Query 039662
Match_columns 366
No_of_seqs 169 out of 1531
Neff 9.8
Searched_HMMs 29240
Date Mon Mar 25 20:41:30 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/039662.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/039662hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2e31_A FBS1, F-box only protei 99.2 1.1E-11 3.7E-16 109.3 4.9 48 3-50 51-99 (297)
2 3ii7_A Kelch-like protein 7; p 99.2 7.7E-09 2.6E-13 92.9 22.9 208 102-341 51-279 (306)
3 1fs1_A SKP2 F-BOX, cyclin A/CD 99.2 1.6E-11 5.3E-16 79.9 3.6 42 3-44 9-50 (53)
4 4asc_A Kelch repeat and BTB do 99.1 1.4E-08 4.7E-13 91.7 23.1 194 118-341 69-284 (315)
5 1zgk_A Kelch-like ECH-associat 99.1 6.2E-08 2.1E-12 87.1 27.0 192 117-341 91-294 (308)
6 2vpj_A Kelch-like protein 12; 99.1 2.7E-08 9.3E-13 89.0 23.9 207 102-341 58-285 (301)
7 2xn4_A Kelch-like protein 2; s 99.1 3.1E-08 1.1E-12 88.7 24.1 207 102-341 57-283 (302)
8 2woz_A Kelch repeat and BTB do 99.1 2.9E-08 9.8E-13 89.7 22.5 192 118-340 80-293 (318)
9 2vpj_A Kelch-like protein 12; 99.0 2E-07 7E-12 83.2 25.3 192 117-341 32-238 (301)
10 3ii7_A Kelch-like protein 7; p 99.0 9.5E-08 3.2E-12 85.7 22.9 191 117-341 25-232 (306)
11 2xn4_A Kelch-like protein 2; s 99.0 1.6E-07 5.5E-12 84.0 23.0 192 117-341 31-236 (302)
12 1zgk_A Kelch-like ECH-associat 99.0 4.4E-08 1.5E-12 88.1 18.7 196 117-341 40-247 (308)
13 2uvk_A YJHT; unknown function, 98.9 8.7E-08 3E-12 87.9 19.7 214 103-341 16-301 (357)
14 4asc_A Kelch repeat and BTB do 98.9 5.9E-07 2E-11 80.9 22.3 198 117-341 14-228 (315)
15 2woz_A Kelch repeat and BTB do 98.8 8E-07 2.7E-11 80.1 22.6 206 107-341 16-238 (318)
16 2zwa_A Leucine carboxyl methyl 98.8 6.3E-07 2.2E-11 89.7 22.0 201 117-342 413-643 (695)
17 3v7d_B Cell division control p 98.8 1.2E-05 4.2E-10 75.8 29.1 45 3-47 15-60 (464)
18 2ovr_B FBW7, F-BOX/WD repeat p 98.7 3.8E-05 1.3E-09 72.1 30.9 47 3-49 19-65 (445)
19 2uvk_A YJHT; unknown function, 98.5 1.1E-05 3.6E-10 73.9 19.7 149 180-341 168-349 (357)
20 1p22_A F-BOX/WD-repeat protein 98.5 3.1E-05 1.1E-09 72.6 22.9 47 3-49 11-61 (435)
21 3l2o_B F-box only protein 4; s 98.2 5.2E-07 1.8E-11 78.6 2.6 49 3-51 5-53 (312)
22 1k3i_A Galactose oxidase precu 97.9 0.00023 8E-09 70.6 15.8 218 103-341 250-504 (656)
23 1k3i_A Galactose oxidase precu 97.8 0.00054 1.8E-08 68.0 16.5 194 117-341 220-448 (656)
24 2zwa_A Leucine carboxyl methyl 97.8 0.00037 1.3E-08 69.7 14.8 170 178-361 410-615 (695)
25 2ast_B S-phase kinase-associat 97.6 2.1E-05 7.2E-10 71.1 3.0 40 3-42 9-48 (336)
26 2p1m_B Transport inhibitor res 97.2 0.00013 4.5E-09 71.3 2.4 34 3-36 6-40 (594)
27 3ogk_B Coronatine-insensitive 96.8 0.00038 1.3E-08 68.0 2.4 33 4-36 14-47 (592)
28 2z2n_A Virginiamycin B lyase; 94.9 1.6 5.5E-05 37.2 19.1 190 103-338 106-299 (299)
29 3jrp_A Fusion protein of prote 94.6 2.3 7.7E-05 37.6 18.4 65 269-335 171-241 (379)
30 3jro_A Fusion protein of prote 93.5 3.9 0.00013 40.8 18.1 65 269-335 169-239 (753)
31 3dsm_A Uncharacterized protein 92.1 5.8 0.0002 34.8 24.1 199 106-342 2-221 (328)
32 3hfq_A Uncharacterized protein 90.4 8.5 0.00029 33.6 16.2 115 215-340 50-178 (347)
33 3e5z_A Putative gluconolactona 90.2 7.9 0.00027 33.0 20.5 200 103-342 36-254 (296)
34 3g4e_A Regucalcin; six bladed 89.2 9.9 0.00034 32.6 18.6 200 103-343 21-239 (297)
35 3hfq_A Uncharacterized protein 88.6 12 0.0004 32.7 25.0 72 268-341 249-326 (347)
36 1q7f_A NHL, brain tumor CG1071 88.1 11 0.00038 31.8 21.7 190 104-334 86-280 (286)
37 3scy_A Hypothetical bacterial 87.6 11 0.00038 33.1 13.6 118 215-341 221-346 (361)
38 3dsm_A Uncharacterized protein 86.0 17 0.00058 31.7 21.1 192 105-338 52-257 (328)
39 4gqb_B Methylosome protein 50; 85.7 18 0.00062 31.9 17.0 197 104-339 91-294 (344)
40 3hrp_A Uncharacterized protein 83.2 16 0.00054 33.3 12.6 110 214-340 140-255 (409)
41 3q7m_A Lipoprotein YFGL, BAMB; 83.1 24 0.00083 31.1 15.2 110 209-340 97-213 (376)
42 4e54_B DNA damage-binding prot 82.8 22 0.00074 32.3 13.5 193 105-337 130-330 (435)
43 3ei3_B DNA damage-binding prot 81.6 27 0.00093 30.7 19.0 193 108-337 88-285 (383)
44 3mbr_X Glutamine cyclotransfer 80.6 25 0.00084 29.6 13.9 112 213-342 28-142 (243)
45 2qc5_A Streptogramin B lactona 79.6 26 0.00089 29.3 18.5 185 104-333 112-299 (300)
46 4gga_A P55CDC, cell division c 79.4 35 0.0012 30.7 21.1 197 104-340 114-316 (420)
47 3nol_A Glutamine cyclotransfer 78.5 30 0.001 29.4 12.6 112 213-342 50-164 (262)
48 1rwi_B Serine/threonine-protei 78.2 27 0.00094 28.8 17.0 184 105-336 76-266 (270)
49 4g56_B MGC81050 protein; prote 77.9 36 0.0012 29.9 16.9 197 104-339 103-306 (357)
50 2dg1_A DRP35, lactonase; beta 77.5 34 0.0012 29.4 12.6 113 215-340 55-177 (333)
51 3v9f_A Two-component system se 76.2 64 0.0022 32.0 20.4 196 106-341 417-618 (781)
52 3dwl_C Actin-related protein 2 75.6 39 0.0013 29.5 12.5 185 114-337 31-239 (377)
53 3q7m_A Lipoprotein YFGL, BAMB; 74.8 44 0.0015 29.4 22.1 112 103-240 50-164 (376)
54 3no2_A Uncharacterized protein 74.3 39 0.0013 28.6 16.4 189 108-339 7-200 (276)
55 2z2n_A Virginiamycin B lyase; 73.7 38 0.0013 28.2 21.9 194 103-342 64-262 (299)
56 3e5z_A Putative gluconolactona 73.7 40 0.0014 28.4 18.8 201 103-339 76-291 (296)
57 1q7f_A NHL, brain tumor CG1071 73.1 40 0.0014 28.1 21.2 203 103-342 37-246 (286)
58 2ojh_A Uncharacterized protein 72.8 38 0.0013 27.8 20.5 201 103-341 49-265 (297)
59 2qc5_A Streptogramin B lactona 72.7 40 0.0014 28.0 21.1 194 101-341 24-224 (300)
60 1ri6_A Putative isomerase YBHE 71.3 47 0.0016 28.2 20.7 70 269-341 241-317 (343)
61 2ad6_A Methanol dehydrogenase 71.1 71 0.0024 30.5 13.7 114 209-339 56-190 (571)
62 2aq5_A Coronin-1A; WD40 repeat 71.1 55 0.0019 29.0 17.1 199 108-343 146-351 (402)
63 3g4e_A Regucalcin; six bladed 70.3 49 0.0017 28.0 13.2 101 215-335 24-140 (297)
64 1ri6_A Putative isomerase YBHE 69.2 52 0.0018 27.9 17.2 138 181-338 61-215 (343)
65 3bws_A Protein LP49; two-domai 68.9 63 0.0022 28.7 13.5 113 215-339 133-248 (433)
66 1kv9_A Type II quinohemoprotei 68.8 59 0.002 31.7 12.8 114 209-340 60-193 (668)
67 4a2l_A BT_4663, two-component 68.5 96 0.0033 30.7 22.6 187 118-337 332-529 (795)
68 3tc9_A Hypothetical hydrolase; 66.6 67 0.0023 29.3 12.1 110 215-339 149-262 (430)
69 1k8k_C P40, ARP2/3 complex 41 66.6 37 0.0013 29.4 10.0 69 269-339 19-88 (372)
70 3jrp_A Fusion protein of prote 65.8 65 0.0022 27.7 19.4 69 270-341 221-295 (379)
71 1rwi_B Serine/threonine-protei 65.0 56 0.0019 26.7 15.9 190 103-339 31-227 (270)
72 4e54_B DNA damage-binding prot 64.5 81 0.0028 28.4 18.0 55 281-338 377-434 (435)
73 2fp8_A Strictosidine synthase; 63.7 70 0.0024 27.4 11.2 112 215-340 29-180 (322)
74 3sjl_D Methylamine dehydrogena 63.3 86 0.003 28.3 12.1 121 215-345 237-375 (386)
75 4hw6_A Hypothetical protein, I 63.2 46 0.0016 30.5 10.2 114 209-337 141-262 (433)
76 1l0q_A Surface layer protein; 63.1 77 0.0026 27.6 20.7 185 108-339 3-194 (391)
77 3u4y_A Uncharacterized protein 61.8 74 0.0025 27.0 17.4 185 117-341 109-311 (331)
78 3dr2_A Exported gluconolactona 60.8 77 0.0026 26.9 17.2 104 228-343 168-276 (305)
79 3dwl_C Actin-related protein 2 60.8 22 0.00076 31.1 7.4 138 181-335 34-178 (377)
80 2ghs_A AGR_C_1268P; regucalcin 60.7 82 0.0028 27.1 12.1 104 215-340 60-174 (326)
81 3scy_A Hypothetical bacterial 60.6 83 0.0028 27.2 19.0 193 118-341 31-249 (361)
82 2p4o_A Hypothetical protein; p 60.5 79 0.0027 26.9 12.5 105 215-336 42-149 (306)
83 2hqs_A Protein TOLB; TOLB, PAL 60.1 97 0.0033 27.8 20.8 184 116-340 159-350 (415)
84 1pjx_A Dfpase, DIISOPROPYLFLUO 59.5 78 0.0027 26.5 20.4 203 105-341 27-264 (314)
85 1kb0_A Quinohemoprotein alcoho 59.5 74 0.0025 31.1 11.5 113 209-339 71-204 (677)
86 3vgz_A Uncharacterized protein 59.1 84 0.0029 26.8 22.6 206 103-339 97-308 (353)
87 1evh_A WH1 domain, protein (ME 58.5 18 0.00063 26.3 5.2 41 117-166 12-52 (112)
88 2z3z_A Dipeptidyl aminopeptida 57.8 1.4E+02 0.0047 28.8 21.5 189 117-336 236-437 (706)
89 3v9f_A Two-component system se 57.0 1.5E+02 0.0053 29.1 22.0 201 104-341 321-531 (781)
90 3mmy_A MRNA export factor; mRN 56.5 93 0.0032 26.5 19.1 29 310-338 279-308 (368)
91 4aez_A CDC20, WD repeat-contai 56.2 1.1E+02 0.0036 27.1 21.7 101 228-339 283-385 (401)
92 2hqs_A Protein TOLB; TOLB, PAL 56.1 1.1E+02 0.0039 27.3 21.3 184 117-342 204-395 (415)
93 2ecf_A Dipeptidyl peptidase IV 56.0 1.5E+02 0.0051 28.7 17.0 188 117-335 264-460 (741)
94 1yiq_A Quinohemoprotein alcoho 55.8 1.3E+02 0.0046 29.3 12.7 114 209-340 64-198 (689)
95 1flg_A Protein (quinoprotein e 55.6 1.4E+02 0.0049 28.4 12.9 117 209-340 62-199 (582)
96 2iwa_A Glutamine cyclotransfer 54.5 1E+02 0.0034 26.2 14.7 110 216-342 32-144 (266)
97 4a2l_A BT_4663, two-component 53.5 1.8E+02 0.006 28.8 22.8 208 103-341 270-487 (795)
98 3iuj_A Prolyl endopeptidase; h 53.3 1.7E+02 0.0057 28.4 17.7 113 214-341 290-412 (693)
99 1nir_A Nitrite reductase; hemo 52.7 97 0.0033 29.2 10.8 114 215-338 334-462 (543)
100 1nir_A Nitrite reductase; hemo 52.5 1.5E+02 0.0053 27.8 19.8 194 105-339 147-360 (543)
101 3u4y_A Uncharacterized protein 52.3 1.1E+02 0.0036 25.9 21.6 187 107-337 10-210 (331)
102 2mad_H Methylamine dehydrogena 52.0 1.3E+02 0.0044 26.7 13.2 70 269-339 278-355 (373)
103 2fp8_A Strictosidine synthase; 51.9 1.1E+02 0.0038 26.0 16.4 200 109-343 33-278 (322)
104 3nok_A Glutaminyl cyclase; bet 49.8 1.2E+02 0.0041 25.8 11.4 108 214-342 63-173 (268)
105 3bg1_A Protein SEC13 homolog; 49.4 1.2E+02 0.0041 25.7 15.9 55 280-334 187-247 (316)
106 2bkl_A Prolyl endopeptidase; m 48.8 1.9E+02 0.0066 27.9 22.6 189 118-341 204-404 (695)
107 1egx_A VAsp, vasodilator-stimu 48.4 32 0.0011 25.1 5.1 42 118-167 13-54 (115)
108 2dg1_A DRP35, lactonase; beta 48.4 1.3E+02 0.0043 25.6 18.9 205 104-342 53-271 (333)
109 3fm0_A Protein CIAO1; WDR39,SG 47.8 1.4E+02 0.0046 25.8 19.2 62 269-332 161-223 (345)
110 1l0q_A Surface layer protein; 47.0 1.4E+02 0.0049 25.8 20.5 189 106-339 85-280 (391)
111 4aez_A CDC20, WD repeat-contai 46.7 1.5E+02 0.0052 26.0 22.9 190 106-339 103-298 (401)
112 3v65_B Low-density lipoprotein 46.3 1.6E+02 0.0054 26.2 22.0 104 106-241 87-193 (386)
113 3jro_A Fusion protein of prote 46.1 2E+02 0.0068 28.2 12.3 64 270-335 67-133 (753)
114 1k8k_C P40, ARP2/3 complex 41 45.7 1.4E+02 0.0048 25.4 21.5 68 269-338 153-237 (372)
115 2pm9_A Protein WEB1, protein t 42.7 1.7E+02 0.0058 25.5 16.9 64 269-336 274-339 (416)
116 3dr2_A Exported gluconolactona 41.0 88 0.003 26.5 7.8 110 215-341 55-185 (305)
117 1n7d_A LDL receptor, low-densi 39.9 2.8E+02 0.0095 27.1 12.1 109 215-339 507-619 (699)
118 1qks_A Cytochrome CD1 nitrite 39.5 2.5E+02 0.0087 26.6 20.8 194 106-339 166-378 (567)
119 3mmy_A MRNA export factor; mRN 39.0 1.8E+02 0.006 24.6 13.2 70 270-341 54-124 (368)
120 2jp2_A Spred-2, sprouty-relate 37.9 63 0.0022 24.0 5.4 41 118-166 22-65 (126)
121 1pby_B Quinohemoprotein amine 37.8 1.8E+02 0.0061 24.3 15.3 191 104-339 90-315 (337)
122 2kwv_A RAD30 homolog B, DNA po 37.7 16 0.00053 21.7 1.5 15 4-18 22-36 (48)
123 3fvz_A Peptidyl-glycine alpha- 37.5 1.9E+02 0.0066 24.6 16.1 162 106-290 154-321 (329)
124 1w6s_A Methanol dehydrogenase 36.3 2.9E+02 0.01 26.4 12.2 115 209-340 56-197 (599)
125 3m0c_C LDL receptor, low-densi 34.8 3.6E+02 0.012 26.9 24.6 173 149-356 474-656 (791)
126 2ece_A 462AA long hypothetical 34.7 2.8E+02 0.0095 25.7 10.3 100 228-333 227-351 (462)
127 1yr2_A Prolyl oligopeptidase; 34.3 3.3E+02 0.011 26.4 21.5 141 180-340 294-447 (741)
128 2aq5_A Coronin-1A; WD40 repeat 34.0 2.4E+02 0.0081 24.6 20.0 205 106-341 93-308 (402)
129 3v64_C Agrin; beta propeller, 33.9 2.4E+02 0.0081 24.6 21.7 184 106-338 44-238 (349)
130 1gxr_A ESG1, transducin-like e 33.4 2.1E+02 0.0071 23.8 24.0 190 104-339 106-301 (337)
131 1npe_A Nidogen, entactin; glyc 33.3 2E+02 0.0068 23.5 22.0 194 103-342 44-247 (267)
132 1yfq_A Cell cycle arrest prote 33.1 2.2E+02 0.0074 23.9 9.6 70 269-341 22-96 (342)
133 2hz6_A Endoplasmic reticulum t 32.8 15 0.00053 32.8 1.5 113 207-339 1-116 (369)
134 1jmx_B Amine dehydrogenase; ox 32.8 2.2E+02 0.0075 23.9 11.0 107 215-335 10-135 (349)
135 3k26_A Polycomb protein EED; W 32.6 2.2E+02 0.0077 23.9 19.9 63 270-334 299-366 (366)
136 2oiz_A Aromatic amine dehydrog 31.9 2E+02 0.0067 25.1 8.8 70 270-341 266-341 (361)
137 1ddw_A GLGF-domain protein hom 31.1 1.1E+02 0.0038 22.4 5.7 39 117-166 12-51 (120)
138 4gga_A P55CDC, cell division c 30.3 2.8E+02 0.0097 24.4 11.3 59 281-339 124-183 (420)
139 1xod_A Spred1; sprouty, EVH1, 30.3 61 0.0021 23.8 4.1 41 118-166 13-56 (118)
140 2be1_A Serine/threonine-protei 30.2 2.1E+02 0.0073 25.1 8.5 114 106-241 10-133 (339)
141 2dk7_A Transcription elongatio 30.1 50 0.0017 21.9 3.2 21 317-337 22-42 (73)
142 2ghs_A AGR_C_1268P; regucalcin 29.8 2.6E+02 0.0089 23.8 18.7 199 103-343 57-269 (326)
143 1yfq_A Cell cycle arrest prote 29.2 2.5E+02 0.0086 23.4 19.6 189 108-338 71-286 (342)
144 3bws_A Protein LP49; two-domai 29.0 2.9E+02 0.01 24.1 21.4 192 103-339 177-395 (433)
145 3fm0_A Protein CIAO1; WDR39,SG 28.9 2.7E+02 0.0093 23.7 18.6 68 269-338 116-185 (345)
146 1got_B GT-beta; complex (GTP-b 28.1 2.8E+02 0.0095 23.6 10.4 68 269-338 108-177 (340)
147 3azo_A Aminopeptidase; POP fam 28.0 3.9E+02 0.013 25.2 22.2 195 117-341 162-376 (662)
148 3sre_A PON1, serum paraoxonase 27.6 3.2E+02 0.011 24.1 12.9 63 271-333 128-211 (355)
149 3qqz_A Putative uncharacterize 27.3 2.7E+02 0.0093 23.2 18.4 167 148-343 29-213 (255)
150 2ojh_A Uncharacterized protein 26.1 2.5E+02 0.0087 22.5 19.4 182 116-340 22-212 (297)
151 4a11_B DNA excision repair pro 25.9 3.1E+02 0.011 23.4 20.0 56 281-338 313-369 (408)
152 4ggc_A P55CDC, cell division c 25.1 2.8E+02 0.0097 22.7 21.2 68 103-191 33-100 (318)
153 3ow8_A WD repeat-containing pr 24.8 3.2E+02 0.011 23.1 11.0 59 280-338 56-115 (321)
154 2hes_X YDR267CP; beta-propelle 24.4 3.2E+02 0.011 23.0 11.2 61 280-340 127-190 (330)
155 3mkq_A Coatomer beta'-subunit; 24.4 4.9E+02 0.017 25.2 24.0 192 104-339 65-264 (814)
156 2xzh_A Clathrin heavy chain 1; 24.3 1.8E+02 0.0061 25.9 6.7 39 308-346 261-303 (365)
157 3vgz_A Uncharacterized protein 23.4 3.3E+02 0.011 22.8 21.5 184 116-339 69-267 (353)
158 1n7d_A LDL receptor, low-densi 21.3 5.2E+02 0.018 25.1 10.3 31 213-246 592-623 (699)
159 2z3z_A Dipeptidyl aminopeptida 20.2 5.6E+02 0.019 24.3 23.0 106 228-340 234-350 (706)
160 1i2h_A PSD-ZIP45(homer-1C/VESL 20.2 1.9E+02 0.0066 22.6 5.5 38 118-166 18-56 (168)
No 1
>2e31_A FBS1, F-box only protein 2; ubiquitin, SCF, ubiquitin ligase, FBS1; 2.40A {Mus musculus} PDB: 2e32_A
Probab=99.19 E-value=1.1e-11 Score=109.27 Aligned_cols=48 Identities=21% Similarity=0.510 Sum_probs=46.1
Q ss_pred ccCCcHHHHHHHHhcCChhhhh-hheechhhhhhhcCChHHHHHHHhhc
Q 039662 3 VKYLSDDMMIETLSRLPVKSLM-RFQCVCKSWYDLVKDPNFIYKHLKRD 50 (366)
Q Consensus 3 ~~~LP~Dll~eIL~rLP~~sl~-r~~~VcK~W~~li~~~~F~~~~~~~~ 50 (366)
+..||+||+.+||+|||+++|+ ||++|||+|+++++++.|.+.+..+.
T Consensus 51 ~~~LP~ell~~Il~~Lp~~~L~~r~~~VCk~Wr~l~~~~~~w~~~~~~~ 99 (297)
T 2e31_A 51 LAELPEPLLLRVLAELPATELVQACRLVCLRWKELVDGAPLWLLKCQQE 99 (297)
T ss_dssp TTSSCHHHHHHHHHTSCHHHHHHTGGGTCHHHHHHHTSHHHHHHHHHHT
T ss_pred hhhCCHHHHHHHHHcCCHHHHHHHHHHHhHHHHHHhcChHHHHHHhhcc
Confidence 6899999999999999999999 99999999999999999999998876
No 2
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=99.17 E-value=7.7e-09 Score=92.88 Aligned_cols=208 Identities=10% Similarity=0.001 Sum_probs=132.3
Q ss_pred EeeecceEEEeec-----CCeEEEEeCCCcceeecCCCCCCCCCcccccceeeEEeecCCCCCeEEEEEEeeecccCCCC
Q 039662 102 IGPYDGIFCLLKS-----HTLINLWNVSLNEYRVIPECRPRLPLYTKTHYANVALGLDPVTKDFKLVLILTLWNDHRDSF 176 (366)
Q Consensus 102 i~s~~GLl~~~~~-----~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~ 176 (366)
.+..+|.|.+..+ ...+.++||.|++|..+|+.+..+ .. ..+..++. +++.+.. .....
T Consensus 51 ~~~~~~~lyv~GG~~~~~~~~~~~~d~~~~~W~~~~~~p~~r-----~~--~~~~~~~~-----~iyv~GG----~~~~~ 114 (306)
T 3ii7_A 51 CVFWDNVVYILGGSQLFPIKRMDCYNVVKDSWYSKLGPPTPR-----DS--LAACAAEG-----KIYTSGG----SEVGN 114 (306)
T ss_dssp EEEETTEEEEECCBSSSBCCEEEEEETTTTEEEEEECCSSCC-----BS--CEEEEETT-----EEEEECC----BBTTB
T ss_pred EEEECCEEEEEeCCCCCCcceEEEEeCCCCeEEECCCCCccc-----cc--eeEEEECC-----EEEEECC----CCCCC
Confidence 3455666655443 235999999999999998876532 11 12222321 5666654 11122
Q ss_pred CCcceEEEEEcCCCceeecCCCccccceeecccceEEECceEEEEEecCCC------ceEEEEEeCCCceeeEeC-CCCC
Q 039662 177 HDFSHVAVYKFSTNSWRDLEGFEMRYDYMVDRIFNVYLNGFCYWVVCRPDY------SKAILSFSMSDEVFEEME-GPSV 249 (366)
Q Consensus 177 ~~~~~~~vyss~~~~W~~~~~~~~~~~~~~~~~~~v~~~G~lywl~~~~~~------~~~Il~fD~~~~~~~~i~-~P~~ 249 (366)
.....+++|+..+++|+.++.++.+. .....+.++|.+|.++..... ...+..||+.+++|+.++ +|..
T Consensus 115 ~~~~~~~~~d~~~~~W~~~~~~p~~r----~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~ 190 (306)
T 3ii7_A 115 SALYLFECYDTRTESWHTKPSMLTQR----CSHGMVEANGLIYVCGGSLGNNVSGRVLNSCEVYDPATETWTELCPMIEA 190 (306)
T ss_dssp SCCCCEEEEETTTTEEEEECCCSSCC----BSCEEEEETTEEEEECCEESCTTTCEECCCEEEEETTTTEEEEECCCSSC
T ss_pred cEeeeEEEEeCCCCceEeCCCCcCCc----ceeEEEEECCEEEEECCCCCCCCcccccceEEEeCCCCCeEEECCCccch
Confidence 23458899999999999996443322 234567789999999743211 346999999999999884 4432
Q ss_pred CCCCCccccccccceeeEecCeEEEEEeC-CCCCEEEEEEee-C-CeeeEEEEecCCCcceeeEEEeeCCeEEEEEc---
Q 039662 250 PQSTTYYQSVKTPWMLGTYDDCLSLLYSD-SFAHTFELWTMT-G-GNWTKHSTFGPFIETYQPIGFWRKGEFFLESS--- 323 (366)
Q Consensus 250 ~~~~~~~~~l~~~~~~~~~~G~L~~~~~~-~~~~~~~IW~l~-~-~~W~~~~~i~~~~~~~~~~~~~~~g~i~~~~~--- 323 (366)
. ..... +..+|+|+++... .....-++|+++ . ..|+.+..++.. ...+... .-++.|++...
T Consensus 191 r----~~~~~------~~~~~~i~v~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~-r~~~~~~-~~~~~i~v~GG~~~ 258 (306)
T 3ii7_A 191 R----KNHGL------VFVKDKIFAVGGQNGLGGLDNVEYYDIKLNEWKMVSPMPWK-GVTVKCA-AVGSIVYVLAGFQG 258 (306)
T ss_dssp C----BSCEE------EEETTEEEEECCEETTEEBCCEEEEETTTTEEEECCCCSCC-BSCCEEE-EETTEEEEEECBCS
T ss_pred h----hcceE------EEECCEEEEEeCCCCCCCCceEEEeeCCCCcEEECCCCCCC-ccceeEE-EECCEEEEEeCcCC
Confidence 2 12344 7779999988421 122234688888 4 889987544432 1122222 23677777643
Q ss_pred ---CCeEEEEECCCCeEEEEE
Q 039662 324 ---DKRVVLYDSTYQEMRDIR 341 (366)
Q Consensus 324 ---~~~~~~yd~~~~~~~~i~ 341 (366)
...+..||+++++|+.+.
T Consensus 259 ~~~~~~~~~yd~~~~~W~~~~ 279 (306)
T 3ii7_A 259 VGRLGHILEYNTETDKWVANS 279 (306)
T ss_dssp SSBCCEEEEEETTTTEEEEEE
T ss_pred CeeeeeEEEEcCCCCeEEeCC
Confidence 257999999999999986
No 3
>1fs1_A SKP2 F-BOX, cyclin A/CDK2-associated P19; F-BOX, LRR, leucine-rich repeat, SCF, ubiquitin, ubiquitin protein ligase; 1.80A {Homo sapiens} SCOP: a.158.1.1 PDB: 1ldk_E
Probab=99.16 E-value=1.6e-11 Score=79.91 Aligned_cols=42 Identities=29% Similarity=0.590 Sum_probs=39.2
Q ss_pred ccCCcHHHHHHHHhcCChhhhhhheechhhhhhhcCChHHHH
Q 039662 3 VKYLSDDMMIETLSRLPVKSLMRFQCVCKSWYDLVKDPNFIY 44 (366)
Q Consensus 3 ~~~LP~Dll~eIL~rLP~~sl~r~~~VcK~W~~li~~~~F~~ 44 (366)
+..||+|++.+||++||++++.++++|||+|++++.++.|-+
T Consensus 9 ~~~LP~eil~~I~~~L~~~dl~~~~~Vck~w~~~~~~~~lW~ 50 (53)
T 1fs1_A 9 WDSLPDELLLGIFSCLCLPELLKVSGVCKRWYRLASDESLWQ 50 (53)
T ss_dssp CCSSCHHHHHHHHTTSCGGGHHHHHTTCHHHHHHHTCGGGC-
T ss_pred HHHCCHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhCChHHHH
Confidence 689999999999999999999999999999999999998754
No 4
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=99.14 E-value=1.4e-08 Score=91.70 Aligned_cols=194 Identities=7% Similarity=-0.007 Sum_probs=124.2
Q ss_pred EEEEeCCCcceeecCCCCCCCCCcccccceeeEEeecCCCCCeEEEEEEeeecccCCCCCCcceEEEEEcCCCceeecCC
Q 039662 118 INLWNVSLNEYRVIPECRPRLPLYTKTHYANVALGLDPVTKDFKLVLILTLWNDHRDSFHDFSHVAVYKFSTNSWRDLEG 197 (366)
Q Consensus 118 ~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~~vyss~~~~W~~~~~ 197 (366)
++++||.|++|..+|+.+..+ .. ..+..++. +++.+.... ..+.......+++|+..+++|+.++.
T Consensus 69 ~~~~d~~~~~W~~~~~~p~~r------~~-~~~~~~~~-----~lyv~GG~~--~~~~~~~~~~~~~~d~~~~~W~~~~~ 134 (315)
T 4asc_A 69 FLQFDHLDSEWLGMPPLPSPR------CL-FGLGEALN-----SIYVVGGRE--IKDGERCLDSVMCYDRLSFKWGESDP 134 (315)
T ss_dssp EEEEETTTTEEEECCCBSSCE------ES-CEEEEETT-----EEEEECCEE--SSTTCCBCCCEEEEETTTTEEEECCC
T ss_pred eEEecCCCCeEEECCCCCcch------hc-eeEEEECC-----EEEEEeCCc--CCCCCcccceEEEECCCCCcEeECCC
Confidence 889999999999998876421 11 12222221 566665411 00112344588999999999999964
Q ss_pred CccccceeecccceEEECceEEEEEecCCC---ceEEEEEeCCCceeeEeC-CCCCCCCCCccccccccceeeEecCeEE
Q 039662 198 FEMRYDYMVDRIFNVYLNGFCYWVVCRPDY---SKAILSFSMSDEVFEEME-GPSVPQSTTYYQSVKTPWMLGTYDDCLS 273 (366)
Q Consensus 198 ~~~~~~~~~~~~~~v~~~G~lywl~~~~~~---~~~Il~fD~~~~~~~~i~-~P~~~~~~~~~~~l~~~~~~~~~~G~L~ 273 (366)
++.+. .....+.++|.+|.++....+ ...+..||+.+++|+.++ +|... ..... +..+|+|+
T Consensus 135 ~p~~r----~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r----~~~~~------~~~~~~iy 200 (315)
T 4asc_A 135 LPYVV----YGHTVLSHMDLVYVIGGKGSDRKCLNKMCVYDPKKFEWKELAPMQTAR----SLFGA------TVHDGRII 200 (315)
T ss_dssp CSSCC----BSCEEEEETTEEEEECCBCTTSCBCCCEEEEETTTTEEEECCCCSSCC----BSCEE------EEETTEEE
T ss_pred CCCcc----cceeEEEECCEEEEEeCCCCCCcccceEEEEeCCCCeEEECCCCCCch----hceEE------EEECCEEE
Confidence 33322 235667799999999854121 346999999999999874 44322 12344 77899999
Q ss_pred EEEeCC-CCCEEEEEEee-C-CeeeEEEEecCCCcceeeEEEeeCCeEEEEEcC---------------CeEEEEECCCC
Q 039662 274 LLYSDS-FAHTFELWTMT-G-GNWTKHSTFGPFIETYQPIGFWRKGEFFLESSD---------------KRVVLYDSTYQ 335 (366)
Q Consensus 274 ~~~~~~-~~~~~~IW~l~-~-~~W~~~~~i~~~~~~~~~~~~~~~g~i~~~~~~---------------~~~~~yd~~~~ 335 (366)
++.... ....-++|+++ + ..|+.+..++... ..+... .-++.|++.... ..+..||++++
T Consensus 201 v~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r-~~~~~~-~~~~~l~v~GG~~~~~~~~~~~~~~~~~~v~~yd~~~~ 278 (315)
T 4asc_A 201 VAAGVTDTGLTSSAEVYSITDNKWAPFEAFPQER-SSLSLV-SLVGTLYAIGGFATLETESGELVPTELNDIWRYNEEEK 278 (315)
T ss_dssp EEEEECSSSEEEEEEEEETTTTEEEEECCCSSCC-BSCEEE-EETTEEEEEEEEEEEECTTSCEEEEEEEEEEEEETTTT
T ss_pred EEeccCCCCccceEEEEECCCCeEEECCCCCCcc-cceeEE-EECCEEEEECCccccCcCCccccccccCcEEEecCCCC
Confidence 995422 22344889998 4 8999886544321 122222 335677665321 35789999999
Q ss_pred eEEEEE
Q 039662 336 EMRDIR 341 (366)
Q Consensus 336 ~~~~i~ 341 (366)
+|+.+.
T Consensus 279 ~W~~~~ 284 (315)
T 4asc_A 279 KWEGVL 284 (315)
T ss_dssp EEEEEE
T ss_pred hhhhhc
Confidence 999983
No 5
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=99.13 E-value=6.2e-08 Score=87.08 Aligned_cols=192 Identities=10% Similarity=0.056 Sum_probs=123.8
Q ss_pred eEEEEeCCCcceeecCCCCCCCCCcccccceeeEEeecCCCCCeEEEEEEeeecccCCCCCCcceEEEEEcCCCceeecC
Q 039662 117 LINLWNVSLNEYRVIPECRPRLPLYTKTHYANVALGLDPVTKDFKLVLILTLWNDHRDSFHDFSHVAVYKFSTNSWRDLE 196 (366)
Q Consensus 117 ~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~~vyss~~~~W~~~~ 196 (366)
.+.++||.|++|..+|+.+..+ .. ..+..++. +++.+... +.......+++|+..+++|+.+.
T Consensus 91 ~~~~~d~~~~~W~~~~~~p~~r-----~~--~~~~~~~~-----~iyv~GG~-----~~~~~~~~~~~yd~~~~~W~~~~ 153 (308)
T 1zgk_A 91 ALDCYNPMTNQWSPCAPMSVPR-----NR--IGVGVIDG-----HIYAVGGS-----HGCIHHNSVERYEPERDEWHLVA 153 (308)
T ss_dssp CEEEEETTTTEEEECCCCSSCC-----BT--CEEEEETT-----EEEEECCE-----ETTEECCCEEEEETTTTEEEECC
T ss_pred eEEEECCCCCeEeECCCCCcCc-----cc--cEEEEECC-----EEEEEcCC-----CCCcccccEEEECCCCCeEeECC
Confidence 4999999999999999776532 11 12222221 56666431 11112347899999999999996
Q ss_pred CCccccceeecccceEEECceEEEEEecCCC--ceEEEEEeCCCceeeEeC-CCCCCCCCCccccccccceeeEecCeEE
Q 039662 197 GFEMRYDYMVDRIFNVYLNGFCYWVVCRPDY--SKAILSFSMSDEVFEEME-GPSVPQSTTYYQSVKTPWMLGTYDDCLS 273 (366)
Q Consensus 197 ~~~~~~~~~~~~~~~v~~~G~lywl~~~~~~--~~~Il~fD~~~~~~~~i~-~P~~~~~~~~~~~l~~~~~~~~~~G~L~ 273 (366)
.++.+. .....+.++|.+|.++..... ...+..||+.+++|+.+. +|... ..... +..+|+|+
T Consensus 154 ~~p~~r----~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r----~~~~~------~~~~~~iy 219 (308)
T 1zgk_A 154 PMLTRR----IGVGVAVLNRLLYAVGGFDGTNRLNSAECYYPERNEWRMITAMNTIR----SGAGV------CVLHNCIY 219 (308)
T ss_dssp CCSSCC----BSCEEEEETTEEEEECCBCSSCBCCCEEEEETTTTEEEECCCCSSCC----BSCEE------EEETTEEE
T ss_pred CCCccc----cceEEEEECCEEEEEeCCCCCCcCceEEEEeCCCCeEeeCCCCCCcc----ccceE------EEECCEEE
Confidence 433221 234567789999999743221 346999999999999874 33322 12344 77799999
Q ss_pred EEEeC-CCCCEEEEEEee--CCeeeEEEEecCCCcceeeEEEeeCCeEEEEEc------CCeEEEEECCCCeEEEEE
Q 039662 274 LLYSD-SFAHTFELWTMT--GGNWTKHSTFGPFIETYQPIGFWRKGEFFLESS------DKRVVLYDSTYQEMRDIR 341 (366)
Q Consensus 274 ~~~~~-~~~~~~~IW~l~--~~~W~~~~~i~~~~~~~~~~~~~~~g~i~~~~~------~~~~~~yd~~~~~~~~i~ 341 (366)
++... .....-++|+++ ...|+++..++... ...-. +.-++.|++... ...+..||+++++|+.+.
T Consensus 220 v~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r-~~~~~-~~~~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~~ 294 (308)
T 1zgk_A 220 AAGGYDGQDQLNSVERYDVETETWTFVAPMKHRR-SALGI-TVHQGRIYVLGGYDGHTFLDSVECYDPDTDTWSEVT 294 (308)
T ss_dssp EECCBCSSSBCCCEEEEETTTTEEEECCCCSSCC-BSCEE-EEETTEEEEECCBCSSCBCCEEEEEETTTTEEEEEE
T ss_pred EEeCCCCCCccceEEEEeCCCCcEEECCCCCCCc-cceEE-EEECCEEEEEcCcCCCcccceEEEEcCCCCEEeecC
Confidence 98532 222345788888 48999876444321 11222 223677877643 356899999999999985
No 6
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=99.11 E-value=2.7e-08 Score=88.99 Aligned_cols=207 Identities=11% Similarity=0.128 Sum_probs=130.9
Q ss_pred EeeecceEEEeec------CCeEEEEeCCCcc---eeecCCCCCCCCCcccccceeeEEeecCCCCCeEEEEEEeeeccc
Q 039662 102 IGPYDGIFCLLKS------HTLINLWNVSLNE---YRVIPECRPRLPLYTKTHYANVALGLDPVTKDFKLVLILTLWNDH 172 (366)
Q Consensus 102 i~s~~GLl~~~~~------~~~~~V~NP~T~~---~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~ 172 (366)
.+..+|.|.+..+ ...++++||.|++ |..+|+.+..+ .. ..+..++ + +++.+...
T Consensus 58 ~~~~~~~l~v~GG~~~~~~~~~~~~~d~~~~~~~~W~~~~~~p~~r------~~-~~~~~~~----~-~lyv~GG~---- 121 (301)
T 2vpj_A 58 SVSLHDRIYVIGGYDGRSRLSSVECLDYTADEDGVWYSVAPMNVRR------GL-AGATTLG----D-MIYVSGGF---- 121 (301)
T ss_dssp EEEETTEEEEECCBCSSCBCCCEEEEETTCCTTCCCEEECCCSSCC------BS-CEEEEET----T-EEEEECCB----
T ss_pred EEEECCEEEEEcCCCCCccCceEEEEECCCCCCCeeEECCCCCCCc------cc-eeEEEEC----C-EEEEEccc----
Confidence 3455666655432 1249999999999 99998776532 11 1222222 1 56666541
Q ss_pred CCCCCCcceEEEEEcCCCceeecCCCccccceeecccceEEECceEEEEEecCCC--ceEEEEEeCCCceeeEeC-CCCC
Q 039662 173 RDSFHDFSHVAVYKFSTNSWRDLEGFEMRYDYMVDRIFNVYLNGFCYWVVCRPDY--SKAILSFSMSDEVFEEME-GPSV 249 (366)
Q Consensus 173 ~~~~~~~~~~~vyss~~~~W~~~~~~~~~~~~~~~~~~~v~~~G~lywl~~~~~~--~~~Il~fD~~~~~~~~i~-~P~~ 249 (366)
+.......+++|+..+++|+.++.++.+ ......+.++|.+|.++..... ...+..||+.+++|+.+. +|..
T Consensus 122 -~~~~~~~~~~~~d~~~~~W~~~~~~p~~----r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~ 196 (301)
T 2vpj_A 122 -DGSRRHTSMERYDPNIDQWSMLGDMQTA----REGAGLVVASGVIYCLGGYDGLNILNSVEKYDPHTGHWTNVTPMATK 196 (301)
T ss_dssp -CSSCBCCEEEEEETTTTEEEEEEECSSC----CBSCEEEEETTEEEEECCBCSSCBCCCEEEEETTTTEEEEECCCSSC
T ss_pred -CCCcccceEEEEcCCCCeEEECCCCCCC----cccceEEEECCEEEEECCCCCCcccceEEEEeCCCCcEEeCCCCCcc
Confidence 1112345789999999999998533322 1235567789999999743221 346999999999999884 4432
Q ss_pred CCCCCccccccccceeeEecCeEEEEEeCC-CCCEEEEEEee--CCeeeEEEEecCCCcceeeEEEeeCCeEEEEEc-C-
Q 039662 250 PQSTTYYQSVKTPWMLGTYDDCLSLLYSDS-FAHTFELWTMT--GGNWTKHSTFGPFIETYQPIGFWRKGEFFLESS-D- 324 (366)
Q Consensus 250 ~~~~~~~~~l~~~~~~~~~~G~L~~~~~~~-~~~~~~IW~l~--~~~W~~~~~i~~~~~~~~~~~~~~~g~i~~~~~-~- 324 (366)
. ..... +..+|+|+++.... ....-++|.++ ..+|+++..++... ..+... .-++.|++... +
T Consensus 197 r----~~~~~------~~~~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r-~~~~~~-~~~~~i~v~GG~~~ 264 (301)
T 2vpj_A 197 R----SGAGV------ALLNDHIYVVGGFDGTAHLSSVEAYNIRTDSWTTVTSMTTPR-CYVGAT-VLRGRLYAIAGYDG 264 (301)
T ss_dssp C----BSCEE------EEETTEEEEECCBCSSSBCCCEEEEETTTTEEEEECCCSSCC-BSCEEE-EETTEEEEECCBCS
T ss_pred c----ccceE------EEECCEEEEEeCCCCCcccceEEEEeCCCCcEEECCCCCCcc-cceeEE-EECCEEEEEcCcCC
Confidence 2 12344 77899999985322 22244678888 48999876544321 222222 33677777643 1
Q ss_pred ----CeEEEEECCCCeEEEEE
Q 039662 325 ----KRVVLYDSTYQEMRDIR 341 (366)
Q Consensus 325 ----~~~~~yd~~~~~~~~i~ 341 (366)
..+..||+++++|+.+.
T Consensus 265 ~~~~~~v~~yd~~~~~W~~~~ 285 (301)
T 2vpj_A 265 NSLLSSIECYDPIIDSWEVVT 285 (301)
T ss_dssp SSBEEEEEEEETTTTEEEEEE
T ss_pred CcccccEEEEcCCCCeEEEcC
Confidence 46899999999999875
No 7
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=99.11 E-value=3.1e-08 Score=88.67 Aligned_cols=207 Identities=12% Similarity=0.118 Sum_probs=131.4
Q ss_pred EeeecceEEEeec------CCeEEEEeCCCcceeecCCCCCCCCCcccccceeeEEeecCCCCCeEEEEEEeeecccCCC
Q 039662 102 IGPYDGIFCLLKS------HTLINLWNVSLNEYRVIPECRPRLPLYTKTHYANVALGLDPVTKDFKLVLILTLWNDHRDS 175 (366)
Q Consensus 102 i~s~~GLl~~~~~------~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~ 175 (366)
.+..+|.|.+..+ ...+.++||.|++|..+|+.+..+ .. ..+..++. +++.+... +.
T Consensus 57 ~~~~~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r------~~-~~~~~~~~-----~iyv~GG~-----~~ 119 (302)
T 2xn4_A 57 MVYMAGLVFAVGGFNGSLRVRTVDSYDPVKDQWTSVANMRDRR------ST-LGAAVLNG-----LLYAVGGF-----DG 119 (302)
T ss_dssp EEEETTEEEEESCBCSSSBCCCEEEEETTTTEEEEECCCSSCC------BS-CEEEEETT-----EEEEEEEE-----CS
T ss_pred EEEECCEEEEEeCcCCCccccceEEECCCCCceeeCCCCCccc------cc-eEEEEECC-----EEEEEcCC-----CC
Confidence 3445666655432 124999999999999999876532 11 12222221 56666541 11
Q ss_pred CCCcceEEEEEcCCCceeecCCCccccceeecccceEEECceEEEEEecCCC----ceEEEEEeCCCceeeEeC-CCCCC
Q 039662 176 FHDFSHVAVYKFSTNSWRDLEGFEMRYDYMVDRIFNVYLNGFCYWVVCRPDY----SKAILSFSMSDEVFEEME-GPSVP 250 (366)
Q Consensus 176 ~~~~~~~~vyss~~~~W~~~~~~~~~~~~~~~~~~~v~~~G~lywl~~~~~~----~~~Il~fD~~~~~~~~i~-~P~~~ 250 (366)
......+++|+..++.|+.++.++.+. .....+.++|.+|.++..... ...+..||+.+++|+.+. +|...
T Consensus 120 ~~~~~~~~~~d~~~~~W~~~~~~p~~r----~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r 195 (302)
T 2xn4_A 120 STGLSSVEAYNIKSNEWFHVAPMNTRR----SSVGVGVVGGLLYAVGGYDVASRQCLSTVECYNATTNEWTYIAEMSTRR 195 (302)
T ss_dssp SCEEEEEEEEETTTTEEEEECCCSSCC----BSCEEEEETTEEEEECCEETTTTEECCCEEEEETTTTEEEEECCCSSCC
T ss_pred CccCceEEEEeCCCCeEeecCCCCCcc----cCceEEEECCEEEEEeCCCCCCCccccEEEEEeCCCCcEEECCCCcccc
Confidence 223457899999999999996433221 234567789999999743211 345999999999999883 44322
Q ss_pred CCCCccccccccceeeEecCeEEEEEeCCC-CCEEEEEEee--CCeeeEEEEecCCCcceeeEEEeeCCeEEEEEc----
Q 039662 251 QSTTYYQSVKTPWMLGTYDDCLSLLYSDSF-AHTFELWTMT--GGNWTKHSTFGPFIETYQPIGFWRKGEFFLESS---- 323 (366)
Q Consensus 251 ~~~~~~~~l~~~~~~~~~~G~L~~~~~~~~-~~~~~IW~l~--~~~W~~~~~i~~~~~~~~~~~~~~~g~i~~~~~---- 323 (366)
....+ +..+|+|+++..... ...-++|.++ ...|+++..++... ..+... .-++.|++...
T Consensus 196 ----~~~~~------~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~r-~~~~~~-~~~~~i~v~GG~~~~ 263 (302)
T 2xn4_A 196 ----SGAGV------GVLNNLLYAVGGHDGPLVRKSVEVYDPTTNAWRQVADMNMCR-RNAGVC-AVNGLLYVVGGDDGS 263 (302)
T ss_dssp ----BSCEE------EEETTEEEEECCBSSSSBCCCEEEEETTTTEEEEECCCSSCC-BSCEEE-EETTEEEEECCBCSS
T ss_pred ----ccccE------EEECCEEEEECCCCCCcccceEEEEeCCCCCEeeCCCCCCcc-ccCeEE-EECCEEEEECCcCCC
Confidence 12344 778999999853222 2234688888 48999876554321 122222 33677877643
Q ss_pred --CCeEEEEECCCCeEEEEE
Q 039662 324 --DKRVVLYDSTYQEMRDIR 341 (366)
Q Consensus 324 --~~~~~~yd~~~~~~~~i~ 341 (366)
-..+..||+++++|+.+.
T Consensus 264 ~~~~~v~~yd~~~~~W~~~~ 283 (302)
T 2xn4_A 264 CNLASVEYYNPTTDKWTVVS 283 (302)
T ss_dssp SBCCCEEEEETTTTEEEECS
T ss_pred cccccEEEEcCCCCeEEECC
Confidence 245999999999999875
No 8
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=99.08 E-value=2.9e-08 Score=89.71 Aligned_cols=192 Identities=9% Similarity=0.113 Sum_probs=123.4
Q ss_pred EEEEeCCCcceeecCCCCCCCCCcccccceeeEEeecCCCCCeEEEEEEeeecccCCCCCCcceEEEEEcCCCceeecCC
Q 039662 118 INLWNVSLNEYRVIPECRPRLPLYTKTHYANVALGLDPVTKDFKLVLILTLWNDHRDSFHDFSHVAVYKFSTNSWRDLEG 197 (366)
Q Consensus 118 ~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~~vyss~~~~W~~~~~ 197 (366)
++++||.|++|..+|+.+..+ .. ..+..++ + +++.+.... .........+++|+..+++|+.++.
T Consensus 80 ~~~~d~~~~~W~~~~~~p~~r------~~-~~~~~~~----~-~iyv~GG~~---~~~~~~~~~~~~yd~~~~~W~~~~~ 144 (318)
T 2woz_A 80 FFQLDNVSSEWVGLPPLPSAR------CL-FGLGEVD----D-KIYVVAGKD---LQTEASLDSVLCYDPVAAKWSEVKN 144 (318)
T ss_dssp EEEEETTTTEEEECSCBSSCB------CS-CEEEEET----T-EEEEEEEEB---TTTCCEEEEEEEEETTTTEEEEECC
T ss_pred EEEEeCCCCcEEECCCCCccc------cc-cceEEEC----C-EEEEEcCcc---CCCCcccceEEEEeCCCCCEeECCC
Confidence 889999999999998776532 11 1122222 1 566665411 0112234578999999999999963
Q ss_pred CccccceeecccceEEECceEEEEEecCC---CceEEEEEeCCCceeeEeC-CCCCCCCCCccccccccceeeEecCeEE
Q 039662 198 FEMRYDYMVDRIFNVYLNGFCYWVVCRPD---YSKAILSFSMSDEVFEEME-GPSVPQSTTYYQSVKTPWMLGTYDDCLS 273 (366)
Q Consensus 198 ~~~~~~~~~~~~~~v~~~G~lywl~~~~~---~~~~Il~fD~~~~~~~~i~-~P~~~~~~~~~~~l~~~~~~~~~~G~L~ 273 (366)
++.+. .....+.++|.+|.++.... ....+..||+.+++|+.++ +|... ..... +..+|+|+
T Consensus 145 ~p~~r----~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r----~~~~~------~~~~~~iy 210 (318)
T 2woz_A 145 LPIKV----YGHNVISHNGMIYCLGGKTDDKKCTNRVFIYNPKKGDWKDLAPMKTPR----SMFGV------AIHKGKIV 210 (318)
T ss_dssp CSSCE----ESCEEEEETTEEEEECCEESSSCBCCCEEEEETTTTEEEEECCCSSCC----BSCEE------EEETTEEE
T ss_pred CCCcc----cccEEEEECCEEEEEcCCCCCCCccceEEEEcCCCCEEEECCCCCCCc----ccceE------EEECCEEE
Confidence 33321 23456779999999974321 1345999999999999884 34322 12344 77899999
Q ss_pred EEEeC-CCCCEEEEEEee-C-CeeeEEEEecCCCcceeeEEEeeCCeEEEEEc---------------CCeEEEEECCCC
Q 039662 274 LLYSD-SFAHTFELWTMT-G-GNWTKHSTFGPFIETYQPIGFWRKGEFFLESS---------------DKRVVLYDSTYQ 335 (366)
Q Consensus 274 ~~~~~-~~~~~~~IW~l~-~-~~W~~~~~i~~~~~~~~~~~~~~~g~i~~~~~---------------~~~~~~yd~~~~ 335 (366)
++... .....-++|+++ . .+|+++..++.. ...+.. +.-++.|++... ...+..||++++
T Consensus 211 v~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~-r~~~~~-~~~~~~i~v~GG~~~~~~~~~~~~~~~~~~v~~yd~~~~ 288 (318)
T 2woz_A 211 IAGGVTEDGLSASVEAFDLKTNKWEVMTEFPQE-RSSISL-VSLAGSLYAIGGFAMIQLESKEFAPTEVNDIWKYEDDKK 288 (318)
T ss_dssp EEEEEETTEEEEEEEEEETTTCCEEECCCCSSC-CBSCEE-EEETTEEEEECCBCCBC----CCBCCBCCCEEEEETTTT
T ss_pred EEcCcCCCCccceEEEEECCCCeEEECCCCCCc-ccceEE-EEECCEEEEECCeeccCCCCceeccceeeeEEEEeCCCC
Confidence 99532 222345788888 4 889987654432 112222 234577776632 246899999999
Q ss_pred eEEEE
Q 039662 336 EMRDI 340 (366)
Q Consensus 336 ~~~~i 340 (366)
+|+++
T Consensus 289 ~W~~~ 293 (318)
T 2woz_A 289 EWAGM 293 (318)
T ss_dssp EEEEE
T ss_pred Eehhh
Confidence 99998
No 9
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=99.02 E-value=2e-07 Score=83.23 Aligned_cols=192 Identities=9% Similarity=0.128 Sum_probs=123.7
Q ss_pred eEEEEeCCCcceeecCCCCCCCCCcccccceeeEEeecCCCCCeEEEEEEeeecccCCCCCCcceEEEEEcCCCc---ee
Q 039662 117 LINLWNVSLNEYRVIPECRPRLPLYTKTHYANVALGLDPVTKDFKLVLILTLWNDHRDSFHDFSHVAVYKFSTNS---WR 193 (366)
Q Consensus 117 ~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~~vyss~~~~---W~ 193 (366)
.++++||.|++|..+|+.+..+ .. ..+...+. +++.+... +.......+++|+..++. |+
T Consensus 32 ~~~~~d~~~~~W~~~~~~p~~r------~~-~~~~~~~~-----~l~v~GG~-----~~~~~~~~~~~~d~~~~~~~~W~ 94 (301)
T 2vpj_A 32 VVEKYDPKTQEWSFLPSITRKR------RY-VASVSLHD-----RIYVIGGY-----DGRSRLSSVECLDYTADEDGVWY 94 (301)
T ss_dssp CEEEEETTTTEEEECCCCSSCC------BS-CEEEEETT-----EEEEECCB-----CSSCBCCCEEEEETTCCTTCCCE
T ss_pred EEEEEcCCCCeEEeCCCCChhh------cc-ccEEEECC-----EEEEEcCC-----CCCccCceEEEEECCCCCCCeeE
Confidence 4999999999999999766421 11 12222221 56655441 112234578999999999 99
Q ss_pred ecCCCccccceeecccceEEECceEEEEEecCCC--ceEEEEEeCCCceeeEeC-CCCCCCCCCccccccccceeeEecC
Q 039662 194 DLEGFEMRYDYMVDRIFNVYLNGFCYWVVCRPDY--SKAILSFSMSDEVFEEME-GPSVPQSTTYYQSVKTPWMLGTYDD 270 (366)
Q Consensus 194 ~~~~~~~~~~~~~~~~~~v~~~G~lywl~~~~~~--~~~Il~fD~~~~~~~~i~-~P~~~~~~~~~~~l~~~~~~~~~~G 270 (366)
.+..++.+. .....+.++|.+|.++..... ...+..||+.+.+|+.+. +|... ..... +..+|
T Consensus 95 ~~~~~p~~r----~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r----~~~~~------~~~~~ 160 (301)
T 2vpj_A 95 SVAPMNVRR----GLAGATTLGDMIYVSGGFDGSRRHTSMERYDPNIDQWSMLGDMQTAR----EGAGL------VVASG 160 (301)
T ss_dssp EECCCSSCC----BSCEEEEETTEEEEECCBCSSCBCCEEEEEETTTTEEEEEEECSSCC----BSCEE------EEETT
T ss_pred ECCCCCCCc----cceeEEEECCEEEEEcccCCCcccceEEEEcCCCCeEEECCCCCCCc----ccceE------EEECC
Confidence 996443322 235567789999999743221 346999999999998873 44322 12334 67799
Q ss_pred eEEEEEeCC-CCCEEEEEEee--CCeeeEEEEecCCCcceeeEEEeeCCeEEEEEc------CCeEEEEECCCCeEEEEE
Q 039662 271 CLSLLYSDS-FAHTFELWTMT--GGNWTKHSTFGPFIETYQPIGFWRKGEFFLESS------DKRVVLYDSTYQEMRDIR 341 (366)
Q Consensus 271 ~L~~~~~~~-~~~~~~IW~l~--~~~W~~~~~i~~~~~~~~~~~~~~~g~i~~~~~------~~~~~~yd~~~~~~~~i~ 341 (366)
+|+++.... ....-++|.++ ...|+++-.++.. ......+.-++.|++... ...+..||+++++|+.+.
T Consensus 161 ~iyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~--r~~~~~~~~~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~~ 238 (301)
T 2vpj_A 161 VIYCLGGYDGLNILNSVEKYDPHTGHWTNVTPMATK--RSGAGVALLNDHIYVVGGFDGTAHLSSVEAYNIRTDSWTTVT 238 (301)
T ss_dssp EEEEECCBCSSCBCCCEEEEETTTTEEEEECCCSSC--CBSCEEEEETTEEEEECCBCSSSBCCCEEEEETTTTEEEEEC
T ss_pred EEEEECCCCCCcccceEEEEeCCCCcEEeCCCCCcc--cccceEEEECCEEEEEeCCCCCcccceEEEEeCCCCcEEECC
Confidence 999884322 22344678888 4899988544332 112222234677777643 256999999999999875
No 10
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=99.01 E-value=9.5e-08 Score=85.69 Aligned_cols=191 Identities=10% Similarity=0.023 Sum_probs=123.1
Q ss_pred eEEEEeCCCcceeecCCCCCCCCCcccccceeeEEeecCCCCCeEEEEEEeeecccCCCCCCcceEEEEEcCCCceeecC
Q 039662 117 LINLWNVSLNEYRVIPECRPRLPLYTKTHYANVALGLDPVTKDFKLVLILTLWNDHRDSFHDFSHVAVYKFSTNSWRDLE 196 (366)
Q Consensus 117 ~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~~vyss~~~~W~~~~ 196 (366)
.+.++||.|++|..+++.+..+ .. ..+..++. +++.+.. . + ......+++|+..+++|+.+.
T Consensus 25 ~~~~~d~~~~~W~~~~~~p~~r------~~-~~~~~~~~-----~lyv~GG----~-~-~~~~~~~~~~d~~~~~W~~~~ 86 (306)
T 3ii7_A 25 SCRYFNPKDYSWTDIRCPFEKR------RD-AACVFWDN-----VVYILGG----S-Q-LFPIKRMDCYNVVKDSWYSKL 86 (306)
T ss_dssp SEEEEETTTTEEEECCCCSCCC------BS-CEEEEETT-----EEEEECC----B-S-SSBCCEEEEEETTTTEEEEEE
T ss_pred eEEEecCCCCCEecCCCCCccc------ce-eEEEEECC-----EEEEEeC----C-C-CCCcceEEEEeCCCCeEEECC
Confidence 4999999999999998776532 11 12222322 4555544 1 1 223458899999999999986
Q ss_pred CCccccceeecccceEEECceEEEEEecC-C--CceEEEEEeCCCceeeEeC-CCCCCCCCCccccccccceeeEecCeE
Q 039662 197 GFEMRYDYMVDRIFNVYLNGFCYWVVCRP-D--YSKAILSFSMSDEVFEEME-GPSVPQSTTYYQSVKTPWMLGTYDDCL 272 (366)
Q Consensus 197 ~~~~~~~~~~~~~~~v~~~G~lywl~~~~-~--~~~~Il~fD~~~~~~~~i~-~P~~~~~~~~~~~l~~~~~~~~~~G~L 272 (366)
.++.+. .....+.++|.+|.++... . ....+..||+.+++|+.+. +|... ..... +..+|+|
T Consensus 87 ~~p~~r----~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r----~~~~~------~~~~~~i 152 (306)
T 3ii7_A 87 GPPTPR----DSLAACAAEGKIYTSGGSEVGNSALYLFECYDTRTESWHTKPSMLTQR----CSHGM------VEANGLI 152 (306)
T ss_dssp CCSSCC----BSCEEEEETTEEEEECCBBTTBSCCCCEEEEETTTTEEEEECCCSSCC----BSCEE------EEETTEE
T ss_pred CCCccc----cceeEEEECCEEEEECCCCCCCcEeeeEEEEeCCCCceEeCCCCcCCc----ceeEE------EEECCEE
Confidence 433222 2345677899999997532 1 1346999999999999883 44322 12344 7789999
Q ss_pred EEEEeC-CCCC----EEEEEEee--CCeeeEEEEecCCCcceeeEEEeeCCeEEEEEc------CCeEEEEECCCCeEEE
Q 039662 273 SLLYSD-SFAH----TFELWTMT--GGNWTKHSTFGPFIETYQPIGFWRKGEFFLESS------DKRVVLYDSTYQEMRD 339 (366)
Q Consensus 273 ~~~~~~-~~~~----~~~IW~l~--~~~W~~~~~i~~~~~~~~~~~~~~~g~i~~~~~------~~~~~~yd~~~~~~~~ 339 (366)
+++... .... .-++|.++ ...|+++-.++.. ......+.-++.|++... ...+..||+++++|+.
T Consensus 153 yv~GG~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~--r~~~~~~~~~~~i~v~GG~~~~~~~~~~~~yd~~~~~W~~ 230 (306)
T 3ii7_A 153 YVCGGSLGNNVSGRVLNSCEVYDPATETWTELCPMIEA--RKNHGLVFVKDKIFAVGGQNGLGGLDNVEYYDIKLNEWKM 230 (306)
T ss_dssp EEECCEESCTTTCEECCCEEEEETTTTEEEEECCCSSC--CBSCEEEEETTEEEEECCEETTEEBCCEEEEETTTTEEEE
T ss_pred EEECCCCCCCCcccccceEEEeCCCCCeEEECCCccch--hhcceEEEECCEEEEEeCCCCCCCCceEEEeeCCCCcEEE
Confidence 998421 1212 45688888 4899988644432 112222233677777632 2568999999999998
Q ss_pred EE
Q 039662 340 IR 341 (366)
Q Consensus 340 i~ 341 (366)
+.
T Consensus 231 ~~ 232 (306)
T 3ii7_A 231 VS 232 (306)
T ss_dssp CC
T ss_pred CC
Confidence 75
No 11
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=98.98 E-value=1.6e-07 Score=83.99 Aligned_cols=192 Identities=12% Similarity=0.100 Sum_probs=122.8
Q ss_pred eEEEEeCCCcceeecCCCCCCCCCcccccceeeEEeecCCCCCeEEEEEEeeecccCCCCCCcceEEEEEcCCCceeecC
Q 039662 117 LINLWNVSLNEYRVIPECRPRLPLYTKTHYANVALGLDPVTKDFKLVLILTLWNDHRDSFHDFSHVAVYKFSTNSWRDLE 196 (366)
Q Consensus 117 ~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~~vyss~~~~W~~~~ 196 (366)
.+.++||.+++|..+++.+..+ ... .+..++. +|+.+... +.......+++|+..+++|+.++
T Consensus 31 ~~~~~d~~~~~W~~~~~~p~~r------~~~-~~~~~~~-----~lyv~GG~-----~~~~~~~~~~~~d~~~~~W~~~~ 93 (302)
T 2xn4_A 31 SVECYDFKEERWHQVAELPSRR------CRA-GMVYMAG-----LVFAVGGF-----NGSLRVRTVDSYDPVKDQWTSVA 93 (302)
T ss_dssp CEEEEETTTTEEEEECCCSSCC------BSC-EEEEETT-----EEEEESCB-----CSSSBCCCEEEEETTTTEEEEEC
T ss_pred cEEEEcCcCCcEeEcccCCccc------ccc-eEEEECC-----EEEEEeCc-----CCCccccceEEECCCCCceeeCC
Confidence 3899999999999998766532 111 1222221 45555441 11123357899999999999996
Q ss_pred CCccccceeecccceEEECceEEEEEecCCC--ceEEEEEeCCCceeeEeC-CCCCCCCCCccccccccceeeEecCeEE
Q 039662 197 GFEMRYDYMVDRIFNVYLNGFCYWVVCRPDY--SKAILSFSMSDEVFEEME-GPSVPQSTTYYQSVKTPWMLGTYDDCLS 273 (366)
Q Consensus 197 ~~~~~~~~~~~~~~~v~~~G~lywl~~~~~~--~~~Il~fD~~~~~~~~i~-~P~~~~~~~~~~~l~~~~~~~~~~G~L~ 273 (366)
.++.+. .....+.++|.+|.++..... ...+..||+.+++|+.+. +|... ..... +..+|+|+
T Consensus 94 ~~p~~r----~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r----~~~~~------~~~~~~iy 159 (302)
T 2xn4_A 94 NMRDRR----STLGAAVLNGLLYAVGGFDGSTGLSSVEAYNIKSNEWFHVAPMNTRR----SSVGV------GVVGGLLY 159 (302)
T ss_dssp CCSSCC----BSCEEEEETTEEEEEEEECSSCEEEEEEEEETTTTEEEEECCCSSCC----BSCEE------EEETTEEE
T ss_pred CCCccc----cceEEEEECCEEEEEcCCCCCccCceEEEEeCCCCeEeecCCCCCcc----cCceE------EEECCEEE
Confidence 433322 235567789999999854322 346899999999999884 34322 12334 77899999
Q ss_pred EEEeC-CCC--CEEEEEEee--CCeeeEEEEecCCCcceeeEEEeeCCeEEEEEc------CCeEEEEECCCCeEEEEE
Q 039662 274 LLYSD-SFA--HTFELWTMT--GGNWTKHSTFGPFIETYQPIGFWRKGEFFLESS------DKRVVLYDSTYQEMRDIR 341 (366)
Q Consensus 274 ~~~~~-~~~--~~~~IW~l~--~~~W~~~~~i~~~~~~~~~~~~~~~g~i~~~~~------~~~~~~yd~~~~~~~~i~ 341 (366)
++... ... ..-++|..+ ...|+++-.++.. ...+ ..+.-++.|++... ...+..||+++++|+.+.
T Consensus 160 v~GG~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~-r~~~-~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~ 236 (302)
T 2xn4_A 160 AVGGYDVASRQCLSTVECYNATTNEWTYIAEMSTR-RSGA-GVGVLNNLLYAVGGHDGPLVRKSVEVYDPTTNAWRQVA 236 (302)
T ss_dssp EECCEETTTTEECCCEEEEETTTTEEEEECCCSSC-CBSC-EEEEETTEEEEECCBSSSSBCCCEEEEETTTTEEEEEC
T ss_pred EEeCCCCCCCccccEEEEEeCCCCcEEECCCCccc-cccc-cEEEECCEEEEECCCCCCcccceEEEEeCCCCCEeeCC
Confidence 98421 111 133688888 4899998554432 1122 22233677877643 257999999999999876
No 12
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=98.96 E-value=4.4e-08 Score=88.06 Aligned_cols=196 Identities=11% Similarity=0.042 Sum_probs=121.4
Q ss_pred eEEEEeCCCcceeecCCCCCCCCCcccccceeeEEeecCCCCCeEEEEEEeeecccCCCCCCcceEEEEEcCCCceeecC
Q 039662 117 LINLWNVSLNEYRVIPECRPRLPLYTKTHYANVALGLDPVTKDFKLVLILTLWNDHRDSFHDFSHVAVYKFSTNSWRDLE 196 (366)
Q Consensus 117 ~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~~vyss~~~~W~~~~ 196 (366)
.+.++||.|++|..+++.+..+ ... .+...+. +|+.+..... ..+.......+++|+..++.|+.+.
T Consensus 40 ~~~~~d~~~~~W~~~~~~p~~r------~~~-~~~~~~~-----~lyv~GG~~~-~~~~~~~~~~~~~~d~~~~~W~~~~ 106 (308)
T 1zgk_A 40 YLEAYNPSNGTWLRLADLQVPR------SGL-AGCVVGG-----LLYAVGGRNN-SPDGNTDSSALDCYNPMTNQWSPCA 106 (308)
T ss_dssp CEEEEETTTTEEEECCCCSSCC------BSC-EEEEETT-----EEEEECCEEE-ETTEEEECCCEEEEETTTTEEEECC
T ss_pred eEEEEcCCCCeEeECCCCCccc------ccc-eEEEECC-----EEEEECCCcC-CCCCCeecceEEEECCCCCeEeECC
Confidence 4999999999999998766532 111 1122221 4555543100 0011112347899999999999996
Q ss_pred CCccccceeecccceEEECceEEEEEecCCC--ceEEEEEeCCCceeeEeC-CCCCCCCCCccccccccceeeEecCeEE
Q 039662 197 GFEMRYDYMVDRIFNVYLNGFCYWVVCRPDY--SKAILSFSMSDEVFEEME-GPSVPQSTTYYQSVKTPWMLGTYDDCLS 273 (366)
Q Consensus 197 ~~~~~~~~~~~~~~~v~~~G~lywl~~~~~~--~~~Il~fD~~~~~~~~i~-~P~~~~~~~~~~~l~~~~~~~~~~G~L~ 273 (366)
.++.+. .....+.++|.+|.++..... ...+..||+.+++|+.+. +|.... .... +..+|+|+
T Consensus 107 ~~p~~r----~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~----~~~~------~~~~~~iy 172 (308)
T 1zgk_A 107 PMSVPR----NRIGVGVIDGHIYAVGGSHGCIHHNSVERYEPERDEWHLVAPMLTRRI----GVGV------AVLNRLLY 172 (308)
T ss_dssp CCSSCC----BTCEEEEETTEEEEECCEETTEECCCEEEEETTTTEEEECCCCSSCCB----SCEE------EEETTEEE
T ss_pred CCCcCc----cccEEEEECCEEEEEcCCCCCcccccEEEECCCCCeEeECCCCCcccc----ceEE------EEECCEEE
Confidence 433321 234567789999999642211 345899999999999873 443321 2334 67799999
Q ss_pred EEEeCC-CCCEEEEEEee--CCeeeEEEEecCCCcceeeEEEeeCCeEEEEEc------CCeEEEEECCCCeEEEEE
Q 039662 274 LLYSDS-FAHTFELWTMT--GGNWTKHSTFGPFIETYQPIGFWRKGEFFLESS------DKRVVLYDSTYQEMRDIR 341 (366)
Q Consensus 274 ~~~~~~-~~~~~~IW~l~--~~~W~~~~~i~~~~~~~~~~~~~~~g~i~~~~~------~~~~~~yd~~~~~~~~i~ 341 (366)
++.... ....-++|.++ ...|+++-.++... ..+... .-++.|++... ...+..||+++++|+.+.
