Query 039665
Match_columns 275
No_of_seqs 394 out of 1978
Neff 8.2
Searched_HMMs 29240
Date Mon Mar 25 20:45:22 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/039665.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/039665hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3fxt_A Nucleoside diphosphate- 99.9 9.1E-28 3.1E-32 181.1 8.9 97 17-113 11-112 (113)
2 3grn_A MUTT related protein; s 99.9 1.6E-21 5.5E-26 156.6 18.0 131 122-258 7-138 (153)
3 3i7u_A AP4A hydrolase; nudix p 99.9 5.1E-22 1.8E-26 156.9 13.2 121 122-255 3-127 (134)
4 2w4e_A MUTT/nudix family prote 99.9 3.1E-22 1.1E-26 159.8 10.5 117 122-240 4-120 (145)
5 3gwy_A Putative CTP pyrophosph 99.9 4.7E-21 1.6E-25 151.6 17.0 125 123-255 6-131 (140)
6 3h95_A Nucleoside diphosphate- 99.9 2.8E-21 9.7E-26 162.4 15.5 137 114-255 17-156 (199)
7 1vcd_A NDX1; nudix protein, di 99.9 4.5E-21 1.5E-25 148.6 15.3 121 124-256 3-123 (126)
8 3hhj_A Mutator MUTT protein; n 99.9 2.3E-21 7.7E-26 156.6 14.2 136 112-255 18-155 (158)
9 1v8y_A ADP-ribose pyrophosphat 99.9 2E-21 6.8E-26 159.1 13.6 115 122-240 33-147 (170)
10 3ees_A Probable pyrophosphohyd 99.9 3.6E-21 1.2E-25 153.8 14.7 129 123-259 21-149 (153)
11 4dyw_A MUTT/nudix family prote 99.9 3E-21 1E-25 156.1 13.8 122 112-237 18-141 (157)
12 3r03_A Nudix hydrolase; struct 99.9 7.2E-21 2.5E-25 150.8 14.6 128 123-258 8-137 (144)
13 3gg6_A Nudix motif 18, nucleos 99.9 6.1E-21 2.1E-25 153.6 14.3 129 122-258 19-148 (156)
14 2rrk_A ORF135, CTP pyrophospho 99.9 1.4E-20 4.9E-25 148.2 15.2 122 126-255 11-132 (140)
15 1rya_A GDP-mannose mannosyl hy 99.9 3.1E-21 1.1E-25 155.6 11.5 116 122-241 17-142 (160)
16 2fkb_A Putative nudix hydrolas 99.9 3.2E-20 1.1E-24 153.0 17.5 131 124-258 38-169 (180)
17 3u53_A BIS(5'-nucleosyl)-tetra 99.9 9.8E-21 3.3E-25 152.6 13.8 110 125-239 5-127 (155)
18 2pbt_A AP4A hydrolase; nudix p 99.8 1E-20 3.4E-25 148.0 13.3 122 123-257 4-129 (134)
19 1ktg_A Diadenosine tetraphosph 99.8 1.5E-20 5E-25 147.9 14.2 126 123-257 3-135 (138)
20 3exq_A Nudix family hydrolase; 99.8 1.6E-20 5.6E-25 152.3 14.9 128 121-255 8-136 (161)
21 3id9_A MUTT/nudix family prote 99.8 2.1E-20 7.2E-25 152.8 15.4 135 122-265 22-159 (171)
22 1f3y_A Diadenosine 5',5'''-P1, 99.8 8E-21 2.7E-25 153.6 12.5 130 122-255 13-163 (165)
23 2yvp_A NDX2, MUTT/nudix family 99.8 1.1E-21 3.8E-26 162.2 7.6 119 122-241 40-158 (182)
24 1mk1_A ADPR pyrophosphatase; n 99.8 2.2E-21 7.6E-26 164.2 9.2 153 63-241 4-162 (207)
25 2b0v_A Nudix hydrolase; struct 99.8 5.1E-20 1.8E-24 147.3 16.0 130 123-256 8-139 (153)
26 2fb1_A Conserved hypothetical 99.8 9.3E-21 3.2E-25 162.6 12.3 137 116-257 6-147 (226)
27 3oga_A Nucleoside triphosphata 99.8 4.7E-20 1.6E-24 149.9 15.7 118 124-242 28-154 (165)
28 1vhz_A ADP compounds hydrolase 99.8 2.1E-20 7.3E-25 157.2 13.8 115 124-241 50-164 (198)
29 2kdv_A RNA pyrophosphohydrolas 99.8 6.1E-20 2.1E-24 149.7 16.2 132 121-257 6-155 (164)
30 1sjy_A MUTT/nudix family prote 99.8 3.2E-20 1.1E-24 149.5 14.3 119 121-241 11-134 (159)
31 3son_A Hypothetical nudix hydr 99.8 2.7E-20 9.4E-25 148.6 13.3 125 124-257 6-141 (149)
32 2yyh_A MUTT domain, 8-OXO-DGTP 99.8 7.8E-20 2.7E-24 144.3 15.2 113 120-240 6-126 (139)
33 3eds_A MUTT/nudix family prote 99.8 3.8E-21 1.3E-25 154.7 7.6 114 121-242 19-140 (153)
34 3q1p_A Phosphohydrolase (MUTT/ 99.8 5.4E-20 1.9E-24 155.4 14.9 127 120-258 65-196 (205)
35 3shd_A Phosphatase NUDJ; nudix 99.8 2.2E-19 7.6E-24 143.8 17.6 130 122-257 4-134 (153)
36 1nqz_A COA pyrophosphatase (MU 99.8 4.3E-20 1.5E-24 154.3 13.5 117 121-238 32-152 (194)
37 3i9x_A MUTT/nudix family prote 99.8 2.7E-20 9.2E-25 154.8 12.0 131 124-257 28-172 (187)
38 1g0s_A Hypothetical 23.7 kDa p 99.8 3.8E-20 1.3E-24 156.9 12.9 118 123-240 57-182 (209)
39 3cng_A Nudix hydrolase; struct 99.8 1.2E-19 4.1E-24 151.2 15.6 113 121-241 38-152 (189)
40 3f6a_A Hydrolase, nudix family 99.8 1E-19 3.5E-24 147.0 14.3 124 123-256 6-150 (159)
41 2o1c_A DATP pyrophosphohydrola 99.8 1.5E-19 5.2E-24 143.7 14.4 124 123-256 9-148 (150)
42 3q93_A 7,8-dihydro-8-oxoguanin 99.8 1.9E-19 6.5E-24 148.4 15.2 126 121-256 23-150 (176)
43 2dsc_A ADP-sugar pyrophosphata 99.8 5.1E-20 1.8E-24 156.3 10.0 104 135-239 77-185 (212)
44 1vk6_A NADH pyrophosphatase; 1 99.8 3.6E-19 1.2E-23 156.3 15.8 130 121-260 138-267 (269)
45 3fcm_A Hydrolase, nudix family 99.8 4.4E-19 1.5E-23 148.7 15.6 131 123-262 45-189 (197)
46 3gz5_A MUTT/nudix family prote 99.8 1.3E-19 4.5E-24 156.8 12.4 134 121-258 20-161 (240)
47 1q27_A Putative nudix hydrolas 99.8 2.1E-19 7.2E-24 146.8 12.9 112 123-237 34-148 (171)
48 2azw_A MUTT/nudix family prote 99.8 3.3E-19 1.1E-23 141.7 13.1 122 121-254 16-144 (148)
49 2pqv_A MUTT/nudix family prote 99.8 1.6E-19 5.4E-24 145.0 11.3 119 123-251 19-141 (154)
50 3o8s_A Nudix hydrolase, ADP-ri 99.8 2.4E-19 8.1E-24 151.6 12.9 128 119-259 66-198 (206)
51 3q91_A Uridine diphosphate glu 99.8 8.3E-20 2.8E-24 155.8 10.1 118 122-239 35-190 (218)
52 1x51_A A/G-specific adenine DN 99.8 4.1E-19 1.4E-23 142.9 13.4 127 122-256 18-149 (155)
53 1mut_A MUTT, nucleoside tripho 99.8 2.5E-20 8.4E-25 144.7 5.8 110 128-242 9-118 (129)
54 3o6z_A GDP-mannose pyrophospha 99.8 1.7E-19 5.9E-24 150.7 11.2 115 124-240 46-169 (191)
55 2a6t_A SPAC19A8.12; alpha/beta 99.8 1.2E-20 3.9E-25 166.2 4.1 195 28-241 11-216 (271)
56 2b06_A MUTT/nudix family prote 99.8 8.4E-19 2.9E-23 140.7 14.2 125 122-257 7-136 (155)
57 2jvb_A Protein PSU1, mRNA-deca 99.8 1.3E-19 4.4E-24 144.1 8.8 126 125-256 6-135 (146)
58 1hzt_A Isopentenyl diphosphate 99.8 1.6E-19 5.4E-24 150.4 9.4 130 125-257 34-173 (190)
59 2fvv_A Diphosphoinositol polyp 99.8 4.3E-19 1.5E-23 148.8 11.3 111 123-239 40-152 (194)
60 3fk9_A Mutator MUTT protein; s 99.8 1.8E-18 6.2E-23 144.1 14.7 121 125-257 6-131 (188)
61 1k2e_A Nudix homolog; nudix/MU 99.8 4.6E-19 1.6E-23 142.9 10.4 104 124-242 2-124 (156)
62 3f13_A Putative nudix hydrolas 99.8 4.3E-18 1.5E-22 138.7 14.1 115 124-256 16-130 (163)
63 3e57_A Uncharacterized protein 99.8 1.5E-18 5.1E-23 146.7 8.4 108 126-237 70-188 (211)
64 2fml_A MUTT/nudix family prote 99.7 5E-17 1.7E-21 143.1 17.1 113 117-234 33-154 (273)
65 2qjo_A Bifunctional NMN adenyl 99.7 2.6E-17 9.1E-22 148.6 15.6 129 120-254 200-338 (341)
66 2qjt_B Nicotinamide-nucleotide 99.7 4.7E-17 1.6E-21 147.7 16.5 133 119-257 204-348 (352)
67 3fsp_A A/G-specific adenine gl 99.7 4.1E-17 1.4E-21 149.6 13.3 124 122-257 239-362 (369)
68 3fjy_A Probable MUTT1 protein; 99.7 1.1E-16 3.9E-21 146.3 14.8 105 133-242 36-163 (364)
69 2dho_A Isopentenyl-diphosphate 99.7 1.8E-16 6.1E-21 136.6 14.5 111 124-237 60-190 (235)
70 2pny_A Isopentenyl-diphosphate 99.7 1.8E-16 6.3E-21 137.4 13.0 110 125-237 72-201 (246)
71 1u20_A U8 snoRNA-binding prote 99.6 3.4E-16 1.2E-20 132.8 6.3 105 126-237 47-165 (212)
72 3dup_A MUTT/nudix family prote 99.5 6.7E-14 2.3E-18 124.2 13.0 115 124-239 119-244 (300)
73 1q33_A Pyrophosphatase, ADP-ri 99.5 1.5E-13 5.2E-18 121.9 15.4 114 136-259 140-279 (292)
74 3qsj_A Nudix hydrolase; struct 99.5 4.9E-13 1.7E-17 114.7 13.3 113 122-235 7-186 (232)
75 2xsq_A U8 snoRNA-decapping enz 99.4 1.2E-13 4E-18 117.5 5.7 94 136-235 66-171 (217)
76 3rh7_A Hypothetical oxidoreduc 99.4 2.9E-12 1E-16 114.9 13.0 116 122-261 182-298 (321)
77 3kvh_A Protein syndesmos; NUDT 99.1 2.1E-10 7.3E-15 94.1 7.1 92 137-235 46-147 (214)
78 3bho_A Cleavage and polyadenyl 99.0 2.6E-09 8.8E-14 88.6 11.8 104 124-236 59-184 (208)
79 3t3l_A Frataxin, mitochondrial 28.0 89 0.003 23.4 4.8 53 128-184 61-119 (129)
80 1ew4_A CYAY protein; friedreic 22.7 1.1E+02 0.0036 22.1 4.2 32 152-183 70-104 (106)
81 2lic_A Vitellogenin; lipid tra 22.5 41 0.0014 18.4 1.4 7 6-12 14-20 (35)
No 1
>3fxt_A Nucleoside diphosphate-linked moiety X motif 6; nudix, NUDT6, GFG, FGF2AS, antisense basic fibroblast growth FGF-2 regulation, hydrolase; 2.30A {Homo sapiens}
Probab=99.95 E-value=9.1e-28 Score=181.06 Aligned_cols=97 Identities=30% Similarity=0.585 Sum_probs=81.8
Q ss_pred hcCCCCCCCcCcccceeecccCCcEEEeCC-----CCCChHHHHHHHHHHHHHHHHhCCeeEEEEccccccccchHHHhc
Q 039665 17 QNMMPEDGVRCPELLTAVGDLHGGVTVDMK-----KPMDSKVFSSRLRASLSLWRQQGKRGVWIKLPIELANLVEPAVQE 91 (275)
Q Consensus 17 ~~~~~~~~~~~~~~~~~~~d~~~g~~v~~~-----~~~~~~~f~~~l~~~l~~w~~~~~~~vW~~~~~~~~~l~~~~~~~ 91 (275)
.+.-.|+.++++.+|+|+.||||||+|++. .+.|+++|...|+.||.+||.+|+++|||+||+.++++++++++.
T Consensus 11 ~~~~~~~~~~~~~~l~g~~DrygGV~Vd~~~l~~~~~~d~~~F~~~L~~SL~~Wr~~gk~~IWlklpi~~s~lIp~a~~~ 90 (113)
T 3fxt_A 11 VDLGTENLYFQSMDLQGELDRFGGISVRLARLDALDRLDAAAFQKGLQAAVQQWRSEGRTAVWLHIPILQSRFIAPAASL 90 (113)
T ss_dssp ----------CCCCCCCEECTTSCEEEEHHHHTTTSCBCHHHHHHHHHHHHHHHHHTTCCEEEEEEEGGGGGGHHHHHHT
T ss_pred ccccccccccccccccCCccCcCCEEEeCCccCCcCcCCHHHHHHHHHHHHHHHHHcCCeeEEEEcCHHHhhhHHHHHHc
Confidence 345568889999999999999999999974 344999999999999999999999999999999999999999999
Q ss_pred CceeccCCCCeeeEEeecCCCc
Q 039665 92 GFRYHHAEPDYLMLVYWIPETA 113 (275)
Q Consensus 92 gf~~~~~~~~~~~l~~wl~~~~ 113 (275)
||.||||++||+||++|||+.+
T Consensus 91 GF~fHHAe~dylmL~~WLpe~p 112 (113)
T 3fxt_A 91 GFCFHHAESDSSTLTLWLREGP 112 (113)
T ss_dssp TCEEEEEEBTEEEEEEECCC--
T ss_pred CceeecCCCCeEEEEEecCcCC
Confidence 9999999999999999999875
No 2
>3grn_A MUTT related protein; structural genomics, hydrolase, PSI-2, protein structure INI NEW YORK SGX research center for structural genomics; 1.70A {Methanosarcina mazei}
Probab=99.88 E-value=1.6e-21 Score=156.63 Aligned_cols=131 Identities=19% Similarity=0.237 Sum_probs=103.0
Q ss_pred ceeEEEEEEEeCCceEEEEEEecCCCCCCCceeCcceeccCCCCHHHHHHHHHHHHhCCCcceeEEEEEEeeeccccceE
Q 039665 122 HRVGVGAFVMNNKRELLVVQENNGALKGTGVWKLPTGTIEEGEDICAAAVREVKEETGIDTEFVEVLAFRQSHRSFFRKS 201 (275)
Q Consensus 122 ~~v~v~~vv~~~~~~vLLv~r~~~~~~~~~~w~lPgG~ve~gEs~~~aA~REl~EEtGl~~~~~~~l~~~~~~~~~~~~~ 201 (275)
..++|++++++.+++|||++|.+.....++.|.||||++++||++.+||+||++||||+.+....+++............
T Consensus 7 ~~~~v~~vi~~~~~~vLL~~r~~~~~~~~g~w~~PgG~ve~gE~~~~aa~REl~EE~Gl~~~~~~~~~~~~~~~~~~~~~ 86 (153)
T 3grn_A 7 YIISVYALIRNEKGEFLLLRRSENSRTNAGKWDLPGGKVNPDESLKEGVAREVWEETGITMVPGDIAGQVNFELTEKKVI 86 (153)
T ss_dssp EEEEEEEEEECTTCCEEEEEECTTCSSSTTCEECSEEECCTTCCHHHHHHHHHHHHHCCCCCCCSEEEEEEEECSSCEEE
T ss_pred eEEEEEEEEEcCCCcEEEEEEcCCCCCCCCeEECceeecCCCCCHHHHHHhhhhhhhCcEeecceEEEEEEEecCCceEE
Confidence 46778889999889999999987534478999999999999999999999999999999999888888877666655555
Q ss_pred EEEEEEEEecCCccccCCccccceEEEEeHhhHhcCC-CcccchHHHHHHHHHHhhcc
Q 039665 202 DLFFVCMLRPRNFHIQKQDSEIAAAQWMQAEDYAAQP-YVLKHQMFNYICQICLTKSE 258 (275)
Q Consensus 202 ~~~f~~~~~~~~~~~~~~~~E~~~~~Wv~~eel~~~~-~~~~~~~~~~~~~~~~~~~~ 258 (275)
.++|.|... .+.+.. ..|..+++|++++++.+++ ++. .++.+++.+.+...
T Consensus 87 ~~~~~~~~~--~~~~~~-~~e~~~~~W~~~~el~~~~~~~~---~~~~~l~~l~~~~~ 138 (153)
T 3grn_A 87 AIVFDGGYV--VADVKL-SYEHIEYSWVSLEKILGMETLPA---YFRDFFERFDRENK 138 (153)
T ss_dssp EEEEEEEEC--CCCCCC-CTTEEEEEEECHHHHTTCSSSCH---HHHHHHHHHHHHHT
T ss_pred EEEEEEEec--CCcEec-CCCcceEEEEEHHHhhhcccchH---HHHHHHHHHhcccc
Confidence 666666543 233332 4788899999999999987 544 45666666665443
No 3
>3i7u_A AP4A hydrolase; nudix protein, diadenosine polyphosphate, S genomics, NPPSFA, national project on protein structural AN functional analyses; HET: PGE PG4; 1.80A {Aquifex aeolicus} PDB: 3i7v_A*
Probab=99.88 E-value=5.1e-22 Score=156.85 Aligned_cols=121 Identities=21% Similarity=0.328 Sum_probs=88.1
Q ss_pred ceeEEEEEEEeCCceEEEEEEecCCCCCCCceeCcceeccCCCCHHHHHHHHHHHHhCCCcceeEEEEEEeeeccccc--
Q 039665 122 HRVGVGAFVMNNKRELLVVQENNGALKGTGVWKLPTGTIEEGEDICAAAVREVKEETGIDTEFVEVLAFRQSHRSFFR-- 199 (275)
Q Consensus 122 ~~v~v~~vv~~~~~~vLLv~r~~~~~~~~~~w~lPgG~ve~gEs~~~aA~REl~EEtGl~~~~~~~l~~~~~~~~~~~-- 199 (275)
..+++++||++ +++|||++|. .|.|.||||++|+|||+.+||+||++||||+.+....+++.....+...+
T Consensus 3 ~~~aag~vv~~-~~~vLL~~r~------~g~W~~PgG~ve~gEt~~~aa~RE~~EEtGl~~~~~~~l~~~~~~~~~~~~~ 75 (134)
T 3i7u_A 3 KEFSAGGVLFK-DGEVLLIKTP------SNVWSFPKGNIEPGEKPEETAVREVWEETGVKGEILDYIGEIHYWYTLKGER 75 (134)
T ss_dssp EEEEEEEEEEE-TTEEEEEECT------TSCEECCEEECCTTCCHHHHHHHHHHHHHSEEEEEEEEEEEEEEEEEETTEE
T ss_pred cEEEEEEEEEE-CCEEEEEEeC------CCcEECCeeEecCCCCHHHHHHHHHHHhcCceEEEeeeeeeeeEEecCCCce
Confidence 34678888887 5799999875 36799999999999999999999999999999988888876544333222
Q ss_pred --eEEEEEEEEEecCCccccCCccccceEEEEeHhhHhcCCCcccchHHHHHHHHHHh
Q 039665 200 --KSDLFFVCMLRPRNFHIQKQDSEIAAAQWMQAEDYAAQPYVLKHQMFNYICQICLT 255 (275)
Q Consensus 200 --~~~~~f~~~~~~~~~~~~~~~~E~~~~~Wv~~eel~~~~~~~~~~~~~~~~~~~~~ 255 (275)
...++|+|.... +.+. .++|+.+++|++++|+.++..... .+.+++.++.
T Consensus 76 ~~~~~~~f~~~~~~--~~~~-~~~E~~~~~W~~~~e~~~~l~~~~---~r~il~~a~~ 127 (134)
T 3i7u_A 76 IFKTVKYYLMKYKE--GEPR-PSWEVKDAKFFPIKEAKKLLKYKG---DKEIFEKALK 127 (134)
T ss_dssp EEEEEEEEEEEEEE--ECCC-CCTTSSEEEEEEHHHHHHHBCSHH---HHHHHHHHHH
T ss_pred EEEEEEEEEEEEcC--CcCc-CChhheEEEEEEHHHHhhhcCChH---HHHHHHHHHH
Confidence 334567775543 3333 346899999999999988754332 3344444443
No 4
>2w4e_A MUTT/nudix family protein; ADP-ribose pyrophosphatase, hydrolase; 2.00A {Deinococcus radiodurans}
Probab=99.87 E-value=3.1e-22 Score=159.82 Aligned_cols=117 Identities=18% Similarity=0.075 Sum_probs=85.4
Q ss_pred ceeEEEEEEEeCCceEEEEEEecCCCCCCCceeCcceeccCCCCHHHHHHHHHHHHhCCCcceeEEEEEEeeeccccceE
Q 039665 122 HRVGVGAFVMNNKRELLVVQENNGALKGTGVWKLPTGTIEEGEDICAAAVREVKEETGIDTEFVEVLAFRQSHRSFFRKS 201 (275)
Q Consensus 122 ~~v~v~~vv~~~~~~vLLv~r~~~~~~~~~~w~lPgG~ve~gEs~~~aA~REl~EEtGl~~~~~~~l~~~~~~~~~~~~~ 201 (275)
+..+|++++++.++++||+++++.+. +++.|+||||++|+||++.+||+||++||||+.+..+..++.+..........
T Consensus 4 ~~~~v~vi~~~~~~~vLLv~~~r~~~-~~~~w~~PgG~ve~gEt~~~aa~REl~EEtGl~~~~~~~l~~~~~~~~~~~~~ 82 (145)
T 2w4e_A 4 GPRAVFILPVTAQGEAVLIRQFRYPL-RATITEIVAGGVEKGEDLGAAAARELLEEVGGAASEWVPLPGFYPQPSISGVV 82 (145)
T ss_dssp CCEEEEEEEEETTSEEEEEEEEETTT-TEEEEECEEEECCTTCCHHHHHHHHHHHHHCEECSEEEECCCBBSCTTTCCCE
T ss_pred eCCEEEEEEEcCCCEEEEEEEEecCC-CCCEEEeCCccCCCCCCHHHHHHHHHHHhhCCccCeEEEEecCcCCCCccCce
Confidence 34578889999899999998876542 45699999999999999999999999999999998877776554444444455
Q ss_pred EEEEEEEEecCCccccCCccccceEEEEeHhhHhcCCCc
Q 039665 202 DLFFVCMLRPRNFHIQKQDSEIAAAQWMQAEDYAAQPYV 240 (275)
Q Consensus 202 ~~~f~~~~~~~~~~~~~~~~E~~~~~Wv~~eel~~~~~~ 240 (275)
.++|++.... ......+++|+.+++|++++++.++...
T Consensus 83 ~~~f~~~~~~-~~~~~~~~~E~~~~~w~~~~el~~~~~~ 120 (145)
T 2w4e_A 83 FYPLLALGVT-LGAAQLEDTETIERVVLPLAEVYRMLEA 120 (145)
T ss_dssp EEEEEEEEEE-EC--------CEEEEEEEHHHHHHHHHH
T ss_pred EEEEEEEecc-cCCCCCCCCCeEEEEEEeHHHHHHHHHc
Confidence 6777775322 1234456788999999999999887443
No 5
>3gwy_A Putative CTP pyrophosphohydrolase; structural genomics, PSI-2, protein structure INI NEW YORK SGX research center for structural genomics; 2.00A {Bacteroides fragilis} SCOP: d.113.1.0
Probab=99.87 E-value=4.7e-21 Score=151.63 Aligned_cols=125 Identities=23% Similarity=0.211 Sum_probs=93.8
Q ss_pred eeEEEEEEEeCCceEEEEEEecCCCC-CCCceeCcceeccCCCCHHHHHHHHHHHHhCCCcceeEEEEEEeeeccccceE
Q 039665 123 RVGVGAFVMNNKRELLVVQENNGALK-GTGVWKLPTGTIEEGEDICAAAVREVKEETGIDTEFVEVLAFRQSHRSFFRKS 201 (275)
Q Consensus 123 ~v~v~~vv~~~~~~vLLv~r~~~~~~-~~~~w~lPgG~ve~gEs~~~aA~REl~EEtGl~~~~~~~l~~~~~~~~~~~~~ 201 (275)
...|++++.+ +++|||+||.+.+.. .+|.|.||||++++||++.+||+||++||||+.+.....++.+..........
T Consensus 6 ~~~v~~vi~~-~~~vLL~~r~~~~~~~~~g~w~lPgG~ve~gE~~~~aa~REl~EE~Gl~~~~~~~~~~~~~~~~~~~~~ 84 (140)
T 3gwy_A 6 IEVVAAVIRL-GEKYLCVQRGQTKFSYTSFRYEFPGGKVEEGESLQEALQREIMEEMDYVIEVGEKLLTVHHTYPDFEIT 84 (140)
T ss_dssp EEEEEEEEEE-TTEEEEEEC---------CCEECSEEECCTTCCHHHHHHHHHHHHHCCCEEEEEEEEEEECCCSSCCEE
T ss_pred EEEEEEEEEe-CCEEEEEEecCCCCCCCCCeEECCCccCCCCCCHHHHHHHHHHHhhCcEEEeceEEEEEEEEeCCceEE
Confidence 3456667777 789999999865421 57899999999999999999999999999999999999998877666666667
Q ss_pred EEEEEEEEecCCccccCCccccceEEEEeHhhHhcCCCcccchHHHHHHHHHHh
Q 039665 202 DLFFVCMLRPRNFHIQKQDSEIAAAQWMQAEDYAAQPYVLKHQMFNYICQICLT 255 (275)
Q Consensus 202 ~~~f~~~~~~~~~~~~~~~~E~~~~~Wv~~eel~~~~~~~~~~~~~~~~~~~~~ 255 (275)
.++|.|.... .. +...|..+++|++++++.++++... .+.+++.+.+
T Consensus 85 ~~~f~~~~~~--~~--~~~~E~~~~~W~~~~el~~~~~~~~---~~~il~~~~~ 131 (140)
T 3gwy_A 85 MHAFLCHPVG--QR--YVLKEHIAAQWLSTREMAILDWAEA---DKPIVRKISE 131 (140)
T ss_dssp EEEEEEEECC--SC--CCCCSSCEEEEECHHHHTTSCBCGG---GHHHHHHHHC
T ss_pred EEEEEEEecC--Cc--ccccccceeEeccHHHHhhCCCCcc---cHHHHHHHHh
Confidence 7778776543 22 2356889999999999999988765 3455555443
No 6
>3h95_A Nucleoside diphosphate-linked moiety X motif 6; NUDT6, nudix, hydrolase, GFG, GFG-1, FGF2AS, structural GENO structural genomics consortium, SGC; HET: FLC; 1.70A {Homo sapiens}
Probab=99.87 E-value=2.8e-21 Score=162.40 Aligned_cols=137 Identities=38% Similarity=0.623 Sum_probs=96.7
Q ss_pred CCCCCCCcceeEEEEEEEeC-CceEEEEEEecCCCCCCCceeCcceeccCCCCHHHHHHHHHHHHhCCCcceeEEEEEEe
Q 039665 114 DVLPANASHRVGVGAFVMNN-KRELLVVQENNGALKGTGVWKLPTGTIEEGEDICAAAVREVKEETGIDTEFVEVLAFRQ 192 (275)
Q Consensus 114 ~~~p~~~~~~v~v~~vv~~~-~~~vLLv~r~~~~~~~~~~w~lPgG~ve~gEs~~~aA~REl~EEtGl~~~~~~~l~~~~ 192 (275)
+.++.+.+++++|++++++. +++|||+|++.. .++.|.||||++++||++.+||+||++||||+.+....++++..
T Consensus 17 ~~~~~~~~~~v~v~~~v~~~~~~~vLL~~r~~~---~~g~w~lPGG~ve~gEs~~~aA~REl~EEtGl~~~~~~l~~~~~ 93 (199)
T 3h95_A 17 NLYFQSMSHQVGVAGAVFDESTRKILVVQDRNK---LKNMWKFPGGLSEPEEDIGDTAVREVFEETGIKSEFRSVLSIRQ 93 (199)
T ss_dssp ---------CCEEEEEEEETTTTEEEEEEESSS---STTSBBCCEEECCTTCCHHHHHHHHHHHHHCCCEEEEEEEEEEE
T ss_pred ccccccCcccceEEEEEEeCCCCEEEEEEEcCC---CCCCEECCccccCCCCCHHHHHHHHHHHHhCCccccceEEEEEe
Confidence 34455668889999999985 589999998642 46899999999999999999999999999999998888877543
Q ss_pred ee--ccccceEEEEEEEEEecCCccccCCccccceEEEEeHhhHhcCCCcccchHHHHHHHHHHh
Q 039665 193 SH--RSFFRKSDLFFVCMLRPRNFHIQKQDSEIAAAQWMQAEDYAAQPYVLKHQMFNYICQICLT 255 (275)
Q Consensus 193 ~~--~~~~~~~~~~f~~~~~~~~~~~~~~~~E~~~~~Wv~~eel~~~~~~~~~~~~~~~~~~~~~ 255 (275)
.. ........++|+|.+......+.++++|+.+++|++++++.++... .++...++..++.
T Consensus 94 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~~~W~~~~el~~~~~~--~~~~~~~~~~~~~ 156 (199)
T 3h95_A 94 QHTNPGAFGKSDMYIICRLKPYSFTINFCQEECLRCEWMDLNDLAKTENT--TPITSRVARLLLY 156 (199)
T ss_dssp CC---------CEEEEEEEEESCCCCCCCTTTEEEEEEEEHHHHHHCSSB--CHHHHHHHHHHHH
T ss_pred eecCCCCceeEEEEEEEEEcCCCcccCCCccceeeeEEEeHHHHhhhhhc--ChHHHHHHHHHHh
Confidence 22 2223445567777776655566667889999999999999988643 3355555555544
No 7
>1vcd_A NDX1; nudix protein, diadenosine polyphosphate, AP6A, thermus THER HB8, hydrolase, riken structural genomics/proteomics initia RSGI; 1.70A {Thermus thermophilus} SCOP: d.113.1.1 PDB: 1vc8_A 1vc9_A*
Probab=99.87 E-value=4.5e-21 Score=148.58 Aligned_cols=121 Identities=27% Similarity=0.409 Sum_probs=94.1
Q ss_pred eEEEEEEEeCCceEEEEEEecCCCCCCCceeCcceeccCCCCHHHHHHHHHHHHhCCCcceeEEEEEEeeeccccceEEE
Q 039665 124 VGVGAFVMNNKRELLVVQENNGALKGTGVWKLPTGTIEEGEDICAAAVREVKEETGIDTEFVEVLAFRQSHRSFFRKSDL 203 (275)
Q Consensus 124 v~v~~vv~~~~~~vLLv~r~~~~~~~~~~w~lPgG~ve~gEs~~~aA~REl~EEtGl~~~~~~~l~~~~~~~~~~~~~~~ 203 (275)
+++++++++.+++|||+||.+ |.|.||||++++||++.+||+||++||||+.+.....++.............+
T Consensus 3 ~~~~~vi~~~~~~vLl~~r~~------g~w~~PgG~ve~gE~~~~aa~RE~~EE~Gl~~~~~~~~~~~~~~~~~~~~~~~ 76 (126)
T 1vcd_A 3 LGAGGVVFNAKREVLLLRDRM------GFWVFPKGHPEPGESLEEAAVREVWEETGVRAEVLLPLYPTRYVNPKGVEREV 76 (126)
T ss_dssp EEEEEEEECTTSCEEEEECTT------SCEECCEECCCTTCCHHHHHHHHHHHHHCCEEEEEEEEEEEEEECTTSCEEEE
T ss_pred eEEEEEEEcCCCEEEEEEECC------CCccCCcCcCCCCCCHHHHHHHHHHHhhCcEeeeccEEeEEEEecCCceEEEE
Confidence 578899999889999999863 68999999999999999999999999999999988888877655544455566
Q ss_pred EEEEEEecCCccccCCccccceEEEEeHhhHhcCCCcccchHHHHHHHHHHhh
Q 039665 204 FFVCMLRPRNFHIQKQDSEIAAAQWMQAEDYAAQPYVLKHQMFNYICQICLTK 256 (275)
Q Consensus 204 ~f~~~~~~~~~~~~~~~~E~~~~~Wv~~eel~~~~~~~~~~~~~~~~~~~~~~ 256 (275)
+|+|...... ..++.|+.+++|++++++.++..... .+.+++.+++.
