Query 039671
Match_columns 195
No_of_seqs 130 out of 1544
Neff 10.0
Searched_HMMs 46136
Date Fri Mar 29 12:00:14 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/039671.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/039671hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG1515 Arylacetamide deacetyl 100.0 1.2E-33 2.7E-38 219.9 18.6 184 1-194 127-334 (336)
2 PRK10162 acetyl esterase; Prov 100.0 2E-32 4.3E-37 215.0 17.3 183 1-194 116-314 (318)
3 COG0657 Aes Esterase/lipase [L 100.0 1E-30 2.2E-35 205.1 18.7 178 1-194 114-309 (312)
4 PF07859 Abhydrolase_3: alpha/ 100.0 3E-31 6.4E-36 197.0 9.3 157 1-172 33-210 (211)
5 PF00326 Peptidase_S9: Prolyl 99.9 2.4E-21 5.3E-26 144.1 9.5 169 2-194 19-208 (213)
6 COG1506 DAP2 Dipeptidyl aminop 99.8 3.7E-18 8.1E-23 144.9 10.6 154 14-195 451-616 (620)
7 KOG4388 Hormone-sensitive lipa 99.7 1.4E-17 3.1E-22 134.6 11.2 78 1-88 431-508 (880)
8 PF10340 DUF2424: Protein of u 99.7 1.1E-16 2.4E-21 125.8 14.6 158 1-172 158-351 (374)
9 KOG4627 Kynurenine formamidase 99.7 4.4E-18 9.5E-23 121.6 3.1 148 1-175 101-251 (270)
10 PF02230 Abhydrolase_2: Phosph 99.7 6.9E-16 1.5E-20 115.1 11.8 112 44-195 102-215 (216)
11 TIGR02821 fghA_ester_D S-formy 99.7 2.1E-15 4.6E-20 116.4 14.8 133 44-194 135-273 (275)
12 PF01738 DLH: Dienelactone hyd 99.7 4.9E-16 1.1E-20 116.0 10.5 136 15-195 77-217 (218)
13 PRK11460 putative hydrolase; P 99.6 1.8E-14 3.9E-19 108.6 14.2 93 44-172 100-194 (232)
14 KOG1455 Lysophospholipase [Lip 99.6 2.8E-15 6.1E-20 113.5 9.7 161 12-195 105-312 (313)
15 PLN02442 S-formylglutathione h 99.6 3.2E-14 7E-19 110.2 15.0 133 44-193 140-278 (283)
16 COG0400 Predicted esterase [Ge 99.6 1.4E-14 3E-19 106.4 11.3 127 16-194 76-204 (207)
17 COG0412 Dienelactone hydrolase 99.6 1.1E-13 2.4E-18 104.3 13.9 136 14-195 90-233 (236)
18 PRK10566 esterase; Provisional 99.6 2E-13 4.4E-18 103.6 14.7 143 16-195 87-248 (249)
19 PLN02298 hydrolase, alpha/beta 99.5 2.7E-13 5.9E-18 107.2 15.2 160 12-194 110-316 (330)
20 PRK10115 protease 2; Provision 99.5 7E-14 1.5E-18 119.9 10.7 135 15-170 503-653 (686)
21 KOG2100 Dipeptidyl aminopeptid 99.5 2.2E-13 4.8E-18 117.5 12.8 155 15-195 587-747 (755)
22 PF08840 BAAT_C: BAAT / Acyl-C 99.5 2.7E-13 5.8E-18 100.8 10.3 157 17-195 3-210 (213)
23 PRK13604 luxD acyl transferase 99.5 1.1E-13 2.3E-18 107.0 8.0 132 13-172 88-246 (307)
24 PHA02857 monoglyceride lipase; 99.5 1.6E-12 3.5E-17 100.1 14.4 153 15-194 78-272 (276)
25 PLN02385 hydrolase; alpha/beta 99.5 1E-12 2.2E-17 104.8 13.4 161 12-195 138-345 (349)
26 KOG1552 Predicted alpha/beta h 99.5 3.5E-13 7.5E-18 100.2 9.4 122 14-169 109-232 (258)
27 PRK10749 lysophospholipase L2; 99.4 7.2E-12 1.6E-16 99.2 15.2 161 13-195 110-329 (330)
28 PF12695 Abhydrolase_5: Alpha/ 99.4 3.7E-12 7.9E-17 88.6 11.4 112 3-170 32-145 (145)
29 PRK05077 frsA fermentation/res 99.3 5.7E-11 1.2E-15 96.7 14.7 147 19-195 248-412 (414)
30 PLN02652 hydrolase; alpha/beta 99.3 5.5E-11 1.2E-15 96.2 14.4 155 14-194 188-386 (395)
31 COG2267 PldB Lysophospholipase 99.3 7.6E-11 1.6E-15 91.9 14.4 139 46-194 106-293 (298)
32 COG1647 Esterase/lipase [Gener 99.3 4.9E-12 1.1E-16 91.9 6.8 152 12-194 64-243 (243)
33 KOG3043 Predicted hydrolase re 99.3 1.1E-11 2.4E-16 90.1 8.1 136 11-195 97-240 (242)
34 KOG2112 Lysophospholipase [Lip 99.3 4E-11 8.6E-16 86.6 10.6 132 16-194 70-203 (206)
35 TIGR03100 hydr1_PEP hydrolase, 99.3 1E-10 2.2E-15 90.3 13.2 155 12-194 77-274 (274)
36 TIGR03056 bchO_mg_che_rel puta 99.3 3.2E-10 7E-15 86.9 14.9 55 16-89 77-131 (278)
37 TIGR01840 esterase_phb esteras 99.2 4.4E-11 9.6E-16 88.9 8.8 121 15-153 74-197 (212)
38 TIGR03695 menH_SHCHC 2-succiny 99.2 4.8E-10 1E-14 83.7 14.5 41 44-90 67-107 (251)
39 PLN02824 hydrolase, alpha/beta 99.2 8.4E-10 1.8E-14 85.9 15.6 59 128-195 236-294 (294)
40 PRK10985 putative hydrolase; P 99.2 7.4E-11 1.6E-15 93.2 9.6 59 15-90 112-170 (324)
41 PRK03592 haloalkane dehalogena 99.2 7.3E-10 1.6E-14 86.2 13.6 38 45-88 91-128 (295)
42 PRK00870 haloalkane dehalogena 99.2 7.8E-10 1.7E-14 86.4 13.3 65 122-195 236-301 (302)
43 TIGR03611 RutD pyrimidine util 99.2 4.7E-10 1E-14 84.6 11.3 133 44-194 77-257 (257)
44 TIGR02427 protocat_pcaD 3-oxoa 99.2 6.2E-10 1.3E-14 83.3 11.8 39 44-88 76-114 (251)
45 PLN02511 hydrolase 99.2 1.5E-10 3.3E-15 93.6 9.0 60 14-90 153-212 (388)
46 TIGR02240 PHA_depoly_arom poly 99.2 1.2E-09 2.6E-14 84.2 13.7 131 45-194 89-265 (276)
47 PRK11071 esterase YqiA; Provis 99.2 5.4E-10 1.2E-14 81.7 10.7 132 17-193 44-189 (190)
48 TIGR01250 pro_imino_pep_2 prol 99.2 1.4E-09 3.1E-14 83.2 13.6 53 17-88 79-131 (288)
49 TIGR01607 PST-A Plasmodium sub 99.2 6.1E-10 1.3E-14 88.3 11.6 175 12-194 100-332 (332)
50 KOG2281 Dipeptidyl aminopeptid 99.1 6.1E-10 1.3E-14 92.0 11.7 153 15-194 705-866 (867)
51 TIGR01836 PHA_synth_III_C poly 99.1 1.5E-09 3.1E-14 86.8 13.8 55 18-91 120-174 (350)
52 TIGR03343 biphenyl_bphD 2-hydr 99.1 1.2E-09 2.5E-14 84.3 12.8 132 44-193 98-281 (282)
53 PF05728 UPF0227: Uncharacteri 99.1 1E-09 2.3E-14 79.7 11.6 138 14-192 39-186 (187)
54 PRK14875 acetoin dehydrogenase 99.1 3E-09 6.4E-14 85.3 15.4 149 15-195 178-371 (371)
55 PF05448 AXE1: Acetyl xylan es 99.1 3.7E-10 8E-15 88.8 9.8 149 15-195 154-320 (320)
56 PLN02965 Probable pheophorbida 99.1 8.6E-09 1.9E-13 78.6 16.6 35 47-87 72-106 (255)
57 COG2945 Predicted hydrolase of 99.1 8.8E-10 1.9E-14 78.6 9.9 134 3-192 66-204 (210)
58 PLN00021 chlorophyllase 99.1 3.7E-09 8E-14 83.0 14.4 145 3-169 85-239 (313)
59 PRK03204 haloalkane dehalogena 99.1 8E-09 1.7E-13 80.2 15.3 55 15-88 82-136 (286)
60 PRK10673 acyl-CoA esterase; Pr 99.1 6.8E-09 1.5E-13 78.8 14.7 59 128-195 197-255 (255)
61 PRK10439 enterobactin/ferric e 99.1 1.4E-09 3E-14 88.3 11.4 107 44-174 285-395 (411)
62 TIGR01738 bioH putative pimelo 99.1 1.7E-09 3.6E-14 80.7 10.5 36 47-88 65-100 (245)
63 PLN02679 hydrolase, alpha/beta 99.1 1.3E-08 2.9E-13 81.6 15.6 60 128-194 294-356 (360)
64 PF12697 Abhydrolase_6: Alpha/ 99.0 3E-09 6.4E-14 78.2 9.7 118 45-173 64-219 (228)
65 KOG2984 Predicted hydrolase [G 99.0 6.4E-10 1.4E-14 80.0 5.5 154 4-194 81-275 (277)
66 PRK05371 x-prolyl-dipeptidyl a 99.0 1E-08 2.2E-13 89.2 13.8 166 14-194 302-518 (767)
67 PRK11126 2-succinyl-6-hydroxy- 99.0 1E-08 2.2E-13 77.2 11.8 39 45-88 64-102 (242)
68 KOG4409 Predicted hydrolase/ac 99.0 1.5E-08 3.3E-13 78.7 12.1 41 45-91 158-198 (365)
69 PRK07581 hypothetical protein; 99.0 1E-08 2.2E-13 81.4 11.5 52 17-87 106-158 (339)
70 PLN02894 hydrolase, alpha/beta 99.0 3.9E-08 8.6E-13 80.0 15.0 39 44-88 173-211 (402)
71 cd00312 Esterase_lipase Estera 99.0 3.4E-10 7.4E-15 94.3 3.0 78 1-90 129-215 (493)
72 PRK06765 homoserine O-acetyltr 98.9 1.1E-07 2.3E-12 77.0 16.7 60 128-194 325-387 (389)
73 PRK10349 carboxylesterase BioH 98.9 2.5E-08 5.4E-13 75.9 12.4 36 46-87 73-108 (256)
74 COG0627 Predicted esterase [Ge 98.9 4.5E-09 9.7E-14 82.2 8.1 132 47-193 152-309 (316)
75 COG1505 Serine proteases of th 98.9 2.2E-09 4.9E-14 88.2 6.4 159 14-194 478-645 (648)
76 PRK06489 hypothetical protein; 98.9 3.1E-08 6.8E-13 79.4 12.8 37 45-87 151-188 (360)
77 PF08538 DUF1749: Protein of u 98.9 1.9E-09 4E-14 83.0 5.4 71 12-92 82-152 (303)
78 TIGR03101 hydr2_PEP hydrolase, 98.9 4.5E-08 9.8E-13 75.1 12.7 155 12-191 78-264 (266)
79 PF10503 Esterase_phd: Esteras 98.9 1.5E-08 3.4E-13 75.3 9.3 115 18-152 79-197 (220)
80 TIGR01249 pro_imino_pep_1 prol 98.9 6.3E-08 1.4E-12 75.9 12.9 53 16-87 77-129 (306)
81 PF06500 DUF1100: Alpha/beta h 98.9 4.9E-08 1.1E-12 78.2 12.3 144 20-194 245-408 (411)
82 PF06821 Ser_hydrolase: Serine 98.9 8.3E-08 1.8E-12 68.9 12.3 102 46-175 54-157 (171)
83 COG4099 Predicted peptidase [G 98.9 3.4E-09 7.4E-14 80.4 5.3 110 22-174 251-366 (387)
84 PF00756 Esterase: Putative es 98.9 1.5E-09 3.2E-14 82.6 3.4 125 22-174 101-240 (251)
85 KOG3101 Esterase D [General fu 98.9 3.7E-09 8E-14 76.6 4.7 128 44-179 138-270 (283)
86 KOG4391 Predicted alpha/beta h 98.8 5.2E-09 1.1E-13 76.2 5.4 129 14-169 127-262 (300)
87 PRK00175 metX homoserine O-ace 98.8 1.7E-07 3.8E-12 75.7 14.9 65 123-195 307-374 (379)
88 COG1770 PtrB Protease II [Amin 98.8 3.7E-08 8.1E-13 82.0 11.0 137 15-170 506-656 (682)
89 PLN03087 BODYGUARD 1 domain co 98.8 1.6E-07 3.4E-12 77.7 14.6 39 44-88 271-309 (481)
90 COG3208 GrsT Predicted thioest 98.8 7.7E-08 1.7E-12 71.5 11.3 149 16-192 52-233 (244)
91 TIGR01392 homoserO_Ac_trn homo 98.8 3.7E-07 8E-12 73.0 15.9 56 15-89 107-163 (351)
92 PRK04940 hypothetical protein; 98.8 2.4E-07 5.3E-12 66.4 13.2 118 47-193 60-178 (180)
93 PF00561 Abhydrolase_1: alpha/ 98.8 9.4E-08 2E-12 70.9 11.3 54 15-87 25-78 (230)
94 PF00135 COesterase: Carboxyle 98.8 5E-09 1.1E-13 87.9 4.8 76 1-88 160-245 (535)
95 PLN02578 hydrolase 98.8 1.6E-07 3.5E-12 75.1 13.0 36 46-87 151-186 (354)
96 PRK08775 homoserine O-acetyltr 98.8 1.9E-07 4E-12 74.4 13.2 57 128-194 279-338 (343)
97 PLN02980 2-oxoglutarate decarb 98.8 2E-07 4.3E-12 87.4 14.9 154 16-194 1427-1638(1655)
98 KOG1454 Predicted hydrolase/ac 98.8 1.1E-07 2.4E-12 75.1 10.7 59 128-195 266-324 (326)
99 KOG2237 Predicted serine prote 98.7 1.2E-07 2.6E-12 78.7 10.0 139 15-170 528-683 (712)
100 KOG4667 Predicted esterase [Li 98.7 2.3E-07 4.9E-12 67.7 9.1 134 13-174 85-243 (269)
101 COG2382 Fes Enterochelin ester 98.7 2.8E-07 6E-12 70.5 10.0 110 44-174 174-284 (299)
102 PF12740 Chlorophyllase2: Chlo 98.7 9.8E-07 2.1E-11 66.9 12.9 140 13-174 60-208 (259)
103 KOG1838 Alpha/beta hydrolase [ 98.7 3.1E-07 6.7E-12 73.4 10.3 155 15-193 179-386 (409)
104 PLN03084 alpha/beta hydrolase 98.6 1.4E-06 3E-11 70.4 13.5 39 45-89 195-233 (383)
105 COG3458 Acetyl esterase (deace 98.6 5.4E-08 1.2E-12 73.1 4.9 130 14-169 154-299 (321)
106 PF03583 LIP: Secretory lipase 98.6 1.9E-06 4E-11 67.2 13.7 43 127-171 220-265 (290)
107 TIGR01838 PHA_synth_I poly(R)- 98.6 9.7E-07 2.1E-11 73.8 12.6 57 18-92 246-306 (532)
108 COG4947 Uncharacterized protei 98.6 7.4E-09 1.6E-13 72.6 0.0 123 16-171 83-216 (227)
109 PF02129 Peptidase_S15: X-Pro 98.6 1.5E-07 3.2E-12 72.7 6.8 136 13-170 79-271 (272)
110 PLN02872 triacylglycerol lipas 98.6 1.4E-07 3.1E-12 76.3 6.9 60 128-194 327-388 (395)
111 PF12715 Abhydrolase_7: Abhydr 98.6 5.3E-08 1.1E-12 77.0 3.8 123 18-166 208-343 (390)
112 PF03959 FSH1: Serine hydrolas 98.6 4.7E-07 1E-11 67.4 8.4 118 15-171 81-202 (212)
113 KOG2551 Phospholipase/carboxyh 98.5 1.5E-06 3.2E-11 63.7 10.4 93 50-171 107-203 (230)
114 COG2272 PnbA Carboxylesterase 98.5 3.6E-08 7.7E-13 79.9 1.5 77 1-89 129-218 (491)
115 PLN02211 methyl indole-3-aceta 98.5 1.4E-05 3E-10 61.8 15.0 37 46-88 86-122 (273)
116 TIGR00976 /NonD putative hydro 98.5 2.6E-06 5.7E-11 72.1 11.7 60 14-91 76-135 (550)
117 COG0429 Predicted hydrolase of 98.4 5.2E-07 1.1E-11 69.9 6.3 59 14-90 128-187 (345)
118 KOG4178 Soluble epoxide hydrol 98.4 1.5E-05 3.2E-10 61.9 14.1 61 127-194 259-319 (322)
119 PF06028 DUF915: Alpha/beta hy 98.4 6.8E-06 1.5E-10 62.6 10.5 155 12-192 81-252 (255)
120 KOG2382 Predicted alpha/beta h 98.3 1.5E-05 3.3E-10 61.8 12.1 59 128-195 255-313 (315)
121 PF06057 VirJ: Bacterial virul 98.3 4.7E-06 1E-10 60.1 8.6 139 17-194 51-191 (192)
122 TIGR01839 PHA_synth_II poly(R) 98.3 1.2E-05 2.7E-10 67.1 12.0 66 12-91 266-331 (560)
123 COG3571 Predicted hydrolase of 98.3 7.1E-05 1.5E-09 52.4 13.8 117 44-194 86-210 (213)
124 PRK07868 acyl-CoA synthetase; 98.3 1.1E-05 2.3E-10 72.9 12.2 65 121-194 293-360 (994)
125 cd00707 Pancreat_lipase_like P 98.3 1.6E-06 3.5E-11 67.0 5.4 72 2-90 71-149 (275)
126 PF03403 PAF-AH_p_II: Platelet 98.3 9.6E-06 2.1E-10 65.5 10.0 91 42-169 223-314 (379)
127 PF10230 DUF2305: Uncharacteri 98.2 4.2E-05 9.1E-10 58.9 12.7 64 13-90 61-124 (266)
128 COG3545 Predicted esterase of 98.2 7.4E-05 1.6E-09 53.0 12.4 96 46-169 58-155 (181)
129 KOG2564 Predicted acetyltransf 98.2 5.1E-06 1.1E-10 63.0 7.0 54 13-85 126-179 (343)
130 PF07224 Chlorophyllase: Chlor 98.2 3.5E-05 7.7E-10 58.1 10.7 133 13-169 89-229 (307)
131 PF00975 Thioesterase: Thioest 98.1 3.7E-05 8.1E-10 57.4 10.4 39 48-89 67-105 (229)
132 COG3243 PhaC Poly(3-hydroxyalk 98.1 3.4E-05 7.3E-10 61.9 10.3 72 2-92 149-221 (445)
133 KOG1516 Carboxylesterase and r 98.1 1.5E-06 3.2E-11 73.5 2.6 75 1-87 148-231 (545)
134 COG3509 LpqC Poly(3-hydroxybut 98.0 0.00015 3.2E-09 55.7 11.3 59 16-88 121-179 (312)
135 TIGR01849 PHB_depoly_PhaZ poly 98.0 0.00026 5.7E-09 57.4 13.3 65 128-195 340-406 (406)
136 KOG4389 Acetylcholinesterase/B 97.9 3.2E-06 6.9E-11 68.6 1.3 78 1-90 170-257 (601)
137 TIGR03230 lipo_lipase lipoprot 97.9 3.5E-05 7.5E-10 63.1 7.2 55 17-88 100-154 (442)
138 PRK05855 short chain dehydroge 97.9 0.00028 6.1E-09 59.9 12.5 57 128-194 235-291 (582)
139 KOG3847 Phospholipase A2 (plat 97.9 0.0001 2.2E-09 57.0 8.6 91 43-169 237-327 (399)
140 PF09752 DUF2048: Uncharacteri 97.9 0.0003 6.5E-09 55.5 11.2 41 15-69 157-197 (348)
141 COG2819 Predicted hydrolase of 97.9 7E-05 1.5E-09 56.8 7.3 101 44-171 134-245 (264)
142 COG4814 Uncharacterized protei 97.8 0.0003 6.5E-09 52.9 9.2 157 11-194 113-286 (288)
143 PF11144 DUF2920: Protein of u 97.7 0.00019 4E-09 57.7 8.0 132 16-164 162-331 (403)
144 PF11187 DUF2974: Protein of u 97.7 8.9E-05 1.9E-09 55.5 5.6 55 21-88 69-123 (224)
145 PLN02733 phosphatidylcholine-s 97.7 9.8E-05 2.1E-09 60.6 6.3 64 14-92 142-205 (440)
146 COG2021 MET2 Homoserine acetyl 97.6 0.0011 2.4E-08 52.5 10.6 57 11-86 122-180 (368)
147 PF06342 DUF1057: Alpha/beta h 97.6 0.0027 5.9E-08 48.7 11.8 36 44-88 102-137 (297)
148 PF01764 Lipase_3: Lipase (cla 97.5 0.00052 1.1E-08 47.3 7.1 43 46-88 63-106 (140)
149 COG3150 Predicted esterase [Ge 97.5 0.00097 2.1E-08 47.1 8.0 118 47-192 59-186 (191)
150 PF07819 PGAP1: PGAP1-like pro 97.5 0.00075 1.6E-08 50.7 7.9 69 13-92 59-127 (225)
151 PF02450 LCAT: Lecithin:choles 97.5 0.00019 4.1E-09 58.3 4.8 74 4-92 91-164 (389)
152 KOG3253 Predicted alpha/beta h 97.4 0.002 4.3E-08 54.1 10.3 101 45-175 248-350 (784)
153 cd00741 Lipase Lipase. Lipase 97.4 0.00081 1.8E-08 47.2 7.1 44 45-90 26-69 (153)
154 COG4188 Predicted dienelactone 97.4 0.00071 1.5E-08 53.6 6.9 49 15-67 131-179 (365)
155 KOG2624 Triglyceride lipase-ch 97.3 0.00084 1.8E-08 54.5 7.1 59 16-90 143-201 (403)
156 KOG4840 Predicted hydrolases o 97.3 0.0003 6.5E-09 51.9 3.9 64 11-91 84-147 (299)
157 PF03096 Ndr: Ndr family; Int 97.1 0.017 3.8E-07 44.6 11.9 152 12-193 78-277 (283)
158 cd00519 Lipase_3 Lipase (class 97.1 0.0024 5.2E-08 47.9 7.1 42 46-88 127-168 (229)
159 PF05705 DUF829: Eukaryotic pr 97.0 0.028 6.1E-07 42.5 12.2 45 128-174 180-226 (240)
160 PF05677 DUF818: Chlamydia CHL 97.0 0.0079 1.7E-07 47.4 8.8 57 2-68 176-236 (365)
161 PF11288 DUF3089: Protein of u 96.9 0.0022 4.8E-08 47.2 5.4 43 14-68 74-116 (207)
162 PF02273 Acyl_transf_2: Acyl t 96.9 0.0033 7.2E-08 47.3 6.3 135 12-171 80-238 (294)
163 COG4757 Predicted alpha/beta h 96.9 0.0039 8.4E-08 46.5 6.6 57 128-192 218-280 (281)
164 PF10142 PhoPQ_related: PhoPQ- 96.9 0.025 5.4E-07 45.5 11.6 129 44-194 169-319 (367)
165 PF12048 DUF3530: Protein of u 96.9 0.047 1E-06 43.1 13.0 116 46-195 192-309 (310)
166 KOG3975 Uncharacterized conser 96.9 0.01 2.2E-07 44.8 8.4 53 18-86 93-145 (301)
167 PLN02454 triacylglycerol lipas 96.8 0.0049 1.1E-07 50.0 7.1 45 15-70 207-251 (414)
168 COG1073 Hydrolases of the alph 96.8 0.0033 7.1E-08 48.2 5.8 61 128-194 234-296 (299)
169 PF00151 Lipase: Lipase; Inte 96.7 0.0045 9.8E-08 49.2 5.9 57 18-89 132-188 (331)
170 PTZ00472 serine carboxypeptida 96.7 0.011 2.3E-07 49.3 8.2 67 14-90 148-218 (462)
171 PF05577 Peptidase_S28: Serine 96.7 0.0051 1.1E-07 50.8 6.3 62 13-90 89-150 (434)
172 PF11339 DUF3141: Protein of u 96.7 0.1 2.2E-06 43.6 13.4 48 15-70 116-163 (581)
173 KOG3724 Negative regulator of 96.6 0.0038 8.2E-08 54.0 5.2 51 13-68 152-203 (973)
174 PF00450 Peptidase_S10: Serine 96.5 0.0053 1.1E-07 50.1 5.2 70 15-91 111-184 (415)
175 PF03283 PAE: Pectinacetyleste 96.5 0.015 3.4E-07 46.7 7.5 62 18-90 138-199 (361)
176 KOG2931 Differentiation-relate 96.4 0.16 3.5E-06 39.4 12.0 59 12-90 101-159 (326)
177 PLN02408 phospholipase A1 96.4 0.015 3.2E-07 46.7 6.8 44 16-70 180-223 (365)
178 COG0596 MhpC Predicted hydrola 96.1 0.013 2.8E-07 43.1 5.3 37 46-88 87-123 (282)
179 PF08386 Abhydrolase_4: TAP-li 96.1 0.027 5.8E-07 36.9 5.9 41 127-173 35-77 (103)
180 PLN02802 triacylglycerol lipas 96.1 0.025 5.5E-07 47.0 6.9 45 16-71 310-354 (509)
181 PLN02213 sinapoylglucose-malat 96.0 0.039 8.5E-07 43.7 7.7 48 44-91 48-99 (319)
182 COG2936 Predicted acyl esteras 96.0 0.087 1.9E-06 44.6 9.8 59 15-91 104-162 (563)
183 PF05057 DUF676: Putative seri 96.0 0.045 9.7E-07 40.9 7.4 41 22-70 61-101 (217)
184 COG3319 Thioesterase domains o 96.0 0.039 8.5E-07 42.2 7.1 39 48-89 66-104 (257)
185 PLN02571 triacylglycerol lipas 95.9 0.032 6.9E-07 45.4 6.8 44 16-70 206-249 (413)
186 PF05990 DUF900: Alpha/beta hy 95.9 0.023 5.1E-07 42.9 5.7 46 45-90 91-139 (233)
187 PLN02209 serine carboxypeptida 95.9 0.032 6.9E-07 46.1 6.9 67 17-90 144-214 (437)
188 PLN00413 triacylglycerol lipas 95.9 0.02 4.2E-07 47.3 5.4 40 16-68 266-305 (479)
189 KOG1553 Predicted alpha/beta h 95.6 0.021 4.6E-07 45.1 4.5 52 21-90 296-347 (517)
190 PLN03016 sinapoylglucose-malat 95.6 0.046 1E-06 45.2 6.7 47 45-91 163-213 (433)
191 PLN02719 triacylglycerol lipas 95.6 0.065 1.4E-06 44.7 7.4 48 15-70 274-321 (518)
192 PLN02310 triacylglycerol lipas 95.6 0.052 1.1E-06 44.1 6.7 45 16-69 187-231 (405)
193 COG4782 Uncharacterized protei 95.6 0.04 8.6E-07 43.9 5.8 60 18-90 175-236 (377)
194 PLN02517 phosphatidylcholine-s 95.6 0.028 6E-07 47.7 5.3 75 3-90 180-265 (642)
195 PLN02934 triacylglycerol lipas 95.6 0.031 6.8E-07 46.5 5.5 41 15-68 302-342 (515)
196 TIGR03712 acc_sec_asp2 accesso 95.5 0.2 4.4E-06 41.5 9.9 40 44-91 354-393 (511)
197 KOG2183 Prolylcarboxypeptidase 95.5 0.015 3.2E-07 47.0 3.4 62 14-91 145-206 (492)
198 KOG1282 Serine carboxypeptidas 95.5 0.049 1.1E-06 45.1 6.5 83 3-92 131-217 (454)
199 PLN03037 lipase class 3 family 95.5 0.061 1.3E-06 44.9 6.9 23 47-69 318-340 (525)
200 PLN02753 triacylglycerol lipas 95.4 0.071 1.5E-06 44.6 7.2 48 15-70 288-335 (531)
201 PLN02324 triacylglycerol lipas 95.4 0.069 1.5E-06 43.5 6.8 43 15-68 194-236 (415)
202 KOG4569 Predicted lipase [Lipi 95.3 0.068 1.5E-06 42.7 6.7 58 18-88 155-212 (336)
203 PF01083 Cutinase: Cutinase; 95.2 0.087 1.9E-06 38.1 6.5 45 44-90 78-124 (179)
204 PLN02162 triacylglycerol lipas 95.2 0.049 1.1E-06 44.9 5.4 23 46-68 277-299 (475)
205 PLN02761 lipase class 3 family 94.9 0.11 2.3E-06 43.5 6.9 48 15-69 269-316 (527)
206 PF07082 DUF1350: Protein of u 94.9 0.63 1.4E-05 35.3 10.2 45 125-172 162-206 (250)
207 PLN02847 triacylglycerol lipas 94.8 0.12 2.7E-06 43.9 6.8 38 47-87 251-289 (633)
208 TIGR03502 lipase_Pla1_cef extr 94.6 0.062 1.3E-06 47.4 5.0 51 12-69 521-577 (792)
209 PF07519 Tannase: Tannase and 94.2 0.1 2.3E-06 43.6 5.4 64 128-194 355-426 (474)
210 smart00824 PKS_TE Thioesterase 94.2 0.32 7E-06 35.0 7.4 38 46-86 63-100 (212)
211 KOG2369 Lecithin:cholesterol a 94.2 0.09 1.9E-06 43.3 4.6 26 45-70 180-205 (473)
212 PF01674 Lipase_2: Lipase (cla 93.2 0.17 3.6E-06 37.9 4.3 37 18-68 60-96 (219)
213 COG2939 Carboxypeptidase C (ca 92.8 0.13 2.8E-06 42.7 3.6 70 12-92 171-240 (498)
214 COG3946 VirJ Type IV secretory 92.4 0.18 3.9E-06 40.8 3.8 113 16-172 308-432 (456)
215 PF09994 DUF2235: Uncharacteri 92.2 0.37 8.1E-06 37.4 5.3 47 15-73 72-118 (277)
216 COG1075 LipA Predicted acetylt 91.0 0.64 1.4E-05 37.2 5.6 61 16-90 106-166 (336)
217 PRK10252 entF enterobactin syn 90.6 0.96 2.1E-05 42.5 7.2 37 47-86 1133-1169(1296)
218 COG3673 Uncharacterized conser 90.2 0.7 1.5E-05 36.5 4.9 41 17-69 104-144 (423)
219 PF08237 PE-PPE: PE-PPE domain 89.7 2.8 6.1E-05 31.5 7.8 27 45-71 46-72 (225)
220 KOG1551 Uncharacterized conser 89.7 1.5 3.4E-05 33.7 6.3 24 46-69 194-217 (371)
221 PF10605 3HBOH: 3HB-oligomer h 89.1 1.5 3.4E-05 37.5 6.5 66 128-194 557-636 (690)
222 PF05576 Peptidase_S37: PS-10 88.9 0.42 9.2E-06 39.0 3.0 61 126-192 351-411 (448)
223 COG5153 CVT17 Putative lipase 88.7 1.1 2.5E-05 34.8 5.0 23 46-68 275-297 (425)
224 KOG4540 Putative lipase essent 88.7 1.1 2.5E-05 34.8 5.0 23 46-68 275-297 (425)
225 PF12242 Eno-Rase_NADH_b: NAD( 88.3 1.8 3.9E-05 26.5 4.7 42 17-68 20-61 (78)
226 KOG2029 Uncharacterized conser 87.9 1.7 3.7E-05 37.2 5.9 42 44-85 523-569 (697)
227 PF06259 Abhydrolase_8: Alpha/ 87.7 2.1 4.5E-05 31.0 5.6 23 45-67 107-129 (177)
228 PF05277 DUF726: Protein of un 86.9 2.8 6.1E-05 33.7 6.5 45 45-90 218-262 (345)
229 COG0596 MhpC Predicted hydrola 86.8 2.5 5.4E-05 30.7 6.0 57 128-193 223-280 (282)
230 KOG3967 Uncharacterized conser 86.3 3.1 6.8E-05 31.1 5.9 58 13-87 169-226 (297)
231 PLN02633 palmitoyl protein thi 85.7 1.8 4E-05 34.1 4.8 36 48-87 95-130 (314)
232 PLN02606 palmitoyl-protein thi 84.7 2.1 4.4E-05 33.7 4.6 36 48-87 96-131 (306)
233 PF06850 PHB_depo_C: PHB de-po 83.6 4.4 9.5E-05 29.7 5.6 66 128-195 136-202 (202)
234 COG4553 DepA Poly-beta-hydroxy 83.3 21 0.00045 28.3 11.3 71 119-195 335-407 (415)
235 PF10081 Abhydrolase_9: Alpha/ 82.1 3.2 6.9E-05 32.3 4.7 79 1-89 65-148 (289)
236 KOG2182 Hydrolytic enzymes of 81.3 4.7 0.0001 33.8 5.6 58 15-88 150-207 (514)
237 PF02089 Palm_thioest: Palmito 81.3 4 8.7E-05 31.7 5.0 36 48-88 81-116 (279)
238 PF06500 DUF1100: Alpha/beta h 81.1 2 4.4E-05 35.2 3.5 63 128-194 191-254 (411)
239 PF07519 Tannase: Tannase and 78.5 5 0.00011 33.8 5.1 60 17-92 95-154 (474)
240 KOG2541 Palmitoyl protein thio 78.2 21 0.00045 27.8 7.8 37 46-87 91-127 (296)
241 COG4287 PqaA PhoPQ-activated p 77.6 13 0.00028 30.3 6.8 40 125-169 329-369 (507)
242 cd07224 Pat_like Patatin-like 75.7 3.9 8.4E-05 30.9 3.5 34 23-68 17-50 (233)
243 PF12122 DUF3582: Protein of u 67.8 21 0.00047 23.2 5.1 48 142-193 12-59 (101)
244 cd07218 Pat_iPLA2 Calcium-inde 67.5 8.1 0.00018 29.4 3.6 18 51-68 34-51 (245)
245 cd07205 Pat_PNPLA6_PNPLA7_NTE1 64.7 9.5 0.00021 27.1 3.4 19 50-68 31-49 (175)
246 PF12146 Hydrolase_4: Putative 62.1 34 0.00073 20.9 5.1 61 128-193 18-79 (79)
247 KOG2521 Uncharacterized conser 59.6 44 0.00096 27.0 6.5 61 128-194 227-289 (350)
248 cd07210 Pat_hypo_W_succinogene 59.3 14 0.00029 27.7 3.5 18 50-67 31-48 (221)
249 cd07230 Pat_TGL4-5_like Triacy 59.1 12 0.00027 31.0 3.5 19 50-68 104-122 (421)
250 cd07198 Patatin Patatin-like p 58.8 15 0.00032 26.1 3.5 21 48-68 27-47 (172)
251 cd07207 Pat_ExoU_VipD_like Exo 58.5 14 0.0003 26.7 3.3 20 49-68 29-48 (194)
252 KOG1283 Serine carboxypeptidas 58.1 22 0.00048 28.4 4.4 65 22-93 104-171 (414)
253 PRK10279 hypothetical protein; 57.2 14 0.0003 29.2 3.3 19 49-67 35-53 (300)
254 PF04301 DUF452: Protein of un 55.5 18 0.00038 27.0 3.4 36 46-89 56-91 (213)
255 cd07204 Pat_PNPLA_like Patatin 54.4 18 0.00038 27.5 3.4 20 49-68 33-52 (243)
256 PF04260 DUF436: Protein of un 54.4 17 0.00036 26.0 3.0 28 18-56 1-28 (172)
257 cd07212 Pat_PNPLA9 Patatin-lik 53.9 10 0.00022 30.0 2.1 18 50-67 35-52 (312)
258 cd00883 beta_CA_cladeA Carboni 53.3 21 0.00046 25.8 3.5 33 18-63 65-97 (182)
259 cd00382 beta_CA Carbonic anhyd 52.8 25 0.00054 23.5 3.6 32 17-61 42-73 (119)
260 cd07222 Pat_PNPLA4 Patatin-lik 52.5 18 0.00039 27.6 3.2 17 50-66 34-50 (246)
261 PF05116 S6PP: Sucrose-6F-phos 50.6 16 0.00034 27.8 2.6 25 21-56 167-191 (247)
262 cd07225 Pat_PNPLA6_PNPLA7 Pata 50.1 21 0.00046 28.2 3.3 19 49-67 45-63 (306)
263 TIGR02240 PHA_depoly_arom poly 50.0 91 0.002 23.6 6.9 61 127-193 26-86 (276)
264 cd07228 Pat_NTE_like_bacteria 49.9 13 0.00029 26.4 2.1 20 49-68 30-49 (175)
265 KOG1202 Animal-type fatty acid 49.7 46 0.001 31.9 5.6 36 48-87 2183-2218(2376)
266 PLN03006 carbonate dehydratase 49.1 26 0.00056 27.6 3.6 31 20-63 158-188 (301)
267 PRK05077 frsA fermentation/res 49.0 1.1E+02 0.0025 25.2 7.6 62 128-193 195-257 (414)
268 PF01734 Patatin: Patatin-like 48.9 15 0.00033 25.8 2.2 22 47-68 27-48 (204)
269 PRK13690 hypothetical protein; 48.7 28 0.0006 25.1 3.4 31 15-56 5-35 (184)
270 COG4822 CbiK Cobalamin biosynt 48.7 1.2E+02 0.0025 23.0 9.1 113 17-162 117-235 (265)
271 TIGR01250 pro_imino_pep_2 prol 48.4 1.1E+02 0.0024 22.6 7.1 40 127-168 26-65 (288)
272 COG3007 Uncharacterized paraqu 48.3 44 0.00096 26.4 4.6 42 19-69 23-64 (398)
273 cd07211 Pat_PNPLA8 Patatin-lik 48.0 14 0.00031 29.0 2.1 17 50-66 44-60 (308)
274 PF05577 Peptidase_S28: Serine 47.8 40 0.00088 27.8 4.8 43 127-176 377-419 (434)
275 KOG2385 Uncharacterized conser 46.3 90 0.0019 26.8 6.4 45 45-90 445-489 (633)
276 cd07213 Pat17_PNPLA8_PNPLA9_li 46.2 16 0.00034 28.5 2.1 19 50-68 37-55 (288)
277 cd07220 Pat_PNPLA2 Patatin-lik 45.9 29 0.00062 26.6 3.4 20 49-68 38-57 (249)
278 COG0331 FabD (acyl-carrier-pro 45.0 39 0.00085 26.8 4.1 45 10-66 60-104 (310)
279 PF11713 Peptidase_C80: Peptid 44.6 29 0.00064 24.5 3.0 16 44-59 101-116 (157)
280 TIGR01440 conserved hypothetic 44.5 34 0.00073 24.4 3.2 27 19-56 2-28 (172)
281 cd07209 Pat_hypo_Ecoli_Z1214_l 44.3 18 0.00039 26.8 2.0 20 49-68 28-47 (215)
282 cd07208 Pat_hypo_Ecoli_yjju_li 44.0 18 0.00039 27.7 2.1 20 50-69 30-49 (266)
283 cd00884 beta_CA_cladeB Carboni 44.0 38 0.00082 24.8 3.6 33 19-64 72-104 (190)
284 PLN02578 hydrolase 43.8 96 0.0021 24.8 6.3 62 127-194 87-148 (354)
285 PF08484 Methyltransf_14: C-me 43.7 31 0.00067 24.4 3.1 37 45-87 67-103 (160)
286 cd07199 Pat17_PNPLA8_PNPLA9_li 43.7 17 0.00038 27.7 1.9 18 50-67 37-54 (258)
287 cd07216 Pat17_PNPLA8_PNPLA9_li 43.5 15 0.00032 29.0 1.5 17 50-66 45-61 (309)
288 cd07214 Pat17_isozyme_like Pat 43.4 17 0.00036 29.4 1.8 18 50-67 46-63 (349)
289 KOG1455 Lysophospholipase [Lip 43.4 1.4E+02 0.003 23.8 6.7 62 129-193 57-118 (313)
290 KOG2214 Predicted esterase of 43.3 10 0.00023 31.9 0.7 25 46-70 201-225 (543)
291 PF14253 AbiH: Bacteriophage a 43.0 15 0.00032 28.1 1.4 19 44-62 232-250 (270)
292 cd07217 Pat17_PNPLA8_PNPLA9_li 42.7 18 0.0004 29.1 2.0 17 50-66 44-60 (344)
293 PRK15219 carbonic anhydrase; P 42.6 39 0.00085 25.8 3.6 33 18-63 127-159 (245)
294 PLN00416 carbonate dehydratase 42.6 38 0.00082 26.1 3.6 33 19-64 125-157 (258)
295 KOG4287 Pectin acetylesterase 42.3 11 0.00024 30.3 0.7 19 44-62 173-191 (402)
296 cd07229 Pat_TGL3_like Triacylg 41.4 35 0.00076 28.0 3.4 19 50-68 114-132 (391)
297 PRK03592 haloalkane dehalogena 41.1 1.4E+02 0.0031 22.8 6.8 62 127-194 28-89 (295)
298 PLN02154 carbonic anhydrase 40.1 48 0.001 26.0 3.8 33 19-64 151-183 (290)
299 cd01819 Patatin_and_cPLA2 Pata 40.1 46 0.001 23.2 3.5 19 47-65 28-46 (155)
300 PLN03014 carbonic anhydrase 40.0 38 0.00082 27.3 3.3 32 19-63 205-236 (347)
301 PF08357 SEFIR: SEFIR domain; 39.9 40 0.00086 23.1 3.2 39 127-166 1-40 (150)
302 PF10432 bact-PGI_C: Bacterial 39.6 40 0.00088 23.7 3.1 41 128-170 18-58 (155)
303 COG0288 CynT Carbonic anhydras 38.9 39 0.00084 25.1 3.0 35 18-65 76-110 (207)
304 PRK10437 carbonic anhydrase; P 38.6 57 0.0012 24.5 3.9 33 19-64 76-108 (220)
305 PF00484 Pro_CA: Carbonic anhy 38.2 82 0.0018 21.7 4.6 33 17-62 38-70 (153)
306 cd07232 Pat_PLPL Patain-like p 38.1 23 0.00049 29.3 1.9 19 50-68 98-116 (407)
307 cd07227 Pat_Fungal_NTE1 Fungal 38.1 25 0.00054 27.3 2.0 19 49-67 40-58 (269)
308 cd07219 Pat_PNPLA1 Patatin-lik 37.8 46 0.001 27.3 3.5 19 49-67 46-64 (382)
309 cd01826 acyloxyacyl_hydrolase_ 37.7 19 0.00041 28.5 1.3 19 44-62 9-27 (305)
310 PF14714 KH_dom-like: KH-domai 37.2 1E+02 0.0022 19.0 4.5 36 126-162 38-78 (80)
311 PLN03019 carbonic anhydrase 36.8 43 0.00092 26.8 3.1 33 19-64 200-232 (330)
312 cd07215 Pat17_PNPLA8_PNPLA9_li 36.3 25 0.00055 28.0 1.9 16 50-65 43-58 (329)
313 TIGR03100 hydr1_PEP hydrolase, 35.9 2E+02 0.0043 22.0 7.5 41 127-171 27-70 (274)
314 PRK13938 phosphoheptose isomer 35.4 79 0.0017 23.2 4.2 25 45-69 44-68 (196)
315 PRK13936 phosphoheptose isomer 35.3 96 0.0021 22.6 4.7 26 44-69 41-66 (197)
316 PRK00414 gmhA phosphoheptose i 35.0 90 0.0019 22.7 4.5 42 16-69 26-67 (192)
317 COG2845 Uncharacterized protei 34.4 1.6E+02 0.0035 23.7 5.9 26 44-69 114-139 (354)
318 PLN02385 hydrolase; alpha/beta 34.2 1.8E+02 0.0039 23.1 6.5 62 127-192 88-150 (349)
319 cd03379 beta_CA_cladeD Carboni 33.8 54 0.0012 22.6 3.0 28 19-59 41-68 (142)
320 COG1752 RssA Predicted esteras 33.3 34 0.00073 26.9 2.1 21 47-67 39-59 (306)
321 KOG0256 1-aminocyclopropane-1- 32.8 3E+02 0.0064 23.1 11.4 48 12-69 122-169 (471)
322 PRK05441 murQ N-acetylmuramic 32.8 1.4E+02 0.003 23.6 5.4 55 17-83 45-100 (299)
323 PRK15001 SAM-dependent 23S rib 32.7 56 0.0012 26.7 3.3 47 9-65 17-63 (378)
324 COG0466 Lon ATP-dependent Lon 32.7 1.7E+02 0.0036 26.4 6.2 50 17-70 637-696 (782)
325 PTZ00472 serine carboxypeptida 32.6 1.4E+02 0.0031 25.1 5.8 24 128-151 366-391 (462)
326 TIGR03607 patatin-related prot 32.2 33 0.00071 30.8 2.0 18 49-66 68-85 (739)
327 TIGR00128 fabD malonyl CoA-acy 32.1 69 0.0015 24.6 3.7 20 47-66 83-102 (290)
328 PRK05629 hypothetical protein; 31.9 67 0.0014 25.4 3.6 42 125-167 4-46 (318)
329 PF03575 Peptidase_S51: Peptid 31.5 18 0.00038 25.3 0.2 12 49-60 70-81 (154)
330 PF14258 DUF4350: Domain of un 31.3 56 0.0012 19.1 2.4 50 143-194 7-62 (70)
331 cd07206 Pat_TGL3-4-5_SDP1 Tria 31.3 36 0.00078 26.9 1.9 19 50-68 100-118 (298)
332 TIGR03131 malonate_mdcH malona 30.4 97 0.0021 24.0 4.3 19 47-65 76-94 (295)
333 cd07023 S49_Sppa_N_C Signal pe 30.2 77 0.0017 23.2 3.5 36 14-62 16-51 (208)
334 cd07231 Pat_SDP1-like Sugar-De 29.9 41 0.00088 26.9 2.0 18 50-67 99-116 (323)
335 cd07221 Pat_PNPLA3 Patatin-lik 29.3 43 0.00094 25.7 2.0 20 49-68 34-53 (252)
336 PF10605 3HBOH: 3HB-oligomer h 29.2 2.4E+02 0.0053 24.9 6.5 40 48-92 286-325 (690)
337 PF13676 TIR_2: TIR domain; PD 29.0 75 0.0016 19.9 2.9 27 129-159 1-27 (102)
338 cd03378 beta_CA_cladeC Carboni 28.3 1.1E+02 0.0024 21.6 3.8 30 19-61 77-106 (154)
339 TIGR03127 RuMP_HxlB 6-phospho 28.2 1.5E+02 0.0031 21.0 4.6 25 46-70 30-54 (179)
340 COG4519 Uncharacterized protei 28.1 1.5E+02 0.0033 18.3 3.9 47 143-192 39-87 (95)
341 PF13242 Hydrolase_like: HAD-h 28.0 71 0.0015 18.9 2.5 36 44-90 19-55 (75)
342 PLN02994 1-aminocyclopropane-1 28.0 1.8E+02 0.004 20.3 4.9 37 44-88 115-151 (153)
343 cd05007 SIS_Etherase N-acetylm 27.8 2.3E+02 0.005 21.7 5.8 55 17-83 32-87 (257)
344 cd07223 Pat_PNPLA5-mammals Pat 27.1 74 0.0016 26.3 3.1 20 48-67 42-61 (405)
345 COG3340 PepE Peptidase E [Amin 27.0 16 0.00035 27.3 -0.6 14 49-62 119-132 (224)
346 COG3675 Predicted lipase [Lipi 26.6 33 0.00072 27.0 1.0 20 47-66 175-194 (332)
347 PRK10886 DnaA initiator-associ 26.3 1.9E+02 0.004 21.3 4.8 24 45-68 40-63 (196)
348 PF07981 Plasmod_MYXSPDY: Plas 26.2 26 0.00057 14.5 0.2 6 2-7 4-9 (17)
349 PHA01735 hypothetical protein 26.2 62 0.0013 19.4 1.8 16 15-30 30-45 (76)
350 smart00827 PKS_AT Acyl transfe 26.0 1.2E+02 0.0027 23.3 4.2 19 48-66 83-101 (298)
351 PF00698 Acyl_transf_1: Acyl t 25.9 87 0.0019 24.6 3.3 37 127-169 156-192 (318)
352 cd01080 NAD_bind_m-THF_DH_Cycl 25.7 1.9E+02 0.0041 20.6 4.7 37 20-66 28-65 (168)
353 PRK14194 bifunctional 5,10-met 25.2 1.6E+02 0.0035 23.3 4.6 24 44-67 157-182 (301)
354 cd05006 SIS_GmhA Phosphoheptos 24.1 2E+02 0.0044 20.3 4.7 41 16-68 15-55 (177)
355 cd00394 Clp_protease_like Case 24.1 2E+02 0.0043 19.9 4.6 37 14-63 10-46 (161)
356 COG5023 Tubulin [Cytoskeleton] 24.1 1.7E+02 0.0038 24.0 4.5 58 15-87 111-172 (443)
357 cd00286 Tubulin_FtsZ Tubulin/F 23.9 2.5E+02 0.0054 22.3 5.6 58 16-88 71-132 (328)
358 PRK14875 acetoin dehydrogenase 23.9 3.4E+02 0.0073 21.4 6.4 62 126-193 131-192 (371)
359 KOG4150 Predicted ATP-dependen 23.8 2.3E+02 0.005 25.0 5.4 42 126-169 898-942 (1034)
360 PF08282 Hydrolase_3: haloacid 23.7 98 0.0021 22.7 3.1 26 21-57 188-213 (254)
361 PF00091 Tubulin: Tubulin/FtsZ 23.4 2.4E+02 0.0053 20.8 5.1 42 44-87 121-166 (216)
362 PF09904 HTH_43: Winged helix- 23.3 1.7E+02 0.0036 18.7 3.5 48 143-193 38-87 (90)
363 PF01494 FAD_binding_3: FAD bi 22.9 1.2E+02 0.0027 23.5 3.7 21 48-68 3-23 (356)
364 cd03413 CbiK_C Anaerobic cobal 22.2 1E+02 0.0022 20.0 2.5 33 128-162 63-98 (103)
365 cd05005 SIS_PHI Hexulose-6-pho 21.9 2.6E+02 0.0057 19.7 4.9 24 46-69 33-56 (179)
366 COG3621 Patatin [General funct 21.8 61 0.0013 26.1 1.6 21 50-70 45-65 (394)
367 KOG1578 Predicted carbonic anh 21.8 52 0.0011 25.5 1.2 36 20-68 140-175 (276)
368 cd03129 GAT1_Peptidase_E_like 21.7 68 0.0015 23.5 1.9 18 47-64 113-130 (210)
369 COG0376 KatG Catalase (peroxid 21.5 1.4E+02 0.003 25.9 3.6 45 4-57 492-540 (730)
370 PF01339 CheB_methylest: CheB 21.2 71 0.0015 23.1 1.8 19 49-67 1-19 (182)
371 cd00860 ThrRS_anticodon ThrRS 21.1 2E+02 0.0044 17.2 4.1 25 136-162 10-34 (91)
372 KOG1643 Triosephosphate isomer 21.0 1E+02 0.0022 23.0 2.5 48 11-67 174-222 (247)
373 TIGR02690 resist_ArsH arsenica 21.0 1.6E+02 0.0034 22.1 3.7 15 44-59 126-140 (219)
374 PRK10673 acyl-CoA esterase; Pr 20.9 3.4E+02 0.0074 19.8 6.8 60 127-193 17-76 (255)
375 PF10516 SHNi-TPR: SHNi-TPR; 20.9 84 0.0018 16.3 1.6 20 11-30 15-34 (38)
376 TIGR03230 lipo_lipase lipoprot 20.5 5.3E+02 0.011 21.8 6.9 43 126-168 41-85 (442)
377 PLN02752 [acyl-carrier protein 20.4 73 0.0016 25.5 1.9 17 50-66 127-143 (343)
378 TIGR01485 SPP_plant-cyano sucr 20.3 1.2E+02 0.0027 22.7 3.1 24 22-56 170-193 (249)
No 1
>KOG1515 consensus Arylacetamide deacetylase [Defense mechanisms]
Probab=100.00 E-value=1.2e-33 Score=219.91 Aligned_cols=184 Identities=39% Similarity=0.644 Sum_probs=160.1
Q ss_pred CCCcCCCCCCCCCCchHHHHHHHHHHHHHh-ccCCCCCCCCCCCCCCCceEEeeccchHHHHHHHHHHhccCCCCCCcee
Q 039671 1 VSVEYGLFPDRPIPACYEDSWAALNWVASH-AGGNGPEPWLNDHADFGRVFIGGGSAGGNIAHTLAFQVGSIGLPRVKLV 79 (195)
Q Consensus 1 ~~~~Yrlap~~~~p~~~~D~~~a~~~l~~~-~~~~~~~~~~~~~~d~~~i~l~G~S~Gg~la~~~a~~~~~~~~~~~~~~ 79 (195)
||+|||||||++||++++|..+|+.|+.++ ..+++ .|++||+|+|+|+|||+|..++.+..+......+++
T Consensus 127 vSVdYRLAPEh~~Pa~y~D~~~Al~w~~~~~~~~~~--------~D~~rv~l~GDSaGGNia~~va~r~~~~~~~~~ki~ 198 (336)
T KOG1515|consen 127 VSVDYRLAPEHPFPAAYDDGWAALKWVLKNSWLKLG--------ADPSRVFLAGDSAGGNIAHVVAQRAADEKLSKPKIK 198 (336)
T ss_pred EecCcccCCCCCCCccchHHHHHHHHHHHhHHHHhC--------CCcccEEEEccCccHHHHHHHHHHHhhccCCCcceE
Confidence 589999999999999999999999999998 55555 999999999999999999999999886543345999
Q ss_pred EEEeeccccCCCCcc------------------HHHHHHhhCCCCC-CCCCCCCCC-C-h--hhhcccCCCCEEEEEcCC
Q 039671 80 GVIMVHPFFGGTSPE------------------EDEMWLYMCPTNG-GLQDPRLKP-P-A--EDLARLGCERVLIFVAEK 136 (195)
Q Consensus 80 ~~i~~~p~~~~~~~~------------------~~~~~~~~~~~~~-~~~~~~~~p-~-~--~~~~~~~~pp~~i~~g~~ 136 (195)
|.|+++|++...+.. .+.+|..++|... ..+++.++| . . .+.....+||++++.++.
T Consensus 199 g~ili~P~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~w~~~lP~~~~~~~~p~~np~~~~~~~d~~~~~lp~tlv~~ag~ 278 (336)
T KOG1515|consen 199 GQILIYPFFQGTDRTESEKQQNLNGSPELARPKIDKWWRLLLPNGKTDLDHPFINPVGNSLAKDLSGLGLPPTLVVVAGY 278 (336)
T ss_pred EEEEEecccCCCCCCCHHHHHhhcCCcchhHHHHHHHHHHhCCCCCCCcCCccccccccccccCccccCCCceEEEEeCc
Confidence 999999999876543 4567777878766 677888888 2 2 345566789999999999
Q ss_pred ccchhhHHHHHHHHHhcCCCccEEEEEecCCCccccccCCCchHHHHHHHHHHHHHHh
Q 039671 137 DFLKPVAMNYYEDLKKSGWKGTVELVETHGEGHSFYFDNLKCEKAVELINKFVSFITQ 194 (195)
Q Consensus 137 D~l~~~~~~~~~~l~~~~~g~~~~~~~~~g~~H~f~~~~~~~~~~~~~~~~~~~fl~~ 194 (195)
|.+++++..++++|++. |+++++..++++.|+|....+..+.+.+.++.+.+|+++
T Consensus 279 D~L~D~~~~Y~~~Lkk~--Gv~v~~~~~e~~~H~~~~~~~~~~~a~~~~~~i~~fi~~ 334 (336)
T KOG1515|consen 279 DVLRDEGLAYAEKLKKA--GVEVTLIHYEDGFHGFHILDPSSKEAHALMDAIVEFIKS 334 (336)
T ss_pred hhhhhhhHHHHHHHHHc--CCeEEEEEECCCeeEEEecCCchhhHHHHHHHHHHHHhh
Confidence 99999999999999999 899999999999999999987778899999999999986
No 2
>PRK10162 acetyl esterase; Provisional
Probab=100.00 E-value=2e-32 Score=215.05 Aligned_cols=183 Identities=20% Similarity=0.221 Sum_probs=150.5
Q ss_pred CCCcCCCCCCCCCCchHHHHHHHHHHHHHhccCCCCCCCCCCCCCCCceEEeeccchHHHHHHHHHHhccCCCCCCceeE
Q 039671 1 VSVEYGLFPDRPIPACYEDSWAALNWVASHAGGNGPEPWLNDHADFGRVFIGGGSAGGNIAHTLAFQVGSIGLPRVKLVG 80 (195)
Q Consensus 1 ~~~~Yrlap~~~~p~~~~D~~~a~~~l~~~~~~~~~~~~~~~~~d~~~i~l~G~S~Gg~la~~~a~~~~~~~~~~~~~~~ 80 (195)
+++|||++|++++|.+++|+.++++|+.++..+++ +|+++|+|+|+|+||+||+.++.+..+.+.++..+++
T Consensus 116 v~vdYrlape~~~p~~~~D~~~a~~~l~~~~~~~~--------~d~~~i~l~G~SaGG~la~~~a~~~~~~~~~~~~~~~ 187 (318)
T PRK10162 116 IGIDYTLSPEARFPQAIEEIVAVCCYFHQHAEDYG--------INMSRIGFAGDSAGAMLALASALWLRDKQIDCGKVAG 187 (318)
T ss_pred EEecCCCCCCCCCCCcHHHHHHHHHHHHHhHHHhC--------CChhHEEEEEECHHHHHHHHHHHHHHhcCCCccChhh
Confidence 47899999999999999999999999999988887 8999999999999999999999887665543457899
Q ss_pred EEeeccccCCCCcc----------------HHHHHHhhCCCCCCCCCCCCCCChhhhcccCCCCEEEEEcCCccchhhHH
Q 039671 81 VIMVHPFFGGTSPE----------------EDEMWLYMCPTNGGLQDPRLKPPAEDLARLGCERVLIFVAEKDFLKPVAM 144 (195)
Q Consensus 81 ~i~~~p~~~~~~~~----------------~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~pp~~i~~g~~D~l~~~~~ 144 (195)
+++++|+++..... ..+++..+.+.......+..+|...++. ..+||++|++|+.|+++++++
T Consensus 188 ~vl~~p~~~~~~~~s~~~~~~~~~~l~~~~~~~~~~~y~~~~~~~~~p~~~p~~~~l~-~~lPp~~i~~g~~D~L~de~~ 266 (318)
T PRK10162 188 VLLWYGLYGLRDSVSRRLLGGVWDGLTQQDLQMYEEAYLSNDADRESPYYCLFNNDLT-RDVPPCFIAGAEFDPLLDDSR 266 (318)
T ss_pred eEEECCccCCCCChhHHHhCCCccccCHHHHHHHHHHhCCCccccCCcccCcchhhhh-cCCCCeEEEecCCCcCcChHH
Confidence 99999998764221 2233444544433334456666334441 135899999999999999999
Q ss_pred HHHHHHHhcCCCccEEEEEecCCCccccccCCCchHHHHHHHHHHHHHHh
Q 039671 145 NYYEDLKKSGWKGTVELVETHGEGHSFYFDNLKCEKAVELINKFVSFITQ 194 (195)
Q Consensus 145 ~~~~~l~~~~~g~~~~~~~~~g~~H~f~~~~~~~~~~~~~~~~~~~fl~~ 194 (195)
.|+++|+++ |+++++++++|+.|+|.......++++++++++.+||++
T Consensus 267 ~~~~~L~~a--Gv~v~~~~~~g~~H~f~~~~~~~~~a~~~~~~~~~~l~~ 314 (318)
T PRK10162 267 LLYQTLAAH--QQPCEFKLYPGTLHAFLHYSRMMDTADDALRDGAQFFTA 314 (318)
T ss_pred HHHHHHHHc--CCCEEEEEECCCceehhhccCchHHHHHHHHHHHHHHHH
Confidence 999999999 899999999999999988877778899999999999986
No 3
>COG0657 Aes Esterase/lipase [Lipid metabolism]
Probab=99.97 E-value=1e-30 Score=205.07 Aligned_cols=178 Identities=30% Similarity=0.432 Sum_probs=149.4
Q ss_pred CCCcCCCCCCCCCCchHHHHHHHHHHHHHhccCCCCCCCCCCCCCCCceEEeeccchHHHHHHHHHHhccCCCCCCceeE
Q 039671 1 VSVEYGLFPDRPIPACYEDSWAALNWVASHAGGNGPEPWLNDHADFGRVFIGGGSAGGNIAHTLAFQVGSIGLPRVKLVG 80 (195)
Q Consensus 1 ~~~~Yrlap~~~~p~~~~D~~~a~~~l~~~~~~~~~~~~~~~~~d~~~i~l~G~S~Gg~la~~~a~~~~~~~~~~~~~~~ 80 (195)
+++||||+|+++||.+++|+.++++|+.++..+++ +|+++|+|+|+|+||+||+.++...++.+.+ .+++
T Consensus 114 v~vdYrlaPe~~~p~~~~d~~~a~~~l~~~~~~~g--------~dp~~i~v~GdSAGG~La~~~a~~~~~~~~~--~p~~ 183 (312)
T COG0657 114 VSVDYRLAPEHPFPAALEDAYAAYRWLRANAAELG--------IDPSRIAVAGDSAGGHLALALALAARDRGLP--LPAA 183 (312)
T ss_pred EecCCCCCCCCCCCchHHHHHHHHHHHHhhhHhhC--------CCccceEEEecCcccHHHHHHHHHHHhcCCC--CceE
Confidence 57999999999999999999999999999988888 9999999999999999999999998876555 8899
Q ss_pred EEeeccccCCCC-cc----------------HHHHHHhhCCCCCCCCCCCCCC-ChhhhcccCCCCEEEEEcCCccchhh
Q 039671 81 VIMVHPFFGGTS-PE----------------EDEMWLYMCPTNGGLQDPRLKP-PAEDLARLGCERVLIFVAEKDFLKPV 142 (195)
Q Consensus 81 ~i~~~p~~~~~~-~~----------------~~~~~~~~~~~~~~~~~~~~~p-~~~~~~~~~~pp~~i~~g~~D~l~~~ 142 (195)
.++++|+++... .. ...+...+.........+..+| ....+.+ +||++|++|+.|+++++
T Consensus 184 ~~li~P~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~spl~~~~~~~--lPP~~i~~a~~D~l~~~ 261 (312)
T COG0657 184 QVLISPLLDLTSSAASLPGYGEADLLDAAAILAWFADLYLGAAPDREDPEASPLASDDLSG--LPPTLIQTAEFDPLRDE 261 (312)
T ss_pred EEEEecccCCcccccchhhcCCccccCHHHHHHHHHHHhCcCccccCCCccCccccccccC--CCCEEEEecCCCcchhH
Confidence 999999999875 11 2244445544444444567888 3333444 58999999999999999
Q ss_pred HHHHHHHHHhcCCCccEEEEEecCCCccccccCCCchHHHHHHHHHHHHHHh
Q 039671 143 AMNYYEDLKKSGWKGTVELVETHGEGHSFYFDNLKCEKAVELINKFVSFITQ 194 (195)
Q Consensus 143 ~~~~~~~l~~~~~g~~~~~~~~~g~~H~f~~~~~~~~~~~~~~~~~~~fl~~ 194 (195)
++.|+++|+++ |+++++..++|+.|+|..... +.+.+.+.++.+|+++
T Consensus 262 ~~~~a~~L~~a--gv~~~~~~~~g~~H~f~~~~~--~~a~~~~~~~~~~l~~ 309 (312)
T COG0657 262 GEAYAERLRAA--GVPVELRVYPGMIHGFDLLTG--PEARSALRQIAAFLRA 309 (312)
T ss_pred HHHHHHHHHHc--CCeEEEEEeCCcceeccccCc--HHHHHHHHHHHHHHHH
Confidence 99999999999 899999999999999977655 6778888888888863
No 4
>PF07859 Abhydrolase_3: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases.; InterPro: IPR013094 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents the catalytic domain fold-3 of alpha/beta hydrolase. ; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 3D7R_B 2C7B_B 3ZWQ_B 2YH2_B 3BXP_A 3D3N_A 1LZK_A 1LZL_A 2O7V_A 2O7R_A ....
Probab=99.97 E-value=3e-31 Score=197.03 Aligned_cols=157 Identities=36% Similarity=0.564 Sum_probs=126.8
Q ss_pred CCCcCCCCCCCCCCchHHHHHHHHHHHHHhccCCCCCCCCCCCCCCCceEEeeccchHHHHHHHHHHhccCCCCCCceeE
Q 039671 1 VSVEYGLFPDRPIPACYEDSWAALNWVASHAGGNGPEPWLNDHADFGRVFIGGGSAGGNIAHTLAFQVGSIGLPRVKLVG 80 (195)
Q Consensus 1 ~~~~Yrlap~~~~p~~~~D~~~a~~~l~~~~~~~~~~~~~~~~~d~~~i~l~G~S~Gg~la~~~a~~~~~~~~~~~~~~~ 80 (195)
++++|||+|++++|++++|+.++++|+.+++.+++ .|+++|+|+|+|+||+||+.++.+..+.+.+ .+++
T Consensus 33 ~~~~Yrl~p~~~~p~~~~D~~~a~~~l~~~~~~~~--------~d~~~i~l~G~SAGg~la~~~~~~~~~~~~~--~~~~ 102 (211)
T PF07859_consen 33 VSIDYRLAPEAPFPAALEDVKAAYRWLLKNADKLG--------IDPERIVLIGDSAGGHLALSLALRARDRGLP--KPKG 102 (211)
T ss_dssp EEEE---TTTSSTTHHHHHHHHHHHHHHHTHHHHT--------EEEEEEEEEEETHHHHHHHHHHHHHHHTTTC--HESE
T ss_pred EEeeccccccccccccccccccceeeecccccccc--------ccccceEEeecccccchhhhhhhhhhhhccc--chhh
Confidence 47899999999999999999999999999987777 8999999999999999999999988876544 7999
Q ss_pred EEeeccccCC-CCcc-------------------HHHHHHhhCCCCCCCCCCCCCC-ChhhhcccCCCCEEEEEcCCccc
Q 039671 81 VIMVHPFFGG-TSPE-------------------EDEMWLYMCPTNGGLQDPRLKP-PAEDLARLGCERVLIFVAEKDFL 139 (195)
Q Consensus 81 ~i~~~p~~~~-~~~~-------------------~~~~~~~~~~~~~~~~~~~~~p-~~~~~~~~~~pp~~i~~g~~D~l 139 (195)
++++||++++ .... ...++..+.+ ......+.++| ...+++ .+||++|++|+.|++
T Consensus 103 ~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~sp~~~~~~~--~~Pp~~i~~g~~D~l 179 (211)
T PF07859_consen 103 IILISPWTDLQDFDGPSYDDSNENKDDPFLPAPKIDWFWKLYLP-GSDRDDPLASPLNASDLK--GLPPTLIIHGEDDVL 179 (211)
T ss_dssp EEEESCHSSTSTSSCHHHHHHHHHSTTSSSBHHHHHHHHHHHHS-TGGTTSTTTSGGGSSCCT--TCHEEEEEEETTSTT
T ss_pred hhcccccccchhcccccccccccccccccccccccccccccccc-cccccccccccccccccc--cCCCeeeeccccccc
Confidence 9999999877 2211 2334444444 33445677888 222333 368999999999999
Q ss_pred hhhHHHHHHHHHhcCCCccEEEEEecCCCcccc
Q 039671 140 KPVAMNYYEDLKKSGWKGTVELVETHGEGHSFY 172 (195)
Q Consensus 140 ~~~~~~~~~~l~~~~~g~~~~~~~~~g~~H~f~ 172 (195)
++++..|+++|++. |+++++++++|+.|+|.
T Consensus 180 ~~~~~~~~~~L~~~--gv~v~~~~~~g~~H~f~ 210 (211)
T PF07859_consen 180 VDDSLRFAEKLKKA--GVDVELHVYPGMPHGFF 210 (211)
T ss_dssp HHHHHHHHHHHHHT--T-EEEEEEETTEETTGG
T ss_pred hHHHHHHHHHHHHC--CCCEEEEEECCCeEEee
Confidence 99999999999999 89999999999999885
No 5
>PF00326 Peptidase_S9: Prolyl oligopeptidase family This family belongs to family S9 of the peptidase classification.; InterPro: IPR001375 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain covers the active site serine of the serine peptidases belonging to MEROPS peptidase family S9 (prolyl oligopeptidase family, clan SC). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Examples of protein families containing this domain are: Prolyl endopeptidase (3.4.21.26 from EC) (PE) (also called post-proline cleaving enzyme). PE is an enzyme that cleaves peptide bonds on the C-terminal side of prolyl residues. The sequence of PE has been obtained from a mammalian species (pig) and from bacteria (Flavobacterium meningosepticum and Aeromonas hydrophila); there is a high degree of sequence conservation between these sequences. Escherichia coli protease II (3.4.21.83 from EC) (oligopeptidase B) (gene prtB) which cleaves peptide bonds on the C-terminal side of lysyl and argininyl residues. Dipeptidyl peptidase IV (3.4.14.5 from EC) (DPP IV). DPP IV is an enzyme that removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline. Saccharomyces cerevisiae (Baker's yeast) vacuolar dipeptidyl aminopeptidases A and B (DPAP A and DPAP B), encoded by the STE13 and DAP2 genes respectively. DPAP A is responsible for the proteolytic maturation of the alpha-factor precursor. Acylamino-acid-releasing enzyme (3.4.19.1 from EC) (acyl-peptide hydrolase). This enzyme catalyses the hydrolysis of the amino-terminal peptide bond of an N-acetylated protein to generate a N-acetylated amino acid and a protein with a free amino-terminus. These proteins belong to MEROPS peptidase families S9A, S9B and S9C.; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 2AJ8_D 1ORV_D 2AJB_C 2BUC_D 1ORW_D 2AJC_D 2AJD_C 2BUA_A 2HU8_B 3O4J_B ....
Probab=99.86 E-value=2.4e-21 Score=144.08 Aligned_cols=169 Identities=21% Similarity=0.145 Sum_probs=117.9
Q ss_pred CCcCCCCCC----------CCC-CchHHHHHHHHHHHHHhccCCCCCCCCCCCCCCCceEEeeccchHHHHHHHHHHhcc
Q 039671 2 SVEYGLFPD----------RPI-PACYEDSWAALNWVASHAGGNGPEPWLNDHADFGRVFIGGGSAGGNIAHTLAFQVGS 70 (195)
Q Consensus 2 ~~~Yrlap~----------~~~-p~~~~D~~~a~~~l~~~~~~~~~~~~~~~~~d~~~i~l~G~S~Gg~la~~~a~~~~~ 70 (195)
.+|||-.+. ..+ ...++|+.++++|+.++.. +|++||+|+|+|+||++|+.++.+.++
T Consensus 19 ~~~~rGs~g~g~~~~~~~~~~~~~~~~~D~~~~i~~l~~~~~-----------iD~~ri~i~G~S~GG~~a~~~~~~~~~ 87 (213)
T PF00326_consen 19 VPNYRGSGGYGKDFHEAGRGDWGQADVDDVVAAIEYLIKQYY-----------IDPDRIGIMGHSYGGYLALLAATQHPD 87 (213)
T ss_dssp EEE-TTSSSSHHHHHHTTTTGTTHHHHHHHHHHHHHHHHTTS-----------EEEEEEEEEEETHHHHHHHHHHHHTCC
T ss_pred EEcCCCCCccchhHHHhhhccccccchhhHHHHHHHHhcccc-----------ccceeEEEEcccccccccchhhcccce
Confidence 467776652 222 2468999999999988863 899999999999999999999987654
Q ss_pred CCCCCCceeEEEeeccccCCCCccHHH--H---HHhhCCCCCCCC--CCCCCCChhhhccc-CCCCEEEEEcCCccch--
Q 039671 71 IGLPRVKLVGVIMVHPFFGGTSPEEDE--M---WLYMCPTNGGLQ--DPRLKPPAEDLARL-GCERVLIFVAEKDFLK-- 140 (195)
Q Consensus 71 ~~~~~~~~~~~i~~~p~~~~~~~~~~~--~---~~~~~~~~~~~~--~~~~~p~~~~~~~~-~~pp~~i~~g~~D~l~-- 140 (195)
.++++++.+|+++........ + +....+...... ....+|. ..+... ..||+||+||+.|..+
T Consensus 88 ------~f~a~v~~~g~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~-~~~~~~~~~~P~li~hG~~D~~Vp~ 160 (213)
T PF00326_consen 88 ------RFKAAVAGAGVSDLFSYYGTTDIYTKAEYLEYGDPWDNPEFYRELSPI-SPADNVQIKPPVLIIHGENDPRVPP 160 (213)
T ss_dssp ------GSSEEEEESE-SSTTCSBHHTCCHHHGHHHHHSSTTTSHHHHHHHHHG-GGGGGCGGGSEEEEEEETTBSSSTT
T ss_pred ------eeeeeeccceecchhcccccccccccccccccCccchhhhhhhhhccc-cccccccCCCCEEEEccCCCCccCH
Confidence 789999999999987655321 1 111112110100 1112230 111110 2368999999999877
Q ss_pred hhHHHHHHHHHhcCCCccEEEEEecCCCccccccCCCchHHHHHHHHHHHHHHh
Q 039671 141 PVAMNYYEDLKKSGWKGTVELVETHGEGHSFYFDNLKCEKAVELINKFVSFITQ 194 (195)
Q Consensus 141 ~~~~~~~~~l~~~~~g~~~~~~~~~g~~H~f~~~~~~~~~~~~~~~~~~~fl~~ 194 (195)
.++.+++++|++. |++++++++|+++|+|... ....++.+++.+|+++
T Consensus 161 ~~s~~~~~~L~~~--g~~~~~~~~p~~gH~~~~~----~~~~~~~~~~~~f~~~ 208 (213)
T PF00326_consen 161 SQSLRLYNALRKA--GKPVELLIFPGEGHGFGNP----ENRRDWYERILDFFDK 208 (213)
T ss_dssp HHHHHHHHHHHHT--TSSEEEEEETT-SSSTTSH----HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhc--CCCEEEEEcCcCCCCCCCc----hhHHHHHHHHHHHHHH
Confidence 5799999999999 8999999999999977433 3345888899999986
No 6
>COG1506 DAP2 Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Amino acid transport and metabolism]
Probab=99.76 E-value=3.7e-18 Score=144.87 Aligned_cols=154 Identities=21% Similarity=0.168 Sum_probs=114.6
Q ss_pred CchHHHHHHHHHHHHHhccCCCCCCCCCCCCCCCceEEeeccchHHHHHHHHHHhccCCCCCCceeEEEeeccccCCCCc
Q 039671 14 PACYEDSWAALNWVASHAGGNGPEPWLNDHADFGRVFIGGGSAGGNIAHTLAFQVGSIGLPRVKLVGVIMVHPFFGGTSP 93 (195)
Q Consensus 14 p~~~~D~~~a~~~l~~~~~~~~~~~~~~~~~d~~~i~l~G~S~Gg~la~~~a~~~~~~~~~~~~~~~~i~~~p~~~~~~~ 93 (195)
-..++|+.++++|+.+... +|++||+|+|+|.||+|++.++.+.+ .+++++...+.++....
