Query 039663
Match_columns 102
No_of_seqs 107 out of 260
Neff 5.9
Searched_HMMs 29240
Date Mon Mar 25 20:42:43 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/039663.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/039663hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3s8i_A Protein DDI1 homolog 1; 99.5 1.1E-13 3.8E-18 97.0 6.9 76 6-82 70-145 (148)
2 2i1a_A DNA damage-inducible pr 99.1 2.2E-10 7.7E-15 78.4 8.0 63 15-81 81-143 (148)
3 3slz_A GAG-Pro-POL polyprotein 96.7 0.0033 1.1E-07 43.2 5.8 57 2-62 58-114 (132)
4 1fmb_A EIAV protease; hydrolas 94.6 0.064 2.2E-06 35.1 5.0 52 6-62 53-104 (104)
5 3ec0_A Protease; HIV-2, inhibi 94.1 0.34 1.2E-05 31.6 7.6 55 4-62 45-99 (99)
6 2hs1_A HIV-1 protease; ultra-h 92.2 0.75 2.6E-05 29.8 7.0 54 5-62 46-99 (99)
7 2hah_A Protease, retropepsin; 80.7 3.6 0.00012 27.2 5.2 51 6-57 56-112 (116)
8 3ka2_A [L-Ala51;Gly51']HIV-1 p 76.0 10 0.00036 27.4 6.9 54 6-63 47-100 (203)
9 1b5f_B Protein (cardosin A); h 71.9 13 0.00045 22.1 5.9 59 12-71 4-85 (87)
10 3ka2_A [L-Ala51;Gly51']HIV-1 p 41.4 84 0.0029 22.5 6.3 53 6-62 151-203 (203)
11 1oew_A Endothiapepsin; hydrola 39.9 96 0.0033 22.5 6.6 59 12-71 251-328 (329)
12 2l01_A Uncharacterized protein 39.7 16 0.00053 22.7 1.9 31 41-71 38-68 (77)
13 3c9x_A Trichoderma reesei aspa 39.6 90 0.0031 22.7 6.5 58 13-71 253-328 (329)
14 3qvc_A Histo-aspartic protease 39.6 62 0.0021 25.3 5.8 59 12-71 369-447 (451)
15 1izd_A Aspartic proteinase; su 37.5 78 0.0027 23.0 5.8 59 12-71 247-321 (323)
16 1yg9_A Aspartic protease BLA G 37.3 95 0.0033 22.6 6.3 59 12-71 253-327 (330)
17 1ibq_A Aspergillopepsin; aspar 35.0 1.1E+02 0.0038 22.1 6.3 59 12-71 247-323 (325)
18 1bxo_A Protein (penicillopepsi 34.0 88 0.003 22.7 5.6 59 12-71 246-321 (323)
19 1am5_A Pepsin, acid proteinase 32.3 1E+02 0.0034 22.2 5.7 58 13-71 245-322 (324)
20 2d10_E Ezrin-radixin-moesin bi 31.7 13 0.00046 18.8 0.5 9 48-56 15-23 (28)
21 3cms_A Chymosin B; hydrolase, 31.6 1E+02 0.0034 22.3 5.6 58 13-71 248-321 (323)
22 1dpj_A Proteinase A; proteinas 31.5 1.2E+02 0.004 21.9 5.9 58 13-71 250-327 (329)
23 2d11_E Na(+)/H(+) exchange reg 30.6 14 0.00049 18.6 0.5 9 48-56 15-23 (28)
24 2l02_A Uncharacterized protein 29.4 23 0.00077 22.2 1.4 32 40-71 34-65 (82)
25 1htr_B Gastricsin; aspartyl pr 29.2 1.6E+02 0.0054 21.2 6.3 59 12-71 248-327 (329)
26 1miq_A Plasmepsin; aspartic pr 28.1 1.2E+02 0.0041 22.7 5.6 59 12-71 294-372 (375)
27 1lya_B Cathepsin D; lysosomal 27.4 1.5E+02 0.0051 20.2 6.7 59 12-71 157-239 (241)
28 1wkr_A Polyporopepsin; hydrola 27.2 1.3E+02 0.0043 21.9 5.5 60 12-72 244-332 (340)
29 2qcp_X Cation efflux system pr 25.0 18 0.00063 21.9 0.4 19 54-72 27-46 (80)
30 4aa9_A Chymosin; hydrolase, as 24.2 2E+02 0.0067 20.5 6.5 59 12-71 244-318 (320)
31 2apr_A Rhizopuspepsin; hydrola 22.1 2.2E+02 0.0074 20.5 5.9 60 12-72 249-323 (325)
32 2l55_A SILB,silver efflux prot 21.9 21 0.00071 21.9 0.2 19 54-72 21-40 (82)
33 2pma_A Uncharacterized protein 20.3 2.1E+02 0.0071 19.3 6.1 46 18-64 92-139 (146)
No 1
>3s8i_A Protein DDI1 homolog 1; protease, structural genomics, structural genomics consortiu retropepsin-like domain, protein turnover, hydrolase; 1.70A {Homo sapiens}
Probab=99.46 E-value=1.1e-13 Score=96.97 Aligned_cols=76 Identities=13% Similarity=0.092 Sum_probs=63.8
Q ss_pred EecCCCeEEecceeeceEEEEcCEEEEeeeEeecCCCcceeechhHHhhhCceEEeccceEEEEEeCCeEEEEEecC
Q 039663 6 DVGNGERIRSEGHCSKVKFEMQGVEFEVDFHILDFSGANAGLAVQWLEKLGKIVTDHKALTMEFTYRRQPIKLVGAQ 82 (102)
Q Consensus 6 ~va~G~~l~~~~~~~~v~~~iqg~~F~~dl~vL~L~~~DvILGmdWL~~~g~i~~D~~~~tm~f~~~g~~v~l~g~~ 82 (102)
.++..+...+.+.++.++++|+++.|..++.|+|...+|+|||||||++++. .+||++++|+|...+++|.|-...
T Consensus 70 ~a~g~G~~~~~g~v~~~~I~Ig~~~~~~~~~Vle~~~~d~LLGmD~L~~~~~-~ID~~~~~L~l~~~~~~~pfl~~~ 145 (148)
T 3s8i_A 70 VAKGVGTQRIIGRVHLAQIQIEGDFLQCSFSILEDQPMDMLLGLDMLRRHQC-SIDLKKNVLVIGTTGTQTYFLPEG 145 (148)
T ss_dssp ECCC---CEEEEEEEEEEEEETTEEEEEEEEEETTCSSSEEECHHHHHHTTC-EEETTTTEEECTTTCCEEECCCGG
T ss_pred EEEcCCccEEEEEEEEEEEEECCEEEEEEEEEeCCCCcCeeccHHHHHhCCE-EEEcCCCEEEEccCCeEEeecCcc
Confidence 3333345677888999999999999999999999999999999999999994 899999999998777888776543
No 2
>2i1a_A DNA damage-inducible protein DDI1; acid protease fold, dimer, retroviral protease domain, protein turnover; HET: DNA; 2.30A {Saccharomyces cerevisiae}
Probab=99.12 E-value=2.2e-10 Score=78.41 Aligned_cols=63 Identities=11% Similarity=0.208 Sum_probs=54.2
Q ss_pred ecceeeceEEEEcCEEEEeeeEeecCCCcceeechhHHhhhCceEEeccceEEEEEeCCeEEEEEec
Q 039663 15 SEGHCSKVKFEMQGVEFEVDFHILDFSGANAGLAVQWLEKLGKIVTDHKALTMEFTYRRQPIKLVGA 81 (102)
Q Consensus 15 ~~~~~~~v~~~iqg~~F~~dl~vL~L~~~DvILGmdWL~~~g~i~~D~~~~tm~f~~~g~~v~l~g~ 81 (102)
+.+.+...++++++..|..++.|+| .++|+|||||||++++. .+||++++|+|. ++++.+...