T Consensus 77 ~~~~~~~~~~---~~~~~e~~~~~w~~~~el~~~~~~~~---~~~~l~~~~~~ 123 (126)
T 1vcd_A 77 HWFLMRGEGA---PRLEEGMTGAGWFSPEEARALLAFPE---DLGLLEVALER 123 (126)
T ss_dssp EEEEEEEESC---CCCCTTCCEEEEECHHHHHHHBCSHH---HHHHHHHHHHH
T ss_pred EEEEEEcCCC---CCCCcceeeeEEcCHHHHHHhhcChh---HHHHHHHHHHh
Confidence 7777554322 23567889999999999998755433 44555555543
No 8
>3hhj_A Mutator MUTT protein; niaid, ssgcid, decode, UW, SBRI, infectious diseases, hydrol structural genomics; 2.10A {Bartonella henselae}
Probab=99.87 E-value=2.3e-21 Score=156.57 Aligned_cols=136 Identities=21% Similarity=0.354 Sum_probs=95.3
Q ss_pred CcCCCCCCCcceeEEEEEEEeCCceEEEEEEecCCCCCCCceeCcceeccCCCCHHHHHHHHHHHHhCCCcceeEE--EE
Q 039665 112 TADVLPANASHRVGVGAFVMNNKRELLVVQENNGALKGTGVWKLPTGTIEEGEDICAAAVREVKEETGIDTEFVEV--LA 189 (275)
Q Consensus 112 ~~~~~p~~~~~~v~v~~vv~~~~~~vLLv~r~~~~~~~~~~w~lPgG~ve~gEs~~~aA~REl~EEtGl~~~~~~~--l~ 189 (275)
++.+++........+++++++.+++|||++|...+. ++|.|.||||++++||++.+||+||++||||+.+....+ ++
T Consensus 18 gP~~~~~~~~~~~~~~~~i~~~~~~vLL~~r~~~~~-~~g~w~~PgG~ve~gE~~~~aa~RE~~EEtGl~~~~~~~~~~~ 96 (158)
T 3hhj_A 18 GPGSMPIKSSLLIVVACALLDQDNRVLLTQRPEGKS-LAGLWEFPGGKVEQGETPEASLIRELEEELGVHVQADNLFPLT 96 (158)
T ss_dssp ---------CEEEEEEEEEBCTTSEEEEEECCCTTS-CCCCCBCCEEECCTTCCHHHHHHHHHHHHHCCBCCGGGCEEEE
T ss_pred CCccCCCCCceEEEEEEEEEeCCCEEEEEEeCCCCC-CCCEEECCceeecCCCCHHHHHHHHHHHHhCcEeecceEEEEE
Confidence 333444444555667778888889999999986544 689999999999999999999999999999999877644 55
Q ss_pred EEeeeccccceEEEEEEEEEecCCccccCCccccceEEEEeHhhHhcCCCcccchHHHHHHHHHHh
Q 039665 190 FRQSHRSFFRKSDLFFVCMLRPRNFHIQKQDSEIAAAQWMQAEDYAAQPYVLKHQMFNYICQICLT 255 (275)
Q Consensus 190 ~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~E~~~~~Wv~~eel~~~~~~~~~~~~~~~~~~~~~ 255 (275)
.............++|.|... .. .....|..+++|++++++.++++... .+.+++.+.+
T Consensus 97 ~~~~~~~~~~~~~~~~~~~~~--~~--~~~~~e~~~~~W~~~~el~~~~~~~~---~~~il~~~~~ 155 (158)
T 3hhj_A 97 FASHGYETFHLLMPLYFCSHY--KG--VAQGREGQNLKWIFINDLDKYPMPEA---DKPLVQVLKN 155 (158)
T ss_dssp EEEEECSSCEEEEEEEEESCC--BS--CCCCTTSCEEEEEEGGGGGGSCCCTT---THHHHHHHHH
T ss_pred EEeeccCCcEEEEEEEEEEEC--CC--ccCCccccceEEEcHHHHhhCCCCcc---hHHHHHHHHH
Confidence 454555554555556666332 22 23467888999999999999988665 3455555444
No 9
>1v8y_A ADP-ribose pyrophosphatase; nudix motif, loop-helix-loop, MUTT family, riken structural genomics/proteomics initiative, RSGI; HET: APR; 1.65A {Thermus thermophilus} SCOP: d.113.1.1 PDB: 1v8v_A* 1v8n_A 1v8l_A* 1v8m_A* 1v8i_A 1v8r_A* 1v8s_A* 1v8t_A* 1v8w_A 1v8u_A
Probab=99.86 E-value=2e-21 Score=159.08 Aligned_cols=115 Identities=23% Similarity=0.337 Sum_probs=86.6
Q ss_pred ceeEEEEEEEeCCceEEEEEEecCCCCCCCceeCcceeccCCCCHHHHHHHHHHHHhCCCcceeEEEEEEeeeccccceE
Q 039665 122 HRVGVGAFVMNNKRELLVVQENNGALKGTGVWKLPTGTIEEGEDICAAAVREVKEETGIDTEFVEVLAFRQSHRSFFRKS 201 (275)
Q Consensus 122 ~~v~v~~vv~~~~~~vLLv~r~~~~~~~~~~w~lPgG~ve~gEs~~~aA~REl~EEtGl~~~~~~~l~~~~~~~~~~~~~ 201 (275)
++.+|++++++ ++++||++|++.+ .+++.|+||||++|+||++.+||+||++||||+ +..+..++.+..........
T Consensus 33 ~~~~v~vii~~-~~~vLL~~~~r~~-~~~~~w~lPgG~ve~gEs~~~aa~REl~EEtGl-~~~~~~l~~~~~~~~~~~~~ 109 (170)
T 1v8y_A 33 HKPAVAVIALR-EGRMLFVRQMRPA-VGLAPLEIPAGLIEPGEDPLEAARRELAEQTGL-SGDLTYLFSYFVSPGFTDEK 109 (170)
T ss_dssp ECCEEEEEEEE-TTEEEEEECCBTT-TTBCCBBCSEEECCTTCCHHHHHHHHHHHHHSE-EEEEEEEEEEESCTTTBCCE
T ss_pred cCCeEEEEEEE-CCEEEEEEEEeCC-CCCCEEECCccccCCCCCHHHHHHHHHHHHHCC-CcCceeeEEEecCCCccccE
Confidence 34568888899 8999999987655 367899999999999999999999999999999 88888888776555555566
Q ss_pred EEEEEEEEecCCccccCCccccceEEEEeHhhHhcCCCc
Q 039665 202 DLFFVCMLRPRNFHIQKQDSEIAAAQWMQAEDYAAQPYV 240 (275)
Q Consensus 202 ~~~f~~~~~~~~~~~~~~~~E~~~~~Wv~~eel~~~~~~ 240 (275)
.++|+|..... .....+++|..++.|++++++.++...
T Consensus 110 ~~~f~~~~~~~-~~~~~~~~E~~~~~W~~~~el~~~~~~ 147 (170)
T 1v8y_A 110 THVFLAENLKE-VEAHPDEDEAIEVVWMRPEEALERHQR 147 (170)
T ss_dssp EEEEEEEEEEE-CC--------CEEEEECHHHHHHHHHT
T ss_pred EEEEEEEeccc-cCCCCCCCceEEEEEEEHHHHHHHHHC
Confidence 77788765322 233446788999999999999887543
No 10
>3ees_A Probable pyrophosphohydrolase; nudix, RNA pyrophosphohydrolase; 1.90A {Bdellovibrio bacteriovorus} PDB: 3eeu_A 3ef5_A* 3ffu_A*
Probab=99.86 E-value=3.6e-21 Score=153.81 Aligned_cols=129 Identities=21% Similarity=0.238 Sum_probs=98.6
Q ss_pred eeEEEEEEEeCCceEEEEEEecCCCCCCCceeCcceeccCCCCHHHHHHHHHHHHhCCCcceeEEEEEEeeeccccceEE
Q 039665 123 RVGVGAFVMNNKRELLVVQENNGALKGTGVWKLPTGTIEEGEDICAAAVREVKEETGIDTEFVEVLAFRQSHRSFFRKSD 202 (275)
Q Consensus 123 ~v~v~~vv~~~~~~vLLv~r~~~~~~~~~~w~lPgG~ve~gEs~~~aA~REl~EEtGl~~~~~~~l~~~~~~~~~~~~~~ 202 (275)
.+.+++++++.+++|||++|...+ .++|.|.||||++++||++.+||+||++||||+.+....+++...+.+.......
T Consensus 21 ~~~~~~~i~~~~~~vLl~~r~~~~-~~~g~w~~PgG~ve~gE~~~~aa~RE~~EE~Gl~~~~~~~~~~~~~~~~~~~~~~ 99 (153)
T 3ees_A 21 WIPVVAGFLRKDGKILVGQRPENN-SLAGQWEFPGGKIENGETPEEALARELNEELGIEAEVGELKLACTHSYGDVGILI 99 (153)
T ss_dssp EEEEEEEEEEETTEEEEEECCTTS-TTTTCEECSEEECCTTCCHHHHHHHHHHHHHSCEEECCCEEEEEEEEETTEEEEE
T ss_pred eEEEEEEEEEECCEEEEEEeCCCC-CCCCeEECCceeeCCCCCHHHHHHHHHHHHHCCccccCceEEEEEEecCCCeEEE
Confidence 344556666777999999998654 3679999999999999999999999999999999988888887666666555555
Q ss_pred EEEEEEEecCCccccCCccccceEEEEeHhhHhcCCCcccchHHHHHHHHHHhhccC
Q 039665 203 LFFVCMLRPRNFHIQKQDSEIAAAQWMQAEDYAAQPYVLKHQMFNYICQICLTKSEK 259 (275)
Q Consensus 203 ~~f~~~~~~~~~~~~~~~~E~~~~~Wv~~eel~~~~~~~~~~~~~~~~~~~~~~~~~ 259 (275)
++|.|..... . .+..|..++.|++++++.++++... .+.+++.+.+.++.
T Consensus 100 ~~~~~~~~~~--~--~~~~e~~~~~W~~~~el~~~~~~~~---~~~~l~~~~~~~~~ 149 (153)
T 3ees_A 100 LFYEILYWKG--E--PRAKHHMMLEWIHPEELKHRNIPEA---NRKILHKIYKALGL 149 (153)
T ss_dssp EEEEECEEES--C--CCCSSSSEEEEECGGGGGGSCCCHH---HHTTHHHHHHHTTC
T ss_pred EEEEEEECCC--C--cCCCccceEEEecHHHhhhCCCCcc---hHHHHHHHHHhhcc
Confidence 6666644322 2 3567888999999999999877644 45556666555543
No 11
>4dyw_A MUTT/nudix family protein; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.50A {Burkholderia pseudomallei}
Probab=99.86 E-value=3e-21 Score=156.08 Aligned_cols=122 Identities=20% Similarity=0.311 Sum_probs=90.2
Q ss_pred CcCCCCCCCcceeEEEEEEEeCCceEEEEEEecCCCCCCCceeCcceeccCCCCHHHHHHHHHHHHhCCCcceeEEEEEE
Q 039665 112 TADVLPANASHRVGVGAFVMNNKRELLVVQENNGALKGTGVWKLPTGTIEEGEDICAAAVREVKEETGIDTEFVEVLAFR 191 (275)
Q Consensus 112 ~~~~~p~~~~~~v~v~~vv~~~~~~vLLv~r~~~~~~~~~~w~lPgG~ve~gEs~~~aA~REl~EEtGl~~~~~~~l~~~ 191 (275)
.+..++....++++|+++|++ +++|||++|.+.+ ..+.|.||||++++||++.+||+||++||||+.+....+++.+
T Consensus 18 ~p~~m~~~~~~~~~v~~vi~~-~~~vLL~~r~~~~--~~~~w~lPgG~ve~gEs~~~aa~REl~EEtGl~~~~~~~~~~~ 94 (157)
T 4dyw_A 18 GPGSMQHTEQPRVGCGAAIVR-DGRILLIKRKRAP--EAGCWGLPGGKVDWLEPVERAVCREIEEELGIALERATLLCVV 94 (157)
T ss_dssp --------CCCEEEEEEEEEE-TTEEEEEEECSSS--STTCEECCEEECCTTCCHHHHHHHHHHHHHSCEEESCEEEEEE
T ss_pred CCCCCCCCCCceeEEEEEEEE-CCEEEEEEecCCC--CCCEEECCcccCCCCCCHHHHHHHHHHHHHCcccccCcEEEEE
Confidence 334444455678889999998 7899999998654 6799999999999999999999999999999999988888877
Q ss_pred eeecc--ccceEEEEEEEEEecCCccccCCccccceEEEEeHhhHhcC
Q 039665 192 QSHRS--FFRKSDLFFVCMLRPRNFHIQKQDSEIAAAQWMQAEDYAAQ 237 (275)
Q Consensus 192 ~~~~~--~~~~~~~~f~~~~~~~~~~~~~~~~E~~~~~Wv~~eel~~~ 237 (275)
..... ......++|+|...... ....+++|+.+++|++++++.+.
T Consensus 95 ~~~~~~~~~~~~~~~f~~~~~~~~-~~~~~~~E~~~~~W~~~~el~~~ 141 (157)
T 4dyw_A 95 DHIDAANGEHWVAPVYLAHAFSGE-PRVVEPDRHEALGWFALDDLPQP 141 (157)
T ss_dssp EEEETTTTEEEEEEEEEESEEESC-CCCSCTTTEEEEEEEETTSCCSS
T ss_pred EeeccCCCcEEEEEEEEEEEcCCC-cccCCCCcEeEEEEECHHHcccc
Confidence 66553 22344456666443222 11234578999999999999884
No 12
>3r03_A Nudix hydrolase; structural genomics, PSI2, protein structure INIT NEW YORK SGX research center for structural genomics, nysgx; HET: ADP; 2.49A {Rhodospirillum rubrum} SCOP: d.113.1.0
Probab=99.86 E-value=7.2e-21 Score=150.77 Aligned_cols=128 Identities=26% Similarity=0.316 Sum_probs=94.9
Q ss_pred eeEEEEEEEeCCceEEEEEEecCCCCCCCceeCcceeccCCCCHHHHHHHHHHHHhCCCcceeE--EEEEEeeeccccce
Q 039665 123 RVGVGAFVMNNKRELLVVQENNGALKGTGVWKLPTGTIEEGEDICAAAVREVKEETGIDTEFVE--VLAFRQSHRSFFRK 200 (275)
Q Consensus 123 ~v~v~~vv~~~~~~vLLv~r~~~~~~~~~~w~lPgG~ve~gEs~~~aA~REl~EEtGl~~~~~~--~l~~~~~~~~~~~~ 200 (275)
...+++++++.+++|||++|...+. ++|.|.||||++++||++.+||+||++||||+.+.... .+....+.......
T Consensus 8 ~~~~~~vi~~~~~~vLl~~r~~~~~-~~g~w~lPgG~ve~gE~~~~aa~RE~~EE~Gl~~~~~~~~~~~~~~~~~~~~~~ 86 (144)
T 3r03_A 8 LLVTAAALIDPDGRVLLAQRPPGKS-LAGLWEFPGGKLEPGETPEAALVRELAEELGVDTRASCLAPLAFASHSYDTFHL 86 (144)
T ss_dssp EEEEEEEEBCTTSCEEEEECCTTSS-STTCEECSEEECCTTCCHHHHHHHHHHHHHCCBCCGGGCEEEEEEEEECSSSEE
T ss_pred eEEEEEEEEcCCCEEEEEEeCCCCC-CCCcEECCCcEecCCCCHHHHHHHHHHHHhCceeeccceEEEEeeeccCCCeEE
Confidence 3456677788889999999986554 67999999999999999999999999999999987763 34444455555455
Q ss_pred EEEEEEEEEecCCccccCCccccceEEEEeHhhHhcCCCcccchHHHHHHHHHHhhcc
Q 039665 201 SDLFFVCMLRPRNFHIQKQDSEIAAAQWMQAEDYAAQPYVLKHQMFNYICQICLTKSE 258 (275)
Q Consensus 201 ~~~~f~~~~~~~~~~~~~~~~E~~~~~Wv~~eel~~~~~~~~~~~~~~~~~~~~~~~~ 258 (275)
..++|.|... .. .....|..+++|++++++.+++++.. .+.+++.+.+...
T Consensus 87 ~~~~~~~~~~--~~--~~~~~e~~~~~W~~~~el~~~~~~~~---~~~~l~~~~~~~~ 137 (144)
T 3r03_A 87 LMPLYACRSW--RG--RATAREGQTLAWVRAERLREYPMPPA---DLPLIPILQDWLE 137 (144)
T ss_dssp EEEEEEECCC--BS--CCCCCSSCEEEEECGGGGGGSCCCTT---TTTHHHHHHHHC-
T ss_pred EEEEEEEEec--CC--ccCCCCcceEEEEeHHHhccCCCCcc---hHHHHHHHhCccc
Confidence 5566666432 22 23467888999999999999988765 3455555555443
No 13
>3gg6_A Nudix motif 18, nucleoside diphosphate-linked moiety X motif 18; NUDT18, NXR1, nucleotide hydrolase, hydrolase, structural genomics; 2.10A {Homo sapiens}
Probab=99.86 E-value=6.1e-21 Score=153.58 Aligned_cols=129 Identities=23% Similarity=0.328 Sum_probs=97.2
Q ss_pred ceeEEEEEEEeCCceEEEEEEecCCCCCCCceeCcceeccCCCCHHHHHHHHHHHHhCCCcceeEEEEEEeeeccccceE
Q 039665 122 HRVGVGAFVMNNKRELLVVQENNGALKGTGVWKLPTGTIEEGEDICAAAVREVKEETGIDTEFVEVLAFRQSHRSFFRKS 201 (275)
Q Consensus 122 ~~v~v~~vv~~~~~~vLLv~r~~~~~~~~~~w~lPgG~ve~gEs~~~aA~REl~EEtGl~~~~~~~l~~~~~~~~~~~~~ 201 (275)
....|++++++.+++|||++|.+.+ +.+.|.||||++++||++.+||+||++||||+.+....+++.+... .+..
T Consensus 19 ~~~~v~~~i~~~~~~vLl~~r~~~~--~~~~w~~PgG~ve~gE~~~~aa~REl~EEtGl~~~~~~~~~~~~~~---~~~~ 93 (156)
T 3gg6_A 19 VCYVVLAVFLSEQDEVLLIQEAKRE--CRGSWYLPAGRMEPGETIVEALQREVKEEAGLHCEPETLLSVEERG---PSWV 93 (156)
T ss_dssp CEEEEEEECBCTTSEEEEEECCCTT--STTCEECSEEECCTTCCHHHHHHHHHHHHHCEEEEEEEEEEEEESS---TTEE
T ss_pred eEEEEEEEEEeCCCEEEEEEecCCC--CCCEEECCeeeccCCCCHHHHHHHHHHHhhCceeEeeeEEEEEcCC---CCEE
Confidence 3445777888889999999998644 5789999999999999999999999999999999988888876543 3345
Q ss_pred EEEEEEEEecCCccc-cCCccccceEEEEeHhhHhcCCCcccchHHHHHHHHHHhhcc
Q 039665 202 DLFFVCMLRPRNFHI-QKQDSEIAAAQWMQAEDYAAQPYVLKHQMFNYICQICLTKSE 258 (275)
Q Consensus 202 ~~~f~~~~~~~~~~~-~~~~~E~~~~~Wv~~eel~~~~~~~~~~~~~~~~~~~~~~~~ 258 (275)
.++|+|......... ..+++|+.+++|++++++.++..... +..++..+..++.
T Consensus 94 ~~~f~~~~~~~~~~~~~~~~~E~~~~~W~~~~el~~~~~~~~---~~~~l~~~~~~~~ 148 (156)
T 3gg6_A 94 RFVFLARPTGGILKTSKEADAESLQAAWYPRTSLPTPLRAHD---ILHLVELAAQYRQ 148 (156)
T ss_dssp EEEEEEEEEEECCCCGGGCSSSCSEEEEEETTSCCSSBSCTH---HHHHHHHHHHHHH
T ss_pred EEEEEEEeeCCeeccCCCCCcceeeeEEEcHHHCcccccchh---HHHHHHHHHHHhh
Confidence 677777654322221 23557899999999999988765443 4455555554443
No 14
>2rrk_A ORF135, CTP pyrophosphohydrolase; NMR {Escherichia coli}
Probab=99.85 E-value=1.4e-20 Score=148.23 Aligned_cols=122 Identities=22% Similarity=0.200 Sum_probs=91.1
Q ss_pred EEEEEEeCCceEEEEEEecCCCCCCCceeCcceeccCCCCHHHHHHHHHHHHhCCCcceeEEEEEEeeeccccceEEEEE
Q 039665 126 VGAFVMNNKRELLVVQENNGALKGTGVWKLPTGTIEEGEDICAAAVREVKEETGIDTEFVEVLAFRQSHRSFFRKSDLFF 205 (275)
Q Consensus 126 v~~vv~~~~~~vLLv~r~~~~~~~~~~w~lPgG~ve~gEs~~~aA~REl~EEtGl~~~~~~~l~~~~~~~~~~~~~~~~f 205 (275)
++++|++.+++|||++|...+. ++|.|+||||++++||++.+||+||++||||+.+.....++...+.........++|
T Consensus 11 ~~~~ii~~~~~vLl~~r~~~~~-~~g~w~lPgG~ve~gE~~~~aa~RE~~EE~Gl~~~~~~~~~~~~~~~~~~~~~~~~~ 89 (140)
T 2rrk_A 11 VVAAIIERDGKILLAQRPAQSD-QAGLWEFAGGKVEPDESQRQALVRELREELGIEATVGEYVASHQREVSGRIIHLHAW 89 (140)
T ss_dssp EEEEEEEETTEEEEEECCSSCS-CCCCEECCEEECCTTSCHHHHHHHHHHHHSCEEEECCEEEEEEEEEETTEEEEEEEE
T ss_pred EEEEEEEcCCEEEEEEcCCCCC-CCCEEECCceecCCCCCHHHHHHHHHHHHHCCeeecccEEEEEEEecCCcEEEEEEE
Confidence 3334446678999999975543 679999999999999999999999999999999988888887765555544555666
Q ss_pred EEEEecCCccccCCccccceEEEEeHhhHhcCCCcccchHHHHHHHHHHh
Q 039665 206 VCMLRPRNFHIQKQDSEIAAAQWMQAEDYAAQPYVLKHQMFNYICQICLT 255 (275)
Q Consensus 206 ~~~~~~~~~~~~~~~~E~~~~~Wv~~eel~~~~~~~~~~~~~~~~~~~~~ 255 (275)
.|.... .. .+..|+.++.|++++++.++++... .+.+++.+++
T Consensus 90 ~~~~~~--~~--~~~~e~~~~~W~~~~el~~~~~~~~---~~~~l~~~~~ 132 (140)
T 2rrk_A 90 HVPDFH--GT--LQAHEHQALVWCSPEEALQYPLAPA---DIPLLEAFMA 132 (140)
T ss_dssp EESEEE--EC--CCCSSCSCEEEECHHHHTTSCCCTT---HHHHHHHHHH
T ss_pred EEEeeC--CC--cCCCccceeEEeCHHHHhhCCCChh---HHHHHHHHHH
Confidence 664332 22 2456788999999999999887654 3344444444
No 15
>1rya_A GDP-mannose mannosyl hydrolase; GDP-glucose, nudix, nudix Mg-complex; HET: GDP; 1.30A {Escherichia coli} SCOP: d.113.1.5 PDB: 2gt2_A 2gt4_A* 2i8t_A* 2i8u_A*
Probab=99.85 E-value=3.1e-21 Score=155.58 Aligned_cols=116 Identities=20% Similarity=0.236 Sum_probs=89.3
Q ss_pred ceeEEEEEEEeCCceEEEEEEecCCCCCCCceeCcceeccCCCCHHHHHHHHHHHHhCCCc--ceeEEEEEEeeecccc-
Q 039665 122 HRVGVGAFVMNNKRELLVVQENNGALKGTGVWKLPTGTIEEGEDICAAAVREVKEETGIDT--EFVEVLAFRQSHRSFF- 198 (275)
Q Consensus 122 ~~v~v~~vv~~~~~~vLLv~r~~~~~~~~~~w~lPgG~ve~gEs~~~aA~REl~EEtGl~~--~~~~~l~~~~~~~~~~- 198 (275)
++++|++++++.+++|||++|.+.+ .++.|.||||++++||++.+||+||++||||+.+ ....+++.....+...
T Consensus 17 ~~~~v~~vi~~~~~~vLl~~r~~~~--~~g~w~~PgG~ve~gE~~~~aa~REl~EEtGl~~~~~~~~~~~~~~~~~~~~~ 94 (160)
T 1rya_A 17 PLVSLDFIVENSRGEFLLGKRTNRP--AQGYWFVPGGRVQKDETLEAAFERLTMAELGLRLPITAGQFYGVWQHFYDDNF 94 (160)
T ss_dssp CEEEEEEEEECTTSCEEEEEECSSS--STTSEECCEEECCTTCCHHHHHHHHHHHHHSSCCCGGGSEEEEEEEEEESSBT
T ss_pred cEEEEEEEEEcCCCEEEEEeccCCC--CCCEEECCccccCCCCCHHHHHHHHHHHHHCCCCCcccceEEEEEeEEEcccc
Confidence 4578889999988999999998643 4789999999999999999999999999999995 4667777665433321
Q ss_pred -------ceEEEEEEEEEecCCccccCCccccceEEEEeHhhHhcCCCcc
Q 039665 199 -------RKSDLFFVCMLRPRNFHIQKQDSEIAAAQWMQAEDYAAQPYVL 241 (275)
Q Consensus 199 -------~~~~~~f~~~~~~~~~~~~~~~~E~~~~~Wv~~eel~~~~~~~ 241 (275)
....++|.|... ...+..++.|+.+++|++++++.+++...
T Consensus 95 ~~~~~~~~~~~~~f~~~~~--~~~~~~~~~e~~~~~W~~~~el~~~~~~~ 142 (160)
T 1rya_A 95 SGTDFTTHYVVLGFRFRVS--EEELLLPDEQHDDYRWLTSDALLASDNVH 142 (160)
T ss_dssp TBSSSCEEEEEEEEEEECC--GGGCCCCSSSEEEEEEECHHHHHHCTTBC
T ss_pred cCCCcCcEEEEEEEEEEcC--ccccccCCCccceEEEecHHHHhhccccC
Confidence 234455655443 33445567789999999999999876543
No 16
>2fkb_A Putative nudix hydrolase YFCD; putative protein, MAD, structural genomics, escherichia coli putative nudix hydrolase, PSI; HET: MSE; 2.00A {Escherichia coli K12} SCOP: d.113.1.2
Probab=99.85 E-value=3.2e-20 Score=152.98 Aligned_cols=131 Identities=16% Similarity=0.163 Sum_probs=98.0
Q ss_pred eEEEEEEEeCCceEEEEEEecCCCCCCCceeC-cceeccCCCCHHHHHHHHHHHHhCCCcceeEEEEEEeeeccccceEE
Q 039665 124 VGVGAFVMNNKRELLVVQENNGALKGTGVWKL-PTGTIEEGEDICAAAVREVKEETGIDTEFVEVLAFRQSHRSFFRKSD 202 (275)
Q Consensus 124 v~v~~vv~~~~~~vLLv~r~~~~~~~~~~w~l-PgG~ve~gEs~~~aA~REl~EEtGl~~~~~~~l~~~~~~~~~~~~~~ 202 (275)
.++++++++.+++|||++|.......+|.|+| |||++++||++.+||+||++||||+.+..+..++.+...........
T Consensus 38 ~~~~v~i~~~~~~vLl~~R~~~~~~~~g~w~l~pGG~ve~gE~~~~aa~REl~EEtGl~~~~~~~l~~~~~~~~~~~~~~ 117 (180)
T 2fkb_A 38 RATYIVVHDGMGKILVQRRTETKDFLPGMLDATAGGVVQADEQLLESARREAEEELGIAGVPFAEHGQFYFEDKNCRVWG 117 (180)
T ss_dssp EEEEEEEECSSSCEEEEEECSSCSSSTTCEESSBCCBCBTTCCHHHHHHHHHHHHHCCBSCCCEEEEEEEEEETTEEEEE
T ss_pred eEEEEEEECCCCEEEEEECCCCCccCCCcEEeecCCCCCCCCCHHHHHHHHHHHHHCCCccceEEEEEEEecCCCceEEE
Confidence 36778888888999999887554445789999 99999999999999999999999999888888877665555444555
Q ss_pred EEEEEEEecCCccccCCccccceEEEEeHhhHhcCCCcccchHHHHHHHHHHhhcc
Q 039665 203 LFFVCMLRPRNFHIQKQDSEIAAAQWMQAEDYAAQPYVLKHQMFNYICQICLTKSE 258 (275)
Q Consensus 203 ~~f~~~~~~~~~~~~~~~~E~~~~~Wv~~eel~~~~~~~~~~~~~~~~~~~~~~~~ 258 (275)
++|+|. ....+..++.|+.++.|++++++.++.... .+....++..++....
T Consensus 118 ~~f~~~---~~~~~~~~~~E~~~~~W~~~~el~~~~~~~-~~~~~~~l~~~~~~~~ 169 (180)
T 2fkb_A 118 ALFSCV---SHGPFALQEDEVSEVCWLTPEEITARCDEF-TPDSLKALALWMKRNA 169 (180)
T ss_dssp EEEEEE---CCCCCCCCTTTEEEEEEECHHHHHTTGGGB-CHHHHHHHHHHHHHC-
T ss_pred EEEEEe---cCCCcCCChhHhheEEEecHHHHHHHHHHh-CCcHHHHHHHHHHhhc
Confidence 667665 234455567899999999999999983211 1234555655555543
No 17
>3u53_A BIS(5'-nucleosyl)-tetraphosphatase [asymmetrical]; hydrolase; 2.71A {Homo sapiens} PDB: 1xsa_A 1xsb_A 1xsc_A*
Probab=99.85 E-value=9.8e-21 Score=152.65 Aligned_cols=110 Identities=25% Similarity=0.447 Sum_probs=82.3
Q ss_pred EEEEEEE---------eCCceEEEEEEecCCCCCCCceeCcceeccCCCCHHHHHHHHHHHHhCCCcceeEEEEEEeee-
Q 039665 125 GVGAFVM---------NNKRELLVVQENNGALKGTGVWKLPTGTIEEGEDICAAAVREVKEETGIDTEFVEVLAFRQSH- 194 (275)
Q Consensus 125 ~v~~vv~---------~~~~~vLLv~r~~~~~~~~~~w~lPgG~ve~gEs~~~aA~REl~EEtGl~~~~~~~l~~~~~~- 194 (275)
++|++|+ |++.++||+|+.+ +++.|.||||++|+||++.+||+||++||||+.+.....++.+...
T Consensus 5 a~G~iifr~~~~~~~~n~~~e~LL~~r~~----~~~~W~lPgG~ve~gEt~~~aa~REl~EEtGl~~~~~~~~~~~~~~~ 80 (155)
T 3u53_A 5 ACGLIIFRRCLIPKVDNNAIEFLLLQASD----GIHHWTPPKGHVEPGEDDLETALRETQEEAGIEAGQLTIIEGFKREL 80 (155)
T ss_dssp EEEEEEEEECCCSSSSSCSEEEEEEEESS----SSCCEECSEEECCSSCCHHHHHHHHHHHHHCCCGGGEEEEEEEEEEE
T ss_pred EeEEEEEccccccceeCCCcEEEEEEecC----CCCCEECCeeeccCCCCHHHHHHHHHHHHHCCccccceeeeeEeeee
Confidence 4677777 4567899999974 4578999999999999999999999999999999888777543322
Q ss_pred ---ccccceEEEEEEEEEecCCccccCCccccceEEEEeHhhHhcCCC
Q 039665 195 ---RSFFRKSDLFFVCMLRPRNFHIQKQDSEIAAAQWMQAEDYAAQPY 239 (275)
Q Consensus 195 ---~~~~~~~~~~f~~~~~~~~~~~~~~~~E~~~~~Wv~~eel~~~~~ 239 (275)
.........+|++........+. .++|+.+++|++++|+.++..
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~E~~~~~W~~~~ea~~~~~ 127 (155)
T 3u53_A 81 NYVARNKPKTVIYWLAEVKDYDVEIR-LSHEHQAYRWLGLEEACQLAQ 127 (155)
T ss_dssp EEEETTEEEEEEEEEEEESCTTCCCC-CCTTEEEEEEECHHHHHHHHC
T ss_pred ecCCCcceeEEEEEEEEEeccCCccC-CCcceeEEEEeEHHHHHHHcC
Confidence 12223444566666554444433 456899999999999987644
No 18
>2pbt_A AP4A hydrolase; nudix protein, diadenosine polyphosphate, structural genomics, NPPSFA; HET: PGE; 1.80A {Aquifex aeolicus} PDB: 2pq1_A* 3i7u_A* 3i7v_A*
Probab=99.85 E-value=1e-20 Score=148.02 Aligned_cols=122 Identities=21% Similarity=0.301 Sum_probs=90.5
Q ss_pred eeEEEEEEEeCCceEEEEEEecCCCCCCCceeCcceeccCCCCHHHHHHHHHHHHhCCCcceeEEEEEEeeecc----cc
Q 039665 123 RVGVGAFVMNNKRELLVVQENNGALKGTGVWKLPTGTIEEGEDICAAAVREVKEETGIDTEFVEVLAFRQSHRS----FF 198 (275)
Q Consensus 123 ~v~v~~vv~~~~~~vLLv~r~~~~~~~~~~w~lPgG~ve~gEs~~~aA~REl~EEtGl~~~~~~~l~~~~~~~~----~~ 198 (275)
..+|++++++ +++|||++|.+ +.|.||||++++||++.+||+||++||||+.+.....++.....+. ..