T Consensus 451 ~~~~~D~~~~~~~l~~~~~-----------~d~~ri~i~G~SyGGymtl~~~~~~~-------~f~a~~~~~~~~~~~~~ 512 (620)
T COG1506 451 GVDLEDLIAAVDALVKLPL-----------VDPERIGITGGSYGGYMTLLAATKTP-------RFKAAVAVAGGVDWLLY 512 (620)
T ss_pred CccHHHHHHHHHHHHhCCC-----------cChHHeEEeccChHHHHHHHHHhcCc-------hhheEEeccCcchhhhh
Confidence 4688999999999987754 89999999999999999999999864 67888877776554322
Q ss_pred c---HHHH---HHhhCCCC--CCCCCCCCCC--ChhhhcccCCCCEEEEEcCCccch--hhHHHHHHHHHhcCCCccEEE
Q 039671 94 E---EDEM---WLYMCPTN--GGLQDPRLKP--PAEDLARLGCERVLIFVAEKDFLK--PVAMNYYEDLKKSGWKGTVEL 161 (195)
Q Consensus 94 ~---~~~~---~~~~~~~~--~~~~~~~~~p--~~~~~~~~~~pp~~i~~g~~D~l~--~~~~~~~~~l~~~~~g~~~~~ 161 (195)
. ...+ +....... ........|| ....++. |+||+||++|..+ ++++.|.++|++. |+++++
T Consensus 513 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~i~~----P~LliHG~~D~~v~~~q~~~~~~aL~~~--g~~~~~ 586 (620)
T COG1506 513 FGESTEGLRFDPEENGGGPPEDREKYEDRSPIFYADNIKT----PLLLIHGEEDDRVPIEQAEQLVDALKRK--GKPVEL 586 (620)
T ss_pred ccccchhhcCCHHHhCCCcccChHHHHhcChhhhhcccCC----CEEEEeecCCccCChHHHHHHHHHHHHc--CceEEE
Confidence 2 1111 11111111 1223456677 4344443 7999999999766 6899999999999 899999
Q ss_pred EEecCCCccccccCCCchHHHHHHHHHHHHHHhC
Q 039671 162 VETHGEGHSFYFDNLKCEKAVELINKFVSFITQL 195 (195)
Q Consensus 162 ~~~~g~~H~f~~~~~~~~~~~~~~~~~~~fl~~~ 195 (195)
++||+.+|.|... ....+.++++++|++++
T Consensus 587 ~~~p~e~H~~~~~----~~~~~~~~~~~~~~~~~ 616 (620)
T COG1506 587 VVFPDEGHGFSRP----ENRVKVLKEILDWFKRH 616 (620)
T ss_pred EEeCCCCcCCCCc----hhHHHHHHHHHHHHHHH
Confidence 9999999988652 45678889999999864
No 7
>KOG4388 consensus Hormone-sensitive lipase HSL [Lipid transport and metabolism]
Probab=99.74 E-value=1.4e-17 Score=134.61 Aligned_cols=78 Identities=29% Similarity=0.547 Sum_probs=68.9
Q ss_pred CCCcCCCCCCCCCCchHHHHHHHHHHHHHhccCCCCCCCCCCCCCCCceEEeeccchHHHHHHHHHHhccCCCCCCceeE
Q 039671 1 VSVEYGLFPDRPIPACYEDSWAALNWVASHAGGNGPEPWLNDHADFGRVFIGGGSAGGNIAHTLAFQVGSIGLPRVKLVG 80 (195)
Q Consensus 1 ~~~~Yrlap~~~~p~~~~D~~~a~~~l~~~~~~~~~~~~~~~~~d~~~i~l~G~S~Gg~la~~~a~~~~~~~~~~~~~~~ 80 (195)
+|+||.||||++||.+++++.-|+-|+.++..-+| .-.+||+++|+|+||||+..++.+.-..+.. .+.|
T Consensus 431 iSVdYSLAPEaPFPRaleEv~fAYcW~inn~allG--------~TgEriv~aGDSAGgNL~~~VaLr~i~~gvR--vPDG 500 (880)
T KOG4388|consen 431 ISVDYSLAPEAPFPRALEEVFFAYCWAINNCALLG--------STGERIVLAGDSAGGNLCFTVALRAIAYGVR--VPDG 500 (880)
T ss_pred EEeeeccCCCCCCCcHHHHHHHHHHHHhcCHHHhC--------cccceEEEeccCCCcceeehhHHHHHHhCCC--CCCc
Confidence 58999999999999999999999999999988787 7889999999999999999998887666653 6788
Q ss_pred EEeecccc
Q 039671 81 VIMVHPFF 88 (195)
Q Consensus 81 ~i~~~p~~ 88 (195)
+++.|+.+
T Consensus 501 l~laY~pt 508 (880)
T KOG4388|consen 501 LMLAYPPT 508 (880)
T ss_pred eEEecChh
Confidence 88877654
No 8
>PF10340 DUF2424: Protein of unknown function (DUF2424); InterPro: IPR019436 Sterol homeostasis in eukaryotic cells relies on the reciprocal interconversion of free sterols and steryl esters. In Saccharomyces cerevisiae (Baker's yeast) sterol acetylation requires the acetyltransferase Atf2, whereas deacetylation requires Say1, a membrane-anchored deacetylase with a putative active site in the ER lumen. Lack of Say1 results in the secretion of acetylated sterols into the culture medium, indicating that the substrate specificity of Say1 determines whether acetylated sterols are secreted from the cells or whether they are deacetylated and retained. In S. cerevisiae cells lacking Say1 or Atf2 are sensitive against the plant-derived allylbenzene eugenol and both Say1 and Atf2 affect pregnenolone toxicity, indicating that lipid acetylation acts as a detoxification pathway []. Homologues of Say1 are present in the mammalian genome and can functionally substitute for Say1 in yeast demonstrating that part of this pathway has been evolutionarily conserved [].
Probab=99.73 E-value=1.1e-16 Score=125.83 Aligned_cols=158 Identities=15% Similarity=0.162 Sum_probs=111.3
Q ss_pred CCCcCCCCC----CCCCCchHHHHHHHHHHHHHhccCCCCCCCCCCCCCCCceEEeeccchHHHHHHHHHHhccCCCCCC
Q 039671 1 VSVEYGLFP----DRPIPACYEDSWAALNWVASHAGGNGPEPWLNDHADFGRVFIGGGSAGGNIAHTLAFQVGSIGLPRV 76 (195)
Q Consensus 1 ~~~~Yrlap----~~~~p~~~~D~~~a~~~l~~~~~~~~~~~~~~~~~d~~~i~l~G~S~Gg~la~~~a~~~~~~~~~~~ 76 (195)
+.+||.|++ .+.||.|+.++.+.+++|.+. ...++|.|+|+||||+|++.+......... .+
T Consensus 158 LvLDYsLt~~~~~~~~yPtQL~qlv~~Y~~Lv~~-------------~G~~nI~LmGDSAGGnL~Ls~LqyL~~~~~-~~ 223 (374)
T PF10340_consen 158 LVLDYSLTSSDEHGHKYPTQLRQLVATYDYLVES-------------EGNKNIILMGDSAGGNLALSFLQYLKKPNK-LP 223 (374)
T ss_pred EEEeccccccccCCCcCchHHHHHHHHHHHHHhc-------------cCCCeEEEEecCccHHHHHHHHHHHhhcCC-CC
Confidence 358999999 689999999999999999965 235789999999999999988887765222 23
Q ss_pred ceeEEEeeccccCCCCc-------c-------------HHHHHHhhCCCCCCCCC----CCCCC----Chhhhccc-CCC
Q 039671 77 KLVGVIMVHPFFGGTSP-------E-------------EDEMWLYMCPTNGGLQD----PRLKP----PAEDLARL-GCE 127 (195)
Q Consensus 77 ~~~~~i~~~p~~~~~~~-------~-------------~~~~~~~~~~~~~~~~~----~~~~p----~~~~~~~~-~~p 127 (195)
.++.+|++|||+++... . ...+...+.+....... +...+ ..+.++.+ +--
T Consensus 224 ~Pk~~iLISPWv~l~~~~~~~~~~~~~n~~~D~l~~~~~~~~~~~y~~~~~~~~~~~~~~~~n~~~n~d~~~W~~I~~~~ 303 (374)
T PF10340_consen 224 YPKSAILISPWVNLVPQDSQEGSSYHDNEKRDMLSYKGLSMFGDAYIGNNDPENDLNSLPFVNIEYNFDAEDWKDILKKY 303 (374)
T ss_pred CCceeEEECCCcCCcCCCCCCCccccccccccccchhhHHHHHHhhccccccccccccCCccCcccCCChhHHHHhccCC
Confidence 68999999999987521 0 22333444444111111 11111 12233321 112
Q ss_pred CEEEEEcCCccchhhHHHHHHHHHhcCC---CccEEEEEecCCCcccc
Q 039671 128 RVLIFVAEKDFLKPVAMNYYEDLKKSGW---KGTVELVETHGEGHSFY 172 (195)
Q Consensus 128 p~~i~~g~~D~l~~~~~~~~~~l~~~~~---g~~~~~~~~~g~~H~f~ 172 (195)
.++|+.|+++.++++..+|++++...++ +...++.+-+++.|.-.
T Consensus 304 ~vfVi~Ge~EvfrddI~~~~~~~~~~~~~~~~~~~nv~~~~~G~Hi~P 351 (374)
T PF10340_consen 304 SVFVIYGEDEVFRDDILEWAKKLNDVKPNKFSNSNNVYIDEGGIHIGP 351 (374)
T ss_pred cEEEEECCccccHHHHHHHHHHHhhcCccccCCcceEEEecCCccccc
Confidence 5999999999999999999999997731 12468888999999543
No 9
>KOG4627 consensus Kynurenine formamidase [Amino acid transport and metabolism]
Probab=99.71 E-value=4.4e-18 Score=121.62 Aligned_cols=148 Identities=16% Similarity=0.196 Sum_probs=115.1
Q ss_pred CCCcCCCCCCC-CCCchHHHHHHHHHHHHHhccCCCCCCCCCCCCCCCceEEeeccchHHHHHHHHHHhccCCCCCCcee
Q 039671 1 VSVEYGLFPDR-PIPACYEDSWAALNWVASHAGGNGPEPWLNDHADFGRVFIGGGSAGGNIAHTLAFQVGSIGLPRVKLV 79 (195)
Q Consensus 1 ~~~~Yrlap~~-~~p~~~~D~~~a~~~l~~~~~~~~~~~~~~~~~d~~~i~l~G~S~Gg~la~~~a~~~~~~~~~~~~~~ 79 (195)
+|++|.|+|+. ++...+.|+...++|+.+.. -+.+.+.+.|||+|++||+.+.++..+ +++.
T Consensus 101 asvgY~l~~q~htL~qt~~~~~~gv~filk~~------------~n~k~l~~gGHSaGAHLa~qav~R~r~-----prI~ 163 (270)
T KOG4627|consen 101 ASVGYNLCPQVHTLEQTMTQFTHGVNFILKYT------------ENTKVLTFGGHSAGAHLAAQAVMRQRS-----PRIW 163 (270)
T ss_pred EEeccCcCcccccHHHHHHHHHHHHHHHHHhc------------ccceeEEEcccchHHHHHHHHHHHhcC-----chHH
Confidence 36899999997 88999999999999999875 366789999999999999999888764 4899
Q ss_pred EEEeeccccCCCCccHHHHHHhhCCCCCCCCCCCCCCChhhhcccCCCCEEEEEcCCcc--chhhHHHHHHHHHhcCCCc
Q 039671 80 GVIMVHPFFGGTSPEEDEMWLYMCPTNGGLQDPRLKPPAEDLARLGCERVLIFVAEKDF--LKPVAMNYYEDLKKSGWKG 157 (195)
Q Consensus 80 ~~i~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~pp~~i~~g~~D~--l~~~~~~~~~~l~~~~~g~ 157 (195)
|++++||++++.+.......... + -........|+....++++.+| ++++.|++|. ++++.+.|++.+.++
T Consensus 164 gl~l~~GvY~l~EL~~te~g~dl-g-Lt~~~ae~~Scdl~~~~~v~~~-ilVv~~~~espklieQnrdf~~q~~~a---- 236 (270)
T KOG4627|consen 164 GLILLCGVYDLRELSNTESGNDL-G-LTERNAESVSCDLWEYTDVTVW-ILVVAAEHESPKLIEQNRDFADQLRKA---- 236 (270)
T ss_pred HHHHHhhHhhHHHHhCCcccccc-C-cccchhhhcCccHHHhcCceee-eeEeeecccCcHHHHhhhhHHHHhhhc----
Confidence 99999999998654211111111 0 1222345567755556666666 9999999994 679999999999888
Q ss_pred cEEEEEecCCCccccccC
Q 039671 158 TVELVETHGEGHSFYFDN 175 (195)
Q Consensus 158 ~~~~~~~~g~~H~f~~~~ 175 (195)
++..|++.+| |.++.
T Consensus 237 --~~~~f~n~~h-y~I~~ 251 (270)
T KOG4627|consen 237 --SFTLFKNYDH-YDIIE 251 (270)
T ss_pred --ceeecCCcch-hhHHH
Confidence 8999999999 76654
No 10
>PF02230 Abhydrolase_2: Phospholipase/Carboxylesterase; InterPro: IPR003140 This entry represents the alpha/beta hydrolase domain found in phospholipases [], carboxylesterases [] and thioesterases.; GO: 0016787 hydrolase activity; PDB: 3U0V_A 1AUR_A 1AUO_B 1FJ2_B 3CN9_A 3CN7_A.
Probab=99.68 E-value=6.9e-16 Score=115.07 Aligned_cols=112 Identities=29% Similarity=0.406 Sum_probs=79.9
Q ss_pred CCCCceEEeeccchHHHHHHHHHHhccCCCCCCceeEEEeeccccCCCCccHHHHHHhhCCCCCCCCCCCCCCChhhhcc
Q 039671 44 ADFGRVFIGGGSAGGNIAHTLAFQVGSIGLPRVKLVGVIMVHPFFGGTSPEEDEMWLYMCPTNGGLQDPRLKPPAEDLAR 123 (195)
Q Consensus 44 ~d~~~i~l~G~S~Gg~la~~~a~~~~~~~~~~~~~~~~i~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~ 123 (195)
++++||+|+|+|.||.+|+.++.+.+. .+.|++++||++..... . . . .......
T Consensus 102 i~~~ri~l~GFSQGa~~al~~~l~~p~------~~~gvv~lsG~~~~~~~------------~-~---~----~~~~~~~ 155 (216)
T PF02230_consen 102 IDPSRIFLGGFSQGAAMALYLALRYPE------PLAGVVALSGYLPPESE------------L-E---D----RPEALAK 155 (216)
T ss_dssp --GGGEEEEEETHHHHHHHHHHHCTSS------TSSEEEEES---TTGCC------------C-H---C----CHCCCCT
T ss_pred CChhheehhhhhhHHHHHHHHHHHcCc------CcCEEEEeecccccccc------------c-c---c----cccccCC
Confidence 899999999999999999999998764 78999999998765221 0 0 0 0011112
Q ss_pred cCCCCEEEEEcCCccchh--hHHHHHHHHHhcCCCccEEEEEecCCCccccccCCCchHHHHHHHHHHHHHHhC
Q 039671 124 LGCERVLIFVAEKDFLKP--VAMNYYEDLKKSGWKGTVELVETHGEGHSFYFDNLKCEKAVELINKFVSFITQL 195 (195)
Q Consensus 124 ~~~pp~~i~~g~~D~l~~--~~~~~~~~l~~~~~g~~~~~~~~~g~~H~f~~~~~~~~~~~~~~~~~~~fl~~~ 195 (195)
.|++++||+.|++++ .++...+.|++. +.+++++.|+|++|.. ..+.++.+.+||+++
T Consensus 156 ---~pi~~~hG~~D~vvp~~~~~~~~~~L~~~--~~~v~~~~~~g~gH~i---------~~~~~~~~~~~l~~~ 215 (216)
T PF02230_consen 156 ---TPILIIHGDEDPVVPFEWAEKTAEFLKAA--GANVEFHEYPGGGHEI---------SPEELRDLREFLEKH 215 (216)
T ss_dssp ---S-EEEEEETT-SSSTHHHHHHHHHHHHCT--T-GEEEEEETT-SSS-----------HHHHHHHHHHHHHH
T ss_pred ---CcEEEEecCCCCcccHHHHHHHHHHHHhc--CCCEEEEEcCCCCCCC---------CHHHHHHHHHHHhhh
Confidence 279999999999885 488999999999 7899999999999944 357788888898763
No 11
>TIGR02821 fghA_ester_D S-formylglutathione hydrolase. This model describes a protein family from bacteria, yeast, and human, with a conserved critical role in formaldehyde detoxification as S-formylglutathione hydrolase (EC 3.1.2.12). Members in eukaryotes such as the human protein are better known as esterase D (EC 3.1.1.1), an enzyme with broad specificity, although S-formylglutathione hydrolase has now been demonstrated as well.
Probab=99.68 E-value=2.1e-15 Score=116.44 Aligned_cols=133 Identities=17% Similarity=0.164 Sum_probs=94.6
Q ss_pred CCCCceEEeeccchHHHHHHHHHHhccCCCCCCceeEEEeeccccCCCCcc-HHHHHHhhCCCCCCCCCCCCCC--Chhh
Q 039671 44 ADFGRVFIGGGSAGGNIAHTLAFQVGSIGLPRVKLVGVIMVHPFFGGTSPE-EDEMWLYMCPTNGGLQDPRLKP--PAED 120 (195)
Q Consensus 44 ~d~~~i~l~G~S~Gg~la~~~a~~~~~~~~~~~~~~~~i~~~p~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~p--~~~~ 120 (195)
+|.++++|+|+||||++|+.++.+.++ .++++++++|+++..... .......+...... .....+| ....
T Consensus 135 ~~~~~~~~~G~S~GG~~a~~~a~~~p~------~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~~~ 207 (275)
T TIGR02821 135 LDGERQGITGHSMGGHGALVIALKNPD------RFKSVSAFAPIVAPSRCPWGQKAFSAYLGADEA-AWRSYDASLLVAD 207 (275)
T ss_pred CCCCceEEEEEChhHHHHHHHHHhCcc------cceEEEEECCccCcccCcchHHHHHHHhccccc-chhhcchHHHHhh
Confidence 788899999999999999999998754 789999999998764321 12222223222111 1122233 2122
Q ss_pred hcccCCCCEEEEEcCCccchhh---HHHHHHHHHhcCCCccEEEEEecCCCccccccCCCchHHHHHHHHHHHHHHh
Q 039671 121 LARLGCERVLIFVAEKDFLKPV---AMNYYEDLKKSGWKGTVELVETHGEGHSFYFDNLKCEKAVELINKFVSFITQ 194 (195)
Q Consensus 121 ~~~~~~pp~~i~~g~~D~l~~~---~~~~~~~l~~~~~g~~~~~~~~~g~~H~f~~~~~~~~~~~~~~~~~~~fl~~ 194 (195)
.. ..||+++.+|+.|++++. +..+.++|+++ |+++++.++||++|+|..+ ...+.+.++|..+
T Consensus 208 ~~--~~~plli~~G~~D~~v~~~~~~~~~~~~l~~~--g~~v~~~~~~g~~H~f~~~-------~~~~~~~~~~~~~ 273 (275)
T TIGR02821 208 GG--RHSTILIDQGTADQFLDEQLRPDAFEQACRAA--GQALTLRRQAGYDHSYYFI-------ASFIADHLRHHAE 273 (275)
T ss_pred cc--cCCCeeEeecCCCcccCccccHHHHHHHHHHc--CCCeEEEEeCCCCccchhH-------HHhHHHHHHHHHh
Confidence 22 246899999999998764 57899999999 8999999999999999766 4556666666644
No 12
>PF01738 DLH: Dienelactone hydrolase family; InterPro: IPR002925 Dienelactone hydrolases play a crucial role in chlorocatechol degradation via the modified ortho cleavage pathway. Enzymes induced in 4-fluorobenzoate-utilizing bacteria have been classified into three groups on the basis of their specificity towards cis- and trans-dienelactone []. Some proteins contain repeated small fragments of this domain (for example rat kan-1 protein).; GO: 0016787 hydrolase activity; PDB: 1GGV_A 1ZIY_A 1ZI6_A 1ZIC_A 1ZJ5_A 1ZI8_A 1ZJ4_A 1ZI9_A 1ZIX_A 3F67_A.
Probab=99.67 E-value=4.9e-16 Score=116.01 Aligned_cols=136 Identities=23% Similarity=0.242 Sum_probs=98.4
Q ss_pred chHHHHHHHHHHHHHhccCCCCCCCCCCCCCCCceEEeeccchHHHHHHHHHHhccCCCCCCceeEEEeeccccCCCCcc
Q 039671 15 ACYEDSWAALNWVASHAGGNGPEPWLNDHADFGRVFIGGGSAGGNIAHTLAFQVGSIGLPRVKLVGVIMVHPFFGGTSPE 94 (195)
Q Consensus 15 ~~~~D~~~a~~~l~~~~~~~~~~~~~~~~~d~~~i~l~G~S~Gg~la~~~a~~~~~~~~~~~~~~~~i~~~p~~~~~~~~ 94 (195)
...+|+.++++||+++.. .+.+||+++|+|+||.+|+.++.... .+++++.++|......
T Consensus 77 ~~~~~~~aa~~~l~~~~~-----------~~~~kig~vGfc~GG~~a~~~a~~~~-------~~~a~v~~yg~~~~~~-- 136 (218)
T PF01738_consen 77 QVAADLQAAVDYLRAQPE-----------VDPGKIGVVGFCWGGKLALLLAARDP-------RVDAAVSFYGGSPPPP-- 136 (218)
T ss_dssp HHHHHHHHHHHHHHCTTT-----------CEEEEEEEEEETHHHHHHHHHHCCTT-------TSSEEEEES-SSSGGG--
T ss_pred HHHHHHHHHHHHHHhccc-----------cCCCcEEEEEEecchHHhhhhhhhcc-------ccceEEEEcCCCCCCc--
Confidence 346788899999998854 67899999999999999998887642 7899999999111100
Q ss_pred HHHHHHhhCCCCCCCCCCCCCCChhhhcccCCCCEEEEEcCCccchhh--HHHHHHHHHhcCCCccEEEEEecCCCcccc
Q 039671 95 EDEMWLYMCPTNGGLQDPRLKPPAEDLARLGCERVLIFVAEKDFLKPV--AMNYYEDLKKSGWKGTVELVETHGEGHSFY 172 (195)
Q Consensus 95 ~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~pp~~i~~g~~D~l~~~--~~~~~~~l~~~~~g~~~~~~~~~g~~H~f~ 172 (195)
......... .|+++++|+.|+.++. ...+.+.|+++ +.++++++|+|+.|+|.
T Consensus 137 ----------------------~~~~~~~~~-~P~l~~~g~~D~~~~~~~~~~~~~~l~~~--~~~~~~~~y~ga~HgF~ 191 (218)
T PF01738_consen 137 ----------------------PLEDAPKIK-APVLILFGENDPFFPPEEVEALEEALKAA--GVDVEVHVYPGAGHGFA 191 (218)
T ss_dssp ----------------------HHHHGGG---S-EEEEEETT-TTS-HHHHHHHHHHHHCT--TTTEEEEEETT--TTTT
T ss_pred ----------------------chhhhcccC-CCEeecCccCCCCCChHHHHHHHHHHHhc--CCcEEEEECCCCccccc
Confidence 001122222 3799999999988743 67888999999 79999999999999997
Q ss_pred ccCCC---chHHHHHHHHHHHHHHhC
Q 039671 173 FDNLK---CEKAVELINKFVSFITQL 195 (195)
Q Consensus 173 ~~~~~---~~~~~~~~~~~~~fl~~~ 195 (195)
.-... ...+++..+++++||+++
T Consensus 192 ~~~~~~~~~~aa~~a~~~~~~ff~~~ 217 (218)
T PF01738_consen 192 NPSRPPYDPAAAEDAWQRTLAFFKRH 217 (218)
T ss_dssp STTSTT--HHHHHHHHHHHHHHHCC-
T ss_pred CCCCcccCHHHHHHHHHHHHHHHHhc
Confidence 66432 346788889999999875
No 13
>PRK11460 putative hydrolase; Provisional
Probab=99.62 E-value=1.8e-14 Score=108.59 Aligned_cols=93 Identities=17% Similarity=0.080 Sum_probs=72.3
Q ss_pred CCCCceEEeeccchHHHHHHHHHHhccCCCCCCceeEEEeeccccCCCCccHHHHHHhhCCCCCCCCCCCCCCChhhhcc
Q 039671 44 ADFGRVFIGGGSAGGNIAHTLAFQVGSIGLPRVKLVGVIMVHPFFGGTSPEEDEMWLYMCPTNGGLQDPRLKPPAEDLAR 123 (195)
Q Consensus 44 ~d~~~i~l~G~S~Gg~la~~~a~~~~~~~~~~~~~~~~i~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~ 123 (195)
++.++|+|+|+|+||.+|+.++.+.+. .+.++++++|.+... +. . ....
T Consensus 100 ~~~~~i~l~GfS~Gg~~al~~a~~~~~------~~~~vv~~sg~~~~~------------~~---------~----~~~~ 148 (232)
T PRK11460 100 VGASATALIGFSQGAIMALEAVKAEPG------LAGRVIAFSGRYASL------------PE---------T----APTA 148 (232)
T ss_pred CChhhEEEEEECHHHHHHHHHHHhCCC------cceEEEEeccccccc------------cc---------c----ccCC
Confidence 788999999999999999988876532 566778887754210 00 0 0011
Q ss_pred cCCCCEEEEEcCCccchh--hHHHHHHHHHhcCCCccEEEEEecCCCcccc
Q 039671 124 LGCERVLIFVAEKDFLKP--VAMNYYEDLKKSGWKGTVELVETHGEGHSFY 172 (195)
Q Consensus 124 ~~~pp~~i~~g~~D~l~~--~~~~~~~~l~~~~~g~~~~~~~~~g~~H~f~ 172 (195)
+|++++||++|.+++ .+.++.+.|++. |.+++++++++++|.+.
T Consensus 149 ---~pvli~hG~~D~vvp~~~~~~~~~~L~~~--g~~~~~~~~~~~gH~i~ 194 (232)
T PRK11460 149 ---TTIHLIHGGEDPVIDVAHAVAAQEALISL--GGDVTLDIVEDLGHAID 194 (232)
T ss_pred ---CcEEEEecCCCCccCHHHHHHHHHHHHHC--CCCeEEEEECCCCCCCC
Confidence 379999999999885 588999999999 78999999999999773
No 14
>KOG1455 consensus Lysophospholipase [Lipid transport and metabolism]
Probab=99.62 E-value=2.8e-15 Score=113.46 Aligned_cols=161 Identities=17% Similarity=0.171 Sum_probs=110.2
Q ss_pred CCCchHHHHHHHHHHHHHhccCCCCCCCCCCCCCCCceEEeeccchHHHHHHHHHHhccCCCCCCceeEEEeeccccCCC
Q 039671 12 PIPACYEDSWAALNWVASHAGGNGPEPWLNDHADFGRVFIGGGSAGGNIAHTLAFQVGSIGLPRVKLVGVIMVHPFFGGT 91 (195)
Q Consensus 12 ~~p~~~~D~~~a~~~l~~~~~~~~~~~~~~~~~d~~~i~l~G~S~Gg~la~~~a~~~~~~~~~~~~~~~~i~~~p~~~~~ 91 (195)
.+...++|+...++.++.+.+ ...-..|++||||||.+|+.++.+.+. ...|+|+++|++...
T Consensus 105 ~~d~~v~D~~~~~~~i~~~~e-----------~~~lp~FL~GeSMGGAV~Ll~~~k~p~------~w~G~ilvaPmc~i~ 167 (313)
T KOG1455|consen 105 SFDLVVDDVISFFDSIKEREE-----------NKGLPRFLFGESMGGAVALLIALKDPN------FWDGAILVAPMCKIS 167 (313)
T ss_pred cHHHHHHHHHHHHHHHhhccc-----------cCCCCeeeeecCcchHHHHHHHhhCCc------ccccceeeecccccC
Confidence 356678889888888777654 233579999999999999999998543 789999999999876
Q ss_pred Ccc--------HHHHHHhhCCCCCCCCC--------------------CCCCC---Ch--------------hhhcccCC
Q 039671 92 SPE--------EDEMWLYMCPTNGGLQD--------------------PRLKP---PA--------------EDLARLGC 126 (195)
Q Consensus 92 ~~~--------~~~~~~~~~~~~~~~~~--------------------~~~~p---~~--------------~~~~~~~~ 126 (195)
+.. .......+.|....... +.+.. +. +.+.....
T Consensus 168 ~~~kp~p~v~~~l~~l~~liP~wk~vp~~d~~~~~~kdp~~r~~~~~npl~y~g~pRl~T~~ElLr~~~~le~~l~~vtv 247 (313)
T KOG1455|consen 168 EDTKPHPPVISILTLLSKLIPTWKIVPTKDIIDVAFKDPEKRKILRSDPLCYTGKPRLKTAYELLRVTADLEKNLNEVTV 247 (313)
T ss_pred CccCCCcHHHHHHHHHHHhCCceeecCCccccccccCCHHHHHHhhcCCceecCCccHHHHHHHHHHHHHHHHhcccccc
Confidence 654 11222333333221111 11111 00 11112233
Q ss_pred CCEEEEEcCCccchhh--HHHHHHHHHhcCCCccEEEEEecCCCccccccCCCchHHHHHHHHHHHHHHhC
Q 039671 127 ERVLIFVAEKDFLKPV--AMNYYEDLKKSGWKGTVELVETHGEGHSFYFDNLKCEKAVELINKFVSFITQL 195 (195)
Q Consensus 127 pp~~i~~g~~D~l~~~--~~~~~~~l~~~~~g~~~~~~~~~g~~H~f~~~~~~~~~~~~~~~~~~~fl~~~ 195 (195)
|.+|+||+.|.+.+. ++.|++..... ..++++|||+-|+....... +..+.++.+|++||.+.
T Consensus 248 -PflilHG~dD~VTDp~~Sk~Lye~A~S~----DKTlKlYpGm~H~Ll~gE~~-en~e~Vf~DI~~Wl~~r 312 (313)
T KOG1455|consen 248 -PFLILHGTDDKVTDPKVSKELYEKASSS----DKTLKLYPGMWHSLLSGEPD-ENVEIVFGDIISWLDER 312 (313)
T ss_pred -cEEEEecCCCcccCcHHHHHHHHhccCC----CCceeccccHHHHhhcCCCc-hhHHHHHHHHHHHHHhc
Confidence 699999999998854 77777776555 67999999999977664444 67788999999999863
No 15
>PLN02442 S-formylglutathione hydrolase
Probab=99.61 E-value=3.2e-14 Score=110.24 Aligned_cols=133 Identities=20% Similarity=0.196 Sum_probs=90.0
Q ss_pred CCCCceEEeeccchHHHHHHHHHHhccCCCCCCceeEEEeeccccCCCCc-cHHHHHHhhCCCCCCCCCCCCCC--Chhh
Q 039671 44 ADFGRVFIGGGSAGGNIAHTLAFQVGSIGLPRVKLVGVIMVHPFFGGTSP-EEDEMWLYMCPTNGGLQDPRLKP--PAED 120 (195)
Q Consensus 44 ~d~~~i~l~G~S~Gg~la~~~a~~~~~~~~~~~~~~~~i~~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~p--~~~~ 120 (195)
+|.++++|+|+|+||++|+.++.+.++ .++++++++|+++.... ........+..... .......| ....
T Consensus 140 ~~~~~~~i~G~S~GG~~a~~~a~~~p~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~-~~~~~~d~~~~~~~ 212 (283)
T PLN02442 140 LDTSRASIFGHSMGGHGALTIYLKNPD------KYKSVSAFAPIANPINCPWGQKAFTNYLGSDK-ADWEEYDATELVSK 212 (283)
T ss_pred cCCCceEEEEEChhHHHHHHHHHhCch------hEEEEEEECCccCcccCchhhHHHHHHcCCCh-hhHHHcChhhhhhh
Confidence 578899999999999999999998754 79999999999875422 11111222222211 11111222 1111
Q ss_pred hcccCCCCEEEEEcCCccchhh---HHHHHHHHHhcCCCccEEEEEecCCCccccccCCCchHHHHHHHHHHHHHH
Q 039671 121 LARLGCERVLIFVAEKDFLKPV---AMNYYEDLKKSGWKGTVELVETHGEGHSFYFDNLKCEKAVELINKFVSFIT 193 (195)
Q Consensus 121 ~~~~~~pp~~i~~g~~D~l~~~---~~~~~~~l~~~~~g~~~~~~~~~g~~H~f~~~~~~~~~~~~~~~~~~~fl~ 193 (195)
.... .+|+++++|+.|.+++. +..|.+.+++. |.+++++++||++|.|..+ ..++++.+.|..
T Consensus 213 ~~~~-~~pvli~~G~~D~~v~~~~~s~~~~~~l~~~--g~~~~~~~~pg~~H~~~~~-------~~~i~~~~~~~~ 278 (283)
T PLN02442 213 FNDV-SATILIDQGEADKFLKEQLLPENFEEACKEA--GAPVTLRLQPGYDHSYFFI-------ATFIDDHINHHA 278 (283)
T ss_pred cccc-CCCEEEEECCCCccccccccHHHHHHHHHHc--CCCeEEEEeCCCCccHHHH-------HHHHHHHHHHHH
Confidence 2111 24799999999988763 78999999999 7899999999999987533 455555555543
No 16
>COG0400 Predicted esterase [General function prediction only]
Probab=99.60 E-value=1.4e-14 Score=106.41 Aligned_cols=127 Identities=23% Similarity=0.253 Sum_probs=99.8
Q ss_pred hHHHHHHHHHHHHHhccCCCCCCCCCCCCCCCceEEeeccchHHHHHHHHHHhccCCCCCCceeEEEeeccccCCCCccH
Q 039671 16 CYEDSWAALNWVASHAGGNGPEPWLNDHADFGRVFIGGGSAGGNIAHTLAFQVGSIGLPRVKLVGVIMVHPFFGGTSPEE 95 (195)
Q Consensus 16 ~~~D~~~a~~~l~~~~~~~~~~~~~~~~~d~~~i~l~G~S~Gg~la~~~a~~~~~~~~~~~~~~~~i~~~p~~~~~~~~~ 95 (195)
...+.....+++.....+++ ++.+|++++|+|-||++++++..+.+. .++++++++|.+-....
T Consensus 76 l~~~~~~~~~~l~~~~~~~g--------i~~~~ii~~GfSqGA~ial~~~l~~~~------~~~~ail~~g~~~~~~~-- 139 (207)
T COG0400 76 LDLETEKLAEFLEELAEEYG--------IDSSRIILIGFSQGANIALSLGLTLPG------LFAGAILFSGMLPLEPE-- 139 (207)
T ss_pred HHHHHHHHHHHHHHHHHHhC--------CChhheEEEecChHHHHHHHHHHhCch------hhccchhcCCcCCCCCc--
Confidence 44555666677777777777 999999999999999999999999865 78999999998766221
Q ss_pred HHHHHhhCCCCCCCCCCCCCCChhhhcccCCCCEEEEEcCCccchh--hHHHHHHHHHhcCCCccEEEEEecCCCccccc
Q 039671 96 DEMWLYMCPTNGGLQDPRLKPPAEDLARLGCERVLIFVAEKDFLKP--VAMNYYEDLKKSGWKGTVELVETHGEGHSFYF 173 (195)
Q Consensus 96 ~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~pp~~i~~g~~D~l~~--~~~~~~~~l~~~~~g~~~~~~~~~g~~H~f~~ 173 (195)
...+.+. .|++++||++|++++ .+.++.+.|++. |.+++.+.++ ++|..
T Consensus 140 ---------------------~~~~~~~---~pill~hG~~Dpvvp~~~~~~l~~~l~~~--g~~v~~~~~~-~GH~i-- 190 (207)
T COG0400 140 ---------------------LLPDLAG---TPILLSHGTEDPVVPLALAEALAEYLTAS--GADVEVRWHE-GGHEI-- 190 (207)
T ss_pred ---------------------cccccCC---CeEEEeccCcCCccCHHHHHHHHHHHHHc--CCCEEEEEec-CCCcC--
Confidence 0012222 389999999999884 589999999999 8999999999 58944
Q ss_pred cCCCchHHHHHHHHHHHHHHh
Q 039671 174 DNLKCEKAVELINKFVSFITQ 194 (195)
Q Consensus 174 ~~~~~~~~~~~~~~~~~fl~~ 194 (195)
..+.++.+.+|+.+
T Consensus 191 -------~~e~~~~~~~wl~~ 204 (207)
T COG0400 191 -------PPEELEAARSWLAN 204 (207)
T ss_pred -------CHHHHHHHHHHHHh
Confidence 24667777778764
No 17
>COG0412 Dienelactone hydrolase and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.57 E-value=1.1e-13 Score=104.29 Aligned_cols=136 Identities=21% Similarity=0.234 Sum_probs=108.6
Q ss_pred CchHHHHHHHHHHHHHhccCCCCCCCCCCCCCCCceEEeeccchHHHHHHHHHHhccCCCCCCceeEEEeeccccCCCCc
Q 039671 14 PACYEDSWAALNWVASHAGGNGPEPWLNDHADFGRVFIGGGSAGGNIAHTLAFQVGSIGLPRVKLVGVIMVHPFFGGTSP 93 (195)
Q Consensus 14 p~~~~D~~~a~~~l~~~~~~~~~~~~~~~~~d~~~i~l~G~S~Gg~la~~~a~~~~~~~~~~~~~~~~i~~~p~~~~~~~ 93 (195)
...+.|+.++++||.++.. .+..+|+++|+|+||.+|+.++.+.+ .+++.++++|.......
T Consensus 90 ~~~~~d~~a~~~~L~~~~~-----------~~~~~ig~~GfC~GG~~a~~~a~~~~-------~v~a~v~fyg~~~~~~~ 151 (236)
T COG0412 90 AEVLADIDAALDYLARQPQ-----------VDPKRIGVVGFCMGGGLALLAATRAP-------EVKAAVAFYGGLIADDT 151 (236)
T ss_pred HHHHHHHHHHHHHHHhCCC-----------CCCceEEEEEEcccHHHHHHhhcccC-------CccEEEEecCCCCCCcc
Confidence 5788999999999998864 68899999999999999999888853 68999999998665221
Q ss_pred cHHHHHHhhCCCCCCCCCCCCCCChhhhcccCCCCEEEEEcCCccchh--hHHHHHHHHHhcCCCccEEEEEecCCCccc
Q 039671 94 EEDEMWLYMCPTNGGLQDPRLKPPAEDLARLGCERVLIFVAEKDFLKP--VAMNYYEDLKKSGWKGTVELVETHGEGHSF 171 (195)
Q Consensus 94 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~pp~~i~~g~~D~l~~--~~~~~~~~l~~~~~g~~~~~~~~~g~~H~f 171 (195)
. ....++ .|+++.+|+.|..++ ....+.+.+.++ ++.+++++|+++.|+|
T Consensus 152 ------------~----------~~~~~~----~pvl~~~~~~D~~~p~~~~~~~~~~~~~~--~~~~~~~~y~ga~H~F 203 (236)
T COG0412 152 ------------A----------DAPKIK----VPVLLHLAGEDPYIPAADVDALAAALEDA--GVKVDLEIYPGAGHGF 203 (236)
T ss_pred ------------c----------cccccc----CcEEEEecccCCCCChhHHHHHHHHHHhc--CCCeeEEEeCCCcccc
Confidence 0 011222 279999999998774 478888899999 7899999999999999
Q ss_pred cccC------CCchHHHHHHHHHHHHHHhC
Q 039671 172 YFDN------LKCEKAVELINKFVSFITQL 195 (195)
Q Consensus 172 ~~~~------~~~~~~~~~~~~~~~fl~~~ 195 (195)
.... .....++...+++++|++++
T Consensus 204 ~~~~~~~~~~y~~~aa~~a~~~~~~ff~~~ 233 (236)
T COG0412 204 ANDRADYHPGYDAAAAEDAWQRVLAFFKRL 233 (236)
T ss_pred ccCCCcccccCCHHHHHHHHHHHHHHHHHh
Confidence 8542 23346788889999999863
No 18
>PRK10566 esterase; Provisional
Probab=99.56 E-value=2e-13 Score=103.64 Aligned_cols=143 Identities=15% Similarity=0.119 Sum_probs=90.9
Q ss_pred hHHHHHHHHHHHHHhccCCCCCCCCCCCCCCCceEEeeccchHHHHHHHHHHhccCCCCCCceeEEEeecc--ccCCCCc
Q 039671 16 CYEDSWAALNWVASHAGGNGPEPWLNDHADFGRVFIGGGSAGGNIAHTLAFQVGSIGLPRVKLVGVIMVHP--FFGGTSP 93 (195)
Q Consensus 16 ~~~D~~~a~~~l~~~~~~~~~~~~~~~~~d~~~i~l~G~S~Gg~la~~~a~~~~~~~~~~~~~~~~i~~~p--~~~~~~~ 93 (195)
.++|+.++++|+.+... +|.++|+|+|+|+||.+|+.++.+.+ .+++.+.+.+ ++..
T Consensus 87 ~~~~~~~~~~~l~~~~~-----------~~~~~i~v~G~S~Gg~~al~~~~~~~-------~~~~~~~~~~~~~~~~--- 145 (249)
T PRK10566 87 NMQEFPTLRAAIREEGW-----------LLDDRLAVGGASMGGMTALGIMARHP-------WVKCVASLMGSGYFTS--- 145 (249)
T ss_pred HHHHHHHHHHHHHhcCC-----------cCccceeEEeecccHHHHHHHHHhCC-------CeeEEEEeeCcHHHHH---
Confidence 46788888888877532 68899999999999999998887753 4555444332 2210
Q ss_pred cHHHHHHhhCCCCCC-C------------CCCCCCCChhhhcccCCCCEEEEEcCCccchh--hHHHHHHHHHhcCCCc-
Q 039671 94 EEDEMWLYMCPTNGG-L------------QDPRLKPPAEDLARLGCERVLIFVAEKDFLKP--VAMNYYEDLKKSGWKG- 157 (195)
Q Consensus 94 ~~~~~~~~~~~~~~~-~------------~~~~~~p~~~~~~~~~~pp~~i~~g~~D~l~~--~~~~~~~~l~~~~~g~- 157 (195)
......+.... . .....++ ...+..+...|++++||++|.+++ ++..+.+.++++ |.
T Consensus 146 ----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~i~~~P~Lii~G~~D~~v~~~~~~~l~~~l~~~--g~~ 218 (249)
T PRK10566 146 ----LARTLFPPLIPETAAQQAEFNNIVAPLAEWEV-THQLEQLADRPLLLWHGLADDVVPAAESLRLQQALRER--GLD 218 (249)
T ss_pred ----HHHHhcccccccccccHHHHHHHHHHHhhcCh-hhhhhhcCCCCEEEEEcCCCCcCCHHHHHHHHHHHHhc--CCC
Confidence 00000000000 0 0000111 011111111379999999998874 688999999998 54
Q ss_pred -cEEEEEecCCCccccccCCCchHHHHHHHHHHHHHHhC
Q 039671 158 -TVELVETHGEGHSFYFDNLKCEKAVELINKFVSFITQL 195 (195)
Q Consensus 158 -~~~~~~~~g~~H~f~~~~~~~~~~~~~~~~~~~fl~~~ 195 (195)
+++++.++|.+|.+. ...++.+++||+++
T Consensus 219 ~~~~~~~~~~~~H~~~---------~~~~~~~~~fl~~~ 248 (249)
T PRK10566 219 KNLTCLWEPGVRHRIT---------PEALDAGVAFFRQH 248 (249)
T ss_pred cceEEEecCCCCCccC---------HHHHHHHHHHHHhh
Confidence 588999999999652 24678899999864
No 19
>PLN02298 hydrolase, alpha/beta fold family protein
Probab=99.55 E-value=2.7e-13 Score=107.22 Aligned_cols=160 Identities=19% Similarity=0.257 Sum_probs=99.6
Q ss_pred CCCchHHHHHHHHHHHHHhccCCCCCCCCCCCCCCCceEEeeccchHHHHHHHHHHhccCCCCCCceeEEEeeccccCCC
Q 039671 12 PIPACYEDSWAALNWVASHAGGNGPEPWLNDHADFGRVFIGGGSAGGNIAHTLAFQVGSIGLPRVKLVGVIMVHPFFGGT 91 (195)
Q Consensus 12 ~~p~~~~D~~~a~~~l~~~~~~~~~~~~~~~~~d~~~i~l~G~S~Gg~la~~~a~~~~~~~~~~~~~~~~i~~~p~~~~~ 91 (195)
.+....+|+.++++++..... .+..+++|+|||+||.+|+.++.+.+. +++++|+++|+....
T Consensus 110 ~~~~~~~D~~~~i~~l~~~~~-----------~~~~~i~l~GhSmGG~ia~~~a~~~p~------~v~~lvl~~~~~~~~ 172 (330)
T PLN02298 110 NVDLVVEDCLSFFNSVKQREE-----------FQGLPRFLYGESMGGAICLLIHLANPE------GFDGAVLVAPMCKIS 172 (330)
T ss_pred CHHHHHHHHHHHHHHHHhccc-----------CCCCCEEEEEecchhHHHHHHHhcCcc------cceeEEEecccccCC
Confidence 345578899999999976532 234579999999999999988877643 799999999987654
Q ss_pred Ccc-----HH---HHHHhhCCCCCC---C---C--------------CC-CC--CCC--------------hhhhcccCC
Q 039671 92 SPE-----ED---EMWLYMCPTNGG---L---Q--------------DP-RL--KPP--------------AEDLARLGC 126 (195)
Q Consensus 92 ~~~-----~~---~~~~~~~~~~~~---~---~--------------~~-~~--~p~--------------~~~~~~~~~ 126 (195)
... .. .....+.+.... . . ++ .. .+. ...+..+++
T Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~ 252 (330)
T PLN02298 173 DKIRPPWPIPQILTFVARFLPTLAIVPTADLLEKSVKVPAKKIIAKRNPMRYNGKPRLGTVVELLRVTDYLGKKLKDVSI 252 (330)
T ss_pred cccCCchHHHHHHHHHHHHCCCCccccCCCcccccccCHHHHHHHHhCccccCCCccHHHHHHHHHHHHHHHHhhhhcCC
Confidence 321 00 111112111000 0 0 00 00 000 011223343
Q ss_pred CCEEEEEcCCccchh--hHHHHHHHHHhcCCCccEEEEEecCCCccccccCCCchHHHHHHHHHHHHHHh
Q 039671 127 ERVLIFVAEKDFLKP--VAMNYYEDLKKSGWKGTVELVETHGEGHSFYFDNLKCEKAVELINKFVSFITQ 194 (195)
Q Consensus 127 pp~~i~~g~~D~l~~--~~~~~~~~l~~~~~g~~~~~~~~~g~~H~f~~~~~~~~~~~~~~~~~~~fl~~ 194 (195)
|++|++|+.|.+++ .++.+++.+... ..+++++++++|......+. ...+++.+.+.+||.+
T Consensus 253 -PvLii~G~~D~ivp~~~~~~l~~~i~~~----~~~l~~~~~a~H~~~~e~pd-~~~~~~~~~i~~fl~~ 316 (330)
T PLN02298 253 -PFIVLHGSADVVTDPDVSRALYEEAKSE----DKTIKIYDGMMHSLLFGEPD-ENIEIVRRDILSWLNE 316 (330)
T ss_pred -CEEEEecCCCCCCCHHHHHHHHHHhccC----CceEEEcCCcEeeeecCCCH-HHHHHHHHHHHHHHHH
Confidence 69999999999885 366666655432 46899999999955443322 2346778889999975
No 20
>PRK10115 protease 2; Provisional
Probab=99.53 E-value=7e-14 Score=119.92 Aligned_cols=135 Identities=16% Similarity=0.129 Sum_probs=99.3
Q ss_pred chHHHHHHHHHHHHHhccCCCCCCCCCCCCCCCceEEeeccchHHHHHHHHHHhccCCCCCCceeEEEeeccccCCCCcc
Q 039671 15 ACYEDSWAALNWVASHAGGNGPEPWLNDHADFGRVFIGGGSAGGNIAHTLAFQVGSIGLPRVKLVGVIMVHPFFGGTSPE 94 (195)
Q Consensus 15 ~~~~D~~~a~~~l~~~~~~~~~~~~~~~~~d~~~i~l~G~S~Gg~la~~~a~~~~~~~~~~~~~~~~i~~~p~~~~~~~~ 94 (195)
..++|+.++++||.++.- +|++|++++|.|+||.|+..++.+.++ .++|+|+..|++|+...+
T Consensus 503 ~~~~D~~a~~~~Lv~~g~-----------~d~~rl~i~G~S~GG~l~~~~~~~~Pd------lf~A~v~~vp~~D~~~~~ 565 (686)
T PRK10115 503 NTFNDYLDACDALLKLGY-----------GSPSLCYGMGGSAGGMLMGVAINQRPE------LFHGVIAQVPFVDVVTTM 565 (686)
T ss_pred CcHHHHHHHHHHHHHcCC-----------CChHHeEEEEECHHHHHHHHHHhcChh------heeEEEecCCchhHhhhc
Confidence 678999999999998743 899999999999999999988887654 899999999999975321
Q ss_pred ------HHH-HHHhhCCCCCCC---C-CCCCCCChhhhcccCCCCEEEEEcCCccch--hhHHHHHHHHHhcCCCccEEE
Q 039671 95 ------EDE-MWLYMCPTNGGL---Q-DPRLKPPAEDLARLGCERVLIFVAEKDFLK--PVAMNYYEDLKKSGWKGTVEL 161 (195)
Q Consensus 95 ------~~~-~~~~~~~~~~~~---~-~~~~~p~~~~~~~~~~pp~~i~~g~~D~l~--~~~~~~~~~l~~~~~g~~~~~ 161 (195)
... .+..+ +..... . ....||. ..+.....|++||++|.+|..| .++.+|+++|++. +.++++
T Consensus 566 ~~~~~p~~~~~~~e~-G~p~~~~~~~~l~~~SP~-~~v~~~~~P~lLi~~g~~D~RV~~~~~~k~~a~Lr~~--~~~~~~ 641 (686)
T PRK10115 566 LDESIPLTTGEFEEW-GNPQDPQYYEYMKSYSPY-DNVTAQAYPHLLVTTGLHDSQVQYWEPAKWVAKLREL--KTDDHL 641 (686)
T ss_pred ccCCCCCChhHHHHh-CCCCCHHHHHHHHHcCch-hccCccCCCceeEEecCCCCCcCchHHHHHHHHHHhc--CCCCce
Confidence 111 11222 221111 0 1236771 1122234677889999999877 4699999999999 788777
Q ss_pred EEe---cCCCcc
Q 039671 162 VET---HGEGHS 170 (195)
Q Consensus 162 ~~~---~g~~H~ 170 (195)
.++ ++++|+
T Consensus 642 vl~~~~~~~GHg 653 (686)
T PRK10115 642 LLLCTDMDSGHG 653 (686)
T ss_pred EEEEecCCCCCC
Confidence 777 999997
No 21
>KOG2100 consensus Dipeptidyl aminopeptidase [Posttranslational modification, protein turnover, chaperones]
Probab=99.51 E-value=2.2e-13 Score=117.49 Aligned_cols=155 Identities=17% Similarity=0.079 Sum_probs=111.1
Q ss_pred chHHHHHHHHHHHHHhccCCCCCCCCCCCCCCCceEEeeccchHHHHHHHHHHhccCCCCCCceeEEEeeccccCCCCcc
Q 039671 15 ACYEDSWAALNWVASHAGGNGPEPWLNDHADFGRVFIGGGSAGGNIAHTLAFQVGSIGLPRVKLVGVIMVHPFFGGTSPE 94 (195)
Q Consensus 15 ~~~~D~~~a~~~l~~~~~~~~~~~~~~~~~d~~~i~l~G~S~Gg~la~~~a~~~~~~~~~~~~~~~~i~~~p~~~~~~~~ 94 (195)
..++|...+++++.++.- +|.+||+|+|+|.||++++.+....+. .-++|.++.+|+++.. ..
T Consensus 587 ~ev~D~~~~~~~~~~~~~-----------iD~~ri~i~GwSyGGy~t~~~l~~~~~-----~~fkcgvavaPVtd~~-~y 649 (755)
T KOG2100|consen 587 VEVKDQIEAVKKVLKLPF-----------IDRSRVAIWGWSYGGYLTLKLLESDPG-----DVFKCGVAVAPVTDWL-YY 649 (755)
T ss_pred cchHHHHHHHHHHHhccc-----------ccHHHeEEeccChHHHHHHHHhhhCcC-----ceEEEEEEecceeeee-ee
Confidence 467899999999998862 899999999999999999998888752 2678889999999985 21
Q ss_pred HHHHHHhhCCCCCCCC--CCCCCC--ChhhhcccCCCCEEEEEcCCccch--hhHHHHHHHHHhcCCCccEEEEEecCCC
Q 039671 95 EDEMWLYMCPTNGGLQ--DPRLKP--PAEDLARLGCERVLIFVAEKDFLK--PVAMNYYEDLKKSGWKGTVELVETHGEG 168 (195)
Q Consensus 95 ~~~~~~~~~~~~~~~~--~~~~~p--~~~~~~~~~~pp~~i~~g~~D~l~--~~~~~~~~~l~~~~~g~~~~~~~~~g~~ 168 (195)
-...-..+.+...... ....++ ....++ .|..+++||+.|..| +++..+.++|+++ |+++++.+||+..
T Consensus 650 ds~~terymg~p~~~~~~y~e~~~~~~~~~~~---~~~~LliHGt~DdnVh~q~s~~~~~aL~~~--gv~~~~~vypde~ 724 (755)
T KOG2100|consen 650 DSTYTERYMGLPSENDKGYEESSVSSPANNIK---TPKLLLIHGTEDDNVHFQQSAILIKALQNA--GVPFRLLVYPDEN 724 (755)
T ss_pred cccccHhhcCCCccccchhhhccccchhhhhc---cCCEEEEEcCCcCCcCHHHHHHHHHHHHHC--CCceEEEEeCCCC
Confidence 0000001111111111 222333 223333 355799999999877 7899999999999 8999999999999
Q ss_pred ccccccCCCchHHHHHHHHHHHHHHhC
Q 039671 169 HSFYFDNLKCEKAVELINKFVSFITQL 195 (195)
Q Consensus 169 H~f~~~~~~~~~~~~~~~~~~~fl~~~ 195 (195)
|++..- +........+..|+++|
T Consensus 725 H~is~~----~~~~~~~~~~~~~~~~~ 747 (755)
T KOG2100|consen 725 HGISYV----EVISHLYEKLDRFLRDC 747 (755)
T ss_pred cccccc----cchHHHHHHHHHHHHHH
Confidence 988543 22367777888888643
No 22
>PF08840 BAAT_C: BAAT / Acyl-CoA thioester hydrolase C terminal; InterPro: IPR014940 Acyl-CoA thioesterases are a group of enzymes that catalyse the hydrolysis of acyl-CoAs to the free fatty acid and coenzyme A (CoASH), providing the potential to regulate intracellular levels of acyl-CoAs, free fatty acids and CoASH. Bile acid-CoA:amino acid N-acetyltransferase (BAAT) is involved in bile acid metabolism and may also act as an acyl-CoA thioesterase that regulates intracellular levels of free fatty acids []. This entry represents a catalytic domain is found at the C terminus of acyl-CoA thioester hydrolases and bile acid-CoA:amino acid N-acetyltransferases. ; PDB: 3K2I_B 3HLK_B.
Probab=99.49 E-value=2.7e-13 Score=100.81 Aligned_cols=157 Identities=22% Similarity=0.252 Sum_probs=89.3
Q ss_pred HHHHHHHHHHHHHhccCCCCCCCCCCCCCCCceEEeeccchHHHHHHHHHHhccCCCCCCceeEEEeeccccCCCCcc--
Q 039671 17 YEDSWAALNWVASHAGGNGPEPWLNDHADFGRVFIGGGSAGGNIAHTLAFQVGSIGLPRVKLVGVIMVHPFFGGTSPE-- 94 (195)
Q Consensus 17 ~~D~~~a~~~l~~~~~~~~~~~~~~~~~d~~~i~l~G~S~Gg~la~~~a~~~~~~~~~~~~~~~~i~~~p~~~~~~~~-- 94 (195)
+|=...|++||+++.. ++.++|+|+|.|.||-+|+.++...+ .++++|+++|..-.....
T Consensus 3 LEyfe~Ai~~L~~~p~-----------v~~~~Igi~G~SkGaelALllAs~~~-------~i~avVa~~ps~~~~~~~~~ 64 (213)
T PF08840_consen 3 LEYFEEAIDWLKSHPE-----------VDPDKIGIIGISKGAELALLLASRFP-------QISAVVAISPSSVVFQGIGF 64 (213)
T ss_dssp CHHHHHHHHHHHCSTT-----------B--SSEEEEEETHHHHHHHHHHHHSS-------SEEEEEEES--SB--SSEEE
T ss_pred hHHHHHHHHHHHhCCC-----------CCCCCEEEEEECHHHHHHHHHHhcCC-------CccEEEEeCCceeEecchhc
Confidence 5667899999999965 88899999999999999999999975 799999998865332211
Q ss_pred -------HHHHH-H-----hhCCC-------CCCCCCCCCCC---ChhhhcccCCCCEEEEEcCCccchh---hHHHHHH
Q 039671 95 -------EDEMW-L-----YMCPT-------NGGLQDPRLKP---PAEDLARLGCERVLIFVAEKDFLKP---VAMNYYE 148 (195)
Q Consensus 95 -------~~~~~-~-----~~~~~-------~~~~~~~~~~p---~~~~~~~~~~pp~~i~~g~~D~l~~---~~~~~~~ 148 (195)
..... . ...+. ........... ..+.++. |+|++.|++|.+.+ .+....+
T Consensus 65 ~~~~~~~lp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~IpvE~i~~----piLli~g~dD~~WpS~~~a~~i~~ 140 (213)
T PF08840_consen 65 YRDSSKPLPYLPFDISKFSWNEPGLLRSRYAFELADDKAVEEARIPVEKIKG----PILLISGEDDQIWPSSEMAEQIEE 140 (213)
T ss_dssp ETTE--EE----B-GGG-EE-TTS-EE-TT-B--TTTGGGCCCB--GGG--S----EEEEEEETT-SSS-HHHHHHHHHH
T ss_pred ccCCCccCCcCCcChhhceecCCcceehhhhhhcccccccccccccHHHcCC----CEEEEEeCCCCccchHHHHHHHHH
Confidence 00000 0 00000 00000000000 2333433 69999999998774 3677778
Q ss_pred HHHhcCCCccEEEEEecCCCcccccc--CC-----------------C----chHHHHHHHHHHHHHHhC
Q 039671 149 DLKKSGWKGTVELVETHGEGHSFYFD--NL-----------------K----CEKAVELINKFVSFITQL 195 (195)
Q Consensus 149 ~l~~~~~g~~~~~~~~~g~~H~f~~~--~~-----------------~----~~~~~~~~~~~~~fl~~~ 195 (195)
+|++++-..++++..|+++||.+..- +. . ....++..+.+++||+++
T Consensus 141 rL~~~~~~~~~~~l~Y~~aGH~i~~Py~P~~~~~~~~~~~~~~~~GG~~~~~a~A~~dsW~~~l~Fl~~~ 210 (213)
T PF08840_consen 141 RLKAAGFPHNVEHLSYPGAGHLIEPPYFPHCRASYHKFIGTPLAWGGEPEAHAKAQEDSWKKILEFLRKH 210 (213)
T ss_dssp HHHCTT-----EEEEETTB-S---STT-----EEEETTTTEEEE--B-HHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHhCCCCcceEEEcCCCCceecCCCCCCcccccccccCCcccCCCChHHHHHHHHHHHHHHHHHHHHH
Confidence 89999422258889999999965311 00 0 013456677899999864
No 23
>PRK13604 luxD acyl transferase; Provisional
Probab=99.49 E-value=1.1e-13 Score=107.00 Aligned_cols=132 Identities=11% Similarity=0.117 Sum_probs=84.6
Q ss_pred CCchHHHHHHHHHHHHHhccCCCCCCCCCCCCCCCceEEeeccchHHHHHHHHHHhccCCCCCCceeEEEeeccccCCCC
Q 039671 13 IPACYEDSWAALNWVASHAGGNGPEPWLNDHADFGRVFIGGGSAGGNIAHTLAFQVGSIGLPRVKLVGVIMVHPFFGGTS 92 (195)
Q Consensus 13 ~p~~~~D~~~a~~~l~~~~~~~~~~~~~~~~~d~~~i~l~G~S~Gg~la~~~a~~~~~~~~~~~~~~~~i~~~p~~~~~~ 92 (195)
+....+|+.++++|++++ +.++|+|+|||+||.+|..+|... +++++|+.||+.++.+
T Consensus 88 ~s~g~~Dl~aaid~lk~~--------------~~~~I~LiG~SmGgava~~~A~~~--------~v~~lI~~sp~~~l~d 145 (307)
T PRK13604 88 MSIGKNSLLTVVDWLNTR--------------GINNLGLIAASLSARIAYEVINEI--------DLSFLITAVGVVNLRD 145 (307)
T ss_pred ccccHHHHHHHHHHHHhc--------------CCCceEEEEECHHHHHHHHHhcCC--------CCCEEEEcCCcccHHH
Confidence 345689999999999875 235799999999999976555432 5889999999998643
Q ss_pred ccHHHHHH------------------------hhCCCCCC-CCCCCCCCChhhhcccCCCCEEEEEcCCccchh--hHHH
Q 039671 93 PEEDEMWL------------------------YMCPTNGG-LQDPRLKPPAEDLARLGCERVLIFVAEKDFLKP--VAMN 145 (195)
Q Consensus 93 ~~~~~~~~------------------------~~~~~~~~-~~~~~~~p~~~~~~~~~~pp~~i~~g~~D~l~~--~~~~ 145 (195)
........ .++..... .-....+| .+..+.++. |++++||+.|.+++ .+.+
T Consensus 146 ~l~~~~~~~~~~~p~~~lp~~~d~~g~~l~~~~f~~~~~~~~~~~~~s~-i~~~~~l~~-PvLiIHG~~D~lVp~~~s~~ 223 (307)
T PRK13604 146 TLERALGYDYLSLPIDELPEDLDFEGHNLGSEVFVTDCFKHGWDTLDST-INKMKGLDI-PFIAFTANNDSWVKQSEVID 223 (307)
T ss_pred HHHHhhhcccccCcccccccccccccccccHHHHHHHHHhcCccccccH-HHHHhhcCC-CEEEEEcCCCCccCHHHHHH
Confidence 22111110 00000000 00011222 111222332 69999999999885 4677
Q ss_pred HHHHHHhcCCCccEEEEEecCCCcccc
Q 039671 146 YYEDLKKSGWKGTVELVETHGEGHSFY 172 (195)
Q Consensus 146 ~~~~l~~~~~g~~~~~~~~~g~~H~f~ 172 (195)
+.+.++. .+.+++.+||+.|.|.
T Consensus 224 l~e~~~s----~~kkl~~i~Ga~H~l~ 246 (307)
T PRK13604 224 LLDSIRS----EQCKLYSLIGSSHDLG 246 (307)
T ss_pred HHHHhcc----CCcEEEEeCCCccccC
Confidence 7776543 3679999999999774
No 24
>PHA02857 monoglyceride lipase; Provisional
Probab=99.48 E-value=1.6e-12 Score=100.11 Aligned_cols=153 Identities=15% Similarity=0.188 Sum_probs=93.8
Q ss_pred chHHHHHHHHHHHHHhccCCCCCCCCCCCCCCCceEEeeccchHHHHHHHHHHhccCCCCCCceeEEEeeccccCCCCcc
Q 039671 15 ACYEDSWAALNWVASHAGGNGPEPWLNDHADFGRVFIGGGSAGGNIAHTLAFQVGSIGLPRVKLVGVIMVHPFFGGTSPE 94 (195)
Q Consensus 15 ~~~~D~~~a~~~l~~~~~~~~~~~~~~~~~d~~~i~l~G~S~Gg~la~~~a~~~~~~~~~~~~~~~~i~~~p~~~~~~~~ 94 (195)
..++|+..++.++.+. ....+++|+|||+||.+|+.++.+.++ .++++|+++|........
T Consensus 78 ~~~~d~~~~l~~~~~~-------------~~~~~~~lvG~S~GG~ia~~~a~~~p~------~i~~lil~~p~~~~~~~~ 138 (276)
T PHA02857 78 VYVRDVVQHVVTIKST-------------YPGVPVFLLGHSMGATISILAAYKNPN------LFTAMILMSPLVNAEAVP 138 (276)
T ss_pred HHHHHHHHHHHHHHhh-------------CCCCCEEEEEcCchHHHHHHHHHhCcc------ccceEEEecccccccccc
Confidence 4567777777776654 234679999999999999998887643 689999999987643211
Q ss_pred -HH----HHHHhhCCCCCC------------------CCCCC-----CCC------------ChhhhcccCCCCEEEEEc
Q 039671 95 -ED----EMWLYMCPTNGG------------------LQDPR-----LKP------------PAEDLARLGCERVLIFVA 134 (195)
Q Consensus 95 -~~----~~~~~~~~~~~~------------------~~~~~-----~~p------------~~~~~~~~~~pp~~i~~g 134 (195)
.. .....+.+.... ..++. ... ..+.+..+++ |+++++|
T Consensus 139 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~-Pvliv~G 217 (276)
T PHA02857 139 RLNLLAAKLMGIFYPNKIVGKLCPESVSRDMDEVYKYQYDPLVNHEKIKAGFASQVLKATNKVRKIIPKIKT-PILILQG 217 (276)
T ss_pred HHHHHHHHHHHHhCCCCccCCCCHhhccCCHHHHHHHhcCCCccCCCccHHHHHHHHHHHHHHHHhcccCCC-CEEEEec
Confidence 00 000101110000 00000 000 0112233344 5999999
Q ss_pred CCccchh--hHHHHHHHHHhcCCCccEEEEEecCCCccccccCCCchHHHHHHHHHHHHHHh
Q 039671 135 EKDFLKP--VAMNYYEDLKKSGWKGTVELVETHGEGHSFYFDNLKCEKAVELINKFVSFITQ 194 (195)
Q Consensus 135 ~~D~l~~--~~~~~~~~l~~~~~g~~~~~~~~~g~~H~f~~~~~~~~~~~~~~~~~~~fl~~ 194 (195)
+.|.+++ .+..+.+.+ +..+++.++++++|...... .+..++..+++.+||++
T Consensus 218 ~~D~i~~~~~~~~l~~~~-----~~~~~~~~~~~~gH~~~~e~--~~~~~~~~~~~~~~l~~ 272 (276)
T PHA02857 218 TNNEISDVSGAYYFMQHA-----NCNREIKIYEGAKHHLHKET--DEVKKSVMKEIETWIFN 272 (276)
T ss_pred CCCCcCChHHHHHHHHHc-----cCCceEEEeCCCcccccCCc--hhHHHHHHHHHHHHHHH
Confidence 9999885 355554443 22569999999999665432 13467899999999975
No 25
>PLN02385 hydrolase; alpha/beta fold family protein
Probab=99.48 E-value=1e-12 Score=104.76 Aligned_cols=161 Identities=17% Similarity=0.183 Sum_probs=95.9
Q ss_pred CCCchHHHHHHHHHHHHHhccCCCCCCCCCCCCCCCceEEeeccchHHHHHHHHHHhccCCCCCCceeEEEeeccccCCC
Q 039671 12 PIPACYEDSWAALNWVASHAGGNGPEPWLNDHADFGRVFIGGGSAGGNIAHTLAFQVGSIGLPRVKLVGVIMVHPFFGGT 91 (195)
Q Consensus 12 ~~p~~~~D~~~a~~~l~~~~~~~~~~~~~~~~~d~~~i~l~G~S~Gg~la~~~a~~~~~~~~~~~~~~~~i~~~p~~~~~ 91 (195)
++....+|+.++++++..... .+..+++|+|||+||.+|+.++.+.+. +++++|+++|.....
T Consensus 138 ~~~~~~~dv~~~l~~l~~~~~-----------~~~~~~~LvGhSmGG~val~~a~~~p~------~v~glVLi~p~~~~~ 200 (349)
T PLN02385 138 SFDDLVDDVIEHYSKIKGNPE-----------FRGLPSFLFGQSMGGAVALKVHLKQPN------AWDGAILVAPMCKIA 200 (349)
T ss_pred CHHHHHHHHHHHHHHHHhccc-----------cCCCCEEEEEeccchHHHHHHHHhCcc------hhhheeEeccccccc
Confidence 344566777777777754321 345689999999999999999888754 789999999976542
Q ss_pred Ccc-----HHHH---HHhhCCCC------CCC----C----------C--CCC-CCC--------------hhhhcccCC
Q 039671 92 SPE-----EDEM---WLYMCPTN------GGL----Q----------D--PRL-KPP--------------AEDLARLGC 126 (195)
Q Consensus 92 ~~~-----~~~~---~~~~~~~~------~~~----~----------~--~~~-~p~--------------~~~~~~~~~ 126 (195)
... .... .....+.. ... . . ... .+. ...+..++.
T Consensus 201 ~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~~i~~ 280 (349)
T PLN02385 201 DDVVPPPLVLQILILLANLLPKAKLVPQKDLAELAFRDLKKRKMAEYNVIAYKDKPRLRTAVELLRTTQEIEMQLEEVSL 280 (349)
T ss_pred ccccCchHHHHHHHHHHHHCCCceecCCCccccccccCHHHHHHhhcCcceeCCCcchHHHHHHHHHHHHHHHhcccCCC
Confidence 211 0000 00000100 000 0 0 000 000 011223343
Q ss_pred CCEEEEEcCCccchhh--HHHHHHHHHhcCCCccEEEEEecCCCccccccCCCchHHHHHHHHHHHHHHhC
Q 039671 127 ERVLIFVAEKDFLKPV--AMNYYEDLKKSGWKGTVELVETHGEGHSFYFDNLKCEKAVELINKFVSFITQL 195 (195)
Q Consensus 127 pp~~i~~g~~D~l~~~--~~~~~~~l~~~~~g~~~~~~~~~g~~H~f~~~~~~~~~~~~~~~~~~~fl~~~ 195 (195)
|+++++|++|.+++. +..+.+.+... ..+++++++++|......+. ...+++++.+++||+++
T Consensus 281 -P~Lii~G~~D~vv~~~~~~~l~~~~~~~----~~~l~~i~~~gH~l~~e~p~-~~~~~v~~~i~~wL~~~ 345 (349)
T PLN02385 281 -PLLILHGEADKVTDPSVSKFLYEKASSS----DKKLKLYEDAYHSILEGEPD-EMIFQVLDDIISWLDSH 345 (349)
T ss_pred -CEEEEEeCCCCccChHHHHHHHHHcCCC----CceEEEeCCCeeecccCCCh-hhHHHHHHHHHHHHHHh
Confidence 599999999998853 55555555322 46899999999955433222 22456889999999864
No 26
>KOG1552 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=99.47 E-value=3.5e-13 Score=100.19 Aligned_cols=122 Identities=25% Similarity=0.354 Sum_probs=87.4
Q ss_pred CchHHHHHHHHHHHHHhccCCCCCCCCCCCCCCCceEEeeccchHHHHHHHHHHhccCCCCCCceeEEEeeccccCCCCc
Q 039671 14 PACYEDSWAALNWVASHAGGNGPEPWLNDHADFGRVFIGGGSAGGNIAHTLAFQVGSIGLPRVKLVGVIMVHPFFGGTSP 93 (195)
Q Consensus 14 p~~~~D~~~a~~~l~~~~~~~~~~~~~~~~~d~~~i~l~G~S~Gg~la~~~a~~~~~~~~~~~~~~~~i~~~p~~~~~~~ 93 (195)
-...+|+.++++||++.. ...++|+|+|+|+|..-++.+|.+. .++|+|+.+|+++....
T Consensus 109 ~n~y~Di~avye~Lr~~~------------g~~~~Iil~G~SiGt~~tv~Lasr~--------~~~alVL~SPf~S~~rv 168 (258)
T KOG1552|consen 109 RNLYADIKAVYEWLRNRY------------GSPERIILYGQSIGTVPTVDLASRY--------PLAAVVLHSPFTSGMRV 168 (258)
T ss_pred ccchhhHHHHHHHHHhhc------------CCCceEEEEEecCCchhhhhHhhcC--------CcceEEEeccchhhhhh
Confidence 378899999999999984 2578999999999999999999886 37999999999887433
Q ss_pred cHHHHHHhhCCCCCCCCCCCCCCChhhhcccCCCCEEEEEcCCccchhh--HHHHHHHHHhcCCCccEEEEEecCCCc
Q 039671 94 EEDEMWLYMCPTNGGLQDPRLKPPAEDLARLGCERVLIFVAEKDFLKPV--AMNYYEDLKKSGWKGTVELVETHGEGH 169 (195)
Q Consensus 94 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~pp~~i~~g~~D~l~~~--~~~~~~~l~~~~~g~~~~~~~~~g~~H 169 (195)
+ .+.......-..-+....++..++| ++++||++|.+++. +.++.++.+ .+++-.+..|++|
T Consensus 169 ~--------~~~~~~~~~~d~f~~i~kI~~i~~P-VLiiHgtdDevv~~sHg~~Lye~~k-----~~~epl~v~g~gH 232 (258)
T KOG1552|consen 169 A--------FPDTKTTYCFDAFPNIEKISKITCP-VLIIHGTDDEVVDFSHGKALYERCK-----EKVEPLWVKGAGH 232 (258)
T ss_pred h--------ccCcceEEeeccccccCcceeccCC-EEEEecccCceecccccHHHHHhcc-----ccCCCcEEecCCC
Confidence 1 1110000000011123445555555 99999999998864 677776664 4467788899999
No 27
>PRK10749 lysophospholipase L2; Provisional
Probab=99.43 E-value=7.2e-12 Score=99.18 Aligned_cols=161 Identities=16% Similarity=0.159 Sum_probs=97.8
Q ss_pred CCchHHHHHHHHHHHHHhccCCCCCCCCCCCCCCCceEEeeccchHHHHHHHHHHhccCCCCCCceeEEEeeccccCCCC
Q 039671 13 IPACYEDSWAALNWVASHAGGNGPEPWLNDHADFGRVFIGGGSAGGNIAHTLAFQVGSIGLPRVKLVGVIMVHPFFGGTS 92 (195)
Q Consensus 13 ~p~~~~D~~~a~~~l~~~~~~~~~~~~~~~~~d~~~i~l~G~S~Gg~la~~~a~~~~~~~~~~~~~~~~i~~~p~~~~~~ 92 (195)
+...++|+.++++.+.+. .+..+++++|||+||.+|+.++.+.++ .++++|+.+|......
T Consensus 110 ~~~~~~d~~~~~~~~~~~-------------~~~~~~~l~GhSmGG~ia~~~a~~~p~------~v~~lvl~~p~~~~~~ 170 (330)
T PRK10749 110 FNDYVDDLAAFWQQEIQP-------------GPYRKRYALAHSMGGAILTLFLQRHPG------VFDAIALCAPMFGIVL 170 (330)
T ss_pred HHHHHHHHHHHHHHHHhc-------------CCCCCeEEEEEcHHHHHHHHHHHhCCC------CcceEEEECchhccCC
Confidence 445566666666655443 345789999999999999988887654 7899999999764321
Q ss_pred cc----HHHH---HHhhC----------CCCCC----------------------CCCCCC---CCC-------------
Q 039671 93 PE----EDEM---WLYMC----------PTNGG----------------------LQDPRL---KPP------------- 117 (195)
Q Consensus 93 ~~----~~~~---~~~~~----------~~~~~----------------------~~~~~~---~p~------------- 117 (195)
.. .... ..... ..... ..++.. .+.
T Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (330)
T PRK10749 171 PLPSWMARRILNWAEGHPRIRDGYAIGTGRWRPLPFAINVLTHSRERYRRNLRFYADDPELRVGGPTYHWVRESILAGEQ 250 (330)
T ss_pred CCCcHHHHHHHHHHHHhcCCCCcCCCCCCCCCCCCcCCCCCCCCHHHHHHHHHHHHhCCCcccCCCcHHHHHHHHHHHHH
Confidence 11 0000 00000 00000 000000 000
Q ss_pred -hhhhcccCCCCEEEEEcCCccchh--hHHHHHHHHHhcC-CCccEEEEEecCCCccccccCCCchHHHHHHHHHHHHHH
Q 039671 118 -AEDLARLGCERVLIFVAEKDFLKP--VAMNYYEDLKKSG-WKGTVELVETHGEGHSFYFDNLKCEKAVELINKFVSFIT 193 (195)
Q Consensus 118 -~~~~~~~~~pp~~i~~g~~D~l~~--~~~~~~~~l~~~~-~g~~~~~~~~~g~~H~f~~~~~~~~~~~~~~~~~~~fl~ 193 (195)
......+. .|+++++|+.|.+++ .+..+++.+++++ +...+++++++|++|......+ ...+++++++++||+
T Consensus 251 ~~~~~~~i~-~P~Lii~G~~D~vv~~~~~~~~~~~l~~~~~~~~~~~l~~~~gagH~~~~E~~--~~r~~v~~~i~~fl~ 327 (330)
T PRK10749 251 VLAGAGDIT-TPLLLLQAEEERVVDNRMHDRFCEARTAAGHPCEGGKPLVIKGAYHEILFEKD--AMRSVALNAIVDFFN 327 (330)
T ss_pred HHhhccCCC-CCEEEEEeCCCeeeCHHHHHHHHHHHhhcCCCCCCceEEEeCCCcchhhhCCc--HHHHHHHHHHHHHHh
Confidence 01112233 369999999999885 4777888887762 0134689999999995543321 235788899999998
Q ss_pred hC
Q 039671 194 QL 195 (195)
Q Consensus 194 ~~ 195 (195)
++
T Consensus 328 ~~ 329 (330)
T PRK10749 328 RH 329 (330)
T ss_pred hc
Confidence 64
No 28
>PF12695 Abhydrolase_5: Alpha/beta hydrolase family; PDB: 3D0K_B 2I3D_B 3DOH_B 3DOI_B 3PFB_A 3S2Z_B 3PFC_A 3QM1_A 3PF8_B 3PF9_A ....
Probab=99.42 E-value=3.7e-12 Score=88.59 Aligned_cols=112 Identities=30% Similarity=0.392 Sum_probs=77.1
Q ss_pred CcCCCCCCCCCCchHHHHHHHHHHHHHhccCCCCCCCCCCCCCCCceEEeeccchHHHHHHHHHHhccCCCCCCceeEEE
Q 039671 3 VEYGLFPDRPIPACYEDSWAALNWVASHAGGNGPEPWLNDHADFGRVFIGGGSAGGNIAHTLAFQVGSIGLPRVKLVGVI 82 (195)
Q Consensus 3 ~~Yrlap~~~~p~~~~D~~~a~~~l~~~~~~~~~~~~~~~~~d~~~i~l~G~S~Gg~la~~~a~~~~~~~~~~~~~~~~i 82 (195)
++|+..... ....++.++++++.+.. .+.++|+++|+|+||.+++.++.+.. +++++|
T Consensus 32 ~~~~~~~~~---~~~~~~~~~~~~~~~~~------------~~~~~i~l~G~S~Gg~~a~~~~~~~~-------~v~~~v 89 (145)
T PF12695_consen 32 FDYPGHGDS---DGADAVERVLADIRAGY------------PDPDRIILIGHSMGGAIAANLAARNP-------RVKAVV 89 (145)
T ss_dssp ESCTTSTTS---HHSHHHHHHHHHHHHHH------------CTCCEEEEEEETHHHHHHHHHHHHST-------TESEEE
T ss_pred EecCCCCcc---chhHHHHHHHHHHHhhc------------CCCCcEEEEEEccCcHHHHHHhhhcc-------ceeEEE
Confidence 455444333 44457777777765432 47889999999999999999888752 899999
Q ss_pred eeccccCCCCccHHHHHHhhCCCCCCCCCCCCCCChhhhcccCCCCEEEEEcCCccchh--hHHHHHHHHHhcCCCccEE
Q 039671 83 MVHPFFGGTSPEEDEMWLYMCPTNGGLQDPRLKPPAEDLARLGCERVLIFVAEKDFLKP--VAMNYYEDLKKSGWKGTVE 160 (195)
Q Consensus 83 ~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~pp~~i~~g~~D~l~~--~~~~~~~~l~~~~~g~~~~ 160 (195)
+++|+.+. +.+...+ .|+++++|+.|.+++ ...++.++++ .+.+
T Consensus 90 ~~~~~~~~----------------------------~~~~~~~-~pv~~i~g~~D~~~~~~~~~~~~~~~~-----~~~~ 135 (145)
T PF12695_consen 90 LLSPYPDS----------------------------EDLAKIR-IPVLFIHGENDPLVPPEQVRRLYEALP-----GPKE 135 (145)
T ss_dssp EESESSGC----------------------------HHHTTTT-SEEEEEEETT-SSSHHHHHHHHHHHHC-----SSEE
T ss_pred EecCccch----------------------------hhhhccC-CcEEEEEECCCCcCCHHHHHHHHHHcC-----CCcE
Confidence 99994221 1222222 279999999999874 3555555553 4679
Q ss_pred EEEecCCCcc
Q 039671 161 LVETHGEGHS 170 (195)
Q Consensus 161 ~~~~~g~~H~ 170 (195)
++.++|++|.
