Query 039667
Match_columns 107
No_of_seqs 100 out of 324
Neff 4.9
Searched_HMMs 29240
Date Mon Mar 25 20:47:27 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/039667.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/039667hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3eqt_A ATP-dependent RNA helic 95.1 0.011 3.7E-07 42.8 2.4 93 7-101 10-104 (145)
2 3ga3_A Interferon-induced heli 95.0 0.026 8.9E-07 40.3 4.3 87 10-100 12-100 (133)
3 3lrr_A Probable ATP-dependent 94.0 0.026 9E-07 39.5 2.3 89 7-99 2-94 (121)
4 2qfd_A Probable ATP-dependent 93.3 0.11 3.8E-06 37.5 4.5 81 7-99 24-116 (145)
5 3e0o_A Peptide methionine sulf 93.2 0.031 1.1E-06 40.4 1.5 67 8-82 40-106 (144)
6 4a2v_A RIG-I, retinoic acid in 92.9 0.062 2.1E-06 38.2 2.7 89 7-99 4-97 (131)
7 3hcg_A Peptide methionine sulf 92.5 0.057 1.9E-06 39.1 2.1 68 8-82 41-108 (146)
8 2kv1_A Methionine-R-sulfoxide 92.3 0.078 2.7E-06 37.5 2.6 65 8-80 18-82 (124)
9 2kao_A Methionine-R-sulfoxide 91.9 0.1 3.4E-06 36.9 2.8 65 8-80 18-82 (124)
10 3cxk_A Methionine-R-sulfoxide 91.7 0.053 1.8E-06 39.9 1.1 67 8-81 71-137 (164)
11 2k8d_A Peptide methionine sulf 90.7 0.049 1.7E-06 39.7 0.2 68 8-82 59-126 (151)
12 3mao_A Methionine-R-sulfoxide 90.3 0.092 3.2E-06 36.1 1.2 65 8-80 11-75 (105)
13 3hcj_A MSRB, peptide methionin 88.6 0.051 1.7E-06 39.7 -1.2 68 8-82 48-115 (154)
14 3e0m_A Peptide methionine sulf 88.2 0.15 5.1E-06 40.9 1.2 68 8-82 207-274 (313)
15 2l1u_A MSRB2, methionine-R-sul 83.8 0.25 8.4E-06 35.6 0.4 67 8-82 35-109 (143)
16 4gl2_A Interferon-induced heli 67.5 1.1 3.7E-05 36.8 -0.1 91 4-99 580-673 (699)
17 1fv5_A First zinc finger of U- 61.3 1.1 3.7E-05 24.3 -0.8 23 5-27 3-25 (36)
18 1x6m_A GFA, glutathione-depend 57.5 10 0.00035 27.3 3.7 35 47-82 80-114 (196)
19 2ykg_A Probable ATP-dependent 55.6 5.7 0.00019 32.4 2.2 86 10-99 578-667 (696)
20 1srk_A Zinc finger protein ZFP 52.7 2.5 8.4E-05 20.5 -0.3 21 6-26 3-23 (35)
21 2elm_A Zinc finger protein 406 52.4 2.4 8.2E-05 21.3 -0.4 20 6-25 5-24 (37)
22 2lvu_A Zinc finger and BTB dom 56.8 3.1 0.00011 18.7 0.0 19 9-27 1-19 (26)
23 2elx_A Zinc finger protein 406 49.7 2.8 9.4E-05 20.2 -0.4 21 6-26 3-23 (35)
24 2elp_A Zinc finger protein 406 48.9 4.3 0.00015 19.9 0.3 21 6-26 5-26 (37)
25 2elq_A Zinc finger protein 406 48.0 3.2 0.00011 20.3 -0.3 21 6-26 5-25 (36)
26 2elo_A Zinc finger protein 406 47.7 2.5 8.5E-05 20.8 -0.8 22 5-26 4-25 (37)
27 2elv_A Zinc finger protein 406 46.9 3.4 0.00012 20.2 -0.3 21 6-26 5-25 (36)
28 2m0e_A Zinc finger and BTB dom 46.0 4.5 0.00015 18.1 0.1 19 9-27 1-19 (29)
29 2elt_A Zinc finger protein 406 44.5 3.8 0.00013 19.9 -0.4 21 6-26 5-25 (36)
30 1p7a_A BF3, BKLF, kruppel-like 44.4 2.9 9.9E-05 20.5 -0.8 21 6-26 7-27 (37)
31 2kvh_A Zinc finger and BTB dom 44.0 3.4 0.00012 18.8 -0.6 18 9-26 2-19 (27)
32 2epc_A Zinc finger protein 32; 43.8 3.8 0.00013 20.7 -0.4 22 6-27 7-28 (42)
33 1rik_A E6APC1 peptide; E6-bind 43.1 4.8 0.00017 18.3 -0.1 18 9-26 1-18 (29)
34 2els_A Zinc finger protein 406 42.9 4.2 0.00014 19.8 -0.3 21 6-26 5-25 (36)
35 2drp_A Protein (tramtrack DNA- 42.6 3.3 0.00011 23.2 -0.9 26 2-27 2-27 (66)
36 1njq_A Superman protein; zinc- 42.5 4 0.00014 20.4 -0.5 21 7-27 3-23 (39)
37 2lvr_A Zinc finger and BTB dom 47.8 5.5 0.00019 18.1 0.0 19 9-27 2-20 (30)
38 2en2_A B-cell lymphoma 6 prote 40.9 4.3 0.00015 20.5 -0.5 21 6-26 7-27 (42)
39 1nyp_A Pinch protein; LIM doma 40.7 8 0.00027 22.3 0.6 11 11-21 32-42 (66)
40 2lvt_A Zinc finger and BTB dom 46.3 6 0.0002 18.1 0.0 19 9-27 1-19 (29)
41 2yu5_A Zinc finger protein 473 40.1 7.5 0.00025 19.8 0.4 22 6-27 8-29 (44)
42 2elr_A Zinc finger protein 406 39.7 3.9 0.00013 19.8 -0.8 21 6-26 5-25 (36)
43 1iz6_A Initiation factor 5A; S 39.3 18 0.0006 25.1 2.3 32 30-61 33-64 (138)
44 2kvf_A Zinc finger and BTB dom 39.1 4.4 0.00015 18.4 -0.6 18 9-26 2-19 (28)
45 2iyb_E Testin, TESS, TES; LIM 38.5 7.9 0.00027 22.5 0.4 13 9-21 31-43 (65)
46 3fac_A Putative uncharacterize 37.3 18 0.00061 23.6 2.0 18 63-80 64-81 (118)
47 2m0d_A Zinc finger and BTB dom 37.2 5 0.00017 18.1 -0.6 18 9-26 2-19 (30)
48 2eoy_A Zinc finger protein 473 36.9 8.9 0.0003 19.8 0.4 22 6-27 8-29 (46)
49 2ely_A Zinc finger protein 224 36.9 10 0.00035 19.5 0.7 22 6-27 8-29 (46)
50 1ogy_B Diheme cytochrome C NAP 36.8 13 0.00043 26.3 1.3 29 8-36 93-121 (130)
51 1x61_A Thyroid receptor intera 36.7 12 0.00041 21.8 1.0 11 11-21 34-44 (72)
52 2yu8_A Zinc finger protein 347 36.6 9.1 0.00031 19.7 0.4 22 6-27 8-29 (46)
53 2eif_A IF-5A, protein (eukaryo 36.5 21 0.00073 24.5 2.4 30 32-61 39-68 (136)
54 4a2w_A RIG-I, retinoic acid in 35.7 7.8 0.00027 33.9 0.0 67 10-80 812-882 (936)
55 2eos_A B-cell lymphoma 6 prote 35.4 5 0.00017 20.3 -0.8 22 6-27 7-28 (42)
56 1klr_A Zinc finger Y-chromosom 35.4 5.8 0.0002 17.9 -0.5 18 10-27 2-19 (30)
57 2epw_A Zinc finger protein 268 34.9 9.9 0.00034 19.5 0.4 22 6-27 8-29 (46)
58 3iuf_A Zinc finger protein UBI 34.9 6.6 0.00023 21.0 -0.4 22 6-27 3-24 (48)
59 2emb_A Zinc finger protein 473 34.5 7.3 0.00025 19.9 -0.2 21 6-26 8-28 (44)
60 2eoo_A ZFP-95, zinc finger pro 34.2 7.8 0.00027 20.0 -0.2 22 6-27 8-29 (46)
61 2ept_A Zinc finger protein 32; 34.1 8 0.00027 19.4 -0.1 21 6-26 6-26 (41)
62 1paa_A Yeast transcription fac 33.8 5.4 0.00019 18.2 -0.8 17 10-26 2-18 (30)
63 2kvg_A Zinc finger and BTB dom 33.6 4.6 0.00016 18.5 -1.1 17 9-25 2-18 (27)
64 2yte_A Zinc finger protein 473 33.6 5.6 0.00019 20.0 -0.8 22 6-27 6-27 (42)
65 2el5_A Zinc finger protein 268 33.5 7.2 0.00025 19.6 -0.4 22 6-27 6-27 (42)
66 2en3_A ZFP-95, zinc finger pro 33.3 11 0.00037 19.4 0.4 22 6-27 8-29 (46)
67 2eox_A Zinc finger protein 473 33.2 9.6 0.00033 19.4 0.1 22 6-27 8-29 (44)
68 2yts_A Zinc finger protein 484 33.0 7.7 0.00026 19.9 -0.3 22 6-27 8-29 (46)
69 2m0f_A Zinc finger and BTB dom 33.0 6 0.0002 17.8 -0.7 18 9-26 1-18 (29)
70 2epv_A Zinc finger protein 268 32.6 8.1 0.00028 19.8 -0.3 22 6-27 8-29 (44)
71 2d8z_A Four and A half LIM dom 32.4 13 0.00043 21.6 0.6 11 11-21 32-42 (70)
72 2eor_A Zinc finger protein 224 32.4 7.8 0.00027 19.9 -0.4 22 6-27 8-29 (46)
73 1vd4_A Transcription initiatio 32.1 17 0.00059 20.3 1.1 19 6-24 10-28 (62)
74 2ytg_A ZFP-95, zinc finger pro 32.1 11 0.00039 19.3 0.3 22 6-27 8-29 (46)
75 2emj_A Zinc finger protein 28 32.1 8.5 0.00029 19.9 -0.2 22 6-27 8-29 (46)
76 2ytf_A Zinc finger protein 268 32.0 8.2 0.00028 19.8 -0.3 22 6-27 8-29 (46)
77 2em8_A Zinc finger protein 224 31.9 8.2 0.00028 19.9 -0.3 22 5-26 7-28 (46)
78 2emx_A Zinc finger protein 268 31.9 8.8 0.0003 19.5 -0.2 22 6-27 6-27 (44)
79 1x68_A FHL5 protein; four-and- 31.8 14 0.00049 21.9 0.8 9 13-21 8-16 (76)
80 1bkb_A Translation initiation 31.8 28 0.00095 23.9 2.3 30 32-61 37-66 (136)
81 2eow_A Zinc finger protein 347 31.7 8.9 0.0003 19.7 -0.2 22 6-27 8-29 (46)
82 3cpf_A Eukaryotic translation 31.6 23 0.00078 24.4 1.9 32 30-61 33-64 (138)
83 2em7_A Zinc finger protein 224 31.5 8.9 0.0003 19.7 -0.2 22 6-27 8-29 (46)
84 3uk3_C Zinc finger protein 217 31.5 5.4 0.00018 21.4 -1.2 21 7-27 1-21 (57)
85 2eof_A Zinc finger protein 268 31.3 8.8 0.0003 19.4 -0.3 22 6-27 8-29 (44)
86 1x4l_A Skeletal muscle LIM-pro 31.2 16 0.00053 21.4 0.9 11 11-21 36-46 (72)
87 2el4_A Zinc finger protein 268 31.2 9 0.00031 19.6 -0.2 22 6-27 8-29 (46)
88 2egq_A FHL1 protein; LIM domai 31.1 10 0.00034 22.5 -0.0 11 12-22 17-27 (77)
89 2xqn_T Testin, TESS; metal-bin 31.0 17 0.00057 23.6 1.1 27 10-42 30-56 (126)
90 2en1_A Zinc finger protein 224 30.9 7 0.00024 20.2 -0.7 21 6-26 8-28 (46)
91 2emm_A ZFP-95, zinc finger pro 30.9 8.9 0.00031 19.6 -0.3 21 6-26 8-28 (46)
92 2ctu_A Zinc finger protein 483 30.8 26 0.0009 19.2 1.8 23 6-28 14-36 (73)
93 2cur_A Skeletal muscle LIM-pro 30.8 14 0.00049 21.4 0.6 11 11-21 32-42 (69)
94 2eml_A Zinc finger protein 28 30.7 9 0.00031 19.7 -0.3 22 6-27 8-29 (46)
95 2yso_A ZFP-95, zinc finger pro 30.7 10 0.00035 19.5 -0.0 23 5-27 7-29 (46)
96 2yrm_A B-cell lymphoma 6 prote 30.6 6.8 0.00023 20.1 -0.8 22 6-27 6-27 (43)
97 3er0_A Eukaryotic translation 30.5 35 0.0012 24.6 2.8 31 31-61 58-88 (167)
98 2yrj_A Zinc finger protein 473 30.4 9.7 0.00033 19.5 -0.2 22 6-27 8-29 (46)
99 2ep2_A Zinc finger protein 484 30.3 9.2 0.00032 19.7 -0.3 22 6-27 8-29 (46)
100 2em5_A ZFP-95, zinc finger pro 30.3 9.1 0.00031 19.7 -0.3 22 6-27 8-29 (46)
101 2ehe_A Four and A half LIM dom 30.3 14 0.00049 22.1 0.6 17 12-28 17-33 (82)
102 2em2_A Zinc finger protein 28 30.1 9.2 0.00032 19.7 -0.3 22 6-27 8-29 (46)
103 2em4_A Zinc finger protein 28 30.1 9.3 0.00032 19.7 -0.3 22 6-27 8-29 (46)
104 2enc_A Zinc finger protein 224 30.0 9.3 0.00032 19.6 -0.3 22 5-26 7-28 (46)
105 1wyh_A SLIM 2, skeletal muscle 30.0 20 0.00069 20.7 1.2 11 11-21 34-44 (72)
106 2enf_A Zinc finger protein 347 30.0 7.8 0.00027 20.0 -0.6 22 6-27 8-29 (46)
107 2emp_A Zinc finger protein 347 29.9 9.8 0.00033 19.5 -0.2 22 6-27 8-29 (46)
108 1a7i_A QCRP2 (LIM1); LIM domai 29.9 23 0.00077 21.2 1.5 11 11-21 35-45 (81)
109 2enh_A Zinc finger protein 28 29.9 11 0.00036 19.5 -0.1 22 6-27 8-29 (46)
110 2ep3_A Zinc finger protein 484 29.8 9.3 0.00032 19.6 -0.3 22 6-27 8-29 (46)
111 2ytp_A Zinc finger protein 484 29.8 9.8 0.00034 19.6 -0.2 22 6-27 8-29 (46)
112 2eme_A Zinc finger protein 473 29.7 9 0.00031 19.6 -0.4 22 6-27 8-29 (46)
113 2emi_A Zinc finger protein 484 29.5 9.8 0.00034 19.5 -0.3 22 6-27 8-29 (46)
114 2em3_A Zinc finger protein 28 29.5 9.7 0.00033 19.6 -0.3 22 6-27 8-29 (46)
115 2eq0_A Zinc finger protein 347 29.4 10 0.00035 19.5 -0.2 22 6-27 8-29 (46)
116 2eon_A ZFP-95, zinc finger pro 29.2 7.6 0.00026 20.2 -0.8 22 6-27 8-29 (46)
117 2emg_A Zinc finger protein 484 29.2 7.8 0.00027 20.0 -0.7 22 6-27 8-29 (46)
118 2yth_A Zinc finger protein 224 29.1 7.9 0.00027 20.0 -0.7 22 6-27 8-29 (46)
119 1yui_A GAGA-factor; complex (D 29.0 9.1 0.00031 20.7 -0.5 21 6-26 20-40 (54)
120 2ene_A Zinc finger protein 347 29.0 9.5 0.00033 19.6 -0.4 22 6-27 8-29 (46)
121 2ytk_A Zinc finger protein 347 28.9 9.8 0.00034 19.5 -0.3 22 6-27 8-29 (46)
122 2ep0_A Zinc finger protein 28 28.8 9.4 0.00032 19.6 -0.4 22 6-27 8-29 (46)
123 2em9_A Zinc finger protein 224 28.8 10 0.00034 19.4 -0.3 22 6-27 8-29 (46)
124 2el6_A Zinc finger protein 268 28.5 10 0.00036 19.5 -0.3 22 6-27 8-29 (46)
125 2ytj_A Zinc finger protein 484 28.5 9.6 0.00033 19.6 -0.4 22 6-27 8-29 (46)
126 2yto_A Zinc finger protein 484 28.4 11 0.00036 19.5 -0.2 22 6-27 8-29 (46)
127 2ema_A Zinc finger protein 347 28.4 10 0.00034 19.5 -0.3 22 6-27 8-29 (46)
128 2emf_A Zinc finger protein 484 28.4 10 0.00035 19.5 -0.3 22 6-27 8-29 (46)
129 2ytb_A Zinc finger protein 32; 28.3 8.1 0.00028 19.3 -0.7 22 6-27 7-28 (42)
130 2en8_A Zinc finger protein 224 28.3 11 0.00036 19.3 -0.3 22 6-27 8-29 (46)
131 3izc_U 60S ribosomal protein R 28.2 29 0.001 25.1 2.0 35 29-63 55-96 (160)
132 2eom_A ZFP-95, zinc finger pro 28.2 8.6 0.00029 19.9 -0.7 23 5-27 7-29 (46)
133 1ard_A Yeast transcription fac 27.9 6.2 0.00021 17.8 -1.2 17 10-26 2-18 (29)
134 2ytn_A Zinc finger protein 347 27.8 9 0.00031 19.7 -0.6 22 6-27 8-29 (46)
135 2emh_A Zinc finger protein 484 27.8 11 0.00037 19.4 -0.3 22 6-27 8-29 (46)
136 2epu_A Zinc finger protein 32; 27.8 8.3 0.00028 19.8 -0.8 21 6-26 8-28 (45)
137 2eop_A Zinc finger protein 268 27.5 8.7 0.0003 19.7 -0.7 22 6-27 8-29 (46)
138 2ysp_A Zinc finger protein 224 27.5 9.6 0.00033 19.6 -0.5 21 6-26 8-28 (46)
139 2eq4_A Zinc finger protein 224 27.5 9.3 0.00032 19.6 -0.6 22 6-27 8-29 (46)
140 2emz_A ZFP-95, zinc finger pro 27.1 9 0.00031 19.8 -0.7 22 6-27 8-29 (46)
141 2epx_A Zinc finger protein 28 27.1 9.3 0.00032 19.6 -0.6 22 6-27 8-29 (47)
142 2eoh_A Zinc finger protein 28 27.0 8.7 0.0003 19.8 -0.8 22 6-27 8-29 (46)
143 2emy_A Zinc finger protein 268 27.0 11 0.00039 19.3 -0.3 22 6-27 8-29 (46)
144 2em6_A Zinc finger protein 224 26.7 9.7 0.00033 19.6 -0.6 22 6-27 8-29 (46)
145 2eod_A TNF receptor-associated 26.5 22 0.00075 19.8 0.9 17 7-23 33-50 (66)
146 2eln_A Zinc finger protein 406 26.4 12 0.00041 19.9 -0.3 21 6-26 5-27 (38)
147 2en7_A Zinc finger protein 268 26.4 7.9 0.00027 19.6 -1.0 22 6-27 8-29 (44)
148 2emk_A Zinc finger protein 28 26.3 9.7 0.00033 19.6 -0.7 22 6-27 8-29 (46)
149 2ytq_A Zinc finger protein 268 26.3 10 0.00034 19.6 -0.6 22 6-27 8-29 (46)
150 2en9_A Zinc finger protein 28 26.0 9.2 0.00032 19.7 -0.8 22 6-27 8-29 (46)
151 2elz_A Zinc finger protein 224 26.0 10 0.00034 19.6 -0.7 22 6-27 8-29 (46)
152 2en6_A Zinc finger protein 268 26.0 10 0.00035 19.5 -0.6 22 6-27 8-29 (46)
153 2ep1_A Zinc finger protein 484 25.8 8.6 0.00029 19.7 -0.9 22 6-27 8-29 (46)
154 2eoj_A Zinc finger protein 268 25.7 8.7 0.0003 19.5 -0.9 22 6-27 8-29 (44)
155 2epq_A POZ-, at HOOK-, and zin 25.5 7.6 0.00026 20.0 -1.2 22 6-27 6-27 (45)
156 1jni_A NAPB;, diheme cytochrom 25.2 17 0.00057 25.4 0.2 28 8-35 92-119 (123)
157 1twf_J DNA-directed RNA polyme 25.2 8.3 0.00028 24.5 -1.2 18 65-82 3-20 (70)
158 2eoz_A Zinc finger protein 473 25.2 11 0.00037 19.4 -0.6 22 6-27 8-29 (46)
159 2em0_A Zinc finger protein 224 25.1 11 0.00037 19.4 -0.6 22 6-27 8-29 (46)
160 2epz_A Zinc finger protein 28 24.8 10 0.00035 19.5 -0.8 22 6-27 8-29 (46)
161 2ytd_A Zinc finger protein 473 24.8 13 0.00046 19.0 -0.2 21 6-26 8-28 (46)
162 3hks_A EIF-5A-2, eukaryotic tr 24.1 43 0.0015 24.1 2.3 31 31-61 56-86 (167)
163 4gzn_C ZFP-57, zinc finger pro 23.7 13 0.00044 21.6 -0.5 20 7-26 29-48 (60)
164 2eq3_A Zinc finger protein 347 23.6 9 0.00031 19.6 -1.1 22 6-27 8-29 (46)
165 2cu8_A Cysteine-rich protein 2 23.5 21 0.00071 21.1 0.4 11 11-21 37-47 (76)
166 3jyw_Q 60S ribosomal protein L 23.5 21 0.0007 24.7 0.4 34 29-62 54-94 (116)
167 2eov_A Zinc finger protein 484 23.5 12 0.0004 19.1 -0.7 22 6-27 8-29 (46)
168 2eoe_A Zinc finger protein 347 23.4 9.1 0.00031 19.6 -1.1 22 6-27 8-29 (46)
169 2eq1_A Zinc finger protein 347 23.3 12 0.0004 19.2 -0.7 22 6-27 8-29 (46)
170 1iml_A CRIP, cysteine rich int 23.3 31 0.0011 20.3 1.2 25 10-40 27-51 (76)
171 1bbo_A Human enhancer-binding 23.2 14 0.00049 19.6 -0.3 21 6-26 25-45 (57)
172 2eps_A POZ-, at HOOK-, and zin 23.2 14 0.00047 20.0 -0.4 22 6-27 8-29 (54)
173 1x3h_A Leupaxin; paxillin fami 23.1 34 0.0012 20.2 1.3 11 11-21 42-52 (80)
174 1g47_A Pinch protein; LIM doma 23.1 20 0.00069 21.0 0.3 16 12-27 13-28 (77)
175 1x6o_A Eukaryotic initiation f 23.1 40 0.0014 24.4 1.9 32 30-61 57-88 (174)
176 2eq2_A Zinc finger protein 347 23.0 9.2 0.00031 19.7 -1.2 22 6-27 8-29 (46)
177 2yti_A Zinc finger protein 347 22.9 9.1 0.00031 19.7 -1.2 22 6-27 8-29 (46)
178 2d9h_A Zinc finger protein 692 22.5 15 0.00051 21.0 -0.4 21 6-26 3-23 (78)
179 3sjl_A Methylamine utilization 22.2 17 0.00059 29.2 -0.2 30 5-34 23-60 (373)
180 2eou_A Zinc finger protein 473 22.0 12 0.00042 19.0 -0.8 22 6-27 8-29 (44)
181 2eoq_A Zinc finger protein 224 22.0 13 0.00043 19.1 -0.8 22 6-27 8-29 (46)
182 1loi_A Cyclic 3',5'-AMP specif 21.8 12 0.00041 19.3 -0.8 14 65-78 4-19 (26)
183 1wig_A KIAA1808 protein; LIM d 21.8 33 0.0011 20.3 1.1 11 11-21 32-42 (73)
184 1ncs_A Peptide M30F, transcrip 21.7 43 0.0015 17.3 1.5 22 6-27 14-37 (47)
185 1rim_A E6APC2 peptide; E6-bind 21.6 9.9 0.00034 18.4 -1.2 18 9-26 1-18 (33)
186 1va1_A Transcription factor SP 21.4 16 0.00056 17.8 -0.3 21 6-26 4-26 (37)
187 2ytm_A Zinc finger protein 28 21.4 11 0.00036 19.5 -1.2 22 6-27 8-29 (46)
188 2ct1_A Transcriptional repress 20.8 19 0.00064 20.6 -0.2 22 6-27 11-32 (77)
189 1bhi_A CRE-BP1, ATF-2; CRE bin 20.5 17 0.00059 17.6 -0.4 20 7-26 3-24 (38)
190 2ytr_A Zinc finger protein 347 20.3 11 0.00036 19.3 -1.3 22 6-27 8-29 (46)
191 2dar_A PDZ and LIM domain prot 20.2 36 0.0012 20.8 1.1 9 12-20 27-35 (90)
192 2yt9_A Zinc finger-containing 20.2 25 0.00086 20.5 0.3 23 6-28 3-25 (95)
193 1x63_A Skeletal muscle LIM-pro 20.2 37 0.0013 20.1 1.1 16 12-27 17-32 (82)
194 1x5w_A Zinc finger protein 64, 20.2 18 0.00061 20.3 -0.4 22 6-27 5-26 (70)
195 1x4k_A Skeletal muscle LIM-pro 20.1 31 0.001 19.9 0.7 16 12-27 7-22 (72)
No 1
>3eqt_A ATP-dependent RNA helicase DHX58; innate immunity, RIG-I-like helicases, viral RNA detection, LGP2/dsRNA complex, ATP-binding, coiled coil; 2.00A {Homo sapiens} PDB: 2w4r_A 2rqa_A
Probab=95.07 E-value=0.011 Score=42.81 Aligned_cols=93 Identities=17% Similarity=0.255 Sum_probs=54.9
Q ss_pred CCCeEEeccCCCCCCCCCCeeee--ceeCCCceEEEeecccccccCCccceeeceecEEEeeeecccCCCceeeeEEeec
Q 039667 7 GPRRYSCYRCRNLVSCHEDIVSK--GFQASSGRAFLFSHAANIVEGPKEDQHLLTGLHTVADVYCADCGELLGWTYKRAF 84 (107)
Q Consensus 7 g~~~y~C~~C~thLa~~~~liSk--~f~G~~G~AyLf~~v~Nv~~g~~e~r~m~TG~h~V~DI~C~~C~~~lGWkY~~A~ 84 (107)
..-.+.|++|.+.++..+||-.- +-+=.-+++| ...+.+..+|..-.....+...-..|.|.+|+..+|-....--
T Consensus 10 s~vkllCrkC~~~~C~g~DIr~ie~~HhVnv~p~F--~~~y~~~~~~~~~~k~f~d~~~~g~I~C~~Cgq~WG~~m~yk~ 87 (145)
T 3eqt_A 10 EHVQLLCINCMVAVGHGSDLRKVEGTHHVNVNPNF--SNYYNVSRDPVVINKVFKDWKPGGVISCRNCGEVWGLQMIYKS 87 (145)
T ss_dssp GGCEEEETTTCCEEEEGGGEEEETTTEEEECCGGG--GGGEEEEEEECCCSSCCSSEEEEEEEEETTTCCEEEEEEEETT
T ss_pred hheEEECCCCCeeEEeccceEEeccceEEeeChhh--eeeEEeccCCCCCCcccccccCCcEEEchhhChhhHhhEEecc
Confidence 34469999999999999997433 1111111111 2233332222211111344566788999999999997765543
Q ss_pred ccccccccccEEEEecc
Q 039667 85 EESQKYKEGKIVLEKFK 101 (107)
Q Consensus 85 e~sqkYKEGkfIlE~~~ 101 (107)
-+==-.|.-.|++|-..