T Consensus 173 v~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r-~~~~~~-~~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~ 247 (308)
T 1zgk_A 173 AVGGFDGTNRLNSAECYYPERNEWRMITAMNTIR-SGAGVC-VLHNCIYAAGGYDGQDQLNSVERYDVETETWTFVA 247 (308)
T ss_dssp EECCBCSSCBCCCEEEEETTTTEEEECCCCSSCC-BSCEEE-EETTEEEEECCBCSSSBCCCEEEEETTTTEEEECC
T ss_pred EEeCCCCCCcCceEEEEeCCCCeEeeCCCCCCcc-ccceEE-EECCEEEEEeCCCCCCccceEEEEeCCCCcEEECC
Confidence 984322 22244678888 48999875444321 122222 23677877643 257999999999999875
No 13
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=98.93 E-value=8.7e-08 Score=87.91 Aligned_cols=214 Identities=13% Similarity=0.043 Sum_probs=125.5
Q ss_pred eeecceEEEeec--CCeEEEEeCC--CcceeecCCCC-CCCCCcccccceeeEEeecCCCCCeEEEEEEeeecccCC-CC
Q 039662 103 GPYDGIFCLLKS--HTLINLWNVS--LNEYRVIPECR-PRLPLYTKTHYANVALGLDPVTKDFKLVLILTLWNDHRD-SF 176 (366)
Q Consensus 103 ~s~~GLl~~~~~--~~~~~V~NP~--T~~~~~LP~~~-~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~-~~ 176 (366)
+..+|.|.+..+ ...++++||. +++|..+|+.+ ..+ .. ..+..++. +|+.+..... ..+ ..
T Consensus 16 ~~~~~~iyv~GG~~~~~~~~~d~~~~~~~W~~~~~~p~~~R-----~~--~~~~~~~~-----~lyv~GG~~~-~~~~~~ 82 (357)
T 2uvk_A 16 AIDNDTVYIGLGSAGTAWYKLDTQAKDKKWTALAAFPGGPR-----DQ--ATSAFIDG-----NLYVFGGIGK-NSEGLT 82 (357)
T ss_dssp EEETTEEEEECGGGTTCEEEEETTSSSCCEEECCCCTTCCC-----BS--CEEEEETT-----EEEEECCEEE-CTTSCE
T ss_pred EEECCEEEEEeCcCCCeEEEEccccCCCCeeECCCCCCCcC-----cc--ceEEEECC-----EEEEEcCCCC-CCCccc
Confidence 444676665543 2359999998 59999998866 321 11 12222331 5666544100 001 11
Q ss_pred CCcceEEEEEcCCCceeecCCCccccceeecccceEEECceEEEEEecCCC-----------------------------
Q 039662 177 HDFSHVAVYKFSTNSWRDLEGFEMRYDYMVDRIFNVYLNGFCYWVVCRPDY----------------------------- 227 (366)
Q Consensus 177 ~~~~~~~vyss~~~~W~~~~~~~~~~~~~~~~~~~v~~~G~lywl~~~~~~----------------------------- 227 (366)
.....+++|+..+++|+.+..++ +.. .....++..+|.+|.++.....
T Consensus 83 ~~~~~v~~yd~~~~~W~~~~~~~--p~~-r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (357)
T 2uvk_A 83 QVFNDVHKYNPKTNSWVKLMSHA--PMG-MAGHVTFVHNGKAYVTGGVNQNIFNGYFEDLNEAGKDSTAIDKINAHYFDK 159 (357)
T ss_dssp EECCCEEEEETTTTEEEECSCCC--SSC-CSSEEEEEETTEEEEEECCCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHSS
T ss_pred eeeccEEEEeCCCCcEEECCCCC--Ccc-cccceEEEECCEEEEEeCcCCCcCcccccchhhcCCcccchhhhhhhhccc
Confidence 12347899999999999996433 111 1224456699999999853211
Q ss_pred -------ceEEEEEeCCCceeeEe-CCCCCCCCCCccccccccceeeEecCeEEEEEe--CCCCCEEEEEEee----CCe
Q 039662 228 -------SKAILSFSMSDEVFEEM-EGPSVPQSTTYYQSVKTPWMLGTYDDCLSLLYS--DSFAHTFELWTMT----GGN 293 (366)
Q Consensus 228 -------~~~Il~fD~~~~~~~~i-~~P~~~~~~~~~~~l~~~~~~~~~~G~L~~~~~--~~~~~~~~IW~l~----~~~ 293 (366)
...+..||+.+++|+.+ ++|..... ...+ +..+|+|+++.. ......-++|.++ ...
T Consensus 160 ~~~~~~~~~~v~~yd~~~~~W~~~~~~p~~~~~---~~~~------~~~~~~iyv~GG~~~~~~~~~~v~~~d~d~~~~~ 230 (357)
T 2uvk_A 160 KAEDYFFNKFLLSFDPSTQQWSYAGESPWYGTA---GAAV------VNKGDKTWLINGEAKPGLRTDAVFELDFTGNNLK 230 (357)
T ss_dssp CGGGGCCCCEEEEEETTTTEEEEEEECSSCCCB---SCEE------EEETTEEEEECCEEETTEECCCEEEEECC---CE
T ss_pred cccccCCcccEEEEeCCCCcEEECCCCCCCCcc---cccE------EEECCEEEEEeeecCCCcccCceEEEEecCCCCc
Confidence 24799999999999987 45533211 1344 778999998832 1122234567665 378
Q ss_pred eeEEEEecCCCcceeeEEEeeCCeEEEEEcC-----------------------CeEEEEECCCCeEEEEE
Q 039662 294 WTKHSTFGPFIETYQPIGFWRKGEFFLESSD-----------------------KRVVLYDSTYQEMRDIR 341 (366)
Q Consensus 294 W~~~~~i~~~~~~~~~~~~~~~g~i~~~~~~-----------------------~~~~~yd~~~~~~~~i~ 341 (366)
|+++..++..........+.-++.|++.... ..+..||+++++|+.+.
T Consensus 231 W~~~~~~~~~~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~g~~~~~~~~~~~~~~~~yd~~~~~W~~~~ 301 (357)
T 2uvk_A 231 WNKLAPVSSPDGVAGGFAGISNDSLIFAGGAGFKGSRENYQNGKNYAHEGLKKSYSTDIHLWHNGKWDKSG 301 (357)
T ss_dssp EEECCCSSTTTCCBSCEEEEETTEEEEECCEECTTHHHHHHTTCSSTTTTCCCEECCEEEECC---CEEEE
T ss_pred EEecCCCCCCcccccceEEEECCEEEEEcCccccCCcccccccceeccccccceeeEEEEecCCCceeeCC
Confidence 9987665432222222233446778776431 25789999999999986
No 14
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=98.86 E-value=5.9e-07 Score=80.88 Aligned_cols=198 Identities=10% Similarity=0.057 Sum_probs=118.7
Q ss_pred eEEEEeCCCcceeecCCCCCCCCCcccccceeeEEeecCCCCCeEEEEEEeeecccCCCCC-CcceEEEEEcCCCceeec
Q 039662 117 LINLWNVSLNEYRVIPECRPRLPLYTKTHYANVALGLDPVTKDFKLVLILTLWNDHRDSFH-DFSHVAVYKFSTNSWRDL 195 (366)
Q Consensus 117 ~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~-~~~~~~vyss~~~~W~~~ 195 (366)
.+.++||.|++|.. ++.+...+ .. ..+.... .+ +|+.+......-..... ....+.+|+..+++|+.+
T Consensus 14 ~~~~yd~~~~~W~~-~~~~~p~~----r~--~~~~~~~--~~--~iyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~~ 82 (315)
T 4asc_A 14 GAVAYDPAANECYC-ASLSSQVP----KN--HVSLVTK--EN--QVFVAGGLFYNEDNKEDPMSAYFLQFDHLDSEWLGM 82 (315)
T ss_dssp EEEEEETTTTEEEE-EECCCCSC----SS--EEEEECT--TC--CEEEEEEEEECSSCSSSCEEEEEEEEETTTTEEEEC
T ss_pred ceEEECCCCCeEec-CCCCCCCC----cc--ceEEEEE--CC--EEEEEcCcccCCCCCccccccceEEecCCCCeEEEC
Confidence 49999999999986 33322111 11 1222221 12 34444431000001111 123488999999999998
Q ss_pred CCCccccceeecccceEEECceEEEEEecC-----CCceEEEEEeCCCceeeEe-CCCCCCCCCCccccccccceeeEec
Q 039662 196 EGFEMRYDYMVDRIFNVYLNGFCYWVVCRP-----DYSKAILSFSMSDEVFEEM-EGPSVPQSTTYYQSVKTPWMLGTYD 269 (366)
Q Consensus 196 ~~~~~~~~~~~~~~~~v~~~G~lywl~~~~-----~~~~~Il~fD~~~~~~~~i-~~P~~~~~~~~~~~l~~~~~~~~~~ 269 (366)
+.++.+. .....+.++|.+|.++... .....+..||+.+.+|+.+ ++|... ..... +..+
T Consensus 83 ~~~p~~r----~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r----~~~~~------~~~~ 148 (315)
T 4asc_A 83 PPLPSPR----CLFGLGEALNSIYVVGGREIKDGERCLDSVMCYDRLSFKWGESDPLPYVV----YGHTV------LSHM 148 (315)
T ss_dssp CCBSSCE----ESCEEEEETTEEEEECCEESSTTCCBCCCEEEEETTTTEEEECCCCSSCC----BSCEE------EEET
T ss_pred CCCCcch----hceeEEEECCEEEEEeCCcCCCCCcccceEEEECCCCCcEeECCCCCCcc----cceeE------EEEC
Confidence 6433221 2356677899999997531 1134699999999999987 344432 12344 7789
Q ss_pred CeEEEEEeC--CCCCEEEEEEee--CCeeeEEEEecCCCcceeeEEEeeCCeEEEEEc------CCeEEEEECCCCeEEE
Q 039662 270 DCLSLLYSD--SFAHTFELWTMT--GGNWTKHSTFGPFIETYQPIGFWRKGEFFLESS------DKRVVLYDSTYQEMRD 339 (366)
Q Consensus 270 G~L~~~~~~--~~~~~~~IW~l~--~~~W~~~~~i~~~~~~~~~~~~~~~g~i~~~~~------~~~~~~yd~~~~~~~~ 339 (366)
|+|+++... .....-++|.++ ..+|+++-.++.. .....++.-++.|++... ...+..||+++++|+.
T Consensus 149 ~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~--r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~ 226 (315)
T 4asc_A 149 DLVYVIGGKGSDRKCLNKMCVYDPKKFEWKELAPMQTA--RSLFGATVHDGRIIVAAGVTDTGLTSSAEVYSITDNKWAP 226 (315)
T ss_dssp TEEEEECCBCTTSCBCCCEEEEETTTTEEEECCCCSSC--CBSCEEEEETTEEEEEEEECSSSEEEEEEEEETTTTEEEE
T ss_pred CEEEEEeCCCCCCcccceEEEEeCCCCeEEECCCCCCc--hhceEEEEECCEEEEEeccCCCCccceEEEEECCCCeEEE
Confidence 999998542 223344788888 4899987654432 112222233677777643 1368999999999998
Q ss_pred EE
Q 039662 340 IR 341 (366)
Q Consensus 340 i~ 341 (366)
+.
T Consensus 227 ~~ 228 (315)
T 4asc_A 227 FE 228 (315)
T ss_dssp EC
T ss_pred CC
Confidence 75
No 15
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=98.84 E-value=8e-07 Score=80.11 Aligned_cols=206 Identities=12% Similarity=0.109 Sum_probs=121.7
Q ss_pred ceEEEeecCCeEEEEeCCCcceeecCCCCCCCCCcccccceeeEEeecCCCCCeEEEEEEeeecccCCCC--CCcceEEE
Q 039662 107 GIFCLLKSHTLINLWNVSLNEYRVIPECRPRLPLYTKTHYANVALGLDPVTKDFKLVLILTLWNDHRDSF--HDFSHVAV 184 (366)
Q Consensus 107 GLl~~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~--~~~~~~~v 184 (366)
+.|++-.+.. ..++||.|++|...|.+.. .+ ... .+..... + +|+.+.....+ .+.. .....+.+
T Consensus 16 ~~i~~~GG~~-~~~yd~~~~~W~~~~~~~~-~~----r~~--~~~~~~~--~--~lyv~GG~~~~-~~~~~~~~~~~~~~ 82 (318)
T 2woz_A 16 DLILLVNDTA-AVAYDPMENECYLTALAEQ-IP----RNH--SSIVTQQ--N--QVYVVGGLYVD-EENKDQPLQSYFFQ 82 (318)
T ss_dssp EEEEEECSSE-EEEEETTTTEEEEEEECTT-SC----SSE--EEEECSS--S--CEEEEESSCC--------CCCBEEEE
T ss_pred chhhhccccc-eEEECCCCCceecccCCcc-CC----ccc--eEEEEEC--C--EEEEECCcccC-ccccCCCccccEEE
Confidence 3444444444 8899999999998543221 11 111 2222211 1 45555431000 0010 11124889
Q ss_pred EEcCCCceeecCCCccccceeecccceEEECceEEEEEecCC--C--ceEEEEEeCCCceeeEeC-CCCCCCCCCccccc
Q 039662 185 YKFSTNSWRDLEGFEMRYDYMVDRIFNVYLNGFCYWVVCRPD--Y--SKAILSFSMSDEVFEEME-GPSVPQSTTYYQSV 259 (366)
Q Consensus 185 yss~~~~W~~~~~~~~~~~~~~~~~~~v~~~G~lywl~~~~~--~--~~~Il~fD~~~~~~~~i~-~P~~~~~~~~~~~l 259 (366)
|+..+++|+.++.++.+. .....+.++|.+|.++.... . ...+..||+.+.+|+.+. +|.... ....
T Consensus 83 ~d~~~~~W~~~~~~p~~r----~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~----~~~~ 154 (318)
T 2woz_A 83 LDNVSSEWVGLPPLPSAR----CLFGLGEVDDKIYVVAGKDLQTEASLDSVLCYDPVAAKWSEVKNLPIKVY----GHNV 154 (318)
T ss_dssp EETTTTEEEECSCBSSCB----CSCEEEEETTEEEEEEEEBTTTCCEEEEEEEEETTTTEEEEECCCSSCEE----SCEE
T ss_pred EeCCCCcEEECCCCCccc----cccceEEECCEEEEEcCccCCCCcccceEEEEeCCCCCEeECCCCCCccc----ccEE
Confidence 999999999996433322 23456778999999986431 1 346999999999999884 444321 2234
Q ss_pred cccceeeEecCeEEEEEe--CCCCCEEEEEEee--CCeeeEEEEecCCCcceeeEEEeeCCeEEEEEc------CCeEEE
Q 039662 260 KTPWMLGTYDDCLSLLYS--DSFAHTFELWTMT--GGNWTKHSTFGPFIETYQPIGFWRKGEFFLESS------DKRVVL 329 (366)
Q Consensus 260 ~~~~~~~~~~G~L~~~~~--~~~~~~~~IW~l~--~~~W~~~~~i~~~~~~~~~~~~~~~g~i~~~~~------~~~~~~ 329 (366)
+..+|+|+++.. ......-++|+++ ..+|+++-.++... ..+.. +.-++.|++... ...+..
T Consensus 155 ------~~~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r-~~~~~-~~~~~~iyv~GG~~~~~~~~~~~~ 226 (318)
T 2woz_A 155 ------ISHNGMIYCLGGKTDDKKCTNRVFIYNPKKGDWKDLAPMKTPR-SMFGV-AIHKGKIVIAGGVTEDGLSASVEA 226 (318)
T ss_dssp ------EEETTEEEEECCEESSSCBCCCEEEEETTTTEEEEECCCSSCC-BSCEE-EEETTEEEEEEEEETTEEEEEEEE
T ss_pred ------EEECCEEEEEcCCCCCCCccceEEEEcCCCCEEEECCCCCCCc-ccceE-EEECCEEEEEcCcCCCCccceEEE
Confidence 678999998843 2222334688888 48999876444321 11222 234677777642 245789
Q ss_pred EECCCCeEEEEE
Q 039662 330 YDSTYQEMRDIR 341 (366)
Q Consensus 330 yd~~~~~~~~i~ 341 (366)
||+++++|+.+.
T Consensus 227 yd~~~~~W~~~~ 238 (318)
T 2woz_A 227 FDLKTNKWEVMT 238 (318)
T ss_dssp EETTTCCEEECC
T ss_pred EECCCCeEEECC
Confidence 999999999875
No 16
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=98.79 E-value=6.3e-07 Score=89.74 Aligned_cols=201 Identities=12% Similarity=0.160 Sum_probs=120.0
Q ss_pred eEEEEeCCCcceeecC-CCCC-CCCCcccccceeeEEeecCCCCCeEEEEEEeeecccCCCCCCcceEEEEEcCCCceee
Q 039662 117 LINLWNVSLNEYRVIP-ECRP-RLPLYTKTHYANVALGLDPVTKDFKLVLILTLWNDHRDSFHDFSHVAVYKFSTNSWRD 194 (366)
Q Consensus 117 ~~~V~NP~T~~~~~LP-~~~~-~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~~vyss~~~~W~~ 194 (366)
.++++||.|++|..++ +.+. ..+.. ... ..+..+.. .+ +++.++. ..........+++|+..++.|+.
T Consensus 413 ~v~~yd~~~~~W~~~~~~~p~~~~p~~--R~~-hs~~~~~~-~~--~lyv~GG----~~~~~~~~~dv~~yd~~t~~W~~ 482 (695)
T 2zwa_A 413 EILQLSIHYDKIDMKNIEVSSSEVPVA--RMC-HTFTTISR-NN--QLLLIGG----RKAPHQGLSDNWIFDMKTREWSM 482 (695)
T ss_dssp CEEEEEECSSCEEEEECCCCCSCCCCC--CBS-CEEEEETT-TT--EEEEECC----BSSTTCBCCCCEEEETTTTEEEE
T ss_pred cEEEEECCCCeEEEeccCCCCCCCCcc--ccc-eEEEEEcc-CC--EEEEEcC----CCCCCCccccEEEEeCCCCcEEE
Confidence 4999999999999998 5221 01100 111 12222210 11 4666654 11111133478999999999999
Q ss_pred cCCCccccceeecccceEEE-CceEEEEEecCCCceEEEEEeCCCceeeEeCC----CCCCCCCCccccccccceeeEec
Q 039662 195 LEGFEMRYDYMVDRIFNVYL-NGFCYWVVCRPDYSKAILSFSMSDEVFEEMEG----PSVPQSTTYYQSVKTPWMLGTYD 269 (366)
Q Consensus 195 ~~~~~~~~~~~~~~~~~v~~-~G~lywl~~~~~~~~~Il~fD~~~~~~~~i~~----P~~~~~~~~~~~l~~~~~~~~~~ 269 (366)
++.++.+. ....++.+ +|.+|.++...... .+..||+.+++|+.+.. |.... .... +.++
T Consensus 483 ~~~~p~~R----~~h~~~~~~~~~iyv~GG~~~~~-~v~~yd~~t~~W~~~~~~g~~p~~r~----~~~a------~v~~ 547 (695)
T 2zwa_A 483 IKSLSHTR----FRHSACSLPDGNVLILGGVTEGP-AMLLYNVTEEIFKDVTPKDEFFQNSL----VSAG------LEFD 547 (695)
T ss_dssp CCCCSBCC----BSCEEEECTTSCEEEECCBCSSC-SEEEEETTTTEEEECCCSSGGGGSCC----BSCE------EEEE
T ss_pred CCCCCCCc----ccceEEEEcCCEEEEECCCCCCC-CEEEEECCCCceEEccCCCCCCCccc----ceeE------EEEe
Confidence 96433322 22445554 99999997543323 79999999999998863 33221 1122 3445
Q ss_pred ---CeEEEEEeCCC---CCEEEEEEee--CCe------eeEEEEecCCCcceeeEEEeeCCeEEEEEc---------CCe
Q 039662 270 ---DCLSLLYSDSF---AHTFELWTMT--GGN------WTKHSTFGPFIETYQPIGFWRKGEFFLESS---------DKR 326 (366)
Q Consensus 270 ---G~L~~~~~~~~---~~~~~IW~l~--~~~------W~~~~~i~~~~~~~~~~~~~~~g~i~~~~~---------~~~ 326 (366)
|+|+++..... ...-++|..+ ... |.++...++.....+...+.+++.|++... ...
T Consensus 548 ~~~~~iyv~GG~~~~~~~~~~~v~~yd~~~~~w~~~~~W~~~~~~p~~~R~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~ 627 (695)
T 2zwa_A 548 PVSKQGIILGGGFMDQTTVSDKAIIFKYDAENATEPITVIKKLQHPLFQRYGSQIKYITPRKLLIVGGTSPSGLFDRTNS 627 (695)
T ss_dssp TTTTEEEEECCBCTTSSCBCCEEEEEEECTTCSSCCEEEEEEEECGGGCCBSCEEEEEETTEEEEECCBCSSCCCCTTTS
T ss_pred CCCCEEEEECCcCCCCCeeeCcEEEEEccCCccccceEEEEcCCCCCCCcccceEEEeCCCEEEEECCccCCCCCCCCCe
Confidence 88998854211 2234677777 355 888777543323333444445478877643 246
Q ss_pred EEEEECCCCeEEEEEE
Q 039662 327 VVLYDSTYQEMRDIRI 342 (366)
Q Consensus 327 ~~~yd~~~~~~~~i~~ 342 (366)
+..||+++++|+.+.+
T Consensus 628 v~~yd~~t~~W~~~~~ 643 (695)
T 2zwa_A 628 IISLDPLSETLTSIPI 643 (695)
T ss_dssp EEEEETTTTEEEECCC
T ss_pred EEEEECCCCeEEEeec
Confidence 9999999999996553
No 17
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=98.76 E-value=1.2e-05 Score=75.81 Aligned_cols=45 Identities=13% Similarity=0.349 Sum_probs=40.1
Q ss_pred ccCCcHHHHHHHHhcCChhhhhhheechhhhhhhcCC-hHHHHHHH
Q 039662 3 VKYLSDDMMIETLSRLPVKSLMRFQCVCKSWYDLVKD-PNFIYKHL 47 (366)
Q Consensus 3 ~~~LP~Dll~eIL~rLP~~sl~r~~~VcK~W~~li~~-~~F~~~~~ 47 (366)
++.||+|++.+||+.||+++|++++.|||+|+.++.+ +...+.+.
T Consensus 15 ~~~lp~~~~~~i~~~l~~~~l~~~~~v~~~w~~~~~~~~~~w~~~~ 60 (464)
T 3v7d_B 15 ITSLPFEISLKIFNYLQFEDIINSLGVSQNWNKIIRKSTSLWKKLL 60 (464)
T ss_dssp HHHSCHHHHHHHHTTSCHHHHHHHHTTCHHHHHHHTTCHHHHHHHH
T ss_pred hHHCCHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHcCCHHHHHHHH
Confidence 4679999999999999999999999999999999998 76655544
No 18
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=98.72 E-value=3.8e-05 Score=72.14 Aligned_cols=47 Identities=23% Similarity=0.385 Sum_probs=42.9
Q ss_pred ccCCcHHHHHHHHhcCChhhhhhheechhhhhhhcCChHHHHHHHhh
Q 039662 3 VKYLSDDMMIETLSRLPVKSLMRFQCVCKSWYDLVKDPNFIYKHLKR 49 (366)
Q Consensus 3 ~~~LP~Dll~eIL~rLP~~sl~r~~~VcK~W~~li~~~~F~~~~~~~ 49 (366)
++.||+|++.+||+.|++++|++++.|||+|+.++.++.+.+.....
T Consensus 19 ~~~lp~e~~~~i~~~l~~~~l~~~~~v~~~~~~~~~~~~~w~~~~~~ 65 (445)
T 2ovr_B 19 ISLLPKELALYVLSFLEPKDLLQAAQTCRYWRILAEDNLLWREKCKE 65 (445)
T ss_dssp TTSSCHHHHHHHHTTSCHHHHHHHTTSCHHHHHHHTCSHHHHHHHTT
T ss_pred hHHCCHHHHHHHHHhCCHHHHHHHHHHhHHHHhhcCchhHhhhheee
Confidence 57899999999999999999999999999999999999988776543
No 19
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=98.51 E-value=1.1e-05 Score=73.86 Aligned_cols=149 Identities=10% Similarity=0.092 Sum_probs=88.6
Q ss_pred ceEEEEEcCCCceeecCCCccccceeecccceEEECceEEEEEecCC-C--ceEEEEEeC--CCceeeEeC-CCCCCCCC
Q 039662 180 SHVAVYKFSTNSWRDLEGFEMRYDYMVDRIFNVYLNGFCYWVVCRPD-Y--SKAILSFSM--SDEVFEEME-GPSVPQST 253 (366)
Q Consensus 180 ~~~~vyss~~~~W~~~~~~~~~~~~~~~~~~~v~~~G~lywl~~~~~-~--~~~Il~fD~--~~~~~~~i~-~P~~~~~~ 253 (366)
..+++|+..+++|+.++.++.+. ......+.++|.+|.++.... + ...+..||+ ++.+|+.+. +|....
T Consensus 168 ~~v~~yd~~~~~W~~~~~~p~~~---~~~~~~~~~~~~iyv~GG~~~~~~~~~~v~~~d~d~~~~~W~~~~~~~~~~~-- 242 (357)
T 2uvk_A 168 KFLLSFDPSTQQWSYAGESPWYG---TAGAAVVNKGDKTWLINGEAKPGLRTDAVFELDFTGNNLKWNKLAPVSSPDG-- 242 (357)
T ss_dssp CEEEEEETTTTEEEEEEECSSCC---CBSCEEEEETTEEEEECCEEETTEECCCEEEEECC---CEEEECCCSSTTTC--
T ss_pred ccEEEEeCCCCcEEECCCCCCCC---cccccEEEECCEEEEEeeecCCCcccCceEEEEecCCCCcEEecCCCCCCcc--
Confidence 48999999999999995333221 122466778999999964211 1 234777876 889998873 332211
Q ss_pred CccccccccceeeEecCeEEEEEeC--C----------------CCCEEEEEEee--CCeeeEEEEecCCCcceeeEEEe
Q 039662 254 TYYQSVKTPWMLGTYDDCLSLLYSD--S----------------FAHTFELWTMT--GGNWTKHSTFGPFIETYQPIGFW 313 (366)
Q Consensus 254 ~~~~~l~~~~~~~~~~G~L~~~~~~--~----------------~~~~~~IW~l~--~~~W~~~~~i~~~~~~~~~~~~~ 313 (366)
...... +..+|+|+++... . ....-++|+.+ ..+|+++-.++.... . ..++.
T Consensus 243 ~~~~~~------~~~~~~iyv~GG~~~~~~~~~~~~g~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~-~-~~~~~ 314 (357)
T 2uvk_A 243 VAGGFA------GISNDSLIFAGGAGFKGSRENYQNGKNYAHEGLKKSYSTDIHLWHNGKWDKSGELSQGRA-Y-GVSLP 314 (357)
T ss_dssp CBSCEE------EEETTEEEEECCEECTTHHHHHHTTCSSTTTTCCCEECCEEEECC---CEEEEECSSCCB-S-SEEEE
T ss_pred cccceE------EEECCEEEEEcCccccCCcccccccceeccccccceeeEEEEecCCCceeeCCCCCCCcc-c-ceeEE
Confidence 112234 7889999998421 1 11235678887 489999876654322 1 22233
Q ss_pred eCCeEEEEEc-------CCeEEEEECCCCeEEEEE
Q 039662 314 RKGEFFLESS-------DKRVVLYDSTYQEMRDIR 341 (366)
Q Consensus 314 ~~g~i~~~~~-------~~~~~~yd~~~~~~~~i~ 341 (366)
-++.|++... -..+..++++++++.+..
T Consensus 315 ~~~~i~v~GG~~~~~~~~~~v~~l~~~~~~~~~~~ 349 (357)
T 2uvk_A 315 WNNSLLIIGGETAGGKAVTDSVLITVKDNKVTVQN 349 (357)
T ss_dssp ETTEEEEEEEECGGGCEEEEEEEEEC-CCSCEEEC
T ss_pred eCCEEEEEeeeCCCCCEeeeEEEEEEcCcEeEeee
Confidence 4678777643 135888999999887643
No 20
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=98.49 E-value=3.1e-05 Score=72.60 Aligned_cols=47 Identities=32% Similarity=0.488 Sum_probs=41.2
Q ss_pred ccCCcHH----HHHHHHhcCChhhhhhheechhhhhhhcCChHHHHHHHhh
Q 039662 3 VKYLSDD----MMIETLSRLPVKSLMRFQCVCKSWYDLVKDPNFIYKHLKR 49 (366)
Q Consensus 3 ~~~LP~D----ll~eIL~rLP~~sl~r~~~VcK~W~~li~~~~F~~~~~~~ 49 (366)
++.||+| |+..||+.|++++|+++++|||+|+.++.++.+.+....+
T Consensus 11 ~~~lp~e~~~~~~~~i~~~l~~~~l~~~~~v~~~w~~~~~~~~~w~~~~~~ 61 (435)
T 1p22_A 11 ITALPARGLDHIAENILSYLDAKSLCAAELVCKEWYRVTSDGMLWKKLIER 61 (435)
T ss_dssp HHHTGGGTCHHHHHHHHTTCCHHHHHHHHHHCHHHHHHHHHTTHHHHHHHH
T ss_pred HHHCCcchHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcChHHHHHHHHh
Confidence 3679999 9999999999999999999999999999988776665443
No 21
>3l2o_B F-box only protein 4; small G protein fold, UBL conjugation pathway, ubiquitin Pro ligase, protein binding-cell cycle complex; 2.80A {Homo sapiens}
Probab=98.19 E-value=5.2e-07 Score=78.64 Aligned_cols=49 Identities=27% Similarity=0.335 Sum_probs=45.8
Q ss_pred ccCCcHHHHHHHHhcCChhhhhhheechhhhhhhcCChHHHHHHHhhcC
Q 039662 3 VKYLSDDMMIETLSRLPVKSLMRFQCVCKSWYDLVKDPNFIYKHLKRDN 51 (366)
Q Consensus 3 ~~~LP~Dll~eIL~rLP~~sl~r~~~VcK~W~~li~~~~F~~~~~~~~~ 51 (366)
++.||+|++..||+.|++++|+|+.+|||+||.++.++...+.+..+..
T Consensus 5 l~~LP~ei~l~IlsfL~p~DL~~l~~vcr~Wr~la~D~~LWr~~l~rd~ 53 (312)
T 3l2o_B 5 LTRLPIDVQLYILSFLSPHDLCQLGSTNHYWNETVRDPILWRYFLLRDL 53 (312)
T ss_dssp HHHSCHHHHHHHHHTSCHHHHHHHHTTCHHHHHHHTCHHHHHHHHHSSG
T ss_pred hHhCCHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhccchHHHHHHhccC
Confidence 5789999999999999999999999999999999999999988887764
No 22
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=97.90 E-value=0.00023 Score=70.65 Aligned_cols=218 Identities=11% Similarity=0.029 Sum_probs=120.7
Q ss_pred eeecceEEEeec--CCeEEEEeCCCcceeecCCCCCCCCCcccccceeeEEee-cCCCCCeEEEEEEeeecccCCCCCCc
Q 039662 103 GPYDGIFCLLKS--HTLINLWNVSLNEYRVIPECRPRLPLYTKTHYANVALGL-DPVTKDFKLVLILTLWNDHRDSFHDF 179 (366)
Q Consensus 103 ~s~~GLl~~~~~--~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~-d~~~~~ykvv~~~~~~~~~~~~~~~~ 179 (366)
...+|.|.+..+ ...+.++||.|++|..+|+.+..+ .. ..+..+ |. ||+.+... .+.....
T Consensus 250 ~~~~g~lyv~GG~~~~~v~~yd~~t~~W~~~~~~~~~R------~~-~s~~~~~dg-----~iyv~GG~----~~~~~~~ 313 (656)
T 1k3i_A 250 MDGNGQIVVTGGNDAKKTSLYDSSSDSWIPGPDMQVAR------GY-QSSATMSDG-----RVFTIGGS----WSGGVFE 313 (656)
T ss_dssp ECTTSCEEEECSSSTTCEEEEEGGGTEEEECCCCSSCC------SS-CEEEECTTS-----CEEEECCC----CCSSSCC
T ss_pred CCCCCCEEEeCCCCCCceEEecCcCCceeECCCCCccc------cc-cceEEecCC-----eEEEEeCc----ccCCccc
Confidence 345777766654 235999999999999998776532 11 122222 21 56666541 1212234
Q ss_pred ceEEEEEcCCCceeecCCCccccceeecccceEEECceEEEEEecCC------CceEEEEEeCCCceeeEe-CCCCC---
Q 039662 180 SHVAVYKFSTNSWRDLEGFEMRYDYMVDRIFNVYLNGFCYWVVCRPD------YSKAILSFSMSDEVFEEM-EGPSV--- 249 (366)
Q Consensus 180 ~~~~vyss~~~~W~~~~~~~~~~~~~~~~~~~v~~~G~lywl~~~~~------~~~~Il~fD~~~~~~~~i-~~P~~--- 249 (366)
..+++|+..++.|+.+......+.........+..+|.+|.+..... ....+..||+.++.|... ..+..
T Consensus 314 ~~~e~yd~~t~~W~~~~~~~~~p~~~~~~~~~~~~~~~iyv~Gg~~g~~~~~~~~~~v~~yd~~~~~w~~~~~~~~~~~~ 393 (656)
T 1k3i_A 314 KNGEVYSPSSKTWTSLPNAKVNPMLTADKQGLYRSDNHAWLFGWKKGSVFQAGPSTAMNWYYTSGSGDVKSAGKRQSNRG 393 (656)
T ss_dssp CCEEEEETTTTEEEEETTSCSGGGCCCCTTGGGTTTCSCCEEECGGGCEEECCSSSEEEEEECSTTCEEEEEEECEETTE
T ss_pred ccceEeCCCCCcceeCCCccccccccccccceeecCCceEEEECCCCcEEEecCccceeeeecCCcceeecCCccccccc
Confidence 57899999999999974221111111111233346788887764321 134689999999988542 11111
Q ss_pred -CCCCCccccccccceeeEecCeEEEEEeCC-------CCCEEEEEEee-C-CeeeEEE--EecCCCcceeeEEEeeCCe
Q 039662 250 -PQSTTYYQSVKTPWMLGTYDDCLSLLYSDS-------FAHTFELWTMT-G-GNWTKHS--TFGPFIETYQPIGFWRKGE 317 (366)
Q Consensus 250 -~~~~~~~~~l~~~~~~~~~~G~L~~~~~~~-------~~~~~~IW~l~-~-~~W~~~~--~i~~~~~~~~~~~~~~~g~ 317 (366)
.........+ ++-..+|+|+++.... ......|++.+ + ..|.+.. .++.. ...+-..+..+|+
T Consensus 394 ~~~~~~~~~av----~~~~~~~~i~v~GG~~~~~~~~~~~~~~~v~~yd~~~~~W~~~~~~~mp~~-R~~~~~~~l~~g~ 468 (656)
T 1k3i_A 394 VAPDAMCGNAV----MYDAVKGKILTFGGSPDYQDSDATTNAHIITLGEPGTSPNTVFASNGLYFA-RTFHTSVVLPDGS 468 (656)
T ss_dssp ECCCCBTCEEE----EEETTTTEEEEECCBSSSSSSBCCCCEEEEECCSTTSCCEEEECTTCCSSC-CBSCEEEECTTSC
T ss_pred cCCCCCCCceE----eccCCCCeEEEEeCCCCCCCCCcCCcceEEEcCCCCCCCeeEEccCCCCCC-cccCCeEECCCCC
Confidence 0000000110 0002489998884311 11223566666 3 7898765 33322 2223333345788
Q ss_pred EEEEEc------------CCeEEEEECCCCeEEEEE
Q 039662 318 FFLESS------------DKRVVLYDSTYQEMRDIR 341 (366)
Q Consensus 318 i~~~~~------------~~~~~~yd~~~~~~~~i~ 341 (366)
|++... -..+..||+++++|+.+.
T Consensus 469 i~v~GG~~~~~~~~~~~~~~~v~~ydp~t~~W~~~~ 504 (656)
T 1k3i_A 469 TFITGGQRRGIPFEDSTPVFTPEIYVPEQDTFYKQN 504 (656)
T ss_dssp EEEECCBSBCCTTCCCSBCCCCEEEEGGGTEEEECC
T ss_pred EEEECCcccCcCcCCCCcccceEEEcCCCCceeecC
Confidence 887653 145899999999998754
No 23
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=97.80 E-value=0.00054 Score=68.03 Aligned_cols=194 Identities=11% Similarity=0.080 Sum_probs=107.7
Q ss_pred eEEEEeCCCcceeecCCCCCCCCCcccccceeeEEeecCCCCCeEEEEEEeeecccCCCCCCcceEEEEEcCCCceeecC
Q 039662 117 LINLWNVSLNEYRVIPECRPRLPLYTKTHYANVALGLDPVTKDFKLVLILTLWNDHRDSFHDFSHVAVYKFSTNSWRDLE 196 (366)
Q Consensus 117 ~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~~vyss~~~~W~~~~ 196 (366)
.+.++||.|++|..++..+.... ......++..|. +++.+.. ... ..+++|+..++.|+.+.
T Consensus 220 ~~~~yd~~t~~w~~~~~~~~~~~----~~~~~~~~~~~g-----~lyv~GG----~~~-----~~v~~yd~~t~~W~~~~ 281 (656)
T 1k3i_A 220 LTSSWDPSTGIVSDRTVTVTKHD----MFCPGISMDGNG-----QIVVTGG----NDA-----KKTSLYDSSSDSWIPGP 281 (656)
T ss_dssp EEEEECTTTCCBCCCEEEECSCC----CSSCEEEECTTS-----CEEEECS----SST-----TCEEEEEGGGTEEEECC
T ss_pred EEEEEeCCCCcEEeCcccCCCCC----CccccccCCCCC-----CEEEeCC----CCC-----CceEEecCcCCceeECC
Confidence 48899999999999876543211 111112222221 4555543 111 27899999999999996
Q ss_pred CCccccceeecccceEEE-CceEEEEEecCCC---ceEEEEEeCCCceeeEeCC----CCCCCCCCccccccccceeeEe
Q 039662 197 GFEMRYDYMVDRIFNVYL-NGFCYWVVCRPDY---SKAILSFSMSDEVFEEMEG----PSVPQSTTYYQSVKTPWMLGTY 268 (366)
Q Consensus 197 ~~~~~~~~~~~~~~~v~~-~G~lywl~~~~~~---~~~Il~fD~~~~~~~~i~~----P~~~~~~~~~~~l~~~~~~~~~ 268 (366)
.++.++ .....+.+ +|.+|.++...++ ...+-.||+.+++|+.++. |..... . ..+ ...
T Consensus 282 ~~~~~R----~~~s~~~~~dg~iyv~GG~~~~~~~~~~~e~yd~~t~~W~~~~~~~~~p~~~~~-~--~~~------~~~ 348 (656)
T 1k3i_A 282 DMQVAR----GYQSSATMSDGRVFTIGGSWSGGVFEKNGEVYSPSSKTWTSLPNAKVNPMLTAD-K--QGL------YRS 348 (656)
T ss_dssp CCSSCC----SSCEEEECTTSCEEEECCCCCSSSCCCCEEEEETTTTEEEEETTSCSGGGCCCC-T--TGG------GTT
T ss_pred CCCccc----cccceEEecCCeEEEEeCcccCCcccccceEeCCCCCcceeCCCcccccccccc-c--cce------eec
Confidence 333221 12445666 9999999852121 2458999999999998731 111111 1 122 334
Q ss_pred cCeEEEEEeC-------CCCCEEEEEEeeCCeeeEEEEecCC------Ccc-eeeEEE-eeCCeEEEEEcC---------
Q 039662 269 DDCLSLLYSD-------SFAHTFELWTMTGGNWTKHSTFGPF------IET-YQPIGF-WRKGEFFLESSD--------- 324 (366)
Q Consensus 269 ~G~L~~~~~~-------~~~~~~~IW~l~~~~W~~~~~i~~~------~~~-~~~~~~-~~~g~i~~~~~~--------- 324 (366)
+++++++... .....++.|-.+...|......... ... ...+.+ ..+++|++....
T Consensus 349 ~~~iyv~Gg~~g~~~~~~~~~~v~~yd~~~~~w~~~~~~~~~~~~~~~~~~~~~av~~~~~~~~i~v~GG~~~~~~~~~~ 428 (656)
T 1k3i_A 349 DNHAWLFGWKKGSVFQAGPSTAMNWYYTSGSGDVKSAGKRQSNRGVAPDAMCGNAVMYDAVKGKILTFGGSPDYQDSDAT 428 (656)
T ss_dssp TCSCCEEECGGGCEEECCSSSEEEEEECSTTCEEEEEEECEETTEECCCCBTCEEEEEETTTTEEEEECCBSSSSSSBCC
T ss_pred CCceEEEECCCCcEEEecCccceeeeecCCcceeecCCccccccccCCCCCCCceEeccCCCCeEEEEeCCCCCCCCCcC
Confidence 5666555321 1233444444444566543322211 011 111211 136788777431
Q ss_pred C---eEEEEECCCCeEEEEE
Q 039662 325 K---RVVLYDSTYQEMRDIR 341 (366)
Q Consensus 325 ~---~~~~yd~~~~~~~~i~ 341 (366)
. .+..||+++++|.++.
T Consensus 429 ~~~~~v~~yd~~~~~W~~~~ 448 (656)
T 1k3i_A 429 TNAHIITLGEPGTSPNTVFA 448 (656)
T ss_dssp CCEEEEECCSTTSCCEEEEC
T ss_pred CcceEEEcCCCCCCCeeEEc
Confidence 1 6889999999998874
No 24
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=97.77 E-value=0.00037 Score=69.69 Aligned_cols=170 Identities=6% Similarity=-0.022 Sum_probs=104.2
Q ss_pred CcceEEEEEcCCCceeecC-CCc---cccceeecccceEEE--CceEEEEEecCCC---ceEEEEEeCCCceeeEe-CCC
Q 039662 178 DFSHVAVYKFSTNSWRDLE-GFE---MRYDYMVDRIFNVYL--NGFCYWVVCRPDY---SKAILSFSMSDEVFEEM-EGP 247 (366)
Q Consensus 178 ~~~~~~vyss~~~~W~~~~-~~~---~~~~~~~~~~~~v~~--~G~lywl~~~~~~---~~~Il~fD~~~~~~~~i-~~P 247 (366)
....+.+|+..++.|+.+. .++ ++.. ......+.+ +|.+|.++..... ...+..||+.+.+|+.+ ++|
T Consensus 410 ~~~~v~~yd~~~~~W~~~~~~~p~~~~p~~--R~~hs~~~~~~~~~lyv~GG~~~~~~~~~dv~~yd~~t~~W~~~~~~p 487 (695)
T 2zwa_A 410 RVNEILQLSIHYDKIDMKNIEVSSSEVPVA--RMCHTFTTISRNNQLLLIGGRKAPHQGLSDNWIFDMKTREWSMIKSLS 487 (695)
T ss_dssp BCCCEEEEEECSSCEEEEECCCCCSCCCCC--CBSCEEEEETTTTEEEEECCBSSTTCBCCCCEEEETTTTEEEECCCCS
T ss_pred CcCcEEEEECCCCeEEEeccCCCCCCCCcc--ccceEEEEEccCCEEEEEcCCCCCCCccccEEEEeCCCCcEEECCCCC
Confidence 3447899999999999984 221 2211 123566778 9999999854321 24589999999999988 344
Q ss_pred CCCCCCCccccccccceeeEe-cCeEEEEEeCCCCCEEEEEEee--CCeeeEEEEecCC--Ccceee-EEEeeC-CeEEE
Q 039662 248 SVPQSTTYYQSVKTPWMLGTY-DDCLSLLYSDSFAHTFELWTMT--GGNWTKHSTFGPF--IETYQP-IGFWRK-GEFFL 320 (366)
Q Consensus 248 ~~~~~~~~~~~l~~~~~~~~~-~G~L~~~~~~~~~~~~~IW~l~--~~~W~~~~~i~~~--~~~~~~-~~~~~~-g~i~~ 320 (366)
.... .... +.. +|+|+++....... ++|+.+ ...|+........ ....+. +.+..+ +.|++
T Consensus 488 ~~R~----~h~~------~~~~~~~iyv~GG~~~~~--~v~~yd~~t~~W~~~~~~g~~p~~r~~~~a~v~~~~~~~iyv 555 (695)
T 2zwa_A 488 HTRF----RHSA------CSLPDGNVLILGGVTEGP--AMLLYNVTEEIFKDVTPKDEFFQNSLVSAGLEFDPVSKQGII 555 (695)
T ss_dssp BCCB----SCEE------EECTTSCEEEECCBCSSC--SEEEEETTTTEEEECCCSSGGGGSCCBSCEEEEETTTTEEEE
T ss_pred CCcc----cceE------EEEcCCEEEEECCCCCCC--CEEEEECCCCceEEccCCCCCCCcccceeEEEEeCCCCEEEE
Confidence 3221 1233 554 99999985432223 888888 4899987653211 111222 222333 67777
Q ss_pred EEc--------CCeEEEEECCCCe------EEEEEEe-CcE---EEEEEee-ecccccCC
Q 039662 321 ESS--------DKRVVLYDSTYQE------MRDIRIT-GLW---FTVHVLK-ESLIRLKE 361 (366)
Q Consensus 321 ~~~--------~~~~~~yd~~~~~------~~~i~~~-~~~---~~~~~y~-~slv~~~~ 361 (366)
... ...+..||+++++ |+.+.-. ... ..++.+. ..|.-+.+
T Consensus 556 ~GG~~~~~~~~~~~v~~yd~~~~~w~~~~~W~~~~~~p~~~R~~~~~~~~~~~~iyv~GG 615 (695)
T 2zwa_A 556 LGGGFMDQTTVSDKAIIFKYDAENATEPITVIKKLQHPLFQRYGSQIKYITPRKLLIVGG 615 (695)
T ss_dssp ECCBCTTSSCBCCEEEEEEECTTCSSCCEEEEEEEECGGGCCBSCEEEEEETTEEEEECC
T ss_pred ECCcCCCCCeeeCcEEEEEccCCccccceEEEEcCCCCCCCcccceEEEeCCCEEEEECC
Confidence 643 1469999999999 7777541 111 3455555 45544443
No 25
>2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A
Probab=97.63 E-value=2.1e-05 Score=71.15 Aligned_cols=40 Identities=30% Similarity=0.649 Sum_probs=37.0
Q ss_pred ccCCcHHHHHHHHhcCChhhhhhheechhhhhhhcCChHH
Q 039662 3 VKYLSDDMMIETLSRLPVKSLMRFQCVCKSWYDLVKDPNF 42 (366)
Q Consensus 3 ~~~LP~Dll~eIL~rLP~~sl~r~~~VcK~W~~li~~~~F 42 (366)
++.||+|++.+||.+|+.+++.+++.|||+|+.++.+|..
T Consensus 9 ~~~LP~eil~~If~~L~~~d~~~~~~vc~~W~~~~~~~~~ 48 (336)
T 2ast_B 9 WDSLPDELLLGIFSCLCLPELLKVSGVCKRWYRLASDESL 48 (336)
T ss_dssp SSSSCHHHHHHHHTTSCHHHHHHTTSSCHHHHHHHTCSTT
T ss_pred hhhCCHHHHHHHHHhCCHHHHHHHHHHHHHHHHHhcCchh
Confidence 6899999999999999999999999999999999876653
No 26
>2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B*
Probab=97.16 E-value=0.00013 Score=71.25 Aligned_cols=34 Identities=24% Similarity=0.514 Sum_probs=29.5
Q ss_pred ccCCcHHHHHHHHhcCC-hhhhhhheechhhhhhh
Q 039662 3 VKYLSDDMMIETLSRLP-VKSLMRFQCVCKSWYDL 36 (366)
Q Consensus 3 ~~~LP~Dll~eIL~rLP-~~sl~r~~~VcK~W~~l 36 (366)
++.||||++.+||.+|| .+++.+++.|||+|+.+
T Consensus 6 ~~~LPdevL~~If~~L~~~~d~~~~s~vck~W~~~ 40 (594)
T 2p1m_B 6 ALSFPEEVLEHVFSFIQLDKDRNSVSLVCKSWYEI 40 (594)
T ss_dssp ----CHHHHHHHHHTCCCHHHHHHHHTSCHHHHHH
T ss_pred hhhCCHHHHHHHHhhcCCchhHHHHHHHHHHHHHh
Confidence 57899999999999999 99999999999999988
No 27
>3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B*
Probab=96.84 E-value=0.00038 Score=67.99 Aligned_cols=33 Identities=18% Similarity=0.443 Sum_probs=31.5
Q ss_pred cCCcHHHHHHHHhcC-Chhhhhhheechhhhhhh
Q 039662 4 KYLSDDMMIETLSRL-PVKSLMRFQCVCKSWYDL 36 (366)
Q Consensus 4 ~~LP~Dll~eIL~rL-P~~sl~r~~~VcK~W~~l 36 (366)
+.||||++.+||.+| |.+++.+++.|||+|+.+
T Consensus 14 ~~LPdeil~~I~~~L~~~~d~~~~s~vck~W~~~ 47 (592)
T 3ogk_B 14 VATVDDVIEQVMTYITDPKDRDSASLVCRRWFKI 47 (592)
T ss_dssp CCCGGGTHHHHHTTCCCHHHHHHHTTSCHHHHHH
T ss_pred CCCCHHHHHHHHHhcCCHHHHHHHHHHhHHHHHh
Confidence 579999999999999 899999999999999987
No 28
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=94.86 E-value=1.6 Score=37.18 Aligned_cols=190 Identities=8% Similarity=-0.050 Sum_probs=95.2
Q ss_pred eeecceEEEeec-CCeEEEEeCCCcceeecCCCCCCCCCcccccceeeEEeecCCCCCeEEEEEEeeecccCCCCCCcce
Q 039662 103 GPYDGIFCLLKS-HTLINLWNVSLNEYRVIPECRPRLPLYTKTHYANVALGLDPVTKDFKLVLILTLWNDHRDSFHDFSH 181 (366)
Q Consensus 103 ~s~~GLl~~~~~-~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~~~~~ 181 (366)
...+|.+.+... ...++++|| +++...+..+.. .....++.+|+... +. +.. . ..-.
T Consensus 106 ~~~~g~l~v~~~~~~~i~~~d~-~g~~~~~~~~~~--------~~~~~~i~~~~~g~---l~-v~~------~---~~~~ 163 (299)
T 2z2n_A 106 EGPNGDIWFTEMNGNRIGRITD-DGKIREYELPNK--------GSYPSFITLGSDNA---LW-FTE------N---QNNA 163 (299)
T ss_dssp ECTTSCEEEEETTTTEEEEECT-TCCEEEEECSST--------TCCEEEEEECTTSC---EE-EEE------T---TTTE
T ss_pred ECCCCCEEEEecCCceEEEECC-CCCEEEecCCCC--------CCCCceEEEcCCCC---EE-EEe------C---CCCE
Confidence 344677766653 456999999 777665533211 11235677776532 22 222 0 1125
Q ss_pred EEEEEcCCCceeecCCCccccceeecccceEEE--CceEEEEEecCCCceEEEEEeCCCceeeEeCCCCCCCCCCccccc
Q 039662 182 VAVYKFSTNSWRDLEGFEMRYDYMVDRIFNVYL--NGFCYWVVCRPDYSKAILSFSMSDEVFEEMEGPSVPQSTTYYQSV 259 (366)
Q Consensus 182 ~~vyss~~~~W~~~~~~~~~~~~~~~~~~~v~~--~G~lywl~~~~~~~~~Il~fD~~~~~~~~i~~P~~~~~~~~~~~l 259 (366)
+.+|+. ++..+... .+.... ...++.+ +|.+|+.. .....|..+|. ++++..+.+|.... ....+
T Consensus 164 i~~~~~-~g~~~~~~-~~~~~~----~~~~i~~~~~g~l~v~~---~~~~~i~~~~~-~g~~~~~~~~~~~~---~~~~i 230 (299)
T 2z2n_A 164 IGRITE-SGDITEFK-IPTPAS----GPVGITKGNDDALWFVE---IIGNKIGRITT-SGEITEFKIPTPNA---RPHAI 230 (299)
T ss_dssp EEEECT-TCCEEEEE-CSSTTC----CEEEEEECTTSSEEEEE---TTTTEEEEECT-TCCEEEEECSSTTC---CEEEE
T ss_pred EEEEcC-CCcEEEee-CCCCCC----cceeEEECCCCCEEEEc---cCCceEEEECC-CCcEEEEECCCCCC---CceeE
Confidence 667777 66655431 111111 1123333 57876553 22347999999 77777666653221 11122
Q ss_pred cccceeeE-ecCeEEEEEeCCCCCEEEEEEeeCCeeeEEEEecCCCcceeeEEEeeCCeEEEEEcCCeEEEEECCCCeEE
Q 039662 260 KTPWMLGT-YDDCLSLLYSDSFAHTFELWTMTGGNWTKHSTFGPFIETYQPIGFWRKGEFFLESSDKRVVLYDSTYQEMR 338 (366)
Q Consensus 260 ~~~~~~~~-~~G~L~~~~~~~~~~~~~IW~l~~~~W~~~~~i~~~~~~~~~~~~~~~g~i~~~~~~~~~~~yd~~~~~~~ 338 (366)
.. -+|.|.+... ....+.+|-. ...- ..+.++.......-+.+ .+|.+++....+.+..||+++++++
T Consensus 231 ------~~~~~g~l~v~~~--~~~~i~~~d~-~g~~-~~~~~~~~~~~~~~i~~-~~g~l~v~~~~~~l~~~~~~~~~~~ 299 (299)
T 2z2n_A 231 ------TAGAGIDLWFTEW--GANKIGRLTS-NNII-EEYPIQIKSAEPHGICF-DGETIWFAMECDKIGKLTLIKDNME 299 (299)
T ss_dssp ------EECSTTCEEEEET--TTTEEEEEET-TTEE-EEEECSSSSCCEEEEEE-CSSCEEEEETTTEEEEEEEC-----
T ss_pred ------EECCCCCEEEecc--CCceEEEECC-CCce-EEEeCCCCCCccceEEe-cCCCEEEEecCCcEEEEEcCcccCC
Confidence 22 3577766653 2344444433 2221 12222211122233445 6788888866789999999988654
No 29
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=94.58 E-value=2.3 Score=37.56 Aligned_cols=65 Identities=6% Similarity=0.195 Sum_probs=42.7
Q ss_pred cCeEEEEEeCCCCCEEEEEEee-C-CeeeEEEEecCCCcceeeEEEeeC---CeEEEEE-cCCeEEEEECCCC
Q 039662 269 DDCLSLLYSDSFAHTFELWTMT-G-GNWTKHSTFGPFIETYQPIGFWRK---GEFFLES-SDKRVVLYDSTYQ 335 (366)
Q Consensus 269 ~G~L~~~~~~~~~~~~~IW~l~-~-~~W~~~~~i~~~~~~~~~~~~~~~---g~i~~~~-~~~~~~~yd~~~~ 335 (366)
+|.+.+... ....+.||-+. + ..|.....+........-+.+..+ +.+++.. .++.+..||++++
T Consensus 171 ~~~~l~~~~--~dg~i~i~d~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~dg~i~iwd~~~~ 241 (379)
T 3jrp_A 171 ESRKFVTGG--ADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYLASVSQDRTCIIWTQDNE 241 (379)
T ss_dssp TTCEEEEEE--TTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEETTSCEEEEEESST
T ss_pred CCCEEEEEe--CCCeEEEEEecCCCcceeeEEEEecccCcEeEEEECCCCCCCCeEEEEeCCCEEEEEeCCCC
Confidence 466555554 45689999988 4 677777776643333344555666 6665554 4788999998876
No 30
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=93.52 E-value=3.9 Score=40.79 Aligned_cols=65 Identities=6% Similarity=0.195 Sum_probs=42.0
Q ss_pred cCeEEEEEeCCCCCEEEEEEee-C-CeeeEEEEecCCCcceeeEEEeeC---CeEEEEE-cCCeEEEEECCCC
Q 039662 269 DDCLSLLYSDSFAHTFELWTMT-G-GNWTKHSTFGPFIETYQPIGFWRK---GEFFLES-SDKRVVLYDSTYQ 335 (366)
Q Consensus 269 ~G~L~~~~~~~~~~~~~IW~l~-~-~~W~~~~~i~~~~~~~~~~~~~~~---g~i~~~~-~~~~~~~yd~~~~ 335 (366)
+|.+.+... ....+.||-+. + ..+.....+........-+.+..+ +.+++.. .++.+..||++++
T Consensus 169 d~~~l~sgs--~dg~I~iwd~~~~~~~~~~~~~~~~h~~~V~~l~~sp~~~~~~~l~s~s~Dg~I~iwd~~~~ 239 (753)
T 3jro_A 169 ESRKFVTGG--ADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYLASVSQDRTCIIWTQDNE 239 (753)
T ss_dssp GGCCEEEEE--TTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEESSSCEEEEEESSS
T ss_pred CCCEEEEEE--CCCeEEEEeccCCcccceeeeeecCCCCcEEEEEeccCCCCCCEEEEEecCCEEEEecCCCC
Confidence 355555544 45689999988 4 667777666643333334455566 6666554 4788999998875
No 31
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=92.10 E-value=5.8 Score=34.81 Aligned_cols=199 Identities=6% Similarity=0.026 Sum_probs=103.4
Q ss_pred cceEEEeec-----CCeEEEEeCCCcceee-cCCCCCCCCCcccccceeeEEeecCCCCCeEEEEEEeeecccCCCCCCc
Q 039662 106 DGIFCLLKS-----HTLINLWNVSLNEYRV-IPECRPRLPLYTKTHYANVALGLDPVTKDFKLVLILTLWNDHRDSFHDF 179 (366)
Q Consensus 106 ~GLl~~~~~-----~~~~~V~NP~T~~~~~-LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~~~ 179 (366)
+|+..+..+ +..+.++||.|++... ++......+ ......++.++. + ++..... ..
T Consensus 2 ~g~~v~neg~~g~~~~~l~~~d~~t~~~~~~i~~~~n~~~----lg~~~~~i~~~~---~-~lyv~~~----------~~ 63 (328)
T 3dsm_A 2 SGLFITNEGNFQYSNATLSYYDPATCEVENEVFYRANGFK----LGDVAQSMVIRD---G-IGWIVVN----------NS 63 (328)
T ss_dssp CEEEEEECCCTTSCCBEEEEEETTTTEEECSHHHHHHSSC----CBSCEEEEEEET---T-EEEEEEG----------GG
T ss_pred CeEEEEecCCCCCCCceEEEEECCCCEEhhhhHhhhcCcc----cCccceEEEEEC---C-EEEEEEc----------CC
Confidence 455555554 4469999999998764 211000000 011113344443 2 3333322 11
Q ss_pred ceEEEEEcCCCce-eecCCCccccceeecccceEE-ECceEEEEEecCCCceEEEEEeCCCceee-EeCCCCCCCCCCcc
Q 039662 180 SHVAVYKFSTNSW-RDLEGFEMRYDYMVDRIFNVY-LNGFCYWVVCRPDYSKAILSFSMSDEVFE-EMEGPSVPQSTTYY 256 (366)
Q Consensus 180 ~~~~vyss~~~~W-~~~~~~~~~~~~~~~~~~~v~-~~G~lywl~~~~~~~~~Il~fD~~~~~~~-~i~~P~~~~~~~~~ 256 (366)
-.+.+++..+++- +.+ +..... ..-+. -+|.+|.... ....|..+|+++.+.. .++.+.........
T Consensus 64 ~~v~viD~~t~~~~~~i---~~~~~p----~~i~~~~~g~lyv~~~---~~~~v~~iD~~t~~~~~~i~~g~~~~~~~~p 133 (328)
T 3dsm_A 64 HVIFAIDINTFKEVGRI---TGFTSP----RYIHFLSDEKAYVTQI---WDYRIFIINPKTYEITGYIECPDMDMESGST 133 (328)
T ss_dssp TEEEEEETTTCCEEEEE---ECCSSE----EEEEEEETTEEEEEEB---SCSEEEEEETTTTEEEEEEECTTCCTTTCBC
T ss_pred CEEEEEECcccEEEEEc---CCCCCC----cEEEEeCCCeEEEEEC---CCCeEEEEECCCCeEEEEEEcCCccccCCCc
Confidence 2788899887754 223 111110 11122 5788877642 2357999999998764 56665421111111
Q ss_pred ccccccceeeEecCeEEEEEeCCCCCEEEEEEeeCCeeeEEEEecCCCcceeeEEEeeCCeEEEEEcC-----------C
Q 039662 257 QSVKTPWMLGTYDDCLSLLYSDSFAHTFELWTMTGGNWTKHSTFGPFIETYQPIGFWRKGEFFLESSD-----------K 325 (366)
Q Consensus 257 ~~l~~~~~~~~~~G~L~~~~~~~~~~~~~IW~l~~~~W~~~~~i~~~~~~~~~~~~~~~g~i~~~~~~-----------~ 325 (366)
..+ ...+|+|++.... ....+.++-++..+..+...+.. ...-+.+..+|.+++.... .
T Consensus 134 ~~i------~~~~~~lyv~~~~-~~~~v~viD~~t~~~~~~i~~g~---~p~~i~~~~dG~l~v~~~~~~~~~~~~~~~~ 203 (328)
T 3dsm_A 134 EQM------VQYGKYVYVNCWS-YQNRILKIDTETDKVVDELTIGI---QPTSLVMDKYNKMWTITDGGYEGSPYGYEAP 203 (328)
T ss_dssp CCE------EEETTEEEEEECT-TCCEEEEEETTTTEEEEEEECSS---CBCCCEECTTSEEEEEBCCBCTTCSSCBCCC
T ss_pred ceE------EEECCEEEEEcCC-CCCEEEEEECCCCeEEEEEEcCC---CccceEEcCCCCEEEEECCCccCCccccCCc
Confidence 233 5567888877531 23444444333333333332221 1233455677888777543 5
Q ss_pred eEEEEECCCCeEEE-EEE
Q 039662 326 RVVLYDSTYQEMRD-IRI 342 (366)
Q Consensus 326 ~~~~yd~~~~~~~~-i~~ 342 (366)
.+..+|++++++.. +.+
T Consensus 204 ~v~~id~~t~~v~~~~~~ 221 (328)
T 3dsm_A 204 SLYRIDAETFTVEKQFKF 221 (328)
T ss_dssp EEEEEETTTTEEEEEEEC
T ss_pred eEEEEECCCCeEEEEEec
Confidence 89999999988764 444
No 32
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=90.43 E-value=8.5 Score=33.61 Aligned_cols=115 Identities=10% Similarity=0.040 Sum_probs=64.1
Q ss_pred CceEEEEEecCCCceEEEEEeCCCceeeEeCC-CCCCCCCCccccccccceeeEecCe-EEEEEeCCCCCEEEEEEee-C
Q 039662 215 NGFCYWVVCRPDYSKAILSFSMSDEVFEEMEG-PSVPQSTTYYQSVKTPWMLGTYDDC-LSLLYSDSFAHTFELWTMT-G 291 (366)
Q Consensus 215 ~G~lywl~~~~~~~~~Il~fD~~~~~~~~i~~-P~~~~~~~~~~~l~~~~~~~~~~G~-L~~~~~~~~~~~~~IW~l~-~ 291 (366)
+|.+|..... .+...|..||+.+++.+.+.. +.... . ...+ ...-+|+ |++... ....+.+|-++ +
T Consensus 50 dg~l~~~~~~-~~~~~v~~~~~~~g~~~~~~~~~~~~~-~--p~~~-----a~spdg~~l~~~~~--~~~~v~v~~~~~~ 118 (347)
T 3hfq_A 50 KDCLYSVDKE-DDEGGIAAWQIDGQTAHKLNTVVAPGT-P--PAYV-----AVDEARQLVYSANY--HKGTAEVMKIAAD 118 (347)
T ss_dssp TCEEEEEEEE-TTEEEEEEEEEETTEEEEEEEEEEESC-C--CSEE-----EEETTTTEEEEEET--TTTEEEEEEECTT
T ss_pred CCeEEEEEec-CCCceEEEEEecCCcEEEeeeeecCCC-C--CEEE-----EECCCCCEEEEEeC--CCCEEEEEEeCCC
Confidence 7887776521 224579999998877665532 21111 1 1112 1334676 444443 45789999997 4
Q ss_pred CeeeEEEEecCCC---------cceeeEEEeeCCeEEEEEc-CCeEEEEECC-CCeEEEE
Q 039662 292 GNWTKHSTFGPFI---------ETYQPIGFWRKGEFFLESS-DKRVVLYDST-YQEMRDI 340 (366)
Q Consensus 292 ~~W~~~~~i~~~~---------~~~~~~~~~~~g~i~~~~~-~~~~~~yd~~-~~~~~~i 340 (366)
+.......+.... ....-+.+..+|++++... ++.+..||++ ++++..+
T Consensus 119 g~~~~~~~~~~~~~~p~~~~~~~~~~~~~~spdg~l~v~~~~~~~v~~~~~~~~g~~~~~ 178 (347)
T 3hfq_A 119 GALTLTDTVQHSGHGPRPEQDGSHIHYTDLTPDNRLAVIDLGSDKVYVYNVSDAGQLSEQ 178 (347)
T ss_dssp SCEEEEEEEECCCCCSSTTCSSCCEEEEEECTTSCEEEEETTTTEEEEEEECTTSCEEEE
T ss_pred CCeeecceeecCCCCCCccccCCCceEEEECCCCcEEEEeCCCCEEEEEEECCCCcEEEe
Confidence 4444444443210 0122356667788555443 6689999988 6666543
No 33
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=90.25 E-value=7.9 Score=33.00 Aligned_cols=200 Identities=8% Similarity=0.002 Sum_probs=104.8
Q ss_pred eeecc-eEEEeecCCeEEEEeCCCcceeecCCCCCCCCCcccccceeeEEeecCCCCCeEEEEEEeeecccCCCCCCcce
Q 039662 103 GPYDG-IFCLLKSHTLINLWNVSLNEYRVIPECRPRLPLYTKTHYANVALGLDPVTKDFKLVLILTLWNDHRDSFHDFSH 181 (366)
Q Consensus 103 ~s~~G-Ll~~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~~~~~ 181 (366)
++.+. ++......+.++++||.++ ...+..... ...++.+|+..+ ++ +.. . ..-.
T Consensus 36 d~~g~~l~~~~~~~~~i~~~~~~~~-~~~~~~~~~----------~~~~l~~~~dg~---l~-v~~------~---~~~~ 91 (296)
T 3e5z_A 36 VPARSAVIFSDVRQNRTWAWSDDGQ-LSPEMHPSH----------HQNGHCLNKQGH---LI-ACS------H---GLRR 91 (296)
T ss_dssp EGGGTEEEEEEGGGTEEEEEETTSC-EEEEESSCS----------SEEEEEECTTCC---EE-EEE------T---TTTE
T ss_pred eCCCCEEEEEeCCCCEEEEEECCCC-eEEEECCCC----------CcceeeECCCCc---EE-EEe------c---CCCe
Confidence 44444 4444444556999999998 555543221 235777877543 32 222 1 1126
Q ss_pred EEEEEcCCCceeecCCCccccceeecccceEEE--CceEEEEEe---c-----------CCCceEEEEEeCCCceeeEeC
Q 039662 182 VAVYKFSTNSWRDLEGFEMRYDYMVDRIFNVYL--NGFCYWVVC---R-----------PDYSKAILSFSMSDEVFEEME 245 (366)
Q Consensus 182 ~~vyss~~~~W~~~~~~~~~~~~~~~~~~~v~~--~G~lywl~~---~-----------~~~~~~Il~fD~~~~~~~~i~ 245 (366)
+.+|+..++..+.+.. ............+.+ +|.+|.... . ..+...|..+|.. ++...+.
T Consensus 92 i~~~d~~~g~~~~~~~--~~~~~~~~~~~~i~~d~~G~l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~~~~ 168 (296)
T 3e5z_A 92 LERQREPGGEWESIAD--SFEGKKLNSPNDVCLAPDGSLWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAPD-GTLSAPI 168 (296)
T ss_dssp EEEECSTTCCEEEEEC--EETTEECCCCCCEEECTTSCEEEEECSHHHHCGGGSSCCCCCSSSCEEEEECTT-SCEEEEE
T ss_pred EEEEcCCCCcEEEEee--ccCCCCCCCCCCEEECCCCCEEEECCccccccccccccccccCCCcEEEEECCC-CCEEEee
Confidence 7888887887765521 100110111122332 687766421 0 0113479999987 5555442
Q ss_pred CCCCCCCCCccccccccceeeEecCeEEEEEeCCCCCEEEEEEee-CCee-eEEEEecCCCcceeeEEEeeCCeEEEEEc
Q 039662 246 GPSVPQSTTYYQSVKTPWMLGTYDDCLSLLYSDSFAHTFELWTMT-GGNW-TKHSTFGPFIETYQPIGFWRKGEFFLESS 323 (366)
Q Consensus 246 ~P~~~~~~~~~~~l~~~~~~~~~~G~L~~~~~~~~~~~~~IW~l~-~~~W-~~~~~i~~~~~~~~~~~~~~~g~i~~~~~ 323 (366)
-.... ...+ ...-+|++. +.. .....+.+|-++ +... .....+........-+.+..+|.+++..
T Consensus 169 ~~~~~-----~~gi-----~~s~dg~~l-v~~-~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~p~~i~~d~~G~l~v~~- 235 (296)
T 3e5z_A 169 RDRVK-----PNGL-----AFLPSGNLL-VSD-TGDNATHRYCLNARGETEYQGVHFTVEPGKTDGLRVDAGGLIWASA- 235 (296)
T ss_dssp CCCSS-----EEEE-----EECTTSCEE-EEE-TTTTEEEEEEECSSSCEEEEEEEECCSSSCCCSEEEBTTSCEEEEE-
T ss_pred cCCCC-----CccE-----EECCCCCEE-EEe-CCCCeEEEEEECCCCcCcCCCeEeeCCCCCCCeEEECCCCCEEEEc-
Confidence 11110 1112 122367655 433 245677777776 3444 3233332111222345666778888877
Q ss_pred CCeEEEEECCCCeEEEEEE
Q 039662 324 DKRVVLYDSTYQEMRDIRI 342 (366)
Q Consensus 324 ~~~~~~yd~~~~~~~~i~~ 342 (366)
++.+..||++.+.++.+..
T Consensus 236 ~~~v~~~~~~g~~~~~~~~ 254 (296)
T 3e5z_A 236 GDGVHVLTPDGDELGRVLT 254 (296)
T ss_dssp TTEEEEECTTSCEEEEEEC
T ss_pred CCeEEEECCCCCEEEEEEC
Confidence 8899999999877777664
No 34
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=89.21 E-value=9.9 Score=32.62 Aligned_cols=200 Identities=8% Similarity=0.085 Sum_probs=100.3
Q ss_pred eeecceEEEee-cCCeEEEEeCCCcceeecCCCCCCCCCcccccceeeEEeecCCCCCeEEEEEEeeecccCCCCCCcce
Q 039662 103 GPYDGIFCLLK-SHTLINLWNVSLNEYRVIPECRPRLPLYTKTHYANVALGLDPVTKDFKLVLILTLWNDHRDSFHDFSH 181 (366)
Q Consensus 103 ~s~~GLl~~~~-~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~~~~~ 181 (366)
...+|-|...+ ...+++.++|.|++...+.... ...++.+++..+ ++ +.. . ..
T Consensus 21 ~~~~~~l~~~d~~~~~i~~~d~~~~~~~~~~~~~-----------~~~~i~~~~dG~---l~-v~~------~-----~~ 74 (297)
T 3g4e_A 21 EEVSNSLLFVDIPAKKVCRWDSFTKQVQRVTMDA-----------PVSSVALRQSGG---YV-ATI------G-----TK 74 (297)
T ss_dssp ETTTTEEEEEETTTTEEEEEETTTCCEEEEECSS-----------CEEEEEEBTTSS---EE-EEE------T-----TE
T ss_pred ECCCCEEEEEECCCCEEEEEECCCCcEEEEeCCC-----------ceEEEEECCCCC---EE-EEE------C-----Ce
Confidence 44345555554 3456999999998876553221 124677776544 22 222 1 16
Q ss_pred EEEEEcCCCceeecCCCccccceeecccceEEE--CceEEEEEecC--------CCceEEEEEeCCCceeeEeCCCCCCC
Q 039662 182 VAVYKFSTNSWRDLEGFEMRYDYMVDRIFNVYL--NGFCYWVVCRP--------DYSKAILSFSMSDEVFEEMEGPSVPQ 251 (366)
Q Consensus 182 ~~vyss~~~~W~~~~~~~~~~~~~~~~~~~v~~--~G~lywl~~~~--------~~~~~Il~fD~~~~~~~~i~~P~~~~ 251 (366)
+.+|+..++..+.+...+..... ...+.+.+ +|.+|.-.... .....|..+|.... ...+. ....