T Consensus 4 ~~~~~~vi~~-~~~vLl~~r~~------~~w~~PgG~ve~gE~~~~aa~RE~~EE~Gl~~~~~~~~~~~~~~~~~~~~~~ 76 (134)
T 2pbt_A 4 EFSAGGVLFK-DGEVLLIKTPS------NVWSFPKGNIEPGEKPEETAVREVWEETGVKGEILDYIGEIHYWYTLKGERI 76 (134)
T ss_dssp EEEEEEEEEE-TTEEEEEECTT------SCEECCEEECCTTCCHHHHHHHHHHHHHSEEEEEEEEEEEEEEEEEETTEEE
T ss_pred ceEEEEEEEE-CCEEEEEEeCC------CcEECCccccCCCCCHHHHHHHHHHHHHCCccEEeeeeeEEEEEeeCCCcEE
Confidence 4568888888 67999999863 8899999999999999999999999999999998888877654443 22
Q ss_pred ceEEEEEEEEEecCCccccCCccccceEEEEeHhhHhcCCCcccchHHHHHHHHHHhhc
Q 039665 199 RKSDLFFVCMLRPRNFHIQKQDSEIAAAQWMQAEDYAAQPYVLKHQMFNYICQICLTKS 257 (275)
Q Consensus 199 ~~~~~~f~~~~~~~~~~~~~~~~E~~~~~Wv~~eel~~~~~~~~~~~~~~~~~~~~~~~ 257 (275)
....++|+|.... ......+ |+.+++|++++++.++..... .+.++..+++.+
T Consensus 77 ~~~~~~~~~~~~~--~~~~~~~-e~~~~~W~~~~el~~~~~~~~---~~~~l~~~~~~~ 129 (134)
T 2pbt_A 77 FKTVKYYLMKYKE--GEPRPSW-EVKDAKFFPIKEAKKLLKYKG---DKEIFEKALKLK 129 (134)
T ss_dssp EEEEEEEEEEEEE--ECCCCCT-TSSEEEEEEHHHHHHHCCSHH---HHHHHHHHHHHH
T ss_pred EEEEEEEEEEecC--CCcCCCc-ceeEEEEEcHHHHHhhhcchh---HHHHHHHHHHHh
Confidence 3445666665543 2333333 899999999999998766543 334444444433
No 19
>1ktg_A Diadenosine tetraphosphate hydrolase; nudix, AMP, magnesium cluster; HET: AMP; 1.80A {Caenorhabditis elegans} SCOP: d.113.1.1 PDB: 1kt9_A*
Probab=99.85 E-value=1.5e-20 Score=147.93 Aligned_cols=126 Identities=21% Similarity=0.240 Sum_probs=90.2
Q ss_pred eeEEEEEEEeC---CceEEEEEEecCCCCCCCceeCcceeccCCCCHHHHHHHHHHHHhCCCcceeEEE----EEEeeec
Q 039665 123 RVGVGAFVMNN---KRELLVVQENNGALKGTGVWKLPTGTIEEGEDICAAAVREVKEETGIDTEFVEVL----AFRQSHR 195 (275)
Q Consensus 123 ~v~v~~vv~~~---~~~vLLv~r~~~~~~~~~~w~lPgG~ve~gEs~~~aA~REl~EEtGl~~~~~~~l----~~~~~~~ 195 (275)
..++++++++. +++|||+||+. +++.|.||||++++||++.+||+||++||||+.+....++ +......
T Consensus 3 ~~~~~~vi~~~~~~~~~vLl~~r~~----~~~~w~~PgG~ve~gE~~~~aa~RE~~EEtGl~~~~~~~~~~~~~~~~~~~ 78 (138)
T 1ktg_A 3 VKAAGLVIYRKLAGKIEFLLLQASY----PPHHWTPPKGHVDPGEDEWQAAIRETKEEANITKEQLTIHEDCHETLFYEA 78 (138)
T ss_dssp EEEEEEEEEEEETTEEEEEEEEESS----TTCCEESSEEECCTTCCHHHHHHHHHHHHHCCCGGGEEEEEEEEEEEEEEE
T ss_pred eEEEEEEEEEecCCCcEEEEEEccC----CCCcEeCCccccCCCCCHHHHHHHHHHHHHCCCccceEEeccccceEEEEe
Confidence 34677888874 46899999862 4579999999999999999999999999999976655554 2332323
Q ss_pred cccceEEEEEEEEEecCCccccCCccccceEEEEeHhhHhcCCCcccchHHHHHHHHHHhhc
Q 039665 196 SFFRKSDLFFVCMLRPRNFHIQKQDSEIAAAQWMQAEDYAAQPYVLKHQMFNYICQICLTKS 257 (275)
Q Consensus 196 ~~~~~~~~~f~~~~~~~~~~~~~~~~E~~~~~Wv~~eel~~~~~~~~~~~~~~~~~~~~~~~ 257 (275)
.......++|+|..... ....+++|+.+++|++++++.++..... .+.+++.+.+++
T Consensus 79 ~~~~~~~~~f~~~~~~~--~~~~~~~e~~~~~W~~~~el~~~~~~~~---~~~~l~~~~~~l 135 (138)
T 1ktg_A 79 KGKPKSVKYWLAKLNNP--DDVQLSHEHQNWKWCELEDAIKIADYAE---MGSLLRKFSAFL 135 (138)
T ss_dssp TTEEEEEEEEEEEECSC--CCCCCCTTEEEEEEECHHHHHHHHCCHH---HHHHHHHHHHHH
T ss_pred CCCceEEEEEEEEecCC--cccCCCchhcEeEeccHHHHHHhhccch---HHHHHHHHHHHh
Confidence 33345667777766432 2234567899999999999998765443 444555555443
No 20
>3exq_A Nudix family hydrolase; protein structure initiative II(PSI II), NYSGXRC, 11180K, structural genomics; 2.00A {Lactobacillus brevis atcc 367}
Probab=99.85 E-value=1.6e-20 Score=152.35 Aligned_cols=128 Identities=18% Similarity=0.143 Sum_probs=95.7
Q ss_pred cceeEEEEEEEeCC-ceEEEEEEecCCCCCCCceeCcceeccCCCCHHHHHHHHHHHHhCCCcceeEEEEEEeeeccccc
Q 039665 121 SHRVGVGAFVMNNK-RELLVVQENNGALKGTGVWKLPTGTIEEGEDICAAAVREVKEETGIDTEFVEVLAFRQSHRSFFR 199 (275)
Q Consensus 121 ~~~v~v~~vv~~~~-~~vLLv~r~~~~~~~~~~w~lPgG~ve~gEs~~~aA~REl~EEtGl~~~~~~~l~~~~~~~~~~~ 199 (275)
..++++.+++++++ ++|||++|.+.. +.|.|+||||++++||++.+||+||++||||+.+....+++.........+
T Consensus 8 ~~~~~v~~vi~~~~~~~vLL~~r~~~~--~~g~w~lPgG~ve~gEs~~~aa~REl~EEtGl~~~~~~~~~~~~~~~~~~~ 85 (161)
T 3exq_A 8 PVELVTMVMVTDPETQRVLVEDKVNVP--WKAGHSFPGGHVEVGEPCATAAIREVFEETGLRLSGVTFCGTCEWFDDDRQ 85 (161)
T ss_dssp CEEEEEEEEEBCTTTCCEEEECCCCCT--TTCSBBCCCCBCCTTSCHHHHHHHHHHHHHCCEESCCEEEEEEEEECSSCS
T ss_pred CceEEEEEEEEeCCCCEEEEEEccCCC--CCCCEEccceecCCCCCHHHHHHHHHHHhhCcEecCCcEEEEEecccCCCC
Confidence 34566777888866 799999987433 567899999999999999999999999999999999999888776653333
Q ss_pred eEEEEEEEEEecCCccccCCccccceEEEEeHhhHhcCCCcccchHHHHHHHHHHh
Q 039665 200 KSDLFFVCMLRPRNFHIQKQDSEIAAAQWMQAEDYAAQPYVLKHQMFNYICQICLT 255 (275)
Q Consensus 200 ~~~~~f~~~~~~~~~~~~~~~~E~~~~~Wv~~eel~~~~~~~~~~~~~~~~~~~~~ 255 (275)
.....+++.+...... +...|..+++|++++++.++++... ++.+++.+++
T Consensus 86 ~~~~~~~~~~~~~~~~--~~~~e~~~~~W~~~~el~~~~~~~~---~~~~l~~~~~ 136 (161)
T 3exq_A 86 HRKLGLLYRASNFTGT--LKASAEGQLSWLPITALTRENSAAS---LPEFLQVFTG 136 (161)
T ss_dssp SEEEEEEEEECCEESC--CCGGGTTTEEEECGGGCCTTTBCTT---HHHHHHHHTT
T ss_pred eEEEEEEEEEeccCCc--cCCCccceEEEeeHHHhhhCccChH---HHHHHHHHhh
Confidence 3333333333322223 3456778899999999999877654 5667777666
No 21
>3id9_A MUTT/nudix family protein; hydrolase, protein structure initiative II(PSI II), NYSGXRC, structural genomics; 2.55A {Bacillus thuringiensis str}
Probab=99.85 E-value=2.1e-20 Score=152.81 Aligned_cols=135 Identities=19% Similarity=0.319 Sum_probs=96.6
Q ss_pred ceeEEEEEEEeCCceEEEEEEecCCCCCCCceeCcceeccCCCCHHHHHHHHHHHHhCCCcceeEEEEEEeeeccccceE
Q 039665 122 HRVGVGAFVMNNKRELLVVQENNGALKGTGVWKLPTGTIEEGEDICAAAVREVKEETGIDTEFVEVLAFRQSHRSFFRKS 201 (275)
Q Consensus 122 ~~v~v~~vv~~~~~~vLLv~r~~~~~~~~~~w~lPgG~ve~gEs~~~aA~REl~EEtGl~~~~~~~l~~~~~~~~~~~~~ 201 (275)
.++.|++++++ +++|||++|.+ .++.|+||||++++||++.+||+||++||||+.+....+++............
T Consensus 22 ~~~~v~~ii~~-~~~vLL~~r~~----~~~~w~~PgG~ve~gEs~~~aa~REl~EEtGl~~~~~~~~~~~~~~~~~~~~~ 96 (171)
T 3id9_A 22 MQVRVTGILIE-DEKVLLVKQKV----ANRDWSLPGGRVENGETLEEAMIREMREETGLEVKIKKLLYVCDKPDASPSLL 96 (171)
T ss_dssp CEEEEEEEEEE-TTEEEEEECSS----TTCCEECCEEECCTTCCHHHHHHHHHHHHHCCCEEEEEEEEEEEETTSSSCEE
T ss_pred eEEEEEEEEEE-CCEEEEEEEEC----CCCeEECCCccCCCCCCHHHHHHHHHHHHHCCccccceEEEEEcccCCCCcEE
Confidence 45667777777 58999999985 36899999999999999999999999999999998888888776655555555
Q ss_pred EEEEEEEEecCCcc---ccCCccccceEEEEeHhhHhcCCCcccchHHHHHHHHHHhhccCccCCCC
Q 039665 202 DLFFVCMLRPRNFH---IQKQDSEIAAAQWMQAEDYAAQPYVLKHQMFNYICQICLTKSEKEYAGFS 265 (275)
Q Consensus 202 ~~~f~~~~~~~~~~---~~~~~~E~~~~~Wv~~eel~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 265 (275)
.++|.+........ ...+++|+.+++|++++++.++.+... +..+++..+.. ...+.|+.
T Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~~E~~~~~w~~~~el~~~~~~~~---~~~~l~~~~~~-~~~~~~l~ 159 (171)
T 3id9_A 97 HITFLLERIEGEITLPSNEFDHNPIHDVQMVPINELSYYGFSET---FINLISGGLAN-AGSYQGLK 159 (171)
T ss_dssp EEEEEEEEC-------------CCCCCEEEEETGGGGGGTCCTT---CSHHHHHGGGG-TTCBCCC-
T ss_pred EEEEEEEEcCCcccCCccCCCcCeeeeEEEEeHHHHhhCCCCHH---HHHHHHHhhcc-ccceeccc
Confidence 66676654322211 123567899999999999999887655 33445555543 34455554
No 22
>1f3y_A Diadenosine 5',5'''-P1,P4-tetraphosphate hydrolase; enzyme,mixed 4-stranded beta sheet, 2-stranded antiparallel sheet; NMR {Lupinus angustifolius} SCOP: d.113.1.1 PDB: 1jkn_A*
Probab=99.85 E-value=8e-21 Score=153.65 Aligned_cols=130 Identities=22% Similarity=0.394 Sum_probs=93.2
Q ss_pred ceeEEEEEEEeCCceEEEEEEecCCCCCCCceeCcceeccCCCCHHHHHHHHHHHHhCCCcceeEEEEE--Eeeecc---
Q 039665 122 HRVGVGAFVMNNKRELLVVQENNGALKGTGVWKLPTGTIEEGEDICAAAVREVKEETGIDTEFVEVLAF--RQSHRS--- 196 (275)
Q Consensus 122 ~~v~v~~vv~~~~~~vLLv~r~~~~~~~~~~w~lPgG~ve~gEs~~~aA~REl~EEtGl~~~~~~~l~~--~~~~~~--- 196 (275)
.+.+|++++++.+++|||++|.+ .++.|.||||++++||++.+||+||++||||+.+..+..... ....+.
T Consensus 13 ~~~~v~~~i~~~~~~vLl~~r~~----~~g~w~~PgG~ve~gE~~~~aa~RE~~EEtGl~~~~~~~~~~~~~~~~~~~~~ 88 (165)
T 1f3y_A 13 YRRNVGICLMNNDKKIFAASRLD----IPDAWQMPQGGIDEGEDPRNAAIRELREETGVTSAEVIAEVPYWLTYDFPPKV 88 (165)
T ss_dssp CCCEEEEEEECTTSCEEEEEETT----EEEEEECCEEECCTTCCHHHHHHHHHHHHHCCCSEEEEEECSSCCBCCCCHHH
T ss_pred eeeeEEEEEECCCCcEEEEecCC----CCCcEECCeeccCCCCCHHHHHHHHHHHhhCCChhhhhcccccceeeecCccc
Confidence 45678889999889999999873 348999999999999999999999999999998753322210 111110
Q ss_pred -----------ccceEEEEEEEEEecCCccccC-----CccccceEEEEeHhhHhcCCCcccchHHHHHHHHHHh
Q 039665 197 -----------FFRKSDLFFVCMLRPRNFHIQK-----QDSEIAAAQWMQAEDYAAQPYVLKHQMFNYICQICLT 255 (275)
Q Consensus 197 -----------~~~~~~~~f~~~~~~~~~~~~~-----~~~E~~~~~Wv~~eel~~~~~~~~~~~~~~~~~~~~~ 255 (275)
..+...++|++........+.. +++|+.+++|++++++.++..+.....++.+++.+..
T Consensus 89 ~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~E~~~~~W~~~~el~~~~~~~~~~~~~~~~~~l~~ 163 (165)
T 1f3y_A 89 REKLNIQWGSDWKGQAQKWFLFKFTGQDQEINLLGDGSEKPEFGEWSWVTPEQLIDLTVEFKKPVYKEVLSVFAP 163 (165)
T ss_dssp HHHHGGGSCSSCCSCBEEEEEEEECSCGGGCCCCCCSSSCCSEEEEEEECHHHHHHHBCGGGHHHHHHHHHHHGG
T ss_pred cccccccccccccCceEEEEEEEecCCcccccccCCCCCCChhheeEEecHHHHHHHhhhhhHHHHHHHHHHhhh
Confidence 0123567888877654434433 3678999999999999998766555566666655443
No 23
>2yvp_A NDX2, MUTT/nudix family protein; nudix protein, ADP-ribose, FAD, hydrol structural genomics, NPPSFA; HET: RBY; 1.66A {Thermus thermophilus} PDB: 2yvn_A 2yvm_A* 2yvo_A*
Probab=99.85 E-value=1.1e-21 Score=162.20 Aligned_cols=119 Identities=19% Similarity=0.167 Sum_probs=93.5
Q ss_pred ceeEEEEEEEeCCceEEEEEEecCCCCCCCceeCcceeccCCCCHHHHHHHHHHHHhCCCcceeEEEEEEeeeccccceE
Q 039665 122 HRVGVGAFVMNNKRELLVVQENNGALKGTGVWKLPTGTIEEGEDICAAAVREVKEETGIDTEFVEVLAFRQSHRSFFRKS 201 (275)
Q Consensus 122 ~~v~v~~vv~~~~~~vLLv~r~~~~~~~~~~w~lPgG~ve~gEs~~~aA~REl~EEtGl~~~~~~~l~~~~~~~~~~~~~ 201 (275)
+..+|++++++.+++|||++|.+.+ .+++.|+||||++++||++.+||+||++||||+.+..+..++.+..........
T Consensus 40 ~~~~v~v~i~~~~~~vLL~~r~~~~-~~~~~w~~PgG~ve~gEs~~~aa~REl~EEtGl~~~~~~~l~~~~~~~~~~~~~ 118 (182)
T 2yvp_A 40 PVAASFVLPVTERGTALLVRQYRHP-TGKFLLEVPAGKVDEGETPEAAARRELREEVGAEAETLIPLPSFHPQPSFTAVV 118 (182)
T ss_dssp SCEEEEEEEBCTTSEEEEEEEEEGG-GTEEEEECCEEECCTTCCHHHHHHHHHHHHHCEECSCEEECCCBCSCTTTBCCE
T ss_pred cCCEEEEEEEcCCCEEEEEEeccCC-CCCcEEEeccccCCCCcCHHHHHHHHHHHHhCCCcccEEEEEEEeCCCCccccE
Confidence 3457888888888999999998654 357899999999999999999999999999999998888887665555544566
Q ss_pred EEEEEEEEecCCccccCCccccceEEEEeHhhHhcCCCcc
Q 039665 202 DLFFVCMLRPRNFHIQKQDSEIAAAQWMQAEDYAAQPYVL 241 (275)
Q Consensus 202 ~~~f~~~~~~~~~~~~~~~~E~~~~~Wv~~eel~~~~~~~ 241 (275)
.++|+|........+..++.|+.++.|++++++.++....
T Consensus 119 ~~~f~~~~~~~~~~~~~~~~E~~~~~W~~~~el~~~~~~~ 158 (182)
T 2yvp_A 119 FHPFLALKARVVTPPTLEEGELLESLELPLTEVYALLAKG 158 (182)
T ss_dssp EEEEEECSCEECSCCCCCTTCCEEEEEEEHHHHHHHHHTT
T ss_pred EEEEEEeccccCCCCCCCCCceEEEEEEEHHHHHHHHHcC
Confidence 6777775322123344567899999999999998875443
No 24
>1mk1_A ADPR pyrophosphatase; nudix hydrolase, adprase, adenosine DI ribose, RV1700, hydrolase; HET: APR; 2.00A {Mycobacterium tuberculosis} SCOP: d.113.1.1 PDB: 1mp2_A 1mqe_A* 1mqw_A* 1mr2_A*
Probab=99.85 E-value=2.2e-21 Score=164.16 Aligned_cols=153 Identities=16% Similarity=0.229 Sum_probs=103.4
Q ss_pred HHHHHhCCeeE----EEEccccccccchHHHhcCceeccCCCCeeeEEeecCCCcCCCCCCCcceeEEEEEEEeCCceEE
Q 039665 63 SLWRQQGKRGV----WIKLPIELANLVEPAVQEGFRYHHAEPDYLMLVYWIPETADVLPANASHRVGVGAFVMNNKRELL 138 (275)
Q Consensus 63 ~~w~~~~~~~v----W~~~~~~~~~l~~~~~~~gf~~~~~~~~~~~l~~wl~~~~~~~p~~~~~~v~v~~vv~~~~~~vL 138 (275)
..|+..+++.+ |+++....+.+ +.... . ..+++ .+..+|++++++.+++||
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~--p~G~~-~-----~~~~~-----------------~~~~av~v~i~~~~~~vL 58 (207)
T 1mk1_A 4 HDFETISSETLHTGAIFALRRDQVRM--PGGGI-V-----TREVV-----------------EHFGAVAIVAMDDNGNIP 58 (207)
T ss_dssp --CCEEEEEEEEECSSEEEEEEEEC-------C-E-----EEEEE-----------------EECCEEEEEECCTTSEEE
T ss_pred CCcEEEeEEEEEeCCEEEEEEEEEEC--CCCCE-E-----EEEEE-----------------eCCCEEEEEEEcCCCEEE
Confidence 46777777776 89998888877 32111 1 11111 123468888888889999
Q ss_pred EEEEecCCCCCCCceeCcceecc-CCCCHHHHHHHHHHHHhCCCcceeEEEEEEeeeccccceEEEEEEEEEecCCccc-
Q 039665 139 VVQENNGALKGTGVWKLPTGTIE-EGEDICAAAVREVKEETGIDTEFVEVLAFRQSHRSFFRKSDLFFVCMLRPRNFHI- 216 (275)
Q Consensus 139 Lv~r~~~~~~~~~~w~lPgG~ve-~gEs~~~aA~REl~EEtGl~~~~~~~l~~~~~~~~~~~~~~~~f~~~~~~~~~~~- 216 (275)
|++|++.+ .+++.|+||||+++ +||++.+||+||++||||+.+..+..++.++..........++|+|.........
T Consensus 59 Lvrr~r~~-~~~~~w~lPgG~ve~~gEs~~~aa~REl~EEtGl~~~~~~~l~~~~~~~~~~~~~~~~f~~~~~~~~~~~~ 137 (207)
T 1mk1_A 59 MVYQYRHT-YGRRLWELPAGLLDVAGEPPHLTAARELREEVGLQASTWQVLVDLDTAPGFSDESVRVYLATGLREVGRPE 137 (207)
T ss_dssp EEEEEETT-TTEEEEECCEEECCSTTCCHHHHHHHHHHHHHCEEEEEEEEEEEECSCTTTBCCCEEEEEEEEEEECCC--
T ss_pred EEEeecCC-CCCcEEEeCCccccCCCCCHHHHHHHHHHHHHCCcccccEEEEEEEcCCCccccEEEEEEEEccccCCCCC
Confidence 99998765 36789999999999 9999999999999999999999888887665444443445677777543322111
Q ss_pred cCCccccceEEEEeHhhHhcCCCcc
Q 039665 217 QKQDSEIAAAQWMQAEDYAAQPYVL 241 (275)
Q Consensus 217 ~~~~~E~~~~~Wv~~eel~~~~~~~ 241 (275)
..+++|+.++.|++++++.++....
T Consensus 138 ~~~~~E~~~~~Wv~~~el~~~~~~~ 162 (207)
T 1mk1_A 138 AHHEEADMTMGWYPIAEAARRVLRG 162 (207)
T ss_dssp --------CEEEEEHHHHHHHHHTT
T ss_pred CCCCCceEEEEEEEHHHHHHHHHcC
Confidence 2456789999999999999875543
No 25
>2b0v_A Nudix hydrolase; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG, U function; 1.55A {Nitrosomonas europaea} SCOP: d.113.1.1
Probab=99.84 E-value=5.1e-20 Score=147.30 Aligned_cols=130 Identities=21% Similarity=0.192 Sum_probs=93.1
Q ss_pred eeEEEEEEEeCCceEEEEEEecCCCCCCCceeCcceeccCCCCHHHHHHHHHHHHhCCCcceeEEEEEEeeeccc--cce
Q 039665 123 RVGVGAFVMNNKRELLVVQENNGALKGTGVWKLPTGTIEEGEDICAAAVREVKEETGIDTEFVEVLAFRQSHRSF--FRK 200 (275)
Q Consensus 123 ~v~v~~vv~~~~~~vLLv~r~~~~~~~~~~w~lPgG~ve~gEs~~~aA~REl~EEtGl~~~~~~~l~~~~~~~~~--~~~ 200 (275)
+++|++++. .+++|||++|.+.+. ++.|.||||++++||++.+||+||++||||+.+....+++........ ...
T Consensus 8 ~~~v~~ii~-~~~~vLl~~r~~~~~--~~~w~lPgG~ve~gE~~~~aa~RE~~EEtGl~~~~~~~~~~~~~~~~~~~~~~ 84 (153)
T 2b0v_A 8 NVTVAAVIE-QDDKYLLVEEIPRGT--AIKLNQPAGHLEPGESIIQACSREVLEETGHSFLPEVLTGIYHWTCASNGTTY 84 (153)
T ss_dssp EEEEEEECE-ETTEEEEEEECSSSS--CCEEECSEEECCTTSCHHHHHHHHHHHHHSEEEEEEEEEEEEEEEETTTTEEE
T ss_pred CEEEEEEEe-eCCEEEEEEEcCCCC--CCeEECCCcCcCCCCCHHHHHHHHHHHhhCcEeccceEEEEEEEeCCCCCcEE
Confidence 455655554 578999999986542 789999999999999999999999999999999988888876433322 123
Q ss_pred EEEEEEEEEecCCccccCCccccceEEEEeHhhHhcCCCcccchHHHHHHHHHHhh
Q 039665 201 SDLFFVCMLRPRNFHIQKQDSEIAAAQWMQAEDYAAQPYVLKHQMFNYICQICLTK 256 (275)
Q Consensus 201 ~~~~f~~~~~~~~~~~~~~~~E~~~~~Wv~~eel~~~~~~~~~~~~~~~~~~~~~~ 256 (275)
..++|.|...... ....++.|+.+++|++++++.++......+.++.++..+++.
T Consensus 85 ~~~~f~~~~~~~~-~~~~~~~e~~~~~W~~~~el~~~~~~~~~~~~~~~l~~~~~~ 139 (153)
T 2b0v_A 85 LRFTFSGQVVSFD-PDRKLDTGIVRAAWFSIDEIRAKQAMHRTPLVMQCIEDYHAG 139 (153)
T ss_dssp EEEEEEEEEEEEC-TTSCCCTTEEEEEEEEHHHHHHTGGGBSSTHHHHHHHHHHTT
T ss_pred EEEEEEEEeCCCC-CCCCCCCCeeeEEEecHHHHhhhhcccCcHHHHHHHHHHHhC
Confidence 3445666544222 113356788999999999999973233344666777666643
No 26
>2fb1_A Conserved hypothetical protein; structural genomics, PSI, protein STRU initiative, midwest center for structural genomics, MCSG; 2.50A {Bacteroides thetaiotaomicron} SCOP: a.4.5.68 d.113.1.6
Probab=99.84 E-value=9.3e-21 Score=162.60 Aligned_cols=137 Identities=17% Similarity=0.291 Sum_probs=100.7
Q ss_pred CCCCCcceeEEEEEEE---eCCceEEEEEEecCCCCCCCceeCcceeccCCCCHHHHHHHHHHHHhCCCcceeEEEEEEe
Q 039665 116 LPANASHRVGVGAFVM---NNKRELLVVQENNGALKGTGVWKLPTGTIEEGEDICAAAVREVKEETGIDTEFVEVLAFRQ 192 (275)
Q Consensus 116 ~p~~~~~~v~v~~vv~---~~~~~vLLv~r~~~~~~~~~~w~lPgG~ve~gEs~~~aA~REl~EEtGl~~~~~~~l~~~~ 192 (275)
++.+..+.++|+++|+ +++++|||++|.+.+ ..|.|.||||++++||++.+||+||++||||+.+..++.++.+.
T Consensus 6 ~~~~~~p~v~v~~vi~~~~~~~~~vLLv~r~~~~--~~g~w~lPGG~ve~gEs~~~Aa~REl~EEtGl~~~~~~~l~~~~ 83 (226)
T 2fb1_A 6 YSSNPTFYLGIDCIIFGFNEGEISLLLLKRNFEP--AMGEWSLMGGFVQKDESVDDAAKRVLAELTGLENVYMEQVGAFG 83 (226)
T ss_dssp TTTSCCEEEEEEEEEEEEETTEEEEEEEECSSSS--STTCEECEEEECCTTSCHHHHHHHHHHHHHCCCSCEEEEEEEEC
T ss_pred cccCCCCeEEEEEEEEEEeCCCCEEEEEECcCCC--CCCCEECCeeccCCCCCHHHHHHHHHHHHHCCCCCceEEEEEeC
Confidence 4455577888998888 456899999998643 56899999999999999999999999999999999888888775
Q ss_pred eeccc--cceEEEEEEEEEecCCccccCCccccceEEEEeHhhHhcCCCcccchHHHHHHHHHHhhc
Q 039665 193 SHRSF--FRKSDLFFVCMLRPRNFHIQKQDSEIAAAQWMQAEDYAAQPYVLKHQMFNYICQICLTKS 257 (275)
Q Consensus 193 ~~~~~--~~~~~~~f~~~~~~~~~~~~~~~~E~~~~~Wv~~eel~~~~~~~~~~~~~~~~~~~~~~~ 257 (275)
..... .....++|+|.... .....+++|+.++.|++++++.++.+.+ ..++...+..+.+++
T Consensus 84 ~~~r~~~~~~v~~~y~a~~~~--~~~~~~~~e~~~~~W~~~~el~~l~~dh-~~il~~a~~rlr~~~ 147 (226)
T 2fb1_A 84 AIDRDPGERVVSIAYYALINI--NEYDRELVQKHNAYWVNINELPALIFDH-PEMVDKAREMMKQKA 147 (226)
T ss_dssp CTTSSSSSCEEEEEEEEECCT--TSSCHHHHHHTTEEEEETTSCCCBSTTH-HHHHHHHHHHHHHHH
T ss_pred CCCcCCCceEEEEEEEEEecC--cccccCCccccceEEEEHHHhhhccCCH-HHHHHHHHHHHHhhc
Confidence 43322 12334456665432 2222345788999999999999887764 245555555554443
No 27
>3oga_A Nucleoside triphosphatase NUDI; salmonella enterica subsp. enterica serovar typhimurium STR. unknown function; HET: PO4; 1.75A {Salmonella enterica subsp} PDB: 3n77_A
Probab=99.84 E-value=4.7e-20 Score=149.86 Aligned_cols=118 Identities=19% Similarity=0.243 Sum_probs=79.2
Q ss_pred eEEEEEEEeCCceEEEEEEecCCCCCCCceeCcceeccCCCCHHHHHHHHHHHHhCCCcceeEEEEEEe------eeccc
Q 039665 124 VGVGAFVMNNKRELLVVQENNGALKGTGVWKLPTGTIEEGEDICAAAVREVKEETGIDTEFVEVLAFRQ------SHRSF 197 (275)
Q Consensus 124 v~v~~vv~~~~~~vLLv~r~~~~~~~~~~w~lPgG~ve~gEs~~~aA~REl~EEtGl~~~~~~~l~~~~------~~~~~ 197 (275)
..+.+++++.+++|||++|.......++.|+||||++++||++.+||+||++||||+.+....+++... ..+..
T Consensus 28 ~~~~~~ii~~~~~vLL~~r~~~~~~~~g~w~lPgG~ve~gE~~~~aa~REl~EEtGl~~~~~~~~~~~~~~~~~~~~~~~ 107 (165)
T 3oga_A 28 RTIVCPLIQNDGCYLLCKMADNRGVFPGQWALSGGGVEPGERIEEALRREIREELGEQLILSDITPWTFRDDIRIKTYAD 107 (165)
T ss_dssp EEEEEEEEEETTEEEEEEECC------CCEECCCEECCTTCCHHHHHHHHHHHHHCSSCCEEEEEEEEEEEEEEEEEC--
T ss_pred EEEEEEEEeCCCEEEEEEecCCCCCCCCeEECCccccCCCCCHHHHHHHHHHHHhCCCccccceeeeeeecceeeEecCC
Confidence 345555666678999999875543467999999999999999999999999999999998777665321 12222
Q ss_pred cc---eEEEEEEEEEecCCccccCCccccceEEEEeHhhHhcCCCccc
Q 039665 198 FR---KSDLFFVCMLRPRNFHIQKQDSEIAAAQWMQAEDYAAQPYVLK 242 (275)
Q Consensus 198 ~~---~~~~~f~~~~~~~~~~~~~~~~E~~~~~Wv~~eel~~~~~~~~ 242 (275)
.. ...+++++.+......+. .++|+.+++|++++++.++++...
T Consensus 108 ~~~~~~~~~~~~~~~~~~~~~~~-~~~E~~~~~W~~~~el~~~~~~~~ 154 (165)
T 3oga_A 108 GRQEEIYMIYLIFDCVSANRDIC-INDEFQDYAWVKPEELALYDLNVA 154 (165)
T ss_dssp CCEEEEEEEEEEEEEEESCCCCC-CCTTEEEEEEECGGGGGGSCBCHH
T ss_pred CCceeEEEEEEEEEeeccCCCcc-CCchheeeEEccHHHHhhCCCCHH
Confidence 11 112222333333333333 347889999999999999887654
No 28
>1vhz_A ADP compounds hydrolase NUDE; structural genomics; HET: APR; 2.32A {Escherichia coli} SCOP: d.113.1.1 PDB: 1vhg_A*
Probab=99.84 E-value=2.1e-20 Score=157.16 Aligned_cols=115 Identities=17% Similarity=0.126 Sum_probs=92.6
Q ss_pred eEEEEEEEeCCceEEEEEEecCCCCCCCceeCcceeccCCCCHHHHHHHHHHHHhCCCcceeEEEEEEeeeccccceEEE
Q 039665 124 VGVGAFVMNNKRELLVVQENNGALKGTGVWKLPTGTIEEGEDICAAAVREVKEETGIDTEFVEVLAFRQSHRSFFRKSDL 203 (275)
Q Consensus 124 v~v~~vv~~~~~~vLLv~r~~~~~~~~~~w~lPgG~ve~gEs~~~aA~REl~EEtGl~~~~~~~l~~~~~~~~~~~~~~~ 203 (275)
.+|++++++++ +|||++|++.+. .++.|+||||++|+||++.+||+||++||||+.+..+..++.+...+.......+
T Consensus 50 ~av~vl~~~~~-~vLLvrq~r~~~-~~~~welPgG~ve~gEs~~~aA~REl~EEtGl~~~~~~~l~~~~~~~~~~~~~~~ 127 (198)
T 1vhz_A 50 EAVMIVPIVDD-HLILIREYAVGT-ESYELGFSKGLIDPGESVYEAANRELKEEVGFGANDLTFLKKLSMAPSYFSSKMN 127 (198)
T ss_dssp CEEEEEEEETT-EEEEEEEEETTT-TEEEEECEEEECCTTCCHHHHHHHHHHHHHSEEEEEEEEEEEEECCTTTCCCEEE
T ss_pred CEEEEEEEECC-EEEEEEcccCCC-CCcEEEeCcccCCCCcCHHHHHHHHHHHHHCCCcCceEEEEEEeCCCCccCcEEE
Confidence 45777778876 999999986543 5789999999999999999999999999999999989988887766665566677
Q ss_pred EEEEEEecCCccccCCccccceEEEEeHhhHhcCCCcc
Q 039665 204 FFVCMLRPRNFHIQKQDSEIAAAQWMQAEDYAAQPYVL 241 (275)
Q Consensus 204 ~f~~~~~~~~~~~~~~~~E~~~~~Wv~~eel~~~~~~~ 241 (275)
+|+|..... .....++.|..++.|++++++.++....