T Consensus 136 ~~~i~g~~H~ 145 (145)
T PF12695_consen 136 LYIIPGAGHF 145 (145)
T ss_dssp EEEETTS-TT
T ss_pred EEEeCCCcCc
Confidence 9999999993
No 29
>PRK05077 frsA fermentation/respiration switch protein; Reviewed
Probab=99.33 E-value=5.7e-11 Score=96.70 Aligned_cols=147 Identities=16% Similarity=0.074 Sum_probs=88.3
Q ss_pred HHHHHHHHHHHhccCCCCCCCCCCCCCCCceEEeeccchHHHHHHHHHHhccCCCCCCceeEEEeeccccCCCCcc----
Q 039671 19 DSWAALNWVASHAGGNGPEPWLNDHADFGRVFIGGGSAGGNIAHTLAFQVGSIGLPRVKLVGVIMVHPFFGGTSPE---- 94 (195)
Q Consensus 19 D~~~a~~~l~~~~~~~~~~~~~~~~~d~~~i~l~G~S~Gg~la~~~a~~~~~~~~~~~~~~~~i~~~p~~~~~~~~---- 94 (195)
...++++|+.+... +|.+||+++|+|+||++|+.++...++ +++++|+++|+++.....
T Consensus 248 ~~~avld~l~~~~~-----------vd~~ri~l~G~S~GG~~Al~~A~~~p~------ri~a~V~~~~~~~~~~~~~~~~ 310 (414)
T PRK05077 248 LHQAVLNALPNVPW-----------VDHTRVAAFGFRFGANVAVRLAYLEPP------RLKAVACLGPVVHTLLTDPKRQ 310 (414)
T ss_pred HHHHHHHHHHhCcc-----------cCcccEEEEEEChHHHHHHHHHHhCCc------CceEEEEECCccchhhcchhhh
Confidence 33577888877643 789999999999999999998887543 799999999987521110
Q ss_pred ---HHHHHH---hhCCCCCCC------CCCCCCC-Chhhh-cccCCCCEEEEEcCCccchhhHHHHHHHHHhcCCCccEE
Q 039671 95 ---EDEMWL---YMCPTNGGL------QDPRLKP-PAEDL-ARLGCERVLIFVAEKDFLKPVAMNYYEDLKKSGWKGTVE 160 (195)
Q Consensus 95 ---~~~~~~---~~~~~~~~~------~~~~~~p-~~~~~-~~~~~pp~~i~~g~~D~l~~~~~~~~~~l~~~~~g~~~~ 160 (195)
...+.. ...+..... .....+. ....+ ..++. |+++++|++|++++.... +.+.+. ....+
T Consensus 311 ~~~p~~~~~~la~~lg~~~~~~~~l~~~l~~~sl~~~~~l~~~i~~-PvLiI~G~~D~ivP~~~a--~~l~~~--~~~~~ 385 (414)
T PRK05077 311 QQVPEMYLDVLASRLGMHDASDEALRVELNRYSLKVQGLLGRRCPT-PMLSGYWKNDPFSPEEDS--RLIASS--SADGK 385 (414)
T ss_pred hhchHHHHHHHHHHhCCCCCChHHHHHHhhhccchhhhhhccCCCC-cEEEEecCCCCCCCHHHH--HHHHHh--CCCCe
Confidence 111111 111110000 0001111 00111 12333 699999999998854322 233333 23558
Q ss_pred EEEecCCCccccccCCCchHHHHHHHHHHHHHHhC
Q 039671 161 LVETHGEGHSFYFDNLKCEKAVELINKFVSFITQL 195 (195)
Q Consensus 161 ~~~~~g~~H~f~~~~~~~~~~~~~~~~~~~fl~~~ 195 (195)
+.++|+. |.+ +...+....+.+||+++
T Consensus 386 l~~i~~~-~~~-------e~~~~~~~~i~~wL~~~ 412 (414)
T PRK05077 386 LLEIPFK-PVY-------RNFDKALQEISDWLEDR 412 (414)
T ss_pred EEEccCC-Ccc-------CCHHHHHHHHHHHHHHH
Confidence 8999996 323 24478899999999863
No 30
>PLN02652 hydrolase; alpha/beta fold family protein
Probab=99.33 E-value=5.5e-11 Score=96.16 Aligned_cols=155 Identities=16% Similarity=0.222 Sum_probs=93.9
Q ss_pred CchHHHHHHHHHHHHHhccCCCCCCCCCCCCCCCceEEeeccchHHHHHHHHHHhccCCCCCCceeEEEeeccccCCCCc
Q 039671 14 PACYEDSWAALNWVASHAGGNGPEPWLNDHADFGRVFIGGGSAGGNIAHTLAFQVGSIGLPRVKLVGVIMVHPFFGGTSP 93 (195)
Q Consensus 14 p~~~~D~~~a~~~l~~~~~~~~~~~~~~~~~d~~~i~l~G~S~Gg~la~~~a~~~~~~~~~~~~~~~~i~~~p~~~~~~~ 93 (195)
....+|+.++++++... .+..+++|+|||+||.+++.++.. ++ . ..+++++|+.+|++.....
T Consensus 188 ~~~~~Dl~~~l~~l~~~-------------~~~~~i~lvGhSmGG~ial~~a~~-p~-~--~~~v~glVL~sP~l~~~~~ 250 (395)
T PLN02652 188 DYVVEDTEAFLEKIRSE-------------NPGVPCFLFGHSTGGAVVLKAASY-PS-I--EDKLEGIVLTSPALRVKPA 250 (395)
T ss_pred HHHHHHHHHHHHHHHHh-------------CCCCCEEEEEECHHHHHHHHHHhc-cC-c--ccccceEEEECcccccccc
Confidence 34578899999988765 233479999999999999877643 21 0 1268999999998765432
Q ss_pred c-----HHHHHHhhCCCC-----CCC-----CC------CCCCC---------------------ChhhhcccCCCCEEE
Q 039671 94 E-----EDEMWLYMCPTN-----GGL-----QD------PRLKP---------------------PAEDLARLGCERVLI 131 (195)
Q Consensus 94 ~-----~~~~~~~~~~~~-----~~~-----~~------~~~~p---------------------~~~~~~~~~~pp~~i 131 (195)
. .........+.. ... .. ....| ....+..+++ |+++
T Consensus 251 ~~~~~~~~~l~~~~~p~~~~~~~~~~~~~~s~~~~~~~~~~~dp~~~~g~i~~~~~~~~~~~~~~l~~~L~~I~v-PvLI 329 (395)
T PLN02652 251 HPIVGAVAPIFSLVAPRFQFKGANKRGIPVSRDPAALLAKYSDPLVYTGPIRVRTGHEILRISSYLTRNFKSVTV-PFMV 329 (395)
T ss_pred hHHHHHHHHHHHHhCCCCcccCcccccCCcCCCHHHHHHHhcCCCcccCCchHHHHHHHHHHHHHHHhhcccCCC-CEEE
Confidence 1 001111111110 000 00 00001 0011233344 5999
Q ss_pred EEcCCccchh--hHHHHHHHHHhcCCCccEEEEEecCCCccccccCCCchHHHHHHHHHHHHHHh
Q 039671 132 FVAEKDFLKP--VAMNYYEDLKKSGWKGTVELVETHGEGHSFYFDNLKCEKAVELINKFVSFITQ 194 (195)
Q Consensus 132 ~~g~~D~l~~--~~~~~~~~l~~~~~g~~~~~~~~~g~~H~f~~~~~~~~~~~~~~~~~~~fl~~ 194 (195)
++|++|.+++ .+..+++++.. ...++++++|+.|..... +..+++.+.+.+||++
T Consensus 330 i~G~~D~vvp~~~a~~l~~~~~~----~~k~l~~~~ga~H~l~~e----~~~e~v~~~I~~FL~~ 386 (395)
T PLN02652 330 LHGTADRVTDPLASQDLYNEAAS----RHKDIKLYDGFLHDLLFE----PEREEVGRDIIDWMEK 386 (395)
T ss_pred EEeCCCCCCCHHHHHHHHHhcCC----CCceEEEECCCeEEeccC----CCHHHHHHHHHHHHHH
Confidence 9999999885 35555555433 246788899999954332 2457888999999975
No 31
>COG2267 PldB Lysophospholipase [Lipid metabolism]
Probab=99.32 E-value=7.6e-11 Score=91.94 Aligned_cols=139 Identities=17% Similarity=0.214 Sum_probs=86.3
Q ss_pred CCceEEeeccchHHHHHHHHHHhccCCCCCCceeEEEeeccccCCCC--cc---HHHH---HHhhCCC---CC-------
Q 039671 46 FGRVFIGGGSAGGNIAHTLAFQVGSIGLPRVKLVGVIMVHPFFGGTS--PE---EDEM---WLYMCPT---NG------- 107 (195)
Q Consensus 46 ~~~i~l~G~S~Gg~la~~~a~~~~~~~~~~~~~~~~i~~~p~~~~~~--~~---~~~~---~~~~~~~---~~------- 107 (195)
..+++|+||||||.+|+.++.+... .++++|+.+|.+.... .. .... .....+. ..
T Consensus 106 ~~p~~l~gHSmGg~Ia~~~~~~~~~------~i~~~vLssP~~~l~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~ 179 (298)
T COG2267 106 GLPVFLLGHSMGGLIALLYLARYPP------RIDGLVLSSPALGLGGAILRLILARLALKLLGRIRPKLPVDSNLLEGVL 179 (298)
T ss_pred CCCeEEEEeCcHHHHHHHHHHhCCc------cccEEEEECccccCChhHHHHHHHHHhcccccccccccccCcccccCcC
Confidence 4689999999999999999988763 8999999999998873 11 0000 0000000 00
Q ss_pred -------------CCCCCCCCC------------------ChhhhcccCCCCEEEEEcCCccchhhHHHHHHHHHhcCCC
Q 039671 108 -------------GLQDPRLKP------------------PAEDLARLGCERVLIFVAEKDFLKPVAMNYYEDLKKSGWK 156 (195)
Q Consensus 108 -------------~~~~~~~~p------------------~~~~~~~~~~pp~~i~~g~~D~l~~~~~~~~~~l~~~~~g 156 (195)
...++.+.. .......... |++|++|+.|.++++.....+.+++.+ .
T Consensus 180 ~~~~sr~~~~~~~~~~dP~~~~~~~~~~w~~~~~~a~~~~~~~~~~~~~~-PvLll~g~~D~vv~~~~~~~~~~~~~~-~ 257 (298)
T COG2267 180 TDDLSRDPAEVAAYEADPLIGVGGPVSRWVDLALLAGRVPALRDAPAIAL-PVLLLQGGDDRVVDNVEGLARFFERAG-S 257 (298)
T ss_pred cchhhcCHHHHHHHhcCCccccCCccHHHHHHHHHhhcccchhccccccC-CEEEEecCCCccccCcHHHHHHHHhcC-C
Confidence 001111000 0000011122 699999999998875445555666663 2
Q ss_pred ccEEEEEecCCCccccccCCCchHHHHHHHHHHHHHHh
Q 039671 157 GTVELVETHGEGHSFYFDNLKCEKAVELINKFVSFITQ 194 (195)
Q Consensus 157 ~~~~~~~~~g~~H~f~~~~~~~~~~~~~~~~~~~fl~~ 194 (195)
..+++++++|+.|...... .... +++.+.+.+|+.+
T Consensus 258 ~~~~~~~~~g~~He~~~E~-~~~r-~~~~~~~~~~l~~ 293 (298)
T COG2267 258 PDKELKVIPGAYHELLNEP-DRAR-EEVLKDILAWLAE 293 (298)
T ss_pred CCceEEecCCcchhhhcCc-chHH-HHHHHHHHHHHHh
Confidence 2479999999999655442 2122 8889999999875
No 32
>COG1647 Esterase/lipase [General function prediction only]
Probab=99.32 E-value=4.9e-12 Score=91.89 Aligned_cols=152 Identities=18% Similarity=0.269 Sum_probs=98.8
Q ss_pred CCCchHHHHHHHHHHHHHhccCCCCCCCCCCCCCCCceEEeeccchHHHHHHHHHHhccCCCCCCceeEEEeeccccCCC
Q 039671 12 PIPACYEDSWAALNWVASHAGGNGPEPWLNDHADFGRVFIGGGSAGGNIAHTLAFQVGSIGLPRVKLVGVIMVHPFFGGT 91 (195)
Q Consensus 12 ~~p~~~~D~~~a~~~l~~~~~~~~~~~~~~~~~d~~~i~l~G~S~Gg~la~~~a~~~~~~~~~~~~~~~~i~~~p~~~~~ 91 (195)
+..+.++|+.+++++|.+.. -++|.++|-||||-+|+.+|.+. .+++++.+|+.+...
T Consensus 64 ~~~DW~~~v~d~Y~~L~~~g--------------y~eI~v~GlSmGGv~alkla~~~--------p~K~iv~m~a~~~~k 121 (243)
T COG1647 64 TPRDWWEDVEDGYRDLKEAG--------------YDEIAVVGLSMGGVFALKLAYHY--------PPKKIVPMCAPVNVK 121 (243)
T ss_pred CHHHHHHHHHHHHHHHHHcC--------------CCeEEEEeecchhHHHHHHHhhC--------CccceeeecCCcccc
Confidence 34468899999999999763 25899999999999999999997 578999999887753
Q ss_pred Ccc--HHHHHHhh--CCCCCCCCC-------CCCC--C--C-----------hhhhcccCCCCEEEEEcCCccchhh--H
Q 039671 92 SPE--EDEMWLYM--CPTNGGLQD-------PRLK--P--P-----------AEDLARLGCERVLIFVAEKDFLKPV--A 143 (195)
Q Consensus 92 ~~~--~~~~~~~~--~~~~~~~~~-------~~~~--p--~-----------~~~~~~~~~pp~~i~~g~~D~l~~~--~ 143 (195)
+.. ...+..++ ......... .... | . ...+..+ .-|++++.|.+|.+++. +
T Consensus 122 ~~~~iie~~l~y~~~~kk~e~k~~e~~~~e~~~~~~~~~~~~~~~~~~i~~~~~~~~~I-~~pt~vvq~~~D~mv~~~sA 200 (243)
T COG1647 122 SWRIIIEGLLEYFRNAKKYEGKDQEQIDKEMKSYKDTPMTTTAQLKKLIKDARRSLDKI-YSPTLVVQGRQDEMVPAESA 200 (243)
T ss_pred cchhhhHHHHHHHHHhhhccCCCHHHHHHHHHHhhcchHHHHHHHHHHHHHHHhhhhhc-ccchhheecccCCCCCHHHH
Confidence 322 11111100 000000000 0001 1 0 0111112 23799999999998854 5
Q ss_pred HHHHHHHHhcCCCccEEEEEecCCCccccccCCCchHHHHHHHHHHHHHHh
Q 039671 144 MNYYEDLKKSGWKGTVELVETHGEGHSFYFDNLKCEKAVELINKFVSFITQ 194 (195)
Q Consensus 144 ~~~~~~l~~~~~g~~~~~~~~~g~~H~f~~~~~~~~~~~~~~~~~~~fl~~ 194 (195)
..+++..... +.++.++++.+|..... .+.++..+.++.||+.
T Consensus 201 ~~Iy~~v~s~----~KeL~~~e~SgHVIt~D----~Erd~v~e~V~~FL~~ 243 (243)
T COG1647 201 NFIYDHVESD----DKELKWLEGSGHVITLD----KERDQVEEDVITFLEK 243 (243)
T ss_pred HHHHHhccCC----cceeEEEccCCceeecc----hhHHHHHHHHHHHhhC
Confidence 5555555433 77999999999966443 5667888999999863
No 33
>KOG3043 consensus Predicted hydrolase related to dienelactone hydrolase [General function prediction only]
Probab=99.31 E-value=1.1e-11 Score=90.15 Aligned_cols=136 Identities=24% Similarity=0.357 Sum_probs=102.0
Q ss_pred CCCCchHHHHHHHHHHHHHhccCCCCCCCCCCCCCCCceEEeeccchHHHHHHHHHHhccCCCCCCceeEEEeeccccCC
Q 039671 11 RPIPACYEDSWAALNWVASHAGGNGPEPWLNDHADFGRVFIGGGSAGGNIAHTLAFQVGSIGLPRVKLVGVIMVHPFFGG 90 (195)
Q Consensus 11 ~~~p~~~~D~~~a~~~l~~~~~~~~~~~~~~~~~d~~~i~l~G~S~Gg~la~~~a~~~~~~~~~~~~~~~~i~~~p~~~~ 90 (195)
+..|...+|+...++||+.+ .+..+|+++|.++||..+..+..... .+.++++++|.+..
T Consensus 97 ~~~~~~~~~i~~v~k~lk~~-------------g~~kkIGv~GfCwGak~vv~~~~~~~-------~f~a~v~~hps~~d 156 (242)
T KOG3043|consen 97 HSPPKIWKDITAVVKWLKNH-------------GDSKKIGVVGFCWGAKVVVTLSAKDP-------EFDAGVSFHPSFVD 156 (242)
T ss_pred CCcccchhHHHHHHHHHHHc-------------CCcceeeEEEEeecceEEEEeeccch-------hheeeeEecCCcCC
Confidence 45677899999999999966 67899999999999988876665543 68899999998544
Q ss_pred CCccHHHHHHhhCCCCCCCCCCCCCCChhhhcccCCCCEEEEEcCCccchh--hHHHHHHHHHhcCCCccEEEEEecCCC
Q 039671 91 TSPEEDEMWLYMCPTNGGLQDPRLKPPAEDLARLGCERVLIFVAEKDFLKP--VAMNYYEDLKKSGWKGTVELVETHGEG 168 (195)
Q Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~pp~~i~~g~~D~l~~--~~~~~~~~l~~~~~g~~~~~~~~~g~~ 168 (195)
. .++.+.+. |++++.|+.|.+++ ....+.++|++.. ....++++|+|.+
T Consensus 157 ~---------------------------~D~~~vk~-Pilfl~ae~D~~~p~~~v~~~ee~lk~~~-~~~~~v~~f~g~~ 207 (242)
T KOG3043|consen 157 S---------------------------ADIANVKA-PILFLFAELDEDVPPKDVKAWEEKLKENP-AVGSQVKTFSGVG 207 (242)
T ss_pred h---------------------------hHHhcCCC-CEEEEeecccccCCHHHHHHHHHHHhcCc-ccceeEEEcCCcc
Confidence 1 22333332 69999999999864 4677777888773 3456899999999
Q ss_pred ccccc--cCCCc----hHHHHHHHHHHHHHHhC
Q 039671 169 HSFYF--DNLKC----EKAVELINKFVSFITQL 195 (195)
Q Consensus 169 H~f~~--~~~~~----~~~~~~~~~~~~fl~~~ 195 (195)
|+|.. .+... ...++..+++++|++++
T Consensus 208 HGf~~~r~~~~~Ped~~~~eea~~~~~~Wf~~y 240 (242)
T KOG3043|consen 208 HGFVARRANISSPEDKKAAEEAYQRFISWFKHY 240 (242)
T ss_pred chhhhhccCCCChhHHHHHHHHHHHHHHHHHHh
Confidence 99974 22222 35567778889998763
No 34
>KOG2112 consensus Lysophospholipase [Lipid transport and metabolism]
Probab=99.30 E-value=4e-11 Score=86.57 Aligned_cols=132 Identities=23% Similarity=0.242 Sum_probs=96.6
Q ss_pred hHHHHHHHHHHHHHhccCCCCCCCCCCCCCCCceEEeeccchHHHHHHHHHHhccCCCCCCceeEEEeeccccCCCCccH
Q 039671 16 CYEDSWAALNWVASHAGGNGPEPWLNDHADFGRVFIGGGSAGGNIAHTLAFQVGSIGLPRVKLVGVIMVHPFFGGTSPEE 95 (195)
Q Consensus 16 ~~~D~~~a~~~l~~~~~~~~~~~~~~~~~d~~~i~l~G~S~Gg~la~~~a~~~~~~~~~~~~~~~~i~~~p~~~~~~~~~ 95 (195)
-+.-+.+.+.+|.++....+ ++.+||++.|.|+||.+|++.+..++. .+.+.+..+++......
T Consensus 70 ~~~~aa~~i~~Li~~e~~~G--------i~~~rI~igGfs~G~a~aL~~~~~~~~------~l~G~~~~s~~~p~~~~-- 133 (206)
T KOG2112|consen 70 GLHRAADNIANLIDNEPANG--------IPSNRIGIGGFSQGGALALYSALTYPK------ALGGIFALSGFLPRASI-- 133 (206)
T ss_pred HHHHHHHHHHHHHHHHHHcC--------CCccceeEcccCchHHHHHHHHhcccc------ccceeeccccccccchh--
Confidence 34555666777777766667 899999999999999999999998743 67788888887663211
Q ss_pred HHHHHhhCCCCCCCCCCCCCCChhhhcccCCCCEEEEEcCCccchhh--HHHHHHHHHhcCCCccEEEEEecCCCccccc
Q 039671 96 DEMWLYMCPTNGGLQDPRLKPPAEDLARLGCERVLIFVAEKDFLKPV--AMNYYEDLKKSGWKGTVELVETHGEGHSFYF 173 (195)
Q Consensus 96 ~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~pp~~i~~g~~D~l~~~--~~~~~~~l~~~~~g~~~~~~~~~g~~H~f~~ 173 (195)
..+...+... .+|++..||+.|++|+- .....+.|+.. +..++++.|+|..|..
T Consensus 134 --------------~~~~~~~~~~------~~~i~~~Hg~~d~~vp~~~g~~s~~~l~~~--~~~~~f~~y~g~~h~~-- 189 (206)
T KOG2112|consen 134 --------------GLPGWLPGVN------YTPILLCHGTADPLVPFRFGEKSAQFLKSL--GVRVTFKPYPGLGHST-- 189 (206)
T ss_pred --------------hccCCccccC------cchhheecccCCceeehHHHHHHHHHHHHc--CCceeeeecCCccccc--
Confidence 0011111001 34899999999999854 78888999999 7889999999999922
Q ss_pred cCCCchHHHHHHHHHHHHHHh
Q 039671 174 DNLKCEKAVELINKFVSFITQ 194 (195)
Q Consensus 174 ~~~~~~~~~~~~~~~~~fl~~ 194 (195)
..+-+.++..|+++
T Consensus 190 -------~~~e~~~~~~~~~~ 203 (206)
T KOG2112|consen 190 -------SPQELDDLKSWIKT 203 (206)
T ss_pred -------cHHHHHHHHHHHHH
Confidence 24566677777764
No 35
>TIGR03100 hydr1_PEP hydrolase, ortholog 1, exosortase system type 1 associated. This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 2, TIGR03101) of the same superfamily.
Probab=99.29 E-value=1e-10 Score=90.33 Aligned_cols=155 Identities=15% Similarity=0.191 Sum_probs=93.4
Q ss_pred CCCchHHHHHHHHHHHHHhccCCCCCCCCCCCCCCCceEEeeccchHHHHHHHHHHhccCCCCCCceeEEEeeccccCCC
Q 039671 12 PIPACYEDSWAALNWVASHAGGNGPEPWLNDHADFGRVFIGGGSAGGNIAHTLAFQVGSIGLPRVKLVGVIMVHPFFGGT 91 (195)
Q Consensus 12 ~~p~~~~D~~~a~~~l~~~~~~~~~~~~~~~~~d~~~i~l~G~S~Gg~la~~~a~~~~~~~~~~~~~~~~i~~~p~~~~~ 91 (195)
.+....+|+.++++++.+... ..++|+++|+|+||.+++.++... .+++++|+++|++...
T Consensus 77 ~~~~~~~d~~~~~~~l~~~~~------------g~~~i~l~G~S~Gg~~a~~~a~~~-------~~v~~lil~~p~~~~~ 137 (274)
T TIGR03100 77 GFEGIDADIAAAIDAFREAAP------------HLRRIVAWGLCDAASAALLYAPAD-------LRVAGLVLLNPWVRTE 137 (274)
T ss_pred CHHHHHHHHHHHHHHHHhhCC------------CCCcEEEEEECHHHHHHHHHhhhC-------CCccEEEEECCccCCc
Confidence 445567899999999987631 236799999999999998887653 2799999999997643
Q ss_pred Ccc--------------HHHHHHhhCCCCCC--------------CCCCCCCC--------ChhhhcccCCCCEEEEEcC
Q 039671 92 SPE--------------EDEMWLYMCPTNGG--------------LQDPRLKP--------PAEDLARLGCERVLIFVAE 135 (195)
Q Consensus 92 ~~~--------------~~~~~~~~~~~~~~--------------~~~~~~~p--------~~~~~~~~~~pp~~i~~g~ 135 (195)
... ...+|..+...... .......+ ....+..... |+++++|+
T Consensus 138 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-P~ll~~g~ 216 (274)
T TIGR03100 138 AAQAASRIRHYYLGQLLSADFWRKLLSGEVNLGSSLRGLGDALLKARQKGDEVAHGGLAERMKAGLERFQG-PVLFILSG 216 (274)
T ss_pred ccchHHHHHHHHHHHHhChHHHHHhcCCCccHHHHHHHHHHHHHhhhhcCCCcccchHHHHHHHHHHhcCC-cEEEEEcC
Confidence 321 01122211111000 00000000 1122223333 69999999
Q ss_pred CccchhhH-------HHHHHHHHhcCCCccEEEEEecCCCccccccCCCchHHHHHHHHHHHHHHh
Q 039671 136 KDFLKPVA-------MNYYEDLKKSGWKGTVELVETHGEGHSFYFDNLKCEKAVELINKFVSFITQ 194 (195)
Q Consensus 136 ~D~l~~~~-------~~~~~~l~~~~~g~~~~~~~~~g~~H~f~~~~~~~~~~~~~~~~~~~fl~~ 194 (195)
.|...+.. ..+.+.+.. ..+++..+++++|..... +..+++.+.+.+||++
T Consensus 217 ~D~~~~~~~~~~~~~~~~~~~l~~----~~v~~~~~~~~~H~l~~e----~~~~~v~~~i~~wL~~ 274 (274)
T TIGR03100 217 NDLTAQEFADSVLGEPAWRGALED----PGIERVEIDGADHTFSDR----VWREWVAARTTEWLRR 274 (274)
T ss_pred cchhHHHHHHHhccChhhHHHhhc----CCeEEEecCCCCcccccH----HHHHHHHHHHHHHHhC
Confidence 99876432 222222322 367899999999933221 3346788899999974
No 36
>TIGR03056 bchO_mg_che_rel putative magnesium chelatase accessory protein. Members of this family belong to the alpha/beta fold family hydrolases (PFAM model pfam00561). Members are found in bacterial genomes if and only if they encoded for anoxygenic photosynthetic systems similar to that of Rhodobacter capsulatus and other alpha-Proteobacteria. Members often are encoded in the same operon as subunits of the protoporphyrin IX magnesium chelatase, and were once designated BchO. No literature supports a role as an actual subunit of magnesium chelatase, but an accessory role is possible, as suggested by placement by its probable hydrolase activity.
Probab=99.27 E-value=3.2e-10 Score=86.89 Aligned_cols=55 Identities=18% Similarity=0.067 Sum_probs=40.0
Q ss_pred hHHHHHHHHHHHHHhccCCCCCCCCCCCCCCCceEEeeccchHHHHHHHHHHhccCCCCCCceeEEEeeccccC
Q 039671 16 CYEDSWAALNWVASHAGGNGPEPWLNDHADFGRVFIGGGSAGGNIAHTLAFQVGSIGLPRVKLVGVIMVHPFFG 89 (195)
Q Consensus 16 ~~~D~~~a~~~l~~~~~~~~~~~~~~~~~d~~~i~l~G~S~Gg~la~~~a~~~~~~~~~~~~~~~~i~~~p~~~ 89 (195)
-+++..+.+..+.+. .+.++++|+|||+||.+|+.++.+.++ ++++++++++...
T Consensus 77 ~~~~~~~~l~~~i~~-------------~~~~~~~lvG~S~Gg~~a~~~a~~~p~------~v~~~v~~~~~~~ 131 (278)
T TIGR03056 77 TLPSMAEDLSALCAA-------------EGLSPDGVIGHSAGAAIALRLALDGPV------TPRMVVGINAALM 131 (278)
T ss_pred CHHHHHHHHHHHHHH-------------cCCCCceEEEECccHHHHHHHHHhCCc------ccceEEEEcCccc
Confidence 455655555555554 334678999999999999999888653 6788888877543
No 37
>TIGR01840 esterase_phb esterase, PHB depolymerase family. This model describes a subfamily among lipases of the ab-hydrolase family. This subfamily includes bacterial depolymerases for poly(3-hydroxybutyrate) (PHB) and related polyhydroxyalkanoates (PHA), as well as acetyl xylan esterases, feruloyl esterases, and others from fungi.
Probab=99.24 E-value=4.4e-11 Score=88.91 Aligned_cols=121 Identities=15% Similarity=0.109 Sum_probs=74.7
Q ss_pred chHHHHHHHHHHHHHhccCCCCCCCCCCCCCCCceEEeeccchHHHHHHHHHHhccCCCCCCceeEEEeeccccCCCCcc
Q 039671 15 ACYEDSWAALNWVASHAGGNGPEPWLNDHADFGRVFIGGGSAGGNIAHTLAFQVGSIGLPRVKLVGVIMVHPFFGGTSPE 94 (195)
Q Consensus 15 ~~~~D~~~a~~~l~~~~~~~~~~~~~~~~~d~~~i~l~G~S~Gg~la~~~a~~~~~~~~~~~~~~~~i~~~p~~~~~~~~ 94 (195)
....|+...++++.++. + +|++||+|+|+|+||.+|+.++.+.++ .+++++.+++........
T Consensus 74 ~~~~~~~~~i~~~~~~~---~--------id~~~i~l~G~S~Gg~~a~~~a~~~p~------~~~~~~~~~g~~~~~~~~ 136 (212)
T TIGR01840 74 GEVESLHQLIDAVKANY---S--------IDPNRVYVTGLSAGGGMTAVLGCTYPD------VFAGGASNAGLPYGEASS 136 (212)
T ss_pred ccHHHHHHHHHHHHHhc---C--------cChhheEEEEECHHHHHHHHHHHhCch------hheEEEeecCCccccccc
Confidence 45678888888888753 3 899999999999999999999988754 688988888765332211
Q ss_pred HHHHHHhhCCCCCCCCCC-CCCCChhhhcccCCCCEEEEEcCCccch--hhHHHHHHHHHhc
Q 039671 95 EDEMWLYMCPTNGGLQDP-RLKPPAEDLARLGCERVLIFVAEKDFLK--PVAMNYYEDLKKS 153 (195)
Q Consensus 95 ~~~~~~~~~~~~~~~~~~-~~~p~~~~~~~~~~pp~~i~~g~~D~l~--~~~~~~~~~l~~~ 153 (195)
.......+.......... ......... ....||++|+||+.|.++ ..++.+.++|++.
T Consensus 137 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~p~~~i~hG~~D~vVp~~~~~~~~~~l~~~ 197 (212)
T TIGR01840 137 SISATPQMCTAATAASVCRLVRGMQSEY-NGPTPIMSVVHGDADYTVLPGNADEIRDAMLKV 197 (212)
T ss_pred chhhHhhcCCCCCHHHHHHHHhccCCcc-cCCCCeEEEEEcCCCceeCcchHHHHHHHHHHh
Confidence 000010000000000000 000000001 123467899999999987 4588888888876
No 38
>TIGR03695 menH_SHCHC 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase. This protein catalyzes the formation of SHCHC, or (1 R,6 R)-2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate, by elmination of pyruvate from 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate (SEPHCHC). Note that SHCHC synthase activity previously was attributed to MenD, which in fact is SEPHCHC synthase.
Probab=99.24 E-value=4.8e-10 Score=83.72 Aligned_cols=41 Identities=29% Similarity=0.324 Sum_probs=34.1
Q ss_pred CCCCceEEeeccchHHHHHHHHHHhccCCCCCCceeEEEeeccccCC
Q 039671 44 ADFGRVFIGGGSAGGNIAHTLAFQVGSIGLPRVKLVGVIMVHPFFGG 90 (195)
Q Consensus 44 ~d~~~i~l~G~S~Gg~la~~~a~~~~~~~~~~~~~~~~i~~~p~~~~ 90 (195)
.+.++++|+|||+||.+|+.++.+.++ .++++++++|....
T Consensus 67 ~~~~~~~l~G~S~Gg~ia~~~a~~~~~------~v~~lil~~~~~~~ 107 (251)
T TIGR03695 67 LGIEPFFLVGYSMGGRIALYYALQYPE------RVQGLILESGSPGL 107 (251)
T ss_pred cCCCeEEEEEeccHHHHHHHHHHhCch------heeeeEEecCCCCc
Confidence 456789999999999999999998754 78999998876543
No 39
>PLN02824 hydrolase, alpha/beta fold family protein
Probab=99.23 E-value=8.4e-10 Score=85.85 Aligned_cols=59 Identities=24% Similarity=0.202 Sum_probs=42.1
Q ss_pred CEEEEEcCCccchhhHHHHHHHHHhcCCCccEEEEEecCCCccccccCCCchHHHHHHHHHHHHHHhC
Q 039671 128 RVLIFVAEKDFLKPVAMNYYEDLKKSGWKGTVELVETHGEGHSFYFDNLKCEKAVELINKFVSFITQL 195 (195)
Q Consensus 128 p~~i~~g~~D~l~~~~~~~~~~l~~~~~g~~~~~~~~~g~~H~f~~~~~~~~~~~~~~~~~~~fl~~~ 195 (195)
|+++++|++|.+++.. ..+.+.+. ....+++++++++|.... +..+++.+.+.+|++++
T Consensus 236 P~lvi~G~~D~~~~~~--~~~~~~~~--~~~~~~~~i~~~gH~~~~-----e~p~~~~~~i~~fl~~~ 294 (294)
T PLN02824 236 PVLIAWGEKDPWEPVE--LGRAYANF--DAVEDFIVLPGVGHCPQD-----EAPELVNPLIESFVARH 294 (294)
T ss_pred CeEEEEecCCCCCChH--HHHHHHhc--CCccceEEeCCCCCChhh-----hCHHHHHHHHHHHHhcC
Confidence 6999999999887532 22334544 334689999999994432 34467888899999875
No 40
>PRK10985 putative hydrolase; Provisional
Probab=99.22 E-value=7.4e-11 Score=93.22 Aligned_cols=59 Identities=22% Similarity=0.186 Sum_probs=45.7
Q ss_pred chHHHHHHHHHHHHHhccCCCCCCCCCCCCCCCceEEeeccchHHHHHHHHHHhccCCCCCCceeEEEeeccccCC
Q 039671 15 ACYEDSWAALNWVASHAGGNGPEPWLNDHADFGRVFIGGGSAGGNIAHTLAFQVGSIGLPRVKLVGVIMVHPFFGG 90 (195)
Q Consensus 15 ~~~~D~~~a~~~l~~~~~~~~~~~~~~~~~d~~~i~l~G~S~Gg~la~~~a~~~~~~~~~~~~~~~~i~~~p~~~~ 90 (195)
...+|+..+++++.+. ....+++++|||+||++++.++...... ..+++++++++.+++
T Consensus 112 ~~~~D~~~~i~~l~~~-------------~~~~~~~~vG~S~GG~i~~~~~~~~~~~----~~~~~~v~i~~p~~~ 170 (324)
T PRK10985 112 GETEDARFFLRWLQRE-------------FGHVPTAAVGYSLGGNMLACLLAKEGDD----LPLDAAVIVSAPLML 170 (324)
T ss_pred CchHHHHHHHHHHHHh-------------CCCCCEEEEEecchHHHHHHHHHhhCCC----CCccEEEEEcCCCCH
Confidence 4579999999999886 3346799999999999888666665321 147888988888765
No 41
>PRK03592 haloalkane dehalogenase; Provisional
Probab=99.19 E-value=7.3e-10 Score=86.21 Aligned_cols=38 Identities=13% Similarity=0.274 Sum_probs=32.9
Q ss_pred CCCceEEeeccchHHHHHHHHHHhccCCCCCCceeEEEeecccc
Q 039671 45 DFGRVFIGGGSAGGNIAHTLAFQVGSIGLPRVKLVGVIMVHPFF 88 (195)
Q Consensus 45 d~~~i~l~G~S~Gg~la~~~a~~~~~~~~~~~~~~~~i~~~p~~ 88 (195)
..+++.|+|||+||.+|+.++.+.++ +++++|+++++.
T Consensus 91 ~~~~~~lvGhS~Gg~ia~~~a~~~p~------~v~~lil~~~~~ 128 (295)
T PRK03592 91 GLDDVVLVGHDWGSALGFDWAARHPD------RVRGIAFMEAIV 128 (295)
T ss_pred CCCCeEEEEECHHHHHHHHHHHhChh------heeEEEEECCCC
Confidence 34689999999999999999998865 899999999743
No 42
>PRK00870 haloalkane dehalogenase; Provisional
Probab=99.18 E-value=7.8e-10 Score=86.42 Aligned_cols=65 Identities=15% Similarity=0.182 Sum_probs=42.6
Q ss_pred cccCCCCEEEEEcCCccchhh-HHHHHHHHHhcCCCccEEEEEecCCCccccccCCCchHHHHHHHHHHHHHHhC
Q 039671 122 ARLGCERVLIFVAEKDFLKPV-AMNYYEDLKKSGWKGTVELVETHGEGHSFYFDNLKCEKAVELINKFVSFITQL 195 (195)
Q Consensus 122 ~~~~~pp~~i~~g~~D~l~~~-~~~~~~~l~~~~~g~~~~~~~~~g~~H~f~~~~~~~~~~~~~~~~~~~fl~~~ 195 (195)
..+++ |+++++|++|.+++. ...+.+.+.+. ..+++.++++++|... . +..+++.+.+.+|++++
T Consensus 236 ~~i~~-P~lii~G~~D~~~~~~~~~~~~~~~~~---~~~~~~~i~~~gH~~~-~----e~p~~~~~~l~~fl~~~ 301 (302)
T PRK00870 236 ERWDK-PFLTAFSDSDPITGGGDAILQKRIPGA---AGQPHPTIKGAGHFLQ-E----DSGEELAEAVLEFIRAT 301 (302)
T ss_pred hcCCC-ceEEEecCCCCcccCchHHHHhhcccc---cccceeeecCCCccch-h----hChHHHHHHHHHHHhcC
Confidence 33444 599999999988753 33343444322 1234788999999543 2 33468888899999864
No 43
>TIGR03611 RutD pyrimidine utilization protein D. This protein is observed in operons extremely similar to that characterized in E. coli K-12 responsible for the import and catabolism of pyrimidines, primarily uracil. This protein is a member of the hydrolase, alpha/beta fold family defined by pfam00067.
Probab=99.17 E-value=4.7e-10 Score=84.64 Aligned_cols=133 Identities=17% Similarity=0.309 Sum_probs=77.9
Q ss_pred CCCCceEEeeccchHHHHHHHHHHhccCCCCCCceeEEEeeccccCCCCccHH------HHHH-------------hhCC
Q 039671 44 ADFGRVFIGGGSAGGNIAHTLAFQVGSIGLPRVKLVGVIMVHPFFGGTSPEED------EMWL-------------YMCP 104 (195)
Q Consensus 44 ~d~~~i~l~G~S~Gg~la~~~a~~~~~~~~~~~~~~~~i~~~p~~~~~~~~~~------~~~~-------------~~~~ 104 (195)
.+..+++|+|+|+||.+|+.++.+.++ .++++|+++++......... .... .+.+
T Consensus 77 ~~~~~~~l~G~S~Gg~~a~~~a~~~~~------~v~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (257)
T TIGR03611 77 LNIERFHFVGHALGGLIGLQLALRYPE------RLLSLVLINAWSRPDPHTRRCFDVRIALLQHAGPEAYVHAQALFLYP 150 (257)
T ss_pred hCCCcEEEEEechhHHHHHHHHHHChH------HhHHheeecCCCCCChhHHHHHHHHHHHHhccCcchhhhhhhhhhcc
Confidence 345689999999999999999887654 68999998886654221100 0000 0000
Q ss_pred C-----C-C---CCCC---CCCCC---------------ChhhhcccCCCCEEEEEcCCccchhh--HHHHHHHHHhcCC
Q 039671 105 T-----N-G---GLQD---PRLKP---------------PAEDLARLGCERVLIFVAEKDFLKPV--AMNYYEDLKKSGW 155 (195)
Q Consensus 105 ~-----~-~---~~~~---~~~~p---------------~~~~~~~~~~pp~~i~~g~~D~l~~~--~~~~~~~l~~~~~ 155 (195)
. . . .... ..... ....+.... .|+++++|+.|.+++. +..+.+.+
T Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~-~P~l~i~g~~D~~~~~~~~~~~~~~~----- 224 (257)
T TIGR03611 151 ADWISENAARLAADEAHALAHFPGKANVLRRINALEAFDVSARLDRIQ-HPVLLIANRDDMLVPYTQSLRLAAAL----- 224 (257)
T ss_pred ccHhhccchhhhhhhhhcccccCccHHHHHHHHHHHcCCcHHHhcccC-ccEEEEecCcCcccCHHHHHHHHHhc-----
Confidence 0 0 0 0000 00000 011222333 3699999999988743 44444433
Q ss_pred CccEEEEEecCCCccccccCCCchHHHHHHHHHHHHHHh
Q 039671 156 KGTVELVETHGEGHSFYFDNLKCEKAVELINKFVSFITQ 194 (195)
Q Consensus 156 g~~~~~~~~~g~~H~f~~~~~~~~~~~~~~~~~~~fl~~ 194 (195)
...+++.+++++|.+.. +..+++.+.+.+||++
T Consensus 225 -~~~~~~~~~~~gH~~~~-----~~~~~~~~~i~~fl~~ 257 (257)
T TIGR03611 225 -PNAQLKLLPYGGHASNV-----TDPETFNRALLDFLKT 257 (257)
T ss_pred -CCceEEEECCCCCCccc-----cCHHHHHHHHHHHhcC
Confidence 24488889999996543 2346778888888863
No 44
>TIGR02427 protocat_pcaD 3-oxoadipate enol-lactonase. Members of this family are 3-oxoadipate enol-lactonase. Note that the substrate is known as 3-oxoadipate enol-lactone, 2-oxo-2,3-dihydrofuran-5-acetate, 4,5-Dihydro-5-oxofuran-2-acetate, and 5-oxo-4,5-dihydrofuran-2-acetate. The enzyme the catalyzes the fourth step in the protocatechuate degradation to beta-ketoadipate and then to succinyl-CoA and acetyl-CoA. 4-hydroxybenzoate, 3-hydroxybenzoate, and vanillate all can be converted in one step to protocatechuate. This enzyme also acts in catechol degradation. In genomes that catabolize both catechol and protocatechuate, two forms of this enzyme may be found. All members of the seed alignment for this model were chosen from within protocatechuate degradation operons of at least three genes of the pathway, from genomes with the complete pathway through beta-ketoadipate.
Probab=99.17 E-value=6.2e-10 Score=83.31 Aligned_cols=39 Identities=23% Similarity=0.273 Sum_probs=31.4
Q ss_pred CCCCceEEeeccchHHHHHHHHHHhccCCCCCCceeEEEeecccc
Q 039671 44 ADFGRVFIGGGSAGGNIAHTLAFQVGSIGLPRVKLVGVIMVHPFF 88 (195)
Q Consensus 44 ~d~~~i~l~G~S~Gg~la~~~a~~~~~~~~~~~~~~~~i~~~p~~ 88 (195)
.+.+++.|+|||+||.+++.++.+.++ ++++++++++..
T Consensus 76 ~~~~~v~liG~S~Gg~~a~~~a~~~p~------~v~~li~~~~~~ 114 (251)
T TIGR02427 76 LGIERAVFCGLSLGGLIAQGLAARRPD------RVRALVLSNTAA 114 (251)
T ss_pred hCCCceEEEEeCchHHHHHHHHHHCHH------HhHHHhhccCcc
Confidence 345689999999999999998888643 688888877654
No 45
>PLN02511 hydrolase
Probab=99.17 E-value=1.5e-10 Score=93.55 Aligned_cols=60 Identities=20% Similarity=0.185 Sum_probs=47.2
Q ss_pred CchHHHHHHHHHHHHHhccCCCCCCCCCCCCCCCceEEeeccchHHHHHHHHHHhccCCCCCCceeEEEeeccccCC
Q 039671 14 PACYEDSWAALNWVASHAGGNGPEPWLNDHADFGRVFIGGGSAGGNIAHTLAFQVGSIGLPRVKLVGVIMVHPFFGG 90 (195)
Q Consensus 14 p~~~~D~~~a~~~l~~~~~~~~~~~~~~~~~d~~~i~l~G~S~Gg~la~~~a~~~~~~~~~~~~~~~~i~~~p~~~~ 90 (195)
....+|+.++++++... ....+++++|+|+||++++.++.+.++. ..+++++++++..+.
T Consensus 153 ~~~~~Dl~~~i~~l~~~-------------~~~~~~~lvG~SlGg~i~~~yl~~~~~~----~~v~~~v~is~p~~l 212 (388)
T PLN02511 153 ASFTGDLRQVVDHVAGR-------------YPSANLYAAGWSLGANILVNYLGEEGEN----CPLSGAVSLCNPFDL 212 (388)
T ss_pred CCchHHHHHHHHHHHHH-------------CCCCCEEEEEechhHHHHHHHHHhcCCC----CCceEEEEECCCcCH
Confidence 35689999999999876 3346899999999999999888876541 137888888876654
No 46
>TIGR02240 PHA_depoly_arom poly(3-hydroxyalkanoate) depolymerase. This family consists of the polyhydroxyalkanoic acid (PHA) depolymerase of Pseudomonas oleovorans, Pseudomonas putida BM01, and related species. This enzyme is part of polyester storage and mobilization system as in many bacteria. However, species containing this enzyme are unusual in their capacity to produce aromatic polyesters when grown on carbon sources such as benzoic acid or phenylacetic acid.
Probab=99.17 E-value=1.2e-09 Score=84.24 Aligned_cols=131 Identities=17% Similarity=0.214 Sum_probs=75.9
Q ss_pred CCCceEEeeccchHHHHHHHHHHhccCCCCCCceeEEEeeccccCCC--CccHH---------HHH---------HhhCC
Q 039671 45 DFGRVFIGGGSAGGNIAHTLAFQVGSIGLPRVKLVGVIMVHPFFGGT--SPEED---------EMW---------LYMCP 104 (195)
Q Consensus 45 d~~~i~l~G~S~Gg~la~~~a~~~~~~~~~~~~~~~~i~~~p~~~~~--~~~~~---------~~~---------~~~~~ 104 (195)
+.+++.|+|||+||.+|+.++.+.++ +++++|++++..... ..... .+. .....
T Consensus 89 ~~~~~~LvG~S~GG~va~~~a~~~p~------~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (276)
T TIGR02240 89 DYGQVNAIGVSWGGALAQQFAHDYPE------RCKKLILAATAAGAVMVPGKPKVLMMMASPRRYIQPSHGIHIAPDIYG 162 (276)
T ss_pred CcCceEEEEECHHHHHHHHHHHHCHH------HhhheEEeccCCccccCCCchhHHHHhcCchhhhccccccchhhhhcc
Confidence 34679999999999999999998764 799999998775421 00000 000 00000
Q ss_pred CCCCCCC----C---CCC----------------C-ChhhhcccCCCCEEEEEcCCccchhh--HHHHHHHHHhcCCCcc
Q 039671 105 TNGGLQD----P---RLK----------------P-PAEDLARLGCERVLIFVAEKDFLKPV--AMNYYEDLKKSGWKGT 158 (195)
Q Consensus 105 ~~~~~~~----~---~~~----------------p-~~~~~~~~~~pp~~i~~g~~D~l~~~--~~~~~~~l~~~~~g~~ 158 (195)
....... . ... . ....+..+++ |+++++|++|.+++. ...+.+.+. .
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~-P~lii~G~~D~~v~~~~~~~l~~~~~------~ 235 (276)
T TIGR02240 163 GAFRRDPELAMAHASKVRSGGKLGYYWQLFAGLGWTSIHWLHKIQQ-PTLVLAGDDDPIIPLINMRLLAWRIP------N 235 (276)
T ss_pred ceeeccchhhhhhhhhcccCCCchHHHHHHHHcCCchhhHhhcCCC-CEEEEEeCCCCcCCHHHHHHHHHhCC------C
Confidence 0000000 0 000 0 0122344444 599999999998853 444444432 3
Q ss_pred EEEEEecCCCccccccCCCchHHHHHHHHHHHHHHh
Q 039671 159 VELVETHGEGHSFYFDNLKCEKAVELINKFVSFITQ 194 (195)
Q Consensus 159 ~~~~~~~g~~H~f~~~~~~~~~~~~~~~~~~~fl~~ 194 (195)
.+++++++ +|.... +..++..+.+.+|+++
T Consensus 236 ~~~~~i~~-gH~~~~-----e~p~~~~~~i~~fl~~ 265 (276)
T TIGR02240 236 AELHIIDD-GHLFLI-----TRAEAVAPIIMKFLAE 265 (276)
T ss_pred CEEEEEcC-CCchhh-----ccHHHHHHHHHHHHHH
Confidence 47778887 994432 3346777888888875
No 47
>PRK11071 esterase YqiA; Provisional
Probab=99.16 E-value=5.4e-10 Score=81.70 Aligned_cols=132 Identities=20% Similarity=0.149 Sum_probs=79.4
Q ss_pred HHHHHHHHHHHHHhccCCCCCCCCCCCCCCCceEEeeccchHHHHHHHHHHhccCCCCCCceeEEEeeccccCCCCccHH
Q 039671 17 YEDSWAALNWVASHAGGNGPEPWLNDHADFGRVFIGGGSAGGNIAHTLAFQVGSIGLPRVKLVGVIMVHPFFGGTSPEED 96 (195)
Q Consensus 17 ~~D~~~a~~~l~~~~~~~~~~~~~~~~~d~~~i~l~G~S~Gg~la~~~a~~~~~~~~~~~~~~~~i~~~p~~~~~~~~~~ 96 (195)
-+++.+.+..+.++ .+.+++.++|+|+||.+|+.++.+.+ . .+++++|..+...
T Consensus 44 ~~~~~~~l~~l~~~-------------~~~~~~~lvG~S~Gg~~a~~~a~~~~--------~-~~vl~~~~~~~~~---- 97 (190)
T PRK11071 44 PADAAELLESLVLE-------------HGGDPLGLVGSSLGGYYATWLSQCFM--------L-PAVVVNPAVRPFE---- 97 (190)
T ss_pred HHHHHHHHHHHHHH-------------cCCCCeEEEEECHHHHHHHHHHHHcC--------C-CEEEECCCCCHHH----
Confidence 35666777766665 34568999999999999999998863 1 3578888766311
Q ss_pred HHHHhhCCCCCC---CCCCCCCC-Ch--------hhhcccCCCCEEEEEcCCccchhh--HHHHHHHHHhcCCCccEEEE
Q 039671 97 EMWLYMCPTNGG---LQDPRLKP-PA--------EDLARLGCERVLIFVAEKDFLKPV--AMNYYEDLKKSGWKGTVELV 162 (195)
Q Consensus 97 ~~~~~~~~~~~~---~~~~~~~p-~~--------~~~~~~~~pp~~i~~g~~D~l~~~--~~~~~~~l~~~~~g~~~~~~ 162 (195)
..... .+.... .....++. .. ..+. .+. |++++||+.|.+++. +.++++ +. +..
T Consensus 98 ~~~~~-~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~i~-~~~-~v~iihg~~De~V~~~~a~~~~~---~~------~~~ 165 (190)
T PRK11071 98 LLTDY-LGENENPYTGQQYVLESRHIYDLKVMQIDPLE-SPD-LIWLLQQTGDEVLDYRQAVAYYA---AC------RQT 165 (190)
T ss_pred HHHHh-cCCcccccCCCcEEEcHHHHHHHHhcCCccCC-Chh-hEEEEEeCCCCcCCHHHHHHHHH---hc------ceE
Confidence 11111 111100 00011111 00 1111 111 588999999999864 444444 22 556
Q ss_pred EecCCCccccccCCCchHHHHHHHHHHHHHH
Q 039671 163 ETHGEGHSFYFDNLKCEKAVELINKFVSFIT 193 (195)
Q Consensus 163 ~~~g~~H~f~~~~~~~~~~~~~~~~~~~fl~ 193 (195)
+++|++|.|... ++..+.+.+|++
T Consensus 166 ~~~ggdH~f~~~-------~~~~~~i~~fl~ 189 (190)
T PRK11071 166 VEEGGNHAFVGF-------ERYFNQIVDFLG 189 (190)
T ss_pred EECCCCcchhhH-------HHhHHHHHHHhc
Confidence 789999988432 677788888874
No 48
>TIGR01250 pro_imino_pep_2 proline-specific peptidases, Bacillus coagulans-type subfamily. This model describes a subfamily of the alpha/beta fold family of hydrolases. Characterized members include prolinases (Pro-Xaa dipeptidase, EC 3.4.13.8), prolyl aminopeptidases (EC 3.4.11.5), and a leucyl aminopeptidase
Probab=99.16 E-value=1.4e-09 Score=83.17 Aligned_cols=53 Identities=23% Similarity=0.312 Sum_probs=39.5
Q ss_pred HHHHHHHHHHHHHhccCCCCCCCCCCCCCCCceEEeeccchHHHHHHHHHHhccCCCCCCceeEEEeecccc
Q 039671 17 YEDSWAALNWVASHAGGNGPEPWLNDHADFGRVFIGGGSAGGNIAHTLAFQVGSIGLPRVKLVGVIMVHPFF 88 (195)
Q Consensus 17 ~~D~~~a~~~l~~~~~~~~~~~~~~~~~d~~~i~l~G~S~Gg~la~~~a~~~~~~~~~~~~~~~~i~~~p~~ 88 (195)
+++..+.+..+.+. .+.++++|+|||+||.+++.++...+. +++++++.+++.
T Consensus 79 ~~~~~~~~~~~~~~-------------~~~~~~~liG~S~Gg~ia~~~a~~~p~------~v~~lvl~~~~~ 131 (288)
T TIGR01250 79 IDYFVDELEEVREK-------------LGLDKFYLLGHSWGGMLAQEYALKYGQ------HLKGLIISSMLD 131 (288)
T ss_pred HHHHHHHHHHHHHH-------------cCCCcEEEEEeehHHHHHHHHHHhCcc------ccceeeEecccc
Confidence 45555555555554 345679999999999999999988653 788999887754
No 49
>TIGR01607 PST-A Plasmodium subtelomeric family (PST-A). These genes are preferentially located in the subtelomeric regions of the chromosomes of both P. falciparum and P. yoelii.
Probab=99.15 E-value=6.1e-10 Score=88.30 Aligned_cols=175 Identities=17% Similarity=0.133 Sum_probs=93.6
Q ss_pred CCCchHHHHHHHHHHHHHhccC----CCC-CCCCCC--CCCCCceEEeeccchHHHHHHHHHHhccCC--CCCCceeEEE
Q 039671 12 PIPACYEDSWAALNWVASHAGG----NGP-EPWLND--HADFGRVFIGGGSAGGNIAHTLAFQVGSIG--LPRVKLVGVI 82 (195)
Q Consensus 12 ~~p~~~~D~~~a~~~l~~~~~~----~~~-~~~~~~--~~d~~~i~l~G~S~Gg~la~~~a~~~~~~~--~~~~~~~~~i 82 (195)
.+...++|+...++.+.++... +.+ ...+.+ +-...+++|+||||||.+++.++....... .....++|+|
T Consensus 100 ~~~~~v~Dl~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~GhSmGg~i~~~~~~~~~~~~~~~~~~~i~g~i 179 (332)
T TIGR01607 100 CFDDLVYDVIQYMNRINDSIILENETKSDDESYDIVNTKENRLPMYIIGLSMGGNIALRLLELLGKSNENNDKLNIKGCI 179 (332)
T ss_pred hHHHHHHHHHHHHHHhhhhhccccccccccccccccccccCCCceeEeeccCccHHHHHHHHHhccccccccccccceEE
Confidence 4556678888888877652100 000 000000 011357999999999999998876543211 0012588999
Q ss_pred eeccccCCCCc-------c---HH---HHHHhhCCCCCC----------------CCCCCC-----CC--Ch--------
Q 039671 83 MVHPFFGGTSP-------E---ED---EMWLYMCPTNGG----------------LQDPRL-----KP--PA-------- 118 (195)
Q Consensus 83 ~~~p~~~~~~~-------~---~~---~~~~~~~~~~~~----------------~~~~~~-----~p--~~-------- 118 (195)
+.+|++..... . .. .....+.+.... ..++.. +. ..
T Consensus 180 ~~s~~~~i~~~~~~~~~~~~~~~~~l~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~Dp~~~~~~~s~~~~~~l~~~~~~ 259 (332)
T TIGR01607 180 SLSGMISIKSVGSDDSFKFKYFYLPVMNFMSRVFPTFRISKKIRYEKSPYVNDIIKFDKFRYDGGITFNLASELIKATDT 259 (332)
T ss_pred EeccceEEecccCCCcchhhhhHHHHHHHHHHHCCcccccCccccccChhhhhHHhcCccccCCcccHHHHHHHHHHHHH
Confidence 99998643210 0 00 001112121100 001111 11 00
Q ss_pred --hhhcccC-CCCEEEEEcCCccchhh--HHHHHHHHHhcCCCccEEEEEecCCCccccccCCCchHHHHHHHHHHHHHH
Q 039671 119 --EDLARLG-CERVLIFVAEKDFLKPV--AMNYYEDLKKSGWKGTVELVETHGEGHSFYFDNLKCEKAVELINKFVSFIT 193 (195)
Q Consensus 119 --~~~~~~~-~pp~~i~~g~~D~l~~~--~~~~~~~l~~~~~g~~~~~~~~~g~~H~f~~~~~~~~~~~~~~~~~~~fl~ 193 (195)
..+.... .-|+++++|++|.+++. +..+.+++.. ..+++++++|+.|...... ..+++++.+.+||+
T Consensus 260 ~~~~~~~i~~~~P~Lii~G~~D~vv~~~~~~~~~~~~~~----~~~~l~~~~g~~H~i~~E~----~~~~v~~~i~~wL~ 331 (332)
T TIGR01607 260 LDCDIDYIPKDIPILFIHSKGDCVCSYEGTVSFYNKLSI----SNKELHTLEDMDHVITIEP----GNEEVLKKIIEWIS 331 (332)
T ss_pred HHhhHhhCCCCCCEEEEEeCCCCccCHHHHHHHHHhccC----CCcEEEEECCCCCCCccCC----CHHHHHHHHHHHhh
Confidence 0111111 13799999999998853 4444444322 2568899999999655432 24788899999986
Q ss_pred h
Q 039671 194 Q 194 (195)
Q Consensus 194 ~ 194 (195)
.
T Consensus 332 ~ 332 (332)
T TIGR01607 332 N 332 (332)
T ss_pred C
Confidence 3
No 50
>KOG2281 consensus Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Posttranslational modification, protein turnover, chaperones]
Probab=99.15 E-value=6.1e-10 Score=91.95 Aligned_cols=153 Identities=18% Similarity=0.097 Sum_probs=105.4
Q ss_pred chHHHHHHHHHHHHHhccCCCCCCCCCCCCCCCceEEeeccchHHHHHHHHHHhccCCCCCCceeEEEeeccccCCCCc-
Q 039671 15 ACYEDSWAALNWVASHAGGNGPEPWLNDHADFGRVFIGGGSAGGNIAHTLAFQVGSIGLPRVKLVGVIMVHPFFGGTSP- 93 (195)
Q Consensus 15 ~~~~D~~~a~~~l~~~~~~~~~~~~~~~~~d~~~i~l~G~S~Gg~la~~~a~~~~~~~~~~~~~~~~i~~~p~~~~~~~- 93 (195)
..++|-..+++||.++.. + +|.+||+|-|+|.||+|++....+.++ -++++|.-+|+.+-..-
T Consensus 705 VE~eDQVeglq~Laeq~g-f---------idmdrV~vhGWSYGGYLSlm~L~~~P~------IfrvAIAGapVT~W~~YD 768 (867)
T KOG2281|consen 705 VEVEDQVEGLQMLAEQTG-F---------IDMDRVGVHGWSYGGYLSLMGLAQYPN------IFRVAIAGAPVTDWRLYD 768 (867)
T ss_pred eeehhhHHHHHHHHHhcC-c---------ccchheeEeccccccHHHHHHhhcCcc------eeeEEeccCcceeeeeec
Confidence 356899999999999865 2 899999999999999999999888864 67888888888765211
Q ss_pred --cHHHHHHhhCCCCCCCCC-CCCCC---ChhhhcccCCCCEEEEEcCCccch--hhHHHHHHHHHhcCCCccEEEEEec
Q 039671 94 --EEDEMWLYMCPTNGGLQD-PRLKP---PAEDLARLGCERVLIFVAEKDFLK--PVAMNYYEDLKKSGWKGTVELVETH 165 (195)
Q Consensus 94 --~~~~~~~~~~~~~~~~~~-~~~~p---~~~~~~~~~~pp~~i~~g~~D~l~--~~~~~~~~~l~~~~~g~~~~~~~~~ 165 (195)
..+.+. +.....+. ...+. ..+.+.+.+ -.++++||--|.-| ...-++...|-++ |.++++.+||
T Consensus 769 TgYTERYM----g~P~~nE~gY~agSV~~~Veklpdep-nRLlLvHGliDENVHF~Hts~Lvs~lvka--gKpyeL~IfP 841 (867)
T KOG2281|consen 769 TGYTERYM----GYPDNNEHGYGAGSVAGHVEKLPDEP-NRLLLVHGLIDENVHFAHTSRLVSALVKA--GKPYELQIFP 841 (867)
T ss_pred ccchhhhc----CCCccchhcccchhHHHHHhhCCCCC-ceEEEEecccccchhhhhHHHHHHHHHhC--CCceEEEEcc
Confidence 111111 11111111 11221 334444331 14999999999766 4577888999999 8999999999
Q ss_pred CCCccccccCCCchHHHHHHHHHHHHHHh
Q 039671 166 GEGHSFYFDNLKCEKAVELINKFVSFITQ 194 (195)
Q Consensus 166 g~~H~f~~~~~~~~~~~~~~~~~~~fl~~ 194 (195)
+.-|...... ...-.-.++..|+.+
T Consensus 842 ~ERHsiR~~e----s~~~yE~rll~FlQ~ 866 (867)
T KOG2281|consen 842 NERHSIRNPE----SGIYYEARLLHFLQE 866 (867)
T ss_pred ccccccCCCc----cchhHHHHHHHHHhh
Confidence 9999664432 223444567777765
No 51
>TIGR01836 PHA_synth_III_C poly(R)-hydroxyalkanoic acid synthase, class III, PhaC subunit. This model represents the PhaC subunit of a heterodimeric form of polyhydroxyalkanoic acid (PHA) synthase. Excepting the PhaC of Bacillus megaterium (which needs PhaR), all members require PhaE (TIGR01834) for activity and are designated class III. This enzyme builds ester polymers for carbon and energy storage that accumulate in inclusions, and both this enzyme and the depolymerase associate with the inclusions. Class III enzymes polymerize short-chain-length hydroxyalkanoates.
Probab=99.15 E-value=1.5e-09 Score=86.76 Aligned_cols=55 Identities=9% Similarity=0.100 Sum_probs=44.9
Q ss_pred HHHHHHHHHHHHhccCCCCCCCCCCCCCCCceEEeeccchHHHHHHHHHHhccCCCCCCceeEEEeeccccCCC
Q 039671 18 EDSWAALNWVASHAGGNGPEPWLNDHADFGRVFIGGGSAGGNIAHTLAFQVGSIGLPRVKLVGVIMVHPFFGGT 91 (195)
Q Consensus 18 ~D~~~a~~~l~~~~~~~~~~~~~~~~~d~~~i~l~G~S~Gg~la~~~a~~~~~~~~~~~~~~~~i~~~p~~~~~ 91 (195)
+|+.++++++.+. ...+++.++|||+||.+++.++...++ +++++++++|.++..
T Consensus 120 ~~~~~~v~~l~~~-------------~~~~~i~lvGhS~GG~i~~~~~~~~~~------~v~~lv~~~~p~~~~ 174 (350)
T TIGR01836 120 GYIDKCVDYICRT-------------SKLDQISLLGICQGGTFSLCYAALYPD------KIKNLVTMVTPVDFE 174 (350)
T ss_pred HHHHHHHHHHHHH-------------hCCCcccEEEECHHHHHHHHHHHhCch------heeeEEEeccccccC
Confidence 3478889999887 445789999999999999988777643 789999999888754
No 52
>TIGR03343 biphenyl_bphD 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase. Members of this family are 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase, or HOPD hydrolase, the BphD protein of biphenyl degradation. BphD acts on the product of ring meta-cleavage by BphC. Many species carrying bphC and bphD are capable of degrading polychlorinated biphenyls as well as biphenyl itself.
Probab=99.15 E-value=1.2e-09 Score=84.26 Aligned_cols=132 Identities=18% Similarity=0.266 Sum_probs=77.2
Q ss_pred CCCCceEEeeccchHHHHHHHHHHhccCCCCCCceeEEEeeccccCCCC-----c--cHHHHH---------------Hh
Q 039671 44 ADFGRVFIGGGSAGGNIAHTLAFQVGSIGLPRVKLVGVIMVHPFFGGTS-----P--EEDEMW---------------LY 101 (195)
Q Consensus 44 ~d~~~i~l~G~S~Gg~la~~~a~~~~~~~~~~~~~~~~i~~~p~~~~~~-----~--~~~~~~---------------~~ 101 (195)
.+.+++.++|||+||.+++.++.+.++ +++++++++|...... . ...... ..
T Consensus 98 l~~~~~~lvG~S~Gg~ia~~~a~~~p~------~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (282)
T TIGR03343 98 LDIEKAHLVGNSMGGATALNFALEYPD------RIGKLILMGPGGLGPSLFAPMPMEGIKLLFKLYAEPSYETLKQMLNV 171 (282)
T ss_pred cCCCCeeEEEECchHHHHHHHHHhChH------hhceEEEECCCCCCccccccCchHHHHHHHHHhcCCCHHHHHHHHhh
Confidence 456799999999999999999988754 7899999887532110 0 000000 00
Q ss_pred h-CCCC-CC-----------CCCC----------CCCC-----ChhhhcccCCCCEEEEEcCCccchhh--HHHHHHHHH
Q 039671 102 M-CPTN-GG-----------LQDP----------RLKP-----PAEDLARLGCERVLIFVAEKDFLKPV--AMNYYEDLK 151 (195)
Q Consensus 102 ~-~~~~-~~-----------~~~~----------~~~p-----~~~~~~~~~~pp~~i~~g~~D~l~~~--~~~~~~~l~ 151 (195)
+ .... .. ...+ ...+ ....+..+++ |+++++|+.|.+++. +..+.+.+
T Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~-Pvlli~G~~D~~v~~~~~~~~~~~~- 249 (282)
T TIGR03343 172 FLFDQSLITEELLQGRWENIQRQPEHLKNFLISSQKAPLSTWDVTARLGEIKA-KTLVTWGRDDRFVPLDHGLKLLWNM- 249 (282)
T ss_pred CccCcccCcHHHHHhHHHHhhcCHHHHHHHHHhccccccccchHHHHHhhCCC-CEEEEEccCCCcCCchhHHHHHHhC-
Confidence 0 0000 00 0000 0000 1112333444 599999999998753 44444444
Q ss_pred hcCCCccEEEEEecCCCccccccCCCchHHHHHHHHHHHHHH
Q 039671 152 KSGWKGTVELVETHGEGHSFYFDNLKCEKAVELINKFVSFIT 193 (195)
Q Consensus 152 ~~~~g~~~~~~~~~g~~H~f~~~~~~~~~~~~~~~~~~~fl~ 193 (195)
.+++++++++++|.... +..+.+.+.+.+||+
T Consensus 250 -----~~~~~~~i~~agH~~~~-----e~p~~~~~~i~~fl~ 281 (282)
T TIGR03343 250 -----PDAQLHVFSRCGHWAQW-----EHADAFNRLVIDFLR 281 (282)
T ss_pred -----CCCEEEEeCCCCcCCcc-----cCHHHHHHHHHHHhh
Confidence 34588999999995433 234577778888886
No 53
>PF05728 UPF0227: Uncharacterised protein family (UPF0227); InterPro: IPR008886 Despite being classed as uncharacterised proteins, the members of this family are almost certainly enzymes in that they contain a domain distantly related to IPR000073 from INTERPRO. One of the members of this family YqiA has been shown to be a esterase []. Other members, which include the Escherichia coli (strain K12) YcfP protein are uncharacterised.
Probab=99.14 E-value=1e-09 Score=79.65 Aligned_cols=138 Identities=20% Similarity=0.208 Sum_probs=81.6
Q ss_pred CchHHHHHHHHHHHHHhccCCCCCCCCCCCCCCCceEEeeccchHHHHHHHHHHhccCCCCCCceeEEEeeccccCCCCc
Q 039671 14 PACYEDSWAALNWVASHAGGNGPEPWLNDHADFGRVFIGGGSAGGNIAHTLAFQVGSIGLPRVKLVGVIMVHPFFGGTSP 93 (195)
Q Consensus 14 p~~~~D~~~a~~~l~~~~~~~~~~~~~~~~~d~~~i~l~G~S~Gg~la~~~a~~~~~~~~~~~~~~~~i~~~p~~~~~~~ 93 (195)
|...+++.+.+.-+.+. ...+.+.|+|.|+||+.|.+++.+.. +++ |++.|.+.+...
T Consensus 39 ~~~p~~a~~~l~~~i~~-------------~~~~~~~liGSSlGG~~A~~La~~~~--------~~a-vLiNPav~p~~~ 96 (187)
T PF05728_consen 39 PPFPEEAIAQLEQLIEE-------------LKPENVVLIGSSLGGFYATYLAERYG--------LPA-VLINPAVRPYEL 96 (187)
T ss_pred CcCHHHHHHHHHHHHHh-------------CCCCCeEEEEEChHHHHHHHHHHHhC--------CCE-EEEcCCCCHHHH
Confidence 44445555555555444 34455999999999999999998873 444 899999887443
Q ss_pred cHHHHHHhhCCCCCC---CCCCCCCC-Chhhhcc-----c-CCCCEEEEEcCCccchhhHHHHHHHHHhcCCCccEEEEE
Q 039671 94 EEDEMWLYMCPTNGG---LQDPRLKP-PAEDLAR-----L-GCERVLIFVAEKDFLKPVAMNYYEDLKKSGWKGTVELVE 163 (195)
Q Consensus 94 ~~~~~~~~~~~~~~~---~~~~~~~p-~~~~~~~-----~-~~pp~~i~~g~~D~l~~~~~~~~~~l~~~~~g~~~~~~~ 163 (195)
+ ..+.+.... .+...+.+ ....++. . ..-++++++++.|.+++..+.+ ++.+.. ...+
T Consensus 97 l-----~~~iG~~~~~~~~e~~~~~~~~~~~l~~l~~~~~~~~~~~lvll~~~DEvLd~~~a~-~~~~~~------~~~i 164 (187)
T PF05728_consen 97 L-----QDYIGEQTNPYTGESYELTEEHIEELKALEVPYPTNPERYLVLLQTGDEVLDYREAV-AKYRGC------AQII 164 (187)
T ss_pred H-----HHhhCccccCCCCccceechHhhhhcceEeccccCCCccEEEEEecCCcccCHHHHH-HHhcCc------eEEE
Confidence 2 222222110 01111111 1011110 1 1127999999999999874443 333222 4556
Q ss_pred ecCCCccccccCCCchHHHHHHHHHHHHH
Q 039671 164 THGEGHSFYFDNLKCEKAVELINKFVSFI 192 (195)
Q Consensus 164 ~~g~~H~f~~~~~~~~~~~~~~~~~~~fl 192 (195)
.+|++|.|..+ .+.+..+++|+
T Consensus 165 ~~ggdH~f~~f-------~~~l~~i~~f~ 186 (187)
T PF05728_consen 165 EEGGDHSFQDF-------EEYLPQIIAFL 186 (187)
T ss_pred EeCCCCCCccH-------HHHHHHHHHhh
Confidence 78889988544 57777888776
No 54
>PRK14875 acetoin dehydrogenase E2 subunit dihydrolipoyllysine-residue acetyltransferase; Provisional
Probab=99.14 E-value=3e-09 Score=85.25 Aligned_cols=149 Identities=19% Similarity=0.221 Sum_probs=85.6
Q ss_pred chHHHHHHHHHHHHHhccCCCCCCCCCCCCCCCceEEeeccchHHHHHHHHHHhccCCCCCCceeEEEeeccccCCCCcc
Q 039671 15 ACYEDSWAALNWVASHAGGNGPEPWLNDHADFGRVFIGGGSAGGNIAHTLAFQVGSIGLPRVKLVGVIMVHPFFGGTSPE 94 (195)
Q Consensus 15 ~~~~D~~~a~~~l~~~~~~~~~~~~~~~~~d~~~i~l~G~S~Gg~la~~~a~~~~~~~~~~~~~~~~i~~~p~~~~~~~~ 94 (195)
..++++.+.+..+.+. .+..+++|+|||+||.+|+.++.+.+. +++++++++|........
T Consensus 178 ~~~~~~~~~~~~~~~~-------------~~~~~~~lvG~S~Gg~~a~~~a~~~~~------~v~~lv~~~~~~~~~~~~ 238 (371)
T PRK14875 178 GSLDELAAAVLAFLDA-------------LGIERAHLVGHSMGGAVALRLAARAPQ------RVASLTLIAPAGLGPEIN 238 (371)
T ss_pred CCHHHHHHHHHHHHHh-------------cCCccEEEEeechHHHHHHHHHHhCch------heeEEEEECcCCcCcccc
Confidence 3456666666666554 556789999999999999988887643 789999988764321100
Q ss_pred ---------------HHHHHHhhCCCCCCC--------------C--------------CCCCCC--ChhhhcccCCCCE
Q 039671 95 ---------------EDEMWLYMCPTNGGL--------------Q--------------DPRLKP--PAEDLARLGCERV 129 (195)
Q Consensus 95 ---------------~~~~~~~~~~~~~~~--------------~--------------~~~~~p--~~~~~~~~~~pp~ 129 (195)
............... . ...... ....+..+++ |+
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~-Pv 317 (371)
T PRK14875 239 GDYIDGFVAAESRRELKPVLELLFADPALVTRQMVEDLLKYKRLDGVDDALRALADALFAGGRQRVDLRDRLASLAI-PV 317 (371)
T ss_pred hhHHHHhhcccchhHHHHHHHHHhcChhhCCHHHHHHHHHHhccccHHHHHHHHHHHhccCcccchhHHHHHhcCCC-CE
Confidence 000000000000000 0 000000 1112333343 59
Q ss_pred EEEEcCCccchhhHHHHHHHHHhcCCCccEEEEEecCCCccccccCCCchHHHHHHHHHHHHHHhC
Q 039671 130 LIFVAEKDFLKPVAMNYYEDLKKSGWKGTVELVETHGEGHSFYFDNLKCEKAVELINKFVSFITQL 195 (195)
Q Consensus 130 ~i~~g~~D~l~~~~~~~~~~l~~~~~g~~~~~~~~~g~~H~f~~~~~~~~~~~~~~~~~~~fl~~~ 195 (195)
++++|++|.+++... .+.+ ...++++++++++|.... +..++..+.+.+|++++
T Consensus 318 lii~g~~D~~vp~~~--~~~l-----~~~~~~~~~~~~gH~~~~-----e~p~~~~~~i~~fl~~~ 371 (371)
T PRK14875 318 LVIWGEQDRIIPAAH--AQGL-----PDGVAVHVLPGAGHMPQM-----EAAADVNRLLAEFLGKA 371 (371)
T ss_pred EEEEECCCCccCHHH--Hhhc-----cCCCeEEEeCCCCCChhh-----hCHHHHHHHHHHHhccC
Confidence 999999998875321 1222 234688999999994433 23356777788898763
No 55
>PF05448 AXE1: Acetyl xylan esterase (AXE1); InterPro: IPR008391 This family consists of several bacterial acetyl xylan esterase proteins. Acetyl xylan esterases are enzymes that hydrolyse the ester linkages of the acetyl groups in position 2 and/or 3 of the xylose moieties of natural acetylated xylan from hardwood. These enzymes are one of the accessory enzymes which are part of the xylanolytic system, together with xylanases, beta-xylosidases, alpha-arabinofuranosidases and methylglucuronidases; these are all required for the complete hydrolysis of xylan [].; PDB: 1VLQ_H 3M81_E 3M82_D 3M83_C 3FCY_A 1ODS_F 1ODT_C 1L7A_A 3FYT_A 2XLB_F ....
Probab=99.14 E-value=3.7e-10 Score=88.78 Aligned_cols=149 Identities=21% Similarity=0.206 Sum_probs=91.0
Q ss_pred chHHHHHHHHHHHHHhccCCCCCCCCCCCCCCCceEEeeccchHHHHHHHHHHhccCCCCCCceeEEEeeccccCCCCcc
Q 039671 15 ACYEDSWAALNWVASHAGGNGPEPWLNDHADFGRVFIGGGSAGGNIAHTLAFQVGSIGLPRVKLVGVIMVHPFFGGTSPE 94 (195)
Q Consensus 15 ~~~~D~~~a~~~l~~~~~~~~~~~~~~~~~d~~~i~l~G~S~Gg~la~~~a~~~~~~~~~~~~~~~~i~~~p~~~~~~~~ 94 (195)
..+.|+..|+++|.+..+ +|.+||++.|.|.||.+++.++.-.. +++++++.+|.+.-....
