BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 039663
(102 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|225016150|gb|ACN78974.1| retrotransposon protein [Glycine max]
gi|225016158|gb|ACN78981.1| retrotransposon protein [Glycine max]
Length = 1261
Score = 74.7 bits (182), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 35/79 (44%), Positives = 49/79 (62%)
Query: 5 VDVGNGERIRSEGHCSKVKFEMQGVEFEVDFHILDFSGANAGLAVQWLEKLGKIVTDHKA 64
V VGNGE ++ C +V +Q F VDFHIL GA+ L VQWL+ LG ++TD+
Sbjct: 458 VTVGNGEELQCNQVCPEVAVHIQAHTFLVDFHILPICGADVVLGVQWLKSLGPVLTDYAT 517
Query: 65 LTMEFTYRRQPIKLVGAQN 83
LTM+F Y + I+L G ++
Sbjct: 518 LTMKFIYNDKLIELKGDRD 536
>gi|147843077|emb|CAN83300.1| hypothetical protein VITISV_044100 [Vitis vinifera]
Length = 1366
Score = 74.3 bits (181), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 35/76 (46%), Positives = 46/76 (60%)
Query: 5 VDVGNGERIRSEGHCSKVKFEMQGVEFEVDFHILDFSGANAGLAVQWLEKLGKIVTDHKA 64
V V NG+ +RSEG C+ V MQG + +DF+IL G + L VQWL+ LG I+ D
Sbjct: 373 VKVANGQAVRSEGSCAAVPLHMQGNLYTIDFYILTLGGCDIVLGVQWLQTLGPILWDFSR 432
Query: 65 LTMEFTYRRQPIKLVG 80
L MEF+ +P KL G
Sbjct: 433 LQMEFSVWDKPRKLQG 448
>gi|147774273|emb|CAN76793.1| hypothetical protein VITISV_026680 [Vitis vinifera]
Length = 1469
Score = 73.9 bits (180), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 35/76 (46%), Positives = 46/76 (60%)
Query: 5 VDVGNGERIRSEGHCSKVKFEMQGVEFEVDFHILDFSGANAGLAVQWLEKLGKIVTDHKA 64
V V NG+ +RSEG C+ V MQG + +DF+IL G + L VQWL+ LG I+ D
Sbjct: 406 VKVANGQAVRSEGSCAAVPLHMQGNLYTIDFYILTLGGCDIVLGVQWLQTLGPILWDFSR 465
Query: 65 LTMEFTYRRQPIKLVG 80
L MEF+ +P KL G
Sbjct: 466 LQMEFSVWDKPRKLQG 481
>gi|147772855|emb|CAN73669.1| hypothetical protein VITISV_003711 [Vitis vinifera]
Length = 1308
Score = 73.6 bits (179), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 40/96 (41%), Positives = 55/96 (57%), Gaps = 3/96 (3%)
Query: 3 FLVDVGNGERIRSEGHCSKVKFEMQGVEFEVDFHILDFSGANAGLAVQWLEKLGKIVTDH 62
F V V NGER+ +G K+ +QG EF +DF + +G + L +QWLE LG +V D
Sbjct: 268 FTVRVANGERLSCKGKYEKLTVNLQGNEFHLDFFSVPLNGLDMVLGIQWLETLGSVVCDW 327
Query: 63 KALTMEFTYRRQPIKLVGAQNILPKPTQSIHLQSRI 98
K TM+F + +QP KL G + +P P Q LQ I
Sbjct: 328 KKRTMDFIWEQQPKKLQGIE--IP-PIQDTTLQGFI 360
>gi|359479937|ref|XP_002269588.2| PREDICTED: uncharacterized protein LOC100257206 [Vitis vinifera]
Length = 787
Score = 70.9 bits (172), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 35/79 (44%), Positives = 48/79 (60%)
Query: 2 SFLVDVGNGERIRSEGHCSKVKFEMQGVEFEVDFHILDFSGANAGLAVQWLEKLGKIVTD 61
+F V V NGER++ +G KV+ E+QG EF + L SG + L VQWLE LG +V +
Sbjct: 373 TFPVWVANGERLKCQGRYDKVRVELQGTEFYLTLFSLPLSGLDLVLGVQWLEMLGSVVCN 432
Query: 62 HKALTMEFTYRRQPIKLVG 80
K LTM+F + Q +L G
Sbjct: 433 WKQLTMDFIWENQDRRLQG 451
>gi|147789424|emb|CAN66607.1| hypothetical protein VITISV_017554 [Vitis vinifera]
Length = 2822
Score = 70.5 bits (171), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 34/76 (44%), Positives = 45/76 (59%)
Query: 5 VDVGNGERIRSEGHCSKVKFEMQGVEFEVDFHILDFSGANAGLAVQWLEKLGKIVTDHKA 64
V V NG+ + SEG C+ V MQG + +DF+IL G + L VQWL+ LG I+ D
Sbjct: 371 VKVANGQAVCSEGSCAAVPLHMQGNLYTIDFYILTLGGCDIVLGVQWLQTLGPILWDFSR 430
Query: 65 LTMEFTYRRQPIKLVG 80
L MEF+ +P KL G
Sbjct: 431 LQMEFSVWDKPQKLQG 446
>gi|89887334|gb|ABD78322.1| polyprotein [Primula vulgaris]
Length = 1359
Score = 70.1 bits (170), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/79 (44%), Positives = 47/79 (59%)
Query: 5 VDVGNGERIRSEGHCSKVKFEMQGVEFEVDFHILDFSGANAGLAVQWLEKLGKIVTDHKA 64
V + NG++I+S G C KVK +Q +FEVDF +L G + L V WL +LG I D K
Sbjct: 335 VKIANGDKIKSSGTCEKVKLLIQENQFEVDFLLLPLVGYDLVLGVHWLSQLGVINCDFKN 394
Query: 65 LTMEFTYRRQPIKLVGAQN 83
LTM FT+ + + L G N
Sbjct: 395 LTMTFTHGNKKVCLKGLNN 413
>gi|147773289|emb|CAN64782.1| hypothetical protein VITISV_003835 [Vitis vinifera]
Length = 1575
Score = 70.1 bits (170), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 33/79 (41%), Positives = 47/79 (59%)
Query: 2 SFLVDVGNGERIRSEGHCSKVKFEMQGVEFEVDFHILDFSGANAGLAVQWLEKLGKIVTD 61
SF+V V NGE +R +G +V+ +QG F + + L +G + L +QWLE LG + D
Sbjct: 674 SFMVRVANGENLRCQGRFEEVQINLQGTIFSLTLYSLPLTGLDIVLGIQWLELLGSVGCD 733
Query: 62 HKALTMEFTYRRQPIKLVG 80
+ LTMEF + Q KLVG
Sbjct: 734 WRELTMEFMWENQTKKLVG 752
>gi|147841216|emb|CAN64356.1| hypothetical protein VITISV_020633 [Vitis vinifera]
Length = 1852
Score = 67.4 bits (163), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 34/95 (35%), Positives = 53/95 (55%), Gaps = 4/95 (4%)
Query: 2 SFLVDVGNGERIRSEGHCSKVKFEMQGVEFEVDFHILDFSGANAGLAVQWLEKLGKIVTD 61
SF V V NGER+ +G KV ++QG+ F + + L +G + L +QWL LG +V +
Sbjct: 309 SFTVHVANGERLLCQGRFEKVPIDLQGIPFSLTCYSLPLAGLDMVLGIQWLXMLGSVVCN 368
Query: 62 HKALTMEFTYRRQPIKLVGAQNILPKPTQSIHLQS 96
+ LTM+F + Q +L G Q P Q+ L++
Sbjct: 369 WQYLTMDFNWENQARRLQGIQG----PIQATSLET 399
>gi|147842329|emb|CAN76208.1| hypothetical protein VITISV_041623 [Vitis vinifera]
Length = 522
Score = 67.4 bits (163), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/84 (39%), Positives = 50/84 (59%), Gaps = 2/84 (2%)
Query: 3 FLVDVGNGERIRSEGHCSKVKFEMQGVEFEVDFHILDFSGANAGLAVQWLEKLGKIVTDH 62
F V V NG+ ++ +G + +QG+ F + F+ L +G + L VQWLE+LG +V D
Sbjct: 362 FHVRVANGQPLKCQGRFDNIHILLQGIPFSITFYSLPLNGLDLVLGVQWLEQLGSVVCDW 421
Query: 63 KALTMEFTYRRQPIKLVG--AQNI 84
K +TMEF + +P L G AQN+
Sbjct: 422 KQMTMEFQWANKPRLLQGSRAQNL 445
>gi|147860462|emb|CAN82562.1| hypothetical protein VITISV_014148 [Vitis vinifera]
Length = 1384
Score = 64.7 bits (156), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 36/94 (38%), Positives = 50/94 (53%), Gaps = 6/94 (6%)
Query: 3 FLVDVGNGERIRSEGHCSKVKFEMQGVEFEVDFHILDFSGANAGLAVQWLEKLGKIVTDH 62
F V V NG ++ +G V +QG+ F + + L +G + L VQWLE+LG IV +
Sbjct: 454 FTVKVANGTPLKCQGRFEHVHVILQGIPFSLTLYSLPLTGLDLVLGVQWLEQLGTIVCNW 513
Query: 63 KALTMEFTYRRQPIKLVGAQNILPKPTQSIHLQS 96
K LTMEF + Q KL G TQ+I + S
Sbjct: 514 KKLTMEFQWZNQTHKLQGTN------TQTIQVAS 541
>gi|147775005|emb|CAN70471.1| hypothetical protein VITISV_013478 [Vitis vinifera]
Length = 1122
Score = 64.3 bits (155), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 50/94 (53%), Gaps = 6/94 (6%)
Query: 3 FLVDVGNGERIRSEGHCSKVKFEMQGVEFEVDFHILDFSGANAGLAVQWLEKLGKIVTDH 62
F V V NG ++ +G V +QG+ F + + L +G + L VQWLE+LG +V +
Sbjct: 43 FTVKVANGTPLKCQGRFEHVHVILQGIPFSLTLYSLPLTGLDLVLGVQWLEQLGTVVCNW 102
Query: 63 KALTMEFTYRRQPIKLVGAQNILPKPTQSIHLQS 96
K LTMEF + Q KL G TQ+I + S
Sbjct: 103 KKLTMEFQWENQTHKLQGTN------TQTIQVAS 130
>gi|356529593|ref|XP_003533374.1| PREDICTED: uncharacterized protein LOC100812827 [Glycine max]
Length = 572
Score = 63.9 bits (154), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 45/76 (59%)
Query: 5 VDVGNGERIRSEGHCSKVKFEMQGVEFEVDFHILDFSGANAGLAVQWLEKLGKIVTDHKA 64
+ +G+G R+ + G C V +M G+E VD +L+ G + L V WL LG ++ D KA
Sbjct: 445 IKLGDGHRLITNGVCKGVNMQMGGIEVIVDALVLELGGMDMVLGVAWLRTLGNVIMDWKA 504
Query: 65 LTMEFTYRRQPIKLVG 80
+TM+F+Y + + L G
Sbjct: 505 MTMQFSYEHELVTLQG 520
>gi|356569674|ref|XP_003553022.1| PREDICTED: uncharacterized protein LOC100788433 [Glycine max]
Length = 1433
Score = 63.5 bits (153), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 51/97 (52%)
Query: 5 VDVGNGERIRSEGHCSKVKFEMQGVEFEVDFHILDFSGANAGLAVQWLEKLGKIVTDHKA 64
V VGNG + C +Q F + FH+L SGA+ L +QWL+ LG I TD+ +
Sbjct: 394 VLVGNGAVLTCTHLCPDTTISLQSHHFTLTFHLLPISGADVILGIQWLKLLGPITTDYTS 453
Query: 65 LTMEFTYRRQPIKLVGAQNILPKPTQSIHLQSRIFTS 101
L M+F + QP++L + P P + ++ I T+
Sbjct: 454 LIMKFHHLGQPVELHVDADHGPHPISATQIKRMIQTN 490
>gi|356511037|ref|XP_003524238.1| PREDICTED: uncharacterized protein LOC100782971 [Glycine max]
Length = 1863
Score = 63.2 bits (152), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 42/77 (54%)
Query: 2 SFLVDVGNGERIRSEGHCSKVKFEMQGVEFEVDFHILDFSGANAGLAVQWLEKLGKIVTD 61
S V VGNG + + C +Q F V +L SGA+ L V+WL LG I+TD
Sbjct: 347 SLQVMVGNGSVLECKQSCPATTLLLQQHSFTVTLRVLPISGADVVLGVEWLRTLGPIITD 406
Query: 62 HKALTMEFTYRRQPIKL 78
+ + TM+FT+ QPI L
Sbjct: 407 YTSFTMQFTHLGQPIIL 423
>gi|170660047|gb|ACB28472.1| polyprotein [Ananas comosus]
Length = 953
Score = 63.2 bits (152), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 46/77 (59%)
Query: 5 VDVGNGERIRSEGHCSKVKFEMQGVEFEVDFHILDFSGANAGLAVQWLEKLGKIVTDHKA 64
V V +G ++ S C K++MQG+EF+ + +L G + L VQWL++LG I+ D
Sbjct: 56 VTVADGNKLISSSTCRAFKWKMQGLEFKANLLLLPLRGCDMVLGVQWLKQLGPILWDFSK 115
Query: 65 LTMEFTYRRQPIKLVGA 81
L MEF ++ Q I L G+
Sbjct: 116 LRMEFQFQGQKIVLRGS 132
>gi|147784790|emb|CAN75225.1| hypothetical protein VITISV_035856 [Vitis vinifera]
Length = 793
Score = 62.0 bits (149), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 50/94 (53%), Gaps = 6/94 (6%)
Query: 3 FLVDVGNGERIRSEGHCSKVKFEMQGVEFEVDFHILDFSGANAGLAVQWLEKLGKIVTDH 62
F V V NG ++ +G V +QG+ F + + L +G + L VQWLE+LG +V +
Sbjct: 346 FTVKVVNGTPLKCQGRFEHVHVILQGIPFSLTLYSLPLTGLDLVLGVQWLEQLGTVVCNW 405
Query: 63 KALTMEFTYRRQPIKLVGAQNILPKPTQSIHLQS 96
K LTMEF + Q KL G TQ+I + S
Sbjct: 406 KKLTMEFQWENQTHKLQGTN------TQTIQVAS 433
>gi|356514101|ref|XP_003525745.1| PREDICTED: uncharacterized protein LOC100809540 [Glycine max]
Length = 1232
Score = 61.6 bits (148), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 39/98 (39%), Positives = 51/98 (52%), Gaps = 6/98 (6%)
Query: 5 VDVGNGERIRSEGHCSKVKFEMQGVEFEVDFHILDFSGANAGLAVQWLEKLGKIVTDHKA 64
V VG+G I + +V +QG +F D L SGA+ L VQWL LG + TD+ A
Sbjct: 272 VMVGDGGVIHCDCRYPQVSITIQGHQFTTDLFGLPLSGADLVLGVQWLRALGPVTTDYTA 331
Query: 65 LTMEFTYRRQPIKLVGAQNILPKPTQSIHLQSRIFTSP 102
L+M FT+ PIKL ++L P S S I SP
Sbjct: 332 LSMSFTHLGLPIKLFA--DVLLGPASS----SPITNSP 363
>gi|147770944|emb|CAN69535.1| hypothetical protein VITISV_013569 [Vitis vinifera]
Length = 617
Score = 61.6 bits (148), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 45/81 (55%)
Query: 3 FLVDVGNGERIRSEGHCSKVKFEMQGVEFEVDFHILDFSGANAGLAVQWLEKLGKIVTDH 62
F V V N + ++ +G + +QG+ F + F+ L + + L VQWLE+LG +V D
Sbjct: 262 FHVRVANDQPLKCQGRFHNIHILLQGIPFSITFYSLPLTSLDLVLGVQWLEQLGSVVCDW 321
Query: 63 KALTMEFTYRRQPIKLVGAQN 83
K +TMEF + +P L G+
Sbjct: 322 KRMTMEFQWANKPRLLQGSNT 342
>gi|147860532|emb|CAN81876.1| hypothetical protein VITISV_034528 [Vitis vinifera]
Length = 1241
Score = 60.5 bits (145), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/94 (36%), Positives = 49/94 (52%), Gaps = 6/94 (6%)
Query: 3 FLVDVGNGERIRSEGHCSKVKFEMQGVEFEVDFHILDFSGANAGLAVQWLEKLGKIVTDH 62
F V V NG ++ +G V +QG+ F + + L +G + L VQWLE+L +V +
Sbjct: 378 FTVKVANGTPLKCQGRFEHVHVILQGIPFSLTLYSLPLTGLDLVLGVQWLEQLETVVCNW 437
Query: 63 KALTMEFTYRRQPIKLVGAQNILPKPTQSIHLQS 96
K LTMEF + Q KL G TQ+I + S
Sbjct: 438 KKLTMEFQWENQTHKLQGTN------TQTIQVAS 465
>gi|356551468|ref|XP_003544097.1| PREDICTED: uncharacterized protein LOC100808479 [Glycine max]
Length = 600
Score = 59.7 bits (143), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 46/77 (59%)
Query: 7 VGNGERIRSEGHCSKVKFEMQGVEFEVDFHILDFSGANAGLAVQWLEKLGKIVTDHKALT 66
V NG + C+ V +QG F VDFH++ +GA+ L VQWL+ LG I+ ++ LT
Sbjct: 2 VRNGNELDCLHLCNNVSIHVQGHVFIVDFHVMSLTGADLVLGVQWLKSLGLILKNYSDLT 61
Query: 67 MEFTYRRQPIKLVGAQN 83
M+F + + I+L G ++
Sbjct: 62 MQFFHTGRVIQLQGNRD 78
>gi|147783182|emb|CAN68669.1| hypothetical protein VITISV_039388 [Vitis vinifera]
Length = 1360
Score = 59.3 bits (142), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 28/67 (41%), Positives = 35/67 (52%)
Query: 3 FLVDVGNGERIRSEGHCSKVKFEMQGVEFEVDFHILDFSGANAGLAVQWLEKLGKIVTDH 62
F V V N E+I G C + +QG D++IL + L VQWLE LG I D+
Sbjct: 407 FEVMVANREKIECAGQCRSLTLTIQGYSVTADYYILPVAACQLVLGVQWLETLGPIEMDY 466
Query: 63 KALTMEF 69
K LTM F
Sbjct: 467 KQLTMNF 473
>gi|147838975|emb|CAN68101.1| hypothetical protein VITISV_042364 [Vitis vinifera]
Length = 566
Score = 57.8 bits (138), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 33/94 (35%), Positives = 48/94 (51%), Gaps = 6/94 (6%)
Query: 3 FLVDVGNGERIRSEGHCSKVKFEMQGVEFEVDFHILDFSGANAGLAVQWLEKLGKIVTDH 62
F V V NG ++ + V +QG+ F + + L + + L VQWLE+LG +V +
Sbjct: 364 FTVKVANGTPLKCQWRFEHVHVILQGIPFSLTLYSLPLTXLDLVLGVQWLEQLGTVVCNW 423
Query: 63 KALTMEFTYRRQPIKLVGAQNILPKPTQSIHLQS 96
K LTMEF + Q KL G TQ+I + S
Sbjct: 424 KKLTMEFQWENQTHKLQGTN------TQTIQVAS 451
>gi|147806355|emb|CAN67624.1| hypothetical protein VITISV_037284 [Vitis vinifera]
Length = 921
Score = 57.0 bits (136), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/67 (41%), Positives = 35/67 (52%)
Query: 3 FLVDVGNGERIRSEGHCSKVKFEMQGVEFEVDFHILDFSGANAGLAVQWLEKLGKIVTDH 62
F V V N E+I G C V +QG D+++L S L VQWLE LG I D+
Sbjct: 235 FQVMVANXEKIXCVGLCPTVTISIQGKSITADYYVLPVSXCQLVLGVQWLETLGPIEMDY 294
Query: 63 KALTMEF 69
K LTM +
Sbjct: 295 KKLTMTY 301
>gi|32483242|emb|CAE02543.1| OSJNBb0069N01.1 [Oryza sativa Japonica Group]
gi|38344504|emb|CAE05183.2| OSJNBa0013A04.20 [Oryza sativa Japonica Group]
Length = 1395
Score = 55.5 bits (132), Expect = 4e-06, Method: Composition-based stats.