T Consensus 88 ~~LP~LkIksFVve~~~ 104 (145)
T 3eqt_A 88 VKLPVLKVRSMLLETPQ 104 (145)
T ss_dssp EEEEEECGGGEEEEETT
T ss_pred ccCceEeEEEEEEEcCC
Confidence 33445677788887643
No 2
>3ga3_A Interferon-induced helicase C domain-containing protein 1, MDA5; innate immune receptor, RNA biniding, RLR, alternative splicing, antiviral defense; 1.45A {Homo sapiens} PDB: 2rqb_A
Probab=95.04 E-value=0.026 Score=40.27 Aligned_cols=87 Identities=16% Similarity=0.205 Sum_probs=54.5
Q ss_pred eEEeccCCCCCCCCCCeeee--ceeCCCceEEEeecccccccCCccceeeceecEEEeeeecccCCCceeeeEEeecccc
Q 039667 10 RYSCYRCRNLVSCHEDIVSK--GFQASSGRAFLFSHAANIVEGPKEDQHLLTGLHTVADVYCADCGELLGWTYKRAFEES 87 (107)
Q Consensus 10 ~y~C~~C~thLa~~~~liSk--~f~G~~G~AyLf~~v~Nv~~g~~e~r~m~TG~h~V~DI~C~~C~~~lGWkY~~A~e~s 87 (107)
.+.|++|.+.+++.+||-.- +-.=.-+++| ...+.+..-+...+. ..+...-..|.|. |+..+|-....---+=
T Consensus 12 kllCrkC~~~~C~g~DIR~ie~~HhVnv~p~F--~~~y~~~~~~~~~k~-f~d~~~~g~I~C~-Cgq~WG~~m~yk~~~L 87 (133)
T 3ga3_A 12 TFLCKNCSVLACSGEDIHVIEKMHHVNMTPEF--KELYIVRENKALQKK-CADYQINGEIICK-CGQAWGTMMVHKGLDL 87 (133)
T ss_dssp EEEETTTCCEEEEGGGCEEETTTEEECCCTGG--GGSEEEECCTTTCEE-CSSCEEEEEEEET-TSCEEEEEEEETTEEE
T ss_pred EEEccCCCeeEEeccceEEeccceEEeeChhh--eeeEEecCCCCccch-hccccCCceEEEe-cCChhhhhEEeccccC
Confidence 58999999999999997432 2221122222 233444422222233 4667788899999 9999997765443334
Q ss_pred cccccccEEEEec
Q 039667 88 QKYKEGKIVLEKF 100 (107)
Q Consensus 88 qkYKEGkfIlE~~ 100 (107)
=-.|.-.|++|-.
T Consensus 88 P~LkIksFVve~~ 100 (133)
T 3ga3_A 88 PCLKIRNFVVVFK 100 (133)
T ss_dssp EEECGGGEEEEET
T ss_pred ceEEEEEEEEEcC
Confidence 4567777877763
No 3
>3lrr_A Probable ATP-dependent RNA helicase DDX58; innate immunity, viral RNA, RIG-I like receptors, antiviral ATP-binding, helicase, hydrolase; HET: ATP; 2.15A {Homo sapiens} PDB: 3lrn_A* 3og8_A 2rmj_A 3ncu_A*
Probab=94.04 E-value=0.026 Score=39.54 Aligned_cols=89 Identities=21% Similarity=0.374 Sum_probs=55.4
Q ss_pred CCCeEEeccCCCCCCCCCCeee--eceeCCCceEEEeecccccccCCccceeeceecEEEeeeecc--cCCCceeeeEEe
Q 039667 7 GPRRYSCYRCRNLVSCHEDIVS--KGFQASSGRAFLFSHAANIVEGPKEDQHLLTGLHTVADVYCA--DCGELLGWTYKR 82 (107)
Q Consensus 7 g~~~y~C~~C~thLa~~~~liS--k~f~G~~G~AyLf~~v~Nv~~g~~e~r~m~TG~h~V~DI~C~--~C~~~lGWkY~~ 82 (107)
|...+.|++|.+.+++.+||-. .+-+=.-+++| ...+.+...+. .+. .-+.+.-..|.|. +|++.+|-....
T Consensus 2 ~~~~llC~kC~~~~C~g~DIr~ie~~HhVnv~p~F--~~~y~~~~~~~-~k~-f~d~~~~g~I~C~~~~Cg~~WG~~m~y 77 (121)
T 3lrr_A 2 ENKKLLCRKCKALACYTADVRVIEESHYTVLGDAF--KECFVSRPHPK-PKQ-FSSFEKRAKIFCARQNCSHDWGIHVKY 77 (121)
T ss_dssp CCEEEEETTTCCEEEEGGGEEEETTTEEEECSHHH--HTTEEEEECSS-CCE-ETTEEEEEEEEECSTTTCCEEEEEEEE
T ss_pred CCEEEECCCCCeEEEeccceEEeecceEEeeChhh--eeeEEecCCCC-Cch-hhcccCCcEEEeCccccChhhhheEEe
Confidence 5667999999999999999733 22111112221 22233322222 222 2356778889999 999999977655
Q ss_pred ecccccccccccEEEEe
Q 039667 83 AFEESQKYKEGKIVLEK 99 (107)
Q Consensus 83 A~e~sqkYKEGkfIlE~ 99 (107)
---+==-.|.-.|++|-
T Consensus 78 k~~~LP~LkI~sfvve~ 94 (121)
T 3lrr_A 78 KTFEIPVIKIESFVVED 94 (121)
T ss_dssp TTEEEEEECGGGEEEEE
T ss_pred ccccCceEEEEEEEEEe
Confidence 43334456777888876
No 4
>2qfd_A Probable ATP-dependent RNA helicase DDX58; zinc finger, alternative splicing, antiviral defense, ATP- binding, hydrolase, immune response; 2.70A {Homo sapiens} PDB: 2qfb_A
Probab=93.25 E-value=0.11 Score=37.49 Aligned_cols=81 Identities=22% Similarity=0.420 Sum_probs=53.3
Q ss_pred CCCeEEeccCCCCCCCCCCe----------eeeceeCCCceEEEeecccccccCCccceeeceecEEEeeeecc--cCCC
Q 039667 7 GPRRYSCYRCRNLVSCHEDI----------VSKGFQASSGRAFLFSHAANIVEGPKEDQHLLTGLHTVADVYCA--DCGE 74 (107)
Q Consensus 7 g~~~y~C~~C~thLa~~~~l----------iSk~f~G~~G~AyLf~~v~Nv~~g~~e~r~m~TG~h~V~DI~C~--~C~~ 74 (107)
+.-.+.|++|.+.+++.+|| +.+.|. ..+.+..-+...+ .-+...-..|+|. +|+.
T Consensus 24 ~~v~llCrkC~~~~C~g~DIrvie~~HhV~v~p~F~----------~~y~v~~~~~~k~--f~d~~~~g~I~C~~~~Cg~ 91 (145)
T 2qfd_A 24 ENKKLLCRKCKALACYTADVRVIEECHYTVLGDAFK----------ECFVSRPHPKPKQ--FSSFEKRAKIFCARQNCSH 91 (145)
T ss_dssp CCCEEEETTTCCEEEEGGGEEEETTTEEEECSTTGG----------GTEEEEECSSCCC--CSSEEEEEEEEECSTTTCC
T ss_pred cceEEEccCCCeeEEcccceeEecCCcEEecCcCce----------eeEEEcCCcccch--hhceeCCceEEeCCcccCc
Confidence 34459999999999999998 334443 2222221111111 4445677899999 9999
Q ss_pred ceeeeEEeecccccccccccEEEEe
Q 039667 75 LLGWTYKRAFEESQKYKEGKIVLEK 99 (107)
Q Consensus 75 ~lGWkY~~A~e~sqkYKEGkfIlE~ 99 (107)
.+|-.-..---+-=-.|.-.|+||.
T Consensus 92 ~WG~~m~yk~~~lP~LkIksFVv~~ 116 (145)
T 2qfd_A 92 DWGIHVKYKTFEIPVIKIESFVVED 116 (145)
T ss_dssp EEEEEEEETTEEEEEECGGGEEEEC
T ss_pred chhceEEEccccCceEEEEEEEEEe
Confidence 9997665433334456778888885
No 5
>3e0o_A Peptide methionine sulfoxide reductase MSRB; oxidoreductase; 2.60A {Bacillus subtilis} SCOP: b.88.1.3 PDB: 1xm0_A 2kzn_A
Probab=93.20 E-value=0.031 Score=40.45 Aligned_cols=67 Identities=15% Similarity=0.170 Sum_probs=43.2
Q ss_pred CCeEEeccCCCCCCCCCCeeeeceeCCCceEEEeecccccccCCccceeeceecEEEeeeecccCCCceeeeEEe
Q 039667 8 PRRYSCYRCRNLVSCHEDIVSKGFQASSGRAFLFSHAANIVEGPKEDQHLLTGLHTVADVYCADCGELLGWTYKR 82 (107)
Q Consensus 8 ~~~y~C~~C~thLa~~~~liSk~f~G~~G~AyLf~~v~Nv~~g~~e~r~m~TG~h~V~DI~C~~C~~~lGWkY~~ 82 (107)
+-+|.|+.|.++|=++++ .|....|=--.+..+-+ .+...+|++ -|+.. ..|.|..|+..||=-...
T Consensus 40 ~G~Y~C~~Cg~pLF~S~~----KfdSg~GWPSF~~pi~~-~v~~~~D~s--~gm~R-tEV~C~~Cg~HLGHVF~D 106 (144)
T 3e0o_A 40 EGLYVDIVSGKPLFTSKD----KFDSQCGWPSFTKPIEE-EVEEKLDTS--HGMIR-TEVRSRTADSHLGHVFND 106 (144)
T ss_dssp SEEEEETTTCCEEEETTT----BCCCTTSSCEESCCSTT-TEEEEEECC--TTSCE-EEEEETTTCCEEEEEESC
T ss_pred CEEEEeCCCCcccccCcc----cccCCCCCcccCchhcc-ceEEeecCC--CCceE-EEEEcCCCCCccCCccCC
Confidence 457999999999877653 46655665444444444 333334432 24433 479999999999966643
No 6
>4a2v_A RIG-I, retinoic acid inducible protein I; hydrolase, superfamily 2 RNA helicase, ATP and dsRNA binding antiviral signalling pathway; 1.44A {Anas platyrhynchos} PDB: 4a2x_A
Probab=92.86 E-value=0.062 Score=38.17 Aligned_cols=89 Identities=21% Similarity=0.368 Sum_probs=51.9
Q ss_pred CCCeEEeccCCCCCCCCCCeee--eceeCCCceEEEeecccccccCCccceeeceecEEEeeeecc--cCCCceeeeEEe
Q 039667 7 GPRRYSCYRCRNLVSCHEDIVS--KGFQASSGRAFLFSHAANIVEGPKEDQHLLTGLHTVADVYCA--DCGELLGWTYKR 82 (107)
Q Consensus 7 g~~~y~C~~C~thLa~~~~liS--k~f~G~~G~AyLf~~v~Nv~~g~~e~r~m~TG~h~V~DI~C~--~C~~~lGWkY~~ 82 (107)
|...+.|++|.+.+++.+||-. .+-+=.-+++| ...+.+..-+. .+. .-+.+.-..|.|. +|++.+|-....
T Consensus 4 ~~~kllCrkC~~~vC~g~DIr~ie~~HhVnv~p~F--~~~y~~~~~~~-~k~-f~d~~~~g~I~C~~~~Cg~~WG~~m~y 79 (131)
T 4a2v_A 4 GQKNLLCGKCKAYACSTDDIRIIKDSHHIVLGEAF--KERYTTKPHKK-PMQ-FDGFEKKSKMYCRNNNCQHDWGITVKY 79 (131)
T ss_dssp -CCEEEETTTCCEEEEGGGEEEETTTEEEECSSGG--GGGEEEEECCC-CCC-TTSEEEEEEEEESCTTTCCEEEEEEEE
T ss_pred cceEEEccCCCeeEEeccceEEeecceEEeeChhh--eeeEEecCCCC-Cch-hhcccCCcEEEeCccccChhhhhhEee
Confidence 4567999999999999999733 22111111111 12222222221 121 2355678889999 999998876543
Q ss_pred eccc-ccccccccEEEEe
Q 039667 83 AFEE-SQKYKEGKIVLEK 99 (107)
Q Consensus 83 A~e~-sqkYKEGkfIlE~ 99 (107)
---+ ==-.|.-.|++|-
T Consensus 80 k~~~~LP~LkIksFVve~ 97 (131)
T 4a2v_A 80 LTFDNLPVIKIKSFVMES 97 (131)
T ss_dssp TTEEEEEEECGGGEEECC
T ss_pred cCcccCceEeEEEEEEEe
Confidence 2222 2246777788775
No 7
>3hcg_A Peptide methionine sulfoxide reductase MSRA/MSRB; PILB, methionine sulfoxide reductase B, reduced form, disulfide bond; 1.82A {Neisseria meningitidis serogroup A} SCOP: b.88.1.3 PDB: 3hch_A* 1l1d_A
Probab=92.48 E-value=0.057 Score=39.11 Aligned_cols=68 Identities=10% Similarity=0.125 Sum_probs=42.7
Q ss_pred CCeEEeccCCCCCCCCCCeeeeceeCCCceEEEeecccccccCCccceeeceecEEEeeeecccCCCceeeeEEe
Q 039667 8 PRRYSCYRCRNLVSCHEDIVSKGFQASSGRAFLFSHAANIVEGPKEDQHLLTGLHTVADVYCADCGELLGWTYKR 82 (107)
Q Consensus 8 ~~~y~C~~C~thLa~~~~liSk~f~G~~G~AyLf~~v~Nv~~g~~e~r~m~TG~h~V~DI~C~~C~~~lGWkY~~ 82 (107)
+-+|.|+.|.++|=+++ ..|....|=.-.+..+-.-.+...+|++ -|+.. ..|.|..|+..||=-...
T Consensus 41 ~G~Y~C~~Cg~pLF~S~----~KFdSg~GWPSF~~pi~~~~v~~~~D~s--~gm~R-tEV~C~~Cg~HLGHVF~D 108 (146)
T 3hcg_A 41 PGIYVDVVSGEPLFSSA----DKYDSGCGWPSFTRPIDAKSVTEHDDFS--YNMRR-TEVRSHAADSHLGHVFPD 108 (146)
T ss_dssp SEEEEETTTCCEEEEGG----GEECCSSSSCEESSCSSGGGEEEEEEEE--TTEEE-EEEEETTTCCEEEEEESC
T ss_pred CEEEEecCCCcccccCc----ccccCCCCChhhccccCCCceEEeecCC--CCcEE-EEEEeCCCCCccCceeCC
Confidence 45899999999987665 3566666654445444221122233433 24433 478999999999966644
No 8
>2kv1_A Methionine-R-sulfoxide reductase B1; MSRB1, SELR, metal-binding, nucleus, oxidoreductase, seleniu; NMR {Mus musculus}
Probab=92.33 E-value=0.078 Score=37.46 Aligned_cols=65 Identities=18% Similarity=0.317 Sum_probs=38.3
Q ss_pred CCeEEeccCCCCCCCCCCeeeeceeCCCceEEEeecccccccCCccceeeceecEEEeeeecccCCCceeeeE
Q 039667 8 PRRYSCYRCRNLVSCHEDIVSKGFQASSGRAFLFSHAANIVEGPKEDQHLLTGLHTVADVYCADCGELLGWTY 80 (107)
Q Consensus 8 ~~~y~C~~C~thLa~~~~liSk~f~G~~G~AyLf~~v~Nv~~g~~e~r~m~TG~h~V~DI~C~~C~~~lGWkY 80 (107)
+-+|.|+.|.++|=++++= |....|=.-.+..+-.-.+-..+++ .|.. ...|.|+.|+..||=-.
T Consensus 18 ~G~Y~C~~Cg~pLF~S~~K----fdSg~GWPSF~~~i~~~~v~~~~d~---~~~~-r~Ev~C~~Cg~HLGHVF 82 (124)
T 2kv1_A 18 PGVYVCAKCSYELFSSHSK----YAHSSPWPAFTETIHPDSVTKCPEK---NRPE-ALKVSCGKCGNGLGHEF 82 (124)
T ss_dssp CEEEEETTTCCBCCCTTSC----CCCCSSSCCBSCCCCCSSCEEEECS---SSTT-CEEEECTTTTCCCEEEC
T ss_pred CEEEEecCCCCcccccCCc----ccCCCCCceeecccccceEEEEecc---CCce-EEEEEEecCCCccCCcc
Confidence 3589999999999887653 5555554333333321111111222 1221 35799999999999544
No 9
>2kao_A Methionine-R-sulfoxide reductase B1; mouse reduced methionine sulfoxide reductase B1 (MSRB1) (SEC95Cys mutant, selenocysteine; NMR {Mus musculus} PDB: 2kv1_A
Probab=91.93 E-value=0.1 Score=36.91 Aligned_cols=65 Identities=18% Similarity=0.324 Sum_probs=38.6
Q ss_pred CCeEEeccCCCCCCCCCCeeeeceeCCCceEEEeecccccccCCccceeeceecEEEeeeecccCCCceeeeE
Q 039667 8 PRRYSCYRCRNLVSCHEDIVSKGFQASSGRAFLFSHAANIVEGPKEDQHLLTGLHTVADVYCADCGELLGWTY 80 (107)
Q Consensus 8 ~~~y~C~~C~thLa~~~~liSk~f~G~~G~AyLf~~v~Nv~~g~~e~r~m~TG~h~V~DI~C~~C~~~lGWkY 80 (107)
+-+|.|+.|.++|=++++ .|....|=.-.+..+..-.+...+|.. ++ .-..|.|..|+..||=-.
T Consensus 18 ~GiY~C~~Cg~pLF~S~~----KFdSG~GWPSF~~pi~~~~v~~~~D~~---~~-~RtEV~C~~Cg~HLGHVF 82 (124)
T 2kao_A 18 PGVYVCAKCSYELFSSHS----KYAHSSPWPAFTETIHPDSVTKCPEKN---RP-EALKVSCGKCGNGLGHEF 82 (124)
T ss_dssp CCEEEESSSCCCCCCTTT----SCCCCCSSCCBSCCCCCSSCEEEECSS---CT-TCEEEECTTTTCCCEEEC
T ss_pred CEEEEeCCCCCccccCcc----cccCCCCChhhCccCCccceEEEecCC---CC-CEEEEEeCCCCCcCCccC
Confidence 458999999999988774 355444543333333211111111211 11 136899999999999655
No 10
>3cxk_A Methionine-R-sulfoxide reductase; structural genomics, MSRB, oxidoreductase, MIC labcard, PSI-2, protein structure initiative; 1.70A {Burkholderia pseudomallei strain} PDB: 3cez_A
Probab=91.66 E-value=0.053 Score=39.95 Aligned_cols=67 Identities=22% Similarity=0.444 Sum_probs=42.5
Q ss_pred CCeEEeccCCCCCCCCCCeeeeceeCCCceEEEeecccccccCCccceeeceecEEEeeeecccCCCceeeeEE
Q 039667 8 PRRYSCYRCRNLVSCHEDIVSKGFQASSGRAFLFSHAANIVEGPKEDQHLLTGLHTVADVYCADCGELLGWTYK 81 (107)
Q Consensus 8 ~~~y~C~~C~thLa~~~~liSk~f~G~~G~AyLf~~v~Nv~~g~~e~r~m~TG~h~V~DI~C~~C~~~lGWkY~ 81 (107)
.-+|.|+.|.++|=.+++ .|....|=.-.+..+-+-.+...+|+. -|+. -..|.|..|+..||=-..
T Consensus 71 ~GiY~C~~Cg~pLF~S~~----KFdSGcGWPSF~~pi~~~~V~~~~D~s--~gm~-RtEV~C~~Cg~HLGHVF~ 137 (164)
T 3cxk_A 71 AGIYHCVVCGTALFESGA----KYHSGCGWPSYFKPIDGEVIDEKMDYT--HGMT-RVEVRCNQCGAHLGHVFE 137 (164)
T ss_dssp SEEEEETTTCCEEEEGGG----BCCCCSSSCEESSCSSTTSEEEEEECG--GGCC-EEEEEETTTCCEEEEEES
T ss_pred CeEEEccCCCccccCCch----hccCCCCCcccCcccCCCceEEeECCC--CCcE-EEEEEeCCCCCccCcccC
Confidence 348999999999877653 466556655445444322222333332 2443 447999999999996554
No 11
>2k8d_A Peptide methionine sulfoxide reductase MSRB; thermophilic, Zn binding, metal-binding, oxidoreductase; NMR {Methanothermobacter thermautotrophicusorganism_taxid}
Probab=90.74 E-value=0.049 Score=39.67 Aligned_cols=68 Identities=22% Similarity=0.447 Sum_probs=43.1
Q ss_pred CCeEEeccCCCCCCCCCCeeeeceeCCCceEEEeecccccccCCccceeeceecEEEeeeecccCCCceeeeEEe
Q 039667 8 PRRYSCYRCRNLVSCHEDIVSKGFQASSGRAFLFSHAANIVEGPKEDQHLLTGLHTVADVYCADCGELLGWTYKR 82 (107)
Q Consensus 8 ~~~y~C~~C~thLa~~~~liSk~f~G~~G~AyLf~~v~Nv~~g~~e~r~m~TG~h~V~DI~C~~C~~~lGWkY~~ 82 (107)
.-+|.|+.|.++|=++++ .|....|=.-.+..+-.-.+...+|+. -|+.. ..|.|..|+..||--...
T Consensus 59 ~G~Y~C~~Cg~pLF~S~~----KFdSg~GWPSF~~pi~~~~V~~~~D~s--~gm~R-tEV~C~~Cg~HLGHVF~D 126 (151)
T 2k8d_A 59 DGIYRCICCGTDLFDSET----KFDSGTGWPSFYDVVSEHNIKLREDRS--LGMVR-CEVLCARCDAHLGHVFDD 126 (151)
T ss_dssp CSEEEETTTTEEEEEGGG----SCCSTTCCSEESCCSCTTSEECCCCBT--TSSCE-EEEEETTEEEEEEEEEEC
T ss_pred CEEEEecCCCCcccCCcc----cccCCCCCcccCcccCCCceEEeeCCC--CCceE-EEEEeCCCCCcCCcccCC
Confidence 458999999999876653 576666654445544321222333332 24433 479999999999966654
No 12
>3mao_A Methionine-R-sulfoxide reductase B1; oxidoreductase, structural genomics consortium, SGC, cytoplasm, metal-binding, nucleus, selenocysteine, zinc; HET: MLI; 1.42A {Homo sapiens}
Probab=90.27 E-value=0.092 Score=36.09 Aligned_cols=65 Identities=18% Similarity=0.355 Sum_probs=39.2
Q ss_pred CCeEEeccCCCCCCCCCCeeeeceeCCCceEEEeecccccccCCccceeeceecEEEeeeecccCCCceeeeE
Q 039667 8 PRRYSCYRCRNLVSCHEDIVSKGFQASSGRAFLFSHAANIVEGPKEDQHLLTGLHTVADVYCADCGELLGWTY 80 (107)
Q Consensus 8 ~~~y~C~~C~thLa~~~~liSk~f~G~~G~AyLf~~v~Nv~~g~~e~r~m~TG~h~V~DI~C~~C~~~lGWkY 80 (107)
+-+|.|+.|.++|=.+++ .|....|=.-.+..+-.-.+...++. .++ .-..|.|..|+..||--.
T Consensus 11 ~G~Y~C~~Cg~pLF~S~~----KFdSg~GWPSF~~pi~~~~v~~~~D~---~~~-~RtEV~C~~C~~HLGHVF 75 (105)
T 3mao_A 11 PGVYVCAKCGYELFSSRS----KYAHSSPWPAFTETIHADSVAKRPEH---NRS-EALKVSCGKCGNGLGHEF 75 (105)
T ss_dssp SEEEEETTTCCEEEEGGG----EECCSSSSCEESCCSSTTSEEEEECT---TST-TEEEEEETTTCCEEEEEE
T ss_pred CEEEEcCCCCCccccCCc----ccCCCCCChhhccccCCCceEEEecC---CCC-CEEEEEeCCCCCccCccc
Confidence 447999999999866653 46655565444444321111111121 121 236899999999999665
No 13
>3hcj_A MSRB, peptide methionine sulfoxide reductase; methionine sulfoxide reductase B, oxidized form, oxidoreductase; 1.66A {Xanthomonas campestris PV} PDB: 3hci_A*
Probab=88.60 E-value=0.051 Score=39.69 Aligned_cols=68 Identities=19% Similarity=0.383 Sum_probs=39.4
Q ss_pred CCeEEeccCCCCCCCCCCeeeeceeCCCceEEEeecccccccCCccceeeceecEEEeeeecccCCCceeeeEEe
Q 039667 8 PRRYSCYRCRNLVSCHEDIVSKGFQASSGRAFLFSHAANIVEGPKEDQHLLTGLHTVADVYCADCGELLGWTYKR 82 (107)
Q Consensus 8 ~~~y~C~~C~thLa~~~~liSk~f~G~~G~AyLf~~v~Nv~~g~~e~r~m~TG~h~V~DI~C~~C~~~lGWkY~~ 82 (107)
.-+|.|+.|.++|=.+++ .|....|=--.+..+-.-.+...+|.+ -|+.. ..|.|..|+..||=-...