T Consensus 154 ~~~~D~~ravd~l~slpe-----------vD~~rI~v~G~SqGG~lal~~aaLd~-------rv~~~~~~vP~l~d~~~~ 215 (320)
T PF05448_consen 154 RVYLDAVRAVDFLRSLPE-----------VDGKRIGVTGGSQGGGLALAAAALDP-------RVKAAAADVPFLCDFRRA 215 (320)
T ss_dssp HHHHHHHHHHHHHHTSTT-----------EEEEEEEEEEETHHHHHHHHHHHHSS-------T-SEEEEESESSSSHHHH
T ss_pred HHHHHHHHHHHHHHhCCC-----------cCcceEEEEeecCchHHHHHHHHhCc-------cccEEEecCCCccchhhh
Confidence 467999999999998865 89999999999999999998888743 899999999976432111
Q ss_pred --------HHHHHHhhCC---CCCCCCC------CCCCCChhhhcccCCCCEEEEEcCCccchhhHHHHHHHHHhcCCCc
Q 039671 95 --------EDEMWLYMCP---TNGGLQD------PRLKPPAEDLARLGCERVLIFVAEKDFLKPVAMNYYEDLKKSGWKG 157 (195)
Q Consensus 95 --------~~~~~~~~~~---~~~~~~~------~~~~p~~~~~~~~~~pp~~i~~g~~D~l~~~~~~~~~~l~~~~~g~ 157 (195)
....+..++. ....... .++ ....+..--.-|+++..|-.|..++.+-.|+ ...+. +.
T Consensus 216 ~~~~~~~~~y~~~~~~~~~~d~~~~~~~~v~~~L~Y~--D~~nfA~ri~~pvl~~~gl~D~~cPP~t~fA-~yN~i--~~ 290 (320)
T PF05448_consen 216 LELRADEGPYPEIRRYFRWRDPHHEREPEVFETLSYF--DAVNFARRIKCPVLFSVGLQDPVCPPSTQFA-AYNAI--PG 290 (320)
T ss_dssp HHHT--STTTHHHHHHHHHHSCTHCHHHHHHHHHHTT---HHHHGGG--SEEEEEEETT-SSS-HHHHHH-HHCC----S
T ss_pred hhcCCccccHHHHHHHHhccCCCcccHHHHHHHHhhh--hHHHHHHHcCCCEEEEEecCCCCCCchhHHH-HHhcc--CC
Confidence 0011111111 0000000 011 1111111111279999999999998776663 34444 45
Q ss_pred cEEEEEecCCCccccccCCCchHHHHH-HHHHHHHHHhC
Q 039671 158 TVELVETHGEGHSFYFDNLKCEKAVEL-INKFVSFITQL 195 (195)
Q Consensus 158 ~~~~~~~~g~~H~f~~~~~~~~~~~~~-~~~~~~fl~~~ 195 (195)
+.++.++|..+|... ... .++.++||+++
T Consensus 291 ~K~l~vyp~~~He~~---------~~~~~~~~~~~l~~~ 320 (320)
T PF05448_consen 291 PKELVVYPEYGHEYG---------PEFQEDKQLNFLKEH 320 (320)
T ss_dssp SEEEEEETT--SSTT---------HHHHHHHHHHHHHH-
T ss_pred CeeEEeccCcCCCch---------hhHHHHHHHHHHhcC
Confidence 789999999999432 233 67788898875
No 56
>PLN02965 Probable pheophorbidase
Probab=99.13 E-value=8.6e-09 Score=78.61 Aligned_cols=35 Identities=23% Similarity=0.260 Sum_probs=30.3
Q ss_pred CceEEeeccchHHHHHHHHHHhccCCCCCCceeEEEeeccc
Q 039671 47 GRVFIGGGSAGGNIAHTLAFQVGSIGLPRVKLVGVIMVHPF 87 (195)
Q Consensus 47 ~~i~l~G~S~Gg~la~~~a~~~~~~~~~~~~~~~~i~~~p~ 87 (195)
+++.++|||+||.+++.++.+.++ +++++|++++.
T Consensus 72 ~~~~lvGhSmGG~ia~~~a~~~p~------~v~~lvl~~~~ 106 (255)
T PLN02965 72 HKVILVGHSIGGGSVTEALCKFTD------KISMAIYVAAA 106 (255)
T ss_pred CCEEEEecCcchHHHHHHHHhCch------heeEEEEEccc
Confidence 589999999999999999998754 78898888764
No 57
>COG2945 Predicted hydrolase of the alpha/beta superfamily [General function prediction only]
Probab=99.12 E-value=8.8e-10 Score=78.61 Aligned_cols=134 Identities=22% Similarity=0.255 Sum_probs=91.2
Q ss_pred CcCCCC--CCCCCC---chHHHHHHHHHHHHHhccCCCCCCCCCCCCCCCceEEeeccchHHHHHHHHHHhccCCCCCCc
Q 039671 3 VEYGLF--PDRPIP---ACYEDSWAALNWVASHAGGNGPEPWLNDHADFGRVFIGGGSAGGNIAHTLAFQVGSIGLPRVK 77 (195)
Q Consensus 3 ~~Yrla--p~~~~p---~~~~D~~~a~~~l~~~~~~~~~~~~~~~~~d~~~i~l~G~S~Gg~la~~~a~~~~~~~~~~~~ 77 (195)
+|||-- ++.+|. ..++|+.++++|++.+.. +.....|+|+|.|+.+++.++++.. .
T Consensus 66 fNfRgVG~S~G~fD~GiGE~~Da~aaldW~~~~hp------------~s~~~~l~GfSFGa~Ia~~la~r~~-------e 126 (210)
T COG2945 66 FNFRGVGRSQGEFDNGIGELEDAAAALDWLQARHP------------DSASCWLAGFSFGAYIAMQLAMRRP-------E 126 (210)
T ss_pred ecccccccccCcccCCcchHHHHHHHHHHHHhhCC------------CchhhhhcccchHHHHHHHHHHhcc-------c
Confidence 567653 445555 467999999999999843 3444689999999999999999975 4
Q ss_pred eeEEEeeccccCCCCccHHHHHHhhCCCCCCCCCCCCCCChhhhcccCCCCEEEEEcCCccchhhHHHHHHHHHhcCCCc
Q 039671 78 LVGVIMVHPFFGGTSPEEDEMWLYMCPTNGGLQDPRLKPPAEDLARLGCERVLIFVAEKDFLKPVAMNYYEDLKKSGWKG 157 (195)
Q Consensus 78 ~~~~i~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~pp~~i~~g~~D~l~~~~~~~~~~l~~~~~g~ 157 (195)
+...|+.+|..+..+. .-+...+. |.++++|+.|.+++ +.++|+-.- +.
T Consensus 127 ~~~~is~~p~~~~~df-------------------------s~l~P~P~-~~lvi~g~~Ddvv~----l~~~l~~~~-~~ 175 (210)
T COG2945 127 ILVFISILPPINAYDF-------------------------SFLAPCPS-PGLVIQGDADDVVD----LVAVLKWQE-SI 175 (210)
T ss_pred ccceeeccCCCCchhh-------------------------hhccCCCC-CceeEecChhhhhc----HHHHHHhhc-CC
Confidence 5677888887763110 01111111 69999999996665 444554332 46
Q ss_pred cEEEEEecCCCccccccCCCchHHHHHHHHHHHHH
Q 039671 158 TVELVETHGEGHSFYFDNLKCEKAVELINKFVSFI 192 (195)
Q Consensus 158 ~~~~~~~~g~~H~f~~~~~~~~~~~~~~~~~~~fl 192 (195)
+.++++.++++|.|.- +.....+.+.+|+
T Consensus 176 ~~~~i~i~~a~HFF~g------Kl~~l~~~i~~~l 204 (210)
T COG2945 176 KITVITIPGADHFFHG------KLIELRDTIADFL 204 (210)
T ss_pred CCceEEecCCCceecc------cHHHHHHHHHHHh
Confidence 7899999999995542 2245556666676
No 58
>PLN00021 chlorophyllase
Probab=99.11 E-value=3.7e-09 Score=82.97 Aligned_cols=145 Identities=23% Similarity=0.279 Sum_probs=86.8
Q ss_pred Cc-CCCCCCCCCCchHHHHHHHHHHHHHhccCCCCCCCCCCCCCCCceEEeeccchHHHHHHHHHHhccCCCCCCceeEE
Q 039671 3 VE-YGLFPDRPIPACYEDSWAALNWVASHAGGNGPEPWLNDHADFGRVFIGGGSAGGNIAHTLAFQVGSIGLPRVKLVGV 81 (195)
Q Consensus 3 ~~-Yrlap~~~~p~~~~D~~~a~~~l~~~~~~~~~~~~~~~~~d~~~i~l~G~S~Gg~la~~~a~~~~~~~~~~~~~~~~ 81 (195)
+| |++.|. .....++|+.++++|+.+....+.+. +...|.++++|+|||+||.+|+.++....+... +.+++++
T Consensus 85 pD~~g~~~~-~~~~~i~d~~~~~~~l~~~l~~~l~~---~~~~d~~~v~l~GHS~GG~iA~~lA~~~~~~~~-~~~v~al 159 (313)
T PLN00021 85 PQLYTLAGP-DGTDEIKDAAAVINWLSSGLAAVLPE---GVRPDLSKLALAGHSRGGKTAFALALGKAAVSL-PLKFSAL 159 (313)
T ss_pred ecCCCcCCC-CchhhHHHHHHHHHHHHhhhhhhccc---ccccChhheEEEEECcchHHHHHHHhhcccccc-ccceeeE
Confidence 44 344443 34566789999999998754321100 112678899999999999999999988764322 1368999
Q ss_pred EeeccccCCCCccHHHHHHhhCCCCCCCCCCCCCCChhhhcccCCCCEEEEEcCCcc-----c----hhhHHHHHHHHHh
Q 039671 82 IMVHPFFGGTSPEEDEMWLYMCPTNGGLQDPRLKPPAEDLARLGCERVLIFVAEKDF-----L----KPVAMNYYEDLKK 152 (195)
Q Consensus 82 i~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~pp~~i~~g~~D~-----l----~~~~~~~~~~l~~ 152 (195)
+++.|+...... ...........+.... +.. |++++.++.|. + .+......+.+.+
T Consensus 160 i~ldPv~g~~~~-----------~~~~p~il~~~~~s~~---~~~-P~liig~g~~~~~~~~~~p~~ap~~~~~~~f~~~ 224 (313)
T PLN00021 160 IGLDPVDGTSKG-----------KQTPPPVLTYAPHSFN---LDI-PVLVIGTGLGGEPRNPLFPPCAPDGVNHAEFFNE 224 (313)
T ss_pred Eeeccccccccc-----------cCCCCcccccCccccc---CCC-CeEEEecCCCcccccccccccCCCCCCHHHHHHh
Confidence 999998655211 0000000111121111 222 69999998763 1 1233332334444
Q ss_pred cCCCccEEEEEecCCCc
Q 039671 153 SGWKGTVELVETHGEGH 169 (195)
Q Consensus 153 ~~~g~~~~~~~~~g~~H 169 (195)
. +.+..+.+.++++|
T Consensus 225 ~--~~~~~~~~~~~~gH 239 (313)
T PLN00021 225 C--KAPAVHFVAKDYGH 239 (313)
T ss_pred c--CCCeeeeeecCCCc
Confidence 5 56778888999999
No 59
>PRK03204 haloalkane dehalogenase; Provisional
Probab=99.09 E-value=8e-09 Score=80.24 Aligned_cols=55 Identities=18% Similarity=0.328 Sum_probs=44.3
Q ss_pred chHHHHHHHHHHHHHhccCCCCCCCCCCCCCCCceEEeeccchHHHHHHHHHHhccCCCCCCceeEEEeecccc
Q 039671 15 ACYEDSWAALNWVASHAGGNGPEPWLNDHADFGRVFIGGGSAGGNIAHTLAFQVGSIGLPRVKLVGVIMVHPFF 88 (195)
Q Consensus 15 ~~~~D~~~a~~~l~~~~~~~~~~~~~~~~~d~~~i~l~G~S~Gg~la~~~a~~~~~~~~~~~~~~~~i~~~p~~ 88 (195)
..++|..+.+..+.+. .+.+++.++|||+||.+|+.++...++ +++++|++++..
T Consensus 82 ~~~~~~~~~~~~~~~~-------------~~~~~~~lvG~S~Gg~va~~~a~~~p~------~v~~lvl~~~~~ 136 (286)
T PRK03204 82 YQIDEHARVIGEFVDH-------------LGLDRYLSMGQDWGGPISMAVAVERAD------RVRGVVLGNTWF 136 (286)
T ss_pred cCHHHHHHHHHHHHHH-------------hCCCCEEEEEECccHHHHHHHHHhChh------heeEEEEECccc
Confidence 3468888888888776 445789999999999999999887654 899999877654
No 60
>PRK10673 acyl-CoA esterase; Provisional
Probab=99.09 E-value=6.8e-09 Score=78.77 Aligned_cols=59 Identities=15% Similarity=0.154 Sum_probs=41.9
Q ss_pred CEEEEEcCCccchhhHHHHHHHHHhcCCCccEEEEEecCCCccccccCCCchHHHHHHHHHHHHHHhC
Q 039671 128 RVLIFVAEKDFLKPVAMNYYEDLKKSGWKGTVELVETHGEGHSFYFDNLKCEKAVELINKFVSFITQL 195 (195)
Q Consensus 128 p~~i~~g~~D~l~~~~~~~~~~l~~~~~g~~~~~~~~~g~~H~f~~~~~~~~~~~~~~~~~~~fl~~~ 195 (195)
|+++++|+.|..++. ...+.+.+. ...+++.++++++|.+.. +..++..+.+.+||++.
T Consensus 197 P~l~i~G~~D~~~~~--~~~~~~~~~--~~~~~~~~~~~~gH~~~~-----~~p~~~~~~l~~fl~~~ 255 (255)
T PRK10673 197 PALFIRGGNSPYVTE--AYRDDLLAQ--FPQARAHVIAGAGHWVHA-----EKPDAVLRAIRRYLNDK 255 (255)
T ss_pred CeEEEECCCCCCCCH--HHHHHHHHh--CCCcEEEEeCCCCCeeec-----cCHHHHHHHHHHHHhcC
Confidence 699999999987743 233444444 345688999999994433 23467888899999763
No 61
>PRK10439 enterobactin/ferric enterobactin esterase; Provisional
Probab=99.09 E-value=1.4e-09 Score=88.32 Aligned_cols=107 Identities=17% Similarity=0.186 Sum_probs=76.3
Q ss_pred CCCCceEEeeccchHHHHHHHHHHhccCCCCCCceeEEEeeccccCCCCc---cHHHHHHhhCCCCCCCCCCCCCCChhh
Q 039671 44 ADFGRVFIGGGSAGGNIAHTLAFQVGSIGLPRVKLVGVIMVHPFFGGTSP---EEDEMWLYMCPTNGGLQDPRLKPPAED 120 (195)
Q Consensus 44 ~d~~~i~l~G~S~Gg~la~~~a~~~~~~~~~~~~~~~~i~~~p~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~p~~~~ 120 (195)
.|+++.+|+|.|+||..|++++.+.++ .+.+++++||.+-.... ....+...+. ...
T Consensus 285 ~d~~~~~IaG~S~GGl~AL~~al~~Pd------~Fg~v~s~Sgs~ww~~~~~~~~~~l~~~l~--------------~~~ 344 (411)
T PRK10439 285 DDADRTVVAGQSFGGLAALYAGLHWPE------RFGCVLSQSGSFWWPHRGGQQEGVLLEQLK--------------AGE 344 (411)
T ss_pred CCccceEEEEEChHHHHHHHHHHhCcc------cccEEEEeccceecCCccCCchhHHHHHHH--------------hcc
Confidence 588899999999999999999999865 89999999997632110 0000110000 000
Q ss_pred hcccCCCCEEEEEcCCc-cchhhHHHHHHHHHhcCCCccEEEEEecCCCcccccc
Q 039671 121 LARLGCERVLIFVAEKD-FLKPVAMNYYEDLKKSGWKGTVELVETHGEGHSFYFD 174 (195)
Q Consensus 121 ~~~~~~pp~~i~~g~~D-~l~~~~~~~~~~l~~~~~g~~~~~~~~~g~~H~f~~~ 174 (195)
... .-.+++|.+|+.| .+.+.++.+.+.|+++ |.++++.+++| +|++..+
T Consensus 345 ~~~-~~lr~~i~~G~~E~~~~~~~~~l~~~L~~~--G~~~~~~~~~G-GHd~~~W 395 (411)
T PRK10439 345 VSA-RGLRIVLEAGRREPMIMRANQALYAQLHPA--GHSVFWRQVDG-GHDALCW 395 (411)
T ss_pred cCC-CCceEEEeCCCCCchHHHHHHHHHHHHHHC--CCcEEEEECCC-CcCHHHH
Confidence 000 1125899999888 5667899999999999 89999999999 6987554
No 62
>TIGR01738 bioH putative pimeloyl-BioC--CoA transferase BioH. This CoA-binding enzyme is required for the production of pimeloyl-coenzyme A, the substrate of the BioF protein early in the biosynthesis of biotin. Its exact function is unknown, but is proposed in ref 2. This enzyme belongs to the alpha/beta hydrolase fold family (pfam model pfam00561). Members of this family are restricted to the Proteobacteria.
Probab=99.07 E-value=1.7e-09 Score=80.74 Aligned_cols=36 Identities=19% Similarity=0.138 Sum_probs=30.2
Q ss_pred CceEEeeccchHHHHHHHHHHhccCCCCCCceeEEEeecccc
Q 039671 47 GRVFIGGGSAGGNIAHTLAFQVGSIGLPRVKLVGVIMVHPFF 88 (195)
Q Consensus 47 ~~i~l~G~S~Gg~la~~~a~~~~~~~~~~~~~~~~i~~~p~~ 88 (195)
+++.++|||+||.+++.++.+.++ +++++|++++..
T Consensus 65 ~~~~lvG~S~Gg~~a~~~a~~~p~------~v~~~il~~~~~ 100 (245)
T TIGR01738 65 DPAIWLGWSLGGLVALHIAATHPD------RVRALVTVASSP 100 (245)
T ss_pred CCeEEEEEcHHHHHHHHHHHHCHH------hhheeeEecCCc
Confidence 589999999999999999988654 688988877643
No 63
>PLN02679 hydrolase, alpha/beta fold family protein
Probab=99.06 E-value=1.3e-08 Score=81.55 Aligned_cols=60 Identities=22% Similarity=0.424 Sum_probs=43.7
Q ss_pred CEEEEEcCCccchhhH---HHHHHHHHhcCCCccEEEEEecCCCccccccCCCchHHHHHHHHHHHHHHh
Q 039671 128 RVLIFVAEKDFLKPVA---MNYYEDLKKSGWKGTVELVETHGEGHSFYFDNLKCEKAVELINKFVSFITQ 194 (195)
Q Consensus 128 p~~i~~g~~D~l~~~~---~~~~~~l~~~~~g~~~~~~~~~g~~H~f~~~~~~~~~~~~~~~~~~~fl~~ 194 (195)
|+++++|++|.+++.. ..+.+.+.+. -.+++++++++++|.. .. +..+++.+.+.+||++
T Consensus 294 PtLii~G~~D~~~p~~~~~~~~~~~l~~~--ip~~~l~~i~~aGH~~-~~----E~Pe~~~~~I~~FL~~ 356 (360)
T PLN02679 294 PILVLWGDQDPFTPLDGPVGKYFSSLPSQ--LPNVTLYVLEGVGHCP-HD----DRPDLVHEKLLPWLAQ 356 (360)
T ss_pred CEEEEEeCCCCCcCchhhHHHHHHhhhcc--CCceEEEEcCCCCCCc-cc----cCHHHHHHHHHHHHHh
Confidence 5999999999887543 2344556555 3467999999999943 22 3456888889999976
No 64
>PF12697 Abhydrolase_6: Alpha/beta hydrolase family; PDB: 3LLC_A 3A2N_E 3A2M_A 3A2L_A 3AFI_F 3C5V_A 3C5W_P 3E0X_A 2ZJF_A 3QYJ_A ....
Probab=99.02 E-value=3e-09 Score=78.25 Aligned_cols=118 Identities=24% Similarity=0.298 Sum_probs=71.0
Q ss_pred CCCceEEeeccchHHHHHHHHHHhccCCCCCCceeEEEeeccccCCCC--------ccH----------------HHHHH
Q 039671 45 DFGRVFIGGGSAGGNIAHTLAFQVGSIGLPRVKLVGVIMVHPFFGGTS--------PEE----------------DEMWL 100 (195)
Q Consensus 45 d~~~i~l~G~S~Gg~la~~~a~~~~~~~~~~~~~~~~i~~~p~~~~~~--------~~~----------------~~~~~ 100 (195)
..++++|+|||+||.+++.++.+.++ +++++++++|...... ... ..+..
T Consensus 64 ~~~~~~lvG~S~Gg~~a~~~a~~~p~------~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 137 (228)
T PF12697_consen 64 GIKKVILVGHSMGGMIALRLAARYPD------RVKGLVLLSPPPPLPDSPSRSFGPSFIRRLLAWRSRSLRRLASRFFYR 137 (228)
T ss_dssp TTSSEEEEEETHHHHHHHHHHHHSGG------GEEEEEEESESSSHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cccccccccccccccccccccccccc------ccccceeecccccccccccccccchhhhhhhhcccccccccccccccc
Confidence 44789999999999999999988765 8999999999885321 010 00000
Q ss_pred hhCCCCCCC--CCC------C----CCC--ChhhhcccCCCCEEEEEcCCccchhhHHHHHHHHHhcCCCccEEEEEecC
Q 039671 101 YMCPTNGGL--QDP------R----LKP--PAEDLARLGCERVLIFVAEKDFLKPVAMNYYEDLKKSGWKGTVELVETHG 166 (195)
Q Consensus 101 ~~~~~~~~~--~~~------~----~~p--~~~~~~~~~~pp~~i~~g~~D~l~~~~~~~~~~l~~~~~g~~~~~~~~~g 166 (195)
.+....... ... . ... ....+..++. |+++++|+.|.+++ ....+.+.+. ..++++.++++
T Consensus 138 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-pvl~i~g~~D~~~~--~~~~~~~~~~--~~~~~~~~~~~ 212 (228)
T PF12697_consen 138 WFDGDEPEDLIRSSRRALAEYLRSNLWQADLSEALPRIKV-PVLVIHGEDDPIVP--PESAEELADK--LPNAELVVIPG 212 (228)
T ss_dssp HHTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHGSSS-EEEEEEETTSSSSH--HHHHHHHHHH--STTEEEEEETT
T ss_pred ccccccccccccccccccccccccccccccccccccccCC-CeEEeecCCCCCCC--HHHHHHHHHH--CCCCEEEEECC
Confidence 000000000 000 0 000 1122333333 69999999999886 3344555554 35679999999
Q ss_pred CCccccc
Q 039671 167 EGHSFYF 173 (195)
Q Consensus 167 ~~H~f~~ 173 (195)
++|....
T Consensus 213 ~gH~~~~ 219 (228)
T PF12697_consen 213 AGHFLFL 219 (228)
T ss_dssp SSSTHHH
T ss_pred CCCccHH
Confidence 9995433
No 65
>KOG2984 consensus Predicted hydrolase [General function prediction only]
Probab=99.01 E-value=6.4e-10 Score=80.01 Aligned_cols=154 Identities=19% Similarity=0.185 Sum_probs=97.9
Q ss_pred cCCCC--CCCCCCchH--HHHHHHHHHHHHhccCCCCCCCCCCCCCCCceEEeeccchHHHHHHHHHHhccCCCCCCcee
Q 039671 4 EYGLF--PDRPIPACY--EDSWAALNWVASHAGGNGPEPWLNDHADFGRVFIGGGSAGGNIAHTLAFQVGSIGLPRVKLV 79 (195)
Q Consensus 4 ~Yrla--p~~~~p~~~--~D~~~a~~~l~~~~~~~~~~~~~~~~~d~~~i~l~G~S~Gg~la~~~a~~~~~~~~~~~~~~ 79 (195)
.|..+ |+..|+.+. +|+..++.-+.. ++..++.|+|+|-||..|+.+|.+.++ .+.
T Consensus 81 GYG~SrPP~Rkf~~~ff~~Da~~avdLM~a--------------Lk~~~fsvlGWSdGgiTalivAak~~e------~v~ 140 (277)
T KOG2984|consen 81 GYGTSRPPERKFEVQFFMKDAEYAVDLMEA--------------LKLEPFSVLGWSDGGITALIVAAKGKE------KVN 140 (277)
T ss_pred CCCCCCCCcccchHHHHHHhHHHHHHHHHH--------------hCCCCeeEeeecCCCeEEEEeeccChh------hhh
Confidence 45554 788888765 899999998776 578899999999999999988888765 566
Q ss_pred EEEeeccccCCCCcc-----------------------------HHHHHHhhC-------CCCCCCCCCCCCCChhhhcc
Q 039671 80 GVIMVHPFFGGTSPE-----------------------------EDEMWLYMC-------PTNGGLQDPRLKPPAEDLAR 123 (195)
Q Consensus 80 ~~i~~~p~~~~~~~~-----------------------------~~~~~~~~~-------~~~~~~~~~~~~p~~~~~~~ 123 (195)
.+|.+..-.-..... ....|...+ ........... +..
T Consensus 141 rmiiwga~ayvn~~~~ma~kgiRdv~kWs~r~R~P~e~~Yg~e~f~~~wa~wvD~v~qf~~~~dG~fCr~~------lp~ 214 (277)
T KOG2984|consen 141 RMIIWGAAAYVNHLGAMAFKGIRDVNKWSARGRQPYEDHYGPETFRTQWAAWVDVVDQFHSFCDGRFCRLV------LPQ 214 (277)
T ss_pred hheeecccceecchhHHHHhchHHHhhhhhhhcchHHHhcCHHHHHHHHHHHHHHHHHHhhcCCCchHhhh------ccc
Confidence 666655433221110 111111110 00001001111 111
Q ss_pred cCCCCEEEEEcCCccchh-hHHHHHHHHHhcCCCccEEEEEecCCCccccccCCCchHHHHHHHHHHHHHHh
Q 039671 124 LGCERVLIFVAEKDFLKP-VAMNYYEDLKKSGWKGTVELVETHGEGHSFYFDNLKCEKAVELINKFVSFITQ 194 (195)
Q Consensus 124 ~~~pp~~i~~g~~D~l~~-~~~~~~~~l~~~~~g~~~~~~~~~g~~H~f~~~~~~~~~~~~~~~~~~~fl~~ 194 (195)
.++ |++|+||+.|+++. .-.-|...++.. .+++++|.+.|.|+.- -+++....+.+|++.
T Consensus 215 vkc-Ptli~hG~kDp~~~~~hv~fi~~~~~~-----a~~~~~peGkHn~hLr-----ya~eFnklv~dFl~~ 275 (277)
T KOG2984|consen 215 VKC-PTLIMHGGKDPFCGDPHVCFIPVLKSL-----AKVEIHPEGKHNFHLR-----YAKEFNKLVLDFLKS 275 (277)
T ss_pred ccC-CeeEeeCCcCCCCCCCCccchhhhccc-----ceEEEccCCCcceeee-----chHHHHHHHHHHHhc
Confidence 233 59999999999984 456666666544 3899999999988763 234566667788875
No 66
>PRK05371 x-prolyl-dipeptidyl aminopeptidase; Provisional
Probab=99.00 E-value=1e-08 Score=89.20 Aligned_cols=166 Identities=14% Similarity=0.137 Sum_probs=98.5
Q ss_pred CchHHHHHHHHHHHHHhccCCC----CCCCCCCCCCCCceEEeeccchHHHHHHHHHHhccCCCCCCceeEEEeeccccC
Q 039671 14 PACYEDSWAALNWVASHAGGNG----PEPWLNDHADFGRVFIGGGSAGGNIAHTLAFQVGSIGLPRVKLVGVIMVHPFFG 89 (195)
Q Consensus 14 p~~~~D~~~a~~~l~~~~~~~~----~~~~~~~~~d~~~i~l~G~S~Gg~la~~~a~~~~~~~~~~~~~~~~i~~~p~~~ 89 (195)
+...+|..++++||..+...+- -.+.... -...+|+++|.|+||.++..+|.... +.++++|..+++.+
T Consensus 302 ~~E~~D~~~vIeWl~~~~~~~~d~~~~~~~kq~-WsnGkVGm~G~SY~G~~~~~aAa~~p------p~LkAIVp~a~is~ 374 (767)
T PRK05371 302 YQEIESMKAVIDWLNGRATAYTDRTRGKEVKAD-WSNGKVAMTGKSYLGTLPNAVATTGV------EGLETIIPEAAISS 374 (767)
T ss_pred HHHHHHHHHHHHHHhhCCccccccccccccccC-CCCCeeEEEEEcHHHHHHHHHHhhCC------CcceEEEeeCCCCc
Confidence 6788999999999996532110 0000000 12469999999999999998887653 37899999888754
Q ss_pred CCCcc----------------HHHHHH--------------------hhCCCC---CCCCCCCCCC------Chhhhccc
Q 039671 90 GTSPE----------------EDEMWL--------------------YMCPTN---GGLQDPRLKP------PAEDLARL 124 (195)
Q Consensus 90 ~~~~~----------------~~~~~~--------------------~~~~~~---~~~~~~~~~p------~~~~~~~~ 124 (195)
..+.. ...+.. .+.... .........+ .......+
T Consensus 375 ~yd~yr~~G~~~~~~g~~ged~d~l~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~fW~~rn~~~~~~kI 454 (767)
T PRK05371 375 WYDYYRENGLVRAPGGYQGEDLDVLAELTYSRNLLAGDYLRHNEACEKLLAELTAAQDRKTGDYNDFWDDRNYLKDADKI 454 (767)
T ss_pred HHHHhhcCCceeccCCcCCcchhhHHHHhhhcccCcchhhcchHHHHHHHhhhhhhhhhcCCCccHHHHhCCHhhHhhCC
Confidence 32110 000000 000000 0000000111 11122233
Q ss_pred CCCCEEEEEcCCccchh--hHHHHHHHHHhcCCCccEEEEEecCCCccccccCCCchHHHHHHHHHHHHHHh
Q 039671 125 GCERVLIFVAEKDFLKP--VAMNYYEDLKKSGWKGTVELVETHGEGHSFYFDNLKCEKAVELINKFVSFITQ 194 (195)
Q Consensus 125 ~~pp~~i~~g~~D~l~~--~~~~~~~~l~~~~~g~~~~~~~~~g~~H~f~~~~~~~~~~~~~~~~~~~fl~~ 194 (195)
+. |+|++||..|..+. ++.++.++|++. +.+.++.+.++ +|..... ....++.+.+.+|+.+
T Consensus 455 kv-PvLlIhGw~D~~V~~~~s~~ly~aL~~~--g~pkkL~l~~g-~H~~~~~----~~~~d~~e~~~~Wfd~ 518 (767)
T PRK05371 455 KA-SVLVVHGLNDWNVKPKQVYQWWDALPEN--GVPKKLFLHQG-GHVYPNN----WQSIDFRDTMNAWFTH 518 (767)
T ss_pred CC-CEEEEeeCCCCCCChHHHHHHHHHHHhc--CCCeEEEEeCC-CccCCCc----hhHHHHHHHHHHHHHh
Confidence 43 69999999998874 688899999998 78889887777 6854221 1235666777778754
No 67
>PRK11126 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase; Provisional
Probab=98.99 E-value=1e-08 Score=77.22 Aligned_cols=39 Identities=28% Similarity=0.170 Sum_probs=31.6
Q ss_pred CCCceEEeeccchHHHHHHHHHHhccCCCCCCceeEEEeecccc
Q 039671 45 DFGRVFIGGGSAGGNIAHTLAFQVGSIGLPRVKLVGVIMVHPFF 88 (195)
Q Consensus 45 d~~~i~l~G~S~Gg~la~~~a~~~~~~~~~~~~~~~~i~~~p~~ 88 (195)
+.+++.++|||+||.+|+.++.+.++ .+++++++.++..
T Consensus 64 ~~~~~~lvG~S~Gg~va~~~a~~~~~-----~~v~~lvl~~~~~ 102 (242)
T PRK11126 64 NILPYWLVGYSLGGRIAMYYACQGLA-----GGLCGLIVEGGNP 102 (242)
T ss_pred CCCCeEEEEECHHHHHHHHHHHhCCc-----ccccEEEEeCCCC
Confidence 35789999999999999999998643 1488988887654
No 68
>KOG4409 consensus Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=98.97 E-value=1.5e-08 Score=78.72 Aligned_cols=41 Identities=22% Similarity=0.353 Sum_probs=36.4
Q ss_pred CCCceEEeeccchHHHHHHHHHHhccCCCCCCceeEEEeeccccCCC
Q 039671 45 DFGRVFIGGGSAGGNIAHTLAFQVGSIGLPRVKLVGVIMVHPFFGGT 91 (195)
Q Consensus 45 d~~~i~l~G~S~Gg~la~~~a~~~~~~~~~~~~~~~~i~~~p~~~~~ 91 (195)
...++.|+|||+||+||..+|.++++ +++.+||.+|+--..
T Consensus 158 ~L~KmilvGHSfGGYLaa~YAlKyPe------rV~kLiLvsP~Gf~~ 198 (365)
T KOG4409|consen 158 GLEKMILVGHSFGGYLAAKYALKYPE------RVEKLILVSPWGFPE 198 (365)
T ss_pred CCcceeEeeccchHHHHHHHHHhChH------hhceEEEeccccccc
Confidence 45699999999999999999999976 899999999986554
No 69
>PRK07581 hypothetical protein; Validated
Probab=98.96 E-value=1e-08 Score=81.44 Aligned_cols=52 Identities=13% Similarity=0.141 Sum_probs=39.5
Q ss_pred HHHHHHHHHHHHHhccCCCCCCCCCCCCCCCce-EEeeccchHHHHHHHHHHhccCCCCCCceeEEEeeccc
Q 039671 17 YEDSWAALNWVASHAGGNGPEPWLNDHADFGRV-FIGGGSAGGNIAHTLAFQVGSIGLPRVKLVGVIMVHPF 87 (195)
Q Consensus 17 ~~D~~~a~~~l~~~~~~~~~~~~~~~~~d~~~i-~l~G~S~Gg~la~~~a~~~~~~~~~~~~~~~~i~~~p~ 87 (195)
.+|+.+....+.+. ...+++ .|+|+|+||.+|+.++.++++ +++++|++++.
T Consensus 106 ~~~~~~~~~~l~~~-------------lgi~~~~~lvG~S~GG~va~~~a~~~P~------~V~~Lvli~~~ 158 (339)
T PRK07581 106 YDNVRAQHRLLTEK-------------FGIERLALVVGWSMGAQQTYHWAVRYPD------MVERAAPIAGT 158 (339)
T ss_pred HHHHHHHHHHHHHH-------------hCCCceEEEEEeCHHHHHHHHHHHHCHH------HHhhheeeecC
Confidence 46666555556655 345684 799999999999999999875 78888888654
No 70
>PLN02894 hydrolase, alpha/beta fold family protein
Probab=98.96 E-value=3.9e-08 Score=79.96 Aligned_cols=39 Identities=23% Similarity=0.330 Sum_probs=32.8
Q ss_pred CCCCceEEeeccchHHHHHHHHHHhccCCCCCCceeEEEeecccc
Q 039671 44 ADFGRVFIGGGSAGGNIAHTLAFQVGSIGLPRVKLVGVIMVHPFF 88 (195)
Q Consensus 44 ~d~~~i~l~G~S~Gg~la~~~a~~~~~~~~~~~~~~~~i~~~p~~ 88 (195)
.+.++++|+|||+||.+|+.++.+.++ +++++|+++|..
T Consensus 173 l~~~~~~lvGhS~GG~la~~~a~~~p~------~v~~lvl~~p~~ 211 (402)
T PLN02894 173 KNLSNFILLGHSFGGYVAAKYALKHPE------HVQHLILVGPAG 211 (402)
T ss_pred cCCCCeEEEEECHHHHHHHHHHHhCch------hhcEEEEECCcc
Confidence 345689999999999999999988754 789999988764
No 71
>cd00312 Esterase_lipase Esterases and lipases (includes fungal lipases, cholinesterases, etc.) These enzymes act on carboxylic esters (EC: 3.1.1.-). The catalytic apparatus involves three residues (catalytic triad): a serine, a glutamate or aspartate and a histidine.These catalytic residues are responsible for the nucleophilic attack on the carbonyl carbon atom of the ester bond. In contrast with other alpha/beta hydrolase fold family members, p-nitrobenzyl esterase and acetylcholine esterase have a Glu instead of Asp at the active site carboxylate.
Probab=98.96 E-value=3.4e-10 Score=94.27 Aligned_cols=78 Identities=28% Similarity=0.204 Sum_probs=62.8
Q ss_pred CCCcCCCCCC---------CCCCchHHHHHHHHHHHHHhccCCCCCCCCCCCCCCCceEEeeccchHHHHHHHHHHhccC
Q 039671 1 VSVEYGLFPD---------RPIPACYEDSWAALNWVASHAGGNGPEPWLNDHADFGRVFIGGGSAGGNIAHTLAFQVGSI 71 (195)
Q Consensus 1 ~~~~Yrlap~---------~~~p~~~~D~~~a~~~l~~~~~~~~~~~~~~~~~d~~~i~l~G~S~Gg~la~~~a~~~~~~ 71 (195)
|++||||.+- .+-+..+.|...|++|++++...++ .|+++|.|+|+|+||+++..++......
T Consensus 129 v~~~yRlg~~g~~~~~~~~~~~n~g~~D~~~al~wv~~~i~~fg--------gd~~~v~~~G~SaG~~~~~~~~~~~~~~ 200 (493)
T cd00312 129 VSINYRLGVLGFLSTGDIELPGNYGLKDQRLALKWVQDNIAAFG--------GDPDSVTIFGESAGGASVSLLLLSPDSK 200 (493)
T ss_pred EEecccccccccccCCCCCCCcchhHHHHHHHHHHHHHHHHHhC--------CCcceEEEEeecHHHHHhhhHhhCcchh
Confidence 4789998763 2334578999999999999999988 9999999999999999998877764322
Q ss_pred CCCCCceeEEEeeccccCC
Q 039671 72 GLPRVKLVGVIMVHPFFGG 90 (195)
Q Consensus 72 ~~~~~~~~~~i~~~p~~~~ 90 (195)
..++++|+.||....
T Consensus 201 ----~lf~~~i~~sg~~~~ 215 (493)
T cd00312 201 ----GLFHRAISQSGSALS 215 (493)
T ss_pred ----HHHHHHhhhcCCccC
Confidence 267888888876543
No 72
>PRK06765 homoserine O-acetyltransferase; Provisional
Probab=98.94 E-value=1.1e-07 Score=77.00 Aligned_cols=60 Identities=22% Similarity=0.303 Sum_probs=44.9
Q ss_pred CEEEEEcCCccchh--hHHHHHHHHHhcCCCccEEEEEecC-CCccccccCCCchHHHHHHHHHHHHHHh
Q 039671 128 RVLIFVAEKDFLKP--VAMNYYEDLKKSGWKGTVELVETHG-EGHSFYFDNLKCEKAVELINKFVSFITQ 194 (195)
Q Consensus 128 p~~i~~g~~D~l~~--~~~~~~~~l~~~~~g~~~~~~~~~g-~~H~f~~~~~~~~~~~~~~~~~~~fl~~ 194 (195)
|+++++|+.|.+++ ....+.+.+.+. +..++++++++ .+|.-.. ++.++..+.+.+|+++
T Consensus 325 PtLvI~G~~D~l~p~~~~~~la~~lp~~--~~~a~l~~I~s~~GH~~~l-----e~p~~~~~~I~~FL~~ 387 (389)
T PRK06765 325 NVLMIPCKQDLLQPPRYNYKMVDILQKQ--GKYAEVYEIESINGHMAGV-----FDIHLFEKKIYEFLNR 387 (389)
T ss_pred CEEEEEeCCCCCCCHHHHHHHHHHhhhc--CCCeEEEEECCCCCcchhh-----cCHHHHHHHHHHHHcc
Confidence 69999999998774 467777778766 45789999985 8994433 3345777778888864
No 73
>PRK10349 carboxylesterase BioH; Provisional
Probab=98.94 E-value=2.5e-08 Score=75.94 Aligned_cols=36 Identities=19% Similarity=0.231 Sum_probs=30.5
Q ss_pred CCceEEeeccchHHHHHHHHHHhccCCCCCCceeEEEeeccc
Q 039671 46 FGRVFIGGGSAGGNIAHTLAFQVGSIGLPRVKLVGVIMVHPF 87 (195)
Q Consensus 46 ~~~i~l~G~S~Gg~la~~~a~~~~~~~~~~~~~~~~i~~~p~ 87 (195)
.+++.++|||+||.+|+.++.+.+. +++++|++.+.
T Consensus 73 ~~~~~lvGhS~Gg~ia~~~a~~~p~------~v~~lili~~~ 108 (256)
T PRK10349 73 PDKAIWLGWSLGGLVASQIALTHPE------RVQALVTVASS 108 (256)
T ss_pred CCCeEEEEECHHHHHHHHHHHhChH------hhheEEEecCc
Confidence 4689999999999999999887654 78999988763
No 74
>COG0627 Predicted esterase [General function prediction only]
Probab=98.93 E-value=4.5e-09 Score=82.16 Aligned_cols=132 Identities=19% Similarity=0.209 Sum_probs=89.7
Q ss_pred CceEEeeccchHHHHHHHHHHhccCCCCCCceeEEEeeccccCCCCcc----------HHHHHHhhCCCCCCCCCCCCCC
Q 039671 47 GRVFIGGGSAGGNIAHTLAFQVGSIGLPRVKLVGVIMVHPFFGGTSPE----------EDEMWLYMCPTNGGLQDPRLKP 116 (195)
Q Consensus 47 ~~i~l~G~S~Gg~la~~~a~~~~~~~~~~~~~~~~i~~~p~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~p 116 (195)
++.+|+|+||||+-|+.+|.++++ +++.+..+||+++..... ....+..+.+...........|
T Consensus 152 ~~~aI~G~SMGG~GAl~lA~~~pd------~f~~~sS~Sg~~~~s~~~~~~~~~~~~~g~~~~~~~~G~~~~~~w~~~D~ 225 (316)
T COG0627 152 DGRAIAGHSMGGYGALKLALKHPD------RFKSASSFSGILSPSSPWGPTLAMGDPWGGKAFNAMLGPDSDPAWQENDP 225 (316)
T ss_pred CCceeEEEeccchhhhhhhhhCcc------hhceeccccccccccccccccccccccccCccHHHhcCCCccccccccCc
Confidence 389999999999999999999864 899999999999887322 1122222333322212222223
Q ss_pred --Chhhhccc----------CCCCEEEEEcCCccchh-h---HHHHHHHHHhcCCCccEEEEEecCCCccccccCCCchH
Q 039671 117 --PAEDLARL----------GCERVLIFVAEKDFLKP-V---AMNYYEDLKKSGWKGTVELVETHGEGHSFYFDNLKCEK 180 (195)
Q Consensus 117 --~~~~~~~~----------~~pp~~i~~g~~D~l~~-~---~~~~~~~l~~~~~g~~~~~~~~~g~~H~f~~~~~~~~~ 180 (195)
..+.+... ..+++++-+|..|.+.. . ...|.+++.+. |.+..+...+++.|.|..+
T Consensus 226 ~~~~~~l~~~~~~~~~~~~~~~~~~~~d~g~ad~~~~~~~~~~~~~~~a~~~~--g~~~~~~~~~~G~Hsw~~w------ 297 (316)
T COG0627 226 LSLIEKLVANANTRIWVYGGSPPELLIDNGPADFFLAANNLSTRAFAEALRAA--GIPNGVRDQPGGDHSWYFW------ 297 (316)
T ss_pred hhHHHHhhhcccccceecccCCCccccccccchhhhhhcccCHHHHHHHHHhc--CCCceeeeCCCCCcCHHHH------
Confidence 22221111 33578888999998764 3 88999999999 7888888889999998776
Q ss_pred HHHHHHHHHHHHH
Q 039671 181 AVELINKFVSFIT 193 (195)
Q Consensus 181 ~~~~~~~~~~fl~ 193 (195)
...+++.+.|+.
T Consensus 298 -~~~l~~~~~~~a 309 (316)
T COG0627 298 -ASQLADHLPWLA 309 (316)
T ss_pred -HHHHHHHHHHHH
Confidence 355555555553
No 75
>COG1505 Serine proteases of the peptidase family S9A [Amino acid transport and metabolism]
Probab=98.92 E-value=2.2e-09 Score=88.19 Aligned_cols=159 Identities=15% Similarity=0.112 Sum_probs=107.1
Q ss_pred CchHHHHHHHHHHHHHhccCCCCCCCCCCCCCCCceEEeeccchHHHHHHHHHHhccCCCCCCceeEEEeeccccCCCC-
Q 039671 14 PACYEDSWAALNWVASHAGGNGPEPWLNDHADFGRVFIGGGSAGGNIAHTLAFQVGSIGLPRVKLVGVIMVHPFFGGTS- 92 (195)
Q Consensus 14 p~~~~D~~~a~~~l~~~~~~~~~~~~~~~~~d~~~i~l~G~S~Gg~la~~~a~~~~~~~~~~~~~~~~i~~~p~~~~~~- 92 (195)
....+|..++.++|.++.- ..+++++|.|.|.||.|+....++.++ .+.++++-.|++||.-
T Consensus 478 q~vfdDf~AVaedLi~rgi-----------tspe~lgi~GgSNGGLLvg~alTQrPe------lfgA~v~evPllDMlRY 540 (648)
T COG1505 478 QNVFDDFIAVAEDLIKRGI-----------TSPEKLGIQGGSNGGLLVGAALTQRPE------LFGAAVCEVPLLDMLRY 540 (648)
T ss_pred hhhhHHHHHHHHHHHHhCC-----------CCHHHhhhccCCCCceEEEeeeccChh------hhCceeeccchhhhhhh
Confidence 4568999999999998853 688999999999999988777666654 7889999999999832
Q ss_pred --ccHHHHHHhhCCCCCCC----CCCCCCCChhhhcccCCCCEEEEEcCCccch-h-hHHHHHHHHHhcCCCccEEEEEe
Q 039671 93 --PEEDEMWLYMCPTNGGL----QDPRLKPPAEDLARLGCERVLIFVAEKDFLK-P-VAMNYYEDLKKSGWKGTVELVET 164 (195)
Q Consensus 93 --~~~~~~~~~~~~~~~~~----~~~~~~p~~~~~~~~~~pp~~i~~g~~D~l~-~-~~~~~~~~l~~~~~g~~~~~~~~ 164 (195)
......|..-.+....- .....||....-.+.+.||+||..|.+|..| + .++.|+.+|++. +.++-+.+-
T Consensus 541 h~l~aG~sW~~EYG~Pd~P~d~~~l~~YSPy~nl~~g~kYP~~LITTs~~DDRVHPaHarKfaa~L~e~--~~pv~~~e~ 618 (648)
T COG1505 541 HLLTAGSSWIAEYGNPDDPEDRAFLLAYSPYHNLKPGQKYPPTLITTSLHDDRVHPAHARKFAAKLQEV--GAPVLLREE 618 (648)
T ss_pred cccccchhhHhhcCCCCCHHHHHHHHhcCchhcCCccccCCCeEEEcccccccccchHHHHHHHHHHhc--CCceEEEee
Confidence 11233332222221111 1123455221122256899999999998665 3 499999999999 788888887
Q ss_pred cCCCccccccCCCchHHHHHHHHHHHHHHh
Q 039671 165 HGEGHSFYFDNLKCEKAVELINKFVSFITQ 194 (195)
Q Consensus 165 ~g~~H~f~~~~~~~~~~~~~~~~~~~fl~~ 194 (195)
-+++|+-.. ...+..+-...+..||.+
T Consensus 619 t~gGH~g~~---~~~~~A~~~a~~~afl~r 645 (648)
T COG1505 619 TKGGHGGAA---PTAEIARELADLLAFLLR 645 (648)
T ss_pred cCCcccCCC---ChHHHHHHHHHHHHHHHH
Confidence 788994321 112223333455566654
No 76
>PRK06489 hypothetical protein; Provisional
Probab=98.92 E-value=3.1e-08 Score=79.41 Aligned_cols=37 Identities=16% Similarity=0.117 Sum_probs=30.7
Q ss_pred CCCce-EEeeccchHHHHHHHHHHhccCCCCCCceeEEEeeccc
Q 039671 45 DFGRV-FIGGGSAGGNIAHTLAFQVGSIGLPRVKLVGVIMVHPF 87 (195)
Q Consensus 45 d~~~i-~l~G~S~Gg~la~~~a~~~~~~~~~~~~~~~~i~~~p~ 87 (195)
+.+++ +|+|+|+||.+|+.++.+.++ +++++|++++.
T Consensus 151 gi~~~~~lvG~SmGG~vAl~~A~~~P~------~V~~LVLi~s~ 188 (360)
T PRK06489 151 GVKHLRLILGTSMGGMHAWMWGEKYPD------FMDALMPMASQ 188 (360)
T ss_pred CCCceeEEEEECHHHHHHHHHHHhCch------hhheeeeeccC
Confidence 34566 489999999999999999865 78999988764
No 77
>PF08538 DUF1749: Protein of unknown function (DUF1749); InterPro: IPR013744 This is a plant and fungal family of unknown function. This family contains many hypothetical proteins. ; PDB: 2Q0X_B.
Probab=98.92 E-value=1.9e-09 Score=82.98 Aligned_cols=71 Identities=15% Similarity=0.179 Sum_probs=47.8
Q ss_pred CCCchHHHHHHHHHHHHHhccCCCCCCCCCCCCCCCceEEeeccchHHHHHHHHHHhccCCCCCCceeEEEeeccccCCC
Q 039671 12 PIPACYEDSWAALNWVASHAGGNGPEPWLNDHADFGRVFIGGGSAGGNIAHTLAFQVGSIGLPRVKLVGVIMVHPFFGGT 91 (195)
Q Consensus 12 ~~p~~~~D~~~a~~~l~~~~~~~~~~~~~~~~~d~~~i~l~G~S~Gg~la~~~a~~~~~~~~~~~~~~~~i~~~p~~~~~ 91 (195)
.+..-.+|+.++++||+...... ...++|+|+|||-|..-++.++.+..... ....+.|+|+.+|+.|-+
T Consensus 82 SL~~D~~eI~~~v~ylr~~~~g~---------~~~~kIVLmGHSTGcQdvl~Yl~~~~~~~-~~~~VdG~ILQApVSDRE 151 (303)
T PF08538_consen 82 SLDRDVEEIAQLVEYLRSEKGGH---------FGREKIVLMGHSTGCQDVLHYLSSPNPSP-SRPPVDGAILQAPVSDRE 151 (303)
T ss_dssp -HHHHHHHHHHHHHHHHHHS---------------S-EEEEEECCHHHHHHHHHHH-TT----CCCEEEEEEEEE---TT
T ss_pred hhhhHHHHHHHHHHHHHHhhccc---------cCCccEEEEecCCCcHHHHHHHhccCccc-cccceEEEEEeCCCCChh
Confidence 44567899999999999884210 25789999999999999998887765311 124899999999999875
Q ss_pred C
Q 039671 92 S 92 (195)
Q Consensus 92 ~ 92 (195)
.
T Consensus 152 a 152 (303)
T PF08538_consen 152 A 152 (303)
T ss_dssp S
T ss_pred H
Confidence 4
No 78
>TIGR03101 hydr2_PEP hydrolase, ortholog 2, exosortase system type 1 associated. This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 1, TIGR03100) of the same superfamily.
Probab=98.91 E-value=4.5e-08 Score=75.06 Aligned_cols=155 Identities=21% Similarity=0.202 Sum_probs=97.6
Q ss_pred CCCchHHHHHHHHHHHHHhccCCCCCCCCCCCCCCCceEEeeccchHHHHHHHHHHhccCCCCCCceeEEEeeccccCCC
Q 039671 12 PIPACYEDSWAALNWVASHAGGNGPEPWLNDHADFGRVFIGGGSAGGNIAHTLAFQVGSIGLPRVKLVGVIMVHPFFGGT 91 (195)
Q Consensus 12 ~~p~~~~D~~~a~~~l~~~~~~~~~~~~~~~~~d~~~i~l~G~S~Gg~la~~~a~~~~~~~~~~~~~~~~i~~~p~~~~~ 91 (195)
.+....+|+..+++|+.+. +..+|+|+|+|+||.+++.++.+.++ +++++|+++|+.+..
T Consensus 78 ~~~~~~~Dv~~ai~~L~~~--------------~~~~v~LvG~SmGG~vAl~~A~~~p~------~v~~lVL~~P~~~g~ 137 (266)
T TIGR03101 78 RWDVWKEDVAAAYRWLIEQ--------------GHPPVTLWGLRLGALLALDAANPLAA------KCNRLVLWQPVVSGK 137 (266)
T ss_pred CHHHHHHHHHHHHHHHHhc--------------CCCCEEEEEECHHHHHHHHHHHhCcc------ccceEEEeccccchH
Confidence 3445679999999999864 24689999999999999998877643 789999999998875
Q ss_pred CccHH----HHHHhhCCCCCCCCC-----------------CCCCC-ChhhhcccC-------CCCEEEEEcCC--cc-c
Q 039671 92 SPEED----EMWLYMCPTNGGLQD-----------------PRLKP-PAEDLARLG-------CERVLIFVAEK--DF-L 139 (195)
Q Consensus 92 ~~~~~----~~~~~~~~~~~~~~~-----------------~~~~p-~~~~~~~~~-------~pp~~i~~g~~--D~-l 139 (195)
..... +......+....... ..++| ....+...+ -++++++..+. |. .
T Consensus 138 ~~l~~~lrl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 217 (266)
T TIGR03101 138 QQLQQFLRLRLVARRLGGESAEASNSLRERLLAGEDVEIAGYELAPALASDLDQRQLAPAVPKNCPVHWFEVRPEEGATL 217 (266)
T ss_pred HHHHHHHHHHHHHHhccccccccchhHHhhccCCCeEEEeceecCHHHHHHHHhcccCCCCCCCCceEEEEeccccCCCC
Confidence 43311 111122222111000 11222 222222211 12466666533 32 4
Q ss_pred hhhHHHHHHHHHhcCCCccEEEEEecCCCccccccCCCchHHHHHHHHHHHH
Q 039671 140 KPVAMNYYEDLKKSGWKGTVELVETHGEGHSFYFDNLKCEKAVELINKFVSF 191 (195)
Q Consensus 140 ~~~~~~~~~~l~~~~~g~~~~~~~~~g~~H~f~~~~~~~~~~~~~~~~~~~f 191 (195)
.+...++++.+++. |+.++...++|. .|.... .+.+....++.+.++
T Consensus 218 ~~~~~~l~~~~~~~--g~~v~~~~~~~~--~~~~~~-~~~~~p~~~~~~~~~ 264 (266)
T TIGR03101 218 SPVFSRLGEQWVQS--GVEVTVDLVPGP--AFWQTQ-EIEEAPELIARTTAL 264 (266)
T ss_pred CHHHHHHHHHHHHc--CCeEeeeecCCc--hhhcch-hhhHhHHHHHHHHhh
Confidence 45688999999999 899999999996 565543 335556666665554
No 79
>PF10503 Esterase_phd: Esterase PHB depolymerase
Probab=98.89 E-value=1.5e-08 Score=75.30 Aligned_cols=115 Identities=18% Similarity=0.115 Sum_probs=66.7
Q ss_pred HHHHHHHHHHHHhccCCCCCCCCCCCCCCCceEEeeccchHHHHHHHHHHhccCCCCCCceeEEEeeccccCCCCccHHH
Q 039671 18 EDSWAALNWVASHAGGNGPEPWLNDHADFGRVFIGGGSAGGNIAHTLAFQVGSIGLPRVKLVGVIMVHPFFGGTSPEEDE 97 (195)
Q Consensus 18 ~D~~~a~~~l~~~~~~~~~~~~~~~~~d~~~i~l~G~S~Gg~la~~~a~~~~~~~~~~~~~~~~i~~~p~~~~~~~~~~~ 97 (195)
..+...++++..+. . +|++||++.|.|+||.|+..++..+++ .+.++..++++.-........
T Consensus 79 ~~i~~lv~~v~~~~---~--------iD~~RVyv~G~S~Gg~ma~~la~~~pd------~faa~a~~sG~~~~~a~~~~~ 141 (220)
T PF10503_consen 79 AFIAALVDYVAARY---N--------IDPSRVYVTGLSNGGMMANVLACAYPD------LFAAVAVVSGVPYGCAASGAS 141 (220)
T ss_pred hhHHHHHHhHhhhc---c--------cCCCceeeEEECHHHHHHHHHHHhCCc------cceEEEeecccccccccCccc
Confidence 34556666666554 4 999999999999999999999999865 889998888775432211111
Q ss_pred HHHhhCCCCCCCCCCCCCC--ChhhhcccCCCCEEEEEcCCccchh--hHHHHHHHHHh
Q 039671 98 MWLYMCPTNGGLQDPRLKP--PAEDLARLGCERVLIFVAEKDFLKP--VAMNYYEDLKK 152 (195)
Q Consensus 98 ~~~~~~~~~~~~~~~~~~p--~~~~~~~~~~pp~~i~~g~~D~l~~--~~~~~~~~l~~ 152 (195)
....+.............. ....... .|++|+||+.|..|. +.....+...+
T Consensus 142 a~~~m~~g~~~~p~~~~~a~~~~g~~~~---~P~~v~hG~~D~tV~~~n~~~~~~q~~~ 197 (220)
T PF10503_consen 142 ALSAMRSGPRPAPAAAWGARSDAGAYPG---YPRIVFHGTADTTVNPQNADQLVAQWLN 197 (220)
T ss_pred HHHHhhCCCCCChHHHHHhhhhccCCCC---CCEEEEecCCCCccCcchHHHHHHHHHH
Confidence 1111111100000000000 0011222 269999999998773 35555555443
No 80
>TIGR01249 pro_imino_pep_1 proline iminopeptidase, Neisseria-type subfamily. This model represents one of two related families of proline iminopeptidase in the alpha/beta fold hydrolase family. The fine specificities of the various members, including both the range of short peptides from which proline can be removed and whether other amino acids such as alanine can be also removed, may vary among members.
Probab=98.88 E-value=6.3e-08 Score=75.92 Aligned_cols=53 Identities=19% Similarity=0.184 Sum_probs=40.8
Q ss_pred hHHHHHHHHHHHHHhccCCCCCCCCCCCCCCCceEEeeccchHHHHHHHHHHhccCCCCCCceeEEEeeccc
Q 039671 16 CYEDSWAALNWVASHAGGNGPEPWLNDHADFGRVFIGGGSAGGNIAHTLAFQVGSIGLPRVKLVGVIMVHPF 87 (195)
Q Consensus 16 ~~~D~~~a~~~l~~~~~~~~~~~~~~~~~d~~~i~l~G~S~Gg~la~~~a~~~~~~~~~~~~~~~~i~~~p~ 87 (195)
.++|+.+.+..+.+. .+.++++++|+|+||.+++.++.+.++ +++++|+.++.
T Consensus 77 ~~~~~~~dl~~l~~~-------------l~~~~~~lvG~S~GG~ia~~~a~~~p~------~v~~lvl~~~~ 129 (306)
T TIGR01249 77 TTWDLVADIEKLREK-------------LGIKNWLVFGGSWGSTLALAYAQTHPE------VVTGLVLRGIF 129 (306)
T ss_pred CHHHHHHHHHHHHHH-------------cCCCCEEEEEECHHHHHHHHHHHHChH------hhhhheeeccc
Confidence 456777777766665 345689999999999999999988754 67888887654
No 81
>PF06500 DUF1100: Alpha/beta hydrolase of unknown function (DUF1100); InterPro: IPR010520 Proteins in this entry display esterase activity toward pNP-butyrate []. This entry also includes 2,6-dihydropseudooxynicotine hydrolase which has a role in nicotine catabolism by cleaving a C-C bond in 2,6-dihydroxypseudooxyicotine [, ].; PDB: 3OUR_A 3MVE_B 2JBW_C.
Probab=98.87 E-value=4.9e-08 Score=78.24 Aligned_cols=144 Identities=17% Similarity=0.092 Sum_probs=78.5
Q ss_pred HHHHHHHHHHhccCCCCCCCCCCCCCCCceEEeeccchHHHHHHHHHHhccCCCCCCceeEEEeeccccCCCC-c-----
Q 039671 20 SWAALNWVASHAGGNGPEPWLNDHADFGRVFIGGGSAGGNIAHTLAFQVGSIGLPRVKLVGVIMVHPFFGGTS-P----- 93 (195)
Q Consensus 20 ~~~a~~~l~~~~~~~~~~~~~~~~~d~~~i~l~G~S~Gg~la~~~a~~~~~~~~~~~~~~~~i~~~p~~~~~~-~----- 93 (195)
..++++||.+.+. +|.+||+++|.|+||++|+.+|....+ ++++++..+|+++..- .
T Consensus 245 ~~aVLd~L~~~p~-----------VD~~RV~~~G~SfGGy~AvRlA~le~~------RlkavV~~Ga~vh~~ft~~~~~~ 307 (411)
T PF06500_consen 245 HQAVLDYLASRPW-----------VDHTRVGAWGFSFGGYYAVRLAALEDP------RLKAVVALGAPVHHFFTDPEWQQ 307 (411)
T ss_dssp HHHHHHHHHHSTT-----------EEEEEEEEEEETHHHHHHHHHHHHTTT------T-SEEEEES---SCGGH-HHHHT
T ss_pred HHHHHHHHhcCCc-----------cChhheEEEEeccchHHHHHHHHhccc------ceeeEeeeCchHhhhhccHHHHh
Confidence 4577889988754 899999999999999999999876533 8999999999764321 1
Q ss_pred -cHHHH---HHhhCCCCCCC------CCCCCCC-Chhhh--cccCCCCEEEEEcCCccchhhHHHHHHHHHhcCCCccEE
Q 039671 94 -EEDEM---WLYMCPTNGGL------QDPRLKP-PAEDL--ARLGCERVLIFVAEKDFLKPVAMNYYEDLKKSGWKGTVE 160 (195)
Q Consensus 94 -~~~~~---~~~~~~~~~~~------~~~~~~p-~~~~~--~~~~~pp~~i~~g~~D~l~~~~~~~~~~l~~~~~g~~~~ 160 (195)
....+ +..-.+..... +....|- ....+ ....+ |++.+++++|++.+.... +.+... +.+-+
T Consensus 308 ~~P~my~d~LA~rlG~~~~~~~~l~~el~~~SLk~qGlL~~rr~~~-plL~i~~~~D~v~P~eD~--~lia~~--s~~gk 382 (411)
T PF06500_consen 308 RVPDMYLDVLASRLGMAAVSDESLRGELNKFSLKTQGLLSGRRCPT-PLLAINGEDDPVSPIEDS--RLIAES--STDGK 382 (411)
T ss_dssp TS-HHHHHHHHHHCT-SCE-HHHHHHHGGGGSTTTTTTTTSS-BSS--EEEEEETT-SSS-HHHH--HHHHHT--BTT-E
T ss_pred cCCHHHHHHHHHHhCCccCCHHHHHHHHHhcCcchhccccCCCCCc-ceEEeecCCCCCCCHHHH--HHHHhc--CCCCc
Confidence 01111 11111111000 0001111 11111 11222 699999999998875443 233333 33345
Q ss_pred EEEecC-CCccccccCCCchHHHHHHHHHHHHHHh
Q 039671 161 LVETHG-EGHSFYFDNLKCEKAVELINKFVSFITQ 194 (195)
Q Consensus 161 ~~~~~g-~~H~f~~~~~~~~~~~~~~~~~~~fl~~ 194 (195)
...++. .-| ....+.+..+.+||++
T Consensus 383 ~~~~~~~~~~---------~gy~~al~~~~~Wl~~ 408 (411)
T PF06500_consen 383 ALRIPSKPLH---------MGYPQALDEIYKWLED 408 (411)
T ss_dssp EEEE-SSSHH---------HHHHHHHHHHHHHHHH
T ss_pred eeecCCCccc---------cchHHHHHHHHHHHHH
Confidence 555554 336 3346888999999975
No 82
>PF06821 Ser_hydrolase: Serine hydrolase; InterPro: IPR010662 This family contains a number of hypothetical bacterial proteins of unknown function, which may be cytosolic. The Crystal Structure Of The Yden Gene Product Swiss:P96671 from B. Subtilis has been solved. The structure shows an alpha-beta hydrolase fold suggesting an enzymatic function for these proteins [].; GO: 0016787 hydrolase activity; PDB: 3BDV_B 2QS9_A 1UXO_A.
Probab=98.87 E-value=8.3e-08 Score=68.90 Aligned_cols=102 Identities=22% Similarity=0.255 Sum_probs=60.6
Q ss_pred CCceEEeeccchHHHHHHHHHHhccCCCCCCceeEEEeeccccCCCCccHHHHHHhhCCCCCCCCCCCCCCChhhhcccC
Q 039671 46 FGRVFIGGGSAGGNIAHTLAFQVGSIGLPRVKLVGVIMVHPFFGGTSPEEDEMWLYMCPTNGGLQDPRLKPPAEDLARLG 125 (195)
Q Consensus 46 ~~~i~l~G~S~Gg~la~~~a~~~~~~~~~~~~~~~~i~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~ 125 (195)
.+.++|+|||.|+..++.++.... ..+++|+++++|+...... .. ........+.... .+.
T Consensus 54 ~~~~ilVaHSLGc~~~l~~l~~~~-----~~~v~g~lLVAp~~~~~~~----------~~--~~~~~~f~~~p~~--~l~ 114 (171)
T PF06821_consen 54 DEPTILVAHSLGCLTALRWLAEQS-----QKKVAGALLVAPFDPDDPE----------PF--PPELDGFTPLPRD--PLP 114 (171)
T ss_dssp TTTEEEEEETHHHHHHHHHHHHTC-----CSSEEEEEEES--SCGCHH----------CC--TCGGCCCTTSHCC--HHH
T ss_pred CCCeEEEEeCHHHHHHHHHHhhcc-----cccccEEEEEcCCCccccc----------ch--hhhccccccCccc--ccC
Confidence 356999999999999997774221 2389999999999542000 00 0011111221111 122
Q ss_pred CCCEEEEEcCCccchh--hHHHHHHHHHhcCCCccEEEEEecCCCccccccC
Q 039671 126 CERVLIFVAEKDFLKP--VAMNYYEDLKKSGWKGTVELVETHGEGHSFYFDN 175 (195)
Q Consensus 126 ~pp~~i~~g~~D~l~~--~~~~~~~~l~~~~~g~~~~~~~~~g~~H~f~~~~ 175 (195)
+ |.+++.+++|+.++ .+.++++++ ..+++.+++++| |...+
T Consensus 115 ~-~~~viaS~nDp~vp~~~a~~~A~~l-------~a~~~~~~~~GH-f~~~~ 157 (171)
T PF06821_consen 115 F-PSIVIASDNDPYVPFERAQRLAQRL-------GAELIILGGGGH-FNAAS 157 (171)
T ss_dssp C-CEEEEEETTBSSS-HHHHHHHHHHH-------T-EEEEETS-TT-SSGGG
T ss_pred C-CeEEEEcCCCCccCHHHHHHHHHHc-------CCCeEECCCCCC-ccccc
Confidence 3 47999999999885 466666666 337899999999 65443
No 83
>COG4099 Predicted peptidase [General function prediction only]
Probab=98.87 E-value=3.4e-09 Score=80.43 Aligned_cols=110 Identities=15% Similarity=0.107 Sum_probs=78.5
Q ss_pred HHHHHHH-HhccCCCCCCCCCCCCCCCceEEeeccchHHHHHHHHHHhccCCCCCCceeEEEeeccccCCCCccHHHHHH
Q 039671 22 AALNWVA-SHAGGNGPEPWLNDHADFGRVFIGGGSAGGNIAHTLAFQVGSIGLPRVKLVGVIMVHPFFGGTSPEEDEMWL 100 (195)
Q Consensus 22 ~a~~~l~-~~~~~~~~~~~~~~~~d~~~i~l~G~S~Gg~la~~~a~~~~~~~~~~~~~~~~i~~~p~~~~~~~~~~~~~~ 100 (195)
..++-+. .-++.++ +|.+||.++|.|+||+.+.+++.+.++ -+++.++++|--+-..
T Consensus 251 ~~idli~~vlas~yn--------ID~sRIYviGlSrG~~gt~al~~kfPd------fFAaa~~iaG~~d~v~-------- 308 (387)
T COG4099 251 EKIDLILEVLASTYN--------IDRSRIYVIGLSRGGFGTWALAEKFPD------FFAAAVPIAGGGDRVY-------- 308 (387)
T ss_pred HHHHHHHHHHhhccC--------cccceEEEEeecCcchhhHHHHHhCch------hhheeeeecCCCchhh--------
Confidence 3444444 3345566 999999999999999999999999865 7889998887543200
Q ss_pred hhCCCCCCCCCCCCCCChhhhcccCCCCEEEEEcCCccch--hhHHHHHHHHHhcCCCccEEEEEec---CCCcccccc
Q 039671 101 YMCPTNGGLQDPRLKPPAEDLARLGCERVLIFVAEKDFLK--PVAMNYYEDLKKSGWKGTVELVETH---GEGHSFYFD 174 (195)
Q Consensus 101 ~~~~~~~~~~~~~~~p~~~~~~~~~~pp~~i~~g~~D~l~--~~~~~~~~~l~~~~~g~~~~~~~~~---g~~H~f~~~ 174 (195)
..+.++.. |++++|+++|.++ ++++-.+++|+.. +.++++..|. -..|+.+..
T Consensus 309 ----------------lv~~lk~~---piWvfhs~dDkv~Pv~nSrv~y~~lk~~--~~kv~Ytaf~~g~~~~eG~d~~ 366 (387)
T COG4099 309 ----------------LVRTLKKA---PIWVFHSSDDKVIPVSNSRVLYERLKAL--DRKVNYTAFLEGTTVLEGVDHS 366 (387)
T ss_pred ----------------hhhhhccC---ceEEEEecCCCccccCcceeehHHHHhh--ccccchhhhhhccccccccCCC
Confidence 11234443 8999999999766 4688888999988 6677776665 234554433
No 84
>PF00756 Esterase: Putative esterase; InterPro: IPR000801 This family contains several seemingly unrelated proteins, including human esterase D; mycobacterial antigen 85, which is responsible for the high affinity of mycobacteria to fibronectin; Corynebacterium glutamicum major secreted protein PS1; and hypothetical proteins from Escherichia coli, yeast, mycobacteria and Haemophilus influenzae.; PDB: 3LS2_A 1VA5_B 1DQZ_B 3HRH_A 1DQY_A 2GZR_A 2GZS_A 3GFF_A 1R88_A 3E4D_D ....
Probab=98.87 E-value=1.5e-09 Score=82.56 Aligned_cols=125 Identities=18% Similarity=0.135 Sum_probs=80.3
Q ss_pred HHHHHHHHhccCCCCCCCCCCCCCCCceEEeeccchHHHHHHHHHHhccCCCCCCceeEEEeeccccCCCCccHHHHHHh
Q 039671 22 AALNWVASHAGGNGPEPWLNDHADFGRVFIGGGSAGGNIAHTLAFQVGSIGLPRVKLVGVIMVHPFFGGTSPEEDEMWLY 101 (195)
Q Consensus 22 ~a~~~l~~~~~~~~~~~~~~~~~d~~~i~l~G~S~Gg~la~~~a~~~~~~~~~~~~~~~~i~~~p~~~~~~~~~~~~~~~ 101 (195)
+.+.++.++.. +++++.+|+|+|+||..|+.++.++++ .+.+++++||.++.... +|..
T Consensus 101 el~p~i~~~~~-----------~~~~~~~i~G~S~GG~~Al~~~l~~Pd------~F~~~~~~S~~~~~~~~----~w~~ 159 (251)
T PF00756_consen 101 ELIPYIEANYR-----------TDPDRRAIAGHSMGGYGALYLALRHPD------LFGAVIAFSGALDPSPS----LWGP 159 (251)
T ss_dssp HHHHHHHHHSS-----------EEECCEEEEEETHHHHHHHHHHHHSTT------TESEEEEESEESETTHC----HHHH
T ss_pred cchhHHHHhcc-----------cccceeEEeccCCCcHHHHHHHHhCcc------ccccccccCcccccccc----ccCc
Confidence 55677777754 555569999999999999999999865 89999999999887522 1211
Q ss_pred hCCCCCCCCCCCCCC--Chhh-hcccCCCCEEEEEcCCccch------------hhHHHHHHHHHhcCCCccEEEEEecC
Q 039671 102 MCPTNGGLQDPRLKP--PAED-LARLGCERVLIFVAEKDFLK------------PVAMNYYEDLKKSGWKGTVELVETHG 166 (195)
Q Consensus 102 ~~~~~~~~~~~~~~p--~~~~-~~~~~~pp~~i~~g~~D~l~------------~~~~~~~~~l~~~~~g~~~~~~~~~g 166 (195)
. . ........+ .... .......++++..|+.|... .....+.+.|+.. |.+..+++++|
T Consensus 160 ~--~--~~~~~~~~~~~~~~~~~~~~~~~~i~l~~G~~d~~~~~~~~~~~~~~~~~~~~~~~~l~~~--g~~~~~~~~~G 233 (251)
T PF00756_consen 160 S--D--DEAWKENDPFDLIKALSQKKKPLRIYLDVGTKDEFGGWEDSAQILQFLANNRELAQLLKAK--GIPHTYHVFPG 233 (251)
T ss_dssp S--T--CGHHGGCHHHHHHHHHHHTTSEEEEEEEEETTSTTHHCSHHHHHHHHHHHHHHHHHHCCCE--ECTTESEEEHS
T ss_pred C--C--cHHhhhccHHHHhhhhhcccCCCeEEEEeCCCCcccccccCHHHHHHHHHhHhhHHHHHHc--CCCceEEEecC
Confidence 0 0 000000111 0000 00111126899999998722 2355666667777 78889999996
Q ss_pred CCcccccc
Q 039671 167 EGHSFYFD 174 (195)
Q Consensus 167 ~~H~f~~~ 174 (195)
+|.+..+
T Consensus 234 -~H~~~~W 240 (251)
T PF00756_consen 234 -GHDWAYW 240 (251)
T ss_dssp -ESSHHHH
T ss_pred -ccchhhH
Confidence 8977544
No 85
>KOG3101 consensus Esterase D [General function prediction only]
Probab=98.85 E-value=3.7e-09 Score=76.55 Aligned_cols=128 Identities=21% Similarity=0.134 Sum_probs=85.6
Q ss_pred CCCCceEEeeccchHHHHHHHHHHhccCCCCCCceeEEEeeccccCCCCc-cHHHHHHhhCCCC-CCCCCCCCCCChhhh
Q 039671 44 ADFGRVFIGGGSAGGNIAHTLAFQVGSIGLPRVKLVGVIMVHPFFGGTSP-EEDEMWLYMCPTN-GGLQDPRLKPPAEDL 121 (195)
Q Consensus 44 ~d~~~i~l~G~S~Gg~la~~~a~~~~~~~~~~~~~~~~i~~~p~~~~~~~-~~~~~~~~~~~~~-~~~~~~~~~p~~~~~ 121 (195)
+|+.++.|.||||||+-|+..+++..+ +.+.+-.+.|++++... |-...+..+++.. ...+........+.+
T Consensus 138 ld~~k~~IfGHSMGGhGAl~~~Lkn~~------kykSvSAFAPI~NP~~cpWGqKAf~gYLG~~ka~W~~yDat~lik~y 211 (283)
T KOG3101|consen 138 LDPLKVGIFGHSMGGHGALTIYLKNPS------KYKSVSAFAPICNPINCPWGQKAFTGYLGDNKAQWEAYDATHLIKNY 211 (283)
T ss_pred ccchhcceeccccCCCceEEEEEcCcc------cccceeccccccCcccCcchHHHhhcccCCChHHHhhcchHHHHHhc
Confidence 899999999999999999888887754 78899999999988653 4444444444431 111111111133444
Q ss_pred cccCCCCEEEEEcCCccchh-h--HHHHHHHHHhcCCCccEEEEEecCCCccccccCCCch
Q 039671 122 ARLGCERVLIFVAEKDFLKP-V--AMNYYEDLKKSGWKGTVELVETHGEGHSFYFDNLKCE 179 (195)
Q Consensus 122 ~~~~~pp~~i~~g~~D~l~~-~--~~~~~~~l~~~~~g~~~~~~~~~g~~H~f~~~~~~~~ 179 (195)
..... -+||-.|..|.+.. + -+.|.++.+... ..++.+...+|-+|.+.+.....+
T Consensus 212 ~~~~~-~ilIdqG~~D~Fl~~qLlPe~l~~a~~~~~-~~~v~~r~~~gyDHSYyfIaTFv~ 270 (283)
T KOG3101|consen 212 RGVGD-DILIDQGAADNFLAEQLLPENLLEACKATW-QAPVVFRLQEGYDHSYYFIATFVA 270 (283)
T ss_pred CCCCc-cEEEecCccchhhhhhcChHHHHHHhhccc-cccEEEEeecCCCcceeeehhhhH
Confidence 44322 38999999998765 2 445555554331 468899999999998887765544
No 86
>KOG4391 consensus Predicted alpha/beta hydrolase BEM46 [General function prediction only]
Probab=98.85 E-value=5.2e-09 Score=76.16 Aligned_cols=129 Identities=22% Similarity=0.230 Sum_probs=85.2
Q ss_pred CchHHHHHHHHHHHHHhccCCCCCCCCCCCCCCCceEEeeccchHHHHHHHHHHhccCCCCCCceeEEEeeccccCCCCc
Q 039671 14 PACYEDSWAALNWVASHAGGNGPEPWLNDHADFGRVFIGGGSAGGNIAHTLAFQVGSIGLPRVKLVGVIMVHPFFGGTSP 93 (195)
Q Consensus 14 p~~~~D~~~a~~~l~~~~~~~~~~~~~~~~~d~~~i~l~G~S~Gg~la~~~a~~~~~~~~~~~~~~~~i~~~p~~~~~~~ 93 (195)
....-|..++++|+..+.. .|..++++.|.|.||..|+.+|.+..+ ++.|+|+-.-.+.....