Identities = 28/76 (36%), Positives = 40/76 (52%)
Query: 5 VDVGNGERIRSEGHCSKVKFEMQGVEFEVDFHILDFSGANAGLAVQWLEKLGKIVTDHKA 64
V V NG+++ G + F++ G EF D ++L G + L QWL LG I+ D A
Sbjct: 439 VTVANGDKVACPGVFPDMPFQIAGEEFATDVYVLTLGGYDLVLGTQWLATLGPILWDFTA 498
Query: 65 LTMEFTYRRQPIKLVG 80
LTM F +R + L G
Sbjct: 499 LTMSFWHRDHCVTLHG 514
>gi|12322008|gb|AAG51046.1|AC069473_8 gypsy/Ty-3 retroelement polyprotein; 69905-74404 [Arabidopsis
thaliana]
gi|10998138|dbj|BAB03109.1| retroelement pol polyprotein [Arabidopsis thaliana]
Length = 1499
Score = 55.1 bits (131), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 41/76 (53%)
Query: 5 VDVGNGERIRSEGHCSKVKFEMQGVEFEVDFHILDFSGANAGLAVQWLEKLGKIVTDHKA 64
V V +G ++R EG + +++Q F+ D ++ G + L VQWLE LG+I + K
Sbjct: 434 VSVADGRKLRVEGKVTDFSWKLQTTTFQSDILLIPLQGIDMVLGVQWLETLGRISWEFKK 493
Query: 65 LTMEFTYRRQPIKLVG 80
L M F + Q + L G
Sbjct: 494 LEMRFKFNNQKVLLHG 509
>gi|218197921|gb|EEC80348.1| hypothetical protein OsI_22431 [Oryza sativa Indica Group]
Length = 402
Score = 54.3 bits (129), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 37/65 (56%)
Query: 5 VDVGNGERIRSEGHCSKVKFEMQGVEFEVDFHILDFSGANAGLAVQWLEKLGKIVTDHKA 64
V V NG+++ S G CS + ++ +F +D +++ G + L VQWL LG I+ D
Sbjct: 217 VMVANGDQVTSSGICSGIPIKIDSEDFIIDCYVIPLEGYDVVLGVQWLRTLGPILWDFDK 276
Query: 65 LTMEF 69
LTM F
Sbjct: 277 LTMSF 281
>gi|27764548|gb|AAO23078.1| polyprotein [Glycine max]
Length = 1552
Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 44/79 (55%)
Query: 5 VDVGNGERIRSEGHCSKVKFEMQGVEFEVDFHILDFSGANAGLAVQWLEKLGKIVTDHKA 64
V VGNG+ + +EG ++ +QG E +V ++L SGA+ L WL LG V D+ A
Sbjct: 435 VLVGNGQILSAEGIVQQLPLHIQGQEVKVPVYLLQISGADVILGSTWLATLGPHVADYAA 494
Query: 65 LTMEFTYRRQPIKLVGAQN 83
LT++F + I L G N
Sbjct: 495 LTLKFFQNDKFITLQGEGN 513
>gi|208609057|dbj|BAG72151.1| hypothetical protein [Lotus japonicus]
Length = 1558
Score = 53.5 bits (127), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 44/82 (53%)
Query: 3 FLVDVGNGERIRSEGHCSKVKFEMQGVEFEVDFHILDFSGANAGLAVQWLEKLGKIVTDH 62
++V+VGNG + R+ G C +K E+QG+ F IL G L + WL LG I +
Sbjct: 467 YVVEVGNGAKERNSGVCKNLKLEVQGIPIMQHFFILGLGGTEVVLGMDWLASLGNIEANF 526
Query: 63 KALTMEFTYRRQPIKLVGAQNI 84
+ L +++ + Q + L G ++
Sbjct: 527 QELIIQWVSQGQKMVLQGEPSV 548
>gi|208609051|dbj|BAG72148.1| hypothetical protein [Lotus japonicus]
gi|208609062|dbj|BAG72153.1| hypothetical protein [Lotus japonicus]
Length = 1558
Score = 53.5 bits (127), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 44/82 (53%)
Query: 3 FLVDVGNGERIRSEGHCSKVKFEMQGVEFEVDFHILDFSGANAGLAVQWLEKLGKIVTDH 62
++V+VGNG + R+ G C +K E+QG+ F IL G L + WL LG I +
Sbjct: 467 YVVEVGNGAKERNSGVCKNLKLEVQGIPIMQHFFILGLGGTEVVLGMDWLASLGNIEANF 526
Query: 63 KALTMEFTYRRQPIKLVGAQNI 84
+ L +++ + Q + L G ++
Sbjct: 527 QELIIQWVSQGQKMVLQGEPSV 548
>gi|208609055|dbj|BAG72150.1| hypothetical protein [Lotus japonicus]
Length = 1558
Score = 53.5 bits (127), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 44/82 (53%)
Query: 3 FLVDVGNGERIRSEGHCSKVKFEMQGVEFEVDFHILDFSGANAGLAVQWLEKLGKIVTDH 62
++V+VGNG + R+ G C +K E+QG+ F IL G L + WL LG I +
Sbjct: 467 YVVEVGNGAKERNSGVCKNLKLEVQGIPIMQHFFILGLGGTEVVLGMDWLASLGNIEANF 526
Query: 63 KALTMEFTYRRQPIKLVGAQNI 84
+ L +++ + Q + L G ++
Sbjct: 527 QELIIQWVSQGQKMVLQGEPSV 548
>gi|6466937|gb|AAF13073.1|AC011621_1 putative retroelement pol polyprotein [Arabidopsis thaliana]
Length = 1661
Score = 53.5 bits (127), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 42/83 (50%)
Query: 2 SFLVDVGNGERIRSEGHCSKVKFEMQGVEFEVDFHILDFSGANAGLAVQWLEKLGKIVTD 61
SF V VG G I+S G C + E+QG+EF D+++ D + L WL LG+ +
Sbjct: 554 SFGVKVGGGRIIKSSGKCVDIPLEVQGIEFVQDYYLFDLGDLDLVLGFSWLAGLGETRAN 613
Query: 62 HKALTMEFTYRRQPIKLVGAQNI 84
+ L + + R + L G ++
Sbjct: 614 WRDLRISWQIGRTWVSLYGDPDL 636
>gi|208609049|dbj|BAG72147.1| hypothetical protein [Lotus japonicus]
gi|208609053|dbj|BAG72149.1| hypothetical protein [Lotus japonicus]
Length = 1520
Score = 53.5 bits (127), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 44/82 (53%)
Query: 3 FLVDVGNGERIRSEGHCSKVKFEMQGVEFEVDFHILDFSGANAGLAVQWLEKLGKIVTDH 62
++V+VGNG + R+ G C +K E+QG+ F IL G L + WL LG I +
Sbjct: 429 YVVEVGNGAKERNSGVCKNLKLEVQGIPIMQHFFILGLGGTEVVLGMDWLASLGNIEANF 488
Query: 63 KALTMEFTYRRQPIKLVGAQNI 84
+ L +++ + Q + L G ++
Sbjct: 489 QELIIQWVSQGQKMVLQGEPSV 510
>gi|208609065|dbj|BAG72154.1| hypothetical protein [Lotus japonicus]
Length = 1558
Score = 53.5 bits (127), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 44/82 (53%)
Query: 3 FLVDVGNGERIRSEGHCSKVKFEMQGVEFEVDFHILDFSGANAGLAVQWLEKLGKIVTDH 62
++V+VGNG + R+ G C +K E+QG+ F IL G L + WL LG I +
Sbjct: 467 YVVEVGNGAKERNSGVCKNLKLEVQGIPIMQHFFILGLGGTEVVLGMDWLASLGNIEANF 526
Query: 63 KALTMEFTYRRQPIKLVGAQNI 84
+ L +++ + Q + L G ++
Sbjct: 527 QELIIQWVSQGQKMVLQGEPSV 548
>gi|261865347|gb|ACY01928.1| hypothetical protein [Beta vulgaris]
Length = 1583
Score = 53.5 bits (127), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 40/78 (51%)
Query: 3 FLVDVGNGERIRSEGHCSKVKFEMQGVEFEVDFHILDFSGANAGLAVQWLEKLGKIVTDH 62
F V +G G +G C V +QGV D+ L ++ L VQWLEKLG +VT+
Sbjct: 462 FGVSLGTGAEAHGQGECKAVPLHLQGVCVMEDYLPLTLGNSDLILGVQWLEKLGTMVTNW 521
Query: 63 KALTMEFTYRRQPIKLVG 80
K T+++ + + L G
Sbjct: 522 KTQTLQYKEGNETVTLRG 539
>gi|449465222|ref|XP_004150327.1| PREDICTED: uncharacterized protein LOC101216833 [Cucumis sativus]
Length = 2712
Score = 53.5 bits (127), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 43/76 (56%)
Query: 5 VDVGNGERIRSEGHCSKVKFEMQGVEFEVDFHILDFSGANAGLAVQWLEKLGKIVTDHKA 64
V +G+G ++ +G C ++ E++G + E +F L+ G + L +QWL LG D K
Sbjct: 1374 VILGSGAAVKGKGICEGIELELEGWKVEANFLPLELGGVDGVLEMQWLYSLGVTEVDWKN 1433
Query: 65 LTMEFTYRRQPIKLVG 80
LTM F + + +K+ G
Sbjct: 1434 LTMTFLHNGKKVKIKG 1449
>gi|12322948|gb|AAG51464.1|AC069160_10 gypsy/Ty3 element polyprotein, putative [Arabidopsis thaliana]
Length = 1447
Score = 52.8 bits (125), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 41/76 (53%)
Query: 5 VDVGNGERIRSEGHCSKVKFEMQGVEFEVDFHILDFSGANAGLAVQWLEKLGKIVTDHKA 64
V V +G ++ +G +++Q F+ D ++ G + L VQWLE LG+I + K
Sbjct: 413 VAVADGRKLNVDGQIKGFTWKLQSTTFQSDILLIPLQGVDMVLGVQWLETLGRISWEFKK 472
Query: 65 LTMEFTYRRQPIKLVG 80
L M+F Y+ Q + L G
Sbjct: 473 LEMQFFYKNQRVWLHG 488
>gi|449472371|ref|XP_004153573.1| PREDICTED: uncharacterized protein LOC101213561, partial [Cucumis
sativus]
Length = 764
Score = 52.8 bits (125), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 44/78 (56%)
Query: 3 FLVDVGNGERIRSEGHCSKVKFEMQGVEFEVDFHILDFSGANAGLAVQWLEKLGKIVTDH 62
+ V +G+G ++ +G C ++ E++G + E +F L+ G + L +QWL LG D
Sbjct: 459 YGVILGSGAAVKGKGICEGIELELEGWKVEANFLPLELGGVDGVLGMQWLYSLGVTEVDW 518
Query: 63 KALTMEFTYRRQPIKLVG 80
K LTM F + + +K+ G
Sbjct: 519 KNLTMTFLHNGKKVKIKG 536
>gi|449457325|ref|XP_004146399.1| PREDICTED: uncharacterized protein LOC101219499 [Cucumis sativus]
Length = 718
Score = 52.8 bits (125), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 44/78 (56%)
Query: 3 FLVDVGNGERIRSEGHCSKVKFEMQGVEFEVDFHILDFSGANAGLAVQWLEKLGKIVTDH 62
+ V +G+G ++ +G C ++ E++G + E +F L+ G + L +QWL LG D
Sbjct: 432 YGVILGSGAAVKGKGICEGIELELEGWKVEANFLPLELGGVDGVLGMQWLYSLGVTEVDW 491
Query: 63 KALTMEFTYRRQPIKLVG 80
K LTM F + + +K+ G
Sbjct: 492 KNLTMTFLHNGKKVKIKG 509
>gi|147802690|emb|CAN72998.1| hypothetical protein VITISV_043958 [Vitis vinifera]
Length = 1078
Score = 52.0 bits (123), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 48/89 (53%), Gaps = 1/89 (1%)
Query: 3 FLVDVGNGERIRSEGHCSKVKFEMQGVEFEVD-FHILDFSGANAGLAVQWLEKLGKIVTD 61
F V V NG+ ++ +G V +QG+ F + + L G + L V LE+LG +V D
Sbjct: 307 FNVKVANGDPLKCQGRFENVSVLLQGIPFTLSTLYSLPLIGLDMVLGVHXLEQLGTVVCD 366
Query: 62 HKALTMEFTYRRQPIKLVGAQNILPKPTQ 90
K +TMEF+++ +L G N +PT+
Sbjct: 367 XKIMTMEFSWKDXRHQLEGIDNQPIQPTK 395
>gi|356574444|ref|XP_003555357.1| PREDICTED: uncharacterized protein LOC100813803 [Glycine max]
Length = 2140
Score = 51.6 bits (122), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 38/74 (51%)
Query: 5 VDVGNGERIRSEGHCSKVKFEMQGVEFEVDFHILDFSGANAGLAVQWLEKLGKIVTDHKA 64
V VGNG + + +Q F V +L SGA+ L V+WL LG ++TD+
Sbjct: 265 VMVGNGSVLDCQQMIPDTTILIQEHRFVVTLRLLPLSGADVVLGVEWLRTLGPVITDYTD 324
Query: 65 LTMEFTYRRQPIKL 78
TM+FT +PI L
Sbjct: 325 FTMKFTLFGRPIHL 338
>gi|108864287|gb|ABA92869.2| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 413
Score = 51.6 bits (122), Expect = 5e-05, Method: Composition-based stats.