T Consensus 81 ~~~~~~~~~i~ig~~~~~~~~~vl~-~~~d~iLG~d~L~~~~~-~ID~~~~~l~l~--~~~~~f~~~ 143 (148)
T 2i1a_A 81 IIGRIHQAQVKIETQYIPCSFTVLD-TDIDVLIGLDMLKRHLA-CVDLKENVLRIA--EVETSFLSE 143 (148)
T ss_dssp -CEEEEEEEEEETTEEEEEEEEEEC-SSCSEEECHHHHHHTTC-EEETTTTEEEET--TEEEECCCT
T ss_pred cccEEEEEEEEECCEEeceeEEEec-CCCCeEecHHHHhhCCE-EEECCCCEEEEc--cEEEecCCh
Confidence 4667778899999999999999999 78999999999999975 899999999985 466666543
No 3
>3slz_A GAG-Pro-POL polyprotein; beta sheet and dimer, protease, peptide inhibitor, TL-3 PEPS virus, hydrolase-hydrolase inhibitor complex; HET: 3TL; 1.40A {Dg-75 murine leukemia virus} PDB: 3nr6_A* 3sm1_A* 3sm2_A* 4exh_A*
Probab=96.74 E-value=0.0033 Score=43.17 Aligned_cols=57 Identities=18% Similarity=0.055 Sum_probs=39.6
Q ss_pred ceEEEecCCCeEEecceeeceEEEEcCEEEEeeeEeecCCCcceeechhHHhhhCceEEec
Q 039663 2 SFLVDVGNGERIRSEGHCSKVKFEMQGVEFEVDFHILDFSGANAGLAVQWLEKLGKIVTDH 62 (102)
Q Consensus 2 ~~~V~va~G~~l~~~~~~~~v~~~iqg~~F~~dl~vL~L~~~DvILGmdWL~~~g~i~~D~ 62 (102)
|..|.-++|. +. -.....++++|.|..+...+.|++- ...-|||+|||.++|. .+|+
T Consensus 58 p~~I~GiGG~-i~-vr~~~~i~IeI~g~~~~~~~lV~~~-tPvnLLGrd~Ltqlg~-tL~f 114 (132)
T 3slz_A 58 SAWVQGATGG-KR-YRWTTDRKVHLATGKVTHSFLHVPD-CPYPLLGRDLLTKLKA-QIHF 114 (132)
T ss_dssp EEEEECSSCE-EE-EEEECCEEEEETTEEEEECCEECTT-SSSCEECHHHHHHHTC-EEEE
T ss_pred ceEEEccCCE-EE-EEEEeeeEEEECCeeecceEEEECC-CCccEECHhhHhhCCc-EEEC
Confidence 3456666665 44 3334467999999999888866432 2457899999999995 3444
No 4
>1fmb_A EIAV protease; hydrolase (acid proteinase), RNA-directed DNA polymerase, AS protease, endonuclease, polyprotein; HET: HYB; 1.80A {Equine infectious anemia virus} SCOP: b.50.1.1 PDB: 2fmb_A*
Probab=94.60 E-value=0.064 Score=35.14 Aligned_cols=52 Identities=17% Similarity=0.194 Sum_probs=42.0
Q ss_pred EecCCCeEEecceeeceEEEEcCEEEEeeeEeecCCCcceeechhHHhhhCceEEec
Q 039663 6 DVGNGERIRSEGHCSKVKFEMQGVEFEVDFHILDFSGANAGLAVQWLEKLGKIVTDH 62 (102)
Q Consensus 6 ~va~G~~l~~~~~~~~v~~~iqg~~F~~dl~vL~L~~~DvILGmdWL~~~g~i~~D~ 62 (102)
..+.|+.++.. ..++++++.|+.....++|-|. ..=|+|-|||+++|. .+||
T Consensus 53 i~GiGG~i~v~--~~~i~i~i~g~~~~gtvlv~~t--p~niiGRd~L~qlg~-tLnf 104 (104)
T 1fmb_A 53 IGGVGGNVETF--STPVTIKKKGRHIKTRMLVADI--PVTILGRDILQDLGA-KLVL 104 (104)
T ss_dssp EEETTEEECCE--EEEEEEEETTEEEEEEEEEESC--SSCEECHHHHHHTTC-CCCC
T ss_pred EEeCCCeEEee--EeeeEEEECCeEEEEEEEECCC--CCCEecHhHHhhcCc-EEeC
Confidence 45678888887 6899999999999999888664 356999999999985 4443
No 5
>3ec0_A Protease; HIV-2, inhibitor, hydrolase; HET: GRL; 1.18A {Human immunodeficiency virus type 2} SCOP: b.50.1.1 PDB: 1hii_A* 1hsi_A 1hsh_A* 1idb_A* 1jld_A* 2mip_A 1ida_A* 3ebz_A* 3ecg_A* 3s45_A* 4upj_A* 1ivq_A* 1ivp_A 2hpf_A 3upj_A* 2hpe_A* 5upj_A* 6upj_A* 1sip_A 1tcw_A* ...
Probab=94.09 E-value=0.34 Score=31.58 Aligned_cols=55 Identities=16% Similarity=0.099 Sum_probs=43.8
Q ss_pred EEEecCCCeEEecceeeceEEEEcCEEEEeeeEeecCCCcceeechhHHhhhCceEEec
Q 039663 4 LVDVGNGERIRSEGHCSKVKFEMQGVEFEVDFHILDFSGANAGLAVQWLEKLGKIVTDH 62 (102)
Q Consensus 4 ~V~va~G~~l~~~~~~~~v~~~iqg~~F~~dl~vL~L~~~DvILGmdWL~~~g~i~~D~ 62 (102)
+...+-|+.++..+. .++++++.|+.....++|=|.. .=|+|-|+|+++|. .+||
T Consensus 45 k~igGiGG~i~v~qy-~~i~iei~g~~~~gtvlV~~tP--vniiGRnlLtqlG~-tLnf 99 (99)
T 3ec0_A 45 KIVGGIGGFINTKEY-KNVEIEVLNKKVRATIMTGDTP--INIFGRNILTALGM-SLNL 99 (99)
T ss_dssp EEEEETTEEEEEEEE-EEEEEEETTEEEEEEEEEECCS--SCEECHHHHHHHTC-EEEC
T ss_pred eEEEecCCcEeeeEE-eeEEEEECCeEEEEEEEeCCCC--cCeeehhhHhhcCc-EEeC
Confidence 356788999988884 7899999999999998885543 25799999999995 5554
No 6
>2hs1_A HIV-1 protease; ultra-high resolution active site surface binding site, HYDR; HET: 017; 0.84A {Human immunodeficiency virus 1} PDB: 3nu4_A* 3tl9_A* 3tkw_A* 3tkg_A* 3ndu_A* 3ndt_A* 3k4v_A* 3a2o_A* 1fgc_C* 2a1e_A* 2aod_A* 2aoi_A* 2aoj_A* 2hb3_A* 2ien_A* 1sdt_A* 2z4o_A* 2zye_A* 2nmw_A* 3b7v_A* ...
