BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 039671
(195 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|2ZSH|A Chain A, Structural Basis Of Gibberellin(Ga3)-Induced Della
Recognition By The Gibberellin Receptor
pdb|2ZSI|A Chain A, Structural Basis Of Gibberellin(Ga4)-Induced Della
Recognition By The Gibberellin Receptor
Length = 351
Score = 82.0 bits (201), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 91/210 (43%), Gaps = 30/210 (14%)
Query: 1 VSVEYGLFPDRPIPACYEDSWAALNWVASHAGGNGPEPWLNDHADFG-RVFIGGGSAGGN 59
VSV Y P+ P P Y+D W ALNWV S + WL D +F+ G S+GGN
Sbjct: 150 VSVNYRRAPENPYPCAYDDGWIALNWVNSRS-------WLKSKKDSKVHIFLAGDSSGGN 202
Query: 60 IAHTLAFQVGSIGLPRVKLVGVIMVHPFFGGTSPEEDE----------------MWLYMC 103
IAH +A + G G + ++G I+++P FGG E E W
Sbjct: 203 IAHNVALRAGESG---IDVLGNILLNPMFGGNERTESEKSLDGKYFVTVRDRDWYWKAFL 259
Query: 104 PTNGGLQDPR---LKPPAEDLARLGCERVLIFVAEKDFLKPVAMNYYEDLKKSGWKGTVE 160
P + P P + L + + L+ VA D ++ + Y E LKK+G + +
Sbjct: 260 PEGEDREHPACNPFSPRGKSLEGVSFPKSLVVVAGLDLIRDWQLAYAEGLKKAGQEVKLM 319
Query: 161 LVETHGEGHSFYFDNLKCEKAVELINKFVS 190
+E G +N ++ I+ FV+
Sbjct: 320 HLEKATVGFYLLPNNNHFHNVMDEISAFVN 349
>pdb|3EBL|A Chain A, Crystal Structure Of Rice Gid1 Complexed With Ga4
pdb|3EBL|B Chain B, Crystal Structure Of Rice Gid1 Complexed With Ga4
pdb|3EBL|C Chain C, Crystal Structure Of Rice Gid1 Complexed With Ga4
pdb|3EBL|D Chain D, Crystal Structure Of Rice Gid1 Complexed With Ga4
pdb|3EBL|E Chain E, Crystal Structure Of Rice Gid1 Complexed With Ga4
pdb|3EBL|F Chain F, Crystal Structure Of Rice Gid1 Complexed With Ga4
pdb|3ED1|A Chain A, Crystal Structure Of Rice Gid1 Complexed With Ga3
pdb|3ED1|B Chain B, Crystal Structure Of Rice Gid1 Complexed With Ga3
pdb|3ED1|C Chain C, Crystal Structure Of Rice Gid1 Complexed With Ga3
pdb|3ED1|D Chain D, Crystal Structure Of Rice Gid1 Complexed With Ga3
pdb|3ED1|E Chain E, Crystal Structure Of Rice Gid1 Complexed With Ga3
pdb|3ED1|F Chain F, Crystal Structure Of Rice Gid1 Complexed With Ga3
Length = 365
Score = 72.4 bits (176), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 87/210 (41%), Gaps = 30/210 (14%)
Query: 1 VSVEYGLFPDRPIPACYEDSWAALNWVASHAGGNGPEPWLNDHADF-GRVFIGGGSAGGN 59
VSV Y P+ P Y+D W AL WV S +P++ D RVF+ G S+GGN
Sbjct: 149 VSVNYRRAPEHRYPCAYDDGWTALKWVMS-------QPFMRSGGDAQARVFLSGDSSGGN 201
Query: 60 IAHTLAFQVGSIGLPRVKLVGVIMVHPFFGGTSPEEDEM----------------WLYMC 103
IAH +A + G VK+ G I+++ FGGT E E W
Sbjct: 202 IAHHVAVRAADEG---VKVCGNILLNAMFGGTERTESERRLDGKYFVTLQDRDWYWKAYL 258
Query: 104 PTNGGLQDPRLKPPAEDLARLG---CERVLIFVAEKDFLKPVAMNYYEDLKKSGWKGTVE 160
P + P P + RLG + LI V+ D + Y + L++ G V
Sbjct: 259 PEDADRDHPACNPFGPNGRRLGGLPFAKSLIIVSGLDLTCDRQLAYADALREDGHHVKVV 318
Query: 161 LVETHGEGHSFYFDNLKCEKAVELINKFVS 190
E G + + + +E I+ F++
Sbjct: 319 QCENATVGFYLLPNTVHYHEVMEEISDFLN 348
>pdb|2O7R|A Chain A, Plant Carboxylesterase Aecxe1 From Actinidia Eriantha With
Acyl Adduct
pdb|2O7V|A Chain A, Carboxylesterase Aecxe1 From Actinidia Eriantha Covalently
Inhibited By Paraoxon
Length = 338
Score = 67.4 bits (163), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 53/174 (30%), Positives = 84/174 (48%), Gaps = 26/174 (14%)
Query: 2 SVEYGLFPDRPIPACYEDSWAALNWVASHAGGNGPEPWLNDHADFGRVFIGGGSAGGNIA 61
SV+Y L P+ +PA Y+D+ AL W+ + + WL + ADF FI G SAGGNIA
Sbjct: 121 SVDYRLAPEHRLPAAYDDAMEALQWIK-----DSRDEWLTNFADFSNCFIMGESAGGNIA 175
Query: 62 HTLAFQVGSIG--LPRVKLVGVIMVHPFFGGTSPEEDEMWLYMCPTNGGLQDPRLKPPAE 119