Identities = 27/82 (32%), Positives = 41/82 (50%)
Query: 5 VDVGNGERIRSEGHCSKVKFEMQGVEFEVDFHILDFSGANAGLAVQWLEKLGKIVTDHKA 64
V V NG+R+ S G C+ ++ ++G F VD LD S + L +WL LG I+ D +
Sbjct: 267 VVVANGDRLVSPGRCANLRLRIEGKLFTVDCFALDISTVDIILGTEWLSTLGPILWDFRN 326
Query: 65 LTMEFTYRRQPIKLVGAQNILP 86
+ M + + L G N P
Sbjct: 327 MRMSIWRSTREVTLHGLANRRP 348
>gi|449526327|ref|XP_004170165.1| PREDICTED: uncharacterized protein LOC101232744 [Cucumis sativus]
Length = 426
Score = 51.6 bits (122), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 38/74 (51%)
Query: 7 VGNGERIRSEGHCSKVKFEMQGVEFEVDFHILDFSGANAGLAVQWLEKLGKIVTDHKALT 66
+G+G I+ +G C +VK + G DF L+ G + L +QWL LG D K L
Sbjct: 200 LGSGTTIKGKGVCEQVKLSLNGWTVTADFLPLELGGVDMILGMQWLYSLGVTEVDWKNLV 259
Query: 67 MEFTYRRQPIKLVG 80
M F + + + ++G
Sbjct: 260 MSFVHNNKKVVIIG 273
>gi|62734405|gb|AAX96514.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 575
Score = 51.6 bits (122), Expect = 6e-05, Method: Composition-based stats.
Identities = 27/82 (32%), Positives = 41/82 (50%)
Query: 5 VDVGNGERIRSEGHCSKVKFEMQGVEFEVDFHILDFSGANAGLAVQWLEKLGKIVTDHKA 64
V V NG+R+ S G C+ ++ ++G F VD LD S + L +WL LG I+ D +
Sbjct: 429 VVVANGDRLVSPGRCANLRLRIEGKLFTVDCFALDISTVDIILGTEWLSTLGPILWDFRN 488
Query: 65 LTMEFTYRRQPIKLVGAQNILP 86
+ M + + L G N P
Sbjct: 489 MRMSIWRSTREVTLHGLANRRP 510
>gi|449501536|ref|XP_004161395.1| PREDICTED: enzymatic polyprotein-like [Cucumis sativus]
Length = 740
Score = 51.2 bits (121), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 23/84 (27%), Positives = 46/84 (54%)
Query: 2 SFLVDVGNGERIRSEGHCSKVKFEMQGVEFEVDFHILDFSGANAGLAVQWLEKLGKIVTD 61
+F +G+G + G C +++ ++QG+ DF +++ +A L +QWL+ G +
Sbjct: 375 TFAATIGDGTCCKGRGLCKRLEVKLQGITVVADFLLIELGNVDAILGMQWLDTTGTMKIH 434
Query: 62 HKALTMEFTYRRQPIKLVGAQNIL 85
+LTM F R+ I+L G +++
Sbjct: 435 WPSLTMSFWVGRKQIELKGDPSLI 458
>gi|147802351|emb|CAN77123.1| hypothetical protein VITISV_013625 [Vitis vinifera]
Length = 439
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 34/65 (52%)
Query: 5 VDVGNGERIRSEGHCSKVKFEMQGVEFEVDFHILDFSGANAGLAVQWLEKLGKIVTDHKA 64
V V N E I G + +Q + D++IL + L VQWLE LG I +D+KA
Sbjct: 319 VVVANQEWIECMGQFLGLTLIIQEIPVTADYYILPMAACQVVLGVQWLETLGSIESDYKA 378
Query: 65 LTMEF 69
LTM F
Sbjct: 379 LTMSF 383
>gi|227438239|gb|ACP30609.1| disease resistance protein [Brassica rapa subsp. pekinensis]
Length = 2726
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 39/79 (49%)
Query: 2 SFLVDVGNGERIRSEGHCSKVKFEMQGVEFEVDFHILDFSGANAGLAVQWLEKLGKIVTD 61
SF + +GNG + S G C +V F++ F DF L+ + L +QWLE LG+ D
Sbjct: 1627 SFDILLGNGASVNSLGVCREVSFQLADATFTSDFIALELGMVDVILGIQWLETLGRCEVD 1686
Query: 62 HKALTMEFTYRRQPIKLVG 80
K + F + + L G
Sbjct: 1687 WKEQELSFIHGGVKVTLFG 1705
>gi|242095940|ref|XP_002438460.1| hypothetical protein SORBIDRAFT_10g020018 [Sorghum bicolor]
gi|241916683|gb|EER89827.1| hypothetical protein SORBIDRAFT_10g020018 [Sorghum bicolor]
Length = 1437
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 40/83 (48%), Gaps = 2/83 (2%)
Query: 7 VGNGERIRSEGHCSKVKFEMQGVEFEVDFHILDFSGANAGLAVQWLEKLGKIVTDHKALT 66
V NGERI G + + G F VD ++L +G + L QWL LG+I D A T
Sbjct: 383 VANGERIACPGVLRQAPIIIDGEGFCVDLYVLPLAGYDLVLGTQWLVTLGRIEWDFTART 442
Query: 67 MEFTYRRQPIKLVGAQNILPKPT 89
+ FT RQ ++ + P P
Sbjct: 443 LSFT--RQDRRVCWSDVATPTPA 463
>gi|242085414|ref|XP_002443132.1| hypothetical protein SORBIDRAFT_08g010830 [Sorghum bicolor]
gi|241943825|gb|EES16970.1| hypothetical protein SORBIDRAFT_08g010830 [Sorghum bicolor]
Length = 1462
Score = 49.7 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 25/63 (39%), Positives = 31/63 (49%)
Query: 7 VGNGERIRSEGHCSKVKFEMQGVEFEVDFHILDFSGANAGLAVQWLEKLGKIVTDHKALT 66
V NGERI G + F +QG F D I+ +G + L QWL LG + D A T
Sbjct: 373 VANGERIACPGVLPQAPFVIQGSSFTADLFIMPLAGFDVVLGAQWLGTLGPVTWDFTART 432
Query: 67 MEF 69
M F
Sbjct: 433 MSF 435
>gi|147765520|emb|CAN60437.1| hypothetical protein VITISV_035177 [Vitis vinifera]
Length = 818
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/71 (39%), Positives = 38/71 (53%)
Query: 10 GERIRSEGHCSKVKFEMQGVEFEVDFHILDFSGANAGLAVQWLEKLGKIVTDHKALTMEF 69
G ++ EG C V+ +QGV+ D LD G++ L +QWLE LGKI + K LTM F
Sbjct: 265 GVSVKGEGVCRGVQLLLQGVKIVEDVMPLDLGGSDFILGMQWLETLGKIKFNCKTLTMWF 324
Query: 70 TYRRQPIKLVG 80
+ L G
Sbjct: 325 KVGESTMTLQG 335
>gi|9294238|dbj|BAB02140.1| unnamed protein product [Arabidopsis thaliana]
Length = 904
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 40/79 (50%)
Query: 5 VDVGNGERIRSEGHCSKVKFEMQGVEFEVDFHILDFSGANAGLAVQWLEKLGKIVTDHKA 64
V V +G ++R +G + +++Q F D ++ + L VQWL LG+I + +
Sbjct: 278 VSVADGRKLRVDGKITDFTWKLQTTSFASDILMIPLQVIDMVLGVQWLATLGRISWEFQK 337
Query: 65 LTMEFTYRRQPIKLVGAQN 83
M F Y+ Q I L G Q+
Sbjct: 338 FEMRFKYKNQKILLHGLQS 356
>gi|147822176|emb|CAN68077.1| hypothetical protein VITISV_042019 [Vitis vinifera]
Length = 480
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 39/74 (52%)
Query: 7 VGNGERIRSEGHCSKVKFEMQGVEFEVDFHILDFSGANAGLAVQWLEKLGKIVTDHKALT 66
V +G RI S+ + + MQG EF+VD ++ G + L +QWL +LG I+ D K L
Sbjct: 273 VVDGTRITSDATYRQSTWNMQGKEFQVDLRLIPLGGYDMVLGIQWLAELGPILWDFKNLR 332
Query: 67 MEFTYRRQPIKLVG 80
+F + L G
Sbjct: 333 XKFIVDGRKFMLRG 346
>gi|14626274|gb|AAK71542.1|AC087852_2 putative reverse transcriptase [Oryza sativa Japonica Group]
gi|108711059|gb|ABF98854.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 258
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 35/77 (45%)
Query: 7 VGNGERIRSEGHCSKVKFEMQGVEFEVDFHILDFSGANAGLAVQWLEKLGKIVTDHKALT 66
V NGE++ G + + G F VD ++ +G + L QW+ LG IV D T
Sbjct: 81 VANGEKVACPGVIRQAVLSIDGSLFTVDLFVIPLAGYDMVLGTQWMASLGPIVWDFTERT 140
Query: 67 MEFTYRRQPIKLVGAQN 83
M F Y + I G +
Sbjct: 141 MSFQYHGRTICWAGVPS 157
>gi|147864527|emb|CAN80491.1| hypothetical protein VITISV_042679 [Vitis vinifera]
Length = 1412
Score = 48.9 bits (115), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 36/80 (45%)
Query: 5 VDVGNGERIRSEGHCSKVKFEMQGVEFEVDFHILDFSGANAGLAVQWLEKLGKIVTDHKA 64
V V NG+ + CS ++ MQG EF + ++L + L QWL LG I +
Sbjct: 429 VTVANGQELHCTALCSDFRWRMQGQEFIAEVYVLPLETYDLILGTQWLATLGDISWNFNT 488
Query: 65 LTMEFTYRRQPIKLVGAQNI 84
L M F +P L G +
Sbjct: 489 LQMGFELNGKPYLLQGKNKL 508
>gi|147852240|emb|CAN80132.1| hypothetical protein VITISV_012031 [Vitis vinifera]
Length = 1371
Score = 48.1 bits (113), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 35/80 (43%)
Query: 5 VDVGNGERIRSEGHCSKVKFEMQGVEFEVDFHILDFSGANAGLAVQWLEKLGKIVTDHKA 64
V V NG + CS ++ MQG EF + ++L + L QWL LG I +
Sbjct: 429 VTVANGHELHCTALCSDFRWRMQGQEFIAEVYVLPLETYDLILGTQWLATLGDISWNFNT 488
Query: 65 LTMEFTYRRQPIKLVGAQNI 84
L M F +P L G +
Sbjct: 489 LQMGFELNGKPYLLQGKNKL 508
>gi|124359710|gb|ABN06064.1| RNA-directed DNA polymerase (Reverse transcriptase); Chromo; Zinc
finger, CCHC-type; Peptidase aspartic, active site;
Polynucleotidyl transferase, Ribonuclease H fold
[Medicago truncatula]
Length = 1297
Score = 47.8 bits (112), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 24/95 (25%), Positives = 48/95 (50%), Gaps = 2/95 (2%)
Query: 5 VDVGNGERIRSEGHCSKVKFEMQGVEFEVDFHILDFSGANAGLAVQWLEKLGKIVTDHKA 64
+ +G+G +++G C ++ ++ V E+D + D G + L ++WL LG ++ +
Sbjct: 223 IKLGDGSYSKTKGTCEGLEVDVGDVHLEIDAQLFDLGGVDMVLGIEWLRTLGDMIVNWNK 282
Query: 65 LTMEFTYRRQPIKLVG--AQNILPKPTQSIHLQSR 97
TM F + ++ + + G Q QSI +SR
Sbjct: 283 QTMSFWHNKKWVTVKGMDTQGGAIATLQSIICKSR 317
>gi|222636869|gb|EEE67001.1| hypothetical protein OsJ_23913 [Oryza sativa Japonica Group]
Length = 877
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 32/61 (52%)
Query: 7 VGNGERIRSEGHCSKVKFEMQGVEFEVDFHILDFSGANAGLAVQWLEKLGKIVTDHKALT 66
+ NG+R+ S G C + + G F VD LD + L +QWL+ LG I+ D K +
Sbjct: 669 MANGDRLVSPGLCRNLALNIDGEAFSVDCFALDLCAVDIILGMQWLQTLGPILWDFKNMR 728
Query: 67 M 67
M
Sbjct: 729 M 729
>gi|15451607|gb|AAK98731.1|AC090485_10 Putative retroelement [Oryza sativa Japonica Group]
gi|108706172|gb|ABF93967.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 1461
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/77 (28%), Positives = 37/77 (48%)
Query: 7 VGNGERIRSEGHCSKVKFEMQGVEFEVDFHILDFSGANAGLAVQWLEKLGKIVTDHKALT 66
V NGE++ G ++G+ F VD +++ +G + L QW+ KLG++ D
Sbjct: 390 VANGEKVACPGVLRHAPITIEGMPFHVDLYVMPLAGYDIVLGTQWMAKLGRMSWDVTTRA 449
Query: 67 MEFTYRRQPIKLVGAQN 83
+ F + I GA N
Sbjct: 450 LTFDLEGRTICWQGAPN 466
>gi|387965727|gb|AFK13856.1| Ty3/gypsy retrotransposon protein [Beta vulgaris subsp. vulgaris]
Length = 1631
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 38/79 (48%), Gaps = 1/79 (1%)
Query: 3 FLVDVGNGERIRSEGHCSKVKFEMQGVEFEV-DFHILDFSGANAGLAVQWLEKLGKIVTD 61
F V +G+G+ +R G C V + G V DF L ++ L VQWLE LG +V++
Sbjct: 525 FGVSLGDGQAVRGTGICRAVALYLDGGLVVVEDFLPLGLGNSDVILGVQWLETLGTVVSN 584
Query: 62 HKALTMEFTYRRQPIKLVG 80
K M F P L G
Sbjct: 585 WKTQKMSFQLGGVPYTLTG 603
>gi|242070717|ref|XP_002450635.1| hypothetical protein SORBIDRAFT_05g008466 [Sorghum bicolor]
gi|241936478|gb|EES09623.1| hypothetical protein SORBIDRAFT_05g008466 [Sorghum bicolor]
Length = 1507
Score = 47.0 bits (110), Expect = 0.001, Method: Composition-based stats.