Probab=92.17 E-value=0.75 Score=29.81 Aligned_cols=54 Identities=13% Similarity=0.120 Sum_probs=42.4
Q ss_pred EEecCCCeEEecceeeceEEEEcCEEEEeeeEeecCCCcceeechhHHhhhCceEEec
Q 039663 5 VDVGNGERIRSEGHCSKVKFEMQGVEFEVDFHILDFSGANAGLAVQWLEKLGKIVTDH 62 (102)
Q Consensus 5 V~va~G~~l~~~~~~~~v~~~iqg~~F~~dl~vL~L~~~DvILGmdWL~~~g~i~~D~ 62 (102)
...+.|+.++..+ ..++++++.|+.....++|-|.. . =|+|-|||+++|. .+||
T Consensus 46 ~igGiGG~i~v~q-y~qi~iei~g~~~~gtvlV~~tP-v-niiGRd~Ltqlg~-tLnf 99 (99)
T 2hs1_A 46 MIGGIGGFIKVRQ-YDQIIIEIAGHKAIGTVLVGPTP-V-NIIGRNLLTQIGA-TLNF 99 (99)
T ss_dssp EEEETTEEEEEEE-EEEEEEEETTEEEEEEEEESCCS-S-CEECHHHHTTTTC-EEEC
T ss_pred EEEeCCCcEeeeE-eccEEEEEeCCEEEEEEEeCCCc-c-CchhHhHHHHcCC-EEeC
Confidence 4566788877765 46899999999999999886654 2 4899999999995 4554
No 7
>2hah_A Protease, retropepsin; retroviral, aspartyl, hydrolase-hydrolase complex; HET: 3TL; 1.70A {Feline immunodeficiency virus} PDB: 3ogp_A* 3ogq_A* 2fiv_A* 6fiv_A* 3fiv_A* 5fiv_A* 4fiv_A* 1fiv_A* 1b11_A*
Probab=80.71 E-value=3.6 Score=27.22 Aligned_cols=51 Identities=20% Similarity=0.133 Sum_probs=40.2
Q ss_pred EecCCCeEEecceeeceEEEEcCEE-----EEeeeEeec-CCCcceeechhHHhhhCc
Q 039663 6 DVGNGERIRSEGHCSKVKFEMQGVE-----FEVDFHILD-FSGANAGLAVQWLEKLGK 57 (102)
Q Consensus 6 ~va~G~~l~~~~~~~~v~~~iqg~~-----F~~dl~vL~-L~~~DvILGmdWL~~~g~ 57 (102)
..+-|+.++.. ...++++++.|+. ....++|.| ...--=|+|=|||+++|.
T Consensus 56 igGiGG~i~v~-qy~qv~iei~g~~~~~~~~~gtvlV~p~tP~~vniiGRd~Ltqlg~ 112 (116)
T 2hah_A 56 IGGIGGFIRGT-NYINVHLEIRDENYKTQCIFGNVCVLEDNSTPVNILGRDNMIKFNI 112 (116)
T ss_dssp EEETTEEEEEE-EEEEEEEEECCTTSCCEEEEEEEEEETTCCCSSEEECHHHHTTTTC
T ss_pred EecCCCceeee-EEccEEEEEeCCCCCcceeEEEEEECCCCCccccEecHHHHhHcCC
Confidence 56778888876 4568999999988 888888888 541124899999999985
No 8
>3ka2_A [L-Ala51;Gly51']HIV-1 protease; beta-barrel, hydrolase-hydrolase inhibitor complex; HET: YCM 2NC; 1.40A {Synthetic} PDB: 3fsm_A* 3gi0_A* 2o40_A* 3hzc_A* 3hlo_A* 3iaw_A* 3nxe_A* 3nxn_A* 4epj_A 4ep2_A 4ep3_A 4eq0_A 4eqj_A 1hvc_A* 1g6l_A 2whh_A* 1lv1_A* 3dox_A 3kt5_A 3kt2_A ...
Probab=76.00 E-value=10 Score=27.37 Aligned_cols=54 Identities=11% Similarity=0.046 Sum_probs=43.6
Q ss_pred EecCCCeEEecceeeceEEEEcCEEEEeeeEeecCCCcceeechhHHhhhCceEEecc
Q 039663 6 DVGNGERIRSEGHCSKVKFEMQGVEFEVDFHILDFSGANAGLAVQWLEKLGKIVTDHK 63 (102)
Q Consensus 6 ~va~G~~l~~~~~~~~v~~~iqg~~F~~dl~vL~L~~~DvILGmdWL~~~g~i~~D~~ 63 (102)
..+-|+.++.... .++++++.|+.....+.|-|. ..=|+|-|-|+++|. .+|+.
T Consensus 47 igGIGG~i~vrqy-~~i~iei~g~~~~gtvlVg~t--PvnIiGRd~LtqlG~-tLnf~ 100 (203)
T 3ka2_A 47 IGGIAGFIKVRQY-DQIPVEIXGHKAIGTVLVGPT--PVNIIGRNLLTQIGX-TLNFX 100 (203)
T ss_dssp EEETTEEEEEEEE-EEEEEEETTEEEEEEEEESCC--SSCEECHHHHTTTTC-EEEGG
T ss_pred EEEccCcEEEEEE-cceeEEEcCeEEEEEEeeCCC--CcCccchhhhhhcCc-eEEec
Confidence 4567887877765 589999999999888888553 444899999999995 78887
No 9
>1b5f_B Protein (cardosin A); hydrolase, aspartic proteinase; HET: NAG FUC BMA MAN; 1.72A {Cynara cardunculus} SCOP: b.50.1.2
Probab=71.90 E-value=13 Score=22.09 Aligned_cols=59 Identities=17% Similarity=0.211 Sum_probs=41.2
Q ss_pred eEEecc--eeeceEEEEcCEEEEee---------------eE--eecC----CCcceeechhHHhhhCceEEeccceEEE
Q 039663 12 RIRSEG--HCSKVKFEMQGVEFEVD---------------FH--ILDF----SGANAGLAVQWLEKLGKIVTDHKALTME 68 (102)
Q Consensus 12 ~l~~~~--~~~~v~~~iqg~~F~~d---------------l~--vL~L----~~~DvILGmdWL~~~g~i~~D~~~~tm~ 68 (102)
.+.|+. ..|.+.+.++|.+|... ++ +.++ .+-..|||--+|+.+= +..|..+.++-
T Consensus 4 ~v~C~~~~~~P~i~f~~gg~~~~l~~~~yi~~~~~~~~~~C~~~~~~~~~~~~~~~~ILGd~Fl~~~y-~vfD~~~~riG 82 (87)
T 1b5f_B 4 QVDCNTLSSMPNVSFTIGGKKFGLTPEQYILKVGKGEATQCISGFTAMDATLLGPLWILGDVFMRPYH-TVFDYGNLLVG 82 (87)
T ss_dssp EECGGGGGGCCCEEEEETTEEEEECHHHHEEEESCTTTCEEEESEEECCCBSSSBEEEECHHHHTTEE-EEEETTTTEEE
T ss_pred EEECCCCCcCCcEEEEECCEEEEECHHHhEEEccCCCCCEEEEEEEECCCCCCCCeEEechHHhccEE-EEEECCCCEEE
Confidence 466764 46888888888877551 22 1221 2335799999999884 57999999988
Q ss_pred EEe
Q 039663 69 FTY 71 (102)
Q Consensus 69 f~~ 71 (102)
|..
T Consensus 83 fA~ 85 (87)
T 1b5f_B 83 FAE 85 (87)
T ss_dssp EEE
T ss_pred EEE
Confidence 854
No 10
>3ka2_A [L-Ala51;Gly51']HIV-1 protease; beta-barrel, hydrolase-hydrolase inhibitor complex; HET: YCM 2NC; 1.40A {Synthetic} PDB: 3fsm_A* 3gi0_A* 2o40_A* 3hzc_A* 3hlo_A* 3iaw_A* 3nxe_A* 3nxn_A* 4epj_A 4ep2_A 4ep3_A 4eq0_A 4eqj_A 1hvc_A* 1g6l_A 2whh_A* 1lv1_A* 3dox_A 3kt5_A 3kt2_A ...
Probab=41.42 E-value=84 Score=22.52 Aligned_cols=53 Identities=13% Similarity=0.090 Sum_probs=41.9
Q ss_pred EecCCCeEEecceeeceEEEEcCEEEEeeeEeecCCCcceeechhHHhhhCceEEec
Q 039663 6 DVGNGERIRSEGHCSKVKFEMQGVEFEVDFHILDFSGANAGLAVQWLEKLGKIVTDH 62 (102)
Q Consensus 6 ~va~G~~l~~~~~~~~v~~~iqg~~F~~dl~vL~L~~~DvILGmdWL~~~g~i~~D~ 62 (102)
.-+-|+.++.... .++++++.|+.....++|-|. .-=|+|=|=|.++|. .+||
T Consensus 151 igGiGg~i~v~qy-~~i~iei~g~~~~~tvlVgpt--PvniiGRn~LtqlG~-tl~f 203 (203)
T 3ka2_A 151 IGGIGGFIKVRQY-DQIPVEIXGHKAIGTVLVGPT--PVNIIGRNLLTQIGX-TLNF 203 (203)
T ss_dssp EEETTEEEEEEEE-EEEEEEETTEEEEEEEEESCC--SSCEECHHHHGGGTC-EEEC
T ss_pred EeeccceEEEEEe-ccEEEEECCeEEEEEEEECCC--CcCeechhhHHHhCC-eeeC
Confidence 4466888887776 689999999999999988775 344789999999995 4553
No 11
>1oew_A Endothiapepsin; hydrolase, aspartic proteinase mechanism, atomic resolution, succinimide, anisotropic refinement; HET: SUI; 0.9A {Cryphonectria parasitica} SCOP: b.50.1.2 PDB: 1gkt_A* 1gvt_A* 1gvv_A* 1gvw_A* 1gvx_A* 1gvu_A* 1oex_A* 2jji_A* 2jjj_A* 2vs2_A* 3uri_A* 3urj_A* 3url_A* 3pww_A* 1e80_E* 1e81_E* 1e82_E* 1e5o_E* 1eed_P* 1epl_E* ...