T Consensus 48 ~G~Y~C~~Cg~pLF~S~~----KFdSg~GWPSF~~pi~~~~v~~~~D~s--~gm~R-tEV~C~~Cg~HLGHVF~D 115 (154)
T 3hcj_A 48 DGVYTCRLCGLPLFRSNA----KFDSGTGWPSFFAPYDPAHVREIRDTS--YGMIR-TEIVCARCDSHLGHVFPD 115 (154)
T ss_dssp SEEEEETTTCCEEEEECT----TCCCCTTSSTTEEESCGGGEEEECCTT--TTTSC-EEEEETTTCCEEEEEESC
T ss_pred CEEEEccCCCCccccCcc----cccCCCCCcccccccCccceEEeecCC--CCceE-EEEEeCCCCCccCCccCC
Confidence 358999999999976653 455555543333333211111122221 13322 579999999999966543
No 14
>3e0m_A Peptide methionine sulfoxide reductase MSRA/MSRB 1; fusion, msrab, linker, hinge, cell membrane, membrane, multifunctional enzyme, oxidoreductase; 2.40A {Streptococcus pneumoniae}
Probab=88.18 E-value=0.15 Score=40.88 Aligned_cols=68 Identities=12% Similarity=0.099 Sum_probs=42.1
Q ss_pred CCeEEeccCCCCCCCCCCeeeeceeCCCceEEEeecccccccCCccceeeceecEEEeeeecccCCCceeeeEEe
Q 039667 8 PRRYSCYRCRNLVSCHEDIVSKGFQASSGRAFLFSHAANIVEGPKEDQHLLTGLHTVADVYCADCGELLGWTYKR 82 (107)
Q Consensus 8 ~~~y~C~~C~thLa~~~~liSk~f~G~~G~AyLf~~v~Nv~~g~~e~r~m~TG~h~V~DI~C~~C~~~lGWkY~~ 82 (107)
+-+|.|+.|.++|=+++ ..|....|=--.+..+-.-.+...+|+++ |+.. ..|.|..|+..||=-...
T Consensus 207 ~G~Y~c~~cg~pLF~S~----~KfdSg~GWPSF~~~i~~~~v~~~~D~s~--gm~R-tEv~c~~c~~HLGHVF~D 274 (313)
T 3e0m_A 207 EGIYVDITTGEPLFFAK----DKFASGCGWPSFSRPLSKELIHYYKDLSH--GMER-IEVRSRSGSAHLGHVFTD 274 (313)
T ss_dssp SEEEEETTTCCEEEEGG----GBCCCCSSSCEESSCSSGGGEEEEEECCT--TCCE-EEEEESSSCCEEEEEESC
T ss_pred CeEEEecCCCccccCCC----ccccCCCCCcccCcccCCCceEEeecCCC--CcEE-EEEECCCCCCccCcccCC
Confidence 45899999999986664 35666666544444442211222233321 4432 589999999999966543
No 15
>2l1u_A MSRB2, methionine-R-sulfoxide reductase B2, mitochondria; methionine sulfoxide reductase, oxidoreductase; NMR {Mus musculus}
Probab=83.80 E-value=0.25 Score=35.62 Aligned_cols=67 Identities=18% Similarity=0.305 Sum_probs=39.3
Q ss_pred CCeEEeccCCCCCCCCCCeeeeceeCCCceEEEeeccccc--------ccCCccceeeceecEEEeeeecccCCCceeee
Q 039667 8 PRRYSCYRCRNLVSCHEDIVSKGFQASSGRAFLFSHAANI--------VEGPKEDQHLLTGLHTVADVYCADCGELLGWT 79 (107)
Q Consensus 8 ~~~y~C~~C~thLa~~~~liSk~f~G~~G~AyLf~~v~Nv--------~~g~~e~r~m~TG~h~V~DI~C~~C~~~lGWk 79 (107)
+-+|.|+.|.++|=++++ .|....|=.-.+..+ ++ .+...+|+ .-|+.. ..|.|..|+..||=-
T Consensus 35 ~G~Y~C~~Cg~pLF~S~~----KFdSg~GWPSF~~pi-~~~~~~~~~~~V~~~~D~--s~gm~R-tEV~C~~Cg~HLGHV 106 (143)
T 2l1u_A 35 TGMYHCVCCDSPLFSSEK----KYCSGTGWPSFSEAY-GSKGSDESHTGILRRLDT--SLGCPR-MEVVCKQCEAHLGHV 106 (143)
T ss_dssp CEEEEESSSSCEEEEGGG----BCTTTTCCSBBSSCC-SCCTTHHHHTCEEEEEEC--TTSSCE-EEEEESSSCCCCEEE
T ss_pred CeEEEeCCCCCeeecCcc----cccCCCCChhhchhh-ccccccCCCCceEEeecc--cCCceE-EEEEECCCCCcCCcc
Confidence 457999999999876654 465445543333333 11 11112222 123332 479999999999966
Q ss_pred EEe
Q 039667 80 YKR 82 (107)
Q Consensus 80 Y~~ 82 (107)
+..
T Consensus 107 F~D 109 (143)
T 2l1u_A 107 FPD 109 (143)
T ss_dssp ECC
T ss_pred cCC
Confidence 643
No 16
>4gl2_A Interferon-induced helicase C domain-containing P; MDA5, dsRNA, anti-viral signaling, RIG-I, MAVS, oligomerizat helicase, ATPase; HET: ANP; 3.56A {Homo sapiens}
Probab=67.55 E-value=1.1 Score=36.77 Aligned_cols=91 Identities=18% Similarity=0.190 Sum_probs=43.3
Q ss_pred ecCCCCeEEeccCCCCCCCCCCeee--eceeCCCceEEEeecccccccCCc-cceeeceecEEEeeeecccCCCceeeeE
Q 039667 4 NLIGPRRYSCYRCRNLVSCHEDIVS--KGFQASSGRAFLFSHAANIVEGPK-EDQHLLTGLHTVADVYCADCGELLGWTY 80 (107)
Q Consensus 4 ~l~g~~~y~C~~C~thLa~~~~liS--k~f~G~~G~AyLf~~v~Nv~~g~~-e~r~m~TG~h~V~DI~C~~C~~~lGWkY 80 (107)
|........|.+|.+.++..+||-. .+-+=.-.++| .....+. .+. ..+ ..-+......|.|. |+..+|-.+
T Consensus 580 ~~~~~~~~~c~~c~~~~~~~~d~~~~~~~~~~~~~~~~--~~~~~~~-~~~~~~~-~~~~~~~~~~~~c~-~~~~~g~~~ 654 (699)
T 4gl2_A 580 NNPSLITFLCKNCSVLACSGEDIHVIEKMHHVNMTPEF--KELYIVR-ENKTLQK-KCADYQINGEIICK-CGQAWGTMM 654 (699)
T ss_dssp --CCSEEEEESSSCCEEEEGGGCEEETTTEEECCCHHH--HHHCEEC-----------------CEEECS-SSCEEEEEC
T ss_pred cCcceeEEECCCCCcEEEehhheeeeccCceEeeCcch--hhheeec-CCCccch-hhhccccCCcEEee-cCchhhHHe
Confidence 3333445789999999999999743 21111111111 2333333 222 122 24566778889999 999999665
Q ss_pred EeecccccccccccEEEEe
Q 039667 81 KRAFEESQKYKEGKIVLEK 99 (107)
Q Consensus 81 ~~A~e~sqkYKEGkfIlE~ 99 (107)
..---+==-.|.=.|++|.
T Consensus 655 ~~~~~~~p~~~~~~~~~~~ 673 (699)
T 4gl2_A 655 VHKGLDLPCLKIRNFVVVF 673 (699)
T ss_dssp CCC---CEEECGGGEEEEE
T ss_pred eEcccccceeEEEEEEEEc
Confidence 4322222334555666665
No 17
>1fv5_A First zinc finger of U-shaped; CCHC, protein interaction, transcription; NMR {Drosophila melanogaster} SCOP: g.37.1.2 PDB: 1y0j_B 2l6z_B
Probab=61.33 E-value=1.1 Score=24.25 Aligned_cols=23 Identities=26% Similarity=0.589 Sum_probs=18.8
Q ss_pred cCCCCeEEeccCCCCCCCCCCee
Q 039667 5 LIGPRRYSCYRCRNLVSCHEDIV 27 (107)
Q Consensus 5 l~g~~~y~C~~C~thLa~~~~li 27 (107)
|.|+++|.|..|..-.+..+.|.
T Consensus 3 ~~gekp~~C~~CgK~F~~~s~L~ 25 (36)
T 1fv5_A 3 LLKPARFMCLPCGIAFSSPSTLE 25 (36)
T ss_dssp SSSCCCCEETTTTEECSCHHHHH
T ss_pred CCCccCeECCCCCCccCCHhHcc
Confidence 57889999999998887766654
No 18
>1x6m_A GFA, glutathione-dependent formaldehyde-activating ENZ; Zn-enzyme, 3_10 helix, lyase; 2.35A {Paracoccus denitrificans} SCOP: b.88.1.4 PDB: 1xa8_A*
Probab=57.54 E-value=10 Score=27.32 Aligned_cols=35 Identities=17% Similarity=0.334 Sum_probs=21.3
Q ss_pred cccCCccceeeceecEEEeeeecccCCCceeeeEEe
Q 039667 47 IVEGPKEDQHLLTGLHTVADVYCADCGELLGWTYKR 82 (107)
Q Consensus 47 v~~g~~e~r~m~TG~h~V~DI~C~~C~~~lGWkY~~ 82 (107)
+..|+..-+...+|. .+.--||..|++.|-|..+.
T Consensus 80 ~~~G~~~l~~y~ss~-~~~r~FC~~CGs~l~~~~~~ 114 (196)
T 1x6m_A 80 VLEGAEKLEIVNAEA-PIQRHRCRDCGVHMYGRIEN 114 (196)
T ss_dssp EEECGGGEEESCTTS-SEEEEEETTTCCEEEEEECC
T ss_pred EecCCCceEEEeCCC-CeeeEECCCCCCcCCccccc
Confidence 334554333322332 35667999999999877643
No 19
>2ykg_A Probable ATP-dependent RNA helicase DDX58; hydrolase, innate immunity; 2.50A {Homo sapiens} PDB: 3tmi_A*
Probab=55.58 E-value=5.7 Score=32.43 Aligned_cols=86 Identities=20% Similarity=0.356 Sum_probs=50.8
Q ss_pred eEEeccCCCCCCCCCCe--eeeceeCCCceEEEeecccccccCCccceeeceecEEEeeeecc--cCCCceeeeEEeecc
Q 039667 10 RYSCYRCRNLVSCHEDI--VSKGFQASSGRAFLFSHAANIVEGPKEDQHLLTGLHTVADVYCA--DCGELLGWTYKRAFE 85 (107)
Q Consensus 10 ~y~C~~C~thLa~~~~l--iSk~f~G~~G~AyLf~~v~Nv~~g~~e~r~m~TG~h~V~DI~C~--~C~~~lGWkY~~A~e 85 (107)
...|.+|..+++..++| +..+.+=.-.+| |..-+.+..- +..+. .-.......|+|. .|+..+|-.+..---
T Consensus 578 ~~~c~~c~~~~~~~~~~~~~~~~~~v~~~~~--~~~~~~~~~~-~~~~~-~~~~~~~~~~~c~~~~c~~~~g~~~~~~~~ 653 (696)
T 2ykg_A 578 KLLCRKCKALACYTADVRVIEDCHYTVLGDA--FKECFVSRPH-PKPKQ-FSSFEKRAKIFCARQNCSHDWGIHVKYKTF 653 (696)
T ss_dssp EEEESSSCCEEEEGGGEEEETTTEEEECSTT--GGGTEEEEEE-EEEEE-CSSCEEEEEEEESSTTTCCEEEEEEEETTE
T ss_pred hhhccCCCceeeecchhhhhcCCCeeecCHH--hHhHeeeccC-Ccccc-ccccccCCceEeCCCCCCccccceEEEcce
Confidence 47899999999999885 333332222333 2111111111 11111 2334556788999 999999988754433
Q ss_pred cccccccccEEEEe
Q 039667 86 ESQKYKEGKIVLEK 99 (107)
Q Consensus 86 ~sqkYKEGkfIlE~ 99 (107)
+==.+|...|++|-
T Consensus 654 ~lp~~~~~~~~~~~ 667 (696)
T 2ykg_A 654 EIPVIKIESFVVED 667 (696)
T ss_dssp EEEEECGGGEEEEE
T ss_pred ecceeeeeeEEEEe
Confidence 33445688888874
No 20
>1srk_A Zinc finger protein ZFPM1; classical zinc finger, transcription; NMR {Mus musculus} SCOP: g.37.1.1
Probab=52.70 E-value=2.5 Score=20.54 Aligned_cols=21 Identities=19% Similarity=0.496 Sum_probs=15.6
Q ss_pred CCCCeEEeccCCCCCCCCCCe
Q 039667 6 IGPRRYSCYRCRNLVSCHEDI 26 (107)
Q Consensus 6 ~g~~~y~C~~C~thLa~~~~l 26 (107)
.|.+.|.|..|..-+...+.|
T Consensus 3 ~~~k~~~C~~C~k~f~~~~~l 23 (35)
T 1srk_A 3 SGKRPFVCRICLSAFTTKANC 23 (35)
T ss_dssp SCCSCEECSSSCCEESSHHHH
T ss_pred CCCcCeeCCCCCcccCCHHHH
Confidence 356789999998877665544
No 21
>2elm_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=52.43 E-value=2.4 Score=21.25 Aligned_cols=20 Identities=15% Similarity=0.268 Sum_probs=14.7
Q ss_pred CCCCeEEeccCCCCCCCCCC
Q 039667 6 IGPRRYSCYRCRNLVSCHED 25 (107)
Q Consensus 6 ~g~~~y~C~~C~thLa~~~~ 25 (107)
.|.++|.|..|..-.+..+.
T Consensus 5 ~~~k~~~C~~C~k~f~~~~~ 24 (37)
T 2elm_A 5 SSGHLYYCSQCHYSSITKNC 24 (37)
T ss_dssp SSSCEEECSSSSCEEECHHH
T ss_pred CCCcCeECCCCCcccCCHHH
Confidence 56789999999876655443
No 22
>2lvu_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}
Probab=56.84 E-value=3.1 Score=18.75 Aligned_cols=19 Identities=21% Similarity=0.557 Sum_probs=14.2
Q ss_pred CeEEeccCCCCCCCCCCee
Q 039667 9 RRYSCYRCRNLVSCHEDIV 27 (107)
Q Consensus 9 ~~y~C~~C~thLa~~~~li 27 (107)
++|.|..|+.-....+.|.
T Consensus 1 kp~~C~~C~k~f~~~~~l~ 19 (26)
T 2lvu_A 1 KPYVCERCGKRFVQSSQLA 19 (26)
Confidence 3688999988777766654
No 23
>2elx_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}
Probab=49.67 E-value=2.8 Score=20.20 Aligned_cols=21 Identities=19% Similarity=0.393 Sum_probs=15.3
Q ss_pred CCCCeEEeccCCCCCCCCCCe
Q 039667 6 IGPRRYSCYRCRNLVSCHEDI 26 (107)
Q Consensus 6 ~g~~~y~C~~C~thLa~~~~l 26 (107)
.|.+.|.|..|..-+...+.|
T Consensus 3 ~~~k~~~C~~C~k~f~~~~~L 23 (35)
T 2elx_A 3 SGSSGYVCALCLKKFVSSIRL 23 (35)
T ss_dssp CCCCSEECSSSCCEESSHHHH
T ss_pred CCCCCeECCCCcchhCCHHHH
Confidence 356789999998776665544
No 24
>2elp_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=48.87 E-value=4.3 Score=19.94 Aligned_cols=21 Identities=19% Similarity=0.327 Sum_probs=15.5
Q ss_pred CCCCeEEeccCCCCCCCC-CCe
Q 039667 6 IGPRRYSCYRCRNLVSCH-EDI 26 (107)
Q Consensus 6 ~g~~~y~C~~C~thLa~~-~~l 26 (107)
.+.++|.|..|..-+... +.|
T Consensus 5 ~~~k~~~C~~C~k~f~~~~~~L 26 (37)
T 2elp_A 5 SSGRAMKCPYCDFYFMKNGSDL 26 (37)
T ss_dssp CCCCCEECSSSSCEECSSCHHH
T ss_pred CCCCCeECCCCChhhccCHHHH
Confidence 456789999998777665 444
No 25
>2elq_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=47.98 E-value=3.2 Score=20.32 Aligned_cols=21 Identities=10% Similarity=0.420 Sum_probs=15.7
Q ss_pred CCCCeEEeccCCCCCCCCCCe
Q 039667 6 IGPRRYSCYRCRNLVSCHEDI 26 (107)
Q Consensus 6 ~g~~~y~C~~C~thLa~~~~l 26 (107)
.+.++|.|..|..-+...+.|
T Consensus 5 ~~~k~~~C~~C~k~f~~~~~l 25 (36)
T 2elq_A 5 SSGKPFKCSLCEYATRSKSNL 25 (36)
T ss_dssp CCCCSEECSSSSCEESCHHHH
T ss_pred CCCCCccCCCCCchhCCHHHH
Confidence 466789999998877665544
No 26
>2elo_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=47.65 E-value=2.5 Score=20.81 Aligned_cols=22 Identities=32% Similarity=0.368 Sum_probs=16.1
Q ss_pred cCCCCeEEeccCCCCCCCCCCe
Q 039667 5 LIGPRRYSCYRCRNLVSCHEDI 26 (107)
Q Consensus 5 l~g~~~y~C~~C~thLa~~~~l 26 (107)
-.|.+.|.|..|..-+...+.|
T Consensus 4 h~~~k~~~C~~C~k~f~~~~~l 25 (37)
T 2elo_A 4 GSSGRSYSCPVCEKSFSEDRLI 25 (37)
T ss_dssp CCCCCCCEETTTTEECSSHHHH
T ss_pred CCCCCCcCCCCCCCccCCHHHH
Confidence 3567889999998777665544
No 27
>2elv_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=46.88 E-value=3.4 Score=20.22 Aligned_cols=21 Identities=19% Similarity=0.259 Sum_probs=14.7
Q ss_pred CCCCeEEeccCCCCCCCCCCe
Q 039667 6 IGPRRYSCYRCRNLVSCHEDI 26 (107)
Q Consensus 6 ~g~~~y~C~~C~thLa~~~~l 26 (107)
.+.++|.|..|..-+...+.|
T Consensus 5 ~~~k~~~C~~C~k~f~~~~~l 25 (36)
T 2elv_A 5 SSGLLYDCHICERKFKNELDR 25 (36)
T ss_dssp CCCCCEECSSSCCEESSHHHH
T ss_pred CCCCCeECCCCCCccCCHHHH
Confidence 456789999998766554443
No 28
>2m0e_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}
Probab=46.02 E-value=4.5 Score=18.14 Aligned_cols=19 Identities=11% Similarity=0.335 Sum_probs=13.9
Q ss_pred CeEEeccCCCCCCCCCCee
Q 039667 9 RRYSCYRCRNLVSCHEDIV 27 (107)
Q Consensus 9 ~~y~C~~C~thLa~~~~li 27 (107)
++|.|..|...+...+.|.
T Consensus 1 k~~~C~~C~~~f~~~~~l~ 19 (29)
T 2m0e_A 1 KEHKCPHCDKKFNQVGNLK 19 (29)
T ss_dssp CCCCCSSCCCCCCTTTHHH
T ss_pred CCCcCCCCCcccCCHHHHH
Confidence 3688999988777766553
No 29
>2elt_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=44.47 E-value=3.8 Score=19.88 Aligned_cols=21 Identities=14% Similarity=0.476 Sum_probs=14.9
Q ss_pred CCCCeEEeccCCCCCCCCCCe
Q 039667 6 IGPRRYSCYRCRNLVSCHEDI 26 (107)
Q Consensus 6 ~g~~~y~C~~C~thLa~~~~l 26 (107)
.+.++|.|..|..-+...+.|
T Consensus 5 ~~~k~~~C~~C~k~f~~~~~l 25 (36)
T 2elt_A 5 SSGKPYKCPQCSYASAIKANL 25 (36)
T ss_dssp CCCCSEECSSSSCEESSHHHH
T ss_pred CCCCCCCCCCCCcccCCHHHH
Confidence 456789999998766654443
No 30
>1p7a_A BF3, BKLF, kruppel-like factor 3; classical zinc finger, transcription factor, DNA binding protein; NMR {Mus musculus} SCOP: g.37.1.1 PDB: 1u85_A 1u86_A
Probab=44.35 E-value=2.9 Score=20.54 Aligned_cols=21 Identities=19% Similarity=0.537 Sum_probs=15.5
Q ss_pred CCCCeEEeccCCCCCCCCCCe
Q 039667 6 IGPRRYSCYRCRNLVSCHEDI 26 (107)
Q Consensus 6 ~g~~~y~C~~C~thLa~~~~l 26 (107)
.|.++|.|..|..-....+.|
T Consensus 7 ~~~k~~~C~~C~k~f~~~~~l 27 (37)
T 1p7a_A 7 TGIKPFQCPDCDRSFSRSDHL 27 (37)
T ss_dssp CCSSSBCCTTTCCCBSSHHHH
T ss_pred CCCCCccCCCCCcccCcHHHH
Confidence 466789999998877655443
No 31
>2kvh_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}
Probab=44.04 E-value=3.4 Score=18.80 Aligned_cols=18 Identities=17% Similarity=0.436 Sum_probs=12.8
Q ss_pred CeEEeccCCCCCCCCCCe
Q 039667 9 RRYSCYRCRNLVSCHEDI 26 (107)
Q Consensus 9 ~~y~C~~C~thLa~~~~l 26 (107)
++|.|..|..-+...+.|
T Consensus 2 k~~~C~~C~k~f~~~~~l 19 (27)
T 2kvh_A 2 KPFSCSLCPQRSRDFSAM 19 (27)
T ss_dssp CCEECSSSSCEESSHHHH
T ss_pred cCccCCCcChhhCCHHHH
Confidence 579999998776654443
No 32
>2epc_A Zinc finger protein 32; zinc finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yta_A
Probab=43.78 E-value=3.8 Score=20.67 Aligned_cols=22 Identities=18% Similarity=0.407 Sum_probs=16.2
Q ss_pred CCCCeEEeccCCCCCCCCCCee
Q 039667 6 IGPRRYSCYRCRNLVSCHEDIV 27 (107)
Q Consensus 6 ~g~~~y~C~~C~thLa~~~~li 27 (107)
.+.+.|.|..|..-+...+.|.
T Consensus 7 ~~~~~~~C~~C~k~f~~~~~l~ 28 (42)
T 2epc_A 7 GGETPYLCGQCGKSFTQRGSLA 28 (42)
T ss_dssp CSSCCEECSSSCCEESSHHHHH
T ss_pred CCCCCeECCCCCcccCCHHHHH
Confidence 4667899999988776655543
No 33
>1rik_A E6APC1 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1 PDB: 1sp1_A 1va3_A
Probab=43.12 E-value=4.8 Score=18.25 Aligned_cols=18 Identities=11% Similarity=0.506 Sum_probs=12.9
Q ss_pred CeEEeccCCCCCCCCCCe
Q 039667 9 RRYSCYRCRNLVSCHEDI 26 (107)
Q Consensus 9 ~~y~C~~C~thLa~~~~l 26 (107)
++|.|..|.......+.|
T Consensus 1 k~~~C~~C~k~f~~~~~l 18 (29)
T 1rik_A 1 YKFACPECPKRFMRSDHL 18 (29)
T ss_dssp CCEECSSSSCEESCSHHH
T ss_pred CCccCCCCCchhCCHHHH
Confidence 368999998776665554
No 34
>2els_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=42.87 E-value=4.2 Score=19.82 Aligned_cols=21 Identities=10% Similarity=0.461 Sum_probs=15.1
Q ss_pred CCCCeEEeccCCCCCCCCCCe
Q 039667 6 IGPRRYSCYRCRNLVSCHEDI 26 (107)
Q Consensus 6 ~g~~~y~C~~C~thLa~~~~l 26 (107)
.+.++|.|..|..-+...+.|
T Consensus 5 ~~~k~~~C~~C~k~f~~~~~l 25 (36)
T 2els_A 5 SSGKIFTCEYCNKVFKFKHSL 25 (36)
T ss_dssp SCCCCEECTTTCCEESSHHHH
T ss_pred CCCCCEECCCCCceeCCHHHH
Confidence 356789999998876655443
No 35
>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1
Probab=42.59 E-value=3.3 Score=23.15 Aligned_cols=26 Identities=15% Similarity=0.340 Sum_probs=17.8
Q ss_pred ceecCCCCeEEeccCCCCCCCCCCee
Q 039667 2 ADNLIGPRRYSCYRCRNLVSCHEDIV 27 (107)
Q Consensus 2 ~~~l~g~~~y~C~~C~thLa~~~~li 27 (107)
|.--.|.++|.|..|...+...+.|.
T Consensus 2 ~~~h~~~k~~~C~~C~k~f~~~~~l~ 27 (66)
T 2drp_A 2 EFTKEGEHTYRCKVCSRVYTHISNFC 27 (66)
T ss_dssp -CEEEETTEEECTTTCCEESSHHHHH
T ss_pred ccccCCCcceECCCCcchhCCHHHHH
Confidence 34446778999999987776655543
No 36
>1njq_A Superman protein; zinc-finger, peptide-zinc complex, beta-BETA-ALFA motif, metal binding protein; NMR {Synthetic} SCOP: g.37.1.3 PDB: 2l1o_A
Probab=42.47 E-value=4 Score=20.43 Aligned_cols=21 Identities=24% Similarity=0.604 Sum_probs=15.5
Q ss_pred CCCeEEeccCCCCCCCCCCee
Q 039667 7 GPRRYSCYRCRNLVSCHEDIV 27 (107)
Q Consensus 7 g~~~y~C~~C~thLa~~~~li 27 (107)
+.+.|.|..|..-+...+.|.
T Consensus 3 ~~k~~~C~~C~k~f~~~~~L~ 23 (39)
T 1njq_A 3 PPRSYTCSFCKREFRSAQALG 23 (39)
T ss_dssp CSSSEECTTTCCEESSHHHHH
T ss_pred CCCceECCCCCcccCCHHHHH
Confidence 567899999987776655543
No 37
>2lvr_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, classical zinc finger, transcription; NMR {Homo sapiens}
Probab=47.82 E-value=5.5 Score=18.14 Aligned_cols=19 Identities=16% Similarity=0.506 Sum_probs=14.1
Q ss_pred CeEEeccCCCCCCCCCCee
Q 039667 9 RRYSCYRCRNLVSCHEDIV 27 (107)
Q Consensus 9 ~~y~C~~C~thLa~~~~li 27 (107)
++|.|..|...+...+.|.