T Consensus 128 ~f~a~~~~~-~~~~~~~~E~~~~~w~~~~el~~~~~~~ 164 (198)
T 1vhz_A 128 IVVAQDLYP-ESLEGDEPEPLPQVRWPLAHMMDLLEDP 164 (198)
T ss_dssp EEEEEEEEE-CCCCCCCSSCCCEEEEEGGGGGGGGGCT
T ss_pred EEEEEeCCc-ccCCCCCCceEEEEEEEHHHHHHHHHcC
Confidence 888864322 2334567888999999999999886544
No 29
>2kdv_A RNA pyrophosphohydrolase; nudix family, magnesium, manganese, zinc; NMR {Escherichia coli} PDB: 2kdw_A
Probab=99.84 E-value=6.1e-20 Score=149.68 Aligned_cols=132 Identities=20% Similarity=0.312 Sum_probs=99.2
Q ss_pred cceeEEEEEEEeCCceEEEEEEecCCCCCCCceeCcceeccCCCCHHHHHHHHHHHHhCCCcceeEEEEEEee-----ec
Q 039665 121 SHRVGVGAFVMNNKRELLVVQENNGALKGTGVWKLPTGTIEEGEDICAAAVREVKEETGIDTEFVEVLAFRQS-----HR 195 (275)
Q Consensus 121 ~~~v~v~~vv~~~~~~vLLv~r~~~~~~~~~~w~lPgG~ve~gEs~~~aA~REl~EEtGl~~~~~~~l~~~~~-----~~ 195 (275)
..+.+|++++++.+++|||++|.. .+.|.||||++++||++.+||+||++||||+.+....+++.... .+
T Consensus 6 ~~~~~v~~~i~~~~~~vLl~~r~~-----~~~w~~p~G~~e~gE~~~~aa~RE~~EE~G~~~~~~~~~~~~~~~~~~~~~ 80 (164)
T 2kdv_A 6 GYRPNVGIVICNRQGQVMWARRFG-----QHSWQFPQGGINPGESAEQAMYRELFEEVGLSRKDVRILASTRNWLRYKLP 80 (164)
T ss_dssp SEEEEEEEEEECTTSEEEEEEETT-----CCCEECCEEECCTTCCHHHHHHHHHHHHHCCCGGGEEEEEECSSCEEEECC
T ss_pred CCCcEEEEEEEccCCEEEEEEEcC-----CCeEECCeeecCCCCCHHHHHHHHHHHHHCCCccceEEEEEecceeEEecC
Confidence 346678889999889999998872 57899999999999999999999999999999998888876532 11
Q ss_pred c----------ccceEEEEEEEEEecCCccccCC---ccccceEEEEeHhhHhcCCCcccchHHHHHHHHHHhhc
Q 039665 196 S----------FFRKSDLFFVCMLRPRNFHIQKQ---DSEIAAAQWMQAEDYAAQPYVLKHQMFNYICQICLTKS 257 (275)
Q Consensus 196 ~----------~~~~~~~~f~~~~~~~~~~~~~~---~~E~~~~~Wv~~eel~~~~~~~~~~~~~~~~~~~~~~~ 257 (275)
. ..+...++|+|.+......+.++ ..|+.+++|++++++.+........+++.++..+...+
T Consensus 81 ~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~l~~~~~~E~~~~~W~~~~e~~~~l~~~~~~~~~~~l~~l~~~l 155 (164)
T 2kdv_A 81 KRLVRWDTKPVCIGQKQKWFLLQLVSGDAEINMQTSSTPEFDGWRWVSYWYPVRQVVSFKRDVYRRVMKEFASVV 155 (164)
T ss_dssp TTTCCTTSSSCCCEEEEEEEEEEESSCGGGCCSCSSSSCSEEEEEEEETTTGGGGSCHHHHHHHHHHHHHHHHHH
T ss_pred cceeeeccCcccccceeEEEEEEecCCccccccCCCCCchhceEEEecHHHhhhhhhhhhHHHHHHHHHHHHHHH
Confidence 1 11235678888765444344443 35899999999999877655444567777777666544
No 30
>1sjy_A MUTT/nudix family protein; nudix fold, alpha-beta-alpha sandwich, structural genomics, BSGC structure funded by NIH; 1.39A {Deinococcus radiodurans} SCOP: d.113.1.1 PDB: 1soi_A 1su2_A* 1sz3_A*
Probab=99.84 E-value=3.2e-20 Score=149.46 Aligned_cols=119 Identities=27% Similarity=0.374 Sum_probs=92.5
Q ss_pred cceeEEEEEEEeCCceEEEEEEecC--CCCCCCceeCcceeccCCCCHHHHHHHHHHHHhCCCcceeEEEEEEeeeccc-
Q 039665 121 SHRVGVGAFVMNNKRELLVVQENNG--ALKGTGVWKLPTGTIEEGEDICAAAVREVKEETGIDTEFVEVLAFRQSHRSF- 197 (275)
Q Consensus 121 ~~~v~v~~vv~~~~~~vLLv~r~~~--~~~~~~~w~lPgG~ve~gEs~~~aA~REl~EEtGl~~~~~~~l~~~~~~~~~- 197 (275)
....++++++++.+++|||++|.+. ....++.|+||||++++||++.+||+||++||||+.+....+++........
T Consensus 11 ~~~~~~~~vi~~~~~~vLl~~r~~~~~~~~~~~~w~~PgG~ve~gE~~~~aa~RE~~EEtGl~~~~~~~l~~~~~~~~~~ 90 (159)
T 1sjy_A 11 VELRAAGVVLLNERGDILLVQEKGIPGHPEKAGLWHIPSGAVEDGENPQDAAVREACEETGLRVRPVKFLGAYLGRFPDG 90 (159)
T ss_dssp CCEEEEEEEEBCTTCCEEEEEESCC----CCCCCEECSEEECCTTSCHHHHHHHHHHHHHSCCEEEEEEEEEEEEECTTS
T ss_pred eEEEeEEEEEEeCCCCEEEEEecccCcCCCCCCeEECCccccCCCCCHHHHHHHHHHHHHCccceeeEEEEEEecccCCC
Confidence 3456788888888899999999852 2235689999999999999999999999999999999988888877654333
Q ss_pred cceEEEEEEEEEecCCcc-ccC-CccccceEEEEeHhhHhcCCCcc
Q 039665 198 FRKSDLFFVCMLRPRNFH-IQK-QDSEIAAAQWMQAEDYAAQPYVL 241 (275)
Q Consensus 198 ~~~~~~~f~~~~~~~~~~-~~~-~~~E~~~~~Wv~~eel~~~~~~~ 241 (275)
.....++|.|.... .. +.. +++|+.++.|++++++.++....
T Consensus 91 ~~~~~~~f~~~~~~--~~~~~~~~~~E~~~~~W~~~~el~~~~~~~ 134 (159)
T 1sjy_A 91 VLILRHVWLAEPEP--GQTLAPAFTDEIAEASFVSREDFAQLYAAG 134 (159)
T ss_dssp CEEEEEEEEEEECS--SCCCCCCCCSSEEEEEEECHHHHHHHHHTT
T ss_pred ceEEEEEEEEEccC--CCccccCCCCceeEEEEecHHHHHHhhhcc
Confidence 34556677776532 23 444 67789999999999999875544
No 31
>3son_A Hypothetical nudix hydrolase; structural genomics, joint center for structural GENO JCSG, protein structure initiative, PSI-biology; HET: MSE; 1.71A {Listeria monocytogenes}
Probab=99.84 E-value=2.7e-20 Score=148.63 Aligned_cols=125 Identities=16% Similarity=0.182 Sum_probs=86.4
Q ss_pred eEEEEEEE---eCCceEEEEEEecCCCCCCCceeCcceeccCCCCHHHHHHHHHHHHhCCCccee--EEEEEEee---e-
Q 039665 124 VGVGAFVM---NNKRELLVVQENNGALKGTGVWKLPTGTIEEGEDICAAAVREVKEETGIDTEFV--EVLAFRQS---H- 194 (275)
Q Consensus 124 v~v~~vv~---~~~~~vLLv~r~~~~~~~~~~w~lPgG~ve~gEs~~~aA~REl~EEtGl~~~~~--~~l~~~~~---~- 194 (275)
.+|.++++ +++++|||++|.+ .+.|.||||++++||++.+||+||++||||+.+... .+...... .
T Consensus 6 ~~v~vvi~~~~~~~~~vLl~~r~~-----~g~w~~PgG~ve~gE~~~~aa~REl~EEtGl~~~~~~~~~~~~~~~~~~~~ 80 (149)
T 3son_A 6 FQVLVIPFIKTEANYQFGVLHRTD-----ADVWQFVAGGGEDEEAISETAKRESIEELNLDVDVKMYSLDSHASIPNFHF 80 (149)
T ss_dssp CEEEEEEEEECSSSEEEEEEEESS-----SSCEECEEEECCTTCCHHHHHHHHHHHHHTCCSCCCEEEEEEEEEEEGGGT
T ss_pred eEEEEEEEEecCCCeEEEEEEEcC-----CCCEeCCccccCCCCCHHHHHHHHHHHHhCCCcccceEEEEeeecccceee
Confidence 45656665 4668999999984 389999999999999999999999999999998764 22222111 1
Q ss_pred --ccccceEEEEEEEEEecCCccccCCccccceEEEEeHhhHhcCCCcccchHHHHHHHHHHhhc
Q 039665 195 --RSFFRKSDLFFVCMLRPRNFHIQKQDSEIAAAQWMQAEDYAAQPYVLKHQMFNYICQICLTKS 257 (275)
Q Consensus 195 --~~~~~~~~~~f~~~~~~~~~~~~~~~~E~~~~~Wv~~eel~~~~~~~~~~~~~~~~~~~~~~~ 257 (275)
........++|+|......+.+.. ++|+.+++|++++++.++..... .+.++..+.+.+
T Consensus 81 ~~~~~~~~~~~~f~~~~~~~~~~~~~-~~E~~~~~W~~~~el~~~~~~~~---~~~~l~~~~~~l 141 (149)
T 3son_A 81 SFNKPYVVPEYCFAIDLTSCSYQVTL-SLEHSELRWVSYESAIQLLEWDS---NKTALYELNERL 141 (149)
T ss_dssp CSSSCSEEEEEEEEEECTTTGGGCCC-CTTEEEEEEECHHHHHHHCCCHH---HHHHHHHHHHHH
T ss_pred ccCCceEeEEEEEEEEcCCCCCcccC-CCceeeEEEeCHHHHHHHhcCHH---HHHHHHHHHHHH
Confidence 111234456677765433445544 58899999999999998876543 344455444444
No 32
>2yyh_A MUTT domain, 8-OXO-DGTPase domain; nudix family protein, structural genomics, NPPSFA, national on protein structural and functional analyses; 1.80A {Aquifex aeolicus}
Probab=99.83 E-value=7.8e-20 Score=144.29 Aligned_cols=113 Identities=14% Similarity=0.207 Sum_probs=86.9
Q ss_pred CcceeEEEEEEEe--CCce--EEEEEEecCCCCCCCceeCcceeccCCCCHHHHHHHHHHHHhCCCcceeEEEEEEeeec
Q 039665 120 ASHRVGVGAFVMN--NKRE--LLVVQENNGALKGTGVWKLPTGTIEEGEDICAAAVREVKEETGIDTEFVEVLAFRQSHR 195 (275)
Q Consensus 120 ~~~~v~v~~vv~~--~~~~--vLLv~r~~~~~~~~~~w~lPgG~ve~gEs~~~aA~REl~EEtGl~~~~~~~l~~~~~~~ 195 (275)
..+.++|+++|++ .+++ |||++|.+.+ +.|+||||++++||++.+||+||++||||+.+....+++.+....
T Consensus 6 ~~p~~~v~~vi~~~~~~~~~~vLl~~r~~~~----~~w~~PgG~ve~gE~~~~aa~RE~~EEtGl~~~~~~~~~~~~~~~ 81 (139)
T 2yyh_A 6 KTPLLATDVIIRLWDGENFKGIVLIERKYPP----VGLALPGGFVEVGERVEEAAAREMREETGLEVRLHKLMGVYSDPE 81 (139)
T ss_dssp CCCEEEEEEEEEEEETTEEEEEEEEEECSSS----CSEECCEEECCTTCCHHHHHHHHHHHHHCCCCEEEEEEEEECCTT
T ss_pred cCCeEEEEEEEEEEcCCCcEEEEEEEecCCC----CcEECccccCCCCCCHHHHHHHHHHHHHCCCcccceEEEEECCCC
Confidence 3456778888887 6788 9999997532 349999999999999999999999999999998888887665432
Q ss_pred cc--cceEEEEEEEEEecCCccccCCccccceEEEEeHhhHh--cCCCc
Q 039665 196 SF--FRKSDLFFVCMLRPRNFHIQKQDSEIAAAQWMQAEDYA--AQPYV 240 (275)
Q Consensus 196 ~~--~~~~~~~f~~~~~~~~~~~~~~~~E~~~~~Wv~~eel~--~~~~~ 240 (275)
.. .....++|+|... +.+. .++|+.+++|++++++. .+.++
T Consensus 82 ~~~~~~~~~~~f~~~~~---~~~~-~~~e~~~~~W~~~~el~~~~l~~~ 126 (139)
T 2yyh_A 82 RDPRAHVVSVVWIGDAQ---GEPK-AGSDAKKVKVYRLEEIPLDKLVFD 126 (139)
T ss_dssp SCTTSCEEEEEEEEEEE---SCCC-CCTTEEEEEEECTTSCCGGGBCTT
T ss_pred cCCCceEEEEEEEEecC---CccC-CCCCcceEEEEEHHHCCHhhcCCC
Confidence 21 3345667777662 2232 46788999999999999 66654
No 33
>3eds_A MUTT/nudix family protein; MUT/nudix protein, protein structure initiative II(PSI II), nysgxrc; 1.76A {Bacillus thuringiensis str} PDB: 3smd_A
Probab=99.83 E-value=3.8e-21 Score=154.71 Aligned_cols=114 Identities=25% Similarity=0.275 Sum_probs=80.8
Q ss_pred cceeEEEEEEEeCCceEEEEEEecCCCCCCCceeCcceeccCCCCHHHHHHHHHHHHhCCCcceeEEEEEEe-----eec
Q 039665 121 SHRVGVGAFVMNNKRELLVVQENNGALKGTGVWKLPTGTIEEGEDICAAAVREVKEETGIDTEFVEVLAFRQ-----SHR 195 (275)
Q Consensus 121 ~~~v~v~~vv~~~~~~vLLv~r~~~~~~~~~~w~lPgG~ve~gEs~~~aA~REl~EEtGl~~~~~~~l~~~~-----~~~ 195 (275)
....+|++++++.+++|||++|. .+.|.||||++++||++.+||+||++||||+.+....+++.+. ..+
T Consensus 19 ~~~~~v~~ii~~~~~~vLL~~r~------~~~w~lPgG~ve~gEs~~~aa~REl~EEtGl~~~~~~~~~~~~~~~~~~~~ 92 (153)
T 3eds_A 19 IFXPSVAAVIKNEQGEILFQYPG------GEYWSLPAGAIELGETPEEAVVREVWEETGLKVQVKKQKGVFGGKEYRYTY 92 (153)
T ss_dssp EEEEEEEEEEBCTTCCEEEECC---------CBBCSEEECCTTSCHHHHHHHHHHHHHCEEEEEEEEEEEECSGGGEEEC
T ss_pred EEeeeEEEEEEcCCCeEEEEEcC------CCcEECCccccCCCCCHHHHHHHHHHHHHCccceeeeEEEEecccceeeec
Confidence 34567888888888999998775 5789999999999999999999999999999999888888652 112
Q ss_pred cccc---eEEEEEEEEEecCCccccCCccccceEEEEeHhhHhcCCCccc
Q 039665 196 SFFR---KSDLFFVCMLRPRNFHIQKQDSEIAAAQWMQAEDYAAQPYVLK 242 (275)
Q Consensus 196 ~~~~---~~~~~f~~~~~~~~~~~~~~~~E~~~~~Wv~~eel~~~~~~~~ 242 (275)
.... ...++|.|... .+.+..+++|+.+++|++++++.++.++..
T Consensus 93 ~~~~~~~~~~~~f~~~~~--~~~~~~~~~E~~~~~W~~~~el~~l~~~~p 140 (153)
T 3eds_A 93 SNGDEVEYIVVVFECEVT--SGELRSIDGESLKLQYFSLSEKPPLALPYP 140 (153)
T ss_dssp TTSCEEEEEEEEEEEEEE--EECCC-------CEEEECGGGCCCBSSCCC
T ss_pred CCCCeEEEEEEEEEEEec--CCccccCCCcEEEEEEECHHHCchhcccCc
Confidence 2211 24456666543 334455678899999999999999877644
No 34
>3q1p_A Phosphohydrolase (MUTT/nudix family protein); asymmetric dimer, RNA exonuclease, CDP-CHO pyrophosphatase; 1.80A {Bacillus cereus} PDB: 3q4i_A
Probab=99.83 E-value=5.4e-20 Score=155.40 Aligned_cols=127 Identities=20% Similarity=0.307 Sum_probs=94.9
Q ss_pred CcceeEEEEEEEeCCceEEEEEEecCCCCCCCceeCcceeccCCCCHHHHHHHHHHHHhCCCcceeEEEEEEeeec----
Q 039665 120 ASHRVGVGAFVMNNKRELLVVQENNGALKGTGVWKLPTGTIEEGEDICAAAVREVKEETGIDTEFVEVLAFRQSHR---- 195 (275)
Q Consensus 120 ~~~~v~v~~vv~~~~~~vLLv~r~~~~~~~~~~w~lPgG~ve~gEs~~~aA~REl~EEtGl~~~~~~~l~~~~~~~---- 195 (275)
.+++++|+++|++ +++|||++|. ..|.|.||||++|+||++.+||+||++||||+.+....+++......
T Consensus 65 ~~~~~~v~~vv~~-~~~vLLv~r~-----~~g~w~lPgG~ve~gEs~~~aa~REl~EEtGl~v~~~~~l~~~~~~~~~~~ 138 (205)
T 3q1p_A 65 QTPKVDIRAVVFQ-NEKLLFVKEK-----SDGKWALPGGWADVGYTPTEVAAKEVFEETGYEVDHFKLLAIFDKEKHQPS 138 (205)
T ss_dssp CCCEEEEEEEEEE-TTEEEEEEC--------CCEECSEEECCTTCCHHHHHHHHHHHHHSEEEEEEEEEEEEEHHHHSCC
T ss_pred CCCcceEEEEEEE-CCEEEEEEEc-----CCCcEECCcCccCCCCCHHHHHHHHHHHHHCCccccceEEEEEeccccCCC
Confidence 3557788888988 6899999987 35799999999999999999999999999999999888888776432
Q ss_pred -cccceEEEEEEEEEecCCccccCCccccceEEEEeHhhHhcCCCcccchHHHHHHHHHHhhcc
Q 039665 196 -SFFRKSDLFFVCMLRPRNFHIQKQDSEIAAAQWMQAEDYAAQPYVLKHQMFNYICQICLTKSE 258 (275)
Q Consensus 196 -~~~~~~~~~f~~~~~~~~~~~~~~~~E~~~~~Wv~~eel~~~~~~~~~~~~~~~~~~~~~~~~ 258 (275)
...+...++|.|.... +.+.. +.|..+++|++++++.++..... .+..+..+++.+.
T Consensus 139 ~~~~~~~~~~~~~~~~~--~~~~~-~~E~~~~~w~~~~el~~l~~~~~---~~~~i~~~~~~~~ 196 (205)
T 3q1p_A 139 PSATHVYKIFIGCEIIG--GEKKT-SIETEEVEFFGENELPNLSIARN---TEDQIKEMFAYMK 196 (205)
T ss_dssp CCSSCEEEEEEEEEEEE--ECCCC-CTTSCCEEEECTTSCCCBCTTTC---CHHHHHHHHHHHH
T ss_pred CCCceEEEEEEEEEecC--CccCC-CCcceEEEEEeHHHhhhcCCCcc---HHHHHHHHHHHHh
Confidence 2234556777776643 23333 37899999999999998876554 3344555555443
No 35
>3shd_A Phosphatase NUDJ; nudix fold, nudix motif, hydrolase, (D)NDP/(D)NTP binding, dephosphorylation; 2.50A {Escherichia coli} PDB: 3dku_A
Probab=99.83 E-value=2.2e-19 Score=143.83 Aligned_cols=130 Identities=25% Similarity=0.365 Sum_probs=94.3
Q ss_pred ceeEEEEEEEeCCceEEEEEEecCCCCCCCceeCcceeccCCCCHHHHHHHHHHHHhCCCcceeEEEEEEeeecc-ccce
Q 039665 122 HRVGVGAFVMNNKRELLVVQENNGALKGTGVWKLPTGTIEEGEDICAAAVREVKEETGIDTEFVEVLAFRQSHRS-FFRK 200 (275)
Q Consensus 122 ~~v~v~~vv~~~~~~vLLv~r~~~~~~~~~~w~lPgG~ve~gEs~~~aA~REl~EEtGl~~~~~~~l~~~~~~~~-~~~~ 200 (275)
++++|++++.+ +++|||++|.. .+.+.|.||||++++||++.+||+||++||||+.+....+++....... ....
T Consensus 4 p~~~v~~ii~~-~~~vLl~~r~~---~~~~~w~~PgG~ve~gEs~~~aa~REl~EEtGl~~~~~~~~~~~~~~~~~~~~~ 79 (153)
T 3shd_A 4 PHVTVACVVHA-EGKFLVVEETI---NGKALWNQPAGHLEADETLVEAAARELWEETGISAQPQHFIRMHQWIAPDKTPF 79 (153)
T ss_dssp CEEEEEEEEEE-TTEEEEEEEEE---TTEEEEECSEEECCTTCCHHHHHHHHHHHHHCCCCCCCEEEEEEEECCTTSCCE
T ss_pred CceEEEEEEEe-CCEEEEEEecC---CCCCCEECCeEEeCCCCCHHHHHHHHHHHHHCcccccCcEEEEEEEecCCCceE
Confidence 35556555554 78999999973 2568999999999999999999999999999999998888887644333 3334
Q ss_pred EEEEEEEEEecCCccccCCccccceEEEEeHhhHhcCCCcccchHHHHHHHHHHhhc
Q 039665 201 SDLFFVCMLRPRNFHIQKQDSEIAAAQWMQAEDYAAQPYVLKHQMFNYICQICLTKS 257 (275)
Q Consensus 201 ~~~~f~~~~~~~~~~~~~~~~E~~~~~Wv~~eel~~~~~~~~~~~~~~~~~~~~~~~ 257 (275)
..++|+|...... ....++.|+.+++|++++++...+.. ..+.+...+..+++..
T Consensus 80 ~~~~f~~~~~~~~-~~~~~~~E~~~~~W~~~~el~~~~~~-~~~~~~~~l~~~~~~~ 134 (153)
T 3shd_A 80 LRFLFAIELEQIC-PTQPHDSDIDCCRWVSAEEILQASNL-RSPLVAESIRCYQSGQ 134 (153)
T ss_dssp EEEEEEEECSSCC-CCCCCSTTCCEEEEECHHHHHTCSCB-SSTHHHHHHHHHHHTC
T ss_pred EEEEEEEEccccC-cCCCCcccceeeEEecHHHhhccccc-cCchHHHHHHHHHhCC
Confidence 5567777554322 24456789999999999999433222 2335666676666543
No 36
>1nqz_A COA pyrophosphatase (MUTT/nudix family protein); D.radiodurans, hydrolase; 1.70A {Deinococcus radiodurans} SCOP: d.113.1.1 PDB: 1nqy_A
Probab=99.83 E-value=4.3e-20 Score=154.25 Aligned_cols=117 Identities=17% Similarity=0.161 Sum_probs=90.2
Q ss_pred cceeEEEEEEEeCCc--eEEEEEEecCCCCCCCceeCcceeccCCCCHHHHHHHHHHHHhCCCcceeEEEEEEeeecccc
Q 039665 121 SHRVGVGAFVMNNKR--ELLVVQENNGALKGTGVWKLPTGTIEEGEDICAAAVREVKEETGIDTEFVEVLAFRQSHRSFF 198 (275)
Q Consensus 121 ~~~v~v~~vv~~~~~--~vLLv~r~~~~~~~~~~w~lPgG~ve~gEs~~~aA~REl~EEtGl~~~~~~~l~~~~~~~~~~ 198 (275)
..+.++++++++.++ +|||++|.+.....++.|.||||++++||++.+||+||++||||+++.....++.........
T Consensus 32 ~~~~~~~~v~i~~~~~~~vLL~~r~~~~~~~~g~w~lPgG~ve~gEs~~~aa~REl~EEtGl~~~~~~~l~~~~~~~~~~ 111 (194)
T 1nqz_A 32 HYRRAAVLVALTREADPRVLLTVRSSELPTHKGQIAFPGGSLDAGETPTQAALREAQEEVALDPAAVTLLGELDDVFTPV 111 (194)
T ss_dssp -CEEEEEEEEEESSSSCBBCEEEEC------CCCEECSEEECCTTCCHHHHHHHHHHHHHCCCGGGCEEEEECCCEEETT
T ss_pred CCceEEEEEEEecCCCeEEEEEEecCCCCCCCCeEECCcccCCCCCCHHHHHHHHHHHHHCCCccceEEEEEccCccCCC
Confidence 455667777778777 899999976433367899999999999999999999999999999999999998877665555
Q ss_pred ceEEEEEEEEEecCCcc-ccCCccccceEEEEeHhhH-hcCC
Q 039665 199 RKSDLFFVCMLRPRNFH-IQKQDSEIAAAQWMQAEDY-AAQP 238 (275)
Q Consensus 199 ~~~~~~f~~~~~~~~~~-~~~~~~E~~~~~Wv~~eel-~~~~ 238 (275)
+...++|+|..... .. ...+++|+.++.|++++++ .+..
T Consensus 112 ~~~~~~f~~~~~~~-~~~~~~~~~E~~~~~W~~~~el~~~~~ 152 (194)
T 1nqz_A 112 GFHVTPVLGRIAPE-ALDTLRVTPEVAQIITPTLAELRAVPL 152 (194)
T ss_dssp TEEEEEEEEEECGG-GGGGCCCCTTEEEEECCBHHHHHHSCC
T ss_pred CeEEEEEEEEecCC-ccccCCCccceeEEEEEEHHHhccCCC
Confidence 66677888866422 22 4456789999999999999 7653
No 37
>3i9x_A MUTT/nudix family protein; structural genomics, hydrolase, PSI-2, protein structure INI NEW YORK SGX research center for structural genomics; 2.20A {Listeria innocua}
Probab=99.83 E-value=2.7e-20 Score=154.79 Aligned_cols=131 Identities=15% Similarity=0.180 Sum_probs=89.8
Q ss_pred eEEEEEEEe---C----CceEEEEEEec-----CCCCCCCceeCcceeccCCCCHHHHHHHHHHHHhCCCcceeEEEEEE
Q 039665 124 VGVGAFVMN---N----KRELLVVQENN-----GALKGTGVWKLPTGTIEEGEDICAAAVREVKEETGIDTEFVEVLAFR 191 (275)
Q Consensus 124 v~v~~vv~~---~----~~~vLLv~r~~-----~~~~~~~~w~lPgG~ve~gEs~~~aA~REl~EEtGl~~~~~~~l~~~ 191 (275)
++|+++|+. . +++|||++|.+ .....++.|.||||++++||++.+||+||++||||+.+....+++.+
T Consensus 28 ~~v~~vv~~~~~~~~~~~~~vLL~~r~~~~~~g~~~~~~g~w~lPGG~ve~gEs~~~aa~REl~EEtGl~~~~~~~l~~~ 107 (187)
T 3i9x_A 28 YTSDMILTTVKELNGKPTLHILLIKRSLTNAEGKPNMEGGKWAVPGGFVDENESAEQAAERELEEETSLTDIPLIPFGVF 107 (187)
T ss_dssp EEEEEEEEEEEEETTEEEEEEEEEECCSBCTTSSBCTTTTCEECSEEECCTTSCHHHHHHHHHHHHHCCCSCCCEEEEEE
T ss_pred ceEEEEEEEEcCCCCCCCCEEEEEEEccccccccCCCCCCEEECCceeCCCCCCHHHHHHHHHHHHHCCCCcceEEEEEE
Confidence 566666654 2 46899999953 11236799999999999999999999999999999999999999876
Q ss_pred eeecccc--ceEEEEEEEEEecCCccccCCccccceEEEEeHhhHhcCCCcccchHHHHHHHHHHhhc
Q 039665 192 QSHRSFF--RKSDLFFVCMLRPRNFHIQKQDSEIAAAQWMQAEDYAAQPYVLKHQMFNYICQICLTKS 257 (275)
Q Consensus 192 ~~~~~~~--~~~~~~f~~~~~~~~~~~~~~~~E~~~~~Wv~~eel~~~~~~~~~~~~~~~~~~~~~~~ 257 (275)
....... .....+|++.............+|+.+++|++++++..+.+.... +.++..+++++
T Consensus 108 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~~~W~~~~el~~~~l~~~~---~~il~~a~~~l 172 (187)
T 3i9x_A 108 DKPGRDPRGWIISRAFYAIVPPEALEKRAAGDDAAEIGLFPMTEALELPLAFDH---LDMLKKAFSAI 172 (187)
T ss_dssp CCTTSSTTSSEEEEEEEEECCHHHHHHHHHSTTTTTEEEEEHHHHTTSCBSTTH---HHHHHHHHHHH
T ss_pred cCCccCCCCCEEEEEEEEEEcCcccCCcCCCCceeEEEEEeHHHcccCCCCccH---HHHHHHHHHHH
Confidence 5433221 123345555433221111234578889999999999987665543 34444444443
No 38
>1g0s_A Hypothetical 23.7 kDa protein in ICC-TOLC intergenic region; nudix fold, hydrolase; 1.90A {Escherichia coli} SCOP: d.113.1.1 PDB: 1g9q_A* 1ga7_A 1khz_A* 1viq_A
Probab=99.83 E-value=3.8e-20 Score=156.89 Aligned_cols=118 Identities=15% Similarity=0.078 Sum_probs=90.2
Q ss_pred eeEEEEEEEe-CCceEEEEEEecCCCC----CCCceeCcceeccCCCCHHHHHHHHHHHHhCCCcceeEEEEEEeeeccc
Q 039665 123 RVGVGAFVMN-NKRELLVVQENNGALK----GTGVWKLPTGTIEEGEDICAAAVREVKEETGIDTEFVEVLAFRQSHRSF 197 (275)
Q Consensus 123 ~v~v~~vv~~-~~~~vLLv~r~~~~~~----~~~~w~lPgG~ve~gEs~~~aA~REl~EEtGl~~~~~~~l~~~~~~~~~ 197 (275)
..+|++++++ .+++|||++|++.+.. +++.|+||||++|+||++.+||+||++||||+.+..+..++.+...++.
T Consensus 57 ~~av~vl~~~~~~~~vLLvrq~R~~~~~~~~~~~~welPgG~ve~gE~~~~aA~REl~EEtGl~~~~~~~l~~~~~~~g~ 136 (209)
T 1g0s_A 57 GHAAVLLPFDPVRDEVVLIEQIRIAAYDTSETPWLLEMVAGMIEEGESVEDVARREAIEEAGLIVKRTKPVLSFLASPGG 136 (209)
T ss_dssp CCEEEEEEEETTTTEEEEEEEECGGGGGGSSCSEEEECEEEECCTTCCHHHHHHHHHHHHHCCCCCCEEEEEEEESCTTT
T ss_pred CCEEEEEEEECCCCEEEEEEeecccCCCCCCCCeEEEeCcccCCCCcCHHHHHHHHHHHHcCcccCcEEEeEEEecCCCc
Confidence 3468888898 5789999998865432 2578999999999999999999999999999999989888877666665
Q ss_pred cceEEEEEEEEEecC--Cc-cccCCccccceEEEEeHhhHhcCCCc
Q 039665 198 FRKSDLFFVCMLRPR--NF-HIQKQDSEIAAAQWMQAEDYAAQPYV 240 (275)
Q Consensus 198 ~~~~~~~f~~~~~~~--~~-~~~~~~~E~~~~~Wv~~eel~~~~~~ 240 (275)
.+...++|+|..... .. ....+++|..++.|++++++.++...