Probab=39.94 E-value=96 Score=22.52 Aligned_cols=59 Identities=8% Similarity=-0.035 Sum_probs=42.2
Q ss_pred eEEecceeeceEEEEcCEEEEee--------------eEee---cCC-CcceeechhHHhhhCceEEec-cceEEEEEe
Q 039663 12 RIRSEGHCSKVKFEMQGVEFEVD--------------FHIL---DFS-GANAGLAVQWLEKLGKIVTDH-KALTMEFTY 71 (102)
Q Consensus 12 ~l~~~~~~~~v~~~iqg~~F~~d--------------l~vL---~L~-~~DvILGmdWL~~~g~i~~D~-~~~tm~f~~ 71 (102)
.+.|....|.+.+.++|.+|... .-++ +.. +-..|||--+|+.+= +..|. .++++-|..
T Consensus 251 ~~~C~~~~P~i~f~fgg~~~~ip~~~~~~~~~~~~~~~C~~~i~~~~~~~~~iLG~~fl~~~y-~vfD~~~~~riGfA~ 328 (329)
T 1oew_A 251 VFPCSATLPSFTFGVGSARIVIPGDYIDFGPISTGSSSCFGGIQSSAGIGINIFGDVALKAAF-VVFNGATTPTLGFAS 328 (329)
T ss_dssp EEETTCCCCCEEEEETTEEEEECHHHHEEEESSTTCSEEEESEEESTTTSSEEECHHHHTTEE-EEEECSSSCEEEEEE
T ss_pred EEECCCCCCcEEEEECCEEEEECHHHeeeeecCCCCCeEEEEEEeCCCCCceEEChHHhcCEE-EEEECCCCceEEEec
Confidence 36788777899999999887531 1111 121 234799999999884 57999 999998864
No 12
>2l01_A Uncharacterized protein; structural genomics, northeast structural genomics consortiu PSI-2, protein structure initiative; NMR {Bacteroides vulgatus}
Probab=39.72 E-value=16 Score=22.68 Aligned_cols=31 Identities=19% Similarity=0.237 Sum_probs=26.2
Q ss_pred CCcceeechhHHhhhCceEEeccceEEEEEe
Q 039663 41 SGANAGLAVQWLEKLGKIVTDHKALTMEFTY 71 (102)
Q Consensus 41 ~~~DvILGmdWL~~~g~i~~D~~~~tm~f~~ 71 (102)
..-|+-|++=||++-+.|.++-.+..+.+..
T Consensus 38 ~d~el~lAiGWLaREdKI~~~~~~~~l~v~l 68 (77)
T 2l01_A 38 ADKDFFLGLGWLLREDKVVTSEVEGEIFVKL 68 (77)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEEETTEEEEEE
T ss_pred CHHHHHHHHHHHhhcCceEEEeeCCEEEEEe
Confidence 3447889999999999999999988888764
No 13
>3c9x_A Trichoderma reesei aspartic protease; aspartic proteinase, aspartyl protease, hydrolase; 1.70A {Trichoderma reesei} PDB: 3c9y_A* 3emy_A*
Probab=39.61 E-value=90 Score=22.67 Aligned_cols=58 Identities=9% Similarity=-0.008 Sum_probs=41.5
Q ss_pred EEecceeeceEEEEcCEEEEee---e-----------Eee---cCC-CcceeechhHHhhhCceEEeccceEEEEEe
Q 039663 13 IRSEGHCSKVKFEMQGVEFEVD---F-----------HIL---DFS-GANAGLAVQWLEKLGKIVTDHKALTMEFTY 71 (102)
Q Consensus 13 l~~~~~~~~v~~~iqg~~F~~d---l-----------~vL---~L~-~~DvILGmdWL~~~g~i~~D~~~~tm~f~~ 71 (102)
+.|....|.+.+.++|.+|... + -++ +.. +-..|||--+|+.+= +..|..++++-|..
T Consensus 253 ~~C~~~~P~i~f~f~g~~~~ip~~~~~~~~~~~~~~~C~~~i~~~~~~~~~ILG~~fl~~~y-~vfD~~~~riGfA~ 328 (329)
T 3c9x_A 253 FDCDEDLPSFSFGVGSSTITIPGDLLNLTPLEEGSSTCFGGLQSSSGIGINIFGDVALKAAL-VVFDLGNERLGWAQ 328 (329)
T ss_dssp EETTCCCCCEEEEETTEEEEECGGGGEEEESSTTCSEEEESEEECTTTTSEEECHHHHTTEE-EEEETTTTEEEEEE
T ss_pred EECCCCCCcEEEEECCEEEEECHHHeeeeccCCCCCeEEEEEEcCCCCCcEEEChHHhccEE-EEEECCCCEEeEec
Confidence 6788777899999998877532 1 111 111 234799999999885 57999999998864
No 14
>3qvc_A Histo-aspartic protease; HAP, plasmepsin, zymogen, hydrolase; 2.10A {Plasmodium falciparum} PDB: 3qvi_A* 3fns_A 3fnt_A* 3fnu_A*
Probab=39.58 E-value=62 Score=25.26 Aligned_cols=59 Identities=10% Similarity=0.089 Sum_probs=43.4
Q ss_pred eEEec-ceeeceEEEEcCEEEEeee--Eeec------------C---C--CcceeechhHHhhhCceEEeccceEEEEEe
Q 039663 12 RIRSE-GHCSKVKFEMQGVEFEVDF--HILD------------F---S--GANAGLAVQWLEKLGKIVTDHKALTMEFTY 71 (102)
Q Consensus 12 ~l~~~-~~~~~v~~~iqg~~F~~dl--~vL~------------L---~--~~DvILGmdWL~~~g~i~~D~~~~tm~f~~ 71 (102)
.+.|. ...|.+.+.++|.+|.... ++++ + . +-..|||..+|+.+= +..|+.++++-|..
T Consensus 369 ~v~C~~~~~P~itf~fgg~~i~lp~~~yi~~~~~~~~~~C~~~i~~~~~~~~~~ILG~~FLr~~Y-vVfD~~n~rIGfA~ 447 (451)
T 3qvc_A 369 VTTCGNTKLPTLEYRSPNKVYTLEPKQYLEPLENIFSALCMLNIVPIDLEKNTFVLGDPFMRKYF-TVYDYDNHTVGFAL 447 (451)
T ss_dssp EEETTCTTCCCEEEEETTEEEEECHHHHEEECTTTSTTEEEECEEECCCSTTEEEECHHHHHHEE-EEEETTTTEEEEEE
T ss_pred EeeCCcCcCCcEEEEECCEEEEEcHHHheeecccCCCCeEEEEEEeCCCCCCCEEECHHHhhcEE-EEEECCCCEEEEEE
Confidence 46777 5668999999998886532 1221 1 1 235899999999985 57999999999865
No 15
>1izd_A Aspartic proteinase; sugar binding, acid protease, hydrolase; HET: MAN; 1.90A {Aspergillus oryzae} SCOP: b.50.1.2 PDB: 1ize_A*
Probab=37.53 E-value=78 Score=22.99 Aligned_cols=59 Identities=14% Similarity=0.033 Sum_probs=42.8
Q ss_pred eEEecceeeceEEEEcCEEEEee-------------eE--eecCC-CcceeechhHHhhhCceEEeccceEEEEEe
Q 039663 12 RIRSEGHCSKVKFEMQGVEFEVD-------------FH--ILDFS-GANAGLAVQWLEKLGKIVTDHKALTMEFTY 71 (102)
Q Consensus 12 ~l~~~~~~~~v~~~iqg~~F~~d-------------l~--vL~L~-~~DvILGmdWL~~~g~i~~D~~~~tm~f~~ 71 (102)
.+.|....|.+.+.++|.+|... ++ +.+.. +-..|||--+|+.+= +..|..++++-|..