T Consensus 75 l~~~d~~~g~~~~~~~~~~~~~~--~~~~di~~d~dG~l~~~~~~~~~~~~~~~~~~~~l~~~d~~g~-~~~~~--~~~~ 149 (297)
T 3g4e_A 75 FCALNWKEQSAVVLATVDNDKKN--NRFNDGKVDPAGRYFAGTMAEETAPAVLERHQGALYSLFPDHH-VKKYF--DQVD 149 (297)
T ss_dssp EEEEETTTTEEEEEEECCTTCSS--EEEEEEEECTTSCEEEEEEECCSBTTBCCTTCEEEEEECTTSC-EEEEE--EEES
T ss_pred EEEEECCCCcEEEEEecCCCCCC--CCCCCEEECCCCCEEEecCCcccccccccCCCcEEEEEECCCC-EEEEe--eccc
Confidence 77889888888766321111010 11122333 68866644221 12457888887643 22221 0000
Q ss_pred CCCccccccccceeeEecCe-EEEEEeCCCCCEEEEEEee--CCeeeEEE---EecCCCcceeeEEEeeCCeEEEEEc-C
Q 039662 252 STTYYQSVKTPWMLGTYDDC-LSLLYSDSFAHTFELWTMT--GGNWTKHS---TFGPFIETYQPIGFWRKGEFFLESS-D 324 (366)
Q Consensus 252 ~~~~~~~l~~~~~~~~~~G~-L~~~~~~~~~~~~~IW~l~--~~~W~~~~---~i~~~~~~~~~~~~~~~g~i~~~~~-~ 324 (366)
. ...+ ...-+|+ |+++.. ....+.+|-++ +....... .+........-+.+..+|.+++... .
T Consensus 150 ~---pngi-----~~spdg~~lyv~~~--~~~~i~~~~~d~~~G~~~~~~~~~~~~~~~~~p~g~~~d~~G~lwva~~~~ 219 (297)
T 3g4e_A 150 I---SNGL-----DWSLDHKIFYYIDS--LSYSVDAFDYDLQTGQISNRRSVYKLEKEEQIPDGMCIDAEGKLWVACYNG 219 (297)
T ss_dssp B---EEEE-----EECTTSCEEEEEEG--GGTEEEEEEECTTTCCEEEEEEEEECCGGGCEEEEEEEBTTSCEEEEEETT
T ss_pred c---ccce-----EEcCCCCEEEEecC--CCCcEEEEeccCCCCcccCcEEEEECCCCCCCCCeeEECCCCCEEEEEcCC
Confidence 0 0111 0222555 555543 34566666554 23332211 1211112223345556788887764 5
Q ss_pred CeEEEEECCCCe-EEEEEEe
Q 039662 325 KRVVLYDSTYQE-MRDIRIT 343 (366)
Q Consensus 325 ~~~~~yd~~~~~-~~~i~~~ 343 (366)
+++..||+++++ +..+.+.
T Consensus 220 ~~v~~~d~~tG~~~~~i~~p 239 (297)
T 3g4e_A 220 GRVIRLDPVTGKRLQTVKLP 239 (297)
T ss_dssp TEEEEECTTTCCEEEEEECS
T ss_pred CEEEEEcCCCceEEEEEECC
Confidence 679999999655 4556554
No 35
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=88.58 E-value=12 Score=32.66 Aligned_cols=72 Identities=15% Similarity=0.142 Sum_probs=46.6
Q ss_pred ecCe-EEEEEeCCCCCEEEEEEee-CCeeeEEEEecCCCcceeeEEEeeCCeEE-EEEc-CCeEEEE--ECCCCeEEEEE
Q 039662 268 YDDC-LSLLYSDSFAHTFELWTMT-GGNWTKHSTFGPFIETYQPIGFWRKGEFF-LESS-DKRVVLY--DSTYQEMRDIR 341 (366)
Q Consensus 268 ~~G~-L~~~~~~~~~~~~~IW~l~-~~~W~~~~~i~~~~~~~~~~~~~~~g~i~-~~~~-~~~~~~y--d~~~~~~~~i~ 341 (366)
-+|+ |++... ....+.+|-++ ++.+..+..+........-+.+..+|+.+ +... ++.+..| |.++++++.+.
T Consensus 249 pdG~~l~v~~~--~~~~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~~~d~~tg~l~~~~ 326 (347)
T 3hfq_A 249 HDGHFLYVSNR--GYNTLAVFAVTADGHLTLIQQISTEGDFPRDFDLDPTEAFVVVVNQNTDNATLYARDLTSGKLSLLQ 326 (347)
T ss_dssp TTSCEEEEEEE--TTTEEEEEEECGGGCEEEEEEEECSSSCCCEEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEE
T ss_pred CCCCEEEEEeC--CCCEEEEEEECCCCcEEEeEEEecCCCCcCeEEECCCCCEEEEEEcCCCcEEEEEEeCCCCeEEecc
Confidence 3676 555554 46789999997 44566666665422223456677788744 4443 4677777 88899998876
No 36
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=88.12 E-value=11 Score=31.80 Aligned_cols=190 Identities=11% Similarity=0.118 Sum_probs=97.1
Q ss_pred eecceEEEeec--CCeEEEEeCCCcceeecCCCCCCCCCcccccceeeEEeecCCCCCeEEEEEEeeecccCCCCCCcce
Q 039662 104 PYDGIFCLLKS--HTLINLWNVSLNEYRVIPECRPRLPLYTKTHYANVALGLDPVTKDFKLVLILTLWNDHRDSFHDFSH 181 (366)
Q Consensus 104 s~~GLl~~~~~--~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~~~~~ 181 (366)
..+|.+.+... ...+.++|+..+....+..... ....++.+|+..+ ++.... ..-.
T Consensus 86 ~~~g~l~v~~~~~~~~i~~~d~~g~~~~~~~~~~~---------~~~~~i~~~~~g~---l~v~~~----------~~~~ 143 (286)
T 1q7f_A 86 RNSGDIIVTERSPTHQIQIYNQYGQFVRKFGATIL---------QHPRGVTVDNKGR---IIVVEC----------KVMR 143 (286)
T ss_dssp TTTTEEEEEECGGGCEEEEECTTSCEEEEECTTTC---------SCEEEEEECTTSC---EEEEET----------TTTE
T ss_pred cCCCeEEEEcCCCCCEEEEECCCCcEEEEecCccC---------CCceEEEEeCCCC---EEEEEC----------CCCE
Confidence 45777776663 4569999965555444543221 1225677777532 332221 1125
Q ss_pred EEEEEcCCCceeecCCCccccceeecccceEEE--CceEEEEEecCCCceEEEEEeCCCceeeEeCCCCCCCCCCccccc
Q 039662 182 VAVYKFSTNSWRDLEGFEMRYDYMVDRIFNVYL--NGFCYWVVCRPDYSKAILSFSMSDEVFEEMEGPSVPQSTTYYQSV 259 (366)
Q Consensus 182 ~~vyss~~~~W~~~~~~~~~~~~~~~~~~~v~~--~G~lywl~~~~~~~~~Il~fD~~~~~~~~i~~P~~~~~~~~~~~l 259 (366)
+.+|+.....-+.... .... ....++.+ +|.+|... .....|..||.+.+....+..+.... ....+
T Consensus 144 i~~~~~~g~~~~~~~~-~~~~----~~p~~i~~~~~g~l~v~~---~~~~~i~~~~~~g~~~~~~~~~g~~~---~p~~i 212 (286)
T 1q7f_A 144 VIIFDQNGNVLHKFGC-SKHL----EFPNGVVVNDKQEIFISD---NRAHCVKVFNYEGQYLRQIGGEGITN---YPIGV 212 (286)
T ss_dssp EEEECTTSCEEEEEEC-TTTC----SSEEEEEECSSSEEEEEE---GGGTEEEEEETTCCEEEEESCTTTSC---SEEEE
T ss_pred EEEEcCCCCEEEEeCC-CCcc----CCcEEEEECCCCCEEEEE---CCCCEEEEEcCCCCEEEEEccCCccC---CCcEE
Confidence 6777755443333310 0000 11233333 57876653 12447999998776666554332111 11122
Q ss_pred cccceeeEecCeEEEEEeCCCCC-EEEEEEeeCCeeeEEEEecCCCcceeeEEEeeCCeEEEEEcCCeEEEEECCC
Q 039662 260 KTPWMLGTYDDCLSLLYSDSFAH-TFELWTMTGGNWTKHSTFGPFIETYQPIGFWRKGEFFLESSDKRVVLYDSTY 334 (366)
Q Consensus 260 ~~~~~~~~~~G~L~~~~~~~~~~-~~~IW~l~~~~W~~~~~i~~~~~~~~~~~~~~~g~i~~~~~~~~~~~yd~~~ 334 (366)
...-+|.|.++.. ... .+.+|-.++. -..............-+.+..+|.+++...++.+..|+...
T Consensus 213 -----~~d~~G~l~v~~~--~~~~~i~~~~~~g~-~~~~~~~~~~~~~~~~i~~~~~g~l~vs~~~~~v~v~~~~~ 280 (286)
T 1q7f_A 213 -----GINSNGEILIADN--HNNFNLTIFTQDGQ-LISALESKVKHAQCFDVALMDDGSVVLASKDYRLYIYRYVQ 280 (286)
T ss_dssp -----EECTTCCEEEEEC--SSSCEEEEECTTSC-EEEEEEESSCCSCEEEEEEETTTEEEEEETTTEEEEEECSC
T ss_pred -----EECCCCCEEEEeC--CCCEEEEEECCCCC-EEEEEcccCCCCcceeEEECCCCcEEEECCCCeEEEEEccc
Confidence 1223678877764 333 7777754332 12222222111122345666788888886678898998755
No 37
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=87.60 E-value=11 Score=33.11 Aligned_cols=118 Identities=12% Similarity=0.166 Sum_probs=64.6
Q ss_pred CceEEEEEecCCCceEEEEEeCCCceeeEeC-CCCCCCCCCccccccccceeeEecCeEEEEEeCCC-CCEEEEEEee--
Q 039662 215 NGFCYWVVCRPDYSKAILSFSMSDEVFEEME-GPSVPQSTTYYQSVKTPWMLGTYDDCLSLLYSDSF-AHTFELWTMT-- 290 (366)
Q Consensus 215 ~G~lywl~~~~~~~~~Il~fD~~~~~~~~i~-~P~~~~~~~~~~~l~~~~~~~~~~G~L~~~~~~~~-~~~~~IW~l~-- 290 (366)
+|...+.+ ......|..||+.++++..+. ++...........+ ...-+|+..++... . ...+.||.++
T Consensus 221 dg~~l~v~--~~~~~~v~v~~~~~g~~~~~~~~~~~~~~~~~~~~i-----~~spdg~~l~v~~~-~~~~~i~v~~~~~~ 292 (361)
T 3scy_A 221 DGKFAYLI--NEIGGTVIAFRYADGMLDEIQTVAADTVNAQGSGDI-----HLSPDGKYLYASNR-LKADGVAIFKVDET 292 (361)
T ss_dssp TSSEEEEE--ETTTCEEEEEEEETTEEEEEEEEESCSSCCCCEEEE-----EECTTSSEEEEEEC-SSSCEEEEEEECTT
T ss_pred CCCEEEEE--cCCCCeEEEEEecCCceEEeEEEecCCCCCCCcccE-----EECCCCCEEEEECC-CCCCEEEEEEEcCC
Confidence 57643444 222346888888877765442 22111111111122 12336774434332 3 5789999997
Q ss_pred CCeeeEEEEecCCCcceeeEEEeeCCeEEEEEc--CCeEEE--EECCCCeEEEEE
Q 039662 291 GGNWTKHSTFGPFIETYQPIGFWRKGEFFLESS--DKRVVL--YDSTYQEMRDIR 341 (366)
Q Consensus 291 ~~~W~~~~~i~~~~~~~~~~~~~~~g~i~~~~~--~~~~~~--yd~~~~~~~~i~ 341 (366)
+..+..+..+.. .....-+.+..+|+.++... ++.+.. +|+++++++.+.
T Consensus 293 ~g~~~~~~~~~~-g~~~~~~~~spdg~~l~~~~~~~~~v~v~~~d~~~g~~~~~~ 346 (361)
T 3scy_A 293 NGTLTKVGYQLT-GIHPRNFIITPNGKYLLVACRDTNVIQIFERDQATGLLTDIK 346 (361)
T ss_dssp TCCEEEEEEEEC-SSCCCEEEECTTSCEEEEEETTTTEEEEEEECTTTCCEEECS
T ss_pred CCcEEEeeEecC-CCCCceEEECCCCCEEEEEECCCCCEEEEEEECCCCcEeecc
Confidence 366666666654 22334466777887544433 456555 688888887653
No 38
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=85.95 E-value=17 Score=31.72 Aligned_cols=192 Identities=10% Similarity=0.018 Sum_probs=98.9
Q ss_pred ecceEEEeec-CCeEEEEeCCCccee-ecCCCCCCCCCcccccceeeEEeecCCCCCeEEEEEEeeecccCCCCCCcceE
Q 039662 105 YDGIFCLLKS-HTLINLWNVSLNEYR-VIPECRPRLPLYTKTHYANVALGLDPVTKDFKLVLILTLWNDHRDSFHDFSHV 182 (366)
Q Consensus 105 ~~GLl~~~~~-~~~~~V~NP~T~~~~-~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~ 182 (366)
.++.+.+... .+.+.|+|+.|++.. .+|.... ..++.+++. . ++..... . + -.+
T Consensus 52 ~~~~lyv~~~~~~~v~viD~~t~~~~~~i~~~~~-----------p~~i~~~~~--g-~lyv~~~----~-~-----~~v 107 (328)
T 3dsm_A 52 RDGIGWIVVNNSHVIFAIDINTFKEVGRITGFTS-----------PRYIHFLSD--E-KAYVTQI----W-D-----YRI 107 (328)
T ss_dssp ETTEEEEEEGGGTEEEEEETTTCCEEEEEECCSS-----------EEEEEEEET--T-EEEEEEB----S-C-----SEE
T ss_pred ECCEEEEEEcCCCEEEEEECcccEEEEEcCCCCC-----------CcEEEEeCC--C-eEEEEEC----C-C-----CeE
Confidence 4555544443 456999999999884 4653211 134555443 3 4544432 0 1 267
Q ss_pred EEEEcCCCcee-ecCCCcccc--ceeecccceEEECceEEEEEecCCCceEEEEEeCCCcee-eEeCCCCCCCCCCcccc
Q 039662 183 AVYKFSTNSWR-DLEGFEMRY--DYMVDRIFNVYLNGFCYWVVCRPDYSKAILSFSMSDEVF-EEMEGPSVPQSTTYYQS 258 (366)
Q Consensus 183 ~vyss~~~~W~-~~~~~~~~~--~~~~~~~~~v~~~G~lywl~~~~~~~~~Il~fD~~~~~~-~~i~~P~~~~~~~~~~~ 258 (366)
.+++..+++-. .+ +... .........+..+|.+|... ......|..+|+++.+. ..++..... ..
T Consensus 108 ~~iD~~t~~~~~~i---~~g~~~~~~~~p~~i~~~~~~lyv~~--~~~~~~v~viD~~t~~~~~~i~~g~~p------~~ 176 (328)
T 3dsm_A 108 FIINPKTYEITGYI---ECPDMDMESGSTEQMVQYGKYVYVNC--WSYQNRILKIDTETDKVVDELTIGIQP------TS 176 (328)
T ss_dssp EEEETTTTEEEEEE---ECTTCCTTTCBCCCEEEETTEEEEEE--CTTCCEEEEEETTTTEEEEEEECSSCB------CC
T ss_pred EEEECCCCeEEEEE---EcCCccccCCCcceEEEECCEEEEEc--CCCCCEEEEEECCCCeEEEEEEcCCCc------cc
Confidence 88888877532 22 1111 00000112223577787764 21134799999998776 345443221 12
Q ss_pred ccccceeeEecCeEEEEEeCCCC------CEEEEEEee--CCeeeEEEEecCCCcceeeEEEeeCCeEEEEEcCCeEEEE
Q 039662 259 VKTPWMLGTYDDCLSLLYSDSFA------HTFELWTMT--GGNWTKHSTFGPFIETYQPIGFWRKGEFFLESSDKRVVLY 330 (366)
Q Consensus 259 l~~~~~~~~~~G~L~~~~~~~~~------~~~~IW~l~--~~~W~~~~~i~~~~~~~~~~~~~~~g~i~~~~~~~~~~~y 330 (366)
+ ...-+|+++++...... ..-.|++++ ..+-.+...++.- ....-+++..+++.++.... .++.+
T Consensus 177 i-----~~~~dG~l~v~~~~~~~~~~~~~~~~~v~~id~~t~~v~~~~~~~~g-~~p~~la~~~d~~~lyv~~~-~v~~~ 249 (328)
T 3dsm_A 177 L-----VMDKYNKMWTITDGGYEGSPYGYEAPSLYRIDAETFTVEKQFKFKLG-DWPSEVQLNGTRDTLYWINN-DIWRM 249 (328)
T ss_dssp C-----EECTTSEEEEEBCCBCTTCSSCBCCCEEEEEETTTTEEEEEEECCTT-CCCEEEEECTTSCEEEEESS-SEEEE
T ss_pred e-----EEcCCCCEEEEECCCccCCccccCCceEEEEECCCCeEEEEEecCCC-CCceeEEEecCCCEEEEEcc-EEEEE
Confidence 2 02336888777542100 013455555 2443333333211 12344556666665555444 89999
Q ss_pred ECCCCeEE
Q 039662 331 DSTYQEMR 338 (366)
Q Consensus 331 d~~~~~~~ 338 (366)
|++++++.
T Consensus 250 d~~t~~~~ 257 (328)
T 3dsm_A 250 PVEADRVP 257 (328)
T ss_dssp ETTCSSCC
T ss_pred ECCCCcee
Confidence 99887753
No 39
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=85.73 E-value=18 Score=31.87 Aligned_cols=197 Identities=11% Similarity=0.057 Sum_probs=93.8
Q ss_pred eecceEEEeecCCeEEEEeCCCcceeecCCCCCCCCCcccccceeeEEeecCCCCCeEEEEEEeeecccCCCCCCcceEE
Q 039662 104 PYDGIFCLLKSHTLINLWNVSLNEYRVIPECRPRLPLYTKTHYANVALGLDPVTKDFKLVLILTLWNDHRDSFHDFSHVA 183 (366)
Q Consensus 104 s~~GLl~~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~~ 183 (366)
+-++.++....++.+.|||..|++........... .......+.+.|..+ .++.... +. .+.
T Consensus 91 s~d~~l~~~s~dg~v~lWd~~~~~~~~~~~~~~~~-----H~~~V~~v~~spdg~--~l~sgs~------d~-----~i~ 152 (344)
T 4gqb_B 91 VGERGILVASDSGAVELWELDENETLIVSKFCKYE-----HDDIVSTVSVLSSGT--QAVSGSK------DI-----CIK 152 (344)
T ss_dssp ETTTEEEEEETTSEEEEEEECTTSSCEEEEEEEEC-----CSSCEEEEEECTTSS--EEEEEET------TS-----CEE
T ss_pred eCCCeEEEEECCCEEEEEeccCCCceeEeeccccC-----CCCCEEEEEECCCCC--EEEEEeC------CC-----eEE
Confidence 44566766666777999999998765433221100 111235667766432 2222221 21 678
Q ss_pred EEEcCCCceeecCCCccccceeecccceEEE--CceEEEEEecCCCceEEEEEeCCCceee-EeCCCCCCCCCCcccccc
Q 039662 184 VYKFSTNSWRDLEGFEMRYDYMVDRIFNVYL--NGFCYWVVCRPDYSKAILSFSMSDEVFE-EMEGPSVPQSTTYYQSVK 260 (366)
Q Consensus 184 vyss~~~~W~~~~~~~~~~~~~~~~~~~v~~--~G~lywl~~~~~~~~~Il~fD~~~~~~~-~i~~P~~~~~~~~~~~l~ 260 (366)
+++.+++.=... +.... ..-.++.+ +|.-+.++...+ ..|..+|+.+.+.. .+..+... .....+
T Consensus 153 iwd~~~~~~~~~--~~~h~----~~V~~~~~~~~~~~~l~s~s~D--~~v~iwd~~~~~~~~~~~~~~~~---~~~~~~- 220 (344)
T 4gqb_B 153 VWDLAQQVVLSS--YRAHA----AQVTCVAASPHKDSVFLSCSED--NRILLWDTRCPKPASQIGCSAPG---YLPTSL- 220 (344)
T ss_dssp EEETTTTEEEEE--ECCCS----SCEEEEEECSSCTTEEEEEETT--SCEEEEETTSSSCEEECC----C---CCEEEE-
T ss_pred EEECCCCcEEEE--EcCcC----CceEEEEecCCCCCceeeeccc--cccccccccccceeeeeecceee---ccceee-
Confidence 888876532111 01000 01112222 332222322222 35888898876543 23222211 001111
Q ss_pred ccceeeE--ecCeEEEEEeCCCCCEEEEEEeeCCeeeEEEEecCCCcceeeEEEeeCCe-EEE-EEcCCeEEEEECCCCe
Q 039662 261 TPWMLGT--YDDCLSLLYSDSFAHTFELWTMTGGNWTKHSTFGPFIETYQPIGFWRKGE-FFL-ESSDKRVVLYDSTYQE 336 (366)
Q Consensus 261 ~~~~~~~--~~G~L~~~~~~~~~~~~~IW~l~~~~W~~~~~i~~~~~~~~~~~~~~~g~-i~~-~~~~~~~~~yd~~~~~ 336 (366)
.. .++.+.+... ....+.||-+... ..+.++........-+.+..+|. ++. ...++.+.+||.++++
T Consensus 221 -----~~~p~~~~~l~sg~--~dg~v~~wd~~~~--~~~~~~~~h~~~v~~v~fsp~g~~~lasgs~D~~i~vwd~~~~~ 291 (344)
T 4gqb_B 221 -----AWHPQQSEVFVFGD--ENGTVSLVDTKST--SCVLSSAVHSQCVTGLVFSPHSVPFLASLSEDCSLAVLDSSLSE 291 (344)
T ss_dssp -----EECSSCTTEEEEEE--TTSEEEEEESCC----CCEEEECCSSCEEEEEECSSSSCCEEEEETTSCEEEECTTCCE
T ss_pred -----eecCCCCcceEEec--cCCcEEEEECCCC--cEEEEEcCCCCCEEEEEEccCCCeEEEEEeCCCeEEEEECCCCc
Confidence 21 1445555444 4578999976621 11222222122223345556653 444 3457889999999987
Q ss_pred EEE
Q 039662 337 MRD 339 (366)
Q Consensus 337 ~~~ 339 (366)
+..
T Consensus 292 ~~~ 294 (344)
T 4gqb_B 292 LFR 294 (344)
T ss_dssp EEE
T ss_pred EEE
Confidence 654
No 40
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=83.22 E-value=16 Score=33.30 Aligned_cols=110 Identities=13% Similarity=0.101 Sum_probs=61.6
Q ss_pred ECceEEEEEecCCCceEEEEEeCCCceeeEeCCCCCCCCCCccccccccceeeEecCe-EEEEEeCCCCCEEEEEEee-C
Q 039662 214 LNGFCYWVVCRPDYSKAILSFSMSDEVFEEMEGPSVPQSTTYYQSVKTPWMLGTYDDC-LSLLYSDSFAHTFELWTMT-G 291 (366)
Q Consensus 214 ~~G~lywl~~~~~~~~~Il~fD~~~~~~~~i~~P~~~~~~~~~~~l~~~~~~~~~~G~-L~~~~~~~~~~~~~IW~l~-~ 291 (366)
-+|.+||.. .....|..+|+++.+...+...... . . + ...-+|. |++.... ... .||.++ +
T Consensus 140 ~~g~lyv~d---~~~~~I~~id~~~g~~~~~~~~~~~---~-~--i-----a~~~~g~~l~~~d~~-~~~--~I~~~d~~ 202 (409)
T 3hrp_A 140 GNNTVLAYQ---RDDPRVRLISVDDNKVTTVHPGFKG---G-K--P-----AVTKDKQRVYSIGWE-GTH--TVYVYMKA 202 (409)
T ss_dssp STTEEEEEE---TTTTEEEEEETTTTEEEEEEETCCB---C-B--C-----EECTTSSEEEEEBSS-TTC--EEEEEEGG
T ss_pred CCCCEEEEe---cCCCcEEEEECCCCEEEEeeccCCC---C-c--e-----eEecCCCcEEEEecC-CCc--eEEEEEcC
Confidence 378999985 2345799999998877665322111 0 1 2 1233454 4443331 212 677777 3
Q ss_pred Ceee--EEEEecC-CCcceeeEEEee-CCeEEEEEcCCeEEEEECCCCeEEEE
Q 039662 292 GNWT--KHSTFGP-FIETYQPIGFWR-KGEFFLESSDKRVVLYDSTYQEMRDI 340 (366)
Q Consensus 292 ~~W~--~~~~i~~-~~~~~~~~~~~~-~g~i~~~~~~~~~~~yd~~~~~~~~i 340 (366)
..|. ..-.+.. ......-+.+.. +|.+++...++.++.||++++....+
T Consensus 203 ~~~~~~~~g~~~~~~~~~p~~iav~p~~g~lyv~d~~~~I~~~d~~~~~~~~~ 255 (409)
T 3hrp_A 203 SGWAPTRIGQLGSTFSGKIGAVALDETEEWLYFVDSNKNFGRFNVKTQEVTLI 255 (409)
T ss_dssp GTTCEEEEEECCTTSCSCCCBCEECTTSSEEEEECTTCEEEEEETTTCCEEEE
T ss_pred CCceeEEeeeccchhcCCcEEEEEeCCCCeEEEEECCCcEEEEECCCCCEEEE
Confidence 3333 2212222 112233455666 67888865567899999998876554
No 41
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=83.06 E-value=24 Score=31.14 Aligned_cols=110 Identities=14% Similarity=0.068 Sum_probs=60.5
Q ss_pred cceEEECceEEEEEecCCCceEEEEEeCCCceee-EeCCCCCCCCCCccccccccceeeEecCeEEEEEeCCCCCEEEEE
Q 039662 209 IFNVYLNGFCYWVVCRPDYSKAILSFSMSDEVFE-EMEGPSVPQSTTYYQSVKTPWMLGTYDDCLSLLYSDSFAHTFELW 287 (366)
Q Consensus 209 ~~~v~~~G~lywl~~~~~~~~~Il~fD~~~~~~~-~i~~P~~~~~~~~~~~l~~~~~~~~~~G~L~~~~~~~~~~~~~IW 287 (366)
...+..+|.+|... . ...|.+||.++++.. ..+++.... ... ...+|.+.+... .. .|+
T Consensus 97 ~~~~~~~~~v~v~~--~--~g~l~a~d~~tG~~~W~~~~~~~~~-----~~p------~~~~~~v~v~~~---~g--~l~ 156 (376)
T 3q7m_A 97 GGVTVSGGHVYIGS--E--KAQVYALNTSDGTVAWQTKVAGEAL-----SRP------VVSDGLVLIHTS---NG--QLQ 156 (376)
T ss_dssp EEEEEETTEEEEEE--T--TSEEEEEETTTCCEEEEEECSSCCC-----SCC------EEETTEEEEECT---TS--EEE
T ss_pred cCceEeCCEEEEEc--C--CCEEEEEECCCCCEEEEEeCCCceE-----cCC------EEECCEEEEEcC---CC--eEE
Confidence 34566788888765 2 247999999876542 234443221 122 445666655432 12 344
Q ss_pred Eee---C-CeeeEEEEecCC--CcceeeEEEeeCCeEEEEEcCCeEEEEECCCCeEEEE
Q 039662 288 TMT---G-GNWTKHSTFGPF--IETYQPIGFWRKGEFFLESSDKRVVLYDSTYQEMRDI 340 (366)
Q Consensus 288 ~l~---~-~~W~~~~~i~~~--~~~~~~~~~~~~g~i~~~~~~~~~~~yd~~~~~~~~i 340 (366)
.++ | ..|.....-... .....|+. .++.+++...++.++.+|+++++..+-
T Consensus 157 ~~d~~tG~~~W~~~~~~~~~~~~~~~~~~~--~~~~v~~g~~~g~l~~~d~~tG~~~w~ 213 (376)
T 3q7m_A 157 ALNEADGAVKWTVNLDMPSLSLRGESAPTT--AFGAAVVGGDNGRVSAVLMEQGQMIWQ 213 (376)
T ss_dssp EEETTTCCEEEEEECCC-----CCCCCCEE--ETTEEEECCTTTEEEEEETTTCCEEEE
T ss_pred EEECCCCcEEEEEeCCCCceeecCCCCcEE--ECCEEEEEcCCCEEEEEECCCCcEEEE
Confidence 444 3 456654321111 01123332 256677666678999999999877653
No 42
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=82.76 E-value=22 Score=32.30 Aligned_cols=193 Identities=10% Similarity=0.070 Sum_probs=89.2
Q ss_pred ecc-eEEEeecCCeEEEEeCCCcceeecCCCCCCCCCcccccceeeEEeecCCCCCeEEEEEEeeecccCCCCCCcceEE
Q 039662 105 YDG-IFCLLKSHTLINLWNVSLNEYRVIPECRPRLPLYTKTHYANVALGLDPVTKDFKLVLILTLWNDHRDSFHDFSHVA 183 (366)
Q Consensus 105 ~~G-Ll~~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~~ 183 (366)
.++ +|.....++.+.|||..+++...+-.... ......++.|.|..+.+ ++.... ++ .+.
T Consensus 130 ~~~~~lasGs~dg~i~lWd~~~~~~~~~~~~~g-------H~~~V~~l~f~p~~~~~-l~s~s~------D~-----~v~ 190 (435)
T 4e54_B 130 THPSTVAVGSKGGDIMLWNFGIKDKPTFIKGIG-------AGGSITGLKFNPLNTNQ-FYASSM------EG-----TTR 190 (435)
T ss_dssp SCTTCEEEEETTSCEEEECSSCCSCCEEECCCS-------SSCCCCEEEECSSCTTE-EEEECS------SS-----CEE
T ss_pred CCCCEEEEEeCCCEEEEEECCCCCceeEEEccC-------CCCCEEEEEEeCCCCCE-EEEEeC------CC-----EEE
Confidence 344 55555556679999999887544322211 11123567777654433 332221 22 577
Q ss_pred EEEcCCCceeecCCCccccceeecccceEEECceEEEEEecCCCceEEEEEeCCCceeeEeCCCCCCCCCCccccccccc
Q 039662 184 VYKFSTNSWRDLEGFEMRYDYMVDRIFNVYLNGFCYWVVCRPDYSKAILSFSMSDEVFEEMEGPSVPQSTTYYQSVKTPW 263 (366)
Q Consensus 184 vyss~~~~W~~~~~~~~~~~~~~~~~~~v~~~G~lywl~~~~~~~~~Il~fD~~~~~~~~i~~P~~~~~~~~~~~l~~~~ 263 (366)
+++.+++.-+........... ...-.+.-+|.+...+. . ...|..+|++......+.... .....+
T Consensus 191 iwd~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~l~~g~-~--dg~i~~wd~~~~~~~~~~~h~-----~~v~~v---- 256 (435)
T 4e54_B 191 LQDFKGNILRVFASSDTINIW--FCSLDVSASSRMVVTGD-N--VGNVILLNMDGKELWNLRMHK-----KKVTHV---- 256 (435)
T ss_dssp EEETTSCEEEEEECCSSCSCC--CCCEEEETTTTEEEEEC-S--SSBEEEEESSSCBCCCSBCCS-----SCEEEE----
T ss_pred EeeccCCceeEEeccCCCCcc--EEEEEECCCCCEEEEEe-C--CCcEeeeccCcceeEEEeccc-----ceEEee----
Confidence 888877655444211110000 00111122444443331 2 235778888765433222111 001111
Q ss_pred eeeEe-cCe-EEEEEeCCCCCEEEEEEee-C---CeeeEEEEecCCCcceeeEEEeeCCeEEEE-EcCCeEEEEECCCCe
Q 039662 264 MLGTY-DDC-LSLLYSDSFAHTFELWTMT-G---GNWTKHSTFGPFIETYQPIGFWRKGEFFLE-SSDKRVVLYDSTYQE 336 (366)
Q Consensus 264 ~~~~~-~G~-L~~~~~~~~~~~~~IW~l~-~---~~W~~~~~i~~~~~~~~~~~~~~~g~i~~~-~~~~~~~~yd~~~~~ 336 (366)
... +|. +.+... ....+.||-+. . .... ....+... ..-+.+..+|..++. ..++.+..||.+++.
T Consensus 257 --~~~p~~~~~~~s~s--~d~~v~iwd~~~~~~~~~~~--~~~~h~~~-v~~~~~spdg~~l~s~~~D~~i~iwd~~~~~ 329 (435)
T 4e54_B 257 --ALNPCCDWFLATAS--VDQTVKIWDLRQVRGKASFL--YSLPHRHP-VNAACFSPDGARLLTTDQKSEIRVYSASQWD 329 (435)
T ss_dssp --EECTTCSSEEEEEE--TTSBCCEEETTTCCSSSCCS--BCCBCSSC-EEECCBCTTSSEEEEEESSSCEEEEESSSSS
T ss_pred --eecCCCceEEEEec--CcceeeEEecccccccceEE--Eeeecccc-ccceeECCCCCeeEEEcCCCEEEEEECCCCc
Confidence 111 343 333333 45678899766 2 1110 00011111 122334456665554 447889999988764
Q ss_pred E
Q 039662 337 M 337 (366)
Q Consensus 337 ~ 337 (366)
.
T Consensus 330 ~ 330 (435)
T 4e54_B 330 C 330 (435)
T ss_dssp S
T ss_pred c
Confidence 3
No 43
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=81.57 E-value=27 Score=30.70 Aligned_cols=193 Identities=9% Similarity=0.009 Sum_probs=97.2
Q ss_pred eEEEeecCCeEEEEeCCCcceeecCCCCCCCCCcccccceeeEEeecCCCCCeEEEEEEeeecccCCCCCCcceEEEEEc
Q 039662 108 IFCLLKSHTLINLWNVSLNEYRVIPECRPRLPLYTKTHYANVALGLDPVTKDFKLVLILTLWNDHRDSFHDFSHVAVYKF 187 (366)
Q Consensus 108 Ll~~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~~vyss 187 (366)
+|+....++.+.|||..+++....-.... ......++.+.|..+ +.+.... .+ -.+.+|+.
T Consensus 88 ~l~s~~~dg~i~iwd~~~~~~~~~~~~~~-------h~~~v~~~~~~~~~~--~~l~s~~-----~d-----~~i~iwd~ 148 (383)
T 3ei3_B 88 TVAVGSKGGDIILWDYDVQNKTSFIQGMG-------PGDAITGMKFNQFNT--NQLFVSS-----IR-----GATTLRDF 148 (383)
T ss_dssp EEEEEEBTSCEEEEETTSTTCEEEECCCS-------TTCBEEEEEEETTEE--EEEEEEE-----TT-----TEEEEEET
T ss_pred EEEEEcCCCeEEEEeCCCcccceeeecCC-------cCCceeEEEeCCCCC--CEEEEEe-----CC-----CEEEEEEC
Confidence 45555555569999999887765433211 112335666666322 2232222 02 26788888
Q ss_pred CCCceeecCCCccccceeecccceEEECceEEEEEecCCCceEEEEEeCCCceeeEeCCCCCCCCCCccccccccceeeE
Q 039662 188 STNSWRDLEGFEMRYDYMVDRIFNVYLNGFCYWVVCRPDYSKAILSFSMSDEVFEEMEGPSVPQSTTYYQSVKTPWMLGT 267 (366)
Q Consensus 188 ~~~~W~~~~~~~~~~~~~~~~~~~v~~~G~lywl~~~~~~~~~Il~fD~~~~~~~~i~~P~~~~~~~~~~~l~~~~~~~~ 267 (366)
.++..+............ ..-...-+|.....+. . ...|..+|++.+....+...... ...+ ...
T Consensus 149 ~~~~~~~~~~~~~~~~~v--~~~~~~~~~~~l~~~~-~--d~~i~i~d~~~~~~~~~~~h~~~-----v~~~-----~~~ 213 (383)
T 3ei3_B 149 SGSVIQVFAKTDSWDYWY--CCVDVSVSRQMLATGD-S--TGRLLLLGLDGHEIFKEKLHKAK-----VTHA-----EFN 213 (383)
T ss_dssp TSCEEEEEECCCCSSCCE--EEEEEETTTTEEEEEE-T--TSEEEEEETTSCEEEEEECSSSC-----EEEE-----EEC
T ss_pred CCCceEEEeccCCCCCCe--EEEEECCCCCEEEEEC-C--CCCEEEEECCCCEEEEeccCCCc-----EEEE-----EEC
Confidence 876655542111000000 0011112444333332 2 34688899876655555432211 1122 022
Q ss_pred ecCe-EEEEEeCCCCCEEEEEEee-C-CeeeEEEEecCCCcceeeEEEee-CCeEEEE-EcCCeEEEEECCCCeE
Q 039662 268 YDDC-LSLLYSDSFAHTFELWTMT-G-GNWTKHSTFGPFIETYQPIGFWR-KGEFFLE-SSDKRVVLYDSTYQEM 337 (366)
Q Consensus 268 ~~G~-L~~~~~~~~~~~~~IW~l~-~-~~W~~~~~i~~~~~~~~~~~~~~-~g~i~~~-~~~~~~~~yd~~~~~~ 337 (366)
-+|. +.+... ....+.||-+. + ..-.....+... ....-+.+.. ++..++. ..++.+..||+++++.
T Consensus 214 ~~~~~~l~s~~--~d~~i~iwd~~~~~~~~~~~~~~~~~-~~v~~~~~s~~~~~~l~~~~~d~~i~iwd~~~~~~ 285 (383)
T 3ei3_B 214 PRCDWLMATSS--VDATVKLWDLRNIKDKNSYIAEMPHE-KPVNAAYFNPTDSTKLLTTDQRNEIRVYSSYDWSK 285 (383)
T ss_dssp SSCTTEEEEEE--TTSEEEEEEGGGCCSTTCEEEEEECS-SCEEEEEECTTTSCEEEEEESSSEEEEEETTBTTS
T ss_pred CCCCCEEEEEe--CCCEEEEEeCCCCCcccceEEEecCC-CceEEEEEcCCCCCEEEEEcCCCcEEEEECCCCcc
Confidence 2455 544444 45789999887 2 222333334433 2233445556 6765554 4578999999987543
No 44
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=80.65 E-value=25 Score=29.63 Aligned_cols=112 Identities=13% Similarity=0.114 Sum_probs=68.8
Q ss_pred EECceEEEEEecCCCceEEEEEeCCCcee-eEeCCCCCCCCCCccccccccceeeEecCeEEEEEeCCCCCEEEEEEeeC
Q 039662 213 YLNGFCYWVVCRPDYSKAILSFSMSDEVF-EEMEGPSVPQSTTYYQSVKTPWMLGTYDDCLSLLYSDSFAHTFELWTMTG 291 (366)
Q Consensus 213 ~~~G~lywl~~~~~~~~~Il~fD~~~~~~-~~i~~P~~~~~~~~~~~l~~~~~~~~~~G~L~~~~~~~~~~~~~IW~l~~ 291 (366)
+.+|.+|--+. ..+...|..+|+++++. ..+++|.... .-.+ ...+++|+++.- ... .+|+.+-
T Consensus 28 ~~~~~LyestG-~~g~S~v~~vD~~tgkv~~~~~l~~~~f----geGi------~~~~~~ly~ltw--~~~--~v~v~D~ 92 (243)
T 3mbr_X 28 YLRGHLYESTG-ETGRSSVRKVDLETGRILQRAEVPPPYF----GAGI------VAWRDRLIQLTW--RNH--EGFVYDL 92 (243)
T ss_dssp EETTEEEEEEC-CTTSCEEEEEETTTCCEEEEEECCTTCC----EEEE------EEETTEEEEEES--SSS--EEEEEET
T ss_pred EECCEEEEECC-CCCCceEEEEECCCCCEEEEEeCCCCcc----eeEE------EEeCCEEEEEEe--eCC--EEEEEEC
Confidence 44567776553 23456899999999877 5577876431 1234 556888888864 223 4555552
Q ss_pred CeeeEEEEecCCCcceeeEEEeeCCe-EEEEEcCCeEEEEECCCCeE-EEEEE
Q 039662 292 GNWTKHSTFGPFIETYQPIGFWRKGE-FFLESSDKRVVLYDSTYQEM-RDIRI 342 (366)
Q Consensus 292 ~~W~~~~~i~~~~~~~~~~~~~~~g~-i~~~~~~~~~~~yd~~~~~~-~~i~~ 342 (366)
..-.++.++.... ...++..++. +++...+.++..+|++|.+. ++|.+
T Consensus 93 ~tl~~~~ti~~~~---~Gwglt~dg~~L~vSdgs~~l~~iDp~t~~~~~~I~V 142 (243)
T 3mbr_X 93 ATLTPRARFRYPG---EGWALTSDDSHLYMSDGTAVIRKLDPDTLQQVGSIKV 142 (243)
T ss_dssp TTTEEEEEEECSS---CCCEEEECSSCEEEECSSSEEEEECTTTCCEEEEEEC
T ss_pred CcCcEEEEEeCCC---CceEEeeCCCEEEEECCCCeEEEEeCCCCeEEEEEEE
Confidence 3334555555431 3355555554 66666688999999999654 45554
No 45
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=79.58 E-value=26 Score=29.28 Aligned_cols=185 Identities=8% Similarity=-0.009 Sum_probs=92.2
Q ss_pred eecceEEEeec-CCeEEEEeCCCcceeecCCCCCCCCCcccccceeeEEeecCCCCCeEEEEEEeeecccCCCCCCcceE
Q 039662 104 PYDGIFCLLKS-HTLINLWNVSLNEYRVIPECRPRLPLYTKTHYANVALGLDPVTKDFKLVLILTLWNDHRDSFHDFSHV 182 (366)
Q Consensus 104 s~~GLl~~~~~-~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~ 182 (366)
..+|-+.+... ...++++||. ++....+.+.. .....++.+|+..+ +.+.. . ..-.+
T Consensus 112 ~~~g~l~v~~~~~~~i~~~~~~-g~~~~~~~~~~--------~~~~~~i~~d~~g~----l~v~~----~-----~~~~i 169 (300)
T 2qc5_A 112 GLNGDIWFTQLNGDRIGKLTAD-GTIYEYDLPNK--------GSYPAFITLGSDNA----LWFTE----N-----QNNSI 169 (300)
T ss_dssp CSTTCEEEEETTTTEEEEECTT-SCEEEEECSST--------TCCEEEEEECTTSS----EEEEE----T-----TTTEE
T ss_pred CCCCCEEEEccCCCeEEEECCC-CCEEEccCCCC--------CCCceeEEECCCCC----EEEEe----c-----CCCeE
Confidence 34676666654 4568889987 66654432211 11235677776543 22322 0 11256
Q ss_pred EEEEcCCCceeecCCCccccceeecccceEEE--CceEEEEEecCCCceEEEEEeCCCceeeEeCCCCCCCCCCcccccc
Q 039662 183 AVYKFSTNSWRDLEGFEMRYDYMVDRIFNVYL--NGFCYWVVCRPDYSKAILSFSMSDEVFEEMEGPSVPQSTTYYQSVK 260 (366)
Q Consensus 183 ~vyss~~~~W~~~~~~~~~~~~~~~~~~~v~~--~G~lywl~~~~~~~~~Il~fD~~~~~~~~i~~P~~~~~~~~~~~l~ 260 (366)
.+|+. ++...... .+... ....++.+ +|.+|+.. .....|..||. ++++..+.+|.... ....+
T Consensus 170 ~~~~~-~g~~~~~~-~~~~~----~~~~~i~~d~~g~l~v~~---~~~~~i~~~~~-~g~~~~~~~~~~~~---~~~~i- 235 (300)
T 2qc5_A 170 GRITN-TGKLEEYP-LPTNA----AAPVGITSGNDGALWFVE---IMGNKIGRITT-TGEISEYDIPTPNA---RPHAI- 235 (300)
T ss_dssp EEECT-TCCEEEEE-CSSTT----CCEEEEEECTTSSEEEEE---TTTTEEEEECT-TCCEEEEECSSTTC---CEEEE-
T ss_pred EEECC-CCcEEEee-CCCCC----CCcceEEECCCCCEEEEc---cCCCEEEEEcC-CCcEEEEECCCCCC---CceEE-
Confidence 66766 55555441 11111 11233433 57777654 22346999999 66666665653221 11122
Q ss_pred ccceeeEecCeEEEEEeCCCCCEEEEEEeeCCeeeEEEEecCCCcceeeEEEeeCCeEEEEEcCCeEEEEECC
Q 039662 261 TPWMLGTYDDCLSLLYSDSFAHTFELWTMTGGNWTKHSTFGPFIETYQPIGFWRKGEFFLESSDKRVVLYDST 333 (366)
Q Consensus 261 ~~~~~~~~~G~L~~~~~~~~~~~~~IW~l~~~~W~~~~~i~~~~~~~~~~~~~~~g~i~~~~~~~~~~~yd~~ 333 (366)
...-+|.|.+... ....+.++-.++ ... .+.+........-+.+..+|.+++.... ++..||++
T Consensus 236 ----~~d~~g~l~v~~~--~~~~i~~~~~~g-~~~-~~~~~~~~~~~~~i~~~~~g~l~v~~~~-~i~~~~p~ 299 (300)
T 2qc5_A 236 ----TAGKNSEIWFTEW--GANQIGRITNDN-TIQ-EYQLQTENAEPHGITFGKDGSVWFALKC-KIGKLNLN 299 (300)
T ss_dssp ----EECSTTCEEEEET--TTTEEEEECTTS-CEE-EEECCSTTCCCCCEEECTTSCEEEECSS-EEEEEEEC
T ss_pred ----EECCCCCEEEecc--CCCeEEEECCCC-cEE-EEECCccCCccceeEeCCCCCEEEEccC-ceEEeCCC
Confidence 1223577776653 234444443322 222 2223211111233445567888887665 89999875
No 46
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=79.42 E-value=35 Score=30.65 Aligned_cols=197 Identities=10% Similarity=0.105 Sum_probs=94.8
Q ss_pred eecceEEEeecCCeEEEEeCCCcceeecCCCCCCCCCcccccceeeEEeecCCCCCeEEEEEEeeecccCCCCCCcceEE
Q 039662 104 PYDGIFCLLKSHTLINLWNVSLNEYRVIPECRPRLPLYTKTHYANVALGLDPVTKDFKLVLILTLWNDHRDSFHDFSHVA 183 (366)
Q Consensus 104 s~~GLl~~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~~ 183 (366)
|.+++|....++ .++|||..|++...+-.... ......++.+.|.. .| ++... .+ -.+.
T Consensus 114 S~~n~lAvgld~-tV~lWd~~tg~~~~~~~~~~-------~~~~V~sv~fspdg-~~--lasgs-----~D-----g~v~ 172 (420)
T 4gga_A 114 SSGNVLAVALDN-SVYLWSASSGDILQLLQMEQ-------PGEYISSVAWIKEG-NY--LAVGT-----SS-----AEVQ 172 (420)
T ss_dssp CTTSEEEEEETT-EEEEEETTTCCEEEEEECCS-------TTCCEEEEEECTTS-SE--EEEEE-----TT-----SCEE
T ss_pred CCCCEEEEEeCC-EEEEEECCCCCEEEEEEecC-------CCCcEEEEEECCCC-CE--EEEEE-----CC-----CeEE
Confidence 456777665544 59999999998876543322 11123567777643 33 33332 02 2678
Q ss_pred EEEcCCCceeecCCCccccceeecccceEEECceEEEEEecCCCceEEEEEeCCCceeeEeCCCCCCCCCCccccccccc
Q 039662 184 VYKFSTNSWRDLEGFEMRYDYMVDRIFNVYLNGFCYWVVCRPDYSKAILSFSMSDEVFEEMEGPSVPQSTTYYQSVKTPW 263 (366)
Q Consensus 184 vyss~~~~W~~~~~~~~~~~~~~~~~~~v~~~G~lywl~~~~~~~~~Il~fD~~~~~~~~i~~P~~~~~~~~~~~l~~~~ 263 (366)
+|+..++.-... .... .....++..+|.+-..+. . ...+..+|..........+..... ....+
T Consensus 173 iWd~~~~~~~~~--~~~h----~~~v~~~s~~~~~l~sgs-~--d~~i~~~d~~~~~~~~~~~~~h~~---~~~~~---- 236 (420)
T 4gga_A 173 LWDVQQQKRLRN--MTSH----SARVGSLSWNSYILSSGS-R--SGHIHHHDVRVAEHHVATLSGHSQ---EVCGL---- 236 (420)
T ss_dssp EEETTTTEEEEE--ECCC----SSCEEEEEEETTEEEEEE-T--TSEEEEEETTSSSCEEEEEECCSS---CEEEE----
T ss_pred EEEcCCCcEEEE--EeCC----CCceEEEeeCCCEEEEEe-C--CCceeEeeecccceeeEEeccccc---ceeee----
Confidence 898887632111 0110 111223444554433331 1 235777776654432222211110 01111
Q ss_pred eeeEecCeEEEEEeCCCCCEEEEEEee-C-CeeeEEEEecCCCcceeeEEEeeC-CeEEEEE---cCCeEEEEECCCCeE
Q 039662 264 MLGTYDDCLSLLYSDSFAHTFELWTMT-G-GNWTKHSTFGPFIETYQPIGFWRK-GEFFLES---SDKRVVLYDSTYQEM 337 (366)
Q Consensus 264 ~~~~~~G~L~~~~~~~~~~~~~IW~l~-~-~~W~~~~~i~~~~~~~~~~~~~~~-g~i~~~~---~~~~~~~yd~~~~~~ 337 (366)
...-+|...+... ....+.||-.. + ..+...............+.+... +.++... .++.+..||+++++.
T Consensus 237 -~~~~~g~~l~s~~--~D~~v~i~~~~~~~~~~~~~~~~~~~~~~V~~~~~~p~~~~~la~~~gs~D~~I~iwd~~t~~~ 313 (420)
T 4gga_A 237 -RWAPDGRHLASGG--NDNLVNVWPSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGAC 313 (420)
T ss_dssp -EECTTSSEEEEEE--TTSCEEEEESSCCSSCSCCSEEECCCSSCEEEEEECTTCTTEEEEEECTTTCEEEEEETTTTEE
T ss_pred -eecCCCCeeeeee--ccccceEEeeccccccceeeeeecccCCceeeeeeCCCcccEEEEEeecCCCEEEEEeCCcccc
Confidence 0222455444443 45788899877 3 223222222221121222333332 3344332 367899999998876
Q ss_pred EEE
Q 039662 338 RDI 340 (366)
Q Consensus 338 ~~i 340 (366)
...
T Consensus 314 ~~~ 316 (420)
T 4gga_A 314 LSA 316 (420)
T ss_dssp EEE
T ss_pred cee
Confidence 553
No 47
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=78.51 E-value=30 Score=29.43 Aligned_cols=112 Identities=13% Similarity=0.094 Sum_probs=65.8
Q ss_pred EECceEEEEEecCCCceEEEEEeCCCcee-eEeCCCCCCCCCCccccccccceeeEecCeEEEEEeCCCCCEEEEEEeeC
Q 039662 213 YLNGFCYWVVCRPDYSKAILSFSMSDEVF-EEMEGPSVPQSTTYYQSVKTPWMLGTYDDCLSLLYSDSFAHTFELWTMTG 291 (366)
Q Consensus 213 ~~~G~lywl~~~~~~~~~Il~fD~~~~~~-~~i~~P~~~~~~~~~~~l~~~~~~~~~~G~L~~~~~~~~~~~~~IW~l~~ 291 (366)
+.+|.+|--+. ..+...|..+|+++++. ..+++|+.. + .-.+ ...+++|+++.- ... .+|+.+-
T Consensus 50 ~~~~~LyestG-~~g~S~v~~vD~~Tgkv~~~~~l~~~~---F-geGi------t~~g~~ly~ltw--~~~--~v~v~D~ 114 (262)
T 3nol_A 50 YRNGYFYESTG-LNGRSSIRKVDIESGKTLQQIELGKRY---F-GEGI------SDWKDKIVGLTW--KNG--LGFVWNI 114 (262)
T ss_dssp EETTEEEEEEE-ETTEEEEEEECTTTCCEEEEEECCTTC---C-EEEE------EEETTEEEEEES--SSS--EEEEEET
T ss_pred EECCEEEEECC-CCCCceEEEEECCCCcEEEEEecCCcc---c-eeEE------EEeCCEEEEEEe--eCC--EEEEEEC
Confidence 34777777653 22456899999999876 556776532 1 1224 556788888754 223 4555552
Q ss_pred CeeeEEEEecCCCcceeeEEEeeCCe-EEEEEcCCeEEEEECCCCe-EEEEEE
Q 039662 292 GNWTKHSTFGPFIETYQPIGFWRKGE-FFLESSDKRVVLYDSTYQE-MRDIRI 342 (366)
Q Consensus 292 ~~W~~~~~i~~~~~~~~~~~~~~~g~-i~~~~~~~~~~~yd~~~~~-~~~i~~ 342 (366)
..-..+.+++... ...++..+++ +++...+..+..+|++|.+ ..+|.+
T Consensus 115 ~t~~~~~ti~~~~---eG~glt~dg~~L~~SdGs~~i~~iDp~T~~v~~~I~V 164 (262)
T 3nol_A 115 RNLRQVRSFNYDG---EGWGLTHNDQYLIMSDGTPVLRFLDPESLTPVRTITV 164 (262)
T ss_dssp TTCCEEEEEECSS---CCCCEEECSSCEEECCSSSEEEEECTTTCSEEEEEEC
T ss_pred ccCcEEEEEECCC---CceEEecCCCEEEEECCCCeEEEEcCCCCeEEEEEEe
Confidence 2234445555421 2234445555 4544447789999999854 445554
No 48
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=78.19 E-value=27 Score=28.76 Aligned_cols=184 Identities=9% Similarity=-0.020 Sum_probs=93.4
Q ss_pred ecceEEEeecCCeEEEEeCCCcceeecCCCCCCCCCcccccceeeEEeecCCCCCeEEEEEEeeecccCCCCCCcceEEE
Q 039662 105 YDGIFCLLKSHTLINLWNVSLNEYRVIPECRPRLPLYTKTHYANVALGLDPVTKDFKLVLILTLWNDHRDSFHDFSHVAV 184 (366)
Q Consensus 105 ~~GLl~~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~~v 184 (366)
.+|-+.+....+.++++||.++....++.... ....++.+|+..+ ++.... ..-.+.+
T Consensus 76 ~~g~l~v~~~~~~i~~~d~~~~~~~~~~~~~~---------~~p~~i~~~~~g~---l~v~~~----------~~~~i~~ 133 (270)
T 1rwi_B 76 GAGTVYVTDFNNRVVTLAAGSNNQTVLPFDGL---------NYPEGLAVDTQGA---VYVADR----------GNNRVVK 133 (270)
T ss_dssp TTCCEEEEETTTEEEEECTTCSCCEECCCCSC---------SSEEEEEECTTCC---EEEEEG----------GGTEEEE
T ss_pred CCCCEEEEcCCCEEEEEeCCCceEeeeecCCc---------CCCcceEECCCCC---EEEEEC----------CCCEEEE
Confidence 35666666555569999998887666543221 1235777787432 332221 1125566
Q ss_pred EEcCCCceeecCCCccccceeecccceEEE--CceEEEEEecCCCceEEEEEeCCCceeeEeCCCCCCCCCCcccccccc
Q 039662 185 YKFSTNSWRDLEGFEMRYDYMVDRIFNVYL--NGFCYWVVCRPDYSKAILSFSMSDEVFEEMEGPSVPQSTTYYQSVKTP 262 (366)
Q Consensus 185 yss~~~~W~~~~~~~~~~~~~~~~~~~v~~--~G~lywl~~~~~~~~~Il~fD~~~~~~~~i~~P~~~~~~~~~~~l~~~ 262 (366)
|+.++....... .... ....++.+ +|.+|+... ....|..||..+........... .....+
T Consensus 134 ~~~~~~~~~~~~--~~~~----~~p~~i~~~~~g~l~v~~~---~~~~i~~~~~~~~~~~~~~~~~~----~~p~~i--- 197 (270)
T 1rwi_B 134 LAAGSKTQTVLP--FTGL----NDPDGVAVDNSGNVYVTDT---DNNRVVKLEAESNNQVVLPFTDI----TAPWGI--- 197 (270)
T ss_dssp ECTTCCSCEECC--CCSC----CSCCCEEECTTCCEEEEEG---GGTEEEEECTTTCCEEECCCSSC----CSEEEE---
T ss_pred EECCCceeEeec--cccC----CCceeEEEeCCCCEEEEEC---CCCEEEEEecCCCceEeecccCC----CCceEE---
Confidence 655554433221 0000 11223333 588776642 23479999998876544322111 111222
Q ss_pred ceeeE-ecCeEEEEEeCCCCCEEEEEEeeC-CeeeEEEEecCCCcce--eeEEEeeCCeEEEEEc-CCeEEEEECCCCe
Q 039662 263 WMLGT-YDDCLSLLYSDSFAHTFELWTMTG-GNWTKHSTFGPFIETY--QPIGFWRKGEFFLESS-DKRVVLYDSTYQE 336 (366)
Q Consensus 263 ~~~~~-~~G~L~~~~~~~~~~~~~IW~l~~-~~W~~~~~i~~~~~~~--~~~~~~~~g~i~~~~~-~~~~~~yd~~~~~ 336 (366)
.. -+|.|.+... ....+.+|-.++ .... +.. .... .-+.+..+|.+++... ++++..|++..++
T Consensus 198 ---~~d~~g~l~v~~~--~~~~v~~~~~~~~~~~~----~~~-~~~~~p~~i~~~~~g~l~v~~~~~~~v~~~~~~~~~ 266 (270)
T 1rwi_B 198 ---AVDEAGTVYVTEH--NTNQVVKLLAGSTTSTV----LPF-TGLNTPLAVAVDSDRTVYVADRGNDRVVKLTSLEHH 266 (270)
T ss_dssp ---EECTTCCEEEEET--TTSCEEEECTTCSCCEE----CCC-CSCSCEEEEEECTTCCEEEEEGGGTEEEEECCCGGG
T ss_pred ---EECCCCCEEEEEC--CCCcEEEEcCCCCccee----ecc-CCCCCceeEEECCCCCEEEEECCCCEEEEEcCCCcc
Confidence 33 3567776654 334555554443 2111 111 1222 3344556677777754 6789999887654
No 49
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=77.91 E-value=36 Score=29.92 Aligned_cols=197 Identities=13% Similarity=0.071 Sum_probs=85.8
Q ss_pred eecceEEEeecCCeEEEEeCCCcceeecCCCCCCCCCcccccceeeEEeecCCCCCeEEEEEEeeecccCCCCCCcceEE
Q 039662 104 PYDGIFCLLKSHTLINLWNVSLNEYRVIPECRPRLPLYTKTHYANVALGLDPVTKDFKLVLILTLWNDHRDSFHDFSHVA 183 (366)
Q Consensus 104 s~~GLl~~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~~ 183 (366)
+.+|.++....++.+.|||..+++........... ......++.+.|..+ .++.... + -.+.
T Consensus 103 s~d~~~l~~s~dg~v~lWd~~~~~~~~~~~~~~~~-----h~~~V~~v~~spdg~--~l~sgs~------d-----g~v~ 164 (357)
T 4g56_B 103 VSEKGILVASDSGAVELWEILEKESLLVNKFAKYE-----HDDIVKTLSVFSDGT--QAVSGGK------D-----FSVK 164 (357)
T ss_dssp ETTTEEEEEETTSCEEEC--------CCCCEEECC-----CSSCEEEEEECSSSS--EEEEEET------T-----SCEE
T ss_pred cCCCCEEEEECCCEEEEeeccccceeEEEeeccCC-----CCCCEEEEEECCCCC--EEEEEeC------C-----CeEE
Confidence 44566666666666999999998765443322110 112335667766432 2222221 2 1578
Q ss_pred EEEcCCCceeecCCCccccceeecccceEEE--CceEEEEEecCCCceEEEEEeCCCceeeE-eCCCCCCCCCCcccccc
Q 039662 184 VYKFSTNSWRDLEGFEMRYDYMVDRIFNVYL--NGFCYWVVCRPDYSKAILSFSMSDEVFEE-MEGPSVPQSTTYYQSVK 260 (366)
Q Consensus 184 vyss~~~~W~~~~~~~~~~~~~~~~~~~v~~--~G~lywl~~~~~~~~~Il~fD~~~~~~~~-i~~P~~~~~~~~~~~l~ 260 (366)
+|+.+++.-... +.... ....++.+ +|.-+.++...+ ..|..+|+.+.+... +...... .....+
T Consensus 165 iwd~~~~~~~~~--~~~h~----~~v~~v~~s~~~~~~~~s~~~d--g~v~~wd~~~~~~~~~~~~~~~~---~~v~~v- 232 (357)
T 4g56_B 165 VWDLSQKAVLKS--YNAHS----SEVNCVAACPGKDTIFLSCGED--GRILLWDTRKPKPATRIDFCASD---TIPTSV- 232 (357)
T ss_dssp EEETTTTEEEEE--ECCCS----SCEEEEEECTTCSSCEEEEETT--SCEEECCTTSSSCBCBCCCTTCC---SCEEEE-
T ss_pred EEECCCCcEEEE--EcCCC----CCEEEEEEccCCCceeeeeccC--CceEEEECCCCceeeeeeecccc---ccccch-
Confidence 888877643221 01100 01122222 232222322222 357788887765322 2221111 001111
Q ss_pred ccceeeEe--cCeEEEEEeCCCCCEEEEEEeeCCeeeEEEEecCCCcceeeEEEeeCC-eEEEE-EcCCeEEEEECCCCe
Q 039662 261 TPWMLGTY--DDCLSLLYSDSFAHTFELWTMTGGNWTKHSTFGPFIETYQPIGFWRKG-EFFLE-SSDKRVVLYDSTYQE 336 (366)
Q Consensus 261 ~~~~~~~~--~G~L~~~~~~~~~~~~~IW~l~~~~W~~~~~i~~~~~~~~~~~~~~~g-~i~~~-~~~~~~~~yd~~~~~ 336 (366)
... ++.+.+... ....+.||-+... .....+........-+.+..++ .++.. ..++.+.+||.++++
T Consensus 233 -----~~sp~~~~~la~g~--~d~~i~~wd~~~~--~~~~~~~~~~~~v~~l~~sp~~~~~lasgs~D~~i~iwd~~~~~ 303 (357)
T 4g56_B 233 -----TWHPEKDDTFACGD--ETGNVSLVNIKNP--DSAQTSAVHSQNITGLAYSYHSSPFLASISEDCTVAVLDADFSE 303 (357)
T ss_dssp -----EECTTSTTEEEEEE--SSSCEEEEESSCG--GGCEEECCCSSCEEEEEECSSSSCCEEEEETTSCEEEECTTSCE
T ss_pred -----hhhhcccceEEEee--cccceeEEECCCC--cEeEEEeccceeEEEEEEcCCCCCEEEEEeCCCEEEEEECCCCc
Confidence 211 345544443 4567889977621 1112222212222334455554 44443 457889999999887
Q ss_pred EEE
Q 039662 337 MRD 339 (366)
Q Consensus 337 ~~~ 339 (366)
+..
T Consensus 304 ~~~ 306 (357)
T 4g56_B 304 VFR 306 (357)
T ss_dssp EEE
T ss_pred EeE
Confidence 654
No 50
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=77.45 E-value=34 Score=29.38 Aligned_cols=113 Identities=14% Similarity=0.130 Sum_probs=59.2
Q ss_pred CceEEEEEecCCCceEEEEEeCCCceeeEeCCCCCCCCCCccccccccceeeE-ecCeEEEEEeCCCCCEEEEEEee--C
Q 039662 215 NGFCYWVVCRPDYSKAILSFSMSDEVFEEMEGPSVPQSTTYYQSVKTPWMLGT-YDDCLSLLYSDSFAHTFELWTMT--G 291 (366)
Q Consensus 215 ~G~lywl~~~~~~~~~Il~fD~~~~~~~~i~~P~~~~~~~~~~~l~~~~~~~~-~~G~L~~~~~~~~~~~~~IW~l~--~ 291 (366)
+|.+||.. . ....|..+|.+++++..+..+.. .....+ .. -+|+|.+.........-.|++++ +
T Consensus 55 ~g~l~~~~--~-~~~~i~~~d~~~~~~~~~~~~~~----~~~~~i------~~~~dg~l~v~~~~~~~~~~~i~~~d~~~ 121 (333)
T 2dg1_A 55 QGQLFLLD--V-FEGNIFKINPETKEIKRPFVSHK----ANPAAI------KIHKDGRLFVCYLGDFKSTGGIFAATENG 121 (333)
T ss_dssp TSCEEEEE--T-TTCEEEEECTTTCCEEEEEECSS----SSEEEE------EECTTSCEEEEECTTSSSCCEEEEECTTS
T ss_pred CCCEEEEE--C-CCCEEEEEeCCCCcEEEEeeCCC----CCcceE------EECCCCcEEEEeCCCCCCCceEEEEeCCC
Confidence 68888875 2 23479999999888766532111 111222 32 36777776542211112445555 2
Q ss_pred CeeeEEEEecCCCcceeeEEEeeCCeEEEEEc-------CCeEEEEECCCCeEEEE
Q 039662 292 GNWTKHSTFGPFIETYQPIGFWRKGEFFLESS-------DKRVVLYDSTYQEMRDI 340 (366)
Q Consensus 292 ~~W~~~~~i~~~~~~~~~~~~~~~g~i~~~~~-------~~~~~~yd~~~~~~~~i 340 (366)
..-.....-........-+.+..+|.+++... ...++.+|+++++++.+
T Consensus 122 ~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~l~~~~~~~~~~~~~ 177 (333)
T 2dg1_A 122 DNLQDIIEDLSTAYCIDDMVFDSKGGFYFTDFRGYSTNPLGGVYYVSPDFRTVTPI 177 (333)
T ss_dssp CSCEEEECSSSSCCCEEEEEECTTSCEEEEECCCBTTBCCEEEEEECTTSCCEEEE
T ss_pred CEEEEEEccCccCCcccceEECCCCCEEEEeccccccCCCceEEEEeCCCCEEEEe
Confidence 22111111011111223345566788887654 25799999988776654
No 51
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=76.23 E-value=64 Score=31.95 Aligned_cols=196 Identities=9% Similarity=0.056 Sum_probs=95.2
Q ss_pred cceEEEeecCCeEEEEeCCCcceeecCCCCCCCCCcccccceeeEEeecCCCCCeEEEEEEeeecccCCCCCCcceEEEE
Q 039662 106 DGIFCLLKSHTLINLWNVSLNEYRVIPECRPRLPLYTKTHYANVALGLDPVTKDFKLVLILTLWNDHRDSFHDFSHVAVY 185 (366)
Q Consensus 106 ~GLl~~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~~vy 185 (366)
+|-|.+.....-++.+||.|+++..++.... ......++..|+... +.+.. . -.+..|
T Consensus 417 ~g~lWigt~~~Gl~~~~~~~~~~~~~~~~~~-------~~~~v~~i~~d~~g~----lwigt------~-----~Gl~~~ 474 (781)
T 3v9f_A 417 EGNLWFGTYLGNISYYNTRLKKFQIIELEKN-------ELLDVRVFYEDKNKK----IWIGT------H-----AGVFVI 474 (781)
T ss_dssp TSCEEEEETTEEEEEECSSSCEEEECCSTTT-------CCCCEEEEEECTTSE----EEEEE------T-----TEEEEE
T ss_pred CCCEEEEeccCCEEEEcCCCCcEEEeccCCC-------CCCeEEEEEECCCCC----EEEEE------C-----CceEEE
Confidence 3444333322237777888777776653311 011223444454321 44443 1 256788
Q ss_pred EcCCCceeecCCCccccceeecccceEEE--CceEEEEEecCCCceEEEEEeCCCceeeEeCCCCCCCCCCccccccccc
Q 039662 186 KFSTNSWRDLEGFEMRYDYMVDRIFNVYL--NGFCYWVVCRPDYSKAILSFSMSDEVFEEMEGPSVPQSTTYYQSVKTPW 263 (366)
Q Consensus 186 ss~~~~W~~~~~~~~~~~~~~~~~~~v~~--~G~lywl~~~~~~~~~Il~fD~~~~~~~~i~~P~~~~~~~~~~~l~~~~ 263 (366)
+..++.|+...... ..........++.. +|.+ |++... ..|..||..++++..+..+...... ....+
T Consensus 475 ~~~~~~~~~~~~~~-~~~~~~~~i~~i~~d~~g~l-Wigt~~---~Gl~~~~~~~~~~~~~~~~~~l~~~-~i~~i---- 544 (781)
T 3v9f_A 475 DLASKKVIHHYDTS-NSQLLENFVRSIAQDSEGRF-WIGTFG---GGVGIYTPDMQLVRKFNQYEGFCSN-TINQI---- 544 (781)
T ss_dssp ESSSSSCCEEECTT-TSSCSCSCEEEEEECTTCCE-EEEESS---SCEEEECTTCCEEEEECTTTTCSCS-CEEEE----
T ss_pred eCCCCeEEecccCc-ccccccceeEEEEEcCCCCE-EEEEcC---CCEEEEeCCCCeEEEccCCCCCCCC-eeEEE----
Confidence 88888887653111 00000011223333 4554 665321 2489999999999877544332111 11222
Q ss_pred eeeE-ecCeEEEEEeCCCCCEEEEEEee--CCeeeEEEEecCC-CcceeeEEEeeCCeEEEEEcCCeEEEEECCCCeEEE
Q 039662 264 MLGT-YDDCLSLLYSDSFAHTFELWTMT--GGNWTKHSTFGPF-IETYQPIGFWRKGEFFLESSDKRVVLYDSTYQEMRD 339 (366)
Q Consensus 264 ~~~~-~~G~L~~~~~~~~~~~~~IW~l~--~~~W~~~~~i~~~-~~~~~~~~~~~~g~i~~~~~~~~~~~yd~~~~~~~~ 339 (366)
.+ .+|.|.+... ..+ |...+ ...+.....-.-+ .....-+....+|.+++.. ...+..||+++++++.
T Consensus 545 --~~d~~g~lWi~T~----~Gl-v~~~d~~~~~~~~~~~~~gl~~~~i~~i~~d~~g~lW~~t-~~Gl~~~~~~~~~~~~ 616 (781)
T 3v9f_A 545 --YRSSKGQMWLATG----EGL-VCFPSARNFDYQVFQRKEGLPNTHIRAISEDKNGNIWAST-NTGISCYITSKKCFYT 616 (781)
T ss_dssp --EECTTSCEEEEET----TEE-EEESCTTTCCCEEECGGGTCSCCCCCEEEECSSSCEEEEC-SSCEEEEETTTTEEEE
T ss_pred --EECCCCCEEEEEC----CCc-eEEECCCCCcEEEccccCCCCCceEEEEEECCCCCEEEEc-CCceEEEECCCCceEE
Confidence 22 3566665543 111 13333 2333221111111 1112223344567788775 5679999999998877
Q ss_pred EE
Q 039662 340 IR 341 (366)
Q Consensus 340 i~ 341 (366)
+.