T Consensus 2 k~~~C~~C~k~f~~~~~l~ 20 (30)
T 2lvr_A 2 KPYVCIHCQRQFADPGALQ 20 (30)
Confidence 4689999988777666554
No 38
>2en2_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=40.85 E-value=4.3 Score=20.55 Aligned_cols=21 Identities=19% Similarity=0.411 Sum_probs=15.8
Q ss_pred CCCCeEEeccCCCCCCCCCCe
Q 039667 6 IGPRRYSCYRCRNLVSCHEDI 26 (107)
Q Consensus 6 ~g~~~y~C~~C~thLa~~~~l 26 (107)
.|.++|.|..|..-+...+.|
T Consensus 7 ~~~k~~~C~~C~k~f~~~~~L 27 (42)
T 2en2_A 7 GGEKPYKCETCGARFVQVAHL 27 (42)
T ss_dssp CSSCSEECTTTCCEESSHHHH
T ss_pred CCCCCEeCCCcChhhCCHHHH
Confidence 467889999998776665554
No 39
>1nyp_A Pinch protein; LIM domain, protein recognition, cell adhesion; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3 PDB: 1u5s_B
Probab=40.74 E-value=8 Score=22.33 Aligned_cols=11 Identities=18% Similarity=0.742 Sum_probs=7.6
Q ss_pred EEeccCCCCCC
Q 039667 11 YSCYRCRNLVS 21 (107)
Q Consensus 11 y~C~~C~thLa 21 (107)
|.|..|+.+|.
T Consensus 32 F~C~~C~~~L~ 42 (66)
T 1nyp_A 32 FVCAKCEKPFL 42 (66)
T ss_dssp CBCTTTCCBCS
T ss_pred CEECCCCCCCC
Confidence 66777777765
No 40
>2lvt_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}
Probab=46.31 E-value=6 Score=18.05 Aligned_cols=19 Identities=11% Similarity=0.445 Sum_probs=13.7
Q ss_pred CeEEeccCCCCCCCCCCee
Q 039667 9 RRYSCYRCRNLVSCHEDIV 27 (107)
Q Consensus 9 ~~y~C~~C~thLa~~~~li 27 (107)
++|.|..|..-....+.|.
T Consensus 1 k~~~C~~C~k~f~~~~~l~ 19 (29)
T 2lvt_A 1 KPCQCVMCGKAFTQASSLI 19 (29)
Confidence 3688999987777666654
No 41
>2yu5_A Zinc finger protein 473; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=40.12 E-value=7.5 Score=19.84 Aligned_cols=22 Identities=18% Similarity=0.600 Sum_probs=16.8
Q ss_pred CCCCeEEeccCCCCCCCCCCee
Q 039667 6 IGPRRYSCYRCRNLVSCHEDIV 27 (107)
Q Consensus 6 ~g~~~y~C~~C~thLa~~~~li 27 (107)
.+.+.|.|..|..-+...+.|.
T Consensus 8 ~~~k~~~C~~C~k~f~~~~~L~ 29 (44)
T 2yu5_A 8 AGENPFKCSKCDRVFTQRNYLV 29 (44)
T ss_dssp SCCCSEECSSSSCEESSSHHHH
T ss_pred CCCCCeECCCCCchhCCHHHHH
Confidence 4678899999988777666554
No 42
>2elr_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=39.68 E-value=3.9 Score=19.81 Aligned_cols=21 Identities=10% Similarity=0.229 Sum_probs=15.8
Q ss_pred CCCCeEEeccCCCCCCCCCCe
Q 039667 6 IGPRRYSCYRCRNLVSCHEDI 26 (107)
Q Consensus 6 ~g~~~y~C~~C~thLa~~~~l 26 (107)
.+.+.|.|..|..-+...+.|
T Consensus 5 ~~~~~~~C~~C~k~f~~~~~l 25 (36)
T 2elr_A 5 SSGKTHLCDMCGKKFKSKGTL 25 (36)
T ss_dssp CCCSSCBCTTTCCBCSSHHHH
T ss_pred CCCCCeecCcCCCCcCchHHH
Confidence 456789999999877765554
No 43
>1iz6_A Initiation factor 5A; SH3-like barrel, OB fold, biosynthetic protein; 2.00A {Pyrococcus horikoshii} SCOP: b.34.5.2 b.40.4.5
Probab=39.34 E-value=18 Score=25.08 Aligned_cols=32 Identities=19% Similarity=0.063 Sum_probs=27.1
Q ss_pred ceeCCCceEEEeecccccccCCccceeeceec
Q 039667 30 GFQASSGRAFLFSHAANIVEGPKEDQHLLTGL 61 (107)
Q Consensus 30 ~f~G~~G~AyLf~~v~Nv~~g~~e~r~m~TG~ 61 (107)
.=.|+||.|+.=-++.|+..|...++..-+|-
T Consensus 33 ~KpGKhG~A~vr~k~knl~tG~~~e~tf~s~~ 64 (138)
T 1iz6_A 33 SSPGKHGSAKARIEAVGIFDGKVRSIVKPTSA 64 (138)
T ss_dssp CCCCTTSCCEEEEEEEETTTCCEEEEEEETTS
T ss_pred ecCCCCCceEEEEEEEECCCCCEEEEEecCCC
Confidence 34699999998899999999999887777764
No 44
>2kvf_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}
Probab=39.10 E-value=4.4 Score=18.40 Aligned_cols=18 Identities=33% Similarity=0.661 Sum_probs=12.9
Q ss_pred CeEEeccCCCCCCCCCCe
Q 039667 9 RRYSCYRCRNLVSCHEDI 26 (107)
Q Consensus 9 ~~y~C~~C~thLa~~~~l 26 (107)
++|.|..|...+...+.|
T Consensus 2 k~~~C~~C~k~f~~~~~l 19 (28)
T 2kvf_A 2 RPYSCSVCGKRFSLKHQM 19 (28)
T ss_dssp CSEECSSSCCEESCHHHH
T ss_pred cCccCCCCCcccCCHHHH
Confidence 579999998776655443
No 45
>2iyb_E Testin, TESS, TES; LIM domain, SH3-binding, tumour supressor LIM domain EVH1 DO cell motility, phosphorylation, cytoskeleton; 2.35A {Homo sapiens}
Probab=38.47 E-value=7.9 Score=22.53 Aligned_cols=13 Identities=15% Similarity=0.493 Sum_probs=8.9
Q ss_pred CeEEeccCCCCCC
Q 039667 9 RRYSCYRCRNLVS 21 (107)
Q Consensus 9 ~~y~C~~C~thLa 21 (107)
.-|.|..|+.+|.
T Consensus 31 ~CF~C~~C~~~L~ 43 (65)
T 2iyb_E 31 ECFLCSCCSKCLI 43 (65)
T ss_dssp TTSBCTTTCCBCT
T ss_pred CCEECCCCCCcCC
Confidence 3467777777775
No 46
>3fac_A Putative uncharacterized protein; complete proteome, structural genomics, PSI-2, protein structure initiative; 2.50A {Rhodobacter sphaeroides 2}
Probab=37.32 E-value=18 Score=23.61 Aligned_cols=18 Identities=22% Similarity=0.484 Sum_probs=14.4
Q ss_pred EEeeeecccCCCceeeeE
Q 039667 63 TVADVYCADCGELLGWTY 80 (107)
Q Consensus 63 ~V~DI~C~~C~~~lGWkY 80 (107)
.+.--||..|++.|-|..
T Consensus 64 ~~~r~FC~~CGs~l~~~~ 81 (118)
T 3fac_A 64 TAKHWFCRTCGIYTHHQR 81 (118)
T ss_dssp CSEEEEETTTCCEEEEEC
T ss_pred CEeeEECCCCCccccCcc
Confidence 356679999999998764
No 47
>2m0d_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}
Probab=37.23 E-value=5 Score=18.13 Aligned_cols=18 Identities=22% Similarity=0.403 Sum_probs=12.8
Q ss_pred CeEEeccCCCCCCCCCCe
Q 039667 9 RRYSCYRCRNLVSCHEDI 26 (107)
Q Consensus 9 ~~y~C~~C~thLa~~~~l 26 (107)
++|.|..|..-+...+.|
T Consensus 2 k~~~C~~C~~~f~~~~~l 19 (30)
T 2m0d_A 2 KPYQCDYCGRSFSDPTSK 19 (30)
T ss_dssp CCEECTTTCCEESCHHHH
T ss_pred cCccCCCCCcccCCHHHH
Confidence 579999998766655443
No 48
>2eoy_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=36.91 E-value=8.9 Score=19.80 Aligned_cols=22 Identities=18% Similarity=0.625 Sum_probs=16.2
Q ss_pred CCCCeEEeccCCCCCCCCCCee
Q 039667 6 IGPRRYSCYRCRNLVSCHEDIV 27 (107)
Q Consensus 6 ~g~~~y~C~~C~thLa~~~~li 27 (107)
.+.++|.|..|..-++..+.|.
T Consensus 8 ~~~k~~~C~~C~k~f~~~~~L~ 29 (46)
T 2eoy_A 8 QKEKCFKCNKCEKTFSCSKYLT 29 (46)
T ss_dssp CCSCCEECSSSCCEESSSHHHH
T ss_pred CCCCCEECcCCCCcCCCHHHHH
Confidence 4667899999987766655543
No 49
>2ely_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ena_A 2en4_A
Probab=36.86 E-value=10 Score=19.52 Aligned_cols=22 Identities=18% Similarity=0.477 Sum_probs=17.6
Q ss_pred CCCCeEEeccCCCCCCCCCCee
Q 039667 6 IGPRRYSCYRCRNLVSCHEDIV 27 (107)
Q Consensus 6 ~g~~~y~C~~C~thLa~~~~li 27 (107)
.+.+.|.|..|..-+...+.|.
T Consensus 8 ~~~k~~~C~~C~k~f~~~~~L~ 29 (46)
T 2ely_A 8 TGEKPFKCVECGKGFSRRSALN 29 (46)
T ss_dssp CCCCSBCCSSSCCCBSSTTHHH
T ss_pred CCCCCcccCccCcccCCHHHHH
Confidence 5678899999998888777664
No 50
>1ogy_B Diheme cytochrome C NAPB molecule: nitrate reductase; oxidoreductase; HET: MGD HEC; 3.2A {Rhodobacter sphaeroides} SCOP: a.138.1.3
Probab=36.84 E-value=13 Score=26.26 Aligned_cols=29 Identities=28% Similarity=0.556 Sum_probs=25.4
Q ss_pred CCeEEeccCCCCCCCCCCeeeeceeCCCc
Q 039667 8 PRRYSCYRCRNLVSCHEDIVSKGFQASSG 36 (107)
Q Consensus 8 ~~~y~C~~C~thLa~~~~liSk~f~G~~G 36 (107)
++.|-|..|+++=+...-|+.-.|....+
T Consensus 93 p~RYfCtQCHVpQada~PlV~N~F~~~~~ 121 (130)
T 1ogy_B 93 PRRYFCTACHVPQTNAQPLVTNEFRDMLT 121 (130)
T ss_dssp STTCCGGGTCCBCBCCCCSSCBCCBCSSS
T ss_pred ccceecccccCccccCccccccccccchh
Confidence 67899999999999999999999986654
No 51
>1x61_A Thyroid receptor interacting protein 6; LIM domain, OPA-interacting protein 1, zyxin related protein 1 (ZRP-1), structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=36.69 E-value=12 Score=21.83 Aligned_cols=11 Identities=27% Similarity=0.890 Sum_probs=6.7
Q ss_pred EEeccCCCCCC
Q 039667 11 YSCYRCRNLVS 21 (107)
Q Consensus 11 y~C~~C~thLa 21 (107)
|.|..|+.+|.
T Consensus 34 F~C~~C~~~L~ 44 (72)
T 1x61_A 34 FVCSTCRAQLR 44 (72)
T ss_dssp CBCSSSCCBCT
T ss_pred CcccccCCcCC
Confidence 56666666663
No 52
>2yu8_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=36.61 E-value=9.1 Score=19.69 Aligned_cols=22 Identities=18% Similarity=0.647 Sum_probs=16.8
Q ss_pred CCCCeEEeccCCCCCCCCCCee
Q 039667 6 IGPRRYSCYRCRNLVSCHEDIV 27 (107)
Q Consensus 6 ~g~~~y~C~~C~thLa~~~~li 27 (107)
.|.+.|.|..|..-++..+.|.
T Consensus 8 ~~~k~~~C~~C~k~f~~~~~L~ 29 (46)
T 2yu8_A 8 TGEKPYKCNECGKVFTQNSHLA 29 (46)
T ss_dssp CCCSSEECSSSCCEESSSHHHH
T ss_pred CCCCCeECCcCCchhCCHHHHH
Confidence 5678899999988777766554
No 53
>2eif_A IF-5A, protein (eukaryotic translation initiation factor; EIF-5A, OB-fold, structural genomics, BSGC STRU funded by NIH; 1.80A {Methanocaldococcus jannaschii} SCOP: b.34.5.2 b.40.4.5 PDB: 1eif_A
Probab=36.55 E-value=21 Score=24.54 Aligned_cols=30 Identities=20% Similarity=0.027 Sum_probs=25.7
Q ss_pred eCCCceEEEeecccccccCCccceeeceec
Q 039667 32 QASSGRAFLFSHAANIVEGPKEDQHLLTGL 61 (107)
Q Consensus 32 ~G~~G~AyLf~~v~Nv~~g~~e~r~m~TG~ 61 (107)
.|++|.|+.=-++.|+..|...++...+|-
T Consensus 39 pGKhG~A~vr~k~knl~tG~~~e~tf~s~~ 68 (136)
T 2eif_A 39 PGKHGGAKARVVGIGIFEKVKKEFVAPTSS 68 (136)
T ss_dssp CCSSSCCEEEEEEEESSSCCEEEEEEETTS
T ss_pred CCCCCceEEEEEEEEcCCCCeEEEEecCCC
Confidence 599999998889999999998887766664
No 54
>4a2w_A RIG-I, retinoic acid inducible protein I; hydrolase, superfamily 2 RNA helicase, ATP and dsRNA binding antiviral signalling pathway; 3.70A {Anas platyrhynchos}
Probab=35.67 E-value=7.8 Score=33.90 Aligned_cols=67 Identities=21% Similarity=0.429 Sum_probs=0.0
Q ss_pred eEEeccCCCCCCCCCCee--eeceeCCCceEEEeecccccccCCccceeeceecEEEeeeecc--cCCCceeeeE
Q 039667 10 RYSCYRCRNLVSCHEDIV--SKGFQASSGRAFLFSHAANIVEGPKEDQHLLTGLHTVADVYCA--DCGELLGWTY 80 (107)
Q Consensus 10 ~y~C~~C~thLa~~~~li--Sk~f~G~~G~AyLf~~v~Nv~~g~~e~r~m~TG~h~V~DI~C~--~C~~~lGWkY 80 (107)
.+.|.+|...++..+||- .++-+=.-+++|- ..+++..-+. .+. .-..+....|+|. +|+..+|-..
T Consensus 812 ~~~c~~c~~~~~~~~d~~~~~~~~~~~~~~~f~--~~~~~~~~~~-~~~-~~~~~~~~~~~c~~~~c~~~~g~~~ 882 (936)
T 4a2w_A 812 NLLCGKCKAYACSTDDIRIIKDSHHIVLGEAFK--ERYTTKPHKK-PMQ-FDGFEKKSKMYCRNNNCQHDWGITV 882 (936)
T ss_dssp ---------------------------------------------------------------------------
T ss_pred EEEcCCCCceeechhhheeecCCCeEecChhhh--hheeccCCCC-cch-hhcccCCceEEeCccccChHhhhhe
Confidence 489999999999999973 2222222234432 2222222222 121 3445667889999 9999999765
No 55
>2eos_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=35.43 E-value=5 Score=20.32 Aligned_cols=22 Identities=18% Similarity=0.400 Sum_probs=16.3
Q ss_pred CCCCeEEeccCCCCCCCCCCee
Q 039667 6 IGPRRYSCYRCRNLVSCHEDIV 27 (107)
Q Consensus 6 ~g~~~y~C~~C~thLa~~~~li 27 (107)
.+.++|.|..|..-+...+.|.
T Consensus 7 ~~~k~~~C~~C~k~f~~~~~L~ 28 (42)
T 2eos_A 7 GGEKPYPCEICGTRFRHLQTLK 28 (42)
T ss_dssp SSSCCBCCSSSCCCBSSHHHHH
T ss_pred CCCCCEECCCCCCccCCHHHHH
Confidence 4667899999988777655543
No 56
>1klr_A Zinc finger Y-chromosomal protein; transcription; NMR {Synthetic} SCOP: g.37.1.1 PDB: 5znf_A 1kls_A 1xrz_A* 7znf_A
Probab=35.38 E-value=5.8 Score=17.87 Aligned_cols=18 Identities=17% Similarity=0.419 Sum_probs=13.3
Q ss_pred eEEeccCCCCCCCCCCee
Q 039667 10 RYSCYRCRNLVSCHEDIV 27 (107)
Q Consensus 10 ~y~C~~C~thLa~~~~li 27 (107)
.|.|..|..-+...+.|.
T Consensus 2 ~~~C~~C~k~f~~~~~l~ 19 (30)
T 1klr_A 2 TYQCQYCEFRSADSSNLK 19 (30)
T ss_dssp CCCCSSSSCCCSCSHHHH
T ss_pred CccCCCCCCccCCHHHHH
Confidence 578999988877766553
No 57
>2epw_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=34.92 E-value=9.9 Score=19.46 Aligned_cols=22 Identities=14% Similarity=0.513 Sum_probs=16.7
Q ss_pred CCCCeEEeccCCCCCCCCCCee
Q 039667 6 IGPRRYSCYRCRNLVSCHEDIV 27 (107)
Q Consensus 6 ~g~~~y~C~~C~thLa~~~~li 27 (107)
.|.+.|.|..|..-++..+.|.
T Consensus 8 ~~~k~~~C~~C~k~F~~~~~L~ 29 (46)
T 2epw_A 8 TGEKPCKCTECGKAFCWKSQLI 29 (46)
T ss_dssp CCCCSEECSSSCCEESSSHHHH
T ss_pred CCCCCeeCCCCCCccCCHHHHH
Confidence 4677899999988777666554
No 58
>3iuf_A Zinc finger protein UBI-D4; structural genomics consortium (SGC), C2H2, APO metal-binding, nucleus, phosphoprotein, transcription, TRAN regulation; 1.80A {Homo sapiens}
Probab=34.92 E-value=6.6 Score=21.02 Aligned_cols=22 Identities=14% Similarity=0.302 Sum_probs=16.2
Q ss_pred CCCCeEEeccCCCCCCCCCCee
Q 039667 6 IGPRRYSCYRCRNLVSCHEDIV 27 (107)
Q Consensus 6 ~g~~~y~C~~C~thLa~~~~li 27 (107)
.|.+.|.|..|..-+...+.|.
T Consensus 3 t~~kp~~C~~C~k~F~~~~~L~ 24 (48)
T 3iuf_A 3 DRDKPYACDICGKRYKNRPGLS 24 (48)
T ss_dssp TTTSCEECTTTCCEESSHHHHH
T ss_pred CCCcCEECCCcCcccCCHHHHH
Confidence 4678899999987776655553
No 59
>2emb_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=34.47 E-value=7.3 Score=19.88 Aligned_cols=21 Identities=19% Similarity=0.626 Sum_probs=15.7
Q ss_pred CCCCeEEeccCCCCCCCCCCe
Q 039667 6 IGPRRYSCYRCRNLVSCHEDI 26 (107)
Q Consensus 6 ~g~~~y~C~~C~thLa~~~~l 26 (107)
.+.+.|.|..|..-+...+.|
T Consensus 8 ~~~k~~~C~~C~k~f~~~~~L 28 (44)
T 2emb_A 8 HTRKRYECSKCQATFNLRKHL 28 (44)
T ss_dssp CCCSSEECTTTCCEESCHHHH
T ss_pred CCCCCeECCCCCCccCCHHHH
Confidence 566789999998776665544
No 60
>2eoo_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=34.24 E-value=7.8 Score=20.04 Aligned_cols=22 Identities=27% Similarity=0.696 Sum_probs=16.4
Q ss_pred CCCCeEEeccCCCCCCCCCCee
Q 039667 6 IGPRRYSCYRCRNLVSCHEDIV 27 (107)
Q Consensus 6 ~g~~~y~C~~C~thLa~~~~li 27 (107)
.|.+.|.|..|..-+...+.|.
T Consensus 8 ~~~k~~~C~~C~k~F~~~~~L~ 29 (46)
T 2eoo_A 8 SGERPYGCNECGKNFGRHSHLI 29 (46)
T ss_dssp SCCCCEECSSSCCEESSHHHHH
T ss_pred CCCCCEEccccCcccCCHHHHH
Confidence 5678899999987776665543
No 61
>2ept_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=34.08 E-value=8 Score=19.39 Aligned_cols=21 Identities=24% Similarity=0.561 Sum_probs=15.7
Q ss_pred CCCCeEEeccCCCCCCCCCCe
Q 039667 6 IGPRRYSCYRCRNLVSCHEDI 26 (107)
Q Consensus 6 ~g~~~y~C~~C~thLa~~~~l 26 (107)
.|.+.|.|..|..-+...+.|
T Consensus 6 ~~~k~~~C~~C~k~f~~~~~L 26 (41)
T 2ept_A 6 SGQRVYECQECGKSFRQKGSL 26 (41)
T ss_dssp CCCCCEECSSSCCEESSHHHH
T ss_pred CCCCCeECCCCCCCcCCHHHH
Confidence 567889999998776665554
No 62
>1paa_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1
Probab=33.76 E-value=5.4 Score=18.22 Aligned_cols=17 Identities=18% Similarity=0.510 Sum_probs=12.1
Q ss_pred eEEeccCCCCCCCCCCe
Q 039667 10 RYSCYRCRNLVSCHEDI 26 (107)
Q Consensus 10 ~y~C~~C~thLa~~~~l 26 (107)
+|.|..|.......+.|
T Consensus 2 ~~~C~~C~k~f~~~~~l 18 (30)
T 1paa_A 2 AYACGLCNRAFTRRDLL 18 (30)
T ss_dssp CSBCTTTCCBCSSSHHH
T ss_pred CcCCcccCcccCChHHH
Confidence 57898898776665544
No 63
>2kvg_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}
Probab=33.64 E-value=4.6 Score=18.53 Aligned_cols=17 Identities=24% Similarity=0.450 Sum_probs=11.7
Q ss_pred CeEEeccCCCCCCCCCC
Q 039667 9 RRYSCYRCRNLVSCHED 25 (107)
Q Consensus 9 ~~y~C~~C~thLa~~~~ 25 (107)
++|.|..|..-....+.
T Consensus 2 k~~~C~~C~k~f~~~~~ 18 (27)
T 2kvg_A 2 APYRCPLCRAGCPSLAS 18 (27)
T ss_dssp CTEEETTTTEEESCHHH
T ss_pred cCcCCCCCCcccCCHHH
Confidence 56999999866555443
No 64
>2yte_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=33.55 E-value=5.6 Score=19.98 Aligned_cols=22 Identities=32% Similarity=0.708 Sum_probs=16.4
Q ss_pred CCCCeEEeccCCCCCCCCCCee
Q 039667 6 IGPRRYSCYRCRNLVSCHEDIV 27 (107)
Q Consensus 6 ~g~~~y~C~~C~thLa~~~~li 27 (107)
.|.+.|.|..|..-+...+.|.
T Consensus 6 ~~~k~~~C~~C~k~f~~~~~L~ 27 (42)
T 2yte_A 6 SGEKPYSCAECKETFSDNNRLV 27 (42)
T ss_dssp CSCCSCBCTTTCCBCSSHHHHH
T ss_pred CCCCCeECCCCCCccCCHHHHH
Confidence 4667899999988777665543
No 65
>2el5_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eol_A 2emv_A 2eqw_A 2en0_A 2epy_A
Probab=33.55 E-value=7.2 Score=19.62 Aligned_cols=22 Identities=18% Similarity=0.617 Sum_probs=16.4
Q ss_pred CCCCeEEeccCCCCCCCCCCee
Q 039667 6 IGPRRYSCYRCRNLVSCHEDIV 27 (107)
Q Consensus 6 ~g~~~y~C~~C~thLa~~~~li 27 (107)
.|.+.|.|..|..-+...+.|.
T Consensus 6 ~~~k~~~C~~C~k~f~~~~~L~ 27 (42)
T 2el5_A 6 SGENPYECSECGKAFNRKDQLI 27 (42)
T ss_dssp SSCCSEECSSSCCEESSHHHHH
T ss_pred CCCCCccCCCcChhhCCHHHHH
Confidence 5678899999988776655543
No 66
>2en3_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=33.33 E-value=11 Score=19.35 Aligned_cols=22 Identities=18% Similarity=0.443 Sum_probs=17.0
Q ss_pred CCCCeEEeccCCCCCCCCCCee
Q 039667 6 IGPRRYSCYRCRNLVSCHEDIV 27 (107)
Q Consensus 6 ~g~~~y~C~~C~thLa~~~~li 27 (107)
.+.+.|.|..|..-+...+.|.
T Consensus 8 ~~~k~~~C~~C~k~F~~~~~L~ 29 (46)
T 2en3_A 8 TGEKPFQCKECGMNFSWSCSLF 29 (46)
T ss_dssp CCCCSEECSSSCCEESSSHHHH
T ss_pred CCCCCeeCcccChhhCCHHHHH
Confidence 4667899999988877766654
No 67
>2eox_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=33.21 E-value=9.6 Score=19.39 Aligned_cols=22 Identities=14% Similarity=0.428 Sum_probs=16.0
Q ss_pred CCCCeEEeccCCCCCCCCCCee
Q 039667 6 IGPRRYSCYRCRNLVSCHEDIV 27 (107)
Q Consensus 6 ~g~~~y~C~~C~thLa~~~~li 27 (107)
.+.++|.|..|..-+...+.|.
T Consensus 8 ~~~~~~~C~~C~k~F~~~~~L~ 29 (44)
T 2eox_A 8 TDSKSYNCNECGKAFTRIFHLT 29 (44)
T ss_dssp CCCCCEEETTTTEEESSSHHHH
T ss_pred CCCCCeECcccCcccCCHHHHH
Confidence 4667899999987666655543
No 68
>2yts_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=32.98 E-value=7.7 Score=19.91 Aligned_cols=22 Identities=18% Similarity=0.466 Sum_probs=16.3
Q ss_pred CCCCeEEeccCCCCCCCCCCee
Q 039667 6 IGPRRYSCYRCRNLVSCHEDIV 27 (107)
Q Consensus 6 ~g~~~y~C~~C~thLa~~~~li 27 (107)
.+.+.|.|..|..-+...+.|.