T Consensus 247 ~~~C~~~~P~i~f~fgg~~~~i~~~~~~~~~~~~~~C~~~i~~~~~~~~~IlG~~fl~~~y-~vfD~~~~riGfA~ 321 (323)
T 1izd_A 247 VFPSSASLPDFSVTIGDYTATVPGEYISFADVGNGQTFGGIQSNSGIGFSIFGDVFLKSQY-VVFDASGPRLGFAA 321 (323)
T ss_dssp EEETTCCCCCEEEEETTEEEEECHHHHEEEECSTTEEEESEEECTTTSSEEECHHHHTTEE-EEEETTTTEEEEEE
T ss_pred EEECCCCCceEEEEECCEEEecCHHHeEEecCCCCeEEEEEEcCCCCCcEEEChHHhcCEE-EEEECCCCEEEEee
Confidence 46788777899999999888642 11 11221 235799999999885 57999999998864
No 16
>1yg9_A Aspartic protease BLA G 2; allegren, hydrolase, allergen; HET: NAG; 1.30A {Blattella germanica} PDB: 2nr6_A* 3liz_A*
Probab=37.28 E-value=95 Score=22.59 Aligned_cols=59 Identities=14% Similarity=0.216 Sum_probs=43.3
Q ss_pred eEEecc--eeeceEEEEcCEEEEee----------eEeecC----CCcceeechhHHhhhCceEEeccceEEEEEe
Q 039663 12 RIRSEG--HCSKVKFEMQGVEFEVD----------FHILDF----SGANAGLAVQWLEKLGKIVTDHKALTMEFTY 71 (102)
Q Consensus 12 ~l~~~~--~~~~v~~~iqg~~F~~d----------l~vL~L----~~~DvILGmdWL~~~g~i~~D~~~~tm~f~~ 71 (102)
.+.|.. ..|.+.+.++|.+|... .-++.+ .+-..|||--+|+.+= +..|..++++-|..
T Consensus 253 ~~~C~~~~~~p~i~f~fgg~~~~l~~~~y~~~~~~~C~~~i~~~~~~~~~ilG~~fl~~~y-~vfD~~~~riGfA~ 327 (330)
T 1yg9_A 253 KLDCSKIPSLPDVTFVINGRNFNISSQYYIQQNGNLCYSGFQPCGHSDHFFIGDFFVDHYY-SEFNWENKTMGFGR 327 (330)
T ss_dssp EECGGGGGGSCCEEEEETTEEEEECHHHHEEEETTEEEESEEEETTCSSEEECHHHHTTEE-EEEETTTTEEEEEE
T ss_pred EEECCCccccCcEEEEECCEEEEECHHHhcccCCCcEEEEEEeCCCCCeEEecHHHhhheE-EEEECCCCEEEEEE
Confidence 466775 46889999999888753 122222 2335899999999884 57999999999865
No 17
>1ibq_A Aspergillopepsin; aspartic proteinase, hydrolase; HET: MAN; 2.14A {Aspergillus phoenicis} SCOP: b.50.1.2
Probab=35.04 E-value=1.1e+02 Score=22.12 Aligned_cols=59 Identities=10% Similarity=-0.033 Sum_probs=42.4
Q ss_pred eEEecceeeceEEEEcCEEEEee--------------eEee---cCC-CcceeechhHHhhhCceEEeccceEEEEEe
Q 039663 12 RIRSEGHCSKVKFEMQGVEFEVD--------------FHIL---DFS-GANAGLAVQWLEKLGKIVTDHKALTMEFTY 71 (102)
Q Consensus 12 ~l~~~~~~~~v~~~iqg~~F~~d--------------l~vL---~L~-~~DvILGmdWL~~~g~i~~D~~~~tm~f~~ 71 (102)
.+.|....|.+.+.++|.+|... .-++ +.. +-..|||--+|+.+= +..|..++++-|..
T Consensus 247 ~~~C~~~~P~i~f~fgg~~~~i~~~~~~~~~~~~~~~~C~~~i~~~~~~~~~iLG~~fl~~~y-~vfD~~~~~igfA~ 323 (325)
T 1ibq_A 247 VFSCSTDLPDFTVVIGDYKAVVPGKYINYAPVSTGSSTCYGGIQSNSGLGLSILGDVFLKSQY-VVFNSEGPKLGFAA 323 (325)
T ss_dssp EEETTCCCCCEEEEETTEEEEECHHHHEEEESSTTCSEEEESEEECTTTCSEEECHHHHTTEE-EEEETTTTEEEEEE
T ss_pred EEEcCCCCCcEEEEECCEEEEECHHHhcccccCCCCCeEEEEEEcCCCCCceEEChHHhcCEE-EEEECCCCEEEeee
Confidence 56788777899999999887532 1111 111 224799999999885 57999999998864
No 18
>1bxo_A Protein (penicillopepsin); hydrolase, phosphonate inhibitors, macrocycle; HET: MAN PP7; 0.95A {Penicillium janthinellum} SCOP: b.50.1.2 PDB: 1apu_E* 1apv_E* 1apw_E* 1apt_E* 1bxq_A* 1ppk_E* 1ppl_E* 1ppm_E* 2wea_A* 2web_A* 2wec_A* 2wed_A* 3app_A
Probab=33.97 E-value=88 Score=22.66 Aligned_cols=59 Identities=12% Similarity=0.022 Sum_probs=42.2
Q ss_pred eEEecceeeceEEEEcCEEEEeee-------------Eee---cCC-CcceeechhHHhhhCceEEeccceEEEEEe
Q 039663 12 RIRSEGHCSKVKFEMQGVEFEVDF-------------HIL---DFS-GANAGLAVQWLEKLGKIVTDHKALTMEFTY 71 (102)
Q Consensus 12 ~l~~~~~~~~v~~~iqg~~F~~dl-------------~vL---~L~-~~DvILGmdWL~~~g~i~~D~~~~tm~f~~ 71 (102)
.+.|....|.+.+.++|.+|.... -++ +.. +-..|||--+|+.+= +..|..++++-|..
T Consensus 246 ~~~C~~~~P~i~f~fgg~~~~l~~~~~~~~~~~~~~~C~~~i~~~~~~~~~ILG~~fl~~~y-~vfD~~~~riGfA~ 321 (323)
T 1bxo_A 246 VFDCSTNLPDFSVSISGYTATVPGSLINYGPSGDGSTCLGGIQSNSGIGFSIFGDIFLKSQY-VVFDSDGPQLGFAP 321 (323)
T ss_dssp EECTTCCCCCEEEEETTEEEEECHHHHEEEECSSSSCEEESEEECTTCSSEEECHHHHTTEE-EEEETTTTEEEEEE
T ss_pred EEECCCCCceEEEEECCEEEEECHHHeEEeccCCCCeEEEEEECCCCCCcEEEChHHHcCEE-EEEECCCCEEEEec
Confidence 356877778999999998876421 111 111 234799999999884 57999999998864
No 19
>1am5_A Pepsin, acid proteinase; aspartyl protease, hydrolase; 2.16A {Gadus morhua} SCOP: b.50.1.2
Probab=32.35 E-value=1e+02 Score=22.25 Aligned_cols=58 Identities=10% Similarity=0.087 Sum_probs=41.9
Q ss_pred EEecc--eeeceEEEEcCEEEEee-----------eE--eecC-----CCcceeechhHHhhhCceEEeccceEEEEEe
Q 039663 13 IRSEG--HCSKVKFEMQGVEFEVD-----------FH--ILDF-----SGANAGLAVQWLEKLGKIVTDHKALTMEFTY 71 (102)
Q Consensus 13 l~~~~--~~~~v~~~iqg~~F~~d-----------l~--vL~L-----~~~DvILGmdWL~~~g~i~~D~~~~tm~f~~ 71 (102)
+.|.. ..|.+.+.++|.+|... ++ +.+. .+-..|||--+|+.+= +..|..++++-|..