T Consensus 617 ~~ 618 (781)
T 3v9f_A 617 YD 618 (781)
T ss_dssp EC
T ss_pred ec
Confidence 54
No 52
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=75.56 E-value=39 Score=29.45 Aligned_cols=185 Identities=13% Similarity=0.095 Sum_probs=79.8
Q ss_pred cCCeEEEEeCCCcceeecCCCCCCCCCcccccceeeEEeecCCCCCeEEEEEEeeecccCCCCCCcceEEEEEcCCCc-e
Q 039662 114 SHTLINLWNVSLNEYRVIPECRPRLPLYTKTHYANVALGLDPVTKDFKLVLILTLWNDHRDSFHDFSHVAVYKFSTNS-W 192 (366)
Q Consensus 114 ~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~~vyss~~~~-W 192 (366)
.++.+.|||..++.+..+-.... .......+.+.|..+ + ++.... + -.+.+|+..++. |
T Consensus 31 ~d~~i~iw~~~~~~~~~~~~~~~-------h~~~v~~~~~s~~~~-~-l~s~s~------d-----~~v~vwd~~~~~~~ 90 (377)
T 3dwl_C 31 ATNQVELYEQDGNGWKHARTFSD-------HDKIVTCVDWAPKSN-R-IVTCSQ------D-----RNAYVYEKRPDGTW 90 (377)
T ss_dssp SSSCBCEEEEETTEEEECCCBCC-------CSSCEEEEEECTTTC-C-EEEEET------T-----SSEEEC------CC
T ss_pred CCCEEEEEEccCCceEEEEEEec-------CCceEEEEEEeCCCC-E-EEEEeC------C-----CeEEEEEcCCCCce
Confidence 34458899998875443332221 112335667766532 2 222221 2 167888887766 5
Q ss_pred eecCCCccccceeecccceEEE--CceEEEEEecCCCceEEEEEeCCCce----eeEeCCCCCCCCCCccccccccceee
Q 039662 193 RDLEGFEMRYDYMVDRIFNVYL--NGFCYWVVCRPDYSKAILSFSMSDEV----FEEMEGPSVPQSTTYYQSVKTPWMLG 266 (366)
Q Consensus 193 ~~~~~~~~~~~~~~~~~~~v~~--~G~lywl~~~~~~~~~Il~fD~~~~~----~~~i~~P~~~~~~~~~~~l~~~~~~~ 266 (366)
+.......... .-..+.+ +|.....+. . ...|..+|+.+++ ...+..|... ....+ ..
T Consensus 91 ~~~~~~~~~~~----~v~~~~~~~~~~~l~~~~-~--d~~i~iwd~~~~~~~~~~~~~~~~h~~----~v~~~-----~~ 154 (377)
T 3dwl_C 91 KQTLVLLRLNR----AATFVRWSPNEDKFAVGS-G--ARVISVCYFEQENDWWVSKHLKRPLRS----TILSL-----DW 154 (377)
T ss_dssp CCEEECCCCSS----CEEEEECCTTSSCCEEEE-S--SSCEEECCC-----CCCCEEECSSCCS----CEEEE-----EE
T ss_pred eeeeEecccCC----ceEEEEECCCCCEEEEEe-c--CCeEEEEEECCcccceeeeEeecccCC----CeEEE-----EE
Confidence 54421111100 1111211 344333332 2 2357788888765 2334332111 11122 01
Q ss_pred EecCeEEEEEeCCCCCEEEEEEee-C--------Cee-------eEEEEecCCCcceeeEEEeeCCeEEE-EEcCCeEEE
Q 039662 267 TYDDCLSLLYSDSFAHTFELWTMT-G--------GNW-------TKHSTFGPFIETYQPIGFWRKGEFFL-ESSDKRVVL 329 (366)
Q Consensus 267 ~~~G~L~~~~~~~~~~~~~IW~l~-~--------~~W-------~~~~~i~~~~~~~~~~~~~~~g~i~~-~~~~~~~~~ 329 (366)
.-+|++.+... ....+.||-+. + ..| .....+.+ .....-+.+..+|.+++ ...++.+..
T Consensus 155 ~~~~~~l~~~~--~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~v~~~~~sp~~~~l~~~~~d~~i~i 231 (377)
T 3dwl_C 155 HPNNVLLAAGC--ADRKAYVLSAYVRDVDAKPEASVWGSRLPFNTVCAEYPS-GGWVHAVGFSPSGNALAYAGHDSSVTI 231 (377)
T ss_dssp CTTSSEEEEEE--SSSCEEEEEECCSSCC-CCCSCSSCSCCCEEEEEECCCC-SSSEEEEEECTTSSCEEEEETTTEEC-
T ss_pred cCCCCEEEEEe--CCCEEEEEEEEecccCCCccccccccccchhhhhhcccC-CceEEEEEECCCCCEEEEEeCCCcEEE
Confidence 22565544444 34789999885 1 122 22222211 12223345556776544 445788999
Q ss_pred EECCCCeE
Q 039662 330 YDSTYQEM 337 (366)
Q Consensus 330 yd~~~~~~ 337 (366)
||+++++.
T Consensus 232 wd~~~~~~ 239 (377)
T 3dwl_C 232 AYPSAPEQ 239 (377)
T ss_dssp CEECSTTS
T ss_pred EECCCCCC
Confidence 99888753
No 53
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=74.78 E-value=44 Score=29.38 Aligned_cols=112 Identities=8% Similarity=0.018 Sum_probs=56.8
Q ss_pred eeecceEEEeecCCeEEEEeCCCcceeec-CCCCCCCCCcccccceeeEEeecCCCCCeEEEEEEeeecccCCCCCCcce
Q 039662 103 GPYDGIFCLLKSHTLINLWNVSLNEYRVI-PECRPRLPLYTKTHYANVALGLDPVTKDFKLVLILTLWNDHRDSFHDFSH 181 (366)
Q Consensus 103 ~s~~GLl~~~~~~~~~~V~NP~T~~~~~L-P~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~~~~~ 181 (366)
...+|.|.+....+.++.+|+.|++.+.- +.....................+. + +|+.... + -.
T Consensus 50 ~v~~~~v~~~~~~g~v~a~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~---~-~v~v~~~------~-----g~ 114 (376)
T 3q7m_A 50 ALADNVVYAADRAGLVKALNADDGKEIWSVSLAEKDGWFSKEPALLSGGVTVSG---G-HVYIGSE------K-----AQ 114 (376)
T ss_dssp EEETTEEEEECTTSEEEEEETTTCCEEEEEECCC---CCSCCCCCEEEEEEEET---T-EEEEEET------T-----SE
T ss_pred EEECCEEEEEcCCCeEEEEEccCCceeeeecCccccccccccCcccccCceEeC---C-EEEEEcC------C-----CE
Confidence 33567777666665688899998886632 211110000000011112222222 1 2332221 1 25
Q ss_pred EEEEEcCCC--ceeecCCCccccceeecccceEEECceEEEEEecCCCceEEEEEeCCCce
Q 039662 182 VAVYKFSTN--SWRDLEGFEMRYDYMVDRIFNVYLNGFCYWVVCRPDYSKAILSFSMSDEV 240 (366)
Q Consensus 182 ~~vyss~~~--~W~~~~~~~~~~~~~~~~~~~v~~~G~lywl~~~~~~~~~Il~fD~~~~~ 240 (366)
+..++..++ .|+... +.. ....++..+|.+|... . ...|.+||.++++
T Consensus 115 l~a~d~~tG~~~W~~~~--~~~-----~~~~p~~~~~~v~v~~--~--~g~l~~~d~~tG~ 164 (376)
T 3q7m_A 115 VYALNTSDGTVAWQTKV--AGE-----ALSRPVVSDGLVLIHT--S--NGQLQALNEADGA 164 (376)
T ss_dssp EEEEETTTCCEEEEEEC--SSC-----CCSCCEEETTEEEEEC--T--TSEEEEEETTTCC
T ss_pred EEEEECCCCCEEEEEeC--CCc-----eEcCCEEECCEEEEEc--C--CCeEEEEECCCCc
Confidence 677787766 576642 111 1234566788887754 2 3479999998765
No 54
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=74.34 E-value=39 Score=28.61 Aligned_cols=189 Identities=9% Similarity=0.026 Sum_probs=90.9
Q ss_pred eEEEeecCCeEEEEeCCCcceee-cCCCCCCCCCcccccceeeEEeecCCCCCeEEEEEEeeecccCCCCCCcceEEEEE
Q 039662 108 IFCLLKSHTLINLWNVSLNEYRV-IPECRPRLPLYTKTHYANVALGLDPVTKDFKLVLILTLWNDHRDSFHDFSHVAVYK 186 (366)
Q Consensus 108 Ll~~~~~~~~~~V~NP~T~~~~~-LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~~vys 186 (366)
+|.....+..++++|+.|++.+. ++...... .....+.|..+ ++. .. + -.+..|+
T Consensus 7 ~lv~~~~~~~v~~~d~~tG~~~w~~~~~~~~~---------~~~~~~~pdG~---ilv-s~------~-----~~V~~~d 62 (276)
T 3no2_A 7 LLVGGSGWNKIAIINKDTKEIVWEYPLEKGWE---------CNSVAATKAGE---ILF-SY------S-----KGAKMIT 62 (276)
T ss_dssp EEEECTTCSEEEEEETTTTEEEEEEECCTTCC---------CCEEEECTTSC---EEE-EC------B-----SEEEEEC
T ss_pred EEEeeCCCCEEEEEECCCCeEEEEeCCCccCC---------CcCeEECCCCC---EEE-eC------C-----CCEEEEC
Confidence 34444445679999998988774 44432100 12233444332 222 21 1 1567777
Q ss_pred cCCC--ceeecCCCccccceeecccceEEECceEEEEEecCCCceEEEEEeCCCceeeEeCCCCCCCCCCccccccccce
Q 039662 187 FSTN--SWRDLEGFEMRYDYMVDRIFNVYLNGFCYWVVCRPDYSKAILSFSMSDEVFEEMEGPSVPQSTTYYQSVKTPWM 264 (366)
Q Consensus 187 s~~~--~W~~~~~~~~~~~~~~~~~~~v~~~G~lywl~~~~~~~~~Il~fD~~~~~~~~i~~P~~~~~~~~~~~l~~~~~ 264 (366)
. ++ .|+... +... . .....+.-||.++.... .....|+.||.+.+....+.+............. .
T Consensus 63 ~-~G~~~W~~~~--~~~~-~--~~~~~~~~dG~~lv~~~--~~~~~v~~vd~~Gk~l~~~~~~~~~~~~~~~~~~----v 130 (276)
T 3no2_A 63 R-DGRELWNIAA--PAGC-E--MQTARILPDGNALVAWC--GHPSTILEVNMKGEVLSKTEFETGIERPHAQFRQ----I 130 (276)
T ss_dssp T-TSCEEEEEEC--CTTC-E--EEEEEECTTSCEEEEEE--STTEEEEEECTTSCEEEEEEECCSCSSGGGSCSC----C
T ss_pred C-CCCEEEEEcC--CCCc-c--ccccEECCCCCEEEEec--CCCCEEEEEeCCCCEEEEEeccCCCCcccccccC----c
Confidence 6 43 576552 1000 1 01223345777766542 1145788999866544445443321111000111 0
Q ss_pred eeEecCeEEEEEeCCCCCEEEEEEeeC-CeeeEEEEecCCCcceeeEEEeeCCeEEEEEc-CCeEEEEECCCCeEEE
Q 039662 265 LGTYDDCLSLLYSDSFAHTFELWTMTG-GNWTKHSTFGPFIETYQPIGFWRKGEFFLESS-DKRVVLYDSTYQEMRD 339 (366)
Q Consensus 265 ~~~~~G~L~~~~~~~~~~~~~IW~l~~-~~W~~~~~i~~~~~~~~~~~~~~~g~i~~~~~-~~~~~~yd~~~~~~~~ 339 (366)
....+|.+.++.. ....+..|-.+| ..|.... .. .... +....+|.+++... +.+++.+|++|+++.+
T Consensus 131 ~~~~~G~~lv~~~--~~~~v~~~d~~G~~~w~~~~--~~--~~~~-~~~~~~g~~~v~~~~~~~v~~~d~~tG~~~w 200 (276)
T 3no2_A 131 NKNKKGNYLVPLF--ATSEVREIAPNGQLLNSVKL--SG--TPFS-SAFLDNGDCLVACGDAHCFVQLNLESNRIVR 200 (276)
T ss_dssp EECTTSCEEEEET--TTTEEEEECTTSCEEEEEEC--SS--CCCE-EEECTTSCEEEECBTTSEEEEECTTTCCEEE
T ss_pred eECCCCCEEEEec--CCCEEEEECCCCCEEEEEEC--CC--Cccc-eeEcCCCCEEEEeCCCCeEEEEeCcCCcEEE
Confidence 0223566555443 334555554443 4454322 11 1111 22345677776654 5689999999776644
No 55
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=73.69 E-value=38 Score=28.19 Aligned_cols=194 Identities=11% Similarity=0.044 Sum_probs=97.3
Q ss_pred eeecceEEEeec-CCeEEEEeCCCcceeecCCCCCCCCCcccccceeeEEeecCCCCCeEEEEEEeeecccCCCCCCcce
Q 039662 103 GPYDGIFCLLKS-HTLINLWNVSLNEYRVIPECRPRLPLYTKTHYANVALGLDPVTKDFKLVLILTLWNDHRDSFHDFSH 181 (366)
Q Consensus 103 ~s~~GLl~~~~~-~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~~~~~ 181 (366)
...+|-+.+... ...++++||. ++...+..+.. .....++.+|+... + .+.. . ..-.
T Consensus 64 ~~~~g~l~v~~~~~~~i~~~~~~-g~~~~~~~~~~--------~~~~~~i~~~~~g~---l-~v~~------~---~~~~ 121 (299)
T 2z2n_A 64 ISSDGEVWFTENAANKIGRITKK-GIIKEYTLPNP--------DSAPYGITEGPNGD---I-WFTE------M---NGNR 121 (299)
T ss_dssp ECTTSCEEEEETTTTEEEEECTT-SCEEEEECSST--------TCCEEEEEECTTSC---E-EEEE------T---TTTE
T ss_pred ECCCCCEEEeCCCCCeEEEECCC-CcEEEEeCCCc--------CCCceeeEECCCCC---E-EEEe------c---CCce
Confidence 345677766654 4569999986 55544432211 11235677776432 2 2222 0 0125
Q ss_pred EEEEEcCCCceeecCCCccccceeecccceEEE--CceEEEEEecCCCceEEEEEeCCCceeeEeCCCCCCCCCCccccc
Q 039662 182 VAVYKFSTNSWRDLEGFEMRYDYMVDRIFNVYL--NGFCYWVVCRPDYSKAILSFSMSDEVFEEMEGPSVPQSTTYYQSV 259 (366)
Q Consensus 182 ~~vyss~~~~W~~~~~~~~~~~~~~~~~~~v~~--~G~lywl~~~~~~~~~Il~fD~~~~~~~~i~~P~~~~~~~~~~~l 259 (366)
+.+|+. ++..+... .+... ....++.. +|.+|... . ....|..+|. ++++..+.+|.... ....+
T Consensus 122 i~~~d~-~g~~~~~~-~~~~~----~~~~~i~~~~~g~l~v~~--~-~~~~i~~~~~-~g~~~~~~~~~~~~---~~~~i 188 (299)
T 2z2n_A 122 IGRITD-DGKIREYE-LPNKG----SYPSFITLGSDNALWFTE--N-QNNAIGRITE-SGDITEFKIPTPAS---GPVGI 188 (299)
T ss_dssp EEEECT-TCCEEEEE-CSSTT----CCEEEEEECTTSCEEEEE--T-TTTEEEEECT-TCCEEEEECSSTTC---CEEEE
T ss_pred EEEECC-CCCEEEec-CCCCC----CCCceEEEcCCCCEEEEe--C-CCCEEEEEcC-CCcEEEeeCCCCCC---cceeE
Confidence 566666 55544431 11100 01123333 57776654 2 2347999999 77777665554321 11122
Q ss_pred cccceeeE-ecCeEEEEEeCCCCCEEEEEEeeCCeeeEEEEecCCCcceeeEEEeeCCeEEEEE-cCCeEEEEECCCCeE
Q 039662 260 KTPWMLGT-YDDCLSLLYSDSFAHTFELWTMTGGNWTKHSTFGPFIETYQPIGFWRKGEFFLES-SDKRVVLYDSTYQEM 337 (366)
Q Consensus 260 ~~~~~~~~-~~G~L~~~~~~~~~~~~~IW~l~~~~W~~~~~i~~~~~~~~~~~~~~~g~i~~~~-~~~~~~~yd~~~~~~ 337 (366)
.. -+|.|.+... ....+.+|-. ...... ...........-+.+..+|.+++.. ..+.+..||+ ++++
T Consensus 189 ------~~~~~g~l~v~~~--~~~~i~~~~~-~g~~~~-~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~d~-~g~~ 257 (299)
T 2z2n_A 189 ------TKGNDDALWFVEI--IGNKIGRITT-SGEITE-FKIPTPNARPHAITAGAGIDLWFTEWGANKIGRLTS-NNII 257 (299)
T ss_dssp ------EECTTSSEEEEET--TTTEEEEECT-TCCEEE-EECSSTTCCEEEEEECSTTCEEEEETTTTEEEEEET-TTEE
T ss_pred ------EECCCCCEEEEcc--CCceEEEECC-CCcEEE-EECCCCCCCceeEEECCCCCEEEeccCCceEEEECC-CCce
Confidence 32 3577766653 2344444433 333222 2222111122334455677888776 3688999999 5666
Q ss_pred EEEEE
Q 039662 338 RDIRI 342 (366)
Q Consensus 338 ~~i~~ 342 (366)
+.+.+
T Consensus 258 ~~~~~ 262 (299)
T 2z2n_A 258 EEYPI 262 (299)
T ss_dssp EEEEC
T ss_pred EEEeC
Confidence 66554
No 56
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=73.69 E-value=40 Score=28.40 Aligned_cols=201 Identities=7% Similarity=-0.080 Sum_probs=92.4
Q ss_pred eeecceEEEeec-CCeEEEEeCCCcceeecCCCCCCCCCcccccceeeEEeecCCCCCeEEEEEEee-ec---cc---CC
Q 039662 103 GPYDGIFCLLKS-HTLINLWNVSLNEYRVIPECRPRLPLYTKTHYANVALGLDPVTKDFKLVLILTL-WN---DH---RD 174 (366)
Q Consensus 103 ~s~~GLl~~~~~-~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~-~~---~~---~~ 174 (366)
-+.+|.+.+... ...+.++||.|++...+....... .......+.+|+..+ +.+... +. .. ..
T Consensus 76 ~~~dg~l~v~~~~~~~i~~~d~~~g~~~~~~~~~~~~-----~~~~~~~i~~d~~G~----l~vtd~~~g~~~~~~~~~~ 146 (296)
T 3e5z_A 76 LNKQGHLIACSHGLRRLERQREPGGEWESIADSFEGK-----KLNSPNDVCLAPDGS----LWFSDPTYGIDKPEEGYGG 146 (296)
T ss_dssp ECTTCCEEEEETTTTEEEEECSTTCCEEEEECEETTE-----ECCCCCCEEECTTSC----EEEEECSHHHHCGGGSSCC
T ss_pred ECCCCcEEEEecCCCeEEEEcCCCCcEEEEeeccCCC-----CCCCCCCEEECCCCC----EEEECCccccccccccccc
Confidence 445676666654 356999999999987764322110 011123466676443 222110 00 00 00
Q ss_pred -CCCCcceEEEEEcCCCceeecCCCccccceeecccceEEE--CceEEEEEecCCCceEEEEEeCC-Ccee-eEeC-CCC
Q 039662 175 -SFHDFSHVAVYKFSTNSWRDLEGFEMRYDYMVDRIFNVYL--NGFCYWVVCRPDYSKAILSFSMS-DEVF-EEME-GPS 248 (366)
Q Consensus 175 -~~~~~~~~~vyss~~~~W~~~~~~~~~~~~~~~~~~~v~~--~G~lywl~~~~~~~~~Il~fD~~-~~~~-~~i~-~P~ 248 (366)
.....-.+..|+.. +.-+.+. ... ....++.+ +|.++ .+ ......|..||+. ++++ .... +..
T Consensus 147 ~~~~~~~~l~~~~~~-g~~~~~~---~~~----~~~~gi~~s~dg~~l-v~--~~~~~~i~~~~~~~~g~~~~~~~~~~~ 215 (296)
T 3e5z_A 147 EMELPGRWVFRLAPD-GTLSAPI---RDR----VKPNGLAFLPSGNLL-VS--DTGDNATHRYCLNARGETEYQGVHFTV 215 (296)
T ss_dssp CCCSSSCEEEEECTT-SCEEEEE---CCC----SSEEEEEECTTSCEE-EE--ETTTTEEEEEEECSSSCEEEEEEEECC
T ss_pred cccCCCcEEEEECCC-CCEEEee---cCC----CCCccEEECCCCCEE-EE--eCCCCeEEEEEECCCCcCcCCCeEeeC
Confidence 00011133344443 4333321 000 11233433 57766 43 2224578899986 4554 1111 111
Q ss_pred CCCCCCccccccccceeeEecCeEEEEEeCCCCCEEEEEEeeCCeeeEEEEecCCCcceeeEEEe-eCCeEEEEEcCCeE
Q 039662 249 VPQSTTYYQSVKTPWMLGTYDDCLSLLYSDSFAHTFELWTMTGGNWTKHSTFGPFIETYQPIGFW-RKGEFFLESSDKRV 327 (366)
Q Consensus 249 ~~~~~~~~~~l~~~~~~~~~~G~L~~~~~~~~~~~~~IW~l~~~~W~~~~~i~~~~~~~~~~~~~-~~g~i~~~~~~~~~ 327 (366)
.... ...+ ...-+|.|.+.. ...+.+|-.++. -.. .+..... ..-+.+. .++..+++.....+
T Consensus 216 ~~~~---p~~i-----~~d~~G~l~v~~----~~~v~~~~~~g~-~~~--~~~~~~~-~~~~~f~~~d~~~L~v~t~~~l 279 (296)
T 3e5z_A 216 EPGK---TDGL-----RVDAGGLIWASA----GDGVHVLTPDGD-ELG--RVLTPQT-TSNLCFGGPEGRTLYMTVSTEF 279 (296)
T ss_dssp SSSC---CCSE-----EEBTTSCEEEEE----TTEEEEECTTSC-EEE--EEECSSC-CCEEEEESTTSCEEEEEETTEE
T ss_pred CCCC---CCeE-----EECCCCCEEEEc----CCeEEEECCCCC-EEE--EEECCCC-ceeEEEECCCCCEEEEEcCCeE
Confidence 1100 1122 133477877766 245555543332 222 2322222 2333443 45555555556899
Q ss_pred EEEECCCCeEEE
Q 039662 328 VLYDSTYQEMRD 339 (366)
Q Consensus 328 ~~yd~~~~~~~~ 339 (366)
+.+++++++++.
T Consensus 280 ~~~~~~~~~~~~ 291 (296)
T 3e5z_A 280 WSIETNVRGLEH 291 (296)
T ss_dssp EEEECSCCBCCC
T ss_pred EEEEcccccccc
Confidence 999999998764
No 57
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=73.12 E-value=40 Score=28.15 Aligned_cols=203 Identities=10% Similarity=0.090 Sum_probs=102.2
Q ss_pred eeecceEEEee-cCCeEEEEeCCCcceeecCCCCCCCCCcccccceeeEEeecCCCCCeEEEEEEeeecccCCCCCCcce
Q 039662 103 GPYDGIFCLLK-SHTLINLWNVSLNEYRVIPECRPRLPLYTKTHYANVALGLDPVTKDFKLVLILTLWNDHRDSFHDFSH 181 (366)
Q Consensus 103 ~s~~GLl~~~~-~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~~~~~ 181 (366)
-+.+|-+.+.. ....+.++||..+....++....... ......++.+++..+ +++.... . ..-.
T Consensus 37 ~~~~g~l~v~~~~~~~i~~~d~~g~~~~~~~~~~~~~~----~~~~p~~i~~~~~~g--~l~v~~~-----~----~~~~ 101 (286)
T 1q7f_A 37 VNAQNDIIVADTNNHRIQIFDKEGRFKFQFGECGKRDS----QLLYPNRVAVVRNSG--DIIVTER-----S----PTHQ 101 (286)
T ss_dssp ECTTCCEEEEEGGGTEEEEECTTSCEEEEECCBSSSTT----CBSSEEEEEEETTTT--EEEEEEC-----G----GGCE
T ss_pred ECCCCCEEEEECCCCEEEEECCCCcEEEEecccCCCcc----cccCceEEEEEcCCC--eEEEEcC-----C----CCCE
Confidence 34456666654 34569999998766666654321100 111235666643322 2222221 0 0126
Q ss_pred EEEEEcCCCceeecCCCccccceeecccceEEE--CceEEEEEecCCCceEEEEEeCCCceeeEeCCCCCCCCCCccccc
Q 039662 182 VAVYKFSTNSWRDLEGFEMRYDYMVDRIFNVYL--NGFCYWVVCRPDYSKAILSFSMSDEVFEEMEGPSVPQSTTYYQSV 259 (366)
Q Consensus 182 ~~vyss~~~~W~~~~~~~~~~~~~~~~~~~v~~--~G~lywl~~~~~~~~~Il~fD~~~~~~~~i~~P~~~~~~~~~~~l 259 (366)
+.+|+.....-+.+.. . ... ...++.+ +|.+|... .....|..||.+.+....+..+.... ....+
T Consensus 102 i~~~d~~g~~~~~~~~-~-~~~----~~~~i~~~~~g~l~v~~---~~~~~i~~~~~~g~~~~~~~~~~~~~---~p~~i 169 (286)
T 1q7f_A 102 IQIYNQYGQFVRKFGA-T-ILQ----HPRGVTVDNKGRIIVVE---CKVMRVIIFDQNGNVLHKFGCSKHLE---FPNGV 169 (286)
T ss_dssp EEEECTTSCEEEEECT-T-TCS----CEEEEEECTTSCEEEEE---TTTTEEEEECTTSCEEEEEECTTTCS---SEEEE
T ss_pred EEEECCCCcEEEEecC-c-cCC----CceEEEEeCCCCEEEEE---CCCCEEEEEcCCCCEEEEeCCCCccC---CcEEE
Confidence 6777743332222310 0 000 1122333 68776653 22357999998776665554332211 11122
Q ss_pred cccceeeEecCeEEEEEeCCCCCEEEEEEeeCCeeeEEEEecCCC--cceeeEEEeeCCeEEEEEc-CC-eEEEEECCCC
Q 039662 260 KTPWMLGTYDDCLSLLYSDSFAHTFELWTMTGGNWTKHSTFGPFI--ETYQPIGFWRKGEFFLESS-DK-RVVLYDSTYQ 335 (366)
Q Consensus 260 ~~~~~~~~~~G~L~~~~~~~~~~~~~IW~l~~~~W~~~~~i~~~~--~~~~~~~~~~~g~i~~~~~-~~-~~~~yd~~~~ 335 (366)
...-+|.|++... ....+.+|-.++. ....+.... ....-+++..+|.+++... ++ .+..||.+.+
T Consensus 170 -----~~~~~g~l~v~~~--~~~~i~~~~~~g~---~~~~~~~~g~~~~p~~i~~d~~G~l~v~~~~~~~~i~~~~~~g~ 239 (286)
T 1q7f_A 170 -----VVNDKQEIFISDN--RAHCVKVFNYEGQ---YLRQIGGEGITNYPIGVGINSNGEILIADNHNNFNLTIFTQDGQ 239 (286)
T ss_dssp -----EECSSSEEEEEEG--GGTEEEEEETTCC---EEEEESCTTTSCSEEEEEECTTCCEEEEECSSSCEEEEECTTSC
T ss_pred -----EECCCCCEEEEEC--CCCEEEEEcCCCC---EEEEEccCCccCCCcEEEECCCCCEEEEeCCCCEEEEEECCCCC
Confidence 1233678776654 3456777654432 122333221 1223355566788887765 43 8999998887
Q ss_pred eEEEEEE
Q 039662 336 EMRDIRI 342 (366)
Q Consensus 336 ~~~~i~~ 342 (366)
.+..+..
T Consensus 240 ~~~~~~~ 246 (286)
T 1q7f_A 240 LISALES 246 (286)
T ss_dssp EEEEEEE
T ss_pred EEEEEcc
Confidence 7777654
No 58
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=72.79 E-value=38 Score=27.83 Aligned_cols=201 Identities=13% Similarity=-0.006 Sum_probs=96.7
Q ss_pred eeecceEEEeecCCeEEEEeCCC-cceeecCCCCCCCCCcccccceeeEEeecCCCCCeEEEEEEeeecccCCCCCCcce
Q 039662 103 GPYDGIFCLLKSHTLINLWNVSL-NEYRVIPECRPRLPLYTKTHYANVALGLDPVTKDFKLVLILTLWNDHRDSFHDFSH 181 (366)
Q Consensus 103 ~s~~GLl~~~~~~~~~~V~NP~T-~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~~~~~ 181 (366)
-+-+|-.++......++++|..+ ++...+...... .....+.+.|... .++.... .......
T Consensus 49 ~spdg~~l~~~~~~~i~~~d~~~~~~~~~~~~~~~~--------~~~~~~~~spdg~--~l~~~~~-------~~~~~~~ 111 (297)
T 2ojh_A 49 WSPDGKYLLLNSEGLLYRLSLAGDPSPEKVDTGFAT--------ICNNDHGISPDGA--LYAISDK-------VEFGKSA 111 (297)
T ss_dssp ECTTSSEEEEEETTEEEEEESSSCCSCEECCCTTCC--------CBCSCCEECTTSS--EEEEEEC-------TTTSSCE
T ss_pred ECCCCCEEEEEcCCeEEEEeCCCCCCceEecccccc--------ccccceEECCCCC--EEEEEEe-------CCCCcce
Confidence 34445444444455699999999 887766543311 0113345555432 2332221 1113345
Q ss_pred EEEEEcCCCceeecCCCccccceeecccceEEECce-EEEEEecCCCceEEEEEeCCCceeeEeCCCCCCCCCCcccccc
Q 039662 182 VAVYKFSTNSWRDLEGFEMRYDYMVDRIFNVYLNGF-CYWVVCRPDYSKAILSFSMSDEVFEEMEGPSVPQSTTYYQSVK 260 (366)
Q Consensus 182 ~~vyss~~~~W~~~~~~~~~~~~~~~~~~~v~~~G~-lywl~~~~~~~~~Il~fD~~~~~~~~i~~P~~~~~~~~~~~l~ 260 (366)
+.+++..++.-+.+..... .. .....-+|. +++... .++...|..+|+.+.....+...... ...+
T Consensus 112 l~~~~~~~~~~~~~~~~~~-~~-----~~~~spdg~~l~~~~~-~~~~~~l~~~~~~~~~~~~~~~~~~~-----~~~~- 178 (297)
T 2ojh_A 112 IYLLPSTGGTPRLMTKNLP-SY-----WHGWSPDGKSFTYCGI-RDQVFDIYSMDIDSGVETRLTHGEGR-----NDGP- 178 (297)
T ss_dssp EEEEETTCCCCEECCSSSS-EE-----EEEECTTSSEEEEEEE-ETTEEEEEEEETTTCCEEECCCSSSC-----EEEE-
T ss_pred EEEEECCCCceEEeecCCC-cc-----ceEECCCCCEEEEEEC-CCCceEEEEEECCCCcceEcccCCCc-----cccc-
Confidence 6666666665555421111 00 001111454 333332 23345677777877666544221111 1111
Q ss_pred ccceeeEecCeEEEEEeCCCCCEEEEEEee-C-CeeeEEEEecCCCcceeeEEEeeCCeEE-EEEcC-----------Ce
Q 039662 261 TPWMLGTYDDCLSLLYSDSFAHTFELWTMT-G-GNWTKHSTFGPFIETYQPIGFWRKGEFF-LESSD-----------KR 326 (366)
Q Consensus 261 ~~~~~~~~~G~L~~~~~~~~~~~~~IW~l~-~-~~W~~~~~i~~~~~~~~~~~~~~~g~i~-~~~~~-----------~~ 326 (366)
...-+|+..++... ....+.||.++ . ... ..+.........+.+..+|+.+ +...+ ..
T Consensus 179 ----~~s~dg~~l~~~~~-~~~~~~i~~~~~~~~~~---~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~ 250 (297)
T 2ojh_A 179 ----DYSPDGRWIYFNSS-RTGQMQIWRVRVDGSSV---ERITDSAYGDWFPHPSPSGDKVVFVSYDADVFDHPRDLDVR 250 (297)
T ss_dssp ----EECTTSSEEEEEEC-TTSSCEEEEEETTSSCE---EECCCCSEEEEEEEECTTSSEEEEEEEETTCCSCCSSEEEE
T ss_pred ----eECCCCCEEEEEec-CCCCccEEEECCCCCCc---EEEecCCcccCCeEECCCCCEEEEEEcCCCCCcccccCceE
Confidence 02236664433331 34578999988 3 322 2222212222334555677644 44332 46
Q ss_pred EEEEECCCCeEEEEE
Q 039662 327 VVLYDSTYQEMRDIR 341 (366)
Q Consensus 327 ~~~yd~~~~~~~~i~ 341 (366)
+..||+++++.+.+.
T Consensus 251 l~~~d~~~~~~~~~~ 265 (297)
T 2ojh_A 251 VQLMDMDGGNVETLF 265 (297)
T ss_dssp EEEEETTSCSCEEEE
T ss_pred EEEEecCCCCceeee
Confidence 999999998776554
No 59
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=72.69 E-value=40 Score=28.04 Aligned_cols=194 Identities=10% Similarity=0.104 Sum_probs=98.0
Q ss_pred EE-eeecceEEEeec-CCeEEEEeCCCcceeecCCCCCCCCCcccccceeeEEeecCCCCCeEEEEEEeeecccCCCCCC
Q 039662 101 HI-GPYDGIFCLLKS-HTLINLWNVSLNEYRVIPECRPRLPLYTKTHYANVALGLDPVTKDFKLVLILTLWNDHRDSFHD 178 (366)
Q Consensus 101 ~i-~s~~GLl~~~~~-~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~~ 178 (366)
.+ ...+|-+.+... .+.+.++||. ++...++.+.. .....++..|+... + .+.. . .
T Consensus 24 ~i~~d~~g~l~v~~~~~~~v~~~~~~-~~~~~~~~~~~--------~~~~~~i~~~~~g~---l-~v~~------~---~ 81 (300)
T 2qc5_A 24 GITSSEDGKVWFTQHKANKISSLDQS-GRIKEFEVPTP--------DAKVMCLIVSSLGD---I-WFTE------N---G 81 (300)
T ss_dssp EEEECTTSCEEEEETTTTEEEEECTT-SCEEEEECSST--------TCCEEEEEECTTSC---E-EEEE------T---T
T ss_pred eeeECCCCCEEEEcCCCCeEEEECCC-CceEEEECCCC--------CCcceeEEECCCCC---E-EEEe------c---C
Confidence 34 445676666653 4569999998 77666543221 11235667775432 2 2222 1 1
Q ss_pred cceEEEEEcCCCceeecCCCccccceeecccceEEE--CceEEEEEecCCCceEEEEEeCCCceeeEeCCCCCCCCCCcc
Q 039662 179 FSHVAVYKFSTNSWRDLEGFEMRYDYMVDRIFNVYL--NGFCYWVVCRPDYSKAILSFSMSDEVFEEMEGPSVPQSTTYY 256 (366)
Q Consensus 179 ~~~~~vyss~~~~W~~~~~~~~~~~~~~~~~~~v~~--~G~lywl~~~~~~~~~Il~fD~~~~~~~~i~~P~~~~~~~~~ 256 (366)
.-.+..|+.. +..+... .+... ....++.+ +|.+|+.. .....|..+|.+ ++...+.+|.... ..
T Consensus 82 ~~~v~~~d~~-g~~~~~~-~~~~~----~~~~~i~~~~~g~l~v~~---~~~~~i~~~~~~-g~~~~~~~~~~~~---~~ 148 (300)
T 2qc5_A 82 ANKIGKLSKK-GGFTEYP-LPQPD----SGPYGITEGLNGDIWFTQ---LNGDRIGKLTAD-GTIYEYDLPNKGS---YP 148 (300)
T ss_dssp TTEEEEECTT-SCEEEEE-CSSTT----CCEEEEEECSTTCEEEEE---TTTTEEEEECTT-SCEEEEECSSTTC---CE
T ss_pred CCeEEEECCC-CCeEEec-CCCCC----CCCccceECCCCCEEEEc---cCCCeEEEECCC-CCEEEccCCCCCC---Cc
Confidence 1256677766 6655441 11110 11123333 57776654 223479999998 6666665553221 11
Q ss_pred ccccccceeeE-ecCeEEEEEeCCCCCEEEEEEee-CCeeeEEEEecCCCcceeeEEEeeCCeEEEEEc-CCeEEEEECC
Q 039662 257 QSVKTPWMLGT-YDDCLSLLYSDSFAHTFELWTMT-GGNWTKHSTFGPFIETYQPIGFWRKGEFFLESS-DKRVVLYDST 333 (366)
Q Consensus 257 ~~l~~~~~~~~-~~G~L~~~~~~~~~~~~~IW~l~-~~~W~~~~~i~~~~~~~~~~~~~~~g~i~~~~~-~~~~~~yd~~ 333 (366)
..+ .. -+|+|.+... .... |+.++ ...... ...+.......-+.+..+|.+++... .+.+..||+
T Consensus 149 ~~i------~~d~~g~l~v~~~--~~~~--i~~~~~~g~~~~-~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~- 216 (300)
T 2qc5_A 149 AFI------TLGSDNALWFTEN--QNNS--IGRITNTGKLEE-YPLPTNAAAPVGITSGNDGALWFVEIMGNKIGRITT- 216 (300)
T ss_dssp EEE------EECTTSSEEEEET--TTTE--EEEECTTCCEEE-EECSSTTCCEEEEEECTTSSEEEEETTTTEEEEECT-
T ss_pred eeE------EECCCCCEEEEec--CCCe--EEEECCCCcEEE-eeCCCCCCCcceEEECCCCCEEEEccCCCEEEEEcC-
Confidence 222 22 3577766653 2233 44444 333332 22221111122344455677887765 467999998
Q ss_pred CCeEEEEE
Q 039662 334 YQEMRDIR 341 (366)
Q Consensus 334 ~~~~~~i~ 341 (366)
++++..+.
T Consensus 217 ~g~~~~~~ 224 (300)
T 2qc5_A 217 TGEISEYD 224 (300)
T ss_dssp TCCEEEEE
T ss_pred CCcEEEEE
Confidence 55555543
No 60
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=71.26 E-value=47 Score=28.20 Aligned_cols=70 Identities=10% Similarity=0.147 Sum_probs=45.0
Q ss_pred cCe-EEEEEeCCCCCEEEEEEee--CCeeeEEEEecCCCcceeeEEEeeCCeEEEEEc--CCeEEEE--ECCCCeEEEEE
Q 039662 269 DDC-LSLLYSDSFAHTFELWTMT--GGNWTKHSTFGPFIETYQPIGFWRKGEFFLESS--DKRVVLY--DSTYQEMRDIR 341 (366)
Q Consensus 269 ~G~-L~~~~~~~~~~~~~IW~l~--~~~W~~~~~i~~~~~~~~~~~~~~~g~i~~~~~--~~~~~~y--d~~~~~~~~i~ 341 (366)
+|+ |++... ....+.+|-++ +..+.....+..... ..-+.+..+|..++... ++.+..| |.++++++.+.
T Consensus 241 dg~~l~v~~~--~~~~i~v~d~~~~~~~~~~~~~~~~~~~-~~~~~~s~dg~~l~~~~~~~~~v~v~~~d~~~g~~~~~~ 317 (343)
T 1ri6_A 241 DGRHLYACDR--TASLITVFSVSEDGSVLSKEGFQPTETQ-PRGFNVDHSGKYLIAAGQKSHHISVYEIVGEQGLLHEKG 317 (343)
T ss_dssp TSSEEEEEET--TTTEEEEEEECTTSCCEEEEEEEECSSS-CCCEEECTTSSEEEEECTTTCEEEEEEEETTTTEEEEEE
T ss_pred CCCEEEEEec--CCCEEEEEEEcCCCCceEEeeeecCCCc-cceEEECCCCCEEEEecCCCCeEEEEEEcCCCceeeEcc
Confidence 565 443332 56789999998 466777766664323 34466677777554443 5777777 77788887765
No 61
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=71.14 E-value=71 Score=30.47 Aligned_cols=114 Identities=10% Similarity=0.104 Sum_probs=62.5
Q ss_pred cceEEECceEEEEEecCCCceEEEEEeC-CCce--eeEeCCCCCCC------CCCccccccccceeeEecCeEEEEEeCC
Q 039662 209 IFNVYLNGFCYWVVCRPDYSKAILSFSM-SDEV--FEEMEGPSVPQ------STTYYQSVKTPWMLGTYDDCLSLLYSDS 279 (366)
Q Consensus 209 ~~~v~~~G~lywl~~~~~~~~~Il~fD~-~~~~--~~~i~~P~~~~------~~~~~~~l~~~~~~~~~~G~L~~~~~~~ 279 (366)
..++..+|.+|... . ....|.++|. ++++ |+. +++.... .......+ ...+|+|++...+
T Consensus 56 ~~P~v~~g~vyv~~--~-~~~~v~AlD~~~tG~~~W~~-~~~~~~~~~~~~~~~~~~~~~------~~~~~~v~v~~~d- 124 (571)
T 2ad6_A 56 GAPLVIGDMMYVHS--A-FPNNTYALNLNDPGKIVWQH-KPKQDASTKAVMCCDVVDRGL------AYGAGQIVKKQAN- 124 (571)
T ss_dssp SCCEEETTEEEEEC--S-TTTCEEEEETTCTTSEEEEE-CCCCCGGGGGGCTTCSCCCCC------EEETTEEEEECTT-
T ss_pred cccEEECCEEEEEe--C-CCCEEEEEeCCCCccEEEEE-cCCCCcccccccccccccccc------EEECCEEEEEeCC-
Confidence 56678899999875 2 0236999999 6654 443 3332110 00001123 5567777665431
Q ss_pred CCCEEEEEEee---C-CeeeEEEEecCC-Ccc-eeeEEEeeCCeEEEEEc------CCeEEEEECCCCeEEE
Q 039662 280 FAHTFELWTMT---G-GNWTKHSTFGPF-IET-YQPIGFWRKGEFFLESS------DKRVVLYDSTYQEMRD 339 (366)
Q Consensus 280 ~~~~~~IW~l~---~-~~W~~~~~i~~~-~~~-~~~~~~~~~g~i~~~~~------~~~~~~yd~~~~~~~~ 339 (366)
. .+..++ | ..|.....-... ..+ ..|+. .++.+++... ++.++.||.+|++..+
T Consensus 125 --g--~l~alD~~tG~~~W~~~~~~~~~~~~~~~~P~v--~~g~v~vg~~~~~~~~~g~v~a~D~~tG~~~W 190 (571)
T 2ad6_A 125 --G--HLLALDAKTGKINWEVEVCDPKVGSTLTQAPFV--AKDTVLMGCSGAELGVRGAVNAFDLKTGELKW 190 (571)
T ss_dssp --S--EEEEEETTTCCEEEEEECCCGGGTCBCCSCCEE--ETTEEEEECBCGGGTCCCEEEEEETTTCCEEE
T ss_pred --C--EEEEEECCCCCEEEEecCCCCCccceeccCCEE--ECCEEEEEecCCccCCCCEEEEEECCCCcEEE
Confidence 2 344555 3 567654211000 011 23433 2567776654 5789999999988776
No 62
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=71.13 E-value=55 Score=28.95 Aligned_cols=199 Identities=10% Similarity=0.050 Sum_probs=97.3
Q ss_pred eEEEeecCCeEEEEeCCCcceee-cC-CCCCCCCCcccccceeeEEeecCCCCCeEEEEEEeeecccCCCCCCcceEEEE
Q 039662 108 IFCLLKSHTLINLWNVSLNEYRV-IP-ECRPRLPLYTKTHYANVALGLDPVTKDFKLVLILTLWNDHRDSFHDFSHVAVY 185 (366)
Q Consensus 108 Ll~~~~~~~~~~V~NP~T~~~~~-LP-~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~~vy 185 (366)
+++....++.+.|||..+++... +. ... ......+.+.|..+ .++.... + -.+.+|
T Consensus 146 ~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~---------~~~v~~~~~~~~~~--~l~~~~~------d-----~~i~iw 203 (402)
T 2aq5_A 146 VLLSAGCDNVILVWDVGTGAAVLTLGPDVH---------PDTIYSVDWSRDGA--LICTSCR------D-----KRVRVI 203 (402)
T ss_dssp EEEEEETTSCEEEEETTTTEEEEEECTTTC---------CSCEEEEEECTTSS--CEEEEET------T-----SEEEEE
T ss_pred EEEEEcCCCEEEEEECCCCCccEEEecCCC---------CCceEEEEECCCCC--EEEEEec------C-----CcEEEE
Confidence 44444555669999999887653 32 111 11235677776432 2222221 2 278889
Q ss_pred EcCCCceeecCCCccccceeecccceEE-ECceEEEEEecCCCceEEEEEeCCCcee--eEeCCCCCCCCCCcccccccc
Q 039662 186 KFSTNSWRDLEGFEMRYDYMVDRIFNVY-LNGFCYWVVCRPDYSKAILSFSMSDEVF--EEMEGPSVPQSTTYYQSVKTP 262 (366)
Q Consensus 186 ss~~~~W~~~~~~~~~~~~~~~~~~~v~-~~G~lywl~~~~~~~~~Il~fD~~~~~~--~~i~~P~~~~~~~~~~~l~~~ 262 (366)
+.+++.-...-. ...... ......+ -+|.+...+........|..+|+.+.+- ....++... ....+
T Consensus 204 d~~~~~~~~~~~-~~~~~~--~~~~~~~~~~~~~l~~g~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~----~v~~~--- 273 (402)
T 2aq5_A 204 EPRKGTVVAEKD-RPHEGT--RPVHAVFVSEGKILTTGFSRMSERQVALWDTKHLEEPLSLQELDTSS----GVLLP--- 273 (402)
T ss_dssp ETTTTEEEEEEE-CSSCSS--SCCEEEECSTTEEEEEEECTTCCEEEEEEETTBCSSCSEEEECCCCS----SCEEE---
T ss_pred eCCCCceeeeec-cCCCCC--cceEEEEcCCCcEEEEeccCCCCceEEEEcCccccCCceEEeccCCC----ceeEE---
Confidence 888764322100 000000 0011111 2455444432112356789999887542 222222211 11111
Q ss_pred ceeeEecCeEEEEEeCCCCCEEEEEEee-CCeee-EEEEecCCCcceeeEEEeeCCeEEEEEcCCeEEEEECCCCeEEEE
Q 039662 263 WMLGTYDDCLSLLYSDSFAHTFELWTMT-GGNWT-KHSTFGPFIETYQPIGFWRKGEFFLESSDKRVVLYDSTYQEMRDI 340 (366)
Q Consensus 263 ~~~~~~~G~L~~~~~~~~~~~~~IW~l~-~~~W~-~~~~i~~~~~~~~~~~~~~~g~i~~~~~~~~~~~yd~~~~~~~~i 340 (366)
...-+|+..++.. .....+.||-+. +..+. ........ ....-+.+..++.+++ ..+..+..|++.+++.+.+
T Consensus 274 --~~s~~~~~l~~~g-~~dg~i~i~d~~~~~~~~~~l~~~~~~-~~v~~~~~sp~~~~~~-s~~~~~~~~~l~~~~~~~i 348 (402)
T 2aq5_A 274 --FFDPDTNIVYLCG-KGDSSIRYFEITSEAPFLHYLSMFSSK-ESQRGMGYMPKRGLEV-NKCEIARFYKLHERKCEPI 348 (402)
T ss_dssp --EEETTTTEEEEEE-TTCSCEEEEEECSSTTCEEEEEEECCS-SCCSEEEECCGGGSCG-GGTEEEEEEEEETTEEEEE
T ss_pred --EEcCCCCEEEEEE-cCCCeEEEEEecCCCcceEeecccccC-CcccceEEecccccce-ecceeEEEEEcCCCcEEEE
Confidence 0233555444433 245789999998 44322 22223221 2223345556665543 3456788999999988877
Q ss_pred EEe
Q 039662 341 RIT 343 (366)
Q Consensus 341 ~~~ 343 (366)
.+.
T Consensus 349 ~~~ 351 (402)
T 2aq5_A 349 AMT 351 (402)
T ss_dssp EEE
T ss_pred EEE
Confidence 643
No 63
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=70.29 E-value=49 Score=28.03 Aligned_cols=101 Identities=7% Similarity=-0.041 Sum_probs=55.4
Q ss_pred CceEEEEEecCCCceEEEEEeCCCceeeEeCCCCCCCCCCccccccccceeeEecCeEEEEEeCCCCCEEEEEEee--CC
Q 039662 215 NGFCYWVVCRPDYSKAILSFSMSDEVFEEMEGPSVPQSTTYYQSVKTPWMLGTYDDCLSLLYSDSFAHTFELWTMT--GG 292 (366)
Q Consensus 215 ~G~lywl~~~~~~~~~Il~fD~~~~~~~~i~~P~~~~~~~~~~~l~~~~~~~~~~G~L~~~~~~~~~~~~~IW~l~--~~ 292 (366)
+|.+||.. .....|..+|.++.+...+..|... ..+ ...-+|+|.+.. ... |+.++ +.
T Consensus 24 ~~~l~~~d---~~~~~i~~~d~~~~~~~~~~~~~~~------~~i-----~~~~dG~l~v~~----~~~--l~~~d~~~g 83 (297)
T 3g4e_A 24 SNSLLFVD---IPAKKVCRWDSFTKQVQRVTMDAPV------SSV-----ALRQSGGYVATI----GTK--FCALNWKEQ 83 (297)
T ss_dssp TTEEEEEE---TTTTEEEEEETTTCCEEEEECSSCE------EEE-----EEBTTSSEEEEE----TTE--EEEEETTTT
T ss_pred CCEEEEEE---CCCCEEEEEECCCCcEEEEeCCCce------EEE-----EECCCCCEEEEE----CCe--EEEEECCCC
Confidence 48899985 2245799999999877766655322 112 022366755443 123 44444 35
Q ss_pred eeeEEEEecCCCcc--eeeEEEeeCCeEEEEEc------------CCeEEEEECCCC
Q 039662 293 NWTKHSTFGPFIET--YQPIGFWRKGEFFLESS------------DKRVVLYDSTYQ 335 (366)
Q Consensus 293 ~W~~~~~i~~~~~~--~~~~~~~~~g~i~~~~~------------~~~~~~yd~~~~ 335 (366)
.+............ ..-+.+..+|.+++... ...++.+|...+
T Consensus 84 ~~~~~~~~~~~~~~~~~~di~~d~dG~l~~~~~~~~~~~~~~~~~~~~l~~~d~~g~ 140 (297)
T 3g4e_A 84 SAVVLATVDNDKKNNRFNDGKVDPAGRYFAGTMAEETAPAVLERHQGALYSLFPDHH 140 (297)
T ss_dssp EEEEEEECCTTCSSEEEEEEEECTTSCEEEEEEECCSBTTBCCTTCEEEEEECTTSC
T ss_pred cEEEEEecCCCCCCCCCCCEEECCCCCEEEecCCcccccccccCCCcEEEEEECCCC
Confidence 55544443321111 23345566777777542 246888887643
No 64
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=69.19 E-value=52 Score=27.89 Aligned_cols=138 Identities=11% Similarity=0.077 Sum_probs=67.2
Q ss_pred eEEEEEcC--CCceeecCCCccccceeecccceEE--ECceEEEEEecCCCceEEEEEeCCCce-ee---EeCCCCCCCC
Q 039662 181 HVAVYKFS--TNSWRDLEGFEMRYDYMVDRIFNVY--LNGFCYWVVCRPDYSKAILSFSMSDEV-FE---EMEGPSVPQS 252 (366)
Q Consensus 181 ~~~vyss~--~~~W~~~~~~~~~~~~~~~~~~~v~--~~G~lywl~~~~~~~~~Il~fD~~~~~-~~---~i~~P~~~~~ 252 (366)
.+.+|+.. ++.++.+...+... ....+. -+|...+.+. . ....|..+|+.++. .. .++.....
T Consensus 61 ~v~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~s~dg~~l~~~~-~-~~~~i~~~d~~~~~~~~~~~~~~~~~~~-- 131 (343)
T 1ri6_A 61 RVLAYRIAPDDGALTFAAESALPG-----SLTHISTDHQGQFVFVGS-Y-NAGNVSVTRLEDGLPVGVVDVVEGLDGC-- 131 (343)
T ss_dssp EEEEEEECTTTCCEEEEEEEECSS-----CCSEEEECTTSSEEEEEE-T-TTTEEEEEEEETTEEEEEEEEECCCTTB--
T ss_pred eEEEEEecCCCCceeeccccccCC-----CCcEEEEcCCCCEEEEEe-c-CCCeEEEEECCCCccccccccccCCCCc--
Confidence 77888876 67777653222111 112222 2565333332 2 23357778873222 22 22221111
Q ss_pred CCccccccccceeeEecCe-EEEEEeCCCCCEEEEEEeeC-CeeeEEE--EecCC-CcceeeEEEeeCCe-EEEEE-cCC
Q 039662 253 TTYYQSVKTPWMLGTYDDC-LSLLYSDSFAHTFELWTMTG-GNWTKHS--TFGPF-IETYQPIGFWRKGE-FFLES-SDK 325 (366)
Q Consensus 253 ~~~~~~l~~~~~~~~~~G~-L~~~~~~~~~~~~~IW~l~~-~~W~~~~--~i~~~-~~~~~~~~~~~~g~-i~~~~-~~~ 325 (366)
..+ ...-+|+ |++... ....+.+|-++. ....... .+... .....-+.+..+|. +++.. .++
T Consensus 132 ----~~~-----~~s~dg~~l~~~~~--~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pdg~~l~~~~~~~~ 200 (343)
T 1ri6_A 132 ----HSA-----NISPDNRTLWVPAL--KQDRICLFTVSDDGHLVAQDPAEVTTVEGAGPRHMVFHPNEQYAYCVNELNS 200 (343)
T ss_dssp ----CCC-----EECTTSSEEEEEEG--GGTEEEEEEECTTSCEEEEEEEEEECSTTCCEEEEEECTTSSEEEEEETTTT
T ss_pred ----eEE-----EECCCCCEEEEecC--CCCEEEEEEecCCCceeeecccccccCCCCCcceEEECCCCCEEEEEeCCCC
Confidence 112 0223555 444332 356788998873 5555443 33221 11223355667776 44444 467
Q ss_pred eEEEEECC--CCeEE
Q 039662 326 RVVLYDST--YQEMR 338 (366)
Q Consensus 326 ~~~~yd~~--~~~~~ 338 (366)
.+..||++ +++++
T Consensus 201 ~i~~~~~~~~~g~~~ 215 (343)
T 1ri6_A 201 SVDVWELKDPHGNIE 215 (343)
T ss_dssp EEEEEESSCTTSCCE
T ss_pred EEEEEEecCCCCcEE
Confidence 89999984 45443
No 65
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=68.95 E-value=63 Score=28.73 Aligned_cols=113 Identities=5% Similarity=-0.062 Sum_probs=58.9
Q ss_pred CceEEEEEecCCCceEEEEEeCCCceeeEeCCCCCCCCCCcc-ccccccceeeEecCeEEEEEeCCCCCEEEEEEeeCCe
Q 039662 215 NGFCYWVVCRPDYSKAILSFSMSDEVFEEMEGPSVPQSTTYY-QSVKTPWMLGTYDDCLSLLYSDSFAHTFELWTMTGGN 293 (366)
Q Consensus 215 ~G~lywl~~~~~~~~~Il~fD~~~~~~~~i~~P~~~~~~~~~-~~l~~~~~~~~~~G~L~~~~~~~~~~~~~IW~l~~~~ 293 (366)
+|.++... .....|..+|+.+++......+......... ..+ ...-+|++.+... ....+.+|-++..+
T Consensus 133 ~~~~~~~~---~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~v~~~-----~~~~~~~~~~s~~--~d~~v~~~d~~~~~ 202 (433)
T 3bws_A 133 NTRLAIPL---LEDEGMDVLDINSGQTVRLSPPEKYKKKLGFVETI-----SIPEHNELWVSQM--QANAVHVFDLKTLA 202 (433)
T ss_dssp SSEEEEEB---TTSSSEEEEETTTCCEEEECCCHHHHTTCCEEEEE-----EEGGGTEEEEEEG--GGTEEEEEETTTCC
T ss_pred CCeEEEEe---CCCCeEEEEECCCCeEeeecCcccccccCCceeEE-----EEcCCCEEEEEEC--CCCEEEEEECCCce
Confidence 45555543 2233588999998776543211111011111 112 0222677666654 45788999877322
Q ss_pred eeEEEEecCCCcceeeEEEeeCCeEE-EEE-cCCeEEEEECCCCeEEE
Q 039662 294 WTKHSTFGPFIETYQPIGFWRKGEFF-LES-SDKRVVLYDSTYQEMRD 339 (366)
Q Consensus 294 W~~~~~i~~~~~~~~~~~~~~~g~i~-~~~-~~~~~~~yd~~~~~~~~ 339 (366)
...++........-+.+..++..+ +.. .++.+..||+++++...
T Consensus 203 --~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~i~~~d~~~~~~~~ 248 (433)
T 3bws_A 203 --YKATVDLTGKWSKILLYDPIRDLVYCSNWISEDISVIDRKTKLEIR 248 (433)
T ss_dssp --EEEEEECSSSSEEEEEEETTTTEEEEEETTTTEEEEEETTTTEEEE
T ss_pred --EEEEEcCCCCCeeEEEEcCCCCEEEEEecCCCcEEEEECCCCcEEE
Confidence 122222212223445556666654 444 37889999998886643
No 66
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=68.82 E-value=59 Score=31.71 Aligned_cols=114 Identities=14% Similarity=0.179 Sum_probs=62.2
Q ss_pred cceEEECceEEEEEecCCCceEEEEEeCCCce--eeEeCCCCCCCC------CCccccccccceeeEecCeEEEEEeCCC
Q 039662 209 IFNVYLNGFCYWVVCRPDYSKAILSFSMSDEV--FEEMEGPSVPQS------TTYYQSVKTPWMLGTYDDCLSLLYSDSF 280 (366)
Q Consensus 209 ~~~v~~~G~lywl~~~~~~~~~Il~fD~~~~~--~~~i~~P~~~~~------~~~~~~l~~~~~~~~~~G~L~~~~~~~~ 280 (366)
..++..+|.+|... . ...|.++|.++++ |+. +.+..... ......+ ...+|+|++...+
T Consensus 60 ~~P~v~~g~vyv~~--~--~~~v~AlD~~tG~~~W~~-~~~~~~~~~~~~~~~~~~~~~------~~~~~~v~v~~~d-- 126 (668)
T 1kv9_A 60 ATPLFHDGVIYTSM--S--WSRVIAVDAASGKELWRY-DPEVAKVKARTSCCDAVNRGV------ALWGDKVYVGTLD-- 126 (668)
T ss_dssp CCCEEETTEEEEEE--G--GGEEEEEETTTCCEEEEE-CCCCCGGGGGGCTTCSCCCCC------EEEBTEEEEECTT--
T ss_pred cCCEEECCEEEEEC--C--CCeEEEEECCCChhceEE-CCCCCccccccccccCCccce------EEECCEEEEEcCC--
Confidence 45678899999986 2 3469999988754 543 22221100 0001123 5567777665431
Q ss_pred CCEEEEEEee---C-CeeeEEEEecCC-Cc-ceeeEEEeeCCeEEEEEc------CCeEEEEECCCCeEEEE
Q 039662 281 AHTFELWTMT---G-GNWTKHSTFGPF-IE-TYQPIGFWRKGEFFLESS------DKRVVLYDSTYQEMRDI 340 (366)
Q Consensus 281 ~~~~~IW~l~---~-~~W~~~~~i~~~-~~-~~~~~~~~~~g~i~~~~~------~~~~~~yd~~~~~~~~i 340 (366)
. .|..++ | ..|.....-... .. ...|+. .++.+++... ++.++.||.+|++..+-
T Consensus 127 -g--~l~alD~~tG~~~W~~~~~~~~~~~~~~~~P~v--~~~~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~ 193 (668)
T 1kv9_A 127 -G--RLIALDAKTGKAIWSQQTTDPAKPYSITGAPRV--VKGKVIIGNGGAEYGVRGFVSAYDADTGKLAWR 193 (668)
T ss_dssp -S--EEEEEETTTCCEEEEEECSCTTSSCBCCSCCEE--ETTEEEECCBCTTTCCBCEEEEEETTTCCEEEE
T ss_pred -C--EEEEEECCCCCEeeeeccCCCCCcceecCCCEE--ECCEEEEeCCCCCcCCCCEEEEEECCCCcEEEE
Confidence 2 344555 3 567754311110 01 123432 3566666543 37899999999987763
No 67
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=68.53 E-value=96 Score=30.71 Aligned_cols=187 Identities=10% Similarity=0.055 Sum_probs=91.8
Q ss_pred EEEEeCCCcceeecCCCCCCCCCcccccceeeEEeecCCCCCeEEEEEEeeecccCCCCCCcceEEEEEcCCCceeecCC
Q 039662 118 INLWNVSLNEYRVIPECRPRLPLYTKTHYANVALGLDPVTKDFKLVLILTLWNDHRDSFHDFSHVAVYKFSTNSWRDLEG 197 (366)
Q Consensus 118 ~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~~vyss~~~~W~~~~~ 197 (366)
+..+||.++++..+...+.. .+. ......++..|...+ +.+.. . .-.+..|+..++.++....
T Consensus 332 l~~~~~~~~~~~~~~~~~~~--~~l-~~~~V~~i~~d~~g~----lWiGt------~----~~Gl~~~~~~~~~~~~~~~ 394 (795)
T 4a2l_A 332 LNYYHPIRNRFKNIRNIPYK--NSL-SDNVVSCIVEDKDKN----LWIGT------N----DGGLNLYNPITQRFTSYTL 394 (795)
T ss_dssp EEEECGGGGSSEEECCCTTS--SSC-SCSSEEEEEECTTSC----EEEEE------S----SSCEEEECTTTCCEEEECC
T ss_pred eEEeCCCcccceEEcCCCCC--CCC-CCCeeEEEEECCCCC----EEEEE------C----CCCeEEEcCCCCcEEEEec
Confidence 77777777766655433211 011 112234555554432 44544 1 1156677777777776521
Q ss_pred Cccccc-ee-ecccceEEE--CceEEEEEecCCCceEEEEEeCCCceeeEeCCCCCCCCCCccccccccceeeEe-cCeE
Q 039662 198 FEMRYD-YM-VDRIFNVYL--NGFCYWVVCRPDYSKAILSFSMSDEVFEEMEGPSVPQSTTYYQSVKTPWMLGTY-DDCL 272 (366)
Q Consensus 198 ~~~~~~-~~-~~~~~~v~~--~G~lywl~~~~~~~~~Il~fD~~~~~~~~i~~P~~~~~~~~~~~l~~~~~~~~~-~G~L 272 (366)
.+.... .. ...-.+++. +|.+.|++.. ...|..||..++++..+..............+ .+. +|.|
T Consensus 395 ~~~~~~~~l~~~~v~~i~~d~~g~~lWigt~---~~Gl~~~d~~~~~~~~~~~~~~~l~~~~v~~i------~~d~~g~l 465 (795)
T 4a2l_A 395 QEDESARGIGSNNIKAVYVDEKKSLVYIGTH---AGGLSILHRNSGQVENFNQRNSQLVNENVYAI------LPDGEGNL 465 (795)
T ss_dssp C------CCSCSCEEEEEEETTTTEEEEEET---TTEEEEEETTTCCEEEECTTTSCCSCSCEEEE------EECSSSCE
T ss_pred CCCCcccCCCCccEEEEEEcCCCCEEEEEeC---cCceeEEeCCCCcEEEeecCCCCcCCCeeEEE------EECCCCCE
Confidence 110000 00 011223333 5775777632 23599999999998877532111011111122 222 5677
Q ss_pred EEEEeCCCCCEEEEEEee--CCeeeEEEEec---C-CCcceeeEEEeeCCeEEEEEcCCeEEEEECCCCeE
Q 039662 273 SLLYSDSFAHTFELWTMT--GGNWTKHSTFG---P-FIETYQPIGFWRKGEFFLESSDKRVVLYDSTYQEM 337 (366)
Q Consensus 273 ~~~~~~~~~~~~~IW~l~--~~~W~~~~~i~---~-~~~~~~~~~~~~~g~i~~~~~~~~~~~yd~~~~~~ 337 (366)
.+... .. ++.++ ...|....... . ......-+....+|.+++... ..++.||++++++
T Consensus 466 wigt~----~G--l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~g~lWigt~-~Gl~~~~~~~~~~ 529 (795)
T 4a2l_A 466 WLGTL----SA--LVRFNPEQRSFTTIEKEKDGTPVVSKQITTLFRDSHKRLWIGGE-EGLSVFKQEGLDI 529 (795)
T ss_dssp EEEES----SC--EEEEETTTTEEEECCBCTTCCBCCCCCEEEEEECTTCCEEEEES-SCEEEEEEETTEE
T ss_pred EEEec----Cc--eeEEeCCCCeEEEccccccccccCCceEEEEEECCCCCEEEEeC-CceEEEeCCCCeE
Confidence 66653 12 44444 35554432220 0 011122333445677887765 7899999888776
No 68
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=66.63 E-value=67 Score=29.30 Aligned_cols=110 Identities=12% Similarity=0.068 Sum_probs=59.3
Q ss_pred CceEEEEEecCCCceEEEEEeCCCceeeEeCCCCCCCCCCccccccccceeeEecCe-EEEEEeCCCC-CEEEEEEeeCC
Q 039662 215 NGFCYWVVCRPDYSKAILSFSMSDEVFEEMEGPSVPQSTTYYQSVKTPWMLGTYDDC-LSLLYSDSFA-HTFELWTMTGG 292 (366)
Q Consensus 215 ~G~lywl~~~~~~~~~Il~fD~~~~~~~~i~~P~~~~~~~~~~~l~~~~~~~~~~G~-L~~~~~~~~~-~~~~IW~l~~~ 292 (366)
+|.+|+.. . + ..|..||+++.+...+-.+.. ....+ ....+|+ |+++...... ...-+|...+.
T Consensus 149 ~g~Lyv~d--~-~-~~I~~id~~~~~v~~~~~~~~-----~P~~i-----a~d~~G~~lyvad~~~~~~~~~v~~~~~~g 214 (430)
T 3tc9_A 149 HNHLYLVG--E-Q-HPTRLIDFEKEYVSTVYSGLS-----KVRTI-----CWTHEADSMIITNDQNNNDRPNNYILTRES 214 (430)
T ss_dssp EEEEEEEE--B-T-EEEEEEETTTTEEEEEECCCS-----CEEEE-----EECTTSSEEEEEECCSCTTSEEEEEEEGGG
T ss_pred CCeEEEEe--C-C-CcEEEEECCCCEEEEEecCCC-----CcceE-----EEeCCCCEEEEEeCCCCcccceEEEEeCCC
Confidence 48899885 2 2 689999999988766532111 11122 0223566 7766543222 33344444433
Q ss_pred eeeEEEEecCCCcceeeEEEee-CCeEEEEEc-CCeEEEEECCCCeEEE
Q 039662 293 NWTKHSTFGPFIETYQPIGFWR-KGEFFLESS-DKRVVLYDSTYQEMRD 339 (366)
Q Consensus 293 ~W~~~~~i~~~~~~~~~~~~~~-~g~i~~~~~-~~~~~~yd~~~~~~~~ 339 (366)
.|.....+... ....-+.+.. +|.+++... ..++..||++++....
T Consensus 215 ~~~~~~~l~~~-~~p~giavdp~~g~lyv~d~~~~~V~~~~~~~~~~~~ 262 (430)
T 3tc9_A 215 GFKVITELTKG-QNCNGAETHPINGELYFNSWNAGQVFRYDFTTQETTP 262 (430)
T ss_dssp TSCSEEEEEEC-SSCCCEEECTTTCCEEEEETTTTEEEEEETTTTEEEE
T ss_pred ceeeeeeeccC-CCceEEEEeCCCCEEEEEECCCCEEEEEECCCCcEEE
Confidence 33322222211 1123344555 677777754 6789999998887643
No 69
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=66.62 E-value=37 Score=29.39 Aligned_cols=69 Identities=7% Similarity=0.203 Sum_probs=45.9
Q ss_pred cCeEEEEEeCCCCCEEEEEEeeCCeeeEEEEecCCCcceeeEEEeeCCeEEEE-EcCCeEEEEECCCCeEEE
Q 039662 269 DDCLSLLYSDSFAHTFELWTMTGGNWTKHSTFGPFIETYQPIGFWRKGEFFLE-SSDKRVVLYDSTYQEMRD 339 (366)
Q Consensus 269 ~G~L~~~~~~~~~~~~~IW~l~~~~W~~~~~i~~~~~~~~~~~~~~~g~i~~~-~~~~~~~~yd~~~~~~~~ 339 (366)
+|++.++.. ....+.||-+++..|.....+........-+.+..++..++. ..++.+..||+++++...
T Consensus 19 ~~~~l~~~~--~d~~v~i~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~ 88 (372)
T 1k8k_C 19 DRTQIAICP--NNHEVHIYEKSGNKWVQVHELKEHNGQVTGVDWAPDSNRIVTCGTDRNAYVWTLKGRTWKP 88 (372)
T ss_dssp TSSEEEEEC--SSSEEEEEEEETTEEEEEEEEECCSSCEEEEEEETTTTEEEEEETTSCEEEEEEETTEEEE
T ss_pred CCCEEEEEe--CCCEEEEEeCCCCcEEeeeeecCCCCcccEEEEeCCCCEEEEEcCCCeEEEEECCCCeeee
Confidence 566555543 457899998886667777777643333344555667765554 457889999998887554
No 70
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=65.76 E-value=65 Score=27.71 Aligned_cols=69 Identities=17% Similarity=0.281 Sum_probs=39.8
Q ss_pred CeEEEEEeCCCCCEEEEEEee-C-CeeeEEEEecC--CCcceeeEEEeeCCeEEE-EEcCCeEEEEECC-CCeEEEEE
Q 039662 270 DCLSLLYSDSFAHTFELWTMT-G-GNWTKHSTFGP--FIETYQPIGFWRKGEFFL-ESSDKRVVLYDST-YQEMRDIR 341 (366)
Q Consensus 270 G~L~~~~~~~~~~~~~IW~l~-~-~~W~~~~~i~~--~~~~~~~~~~~~~g~i~~-~~~~~~~~~yd~~-~~~~~~i~ 341 (366)
|.+.+... ....+.||-+. + ..+... .+.. ......-+.+..+|..++ ...++.+..||++ .+.++.+.
T Consensus 221 ~~~l~s~~--~dg~i~iwd~~~~~~~~~~~-~~~~~~~~~~v~~~~~s~~g~~l~~~~~dg~i~iw~~~~~~~~~~~~ 295 (379)
T 3jrp_A 221 RSYLASVS--QDRTCIIWTQDNEQGPWKKT-LLKEEKFPDVLWRASWSLSGNVLALSGGDNKVTLWKENLEGKWEPAG 295 (379)
T ss_dssp SEEEEEEE--TTSCEEEEEESSTTSCCEEE-ESSSSCCSSCEEEEEECSSSCCEEEEESSSSEEEEEEEETTEEEEEE
T ss_pred CCeEEEEe--CCCEEEEEeCCCCCccceee-eeccccCCCcEEEEEEcCCCCEEEEecCCCcEEEEeCCCCCcccccc
Confidence 56555554 45689999988 4 333222 2221 112223345566776554 4568889999987 44555544
No 71
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=65.04 E-value=56 Score=26.74 Aligned_cols=190 Identities=9% Similarity=-0.009 Sum_probs=90.0
Q ss_pred eeecceEEE-ee-cCCeEEEEeCCCcceeecCCCCCCCCCcccccceeeEEeecCCCCCeEEEEEEeeecccCCCCCCcc
Q 039662 103 GPYDGIFCL-LK-SHTLINLWNVSLNEYRVIPECRPRLPLYTKTHYANVALGLDPVTKDFKLVLILTLWNDHRDSFHDFS 180 (366)
Q Consensus 103 ~s~~GLl~~-~~-~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~~~~ 180 (366)
.+.+|-+.+ .. ..+.+.++|+.++....++..... ...++.+|+..+ +.+.. . + -
T Consensus 31 ~~~~g~l~v~~~~~~~~i~~~~~~~~~~~~~~~~~~~---------~p~~i~~~~~g~----l~v~~----~-~-----~ 87 (270)
T 1rwi_B 31 VDSAGNVYVTSEGMYGRVVKLATGSTGTTVLPFNGLY---------QPQGLAVDGAGT----VYVTD----F-N-----N 87 (270)
T ss_dssp ECTTCCEEEEECSSSCEEEEECC-----EECCCCSCC---------SCCCEEECTTCC----EEEEE----T-T-----T
T ss_pred ECCCCCEEEEccCCCCcEEEecCCCcccceEeeCCcC---------CcceeEECCCCC----EEEEc----C-C-----C
Confidence 445666665 43 345689999988776665533221 124566776432 22222 1 1 1
Q ss_pred eEEEEEcCCCceeecCCCccccceeecccceEEE--CceEEEEEecCCCceEEEEEeCCCceeeEeCCCCCCCCCCcccc
Q 039662 181 HVAVYKFSTNSWRDLEGFEMRYDYMVDRIFNVYL--NGFCYWVVCRPDYSKAILSFSMSDEVFEEMEGPSVPQSTTYYQS 258 (366)
Q Consensus 181 ~~~vyss~~~~W~~~~~~~~~~~~~~~~~~~v~~--~G~lywl~~~~~~~~~Il~fD~~~~~~~~i~~P~~~~~~~~~~~ 258 (366)
.+.+|+..++.-+.... . .. ....++.+ +|.+|+... +...|..+|..+........ .... ....