Identities = 23/74 (31%), Positives = 35/74 (47%)
Query: 7 VGNGERIRSEGHCSKVKFEMQGVEFEVDFHILDFSGANAGLAVQWLEKLGKIVTDHKALT 66
V NGER+ +G + GV F D ++ +G + L +WL LG IV D +
Sbjct: 463 VANGERVTCDGVIRDAPLLIDGVTFPADLFVMPLAGYDVVLGTRWLGALGPIVWDLSSRR 522
Query: 67 MEFTYRRQPIKLVG 80
M F + +P+ G
Sbjct: 523 MTFQHLGRPVSWTG 536
>gi|124360394|gb|ABN08407.1| Peptidase aspartic, active site [Medicago truncatula]
Length = 435
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 44/87 (50%)
Query: 5 VDVGNGERIRSEGHCSKVKFEMQGVEFEVDFHILDFSGANAGLAVQWLEKLGKIVTDHKA 64
+ +G+G + + G C V +QGVE+E+D + + G + L + WL ++G D
Sbjct: 183 IRLGDGHVVPTLGECHGVIISVQGVEWEIDVMLFELRGYDLVLGMAWLTQIGCTCIDWVE 242
Query: 65 LTMEFTYRRQPIKLVGAQNILPKPTQS 91
M F Y+ + I++ G + P Q+
Sbjct: 243 KKMRFDYQGEWIEIRGIRTRECTPLQN 269
>gi|124360392|gb|ABN08405.1| Peptidase aspartic, active site [Medicago truncatula]
Length = 435
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 44/87 (50%)
Query: 5 VDVGNGERIRSEGHCSKVKFEMQGVEFEVDFHILDFSGANAGLAVQWLEKLGKIVTDHKA 64
+ +G+G + + G C V +QGVE+E+D + + G + L + WL ++G D
Sbjct: 183 IRLGDGHVVPTLGECHGVIISVQGVEWEIDVMLFELRGYDLVLGMAWLTQIGCTCIDWVE 242
Query: 65 LTMEFTYRRQPIKLVGAQNILPKPTQS 91
M F Y+ + I++ G + P Q+
Sbjct: 243 KKMRFDYQGEWIEIRGIRTRECTPLQN 269
>gi|12324281|gb|AAG52110.1|AC023064_3 hypothetical protein; 60873-62443 [Arabidopsis thaliana]
Length = 508
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/90 (26%), Positives = 43/90 (47%)
Query: 5 VDVGNGERIRSEGHCSKVKFEMQGVEFEVDFHILDFSGANAGLAVQWLEKLGKIVTDHKA 64
V V +G + K ++E++G + + D ++ G + L QWLE LG I D K
Sbjct: 393 VSVADGRLLGLNAKIDKFQWELRGTQLQADLMVITLRGCDMVLGAQWLETLGPITCDFKK 452
Query: 65 LTMEFTYRRQPIKLVGAQNILPKPTQSIHL 94
M+F ++ + L G + + ++I L
Sbjct: 453 SVMQFHIGQKKVPLQGIRQGSVRDVKAIKL 482
>gi|12322951|gb|AAG51467.1|AC069160_13 hypothetical protein, 5' partial [Arabidopsis thaliana]
Length = 368
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 37/76 (48%)
Query: 5 VDVGNGERIRSEGHCSKVKFEMQGVEFEVDFHILDFSGANAGLAVQWLEKLGKIVTDHKA 64
V V +G + K ++E++G + + D ++ G + L QWLE LG I D K
Sbjct: 253 VSVADGRLLGLNAKIDKFQWELRGTQLQADLMVITLRGCDMVLGAQWLETLGPITCDFKK 312
Query: 65 LTMEFTYRRQPIKLVG 80
M+F ++ + L G
Sbjct: 313 SVMQFHIGQKKVPLQG 328
>gi|449496938|ref|XP_004160268.1| PREDICTED: uncharacterized protein LOC101232747 [Cucumis sativus]
Length = 701
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 42/82 (51%)
Query: 3 FLVDVGNGERIRSEGHCSKVKFEMQGVEFEVDFHILDFSGANAGLAVQWLEKLGKIVTDH 62
F V++GNG R G C +VK +++ + DF ++ + L +QWL+ G +
Sbjct: 344 FGVNIGNGTRCEGRGICKRVKVKLKELTIVADFLAVELGKVDLVLGMQWLDSTGTMKVHW 403
Query: 63 KALTMEFTYRRQPIKLVGAQNI 84
+LTM F + + I L G ++
Sbjct: 404 PSLTMTFWTKGRRIILKGDSSL 425
>gi|449466919|ref|XP_004151173.1| PREDICTED: uncharacterized protein LOC101214111 [Cucumis sativus]
Length = 503
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 40/78 (51%)
Query: 3 FLVDVGNGERIRSEGHCSKVKFEMQGVEFEVDFHILDFSGANAGLAVQWLEKLGKIVTDH 62
F+V +G+ R + G C +V+ +Q + DF ++ + L +QWL+ +G +
Sbjct: 275 FVVTIGDDTRCKGRGVCKRVELRLQELTIIADFLAVELGNVDLVLGMQWLDTIGTMKVHW 334
Query: 63 KALTMEFTYRRQPIKLVG 80
+LTM F + + I L G
Sbjct: 335 PSLTMTFLAKDKKIVLKG 352
>gi|115487072|ref|NP_001066023.1| Os12g0121200 [Oryza sativa Japonica Group]
gi|113648530|dbj|BAF29042.1| Os12g0121200, partial [Oryza sativa Japonica Group]
Length = 461
Score = 46.2 bits (108), Expect = 0.003, Method: Composition-based stats.
Identities = 22/65 (33%), Positives = 33/65 (50%)
Query: 5 VDVGNGERIRSEGHCSKVKFEMQGVEFEVDFHILDFSGANAGLAVQWLEKLGKIVTDHKA 64
V V NG+R+ S G C + + EF++DF+ L G + L QWL LG + D
Sbjct: 46 VAVANGDRVPSPGRCPPQRVSIGSHEFDIDFYALPLGGYDIVLGAQWLGTLGPTLWDFSR 105
Query: 65 LTMEF 69
++ F
Sbjct: 106 QSLAF 110
>gi|218199463|gb|EEC81890.1| hypothetical protein OsI_25707 [Oryza sativa Indica Group]
Length = 839
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 31/61 (50%)
Query: 7 VGNGERIRSEGHCSKVKFEMQGVEFEVDFHILDFSGANAGLAVQWLEKLGKIVTDHKALT 66
V NG+R+ S G C + + F VD LD + L +QWL+ LG I+ D K +
Sbjct: 631 VANGDRLVSPGLCRNLTLNIDDEAFSVDCFALDLCAVDIILGMQWLQTLGPILWDFKNMR 690
Query: 67 M 67
M
Sbjct: 691 M 691
>gi|115457202|ref|NP_001052201.1| Os04g0191000 [Oryza sativa Japonica Group]
gi|38346036|emb|CAE01900.2| OSJNBa0059D20.8 [Oryza sativa Japonica Group]
gi|113563772|dbj|BAF14115.1| Os04g0191000 [Oryza sativa Japonica Group]
Length = 1463
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 39/90 (43%), Gaps = 5/90 (5%)
Query: 7 VGNGERIRSEGHCSKVKFEMQGVEFEVDFHILDFSGANAGLAVQWLEKLGKIVTDHKALT 66
V NGER+ G F + G F D ++ +G + L +WL LG IV D + +
Sbjct: 387 VANGERVACPGVIRDAAFTINGSTFHTDLFVMPLAGFDVVLGTRWLGTLGPIVWDFTSRS 446
Query: 67 MEFTYRRQPIKLVGAQNILPKPTQSIHLQS 96
M F Q G + T + HL++
Sbjct: 447 MAFQRDGQRFAWKGVAS-----TSTTHLRT 471
>gi|356573714|ref|XP_003555002.1| PREDICTED: uncharacterized protein LOC100810380 [Glycine max]
Length = 1273
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 47/98 (47%)
Query: 3 FLVDVGNGERIRSEGHCSKVKFEMQGVEFEVDFHILDFSGANAGLAVQWLEKLGKIVTDH 62
F V V NG + G ++ + QG F++ +L SGA+ L WL+ LG + D+
Sbjct: 357 FKVMVDNGNYMTPIGMIRELSIQAQGNRFQLPVFLLPISGADLILGAIWLKTLGSHIADY 416
Query: 63 KALTMEFTYRRQPIKLVGAQNILPKPTQSIHLQSRIFT 100
+L ++F + + I L G + P H++ I T
Sbjct: 417 DSLQIKFLHDGKFITLQGDDDGTPTQAHLHHIRRMIST 454
>gi|359496850|ref|XP_003635354.1| PREDICTED: uncharacterized protein LOC100854728 [Vitis vinifera]
Length = 2807
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 29/44 (65%)
Query: 37 ILDFSGANAGLAVQWLEKLGKIVTDHKALTMEFTYRRQPIKLVG 80
IL G + L +QWL++LG++ D+ AL+MEF + +PI L G
Sbjct: 414 ILPIEGPDVVLGIQWLQQLGRVAHDYAALSMEFCWEGRPIILHG 457
>gi|293331925|ref|NP_001168083.1| uncharacterized protein LOC100381817 [Zea mays]
gi|223945897|gb|ACN27032.1| unknown [Zea mays]
Length = 117
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 27/55 (49%)
Query: 4 LVDVGNGERIRSEGHCSKVKFEMQGVEFEVDFHILDFSGANAGLAVQWLEKLGKI 58
+V V NG R++ HC + +Q F DF ILD +A L + WL + +
Sbjct: 60 VVQVANGARLQCSAHCPATAWSVQEFTFSTDFKILDVFSYDAILGIDWLSQFSPM 114
>gi|242065034|ref|XP_002453806.1| hypothetical protein SORBIDRAFT_04g018075 [Sorghum bicolor]
gi|241933637|gb|EES06782.1| hypothetical protein SORBIDRAFT_04g018075 [Sorghum bicolor]
Length = 1414
Score = 45.1 bits (105), Expect = 0.005, Method: Composition-based stats.
Identities = 21/66 (31%), Positives = 32/66 (48%)
Query: 7 VGNGERIRSEGHCSKVKFEMQGVEFEVDFHILDFSGANAGLAVQWLEKLGKIVTDHKALT 66
V NGE+I G + F +D ++ +G + L QW+ LG IV D A +
Sbjct: 342 VANGEKIPCPGVIRHAPVTIDNTTFAIDLFVMPLAGYDIVLGTQWMATLGPIVWDFAARS 401
Query: 67 MEFTYR 72
+ FTY+
Sbjct: 402 LSFTYQ 407
>gi|115481476|ref|NP_001064331.1| Os10g0317000 [Oryza sativa Japonica Group]
gi|15217201|gb|AAK92545.1|AC051624_3 Putative retroelement [Oryza sativa Japonica Group]
gi|31431040|gb|AAP52878.1| retrotransposon protein, putative, unclassified, expressed [Oryza
sativa Japonica Group]
gi|113638940|dbj|BAF26245.1| Os10g0317000 [Oryza sativa Japonica Group]
Length = 1476
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 44/91 (48%), Gaps = 4/91 (4%)
Query: 7 VGNGERIRSEGHCSKVKFEMQGVEFEVDFHILDFSGANAGLAVQWLEKLG-KIVTDHKAL 65
V NGE++ G + +QG+ F+VD +++ +G + L QW+ LG I D
Sbjct: 385 VANGEKVSCPGVLRRAPITIQGMAFDVDLYVMPLAGYDMVLGTQWMAHLGTTIAWDVTTG 444
Query: 66 TMEFTYRRQPIKLVGAQNILPKPTQSIHLQS 96
T+ F ++ + V Q++ P +H S
Sbjct: 445 TVSFQHQG---RTVSWQSLPPHQRADVHAVS 472
>gi|78183241|emb|CAJ00278.1| hypothetical protein [Lotus japonicus]
Length = 1508
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 37/74 (50%)
Query: 5 VDVGNGERIRSEGHCSKVKFEMQGVEFEVDFHILDFSGANAGLAVQWLEKLGKIVTDHKA 64
+ V +G I+ G C + ++MQG F + + S + L +QWL + GKI D
Sbjct: 422 ITVADGGIIQGTGWCEGISWKMQGYTFTDNAIAIPLSSCDLILGMQWLRQRGKISWDFTN 481
Query: 65 LTMEFTYRRQPIKL 78
L MEF + ++L
Sbjct: 482 LIMEFAMGTEMVRL 495
>gi|78183249|emb|CAJ00277.1| hypothetical protein [Lotus japonicus]
Length = 1508
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 37/74 (50%)
Query: 5 VDVGNGERIRSEGHCSKVKFEMQGVEFEVDFHILDFSGANAGLAVQWLEKLGKIVTDHKA 64
+ V +G I+ G C + ++MQG F + + S + L +QWL + GKI D
Sbjct: 422 ITVADGGIIQGTGWCEGISWKMQGYTFTDNAIAIPLSSCDLILGMQWLRQRGKISWDFTN 481
Query: 65 LTMEFTYRRQPIKL 78
L MEF + ++L
Sbjct: 482 LIMEFAMGTEMVRL 495
>gi|78183243|emb|CAJ00274.1| hypothetical protein [Lotus japonicus]
Length = 1508
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 37/74 (50%)
Query: 5 VDVGNGERIRSEGHCSKVKFEMQGVEFEVDFHILDFSGANAGLAVQWLEKLGKIVTDHKA 64
+ V +G I+ G C + ++MQG F + + S + L +QWL + GKI D
Sbjct: 422 ITVADGGIIQGTGWCEGISWKMQGYTFTDNAIAIPLSSCDLILGMQWLRQRGKISWDFTN 481
Query: 65 LTMEFTYRRQPIKL 78
L MEF + ++L
Sbjct: 482 LIMEFAVGTEMVRL 495
>gi|78183245|emb|CAJ00275.1| hypothetical protein [Lotus japonicus]
Length = 1112
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 37/74 (50%)
Query: 5 VDVGNGERIRSEGHCSKVKFEMQGVEFEVDFHILDFSGANAGLAVQWLEKLGKIVTDHKA 64
+ V +G I+ G C + ++MQG F + + S + L +QWL + GKI D
Sbjct: 422 ITVADGGIIQGTGWCEGISWKMQGYTFTDNAIAIPLSSCDLILGMQWLRQRGKISWDFTN 481
Query: 65 LTMEFTYRRQPIKL 78
L MEF + ++L
Sbjct: 482 LIMEFAMGTEMVRL 495
>gi|15042811|gb|AAK82434.1|AC091247_1 putative polyprotein, 5'-partial [Oryza sativa Japonica Group]
Length = 799
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 39/79 (49%)
Query: 5 VDVGNGERIRSEGHCSKVKFEMQGVEFEVDFHILDFSGANAGLAVQWLEKLGKIVTDHKA 64
V V NGE + + S+ + +QG +F +L G + L + WL + + D A
Sbjct: 169 VRVANGEVLVCDAKISQFDWWVQGHQFSFPVRVLPMGGYDLVLGMDWLTQYSPMTCDWAA 228
Query: 65 LTMEFTYRRQPIKLVGAQN 83
++F+Y+ IKL G Q+
Sbjct: 229 KWLQFSYQGSLIKLQGIQS 247
>gi|449524806|ref|XP_004169412.1| PREDICTED: uncharacterized protein LOC101228221 [Cucumis sativus]
Length = 703
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 42/86 (48%), Gaps = 3/86 (3%)
Query: 14 RSEGHCSKVKFEMQGVEFEVDFHILDFSGANAGLAVQWLEKLGKIVTDHKALTMEFTYRR 73
R+ G C V + + DF L A+ L V WLE LGK++ ++K MEF+
Sbjct: 370 RATGMCKSVNLTIVNLSITHDFLPLPLGSADVNLGVTWLETLGKVIFNYKLSEMEFSLGE 429
Query: 74 QPIKLVGAQNILPKPTQSIHLQSRIF 99
+ L G ++++ + L+S IF
Sbjct: 430 FLVILQGNKSLV---KSQVSLKSMIF 452