T Consensus 245 ~~C~~~~~~P~i~f~f~g~~~~i~~~~y~~~~~~~C~~~~~~~~~~~~~~~~~ilG~~fl~~~y-~vfD~~~~~igfa~ 322 (324)
T 1am5_A 245 GNCASVQSLPDITFTINGVKQPLPPSAYIEGDQAFCTSGLGSSGVPSNTSELWIFGDVFLRNYY-TIYDRTNNKVGFAP 322 (324)
T ss_dssp CCTTSSSSSCCEEEEETTEEEEECHHHHEEESSSCEEECEEECCSCCSSSCEEEECHHHHHHEE-EEEETTTTEEEEEE
T ss_pred EeCCCcccCCcEEEEECCEEEEECHHHhcccCCCeEEEEEEECccCCCCCCcEEEChHHhccEE-EEEECCCCEEEEEE
Confidence 45664 46889999999888642 22 2222 2346899999999885 57999999998864
No 20
>2d10_E Ezrin-radixin-moesin binding phosphoprotein 50; protein-peptide complex, cell adhesion; 2.50A {Mus musculus}
Probab=31.72 E-value=13 Score=18.75 Aligned_cols=9 Identities=22% Similarity=0.556 Sum_probs=6.8
Q ss_pred chhHHhhhC
Q 039663 48 AVQWLEKLG 56 (102)
Q Consensus 48 GmdWL~~~g 56 (102)
-|||+.++-
T Consensus 15 ~MDw~kk~e 23 (28)
T 2d10_E 15 QMDWSKKNE 23 (28)
T ss_pred cccHHHHHH
Confidence 389998863
No 21
>3cms_A Chymosin B; hydrolase, acid proteinase; 2.00A {Bos taurus} SCOP: b.50.1.2 PDB: 4cms_A 1czi_E* 1cms_A
Probab=31.64 E-value=1e+02 Score=22.29 Aligned_cols=58 Identities=14% Similarity=0.127 Sum_probs=41.0
Q ss_pred EEecc--eeeceEEEEcCEEEEee-----------eE--eecC-CCcceeechhHHhhhCceEEeccceEEEEEe
Q 039663 13 IRSEG--HCSKVKFEMQGVEFEVD-----------FH--ILDF-SGANAGLAVQWLEKLGKIVTDHKALTMEFTY 71 (102)
Q Consensus 13 l~~~~--~~~~v~~~iqg~~F~~d-----------l~--vL~L-~~~DvILGmdWL~~~g~i~~D~~~~tm~f~~ 71 (102)
+.|.. ..|.+.+.++|.+|... ++ +.+. .+-..|||--+|+.+= +..|..++++-|..
T Consensus 248 ~~C~~~~~~P~i~f~f~g~~~~i~~~~y~~~~~~~C~~~i~~~~~~~~~iLG~~fl~~~y-~vfD~~~~~igfA~ 321 (323)
T 3cms_A 248 IDCDNLSYMPTVVFEINGKMYPLTPSAYTSQDQGFCTSGFQSENHSQKWILGDVFIREYY-SVFDRANNLVGLAK 321 (323)
T ss_dssp ECTTCTTTSCCEEEEETTEEEEECHHHHEEEETTEEEESEEEC---CCEEECHHHHTTEE-EEEETTTTEEEEEE
T ss_pred EECCCCccCceEEEEECCEEEEECHHHhccCCCCEEEEEEEeCCCCCcEEECHHHhhceE-EEEECCCCEEEEEE
Confidence 45663 46889999999888643 22 2222 2345899999999884 57999999998864
No 22
>1dpj_A Proteinase A; proteinase A, hydrolase-hydrolase inhibitor COM; HET: BMA MAN NAG; 1.80A {Saccharomyces cerevisiae} SCOP: b.50.1.2 PDB: 1dp5_A* 1fmu_A* 1fmx_A* 1fq5_A* 1fq4_A* 1fq6_A* 1fq7_A* 1fq8_A* 2jxr_A* 1g0v_A*
Probab=31.51 E-value=1.2e+02 Score=21.94 Aligned_cols=58 Identities=16% Similarity=0.214 Sum_probs=40.7
Q ss_pred EEecc--eeeceEEEEcCEEEEee-----------eE--eecC-----CCcceeechhHHhhhCceEEeccceEEEEEe
Q 039663 13 IRSEG--HCSKVKFEMQGVEFEVD-----------FH--ILDF-----SGANAGLAVQWLEKLGKIVTDHKALTMEFTY 71 (102)
Q Consensus 13 l~~~~--~~~~v~~~iqg~~F~~d-----------l~--vL~L-----~~~DvILGmdWL~~~g~i~~D~~~~tm~f~~ 71 (102)
+.|.. ..|.+.+.++|.+|... ++ +.+. .+-..|||--+|+.+= +..|..++++-|..
T Consensus 250 ~~C~~~~~~P~i~f~f~g~~~~i~~~~y~~~~~~~C~~~~~~~~~~~~~~~~~iLG~~fl~~~y-~vfD~~~~~igfA~ 327 (329)
T 1dpj_A 250 LDCNTRDNLPDLIFNFNGYNFTIGPYDYTLEVSGSCISAITPMDFPEPVGPLAIVGDAFLRKYY-SIYDLGNNAVGLAK 327 (329)
T ss_dssp ECGGGGGGCCCEEEEETTEEEEECTTTSEEEETTEEEECEEECCCCTTTCSEEEECHHHHTTEE-EEEETTTTEEEEEE
T ss_pred EECCCCCcCCcEEEEECCEEEEECHHHhEecCCCEEEEEEEecccCCCCCCcEEEChHHhcceE-EEEECCCCEEEEEE
Confidence 45664 45788888888877642 22 1222 2345899999999885 57999999998864
No 23
>2d11_E Na(+)/H(+) exchange regulatory cofactor NHE-RF2; protein-peptide complex, cell adhesion; 2.81A {Mus musculus}
Probab=30.64 E-value=14 Score=18.64 Aligned_cols=9 Identities=22% Similarity=0.523 Sum_probs=6.7
Q ss_pred chhHHhhhC
Q 039663 48 AVQWLEKLG 56 (102)
Q Consensus 48 GmdWL~~~g 56 (102)
-|||..++-
T Consensus 15 ~MDw~kk~e 23 (28)
T 2d11_E 15 QMDWNRKRE 23 (28)
T ss_pred cccHHHHHH
Confidence 389998763
No 24
>2l02_A Uncharacterized protein; structural genomics, northeast structural genomics consortiu PSI-2, protein structure initiative; NMR {Bacteroides thetaiotaomicron}
Probab=29.38 E-value=23 Score=22.19 Aligned_cols=32 Identities=31% Similarity=0.455 Sum_probs=25.5
Q ss_pred CCCcceeechhHHhhhCceEEeccceEEEEEe
Q 039663 40 FSGANAGLAVQWLEKLGKIVTDHKALTMEFTY 71 (102)
Q Consensus 40 L~~~DvILGmdWL~~~g~i~~D~~~~tm~f~~ 71 (102)
+..-|+-|++=||++-+.|.++-++..+.+..
