b84_A Zinc finger and BTB dom 99.8 5.9E-21 2E-25 170.6 5.5 97 3-112 20-116 (119)
9 2ppi_A Gigaxonin; BTB domain, 99.8 2.2E-20 7.4E-25 172.9 8.7 103 1-111 41-144 (144)
10 2z8h_A Transcription regulator 99.8 1.6E-20 5.6E-25 171.9 7.5 101 3-114 32-134 (138)
11 2vpk_A Myoneurin; transcriptio 99.8 1.6E-20 5.6E-25 166.4 7.3 97 3-112 18-116 (116)
12 1buo_A POZ domain, protein (pr 99.8 2E-20 7E-25 167.4 7.7 96 3-112 24-119 (121)
13 3ohu_A Transcription regulator 99.8 9.5E-21 3.2E-25 170.0 2.8 97 3-110 28-125 (125)
14 3ga1_A Nucleus accumbens-assoc 99.8 2.2E-20 7.6E-25 168.9 5.2 97 3-112 29-126 (129)
15 2q81_A MIZ-1 protein; BTB/POZ 99.8 2.4E-20 8.1E-25 166.7 5.3 95 3-111 23-117 (119)
16 2yy9_A Zinc finger and BTB dom 99.8 1.5E-20 5.1E-25 171.9 4.0 98 2-112 20-117 (135)
17 2ihc_A Transcription regulator 99.8 1.2E-20 4.1E-25 169.8 3.2 98 3-111 25-123 (124)
18 3m5b_A Zinc finger and BTB dom 99.8 1.7E-19 5.7E-24 162.3 6.6 92 3-112 26-117 (119)
19 3hqi_A Speckle-type POZ protei 99.8 1.2E-18 4.3E-23 178.8 11.3 129 3-149 170-302 (312)
20 3fkc_A Transcriptional regulat 99.7 4.8E-18 1.7E-22 151.5 6.5 85 3-95 27-112 (116)
21 2ast_A S-phase kinase-associat 99.4 7.2E-13 2.5E-17 124.9 7.9 93 10-112 3-124 (159)
22 4ajy_C Transcription elongatio 99.2 2.6E-11 9E-16 105.2 7.7 80 10-93 4-97 (97)
23 1fs1_B SKP1, cyclin A/CDK2-ass 99.0 4.3E-10 1.5E-14 104.1 7.9 89 10-112 4-119 (141)
24 2p1m_A SKP1-like protein 1A; F 98.8 2.7E-10 9.4E-15 107.5 -0.3 90 10-112 6-123 (160)
25 1hv2_A Elongin C, ELC1; protei 98.3 9.9E-07 3.4E-11 76.9 7.7 80 9-93 5-99 (99)
26 2fnj_C Transcription elongatio 98.3 8.4E-07 2.9E-11 76.9 6.2 80 10-93 3-96 (96)
27 3v7d_A Suppressor of kinetocho 98.3 1.8E-06 6.3E-11 82.2 8.8 95 9-112 8-131 (169)
28 1vcb_B Protein (elongin C); tu 97.7 3.9E-05 1.3E-09 68.4 5.4 80 10-93 19-112 (112)
29 3drz_A BTB/POZ domain-containi 97.4 0.00065 2.2E-08 59.6 9.7 94 9-111 7-105 (107)
30 3drx_A BTB/POZ domain-containi 95.3 0.036 1.2E-06 54.2 7.7 95 9-112 13-112 (202)
31 3kvt_A Potassium channel prote 94.5 0.014 4.7E-07 52.1 2.1 83 10-95 7-91 (115)
32 1s1g_A Potassium voltage-gated 92.8 0.11 3.6E-06 47.0 4.9 81 9-95 14-98 (124)
33 1t1d_A Protein (potassium chan 92.5 0.18 6E-06 43.8 5.7 83 10-95 3-88 (100)
34 2nz0_B Potassium voltage-gated 90.9 0.13 4.6E-06 47.3 3.3 82 8-95 35-120 (140)
35 1nn7_A Potassium channel KV4.2 90.6 0.13 4.4E-06 44.9 2.8 80 10-95 2-85 (105)
36 2eqx_A Kelch repeat and BTB do 84.8 0.6 2E-05 40.2 3.3 36 192-230 46-81 (105)
37 3vmx_A Voltage-gated hydrogen 68.1 3.6 0.00012 31.1 2.9 28 519-546 12-39 (48)
38 1pd7_B MAD1; PAH2, SIN3, eukar 61.7 1.8 6.1E-05 28.6 0.1 16 79-94 3-18 (26)
39 3vp9_A General transcriptional 58.6 5 0.00017 34.4 2.4 30 514-543 46-75 (92)
40 2r9r_B Paddle chimera voltage 53.0 13 0.00045 40.7 5.3 84 9-95 53-139 (514)
41 2yy0_A C-MYC-binding protein; 49.6 7.1 0.00024 30.1 1.7 34 502-543 18-51 (53)
42 3a2a_A Voltage-gated hydrogen 49.5 16 0.00056 28.3 3.7 26 521-546 21-46 (58)
43 1vjh_A BET V I allergen family 48.5 12 0.00042 32.9 3.4 33 385-428 90-122 (122)
44 1deb_A APC protein, adenomatou 30.6 20 0.00069 27.3 1.5 36 501-544 15-50 (54)
45 3b0b_C CENP-X, centromere prot 23.5 53 0.0018 27.3 3.0 43 330-386 6-48 (81)
No 1
>3hve_A Gigaxonin; ubiquitin, cytoplasm, cytoskeleton, disease mutation, kelch repeat, neurodegeneration, phosphoprotein, polymorphism, UBL conjugation; 2.80A {Homo sapiens} PDB: 3hve_B
Probab=99.92 E-value=1.6e-26 Score=231.44 Aligned_cols=226 Identities=14% Similarity=0.121 Sum_probs=162.2
Q ss_pred CCCCCCCeeEEEEECCEEEEeehhhhhccCHHHHHHHhccCCC-CCccceEEecCCCCCHHHHHHHHHHHhCCCcccchh
Q 039661 1 LCTSGLPSDVTIEVGEMSFHLHKFPLLSRSGLLEKLIEEFCSG-DRSVCVLKLDGIPGGAKSFELVIKFCYGVKIELTAL 79 (597)
Q Consensus 1 ~~~~g~~~DV~I~Vg~~~F~lHK~vLas~S~yfr~lf~~~~~e-~~~~~~i~L~d~pGgae~felv~~FcYg~~i~it~~ 79 (597)
++.+|.+|||+|.|||+.|++||.+|+++|+||++||++++.+ ++...+|.|++++ +++|+.+++|+|||++.++.+
T Consensus 25 l~~~~~~~Dv~l~v~~~~f~~Hr~vLaa~S~yF~~mf~~~~~~~e~~~~~i~l~~v~--~~~f~~ll~~~Yt~~~~i~~~ 102 (256)
T 3hve_A 25 FREESRFCDAHLVLDGEEIPVQKNILAAASPYIRTKLNYNPPKDDGSTYKIELEGIS--VMVMREILDYIFSGQIRLNED 102 (256)
T ss_dssp CCC--CCCCEEEEETTEEEEECHHHHHTTCHHHHHTC-----------CEEECSSCC--HHHHHHHHHHHHHSCCCCC-C
T ss_pred HHhcCCCcceEEEECCEEEechHHHHHHcCHHHHHHhCCCCCcccCCCCeEEeCCCC--HHHHHHHHhhccCCCCcccHh
Confidence 3568999999999999999999999999999999999986541 1345789999995 799999999999999999999
Q ss_pred hHhHHHHhhcccccCccCCCCcHHHHHHHHHHH-hhhchhHHHHHHhhhhhHHHHhhhhc---hhhhHHHHHHHHHcCCC
Q 039661 80 NAVGLRCAAEYLHMTDDYGEGNLITQTEAFLND-VFSDWADAIKALETCQQVLPYAQDLH---VVSRCIDSLAMKACADP 155 (597)
Q Consensus 80 NV~~L~cAA~~LqMte~~~~~NL~~~ce~FL~~-vl~sw~dsi~~L~sC~~Llp~Ae~l~---iv~RCidsLA~kac~d~ 155 (597)
||..|+.||.+|||++ |.+.|+.||.+ +. ..||..++.+|+.++ +.+.|.+-|+....
T Consensus 103 ~v~~ll~~A~~l~i~~------l~~~c~~~L~~~l~---------~~n~~~i~~~A~~~~~~~L~~~~~~~i~~~f~--- 164 (256)
T 3hve_A 103 TIQDVVQAADLLLLTD------LKTLCCEFLEGCIA---------AENCIGIRDFALHYCLHHVHYLATEYLETHFR--- 164 (256)
T ss_dssp CHHHHHHHHHHHTCHH------HHHHHHHHHHHTCC---------SSTTHHHHHHHHHTTCHHHHHHHHHHHHHHHH---
T ss_pred HHHHHHHHHHHHChHH------HHHHHHHHHHhhCC---------HhhHHHHHHHHHHcCcHHHHHHHHHHHHHHHH---
Confidence 9999999999999998 99999999999 63 458888999999887 44555555544321
Q ss_pred CCCcCCCcCCCCccccccccCcccCCCCCCCCCCccccccccCChHHHHHHHHHHHhCCCChHHHHHHHHHHHHhhcccc
Q 039661 156 NLFNWPASECNNTQKISIWNGISTATKPKSTGDDWWFGDVSSLSFPLYKLFIFALESRSMKPEKIAASLMCYANRYIPLM 235 (597)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~dWW~EDl~~L~l~lf~rvI~am~~~g~~~e~I~~aL~~Ya~k~lp~l 235 (597)
.+ +-.+++..|+.+.+..+|+.......+++.|..+++.|++...+.
T Consensus 165 -~v-------------------------------~~~~~f~~L~~~~l~~lL~~d~L~v~~E~~v~~av~~W~~~~~~~- 211 (256)
T 3hve_A 165 -DV-------------------------------SSTEEFLELSPQKLKEVISLEKLNVGNERYVFEAVIRWIAHDTEI- 211 (256)
T ss_dssp -HH-------------------------------TTCHHHHSSCHHHHHHHHHCC-------CTTHHHHTTTCCC--CC-
T ss_pred -HH-------------------------------hCCcchhcCCHHHHHHHHccCCCCCCCHHHHHHHHHHHHHcCHHH-
Confidence 00 003688999999999999988877777889999999887432211
Q ss_pred ccCCCCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhcCCCCCcccHHHHHHHHHHHHhhCCC-hHHHHHHHH
Q 039661 236 NRQSSFSSGTNYANPGASISSLSEAEQRALLEEIVDLLPNKREVTSTHLLLKLLRAAMVLHAS-PSCKENLEK 307 (597)
Q Consensus 236 ~r~~~~~~~~~~~~~~~~~~~~~~~~qr~lLE~Iv~lLp~~~~~vs~~fLf~LLR~a~~l~as-~~cr~~LE~ 307 (597)
|. ..-..|++.|.. +.+|..+|...+...-.+..+ +.||.-|++
T Consensus 212 -R~---------------------~~~~~ll~~VRf------~~l~~~~l~~~v~~~~l~~~~~~~c~~ll~~ 256 (256)
T 3hve_A 212 -RK---------------------VHMKDVMSALWV------SGLDSSYLREQMLNEPLVREIVKECSNIPLS 256 (256)
T ss_dssp -ST---------------------TTHHHHHHHHHH------HTTCC-CHHHHHHTSTTHHHHHCC-------
T ss_pred -HH---------------------HHHHHHHHhCCC------CCCCHHHHHHHHhcChHHHhhHHHHHHHhhC
Confidence 11 123569999987 557777899998888888887 689988875
No 2
>3i3n_A Kelch-like protein 11; structural genomics, BTB, KLHL11A, SGC, structural genomics consortium, kelch repeat, secreted, protein binding; 2.60A {Homo sapiens} PDB: 4ap2_A* 4apf_A
Probab=99.91 E-value=5.7e-26 Score=230.49 Aligned_cols=225 Identities=16% Similarity=0.216 Sum_probs=175.4
Q ss_pred CCCCCeeEEEEEC---CEEEEeehhhhhccCHHHHHHHhccCCCCCccceEEec------CCCCCHHHHHHHHHHHhCCC
Q 039661 3 TSGLPSDVTIEVG---EMSFHLHKFPLLSRSGLLEKLIEEFCSGDRSVCVLKLD------GIPGGAKSFELVIKFCYGVK 73 (597)
Q Consensus 3 ~~g~~~DV~I~Vg---~~~F~lHK~vLas~S~yfr~lf~~~~~e~~~~~~i~L~------d~pGgae~felv~~FcYg~~ 73 (597)
.+|.+|||+|.|| |++|++||.+|+++|+||++||++++.+ +....|.|+ ++ .+++|+.+++|+|||+
T Consensus 28 ~~~~~~Dv~l~v~~~~~~~f~~Hr~vLaa~S~yF~~mf~~~~~e-~~~~~i~l~~~~~~~~v--~~~~f~~ll~~~Ytg~ 104 (279)
T 3i3n_A 28 RQGLFCDITLCFGGAGGREFRAHRSVLAAATEYFTPLLSGQFSE-SRSGRVEMRKWSSEPGP--EPDTVEAVIEYMYTGR 104 (279)
T ss_dssp HHTTTCCEEEECC----CEEEECHHHHHHHCTTSGGGCCC---------EEECCCCSSTTCS--CHHHHHHHHHHHHHSE
T ss_pred hcCCCCCeEEEEcCCCCeEEehHHHHHHHcCHHHHHHhcCCCcc-ccCCeEEeccccccCCC--CHHHHHHHHHhhCcCC
Confidence 4689999999998 9999999999999999999999988766 456789998 55 5799999999999999
Q ss_pred cccchhhHhHHHHhhcccccCccCCCCcHHHHHHHHHHH-hhhchhHHHHHHhhhhhHHHHhhhhc---hhhhHHHHHHH
Q 039661 74 IELTALNAVGLRCAAEYLHMTDDYGEGNLITQTEAFLND-VFSDWADAIKALETCQQVLPYAQDLH---VVSRCIDSLAM 149 (597)
Q Consensus 74 i~it~~NV~~L~cAA~~LqMte~~~~~NL~~~ce~FL~~-vl~sw~dsi~~L~sC~~Llp~Ae~l~---iv~RCidsLA~ 149 (597)
+.++.+||..|+.||.+|+|++ |.+.|+.||.+ +. ..||..++.+|+.++ +.++|.+-|+.