>gi|18855070|gb|AAL79762.1|AC096687_26 putative polyprotein [Oryza sativa Japonica Group]
gi|108711868|gb|ABF99663.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 1087
Score = 44.7 bits (104), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 39/79 (49%)
Query: 5 VDVGNGERIRSEGHCSKVKFEMQGVEFEVDFHILDFSGANAGLAVQWLEKLGKIVTDHKA 64
V V NGE + + S+ + +QG +F +L G + L + WL + + D A
Sbjct: 457 VRVANGEVLVCDAKISQFDWWVQGHQFSFPVRVLPMGGYDLVLGMDWLTQYSPMTCDWAA 516
Query: 65 LTMEFTYRRQPIKLVGAQN 83
++F+Y+ IKL G Q+
Sbjct: 517 KWLQFSYQGSLIKLQGIQS 535
>gi|77555174|gb|ABA97970.1| retrotransposon protein, putative, unclassified, expressed [Oryza
sativa Japonica Group]
Length = 1548
Score = 44.3 bits (103), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 35/79 (44%)
Query: 5 VDVGNGERIRSEGHCSKVKFEMQGVEFEVDFHILDFSGANAGLAVQWLEKLGKIVTDHKA 64
V V NGE + E + + +QG EF +L G + L + WL + + D A
Sbjct: 463 VRVANGETLCCEAKVPQFAWWVQGHEFSFPMRVLPMGGYDLVLGMDWLTQFSPMTCDWAA 522
Query: 65 LTMEFTYRRQPIKLVGAQN 83
++F+Y I L G Q
Sbjct: 523 KQLQFSYNGSVITLKGIQT 541
>gi|449455495|ref|XP_004145488.1| PREDICTED: uncharacterized protein LOC101209704 [Cucumis sativus]
Length = 1503
Score = 44.3 bits (103), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 39/78 (50%)
Query: 3 FLVDVGNGERIRSEGHCSKVKFEMQGVEFEVDFHILDFSGANAGLAVQWLEKLGKIVTDH 62
F V +GNG + G C +VK +++ + DF ++ + L +QWL+ G +
Sbjct: 673 FGVTIGNGNQCEGSGICKRVKVKLKELTIVADFLAVELGTVDLVLGMQWLDSTGTMKVHW 732
Query: 63 KALTMEFTYRRQPIKLVG 80
+LTM F + + I L G
Sbjct: 733 PSLTMTFWMKGRRIILKG 750
>gi|28209489|gb|AAO37507.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 1155
Score = 44.3 bits (103), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 40/82 (48%)
Query: 2 SFLVDVGNGERIRSEGHCSKVKFEMQGVEFEVDFHILDFSGANAGLAVQWLEKLGKIVTD 61
S LV V NG+ + + + +QG F D ++ G +A L + WLE+ G++
Sbjct: 434 STLVKVANGDCLPCQYVVPSFSWWIQGHTFTYDMRVVTLEGHDAILGMDWLEQWGEMSCH 493
Query: 62 HKALTMEFTYRRQPIKLVGAQN 83
T++F Y+ I L G Q+
Sbjct: 494 WANKTLKFQYQGSWISLQGVQD 515
>gi|108864659|gb|ABA95357.2| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 2811
Score = 43.9 bits (102), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 37/76 (48%)
Query: 5 VDVGNGERIRSEGHCSKVKFEMQGVEFEVDFHILDFSGANAGLAVQWLEKLGKIVTDHKA 64
V V NG + K+E+QG +F DF +L + L + WLEK + + +A
Sbjct: 1854 VKVANGAVLSCTSELPAAKWEVQGHQFSTDFKLLPLDNYDMILGMDWLEKYSPMDINWQA 1913
Query: 65 LTMEFTYRRQPIKLVG 80
T++F + ++L G
Sbjct: 1914 KTIQFGLHDKSVELKG 1929
>gi|449450213|ref|XP_004142858.1| PREDICTED: uncharacterized protein LOC101220049 [Cucumis sativus]
Length = 250
Score = 43.9 bits (102), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 36/70 (51%), Gaps = 1/70 (1%)
Query: 2 SFLVDVGNGERIRSEGHCSKVKFEMQGVEFEVDFHILDFSGANAGLAVQWLEKLGKIVTD 61
++ V +G+G I+ +G C +VK + G DF L+ G + L +QWL LG D
Sbjct: 68 NYGVILGSGTAIKGKGVCEQVKLNLNGWMITTDFLPLELGGVDVILGMQWLYSLGVTEVD 127
Query: 62 -HKALTMEFT 70
KAL + T
Sbjct: 128 WKKALEIRIT 137
>gi|297724521|ref|NP_001174624.1| Os06g0170800 [Oryza sativa Japonica Group]
gi|215766712|dbj|BAG98940.1| unnamed protein product [Oryza sativa Japonica Group]
gi|255676759|dbj|BAH93352.1| Os06g0170800 [Oryza sativa Japonica Group]
Length = 263
Score = 43.9 bits (102), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 37/76 (48%)
Query: 5 VDVGNGERIRSEGHCSKVKFEMQGVEFEVDFHILDFSGANAGLAVQWLEKLGKIVTDHKA 64
V V NG + K+E+QG +F DF +L + L + WLEK + + +A
Sbjct: 61 VKVANGAVLSCTSELPAAKWEVQGHQFSTDFKLLPLDNYDMILGMDWLEKYSPMDINWQA 120
Query: 65 LTMEFTYRRQPIKLVG 80
T++F + ++L G
Sbjct: 121 KTIQFGLLDKSVELKG 136
>gi|449504804|ref|XP_004162299.1| PREDICTED: uncharacterized protein LOC101228789 [Cucumis sativus]
Length = 250
Score = 43.9 bits (102), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 36/70 (51%), Gaps = 1/70 (1%)
Query: 2 SFLVDVGNGERIRSEGHCSKVKFEMQGVEFEVDFHILDFSGANAGLAVQWLEKLGKIVTD 61
++ V +G+G I+ +G C +VK + G DF L+ G + L +QWL LG D
Sbjct: 68 NYGVILGSGTAIKGKGVCEQVKLNLNGWMITTDFLPLELGGVDVILGMQWLYSLGVTEVD 127
Query: 62 -HKALTMEFT 70
KAL + T
Sbjct: 128 WKKALEIRIT 137
>gi|449474333|ref|XP_004154142.1| PREDICTED: enzymatic polyprotein-like, partial [Cucumis sativus]
Length = 566
Score = 43.9 bits (102), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 39/78 (50%)
Query: 3 FLVDVGNGERIRSEGHCSKVKFEMQGVEFEVDFHILDFSGANAGLAVQWLEKLGKIVTDH 62
F V +GNG + G C +VK +++ + DF ++ + L +QWL+ G +
Sbjct: 206 FGVTIGNGNQCEGSGICKRVKVKLKELTIVADFLAVELGTVDLVLGMQWLDSTGTMKVHW 265
Query: 63 KALTMEFTYRRQPIKLVG 80
+LTM F + + I L G
Sbjct: 266 PSLTMTFWTKGRRIILKG 283
>gi|147807720|emb|CAN66553.1| hypothetical protein VITISV_018166 [Vitis vinifera]
Length = 1448
Score = 43.5 bits (101), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 40/83 (48%)
Query: 2 SFLVDVGNGERIRSEGHCSKVKFEMQGVEFEVDFHILDFSGANAGLAVQWLEKLGKIVTD 61
S+ V +G G ++ +G C V MQG+ DF L+ + L + WL LG + +
Sbjct: 42 SYEVMMGTGISVKGKGICRGVCISMQGLTVVEDFLPLELGNTDVILGMPWLGTLGDVKVN 101
Query: 62 HKALTMEFTYRRQPIKLVGAQNI 84
K LTM+ + I L G ++
Sbjct: 102 WKMLTMKIKMGKAVIVLKGDPSL 124
>gi|147867197|emb|CAN82051.1| hypothetical protein VITISV_042770 [Vitis vinifera]
Length = 429
Score = 43.5 bits (101), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 20/40 (50%), Positives = 25/40 (62%)
Query: 41 SGANAGLAVQWLEKLGKIVTDHKALTMEFTYRRQPIKLVG 80
G + L +QWLE LG +V D + LTMEF + Q KLVG
Sbjct: 147 DGLDIVLGIQWLELLGSVVCDWRELTMEFMWENQTKKLVG 186
>gi|108862706|gb|ABA98602.2| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 2202
Score = 43.5 bits (101), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 37/80 (46%)
Query: 1 MSFLVDVGNGERIRSEGHCSKVKFEMQGVEFEVDFHILDFSGANAGLAVQWLEKLGKIVT 60
+SF V V NG+ + E + V + +QG F +L + L + WLE+ +
Sbjct: 793 VSFQVKVANGQMLSCETELANVSWSVQGHHFCSALKVLPLQSYDMILGMDWLERYSPMDI 852
Query: 61 DHKALTMEFTYRRQPIKLVG 80
D + T+ FT Q I L G
Sbjct: 853 DWQQKTIRFTLDGQLITLCG 872
>gi|449470602|ref|XP_004153005.1| PREDICTED: uncharacterized protein LOC101220479 [Cucumis sativus]
Length = 583
Score = 43.5 bits (101), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 39/78 (50%)
Query: 3 FLVDVGNGERIRSEGHCSKVKFEMQGVEFEVDFHILDFSGANAGLAVQWLEKLGKIVTDH 62
F V +GNG + G C +VK +++ + DF ++ + L +QWL+ G +
Sbjct: 392 FGVTIGNGNQCEGSGICKRVKVKLKELTIVADFLAVELGTVDLVLGMQWLDSTGTMKVHW 451
Query: 63 KALTMEFTYRRQPIKLVG 80
+LTM F + + I L G
Sbjct: 452 PSLTMTFWMKGRRIILKG 469
>gi|110289660|gb|AAP55181.2| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 1459
Score = 43.5 bits (101), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 21/76 (27%), Positives = 35/76 (46%)
Query: 5 VDVGNGERIRSEGHCSKVKFEMQGVEFEVDFHILDFSGANAGLAVQWLEKLGKIVTDHKA 64
V + +G + + K+ MQG F +F +L+ G + L + WLE+ + D
Sbjct: 659 VQLADGGSLLCSHEIANCKWWMQGHSFSSNFRLLNLGGYDIILGMDWLEQFSPMQVDWSQ 718
Query: 65 LTMEFTYRRQPIKLVG 80
ME QP++L G
Sbjct: 719 KWMEIQVNNQPVRLQG 734
>gi|440577416|emb|CCI55439.1| PH01B031C15.22 [Phyllostachys edulis]
Length = 267
Score = 43.1 bits (100), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 39/94 (41%), Gaps = 4/94 (4%)
Query: 5 VDVGNGERIRSEGHCSKVKFEMQGVEFEVDFHILDFSGANAGLAVQWLEKLGKIVTDHKA 64
V V NG+ + S G C + +F +DF + G + L VQWL LG I D
Sbjct: 108 VAVANGDHVTSGGICRATLISIDKEDFILDFLTIPLDGFDVVLGVQWLGSLGPITWDFHH 167
Query: 65 LTMEFTYRRQPIKLVGAQNILPKPTQSIHLQSRI 98
M F + + I GA P HL + I
Sbjct: 168 RMMRFQRQGREIVWHGAN----PPGAGPHLHTAI 197
>gi|242093834|ref|XP_002437407.1| hypothetical protein SORBIDRAFT_10g026363 [Sorghum bicolor]
gi|241915630|gb|EER88774.1| hypothetical protein SORBIDRAFT_10g026363 [Sorghum bicolor]
Length = 1609
Score = 43.1 bits (100), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 32/66 (48%)
Query: 5 VDVGNGERIRSEGHCSKVKFEMQGVEFEVDFHILDFSGANAGLAVQWLEKLGKIVTDHKA 64
V V NG+R+ G V ++ F+VD + + + L + WL LG I+ D
Sbjct: 552 VTVANGDRVLCRGLARGVNLQIGMEVFKVDCYAIPLDSCDMVLGIAWLRTLGPILWDFDN 611
Query: 65 LTMEFT 70
L MEF+
Sbjct: 612 LRMEFS 617
>gi|18652523|gb|AAL77156.1|AC091732_7 Putative polyprotein [Oryza sativa Japonica Group]
gi|21672107|gb|AAM74469.1|AC124213_27 Putative retroelement [Oryza sativa Japonica Group]
gi|31431768|gb|AAP53494.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 999
Score = 43.1 bits (100), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 33/62 (53%), Gaps = 1/62 (1%)
Query: 19 CSKVKFEMQGVEFEVDFHILDFSGANAGLAVQWLEKLGKIVTDHKALTMEFTYRRQPIKL 78
C +V+ QG F DF IL G + L ++W E I+ D + T+ FTY++Q + L
Sbjct: 360 CKEVQ-TTQGQTFVTDFKILALGGYDMILGMEWPEAFSPILVDWQKKTLNFTYQQQRVTL 418
Query: 79 VG 80
G
Sbjct: 419 TG 420
>gi|449462405|ref|XP_004148931.1| PREDICTED: uncharacterized protein LOC101213941 [Cucumis sativus]
Length = 902
Score = 43.1 bits (100), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 39/78 (50%)
Query: 3 FLVDVGNGERIRSEGHCSKVKFEMQGVEFEVDFHILDFSGANAGLAVQWLEKLGKIVTDH 62
F V +GNG + G C +VK +++ + DF ++ + L +QWL+ G +
Sbjct: 399 FGVTIGNGNQCEGSGICKRVKVKLKELTIVADFLAVELGTVDLVLGMQWLDSTGTMKVHW 458
Query: 63 KALTMEFTYRRQPIKLVG 80
+LTM F + + I L G
Sbjct: 459 PSLTMTFWTKGRRIILKG 476
>gi|449449136|ref|XP_004142321.1| PREDICTED: uncharacterized protein LOC101219643 [Cucumis sativus]
Length = 648
Score = 43.1 bits (100), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 39/78 (50%)
Query: 3 FLVDVGNGERIRSEGHCSKVKFEMQGVEFEVDFHILDFSGANAGLAVQWLEKLGKIVTDH 62
F V +GNG + G C +VK +++ + DF ++ + L +QWL+ G +
Sbjct: 427 FGVTIGNGNQCEGSGICKRVKVKLKELTIVADFLAVELGTVDLVLGMQWLDSTGTMKVHW 486
Query: 63 KALTMEFTYRRQPIKLVG 80
+LTM F + + I L G
Sbjct: 487 PSLTMTFWMKGRRIILKG 504
>gi|218200076|gb|EEC82503.1| hypothetical protein OsI_26980 [Oryza sativa Indica Group]
Length = 471
Score = 43.1 bits (100), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 22/81 (27%), Positives = 39/81 (48%)
Query: 3 FLVDVGNGERIRSEGHCSKVKFEMQGVEFEVDFHILDFSGANAGLAVQWLEKLGKIVTDH 62
FLV V NG+ I + + + QG F D ++ G +A L + WL + G + +
Sbjct: 85 FLVKVANGDCIPCQFVVPQFTWWFQGRTFTYDMRVVPLGGHDAILGMDWLAQWGDMSCNW 144
Query: 63 KALTMEFTYRRQPIKLVGAQN 83
T++F Y+ ++L G +
Sbjct: 145 AKKTLKFMYQGTWVELQGVPD 165