T Consensus 8 ~~~k~~~C~~C~k~f~~~~~L~ 29 (46)
T 2yts_A 8 TGEKPYICNECGKSFIQKSHLN 29 (46)
T ss_dssp CSCCSEECSSSCCEESSHHHHH
T ss_pred CCCcCEECCCCChhhCChHHHH
Confidence 4677899999987776655543
No 69
>2m0f_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}
Probab=32.98 E-value=6 Score=17.76 Aligned_cols=18 Identities=11% Similarity=0.429 Sum_probs=12.1
Q ss_pred CeEEeccCCCCCCCCCCe
Q 039667 9 RRYSCYRCRNLVSCHEDI 26 (107)
Q Consensus 9 ~~y~C~~C~thLa~~~~l 26 (107)
+.|.|..|..-+.....|
T Consensus 1 ~~~~C~~C~k~f~~~~~l 18 (29)
T 2m0f_A 1 GPLKCRECGKQFTTSGNL 18 (29)
T ss_dssp CCEECTTTSCEESCHHHH
T ss_pred CCccCCCCCCccCChhHH
Confidence 368899998766554443
No 70
>2epv_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=32.59 E-value=8.1 Score=19.82 Aligned_cols=22 Identities=18% Similarity=0.526 Sum_probs=16.2
Q ss_pred CCCCeEEeccCCCCCCCCCCee
Q 039667 6 IGPRRYSCYRCRNLVSCHEDIV 27 (107)
Q Consensus 6 ~g~~~y~C~~C~thLa~~~~li 27 (107)
.+.+.|.|..|..-+...+.|.
T Consensus 8 ~~~k~~~C~~C~k~F~~~~~L~ 29 (44)
T 2epv_A 8 SGEKPYECNECGKAFIWKSLLI 29 (44)
T ss_dssp CCCCSEECSSSCCEESSHHHHH
T ss_pred CCCcCeECCCCCcccCchHHHH
Confidence 4667899999987776655543
No 71
>2d8z_A Four and A half LIM domains 2; skeletal muscle LIM-protein 3, LIM-domain protein DRAL, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=32.43 E-value=13 Score=21.62 Aligned_cols=11 Identities=36% Similarity=0.984 Sum_probs=6.4
Q ss_pred EEeccCCCCCC
Q 039667 11 YSCYRCRNLVS 21 (107)
Q Consensus 11 y~C~~C~thLa 21 (107)
|.|..|+.+|.
T Consensus 32 F~C~~C~~~L~ 42 (70)
T 2d8z_A 32 FVCTACRKQLS 42 (70)
T ss_dssp SBCSSSCCBCT
T ss_pred CccCCCCCcCC
Confidence 55666666654
No 72
>2eor_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=32.39 E-value=7.8 Score=19.89 Aligned_cols=22 Identities=18% Similarity=0.533 Sum_probs=16.3
Q ss_pred CCCCeEEeccCCCCCCCCCCee
Q 039667 6 IGPRRYSCYRCRNLVSCHEDIV 27 (107)
Q Consensus 6 ~g~~~y~C~~C~thLa~~~~li 27 (107)
.+.+.|.|..|..-+...+.|.
T Consensus 8 ~~~~~~~C~~C~k~f~~~~~L~ 29 (46)
T 2eor_A 8 TGEKPYNCEECGKAFIHDSQLQ 29 (46)
T ss_dssp SCCCSEECTTTCCEESSHHHHH
T ss_pred CCCcCccCCCCCCCcCCHHHHH
Confidence 4677899999987776655543
No 73
>1vd4_A Transcription initiation factor IIE, alpha subunit; zinc finger; NMR {Homo sapiens} SCOP: g.41.3.1
Probab=32.09 E-value=17 Score=20.32 Aligned_cols=19 Identities=16% Similarity=0.364 Sum_probs=11.8
Q ss_pred CCCCeEEeccCCCCCCCCC
Q 039667 6 IGPRRYSCYRCRNLVSCHE 24 (107)
Q Consensus 6 ~g~~~y~C~~C~thLa~~~ 24 (107)
.|.++|.|..|+.-+...+
T Consensus 10 ~~~k~~~C~~C~k~F~~~~ 28 (62)
T 1vd4_A 10 TNRASFKCPVCSSTFTDLE 28 (62)
T ss_dssp CSSSEEECSSSCCEEEHHH
T ss_pred CCCCCccCCCCCchhccHH
Confidence 4566788877776544433
No 74
>2ytg_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=32.06 E-value=11 Score=19.27 Aligned_cols=22 Identities=14% Similarity=0.439 Sum_probs=16.3
Q ss_pred CCCCeEEeccCCCCCCCCCCee
Q 039667 6 IGPRRYSCYRCRNLVSCHEDIV 27 (107)
Q Consensus 6 ~g~~~y~C~~C~thLa~~~~li 27 (107)
.+.+.|.|..|..-+...+.|.
T Consensus 8 ~~~~~~~C~~C~k~f~~~~~L~ 29 (46)
T 2ytg_A 8 TGEKPFKCGECGKSYNQRVHLT 29 (46)
T ss_dssp SSCCSEECTTTCCEESSSHHHH
T ss_pred CCCCCeECCCCCcccCCHHHHH
Confidence 5677899999987776665554
No 75
>2emj_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eoi_A
Probab=32.05 E-value=8.5 Score=19.87 Aligned_cols=22 Identities=18% Similarity=0.554 Sum_probs=16.0
Q ss_pred CCCCeEEeccCCCCCCCCCCee
Q 039667 6 IGPRRYSCYRCRNLVSCHEDIV 27 (107)
Q Consensus 6 ~g~~~y~C~~C~thLa~~~~li 27 (107)
.+.+.|.|..|..-+...+.|.
T Consensus 8 ~~~k~~~C~~C~k~F~~~~~L~ 29 (46)
T 2emj_A 8 TGEKPFECAECGKSFSISSQLA 29 (46)
T ss_dssp CCCCSEECSSSSCEESSHHHHH
T ss_pred CCCCCEECCCCCcccCCHHHHH
Confidence 5677899999987766655543
No 76
>2ytf_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=32.01 E-value=8.2 Score=19.79 Aligned_cols=22 Identities=14% Similarity=0.676 Sum_probs=16.3
Q ss_pred CCCCeEEeccCCCCCCCCCCee
Q 039667 6 IGPRRYSCYRCRNLVSCHEDIV 27 (107)
Q Consensus 6 ~g~~~y~C~~C~thLa~~~~li 27 (107)
.+.+.|.|..|..-+...+.|.
T Consensus 8 ~~~k~~~C~~C~k~f~~~~~L~ 29 (46)
T 2ytf_A 8 TGEKPFECSECQKAFNTKSNLI 29 (46)
T ss_dssp CCCCSEECSSSCCEESSHHHHH
T ss_pred CCCCCcCCCCCCcccCCHHHHH
Confidence 4677899999987776655543
No 77
>2em8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=31.93 E-value=8.2 Score=19.93 Aligned_cols=22 Identities=23% Similarity=0.446 Sum_probs=15.9
Q ss_pred cCCCCeEEeccCCCCCCCCCCe
Q 039667 5 LIGPRRYSCYRCRNLVSCHEDI 26 (107)
Q Consensus 5 l~g~~~y~C~~C~thLa~~~~l 26 (107)
-.+.+.|.|..|..-+...+.|
T Consensus 7 h~~~k~~~C~~C~k~f~~~~~L 28 (46)
T 2em8_A 7 GSGEKPYKCVECGKGYKRRLDL 28 (46)
T ss_dssp CCSCCSEECSSSCCEESSHHHH
T ss_pred CCCCCCeECcccCchhCCHHHH
Confidence 3567889999998776665544
No 78
>2emx_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=31.92 E-value=8.8 Score=19.54 Aligned_cols=22 Identities=18% Similarity=0.539 Sum_probs=16.3
Q ss_pred CCCCeEEeccCCCCCCCCCCee
Q 039667 6 IGPRRYSCYRCRNLVSCHEDIV 27 (107)
Q Consensus 6 ~g~~~y~C~~C~thLa~~~~li 27 (107)
.|.+.|.|..|..-+...+.|.
T Consensus 6 ~~~k~~~C~~C~k~f~~~~~L~ 27 (44)
T 2emx_A 6 SGEKPFGCSCCEKAFSSKSYLL 27 (44)
T ss_dssp SSCCCEECSSSSCEESSHHHHH
T ss_pred CCCcCccCCCCCcccCCHHHHH
Confidence 5678899999987766655543
No 79
>1x68_A FHL5 protein; four-and-A-half LIM protein 5, zinc finger domain, AN actin- interacting protein, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=31.85 E-value=14 Score=21.91 Aligned_cols=9 Identities=33% Similarity=0.921 Sum_probs=4.4
Q ss_pred eccCCCCCC
Q 039667 13 CYRCRNLVS 21 (107)
Q Consensus 13 C~~C~thLa 21 (107)
|..|+.++.
T Consensus 8 C~~C~~~I~ 16 (76)
T 1x68_A 8 CVACSKPIS 16 (76)
T ss_dssp CTTTCCCCC
T ss_pred CccCCCccc
Confidence 444554444
No 80
>1bkb_A Translation initiation factor 5A; 1.75A {Pyrobaculum aerophilum} SCOP: b.34.5.2 b.40.4.5
Probab=31.80 E-value=28 Score=23.87 Aligned_cols=30 Identities=20% Similarity=0.156 Sum_probs=26.3
Q ss_pred eCCCceEEEeecccccccCCccceeeceec
Q 039667 32 QASSGRAFLFSHAANIVEGPKEDQHLLTGL 61 (107)
Q Consensus 32 ~G~~G~AyLf~~v~Nv~~g~~e~r~m~TG~ 61 (107)
.|++|.|+.=-++.|+..|...++..-+|-
T Consensus 37 pGKgG~A~vr~k~knl~tG~~~e~tf~s~~ 66 (136)
T 1bkb_A 37 TGKHGSAKARIVAVGVFDGGKRTLSLPVDA 66 (136)
T ss_dssp CSTTSCCEEEEEEEETTTCCEEEEEEETTS
T ss_pred CCCCCceEEEEEEEECCCCCeEEEEEcCCC
Confidence 699999999999999999999888777764
No 81
>2eow_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=31.73 E-value=8.9 Score=19.65 Aligned_cols=22 Identities=18% Similarity=0.613 Sum_probs=16.2
Q ss_pred CCCCeEEeccCCCCCCCCCCee
Q 039667 6 IGPRRYSCYRCRNLVSCHEDIV 27 (107)
Q Consensus 6 ~g~~~y~C~~C~thLa~~~~li 27 (107)
.|.+.|.|..|..-+...+.|.
T Consensus 8 ~~~k~~~C~~C~k~f~~~~~L~ 29 (46)
T 2eow_A 8 TGEKPYKCNECGKAFRARSSLA 29 (46)
T ss_dssp CCCCCEECTTSCCEESSHHHHH
T ss_pred CCCCCeeccccCChhcCHHHHH
Confidence 4678899999987766655543
No 82
>3cpf_A Eukaryotic translation initiation factor 5A-1; structural genomics consortium, leukemia, apoptosis, SGC, HY initiation factor, nucleus; 2.50A {Homo sapiens}
Probab=31.65 E-value=23 Score=24.45 Aligned_cols=32 Identities=16% Similarity=0.105 Sum_probs=23.0
Q ss_pred ceeCCCceEEEeecccccccCCccceeeceec
Q 039667 30 GFQASSGRAFLFSHAANIVEGPKEDQHLLTGL 61 (107)
Q Consensus 30 ~f~G~~G~AyLf~~v~Nv~~g~~e~r~m~TG~ 61 (107)
.=.|++|.|+.--++.|+..|...++..-+|-
T Consensus 33 ~KpGKgG~A~vr~k~knl~TG~~~e~tf~s~~ 64 (138)
T 3cpf_A 33 SKTGKHGHAKVHLVGIDIFTGKKYEDICPSTH 64 (138)
T ss_dssp ECC----CCEEEEEEEETTTCCEEEEEEETTS
T ss_pred ccCCCCccEEEEEEEEECCCCCEEEEEeCCCC
Confidence 33699999999999999999999887776654
No 83
>2em7_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=31.48 E-value=8.9 Score=19.72 Aligned_cols=22 Identities=27% Similarity=0.735 Sum_probs=15.9
Q ss_pred CCCCeEEeccCCCCCCCCCCee
Q 039667 6 IGPRRYSCYRCRNLVSCHEDIV 27 (107)
Q Consensus 6 ~g~~~y~C~~C~thLa~~~~li 27 (107)
.+.+.|.|..|..-+...+.|.
T Consensus 8 ~~~k~~~C~~C~k~f~~~~~L~ 29 (46)
T 2em7_A 8 TGEKPYKCEECGKGFICRRDLY 29 (46)
T ss_dssp SCCCSEECSSSCCEESCHHHHH
T ss_pred CCCcCccCCCccchhCCHHHHH
Confidence 5677899999987666655443
No 84
>3uk3_C Zinc finger protein 217; transcription factor, DNA binding, DNA-metal BI protein complex; 2.10A {Homo sapiens}
Probab=31.48 E-value=5.4 Score=21.43 Aligned_cols=21 Identities=14% Similarity=0.357 Sum_probs=12.7
Q ss_pred CCCeEEeccCCCCCCCCCCee
Q 039667 7 GPRRYSCYRCRNLVSCHEDIV 27 (107)
Q Consensus 7 g~~~y~C~~C~thLa~~~~li 27 (107)
|.+.|.|..|..-....+.|.
T Consensus 1 g~~~~~C~~C~~~f~~~~~l~ 21 (57)
T 3uk3_C 1 GSSSRECSYCGKFFRSNYYLN 21 (57)
T ss_dssp ----CBCTTTCCBCSCHHHHH
T ss_pred CCCCccCCCCcchhCChHHHH
Confidence 456788988887777666554
No 85
>2eof_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=31.26 E-value=8.8 Score=19.40 Aligned_cols=22 Identities=18% Similarity=0.702 Sum_probs=16.3
Q ss_pred CCCCeEEeccCCCCCCCCCCee
Q 039667 6 IGPRRYSCYRCRNLVSCHEDIV 27 (107)
Q Consensus 6 ~g~~~y~C~~C~thLa~~~~li 27 (107)
.|.+.|.|..|..-+...+.|.
T Consensus 8 ~~~k~~~C~~C~k~f~~~~~L~ 29 (44)
T 2eof_A 8 TGEKPYECNECQKAFNTKSNLM 29 (44)
T ss_dssp SCCCSEECTTTCCEESCHHHHH
T ss_pred CCCCCeECCCCCcccCCHhHHH
Confidence 5677899999987776655543
No 86
>1x4l_A Skeletal muscle LIM-protein 3; LIM domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=31.22 E-value=16 Score=21.37 Aligned_cols=11 Identities=18% Similarity=0.760 Sum_probs=6.8
Q ss_pred EEeccCCCCCC
Q 039667 11 YSCYRCRNLVS 21 (107)
Q Consensus 11 y~C~~C~thLa 21 (107)
|.|..|+.+|.
T Consensus 36 F~C~~C~~~L~ 46 (72)
T 1x4l_A 36 FNCKKCSLSLV 46 (72)
T ss_dssp CBCSSSCCBCT
T ss_pred CEeccCCCcCC
Confidence 56666666664
No 87
>2el4_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eog_A 2em1_A 2emw_A 2eok_A
Probab=31.17 E-value=9 Score=19.63 Aligned_cols=22 Identities=23% Similarity=0.668 Sum_probs=16.4
Q ss_pred CCCCeEEeccCCCCCCCCCCee
Q 039667 6 IGPRRYSCYRCRNLVSCHEDIV 27 (107)
Q Consensus 6 ~g~~~y~C~~C~thLa~~~~li 27 (107)
.|.+.|.|..|..-+...+.|.
T Consensus 8 ~~~k~~~C~~C~k~f~~~~~L~ 29 (46)
T 2el4_A 8 TGVKPYGCSQCAKTFSLKSQLI 29 (46)
T ss_dssp CCCCSEECSSSSCEESSHHHHH
T ss_pred CCCCceECCCCCchhCCHHHHH
Confidence 5677899999987776655543
No 88
>2egq_A FHL1 protein; LIM domain, four and A half LIM domains protein 1, skeletal muscle LIM- protein 1, SLIM 1, structural genomics NPPSFA; NMR {Homo sapiens}
Probab=31.11 E-value=10 Score=22.50 Aligned_cols=11 Identities=27% Similarity=0.809 Sum_probs=6.4
Q ss_pred EeccCCCCCCC
Q 039667 12 SCYRCRNLVSC 22 (107)
Q Consensus 12 ~C~~C~thLa~ 22 (107)
.|..|+.++..
T Consensus 17 ~C~~C~~~I~~ 27 (77)
T 2egq_A 17 KCAGCKNPITG 27 (77)
T ss_dssp CCSSSCCCCCC
T ss_pred cCcccCCcccC
Confidence 46666666654
No 89
>2xqn_T Testin, TESS; metal-binding protein, cytoskeleton, focal adhesion, acrosom; 2.62A {Homo sapiens}
Probab=31.03 E-value=17 Score=23.56 Aligned_cols=27 Identities=7% Similarity=0.438 Sum_probs=18.3
Q ss_pred eEEeccCCCCCCCCCCeeeeceeCCCceEEEee
Q 039667 10 RYSCYRCRNLVSCHEDIVSKGFQASSGRAFLFS 42 (107)
Q Consensus 10 ~y~C~~C~thLa~~~~liSk~f~G~~G~AyLf~ 42 (107)
-|.|..|+.+|+.. .|.-+.|+.|--.
T Consensus 30 CF~C~~C~~~L~~~------~f~~~~g~~yC~~ 56 (126)
T 2xqn_T 30 HFCCFDCDSILAGE------IYVMVNDKPVCKP 56 (126)
T ss_dssp GSBCTTTCCBCTTS------EEEEETTEEEEHH
T ss_pred CCCcCCCCCCCCcC------EEEeECCEEechH
Confidence 37899999988742 3555667777643
No 90
>2en1_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=30.92 E-value=7 Score=20.16 Aligned_cols=21 Identities=14% Similarity=0.539 Sum_probs=15.1
Q ss_pred CCCCeEEeccCCCCCCCCCCe
Q 039667 6 IGPRRYSCYRCRNLVSCHEDI 26 (107)
Q Consensus 6 ~g~~~y~C~~C~thLa~~~~l 26 (107)
.|.+.|.|..|..-....+.|
T Consensus 8 ~~~~~~~C~~C~k~f~~~~~L 28 (46)
T 2en1_A 8 SGEKPFKCEECGKRFTQNSQL 28 (46)
T ss_dssp CCCCSEEETTTTEEESSHHHH
T ss_pred CCCCCeeCCCCCcccCCHHHH
Confidence 567889999998766655444
No 91
>2emm_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=30.90 E-value=8.9 Score=19.64 Aligned_cols=21 Identities=19% Similarity=0.411 Sum_probs=15.6
Q ss_pred CCCCeEEeccCCCCCCCCCCe
Q 039667 6 IGPRRYSCYRCRNLVSCHEDI 26 (107)
Q Consensus 6 ~g~~~y~C~~C~thLa~~~~l 26 (107)
.+.+.|.|..|..-+...+.|
T Consensus 8 ~~~k~~~C~~C~k~f~~~~~L 28 (46)
T 2emm_A 8 TGERPHKCNECGKSFIQSAHL 28 (46)
T ss_dssp SCCCSEECSSSCCEESSHHHH
T ss_pred CCCCCeeCCCCChhhCCHHHH
Confidence 567789999998776665544
No 92
>2ctu_A Zinc finger protein 483; zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=30.83 E-value=26 Score=19.19 Aligned_cols=23 Identities=17% Similarity=0.478 Sum_probs=18.4
Q ss_pred CCCCeEEeccCCCCCCCCCCeee
Q 039667 6 IGPRRYSCYRCRNLVSCHEDIVS 28 (107)
Q Consensus 6 ~g~~~y~C~~C~thLa~~~~liS 28 (107)
.|.+.|.|..|..-+...+.|..
T Consensus 14 ~~~~~~~C~~C~k~f~~~~~l~~ 36 (73)
T 2ctu_A 14 LGDRSQKCSKCGIIFIRRSTLSR 36 (73)
T ss_dssp CCCSEEECSSSCCEEECCCCCCC
T ss_pred CCCCCeeCCcccchhCCHHHhCc
Confidence 46788999999988887777665
No 93
>2cur_A Skeletal muscle LIM-protein 1; four and A half LIM domains protein 1, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=30.79 E-value=14 Score=21.36 Aligned_cols=11 Identities=18% Similarity=0.824 Sum_probs=5.6
Q ss_pred EEeccCCCCCC
Q 039667 11 YSCYRCRNLVS 21 (107)
Q Consensus 11 y~C~~C~thLa 21 (107)
|.|..|+.+|.
T Consensus 32 F~C~~C~~~L~ 42 (69)
T 2cur_A 32 FVCVTCSKKLA 42 (69)
T ss_dssp TBCTTTCCBCT
T ss_pred CEECCCCCCCC
Confidence 44555555554
No 94
>2eml_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=30.73 E-value=9 Score=19.70 Aligned_cols=22 Identities=23% Similarity=0.585 Sum_probs=15.9
Q ss_pred CCCCeEEeccCCCCCCCCCCee
Q 039667 6 IGPRRYSCYRCRNLVSCHEDIV 27 (107)
Q Consensus 6 ~g~~~y~C~~C~thLa~~~~li 27 (107)
.|.+.|.|..|..-+...+.|.
T Consensus 8 ~~~k~~~C~~C~k~f~~~~~L~ 29 (46)
T 2eml_A 8 TGEKPYECSVCGKAFSHRQSLS 29 (46)
T ss_dssp SSCCSEECSSSCCEESSHHHHH
T ss_pred CCCCCeeCCCcCCccCCHHHHH
Confidence 5678899999987666655443
No 95
>2yso_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=30.70 E-value=10 Score=19.46 Aligned_cols=23 Identities=9% Similarity=0.209 Sum_probs=16.6
Q ss_pred cCCCCeEEeccCCCCCCCCCCee
Q 039667 5 LIGPRRYSCYRCRNLVSCHEDIV 27 (107)
Q Consensus 5 l~g~~~y~C~~C~thLa~~~~li 27 (107)
-.+.+.|.|..|..-+...+.|.
T Consensus 7 H~~~~~~~C~~C~k~f~~~~~L~ 29 (46)
T 2yso_A 7 GSREKSHQCRECGEIFFQYVSLI 29 (46)
T ss_dssp SSCCCCEECTTTCCEESSHHHHH
T ss_pred cCCCCCEEccccChhhCCHHHHH
Confidence 35677899999987776655543
No 96
>2yrm_A B-cell lymphoma 6 protein; ZF-C2H2, zinc binding, DNA binding, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=30.65 E-value=6.8 Score=20.12 Aligned_cols=22 Identities=18% Similarity=0.359 Sum_probs=16.5
Q ss_pred CCCCeEEeccCCCCCCCCCCee
Q 039667 6 IGPRRYSCYRCRNLVSCHEDIV 27 (107)
Q Consensus 6 ~g~~~y~C~~C~thLa~~~~li 27 (107)
.+.+.|.|..|..-+...+.|.
T Consensus 6 ~~~k~~~C~~C~k~f~~~~~L~ 27 (43)
T 2yrm_A 6 SGNGAFFCNECDCRFSEEASLK 27 (43)
T ss_dssp SSSCCBCCSSSCCCBSSHHHHH
T ss_pred CCCCCEECCCCCCeeCChHHHH
Confidence 4567899999988877665554
No 97
>3er0_A Eukaryotic translation initiation factor 5A-2; yeast, low resolution, acetylation, hypusine, phosphoprotein, protein biosynthesis; 3.35A {Saccharomyces cerevisiae}
Probab=30.54 E-value=35 Score=24.59 Aligned_cols=31 Identities=19% Similarity=0.120 Sum_probs=26.6
Q ss_pred eeCCCceEEEeecccccccCCccceeeceec
Q 039667 31 FQASSGRAFLFSHAANIVEGPKEDQHLLTGL 61 (107)
Q Consensus 31 f~G~~G~AyLf~~v~Nv~~g~~e~r~m~TG~ 61 (107)
=.|++|.|+.=-++.|+..|...++..-+|-
T Consensus 58 KpGKHG~A~vr~k~knl~TG~k~E~tf~s~~ 88 (167)
T 3er0_A 58 KTGKHGHAKVHLVAIDIFTGKKLEDLSPSTH 88 (167)
T ss_dssp CCSSSSCCEEEEEEEESSSCCCEEEEEESSS
T ss_pred CCCCcCceEEEEEEEEcCCCCEEEEEEcCCC
Confidence 3699999999999999999999888876664
No 98
>2yrj_A Zinc finger protein 473; C2H2-type zinc finger, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=30.39 E-value=9.7 Score=19.49 Aligned_cols=22 Identities=18% Similarity=0.566 Sum_probs=15.9
Q ss_pred CCCCeEEeccCCCCCCCCCCee
Q 039667 6 IGPRRYSCYRCRNLVSCHEDIV 27 (107)
Q Consensus 6 ~g~~~y~C~~C~thLa~~~~li 27 (107)
.+.+.|.|..|..-+...+.|.
T Consensus 8 ~~~~~~~C~~C~k~f~~~~~L~ 29 (46)
T 2yrj_A 8 TGEKPYRCGECGKAFAQKANLT 29 (46)
T ss_dssp CCCCCEECSSSCCEESSHHHHH
T ss_pred CCCCCeECCCCCCccCCHHHHH
Confidence 4677899999987766655443
No 99
>2ep2_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=30.33 E-value=9.2 Score=19.65 Aligned_cols=22 Identities=18% Similarity=0.501 Sum_probs=16.3
Q ss_pred CCCCeEEeccCCCCCCCCCCee
Q 039667 6 IGPRRYSCYRCRNLVSCHEDIV 27 (107)
Q Consensus 6 ~g~~~y~C~~C~thLa~~~~li 27 (107)
.+.+.|.|..|..-++..+.|.
T Consensus 8 ~~~k~~~C~~C~k~f~~~~~L~ 29 (46)
T 2ep2_A 8 TGEKPYECSICGKSFTKKSQLH 29 (46)
T ss_dssp SCCCSEECSSSCCEESSHHHHH
T ss_pred CCCcCcCCCCCCcccCCHHHHH
Confidence 5678899999987776655554
No 100
>2em5_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=30.29 E-value=9.1 Score=19.75 Aligned_cols=22 Identities=9% Similarity=0.262 Sum_probs=16.2
Q ss_pred CCCCeEEeccCCCCCCCCCCee
Q 039667 6 IGPRRYSCYRCRNLVSCHEDIV 27 (107)
Q Consensus 6 ~g~~~y~C~~C~thLa~~~~li 27 (107)
.+.+.|.|..|..-++..+.|.