T Consensus 34 l~d~el~lAIGWLaREdKI~~~~~~~~l~v~L 65 (82)
T 2l02_A 34 LSVESTALAVGWLARENKVVIERKNGLIEIYN 65 (82)
T ss_dssp CCHHHHHHHHHHHHTTTSEEEEEETTEEEEEE
T ss_pred CCHHHHHHHHHHHhccCceeEEeeCCEEEEEE
Confidence 44567889999999999998888777776554
No 25
>1htr_B Gastricsin; aspartyl protease; 1.62A {Homo sapiens} SCOP: b.50.1.2 PDB: 1avf_A
Probab=29.16 E-value=1.6e+02 Score=21.24 Aligned_cols=59 Identities=19% Similarity=0.197 Sum_probs=41.8
Q ss_pred eEEecc--eeeceEEEEcCEEEEee-----------eE--eecC-----CCc-ceeechhHHhhhCceEEeccceEEEEE
Q 039663 12 RIRSEG--HCSKVKFEMQGVEFEVD-----------FH--ILDF-----SGA-NAGLAVQWLEKLGKIVTDHKALTMEFT 70 (102)
Q Consensus 12 ~l~~~~--~~~~v~~~iqg~~F~~d-----------l~--vL~L-----~~~-DvILGmdWL~~~g~i~~D~~~~tm~f~ 70 (102)
.+.|.. ..|.+.+.++|.+|... ++ +.+. .+- ..|||--+|+.+= +..|..++++-|.
T Consensus 248 ~~~C~~~~~~P~i~f~f~g~~~~i~~~~y~~~~~g~C~~~~~~~~~~~~~~~~~~iLG~~fl~~~y-vvfD~~~~~igfa 326 (329)
T 1htr_B 248 LVNCNSIQNLPSLTFIINGVEFPLPPSSYILSNNGYCTVGVEPTYLSSQNGQPLWILGDVFLRSYY-SVYDLGNNRVGFA 326 (329)
T ss_dssp EECGGGGGGSCCEEEEETTEEEEECHHHHEEECSSCEEESEEEECCCCTTSSCEEEECHHHHTTEE-EEEETTTTEEEEE
T ss_pred EEeCCCcccCCcEEEEECCEEEEECHHHhcccCCCEEEEEEEECCCCCCCCCceEEEChHHhccEE-EEEECCCCEEEEE
Confidence 356765 46889999999888643 22 1121 122 5899999999884 5799999999886
Q ss_pred e
Q 039663 71 Y 71 (102)
Q Consensus 71 ~ 71 (102)
.
T Consensus 327 ~ 327 (329)
T 1htr_B 327 T 327 (329)
T ss_dssp E
T ss_pred e
Confidence 4
No 26
>1miq_A Plasmepsin; aspartic proteinase zymogen, domain opening, hydrolase; 2.50A {Plasmodium vivax} SCOP: b.50.1.2 PDB: 1ls5_A*
Probab=28.14 E-value=1.2e+02 Score=22.65 Aligned_cols=59 Identities=10% Similarity=0.189 Sum_probs=40.8
Q ss_pred eEEecc-eeeceEEEEcCEEEEee--------------eEee---cCC--CcceeechhHHhhhCceEEeccceEEEEEe
Q 039663 12 RIRSEG-HCSKVKFEMQGVEFEVD--------------FHIL---DFS--GANAGLAVQWLEKLGKIVTDHKALTMEFTY 71 (102)
Q Consensus 12 ~l~~~~-~~~~v~~~iqg~~F~~d--------------l~vL---~L~--~~DvILGmdWL~~~g~i~~D~~~~tm~f~~ 71 (102)
.+.|.. ..|.+.+.++|.+|... ..++ +.. +-..|||--+|+.+= +..|+.+.++-|..
T Consensus 294 ~~~C~~~~~P~i~f~f~g~~~~l~~~~yi~~~~~~g~~~C~~~~~~~~~~~~~~ILG~~fl~~~y-vvfD~~~~riGfA~ 372 (375)
T 1miq_A 294 VTTCDNKEMPTLEFKSANNTYTLEPEYYMNPILEVDDTLCMITMLPVDIDSNTFILGDPFMRKYF-TVFDYDKESVGFAI 372 (375)
T ss_dssp EEETTCTTCCCEEEECSSCEEEECGGGSEEESSSSSCSEEEESEEECCSSSSEEEECHHHHHHEE-EEEETTTTEEEEEE
T ss_pred EEECCCCCCCcEEEEECCEEEEECHHHhEeeccCCCCCeEEEEEEECCCCCCcEEECHHHhccEE-EEEECCCCEEEEEE
Confidence 456764 56788888888777531 1121 222 135799999999884 57999999999865
No 27
>1lya_B Cathepsin D; lysosomal aspartic protease; HET: NAG BMA MAN; 2.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 1lyb_B* 1lyw_B*
Probab=27.45 E-value=1.5e+02 Score=20.24 Aligned_cols=59 Identities=15% Similarity=0.210 Sum_probs=41.1
Q ss_pred eEEecc--eeeceEEEEcCEEEEee---------------eE--eecC-----CCcceeechhHHhhhCceEEeccceEE
Q 039663 12 RIRSEG--HCSKVKFEMQGVEFEVD---------------FH--ILDF-----SGANAGLAVQWLEKLGKIVTDHKALTM 67 (102)
Q Consensus 12 ~l~~~~--~~~~v~~~iqg~~F~~d---------------l~--vL~L-----~~~DvILGmdWL~~~g~i~~D~~~~tm 67 (102)
.+.|.. ..|.+.+.++|.+|... ++ +.+. .+-..|||--+|+.+= +..|+.++++
T Consensus 157 ~~~C~~~~~~p~i~f~f~g~~~~l~~~~y~~~~~~~~~~~C~~~~~~~~~~~~~~~~~ilG~~fl~~~y-~vfD~~~~~i 235 (241)
T 1lya_B 157 MIPCEKVSTLPAITLKLGGKGYKLSPEDYTLKVSQAGKTLCLSGFMGMDIPPPSGPLWILGDVFIGRYY-TVFDRDNNRV 235 (241)
T ss_dssp EEEGGGGGGSCCEEEEETTEEEEECTTTSEEEETTTTSSEEEESEEECCCCTTTCCCEEECHHHHTTEE-EEEETTTTEE
T ss_pred EEECCCCccCCeEEEEECCEEEEECHHHhEEEccCCCCCeeEEEEEecccCCCCCCeEEechHHhcceE-EEEECCCCEE
Confidence 456764 45788888888877532 22 1122 2346899999999884 5799999999
Q ss_pred EEEe
Q 039663 68 EFTY 71 (102)
Q Consensus 68 ~f~~ 71 (102)
-|..
T Consensus 236 gfA~ 239 (241)
T 1lya_B 236 GFAE 239 (241)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 8864
No 28
>1wkr_A Polyporopepsin; hydrolase, hydrolase-hydrolase inhibitor complex; HET: STA; 1.30A {Irpex lacteus} SCOP: b.50.1.2
Probab=27.23 E-value=1.3e+02 Score=21.88 Aligned_cols=60 Identities=18% Similarity=0.298 Sum_probs=41.0
Q ss_pred eEEec--ceeeceEEEEcCEEEEee--------------------eE--eecCC-----CcceeechhHHhhhCceEEec
Q 039663 12 RIRSE--GHCSKVKFEMQGVEFEVD--------------------FH--ILDFS-----GANAGLAVQWLEKLGKIVTDH 62 (102)
Q Consensus 12 ~l~~~--~~~~~v~~~iqg~~F~~d--------------------l~--vL~L~-----~~DvILGmdWL~~~g~i~~D~ 62 (102)
.+.|. ...|.+.+.++|.+|... ++ +.+++ +...|||--+|+.+= +..|.
T Consensus 244 ~~~C~~~~~~p~i~f~f~g~~~~i~~~~yi~~~~~~~~~g~~~~~c~~~~~~~~~~~~~~~~~iLG~~fl~~~y-~vfD~ 322 (340)
T 1wkr_A 244 RLTTAQYANLQSLFFTIGGQTFELTANAQIWPRNLNTAIGGSASSVYLIVGDLGSDSGEGLDFINGLTFLERFY-SVYDT 322 (340)
T ss_dssp EECHHHHHTCCCEEEEETTEEEEECTGGGBCCGGGGGGGTCCSSCEEBCEEECSSCTTSSCCEEECHHHHTSEE-EEEET
T ss_pred EeeccccccCCcEEEEECCEEEEEcHHHhccccccccccCCCCceEEEEEecCCCCCCCCcceEeChHhhhheE-EEEeC
Confidence 45565 235788889998887631 11 12222 235899999999884 57999
Q ss_pred cceEEEEEeC
Q 039663 63 KALTMEFTYR 72 (102)
Q Consensus 63 ~~~tm~f~~~ 72 (102)
.++++-|...