>gi|3810596|gb|AAC69378.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
Length = 945
Score = 43.1 bits (100), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 36/78 (46%)
Query: 3 FLVDVGNGERIRSEGHCSKVKFEMQGVEFEVDFHILDFSGANAGLAVQWLEKLGKIVTDH 62
F V V NG + + M GV F V + L G + + VQWL LG + +
Sbjct: 360 FTVRVVNGMPLVCRSRYEAIPVVMGGVVFPVTLYALPLMGLDLAMGVQWLSTLGPTLCNW 419
Query: 63 KALTMEFTYRRQPIKLVG 80
K T++F + ++L+G
Sbjct: 420 KEQTLQFHWAGDEVRLMG 437
>gi|116309424|emb|CAH66499.1| H0321H01.8 [Oryza sativa Indica Group]
Length = 1602
Score = 42.7 bits (99), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 38/86 (44%), Gaps = 3/86 (3%)
Query: 5 VDVGNGERIRSEGHCSKVKFEMQGVEFEVDFHILDFSGANAGLAVQWLEKLGKIVTDHKA 64
V + +G ++ S + MQG +F F +L + L + WLE + D
Sbjct: 466 VRIADGGTMKCTHEISSCNWWMQGNQFCNSFRVLPLGNYDIILGMDWLELFSPMQVDWAN 525
Query: 65 LTMEFTYRRQPIKLVGAQNILPKPTQ 90
MEF Y+ KLV Q ILPK Q
Sbjct: 526 KWMEFLYQG---KLVRLQGILPKSVQ 548
>gi|38345562|emb|CAE03436.2| OSJNBa0032F06.19 [Oryza sativa Japonica Group]
Length = 1575
Score = 42.7 bits (99), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 21/76 (27%), Positives = 37/76 (48%)
Query: 5 VDVGNGERIRSEGHCSKVKFEMQGVEFEVDFHILDFSGANAGLAVQWLEKLGKIVTDHKA 64
V V NG + K+E+QG +F +F +L + L + WLEK + + +A
Sbjct: 540 VKVANGTVLYCTSELPAAKWEVQGHQFSTNFKLLPLDNYDMILGMDWLEKYSPMDINWQA 599
Query: 65 LTMEFTYRRQPIKLVG 80
T++F + ++L G
Sbjct: 600 KTIQFCLHDKSVELKG 615
>gi|297608672|ref|NP_001061948.2| Os08g0451600 [Oryza sativa Japonica Group]
gi|215768264|dbj|BAH00493.1| unnamed protein product [Oryza sativa Japonica Group]
gi|255678494|dbj|BAF23862.2| Os08g0451600 [Oryza sativa Japonica Group]
Length = 707
Score = 42.4 bits (98), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 22/84 (26%), Positives = 40/84 (47%)
Query: 4 LVDVGNGERIRSEGHCSKVKFEMQGVEFEVDFHILDFSGANAGLAVQWLEKLGKIVTDHK 63
LV V NG+ I + + + QG F D ++ G +A L + WL + G + +
Sbjct: 196 LVKVANGDCIHCQFMVPQFTWWFQGRTFTYDMRVVPLGGHDAILGMDWLAQWGDMSCNWA 255
Query: 64 ALTMEFTYRRQPIKLVGAQNILPK 87
T++F Y+ ++L G + P+
Sbjct: 256 NKTLKFMYQGTWVELQGVPDSPPQ 279
>gi|449456255|ref|XP_004145865.1| PREDICTED: enzymatic polyprotein-like [Cucumis sativus]
Length = 818
Score = 42.4 bits (98), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 45/90 (50%), Gaps = 1/90 (1%)
Query: 3 FLVDVGNGERIRSEGHCSKVKFEMQGVEFEVDFHILDFSGANAGLAVQWLEKLGKIVTDH 62
F V +GN + G C +VK +++ + DF ++ + L +QWL+ G +
Sbjct: 407 FGVTIGNDNQCEGSGICKRVKVKLKELTIVADFLAVELGTVDLVLGMQWLDTTGTMKVHW 466
Query: 63 KALTMEFTYRRQPIKLVGAQNILPKPTQSI 92
+LTM F + + I L G +++ KP S+
Sbjct: 467 PSLTMTFWAKDKQIVLRGDPSLV-KPECSL 495
>gi|307136175|gb|ADN34016.1| ty3-gypsy retrotransposon protein [Cucumis melo subsp. melo]
Length = 1185
Score = 42.4 bits (98), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 38/76 (50%)
Query: 5 VDVGNGERIRSEGHCSKVKFEMQGVEFEVDFHILDFSGANAGLAVQWLEKLGKIVTDHKA 64
V +G+G+ ++ +G C+ V + G+ DF L+ + L +QWL K G + D +
Sbjct: 414 VIMGSGKAVQGKGMCTGVVVGLPGLTVVEDFLPLELGHLDMVLGMQWLPKQGAMTVDWRN 473
Query: 65 LTMEFTYRRQPIKLVG 80
L M F R + L G
Sbjct: 474 LAMTFAVRDVKVMLRG 489
>gi|91805527|gb|ABE65492.1| hypothetical protein At3g29750 [Arabidopsis thaliana]
Length = 259
Score = 42.4 bits (98), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 24/93 (25%), Positives = 46/93 (49%), Gaps = 2/93 (2%)
Query: 7 VGNGERIRSEGHCSKVKFEMQGVEFEVDFHILDFSGANAG--LAVQWLEKLGKIVTDHKA 64
+G + I+S G C ++ +Q VE +F +LD + + L +WL KLG+ + + +
Sbjct: 96 LGQRQCIQSVGTCLGIRLWVQEVEITENFLLLDLAKTDVDVILGYEWLSKLGETMVNWQN 155
Query: 65 LTMEFTYRRQPIKLVGAQNILPKPTQSIHLQSR 97
F++ +Q I L L + T + ++S
Sbjct: 156 QDFSFSHNQQWITLCAEHEELEQVTTKVKMKSE 188
>gi|116830535|gb|ABK28225.1| unknown [Arabidopsis thaliana]
Length = 260
Score = 42.4 bits (98), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 24/93 (25%), Positives = 46/93 (49%), Gaps = 2/93 (2%)
Query: 7 VGNGERIRSEGHCSKVKFEMQGVEFEVDFHILDFSGANAG--LAVQWLEKLGKIVTDHKA 64
+G + I+S G C ++ +Q VE +F +LD + + L +WL KLG+ + + +
Sbjct: 96 LGQRQCIQSVGTCLGIRLWVQEVEITENFLLLDLAKTDVDVILGYEWLSKLGETMVNWQN 155
Query: 65 LTMEFTYRRQPIKLVGAQNILPKPTQSIHLQSR 97
F++ +Q I L L + T + ++S
Sbjct: 156 QDFSFSHNQQWITLCAEHEELEQVTTKVKMKSE 188
>gi|90399077|emb|CAJ86299.1| H0124B04.16 [Oryza sativa Indica Group]
Length = 1265
Score = 42.4 bits (98), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 21/76 (27%), Positives = 37/76 (48%)
Query: 5 VDVGNGERIRSEGHCSKVKFEMQGVEFEVDFHILDFSGANAGLAVQWLEKLGKIVTDHKA 64
V V NG + K+E+QG +F +F +L + L + WLEK + + +A
Sbjct: 489 VKVANGTVLYCTSELPAAKWEVQGHQFSTNFKLLPLDNYDMILGMDWLEKYSPMDINWQA 548
Query: 65 LTMEFTYRRQPIKLVG 80
T++F + ++L G
Sbjct: 549 KTIQFCLHDKSVELKG 564
>gi|449470598|ref|XP_004153003.1| PREDICTED: enzymatic polyprotein-like, partial [Cucumis sativus]
Length = 1049
Score = 42.0 bits (97), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 20/83 (24%), Positives = 42/83 (50%)
Query: 3 FLVDVGNGERIRSEGHCSKVKFEMQGVEFEVDFHILDFSGANAGLAVQWLEKLGKIVTDH 62
F V +G+G R + G C++++ +++ + DF ++ + L +QWL G +
Sbjct: 411 FGVTIGDGTRCQGRGVCNRLELKLKEITIVADFLAIELGSVDVILGMQWLNTTGTMKIHW 470
Query: 63 KALTMEFTYRRQPIKLVGAQNIL 85
+LTM F ++ L G +++
Sbjct: 471 PSLTMTFRMGKKQFILKGDPSLI 493
>gi|359372828|gb|AEV42261.1| hypothetical protein [Beta vulgaris]
Length = 1396
Score = 42.0 bits (97), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 32/61 (52%), Gaps = 1/61 (1%)
Query: 3 FLVDVGNGERIRSEGHCSKVKFEMQGVEFEVDFHILDFSGANAGLAVQWLEKLGKIVTDH 62
F V +G G+ +R G C V +QGV E ++ + +QWLEKLG +VT+
Sbjct: 420 FEVSLGTGQEVRGTGECLAVPLMVQGV-MENFLPPPPLGNSDVIMGIQWLEKLGTMVTNW 478
Query: 63 K 63
K
Sbjct: 479 K 479
>gi|21397270|gb|AAM51834.1|AC105730_8 Putative plant disease resistance polyprotein [Oryza sativa
Japonica Group]
gi|108706267|gb|ABF94062.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 624
Score = 42.0 bits (97), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 40/82 (48%)
Query: 2 SFLVDVGNGERIRSEGHCSKVKFEMQGVEFEVDFHILDFSGANAGLAVQWLEKLGKIVTD 61
S LV V NG+ + + + +QG F D ++ G +A L + WLE+ G++
Sbjct: 240 STLVKVANGDCLPCQYVVPGFFWWIQGHTFTYDMRVVTLGGHDAILGMDWLEQWGEMSCH 299
Query: 62 HKALTMEFTYRRQPIKLVGAQN 83
T++F Y+ I L G Q+
Sbjct: 300 WANKTLKFQYQGSWISLQGVQD 321
>gi|449473450|ref|XP_004153884.1| PREDICTED: enzymatic polyprotein-like, partial [Cucumis sativus]
Length = 564
Score = 42.0 bits (97), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 20/83 (24%), Positives = 42/83 (50%)
Query: 3 FLVDVGNGERIRSEGHCSKVKFEMQGVEFEVDFHILDFSGANAGLAVQWLEKLGKIVTDH 62
F V +G+G R + G C++++ +++ + DF ++ + L +QWL G +
Sbjct: 276 FGVTIGDGTRCQGRGVCNRLELKLKEITIVADFLAIELGSVDVILGMQWLNTTGTMKIHW 335
Query: 63 KALTMEFTYRRQPIKLVGAQNIL 85
+LTM F ++ L G +++
Sbjct: 336 PSLTMTFRMGKKQFILKGDPSLI 358
>gi|15230067|ref|NP_189618.1| aspartyl protease-like protein [Arabidopsis thaliana]
gi|332644083|gb|AEE77604.1| aspartyl protease-like protein [Arabidopsis thaliana]
Length = 421
Score = 41.6 bits (96), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 24/92 (26%), Positives = 46/92 (50%), Gaps = 2/92 (2%)
Query: 7 VGNGERIRSEGHCSKVKFEMQGVEFEVDFHILDFSGANAG--LAVQWLEKLGKIVTDHKA 64
+G + I+S G C ++ +Q VE +F +LD + + L +WL KLG+ + + +
Sbjct: 170 LGQRQCIQSVGTCLGIRLWVQEVEITENFLLLDLAKTDVDVILGYEWLSKLGETMVNWQN 229
Query: 65 LTMEFTYRRQPIKLVGAQNILPKPTQSIHLQS 96
F++ +Q I L L + T + ++S
Sbjct: 230 QDFSFSHNQQWITLCAEHEELEQVTTKVKMKS 261
>gi|147854459|emb|CAN78588.1| hypothetical protein VITISV_043911 [Vitis vinifera]
Length = 2232
Score = 41.6 bits (96), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 38/79 (48%)
Query: 2 SFLVDVGNGERIRSEGHCSKVKFEMQGVEFEVDFHILDFSGANAGLAVQWLEKLGKIVTD 61
S+ V +G G ++ +G C V MQG+ DF L+ + L + WL LG + +
Sbjct: 1100 SYGVMMGTGISVKGKGICRGVCISMQGLTVVEDFLPLELGNTDVILGMPWLGTLGDVKVN 1159
Query: 62 HKALTMEFTYRRQPIKLVG 80
K LTM+ + + L G
Sbjct: 1160 WKMLTMKIKMGKAVMVLKG 1178
>gi|323134589|gb|ADX31265.1| unknown [Triticum aestivum]
Length = 1231
Score = 41.6 bits (96), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 22/81 (27%), Positives = 37/81 (45%)
Query: 5 VDVGNGERIRSEGHCSKVKFEMQGVEFEVDFHILDFSGANAGLAVQWLEKLGKIVTDHKA 64
V + +G + G + +++ QG EF D +L + + + WLE G + D A
Sbjct: 503 VKIADGGTLSCSGVVPECRWKTQGHEFVTDLRVLALGCYDMIVGMDWLESCGPMWIDWSA 562
Query: 65 LTMEFTYRRQPIKLVGAQNIL 85
+ F + Q I+L G Q L
Sbjct: 563 KQLIFNHGGQQIQLAGVQTQL 583
>gi|18921319|gb|AAL82524.1|AC084766_10 putative polyprotein [Oryza sativa Japonica Group]
gi|108708440|gb|ABF96235.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 896
Score = 41.6 bits (96), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 21/76 (27%), Positives = 36/76 (47%)
Query: 7 VGNGERIRSEGHCSKVKFEMQGVEFEVDFHILDFSGANAGLAVQWLEKLGKIVTDHKALT 66
V NG+ + + + +QG F D ++ G +A L + WL + G + + T
Sbjct: 388 VANGDFLSCQYVVPNFTWWIQGQTFSYDLKVVQLGGHDAILGMDWLAQWGDMSCNWATKT 447
Query: 67 MEFTYRRQPIKLVGAQ 82
++F Y+ Q I L G Q
Sbjct: 448 LKFFYQDQWIALQGVQ 463
>gi|218199564|gb|EEC81991.1| hypothetical protein OsI_25921 [Oryza sativa Indica Group]
Length = 426
Score = 41.6 bits (96), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 41/93 (44%), Gaps = 2/93 (2%)
Query: 5 VDVGNGERIRSEGHCSKVKFEMQGVEFEVDFHILDFSGANAGLAVQWLEKLGKIVTDHKA 64
V + +G +I + +++ QG F D +L + L ++WLE + D K
Sbjct: 275 VTIADGGKILCNQVVANLEWWCQGHTFSTDLKVLSLGSYDMILGMEWLEDFSPMWIDWKR 334
Query: 65 LTMEFTYRRQPIKLVGAQNILP--KPTQSIHLQ 95
M FTY I LVG + L KP + L+
Sbjct: 335 KKMTFTYAGNRITLVGVKEQLDQCKPVTAKQLK 367
>gi|440577319|emb|CCI55326.1| PH01B001I13.22 [Phyllostachys edulis]
Length = 1426
Score = 41.2 bits (95), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 33/82 (40%)
Query: 5 VDVGNGERIRSEGHCSKVKFEMQGVEFEVDFHILDFSGANAGLAVQWLEKLGKIVTDHKA 64
V V NG +I G C + F +D + G + L VQWL LG I D
Sbjct: 1317 VAVANGNKITCGGVCYTTPISIDHEHFVLDLLTIPLGGFDIVLGVQWLRSLGPITWDFSN 1376
Query: 65 LTMEFTYRRQPIKLVGAQNILP 86
LTM + + + G + P
Sbjct: 1377 LTMRLHRQDRTVTWHGVAPVQP 1398
>gi|116309032|emb|CAH66146.1| OSIGBa0114M03.4 [Oryza sativa Indica Group]
Length = 1448
Score = 41.2 bits (95), Expect = 0.085, Method: Composition-based stats.