T Consensus 8 ~~~~~~~C~~C~k~f~~~~~L~ 29 (46)
T 2em5_A 8 SSTKSHQCHECGRGFTLKSHLN 29 (46)
T ss_dssp CCSCSEECSSSCCEESSHHHHH
T ss_pred CCCCCeECCcCCCccCCHHHHH
Confidence 4667899999987776655543
No 101
>2ehe_A Four and A half LIM domains 3; FHL-3, skeletal muscle LIM- protein 2, SLIM 2, FHL3, SLIM2, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=30.28 E-value=14 Score=22.11 Aligned_cols=17 Identities=18% Similarity=0.544 Sum_probs=10.7
Q ss_pred EeccCCCCCCCCCCeee
Q 039667 12 SCYRCRNLVSCHEDIVS 28 (107)
Q Consensus 12 ~C~~C~thLa~~~~liS 28 (107)
.|..|+.++...+.+|+
T Consensus 17 ~C~~C~~~I~~~~~~~~ 33 (82)
T 2ehe_A 17 TCAECQQLIGHDSRELF 33 (82)
T ss_dssp BCTTTCCBCCSSCCBCC
T ss_pred cCccCCCccccCcEEEE
Confidence 57777777775455544
No 102
>2em2_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=30.14 E-value=9.2 Score=19.72 Aligned_cols=22 Identities=14% Similarity=0.463 Sum_probs=16.3
Q ss_pred CCCCeEEeccCCCCCCCCCCee
Q 039667 6 IGPRRYSCYRCRNLVSCHEDIV 27 (107)
Q Consensus 6 ~g~~~y~C~~C~thLa~~~~li 27 (107)
.+.+.|.|..|..-+...+.|.
T Consensus 8 ~~~k~~~C~~C~k~f~~~~~L~ 29 (46)
T 2em2_A 8 SGEKPFKCKECGKAFRQNIHLA 29 (46)
T ss_dssp CCCCSEECSSSCCEESSHHHHH
T ss_pred CCCCCEECCcCCchhCCHHHHH
Confidence 4677899999987776655543
No 103
>2em4_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=30.13 E-value=9.3 Score=19.70 Aligned_cols=22 Identities=23% Similarity=0.694 Sum_probs=16.4
Q ss_pred CCCCeEEeccCCCCCCCCCCee
Q 039667 6 IGPRRYSCYRCRNLVSCHEDIV 27 (107)
Q Consensus 6 ~g~~~y~C~~C~thLa~~~~li 27 (107)
.+.+.|.|..|..-+...+.|.
T Consensus 8 ~~~k~~~C~~C~k~f~~~~~L~ 29 (46)
T 2em4_A 8 TGQRPYECIECGKAFKTKSSLI 29 (46)
T ss_dssp CCSSSEECSSSCCEESSHHHHH
T ss_pred CCCcCcCCCCCCCccCCHHHHH
Confidence 4677899999988777665553
No 104
>2enc_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=30.02 E-value=9.3 Score=19.64 Aligned_cols=22 Identities=14% Similarity=0.333 Sum_probs=16.0
Q ss_pred cCCCCeEEeccCCCCCCCCCCe
Q 039667 5 LIGPRRYSCYRCRNLVSCHEDI 26 (107)
Q Consensus 5 l~g~~~y~C~~C~thLa~~~~l 26 (107)
-.+.+.|.|..|..-+...+.|
T Consensus 7 H~~~k~~~C~~C~k~f~~~~~L 28 (46)
T 2enc_A 7 GSGEKPFKCEECGKGFYTNSQC 28 (46)
T ss_dssp CCCCCSEECSSSCCEESSHHHH
T ss_pred CCCCCCcCCCCCCCcCCChHHH
Confidence 3567889999998776665554
No 105
>1wyh_A SLIM 2, skeletal muscle LIM-protein 2; structural genomics, riken structural genomics/proteomics initiative, RSGI, NPPSFA; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=29.99 E-value=20 Score=20.73 Aligned_cols=11 Identities=18% Similarity=0.730 Sum_probs=5.7
Q ss_pred EEeccCCCCCC
Q 039667 11 YSCYRCRNLVS 21 (107)
Q Consensus 11 y~C~~C~thLa 21 (107)
|.|..|+.+|.
T Consensus 34 F~C~~C~~~L~ 44 (72)
T 1wyh_A 34 FLCSGCEQPLG 44 (72)
T ss_dssp CBCTTTCCBTT
T ss_pred CeECCCCCcCC
Confidence 45555555554
No 106
>2enf_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=29.98 E-value=7.8 Score=19.97 Aligned_cols=22 Identities=23% Similarity=0.697 Sum_probs=16.8
Q ss_pred CCCCeEEeccCCCCCCCCCCee
Q 039667 6 IGPRRYSCYRCRNLVSCHEDIV 27 (107)
Q Consensus 6 ~g~~~y~C~~C~thLa~~~~li 27 (107)
.+.+.|.|..|..-++..+.|.
T Consensus 8 ~~~k~~~C~~C~k~F~~~~~L~ 29 (46)
T 2enf_A 8 TGEKPYKCNECGKVFTQNSHLV 29 (46)
T ss_dssp CCCCSCBCSSSCCBCSSHHHHH
T ss_pred CCCcCeECCCCCcccCCHHHHH
Confidence 5677899999988777766554
No 107
>2emp_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=29.95 E-value=9.8 Score=19.55 Aligned_cols=22 Identities=23% Similarity=0.555 Sum_probs=16.1
Q ss_pred CCCCeEEeccCCCCCCCCCCee
Q 039667 6 IGPRRYSCYRCRNLVSCHEDIV 27 (107)
Q Consensus 6 ~g~~~y~C~~C~thLa~~~~li 27 (107)
.|.+.|.|..|..-+...+.|.
T Consensus 8 ~~~k~~~C~~C~k~f~~~~~L~ 29 (46)
T 2emp_A 8 TGVKPYMCNECGKAFSVYSSLT 29 (46)
T ss_dssp SCCCSEECSSSCCEESCHHHHH
T ss_pred CCCcCeECCCCCchhCCHHHHH
Confidence 5677899999987766655543
No 108
>1a7i_A QCRP2 (LIM1); LIM domain containing proteins, metal-binding protein, zinc finger; NMR {Coturnix japonica} SCOP: g.39.1.3 g.39.1.3 PDB: 2o10_A
Probab=29.92 E-value=23 Score=21.18 Aligned_cols=11 Identities=27% Similarity=0.866 Sum_probs=5.7
Q ss_pred EEeccCCCCCC
Q 039667 11 YSCYRCRNLVS 21 (107)
Q Consensus 11 y~C~~C~thLa 21 (107)
|.|..|+.+|.
T Consensus 35 F~C~~C~~~L~ 45 (81)
T 1a7i_A 35 FLCMVCRKNLD 45 (81)
T ss_dssp EECSSSCCEEC
T ss_pred CccCCCCCCCC
Confidence 45555555554
No 109
>2enh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=29.91 E-value=11 Score=19.48 Aligned_cols=22 Identities=32% Similarity=0.729 Sum_probs=17.0
Q ss_pred CCCCeEEeccCCCCCCCCCCee
Q 039667 6 IGPRRYSCYRCRNLVSCHEDIV 27 (107)
Q Consensus 6 ~g~~~y~C~~C~thLa~~~~li 27 (107)
.+.+.|.|..|..-+...+.|.
T Consensus 8 ~~~k~~~C~~C~k~F~~~~~L~ 29 (46)
T 2enh_A 8 TGEKPYECDVCRKAFSHHASLT 29 (46)
T ss_dssp CCSSSCBCTTTCCBCSSSHHHH
T ss_pred CCCCCcCCCCcCchhCCHHHHH
Confidence 4667899999998777766654
No 110
>2ep3_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=29.81 E-value=9.3 Score=19.63 Aligned_cols=22 Identities=18% Similarity=0.591 Sum_probs=16.2
Q ss_pred CCCCeEEeccCCCCCCCCCCee
Q 039667 6 IGPRRYSCYRCRNLVSCHEDIV 27 (107)
Q Consensus 6 ~g~~~y~C~~C~thLa~~~~li 27 (107)
.+.+.|.|..|..-++..+.|.
T Consensus 8 ~~~k~~~C~~C~k~f~~~~~L~ 29 (46)
T 2ep3_A 8 TGEKPYRCAECGKAFTDRSNLF 29 (46)
T ss_dssp SCCCSEECSSSCCEESSHHHHH
T ss_pred CCCCCeECCCCCchhCCHHHHH
Confidence 4677899999987766655543
No 111
>2ytp_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=29.80 E-value=9.8 Score=19.61 Aligned_cols=22 Identities=23% Similarity=0.676 Sum_probs=16.1
Q ss_pred CCCCeEEeccCCCCCCCCCCee
Q 039667 6 IGPRRYSCYRCRNLVSCHEDIV 27 (107)
Q Consensus 6 ~g~~~y~C~~C~thLa~~~~li 27 (107)
.+.+.|.|..|..-++..+.|.
T Consensus 8 ~~~k~~~C~~C~k~F~~~~~L~ 29 (46)
T 2ytp_A 8 TGERHYECSECGKAFARKSTLI 29 (46)
T ss_dssp CCCCCEECSSSCCEESSHHHHH
T ss_pred CCCCCeECCcCCcccCCHHHHH
Confidence 4678899999987766655543
No 112
>2eme_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=29.74 E-value=9 Score=19.63 Aligned_cols=22 Identities=23% Similarity=0.570 Sum_probs=15.9
Q ss_pred CCCCeEEeccCCCCCCCCCCee
Q 039667 6 IGPRRYSCYRCRNLVSCHEDIV 27 (107)
Q Consensus 6 ~g~~~y~C~~C~thLa~~~~li 27 (107)
.+.+.|.|..|..-++..+.|.
T Consensus 8 ~~~k~~~C~~C~k~f~~~~~L~ 29 (46)
T 2eme_A 8 SGEKPYVCDYCGKAFGLSAELV 29 (46)
T ss_dssp CCCCSEECSSSCCEESSHHHHH
T ss_pred CCCCCeECCCCChhhCCHHHHH
Confidence 4667899999987766655543
No 113
>2emi_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=29.54 E-value=9.8 Score=19.54 Aligned_cols=22 Identities=23% Similarity=0.567 Sum_probs=16.0
Q ss_pred CCCCeEEeccCCCCCCCCCCee
Q 039667 6 IGPRRYSCYRCRNLVSCHEDIV 27 (107)
Q Consensus 6 ~g~~~y~C~~C~thLa~~~~li 27 (107)
.+.+.|.|..|..-+...+.|.
T Consensus 8 ~~~~~~~C~~C~k~F~~~~~L~ 29 (46)
T 2emi_A 8 TGERHYECSECGKAFIQKSTLS 29 (46)
T ss_dssp SSCCCEECSSSCCEESSHHHHH
T ss_pred CCCCCCCCCCCCcccCCHHHHH
Confidence 4677899999987766655543
No 114
>2em3_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=29.48 E-value=9.7 Score=19.56 Aligned_cols=22 Identities=18% Similarity=0.557 Sum_probs=16.2
Q ss_pred CCCCeEEeccCCCCCCCCCCee
Q 039667 6 IGPRRYSCYRCRNLVSCHEDIV 27 (107)
Q Consensus 6 ~g~~~y~C~~C~thLa~~~~li 27 (107)
.+.+.|.|..|..-+...+.|.
T Consensus 8 ~~~~~~~C~~C~k~F~~~~~L~ 29 (46)
T 2em3_A 8 TGEKPYECKVCSKAFTQKAHLA 29 (46)
T ss_dssp SSCCSEECSSSCCEESSHHHHH
T ss_pred CCCcCeECCCCCcccCCHHHHH
Confidence 4677899999987766655543
No 115
>2eq0_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=29.37 E-value=10 Score=19.48 Aligned_cols=22 Identities=18% Similarity=0.613 Sum_probs=16.0
Q ss_pred CCCCeEEeccCCCCCCCCCCee
Q 039667 6 IGPRRYSCYRCRNLVSCHEDIV 27 (107)
Q Consensus 6 ~g~~~y~C~~C~thLa~~~~li 27 (107)
.+.+.|.|..|..-++..+.|.
T Consensus 8 ~~~k~~~C~~C~k~F~~~~~L~ 29 (46)
T 2eq0_A 8 TGEKPYKCHECGKVFRRNSHLA 29 (46)
T ss_dssp TCCCCEECTTTCCEESSHHHHH
T ss_pred CCCCCeECCCCCchhCCHHHHH
Confidence 5678899999987666655543
No 116
>2eon_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=29.25 E-value=7.6 Score=20.15 Aligned_cols=22 Identities=23% Similarity=0.600 Sum_probs=16.4
Q ss_pred CCCCeEEeccCCCCCCCCCCee
Q 039667 6 IGPRRYSCYRCRNLVSCHEDIV 27 (107)
Q Consensus 6 ~g~~~y~C~~C~thLa~~~~li 27 (107)
.+.+.|.|..|..-+...+.|.
T Consensus 8 ~~~k~~~C~~C~k~f~~~~~L~ 29 (46)
T 2eon_A 8 TGEKPYKCQVCGKAFRVSSHLV 29 (46)
T ss_dssp SSCCSCBCSSSCCBCSSHHHHH
T ss_pred CCCcccCCCCCCcccCcHHHHH
Confidence 5678899999988777655543
No 117
>2emg_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=29.21 E-value=7.8 Score=19.96 Aligned_cols=22 Identities=14% Similarity=0.610 Sum_probs=16.6
Q ss_pred CCCCeEEeccCCCCCCCCCCee
Q 039667 6 IGPRRYSCYRCRNLVSCHEDIV 27 (107)
Q Consensus 6 ~g~~~y~C~~C~thLa~~~~li 27 (107)
.+.+.|.|..|..-+...+.|.
T Consensus 8 ~~~k~~~C~~C~k~f~~~~~L~ 29 (46)
T 2emg_A 8 TGENPFICSECGKVFTHKTNLI 29 (46)
T ss_dssp CSCCSCBCTTTCCBCSSHHHHH
T ss_pred CCCCCEECCccCcccCCHHHHH
Confidence 5667899999988777665554
No 118
>2yth_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=29.08 E-value=7.9 Score=20.02 Aligned_cols=22 Identities=14% Similarity=0.478 Sum_probs=16.8
Q ss_pred CCCCeEEeccCCCCCCCCCCee
Q 039667 6 IGPRRYSCYRCRNLVSCHEDIV 27 (107)
Q Consensus 6 ~g~~~y~C~~C~thLa~~~~li 27 (107)
.+.+.|.|..|..-+...+.|.
T Consensus 8 ~~~k~~~C~~C~k~f~~~~~L~ 29 (46)
T 2yth_A 8 SGEKPFQCEECGKRFTQNSHLH 29 (46)
T ss_dssp CCSSSBCCSSSCCCBSSHHHHH
T ss_pred CCCcCCCCCCCCcccCCHHHHH
Confidence 4677899999988777766554
No 119
>1yui_A GAGA-factor; complex (DNA-binding protein/DNA), chromatin remodeling, DNA binding protein/DNA complex; HET: DNA; NMR {Drosophila melanogaster} SCOP: g.37.1.1 PDB: 1yuj_A*
Probab=29.03 E-value=9.1 Score=20.68 Aligned_cols=21 Identities=10% Similarity=0.331 Sum_probs=15.4
Q ss_pred CCCCeEEeccCCCCCCCCCCe
Q 039667 6 IGPRRYSCYRCRNLVSCHEDI 26 (107)
Q Consensus 6 ~g~~~y~C~~C~thLa~~~~l 26 (107)
.|.+.|.|..|..-+...+.|
T Consensus 20 ~~~k~~~C~~C~k~f~~~~~L 40 (54)
T 1yui_A 20 QSEQPATCPICYAVIRQSRNL 40 (54)
T ss_dssp TSSCCEECTTTCCEESSHHHH
T ss_pred CCCCCccCCCCCcccCCHHHH
Confidence 456789999998776655544
No 120
>2ene_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=29.02 E-value=9.5 Score=19.60 Aligned_cols=22 Identities=18% Similarity=0.573 Sum_probs=15.9
Q ss_pred CCCCeEEeccCCCCCCCCCCee
Q 039667 6 IGPRRYSCYRCRNLVSCHEDIV 27 (107)
Q Consensus 6 ~g~~~y~C~~C~thLa~~~~li 27 (107)
.+.+.|.|..|..-....+.|.
T Consensus 8 ~~~k~~~C~~C~k~f~~~~~L~ 29 (46)
T 2ene_A 8 TGEKPYKCNECGKVFRHNSYLS 29 (46)
T ss_dssp CCSSSEECSSSCCEESSHHHHH
T ss_pred CCCCCeECCCCCchhCChHHHH
Confidence 4677899999987766655543
No 121
>2ytk_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=28.85 E-value=9.8 Score=19.53 Aligned_cols=22 Identities=18% Similarity=0.628 Sum_probs=16.1
Q ss_pred CCCCeEEeccCCCCCCCCCCee
Q 039667 6 IGPRRYSCYRCRNLVSCHEDIV 27 (107)
Q Consensus 6 ~g~~~y~C~~C~thLa~~~~li 27 (107)
.+.+.|.|..|..-+...+.|.
T Consensus 8 ~~~~~~~C~~C~k~f~~~~~L~ 29 (46)
T 2ytk_A 8 SGEKPYKCNECGKVFTQNSHLT 29 (46)
T ss_dssp SSSCSEECSSSCCEESSHHHHH
T ss_pred CCCCCEeCCcCCCccCCHHHHH
Confidence 4677899999987776655543
No 122
>2ep0_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=28.85 E-value=9.4 Score=19.63 Aligned_cols=22 Identities=18% Similarity=0.519 Sum_probs=15.6
Q ss_pred CCCCeEEeccCCCCCCCCCCee
Q 039667 6 IGPRRYSCYRCRNLVSCHEDIV 27 (107)
Q Consensus 6 ~g~~~y~C~~C~thLa~~~~li 27 (107)
.+.+.|.|..|..-+...+.|.
T Consensus 8 ~~~~~~~C~~C~k~f~~~~~L~ 29 (46)
T 2ep0_A 8 TGEKPYKCDVCHKSFRYGSSLT 29 (46)
T ss_dssp TTCCSEECSSSCCEESSHHHHH
T ss_pred CCCCCeeCcccCcccCChHHHH
Confidence 4667899999987666555443
No 123
>2em9_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2yrh_A
Probab=28.83 E-value=10 Score=19.43 Aligned_cols=22 Identities=18% Similarity=0.526 Sum_probs=15.8
Q ss_pred CCCCeEEeccCCCCCCCCCCee
Q 039667 6 IGPRRYSCYRCRNLVSCHEDIV 27 (107)
Q Consensus 6 ~g~~~y~C~~C~thLa~~~~li 27 (107)
.+.+.|.|..|..-....+.|.
T Consensus 8 ~~~k~~~C~~C~k~f~~~~~L~ 29 (46)
T 2em9_A 8 TGEKPYNCKECGKSFRWASCLL 29 (46)
T ss_dssp CCCCSEECSSSCCEESSHHHHH
T ss_pred CCCcCeECCccccccCChHHHH
Confidence 4667899999987666555443
No 124
>2el6_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens}
Probab=28.48 E-value=10 Score=19.50 Aligned_cols=22 Identities=23% Similarity=0.537 Sum_probs=16.1
Q ss_pred CCCCeEEeccCCCCCCCCCCee
Q 039667 6 IGPRRYSCYRCRNLVSCHEDIV 27 (107)
Q Consensus 6 ~g~~~y~C~~C~thLa~~~~li 27 (107)
.|.+.|.|..|..-+...+.|.
T Consensus 8 ~~~k~~~C~~C~k~f~~~~~L~ 29 (46)
T 2el6_A 8 AGVNPYKCSQCEKSFSGKLRLL 29 (46)
T ss_dssp CCCCSEECSSSSCEESSHHHHH
T ss_pred CCCCCeECCCCCcccCCHHHHH
Confidence 5678899999987766655543
No 125
>2ytj_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=28.46 E-value=9.6 Score=19.59 Aligned_cols=22 Identities=18% Similarity=0.644 Sum_probs=16.0
Q ss_pred CCCCeEEeccCCCCCCCCCCee
Q 039667 6 IGPRRYSCYRCRNLVSCHEDIV 27 (107)
Q Consensus 6 ~g~~~y~C~~C~thLa~~~~li 27 (107)
.|.+.|.|..|..-+...+.|.
T Consensus 8 ~~~k~~~C~~C~k~f~~~~~L~ 29 (46)
T 2ytj_A 8 TGEKPYICAECGKAFTIRSNLI 29 (46)
T ss_dssp SSCCSEECSSSCCEESSHHHHH
T ss_pred CCCcCeECCCCChhhCCHHHHH
Confidence 5677899999987766655543
No 126
>2yto_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=28.44 E-value=11 Score=19.46 Aligned_cols=22 Identities=18% Similarity=0.542 Sum_probs=16.4
Q ss_pred CCCCeEEeccCCCCCCCCCCee
Q 039667 6 IGPRRYSCYRCRNLVSCHEDIV 27 (107)
Q Consensus 6 ~g~~~y~C~~C~thLa~~~~li 27 (107)
.+.++|.|..|..-++..+.|.
T Consensus 8 ~~~k~~~C~~C~k~f~~~~~L~ 29 (46)
T 2yto_A 8 TGEKPYKCSDCGKAFTRKSGLH 29 (46)
T ss_dssp CSCCCEECSSSCCEESSHHHHH
T ss_pred CCCCCEECcccCCccCCHhHHH
Confidence 4667899999988777665554
No 127
>2ema_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2emc_A
Probab=28.39 E-value=10 Score=19.50 Aligned_cols=22 Identities=27% Similarity=0.736 Sum_probs=15.7
Q ss_pred CCCCeEEeccCCCCCCCCCCee
Q 039667 6 IGPRRYSCYRCRNLVSCHEDIV 27 (107)
Q Consensus 6 ~g~~~y~C~~C~thLa~~~~li 27 (107)
.|.+.|.|..|..-+...+.|.
T Consensus 8 ~~~k~~~C~~C~k~f~~~~~L~ 29 (46)
T 2ema_A 8 TGEKRYKCNECGKVFSRNSQLS 29 (46)
T ss_dssp TTSCCEECSSSCCEESSHHHHH
T ss_pred CCCcCcCCCCCcchhCCHHHHH
Confidence 4677899999987666555443
No 128
>2emf_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=28.38 E-value=10 Score=19.52 Aligned_cols=22 Identities=14% Similarity=0.533 Sum_probs=16.0
Q ss_pred CCCCeEEeccCCCCCCCCCCee
Q 039667 6 IGPRRYSCYRCRNLVSCHEDIV 27 (107)
Q Consensus 6 ~g~~~y~C~~C~thLa~~~~li 27 (107)
.+.+.|.|..|..-+...+.|.
T Consensus 8 ~~~k~~~C~~C~k~F~~~~~L~ 29 (46)
T 2emf_A 8 TGGKHFECTECGKAFTRKSTLS 29 (46)
T ss_dssp SSSCCEECSSSCCEESCHHHHH
T ss_pred CCCCCeECCCCCchhCCHHHHH
Confidence 4667899999987766655543
No 129
>2ytb_A Zinc finger protein 32; zinc-finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=28.33 E-value=8.1 Score=19.33 Aligned_cols=22 Identities=23% Similarity=0.567 Sum_probs=16.4
Q ss_pred CCCCeEEeccCCCCCCCCCCee
Q 039667 6 IGPRRYSCYRCRNLVSCHEDIV 27 (107)
Q Consensus 6 ~g~~~y~C~~C~thLa~~~~li 27 (107)
.|.+.|.|..|..-+...+.|.
T Consensus 7 ~~~k~~~C~~C~k~f~~~~~L~ 28 (42)
T 2ytb_A 7 GGEKPYRCDQCGKAFSQKGSLI 28 (42)
T ss_dssp CSCCSBCCTTTTCCBSSHHHHH
T ss_pred CCCCCeeCCCccchhCCHHHHH
Confidence 4667899999988777655543
No 130
>2en8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=28.32 E-value=11 Score=19.33 Aligned_cols=22 Identities=14% Similarity=0.330 Sum_probs=16.0
Q ss_pred CCCCeEEeccCCCCCCCCCCee
Q 039667 6 IGPRRYSCYRCRNLVSCHEDIV 27 (107)
Q Consensus 6 ~g~~~y~C~~C~thLa~~~~li 27 (107)
.+.+.|.|..|..-.+..+.|.
T Consensus 8 ~~~~~~~C~~C~k~f~~~~~L~ 29 (46)
T 2en8_A 8 SGEKSHTCDECGKNFCYISALR 29 (46)
T ss_dssp CCCSSEECTTTCCEESSHHHHH
T ss_pred CCCCCeECCCcCcccCCHHHHH
Confidence 4677899999987766655543
No 131
>3izc_U 60S ribosomal protein RPL21 (L21E); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins; NMR {Saccharomyces cerevisiae} PDB: 3izs_U 3o58_T 3o5h_T 3u5e_T 3u5i_T 4b6a_T
Probab=28.19 E-value=29 Score=25.14 Aligned_cols=35 Identities=23% Similarity=0.277 Sum_probs=24.5
Q ss_pred eceeCCCceEEEeec-----ccccccCCc--cceeeceecEE
Q 039667 29 KGFQASSGRAFLFSH-----AANIVEGPK--EDQHLLTGLHT 63 (107)
Q Consensus 29 k~f~G~~G~AyLf~~-----v~Nv~~g~~--e~r~m~TG~h~ 63 (107)
+.|+|++|+.|=+.+ +||...|.. ..|.-+.-.|+
T Consensus 55 k~YHGkTGrV~nvtq~AvgiiVnk~v~gkil~KrI~VriEHi 96 (160)
T 3izc_U 55 KFYQGKTGVVYNVTKSSVGVIINKMVGNRYLEKRLNLRVEHI 96 (160)
T ss_dssp GGGTTCEEEEEEECSSSEEEEECCCSSSSCCCEEEEECTTSE
T ss_pred cccCCCCeEEEeeCCcEEEEEEEEEECCEeeeeEEEEeHHHc
Confidence 689999999997663 678777776 45554444453
No 132
>2eom_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=28.18 E-value=8.6 Score=19.93 Aligned_cols=23 Identities=17% Similarity=0.359 Sum_probs=17.4
Q ss_pred cCCCCeEEeccCCCCCCCCCCee
Q 039667 5 LIGPRRYSCYRCRNLVSCHEDIV 27 (107)
Q Consensus 5 l~g~~~y~C~~C~thLa~~~~li 27 (107)
-.+.+.|.|..|..-+...+.|.