T Consensus 127 ~GL~lDs~avldyl~t~~~-----------~dktkivlfGrSlGGAvai~lask~~~------ri~~~ivENTF~SIp~~ 189 (300)
T KOG4391|consen 127 EGLKLDSEAVLDYLMTRPD-----------LDKTKIVLFGRSLGGAVAIHLASKNSD------RISAIIVENTFLSIPHM 189 (300)
T ss_pred cceeccHHHHHHHHhcCcc-----------CCcceEEEEecccCCeeEEEeeccchh------heeeeeeechhccchhh
Confidence 3456899999999998865 789999999999999999999988765 88999987766655222
Q ss_pred c-------HHHHHHhhCCCCCCCCCCCCCCChhhhcccCCCCEEEEEcCCccchhhHHHHHHHHHhcCCCccEEEEEecC
Q 039671 94 E-------EDEMWLYMCPTNGGLQDPRLKPPAEDLARLGCERVLIFVAEKDFLKPVAMNYYEDLKKSGWKGTVELVETHG 166 (195)
Q Consensus 94 ~-------~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~pp~~i~~g~~D~l~~~~~~~~~~l~~~~~g~~~~~~~~~g 166 (195)
. .......++-.. ... +...+....+ |.+++.|..|.+++..+. ++|-..++....++..||+
T Consensus 190 ~i~~v~p~~~k~i~~lc~kn-----~~~--S~~ki~~~~~-P~LFiSGlkDelVPP~~M--r~Ly~~c~S~~Krl~eFP~ 259 (300)
T KOG4391|consen 190 AIPLVFPFPMKYIPLLCYKN-----KWL--SYRKIGQCRM-PFLFISGLKDELVPPVMM--RQLYELCPSRTKRLAEFPD 259 (300)
T ss_pred hhheeccchhhHHHHHHHHh-----hhc--chhhhccccC-ceEEeecCccccCCcHHH--HHHHHhCchhhhhheeCCC
Confidence 1 111111111000 000 1112222223 699999999999976433 3333333234678999999
Q ss_pred CCc
Q 039671 167 EGH 169 (195)
Q Consensus 167 ~~H 169 (195)
+.|
T Consensus 260 gtH 262 (300)
T KOG4391|consen 260 GTH 262 (300)
T ss_pred Ccc
Confidence 999
No 87
>PRK00175 metX homoserine O-acetyltransferase; Provisional
Probab=98.85 E-value=1.7e-07 Score=75.66 Aligned_cols=65 Identities=17% Similarity=0.235 Sum_probs=47.1
Q ss_pred ccCCCCEEEEEcCCccch--hhHHHHHHHHHhcCCCccEEEEEec-CCCccccccCCCchHHHHHHHHHHHHHHhC
Q 039671 123 RLGCERVLIFVAEKDFLK--PVAMNYYEDLKKSGWKGTVELVETH-GEGHSFYFDNLKCEKAVELINKFVSFITQL 195 (195)
Q Consensus 123 ~~~~pp~~i~~g~~D~l~--~~~~~~~~~l~~~~~g~~~~~~~~~-g~~H~f~~~~~~~~~~~~~~~~~~~fl~~~ 195 (195)
.+.+ |+++++|++|.++ +.+..+++.+.+. +..+++.+++ +.+|.... ++.+++.+.+.+||+++
T Consensus 307 ~I~~-PtLvI~G~~D~~~p~~~~~~la~~i~~a--~~~~~l~~i~~~~GH~~~l-----e~p~~~~~~L~~FL~~~ 374 (379)
T PRK00175 307 RIKA-RFLVVSFTSDWLFPPARSREIVDALLAA--GADVSYAEIDSPYGHDAFL-----LDDPRYGRLVRAFLERA 374 (379)
T ss_pred cCCC-CEEEEEECCccccCHHHHHHHHHHHHhc--CCCeEEEEeCCCCCchhHh-----cCHHHHHHHHHHHHHhh
Confidence 3443 5999999999876 3477788888877 5677888775 89995433 23356777888888763
No 88
>COG1770 PtrB Protease II [Amino acid transport and metabolism]
Probab=98.85 E-value=3.7e-08 Score=82.04 Aligned_cols=137 Identities=18% Similarity=0.186 Sum_probs=92.8
Q ss_pred chHHHHHHHHHHHHHhccCCCCCCCCCCCCCCCceEEeeccchHHHHHHHHHHhccCCCCCCceeEEEeeccccCCCCcc
Q 039671 15 ACYEDSWAALNWVASHAGGNGPEPWLNDHADFGRVFIGGGSAGGNIAHTLAFQVGSIGLPRVKLVGVIMVHPFFGGTSPE 94 (195)
Q Consensus 15 ~~~~D~~~a~~~l~~~~~~~~~~~~~~~~~d~~~i~l~G~S~Gg~la~~~a~~~~~~~~~~~~~~~~i~~~p~~~~~~~~ 94 (195)
..+.|..++.++|.++.. .++++|+++|.||||+|+.+++-..++ .++++|+..|+.|.-..+
T Consensus 506 NTf~DFIa~a~~Lv~~g~-----------~~~~~i~a~GGSAGGmLmGav~N~~P~------lf~~iiA~VPFVDvltTM 568 (682)
T COG1770 506 NTFTDFIAAARHLVKEGY-----------TSPDRIVAIGGSAGGMLMGAVANMAPD------LFAGIIAQVPFVDVLTTM 568 (682)
T ss_pred ccHHHHHHHHHHHHHcCc-----------CCccceEEeccCchhHHHHHHHhhChh------hhhheeecCCccchhhhh
Confidence 457899999999999854 788999999999999999888877655 899999999998864432
Q ss_pred HH-------HHHHhhCCCCCCCC----CCCCCCChhhhcccCCCCEEEEEcCCccchh--hHHHHHHHHHhcCC-CccEE
Q 039671 95 ED-------EMWLYMCPTNGGLQ----DPRLKPPAEDLARLGCERVLIFVAEKDFLKP--VAMNYYEDLKKSGW-KGTVE 160 (195)
Q Consensus 95 ~~-------~~~~~~~~~~~~~~----~~~~~p~~~~~~~~~~pp~~i~~g~~D~l~~--~~~~~~~~l~~~~~-g~~~~ 160 (195)
.+ .-|... ++....+ ....|| .+++...+.|++++..|-.|+.|. +..++.++|+..+- +.++-
T Consensus 569 lD~slPLT~~E~~EW-GNP~d~e~y~yikSYSP-YdNV~a~~YP~ilv~~Gl~D~rV~YwEpAKWvAkLR~~~td~~plL 646 (682)
T COG1770 569 LDPSLPLTVTEWDEW-GNPLDPEYYDYIKSYSP-YDNVEAQPYPAILVTTGLNDPRVQYWEPAKWVAKLRELKTDGNPLL 646 (682)
T ss_pred cCCCCCCCccchhhh-CCcCCHHHHHHHhhcCc-hhccccCCCCceEEEccccCCccccchHHHHHHHHhhcccCCCcEE
Confidence 10 000000 0000000 012333 234444568999999999998874 47889999987721 22455
Q ss_pred EEEecCCCcc
Q 039671 161 LVETHGEGHS 170 (195)
Q Consensus 161 ~~~~~g~~H~ 170 (195)
++.--.+||+
T Consensus 647 lkt~M~aGHg 656 (682)
T COG1770 647 LKTNMDAGHG 656 (682)
T ss_pred EEecccccCC
Confidence 6664566883
No 89
>PLN03087 BODYGUARD 1 domain containing hydrolase; Provisional
Probab=98.84 E-value=1.6e-07 Score=77.70 Aligned_cols=39 Identities=18% Similarity=0.193 Sum_probs=33.0
Q ss_pred CCCCceEEeeccchHHHHHHHHHHhccCCCCCCceeEEEeecccc
Q 039671 44 ADFGRVFIGGGSAGGNIAHTLAFQVGSIGLPRVKLVGVIMVHPFF 88 (195)
Q Consensus 44 ~d~~~i~l~G~S~Gg~la~~~a~~~~~~~~~~~~~~~~i~~~p~~ 88 (195)
.+.+++.++|||+||.+|+.++.++++ +++++++++|..
T Consensus 271 lg~~k~~LVGhSmGG~iAl~~A~~~Pe------~V~~LVLi~~~~ 309 (481)
T PLN03087 271 YKVKSFHIVAHSLGCILALALAVKHPG------AVKSLTLLAPPY 309 (481)
T ss_pred cCCCCEEEEEECHHHHHHHHHHHhChH------hccEEEEECCCc
Confidence 345689999999999999999998764 789999998654
No 90
>COG3208 GrsT Predicted thioesterase involved in non-ribosomal peptide biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=98.83 E-value=7.7e-08 Score=71.49 Aligned_cols=149 Identities=21% Similarity=0.255 Sum_probs=82.4
Q ss_pred hHHHHHHHHHHHHHhccCCCCCCCCCCCCCCCceEEeeccchHHHHHHHHHHhccCCCCCCceeEEEeec---cccCCCC
Q 039671 16 CYEDSWAALNWVASHAGGNGPEPWLNDHADFGRVFIGGGSAGGNIAHTLAFQVGSIGLPRVKLVGVIMVH---PFFGGTS 92 (195)
Q Consensus 16 ~~~D~~~a~~~l~~~~~~~~~~~~~~~~~d~~~i~l~G~S~Gg~la~~~a~~~~~~~~~~~~~~~~i~~~---p~~~~~~ 92 (195)
.+.|+.+..+-|...... . .--+..++.||||||.+|-.+|.+....+.+ +++++..+ |..+...
T Consensus 52 ~~~di~~Lad~la~el~~-~--------~~d~P~alfGHSmGa~lAfEvArrl~~~g~~---p~~lfisg~~aP~~~~~~ 119 (244)
T COG3208 52 LLTDIESLADELANELLP-P--------LLDAPFALFGHSMGAMLAFEVARRLERAGLP---PRALFISGCRAPHYDRGK 119 (244)
T ss_pred ccccHHHHHHHHHHHhcc-c--------cCCCCeeecccchhHHHHHHHHHHHHHcCCC---cceEEEecCCCCCCcccC
Confidence 456666666666665431 1 2235799999999999999999999887765 45554433 3222211
Q ss_pred cc------------------------HHHHHHhhCCCCC----CCCCCCCCCChhhhcccCCCCEEEEEcCCccchhh--
Q 039671 93 PE------------------------EDEMWLYMCPTNG----GLQDPRLKPPAEDLARLGCERVLIFVAEKDFLKPV-- 142 (195)
Q Consensus 93 ~~------------------------~~~~~~~~~~~~~----~~~~~~~~p~~~~~~~~~~pp~~i~~g~~D~l~~~-- 142 (195)
.. ..++...+.|.-. ..+.....+ ...+++ |+.++.|++|..+..
T Consensus 120 ~i~~~~D~~~l~~l~~lgG~p~e~led~El~~l~LPilRAD~~~~e~Y~~~~----~~pl~~-pi~~~~G~~D~~vs~~~ 194 (244)
T COG3208 120 QIHHLDDADFLADLVDLGGTPPELLEDPELMALFLPILRADFRALESYRYPP----PAPLAC-PIHAFGGEKDHEVSRDE 194 (244)
T ss_pred CccCCCHHHHHHHHHHhCCCChHHhcCHHHHHHHHHHHHHHHHHhcccccCC----CCCcCc-ceEEeccCcchhccHHH
Confidence 11 1122222222200 001111111 011233 599999999988743
Q ss_pred HHHHHHHHHhcCCCccEEEEEecCCCccccccCCCchHHHHHHHHHHHHH
Q 039671 143 AMNYYEDLKKSGWKGTVELVETHGEGHSFYFDNLKCEKAVELINKFVSFI 192 (195)
Q Consensus 143 ~~~~~~~l~~~~~g~~~~~~~~~g~~H~f~~~~~~~~~~~~~~~~~~~fl 192 (195)
...+.+. . +...++++++| +|.|... ...+++..+.+.+
T Consensus 195 ~~~W~~~---t--~~~f~l~~fdG-gHFfl~~-----~~~~v~~~i~~~l 233 (244)
T COG3208 195 LGAWREH---T--KGDFTLRVFDG-GHFFLNQ-----QREEVLARLEQHL 233 (244)
T ss_pred HHHHHHh---h--cCCceEEEecC-cceehhh-----hHHHHHHHHHHHh
Confidence 3333333 3 56789999999 8955432 2244555555444
No 91
>TIGR01392 homoserO_Ac_trn homoserine O-acetyltransferase. This family describes homoserine-O-acetyltransferase, an enzyme of methionine biosynthesis. This model has been rebuilt to identify sequences more broadly, including a number of sequences suggested to be homoserine O-acetyltransferase based on proximity to other Met biosynthesis genes.
Probab=98.82 E-value=3.7e-07 Score=72.98 Aligned_cols=56 Identities=18% Similarity=0.227 Sum_probs=42.4
Q ss_pred chHHHHHHHHHHHHHhccCCCCCCCCCCCCCCCc-eEEeeccchHHHHHHHHHHhccCCCCCCceeEEEeeccccC
Q 039671 15 ACYEDSWAALNWVASHAGGNGPEPWLNDHADFGR-VFIGGGSAGGNIAHTLAFQVGSIGLPRVKLVGVIMVHPFFG 89 (195)
Q Consensus 15 ~~~~D~~~a~~~l~~~~~~~~~~~~~~~~~d~~~-i~l~G~S~Gg~la~~~a~~~~~~~~~~~~~~~~i~~~p~~~ 89 (195)
-.++|..+.+.-+.+. ...++ +.|+|||+||.+|+.++.+.++ +++++|++++...
T Consensus 107 ~~~~~~~~~~~~~~~~-------------l~~~~~~~l~G~S~Gg~ia~~~a~~~p~------~v~~lvl~~~~~~ 163 (351)
T TIGR01392 107 ITIRDDVKAQKLLLDH-------------LGIEQIAAVVGGSMGGMQALEWAIDYPE------RVRAIVVLATSAR 163 (351)
T ss_pred CcHHHHHHHHHHHHHH-------------cCCCCceEEEEECHHHHHHHHHHHHChH------hhheEEEEccCCc
Confidence 3466766666666555 33467 9999999999999999988754 7899998887543
No 92
>PRK04940 hypothetical protein; Provisional
Probab=98.82 E-value=2.4e-07 Score=66.37 Aligned_cols=118 Identities=16% Similarity=0.167 Sum_probs=74.0
Q ss_pred CceEEeeccchHHHHHHHHHHhccCCCCCCceeEEEeeccccCCCCccHHHHHHhhCCCCCCCCCCCCCC-ChhhhcccC
Q 039671 47 GRVFIGGGSAGGNIAHTLAFQVGSIGLPRVKLVGVIMVHPFFGGTSPEEDEMWLYMCPTNGGLQDPRLKP-PAEDLARLG 125 (195)
Q Consensus 47 ~~i~l~G~S~Gg~la~~~a~~~~~~~~~~~~~~~~i~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-~~~~~~~~~ 125 (195)
+++.|+|.|+||+.|.+++.+. .++ .|++.|.+.+.... ..+.+.... ...+.+ ..+.++..+
T Consensus 60 ~~~~liGSSLGGyyA~~La~~~--------g~~-aVLiNPAv~P~~~L-----~~~ig~~~~--y~~~~~~h~~eL~~~~ 123 (180)
T PRK04940 60 ERPLICGVGLGGYWAERIGFLC--------GIR-QVIFNPNLFPEENM-----EGKIDRPEE--YADIATKCVTNFREKN 123 (180)
T ss_pred CCcEEEEeChHHHHHHHHHHHH--------CCC-EEEECCCCChHHHH-----HHHhCCCcc--hhhhhHHHHHHhhhcC
Confidence 4699999999999999999997 344 47888888874321 112121111 112222 222333222
Q ss_pred CCCEEEEEcCCccchhhHHHHHHHHHhcCCCccEEEEEecCCCccccccCCCchHHHHHHHHHHHHHH
Q 039671 126 CERVLIFVAEKDFLKPVAMNYYEDLKKSGWKGTVELVETHGEGHSFYFDNLKCEKAVELINKFVSFIT 193 (195)
Q Consensus 126 ~pp~~i~~g~~D~l~~~~~~~~~~l~~~~~g~~~~~~~~~g~~H~f~~~~~~~~~~~~~~~~~~~fl~ 193 (195)
--..+++..+.|.+.+.-+.. +++.. -.+..+.+|++|.|..+ ++.+..|++|++
T Consensus 124 p~r~~vllq~gDEvLDyr~a~-~~y~~-----~y~~~v~~GGdH~f~~f-------e~~l~~I~~F~~ 178 (180)
T PRK04940 124 RDRCLVILSRNDEVLDSQRTA-EELHP-----YYEIVWDEEQTHKFKNI-------SPHLQRIKAFKT 178 (180)
T ss_pred cccEEEEEeCCCcccCHHHHH-HHhcc-----CceEEEECCCCCCCCCH-------HHHHHHHHHHHh
Confidence 124689999999888754332 22222 23688999999988554 577788888875
No 93
>PF00561 Abhydrolase_1: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases.; InterPro: IPR000073 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents fold-1 of alpha/beta hydrolase.; PDB: 2VAT_E 2VAX_C 2VAV_H 2PSJ_A 2PSH_B 2PSE_A 2PSF_A 2PSD_A 2EDA_A 1CIJ_A ....
Probab=98.81 E-value=9.4e-08 Score=70.92 Aligned_cols=54 Identities=20% Similarity=0.245 Sum_probs=46.1
Q ss_pred chHHHHHHHHHHHHHhccCCCCCCCCCCCCCCCceEEeeccchHHHHHHHHHHhccCCCCCCceeEEEeeccc
Q 039671 15 ACYEDSWAALNWVASHAGGNGPEPWLNDHADFGRVFIGGGSAGGNIAHTLAFQVGSIGLPRVKLVGVIMVHPF 87 (195)
Q Consensus 15 ~~~~D~~~a~~~l~~~~~~~~~~~~~~~~~d~~~i~l~G~S~Gg~la~~~a~~~~~~~~~~~~~~~~i~~~p~ 87 (195)
-..+|..+.++.+.+. ...+++.++|||+||.+++.++...++ +++++++.+++
T Consensus 25 ~~~~~~~~~~~~~~~~-------------l~~~~~~~vG~S~Gg~~~~~~a~~~p~------~v~~lvl~~~~ 78 (230)
T PF00561_consen 25 YTTDDLAADLEALREA-------------LGIKKINLVGHSMGGMLALEYAAQYPE------RVKKLVLISPP 78 (230)
T ss_dssp HCHHHHHHHHHHHHHH-------------HTTSSEEEEEETHHHHHHHHHHHHSGG------GEEEEEEESES
T ss_pred ccHHHHHHHHHHHHHH-------------hCCCCeEEEEECCChHHHHHHHHHCch------hhcCcEEEeee
Confidence 3568888888888887 345569999999999999999999876 89999999985
No 94
>PF00135 COesterase: Carboxylesterase family The prints entry is specific to acetylcholinesterase; InterPro: IPR002018 Higher eukaryotes have many distinct esterases. Among the different types are those which act on carboxylic esters (3.1.1 from EC). Carboxyl-esterases have been classified into three categories (A, B and C) on the basis of differential patterns of inhibition by organophosphates. The sequence of a number of type-B carboxylesterases indicates [, , ] that the majority are evolutionary related. As is the case for lipases and serine proteases, the catalytic apparatus of esterases involves three residues (catalytic triad): a serine, a glutamate or aspartate and a histidine.; PDB: 3B3Q_A 1CLE_B 1GQS_A 2VJD_A 1HBJ_A 2C5G_A 1U65_A 2WG1_A 1FSS_A 3M3D_A ....
Probab=98.81 E-value=5e-09 Score=87.88 Aligned_cols=76 Identities=26% Similarity=0.272 Sum_probs=58.5
Q ss_pred CCCcCCC-------CCCCC---CCchHHHHHHHHHHHHHhccCCCCCCCCCCCCCCCceEEeeccchHHHHHHHHHHhcc
Q 039671 1 VSVEYGL-------FPDRP---IPACYEDSWAALNWVASHAGGNGPEPWLNDHADFGRVFIGGGSAGGNIAHTLAFQVGS 70 (195)
Q Consensus 1 ~~~~Yrl-------ap~~~---~p~~~~D~~~a~~~l~~~~~~~~~~~~~~~~~d~~~i~l~G~S~Gg~la~~~a~~~~~ 70 (195)
|++|||| .++.. -.-.+.|...|++|++++...+| .|+++|.|+|+|+||..+..+......
T Consensus 160 Vt~nYRlg~~Gfl~~~~~~~~~gN~Gl~Dq~~AL~WV~~nI~~FG--------GDp~~VTl~G~SAGa~sv~~~l~sp~~ 231 (535)
T PF00135_consen 160 VTINYRLGAFGFLSLGDLDAPSGNYGLLDQRLALKWVQDNIAAFG--------GDPDNVTLFGQSAGAASVSLLLLSPSS 231 (535)
T ss_dssp EEE----HHHHH-BSSSTTSHBSTHHHHHHHHHHHHHHHHGGGGT--------EEEEEEEEEEETHHHHHHHHHHHGGGG
T ss_pred EEecccccccccccccccccCchhhhhhhhHHHHHHHHhhhhhcc--------cCCcceeeeeecccccccceeeecccc
Confidence 5789997 23333 56789999999999999999999 999999999999999999877777544
Q ss_pred CCCCCCceeEEEeecccc
Q 039671 71 IGLPRVKLVGVIMVHPFF 88 (195)
Q Consensus 71 ~~~~~~~~~~~i~~~p~~ 88 (195)
.+ .++++|+.||..
T Consensus 232 ~~----LF~raI~~SGs~ 245 (535)
T PF00135_consen 232 KG----LFHRAILQSGSA 245 (535)
T ss_dssp TT----SBSEEEEES--T
T ss_pred cc----cccccccccccc
Confidence 33 689999999843
No 95
>PLN02578 hydrolase
Probab=98.80 E-value=1.6e-07 Score=75.12 Aligned_cols=36 Identities=22% Similarity=0.231 Sum_probs=31.1
Q ss_pred CCceEEeeccchHHHHHHHHHHhccCCCCCCceeEEEeeccc
Q 039671 46 FGRVFIGGGSAGGNIAHTLAFQVGSIGLPRVKLVGVIMVHPF 87 (195)
Q Consensus 46 ~~~i~l~G~S~Gg~la~~~a~~~~~~~~~~~~~~~~i~~~p~ 87 (195)
.+++.++|||+||.+|+.++.+.++ ++++++++++.
T Consensus 151 ~~~~~lvG~S~Gg~ia~~~A~~~p~------~v~~lvLv~~~ 186 (354)
T PLN02578 151 KEPAVLVGNSLGGFTALSTAVGYPE------LVAGVALLNSA 186 (354)
T ss_pred cCCeEEEEECHHHHHHHHHHHhChH------hcceEEEECCC
Confidence 4679999999999999999998865 78999988754
No 96
>PRK08775 homoserine O-acetyltransferase; Provisional
Probab=98.79 E-value=1.9e-07 Score=74.44 Aligned_cols=57 Identities=16% Similarity=0.190 Sum_probs=39.6
Q ss_pred CEEEEEcCCccchh--hHHHHHHHHHhcCCCccEEEEEecC-CCccccccCCCchHHHHHHHHHHHHHHh
Q 039671 128 RVLIFVAEKDFLKP--VAMNYYEDLKKSGWKGTVELVETHG-EGHSFYFDNLKCEKAVELINKFVSFITQ 194 (195)
Q Consensus 128 p~~i~~g~~D~l~~--~~~~~~~~l~~~~~g~~~~~~~~~g-~~H~f~~~~~~~~~~~~~~~~~~~fl~~ 194 (195)
|+++++|++|.+++ ....+.+.+. ...+++++++ ++|.... ++.+++.+.+.+||++
T Consensus 279 PtLvi~G~~D~~~p~~~~~~~~~~i~-----p~a~l~~i~~~aGH~~~l-----E~Pe~~~~~l~~FL~~ 338 (343)
T PRK08775 279 PTVVVAVEGDRLVPLADLVELAEGLG-----PRGSLRVLRSPYGHDAFL-----KETDRIDAILTTALRS 338 (343)
T ss_pred CeEEEEeCCCEeeCHHHHHHHHHHcC-----CCCeEEEEeCCccHHHHh-----cCHHHHHHHHHHHHHh
Confidence 59999999998775 3444444441 2458999985 8995544 2345777788889875
No 97
>PLN02980 2-oxoglutarate decarboxylase/ hydro-lyase/ magnesium ion binding / thiamin pyrophosphate binding
Probab=98.78 E-value=2e-07 Score=87.37 Aligned_cols=154 Identities=25% Similarity=0.307 Sum_probs=88.6
Q ss_pred hHHHHHHHHHHHHHhccCCCCCCCCCCCCCCCceEEeeccchHHHHHHHHHHhccCCCCCCceeEEEeeccccCCCCcc-
Q 039671 16 CYEDSWAALNWVASHAGGNGPEPWLNDHADFGRVFIGGGSAGGNIAHTLAFQVGSIGLPRVKLVGVIMVHPFFGGTSPE- 94 (195)
Q Consensus 16 ~~~D~~~a~~~l~~~~~~~~~~~~~~~~~d~~~i~l~G~S~Gg~la~~~a~~~~~~~~~~~~~~~~i~~~p~~~~~~~~- 94 (195)
.++++.+.+.-+.++ ...+++.|+|||+||.+|+.++.+.++ ++++++++++........
T Consensus 1427 si~~~a~~l~~ll~~-------------l~~~~v~LvGhSmGG~iAl~~A~~~P~------~V~~lVlis~~p~~~~~~~ 1487 (1655)
T PLN02980 1427 SVELVADLLYKLIEH-------------ITPGKVTLVGYSMGARIALYMALRFSD------KIEGAVIISGSPGLKDEVA 1487 (1655)
T ss_pred CHHHHHHHHHHHHHH-------------hCCCCEEEEEECHHHHHHHHHHHhChH------hhCEEEEECCCCccCchHH
Confidence 356666555545444 345689999999999999999988754 789999887643221110
Q ss_pred -------------------HHHHHHhhCCCC---CCCCCC-----------------------CC----CC-Chhhhccc
Q 039671 95 -------------------EDEMWLYMCPTN---GGLQDP-----------------------RL----KP-PAEDLARL 124 (195)
Q Consensus 95 -------------------~~~~~~~~~~~~---~~~~~~-----------------------~~----~p-~~~~~~~~ 124 (195)
...+........ .....+ .. .+ ..+.+..+
T Consensus 1488 ~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~dl~~~L~~I 1567 (1655)
T PLN02980 1488 RKIRSAKDDSRARMLIDHGLEIFLENWYSGELWKSLRNHPHFNKIVASRLLHKDVPSLAKLLSDLSIGRQPSLWEDLKQC 1567 (1655)
T ss_pred HHHHhhhhhHHHHHHHhhhHHHHHHHhccHHHhhhhccCHHHHHHHHHHHhcCCHHHHHHHHHHhhhcccchHHHHHhhC
Confidence 000000000000 000000 00 00 11234444
Q ss_pred CCCCEEEEEcCCccchh-hHHHHHHHHHhcCC------CccEEEEEecCCCccccccCCCchHHHHHHHHHHHHHHh
Q 039671 125 GCERVLIFVAEKDFLKP-VAMNYYEDLKKSGW------KGTVELVETHGEGHSFYFDNLKCEKAVELINKFVSFITQ 194 (195)
Q Consensus 125 ~~pp~~i~~g~~D~l~~-~~~~~~~~l~~~~~------g~~~~~~~~~g~~H~f~~~~~~~~~~~~~~~~~~~fl~~ 194 (195)
+. |+++++|++|.+.. .+..+.+.+.+... ...++++++++++|.... +..+++.+.+.+||++
T Consensus 1568 ~~-PtLlI~Ge~D~~~~~~a~~~~~~i~~a~~~~~~~~~~~a~lvvI~~aGH~~~l-----E~Pe~f~~~I~~FL~~ 1638 (1655)
T PLN02980 1568 DT-PLLLVVGEKDVKFKQIAQKMYREIGKSKESGNDKGKEIIEIVEIPNCGHAVHL-----ENPLPVIRALRKFLTR 1638 (1655)
T ss_pred CC-CEEEEEECCCCccHHHHHHHHHHccccccccccccccceEEEEECCCCCchHH-----HCHHHHHHHHHHHHHh
Confidence 43 59999999998764 35566666554200 012689999999995543 2335677888889875
No 98
>KOG1454 consensus Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=98.76 E-value=1.1e-07 Score=75.09 Aligned_cols=59 Identities=39% Similarity=0.518 Sum_probs=43.1
Q ss_pred CEEEEEcCCccchhhHHHHHHHHHhcCCCccEEEEEecCCCccccccCCCchHHHHHHHHHHHHHHhC
Q 039671 128 RVLIFVAEKDFLKPVAMNYYEDLKKSGWKGTVELVETHGEGHSFYFDNLKCEKAVELINKFVSFITQL 195 (195)
Q Consensus 128 p~~i~~g~~D~l~~~~~~~~~~l~~~~~g~~~~~~~~~g~~H~f~~~~~~~~~~~~~~~~~~~fl~~~ 195 (195)
|++|+.|+.|.+++.. .+..+++. ..+++++++++++|.-.. +..++....+..|+.++
T Consensus 266 pvlii~G~~D~~~p~~--~~~~~~~~--~pn~~~~~I~~~gH~~h~-----e~Pe~~~~~i~~Fi~~~ 324 (326)
T KOG1454|consen 266 PVLIIWGDKDQIVPLE--LAEELKKK--LPNAELVEIPGAGHLPHL-----ERPEEVAALLRSFIARL 324 (326)
T ss_pred ceEEEEcCcCCccCHH--HHHHHHhh--CCCceEEEeCCCCccccc-----CCHHHHHHHHHHHHHHh
Confidence 6999999999988643 33445554 356799999999994433 34467788888888753
No 99
>KOG2237 consensus Predicted serine protease [Posttranslational modification, protein turnover, chaperones]
Probab=98.72 E-value=1.2e-07 Score=78.72 Aligned_cols=139 Identities=19% Similarity=0.232 Sum_probs=93.4
Q ss_pred chHHHHHHHHHHHHHhccCCCCCCCCCCCCCCCceEEeeccchHHHHHHHHHHhccCCCCCCceeEEEeeccccCCCCcc
Q 039671 15 ACYEDSWAALNWVASHAGGNGPEPWLNDHADFGRVFIGGGSAGGNIAHTLAFQVGSIGLPRVKLVGVIMVHPFFGGTSPE 94 (195)
Q Consensus 15 ~~~~D~~~a~~~l~~~~~~~~~~~~~~~~~d~~~i~l~G~S~Gg~la~~~a~~~~~~~~~~~~~~~~i~~~p~~~~~~~~ 94 (195)
..++|..++.+||.++.. ..+++.++.|.|+||.|+.++.-+.++ .++++|+-.|++|+....
T Consensus 528 N~f~Dfia~AeyLve~gy-----------t~~~kL~i~G~SaGGlLvga~iN~rPd------LF~avia~VpfmDvL~t~ 590 (712)
T KOG2237|consen 528 NSFDDFIACAEYLVENGY-----------TQPSKLAIEGGSAGGLLVGACINQRPD------LFGAVIAKVPFMDVLNTH 590 (712)
T ss_pred ccHHHHHHHHHHHHHcCC-----------CCccceeEecccCccchhHHHhccCch------HhhhhhhcCcceehhhhh
Confidence 468999999999999864 789999999999999998877777654 789999999999875432
Q ss_pred ---HHHHH--HhhC-CCC-CCCCCCCCCC--Chhhhcc-cCCCCEEEEEcCCccch--hhHHHHHHHHHhcC---CC--c
Q 039671 95 ---EDEMW--LYMC-PTN-GGLQDPRLKP--PAEDLAR-LGCERVLIFVAEKDFLK--PVAMNYYEDLKKSG---WK--G 157 (195)
Q Consensus 95 ---~~~~~--~~~~-~~~-~~~~~~~~~p--~~~~~~~-~~~pp~~i~~g~~D~l~--~~~~~~~~~l~~~~---~g--~ 157 (195)
....| .+-. +.. .......++| ..+.+.. ...|-++|..+.+|..| -++..|.++|+.+- .. .
T Consensus 591 ~~tilplt~sd~ee~g~p~~~~~~~~i~~y~pv~~i~~q~~YPS~lvtta~hD~RV~~~~~~K~vAklre~~~~~~~q~~ 670 (712)
T KOG2237|consen 591 KDTILPLTTSDYEEWGNPEDFEDLIKISPYSPVDNIKKQVQYPSMLVTTADHDDRVGPLESLKWVAKLREATCDSLKQTN 670 (712)
T ss_pred ccCccccchhhhcccCChhhhhhhheecccCccCCCchhccCcceEEeeccCCCcccccchHHHHHHHHHHhhcchhcCC
Confidence 01111 0000 001 1111122333 1222222 24789999999998655 35888888888650 01 4
Q ss_pred cEEEEEecCCCcc
Q 039671 158 TVELVETHGEGHS 170 (195)
Q Consensus 158 ~~~~~~~~g~~H~ 170 (195)
++-+.+..+++|+
T Consensus 671 pvll~i~~~agH~ 683 (712)
T KOG2237|consen 671 PVLLRIETKAGHG 683 (712)
T ss_pred CEEEEEecCCccc
Confidence 5788899999993
No 100
>KOG4667 consensus Predicted esterase [Lipid transport and metabolism]
Probab=98.67 E-value=2.3e-07 Score=67.67 Aligned_cols=134 Identities=16% Similarity=0.145 Sum_probs=87.9
Q ss_pred CCchHHHHHHHHHHHHHhccCCCCCCCCCCCCCCCceEEeeccchHHHHHHHHHHhccCCCCCCceeEEEeeccccCCCC
Q 039671 13 IPACYEDSWAALNWVASHAGGNGPEPWLNDHADFGRVFIGGGSAGGNIAHTLAFQVGSIGLPRVKLVGVIMVHPFFGGTS 92 (195)
Q Consensus 13 ~p~~~~D~~~a~~~l~~~~~~~~~~~~~~~~~d~~~i~l~G~S~Gg~la~~~a~~~~~~~~~~~~~~~~i~~~p~~~~~~ 92 (195)
+....+|+..+++++... +..--+|+|||-||..++..+.+.. .++-+|.++|-++...
T Consensus 85 ~~~eadDL~sV~q~~s~~--------------nr~v~vi~gHSkGg~Vvl~ya~K~~-------d~~~viNcsGRydl~~ 143 (269)
T KOG4667|consen 85 YNTEADDLHSVIQYFSNS--------------NRVVPVILGHSKGGDVVLLYASKYH-------DIRNVINCSGRYDLKN 143 (269)
T ss_pred ccchHHHHHHHHHHhccC--------------ceEEEEEEeecCccHHHHHHHHhhc-------CchheEEcccccchhc
Confidence 344559999999999763 2223478999999999999999987 4788899999988754
Q ss_pred cc--------HHHHH-HhhCCCCC--CCCCCCCCC--Chhh---------h-cccCCCCEEEEEcCCccch--hhHHHHH
Q 039671 93 PE--------EDEMW-LYMCPTNG--GLQDPRLKP--PAED---------L-ARLGCERVLIFVAEKDFLK--PVAMNYY 147 (195)
Q Consensus 93 ~~--------~~~~~-~~~~~~~~--~~~~~~~~p--~~~~---------~-~~~~~pp~~i~~g~~D~l~--~~~~~~~ 147 (195)
.. ..+.. +.++.... ........+ ..+. + .+.++ |+|-+||..|.++ +.+.+|+
T Consensus 144 ~I~eRlg~~~l~~ike~Gfid~~~rkG~y~~rvt~eSlmdrLntd~h~aclkId~~C-~VLTvhGs~D~IVPve~AkefA 222 (269)
T KOG4667|consen 144 GINERLGEDYLERIKEQGFIDVGPRKGKYGYRVTEESLMDRLNTDIHEACLKIDKQC-RVLTVHGSEDEIVPVEDAKEFA 222 (269)
T ss_pred chhhhhcccHHHHHHhCCceecCcccCCcCceecHHHHHHHHhchhhhhhcCcCccC-ceEEEeccCCceeechhHHHHH
Confidence 43 11111 11111111 111111111 0000 1 11133 5999999999877 5688998
Q ss_pred HHHHhcCCCccEEEEEecCCCcccccc
Q 039671 148 EDLKKSGWKGTVELVETHGEGHSFYFD 174 (195)
Q Consensus 148 ~~l~~~~~g~~~~~~~~~g~~H~f~~~ 174 (195)
+.+.++ +++++||++|.|...
T Consensus 223 k~i~nH------~L~iIEgADHnyt~~ 243 (269)
T KOG4667|consen 223 KIIPNH------KLEIIEGADHNYTGH 243 (269)
T ss_pred HhccCC------ceEEecCCCcCccch
Confidence 888777 999999999988654
No 101
>COG2382 Fes Enterochelin esterase and related enzymes [Inorganic ion transport and metabolism]
Probab=98.67 E-value=2.8e-07 Score=70.54 Aligned_cols=110 Identities=17% Similarity=0.064 Sum_probs=74.4
Q ss_pred CCCCceEEeeccchHHHHHHHHHHhccCCCCCCceeEEEeeccccCCCCccHHHHHHhhCCCCCCCCCCCCCC-Chhhhc
Q 039671 44 ADFGRVFIGGGSAGGNIAHTLAFQVGSIGLPRVKLVGVIMVHPFFGGTSPEEDEMWLYMCPTNGGLQDPRLKP-PAEDLA 122 (195)
Q Consensus 44 ~d~~~i~l~G~S~Gg~la~~~a~~~~~~~~~~~~~~~~i~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-~~~~~~ 122 (195)
-+.++-+|+|.|.||..+++.+..++. ++..+++.||.++-.... ...+...... ......
T Consensus 174 ~~a~~r~L~G~SlGG~vsL~agl~~Pe------~FG~V~s~Sps~~~~~~~------------~~~~~~~~~~l~~~~a~ 235 (299)
T COG2382 174 ADADGRVLAGDSLGGLVSLYAGLRHPE------RFGHVLSQSGSFWWTPLD------------TQPQGEVAESLKILHAI 235 (299)
T ss_pred ccCCCcEEeccccccHHHHHHHhcCch------hhceeeccCCccccCccc------------cccccchhhhhhhhhcc
Confidence 577889999999999999999999865 899999999998874431 0000000000 000011
Q ss_pred ccCCCCEEEEEcCCccchhhHHHHHHHHHhcCCCccEEEEEecCCCcccccc
Q 039671 123 RLGCERVLIFVAEKDFLKPVAMNYYEDLKKSGWKGTVELVETHGEGHSFYFD 174 (195)
Q Consensus 123 ~~~~pp~~i~~g~~D~l~~~~~~~~~~l~~~~~g~~~~~~~~~g~~H~f~~~ 174 (195)
....--++...++.+.+....+.+++.|+++ |.++.+..|+| +|++..+
T Consensus 236 ~~~~~~~l~~g~~~~~~~~pNr~L~~~L~~~--g~~~~yre~~G-gHdw~~W 284 (299)
T COG2382 236 GTDERIVLTTGGEEGDFLRPNRALAAQLEKK--GIPYYYREYPG-GHDWAWW 284 (299)
T ss_pred CccceEEeecCCccccccchhHHHHHHHHhc--CCcceeeecCC-CCchhHh
Confidence 1111112333334456778899999999999 89999999999 9988655
No 102
>PF12740 Chlorophyllase2: Chlorophyllase enzyme; InterPro: IPR010821 This family consists of several chlorophyllase proteins (3.1.1.14 from EC). Chlorophyllase (Chlase) is the first enzyme involved in chlorophyll degradation and catalyses the hydrolysis of the ester bond to yield chlorophyllide and phytol [, , ].; GO: 0047746 chlorophyllase activity, 0015996 chlorophyll catabolic process
Probab=98.66 E-value=9.8e-07 Score=66.85 Aligned_cols=140 Identities=19% Similarity=0.263 Sum_probs=83.5
Q ss_pred CCchHHHHHHHHHHHHHhccCCCCCCCCCCCCCCCceEEeeccchHHHHHHHHHHhccCCCCCCceeEEEeeccccCCCC
Q 039671 13 IPACYEDSWAALNWVASHAGGNGPEPWLNDHADFGRVFIGGGSAGGNIAHTLAFQVGSIGLPRVKLVGVIMVHPFFGGTS 92 (195)
Q Consensus 13 ~p~~~~D~~~a~~~l~~~~~~~~~~~~~~~~~d~~~i~l~G~S~Gg~la~~~a~~~~~~~~~~~~~~~~i~~~p~~~~~~ 92 (195)
-...++++.+.++|+.+.....- ..+...|.++++|+|||.||-+|..++....+... ..++++++++.|+-.+..
T Consensus 60 ~~~~~~~~~~vi~Wl~~~L~~~l---~~~v~~D~s~l~l~GHSrGGk~Af~~al~~~~~~~-~~~~~ali~lDPVdG~~~ 135 (259)
T PF12740_consen 60 DTDEVASAAEVIDWLAKGLESKL---PLGVKPDFSKLALAGHSRGGKVAFAMALGNASSSL-DLRFSALILLDPVDGMSK 135 (259)
T ss_pred cchhHHHHHHHHHHHHhcchhhc---cccccccccceEEeeeCCCCHHHHHHHhhhccccc-ccceeEEEEecccccccc
Confidence 34578899999999988543221 13334699999999999999999988888743221 247999999999964311
Q ss_pred ccHHHHHHhhCCCCCCCCCCCCCCChhhhcccCCCCEEEEEcCCcc---------chhhHHHHHHHHHhcCCCccEEEEE
Q 039671 93 PEEDEMWLYMCPTNGGLQDPRLKPPAEDLARLGCERVLIFVAEKDF---------LKPVAMNYYEDLKKSGWKGTVELVE 163 (195)
Q Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~pp~~i~~g~~D~---------l~~~~~~~~~~l~~~~~g~~~~~~~ 163 (195)
. ..... .-....| ..+. ..+ |++++-.+... ..+....+.+...+. ..+.-..+
T Consensus 136 ~----------~~~~P-~v~~~~p--~s~~-~~~-P~lviGtGLg~~~~~~~~~~CaP~g~n~~~Ff~~~--~~p~~~~v 198 (259)
T PF12740_consen 136 G----------SQTEP-PVLTYTP--QSFD-FSM-PALVIGTGLGGEPRNPLFPPCAPAGVNYREFFDEC--KPPSWHFV 198 (259)
T ss_pred c----------cCCCC-ccccCcc--cccC-CCC-CeEEEecccCcccccccCCCCCCCCCCHHHHHHhc--CCCEEEEE
Confidence 1 00000 0000112 1221 112 68888776653 224444444444444 45556667
Q ss_pred ecCCCcccccc
Q 039671 164 THGEGHSFYFD 174 (195)
Q Consensus 164 ~~g~~H~f~~~ 174 (195)
..+.+| +++.
T Consensus 199 ~~~~GH-~d~L 208 (259)
T PF12740_consen 199 AKDYGH-MDFL 208 (259)
T ss_pred eCCCCc-hHhh
Confidence 789999 4444
No 103
>KOG1838 consensus Alpha/beta hydrolase [General function prediction only]
Probab=98.65 E-value=3.1e-07 Score=73.37 Aligned_cols=155 Identities=21% Similarity=0.199 Sum_probs=88.1
Q ss_pred chHHHHHHHHHHHHHhccCCCCCCCCCCCCCCCceEEeeccchHHHHHHHHHHhccCCCCCCceeEEEeeccccCC--CC
Q 039671 15 ACYEDSWAALNWVASHAGGNGPEPWLNDHADFGRVFIGGGSAGGNIAHTLAFQVGSIGLPRVKLVGVIMVHPFFGG--TS 92 (195)
Q Consensus 15 ~~~~D~~~a~~~l~~~~~~~~~~~~~~~~~d~~~i~l~G~S~Gg~la~~~a~~~~~~~~~~~~~~~~i~~~p~~~~--~~ 92 (195)
.--+|+..+++++++.. ...+++.+|.|+||+|...+..+..+.. +-..|+++.+||--. ..
T Consensus 179 g~t~Dl~~~v~~i~~~~-------------P~a~l~avG~S~Gg~iL~nYLGE~g~~~---~l~~a~~v~~Pwd~~~~~~ 242 (409)
T KOG1838|consen 179 GWTEDLREVVNHIKKRY-------------PQAPLFAVGFSMGGNILTNYLGEEGDNT---PLIAAVAVCNPWDLLAASR 242 (409)
T ss_pred CCHHHHHHHHHHHHHhC-------------CCCceEEEEecchHHHHHHHhhhccCCC---CceeEEEEeccchhhhhhh
Confidence 34599999999999984 3458999999999999997666655432 144555555566422 11
Q ss_pred cc-------------------------------------------HHHHHHhhCCC---CCCCCC--CCCCCChhhhccc
Q 039671 93 PE-------------------------------------------EDEMWLYMCPT---NGGLQD--PRLKPPAEDLARL 124 (195)
Q Consensus 93 ~~-------------------------------------------~~~~~~~~~~~---~~~~~~--~~~~p~~~~~~~~ 124 (195)
.+ ..++-..+... ....+. ...|+ ...+.++
T Consensus 243 ~~~~~~~~~~y~~~l~~~l~~~~~~~r~~~~~~~vd~d~~~~~~SvreFD~~~t~~~~gf~~~deYY~~aSs-~~~v~~I 321 (409)
T KOG1838|consen 243 SIETPLYRRFYNRALTLNLKRIVLRHRHTLFEDPVDFDVILKSRSVREFDEALTRPMFGFKSVDEYYKKASS-SNYVDKI 321 (409)
T ss_pred HHhcccchHHHHHHHHHhHHHHHhhhhhhhhhccchhhhhhhcCcHHHHHhhhhhhhcCCCcHHHHHhhcch-hhhcccc
Confidence 10 00110110000 000000 11111 1223333
Q ss_pred CCCCEEEEEcCCccchhh-HHHHHHHHHhcCCCccEEEEEecCCCc-cccccCCCchHHHHHHHH-HHHHHH
Q 039671 125 GCERVLIFVAEKDFLKPV-AMNYYEDLKKSGWKGTVELVETHGEGH-SFYFDNLKCEKAVELINK-FVSFIT 193 (195)
Q Consensus 125 ~~pp~~i~~g~~D~l~~~-~~~~~~~l~~~~~g~~~~~~~~~g~~H-~f~~~~~~~~~~~~~~~~-~~~fl~ 193 (195)
.. |++++++.+|++++. +.-.. ..+++ ..+-+.+-.-++| +|.. ...+....|+++ +.+|++
T Consensus 322 ~V-P~L~ina~DDPv~p~~~ip~~-~~~~n---p~v~l~~T~~GGHlgfle--g~~p~~~~w~~~~l~ef~~ 386 (409)
T KOG1838|consen 322 KV-PLLCINAADDPVVPEEAIPID-DIKSN---PNVLLVITSHGGHLGFLE--GLWPSARTWMDKLLVEFLG 386 (409)
T ss_pred cc-cEEEEecCCCCCCCcccCCHH-HHhcC---CcEEEEEeCCCceeeeec--cCCCccchhHHHHHHHHHH
Confidence 33 599999999999965 44443 33333 4777777777899 4433 233455666766 666665
No 104
>PLN03084 alpha/beta hydrolase fold protein; Provisional
Probab=98.62 E-value=1.4e-06 Score=70.40 Aligned_cols=39 Identities=13% Similarity=0.004 Sum_probs=33.2
Q ss_pred CCCceEEeeccchHHHHHHHHHHhccCCCCCCceeEEEeeccccC
Q 039671 45 DFGRVFIGGGSAGGNIAHTLAFQVGSIGLPRVKLVGVIMVHPFFG 89 (195)
Q Consensus 45 d~~~i~l~G~S~Gg~la~~~a~~~~~~~~~~~~~~~~i~~~p~~~ 89 (195)
..+++.|+|+|+||.+|+.++.+.++ +++++|+++|...
T Consensus 195 ~~~~~~LvG~s~GG~ia~~~a~~~P~------~v~~lILi~~~~~ 233 (383)
T PLN03084 195 KSDKVSLVVQGYFSPPVVKYASAHPD------KIKKLILLNPPLT 233 (383)
T ss_pred CCCCceEEEECHHHHHHHHHHHhChH------hhcEEEEECCCCc
Confidence 34689999999999999999988754 8999999998754
No 105
>COG3458 Acetyl esterase (deacetylase) [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=98.62 E-value=5.4e-08 Score=73.15 Aligned_cols=130 Identities=20% Similarity=0.194 Sum_probs=84.2
Q ss_pred CchHHHHHHHHHHHHHhccCCCCCCCCCCCCCCCceEEeeccchHHHHHHHHHHhccCCCCCCceeEEEeeccccCCCCc
Q 039671 14 PACYEDSWAALNWVASHAGGNGPEPWLNDHADFGRVFIGGGSAGGNIAHTLAFQVGSIGLPRVKLVGVIMVHPFFGGTSP 93 (195)
Q Consensus 14 p~~~~D~~~a~~~l~~~~~~~~~~~~~~~~~d~~~i~l~G~S~Gg~la~~~a~~~~~~~~~~~~~~~~i~~~p~~~~~~~ 93 (195)
-....|+..|++-+.+... +|.+||++.|.|.||.|++.++.-.+ +++++++.+|.+.....
T Consensus 154 r~v~~D~~~ave~~~sl~~-----------vde~Ri~v~G~SqGGglalaaaal~~-------rik~~~~~~Pfl~df~r 215 (321)
T COG3458 154 RGVFLDAVRAVEILASLDE-----------VDEERIGVTGGSQGGGLALAAAALDP-------RIKAVVADYPFLSDFPR 215 (321)
T ss_pred eeehHHHHHHHHHHhccCc-----------cchhheEEeccccCchhhhhhhhcCh-------hhhcccccccccccchh
Confidence 4567799999998877654 89999999999999999997776643 89999999999876444
Q ss_pred c--------HHHHHHhhCCCCCCCCC------CCCCC--ChhhhcccCCCCEEEEEcCCccchhhHHHHHHHHHhcCCCc
Q 039671 94 E--------EDEMWLYMCPTNGGLQD------PRLKP--PAEDLARLGCERVLIFVAEKDFLKPVAMNYYEDLKKSGWKG 157 (195)
Q Consensus 94 ~--------~~~~~~~~~~~~~~~~~------~~~~p--~~~~~~~~~~pp~~i~~g~~D~l~~~~~~~~~~l~~~~~g~ 157 (195)
+ -.....++ ......+. .++.. .+..++. |+++..|-.|.+++.+..|+.. +.. -.
T Consensus 216 ~i~~~~~~~ydei~~y~-k~h~~~e~~v~~TL~yfD~~n~A~RiK~----pvL~svgL~D~vcpPstqFA~y-N~l--~~ 287 (321)
T COG3458 216 AIELATEGPYDEIQTYF-KRHDPKEAEVFETLSYFDIVNLAARIKV----PVLMSVGLMDPVCPPSTQFAAY-NAL--TT 287 (321)
T ss_pred heeecccCcHHHHHHHH-HhcCchHHHHHHHHhhhhhhhHHHhhcc----ceEEeecccCCCCCChhhHHHh-hcc--cC
Confidence 3 11111111 11100000 00111 2222222 7999999999999877666443 222 23
Q ss_pred cEEEEEecCCCc
Q 039671 158 TVELVETHGEGH 169 (195)
Q Consensus 158 ~~~~~~~~g~~H 169 (195)
+.++.+|+--.|
T Consensus 288 ~K~i~iy~~~aH 299 (321)
T COG3458 288 SKTIEIYPYFAH 299 (321)
T ss_pred CceEEEeecccc
Confidence 456777777678
No 106
>PF03583 LIP: Secretory lipase ; InterPro: IPR005152 This entry represents a family of secreted lipases. Family members include the LIP lipases from Candida albicans, which are expressed and secreted during the infection cycle of these pathogens [].; GO: 0004806 triglyceride lipase activity, 0016042 lipid catabolic process
Probab=98.62 E-value=1.9e-06 Score=67.17 Aligned_cols=43 Identities=26% Similarity=0.234 Sum_probs=37.7
Q ss_pred CCEEEEEcCCccchh--hHHHHHHHHHhcCCC-ccEEEEEecCCCccc
Q 039671 127 ERVLIFVAEKDFLKP--VAMNYYEDLKKSGWK-GTVELVETHGEGHSF 171 (195)
Q Consensus 127 pp~~i~~g~~D~l~~--~~~~~~~~l~~~~~g-~~~~~~~~~g~~H~f 171 (195)
-|++|.+|..|.+++ .+..+++++-++ | .+++++.+++.+|.-
T Consensus 220 ~Pv~i~~g~~D~vvP~~~~~~l~~~~c~~--G~a~V~~~~~~~~~H~~ 265 (290)
T PF03583_consen 220 VPVLIYQGTADEVVPPADTDALVAKWCAA--GGADVEYVRYPGGGHLG 265 (290)
T ss_pred CCEEEEecCCCCCCChHHHHHHHHHHHHc--CCCCEEEEecCCCChhh
Confidence 379999999998884 588999999999 7 799999999999944
No 107
>TIGR01838 PHA_synth_I poly(R)-hydroxyalkanoic acid synthase, class I. This model represents the class I subfamily of poly(R)-hydroxyalkanoate synthases, which polymerizes hydroxyacyl-CoAs with three to five carbons in the hydroxyacyl backbone into aliphatic esters termed poly(R)-hydroxyalkanoic acids. These polymers accumulate as carbon and energy storage inclusions in many species and can amount to 90 percent of the dry weight of cell.
Probab=98.61 E-value=9.7e-07 Score=73.84 Aligned_cols=57 Identities=19% Similarity=0.169 Sum_probs=41.3
Q ss_pred HHHHHHHHHHHHhccCCCCCCCCCCCCCCCceEEeeccchHHHHHH----HHHHhccCCCCCCceeEEEeeccccCCCC
Q 039671 18 EDSWAALNWVASHAGGNGPEPWLNDHADFGRVFIGGGSAGGNIAHT----LAFQVGSIGLPRVKLVGVIMVHPFFGGTS 92 (195)
Q Consensus 18 ~D~~~a~~~l~~~~~~~~~~~~~~~~~d~~~i~l~G~S~Gg~la~~----~a~~~~~~~~~~~~~~~~i~~~p~~~~~~ 92 (195)
+++.++++.+.+. .+.+++.++|||+||.+++. ++.... +.++++++++...+|+..
T Consensus 246 ~~i~~al~~v~~~-------------~g~~kv~lvG~cmGGtl~a~ala~~aa~~~-----~~rv~slvll~t~~Df~~ 306 (532)
T TIGR01838 246 DGVIAALEVVEAI-------------TGEKQVNCVGYCIGGTLLSTALAYLAARGD-----DKRIKSATFFTTLLDFSD 306 (532)
T ss_pred HHHHHHHHHHHHh-------------cCCCCeEEEEECcCcHHHHHHHHHHHHhCC-----CCccceEEEEecCcCCCC
Confidence 4588888888876 56789999999999998643 222221 126899999888877653
No 108
>COG4947 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=98.61 E-value=7.4e-09 Score=72.59 Aligned_cols=123 Identities=16% Similarity=0.105 Sum_probs=90.4
Q ss_pred hHHHHHHHHHHHHHhccCCCCCCCCCCCCCCCceEEeeccchHHHHHHHHHHhccCCCCCCceeEEEeeccccCCCCccH
Q 039671 16 CYEDSWAALNWVASHAGGNGPEPWLNDHADFGRVFIGGGSAGGNIAHTLAFQVGSIGLPRVKLVGVIMVHPFFGGTSPEE 95 (195)
Q Consensus 16 ~~~D~~~a~~~l~~~~~~~~~~~~~~~~~d~~~i~l~G~S~Gg~la~~~a~~~~~~~~~~~~~~~~i~~~p~~~~~~~~~ 95 (195)
.++--.+--+|+.+++ -+.+..+.|+|+||+.|+++..+.+. ...++|.+||++|..+.+
T Consensus 83 r~~rH~AyerYv~eEa-------------lpgs~~~sgcsmGayhA~nfvfrhP~------lftkvialSGvYdardff- 142 (227)
T COG4947 83 RAERHRAYERYVIEEA-------------LPGSTIVSGCSMGAYHAANFVFRHPH------LFTKVIALSGVYDARDFF- 142 (227)
T ss_pred HHHHHHHHHHHHHHhh-------------cCCCccccccchhhhhhhhhheeChh------HhhhheeecceeeHHHhc-
Confidence 4444555667788773 34568899999999999999999875 788999999999985432
Q ss_pred HHHHHhhCCCCCCCCCCCCCC-----------ChhhhcccCCCCEEEEEcCCccchhhHHHHHHHHHhcCCCccEEEEEe
Q 039671 96 DEMWLYMCPTNGGLQDPRLKP-----------PAEDLARLGCERVLIFVAEKDFLKPVAMNYYEDLKKSGWKGTVELVET 164 (195)
Q Consensus 96 ~~~~~~~~~~~~~~~~~~~~p-----------~~~~~~~~~~pp~~i~~g~~D~l~~~~~~~~~~l~~~~~g~~~~~~~~ 164 (195)
+.....+..+.|| ..+.++.+ .+.+..|.+|+..++.+.+.+.|.++ .++.-+.++
T Consensus 143 --------g~yyddDv~ynsP~dylpg~~dp~~l~rlr~~---~~vfc~G~e~~~L~~~~~L~~~l~dK--qipaw~~~W 209 (227)
T COG4947 143 --------GGYYDDDVYYNSPSDYLPGLADPFRLERLRRI---DMVFCIGDEDPFLDNNQHLSRLLSDK--QIPAWMHVW 209 (227)
T ss_pred --------cccccCceeecChhhhccCCcChHHHHHHhhc---cEEEEecCccccccchHHHHHHhccc--cccHHHHHh
Confidence 1111111122222 33455555 68999999999999999999999988 788888889
Q ss_pred cCCCccc
Q 039671 165 HGEGHSF 171 (195)
Q Consensus 165 ~g~~H~f 171 (195)
.|..|++
T Consensus 210 ggvaHdw 216 (227)
T COG4947 210 GGVAHDW 216 (227)
T ss_pred ccccccc
Confidence 8888866
No 109
>PF02129 Peptidase_S15: X-Pro dipeptidyl-peptidase (S15 family); InterPro: IPR000383 This entry represents a domain found peptidases Xaa-Pro dipeptidyl-peptidase and glutaryl-7-aminocephalosporanic-acid acylase, which belong to MEROPS peptidase families S15 and S45 respectively []. It is also found in hydrolases from the CocE/NonD family. Cocaine esterase (CocE) hydrolyzes cocaine endowing the bacteria with the ability to utilise cocaine as a sole source of carbon and energy []. ; GO: 0004177 aminopeptidase activity, 0006508 proteolysis; PDB: 1LNS_A 3PUI_A 3PUH_B 1JU3_A 3I2I_A 3I2G_A 1JU4_A 3I2K_A 3IDA_A 3I2H_A ....
Probab=98.59 E-value=1.5e-07 Score=72.68 Aligned_cols=136 Identities=21% Similarity=0.224 Sum_probs=88.5
Q ss_pred CCchHHHHHHHHHHHHHhccCCCCCCCCCCCCCCCceEEeeccchHHHHHHHHHHhccCCCCCCceeEEEeeccccCCCC
Q 039671 13 IPACYEDSWAALNWVASHAGGNGPEPWLNDHADFGRVFIGGGSAGGNIAHTLAFQVGSIGLPRVKLVGVIMVHPFFGGTS 92 (195)
Q Consensus 13 ~p~~~~D~~~a~~~l~~~~~~~~~~~~~~~~~d~~~i~l~G~S~Gg~la~~~a~~~~~~~~~~~~~~~~i~~~p~~~~~~ 92 (195)
.+...+|..++++|+.++. -...||+++|.|.+|..++.+|...+ +.+++++..+++.|...
T Consensus 79 ~~~e~~D~~d~I~W~~~Qp------------ws~G~VGm~G~SY~G~~q~~~A~~~~------p~LkAi~p~~~~~d~~~ 140 (272)
T PF02129_consen 79 SPNEAQDGYDTIEWIAAQP------------WSNGKVGMYGISYGGFTQWAAAARRP------PHLKAIVPQSGWSDLYR 140 (272)
T ss_dssp SHHHHHHHHHHHHHHHHCT------------TEEEEEEEEEETHHHHHHHHHHTTT-------TTEEEEEEESE-SBTCC
T ss_pred ChhHHHHHHHHHHHHHhCC------------CCCCeEEeeccCHHHHHHHHHHhcCC------CCceEEEecccCCcccc
Confidence 5668899999999999983 45679999999999999988887543 48999999999988865
Q ss_pred cc----------HHHHH-------HhhCCCCC------------------------CC--------CCCCCCC------C
Q 039671 93 PE----------EDEMW-------LYMCPTNG------------------------GL--------QDPRLKP------P 117 (195)
Q Consensus 93 ~~----------~~~~~-------~~~~~~~~------------------------~~--------~~~~~~p------~ 117 (195)
.. ....| ........ .. ......+ .
T Consensus 141 ~~~~~gG~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~ 220 (272)
T PF02129_consen 141 DSIYPGGAFRLGFFAGWEDLQSQQEDPQSRPAPDRDYLRERARYEALGDSPLGRLPRDPPYWDEWLDHPPYDPFWQERSP 220 (272)
T ss_dssp TSSEETTEEBCCHHHHHHHHHHHHHHHTCCCCSSSHHHHHHHHHHCHHHHHHHHCHGGTHHHHHHHHT-SSSHHHHTTBH
T ss_pred cchhcCCcccccchhHHHHHHHHhhcccCCCchhhhhhhhhhhhhhhhhHHHhhhccccHHHHHHHhCCCcCHHHHhCCh
Confidence 22 00011 00000000 00 0001111 0
Q ss_pred hhhhcccCCCCEEEEEcCCc-cchhhHHHHHHHHHhcCCC-ccEEEEEecCCCcc
Q 039671 118 AEDLARLGCERVLIFVAEKD-FLKPVAMNYYEDLKKSGWK-GTVELVETHGEGHS 170 (195)
Q Consensus 118 ~~~~~~~~~pp~~i~~g~~D-~l~~~~~~~~~~l~~~~~g-~~~~~~~~~g~~H~ 170 (195)
...+..++. |+|++.|-.| .+...+....++|++. + .+.++.+-|+ .|.
T Consensus 221 ~~~~~~i~v-P~l~v~Gw~D~~~~~~~~~~~~~l~~~--~~~~~~Liigpw-~H~ 271 (272)
T PF02129_consen 221 SERLDKIDV-PVLIVGGWYDTLFLRGALRAYEALRAP--GSKPQRLIIGPW-THG 271 (272)
T ss_dssp HHHHGG--S-EEEEEEETTCSSTSHHHHHHHHHHCTT--STC-EEEEEESE-STT
T ss_pred HHHHhhCCC-CEEEecccCCcccchHHHHHHHHhhcC--CCCCCEEEEeCC-CCC
Confidence 011223333 6999999999 6667889999999999 6 6778888887 673
No 110
>PLN02872 triacylglycerol lipase
Probab=98.59 E-value=1.4e-07 Score=76.31 Aligned_cols=60 Identities=18% Similarity=0.180 Sum_probs=40.4
Q ss_pred CEEEEEcCCccchhh--HHHHHHHHHhcCCCccEEEEEecCCCccccccCCCchHHHHHHHHHHHHHHh
Q 039671 128 RVLIFVAEKDFLKPV--AMNYYEDLKKSGWKGTVELVETHGEGHSFYFDNLKCEKAVELINKFVSFITQ 194 (195)
Q Consensus 128 p~~i~~g~~D~l~~~--~~~~~~~l~~~~~g~~~~~~~~~g~~H~f~~~~~~~~~~~~~~~~~~~fl~~ 194 (195)
|+++++|++|.+++. +..+.+.+.. ..+++.+++.+|. ++.... +..+++.+.+++|+++
T Consensus 327 Pv~i~~G~~D~lv~~~dv~~l~~~Lp~-----~~~l~~l~~~gH~-dfi~~~-eape~V~~~Il~fL~~ 388 (395)
T PLN02872 327 PLWMGYGGTDGLADVTDVEHTLAELPS-----KPELLYLENYGHI-DFLLST-SAKEDVYNHMIQFFRS 388 (395)
T ss_pred cEEEEEcCCCCCCCHHHHHHHHHHCCC-----ccEEEEcCCCCCH-HHHhCc-chHHHHHHHHHHHHHH
Confidence 699999999998853 3444444422 2478889999994 221111 3346788899999875
No 111
>PF12715 Abhydrolase_7: Abhydrolase family; PDB: 3NUZ_C 3G8Y_A.
Probab=98.57 E-value=5.3e-08 Score=77.03 Aligned_cols=123 Identities=24% Similarity=0.158 Sum_probs=61.7
Q ss_pred HHHHHHHHHHHHhccCCCCCCCCCCCCCCCceEEeeccchHHHHHHHHHHhccCCCCCCceeEEEeeccccCCCCccHHH
Q 039671 18 EDSWAALNWVASHAGGNGPEPWLNDHADFGRVFIGGGSAGGNIAHTLAFQVGSIGLPRVKLVGVIMVHPFFGGTSPEEDE 97 (195)
Q Consensus 18 ~D~~~a~~~l~~~~~~~~~~~~~~~~~d~~~i~l~G~S~Gg~la~~~a~~~~~~~~~~~~~~~~i~~~p~~~~~~~~~~~ 97 (195)
-|...+++||..... +|++||+++|+|+||..++.++.-.. +|++.+..+=++.+.+..
T Consensus 208 ~ddmr~lDfL~slpe-----------VD~~RIG~~GfSmGg~~a~~LaALDd-------RIka~v~~~~l~~~~~~~--- 266 (390)
T PF12715_consen 208 WDDMRALDFLASLPE-----------VDPDRIGCMGFSMGGYRAWWLAALDD-------RIKATVANGYLCTTQERA--- 266 (390)
T ss_dssp HHHHHHHHHHCT-TT-----------EEEEEEEEEEEGGGHHHHHHHHHH-T-------T--EEEEES-B--HHHHH---
T ss_pred HHHHHHHHHHhcCcc-----------cCccceEEEeecccHHHHHHHHHcch-------hhHhHhhhhhhhccchhh---
Confidence 345558999988865 99999999999999999998887753 888876654333221110
Q ss_pred HHHhh-CCCCCC-----CCCCCCCC------ChhhhcccC-CCCEEEEEcCCccchhhHHHHHHHHHhcCCCccEEEEEe
Q 039671 98 MWLYM-CPTNGG-----LQDPRLKP------PAEDLARLG-CERVLIFVAEKDFLKPVAMNYYEDLKKSGWKGTVELVET 164 (195)
Q Consensus 98 ~~~~~-~~~~~~-----~~~~~~~p------~~~~~~~~~-~pp~~i~~g~~D~l~~~~~~~~~~l~~~~~g~~~~~~~~ 164 (195)
..+ .+.... .--..+-| ...++..+. --|++++.|+.|.+.+-.+. +....|.+.+++++.|
T Consensus 267 --~~mt~~~~~~~~~~~~~~~~~iPgl~r~~D~PdIasliAPRPll~~nG~~Dklf~iV~~---AY~~~~~p~n~~~~~~ 341 (390)
T PF12715_consen 267 --LLMTMPNNNGLRGFPNCICNYIPGLWRYFDFPDIASLIAPRPLLFENGGKDKLFPIVRR---AYAIMGAPDNFQIHHY 341 (390)
T ss_dssp --HHB----TTS----SS-GGG--TTCCCC--HHHHHHTTTTS-EEESS-B-HHHHHHHHH---HHHHTT-GGGEEE---
T ss_pred --HhhccccccccCcCcchhhhhCccHHhhCccHHHHHHhCCCcchhhcCCcccccHHHHH---HHHhcCCCcceEEeec
Confidence 000 000000 00001112 112222222 23799999999987655333 2232322568899999
Q ss_pred cC
Q 039671 165 HG 166 (195)
Q Consensus 165 ~g 166 (195)
|+
T Consensus 342 p~ 343 (390)
T PF12715_consen 342 PK 343 (390)
T ss_dssp GG
T ss_pred cc
Confidence 87
No 112
>PF03959 FSH1: Serine hydrolase (FSH1); InterPro: IPR005645 This entry represents proteins belonging to the AB hydrolase family. It consists of serine hydrolases of unknown specificity [, ] and includes uncharacterised proteins.; PDB: 1YCD_A.
Probab=98.55 E-value=4.7e-07 Score=67.36 Aligned_cols=118 Identities=17% Similarity=0.148 Sum_probs=66.1
Q ss_pred chHHHHHHHHHHHHHhccCCCCCCCCCCCCCCCceEEeeccchHHHHHHHHHHhccCCC--CCCceeEEEeeccccCCCC
Q 039671 15 ACYEDSWAALNWVASHAGGNGPEPWLNDHADFGRVFIGGGSAGGNIAHTLAFQVGSIGL--PRVKLVGVIMVHPFFGGTS 92 (195)
Q Consensus 15 ~~~~D~~~a~~~l~~~~~~~~~~~~~~~~~d~~~i~l~G~S~Gg~la~~~a~~~~~~~~--~~~~~~~~i~~~p~~~~~~ 92 (195)
...+++.++++++.+...+.+ -=.+|+|+|.||.+|+.++........ ....+|.+|+++++.....
T Consensus 81 ~~~~~~~~sl~~l~~~i~~~G-----------PfdGvlGFSQGA~lAa~ll~~~~~~~~~~~~~~~kf~V~~sg~~p~~~ 149 (212)
T PF03959_consen 81 HEYEGLDESLDYLRDYIEENG-----------PFDGVLGFSQGAALAALLLALQQRGRPDGAHPPFKFAVFISGFPPPDP 149 (212)
T ss_dssp GGG---HHHHHHHHHHHHHH--------------SEEEEETHHHHHHHHHHHHHHHHST--T----SEEEEES----EEE
T ss_pred ccccCHHHHHHHHHHHHHhcC-----------CeEEEEeecHHHHHHHHHHHHHHhhcccccCCCceEEEEEcccCCCch
Confidence 446677777777777654332 147899999999999988865442111 2247899999998865422
Q ss_pred ccHHHHHHhhCCCCCCCCCCCCCCChhhhcccCCCCEEEEEcCCccchh--hHHHHHHHHHhcCCCccEEEEEecCCCcc
Q 039671 93 PEEDEMWLYMCPTNGGLQDPRLKPPAEDLARLGCERVLIFVAEKDFLKP--VAMNYYEDLKKSGWKGTVELVETHGEGHS 170 (195)
Q Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~pp~~i~~g~~D~l~~--~~~~~~~~l~~~~~g~~~~~~~~~g~~H~ 170 (195)
. . ...... ..+ .+ |++-++|+.|.+++ .++.+++...+. .+++.++| +|.
T Consensus 150 ~------------~----~~~~~~--~~i-~i---PtlHv~G~~D~~~~~~~s~~L~~~~~~~-----~~v~~h~g-GH~ 201 (212)
T PF03959_consen 150 D------------Y----QELYDE--PKI-SI---PTLHVIGENDPVVPPERSEALAEMFDPD-----ARVIEHDG-GHH 201 (212)
T ss_dssp -------------G----TTTT----TT-------EEEEEEETT-SSS-HHHHHHHHHHHHHH-----EEEEEESS-SSS
T ss_pred h------------h----hhhhcc--ccC-CC---CeEEEEeCCCCCcchHHHHHHHHhccCC-----cEEEEECC-CCc
Confidence 1 0 000001 122 22 79999999999997 677787777662 37888888 785
Q ss_pred c
Q 039671 171 F 171 (195)
Q Consensus 171 f 171 (195)
+
T Consensus 202 v 202 (212)
T PF03959_consen 202 V 202 (212)
T ss_dssp -
T ss_pred C
Confidence 5
No 113
>KOG2551 consensus Phospholipase/carboxyhydrolase [Amino acid transport and metabolism]
Probab=98.54 E-value=1.5e-06 Score=63.69 Aligned_cols=93 Identities=19% Similarity=0.149 Sum_probs=62.3
Q ss_pred EEeeccchHHHHHHHHHHhc--cCCCCCCceeEEEeeccccCCCCccHHHHHHhhCCCCCCCCCCCCCCChhhhcccCCC
Q 039671 50 FIGGGSAGGNIAHTLAFQVG--SIGLPRVKLVGVIMVHPFFGGTSPEEDEMWLYMCPTNGGLQDPRLKPPAEDLARLGCE 127 (195)
Q Consensus 50 ~l~G~S~Gg~la~~~a~~~~--~~~~~~~~~~~~i~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~p 127 (195)
+|+|+|-|++|+..++.... ......+.++.+|++||........ .... ....++ +
T Consensus 107 GllGFSQGA~laa~l~~~~~~~~~~~~~P~~kF~v~~SGf~~~~~~~---------------~~~~---~~~~i~---~- 164 (230)
T KOG2551|consen 107 GLLGFSQGAALAALLAGLGQKGLPYVKQPPFKFAVFISGFKFPSKKL---------------DESA---YKRPLS---T- 164 (230)
T ss_pred cccccchhHHHHHHhhcccccCCcccCCCCeEEEEEEecCCCCcchh---------------hhhh---hccCCC---C-
Confidence 59999999999999998222 1223345789999999987652210 0000 001222 2
Q ss_pred CEEEEEcCCccchhh--HHHHHHHHHhcCCCccEEEEEecCCCccc
Q 039671 128 RVLIFVAEKDFLKPV--AMNYYEDLKKSGWKGTVELVETHGEGHSF 171 (195)
Q Consensus 128 p~~i~~g~~D~l~~~--~~~~~~~l~~~~~g~~~~~~~~~g~~H~f 171 (195)
|.|-+.|+.|.+++. +..+++..+++ .+...|| +|..
T Consensus 165 PSLHi~G~~D~iv~~~~s~~L~~~~~~a------~vl~Hpg-gH~V 203 (230)
T KOG2551|consen 165 PSLHIFGETDTIVPSERSEQLAESFKDA------TVLEHPG-GHIV 203 (230)
T ss_pred CeeEEecccceeecchHHHHHHHhcCCC------eEEecCC-CccC
Confidence 699999999998865 57777776655 6777777 8954
No 114
>COG2272 PnbA Carboxylesterase type B [Lipid metabolism]
Probab=98.51 E-value=3.6e-08 Score=79.91 Aligned_cols=77 Identities=27% Similarity=0.194 Sum_probs=59.4
Q ss_pred CCCcCCCCCC-------CC------CCchHHHHHHHHHHHHHhccCCCCCCCCCCCCCCCceEEeeccchHHHHHHHHHH
Q 039671 1 VSVEYGLFPD-------RP------IPACYEDSWAALNWVASHAGGNGPEPWLNDHADFGRVFIGGGSAGGNIAHTLAFQ 67 (195)
Q Consensus 1 ~~~~Yrlap~-------~~------~p~~~~D~~~a~~~l~~~~~~~~~~~~~~~~~d~~~i~l~G~S~Gg~la~~~a~~ 67 (195)
|++||||-+- .. -.-.+.|...|++|++++.+.+| .|+++|.|+|+|+||+.++.+...
T Consensus 129 VSvNYRLG~lGfL~~~~~~~~~~~~~n~Gl~DqilALkWV~~NIe~FG--------GDp~NVTl~GeSAGa~si~~Lla~ 200 (491)
T COG2272 129 VSVNYRLGALGFLDLSSLDTEDAFASNLGLLDQILALKWVRDNIEAFG--------GDPQNVTLFGESAGAASILTLLAV 200 (491)
T ss_pred EEeCcccccceeeehhhccccccccccccHHHHHHHHHHHHHHHHHhC--------CCccceEEeeccchHHHHHHhhcC
Confidence 5789998432 11 12378999999999999999999 999999999999999988766655
Q ss_pred hccCCCCCCceeEEEeeccccC
Q 039671 68 VGSIGLPRVKLVGVIMVHPFFG 89 (195)
Q Consensus 68 ~~~~~~~~~~~~~~i~~~p~~~ 89 (195)
-...+ .++.+|+.||...
T Consensus 201 P~AkG----LF~rAi~~Sg~~~ 218 (491)
T COG2272 201 PSAKG----LFHRAIALSGAAS 218 (491)
T ss_pred ccchH----HHHHHHHhCCCCC
Confidence 32222 4666778888775
No 115
>PLN02211 methyl indole-3-acetate methyltransferase
Probab=98.47 E-value=1.4e-05 Score=61.77 Aligned_cols=37 Identities=22% Similarity=0.232 Sum_probs=30.5
Q ss_pred CCceEEeeccchHHHHHHHHHHhccCCCCCCceeEEEeecccc
Q 039671 46 FGRVFIGGGSAGGNIAHTLAFQVGSIGLPRVKLVGVIMVHPFF 88 (195)
Q Consensus 46 ~~~i~l~G~S~Gg~la~~~a~~~~~~~~~~~~~~~~i~~~p~~ 88 (195)
.++++|+|||+||.++..++.+.++ +++++|++++..
T Consensus 86 ~~~v~lvGhS~GG~v~~~~a~~~p~------~v~~lv~~~~~~ 122 (273)
T PLN02211 86 NEKVILVGHSAGGLSVTQAIHRFPK------KICLAVYVAATM 122 (273)
T ss_pred CCCEEEEEECchHHHHHHHHHhChh------heeEEEEecccc
Confidence 4689999999999999988877643 788999887653
No 116
>TIGR00976 /NonD putative hydrolase, CocE/NonD family. This model represents a protein subfamily that includes the cocaine esterase CocE, several glutaryl-7-ACA acylases, and the putative diester hydrolase NonD of Streptomyces griseus (all hydrolases). This family shows extensive, low-level similarity to a family of xaa-pro dipeptidyl-peptidases, and local similarity by PSI-BLAST to many other hydrolases.
Probab=98.46 E-value=2.6e-06 Score=72.11 Aligned_cols=60 Identities=17% Similarity=0.097 Sum_probs=49.9
Q ss_pred CchHHHHHHHHHHHHHhccCCCCCCCCCCCCCCCceEEeeccchHHHHHHHHHHhccCCCCCCceeEEEeeccccCCC
Q 039671 14 PACYEDSWAALNWVASHAGGNGPEPWLNDHADFGRVFIGGGSAGGNIAHTLAFQVGSIGLPRVKLVGVIMVHPFFGGT 91 (195)
Q Consensus 14 p~~~~D~~~a~~~l~~~~~~~~~~~~~~~~~d~~~i~l~G~S~Gg~la~~~a~~~~~~~~~~~~~~~~i~~~p~~~~~ 91 (195)
....+|+.++++|+.++.- .+ .+|+++|+|+||.+++.++...+ ..++++++.+++.+..