T Consensus 137 ~~~~~~~f~a~~~~~~~~~~~~~~~e~E~~~~~w~~~~el~~~i~~ 182 (209)
T 1g0s_A 137 TSERSSIMVGEVDATTASGIHGLADENEDIRVHVVSREQAYQWVEE 182 (209)
T ss_dssp BCCEEEEEEEECCGGGCC--------CCSCEEEEEEHHHHHHHHHT
T ss_pred cCcEEEEEEEEEccccccCCCCCCCCCcEEEEEEEEHHHHHHHHHc
Confidence 566778888865321 11 12346678899999999999887444
No 39
>3cng_A Nudix hydrolase; structural genomics, APC7497, PSI-2, protei structure initiative; 2.00A {Nitrosomonas europaea atcc 19718}
Probab=99.83 E-value=1.2e-19 Score=151.21 Aligned_cols=113 Identities=19% Similarity=0.298 Sum_probs=87.4
Q ss_pred cceeEEEEEEEeCCceEEEEEEecCCCCCCCceeCcceeccCCCCHHHHHHHHHHHHhCCCcceeEEEEEEeeeccccce
Q 039665 121 SHRVGVGAFVMNNKRELLVVQENNGALKGTGVWKLPTGTIEEGEDICAAAVREVKEETGIDTEFVEVLAFRQSHRSFFRK 200 (275)
Q Consensus 121 ~~~v~v~~vv~~~~~~vLLv~r~~~~~~~~~~w~lPgG~ve~gEs~~~aA~REl~EEtGl~~~~~~~l~~~~~~~~~~~~ 200 (275)
.++++|++++++ +++|||++|.+.+ ..+.|+||||++++||++.+||+||++||||+.+....++++... .....
T Consensus 38 ~~~~~v~~ii~~-~~~vLL~~r~~~~--~~g~w~lPgG~ve~gEs~~~aa~REl~EEtGl~~~~~~~~~~~~~--~~~~~ 112 (189)
T 3cng_A 38 NPKVIVGCIPEW-ENKVLLCKRAIAP--YRGKWTLPAGFMENNETLVQGAARETLEEANARVEIRELYAVYSL--PHISQ 112 (189)
T ss_dssp CCEEEEEEEEEE-TTEEEEEEESSSS--STTCEECSEEECCTTCCHHHHHHHHHHHHHCCCEEEEEEEEEEEE--GGGTE
T ss_pred CCceEEEEEEEe-CCEEEEEEccCCC--CCCeEECceeeccCCCCHHHHHHHHHHHHHCCccccceeEEEEec--CCCcE
Confidence 456678888888 7899999998654 368999999999999999999999999999999987777766433 22356
Q ss_pred EEEEEEEEEecCCccccCCccccceEEEEeHhhHh--cCCCcc
Q 039665 201 SDLFFVCMLRPRNFHIQKQDSEIAAAQWMQAEDYA--AQPYVL 241 (275)
Q Consensus 201 ~~~~f~~~~~~~~~~~~~~~~E~~~~~Wv~~eel~--~~~~~~ 241 (275)
..++|++.... ..+. .++|+.+++|++++++. .+.++.
T Consensus 113 ~~~~f~~~~~~--~~~~-~~~E~~~~~W~~~~el~~~~l~~~~ 152 (189)
T 3cng_A 113 VYMLFRAKLLD--LDFF-PGIESLEVRLFGEQEIPWNDIAFRV 152 (189)
T ss_dssp EEEEEEEEECC--SCCC-CCTTEEEEEEECTTTCCGGGBSCHH
T ss_pred EEEEEEEEeCC--CccC-CCccceeEEEECHHHcCcccccChH
Confidence 66777776543 2332 36788999999999998 454443
No 40
>3f6a_A Hydrolase, nudix family; protein structure initiative II(PSI II), NYSGXRC, structural genomics; 2.02A {Clostridium perfringens atcc 13124}
Probab=99.83 E-value=1e-19 Score=147.03 Aligned_cols=124 Identities=18% Similarity=0.233 Sum_probs=89.4
Q ss_pred eeEEEEEEEeCCceEEEEEEecCCCCCCCceeCcceeccCCCCHHHHHHHHHHHHhCCCcceeEEEEEEee---------
Q 039665 123 RVGVGAFVMNNKRELLVVQENNGALKGTGVWKLPTGTIEEGEDICAAAVREVKEETGIDTEFVEVLAFRQS--------- 193 (275)
Q Consensus 123 ~v~v~~vv~~~~~~vLLv~r~~~~~~~~~~w~lPgG~ve~gEs~~~aA~REl~EEtGl~~~~~~~l~~~~~--------- 193 (275)
.++|+++|++ +++|||++|++ .+.|.||||++++||++.+||+||++||||+.+.....++....
T Consensus 6 ~~~v~~vi~~-~~~vLL~~r~~-----~g~w~lPgG~ve~gEs~~~aa~REl~EEtGl~~~~~~~~~~~~~~~~~~~~~~ 79 (159)
T 3f6a_A 6 HFTVSVFIVC-KDKVLLHLHKK-----AKKMLPLGGHIEVNELPEEACIREAKEEAGLNVTLYNPIDINLKKSCDLSGEK 79 (159)
T ss_dssp CEEEEEEEEE-TTEEEEEECSS-----SCCEECEEEECCTTCCHHHHHHHHHHHHHCCCCEECCCCCHHHHHHHHHTTCE
T ss_pred eEEEEEEEEE-CCEEEEEEcCC-----CCeEECCccCccCCCCHHHHHHHHHHHHhCCCceecccccccccccccccccc
Confidence 4567788888 68999999873 57899999999999999999999999999999887766642100
Q ss_pred ------------eccccceEEEEEEEEEecCCccccCCccccceEEEEeHhhHhcCCCcccchHHHHHHHHHHhh
Q 039665 194 ------------HRSFFRKSDLFFVCMLRPRNFHIQKQDSEIAAAQWMQAEDYAAQPYVLKHQMFNYICQICLTK 256 (275)
Q Consensus 194 ------------~~~~~~~~~~~f~~~~~~~~~~~~~~~~E~~~~~Wv~~eel~~~~~~~~~~~~~~~~~~~~~~ 256 (275)
.........++|+|... .+.+..+++|..+++|++++++.++++... .+..+.+.+...
T Consensus 80 ~~~~p~~~~~~~~~~~~~~~~~~f~~~~~--~~~~~~~~~E~~~~~W~~~~el~~~~~~~~--~~~~l~~~~~~~ 150 (159)
T 3f6a_A 80 LLINPIHTILGDVSPNHSHIDFVYYATTT--SFETSPEIGESKILKWYSKEDLKNAHNIQE--NILVMATEALDL 150 (159)
T ss_dssp EECCCSEEEEECSSSSSCEEEEEEEEECS--CSCCCCCTTSCCCEEEECSSSSTTCSSSCH--HHHHHHHHHHHH
T ss_pred cccCccccccccCCCCceEEEEEEEEEeC--CCCcCCCCCcccceEEeeHHHHhhCcCCCh--hHHHHHHHHHHH
Confidence 00111233356666443 344555678999999999999999875433 355555555544
No 41
>2o1c_A DATP pyrophosphohydrolase; nudix NTP hydrolase NTP pyrophosphohydrolase MUTT dihydroneo triphosphate pyrophosphohydrolase folate biosynthesis; 1.80A {Escherichia coli} PDB: 2o5w_A
Probab=99.82 E-value=1.5e-19 Score=143.67 Aligned_cols=124 Identities=23% Similarity=0.321 Sum_probs=89.6
Q ss_pred eeEEEEEEEeCC-ceEEEEEEecCCCCCCCceeCcceeccCCCCHHHHHHHHHHHHhCCCccee--EEEEEEeee-----
Q 039665 123 RVGVGAFVMNNK-RELLVVQENNGALKGTGVWKLPTGTIEEGEDICAAAVREVKEETGIDTEFV--EVLAFRQSH----- 194 (275)
Q Consensus 123 ~v~v~~vv~~~~-~~vLLv~r~~~~~~~~~~w~lPgG~ve~gEs~~~aA~REl~EEtGl~~~~~--~~l~~~~~~----- 194 (275)
.++|++++++.+ +++||++|... +|.|.||||++++||++.+||+||++||||+.+... .+++.....
T Consensus 9 ~~~v~~~i~~~~~~~vLl~~r~~~----~g~w~~PgG~ve~gE~~~~aa~RE~~EEtGl~~~~~~~~~~~~~~~~~~~~~ 84 (150)
T 2o1c_A 9 PVSILVVIYAQDTKRVLMLQRRDD----PDFWQSVTGSVEEGETAPQAAMREVKEEVTIDVVAEQLTLIDCQRTVEFEIF 84 (150)
T ss_dssp SEEEEEEEEETTTCEEEEEECSSS----TTCEESEEEECCTTCCHHHHHHHHHHHHHCCCHHHHTCCEEEEEEEEEEECC
T ss_pred ceEEEEEEEeCCCCEEEEEEecCC----CCceECCccccCCCCCHHHHHHHHHHHHhCCCccccceeEEeeeceeeeeee
Confidence 467888999864 89999998742 579999999999999999999999999999998763 455433211
Q ss_pred ------c--cccceEEEEEEEEEecCCccccCCccccceEEEEeHhhHhcCCCcccchHHHHHHHHHHhh
Q 039665 195 ------R--SFFRKSDLFFVCMLRPRNFHIQKQDSEIAAAQWMQAEDYAAQPYVLKHQMFNYICQICLTK 256 (275)
Q Consensus 195 ------~--~~~~~~~~~f~~~~~~~~~~~~~~~~E~~~~~Wv~~eel~~~~~~~~~~~~~~~~~~~~~~ 256 (275)
+ .......++|.|..... .. ....|+.+++|++++++.++.+... .+.+++.++++
T Consensus 85 ~~~~~~~~~~~~~~~~~~f~~~~~~~--~~-~~~~E~~~~~W~~~~el~~~~~~~~---~~~~l~~~~~~ 148 (150)
T 2o1c_A 85 SHLRHRYAPGVTRNTESWFCLALPHE--RQ-IVFTEHLAYKWLDAPAAAALTKSWS---NRQAIEQFVIN 148 (150)
T ss_dssp GGGGGGBCTTCCEEEEEEEEEEESSC--CC-CCCSSSSCEEEEEHHHHHHHCSCHH---HHHHHHHHTTC
T ss_pred cccccccCCCCcceEEEEEEEEcCCC--CC-cChhHhhccEeecHHHHHhhhcCHH---HHHHHHHHHHh
Confidence 0 11234556777765422 21 2347889999999999999876543 55666665544
No 42
>3q93_A 7,8-dihydro-8-oxoguanine triphosphatase; structural genomics, structural genomics consortium, SGC, NU MUTT-like, hydrolase, magnesium binding; 1.80A {Homo sapiens} PDB: 1iry_A 3zr0_A* 3zr1_A
Probab=99.82 E-value=1.9e-19 Score=148.41 Aligned_cols=126 Identities=19% Similarity=0.211 Sum_probs=92.1
Q ss_pred cceeEEEEEEEeCCceEEEEEEecCCCCCCCceeCcceeccCCCCHHHHHHHHHHHHhCCCcceeEEEEEEeeeccccc-
Q 039665 121 SHRVGVGAFVMNNKRELLVVQENNGALKGTGVWKLPTGTIEEGEDICAAAVREVKEETGIDTEFVEVLAFRQSHRSFFR- 199 (275)
Q Consensus 121 ~~~v~v~~vv~~~~~~vLLv~r~~~~~~~~~~w~lPgG~ve~gEs~~~aA~REl~EEtGl~~~~~~~l~~~~~~~~~~~- 199 (275)
.+++++ +++++.+++|||++|.+.. +.+.|.||||++++||++.+||+||++||||+.+.....++..........
T Consensus 23 ~~~~~~-~~vi~~~~~vLL~~r~~~~--~~g~W~lPgG~ve~gEs~~~aa~REl~EEtGl~~~~~~~l~~~~~~~~~~~~ 99 (176)
T 3q93_A 23 ASRLYT-LVLVLQPQRVLLGMKKRGF--GAGRWNGFGGKVQEGETIEDGARRELQEESGLTVDALHKVGQIVFEFVGEPE 99 (176)
T ss_dssp CEEEEE-EEEEECSSEEEEEEECSST--TTTSEECEEEECCTTSCHHHHHHHHHHHHHSCEESCCEEEEEEEEEETTCSC
T ss_pred CCcEEE-EEEEEeCCEEEEEEEcCCC--CCCeEECceecCCCCCCHHHHHHHHHHHHHCCcceeeEEEEEEEEEcCCCCc
Confidence 455544 4556668899999987543 679999999999999999999999999999999998999888765554322
Q ss_pred -eEEEEEEEEEecCCccccCCccccceEEEEeHhhHhcCCCcccchHHHHHHHHHHhh
Q 039665 200 -KSDLFFVCMLRPRNFHIQKQDSEIAAAQWMQAEDYAAQPYVLKHQMFNYICQICLTK 256 (275)
Q Consensus 200 -~~~~~f~~~~~~~~~~~~~~~~E~~~~~Wv~~eel~~~~~~~~~~~~~~~~~~~~~~ 256 (275)
...++|+|... .+.+ ...|..+++|++++++..+++... .+.++..+++.
T Consensus 100 ~~~~~~f~~~~~--~~~~--~~~e~~~~~W~~~~el~~~~~~~~---~~~~l~~~~~~ 150 (176)
T 3q93_A 100 LMDVHVFCTDSI--QGTP--VESDEMRPCWFQLDQIPFKDMWPD---DSYWFPLLLQK 150 (176)
T ss_dssp EEEEEEEEESCE--ESCC--CCCSSEEEEEEETTCCCGGGBCTT---HHHHHHHHHTT
T ss_pred EEEEEEEEEECC--CCCc--CCCcceeeEEeeHHHccccccCcc---hHHHHHHHHcC
Confidence 23455555322 2222 345667889999999998876655 35566666554
No 43
>2dsc_A ADP-sugar pyrophosphatase; nudix domain, ADPR, ADP-ribose pyrophosphatase, NUDT5, hydrolase; HET: APR; 2.00A {Homo sapiens} PDB: 2dsd_A* 3bm4_A* 2dsb_A 3aca_A* 3ac9_A* 3l85_A*
Probab=99.81 E-value=5.1e-20 Score=156.30 Aligned_cols=104 Identities=19% Similarity=0.232 Sum_probs=81.8
Q ss_pred ceEEEEEEecCCCCCCCceeCcceeccCCCCHHHHHHHHHHHHhCCCcceeEEEEEEeeeccccceEEEEEEEEEecCCc
Q 039665 135 RELLVVQENNGALKGTGVWKLPTGTIEEGEDICAAAVREVKEETGIDTEFVEVLAFRQSHRSFFRKSDLFFVCMLRPRNF 214 (275)
Q Consensus 135 ~~vLLv~r~~~~~~~~~~w~lPgG~ve~gEs~~~aA~REl~EEtGl~~~~~~~l~~~~~~~~~~~~~~~~f~~~~~~~~~ 214 (275)
++|||++|++.+. .++.|+||||++|+||++.+||+||++||||+.+....+++.....+...+...++|++.+.....
T Consensus 77 ~~vlLv~q~R~~~-~~~~welPgG~ve~gEs~~~aA~REl~EEtGl~~~~~~~l~~~~~~~~~~~~~~~~~~a~~~~~~~ 155 (212)
T 2dsc_A 77 ECIVLVKQFRPPM-GGYCIEFPAGLIDDGETPEAAALRELEEETGYKGDIAECSPAVCMDPGLSNCTIHIVTVTINGDDA 155 (212)
T ss_dssp CEEEEEEEEEGGG-TEEEEECCEEECCTTCCHHHHHHHHHHHHHCCCCEEEEECCCEESCTTTBCCEEEEEEEEEETTSG
T ss_pred cEEEEEEeecCCC-CCcEEECCccccCCCCCHHHHHHHHHHHHhCCCccceEEeccEEcCCCccCceEEEEEEEEeCccc
Confidence 5899999876542 467899999999999999999999999999999988877765555555555667778776543221
Q ss_pred -----cccCCccccceEEEEeHhhHhcCCC
Q 039665 215 -----HIQKQDSEIAAAQWMQAEDYAAQPY 239 (275)
Q Consensus 215 -----~~~~~~~E~~~~~Wv~~eel~~~~~ 239 (275)
....+++|..++.|++++++.++..
T Consensus 156 ~~~~~~~~~~~~E~~~~~w~~~~el~~~~~ 185 (212)
T 2dsc_A 156 ENARPKPKPGDGEFVEVISLPKNDLLQRLD 185 (212)
T ss_dssp GGSSCCCCCCTTCCCEEEEEEGGGHHHHHH
T ss_pred cccCCCCCCCCCceEEEEEEEHHHHHHHHH
Confidence 3345678999999999999988654
No 44
>1vk6_A NADH pyrophosphatase; 1790429, structural genomics, JCSG, PS protein structure initiative, joint center for structural G hydrolase; HET: MSE; 2.20A {Escherichia coli} SCOP: d.113.1.4 d.113.1.4 g.41.14.1 PDB: 2gb5_A
Probab=99.81 E-value=3.6e-19 Score=156.33 Aligned_cols=130 Identities=18% Similarity=0.216 Sum_probs=98.9
Q ss_pred cceeEEEEEEEeCCceEEEEEEecCCCCCCCceeCcceeccCCCCHHHHHHHHHHHHhCCCcceeEEEEEEeeeccccce
Q 039665 121 SHRVGVGAFVMNNKRELLVVQENNGALKGTGVWKLPTGTIEEGEDICAAAVREVKEETGIDTEFVEVLAFRQSHRSFFRK 200 (275)
Q Consensus 121 ~~~v~v~~vv~~~~~~vLLv~r~~~~~~~~~~w~lPgG~ve~gEs~~~aA~REl~EEtGl~~~~~~~l~~~~~~~~~~~~ 200 (275)
+..++|.+ +++.+++|||+||.+.+ .|.|.||||++|+||++++||+||++||||+++..+.+++.....+. +.
T Consensus 138 ~~~~~viv-~v~~~~~vLL~rr~~~~---~g~w~lPgG~vE~GEt~eeAa~REv~EEtGl~v~~~~~~~~~~~~~~--~~ 211 (269)
T 1vk6_A 138 QIAPCIIV-AIRRDDSILLAQHTRHR---NGVHTVLAGFVEVGETLEQAVAREVMEESGIKVKNLRYVTSQPWPFP--QS 211 (269)
T ss_dssp CCEEEEEE-EEEETTEEEEEEETTTC---SSCCBCEEEECCTTCCHHHHHHHHHHHHHCCEEEEEEEEEEEEEETT--EE
T ss_pred CCCcEEEE-EEEeCCEEEEEEecCCC---CCcEECCcCcCCCCCCHHHHHHHHHHHHhCceeeeEEEEEEEecCCC--CE
Confidence 34444544 44456899999998643 58999999999999999999999999999999998888887654433 34
Q ss_pred EEEEEEEEEecCCccccCCccccceEEEEeHhhHhcCCCcccchHHHHHHHHHHhhccCc
Q 039665 201 SDLFFVCMLRPRNFHIQKQDSEIAAAQWMQAEDYAAQPYVLKHQMFNYICQICLTKSEKE 260 (275)
Q Consensus 201 ~~~~f~~~~~~~~~~~~~~~~E~~~~~Wv~~eel~~~~~~~~~~~~~~~~~~~~~~~~~~ 260 (275)
..++|++.... .++..+++|+.+++|++++|+..++... .+.+.+++.+++.+++.
T Consensus 212 ~~~~f~a~~~~--~~~~~~~~E~~~~~W~~~~el~~l~~~~--si~~~li~~~l~~~r~~ 267 (269)
T 1vk6_A 212 LMTAFMAEYDS--GDIVIDPKELLEANWYRYDDLPLLPPPG--TVARRLIEDTVAMCRAE 267 (269)
T ss_dssp EEEEEEEEEEE--CCCCCCTTTEEEEEEEETTSCCSCCCTT--SHHHHHHHHHHHHHHHC
T ss_pred EEEEEEEEECC--CCcCCCCcceEEEEEEEHHHhhhcccCc--HHHHHHHHHHHHHHHhh
Confidence 56677776543 3455667899999999999999886644 36777777777666543
No 45
>3fcm_A Hydrolase, nudix family; protein structure initiative II(PSI II), NYSGXRC, 11180J, structural genomics; 2.20A {Clostridium perfringens atcc 13124}
Probab=99.81 E-value=4.4e-19 Score=148.67 Aligned_cols=131 Identities=17% Similarity=0.252 Sum_probs=83.2
Q ss_pred eeEEEEEEEeCCc-eEEEEEEecCCCCCCCceeCcceeccCCCCHHHHHHHHHHHHhCCC-ccee----EEEEEEeeecc
Q 039665 123 RVGVGAFVMNNKR-ELLVVQENNGALKGTGVWKLPTGTIEEGEDICAAAVREVKEETGID-TEFV----EVLAFRQSHRS 196 (275)
Q Consensus 123 ~v~v~~vv~~~~~-~vLLv~r~~~~~~~~~~w~lPgG~ve~gEs~~~aA~REl~EEtGl~-~~~~----~~l~~~~~~~~ 196 (275)
.++++++|++.++ +|||++++ ..+.|.||||++|+||++.+||+||++||||+. +... ..+........
T Consensus 45 h~~~~~vv~~~~~~~vLL~~r~-----~~g~w~lPgG~ve~gEs~~eaa~REl~EEtGl~~~~~~~~~~~~~~~~~~~~~ 119 (197)
T 3fcm_A 45 HLTSSAFAVNKERNKFLMIHHN-----IYNSWAWTGGHSDNEKDQLKVAIKELKEETGVKNPTPLLDKAFALDVLTVNGH 119 (197)
T ss_dssp EEEEEEEEECTTSCEEEEEEET-----TTTEEECEEEECTTCCBHHHHHHHHHHHHHCCSSCEESCSSCSEEEEEEECCE
T ss_pred cEEEEEEEEECCCCEEEEEEec-----CCCCEECCccccCCCCCHHHHHHHHHHHHHCCCcccccCCCceEEEEeeecCc
Confidence 4567788888765 99999987 357999999999999999999999999999998 4421 11221111100
Q ss_pred --------ccceEEEEEEEEEecCCccccCCccccceEEEEeHhhHhcCCCcccchHHHHHHHHHHhhccCccC
Q 039665 197 --------FFRKSDLFFVCMLRPRNFHIQKQDSEIAAAQWMQAEDYAAQPYVLKHQMFNYICQICLTKSEKEYA 262 (275)
Q Consensus 197 --------~~~~~~~~f~~~~~~~~~~~~~~~~E~~~~~Wv~~eel~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 262 (275)
......++|++.... ...+..+++|+.+++|++++++.++..... +..+++.+++++++.+.
T Consensus 120 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~E~~~~~W~~~~el~~~~~~~~---~~~il~~~~~~l~~~~~ 189 (197)
T 3fcm_A 120 IKRGKYVSSHLHLNLTYLIECSE-DETLMLKEDENSGVMWIPFNEISKYCSEPH---MIPIYEKLINKLKTQSK 189 (197)
T ss_dssp EETTEEECCEEEEEEEEEEECCT-TSCCCCCC----CEEEEEGGGHHHHCCCGG---GHHHHHHHHHHHHC---
T ss_pred cccCcccCCceeEEEEEEEEeCC-CcccCCCcccccceEEccHHHHHhhcCCHH---HHHHHHHHHHHHHhccc
Confidence 001122445554332 234455678999999999999998866544 33466666666655443
No 46
>3gz5_A MUTT/nudix family protein; DNA binding protein, nudix domain, WHTH domain; 2.20A {Shewanella oneidensis} PDB: 3gz6_A* 3gz8_A*
Probab=99.81 E-value=1.3e-19 Score=156.81 Aligned_cols=134 Identities=20% Similarity=0.331 Sum_probs=95.2
Q ss_pred cceeEEEEEEE---eCCceEEEEEEecCCCCCCCceeCcceeccC--CCCHHHHHHHHHHHHhCCCcceeEEEEEEeeec
Q 039665 121 SHRVGVGAFVM---NNKRELLVVQENNGALKGTGVWKLPTGTIEE--GEDICAAAVREVKEETGIDTEFVEVLAFRQSHR 195 (275)
Q Consensus 121 ~~~v~v~~vv~---~~~~~vLLv~r~~~~~~~~~~w~lPgG~ve~--gEs~~~aA~REl~EEtGl~~~~~~~l~~~~~~~ 195 (275)
.+.++|+++|+ +++++|||++|.+.+ ..|.|.||||++++ ||++.+||+||++||||+.+..++.++.+....
T Consensus 20 ~p~v~v~~vi~~~~~~~~~vLLv~R~~~~--~~g~W~lPGG~ve~~~gEs~~~AA~REl~EEtGl~~~~~~~l~~~~~~~ 97 (240)
T 3gz5_A 20 AQLLTVDAVLFTYHDQQLKVLLVQRSNHP--FLGLWGLPGGFIDETCDESLEQTVLRKLAEKTAVVPPYIEQLCTVGNNS 97 (240)
T ss_dssp -CEEEEEEEEEEEETTEEEEEEEECCSSS--STTCEECSEEECCTTTCSBHHHHHHHHHHHHHSSCCSEEEEEEEEEESS
T ss_pred CCccEEEEEEEEEeCCCcEEEEEECcCCC--CCCCEECCccccCCCCCcCHHHHHHHHHHHHHCCCCCceeeEEEeCCCc
Confidence 45677888887 345699999998543 57899999999999 999999999999999999999888888776543
Q ss_pred cc--cceEEEEEEEEEecCCccccCCccccceEEEEeHhhHhcCCCcccc-hHHHHHHHHHHhhcc
Q 039665 196 SF--FRKSDLFFVCMLRPRNFHIQKQDSEIAAAQWMQAEDYAAQPYVLKH-QMFNYICQICLTKSE 258 (275)
Q Consensus 196 ~~--~~~~~~~f~~~~~~~~~~~~~~~~E~~~~~Wv~~eel~~~~~~~~~-~~~~~~~~~~~~~~~ 258 (275)
.. .....++|+|.+.. .......+|+.++.|++++++...++...+ .++...++.+.+++.
T Consensus 98 r~~~~~~~~~~y~a~~~~--~~~~~~~~e~~~~~W~~~~el~~~~l~~dh~~il~~a~~rlr~kl~ 161 (240)
T 3gz5_A 98 RDARGWSVTVCYTALMSY--QACQIQIASVSDVKWWPLADVLQMPLAFDHLQLIEQARERLTQKAL 161 (240)
T ss_dssp SSTTSCEEEEEEEEECCH--HHHHHHHTTCTTEEEEEHHHHTTSCCSTTHHHHHHHHHHHHHHHHH
T ss_pred cCCCceEEEEEEEEEecc--cccCCCCCcccceEEecHHHcccCCcchhHHHHHHHHHHHHHHhcc
Confidence 22 22344556664432 222224578889999999999865554443 255555555544443
No 47
>1q27_A Putative nudix hydrolase DR0079; radiation resistance; NMR {Deinococcus radiodurans} SCOP: d.113.1.2 PDB: 2o5f_A
Probab=99.81 E-value=2.1e-19 Score=146.82 Aligned_cols=112 Identities=17% Similarity=0.202 Sum_probs=84.8
Q ss_pred eeEEEEEEEeCCceEEEEEEecCCCCCCCcee-CcceeccCCCCHHHHHHHHHHHHhCCCccee--EEEEEEeeeccccc
Q 039665 123 RVGVGAFVMNNKRELLVVQENNGALKGTGVWK-LPTGTIEEGEDICAAAVREVKEETGIDTEFV--EVLAFRQSHRSFFR 199 (275)
Q Consensus 123 ~v~v~~vv~~~~~~vLLv~r~~~~~~~~~~w~-lPgG~ve~gEs~~~aA~REl~EEtGl~~~~~--~~l~~~~~~~~~~~ 199 (275)
..++++++++.+++|||++|...+..++|.|+ ||||++++||++.+||+||++||||+.+... ..++.+..+.....
T Consensus 34 ~~~v~v~i~~~~~~vLl~~r~~~~~~~~g~w~~~PgG~ve~gEs~~~aa~REl~EEtGl~~~~~~l~~~~~~~~~~~~~~ 113 (171)
T 1q27_A 34 VRVVNAFLRNSQGQLWIPRRSPSKSLFPNALDVSVGGAVQSGETYEEAFRREAREELNVEIDALSWRPLASFSPFQTTLS 113 (171)
T ss_dssp CEEEEEEEEETTTEEEECCSCCSSSCCCCSCCCSEEEECSSSSCHHHHHHHHHHHHHSCTTSSSCEEEEEEECSSSSCCS
T ss_pred ceEEEEEEECCCCeEEEEEecCCCCCCCCccccccCccccCCCCHHHHHHHHHHHHHCCcccccceEEEEEEeccCCCCc
Confidence 44677888998899999998655444579999 9999999999999999999999999998774 45554441222222
Q ss_pred eEEEEEEEEEecCCccccCCccccceEEEEeHhhHhcC
Q 039665 200 KSDLFFVCMLRPRNFHIQKQDSEIAAAQWMQAEDYAAQ 237 (275)
Q Consensus 200 ~~~~~f~~~~~~~~~~~~~~~~E~~~~~Wv~~eel~~~ 237 (275)
...++|.|.. ...+..++.|+.+++|++++++.++
T Consensus 114 ~~~~~f~~~~---~~~~~~~~~E~~~~~W~~~~el~~~ 148 (171)
T 1q27_A 114 SFMCVYELRS---DATPIFNPNDISGGEWLTPEHLLAR 148 (171)
T ss_dssp SEEEEEEEEC---CCCCCSCTTTCSCCEEECHHHHHHH
T ss_pred cEEEEEEEEE---CCccccCchhhheEEEecHHHHHHH
Confidence 3556666654 3445556788999999999999854
No 48
>2azw_A MUTT/nudix family protein; MUTT/nudix ,enterococcus faecalis, structural genomics, PSI, structure initiative; HET: 1PE; 1.90A {Enterococcus faecalis} SCOP: d.113.1.1
Probab=99.81 E-value=3.3e-19 Score=141.68 Aligned_cols=122 Identities=21% Similarity=0.234 Sum_probs=87.7
Q ss_pred cceeEEEEEEEeC-CceEEEEEEecCCCCCCCceeCcceeccCCCCHHHHHHHHHHHHhCCCcceeEEEEEEeee-c--c
Q 039665 121 SHRVGVGAFVMNN-KRELLVVQENNGALKGTGVWKLPTGTIEEGEDICAAAVREVKEETGIDTEFVEVLAFRQSH-R--S 196 (275)
Q Consensus 121 ~~~v~v~~vv~~~-~~~vLLv~r~~~~~~~~~~w~lPgG~ve~gEs~~~aA~REl~EEtGl~~~~~~~l~~~~~~-~--~ 196 (275)
..+.+++++|+++ +++|||++|. .+.|.||||++++||++.+||+||++||||+.+.....++..... . .
T Consensus 16 ~~~~~~~~vi~~~~~~~vLl~~r~------~g~w~~PgG~ve~gE~~~~aa~RE~~EEtGl~~~~~~~~~~~~~~~~~~~ 89 (148)
T 2azw_A 16 QTRYAAYIIVSKPENNTMVLVQAP------NGAYFLPGGEIEGTETKEEAIHREVLEELGISVEIGCYLGEADEYFYSNH 89 (148)
T ss_dssp EECCEEEEECEEGGGTEEEEEECT------TSCEECSEEECCTTCCHHHHHHHHHHHHHSEEEEEEEEEEEEEEEEEETT
T ss_pred eeeeEEEEEEECCCCCeEEEEEcC------CCCEeCCCcccCCCCCHHHHHHHHHHHHhCCeeEeeeEEEEEEEEEcCCC
Confidence 4456788888886 7899999963 278999999999999999999999999999999888887764311 1 1
Q ss_pred ---ccceEEEEEEEEEecCCccccCCccccceEEEEeHhhHhcCCCcccchHHHHHHHHHH
Q 039665 197 ---FFRKSDLFFVCMLRPRNFHIQKQDSEIAAAQWMQAEDYAAQPYVLKHQMFNYICQICL 254 (275)
Q Consensus 197 ---~~~~~~~~f~~~~~~~~~~~~~~~~E~~~~~Wv~~eel~~~~~~~~~~~~~~~~~~~~ 254 (275)
......++|.|..... .. ...+|..+++|++++++.++..... .+.+++.++
T Consensus 90 ~~~~~~~~~~~~~~~~~~~--~~-~~~~e~~~~~W~~~~el~~~~~~~~---~~~~l~~~~ 144 (148)
T 2azw_A 90 RQTAYYNPGYFYVANTWRQ--LS-EPLERTNTLHWVAPEEAVRLLKRGS---HRWAVEKWL 144 (148)
T ss_dssp TTEEEEEEEEEEEEEEEEE--CS-SCC-CCSEEEEECHHHHHHHBSCHH---HHHHHHHHH
T ss_pred CCcceEEEEEEEEEEcCcC--Cc-CCCCceeeEEEeeHHHHHhhhcchh---HHHHHHHHH
Confidence 1223455666654322 22 2346778999999999998766443 445555544
No 49
>2pqv_A MUTT/nudix family protein; structu genomics, PSI-2, protein structure initiative, midwest CENT structural genomics, MCSG; 1.63A {Streptococcus pneumoniae}
Probab=99.81 E-value=1.6e-19 Score=144.99 Aligned_cols=119 Identities=18% Similarity=0.268 Sum_probs=85.8
Q ss_pred eeEEEEEEEeCCceEEEEEEecCCCCCCCceeCcceeccCCCCHHHHHHHHHHHHhCCCcceeEEEEEEeeeccccc---
Q 039665 123 RVGVGAFVMNNKRELLVVQENNGALKGTGVWKLPTGTIEEGEDICAAAVREVKEETGIDTEFVEVLAFRQSHRSFFR--- 199 (275)
Q Consensus 123 ~v~v~~vv~~~~~~vLLv~r~~~~~~~~~~w~lPgG~ve~gEs~~~aA~REl~EEtGl~~~~~~~l~~~~~~~~~~~--- 199 (275)
+++++++|++ +++|||++| ++.|.||||++++||++.+||+||++||||+.+....+++.........+
T Consensus 19 ~~~~~~ii~~-~~~vLl~~r-------~~~w~lPgG~ve~gE~~~~aa~REl~EEtGl~~~~~~~~~~~~~~~~~~~~~~ 90 (154)
T 2pqv_A 19 GVRATALIVQ-NHKLLVTKD-------KGKYYTIGGAIQVNESTEDAVVREVKEELGVKAQAGQLAFVVENRFEVDGVSY 90 (154)
T ss_dssp EEEEEECCEE-TTEEEEEEE-------TTEEECEEEECBTTCCHHHHHHHHHHHHHCCCEEEEEEEEEEEEEEEETTEEE
T ss_pred eEEEEEEEEE-CCEEEEEec-------CCeEECcccCcCCCCCHHHHHHHHHHHHhCCeeeeceEEEEEeeeecCCCCcc
Confidence 4567777777 689999998 36899999999999999999999999999999988887776543332222
Q ss_pred -eEEEEEEEEEecCCccccCCccccceEEEEeHhhHhcCCCcccchHHHHHHH
Q 039665 200 -KSDLFFVCMLRPRNFHIQKQDSEIAAAQWMQAEDYAAQPYVLKHQMFNYICQ 251 (275)
Q Consensus 200 -~~~~~f~~~~~~~~~~~~~~~~E~~~~~Wv~~eel~~~~~~~~~~~~~~~~~ 251 (275)
...++|+|...........+++|..+++|++++++.++++... ..+.++.