T Consensus 88 ~i~~~d~~~~~~~~~~~-~-~~----~~p~~i~~~~~g~l~v~~~---~~~~i~~~~~~~~~~~~~~~-~~~~---~p~~ 154 (270)
T 1rwi_B 88 RVVTLAAGSNNQTVLPF-D-GL----NYPEGLAVDTQGAVYVADR---GNNRVVKLAAGSKTQTVLPF-TGLN---DPDG 154 (270)
T ss_dssp EEEEECTTCSCCEECCC-C-SC----SSEEEEEECTTCCEEEEEG---GGTEEEEECTTCCSCEECCC-CSCC---SCCC
T ss_pred EEEEEeCCCceEeeeec-C-Cc----CCCcceEECCCCCEEEEEC---CCCEEEEEECCCceeEeecc-ccCC---Ccee
Confidence 56677766654333311 0 00 01122333 677776542 23468888876654432211 1110 0112
Q ss_pred ccccceeeE-ecCeEEEEEeCCCCCEEEEEEeeC-CeeeEEEEecCCCcceeeEEEeeCCeEEEEEc-CCeEEEEECCCC
Q 039662 259 VKTPWMLGT-YDDCLSLLYSDSFAHTFELWTMTG-GNWTKHSTFGPFIETYQPIGFWRKGEFFLESS-DKRVVLYDSTYQ 335 (366)
Q Consensus 259 l~~~~~~~~-~~G~L~~~~~~~~~~~~~IW~l~~-~~W~~~~~i~~~~~~~~~~~~~~~g~i~~~~~-~~~~~~yd~~~~ 335 (366)
+ .. -+|+|++... ....+.+|-.++ .... ...... ....-+.+..+|.+++... ++.+..||++++
T Consensus 155 i------~~~~~g~l~v~~~--~~~~i~~~~~~~~~~~~--~~~~~~-~~p~~i~~d~~g~l~v~~~~~~~v~~~~~~~~ 223 (270)
T 1rwi_B 155 V------AVDNSGNVYVTDT--DNNRVVKLEAESNNQVV--LPFTDI-TAPWGIAVDEAGTVYVTEHNTNQVVKLLAGST 223 (270)
T ss_dssp E------EECTTCCEEEEEG--GGTEEEEECTTTCCEEE--CCCSSC-CSEEEEEECTTCCEEEEETTTSCEEEECTTCS
T ss_pred E------EEeCCCCEEEEEC--CCCEEEEEecCCCceEe--ecccCC-CCceEEEECCCCCEEEEECCCCcEEEEcCCCC
Confidence 2 33 2677776654 334555554443 2111 001111 1123345556677777764 678999999887
Q ss_pred eEEE
Q 039662 336 EMRD 339 (366)
Q Consensus 336 ~~~~ 339 (366)
....
T Consensus 224 ~~~~ 227 (270)
T 1rwi_B 224 TSTV 227 (270)
T ss_dssp CCEE
T ss_pred ccee
Confidence 6554
No 72
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=64.53 E-value=81 Score=28.35 Aligned_cols=55 Identities=9% Similarity=0.102 Sum_probs=31.4
Q ss_pred CCEEEEEEee-CCeeeEEEEec--CCCcceeeEEEeeCCeEEEEEcCCeEEEEECCCCeEE
Q 039662 281 AHTFELWTMT-GGNWTKHSTFG--PFIETYQPIGFWRKGEFFLESSDKRVVLYDSTYQEMR 338 (366)
Q Consensus 281 ~~~~~IW~l~-~~~W~~~~~i~--~~~~~~~~~~~~~~g~i~~~~~~~~~~~yd~~~~~~~ 338 (366)
...+.||-.. +. .+..+. ....+.....+..+|.++....++.+.+||+++++.+
T Consensus 377 ~~~i~iwd~~~g~---~~~~l~~~~~~~v~s~~~fspdg~~lasg~d~~i~iW~~~~gk~r 434 (435)
T 4e54_B 377 LRTIDVFDGNSGK---MMCQLYDPESSGISSLNEFNPMGDTLASAMGYHILIWSQQEARTR 434 (435)
T ss_dssp CCCEEEECSSSCC---EEEEECCSSCCCCCCEEEECTTSSCEEEECSSEEEECCCC-----
T ss_pred CCEEEEEECCCCc---EEEEEeCCCCCcEEEEEEECCCCCEEEEEcCCcEEEEECCcCeee
Confidence 3568888765 32 222222 2223334445667888877777889999999988754
No 73
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=63.74 E-value=70 Score=27.41 Aligned_cols=112 Identities=12% Similarity=0.125 Sum_probs=61.1
Q ss_pred CceEEEEEecCCCceEEEEEeCCCceeeEeCCCCCCCC-----C----------CccccccccceeeEe--cCeEEEEEe
Q 039662 215 NGFCYWVVCRPDYSKAILSFSMSDEVFEEMEGPSVPQS-----T----------TYYQSVKTPWMLGTY--DDCLSLLYS 277 (366)
Q Consensus 215 ~G~lywl~~~~~~~~~Il~fD~~~~~~~~i~~P~~~~~-----~----------~~~~~l~~~~~~~~~--~G~L~~~~~ 277 (366)
+|.++|... ....|..||..+.++..+..+..... + .....+ ... +|.|+++..
T Consensus 29 ~g~~l~v~~---~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~p~gi------~~~~~~g~l~v~d~ 99 (322)
T 2fp8_A 29 TNKGFYTSV---QDGRVIKYEGPNSGFVDFAYASPYWNKAFCENSTDAEKRPLCGRTYDI------SYNLQNNQLYIVDC 99 (322)
T ss_dssp TCSSEEEEC---TTSEEEEECCTTTCEEEEEESCTTCCHHHHTTCCCGGGHHHHCCEEEE------EEETTTTEEEEEET
T ss_pred CCCEEEEEc---CCCeEEEECCCCCceEEEecccccccccccccccchhccccCCCCceE------EEcCCCCcEEEEEC
Confidence 678888752 23579999999887776643322100 0 001122 443 578877754
Q ss_pred CCCCCEEEEEEee--CCeeeEEEEecCCC--cceeeEEEee-CCeEEEEEcC------------------CeEEEEECCC
Q 039662 278 DSFAHTFELWTMT--GGNWTKHSTFGPFI--ETYQPIGFWR-KGEFFLESSD------------------KRVVLYDSTY 334 (366)
Q Consensus 278 ~~~~~~~~IW~l~--~~~W~~~~~i~~~~--~~~~~~~~~~-~g~i~~~~~~------------------~~~~~yd~~~ 334 (366)
. .. |+.++ +............. ....-+.+.. +|.+++.... +.++.||+++
T Consensus 100 ~---~~--i~~~d~~~g~~~~~~~~~~~~~~~~p~~i~~d~~~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~ 174 (322)
T 2fp8_A 100 Y---YH--LSVVGSEGGHATQLATSVDGVPFKWLYAVTVDQRTGIVYFTDVSTLYDDRGVQQIMDTSDKTGRLIKYDPST 174 (322)
T ss_dssp T---TE--EEEECTTCEECEEEESEETTEECSCEEEEEECTTTCCEEEEESCSSCCTTCHHHHHHHTCCCEEEEEEETTT
T ss_pred C---CC--EEEEeCCCCEEEEecccCCCCcccccceEEEecCCCEEEEECCcccccccccceehcccCCCceEEEEeCCC
Confidence 2 22 45555 22222221111100 1223456667 7888887532 5799999998
Q ss_pred CeEEEE
Q 039662 335 QEMRDI 340 (366)
Q Consensus 335 ~~~~~i 340 (366)
++++.+
T Consensus 175 ~~~~~~ 180 (322)
T 2fp8_A 175 KETTLL 180 (322)
T ss_dssp TEEEEE
T ss_pred CEEEEe
Confidence 887654
No 74
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=63.32 E-value=86 Score=28.29 Aligned_cols=121 Identities=15% Similarity=0.082 Sum_probs=66.0
Q ss_pred CceEEEEEecCCCceEEEEEeCCCceeeEe---CC-CC-C--CCCCCccccccccceeeE--ecCeEEEEEeCC-----C
Q 039662 215 NGFCYWVVCRPDYSKAILSFSMSDEVFEEM---EG-PS-V--PQSTTYYQSVKTPWMLGT--YDDCLSLLYSDS-----F 280 (366)
Q Consensus 215 ~G~lywl~~~~~~~~~Il~fD~~~~~~~~i---~~-P~-~--~~~~~~~~~l~~~~~~~~--~~G~L~~~~~~~-----~ 280 (366)
+|.++|.+ .. ..+.++|+.++.-..+ .+ .. . ........+. +.. -+++|+++.... .
T Consensus 237 dG~~~~vs--~~--g~V~v~d~~~~~~~v~~~~~~~~~~~~~~g~~p~g~q~-----~a~~~~~~~lyV~~~~~~~~~hk 307 (386)
T 3sjl_D 237 AGRLVWPT--YT--GKIHQIDLSSGDAKFLPAVEALTEAERADGWRPGGWQQ-----VAYHRALDRIYLLVDQRDEWRHK 307 (386)
T ss_dssp TTEEEEEB--TT--SEEEEEECTTSSCEECCCEESSCHHHHHTTEEECSSSC-----EEEETTTTEEEEEEEECCTTCTT
T ss_pred CCcEEEEe--CC--CEEEEEECCCCcceeecceeccccccccccccCCCcce-----eeECCCCCeEEEEeccccccccC
Confidence 78889975 32 3699999987753322 10 00 0 0000000111 022 246688774311 2
Q ss_pred CCEEEEEEeeCCeeeEEEEecCCCcceeeEEEeeCCe-EEEE-Ec-CCeEEEEECCCCeE-EEEEEeCc
Q 039662 281 AHTFELWTMTGGNWTKHSTFGPFIETYQPIGFWRKGE-FFLE-SS-DKRVVLYDSTYQEM-RDIRITGL 345 (366)
Q Consensus 281 ~~~~~IW~l~~~~W~~~~~i~~~~~~~~~~~~~~~g~-i~~~-~~-~~~~~~yd~~~~~~-~~i~~~~~ 345 (366)
...=+||+++-..+..+.+|..... ..-+.+..+++ .++. .. ++.+..||..+++. +.+...+.
T Consensus 308 ~~~~~V~viD~~t~kv~~~i~vg~~-~~~lavs~D~~~~ly~tn~~~~~VsViD~~t~k~~~~i~~~~~ 375 (386)
T 3sjl_D 308 TASRFVVVLDAKTGERLAKFEMGHE-IDSINVSQDEKPLLYALSTGDKTLYIHDAESGEELRSVNQLGH 375 (386)
T ss_dssp SCEEEEEEEETTTCCEEEEEEEEEE-ECEEEECSSSSCEEEEEETTTTEEEEEETTTCCEEEEECCCCS
T ss_pred CCCCEEEEEECCCCeEEEEEECCCC-cceEEECCCCCeEEEEEcCCCCeEEEEECCCCcEEEEecCCCC
Confidence 2457899999544556666654221 22356677775 5555 33 78899999988765 44554443
No 75
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=63.21 E-value=46 Score=30.47 Aligned_cols=114 Identities=11% Similarity=0.158 Sum_probs=59.8
Q ss_pred cceEEEC-----ceEEEEEecCCCceEEEEEeCCCceeeEeCCCCCCCCCCccccccccceeeEecCeEEEEEeCCCCCE
Q 039662 209 IFNVYLN-----GFCYWVVCRPDYSKAILSFSMSDEVFEEMEGPSVPQSTTYYQSVKTPWMLGTYDDCLSLLYSDSFAHT 283 (366)
Q Consensus 209 ~~~v~~~-----G~lywl~~~~~~~~~Il~fD~~~~~~~~i~~P~~~~~~~~~~~l~~~~~~~~~~G~L~~~~~~~~~~~ 283 (366)
..++.++ |.+||.-. . ..|..+|+++++...+-.+.. ....+ ....+|.|+++........
T Consensus 141 P~gvavd~~s~~g~Lyv~D~---~-~~I~~id~~~g~v~~~~~~~~-----~P~gi-----avd~dG~lyVad~~~~~~~ 206 (433)
T 4hw6_A 141 IWRMMFDPNSNYDDLYWVGQ---R-DAFRHVDFVNQYVDIKTTNIG-----QCADV-----NFTLNGDMVVVDDQSSDTN 206 (433)
T ss_dssp CCEEEECTTTTTCEEEEECB---T-SCEEEEETTTTEEEEECCCCS-----CEEEE-----EECTTCCEEEEECCSCTTS
T ss_pred CceEEEccccCCCEEEEEeC---C-CCEEEEECCCCEEEEeecCCC-----CccEE-----EECCCCCEEEEcCCCCccc
Confidence 3456665 89999742 2 579999998888876633111 01122 1334677776654221222
Q ss_pred EEEEEee-CCeeeEEEEecCCCcceeeEEEee-CCeEEEEEc-CCeEEEEECCCCeE
Q 039662 284 FELWTMT-GGNWTKHSTFGPFIETYQPIGFWR-KGEFFLESS-DKRVVLYDSTYQEM 337 (366)
Q Consensus 284 ~~IW~l~-~~~W~~~~~i~~~~~~~~~~~~~~-~g~i~~~~~-~~~~~~yd~~~~~~ 337 (366)
-.+..+. +..|.....+... ....-+.+.. +|.+++... .+++..+|++++++
T Consensus 207 ~gv~~~~~~~~~~~~~~~~~~-~~P~giavd~~~G~lyv~d~~~~~V~~~d~~~g~~ 262 (433)
T 4hw6_A 207 TGIYLFTRASGFTERLSLCNA-RGAKTCAVHPQNGKIYYTRYHHAMISSYDPATGTL 262 (433)
T ss_dssp EEEEEECGGGTTCCEEEEEEC-SSBCCCEECTTTCCEEECBTTCSEEEEECTTTCCE
T ss_pred ceEEEEECCCCeecccccccc-CCCCEEEEeCCCCeEEEEECCCCEEEEEECCCCeE
Confidence 3333333 2222211112211 1112244555 577777654 56788899887766
No 76
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=63.08 E-value=77 Score=27.63 Aligned_cols=185 Identities=10% Similarity=0.029 Sum_probs=93.9
Q ss_pred eEEEee-cCCeEEEEeCCCcceeecCCCCCCCCCcccccceeeEEeecCCCCCeEEEEEEeeecccCCCCCCcceEEEEE
Q 039662 108 IFCLLK-SHTLINLWNVSLNEYRVIPECRPRLPLYTKTHYANVALGLDPVTKDFKLVLILTLWNDHRDSFHDFSHVAVYK 186 (366)
Q Consensus 108 Ll~~~~-~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~~vys 186 (366)
.+++.. .++.+.+||..+++....-.... ...++.++|..+ .++.... .+ -.+.+++
T Consensus 3 ~l~vs~~~d~~v~v~d~~~~~~~~~~~~~~----------~~~~~~~s~dg~--~l~~~~~-----~d-----~~i~v~d 60 (391)
T 1l0q_A 3 FAYIANSESDNISVIDVTSNKVTATIPVGS----------NPMGAVISPDGT--KVYVANA-----HS-----NDVSIID 60 (391)
T ss_dssp EEEEEETTTTEEEEEETTTTEEEEEEECSS----------SEEEEEECTTSS--EEEEEEG-----GG-----TEEEEEE
T ss_pred EEEEEcCCCCEEEEEECCCCeEEEEeecCC----------CcceEEECCCCC--EEEEECC-----CC-----CeEEEEE
Confidence 344444 34569999999987765322211 125566766533 2322221 02 2778899
Q ss_pred cCCCceeecCCCccccceeecccceEEE--CceEEEEEecCCCceEEEEEeCCCceeeE-eCCCCCCCCCCccccccccc
Q 039662 187 FSTNSWRDLEGFEMRYDYMVDRIFNVYL--NGFCYWVVCRPDYSKAILSFSMSDEVFEE-MEGPSVPQSTTYYQSVKTPW 263 (366)
Q Consensus 187 s~~~~W~~~~~~~~~~~~~~~~~~~v~~--~G~lywl~~~~~~~~~Il~fD~~~~~~~~-i~~P~~~~~~~~~~~l~~~~ 263 (366)
..++.-...- .... ...++.+ +|..-+.+. . ....|..+|+.+.+... +..... ...+
T Consensus 61 ~~~~~~~~~~--~~~~-----~v~~~~~spdg~~l~~~~-~-~~~~v~v~d~~~~~~~~~~~~~~~------~~~~---- 121 (391)
T 1l0q_A 61 TATNNVIATV--PAGS-----SPQGVAVSPDGKQVYVTN-M-ASSTLSVIDTTSNTVAGTVKTGKS------PLGL---- 121 (391)
T ss_dssp TTTTEEEEEE--ECSS-----SEEEEEECTTSSEEEEEE-T-TTTEEEEEETTTTEEEEEEECSSS------EEEE----
T ss_pred CCCCeEEEEE--ECCC-----CccceEECCCCCEEEEEE-C-CCCEEEEEECCCCeEEEEEeCCCC------cceE----
Confidence 8877543321 1111 1112222 455333332 1 23469999999876633 332211 1122
Q ss_pred eeeEecCe-EEEEEeCCCCCEEEEEEeeCCeeeEEEEecCCCcceeeEEEeeCCeEE-EEE-cCCeEEEEECCCCeEEE
Q 039662 264 MLGTYDDC-LSLLYSDSFAHTFELWTMTGGNWTKHSTFGPFIETYQPIGFWRKGEFF-LES-SDKRVVLYDSTYQEMRD 339 (366)
Q Consensus 264 ~~~~~~G~-L~~~~~~~~~~~~~IW~l~~~~W~~~~~i~~~~~~~~~~~~~~~g~i~-~~~-~~~~~~~yd~~~~~~~~ 339 (366)
...-+|+ |++... ....+.+|-+...+..... ..... ...+.+..+|..+ +.. .++.+..||+++++...
T Consensus 122 -~~s~dg~~l~~~~~--~~~~v~~~d~~~~~~~~~~--~~~~~-~~~~~~~~dg~~l~~~~~~~~~v~~~d~~~~~~~~ 194 (391)
T 1l0q_A 122 -ALSPDGKKLYVTNN--GDKTVSVINTVTKAVINTV--SVGRS-PKGIAVTPDGTKVYVANFDSMSISVIDTVTNSVID 194 (391)
T ss_dssp -EECTTSSEEEEEET--TTTEEEEEETTTTEEEEEE--ECCSS-EEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEE
T ss_pred -EECCCCCEEEEEeC--CCCEEEEEECCCCcEEEEE--ecCCC-cceEEECCCCCEEEEEeCCCCEEEEEECCCCeEEE
Confidence 0223565 434443 4578888876633333222 22112 2445556666544 443 36789999999987654
No 77
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=61.76 E-value=74 Score=26.96 Aligned_cols=185 Identities=10% Similarity=0.079 Sum_probs=88.4
Q ss_pred eEEEEeCCCcceeecCCCCCCCCCcccccceeeEEeecCCCCCeEEEEEEeeecccCCCCCCcce-EEEEEcCCCc-eee
Q 039662 117 LINLWNVSLNEYRVIPECRPRLPLYTKTHYANVALGLDPVTKDFKLVLILTLWNDHRDSFHDFSH-VAVYKFSTNS-WRD 194 (366)
Q Consensus 117 ~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~~~~~-~~vyss~~~~-W~~ 194 (366)
.+.++++.+++....-+... ...++.++|..+ + ++.... . .-. +.+|+...+. -..
T Consensus 109 ~i~v~d~~~~~~~~~~~~~~----------~~~~~~~spdg~-~-l~~~~~------~----~~~~i~~~~~~~~g~~~~ 166 (331)
T 3u4y_A 109 NMQSYSFLKNKFISTIPIPY----------DAVGIAISPNGN-G-LILIDR------S----SANTVRRFKIDADGVLFD 166 (331)
T ss_dssp EEEEEETTTTEEEEEEECCT----------TEEEEEECTTSS-C-EEEEEE------T----TTTEEEEEEECTTCCEEE
T ss_pred cEEEEECCCCCeEEEEECCC----------CccceEECCCCC-E-EEEEec------C----CCceEEEEEECCCCcEee
Confidence 69999999988765322111 125677777643 3 332222 1 013 6777765432 111
Q ss_pred cC--CCccccceeecccceEEECceEEEEEecCCCceEEEEEeCCCcee----eEeCCCCCCCCCCccccccccceeeEe
Q 039662 195 LE--GFEMRYDYMVDRIFNVYLNGFCYWVVCRPDYSKAILSFSMSDEVF----EEMEGPSVPQSTTYYQSVKTPWMLGTY 268 (366)
Q Consensus 195 ~~--~~~~~~~~~~~~~~~v~~~G~lywl~~~~~~~~~Il~fD~~~~~~----~~i~~P~~~~~~~~~~~l~~~~~~~~~ 268 (366)
.. ..+..... ..-.+.-+|...+.+. .....|..+|+++.+. ..++..... ..+ ...-
T Consensus 167 ~~~~~~~~~~~~---~~~~~spdg~~l~v~~--~~~~~v~v~d~~~~~~~~~~~~~~~~~~~------~~~-----~~sp 230 (331)
T 3u4y_A 167 TGQEFISGGTRP---FNITFTPDGNFAFVAN--LIGNSIGILETQNPENITLLNAVGTNNLP------GTI-----VVSR 230 (331)
T ss_dssp EEEEEECSSSSE---EEEEECTTSSEEEEEE--TTTTEEEEEECSSTTSCEEEEEEECSSCC------CCE-----EECT
T ss_pred cCCccccCCCCc---cceEECCCCCEEEEEe--CCCCeEEEEECCCCcccceeeeccCCCCC------ceE-----EECC
Confidence 10 00000000 0111222576334432 2234689999987664 233322111 111 1233
Q ss_pred cCe-EEEEEeCCCCCEEEEEEeeCCeeeEEEEecCC----Ccc---eeeEEEeeCCeEE-EEEc-CCeEEEEECCCCeEE
Q 039662 269 DDC-LSLLYSDSFAHTFELWTMTGGNWTKHSTFGPF----IET---YQPIGFWRKGEFF-LESS-DKRVVLYDSTYQEMR 338 (366)
Q Consensus 269 ~G~-L~~~~~~~~~~~~~IW~l~~~~W~~~~~i~~~----~~~---~~~~~~~~~g~i~-~~~~-~~~~~~yd~~~~~~~ 338 (366)
+|+ |++... ....+.+|-++..+...+..+... ... ...+.+..+|+.+ +... ++.+.+||++++...
T Consensus 231 dg~~l~v~~~--~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~d~~~~~~~ 308 (331)
T 3u4y_A 231 DGSTVYVLTE--STVDVFNFNQLSGTLSFVKSFGHGLLIDPRPLFGANQMALNKTETKLFISANISRELKVFTISGKVVG 308 (331)
T ss_dssp TSSEEEEECS--SEEEEEEEETTTTEEEEEEEEECCCCCCCGGGTTCCCEEECTTSSEEEEEETTTTEEEEEETTSCEEE
T ss_pred CCCEEEEEEc--CCCEEEEEECCCCceeeecccccccccCCCCcccccceEECCCCCEEEEecCCCCcEEEEEecCCccc
Confidence 677 444332 344566655543333333333311 111 1235677787754 4443 568999999998877
Q ss_pred EEE
Q 039662 339 DIR 341 (366)
Q Consensus 339 ~i~ 341 (366)
.+.
T Consensus 309 ~~~ 311 (331)
T 3u4y_A 309 YVA 311 (331)
T ss_dssp ECT
T ss_pred cee
Confidence 653
No 78
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=60.84 E-value=77 Score=26.87 Aligned_cols=104 Identities=13% Similarity=0.067 Sum_probs=54.2
Q ss_pred ceEEEEEeCCCceeeEeCCCCCCCCCCccccccccceeeEecCe-EEEEEeCC---CCCEEEEEEeeCCeeeEEEEe-cC
Q 039662 228 SKAILSFSMSDEVFEEMEGPSVPQSTTYYQSVKTPWMLGTYDDC-LSLLYSDS---FAHTFELWTMTGGNWTKHSTF-GP 302 (366)
Q Consensus 228 ~~~Il~fD~~~~~~~~i~~P~~~~~~~~~~~l~~~~~~~~~~G~-L~~~~~~~---~~~~~~IW~l~~~~W~~~~~i-~~ 302 (366)
...|..+|.+++++..+. .... ...+ ...-+|+ |+++.... ....+.+|-+++........+ ..
T Consensus 168 ~~~v~~~d~~~g~~~~~~-~~~~-----p~gl-----~~spdg~~lyv~~~~~~~~~~~~i~~~~~~~~~l~~~~~~~~~ 236 (305)
T 3dr2_A 168 HHSVYRLPPDGSPLQRMA-DLDH-----PNGL-----AFSPDEQTLYVSQTPEQGHGSVEITAFAWRDGALHDRRHFASV 236 (305)
T ss_dssp CEEEEEECSSSCCCEEEE-EESS-----EEEE-----EECTTSSEEEEEECCC---CCCEEEEEEEETTEEEEEEEEECC
T ss_pred CCeEEEEcCCCCcEEEEe-cCCC-----Ccce-----EEcCCCCEEEEEecCCcCCCCCEEEEEEecCCCccCCeEEEEC
Confidence 357999999888776653 1110 1112 0223565 55554311 013444444443322222221 11
Q ss_pred CCcceeeEEEeeCCeEEEEEcCCeEEEEECCCCeEEEEEEe
Q 039662 303 FIETYQPIGFWRKGEFFLESSDKRVVLYDSTYQEMRDIRIT 343 (366)
Q Consensus 303 ~~~~~~~~~~~~~g~i~~~~~~~~~~~yd~~~~~~~~i~~~ 343 (366)
......-+.+..+|.+++.. ...+..||++.+.+..+...
T Consensus 237 ~~~~pdgi~~d~~G~lwv~~-~~gv~~~~~~g~~~~~~~~~ 276 (305)
T 3dr2_A 237 PDGLPDGFCVDRGGWLWSSS-GTGVCVFDSDGQLLGHIPTP 276 (305)
T ss_dssp SSSCCCSEEECTTSCEEECC-SSEEEEECTTSCEEEEEECS
T ss_pred CCCCCCeEEECCCCCEEEec-CCcEEEECCCCCEEEEEECC
Confidence 11222335556678876665 56799999988888877654
No 79
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=60.83 E-value=22 Score=31.13 Aligned_cols=138 Identities=9% Similarity=0.108 Sum_probs=63.8
Q ss_pred eEEEEEcCCCceeecCCCccccceeecccceEEE--CceEEEEEecCCCceEEEEEeCCCce-eeEe-CCCCCCCCCCcc
Q 039662 181 HVAVYKFSTNSWRDLEGFEMRYDYMVDRIFNVYL--NGFCYWVVCRPDYSKAILSFSMSDEV-FEEM-EGPSVPQSTTYY 256 (366)
Q Consensus 181 ~~~vyss~~~~W~~~~~~~~~~~~~~~~~~~v~~--~G~lywl~~~~~~~~~Il~fD~~~~~-~~~i-~~P~~~~~~~~~ 256 (366)
.+.+|+..++.|+.+..+...... -.++.+ +|.+-..+. .+ ..|..+|+.+++ +... .+.... ...
T Consensus 34 ~i~iw~~~~~~~~~~~~~~~h~~~----v~~~~~s~~~~~l~s~s-~d--~~v~vwd~~~~~~~~~~~~~~~~~---~~v 103 (377)
T 3dwl_C 34 QVELYEQDGNGWKHARTFSDHDKI----VTCVDWAPKSNRIVTCS-QD--RNAYVYEKRPDGTWKQTLVLLRLN---RAA 103 (377)
T ss_dssp CBCEEEEETTEEEECCCBCCCSSC----EEEEEECTTTCCEEEEE-TT--SSEEEC------CCCCEEECCCCS---SCE
T ss_pred EEEEEEccCCceEEEEEEecCCce----EEEEEEeCCCCEEEEEe-CC--CeEEEEEcCCCCceeeeeEecccC---Cce
Confidence 567888888888776432211111 112222 343322221 22 358888888776 3221 111111 111
Q ss_pred ccccccceeeEecCeEEEEEeCCCCCEEEEEEee-CCeeeEEEEecC-CCcceeeEEEeeCCeEEEE-EcCCeEEEEECC
Q 039662 257 QSVKTPWMLGTYDDCLSLLYSDSFAHTFELWTMT-GGNWTKHSTFGP-FIETYQPIGFWRKGEFFLE-SSDKRVVLYDST 333 (366)
Q Consensus 257 ~~l~~~~~~~~~~G~L~~~~~~~~~~~~~IW~l~-~~~W~~~~~i~~-~~~~~~~~~~~~~g~i~~~-~~~~~~~~yd~~ 333 (366)
..+ ...-+|++.+... ....+.||-++ +..|.....+.. ......-+.+..++..++. ..++.+..||++
T Consensus 104 ~~~-----~~~~~~~~l~~~~--~d~~i~iwd~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~ 176 (377)
T 3dwl_C 104 TFV-----RWSPNEDKFAVGS--GARVISVCYFEQENDWWVSKHLKRPLRSTILSLDWHPNNVLLAAGCADRKAYVLSAY 176 (377)
T ss_dssp EEE-----ECCTTSSCCEEEE--SSSCEEECCC-----CCCCEEECSSCCSCEEEEEECTTSSEEEEEESSSCEEEEEEC
T ss_pred EEE-----EECCCCCEEEEEe--cCCeEEEEEECCcccceeeeEeecccCCCeEEEEEcCCCCEEEEEeCCCEEEEEEEE
Confidence 111 0112555444444 35689999888 566766666653 2333344555666765544 457889999986
Q ss_pred CC
Q 039662 334 YQ 335 (366)
Q Consensus 334 ~~ 335 (366)
++
T Consensus 177 ~~ 178 (377)
T 3dwl_C 177 VR 178 (377)
T ss_dssp CS
T ss_pred ec
Confidence 43
No 80
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=60.71 E-value=82 Score=27.14 Aligned_cols=104 Identities=9% Similarity=0.125 Sum_probs=58.3
Q ss_pred CceEEEEEecCCCceEEEEEeCCCceeeEeCCCCCCCCCCccccccccceeeEecCeEEEEEeCCCCCEEEEEEee--CC
Q 039662 215 NGFCYWVVCRPDYSKAILSFSMSDEVFEEMEGPSVPQSTTYYQSVKTPWMLGTYDDCLSLLYSDSFAHTFELWTMT--GG 292 (366)
Q Consensus 215 ~G~lywl~~~~~~~~~Il~fD~~~~~~~~i~~P~~~~~~~~~~~l~~~~~~~~~~G~L~~~~~~~~~~~~~IW~l~--~~ 292 (366)
+|.+||.... ...|..+|.++++...+..|... ..+ ...-+|++.+... .. |+.++ ++
T Consensus 60 ~~~l~~~d~~---~~~i~~~d~~~~~~~~~~~~~~v------~~i-----~~~~dg~l~v~~~----~g--l~~~d~~~g 119 (326)
T 2ghs_A 60 SGTAWWFNIL---ERELHELHLASGRKTVHALPFMG------SAL-----AKISDSKQLIASD----DG--LFLRDTATG 119 (326)
T ss_dssp TTEEEEEEGG---GTEEEEEETTTTEEEEEECSSCE------EEE-----EEEETTEEEEEET----TE--EEEEETTTC
T ss_pred CCEEEEEECC---CCEEEEEECCCCcEEEEECCCcc------eEE-----EEeCCCeEEEEEC----CC--EEEEECCCC
Confidence 3789998632 34799999999887766655321 122 1344788766552 22 56665 34
Q ss_pred eeeEEEEecCCC--cceeeEEEeeCCeEEEEEc-------CCeEEEEECCCCeEEEE
Q 039662 293 NWTKHSTFGPFI--ETYQPIGFWRKGEFFLESS-------DKRVVLYDSTYQEMRDI 340 (366)
Q Consensus 293 ~W~~~~~i~~~~--~~~~~~~~~~~g~i~~~~~-------~~~~~~yd~~~~~~~~i 340 (366)
+........... .....+.+..+|.+++... ...++.+| +++++.+
T Consensus 120 ~~~~~~~~~~~~~~~~~~~i~~d~~G~l~v~~~~~~~~~~~~~l~~~~--~g~~~~~ 174 (326)
T 2ghs_A 120 VLTLHAELESDLPGNRSNDGRMHPSGALWIGTMGRKAETGAGSIYHVA--KGKVTKL 174 (326)
T ss_dssp CEEEEECSSTTCTTEEEEEEEECTTSCEEEEEEETTCCTTCEEEEEEE--TTEEEEE
T ss_pred cEEEEeeCCCCCCCCCCCCEEECCCCCEEEEeCCCcCCCCceEEEEEe--CCcEEEe
Confidence 444332221111 1123345566777776643 25788888 5666554
No 81
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=60.63 E-value=83 Score=27.19 Aligned_cols=193 Identities=12% Similarity=0.034 Sum_probs=92.1
Q ss_pred EEEEeCCCcceeecCCCCCCCCCcccccceeeEEeecCCCCCeEEEEEEeeecccCCCCCCcceEEEEEcC--CCceeec
Q 039662 118 INLWNVSLNEYRVIPECRPRLPLYTKTHYANVALGLDPVTKDFKLVLILTLWNDHRDSFHDFSHVAVYKFS--TNSWRDL 195 (366)
Q Consensus 118 ~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~~vyss~--~~~W~~~ 195 (366)
++.+|+.|++...+....... ...+.++|..+ .++.... + ....-.+.+|+.. ++..+.+
T Consensus 31 ~~~~d~~~g~~~~~~~~~~~~---------p~~l~~spdg~--~l~~~~~------~-~~~~~~v~~~~~~~~~g~~~~~ 92 (361)
T 3scy_A 31 TFRFNEETGESLPLSDAEVAN---------PSYLIPSADGK--FVYSVNE------F-SKDQAAVSAFAFDKEKGTLHLL 92 (361)
T ss_dssp EEEEETTTCCEEEEEEEECSC---------CCSEEECTTSS--EEEEEEC------C-SSTTCEEEEEEEETTTTEEEEE
T ss_pred EEEEeCCCCCEEEeecccCCC---------CceEEECCCCC--EEEEEEc------c-CCCCCcEEEEEEeCCCCcEEEe
Confidence 555688998877665432111 13456666532 2333322 1 0112356667654 4666655
Q ss_pred CCCccccceeecccceEEECceEEEEEecCCCceEEEEEeCCCc-eeeEe----CCCCCCC-----CCCcccccccccee
Q 039662 196 EGFEMRYDYMVDRIFNVYLNGFCYWVVCRPDYSKAILSFSMSDE-VFEEM----EGPSVPQ-----STTYYQSVKTPWML 265 (366)
Q Consensus 196 ~~~~~~~~~~~~~~~~v~~~G~lywl~~~~~~~~~Il~fD~~~~-~~~~i----~~P~~~~-----~~~~~~~l~~~~~~ 265 (366)
...+.... ....+..+|...+.+.. ....|..+|+.+. ....+ ....... .......+ .
T Consensus 93 ~~~~~~~~----~p~~~~~dg~~l~~~~~--~~~~v~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~-----~ 161 (361)
T 3scy_A 93 NTQKTMGA----DPCYLTTNGKNIVTANY--SGGSITVFPIGQDGALLPASDVIEFKGSGPDKERQTMPHLHCV-----R 161 (361)
T ss_dssp EEEECSSS----CEEEEEECSSEEEEEET--TTTEEEEEEBCTTSCBCSCSEEEECCCCCSCTTTCSSCCEEEE-----E
T ss_pred eEeccCCC----CcEEEEECCCEEEEEEC--CCCEEEEEEeCCCCcCcccceeEEccCCCCCccccCCCcceEE-----E
Confidence 31111100 11222237775445422 2346888888643 22111 1111000 00000111 1
Q ss_pred eEecCe-EEEEEeCCCCCEEEEEEee-CC-----e-eeEE---EEecCC-CcceeeEEEeeCCeE-EEEE-cCCeEEEEE
Q 039662 266 GTYDDC-LSLLYSDSFAHTFELWTMT-GG-----N-WTKH---STFGPF-IETYQPIGFWRKGEF-FLES-SDKRVVLYD 331 (366)
Q Consensus 266 ~~~~G~-L~~~~~~~~~~~~~IW~l~-~~-----~-W~~~---~~i~~~-~~~~~~~~~~~~g~i-~~~~-~~~~~~~yd 331 (366)
..-+|+ |++... ....+.+|.++ +. + .... ..+... ....+-+.+..+|+. ++.. .++.+..||
T Consensus 162 ~spdg~~l~~~~~--~~~~v~v~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~~ 239 (361)
T 3scy_A 162 ITPDGKYLLADDL--GTDQIHKFNINPNANADNKEKFLTKGTPEAFKVAPGSGPRHLIFNSDGKFAYLINEIGGTVIAFR 239 (361)
T ss_dssp ECTTSSEEEEEET--TTTEEEEEEECTTCCTTTCCCCEEEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTCEEEEEE
T ss_pred ECCCCCEEEEEeC--CCCEEEEEEEcCCCCcccccceeecccccceecCCCCCCeEEEEcCCCCEEEEEcCCCCeEEEEE
Confidence 333676 544443 56789999888 22 2 3222 122211 122344667778874 4444 378899999
Q ss_pred CCCCeEEEEE
Q 039662 332 STYQEMRDIR 341 (366)
Q Consensus 332 ~~~~~~~~i~ 341 (366)
+++++++.+.
T Consensus 240 ~~~g~~~~~~ 249 (361)
T 3scy_A 240 YADGMLDEIQ 249 (361)
T ss_dssp EETTEEEEEE
T ss_pred ecCCceEEeE
Confidence 9988876654
No 82
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=60.51 E-value=79 Score=26.90 Aligned_cols=105 Identities=11% Similarity=0.013 Sum_probs=57.6
Q ss_pred CceEEEEEecCCCceEEEEEeCCCceeeEeCCCCCCCCCCccccccccceeeEecCeEEEEEeCCCCCEEEEEEee--CC
Q 039662 215 NGFCYWVVCRPDYSKAILSFSMSDEVFEEMEGPSVPQSTTYYQSVKTPWMLGTYDDCLSLLYSDSFAHTFELWTMT--GG 292 (366)
Q Consensus 215 ~G~lywl~~~~~~~~~Il~fD~~~~~~~~i~~P~~~~~~~~~~~l~~~~~~~~~~G~L~~~~~~~~~~~~~IW~l~--~~ 292 (366)
+|.+||.. .....|..+|.+.+.-..+..+.. ...+ ...-+|+|+++... .....|+.++ +.
T Consensus 42 ~g~lyv~d---~~~~~I~~~d~~g~~~~~~~~~~~------p~gi-----a~~~dG~l~vad~~--~~~~~v~~~d~~~g 105 (306)
T 2p4o_A 42 DGTIFVTN---HEVGEIVSITPDGNQQIHATVEGK------VSGL-----AFTSNGDLVATGWN--ADSIPVVSLVKSDG 105 (306)
T ss_dssp TSCEEEEE---TTTTEEEEECTTCCEEEEEECSSE------EEEE-----EECTTSCEEEEEEC--TTSCEEEEEECTTS
T ss_pred CCCEEEEe---CCCCeEEEECCCCceEEEEeCCCC------ceeE-----EEcCCCcEEEEecc--CCcceEEEEcCCCC
Confidence 78899985 224579999998764444444421 1122 12236888776542 2234566665 34
Q ss_pred eeeEEEEecCCCcceeeEEEeeCCeEEEEEc-CCeEEEEECCCCe
Q 039662 293 NWTKHSTFGPFIETYQPIGFWRKGEFFLESS-DKRVVLYDSTYQE 336 (366)
Q Consensus 293 ~W~~~~~i~~~~~~~~~~~~~~~g~i~~~~~-~~~~~~yd~~~~~ 336 (366)
+......+... ....-++.+.++.+++... .+.++.+|+.+++
T Consensus 106 ~~~~~~~~~~~-~~~~g~~~~~~~~~~v~d~~~g~i~~~d~~~~~ 149 (306)
T 2p4o_A 106 TVETLLTLPDA-IFLNGITPLSDTQYLTADSYRGAIWLIDVVQPS 149 (306)
T ss_dssp CEEEEEECTTC-SCEEEEEESSSSEEEEEETTTTEEEEEETTTTE
T ss_pred eEEEEEeCCCc-cccCcccccCCCcEEEEECCCCeEEEEeCCCCc
Confidence 44444443221 1112223355566666653 6789999987653
No 83
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=60.11 E-value=97 Score=27.80 Aligned_cols=184 Identities=11% Similarity=0.077 Sum_probs=93.4
Q ss_pred CeEEEEeCCCcceeecCCCCCCCCCcccccceeeEEeecCCCCCeEEEEEEeeecccCCCCCCcceEEEEEcCCCceeec
Q 039662 116 TLINLWNVSLNEYRVIPECRPRLPLYTKTHYANVALGLDPVTKDFKLVLILTLWNDHRDSFHDFSHVAVYKFSTNSWRDL 195 (366)
Q Consensus 116 ~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~~vyss~~~~W~~~ 195 (366)
..+.++|..++..+.+..... ....+.+.|..+ +++.... + .....+.+++..++.-+.+
T Consensus 159 ~~i~i~d~~g~~~~~l~~~~~----------~v~~~~~Spdg~--~la~~s~------~--~~~~~i~~~d~~tg~~~~l 218 (415)
T 2hqs_A 159 YELRVSDYDGYNQFVVHRSPQ----------PLMSPAWSPDGS--KLAYVTF------E--SGRSALVIQTLANGAVRQV 218 (415)
T ss_dssp EEEEEEETTSCSCEEEEEESS----------CEEEEEECTTSS--EEEEEEC------T--TSSCEEEEEETTTCCEEEE
T ss_pred ceEEEEcCCCCCCEEEeCCCC----------cceeeEEcCCCC--EEEEEEe------c--CCCcEEEEEECCCCcEEEe
Confidence 469999998766665543221 224566666543 3333322 1 1234788999988876655
Q ss_pred CCCccccceeecccceEEECce-EEEEEecCCCceEEEEEeCCCceeeEeCCCCCCCCCCccccccccceeeEecCe-EE
Q 039662 196 EGFEMRYDYMVDRIFNVYLNGF-CYWVVCRPDYSKAILSFSMSDEVFEEMEGPSVPQSTTYYQSVKTPWMLGTYDDC-LS 273 (366)
Q Consensus 196 ~~~~~~~~~~~~~~~~v~~~G~-lywl~~~~~~~~~Il~fD~~~~~~~~i~~P~~~~~~~~~~~l~~~~~~~~~~G~-L~ 273 (366)
...+.... .....-+|. +++... .++...|..+|+.+.+...+..... ....+ ...-+|+ |+
T Consensus 219 ~~~~~~~~-----~~~~spdg~~la~~~~-~~g~~~i~~~d~~~~~~~~l~~~~~-----~~~~~-----~~spdg~~l~ 282 (415)
T 2hqs_A 219 ASFPRHNG-----APAFSPDGSKLAFALS-KTGSLNLYVMDLASGQIRQVTDGRS-----NNTEP-----TWFPDSQNLA 282 (415)
T ss_dssp ECCSSCEE-----EEEECTTSSEEEEEEC-TTSSCEEEEEETTTCCEEECCCCSS-----CEEEE-----EECTTSSEEE
T ss_pred ecCCCccc-----CEEEcCCCCEEEEEEe-cCCCceEEEEECCCCCEEeCcCCCC-----cccce-----EECCCCCEEE
Confidence 31111000 111112565 554442 2345579999999887654422111 01111 0223666 44
Q ss_pred EEEeCCCCCEEEEEEee--CCeeeEEEEecCCCcceeeEEEeeCCeEE-EEEc---CCeEEEEECCCCeEEEE
Q 039662 274 LLYSDSFAHTFELWTMT--GGNWTKHSTFGPFIETYQPIGFWRKGEFF-LESS---DKRVVLYDSTYQEMRDI 340 (366)
Q Consensus 274 ~~~~~~~~~~~~IW~l~--~~~W~~~~~i~~~~~~~~~~~~~~~g~i~-~~~~---~~~~~~yd~~~~~~~~i 340 (366)
+... ......||.++ +.. ..++........-+.+..+|+.+ +... ...+..+|+++++.+.+
T Consensus 283 ~~s~--~~g~~~i~~~d~~~~~---~~~l~~~~~~~~~~~~spdG~~l~~~~~~~g~~~i~~~d~~~~~~~~l 350 (415)
T 2hqs_A 283 FTSD--QAGRPQVYKVNINGGA---PQRITWEGSQNQDADVSSDGKFMVMVSSNGGQQHIAKQDLATGGVQVL 350 (415)
T ss_dssp EEEC--TTSSCEEEEEETTSSC---CEECCCSSSEEEEEEECTTSSEEEEEEECSSCEEEEEEETTTCCEEEC
T ss_pred EEEC--CCCCcEEEEEECCCCC---EEEEecCCCcccCeEECCCCCEEEEEECcCCceEEEEEECCCCCEEEe
Confidence 4443 23445677777 322 12222211222234455677644 4433 25799999999887654
No 84
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=59.49 E-value=78 Score=26.53 Aligned_cols=203 Identities=8% Similarity=0.052 Sum_probs=98.2
Q ss_pred ecceEEEe--------ecCCeEEEEeCCCcceeecCCCCCCCCCcccccceeeEEeecCCCCCeEEEEEEeeecccCCCC
Q 039662 105 YDGIFCLL--------KSHTLINLWNVSLNEYRVIPECRPRLPLYTKTHYANVALGLDPVTKDFKLVLILTLWNDHRDSF 176 (366)
Q Consensus 105 ~~GLl~~~--------~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~ 176 (366)
.+|-+.+. ...+.+.++||.+++...+..+... + ......++.+|+..+ ++. +.. . .
T Consensus 27 ~~g~l~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~---~--~~~~~~~i~~~~~~g--~l~-v~~----~-~-- 91 (314)
T 1pjx_A 27 KNGDFYIVAPEVEVNGKPAGEILRIDLKTGKKTVICKPEVN---G--YGGIPAGCQCDRDAN--QLF-VAD----M-R-- 91 (314)
T ss_dssp TTSCEEEEETTCEETTEECCEEEEECTTTCCEEEEECCEET---T--EECCEEEEEECSSSS--EEE-EEE----T-T--
T ss_pred CCCCEEEEEeccccCCCCCCEEEEEeCCCCcEEEEEecccC---C--CCCCCceEEEecCCC--cEE-EEE----C-C--
Confidence 45655554 3345699999999988766431110 0 011235677776522 222 222 0 1
Q ss_pred CCcceEEEEEcCCCceeec-CCCccccceeecccceEEE--CceEEEEEecCC------------CceEEEEEeCCCcee
Q 039662 177 HDFSHVAVYKFSTNSWRDL-EGFEMRYDYMVDRIFNVYL--NGFCYWVVCRPD------------YSKAILSFSMSDEVF 241 (366)
Q Consensus 177 ~~~~~~~vyss~~~~W~~~-~~~~~~~~~~~~~~~~v~~--~G~lywl~~~~~------------~~~~Il~fD~~~~~~ 241 (366)
-.+.+|+.. +..+.. ........ ......+.+ +|.+|+...... ....|..+|.+ +++
T Consensus 92 ---~~l~~~d~~-g~~~~~~~~~~~~~~--~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-g~~ 164 (314)
T 1pjx_A 92 ---LGLLVVQTD-GTFEEIAKKDSEGRR--MQGCNDCAFDYEGNLWITAPAGEVAPADYTRSMQEKFGSIYCFTTD-GQM 164 (314)
T ss_dssp ---TEEEEEETT-SCEEECCSBCTTSCB--CBCCCEEEECTTSCEEEEECBCBCTTSCCCBTTSSSCEEEEEECTT-SCE
T ss_pred ---CCEEEEeCC-CCEEEEEeccCCCcc--ccCCcCEEECCCCCEEEEecCcccccccccccccCCCCeEEEECCC-CCE
Confidence 156778877 665544 21110000 011223333 577766542110 02579999987 555
Q ss_pred eEeCCCCCCCCCCccccccccceeeE----ecCe-EEEEEeCCCCCEEEEEEee-CCeeeEEEEecCCC----cceeeEE
Q 039662 242 EEMEGPSVPQSTTYYQSVKTPWMLGT----YDDC-LSLLYSDSFAHTFELWTMT-GGNWTKHSTFGPFI----ETYQPIG 311 (366)
Q Consensus 242 ~~i~~P~~~~~~~~~~~l~~~~~~~~----~~G~-L~~~~~~~~~~~~~IW~l~-~~~W~~~~~i~~~~----~~~~~~~ 311 (366)
..+.-... . ...+ ... -+|+ |++... ....+.+|-++ .........+.... ....-+.
T Consensus 165 ~~~~~~~~--~---~~~i-----~~~~~~d~dg~~l~v~~~--~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~i~ 232 (314)
T 1pjx_A 165 IQVDTAFQ--F---PNGI-----AVRHMNDGRPYQLIVAET--PTKKLWSYDIKGPAKIENKKVWGHIPGTHEGGADGMD 232 (314)
T ss_dssp EEEEEEES--S---EEEE-----EEEECTTSCEEEEEEEET--TTTEEEEEEEEETTEEEEEEEEEECCCCSSCEEEEEE
T ss_pred EEeccCCC--C---cceE-----EEecccCCCCCEEEEEEC--CCCeEEEEECCCCCccccceEEEECCCCCCCCCCceE
Confidence 43310000 0 0111 022 3453 554443 34677777665 34433322221111 2223345
Q ss_pred EeeCCeEEEEE-cCCeEEEEECCCCe-EEEEE
Q 039662 312 FWRKGEFFLES-SDKRVVLYDSTYQE-MRDIR 341 (366)
Q Consensus 312 ~~~~g~i~~~~-~~~~~~~yd~~~~~-~~~i~ 341 (366)
+..+|.+++.. .++.+..||+++++ ...+.
T Consensus 233 ~d~~G~l~v~~~~~~~i~~~d~~~g~~~~~~~ 264 (314)
T 1pjx_A 233 FDEDNNLLVANWGSSHIEVFGPDGGQPKMRIR 264 (314)
T ss_dssp EBTTCCEEEEEETTTEEEEECTTCBSCSEEEE
T ss_pred ECCCCCEEEEEcCCCEEEEEcCCCCcEeEEEe
Confidence 56678888775 46789999998543 44444
No 85
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=59.47 E-value=74 Score=31.10 Aligned_cols=113 Identities=13% Similarity=0.151 Sum_probs=61.9
Q ss_pred cceEEECceEEEEEecCCCceEEEEEeCCCce--eeEeCCCCCCC------CCCccccccccceeeEecCeEEEEEeCCC
Q 039662 209 IFNVYLNGFCYWVVCRPDYSKAILSFSMSDEV--FEEMEGPSVPQ------STTYYQSVKTPWMLGTYDDCLSLLYSDSF 280 (366)
Q Consensus 209 ~~~v~~~G~lywl~~~~~~~~~Il~fD~~~~~--~~~i~~P~~~~------~~~~~~~l~~~~~~~~~~G~L~~~~~~~~ 280 (366)
..++..+|.+|.... ...|.++|.++++ |+. +.+.... .......+ ...+|+|++...+
T Consensus 71 ~~P~v~~g~vyv~~~----~~~v~AlD~~tG~~~W~~-~~~~~~~~~~~~~~~~~~~~~------a~~~~~v~v~~~d-- 137 (677)
T 1kb0_A 71 ATPVVVDGIMYVSAS----WSVVHAIDTRTGNRIWTY-DPQIDRSTGFKGCCDVVNRGV------ALWKGKVYVGAWD-- 137 (677)
T ss_dssp CCCEEETTEEEEECG----GGCEEEEETTTTEEEEEE-CCCCCGGGGGGSSSCSCCCCC------EEETTEEEEECTT--
T ss_pred eCCEEECCEEEEECC----CCeEEEEECCCCcEEEEE-cCCCCccccccccccCCCCCc------eEECCEEEEEcCC--
Confidence 456788999998752 2469999998765 432 3322110 00011233 5567777665431
Q ss_pred CCEEEEEEee---C-CeeeEEEEecCC--Ccc-eeeEEEeeCCeEEEEEc------CCeEEEEECCCCeEEE
Q 039662 281 AHTFELWTMT---G-GNWTKHSTFGPF--IET-YQPIGFWRKGEFFLESS------DKRVVLYDSTYQEMRD 339 (366)
Q Consensus 281 ~~~~~IW~l~---~-~~W~~~~~i~~~--~~~-~~~~~~~~~g~i~~~~~------~~~~~~yd~~~~~~~~ 339 (366)
.. |..++ | ..|......+.. ..+ ..|+. .++.+++... ++.++.||.+|++..+
T Consensus 138 -g~--l~alD~~tG~~~W~~~~~~~~~~~~~~~~~p~v--~~~~v~v~~~~~~~~~~g~v~a~D~~tG~~~W 204 (677)
T 1kb0_A 138 -GR--LIALDAATGKEVWHQNTFEGQKGSLTITGAPRV--FKGKVIIGNGGAEYGVRGYITAYDAETGERKW 204 (677)
T ss_dssp -SE--EEEEETTTCCEEEEEETTTTCCSSCBCCSCCEE--ETTEEEECCBCTTTCCBCEEEEEETTTCCEEE
T ss_pred -CE--EEEEECCCCCEEeeecCCcCcCcCcccccCcEE--ECCEEEEEecccccCCCCEEEEEECCCCcEEE
Confidence 22 44454 4 567654210110 111 23432 2566666543 4789999999998766
No 86
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=59.11 E-value=84 Score=26.76 Aligned_cols=206 Identities=7% Similarity=-0.023 Sum_probs=99.7
Q ss_pred eeecceEEEeec-CCeEEEEeCCCcceee-cCCCCCCCCCcccccceeeEEeecCCCCCeEEEEEEeeecccCCCCCCcc
Q 039662 103 GPYDGIFCLLKS-HTLINLWNVSLNEYRV-IPECRPRLPLYTKTHYANVALGLDPVTKDFKLVLILTLWNDHRDSFHDFS 180 (366)
Q Consensus 103 ~s~~GLl~~~~~-~~~~~V~NP~T~~~~~-LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~~~~ 180 (366)
...++.+.+... .+.+.++|+.|++... ++......+.. .......++.++|..+ + ++.... . ..-
T Consensus 97 s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~s~dg~-~-l~~~~~------~---~~~ 164 (353)
T 3vgz_A 97 NNTTQTLWFGNTVNSAVTAIDAKTGEVKGRLVLDDRKRTEE-VRPLQPRELVADDATN-T-VYISGI------G---KES 164 (353)
T ss_dssp ETTTTEEEEEETTTTEEEEEETTTCCEEEEEESCCCCCCSS-CCCCEEEEEEEETTTT-E-EEEEEE------S---SSC
T ss_pred CCCCCEEEEEecCCCEEEEEeCCCCeeEEEEecCCCccccc-cCCCCCceEEECCCCC-E-EEEEec------C---CCc
Confidence 344444555443 4569999999988743 44322111100 0112235677777644 2 222221 0 122
Q ss_pred eEEEEEcCCCceeecCCCccccceeecccceEEECceEEEEEecCCCceEEEEEeCCCceee-EeCCCCCCCCCCccccc
Q 039662 181 HVAVYKFSTNSWRDLEGFEMRYDYMVDRIFNVYLNGFCYWVVCRPDYSKAILSFSMSDEVFE-EMEGPSVPQSTTYYQSV 259 (366)
Q Consensus 181 ~~~vyss~~~~W~~~~~~~~~~~~~~~~~~~v~~~G~lywl~~~~~~~~~Il~fD~~~~~~~-~i~~P~~~~~~~~~~~l 259 (366)
.+.+|+..++.=... .+..... ...-.+.-+|...+.+ .. ...|..+|+.+.+.. .+..+...... ....+
T Consensus 165 ~i~~~d~~~~~~~~~--~~~~~~~--~~~~~~s~dg~~l~~~--~~-~~~i~~~d~~~~~~~~~~~~~~~~~~~-~~~~~ 236 (353)
T 3vgz_A 165 VIWVVDGGNIKLKTA--IQNTGKM--STGLALDSEGKRLYTT--NA-DGELITIDTADNKILSRKKLLDDGKEH-FFINI 236 (353)
T ss_dssp EEEEEETTTTEEEEE--ECCCCTT--CCCCEEETTTTEEEEE--CT-TSEEEEEETTTTEEEEEEECCCSSSCC-CEEEE
T ss_pred eEEEEcCCCCceEEE--ecCCCCc--cceEEECCCCCEEEEE--cC-CCeEEEEECCCCeEEEEEEcCCCCCCc-ccceE
Confidence 577888776532211 1100000 0011222356544444 22 346889999987764 34543321111 11122
Q ss_pred cccceeeEecCe-EEEEEeCCCCCEEEEEEeeCCeeeEEEEecCCCcceeeEEEeeCCe-EEEEE-cCCeEEEEECCCCe
Q 039662 260 KTPWMLGTYDDC-LSLLYSDSFAHTFELWTMTGGNWTKHSTFGPFIETYQPIGFWRKGE-FFLES-SDKRVVLYDSTYQE 336 (366)
Q Consensus 260 ~~~~~~~~~~G~-L~~~~~~~~~~~~~IW~l~~~~W~~~~~i~~~~~~~~~~~~~~~g~-i~~~~-~~~~~~~yd~~~~~ 336 (366)
...-+|+ |++... ....+.+|-++..+-.....+.. . .-+.+..+|+ +++.. .++.+..||.++++
T Consensus 237 -----~~s~dg~~l~~~~~--~~~~v~~~d~~~~~~~~~~~~~~--~--~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~ 305 (353)
T 3vgz_A 237 -----SLDTARQRAFITDS--KAAEVLVVDTRNGNILAKVAAPE--S--LAVLFNPARNEAYVTHRQAGKVSVIDAKSYK 305 (353)
T ss_dssp -----EEETTTTEEEEEES--SSSEEEEEETTTCCEEEEEECSS--C--CCEEEETTTTEEEEEETTTTEEEEEETTTTE
T ss_pred -----EECCCCCEEEEEeC--CCCEEEEEECCCCcEEEEEEcCC--C--ceEEECCCCCEEEEEECCCCeEEEEECCCCe
Confidence 0222455 544443 45677777655322222222221 1 2355667776 55555 37899999999887
Q ss_pred EEE
Q 039662 337 MRD 339 (366)
Q Consensus 337 ~~~ 339 (366)
...
T Consensus 306 ~~~ 308 (353)
T 3vgz_A 306 VVK 308 (353)
T ss_dssp EEE
T ss_pred EEE
Confidence 654
No 87
>1evh_A WH1 domain, protein (MENA EVH1 domain); molecular recognition, actin dynamics, contractIle protein; 1.80A {Mus musculus} SCOP: b.55.1.4 PDB: 2xqn_M 2iyb_A
Probab=58.48 E-value=18 Score=26.32 Aligned_cols=41 Identities=12% Similarity=0.195 Sum_probs=28.9
Q ss_pred eEEEEeCCCcceeecCCCCCCCCCcccccceeeEEeecCCCCCeEEEEEE
Q 039662 117 LINLWNVSLNEYRVIPECRPRLPLYTKTHYANVALGLDPVTKDFKLVLIL 166 (366)
Q Consensus 117 ~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~ 166 (366)
.+++.+|.|+.|. |.... .....+.+..|...+.|+|+...
T Consensus 12 ~V~~~d~~~~~W~--p~~~~-------~g~s~V~~~~d~~~~~yrIv~~~ 52 (112)
T 1evh_A 12 AVMVYDDANKKWV--PAGGS-------TGFSRVHIYHHTGNNTFRVVGRK 52 (112)
T ss_dssp EEEEEETTTTEEE--EGGGC-------CSCEEEEEEEETTTTEEEEEEEE
T ss_pred EEEEEcCCCCceE--ECCCC-------CCceEEEEEEECCCCEEEEEEEE
Confidence 3888999999764 43321 11234778889888899999875
No 88
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=57.84 E-value=1.4e+02 Score=28.81 Aligned_cols=189 Identities=11% Similarity=0.095 Sum_probs=94.3
Q ss_pred eEEEEeCCCcceeecCCCCCCCCCcccccceeeEEeecCCCCCeEEEEEEeeecccCCCCCCcceEEEEEcCCC-ceeec
Q 039662 117 LINLWNVSLNEYRVIPECRPRLPLYTKTHYANVALGLDPVTKDFKLVLILTLWNDHRDSFHDFSHVAVYKFSTN-SWRDL 195 (366)
Q Consensus 117 ~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~~vyss~~~-~W~~~ 195 (366)
.++++|..|++...+..... .......+.+.|..+ + ++.... +.......+.+++..++ ..+.+
T Consensus 236 ~l~~~d~~~~~~~~~~~~~~-------~~~~~~~~~~spdg~-~-l~~~~~------~~~~~~~~v~~~d~~~g~~~~~~ 300 (706)
T 2z3z_A 236 TVGIYHLATGKTVYLQTGEP-------KEKFLTNLSWSPDEN-I-LYVAEV------NRAQNECKVNAYDAETGRFVRTL 300 (706)
T ss_dssp EEEEEETTTTEEEECCCCSC-------TTCEEEEEEECTTSS-E-EEEEEE------CTTSCEEEEEEEETTTCCEEEEE
T ss_pred EEEEEECCCCceEeeccCCC-------CceeEeeEEEECCCC-E-EEEEEe------CCCCCeeEEEEEECCCCceeeEE
Confidence 59999999998776653321 111234566666433 2 332222 21223457778888877 66655
Q ss_pred CCCccccceeecccceEE-E--CceEEEEEecCCCceEEEEEeCCCceeeEeCCCCCCCCCCcccc-ccccceeeEecCe
Q 039662 196 EGFEMRYDYMVDRIFNVY-L--NGFCYWVVCRPDYSKAILSFSMSDEVFEEMEGPSVPQSTTYYQS-VKTPWMLGTYDDC 271 (366)
Q Consensus 196 ~~~~~~~~~~~~~~~~v~-~--~G~lywl~~~~~~~~~Il~fD~~~~~~~~i~~P~~~~~~~~~~~-l~~~~~~~~~~G~ 271 (366)
.. ..............+ - +|.+.+.+. .++...|..+|.+......+..... .... + ...-+|+
T Consensus 301 ~~-~~~~~~~~~~~~~~~sp~~dg~~l~~~~-~~g~~~l~~~~~~~~~~~~l~~~~~-----~v~~~~-----~~spdg~ 368 (706)
T 2z3z_A 301 FV-ETDKHYVEPLHPLTFLPGSNNQFIWQSR-RDGWNHLYLYDTTGRLIRQVTKGEW-----EVTNFA-----GFDPKGT 368 (706)
T ss_dssp EE-EECSSCCCCCSCCEECTTCSSEEEEEEC-TTSSCEEEEEETTSCEEEECCCSSS-----CEEEEE-----EECTTSS
T ss_pred EE-ccCCCeECccCCceeecCCCCEEEEEEc-cCCccEEEEEECCCCEEEecCCCCe-----EEEeee-----EEcCCCC
Confidence 21 000000000011122 2 788666552 3345678888877766655532111 0111 1 0122454
Q ss_pred -EEEEEeCCCCCEEEEEEee--CCeeeEEEEecCCCcceeeEEEeeCCeEEE-EEcC----CeEEEEECCCCe
Q 039662 272 -LSLLYSDSFAHTFELWTMT--GGNWTKHSTFGPFIETYQPIGFWRKGEFFL-ESSD----KRVVLYDSTYQE 336 (366)
Q Consensus 272 -L~~~~~~~~~~~~~IW~l~--~~~W~~~~~i~~~~~~~~~~~~~~~g~i~~-~~~~----~~~~~yd~~~~~ 336 (366)
|++...........||..+ +... ..+..... ...+.+..+|+.++ ...+ ..+..+|+++++
T Consensus 369 ~l~~~~~~~~~~~~~l~~~d~~~~~~---~~l~~~~~-~~~~~~spdg~~l~~~~~~~~~p~~i~l~d~~~~~ 437 (706)
T 2z3z_A 369 RLYFESTEASPLERHFYCIDIKGGKT---KDLTPESG-MHRTQLSPDGSAIIDIFQSPTVPRKVTVTNIGKGS 437 (706)
T ss_dssp EEEEEESSSCTTCBEEEEEETTCCCC---EESCCSSS-EEEEEECTTSSEEEEEEECSSCSCEEEEEESSSCE
T ss_pred EEEEEecCCCCceEEEEEEEcCCCCc---eeccCCCc-eEEEEECCCCCEEEEEecCCCCCcEEEEEECCCCe
Confidence 5555543333467888887 3332 22333222 23455666776443 3222 568999998887
No 89
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=56.97 E-value=1.5e+02 Score=29.13 Aligned_cols=201 Identities=10% Similarity=0.030 Sum_probs=101.7
Q ss_pred eecceEEEee-cCCeEEEEeCCCcceeecCCCCCC-CCCcccccceeeEEeecCCCCCeEEEEEEeeecccCCCCCCcce
Q 039662 104 PYDGIFCLLK-SHTLINLWNVSLNEYRVIPECRPR-LPLYTKTHYANVALGLDPVTKDFKLVLILTLWNDHRDSFHDFSH 181 (366)
Q Consensus 104 s~~GLl~~~~-~~~~~~V~NP~T~~~~~LP~~~~~-~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~~~~~ 181 (366)
-.+|-|-+.. ..+ +..++|.++.+..+...+.. ..... ......++..|.... +.+.. . + -.
T Consensus 321 D~~g~lWigt~~~G-l~~~~~~~~~~~~~~~~~~~~~~~~l-~~~~v~~i~~d~~g~----lWigt----~-~-----~G 384 (781)
T 3v9f_A 321 DSFNNIWIGTWGGG-INFISNAPPTFHTWSYSPTQMNESSL-SNKVVSSVCDDGQGK----LWIGT----D-G-----GG 384 (781)
T ss_dssp CSSCCEEEEEBSSC-EEEECSSCCSCEEEC----CCCSSCC-SSSCEEEEEECTTSC----EEEEE----B-S-----SC
T ss_pred eCCCCEEEEecCCe-EEEeCCCCCcceeeccCccccccCCC-CCcceEEEEEcCCCC----EEEEe----C-C-----Cc
Confidence 3455555554 455 88999998887776532210 00001 122335566665432 44444 1 1 14
Q ss_pred EEEEEcCCCceeecCCCccccceeecccceEEE--CceEEEEEecCCCceEEEEEeCCCceeeEeCCCCCCCCCCccccc
Q 039662 182 VAVYKFSTNSWRDLEGFEMRYDYMVDRIFNVYL--NGFCYWVVCRPDYSKAILSFSMSDEVFEEMEGPSVPQSTTYYQSV 259 (366)
Q Consensus 182 ~~vyss~~~~W~~~~~~~~~~~~~~~~~~~v~~--~G~lywl~~~~~~~~~Il~fD~~~~~~~~i~~P~~~~~~~~~~~l 259 (366)
+..|+..++.++... .+.......-.+++. +|.+ |++.. ...|..||..++++..+..+ .... .....+
T Consensus 385 l~~~~~~~~~~~~~~---~~~~~~~~~v~~i~~d~~g~l-Wigt~---~~Gl~~~~~~~~~~~~~~~~-~~~~-~~v~~i 455 (781)
T 3v9f_A 385 INVFENGKRVAIYNK---ENRELLSNSVLCSLKDSEGNL-WFGTY---LGNISYYNTRLKKFQIIELE-KNEL-LDVRVF 455 (781)
T ss_dssp EEEEETTEEEEECC--------CCCSBEEEEEECTTSCE-EEEET---TEEEEEECSSSCEEEECCST-TTCC-CCEEEE
T ss_pred EEEEECCCCeEEEcc---CCCCCCCcceEEEEECCCCCE-EEEec---cCCEEEEcCCCCcEEEeccC-CCCC-CeEEEE
Confidence 566777766665441 000000011223333 4554 55522 24699999999999877543 1111 111222
Q ss_pred cccceeeEe-cCeEEEEEeCCCCCEEEEEEee--CCeeeEEEEecCC---CcceeeEEEeeCCeEEEEEcCCeEEEEECC
Q 039662 260 KTPWMLGTY-DDCLSLLYSDSFAHTFELWTMT--GGNWTKHSTFGPF---IETYQPIGFWRKGEFFLESSDKRVVLYDST 333 (366)
Q Consensus 260 ~~~~~~~~~-~G~L~~~~~~~~~~~~~IW~l~--~~~W~~~~~i~~~---~~~~~~~~~~~~g~i~~~~~~~~~~~yd~~ 333 (366)
.+. +|.|.+... .. |+.++ ...|......... .....-+....+|.+.+....+.++.||++
T Consensus 456 ------~~d~~g~lwigt~----~G--l~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~g~lWigt~~~Gl~~~~~~ 523 (781)
T 3v9f_A 456 ------YEDKNKKIWIGTH----AG--VFVIDLASKKVIHHYDTSNSQLLENFVRSIAQDSEGRFWIGTFGGGVGIYTPD 523 (781)
T ss_dssp ------EECTTSEEEEEET----TE--EEEEESSSSSCCEEECTTTSSCSCSCEEEEEECTTCCEEEEESSSCEEEECTT
T ss_pred ------EECCCCCEEEEEC----Cc--eEEEeCCCCeEEecccCcccccccceeEEEEEcCCCCEEEEEcCCCEEEEeCC
Confidence 333 577766543 22 44455 3556554432210 122233444556888888766789999999
Q ss_pred CCeEEEEE
Q 039662 334 YQEMRDIR 341 (366)
Q Consensus 334 ~~~~~~i~ 341 (366)
+++++.+.
T Consensus 524 ~~~~~~~~ 531 (781)
T 3v9f_A 524 MQLVRKFN 531 (781)
T ss_dssp CCEEEEEC
T ss_pred CCeEEEcc
Confidence 98887653
No 90
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=56.48 E-value=93 Score=26.47 Aligned_cols=29 Identities=21% Similarity=0.242 Sum_probs=20.1
Q ss_pred EEEeeCCeEEEE-EcCCeEEEEECCCCeEE
Q 039662 310 IGFWRKGEFFLE-SSDKRVVLYDSTYQEMR 338 (366)
Q Consensus 310 ~~~~~~g~i~~~-~~~~~~~~yd~~~~~~~ 338 (366)
+.+..++.+++. ..++.+..||+++++..
T Consensus 279 ~~~sp~~~~l~s~~~dg~i~iwd~~~~~~~ 308 (368)
T 3mmy_A 279 IAFHPVHGTLATVGSDGRFSFWDKDARTKL 308 (368)
T ss_dssp EEECTTTCCEEEEETTSCEEEEETTTTEEE
T ss_pred EEEecCCCEEEEEccCCeEEEEECCCCcEE
Confidence 445566665544 45888999999987654
No 91
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=56.21 E-value=1.1e+02 Score=27.07 Aligned_cols=101 Identities=10% Similarity=0.092 Sum_probs=55.9
Q ss_pred ceEEEEEeCCCcee-eEeCCCCCCCCCCccccccccceeeEecCeEEEEEeCCCCCEEEEEEeeCCeeeEEEEecCCCcc
Q 039662 228 SKAILSFSMSDEVF-EEMEGPSVPQSTTYYQSVKTPWMLGTYDDCLSLLYSDSFAHTFELWTMTGGNWTKHSTFGPFIET 306 (366)
Q Consensus 228 ~~~Il~fD~~~~~~-~~i~~P~~~~~~~~~~~l~~~~~~~~~~G~L~~~~~~~~~~~~~IW~l~~~~W~~~~~i~~~~~~ 306 (366)
...|..+|+.+++. ..+..+.. ...+ ...-+|+..++........+.||-+......+...+......