T Consensus 105 ~~i~~~~v~~ll~~A~~l~i~~------L~~~c~~~L~~~l~---------~~n~~~i~~~A~~~~~~~L~~~~~~~i~~ 169 (279)
T 3i3n_A 105 IRVSTGSVHEVLELADRFLLIR------LKEFCGEFLKKKLH---------LSNCVAIHSLAHMYTLSQLALKAADMIRR 169 (279)
T ss_dssp EEEETTTHHHHHHHHHHTTCHH------HHHHHHHHHHHHCC---------TTTHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred cccCHHHHHHHHHHHHHHCcHH------HHHHHHHHHHHcCC---------cchHHHHHHHHHHcCcHHHHHHHHHHHHH
Confidence 9999999999999999999998 99999999999 63 468889999999987 44455544433
Q ss_pred HHcCCCCCCcCCCcCCCCccccccccCcccCCCCCCCCCCccccccccCChHHHHHHHHHHHhCCCChHHHHHHHHHHHH
Q 039661 150 KACADPNLFNWPASECNNTQKISIWNGISTATKPKSTGDDWWFGDVSSLSFPLYKLFIFALESRSMKPEKIAASLMCYAN 229 (597)
Q Consensus 150 kac~d~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~dWW~EDl~~L~l~lf~rvI~am~~~g~~~e~I~~aL~~Ya~ 229 (597)
.. ..+ +-.+++..|+.+.+..+|+.......+++.|..+++.|++
T Consensus 170 ~f----~~v-------------------------------~~~~~f~~L~~~~l~~lL~~d~L~v~sE~~vf~av~~W~~ 214 (279)
T 3i3n_A 170 NF----HKV-------------------------------IQDEEFYTLPFHLIRDWLSDLEITVDSEEVLFETVLKWVQ 214 (279)
T ss_dssp TH----HHH-------------------------------TTSSGGGGSCHHHHHHHHTCSSCCCSCHHHHHHHHHHHHH
T ss_pred HH----HHH-------------------------------hcCcChhcCCHHHHHHHhcCcCCCCCCHHHHHHHHHHHHH
Confidence 21 110 0136888999999999999887777789999999999996
Q ss_pred hhccccccCCCCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhcCCCCCcccHHHHHHHHHHHHhhCCChHHHHHHHHHH
Q 039661 230 RYIPLMNRQSSFSSGTNYANPGASISSLSEAEQRALLEEIVDLLPNKREVTSTHLLLKLLRAAMVLHASPSCKENLEKRV 309 (597)
Q Consensus 230 k~lp~l~r~~~~~~~~~~~~~~~~~~~~~~~~qr~lLE~Iv~lLp~~~~~vs~~fLf~LLR~a~~l~as~~cr~~LE~rI 309 (597)
...+. |.. .-..|++.|.. +.+|..+|..+++..-.+..++.|+.-|..-.
T Consensus 215 ~~~~~--r~~---------------------~~~~ll~~VRf------~l~~~~~L~~~v~~~~l~~~~~~c~~~l~ea~ 265 (279)
T 3i3n_A 215 RNAEE--RER---------------------YFEELFKLLRL------SQMKPTYLTRHVKPERLVANNEVCVKLVADAV 265 (279)
T ss_dssp TTHHH--HTT---------------------THHHHHTTSCG------GGSCHHHHHHTTTTSHHHHTCHHHHHHHHHHH
T ss_pred cCHHH--HHH---------------------HHHHHHHhcCC------CCCCHHHHHHHhhccchhcCCHHHHHHHHHHH
Confidence 53221 111 11335555544 67899999999999889999999998776543
No 3
>2vkp_A BTB/POZ domain-containing protein 6; protein-binding; 1.9A {Homo sapiens}
Probab=99.84 E-value=4.8e-21 Score=167.30 Aligned_cols=102 Identities=20% Similarity=0.279 Sum_probs=91.0
Q ss_pred CCCCCCCeeEEEEECC----EEEEeehhhhhccCHHHHHHHhccCCCCCccceEEecCCCCCHHHHHHHHHHHhCCCccc
Q 039661 1 LCTSGLPSDVTIEVGE----MSFHLHKFPLLSRSGLLEKLIEEFCSGDRSVCVLKLDGIPGGAKSFELVIKFCYGVKIEL 76 (597)
Q Consensus 1 ~~~~g~~~DV~I~Vg~----~~F~lHK~vLas~S~yfr~lf~~~~~e~~~~~~i~L~d~pGgae~felv~~FcYg~~i~i 76 (597)
+..++.+|||+|.|++ +.|++||.+|+++|+||++||.+...+ +. ..|.|++++ +++|+.+++|+||+++.+
T Consensus 2 l~~~~~~~Dv~l~v~~~~~~~~~~~Hk~iLa~~S~~F~~~f~~~~~e-~~-~~i~l~~~~--~~~f~~~l~~iYt~~~~~ 77 (109)
T 2vkp_A 2 MFNNELMADVHFVVGPPGATRTVPAHKYVLAVGSSVFYAMFYGDLAE-VK-SEIHIPDVE--PAAFLILLKYMYSDEIDL 77 (109)
T ss_dssp CTTCCTTCCEEEEESSTTSCEEEEECHHHHHHHCHHHHHHHC-------C-CEEEETTSC--HHHHHHHHHHHHHCCCCC
T ss_pred cccCCCcccEEEEECCCCCcEEEEeeHHHHHHcCHHHHHHhcCCccc-CC-CeEEeCCCC--HHHHHHHHHHHcCCCccC
Confidence 4578999999999988 999999999999999999999987766 34 789999994 799999999999999999
Q ss_pred chhhHhHHHHhhcccccCccCCCCcHHHHHHHHHHH
Q 039661 77 TALNAVGLRCAAEYLHMTDDYGEGNLITQTEAFLND 112 (597)
Q Consensus 77 t~~NV~~L~cAA~~LqMte~~~~~NL~~~ce~FL~~ 112 (597)
+++|+..|+.+|++++|++ |.+.|+.||.+
T Consensus 78 ~~~~~~~ll~~A~~~~~~~------L~~~c~~~l~~ 107 (109)
T 2vkp_A 78 EADTVLATLYAAKKYIVPA------LAKACVNFLET 107 (109)
T ss_dssp CTTTHHHHHHHHHHTTCHH------HHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHhCcHH------HHHHHHHHHHh
Confidence 9999999999999999998 99999999986
No 4
>3htm_A Speckle-type POZ protein; BTB, SPOP, ubiquitin, ligase, nucleus, UBL conjugation pathway, protein binding; 2.50A {Homo sapiens}
Probab=99.84 E-value=9.2e-21 Score=177.61 Aligned_cols=128 Identities=19% Similarity=0.202 Sum_probs=112.3
Q ss_pred CCCCCeeEEEEECCEEEEeehhhhhccCHHHHHHHhccCCCCCccceEEecCCCCCHHHHHHHHHHHhCCCcccchhhHh
Q 039661 3 TSGLPSDVTIEVGEMSFHLHKFPLLSRSGLLEKLIEEFCSGDRSVCVLKLDGIPGGAKSFELVIKFCYGVKIELTALNAV 82 (597)
Q Consensus 3 ~~g~~~DV~I~Vg~~~F~lHK~vLas~S~yfr~lf~~~~~e~~~~~~i~L~d~pGgae~felv~~FcYg~~i~it~~NV~ 82 (597)
.++.+|||+|.|||+.|++||.+|+++|+||++||.+...+ +....|.|++++ +++|+.+++|+|++++.++.+|+.
T Consensus 30 ~~~~~~Dv~l~v~~~~~~~Hk~iL~~~S~~F~~~f~~~~~e-~~~~~i~l~~~~--~~~f~~~l~~~Yt~~~~~~~~~~~ 106 (172)
T 3htm_A 30 ENSRFTDCCLCVAGQEFQAHKAILAARSPVFSAMFEHEMEE-SKKNRVEINDVE--PEVFKEMMCFIYTGKAPNLDKMAD 106 (172)
T ss_dssp HHTCSCCEEEEETTEEEEECHHHHHHHCHHHHHHHHSCCCG-GGTTEEEECSSC--HHHHHHHHHHHHHSCCTTGGGTHH
T ss_pred hCCCCcceEEEECCEEEEeeHHHHHHcCHHHHHHHccCccc-cCCCeEEecCCC--HHHHHHHHHHHhCCCCCCcHHHHH
Confidence 45789999999999999999999999999999999987665 456799999995 799999999999999999999999
Q ss_pred HHHHhhcccccCccCCCCcHHHHHHHHHHH-hhhchhHHHHHHhhhhhHHHHhhhhc---hhhhHHHHHH
Q 039661 83 GLRCAAEYLHMTDDYGEGNLITQTEAFLND-VFSDWADAIKALETCQQVLPYAQDLH---VVSRCIDSLA 148 (597)
Q Consensus 83 ~L~cAA~~LqMte~~~~~NL~~~ce~FL~~-vl~sw~dsi~~L~sC~~Llp~Ae~l~---iv~RCidsLA 148 (597)
.|+.+|++|+|++ |.+.|+.||.+ +- ..+|..++.+|+.++ +...|++-|+
T Consensus 107 ~ll~~A~~~~~~~------l~~~c~~~l~~~l~---------~~n~~~~~~~A~~~~~~~L~~~~~~~i~ 161 (172)
T 3htm_A 107 DLLAAADKYALER------LKVMCEDALCSNLS---------VENAAEILILADLHSADQLKTQAVDFIN 161 (172)
T ss_dssp HHHHHHHHTTCHH------HHHHHHHHHHHTCC---------TTTHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHhCcHH------HHHHHHHHHHHhCC---------HHHHHHHHHHHHHhCcHHHHHHHHHHHH
Confidence 9999999999998 99999999999 62 468888888998887 3444444443
No 5
>2if5_A Zinc finger and BTB domain-containing protein 7A; POZ domain, POK, proto oncogene, transcription F transcription; 2.00A {Homo sapiens} PDB: 2nn2_A
Probab=99.83 E-value=1.2e-20 Score=168.03 Aligned_cols=100 Identities=23% Similarity=0.304 Sum_probs=90.1
Q ss_pred CCCCCeeEEEEECCEEEEeehhhhhccCHHHHHHHhccCCCCCccceEEecCCCCCHHHHHHHHHHHhCCCcccchhhHh
Q 039661 3 TSGLPSDVTIEVGEMSFHLHKFPLLSRSGLLEKLIEEFCSGDRSVCVLKLDGIPGGAKSFELVIKFCYGVKIELTALNAV 82 (597)
Q Consensus 3 ~~g~~~DV~I~Vg~~~F~lHK~vLas~S~yfr~lf~~~~~e~~~~~~i~L~d~pGgae~felv~~FcYg~~i~it~~NV~ 82 (597)
.+|.+|||+|.|||++|++||.+|+++|+||++||.+...+ +....|.|++++ +++|+.+++|+|+|++.++.+|+.
T Consensus 21 ~~~~~~Dv~l~v~~~~~~aHk~vLaa~S~~F~~~f~~~~~e-~~~~~i~l~~~~--~~~f~~ll~~~Yt~~~~~~~~~~~ 97 (120)
T 2if5_A 21 TQGLLCDVVILVEGREFPTHRSVLAACSQYFKKLFTSGAVV-DQQNVYEIDFVS--AEALTALMDFAYTATLTVSTANVG 97 (120)
T ss_dssp HTTCSCCEEEEETTEEEEECHHHHHHHCHHHHHHHHC------CCSEEECCSSC--HHHHHHHHHHHHHSCCCCCGGGHH
T ss_pred hcCCCCCeEEEECCEEEeHHHHHHHHhCHHHHHHhcCCccc-cCCceEEeCCCC--HHHHHHHHHHHcCCCCccCHHHHH
Confidence 46899999999999999999999999999999999987665 456789999985 799999999999999999999999
Q ss_pred HHHHhhcccccCccCCCCcHHHHHHHHHH
Q 039661 83 GLRCAAEYLHMTDDYGEGNLITQTEAFLN 111 (597)
Q Consensus 83 ~L~cAA~~LqMte~~~~~NL~~~ce~FL~ 111 (597)
.|+.||++|+|++ |.+.|++||+
T Consensus 98 ~ll~~A~~~~i~~------L~~~C~~~L~ 120 (120)
T 2if5_A 98 DILSAARLLEIPA------VSHVCADLLD 120 (120)
T ss_dssp HHHHHHHHTTCHH------HHHHHHHHHC
T ss_pred HHHHHHHHhCCHH------HHHHHHHHhC
Confidence 9999999999999 9999999984
No 6
>4eoz_A Speckle-type POZ protein; E3 ubiquitin ligase, nucleus, protein binding; 2.40A {Homo sapiens}
Probab=99.82 E-value=3.9e-21 Score=175.34 Aligned_cols=119 Identities=19% Similarity=0.197 Sum_probs=91.0
Q ss_pred CCCCCeeEEEEECCEEEEeehhhhhccCHHHHHHHhccCCCCCccceEEecCCCCCHHHHHHHHHHHhCCCcccchhhHh
Q 039661 3 TSGLPSDVTIEVGEMSFHLHKFPLLSRSGLLEKLIEEFCSGDRSVCVLKLDGIPGGAKSFELVIKFCYGVKIELTALNAV 82 (597)
Q Consensus 3 ~~g~~~DV~I~Vg~~~F~lHK~vLas~S~yfr~lf~~~~~e~~~~~~i~L~d~pGgae~felv~~FcYg~~i~it~~NV~ 82 (597)
.++.+|||+|.|||+.|++||.+|+++|+||++||.+...+ +....|.|++++ +++|+.+++|+||+++.++.+|+.