+ + ++ L +K+ G+++ P FGG+ E+ L D RL
Sbjct: 176 YHAGLRAAAVADELLPLKIKGLVLDEPGFGGSKRTGSELRLA--------NDSRLPTFVL 227
Query: 120 DLARLGCERVLIFVAEKD--FLKPVA----MNYYEDLKKSGWKGTVELVETHGE 167
DL E L A++D + P A + ++ ++ GW+ V +V HG+
Sbjct: 228 DLI---WELSLPMGADRDHEYCNPTAESEPLYSFDKIRSLGWR--VMVVGCHGD 276
>pdb|1QZ3|A Chain A, Crystal Structure Of Mutant M211sR215L OF CARBOXYLESTERASE
Est2 Complexed With Hexadecanesulfonate
pdb|1U4N|A Chain A, Crystal Structure Analysis Of The M211sR215L EST2 MUTANT
Length = 310
Score = 51.2 bits (121), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 55/191 (28%), Positives = 79/191 (41%), Gaps = 31/191 (16%)
Query: 2 SVEYGLFPDRPIPACYEDSWAALNWVASHAGGNGPEPWLNDHADFGRVFIGGGSAGGNIA 61
SV+Y L P+ PA ED++ AL W+A A + H D R+ +GG SAGGN+A
Sbjct: 110 SVDYRLAPEHKFPAAVEDAYDALQWIAERAA--------DFHLDPARIAVGGDSAGGNLA 161
Query: 62 HTLAFQVGSIGLPRVKLVGVIMVHPFFG------GTSPEED----------EMWLYMCPT 105
+ G P L ++++P G S EE+ +W
Sbjct: 162 AVTSILAKERGGP--ALAFQLLIYPSTGYDPAHPPASIEENAEGYLLTGGMSLWFLDQYL 219
Query: 106 NG--GLQDPRLKPPA-EDLARLGCERVLIFVAEKDFLKPVAMNYYEDLKKSGWKGTVELV 162
N L P P DL+ G I A+ D L+ V Y E L K+G K +E
Sbjct: 220 NSLEELTHPWFSPVLYPDLS--GLPPAYIATAQYDPLRDVGKLYAEALNKAGVKVEIENF 277
Query: 163 ETHGEGHSFYF 173
E G + ++
Sbjct: 278 EDLIHGFAQFY 288
>pdb|1EVQ|A Chain A, The Crystal Structure Of The Thermophilic Carboxylesterase
Est2 From Alicyclobacillus Acidocaldarius
Length = 310
Score = 50.8 bits (120), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 53/191 (27%), Positives = 78/191 (40%), Gaps = 31/191 (16%)
Query: 2 SVEYGLFPDRPIPACYEDSWAALNWVASHAGGNGPEPWLNDHADFGRVFIGGGSAGGNIA 61
SV+Y L P+ PA ED++ AL W+A A + H D R+ +GG SAGGN+A
Sbjct: 110 SVDYRLAPEHKFPAAVEDAYDALQWIAERAA--------DFHLDPARIAVGGDSAGGNLA 161
Query: 62 HTLAFQVGSIGLPRVKLVGVIMVHPFFG-------GTSPEEDEMWLYMCPTNGGLQDPRL 114
+ G P L ++++P G + E E +L +D L
Sbjct: 162 AVTSILAKERGGP--ALAFQLLIYPSTGYDPAHPPASIEENAEGYLLTGGXXLWFRDQYL 219
Query: 115 KPPAE------------DLARLGCERVLIFVAEKDFLKPVAMNYYEDLKKSGWKGTVELV 162
E DL+ G I A+ D L+ V Y E L K+G K +E
Sbjct: 220 NSLEELTHPWFSPVLYPDLS--GLPPAYIATAQYDPLRDVGKLYAEALNKAGVKVEIENF 277
Query: 163 ETHGEGHSFYF 173
E G + ++
Sbjct: 278 EDLIHGFAQFY 288
>pdb|2HM7|A Chain A, Crystal Structure Analysis Of The G84s Est2 Mutant
Length = 310
Score = 50.8 bits (120), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 55/191 (28%), Positives = 79/191 (41%), Gaps = 31/191 (16%)
Query: 2 SVEYGLFPDRPIPACYEDSWAALNWVASHAGGNGPEPWLNDHADFGRVFIGGGSAGGNIA 61
SV+Y L P+ PA ED++ AL W+A A + H D R+ +GG SAGGN+A
Sbjct: 110 SVDYRLAPEHKFPAAVEDAYDALQWIAERAA--------DFHLDPARIAVGGDSAGGNLA 161
Query: 62 HTLAFQVGSIGLPRVKLVGVIMVHPFFG------GTSPEEDE----------MWLYMCPT 105
+ G P L ++++P G S EE+ +W
Sbjct: 162 AVTSILAKERGGP--ALAFQLLIYPSTGYDPAHPPASIEENAEGYLLTGGMMLWFRDQYL 219
Query: 106 NG--GLQDPRLKPPA-EDLARLGCERVLIFVAEKDFLKPVAMNYYEDLKKSGWKGTVELV 162
N L P P DL+ G I A+ D L+ V Y E L K+G K +E
Sbjct: 220 NSLEELTHPWFSPVLYPDLS--GLPPAYIATAQYDPLRDVGKLYAEALNKAGVKVEIENF 277
Query: 163 ETHGEGHSFYF 173
E G + ++
Sbjct: 278 EDLIHGFAQFY 288
>pdb|2C7B|A Chain A, The Crystal Structure Of Este1, A New Thermophilic And
Thermostable Carboxylesterase Cloned From A Metagenomic
Library
pdb|2C7B|B Chain B, The Crystal Structure Of Este1, A New Thermophilic And
Thermostable Carboxylesterase Cloned From A Metagenomic
Library
Length = 311