T Consensus 283 d~~i~i~d~~~~~~~~~~~~~~~------v~~~-----~~s~~~~~l~~~~g~~dg~i~v~~~~~~~~~~~~~~~~h~~~ 351 (401)
T 4aez_A 283 DKQIHFWNAATGARVNTVDAGSQ------VTSL-----IWSPHSKEIMSTHGFPDNNLSIWSYSSSGLTKQVDIPAHDTR 351 (401)
T ss_dssp TCEEEEEETTTCCEEEEEECSSC------EEEE-----EECSSSSEEEEEECTTTCEEEEEEEETTEEEEEEEEECCSSC
T ss_pred CCEEEEEECCCCCEEEEEeCCCc------EEEE-----EECCCCCeEEEEeecCCCcEEEEecCCccceeEEEecCCCCC
Confidence 34688888887654 23332211 1122 022256655554333568999999885555665555432222
Q ss_pred eeeEEEeeCCeEEEEE-cCCeEEEEECCCCeEEE
Q 039662 307 YQPIGFWRKGEFFLES-SDKRVVLYDSTYQEMRD 339 (366)
Q Consensus 307 ~~~~~~~~~g~i~~~~-~~~~~~~yd~~~~~~~~ 339 (366)
..-+.+..+|..++.. .++.+..||+.+++...
T Consensus 352 v~~~~~s~dg~~l~s~~~dg~i~iw~~~~~~~~~ 385 (401)
T 4aez_A 352 VLYSALSPDGRILSTAASDENLKFWRVYDGDHVK 385 (401)
T ss_dssp CCEEEECTTSSEEEEECTTSEEEEEECCC-----
T ss_pred EEEEEECCCCCEEEEEeCCCcEEEEECCCCcccc
Confidence 2334556677766554 48899999998876543
No 92
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=56.14 E-value=1.1e+02 Score=27.34 Aligned_cols=184 Identities=9% Similarity=0.040 Sum_probs=94.1
Q ss_pred eEEEEeCCCcceeecCCCCCCCCCcccccceeeEEeecCCCCCeEEEEEEeeecccCCCCCCcceEEEEEcCCCceeecC
Q 039662 117 LINLWNVSLNEYRVIPECRPRLPLYTKTHYANVALGLDPVTKDFKLVLILTLWNDHRDSFHDFSHVAVYKFSTNSWRDLE 196 (366)
Q Consensus 117 ~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~~vyss~~~~W~~~~ 196 (366)
.++++|..|++.+.+...+. ....+.+.|..+ +++.... . +....+.+++..++..+.+.
T Consensus 204 ~i~~~d~~tg~~~~l~~~~~----------~~~~~~~spdg~--~la~~~~------~--~g~~~i~~~d~~~~~~~~l~ 263 (415)
T 2hqs_A 204 ALVIQTLANGAVRQVASFPR----------HNGAPAFSPDGS--KLAFALS------K--TGSLNLYVMDLASGQIRQVT 263 (415)
T ss_dssp EEEEEETTTCCEEEEECCSS----------CEEEEEECTTSS--EEEEEEC------T--TSSCEEEEEETTTCCEEECC
T ss_pred EEEEEECCCCcEEEeecCCC----------cccCEEEcCCCC--EEEEEEe------c--CCCceEEEEECCCCCEEeCc
Confidence 69999999998876654321 124566766533 2332222 1 12346778888887766653
Q ss_pred CCccccceeecccceEE--ECce-EEEEEecCCCceEEEEEeCCCceeeEeCCCCCCCCCCccccccccceeeEecCe-E
Q 039662 197 GFEMRYDYMVDRIFNVY--LNGF-CYWVVCRPDYSKAILSFSMSDEVFEEMEGPSVPQSTTYYQSVKTPWMLGTYDDC-L 272 (366)
Q Consensus 197 ~~~~~~~~~~~~~~~v~--~~G~-lywl~~~~~~~~~Il~fD~~~~~~~~i~~P~~~~~~~~~~~l~~~~~~~~~~G~-L 272 (366)
... .. ...+. -+|. ++... ...+...|..+|+.+.+...+..... ....+ ...-+|+ |
T Consensus 264 ~~~---~~----~~~~~~spdg~~l~~~s-~~~g~~~i~~~d~~~~~~~~l~~~~~-----~~~~~-----~~spdG~~l 325 (415)
T 2hqs_A 264 DGR---SN----NTEPTWFPDSQNLAFTS-DQAGRPQVYKVNINGGAPQRITWEGS-----QNQDA-----DVSSDGKFM 325 (415)
T ss_dssp CCS---SC----EEEEEECTTSSEEEEEE-CTTSSCEEEEEETTSSCCEECCCSSS-----EEEEE-----EECTTSSEE
T ss_pred CCC---Cc----ccceEECCCCCEEEEEE-CCCCCcEEEEEECCCCCEEEEecCCC-----cccCe-----EECCCCCEE
Confidence 111 10 11111 2565 44443 22334578889998876554432211 11111 0223666 4
Q ss_pred EEEEeCCCCCEEEEEEeeCCeeeEEEEecCCCcceeeEEEeeCCeE-EEEEcCC---eEEEEECCCCeEEEEEE
Q 039662 273 SLLYSDSFAHTFELWTMTGGNWTKHSTFGPFIETYQPIGFWRKGEF-FLESSDK---RVVLYDSTYQEMRDIRI 342 (366)
Q Consensus 273 ~~~~~~~~~~~~~IW~l~~~~W~~~~~i~~~~~~~~~~~~~~~g~i-~~~~~~~---~~~~yd~~~~~~~~i~~ 342 (366)
++...+.....+.+|-+++.... .+.... ....+.+..+|.. ++...+. .++.+|++++..+.+..
T Consensus 326 ~~~~~~~g~~~i~~~d~~~~~~~---~l~~~~-~~~~~~~spdg~~l~~~s~~~~~~~l~~~d~~g~~~~~l~~ 395 (415)
T 2hqs_A 326 VMVSSNGGQQHIAKQDLATGGVQ---VLSSTF-LDETPSLAPNGTMVIYSSSQGMGSVLNLVSTDGRFKARLPA 395 (415)
T ss_dssp EEEEECSSCEEEEEEETTTCCEE---ECCCSS-SCEEEEECTTSSEEEEEEEETTEEEEEEEETTSCCEEECCC
T ss_pred EEEECcCCceEEEEEECCCCCEE---EecCCC-CcCCeEEcCCCCEEEEEEcCCCccEEEEEECCCCcEEEeeC
Confidence 44444322334455544433322 222211 2233455667764 4444333 79999999888877653
No 93
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=56.02 E-value=1.5e+02 Score=28.70 Aligned_cols=188 Identities=7% Similarity=0.025 Sum_probs=87.3
Q ss_pred eEEEEeCCC-cceeecCCCCCCCCCcccccceeeEEeecCCCCCeEEEEEEeeecccCCCCCCcceEEEEEcCCCceeec
Q 039662 117 LINLWNVSL-NEYRVIPECRPRLPLYTKTHYANVALGLDPVTKDFKLVLILTLWNDHRDSFHDFSHVAVYKFSTNSWRDL 195 (366)
Q Consensus 117 ~~~V~NP~T-~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~~vyss~~~~W~~~ 195 (366)
.++++|..| ++...+..... .......+.+ |.. .+-++.... .......+.+++..++..+.+
T Consensus 264 ~l~~~d~~~~~~~~~~~~~~~-------~~~~~~~~~~-pDg-~~l~~~~~~-------~~~~~~~i~~~d~~~g~~~~~ 327 (741)
T 2ecf_A 264 KLGVISPAEQAQTQWIDLGKE-------QDIYLARVNW-RDP-QHLSFQRQS-------RDQKKLDLVEVTLASNQQRVL 327 (741)
T ss_dssp EEEEECSSTTCCCEEECCCSC-------SSEEEEEEEE-EET-TEEEEEEEE-------TTSSEEEEEEEETTTCCEEEE
T ss_pred EEEEEECCCCCceEEecCCCC-------cceEEEEEEe-CCC-CEEEEEEec-------ccCCeEEEEEEECCCCceEEE
Confidence 588999999 88776654311 1112244555 543 333332221 112345777788888776654
Q ss_pred CCCcccccee-ecccceEEECceEEEEEecCCCceEEEEEeCCCceeeEeCCCCCCCCCCccccccccceeeEecCe-EE
Q 039662 196 EGFEMRYDYM-VDRIFNVYLNGFCYWVVCRPDYSKAILSFSMSDEVFEEMEGPSVPQSTTYYQSVKTPWMLGTYDDC-LS 273 (366)
Q Consensus 196 ~~~~~~~~~~-~~~~~~v~~~G~lywl~~~~~~~~~Il~fD~~~~~~~~i~~P~~~~~~~~~~~l~~~~~~~~~~G~-L~ 273 (366)
..... .... ........-+|.+++... .++...|..+|++.. ...+. ... .....+ ....-+|+ |.
T Consensus 328 ~~~~~-~~~~~~~~~~~~spdg~~~~~~~-~~g~~~l~~~~~~~~-~~~l~--~~~---~~v~~~----~~~s~dg~~l~ 395 (741)
T 2ecf_A 328 AHETS-PTWVPLHNSLRFLDDGSILWSSE-RTGFQHLYRIDSKGK-AAALT--HGN---WSVDEL----LAVDEKAGLAY 395 (741)
T ss_dssp EEEEC-SSCCCCCSCCEECTTSCEEEEEC-TTSSCEEEEECSSSC-EEESC--CSS---SCEEEE----EEEETTTTEEE
T ss_pred EEcCC-CCcCCcCCceEECCCCeEEEEec-CCCccEEEEEcCCCC-eeeee--ecc---eEEEeE----eEEeCCCCEEE
Confidence 21000 0000 001112223788777653 334567888887765 43332 211 111111 00233565 54
Q ss_pred EEEeCCCCCEEEEEEee-CCeeeEEEEecCCCcceeeEEEeeCCeEEEEE-c----CCeEEEEECCCC
Q 039662 274 LLYSDSFAHTFELWTMT-GGNWTKHSTFGPFIETYQPIGFWRKGEFFLES-S----DKRVVLYDSTYQ 335 (366)
Q Consensus 274 ~~~~~~~~~~~~IW~l~-~~~W~~~~~i~~~~~~~~~~~~~~~g~i~~~~-~----~~~~~~yd~~~~ 335 (366)
+.........+.||.++ ++. ...++...... ..+.+..+|+.++.. . ...++.+|..++
T Consensus 396 ~~~~~~~~~~~~l~~~~~~g~--~~~~l~~~~~~-~~~~~spdg~~l~~~~~~~~~p~~~~l~~~~~~ 460 (741)
T 2ecf_A 396 FRAGIESARESQIYAVPLQGG--QPQRLSKAPGM-HSASFARNASVYVDSWSNNSTPPQIELFRANGE 460 (741)
T ss_dssp EEECSSCTTCBEEEEEETTCC--CCEECCCSCSE-EEEEECTTSSEEEEEEEETTEEEEEEEEETTSC
T ss_pred EEEeCCCCceEEEEEEEcCCC--CeeecccCCCc-eEEEECCCCCEEEEEecCCCCCCeEEEEEcCCC
Confidence 44443334488999987 321 11223222222 344455666543332 1 135667776544
No 94
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=55.81 E-value=1.3e+02 Score=29.29 Aligned_cols=114 Identities=13% Similarity=0.142 Sum_probs=62.7
Q ss_pred cceEEECceEEEEEecCCCceEEEEEeCCCce--eeEeCCCCCCC------CCCccccccccceeeEecCeEEEEEeCCC
Q 039662 209 IFNVYLNGFCYWVVCRPDYSKAILSFSMSDEV--FEEMEGPSVPQ------STTYYQSVKTPWMLGTYDDCLSLLYSDSF 280 (366)
Q Consensus 209 ~~~v~~~G~lywl~~~~~~~~~Il~fD~~~~~--~~~i~~P~~~~------~~~~~~~l~~~~~~~~~~G~L~~~~~~~~ 280 (366)
..++..+|.+|..+ . ...|.++|.++++ |+. +.+.... +......+ ...+|+|++...
T Consensus 64 ~~P~v~~g~vyv~~--~--~~~v~AlD~~tG~~~W~~-~~~~~~~~~~~~~~~~~~~~~------~~~~g~v~v~~~--- 129 (689)
T 1yiq_A 64 ATPIVVDGVMYTTG--P--FSVVYALDARDGRLIWKY-DPQSDRHRAGEACCDAVNRGV------AVWKGKVYVGVL--- 129 (689)
T ss_dssp CCCEEETTEEEEEC--G--GGCEEEEETTTCCEEEEE-CCCCCGGGGGGCTTCSCCCCC------EEETTEEEEECT---
T ss_pred ecCEEECCEEEEEc--C--CCeEEEEECCCCceeEEE-cCCCCccccccccccCCCCcc------EEECCEEEEEcc---
Confidence 45678899999875 2 2359999988754 543 2222110 00001123 556777766543
Q ss_pred CCEEEEEEee---C-CeeeEEEEecCCC--c-ceeeEEEeeCCeEEEEEc------CCeEEEEECCCCeEEEE
Q 039662 281 AHTFELWTMT---G-GNWTKHSTFGPFI--E-TYQPIGFWRKGEFFLESS------DKRVVLYDSTYQEMRDI 340 (366)
Q Consensus 281 ~~~~~IW~l~---~-~~W~~~~~i~~~~--~-~~~~~~~~~~g~i~~~~~------~~~~~~yd~~~~~~~~i 340 (366)
... |..++ | ..|......+... . ...|+. .++.+++... ++.++.||.+|++..+-
T Consensus 130 dg~--l~AlDa~TG~~~W~~~~~~~~~~~~~~~~sP~v--~~g~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~ 198 (689)
T 1yiq_A 130 DGR--LEAIDAKTGQRAWSVDTRADHKRSYTITGAPRV--VNGKVVIGNGGAEFGVRGYVTAYDAETGKEAWR 198 (689)
T ss_dssp TSE--EEEEETTTCCEEEEEECCSCTTSCCBCCSCCEE--ETTEEEECCBCTTTCCBCEEEEEETTTCCEEEE
T ss_pred CCE--EEEEECCCCCEeeeecCcCCCCCCccccCCcEE--ECCEEEEEeCCCccCCCCEEEEEECCCCcEEEE
Confidence 122 44454 4 5687654212111 1 123433 3566666532 47899999999987653
No 95
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=55.56 E-value=1.4e+02 Score=28.39 Aligned_cols=117 Identities=15% Similarity=0.066 Sum_probs=62.1
Q ss_pred cceEEECceEEEEEecCCCceEEEEEeCCCce--eeEe-CCCCCCC--CCCccccccccceeeEecCeEEEEEeCCCCCE
Q 039662 209 IFNVYLNGFCYWVVCRPDYSKAILSFSMSDEV--FEEM-EGPSVPQ--STTYYQSVKTPWMLGTYDDCLSLLYSDSFAHT 283 (366)
Q Consensus 209 ~~~v~~~G~lywl~~~~~~~~~Il~fD~~~~~--~~~i-~~P~~~~--~~~~~~~l~~~~~~~~~~G~L~~~~~~~~~~~ 283 (366)
..++..+|.+|... ..+ .|.++|.++++ |+.- ..|.... +......+ ...+|+|++...+ .
T Consensus 62 ~~P~v~~g~vyv~~--~~~--~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~g~------a~~~~~v~~~t~d---g- 127 (582)
T 1flg_A 62 SQAIVSDGVIYVTA--SYS--RLFALDAKTGKRLWTYNHRLPDDIRPCCDVVNRGA------AIYGDKVFFGTLD---A- 127 (582)
T ss_dssp CCCEEETTEEEEEE--TTT--EEEEEESSSCCEEEEEECCCCTTCCCSSCSCCCCC------EEETTEEEEEETT---T-
T ss_pred eccEEECCEEEEEc--CCC--CEEEEECCCCcEEEEEcCCCCcccccccccCCCcc------EEECCEEEEEeCC---C-
Confidence 45678999999986 322 39999998754 5442 2222110 00001223 5567777665432 1
Q ss_pred EEEEEee---C-CeeeEEEEecC-C-CcceeeEEEee--CC--eEEEEEc------CCeEEEEECCCCeEEEE
Q 039662 284 FELWTMT---G-GNWTKHSTFGP-F-IETYQPIGFWR--KG--EFFLESS------DKRVVLYDSTYQEMRDI 340 (366)
Q Consensus 284 ~~IW~l~---~-~~W~~~~~i~~-~-~~~~~~~~~~~--~g--~i~~~~~------~~~~~~yd~~~~~~~~i 340 (366)
.|..++ | ..|.....-.. . .....|+.... +| .+++... ++.++.||.+|++..+.
T Consensus 128 -~l~AlD~~TG~~~W~~~~~~~~~~~~~~~sP~v~~~~~~G~~~v~vg~~~~e~~~~g~v~alD~~tG~~~W~ 199 (582)
T 1flg_A 128 -SVVALNKNTGKVVWKKKFADHGAGYTMTGAPTIVKDGKTGKVLLIHGSSGDEFGVVGRLFARDPDTGEEIWM 199 (582)
T ss_dssp -EEEEEESSSCCEEEEEECSCGGGTCBCCSCCEEEECTTTCCEEEEECCBCGGGCCBCEEEEECTTTCCEEEE
T ss_pred -EEEEEECCCCCEEeeecCCCCCcCcccccCCEEeCCCcCCcEEEEEeccccccCCCCEEEEEECCCCCEEee
Confidence 345555 3 56765421110 0 01124443322 13 3443321 57899999999988774
No 96
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=54.47 E-value=1e+02 Score=26.20 Aligned_cols=110 Identities=5% Similarity=-0.026 Sum_probs=65.1
Q ss_pred ceEEEEEecCCCceEEEEEeCCCcee-eEeCCCCCCCCCCccccccccceeeEecCeEEEEEeCCCCCEEEEEEeeCCee
Q 039662 216 GFCYWVVCRPDYSKAILSFSMSDEVF-EEMEGPSVPQSTTYYQSVKTPWMLGTYDDCLSLLYSDSFAHTFELWTMTGGNW 294 (366)
Q Consensus 216 G~lywl~~~~~~~~~Il~fD~~~~~~-~~i~~P~~~~~~~~~~~l~~~~~~~~~~G~L~~~~~~~~~~~~~IW~l~~~~W 294 (366)
|.+|--.. ..+...|..+|+++++. ..+++|.... ...+ ...+++|+++.. .... +++.+-..-
T Consensus 32 g~Lyvstg-~~~~s~v~~iD~~tg~v~~~i~l~~~~f----geGi------~~~g~~lyv~t~--~~~~--v~viD~~t~ 96 (266)
T 2iwa_A 32 DTLFESTG-LYGRSSVRQVALQTGKVENIHKMDDSYF----GEGL------TLLNEKLYQVVW--LKNI--GFIYDRRTL 96 (266)
T ss_dssp TEEEEEEC-STTTCEEEEEETTTCCEEEEEECCTTCC----EEEE------EEETTEEEEEET--TCSE--EEEEETTTT
T ss_pred CeEEEECC-CCCCCEEEEEECCCCCEEEEEecCCCcc----eEEE------EEeCCEEEEEEe--cCCE--EEEEECCCC
Confidence 67777652 12356899999998876 4566665321 1123 445677887764 2333 555662233
Q ss_pred eEEEEecCCCcceeeEEEeeCCe-EEEEEcCCeEEEEECCCCe-EEEEEE
Q 039662 295 TKHSTFGPFIETYQPIGFWRKGE-FFLESSDKRVVLYDSTYQE-MRDIRI 342 (366)
Q Consensus 295 ~~~~~i~~~~~~~~~~~~~~~g~-i~~~~~~~~~~~yd~~~~~-~~~i~~ 342 (366)
..+.+|+.. .....++..+|+ +++...++.+...|++|.+ .+.|.+
T Consensus 97 ~v~~~i~~g--~~~g~glt~Dg~~l~vs~gs~~l~viD~~t~~v~~~I~V 144 (266)
T 2iwa_A 97 SNIKNFTHQ--MKDGWGLATDGKILYGSDGTSILYEIDPHTFKLIKKHNV 144 (266)
T ss_dssp EEEEEEECC--SSSCCEEEECSSSEEEECSSSEEEEECTTTCCEEEEEEC
T ss_pred cEEEEEECC--CCCeEEEEECCCEEEEECCCCeEEEEECCCCcEEEEEEE
Confidence 455556532 112345555654 6666557899999999965 455654
No 97
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=53.47 E-value=1.8e+02 Score=28.77 Aligned_cols=208 Identities=8% Similarity=0.068 Sum_probs=99.8
Q ss_pred eeecceEEEeecCCeEEEEeCCCcceeecCCCCCCCCCcccccceeeEEeecCCCCCeEEEEEEeeecccCCCCCCcceE
Q 039662 103 GPYDGIFCLLKSHTLINLWNVSLNEYRVIPECRPRLPLYTKTHYANVALGLDPVTKDFKLVLILTLWNDHRDSFHDFSHV 182 (366)
Q Consensus 103 ~s~~GLl~~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~ 182 (366)
...+|-|-+....+ ++++||.++++..+...+... ... .......+..|+..+ +.+.. .. -.+
T Consensus 270 ~d~~g~lWigt~~G-l~~~~~~~~~~~~~~~~~~~~-~~l-~~~~i~~i~~D~~g~----lWigt----~~------~Gl 332 (795)
T 4a2l_A 270 MDSQNRLWIGTFND-LNIYHEGTDSFASYSSNPVEN-GSL-SQRSVRSIFMDSQGG----MWLGT----YF------GGL 332 (795)
T ss_dssp ECTTSCEEEEESSC-EEEEETTTTEEEEECCCTTST-TSC-SSSCEEEEEECTTSC----EEEEE----SS------SCE
T ss_pred EcCCCCEEEEeCCh-hheEcCCCCeEEEEecCCCCC-CCC-CCCcEEEEEEeCCcC----EEEEE----CC------CCe
Confidence 33456665555555 888899988887775433211 001 122345566665433 55554 11 145
Q ss_pred EEEEcCCCceeecCCCccccceeecccceEEE--CceEEEEEecCCCceEEEEEeCCCceeeEeCCCCCC-C---CCCcc
Q 039662 183 AVYKFSTNSWRDLEGFEMRYDYMVDRIFNVYL--NGFCYWVVCRPDYSKAILSFSMSDEVFEEMEGPSVP-Q---STTYY 256 (366)
Q Consensus 183 ~vyss~~~~W~~~~~~~~~~~~~~~~~~~v~~--~G~lywl~~~~~~~~~Il~fD~~~~~~~~i~~P~~~-~---~~~~~ 256 (366)
..|+..++.++.....+.........-.+++. +|. .|++.. ...|..+|..+++|..+..+... . .....
T Consensus 333 ~~~~~~~~~~~~~~~~~~~~~l~~~~V~~i~~d~~g~-lWiGt~---~~Gl~~~~~~~~~~~~~~~~~~~~~~~l~~~~v 408 (795)
T 4a2l_A 333 NYYHPIRNRFKNIRNIPYKNSLSDNVVSCIVEDKDKN-LWIGTN---DGGLNLYNPITQRFTSYTLQEDESARGIGSNNI 408 (795)
T ss_dssp EEECGGGGSSEEECCCTTSSSCSCSSEEEEEECTTSC-EEEEES---SSCEEEECTTTCCEEEECCC------CCSCSCE
T ss_pred EEeCCCcccceEEcCCCCCCCCCCCeeEEEEECCCCC-EEEEEC---CCCeEEEcCCCCcEEEEecCCCCcccCCCCccE
Confidence 66666666665542111100000011223333 354 456532 22599999999999877543311 0 01111
Q ss_pred ccccccceeeE-ecCe-EEEEEeCCCCCEEEEEEeeCCeeeEEEEecC-C-CcceeeEEEeeCCeEEEEEcCCeEEEEEC
Q 039662 257 QSVKTPWMLGT-YDDC-LSLLYSDSFAHTFELWTMTGGNWTKHSTFGP-F-IETYQPIGFWRKGEFFLESSDKRVVLYDS 332 (366)
Q Consensus 257 ~~l~~~~~~~~-~~G~-L~~~~~~~~~~~~~IW~l~~~~W~~~~~i~~-~-~~~~~~~~~~~~g~i~~~~~~~~~~~yd~ 332 (366)
..+ .+ .+|. |.+... ...+..+-.+.+.+........ . ......+....+|.+++... ..++.||+
T Consensus 409 ~~i------~~d~~g~~lWigt~---~~Gl~~~d~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~lwigt~-~Gl~~~~~ 478 (795)
T 4a2l_A 409 KAV------YVDEKKSLVYIGTH---AGGLSILHRNSGQVENFNQRNSQLVNENVYAILPDGEGNLWLGTL-SALVRFNP 478 (795)
T ss_dssp EEE------EEETTTTEEEEEET---TTEEEEEETTTCCEEEECTTTSCCSCSCEEEEEECSSSCEEEEES-SCEEEEET
T ss_pred EEE------EEcCCCCEEEEEeC---cCceeEEeCCCCcEEEeecCCCCcCCCeeEEEEECCCCCEEEEec-CceeEEeC
Confidence 222 33 3566 665443 1233322222233222111010 1 11122233344577887765 78999999
Q ss_pred CCCeEEEEE
Q 039662 333 TYQEMRDIR 341 (366)
Q Consensus 333 ~~~~~~~i~ 341 (366)
++++++.+.
T Consensus 479 ~~~~~~~~~ 487 (795)
T 4a2l_A 479 EQRSFTTIE 487 (795)
T ss_dssp TTTEEEECC
T ss_pred CCCeEEEcc
Confidence 998887653
No 98
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=53.25 E-value=1.7e+02 Score=28.44 Aligned_cols=113 Identities=9% Similarity=0.078 Sum_probs=58.4
Q ss_pred ECceEEEEEecCCCceEEEEEeCCCc---eeeEeCCCCCCCCCCccccccccceeeEecCeEEEEEeCCCCCEEEEEEee
Q 039662 214 LNGFCYWVVCRPDYSKAILSFSMSDE---VFEEMEGPSVPQSTTYYQSVKTPWMLGTYDDCLSLLYSDSFAHTFELWTMT 290 (366)
Q Consensus 214 ~~G~lywl~~~~~~~~~Il~fD~~~~---~~~~i~~P~~~~~~~~~~~l~~~~~~~~~~G~L~~~~~~~~~~~~~IW~l~ 290 (366)
-++.+|.++........|+..|+++. .|+.+ .|.... .. .+ ...++.|.+...... .-.|++++
T Consensus 290 ~g~~l~~~t~~~~~~~~l~~~d~~~~~~~~~~~l-~~~~~~---~~-~~------s~~g~~lv~~~~~~g--~~~l~~~d 356 (693)
T 3iuj_A 290 KGSTLYLLTNRDAPNRRLVTVDAANPGPAHWRDL-IPERQQ---VL-TV------HSGSGYLFAEYMVDA--TARVEQFD 356 (693)
T ss_dssp ETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEE-ECCCSS---CE-EE------EEETTEEEEEEEETT--EEEEEEEC
T ss_pred cCCEEEEEECCCCCCCEEEEEeCCCCCccccEEE-ecCCCC---EE-EE------EEECCEEEEEEEECC--eeEEEEEE
Confidence 35778888743223578999999874 35543 222211 11 22 444566766665333 33455555
Q ss_pred -CCeeeEEEEecCCC-cceeeEEEeeC-CeEEEEEcC----CeEEEEECCCCeEEEEE
Q 039662 291 -GGNWTKHSTFGPFI-ETYQPIGFWRK-GEFFLESSD----KRVVLYDSTYQEMRDIR 341 (366)
Q Consensus 291 -~~~W~~~~~i~~~~-~~~~~~~~~~~-g~i~~~~~~----~~~~~yd~~~~~~~~i~ 341 (366)
+..+.+ .+.... .....+....+ +.+++...+ ..++.||+++++.+.+.
T Consensus 357 ~~g~~~~--~l~~p~~~~~~~~~~~~d~~~l~~~~ss~~tP~~l~~~d~~~g~~~~l~ 412 (693)
T 3iuj_A 357 YEGKRVR--EVALPGLGSVSGFNGKHDDPALYFGFENYAQPPTLYRFEPKSGAISLYR 412 (693)
T ss_dssp TTSCEEE--EECCSSSSEEEECCCCTTCSCEEEEEECSSSCCEEEEECTTTCCEEEEE
T ss_pred CCCCeeE--EeecCCCceEEeeecCCCCCEEEEEecCCCCCCEEEEEECCCCeEEEEE
Confidence 333332 233211 11111111223 346555443 78999999988876654
No 99
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=52.71 E-value=97 Score=29.21 Aligned_cols=114 Identities=9% Similarity=0.021 Sum_probs=65.7
Q ss_pred CceEEEEEecCCCceEEEEEeCCCceeeE-eCCCCCCCCCCccccccccceeeEec-CeEEEEEeCCCCCEEEEEEee-C
Q 039662 215 NGFCYWVVCRPDYSKAILSFSMSDEVFEE-MEGPSVPQSTTYYQSVKTPWMLGTYD-DCLSLLYSDSFAHTFELWTMT-G 291 (366)
Q Consensus 215 ~G~lywl~~~~~~~~~Il~fD~~~~~~~~-i~~P~~~~~~~~~~~l~~~~~~~~~~-G~L~~~~~~~~~~~~~IW~l~-~ 291 (366)
+|...+.+.. ....|..+|+.+.+... ++.......... ..+ ..-+ |.+.+... ....++.||-.+ +
T Consensus 334 dg~~l~va~~--~~~~v~v~D~~tg~l~~~i~~g~~ph~g~g-~~~------~~p~~g~~~~s~~-~~d~~V~v~d~~~~ 403 (543)
T 1nir_A 334 SHRYFMTAAN--NSNKVAVIDSKDRRLSALVDVGKTPHPGRG-ANF------VHPKYGPVWSTSH-LGDGSISLIGTDPK 403 (543)
T ss_dssp TSCEEEEEEG--GGTEEEEEETTTTEEEEEEECSSSBCCTTC-EEE------EETTTEEEEEEEB-SSSSEEEEEECCTT
T ss_pred CCCEEEEEec--CCCeEEEEECCCCeEEEeeccCCCCCCCCC-ccc------CCCCCccEEEecc-CCCceEEEEEeCCC
Confidence 4654444422 23468889999987643 443211110000 111 2223 55544432 245789999887 2
Q ss_pred ----CeeeEEEEecCCCcceeeEEEeeCCeEEEEEc--------CCeEEEEECCCCeEE
Q 039662 292 ----GNWTKHSTFGPFIETYQPIGFWRKGEFFLESS--------DKRVVLYDSTYQEMR 338 (366)
Q Consensus 292 ----~~W~~~~~i~~~~~~~~~~~~~~~g~i~~~~~--------~~~~~~yd~~~~~~~ 338 (366)
..|..+.++.....-...+.++.+|..+.... +..+.+||.++.+..
T Consensus 404 ~~~~~~~~~v~~l~~~g~~~~~v~~~pdg~~l~v~~~~~~~~~~~~~v~v~d~~~~~~~ 462 (543)
T 1nir_A 404 NHPQYAWKKVAELQGQGGGSLFIKTHPKSSHLYVDTTFNPDARISQSVAVFDLKNLDAK 462 (543)
T ss_dssp TCTTTBTSEEEEEECSCSCCCCEECCTTCCEEEECCTTCSSHHHHTCEEEEETTCTTSC
T ss_pred CCchhcCeEEEEEEcCCCCceEEEcCCCCCcEEEecCCCCCcccCceEEEEECCCCCCC
Confidence 45999998885433334566677887666643 568999999987643
No 100
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=52.53 E-value=1.5e+02 Score=27.80 Aligned_cols=194 Identities=8% Similarity=0.049 Sum_probs=97.4
Q ss_pred ecceEEEeec-CCeEEEEeCCCcceee-cCCCCCCCCCcccccceeeEEeecCCCCCeEEEEEEeeecccCCCCCCcceE
Q 039662 105 YDGIFCLLKS-HTLINLWNVSLNEYRV-IPECRPRLPLYTKTHYANVALGLDPVTKDFKLVLILTLWNDHRDSFHDFSHV 182 (366)
Q Consensus 105 ~~GLl~~~~~-~~~~~V~NP~T~~~~~-LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~ 182 (366)
-+|.+++... ++.+.|+|+.|++... ++... . ..++.++|..+ | ++.... + -.+
T Consensus 147 p~~~~~vs~~~d~~V~v~D~~t~~~~~~i~~g~---------~--~~~v~~spdg~-~-l~v~~~------d-----~~V 202 (543)
T 1nir_A 147 LPNLFSVTLRDAGQIALVDGDSKKIVKVIDTGY---------A--VHISRMSASGR-Y-LLVIGR------D-----ARI 202 (543)
T ss_dssp GGGEEEEEEGGGTEEEEEETTTCCEEEEEECST---------T--EEEEEECTTSC-E-EEEEET------T-----SEE
T ss_pred CCCEEEEEEcCCCeEEEEECCCceEEEEEecCc---------c--cceEEECCCCC-E-EEEECC------C-----CeE
Confidence 3666666654 4569999999988653 33211 1 25677777543 2 222221 1 378
Q ss_pred EEEEc--CCCceeecCCCccccceeecccceE-EE-----CceEEEEEecCCCceEEEEEeCCCcee-eEeCCCCCCCC-
Q 039662 183 AVYKF--STNSWRDLEGFEMRYDYMVDRIFNV-YL-----NGFCYWVVCRPDYSKAILSFSMSDEVF-EEMEGPSVPQS- 252 (366)
Q Consensus 183 ~vyss--~~~~W~~~~~~~~~~~~~~~~~~~v-~~-----~G~lywl~~~~~~~~~Il~fD~~~~~~-~~i~~P~~~~~- 252 (366)
.+|+. .++. .+..++.... ..++ +. +|..-+.+.. ....|..+|..+.+. ..++.+.....
T Consensus 203 ~v~D~~~~t~~--~~~~i~~g~~-----p~~va~sp~~~~dg~~l~v~~~--~~~~v~v~D~~t~~~~~~i~~~g~~~~~ 273 (543)
T 1nir_A 203 DMIDLWAKEPT--KVAEIKIGIE-----ARSVESSKFKGYEDRYTIAGAY--WPPQFAIMDGETLEPKQIVSTRGMTVDT 273 (543)
T ss_dssp EEEETTSSSCE--EEEEEECCSE-----EEEEEECCSTTCTTTEEEEEEE--ESSEEEEEETTTCCEEEEEECCEECSSS
T ss_pred EEEECcCCCCc--EEEEEecCCC-----cceEEeCCCcCCCCCEEEEEEc--cCCeEEEEeccccccceeecccCcccCc
Confidence 88888 5542 2211121111 1122 22 5654444421 134688899888665 44554321100
Q ss_pred -----CCccccccccceeeEe-cCeEEEEEeCCCCCEEEEEEeeCCeeeEEEEecCCCcceeeEEEeeCCeEEEEE--cC
Q 039662 253 -----TTYYQSVKTPWMLGTY-DDCLSLLYSDSFAHTFELWTMTGGNWTKHSTFGPFIETYQPIGFWRKGEFFLES--SD 324 (366)
Q Consensus 253 -----~~~~~~l~~~~~~~~~-~G~L~~~~~~~~~~~~~IW~l~~~~W~~~~~i~~~~~~~~~~~~~~~g~i~~~~--~~ 324 (366)
......+ ... +|...++.. .....+.+|-.....=.++.++.. ....+.+++..+|..++.. .+
T Consensus 274 ~~~~~~~~v~~i------~~s~~~~~~~vs~-~~~g~i~vvd~~~~~~l~~~~i~~-~~~~~~~~~spdg~~l~va~~~~ 345 (543)
T 1nir_A 274 QTYHPEPRVAAI------IASHEHPEFIVNV-KETGKVLLVNYKDIDNLTVTSIGA-APFLHDGGWDSSHRYFMTAANNS 345 (543)
T ss_dssp CCEESCCCEEEE------EECSSSSEEEEEE-TTTTEEEEEECTTSSSCEEEEEEC-CSSCCCEEECTTSCEEEEEEGGG
T ss_pred cccccCCceEEE------EECCCCCEEEEEE-CCCCeEEEEEecCCCcceeEEecc-CcCccCceECCCCCEEEEEecCC
Confidence 0001111 222 344444443 245566665554211122334443 2334556777788755543 36
Q ss_pred CeEEEEECCCCeEEE
Q 039662 325 KRVVLYDSTYQEMRD 339 (366)
Q Consensus 325 ~~~~~yd~~~~~~~~ 339 (366)
+.+.++|.+++++..
T Consensus 346 ~~v~v~D~~tg~l~~ 360 (543)
T 1nir_A 346 NKVAVIDSKDRRLSA 360 (543)
T ss_dssp TEEEEEETTTTEEEE
T ss_pred CeEEEEECCCCeEEE
Confidence 789999999998765
No 101
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=52.32 E-value=1.1e+02 Score=25.89 Aligned_cols=187 Identities=9% Similarity=0.026 Sum_probs=94.5
Q ss_pred ceEEEee-cCCeEEEEeCCCcceeecCCCCCCCCCcccccceeeEEeecCCCCCeEEEEEEeeecccCCCCCCcceEEEE
Q 039662 107 GIFCLLK-SHTLINLWNVSLNEYRVIPECRPRLPLYTKTHYANVALGLDPVTKDFKLVLILTLWNDHRDSFHDFSHVAVY 185 (366)
Q Consensus 107 GLl~~~~-~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~~vy 185 (366)
+.+.+.. ..+.+.++|+.|++....-.... . .. ++.++|..+ .++.... .+ -.+.++
T Consensus 10 ~~~~v~~~~~~~v~~~d~~~~~~~~~~~~~~--------~-~~-~~~~s~dg~--~l~~~~~-----~~-----~~i~~~ 67 (331)
T 3u4y_A 10 NFGIVVEQHLRRISFFSTDTLEILNQITLGY--------D-FV-DTAITSDCS--NVVVTSD-----FC-----QTLVQI 67 (331)
T ss_dssp CEEEEEEGGGTEEEEEETTTCCEEEEEECCC--------C-EE-EEEECSSSC--EEEEEES-----TT-----CEEEEE
T ss_pred CEEEEEecCCCeEEEEeCcccceeeeEEccC--------C-cc-eEEEcCCCC--EEEEEeC-----CC-----CeEEEE
Confidence 3444443 34469999999998865322221 1 12 677777544 2332222 11 277888
Q ss_pred EcCCCce--eecCCCccccceeecccc--eEEECce-EEEEEecCCCceEEEEEeCCCceeeE-eCCCCCCCCCCccccc
Q 039662 186 KFSTNSW--RDLEGFEMRYDYMVDRIF--NVYLNGF-CYWVVCRPDYSKAILSFSMSDEVFEE-MEGPSVPQSTTYYQSV 259 (366)
Q Consensus 186 ss~~~~W--~~~~~~~~~~~~~~~~~~--~v~~~G~-lywl~~~~~~~~~Il~fD~~~~~~~~-i~~P~~~~~~~~~~~l 259 (366)
+..++.- +.+ .... .... .+.-+|. +| ......+...|..+|+++.+... ++..... ..+
T Consensus 68 d~~~~~~~~~~~---~~~~----~~~~~~~~s~dg~~l~-~~~~~~~~~~i~v~d~~~~~~~~~~~~~~~~------~~~ 133 (331)
T 3u4y_A 68 ETQLEPPKVVAI---QEGQ----SSMADVDITPDDQFAV-TVTGLNHPFNMQSYSFLKNKFISTIPIPYDA------VGI 133 (331)
T ss_dssp ECSSSSCEEEEE---EECS----SCCCCEEECTTSSEEE-ECCCSSSSCEEEEEETTTTEEEEEEECCTTE------EEE
T ss_pred ECCCCceeEEec---ccCC----CCccceEECCCCCEEE-EecCCCCcccEEEEECCCCCeEEEEECCCCc------cce
Confidence 8877653 122 1100 1112 1222455 44 32111112279999998876533 3332211 122
Q ss_pred cccceeeEecCe-EEEEEeCCCCCE-EEEEEee-CCe-eeE-EEEecCCCcceeeEEEeeCCe-EEEEEc-CCeEEEEEC
Q 039662 260 KTPWMLGTYDDC-LSLLYSDSFAHT-FELWTMT-GGN-WTK-HSTFGPFIETYQPIGFWRKGE-FFLESS-DKRVVLYDS 332 (366)
Q Consensus 260 ~~~~~~~~~~G~-L~~~~~~~~~~~-~~IW~l~-~~~-W~~-~~~i~~~~~~~~~~~~~~~g~-i~~~~~-~~~~~~yd~ 332 (366)
...-+|+ |++... .... +.+|.++ ++. ... ...+.. .....-+.+..+|+ +++... ++.+..||+
T Consensus 134 -----~~spdg~~l~~~~~--~~~~~i~~~~~~~~g~~~~~~~~~~~~-~~~~~~~~~spdg~~l~v~~~~~~~v~v~d~ 205 (331)
T 3u4y_A 134 -----AISPNGNGLILIDR--SSANTVRRFKIDADGVLFDTGQEFISG-GTRPFNITFTPDGNFAFVANLIGNSIGILET 205 (331)
T ss_dssp -----EECTTSSCEEEEEE--TTTTEEEEEEECTTCCEEEEEEEEECS-SSSEEEEEECTTSSEEEEEETTTTEEEEEEC
T ss_pred -----EECCCCCEEEEEec--CCCceEEEEEECCCCcEeecCCccccC-CCCccceEECCCCCEEEEEeCCCCeEEEEEC
Confidence 1233665 555554 3345 9999988 322 211 122222 12234456667776 555543 678999999
Q ss_pred CCCeE
Q 039662 333 TYQEM 337 (366)
Q Consensus 333 ~~~~~ 337 (366)
++++.
T Consensus 206 ~~~~~ 210 (331)
T 3u4y_A 206 QNPEN 210 (331)
T ss_dssp SSTTS
T ss_pred CCCcc
Confidence 98764
No 102
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=51.97 E-value=1.3e+02 Score=26.71 Aligned_cols=70 Identities=20% Similarity=0.150 Sum_probs=43.3
Q ss_pred cCeEEEEEeCCCC-----CEEEEEEeeCCeeeEEEEecCCCcceeeEEEeeCCe-EEEEEc--CCeEEEEECCCCeEEE
Q 039662 269 DDCLSLLYSDSFA-----HTFELWTMTGGNWTKHSTFGPFIETYQPIGFWRKGE-FFLESS--DKRVVLYDSTYQEMRD 339 (366)
Q Consensus 269 ~G~L~~~~~~~~~-----~~~~IW~l~~~~W~~~~~i~~~~~~~~~~~~~~~g~-i~~~~~--~~~~~~yd~~~~~~~~ 339 (366)
+++|++....... ..=+||+.+-.....+.+|+.. ....-+.+..+|+ +++... ++.+..+|.++++...
T Consensus 278 ~~~lyV~~~~~~~~~~~~~~~~V~VID~~t~~vv~~i~~g-~~p~~i~~s~Dg~~~l~v~~~~~~~V~ViD~~t~~vv~ 355 (373)
T 2mad_H 278 SDGIYLLTSEQSAWKLHAAAKEVTSVTGLVGQTSSQISLG-HDVDAISVAQDGGPDLYALSAGTEVLHIYDAGAGDQDQ 355 (373)
T ss_pred CCEEEEEeccCCcccccCCCCeEEEEECCCCEEEEEEECC-CCcCeEEECCCCCeEEEEEcCCCCeEEEEECCCCCEEe
Confidence 3556766532111 2236899885555666667543 2234456677877 555543 7899999999977654
No 103
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=51.87 E-value=1.1e+02 Score=26.03 Aligned_cols=200 Identities=12% Similarity=0.104 Sum_probs=96.3
Q ss_pred EEEeecCCeEEEEeCCCcceeecCCCCCCCC----Cc-----c-cccceeeEEeecCCCCCeEEEEEEeeecccCCCCCC
Q 039662 109 FCLLKSHTLINLWNVSLNEYRVIPECRPRLP----LY-----T-KTHYANVALGLDPVTKDFKLVLILTLWNDHRDSFHD 178 (366)
Q Consensus 109 l~~~~~~~~~~V~NP~T~~~~~LP~~~~~~~----~~-----~-~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~~ 178 (366)
+......++++.++|.+++...+........ .+ . .......++.+|+..+ +++ +.. . .
T Consensus 33 l~v~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~p~gi~~~~~~g--~l~-v~d----~-~---- 100 (322)
T 2fp8_A 33 FYTSVQDGRVIKYEGPNSGFVDFAYASPYWNKAFCENSTDAEKRPLCGRTYDISYNLQNN--QLY-IVD----C-Y---- 100 (322)
T ss_dssp EEEECTTSEEEEECCTTTCEEEEEESCTTCCHHHHTTCCCGGGHHHHCCEEEEEEETTTT--EEE-EEE----T-T----
T ss_pred EEEEcCCCeEEEECCCCCceEEEecccccccccccccccchhccccCCCCceEEEcCCCC--cEE-EEE----C-C----
Confidence 4444445568889998877665432111000 00 0 0011236777776333 222 222 0 1
Q ss_pred cceEEEEEcCCCceeecCCCccccceeecccceEEE---CceEEEEEecC--------------CCceEEEEEeCCCcee
Q 039662 179 FSHVAVYKFSTNSWRDLEGFEMRYDYMVDRIFNVYL---NGFCYWVVCRP--------------DYSKAILSFSMSDEVF 241 (366)
Q Consensus 179 ~~~~~vyss~~~~W~~~~~~~~~~~~~~~~~~~v~~---~G~lywl~~~~--------------~~~~~Il~fD~~~~~~ 241 (366)
-.+..|+..++..+.+.... ..........+.+ +|.+|+..... .....|..+|..+.+.
T Consensus 101 -~~i~~~d~~~g~~~~~~~~~--~~~~~~~p~~i~~d~~~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~~ 177 (322)
T 2fp8_A 101 -YHLSVVGSEGGHATQLATSV--DGVPFKWLYAVTVDQRTGIVYFTDVSTLYDDRGVQQIMDTSDKTGRLIKYDPSTKET 177 (322)
T ss_dssp -TEEEEECTTCEECEEEESEE--TTEECSCEEEEEECTTTCCEEEEESCSSCCTTCHHHHHHHTCCCEEEEEEETTTTEE
T ss_pred -CCEEEEeCCCCEEEEecccC--CCCcccccceEEEecCCCEEEEECCcccccccccceehcccCCCceEEEEeCCCCEE
Confidence 13556666655554442100 0000111233444 57787764211 1135799999988776
Q ss_pred eEe----CCCCCCCCCCccccccccceeeEecCe-EEEEEeCCCCCEEEEEEeeC---CeeeEEEEecCCCcceeeEEEe
Q 039662 242 EEM----EGPSVPQSTTYYQSVKTPWMLGTYDDC-LSLLYSDSFAHTFELWTMTG---GNWTKHSTFGPFIETYQPIGFW 313 (366)
Q Consensus 242 ~~i----~~P~~~~~~~~~~~l~~~~~~~~~~G~-L~~~~~~~~~~~~~IW~l~~---~~W~~~~~i~~~~~~~~~~~~~ 313 (366)
..+ ..|.. + ...-+|+ |++... ....+.++-+++ ........ ... ..-+.+.
T Consensus 178 ~~~~~~~~~p~g---------i-----a~~~dg~~lyv~d~--~~~~I~~~~~~~~~~~~~~~~~~---~~g-P~gi~~d 237 (322)
T 2fp8_A 178 TLLLKELHVPGG---------A-----EVSADSSFVLVAEF--LSHQIVKYWLEGPKKGTAEVLVK---IPN-PGNIKRN 237 (322)
T ss_dssp EEEEEEESCCCE---------E-----EECTTSSEEEEEEG--GGTEEEEEESSSTTTTCEEEEEE---CSS-EEEEEEC
T ss_pred EEeccCCccCcc---------e-----EECCCCCEEEEEeC--CCCeEEEEECCCCcCCccceEEe---CCC-CCCeEEC
Confidence 543 22221 1 0222455 555543 234444443332 23333222 122 3334555
Q ss_pred eCCeEEEEEcC-----------CeEEEEECCCCeEEEEEEe
Q 039662 314 RKGEFFLESSD-----------KRVVLYDSTYQEMRDIRIT 343 (366)
Q Consensus 314 ~~g~i~~~~~~-----------~~~~~yd~~~~~~~~i~~~ 343 (366)
.+|.+++.... ..+..||++.+.++.+...
T Consensus 238 ~~G~l~va~~~~~~~~~~~~~~~~v~~~d~~G~~~~~~~~~ 278 (322)
T 2fp8_A 238 ADGHFWVSSSEELDGNMHGRVDPKGIKFDEFGNILEVIPLP 278 (322)
T ss_dssp TTSCEEEEEEEETTSSTTSCEEEEEEEECTTSCEEEEEECC
T ss_pred CCCCEEEEecCcccccccCCCccEEEEECCCCCEEEEEECC
Confidence 66788877543 5699999987777776643
No 104
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=49.82 E-value=1.2e+02 Score=25.79 Aligned_cols=108 Identities=8% Similarity=-0.033 Sum_probs=62.1
Q ss_pred ECceEEEEEecCCCceEEEEEeCCCcee-eEeCCCCCCCCCCccccccccceeeEecCeEEEEEeCCCCCEEEEEEeeCC
Q 039662 214 LNGFCYWVVCRPDYSKAILSFSMSDEVF-EEMEGPSVPQSTTYYQSVKTPWMLGTYDDCLSLLYSDSFAHTFELWTMTGG 292 (366)
Q Consensus 214 ~~G~lywl~~~~~~~~~Il~fD~~~~~~-~~i~~P~~~~~~~~~~~l~~~~~~~~~~G~L~~~~~~~~~~~~~IW~l~~~ 292 (366)
.+|.+|--+. . ...|..+|+++++. ..+ +|+.. +. -.+ ...+++|+++.- ... .+|+.+-.
T Consensus 63 ~~~~Ly~stG--~-~g~v~~iD~~Tgkv~~~~-l~~~~---Fg-eGi------t~~g~~Ly~ltw--~~~--~v~V~D~~ 124 (268)
T 3nok_A 63 HQGHFFESTG--H-QGTLRQLSLESAQPVWME-RLGNI---FA-EGL------ASDGERLYQLTW--TEG--LLFTWSGM 124 (268)
T ss_dssp ETTEEEEEET--T-TTEEEECCSSCSSCSEEE-ECTTC---CE-EEE------EECSSCEEEEES--SSC--EEEEEETT
T ss_pred ECCEEEEEcC--C-CCEEEEEECCCCcEEeEE-CCCCc---ce-eEE------EEeCCEEEEEEc--cCC--EEEEEECC
Confidence 4566776652 2 22499999999876 445 66532 10 124 555778887754 222 45666622
Q ss_pred eeeEEEEecCCCcceeeEEEeeCCe-EEEEEcCCeEEEEECCCCeE-EEEEE
Q 039662 293 NWTKHSTFGPFIETYQPIGFWRKGE-FFLESSDKRVVLYDSTYQEM-RDIRI 342 (366)
Q Consensus 293 ~W~~~~~i~~~~~~~~~~~~~~~g~-i~~~~~~~~~~~yd~~~~~~-~~i~~ 342 (366)
+-..+.+++... ...++..+++ +++...+..+..+|++|.+. .+|.+
T Consensus 125 Tl~~~~ti~~~~---eGwGLt~Dg~~L~vSdGs~~l~~iDp~T~~v~~~I~V 173 (268)
T 3nok_A 125 PPQRERTTRYSG---EGWGLCYWNGKLVRSDGGTMLTFHEPDGFALVGAVQV 173 (268)
T ss_dssp TTEEEEEEECSS---CCCCEEEETTEEEEECSSSEEEEECTTTCCEEEEEEC
T ss_pred cCcEEEEEeCCC---ceeEEecCCCEEEEECCCCEEEEEcCCCCeEEEEEEe
Confidence 334445555421 1234444554 55555588999999999654 44554
No 105
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=49.42 E-value=1.2e+02 Score=25.69 Aligned_cols=55 Identities=15% Similarity=0.309 Sum_probs=33.3
Q ss_pred CCCEEEEEEee-CCeeeEEEEecCCCcceeeEEEeeCC----eEEE-EEcCCeEEEEECCC
Q 039662 280 FAHTFELWTMT-GGNWTKHSTFGPFIETYQPIGFWRKG----EFFL-ESSDKRVVLYDSTY 334 (366)
Q Consensus 280 ~~~~~~IW~l~-~~~W~~~~~i~~~~~~~~~~~~~~~g----~i~~-~~~~~~~~~yd~~~ 334 (366)
....+.||-+. +..|.....+........-+.+..++ ..+. ...++.+..||+++
T Consensus 187 ~D~~v~lWd~~~~~~~~~~~~l~~h~~~V~~v~~sp~~~~~~~~las~s~D~~v~iw~~~~ 247 (316)
T 3bg1_A 187 CDNLIKLWKEEEDGQWKEEQKLEAHSDWVRDVAWAPSIGLPTSTIASCSQDGRVFIWTCDD 247 (316)
T ss_dssp TTSBCCEEEECTTSCEEEEECCBCCSSCEEEEECCCCSSCSCCEEEEEETTCEEEEEECSS
T ss_pred CCCeEEEEEeCCCCccceeeecccCCCceEEEEecCCCCCCCceEEEEcCCCeEEEEEccC
Confidence 45789999887 46677666554322222334444443 4443 44588899999876
No 106
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=48.83 E-value=1.9e+02 Score=27.89 Aligned_cols=189 Identities=12% Similarity=0.024 Sum_probs=92.8
Q ss_pred EEEEeCCCccee--ecCCCCCCCCCcccccceeeEEeecCCCCCeEEEEEEeeecccCCCCCCcceEEEEEcCCCceeec
Q 039662 118 INLWNVSLNEYR--VIPECRPRLPLYTKTHYANVALGLDPVTKDFKLVLILTLWNDHRDSFHDFSHVAVYKFSTNSWRDL 195 (366)
Q Consensus 118 ~~V~NP~T~~~~--~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~~vyss~~~~W~~~ 195 (366)
+++++.-|++.. .+-..+. ......+..+.|.. .|-++.... .. ....+.+.+..++.|+.+
T Consensus 204 v~~~~l~t~~~~~~lv~~~~~-------~~~~~~~~~~SpDG-~~l~~~~~~------~~--~~~~l~~~~~~~~~~~~l 267 (695)
T 2bkl_A 204 IRYHTLGTEPSKDTVVHERTG-------DPTTFLQSDLSRDG-KYLFVYILR------GW--SENDVYWKRPGEKDFRLL 267 (695)
T ss_dssp EEEEETTSCGGGCEEEECCCC-------CTTCEEEEEECTTS-CCEEEEEEE------TT--TEEEEEEECTTCSSCEEE
T ss_pred EEEEECCCCchhceEEEecCC-------CCEEEEEEEECCCC-CEEEEEEeC------CC--CceEEEEEcCCCCceEEe
Confidence 888888877632 2222111 01122455566543 444443322 10 122344445556678776
Q ss_pred CCCccccceeecccceEEECceEEEEEecCCCceEEEEEeCCCce---eeEeCCCCCCCCCCccccccccceeeEecCeE
Q 039662 196 EGFEMRYDYMVDRIFNVYLNGFCYWVVCRPDYSKAILSFSMSDEV---FEEMEGPSVPQSTTYYQSVKTPWMLGTYDDCL 272 (366)
Q Consensus 196 ~~~~~~~~~~~~~~~~v~~~G~lywl~~~~~~~~~Il~fD~~~~~---~~~i~~P~~~~~~~~~~~l~~~~~~~~~~G~L 272 (366)
. ..... ....+..+|.+|..+........|+.+|+++.. |..+-.+... .....+ ...+|.|
T Consensus 268 ~---~~~~~---~~~~~~~~g~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~---~~l~~~------~~~~~~l 332 (695)
T 2bkl_A 268 V---KGVGA---KYEVHAWKDRFYVLTDEGAPRQRVFEVDPAKPARASWKEIVPEDSS---ASLLSV------SIVGGHL 332 (695)
T ss_dssp E---ECSSC---CEEEEEETTEEEEEECTTCTTCEEEEEBTTBCSGGGCEEEECCCSS---CEEEEE------EEETTEE
T ss_pred e---cCCCc---eEEEEecCCcEEEEECCCCCCCEEEEEeCCCCCccCCeEEecCCCC---CeEEEE------EEECCEE
Confidence 3 11111 122334566666665222235789999997754 5554322211 011122 3348888
Q ss_pred EEEEeCCCCCEEEEEEee-CCeeeEEEEecCC-CcceeeEEEeeCC-eEEEEEc----CCeEEEEECCCCeEEEEE
Q 039662 273 SLLYSDSFAHTFELWTMT-GGNWTKHSTFGPF-IETYQPIGFWRKG-EFFLESS----DKRVVLYDSTYQEMRDIR 341 (366)
Q Consensus 273 ~~~~~~~~~~~~~IW~l~-~~~W~~~~~i~~~-~~~~~~~~~~~~g-~i~~~~~----~~~~~~yd~~~~~~~~i~ 341 (366)
.+... ......||+++ ++. ....+... ......+.+..++ .+++... ...++.||+.+++.+.+.
T Consensus 333 v~~~~--~dg~~~l~~~~~~g~--~~~~l~~~~~~~v~~~~~s~d~~~l~~~~ss~~~P~~v~~~d~~~g~~~~l~ 404 (695)
T 2bkl_A 333 SLEYL--KDATSEVRVATLKGK--PVRTVQLPGVGAASNLMGLEDLDDAYYVFTSFTTPRQIYKTSVSTGKSELWA 404 (695)
T ss_dssp EEEEE--ETTEEEEEEEETTCC--EEEECCCSSSSEECCCBSCTTCSEEEEEEEETTEEEEEEEEETTTCCEEEEE
T ss_pred EEEEE--ECCEEEEEEEeCCCC--eeEEecCCCCeEEEEeecCCCCCEEEEEEcCCCCCCEEEEEECCCCcEEEEe
Confidence 77765 34577889887 321 23334321 1111112222344 4544432 357999999988776553
No 107
>1egx_A VAsp, vasodilator-stimulated phosphoprotein; EVH1, VAsp-ENA, poly-proline-binding domain, signaling protein; NMR {Homo sapiens} SCOP: b.55.1.4
Probab=48.39 E-value=32 Score=25.13 Aligned_cols=42 Identities=14% Similarity=0.276 Sum_probs=29.4
Q ss_pred EEEEeCCCcceeecCCCCCCCCCcccccceeeEEeecCCCCCeEEEEEEe
Q 039662 118 INLWNVSLNEYRVIPECRPRLPLYTKTHYANVALGLDPVTKDFKLVLILT 167 (366)
Q Consensus 118 ~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~ 167 (366)
+++.+|.|++|. |..... .....+.+..|...+.|.|+...-
T Consensus 13 V~~~d~~~~~W~--p~~~g~------~gvs~V~~~~d~~~~~yrI~~~~l 54 (115)
T 1egx_A 13 VMLYDDGNKRWL--PAGTGP------QAFSRVQIYHNPTANSFRVVGRKM 54 (115)
T ss_dssp CBEECTTTSSCC--BSSCSC------CCCEEEEEEEETTTTEEEEEEEES
T ss_pred EEEEcCCCCcee--ECCCCC------CCccEEEEEEeCCCCEEEEEEEEc
Confidence 788899999964 544310 122347788898888999998753
No 108
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=48.38 E-value=1.3e+02 Score=25.57 Aligned_cols=205 Identities=13% Similarity=0.057 Sum_probs=101.6
Q ss_pred eecceEEEee-cCCeEEEEeCCCcceeecCCCCCCCCCcccccceeeEEeecCCCCCeEEEEEEeeecccCCCCCCcceE
Q 039662 104 PYDGIFCLLK-SHTLINLWNVSLNEYRVIPECRPRLPLYTKTHYANVALGLDPVTKDFKLVLILTLWNDHRDSFHDFSHV 182 (366)
Q Consensus 104 s~~GLl~~~~-~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~ 182 (366)
+.+|-|.+.. ....++++||.+++...+..... ....++.+++..+ ++.... .+ ....-.+
T Consensus 53 ~~~g~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~---------~~~~~i~~~~dg~---l~v~~~-----~~-~~~~~~i 114 (333)
T 2dg1_A 53 DRQGQLFLLDVFEGNIFKINPETKEIKRPFVSHK---------ANPAAIKIHKDGR---LFVCYL-----GD-FKSTGGI 114 (333)
T ss_dssp CTTSCEEEEETTTCEEEEECTTTCCEEEEEECSS---------SSEEEEEECTTSC---EEEEEC-----TT-SSSCCEE
T ss_pred CCCCCEEEEECCCCEEEEEeCCCCcEEEEeeCCC---------CCcceEEECCCCc---EEEEeC-----CC-CCCCceE
Confidence 3466666544 34569999999998876542111 1235677776532 222221 01 0011356
Q ss_pred EEEEcCCCceeecCCCccccceeecccceEEE--CceEEEEEecC---CCceEEEEEeCCCceeeEeCCCCCCCCCCccc
Q 039662 183 AVYKFSTNSWRDLEGFEMRYDYMVDRIFNVYL--NGFCYWVVCRP---DYSKAILSFSMSDEVFEEMEGPSVPQSTTYYQ 257 (366)
Q Consensus 183 ~vyss~~~~W~~~~~~~~~~~~~~~~~~~v~~--~G~lywl~~~~---~~~~~Il~fD~~~~~~~~i~~P~~~~~~~~~~ 257 (366)
.+|+..++.-+..-. ..... .....+.+ +|.+|...... .....|..+|.+++++..+.- ... ...
T Consensus 115 ~~~d~~~~~~~~~~~-~~~~~---~~~~~i~~d~~g~l~v~~~~~~~~~~~~~l~~~~~~~~~~~~~~~--~~~---~~~ 185 (333)
T 2dg1_A 115 FAATENGDNLQDIIE-DLSTA---YCIDDMVFDSKGGFYFTDFRGYSTNPLGGVYYVSPDFRTVTPIIQ--NIS---VAN 185 (333)
T ss_dssp EEECTTSCSCEEEEC-SSSSC---CCEEEEEECTTSCEEEEECCCBTTBCCEEEEEECTTSCCEEEEEE--EES---SEE
T ss_pred EEEeCCCCEEEEEEc-cCccC---CcccceEECCCCCEEEEeccccccCCCceEEEEeCCCCEEEEeec--CCC---ccc
Confidence 777777665442200 00000 01122222 57766654210 113579999988776654421 000 001
Q ss_pred cccccceeeEecCe-EEEEEeCCCCCEEEEEEee--CCeeeEEE-Ee--cCCC-cceeeEEEeeCCeEEEEEc-CCeEEE
Q 039662 258 SVKTPWMLGTYDDC-LSLLYSDSFAHTFELWTMT--GGNWTKHS-TF--GPFI-ETYQPIGFWRKGEFFLESS-DKRVVL 329 (366)
Q Consensus 258 ~l~~~~~~~~~~G~-L~~~~~~~~~~~~~IW~l~--~~~W~~~~-~i--~~~~-~~~~~~~~~~~g~i~~~~~-~~~~~~ 329 (366)
.+ ...-+|+ |++... ....+.+|-++ +....... .+ .... ....-+.+..+|.+++... ++.+..
T Consensus 186 ~i-----~~~~dg~~l~v~~~--~~~~i~~~d~~~~g~~~~~~~~~~~~~~~~~~~~~~i~~d~~G~l~v~~~~~~~v~~ 258 (333)
T 2dg1_A 186 GI-----ALSTDEKVLWVTET--TANRLHRIALEDDGVTIQPFGATIPYYFTGHEGPDSCCIDSDDNLYVAMYGQGRVLV 258 (333)
T ss_dssp EE-----EECTTSSEEEEEEG--GGTEEEEEEECTTSSSEEEEEEEEEEECCSSSEEEEEEEBTTCCEEEEEETTTEEEE
T ss_pred ce-----EECCCCCEEEEEeC--CCCeEEEEEecCCCcCcccccceEEEecCCCCCCCceEECCCCCEEEEEcCCCEEEE
Confidence 11 0223555 655543 34567777664 22222111 11 1111 1223355566788887754 578999
Q ss_pred EECCCCeEEEEEE
Q 039662 330 YDSTYQEMRDIRI 342 (366)
Q Consensus 330 yd~~~~~~~~i~~ 342 (366)
||++.+.+..+..
T Consensus 259 ~d~~g~~~~~~~~ 271 (333)
T 2dg1_A 259 FNKRGYPIGQILI 271 (333)
T ss_dssp ECTTSCEEEEEEC
T ss_pred ECCCCCEEEEEEc
Confidence 9998777777654
No 109
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=47.78 E-value=1.4e+02 Score=25.77 Aligned_cols=62 Identities=19% Similarity=0.279 Sum_probs=38.6
Q ss_pred cCeEEEEEeCCCCCEEEEEEeeCCeeeEEEEecCCCcceeeEEEeeCCeEEEE-EcCCeEEEEEC
Q 039662 269 DDCLSLLYSDSFAHTFELWTMTGGNWTKHSTFGPFIETYQPIGFWRKGEFFLE-SSDKRVVLYDS 332 (366)
Q Consensus 269 ~G~L~~~~~~~~~~~~~IW~l~~~~W~~~~~i~~~~~~~~~~~~~~~g~i~~~-~~~~~~~~yd~ 332 (366)
+|.+.+... ....+.||-+....|....++........-+.+..+|..++. ..++.+..||.
T Consensus 161 ~~~~l~s~s--~d~~i~~w~~~~~~~~~~~~~~~h~~~v~~l~~sp~g~~l~s~s~D~~v~iW~~ 223 (345)
T 3fm0_A 161 SQELLASAS--YDDTVKLYREEEDDWVCCATLEGHESTVWSLAFDPSGQRLASCSDDRTVRIWRQ 223 (345)
T ss_dssp SSSCEEEEE--TTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEE
T ss_pred CCCEEEEEe--CCCcEEEEEecCCCEEEEEEecCCCCceEEEEECCCCCEEEEEeCCCeEEEecc
Confidence 455444443 456899998876777776666543333344555667765554 44777888874
No 110
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=46.97 E-value=1.4e+02 Score=25.82 Aligned_cols=189 Identities=11% Similarity=0.034 Sum_probs=96.3
Q ss_pred cceEEEeec-CCeEEEEeCCCcceeecCCCCCCCCCcccccceeeEEeecCCCCCeEEEEEEeeecccCCCCCCcceEEE
Q 039662 106 DGIFCLLKS-HTLINLWNVSLNEYRVIPECRPRLPLYTKTHYANVALGLDPVTKDFKLVLILTLWNDHRDSFHDFSHVAV 184 (366)
Q Consensus 106 ~GLl~~~~~-~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~~v 184 (366)
+..|.+... ++.+.++|+.+++....-.... ...++.+++..+ +-++. .. .+ -.+.+
T Consensus 85 g~~l~~~~~~~~~v~v~d~~~~~~~~~~~~~~----------~~~~~~~s~dg~-~l~~~-~~-----~~-----~~v~~ 142 (391)
T 1l0q_A 85 GKQVYVTNMASSTLSVIDTTSNTVAGTVKTGK----------SPLGLALSPDGK-KLYVT-NN-----GD-----KTVSV 142 (391)
T ss_dssp SSEEEEEETTTTEEEEEETTTTEEEEEEECSS----------SEEEEEECTTSS-EEEEE-ET-----TT-----TEEEE
T ss_pred CCEEEEEECCCCEEEEEECCCCeEEEEEeCCC----------CcceEEECCCCC-EEEEE-eC-----CC-----CEEEE
Confidence 334444443 3569999999988765432221 125666766532 22222 21 12 27788
Q ss_pred EEcCCCceeecCCCccccceeecccceEEE--CceEEEEEecCCCceEEEEEeCCCceeeE-eCCCCCCCCCCccccccc
Q 039662 185 YKFSTNSWRDLEGFEMRYDYMVDRIFNVYL--NGFCYWVVCRPDYSKAILSFSMSDEVFEE-MEGPSVPQSTTYYQSVKT 261 (366)
Q Consensus 185 yss~~~~W~~~~~~~~~~~~~~~~~~~v~~--~G~lywl~~~~~~~~~Il~fD~~~~~~~~-i~~P~~~~~~~~~~~l~~ 261 (366)
|+..++.....- ..... ...+.+ +|..-+++.. ....|..+|+.+.+... +.... ....+
T Consensus 143 ~d~~~~~~~~~~--~~~~~-----~~~~~~~~dg~~l~~~~~--~~~~v~~~d~~~~~~~~~~~~~~------~~~~~-- 205 (391)
T 1l0q_A 143 INTVTKAVINTV--SVGRS-----PKGIAVTPDGTKVYVANF--DSMSISVIDTVTNSVIDTVKVEA------APSGI-- 205 (391)
T ss_dssp EETTTTEEEEEE--ECCSS-----EEEEEECTTSSEEEEEET--TTTEEEEEETTTTEEEEEEECSS------EEEEE--
T ss_pred EECCCCcEEEEE--ecCCC-----cceEEECCCCCEEEEEeC--CCCEEEEEECCCCeEEEEEecCC------Cccce--
Confidence 888877544331 11100 112222 4544344422 23468999998876533 33211 11111
Q ss_pred cceeeEecCe-EEEEEeCCCCCEEEEEEeeCCeeeEEEEecCCCcceeeEEEeeCCeEE-EEE-cCCeEEEEECCCCeEE
Q 039662 262 PWMLGTYDDC-LSLLYSDSFAHTFELWTMTGGNWTKHSTFGPFIETYQPIGFWRKGEFF-LES-SDKRVVLYDSTYQEMR 338 (366)
Q Consensus 262 ~~~~~~~~G~-L~~~~~~~~~~~~~IW~l~~~~W~~~~~i~~~~~~~~~~~~~~~g~i~-~~~-~~~~~~~yd~~~~~~~ 338 (366)
...-+|+ |++...+.....+.+|-++.. ..+..+..... ..-+.+..+|+.+ +.. .++.+..||++++++.
T Consensus 206 ---~~~~~g~~l~~~~~~~~~~~v~~~d~~~~--~~~~~~~~~~~-~~~~~~s~dg~~l~~s~~~d~~v~v~d~~~~~~~ 279 (391)
T 1l0q_A 206 ---AVNPEGTKAYVTNVDKYFNTVSMIDTGTN--KITARIPVGPD-PAGIAVTPDGKKVYVALSFXNTVSVIDTATNTIT 279 (391)
T ss_dssp ---EECTTSSEEEEEEECSSCCEEEEEETTTT--EEEEEEECCSS-EEEEEECTTSSEEEEEETTTTEEEEEETTTTEEE
T ss_pred ---EECCCCCEEEEEecCcCCCcEEEEECCCC--eEEEEEecCCC-ccEEEEccCCCEEEEEcCCCCEEEEEECCCCcEE
Confidence 0222455 444443224578888876632 22333433222 2334556677644 443 4789999999998765
Q ss_pred E
Q 039662 339 D 339 (366)
Q Consensus 339 ~ 339 (366)
.