T Consensus 21 ~~~~~~Dv~l~v~~~~~~~Hk~iL~~~S~~F~~~f~~~~~e-~~~~~i~l~~~~--~~~~~~~l~~~Y~~~~~~~~~~~~ 97 (145)
T 4eoz_A 21 ENSRFTDCCLCVAGQEFQAHKAILAARSPVFSAMFEHEMEE-SKKNRVEINDVE--PEVFKEMMCFIYTGKAPNLDKMAD 97 (145)
T ss_dssp HHTCSCCEEEEETTEEEEECHHHHHHHCHHHHHHHHSSSHH-HHHTEEEECSSC--HHHHHHHHHHHHHSCCTTGGGTHH
T ss_pred hCCCCcceEEEECCEEEEeehHHHHHcCHHHHHHHcCCCcC-CCCceEEecCCC--HHHHHHHHHhhccCccCCcHHHHH
Confidence 35789999999999999999999999999999999986654 345789999994 799999999999999999999999
Q ss_pred HHHHhhcccccCccCCCCcHHHHHHHHHHH-hhhchhHHHHHHhhhhhHHHHhhhhch
Q 039661 83 GLRCAAEYLHMTDDYGEGNLITQTEAFLND-VFSDWADAIKALETCQQVLPYAQDLHV 139 (597)
Q Consensus 83 ~L~cAA~~LqMte~~~~~NL~~~ce~FL~~-vl~sw~dsi~~L~sC~~Llp~Ae~l~i 139 (597)
.|+.+|++|+|++ |...|+.||.+ + ...+|..++.+|+.+++
T Consensus 98 ~ll~~A~~~~~~~------l~~~c~~~l~~~l---------~~~n~~~~l~~A~~~~~ 140 (145)
T 4eoz_A 98 DLLAAADKYALER------LKVMCEDALCSNL---------SVENAAEILILADLHSA 140 (145)
T ss_dssp HHHHHHHHTTCHH------HHHHHHCC-------------------------------
T ss_pred HHHHHHHHhCHHH------HHHHHHHHHHHhC---------CHHHHHHHHHHHHHhCH
Confidence 9999999999998 99999999999 6 35789999999998875
No 7
>1r29_A B-cell lymphoma 6 protein; BTB domain, transcriptional repression, transcription; 1.30A {Homo sapiens} SCOP: d.42.1.1 PDB: 1r28_A 1r2b_A 3bim_A 3lbz_A* 3e4u_A
Probab=99.82 E-value=1.5e-20 Score=169.18 Aligned_cols=100 Identities=24% Similarity=0.456 Sum_probs=93.3
Q ss_pred CCCCCeeEEEEECCEEEEeehhhhhccCHHHHHHHhccCCCCCccceEEe-cCCCCCHHHHHHHHHHHhCCCcccchhhH
Q 039661 3 TSGLPSDVTIEVGEMSFHLHKFPLLSRSGLLEKLIEEFCSGDRSVCVLKL-DGIPGGAKSFELVIKFCYGVKIELTALNA 81 (597)
Q Consensus 3 ~~g~~~DV~I~Vg~~~F~lHK~vLas~S~yfr~lf~~~~~e~~~~~~i~L-~d~pGgae~felv~~FcYg~~i~it~~NV 81 (597)
.++.+|||+|.|+|++|++||.+|+++|+||++||.+...+ ....|.| ++++ +++|+.+++|+|++++.++.+|+
T Consensus 25 ~~~~~~Dv~l~v~~~~~~aHk~iLaa~S~~F~~~f~~~~~e--~~~~i~l~~~~~--~~~f~~ll~~~Ytg~~~~~~~~~ 100 (127)
T 1r29_A 25 SRDILTDVVIVVSREQFRAHKTVLMACSGLFYSIFTDQLKR--NLSVINLDPEIN--PEGFNILLDFMYTSRLNLREGNI 100 (127)
T ss_dssp HTTCSCCEEEEETTEEEEECHHHHHHHCHHHHHHHTSTTTT--TCSEEECCTTSC--HHHHHHHHHHHHHSCCCCCTTTH
T ss_pred hcCCCCCEEEEECCEEEehHHHHHHHhCHHHHHHhcCCccC--CCCEEEeCCCCC--HHHHHHHHHHHcCCCcCcCHHHH
Confidence 47899999999999999999999999999999999987664 3578999 8985 79999999999999999999999
Q ss_pred hHHHHhhcccccCccCCCCcHHHHHHHHHHH
Q 039661 82 VGLRCAAEYLHMTDDYGEGNLITQTEAFLND 112 (597)
Q Consensus 82 ~~L~cAA~~LqMte~~~~~NL~~~ce~FL~~ 112 (597)
..|+.||++|+|++ |.+.|+.||.+
T Consensus 101 ~~ll~~A~~~~i~~------L~~~c~~~l~~ 125 (127)
T 1r29_A 101 MAVMATAMYLQMEH------VVDTCRKFIKA 125 (127)
T ss_dssp HHHHHHHHHTTCHH------HHHHHHHHHHT
T ss_pred HHHHHHHHHhCCHH------HHHHHHHHHHh
Confidence 99999999999998 99999999974
No 8
>3b84_A Zinc finger and BTB domain-containing protein 48; krueppel related zinc finger protein 3, HKR3, ZBTB48, Z finger, oncogene; 1.74A {Homo sapiens}
Probab=99.82 E-value=5.9e-21 Score=170.58 Aligned_cols=97 Identities=24% Similarity=0.263 Sum_probs=89.3
Q ss_pred CCCCCeeEEEEECCEEEEeehhhhhccCHHHHHHHhccCCCCCccceEEecCCCCCHHHHHHHHHHHhCCCcccchhhHh
Q 039661 3 TSGLPSDVTIEVGEMSFHLHKFPLLSRSGLLEKLIEEFCSGDRSVCVLKLDGIPGGAKSFELVIKFCYGVKIELTALNAV 82 (597)
Q Consensus 3 ~~g~~~DV~I~Vg~~~F~lHK~vLas~S~yfr~lf~~~~~e~~~~~~i~L~d~pGgae~felv~~FcYg~~i~it~~NV~ 82 (597)
.+|.+|||+|.|||++|++||.+|+++|+||++||.++. ...|.|++++ +++|+.+++|+|||++.++.+|+.
T Consensus 20 ~~~~~~Dv~l~v~~~~f~aHk~vLaa~S~yF~~~f~~~~-----~~~i~l~~~~--~~~f~~ll~~iYtg~~~~~~~~v~ 92 (119)
T 3b84_A 20 EKGQYCDATLDVGGLVFKAHWSVLACCSHFFQSLYGDGS-----GGSVVLPAGF--AEIFGLLLDFFYTGHLALTSGNRD 92 (119)
T ss_dssp HHTCSCCEEEEETTEEEEECHHHHHHHCHHHHHHHTTTT-----CCCEEECGGG--HHHHHHHHHHHHHSCCCCCTTTHH
T ss_pred hcCCCcceEEEECCEEEEeeHHHHhhcCHHHHHHHCCCC-----CCeEEeCCCC--HHHHHHHHHHHcCCCCccCHHHHH
Confidence 468899999999999999999999999999999998755 2579999985 799999999999999999999999
Q ss_pred HHHHhhcccccCccCCCCcHHHHHHHHHHH
Q 039661 83 GLRCAAEYLHMTDDYGEGNLITQTEAFLND 112 (597)
Q Consensus 83 ~L~cAA~~LqMte~~~~~NL~~~ce~FL~~ 112 (597)
.|+.||++|+|++ |.+.|++||.+
T Consensus 93 ~ll~~A~~~~i~~------L~~~C~~~l~~ 116 (119)
T 3b84_A 93 QVLLAARELRVPE------AVELCQSFKPK 116 (119)
T ss_dssp HHHHHHHHTTCHH------HHHHHHHCC--
T ss_pred HHHHHHHHhCcHH------HHHHHHHHHHH
Confidence 9999999999998 99999999976
No 9
>2ppi_A Gigaxonin; BTB domain, protein degradation, structural genomics, struct genomics consortium, SGC, structural protein; 2.40A {Homo sapiens}
Probab=99.81 E-value=2.2e-20 Score=172.93 Aligned_cols=103 Identities=19% Similarity=0.217 Sum_probs=90.1
Q ss_pred CCCCCCCeeEEEEECCEEEEeehhhhhccCHHHHHHHhccCCC-CCccceEEecCCCCCHHHHHHHHHHHhCCCcccchh
Q 039661 1 LCTSGLPSDVTIEVGEMSFHLHKFPLLSRSGLLEKLIEEFCSG-DRSVCVLKLDGIPGGAKSFELVIKFCYGVKIELTAL 79 (597)
Q Consensus 1 ~~~~g~~~DV~I~Vg~~~F~lHK~vLas~S~yfr~lf~~~~~e-~~~~~~i~L~d~pGgae~felv~~FcYg~~i~it~~ 79 (597)
+..++.+|||+|.|+|+.|++||.+|+++|+||++||.....+ ++....|.|++++ +++|+.+++|+|+|++.++.+
T Consensus 41 l~~~~~~~Dv~l~v~~~~f~aHk~vLaa~S~yF~~mf~~~~~e~e~~~~~I~l~~v~--~~~f~~lL~fiYtg~~~i~~~ 118 (144)
T 2ppi_A 41 FREESRFCDAHLVLDGEEIPVQKNILAAASPYIRTKLNYNPPKDDGSTYKIELEGIS--VMVMREILDYIFSGQIRLNED 118 (144)
T ss_dssp TTC--CCCCEEEEETTEEEEECHHHHHHHCHHHHHHHHHCC-----CCCEEECCSSC--HHHHHHHHHHHTTSCCCCCTT
T ss_pred HHhcCCCcceEEEECCEEEehHHHHHHHcCHHHHHHHcCCCccccCCCcEEEeCCCC--HHHHHHHHHHHhCCCCCCCHH
Confidence 3568999999999999999999999999999999999986543 1245689999995 799999999999999999999
Q ss_pred hHhHHHHhhcccccCccCCCCcHHHHHHHHHH
Q 039661 80 NAVGLRCAAEYLHMTDDYGEGNLITQTEAFLN 111 (597)
Q Consensus 80 NV~~L~cAA~~LqMte~~~~~NL~~~ce~FL~ 111 (597)
||..|+.||++|+|++ |.+.|++||.
T Consensus 119 ~v~~ll~~A~~l~i~~------L~~~C~~~L~ 144 (144)
T 2ppi_A 119 TIQDVVQAADLLLLTD------LKTLCCEFLE 144 (144)
T ss_dssp THHHHHHHHHHTTCHH------HHHHHHTTC-
T ss_pred HHHHHHHHHHHhCcHH------HHHHHHHHhC
Confidence 9999999999999998 9999999974
No 10
>2z8h_A Transcription regulator protein BACH1; BTB, POZ, disulfide bond, activator, DNA-binding, nucleus, phosphorylation, repressor; 2.50A {Mus musculus}
Probab=99.81 E-value=1.6e-20 Score=171.88 Aligned_cols=101 Identities=23% Similarity=0.289 Sum_probs=92.9
Q ss_pred CCCCCeeEEEEECCEEEEeehhhhhccCHHHHHHHhccCCCCCccceEEec-CCCCCHHHHHHHHHHHhCCCcccchhhH
Q 039661 3 TSGLPSDVTIEVGEMSFHLHKFPLLSRSGLLEKLIEEFCSGDRSVCVLKLD-GIPGGAKSFELVIKFCYGVKIELTALNA 81 (597)
Q Consensus 3 ~~g~~~DV~I~Vg~~~F~lHK~vLas~S~yfr~lf~~~~~e~~~~~~i~L~-d~pGgae~felv~~FcYg~~i~it~~NV 81 (597)
.+|.+|||+|.|||+.|++||.+|+++|+||++||.+.+.+ ...|.|+ +++ +++|+.+++|+|||++.++.+||
T Consensus 32 ~~~~~~Dv~l~v~~~~f~aHk~vLaa~S~yF~~~f~~~~~e---~~~i~l~~~v~--~~~~~~lL~~~Ytg~~~i~~~~v 106 (138)
T 2z8h_A 32 KKDVLCDVTVLVEGQRFRAHRSVLAACSSYFHSRIVGQTDA---ELTVTLPEEVT--VKGFEPLIQFAYTAKLILSKDNV 106 (138)
T ss_dssp HHTCSCCEEEEETTEEEEECHHHHHHHCHHHHHHHTTCCCT---TEEEECCTTSC--HHHHHHHHHHHHHSCCCCCTTTH
T ss_pred hhCCCcCeEEEECCEEEechHHHHHHcCHHHHHHHhcCCCC---CceEEeCCCCC--HHHHHHHHHHhcCCCcccCHHHH
Confidence 46889999999999999999999999999999999987654 3578885 884 79999999999999999999999
Q ss_pred hHHHHhhcccccCccCCCCcHHHHHHHHHHH-hh
Q 039661 82 VGLRCAAEYLHMTDDYGEGNLITQTEAFLND-VF 114 (597)
Q Consensus 82 ~~L~cAA~~LqMte~~~~~NL~~~ce~FL~~-vl 114 (597)
..|+.||++|||++ |.+.|+.||.+ +.
T Consensus 107 ~~ll~~A~~~~i~~------L~~~C~~~l~~~l~ 134 (138)
T 2z8h_A 107 DEVCRCVEFLSVHN------IEESCFQFLKFKFL 134 (138)
T ss_dssp HHHHHHHHHHTCGG------GHHHHHHHTTCCCS
T ss_pred HHHHHHHHHhCCHH------HHHHHHHHHHHhcc
Confidence 99999999999998 99999999988 53
No 11
>2vpk_A Myoneurin; transcription regulation, transcription, metal-binding, alternative splicing, zinc, nucleus, BTB domain, zinc-finger, DNA-binding; 2.00A {Homo sapiens}
Probab=99.81 E-value=1.6e-20 Score=166.35 Aligned_cols=97 Identities=26% Similarity=0.424 Sum_probs=88.4
Q ss_pred CCCCCeeEEEEECCEEEEeehhhhhccCHHHHHHHhccCCCCCccceEEec--CCCCCHHHHHHHHHHHhCCCcccchhh
Q 039661 3 TSGLPSDVTIEVGEMSFHLHKFPLLSRSGLLEKLIEEFCSGDRSVCVLKLD--GIPGGAKSFELVIKFCYGVKIELTALN 80 (597)
Q Consensus 3 ~~g~~~DV~I~Vg~~~F~lHK~vLas~S~yfr~lf~~~~~e~~~~~~i~L~--d~pGgae~felv~~FcYg~~i~it~~N 80 (597)
.+|.+|||+|.|||+.|++||.+|+++|+||++||.+.. ...|.|+ +++ +++|+.+++|+|||++.++.+|
T Consensus 18 ~~~~~~Dv~l~v~~~~~~aHk~vLaa~S~yF~~~f~~~~-----~~~i~l~~~~~~--~~~f~~ll~~~Yt~~~~~~~~~ 90 (116)
T 2vpk_A 18 EAGFLCDCTIVIGEFQFKAHRNVLASFSEYFGAIYRSTS-----ENNVFLDQSQVK--ADGFQKLLEFIYTGTLNLDSWN 90 (116)
T ss_dssp HHTCSCCEEEEETTEEEEECHHHHHHHCHHHHHHHTTCC-----CSCEECCTTTCC--HHHHHHHHHHHHHSCCCCCTTT
T ss_pred hcCCCCcEEEEECCEEEeccHHHHhhcCHHHHHHHcCCC-----CCeEEeecCCCC--HHHHHHHHHHHcCCCcccCHHH
Confidence 468899999999999999999999999999999998752 2467777 884 7999999999999999999999
Q ss_pred HhHHHHhhcccccCccCCCCcHHHHHHHHHHH
Q 039661 81 AVGLRCAAEYLHMTDDYGEGNLITQTEAFLND 112 (597)
Q Consensus 81 V~~L~cAA~~LqMte~~~~~NL~~~ce~FL~~ 112 (597)
|..|+.||++|+|++ |.+.|++||.+
T Consensus 91 v~~ll~~A~~~~i~~------L~~~C~~~l~~ 116 (116)
T 2vpk_A 91 VKEIHQAADYLKVEE------VVTKCKIKMED 116 (116)
T ss_dssp HHHHHHHHHHTTCHH------HHHHHHHHHC-
T ss_pred HHHHHHHHHHhCCHH------HHHHHHHHHhC
Confidence 999999999999998 99999999853
No 12
>1buo_A POZ domain, protein (promyelocytic leukemia zinc finger prote; protein-protein interaction domain, transcriptional represso finger protein; 1.90A {Homo sapiens} SCOP: d.42.1.1 PDB: 1cs3_A
Probab=99.81 E-value=2e-20 Score=167.36 Aligned_cols=96 Identities=27% Similarity=0.346 Sum_probs=90.0
Q ss_pred CCCCCeeEEEEECCEEEEeehhhhhccCHHHHHHHhccCCCCCccceEEecCCCCCHHHHHHHHHHHhCCCcccchhhHh
Q 039661 3 TSGLPSDVTIEVGEMSFHLHKFPLLSRSGLLEKLIEEFCSGDRSVCVLKLDGIPGGAKSFELVIKFCYGVKIELTALNAV 82 (597)
Q Consensus 3 ~~g~~~DV~I~Vg~~~F~lHK~vLas~S~yfr~lf~~~~~e~~~~~~i~L~d~pGgae~felv~~FcYg~~i~it~~NV~ 82 (597)
.+|.+|||+|.|||++|++||.+|+++|+||++||.++ ..+|.|++++ +++|+.+++|+|||++.++++|+.