T Consensus 7 h~~~k~~~C~~C~k~F~~~~~L~ 29 (46)
T 2eom_A 7 GHGERGHRCSDCGKFFLQASNFI 29 (46)
T ss_dssp CCCCSSCCCSSSCCCCSSHHHHH
T ss_pred CCCCCCcCCCCCCCeeCChHHHH
Confidence 35678899999998877766554
No 133
>1ard_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 PDB: 1arf_A 1are_A
Probab=27.93 E-value=6.2 Score=17.76 Aligned_cols=17 Identities=18% Similarity=0.552 Sum_probs=11.7
Q ss_pred eEEeccCCCCCCCCCCe
Q 039667 10 RYSCYRCRNLVSCHEDI 26 (107)
Q Consensus 10 ~y~C~~C~thLa~~~~l 26 (107)
+|.|..|..-+...+.|
T Consensus 2 ~~~C~~C~~~f~~~~~l 18 (29)
T 1ard_A 2 SFVCEVCTRAFARQEHL 18 (29)
T ss_dssp CCBCTTTCCBCSSHHHH
T ss_pred CeECCCCCcccCCHHHH
Confidence 57888888776655443
No 134
>2ytn_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=27.82 E-value=9 Score=19.70 Aligned_cols=22 Identities=18% Similarity=0.646 Sum_probs=16.7
Q ss_pred CCCCeEEeccCCCCCCCCCCee
Q 039667 6 IGPRRYSCYRCRNLVSCHEDIV 27 (107)
Q Consensus 6 ~g~~~y~C~~C~thLa~~~~li 27 (107)
.+.+.|.|..|..-++..+.|.
T Consensus 8 ~~~k~~~C~~C~k~F~~~~~L~ 29 (46)
T 2ytn_A 8 TGKKPYKCNECGKVFTQNSHLA 29 (46)
T ss_dssp SCCSSCBCTTTCCBCSSHHHHH
T ss_pred CCCcCeECCCCCCeeCCHHHHH
Confidence 5677899999988777766553
No 135
>2emh_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=27.79 E-value=11 Score=19.38 Aligned_cols=22 Identities=23% Similarity=0.611 Sum_probs=16.4
Q ss_pred CCCCeEEeccCCCCCCCCCCee
Q 039667 6 IGPRRYSCYRCRNLVSCHEDIV 27 (107)
Q Consensus 6 ~g~~~y~C~~C~thLa~~~~li 27 (107)
.|.+.|.|..|..-+...+.|.
T Consensus 8 ~~~k~~~C~~C~k~F~~~~~L~ 29 (46)
T 2emh_A 8 TGERPYICTVCGKAFTDRSNLI 29 (46)
T ss_dssp SCCCSEECTTTCCEESSHHHHH
T ss_pred CCCCCcCCCCCCchhCCHHHHH
Confidence 5677899999987776665553
No 136
>2epu_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=27.75 E-value=8.3 Score=19.82 Aligned_cols=21 Identities=14% Similarity=0.596 Sum_probs=15.0
Q ss_pred CCCCeEEeccCCCCCCCCCCe
Q 039667 6 IGPRRYSCYRCRNLVSCHEDI 26 (107)
Q Consensus 6 ~g~~~y~C~~C~thLa~~~~l 26 (107)
.+.+.|.|..|..-+...+.|
T Consensus 8 ~~~k~~~C~~C~k~F~~~~~L 28 (45)
T 2epu_A 8 TGQKPFECTHCGKSFRAKGNL 28 (45)
T ss_dssp CSCCSEEETTTTEEESSHHHH
T ss_pred CCCcCccCCCCCCccCChHHH
Confidence 456789999998766655444
No 137
>2eop_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=27.51 E-value=8.7 Score=19.68 Aligned_cols=22 Identities=18% Similarity=0.520 Sum_probs=16.6
Q ss_pred CCCCeEEeccCCCCCCCCCCee
Q 039667 6 IGPRRYSCYRCRNLVSCHEDIV 27 (107)
Q Consensus 6 ~g~~~y~C~~C~thLa~~~~li 27 (107)
.|.+.|.|..|..-+...+.|.
T Consensus 8 ~~~~~~~C~~C~k~f~~~~~L~ 29 (46)
T 2eop_A 8 TGEKPHECRECGKSFSFNSQLI 29 (46)
T ss_dssp CCCCSCBCTTTCCBCSSHHHHH
T ss_pred CCCCCeeCCCCCchhCCHHHHH
Confidence 5677899999988777666554
No 138
>2ysp_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=27.50 E-value=9.6 Score=19.59 Aligned_cols=21 Identities=19% Similarity=0.559 Sum_probs=15.2
Q ss_pred CCCCeEEeccCCCCCCCCCCe
Q 039667 6 IGPRRYSCYRCRNLVSCHEDI 26 (107)
Q Consensus 6 ~g~~~y~C~~C~thLa~~~~l 26 (107)
.+.+.|.|..|..-+...+.|
T Consensus 8 ~~~k~~~C~~C~k~f~~~~~L 28 (46)
T 2ysp_A 8 TGEKPYKCEKCGKGYNSKFNL 28 (46)
T ss_dssp SSCCSEEETTTTEEESCHHHH
T ss_pred CCCCCeECCCCCCccCCHHHH
Confidence 567789999998766655544
No 139
>2eq4_A Zinc finger protein 224; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=27.49 E-value=9.3 Score=19.57 Aligned_cols=22 Identities=23% Similarity=0.514 Sum_probs=16.5
Q ss_pred CCCCeEEeccCCCCCCCCCCee
Q 039667 6 IGPRRYSCYRCRNLVSCHEDIV 27 (107)
Q Consensus 6 ~g~~~y~C~~C~thLa~~~~li 27 (107)
.+.++|.|..|..-....+.|.
T Consensus 8 ~~~k~~~C~~C~k~f~~~~~L~ 29 (46)
T 2eq4_A 8 TGEKLYNCKECGKSFSRAPCLL 29 (46)
T ss_dssp SCCCCCCBTTTTBCCSCHHHHH
T ss_pred CCCCCeECCCCCCccCchHHHH
Confidence 4677899999988777665553
No 140
>2emz_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=27.07 E-value=9 Score=19.77 Aligned_cols=22 Identities=18% Similarity=0.502 Sum_probs=16.6
Q ss_pred CCCCeEEeccCCCCCCCCCCee
Q 039667 6 IGPRRYSCYRCRNLVSCHEDIV 27 (107)
Q Consensus 6 ~g~~~y~C~~C~thLa~~~~li 27 (107)
.+.+.|.|..|..-+...+.|.
T Consensus 8 ~~~k~~~C~~C~k~f~~~~~L~ 29 (46)
T 2emz_A 8 SGERPFKCNECGKGFGRRSHLA 29 (46)
T ss_dssp SCCCSCCCSSSCCCCSSHHHHH
T ss_pred CCCCCeECCCCCcccCCHHHHH
Confidence 5678899999988777665543
No 141
>2epx_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=27.06 E-value=9.3 Score=19.59 Aligned_cols=22 Identities=18% Similarity=0.605 Sum_probs=16.5
Q ss_pred CCCCeEEeccCCCCCCCCCCee
Q 039667 6 IGPRRYSCYRCRNLVSCHEDIV 27 (107)
Q Consensus 6 ~g~~~y~C~~C~thLa~~~~li 27 (107)
.|.+.|.|..|..-+...+.|.
T Consensus 8 ~~~k~~~C~~C~k~F~~~~~L~ 29 (47)
T 2epx_A 8 TGKKPYECIECGKAFIQNTSLI 29 (47)
T ss_dssp CCCCSBCCSSSCCCBSSHHHHH
T ss_pred CCCCCEECCccCchhCChHHHH
Confidence 5677899999988777665554
No 142
>2eoh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=26.99 E-value=8.7 Score=19.84 Aligned_cols=22 Identities=23% Similarity=0.507 Sum_probs=16.8
Q ss_pred CCCCeEEeccCCCCCCCCCCee
Q 039667 6 IGPRRYSCYRCRNLVSCHEDIV 27 (107)
Q Consensus 6 ~g~~~y~C~~C~thLa~~~~li 27 (107)
.+.+.|.|..|..-+...+.|.
T Consensus 8 ~~~k~~~C~~C~k~f~~~~~L~ 29 (46)
T 2eoh_A 8 SGKKPYECKECRKTFIQIGHLN 29 (46)
T ss_dssp CCSCSCCCSSSCCCCSSHHHHH
T ss_pred CCCCCcCCCCcCchhCCHHHHH
Confidence 4667899999998877766554
No 143
>2emy_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=26.98 E-value=11 Score=19.27 Aligned_cols=22 Identities=23% Similarity=0.569 Sum_probs=16.0
Q ss_pred CCCCeEEeccCCCCCCCCCCee
Q 039667 6 IGPRRYSCYRCRNLVSCHEDIV 27 (107)
Q Consensus 6 ~g~~~y~C~~C~thLa~~~~li 27 (107)
.+.+.|.|..|..-++..+.|.
T Consensus 8 ~~~k~~~C~~C~k~F~~~~~L~ 29 (46)
T 2emy_A 8 TGENPYECHECGKAFSRKYQLI 29 (46)
T ss_dssp CSSCCEECSSSCCEESSHHHHH
T ss_pred CCCcCcCCCCCCcccCcHHHHH
Confidence 4667899999987766655543
No 144
>2em6_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=26.71 E-value=9.7 Score=19.63 Aligned_cols=22 Identities=23% Similarity=0.513 Sum_probs=16.5
Q ss_pred CCCCeEEeccCCCCCCCCCCee
Q 039667 6 IGPRRYSCYRCRNLVSCHEDIV 27 (107)
Q Consensus 6 ~g~~~y~C~~C~thLa~~~~li 27 (107)
.+.+.|.|..|..-+...+.|.
T Consensus 8 ~~~k~~~C~~C~k~f~~~~~L~ 29 (46)
T 2em6_A 8 MGEKCYKCDVCGKEFSQSSHLQ 29 (46)
T ss_dssp CCCCCCBCSSSCCBCSSHHHHH
T ss_pred CCCCCeECCCCCcccCCHHHHH
Confidence 4667899999988777665554
No 145
>2eod_A TNF receptor-associated factor 4; zinc binding, NF-KB, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=26.46 E-value=22 Score=19.82 Aligned_cols=17 Identities=12% Similarity=0.165 Sum_probs=8.6
Q ss_pred CCCeEEec-cCCCCCCCC
Q 039667 7 GPRRYSCY-RCRNLVSCH 23 (107)
Q Consensus 7 g~~~y~C~-~C~thLa~~ 23 (107)
|.++|.|. .|..-....
T Consensus 33 ~~~p~~C~~~C~k~f~~~ 50 (66)
T 2eod_A 33 PRLPVACPNQCGVGTVAR 50 (66)
T ss_dssp SSSEEECTTCCSCCEEET
T ss_pred CCcCccCCcccCcccccH
Confidence 44556665 555544333
No 146
>2eln_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=26.43 E-value=12 Score=19.92 Aligned_cols=21 Identities=10% Similarity=0.110 Sum_probs=15.8
Q ss_pred CCCCeEEecc--CCCCCCCCCCe
Q 039667 6 IGPRRYSCYR--CRNLVSCHEDI 26 (107)
Q Consensus 6 ~g~~~y~C~~--C~thLa~~~~l 26 (107)
.|.++|.|.. |..-++..+.|
T Consensus 5 ~gekp~~C~~~~C~k~F~~~~~L 27 (38)
T 2eln_A 5 SSGILLKCPTDGCDYSTPDKYKL 27 (38)
T ss_dssp SCCCCEECSSSSCCCEESCHHHH
T ss_pred CCCCCCCCCCCCCCCccCCHHHH
Confidence 5678999986 98877766554
No 147
>2en7_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=26.41 E-value=7.9 Score=19.58 Aligned_cols=22 Identities=18% Similarity=0.557 Sum_probs=16.5
Q ss_pred CCCCeEEeccCCCCCCCCCCee
Q 039667 6 IGPRRYSCYRCRNLVSCHEDIV 27 (107)
Q Consensus 6 ~g~~~y~C~~C~thLa~~~~li 27 (107)
.+.+.|.|..|..-+...+.|.
T Consensus 8 ~~~k~~~C~~C~k~f~~~~~L~ 29 (44)
T 2en7_A 8 TGMKPYVCNECGKAFRSKSYLI 29 (44)
T ss_dssp SSSSSSCCTTTCCCCSSHHHHH
T ss_pred CCCcCeECCCCCCccCCHHHHH
Confidence 4667899999988777665553
No 148
>2emk_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ysv_A
Probab=26.30 E-value=9.7 Score=19.63 Aligned_cols=22 Identities=23% Similarity=0.622 Sum_probs=16.6
Q ss_pred CCCCeEEeccCCCCCCCCCCee
Q 039667 6 IGPRRYSCYRCRNLVSCHEDIV 27 (107)
Q Consensus 6 ~g~~~y~C~~C~thLa~~~~li 27 (107)
.+.+.|.|..|..-+...+.|.
T Consensus 8 ~~~k~~~C~~C~k~F~~~~~L~ 29 (46)
T 2emk_A 8 TGEKPYECKECGKAFSQTTHLI 29 (46)
T ss_dssp SSSCSCBCSSSCCBCSCHHHHH
T ss_pred CCCCceECCCCCchhCCHHHHH
Confidence 5667899999988777666554
No 149
>2ytq_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=26.27 E-value=10 Score=19.57 Aligned_cols=22 Identities=23% Similarity=0.632 Sum_probs=16.5
Q ss_pred CCCCeEEeccCCCCCCCCCCee
Q 039667 6 IGPRRYSCYRCRNLVSCHEDIV 27 (107)
Q Consensus 6 ~g~~~y~C~~C~thLa~~~~li 27 (107)
.+.+.|.|..|..-+...+.|.
T Consensus 8 ~~~k~~~C~~C~k~f~~~~~L~ 29 (46)
T 2ytq_A 8 AGEKPYGCSECGKAFSSKSYLI 29 (46)
T ss_dssp SCCCSCBCSSSCCBCSCHHHHH
T ss_pred CCCCCcCCCccChhhCChHHHH
Confidence 5677899999988777665554
No 150
>2en9_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=26.01 E-value=9.2 Score=19.72 Aligned_cols=22 Identities=14% Similarity=0.570 Sum_probs=16.5
Q ss_pred CCCCeEEeccCCCCCCCCCCee
Q 039667 6 IGPRRYSCYRCRNLVSCHEDIV 27 (107)
Q Consensus 6 ~g~~~y~C~~C~thLa~~~~li 27 (107)
.+.+.|.|..|..-+...+.|.
T Consensus 8 ~~~k~~~C~~C~k~F~~~~~L~ 29 (46)
T 2en9_A 8 AGKKLFKCNECKKTFTQSSSLT 29 (46)
T ss_dssp CSSCCCBCTTTCCBCSSHHHHH
T ss_pred CCCCCEECCccCcccCCHHHHH
Confidence 4667899999988777665543
No 151
>2elz_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=26.00 E-value=10 Score=19.59 Aligned_cols=22 Identities=14% Similarity=0.259 Sum_probs=16.4
Q ss_pred CCCCeEEeccCCCCCCCCCCee
Q 039667 6 IGPRRYSCYRCRNLVSCHEDIV 27 (107)
Q Consensus 6 ~g~~~y~C~~C~thLa~~~~li 27 (107)
.+.+.|.|..|..-+...+.|.
T Consensus 8 ~~~k~~~C~~C~k~F~~~~~L~ 29 (46)
T 2elz_A 8 SVEKPYKCEDCGKGYNRRLNLD 29 (46)
T ss_dssp CCCSSCBCSSSCCBCSSHHHHH
T ss_pred CCCCCeeCcccCchhCCHHHHH
Confidence 5677899999988777665543
No 152
>2en6_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=25.99 E-value=10 Score=19.47 Aligned_cols=22 Identities=23% Similarity=0.508 Sum_probs=15.8
Q ss_pred CCCCeEEeccCCCCCCCCCCee
Q 039667 6 IGPRRYSCYRCRNLVSCHEDIV 27 (107)
Q Consensus 6 ~g~~~y~C~~C~thLa~~~~li 27 (107)
.|.+.|.|..|..-+...+.|.
T Consensus 8 ~~~~~~~C~~C~k~f~~~~~L~ 29 (46)
T 2en6_A 8 SGEKPYGCNECGKTFSQKSILS 29 (46)
T ss_dssp CSSCCEEETTTTEEESSHHHHH
T ss_pred CCCcCeECCCCCcccCchHHHH
Confidence 5677899999987666655443
No 153
>2ep1_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=25.79 E-value=8.6 Score=19.71 Aligned_cols=22 Identities=18% Similarity=0.483 Sum_probs=16.6
Q ss_pred CCCCeEEeccCCCCCCCCCCee
Q 039667 6 IGPRRYSCYRCRNLVSCHEDIV 27 (107)
Q Consensus 6 ~g~~~y~C~~C~thLa~~~~li 27 (107)
.+.+.|.|..|..-+...+.|.
T Consensus 8 ~~~k~~~C~~C~k~f~~~~~L~ 29 (46)
T 2ep1_A 8 TGEKPYECSDCGKSFIKKSQLH 29 (46)
T ss_dssp SSCCSSCCSSSCCCCSSHHHHH
T ss_pred CCCCCcCCCCCCchhCCHHHHH
Confidence 4667899999988777666554
No 154
>2eoj_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=25.66 E-value=8.7 Score=19.48 Aligned_cols=22 Identities=27% Similarity=0.726 Sum_probs=15.9
Q ss_pred CCCCeEEeccCCCCCCCCCCee
Q 039667 6 IGPRRYSCYRCRNLVSCHEDIV 27 (107)
Q Consensus 6 ~g~~~y~C~~C~thLa~~~~li 27 (107)
.|.+.|.|..|..-+...+.|.
T Consensus 8 ~~~k~~~C~~C~k~f~~~~~L~ 29 (44)
T 2eoj_A 8 TGENPYECCECGKVFSRKDQLV 29 (44)
T ss_dssp SSCCSCEETTTTEECSSHHHHH
T ss_pred CCCcCeeCCCCCCccCCHHHHH
Confidence 4667899999987666655543
No 155
>2epq_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1
Probab=25.49 E-value=7.6 Score=19.99 Aligned_cols=22 Identities=23% Similarity=0.460 Sum_probs=15.8
Q ss_pred CCCCeEEeccCCCCCCCCCCee
Q 039667 6 IGPRRYSCYRCRNLVSCHEDIV 27 (107)
Q Consensus 6 ~g~~~y~C~~C~thLa~~~~li 27 (107)
.+.+.|.|..|..-+...+.|.
T Consensus 6 ~~~k~~~C~~C~k~f~~~~~l~ 27 (45)
T 2epq_A 6 SGEKPYSCPVCGLRFKRKDRMS 27 (45)
T ss_dssp SSCCSSEETTTTEECSCHHHHH
T ss_pred CCCCCCcCCCCCcccCCHHHHH
Confidence 4567899999987776655543
No 156
>1jni_A NAPB;, diheme cytochrome C NAPB; dihaem cytochrome C, proteolytic fragment, nitrate reductase subunit, oxidoreductase; HET: HEM; 1.25A {Haemophilus influenzae} SCOP: a.138.1.3
Probab=25.21 E-value=17 Score=25.38 Aligned_cols=28 Identities=32% Similarity=0.676 Sum_probs=10.9
Q ss_pred CCeEEeccCCCCCCCCCCeeeeceeCCC
Q 039667 8 PRRYSCYRCRNLVSCHEDIVSKGFQASS 35 (107)
Q Consensus 8 ~~~y~C~~C~thLa~~~~liSk~f~G~~ 35 (107)
++.|.|..|+++=+...-|+.-.|....
T Consensus 92 p~Ry~CtqCHVPQ~~~~PlV~N~F~~~~ 119 (123)
T 1jni_A 92 PRRYFCLQCHVSQANVDPIVPNDFKPMK 119 (123)
T ss_dssp CCSCCGGGTCCC----------------
T ss_pred ccceecccccCCcccccccccCccccch
Confidence 5789999999999999999988887654
No 157
>1twf_J DNA-directed RNA polymerases I, II, and III 8.3 K polypeptide; transcription, mRNA, multiprotein complex; HET: UTP; 2.30A {Saccharomyces cerevisiae} SCOP: a.4.11.1 PDB: 1i3q_J 1i6h_J 1k83_J* 1nik_J 1nt9_J 1pqv_J 1r5u_J 1r9s_J* 1r9t_J* 1sfo_J* 1twa_J* 1twc_J* 1i50_J* 1twg_J* 1twh_J* 1wcm_J 1y1v_J 1y1w_J 1y1y_J 1y77_J* ...
Probab=25.21 E-value=8.3 Score=24.55 Aligned_cols=18 Identities=28% Similarity=0.745 Sum_probs=15.1
Q ss_pred eeeecccCCCceeeeEEe
Q 039667 65 ADVYCADCGELLGWTYKR 82 (107)
Q Consensus 65 ~DI~C~~C~~~lGWkY~~ 82 (107)
=+|.|-+|+..+|=+|++
T Consensus 3 iPVRCFTCGkvi~~~we~ 20 (70)
T 1twf_J 3 VPVRCFSCGKVVGDKWES 20 (70)
T ss_dssp CCSBCTTTCCBCTTCHHH
T ss_pred CCeecCCCCCChHHHHHH
Confidence 468999999999987754
No 158
>2eoz_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=25.19 E-value=11 Score=19.43 Aligned_cols=22 Identities=23% Similarity=0.514 Sum_probs=16.1
Q ss_pred CCCCeEEeccCCCCCCCCCCee
Q 039667 6 IGPRRYSCYRCRNLVSCHEDIV 27 (107)
Q Consensus 6 ~g~~~y~C~~C~thLa~~~~li 27 (107)
.+.+.|.|..|..-+...+.|.
T Consensus 8 ~~~k~~~C~~C~k~f~~~~~L~ 29 (46)
T 2eoz_A 8 TGEKPYSCNVCGKAFVLSAHLN 29 (46)
T ss_dssp SSCCSEEETTTTEEESSHHHHH
T ss_pred CCCCCeECcccChhhCCHHHHH
Confidence 4667899999987766655543
No 159
>2em0_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens}
Probab=25.07 E-value=11 Score=19.36 Aligned_cols=22 Identities=18% Similarity=0.508 Sum_probs=16.3
Q ss_pred CCCCeEEeccCCCCCCCCCCee
Q 039667 6 IGPRRYSCYRCRNLVSCHEDIV 27 (107)
Q Consensus 6 ~g~~~y~C~~C~thLa~~~~li 27 (107)
.|.++|.|..|..-+...+.|.
T Consensus 8 ~~~k~~~C~~C~k~F~~~~~L~ 29 (46)
T 2em0_A 8 MGEKTWKCRECDMCFSQASSLR 29 (46)
T ss_dssp CCCCCCCCSSSCCCCSSHHHHH
T ss_pred CCCcCeECCCCCcccCCHHHHH
Confidence 4677899999988777665543
No 160
>2epz_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=24.84 E-value=10 Score=19.48 Aligned_cols=22 Identities=23% Similarity=0.555 Sum_probs=16.1
Q ss_pred CCCCeEEeccCCCCCCCCCCee
Q 039667 6 IGPRRYSCYRCRNLVSCHEDIV 27 (107)
Q Consensus 6 ~g~~~y~C~~C~thLa~~~~li 27 (107)
.+.+.|.|..|..-+...+.|.
T Consensus 8 ~~~k~~~C~~C~k~f~~~~~L~ 29 (46)
T 2epz_A 8 TGEKPFDCIDCGKAFSDHIGLN 29 (46)
T ss_dssp CCCCSBCCTTTCCCBSSHHHHH
T ss_pred CCCCCeECCCCCceeCCHHHHH
Confidence 4667899999987776655543
No 161
>2ytd_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=24.80 E-value=13 Score=18.96 Aligned_cols=21 Identities=24% Similarity=0.649 Sum_probs=15.2
Q ss_pred CCCCeEEeccCCCCCCCCCCe
Q 039667 6 IGPRRYSCYRCRNLVSCHEDI 26 (107)
Q Consensus 6 ~g~~~y~C~~C~thLa~~~~l 26 (107)
.+.+.|.|..|..-....+.|
T Consensus 8 ~~~k~~~C~~C~k~f~~~~~L 28 (46)
T 2ytd_A 8 SGEKPYKCSECGKAFHRHTHL 28 (46)
T ss_dssp CCCCSEECSSSCCEESSHHHH
T ss_pred CCCcCeECCCCCCeeCChHHH
Confidence 466789999998766655544
No 162
>3hks_A EIF-5A-2, eukaryotic translation initiation factor 5A-2; beta barrel, alternative splicing, hypusine, protein biosynthesis; 2.30A {Arabidopsis thaliana}
Probab=24.13 E-value=43 Score=24.09 Aligned_cols=31 Identities=16% Similarity=0.067 Sum_probs=26.5
Q ss_pred eeCCCceEEEeecccccccCCccceeeceec
Q 039667 31 FQASSGRAFLFSHAANIVEGPKEDQHLLTGL 61 (107)
Q Consensus 31 f~G~~G~AyLf~~v~Nv~~g~~e~r~m~TG~ 61 (107)
=.|++|.|+.=-++.|+..|...++..-+|-
T Consensus 56 KpGKhG~A~vr~k~knl~TGk~~E~tf~s~~ 86 (167)
T 3hks_A 56 KTGKHGHAKCHFVAIDIFTAKKLEDIVPSSH 86 (167)
T ss_dssp CSSTTCCCEEEEEEEETTTCCEEEEEEETTS
T ss_pred CCCCCCceEEEEEEEEcCCCCEEEEEEcCCC
Confidence 3699999999999999999999887777664
No 163
>4gzn_C ZFP-57, zinc finger protein 57; transcription-DNA complex; HET: DNA 5CM; 0.99A {Mus musculus}
Probab=23.71 E-value=13 Score=21.63 Aligned_cols=20 Identities=25% Similarity=0.504 Sum_probs=12.3
Q ss_pred CCCeEEeccCCCCCCCCCCe
Q 039667 7 GPRRYSCYRCRNLVSCHEDI 26 (107)
Q Consensus 7 g~~~y~C~~C~thLa~~~~l 26 (107)
|.++|.|..|+.-+...+.|
T Consensus 29 ~ekp~~C~~C~k~F~~~~~L 48 (60)
T 4gzn_C 29 GYRPRSCPECGKCFRDQSEV 48 (60)
T ss_dssp TCCCEECTTTCCEESSHHHH
T ss_pred CCcCeECCCCCCCcCCHHHH
Confidence 55677777777655554443
No 164
>2eq3_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=23.60 E-value=9 Score=19.62 Aligned_cols=22 Identities=23% Similarity=0.658 Sum_probs=16.0
Q ss_pred CCCCeEEeccCCCCCCCCCCee
Q 039667 6 IGPRRYSCYRCRNLVSCHEDIV 27 (107)
Q Consensus 6 ~g~~~y~C~~C~thLa~~~~li 27 (107)
.+.+.|.|..|..-+...+.|.