T Consensus 91 ~~~~~~f~~~~~~~~~~~~~~~~e~~~~~W~~~~el~~~~~~~~--~~~~~l~ 141 (154)
T 2pqv_A 91 HNIEFHYLVDLLEDAPLTMQEDEKRQPCEWIDLDKLQNIQLVPV--FLKTALP 141 (154)
T ss_dssp EEEEEEEEEEESSCCCSEEEETTEEEEEEEEEGGGGGGSCEEST--THHHHTT
T ss_pred eEEEEEEEEEecCCCCcccCCCCceeeEEEeEHHHHhhcCcCcH--HHHHHhh
Confidence 2334666655332211112356788999999999999876554 3444443
No 50
>3o8s_A Nudix hydrolase, ADP-ribose pyrophosphatase; structural genomics, joint center for structural genomics, J protein structure initiative; 2.27A {Streptococcus suis}
Probab=99.81 E-value=2.4e-19 Score=151.56 Aligned_cols=128 Identities=27% Similarity=0.450 Sum_probs=95.0
Q ss_pred CCcceeEEEEEEEeCCceEEEEEEecCCCCCCCceeCcceeccCCCCHHHHHHHHHHHHhCCCcceeEEEEEEeeecc--
Q 039665 119 NASHRVGVGAFVMNNKRELLVVQENNGALKGTGVWKLPTGTIEEGEDICAAAVREVKEETGIDTEFVEVLAFRQSHRS-- 196 (275)
Q Consensus 119 ~~~~~v~v~~vv~~~~~~vLLv~r~~~~~~~~~~w~lPgG~ve~gEs~~~aA~REl~EEtGl~~~~~~~l~~~~~~~~-- 196 (275)
+.+++++|+++|+++ ++|||++|. .+.|.||||++++||++.+||+||++||||+.+....+++.......
T Consensus 66 y~~~~~~v~~vv~~~-~~vLLvrr~------~g~w~lPgG~ve~gEs~~~aa~REl~EEtGl~~~~~~~l~~~~~~~~~~ 138 (206)
T 3o8s_A 66 YQTPKLDTRAAIFQE-DKILLVQEN------DGLWSLPGGWCDVDQSVKDNVVKEVKEEAGLDVEAQRVVAILDKHKNNP 138 (206)
T ss_dssp --CCEEEEEEEEEET-TEEEEEECT------TSCEECSEEECCTTSCHHHHHHHHHHHHHCEEEEEEEEEEEEEHHHHCC
T ss_pred CCCCCccEEEEEEEC-CEEEEEEec------CCeEECCeeccCCCCCHHHHHHHHHHHHHCCcceeeeEEEEEeccccCC
Confidence 345677888888884 899999976 47899999999999999999999999999999998888887652211
Q ss_pred ---ccceEEEEEEEEEecCCccccCCccccceEEEEeHhhHhcCCCcccchHHHHHHHHHHhhccC
Q 039665 197 ---FFRKSDLFFVCMLRPRNFHIQKQDSEIAAAQWMQAEDYAAQPYVLKHQMFNYICQICLTKSEK 259 (275)
Q Consensus 197 ---~~~~~~~~f~~~~~~~~~~~~~~~~E~~~~~Wv~~eel~~~~~~~~~~~~~~~~~~~~~~~~~ 259 (275)
......++|.|.... +.+.. +.|..+++|++++++.++..... ++..+..+++.++.
T Consensus 139 ~~~~~~~~~~~~~~~~~~--~~~~~-~~E~~~~~w~~~~el~~l~~~~~---~~~~l~~~~~~~~~ 198 (206)
T 3o8s_A 139 AKSAHRVTKVFILCRLLG--GEFQP-NSETVASGFFSLDDLPPLYLGKN---TAEQLALCLEASRS 198 (206)
T ss_dssp -----CEEEEEEEEEEEE--ECCCC-CSSCSEEEEECTTSCCCBCTTTC---CHHHHHHHHHHHHC
T ss_pred CCCCceEEEEEEEEEecC--CeecC-CCCceEEEEEeHHHhhhccCCCc---hHHHHHHHHHHHHC
Confidence 233455677776543 23332 37899999999999999877554 44555555555443
No 51
>3q91_A Uridine diphosphate glucose pyrophosphatase; structural genomics, structural genomics consortium, SGC, NU MUTT-like, hydrolase, magnesium binding; 2.70A {Homo sapiens}
Probab=99.81 E-value=8.3e-20 Score=155.78 Aligned_cols=118 Identities=17% Similarity=0.141 Sum_probs=87.6
Q ss_pred ceeEEEEEEEe-CCceEEEEEEecCCCC------------------------------CCCceeCcceeccC-CCCHHHH
Q 039665 122 HRVGVGAFVMN-NKRELLVVQENNGALK------------------------------GTGVWKLPTGTIEE-GEDICAA 169 (275)
Q Consensus 122 ~~v~v~~vv~~-~~~~vLLv~r~~~~~~------------------------------~~~~w~lPgG~ve~-gEs~~~a 169 (275)
+..+|++++++ .++++||++|+|.+.. .++.|+||||++|+ ||++.+|
T Consensus 35 ~~~aV~vl~~~~~~~~vlLvrQ~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~welPgG~ve~~gEs~~ea 114 (218)
T 3q91_A 35 THDSVTVLLFNSSRRSLVLVKQFRPAVYAGEVERRFPGSLAAVDQDGPRELQPALPGSAGVTVELCAGLVDQPGLSLEEV 114 (218)
T ss_dssp CCCEEEEEEEEGGGTEEEEEEEECHHHHHHHTC-------------------------CCEEEECEEEECCSSSCCHHHH
T ss_pred cCCeEEEEEEECCCCEEEEEEccccccccccccccccccccccccccccccccccccCCCeEEECCcceeCCCCCCHHHH
Confidence 34578889998 4689999999864321 15799999999999 9999999
Q ss_pred HHHHHHHHhCCCc--ceeEEEEEEeeeccccceEEEEEEEEEecC----CccccCCccccceEEEEeHhhHhcCCC
Q 039665 170 AVREVKEETGIDT--EFVEVLAFRQSHRSFFRKSDLFFVCMLRPR----NFHIQKQDSEIAAAQWMQAEDYAAQPY 239 (275)
Q Consensus 170 A~REl~EEtGl~~--~~~~~l~~~~~~~~~~~~~~~~f~~~~~~~----~~~~~~~~~E~~~~~Wv~~eel~~~~~ 239 (275)
|+||++||||+.+ ..+..++.+.......+...++|+|..... .+....+++|..++.|++++++.++..
T Consensus 115 A~REl~EEtGl~~~~~~l~~l~~~~~~~g~~~~~~~~f~a~~~~~~~~~~~~~~~d~~E~~ev~wv~l~el~~~i~ 190 (218)
T 3q91_A 115 ACKEAWEECGYHLAPSDLRRVATYWSGVGLTGSRQTMFYTEVTDAQRSGPGGGLVEEGELIEVVHLPLEGAQAFAD 190 (218)
T ss_dssp HHHHHHHHHCBCCCGGGCEEEEEEEEC---CCEEEEEEEEEECGGGBCC---------CCEEEEEEEGGGHHHHHH
T ss_pred HHHHHHHHhCCccccCceEEEEEEecCCCccceEEEEEEEEECCcccccCCCCCCCCCcEEEEEEEEHHHHHHHHH
Confidence 9999999999998 788888877766666677778888876432 123445678999999999999988643
No 52
>1x51_A A/G-specific adenine DNA glycosylase; nudix domain, DNA repair, alpha-3 isoform, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: d.113.1.3
Probab=99.80 E-value=4.1e-19 Score=142.87 Aligned_cols=127 Identities=15% Similarity=0.247 Sum_probs=92.7
Q ss_pred ceeEEEEEEEeC---CceEEEEEEecCCCCCCCceeCcceeccCCCCHH-HHHHHHHHHHhC-CCcceeEEEEEEeeecc
Q 039665 122 HRVGVGAFVMNN---KRELLVVQENNGALKGTGVWKLPTGTIEEGEDIC-AAAVREVKEETG-IDTEFVEVLAFRQSHRS 196 (275)
Q Consensus 122 ~~v~v~~vv~~~---~~~vLLv~r~~~~~~~~~~w~lPgG~ve~gEs~~-~aA~REl~EEtG-l~~~~~~~l~~~~~~~~ 196 (275)
++..+.++|.+. +++|||+||...+ .++|.|+||||.+++||++. +||+||++|||| +.+.....++.+.+.+.
T Consensus 18 ~~~~~~~vi~~~~~~~~~vLl~~R~~~~-~~~g~w~~PgG~~e~gE~~~~~a~~REl~EE~g~l~~~~~~~l~~~~~~~~ 96 (155)
T 1x51_A 18 EESSATCVLEQPGALGAQILLVQRPNSG-LLAGLWEFPSVTWEPSEQLQRKALLQELQRWAGPLPATHLRHLGEVVHTFS 96 (155)
T ss_dssp EEEEEEEEEEEECSSSEEEEEEECCCCS-TTCSCEECCEEECCSSHHHHHHHHHHHHHHHSCCCCSTTCEECCCBCCBCS
T ss_pred eEEEEEEEEEecCCCCCEEEEEECCCCC-CCCceecCCccccCCCCCHHHHHHHHHHHHHhCCcceeeeeecceEEEecC
Confidence 455565666664 5899999987554 36799999999999999996 999999999999 88877777765555555
Q ss_pred ccceEEEEEEEEEecCCccccCCccccceEEEEeHhhHhcCCCcccchHHHHHHHHHHhh
Q 039665 197 FFRKSDLFFVCMLRPRNFHIQKQDSEIAAAQWMQAEDYAAQPYVLKHQMFNYICQICLTK 256 (275)
Q Consensus 197 ~~~~~~~~f~~~~~~~~~~~~~~~~E~~~~~Wv~~eel~~~~~~~~~~~~~~~~~~~~~~ 256 (275)
.+....++|.|... ...+ ...|..++.|++++++.+++++.. ++.+++.+.+.
T Consensus 97 ~~~~~~~~~~~~~~--~~~~--~~~e~~~~~W~~~~el~~~~~~~~---~~~~l~~~~~~ 149 (155)
T 1x51_A 97 HIKLTYQVYGLALE--GQTP--VTTVPPGARWLTQEEFHTAAVSTA---MKKVFRVYQGQ 149 (155)
T ss_dssp SCEEEEEEEEEECS--SCCC--CCCCCTTEEEEEHHHHHHSCCCHH---HHHHHHHHHHT
T ss_pred CccEEEEEEEEEEc--CCCC--CCCCCCccEEccHHHhhhcCCCHH---HHHHHHHHHhc
Confidence 54455566766543 2222 335667899999999999877543 55666666553
No 53
>1mut_A MUTT, nucleoside triphosphate pyrophosphohydrolase; DNA repair; NMR {Escherichia coli} SCOP: d.113.1.1 PDB: 1ppx_A* 1pun_A* 1puq_A* 1pus_A* 1tum_A* 3a6s_A* 3a6t_A* 3a6u_A* 3a6v_A*
Probab=99.80 E-value=2.5e-20 Score=144.70 Aligned_cols=110 Identities=20% Similarity=0.259 Sum_probs=85.2
Q ss_pred EEEEeCCceEEEEEEecCCCCCCCceeCcceeccCCCCHHHHHHHHHHHHhCCCcceeEEEEEEeeeccccceEEEEEEE
Q 039665 128 AFVMNNKRELLVVQENNGALKGTGVWKLPTGTIEEGEDICAAAVREVKEETGIDTEFVEVLAFRQSHRSFFRKSDLFFVC 207 (275)
Q Consensus 128 ~vv~~~~~~vLLv~r~~~~~~~~~~w~lPgG~ve~gEs~~~aA~REl~EEtGl~~~~~~~l~~~~~~~~~~~~~~~~f~~ 207 (275)
+++++.+++|||+||.+.+ .++|.|+||||++++||++.+||+||++||||+.+.....++...+.........++|.|
T Consensus 9 ~ii~~~~~~vLl~~r~~~~-~~~g~w~~PgG~~e~gE~~~~aa~RE~~EE~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 87 (129)
T 1mut_A 9 GIIRNENNEIFITRRAADA-HMANKLEFPGGKIEMGETPEQAVVRELQEEVGITPQHFSLFEKLEYEFPDRHITLWFWLV 87 (129)
T ss_dssp EECEETTTEEEEEECSSCC-SSSCCEECCCCCSSSCSSTTHHHHHHHHTTTCCSSCEECCCCCCBCCCSSCEEECCCEEE
T ss_pred EEEEecCCEEEEEEeCCCC-CCCCeEECCccCcCCCCCHHHHHHHHHHHHhCCccccceEEEEEEEecCCceEEEEEEEE
Confidence 4566888999999998654 367999999999999999999999999999999988777766555444443334456666
Q ss_pred EEecCCccccCCccccceEEEEeHhhHhcCCCccc
Q 039665 208 MLRPRNFHIQKQDSEIAAAQWMQAEDYAAQPYVLK 242 (275)
Q Consensus 208 ~~~~~~~~~~~~~~E~~~~~Wv~~eel~~~~~~~~ 242 (275)
.... .. +...|..++.|++++++.+++++..
T Consensus 88 ~~~~--~~--~~~~e~~~~~W~~~~el~~~~~~~~ 118 (129)
T 1mut_A 88 ERWE--GE--PWGKEGQPGEWMSLVGLNADDFPPA 118 (129)
T ss_dssp EECS--SC--CCCCSSCCCEEEESSSCCTTTSCTT
T ss_pred EccC--Cc--cCCcccceeEEeCHHHcccccCCch
Confidence 5432 22 2456788999999999999887755
No 54
>3o6z_A GDP-mannose pyrophosphatase NUDK; nudix, hydrolase, biofilm; 2.05A {Escherichia coli} SCOP: d.113.1.1 PDB: 3o52_A* 1viu_A 3o69_A 3o61_A
Probab=99.80 E-value=1.7e-19 Score=150.69 Aligned_cols=115 Identities=13% Similarity=0.070 Sum_probs=88.5
Q ss_pred eEEEEEEEeC-CceEEEEEEecCCC----C-CCCceeCcceeccCCCCHHHHHHHHHHHHhCCCcceeEEEEEEeeeccc
Q 039665 124 VGVGAFVMNN-KRELLVVQENNGAL----K-GTGVWKLPTGTIEEGEDICAAAVREVKEETGIDTEFVEVLAFRQSHRSF 197 (275)
Q Consensus 124 v~v~~vv~~~-~~~vLLv~r~~~~~----~-~~~~w~lPgG~ve~gEs~~~aA~REl~EEtGl~~~~~~~l~~~~~~~~~ 197 (275)
.+|++++++. ++++||+++++.+. . +++.|+||||++| ||++.+||+||++||||+.+..+..++.+...+..
T Consensus 46 ~av~v~~~~~~~~~vlLv~~~r~~~~~~~~~~~~~w~lPgG~ve-gE~~~~aa~REl~EEtG~~~~~~~~l~~~~~~~~~ 124 (191)
T 3o6z_A 46 NGATILLYNTKKKTVVLIRQFRVATWVNGNESGQLIESCAGLLD-NDEPEVCIRKEAIEETGYEVGEVRKLFELYMSPGG 124 (191)
T ss_dssp CEEEEEEEETTTTEEEEEEEECHHHHTTTCTTCEEEECEEEECC-SSCHHHHHHHHHHHHC-CCCSCEEEEEEEESCTTT
T ss_pred CEEEEEEEECCCCEEEEEEcCCccccccCCCCCeEEEecceEeC-CCCHHHHHHHHHHHHhCCccCcEEEEEEEEeCCCc
Confidence 4677888884 68999999986321 0 4678999999999 99999999999999999999989999887777766
Q ss_pred cceEEEEEEEEEecCCc---cccCCccccceEEEEeHhhHhcCCCc
Q 039665 198 FRKSDLFFVCMLRPRNF---HIQKQDSEIAAAQWMQAEDYAAQPYV 240 (275)
Q Consensus 198 ~~~~~~~f~~~~~~~~~---~~~~~~~E~~~~~Wv~~eel~~~~~~ 240 (275)
.+...++|++....... ... .++|+.++.|++++++.++...
T Consensus 125 ~~~~~~~f~~~~~~~~~~~~~~~-~~~E~~~~~w~~~~el~~~~~~ 169 (191)
T 3o6z_A 125 VTELIHFFIAEYSDNQRANAGGG-VEDEAIEVLELPFSQALEMIKT 169 (191)
T ss_dssp BCCEEEEEEEECCTTCC---------CCSSEEEEEEHHHHHHHHHH
T ss_pred cCcEEEEEEEEEcccccccCCCC-CCCcEEEEEEEEHHHHHHHHHc
Confidence 67777888886543211 112 2678999999999999987543
No 55
>2a6t_A SPAC19A8.12; alpha/beta/alpha, RNA binding protein,hydrolase; 2.50A {Schizosaccharomyces pombe} SCOP: a.242.1.1 d.113.1.7 PDB: 2qkm_B*
Probab=99.80 E-value=1.2e-20 Score=166.22 Aligned_cols=195 Identities=15% Similarity=0.207 Sum_probs=114.4
Q ss_pred cccceeecccCCcEEEeCCCCC--ChHHHHHHHHHHHHHHHHhCC-eeEEEEccccccccchHHHhcCc---eeccCCCC
Q 039665 28 PELLTAVGDLHGGVTVDMKKPM--DSKVFSSRLRASLSLWRQQGK-RGVWIKLPIELANLVEPAVQEGF---RYHHAEPD 101 (275)
Q Consensus 28 ~~~~~~~~d~~~g~~v~~~~~~--~~~~f~~~l~~~l~~w~~~~~-~~vW~~~~~~~~~l~~~~~~~gf---~~~~~~~~ 101 (275)
.++...-.|-+...+++++... +.+...-.+.. .+|--.+. +..+-++ |.....+| .|||+.
T Consensus 11 ~~~~~~l~dl~~rfi~n~p~~~~~~~~~~~f~ie~--a~wfy~d~~~~~~~~~--------p~~~~~~f~~~~f~~~~-- 78 (271)
T 2a6t_A 11 ATFSQVLDDLSARFILNLPAEEQSSVERLCFQIEQ--AHWFYEDFIRAQNDQL--------PSLGLRVFSAKLFAHCP-- 78 (271)
T ss_dssp CCTHHHHHHHHHHHTTTSCGGGTTCHHHHHHHHHH--HHHHHHHTHHHHCSSS--------CCCCHHHHHHHHHTTCH--
T ss_pred CCHHHHHHHHHHHHhhcCCHHHhccHHHHHHHHHH--HHHHHHHhhhhcccCC--------CcccHHHHHHHHhhhhh--
Confidence 3455556677777777765322 44433333333 35664432 1111111 22234556 788885
Q ss_pred eeeEEeecCCCcCCCCC---CCcceeEEEEEEEeC-CceEEEEEEecCCCCCCCceeCcceeccCCCCHHHHHHHHHHHH
Q 039665 102 YLMLVYWIPETADVLPA---NASHRVGVGAFVMNN-KRELLVVQENNGALKGTGVWKLPTGTIEEGEDICAAAVREVKEE 177 (275)
Q Consensus 102 ~~~l~~wl~~~~~~~p~---~~~~~v~v~~vv~~~-~~~vLLv~r~~~~~~~~~~w~lPgG~ve~gEs~~~aA~REl~EE 177 (275)
++..|.+.....++. +.++...+++++++. +++|||++|.+ .++.|+||||++|+||++.+||+||++||
T Consensus 79 --~l~~~~~~~~~~~~~~~~~~~~v~~v~avv~~~~~~~vLLv~r~~----~~g~W~lPgG~ve~gEs~~eAA~REl~EE 152 (271)
T 2a6t_A 79 --LLWKWSKVHEEAFDDFLRYKTRIPVRGAIMLDMSMQQCVLVKGWK----ASSGWGFPKGKIDKDESDVDCAIREVYEE 152 (271)
T ss_dssp --HHHHC---CCHHHHHHHHHSCCCCEEEEEEBCSSSSEEEEEEESS----TTCCCBCSEEECCTTCCHHHHHHHHHHHH
T ss_pred --hhhcccccchhHHHHHHhcCCCCCeEEEEEEECCCCEEEEEEEeC----CCCeEECCcccCCCCcCHHHHHHHHHHHH
Confidence 667777743322221 112234567888885 48999999975 34789999999999999999999999999
Q ss_pred hCCCcceeEEEEEEeeeccccceEEEEEEEEEecCCccccC-CccccceEEEEeHhhHhcCCCcc
Q 039665 178 TGIDTEFVEVLAFRQSHRSFFRKSDLFFVCMLRPRNFHIQK-QDSEIAAAQWMQAEDYAAQPYVL 241 (275)
Q Consensus 178 tGl~~~~~~~l~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~-~~~E~~~~~Wv~~eel~~~~~~~ 241 (275)
||+++..+..+..+ ......+...++|++........... +++|+.+++|++++++.++....
T Consensus 153 tGl~~~~l~~~~~~-~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~E~~~~~W~~~~el~~~~~~~ 216 (271)
T 2a6t_A 153 TGFDCSSRINPNEF-IDMTIRGQNVRLYIIPGISLDTRFESRTRKEISKIEWHNLMDLPTFKKNK 216 (271)
T ss_dssp HCCCCTTTCCTTCE-EEEEETTEEEEEEEECCCCTTCCCC------EEEEEEEEGGGSTTCC---
T ss_pred hCCCceeeeeeeee-ccCCcCCceEEEEEEEEecCcccCCCCCccceeEEEEEEHHHHHHHHhcC
Confidence 99998764322211 11122234556677755433332232 56799999999999999876543
No 56
>2b06_A MUTT/nudix family protein; structural genomics, P protein structure initiative, midwest center for structural genomics, MCSG; 1.40A {Streptococcus pneumoniae} SCOP: d.113.1.1
Probab=99.80 E-value=8.4e-19 Score=140.74 Aligned_cols=125 Identities=14% Similarity=0.189 Sum_probs=88.3
Q ss_pred ceeEEEEEEEeCCce----EEEEEEecCCCCCCCceeCcceeccCCCCHHHHHHHHHHHHhCCCcceeEEEEEEeeecc-
Q 039665 122 HRVGVGAFVMNNKRE----LLVVQENNGALKGTGVWKLPTGTIEEGEDICAAAVREVKEETGIDTEFVEVLAFRQSHRS- 196 (275)
Q Consensus 122 ~~v~v~~vv~~~~~~----vLLv~r~~~~~~~~~~w~lPgG~ve~gEs~~~aA~REl~EEtGl~~~~~~~l~~~~~~~~- 196 (275)
.+.+++++|.+ +++ |||++|...+ +++ |.||||++++||++.+||+||++||||+.+....+++.......
T Consensus 7 ~~~~~~~ii~~-~~~~~~~vLl~~r~~~~--~~g-w~lPgG~ve~gE~~~~aa~RE~~EEtGl~~~~~~~~~~~~~~~~~ 82 (155)
T 2b06_A 7 TILTNICLIED-LETQRVVMQYRAPENNR--WSG-YAFPGGHVENDEAFAESVIREIYEETGLTIQNPQLVGIKNWPLDT 82 (155)
T ss_dssp EEEEEEEEEEE-TTTTEEEEEEEC-------CCE-EECCCCBCCTTSCHHHHHHHHHHHHHSEEEESCEEEEEEEEECTT
T ss_pred cEEEEEEEEEE-CCCCeEEEEEEECCCCC--CCC-EeccceecCCCCCHHHHHHHHHHHHhCccccCCcEEEEEeeccCC
Confidence 45667777777 455 8888876543 456 99999999999999999999999999999998888887665543
Q ss_pred ccceEEEEEEEEEecCCccccCCccccceEEEEeHhhHhcCCCcccchHHHHHHHHHHhhc
Q 039665 197 FFRKSDLFFVCMLRPRNFHIQKQDSEIAAAQWMQAEDYAAQPYVLKHQMFNYICQICLTKS 257 (275)
Q Consensus 197 ~~~~~~~~f~~~~~~~~~~~~~~~~E~~~~~Wv~~eel~~~~~~~~~~~~~~~~~~~~~~~ 257 (275)
......++|.|... ... +...|..+++|++++++.++++... .+.+++.+++..
T Consensus 83 ~~~~~~~~~~~~~~--~~~--~~~~e~~~~~W~~~~el~~~~~~~~---~~~~l~~~~~~~ 136 (155)
T 2b06_A 83 GGRYIVICYKATEF--SGT--LQSSEEGEVSWVQKDQIPNLNLAYD---MLPLMEMMEAPD 136 (155)
T ss_dssp SCEEEEEEEEECEE--EEC--CCCBTTBEEEEEEGGGGGGSCBCTT---HHHHHHHHHCTT
T ss_pred CceEEEEEEEEEec--CCC--CCCCcceeeEEeeHHHhhhCCCChh---HHHHHHHHhCCC
Confidence 22344455555332 222 2346788999999999999887654 556666666543
No 57
>2jvb_A Protein PSU1, mRNA-decapping enzyme subunit 2; DCP2, mRNA decay, cytoplasm, hydrolase, manganese, metal-binding, mRNA processing; NMR {Saccharomyces cerevisiae}
Probab=99.80 E-value=1.3e-19 Score=144.11 Aligned_cols=126 Identities=21% Similarity=0.285 Sum_probs=83.1
Q ss_pred EEEEEEEeCC-ceEEEEEEecCCCCCCCceeCcceeccCCCCHHHHHHHHHHHHhCCCcceeEEEEEEeeeccccceEEE
Q 039665 125 GVGAFVMNNK-RELLVVQENNGALKGTGVWKLPTGTIEEGEDICAAAVREVKEETGIDTEFVEVLAFRQSHRSFFRKSDL 203 (275)
Q Consensus 125 ~v~~vv~~~~-~~vLLv~r~~~~~~~~~~w~lPgG~ve~gEs~~~aA~REl~EEtGl~~~~~~~l~~~~~~~~~~~~~~~ 203 (275)
.++++|++.+ ++|||+++. ..+.|.||||++++||++.+||+||++||||+.+..+..+..+.... ..+...+
T Consensus 6 ~~~~~i~~~~~~~vLl~~r~-----~~g~w~~PgG~ve~gEs~~~aa~RE~~EEtGl~~~~~~~~~~~~~~~-~~~~~~~ 79 (146)
T 2jvb_A 6 VRGAAIFNENLSKILLVQGT-----ESDSWSFPRGKISKDENDIDCCIREVKEEIGFDLTDYIDDNQFIERN-IQGKNYK 79 (146)
T ss_dssp CEEEEEBCTTSSEEEEECCS-----SSSCCBCCEECCCSSSCHHHHHHHHHHHHTSCCCSSSSCSSCEEEEE-ETTEEEE
T ss_pred EEEEEEEeCCCCEEEEEEEc-----CCCcEECCcccCCCCCCHHHHHHHHHHHHHCCCchHhcccccccccc-cCCceEE
Confidence 3667788865 899999876 35899999999999999999999999999999887542222111111 1223344
Q ss_pred EEEEEEecCCccccC-CccccceEEEEeHhhHhcCCCcccch--HHHHHHHHHHhh
Q 039665 204 FFVCMLRPRNFHIQK-QDSEIAAAQWMQAEDYAAQPYVLKHQ--MFNYICQICLTK 256 (275)
Q Consensus 204 ~f~~~~~~~~~~~~~-~~~E~~~~~Wv~~eel~~~~~~~~~~--~~~~~~~~~~~~ 256 (275)
+|++........... +++|+.++.|++++++.++....... ++..++..+..+
T Consensus 80 ~~~~~~~~~~~~~~~~~~~E~~~~~W~~~~el~~~~~~~~~~~~l~~~~~~~l~~~ 135 (146)
T 2jvb_A 80 IFLISGVSEVFNFKPQVRNEIDKIEWFDFKKISKTMYKSNIKYYLINSMMRPLSMW 135 (146)
T ss_dssp EEEECCCCSSSCCCCCCSSSCCCEEEEEHHHHHTGGGCSSCCCHHHHHHHHHHHHH
T ss_pred EEEEEeccccccCCcCCcchhheeEEeEHHHHHhhhcccchhhhhHHHHHHHHHHH
Confidence 555432222222222 36789999999999999976654332 333444444333
No 58
>1hzt_A Isopentenyl diphosphate delta-isomerase; dimethylallyl, isoprenoids; 1.45A {Escherichia coli} SCOP: d.113.1.2 PDB: 1hx3_A 1r67_A 1x84_A* 1x83_A* 1ppv_A* 1nfz_A* 1nfs_A* 1ppw_A* 1pvf_A 2veh_A* 2vej_A 2vnp_A* 2vnq_A 2g74_A 2g73_A* 2b2k_A 1i9a_A 1q54_A* 1ow2_A* 3hyq_A*
Probab=99.79 E-value=1.6e-19 Score=150.41 Aligned_cols=130 Identities=17% Similarity=0.161 Sum_probs=93.6
Q ss_pred EEEEEEEeCCceEEEEEEecCCCCCCCceeC-cceeccCCCCHHHHHHHHHHHHhCCCccee-EEEEEEeeec--c-c--
Q 039665 125 GVGAFVMNNKRELLVVQENNGALKGTGVWKL-PTGTIEEGEDICAAAVREVKEETGIDTEFV-EVLAFRQSHR--S-F-- 197 (275)
Q Consensus 125 ~v~~vv~~~~~~vLLv~r~~~~~~~~~~w~l-PgG~ve~gEs~~~aA~REl~EEtGl~~~~~-~~l~~~~~~~--~-~-- 197 (275)
+|++++++.+++|||++|.......+|.|.| |||++++||++.+||+||++||||+.+..+ ..++.+.... . .
T Consensus 34 ~v~~~i~~~~g~vLl~~R~~~~~~~~g~w~~~PgG~ve~gEt~~~aa~REl~EEtGl~~~~~~~~~~~~~~~~~~~~~~~ 113 (190)
T 1hzt_A 34 AFSSWLFNAKGQLLVTRRALSKKAWPGVWTNSVCGHPQLGESNEDAVIRRCRYELGVEITPPESIYPDFRYRATDPSGIV 113 (190)
T ss_dssp CEEEEEECTTCCEEEEEECTTCSSSTTCEEESEEECCCTTCCHHHHHHHHHHHHHCCCBSCCEEEETTCEEEEECTTSCE
T ss_pred EEEEEEEcCCCEEEEEEeCCCCCCCCCcccCcccccCCCCCCHHHHHHHHHHHHHCCCchhhheeeeeEEEEeeCCCCCc
Confidence 5778889888999999987554446799999 999999999999999999999999999877 6665332211 1 1
Q ss_pred cceEEEEEEEEEecCCccccCCccccceEEEEeHhhHhcCCCccc---chHHHHHHHHHHhhc
Q 039665 198 FRKSDLFFVCMLRPRNFHIQKQDSEIAAAQWMQAEDYAAQPYVLK---HQMFNYICQICLTKS 257 (275)
Q Consensus 198 ~~~~~~~f~~~~~~~~~~~~~~~~E~~~~~Wv~~eel~~~~~~~~---~~~~~~~~~~~~~~~ 257 (275)
.....++|+|... ..+..+++|+.+++|++++++.++..... .+.++.+++.+++..