T Consensus 24 ~~~~~~Dv~l~v~~~~f~aHk~vLaa~S~yF~~~f~~~------~~~i~l~~~~--~~~f~~ll~~~Ytg~~~~~~~~~~ 95 (121)
T 1buo_A 24 LAGTLCDVVIMVDSQEFHAHRTVLACTSKMFEILFHRN------SQHYTLDFLS--PKTFQQILEYAYTATLQAKAEDLD 95 (121)
T ss_dssp HHTTTCCEEEEESSCEEEECHHHHHHHCHHHHHHTTSC------CSEEEECSSC--HHHHHHHHHHHHHSCCCCCGGGHH
T ss_pred hcCCCCCEEEEECCEEEehhHHHHhhcCHHHHHHHcCC------CcEEEeCCCC--HHHHHHHHHhhcCCCcCCCHHHHH
Confidence 46889999999999999999999999999999999853 2579999995 799999999999999999999999
Q ss_pred HHHHhhcccccCccCCCCcHHHHHHHHHHH
Q 039661 83 GLRCAAEYLHMTDDYGEGNLITQTEAFLND 112 (597)
Q Consensus 83 ~L~cAA~~LqMte~~~~~NL~~~ce~FL~~ 112 (597)
.|+.||++|+|++ |.+.|++||.+
T Consensus 96 ~ll~~A~~~~i~~------L~~~c~~~l~~ 119 (121)
T 1buo_A 96 DLLYAAEILEIEY------LEEQCLKMLET 119 (121)
T ss_dssp HHHHHHHHHTCHH------HHHHHHHHHHH
T ss_pred HHHHHHHHHCCHH------HHHHHHHHHHH
Confidence 9999999999998 99999999986
No 13
>3ohu_A Transcription regulator protein BACH2; BTB/POZ domain; 2.10A {Homo sapiens} SCOP: d.42.1.0 PDB: 3ohv_A
Probab=99.80 E-value=9.5e-21 Score=170.02 Aligned_cols=97 Identities=25% Similarity=0.323 Sum_probs=89.3
Q ss_pred CCCCCeeEEEEECCEEEEeehhhhhccCHHHHHHHhccCCCCCccceEEecC-CCCCHHHHHHHHHHHhCCCcccchhhH
Q 039661 3 TSGLPSDVTIEVGEMSFHLHKFPLLSRSGLLEKLIEEFCSGDRSVCVLKLDG-IPGGAKSFELVIKFCYGVKIELTALNA 81 (597)
Q Consensus 3 ~~g~~~DV~I~Vg~~~F~lHK~vLas~S~yfr~lf~~~~~e~~~~~~i~L~d-~pGgae~felv~~FcYg~~i~it~~NV 81 (597)
.++.+|||+|.|||+.|++||.+|+++|+||++||.....+ ...|.+++ ++ +++|+.+++|+|+|++.++.+||
T Consensus 28 ~~~~~~Dv~l~v~~~~f~aHk~vLaa~S~yF~~~f~~~~~e---~~~i~l~~~~~--~~~f~~~l~~iYtg~~~~~~~~v 102 (125)
T 3ohu_A 28 KKDILCDVTLIVERKEFRAHRAVLAACSEYFWQALVGQTKN---DLVVSLPEEVT--ARGFGPLLQFAYTAKLLLSRENI 102 (125)
T ss_dssp HHTCSCCEEEEETTEEEEECHHHHHHHBHHHHHHHTTCCCS---SCEEECCTTCC--HHHHHHHHHHHTTSEEEECTTTH
T ss_pred hcCCccceEEEECCEEEechHHHHHHcCHHHHHHhcCCCCC---CcEEEeCCCCC--HHHHHHHHHhHcCCceEECHHHH
Confidence 46889999999999999999999999999999999987654 46899988 84 79999999999999999999999
Q ss_pred hHHHHhhcccccCccCCCCcHHHHHHHHH
Q 039661 82 VGLRCAAEYLHMTDDYGEGNLITQTEAFL 110 (597)
Q Consensus 82 ~~L~cAA~~LqMte~~~~~NL~~~ce~FL 110 (597)
..|+.||++|+|++ |.+.|++||
T Consensus 103 ~~ll~~A~~l~i~~------L~~~C~~~L 125 (125)
T 3ohu_A 103 REVIRCAEFLRMHN------LEDSCFSFL 125 (125)
T ss_dssp HHHHHHHHHHTBSS------CTTSSCCCC
T ss_pred HHHHHHHHHhCCHH------HHHHHHHhC
Confidence 99999999999998 988888775
No 14
>3ga1_A Nucleus accumbens-associated protein 1; BTB/POZ domain, phosphoprotein, repressor, transcri transcription regulation; 2.10A {Homo sapiens}
Probab=99.80 E-value=2.2e-20 Score=168.91 Aligned_cols=97 Identities=22% Similarity=0.431 Sum_probs=84.3
Q ss_pred CCCCCeeEEEEECCEEEEeehhhhhccCHHHHHHHhccCCCCCccceEEec-CCCCCHHHHHHHHHHHhCCCcccchhhH
Q 039661 3 TSGLPSDVTIEVGEMSFHLHKFPLLSRSGLLEKLIEEFCSGDRSVCVLKLD-GIPGGAKSFELVIKFCYGVKIELTALNA 81 (597)
Q Consensus 3 ~~g~~~DV~I~Vg~~~F~lHK~vLas~S~yfr~lf~~~~~e~~~~~~i~L~-d~pGgae~felv~~FcYg~~i~it~~NV 81 (597)
.++.+|||+|.|||+.|++||.+|+++|+||++||... . ...|.|+ +++ +++|+.+++|+|+|++.++.+|+
T Consensus 29 ~~~~~~Dv~l~v~~~~~~~Hk~vLaa~S~~F~~~f~~~-~----~~~i~l~~~~~--~~~f~~ll~~iYtg~~~i~~~~~ 101 (129)
T 3ga1_A 29 LQGLYCDVSVVVKGHAFKAHRAVLAASSSYFRDLFNNS-R----SAVVELPAAVQ--PQSFQQILSFCYTGRLSMNVGDQ 101 (129)
T ss_dssp HTTCSCCEEEEETTEEEEECHHHHHHHBHHHHHHHHHC-C----CSEEECCTTCC--HHHHHHHHHHHHHSEEECCTTTH
T ss_pred hcCCCcceEEEECCEEEEehHHHHHHcCHHHHHHHcCC-C----CCEEEECCCCC--HHHHHHHHHHHhCCccccCHHHH
Confidence 46889999999999999999999999999999999976 2 3689996 885 79999999999999999999999
Q ss_pred hHHHHhhcccccCccCCCCcHHHHHHHHHHH
Q 039661 82 VGLRCAAEYLHMTDDYGEGNLITQTEAFLND 112 (597)
Q Consensus 82 ~~L~cAA~~LqMte~~~~~NL~~~ce~FL~~ 112 (597)
..|+.||++|||++ |.+.|++||.+
T Consensus 102 ~~ll~~A~~~~i~~------l~~~C~~~L~~ 126 (129)
T 3ga1_A 102 DLLMYTAGFLQIQE------IMEKGTEFFLK 126 (129)
T ss_dssp HHHHHHHHHTTBTT------SSCC-------
T ss_pred HHHHHHHHHhCCHH------HHHHHHHHHHH
Confidence 99999999999999 99999999986
No 15
>2q81_A MIZ-1 protein; BTB/POZ domain, transcription; HET: PG4; 2.10A {Homo sapiens} PDB: 3m52_A
Probab=99.80 E-value=2.4e-20 Score=166.66 Aligned_cols=95 Identities=29% Similarity=0.371 Sum_probs=87.6
Q ss_pred CCCCCeeEEEEECCEEEEeehhhhhccCHHHHHHHhccCCCCCccceEEecCCCCCHHHHHHHHHHHhCCCcccchhhHh
Q 039661 3 TSGLPSDVTIEVGEMSFHLHKFPLLSRSGLLEKLIEEFCSGDRSVCVLKLDGIPGGAKSFELVIKFCYGVKIELTALNAV 82 (597)
Q Consensus 3 ~~g~~~DV~I~Vg~~~F~lHK~vLas~S~yfr~lf~~~~~e~~~~~~i~L~d~pGgae~felv~~FcYg~~i~it~~NV~ 82 (597)
.+|.+|||+|.|||+.|++||.+|+++|+||++||.+.. ..|.|+++ .+++|+.+++|+|||++.++.+|+.
T Consensus 23 ~~~~~~Dv~l~v~~~~~~aHk~vLaa~S~yF~~~f~~~~------~~i~l~~~--~~~~f~~ll~~~Ytg~~~i~~~~~~ 94 (119)
T 2q81_A 23 QLGLLCDCTFVVDGVHFKAHKAVLAACSEYFKMLFVDQK------DVVHLDIS--NAAGLGQVLEFMYTAKLSLSPENVD 94 (119)
T ss_dssp HHTCSCCEEEEETTEEEEECHHHHHHHCHHHHHHHHHCC------SGGGGGGC--CHHHHHHHHHHHHHSCCCCCTTTHH
T ss_pred hcCCCcceEEEECCEEEehhHHHHHHcCHHHHHHHcCCC------CEEEeCCC--CHHHHHHHHHHHcCCCCccCHHHHH
Confidence 468899999999999999999999999999999998632 35777887 4799999999999999999999999
Q ss_pred HHHHhhcccccCccCCCCcHHHHHHHHHH
Q 039661 83 GLRCAAEYLHMTDDYGEGNLITQTEAFLN 111 (597)
Q Consensus 83 ~L~cAA~~LqMte~~~~~NL~~~ce~FL~ 111 (597)
.|+.||++|+|++ |.+.|++||.
T Consensus 95 ~ll~~A~~l~i~~------L~~~C~~~l~ 117 (119)
T 2q81_A 95 DVLAVATFLQMQD------IITACHALKS 117 (119)
T ss_dssp HHHHHHHHTTCHH------HHHHHHHHHT
T ss_pred HHHHHHHHhCCHH------HHHHHHHHHh
Confidence 9999999999998 9999999984
No 16
>2yy9_A Zinc finger and BTB domain-containing protein 48; mouse, HKR3, structural genomics, NPPSFA; 2.60A {Mus musculus}
Probab=99.80 E-value=1.5e-20 Score=171.85 Aligned_cols=98 Identities=22% Similarity=0.261 Sum_probs=88.5
Q ss_pred CCCCCCeeEEEEECCEEEEeehhhhhccCHHHHHHHhccCCCCCccceEEecCCCCCHHHHHHHHHHHhCCCcccchhhH
Q 039661 2 CTSGLPSDVTIEVGEMSFHLHKFPLLSRSGLLEKLIEEFCSGDRSVCVLKLDGIPGGAKSFELVIKFCYGVKIELTALNA 81 (597)
Q Consensus 2 ~~~g~~~DV~I~Vg~~~F~lHK~vLas~S~yfr~lf~~~~~e~~~~~~i~L~d~pGgae~felv~~FcYg~~i~it~~NV 81 (597)
+.++.+|||+|.|+|+.|++||.+|+++|+||++||.... ...|.|++++ +++|+.+++|+|++++.++.+||
T Consensus 20 ~~~~~~~Dv~l~v~~~~f~aHk~vLaa~S~yF~~mf~~~~-----~~~i~l~~~~--~~~f~~lL~fiYtg~~~i~~~~v 92 (135)
T 2yy9_A 20 REKGQYCDATLDVGGLVFKAHWSVLACCSHFFQRIYGDGT-----GGSVVLPAGF--AEIFGLLLDFFYTGHLALTSGNR 92 (135)
T ss_dssp HHTTTTCCEEEEETTEEEEECHHHHHHHCHHHHHTCC---------CCEEECGGG--HHHHHHHHHHHHHSCCCCCTTTH
T ss_pred HhcCCCcceEEEECCEEEehHHHHHHHhCHHHHHHHcCCC-----CCeEEeCCCC--HHHHHHHHHHHhCCCCCCCHHHH
Confidence 3578999999999999999999999999999999998755 2479999985 79999999999999999999999
Q ss_pred hHHHHhhcccccCccCCCCcHHHHHHHHHHH
Q 039661 82 VGLRCAAEYLHMTDDYGEGNLITQTEAFLND 112 (597)
Q Consensus 82 ~~L~cAA~~LqMte~~~~~NL~~~ce~FL~~ 112 (597)
..|+.||++|+|++ |++.|++||.+
T Consensus 93 ~~ll~~A~~l~i~~------L~~~C~~~l~~ 117 (135)
T 2yy9_A 93 DQVLLAAKELRVPE------AVELCQSFQPQ 117 (135)
T ss_dssp HHHHHHHHHTTCHH------HHHHHHHCCC-
T ss_pred HHHHHHHHHhCcHH------HHHHHHHHHHH
Confidence 99999999999998 99999999988
No 17
>2ihc_A Transcription regulator protein BACH1; BRIC-A-BRAC domain,transcription factor, protein-PROT interaction; 2.44A {Homo sapiens}
Probab=99.80 E-value=1.2e-20 Score=169.75 Aligned_cols=98 Identities=26% Similarity=0.323 Sum_probs=87.8
Q ss_pred CCCCCeeEEEEECCEEEEeehhhhhccCHHHHHHHhccCCCCCccceEEec-CCCCCHHHHHHHHHHHhCCCcccchhhH
Q 039661 3 TSGLPSDVTIEVGEMSFHLHKFPLLSRSGLLEKLIEEFCSGDRSVCVLKLD-GIPGGAKSFELVIKFCYGVKIELTALNA 81 (597)
Q Consensus 3 ~~g~~~DV~I~Vg~~~F~lHK~vLas~S~yfr~lf~~~~~e~~~~~~i~L~-d~pGgae~felv~~FcYg~~i~it~~NV 81 (597)
.+|.+|||+|.|||++|++||.+|+++|+||++||.+.+.+ ...|.++ ++ .+++|+.+++|+|||++.++.+||
T Consensus 25 ~~~~~~Dv~l~v~~~~~~aHk~vLaa~S~yF~~mf~~~~~e---~~~i~l~~~v--~~~~f~~lL~~iYtg~~~i~~~~v 99 (124)
T 2ihc_A 25 KKDVLCDVTIFVEGQRFRAHRSVLAACSSYFHSRIVGQADG---ELNITLPEEV--TVKGFEPLIQFAYTAKLILSKENV 99 (124)
T ss_dssp HHTCSCCEEEEETTEEEEECHHHHHHHBHHHHHHHTTC------CEEEECCTTS--CHHHHHHHHHHHHHSEEEEETTTH
T ss_pred hcCCCcCEEEEECCEEEecHHHHHHHcCHHHHHHHcCCCCC---CceEeecCCc--CHHHHHHHHHHhcCCCcccCHHHH
Confidence 46889999999999999999999999999999999987654 2578884 88 479999999999999999999999
Q ss_pred hHHHHhhcccccCccCCCCcHHHHHHHHHH
Q 039661 82 VGLRCAAEYLHMTDDYGEGNLITQTEAFLN 111 (597)
Q Consensus 82 ~~L~cAA~~LqMte~~~~~NL~~~ce~FL~ 111 (597)
..|+.||++|||++ |.+.|++||.