T Consensus 8 ~~~k~~~C~~C~k~f~~~~~L~ 29 (46)
T 2eq3_A 8 TGEKPYECNQCGKAFSVRSSLT 29 (46)
T ss_dssp CCCCSSEETTTTEECSSHHHHH
T ss_pred CCCCCeECCCCChhhCCHHHHH
Confidence 4667899999987766655543
No 165
>2cu8_A Cysteine-rich protein 2; CRP2, CRIP2, ESP1 protein, zinc-binding, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=23.55 E-value=21 Score=21.08 Aligned_cols=11 Identities=27% Similarity=0.839 Sum_probs=5.4
Q ss_pred EEeccCCCCCC
Q 039667 11 YSCYRCRNLVS 21 (107)
Q Consensus 11 y~C~~C~thLa 21 (107)
|.|..|+.+|.
T Consensus 37 F~C~~C~~~L~ 47 (76)
T 2cu8_A 37 LKCERCSKTLT 47 (76)
T ss_dssp CBCSSSCCBCC
T ss_pred CCCCCCCCccC
Confidence 44555555444
No 166
>3jyw_Q 60S ribosomal protein L21(A); eukaryotic ribosome, RACK1 protein, flexible fitting; 8.90A {Thermomyces lanuginosus} PDB: 1s1i_Q
Probab=23.53 E-value=21 Score=24.71 Aligned_cols=34 Identities=24% Similarity=0.291 Sum_probs=23.0
Q ss_pred eceeCCCceEEEeec-----ccccccCCc--cceeeceecE
Q 039667 29 KGFQASSGRAFLFSH-----AANIVEGPK--EDQHLLTGLH 62 (107)
Q Consensus 29 k~f~G~~G~AyLf~~-----v~Nv~~g~~--e~r~m~TG~h 62 (107)
+.|+|++|+.|=... ++|...|.+ +.|.-+.-.|
T Consensus 54 k~YHGKTGrV~nvt~~AvgivVnkqv~gKil~KrInVriEH 94 (116)
T 3jyw_Q 54 KFYQGKTGVVYNVTKSSVGVIINKMVGNRYLEKRLNLRVEH 94 (116)
T ss_dssp STTSSCCCBCCCCCSSSSSEEEECCCSSSSCCCEEEECGGG
T ss_pred cccCCCCeEEEeecCcEEEEEEEEEECCeeeeeEEEECHhH
Confidence 689999999886663 677777765 4454443333
No 167
>2eov_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=23.45 E-value=12 Score=19.13 Aligned_cols=22 Identities=18% Similarity=0.540 Sum_probs=16.2
Q ss_pred CCCCeEEeccCCCCCCCCCCee
Q 039667 6 IGPRRYSCYRCRNLVSCHEDIV 27 (107)
Q Consensus 6 ~g~~~y~C~~C~thLa~~~~li 27 (107)
.+.+.|.|..|..-+...+.|.
T Consensus 8 ~~~~~~~C~~C~k~f~~~~~L~ 29 (46)
T 2eov_A 8 TGEKPYKCSDCGKSFTWKSRLR 29 (46)
T ss_dssp SSCCSCBCSSSCCBCSSHHHHH
T ss_pred CCCCCccCCccChhhCCHHHHH
Confidence 4567899999988777665544
No 168
>2eoe_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=23.38 E-value=9.1 Score=19.61 Aligned_cols=22 Identities=18% Similarity=0.647 Sum_probs=15.9
Q ss_pred CCCCeEEeccCCCCCCCCCCee
Q 039667 6 IGPRRYSCYRCRNLVSCHEDIV 27 (107)
Q Consensus 6 ~g~~~y~C~~C~thLa~~~~li 27 (107)
.|.+.|.|..|..-....+.|.
T Consensus 8 ~~~~~~~C~~C~k~F~~~~~L~ 29 (46)
T 2eoe_A 8 TGEKPYKCNECGKVFTQNSHLA 29 (46)
T ss_dssp CCCCSSEETTTTEECSSHHHHH
T ss_pred CCCCCeECCCcChhhCCHHHHH
Confidence 4667899999987766655543
No 169
>2eq1_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=23.35 E-value=12 Score=19.23 Aligned_cols=22 Identities=23% Similarity=0.718 Sum_probs=16.3
Q ss_pred CCCCeEEeccCCCCCCCCCCee
Q 039667 6 IGPRRYSCYRCRNLVSCHEDIV 27 (107)
Q Consensus 6 ~g~~~y~C~~C~thLa~~~~li 27 (107)
.+.+.|.|..|..-....+.|.
T Consensus 8 ~~~k~~~C~~C~k~f~~~~~L~ 29 (46)
T 2eq1_A 8 TGEKPYKCNECGKAFRAHSNLT 29 (46)
T ss_dssp CCSCCCCCTTTTCCCSSHHHHH
T ss_pred CCCCCeECCcCChhhCCHHHHH
Confidence 4667899999988776655543
No 170
>1iml_A CRIP, cysteine rich intestinal protein; metal-binding protein, LIM domain protein; NMR {Rattus rattus} SCOP: g.39.1.3 g.39.1.3
Probab=23.26 E-value=31 Score=20.28 Aligned_cols=25 Identities=12% Similarity=0.448 Sum_probs=16.2
Q ss_pred eEEeccCCCCCCCCCCeeeeceeCCCceEEE
Q 039667 10 RYSCYRCRNLVSCHEDIVSKGFQASSGRAFL 40 (107)
Q Consensus 10 ~y~C~~C~thLa~~~~liSk~f~G~~G~AyL 40 (107)
-|.|..|+.+|.... |..+.|+.|-
T Consensus 27 CF~C~~C~~~L~~~~------~~~~~g~~yC 51 (76)
T 1iml_A 27 CLKCEKCGKTLTSGG------HAEHEGKPYC 51 (76)
T ss_dssp TCBCTTTCCBCCTTT------EEEETTEEEE
T ss_pred CCCccccCccCCCCc------eECcCCeEee
Confidence 478888888887642 3334566554
No 171
>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A
Probab=23.25 E-value=14 Score=19.57 Aligned_cols=21 Identities=19% Similarity=0.445 Sum_probs=14.5
Q ss_pred CCCCeEEeccCCCCCCCCCCe
Q 039667 6 IGPRRYSCYRCRNLVSCHEDI 26 (107)
Q Consensus 6 ~g~~~y~C~~C~thLa~~~~l 26 (107)
.+.+.|.|..|.......+.|
T Consensus 25 ~~~~~~~C~~C~~~f~~~~~l 45 (57)
T 1bbo_A 25 TDVRPYHCTYCNFSFKTKGNL 45 (57)
T ss_dssp SSCCCEECSSSSCEESSHHHH
T ss_pred CCCCCccCCCCCchhcCHHHH
Confidence 355779999998766655444
No 172
>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1
Probab=23.21 E-value=14 Score=19.97 Aligned_cols=22 Identities=18% Similarity=0.309 Sum_probs=15.3
Q ss_pred CCCCeEEeccCCCCCCCCCCee
Q 039667 6 IGPRRYSCYRCRNLVSCHEDIV 27 (107)
Q Consensus 6 ~g~~~y~C~~C~thLa~~~~li 27 (107)
.+.+.|.|..|..-+...+.|.
T Consensus 8 ~~~k~~~C~~C~k~f~~~~~L~ 29 (54)
T 2eps_A 8 SVGKPYICQSCGKGFSRPDHLN 29 (54)
T ss_dssp CSSCCEECSSSCCEESSHHHHH
T ss_pred CCCCCeECCCCCcccCCHHHHH
Confidence 4567899999987666555443
No 173
>1x3h_A Leupaxin; paxillin family, protein-protein interaction, LIM domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=23.09 E-value=34 Score=20.19 Aligned_cols=11 Identities=27% Similarity=0.615 Sum_probs=5.6
Q ss_pred EEeccCCCCCC
Q 039667 11 YSCYRCRNLVS 21 (107)
Q Consensus 11 y~C~~C~thLa 21 (107)
|.|..|+.+|.
T Consensus 42 F~C~~C~~~L~ 52 (80)
T 1x3h_A 42 FVCGDCFTSFS 52 (80)
T ss_dssp CBCSSSCCBSC
T ss_pred CChhhCCCCCC
Confidence 45555555554
No 174
>1g47_A Pinch protein; LIM domain, Zn finger, cell adhesion; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=23.08 E-value=20 Score=21.01 Aligned_cols=16 Identities=38% Similarity=0.708 Sum_probs=8.9
Q ss_pred EeccCCCCCCCCCCee
Q 039667 12 SCYRCRNLVSCHEDIV 27 (107)
Q Consensus 12 ~C~~C~thLa~~~~li 27 (107)
.|..|+.++...+.++
T Consensus 13 ~C~~C~~~I~~~~~~~ 28 (77)
T 1g47_A 13 TCERCKGGFAPAEKIV 28 (77)
T ss_dssp BCSSSCCBCCSTTTCE
T ss_pred CchhcCCccCCCceEE
Confidence 5666666665444443
No 175
>1x6o_A Eukaryotic initiation factor 5A; SGPP, structural genomics, PSI; 1.60A {Leishmania braziliensis} SCOP: b.34.5.2 b.40.4.5 PDB: 1xtd_A
Probab=23.07 E-value=40 Score=24.42 Aligned_cols=32 Identities=16% Similarity=0.144 Sum_probs=23.1
Q ss_pred ceeCCCceEEEeecccccccCCccceeeceec
Q 039667 30 GFQASSGRAFLFSHAANIVEGPKEDQHLLTGL 61 (107)
Q Consensus 30 ~f~G~~G~AyLf~~v~Nv~~g~~e~r~m~TG~ 61 (107)
.=.|++|.|+.--++.|+..|...++..-+|-
T Consensus 57 ~KpGKgG~A~vr~k~kni~TG~k~E~tf~s~~ 88 (174)
T 1x6o_A 57 SKTGKHGHAKVSIVATDIFTGNRLEDQAPSTH 88 (174)
T ss_dssp CCC----CCEEEEEEEETTTCCEEEEEEETTS
T ss_pred cCCCCCCceEEEEEEEECCCCCEEEEEeCCCC
Confidence 34699999999899999999999887776664
No 176
>2eq2_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=23.04 E-value=9.2 Score=19.66 Aligned_cols=22 Identities=23% Similarity=0.576 Sum_probs=16.6
Q ss_pred CCCCeEEeccCCCCCCCCCCee
Q 039667 6 IGPRRYSCYRCRNLVSCHEDIV 27 (107)
Q Consensus 6 ~g~~~y~C~~C~thLa~~~~li 27 (107)
.+.+.|.|..|..-+...+.|.
T Consensus 8 ~~~k~~~C~~C~k~f~~~~~L~ 29 (46)
T 2eq2_A 8 TGGKPYQCNECGKAFSQTSKLA 29 (46)
T ss_dssp SSSCSSSCCSSCCCCSSHHHHH
T ss_pred CCCCCeECCCCCcccCCHHHHH
Confidence 4667899999988777666554
No 177
>2yti_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=22.92 E-value=9.1 Score=19.67 Aligned_cols=22 Identities=18% Similarity=0.647 Sum_probs=16.5
Q ss_pred CCCCeEEeccCCCCCCCCCCee
Q 039667 6 IGPRRYSCYRCRNLVSCHEDIV 27 (107)
Q Consensus 6 ~g~~~y~C~~C~thLa~~~~li 27 (107)
.+.+.|.|..|..-+...+.|.
T Consensus 8 ~~~k~~~C~~C~k~F~~~~~L~ 29 (46)
T 2yti_A 8 TGEKPYKCNECGKVFTQNSHLA 29 (46)
T ss_dssp SCCCTTCCSSSCCCCSSHHHHH
T ss_pred CCCcCeECCCCCcccCChhHHH
Confidence 4667899999988777666553
No 178
>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=22.53 E-value=15 Score=21.00 Aligned_cols=21 Identities=14% Similarity=0.287 Sum_probs=14.5
Q ss_pred CCCCeEEeccCCCCCCCCCCe
Q 039667 6 IGPRRYSCYRCRNLVSCHEDI 26 (107)
Q Consensus 6 ~g~~~y~C~~C~thLa~~~~l 26 (107)
.|.+.|.|..|..-+.....|
T Consensus 3 ~~~k~~~C~~C~k~f~~~~~L 23 (78)
T 2d9h_A 3 SGSSGLQCEICGFTCRQKASL 23 (78)
T ss_dssp CSCCCEECSSSCCEESSHHHH
T ss_pred CCCcCeECCCCCCeeCCHHHH
Confidence 356789999887766655444
No 179
>3sjl_A Methylamine utilization protein MAUG; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 3sle_A* 3svw_A* 3sxt_A* 3l4o_A* 3pxs_A* 3pxt_A* 3pxw_A* 3l4m_A* 3sws_A* 3orv_A* 3rmz_A* 3rlm_A* 3rn0_A* 3rn1_A*
Probab=22.23 E-value=17 Score=29.22 Aligned_cols=30 Identities=23% Similarity=0.294 Sum_probs=16.3
Q ss_pred cCCCCeEEeccCCCC-CCCCCCe-------eeeceeCC
Q 039667 5 LIGPRRYSCYRCRNL-VSCHEDI-------VSKGFQAS 34 (107)
Q Consensus 5 l~g~~~y~C~~C~th-La~~~~l-------iSk~f~G~ 34 (107)
|++....+|+.|+.+ .+..|.+ +|.+..|.
T Consensus 23 LS~~~~iSCaSCH~p~~g~~D~~~~~~~~~~s~G~~g~ 60 (373)
T 3sjl_A 23 LSRNATQSCATCHDPARAFTDPREGKAGLAVSVGDDGQ 60 (373)
T ss_dssp GSTTSCCCHHHHSBGGGTTBCCC---------------
T ss_pred cCCCCCcCchhhCCccccCCCCcccccccccccCCCCC
Confidence 778889999999987 3444433 56666653
No 180
>2eou_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=22.04 E-value=12 Score=19.00 Aligned_cols=22 Identities=9% Similarity=0.332 Sum_probs=16.2
Q ss_pred CCCCeEEeccCCCCCCCCCCee
Q 039667 6 IGPRRYSCYRCRNLVSCHEDIV 27 (107)
Q Consensus 6 ~g~~~y~C~~C~thLa~~~~li 27 (107)
.+.+.|.|..|..-+...+.|.
T Consensus 8 ~~~~~~~C~~C~k~f~~~~~L~ 29 (44)
T 2eou_A 8 AAKTTSECQECGKIFRHSSLLI 29 (44)
T ss_dssp SSSCCCCCTTTCCCCSSHHHHH
T ss_pred CCCcCeECCCCCcccCCHHHHH
Confidence 4567899999988777665543
No 181
>2eoq_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=21.95 E-value=13 Score=19.10 Aligned_cols=22 Identities=14% Similarity=0.415 Sum_probs=16.2
Q ss_pred CCCCeEEeccCCCCCCCCCCee
Q 039667 6 IGPRRYSCYRCRNLVSCHEDIV 27 (107)
Q Consensus 6 ~g~~~y~C~~C~thLa~~~~li 27 (107)
.+.+.|.|..|..-++..+.|.
T Consensus 8 ~~~~~~~C~~C~k~f~~~~~L~ 29 (46)
T 2eoq_A 8 TGEKPFKCDICGKSFCGRSRLN 29 (46)
T ss_dssp SSSCSCCCSSSCCCCSSHHHHH
T ss_pred CCCCCcCCCcCCchhCCHHHHH
Confidence 4667899999988777665543
No 182
>1loi_A Cyclic 3',5'-AMP specific phosphodiesterase RD1; hydrolase, C-AMP phosphodiesterase; NMR {Rattus norvegicus} SCOP: j.51.1.1
Probab=21.85 E-value=12 Score=19.32 Aligned_cols=14 Identities=36% Similarity=1.305 Sum_probs=10.5
Q ss_pred eeeecccCCCc--eee
Q 039667 65 ADVYCADCGEL--LGW 78 (107)
Q Consensus 65 ~DI~C~~C~~~--lGW 78 (107)
.|.+|..|..+ +||
T Consensus 4 vdffcetcskpwlvgw 19 (26)
T 1loi_A 4 VDFFCETCSKPWLVGW 19 (26)
T ss_dssp HHHHHHTSSCTTGGGG
T ss_pred HHHHHHhcCCchhhhh
Confidence 37789999875 566
No 183
>1wig_A KIAA1808 protein; LIM domain, zinc finger, metal-binding protein, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=21.81 E-value=33 Score=20.28 Aligned_cols=11 Identities=27% Similarity=0.788 Sum_probs=7.1
Q ss_pred EEeccCCCCCC
Q 039667 11 YSCYRCRNLVS 21 (107)
Q Consensus 11 y~C~~C~thLa 21 (107)
|.|..|+.+|.
T Consensus 32 F~C~~C~~~L~ 42 (73)
T 1wig_A 32 ALCVRCGQMFA 42 (73)
T ss_dssp SCCSSSCCCCC
T ss_pred CEeCCCCCCCC
Confidence 56666666665
No 184
>1ncs_A Peptide M30F, transcriptional factor SWI5; DNA binding motif, transcription regulation, zinc-finger; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1
Probab=21.67 E-value=43 Score=17.31 Aligned_cols=22 Identities=14% Similarity=0.446 Sum_probs=16.4
Q ss_pred CCCCeEEec--cCCCCCCCCCCee
Q 039667 6 IGPRRYSCY--RCRNLVSCHEDIV 27 (107)
Q Consensus 6 ~g~~~y~C~--~C~thLa~~~~li 27 (107)
.|.++|.|. .|..-+...+.|.
T Consensus 14 ~~~k~~~C~~~~C~k~F~~~~~L~ 37 (47)
T 1ncs_A 14 MPDKTFECLFPGCTKTFKRRYNIR 37 (47)
T ss_dssp ETTTEEECCCTTCCCEECSSSSHH
T ss_pred CCCCCeECCCCCCCCccCCHHHHH
Confidence 467899995 7988777766654
No 185
>1rim_A E6APC2 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1
Probab=21.58 E-value=9.9 Score=18.36 Aligned_cols=18 Identities=11% Similarity=0.506 Sum_probs=12.3
Q ss_pred CeEEeccCCCCCCCCCCe
Q 039667 9 RRYSCYRCRNLVSCHEDI 26 (107)
Q Consensus 9 ~~y~C~~C~thLa~~~~l 26 (107)
++|.|..|..-.+..+.|
T Consensus 1 kp~~C~~C~k~F~~~~~L 18 (33)
T 1rim_A 1 YKFACPECPKRFMRSDHL 18 (33)
T ss_dssp CCCCCSSSCCCCSSHHHH
T ss_pred CcccCCCCCchhCCHHHH
Confidence 357888888776655544
No 186
>1va1_A Transcription factor SP1; C2H2 type zinc finger, DNA-binding protein; NMR {Homo sapiens}
Probab=21.39 E-value=16 Score=17.85 Aligned_cols=21 Identities=10% Similarity=0.240 Sum_probs=14.8
Q ss_pred CCCCeEEec--cCCCCCCCCCCe
Q 039667 6 IGPRRYSCY--RCRNLVSCHEDI 26 (107)
Q Consensus 6 ~g~~~y~C~--~C~thLa~~~~l 26 (107)
.|.+.|.|. .|..-+...+.|
T Consensus 4 ~~~k~~~C~~~~C~k~f~~~~~L 26 (37)
T 1va1_A 4 GKKKQHICHIQGCGKVYGKTSHL 26 (37)
T ss_dssp SSCCCEECCSTTCCCEESCHHHH
T ss_pred CCCCCCCCCCCCCCCccCCHHHH
Confidence 467889998 598766655444
No 187
>2ytm_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=21.36 E-value=11 Score=19.54 Aligned_cols=22 Identities=18% Similarity=0.533 Sum_probs=16.3
Q ss_pred CCCCeEEeccCCCCCCCCCCee
Q 039667 6 IGPRRYSCYRCRNLVSCHEDIV 27 (107)
Q Consensus 6 ~g~~~y~C~~C~thLa~~~~li 27 (107)
.+.+.|.|..|..-+...+.|.
T Consensus 8 ~~~k~~~C~~C~k~f~~~~~L~ 29 (46)
T 2ytm_A 8 TGEKPYKCMECGKAFGDNSSCT 29 (46)
T ss_dssp SSCCSSSBTTTTBCCSSHHHHH
T ss_pred CCCCCcCCCCCCchhCCHHHHH
Confidence 4667899999988777665553
No 188
>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=20.77 E-value=19 Score=20.57 Aligned_cols=22 Identities=23% Similarity=0.600 Sum_probs=15.8
Q ss_pred CCCCeEEeccCCCCCCCCCCee
Q 039667 6 IGPRRYSCYRCRNLVSCHEDIV 27 (107)
Q Consensus 6 ~g~~~y~C~~C~thLa~~~~li 27 (107)
.+.++|.|..|..-+...+.|.
T Consensus 11 ~~~k~~~C~~C~k~f~~~~~L~ 32 (77)
T 2ct1_A 11 SGEKPYECYICHARFTQSGTMK 32 (77)
T ss_dssp SCCCSEECTTTCCEESCHHHHH
T ss_pred CCCCCeECCCcCchhCCHHHHH
Confidence 4667899999987766655543
No 189
>1bhi_A CRE-BP1, ATF-2; CRE binding protein, transcriptional activation domain, Zn finger, DNA-binding regulatory protein; NMR {Homo sapiens} SCOP: g.37.1.1
Probab=20.46 E-value=17 Score=17.61 Aligned_cols=20 Identities=10% Similarity=0.466 Sum_probs=14.0
Q ss_pred CCCeEEec--cCCCCCCCCCCe
Q 039667 7 GPRRYSCY--RCRNLVSCHEDI 26 (107)
Q Consensus 7 g~~~y~C~--~C~thLa~~~~l 26 (107)
|.+.|.|. .|..-....+.|
T Consensus 3 ~~k~~~C~~~~C~k~f~~~~~L 24 (38)
T 1bhi_A 3 DDKPFLCTAPGCGQRFTNEDHL 24 (38)
T ss_dssp TCCCEECCCTTTCCEESSHHHH
T ss_pred CCcceECCCCCCCcccCCHHHH
Confidence 56789998 598766655444
No 190
>2ytr_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=20.31 E-value=11 Score=19.33 Aligned_cols=22 Identities=23% Similarity=0.591 Sum_probs=15.9
Q ss_pred CCCCeEEeccCCCCCCCCCCee
Q 039667 6 IGPRRYSCYRCRNLVSCHEDIV 27 (107)
Q Consensus 6 ~g~~~y~C~~C~thLa~~~~li 27 (107)
.|.+.|.|..|..-+...+.|.
T Consensus 8 ~~~k~~~C~~C~k~f~~~~~L~ 29 (46)
T 2ytr_A 8 TGEKPYKCNECGKAFSQTSKLA 29 (46)
T ss_dssp SSCCTTCCTTTCCCCSSHHHHH
T ss_pred CCCcCcCCCCCCCccCCHHHHH
Confidence 4667899999987776655543
No 191
>2dar_A PDZ and LIM domain protein 5; enigma homolog protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=20.23 E-value=36 Score=20.76 Aligned_cols=9 Identities=22% Similarity=0.958 Sum_probs=5.2
Q ss_pred EeccCCCCC
Q 039667 12 SCYRCRNLV 20 (107)
Q Consensus 12 ~C~~C~thL 20 (107)
.|..|+.++
T Consensus 27 ~C~~C~~~I 35 (90)
T 2dar_A 27 MCAHCNQVI 35 (90)
T ss_dssp BBSSSCCBC
T ss_pred CCccCCCEe
Confidence 455565555
No 192
>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1
Probab=20.22 E-value=25 Score=20.52 Aligned_cols=23 Identities=13% Similarity=0.252 Sum_probs=17.4
Q ss_pred CCCCeEEeccCCCCCCCCCCeee
Q 039667 6 IGPRRYSCYRCRNLVSCHEDIVS 28 (107)
Q Consensus 6 ~g~~~y~C~~C~thLa~~~~liS 28 (107)
.|.+.|.|..|...+.....|..
T Consensus 3 ~~~~~~~C~~C~~~f~~~~~l~~ 25 (95)
T 2yt9_A 3 SGSSGVACEICGKIFRDVYHLNR 25 (95)
T ss_dssp CCCSCEECSSSCCEESSSHHHHH
T ss_pred CCCCCeECCCCCCccCChHHHHH
Confidence 45678999999988877766543
No 193
>1x63_A Skeletal muscle LIM-protein 1; LIM domain, four and A half LIM domains protein 1, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=20.21 E-value=37 Score=20.10 Aligned_cols=16 Identities=19% Similarity=0.455 Sum_probs=9.1
Q ss_pred EeccCCCCCCCCCCee
Q 039667 12 SCYRCRNLVSCHEDIV 27 (107)
Q Consensus 12 ~C~~C~thLa~~~~li 27 (107)
.|..|+.++...+.+|
T Consensus 17 ~C~~C~~~I~~~~~~~ 32 (82)
T 1x63_A 17 KCKGCFKAIVAGDQNV 32 (82)
T ss_dssp BCSSSCCBCCSSSCEE
T ss_pred cCccCCcccccCceEE
Confidence 5666666665544444
No 194
>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=20.18 E-value=18 Score=20.25 Aligned_cols=22 Identities=14% Similarity=0.234 Sum_probs=15.3
Q ss_pred CCCCeEEeccCCCCCCCCCCee
Q 039667 6 IGPRRYSCYRCRNLVSCHEDIV 27 (107)
Q Consensus 6 ~g~~~y~C~~C~thLa~~~~li 27 (107)
.+.+.|.|..|..-+.....|.
T Consensus 5 ~~~~~~~C~~C~k~f~~~~~L~ 26 (70)
T 1x5w_A 5 SSGHPEKCSECSYSCSSKAALR 26 (70)
T ss_dssp CCCCSEECSSSSCEESSHHHHH
T ss_pred CCCCCeECCCCCcccCCHHHHH
Confidence 3567899999987666655543
No 195
>1x4k_A Skeletal muscle LIM-protein 3; LIM domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=20.12 E-value=31 Score=19.90 Aligned_cols=16 Identities=13% Similarity=0.430 Sum_probs=7.5
Q ss_pred EeccCCCCCCCCCCee
Q 039667 12 SCYRCRNLVSCHEDIV 27 (107)
Q Consensus 12 ~C~~C~thLa~~~~li 27 (107)
.|..|+.++...+.+|
T Consensus 7 ~C~~C~~~I~~~~~~~ 22 (72)
T 1x4k_A 7 GCQECKKTIMPGTRKM 22 (72)
T ss_dssp CBSSSCCCCCSSSCEE
T ss_pred CCccCCCcccCCceEE
Confidence 3555555555443333
Done!