Score = 48.9 bits (115), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 46/91 (50%), Gaps = 10/91 (10%)
Query: 1 VSVEYGLFPDRPIPACYEDSWAALNWVASHAGGNGPEPWLNDHADFGRVFIGGGSAGGNI 60
VSV+Y L P+ P ED++AAL WVA A G +P R+ + G SAGGN+
Sbjct: 108 VSVDYRLAPEYKFPTAVEDAYAALKWVADRADELGVDP--------DRIAVAGDSAGGNL 159
Query: 61 AHTLAFQVGSIGLPRVKLVGVIMVHPFFGGT 91
A ++ + G VK ++++P T
Sbjct: 160 AAVVSILDRNSGEKLVK--KQVLIYPVVNXT 188
>pdb|1JJI|A Chain A, The Crystal Structure Of A Hyper-Thermophilic
Carboxylesterase From The Archaeon Archaeoglobus
Fulgidus
pdb|1JJI|B Chain B, The Crystal Structure Of A Hyper-Thermophilic
Carboxylesterase From The Archaeon Archaeoglobus
Fulgidus
pdb|1JJI|C Chain C, The Crystal Structure Of A Hyper-Thermophilic
Carboxylesterase From The Archaeon Archaeoglobus
Fulgidus
pdb|1JJI|D Chain D, The Crystal Structure Of A Hyper-Thermophilic
Carboxylesterase From The Archaeon Archaeoglobus
Fulgidus
Length = 311
Score = 48.5 bits (114), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/212 (24%), Positives = 89/212 (41%), Gaps = 35/212 (16%)
Query: 1 VSVEYGLFPDRPIPACYEDSWAALNWVASHAGGNGPEPWLNDHADFGRVFIGGGSAGGNI 60
VSV+Y L P+ PA D + A WVA +A +P ++F+GG SAGGN+
Sbjct: 114 VSVDYRLAPEHKFPAAVYDCYDATKWVAENAEELRIDP--------SKIFVGGDSAGGNL 165
Query: 61 AHTLAFQVGSIGLPRVKLVGVIMVHPFFGGTSPE-------------EDEMWLYMCPTNG 107
A ++ G +K I+++P +P + ++ +
Sbjct: 166 AAAVSIMARDSGEDFIK--HQILIYPVVNFVAPTPSLLEFGEGLWILDQKIMSWFSEQYF 223
Query: 108 GLQDPRLKPPAE----DLARLGCERVLIFVAEKDFLKPVAMNYYEDLKKSGWKGTVELVE 163
++ + P A DL L LI AE D L+ + + L+++G + ++ V
Sbjct: 224 SREEDKFNPLASVIFADLENLPP--ALIITAEYDPLRDEGEVFGQMLRRAGVEASI--VR 279
Query: 164 THGEGHSF--YFDNLKCEKAVELINKFVSFIT 193
G H F Y+ LK A + IN+ + +
Sbjct: 280 YRGVLHGFINYYPVLKA--ARDAINQIAALLV 309
>pdb|2YH2|A Chain A, Pyrobaculum Calidifontis Esterase Monoclinic Form
pdb|2YH2|B Chain B, Pyrobaculum Calidifontis Esterase Monoclinic Form
pdb|2YH2|C Chain C, Pyrobaculum Calidifontis Esterase Monoclinic Form
pdb|2YH2|D Chain D, Pyrobaculum Calidifontis Esterase Monoclinic Form
pdb|3ZWQ|A Chain A, Hyperthermophilic Esterase From The Archeon Pyrobaculum
Calidifontis
pdb|3ZWQ|B Chain B, Hyperthermophilic Esterase From The Archeon Pyrobaculum
Calidifontis
Length = 313
Score = 45.1 bits (105), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 42/86 (48%), Gaps = 10/86 (11%)
Query: 1 VSVEYGLFPDRPIPACYEDSWAALNWVASHAGGNGPEPWLNDHADFGRVFIGGGSAGGNI 60
VSV+Y L P+ PA ED++ A WVA + G D G++ + G SAGGN+
Sbjct: 111 VSVDYRLAPEHKFPAAVEDAYDAAKWVADNYDKLG--------VDNGKIAVAGDSAGGNL 162
Query: 61 AHTLAFQVGSIGLPRVKLVGVIMVHP 86
A A G VK ++++P
Sbjct: 163 AAVTAIMARDRGESFVKY--QVLIYP 186
>pdb|3AIM|A Chain A, R267e Mutant Of A Hsl-Like Carboxylesterase From
Sulfolobus Tokodaii
pdb|3AIM|B Chain B, R267e Mutant Of A Hsl-Like Carboxylesterase From
Sulfolobus Tokodaii
pdb|3AIM|C Chain C, R267e Mutant Of A Hsl-Like Carboxylesterase From
Sulfolobus Tokodaii
pdb|3AIM|D Chain D, R267e Mutant Of A Hsl-Like Carboxylesterase From
Sulfolobus Tokodaii
Length = 323
Score = 41.2 bits (95), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 53/187 (28%), Positives = 73/187 (39%), Gaps = 32/187 (17%)
Query: 1 VSVEYGLFPDRPIPACYEDSWAALNWVASHAGGNGPEPWLNDHADFGRVFIGGGSAGGNI 60
+SV+Y L P+ PA DS+ AL WV N E + + +G + +GG SAGGN+
Sbjct: 125 ISVDYRLAPENKFPAAVVDSFDALKWVY-----NNSEKF---NGKYG-IAVGGDSAGGNL 175
Query: 61 AHTLAFQVGSIGLPRVKLVGVIMVHPF----------------FGGTSPEEDEMWLYMCP 104
A A +KL ++++P F T D