T Consensus 100 ~~ll~~A~~~~~~~------L~~~C~~~l~ 123 (124)
T 2ihc_A 100 DEVCKCVEFLSVHN------IEESCFQFLK 123 (124)
T ss_dssp HHHHHHHHHHTBSS------CCGGGGGTC-
T ss_pred HHHHHHHHHHCCHH------HHHHHHHHHh
Confidence 99999999999998 9999999874
No 18
>3m5b_A Zinc finger and BTB domain-containing protein 32; POZ domain, BTB/POZ domain, ZBTB32, zinc finger domain-containing protein 32; 2.00A {Homo sapiens} SCOP: d.42.1.0
Probab=99.77 E-value=1.7e-19 Score=162.25 Aligned_cols=92 Identities=25% Similarity=0.244 Sum_probs=83.8
Q ss_pred CCCCCeeEEEEECCEEEEeehhhhhccCHHHHHHHhccCCCCCccceEEecCCCCCHHHHHHHHHHHhCCCcccchhhHh
Q 039661 3 TSGLPSDVTIEVGEMSFHLHKFPLLSRSGLLEKLIEEFCSGDRSVCVLKLDGIPGGAKSFELVIKFCYGVKIELTALNAV 82 (597)
Q Consensus 3 ~~g~~~DV~I~Vg~~~F~lHK~vLas~S~yfr~lf~~~~~e~~~~~~i~L~d~pGgae~felv~~FcYg~~i~it~~NV~ 82 (597)
.+|.+|||+|.|||+.|++||.+|+++|+||++ ....|.|++++ +++|+.+++|+|||++.|+.+||.
T Consensus 26 ~~~~~~Dv~l~v~~~~f~aHk~vLaa~S~yF~~----------~~~~i~l~~v~--~~~f~~ll~fiYtg~~~i~~~~v~ 93 (119)
T 3m5b_A 26 LRPALCDTLITVGSQEFPAHSLVLAGVSQQLGR----------RGQWALGEGIS--PSTFAQLLNFVYGESVELQPGELR 93 (119)
T ss_dssp HTTTTCCEEEEETTEEEEECHHHHHTTCGGGCC----------CEEEECCSSCC--HHHHHHHHHHHTTCCEEECGGGHH
T ss_pred hcCCCcceEEEECCEEEeeEHHHHHHcCHHHhc----------CCCEEEeCCCC--HHHHHHHHHHHcCCCcCcCHHHHH
Confidence 468999999999999999999999999999974 12578999995 799999999999999999999999
Q ss_pred HHHHhhcccccCccCCCCcHHHHHHHHHHH
Q 039661 83 GLRCAAEYLHMTDDYGEGNLITQTEAFLND 112 (597)
Q Consensus 83 ~L~cAA~~LqMte~~~~~NL~~~ce~FL~~ 112 (597)
.|+.||++|||++ |.+.|++++.+
T Consensus 94 ~ll~aA~~l~i~~------l~~~C~~~~~~ 117 (119)
T 3m5b_A 94 PLQEAARALGVQS------LEEACWRARGD 117 (119)
T ss_dssp HHHHHHHHTTCHH------HHHHHHHHC--
T ss_pred HHHHHHHHhCCHH------HHHHHHHHHhh
Confidence 9999999999998 99999998764
No 19
>3hqi_A Speckle-type POZ protein; SPOP, ubiquitin, puckered, nucleus, UBL conjugation pathway, protein binding, ligase; 2.62A {Homo sapiens} PDB: 3hu6_A
Probab=99.76 E-value=1.2e-18 Score=178.83 Aligned_cols=129 Identities=19% Similarity=0.200 Sum_probs=111.5
Q ss_pred CCCCCeeEEEEECCEEEEeehhhhhccCHHHHHHHhccCCCCCccceEEecCCCCCHHHHHHHHHHHhCCCcccchhhHh
Q 039661 3 TSGLPSDVTIEVGEMSFHLHKFPLLSRSGLLEKLIEEFCSGDRSVCVLKLDGIPGGAKSFELVIKFCYGVKIELTALNAV 82 (597)
Q Consensus 3 ~~g~~~DV~I~Vg~~~F~lHK~vLas~S~yfr~lf~~~~~e~~~~~~i~L~d~pGgae~felv~~FcYg~~i~it~~NV~ 82 (597)
.++.+|||+|.|+|++|++||.+|+++|+||++||.+.+.+ +...+|.|+|++ +++|+.+++|+||+++.++.+|+.
T Consensus 170 ~~~~~~Dv~l~v~~~~f~~Hk~vLaa~S~~F~~~f~~~~~e-~~~~~i~l~~~~--~~~f~~~L~~iYt~~~~~~~~~~~ 246 (312)
T 3hqi_A 170 ENSRFTDCCLCVAGQEFQAHKAILAARSPVFSAMFEHEMEE-SKKNRVEINDVE--PEVFKEMMCFIYTGKAPNLDKMAD 246 (312)
T ss_dssp HTTCSCCEEEEETTEEEEECHHHHHHHCHHHHHHTTC------CCSEEEECSSC--HHHHHHHHHHHHHSCCTTHHHHHH
T ss_pred hCCCCCceEEEECCEEEeHHHHHHHHcCHHHHHHhccCccc-cCCceEEecCCC--HHHHHHHHHhhcCCCCCChHHHHH
Confidence 45789999999999999999999999999999999987766 456799999994 799999999999999999999999
Q ss_pred HHHHhhcccccCccCCCCcHHHHHHHHHHH-hhhchhHHHHHHhhhhhHHHHhhhhc---hhhhHHHHHHH
Q 039661 83 GLRCAAEYLHMTDDYGEGNLITQTEAFLND-VFSDWADAIKALETCQQVLPYAQDLH---VVSRCIDSLAM 149 (597)
Q Consensus 83 ~L~cAA~~LqMte~~~~~NL~~~ce~FL~~-vl~sw~dsi~~L~sC~~Llp~Ae~l~---iv~RCidsLA~ 149 (597)
.|+.||++++|+. |...|+.||.+ +- ..+|..++.+|+.++ +..+|++-|+.
T Consensus 247 ~ll~~A~~~~~~~------l~~~c~~~l~~~~~---------~~n~~~~l~~A~~~~~~~L~~~~~~~i~~ 302 (312)
T 3hqi_A 247 DLLAAADKYALER------LKVMCEDALCSNLS---------VENAAEILILADLHSADQLKTQAVDFINY 302 (312)
T ss_dssp HHHHHHHHTTCHH------HHHHHHHHHHTTCC---------TTTHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHhCHHH------HHHHHHHHHHccCC---------HHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Confidence 9999999999998 99999999998 62 468888888898885 66667766664
No 20
>3fkc_A Transcriptional regulator kaiso; zinc finger and BTB domain containing 33, kaiso transcriptio ZNF-kaiso, ZNF348,wugsc:H_DJ525N14.1; 1.70A {Homo sapiens} PDB: 3m4t_A 3m8v_A
Probab=99.72 E-value=4.8e-18 Score=151.49 Aligned_cols=85 Identities=26% Similarity=0.262 Sum_probs=79.2
Q ss_pred CCCCCeeEEEEECCEEEEeehhhhhccCHHHHHHHhccCCCCCccceEEecCCCCCHHHHHHHHHHHhCCCc-ccchhhH
Q 039661 3 TSGLPSDVTIEVGEMSFHLHKFPLLSRSGLLEKLIEEFCSGDRSVCVLKLDGIPGGAKSFELVIKFCYGVKI-ELTALNA 81 (597)
Q Consensus 3 ~~g~~~DV~I~Vg~~~F~lHK~vLas~S~yfr~lf~~~~~e~~~~~~i~L~d~pGgae~felv~~FcYg~~i-~it~~NV 81 (597)
.++.+|||+|.|||+.|++||.+|+++|+||++||..+ ...|.|++++ +++|+.+++|+|||++ .++.+|+
T Consensus 27 ~~~~~~Dv~l~v~~~~f~aHk~vLaa~S~~F~~~f~~~------~~~i~l~~~~--~~~f~~~l~~~Ytg~~~~~~~~~~ 98 (116)
T 3fkc_A 27 GHGLFCDVTVIVEDRKFRAHKNILSASSTYFHQLFSVA------GQVVELSFIR--AEIFAEILNYIYSSKIVRVRSDLL 98 (116)
T ss_dssp HHTTTCCEEEEETTEEEEECHHHHHHHCHHHHHHTTSC------CSEEEECSSC--HHHHHHHHHHHTTSCCCSCCHHHH
T ss_pred hcCCceeEEEEECCEEEehhHHHHHHcCHHHHHHHcCC------CCEEEeCCCC--HHHHHHHHHhhcCCCcCCCCHHHH
Confidence 46889999999999999999999999999999999864 2589999995 7999999999999999 7999999
Q ss_pred hHHHHhhcccccCc
Q 039661 82 VGLRCAAEYLHMTD 95 (597)
Q Consensus 82 ~~L~cAA~~LqMte 95 (597)
..|+.||++|||+.
T Consensus 99 ~~ll~~A~~l~i~~ 112 (116)
T 3fkc_A 99 DELIKSGQLLGVKF 112 (116)
T ss_dssp HHHHHHHHHHTCHH
T ss_pred HHHHHHHHHhCccc
Confidence 99999999999986
No 21
>2ast_A S-phase kinase-associated protein 1A; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} PDB: 2ass_A* 2e31_B 2e32_B 3l2o_A 1p22_B* 2ovr_A* 2ovp_A 1fqv_B* 2ovq_A*
Probab=99.37 E-value=7.2e-13 Score=124.91 Aligned_cols=93 Identities=17% Similarity=0.215 Sum_probs=81.1
Q ss_pred EEEEE-CCEEEEeehhhhhccCHHHHHHHhc-cCC-CCCccceEEecCCCCCHHHHHHHHHHHhCCC-------------
Q 039661 10 VTIEV-GEMSFHLHKFPLLSRSGLLEKLIEE-FCS-GDRSVCVLKLDGIPGGAKSFELVIKFCYGVK------------- 73 (597)
Q Consensus 10 V~I~V-g~~~F~lHK~vLas~S~yfr~lf~~-~~~-e~~~~~~i~L~d~pGgae~felv~~FcYg~~------------- 73 (597)
|+|.. +|+.|.+|+.+ |++|+||+.||.. +.. + +....|.|++|+ +.+++.|++|||..+
T Consensus 3 v~L~ssDg~~f~v~~~v-A~~S~~i~~m~~~~~~~~e-~~~~~Ipl~~V~--~~iL~kViey~~~h~~~~~~~~~~~~~~ 78 (159)
T 2ast_A 3 IKLQSSDGEIFEVDVEI-AKQSVTIKTMLEDLGMDDE-GDDDPVPLPNVN--AAILKKVIQWCTHHKDDPPPPEDDENKE 78 (159)
T ss_dssp EEEECTTSCEEEEEHHH-HHTCHHHHHHTTSSCSS-------CEECTTSC--HHHHHHHHHHHHHTTTCCC---------
T ss_pred EEEEcCCCCEEEeCHHH-HHHhHHHHHHHHhcCCccc-ccCCCcCCCCcc--HHHHHHHHHHHHHcCcCCCCcccccccc
Confidence 77765 89999999999 8999999999987 443 3 344689999996 599999999999877
Q ss_pred -------------cccchhhHhHHHHhhcccccCccCCCCcHHHHHHHHHHH
Q 039661 74 -------------IELTALNAVGLRCAAEYLHMTDDYGEGNLITQTEAFLND 112 (597)
Q Consensus 74 -------------i~it~~NV~~L~cAA~~LqMte~~~~~NL~~~ce~FL~~ 112 (597)
+.++.+|+..|+.||.||+|.. |++.|+.|+..
T Consensus 79 ~~~~~i~~wD~~F~~id~~~l~eLl~AAnyL~I~~------Lld~~c~~va~ 124 (159)
T 2ast_A 79 KRTDDIPVWDQEFLKVDQGTLFELILAANYLDIKG------LLDVTCKTVAN 124 (159)
T ss_dssp --CCCCCHHHHHHTCSCHHHHHHHHHHHHHHTCHH------HHHHHHHHHHH
T ss_pred cchhhhhHHHHHHHcCCHHHHHHHHHHHHHHhHHH------HHHHHHHHHHH
Confidence 8999999999999999999998 99999999999
No 22
>4ajy_C Transcription elongation factor B polypeptide 1; E3 ubiquitin ligase, transcription factor, hypoxic signaling transcription; 1.73A {Homo sapiens} PDB: 2izv_C 3dcg_B 3zrc_B* 3zrf_B 3ztc_B* 3ztd_B* 3zun_B* 2c9w_C 4awj_B* 4b95_B* 4b9k_B* 2fnj_C 1lqb_B 1lm8_C 2jz3_C 2xai_B 4b9k_E*
Probab=99.20 E-value=2.6e-11 Score=105.25 Aligned_cols=80 Identities=16% Similarity=0.216 Sum_probs=65.4
Q ss_pred EEEEE-CCEEEEeehhhhhccCHHHHHHHhc--cCCCCCccceEEecCCCCCHHHHHHHHHHHh-----C---CCcc---
Q 039661 10 VTIEV-GEMSFHLHKFPLLSRSGLLEKLIEE--FCSGDRSVCVLKLDGIPGGAKSFELVIKFCY-----G---VKIE--- 75 (597)
Q Consensus 10 V~I~V-g~~~F~lHK~vLas~S~yfr~lf~~--~~~e~~~~~~i~L~d~pGgae~felv~~FcY-----g---~~i~--- 75 (597)
|+|.- ||++|.+||.+ |++|+||+.||.. ...| +....|.|++++ +.+++.+++||| + +.|.
T Consensus 4 v~L~SsDg~~F~v~r~v-A~~S~~ik~m~~~~~~~~E-~~~~~I~l~~V~--~~iL~kViey~~~h~~~~~~~~~i~~~~ 79 (97)
T 4ajy_C 4 VKLISSDGHEFIVKREH-ALTSGTIKAMLSGPGQFAE-NETNEVNFREIP--SHVLSKVCMYFTYKVRYTNSSTEIPEFP 79 (97)
T ss_dssp EEEECTTCCEEEEEHHH-HTTSHHHHHHHCCC---------CEEECTTSC--HHHHHHHHHHHHHHHHHTTCCSCCCCCC
T ss_pred EEEEecCCcEEEecHHH-HHHhHHHHHHHHhCCCccc-cCCCceECCCCC--HHHHHHHHHHHHHhcccCCCcCCCCcCc
Confidence 45554 89999999999 9999999999986 3333 345689999996 699999999999 4 6777
Q ss_pred cchhhHhHHHHhhccccc
Q 039661 76 LTALNAVGLRCAAEYLHM 93 (597)
Q Consensus 76 it~~NV~~L~cAA~~LqM 93 (597)
|+++|+..|+.||.||+.