T Consensus 76 ~~~~~D~~~~i~~l~~q~~-----------~~-~~v~~~G~S~GG~~a~~~a~~~~------~~l~aiv~~~~~~d~~ 135 (550)
T TIGR00976 76 SDEAADGYDLVDWIAKQPW-----------CD-GNVGMLGVSYLAVTQLLAAVLQP------PALRAIAPQEGVWDLY 135 (550)
T ss_pred cccchHHHHHHHHHHhCCC-----------CC-CcEEEEEeChHHHHHHHHhccCC------CceeEEeecCcccchh
Confidence 6788999999999988742 33 69999999999999998887754 3799999998887654
No 117
>COG0429 Predicted hydrolase of the alpha/beta-hydrolase fold [General function prediction only]
Probab=98.44 E-value=5.2e-07 Score=69.92 Aligned_cols=59 Identities=22% Similarity=0.228 Sum_probs=41.5
Q ss_pred CchHHHHHHHHHHHHHhccCCCCCCCCCCCCCCCceEEeeccchH-HHHHHHHHHhccCCCCCCceeEEEeeccccCC
Q 039671 14 PACYEDSWAALNWVASHAGGNGPEPWLNDHADFGRVFIGGGSAGG-NIAHTLAFQVGSIGLPRVKLVGVIMVHPFFGG 90 (195)
Q Consensus 14 p~~~~D~~~a~~~l~~~~~~~~~~~~~~~~~d~~~i~l~G~S~Gg-~la~~~a~~~~~~~~~~~~~~~~i~~~p~~~~ 90 (195)
...-+|+..+++|+++. .-+.++..+|.|.|| .||.+++.+..+. .+.+.+.+|-++|+
T Consensus 128 ~G~t~D~~~~l~~l~~~-------------~~~r~~~avG~SLGgnmLa~ylgeeg~d~-----~~~aa~~vs~P~Dl 187 (345)
T COG0429 128 SGETEDIRFFLDWLKAR-------------FPPRPLYAVGFSLGGNMLANYLGEEGDDL-----PLDAAVAVSAPFDL 187 (345)
T ss_pred ccchhHHHHHHHHHHHh-------------CCCCceEEEEecccHHHHHHHHHhhccCc-----ccceeeeeeCHHHH
Confidence 34559999999999986 346899999999999 5555666654432 45555555554443
No 118
>KOG4178 consensus Soluble epoxide hydrolase [Lipid transport and metabolism]
Probab=98.44 E-value=1.5e-05 Score=61.93 Aligned_cols=61 Identities=28% Similarity=0.311 Sum_probs=41.2
Q ss_pred CCEEEEEcCCccchhhHHHHHHHHHhcCCCccEEEEEecCCCccccccCCCchHHHHHHHHHHHHHHh
Q 039671 127 ERVLIFVAEKDFLKPVAMNYYEDLKKSGWKGTVELVETHGEGHSFYFDNLKCEKAVELINKFVSFITQ 194 (195)
Q Consensus 127 pp~~i~~g~~D~l~~~~~~~~~~l~~~~~g~~~~~~~~~g~~H~f~~~~~~~~~~~~~~~~~~~fl~~ 194 (195)
.|++++.|..|++.+.. .+.+.+++.- -...+..+++|.+| |... +..+++.+.+++|+++
T Consensus 259 iPv~fi~G~~D~v~~~p-~~~~~~rk~v-p~l~~~vv~~~~gH-~vqq----e~p~~v~~~i~~f~~~ 319 (322)
T KOG4178|consen 259 IPVLFIWGDLDPVLPYP-IFGELYRKDV-PRLTERVVIEGIGH-FVQQ----EKPQEVNQAILGFINS 319 (322)
T ss_pred cceEEEEecCcccccch-hHHHHHHHhh-ccccceEEecCCcc-cccc----cCHHHHHHHHHHHHHh
Confidence 37999999999877543 3333333331 01236888999999 6554 3447888889999875
No 119
>PF06028 DUF915: Alpha/beta hydrolase of unknown function (DUF915); InterPro: IPR010315 This family consists of bacterial proteins of unknown function, which are hydrolase-like.; PDB: 3LP5_A 3FLE_A 3DS8_A.
Probab=98.36 E-value=6.8e-06 Score=62.62 Aligned_cols=155 Identities=18% Similarity=0.173 Sum_probs=91.1
Q ss_pred CCCchHHHHHHHHHHHHHhccCCCCCCCCCCCCCCCceEEeeccchHHHHHHHHHHhc-cCCCCCCceeEEEeeccccCC
Q 039671 12 PIPACYEDSWAALNWVASHAGGNGPEPWLNDHADFGRVFIGGGSAGGNIAHTLAFQVG-SIGLPRVKLVGVIMVHPFFGG 90 (195)
Q Consensus 12 ~~p~~~~D~~~a~~~l~~~~~~~~~~~~~~~~~d~~~i~l~G~S~Gg~la~~~a~~~~-~~~~~~~~~~~~i~~~p~~~~ 90 (195)
.+..+.+-+..++.+|.+. ...+++-++||||||..+..++.... +..+| ++..++.+.+.++.
T Consensus 81 ~~~~qa~wl~~vl~~L~~~-------------Y~~~~~N~VGHSmGg~~~~~yl~~~~~~~~~P--~l~K~V~Ia~pfng 145 (255)
T PF06028_consen 81 NYKKQAKWLKKVLKYLKKK-------------YHFKKFNLVGHSMGGLSWTYYLENYGNDKNLP--KLNKLVTIAGPFNG 145 (255)
T ss_dssp HHHHHHHHHHHHHHHHHHC-------------C--SEEEEEEETHHHHHHHHHHHHCTTGTTS---EEEEEEEES--TTT
T ss_pred CHHHHHHHHHHHHHHHHHh-------------cCCCEEeEEEECccHHHHHHHHHHhccCCCCc--ccceEEEeccccCc
Confidence 3456777888889999887 45789999999999999987777754 34455 89999999999988
Q ss_pred CCccHHHHHHhhCCCCCCCCCCCCCCChhhh-cc--cCCCC---EEEEEcC------Cccchhh--HHHHHHHHHhcCCC
Q 039671 91 TSPEEDEMWLYMCPTNGGLQDPRLKPPAEDL-AR--LGCER---VLIFVAE------KDFLKPV--AMNYYEDLKKSGWK 156 (195)
Q Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~-~~--~~~pp---~~i~~g~------~D~l~~~--~~~~~~~l~~~~~g 156 (195)
........- ........ ....++....+ .. ..+|+ +|-+.|. .|-.|+. +..+...++.. .
T Consensus 146 ~~~~~~~~~--~~~~~~~g-p~~~~~~y~~l~~~~~~~~p~~i~VLnI~G~~~~g~~sDG~V~~~Ss~sl~~L~~~~--~ 220 (255)
T PF06028_consen 146 ILGMNDDQN--QNDLNKNG-PKSMTPMYQDLLKNRRKNFPKNIQVLNIYGDLEDGSNSDGIVPNASSLSLRYLLKNR--A 220 (255)
T ss_dssp TTCCSC-TT--TT-CSTT--BSS--HHHHHHHHTHGGGSTTT-EEEEEEEESBTTCSBTSSSBHHHHCTHHHHCTTT--S
T ss_pred cccccccch--hhhhcccC-CcccCHHHHHHHHHHHhhCCCCeEEEEEecccCCCCCCCeEEeHHHHHHHHHHhhcc--c
Confidence 543100000 00000000 11222211111 11 12333 8899998 5766654 55555556666 5
Q ss_pred ccEEEEEecC--CCccccccCCCchHHHHHHHHHHHHH
Q 039671 157 GTVELVETHG--EGHSFYFDNLKCEKAVELINKFVSFI 192 (195)
Q Consensus 157 ~~~~~~~~~g--~~H~f~~~~~~~~~~~~~~~~~~~fl 192 (195)
..++-.++.| +.|.-. .+..++.+.+.+||
T Consensus 221 ~~Y~e~~v~G~~a~HS~L------heN~~V~~~I~~FL 252 (255)
T PF06028_consen 221 KSYQEKTVTGKDAQHSQL------HENPQVDKLIIQFL 252 (255)
T ss_dssp SEEEEEEEESGGGSCCGG------GCCHHHHHHHHHHH
T ss_pred CceEEEEEECCCCccccC------CCCHHHHHHHHHHh
Confidence 6788888876 478222 33467778888887
No 120
>KOG2382 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=98.34 E-value=1.5e-05 Score=61.83 Aligned_cols=59 Identities=25% Similarity=0.339 Sum_probs=40.6
Q ss_pred CEEEEEcCCccchhhHHHHHHHHHhcCCCccEEEEEecCCCccccccCCCchHHHHHHHHHHHHHHhC
Q 039671 128 RVLIFVAEKDFLKPVAMNYYEDLKKSGWKGTVELVETHGEGHSFYFDNLKCEKAVELINKFVSFITQL 195 (195)
Q Consensus 128 p~~i~~g~~D~l~~~~~~~~~~l~~~~~g~~~~~~~~~g~~H~f~~~~~~~~~~~~~~~~~~~fl~~~ 195 (195)
|+++++|..+..++... ...+++. -..++++.+++++| |... +.-++.++.+.+|+.++
T Consensus 255 pvlfi~g~~S~fv~~~~--~~~~~~~--fp~~e~~~ld~aGH-wVh~----E~P~~~~~~i~~Fl~~~ 313 (315)
T KOG2382|consen 255 PVLFIKGLQSKFVPDEH--YPRMEKI--FPNVEVHELDEAGH-WVHL----EKPEEFIESISEFLEEP 313 (315)
T ss_pred ceeEEecCCCCCcChhH--HHHHHHh--ccchheeecccCCc-eeec----CCHHHHHHHHHHHhccc
Confidence 79999999998775321 1333333 34569999999999 4333 23368888888888763
No 121
>PF06057 VirJ: Bacterial virulence protein (VirJ); InterPro: IPR010333 This entry contains several bacterial VirJ virulence proteins. VirJ is thought to be involved in the type IV secretion system. It is thought that the substrate proteins localised to the periplasm may associate with the pilus in a manner that is mediated by VirJ, and suggest a two-step process for type IV secretion in Agrobacterium [].
Probab=98.33 E-value=4.7e-06 Score=60.11 Aligned_cols=139 Identities=19% Similarity=0.201 Sum_probs=82.8
Q ss_pred HHHHHHHHHHHHHhccCCCCCCCCCCCCCCCceEEeeccchHHHHHHHHHHhccCCCCCCceeEEEeeccccCCCCccHH
Q 039671 17 YEDSWAALNWVASHAGGNGPEPWLNDHADFGRVFIGGGSAGGNIAHTLAFQVGSIGLPRVKLVGVIMVHPFFGGTSPEED 96 (195)
Q Consensus 17 ~~D~~~a~~~l~~~~~~~~~~~~~~~~~d~~~i~l~G~S~Gg~la~~~a~~~~~~~~~~~~~~~~i~~~p~~~~~~~~~~ 96 (195)
-.|+...+++..+. ...++++|+|.|.|+-+.-.+.-+.+..-.. +++.+++++|-....-.+.-
T Consensus 51 a~Dl~~~i~~y~~~-------------w~~~~vvLiGYSFGADvlP~~~nrLp~~~r~--~v~~v~Ll~p~~~~dFeihv 115 (192)
T PF06057_consen 51 AADLARIIRHYRAR-------------WGRKRVVLIGYSFGADVLPFIYNRLPAALRA--RVAQVVLLSPSTTADFEIHV 115 (192)
T ss_pred HHHHHHHHHHHHHH-------------hCCceEEEEeecCCchhHHHHHhhCCHHHHh--heeEEEEeccCCcceEEEEh
Confidence 46777777777666 4578999999999998877777666543322 88999998887554322211
Q ss_pred HHHHhhCCCCCCCCCCCCCCChhhhcccCCCCEEEEEcCCcc--chhhHHHHHHHHHhcCCCccEEEEEecCCCcccccc
Q 039671 97 EMWLYMCPTNGGLQDPRLKPPAEDLARLGCERVLIFVAEKDF--LKPVAMNYYEDLKKSGWKGTVELVETHGEGHSFYFD 174 (195)
Q Consensus 97 ~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~pp~~i~~g~~D~--l~~~~~~~~~~l~~~~~g~~~~~~~~~g~~H~f~~~ 174 (195)
..|-.. ..........| .++.++-.|++.++|++|. +++ .+++. .++....||+-| |+.
T Consensus 116 ~~wlg~---~~~~~~~~~~p---ei~~l~~~~v~CiyG~~E~d~~cp-------~l~~~----~~~~i~lpGgHH-fd~- 176 (192)
T PF06057_consen 116 SGWLGM---GGDDAAYPVIP---EIAKLPPAPVQCIYGEDEDDSLCP-------SLRQP----GVEVIALPGGHH-FDG- 176 (192)
T ss_pred hhhcCC---CCCcccCCchH---HHHhCCCCeEEEEEcCCCCCCcCc-------cccCC----CcEEEEcCCCcC-CCC-
Confidence 112111 11111012222 2333333479999998763 333 23333 568889999544 642
Q ss_pred CCCchHHHHHHHHHHHHHHh
Q 039671 175 NLKCEKAVELINKFVSFITQ 194 (195)
Q Consensus 175 ~~~~~~~~~~~~~~~~fl~~ 194 (195)
.+....+.+++-+++
T Consensus 177 -----dy~~La~~Il~~l~~ 191 (192)
T PF06057_consen 177 -----DYDALAKRILDALKA 191 (192)
T ss_pred -----CHHHHHHHHHHHHhc
Confidence 345666677766653
No 122
>TIGR01839 PHA_synth_II poly(R)-hydroxyalkanoic acid synthase, class II. This model represents the class II subfamily of poly(R)-hydroxyalkanoate synthases, which polymerizes hydroxyacyl-CoAs, typically with six to fourteen carbons in the hydroxyacyl backbone into aliphatic esters termed poly(R)-hydroxyalkanoic acids. These polymers accumulate as carbon and energy storage inclusions in many species and can amount to 90 percent of the dry weight of cell.
Probab=98.32 E-value=1.2e-05 Score=67.08 Aligned_cols=66 Identities=15% Similarity=0.164 Sum_probs=46.0
Q ss_pred CCCchHHHHHHHHHHHHHhccCCCCCCCCCCCCCCCceEEeeccchHHHHHHHHHHhccCCCCCCceeEEEeeccccCCC
Q 039671 12 PIPACYEDSWAALNWVASHAGGNGPEPWLNDHADFGRVFIGGGSAGGNIAHTLAFQVGSIGLPRVKLVGVIMVHPFFGGT 91 (195)
Q Consensus 12 ~~p~~~~D~~~a~~~l~~~~~~~~~~~~~~~~~d~~~i~l~G~S~Gg~la~~~a~~~~~~~~~~~~~~~~i~~~p~~~~~ 91 (195)
++.+-++.+.+|++.+++. ...++|.++|+|+||.+++.++......+. ..+++.++++...+|..
T Consensus 266 ~ldDYv~~i~~Ald~V~~~-------------tG~~~vnl~GyC~GGtl~a~~~a~~aA~~~-~~~V~sltllatplDf~ 331 (560)
T TIGR01839 266 GLSTYVDALKEAVDAVRAI-------------TGSRDLNLLGACAGGLTCAALVGHLQALGQ-LRKVNSLTYLVSLLDST 331 (560)
T ss_pred CHHHHHHHHHHHHHHHHHh-------------cCCCCeeEEEECcchHHHHHHHHHHHhcCC-CCceeeEEeeecccccC
Confidence 3455667778888888776 567899999999999998853222211110 12699999888888765
No 123
>COG3571 Predicted hydrolase of the alpha/beta-hydrolase fold [General function prediction only]
Probab=98.32 E-value=7.1e-05 Score=52.42 Aligned_cols=117 Identities=21% Similarity=0.264 Sum_probs=71.8
Q ss_pred CCCCceEEeeccchHHHHHHHHHHhccCCCCCCceeEEEee-ccccCCCCccHHHHHHhhCCCCCCCCCCCCCCChhhhc
Q 039671 44 ADFGRVFIGGGSAGGNIAHTLAFQVGSIGLPRVKLVGVIMV-HPFFGGTSPEEDEMWLYMCPTNGGLQDPRLKPPAEDLA 122 (195)
Q Consensus 44 ~d~~~i~l~G~S~Gg~la~~~a~~~~~~~~~~~~~~~~i~~-~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~ 122 (195)
.+..++++.|+||||-++..++-.... .+.+++++ ||+...... . .. ..+-+.
T Consensus 86 l~~gpLi~GGkSmGGR~aSmvade~~A------~i~~L~clgYPfhppGKP-------------e-----~~--Rt~HL~ 139 (213)
T COG3571 86 LAEGPLIIGGKSMGGRVASMVADELQA------PIDGLVCLGYPFHPPGKP-------------E-----QL--RTEHLT 139 (213)
T ss_pred ccCCceeeccccccchHHHHHHHhhcC------CcceEEEecCccCCCCCc-------------c-----cc--hhhhcc
Confidence 566789999999999999988877654 57777665 465444221 0 00 112333
Q ss_pred ccCCCCEEEEEcCCccch--hhHHHHHHHHHhcCCCccEEEEEecCCCccccccC---CC-chHH-HHHHHHHHHHHHh
Q 039671 123 RLGCERVLIFVAEKDFLK--PVAMNYYEDLKKSGWKGTVELVETHGEGHSFYFDN---LK-CEKA-VELINKFVSFITQ 194 (195)
Q Consensus 123 ~~~~pp~~i~~g~~D~l~--~~~~~~~~~l~~~~~g~~~~~~~~~g~~H~f~~~~---~~-~~~~-~~~~~~~~~fl~~ 194 (195)
++++ |++|++|+.|.+- ++. +...- ..+.++++.+++.|+.--.. .. .... ...-+++..|.++
T Consensus 140 gl~t-Ptli~qGtrD~fGtr~~V---a~y~l----s~~iev~wl~~adHDLkp~k~vsgls~~~hL~~~A~~va~~~~~ 210 (213)
T COG3571 140 GLKT-PTLITQGTRDEFGTRDEV---AGYAL----SDPIEVVWLEDADHDLKPRKLVSGLSTADHLKTLAEQVAGWARR 210 (213)
T ss_pred CCCC-CeEEeecccccccCHHHH---Hhhhc----CCceEEEEeccCccccccccccccccHHHHHHHHHHHHHHHHhh
Confidence 4444 5999999999875 332 22221 24789999999999663221 11 1122 3333566677765
No 124
>PRK07868 acyl-CoA synthetase; Validated
Probab=98.30 E-value=1.1e-05 Score=72.90 Aligned_cols=65 Identities=20% Similarity=0.185 Sum_probs=40.6
Q ss_pred hcccCCCCEEEEEcCCccchhh--HHHHHHHHHhcCCCccEEE-EEecCCCccccccCCCchHHHHHHHHHHHHHHh
Q 039671 121 LARLGCERVLIFVAEKDFLKPV--AMNYYEDLKKSGWKGTVEL-VETHGEGHSFYFDNLKCEKAVELINKFVSFITQ 194 (195)
Q Consensus 121 ~~~~~~pp~~i~~g~~D~l~~~--~~~~~~~l~~~~~g~~~~~-~~~~g~~H~f~~~~~~~~~~~~~~~~~~~fl~~ 194 (195)
+..+++ |+++++|+.|.+++. +..+.+.+. ..++ .++++++|.-..... ...++....+.+||++
T Consensus 293 L~~i~~-P~L~i~G~~D~ivp~~~~~~l~~~i~------~a~~~~~~~~~GH~g~~~g~--~a~~~~wp~i~~wl~~ 360 (994)
T PRK07868 293 LADITC-PVLAFVGEVDDIGQPASVRGIRRAAP------NAEVYESLIRAGHFGLVVGS--RAAQQTWPTVADWVKW 360 (994)
T ss_pred hhhCCC-CEEEEEeCCCCCCCHHHHHHHHHhCC------CCeEEEEeCCCCCEeeeech--hhhhhhChHHHHHHHH
Confidence 334444 599999999998753 444444332 2355 567888994333322 2335667788889875
No 125
>cd00707 Pancreat_lipase_like Pancreatic lipase-like enzymes. Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=98.26 E-value=1.6e-06 Score=67.05 Aligned_cols=72 Identities=18% Similarity=0.207 Sum_probs=51.3
Q ss_pred CCcCCCCCCCCCCch-------HHHHHHHHHHHHHhccCCCCCCCCCCCCCCCceEEeeccchHHHHHHHHHHhccCCCC
Q 039671 2 SVEYGLFPDRPIPAC-------YEDSWAALNWVASHAGGNGPEPWLNDHADFGRVFIGGGSAGGNIAHTLAFQVGSIGLP 74 (195)
Q Consensus 2 ~~~Yrlap~~~~p~~-------~~D~~~a~~~l~~~~~~~~~~~~~~~~~d~~~i~l~G~S~Gg~la~~~a~~~~~~~~~ 74 (195)
.+||+-.....++.. .+++...+++|.+... .+.++|.|+|||+||++|..++.+.++
T Consensus 71 ~vD~~~~~~~~y~~a~~~~~~v~~~la~~l~~L~~~~g-----------~~~~~i~lIGhSlGa~vAg~~a~~~~~---- 135 (275)
T cd00707 71 VVDWGRGANPNYPQAVNNTRVVGAELAKFLDFLVDNTG-----------LSLENVHLIGHSLGAHVAGFAGKRLNG---- 135 (275)
T ss_pred EEECccccccChHHHHHhHHHHHHHHHHHHHHHHHhcC-----------CChHHEEEEEecHHHHHHHHHHHHhcC----
Confidence 355655433334332 3566777777776532 567899999999999999999988754
Q ss_pred CCceeEEEeeccccCC
Q 039671 75 RVKLVGVIMVHPFFGG 90 (195)
Q Consensus 75 ~~~~~~~i~~~p~~~~ 90 (195)
+++.++++.|....
T Consensus 136 --~v~~iv~LDPa~p~ 149 (275)
T cd00707 136 --KLGRITGLDPAGPL 149 (275)
T ss_pred --ccceeEEecCCccc
Confidence 78899998876543
No 126
>PF03403 PAF-AH_p_II: Platelet-activating factor acetylhydrolase, isoform II; PDB: 3F98_B 3F97_B 3D59_A 3F96_A 3D5E_B 3F9C_A.
Probab=98.26 E-value=9.6e-06 Score=65.47 Aligned_cols=91 Identities=18% Similarity=0.222 Sum_probs=49.9
Q ss_pred CCCCCCceEEeeccchHHHHHHHHHHhccCCCCCCceeEEEeeccccCCCCccHHHHHHhhCCCCCCCCCCCCCCChhhh
Q 039671 42 DHADFGRVFIGGGSAGGNIAHTLAFQVGSIGLPRVKLVGVIMVHPFFGGTSPEEDEMWLYMCPTNGGLQDPRLKPPAEDL 121 (195)
Q Consensus 42 ~~~d~~~i~l~G~S~Gg~la~~~a~~~~~~~~~~~~~~~~i~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~ 121 (195)
..+|.++|+++|||.||..|+.++.+.. +++++|++.||+-+... +..
T Consensus 223 grlD~~~i~~~GHSFGGATa~~~l~~d~-------r~~~~I~LD~W~~Pl~~-------------------------~~~ 270 (379)
T PF03403_consen 223 GRLDLSRIGLAGHSFGGATALQALRQDT-------RFKAGILLDPWMFPLGD-------------------------EIY 270 (379)
T ss_dssp T-EEEEEEEEEEETHHHHHHHHHHHH-T-------T--EEEEES---TTS-G-------------------------GGG
T ss_pred hhcchhheeeeecCchHHHHHHHHhhcc-------CcceEEEeCCcccCCCc-------------------------ccc
Confidence 4478899999999999999998777753 89999999999754111 011
Q ss_pred cccCCCCEEEEEcCCccchh-hHHHHHHHHHhcCCCccEEEEEecCCCc
Q 039671 122 ARLGCERVLIFVAEKDFLKP-VAMNYYEDLKKSGWKGTVELVETHGEGH 169 (195)
Q Consensus 122 ~~~~~pp~~i~~g~~D~l~~-~~~~~~~~l~~~~~g~~~~~~~~~g~~H 169 (195)
..++. |+++++++. .... +...+. ++... +....+..+.|..|
T Consensus 271 ~~i~~-P~L~InSe~-f~~~~~~~~~~-~~~~~--~~~~~~~ti~gt~H 314 (379)
T PF03403_consen 271 SKIPQ-PLLFINSES-FQWWENIFRMK-KVISN--NKESRMLTIKGTAH 314 (379)
T ss_dssp GG--S--EEEEEETT-T--HHHHHHHH-TT--T--TS-EEEEEETT--G
T ss_pred cCCCC-CEEEEECcc-cCChhhHHHHH-HHhcc--CCCcEEEEECCCcC
Confidence 12222 699988775 2222 222222 23333 35667888999999
No 127
>PF10230 DUF2305: Uncharacterised conserved protein (DUF2305); InterPro: IPR019363 This entry contains proteins that have no known function.
Probab=98.24 E-value=4.2e-05 Score=58.90 Aligned_cols=64 Identities=14% Similarity=0.201 Sum_probs=45.0
Q ss_pred CCchHHHHHHHHHHHHHhccCCCCCCCCCCCCCCCceEEeeccchHHHHHHHHHHhccCCCCCCceeEEEeeccccCC
Q 039671 13 IPACYEDSWAALNWVASHAGGNGPEPWLNDHADFGRVFIGGGSAGGNIAHTLAFQVGSIGLPRVKLVGVIMVHPFFGG 90 (195)
Q Consensus 13 ~p~~~~D~~~a~~~l~~~~~~~~~~~~~~~~~d~~~i~l~G~S~Gg~la~~~a~~~~~~~~~~~~~~~~i~~~p~~~~ 90 (195)
+.+|++-..+.++.+..... ....+++|+|||.|+++++.+..+..+. ..++++++++.|.+..
T Consensus 61 L~~QI~hk~~~i~~~~~~~~-----------~~~~~liLiGHSIGayi~levl~r~~~~---~~~V~~~~lLfPTi~~ 124 (266)
T PF10230_consen 61 LQDQIEHKIDFIKELIPQKN-----------KPNVKLILIGHSIGAYIALEVLKRLPDL---KFRVKKVILLFPTIED 124 (266)
T ss_pred HHHHHHHHHHHHHHHhhhhc-----------CCCCcEEEEeCcHHHHHHHHHHHhcccc---CCceeEEEEeCCcccc
Confidence 44555555555555544321 1457899999999999999999998721 2378999999997643
No 128
>COG3545 Predicted esterase of the alpha/beta hydrolase fold [General function prediction only]
Probab=98.22 E-value=7.4e-05 Score=53.03 Aligned_cols=96 Identities=17% Similarity=0.151 Sum_probs=61.7
Q ss_pred CCceEEeeccchHHHHHHHHHHhccCCCCCCceeEEEeeccccCCCCccHHHHHHhhCCCCCCCCCCCCCCChhhhcccC
Q 039671 46 FGRVFIGGGSAGGNIAHTLAFQVGSIGLPRVKLVGVIMVHPFFGGTSPEEDEMWLYMCPTNGGLQDPRLKPPAEDLARLG 125 (195)
Q Consensus 46 ~~~i~l~G~S~Gg~la~~~a~~~~~~~~~~~~~~~~i~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~ 125 (195)
.+.++|++||.|+-.++.++.+... +++|+++++|.--..+..... ....+.| .....+.
T Consensus 58 ~~~~vlVAHSLGc~~v~h~~~~~~~------~V~GalLVAppd~~~~~~~~~------------~~~tf~~--~p~~~lp 117 (181)
T COG3545 58 EGPVVLVAHSLGCATVAHWAEHIQR------QVAGALLVAPPDVSRPEIRPK------------HLMTFDP--IPREPLP 117 (181)
T ss_pred CCCeEEEEecccHHHHHHHHHhhhh------ccceEEEecCCCccccccchh------------hccccCC--CccccCC
Confidence 4559999999999999988887754 799999999985443221000 1111122 1122223
Q ss_pred CCCEEEEEcCCccchhh--HHHHHHHHHhcCCCccEEEEEecCCCc
Q 039671 126 CERVLIFVAEKDFLKPV--AMNYYEDLKKSGWKGTVELVETHGEGH 169 (195)
Q Consensus 126 ~pp~~i~~g~~D~l~~~--~~~~~~~l~~~~~g~~~~~~~~~g~~H 169 (195)
+ |.+++.+.+|+.++. ++.+++.. ...++....+||
T Consensus 118 f-ps~vvaSrnDp~~~~~~a~~~a~~w-------gs~lv~~g~~GH 155 (181)
T COG3545 118 F-PSVVVASRNDPYVSYEHAEDLANAW-------GSALVDVGEGGH 155 (181)
T ss_pred C-ceeEEEecCCCCCCHHHHHHHHHhc-------cHhheecccccc
Confidence 3 499999999998853 44444433 335777777899
No 129
>KOG2564 consensus Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold [General function prediction only]
Probab=98.22 E-value=5.1e-06 Score=63.03 Aligned_cols=54 Identities=22% Similarity=0.268 Sum_probs=38.8
Q ss_pred CCchHHHHHHHHHHHHHhccCCCCCCCCCCCCCCCceEEeeccchHHHHHHHHHHhccCCCCCCceeEEEeec
Q 039671 13 IPACYEDSWAALNWVASHAGGNGPEPWLNDHADFGRVFIGGGSAGGNIAHTLAFQVGSIGLPRVKLVGVIMVH 85 (195)
Q Consensus 13 ~p~~~~D~~~a~~~l~~~~~~~~~~~~~~~~~d~~~i~l~G~S~Gg~la~~~a~~~~~~~~~~~~~~~~i~~~ 85 (195)
...+..|+.+.++++-.. .+.+|+|+||||||.+|++.+....- | .+.|++++.
T Consensus 126 ~eT~~KD~~~~i~~~fge--------------~~~~iilVGHSmGGaIav~~a~~k~l---p--sl~Gl~viD 179 (343)
T KOG2564|consen 126 LETMSKDFGAVIKELFGE--------------LPPQIILVGHSMGGAIAVHTAASKTL---P--SLAGLVVID 179 (343)
T ss_pred HHHHHHHHHHHHHHHhcc--------------CCCceEEEeccccchhhhhhhhhhhc---h--hhhceEEEE
Confidence 346778888888877654 34679999999999999877766432 1 466666553
No 130
>PF07224 Chlorophyllase: Chlorophyllase; InterPro: IPR010821 This family consists of several chlorophyllase proteins (3.1.1.14 from EC). Chlorophyllase (Chlase) is the first enzyme involved in chlorophyll degradation and catalyses the hydrolysis of the ester bond to yield chlorophyllide and phytol [, , ].; GO: 0047746 chlorophyllase activity, 0015996 chlorophyll catabolic process
Probab=98.18 E-value=3.5e-05 Score=58.09 Aligned_cols=133 Identities=20% Similarity=0.222 Sum_probs=81.0
Q ss_pred CCchHHHHHHHHHHHHHhccCCCCCCCCCCCCCCCceEEeeccchHHHHHHHHHHhccCCCCCCceeEEEeeccccCCCC
Q 039671 13 IPACYEDSWAALNWVASHAGGNGPEPWLNDHADFGRVFIGGGSAGGNIAHTLAFQVGSIGLPRVKLVGVIMVHPFFGGTS 92 (195)
Q Consensus 13 ~p~~~~D~~~a~~~l~~~~~~~~~~~~~~~~~d~~~i~l~G~S~Gg~la~~~a~~~~~~~~~~~~~~~~i~~~p~~~~~~ 92 (195)
-++.++++...++||.+.....-+ .+...+.++++++|||.||..|.++|+... . ..++.++|.+.|+-....
T Consensus 89 ~~~Ei~~aa~V~~WL~~gL~~~Lp---~~V~~nl~klal~GHSrGGktAFAlALg~a-~---~lkfsaLIGiDPV~G~~k 161 (307)
T PF07224_consen 89 GQDEIKSAASVINWLPEGLQHVLP---ENVEANLSKLALSGHSRGGKTAFALALGYA-T---SLKFSALIGIDPVAGTSK 161 (307)
T ss_pred chHHHHHHHHHHHHHHhhhhhhCC---CCcccccceEEEeecCCccHHHHHHHhccc-c---cCchhheecccccCCCCC
Confidence 456778899999999987554322 122367889999999999999999998765 2 347899999999866532
Q ss_pred ccHHHHHHhhCCCCCCCCCCCCCCChhhhcccCCCCEEEEEcCCc-------cch-hhHHHHHHHHHhcCCCccEEEEEe
Q 039671 93 PEEDEMWLYMCPTNGGLQDPRLKPPAEDLARLGCERVLIFVAEKD-------FLK-PVAMNYYEDLKKSGWKGTVELVET 164 (195)
Q Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~pp~~i~~g~~D-------~l~-~~~~~~~~~l~~~~~g~~~~~~~~ 164 (195)
. ....-.-....|..-++. . |++++-++-- +.+ +....-.+..++. +.++-..+.
T Consensus 162 ~-----------~~t~P~iLty~p~SF~l~---i-Pv~VIGtGLg~~~~~~~~~CaP~gvnH~eFf~eC--k~p~~hfV~ 224 (307)
T PF07224_consen 162 G-----------KQTPPPILTYVPQSFDLD---I-PVLVIGTGLGPKRNPLFPPCAPDGVNHEEFFNEC--KPPCAHFVA 224 (307)
T ss_pred C-----------CCCCCCeeecCCcccccC---C-ceEEEecCcCccccCCCCCCCCCCcCHHHHHHhh--cccceeeee
Confidence 1 000001111223112222 2 5888766554 112 2333333444444 456666667
Q ss_pred cCCCc
Q 039671 165 HGEGH 169 (195)
Q Consensus 165 ~g~~H 169 (195)
.+-+|
T Consensus 225 ~dYGH 229 (307)
T PF07224_consen 225 KDYGH 229 (307)
T ss_pred ccccc
Confidence 77788
No 131
>PF00975 Thioesterase: Thioesterase domain; InterPro: IPR001031 Thioesterase domains often occur integrated in or associated with peptide synthetases which are involved in the non-ribosomal synthesis of peptide antibiotics []. Thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates.; GO: 0016788 hydrolase activity, acting on ester bonds, 0009058 biosynthetic process; PDB: 2RON_A 2K2Q_B 3LCR_B 2HFJ_B 1MNQ_A 1MN6_B 1MNA_B 2HFK_B 2H7Y_B 2H7X_A ....
Probab=98.14 E-value=3.7e-05 Score=57.43 Aligned_cols=39 Identities=23% Similarity=0.279 Sum_probs=32.5
Q ss_pred ceEEeeccchHHHHHHHHHHhccCCCCCCceeEEEeeccccC
Q 039671 48 RVFIGGGSAGGNIAHTLAFQVGSIGLPRVKLVGVIMVHPFFG 89 (195)
Q Consensus 48 ~i~l~G~S~Gg~la~~~a~~~~~~~~~~~~~~~~i~~~p~~~ 89 (195)
++.|+|||+||.+|..+|.+....+. .+..++++.++..
T Consensus 67 p~~L~G~S~Gg~lA~E~A~~Le~~G~---~v~~l~liD~~~p 105 (229)
T PF00975_consen 67 PYVLAGWSFGGILAFEMARQLEEAGE---EVSRLILIDSPPP 105 (229)
T ss_dssp SEEEEEETHHHHHHHHHHHHHHHTT----SESEEEEESCSST
T ss_pred CeeehccCccHHHHHHHHHHHHHhhh---ccCceEEecCCCC
Confidence 89999999999999999999877653 5888998885443
No 132
>COG3243 PhaC Poly(3-hydroxyalkanoate) synthetase [Lipid metabolism]
Probab=98.13 E-value=3.4e-05 Score=61.85 Aligned_cols=72 Identities=10% Similarity=0.085 Sum_probs=50.0
Q ss_pred CCcCCCCCCCCCCchH-HHHHHHHHHHHHhccCCCCCCCCCCCCCCCceEEeeccchHHHHHHHHHHhccCCCCCCceeE
Q 039671 2 SVEYGLFPDRPIPACY-EDSWAALNWVASHAGGNGPEPWLNDHADFGRVFIGGGSAGGNIAHTLAFQVGSIGLPRVKLVG 80 (195)
Q Consensus 2 ~~~Yrlap~~~~p~~~-~D~~~a~~~l~~~~~~~~~~~~~~~~~d~~~i~l~G~S~Gg~la~~~a~~~~~~~~~~~~~~~ 80 (195)
+++++.+ +-.+.+-+ +++..+++.+.+. ...++|-++|+|.||+++..++...... +++.
T Consensus 149 nPd~~~~-~~~~edYi~e~l~~aid~v~~i-------------tg~~~InliGyCvGGtl~~~ala~~~~k-----~I~S 209 (445)
T COG3243 149 NPDASLA-AKNLEDYILEGLSEAIDTVKDI-------------TGQKDINLIGYCVGGTLLAAALALMAAK-----RIKS 209 (445)
T ss_pred CchHhhh-hccHHHHHHHHHHHHHHHHHHH-------------hCccccceeeEecchHHHHHHHHhhhhc-----cccc
Confidence 4555555 44555555 8888888888876 4557899999999999988666655442 4777
Q ss_pred EEeeccccCCCC
Q 039671 81 VIMVHPFFGGTS 92 (195)
Q Consensus 81 ~i~~~p~~~~~~ 92 (195)
+.++.-..|+..
T Consensus 210 ~T~lts~~DF~~ 221 (445)
T COG3243 210 LTLLTSPVDFSH 221 (445)
T ss_pred ceeeecchhhcc
Confidence 766665555543
No 133
>KOG1516 consensus Carboxylesterase and related proteins [General function prediction only]
Probab=98.12 E-value=1.5e-06 Score=73.54 Aligned_cols=75 Identities=27% Similarity=0.260 Sum_probs=57.5
Q ss_pred CCCcCCCC---------CCCCCCchHHHHHHHHHHHHHhccCCCCCCCCCCCCCCCceEEeeccchHHHHHHHHHHhccC
Q 039671 1 VSVEYGLF---------PDRPIPACYEDSWAALNWVASHAGGNGPEPWLNDHADFGRVFIGGGSAGGNIAHTLAFQVGSI 71 (195)
Q Consensus 1 ~~~~Yrla---------p~~~~p~~~~D~~~a~~~l~~~~~~~~~~~~~~~~~d~~~i~l~G~S~Gg~la~~~a~~~~~~ 71 (195)
|.++|||- ...+-...+.|...|++|++++....| .|+++|.|+|||+||..+..+.......
T Consensus 148 Vt~~YRLG~lGF~st~d~~~~gN~gl~Dq~~AL~wv~~~I~~FG--------Gdp~~vTl~G~saGa~~v~~l~~Sp~s~ 219 (545)
T KOG1516|consen 148 VTINYRLGPLGFLSTGDSAAPGNLGLFDQLLALRWVKDNIPSFG--------GDPKNVTLFGHSAGAASVSLLTLSPHSR 219 (545)
T ss_pred EEecccceeceeeecCCCCCCCcccHHHHHHHHHHHHHHHHhcC--------CCCCeEEEEeechhHHHHHHHhcCHhhH
Confidence 46899983 223456678899999999999999998 9999999999999999988777654332
Q ss_pred CCCCCceeEEEeeccc
Q 039671 72 GLPRVKLVGVIMVHPF 87 (195)
Q Consensus 72 ~~~~~~~~~~i~~~p~ 87 (195)
+ .++.+|..|+.
T Consensus 220 ~----LF~~aI~~SG~ 231 (545)
T KOG1516|consen 220 G----LFHKAISMSGN 231 (545)
T ss_pred H----HHHHHHhhccc
Confidence 2 34555555543
No 134
>COG3509 LpqC Poly(3-hydroxybutyrate) depolymerase [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=98.01 E-value=0.00015 Score=55.70 Aligned_cols=59 Identities=25% Similarity=0.291 Sum_probs=43.2
Q ss_pred hHHHHHHHHHHHHHhccCCCCCCCCCCCCCCCceEEeeccchHHHHHHHHHHhccCCCCCCceeEEEeecccc
Q 039671 16 CYEDSWAALNWVASHAGGNGPEPWLNDHADFGRVFIGGGSAGGNIAHTLAFQVGSIGLPRVKLVGVIMVHPFF 88 (195)
Q Consensus 16 ~~~D~~~a~~~l~~~~~~~~~~~~~~~~~d~~~i~l~G~S~Gg~la~~~a~~~~~~~~~~~~~~~~i~~~p~~ 88 (195)
-++|+.-..+-+.+...+++ +|++||+|.|-|.||.|+..++...++ .+.++..+++..
T Consensus 121 g~ddVgflr~lva~l~~~~g--------idp~RVyvtGlS~GG~Ma~~lac~~p~------~faa~A~VAg~~ 179 (312)
T COG3509 121 GVDDVGFLRALVAKLVNEYG--------IDPARVYVTGLSNGGRMANRLACEYPD------IFAAIAPVAGLL 179 (312)
T ss_pred CccHHHHHHHHHHHHHHhcC--------cCcceEEEEeeCcHHHHHHHHHhcCcc------cccceeeeeccc
Confidence 34454444444444444556 999999999999999999999999865 677777777665
No 135
>TIGR01849 PHB_depoly_PhaZ polyhydroxyalkanoate depolymerase, intracellular. This model represents an intracellular depolymerase for polyhydroxyalkanoate (PHA), a carbon and energy storing polyester that accumulates in granules in many bacterial species when carbon sources are abundant but other nutrients are limiting. This family is named for PHAs generally, rather than polyhydroxybutyrate (PHB) specificially as in Ralstonia eutropha H16, to avoid overcalling chemical specificity in other species. Note that this family lacks the classic GXSXG lipase motif and instead shows weak similarity to some
Probab=98.00 E-value=0.00026 Score=57.40 Aligned_cols=65 Identities=14% Similarity=0.030 Sum_probs=41.5
Q ss_pred CEEEEEcCCccchhh--HHHHHHHHHhcCCCccEEEEEecCCCccccccCCCchHHHHHHHHHHHHHHhC
Q 039671 128 RVLIFVAEKDFLKPV--AMNYYEDLKKSGWKGTVELVETHGEGHSFYFDNLKCEKAVELINKFVSFITQL 195 (195)
Q Consensus 128 p~~i~~g~~D~l~~~--~~~~~~~l~~~~~g~~~~~~~~~g~~H~f~~~~~~~~~~~~~~~~~~~fl~~~ 195 (195)
|+|.+.|+.|.+++. +..+.+.....+ ....+.++.++++| +-.+.+. ...++....+.+||.++
T Consensus 340 pll~V~ge~D~I~p~~qt~aa~~l~~~~~-s~~k~~~~~~~~GH-~Gvf~G~-r~~~~i~P~i~~wl~~~ 406 (406)
T TIGR01849 340 ALLTVEGENDDISGLGQTKAALRLCTGIP-EDMKRHHLQPGVGH-YGVFSGS-RFREEIYPLVREFIRRN 406 (406)
T ss_pred ceEEEeccCCCcCCHHHhHHHHHHhhcCC-hhhceEeecCCCCe-EEEeeCh-hhhhhhchHHHHHHHhC
Confidence 599999999999854 444444432332 23456777778899 4333332 22356668899999864
No 136
>KOG4389 consensus Acetylcholinesterase/Butyrylcholinesterase [Signal transduction mechanisms]
Probab=97.94 E-value=3.2e-06 Score=68.59 Aligned_cols=78 Identities=27% Similarity=0.349 Sum_probs=58.5
Q ss_pred CCCcCCC----------CCCCCCCchHHHHHHHHHHHHHhccCCCCCCCCCCCCCCCceEEeeccchHHHHHHHHHHhcc
Q 039671 1 VSVEYGL----------FPDRPIPACYEDSWAALNWVASHAGGNGPEPWLNDHADFGRVFIGGGSAGGNIAHTLAFQVGS 70 (195)
Q Consensus 1 ~~~~Yrl----------ap~~~~p~~~~D~~~a~~~l~~~~~~~~~~~~~~~~~d~~~i~l~G~S~Gg~la~~~a~~~~~ 70 (195)
|++|||+ .|+++-.-.+-|-+-|++|++++...+| .|+++|.|.|.|||+.-+..=...-.+
T Consensus 170 Vs~NYRvG~FGFL~l~~~~eaPGNmGl~DQqLAl~WV~~Ni~aFG--------Gnp~~vTLFGESAGaASv~aHLlsP~S 241 (601)
T KOG4389|consen 170 VSMNYRVGAFGFLYLPGHPEAPGNMGLLDQQLALQWVQENIAAFG--------GNPSRVTLFGESAGAASVVAHLLSPGS 241 (601)
T ss_pred EEeeeeeccceEEecCCCCCCCCccchHHHHHHHHHHHHhHHHhC--------CCcceEEEeccccchhhhhheecCCCc
Confidence 4789996 4677777889999999999999999999 999999999999998433221122112
Q ss_pred CCCCCCceeEEEeeccccCC
Q 039671 71 IGLPRVKLVGVIMVHPFFGG 90 (195)
Q Consensus 71 ~~~~~~~~~~~i~~~p~~~~ 90 (195)
.+ .++..|+.||.++.
T Consensus 242 ~g----lF~raIlQSGS~~~ 257 (601)
T KOG4389|consen 242 RG----LFHRAILQSGSLNN 257 (601)
T ss_pred hh----hHHHHHhhcCCCCC
Confidence 22 56777888877654
No 137
>TIGR03230 lipo_lipase lipoprotein lipase. Members of this protein family are lipoprotein lipase (EC 3.1.1.34), a eukaryotic triacylglycerol lipase active in plasma and similar to pancreatic and hepatic triacylglycerol lipases (EC 3.1.1.3). It is also called clearing factor. It cleaves chylomicron and VLDL triacylglycerols; it also has phospholipase A-1 activity.
Probab=97.94 E-value=3.5e-05 Score=63.10 Aligned_cols=55 Identities=18% Similarity=0.180 Sum_probs=42.9
Q ss_pred HHHHHHHHHHHHHhccCCCCCCCCCCCCCCCceEEeeccchHHHHHHHHHHhccCCCCCCceeEEEeecccc
Q 039671 17 YEDSWAALNWVASHAGGNGPEPWLNDHADFGRVFIGGGSAGGNIAHTLAFQVGSIGLPRVKLVGVIMVHPFF 88 (195)
Q Consensus 17 ~~D~~~a~~~l~~~~~~~~~~~~~~~~~d~~~i~l~G~S~Gg~la~~~a~~~~~~~~~~~~~~~~i~~~p~~ 88 (195)
-+++.+.+++|.+... .+.+++.|+|||+||++|..++...+. ++.+++++.|..
T Consensus 100 g~~la~lI~~L~~~~g-----------l~l~~VhLIGHSLGAhIAg~ag~~~p~------rV~rItgLDPAg 154 (442)
T TIGR03230 100 GKDVAKFVNWMQEEFN-----------YPWDNVHLLGYSLGAHVAGIAGSLTKH------KVNRITGLDPAG 154 (442)
T ss_pred HHHHHHHHHHHHHhhC-----------CCCCcEEEEEECHHHHHHHHHHHhCCc------ceeEEEEEcCCC
Confidence 3567777777766532 567899999999999999998877643 788898888753
No 138
>PRK05855 short chain dehydrogenase; Validated
Probab=97.90 E-value=0.00028 Score=59.86 Aligned_cols=57 Identities=19% Similarity=0.194 Sum_probs=33.7
Q ss_pred CEEEEEcCCccchhhHHHHHHHHHhcCCCccEEEEEecCCCccccccCCCchHHHHHHHHHHHHHHh
Q 039671 128 RVLIFVAEKDFLKPVAMNYYEDLKKSGWKGTVELVETHGEGHSFYFDNLKCEKAVELINKFVSFITQ 194 (195)
Q Consensus 128 p~~i~~g~~D~l~~~~~~~~~~l~~~~~g~~~~~~~~~g~~H~f~~~~~~~~~~~~~~~~~~~fl~~ 194 (195)
|+++++|+.|.+++.... +.+.+. -...+++++++ +|..... ....+.+.+.+|+.+
T Consensus 235 P~lii~G~~D~~v~~~~~--~~~~~~--~~~~~~~~~~~-gH~~~~e-----~p~~~~~~i~~fl~~ 291 (582)
T PRK05855 235 PVQLIVPTGDPYVRPALY--DDLSRW--VPRLWRREIKA-GHWLPMS-----HPQVLAAAVAEFVDA 291 (582)
T ss_pred ceEEEEeCCCcccCHHHh--cccccc--CCcceEEEccC-CCcchhh-----ChhHHHHHHHHHHHh
Confidence 699999999998864211 233333 12446777775 8944332 224555666666653
No 139
>KOG3847 consensus Phospholipase A2 (platelet-activating factor acetylhydrolase in humans) [Lipid transport and metabolism]
Probab=97.89 E-value=0.0001 Score=56.97 Aligned_cols=91 Identities=12% Similarity=0.103 Sum_probs=59.0
Q ss_pred CCCCCceEEeeccchHHHHHHHHHHhccCCCCCCceeEEEeeccccCCCCccHHHHHHhhCCCCCCCCCCCCCCChhhhc
Q 039671 43 HADFGRVFIGGGSAGGNIAHTLAFQVGSIGLPRVKLVGVIMVHPFFGGTSPEEDEMWLYMCPTNGGLQDPRLKPPAEDLA 122 (195)
Q Consensus 43 ~~d~~~i~l~G~S~Gg~la~~~a~~~~~~~~~~~~~~~~i~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~ 122 (195)
-+|.++++|+|||.||..++.....+. ++++.|++..|+-+-+. . ..+..+
T Consensus 237 nl~~s~~aViGHSFGgAT~i~~ss~~t-------~FrcaI~lD~WM~Pl~~--------------~--------~~~~ar 287 (399)
T KOG3847|consen 237 NLDTSQAAVIGHSFGGATSIASSSSHT-------DFRCAIALDAWMFPLDQ--------------L--------QYSQAR 287 (399)
T ss_pred chhhhhhhheeccccchhhhhhhcccc-------ceeeeeeeeeeecccch--------------h--------hhhhcc
Confidence 378889999999999987776665543 79999999998655221 0 011222
Q ss_pred ccCCCCEEEEEcCCccchhhHHHHHHHHHhcCCCccEEEEEecCCCc
Q 039671 123 RLGCERVLIFVAEKDFLKPVAMNYYEDLKKSGWKGTVELVETHGEGH 169 (195)
Q Consensus 123 ~~~~pp~~i~~g~~D~l~~~~~~~~~~l~~~~~g~~~~~~~~~g~~H 169 (195)
. |+++++ ..|.-..++...-++.... +..-.+..+.|.-|
T Consensus 288 q----P~~fin-v~~fQ~~en~~vmKki~~~--n~g~~~it~~GsVH 327 (399)
T KOG3847|consen 288 Q----PTLFIN-VEDFQWNENLLVMKKIESQ--NEGNHVITLDGSVH 327 (399)
T ss_pred C----CeEEEE-cccccchhHHHHHHhhhCC--CccceEEEEcccee
Confidence 2 788888 3343334444443444444 34557888999988
No 140
>PF09752 DUF2048: Uncharacterized conserved protein (DUF2048); InterPro: IPR019149 This family of proteins has no known function.
Probab=97.88 E-value=0.0003 Score=55.50 Aligned_cols=41 Identities=29% Similarity=0.404 Sum_probs=34.1
Q ss_pred chHHHHHHHHHHHHHhccCCCCCCCCCCCCCCCceEEeeccchHHHHHHHHHHhc
Q 039671 15 ACYEDSWAALNWVASHAGGNGPEPWLNDHADFGRVFIGGGSAGGNIAHTLAFQVG 69 (195)
Q Consensus 15 ~~~~D~~~a~~~l~~~~~~~~~~~~~~~~~d~~~i~l~G~S~Gg~la~~~a~~~~ 69 (195)
..+.++...+.|+.++. ..+++|.|-||||++|...+...+
T Consensus 157 ~~i~E~~~Ll~Wl~~~G--------------~~~~g~~G~SmGG~~A~laa~~~p 197 (348)
T PF09752_consen 157 ATILESRALLHWLEREG--------------YGPLGLTGISMGGHMAALAASNWP 197 (348)
T ss_pred HHHHHHHHHHHHHHhcC--------------CCceEEEEechhHhhHHhhhhcCC
Confidence 46788899999999882 248999999999999997777654
No 141
>COG2819 Predicted hydrolase of the alpha/beta superfamily [General function prediction only]
Probab=97.87 E-value=7e-05 Score=56.78 Aligned_cols=101 Identities=17% Similarity=0.130 Sum_probs=65.3
Q ss_pred CCCCceEEeeccchHHHHHHHHHHhccCCCCCCceeEEEeeccccCCCCccHHHHHHhhCCCCCCCCCCCCCCChhhhcc
Q 039671 44 ADFGRVFIGGGSAGGNIAHTLAFQVGSIGLPRVKLVGVIMVHPFFGGTSPEEDEMWLYMCPTNGGLQDPRLKPPAEDLAR 123 (195)
Q Consensus 44 ~d~~~i~l~G~S~Gg~la~~~a~~~~~~~~~~~~~~~~i~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~ 123 (195)
++.++.+|+|||.||.+++....+.++ .+...+++||.+-..... .+ ...... ...++
T Consensus 134 ~~~~~~~i~GhSlGGLfvl~aLL~~p~------~F~~y~~~SPSlWw~n~~-------~l--------~~~~~~-~~~~~ 191 (264)
T COG2819 134 TNSERTAIIGHSLGGLFVLFALLTYPD------CFGRYGLISPSLWWHNEA-------IL--------REIESL-KLLKT 191 (264)
T ss_pred cCcccceeeeecchhHHHHHHHhcCcc------hhceeeeecchhhhCCHH-------Hh--------cccccc-ccCCC
Confidence 889999999999999999998888754 789999999987653320 00 000000 00011
Q ss_pred cCCCCEEEEEcC--Ccc---c-----hhhHHHHHHHHHh-cCCCccEEEEEecCCCccc
Q 039671 124 LGCERVLIFVAE--KDF---L-----KPVAMNYYEDLKK-SGWKGTVELVETHGEGHSF 171 (195)
Q Consensus 124 ~~~pp~~i~~g~--~D~---l-----~~~~~~~~~~l~~-~~~g~~~~~~~~~g~~H~f 171 (195)
. +++|..|. .|. . ..++.+....+++ . |..+.+..+++.+|+-
T Consensus 192 ~---~i~l~iG~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~--g~~~~f~~~~~~~H~~ 245 (264)
T COG2819 192 K---RICLYIGSGELDSSRSIRMAENKQEAAELSSLLEKRT--GARLVFQEEPLEHHGS 245 (264)
T ss_pred c---ceEEEecccccCcchhhhhhhHHHHHHHHHHHHhhcc--CCceEecccccccccc
Confidence 1 34555443 332 2 2345666666777 6 7888999999888843
No 142
>COG4814 Uncharacterized protein with an alpha/beta hydrolase fold [General function prediction only]
Probab=97.78 E-value=0.0003 Score=52.87 Aligned_cols=157 Identities=15% Similarity=0.108 Sum_probs=90.8
Q ss_pred CCCCchHHHHHHHHHHHHHhccCCCCCCCCCCCCCCCceEEeeccchHHHHHHHHHHh-ccCCCCCCceeEEEeeccccC
Q 039671 11 RPIPACYEDSWAALNWVASHAGGNGPEPWLNDHADFGRVFIGGGSAGGNIAHTLAFQV-GSIGLPRVKLVGVIMVHPFFG 89 (195)
Q Consensus 11 ~~~p~~~~D~~~a~~~l~~~~~~~~~~~~~~~~~d~~~i~l~G~S~Gg~la~~~a~~~-~~~~~~~~~~~~~i~~~p~~~ 89 (195)
.+.+.+-.-+..++.+|.++ .+..++=.+||||||.-..++.... .+..+| .++..+++.+.++
T Consensus 113 ~s~~~~s~wlk~~msyL~~~-------------Y~i~k~n~VGhSmGg~~~~~Y~~~yg~dks~P--~lnK~V~l~gpfN 177 (288)
T COG4814 113 ASGLDQSKWLKKAMSYLQKH-------------YNIPKFNAVGHSMGGLGLTYYMIDYGDDKSLP--PLNKLVSLAGPFN 177 (288)
T ss_pred CchhhHHHHHHHHHHHHHHh-------------cCCceeeeeeeccccHHHHHHHHHhcCCCCCc--chhheEEeccccc
Confidence 34556667788899999998 5677899999999997666555554 456666 8889999988887
Q ss_pred CCCccHHHHHHhhCCCCCCCCCCCCCC-Chh----hhccc-CCCCEEEEEcCCcc------chhh--HHHHHHHHHhcCC
Q 039671 90 GTSPEEDEMWLYMCPTNGGLQDPRLKP-PAE----DLARL-GCERVLIFVAEKDF------LKPV--AMNYYEDLKKSGW 155 (195)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~~p-~~~----~~~~~-~~pp~~i~~g~~D~------l~~~--~~~~~~~l~~~~~ 155 (195)
-.....++-.....-.. ....+- ..+ ..+.. +--.++++.|+.|. .|+. +......+...
T Consensus 178 ~~~l~~de~v~~v~~~~----~~~~~t~y~~y~~~n~k~v~~~~evl~IaGDl~dg~~tDG~Vp~assls~~~lf~~~-- 251 (288)
T COG4814 178 VGNLVPDETVTDVLKDG----PGLIKTPYYDYIAKNYKKVSPNTEVLLIAGDLDDGKQTDGAVPWASSLSIYHLFKKN-- 251 (288)
T ss_pred ccccCCCcchheeeccC----ccccCcHHHHHHHhcceeCCCCcEEEEEecccccCCcCCCceechHhHHHHHHhccC--
Confidence 21111110000000000 001111 000 00000 00148999997752 4444 45555556666
Q ss_pred CccEEEEEecC--CCccccccCCCchHHHHHHHHHHHHHHh
Q 039671 156 KGTVELVETHG--EGHSFYFDNLKCEKAVELINKFVSFITQ 194 (195)
Q Consensus 156 g~~~~~~~~~g--~~H~f~~~~~~~~~~~~~~~~~~~fl~~ 194 (195)
+..+.-.+++| +.| ...++...+.+.+.+||-+
T Consensus 252 ~ksy~e~~~~Gk~a~H------s~lhen~~v~~yv~~FLw~ 286 (288)
T COG4814 252 GKSYIESLYKGKDARH------SKLHENPTVAKYVKNFLWE 286 (288)
T ss_pred cceeEEEeeeCCcchh------hccCCChhHHHHHHHHhhc
Confidence 56777667776 466 2224456777888888753
No 143
>PF11144 DUF2920: Protein of unknown function (DUF2920); InterPro: IPR022605 This bacterial family of proteins has no known function.
Probab=97.72 E-value=0.00019 Score=57.67 Aligned_cols=132 Identities=20% Similarity=-0.007 Sum_probs=82.1
Q ss_pred hHHHHHHHHHHHHHhccCCCCCCCCCCCCCCCceEEeeccchHHHHHHHHHHhccCCCCCCceeEEEeeccccCCCCcc-
Q 039671 16 CYEDSWAALNWVASHAGGNGPEPWLNDHADFGRVFIGGGSAGGNIAHTLAFQVGSIGLPRVKLVGVIMVHPFFGGTSPE- 94 (195)
Q Consensus 16 ~~~D~~~a~~~l~~~~~~~~~~~~~~~~~d~~~i~l~G~S~Gg~la~~~a~~~~~~~~~~~~~~~~i~~~p~~~~~~~~- 94 (195)
|-.|...|+.++.++..+.+ +.-+++.+|+|.||+||...+.-.+- .+.++|--|++..+.-..
T Consensus 162 qAiD~INAl~~l~k~~~~~~---------~~lp~I~~G~s~G~yla~l~~k~aP~------~~~~~iDns~~~~p~l~~I 226 (403)
T PF11144_consen 162 QAIDIINALLDLKKIFPKNG---------GGLPKIYIGSSHGGYLAHLCAKIAPW------LFDGVIDNSSYALPPLRYI 226 (403)
T ss_pred HHHHHHHHHHHHHHhhhccc---------CCCcEEEEecCcHHHHHHHHHhhCcc------ceeEEEecCccccchhhee
Confidence 56799999999999876543 24589999999999999988877643 688888888776542221
Q ss_pred -HHHHH--Hhh-------C-------CCCCCCCCCCCCC-----Chhhhcc------------c-CCCCEEEEEcCCccc
Q 039671 95 -EDEMW--LYM-------C-------PTNGGLQDPRLKP-----PAEDLAR------------L-GCERVLIFVAEKDFL 139 (195)
Q Consensus 95 -~~~~~--~~~-------~-------~~~~~~~~~~~~p-----~~~~~~~------------~-~~pp~~i~~g~~D~l 139 (195)
-+.++ .+. . ...+.+..-..|| ....++. . +-|-.+..|+..|.+
T Consensus 227 ~Gre~~~~~y~~~~~~~~~~~~~i~~~~Kt~Wt~n~~S~~~Fs~~~~~IR~iLn~~HL~iqs~~n~~~~yvsYHs~~D~~ 306 (403)
T PF11144_consen 227 FGREIDFMKYICSGEFFNFKNIRIYCFDKTFWTRNKNSPYYFSKARYIIRSILNPDHLKIQSNYNKKIIYVSYHSIKDDL 306 (403)
T ss_pred eeeecCcccccccccccccCCEEEEEEeccccccCCCCccccChHHHHHHHhcChHHHHHHHhcccceEEEEEeccCCCC
Confidence 00000 000 0 0001111111222 0011111 1 124467789999987
Q ss_pred h--hhHHHHHHHHHhcCCCccEEEEEe
Q 039671 140 K--PVAMNYYEDLKKSGWKGTVELVET 164 (195)
Q Consensus 140 ~--~~~~~~~~~l~~~~~g~~~~~~~~ 164 (195)
. .+-+.+++.+++. |-+++++.+
T Consensus 307 ~p~~~K~~l~~~l~~l--gfda~l~lI 331 (403)
T PF11144_consen 307 APAEDKEELYEILKNL--GFDATLHLI 331 (403)
T ss_pred CCHHHHHHHHHHHHHc--CCCeEEEEe
Confidence 6 4578899999999 788888887
No 144
>PF11187 DUF2974: Protein of unknown function (DUF2974); InterPro: IPR024499 This family of proteins has no known function.
Probab=97.70 E-value=8.9e-05 Score=55.54 Aligned_cols=55 Identities=22% Similarity=0.216 Sum_probs=40.9
Q ss_pred HHHHHHHHHhccCCCCCCCCCCCCCCCceEEeeccchHHHHHHHHHHhccCCCCCCceeEEEeecccc
Q 039671 21 WAALNWVASHAGGNGPEPWLNDHADFGRVFIGGGSAGGNIAHTLAFQVGSIGLPRVKLVGVIMVHPFF 88 (195)
Q Consensus 21 ~~a~~~l~~~~~~~~~~~~~~~~~d~~~i~l~G~S~Gg~la~~~a~~~~~~~~~~~~~~~~i~~~p~~ 88 (195)
..|++|+.+...+++ .+|.|.|||-||+||.+++....+... .+|..+..+.++-
T Consensus 69 ~~A~~yl~~~~~~~~-----------~~i~v~GHSkGGnLA~yaa~~~~~~~~--~rI~~vy~fDgPG 123 (224)
T PF11187_consen 69 KSALAYLKKIAKKYP-----------GKIYVTGHSKGGNLAQYAAANCDDEIQ--DRISKVYSFDGPG 123 (224)
T ss_pred HHHHHHHHHHHHhCC-----------CCEEEEEechhhHHHHHHHHHccHHHh--hheeEEEEeeCCC
Confidence 577778877765443 369999999999999999988543222 2788888887753
No 145
>PLN02733 phosphatidylcholine-sterol O-acyltransferase
Probab=97.70 E-value=9.8e-05 Score=60.65 Aligned_cols=64 Identities=17% Similarity=0.105 Sum_probs=46.2
Q ss_pred CchHHHHHHHHHHHHHhccCCCCCCCCCCCCCCCceEEeeccchHHHHHHHHHHhccCCCCCCceeEEEeeccccCCCC
Q 039671 14 PACYEDSWAALNWVASHAGGNGPEPWLNDHADFGRVFIGGGSAGGNIAHTLAFQVGSIGLPRVKLVGVIMVHPFFGGTS 92 (195)
Q Consensus 14 p~~~~D~~~a~~~l~~~~~~~~~~~~~~~~~d~~~i~l~G~S~Gg~la~~~a~~~~~~~~~~~~~~~~i~~~p~~~~~~ 92 (195)
...++++.+.++.+.+. ...+++.|+||||||.+++.++...++.. ...++.+|++++......
T Consensus 142 ~~~~~~Lk~lIe~~~~~-------------~g~~kV~LVGHSMGGlva~~fl~~~p~~~--~k~I~~~I~la~P~~Gs~ 205 (440)
T PLN02733 142 PETMDGLKKKLETVYKA-------------SGGKKVNIISHSMGGLLVKCFMSLHSDVF--EKYVNSWIAIAAPFQGAP 205 (440)
T ss_pred HHHHHHHHHHHHHHHHH-------------cCCCCEEEEEECHhHHHHHHHHHHCCHhH--HhHhccEEEECCCCCCCc
Confidence 44566777777766654 34578999999999999998877654311 125889999998887754
No 146
>COG2021 MET2 Homoserine acetyltransferase [Amino acid transport and metabolism]
Probab=97.61 E-value=0.0011 Score=52.54 Aligned_cols=57 Identities=19% Similarity=0.233 Sum_probs=42.7
Q ss_pred CCCC-chHHHHHHHHHHHHHhccCCCCCCCCCCCCCCCceE-EeeccchHHHHHHHHHHhccCCCCCCceeEEEeecc
Q 039671 11 RPIP-ACYEDSWAALNWVASHAGGNGPEPWLNDHADFGRVF-IGGGSAGGNIAHTLAFQVGSIGLPRVKLVGVIMVHP 86 (195)
Q Consensus 11 ~~~p-~~~~D~~~a~~~l~~~~~~~~~~~~~~~~~d~~~i~-l~G~S~Gg~la~~~a~~~~~~~~~~~~~~~~i~~~p 86 (195)
..|| -.++|...+-+.|.+. ..-+++. |+|.||||+.|+.++...++ +++.+|.++.
T Consensus 122 ~~FP~~ti~D~V~aq~~ll~~-------------LGI~~l~avvGgSmGGMqaleWa~~yPd------~V~~~i~ia~ 180 (368)
T COG2021 122 SDFPVITIRDMVRAQRLLLDA-------------LGIKKLAAVVGGSMGGMQALEWAIRYPD------RVRRAIPIAT 180 (368)
T ss_pred cCCCcccHHHHHHHHHHHHHh-------------cCcceEeeeeccChHHHHHHHHHHhChH------HHhhhheecc
Confidence 3566 4677888887878776 3345666 99999999999999998876 5666666554
No 147
>PF06342 DUF1057: Alpha/beta hydrolase of unknown function (DUF1057); InterPro: IPR010463 This entry consists of proteins of unknown function which have an alpha/beta hydrolase fold.
Probab=97.56 E-value=0.0027 Score=48.69 Aligned_cols=36 Identities=28% Similarity=0.385 Sum_probs=30.0
Q ss_pred CCCCceEEeeccchHHHHHHHHHHhccCCCCCCceeEEEeecccc
Q 039671 44 ADFGRVFIGGGSAGGNIAHTLAFQVGSIGLPRVKLVGVIMVHPFF 88 (195)
Q Consensus 44 ~d~~~i~l~G~S~Gg~la~~~a~~~~~~~~~~~~~~~~i~~~p~~ 88 (195)
++ .+++.+|||.|+-.|+.++... +..|++++.|+-
T Consensus 102 i~-~~~i~~gHSrGcenal~la~~~--------~~~g~~lin~~G 137 (297)
T PF06342_consen 102 IK-GKLIFLGHSRGCENALQLAVTH--------PLHGLVLINPPG 137 (297)
T ss_pred CC-CceEEEEeccchHHHHHHHhcC--------ccceEEEecCCc
Confidence 55 7899999999999999999887 356888888763
No 148
>PF01764 Lipase_3: Lipase (class 3); InterPro: IPR002921 Triglyceride lipases are lipolytic enzymes that hydrolyse ester linkages of triglycerides []. Lipases are widely distributed in animals, plants and prokaryotes. This family of lipases have been called Class 3 as they are not closely related to other lipase families.; GO: 0004806 triglyceride lipase activity, 0006629 lipid metabolic process; PDB: 1LGY_A 1DTE_A 1DT5_F 4DYH_B 1DU4_C 4EA6_B 1GT6_B 1EIN_A 1DT3_A 1TIB_A ....
Probab=97.52 E-value=0.00052 Score=47.26 Aligned_cols=43 Identities=23% Similarity=0.196 Sum_probs=28.9
Q ss_pred CCceEEeeccchHHHHHHHHHHhccCCCC-CCceeEEEeecccc
Q 039671 46 FGRVFIGGGSAGGNIAHTLAFQVGSIGLP-RVKLVGVIMVHPFF 88 (195)
Q Consensus 46 ~~~i~l~G~S~Gg~la~~~a~~~~~~~~~-~~~~~~~i~~~p~~ 88 (195)
..+|.+.|||.||.+|..++......... ...++....-+|.+
T Consensus 63 ~~~i~itGHSLGGalA~l~a~~l~~~~~~~~~~~~~~~fg~P~~ 106 (140)
T PF01764_consen 63 DYSIVITGHSLGGALASLAAADLASHGPSSSSNVKCYTFGAPRV 106 (140)
T ss_dssp TSEEEEEEETHHHHHHHHHHHHHHHCTTTSTTTEEEEEES-S--
T ss_pred CccchhhccchHHHHHHHHHHhhhhcccccccceeeeecCCccc
Confidence 47899999999999999888887653322 23555555555554
No 149
>COG3150 Predicted esterase [General function prediction only]
Probab=97.50 E-value=0.00097 Score=47.06 Aligned_cols=118 Identities=16% Similarity=0.128 Sum_probs=65.4
Q ss_pred CceEEeeccchHHHHHHHHHHhccCCCCCCceeEEEeeccccCCCCccHHHHHHhhCCCCCC---CCCCCCCC------C
Q 039671 47 GRVFIGGGSAGGNIAHTLAFQVGSIGLPRVKLVGVIMVHPFFGGTSPEEDEMWLYMCPTNGG---LQDPRLKP------P 117 (195)
Q Consensus 47 ~~i~l~G~S~Gg~la~~~a~~~~~~~~~~~~~~~~i~~~p~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~p------~ 117 (195)
++..|+|-|.||+.|..++... .+++ +++.|-+.+.+. ...+++.... .....+.+ -
T Consensus 59 ~~p~ivGssLGGY~At~l~~~~--------Gira-v~~NPav~P~e~-----l~gylg~~en~ytg~~y~le~~hI~~l~ 124 (191)
T COG3150 59 ESPLIVGSSLGGYYATWLGFLC--------GIRA-VVFNPAVRPYEL-----LTGYLGRPENPYTGQEYVLESRHIATLC 124 (191)
T ss_pred CCceEEeecchHHHHHHHHHHh--------CChh-hhcCCCcCchhh-----hhhhcCCCCCCCCcceEEeehhhHHHHH
Confidence 3499999999999999999886 4555 445565544222 2222222110 01111111 1
Q ss_pred hhhhcccCCCCEEEEEcCC-ccchhhHHHHHHHHHhcCCCccEEEEEecCCCccccccCCCchHHHHHHHHHHHHH
Q 039671 118 AEDLARLGCERVLIFVAEK-DFLKPVAMNYYEDLKKSGWKGTVELVETHGEGHSFYFDNLKCEKAVELINKFVSFI 192 (195)
Q Consensus 118 ~~~~~~~~~pp~~i~~g~~-D~l~~~~~~~~~~l~~~~~g~~~~~~~~~g~~H~f~~~~~~~~~~~~~~~~~~~fl 192 (195)
...+..++-|..+.+-... |.+.+.-+.. +.+. ++...+++|++|.|..+. .-++.|+.|.
T Consensus 125 ~~~~~~l~~p~~~~lL~qtgDEvLDyr~a~-a~y~------~~~~~V~dgg~H~F~~f~-------~~l~~i~aF~ 186 (191)
T COG3150 125 VLQFRELNRPRCLVLLSQTGDEVLDYRQAV-AYYH------PCYEIVWDGGDHKFKGFS-------RHLQRIKAFK 186 (191)
T ss_pred HhhccccCCCcEEEeecccccHHHHHHHHH-HHhh------hhhheeecCCCccccchH-------HhHHHHHHHh
Confidence 1223344556677666666 8776543222 2332 336678999999996553 4455555554
No 150
>PF07819 PGAP1: PGAP1-like protein; InterPro: IPR012908 The sequences found in this family are similar to PGAP1 (Q765A7 from SWISSPROT). This is an endoplasmic reticulum membrane protein with a catalytic serine-containing motif that is conserved in a number of lipases. PGAP1 functions as a GPI inositol-deacylase; this deacylation is important for the efficient transport of GPI-anchored proteins from the endoplasmic reticulum to the Golgi body [].; GO: 0016788 hydrolase activity, acting on ester bonds, 0006505 GPI anchor metabolic process, 0006886 intracellular protein transport, 0031227 intrinsic to endoplasmic reticulum membrane
Probab=97.47 E-value=0.00075 Score=50.69 Aligned_cols=69 Identities=16% Similarity=0.080 Sum_probs=47.4
Q ss_pred CCchHHHHHHHHHHHHHhccCCCCCCCCCCCCCCCceEEeeccchHHHHHHHHHHhccCCCCCCceeEEEeeccccCCCC
Q 039671 13 IPACYEDSWAALNWVASHAGGNGPEPWLNDHADFGRVFIGGGSAGGNIAHTLAFQVGSIGLPRVKLVGVIMVHPFFGGTS 92 (195)
Q Consensus 13 ~p~~~~D~~~a~~~l~~~~~~~~~~~~~~~~~d~~~i~l~G~S~Gg~la~~~a~~~~~~~~~~~~~~~~i~~~p~~~~~~ 92 (195)
+..+.+-+..+++.+.+....-. ..+++|+|+||||||.+|..++...... ...++.+|.++-+.....
T Consensus 59 l~~q~~~~~~~i~~i~~~~~~~~--------~~~~~vilVgHSmGGlvar~~l~~~~~~---~~~v~~iitl~tPh~g~~ 127 (225)
T PF07819_consen 59 LQRQAEFLAEAIKYILELYKSNR--------PPPRSVILVGHSMGGLVARSALSLPNYD---PDSVKTIITLGTPHRGSP 127 (225)
T ss_pred HHHHHHHHHHHHHHHHHhhhhcc--------CCCCceEEEEEchhhHHHHHHHhccccc---cccEEEEEEEcCCCCCcc
Confidence 34566677778888877652222 4678999999999998888776554321 136889888776555443
No 151
>PF02450 LCAT: Lecithin:cholesterol acyltransferase; InterPro: IPR003386 Lecithin:cholesterol acyltransferase (LACT), also known as phosphatidylcholine-sterol acyltransferase (2.3.1.43 from EC), is involved in extracellular metabolism of plasma lipoproteins, including cholesterol. It esterifies the free cholesterol transported in plasma lipoproteins, and is activated by apolipoprotein A-I. Defects in LACT cause Norum and Fish eye diseases. This family also includes phospholipid:diacylglycerol acyltransferase (PDAT)(2.3.1.158 from EC), which is involved in triacylglycerol formation by an acyl-CoA independent pathway. The enzyme specifically transfers acyl groups from the sn-2 position of a phospholipid to diacylglycerol, thus forming an sn-1-lysophospholipid [].; GO: 0008374 O-acyltransferase activity, 0006629 lipid metabolic process
Probab=97.46 E-value=0.00019 Score=58.34 Aligned_cols=74 Identities=15% Similarity=0.145 Sum_probs=48.1
Q ss_pred cCCCCCCCCCCchHHHHHHHHHHHHHhccCCCCCCCCCCCCCCCceEEeeccchHHHHHHHHHHhccCCCCCCceeEEEe
Q 039671 4 EYGLFPDRPIPACYEDSWAALNWVASHAGGNGPEPWLNDHADFGRVFIGGGSAGGNIAHTLAFQVGSIGLPRVKLVGVIM 83 (195)
Q Consensus 4 ~Yrlap~~~~p~~~~D~~~a~~~l~~~~~~~~~~~~~~~~~d~~~i~l~G~S~Gg~la~~~a~~~~~~~~~~~~~~~~i~ 83 (195)
|.|++|. ....-...+...++.+.+. ..++|+|+||||||.++..+........-....|++.|.
T Consensus 91 DWR~~~~-~~~~~~~~lk~~ie~~~~~--------------~~~kv~li~HSmGgl~~~~fl~~~~~~~W~~~~i~~~i~ 155 (389)
T PF02450_consen 91 DWRLSPA-ERDEYFTKLKQLIEEAYKK--------------NGKKVVLIAHSMGGLVARYFLQWMPQEEWKDKYIKRFIS 155 (389)
T ss_pred chhhchh-hHHHHHHHHHHHHHHHHHh--------------cCCcEEEEEeCCCchHHHHHHHhccchhhHHhhhhEEEE
Confidence 5677776 2223334444444444332 367999999999999999888776432100126899999
Q ss_pred eccccCCCC
Q 039671 84 VHPFFGGTS 92 (195)
Q Consensus 84 ~~p~~~~~~ 92 (195)
++++..+..
T Consensus 156 i~~p~~Gs~ 164 (389)
T PF02450_consen 156 IGTPFGGSP 164 (389)
T ss_pred eCCCCCCCh
Confidence 998876643
No 152
>KOG3253 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=97.43 E-value=0.002 Score=54.13 Aligned_cols=101 Identities=19% Similarity=0.259 Sum_probs=64.5
Q ss_pred CCCceEEeeccchHHHHHHHHHHhccCCCCCCceeEEEeeccccCCCCccHHHHHHhhCCCCCCCCCCCCCCChhhhccc
Q 039671 45 DFGRVFIGGGSAGGNIAHTLAFQVGSIGLPRVKLVGVIMVHPFFGGTSPEEDEMWLYMCPTNGGLQDPRLKPPAEDLARL 124 (195)
Q Consensus 45 d~~~i~l~G~S~Gg~la~~~a~~~~~~~~~~~~~~~~i~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~ 124 (195)
....|+|+|.|+|+.++..++....+ ..++++|++.=.++.-.. .....+. ..-+++.