T Consensus 114 ~~~~~~~f~~~~~---~~~~~~~~E~~~~~W~~~~el~~~~~~~~~~~~p~~~~~~~~~~~~~ 173 (190)
T 1hzt_A 114 ENEVCPVFAARTT---SALQINDDEVMDYQWCDLADVLHGIDATPWAFSPWMVMQATNREARK 173 (190)
T ss_dssp EEEECCEEEEEBC---SCCCCCTTTEEEEEEECHHHHHHHHHHCGGGBCHHHHHHHHSHHHHH
T ss_pred ceEEEEEEEEecC---CCCcCCccceeeEEEecHHHHHHHHHcChhhcCchHHHHHHHHHHHH
Confidence 1233456666542 34455678999999999999988633222 234556666555544
No 59
>2fvv_A Diphosphoinositol polyphosphate phosphohydrolase 1; nudix, inositol polyphosphate metabolism, structural genomics, structural genomics consortium; HET: IHP; 1.25A {Homo sapiens} SCOP: d.113.1.1 PDB: 2q9p_A* 2duk_A 3mcf_A*
Probab=99.79 E-value=4.3e-19 Score=148.76 Aligned_cols=111 Identities=19% Similarity=0.315 Sum_probs=80.7
Q ss_pred eeEEEEEEE--eCCceEEEEEEecCCCCCCCceeCcceeccCCCCHHHHHHHHHHHHhCCCcceeEEEEEEeeeccccce
Q 039665 123 RVGVGAFVM--NNKRELLVVQENNGALKGTGVWKLPTGTIEEGEDICAAAVREVKEETGIDTEFVEVLAFRQSHRSFFRK 200 (275)
Q Consensus 123 ~v~v~~vv~--~~~~~vLLv~r~~~~~~~~~~w~lPgG~ve~gEs~~~aA~REl~EEtGl~~~~~~~l~~~~~~~~~~~~ 200 (275)
+..++++++ +.+++|||++|.+ .++.|.||||++|+||++.+||+||++||||+++....+++.+.... ...
T Consensus 40 ~~~~~~vi~~~~~~~~vLLv~r~~----~~g~W~lPgG~ve~gEt~~eaa~REl~EEtGl~~~~~~~l~~~~~~~--~~~ 113 (194)
T 2fvv_A 40 KKRAACLCFRSESEEEVLLVSSSR----HPDRWIVPGGGMEPEEEPSVAAVREVCEEAGVKGTLGRLVGIFENQE--RKH 113 (194)
T ss_dssp EEEEEEEEESSTTCCEEEEEECSS----CTTSEECSEEECCTTCCHHHHHHHHHHHHHCEEEEEEEEEEEEEETT--TTE
T ss_pred cccEEEEEEEECCCCEEEEEEEeC----CCCcEECCCCcCCCCcCHHHHHHHHHHHHhCCccccceEEEEEEcCC--Cce
Confidence 445666666 3568999999875 34799999999999999999999999999999999888888776432 234
Q ss_pred EEEEEEEEEecCCccccCCccccceEEEEeHhhHhcCCC
Q 039665 201 SDLFFVCMLRPRNFHIQKQDSEIAAAQWMQAEDYAAQPY 239 (275)
Q Consensus 201 ~~~~f~~~~~~~~~~~~~~~~E~~~~~Wv~~eel~~~~~ 239 (275)
..++|+|.+...........++..+++|++++++.++..
T Consensus 114 ~~~~f~~~~~~~~~~~~~~~e~~~~~~W~~~~el~~~l~ 152 (194)
T 2fvv_A 114 RTYVYVLIVTEVLEDWEDSVNIGRKREWFKIEDAIKVLQ 152 (194)
T ss_dssp EEEEEEEEEEEECSSCHHHHHHCCCEEEEEHHHHHHHHT
T ss_pred EEEEEEEEEccccCCCCCcccccceEEEEEHHHHHHHHh
Confidence 556777754321111111122446899999999987643
No 60
>3fk9_A Mutator MUTT protein; structural genomics, hydrolase, PSI-2, protein structure initiative; 2.50A {Bacillus halodurans}
Probab=99.79 E-value=1.8e-18 Score=144.11 Aligned_cols=121 Identities=21% Similarity=0.277 Sum_probs=87.1
Q ss_pred EEEEEEEeCCceEEEEEEecCCCCCCCceeCcceeccCCCCHHHHHHHHHHHHhCCCcceeEEEEEEeeeccccce----
Q 039665 125 GVGAFVMNNKRELLVVQENNGALKGTGVWKLPTGTIEEGEDICAAAVREVKEETGIDTEFVEVLAFRQSHRSFFRK---- 200 (275)
Q Consensus 125 ~v~~vv~~~~~~vLLv~r~~~~~~~~~~w~lPgG~ve~gEs~~~aA~REl~EEtGl~~~~~~~l~~~~~~~~~~~~---- 200 (275)
.+++++.+ +++|||++|. ..|.|.||||++++||++.+||+||++||||+.+....+++.+.........
T Consensus 6 v~~~vi~~-~~~vLL~~r~-----~~g~W~lPGG~ve~gEs~~~aa~REl~EEtGl~~~~~~~~~~~~~~~~~~~~~~~~ 79 (188)
T 3fk9_A 6 VTNCIVVD-HDQVLLLQKP-----RRGWWVAPGGKMEAGESILETVKREYWEETGITVKNPELKGIFSMVIFDEGKIVSE 79 (188)
T ss_dssp EEEEEEEE-TTEEEEEECT-----TTCCEECCEEECCTTCCHHHHHHHHHHHHHSCEESSCEEEEEEEEEEEETTEEEEE
T ss_pred EEEEEEEE-CCEEEEEEeC-----CCCeEECCeecccCCCCHHHHHHHHHHHHHCCCCCCceEEEEEEEEecCCCcceEE
Confidence 34555555 6899999985 3689999999999999999999999999999999988888776655433221
Q ss_pred -EEEEEEEEEecCCccccCCccccceEEEEeHhhHhcCCCcccchHHHHHHHHHHhhc
Q 039665 201 -SDLFFVCMLRPRNFHIQKQDSEIAAAQWMQAEDYAAQPYVLKHQMFNYICQICLTKS 257 (275)
Q Consensus 201 -~~~~f~~~~~~~~~~~~~~~~E~~~~~Wv~~eel~~~~~~~~~~~~~~~~~~~~~~~ 257 (275)
..++|.| ....+.+. ...|..+++|++++++.++++... .+.++..+++..
T Consensus 80 ~~~~~f~a--~~~~~~~~-~~~e~~~~~W~~~~el~~~~l~~~---~~~~l~~~l~~~ 131 (188)
T 3fk9_A 80 WMLFTFKA--TEHEGEML-KQSPEGKLEWKKKDEVLELPMAAG---DKWIFKHVLHSD 131 (188)
T ss_dssp EEEEEEEE--SCEESCCC-SEETTEEEEEEEGGGGGGSCCCHH---HHHHHHHHTTCC
T ss_pred EEEEEEEE--ECCCCCCc-CCCCCEeEEEEEHHHhhhCCCCHH---HHHHHHHHHcCC
Confidence 3344444 32223322 234556899999999999877654 456666666553
No 61
>1k2e_A Nudix homolog; nudix/MUTT-like fold, mixed alpha/beta, dimer, putative NUDI hydrolase, structural genomics, unknown function; 1.80A {Pyrobaculum aerophilum} SCOP: d.113.1.1 PDB: 1jrk_A 1k26_A
Probab=99.79 E-value=4.6e-19 Score=142.93 Aligned_cols=104 Identities=19% Similarity=0.288 Sum_probs=74.9
Q ss_pred eEEEEEEEeCCceEEEEEEecCCCCCCCceeCcceeccCCCCHHHHHHHHHHHHhCCCcceeEEEEEEee----------
Q 039665 124 VGVGAFVMNNKRELLVVQENNGALKGTGVWKLPTGTIEEGEDICAAAVREVKEETGIDTEFVEVLAFRQS---------- 193 (275)
Q Consensus 124 v~v~~vv~~~~~~vLLv~r~~~~~~~~~~w~lPgG~ve~gEs~~~aA~REl~EEtGl~~~~~~~l~~~~~---------- 193 (275)
+.++++|++ +++|||++|.+ .|.|.||||++++||++.+||+||++||||+++.....++....
T Consensus 2 ~~~~~vi~~-~~~vLL~~r~~-----~g~W~lPgG~ve~gEs~~~aa~REl~EEtGl~~~~~~~~~~~~~~~~~~~~~~~ 75 (156)
T 1k2e_A 2 IVTSGVLVE-NGKVLLVKHKR-----LGVYIYPGGHVEHNETPIEAVKREFEEETGIVVEPIGFTYGIIDENAVERPMPL 75 (156)
T ss_dssp EEEEEECEE-TTEEEEEECTT-----TCSEECSEEECCTTCCHHHHHHHHHHHHHSEEEEECCCCCCCBSSSEEECCCCS
T ss_pred eEEEEEEEE-CCEEEEEEEcC-----CCcEECCeeecCCCCCHHHHHHHHHHHHHCCcceeccceeeecccccccccccc
Confidence 357788888 88999999863 57899999999999999999999999999999876655331110
Q ss_pred -------eccc-c-ceEEEEEEEEEecCCccccCCccccceEEEEeHhhHhcCCCccc
Q 039665 194 -------HRSF-F-RKSDLFFVCMLRPRNFHIQKQDSEIAAAQWMQAEDYAAQPYVLK 242 (275)
Q Consensus 194 -------~~~~-~-~~~~~~f~~~~~~~~~~~~~~~~E~~~~~Wv~~eel~~~~~~~~ 242 (275)
.... . .....+|+|.. ...|..+++|++++++.++++...
T Consensus 76 ~~~~~~~~~~~~~~~~~~~~f~~~~---------~~~e~~~~~W~~~~el~~~~~~~~ 124 (156)
T 1k2e_A 76 VILEEVVKYPEETHIHFDLIYLVKR---------VGGDLKNGEWIDVREIDRIETFPN 124 (156)
T ss_dssp EEEEEEEECSSCEEEEEEEEEEEEE---------EEECCCSCEEEEGGGGGGSCBSTT
T ss_pred eeeeeeecCCCCceEEEEEEEEEEe---------cCCcEeeeEEeCHHHHhcCCCChH
Confidence 0111 0 11223455532 234678899999999998876544
No 62
>3f13_A Putative nudix hydrolase family member; structural genomics, PSI-2, protein structure initiative; 1.70A {Chromobacterium violaceum}
Probab=99.77 E-value=4.3e-18 Score=138.74 Aligned_cols=115 Identities=18% Similarity=0.228 Sum_probs=79.6
Q ss_pred eEEEEEEEeCCceEEEEEEecCCCCCCCceeCcceeccCCCCHHHHHHHHHHHHhCCCcceeEEEEEEeeeccccceEEE
Q 039665 124 VGVGAFVMNNKRELLVVQENNGALKGTGVWKLPTGTIEEGEDICAAAVREVKEETGIDTEFVEVLAFRQSHRSFFRKSDL 203 (275)
Q Consensus 124 v~v~~vv~~~~~~vLLv~r~~~~~~~~~~w~lPgG~ve~gEs~~~aA~REl~EEtGl~~~~~~~l~~~~~~~~~~~~~~~ 203 (275)
+.+++++++.++++||++|+ .|.|.||||++++||++.+||+||++||||+.+.....++.+.... ...+
T Consensus 16 ~~~~~~ii~~~~~vLL~~r~------~g~w~lPgG~ve~gEs~~~aa~REl~EEtGl~~~~~~~l~~~~~~~----~~~~ 85 (163)
T 3f13_A 16 ARRATAIIEMPDGVLVTASR------GGRYNLPGGKANRGELRSQALIREIREETGLRINSMLYLFDHITPF----NAHK 85 (163)
T ss_dssp EEEEEEECEETTEEEEEECC---------BBCSEEECCTTCCHHHHHHHHHHHHHCCCCCEEEEEEEEECSS----EEEE
T ss_pred eEEEEEEEEeCCEEEEEEEC------CCeEECCceeCCCCCCHHHHHHHHHHHHHCcccceeEEEEEEecCC----eEEE
Confidence 44555666667889999875 3789999999999999999999999999999998888876543322 5556
Q ss_pred EEEEEEecCCccccCCccccceEEEEeHhhHhcCCCcccchHHHHHHHHHHhh
Q 039665 204 FFVCMLRPRNFHIQKQDSEIAAAQWMQAEDYAAQPYVLKHQMFNYICQICLTK 256 (275)
Q Consensus 204 ~f~~~~~~~~~~~~~~~~E~~~~~Wv~~eel~~~~~~~~~~~~~~~~~~~~~~ 256 (275)
+|+|.. .+.+... +|+.+++|++ .+...+.+... .+.+++.+++.
T Consensus 86 ~f~~~~---~~~~~~~-~E~~~~~W~~-~~~~~~~l~~~---~~~il~~~~~~ 130 (163)
T 3f13_A 86 VYLCIA---QGQPKPQ-NEIERIALVS-SPDTDMDLFVE---GRAILRRYARL 130 (163)
T ss_dssp EEEEEC----CCCCCC-TTCCEEEEES-STTCSSCBCHH---HHHHHHHHHHH
T ss_pred EEEEEE---CCcCccC-CCceEEEEEC-cccccCCCCHH---HHHHHHHHHHh
Confidence 777753 3344433 4889999999 44444444433 44455555443
No 63
>3e57_A Uncharacterized protein TM1382; structural genomics, nudix hydrolase, PSI-2, protein structure initiative; 1.89A {Thermotoga maritima}
Probab=99.75 E-value=1.5e-18 Score=146.72 Aligned_cols=108 Identities=16% Similarity=0.241 Sum_probs=75.0
Q ss_pred EEEEEEeCCceEEEEEEecCCC--CCCCceeC-cceeccCCCC--H----HHHHHHHHHHHhCCCcceeEEEEEEeeecc
Q 039665 126 VGAFVMNNKRELLVVQENNGAL--KGTGVWKL-PTGTIEEGED--I----CAAAVREVKEETGIDTEFVEVLAFRQSHRS 196 (275)
Q Consensus 126 v~~vv~~~~~~vLLv~r~~~~~--~~~~~w~l-PgG~ve~gEs--~----~~aA~REl~EEtGl~~~~~~~l~~~~~~~~ 196 (275)
+..+|++.+++|||++|...+. ...+.|.+ |||++|+||+ + .+||+||++||||+++....+++.+.....
T Consensus 70 i~~~II~~~grvLl~~R~~~~~e~~~~g~w~~gPGGhVE~GEs~~p~EtleeAa~REl~EEtGl~v~~~~~ig~~~~~~~ 149 (211)
T 3e57_A 70 IPYVVIMDGDRVLITKRTTKQSEKRLHNLYSLGIGGHVREGDGATPREAFLKGLEREVNEEVDVSLRELEFLGLINSSTT 149 (211)
T ss_dssp EEEEEEEETTEEEEEEC------------CBSSEECCCBGGGCSSHHHHHHHHHHHHHHHHEEEEEEEEEEEEEEECCSS
T ss_pred EEEEEEEECCEEEEEEECCCCCcccccCCcccccceEEeCCCCCCchhhHHHHHHHHHHHHhCCeeeccEEEEEEeccCC
Confidence 4445555588999999975431 13478999 9999999998 4 999999999999999988888888765322
Q ss_pred ccc--eEEEEEEEEEecCCccccCCccccceEEEEeHhhHhcC
Q 039665 197 FFR--KSDLFFVCMLRPRNFHIQKQDSEIAAAQWMQAEDYAAQ 237 (275)
Q Consensus 197 ~~~--~~~~~f~~~~~~~~~~~~~~~~E~~~~~Wv~~eel~~~ 237 (275)
..+ ....+|.|... .+ .+.+.|..+++|++++++.++
T Consensus 150 ~~~~~~l~~~f~~~~~--~g--~~~~~E~~~~~W~~~~eL~~~ 188 (211)
T 3e57_A 150 EVSRVHLGALFLGRGK--FF--SVKEKDLFEWELIKLEELEKF 188 (211)
T ss_dssp HHHHTEEEEEEEEEEE--EE--EESCTTTCEEEEEEHHHHHHH
T ss_pred CCCeEEEEEEEEEEeC--Cc--eeCCCCeEEEEEEEHHHHHHh
Confidence 212 23345777543 22 335667889999999999987
No 64
>2fml_A MUTT/nudix family protein; structural genomics, PSI, protein structure initiative, midwest center structural genomics, MCSG; 2.26A {Enterococcus faecalis} SCOP: a.4.5.68 d.113.1.6
Probab=99.74 E-value=5e-17 Score=143.14 Aligned_cols=113 Identities=18% Similarity=0.276 Sum_probs=81.5
Q ss_pred CCCCcceeEEEEEEEe--C---CceEEEEEEecCCCCCCCceeCcceeccCCCCHHHHHHHHHHHHhCCCcc--eeEEEE
Q 039665 117 PANASHRVGVGAFVMN--N---KRELLVVQENNGALKGTGVWKLPTGTIEEGEDICAAAVREVKEETGIDTE--FVEVLA 189 (275)
Q Consensus 117 p~~~~~~v~v~~vv~~--~---~~~vLLv~r~~~~~~~~~~w~lPgG~ve~gEs~~~aA~REl~EEtGl~~~--~~~~l~ 189 (275)
+.+..+.++|+++|+. + +++|||++|.+.+ ..|.|.||||++++||++.+||+||++||||+.+. .+..++
T Consensus 33 ~~~~~p~v~v~~vv~~~~~~~~~~~VLLv~R~~~p--~~g~W~lPGG~ve~gEs~~~AA~REl~EEtGl~v~~~~l~~l~ 110 (273)
T 2fml_A 33 PEYEKPSLTVDMVLLCYNKEADQLKVLLIQRKGHP--FRNSWALPGGFVNRNESTEDSVLRETKEETGVVISQENIEQLH 110 (273)
T ss_dssp CCCCCCEEEEEEEEEEEETTTTEEEEEEEEECSSS--STTCEECCEEECCTTSCHHHHHHHHHHHHHCCCCCGGGEEEEE
T ss_pred ccCCCCceEEEEEEEEEcCCCCCcEEEEEEccCCC--CCCcEECCccCCCCCcCHHHHHHHHHHHHHCCCCCcCcEEEEE
Confidence 3455667788888876 2 3489999998654 46899999999999999999999999999997654 455555
Q ss_pred EEeeeccc--cceEEEEEEEEEecCCccccCCccccceEEEEeHhhH
Q 039665 190 FRQSHRSF--FRKSDLFFVCMLRPRNFHIQKQDSEIAAAQWMQAEDY 234 (275)
Q Consensus 190 ~~~~~~~~--~~~~~~~f~~~~~~~~~~~~~~~~E~~~~~Wv~~eel 234 (275)
.+...... .....++|+|.+... . ....+|..++.|++++++
T Consensus 111 ~~~~~~r~~~~~~~~~~y~a~~~~~--~-~~~~~E~~~~~W~~~~e~ 154 (273)
T 2fml_A 111 SFSRPDRDPRGWVVTVSYLAFIGEE--P-LIAGDDAKEVHWFNLERH 154 (273)
T ss_dssp EECCTTSSTTSSEEEEEEEEECCCC--C-CCCCTTEEEEEEEEEEEE
T ss_pred EEcCCCCCCCceEEEEEEEEEeCCC--C-CCCCcceeeEEEEEhhHh
Confidence 54432221 124556677755422 2 335678899999999974
No 65
>2qjo_A Bifunctional NMN adenylyltransferase/nudix hydrol; two individual domains, hydrolase; HET: APR NAD; 2.60A {Synechocystis SP}
Probab=99.74 E-value=2.6e-17 Score=148.58 Aligned_cols=129 Identities=22% Similarity=0.260 Sum_probs=83.7
Q ss_pred CcceeEEEEEEEeCCceEEEEEEecCCCCCCCceeCcceeccCCCCHHHHHHHHHHHHhCCCcceeEEEE------EEee
Q 039665 120 ASHRVGVGAFVMNNKRELLVVQENNGALKGTGVWKLPTGTIEEGEDICAAAVREVKEETGIDTEFVEVLA------FRQS 193 (275)
Q Consensus 120 ~~~~v~v~~vv~~~~~~vLLv~r~~~~~~~~~~w~lPgG~ve~gEs~~~aA~REl~EEtGl~~~~~~~l~------~~~~ 193 (275)
+...++|+++|++ +++|||++|.+.+ ++|.|.||||++|+||++.+||+||++||||+++....+++ .+..
T Consensus 200 ~~~~~~v~~vi~~-~~~vLL~~r~~~~--~~g~w~lPgG~ve~gE~~~~aa~REl~EEtGl~~~~~~~~~~~~~~~~~~~ 276 (341)
T 2qjo_A 200 APTFITTDAVVVQ-AGHVLMVRRQAKP--GLGLIALPGGFIKQNETLVEGMLRELKEETRLKVPLPVLRGSIVDSHVFDA 276 (341)
T ss_dssp CCCEEEEEEEEEE-TTEEEEEECCSSS--STTCEECSEEECCTTSCHHHHHHHHHHHHHCCSSCHHHHHHTEEEEEEECC
T ss_pred CCCceEEEEEEEe-CCEEEEEEecCCC--CCCeEECCCCcCCCCCCHHHHHHHHHhhhhCCccccccccccccceEEEeC
Confidence 3456778888875 6899999997643 47899999999999999999999999999999987544321 2211
Q ss_pred ecc--ccceEEEEEEEEEecCCccccCCccccceEEEEeHhhHhcC--CCcccchHHHHHHHHHH
Q 039665 194 HRS--FFRKSDLFFVCMLRPRNFHIQKQDSEIAAAQWMQAEDYAAQ--PYVLKHQMFNYICQICL 254 (275)
Q Consensus 194 ~~~--~~~~~~~~f~~~~~~~~~~~~~~~~E~~~~~Wv~~eel~~~--~~~~~~~~~~~~~~~~~ 254 (275)
... ......++|+|.+.........+++|+.+++|++++++.++ ++... .+.+++.++
T Consensus 277 ~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~e~~~~~W~~~~el~~~~~~~~~~---~~~il~~~~ 338 (341)
T 2qjo_A 277 PGRSLRGRTITHAYFIQLPGGELPAVKGGDDAQKAWWMSLADLYAQEEQIYED---HFQIIQHFV 338 (341)
T ss_dssp TTSCTTSCEEEEEEEEECCSSSCCCCC------CEEEEEHHHHHHTGGGBCTT---HHHHHHHHC
T ss_pred CCCCCCCcEEEEEEEEEecCCCcCccCCCCceeeEEEeeHHHHhhhhhhhchH---HHHHHHHHH
Confidence 111 11234567777654322111235678999999999999987 34333 334444444
No 66
>2qjt_B Nicotinamide-nucleotide adenylyltransferase; two individual domains, hydrolase; HET: AMP; 2.30A {Francisella tularensis} PDB: 2r5w_B
Probab=99.74 E-value=4.7e-17 Score=147.73 Aligned_cols=133 Identities=20% Similarity=0.250 Sum_probs=90.7
Q ss_pred CCcceeEEEEEEEeCCceEEEEEEecCCCCCCCceeCcceeccCCCCHHHHHHHHHHHHhCCCcceeEE----EEEEee-
Q 039665 119 NASHRVGVGAFVMNNKRELLVVQENNGALKGTGVWKLPTGTIEEGEDICAAAVREVKEETGIDTEFVEV----LAFRQS- 193 (275)
Q Consensus 119 ~~~~~v~v~~vv~~~~~~vLLv~r~~~~~~~~~~w~lPgG~ve~gEs~~~aA~REl~EEtGl~~~~~~~----l~~~~~- 193 (275)
++...++|+++|++ +++|||++|.+.+ +++.|+||||++|+||++.+||+||++||||+++....+ ......
T Consensus 204 ~~~~~~~v~~vv~~-~~~vLL~~r~~~~--~~g~w~lPgG~ve~gEt~~~aa~REl~EEtGl~v~~~~~~~~~~~~~~~~ 280 (352)
T 2qjt_B 204 FKPNFVTVDALVIV-NDHILMVQRKAHP--GKDLWALPGGFLECDETIAQAIIRELFEETNINLTHEQLAIAKRCEKVFD 280 (352)
T ss_dssp SCCEEEEEEEEEEE-TTEEEEEEESSSS--STTCEECSEEECCTTSCHHHHHHHHHHHHHCCSCCHHHHHHHEEEEEEEC
T ss_pred CCCCceEEEEEEEE-CCEEEEEEEcCCC--CCCeEECCCCcCCCCCCHHHHHHHHHHHhhCCCcccchhcceeeeeEEec
Confidence 33556778888875 6899999998643 468999999999999999999999999999999874322 121111
Q ss_pred eccc---cceEEEEEEEEEecCCcccc-CCccccceEEEEeH-hhHhcC--CCcccchHHHHHHHHHHhhc
Q 039665 194 HRSF---FRKSDLFFVCMLRPRNFHIQ-KQDSEIAAAQWMQA-EDYAAQ--PYVLKHQMFNYICQICLTKS 257 (275)
Q Consensus 194 ~~~~---~~~~~~~f~~~~~~~~~~~~-~~~~E~~~~~Wv~~-eel~~~--~~~~~~~~~~~~~~~~~~~~ 257 (275)
.+.. .....++|++.+......+. .+++|+.+++|+++ +++.++ .+... .+.+++.+++.+
T Consensus 281 ~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~E~~~~~W~~~~~el~~~~~~~~~~---~~~il~~~~~~l 348 (352)
T 2qjt_B 281 YPDRSVRGRTISHVGLFVFDQWPSLPEINAADDAKDVKWISLGSNIKNICDRMLED---HYQIITILLEEC 348 (352)
T ss_dssp CTTSCTTSEEEEEEEEEEECSCSSCCCCCCCTTEEEEEEEESSHHHHHTTTSBSTT---HHHHHHHHHHHT
T ss_pred CCCCCCCccEEEEEEEEEEeCCCCCCccCCCccceEEEEecHHHHHHhhhhhhChh---HHHHHHHHHHHh
Confidence 1111 11245667776543221122 24678999999999 999987 33332 445666666555
No 67
>3fsp_A A/G-specific adenine glycosylase; protein-DNA complex, DNA glycosylase, transition state analog, DNA repair; HET: NRI; 2.20A {Geobacillus stearothermophilus} PDB: 3fsq_A* 1rrs_A* 1vrl_A* 1rrq_A* 3g0q_A*
Probab=99.72 E-value=4.1e-17 Score=149.59 Aligned_cols=124 Identities=12% Similarity=0.121 Sum_probs=97.6
Q ss_pred ceeEEEEEEEeCCceEEEEEEecCCCCCCCceeCcceeccCCCCHHHHHHHHHHHHhCCCcceeEEEEEEeeeccccceE
Q 039665 122 HRVGVGAFVMNNKRELLVVQENNGALKGTGVWKLPTGTIEEGEDICAAAVREVKEETGIDTEFVEVLAFRQSHRSFFRKS 201 (275)
Q Consensus 122 ~~v~v~~vv~~~~~~vLLv~r~~~~~~~~~~w~lPgG~ve~gEs~~~aA~REl~EEtGl~~~~~~~l~~~~~~~~~~~~~ 201 (275)
.+..++++|.|.+++|||+||...+. ++|.|+||||++|+| ++.+|++||++||||+.+.....++.+.+.+.++...
T Consensus 239 ~~~~~~~vi~~~~g~vLL~rR~~~g~-~~GlWefPGG~ve~g-t~~~al~REl~EE~Gl~v~~~~~l~~~~h~~~h~~~~ 316 (369)
T 3fsp_A 239 QVPLAVAVLADDEGRVLIRKRDSTGL-LANLWEFPSCETDGA-DGKEKLEQMVGEQYGLQVELTEPIVSFEHAFSHLVWQ 316 (369)
T ss_dssp EEEEEEEEEECSSSEEEEEECCSSST-TTTCEECCEEECSSS-CTHHHHHHHHTTSSSCCEEECCCCCEEEEECSSEEEE
T ss_pred eEEEEEEEEEeCCCEEEEEECCCCCC-cCCcccCCCcccCCC-CcHHHHHHHHHHHhCCceeeecccccEEEEcceEEEE
Confidence 34456667777889999999986543 689999999999999 9999999999999999998888777777777766666
Q ss_pred EEEEEEEEecCCccccCCccccceEEEEeHhhHhcCCCcccchHHHHHHHHHHhhc
Q 039665 202 DLFFVCMLRPRNFHIQKQDSEIAAAQWMQAEDYAAQPYVLKHQMFNYICQICLTKS 257 (275)
Q Consensus 202 ~~~f~~~~~~~~~~~~~~~~E~~~~~Wv~~eel~~~~~~~~~~~~~~~~~~~~~~~ 257 (275)
.++|.+..... ..|..+++|++++++.+++++.. .+.+++.+.+.+
T Consensus 317 ~~~~~~~~~~~-------~~e~~~~~Wv~~~el~~~~l~~~---~~~il~~l~~~~ 362 (369)
T 3fsp_A 317 LTVFPGRLVHG-------GPVEEPYRLAPEDELKAYAFPVS---HQRVWREYKEWA 362 (369)
T ss_dssp EEEEEEEECCS-------SCCCTTEEEEEGGGGGGSCCCHH---HHHHHHHHHHHT
T ss_pred EEEEEEEEcCC-------CCCccccEEeeHHHhhhCCCCHH---HHHHHHHHHHHh
Confidence 67777755321 35678899999999999887654 556666666554
No 68
>3fjy_A Probable MUTT1 protein; dimer, protein structure initiative II), NYSGXRC, 11181H, structural genomics; 2.15A {Bifidobacterium adolescentis atcc 1570ORGANISM_TAXID}
Probab=99.71 E-value=1.1e-16 Score=146.28 Aligned_cols=105 Identities=22% Similarity=0.242 Sum_probs=76.9
Q ss_pred CCceEEEEEEecCCCCCCCceeCcceeccCCCCHHHHHHHHHHHHhCCCcceeEEEEEEeeeccc-------------cc
Q 039665 133 NKRELLVVQENNGALKGTGVWKLPTGTIEEGEDICAAAVREVKEETGIDTEFVEVLAFRQSHRSF-------------FR 199 (275)
Q Consensus 133 ~~~~vLLv~r~~~~~~~~~~w~lPgG~ve~gEs~~~aA~REl~EEtGl~~~~~~~l~~~~~~~~~-------------~~ 199 (275)
++.+|||++|. ..+.|.||||++|+||++.+||+||++||||+.+....+++.....+.. ..
T Consensus 36 ~~~~vLLv~r~-----~~g~W~lPgG~ve~gEs~~~AA~REl~EEtGl~~~~~~~l~~~~~~~~~~g~~~~~~~~~~~~~ 110 (364)
T 3fjy_A 36 DSIEVCIVHRP-----KYDDWSWPKGKLEQNETHRHAAVREIGEETGSPVKLGPYLCEVEYPLSEEGKKTRHSHDCTADT 110 (364)
T ss_dssp TTEEEEEEEET-----TTTEEECCEEECCTTCCHHHHHHHHHHHHHSCCEEEEEEEEEEC--------------------
T ss_pred CceEEEEEEcC-----CCCCEECCcCCCCCCCCHHHHHHHHHHHHhCCeeeeccccceEEEeccCCCcccccccccccCc
Confidence 34589999986 3489999999999999999999999999999999888888765543332 13
Q ss_pred eEEEEEEEEEecCC----------ccccCCccccceEEEEeHhhHhcCCCccc
Q 039665 200 KSDLFFVCMLRPRN----------FHIQKQDSEIAAAQWMQAEDYAAQPYVLK 242 (275)
Q Consensus 200 ~~~~~f~~~~~~~~----------~~~~~~~~E~~~~~Wv~~eel~~~~~~~~ 242 (275)
...++|++...... .....+++|+.+++|++++++.++.....