T Consensus 80 i~~~~l~eLl~AAnyL~~ 97 (97)
T 4ajy_C 80 IAPEIALELLMAANFLDC 97 (97)
T ss_dssp CCGGGHHHHHHHHHHHTC
T ss_pred CCHHHHHHHHHHHhhhCC
Confidence 999999999999999973
No 23
>1fs1_B SKP1, cyclin A/CDK2-associated P45; F-BOX, LRR, leucine-rich repeat, SCF, ubiquitin, ubiquitin protein ligase; 1.80A {Homo sapiens} SCOP: a.157.1.1 d.42.1.1 PDB: 1fs2_B 1ldk_D
Probab=99.02 E-value=4.3e-10 Score=104.07 Aligned_cols=89 Identities=18% Similarity=0.248 Sum_probs=79.6
Q ss_pred EEEEE-CCEEEEeehhhhhccCHHHHHHHhccCCCCCccceEEecCCCCCHHHHHHHHHHHhCCC---------------
Q 039661 10 VTIEV-GEMSFHLHKFPLLSRSGLLEKLIEEFCSGDRSVCVLKLDGIPGGAKSFELVIKFCYGVK--------------- 73 (597)
Q Consensus 10 V~I~V-g~~~F~lHK~vLas~S~yfr~lf~~~~~e~~~~~~i~L~d~pGgae~felv~~FcYg~~--------------- 73 (597)
|+|.. +|+.|.+|+.+ |..|+||+.||.... + ..|.|++++ +.+++.|++|||..+
T Consensus 4 v~L~SsDg~~f~v~~~v-A~~S~~ik~ml~~~~-~----~~Ipl~~V~--~~iL~kVieyc~~h~~~~~~~~~~~~~~~~ 75 (141)
T 1fs1_B 4 IKLQSSDGEIFEVDVEI-AKQSVTIKTMLEDLG-M----DPVPLPNVN--AAILKKVIQWCTHHKDDPPPPEDDENKEKR 75 (141)
T ss_dssp EEEECTTSCEEEEEGGG-GGTCHHHHHHHHHTC-C----SSEECTTCC--HHHHHHHHHHHHHHTTCC------------
T ss_pred EEEEeCCCCEEEecHHH-HHHhHHHHHHHHhcC-C----CceecCCcC--HHHHHHHHHHHHHhccCCCccccccccccc
Confidence 67777 89999999998 899999999998632 2 479999996 599999999999544
Q ss_pred -----------cccchhhHhHHHHhhcccccCccCCCCcHHHHHHHHHHH
Q 039661 74 -----------IELTALNAVGLRCAAEYLHMTDDYGEGNLITQTEAFLND 112 (597)
Q Consensus 74 -----------i~it~~NV~~L~cAA~~LqMte~~~~~NL~~~ce~FL~~ 112 (597)
+.++.+++..|+.||.||+|.. |++.|+.|+..
T Consensus 76 ~~~i~~wD~~F~~vd~~~l~eLi~AAnyL~I~~------Lldl~c~~vA~ 119 (141)
T 1fs1_B 76 TDDIPVWDQEFLKVDQGTLFELILAANYLDIKG------LLDVTCKTVAN 119 (141)
T ss_dssp -----HHHHHHTCSCHHHHHHHHHHHHHHTCHH------HHHHHHHHHHH
T ss_pred hhhhhHHHHHHHhCCHHHHHHHHHHHHHHhhhH------HHHHHHHHHHH
Confidence 7899999999999999999998 99999999999
No 24
>2p1m_A SKP1-like protein 1A; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_A* 2p1o_A* 2p1p_A* 2p1q_A* 3c6n_A* 3c6o_A* 3c6p_A* 3ogk_A* 3ogl_A* 3ogm_A*
Probab=98.85 E-value=2.7e-10 Score=107.54 Aligned_cols=90 Identities=20% Similarity=0.326 Sum_probs=49.9
Q ss_pred EEEEE-CCEEEEeehhhhhccCHHHHHHHhccCCCCCccceEEecCCCCCHHHHHHHHHHHhCCC---------------
Q 039661 10 VTIEV-GEMSFHLHKFPLLSRSGLLEKLIEEFCSGDRSVCVLKLDGIPGGAKSFELVIKFCYGVK--------------- 73 (597)
Q Consensus 10 V~I~V-g~~~F~lHK~vLas~S~yfr~lf~~~~~e~~~~~~i~L~d~pGgae~felv~~FcYg~~--------------- 73 (597)
|+|.. +|+.|.+|+.+ |..|+||+.||..... ...|.|++|+ +.+++.|++|||..+
T Consensus 6 v~L~SsDg~~f~v~~~v-A~~S~~ik~ml~~~~~----~~~Ipl~~V~--~~iL~kVieyc~~h~~~~~~~~~~~~~~~~ 78 (160)
T 2p1m_A 6 IVLKSSDGESFEVEEAV-ALESQTIAHMVEDDCV----DNGVPLPNVT--SKILAKVIEYCKRHVEAAASKAEAVEGAAT 78 (160)
T ss_dssp --CCC---------CHH-HHTCTTTC----------------CCTTSC--HHHHHHHHHC--------------------
T ss_pred EEEEcCCCCEEEECHHH-HHHhHHHHHHHHccCC----CCceeCCcCc--HHHHHHHHHHHHHcccCCCccccccccccc
Confidence 66665 89999999998 8999999999986432 2479999996 599999999999755
Q ss_pred ------------cccchhhHhHHHHhhcccccCccCCCCcHHHHHHHHHHH
Q 039661 74 ------------IELTALNAVGLRCAAEYLHMTDDYGEGNLITQTEAFLND 112 (597)
Q Consensus 74 ------------i~it~~NV~~L~cAA~~LqMte~~~~~NL~~~ce~FL~~ 112 (597)
+.++..++..|+.||.||+|.. |++.|+.|+..
T Consensus 79 ~~~~i~~wD~~Fl~vd~~~l~eLi~AAnyL~I~~------Lldl~c~~vA~ 123 (160)
T 2p1m_A 79 SDDDLKAWDADFMKIDQATLFELILAANYLNIKN------LLDLTCQTVAD 123 (160)
T ss_dssp ----------------------CHHHHHHTTCHH------HHHHHHHHHHH
T ss_pred ccchhhHHHHHHHcCCHHHHHHHHHHHHHHhHHH------HHHHHHHHHHH
Confidence 5789999999999999999998 99999999999
No 25
>1hv2_A Elongin C, ELC1; protein-peptide complex, signaling protein; NMR {Saccharomyces cerevisiae} SCOP: d.42.1.1
Probab=98.33 E-value=9.9e-07 Score=76.92 Aligned_cols=80 Identities=19% Similarity=0.201 Sum_probs=66.5
Q ss_pred eEEEEE-CCEEEEeehhhhhccCHHHHHHHhccCCCCCccceEEecCCCCCHHHHHHHHHHHhCCC--------------
Q 039661 9 DVTIEV-GEMSFHLHKFPLLSRSGLLEKLIEEFCSGDRSVCVLKLDGIPGGAKSFELVIKFCYGVK-------------- 73 (597)
Q Consensus 9 DV~I~V-g~~~F~lHK~vLas~S~yfr~lf~~~~~e~~~~~~i~L~d~pGgae~felv~~FcYg~~-------------- 73 (597)
-|++.- +|+.|.+|+.+ |..|++|+.|+..+. + .....|.|++++ +.+++.|++|||.-+
T Consensus 5 ~v~L~SsDg~~f~V~~~v-A~~S~~ik~ml~~~~-e-~~~~~Iplp~V~--~~iL~kVieyc~~h~~~~~~~~~~~~i~~ 79 (99)
T 1hv2_A 5 FVTLVSKDDKEYEISRSA-AMISPTLKAMIEGPF-R-ESKGRIELKQFD--SHILEKAVEYLNYNLKYSGVSEDDDEIPE 79 (99)
T ss_dssp EEEEEETTTEEEEEEHHH-HTTCHHHHHHHHSST-T-TCTTEEEETTSC--HHHHHHHHHHHHHHHHHHHHCSSCSSCCC
T ss_pred EEEEEecCCCEEEECHHH-HHHhHHHHHHHhccc-c-cCCCceecCCcC--HHHHHHHHHHHHHhcccCCCccccccCCC
Confidence 367776 99999999996 899999999998744 2 233589999996 599999999999421
Q ss_pred cccchhhHhHHHHhhccccc
Q 039661 74 IELTALNAVGLRCAAEYLHM 93 (597)
Q Consensus 74 i~it~~NV~~L~cAA~~LqM 93 (597)
..+..+++..|+.||.||++
T Consensus 80 w~vd~~~lfeLi~AAnyLdI 99 (99)
T 1hv2_A 80 FEIPTEMSLELLLAADYLSI 99 (99)
T ss_dssp CCCCHHHHHHHHHHHHHHCC
T ss_pred ccCCHHHHHHHHHHHHHhCc
Confidence 36888999999999999985
No 26
>2fnj_C Transcription elongation factor B polypeptide 1; beta-sandwich, lectin-like, SPRY, protein transport/signaling protein complex; 1.80A {Mus musculus} SCOP: d.42.1.1 PDB: 1lqb_B 1lm8_C 2jz3_C 2xai_B 2c9w_C 2izv_C 3dcg_B 3zrc_B* 3zrf_B
Probab=98.29 E-value=8.4e-07 Score=76.90 Aligned_cols=80 Identities=15% Similarity=0.161 Sum_probs=63.8
Q ss_pred EEEEE-CCEEEEeehhhhhccCHHHHHHHhcc-C-CCCCccceEEecCCCCCHHHHHHHHHHHhCCC-----------cc
Q 039661 10 VTIEV-GEMSFHLHKFPLLSRSGLLEKLIEEF-C-SGDRSVCVLKLDGIPGGAKSFELVIKFCYGVK-----------IE 75 (597)
Q Consensus 10 V~I~V-g~~~F~lHK~vLas~S~yfr~lf~~~-~-~e~~~~~~i~L~d~pGgae~felv~~FcYg~~-----------i~ 75 (597)
|++.- +|+.|.+|+.+ |..|++|+.|+... . .+ +....|.|++++ +.+++.|++|||.-+ ..
T Consensus 3 v~L~SsDg~~f~V~~~~-A~~S~~ik~ml~~~~~~~e-~~~~~Ipl~~V~--~~iL~kVieyc~~h~~~~~~~~~i~~w~ 78 (96)
T 2fnj_C 3 VKLISSDGHEFIVKREH-ALTSGTIKAMLSGPGQFAE-NETNEVNFREIP--SHVLSKVCMYFTYKVRYTNSSTEIPEFP 78 (96)
T ss_dssp EEEECTTSCEEEEEHHH-HTTSHHHHHHHHCC---------CEEECSSCC--HHHHHHHHHHHHHHHHHHSCCSCCCCCC
T ss_pred EEEEecCCCEEEeCHHH-HHHhHHHHHHHHccCCccc-ccCCceeCCCCC--HHHHHHHHHHHHHccccCCCcccCCCcc
Confidence 56666 89999999996 89999999999863 2 22 234589999996 599999999999321 46
Q ss_pred cchhhHhHHHHhhccccc
Q 039661 76 LTALNAVGLRCAAEYLHM 93 (597)
Q Consensus 76 it~~NV~~L~cAA~~LqM 93 (597)
+..+.+..|+.||.||++
T Consensus 79 vd~~~l~eLi~AAnyLdI 96 (96)
T 2fnj_C 79 IAPEIALELLMAANFLDC 96 (96)
T ss_dssp CCTTTHHHHHHHHHHHTC
T ss_pred cCHHHHHHHHHHHHHhCc
Confidence 889999999999999985
No 27
>3v7d_A Suppressor of kinetochore protein 1; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_A* 3mks_A*
Probab=98.28 E-value=1.8e-06 Score=82.17 Aligned_cols=95 Identities=17% Similarity=0.253 Sum_probs=76.0
Q ss_pred eEEEEE-CCEEEEeehhhhhccCHHHHHHHhccCCCC---CccceEEecCCCCCHHHHHHHHHHHhCCC-----------
Q 039661 9 DVTIEV-GEMSFHLHKFPLLSRSGLLEKLIEEFCSGD---RSVCVLKLDGIPGGAKSFELVIKFCYGVK----------- 73 (597)
Q Consensus 9 DV~I~V-g~~~F~lHK~vLas~S~yfr~lf~~~~~e~---~~~~~i~L~d~pGgae~felv~~FcYg~~----------- 73 (597)
-|+|.- +|+.|.+++.+ |..|++++.|+.....++ .....|.|++|+ +.+++.|++|||.-+
T Consensus 8 ~i~L~SsDG~~F~V~~~v-A~~S~tIk~ml~~~~~~~~~~~~~~~IplpnV~--s~iL~kVieyc~~h~~~~~~~~~~~~ 84 (169)
T 3v7d_A 8 NVVLVSGEGERFTVDKKI-AERSLLLKNYLNDMGDDDDEDDDEIVMPVPNVR--SSVLQKVIEWAEHHRDSNFPDEDDDD 84 (169)
T ss_dssp EEEEECTTCCEEEEEHHH-HTTSHHHHHHHHC-----------CEEECTTCC--HHHHHHHHHHHHHTTTCCCCC-----
T ss_pred eEEEEeCCCCEEEecHHH-HHHhHHHHHHHHhcCcccccccCCCceeeCCCC--HHHHHHHHHHHHHcccCCCccccccc
Confidence 466655 89999999997 788999999998643210 112579999996 599999999999321
Q ss_pred --------------cccchhhHhHHHHhhcccccCccCCCCcHHHHHHHHHHH
Q 039661 74 --------------IELTALNAVGLRCAAEYLHMTDDYGEGNLITQTEAFLND 112 (597)
Q Consensus 74 --------------i~it~~NV~~L~cAA~~LqMte~~~~~NL~~~ce~FL~~ 112 (597)
+.+....+..|+.||.||+|.. |++.|+.++..
T Consensus 85 ~~~~~~i~~wD~~Fl~vd~~~LfeLi~AAnyLdIk~------Lldl~c~~vA~ 131 (169)
T 3v7d_A 85 SRKSAPVDSWDREFLKVDQEMLYEIILAANYLNIKP------LLDAGCKVVAE 131 (169)
T ss_dssp ---CCCCCHHHHHHTCSCHHHHHHHHHHHHHTTCHH------HHHHHHHHHHH
T ss_pred ccccccccHHHHHHHcCCHHHHHHHHHHHHHhCcHH------HHHHHHHHHHH
Confidence 4678889999999999999998 99999999988
No 28
>1vcb_B Protein (elongin C); tumor suppressor, cancer, ubiquitin, beta sandwich, transcription, transcriptional elongation; 2.70A {Homo sapiens} SCOP: d.42.1.1
Probab=97.68 E-value=3.9e-05 Score=68.40 Aligned_cols=80 Identities=15% Similarity=0.159 Sum_probs=62.4
Q ss_pred EEEEE-CCEEEEeehhhhhccCHHHHHHHhccC--CCCCccceEEecCCCCCHHHHHHHHHHHhCCC-----------cc
Q 039661 10 VTIEV-GEMSFHLHKFPLLSRSGLLEKLIEEFC--SGDRSVCVLKLDGIPGGAKSFELVIKFCYGVK-----------IE 75 (597)
Q Consensus 10 V~I~V-g~~~F~lHK~vLas~S~yfr~lf~~~~--~e~~~~~~i~L~d~pGgae~felv~~FcYg~~-----------i~ 75 (597)
|+|.- +|..|.+++. .|..|+.++.|+.... .+ .....|.|++|+ +.+++.|++|||--+ ..