T Consensus 323 ~~~~igfA~~ 332 (340)
T 1wkr_A 323 TNKRLGLATT 332 (340)
T ss_dssp TTTEEEEEEC
T ss_pred CCCeEEEEec
Confidence 9999998753
No 29
>2qcp_X Cation efflux system protein CUSF; silver-binding, copper-binding, beta barrel, OB-fold, metall metal resistance, metal-binding; 1.00A {Escherichia coli str} PDB: 1zeq_X 3e6z_X
Probab=25.03 E-value=18 Score=21.94 Aligned_cols=19 Identities=26% Similarity=0.382 Sum_probs=15.1
Q ss_pred hhCce-EEeccceEEEEEeC
Q 039663 54 KLGKI-VTDHKALTMEFTYR 72 (102)
Q Consensus 54 ~~g~i-~~D~~~~tm~f~~~ 72 (102)
+|||| .++|-..||.|.-.
T Consensus 27 ~H~pI~~l~wpaMTM~F~v~ 46 (80)
T 2qcp_X 27 HHDPIAAVNWPEMTMRFTIT 46 (80)
T ss_dssp EECCBGGGTBCSEEEEEECC
T ss_pred EcCCcccCCCCceEEEEEcc
Confidence 57776 78899999999754
No 30
>4aa9_A Chymosin; hydrolase, aspartic peptidase, rennet; HET: NAG; 1.60A {Camelus dromedarius} PDB: 4aa8_A 1czi_E* 1cms_A 4cms_A 3cms_A
Probab=24.20 E-value=2e+02 Score=20.51 Aligned_cols=59 Identities=14% Similarity=0.158 Sum_probs=41.7
Q ss_pred eEEecc--eeeceEEEEcCEEEEeee----------EeecC----CCcceeechhHHhhhCceEEeccceEEEEEe
Q 039663 12 RIRSEG--HCSKVKFEMQGVEFEVDF----------HILDF----SGANAGLAVQWLEKLGKIVTDHKALTMEFTY 71 (102)
Q Consensus 12 ~l~~~~--~~~~v~~~iqg~~F~~dl----------~vL~L----~~~DvILGmdWL~~~g~i~~D~~~~tm~f~~ 71 (102)
.+.|.. ..|.+.+.++|.+|.... ..+.+ .+-..|||.-+|+.+= +..|+.++++-|..
T Consensus 244 ~~~C~~~~~~p~i~f~f~g~~~~l~~~~y~~~~~~~C~~~i~~~~~~~~~ilG~~fl~~~y-~vfD~~~~~igfA~ 318 (320)
T 4aa9_A 244 DVNCGNLRSMPTVVFEINGRDYPLSPSAYTSKDQGFCTSGFQGDNNSELWILGDVFIREYY-SVFDRANNRVGLAK 318 (320)
T ss_dssp EECGGGGGGCCCEEEEETTEEEEECHHHHEEEETTEEEESEEEETTCCCEEECHHHHTTEE-EEEETTTTEEEEEE
T ss_pred EEeCCCCCcCceEEEEECCEEEEECHHHhccCCCCeEEEEEEcCCCCCcEEEChHHhcceE-EEEECCCCEEEEEe
Confidence 356765 468889999998876532 11111 1234899999999885 57999999998854
No 31
>2apr_A Rhizopuspepsin; hydrolase (aspartic proteinase); 1.80A {Rhizopus microsporus var} SCOP: b.50.1.2 PDB: 3apr_E* 4apr_E* 5apr_E* 6apr_E* 1uh9_A 1uh8_A 1uh7_A
Probab=22.07 E-value=2.2e+02 Score=20.51 Aligned_cols=60 Identities=15% Similarity=0.135 Sum_probs=40.8
Q ss_pred eEEecce-eeceEEEEcCEEEEee-----------eEee---cCCCcceeechhHHhhhCceEEeccceEEEEEeC
Q 039663 12 RIRSEGH-CSKVKFEMQGVEFEVD-----------FHIL---DFSGANAGLAVQWLEKLGKIVTDHKALTMEFTYR 72 (102)
Q Consensus 12 ~l~~~~~-~~~v~~~iqg~~F~~d-----------l~vL---~L~~~DvILGmdWL~~~g~i~~D~~~~tm~f~~~ 72 (102)
.+.|... .|.+.+.++|.+|... .-++ +..+-..|||--+|+.+= +..|..++++-|...
T Consensus 249 ~~~C~~~~~p~i~f~f~g~~~~ip~~~~~~~~~~~~C~~~i~~~~~~~~iLG~~fl~~~y-~vfD~~~~~igfA~~ 323 (325)
T 2apr_A 249 TISCDTSAFKPLVFSINGASFQVSPDSLVFEEFQGQCIAGFGYGNWGFAIIGDTFLKNNY-VVFNQGVPEVQIAPV 323 (325)
T ss_dssp EECSCGGGCCCEEEEETTEEEEECGGGGEEEEETTEEEESEEEESSSSEEECHHHHTTEE-EEEETTTTEEEEEEB
T ss_pred EEECCCCCCCcEEEEECCEEEEECHHHEEEcCCCCeEEEEEEcCCCCCEEECHHHhcceE-EEEECCCCEEEEEec
Confidence 3467655 6888888887666431 1111 112234899999999885 579999999998754
No 32
>2l55_A SILB,silver efflux protein, MFP component of the components proton antiporter metal...; APO form, AG(I)-binding site; NMR {Cupriavidus metallidurans}
Probab=21.90 E-value=21 Score=21.87 Aligned_cols=19 Identities=32% Similarity=0.338 Sum_probs=15.4
Q ss_pred hhCce-EEeccceEEEEEeC
Q 039663 54 KLGKI-VTDHKALTMEFTYR 72 (102)
Q Consensus 54 ~~g~i-~~D~~~~tm~f~~~ 72 (102)
+|+|| .++|-..||.|...
T Consensus 21 ~H~pI~~l~wPaMTM~F~v~ 40 (82)
T 2l55_A 21 AHEAIPSAQWGAMTMEFAAP 40 (82)
T ss_dssp EECCCTTTTCCCEEEEEECC
T ss_pred ecCCccccCCCceEEEEEcC
Confidence 57877 78999999999753
No 33
>2pma_A Uncharacterized protein; APC86035.2, protein LPG0085, DUF785, legionella pneumophila pneumophila STR. philadelphia 1; 1.89A {Legionella pneumophila subsp} SCOP: b.50.1.3
Probab=20.27 E-value=2.1e+02 Score=19.30 Aligned_cols=46 Identities=4% Similarity=-0.081 Sum_probs=37.5
Q ss_pred eeeceEEEEcCEEEEeeeEeecCC--CcceeechhHHhhhCceEEeccc
Q 039663 18 HCSKVKFEMQGVEFEVDFHILDFS--GANAGLAVQWLEKLGKIVTDHKA 64 (102)
Q Consensus 18 ~~~~v~~~iqg~~F~~dl~vL~L~--~~DvILGmdWL~~~g~i~~D~~~ 64 (102)
..-...+.++|...++.+-+-|=+ .|=|.||=+||+..+ +.+|-..
T Consensus 92 ~VV~~~i~lG~~~~~ie~tLtdRs~m~ypmLLGR~~L~~~~-~lVD~s~ 139 (146)
T 2pma_A 92 PVVLLNIKLGDKVRTIKVNLTNRKRFLYPLLLGRDAIIDFN-GAVDPAL 139 (146)
T ss_dssp EEEEEEEEETTEEEEEEEEEECCCCCSCSEEECHHHHHHTT-EEEETTC
T ss_pred cEEEEEEEECCEEEEEEEEEcCCCcCCCCEEechhHHhhCC-EEECCch
Confidence 445788999999999999998877 588999999998775 4577554
Done!