Sbjct: 176 AAVTAILSKK---ENIKLKYQVLIYPAVSFDLITKSLYDNGEGFFLTREHIDWFGQQYLR 232
Query: 105 TNGGLQDPRLKPPAEDLARLGCERVLIFVAEKDFLKPVAMNYYEDLKKSGWKGTVELVET 164
+ L D R P DL L LI AE D L+ Y L +SG + V VE
Sbjct: 233 SFADLLDFRFSPILADLNDL--PPALIITAEHDPLRDQGEAYANKLLQSGVQ--VTSVEF 288
Query: 165 HGEGHSF 171
+ H F
Sbjct: 289 NNVIHGF 295
>pdb|3AIK|A Chain A, Crystal Structure Of A Hsl-Like Carboxylesterase From
Sulfolobus Tokodaii
pdb|3AIK|B Chain B, Crystal Structure Of A Hsl-Like Carboxylesterase From
Sulfolobus Tokodaii
pdb|3AIK|C Chain C, Crystal Structure Of A Hsl-Like Carboxylesterase From
Sulfolobus Tokodaii
pdb|3AIK|D Chain D, Crystal Structure Of A Hsl-Like Carboxylesterase From
Sulfolobus Tokodaii
pdb|3AIL|A Chain A, Crystal Structure Of A Hsl-Like Carboxylesterase From
Sulfolobus Tokodaii Complexed With Paraoxon
pdb|3AIL|B Chain B, Crystal Structure Of A Hsl-Like Carboxylesterase From
Sulfolobus Tokodaii Complexed With Paraoxon
pdb|3AIL|C Chain C, Crystal Structure Of A Hsl-Like Carboxylesterase From
Sulfolobus Tokodaii Complexed With Paraoxon
pdb|3AIL|D Chain D, Crystal Structure Of A Hsl-Like Carboxylesterase From
Sulfolobus Tokodaii Complexed With Paraoxon
Length = 323
Score = 41.2 bits (95), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 49/174 (28%), Positives = 68/174 (39%), Gaps = 30/174 (17%)
Query: 1 VSVEYGLFPDRPIPACYEDSWAALNWVASHAGGNGPEPWLNDHADFGRVFIGGGSAGGNI 60
+SV+Y L P+ PA DS+ AL WV N E + + +G + +GG SAGGN+
Sbjct: 125 ISVDYRLAPENKFPAAVVDSFDALKWVY-----NNSEKF---NGKYG-IAVGGDSAGGNL 175
Query: 61 AHTLAFQVGSIGLPRVKLVGVIMVHPF----------------FGGTSPEEDEMWLYMCP 104
A A +KL ++++P F T D
Sbjct: 176 AAVTAILSKK---ENIKLKYQVLIYPAVSFDLITKSLYDNGEGFFLTREHIDWFGQQYLR 232
Query: 105 TNGGLQDPRLKPPAEDLARLGCERVLIFVAEKDFLKPVAMNYYEDLKKSGWKGT 158
+ L D R P DL L LI AE D L+ Y L +SG + T
Sbjct: 233 SFADLLDFRFSPILADLNDL--PPALIITAEHDPLRDQGEAYANKLLQSGVQVT 284
>pdb|3AIO|A Chain A, R267k Mutant Of A Hsl-Like Carboxylesterase From
Sulfolobus Tokodaii
pdb|3AIO|B Chain B, R267k Mutant Of A Hsl-Like Carboxylesterase From
Sulfolobus Tokodaii
pdb|3AIO|C Chain C, R267k Mutant Of A Hsl-Like Carboxylesterase From
Sulfolobus Tokodaii
pdb|3AIO|D Chain D, R267k Mutant Of A Hsl-Like Carboxylesterase From
Sulfolobus Tokodaii
Length = 323
Score = 41.2 bits (95), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 49/174 (28%), Positives = 68/174 (39%), Gaps = 30/174 (17%)
Query: 1 VSVEYGLFPDRPIPACYEDSWAALNWVASHAGGNGPEPWLNDHADFGRVFIGGGSAGGNI 60
+SV+Y L P+ PA DS+ AL WV N E + + +G + +GG SAGGN+
Sbjct: 125 ISVDYRLAPENKFPAAVVDSFDALKWVY-----NNSEKF---NGKYG-IAVGGDSAGGNL 175
Query: 61 AHTLAFQVGSIGLPRVKLVGVIMVHPF----------------FGGTSPEEDEMWLYMCP 104
A A +KL ++++P F T D
Sbjct: 176 AAVTAILSKK---ENIKLKYQVLIYPAVSFDLITKSLYDNGEGFFLTREHIDWFGQQYLR 232
Query: 105 TNGGLQDPRLKPPAEDLARLGCERVLIFVAEKDFLKPVAMNYYEDLKKSGWKGT 158
+ L D R P DL L LI AE D L+ Y L +SG + T
Sbjct: 233 SFADLLDFRFSPILADLNDL--PPALIITAEHDPLRDQGEAYANKLLQSGVQVT 284
>pdb|3AIN|A Chain A, R267g Mutant Of A Hsl-Like Carboxylesterase From
Sulfolobus Tokodaii
pdb|3AIN|B Chain B, R267g Mutant Of A Hsl-Like Carboxylesterase From
Sulfolobus Tokodaii
pdb|3AIN|C Chain C, R267g Mutant Of A Hsl-Like Carboxylesterase From
Sulfolobus Tokodaii
pdb|3AIN|D Chain D, R267g Mutant Of A Hsl-Like Carboxylesterase From
Sulfolobus Tokodaii
Length = 323
Score = 40.8 bits (94), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 49/174 (28%), Positives = 68/174 (39%), Gaps = 30/174 (17%)