T Consensus 19 v~L~SsDG~~F~V~~~-~A~~S~tIk~ml~~~~~~~e-~~~~~IplpnV~--s~iL~kVieyc~~h~~~~~~~~~i~~w~ 94 (112)
T 1vcb_B 19 VKLISSDGHEFIVKRE-HALTSGTIKAMLSGPGQFAE-NETNEVNFREIP--SHVLSKVCMYFTYKVRYTNSSTEIPEFP 94 (112)
T ss_dssp EEEECTTSCEEEEEHH-HHHTSHHHHHHSSCC---------CEEECSSCC--HHHHHHHHHHHHHHHHHSSCSSCCCCCC
T ss_pred EEEEcCCCCEEEECHH-HHHHhHHHHHHHHhcCCccc-ccCCceeCCCCC--HHHHHHHHHHHHHhhhccCCcCCCCCcc
Confidence 55553 9999999999 5789999999998532 12 223579999996 599999999998311 46
Q ss_pred cchhhHhHHHHhhccccc
Q 039661 76 LTALNAVGLRCAAEYLHM 93 (597)
Q Consensus 76 it~~NV~~L~cAA~~LqM 93 (597)
+..+++..|+.||.||++
T Consensus 95 vd~~~lfeLi~AAnyLdI 112 (112)
T 1vcb_B 95 IAPEIALELLMAANFLDC 112 (112)
T ss_dssp CCHHHHHHHHHHHHHHTC
T ss_pred cCHHHHHHHHHHHHHhCc
Confidence 889999999999999985
No 29
>3drz_A BTB/POZ domain-containing protein KCTD5; potassium channel domain T1, pentamer, unkno function; 1.90A {Homo sapiens}
Probab=97.42 E-value=0.00065 Score=59.64 Aligned_cols=94 Identities=18% Similarity=0.211 Sum_probs=71.3
Q ss_pred eEEEEECCEEEEeehhhhhccC-HHHHHHHhccCC---CCCccceEEecCCCCCHHHHHHHHHHHhCCCcccch-hhHhH
Q 039661 9 DVTIEVGEMSFHLHKFPLLSRS-GLLEKLIEEFCS---GDRSVCVLKLDGIPGGAKSFELVIKFCYGVKIELTA-LNAVG 83 (597)
Q Consensus 9 DV~I~Vg~~~F~lHK~vLas~S-~yfr~lf~~~~~---e~~~~~~i~L~d~pGgae~felv~~FcYg~~i~it~-~NV~~ 83 (597)
=|+|.|||+.|...+..|.... .+|.+||..... ......++-+ |- .|+.|+.|++|..+|++.+.. -.+..
T Consensus 7 ~v~LNVGG~~f~t~~~TL~~~p~s~L~~~~~~~~~~~~~~d~~~~~fi-DR--dp~~F~~IL~~lr~g~l~~p~~~~~~~ 83 (107)
T 3drz_A 7 WVRLNVGGTYFLTTRQTLCRDPKSFLYRLCQADPDLDSDKDETGAYLI-DR--DPTYFGPVLNYLRHGKLVINKDLAEEG 83 (107)
T ss_dssp EEEEEETTEEEEEEHHHHTSSTTSHHHHHHTTCGGGGGGBCTTSCEEE-CS--CHHHHHHHHHHHHHSCCCCCTTSCHHH
T ss_pred EEEEEECCEEEEECHHHHhcCCCcchhHHHhcCCCCCcCCCCCceEEe-cC--ChHHHHHHHHHhCCCeeCCCCCCCHHH
Confidence 4788999999999999999875 578999875311 0001234544 33 579999999999999988744 23467
Q ss_pred HHHhhcccccCccCCCCcHHHHHHHHHH
Q 039661 84 LRCAAEYLHMTDDYGEGNLITQTEAFLN 111 (597)
Q Consensus 84 L~cAA~~LqMte~~~~~NL~~~ce~FL~ 111 (597)
++..|+|+++++ |++.|+.-+.
T Consensus 84 l~~Ea~fy~l~~------L~~~l~~~i~ 105 (107)
T 3drz_A 84 VLEEAEFYNITS------LIKLVKDKIR 105 (107)
T ss_dssp HHHHHHHHTCHH------HHHHHHHHHH
T ss_pred HHHHHHHCCCHH------HHHHHHHHHh
Confidence 999999999998 9999887543
No 30
>3drx_A BTB/POZ domain-containing protein KCTD5; golgi, grAsp55, potassium channel domain T1, pentameric assembly, HOST-virus interaction, nucleus; 3.11A {Homo sapiens} PDB: 3dry_A
Probab=95.30 E-value=0.036 Score=54.16 Aligned_cols=95 Identities=19% Similarity=0.219 Sum_probs=71.3
Q ss_pred eEEEEECCEEEEeehhhhhccC-HHHHHHHhccCCC---CCccceEEecCCCCCHHHHHHHHHHHhCCCcccch-hhHhH
Q 039661 9 DVTIEVGEMSFHLHKFPLLSRS-GLLEKLIEEFCSG---DRSVCVLKLDGIPGGAKSFELVIKFCYGVKIELTA-LNAVG 83 (597)
Q Consensus 9 DV~I~Vg~~~F~lHK~vLas~S-~yfr~lf~~~~~e---~~~~~~i~L~d~pGgae~felv~~FcYg~~i~it~-~NV~~ 83 (597)
=|+|.|||+.|..-+..|.... .+|.+||.....- .....++-|. - .|..|+.|++|.-+|++.+.. -.+..
T Consensus 13 ~V~LNVGG~~F~Tt~sTL~r~PdS~L~~lfs~~~~~~~~~De~geyFID-R--DP~~F~~ILnyLRtG~L~lP~~~~~~~ 89 (202)
T 3drx_A 13 WVRLNVGGTYFLTTRQTLCRDPKSFLYRLCQADPDLDSDKDETGAYLID-R--DPTYFGPVLNYLRHGKLVINKDLAEEG 89 (202)
T ss_dssp EEEEEETTEEEEEETTGGGSCTTSSTHHHHSCCCC----BCTTCCEEEC-S--CSTTHHHHHHHHHHSCCCCCTTSCHHH
T ss_pred EEEEEECCEEEEEeHHHHhCCCcchHHHHhcCccccCcccCCCccEEec-C--ChHHHHHHHHHhcCCccCCCCCCCHHH
Confidence 3678999999999999998764 4889998753110 0012344442 2 458999999999999998743 23456
Q ss_pred HHHhhcccccCccCCCCcHHHHHHHHHHH
Q 039661 84 LRCAAEYLHMTDDYGEGNLITQTEAFLND 112 (597)
Q Consensus 84 L~cAA~~LqMte~~~~~NL~~~ce~FL~~ 112 (597)
++.-|+|+++++ |+..|..-+.+
T Consensus 90 l~eEA~FygL~~------Lv~~l~~~i~e 112 (202)
T 3drx_A 90 VLEEAEFYNITS------LIKLVKDKIRE 112 (202)
T ss_dssp HHHHHHHTTCHH------HHHHHHHHHHH
T ss_pred HHHHHHHCCcHH------HHHHHHHHHHH
Confidence 999999999998 99999888876
No 31
>3kvt_A Potassium channel protein SHAW; tetramerization domain, molecular recogni zinc-binding; 2.00A {Aplysia californica} SCOP: d.42.1.2
Probab=94.50 E-value=0.014 Score=52.11 Aligned_cols=83 Identities=18% Similarity=0.195 Sum_probs=60.5
Q ss_pred EEEEECCEEEEeehhhhhccCH-HHHHHHhccCCCCCccceEEecCCCCCHHHHHHHHHHHhCCCcccch-hhHhHHHHh
Q 039661 10 VTIEVGEMSFHLHKFPLLSRSG-LLEKLIEEFCSGDRSVCVLKLDGIPGGAKSFELVIKFCYGVKIELTA-LNAVGLRCA 87 (597)
Q Consensus 10 V~I~Vg~~~F~lHK~vLas~S~-yfr~lf~~~~~e~~~~~~i~L~d~pGgae~felv~~FcYg~~i~it~-~NV~~L~cA 87 (597)
|+|.|||+.|...+..|....+ .|.+|+.....-+....++-|. -.|..|+.|++|.-+|++.+.. -.+..++.-
T Consensus 7 V~LNVGG~~f~T~~~TL~~~P~s~L~~l~~~~~~~~~~~g~~FiD---Rdp~~F~~ILnylR~G~l~~p~~~~~~~~~~E 83 (115)
T 3kvt_A 7 VIINVGGIRHETYKATLKKIPATRLSRLTEGMLNYDPVLNEYFFD---RHPGVFAQIINYYRSGKLHYPTDVCGPLFEEE 83 (115)
T ss_dssp EEEEETTEEEEEEHHHHTTSCSSTTTTCCTTSTTEETTTTEEEEC---SCTTTHHHHHHHHHHSCBCCCSSSCHHHHHHH
T ss_pred EEEEECCEEEEecHHHHhcCCCccHHHHhcCCCCCCCCCCcEEEe---cChHHHHHHHHHhcCCCCCCCCcccHHHHHHH
Confidence 7899999999999999987633 4556665321000122355543 2458999999999999987754 356789999
Q ss_pred hcccccCc
Q 039661 88 AEYLHMTD 95 (597)
Q Consensus 88 A~~LqMte 95 (597)
|+|+++++
T Consensus 84 a~fy~i~~ 91 (115)
T 3kvt_A 84 LEFWGLDS 91 (115)
T ss_dssp HHHHTCCG
T ss_pred HHHhCCCh
Confidence 99999998
No 32
>1s1g_A Potassium voltage-gated channel subfamily D membe; K+ channels, tetramerization domain, T1 domain, transport PR; 2.60A {Homo sapiens} SCOP: d.42.1.2
Probab=92.83 E-value=0.11 Score=46.95 Aligned_cols=81 Identities=10% Similarity=0.070 Sum_probs=56.6
Q ss_pred eEEEEECCEEEEeehhhhhccCHHHHHHHhccCC---CCCccceEEecCCCCCHHHHHHHHHHHhCCCcccchh-hHhHH
Q 039661 9 DVTIEVGEMSFHLHKFPLLSRSGLLEKLIEEFCS---GDRSVCVLKLDGIPGGAKSFELVIKFCYGVKIELTAL-NAVGL 84 (597)
Q Consensus 9 DV~I~Vg~~~F~lHK~vLas~S~yfr~lf~~~~~---e~~~~~~i~L~d~pGgae~felv~~FcYg~~i~it~~-NV~~L 84 (597)
=|+|.|||+.|..-+..|...-+- |+..... .......+-| .-.|+.|+.|++|.-+|++.+..+ .+..+
T Consensus 14 ~V~LNVGG~~F~t~~~TL~~~p~S---~L~~~~~~~~~~~~~g~~Fi---DRdp~~F~~ILnflR~G~l~~p~~~~~~~l 87 (124)
T 1s1g_A 14 LIVLNVSGRRFQTWRTTLERYPDT---LLGSTEKEFFFNEDTKEYFF---DRDPEVFRCVLNFYRTGKLHYPRYECISAY 87 (124)
T ss_dssp EEEEEETTEEEEEEHHHHTTSTTS---STTSSGGGGTBCSSSCSEEE---CSCHHHHHHHHHHHHHSCBCCCTTSCHHHH
T ss_pred EEEEEeCCEEEEEeHHHHhcCCCc---eecccCCcccccCCCCcEEE---cCChHHHHHHHHHHhcCCCCCCCCcCHHHH
Confidence 478899999999999988765321 2222100 0011234444 235799999999999999876543 46789
Q ss_pred HHhhcccccCc
Q 039661 85 RCAAEYLHMTD 95 (597)
Q Consensus 85 ~cAA~~LqMte 95 (597)
+.-|+|+++++
T Consensus 88 ~~Ea~fy~i~~ 98 (124)
T 1s1g_A 88 DDELAFYGILP 98 (124)
T ss_dssp HHHHHHTTCCG
T ss_pred HHHHHHcCCCh
Confidence 99999999998
No 33
>1t1d_A Protein (potassium channel KV1.1); potassium channels, tetramerization domain, aplysia KV1.1, proton transport, membrane protein; 1.51A {Aplysia californica} SCOP: d.42.1.2 PDB: 1eod_A 1eof_A 1eoe_A 1a68_A 1qdv_A 1exb_E* 1qdw_A 1dsx_A
Probab=92.52 E-value=0.18 Score=43.82 Aligned_cols=83 Identities=14% Similarity=0.114 Sum_probs=58.0
Q ss_pred EEEEECCEEEEeehhhhhccC-HHHHHHHhccCCCCCccceEEecCCCCCHHHHHHHHHHHhC-CCcccch-hhHhHHHH
Q 039661 10 VTIEVGEMSFHLHKFPLLSRS-GLLEKLIEEFCSGDRSVCVLKLDGIPGGAKSFELVIKFCYG-VKIELTA-LNAVGLRC 86 (597)
Q Consensus 10 V~I~Vg~~~F~lHK~vLas~S-~yfr~lf~~~~~e~~~~~~i~L~d~pGgae~felv~~FcYg-~~i~it~-~NV~~L~c 86 (597)
|+|.|||+.|...+..|...- ..+.+|+.....-+....++-+.- .|+.|+.|++|.-+ |++.+.+ ..+..++.
T Consensus 3 v~LNVGG~~f~t~~~TL~~~p~s~L~~~~~~~~~~~~~~~eyFiDR---dp~~F~~ILnflR~~G~l~~p~~~~~~~~~~ 79 (100)
T 1t1d_A 3 VVINVSGLRFETQLKTLNQFPDTLLGNPQKRNRYYDPLRNEYFFDR---NRPSFDAILYFYQSGGRLRRPVNVPLDVFSE 79 (100)
T ss_dssp EEEEETTEEEEEEHHHHHTSTTSTTTCHHHHGGGEETTTTEEEECS---CSTTHHHHHHHHHTTSCCCCCTTSCHHHHHH
T ss_pred EEEEECCEEEEeeHHHHhcCCCccccchhccccccCCCceeEEEcC---ChHHHHHHHHHHhcCCcccCCCCCCHHHHHH
Confidence 789999999999999997652 245555543110001123555532 45899999999997 8987643 24567999
Q ss_pred hhcccccCc
Q 039661 87 AAEYLHMTD 95 (597)
Q Consensus 87 AA~~LqMte 95 (597)
-|+|.++++
T Consensus 80 Ea~fy~i~~ 88 (100)
T 1t1d_A 80 EIKFYELGE 88 (100)
T ss_dssp HHHHTTCCH
T ss_pred HHHHcCCCH
Confidence 999999997
No 34
>2nz0_B Potassium voltage-gated channel subfamily D membe; KV4.3, kchip1, membrane protein; 3.20A {Homo sapiens} PDB: 2i2r_A
Probab=90.86 E-value=0.13 Score=47.27 Aligned_cols=82 Identities=11% Similarity=0.098 Sum_probs=57.3
Q ss_pred eeEEEEECCEEEEeehhhhhccCHHHHHHHhccCCC---CCccceEEecCCCCCHHHHHHHHHHHhCCCcccch-hhHhH
Q 039661 8 SDVTIEVGEMSFHLHKFPLLSRSGLLEKLIEEFCSG---DRSVCVLKLDGIPGGAKSFELVIKFCYGVKIELTA-LNAVG 83 (597)
Q Consensus 8 ~DV~I~Vg~~~F~lHK~vLas~S~yfr~lf~~~~~e---~~~~~~i~L~d~pGgae~felv~~FcYg~~i~it~-~NV~~ 83 (597)
.=|+|.|||+.|...+..|...-+- |+...... .....++-|. -.++.|+.|++|.-+|++.+.. ..+..