Identities = 23/76 (30%), Positives = 33/76 (43%)
Query: 7 VGNGERIRSEGHCSKVKFEMQGVEFEVDFHILDFSGANAGLAVQWLEKLGKIVTDHKALT 66
V NGER+ G + G F D ++ +G + L +WL LG IV D
Sbjct: 385 VANGERVTCIGVIRGAPLTIGGNSFPADLFVMPLAGYDVVLGTRWLGALGPIVWDLATRK 444
Query: 67 MEFTYRRQPIKLVGAQ 82
M F +R + I G +
Sbjct: 445 MTFQHRGRAICWSGVE 460
>gi|449479937|ref|XP_004155752.1| PREDICTED: uncharacterized protein LOC101232675 [Cucumis sativus]
Length = 436
Score = 40.8 bits (94), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 35/66 (53%)
Query: 3 FLVDVGNGERIRSEGHCSKVKFEMQGVEFEVDFHILDFSGANAGLAVQWLEKLGKIVTDH 62
F V VG+G R + +G C KV+ ++ + DF +++ + L +QWL+ G + T
Sbjct: 206 FGVTVGDGTRCKGKGICRKVEPRLKEMTVITDFLVVELGNIDVVLGMQWLDTTGTMKTLE 265
Query: 63 KALTME 68
K +E
Sbjct: 266 KTWDIE 271
>gi|38346427|emb|CAD40214.2| OSJNBa0019J05.12 [Oryza sativa Japonica Group]
Length = 1817
Score = 40.8 bits (94), Expect = 0.100, Method: Compositional matrix adjust.
Identities = 20/76 (26%), Positives = 37/76 (48%)
Query: 5 VDVGNGERIRSEGHCSKVKFEMQGVEFEVDFHILDFSGANAGLAVQWLEKLGKIVTDHKA 64
V + +GE + + ++ MQG F +F +L+ G + L + WLE+ + +
Sbjct: 641 VKLADGETLSCSYEVTNCRWWMQGHNFINNFRLLNLGGYDIILGMDWLEQFSPMQVNWVD 700
Query: 65 LTMEFTYRRQPIKLVG 80
M+ T QP++L G
Sbjct: 701 KWMDITISGQPVRLQG 716
>gi|449511951|ref|XP_004164098.1| PREDICTED: uncharacterized protein LOC101232566 [Cucumis sativus]
Length = 707
Score = 40.8 bits (94), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 43/81 (53%), Gaps = 4/81 (4%)
Query: 2 SFLVDVGNGERIRSEGHCSKVKFEMQGVEFEV--DFHILDFSGANAGLAVQWLEKLGKIV 59
++ V +G+G I+ +G C + EM E+ V DF L+ G +A L +QWL LG
Sbjct: 452 NYGVILGSGTAIKGKGVCEAI--EMMIGEWRVIDDFLPLELGGVDAILGMQWLYSLGITE 509
Query: 60 TDHKALTMEFTYRRQPIKLVG 80
D K L + FT+ + + + G
Sbjct: 510 VDWKNLILTFTHHGEKVVIRG 530
>gi|77551695|gb|ABA94492.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 306
Score = 40.4 bits (93), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 30/61 (49%), Gaps = 2/61 (3%)
Query: 5 VDVGNGERIRSEGHCSKVKFEMQGVEFEVDFHILDFSGANAGLAVQW--LEKLGKIVTDH 62
V V NG+RI S G C + + G F VD LD + L +W L+ LG ++ D
Sbjct: 229 VVVANGDRIVSPGRCHNLPLLIDGEIFRVDCFALDLCAVDIILGTEWLQLQTLGPVLWDF 288
Query: 63 K 63
K
Sbjct: 289 K 289
>gi|18425247|gb|AAL69425.1|AC098565_7 Putative polyprotein [Oryza sativa]
gi|31430198|gb|AAP52144.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 848
Score = 40.4 bits (93), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 30/65 (46%)
Query: 5 VDVGNGERIRSEGHCSKVKFEMQGVEFEVDFHILDFSGANAGLAVQWLEKLGKIVTDHKA 64
V V NG+RI S G + + F +DF+ L G + L QWL LG + D
Sbjct: 394 VAVANGDRITSPGCFPSQRVTIGDHTFVIDFYALPLGGYDVVLGAQWLGSLGPTLWDFAK 453
Query: 65 LTMEF 69
++ F
Sbjct: 454 QSLAF 458
>gi|147855151|emb|CAN81740.1| hypothetical protein VITISV_009674 [Vitis vinifera]
Length = 771
Score = 40.4 bits (93), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 39/82 (47%), Gaps = 4/82 (4%)
Query: 2 SFLVDVGNGERIRSEGHCSKVKFEMQGVEFEVDFHILDFSGANAGLAVQWLEKLG----K 57
+F+V V NGE +R +G +V+ ++QG F + + L G + L L +
Sbjct: 140 TFIVRVSNGEHLRCQGQFEEVQVDLQGTSFSLTLYSLPLIGLDVVLGFNGSSYLALWNWR 199
Query: 58 IVTDHKALTMEFTYRRQPIKLV 79
TD++AL + + PI V
Sbjct: 200 FCTDYRALNVATIKYQFPISTV 221
>gi|387169525|gb|AFJ66186.1| hypothetical protein 11M19.5 [Arabidopsis halleri]
Length = 1557
Score = 40.0 bits (92), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 34/81 (41%), Gaps = 7/81 (8%)
Query: 5 VDVGNGERIRSEGHCSKVKFEMQGVEFEVDFHILDFSGANAGLAVQWLEKLGKIVTDHKA 64
VD G + + + MQG F + L + L VQWL LG I+ D
Sbjct: 517 VDAALGGKTVTLFRSKDFTWRMQGYSFTTEVRTLPLDHWDIVLGVQWLATLGPILWDFTY 576
Query: 65 LTMEFTYRRQPIKLVGAQNIL 85
L MEFT L GA+ IL
Sbjct: 577 LRMEFT-------LNGAKYIL 590
>gi|449526146|ref|XP_004170075.1| PREDICTED: uncharacterized protein LOC101232562, partial [Cucumis
sativus]
Length = 497
Score = 40.0 bits (92), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 42/81 (51%), Gaps = 4/81 (4%)
Query: 2 SFLVDVGNGERIRSEGHCSKVKFEMQGVEFEV--DFHILDFSGANAGLAVQWLEKLGKIV 59
+F V +G+G I+ +G C + EM E+ V DF L+ +A L +QWL LG
Sbjct: 102 NFGVILGSGTAIKGKGVCEAI--EMIIGEWRVIDDFLPLELGSVDAILGMQWLYSLGITE 159
Query: 60 TDHKALTMEFTYRRQPIKLVG 80
D K L + FT+ + I + G
Sbjct: 160 VDWKNLILTFTHHGEKIVIRG 180
>gi|449479800|ref|XP_004155711.1| PREDICTED: uncharacterized protein LOC101230021 [Cucumis sativus]
Length = 1480
Score = 39.7 bits (91), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 38/70 (54%), Gaps = 4/70 (5%)
Query: 2 SFLVDVGNGERIRSEGHCSKVKFEMQGVEFEV--DFHILDFSGANAGLAVQWLEKLGKIV 59
++ V +G+G I+ +G C + EM E+ V DF +L+ G +A L +QWL LG
Sbjct: 1261 NYGVILGSGTAIKGKGVCEAI--EMMIGEWRVIDDFLLLELGGVDAILGMQWLYSLGITE 1318
Query: 60 TDHKALTMEF 69
D K L + F
Sbjct: 1319 VDWKNLILTF 1328
>gi|10122034|gb|AAG13423.1|AC051634_4 putative plant disease resistance polyprotein [Oryza sativa
Japonica Group]
Length = 894
Score = 39.7 bits (91), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 39/82 (47%)
Query: 2 SFLVDVGNGERIRSEGHCSKVKFEMQGVEFEVDFHILDFSGANAGLAVQWLEKLGKIVTD 61
S LV V NG+ + + + +QG F D ++ +A L + WLE+ G++
Sbjct: 434 STLVKVANGDCLPCQYVVPGFSWWIQGHTFTYDMRVVTLGVHDAILGMDWLEQWGEMSCH 493
Query: 62 HKALTMEFTYRRQPIKLVGAQN 83
T++F Y+ I L G Q+
Sbjct: 494 WANKTLKFQYQGSWISLQGVQD 515
>gi|108862189|gb|ABA96448.2| retrotransposon protein, putative, unclassified, expressed [Oryza
sativa Japonica Group]
gi|215767578|dbj|BAG99806.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 649
Score = 39.7 bits (91), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 22/88 (25%), Positives = 40/88 (45%), Gaps = 3/88 (3%)
Query: 3 FLVDVGNGERIRSEGHCSKVKFEMQGVEFEVDFHILDFSGANAGLAVQWLEKLGKIVTDH 62
+V + +G + + K+ MQG +F +F +L + L + WLE + + D
Sbjct: 34 LIVRIADGGTMSCTHEITNCKWWMQGYQFCNNFRMLPLGNYDIILGMDWLESISPMQVDW 93
Query: 63 KALTMEFTYRRQPIKLVGAQNILPKPTQ 90
MEF ++ I++ Q +L P Q
Sbjct: 94 ANKWMEFNHQGASIRV---QGLLSTPVQ 118
>gi|77551190|gb|ABA93987.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 1485
Score = 39.7 bits (91), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 20/70 (28%), Positives = 33/70 (47%)
Query: 1 MSFLVDVGNGERIRSEGHCSKVKFEMQGVEFEVDFHILDFSGANAGLAVQWLEKLGKIVT 60
+SF V V NG+ + E + V + +QG F +L + L + WLE+ +
Sbjct: 511 VSFQVKVANGQMLSCETELANVSWSVQGHHFCSALKVLPLQSYDMILGMDWLERYSPMDI 570
Query: 61 DHKALTMEFT 70
D + T+ FT
Sbjct: 571 DWQQKTIRFT 580
>gi|147767990|emb|CAN67159.1| hypothetical protein VITISV_039497 [Vitis vinifera]
Length = 711
Score = 39.3 bits (90), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 34/79 (43%), Gaps = 20/79 (25%)
Query: 3 FLVDVGNGERIRSEGHCSKVKFEMQGVEFEVDFHILDFSGANAGLAVQWLEKLGKIVTDH 62
F V V NG ++ +G V +QGV QWLE+LG +V +
Sbjct: 237 FTVKVANGTPLKCQGRFEHVHVILQGV--------------------QWLEQLGIVVCNW 276
Query: 63 KALTMEFTYRRQPIKLVGA 81
K LTM F + Q KL G
Sbjct: 277 KKLTMVFQWENQTHKLQGT 295
>gi|108706366|gb|ABF94161.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 1217
Score = 39.3 bits (90), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 20/77 (25%), Positives = 39/77 (50%)
Query: 7 VGNGERIRSEGHCSKVKFEMQGVEFEVDFHILDFSGANAGLAVQWLEKLGKIVTDHKALT 66
+ +G ++ E + +QG ++ +F +L SG +A L + WL LG + D +
Sbjct: 624 IADGGLLQCEKQLPDCAWWLQGRCYKSNFKLLPLSGYDAILGMDWLVGLGVMKIDWEQKW 683
Query: 67 MEFTYRRQPIKLVGAQN 83
+E+ P+K+ G Q+
Sbjct: 684 LEYLDNGFPVKIQGVQS 700
>gi|147781636|emb|CAN75959.1| hypothetical protein VITISV_003125 [Vitis vinifera]
Length = 462
Score = 38.9 bits (89), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 34/61 (55%), Gaps = 1/61 (1%)
Query: 29 VEFEVDFHILDFSGANAGLAVQWLEKLGKIVTDHKALTMEFTYRRQPIKLVGAQNILPKP 88
+ F + + L +G + L +QWLE+LG ++ + + +TMEF + Q V ++ P P
Sbjct: 10 IPFVLTLYSLPLTGLDLVLGIQWLEQLGLVMCNWQKMTMEFQWEDQECT-VTIKDGFPIP 68
Query: 89 T 89
T
Sbjct: 69 T 69
>gi|449530792|ref|XP_004172376.1| PREDICTED: uncharacterized protein LOC101223371 [Cucumis sativus]
Length = 943
Score = 38.5 bits (88), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 22/79 (27%), Positives = 39/79 (49%)
Query: 2 SFLVDVGNGERIRSEGHCSKVKFEMQGVEFEVDFHILDFSGANAGLAVQWLEKLGKIVTD 61
++ V +G+G I+ + C ++ + DF L+ G +A L +QWL LG D
Sbjct: 443 NYGVILGSGTAIKGKRVCEAIEMVLGKWRVVDDFLPLELGGVDAILGMQWLYSLGITEVD 502
Query: 62 HKALTMEFTYRRQPIKLVG 80
K L + FT+ + + + G
Sbjct: 503 WKNLILTFTHDEEKVVMRG 521
>gi|242085372|ref|XP_002443111.1| hypothetical protein SORBIDRAFT_08g008675 [Sorghum bicolor]
gi|241943804|gb|EES16949.1| hypothetical protein SORBIDRAFT_08g008675 [Sorghum bicolor]
Length = 1456
Score = 38.5 bits (88), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 21/96 (21%), Positives = 42/96 (43%), Gaps = 5/96 (5%)
Query: 7 VGNGERIRSEGHCSKVKFEMQGVEFEVDFHILDFSGANAGLAVQWLEKLGKIVTDHKALT 66
V NGE++ G + F VD ++ +G + L QW+ LG++V D +
Sbjct: 397 VANGEKVPCPGVIKHAPIAIHDSVFAVDLFVMPLAGHDLVLGTQWMATLGRLVWDFIDGS 456
Query: 67 MEFTYRRQPIKLVGAQNILPKPTQSIHLQSRIFTSP 102
+ F ++ ++ G PT ++ + ++P
Sbjct: 457 VSFQHQGSTVRWPGV-----APTSTLETCATTSSAP 487
>gi|242033109|ref|XP_002463949.1| hypothetical protein SORBIDRAFT_01g009436 [Sorghum bicolor]
gi|241917803|gb|EER90947.1| hypothetical protein SORBIDRAFT_01g009436 [Sorghum bicolor]
Length = 1450
Score = 38.1 bits (87), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 16/55 (29%), Positives = 26/55 (47%)
Query: 7 VGNGERIRSEGHCSKVKFEMQGVEFEVDFHILDFSGANAGLAVQWLEKLGKIVTD 61
V NGE++ G + F VD ++ +G + L QW+ LG++V D
Sbjct: 456 VANGEKVPCPGVIKNAPLAIHDSVFAVDLFVMPLAGHDLVLGTQWMATLGRLVWD 510
>gi|62733754|gb|AAX95863.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 1126
Score = 38.1 bits (87), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 21/81 (25%), Positives = 37/81 (45%)
Query: 5 VDVGNGERIRSEGHCSKVKFEMQGVEFEVDFHILDFSGANAGLAVQWLEKLGKIVTDHKA 64
V + +G ++ +KV + QG F D +L G + L + WLE + + +
Sbjct: 487 VVIADGGVLQCNKVATKVDWWCQGHSFTSDLKVLQLGGYDVILGMDWLEHFSPMWINWQR 546
Query: 65 LTMEFTYRRQPIKLVGAQNIL 85
+ FTY+ + I L G + L
Sbjct: 547 KKLRFTYQGKRITLTGVKENL 567
>gi|242077302|ref|XP_002448587.1| hypothetical protein SORBIDRAFT_06g029685 [Sorghum bicolor]
gi|241939770|gb|EES12915.1| hypothetical protein SORBIDRAFT_06g029685 [Sorghum bicolor]
Length = 797
Score = 37.4 bits (85), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 21/96 (21%), Positives = 42/96 (43%), Gaps = 5/96 (5%)
Query: 7 VGNGERIRSEGHCSKVKFEMQGVEFEVDFHILDFSGANAGLAVQWLEKLGKIVTDHKALT 66
V NGE++ G + F VD ++ +G + L QW+ LG++V D +
Sbjct: 456 VANGEKVPCLGVIKHAPIAIHDSVFAVDLFVMPLAGHDLVLGTQWMATLGRLVWDFVDGS 515
Query: 67 MEFTYRRQPIKLVGAQNILPKPTQSIHLQSRIFTSP 102
+ F ++ ++ G PT ++ + ++P
Sbjct: 516 VTFQHQGSTVRWPGV-----APTSTLETCATTSSAP 546
>gi|34015139|gb|AAQ56336.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 674
Score = 37.0 bits (84), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 20/76 (26%), Positives = 35/76 (46%)
Query: 5 VDVGNGERIRSEGHCSKVKFEMQGVEFEVDFHILDFSGANAGLAVQWLEKLGKIVTDHKA 64
V V NG ++ E K+E+QG F F +L + + L + WLE+ + D +
Sbjct: 402 VRVANGSILQCESELPNAKWEVQGNTFHTTFKVLPLNNYDVILGMDWLEQHSPMDIDWQK 461
Query: 65 LTMEFTYRRQPIKLVG 80
T+ ++L+G
Sbjct: 462 KTLSLQGNGGLVQLLG 477
>gi|38345213|emb|CAD40196.2| OSJNBb0043H09.2 [Oryza sativa Japonica Group]
Length = 1409
Score = 37.0 bits (84), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 22/98 (22%), Positives = 43/98 (43%), Gaps = 3/98 (3%)
Query: 5 VDVGNGERIRSEGHCSKVKFEMQGVEFEVDFHILDFSGANAGLAVQWLEKLGKIVTDHKA 64
V + +G ++ K + +QG F DF +L +A L + WL++ + +
Sbjct: 476 VQIADGGQLSCSQVIPKCDWWIQGHNFSSDFRLLPLGSYDAILGMDWLQQFSPMQIEWNH 535
Query: 65 LTMEFTYRRQPIKLVGAQNILPKPTQSIHLQSRIFTSP 102
+EF++ + +KL Q I P+ +Q + P
Sbjct: 536 KWLEFSHLGKVVKL---QGITPQTSQCATISGEQLQEP 570
>gi|240254260|ref|NP_683428.4| aminoacyl-tRNA synthetase, class II-like domain containing protein
[Arabidopsis thaliana]
gi|332194863|gb|AEE32984.1| aminoacyl-tRNA synthetase, class II-like domain containing protein
[Arabidopsis thaliana]
Length = 131
Score = 37.0 bits (84), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 26/113 (23%), Positives = 49/113 (43%), Gaps = 17/113 (15%)
Query: 7 VGNGERIRSEGHCSKVKFEMQGVEFEVDFHILDFSGANAG--LAVQWLEKLGK------- 57
+G+G+ I S+G C + +Q D+ +LD + +A L +WL KLG+
Sbjct: 1 MGHGQHIESKGSCLGISLWIQEAAIVEDYLLLDLNKTDADVILGYKWLSKLGETMIENTK 60
Query: 58 --------IVTDHKALTMEFTYRRQPIKLVGAQNILPKPTQSIHLQSRIFTSP 102
I ++KA T + T R + +G + + +I + ++ S
Sbjct: 61 TFYNDTSWITINNKADTSDGTKRGGRLDFMGKTTVAKEDRSNIGMHIKLVQSS 113
>gi|57834110|emb|CAE04775.3| OSJNBa0079C19.16 [Oryza sativa Japonica Group]
Length = 1002
Score = 37.0 bits (84), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 22/98 (22%), Positives = 43/98 (43%), Gaps = 3/98 (3%)
Query: 5 VDVGNGERIRSEGHCSKVKFEMQGVEFEVDFHILDFSGANAGLAVQWLEKLGKIVTDHKA 64
V + +G ++ K + +QG F DF +L +A L + WL++ + +
Sbjct: 791 VQIADGGQLSCSQVIPKCDWWIQGHNFSSDFRLLPLGSYDAILGMDWLQQFSPMQIEWNH 850
Query: 65 LTMEFTYRRQPIKLVGAQNILPKPTQSIHLQSRIFTSP 102
+EF++ + +KL Q I P+ +Q + P
Sbjct: 851 KWLEFSHLGKVVKL---QGITPQTSQCATISGEQLQEP 885
>gi|108862596|gb|ABA97714.2| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 1287
Score = 37.0 bits (84), Expect = 1.6, Method: Composition-based stats.