Query: 1 VSVEYGLFPDRPIPACYEDSWAALNWVASHAGGNGPEPWLNDHADFGRVFIGGGSAGGNI 60
+SV+Y L P+ PA DS+ AL WV N E + + +G + +GG SAGGN+
Sbjct: 125 ISVDYRLAPENKFPAAVVDSFDALKWVY-----NNSEKF---NGKYG-IAVGGDSAGGNL 175
Query: 61 AHTLAFQVGSIGLPRVKLVGVIMVHPF----------------FGGTSPEEDEMWLYMCP 104
A A +KL ++++P F T D
Sbjct: 176 AAVTAILSKK---ENIKLKYQVLIYPAVSFDLITKSLYDNGEGFFLTREHIDWFGQQYLR 232
Query: 105 TNGGLQDPRLKPPAEDLARLGCERVLIFVAEKDFLKPVAMNYYEDLKKSGWKGT 158
+ L D R P DL L LI AE D L+ Y L +SG + T
Sbjct: 233 SFADLLDFRFSPILADLNDL--PPALIITAEHDPLRDQGEAYANKLLQSGVQVT 284
>pdb|3K6K|A Chain A, Crystal Structure At 2.2 Angstrom Of Hsl-Homolog Este7
From A Metagenome Library
pdb|3K6K|B Chain B, Crystal Structure At 2.2 Angstrom Of Hsl-Homolog Este7
From A Metagenome Library
pdb|3K6K|C Chain C, Crystal Structure At 2.2 Angstrom Of Hsl-Homolog Este7
From A Metagenome Library
pdb|3K6K|D Chain D, Crystal Structure At 2.2 Angstrom Of Hsl-Homolog Este7
From A Metagenome Library
Length = 322
Score = 40.0 bits (92), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 39/86 (45%), Gaps = 14/86 (16%)
Query: 2 SVEYGLFPDRPIPACYEDSWAALNWVASHAGGNGPEPWLNDHADFGRVFIGGGSAGGNIA 61
S++Y L P+ P PA +D AA + AG AD R+ I G SAGG +
Sbjct: 116 SLDYRLAPENPFPAAVDDCVAAYRALLKTAGS----------AD--RIIIAGDSAGGGLT 163
Query: 62 HTLAFQVGSIGLPRVKLVGVIMVHPF 87
+ GLP G++M+ PF
Sbjct: 164 TASMLKAKEDGLPMP--AGLVMLSPF 187
>pdb|3DNM|A Chain A, Crystal Structure Hormone-Sensitive Lipase From A
Metagenome Library
pdb|3DNM|B Chain B, Crystal Structure Hormone-Sensitive Lipase From A
Metagenome Library
pdb|3DNM|C Chain C, Crystal Structure Hormone-Sensitive Lipase From A
Metagenome Library
pdb|3DNM|D Chain D, Crystal Structure Hormone-Sensitive Lipase From A
Metagenome Library
Length = 336
Score = 40.0 bits (92), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 39/86 (45%), Gaps = 14/86 (16%)
Query: 2 SVEYGLFPDRPIPACYEDSWAALNWVASHAGGNGPEPWLNDHADFGRVFIGGGSAGGNIA 61
S++Y L P+ P PA +D AA + AG AD R+ I G SAGG +
Sbjct: 130 SLDYRLAPENPFPAAVDDCVAAYRALLKTAG----------SAD--RIIIAGDSAGGGLT 177
Query: 62 HTLAFQVGSIGLPRVKLVGVIMVHPF 87
+ GLP G++M+ PF
Sbjct: 178 TASMLKAKEDGLPMP--AGLVMLSPF 201
>pdb|3C6B|A Chain A, Reaction Product Of Paraoxon And S-Formylglutathione
Hydrolase W197i Mutant
pdb|4FLM|A Chain A, S-Formylglutathione Hydrolase W197i Variant Containing
Copper
pdb|4FLM|B Chain B, S-Formylglutathione Hydrolase W197i Variant Containing
Copper
Length = 299
Score = 37.4 bits (85), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 34/60 (56%), Gaps = 7/60 (11%)
Query: 119 EDLARLGCERVLIFVAEKD-----FLKPVAMNYYEDLKKSGWKGTVELVETHGEGHSFYF 173
+++ +G +R+LI V + D LKP + E +K + W+ VE+ + HG HS+YF
Sbjct: 223 KNIRHVGDDRILIHVGDSDPFLEEHLKPELL--LEAVKATSWQDYVEIKKVHGFDHSYYF 280
>pdb|1PV1|A Chain A, Crystal Structure Analysis Of Yeast Hypothetical Protein:
Yjg8_yeast
pdb|1PV1|B Chain B, Crystal Structure Analysis Of Yeast Hypothetical Protein:
Yjg8_yeast
pdb|1PV1|C Chain C, Crystal Structure Analysis Of Yeast Hypothetical Protein:
Yjg8_yeast
pdb|1PV1|D Chain D, Crystal Structure Analysis Of Yeast Hypothetical Protein:
Yjg8_yeast
Length = 299
Score = 37.0 bits (84), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 34/60 (56%), Gaps = 7/60 (11%)
Query: 119 EDLARLGCERVLIFVAEKD-----FLKPVAMNYYEDLKKSGWKGTVELVETHGEGHSFYF 173
+++ +G +R+LI V + D LKP + E +K + W+ VE+ + HG HS+YF