T Consensus 280 ~ 280 (391)
T 1l0q_A 280 A 280 (391)
T ss_dssp E
T ss_pred E
Confidence 4
No 111
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=46.75 E-value=1.5e+02 Score=26.03 Aligned_cols=190 Identities=9% Similarity=0.060 Sum_probs=94.6
Q ss_pred cceEEEeecCCeEEEEeCCCcceeecCCCCCCCCCcccccceeeEEeecCCCCCeEEEEEEeeecccCCCCCCcceEEEE
Q 039662 106 DGIFCLLKSHTLINLWNVSLNEYRVIPECRPRLPLYTKTHYANVALGLDPVTKDFKLVLILTLWNDHRDSFHDFSHVAVY 185 (366)
Q Consensus 106 ~GLl~~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~~vy 185 (366)
++.++....++.+.|||..|++...+-.... ......+.+.|.. .+ +.... .+ -.+.+|
T Consensus 103 ~~~l~~~~~d~~v~lw~~~~~~~~~~~~~~~--------~~~v~~v~~s~~~-~~--l~~~~-----~d-----g~i~iw 161 (401)
T 4aez_A 103 NLNVVAVALERNVYVWNADSGSVSALAETDE--------STYVASVKWSHDG-SF--LSVGL-----GN-----GLVDIY 161 (401)
T ss_dssp TTSEEEEEETTEEEEEETTTCCEEEEEECCT--------TCCEEEEEECTTS-SE--EEEEE-----TT-----SCEEEE
T ss_pred CCCEEEEECCCeEEEeeCCCCcEeEeeecCC--------CCCEEEEEECCCC-CE--EEEEC-----CC-----CeEEEE
Confidence 3444444455569999999998776543321 1123567777643 22 33332 02 267889
Q ss_pred EcCCCceeecCCCccccceeecccceEEECceEEEEEecCCCceEEEEEeCCCcee--eEeCCCCCCCCCCccccccccc
Q 039662 186 KFSTNSWRDLEGFEMRYDYMVDRIFNVYLNGFCYWVVCRPDYSKAILSFSMSDEVF--EEMEGPSVPQSTTYYQSVKTPW 263 (366)
Q Consensus 186 ss~~~~W~~~~~~~~~~~~~~~~~~~v~~~G~lywl~~~~~~~~~Il~fD~~~~~~--~~i~~P~~~~~~~~~~~l~~~~ 263 (366)
+..++.-... +... ......+..+|.+...+. . ...|..+|+....- ..+..... ....+
T Consensus 162 d~~~~~~~~~--~~~~----~~~v~~~~~~~~~l~~~~-~--dg~i~i~d~~~~~~~~~~~~~~~~-----~v~~~---- 223 (401)
T 4aez_A 162 DVESQTKLRT--MAGH----QARVGCLSWNRHVLSSGS-R--SGAIHHHDVRIANHQIGTLQGHSS-----EVCGL---- 223 (401)
T ss_dssp ETTTCCEEEE--ECCC----SSCEEEEEEETTEEEEEE-T--TSEEEEEETTSSSCEEEEEECCSS-----CEEEE----
T ss_pred ECcCCeEEEE--ecCC----CCceEEEEECCCEEEEEc-C--CCCEEEEecccCcceeeEEcCCCC-----CeeEE----
Confidence 8877643221 0111 111233444665444432 2 34688899884322 22221111 11122
Q ss_pred eeeEecCeEEEEEeCCCCCEEEEEEeeCCeeeEEEEecCCCcceeeEEEeeCC-eEEEEE---cCCeEEEEECCCCeEEE
Q 039662 264 MLGTYDDCLSLLYSDSFAHTFELWTMTGGNWTKHSTFGPFIETYQPIGFWRKG-EFFLES---SDKRVVLYDSTYQEMRD 339 (366)
Q Consensus 264 ~~~~~~G~L~~~~~~~~~~~~~IW~l~~~~W~~~~~i~~~~~~~~~~~~~~~g-~i~~~~---~~~~~~~yd~~~~~~~~ 339 (366)
...-+|.+.+... ....+.||-+... .....+........-+.+..++ .++... .++.+..||+++++...
T Consensus 224 -~~~~~~~~l~s~~--~d~~v~iwd~~~~--~~~~~~~~~~~~v~~~~~~p~~~~ll~~~~gs~d~~i~i~d~~~~~~~~ 298 (401)
T 4aez_A 224 -AWRSDGLQLASGG--NDNVVQIWDARSS--IPKFTKTNHNAAVKAVAWCPWQSNLLATGGGTMDKQIHFWNAATGARVN 298 (401)
T ss_dssp -EECTTSSEEEEEE--TTSCEEEEETTCS--SEEEEECCCSSCCCEEEECTTSTTEEEEECCTTTCEEEEEETTTCCEEE
T ss_pred -EEcCCCCEEEEEe--CCCeEEEccCCCC--CccEEecCCcceEEEEEECCCCCCEEEEecCCCCCEEEEEECCCCCEEE
Confidence 0112565555544 4568899977621 1222333222222334445544 455543 37889999988876543
No 112
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=46.29 E-value=1.6e+02 Score=26.17 Aligned_cols=104 Identities=8% Similarity=0.068 Sum_probs=56.6
Q ss_pred cceEEEeecCCeEEEEeCCCcceeecCCCCCCCCCcccccceeeEEeecCCCCCeEEEEEEeeecccCCCCCCcceEEEE
Q 039662 106 DGIFCLLKSHTLINLWNVSLNEYRVIPECRPRLPLYTKTHYANVALGLDPVTKDFKLVLILTLWNDHRDSFHDFSHVAVY 185 (366)
Q Consensus 106 ~GLl~~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~~vy 185 (366)
.+.|++..... +...++.+++...+-... ....++.+|+..+ +|+.... ..-.+..+
T Consensus 87 ~~~l~~~~~~~-I~~i~~~~~~~~~~~~~~----------~~~~gl~~d~~~~--~ly~~D~----------~~~~I~r~ 143 (386)
T 3v65_B 87 EPVLLFANRID-IRQVLPHRSEYTLLLNNL----------ENAIALDFHHRRE--LVFWSDV----------TLDRILRA 143 (386)
T ss_dssp CCEEEEECBSC-EEEECTTSCCCEEEECSC----------SCEEEEEEETTTT--EEEEEET----------TTTEEEEE
T ss_pred cceeEeecCcc-ceeeccCCCcEEEEecCC----------CccEEEEEecCCC--eEEEEeC----------CCCcEEEE
Confidence 56666665555 777777766655443221 1237888887654 3333322 11256667
Q ss_pred EcCCCceeecCCCccccceeecccceEE---ECceEEEEEecCCCceEEEEEeCCCcee
Q 039662 186 KFSTNSWRDLEGFEMRYDYMVDRIFNVY---LNGFCYWVVCRPDYSKAILSFSMSDEVF 241 (366)
Q Consensus 186 ss~~~~W~~~~~~~~~~~~~~~~~~~v~---~~G~lywl~~~~~~~~~Il~fD~~~~~~ 241 (366)
+..++..+.+..... ....++. .+|.+||.- .+...|..+|++...-
T Consensus 144 ~~~g~~~~~~~~~~~------~~p~glavd~~~g~lY~~d---~~~~~I~~~~~dg~~~ 193 (386)
T 3v65_B 144 NLNGSNVEEVVSTGL------ESPGGLAVDWVHDKLYWTD---SGTSRIEVANLDGAHR 193 (386)
T ss_dssp ETTSCCEEEEECSSC------SCCCCEEEETTTTEEEEEE---TTTTEEEECBTTSCSC
T ss_pred ecCCCCcEEEEeCCC------CCccEEEEEeCCCeEEEEc---CCCCeEEEEeCCCCce
Confidence 766665544311011 0112333 368999985 2345799999876543
No 113
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=46.07 E-value=2e+02 Score=28.22 Aligned_cols=64 Identities=16% Similarity=0.334 Sum_probs=42.1
Q ss_pred CeEEEEEeCCCCCEEEEEEeeCCeeeEEEEecCCCcceeeEEEeeC--CeEEE-EEcCCeEEEEECCCC
Q 039662 270 DCLSLLYSDSFAHTFELWTMTGGNWTKHSTFGPFIETYQPIGFWRK--GEFFL-ESSDKRVVLYDSTYQ 335 (366)
Q Consensus 270 G~L~~~~~~~~~~~~~IW~l~~~~W~~~~~i~~~~~~~~~~~~~~~--g~i~~-~~~~~~~~~yd~~~~ 335 (366)
|.+.+... ....+.||-+++..|.....+........-+.+..+ +.+++ ...++.+..||++++
T Consensus 67 ~~~l~s~s--~Dg~I~vwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~l~sgs~dg~I~vwdl~~~ 133 (753)
T 3jro_A 67 GTILASCS--YDGKVLIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKEN 133 (753)
T ss_dssp CSEEEEEE--TTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCSS
T ss_pred CCEEEEEe--CCCeEEEEECCCCcccccccccCCCCCeEEEEECCCCCCCEEEEEeCCCcEEEEEeecC
Confidence 55555544 457899999887677777766643333334445555 65554 455889999999887
No 114
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=45.74 E-value=1.4e+02 Score=25.43 Aligned_cols=68 Identities=15% Similarity=0.076 Sum_probs=36.9
Q ss_pred cCeEEEEEeCCCCCEEEEEEee-C--------Cee-------eEEEEecCCCcceeeEEEeeCCeEEE-EEcCCeEEEEE
Q 039662 269 DDCLSLLYSDSFAHTFELWTMT-G--------GNW-------TKHSTFGPFIETYQPIGFWRKGEFFL-ESSDKRVVLYD 331 (366)
Q Consensus 269 ~G~L~~~~~~~~~~~~~IW~l~-~--------~~W-------~~~~~i~~~~~~~~~~~~~~~g~i~~-~~~~~~~~~yd 331 (366)
+|.+.+... ....+.+|-+. . ..| .....+........-+.+..++..++ ...++.+..||
T Consensus 153 ~~~~l~~~~--~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d 230 (372)
T 1k8k_C 153 NSVLLAAGS--CDFKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSSCGWVHGVCFSANGSRVAWVSHDSTVCLAD 230 (372)
T ss_dssp TSSEEEEEE--TTSCEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECCCCSSCEEEEEECSSSSEEEEEETTTEEEEEE
T ss_pred CCCEEEEEc--CCCCEEEEEcccccccccccccccccccchhhheEecCCCCCeEEEEEECCCCCEEEEEeCCCEEEEEE
Confidence 555544444 45688899753 0 112 22333322222223445556665554 45588899999
Q ss_pred CCCCeEE
Q 039662 332 STYQEMR 338 (366)
Q Consensus 332 ~~~~~~~ 338 (366)
+++++..
T Consensus 231 ~~~~~~~ 237 (372)
T 1k8k_C 231 ADKKMAV 237 (372)
T ss_dssp GGGTTEE
T ss_pred CCCCcee
Confidence 9876543
No 115
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=42.75 E-value=1.7e+02 Score=25.47 Aligned_cols=64 Identities=17% Similarity=0.153 Sum_probs=37.5
Q ss_pred cCeEEEEEeCCCCCEEEEEEeeCCeeeEEEEecCCCcceeeEEEeeCC-eEEEEE-cCCeEEEEECCCCe
Q 039662 269 DDCLSLLYSDSFAHTFELWTMTGGNWTKHSTFGPFIETYQPIGFWRKG-EFFLES-SDKRVVLYDSTYQE 336 (366)
Q Consensus 269 ~G~L~~~~~~~~~~~~~IW~l~~~~W~~~~~i~~~~~~~~~~~~~~~g-~i~~~~-~~~~~~~yd~~~~~ 336 (366)
+|.+.+... ....+.||-++.. ..+..+........-+.+..++ .+++.. .++.+..||+++..
T Consensus 274 ~~~~l~s~~--~dg~v~~wd~~~~--~~~~~~~~~~~~v~~~~~s~~~~~~l~s~~~d~~i~iw~~~~~~ 339 (416)
T 2pm9_A 274 DEHLLLSSG--RDNTVLLWNPESA--EQLSQFPARGNWCFKTKFAPEAPDLFACASFDNKIEVQTLQNLT 339 (416)
T ss_dssp CSSCEEEEE--SSSEEEEECSSSC--CEEEEEECSSSCCCCEEECTTCTTEEEECCSSSEEEEEESCCCC
T ss_pred CCCeEEEEe--CCCCEEEeeCCCC--ccceeecCCCCceEEEEECCCCCCEEEEEecCCcEEEEEccCCC
Confidence 566555554 4578999987622 2333333222222335556666 565554 47889999998764
No 116
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=40.99 E-value=88 Score=26.48 Aligned_cols=110 Identities=6% Similarity=-0.037 Sum_probs=55.7
Q ss_pred Cce-EEEEEecCCCceEEEEEeCCCceeeEeCCCCCCCCCCccccccccceeeEecCeEEEEEeCCCCCEEEEEEeeCCe
Q 039662 215 NGF-CYWVVCRPDYSKAILSFSMSDEVFEEMEGPSVPQSTTYYQSVKTPWMLGTYDDCLSLLYSDSFAHTFELWTMTGGN 293 (366)
Q Consensus 215 ~G~-lywl~~~~~~~~~Il~fD~~~~~~~~i~~P~~~~~~~~~~~l~~~~~~~~~~G~L~~~~~~~~~~~~~IW~l~~~~ 293 (366)
+|. +||... ....|..+|.. ++.+.+..|... ...+ ...-+|+|.++.. ....+.+|-.+ ++
T Consensus 55 ~g~~l~~~d~---~~~~i~~~~~~-g~~~~~~~~~~~-----~~gl-----~~d~dG~l~v~~~--~~~~v~~~~~~-g~ 117 (305)
T 3dr2_A 55 AQRTLVWSDL---VGRRVLGWRED-GTVDVLLDATAF-----TNGN-----AVDAQQRLVHCEH--GRRAITRSDAD-GQ 117 (305)
T ss_dssp GGTEEEEEET---TTTEEEEEETT-SCEEEEEESCSC-----EEEE-----EECTTSCEEEEET--TTTEEEEECTT-SC
T ss_pred CCCEEEEEEC---CCCEEEEEeCC-CCEEEEeCCCCc-----ccee-----eECCCCCEEEEEC--CCCEEEEECCC-CC
Confidence 454 899852 23468899984 445555444321 1112 0223677665543 23444444333 22
Q ss_pred eeEEEEecCCC--cceeeEEEeeCCeEEEEE------------------cCCeEEEEECCCCeEEEEE
Q 039662 294 WTKHSTFGPFI--ETYQPIGFWRKGEFFLES------------------SDKRVVLYDSTYQEMRDIR 341 (366)
Q Consensus 294 W~~~~~i~~~~--~~~~~~~~~~~g~i~~~~------------------~~~~~~~yd~~~~~~~~i~ 341 (366)
........... ....-+.+..+|.+++.. ....++.||+++++++.+.
T Consensus 118 ~~~~~~~~~~~~~~~~~~i~~d~dG~l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~~~g~~~~~~ 185 (305)
T 3dr2_A 118 AHLLVGRYAGKRLNSPNDLIVARDGAIWFTDPPFGLRKPSQGCPADPELAHHSVYRLPPDGSPLQRMA 185 (305)
T ss_dssp EEEEECEETTEECSCCCCEEECTTSCEEEECCSGGGSCGGGSCCCCCSSSCEEEEEECSSSCCCEEEE
T ss_pred EEEEEeccCCCccCCCCCEEECCCCCEEEeCcCCCccccccccccccccCCCeEEEEcCCCCcEEEEe
Confidence 22221111100 112235566778888742 1257999999888776653
No 117
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=39.89 E-value=2.8e+02 Score=27.11 Aligned_cols=109 Identities=14% Similarity=0.119 Sum_probs=52.4
Q ss_pred CceEEEEEecCCCceEEEEEeCCCceeeEeCCCCCCCCCCccccccccceeeE--ecCeEEEEEeCCCCCEEEEEEeeCC
Q 039662 215 NGFCYWVVCRPDYSKAILSFSMSDEVFEEMEGPSVPQSTTYYQSVKTPWMLGT--YDDCLSLLYSDSFAHTFELWTMTGG 292 (366)
Q Consensus 215 ~G~lywl~~~~~~~~~Il~fD~~~~~~~~i~~P~~~~~~~~~~~l~~~~~~~~--~~G~L~~~~~~~~~~~~~IW~l~~~ 292 (366)
+|.|||... .....|.++++....-..+-. ..... ...| +. .+|+|+++.. ....|.+.-++|.
T Consensus 507 ~g~ly~td~--~~~~~I~~~~~dG~~~~~l~~-~~l~~---PnGl------avd~~~~~LY~aD~--~~~~I~~~d~dG~ 572 (699)
T 1n7d_A 507 HGFMYWTDW--GTPAKIKKGGLNGVDIYSLVT-ENIQW---PNGI------TLDLLSGRLYWVDS--KLHSISSIDVNGG 572 (699)
T ss_dssp SSCCEECCC--SSSCCEEBCCSSSCCCCEESC-SSCSS---CCCE------EECTTTCCEEEEET--TTTEEEEECSSSS
T ss_pred CCcEEEccc--CCCCeEEEEeCCCCCeeEEEe-CCCCC---ccEE------EEeccCCEEEEEec--CCCeEEEEccCCC
Confidence 689999742 112568888887544333211 11100 0112 22 2577887764 3344443333332
Q ss_pred eeeEEEEecCCCcceeeEEEeeC-CeEEEEEc-CCeEEEEECCCCeEEE
Q 039662 293 NWTKHSTFGPFIETYQPIGFWRK-GEFFLESS-DKRVVLYDSTYQEMRD 339 (366)
Q Consensus 293 ~W~~~~~i~~~~~~~~~~~~~~~-g~i~~~~~-~~~~~~yd~~~~~~~~ 339 (366)
. .++ .+.....+.+|.++.-+ +.+|+... .++|..+|..+++..+
T Consensus 573 ~-~~~-~~~~~~~~~~P~glavd~~~lywtd~~~~~V~~~d~~~G~~~~ 619 (699)
T 1n7d_A 573 N-RKT-ILEDEKRLAHPFSLAVFEDKVFWTDIINEAIFSANRLTGSDVN 619 (699)
T ss_dssp C-CEE-ECCCSSSCSSCCCCEEETTEEEEECSTTTCEEEEETTTEEEEE
T ss_pred c-eEE-EEecCCcCCCceEeEEECCEEEEEeCCCCeEEEEEccCCCceE
Confidence 1 111 11111123344444323 45665543 5789999988776544
No 118
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=39.53 E-value=2.5e+02 Score=26.58 Aligned_cols=194 Identities=8% Similarity=-0.001 Sum_probs=95.7
Q ss_pred cceEEEee-cCCeEEEEeCCCcceee-cCCCCCCCCCcccccceeeEEeecCCCCCeEEEEEEeeecccCCCCCCcceEE
Q 039662 106 DGIFCLLK-SHTLINLWNVSLNEYRV-IPECRPRLPLYTKTHYANVALGLDPVTKDFKLVLILTLWNDHRDSFHDFSHVA 183 (366)
Q Consensus 106 ~GLl~~~~-~~~~~~V~NP~T~~~~~-LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~~ 183 (366)
++++.+.. ..+.+.|+++.|++... +|.... ..++.++|.. .|-.+ ... + -.+.
T Consensus 166 ~~~~~V~~~~~~~V~viD~~t~~v~~~i~~g~~-----------p~~v~~SpDG-r~lyv-~~~------d-----g~V~ 221 (567)
T 1qks_A 166 ENLFSVTLRDAGQIALIDGSTYEIKTVLDTGYA-----------VHISRLSASG-RYLFV-IGR------D-----GKVN 221 (567)
T ss_dssp GGEEEEEETTTTEEEEEETTTCCEEEEEECSSC-----------EEEEEECTTS-CEEEE-EET------T-----SEEE
T ss_pred CceEEEEeCCCCeEEEEECCCCeEEEEEeCCCC-----------ccceEECCCC-CEEEE-EcC------C-----CeEE
Confidence 44555554 34569999999987763 553221 1356677653 34332 211 2 1678
Q ss_pred EEEcCCCceeecCCCccccceeecccceEEE-----CceEEEEEecCCCceEEEEEeCCCcee-eEeCCCCCCCCC----
Q 039662 184 VYKFSTNSWRDLEGFEMRYDYMVDRIFNVYL-----NGFCYWVVCRPDYSKAILSFSMSDEVF-EEMEGPSVPQST---- 253 (366)
Q Consensus 184 vyss~~~~W~~~~~~~~~~~~~~~~~~~v~~-----~G~lywl~~~~~~~~~Il~fD~~~~~~-~~i~~P~~~~~~---- 253 (366)
+|+..+.+-+.+..++..... ....+. +|..-+.+. .....+..+|..+.+- ..++........
T Consensus 222 viD~~~~t~~~v~~i~~G~~P----~~ia~s~~~~pDGk~l~v~n--~~~~~v~ViD~~t~~~~~~i~~~~~~~~~~~~~ 295 (567)
T 1qks_A 222 MIDLWMKEPTTVAEIKIGSEA----RSIETSKMEGWEDKYAIAGA--YWPPQYVIMDGETLEPKKIQSTRGMTYDEQEYH 295 (567)
T ss_dssp EEETTSSSCCEEEEEECCSEE----EEEEECCSTTCTTTEEEEEE--EETTEEEEEETTTCCEEEEEECCEECTTTCCEE
T ss_pred EEECCCCCCcEeEEEecCCCC----ceeEEccccCCCCCEEEEEE--ccCCeEEEEECCCCcEEEEEecccccccccccc
Confidence 888752222333222221111 111222 575444442 2234688899887554 345543211000
Q ss_pred --CccccccccceeeEe-cCeEEEEEeCCCCCEEEEEEee--CCeeeEEEEecCCCcceeeEEEeeCCeEEEEE--cCCe
Q 039662 254 --TYYQSVKTPWMLGTY-DDCLSLLYSDSFAHTFELWTMT--GGNWTKHSTFGPFIETYQPIGFWRKGEFFLES--SDKR 326 (366)
Q Consensus 254 --~~~~~l~~~~~~~~~-~G~L~~~~~~~~~~~~~IW~l~--~~~W~~~~~i~~~~~~~~~~~~~~~g~i~~~~--~~~~ 326 (366)
.....+ ... ++...++.. .+.. .||+.+ .....++..|... ...+..++..+|..++.. .+++
T Consensus 296 p~~rva~i------~~s~~~~~~vv~~-~~~g--~v~~vd~~~~~~~~v~~i~~~-~~~~d~~~~pdgr~~~va~~~sn~ 365 (567)
T 1qks_A 296 PEPRVAAI------LASHYRPEFIVNV-KETG--KILLVDYTDLNNLKTTEISAE-RFLHDGGLDGSHRYFITAANARNK 365 (567)
T ss_dssp SCCCEEEE------EECSSSSEEEEEE-TTTT--EEEEEETTCSSEEEEEEEECC-SSEEEEEECTTSCEEEEEEGGGTE
T ss_pred CCCceEEE------EEcCCCCEEEEEe-cCCC--eEEEEecCCCccceeeeeecc-ccccCceECCCCCEEEEEeCCCCe
Confidence 000111 111 233333332 1222 455555 3334444445432 334566777788766553 3688
Q ss_pred EEEEECCCCeEEE
Q 039662 327 VVLYDSTYQEMRD 339 (366)
Q Consensus 327 ~~~yd~~~~~~~~ 339 (366)
+.++|.+++++..
T Consensus 366 V~ViD~~t~kl~~ 378 (567)
T 1qks_A 366 LVVIDTKEGKLVA 378 (567)
T ss_dssp EEEEETTTTEEEE
T ss_pred EEEEECCCCcEEE
Confidence 9999999998754
No 119
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=38.95 E-value=1.8e+02 Score=24.60 Aligned_cols=70 Identities=14% Similarity=0.171 Sum_probs=41.0
Q ss_pred CeEEEEEeCCCCCEEEEEEeeCCeeeEEEEecCCCcceeeEEEeeCCeEEEE-EcCCeEEEEECCCCeEEEEE
Q 039662 270 DCLSLLYSDSFAHTFELWTMTGGNWTKHSTFGPFIETYQPIGFWRKGEFFLE-SSDKRVVLYDSTYQEMRDIR 341 (366)
Q Consensus 270 G~L~~~~~~~~~~~~~IW~l~~~~W~~~~~i~~~~~~~~~~~~~~~g~i~~~-~~~~~~~~yd~~~~~~~~i~ 341 (366)
|.+.+... ....+.||-++.........+........-+.+..++..++. ..++.+..||+++++...+.
T Consensus 54 g~~l~~~~--~dg~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~ 124 (368)
T 3mmy_A 54 GNFLIAGS--WANDVRCWEVQDSGQTIPKAQQMHTGPVLDVCWSDDGSKVFTASCDKTAKMWDLSSNQAIQIA 124 (368)
T ss_dssp SEEEEEEE--TTSEEEEEEECTTSCEEEEEEEECSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEE
T ss_pred ceEEEEEC--CCCcEEEEEcCCCCceeEEEeccccCCEEEEEECcCCCEEEEEcCCCcEEEEEcCCCCceeec
Confidence 46555554 457899999883112222222221222334455566765544 45889999999999876644
No 120
>2jp2_A Spred-2, sprouty-related, EVH1 domain-containing protein 2; solution structure, structural genomics, structural genomics consortium, SGC; NMR {Homo sapiens}
Probab=37.88 E-value=63 Score=23.98 Aligned_cols=41 Identities=7% Similarity=-0.148 Sum_probs=24.8
Q ss_pred EEEEeCCCcceeecCCCCCCCCCcccccceeeEEee---cCCCCCeEEEEEE
Q 039662 118 INLWNVSLNEYRVIPECRPRLPLYTKTHYANVALGL---DPVTKDFKLVLIL 166 (366)
Q Consensus 118 ~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~---d~~~~~ykvv~~~ 166 (366)
+++.+|.|+.|...-... .+...+.+.. |...+.|+|+...
T Consensus 22 Vm~~D~~~~~W~p~~~g~--------ls~v~v~~~~~~~d~~~~~yrI~~~~ 65 (126)
T 2jp2_A 22 VMTRDDSSGGWFPQEGGG--------ISRVGVCKVMHPEGNGRSGFLIHGER 65 (126)
T ss_dssp EEEECTTSSSSEECSCCS--------CEEEEEECCBCTTCSSCBCEEEEEEE
T ss_pred EeeEcCCCCCEeeCCCCC--------cccEEEEEecCCCCCCCCEEEEEEEE
Confidence 888899999875443221 1112233333 5566789999875
No 121
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=37.82 E-value=1.8e+02 Score=24.28 Aligned_cols=191 Identities=9% Similarity=0.040 Sum_probs=0.0
Q ss_pred eecc-eEEEee------------cCCeEEEEeCCCcceeecCCCCCCCCCcccccceeeEEeecCCCCCeEEEEEEeeec
Q 039662 104 PYDG-IFCLLK------------SHTLINLWNVSLNEYRVIPECRPRLPLYTKTHYANVALGLDPVTKDFKLVLILTLWN 170 (366)
Q Consensus 104 s~~G-Ll~~~~------------~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~ 170 (366)
+-+| .+.... ....+.++++.|++....-+..... .++.++|..+..-+. ..
T Consensus 90 s~dg~~l~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~~~~~~----------~~~~~s~dg~~l~~~--~~--- 154 (337)
T 1pby_B 90 SPDGKTLAIYESPVRLELTHFEVQPTRVALYDAETLSRRKAFEAPRQI----------TMLAWARDGSKLYGL--GR--- 154 (337)
T ss_dssp CTTSSEEEEEEEEEEECSSCEEECCCEEEEEETTTTEEEEEEECCSSC----------CCEEECTTSSCEEEE--SS---
T ss_pred CCCCCEEEEEecccccccccccccCceEEEEECCCCcEEEEEeCCCCc----------ceeEECCCCCEEEEe--CC---
Q ss_pred ccCCCCCCcceEEEEEcCCCceeecCCCccccceeecccceEEECceEEEEEecCCCce---------------------
Q 039662 171 DHRDSFHDFSHVAVYKFSTNSWRDLEGFEMRYDYMVDRIFNVYLNGFCYWVVCRPDYSK--------------------- 229 (366)
Q Consensus 171 ~~~~~~~~~~~~~vyss~~~~W~~~~~~~~~~~~~~~~~~~v~~~G~lywl~~~~~~~~--------------------- 229 (366)
.+.+|+..++.-...-......... ...-+|...|......+..
T Consensus 155 ----------~i~~~d~~~~~~~~~~~~~~~~~~~-----~~s~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 219 (337)
T 1pby_B 155 ----------DLHVMDPEAGTLVEDKPIQSWEAET-----YAQPDVLAVWNQHESSGVMATPFYTARKDIDPADPTAYRT 219 (337)
T ss_dssp ----------SEEEEETTTTEEEEEECSTTTTTTT-----BCCCBCCCCCCCCTTTTEEEEEEEEEBTTSCTTSGGGEEE
T ss_pred ----------eEEEEECCCCcEeeeeeccccCCCc-----eeCCCccEEeeeccCCCceeeeeecccccccccccccccc
Q ss_pred EEEEEeCCCceeeEeCCCCCCCCCCccccccccceeeEecCeEEEEEeCCCCCEEEEEEeeCCeeeEEEEecCCCcceee
Q 039662 230 AILSFSMSDEVFEEMEGPSVPQSTTYYQSVKTPWMLGTYDDCLSLLYSDSFAHTFELWTMTGGNWTKHSTFGPFIETYQP 309 (366)
Q Consensus 230 ~Il~fD~~~~~~~~i~~P~~~~~~~~~~~l~~~~~~~~~~G~L~~~~~~~~~~~~~IW~l~~~~W~~~~~i~~~~~~~~~ 309 (366)
.|..+|+++.+...+.++.......... ..-+|+..++. ...+.+|-++..+-....... ....-
T Consensus 220 ~v~~~d~~~~~~~~~~~~~~~~~~~~~~--------~s~dg~~l~~~----~~~v~~~d~~~~~~~~~~~~~---~~~~~ 284 (337)
T 1pby_B 220 GLLTMDLETGEMAMREVRIMDVFYFSTA--------VNPAKTRAFGA----YNVLESFDLEKNASIKRVPLP---HSYYS 284 (337)
T ss_dssp EEEEEETTTCCEEEEEEEECSSCEEEEE--------ECTTSSEEEEE----ESEEEEEETTTTEEEEEEECS---SCCCE
T ss_pred ceEEEeCCCCCceEeecCCCCCceeeEE--------ECCCCCEEEEe----CCeEEEEECCCCcCcceecCC---Cceee
Q ss_pred EEEeeCCeEEEEEc-CCeEEEEECCCCeEEE
Q 039662 310 IGFWRKGEFFLESS-DKRVVLYDSTYQEMRD 339 (366)
Q Consensus 310 ~~~~~~g~i~~~~~-~~~~~~yd~~~~~~~~ 339 (366)
+.+..+|+.++... ++.+..||+++++...
T Consensus 285 ~~~s~dg~~l~~~~~~~~i~v~d~~~~~~~~ 315 (337)
T 1pby_B 285 VNVSTDGSTVWLGGALGDLAAYDAETLEKKG 315 (337)
T ss_dssp EEECTTSCEEEEESBSSEEEEEETTTCCEEE
T ss_pred EEECCCCCEEEEEcCCCcEEEEECcCCcEEE
No 122
>2kwv_A RAD30 homolog B, DNA polymerase IOTA; ubiquitin-binding motif, UBM, TL protein binding-signaling protein complex; HET: DNA; NMR {Mus musculus}
Probab=37.68 E-value=16 Score=21.74 Aligned_cols=15 Identities=40% Similarity=0.339 Sum_probs=11.5
Q ss_pred cCCcHHHHHHHHhcC
Q 039662 4 KYLSDDMMIETLSRL 18 (366)
Q Consensus 4 ~~LP~Dll~eIL~rL 18 (366)
+.||.||-+|||+--
T Consensus 22 ~~LP~dIQ~Ells~~ 36 (48)
T 2kwv_A 22 KQLPADIQEEILSGK 36 (48)
T ss_dssp TTSCHHHHHHHTTCC
T ss_pred HHCcHHHHHHHHhcc
Confidence 578888888888754
No 123
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=37.51 E-value=1.9e+02 Score=24.60 Aligned_cols=162 Identities=13% Similarity=0.032 Sum_probs=0.0
Q ss_pred cceEEEee--cCCeEEEEeCCCcceeecCCCCCCCCCcccccceeeEEeecCCCCCeEEEEEEeeecccCCCCCCcceEE
Q 039662 106 DGIFCLLK--SHTLINLWNVSLNEYRVIPECRPRLPLYTKTHYANVALGLDPVTKDFKLVLILTLWNDHRDSFHDFSHVA 183 (366)
Q Consensus 106 ~GLl~~~~--~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~~ 183 (366)
+|.+.+.+ ...++.++++..+....+..................++.+|+..+ .++.... ..-.+.
T Consensus 154 ~g~lyv~d~~~~~~I~~~~~~g~~~~~~~~~g~~~~~~~~~~~~p~gia~d~~~g--~l~v~d~----------~~~~I~ 221 (329)
T 3fvz_A 154 TGAVFVSDGYCNSRIVQFSPSGKFVTQWGEESSGSSPRPGQFSVPHSLALVPHLD--QLCVADR----------ENGRIQ 221 (329)
T ss_dssp TCCEEEEECSSCCEEEEECTTSCEEEEECEECCSSSCCTTEESCEEEEEEETTTT--EEEEEET----------TTTEEE
T ss_pred CCeEEEEeCCCCCeEEEEcCCCCEEEEeccCCCCCCCCCcccCCCcEEEEECCCC--EEEEEEC----------CCCEEE
Q ss_pred EEEcCCCceeecCCCc----cccceeecccceEEECceEEEEEecCCCceEEEEEeCCCceeeEeCCCCCCCCCCccccc
Q 039662 184 VYKFSTNSWRDLEGFE----MRYDYMVDRIFNVYLNGFCYWVVCRPDYSKAILSFSMSDEVFEEMEGPSVPQSTTYYQSV 259 (366)
Q Consensus 184 vyss~~~~W~~~~~~~----~~~~~~~~~~~~v~~~G~lywl~~~~~~~~~Il~fD~~~~~~~~i~~P~~~~~~~~~~~l 259 (366)
+|+..++.....-..+ .+..........+..+|.+|.. ......|..+|..+++....-.+.........--.
T Consensus 222 ~~~~~~G~~~~~~~~~~~~~~~~~~~~~pg~~~~~~g~~~v~---~~~~~~v~~~~~~~g~~~~~~~~~~~~~~~p~~ia 298 (329)
T 3fvz_A 222 CFKTDTKEFVREIKHASFGRNVFAISYIPGFLFAVNGKPYFG---DQEPVQGFVMNFSSGEIIDVFKPVRKHFDMPHDIV 298 (329)
T ss_dssp EEETTTCCEEEEECCTTTTTCEEEEEEETTEEEEEECCCCTT---CSCCCCEEEEETTTCCEEEEECCSSSCCSSEEEEE
T ss_pred EEECCCCcEEEEEeccccCCCcceeeecCCEEEEeCCCEEec---cCCCcEEEEEEcCCCeEEEEEcCCCCccCCeeEEE
Q ss_pred cccceeeEecCeEEEEEeCCCCCEEEEEEee
Q 039662 260 KTPWMLGTYDDCLSLLYSDSFAHTFELWTMT 290 (366)
Q Consensus 260 ~~~~~~~~~~G~L~~~~~~~~~~~~~IW~l~ 290 (366)
..-+|.|++... ....+.+|.++
T Consensus 299 ------~~~dG~lyvad~--~~~~I~~~~~~ 321 (329)
T 3fvz_A 299 ------ASEDGTVYIGDA--HTNTVWKFTLT 321 (329)
T ss_dssp ------ECTTSEEEEEES--SSCCEEEEEEE
T ss_pred ------ECCCCCEEEEEC--CCCEEEEEeCC
No 124
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=36.33 E-value=2.9e+02 Score=26.39 Aligned_cols=115 Identities=12% Similarity=0.113 Sum_probs=59.3
Q ss_pred cceEEECceEEEEEecCCCceEEEEEeC-CCc--eeeEeCCCCCCC------CCCccccccccceeeE--ecCe----EE
Q 039662 209 IFNVYLNGFCYWVVCRPDYSKAILSFSM-SDE--VFEEMEGPSVPQ------STTYYQSVKTPWMLGT--YDDC----LS 273 (366)
Q Consensus 209 ~~~v~~~G~lywl~~~~~~~~~Il~fD~-~~~--~~~~i~~P~~~~------~~~~~~~l~~~~~~~~--~~G~----L~ 273 (366)
..++..+|.+|... . ....|.++|. +++ .|+. +.+.... .......+ .. .+|+ |+
T Consensus 56 ~tP~v~~g~vyv~~--~-~~~~v~AlD~~~tG~~lW~~-~~~~~~~~~~~~~~~~~~~g~------av~p~~g~~~~rV~ 125 (599)
T 1w6s_A 56 GAPLVVDGKMYIHT--S-FPNNTFALGLDDPGTILWQD-KPKQNPAARAVACCDLVNRGL------AYWPGDGKTPALIL 125 (599)
T ss_dssp SCCEEETTEEEEEC--S-TTTCEEEEETTCTTSEEEEE-CCCCCGGGGGGCSSCSCCCCC------EEECCCSSSCCEEE
T ss_pred eccEEECCEEEEEe--C-CCCEEEEEeCCCCCcEEEEE-CCCCCccccccccccccccce------EEEecCCcceeEEE
Confidence 56778899999875 2 0236999999 665 4543 2222110 00000112 33 4555 55
Q ss_pred EEEeCCCCCEEEEEEee---C-CeeeEEEEec-CCCcc-eeeEEEeeCCeEEEEEc------CCeEEEEECCCCeEEEE
Q 039662 274 LLYSDSFAHTFELWTMT---G-GNWTKHSTFG-PFIET-YQPIGFWRKGEFFLESS------DKRVVLYDSTYQEMRDI 340 (366)
Q Consensus 274 ~~~~~~~~~~~~IW~l~---~-~~W~~~~~i~-~~~~~-~~~~~~~~~g~i~~~~~------~~~~~~yd~~~~~~~~i 340 (366)
+...+ . .+..|+ | ..|.....-. ....+ ..|+. .++.+++... ++.++.||.+|++..+-
T Consensus 126 v~t~d---g--~l~AlDa~TG~~~W~~~~~~~~~~~~~~ssP~v--~~g~V~vg~~g~e~g~~g~v~A~D~~TG~~~W~ 197 (599)
T 1w6s_A 126 KTQLD---G--NVAALNAETGETVWKVENSDIKVGSTLTIAPYV--VKDKVIIGSSGAELGVRGYLTAYDVKTGEQVWR 197 (599)
T ss_dssp EECTT---S--EEEEEETTTCCEEEEEECCCGGGTCBCCSCCEE--ETTEEEECCBCGGGTCCCEEEEEETTTCCEEEE
T ss_pred EEcCC---C--EEEEEECCCCCEEEeecCCCCCccceeecCCEE--ECCEEEEEecccccCCCCeEEEEECCCCcEEEE
Confidence 44321 1 344455 3 4576532110 00011 23443 2566665542 57899999999987763
No 125
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=34.79 E-value=3.6e+02 Score=26.90 Aligned_cols=173 Identities=11% Similarity=0.073 Sum_probs=87.2
Q ss_pred eEEeecCCCCCeEEEEEEeeecccCCCCCCcceEEEEEcCCCceeecCCCccccceeecccceEEE---CceEEEEEecC
Q 039662 149 VALGLDPVTKDFKLVLILTLWNDHRDSFHDFSHVAVYKFSTNSWRDLEGFEMRYDYMVDRIFNVYL---NGFCYWVVCRP 225 (366)
Q Consensus 149 ~~~g~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~~vyss~~~~W~~~~~~~~~~~~~~~~~~~v~~---~G~lywl~~~~ 225 (366)
.++++|...+ +|++... ..-.++++++....-+.+.. ... ....++.+ +|.|||.-.
T Consensus 474 ~GLAvD~~~~--~LY~tD~----------~~~~I~v~~ldG~~~~~l~~--~~l----~~P~gIaVDp~~g~LYwtD~-- 533 (791)
T 3m0c_C 474 DGLAVDWIHS--NIYWTDS----------VLGTVSVADTKGVKRKTLFR--ENG----SKPRAIVVDPVHGFMYWTDW-- 533 (791)
T ss_dssp CEEEEETTTT--EEEEEET----------TTTEEEEEETTSSSEEEEEE--CTT----CCEEEEEEETTTTEEEEEEC--
T ss_pred ceeeeeecCC--cEEEEec----------CCCeEEEEeCCCCeEEEEEe--CCC----CCcceEEEecCCCCEEEecC--
Confidence 5777876554 3443322 12267888877655444411 010 11234444 589999852
Q ss_pred CCceEEEEEeCCCceeeEeCCCCCCCCCCccccccccceeeE--ecCeEEEEEeCCCCCEEEEEEee-CCeeeEEEEecC
Q 039662 226 DYSKAILSFSMSDEVFEEMEGPSVPQSTTYYQSVKTPWMLGT--YDDCLSLLYSDSFAHTFELWTMT-GGNWTKHSTFGP 302 (366)
Q Consensus 226 ~~~~~Il~fD~~~~~~~~i~~P~~~~~~~~~~~l~~~~~~~~--~~G~L~~~~~~~~~~~~~IW~l~-~~~W~~~~~i~~ 302 (366)
.....|..++++...-..+- ..... ....| +. .+|+|+++.. ... .||+.+ ++.-.++. +..
T Consensus 534 g~~~~I~~~~~dG~~~~~lv-~~~l~---~P~GL------avD~~~~~LYwaD~--~~~--~I~~~d~dG~~~~~v-~~~ 598 (791)
T 3m0c_C 534 GTPAKIKKGGLNGVDIYSLV-TENIQ---WPNGI------TLDLLSGRLYWVDS--KLH--SISSIDVNGGNRKTI-LED 598 (791)
T ss_dssp SSSCEEEEEETTSCCEEEEE-CSSCS---CEEEE------EEETTTTEEEEEET--TTT--EEEEEETTSCSCEEE-EEC
T ss_pred CCCCeEEEEecCCCceEEEE-eCCCC---CceEE------EEecCCCeEEEEeC--CCC--cEEEEecCCCceEEE-ecC
Confidence 22357999999876544431 11111 11122 32 3788888854 333 466666 22111111 111
Q ss_pred CCcceeeEEEeeC-CeEEEEEc-CCeEEEEECCCCeEEEEEEeCcE--EEEEEeeecc
Q 039662 303 FIETYQPIGFWRK-GEFFLESS-DKRVVLYDSTYQEMRDIRITGLW--FTVHVLKESL 356 (366)
Q Consensus 303 ~~~~~~~~~~~~~-g~i~~~~~-~~~~~~yd~~~~~~~~i~~~~~~--~~~~~y~~sl 356 (366)
...+.+|+++.-. +.||+... ...|...|..+++-..+-..+.. +.+.+|.+..
T Consensus 599 ~~~l~~P~glav~~~~lYwtD~~~~~I~~~dk~tG~~~~~l~~~l~~P~~i~v~h~~~ 656 (791)
T 3m0c_C 599 EKRLAHPFSLAVFEDKVFWTDIINEAIFSANRLTGSDVNLLAENLLSPEDMVLFHNLT 656 (791)
T ss_dssp TTTTSSEEEEEEETTEEEEEETTTTEEEEEETTTCCCCEEEECSCSCCCCEEEESGGG
T ss_pred CCccCCCCEEEEeCCEEEEEECCCCEEEEEeCCCCcceEEeecCCCCceeEeeecccc
Confidence 1134466666543 45666654 57888999766643332232222 4455565544
No 126
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=34.74 E-value=2.8e+02 Score=25.67 Aligned_cols=100 Identities=12% Similarity=0.159 Sum_probs=53.5
Q ss_pred ceEEEEEeCCCcee-eEeCCCCCCCCCCccccccccceeeEecCeEEEE-Ee---CCCCCEEEEEEeeCCeeeEEEEecC
Q 039662 228 SKAILSFSMSDEVF-EEMEGPSVPQSTTYYQSVKTPWMLGTYDDCLSLL-YS---DSFAHTFELWTMTGGNWTKHSTFGP 302 (366)
Q Consensus 228 ~~~Il~fD~~~~~~-~~i~~P~~~~~~~~~~~l~~~~~~~~~~G~L~~~-~~---~~~~~~~~IW~l~~~~W~~~~~i~~ 302 (366)
...|..+|+++.+- ..++++.... ....+. ++..-+|+.+++ +. .....++.+|..+++.|.....|+.
T Consensus 227 ~d~V~v~D~~~~k~~~tI~vg~~g~---~P~~i~---f~~~Pdg~~aYV~~e~~~~~Lss~V~v~~~d~g~~~~~~vIdi 300 (462)
T 2ece_A 227 GNRIHFWDLRKRKRIHSLTLGEENR---MALELR---PLHDPTKLMGFINMVVSLKDLSSSIWLWFYEDGKWNAEKVIEI 300 (462)
T ss_dssp CCEEEEEETTTTEEEEEEESCTTEE---EEEEEE---ECSSTTCCEEEEEEEEETTTCCEEEEEEEEETTEEEEEEEEEE
T ss_pred CCEEEEEECCCCcEeeEEecCCCCC---ccceeE---eeECCCCCEEEEEEeeeccCCCceEEEEEecCCceeEEEEEeC
Confidence 46799999988654 4566642110 001110 001225664444 32 1123455555555677888777642
Q ss_pred CC------------------cceeeEEEeeCCeEEEEEc--CCeEEEEECC
Q 039662 303 FI------------------ETYQPIGFWRKGEFFLESS--DKRVVLYDST 333 (366)
Q Consensus 303 ~~------------------~~~~~~~~~~~g~i~~~~~--~~~~~~yd~~ 333 (366)
.. ....-+.+..+|+.+++.+ .+.+..||..
T Consensus 301 ~~~~v~~~lp~~~~~f~~~~~~pa~I~lS~DGrfLYVSnrg~d~VavfdV~ 351 (462)
T 2ece_A 301 PAEPLEGNLPEILKPFKAVPPLVTDIDISLDDKFLYLSLWGIGEVRQYDIS 351 (462)
T ss_dssp CCEECCSSCCGGGGGGTEECCCCCCEEECTTSCEEEEEETTTTEEEEEECS
T ss_pred CCccccccccccccccccCCCceeEEEECCCCCEEEEEeCCCCEEEEEEec
Confidence 21 1123455677888666654 6789999975
No 127
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=34.30 E-value=3.3e+02 Score=26.44 Aligned_cols=141 Identities=15% Similarity=0.109 Sum_probs=75.6
Q ss_pred ceEEEEEcCCC--c-eeecCCCccccceeecccceE-EECceEEEEEecCCCceEEEEEeCCC--ceeeEeCCCCCCCCC
Q 039662 180 SHVAVYKFSTN--S-WRDLEGFEMRYDYMVDRIFNV-YLNGFCYWVVCRPDYSKAILSFSMSD--EVFEEMEGPSVPQST 253 (366)
Q Consensus 180 ~~~~vyss~~~--~-W~~~~~~~~~~~~~~~~~~~v-~~~G~lywl~~~~~~~~~Il~fD~~~--~~~~~i~~P~~~~~~ 253 (366)
..+.+++..++ . |+.+. ..... ....+ .-++.+|+.+........|+..|+++ +.|..+- |....
T Consensus 294 ~~l~~~d~~~~~~~~~~~l~---~~~~~---~~~~~~~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~l~-~~~~~-- 364 (741)
T 1yr2_A 294 NTVHVARVTNGKIGPVTALI---PDLKA---QWDFVDGVGDQLWFVSGDGAPLKKIVRVDLSGSTPRFDTVV-PESKD-- 364 (741)
T ss_dssp CEEEEEEEETTEECCCEEEE---CSSSS---CEEEEEEETTEEEEEECTTCTTCEEEEEECSSSSCEEEEEE-CCCSS--
T ss_pred ceEEEEECCCCCCcccEEec---CCCCc---eEEEEeccCCEEEEEECCCCCCCEEEEEeCCCCccccEEEe-cCCCC--
Confidence 35666777666 6 87773 11111 01112 23566787763322356799999988 5676653 33211
Q ss_pred CccccccccceeeEecCeEEEEEeCCCCCEEEEEEee-CCeeeEEEEecCC-CcceeeEEEeeCCe-EEEEEc----CCe
Q 039662 254 TYYQSVKTPWMLGTYDDCLSLLYSDSFAHTFELWTMT-GGNWTKHSTFGPF-IETYQPIGFWRKGE-FFLESS----DKR 326 (366)
Q Consensus 254 ~~~~~l~~~~~~~~~~G~L~~~~~~~~~~~~~IW~l~-~~~W~~~~~i~~~-~~~~~~~~~~~~g~-i~~~~~----~~~ 326 (366)
....+ ...++.|.+... ......||+++ ++. ....+... ......+.+..+++ +++... ...
T Consensus 365 -~l~~~------~~~~~~lv~~~~--~dg~~~l~~~~~~g~--~~~~l~~~~~~~v~~~~~s~d~~~l~~~~ss~~~P~~ 433 (741)
T 1yr2_A 365 -NLESV------GIAGNRLFASYI--HDAKSQVLAFDLDGK--PAGAVSLPGIGSASGLSGRPGDRHAYLSFSSFTQPAT 433 (741)
T ss_dssp -EEEEE------EEEBTEEEEEEE--ETTEEEEEEEETTSC--EEEECBCSSSCEEEEEECCBTCSCEEEEEEETTEEEE
T ss_pred -eEEEE------EEECCEEEEEEE--ECCEEEEEEEeCCCC--ceeeccCCCCeEEEEeecCCCCCEEEEEEcCCCCCCE
Confidence 11122 334788777765 34577888887 322 23334321 12222233334544 555433 367
Q ss_pred EEEEECCCCeEEEE
Q 039662 327 VVLYDSTYQEMRDI 340 (366)
Q Consensus 327 ~~~yd~~~~~~~~i 340 (366)
++.||+.+++.+.+
T Consensus 434 i~~~d~~tg~~~~l 447 (741)
T 1yr2_A 434 VLALDPATAKTTPW 447 (741)
T ss_dssp EEEEETTTTEEEEC
T ss_pred EEEEECCCCcEEEE
Confidence 99999998876544
No 128
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=34.01 E-value=2.4e+02 Score=24.62 Aligned_cols=205 Identities=9% Similarity=0.012 Sum_probs=99.7
Q ss_pred cc-eEEEeecCCeEEEEeCCCcceeecCCCCCCCCCcccccceeeEEeecCCCCCeEEEEEEeeecccCCCCCCcceEEE
Q 039662 106 DG-IFCLLKSHTLINLWNVSLNEYRVIPECRPRLPLYTKTHYANVALGLDPVTKDFKLVLILTLWNDHRDSFHDFSHVAV 184 (366)
Q Consensus 106 ~G-Ll~~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~~v 184 (366)
+| +|+....++.+.|||..++....-...+.....+ .......+.+.|.... .++.... + -.+.+
T Consensus 93 ~~~~l~s~s~dg~v~vw~~~~~~~~~~~~~~~~~~~~--h~~~v~~~~~~p~~~~-~l~s~~~------d-----g~i~i 158 (402)
T 2aq5_A 93 NDNVIASGSEDCTVMVWEIPDGGLVLPLREPVITLEG--HTKRVGIVAWHPTAQN-VLLSAGC------D-----NVILV 158 (402)
T ss_dssp CTTEEEEEETTSEEEEEECCTTCCSSCBCSCSEEEEC--CSSCEEEEEECSSBTT-EEEEEET------T-----SCEEE
T ss_pred CCCEEEEEeCCCeEEEEEccCCCCccccCCceEEecC--CCCeEEEEEECcCCCC-EEEEEcC------C-----CEEEE
Confidence 44 4444455667999999887543211000000000 1123356667665422 2332222 2 26788
Q ss_pred EEcCCCceeecCCCccccceeecccceEEE--CceEEEEEecCCCceEEEEEeCCCceeeE-e-CCCCCCCCCCcccccc
Q 039662 185 YKFSTNSWRDLEGFEMRYDYMVDRIFNVYL--NGFCYWVVCRPDYSKAILSFSMSDEVFEE-M-EGPSVPQSTTYYQSVK 260 (366)
Q Consensus 185 yss~~~~W~~~~~~~~~~~~~~~~~~~v~~--~G~lywl~~~~~~~~~Il~fD~~~~~~~~-i-~~P~~~~~~~~~~~l~ 260 (366)
|+.+++.....-...... ....++.+ +|.....+. . ...|..+|+.+.+... + ...... ....+
T Consensus 159 wd~~~~~~~~~~~~~~~~----~~v~~~~~~~~~~~l~~~~-~--d~~i~iwd~~~~~~~~~~~~~~~~~----~~~~~- 226 (402)
T 2aq5_A 159 WDVGTGAAVLTLGPDVHP----DTIYSVDWSRDGALICTSC-R--DKRVRVIEPRKGTVVAEKDRPHEGT----RPVHA- 226 (402)
T ss_dssp EETTTTEEEEEECTTTCC----SCEEEEEECTTSSCEEEEE-T--TSEEEEEETTTTEEEEEEECSSCSS----SCCEE-
T ss_pred EECCCCCccEEEecCCCC----CceEEEEECCCCCEEEEEe-c--CCcEEEEeCCCCceeeeeccCCCCC----cceEE-
Confidence 998877543220000000 11122222 455444432 2 3468999998876532 3 222111 01111
Q ss_pred ccceeeEecCeEEEEEe-CCCCCEEEEEEee-CCeeeEEEEecCCCcceeeEEEeeCCeEEE-EE-cCCeEEEEECCCCe
Q 039662 261 TPWMLGTYDDCLSLLYS-DSFAHTFELWTMT-GGNWTKHSTFGPFIETYQPIGFWRKGEFFL-ES-SDKRVVLYDSTYQE 336 (366)
Q Consensus 261 ~~~~~~~~~G~L~~~~~-~~~~~~~~IW~l~-~~~W~~~~~i~~~~~~~~~~~~~~~g~i~~-~~-~~~~~~~yd~~~~~ 336 (366)
...-+|++.++.. ......+.||-+. +..=.....+.....+ .-+.+..++..++ .. .++.+.+||+++++
T Consensus 227 ----~~~~~~~~l~~g~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v-~~~~~s~~~~~l~~~g~~dg~i~i~d~~~~~ 301 (402)
T 2aq5_A 227 ----VFVSEGKILTTGFSRMSERQVALWDTKHLEEPLSLQELDTSSGV-LLPFFDPDTNIVYLCGKGDSSIRYFEITSEA 301 (402)
T ss_dssp ----EECSTTEEEEEEECTTCCEEEEEEETTBCSSCSEEEECCCCSSC-EEEEEETTTTEEEEEETTCSCEEEEEECSST
T ss_pred ----EEcCCCcEEEEeccCCCCceEEEEcCccccCCceEEeccCCCce-eEEEEcCCCCEEEEEEcCCCeEEEEEecCCC
Confidence 1223677655542 1356789999877 3321233333333232 3344566666554 44 37889999999887
Q ss_pred --EEEEE
Q 039662 337 --MRDIR 341 (366)
Q Consensus 337 --~~~i~ 341 (366)
+..+.
T Consensus 302 ~~~~~l~ 308 (402)
T 2aq5_A 302 PFLHYLS 308 (402)
T ss_dssp TCEEEEE
T ss_pred cceEeec
Confidence 65554
No 129
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=33.87 E-value=2.4e+02 Score=24.57 Aligned_cols=184 Identities=7% Similarity=0.028 Sum_probs=89.1
Q ss_pred cceEEEeecCCeEEEEeCCCcceeecCCCCCCCCCcccccceeeEEeecCCCCCeEEEEEEeeecccCCCCCCcceEEEE
Q 039662 106 DGIFCLLKSHTLINLWNVSLNEYRVIPECRPRLPLYTKTHYANVALGLDPVTKDFKLVLILTLWNDHRDSFHDFSHVAVY 185 (366)
Q Consensus 106 ~GLl~~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~~vy 185 (366)
.+.|++..... +...++.+.....+-+.. ....++.+|+..+ +|+.... ..-.+..+
T Consensus 44 ~~~ll~~~~~~-I~~i~~~g~~~~~~~~~~----------~~~~~l~~d~~~~--~ly~~D~----------~~~~I~r~ 100 (349)
T 3v64_C 44 EPVLLFANRID-IRQVLPHRSEYTLLLNNL----------ENAIALDFHHRRE--LVFWSDV----------TLDRILRA 100 (349)
T ss_dssp CCEEEEECBSC-EEEECTTSCCEEEEECSC----------SCEEEEEEETTTT--EEEEEET----------TTTEEEEE
T ss_pred CceeEeecccc-eEEEeCCCCeeEEeecCC----------CceEEEEEecccc--EEEEEec----------cCCceEEE
Confidence 56666666555 777777766655442211 1237888887654 3433322 11255666
Q ss_pred EcCCCceeecCCCccccceeecccceEEE---CceEEEEEecCCCceEEEEEeCCCceeeEeCCCCCCCCCCcccccccc
Q 039662 186 KFSTNSWRDLEGFEMRYDYMVDRIFNVYL---NGFCYWVVCRPDYSKAILSFSMSDEVFEEMEGPSVPQSTTYYQSVKTP 262 (366)
Q Consensus 186 ss~~~~W~~~~~~~~~~~~~~~~~~~v~~---~G~lywl~~~~~~~~~Il~fD~~~~~~~~i~~P~~~~~~~~~~~l~~~ 262 (366)
+..+..-+.+.. ... ....++.+ +|.+||.. .....|.++|++...-..+. ..... ....+
T Consensus 101 ~~~g~~~~~~~~--~~~----~~p~glavd~~~g~ly~~d---~~~~~I~~~~~dG~~~~~l~-~~~l~---~P~~i--- 164 (349)
T 3v64_C 101 NLNGSNVEEVVS--TGL----ESPGGLAVDWVHDKLYWTD---SGTSRIEVANLDGAHRKVLL-WQSLE---KPRAI--- 164 (349)
T ss_dssp ETTSCSCEEEEC--SSC----SCCCEEEEETTTTEEEEEE---TTTTEEEEEETTSCSCEEEE-CTTCS---CEEEE---
T ss_pred ecCCCCceEEEe--CCC----CCccEEEEecCCCeEEEEc---CCCCeEEEEcCCCCceEEEE-eCCCC---CcceE---
Confidence 666554443311 000 11233333 68999985 23457999998865433331 11111 11222
Q ss_pred ceeeEe--cCeEEEEEeCCCCCEEEEEEee--CCeeeEEEEecCCCcceeeEE--Ee-eCCeEEEEEc-CCeEEEEECCC
Q 039662 263 WMLGTY--DDCLSLLYSDSFAHTFELWTMT--GGNWTKHSTFGPFIETYQPIG--FW-RKGEFFLESS-DKRVVLYDSTY 334 (366)
Q Consensus 263 ~~~~~~--~G~L~~~~~~~~~~~~~IW~l~--~~~W~~~~~i~~~~~~~~~~~--~~-~~g~i~~~~~-~~~~~~yd~~~ 334 (366)
+.- +|.|++.... . .-.|+..+ |.. .+ .+. ...+..|.+ +. .++.+++... ..++..+|+..
T Consensus 165 ---avdp~~g~ly~td~~--~-~~~I~r~~~dG~~-~~--~~~-~~~~~~PnGla~d~~~~~lY~aD~~~~~I~~~~~dG 234 (349)
T 3v64_C 165 ---ALHPMEGTIYWTDWG--N-TPRIEASSMDGSG-RR--IIA-DTHLFWPNGLTIDYAGRRMYWVDAKHHVIERANLDG 234 (349)
T ss_dssp ---EEETTTTEEEEEECS--S-SCEEEEEETTSCS-CE--ESC-CSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTS
T ss_pred ---EEecCcCeEEEeccC--C-CCEEEEEeCCCCC-cE--EEE-ECCCCCcceEEEeCCCCEEEEEECCCCEEEEEeCCC
Confidence 333 5777766542 2 23455544 311 11 111 112333433 33 2455666543 45677777765
Q ss_pred CeEE
Q 039662 335 QEMR 338 (366)
Q Consensus 335 ~~~~ 338 (366)
...+
T Consensus 235 ~~~~ 238 (349)
T 3v64_C 235 SHRK 238 (349)
T ss_dssp CSCE
T ss_pred CceE
Confidence 4433
No 130
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=33.36 E-value=2.1e+02 Score=23.77 Aligned_cols=190 Identities=14% Similarity=0.146 Sum_probs=93.0
Q ss_pred eecc-eEEEeecCCeEEEEeCCCcceeecCCCCCCCCCcccccceeeEEeecCCCCCeEEEEEEeeecccCCCCCCcceE
Q 039662 104 PYDG-IFCLLKSHTLINLWNVSLNEYRVIPECRPRLPLYTKTHYANVALGLDPVTKDFKLVLILTLWNDHRDSFHDFSHV 182 (366)
Q Consensus 104 s~~G-Ll~~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~ 182 (366)
+.+| +++....++.+.+||..+++......... .......+.+.+..+ + ++ ... .+ -.+
T Consensus 106 ~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~-------~~~~i~~~~~~~~~~-~-l~-~~~-----~d-----g~v 165 (337)
T 1gxr_A 106 LPDGCTLIVGGEASTLSIWDLAAPTPRIKAELTS-------SAPACYALAISPDSK-V-CF-SCC-----SD-----GNI 165 (337)
T ss_dssp CTTSSEEEEEESSSEEEEEECCCC--EEEEEEEC-------SSSCEEEEEECTTSS-E-EE-EEE-----TT-----SCE
T ss_pred cCCCCEEEEEcCCCcEEEEECCCCCcceeeeccc-------CCCceEEEEECCCCC-E-EE-EEe-----CC-----CcE
Confidence 3344 44444555669999998876432221111 011235566666432 2 22 222 02 267
Q ss_pred EEEEcCCCceeecCCCccccceeecccceEEE--CceEEEEEecCCCceEEEEEeCCCceee-EeCCCCCCCCCCccccc
Q 039662 183 AVYKFSTNSWRDLEGFEMRYDYMVDRIFNVYL--NGFCYWVVCRPDYSKAILSFSMSDEVFE-EMEGPSVPQSTTYYQSV 259 (366)
Q Consensus 183 ~vyss~~~~W~~~~~~~~~~~~~~~~~~~v~~--~G~lywl~~~~~~~~~Il~fD~~~~~~~-~i~~P~~~~~~~~~~~l 259 (366)
.+|+.+++.-... +..... ....+.+ +|.....+. . ...|..+|+.+.+.. .+..+.. ...+
T Consensus 166 ~~~d~~~~~~~~~--~~~~~~----~i~~~~~~~~~~~l~~~~-~--dg~i~~~d~~~~~~~~~~~~~~~------v~~~ 230 (337)
T 1gxr_A 166 AVWDLHNQTLVRQ--FQGHTD----GASCIDISNDGTKLWTGG-L--DNTVRSWDLREGRQLQQHDFTSQ------IFSL 230 (337)
T ss_dssp EEEETTTTEEEEE--ECCCSS----CEEEEEECTTSSEEEEEE-T--TSEEEEEETTTTEEEEEEECSSC------EEEE
T ss_pred EEEeCCCCceeee--eecccC----ceEEEEECCCCCEEEEEe-c--CCcEEEEECCCCceEeeecCCCc------eEEE
Confidence 8888887643222 011100 1112222 454444432 2 346889999887643 2332211 1112
Q ss_pred cccceeeEecCeEEEEEeCCCCCEEEEEEee-CCeeeEEEEecCCCcceeeEEEeeCCeEEEE-EcCCeEEEEECCCCeE
Q 039662 260 KTPWMLGTYDDCLSLLYSDSFAHTFELWTMT-GGNWTKHSTFGPFIETYQPIGFWRKGEFFLE-SSDKRVVLYDSTYQEM 337 (366)
Q Consensus 260 ~~~~~~~~~~G~L~~~~~~~~~~~~~IW~l~-~~~W~~~~~i~~~~~~~~~~~~~~~g~i~~~-~~~~~~~~yd~~~~~~ 337 (366)
...-+|+..++.. ....+.+|-+. +.. ..+........-+.+..++..++. ..++.+..||+++++.
T Consensus 231 -----~~s~~~~~l~~~~--~~~~i~~~~~~~~~~----~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~ 299 (337)
T 1gxr_A 231 -----GYCPTGEWLAVGM--ESSNVEVLHVNKPDK----YQLHLHESCVLSLKFAYCGKWFVSTGKDNLLNAWRTPYGAS 299 (337)
T ss_dssp -----EECTTSSEEEEEE--TTSCEEEEETTSSCE----EEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCE
T ss_pred -----EECCCCCEEEEEc--CCCcEEEEECCCCCe----EEEcCCccceeEEEECCCCCEEEEecCCCcEEEEECCCCeE
Confidence 0222555555444 35678888877 332 122222222334455566765544 4588899999998876
Q ss_pred EE
Q 039662 338 RD 339 (366)
Q Consensus 338 ~~ 339 (366)
..
T Consensus 300 ~~ 301 (337)
T 1gxr_A 300 IF 301 (337)
T ss_dssp EE
T ss_pred EE
Confidence 54
No 131
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=33.29 E-value=2e+02 Score=23.50 Aligned_cols=194 Identities=10% Similarity=0.038 Sum_probs=95.9
Q ss_pred eeecceEEEeec-CCeEEEEeCCCcceeecCCCCCCCCCcccccceeeEEeecCCCCCeEEEEEEeeecccCCCCCCcce
Q 039662 103 GPYDGIFCLLKS-HTLINLWNVSLNEYRVIPECRPRLPLYTKTHYANVALGLDPVTKDFKLVLILTLWNDHRDSFHDFSH 181 (366)
Q Consensus 103 ~s~~GLl~~~~~-~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~~~~~ 181 (366)
+..+|.|...+. .+++.++++.++....+-.... ....++.+|+..+ +++.... ..-.
T Consensus 44 d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~---------~~p~~ia~d~~~~--~lyv~d~----------~~~~ 102 (267)
T 1npe_A 44 DCVDKVVYWTDISEPSIGRASLHGGEPTTIIRQDL---------GSPEGIALDHLGR--TIFWTDS----------QLDR 102 (267)
T ss_dssp ETTTTEEEEEETTTTEEEEEESSSCCCEEEECTTC---------CCEEEEEEETTTT--EEEEEET----------TTTE
T ss_pred ecCCCEEEEEECCCCEEEEEecCCCCcEEEEECCC---------CCccEEEEEecCC--eEEEEEC----------CCCE
Confidence 445677766664 4568888887765443322111 1235777887544 2332221 1126
Q ss_pred EEEEEcCCCceeecCCCccccceeecccceEEE---CceEEEEEecCCCceEEEEEeCCCceeeEeCCCCCCCCCCcccc
Q 039662 182 VAVYKFSTNSWRDLEGFEMRYDYMVDRIFNVYL---NGFCYWVVCRPDYSKAILSFSMSDEVFEEMEGPSVPQSTTYYQS 258 (366)
Q Consensus 182 ~~vyss~~~~W~~~~~~~~~~~~~~~~~~~v~~---~G~lywl~~~~~~~~~Il~fD~~~~~~~~i~~P~~~~~~~~~~~ 258 (366)
+.+++.....-+.+. +... ....++.+ +|.+||.... .....|..++++......+.- .... ....
T Consensus 103 I~~~~~~g~~~~~~~--~~~~----~~P~~i~vd~~~g~lyv~~~~-~~~~~I~~~~~dg~~~~~~~~-~~~~---~P~g 171 (267)
T 1npe_A 103 IEVAKMDGTQRRVLF--DTGL----VNPRGIVTDPVRGNLYWTDWN-RDNPKIETSHMDGTNRRILAQ-DNLG---LPNG 171 (267)
T ss_dssp EEEEETTSCSCEEEE--CSSC----SSEEEEEEETTTTEEEEEECC-SSSCEEEEEETTSCCCEEEEC-TTCS---CEEE
T ss_pred EEEEEcCCCCEEEEE--ECCC----CCccEEEEeeCCCEEEEEECC-CCCcEEEEEecCCCCcEEEEE-CCCC---CCcE
Confidence 677777543322221 1110 11233333 6899998521 113578888887654443311 1110 1112
Q ss_pred ccccceeeEe--cCeEEEEEeCCCCCEEEEEEee-CCeeeEEEEecCCCcceeeEEEee-CCeEEEEEc-CCeEEEEECC
Q 039662 259 VKTPWMLGTY--DDCLSLLYSDSFAHTFELWTMT-GGNWTKHSTFGPFIETYQPIGFWR-KGEFFLESS-DKRVVLYDST 333 (366)
Q Consensus 259 l~~~~~~~~~--~G~L~~~~~~~~~~~~~IW~l~-~~~W~~~~~i~~~~~~~~~~~~~~-~g~i~~~~~-~~~~~~yd~~ 333 (366)
+ ... ++.|+++.. .... |++.+ +..- ....+. ....|.++.. ++.+++... .+++..+|++
T Consensus 172 i------a~d~~~~~lyv~d~--~~~~--I~~~~~~g~~-~~~~~~---~~~~P~gi~~d~~~lyva~~~~~~v~~~d~~ 237 (267)
T 1npe_A 172 L------TFDAFSSQLCWVDA--GTHR--AECLNPAQPG-RRKVLE---GLQYPFAVTSYGKNLYYTDWKTNSVIAMDLA 237 (267)
T ss_dssp E------EEETTTTEEEEEET--TTTE--EEEEETTEEE-EEEEEE---CCCSEEEEEEETTEEEEEETTTTEEEEEETT
T ss_pred E------EEcCCCCEEEEEEC--CCCE--EEEEecCCCc-eEEEec---CCCCceEEEEeCCEEEEEECCCCeEEEEeCC
Confidence 2 322 467877765 3343 45555 2111 111111 2234444433 456776654 5799999999
Q ss_pred CCeE-EEEEE
Q 039662 334 YQEM-RDIRI 342 (366)
Q Consensus 334 ~~~~-~~i~~ 342 (366)
+++. +.+..
T Consensus 238 ~g~~~~~i~~ 247 (267)
T 1npe_A 238 ISKEMDTFHP 247 (267)
T ss_dssp TTEEEEEECC
T ss_pred CCCceEEEcc
Confidence 8764 45543
No 132
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=33.08 E-value=2.2e+02 Score=23.86 Aligned_cols=70 Identities=7% Similarity=0.095 Sum_probs=41.1
Q ss_pred cCeEEEEEeCCCCCEEEEEEee-CCeee-EEEEecCCCcceeeEEEeeCCe-EEE-EEcCCeEEEEEC-CCCeEEEEE
Q 039662 269 DDCLSLLYSDSFAHTFELWTMT-GGNWT-KHSTFGPFIETYQPIGFWRKGE-FFL-ESSDKRVVLYDS-TYQEMRDIR 341 (366)
Q Consensus 269 ~G~L~~~~~~~~~~~~~IW~l~-~~~W~-~~~~i~~~~~~~~~~~~~~~g~-i~~-~~~~~~~~~yd~-~~~~~~~i~ 341 (366)
+|.+.++.. ....+.||-++ +..-. ......+. ....-+.+..++. .++ ...++.+..||+ ++++...+.
T Consensus 22 ~~~~l~~~~--~d~~v~iw~~~~~~~~~~~~~~~~~~-~~v~~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~ 96 (342)
T 1yfq_A 22 SKSLLLITS--WDGSLTVYKFDIQAKNVDLLQSLRYK-HPLLCCNFIDNTDLQIYVGTVQGEILKVDLIGSPSFQALT 96 (342)
T ss_dssp GGTEEEEEE--TTSEEEEEEEETTTTEEEEEEEEECS-SCEEEEEEEESSSEEEEEEETTSCEEEECSSSSSSEEECB
T ss_pred CCCEEEEEc--CCCeEEEEEeCCCCccccceeeeecC-CceEEEEECCCCCcEEEEEcCCCeEEEEEeccCCceEecc
Confidence 555544444 45789999998 33111 22222232 2233445566777 544 445889999999 888775543
No 133
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=32.81 E-value=15 Score=32.76 Aligned_cols=113 Identities=7% Similarity=-0.088 Sum_probs=0.0
Q ss_pred cccceEEECceEEEEEecCCCceEEEEEeCCCcee-eEeCCCCCCCCCCccccccccceeeEecCeEEEEEeCCCCCEEE
Q 039662 207 DRIFNVYLNGFCYWVVCRPDYSKAILSFSMSDEVF-EEMEGPSVPQSTTYYQSVKTPWMLGTYDDCLSLLYSDSFAHTFE 285 (366)
Q Consensus 207 ~~~~~v~~~G~lywl~~~~~~~~~Il~fD~~~~~~-~~i~~P~~~~~~~~~~~l~~~~~~~~~~G~L~~~~~~~~~~~~~ 285 (366)
....++..+|.+|... .++ .|.++|.++++. ...+. ....... ...+|++.+... ....+.