T Consensus 35 ~~V~LNVGG~~F~T~~~TL~~~P~S---~L~~~~~~~~~~~~~g~yFiD---Rdp~~F~~ILnflR~G~l~~p~~~~~~~ 108 (140)
T 2nz0_B 35 ELIVLNVSGRRFQTWRTTLERYPDT---LLGSTEKEFFFNEDTKEYFFD---RDPEVFRCVLNFYRTGKLHYPRYECISA 108 (140)
T ss_dssp CEEEEEETTEEEEEEHHHHHTCTTS---TTTSGGGGGSEETTTTEEEEC---SCHHHHHHHHHHHHHSSBCCCTTSCHHH
T ss_pred CEEEEEECCEEEEeeHHHHhcCCCe---eecccCCcccccCCCCeEEEe---CCcHHHHHHHHHHhcCCcCCCCCcCHHH
Confidence 3578899999999999988765321 22221100 0112345543 3579999999999999988654 24778
Q ss_pred HHHhhcccccCc
Q 039661 84 LRCAAEYLHMTD 95 (597)
Q Consensus 84 L~cAA~~LqMte 95 (597)
++.-|+|+++++
T Consensus 109 l~eEa~fy~i~~ 120 (140)
T 2nz0_B 109 YDDELAFYGILP 120 (140)
T ss_dssp HHHHHHHHTCCG
T ss_pred HHHHHHHcCCCh
Confidence 999999999998
No 35
>1nn7_A Potassium channel KV4.2; teteramerization domain, voltage gated potassium channel SHAL, membrane protein; 2.10A {Rattus norvegicus} SCOP: d.42.1.2
Probab=90.61 E-value=0.13 Score=44.91 Aligned_cols=80 Identities=10% Similarity=0.100 Sum_probs=56.1
Q ss_pred EEEEECCEEEEeehhhhhccCHHHHHHHhccCCC---CCccceEEecCCCCCHHHHHHHHHHHhCCCcccch-hhHhHHH
Q 039661 10 VTIEVGEMSFHLHKFPLLSRSGLLEKLIEEFCSG---DRSVCVLKLDGIPGGAKSFELVIKFCYGVKIELTA-LNAVGLR 85 (597)
Q Consensus 10 V~I~Vg~~~F~lHK~vLas~S~yfr~lf~~~~~e---~~~~~~i~L~d~pGgae~felv~~FcYg~~i~it~-~NV~~L~ 85 (597)
|+|.|||+.|...+..|....+- |+...... ......+-+.- .|+.|+.|++|.-+|++.+.+ ..+..++
T Consensus 2 V~LNVGG~~f~t~~~TL~~~p~s---~L~~~~~~~~~~~~~~~~FiDR---dp~~F~~ILnflR~g~l~~p~~~~~~~l~ 75 (105)
T 1nn7_A 2 IVLNVSGTRFQTWQDTLERYPDT---LLGSSERDFFYHPETQQYFFDR---DPDIFRHILNFYRTGKLHYPRHECISAYD 75 (105)
T ss_dssp EEEEETTEEEEECHHHHHTSCSS---STTSGGGGGGEEGGGTEEEECS---CTTTHHHHHHHHHHSCBCCCTTSCHHHHH
T ss_pred EEEEECCEEEEEeHHHHhcCCCc---cccccCCcccccCCCCcEEEeC---CcHHHHHHHHHHhcCCCCCCCCcCHHHHH
Confidence 78999999999999988765321 22221100 01123455432 468999999999999987654 3467899
Q ss_pred HhhcccccCc
Q 039661 86 CAAEYLHMTD 95 (597)
Q Consensus 86 cAA~~LqMte 95 (597)
.-|+|+++++
T Consensus 76 ~Ea~fy~i~~ 85 (105)
T 1nn7_A 76 EELAFFGLIP 85 (105)
T ss_dssp HHHHHHTCCS
T ss_pred HHHHHcCCCH
Confidence 9999999998
No 36
>2eqx_A Kelch repeat and BTB domain-containing protein 4; BACK domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=84.79 E-value=0.6 Score=40.18 Aligned_cols=36 Identities=11% Similarity=-0.002 Sum_probs=30.1
Q ss_pred ccccccCChHHHHHHHHHHHhCCCChHHHHHHHHHHHHh
Q 039661 192 FGDVSSLSFPLYKLFIFALESRSMKPEKIAASLMCYANR 230 (597)
Q Consensus 192 ~EDl~~L~l~lf~rvI~am~~~g~~~e~I~~aL~~Ya~k 230 (597)
.+++..||.+....+|+.. ..+++.|+++++.|++.
T Consensus 46 ~~eFl~L~~~~L~~lL~sd---v~~E~~vf~av~~Wv~~ 81 (105)
T 2eqx_A 46 TEEFLHLPHRLLTDIISDG---VPCSQNPTEAIEAWINF 81 (105)
T ss_dssp SHHHHHSCHHHHHHHHHTC---EETTSCHHHHHHHHHHT
T ss_pred cccHhhCCHHHHHHHHcCC---CCCHHHHHHHHHHHHHc
Confidence 3688899999999999984 45677899999999854
No 37
>3vmx_A Voltage-gated hydrogen channel 1; coiled-coil, ION channel, ION transport, membrane protein; 1.45A {Mus musculus}
Probab=68.07 E-value=3.6 Score=31.14 Aligned_cols=28 Identities=7% Similarity=0.123 Sum_probs=24.2
Q ss_pred chhhHHHHHHHHHHHHHHhHHHHHhhhc
Q 039661 519 GDGGMKERVSELEKEYFSMKEALQKIVM 546 (597)
Q Consensus 519 ~~~~mr~rv~eLEkec~~mk~~~~k~~k 546 (597)
-.+.+-+||.+||..|..+.|||+++.+
T Consensus 12 ~n~~L~~kv~~Le~~c~~~eQEieRL~~ 39 (48)
T 3vmx_A 12 INIQLATKIQHLEFSCSEKEQEIERLNK 39 (48)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHccHHHHHHHHHHH
Confidence 3567789999999999999999998753
No 38
>1pd7_B MAD1; PAH2, SIN3, eukaryotic transcriptional regulation, protein-protein interactions; NMR {Mus musculus}
Probab=61.65 E-value=1.8 Score=28.60 Aligned_cols=16 Identities=38% Similarity=0.364 Sum_probs=13.8
Q ss_pred hhHhHHHHhhcccccC
Q 039661 79 LNAVGLRCAAEYLHMT 94 (597)
Q Consensus 79 ~NV~~L~cAA~~LqMt 94 (597)
.||+.|+.||+||+=-
T Consensus 3 ~nvq~LLeAAeyLErr 18 (26)
T 1pd7_B 3 MNIQMLLEAADYLERR 18 (26)
T ss_dssp CSTHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHH
Confidence 4899999999999744
No 39
>3vp9_A General transcriptional corepressor TUP1; four helix bundle; 1.80A {Saccharomyces cerevisiae} PDB: 3vp8_A
Probab=58.59 E-value=5 Score=34.39 Aligned_cols=30 Identities=20% Similarity=0.214 Sum_probs=25.9
Q ss_pred cccccchhhHHHHHHHHHHHHHHhHHHHHh
Q 039661 514 QDRVKGDGGMKERVSELEKEYFSMKEALQK 543 (597)
Q Consensus 514 ~~~~~~~~~mr~rv~eLEkec~~mk~~~~k 543 (597)
+.|..||+.||..|.+||..+..||+..+.
T Consensus 46 ~~Qi~Emq~Ir~tvyeLE~~h~kmKq~YEe 75 (92)
T 3vp9_A 46 NQQLAEMQQIRNTVYERELTHRKMKDAYEE 75 (92)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 446669999999999999999999997754
No 40
>2r9r_B Paddle chimera voltage gated potassium channel KV; voltage sensor, voltage dependent, ION CH shaker, membrane protein, eukaryotic; HET: NAP PGW; 2.40A {Rattus norvegicus} PDB: 3lnm_B* 3lut_B* 2a79_B*
Probab=53.02 E-value=13 Score=40.67 Aligned_cols=84 Identities=11% Similarity=0.075 Sum_probs=55.5
Q ss_pred eEEEEECCEEEEeehhhhhccCH-HHHHHHhccCCCCCccceEEecCCCCCHHHHHHHHHHHhC-CCcccchh-hHhHHH
Q 039661 9 DVTIEVGEMSFHLHKFPLLSRSG-LLEKLIEEFCSGDRSVCVLKLDGIPGGAKSFELVIKFCYG-VKIELTAL-NAVGLR 85 (597)
Q Consensus 9 DV~I~Vg~~~F~lHK~vLas~S~-yfr~lf~~~~~e~~~~~~i~L~d~pGgae~felv~~FcYg-~~i~it~~-NV~~L~ 85 (597)
=|+|.|||+.|...+..|...-+ .+-+++.....-+....++-+ .-.|+.|+.+++|..+ |++.+..+ .+..+.
T Consensus 53 ~v~lNVgG~~f~t~~~tL~~~p~s~l~~~~~~~~~~~~~~~~~f~---DR~~~~F~~IL~~~r~~g~l~~p~~~~~~~~~ 129 (514)
T 2r9r_B 53 RVVINISGLRFETQLKTLAQFPETLLGDPKKRMRYFDPLRNEYFF---DRNRPSFDAILYYYQSGGRLRRPVNVPLDIFS 129 (514)
T ss_dssp EEEEEETTEEEEEEHHHHTTSTTSTTTCHHHHGGGEETTTTEEEE---CSCHHHHHHHHHHHHHTSCCCCCTTSCHHHHH
T ss_pred EEEEEeCCEEEEecHHHHhcCCCCcccccccCCcccCCCCCCEEE---cCChHHHHHHHHHHhcCCccccCCcccHHHHH
Confidence 46889999999999988865421 122233221100011234554 2357999999999998 99876432 455688
Q ss_pred HhhcccccCc
Q 039661 86 CAAEYLHMTD 95 (597)
Q Consensus 86 cAA~~LqMte 95 (597)
.-|+|.++.+
T Consensus 130 ~E~~f~~i~~ 139 (514)
T 2r9r_B 130 EEIRFYELGE 139 (514)
T ss_dssp HHHHHTTCCH
T ss_pred HHHHhcCCCH
Confidence 9999999998
No 41
>2yy0_A C-MYC-binding protein; conserved hypothetical protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; 2.40A {Homo sapiens}
Probab=49.61 E-value=7.1 Score=30.06 Aligned_cols=34 Identities=18% Similarity=0.110 Sum_probs=28.1
Q ss_pred cccccccccccccccccchhhHHHHHHHHHHHHHHhHHHHHh
Q 039661 502 PKIDGSRQMVPVQDRVKGDGGMKERVSELEKEYFSMKEALQK 543 (597)
Q Consensus 502 ~re~~~lr~~~~~~~~~~~~~mr~rv~eLEkec~~mk~~~~k 543 (597)
.-|.+.||. |++.+|.|+.+|.+++..++..+.+
T Consensus 18 ~~d~eaLk~--------E~~eLk~k~~~L~~~~~el~~~l~~ 51 (53)
T 2yy0_A 18 NPEIELLRL--------ELAEMKEKYEAIVEENKKLKAKLAQ 51 (53)
T ss_dssp CHHHHHHHH--------HHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred hhhHHHHHH--------HHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 346777888 8999999999999999988888764
No 42
>3a2a_A Voltage-gated hydrogen channel 1; voltage-gated proton channel, alternative splicing, coiled C transport, ionic channel, membrane, transmembrane; 2.00A {Homo sapiens}
Probab=49.48 E-value=16 Score=28.32 Aligned_cols=26 Identities=8% Similarity=0.179 Sum_probs=22.3
Q ss_pred hhHHHHHHHHHHHHHHhHHHHHhhhc
Q 039661 521 GGMKERVSELEKEYFSMKEALQKIVM 546 (597)
Q Consensus 521 ~~mr~rv~eLEkec~~mk~~~~k~~k 546 (597)
.++-.+|.+||..|..|-|||+++.+
T Consensus 21 ~~L~~kv~~Le~~c~e~eQEieRL~~ 46 (58)
T 3a2a_A 21 VQLAAKIQHLEFSCSEKEQEIERLNK 46 (58)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 35567999999999999999998764
No 43
>1vjh_A BET V I allergen family; structural genomics, center for eukaryotic structural genomics, protein structure initiative, CESG, plant protein; 2.10A {Arabidopsis thaliana} SCOP: d.129.3.1 PDB: 2q3q_A
Probab=48.55 E-value=12 Score=32.86 Aligned_cols=33 Identities=9% Similarity=-0.066 Sum_probs=25.3
Q ss_pred hhcCCCCCChhhHHHHHHhcCCCCCCCCchhHHHHHHHHHhCCC
Q 039661 385 EVAPDVNLKPLKFETLASVIPDYARPNDDGIYHAIDIYLKAHPW 428 (597)
Q Consensus 385 EiA~D~nL~~~kF~~Lae~lP~~aR~~~DgLYrAIDiYLKaHp~ 428 (597)
|...|.+.+|.++.+.+ .|+++|||-||-+||.
T Consensus 90 e~~~~~~~~p~~~~~~~-----------~~~~k~ie~yll~~p~ 122 (122)
T 1vjh_A 90 EKVHKDIDDPHSIIDES-----------VKYFKKLDEAILNFKE 122 (122)
T ss_dssp EESSTTSCCSHHHHHHH-----------HHHHHHHHHHHHHC--
T ss_pred EECCCCCCCHHHHHHHH-----------HHHHHHHHHHHhhCCC
Confidence 45567788888887655 6889999999999983
No 44
>1deb_A APC protein, adenomatous polyposis coli protein; coiled coil, tumor suppressor, structural protein; 2.40A {Homo sapiens} SCOP: h.1.18.1
Probab=30.59 E-value=20 Score=27.33 Aligned_cols=36 Identities=22% Similarity=0.258 Sum_probs=30.8
Q ss_pred CcccccccccccccccccchhhHHHHHHHHHHHHHHhHHHHHhh
Q 039661 501 LPKIDGSRQMVPVQDRVKGDGGMKERVSELEKEYFSMKEALQKI 544 (597)
Q Consensus 501 ~~re~~~lr~~~~~~~~~~~~~mr~rv~eLEkec~~mk~~~~k~ 544 (597)
+..||-.||. |++.=...++.||.|-+.||.-+..+
T Consensus 15 Lk~ENshLrr--------EL~dNS~~lskLE~ets~mKevlk~l 50 (54)
T 1deb_A 15 LKMENSNLRQ--------ELEDNSNHLTKLETEASNMKEVLKQL 50 (54)
T ss_dssp HHHHHHHHHH--------HHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHhhHHHH--------HHHhhHHHHHHHHhhhhhHHHHHHHH
Confidence 4568888888 99999999999999999999877654
No 45
>3b0b_C CENP-X, centromere protein X; histone fold, DNA binding, DNA, nucleus, DNA binding protein; 2.15A {Gallus gallus} PDB: 3vh5_D 3vh6_D
Probab=23.48 E-value=53 Score=27.33 Aligned_cols=43 Identities=14% Similarity=0.221 Sum_probs=31.8
Q ss_pred CccchHHHHHHHHHHHHhcccCCCcccccCCCCCCCCCCChhHHHHHHHHHhhhhhh
Q 039661 330 DTLYDIDCVQRILDHFMSVNLHSSHCIIEEGQPLSGSGSLTPMTMVATLMDGYLAEV 386 (597)
Q Consensus 330 ~tlyDvd~V~ril~~Fl~~~~~~~~~~~~~~~~~~~~~~~~~l~~VakLvD~YLaEi 386 (597)
+..++-+++.||+..+...+.. .-+..++..+|++||-|..|.
T Consensus 6 ~~~~~~~lI~ril~~~f~~~kt--------------rI~~dAl~l~aeyl~iFV~EA 48 (81)
T 3b0b_C 6 EGGFRKETVERLLRLHFRDGRT--------------RVNGDALLLMAELLKVFVREA 48 (81)
T ss_dssp -CCCCHHHHHHHHHHHCCSTTC--------------EECHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHhccCcc--------------cccHHHHHHHHHHHHHHHHHH
Confidence 4567899999999986544321 124568999999999999884
Done!