Sbjct: 223 KNIRHVGDDRILIHVGDSDPFLEEHLKPELL--LEAVKATSWQDYVEIKKVHGFDHSYYF 280
>pdb|4FOL|A Chain A, S-Formylglutathione Hydrolase Variant H160i
pdb|4FOL|B Chain B, S-Formylglutathione Hydrolase Variant H160i
pdb|4FOL|C Chain C, S-Formylglutathione Hydrolase Variant H160i
pdb|4FOL|D Chain D, S-Formylglutathione Hydrolase Variant H160i
Length = 299
Score = 37.0 bits (84), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 34/60 (56%), Gaps = 7/60 (11%)
Query: 119 EDLARLGCERVLIFVAEKD-----FLKPVAMNYYEDLKKSGWKGTVELVETHGEGHSFYF 173
+++ +G +R+LI V + D LKP + E +K + W+ VE+ + HG HS+YF
Sbjct: 223 KNIRHVGDDRILIHVGDSDPFLEEHLKPELL--LEAVKATSWQDYVEIKKVHGFDHSYYF 280
>pdb|1LZL|A Chain A, Bacterial Heroin Esterase
Length = 323
Score = 37.0 bits (84), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 32/60 (53%), Gaps = 8/60 (13%)
Query: 2 SVEYGLFPDRPIPACYEDSWAALNWVASHAGGNGPEPWLNDHADFGRVFIGGGSAGGNIA 61
+VEY L P+ P D +AAL ++ +HA G +P R+ +GG SAGG +A
Sbjct: 115 NVEYRLAPETTFPGPVNDCYAALLYIHAHAEELGIDP--------SRIAVGGQSAGGGLA 166
>pdb|1LZK|A Chain A, Bacterial Heroin Esterase Complex With Transition State
Analog Dimethylarsenic Acid
Length = 323
Score = 36.6 bits (83), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 32/60 (53%), Gaps = 8/60 (13%)
Query: 2 SVEYGLFPDRPIPACYEDSWAALNWVASHAGGNGPEPWLNDHADFGRVFIGGGSAGGNIA 61
+VEY L P+ P D +AAL ++ +HA G +P R+ +GG SAGG +A
Sbjct: 115 NVEYRLAPETTFPGPVNDCYAALLYIHAHAEELGIDP--------SRIAVGGQSAGGGLA 166
>pdb|3V9A|A Chain A, Crystal Structure Of EsteraseLIPASE FROM UNCULTURED
BACTERIUM
Length = 309
Score = 31.2 bits (69), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 30/72 (41%), Gaps = 12/72 (16%)
Query: 3 VEYGLFPDRPIPACYEDSWAALNWVASHAGGNGPEPWLNDHADFGRVFIGGGSAGGNIAH 62
++Y L P+ P PA ED AA W+ G P+ + I G SAGG +
Sbjct: 104 LDYRLAPEHPFPAAVEDGVAAYRWLLDQ--GFKPQ----------HLSISGDSAGGGLVL 151
Query: 63 TLAFQVGSIGLP 74
+ GLP
Sbjct: 152 AVLVSARDQGLP 163
>pdb|3QH4|A Chain A, Crystal Structure Of Esterase Lipw From Mycobacterium
Marinum
Length = 317
Score = 31.2 bits (69), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 14/31 (45%), Positives = 18/31 (58%)
Query: 1 VSVEYGLFPDRPIPACYEDSWAALNWVASHA 31
VSV+Y L P+ P PA D+ L WV +A
Sbjct: 120 VSVDYRLAPEHPYPAALHDAIEVLTWVVGNA 150
>pdb|3FAK|A Chain A, Structural And Functional Analysis Of A Hormone-Sensitive
Lipase Like Este5 From A Metagenome Library
pdb|3G9T|A Chain A, Crystal Structure Of Este5, Was Soaked By P-Nitrophenyl
Butyrate For 5sec
pdb|3G9U|A Chain A, Crystal Structure Of Este5, Was Soaked By P-nitrophenyl
Butyrate For 5min
pdb|3G9Z|A Chain A, Crystal Structure Of Este5, Was Soaked By P-Nitrophenyl
Caprylate
pdb|3H17|A Chain A, Crystal Structure Of Este5-Pmsf (I)
pdb|3H18|A Chain A, Crystal Structure Of Este5-pmsf (ii)
pdb|3H19|A Chain A, Crystal Structure Of Este5, Was Soaked By Methyl Alcohol
pdb|3H1A|A Chain A, Crystal Structure Of Este5, Was Soaked By Ethyl Alcohol
pdb|3H1B|A Chain A, Crystal Structure Of Este5, Was Soaked By Isopropyl
Alcohol
pdb|3L1H|A Chain A, Crystal Structure Of Este5, Was Soaked By Fecl3
pdb|3L1I|A Chain A, Crystal Structure Of Este5, Was Soaked By Cuso4
pdb|3L1J|A Chain A, Crystal Structure Of Este5, Was Soaked By Znso4
Length = 322
Score = 31.2 bits (69), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 30/72 (41%), Gaps = 12/72 (16%)
Query: 3 VEYGLFPDRPIPACYEDSWAALNWVASHAGGNGPEPWLNDHADFGRVFIGGGSAGGNIAH 62
++Y L P+ P PA ED AA W+ G P+ + I G SAGG +