T Consensus 111 ~~~~~f~~~~~~~~~~~~l~~~~~~~~~~~~~E~~~~~W~~~~e~~~~~~~~~ 163 (364)
T 3fjy_A 111 KHTLYWMAQPISADDAEHLLDAFGPVHRADVGEINDIVWVSVREARKILSHST 163 (364)
T ss_dssp -CEEEEEEEECCHHHHHTTHHHHCCCCCCCTTTCCEEEEEEHHHHHHHCSCHH
T ss_pred eEEEEEEEEecCCccccccccccCccccCCccceeeeecCcHHHHHHHhcchh
Confidence 55667777654321 11234568999999999999998765443
No 69
>2dho_A Isopentenyl-diphosphate delta-isomerase 1; alpha/beta protein; 1.60A {Homo sapiens} PDB: 2i6k_A* 2icj_A 2ick_A*
Probab=99.70 E-value=1.8e-16 Score=136.65 Aligned_cols=111 Identities=19% Similarity=0.253 Sum_probs=83.7
Q ss_pred eEEEEEEEeCCceEEEEEEecCCCCCCCceeCc-ceeccCC------CC---HHHHHHHHHHHHhCCCcc-----eeEEE
Q 039665 124 VGVGAFVMNNKRELLVVQENNGALKGTGVWKLP-TGTIEEG------ED---ICAAAVREVKEETGIDTE-----FVEVL 188 (275)
Q Consensus 124 v~v~~vv~~~~~~vLLv~r~~~~~~~~~~w~lP-gG~ve~g------Es---~~~aA~REl~EEtGl~~~-----~~~~l 188 (275)
.++.++++|.+++|||+||...+...+|.|++| ||++++| |+ +.+||+||++||||+.+. .+..+
T Consensus 60 ~av~v~v~~~~g~lLLq~R~~~k~~~pg~W~~p~gG~v~~Ge~E~~~E~~~~~~~Aa~REl~EElGi~~~~v~~~~l~~l 139 (235)
T 2dho_A 60 RAFSVFLFNTENKLLLQQRSDAKITFPGCFTNTCCSHPLSNPAELEESDALGVRRAAQRRLKAELGIPLEEVPPEEINYL 139 (235)
T ss_dssp EEEEEEEECTTCCEEEEEECTTCSSSTTCEESSEEECCBSSHHHHCCGGGHHHHHHHHHHHHHHHCCCGGGSCGGGSEEE
T ss_pred EEEEEEEEcCCCEEEEEEecCcCCCCCCcEEeccCceecCCCcccccccchhHHHHHHHHHHHHHCCCccccChhhcEEE
Confidence 357788899889999999877665678999999 5999999 88 599999999999999875 24666
Q ss_pred EEEeeecc-cc----ceEEEEEEEEEecCCccccCCccccceEEEEeHhhHhcC
Q 039665 189 AFRQSHRS-FF----RKSDLFFVCMLRPRNFHIQKQDSEIAAAQWMQAEDYAAQ 237 (275)
Q Consensus 189 ~~~~~~~~-~~----~~~~~~f~~~~~~~~~~~~~~~~E~~~~~Wv~~eel~~~ 237 (275)
+.+..... .. ....++|++.. ...+.++++|+.+++|++++++.++
T Consensus 140 ~~~~y~~~~~~~~~~~e~~~vf~~~~---~~~~~~~~~Ev~~~~wv~~~el~~~ 190 (235)
T 2dho_A 140 TRIHYKAQSDGIWGEHEIDYILLVRM---NVTLNPDPNEIKSYCYVSKEELKEL 190 (235)
T ss_dssp EEEEEEEECSSSBEEEEEEEEEEEEC---CCCCCCCTTTEEEEEEECHHHHHHH
T ss_pred EEEEEeccCCCccceeEEEEEEEEEE---CCCCcCChHHEEEEEEEcHHHHHHH
Confidence 65442221 11 12345666653 2455667889999999999999875
No 70
>2pny_A Isopentenyl-diphosphate delta-isomerase 2; carotenoid biosynthesis, cholesterol biosynthesis, isomerase isoprene biosynthesis, lipid synthesis; HET: GOL; 1.81A {Homo sapiens}
Probab=99.69 E-value=1.8e-16 Score=137.41 Aligned_cols=110 Identities=16% Similarity=0.207 Sum_probs=83.2
Q ss_pred EEEEEEEeCCceEEEEEEecCCCCCCCceeCcc-eeccCC------CCH---HHHHHHHHHHHhCCCcc-----eeEEEE
Q 039665 125 GVGAFVMNNKRELLVVQENNGALKGTGVWKLPT-GTIEEG------EDI---CAAAVREVKEETGIDTE-----FVEVLA 189 (275)
Q Consensus 125 ~v~~vv~~~~~~vLLv~r~~~~~~~~~~w~lPg-G~ve~g------Es~---~~aA~REl~EEtGl~~~-----~~~~l~ 189 (275)
++.++++|.+++|||+||...+...+|.|++|+ |++++| |++ .+||+||++||||+.+. .+..++
T Consensus 72 av~v~v~~~~g~lLLqrRs~~K~~~pG~W~~p~gG~v~~G~~E~~~Et~~~~~eAA~REl~EElGi~~~~v~~~~l~~l~ 151 (246)
T 2pny_A 72 AFSVVLFNTKNRILIQQRSDTKVTFPGYFTDSCSSHPLYNPAELEEKDAIGVRRAAQRRLQAELGIPGEQISPEDIVFMT 151 (246)
T ss_dssp EEEEEEECTTCCEEEEEECTTCSSSTTCBCCSEEECCBSSHHHHCCGGGHHHHHHHHHHHHHHHCCCTTTCCGGGSEEEE
T ss_pred EEEEEEEeCCCEEEEEEecCCCCCCCCceEeccCceeccCCcccccccchhHHHHHHHHHHHHHCCCccccCccccEEEE
Confidence 577888998899999999876666789999995 999999 887 99999999999999865 245666
Q ss_pred EEeeec-cc--c--ceEEEEEEEEEecCCccccCCccccceEEEEeHhhHhcC
Q 039665 190 FRQSHR-SF--F--RKSDLFFVCMLRPRNFHIQKQDSEIAAAQWMQAEDYAAQ 237 (275)
Q Consensus 190 ~~~~~~-~~--~--~~~~~~f~~~~~~~~~~~~~~~~E~~~~~Wv~~eel~~~ 237 (275)
.+.... .. . +...++|++.. ..++.++++|+.+++|++++++.++
T Consensus 152 ~~~y~~~~~~~~~~~e~~~vf~~~~---~~~~~~~~~Ev~~~~wv~~eel~~~ 201 (246)
T 2pny_A 152 IYHHKAKSDRIWGEHEICYLLLVRK---NVTLNPDPSETKSILYLSQEELWEL 201 (246)
T ss_dssp EEEEEEESSSSBEEEEEEEEEEEEC---CCCCCCCTTTEEEEEEECHHHHHHH
T ss_pred EEEEEecCCCceeeeEEEEEEEEEE---CCCCCCChHHeeEEEEEeHHHHHHH
Confidence 543222 11 1 12345565543 2455667889999999999999875
No 71
>1u20_A U8 snoRNA-binding protein X29; modified nudix hydrolase fold, hydrolase; 2.10A {Xenopus laevis} SCOP: d.113.1.1 PDB: 2a8t_A* 2a8q_A* 2a8p_A* 2a8r_A* 2a8s_A*
Probab=99.62 E-value=3.4e-16 Score=132.77 Aligned_cols=105 Identities=15% Similarity=0.163 Sum_probs=76.8
Q ss_pred EEEEEEeCCceEEEEEEecCCCCCCCceeCcceeccCCC-CHHHHHHHHHHHHhCCCcceeE-----EEEEEeeeccccc
Q 039665 126 VGAFVMNNKRELLVVQENNGALKGTGVWKLPTGTIEEGE-DICAAAVREVKEETGIDTEFVE-----VLAFRQSHRSFFR 199 (275)
Q Consensus 126 v~~vv~~~~~~vLLv~r~~~~~~~~~~w~lPgG~ve~gE-s~~~aA~REl~EEtGl~~~~~~-----~l~~~~~~~~~~~ 199 (275)
+.+++++.+++|||++|. ++.|+||||++|+|| ++.+||+||++||||+.+.... .++.....+. ..
T Consensus 47 vv~~i~~~~~~vLl~~r~------~g~w~~PGG~ve~gE~t~~~aa~REl~EEtGl~~~~~~l~~~~~~~~~~~~~~-~~ 119 (212)
T 1u20_A 47 KLFDRVPIRRVLLMMMRF------DGRLGFPGGFVDTRDISLEEGLKRELEEELGPALATVEVTEDDYRSSQVREHP-QK 119 (212)
T ss_dssp EETTTEECCEEEEEEEET------TSCEECSEEEECTTTSCHHHHHHHHHHHHHCGGGGGCCCCGGGEEEEEEECTT-SC
T ss_pred EEEEEEecCCEEEEEEeC------CCeEECCCcccCCCCCCHHHHHHHHHHHHHCCCccccceeeeeEEEeccccCC-Cc
Confidence 445556778899998873 578999999999999 9999999999999999987553 4554444333 45
Q ss_pred eEEEEEEEEEecCCc--------cccCCccccceEEEEeHhhHhcC
Q 039665 200 KSDLFFVCMLRPRNF--------HIQKQDSEIAAAQWMQAEDYAAQ 237 (275)
Q Consensus 200 ~~~~~f~~~~~~~~~--------~~~~~~~E~~~~~Wv~~eel~~~ 237 (275)
...++|+|....... ....++.|..++.|+|++++.+.
T Consensus 120 ~~~~~f~~~~~~~~~~~~e~~~~~~~~~~~Ev~~~~wvpl~el~~~ 165 (212)
T 1u20_A 120 CVTHFYIKELKLEEIERIEAEAVNAKDHGLEVMGLIRVPLYTLRDR 165 (212)
T ss_dssp EEEEEEEEECCHHHHHHHHHHHTTSTTBTTTEEEEEECCCSBCTTS
T ss_pred EEEEEEEEEecCCCcccccccccccccCCcceEEEEEEEHHHhhhh
Confidence 667788876532110 01123567889999999999764
No 72
>3dup_A MUTT/nudix family protein; nudix superfamily hydrolase, hydrolase 3 family, structural protein structure initiative, PSI; HET: MSE; 1.80A {Rhodospirillum rubrum atcc 11170}
Probab=99.53 E-value=6.7e-14 Score=124.17 Aligned_cols=115 Identities=12% Similarity=0.098 Sum_probs=83.3
Q ss_pred eEEEEEEEeCCc---eEEEEEEecCCCCCCCce-eCcceeccCCCCHHHHHHHHHHHHhCCCcce---eEEEEEEeee--
Q 039665 124 VGVGAFVMNNKR---ELLVVQENNGALKGTGVW-KLPTGTIEEGEDICAAAVREVKEETGIDTEF---VEVLAFRQSH-- 194 (275)
Q Consensus 124 v~v~~vv~~~~~---~vLLv~r~~~~~~~~~~w-~lPgG~ve~gEs~~~aA~REl~EEtGl~~~~---~~~l~~~~~~-- 194 (275)
.+|-+.+++.++ ++||.||...+..++|.| .+++|++++||++.+||+||+.||+|+.+.. +..++.+...
T Consensus 119 ~~vh~~~~~~~~~~~~lll~rRs~~K~~~PG~wd~svaG~i~~GEs~~eaA~REl~EElGI~~~~~~~l~~~g~i~y~~~ 198 (300)
T 3dup_A 119 YGVHLNGYVGAGADLHLWIGRRSPDKSVAPGKLDNMVAGGQPADLSLRQNLIKECAEEADLPEALARQAIPVGAITYCME 198 (300)
T ss_dssp EEEEEEEEESCGGGCEEEEEEECTTCSSSTTCEEESEEEECCTTSCHHHHHHHHHHHHHCCCHHHHTTCEEEEEEEEEEE
T ss_pred EEEEEEEEEecCCeeEEEEEeCCCcccCCCCccccccccCCCCCCCHHHHHHHHHHHHhCCChhhhhhccccceEEEEEe
Confidence 356777787666 999999998888899999 5999999999999999999999999998753 2333332211
Q ss_pred -c-cccceEEEEEEEEEecCCccccCCccccceEEEEeHhhHhcCCC
Q 039665 195 -R-SFFRKSDLFFVCMLRPRNFHIQKQDSEIAAAQWMQAEDYAAQPY 239 (275)
Q Consensus 195 -~-~~~~~~~~~f~~~~~~~~~~~~~~~~E~~~~~Wv~~eel~~~~~ 239 (275)
. +......++|.+.+. ....+.++++|+.+++|++++|+.++..
T Consensus 199 ~~~G~~~E~~~vy~~~l~-~~~~p~~~~~EV~~~~~v~~~El~~~l~ 244 (300)
T 3dup_A 199 SPAGIKPDTLFLYDLALP-EDFRPHNTDGEMADFMLWPAAKVVEAVR 244 (300)
T ss_dssp ETTEEEEEEEEEEEEECC-TTCCCCCTTSSEEEEEEEEHHHHHHHHH
T ss_pred cCCCeEEEEEEEEEEEec-CCCcCCCCchHhheEEEECHHHHHHHHh
Confidence 1 111223344444333 2334466889999999999999987643
No 73
>1q33_A Pyrophosphatase, ADP-ribose pyrophosphatase; nudix fold, hydrolase; HET: BGC; 1.81A {Homo sapiens} SCOP: d.113.1.1 PDB: 1qvj_A*
Probab=99.53 E-value=1.5e-13 Score=121.91 Aligned_cols=114 Identities=13% Similarity=0.221 Sum_probs=70.0
Q ss_pred eEEEEEEecCCCCCCCceeCcceeccCCCCHHHHHHHHHHHHhCCCc------------ceeEEE---E--EEeee---c
Q 039665 136 ELLVVQENNGALKGTGVWKLPTGTIEEGEDICAAAVREVKEETGIDT------------EFVEVL---A--FRQSH---R 195 (275)
Q Consensus 136 ~vLLv~r~~~~~~~~~~w~lPgG~ve~gEs~~~aA~REl~EEtGl~~------------~~~~~l---~--~~~~~---~ 195 (275)
+|||++|.. .+.|.||||++++||++.+||+||++||||+.+ ....++ + .+... +
T Consensus 140 ~vLl~~r~~-----~g~W~lPGG~Ve~GEs~~eAA~REl~EETGl~~~~~~~~~~~l~~~l~~l~~~~g~~vy~~~~~dp 214 (292)
T 1q33_A 140 QFVAIKRKD-----CGEWAIPGGMVDPGEKISATLKREFGEEALNSLQKTSAEKREIEEKLHKLFSQDHLVIYKGYVDDP 214 (292)
T ss_dssp EEEEEECTT-----TCSEECCCEECCTTCCHHHHHHHHHHHHHSCGGGSCSSHHHHHHHHHHHHTTTSEEEEEEEECCCT
T ss_pred EEEEEEecC-----CCcEeCCCcccCCCCCHHHHHHHHHHHHhCCccccccccchhhHHHHHHHhhcccceeecccccCC
Confidence 699998873 478999999999999999999999999999983 111111 1 11111 1
Q ss_pred ccc---ceEEEEEEEEEecCC---ccccCCccccceEEEEeHhhHhcCCCcccchHHHHHHHHHHhhccC
Q 039665 196 SFF---RKSDLFFVCMLRPRN---FHIQKQDSEIAAAQWMQAEDYAAQPYVLKHQMFNYICQICLTKSEK 259 (275)
Q Consensus 196 ~~~---~~~~~~f~~~~~~~~---~~~~~~~~E~~~~~Wv~~eel~~~~~~~~~~~~~~~~~~~~~~~~~ 259 (275)
... .....+|++...... .......+|+.+++|++++++..+... .+.+++.+++.++.
T Consensus 215 r~~d~~~~~~~~f~~~~~~g~~~~~~~~~~~~E~~~~~W~~~del~~L~~~-----h~~il~~~~~~~~a 279 (292)
T 1q33_A 215 RNTDNAWMETEAVNYHDETGEIMDNLMLEAGDDAGKVKWVDINDKLKLYAS-----HSQFIKLVAEKRDA 279 (292)
T ss_dssp TCCSSEEEEEEEEEEEESSSTTTTTCCCCCCTTCSEEEEEECCTTCCCSTT-----HHHHHHHHHHHHTC
T ss_pred CCCcccEEEEEEEEEEeCCCccccccccCCCCccceEEEEEcccCcccCHh-----HHHHHHHHHHHhcC
Confidence 111 112334444432111 111234678999999999999876332 23445555554443
No 74
>3qsj_A Nudix hydrolase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 1.70A {Alicyclobacillus acidocaldarius subsp}
Probab=99.47 E-value=4.9e-13 Score=114.70 Aligned_cols=113 Identities=21% Similarity=0.275 Sum_probs=76.5
Q ss_pred ceeEEEEEEEeC--Cc--eEEEEEEecCCCCCCCceeCcceeccCCCC--------------------HHHHHHHHHHHH
Q 039665 122 HRVGVGAFVMNN--KR--ELLVVQENNGALKGTGVWKLPTGTIEEGED--------------------ICAAAVREVKEE 177 (275)
Q Consensus 122 ~~v~v~~vv~~~--~~--~vLLv~r~~~~~~~~~~w~lPgG~ve~gEs--------------------~~~aA~REl~EE 177 (275)
.+.++.+|++++ ++ +|||+||.......+|.|.||||++|++|+ +..||+||++||
T Consensus 7 ~r~aA~lill~~~~~g~~~vLl~~R~~~~~~~~g~~~fPGG~vd~~d~~~~~~~~g~~~~~~~~~~~a~~~aAiRE~~EE 86 (232)
T 3qsj_A 7 IRKAATLVVIRDGANKDIEVLVVRRAKTMRFLPGFVAFPGGAADPSDAEMAKRAFGRPVCAEDDDDPALAVTALRETAEE 86 (232)
T ss_dssp EEEEEEEEEEEECGGGCEEEEEEEECTTCSSSTTCEECSEEECCHHHHHHHHTCBSCCBTCCSTTHHHHHHHHHHHHHHH
T ss_pred CcceEEEEEEEcCCCCCeEEEEEEccCCCCCCCCcEECCceeEecCCCCchhhhcccccccccchhhHHHHHHHHHHHHH
Confidence 355666666663 23 899999987655468999999999999987 589999999999
Q ss_pred hCCCcceeE------------------------------------------EEEEEeeeccccc-eEEEEEEEEEecCCc
Q 039665 178 TGIDTEFVE------------------------------------------VLAFRQSHRSFFR-KSDLFFVCMLRPRNF 214 (275)
Q Consensus 178 tGl~~~~~~------------------------------------------~l~~~~~~~~~~~-~~~~~f~~~~~~~~~ 214 (275)
||+.+.... ..+.......... ....||++.+. ...
T Consensus 87 ~Gl~l~~~~~~~~~~~~~~~~~~r~~l~~~~~~f~~~~~~~~l~~~~~~L~~~arWiTP~~~~rRfdT~FFla~lp-q~~ 165 (232)
T 3qsj_A 87 IGWLLAVRDGEGTKMDTPLAPDEQADLCKGGDALSAWLSARGLAFDLGLLRRIGRFVTPPTQPVRFDTRFFLCVGQ-HLG 165 (232)
T ss_dssp HSCCCSEECTTCCBCCSCCCHHHHHHHTTCTTHHHHHHHTTTCEEBGGGCEEEEEEECCTTSSSEEEEEEEEEECS-SCC
T ss_pred hCceeccccccCcccChhhHHHHHHHHHcCchhHHHHHHHCCCccChhhceeeEEEcCCcCCceeEEEEEEEEECC-CCC
Confidence 999753211 1111111111112 34466666554 221
Q ss_pred cccCCccccceEEEEeHhhHh
Q 039665 215 HIQKQDSEIAAAQWMQAEDYA 235 (275)
Q Consensus 215 ~~~~~~~E~~~~~Wv~~eel~ 235 (275)
....+..|+.++.|++++|+.
T Consensus 166 ~v~~d~~E~~~~~W~~p~eal 186 (232)
T 3qsj_A 166 EPRLHGAELDAALWTPARDML 186 (232)
T ss_dssp CCCCCSSSEEEEEEEEHHHHH
T ss_pred CCCCCCCceEEEEEEcHHHHH
Confidence 124577899999999999995
No 75
>2xsq_A U8 snoRNA-decapping enzyme; hydrolase, mRNA decapping, mRNA turnover, structural genomic consortium, SGC; HET: IMP; 1.72A {Homo sapiens} PDB: 3cou_A 3mgm_A
Probab=99.42 E-value=1.2e-13 Score=117.55 Aligned_cols=94 Identities=19% Similarity=0.239 Sum_probs=64.5
Q ss_pred eEEEEEEecCCCCCCCceeCcceeccCCC-CHHHHHHHHHHHHhCCCcce--eEEEEEEeeecc-ccceEEEEEEEEEec
Q 039665 136 ELLVVQENNGALKGTGVWKLPTGTIEEGE-DICAAAVREVKEETGIDTEF--VEVLAFRQSHRS-FFRKSDLFFVCMLRP 211 (275)
Q Consensus 136 ~vLLv~r~~~~~~~~~~w~lPgG~ve~gE-s~~~aA~REl~EEtGl~~~~--~~~l~~~~~~~~-~~~~~~~~f~~~~~~ 211 (275)
++||+.|. ++.|+||||++|+|| ++.+||+||++||||+.+.. +..+..+..... ......++|+|.+..
T Consensus 66 ~~ll~~r~------~g~w~lPGG~ve~gE~t~~eaa~REl~EEtGl~~~~~~l~~l~~~~~~~~~~~~~~~~~f~~~l~~ 139 (217)
T 2xsq_A 66 AILMQMRF------DGRLGFPGGFVDTQDRSLEDGLNRELREELGEAAAAFRVERTDYRSSHVGSGPRVVAHFYAKRLTL 139 (217)
T ss_dssp EEEEEEET------TSCEECSEEECCTTCSSHHHHHHHHHHHHHCGGGGGCCCCGGGEEEEEECSSSSEEEEEEEEECCH
T ss_pred cEEEEEcc------CCeEECCceecCCCCCCHHHHHHHHHHHHHCCCCccceeEEEEEEeecCCCCCeEEEEEEEEEecc
Confidence 56665554 478999999999999 99999999999999999873 222222222222 224566777776542
Q ss_pred CCc--------cccCCccccceEEEEeHhhHh
Q 039665 212 RNF--------HIQKQDSEIAAAQWMQAEDYA 235 (275)
Q Consensus 212 ~~~--------~~~~~~~E~~~~~Wv~~eel~ 235 (275)
... .....+.|..++.|+|++++.
T Consensus 140 ~~~~~~e~~~~~~~~~~~E~~~v~~vPl~~l~ 171 (217)
T 2xsq_A 140 EELLAVEAGATRAKDHGLEVLGLVRVPLYTLR 171 (217)
T ss_dssp HHHHHHHHHGGGSTTBTTTEEEEEECCCSBCT
T ss_pred ccceecccccccccccCCceeeEEEEEHHHhh
Confidence 211 012235688999999999987
No 76
>3rh7_A Hypothetical oxidoreductase; FMN-binding split barrel, nudix, structural genomics, joint for structural genomics, JCSG; HET: FMN; 3.00A {Sinorhizobium meliloti}
Probab=99.39 E-value=2.9e-12 Score=114.88 Aligned_cols=116 Identities=12% Similarity=0.206 Sum_probs=83.9
Q ss_pred ceeEEEEEEEeCCceEEEEEEecCCCCCCCceeCcceeccCCCCHHHHHHHHHHHHh-CCCcceeEEEEEEeeeccccce
Q 039665 122 HRVGVGAFVMNNKRELLVVQENNGALKGTGVWKLPTGTIEEGEDICAAAVREVKEET-GIDTEFVEVLAFRQSHRSFFRK 200 (275)
Q Consensus 122 ~~v~v~~vv~~~~~~vLLv~r~~~~~~~~~~w~lPgG~ve~gEs~~~aA~REl~EEt-Gl~~~~~~~l~~~~~~~~~~~~ 200 (275)
+++.|++++.+ +|+|||+ . ..| |.||||.++.+++ ++|+||++||| |++++...+++.+.... .+.
T Consensus 182 p~~~vgaii~~-~g~vLL~--~-----~~G-W~LPG~~~~~~~~--~~a~RE~~EEttGl~v~~~~L~~v~~~~~--~~~ 248 (321)
T 3rh7_A 182 GEIRLGAVLEQ-QGAVFLA--G-----NET-LSLPNCTVEGGDP--ARTLAAYLEQLTGLNVTIGFLYSVYEDKS--DGR 248 (321)
T ss_dssp SCEEEEEEEES-SSCEEEB--C-----SSE-EBCCEEEESSSCH--HHHHHHHHHHHHSSCEEEEEEEEEEECTT--TCC
T ss_pred CcceEEEEEEE-CCEEEEe--e-----CCC-ccCCcccCCCChh--HHHHHHHHHHhcCCEEeeceEEEEEEcCC--Cce
Confidence 45667666665 6899999 2 247 9999886655444 59999999997 99999988888876543 234
Q ss_pred EEEEEEEEEecCCccccCCccccceEEEEeHhhHhcCCCcccchHHHHHHHHHHhhccCcc
Q 039665 201 SDLFFVCMLRPRNFHIQKQDSEIAAAQWMQAEDYAAQPYVLKHQMFNYICQICLTKSEKEY 261 (275)
Q Consensus 201 ~~~~f~~~~~~~~~~~~~~~~E~~~~~Wv~~eel~~~~~~~~~~~~~~~~~~~~~~~~~~~ 261 (275)
...+|.|.+.. +. ..+++|+++++++.+.+. .+-.+.+++.+++..+...
T Consensus 249 ~~i~f~~~~~~--g~-------~~e~~~f~~~elp~~~~~--~~~~~~~L~~y~~e~~~g~ 298 (321)
T 3rh7_A 249 QNIVYHALASD--GA-------PRQGRFLRPAELAAAKFS--SSATADIINRFVLESSIGN 298 (321)
T ss_dssp EEEEEEEEECS--SC-------CSSSEEECHHHHTTCEES--SHHHHHHHHHHHHTTSCSS
T ss_pred EEEEEEEEeCC--CC-------eeeeEEECHHHCCCcccC--CHHHHHHHHHHHHHhhcCC
Confidence 56788886642 22 277899999999987543 2357778888877665543
No 77
>3kvh_A Protein syndesmos; NUDT16-like, NUDT16L1, nudix, RNA regulation, RNA structural genomics consortium, SGC, RNA degradation, RNA B protein; 1.70A {Homo sapiens}
Probab=99.07 E-value=2.1e-10 Score=94.08 Aligned_cols=92 Identities=11% Similarity=0.116 Sum_probs=59.6
Q ss_pred EEEEEEecCCCCCCCceeCcceeccCCC-CHHHHHHHHHHHHhCC-CcceeEEEEEEeeeccccceEEEEEEEEEecCCc
Q 039665 137 LLVVQENNGALKGTGVWKLPTGTIEEGE-DICAAAVREVKEETGI-DTEFVEVLAFRQSHRSFFRKSDLFFVCMLRPRNF 214 (275)
Q Consensus 137 vLLv~r~~~~~~~~~~w~lPgG~ve~gE-s~~~aA~REl~EEtGl-~~~~~~~l~~~~~~~~~~~~~~~~f~~~~~~~~~ 214 (275)
|||+.|. .|.|+||||+||+|| ++++|+.||+.||+|+ .+....++......+. .....++|.|.+.....
T Consensus 46 iLmQ~R~------~G~weFPGGkVe~gE~t~e~aL~REl~EElg~~~V~~~~y~~s~~~~yp-~~V~LHfY~crl~~Ge~ 118 (214)
T 3kvh_A 46 VLMQMRF------DGLLGFPGGFVDRRFWSLEDGLNRVLGLGLGCLRLTEADYLSSHLTEGP-HRVVAHLYARQLTLEQL 118 (214)
T ss_dssp EEEEEET------TSCEECSEEEECTTTCCHHHHHHHSCCSCC---CCCGGGEEEEEEC-----CEEEEEEEEECCHHHH
T ss_pred EEEeeee------CCEEeCCCccCCCCCCCHHHHHHHHHHHhhCCeeeeeeeeEEEEeccCC-CEEEEEEEEEEeeCCcc
Confidence 5555554 589999999999999 9999999999999997 5666666655444333 35667888886542210
Q ss_pred ------cccCC--ccccceEEEEeHhhHh
Q 039665 215 ------HIQKQ--DSEIAAAQWMQAEDYA 235 (275)
Q Consensus 215 ------~~~~~--~~E~~~~~Wv~~eel~ 235 (275)
..... ..|.....-+|+=.+.
T Consensus 119 ~~lE~~A~~A~d~G~EvlGlvRVPlytl~ 147 (214)
T 3kvh_A 119 HAVEISAVHSRDHGLEVLGLVRVPLYTQK 147 (214)
T ss_dssp HHHHHHHHTSTTBTTTEEEEEEECCCBCT
T ss_pred chhhhcccCCcccCceecceEEeeeEEec
Confidence 01111 2466777778775554
No 78
>3bho_A Cleavage and polyadenylation specificity factor subunit 5; CPSF5, RNA processing, cleavage factor, diadenosine tetraphosphate, mRNA processing; HET: B4P; 1.80A {Homo sapiens} PDB: 3bap_A 3mdg_A 3mdi_A 2cl3_A 3n9u_A 3q2s_A 3q2t_A 2j8q_A 3p5t_A 3p6y_A
Probab=99.02 E-value=2.6e-09 Score=88.62 Aligned_cols=104 Identities=17% Similarity=0.170 Sum_probs=65.5
Q ss_pred eEEEEEE-EeCCc--eEEEEEEecCCCCCCCceeCcceeccCCCCHHHHHHHHHHHHhC------CCcceeEEEEEEeee
Q 039665 124 VGVGAFV-MNNKR--ELLVVQENNGALKGTGVWKLPTGTIEEGEDICAAAVREVKEETG------IDTEFVEVLAFRQSH 194 (275)
Q Consensus 124 v~v~~vv-~~~~~--~vLLv~r~~~~~~~~~~w~lPgG~ve~gEs~~~aA~REl~EEtG------l~~~~~~~l~~~~~~ 194 (275)
.+|.+++ .++.+ +|||+|+. .+.|.||||.+++||+..+|++||+.||+| ...+..+.+|.....
T Consensus 59 ~sV~avil~~~~~~phVLLlq~~------~~~f~LPGGkle~gE~~~eaL~REL~EELg~~~~~~~~~eIge~lg~wwRp 132 (208)
T 3bho_A 59 RTVEGVLIVHEHRLPHVLLLQLG------TTFFKLPGGELNPGEDEVEGLKRLMTEILGRQDGVLQDWVIDDCIGNWWRP 132 (208)
T ss_dssp EEEEEEEEEEETTEEEEEEEEEE------TTEEECSEEECCTTCCHHHHHHHHHHHHHCCCC-----CEEEEEEEEEEEC
T ss_pred eEEEEEEEEcCCCCcEEEEEEcC------CCcEECCCcccCCCCCHHHHHHHHHHHHhCCCcCCCccEEEhheEEEEecC
Confidence 3444444 44343 79999975 258999999999999999999999999999 455556777764322
Q ss_pred cc-------------ccceEEEEEEEEEecCCccccCCccccceEEEEeHhhHhc
Q 039665 195 RS-------------FFRKSDLFFVCMLRPRNFHIQKQDSEIAAAQWMQAEDYAA 236 (275)
Q Consensus 195 ~~-------------~~~~~~~~f~~~~~~~~~~~~~~~~E~~~~~Wv~~eel~~ 236 (275)
.. .-.....+|++.+.+.. .+... ...++.-+|+=||-+
T Consensus 133 ~fet~~YPYlP~Hit~pKE~~kly~V~Lp~~~-~f~vP--kn~kL~AvPLfely~ 184 (208)
T 3bho_A 133 NFEPPQYPYIPAHITKPKEHKKLFLVQLQEKA-LFAVP--KNYKLVAAPLFELYD 184 (208)
T ss_dssp SSSSCCBSSCCTTCCSCSEEEEEEEEECCSSE-EEEEE--TTCEEEEEEHHHHTT
T ss_pred CCCCcCCCCCCcccCchhhheeeeeEecCccc-eEecC--CCCeEEeecHHhhhc
Confidence 11 11244456666554322 11111 124456677777654
No 79
>3t3l_A Frataxin, mitochondrial; Fe-S cluster biosynthesis, human mitochondria, oxidoreductas; 1.15A {Homo sapiens} SCOP: d.82.2.1 PDB: 3s4m_A 3t3k_A 3t3j_A 3s5f_A 3t3x_A 3t3t_A 3s5e_A 3s5d_A 1ekg_A 1ly7_A
Probab=27.97 E-value=89 Score=23.38 Aligned_cols=53 Identities=9% Similarity=0.260 Sum_probs=35.7
Q ss_pred EEEEe---CCceEEEEEEecCCCCCCCceeCcceec---cCCCCHHHHHHHHHHHHhCCCcce
Q 039665 128 AFVMN---NKRELLVVQENNGALKGTGVWKLPTGTI---EEGEDICAAAVREVKEETGIDTEF 184 (275)
Q Consensus 128 ~vv~~---~~~~vLLv~r~~~~~~~~~~w~lPgG~v---e~gEs~~~aA~REl~EEtGl~~~~ 184 (275)
-+|+| +..+|.|--+.. ++..+.+-+|.. ..|+++.+...||+.+-+|..+.+
T Consensus 61 ~~VINkQ~P~~QIWLASp~S----Gp~hfd~~~~~Wi~~rdg~~L~~~L~~el~~~~g~~v~~ 119 (129)
T 3t3l_A 61 TYVINKQTPNKAIWLSSPSS----GPKRYDWTGKNWVYSHDGVSLHELLAAELTKALKTKLDL 119 (129)
T ss_dssp EEEEEEETTTTEEEEECSSS----CCEEEEECSSSEEETTTCCBHHHHHHHHHHHHHTSCCCC
T ss_pred EEEEeCCchhhHhheeCCCC----CCeeeEecCCEEEECCCCchHHHHHHHHHHHHhCCceee
Confidence 45555 445666665521 344555555533 358899999999999999987754
No 80
>1ew4_A CYAY protein; friedreich ataxia, frataxin family, iron homeostasis, unknown function; 1.40A {Escherichia coli} SCOP: d.82.2.1 PDB: 2eff_A 2p1x_A 1soy_A
Probab=22.69 E-value=1.1e+02 Score=22.06 Aligned_cols=32 Identities=13% Similarity=0.196 Sum_probs=23.7
Q ss_pred ceeCcceec---cCCCCHHHHHHHHHHHHhCCCcc
Q 039665 152 VWKLPTGTI---EEGEDICAAAVREVKEETGIDTE 183 (275)
Q Consensus 152 ~w~lPgG~v---e~gEs~~~aA~REl~EEtGl~~~ 183 (275)
.+.+-+|.. ..|+++.+...||+.+-+|..+.
T Consensus 70 hfd~~~~~Wi~~r~g~~L~~~L~~e~~~~~g~~v~ 104 (106)
T 1ew4_A 70 HFDLKGDEWICDRSGETFWDLLEQAATQQAGETVS 104 (106)
T ss_dssp EEEEETTEEEETTTCCBHHHHHHHHHHHHHTSCCC
T ss_pred eeeecCCEEEECCCCchHHHHHHHHHHHHhCCCcc
Confidence 334434444 35789999999999999998765
No 81
>2lic_A Vitellogenin; lipid transport; HET: SEP; NMR {Apis mellifera}
Probab=22.49 E-value=41 Score=18.39 Aligned_cols=7 Identities=71% Similarity=0.558 Sum_probs=2.9
Q ss_pred Ccccccc
Q 039665 6 ISTSGIS 12 (275)
Q Consensus 6 ~~~~~~~ 12 (275)
||+||+|
T Consensus 14 istssss 20 (35)
T 2lic_A 14 ISTSSSS 20 (35)
T ss_dssp SCSCSSC
T ss_pred ccccccc
Confidence 4444433
Done!