T Consensus 248 pha~IiLvGrsmGAlVachVSpsnsd-----v~V~~vVCigypl~~vdg------------prgirDE----~Lldmk~- 305 (784)
T KOG3253|consen 248 PHAPIILVGRSMGALVACHVSPSNSD-----VEVDAVVCIGYPLDTVDG------------PRGIRDE----ALLDMKQ- 305 (784)
T ss_pred CCCceEEEecccCceeeEEeccccCC-----ceEEEEEEecccccCCCc------------ccCCcch----hhHhcCC-
Confidence 45689999999997777666655432 358899888755554221 0011111 1122332
Q ss_pred CCCCEEEEEcCCccchhh--HHHHHHHHHhcCCCccEEEEEecCCCccccccC
Q 039671 125 GCERVLIFVAEKDFLKPV--AMNYYEDLKKSGWKGTVELVETHGEGHSFYFDN 175 (195)
Q Consensus 125 ~~pp~~i~~g~~D~l~~~--~~~~~~~l~~~~~g~~~~~~~~~g~~H~f~~~~ 175 (195)
|+|++.|..|..++. -+.+.+++ ..+++++++.+++|.+..-.
T Consensus 306 ---PVLFV~Gsnd~mcspn~ME~vreKM-----qA~~elhVI~~adhsmaipk 350 (784)
T KOG3253|consen 306 ---PVLFVIGSNDHMCSPNSMEEVREKM-----QAEVELHVIGGADHSMAIPK 350 (784)
T ss_pred ---ceEEEecCCcccCCHHHHHHHHHHh-----hccceEEEecCCCccccCCc
Confidence 799999999988843 23444444 34678999999999886654
No 153
>cd00741 Lipase Lipase. Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation", the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=97.42 E-value=0.00081 Score=47.22 Aligned_cols=44 Identities=27% Similarity=0.321 Sum_probs=31.8
Q ss_pred CCCceEEeeccchHHHHHHHHHHhccCCCCCCceeEEEeeccccCC
Q 039671 45 DFGRVFIGGGSAGGNIAHTLAFQVGSIGLPRVKLVGVIMVHPFFGG 90 (195)
Q Consensus 45 d~~~i~l~G~S~Gg~la~~~a~~~~~~~~~~~~~~~~i~~~p~~~~ 90 (195)
...+|.++|||+||.+|..++........ .....++.+.++-..
T Consensus 26 p~~~i~v~GHSlGg~lA~l~a~~~~~~~~--~~~~~~~~fg~p~~~ 69 (153)
T cd00741 26 PDYKIHVTGHSLGGALAGLAGLDLRGRGL--GRLVRVYTFGPPRVG 69 (153)
T ss_pred CCCeEEEEEcCHHHHHHHHHHHHHHhccC--CCceEEEEeCCCccc
Confidence 45789999999999999999888764211 144556777766544
No 154
>COG4188 Predicted dienelactone hydrolase [General function prediction only]
Probab=97.37 E-value=0.00071 Score=53.64 Aligned_cols=49 Identities=31% Similarity=0.143 Sum_probs=38.0
Q ss_pred chHHHHHHHHHHHHHhccCCCCCCCCCCCCCCCceEEeeccchHHHHHHHHHH
Q 039671 15 ACYEDSWAALNWVASHAGGNGPEPWLNDHADFGRVFIGGGSAGGNIAHTLAFQ 67 (195)
Q Consensus 15 ~~~~D~~~a~~~l~~~~~~~~~~~~~~~~~d~~~i~l~G~S~Gg~la~~~a~~ 67 (195)
+...|+...+.+|.+. .. -+.++..+|..+|+++|||.||+.++.++..
T Consensus 131 erp~dis~lLd~L~~~-~~---sP~l~~~ld~~~Vgv~GhS~GG~T~m~laGA 179 (365)
T COG4188 131 ERPLDISALLDALLQL-TA---SPALAGRLDPQRVGVLGHSFGGYTAMELAGA 179 (365)
T ss_pred cccccHHHHHHHHHHh-hc---CcccccccCccceEEEecccccHHHHHhccc
Confidence 5678999999999887 11 1234455899999999999999999987743
No 155
>KOG2624 consensus Triglyceride lipase-cholesterol esterase [Lipid transport and metabolism]
Probab=97.34 E-value=0.00084 Score=54.45 Aligned_cols=59 Identities=14% Similarity=0.075 Sum_probs=45.9
Q ss_pred hHHHHHHHHHHHHHhccCCCCCCCCCCCCCCCceEEeeccchHHHHHHHHHHhccCCCCCCceeEEEeeccccCC
Q 039671 16 CYEDSWAALNWVASHAGGNGPEPWLNDHADFGRVFIGGGSAGGNIAHTLAFQVGSIGLPRVKLVGVIMVHPFFGG 90 (195)
Q Consensus 16 ~~~D~~~a~~~l~~~~~~~~~~~~~~~~~d~~~i~l~G~S~Gg~la~~~a~~~~~~~~~~~~~~~~i~~~p~~~~ 90 (195)
...|+-+.++++.+. ...+++..+|||.|+.....++...+... .+++..++++|+...
T Consensus 143 ~~yDLPA~IdyIL~~-------------T~~~kl~yvGHSQGtt~~fv~lS~~p~~~---~kI~~~~aLAP~~~~ 201 (403)
T KOG2624|consen 143 GTYDLPAMIDYILEK-------------TGQEKLHYVGHSQGTTTFFVMLSERPEYN---KKIKSFIALAPAAFP 201 (403)
T ss_pred hhcCHHHHHHHHHHh-------------ccccceEEEEEEccchhheehhcccchhh---hhhheeeeecchhhh
Confidence 678999999999987 56789999999999987775555543221 368888888887743
No 156
>KOG4840 consensus Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=97.31 E-value=0.0003 Score=51.92 Aligned_cols=64 Identities=16% Similarity=0.043 Sum_probs=48.8
Q ss_pred CCCCchHHHHHHHHHHHHHhccCCCCCCCCCCCCCCCceEEeeccchHHHHHHHHHHhccCCCCCCceeEEEeeccccCC
Q 039671 11 RPIPACYEDSWAALNWVASHAGGNGPEPWLNDHADFGRVFIGGGSAGGNIAHTLAFQVGSIGLPRVKLVGVIMVHPFFGG 90 (195)
Q Consensus 11 ~~~p~~~~D~~~a~~~l~~~~~~~~~~~~~~~~~d~~~i~l~G~S~Gg~la~~~a~~~~~~~~~~~~~~~~i~~~p~~~~ 90 (195)
..+..-.+|+..+++++... .....|+++|||-|..-.+++.+.... +..+++.|+.+|+.|-
T Consensus 84 ~slk~D~edl~~l~~Hi~~~-------------~fSt~vVL~GhSTGcQdi~yYlTnt~~----~r~iraaIlqApVSDr 146 (299)
T KOG4840|consen 84 FSLKDDVEDLKCLLEHIQLC-------------GFSTDVVLVGHSTGCQDIMYYLTNTTK----DRKIRAAILQAPVSDR 146 (299)
T ss_pred ccccccHHHHHHHHHHhhcc-------------CcccceEEEecCccchHHHHHHHhccc----hHHHHHHHHhCccchh
Confidence 34667889999999977655 345589999999999888877644332 2368899999999886
Q ss_pred C
Q 039671 91 T 91 (195)
Q Consensus 91 ~ 91 (195)
+
T Consensus 147 E 147 (299)
T KOG4840|consen 147 E 147 (299)
T ss_pred h
Confidence 4
No 157
>PF03096 Ndr: Ndr family; InterPro: IPR004142 This family consists of proteins from different gene families: Ndr1/RTP/Drg1, Ndr2, and Ndr3. Their similarity was previously noted []. The precise molecular and cellular function of members of this family is still unknown, yet they are known to be involved in cellular differentiation events. The Ndr1 group was the first to be discovered. Their expression is repressed by the proto-oncogenes N-myc and c-myc, and in line with this observation, Ndr1 protein expression is down-regulated in neoplastic cells, and is reactivated when differentiation is induced by chemicals such as retinoic acid. Ndr2 and Ndr3 expression is not under the control of N-myc or c-myc. Ndr1 expression is also activated by several chemicals: tunicamycin and homocysteine induce Ndr1 in human umbilical endothelial cells; nickel induces Ndr1 in several cell types. Members of this family are found in wide variety of multicellular eukaryotes, including an Ndr1 type protein in Helianthus annuus (Common sunflower), known as Sf21. Interestingly, the highest scoring matches in the noise are all alpha/beta hydrolases (IPR000073 from INTERPRO), suggesting that this family may have an enzymatic function.; PDB: 2QMQ_A 2XMR_B 2XMQ_B 2XMS_A.
Probab=97.13 E-value=0.017 Score=44.55 Aligned_cols=152 Identities=22% Similarity=0.355 Sum_probs=81.2
Q ss_pred CCCchHHHHHHHHHHHHHhccCCCCCCCCCCCCCCCceEEeeccchHHHHHHHHHHhccCCCCCCceeEEEeeccccCCC
Q 039671 12 PIPACYEDSWAALNWVASHAGGNGPEPWLNDHADFGRVFIGGGSAGGNIAHTLAFQVGSIGLPRVKLVGVIMVHPFFGGT 91 (195)
Q Consensus 12 ~~p~~~~D~~~a~~~l~~~~~~~~~~~~~~~~~d~~~i~l~G~S~Gg~la~~~a~~~~~~~~~~~~~~~~i~~~p~~~~~ 91 (195)
.||. ++++++-+..+.++. ..+.++-+|--|||++-+.+|..+++ ++.|+|+++|.....
T Consensus 78 ~yPs-md~LAe~l~~Vl~~f-------------~lk~vIg~GvGAGAnIL~rfAl~~p~------~V~GLiLvn~~~~~~ 137 (283)
T PF03096_consen 78 QYPS-MDQLAEMLPEVLDHF-------------GLKSVIGFGVGAGANILARFALKHPE------RVLGLILVNPTCTAA 137 (283)
T ss_dssp -----HHHHHCTHHHHHHHH-------------T---EEEEEETHHHHHHHHHHHHSGG------GEEEEEEES---S--
T ss_pred cccC-HHHHHHHHHHHHHhC-------------CccEEEEEeeccchhhhhhccccCcc------ceeEEEEEecCCCCc
Confidence 4443 566677777777773 35679999999999999999999876 899999999876542
Q ss_pred Ccc---------------------HHH-HHHhhCCCCCCCC-----------CCCCCC---------------Chhhhcc
Q 039671 92 SPE---------------------EDE-MWLYMCPTNGGLQ-----------DPRLKP---------------PAEDLAR 123 (195)
Q Consensus 92 ~~~---------------------~~~-~~~~~~~~~~~~~-----------~~~~~p---------------~~~~~~~ 123 (195)
.-. .+. +|.+|........ ....+| ....+..
T Consensus 138 gw~Ew~~~K~~~~~L~~~gmt~~~~d~Ll~h~Fg~~~~~~n~Dlv~~yr~~l~~~~Np~Nl~~f~~sy~~R~DL~~~~~~ 217 (283)
T PF03096_consen 138 GWMEWFYQKLSSWLLYSYGMTSSVKDYLLWHYFGKEEEENNSDLVQTYRQHLDERINPKNLALFLNSYNSRTDLSIERPS 217 (283)
T ss_dssp -HHHHHHHHHH-------CTTS-HHHHHHHHHS-HHHHHCT-HHHHHHHHHHHT-TTHHHHHHHHHHHHT-----SECTT
T ss_pred cHHHHHHHHHhcccccccccccchHHhhhhcccccccccccHHHHHHHHHHHhcCCCHHHHHHHHHHHhccccchhhcCC
Confidence 211 000 0111100000000 000111 0001111
Q ss_pred cCCCCEEEEEcCCccchhhHHHHHHHHHhcCCCccEEEEEecCCCccccccCCCchHHHHHHHHHHHHHH
Q 039671 124 LGCERVLIFVAEKDFLKPVAMNYYEDLKKSGWKGTVELVETHGEGHSFYFDNLKCEKAVELINKFVSFIT 193 (195)
Q Consensus 124 ~~~pp~~i~~g~~D~l~~~~~~~~~~l~~~~~g~~~~~~~~~g~~H~f~~~~~~~~~~~~~~~~~~~fl~ 193 (195)
..+ |++++.|..-+.++.+.++..+|... +.++..+++.+= .... +.-.+..+.+.=|++
T Consensus 218 ~~c-~vLlvvG~~Sp~~~~vv~~ns~Ldp~----~ttllkv~dcGg-lV~e----EqP~klaea~~lFlQ 277 (283)
T PF03096_consen 218 LGC-PVLLVVGDNSPHVDDVVEMNSKLDPT----KTTLLKVADCGG-LVLE----EQPGKLAEAFKLFLQ 277 (283)
T ss_dssp CCS--EEEEEETTSTTHHHHHHHHHHS-CC----CEEEEEETT-TT--HHH----H-HHHHHHHHHHHHH
T ss_pred CCC-CeEEEEecCCcchhhHHHHHhhcCcc----cceEEEecccCC-cccc----cCcHHHHHHHHHHHc
Confidence 223 59999999999999999998988554 678888887644 2221 223455555555554
No 158
>cd00519 Lipase_3 Lipase (class 3). Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=97.10 E-value=0.0024 Score=47.93 Aligned_cols=42 Identities=24% Similarity=0.336 Sum_probs=29.2
Q ss_pred CCceEEeeccchHHHHHHHHHHhccCCCCCCceeEEEeecccc
Q 039671 46 FGRVFIGGGSAGGNIAHTLAFQVGSIGLPRVKLVGVIMVHPFF 88 (195)
Q Consensus 46 ~~~i~l~G~S~Gg~la~~~a~~~~~~~~~~~~~~~~i~~~p~~ 88 (195)
..+|.+.|||+||.+|..++....... +...+.++..-+|..
T Consensus 127 ~~~i~vtGHSLGGaiA~l~a~~l~~~~-~~~~i~~~tFg~P~v 168 (229)
T cd00519 127 DYKIIVTGHSLGGALASLLALDLRLRG-PGSDVTVYTFGQPRV 168 (229)
T ss_pred CceEEEEccCHHHHHHHHHHHHHHhhC-CCCceEEEEeCCCCC
Confidence 468999999999999998888765432 112466555555554
No 159
>PF05705 DUF829: Eukaryotic protein of unknown function (DUF829); InterPro: IPR008547 This signature identifies Transmembrane protein 53, that have no known function but are predicted to be integral membrane proteins.
Probab=97.00 E-value=0.028 Score=42.47 Aligned_cols=45 Identities=16% Similarity=0.090 Sum_probs=39.0
Q ss_pred CEEEEEcCCccchh--hHHHHHHHHHhcCCCccEEEEEecCCCcccccc
Q 039671 128 RVLIFVAEKDFLKP--VAMNYYEDLKKSGWKGTVELVETHGEGHSFYFD 174 (195)
Q Consensus 128 p~~i~~g~~D~l~~--~~~~~~~~l~~~~~g~~~~~~~~~g~~H~f~~~ 174 (195)
|-+.+++..|.+++ ..+++++..++. |.+++.+.|++..|.-+.-
T Consensus 180 p~lylYS~~D~l~~~~~ve~~~~~~~~~--G~~V~~~~f~~S~HV~H~r 226 (240)
T PF05705_consen 180 PRLYLYSKADPLIPWRDVEEHAEEARRK--GWDVRAEKFEDSPHVAHLR 226 (240)
T ss_pred CeEEecCCCCcCcCHHHHHHHHHHHHHc--CCeEEEecCCCCchhhhcc
Confidence 69999999999884 489999999999 7899999999999965443
No 160
>PF05677 DUF818: Chlamydia CHLPS protein (DUF818); InterPro: IPR008536 This family of unknown function includes several Chlamydia CHLPS proteins and Legionella SidB proteins.
Probab=96.96 E-value=0.0079 Score=47.43 Aligned_cols=57 Identities=14% Similarity=0.174 Sum_probs=40.3
Q ss_pred CCcCCCCCCC----CCCchHHHHHHHHHHHHHhccCCCCCCCCCCCCCCCceEEeeccchHHHHHHHHHHh
Q 039671 2 SVEYGLFPDR----PIPACYEDSWAALNWVASHAGGNGPEPWLNDHADFGRVFIGGGSAGGNIAHTLAFQV 68 (195)
Q Consensus 2 ~~~Yrlap~~----~~p~~~~D~~~a~~~l~~~~~~~~~~~~~~~~~d~~~i~l~G~S~Gg~la~~~a~~~ 68 (195)
+.|||---.. +-.+.+.|..+.++||+++.. | +.+++|++.|||.||.++..+..+.
T Consensus 176 ~fNYpGVg~S~G~~s~~dLv~~~~a~v~yL~d~~~--G--------~ka~~Ii~yG~SLGG~Vqa~AL~~~ 236 (365)
T PF05677_consen 176 VFNYPGVGSSTGPPSRKDLVKDYQACVRYLRDEEQ--G--------PKAKNIILYGHSLGGGVQAEALKKE 236 (365)
T ss_pred EECCCccccCCCCCCHHHHHHHHHHHHHHHHhccc--C--------CChheEEEeeccccHHHHHHHHHhc
Confidence 4577754222 234566777788888887543 2 6789999999999999988755443
No 161
>PF11288 DUF3089: Protein of unknown function (DUF3089); InterPro: IPR021440 This family of proteins has no known function.
Probab=96.95 E-value=0.0022 Score=47.23 Aligned_cols=43 Identities=19% Similarity=0.193 Sum_probs=36.0
Q ss_pred CchHHHHHHHHHHHHHhccCCCCCCCCCCCCCCCceEEeeccchHHHHHHHHHHh
Q 039671 14 PACYEDSWAALNWVASHAGGNGPEPWLNDHADFGRVFIGGGSAGGNIAHTLAFQV 68 (195)
Q Consensus 14 p~~~~D~~~a~~~l~~~~~~~~~~~~~~~~~d~~~i~l~G~S~Gg~la~~~a~~~ 68 (195)
.-+..|+.+|+++-.++. -+.+.++|+|||-|+.+...+....
T Consensus 74 ~~ay~DV~~AF~~yL~~~------------n~GRPfILaGHSQGs~~l~~LL~e~ 116 (207)
T PF11288_consen 74 DLAYSDVRAAFDYYLANY------------NNGRPFILAGHSQGSMHLLRLLKEE 116 (207)
T ss_pred HhhHHHHHHHHHHHHHhc------------CCCCCEEEEEeChHHHHHHHHHHHH
Confidence 457899999999988884 2456899999999999999888764
No 162
>PF02273 Acyl_transf_2: Acyl transferase; InterPro: IPR003157 LuxD proteins are bacterial acyl transferases. Together with an acyl-protein synthetase (LuxE) and reductase (LuxC), they form a multienzyme complex. This complex channels activated fatty acids into the aldehyde substrate for the luciferase-catalyzed bacterial bioluminescence reaction [, ]. ; GO: 0016746 transferase activity, transferring acyl groups, 0006631 fatty acid metabolic process; PDB: 1THT_B.
Probab=96.94 E-value=0.0033 Score=47.27 Aligned_cols=135 Identities=16% Similarity=0.149 Sum_probs=70.9
Q ss_pred CCCchHHHHHHHHHHHHHhccCCCCCCCCCCCCCCCceEEeeccchHHHHHHHHHHhccCCCCCCceeEEEeeccccCCC
Q 039671 12 PIPACYEDSWAALNWVASHAGGNGPEPWLNDHADFGRVFIGGGSAGGNIAHTLAFQVGSIGLPRVKLVGVIMVHPFFGGT 91 (195)
Q Consensus 12 ~~p~~~~D~~~a~~~l~~~~~~~~~~~~~~~~~d~~~i~l~G~S~Gg~la~~~a~~~~~~~~~~~~~~~~i~~~p~~~~~ 91 (195)
+.....+|+..+++|+.+. ...+++|+..|..|-+|...+.+. .+..+|..-|+.++.
T Consensus 80 tms~g~~sL~~V~dwl~~~--------------g~~~~GLIAaSLSaRIAy~Va~~i--------~lsfLitaVGVVnlr 137 (294)
T PF02273_consen 80 TMSIGKASLLTVIDWLATR--------------GIRRIGLIAASLSARIAYEVAADI--------NLSFLITAVGVVNLR 137 (294)
T ss_dssp -HHHHHHHHHHHHHHHHHT--------------T---EEEEEETTHHHHHHHHTTTS----------SEEEEES--S-HH
T ss_pred chHHhHHHHHHHHHHHHhc--------------CCCcchhhhhhhhHHHHHHHhhcc--------CcceEEEEeeeeeHH
Confidence 3446778999999999964 356899999999998888777653 466777777988875
Q ss_pred CccHHHHHHhhCCCC--CCCCCC-------------------CCCC---ChhhhcccCCCCEEEEEcCCccchhhHHHHH
Q 039671 92 SPEEDEMWLYMCPTN--GGLQDP-------------------RLKP---PAEDLARLGCERVLIFVAEKDFLKPVAMNYY 147 (195)
Q Consensus 92 ~~~~~~~~~~~~~~~--~~~~~~-------------------~~~p---~~~~~~~~~~pp~~i~~g~~D~l~~~~~~~~ 147 (195)
......+-..|.... ...++. .... +..+.+.+.. |++.++++.|..|.+..- .
T Consensus 138 ~TLe~al~~Dyl~~~i~~lp~dldfeGh~l~~~vFv~dc~e~~w~~l~ST~~~~k~l~i-P~iaF~A~~D~WV~q~eV-~ 215 (294)
T PF02273_consen 138 DTLEKALGYDYLQLPIEQLPEDLDFEGHNLGAEVFVTDCFEHGWDDLDSTINDMKRLSI-PFIAFTANDDDWVKQSEV-E 215 (294)
T ss_dssp HHHHHHHSS-GGGS-GGG--SEEEETTEEEEHHHHHHHHHHTT-SSHHHHHHHHTT--S--EEEEEETT-TTS-HHHH-H
T ss_pred HHHHHHhccchhhcchhhCCCcccccccccchHHHHHHHHHcCCccchhHHHHHhhCCC-CEEEEEeCCCccccHHHH-H
Confidence 443111110010000 000000 0011 2233444444 599999999998865433 2
Q ss_pred HHHHhcCCCccEEEEEecCCCccc
Q 039671 148 EDLKKSGWKGTVELVETHGEGHSF 171 (195)
Q Consensus 148 ~~l~~~~~g~~~~~~~~~g~~H~f 171 (195)
+.+...+ ...++++..+|..|+.
T Consensus 216 ~~~~~~~-s~~~klysl~Gs~HdL 238 (294)
T PF02273_consen 216 ELLDNIN-SNKCKLYSLPGSSHDL 238 (294)
T ss_dssp HHHTT-T-T--EEEEEETT-SS-T
T ss_pred HHHHhcC-CCceeEEEecCccchh
Confidence 4455443 3578999999999965
No 163
>COG4757 Predicted alpha/beta hydrolase [General function prediction only]
Probab=96.94 E-value=0.0039 Score=46.53 Aligned_cols=57 Identities=14% Similarity=0.162 Sum_probs=36.3
Q ss_pred CEEEEEcCCccchhh--HHHHHHHHHhcCCCccEEEEEecC----CCccccccCCCchHHHHHHHHHHHHH
Q 039671 128 RVLIFVAEKDFLKPV--AMNYYEDLKKSGWKGTVELVETHG----EGHSFYFDNLKCEKAVELINKFVSFI 192 (195)
Q Consensus 128 p~~i~~g~~D~l~~~--~~~~~~~l~~~~~g~~~~~~~~~g----~~H~f~~~~~~~~~~~~~~~~~~~fl 192 (195)
|+..+...+|+-+++ ...|.....++ +.+...++- .+| +-.+. +..+...+++++|+
T Consensus 218 Pi~~~~~~DD~w~P~As~d~f~~~y~nA----pl~~~~~~~~~~~lGH-~gyfR---~~~Ealwk~~L~w~ 280 (281)
T COG4757 218 PITFSRALDDPWAPPASRDAFASFYRNA----PLEMRDLPRAEGPLGH-MGYFR---EPFEALWKEMLGWF 280 (281)
T ss_pred ceeeeccCCCCcCCHHHHHHHHHhhhcC----cccceecCcccCcccc-hhhhc---cchHHHHHHHHHhh
Confidence 599999999988765 56666666555 556665553 478 22221 11256667777776
No 164
>PF10142 PhoPQ_related: PhoPQ-activated pathogenicity-related protein; InterPro: IPR009199 Proteins in this entry are believed to play a role in virulence/pathogenicity in Salmonella. Salmonella typhi PqaA has been shown to be activated by PhoP/Q two-component regulatory system, which regulates many virulence genes []. It has been also shown to confer resistance to antimicrobial peptides (melittin) []. Members of this family are predicted to belong to the alpha/beta hydrolase domain superfamily.
Probab=96.92 E-value=0.025 Score=45.50 Aligned_cols=129 Identities=14% Similarity=0.112 Sum_probs=76.3
Q ss_pred CCCCceEEeeccchHHHHHHHHHHhccCCCCCCceeEEEeec-cccCCCCccHHHHHHhhCCCCCCC---------CCCC
Q 039671 44 ADFGRVFIGGGSAGGNIAHTLAFQVGSIGLPRVKLVGVIMVH-PFFGGTSPEEDEMWLYMCPTNGGL---------QDPR 113 (195)
Q Consensus 44 ~d~~~i~l~G~S~Gg~la~~~a~~~~~~~~~~~~~~~~i~~~-p~~~~~~~~~~~~~~~~~~~~~~~---------~~~~ 113 (195)
.+.++++|.|.|==|-.+-..|... +|++|++.+. +++++... ....+..+.+..... ....
T Consensus 169 ~~i~~FvV~GaSKRGWTtWltaa~D-------~RV~aivP~Vid~LN~~~~-l~h~y~~yG~~ws~a~~dY~~~gi~~~l 240 (367)
T PF10142_consen 169 VNIEKFVVTGASKRGWTTWLTAAVD-------PRVKAIVPIVIDVLNMKAN-LEHQYRSYGGNWSFAFQDYYNEGITQQL 240 (367)
T ss_pred CCccEEEEeCCchHhHHHHHhhccC-------cceeEEeeEEEccCCcHHH-HHHHHHHhCCCCccchhhhhHhCchhhc
Confidence 6789999999999997666555532 3888888654 66666333 333333333121111 1111
Q ss_pred CCCCh----------hhhcccCCCCEEEEEcCCcc-ch-hhHHHHHHHHHhcCCCccEEEEEecCCCccccccCCCchHH
Q 039671 114 LKPPA----------EDLARLGCERVLIFVAEKDF-LK-PVAMNYYEDLKKSGWKGTVELVETHGEGHSFYFDNLKCEKA 181 (195)
Q Consensus 114 ~~p~~----------~~~~~~~~pp~~i~~g~~D~-l~-~~~~~~~~~l~~~~~g~~~~~~~~~g~~H~f~~~~~~~~~~ 181 (195)
-+|.. .-...+.+ |-+|+.|+.|. +. +.+..|.+.|+. +..+..+|+.+|....
T Consensus 241 ~tp~f~~L~~ivDP~~Y~~rL~~-PK~ii~atgDeFf~pD~~~~y~d~L~G-----~K~lr~vPN~~H~~~~-------- 306 (367)
T PF10142_consen 241 DTPEFDKLMQIVDPYSYRDRLTM-PKYIINATGDEFFVPDSSNFYYDKLPG-----EKYLRYVPNAGHSLIG-------- 306 (367)
T ss_pred CCHHHHHHHHhcCHHHHHHhcCc-cEEEEecCCCceeccCchHHHHhhCCC-----CeeEEeCCCCCcccch--------
Confidence 11100 00112334 47888887775 33 567777787743 5588899999995532
Q ss_pred HHHHHHHHHHHHh
Q 039671 182 VELINKFVSFITQ 194 (195)
Q Consensus 182 ~~~~~~~~~fl~~ 194 (195)
.++++.+..|++.
T Consensus 307 ~~~~~~l~~f~~~ 319 (367)
T PF10142_consen 307 SDVVQSLRAFYNR 319 (367)
T ss_pred HHHHHHHHHHHHH
Confidence 4666667777653
No 165
>PF12048 DUF3530: Protein of unknown function (DUF3530); InterPro: IPR022529 This family of proteins is functionally uncharacterised. This protein is found in bacteria. Proteins in this family are typically between 272 to 336 amino acids in length. These proteins are distantly related to alpa/beta hydrolases so they may act as enzymes.
Probab=96.91 E-value=0.047 Score=43.10 Aligned_cols=116 Identities=14% Similarity=0.147 Sum_probs=71.5
Q ss_pred CCceEEeeccchHHHHHHHHHHhccCCCCCCceeEEEeeccccCCCCccHHHHHHhhCCCCCCCCCCCCCC-Chhhhccc
Q 039671 46 FGRVFIGGGSAGGNIAHTLAFQVGSIGLPRVKLVGVIMVHPFFGGTSPEEDEMWLYMCPTNGGLQDPRLKP-PAEDLARL 124 (195)
Q Consensus 46 ~~~i~l~G~S~Gg~la~~~a~~~~~~~~~~~~~~~~i~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-~~~~~~~~ 124 (195)
..+|+|+|++.|+++++.+...... ..+.++|++++....... .+ ..+.+..+
T Consensus 192 ~~~ivlIg~G~gA~~~~~~la~~~~-----~~~daLV~I~a~~p~~~~---------------------n~~l~~~la~l 245 (310)
T PF12048_consen 192 GKNIVLIGHGTGAGWAARYLAEKPP-----PMPDALVLINAYWPQPDR---------------------NPALAEQLAQL 245 (310)
T ss_pred CceEEEEEeChhHHHHHHHHhcCCC-----cccCeEEEEeCCCCcchh---------------------hhhHHHHhhcc
Confidence 3569999999999999977777653 257899999988655221 00 11233333
Q ss_pred CCCCEEEEEcCCccchhh-HHHHHHHHHhcCCCccEEEEEecCCCccccccCCCchHHHHHHHHHHHHHHhC
Q 039671 125 GCERVLIFVAEKDFLKPV-AMNYYEDLKKSGWKGTVELVETHGEGHSFYFDNLKCEKAVELINKFVSFITQL 195 (195)
Q Consensus 125 ~~pp~~i~~g~~D~l~~~-~~~~~~~l~~~~~g~~~~~~~~~g~~H~f~~~~~~~~~~~~~~~~~~~fl~~~ 195 (195)
+. |++=+++........ ...-....+++. +..++-....+..|.+. .....+.++|..|++++
T Consensus 246 ~i-PvLDi~~~~~~~~~~~a~~R~~~a~r~~-~~~YrQ~~L~~~~~~~~------~~~~~l~~rIrGWL~~~ 309 (310)
T PF12048_consen 246 KI-PVLDIYSADNPASQQTAKQRKQAAKRNK-KPDYRQIQLPGLPDNPS------GWQEQLLRRIRGWLKRH 309 (310)
T ss_pred CC-CEEEEecCCChHHHHHHHHHHHHHHhcc-CCCceeEecCCCCCChh------hHHHHHHHHHHHHHHhh
Confidence 33 588777777443433 222223333332 34567677777777332 22244889999999874
No 166
>KOG3975 consensus Uncharacterized conserved protein [Function unknown]
Probab=96.87 E-value=0.01 Score=44.82 Aligned_cols=53 Identities=11% Similarity=0.245 Sum_probs=37.5
Q ss_pred HHHHHHHHHHHHhccCCCCCCCCCCCCCCCceEEeeccchHHHHHHHHHHhccCCCCCCceeEEEeecc
Q 039671 18 EDSWAALNWVASHAGGNGPEPWLNDHADFGRVFIGGGSAGGNIAHTLAFQVGSIGLPRVKLVGVIMVHP 86 (195)
Q Consensus 18 ~D~~~a~~~l~~~~~~~~~~~~~~~~~d~~~i~l~G~S~Gg~la~~~a~~~~~~~~~~~~~~~~i~~~p 86 (195)
+++..=++++++.. ....+|.++|||-|+++.+.+....... .++..+++.-|
T Consensus 93 ~QV~HKlaFik~~~------------Pk~~ki~iiGHSiGaYm~Lqil~~~k~~----~~vqKa~~LFP 145 (301)
T KOG3975|consen 93 DQVDHKLAFIKEYV------------PKDRKIYIIGHSIGAYMVLQILPSIKLV----FSVQKAVLLFP 145 (301)
T ss_pred hHHHHHHHHHHHhC------------CCCCEEEEEecchhHHHHHHHhhhcccc----cceEEEEEecc
Confidence 55666778888774 2456999999999999999988864431 24555555544
No 167
>PLN02454 triacylglycerol lipase
Probab=96.85 E-value=0.0049 Score=50.02 Aligned_cols=45 Identities=16% Similarity=0.178 Sum_probs=32.7
Q ss_pred chHHHHHHHHHHHHHhccCCCCCCCCCCCCCCCceEEeeccchHHHHHHHHHHhcc
Q 039671 15 ACYEDSWAALNWVASHAGGNGPEPWLNDHADFGRVFIGGGSAGGNIAHTLAFQVGS 70 (195)
Q Consensus 15 ~~~~D~~~a~~~l~~~~~~~~~~~~~~~~~d~~~i~l~G~S~Gg~la~~~a~~~~~ 70 (195)
+..+++...++.+.+... ...-+|++.|||+||.||...|.....
T Consensus 207 S~r~qvl~~V~~l~~~Yp-----------~~~~sI~vTGHSLGGALAtLaA~di~~ 251 (414)
T PLN02454 207 SARSQLLAKIKELLERYK-----------DEKLSIVLTGHSLGASLATLAAFDIVE 251 (414)
T ss_pred HHHHHHHHHHHHHHHhCC-----------CCCceEEEEecCHHHHHHHHHHHHHHH
Confidence 456677777777776532 112259999999999999988877654
No 168
>COG1073 Hydrolases of the alpha/beta superfamily [General function prediction only]
Probab=96.80 E-value=0.0033 Score=48.24 Aligned_cols=61 Identities=25% Similarity=0.414 Sum_probs=43.1
Q ss_pred CEEEEEcCCccchh--hHHHHHHHHHhcCCCccEEEEEecCCCccccccCCCchHHHHHHHHHHHHHHh
Q 039671 128 RVLIFVAEKDFLKP--VAMNYYEDLKKSGWKGTVELVETHGEGHSFYFDNLKCEKAVELINKFVSFITQ 194 (195)
Q Consensus 128 p~~i~~g~~D~l~~--~~~~~~~~l~~~~~g~~~~~~~~~g~~H~f~~~~~~~~~~~~~~~~~~~fl~~ 194 (195)
|+++++|..|..++ .+..+.+..+.. +.+...++++.|..... ..+...+.+.++.+|+++
T Consensus 234 P~l~~~G~~D~~vp~~~~~~~~~~~~~~----~~~~~~~~~~~H~~~~~--~~~~~~~~~~~~~~f~~~ 296 (299)
T COG1073 234 PVLLVHGERDEVVPLRDAEDLYEAARER----PKKLLFVPGGGHIDLYD--NPPAVEQALDKLAEFLER 296 (299)
T ss_pred ceEEEecCCCcccchhhhHHHHhhhccC----CceEEEecCCccccccC--ccHHHHHHHHHHHHHHHH
Confidence 79999999998885 355555554332 56888888989955431 224456888999999876
No 169
>PF00151 Lipase: Lipase; InterPro: IPR013818 Triglyceride lipases (3.1.1.3 from EC) are lipolytic enzymes that hydrolyse ester linkages of triglycerides []. Lipases are widely distributed in animals, plants and prokaryotes. At least three tissue-specific isozymes exist in higher vertebrates, pancreatic, hepatic and gastric/lingual. These lipases are closely related to each other and to lipoprotein lipase (3.1.1.34 from EC), which hydrolyses triglycerides of chylomicrons and very low density lipoproteins (VLDL) []. The most conserved region in all these proteins is centred around a serine residue which has been shown [] to participate, with an histidine and an aspartic acid residue, in a charge relay system. Such a region is also present in lipases of prokaryotic origin and in lecithin-cholesterol acyltransferase (2.3.1.43 from EC) (LCAT) [], which catalyzes fatty acid transfer between phosphatidylcholine and cholesterol.; PDB: 1LPB_B 1LPA_B 1N8S_A 1GPL_A 1W52_X 2PVS_B 2OXE_B 1BU8_A 2PPL_A 1ETH_A ....
Probab=96.70 E-value=0.0045 Score=49.21 Aligned_cols=57 Identities=16% Similarity=0.129 Sum_probs=37.4
Q ss_pred HHHHHHHHHHHHhccCCCCCCCCCCCCCCCceEEeeccchHHHHHHHHHHhccCCCCCCceeEEEeeccccC
Q 039671 18 EDSWAALNWVASHAGGNGPEPWLNDHADFGRVFIGGGSAGGNIAHTLAFQVGSIGLPRVKLVGVIMVHPFFG 89 (195)
Q Consensus 18 ~D~~~a~~~l~~~~~~~~~~~~~~~~~d~~~i~l~G~S~Gg~la~~~a~~~~~~~~~~~~~~~~i~~~p~~~ 89 (195)
+.+...+.+|.+... ++.++|.|+|||.||++|..++..... + .++..+..+.|...
T Consensus 132 ~~la~~l~~L~~~~g-----------~~~~~ihlIGhSLGAHvaG~aG~~~~~-~---~ki~rItgLDPAgP 188 (331)
T PF00151_consen 132 RQLAKFLSFLINNFG-----------VPPENIHLIGHSLGAHVAGFAGKYLKG-G---GKIGRITGLDPAGP 188 (331)
T ss_dssp HHHHHHHHHHHHHH--------------GGGEEEEEETCHHHHHHHHHHHTTT-------SSEEEEES-B-T
T ss_pred HHHHHHHHHHHhhcC-----------CChhHEEEEeeccchhhhhhhhhhccC-c---ceeeEEEecCcccc
Confidence 455566667765432 789999999999999999999998865 2 14556666665543
No 170
>PTZ00472 serine carboxypeptidase (CBP1); Provisional
Probab=96.67 E-value=0.011 Score=49.29 Aligned_cols=67 Identities=18% Similarity=0.200 Sum_probs=46.6
Q ss_pred CchHHHHHHHHHHHHHhccCCCCCCCCCCCCCCCceEEeeccchHHHHHHHHHHhccCC----CCCCceeEEEeeccccC
Q 039671 14 PACYEDSWAALNWVASHAGGNGPEPWLNDHADFGRVFIGGGSAGGNIAHTLAFQVGSIG----LPRVKLVGVIMVHPFFG 89 (195)
Q Consensus 14 p~~~~D~~~a~~~l~~~~~~~~~~~~~~~~~d~~~i~l~G~S~Gg~la~~~a~~~~~~~----~~~~~~~~~i~~~p~~~ 89 (195)
....+|+..+++...+...+ ...++++|+|+|+||+.+..++.+..... .....++|+++..|+++
T Consensus 148 ~~~a~d~~~~l~~f~~~~p~----------~~~~~~~i~GeSygG~y~p~~a~~i~~~n~~~~~~~inLkGi~IGNg~~d 217 (462)
T PTZ00472 148 SEVSEDMYNFLQAFFGSHED----------LRANDLFVVGESYGGHYAPATAYRINMGNKKGDGLYINLAGLAVGNGLTD 217 (462)
T ss_pred HHHHHHHHHHHHHHHHhCcc----------ccCCCEEEEeecchhhhHHHHHHHHHhhccccCCceeeeEEEEEeccccC
Confidence 34566766666655444332 34579999999999999998887764321 12367999999888876
Q ss_pred C
Q 039671 90 G 90 (195)
Q Consensus 90 ~ 90 (195)
.
T Consensus 218 p 218 (462)
T PTZ00472 218 P 218 (462)
T ss_pred h
Confidence 5
No 171
>PF05577 Peptidase_S28: Serine carboxypeptidase S28; InterPro: IPR008758 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S28 (clan SC). The predicted active site residues for members of this family and family S10 occur in the same order in the sequence: S, D, H. These serine proteases include several eukaryotic enzymes such as lysosomal Pro-X carboxypeptidase, dipeptidyl-peptidase II, and thymus-specific serine peptidase [, , , ].; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 3N2Z_B 3JYH_A 3N0T_C.
Probab=96.67 E-value=0.0051 Score=50.76 Aligned_cols=62 Identities=16% Similarity=0.110 Sum_probs=45.2
Q ss_pred CCchHHHHHHHHHHHHHhccCCCCCCCCCCCCCCCceEEeeccchHHHHHHHHHHhccCCCCCCceeEEEeeccccCC
Q 039671 13 IPACYEDSWAALNWVASHAGGNGPEPWLNDHADFGRVFIGGGSAGGNIAHTLAFQVGSIGLPRVKLVGVIMVHPFFGG 90 (195)
Q Consensus 13 ~p~~~~D~~~a~~~l~~~~~~~~~~~~~~~~~d~~~i~l~G~S~Gg~la~~~a~~~~~~~~~~~~~~~~i~~~p~~~~ 90 (195)
...+++|++.++++++..... .+..+++++|.|.||.||+.+-.+.++ .+.|.+..|+++..
T Consensus 89 ~~QALaD~a~F~~~~~~~~~~----------~~~~pwI~~GgSY~G~Laaw~r~kyP~------~~~ga~ASSapv~a 150 (434)
T PF05577_consen 89 SEQALADLAYFIRYVKKKYNT----------APNSPWIVFGGSYGGALAAWFRLKYPH------LFDGAWASSAPVQA 150 (434)
T ss_dssp HHHHHHHHHHHHHHHHHHTTT----------GCC--EEEEEETHHHHHHHHHHHH-TT------T-SEEEEET--CCH
T ss_pred HHHHHHHHHHHHHHHHHhhcC----------CCCCCEEEECCcchhHHHHHHHhhCCC------eeEEEEeccceeee
Confidence 346899999999999965321 345699999999999999999999875 68888888876644
No 172
>PF11339 DUF3141: Protein of unknown function (DUF3141); InterPro: IPR024501 This family of proteins appears to be predominantly expressed in Proteobacteria. Their function is unknown.
Probab=96.66 E-value=0.1 Score=43.64 Aligned_cols=48 Identities=21% Similarity=0.093 Sum_probs=34.9
Q ss_pred chHHHHHHHHHHHHHhccCCCCCCCCCCCCCCCceEEeeccchHHHHHHHHHHhcc
Q 039671 15 ACYEDSWAALNWVASHAGGNGPEPWLNDHADFGRVFIGGGSAGGNIAHTLAFQVGS 70 (195)
Q Consensus 15 ~~~~D~~~a~~~l~~~~~~~~~~~~~~~~~d~~~i~l~G~S~Gg~la~~~a~~~~~ 70 (195)
..++|+..|.....+.....+ -+..+.+|+|.+-||-.++.+|...++
T Consensus 116 QTl~DV~~ae~~Fv~~V~~~h--------p~~~kp~liGnCQgGWa~~mlAA~~Pd 163 (581)
T PF11339_consen 116 QTLEDVMRAEAAFVEEVAERH--------PDAPKPNLIGNCQGGWAAMMLAALRPD 163 (581)
T ss_pred CcHHHHHHHHHHHHHHHHHhC--------CCCCCceEEeccHHHHHHHHHHhcCcC
Confidence 467888887665544433333 344599999999999999988888765
No 173
>KOG3724 consensus Negative regulator of COPII vesicle formation [Intracellular trafficking, secretion, and vesicular transport]
Probab=96.63 E-value=0.0038 Score=54.02 Aligned_cols=51 Identities=20% Similarity=0.105 Sum_probs=37.8
Q ss_pred CCchHHHHHHHHHHHHHhccC-CCCCCCCCCCCCCCceEEeeccchHHHHHHHHHHh
Q 039671 13 IPACYEDSWAALNWVASHAGG-NGPEPWLNDHADFGRVFIGGGSAGGNIAHTLAFQV 68 (195)
Q Consensus 13 ~p~~~~D~~~a~~~l~~~~~~-~~~~~~~~~~~d~~~i~l~G~S~Gg~la~~~a~~~ 68 (195)
..+|.|=+.+|++++.+..+. -+ ...--|..|+|+||||||.+|..++...
T Consensus 152 l~dQtEYV~dAIk~ILslYr~~~e-----~~~p~P~sVILVGHSMGGiVAra~~tlk 203 (973)
T KOG3724|consen 152 LLDQTEYVNDAIKYILSLYRGERE-----YASPLPHSVILVGHSMGGIVARATLTLK 203 (973)
T ss_pred HHHHHHHHHHHHHHHHHHhhcccc-----cCCCCCceEEEEeccchhHHHHHHHhhh
Confidence 456788899999999887654 11 0012377899999999999988777654
No 174
>PF00450 Peptidase_S10: Serine carboxypeptidase; InterPro: IPR001563 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S10 (clan SC). The type example is carboxypeptidase Y from Saccharomyces cerevisiae (Baker's yeast) []. All known carboxypeptidases are either metallo carboxypeptidases or serine carboxypeptidases (3.4.16.5 from EC and 3.4.16.6 from EC). The catalytic activity of the serine carboxypeptidases, like that of the trypsin family serine proteases, is provided by a charge relay system involving an aspartic acid residue hydrogen-bonded to a histidine, which is itself hydrogen-bonded to a serine []. The sequences surrounding the active site serine and histidine residues are highly conserved in all the serine carboxypeptidases.; GO: 0004185 serine-type carboxypeptidase activity, 0006508 proteolysis; PDB: 1AC5_A 1WHS_B 3SC2_B 1WHT_A 1BCR_A 1BCS_A 1GXS_A 1IVY_A 1WPX_A 1YSC_A ....
Probab=96.49 E-value=0.0053 Score=50.08 Aligned_cols=70 Identities=14% Similarity=0.178 Sum_probs=47.6
Q ss_pred chHHHHHHHHHHHHHhccCCCCCCCCCCCCCCCceEEeeccchHHHHHHHHHHhccCCC----CCCceeEEEeeccccCC
Q 039671 15 ACYEDSWAALNWVASHAGGNGPEPWLNDHADFGRVFIGGGSAGGNIAHTLAFQVGSIGL----PRVKLVGVIMVHPFFGG 90 (195)
Q Consensus 15 ~~~~D~~~a~~~l~~~~~~~~~~~~~~~~~d~~~i~l~G~S~Gg~la~~~a~~~~~~~~----~~~~~~~~i~~~p~~~~ 90 (195)
..-+++.+.+++|++-..+++ ....++++|+|.|.||..+-.+|........ +...++|+++..|+++.
T Consensus 111 ~~~~~a~~~~~fl~~f~~~~p-------~~~~~~~yi~GESYgG~yvP~~a~~i~~~~~~~~~~~inLkGi~IGng~~dp 183 (415)
T PF00450_consen 111 NDDQAAEDLYEFLQQFFQKFP-------EYRSNPLYIAGESYGGHYVPALASYILQQNKKGDQPKINLKGIAIGNGWIDP 183 (415)
T ss_dssp SHHHHHHHHHHHHHHHHHHSG-------GGTTSEEEEEEETTHHHHHHHHHHHHHHHTCC--STTSEEEEEEEESE-SBH
T ss_pred hhhHHHHHHHHHHHHhhhhhh-------hccCCCEEEEccccccccchhhHHhhhhccccccccccccccceecCccccc
Confidence 445555555555555444333 1456689999999999988888877554332 35789999999999876
Q ss_pred C
Q 039671 91 T 91 (195)
Q Consensus 91 ~ 91 (195)
.
T Consensus 184 ~ 184 (415)
T PF00450_consen 184 R 184 (415)
T ss_dssp H
T ss_pred c
Confidence 3
No 175
>PF03283 PAE: Pectinacetylesterase
Probab=96.46 E-value=0.015 Score=46.73 Aligned_cols=62 Identities=24% Similarity=0.071 Sum_probs=39.6
Q ss_pred HHHHHHHHHHHHhccCCCCCCCCCCCCCCCceEEeeccchHHHHHHHHHHhccCCCCCCceeEEEeeccccCC
Q 039671 18 EDSWAALNWVASHAGGNGPEPWLNDHADFGRVFIGGGSAGGNIAHTLAFQVGSIGLPRVKLVGVIMVHPFFGG 90 (195)
Q Consensus 18 ~D~~~a~~~l~~~~~~~~~~~~~~~~~d~~~i~l~G~S~Gg~la~~~a~~~~~~~~~~~~~~~~i~~~p~~~~ 90 (195)
.-+.++++||..+. + .++++|+|.|.||||.-++..+-...+.-.+..+++++.-....+|.
T Consensus 138 ~i~~avl~~l~~~g--l---------~~a~~vlltG~SAGG~g~~~~~d~~~~~lp~~~~v~~~~DsG~f~d~ 199 (361)
T PF03283_consen 138 RILRAVLDDLLSNG--L---------PNAKQVLLTGCSAGGLGAILHADYVRDRLPSSVKVKCLSDSGFFLDN 199 (361)
T ss_pred HHHHHHHHHHHHhc--C---------cccceEEEeccChHHHHHHHHHHHHHHHhccCceEEEeccccccccc
Confidence 45778899998872 2 46789999999999987776665544321112355554444334444
No 176
>KOG2931 consensus Differentiation-related gene 1 protein (NDR1 protein), related proteins [Function unknown]
Probab=96.37 E-value=0.16 Score=39.41 Aligned_cols=59 Identities=22% Similarity=0.272 Sum_probs=46.5
Q ss_pred CCCchHHHHHHHHHHHHHhccCCCCCCCCCCCCCCCceEEeeccchHHHHHHHHHHhccCCCCCCceeEEEeeccccCC
Q 039671 12 PIPACYEDSWAALNWVASHAGGNGPEPWLNDHADFGRVFIGGGSAGGNIAHTLAFQVGSIGLPRVKLVGVIMVHPFFGG 90 (195)
Q Consensus 12 ~~p~~~~D~~~a~~~l~~~~~~~~~~~~~~~~~d~~~i~l~G~S~Gg~la~~~a~~~~~~~~~~~~~~~~i~~~p~~~~ 90 (195)
+||. ++|+++-+-.+.++ ...+.|+-+|--+|+++-...|+.+++ ++-|+|++.+...-
T Consensus 101 ~yPs-md~LAd~l~~VL~~-------------f~lk~vIg~GvGAGAyIL~rFAl~hp~------rV~GLvLIn~~~~a 159 (326)
T KOG2931|consen 101 PYPS-MDDLADMLPEVLDH-------------FGLKSVIGMGVGAGAYILARFALNHPE------RVLGLVLINCDPCA 159 (326)
T ss_pred CCCC-HHHHHHHHHHHHHh-------------cCcceEEEecccccHHHHHHHHhcChh------heeEEEEEecCCCC
Confidence 4554 56777777777766 456789999999999999999999976 89999999876543
No 177
>PLN02408 phospholipase A1
Probab=96.37 E-value=0.015 Score=46.65 Aligned_cols=44 Identities=18% Similarity=0.187 Sum_probs=30.4
Q ss_pred hHHHHHHHHHHHHHhccCCCCCCCCCCCCCCCceEEeeccchHHHHHHHHHHhcc
Q 039671 16 CYEDSWAALNWVASHAGGNGPEPWLNDHADFGRVFIGGGSAGGNIAHTLAFQVGS 70 (195)
Q Consensus 16 ~~~D~~~a~~~l~~~~~~~~~~~~~~~~~d~~~i~l~G~S~Gg~la~~~a~~~~~ 70 (195)
.-+++.+.++.+.+... ....+|.|.|||.||.||...+.....
T Consensus 180 ~r~qVl~eI~~ll~~y~-----------~~~~sI~vTGHSLGGALAtLaA~dl~~ 223 (365)
T PLN02408 180 LQEMVREEIARLLQSYG-----------DEPLSLTITGHSLGAALATLTAYDIKT 223 (365)
T ss_pred HHHHHHHHHHHHHHhcC-----------CCCceEEEeccchHHHHHHHHHHHHHH
Confidence 33455566666655432 223479999999999999988887654
No 178
>COG0596 MhpC Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=96.14 E-value=0.013 Score=43.14 Aligned_cols=37 Identities=27% Similarity=0.519 Sum_probs=30.7
Q ss_pred CCceEEeeccchHHHHHHHHHHhccCCCCCCceeEEEeecccc
Q 039671 46 FGRVFIGGGSAGGNIAHTLAFQVGSIGLPRVKLVGVIMVHPFF 88 (195)
Q Consensus 46 ~~~i~l~G~S~Gg~la~~~a~~~~~~~~~~~~~~~~i~~~p~~ 88 (195)
..++.++|||+||.+++.++.+.+. +++++++.++..
T Consensus 87 ~~~~~l~G~S~Gg~~~~~~~~~~p~------~~~~~v~~~~~~ 123 (282)
T COG0596 87 LEKVVLVGHSMGGAVALALALRHPD------RVRGLVLIGPAP 123 (282)
T ss_pred CCceEEEEecccHHHHHHHHHhcch------hhheeeEecCCC
Confidence 3449999999999999999998865 688888888654
No 179
>PF08386 Abhydrolase_4: TAP-like protein; InterPro: IPR013595 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This entry represents a C-terminal domain associated with putative hydrolases and bacterial peptidases that belong to MEROPS peptidase family S33 (clan SC). They are related to a tripeptidyl aminopeptidase from Streptomyces lividans (Q54410 from SWISSPROT). A member of this family (Q6E3K7 from SWISSPROT) is thought to be involved in the C-terminal processing of propionicin F, a bacteriocidin characterised from Propionibacterium freudenreichii []. ; GO: 0008233 peptidase activity
Probab=96.07 E-value=0.027 Score=36.86 Aligned_cols=41 Identities=27% Similarity=0.351 Sum_probs=33.4
Q ss_pred CCEEEEEcCCccch--hhHHHHHHHHHhcCCCccEEEEEecCCCccccc
Q 039671 127 ERVLIFVAEKDFLK--PVAMNYYEDLKKSGWKGTVELVETHGEGHSFYF 173 (195)
Q Consensus 127 pp~~i~~g~~D~l~--~~~~~~~~~l~~~~~g~~~~~~~~~g~~H~f~~ 173 (195)
+|+|++.++.|+.. +.++++.+.|.+. +++.++|.+|+...
T Consensus 35 ~piL~l~~~~Dp~TP~~~a~~~~~~l~~s------~lvt~~g~gHg~~~ 77 (103)
T PF08386_consen 35 PPILVLGGTHDPVTPYEGARAMAARLPGS------RLVTVDGAGHGVYA 77 (103)
T ss_pred CCEEEEecCcCCCCcHHHHHHHHHHCCCc------eEEEEeccCcceec
Confidence 58999999999877 4577777777555 99999999997654
No 180
>PLN02802 triacylglycerol lipase
Probab=96.07 E-value=0.025 Score=46.98 Aligned_cols=45 Identities=13% Similarity=0.102 Sum_probs=30.6
Q ss_pred hHHHHHHHHHHHHHhccCCCCCCCCCCCCCCCceEEeeccchHHHHHHHHHHhccC
Q 039671 16 CYEDSWAALNWVASHAGGNGPEPWLNDHADFGRVFIGGGSAGGNIAHTLAFQVGSI 71 (195)
Q Consensus 16 ~~~D~~~a~~~l~~~~~~~~~~~~~~~~~d~~~i~l~G~S~Gg~la~~~a~~~~~~ 71 (195)
.-+++.+.++.+.+... ...-+|.|.|||.||.||...+......
T Consensus 310 ~reqVl~eV~~Ll~~Y~-----------~e~~sI~VTGHSLGGALAtLaA~dL~~~ 354 (509)
T PLN02802 310 LSESVVGEVRRLMEKYK-----------GEELSITVTGHSLGAALALLVADELATC 354 (509)
T ss_pred HHHHHHHHHHHHHHhCC-----------CCcceEEEeccchHHHHHHHHHHHHHHh
Confidence 33455555666555421 2224799999999999999888776543
No 181
>PLN02213 sinapoylglucose-malate O-sinapoyltransferase/ carboxypeptidase
Probab=96.02 E-value=0.039 Score=43.69 Aligned_cols=48 Identities=19% Similarity=0.221 Sum_probs=37.5
Q ss_pred CCCCceEEeeccchHHHHHHHHHHhccCC----CCCCceeEEEeeccccCCC
Q 039671 44 ADFGRVFIGGGSAGGNIAHTLAFQVGSIG----LPRVKLVGVIMVHPFFGGT 91 (195)
Q Consensus 44 ~d~~~i~l~G~S~Gg~la~~~a~~~~~~~----~~~~~~~~~i~~~p~~~~~ 91 (195)
...++++|+|+|.||+.+-.++......+ .+...++|++.-.|+++..
T Consensus 48 ~~~~~fyI~GESYaG~YiP~la~~I~~~n~~~~~~~inLkGi~IGNg~t~~~ 99 (319)
T PLN02213 48 YFSNPLYVVGDSYSGMIVPALVQEISQGNYICCEPPINLQGYMLGNPVTYMD 99 (319)
T ss_pred cccCCeEEEeeccccchHHHHHHHHHhhcccccCCceeeeEEEeCCCCCCcc
Confidence 45788999999999998888887764322 2346899999999988764
No 182
>COG2936 Predicted acyl esterases [General function prediction only]
Probab=95.98 E-value=0.087 Score=44.58 Aligned_cols=59 Identities=19% Similarity=0.113 Sum_probs=49.4
Q ss_pred chHHHHHHHHHHHHHhccCCCCCCCCCCCCCCCceEEeeccchHHHHHHHHHHhccCCCCCCceeEEEeeccccCCC
Q 039671 15 ACYEDSWAALNWVASHAGGNGPEPWLNDHADFGRVFIGGGSAGGNIAHTLAFQVGSIGLPRVKLVGVIMVHPFFGGT 91 (195)
Q Consensus 15 ~~~~D~~~a~~~l~~~~~~~~~~~~~~~~~d~~~i~l~G~S~Gg~la~~~a~~~~~~~~~~~~~~~~i~~~p~~~~~ 91 (195)
...+|..+.++||.++.- ...+|+.+|.|.+|.-.+++|...+ +.+|+++..++..|..
T Consensus 104 ~E~~Dg~D~I~Wia~QpW------------sNG~Vgm~G~SY~g~tq~~~Aa~~p------PaLkai~p~~~~~D~y 162 (563)
T COG2936 104 REAEDGYDTIEWLAKQPW------------SNGNVGMLGLSYLGFTQLAAAALQP------PALKAIAPTEGLVDRY 162 (563)
T ss_pred ccccchhHHHHHHHhCCc------------cCCeeeeecccHHHHHHHHHHhcCC------chheeecccccccccc
Confidence 377899999999999863 4459999999999999998888764 3789999988888753
No 183
>PF05057 DUF676: Putative serine esterase (DUF676); InterPro: IPR007751 This domain, whose function is unknown, is found within a group of putative lipases.
Probab=95.97 E-value=0.045 Score=40.85 Aligned_cols=41 Identities=17% Similarity=0.100 Sum_probs=28.3
Q ss_pred HHHHHHHHhccCCCCCCCCCCCCCCCceEEeeccchHHHHHHHHHHhcc
Q 039671 22 AALNWVASHAGGNGPEPWLNDHADFGRVFIGGGSAGGNIAHTLAFQVGS 70 (195)
Q Consensus 22 ~a~~~l~~~~~~~~~~~~~~~~~d~~~i~l~G~S~Gg~la~~~a~~~~~ 70 (195)
..++++.+...... ....+|.++|||+||.++-++......
T Consensus 61 rL~~eI~~~~~~~~--------~~~~~IsfIgHSLGGli~r~al~~~~~ 101 (217)
T PF05057_consen 61 RLAEEILEHIKDYE--------SKIRKISFIGHSLGGLIARYALGLLHD 101 (217)
T ss_pred HHHHHHHHhccccc--------cccccceEEEecccHHHHHHHHHHhhh
Confidence 34556666655443 334689999999999998876665543
No 184
>COG3319 Thioesterase domains of type I polyketide synthases or non-ribosomal peptide synthetases [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=95.95 E-value=0.039 Score=42.23 Aligned_cols=39 Identities=21% Similarity=0.191 Sum_probs=33.0
Q ss_pred ceEEeeccchHHHHHHHHHHhccCCCCCCceeEEEeeccccC
Q 039671 48 RVFIGGGSAGGNIAHTLAFQVGSIGLPRVKLVGVIMVHPFFG 89 (195)
Q Consensus 48 ~i~l~G~S~Gg~la~~~a~~~~~~~~~~~~~~~~i~~~p~~~ 89 (195)
.+.|.|+|.||++|..+|.+....|. .++.++++..+..
T Consensus 66 Py~L~G~S~GG~vA~evA~qL~~~G~---~Va~L~llD~~~~ 104 (257)
T COG3319 66 PYVLLGWSLGGAVAFEVAAQLEAQGE---EVAFLGLLDAVPP 104 (257)
T ss_pred CEEEEeeccccHHHHHHHHHHHhCCC---eEEEEEEeccCCC
Confidence 79999999999999999999877664 5788888777666
No 185
>PLN02571 triacylglycerol lipase
Probab=95.93 E-value=0.032 Score=45.45 Aligned_cols=44 Identities=14% Similarity=0.115 Sum_probs=30.8
Q ss_pred hHHHHHHHHHHHHHhccCCCCCCCCCCCCCCCceEEeeccchHHHHHHHHHHhcc
Q 039671 16 CYEDSWAALNWVASHAGGNGPEPWLNDHADFGRVFIGGGSAGGNIAHTLAFQVGS 70 (195)
Q Consensus 16 ~~~D~~~a~~~l~~~~~~~~~~~~~~~~~d~~~i~l~G~S~Gg~la~~~a~~~~~ 70 (195)
.-+++.+.++.+.+... -..-+|+|.|||+||.||...|.....
T Consensus 206 ar~qvl~eV~~L~~~y~-----------~e~~sI~VTGHSLGGALAtLaA~dl~~ 249 (413)
T PLN02571 206 ARDQVLNEVGRLVEKYK-----------DEEISITICGHSLGAALATLNAVDIVA 249 (413)
T ss_pred HHHHHHHHHHHHHHhcC-----------cccccEEEeccchHHHHHHHHHHHHHH
Confidence 44566666666665532 112379999999999999988887643
No 186
>PF05990 DUF900: Alpha/beta hydrolase of unknown function (DUF900); InterPro: IPR010297 This domain is associated with proteins of unknown function, which are hydrolase-like.
Probab=95.91 E-value=0.023 Score=42.89 Aligned_cols=46 Identities=22% Similarity=0.263 Sum_probs=35.3
Q ss_pred CCCceEEeeccchHHHHHHHHHHhccCCCC---CCceeEEEeeccccCC
Q 039671 45 DFGRVFIGGGSAGGNIAHTLAFQVGSIGLP---RVKLVGVIMVHPFFGG 90 (195)
Q Consensus 45 d~~~i~l~G~S~Gg~la~~~a~~~~~~~~~---~~~~~~~i~~~p~~~~ 90 (195)
...+|-|++||||+.+.+.........+.. ..++..+++.+|-++.
T Consensus 91 ~~~~I~ilaHSMG~rv~~~aL~~l~~~~~~~~~~~~~~~viL~ApDid~ 139 (233)
T PF05990_consen 91 GIKRIHILAHSMGNRVLLEALRQLASEGERPDVKARFDNVILAAPDIDN 139 (233)
T ss_pred CCceEEEEEeCchHHHHHHHHHHHHhcccchhhHhhhheEEEECCCCCH
Confidence 467999999999999999777766543321 1367889999988877
No 187
>PLN02209 serine carboxypeptidase
Probab=95.91 E-value=0.032 Score=46.14 Aligned_cols=67 Identities=13% Similarity=0.136 Sum_probs=45.9
Q ss_pred HHHHHHHHHHHHHhccCCCCCCCCCCCCCCCceEEeeccchHHHHHHHHHHhccCC----CCCCceeEEEeeccccCC
Q 039671 17 YEDSWAALNWVASHAGGNGPEPWLNDHADFGRVFIGGGSAGGNIAHTLAFQVGSIG----LPRVKLVGVIMVHPFFGG 90 (195)
Q Consensus 17 ~~D~~~a~~~l~~~~~~~~~~~~~~~~~d~~~i~l~G~S~Gg~la~~~a~~~~~~~----~~~~~~~~~i~~~p~~~~ 90 (195)
-+++.+.+++|+.-..++++ ...++++|+|+|.||+.+-.++....+.. .+...++|+++..|+++.
T Consensus 144 ~~~a~~~~~fl~~f~~~~p~-------~~~~~~yi~GESYaG~yvP~~a~~i~~~~~~~~~~~inl~Gi~igng~td~ 214 (437)
T PLN02209 144 TSEVKKIHEFLQKWLIKHPQ-------FLSNPFYVVGDSYSGMIVPALVHEISKGNYICCNPPINLQGYVLGNPITHI 214 (437)
T ss_pred HHHHHHHHHHHHHHHHhCcc-------ccCCCEEEEecCcCceehHHHHHHHHhhcccccCCceeeeeEEecCcccCh
Confidence 35556666666554443321 34568999999999998887777654321 234688999999998875
No 188
>PLN00413 triacylglycerol lipase
Probab=95.88 E-value=0.02 Score=47.27 Aligned_cols=40 Identities=18% Similarity=0.254 Sum_probs=28.6
Q ss_pred hHHHHHHHHHHHHHhccCCCCCCCCCCCCCCCceEEeeccchHHHHHHHHHHh
Q 039671 16 CYEDSWAALNWVASHAGGNGPEPWLNDHADFGRVFIGGGSAGGNIAHTLAFQV 68 (195)
Q Consensus 16 ~~~D~~~a~~~l~~~~~~~~~~~~~~~~~d~~~i~l~G~S~Gg~la~~~a~~~ 68 (195)
+..++...++.+.+. ....+|.|.|||.||.||...+...
T Consensus 266 ayy~i~~~Lk~ll~~-------------~p~~kliVTGHSLGGALAtLaA~~L 305 (479)
T PLN00413 266 AYYTILRHLKEIFDQ-------------NPTSKFILSGHSLGGALAILFTAVL 305 (479)
T ss_pred hHHHHHHHHHHHHHH-------------CCCCeEEEEecCHHHHHHHHHHHHH
Confidence 334566666666554 2345899999999999999877543
No 189
>KOG1553 consensus Predicted alpha/beta hydrolase BAT5 [General function prediction only]
Probab=95.62 E-value=0.021 Score=45.14 Aligned_cols=52 Identities=17% Similarity=0.077 Sum_probs=41.1
Q ss_pred HHHHHHHHHhccCCCCCCCCCCCCCCCceEEeeccchHHHHHHHHHHhccCCCCCCceeEEEeeccccCC
Q 039671 21 WAALNWVASHAGGNGPEPWLNDHADFGRVFIGGGSAGGNIAHTLAFQVGSIGLPRVKLVGVIMVHPFFGG 90 (195)
Q Consensus 21 ~~a~~~l~~~~~~~~~~~~~~~~~d~~~i~l~G~S~Gg~la~~~a~~~~~~~~~~~~~~~~i~~~p~~~~ 90 (195)
.++++|..+... ..++.|+|.|+|.||.-++++|...+ .++++|+=..+-|.
T Consensus 296 DaVvQfAI~~Lg-----------f~~edIilygWSIGGF~~~waAs~YP-------dVkavvLDAtFDDl 347 (517)
T KOG1553|consen 296 DAVVQFAIQVLG-----------FRQEDIILYGWSIGGFPVAWAASNYP-------DVKAVVLDATFDDL 347 (517)
T ss_pred HHHHHHHHHHcC-----------CCccceEEEEeecCCchHHHHhhcCC-------CceEEEeecchhhh
Confidence 345777777653 67889999999999999999999886 68999886655443
No 190
>PLN03016 sinapoylglucose-malate O-sinapoyltransferase
Probab=95.60 E-value=0.046 Score=45.17 Aligned_cols=47 Identities=19% Similarity=0.241 Sum_probs=36.4
Q ss_pred CCCceEEeeccchHHHHHHHHHHhccCC----CCCCceeEEEeeccccCCC
Q 039671 45 DFGRVFIGGGSAGGNIAHTLAFQVGSIG----LPRVKLVGVIMVHPFFGGT 91 (195)
Q Consensus 45 d~~~i~l~G~S~Gg~la~~~a~~~~~~~----~~~~~~~~~i~~~p~~~~~ 91 (195)
..++++|+|+|.||+.+-.+|....+.. .+...++|+++-.|+++..
T Consensus 163 ~~~~~yi~GESYaG~yvP~la~~i~~~n~~~~~~~inLkGi~iGNg~t~~~ 213 (433)
T PLN03016 163 FSNPLYVVGDSYSGMIVPALVQEISQGNYICCEPPINLQGYMLGNPVTYMD 213 (433)
T ss_pred cCCCEEEEccCccceehHHHHHHHHhhcccccCCcccceeeEecCCCcCch
Confidence 4578999999999998888887764322 2346899999999988664
No 191
>PLN02719 triacylglycerol lipase
Probab=95.57 E-value=0.065 Score=44.70 Aligned_cols=48 Identities=19% Similarity=0.283 Sum_probs=32.9
Q ss_pred chHHHHHHHHHHHHHhccCCCCCCCCCCCCCCCceEEeeccchHHHHHHHHHHhcc
Q 039671 15 ACYEDSWAALNWVASHAGGNGPEPWLNDHADFGRVFIGGGSAGGNIAHTLAFQVGS 70 (195)
Q Consensus 15 ~~~~D~~~a~~~l~~~~~~~~~~~~~~~~~d~~~i~l~G~S~Gg~la~~~a~~~~~ 70 (195)
..-+++.+.++-+.+...... ...-+|.|.|||+||.||...|.....
T Consensus 274 SaReQVl~eV~rL~~~Ypd~~--------ge~~sItVTGHSLGGALAtLaA~Dl~~ 321 (518)
T PLN02719 274 SAREQVLTEVKRLVERYGDEE--------GEELSITVTGHSLGGALAVLSAYDVAE 321 (518)
T ss_pred hHHHHHHHHHHHHHHHCCccc--------CCcceEEEecCcHHHHHHHHHHHHHHH
Confidence 345666666766666543211 123489999999999999988877654
No 192
>PLN02310 triacylglycerol lipase
Probab=95.56 E-value=0.052 Score=44.13 Aligned_cols=45 Identities=18% Similarity=0.254 Sum_probs=30.1
Q ss_pred hHHHHHHHHHHHHHhccCCCCCCCCCCCCCCCceEEeeccchHHHHHHHHHHhc
Q 039671 16 CYEDSWAALNWVASHAGGNGPEPWLNDHADFGRVFIGGGSAGGNIAHTLAFQVG 69 (195)
Q Consensus 16 ~~~D~~~a~~~l~~~~~~~~~~~~~~~~~d~~~i~l~G~S~Gg~la~~~a~~~~ 69 (195)
.-+++...++.|.+..... ....+|.|.|||+||.||...+....
T Consensus 187 a~~qVl~eV~~L~~~y~~~---------~e~~sI~vTGHSLGGALAtLaA~dl~ 231 (405)
T PLN02310 187 ASEQVMQEVKRLVNFYRGK---------GEEVSLTVTGHSLGGALALLNAYEAA 231 (405)
T ss_pred HHHHHHHHHHHHHHhhccc---------CCcceEEEEcccHHHHHHHHHHHHHH
Confidence 3455666666666543211 12347999999999999998887654
No 193
>COG4782 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=95.56 E-value=0.04 Score=43.86 Aligned_cols=60 Identities=17% Similarity=0.119 Sum_probs=46.1
Q ss_pred HHHHHHHHHHHHhccCCCCCCCCCCCCCCCceEEeeccchHHHHHHHHHHhccCCC--CCCceeEEEeeccccCC
Q 039671 18 EDSWAALNWVASHAGGNGPEPWLNDHADFGRVFIGGGSAGGNIAHTLAFQVGSIGL--PRVKLVGVIMVHPFFGG 90 (195)
Q Consensus 18 ~D~~~a~~~l~~~~~~~~~~~~~~~~~d~~~i~l~G~S~Gg~la~~~a~~~~~~~~--~~~~~~~~i~~~p~~~~ 90 (195)
.++..++++|.+. ....+|.|++||||..+++....+..-.+. -+.+++-+|+.+|=.|.
T Consensus 175 ~aLe~~lr~La~~-------------~~~~~I~ilAHSMGtwl~~e~LrQLai~~~~~l~~ki~nViLAaPDiD~ 236 (377)
T COG4782 175 PALERLLRYLATD-------------KPVKRIYLLAHSMGTWLLMEALRQLAIRADRPLPAKIKNVILAAPDIDV 236 (377)
T ss_pred HHHHHHHHHHHhC-------------CCCceEEEEEecchHHHHHHHHHHHhccCCcchhhhhhheEeeCCCCCh
Confidence 5666777777776 345799999999999999988877653222 23578899999998877
No 194
>PLN02517 phosphatidylcholine-sterol O-acyltransferase
Probab=95.55 E-value=0.028 Score=47.70 Aligned_cols=75 Identities=11% Similarity=-0.024 Sum_probs=45.9
Q ss_pred CcCCCCCCCC--CCchHHHHHHHHHHHHHhccCCCCCCCCCCCCCCCceEEeeccchHHHHHHHHHHhccCC-------C
Q 039671 3 VEYGLFPDRP--IPACYEDSWAALNWVASHAGGNGPEPWLNDHADFGRVFIGGGSAGGNIAHTLAFQVGSIG-------L 73 (195)
Q Consensus 3 ~~Yrlap~~~--~p~~~~D~~~a~~~l~~~~~~~~~~~~~~~~~d~~~i~l~G~S~Gg~la~~~a~~~~~~~-------~ 73 (195)
-|.|+++... -..-+..+...++.+.+. -..++|+|+||||||.+++++........ .
T Consensus 180 YDWRls~~~le~rd~YF~rLK~lIE~ay~~-------------nggkKVVLV~HSMGglv~lyFL~wv~~~~~~gG~gG~ 246 (642)
T PLN02517 180 YDWRLSFQNTEVRDQTLSRLKSNIELMVAT-------------NGGKKVVVVPHSMGVLYFLHFMKWVEAPAPMGGGGGP 246 (642)
T ss_pred cccccCccchhhhhHHHHHHHHHHHHHHHH-------------cCCCeEEEEEeCCchHHHHHHHHhccccccccCCcch
Confidence 3677886432 134445566666655543 23579999999999999998766432110 0
Q ss_pred --CCCceeEEEeeccccCC
Q 039671 74 --PRVKLVGVIMVHPFFGG 90 (195)
Q Consensus 74 --~~~~~~~~i~~~p~~~~ 90 (195)
...-|++.|.++|.+-.
T Consensus 247 ~W~dKyI~s~I~Iagp~lG 265 (642)
T PLN02517 247 GWCAKHIKAVMNIGGPFLG 265 (642)
T ss_pred HHHHHHHHHheecccccCC
Confidence 01246777888776544
No 195
>PLN02934 triacylglycerol lipase
Probab=95.55 E-value=0.031 Score=46.48 Aligned_cols=41 Identities=17% Similarity=0.248 Sum_probs=29.5
Q ss_pred chHHHHHHHHHHHHHhccCCCCCCCCCCCCCCCceEEeeccchHHHHHHHHHHh
Q 039671 15 ACYEDSWAALNWVASHAGGNGPEPWLNDHADFGRVFIGGGSAGGNIAHTLAFQV 68 (195)
Q Consensus 15 ~~~~D~~~a~~~l~~~~~~~~~~~~~~~~~d~~~i~l~G~S~Gg~la~~~a~~~ 68 (195)
.+...+...++-+.+. ....+|++.|||.||.||...+...
T Consensus 302 ~Ay~~v~~~lk~ll~~-------------~p~~kIvVTGHSLGGALAtLaA~~L 342 (515)
T PLN02934 302 SAYYAVRSKLKSLLKE-------------HKNAKFVVTGHSLGGALAILFPTVL 342 (515)
T ss_pred hHHHHHHHHHHHHHHH-------------CCCCeEEEeccccHHHHHHHHHHHH
Confidence 4445566666666665 2346899999999999999777543
No 196
>TIGR03712 acc_sec_asp2 accessory Sec system protein Asp2. This protein is designated Asp2 because, along with SecY2, SecA2, and other proteins it is part of the accessory secretory protein system. The system is involved in the export of serine-rich glycoproteins important for virulence in a number of Gram-positive species, including Streptococcus gordonii and Staphylococcus aureus. This protein family is assigned to transport rather than glycosylation function, but the specific molecular role is unknown.
Probab=95.52 E-value=0.2 Score=41.53 Aligned_cols=40 Identities=18% Similarity=0.156 Sum_probs=36.1
Q ss_pred CCCCceEEeeccchHHHHHHHHHHhccCCCCCCceeEEEeeccccCCC
Q 039671 44 ADFGRVFIGGGSAGGNIAHTLAFQVGSIGLPRVKLVGVIMVHPFFGGT 91 (195)
Q Consensus 44 ~d~~~i~l~G~S~Gg~la~~~a~~~~~~~~~~~~~~~~i~~~p~~~~~ 91 (195)
.+.+.++|.|-|||.+=|++++.+. +++|+|+--|..++.
T Consensus 354 F~~~qLILSGlSMGTfgAlYYga~l--------~P~AIiVgKPL~NLG 393 (511)
T TIGR03712 354 FDHDQLILSGLSMGTFGALYYGAKL--------SPHAIIVGKPLVNLG 393 (511)
T ss_pred CCHHHeeeccccccchhhhhhcccC--------CCceEEEcCcccchh
Confidence 8899999999999999999999997 678999988988763
No 197
>KOG2183 consensus Prolylcarboxypeptidase (angiotensinase C) [Posttranslational modification, protein turnover, chaperones; General function prediction only]
Probab=95.52 E-value=0.015 Score=47.00 Aligned_cols=62 Identities=21% Similarity=0.195 Sum_probs=47.0
Q ss_pred CchHHHHHHHHHHHHHhccCCCCCCCCCCCCCCCceEEeeccchHHHHHHHHHHhccCCCCCCceeEEEeeccccCCC
Q 039671 14 PACYEDSWAALNWVASHAGGNGPEPWLNDHADFGRVFIGGGSAGGNIAHTLAFQVGSIGLPRVKLVGVIMVHPFFGGT 91 (195)
Q Consensus 14 p~~~~D~~~a~~~l~~~~~~~~~~~~~~~~~d~~~i~l~G~S~Gg~la~~~a~~~~~~~~~~~~~~~~i~~~p~~~~~ 91 (195)
..++.|.+..+++|++... .....|+.+|.|.||+||+.+=++.+.. -+.++...+|++-+.