Sbjct: 117 LDYRLAPEHPFPAAVEDGVAAYRWLLDQ--GFKPQ----------HLSISGDSAGGGLVL 164
Query: 63 TLAFQVGSIGLP 74
+ GLP
Sbjct: 165 AVLVSARDQGLP 176
>pdb|2I2X|A Chain A, Crystal Structure Of Methanol:cobalamin Methyltransferase
Complex Mtabc From Methanosarcina Barkeri
pdb|2I2X|C Chain C, Crystal Structure Of Methanol:cobalamin Methyltransferase
Complex Mtabc From Methanosarcina Barkeri
pdb|2I2X|E Chain E, Crystal Structure Of Methanol:cobalamin Methyltransferase
Complex Mtabc From Methanosarcina Barkeri
pdb|2I2X|G Chain G, Crystal Structure Of Methanol:cobalamin Methyltransferase
Complex Mtabc From Methanosarcina Barkeri
pdb|2I2X|I Chain I, Crystal Structure Of Methanol:cobalamin Methyltransferase
Complex Mtabc From Methanosarcina Barkeri
pdb|2I2X|K Chain K, Crystal Structure Of Methanol:cobalamin Methyltransferase
Complex Mtabc From Methanosarcina Barkeri
pdb|2I2X|M Chain M, Crystal Structure Of Methanol:cobalamin Methyltransferase
Complex Mtabc From Methanosarcina Barkeri
pdb|2I2X|O Chain O, Crystal Structure Of Methanol:cobalamin Methyltransferase
Complex Mtabc From Methanosarcina Barkeri
Length = 461
Score = 30.4 bits (67), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 13/27 (48%), Positives = 17/27 (62%)
Query: 49 VFIGGGSAGGNIAHTLAFQVGSIGLPR 75
+FIGGG N+AHT+A +I PR
Sbjct: 227 MFIGGGLLNKNLAHTIAVIARAISAPR 253
>pdb|4HK3|J Chain J, I2 Fab (unbound) From Ch65-ch67 Lineage
Length = 237
Score = 28.9 bits (63), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 21/87 (24%), Positives = 40/87 (45%), Gaps = 10/87 (11%)
Query: 84 VHPFFGGTS-PEEDEMWLYMCPTNGGLQDPRLKPPAEDLARLGCERVLIFVAEKDFLKPV 142
+HP GGT+ ++ + W+ M +D + +L+RL + ++ + L+P
Sbjct: 51 IHPNSGGTNYAQKFQGWVTM------TRDTSISTAYMELSRLRSDDTAVYYCARGGLEPR 104
Query: 143 AMNYY---EDLKKSGWKGTVELVETHG 166
+++YY D+ G TV T G
Sbjct: 105 SVDYYYYGMDVWGQGTTVTVSSASTKG 131
>pdb|1GWJ|A Chain A, Morphinone Reductase
Length = 377
Score = 28.1 bits (61), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 13/42 (30%), Positives = 21/42 (50%), Gaps = 6/42 (14%)
Query: 131 IFVAEKDFLKPVAMNY------YEDLKKSGWKGTVELVETHG 166
+ ++E + P A Y + D +++GWKG VE V G
Sbjct: 57 LIISEATNISPTARGYVYTPGIWTDAQEAGWKGVVEAVHAKG 98
>pdb|3GX9|A Chain A, Structure Of Morphinone Reductase N189a Mutant In Complex
With Tetrahydronad
Length = 377
Score = 27.7 bits (60), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 13/42 (30%), Positives = 21/42 (50%), Gaps = 6/42 (14%)
Query: 131 IFVAEKDFLKPVAMNY------YEDLKKSGWKGTVELVETHG 166
+ ++E + P A Y + D +++GWKG VE V G
Sbjct: 57 LIISEATNISPTARGYVYTPGIWTDAQEAGWKGVVEAVHAKG 98
>pdb|2R14|A Chain A, Structure Of Morphinone Reductase In Complex With
Tetrahydronad
Length = 377
Score = 27.7 bits (60), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 13/42 (30%), Positives = 21/42 (50%), Gaps = 6/42 (14%)
Query: 131 IFVAEKDFLKPVAMNY------YEDLKKSGWKGTVELVETHG 166
+ ++E + P A Y + D +++GWKG VE V G
Sbjct: 57 LIISEATNISPTARGYVYTPGIWTDAQEAGWKGVVEAVHAKG 98
>pdb|1FIZ|A Chain A, Three Dimensional Structure Of Beta-Acrosin From Boar
Spermatozoa
Length = 263
Score = 27.7 bits (60), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 10/22 (45%), Positives = 12/22 (54%)
Query: 14 PACYEDSWAALNWVASHAGGNG 35
P Y +W LNW+AS G N
Sbjct: 231 PGVYTSTWPYLNWIASKIGSNA 252
>pdb|2PT1|A Chain A, Futa1 Synechocystis Pcc 6803
pdb|2PT2|A Chain A, Structure Of Futa1 With Iron(Ii)
pdb|3F11|A Chain A, Structure Of Futa1 With Iron(Iii)