Identities = 20/63 (31%), Positives = 26/63 (41%)
Query: 7 VGNGERIRSEGHCSKVKFEMQGVEFEVDFHILDFSGANAGLAVQWLEKLGKIVTDHKALT 66
V NGER+ G + G F D ++ G + L WL LG IV D +
Sbjct: 349 VANGERVTCAGVLKAAPLTIDGALFPADLFVMPLVGFDVVLGTCWLGTLGPIVWDLASHR 408
Query: 67 MEF 69
M F
Sbjct: 409 MSF 411
>gi|62733129|gb|AAX95246.1| retrotransposon protein, putative, Ty3-gypsy sub-class [Oryza
sativa Japonica Group]
gi|77550683|gb|ABA93480.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1311
Score = 36.6 bits (83), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 34/61 (55%), Gaps = 3/61 (4%)
Query: 10 GERIRSEGHCSKVKFEMQGVEFEVDFHILDFSGANAGLAVQWLEKLGKIVTD--HKALTM 67
G +R++ C +VK E++GVEF + +LD + L + WL K V D +++T+
Sbjct: 316 GSEMRTQTGCPRVKIEIEGVEFFANLIMLDTPQLDVILGMDWLHS-SKAVLDCGSRSITL 374
Query: 68 E 68
E
Sbjct: 375 E 375
>gi|357130210|ref|XP_003566743.1| PREDICTED: uncharacterized protein LOC100838891 [Brachypodium
distachyon]
Length = 635
Score = 36.6 bits (83), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 18/65 (27%), Positives = 28/65 (43%)
Query: 5 VDVGNGERIRSEGHCSKVKFEMQGVEFEVDFHILDFSGANAGLAVQWLEKLGKIVTDHKA 64
V + NG+ + G + F VD + + G + L WL+ LG I+ D +
Sbjct: 241 VTIANGDHVTCSGLLRHTAIAIGQESFVVDLYAIPLGGFDVVLGTHWLKTLGPILWDFER 300
Query: 65 LTMEF 69
L M F
Sbjct: 301 LYMSF 305
>gi|307136196|gb|ADN34034.1| gypsy/ty3 element polyprotein [Cucumis melo subsp. melo]
Length = 473
Score = 36.6 bits (83), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 19/68 (27%), Positives = 34/68 (50%)
Query: 2 SFLVDVGNGERIRSEGHCSKVKFEMQGVEFEVDFHILDFSGANAGLAVQWLEKLGKIVTD 61
++ V +G+ + ++ C + + + DF L+ + L +QWL+K G + D
Sbjct: 400 NYGVIMGSEKAVQGREMCKGITVGLPVITIVEDFLPLELGNLDMVLGMQWLQKQGAMTVD 459
Query: 62 HKALTMEF 69
KALTM F
Sbjct: 460 WKALTMNF 467
>gi|338808432|gb|AEJ07934.1| Xilon1 gag-pol polyprotein [Zea mays subsp. mexicana]
Length = 1604
Score = 36.2 bits (82), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 15/54 (27%), Positives = 29/54 (53%)
Query: 10 GERIRSEGHCSKVKFEMQGVEFEVDFHILDFSGANAGLAVQWLEKLGKIVTDHK 63
G RIR++ C V E++G+ F + ++ G + L + WL+K +++ K
Sbjct: 544 GGRIRADSICLNVSVEIRGIAFPANLIVMGTQGIDVILGMNWLDKYQAVISCDK 597
>gi|449470397|ref|XP_004152903.1| PREDICTED: uncharacterized protein LOC101208187 [Cucumis sativus]
Length = 1969
Score = 36.2 bits (82), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 21/79 (26%), Positives = 35/79 (44%)
Query: 2 SFLVDVGNGERIRSEGHCSKVKFEMQGVEFEVDFHILDFSGANAGLAVQWLEKLGKIVTD 61
S+ + +G+G+ ++ +G C + + DF L+ + L + WL K G + D
Sbjct: 947 SYGIIMGSGKAVQGKGMCKGATVGLPVLTIVEDFLPLELGNLDMVLGMMWLRKQGAMTVD 1006
Query: 62 HKALTMEFTYRRQPIKLVG 80
K L M F I L G
Sbjct: 1007 WKELAMTFVVGDSKIVLKG 1025
>gi|224133300|ref|XP_002321533.1| predicted protein [Populus trichocarpa]
gi|222868529|gb|EEF05660.1| predicted protein [Populus trichocarpa]
Length = 224
Score = 36.2 bits (82), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 29/55 (52%)
Query: 5 VDVGNGERIRSEGHCSKVKFEMQGVEFEVDFHILDFSGANAGLAVQWLEKLGKIV 59
V V + I SEG + KF++Q F +L G + L +QWL++LG I+
Sbjct: 170 VKVVDDTEINSEGEYADFKFKIQRNHFVSQAIVLPLGGYDVVLGIQWLQELGSIL 224
>gi|334183277|ref|NP_001185213.1| aminoacyl-tRNA synthetase, class II-like domain containing protein
[Arabidopsis thaliana]
gi|332194864|gb|AEE32985.1| aminoacyl-tRNA synthetase, class II-like domain containing protein
[Arabidopsis thaliana]
Length = 154
Score = 35.8 bits (81), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 25/108 (23%), Positives = 48/108 (44%), Gaps = 17/108 (15%)
Query: 7 VGNGERIRSEGHCSKVKFEMQGVEFEVDFHILDFSGANAG--LAVQWLEKLGK------- 57
+G+G+ I S+G C + +Q D+ +LD + +A L +WL KLG+
Sbjct: 1 MGHGQHIESKGSCLGISLWIQEAAIVEDYLLLDLNKTDADVILGYKWLSKLGETMIENTK 60
Query: 58 --------IVTDHKALTMEFTYRRQPIKLVGAQNILPKPTQSIHLQSR 97
I ++KA T + T R + +G + + +I ++ +
Sbjct: 61 TFYNDTSWITINNKADTSDGTKRGGRLDFMGKTTVAKEDRSNIGMRHK 108
>gi|10140673|gb|AAG13508.1|AC068924_13 putative gag-pol polyprotein [Oryza sativa Japonica Group]
Length = 1608
Score = 35.4 bits (80), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 19/76 (25%), Positives = 33/76 (43%)
Query: 5 VDVGNGERIRSEGHCSKVKFEMQGVEFEVDFHILDFSGANAGLAVQWLEKLGKIVTDHKA 64
V V +G ++ + + QG F DF +L +A L + WLE+ + D
Sbjct: 483 VQVADGSQLFCDSFLPNCSWWSQGHSFTSDFRLLPLGSYDAILGMDWLEQFSPMQVDWVH 542
Query: 65 LTMEFTYRRQPIKLVG 80
+ F + Q ++L G
Sbjct: 543 KWIAFQHHGQAVQLQG 558
>gi|449445212|ref|XP_004140367.1| PREDICTED: uncharacterized protein LOC101210426 [Cucumis sativus]
Length = 497
Score = 34.7 bits (78), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 20/82 (24%), Positives = 37/82 (45%)
Query: 3 FLVDVGNGERIRSEGHCSKVKFEMQGVEFEVDFHILDFSGANAGLAVQWLEKLGKIVTDH 62
F V +G+G + +G C +V+ ++ ++ DF + + L +QWL G +
Sbjct: 198 FGVTIGDGTALEGKGVCKRVEVKLPELKIVADFLAIKLGRIDVVLGMQWLSTTGFMGVHW 257
Query: 63 KALTMEFTYRRQPIKLVGAQNI 84
+TM F + L G +I
Sbjct: 258 PTMTMTFMAGTTQVILKGDPSI 279
>gi|91805353|gb|ABE65406.1| hypothetical protein At1g53705 [Arabidopsis thaliana]
Length = 84
Score = 34.7 bits (78), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 17/58 (29%), Positives = 32/58 (55%), Gaps = 2/58 (3%)
Query: 7 VGNGERIRSEGHCSKVKFEMQGVEFEVDFHILDFSGANAG--LAVQWLEKLGKIVTDH 62
+G+G+ I S+G C + +Q D+ +LD + +A L +WL KLG+ + ++
Sbjct: 1 MGHGQHIESKGSCLGISLWIQEAAIVEDYLLLDLNKTDADVILGYKWLSKLGETMIEN 58
>gi|5080762|gb|AAD39272.1|AC007203_4 Similar to retrotransposon polyprotein [Arabidopsis thaliana]
Length = 1264
Score = 34.3 bits (77), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 33/62 (53%), Gaps = 2/62 (3%)
Query: 5 VDVGNGERIRSEGHCSKVKFEMQGVEFEVDFHILDFSGANAGLAVQWLEKLG--KIVTDH 62
V +GNG + G C V F + GVEF +F L+ + L V+WLE L K+V H
Sbjct: 267 VMLGNGVSVHCSGVCKGVLFWLGGVEFGGNFMSLELGVVDVVLGVEWLETLAVPKLVEIH 326
Query: 63 KA 64
++
Sbjct: 327 ES 328
>gi|222629798|gb|EEE61930.1| hypothetical protein OsJ_16672 [Oryza sativa Japonica Group]
Length = 348
Score = 34.3 bits (77), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 18/65 (27%), Positives = 30/65 (46%), Gaps = 2/65 (3%)
Query: 5 VDVGNGERIRSEGHCSKVKFEMQGVEFEVDFHILDFSGANAGLAVQWLEKLGKIVTD--H 62
V V NGE + + HC + + +Q EF F +L+ G + W+ + + +
Sbjct: 205 VKVANGEILYTRAHCPQHAYHIQEEEFASTFRVLEIRGYDIIFGCDWIHQFSPVSLNLKT 264
Query: 63 KALTM 67
K LTM
Sbjct: 265 KELTM 269
>gi|116830377|gb|ABK28146.1| unknown [Arabidopsis thaliana]
Length = 85
Score = 34.3 bits (77), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 17/58 (29%), Positives = 32/58 (55%), Gaps = 2/58 (3%)
Query: 7 VGNGERIRSEGHCSKVKFEMQGVEFEVDFHILDFSGANAG--LAVQWLEKLGKIVTDH 62
+G+G+ I S+G C + +Q D+ +LD + +A L +WL KLG+ + ++
Sbjct: 1 MGHGQHIESKGSCLGISLWIQEAAIVEDYLLLDLNKTDADVILGYKWLSKLGETMIEN 58
>gi|449479939|ref|XP_004155753.1| PREDICTED: enzymatic polyprotein-like [Cucumis sativus]
Length = 426
Score = 34.3 bits (77), Expect = 10.0, Method: Compositional matrix adjust.
Identities = 20/82 (24%), Positives = 37/82 (45%)
Query: 3 FLVDVGNGERIRSEGHCSKVKFEMQGVEFEVDFHILDFSGANAGLAVQWLEKLGKIVTDH 62
F V +G+G + +G C +V+ ++ ++ DF + + L +QWL G +
Sbjct: 121 FGVTIGDGTALEGKGVCKRVEVKLPELKIVADFLAIKLGRIDVVLGMQWLCTTGFMGVHW 180
Query: 63 KALTMEFTYRRQPIKLVGAQNI 84
+TM F + L G +I
Sbjct: 181 PTMTMTFMAGTTQVILKGDPSI 202
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.322 0.137 0.405
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,559,468,099
Number of Sequences: 23463169
Number of extensions: 55458000
Number of successful extensions: 100227
Number of sequences better than 100.0: 161
Number of HSP's better than 100.0 without gapping: 149
Number of HSP's successfully gapped in prelim test: 12
Number of HSP's that attempted gapping in prelim test: 100070
Number of HSP's gapped (non-prelim): 162
length of query: 102
length of database: 8,064,228,071
effective HSP length: 71
effective length of query: 31
effective length of database: 6,398,343,072
effective search space: 198348635232
effective search space used: 198348635232
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 69 (31.2 bits)