T Consensus 1 g~ssP~v~~~~v~~gs--~dg--~v~a~d~~tG~~~W~~~~-~~~~s~p-----------~~~~g~~~v~~s--~dg~l~ 62 (369)
T 2hz6_A 1 GSSTVTLPETLLFVST--LDG--SLHAVSKRTGSIKWTLKE-DPVLQVP-----------THVEEPAFLPDP--NDGSLY 62 (369)
T ss_dssp -------CTTEEEEEE--TTS--EEEEEETTTCCEEEEEEC-CCSCCCC----------------CCEEECT--TTCCEE
T ss_pred CCCCCeeeCCEEEEEc--CCC--EEEEEECCCCCEEEEecC-CCceecc-----------eEcCCCEEEEeC--CCCEEE
Q ss_pred EEEee-C-CeeeEEEEecCCCcceeeEEEeeCCeEEEEEcCCeEEEEECCCCeEEE
Q 039662 286 LWTMT-G-GNWTKHSTFGPFIETYQPIGFWRKGEFFLESSDKRVVLYDSTYQEMRD 339 (366)
Q Consensus 286 IW~l~-~-~~W~~~~~i~~~~~~~~~~~~~~~g~i~~~~~~~~~~~yd~~~~~~~~ 339 (366)
.|-.+ | ..|......+. .......+..++.+++...++.++.+|.+|++..+
T Consensus 63 a~d~~tG~~~w~~~~~~~~--~~~~sp~~~~~~~v~~g~~dg~v~a~D~~tG~~~w 116 (369)
T 2hz6_A 63 TLGSKNNEGLTKLPFTIPE--LVQASPCRSSDGILYMGKKQDIWYVIDLLTGEKQQ 116 (369)
T ss_dssp EC-----CCSEECSCCHHH--HHTTCSCC-----CCCCEEEEEEEEECCC------
T ss_pred EEECCCCceeeeeeccCcc--ccccCceEecCCEEEEEeCCCEEEEEECCCCcEEE
No 134
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=32.80 E-value=2.2e+02 Score=23.86 Aligned_cols=107 Identities=8% Similarity=0.043 Sum_probs=53.4
Q ss_pred CceEEEEEecCCCceEEEEEeCCCcee-eEeCCCCCCCCCCccccccccceeeEecCe-EEEEEeCCCCCEEEEEEeeCC
Q 039662 215 NGFCYWVVCRPDYSKAILSFSMSDEVF-EEMEGPSVPQSTTYYQSVKTPWMLGTYDDC-LSLLYSDSFAHTFELWTMTGG 292 (366)
Q Consensus 215 ~G~lywl~~~~~~~~~Il~fD~~~~~~-~~i~~P~~~~~~~~~~~l~~~~~~~~~~G~-L~~~~~~~~~~~~~IW~l~~~ 292 (366)
+|.+|.... ....|..+|+.+.+. ..++++.... . ..+ ...-+|+ +++... ....+.+|-++..
T Consensus 10 ~~~~~v~~~---~~~~v~~~d~~~~~~~~~~~~~~~~~--~--~~~-----~~s~dg~~~~v~~~--~~~~i~~~d~~t~ 75 (349)
T 1jmx_B 10 GHEYMIVTN---YPNNLHVVDVASDTVYKSCVMPDKFG--P--GTA-----MMAPDNRTAYVLNN--HYGDIYGIDLDTC 75 (349)
T ss_dssp TCEEEEEEE---TTTEEEEEETTTTEEEEEEECSSCCS--S--CEE-----EECTTSSEEEEEET--TTTEEEEEETTTT
T ss_pred CCEEEEEeC---CCCeEEEEECCCCcEEEEEecCCCCC--C--cee-----EECCCCCEEEEEeC--CCCcEEEEeCCCC
Confidence 455555442 234799999998776 3456654111 1 111 0223565 444442 4456666665533
Q ss_pred eeeEEEEecCC----CcceeeEEEeeCCeEEEE-Ec------------CCeEEEEECCCC
Q 039662 293 NWTKHSTFGPF----IETYQPIGFWRKGEFFLE-SS------------DKRVVLYDSTYQ 335 (366)
Q Consensus 293 ~W~~~~~i~~~----~~~~~~~~~~~~g~i~~~-~~------------~~~~~~yd~~~~ 335 (366)
+-.....+... ......+.+..+|+.++. .. .+.+..||++++
T Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~i~~~d~~~~ 135 (349)
T 1jmx_B 76 KNTFHANLSSVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADG 135 (349)
T ss_dssp EEEEEEESCCSTTEEEECSSCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEEGGGG
T ss_pred cEEEEEEcccccccccccccceEECCCCCEEEEEcccccccccccccCCCeEEEEECCCc
Confidence 22222222211 001233455667764443 32 378999998874
No 135
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=32.60 E-value=2.2e+02 Score=23.92 Aligned_cols=63 Identities=13% Similarity=0.193 Sum_probs=36.9
Q ss_pred CeEEEEEeCCCCCEEEEEEee-CC-eeeEEEEecCC--CcceeeEEEeeCCeEEEE-EcCCeEEEEECCC
Q 039662 270 DCLSLLYSDSFAHTFELWTMT-GG-NWTKHSTFGPF--IETYQPIGFWRKGEFFLE-SSDKRVVLYDSTY 334 (366)
Q Consensus 270 G~L~~~~~~~~~~~~~IW~l~-~~-~W~~~~~i~~~--~~~~~~~~~~~~g~i~~~-~~~~~~~~yd~~~ 334 (366)
|++.++.. ....+.||-++ +. .......+... .....-+.+..++..++. ..++.+..||+.+
T Consensus 299 ~~~l~~~~--~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~ 366 (366)
T 3k26_A 299 QKMLALGN--QVGKLYVWDLEVEDPHKAKCTTLTHHKCGAAIRQTSFSRDSSILIAVCDDASIWRWDRLR 366 (366)
T ss_dssp SSEEEEEC--TTSCEEEEECCSSSGGGCEEEEECCTTCCSCEEEEEECTTSSEEEEEETTSEEEEEEC--
T ss_pred CcEEEEEe--cCCcEEEEECCCCCCccccceEEcccccCCceEEEEeCCCCCeEEEEeCCCEEEEEEecC
Confidence 66555554 45789999988 42 22244444432 222344555667776554 4578999999864
No 136
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=31.93 E-value=2e+02 Score=25.14 Aligned_cols=70 Identities=14% Similarity=0.162 Sum_probs=42.8
Q ss_pred CeEEEEEe-CCC-----CCEEEEEEeeCCeeeEEEEecCCCcceeeEEEeeCCeEEEEEcCCeEEEEECCCCeEEEEE
Q 039662 270 DCLSLLYS-DSF-----AHTFELWTMTGGNWTKHSTFGPFIETYQPIGFWRKGEFFLESSDKRVVLYDSTYQEMRDIR 341 (366)
Q Consensus 270 G~L~~~~~-~~~-----~~~~~IW~l~~~~W~~~~~i~~~~~~~~~~~~~~~g~i~~~~~~~~~~~yd~~~~~~~~i~ 341 (366)
++|+++.. +.. ...-.||+.+-.....+.+++... ..-+.+..+|+.++....+.+..||.++++++.+.
T Consensus 266 ~~lyv~~~~~~~~~~~~~~~~~v~viD~~t~~~v~~i~~~~--p~~ia~spdg~~l~v~n~~~v~v~D~~t~~l~~~~ 341 (361)
T 2oiz_A 266 GRMYVFMHPDGKEGTHKFPAAEIWVMDTKTKQRVARIPGRD--ALSMTIDQQRNLMLTLDGGNVNVYDISQPEPKLLR 341 (361)
T ss_dssp TEEEEEEESSCCTTCTTCCCSEEEEEETTTTEEEEEEECTT--CCEEEEETTTTEEEEECSSCEEEEECSSSSCEEEE
T ss_pred CeEEEEEccCCCcccccCCCceEEEEECCCCcEEEEEecCC--eeEEEECCCCCEEEEeCCCeEEEEECCCCcceeeE
Confidence 56776654 111 123466766622234566666543 45566778887666655688999999998555554
No 137
>1ddw_A GLGF-domain protein homer; pleckstrin homology domain fold, signaling protein; 1.70A {Rattus norvegicus} SCOP: b.55.1.4 PDB: 1ddv_A 2p8v_A 1i7a_A*
Probab=31.10 E-value=1.1e+02 Score=22.42 Aligned_cols=39 Identities=5% Similarity=0.078 Sum_probs=27.5
Q ss_pred eEEEEeCCCc-ceeecCCCCCCCCCcccccceeeEEeecCCCCCeEEEEEE
Q 039662 117 LINLWNVSLN-EYRVIPECRPRLPLYTKTHYANVALGLDPVTKDFKLVLIL 166 (366)
Q Consensus 117 ~~~V~NP~T~-~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~ 166 (366)
.+++.||.|+ .|...-... ..+.+-+|+..+.|+|+.+.
T Consensus 12 ~V~~~D~~tk~~W~p~g~~~-----------~~V~~~~d~~~~~yRIv~~~ 51 (120)
T 1ddw_A 12 HVFQIDPNTKKNWVPTSKHA-----------VTVSYFYDSTRNVYRIISLD 51 (120)
T ss_dssp EEEEECTTTSCSEEESCSSC-----------EEEEEEEETTTTEEEEEEEE
T ss_pred EEEEEcCCCCCceEeCCCCc-----------eEEEEEEcCCCCEEEEEEcc
Confidence 3888999996 885432211 34667888888899998754
No 138
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=30.33 E-value=2.8e+02 Score=24.39 Aligned_cols=59 Identities=17% Similarity=0.309 Sum_probs=36.8
Q ss_pred CCEEEEEEeeCCeeeEEEEecCCCcceeeEEEeeCCeEEEE-EcCCeEEEEECCCCeEEE
Q 039662 281 AHTFELWTMTGGNWTKHSTFGPFIETYQPIGFWRKGEFFLE-SSDKRVVLYDSTYQEMRD 339 (366)
Q Consensus 281 ~~~~~IW~l~~~~W~~~~~i~~~~~~~~~~~~~~~g~i~~~-~~~~~~~~yd~~~~~~~~ 339 (366)
...+.||-.+.++-.+...+........-+.+..+|..++. ..++.+..||+++++...
T Consensus 124 d~tV~lWd~~tg~~~~~~~~~~~~~~V~sv~fspdg~~lasgs~Dg~v~iWd~~~~~~~~ 183 (420)
T 4gga_A 124 DNSVYLWSASSGDILQLLQMEQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQKRLR 183 (420)
T ss_dssp TTEEEEEETTTCCEEEEEECCSTTCCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEE
T ss_pred CCEEEEEECCCCCEEEEEEecCCCCcEEEEEECCCCCEEEEEECCCeEEEEEcCCCcEEE
Confidence 36899997763333444444332222344556677776554 458889999999886543
No 139
>1xod_A Spred1; sprouty, EVH1, peptide-binding, signaling protein; 1.15A {Xenopus tropicalis} SCOP: b.55.1.4 PDB: 1tj6_A
Probab=30.28 E-value=61 Score=23.75 Aligned_cols=41 Identities=12% Similarity=-0.028 Sum_probs=20.8
Q ss_pred EEEEeCCCcceeecCCCCCCCCCcccccceeeEEee---cCCCCCeEEEEEE
Q 039662 118 INLWNVSLNEYRVIPECRPRLPLYTKTHYANVALGL---DPVTKDFKLVLIL 166 (366)
Q Consensus 118 ~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~---d~~~~~ykvv~~~ 166 (366)
++..||.|+.|...-... .+...+.+.. |...+.|+|+...
T Consensus 13 V~~~d~~~~~W~p~~~g~--------ls~v~i~~~~~~~d~~~~~yrIv~~~ 56 (118)
T 1xod_A 13 VMTRDDSSGGWLQLGGGG--------LSSVTVSKTLQPGDSGGTEFLVHGER 56 (118)
T ss_dssp EEEECSSSSCEEEGGGCC--------CEEEEEECC---------CCEEEEEE
T ss_pred EeeEcCCCCCEeeCCCCC--------cccEEEEEecCcCCCCCCEEEEEEEE
Confidence 888999999876443221 1111122222 4566789998765
No 140
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=30.23 E-value=2.1e+02 Score=25.13 Aligned_cols=114 Identities=5% Similarity=-0.062 Sum_probs=56.5
Q ss_pred cceEEEeecCCeEEEEeCCCcceeec-CCCCCCCCCcccccceeeEEeecCCCCCeEEEEEEeeecccCCCCCCcceEEE
Q 039662 106 DGIFCLLKSHTLINLWNVSLNEYRVI-PECRPRLPLYTKTHYANVALGLDPVTKDFKLVLILTLWNDHRDSFHDFSHVAV 184 (366)
Q Consensus 106 ~GLl~~~~~~~~~~V~NP~T~~~~~L-P~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~~v 184 (366)
+|+|++...++.++-+|..||+.+.- .......+ ..........+-.++.+.. ..++ .+..
T Consensus 10 ~~~V~v~t~dG~l~Ald~~tG~~~W~~~~~~~~p~---------~~~~~~~~~~~~~~~vv~p----~~dG-----~l~a 71 (339)
T 2be1_A 10 SDILIAADVEGGLHAVDRRNGHIIWSIEPENFQPL---------IEIQEPSRLETYETLIIEP----FGDG-----NIYY 71 (339)
T ss_dssp EEEEEEEETTSCEEEEETTTTEEEEEECGGGSCCS---------EECCCSCTTTSSEEEEECC----STTT-----EEEE
T ss_pred CCEEEEEeCCCeEEEEECCCCcEEEEecCCccCCc---------EEecCCccccCCcEEEEEE----CCCC-----EEEE
Confidence 56788777777788889888877642 22110000 0000000001112333321 1122 5567
Q ss_pred EEcCCCceeecCCCcccc--ceeecccceEE-------ECceEEEEEecCCCceEEEEEeCCCcee
Q 039662 185 YKFSTNSWRDLEGFEMRY--DYMVDRIFNVY-------LNGFCYWVVCRPDYSKAILSFSMSDEVF 241 (366)
Q Consensus 185 yss~~~~W~~~~~~~~~~--~~~~~~~~~v~-------~~G~lywl~~~~~~~~~Il~fD~~~~~~ 241 (366)
|+..++.|+....++... ..+.....+|. .+|.+|.-.. ...+.++|+.+++-
T Consensus 72 ~~~~~G~~~~~~~~~~lv~~SP~~~~~~pvv~~~~~~~~~g~Vy~Gs~----~g~l~ald~~tG~~ 133 (339)
T 2be1_A 72 FNAHQGLQKLPLSIRQLVSTSPLHLKTNIVVNDSGKIVEDEKVYTGSM----RTIMYTINMLNGEI 133 (339)
T ss_dssp EETTTEEEEEEEEHHHHHTTCSEEEECC----------CCEEEEECEE----EEEEEEEETTTCCE
T ss_pred EECCCCcEEeeeccccceeccccccCCCceeecccccccCCEEEEEec----CCEEEEEECCCCcE
Confidence 777777665321111100 01112345555 7999999863 35799999998764
No 141
>2dk7_A Transcription elongation regulator 1; structural genomics, WW domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=30.11 E-value=50 Score=21.89 Aligned_cols=21 Identities=24% Similarity=0.300 Sum_probs=16.3
Q ss_pred eEEEEEcCCeEEEEECCCCeE
Q 039662 317 EFFLESSDKRVVLYDSTYQEM 337 (366)
Q Consensus 317 ~i~~~~~~~~~~~yd~~~~~~ 337 (366)
-......++++++||..|++-
T Consensus 22 W~~v~T~dGR~fyyN~~Tk~S 42 (73)
T 2dk7_A 22 WCVVWTGDERVFFYNPTTRLS 42 (73)
T ss_dssp CEEEEESSSCEEEEETTTTEE
T ss_pred cEEEECCCCCEEEecCcccce
Confidence 345556699999999999864
No 142
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=29.81 E-value=2.6e+02 Score=23.78 Aligned_cols=199 Identities=10% Similarity=-0.025 Sum_probs=96.0
Q ss_pred eeecceEEEee-cCCeEEEEeCCCcceeecCCCCCCCCCcccccceeeEEeecCCCCCeEEEEEEeeecccCCCCCCcce
Q 039662 103 GPYDGIFCLLK-SHTLINLWNVSLNEYRVIPECRPRLPLYTKTHYANVALGLDPVTKDFKLVLILTLWNDHRDSFHDFSH 181 (366)
Q Consensus 103 ~s~~GLl~~~~-~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~~~~~ 181 (366)
...+|.+...+ ....++++||.+++...++.+. ...++.+++..+ ++.... . .
T Consensus 57 ~~~~~~l~~~d~~~~~i~~~d~~~~~~~~~~~~~-----------~v~~i~~~~dg~---l~v~~~------~------g 110 (326)
T 2ghs_A 57 DPASGTAWWFNILERELHELHLASGRKTVHALPF-----------MGSALAKISDSK---QLIASD------D------G 110 (326)
T ss_dssp ETTTTEEEEEEGGGTEEEEEETTTTEEEEEECSS-----------CEEEEEEEETTE---EEEEET------T------E
T ss_pred eCCCCEEEEEECCCCEEEEEECCCCcEEEEECCC-----------cceEEEEeCCCe---EEEEEC------C------C
Confidence 44445555554 3456999999998876554211 124556665432 222211 1 4
Q ss_pred EEEEEcCCCceeecCCCccccceeecccceEEE--CceEEEEEecC---CCceEEEEEeCCCceeeEeCCCCCCCCCCcc
Q 039662 182 VAVYKFSTNSWRDLEGFEMRYDYMVDRIFNVYL--NGFCYWVVCRP---DYSKAILSFSMSDEVFEEMEGPSVPQSTTYY 256 (366)
Q Consensus 182 ~~vyss~~~~W~~~~~~~~~~~~~~~~~~~v~~--~G~lywl~~~~---~~~~~Il~fD~~~~~~~~i~~P~~~~~~~~~ 256 (366)
+.+|+..++..+.+...+..... .....+.+ +|.+|...... .....|..+| +++...+. ..... .
T Consensus 111 l~~~d~~~g~~~~~~~~~~~~~~--~~~~~i~~d~~G~l~v~~~~~~~~~~~~~l~~~~--~g~~~~~~--~~~~~---~ 181 (326)
T 2ghs_A 111 LFLRDTATGVLTLHAELESDLPG--NRSNDGRMHPSGALWIGTMGRKAETGAGSIYHVA--KGKVTKLF--ADISI---P 181 (326)
T ss_dssp EEEEETTTCCEEEEECSSTTCTT--EEEEEEEECTTSCEEEEEEETTCCTTCEEEEEEE--TTEEEEEE--EEESS---E
T ss_pred EEEEECCCCcEEEEeeCCCCCCC--CCCCCEEECCCCCEEEEeCCCcCCCCceEEEEEe--CCcEEEee--CCCcc---c
Confidence 67788888877665321110000 00122222 67765543211 1235789999 45554431 10000 0
Q ss_pred ccccccceeeEecCe-EEEEEeCCCCCEEEEEEee--CC-eee--E-EEEecCCCcceeeEEEeeCCeEEEEEc-CCeEE
Q 039662 257 QSVKTPWMLGTYDDC-LSLLYSDSFAHTFELWTMT--GG-NWT--K-HSTFGPFIETYQPIGFWRKGEFFLESS-DKRVV 328 (366)
Q Consensus 257 ~~l~~~~~~~~~~G~-L~~~~~~~~~~~~~IW~l~--~~-~W~--~-~~~i~~~~~~~~~~~~~~~g~i~~~~~-~~~~~ 328 (366)
..+ ...-+|+ |+++.. ....+.+|-++ ++ ... + ...+........-+.+..+|.+++... .+.+.
T Consensus 182 ~~i-----~~s~dg~~lyv~~~--~~~~I~~~d~~~~~Gl~~~~~~~~~~~~~~~~~p~gi~~d~~G~lwva~~~~~~v~ 254 (326)
T 2ghs_A 182 NSI-----CFSPDGTTGYFVDT--KVNRLMRVPLDARTGLPTGKAEVFIDSTGIKGGMDGSVCDAEGHIWNARWGEGAVD 254 (326)
T ss_dssp EEE-----EECTTSCEEEEEET--TTCEEEEEEBCTTTCCBSSCCEEEEECTTSSSEEEEEEECTTSCEEEEEETTTEEE
T ss_pred CCe-----EEcCCCCEEEEEEC--CCCEEEEEEcccccCCcccCceEEEECCCCCCCCCeeEECCCCCEEEEEeCCCEEE
Confidence 112 0122564 555433 33455555543 12 221 1 112221112223344455677877754 57899
Q ss_pred EEECCCCeEEEEEEe
Q 039662 329 LYDSTYQEMRDIRIT 343 (366)
Q Consensus 329 ~yd~~~~~~~~i~~~ 343 (366)
.||++.+.++.+...
T Consensus 255 ~~d~~g~~~~~i~~~ 269 (326)
T 2ghs_A 255 RYDTDGNHIARYEVP 269 (326)
T ss_dssp EECTTCCEEEEEECS
T ss_pred EECCCCCEEEEEECC
Confidence 999977777776644
No 143
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=29.25 E-value=2.5e+02 Score=23.43 Aligned_cols=189 Identities=12% Similarity=0.024 Sum_probs=92.3
Q ss_pred eEEEeecCCeEEEEeC-CCcceeecCCCCCCCCCcccccceeeEEeecCCCCCeEEEEEEeeecccCCCCCCcceEEEEE
Q 039662 108 IFCLLKSHTLINLWNV-SLNEYRVIPECRPRLPLYTKTHYANVALGLDPVTKDFKLVLILTLWNDHRDSFHDFSHVAVYK 186 (366)
Q Consensus 108 Ll~~~~~~~~~~V~NP-~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~~vys 186 (366)
+|+....++.+.+||. .+++...+..... ......+.+.+ +. .++.... + -.+.+|+
T Consensus 71 ~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~--------~~~v~~l~~~~--~~-~l~s~~~------d-----~~i~iwd 128 (342)
T 1yfq_A 71 QIYVGTVQGEILKVDLIGSPSFQALTNNEA--------NLGICRICKYG--DD-KLIAASW------D-----GLIEVID 128 (342)
T ss_dssp EEEEEETTSCEEEECSSSSSSEEECBSCCC--------CSCEEEEEEET--TT-EEEEEET------T-----SEEEEEC
T ss_pred EEEEEcCCCeEEEEEeccCCceEeccccCC--------CCceEEEEeCC--CC-EEEEEcC------C-----CeEEEEc
Confidence 3555555667999999 9988766654211 11235667776 33 2332221 2 1667777
Q ss_pred cCCC---c----eeecCCCccccceeecccceEEECceEEEEEecCCCceEEEEEeCCC-ce--eeEeCCCCCCCCCCcc
Q 039662 187 FSTN---S----WRDLEGFEMRYDYMVDRIFNVYLNGFCYWVVCRPDYSKAILSFSMSD-EV--FEEMEGPSVPQSTTYY 256 (366)
Q Consensus 187 s~~~---~----W~~~~~~~~~~~~~~~~~~~v~~~G~lywl~~~~~~~~~Il~fD~~~-~~--~~~i~~P~~~~~~~~~ 256 (366)
.++. . .+.+..+... ....++.+++.-...+ .. ...|..+|+.+ .. ......+... ..
T Consensus 129 ~~~~~~~~~~~~~~~~~~~~~~-----~~v~~~~~~~~~l~~~-~~--d~~i~i~d~~~~~~~~~~~~~~~~~~----~i 196 (342)
T 1yfq_A 129 PRNYGDGVIAVKNLNSNNTKVK-----NKIFTMDTNSSRLIVG-MN--NSQVQWFRLPLCEDDNGTIEESGLKY----QI 196 (342)
T ss_dssp HHHHTTBCEEEEESCSSSSSSC-----CCEEEEEECSSEEEEE-ES--TTEEEEEESSCCTTCCCEEEECSCSS----CE
T ss_pred ccccccccccccCCeeeEEeeC-----CceEEEEecCCcEEEE-eC--CCeEEEEECCccccccceeeecCCCC----ce
Confidence 6530 0 2222111111 1112233322222222 12 33688899887 33 3223222211 11
Q ss_pred ccccccceeeEe--cCeEEEEEeCCCCCEEEEEEee-C---CeeeEEEEecCCCc---------ceeeEEEeeCCeEEEE
Q 039662 257 QSVKTPWMLGTY--DDCLSLLYSDSFAHTFELWTMT-G---GNWTKHSTFGPFIE---------TYQPIGFWRKGEFFLE 321 (366)
Q Consensus 257 ~~l~~~~~~~~~--~G~L~~~~~~~~~~~~~IW~l~-~---~~W~~~~~i~~~~~---------~~~~~~~~~~g~i~~~ 321 (366)
..+ ... +|.+.++.. ....+.||-++ + ........+..... ...-+.+..++.+++.
T Consensus 197 ~~i------~~~~~~~~~l~~~~--~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~ 268 (342)
T 1yfq_A 197 RDV------ALLPKEQEGYACSS--IDGRVAVEFFDDQGDDYNSSKRFAFRCHRLNLKDTNLAYPVNSIEFSPRHKFLYT 268 (342)
T ss_dssp EEE------EECSGGGCEEEEEE--TTSEEEEEECCTTCCSTTCTTCEEEECCCCCTTCCSSCCCEEEEEECTTTCCEEE
T ss_pred eEE------EECCCCCCEEEEEe--cCCcEEEEEEcCCCcccccccceeeecccccccccccceeEEEEEEcCCCCEEEE
Confidence 122 222 466555554 46789999887 3 11222333322111 2233455566765544
Q ss_pred -EcCCeEEEEECCCCeEE
Q 039662 322 -SSDKRVVLYDSTYQEMR 338 (366)
Q Consensus 322 -~~~~~~~~yd~~~~~~~ 338 (366)
..++.+..||+++++..
T Consensus 269 ~~~dg~i~vwd~~~~~~~ 286 (342)
T 1yfq_A 269 AGSDGIISCWNLQTRKKI 286 (342)
T ss_dssp EETTSCEEEEETTTTEEE
T ss_pred ecCCceEEEEcCccHhHh
Confidence 45789999999988754
No 144
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=29.01 E-value=2.9e+02 Score=24.13 Aligned_cols=192 Identities=10% Similarity=0.117 Sum_probs=97.9
Q ss_pred eeecceEEEeec-CCeEEEEeCCCcceee-cCCCCCCCCCcccccceeeEEeecCCCCCeEEEEEEeeecccCCCCCCcc
Q 039662 103 GPYDGIFCLLKS-HTLINLWNVSLNEYRV-IPECRPRLPLYTKTHYANVALGLDPVTKDFKLVLILTLWNDHRDSFHDFS 180 (366)
Q Consensus 103 ~s~~GLl~~~~~-~~~~~V~NP~T~~~~~-LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~~~~ 180 (366)
-+.+|-+++... ++.+.+||+.+++... ++... ....++.+++..+ + ++.... .+ -
T Consensus 177 ~~~~~~~~~s~~~d~~v~~~d~~~~~~~~~~~~~~----------~~~~~~~~~~~~~-~-l~~~~~-----~~-----~ 234 (433)
T 3bws_A 177 IPEHNELWVSQMQANAVHVFDLKTLAYKATVDLTG----------KWSKILLYDPIRD-L-VYCSNW-----IS-----E 234 (433)
T ss_dssp EGGGTEEEEEEGGGTEEEEEETTTCCEEEEEECSS----------SSEEEEEEETTTT-E-EEEEET-----TT-----T
T ss_pred EcCCCEEEEEECCCCEEEEEECCCceEEEEEcCCC----------CCeeEEEEcCCCC-E-EEEEec-----CC-----C
Confidence 344666665553 4569999998876553 33111 1225566776543 2 222221 12 2
Q ss_pred eEEEEEcCCCceeecCCCccccceeecccceEEE--CceEEEEEecCC-----CceEEEEEeCCCceeeEe-CCCCCCCC
Q 039662 181 HVAVYKFSTNSWRDLEGFEMRYDYMVDRIFNVYL--NGFCYWVVCRPD-----YSKAILSFSMSDEVFEEM-EGPSVPQS 252 (366)
Q Consensus 181 ~~~vyss~~~~W~~~~~~~~~~~~~~~~~~~v~~--~G~lywl~~~~~-----~~~~Il~fD~~~~~~~~i-~~P~~~~~ 252 (366)
.+.+|+.+++.....- +.... ..++.+ +|...+.+.... ....|..+|+.+++.... ..+..
T Consensus 235 ~i~~~d~~~~~~~~~~--~~~~~-----~~~~~~~~~g~~l~~~~~~~~~~~~~dg~i~~~d~~~~~~~~~~~~~~~--- 304 (433)
T 3bws_A 235 DISVIDRKTKLEIRKT--DKIGL-----PRGLLLSKDGKELYIAQFSASNQESGGGRLGIYSMDKEKLIDTIGPPGN--- 304 (433)
T ss_dssp EEEEEETTTTEEEEEC--CCCSE-----EEEEEECTTSSEEEEEEEESCTTCSCCEEEEEEETTTTEEEEEEEEEEC---
T ss_pred cEEEEECCCCcEEEEe--cCCCC-----ceEEEEcCCCCEEEEEECCCCccccCCCeEEEEECCCCcEEeeccCCCC---
Confidence 6788998877543321 11110 112222 565444442211 235788999988765332 21211
Q ss_pred CCccccccccceeeEecCe-EEEEEeCCCCCEEEEEEeeCCeeeEEEEecCCCcceeeEEEeeCCeEEEE-Ec-------
Q 039662 253 TTYYQSVKTPWMLGTYDDC-LSLLYSDSFAHTFELWTMTGGNWTKHSTFGPFIETYQPIGFWRKGEFFLE-SS------- 323 (366)
Q Consensus 253 ~~~~~~l~~~~~~~~~~G~-L~~~~~~~~~~~~~IW~l~~~~W~~~~~i~~~~~~~~~~~~~~~g~i~~~-~~------- 323 (366)
...+ ...-+|+ |++... ....+.+|-+++. .....+... ....-+.+..+|..++. ..
T Consensus 305 ---~~~~-----~~~~~g~~l~~~~~--~~~~v~v~d~~~~--~~~~~~~~~-~~~~~~~~s~dg~~l~~~~~~~~~~~~ 371 (433)
T 3bws_A 305 ---KRHI-----VSGNTENKIYVSDM--CCSKIEVYDLKEK--KVQKSIPVF-DKPNTIALSPDGKYLYVSCRGPNHPTE 371 (433)
T ss_dssp ---EEEE-----EECSSTTEEEEEET--TTTEEEEEETTTT--EEEEEEECS-SSEEEEEECTTSSEEEEEECCCCCTTT
T ss_pred ---cceE-----EECCCCCEEEEEec--CCCEEEEEECCCC--cEEEEecCC-CCCCeEEEcCCCCEEEEEecCCCcccc
Confidence 1111 0222454 554443 4578888887732 222333332 22334556667765444 33
Q ss_pred --------CCeEEEEECCCCeEEE
Q 039662 324 --------DKRVVLYDSTYQEMRD 339 (366)
Q Consensus 324 --------~~~~~~yd~~~~~~~~ 339 (366)
++.+..||+++++...
T Consensus 372 ~~~~~g~~dg~v~~~d~~~~~~~~ 395 (433)
T 3bws_A 372 GYLKKGLVLGKVYVIDTTTDTVKE 395 (433)
T ss_dssp CTTSCCSSCCEEEEEETTTTEEEE
T ss_pred ccccccccceEEEEEECCCCcEEE
Confidence 2489999999887654
No 145
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=28.93 E-value=2.7e+02 Score=23.73 Aligned_cols=68 Identities=15% Similarity=0.200 Sum_probs=41.4
Q ss_pred cCeEEEEEeCCCCCEEEEEEee-CCeeeEEEEecCCCcceeeEEEeeCCeEEEE-EcCCeEEEEECCCCeEE
Q 039662 269 DDCLSLLYSDSFAHTFELWTMT-GGNWTKHSTFGPFIETYQPIGFWRKGEFFLE-SSDKRVVLYDSTYQEMR 338 (366)
Q Consensus 269 ~G~L~~~~~~~~~~~~~IW~l~-~~~W~~~~~i~~~~~~~~~~~~~~~g~i~~~-~~~~~~~~yd~~~~~~~ 338 (366)
+|++.+... ....+.||-++ +..+.....+........-+.+..++.+++. ..++.+..||.+++.+.
T Consensus 116 ~~~~l~s~s--~D~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~d~~i~~w~~~~~~~~ 185 (345)
T 3fm0_A 116 SGNLLATCS--RDKSVWVWEVDEEDEYECVSVLNSHTQDVKHVVWHPSQELLASASYDDTVKLYREEEDDWV 185 (345)
T ss_dssp TSSEEEEEE--TTSCEEEEEECTTSCEEEEEEECCCCSCEEEEEECSSSSCEEEEETTSCEEEEEEETTEEE
T ss_pred CCCEEEEEE--CCCeEEEEECCCCCCeEEEEEecCcCCCeEEEEECCCCCEEEEEeCCCcEEEEEecCCCEE
Confidence 566555544 45789999988 4555555555432222233455566665544 45788889998887654
No 146
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=28.10 E-value=2.8e+02 Score=23.57 Aligned_cols=68 Identities=10% Similarity=0.124 Sum_probs=39.9
Q ss_pred cCeEEEEEeCCCCCEEEEEEee-C-CeeeEEEEecCCCcceeeEEEeeCCeEEEEEcCCeEEEEECCCCeEE
Q 039662 269 DDCLSLLYSDSFAHTFELWTMT-G-GNWTKHSTFGPFIETYQPIGFWRKGEFFLESSDKRVVLYDSTYQEMR 338 (366)
Q Consensus 269 ~G~L~~~~~~~~~~~~~IW~l~-~-~~W~~~~~i~~~~~~~~~~~~~~~g~i~~~~~~~~~~~yd~~~~~~~ 338 (366)
+|.+.+... ....+.||-+. + ........+........-+.+..++.++....++.+..||+++++..
T Consensus 108 ~~~~l~s~~--~d~~v~iw~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~l~s~s~d~~i~~wd~~~~~~~ 177 (340)
T 1got_B 108 SGNYVACGG--LDNICSIYNLKTREGNVRVSRELAGHTGYLSCCRFLDDNQIVTSSGDTTCALWDIETGQQT 177 (340)
T ss_dssp TSSEEEEEE--TTCEEEEEETTTCSBSCEEEEEEECCSSCEEEEEEEETTEEEEEETTSCEEEEETTTTEEE
T ss_pred CCCEEEEEe--CCCeEEEEECccCCCcceeEEEecCCCccEEEEEECCCCcEEEEECCCcEEEEECCCCcEE
Confidence 444444433 45788999887 2 33333333332222223344456777766667889999999987654
No 147
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=27.97 E-value=3.9e+02 Score=25.22 Aligned_cols=195 Identities=7% Similarity=-0.048 Sum_probs=95.1
Q ss_pred eEEEEeCCC------cceeecC-CCCCCCCCcccccceeeEEeecCCCCCeEEEEEEeeecccCCCCCCcceEEEEEcC-
Q 039662 117 LINLWNVSL------NEYRVIP-ECRPRLPLYTKTHYANVALGLDPVTKDFKLVLILTLWNDHRDSFHDFSHVAVYKFS- 188 (366)
Q Consensus 117 ~~~V~NP~T------~~~~~LP-~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~~vyss~- 188 (366)
.++++|..+ ++.+.|. .... ......+.|..+ +|+..... .....-....+.+++..
T Consensus 162 ~i~~~~~~~~~~~~~~~~~~l~~~~~~----------~~~~~~~SpDG~--~la~~~~~---~~~~~~~~~~i~~~d~~~ 226 (662)
T 3azo_A 162 FLAAVPLDGSAAADRSAVRELSDDAHR----------FVTGPRLSPDGR--QAVWLAWD---HPRMPWEGTELKTARVTE 226 (662)
T ss_dssp EEEEEETTSTTTTCGGGSEESSCSCSS----------EECCCEECTTSS--EEEEEEEC---TTCCTTTCEEEEEEEECT
T ss_pred EEEEEECCCCccccCCceeEEEecCCC----------cccCceECCCCC--EEEEEECC---CCCCCCCCcEEEEEEECC
Confidence 599999998 7777665 3221 113344555432 23323220 00000012467788887
Q ss_pred CCceeecCCCccccceeecccceEE-ECceEEEEEecCCCceEEEEEeCCCceeeEe-CCCCCCCCCC---ccccccccc
Q 039662 189 TNSWRDLEGFEMRYDYMVDRIFNVY-LNGFCYWVVCRPDYSKAILSFSMSDEVFEEM-EGPSVPQSTT---YYQSVKTPW 263 (366)
Q Consensus 189 ~~~W~~~~~~~~~~~~~~~~~~~v~-~~G~lywl~~~~~~~~~Il~fD~~~~~~~~i-~~P~~~~~~~---~~~~l~~~~ 263 (366)
++.+.....+...... ......+ -+|.+|+... .++...|..+|+++.++..+ .......... ....+
T Consensus 227 ~g~~~~~~~l~~~~~~--~~~~~~~spdg~l~~~~~-~~~~~~l~~~~~~~~~~~~l~~~~~~~~~p~w~~~~~~~---- 299 (662)
T 3azo_A 227 DGRFADTRTLLGGPEE--AIAQAEWAPDGSLIVATD-RTGWWNLHRVDPATGAATQLCRREEEFAGPLWTPGMRWF---- 299 (662)
T ss_dssp TSCEEEEEEEEEETTB--CEEEEEECTTSCEEEEEC-TTSSCEEEEECTTTCCEEESSCCSSBSSCCCCSTTCCSE----
T ss_pred CCcccccEEeCCCCCc--eEcceEECCCCeEEEEEC-CCCCeEEEEEECCCCceeecccccccccCccccccCceE----
Confidence 5633322110111000 0011222 2788887763 23345799999988777654 2211111000 00112
Q ss_pred eeeEe-cCeEEEEEeCCCCCEEEEEEee--CCeeeEEEEecCCCcceeeEEEeeCCeEEEEEc-C---CeEEEEECCCCe
Q 039662 264 MLGTY-DDCLSLLYSDSFAHTFELWTMT--GGNWTKHSTFGPFIETYQPIGFWRKGEFFLESS-D---KRVVLYDSTYQE 336 (366)
Q Consensus 264 ~~~~~-~G~L~~~~~~~~~~~~~IW~l~--~~~W~~~~~i~~~~~~~~~~~~~~~g~i~~~~~-~---~~~~~yd~~~~~ 336 (366)
... +|++.+... . ....||.++ +... .++.........+....++.+++... . ..++.+|+++++
T Consensus 300 --~~~~~~~~~~~~~--~-~~~~l~~~d~~~~~~---~~l~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~i~~~d~~~g~ 371 (662)
T 3azo_A 300 --APLANGLIAVVHG--K-GAAVLGILDPESGEL---VDAAGPWTEWAATLTVSGTRAVGVAASPRTAYEVVELDTVTGR 371 (662)
T ss_dssp --EECTTSCEEEEEB--S-SSCEEEEEETTTTEE---EECCSSCCEEEEEEEEETTEEEEEEEETTEEEEEEEEETTTCC
T ss_pred --eEeCCCEEEEEEE--c-CccEEEEEECCCCcE---EEecCCCCeEEEEEecCCCEEEEEEcCCCCCCEEEEEECCCCc
Confidence 333 677766665 3 788999998 3442 33432222222331123345555533 2 368889999988
Q ss_pred EEEEE
Q 039662 337 MRDIR 341 (366)
Q Consensus 337 ~~~i~ 341 (366)
.+.+.
T Consensus 372 ~~~l~ 376 (662)
T 3azo_A 372 ARTIG 376 (662)
T ss_dssp EEEEE
T ss_pred eEEee
Confidence 77764
No 148
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=27.63 E-value=3.2e+02 Score=24.12 Aligned_cols=63 Identities=13% Similarity=0.115 Sum_probs=40.2
Q ss_pred eEEEEEeCCCCCEEEEEEee-C-CeeeEEEEecCCC-cceeeEEEeeCCeEEEEEc------------------CCeEEE
Q 039662 271 CLSLLYSDSFAHTFELWTMT-G-GNWTKHSTFGPFI-ETYQPIGFWRKGEFFLESS------------------DKRVVL 329 (366)
Q Consensus 271 ~L~~~~~~~~~~~~~IW~l~-~-~~W~~~~~i~~~~-~~~~~~~~~~~g~i~~~~~------------------~~~~~~ 329 (366)
.|+++........++||.++ + .......++.... .....+.+..+|.+++... .+++++
T Consensus 128 ~L~Vvnh~~~~s~ielf~~d~~~~~~~~~~~~~g~~~~~pND~~v~~~G~fyvt~~~~ftd~~~~~~e~~~~~~~g~vyr 207 (355)
T 3sre_A 128 YLLVVNHPGSSSTVEVFKFQEEEKSLLHLKTIRHKLLPSVNDIVAVGPEHFYATNDHYFIDPYLKSWEMHLGLAWSFVTY 207 (355)
T ss_dssp EEEEEECSTTCCEEEEEEEETTTTEEEEEEEECCTTCSSEEEEEEEETTEEEEEESCSCSSHHHHHHHHHTTCCCEEEEE
T ss_pred EEEEEECCCCCCeEEEEEEECCCCEEEEEeccccCCCCCCceEEEeCCCCEEecCCcEeCCcccccchhhccCCccEEEE
Confidence 46666554457899999999 3 5556666665321 2234455667788766532 257999
Q ss_pred EECC
Q 039662 330 YDST 333 (366)
Q Consensus 330 yd~~ 333 (366)
||+.
T Consensus 208 ~d~~ 211 (355)
T 3sre_A 208 YSPN 211 (355)
T ss_dssp ECTT
T ss_pred EECC
Confidence 9985
No 149
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=27.28 E-value=2.7e+02 Score=23.21 Aligned_cols=167 Identities=10% Similarity=0.144 Sum_probs=86.4
Q ss_pred eeEEeecCCCCCeEEEEEEeeecccCCCCCCcceEEEEEcCCCceeecCCCccccceeecccceEE-ECceEEEEEecCC
Q 039662 148 NVALGLDPVTKDFKLVLILTLWNDHRDSFHDFSHVAVYKFSTNSWRDLEGFEMRYDYMVDRIFNVY-LNGFCYWVVCRPD 226 (366)
Q Consensus 148 ~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~~vyss~~~~W~~~~~~~~~~~~~~~~~~~v~-~~G~lywl~~~~~ 226 (366)
..|+.+||.++ ++.++.. ....+..++....-++.+ +.. . .....++. .++-.||++ .+
T Consensus 29 lSGla~~~~~~--~L~aV~d----------~~~~I~~ld~~g~v~~~i---~l~--g-~~D~EGIa~~~~g~~~vs--~E 88 (255)
T 3qqz_A 29 ISSLTWSAQSN--TLFSTIN----------KPAAIVEMTTNGDLIRTI---PLD--F-VKDLETIEYIGDNQFVIS--DE 88 (255)
T ss_dssp EEEEEEETTTT--EEEEEEE----------TTEEEEEEETTCCEEEEE---ECS--S-CSSEEEEEECSTTEEEEE--ET
T ss_pred cceeEEeCCCC--EEEEEEC----------CCCeEEEEeCCCCEEEEE---ecC--C-CCChHHeEEeCCCEEEEE--EC
Confidence 58899998765 4454444 123566777776677777 221 1 01223433 344468887 33
Q ss_pred CceEEEEEeCCCce--e--eEeCCCCCC-CCCCccccccccceeeE--ecCeEEEEEeCCCCCEEEEEEeeC--Ceee-E
Q 039662 227 YSKAILSFSMSDEV--F--EEMEGPSVP-QSTTYYQSVKTPWMLGT--YDDCLSLLYSDSFAHTFELWTMTG--GNWT-K 296 (366)
Q Consensus 227 ~~~~Il~fD~~~~~--~--~~i~~P~~~-~~~~~~~~l~~~~~~~~--~~G~L~~~~~~~~~~~~~IW~l~~--~~W~-~ 296 (366)
+...+..|++.+.. + ..+.+|... ....++-.| .. .+++|+++... ....||..+| .... .
T Consensus 89 ~~~~l~~~~v~~~~~i~~~~~~~~~~~~~~~N~g~EGL------A~d~~~~~L~va~E~---~p~~i~~~~g~~~~~~l~ 159 (255)
T 3qqz_A 89 RDYAIYVISLTPNSEVKILKKIKIPLQESPTNCGFEGL------AYSRQDHTFWFFKEK---NPIEVYKVNGLLSSNELH 159 (255)
T ss_dssp TTTEEEEEEECTTCCEEEEEEEECCCSSCCCSSCCEEE------EEETTTTEEEEEEES---SSEEEEEEESTTCSSCCE
T ss_pred CCCcEEEEEcCCCCeeeeeeeeccccccccccCCcceE------EEeCCCCEEEEEECc---CCceEEEEcccccCCcee
Confidence 44567888776543 2 334444311 111111122 22 24578887652 2456777763 1111 1
Q ss_pred EEEecCC---Ccc--eeeEEEe-eCCeEEEEEc-CCeEEEEECCCCeEEEEEEe
Q 039662 297 HSTFGPF---IET--YQPIGFW-RKGEFFLESS-DKRVVLYDSTYQEMRDIRIT 343 (366)
Q Consensus 297 ~~~i~~~---~~~--~~~~~~~-~~g~i~~~~~-~~~~~~yd~~~~~~~~i~~~ 343 (366)
....... ... .+-+.+. ..|.++++.. +..++.+|++.+....+.+.
T Consensus 160 i~~~~~~~~~~~~~d~S~l~~dp~tg~lliLS~~s~~L~~~d~~g~~~~~~~L~ 213 (255)
T 3qqz_A 160 ISKDKALQRQFTLDDVSGAEFNQQKNTLLVLSHESRALQEVTLVGEVIGEMSLT 213 (255)
T ss_dssp EEECHHHHHTCCSSCCCEEEEETTTTEEEEEETTTTEEEEECTTCCEEEEEECS
T ss_pred eecchhhccccccCCceeEEEcCCCCeEEEEECCCCeEEEEcCCCCEEEEEEcC
Confidence 1111000 011 1233344 3477777665 78899999998877776654
No 150
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=26.09 E-value=2.5e+02 Score=22.47 Aligned_cols=182 Identities=12% Similarity=0.042 Sum_probs=89.9
Q ss_pred CeEEEEeCCCcceeecCCCCCCCCCcccccceeeEEeecCCCCCeEEEEEEeeecccCCCCCCcceEEEEEcCC-Cceee
Q 039662 116 TLINLWNVSLNEYRVIPECRPRLPLYTKTHYANVALGLDPVTKDFKLVLILTLWNDHRDSFHDFSHVAVYKFST-NSWRD 194 (366)
Q Consensus 116 ~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~~vyss~~-~~W~~ 194 (366)
..++++|+.+++...+..... ...++.+.|..+ +-++ .. + -.+.+++..+ +..+.
T Consensus 22 ~~i~~~d~~~~~~~~~~~~~~----------~v~~~~~spdg~-~l~~--~~------~-----~~i~~~d~~~~~~~~~ 77 (297)
T 2ojh_A 22 SSIEIFNIRTRKMRVVWQTPE----------LFEAPNWSPDGK-YLLL--NS------E-----GLLYRLSLAGDPSPEK 77 (297)
T ss_dssp EEEEEEETTTTEEEEEEEESS----------CCEEEEECTTSS-EEEE--EE------T-----TEEEEEESSSCCSCEE
T ss_pred eeEEEEeCCCCceeeeccCCc----------ceEeeEECCCCC-EEEE--Ec------C-----CeEEEEeCCCCCCceE
Confidence 359999999998876654321 124566666543 2222 22 1 1678888888 76665
Q ss_pred cCCCccccceeecccceEEECceEEEEEe-cCCCceEEEEEeCCCceeeEeCCCCCCCCCCccccccccceeeEecCe-E
Q 039662 195 LEGFEMRYDYMVDRIFNVYLNGFCYWVVC-RPDYSKAILSFSMSDEVFEEMEGPSVPQSTTYYQSVKTPWMLGTYDDC-L 272 (366)
Q Consensus 195 ~~~~~~~~~~~~~~~~~v~~~G~lywl~~-~~~~~~~Il~fD~~~~~~~~i~~P~~~~~~~~~~~l~~~~~~~~~~G~-L 272 (366)
+..... ... .......-+|.....+. ..++...|..+|+.+.+...+..... ...+ ...-+|+ |
T Consensus 78 ~~~~~~-~~~--~~~~~~spdg~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~------~~~~-----~~spdg~~l 143 (297)
T 2ojh_A 78 VDTGFA-TIC--NNDHGISPDGALYAISDKVEFGKSAIYLLPSTGGTPRLMTKNLP------SYWH-----GWSPDGKSF 143 (297)
T ss_dssp CCCTTC-CCB--CSCCEECTTSSEEEEEECTTTSSCEEEEEETTCCCCEECCSSSS------EEEE-----EECTTSSEE
T ss_pred eccccc-ccc--ccceEECCCCCEEEEEEeCCCCcceEEEEECCCCceEEeecCCC------ccce-----EECCCCCEE
Confidence 521110 000 00111222555333332 12235678888888776554432221 1111 0222565 4
Q ss_pred EEEEeCCCCCEEEEEEee--CCeeeEEEEecCCCcceeeEEEeeCCeE-EEEEc---CCeEEEEECCCCeEEEE
Q 039662 273 SLLYSDSFAHTFELWTMT--GGNWTKHSTFGPFIETYQPIGFWRKGEF-FLESS---DKRVVLYDSTYQEMRDI 340 (366)
Q Consensus 273 ~~~~~~~~~~~~~IW~l~--~~~W~~~~~i~~~~~~~~~~~~~~~g~i-~~~~~---~~~~~~yd~~~~~~~~i 340 (366)
.+... ....+.||.++ +... ..+.........+.+..+|.. ++... ...++.+++.++..+.+
T Consensus 144 ~~~~~--~~~~~~l~~~~~~~~~~---~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~i~~~~~~~~~~~~~ 212 (297)
T 2ojh_A 144 TYCGI--RDQVFDIYSMDIDSGVE---TRLTHGEGRNDGPDYSPDGRWIYFNSSRTGQMQIWRVRVDGSSVERI 212 (297)
T ss_dssp EEEEE--ETTEEEEEEEETTTCCE---EECCCSSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTSSCEEEC
T ss_pred EEEEC--CCCceEEEEEECCCCcc---eEcccCCCccccceECCCCCEEEEEecCCCCccEEEECCCCCCcEEE
Confidence 43443 34578999987 2322 122221222233444566664 44432 34566777677666554
No 151
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=25.89 E-value=3.1e+02 Score=23.43 Aligned_cols=56 Identities=14% Similarity=0.131 Sum_probs=31.8
Q ss_pred CCEEEEEEeeCCeeeEEEEecCCCcceeeEEEeeCCeEEEE-EcCCeEEEEECCCCeEE
Q 039662 281 AHTFELWTMTGGNWTKHSTFGPFIETYQPIGFWRKGEFFLE-SSDKRVVLYDSTYQEMR 338 (366)
Q Consensus 281 ~~~~~IW~l~~~~W~~~~~i~~~~~~~~~~~~~~~g~i~~~-~~~~~~~~yd~~~~~~~ 338 (366)
...+.||-+... .....+........-+.+..++.+++. ..++.+..||+++++..
T Consensus 313 ~~~i~v~d~~~~--~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iw~~~~~~~~ 369 (408)
T 4a11_B 313 GSTIAVYTVYSG--EQITMLKGHYKTVDCCVFQSNFQELYSGSRDCNILAWVPSLYEPV 369 (408)
T ss_dssp TTEEEEEETTTC--CEEEEECCCSSCEEEEEEETTTTEEEEEETTSCEEEEEECC----
T ss_pred CCEEEEEECcCC--cceeeeccCCCeEEEEEEcCCCCEEEEECCCCeEEEEeCCCCCcc
Confidence 368888877621 233444422222334556677776554 45889999999987543
No 152
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=25.10 E-value=2.8e+02 Score=22.69 Aligned_cols=68 Identities=7% Similarity=0.123 Sum_probs=39.0
Q ss_pred eeecceEEEeecCCeEEEEeCCCcceeecCCCCCCCCCcccccceeeEEeecCCCCCeEEEEEEeeecccCCCCCCcceE
Q 039662 103 GPYDGIFCLLKSHTLINLWNVSLNEYRVIPECRPRLPLYTKTHYANVALGLDPVTKDFKLVLILTLWNDHRDSFHDFSHV 182 (366)
Q Consensus 103 ~s~~GLl~~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~ 182 (366)
=|.+|+|.... ++.+.|||..|++...+-.... ......++.+.+..+ + ++... .+. .+
T Consensus 33 WS~~~~lAvg~-D~tV~iWd~~tg~~~~~~~~~~-------~~~~V~~v~~~~~~~-~--l~sgs-----~Dg-----~v 91 (318)
T 4ggc_A 33 WSSGNVLAVAL-DNSVYLWSASSGDILQLLQMEQ-------PGEYISSVAWIKEGN-Y--LAVGT-----SSA-----EV 91 (318)
T ss_dssp ECTTSEEEEEE-TTEEEEEETTTCCEEEEEECCS-------TTCCEEEEEECTTSS-E--EEEEE-----TTS-----EE
T ss_pred ECCCCEEEEEe-CCEEEEEECCCCCEEEEEEecC-------CCCeEEEEEECCCCC-E--EEEEE-----CCC-----cE
Confidence 35677766554 4459999999998776432221 111235677766533 2 22222 022 67
Q ss_pred EEEEcCCCc
Q 039662 183 AVYKFSTNS 191 (366)
Q Consensus 183 ~vyss~~~~ 191 (366)
.+++.+++.
T Consensus 92 ~iw~~~~~~ 100 (318)
T 4ggc_A 92 QLWDVQQQK 100 (318)
T ss_dssp EEEETTTTE
T ss_pred EEeecCCce
Confidence 888887764
No 153
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=24.75 E-value=3.2e+02 Score=23.08 Aligned_cols=59 Identities=8% Similarity=0.066 Sum_probs=33.1
Q ss_pred CCCEEEEEEeeCCeeeEEEEecCCCcceeeEEEeeCCeEEEE-EcCCeEEEEECCCCeEE
Q 039662 280 FAHTFELWTMTGGNWTKHSTFGPFIETYQPIGFWRKGEFFLE-SSDKRVVLYDSTYQEMR 338 (366)
Q Consensus 280 ~~~~~~IW~l~~~~W~~~~~i~~~~~~~~~~~~~~~g~i~~~-~~~~~~~~yd~~~~~~~ 338 (366)
....+.||-+.+........+.-......-+.+..++.++.. ..++.+..||+++++..
T Consensus 56 ~D~~v~vW~~~~~~~~~~~~l~gh~~~v~~~~~~~~~~~l~s~s~D~~i~lWd~~~~~~~ 115 (321)
T 3ow8_A 56 LDDLVKVWKWRDERLDLQWSLEGHQLGVVSVDISHTLPIAASSSLDAHIRLWDLENGKQI 115 (321)
T ss_dssp TTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEE
T ss_pred CCCCEEEEECCCCCeeeeeeeccCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCCCEE
Confidence 457888998874333333333321121223334455555544 34788999999887543
No 154
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=24.37 E-value=3.2e+02 Score=23.05 Aligned_cols=61 Identities=10% Similarity=0.187 Sum_probs=36.4
Q ss_pred CCCEEEEEEee--CCeeeEEEEecCCCcceeeEEEeeCCeEEEEE-cCCeEEEEECCCCeEEEE
Q 039662 280 FAHTFELWTMT--GGNWTKHSTFGPFIETYQPIGFWRKGEFFLES-SDKRVVLYDSTYQEMRDI 340 (366)
Q Consensus 280 ~~~~~~IW~l~--~~~W~~~~~i~~~~~~~~~~~~~~~g~i~~~~-~~~~~~~yd~~~~~~~~i 340 (366)
....+.||-+. +..+.....+........-+.+..++.+++.. .++.+..||..++..+.+
T Consensus 127 ~D~~v~iwd~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~i~iW~~~~~~~~~~ 190 (330)
T 2hes_X 127 RDKSVWIWETDESGEEYECISVLQEHSQDVKHVIWHPSEALLASSSYDDTVRIWKDYDDDWECV 190 (330)
T ss_dssp TTSCEEEEECCTTCCCCEEEEEECCCSSCEEEEEECSSSSEEEEEETTSCEEEEEEETTEEEEE
T ss_pred CCCEEEEEeccCCCCCeEEEEEeccCCCceEEEEECCCCCEEEEEcCCCeEEEEECCCCCeeEE
Confidence 35678888885 35566655554322222334455666665544 477888898877654443
No 155
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=24.36 E-value=4.9e+02 Score=25.15 Aligned_cols=192 Identities=14% Similarity=0.179 Sum_probs=93.3
Q ss_pred eecceEEEeecCCeEEEEeCCCcceeecCCCCCCCCCcccccceeeEEeecCCCCCeEEEEEEeeecccCCCCCCcceEE
Q 039662 104 PYDGIFCLLKSHTLINLWNVSLNEYRVIPECRPRLPLYTKTHYANVALGLDPVTKDFKLVLILTLWNDHRDSFHDFSHVA 183 (366)
Q Consensus 104 s~~GLl~~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~~ 183 (366)
+.+.+|.....++.+.|||..|++....-.... .....+.+.|... + ++ ... .+ -.+.
T Consensus 65 ~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~---------~~v~~~~~s~~~~-~-l~-~~~-----~d-----g~i~ 122 (814)
T 3mkq_A 65 ARKNWIIVGSDDFRIRVFNYNTGEKVVDFEAHP---------DYIRSIAVHPTKP-Y-VL-SGS-----DD-----LTVK 122 (814)
T ss_dssp GGGTEEEEEETTSEEEEEETTTCCEEEEEECCS---------SCEEEEEECSSSS-E-EE-EEE-----TT-----SEEE
T ss_pred CCCCEEEEEeCCCeEEEEECCCCcEEEEEecCC---------CCEEEEEEeCCCC-E-EE-EEc-----CC-----CEEE
Confidence 333445555556679999999887654322111 1235566666433 2 33 222 02 2678
Q ss_pred EEEcCCCceeecCCCccccceeecccceEEE---CceEEEEEecCCCceEEEEEeCCCceeeE-eCCCCCCCCCCccccc
Q 039662 184 VYKFSTNSWRDLEGFEMRYDYMVDRIFNVYL---NGFCYWVVCRPDYSKAILSFSMSDEVFEE-MEGPSVPQSTTYYQSV 259 (366)
Q Consensus 184 vyss~~~~W~~~~~~~~~~~~~~~~~~~v~~---~G~lywl~~~~~~~~~Il~fD~~~~~~~~-i~~P~~~~~~~~~~~l 259 (366)
+|+..++ |.......... ....++.+ +|.....+. . ...|..+|+.+.+... +..+... . ...+
T Consensus 123 vw~~~~~-~~~~~~~~~~~----~~v~~~~~~p~~~~~l~~~~-~--dg~v~vwd~~~~~~~~~~~~~~~~--~--v~~~ 190 (814)
T 3mkq_A 123 LWNWENN-WALEQTFEGHE----HFVMCVAFNPKDPSTFASGC-L--DRTVKVWSLGQSTPNFTLTTGQER--G--VNYV 190 (814)
T ss_dssp EEEGGGT-SEEEEEEECCS----SCEEEEEEETTEEEEEEEEE-T--TSEEEEEETTCSSCSEEEECCCTT--C--CCEE
T ss_pred EEECCCC-ceEEEEEcCCC----CcEEEEEEEcCCCCEEEEEe-C--CCeEEEEECCCCcceeEEecCCCC--C--EEEE
Confidence 8887765 22211001000 01122222 344333332 2 2468888987654322 2222111 0 0111
Q ss_pred cccceeeEe---cCeEEEEEeCCCCCEEEEEEeeCCeeeEEEEecCCCcceeeEEEeeCCeEEEE-EcCCeEEEEECCCC
Q 039662 260 KTPWMLGTY---DDCLSLLYSDSFAHTFELWTMTGGNWTKHSTFGPFIETYQPIGFWRKGEFFLE-SSDKRVVLYDSTYQ 335 (366)
Q Consensus 260 ~~~~~~~~~---~G~L~~~~~~~~~~~~~IW~l~~~~W~~~~~i~~~~~~~~~~~~~~~g~i~~~-~~~~~~~~yd~~~~ 335 (366)
... +|.+.++.. ....+.+|-+.... ....+.........+.+..+|.+++. ..++.+..||+.++
T Consensus 191 ------~~~~~~~~~~l~~~~--~dg~i~~~d~~~~~--~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~v~vwd~~~~ 260 (814)
T 3mkq_A 191 ------DYYPLPDKPYMITAS--DDLTIKIWDYQTKS--CVATLEGHMSNVSFAVFHPTLPIIISGSEDGTLKIWNSSTY 260 (814)
T ss_dssp ------EECCSTTCCEEEEEC--TTSEEEEEETTTTE--EEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTC
T ss_pred ------EEEECCCCCEEEEEe--CCCEEEEEECCCCc--EEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCeEEEEECCCC
Confidence 111 565555544 45689999776321 23333322222334455667765554 44788999999986
Q ss_pred eEEE
Q 039662 336 EMRD 339 (366)
Q Consensus 336 ~~~~ 339 (366)
+...
T Consensus 261 ~~~~ 264 (814)
T 3mkq_A 261 KVEK 264 (814)
T ss_dssp SEEE
T ss_pred cEEE
Confidence 6543
No 156
>2xzh_A Clathrin heavy chain 1; endocytosis, endocytosis inhibition; HET: VH2; 1.69A {Homo sapiens} PDB: 2xzg_A* 3gc3_B 1utc_A 3gd1_I 1c9i_A 1c9l_A
Probab=24.34 E-value=1.8e+02 Score=25.88 Aligned_cols=39 Identities=23% Similarity=0.240 Sum_probs=27.1
Q ss_pred eeEEE--eeC-CeEEEEEcCCeEEEEECCCCeEEEEE-EeCcE
Q 039662 308 QPIGF--WRK-GEFFLESSDKRVVLYDSTYQEMRDIR-ITGLW 346 (366)
Q Consensus 308 ~~~~~--~~~-g~i~~~~~~~~~~~yd~~~~~~~~i~-~~~~~ 346 (366)
-|+++ .+. |-|+++...+-++.||++|++.-... +++..
T Consensus 261 FPVamqvs~kygviyviTK~G~ihlyDleTgt~i~~nrIS~d~ 303 (365)
T 2xzh_A 261 FPVAMQISEKHDVVFLITKYGYIHLYDLETGTCIYMNRISGET 303 (365)
T ss_dssp CEEEEEEETTTTEEEEEETTSEEEEEETTTCCEEEEEECCSSC
T ss_pred ceEEEEecccCCEEEEEeCCcEEEEEEcccCcEEEEeccCCCc
Confidence 34444 333 66788888899999999999876543 44443
No 157
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=23.42 E-value=3.3e+02 Score=22.79 Aligned_cols=184 Identities=10% Similarity=-0.052 Sum_probs=85.8
Q ss_pred CeEEEEeCCCcceee-cCCCCCCCCCcccccceeeEEeecCCCCCeEEEEEEeeecccCCCCCCcceEEEEEcCCCce-e
Q 039662 116 TLINLWNVSLNEYRV-IPECRPRLPLYTKTHYANVALGLDPVTKDFKLVLILTLWNDHRDSFHDFSHVAVYKFSTNSW-R 193 (366)
Q Consensus 116 ~~~~V~NP~T~~~~~-LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~~vyss~~~~W-~ 193 (366)
..+.++|+.|++... ++.... ..++.+++..+ + ++.... ..-.+.+|+..++.- +
T Consensus 69 ~~v~~~d~~~~~~~~~~~~~~~-----------~~~~~~s~dg~-~-l~v~~~----------~~~~v~~~d~~~~~~~~ 125 (353)
T 3vgz_A 69 GVVYRLDPVTLEVTQAIHNDLK-----------PFGATINNTTQ-T-LWFGNT----------VNSAVTAIDAKTGEVKG 125 (353)
T ss_dssp EEEEEECTTTCCEEEEEEESSC-----------CCSEEEETTTT-E-EEEEET----------TTTEEEEEETTTCCEEE
T ss_pred ccEEEEcCCCCeEEEEEecCCC-----------cceEEECCCCC-E-EEEEec----------CCCEEEEEeCCCCeeEE
Confidence 359999999987654 332111 13455555433 2 222221 112678888877653 2
Q ss_pred ecCCCccccc--ee-ecccceEEE--Cce-EEEEEecCCCceEEEEEeCCCceee-EeCCCCCCCCCCccccccccceee
Q 039662 194 DLEGFEMRYD--YM-VDRIFNVYL--NGF-CYWVVCRPDYSKAILSFSMSDEVFE-EMEGPSVPQSTTYYQSVKTPWMLG 266 (366)
Q Consensus 194 ~~~~~~~~~~--~~-~~~~~~v~~--~G~-lywl~~~~~~~~~Il~fD~~~~~~~-~i~~P~~~~~~~~~~~l~~~~~~~ 266 (366)
.+. ...... .. .....++.+ +|. +|.... .....|..+|+++.+.. .++.+.... ..+ ..
T Consensus 126 ~~~-~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~--~~~~~i~~~d~~~~~~~~~~~~~~~~~-----~~~-----~~ 192 (353)
T 3vgz_A 126 RLV-LDDRKRTEEVRPLQPRELVADDATNTVYISGI--GKESVIWVVDGGNIKLKTAIQNTGKMS-----TGL-----AL 192 (353)
T ss_dssp EEE-SCCCCCCSSCCCCEEEEEEEETTTTEEEEEEE--SSSCEEEEEETTTTEEEEEECCCCTTC-----CCC-----EE
T ss_pred EEe-cCCCccccccCCCCCceEEECCCCCEEEEEec--CCCceEEEEcCCCCceEEEecCCCCcc-----ceE-----EE
Confidence 221 110000 00 000122333 555 454431 22446999999987653 344222110 111 02
Q ss_pred EecCeEEEEEeCCCCCEEEEEEeeCCeeeEEEEecC--C--CcceeeEEEeeCCe-EEEEEc-CCeEEEEECCCCeEEE
Q 039662 267 TYDDCLSLLYSDSFAHTFELWTMTGGNWTKHSTFGP--F--IETYQPIGFWRKGE-FFLESS-DKRVVLYDSTYQEMRD 339 (366)
Q Consensus 267 ~~~G~L~~~~~~~~~~~~~IW~l~~~~W~~~~~i~~--~--~~~~~~~~~~~~g~-i~~~~~-~~~~~~yd~~~~~~~~ 339 (366)
.-+|+..++.. ....+.+|-++.. .....+.. . .....-+.+..+|+ +++... ++.+..||+++++...
T Consensus 193 s~dg~~l~~~~--~~~~i~~~d~~~~--~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~ 267 (353)
T 3vgz_A 193 DSEGKRLYTTN--ADGELITIDTADN--KILSRKKLLDDGKEHFFINISLDTARQRAFITDSKAAEVLVVDTRNGNILA 267 (353)
T ss_dssp ETTTTEEEEEC--TTSEEEEEETTTT--EEEEEEECCCSSSCCCEEEEEEETTTTEEEEEESSSSEEEEEETTTCCEEE
T ss_pred CCCCCEEEEEc--CCCeEEEEECCCC--eEEEEEEcCCCCCCcccceEEECCCCCEEEEEeCCCCEEEEEECCCCcEEE
Confidence 33555333333 2455655554422 22222222 1 12223355666766 444443 4789999998876643
No 158
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=21.27 E-value=5.2e+02 Score=25.09 Aligned_cols=31 Identities=13% Similarity=0.158 Sum_probs=20.6
Q ss_pred EECceEEEEEecCCCceEEEEEeCCCcee-eEeCC
Q 039662 213 YLNGFCYWVVCRPDYSKAILSFSMSDEVF-EEMEG 246 (366)
Q Consensus 213 ~~~G~lywl~~~~~~~~~Il~fD~~~~~~-~~i~~ 246 (366)
..++.+||... +...|.++|..+++. ..|..
T Consensus 592 vd~~~lywtd~---~~~~V~~~d~~~G~~~~~i~~ 623 (699)
T 1n7d_A 592 VFEDKVFWTDI---INEAIFSANRLTGSDVNLLAE 623 (699)
T ss_dssp EETTEEEEECS---TTTCEEEEETTTEEEEECCCT
T ss_pred EECCEEEEEeC---CCCeEEEEEccCCCceEEeec
Confidence 35678999852 345699999877654 33433
No 159
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=20.21 E-value=5.6e+02 Score=24.30 Aligned_cols=106 Identities=12% Similarity=0.132 Sum_probs=55.7
Q ss_pred ceEEEEEeCCCceeeEeCCCCCCCCCCccccccccceeeEecCe-EEEEEeCCCCCEEEEEEee--CC-eeeEEEEecCC
Q 039662 228 SKAILSFSMSDEVFEEMEGPSVPQSTTYYQSVKTPWMLGTYDDC-LSLLYSDSFAHTFELWTMT--GG-NWTKHSTFGPF 303 (366)
Q Consensus 228 ~~~Il~fD~~~~~~~~i~~P~~~~~~~~~~~l~~~~~~~~~~G~-L~~~~~~~~~~~~~IW~l~--~~-~W~~~~~i~~~ 303 (366)
...|..+|+++++...+....... .....+ ...-+|+ |++...+.......||+.+ +. ....+..-...
T Consensus 234 ~~~l~~~d~~~~~~~~~~~~~~~~--~~~~~~-----~~spdg~~l~~~~~~~~~~~~~v~~~d~~~g~~~~~~~~~~~~ 306 (706)
T 2z3z_A 234 HVTVGIYHLATGKTVYLQTGEPKE--KFLTNL-----SWSPDENILYVAEVNRAQNECKVNAYDAETGRFVRTLFVETDK 306 (706)
T ss_dssp EEEEEEEETTTTEEEECCCCSCTT--CEEEEE-----EECTTSSEEEEEEECTTSCEEEEEEEETTTCCEEEEEEEEECS
T ss_pred eeEEEEEECCCCceEeeccCCCCc--eeEeeE-----EEECCCCEEEEEEeCCCCCeeEEEEEECCCCceeeEEEEccCC
Confidence 456899999988766554322111 111112 0223676 5555554445666777776 33 55544432211
Q ss_pred C--cceeeEEEee--CCeEEEEEc---CCeEEEEECCCCeEEEE
Q 039662 304 I--ETYQPIGFWR--KGEFFLESS---DKRVVLYDSTYQEMRDI 340 (366)
Q Consensus 304 ~--~~~~~~~~~~--~g~i~~~~~---~~~~~~yd~~~~~~~~i 340 (366)
. .....+.+.. +|++++... ...++.+|.+++.++.+
T Consensus 307 ~~~~~~~~~~~sp~~dg~~l~~~~~~g~~~l~~~~~~~~~~~~l 350 (706)
T 2z3z_A 307 HYVEPLHPLTFLPGSNNQFIWQSRRDGWNHLYLYDTTGRLIRQV 350 (706)
T ss_dssp SCCCCCSCCEECTTCSSEEEEEECTTSSCEEEEEETTSCEEEEC
T ss_pred CeECccCCceeecCCCCEEEEEEccCCccEEEEEECCCCEEEec
Confidence 1 1113345566 787665543 24677788777666554
No 160
>1i2h_A PSD-ZIP45(homer-1C/VESL-1L); enabled VAsp homology 1 domain, signaling protein; 1.80A {Rattus norvegicus} SCOP: b.55.1.4
Probab=20.16 E-value=1.9e+02 Score=22.56 Aligned_cols=38 Identities=5% Similarity=0.097 Sum_probs=26.6
Q ss_pred EEEEeCCCc-ceeecCCCCCCCCCcccccceeeEEeecCCCCCeEEEEEE
Q 039662 118 INLWNVSLN-EYRVIPECRPRLPLYTKTHYANVALGLDPVTKDFKLVLIL 166 (366)
Q Consensus 118 ~~V~NP~T~-~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~ 166 (366)
+++.+|.|+ .|...-... ..+.+-+|...+.|+|+.+.
T Consensus 18 Vm~~D~~tk~~WvP~g~~~-----------~~V~i~~d~~rnsyRIvg~~ 56 (168)
T 1i2h_A 18 VFQIDPNTKKNWVPTSKHA-----------VTVSYFYDSTRNVYRIISLD 56 (168)
T ss_dssp EEEECTTSSCCSEESCSSC-----------EEEEEEEETTTTEEEEEEEE
T ss_pred EEEECCCCCCceeecCCCC-----------eEEEEEEcCCCCEEEEEEcc
Confidence 888999997 785322211 23566688888899998864
Done!