Length = 334
Score = 26.9 bits (58), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 12/42 (28%), Positives = 21/42 (50%)
Query: 126 CERVLIFVAEKDFLKPVAMNYYEDLKKSGWKGTVELVETHGE 167
+R + + K +KP ++ YE+L WKG V + + E
Sbjct: 117 TKRARVIMYNKGKVKPEELSTYEELADPKWKGRVIIRSSSNE 158
>pdb|1Y1N|A Chain A, Identification Of Sh3 Motif In M. Tuberculosis
Methionine Aminopeptidase Suggests A Mode Of
Interaction With The Ribosome
pdb|1YJ3|A Chain A, Crystal Structure Analysis Of Product Bound Methionine
Aminopeptidase Type 1c From Mycobacterium Tuberculosis
Length = 291
Score = 26.9 bits (58), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 17/56 (30%), Positives = 25/56 (44%), Gaps = 6/56 (10%)
Query: 7 LFPDRPIPACYEDSWAAL-NWVASHAGGNGPEPWLNDHADFGRVFIGGGSAGGNIA 61
L P RP+P +W A +V A G EPW+ ++ + G A G +A
Sbjct: 18 LSPTRPVP-----NWIARPEYVGKPAAQEGSEPWVQTPEVIEKMRVAGRIAAGALA 68
>pdb|3PKA|A Chain A, M. Tuberculosis Metap With Bengamide Analog Y02, In Mn
Form
pdb|3PKB|A Chain A, M. Tuberculosis Metap With Bengamide Analog Y16, In Mn
Form
pdb|3PKC|A Chain A, M. Tuberculosis Metap With Bengamide Analog Y08, In Mn
Form
pdb|3PKD|A Chain A, M. Tuberculosis Metap With Bengamide Analog Y10, In Mn
Form
pdb|3PKE|A Chain A, M. Tuberculosis Metap With Bengamide Analog Y10, In Ni
Form
Length = 285
Score = 26.9 bits (58), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 17/56 (30%), Positives = 25/56 (44%), Gaps = 6/56 (10%)
Query: 7 LFPDRPIPACYEDSWAAL-NWVASHAGGNGPEPWLNDHADFGRVFIGGGSAGGNIA 61
L P RP+P +W A +V A G EPW+ ++ + G A G +A
Sbjct: 12 LSPTRPVP-----NWIARPEYVGKPAAQEGSEPWVQTPEVIEKMRVAGRIAAGALA 62
>pdb|3ROR|A Chain A, Crystal Structure Of C105s Mutant Of Mycobacterium
Tuberculosis Methionine Aminopeptidase
Length = 291
Score = 26.9 bits (58), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 17/56 (30%), Positives = 25/56 (44%), Gaps = 6/56 (10%)
Query: 7 LFPDRPIPACYEDSWAAL-NWVASHAGGNGPEPWLNDHADFGRVFIGGGSAGGNIA 61
L P RP+P +W A +V A G EPW+ ++ + G A G +A
Sbjct: 18 LSPTRPVP-----NWIARPEYVGKPAAQEGSEPWVQTPEVIEKMRVAGRIAAGALA 68
>pdb|3IU7|A Chain A, M. Tuberculosis Methionine Aminopeptidase With Mn
Inhibitor A02
pdb|3IU8|A Chain A, M. Tuberculosis Methionine Aminopeptidase With Ni
Inhibitor T03
pdb|3IU9|A Chain A, M. Tuberculosis Methionine Aminopeptidase With Ni
Inhibitor T07
Length = 288
Score = 26.9 bits (58), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 17/56 (30%), Positives = 25/56 (44%), Gaps = 6/56 (10%)
Query: 7 LFPDRPIPACYEDSWAAL-NWVASHAGGNGPEPWLNDHADFGRVFIGGGSAGGNIA 61
L P RP+P +W A +V A G EPW+ ++ + G A G +A
Sbjct: 15 LSPTRPVP-----NWIARPEYVGKPAAQEGSEPWVQTPEVIEKMRVAGRIAAGALA 65
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.320 0.141 0.457
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,026,091
Number of Sequences: 62578
Number of extensions: 323367
Number of successful extensions: 632
Number of sequences better than 100.0: 49
Number of HSP's better than 100.0 without gapping: 34
Number of HSP's successfully gapped in prelim test: 15
Number of HSP's that attempted gapping in prelim test: 573
Number of HSP's gapped (non-prelim): 55
length of query: 195
length of database: 14,973,337
effective HSP length: 94
effective length of query: 101
effective length of database: 9,091,005
effective search space: 918191505
effective search space used: 918191505
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 49 (23.5 bits)