T Consensus 145 eQALADfA~ll~~lK~~~~-----------a~~~pvIafGGSYGGMLaAWfRlKYPHi-----v~GAlAaSAPvl~f~ 206 (492)
T KOG2183|consen 145 EQALADFAELLTFLKRDLS-----------AEASPVIAFGGSYGGMLAAWFRLKYPHI-----VLGALAASAPVLYFE 206 (492)
T ss_pred HHHHHHHHHHHHHHhhccc-----------cccCcEEEecCchhhHHHHHHHhcChhh-----hhhhhhccCceEeec
Confidence 4678999999999988743 5567899999999999999988887642 234445566776554
No 198
>KOG1282 consensus Serine carboxypeptidases (lysosomal cathepsin A) [Posttranslational modification, protein turnover, chaperones; Amino acid transport and metabolism]
Probab=95.51 E-value=0.049 Score=45.07 Aligned_cols=83 Identities=12% Similarity=0.066 Sum_probs=56.1
Q ss_pred CcCCCCCCCCCCchHHHHHHHHHHHHHhccCCCCCCCCCCCCCCCceEEeeccchHHHHHHHHHHhccCC----CCCCce
Q 039671 3 VEYGLFPDRPIPACYEDSWAALNWVASHAGGNGPEPWLNDHADFGRVFIGGGSAGGNIAHTLAFQVGSIG----LPRVKL 78 (195)
Q Consensus 3 ~~Yrlap~~~~p~~~~D~~~a~~~l~~~~~~~~~~~~~~~~~d~~~i~l~G~S~Gg~la~~~a~~~~~~~----~~~~~~ 78 (195)
..|.-.+..--+..-.-+.+.+.+|.+-.+++++ ...+.++|.|+|.+|+.+-.+|....+.+ .+...+
T Consensus 131 FSYs~~~~~~~~~D~~~A~d~~~FL~~wf~kfPe-------y~~~~fyI~GESYAG~YVP~La~~I~~~N~~~~~~~iNL 203 (454)
T KOG1282|consen 131 FSYSNTSSDYKTGDDGTAKDNYEFLQKWFEKFPE-------YKSNDFYIAGESYAGHYVPALAQEILKGNKKCCKPNINL 203 (454)
T ss_pred ccccCCCCcCcCCcHHHHHHHHHHHHHHHHhChh-------hcCCCeEEecccccceehHHHHHHHHhccccccCCcccc
Confidence 4455554432344444455556655555554431 66789999999999998888887766532 345789
Q ss_pred eEEEeeccccCCCC
Q 039671 79 VGVIMVHPFFGGTS 92 (195)
Q Consensus 79 ~~~i~~~p~~~~~~ 92 (195)
+|++.-.|+++...
T Consensus 204 kG~~IGNg~td~~~ 217 (454)
T KOG1282|consen 204 KGYAIGNGLTDPEI 217 (454)
T ss_pred eEEEecCcccCccc
Confidence 99999999887643
No 199
>PLN03037 lipase class 3 family protein; Provisional
Probab=95.48 E-value=0.061 Score=44.95 Aligned_cols=23 Identities=30% Similarity=0.391 Sum_probs=20.0
Q ss_pred CceEEeeccchHHHHHHHHHHhc
Q 039671 47 GRVFIGGGSAGGNIAHTLAFQVG 69 (195)
Q Consensus 47 ~~i~l~G~S~Gg~la~~~a~~~~ 69 (195)
.+|.|.|||+||.||...|....
T Consensus 318 ~SItVTGHSLGGALAtLaA~DIa 340 (525)
T PLN03037 318 VSLTITGHSLGGALALLNAYEAA 340 (525)
T ss_pred ceEEEeccCHHHHHHHHHHHHHH
Confidence 47999999999999998887654
No 200
>PLN02753 triacylglycerol lipase
Probab=95.45 E-value=0.071 Score=44.62 Aligned_cols=48 Identities=17% Similarity=0.273 Sum_probs=32.3
Q ss_pred chHHHHHHHHHHHHHhccCCCCCCCCCCCCCCCceEEeeccchHHHHHHHHHHhcc
Q 039671 15 ACYEDSWAALNWVASHAGGNGPEPWLNDHADFGRVFIGGGSAGGNIAHTLAFQVGS 70 (195)
Q Consensus 15 ~~~~D~~~a~~~l~~~~~~~~~~~~~~~~~d~~~i~l~G~S~Gg~la~~~a~~~~~ 70 (195)
..-+++...++.+.+....-+ ....+|.|.|||.||.||...|.....
T Consensus 288 S~reQVl~eVkrLl~~Y~~e~--------~~~~sItVTGHSLGGALAtLaA~Dla~ 335 (531)
T PLN02753 288 SAREQILTEVKRLVEEHGDDD--------DSDLSITVTGHSLGGALAILSAYDIAE 335 (531)
T ss_pred hHHHHHHHHHHHHHHHccccc--------CCCceEEEEccCHHHHHHHHHHHHHHH
Confidence 345666666666665532111 124589999999999999988876543
No 201
>PLN02324 triacylglycerol lipase
Probab=95.37 E-value=0.069 Score=43.52 Aligned_cols=43 Identities=14% Similarity=0.054 Sum_probs=31.0
Q ss_pred chHHHHHHHHHHHHHhccCCCCCCCCCCCCCCCceEEeeccchHHHHHHHHHHh
Q 039671 15 ACYEDSWAALNWVASHAGGNGPEPWLNDHADFGRVFIGGGSAGGNIAHTLAFQV 68 (195)
Q Consensus 15 ~~~~D~~~a~~~l~~~~~~~~~~~~~~~~~d~~~i~l~G~S~Gg~la~~~a~~~ 68 (195)
..-+++...++.+.+... ...-+|.+.|||.||.||...|...
T Consensus 194 SareqVl~eV~~L~~~Yp-----------~e~~sItvTGHSLGGALAtLaA~dl 236 (415)
T PLN02324 194 SAQEQVQGELKRLLELYK-----------NEEISITFTGHSLGAVMSVLSAADL 236 (415)
T ss_pred HHHHHHHHHHHHHHHHCC-----------CCCceEEEecCcHHHHHHHHHHHHH
Confidence 345666777777776532 1124799999999999999888765
No 202
>KOG4569 consensus Predicted lipase [Lipid transport and metabolism]
Probab=95.35 E-value=0.068 Score=42.70 Aligned_cols=58 Identities=21% Similarity=0.118 Sum_probs=39.7
Q ss_pred HHHHHHHHHHHHhccCCCCCCCCCCCCCCCceEEeeccchHHHHHHHHHHhccCCCCCCceeEEEeecccc
Q 039671 18 EDSWAALNWVASHAGGNGPEPWLNDHADFGRVFIGGGSAGGNIAHTLAFQVGSIGLPRVKLVGVIMVHPFF 88 (195)
Q Consensus 18 ~D~~~a~~~l~~~~~~~~~~~~~~~~~d~~~i~l~G~S~Gg~la~~~a~~~~~~~~~~~~~~~~i~~~p~~ 88 (195)
..+.+.++.|.+... .-+|.+.|||+||.||...|......++.......++.+..+-
T Consensus 155 ~~~~~~~~~L~~~~~-------------~~~i~vTGHSLGgAlA~laa~~i~~~~~~~~~~v~v~tFG~PR 212 (336)
T KOG4569|consen 155 SGLDAELRRLIELYP-------------NYSIWVTGHSLGGALASLAALDLVKNGLKTSSPVKVYTFGQPR 212 (336)
T ss_pred HHHHHHHHHHHHhcC-------------CcEEEEecCChHHHHHHHHHHHHHHcCCCCCCceEEEEecCCC
Confidence 455666666766643 3479999999999999988888766554322445566665443
No 203
>PF01083 Cutinase: Cutinase; InterPro: IPR000675 Aerial plant organs are protected by a cuticle composed of an insoluble polymeric structural compound, cutin, which is a polyester composed of hydroxy and hydroxyepoxy fatty acids []. Plant pathogenic fungi produce extracellular degradative enzymes [] that play an important role in pathogenesis. They include cutinase, which hydrolyses cutin, facilitating fungus penetration through the cuticle. Inhibition of the enzyme can prevent fungal infection through intact cuticles. Cutin monomers released from the cuticle by small amounts of cutinase on fungal spore surfaces can greatly increase the amount of cutinase secreted by the spore, the mechanism for which process is as yet unknown [, ]. Cutinase is a serine esterase containing the classical Ser, His, Asp triad of serine hydrolases []. The protein belongs to the alpha-beta class, with a central beta-sheet of 5 parallel strands covered by 5 helices on either side of the sheet. The active site cleft is partly covered by 2 thin bridges formed by amino acid side chains, by contrast with the hydrophobic lid possessed by other lipases []. The protein also contains 2 disulphide bridges, which are essential for activity, their cleavage resulting in complete loss of enzymatic activity []. Two cutinase-like proteins (MtCY39.35 and MtCY339.08c) have been found in the genome of the bacteria Mycobacterium tuberculosis.; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 1XZK_A 1XZA_A 1CUD_C 1XZI_A 1XZH_A 1CUF_A 1FFD_A 2CUT_A 1FFA_A 1CUA_A ....
Probab=95.24 E-value=0.087 Score=38.11 Aligned_cols=45 Identities=11% Similarity=0.090 Sum_probs=31.4
Q ss_pred CCCCceEEeeccchHHHHHHHHHH--hccCCCCCCceeEEEeeccccCC
Q 039671 44 ADFGRVFIGGGSAGGNIAHTLAFQ--VGSIGLPRVKLVGVIMVHPFFGG 90 (195)
Q Consensus 44 ~d~~~i~l~G~S~Gg~la~~~a~~--~~~~~~~~~~~~~~i~~~p~~~~ 90 (195)
....+|+|+|+|.||.++..++.. ..... ..++.+++++.-+...
T Consensus 78 CP~~kivl~GYSQGA~V~~~~~~~~~l~~~~--~~~I~avvlfGdP~~~ 124 (179)
T PF01083_consen 78 CPNTKIVLAGYSQGAMVVGDALSGDGLPPDV--ADRIAAVVLFGDPRRG 124 (179)
T ss_dssp STTSEEEEEEETHHHHHHHHHHHHTTSSHHH--HHHEEEEEEES-TTTB
T ss_pred CCCCCEEEEecccccHHHHHHHHhccCChhh--hhhEEEEEEecCCccc
Confidence 335699999999999999987766 11100 1389999999855443
No 204
>PLN02162 triacylglycerol lipase
Probab=95.16 E-value=0.049 Score=44.90 Aligned_cols=23 Identities=22% Similarity=0.275 Sum_probs=19.1
Q ss_pred CCceEEeeccchHHHHHHHHHHh
Q 039671 46 FGRVFIGGGSAGGNIAHTLAFQV 68 (195)
Q Consensus 46 ~~~i~l~G~S~Gg~la~~~a~~~ 68 (195)
..++.+.|||.||.||...+...
T Consensus 277 ~~kliVTGHSLGGALAtLaAa~L 299 (475)
T PLN02162 277 NLKYILTGHSLGGALAALFPAIL 299 (475)
T ss_pred CceEEEEecChHHHHHHHHHHHH
Confidence 46899999999999998776543
No 205
>PLN02761 lipase class 3 family protein
Probab=94.94 E-value=0.11 Score=43.53 Aligned_cols=48 Identities=17% Similarity=0.220 Sum_probs=32.5
Q ss_pred chHHHHHHHHHHHHHhccCCCCCCCCCCCCCCCceEEeeccchHHHHHHHHHHhc
Q 039671 15 ACYEDSWAALNWVASHAGGNGPEPWLNDHADFGRVFIGGGSAGGNIAHTLAFQVG 69 (195)
Q Consensus 15 ~~~~D~~~a~~~l~~~~~~~~~~~~~~~~~d~~~i~l~G~S~Gg~la~~~a~~~~ 69 (195)
..-+++...++.+.+...+.++ ....+|.|.|||.||.||...|....
T Consensus 269 SaR~qVl~eV~rL~~~Y~~~~k-------~e~~sItVTGHSLGGALAtLaA~DIa 316 (527)
T PLN02761 269 SAREQVLAEVKRLVEYYGTEEE-------GHEISITVTGHSLGASLALVSAYDIA 316 (527)
T ss_pred hHHHHHHHHHHHHHHhcccccC-------CCCceEEEeccchHHHHHHHHHHHHH
Confidence 4456677777777665421110 12347999999999999998887654
No 206
>PF07082 DUF1350: Protein of unknown function (DUF1350); InterPro: IPR010765 This family consists of several hypothetical proteins from both cyanobacteria and plants. Members of this family are typically around 250 residues in length. The function of this family is unknown but the species distribution indicates that the family may be involved in photosynthesis.
Probab=94.88 E-value=0.63 Score=35.35 Aligned_cols=45 Identities=16% Similarity=0.077 Sum_probs=33.7
Q ss_pred CCCCEEEEEcCCccchhhHHHHHHHHHhcCCCccEEEEEecCCCcccc
Q 039671 125 GCERVLIFVAEKDFLKPVAMNYYEDLKKSGWKGTVELVETHGEGHSFY 172 (195)
Q Consensus 125 ~~pp~~i~~g~~D~l~~~~~~~~~~l~~~~~g~~~~~~~~~g~~H~f~ 172 (195)
..+.++++-=++|.+ +++..+.+.|++.. ..-++....+| .|.-.
T Consensus 162 ~~~rnLLIkF~~D~i-Dqt~~L~~~L~~r~-~~~~~~~~L~G-~HLTP 206 (250)
T PF07082_consen 162 QVRRNLLIKFNDDDI-DQTDELEQILQQRF-PDMVSIQTLPG-NHLTP 206 (250)
T ss_pred CCccceEEEecCCCc-cchHHHHHHHhhhc-cccceEEeCCC-CCCCc
Confidence 356789998888877 78999999999873 23466777887 89543
No 207
>PLN02847 triacylglycerol lipase
Probab=94.77 E-value=0.12 Score=43.87 Aligned_cols=38 Identities=21% Similarity=0.280 Sum_probs=26.3
Q ss_pred CceEEeeccchHHHHHHHHHHhcc-CCCCCCceeEEEeeccc
Q 039671 47 GRVFIGGGSAGGNIAHTLAFQVGS-IGLPRVKLVGVIMVHPF 87 (195)
Q Consensus 47 ~~i~l~G~S~Gg~la~~~a~~~~~-~~~~~~~~~~~i~~~p~ 87 (195)
-+++|+|||.||.+|..++..... ..++ .+. ++.|+|.
T Consensus 251 YkLVITGHSLGGGVAALLAilLRe~~~fs--si~-CyAFgPp 289 (633)
T PLN02847 251 FKIKIVGHSLGGGTAALLTYILREQKEFS--STT-CVTFAPA 289 (633)
T ss_pred CeEEEeccChHHHHHHHHHHHHhcCCCCC--Cce-EEEecCc
Confidence 489999999999999988877653 2222 333 4555553
No 208
>TIGR03502 lipase_Pla1_cef extracellular lipase, Pla-1/cef family. Members of this protein family are bacterial lipoproteins largely from the Gammaproteobacteria. Characterized members are expressed in extracellularly and have esterase activity. Members include the lipase Pla-1 from Aeromonas hydrophila (AF092033) and CHO cell elongation factor (cef) from Vibrio hollisae
Probab=94.61 E-value=0.062 Score=47.44 Aligned_cols=51 Identities=16% Similarity=0.075 Sum_probs=35.2
Q ss_pred CCCchHHHHHHHHHHHH------HhccCCCCCCCCCCCCCCCceEEeeccchHHHHHHHHHHhc
Q 039671 12 PIPACYEDSWAALNWVA------SHAGGNGPEPWLNDHADFGRVFIGGGSAGGNIAHTLAFQVG 69 (195)
Q Consensus 12 ~~p~~~~D~~~a~~~l~------~~~~~~~~~~~~~~~~d~~~i~l~G~S~Gg~la~~~a~~~~ 69 (195)
.+...+.|+......+. +.....+ ..+..+++++|||+||.++..++...+
T Consensus 521 n~rQ~v~Dll~L~~~l~~~~~~~~~~~~~~-------~~~~~~V~~lGHSLGgiig~~~~~~an 577 (792)
T TIGR03502 521 NLRQSILDLLGLRLSLNGSALAGAPLSGIN-------VIDGSKVSFLGHSLGGIVGTSFIAYAN 577 (792)
T ss_pred CHHHHHHHHHHHHHHHhccccccccccccc-------CCCCCcEEEEecCHHHHHHHHHHHhcC
Confidence 45666777777777666 2111111 146789999999999999998887644
No 209
>PF07519 Tannase: Tannase and feruloyl esterase; InterPro: IPR011118 This family includes fungal tannase [] and feruloyl esterase [, ]. It also includes several bacterial homologues of unknown function.
Probab=94.24 E-value=0.1 Score=43.64 Aligned_cols=64 Identities=17% Similarity=0.237 Sum_probs=46.4
Q ss_pred CEEEEEcCCccchh--hHHHHHHHHHhcCCC------ccEEEEEecCCCccccccCCCchHHHHHHHHHHHHHHh
Q 039671 128 RVLIFVAEKDFLKP--VAMNYYEDLKKSGWK------GTVELVETHGEGHSFYFDNLKCEKAVELINKFVSFITQ 194 (195)
Q Consensus 128 p~~i~~g~~D~l~~--~~~~~~~~l~~~~~g------~~~~~~~~~g~~H~f~~~~~~~~~~~~~~~~~~~fl~~ 194 (195)
++++.||..|.+++ .+..+++++.+.-.+ .-+++.++||++|..--. . +.....+..+.+|+++
T Consensus 355 KLI~~HG~aD~~I~p~~ti~YY~~V~~~~g~~~~~v~dF~RlF~vPGm~HC~gG~-g--~~~~d~l~aL~~WVE~ 426 (474)
T PF07519_consen 355 KLILYHGWADPLIPPQGTIDYYERVVARMGGALADVDDFYRLFMVPGMGHCGGGP-G--PDPFDALTALVDWVEN 426 (474)
T ss_pred eEEEEecCCCCccCCCcHHHHHHHHHHhcccccccccceeEEEecCCCcccCCCC-C--CCCCCHHHHHHHHHhC
Confidence 79999999999884 488888887765212 247999999999954322 1 1223788888999875
No 210
>smart00824 PKS_TE Thioesterase. Peptide synthetases are involved in the non-ribosomal synthesis of peptide antibiotics. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates. There are also modules within the peptide synthetases that also share this similarity. With respect to antibiotic production, thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Thioesterases (non-integrated) have molecular masses of 25-29 kDa.
Probab=94.18 E-value=0.32 Score=35.03 Aligned_cols=38 Identities=24% Similarity=0.395 Sum_probs=28.1
Q ss_pred CCceEEeeccchHHHHHHHHHHhccCCCCCCceeEEEeecc
Q 039671 46 FGRVFIGGGSAGGNIAHTLAFQVGSIGLPRVKLVGVIMVHP 86 (195)
Q Consensus 46 ~~~i~l~G~S~Gg~la~~~a~~~~~~~~~~~~~~~~i~~~p 86 (195)
..++.++|||+||.++..++.+....+. .+.+++++.+
T Consensus 63 ~~~~~l~g~s~Gg~~a~~~a~~l~~~~~---~~~~l~~~~~ 100 (212)
T smart00824 63 GRPFVLVGHSSGGLLAHAVAARLEARGI---PPAAVVLLDT 100 (212)
T ss_pred CCCeEEEEECHHHHHHHHHHHHHHhCCC---CCcEEEEEcc
Confidence 4579999999999999988887654332 4666666543
No 211
>KOG2369 consensus Lecithin:cholesterol acyltransferase (LCAT)/Acyl-ceramide synthase [Lipid transport and metabolism]
Probab=94.16 E-value=0.09 Score=43.26 Aligned_cols=26 Identities=19% Similarity=0.042 Sum_probs=21.8
Q ss_pred CCCceEEeeccchHHHHHHHHHHhcc
Q 039671 45 DFGRVFIGGGSAGGNIAHTLAFQVGS 70 (195)
Q Consensus 45 d~~~i~l~G~S~Gg~la~~~a~~~~~ 70 (195)
..++|+|++|||||.+.++.......
T Consensus 180 G~kkVvlisHSMG~l~~lyFl~w~~~ 205 (473)
T KOG2369|consen 180 GGKKVVLISHSMGGLYVLYFLKWVEA 205 (473)
T ss_pred CCCceEEEecCCccHHHHHHHhcccc
Confidence 34899999999999999988776654
No 212
>PF01674 Lipase_2: Lipase (class 2); InterPro: IPR002918 Lipases or triacylglycerol acylhydrolases hydrolyse ester bonds in triacylglycerol giving diacylglycerol, monoacylglycerol, glycerol and free fatty acids []. This group of lipases has been called class 2 as they are not clearly related to other lipase families, and includes LipA and LipB from Bacillus subtilis [] and uncharacterised proteins from Caenorhabditis.; PDB: 2VTV_B 2X76_A 2X5X_A 2QXU_A 3QMM_A 1I6W_A 3D2C_J 2QXT_B 1R50_A 1T2N_A ....
Probab=93.18 E-value=0.17 Score=37.92 Aligned_cols=37 Identities=27% Similarity=0.171 Sum_probs=26.9
Q ss_pred HHHHHHHHHHHHhccCCCCCCCCCCCCCCCceEEeeccchHHHHHHHHHHh
Q 039671 18 EDSWAALNWVASHAGGNGPEPWLNDHADFGRVFIGGGSAGGNIAHTLAFQV 68 (195)
Q Consensus 18 ~D~~~a~~~l~~~~~~~~~~~~~~~~~d~~~i~l~G~S~Gg~la~~~a~~~ 68 (195)
.++.++++-+++. ... +|=|+|||+||.++.++....
T Consensus 60 ~~l~~fI~~Vl~~-------------TGa-kVDIVgHS~G~~iaR~yi~~~ 96 (219)
T PF01674_consen 60 KQLRAFIDAVLAY-------------TGA-KVDIVGHSMGGTIARYYIKGG 96 (219)
T ss_dssp HHHHHHHHHHHHH-------------HT---EEEEEETCHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHh-------------hCC-EEEEEEcCCcCHHHHHHHHHc
Confidence 4666777766655 445 899999999999999887654
No 213
>COG2939 Carboxypeptidase C (cathepsin A) [Amino acid transport and metabolism]
Probab=92.85 E-value=0.13 Score=42.72 Aligned_cols=70 Identities=16% Similarity=0.196 Sum_probs=50.7
Q ss_pred CCCchHHHHHHHHHHHHHhccCCCCCCCCCCCCCCCceEEeeccchHHHHHHHHHHhccCCCCCCceeEEEeeccccCCC
Q 039671 12 PIPACYEDSWAALNWVASHAGGNGPEPWLNDHADFGRVFIGGGSAGGNIAHTLAFQVGSIGLPRVKLVGVIMVHPFFGGT 91 (195)
Q Consensus 12 ~~p~~~~D~~~a~~~l~~~~~~~~~~~~~~~~~d~~~i~l~G~S~Gg~la~~~a~~~~~~~~~~~~~~~~i~~~p~~~~~ 91 (195)
.+-..-+|+..+.+.+.+...++. -..++.+|+|.|.||+-+..+|..+....+ .++++++++++++..
T Consensus 171 d~~~~~~D~~~~~~~f~~~fp~~~--------r~~~~~~L~GESYgg~yip~~A~~L~~~~~---~~~~~~nlssvlign 239 (498)
T COG2939 171 DFEGAGKDVYSFLRLFFDKFPHYA--------RLLSPKFLAGESYGGHYIPVFAHELLEDNI---ALNGNVNLSSVLIGN 239 (498)
T ss_pred chhccchhHHHHHHHHHHHHHHHh--------hhcCceeEeeccccchhhHHHHHHHHHhcc---ccCCceEeeeeeecC
Confidence 456777899998888877766554 345689999999999999999888765331 356666666665543
Q ss_pred C
Q 039671 92 S 92 (195)
Q Consensus 92 ~ 92 (195)
.
T Consensus 240 g 240 (498)
T COG2939 240 G 240 (498)
T ss_pred C
Confidence 3
No 214
>COG3946 VirJ Type IV secretory pathway, VirJ component [Intracellular trafficking and secretion]
Probab=92.41 E-value=0.18 Score=40.83 Aligned_cols=113 Identities=21% Similarity=0.196 Sum_probs=62.1
Q ss_pred hHHHHHHHHHHHHHhccCCCCCCCCCCCCCCCceEEeeccchHHHHHHHHHHhccCCCC----------CCceeEEEeec
Q 039671 16 CYEDSWAALNWVASHAGGNGPEPWLNDHADFGRVFIGGGSAGGNIAHTLAFQVGSIGLP----------RVKLVGVIMVH 85 (195)
Q Consensus 16 ~~~D~~~a~~~l~~~~~~~~~~~~~~~~~d~~~i~l~G~S~Gg~la~~~a~~~~~~~~~----------~~~~~~~i~~~ 85 (195)
.-.|+...+++-..+ ....++.|+|+|.|+-+--..--+++..... ..+...-|.+.
T Consensus 308 ~a~Dl~r~i~~y~~~-------------w~~~~~~liGySfGADvlP~~~n~L~~~~r~~v~~~~ll~l~~~~~fe~~v~ 374 (456)
T COG3946 308 IAADLSRLIRFYARR-------------WGAKRVLLIGYSFGADVLPFAYNRLPPATRQRVRMVSLLGLGRTADFEISVE 374 (456)
T ss_pred HHHHHHHHHHHHHHh-------------hCcceEEEEeecccchhhHHHHHhCCHHHHHHHHHHHHHhccccceEEEEEe
Confidence 346777777777665 4578999999999996543332222210000 01334556667
Q ss_pred cccCCCCccHHHHHHhhCCCCCCCCCCCCCCChhhhcccCCCCEEEEEcCCc--cchhhHHHHHHHHHhcCCCccEEEEE
Q 039671 86 PFFGGTSPEEDEMWLYMCPTNGGLQDPRLKPPAEDLARLGCERVLIFVAEKD--FLKPVAMNYYEDLKKSGWKGTVELVE 163 (195)
Q Consensus 86 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~pp~~i~~g~~D--~l~~~~~~~~~~l~~~~~g~~~~~~~ 163 (195)
+|+..... . ....-| .+..++.-.++.++|++| ..++ .|+.. .++.+.
T Consensus 375 gWlg~~~~------------g----~~~~~~---~~~~l~~~~v~CiYG~~e~d~~Cp-------~l~~~----~~~~v~ 424 (456)
T COG3946 375 GWLGMAGE------------G----AGDVVP---DIAKLPLARVQCIYGQEEKDTACP-------SLKAK----GVDTVK 424 (456)
T ss_pred eeeccCCc------------C----CCCcch---hhhhCCcceeEEEecCccccccCC-------cchhh----cceeEe
Confidence 77665332 0 011122 333333235888899775 3443 34444 347778
Q ss_pred ecCCCcccc
Q 039671 164 THGEGHSFY 172 (195)
Q Consensus 164 ~~g~~H~f~ 172 (195)
.||+.| |+
T Consensus 425 lpGgHH-Fd 432 (456)
T COG3946 425 LPGGHH-FD 432 (456)
T ss_pred cCCCcc-cC
Confidence 999655 65
No 215
>PF09994 DUF2235: Uncharacterized alpha/beta hydrolase domain (DUF2235); InterPro: IPR018712 This domain has no known function.
Probab=92.18 E-value=0.37 Score=37.38 Aligned_cols=47 Identities=21% Similarity=0.254 Sum_probs=36.2
Q ss_pred chHHHHHHHHHHHHHhccCCCCCCCCCCCCCCCceEEeeccchHHHHHHHHHHhccCCC
Q 039671 15 ACYEDSWAALNWVASHAGGNGPEPWLNDHADFGRVFIGGGSAGGNIAHTLAFQVGSIGL 73 (195)
Q Consensus 15 ~~~~D~~~a~~~l~~~~~~~~~~~~~~~~~d~~~i~l~G~S~Gg~la~~~a~~~~~~~~ 73 (195)
..-..+..++.+|.++. -..++|+|+|+|-|+..|-.++-.....++
T Consensus 72 g~~~~I~~ay~~l~~~~------------~~gd~I~lfGFSRGA~~AR~~a~~i~~~Gl 118 (277)
T PF09994_consen 72 GIEARIRDAYRFLSKNY------------EPGDRIYLFGFSRGAYTARAFANMIDKIGL 118 (277)
T ss_pred chHHHHHHHHHHHHhcc------------CCcceEEEEecCccHHHHHHHHHHHhhcCC
Confidence 34567788899988775 245689999999999999998877754443
No 216
>COG1075 LipA Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold [General function prediction only]
Probab=91.05 E-value=0.64 Score=37.18 Aligned_cols=61 Identities=15% Similarity=0.090 Sum_probs=41.8
Q ss_pred hHHHHHHHHHHHHHhccCCCCCCCCCCCCCCCceEEeeccchHHHHHHHHHHhccCCCCCCceeEEEeeccccCC
Q 039671 16 CYEDSWAALNWVASHAGGNGPEPWLNDHADFGRVFIGGGSAGGNIAHTLAFQVGSIGLPRVKLVGVIMVHPFFGG 90 (195)
Q Consensus 16 ~~~D~~~a~~~l~~~~~~~~~~~~~~~~~d~~~i~l~G~S~Gg~la~~~a~~~~~~~~~~~~~~~~i~~~p~~~~ 90 (195)
...+.....+++.+-.... ..+++.++|||+||-++.++....... ..++.++.++++-..
T Consensus 106 ~~~~~~ql~~~V~~~l~~~----------ga~~v~LigHS~GG~~~ry~~~~~~~~----~~V~~~~tl~tp~~G 166 (336)
T COG1075 106 LAVRGEQLFAYVDEVLAKT----------GAKKVNLIGHSMGGLDSRYYLGVLGGA----NRVASVVTLGTPHHG 166 (336)
T ss_pred ccccHHHHHHHHHHHHhhc----------CCCceEEEeecccchhhHHHHhhcCcc----ceEEEEEEeccCCCC
Confidence 3344555566666554433 358999999999999999888777532 267888877766443
No 217
>PRK10252 entF enterobactin synthase subunit F; Provisional
Probab=90.62 E-value=0.96 Score=42.55 Aligned_cols=37 Identities=22% Similarity=0.311 Sum_probs=28.9
Q ss_pred CceEEeeccchHHHHHHHHHHhccCCCCCCceeEEEeecc
Q 039671 47 GRVFIGGGSAGGNIAHTLAFQVGSIGLPRVKLVGVIMVHP 86 (195)
Q Consensus 47 ~~i~l~G~S~Gg~la~~~a~~~~~~~~~~~~~~~~i~~~p 86 (195)
.++.++|||+||.+|..++.+....+ .++..++++.+
T Consensus 1133 ~p~~l~G~S~Gg~vA~e~A~~l~~~~---~~v~~l~l~~~ 1169 (1296)
T PRK10252 1133 GPYHLLGYSLGGTLAQGIAARLRARG---EEVAFLGLLDT 1169 (1296)
T ss_pred CCEEEEEechhhHHHHHHHHHHHHcC---CceeEEEEecC
Confidence 47999999999999999998765432 26777777665
No 218
>COG3673 Uncharacterized conserved protein [Function unknown]
Probab=90.24 E-value=0.7 Score=36.51 Aligned_cols=41 Identities=17% Similarity=0.079 Sum_probs=34.4
Q ss_pred HHHHHHHHHHHHHhccCCCCCCCCCCCCCCCceEEeeccchHHHHHHHHHHhc
Q 039671 17 YEDSWAALNWVASHAGGNGPEPWLNDHADFGRVFIGGGSAGGNIAHTLAFQVG 69 (195)
Q Consensus 17 ~~D~~~a~~~l~~~~~~~~~~~~~~~~~d~~~i~l~G~S~Gg~la~~~a~~~~ 69 (195)
.+-+..|+.||.++.+ -.++|+..|+|-|++.|-.++....
T Consensus 104 ~~nI~~AYrFL~~~ye------------pGD~Iy~FGFSRGAf~aRVlagmir 144 (423)
T COG3673 104 VQNIREAYRFLIFNYE------------PGDEIYAFGFSRGAFSARVLAGMIR 144 (423)
T ss_pred HHHHHHHHHHHHHhcC------------CCCeEEEeeccchhHHHHHHHHHHH
Confidence 4678899999999964 4579999999999999988887653
No 219
>PF08237 PE-PPE: PE-PPE domain; InterPro: IPR013228 The human pathogen Mycobacterium tuberculosis harbours a large number of genes that encode proteins whose N-termini contain the characteristic motifs Pro-Glu (PE) or Pro-Pro-Glu (PPE). A subgroup of the PE proteins contains polymorphic GC-rich sequences (PGRS), while a subgroup of the PPE proteins contains major polymorphic tandem repeats (MPTR). The function of most of these proteins remains unknown []. However, the PE_PGRS proteins from Mycobacterium marinum are secreted by components of the ESX-5 system that belongs to the recently defined type VII secretion systems []. It has also been reported that the PE_PGRS family of proteins contains multiple calcium-binding and glycine-rich sequence motifs GGXGXD/NXUX. This sequence repeat constitutes a calcium-binding parallel beta-roll or parallel beta-helix structure and is found in RTX toxins secreted by many Gram-negative bacteria []. This domain is found C-terminal to the PE (IPR000084 from INTERPRO) and PPE (IPR000030 from INTERPRO) domains. The secondary structure of this domain is predicted to be a mixture of alpha helices and beta strands [].
Probab=89.68 E-value=2.8 Score=31.50 Aligned_cols=27 Identities=22% Similarity=0.192 Sum_probs=22.7
Q ss_pred CCCceEEeeccchHHHHHHHHHHhccC
Q 039671 45 DFGRVFIGGGSAGGNIAHTLAFQVGSI 71 (195)
Q Consensus 45 d~~~i~l~G~S~Gg~la~~~a~~~~~~ 71 (195)
..++++|+|+|.|+.+|.....+....
T Consensus 46 ~~~~vvV~GySQGA~Va~~~~~~l~~~ 72 (225)
T PF08237_consen 46 AGGPVVVFGYSQGAVVASNVLRRLAAD 72 (225)
T ss_pred CCCCEEEEEECHHHHHHHHHHHHHHhc
Confidence 567899999999999999888777653
No 220
>KOG1551 consensus Uncharacterized conserved protein [Function unknown]
Probab=89.67 E-value=1.5 Score=33.74 Aligned_cols=24 Identities=29% Similarity=0.447 Sum_probs=19.1
Q ss_pred CCceEEeeccchHHHHHHHHHHhc
Q 039671 46 FGRVFIGGGSAGGNIAHTLAFQVG 69 (195)
Q Consensus 46 ~~~i~l~G~S~Gg~la~~~a~~~~ 69 (195)
..++.|+|-||||.+|-.+...++
T Consensus 194 ~g~~~~~g~Smgg~~a~~vgS~~q 217 (371)
T KOG1551|consen 194 LGNLNLVGRSMGGDIANQVGSLHQ 217 (371)
T ss_pred cccceeeeeecccHHHHhhcccCC
Confidence 347999999999999887766443
No 221
>PF10605 3HBOH: 3HB-oligomer hydrolase (3HBOH) ; InterPro: IPR016582 This entry represents a group of predicted D-(-)-3-hydroxybutyrate oligomer hydrolases (also known as 3HB-oligomer hydrolase), which function in the degradation of poly-3-hydroxybutyrate (PHB). These enzymes catalyse the hydrolysis of D(-)-3-hydroxybutyrate oligomers (3HB-oligomers) into 3HB-monomers [, ].; GO: 0047989 hydroxybutyrate-dimer hydrolase activity, 0019605 butyrate metabolic process, 0005615 extracellular space
Probab=89.14 E-value=1.5 Score=37.53 Aligned_cols=66 Identities=14% Similarity=0.122 Sum_probs=45.2
Q ss_pred CEEEEEcCCccchh---hHHHHHHHHHhc-CCCccEEEEEecCCCcccccc---CC-------CchHHHHHHHHHHHHHH
Q 039671 128 RVLIFVAEKDFLKP---VAMNYYEDLKKS-GWKGTVELVETHGEGHSFYFD---NL-------KCEKAVELINKFVSFIT 193 (195)
Q Consensus 128 p~~i~~g~~D~l~~---~~~~~~~~l~~~-~~g~~~~~~~~~g~~H~f~~~---~~-------~~~~~~~~~~~~~~fl~ 193 (195)
|++|+||..|.+++ .++.+....++. |.+-..+++.+.++.| |+.+ .. .-....+.++.+..+|+
T Consensus 557 PaIiVhGR~DaLlPvnh~Sr~Y~~ln~~~eG~~s~lrYyeV~naqH-fDaf~~~pG~~~r~VPlh~Y~~qALd~M~a~L~ 635 (690)
T PF10605_consen 557 PAIIVHGRSDALLPVNHTSRPYLGLNRQVEGRASRLRYYEVTNAQH-FDAFLDFPGFDTRFVPLHPYFFQALDLMWAHLK 635 (690)
T ss_pred ceEEEecccceecccCCCchHHHHHhhhhcccccceeEEEecCCee-chhhccCCCCCcccccccHHHHHHHHHHHHHhh
Confidence 79999999998774 366666655543 3134689999999999 6543 11 11355777888888876
Q ss_pred h
Q 039671 194 Q 194 (195)
Q Consensus 194 ~ 194 (195)
+
T Consensus 636 ~ 636 (690)
T PF10605_consen 636 S 636 (690)
T ss_pred c
Confidence 4
No 222
>PF05576 Peptidase_S37: PS-10 peptidase S37; InterPro: IPR008761 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. These group of serine peptidases belong to MEROPS peptidase family S37 (clan SC). The members of this group of secreted peptidases are restricted to bacteria. In Streptomyces lividans the peptidase removes tripeptides from the N terminus of extracellular proteins (tripeptidyl aminopeptidase,Tap) [, ].
Probab=88.95 E-value=0.42 Score=38.96 Aligned_cols=61 Identities=15% Similarity=0.158 Sum_probs=40.2
Q ss_pred CCCEEEEEcCCccchhhHHHHHHHHHhcCCCccEEEEEecCCCccccccCCCchHHHHHHHHHHHHH
Q 039671 126 CERVLIFVAEKDFLKPVAMNYYEDLKKSGWKGTVELVETHGEGHSFYFDNLKCEKAVELINKFVSFI 192 (195)
Q Consensus 126 ~pp~~i~~g~~D~l~~~~~~~~~~l~~~~~g~~~~~~~~~g~~H~f~~~~~~~~~~~~~~~~~~~fl 192 (195)
-+.+++++|++|+-..+...+-+ . +.+....+.||++|+-.+..-..++..+++..+.+|-
T Consensus 351 ~~rmlFVYG~nDPW~A~~f~l~~----g--~~ds~v~~~PggnHga~I~~L~~~~r~~a~a~l~~Wa 411 (448)
T PF05576_consen 351 GPRMLFVYGENDPWSAEPFRLGK----G--KRDSYVFTAPGGNHGARIAGLPEAERAEATARLRRWA 411 (448)
T ss_pred CCeEEEEeCCCCCcccCccccCC----C--CcceEEEEcCCCcccccccCCCHHHHHHHHHHHHHHc
Confidence 35799999999987755444311 1 3466778889999976554322335566667777774
No 223
>COG5153 CVT17 Putative lipase essential for disintegration of autophagic bodies inside the vacuole [Intracellular trafficking and secretion / Lipid metabolism]
Probab=88.73 E-value=1.1 Score=34.78 Aligned_cols=23 Identities=35% Similarity=0.583 Sum_probs=19.9
Q ss_pred CCceEEeeccchHHHHHHHHHHh
Q 039671 46 FGRVFIGGGSAGGNIAHTLAFQV 68 (195)
Q Consensus 46 ~~~i~l~G~S~Gg~la~~~a~~~ 68 (195)
-.+|.|.|||.||.+|..+..+.
T Consensus 275 da~iwlTGHSLGGa~AsLlG~~f 297 (425)
T COG5153 275 DARIWLTGHSLGGAIASLLGIRF 297 (425)
T ss_pred CceEEEeccccchHHHHHhcccc
Confidence 35899999999999998887775
No 224
>KOG4540 consensus Putative lipase essential for disintegration of autophagic bodies inside the vacuole [Intracellular trafficking, secretion, and vesicular transport; Lipid transport and metabolism]
Probab=88.73 E-value=1.1 Score=34.78 Aligned_cols=23 Identities=35% Similarity=0.583 Sum_probs=19.9
Q ss_pred CCceEEeeccchHHHHHHHHHHh
Q 039671 46 FGRVFIGGGSAGGNIAHTLAFQV 68 (195)
Q Consensus 46 ~~~i~l~G~S~Gg~la~~~a~~~ 68 (195)
-.+|.|.|||.||.+|..+..+.
T Consensus 275 da~iwlTGHSLGGa~AsLlG~~f 297 (425)
T KOG4540|consen 275 DARIWLTGHSLGGAIASLLGIRF 297 (425)
T ss_pred CceEEEeccccchHHHHHhcccc
Confidence 35899999999999998887775
No 225
>PF12242 Eno-Rase_NADH_b: NAD(P)H binding domain of trans-2-enoyl-CoA reductase; PDB: 3ZU5_A 3ZU3_A 3ZU4_A 3ZU2_A 3S8M_A.
Probab=88.28 E-value=1.8 Score=26.52 Aligned_cols=42 Identities=19% Similarity=0.207 Sum_probs=28.8
Q ss_pred HHHHHHHHHHHHHhccCCCCCCCCCCCCCCCceEEeeccchHHHHHHHHHHh
Q 039671 17 YEDSWAALNWVASHAGGNGPEPWLNDHADFGRVFIGGGSAGGNIAHTLAFQV 68 (195)
Q Consensus 17 ~~D~~~a~~~l~~~~~~~~~~~~~~~~~d~~~i~l~G~S~Gg~la~~~a~~~ 68 (195)
-+.+..-++|++++..- -.++++.|+|.|.|=.||..++..-
T Consensus 20 ~~~V~~qI~yvk~~~~~----------~GpK~VLViGaStGyGLAsRIa~aF 61 (78)
T PF12242_consen 20 ARNVENQIEYVKSQGKI----------NGPKKVLVIGASTGYGLASRIAAAF 61 (78)
T ss_dssp HHHHHHHHHHHHHC-------------TS-SEEEEES-SSHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcCCC----------CCCceEEEEecCCcccHHHHHHHHh
Confidence 35677778888876432 2468999999999999998666653
No 226
>KOG2029 consensus Uncharacterized conserved protein [Function unknown]
Probab=87.87 E-value=1.7 Score=37.16 Aligned_cols=42 Identities=24% Similarity=0.294 Sum_probs=27.9
Q ss_pred CCCCceEEeeccchHHHHHHHHHHhccCCCCC-----CceeEEEeec
Q 039671 44 ADFGRVFIGGGSAGGNIAHTLAFQVGSIGLPR-----VKLVGVIMVH 85 (195)
Q Consensus 44 ~d~~~i~l~G~S~Gg~la~~~a~~~~~~~~~~-----~~~~~~i~~~ 85 (195)
.|-+.|+-+||||||.++=.+....-..+.|. ..-+|+|.++
T Consensus 523 G~~RPivwI~HSmGGLl~K~lLlda~~S~kP~ms~l~kNtrGiiFls 569 (697)
T KOG2029|consen 523 GDDRPIVWIGHSMGGLLAKKLLLDAYCSSKPDMSNLNKNTRGIIFLS 569 (697)
T ss_pred CCCCceEEEecccchHHHHHHHHHHhhcCCchhhhhhccCCceEEEe
Confidence 35778999999999999887776655333321 2345655444
No 227
>PF06259 Abhydrolase_8: Alpha/beta hydrolase; InterPro: IPR010427 This is a family of uncharacterised proteins found in Actinobacteria. Computational analysis suggests that they may belong to the alpha-beta hydrolase family of enzymes, as they are predicted to form the core secondary structures and catalytic machinery common to these proteins []. Genomic context suggests that they may function as lipases, controlling the concentration of their putative phospholipid substrates.
Probab=87.68 E-value=2.1 Score=30.95 Aligned_cols=23 Identities=22% Similarity=0.144 Sum_probs=19.1
Q ss_pred CCCceEEeeccchHHHHHHHHHH
Q 039671 45 DFGRVFIGGGSAGGNIAHTLAFQ 67 (195)
Q Consensus 45 d~~~i~l~G~S~Gg~la~~~a~~ 67 (195)
...++.++|||.|..++...+..
T Consensus 107 ~~~~~tv~GHSYGS~v~G~A~~~ 129 (177)
T PF06259_consen 107 PDAHLTVVGHSYGSTVVGLAAQQ 129 (177)
T ss_pred CCCCEEEEEecchhHHHHHHhhh
Confidence 45689999999999888777666
No 228
>PF05277 DUF726: Protein of unknown function (DUF726); InterPro: IPR007941 This family consists of several uncharacterised eukaryotic proteins.
Probab=86.94 E-value=2.8 Score=33.66 Aligned_cols=45 Identities=11% Similarity=0.019 Sum_probs=31.6
Q ss_pred CCCceEEeeccchHHHHHHHHHHhccCCCCCCceeEEEeeccccCC
Q 039671 45 DFGRVFIGGGSAGGNIAHTLAFQVGSIGLPRVKLVGVIMVHPFFGG 90 (195)
Q Consensus 45 d~~~i~l~G~S~Gg~la~~~a~~~~~~~~~~~~~~~~i~~~p~~~~ 90 (195)
..++|.|+|||+|+-+............. ...+..++++..+...
T Consensus 218 G~RpVtLvG~SLGarvI~~cL~~L~~~~~-~~lVe~VvL~Gapv~~ 262 (345)
T PF05277_consen 218 GERPVTLVGHSLGARVIYYCLLELAERKA-FGLVENVVLMGAPVPS 262 (345)
T ss_pred CCCceEEEeecccHHHHHHHHHHHHhccc-cCeEeeEEEecCCCCC
Confidence 34579999999999887776666654321 1247888888876655
No 229
>COG0596 MhpC Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=86.80 E-value=2.5 Score=30.70 Aligned_cols=57 Identities=21% Similarity=0.298 Sum_probs=34.4
Q ss_pred CEEEEEcCCccchhhHHHHHHHHHhcCCCc-cEEEEEecCCCccccccCCCchHHHHHHHHHHHHHH
Q 039671 128 RVLIFVAEKDFLKPVAMNYYEDLKKSGWKG-TVELVETHGEGHSFYFDNLKCEKAVELINKFVSFIT 193 (195)
Q Consensus 128 p~~i~~g~~D~l~~~~~~~~~~l~~~~~g~-~~~~~~~~g~~H~f~~~~~~~~~~~~~~~~~~~fl~ 193 (195)
|+++++|+.|.+.+... ...+.+. .. ..++.++++.+|......+ ....+.+.+|++
T Consensus 223 P~l~i~g~~d~~~~~~~--~~~~~~~--~~~~~~~~~~~~~gH~~~~~~p-----~~~~~~i~~~~~ 280 (282)
T COG0596 223 PTLIIHGEDDPVVPAEL--ARRLAAA--LPNDARLVVIPGAGHFPHLEAP-----EAFAAALLAFLE 280 (282)
T ss_pred CeEEEecCCCCcCCHHH--HHHHHhh--CCCCceEEEeCCCCCcchhhcH-----HHHHHHHHHHHh
Confidence 69999999995544332 2333333 12 3689999999995544332 245555555443
No 230
>KOG3967 consensus Uncharacterized conserved protein [Function unknown]
Probab=86.33 E-value=3.1 Score=31.06 Aligned_cols=58 Identities=16% Similarity=0.123 Sum_probs=43.6
Q ss_pred CCchHHHHHHHHHHHHHhccCCCCCCCCCCCCCCCceEEeeccchHHHHHHHHHHhccCCCCCCceeEEEeeccc
Q 039671 13 IPACYEDSWAALNWVASHAGGNGPEPWLNDHADFGRVFIGGGSAGGNIAHTLAFQVGSIGLPRVKLVGVIMVHPF 87 (195)
Q Consensus 13 ~p~~~~D~~~a~~~l~~~~~~~~~~~~~~~~~d~~~i~l~G~S~Gg~la~~~a~~~~~~~~~~~~~~~~i~~~p~ 87 (195)
....++-+.-.+..+... ..+..|+++.||.||.+.+.+..+-.+. .++.++.+....
T Consensus 169 irt~veh~~yvw~~~v~p-------------a~~~sv~vvahsyGG~~t~~l~~~f~~d----~~v~aialTDs~ 226 (297)
T KOG3967|consen 169 IRTPVEHAKYVWKNIVLP-------------AKAESVFVVAHSYGGSLTLDLVERFPDD----ESVFAIALTDSA 226 (297)
T ss_pred ccchHHHHHHHHHHHhcc-------------cCcceEEEEEeccCChhHHHHHHhcCCc----cceEEEEeeccc
Confidence 346677777777777665 5678999999999999999999887653 367777665544
No 231
>PLN02633 palmitoyl protein thioesterase family protein
Probab=85.71 E-value=1.8 Score=34.05 Aligned_cols=36 Identities=19% Similarity=0.008 Sum_probs=28.2
Q ss_pred ceEEeeccchHHHHHHHHHHhccCCCCCCceeEEEeeccc
Q 039671 48 RVFIGGGSAGGNIAHTLAFQVGSIGLPRVKLVGVIMVHPF 87 (195)
Q Consensus 48 ~i~l~G~S~Gg~la~~~a~~~~~~~~~~~~~~~~i~~~p~ 87 (195)
=+-++|+|-||.++-.+..+-++. ++++.+|.+++.
T Consensus 95 G~naIGfSQGGlflRa~ierc~~~----p~V~nlISlggp 130 (314)
T PLN02633 95 GYNIVGRSQGNLVARGLIEFCDGG----PPVYNYISLAGP 130 (314)
T ss_pred cEEEEEEccchHHHHHHHHHCCCC----CCcceEEEecCC
Confidence 388999999999999888887541 267888887654
No 232
>PLN02606 palmitoyl-protein thioesterase
Probab=84.69 E-value=2.1 Score=33.70 Aligned_cols=36 Identities=14% Similarity=0.017 Sum_probs=27.9
Q ss_pred ceEEeeccchHHHHHHHHHHhccCCCCCCceeEEEeeccc
Q 039671 48 RVFIGGGSAGGNIAHTLAFQVGSIGLPRVKLVGVIMVHPF 87 (195)
Q Consensus 48 ~i~l~G~S~Gg~la~~~a~~~~~~~~~~~~~~~~i~~~p~ 87 (195)
=+-++|+|-||.++-.++.+-++. +.++.+|.+++.
T Consensus 96 G~naIGfSQGglflRa~ierc~~~----p~V~nlISlggp 131 (306)
T PLN02606 96 GYNIVAESQGNLVARGLIEFCDNA----PPVINYVSLGGP 131 (306)
T ss_pred ceEEEEEcchhHHHHHHHHHCCCC----CCcceEEEecCC
Confidence 488999999999998888886531 267888877654
No 233
>PF06850 PHB_depo_C: PHB de-polymerase C-terminus; InterPro: IPR009656 This entry represents the C terminus of bacterial poly(3-hydroxybutyrate) (PHB) de-polymerase. This degrades PHB granules to oligomers and monomers of 3-hydroxy-butyric acid.
Probab=83.59 E-value=4.4 Score=29.75 Aligned_cols=66 Identities=18% Similarity=0.091 Sum_probs=40.6
Q ss_pred CEEEEEcCCccchhhHHHHHHHHHhcC-CCccEEEEEecCCCccccccCCCchHHHHHHHHHHHHHHhC
Q 039671 128 RVLIFVAEKDFLKPVAMNYYEDLKKSG-WKGTVELVETHGEGHSFYFDNLKCEKAVELINKFVSFITQL 195 (195)
Q Consensus 128 p~~i~~g~~D~l~~~~~~~~~~l~~~~-~g~~~~~~~~~g~~H~f~~~~~~~~~~~~~~~~~~~fl~~~ 195 (195)
+++-+-|+.|.+....+..+..---.| +......++.+|.+| +-++++. --..++.-.+.+||+++
T Consensus 136 aLlTVEGe~DDIsg~GQT~AA~~LC~glp~~~k~~~~~~g~GH-YGlF~G~-rwr~~I~P~i~~fi~~~ 202 (202)
T PF06850_consen 136 ALLTVEGERDDISGPGQTHAAHDLCTGLPADMKRHHLQPGVGH-YGLFNGS-RWREEIYPRIREFIRQH 202 (202)
T ss_pred eeEEeecCcccCCcchHHHHHHHHhcCCCHHHhhhcccCCCCe-eecccch-hhhhhhhHHHHHHHHhC
Confidence 688899999998855444433221120 011346678899999 6666542 22345666778888764
No 234
>COG4553 DepA Poly-beta-hydroxyalkanoate depolymerase [Lipid metabolism]
Probab=83.29 E-value=21 Score=28.25 Aligned_cols=71 Identities=11% Similarity=0.077 Sum_probs=40.3
Q ss_pred hhhcccCCCCEEEEEcCCccchh--hHHHHHHHHHhcCCCccEEEEEecCCCccccccCCCchHHHHHHHHHHHHHHhC
Q 039671 119 EDLARLGCERVLIFVAEKDFLKP--VAMNYYEDLKKSGWKGTVELVETHGEGHSFYFDNLKCEKAVELINKFVSFITQL 195 (195)
Q Consensus 119 ~~~~~~~~pp~~i~~g~~D~l~~--~~~~~~~~l~~~~~g~~~~~~~~~g~~H~f~~~~~~~~~~~~~~~~~~~fl~~~ 195 (195)
+.+++. -++-+-|++|.+.- ++..-.+...+. +......+..|+.+| +-.+++. .-.+.+..++.+|++++
T Consensus 335 ~~I~~~---aL~tvEGEnDDIsgvGQTkAA~~LC~nI-pe~mk~hy~qp~vGH-YGVFnGs-rfr~eIvPri~dFI~~~ 407 (415)
T COG4553 335 TAITNV---ALFTVEGENDDISGVGQTKAAHDLCSNI-PEDMKQHYMQPDVGH-YGVFNGS-RFREEIVPRIRDFIRRY 407 (415)
T ss_pred hheece---eEEEeecccccccccchhHHHHHHHhcC-hHHHHHHhcCCCCCc-cceeccc-hHHHHHHHHHHHHHHHh
Confidence 344444 48888999997653 322221222221 011235678899999 5444432 22356677888898764
No 235
>PF10081 Abhydrolase_9: Alpha/beta-hydrolase family; InterPro: IPR012037 There are currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function.
Probab=82.15 E-value=3.2 Score=32.26 Aligned_cols=79 Identities=18% Similarity=0.193 Sum_probs=44.0
Q ss_pred CCCcCCCCCCC-CC---C-chHHHHHHHHHHHHHhccCCCCCCCCCCCCCCCceEEeeccchHHHHHHHHHHhccCCCCC
Q 039671 1 VSVEYGLFPDR-PI---P-ACYEDSWAALNWVASHAGGNGPEPWLNDHADFGRVFIGGGSAGGNIAHTLAFQVGSIGLPR 75 (195)
Q Consensus 1 ~~~~Yrlap~~-~~---p-~~~~D~~~a~~~l~~~~~~~~~~~~~~~~~d~~~i~l~G~S~Gg~la~~~a~~~~~~~~~~ 75 (195)
+++.|...|.- .| + ...+-..+.++-+...-..+++ -+.=|++|.|.|.|++-+........+..
T Consensus 65 va~QYSylPSw~sfl~dr~~a~~a~~aL~~aV~~~~~~lP~-------~~RPkL~l~GeSLGa~g~~~af~~~~~~~--- 134 (289)
T PF10081_consen 65 VAMQYSYLPSWLSFLVDRDAAREAARALFEAVYARWSTLPE-------DRRPKLYLYGESLGAYGGEAAFDGLDDLR--- 134 (289)
T ss_pred EEeccccccchHHHhcccchHHHHHHHHHHHHHHHHHhCCc-------ccCCeEEEeccCccccchhhhhccHHHhh---
Confidence 35677777763 33 2 2333344444445444444431 23448999999999976654443332221
Q ss_pred CceeEEEeeccccC
Q 039671 76 VKLVGVIMVHPFFG 89 (195)
Q Consensus 76 ~~~~~~i~~~p~~~ 89 (195)
.++.|++...|...
T Consensus 135 ~~vdGalw~GpP~~ 148 (289)
T PF10081_consen 135 DRVDGALWVGPPFF 148 (289)
T ss_pred hhcceEEEeCCCCC
Confidence 25777777666544
No 236
>KOG2182 consensus Hydrolytic enzymes of the alpha/beta hydrolase fold [Posttranslational modification, protein turnover, chaperones; General function prediction only]
Probab=81.31 E-value=4.7 Score=33.83 Aligned_cols=58 Identities=14% Similarity=0.063 Sum_probs=43.6
Q ss_pred chHHHHHHHHHHHHHhccCCCCCCCCCCCCCCCceEEeeccchHHHHHHHHHHhccCCCCCCceeEEEeecccc
Q 039671 15 ACYEDSWAALNWVASHAGGNGPEPWLNDHADFGRVFIGGGSAGGNIAHTLAFQVGSIGLPRVKLVGVIMVHPFF 88 (195)
Q Consensus 15 ~~~~D~~~a~~~l~~~~~~~~~~~~~~~~~d~~~i~l~G~S~Gg~la~~~a~~~~~~~~~~~~~~~~i~~~p~~ 88 (195)
.++.|+..+++.+...... .+..+.+..|.|.-|.|++.+=.+.++ .+.|.+..|.++
T Consensus 150 QALaDla~fI~~~n~k~n~----------~~~~~WitFGgSYsGsLsAW~R~~yPe------l~~GsvASSapv 207 (514)
T KOG2182|consen 150 QALADLAEFIKAMNAKFNF----------SDDSKWITFGGSYSGSLSAWFREKYPE------LTVGSVASSAPV 207 (514)
T ss_pred HHHHHHHHHHHHHHhhcCC----------CCCCCeEEECCCchhHHHHHHHHhCch------hheeecccccce
Confidence 5789999998888776431 345699999999999999887777764 566666655544
No 237
>PF02089 Palm_thioest: Palmitoyl protein thioesterase; InterPro: IPR002472 Neuronal ceroid lipofuscinoses (NCL) represent a group of encephalopathies that occur in 1 in 12,500 children. Mutations in the palmitoyl protein thioesterase gene causing infantile neuronal ceroid lipofuscinosis []. The most common mutation results in intracellular accumulation of the polypeptide and undetectable enzyme activity in the brain. Direct sequencing of cDNAs derived from brain RNA of INCL patients has shown a mis-sense transversion of A to T at nucleotide position 364, which results in substitution of Trp for Arg at position 122 in the protein - Arg 122 is immediately adjacent to a lipase consensus sequence that contains the putative active site Ser of PPT. The occurrence of this and two other independent mutations in the PPT gene strongly suggests that defects in this gene cause INCL.; GO: 0008474 palmitoyl-(protein) hydrolase activity, 0006464 protein modification process; PDB: 3GRO_B 1PJA_A 1EXW_A 1EH5_A 1EI9_A.
Probab=81.26 E-value=4 Score=31.73 Aligned_cols=36 Identities=14% Similarity=0.024 Sum_probs=26.6
Q ss_pred ceEEeeccchHHHHHHHHHHhccCCCCCCceeEEEeecccc
Q 039671 48 RVFIGGGSAGGNIAHTLAFQVGSIGLPRVKLVGVIMVHPFF 88 (195)
Q Consensus 48 ~i~l~G~S~Gg~la~~~a~~~~~~~~~~~~~~~~i~~~p~~ 88 (195)
=+-++|+|-||.++-.++.+-+. +.++.+|.+++.-
T Consensus 81 G~~~IGfSQGgl~lRa~vq~c~~-----~~V~nlISlggph 116 (279)
T PF02089_consen 81 GFNAIGFSQGGLFLRAYVQRCND-----PPVHNLISLGGPH 116 (279)
T ss_dssp -EEEEEETCHHHHHHHHHHH-TS-----S-EEEEEEES--T
T ss_pred ceeeeeeccccHHHHHHHHHCCC-----CCceeEEEecCcc
Confidence 48899999999999998888753 3789999987653
No 238
>PF06500 DUF1100: Alpha/beta hydrolase of unknown function (DUF1100); InterPro: IPR010520 Proteins in this entry display esterase activity toward pNP-butyrate []. This entry also includes 2,6-dihydropseudooxynicotine hydrolase which has a role in nicotine catabolism by cleaving a C-C bond in 2,6-dihydroxypseudooxyicotine [, ].; PDB: 3OUR_A 3MVE_B 2JBW_C.
Probab=81.15 E-value=2 Score=35.23 Aligned_cols=63 Identities=14% Similarity=0.108 Sum_probs=39.6
Q ss_pred CEEEEEcCCccchhh-HHHHHHHHHhcCCCccEEEEEecCCCccccccCCCchHHHHHHHHHHHHHHh
Q 039671 128 RVLIFVAEKDFLKPV-AMNYYEDLKKSGWKGTVELVETHGEGHSFYFDNLKCEKAVELINKFVSFITQ 194 (195)
Q Consensus 128 p~~i~~g~~D~l~~~-~~~~~~~l~~~~~g~~~~~~~~~g~~H~f~~~~~~~~~~~~~~~~~~~fl~~ 194 (195)
|++|+.|+-|.+.++ ...|.+.+... |..+-....||.++... . +..+......+.+++||..
T Consensus 191 P~VIv~gGlDs~qeD~~~l~~~~l~~r--GiA~LtvDmPG~G~s~~-~-~l~~D~~~l~~aVLd~L~~ 254 (411)
T PF06500_consen 191 PTVIVCGGLDSLQEDLYRLFRDYLAPR--GIAMLTVDMPGQGESPK-W-PLTQDSSRLHQAVLDYLAS 254 (411)
T ss_dssp EEEEEE--TTS-GGGGHHHHHCCCHHC--T-EEEEE--TTSGGGTT-T--S-S-CCHHHHHHHHHHHH
T ss_pred CEEEEeCCcchhHHHHHHHHHHHHHhC--CCEEEEEccCCCccccc-C-CCCcCHHHHHHHHHHHHhc
Confidence 799999999999966 45566678888 68888888999888421 1 1223445677788888864
No 239
>PF07519 Tannase: Tannase and feruloyl esterase; InterPro: IPR011118 This family includes fungal tannase [] and feruloyl esterase [, ]. It also includes several bacterial homologues of unknown function.
Probab=78.53 E-value=5 Score=33.80 Aligned_cols=60 Identities=15% Similarity=0.130 Sum_probs=46.7
Q ss_pred HHHHHHHHHHHHHhccCCCCCCCCCCCCCCCceEEeeccchHHHHHHHHHHhccCCCCCCceeEEEeeccccCCCC
Q 039671 17 YEDSWAALNWVASHAGGNGPEPWLNDHADFGRVFIGGGSAGGNIAHTLAFQVGSIGLPRVKLVGVIMVHPFFGGTS 92 (195)
Q Consensus 17 ~~D~~~a~~~l~~~~~~~~~~~~~~~~~d~~~i~l~G~S~Gg~la~~~a~~~~~~~~~~~~~~~~i~~~p~~~~~~ 92 (195)
+.+...+-+.|.+... + -.+++-+-.|+|-||--++..|.+.++ .+.|++.-+|..+...
T Consensus 95 ~h~~~~~aK~l~~~~Y--g--------~~p~~sY~~GcS~GGRqgl~~AQryP~------dfDGIlAgaPA~~~~~ 154 (474)
T PF07519_consen 95 LHETTVVAKALIEAFY--G--------KAPKYSYFSGCSTGGRQGLMAAQRYPE------DFDGILAGAPAINWTH 154 (474)
T ss_pred HHHHHHHHHHHHHHHh--C--------CCCCceEEEEeCCCcchHHHHHHhChh------hcCeEEeCCchHHHHH
Confidence 4444455555655543 3 567899999999999999999999976 8999999999987643
No 240
>KOG2541 consensus Palmitoyl protein thioesterase [Lipid transport and metabolism; Posttranslational modification, protein turnover, chaperones]
Probab=78.15 E-value=21 Score=27.76 Aligned_cols=37 Identities=22% Similarity=0.074 Sum_probs=27.0
Q ss_pred CCceEEeeccchHHHHHHHHHHhccCCCCCCceeEEEeeccc
Q 039671 46 FGRVFIGGGSAGGNIAHTLAFQVGSIGLPRVKLVGVIMVHPF 87 (195)
Q Consensus 46 ~~~i~l~G~S~Gg~la~~~a~~~~~~~~~~~~~~~~i~~~p~ 87 (195)
++=+.++|.|-||.++-.++..-.. +.++..|+.++.
T Consensus 91 sqGynivg~SQGglv~Raliq~cd~-----ppV~n~ISL~gP 127 (296)
T KOG2541|consen 91 SQGYNIVGYSQGGLVARALIQFCDN-----PPVKNFISLGGP 127 (296)
T ss_pred cCceEEEEEccccHHHHHHHHhCCC-----CCcceeEeccCC
Confidence 3458899999999888887777543 267777776654
No 241
>COG4287 PqaA PhoPQ-activated pathogenicity-related protein [General function prediction only]
Probab=77.59 E-value=13 Score=30.34 Aligned_cols=40 Identities=23% Similarity=0.345 Sum_probs=26.2
Q ss_pred CCCCEEEEEcCCccch-hhHHHHHHHHHhcCCCccEEEEEecCCCc
Q 039671 125 GCERVLIFVAEKDFLK-PVAMNYYEDLKKSGWKGTVELVETHGEGH 169 (195)
Q Consensus 125 ~~pp~~i~~g~~D~l~-~~~~~~~~~l~~~~~g~~~~~~~~~g~~H 169 (195)
..|+.++-.+++|.++ +.+..+++.|.. ...+...|+..|
T Consensus 329 alpKyivnaSgDdff~pDsa~lYyd~LPG-----~kaLrmvPN~~H 369 (507)
T COG4287 329 ALPKYIVNASGDDFFVPDSANLYYDDLPG-----EKALRMVPNDPH 369 (507)
T ss_pred cccceeecccCCcccCCCccceeeccCCC-----ceeeeeCCCCcc
Confidence 4454444444555666 557777777743 456888999999
No 242
>cd07224 Pat_like Patatin-like phospholipase. Patatin-like phospholipase. This family consists of various patatin glycoproteins from plants. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of lipid acyl hydrolase, catalysing the cleavage of fatty acids from membrane lipids. Members of this family have been found also in vertebrates.
Probab=75.70 E-value=3.9 Score=30.87 Aligned_cols=34 Identities=21% Similarity=0.112 Sum_probs=25.0
Q ss_pred HHHHHHHhccCCCCCCCCCCCCCCCceEEeeccchHHHHHHHHHHh
Q 039671 23 ALNWVASHAGGNGPEPWLNDHADFGRVFIGGGSAGGNIAHTLAFQV 68 (195)
Q Consensus 23 a~~~l~~~~~~~~~~~~~~~~~d~~~i~l~G~S~Gg~la~~~a~~~ 68 (195)
++++|.++. +.++.-.+.|-|+|+..+..++...
T Consensus 17 Vl~~L~e~g------------i~~~~~~i~G~SAGAl~aa~~asg~ 50 (233)
T cd07224 17 VLSLLIEAG------------VINETTPLAGASAGSLAAACSASGL 50 (233)
T ss_pred HHHHHHHcC------------CCCCCCEEEEEcHHHHHHHHHHcCC
Confidence 566676652 4445568999999999998887664
No 243
>PF12122 DUF3582: Protein of unknown function (DUF3582); InterPro: IPR022732 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This entry represents the N-terminal domain of membrane-bound serine endopeptidases belonging to MEROPS peptidase family S54 (rhomboid-1, clan ST). This domain contains a conserved ASW sequence motif and a single completely conserved residue F that may be functionally important. The tertiary structure of the GlpG protein from Escherichia coli has been determined []. The GlpG protein has six transmembrane domains (other members of the family are predicted to have seven), with the N- and C-terminal ends anchored in the cytoplasm. One transmembrane domain is shorter than the rest, creating an internal, aqueous cavity just below the membrane surface and it is here were proteolysis occurs. There is also a membrane-embedded loop between the first and second transmembrane domains which is postulated to act as a gate controlling substrate access to the active site. No other family of serine peptidases is known to have active site residues within transmembrane domains (although transmembrane active sites are known for aspartic peptidase and metallopeptidases), and the GlpG protein has the type structure for clan ST.; GO: 0004252 serine-type endopeptidase activity, 0016021 integral to membrane; PDB: 3UBB_A 3B45_A 3B44_A 2NRF_A 3TXT_A 2O7L_A 2XTU_A 2IRV_A 2XOW_A 2XTV_A ....
Probab=67.83 E-value=21 Score=23.16 Aligned_cols=48 Identities=13% Similarity=0.127 Sum_probs=27.6
Q ss_pred hHHHHHHHHHhcCCCccEEEEEecCCCccccccCCCchHHHHHHHHHHHHHH
Q 039671 142 VAMNYYEDLKKSGWKGTVELVETHGEGHSFYFDNLKCEKAVELINKFVSFIT 193 (195)
Q Consensus 142 ~~~~~~~~l~~~~~g~~~~~~~~~g~~H~f~~~~~~~~~~~~~~~~~~~fl~ 193 (195)
.+..|++.|+.. |+++++....+ ++ |.++=.+.+...++..++..|++
T Consensus 12 ~AqaF~DYl~sq--gI~~~i~~~~~-~~-~~lwl~de~~~~~a~~el~~Fl~ 59 (101)
T PF12122_consen 12 AAQAFIDYLASQ--GIELQIEPEGQ-GQ-FALWLHDEEHLEQAEQELEEFLQ 59 (101)
T ss_dssp HHHHHHHHHHHT--T--EEEE-SSS-E---EEEES-GGGHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHC--CCeEEEEECCC-Cc-eEEEEeCHHHHHHHHHHHHHHHH
Confidence 488999999999 77777776444 32 22221222455666667777775
No 244
>cd07218 Pat_iPLA2 Calcium-independent phospholipase A2; Classified as Group IVA-1 PLA2. Calcium-independent phospholipase A2; otherwise known as Group IVA-1 PLA2. It contains the lipase consensus sequence (Gly-X-Ser-X-Gly);mutagenesis experiments confirm the role of this serine as a nucleophile. Some members of this group show triacylglycerol lipase activity (EC 3:1:1:3). Members include iPLA-1, iPLA-2, and iPLA-3 from Aedes aegypti and show acylglycerol transacylase/lipase activity. Also includes putative iPLA2-eta from Pediculus humanus corporis which shows patatin-like phospholipase activity.
Probab=67.52 E-value=8.1 Score=29.44 Aligned_cols=18 Identities=39% Similarity=0.458 Sum_probs=15.6
Q ss_pred EeeccchHHHHHHHHHHh
Q 039671 51 IGGGSAGGNIAHTLAFQV 68 (195)
Q Consensus 51 l~G~S~Gg~la~~~a~~~ 68 (195)
+.|-|+|+..|..++...
T Consensus 34 i~GtSAGAl~aa~~a~g~ 51 (245)
T cd07218 34 ISGASAGALAACCLLCDL 51 (245)
T ss_pred EEEEcHHHHHHHHHHhCC
Confidence 999999999999887653
No 245
>cd07205 Pat_PNPLA6_PNPLA7_NTE1_like Patatin-like phospholipase domain containing protein 6, protein 7, and fungal NTE1. Patatin-like phospholipase domain containing protein 6 (PNPLA6) and protein 7 (PNPLA7) are included in this family. PNPLA6 is commonly known as Neuropathy Target Esterase (NTE). NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. PNPLA7 is an insulin-regulated phospholipase that is homologus to Neuropathy Target Esterase (NTE or PNPLA6) and is also known as NTE-related esterase (NRE). Human NRE is predominantly expressed in prostate, white adipose, and panc
Probab=64.66 E-value=9.5 Score=27.11 Aligned_cols=19 Identities=26% Similarity=0.324 Sum_probs=16.3
Q ss_pred EEeeccchHHHHHHHHHHh
Q 039671 50 FIGGGSAGGNIAHTLAFQV 68 (195)
Q Consensus 50 ~l~G~S~Gg~la~~~a~~~ 68 (195)
.++|-|+|+.+|..++...
T Consensus 31 ~i~GtSaGal~a~~~a~g~ 49 (175)
T cd07205 31 IVSGTSAGAIVGALYAAGY 49 (175)
T ss_pred EEEEECHHHHHHHHHHcCC
Confidence 6999999999999888553
No 246
>PF12146 Hydrolase_4: Putative lysophospholipase; InterPro: IPR022742 This domain is found in bacteria and eukaryotes and is approximately 110 amino acids in length. Many members are annotated as being lysophospholipases, and others as alpha-beta hydrolase fold-containing proteins.
Probab=62.10 E-value=34 Score=20.91 Aligned_cols=61 Identities=13% Similarity=0.063 Sum_probs=39.0
Q ss_pred CEEEEEcCCccchhhHHHHHHHHHhcCCCccEEEEEecCCCccccccC-CCchHHHHHHHHHHHHHH
Q 039671 128 RVLIFVAEKDFLKPVAMNYYEDLKKSGWKGTVELVETHGEGHSFYFDN-LKCEKAVELINKFVSFIT 193 (195)
Q Consensus 128 p~~i~~g~~D~l~~~~~~~~~~l~~~~~g~~~~~~~~~g~~H~f~~~~-~~~~~~~~~~~~~~~fl~ 193 (195)
=++|+||-.|..-. =..+++.|.+. |. .+..+.--+|+..... ...+..++.++++..|++
T Consensus 18 ~v~i~HG~~eh~~r-y~~~a~~L~~~--G~--~V~~~D~rGhG~S~g~rg~~~~~~~~v~D~~~~~~ 79 (79)
T PF12146_consen 18 VVVIVHGFGEHSGR-YAHLAEFLAEQ--GY--AVFAYDHRGHGRSEGKRGHIDSFDDYVDDLHQFIQ 79 (79)
T ss_pred EEEEeCCcHHHHHH-HHHHHHHHHhC--CC--EEEEECCCcCCCCCCcccccCCHHHHHHHHHHHhC
Confidence 38888998775432 34466778777 34 4455565667765432 244566788888888763
No 247
>KOG2521 consensus Uncharacterized conserved protein [Function unknown]
Probab=59.65 E-value=44 Score=27.03 Aligned_cols=61 Identities=13% Similarity=0.132 Sum_probs=42.5
Q ss_pred CEEEEEcCCccch--hhHHHHHHHHHhcCCCccEEEEEecCCCccccccCCCchHHHHHHHHHHHHHHh
Q 039671 128 RVLIFVAEKDFLK--PVAMNYYEDLKKSGWKGTVELVETHGEGHSFYFDNLKCEKAVELINKFVSFITQ 194 (195)
Q Consensus 128 p~~i~~g~~D~l~--~~~~~~~~~l~~~~~g~~~~~~~~~g~~H~f~~~~~~~~~~~~~~~~~~~fl~~ 194 (195)
+.+.+++..|.++ ++.++|++..++. |..++..-+.+..|.-+.-. . + ..-.+...+|++.
T Consensus 227 ~~ly~~s~~d~v~~~~~ie~f~~~~~~~--g~~v~s~~~~ds~H~~h~r~-~-p--~~y~~~~~~Fl~~ 289 (350)
T KOG2521|consen 227 NQLYLYSDNDDVLPADEIEKFIALRREK--GVNVKSVKFKDSEHVAHFRS-F-P--KTYLKKCSEFLRS 289 (350)
T ss_pred cceeecCCccccccHHHHHHHHHHHHhc--CceEEEeeccCccceeeecc-C-c--HHHHHHHHHHHHh
Confidence 4667778888776 5689999999999 89999999999999553322 2 1 2344445555553
No 248
>cd07210 Pat_hypo_W_succinogenes_WS1459_like Hypothetical patatin similar to WS1459 of Wolinella succinogenes. Patatin-like phospholipase. This family predominantly consists of bacterial patatin glycoproteins. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have also been found in vertebrates.
Probab=59.30 E-value=14 Score=27.69 Aligned_cols=18 Identities=33% Similarity=0.331 Sum_probs=15.8
Q ss_pred EEeeccchHHHHHHHHHH
Q 039671 50 FIGGGSAGGNIAHTLAFQ 67 (195)
Q Consensus 50 ~l~G~S~Gg~la~~~a~~ 67 (195)
.++|-|+|+.+|+.++..
T Consensus 31 ~i~GtSaGAi~aa~~a~g 48 (221)
T cd07210 31 AISGTSAGALVGGLFASG 48 (221)
T ss_pred EEEEeCHHHHHHHHHHcC
Confidence 599999999999988864
No 249
>cd07230 Pat_TGL4-5_like Triacylglycerol lipase 4 and 5. TGL4 and TGL5 are triacylglycerol lipases that are involved in triacylglycerol mobilization and degradation; they are found in lipid particles. Tgl4 is a functional ortholog of mammalian adipose TG lipase (ATGL) and is phosphorylated and activated by cyclin-dependent kinase 1 (Cdk1/Cdc28). TGL4 is 30% homologus to TGL3, whereas TGL5 is 26% homologus to TGL3. This family includes TGL4 (STC1) and TGL5 (STC2) from Saccharomyces cerevisiae.
Probab=59.06 E-value=12 Score=30.96 Aligned_cols=19 Identities=37% Similarity=0.506 Sum_probs=16.6
Q ss_pred EEeeccchHHHHHHHHHHh
Q 039671 50 FIGGGSAGGNIAHTLAFQV 68 (195)
Q Consensus 50 ~l~G~S~Gg~la~~~a~~~ 68 (195)
+|+|-|+|+.+|+.++...
T Consensus 104 vIsGTSaGAivAal~as~~ 122 (421)
T cd07230 104 IISGSSAGSIVAAILCTHT 122 (421)
T ss_pred EEEEECHHHHHHHHHHcCC
Confidence 7999999999999888754
No 250
>cd07198 Patatin Patatin-like phospholipase. Patatin is a storage protein of the potato tuber that shows Phospholipase A2 activity (PLA2; EC 3.1.1.4). Patatin catalyzes the nonspecific hydrolysis of phospholipids, glycolipids, sulfolipids, and mono- and diacylglycerols, thereby showing lipid acyl hydrolase activity. The active site includes an oxyanion hole with a conserved GGxR motif; it is found in almost all the members of this family. The catalytic dyad is formed by a serine and an aspartate. Patatin belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue and Nu = nucleophile). Members of this family have been found also in vertebrates. This family includes PNPLA (1-9), TGL (3-5), ExoU-like, and SDP1-like subfamilies. There are some additional hypothetical proteins included in this family.
Probab=58.83 E-value=15 Score=26.10 Aligned_cols=21 Identities=38% Similarity=0.297 Sum_probs=17.4
Q ss_pred ceEEeeccchHHHHHHHHHHh
Q 039671 48 RVFIGGGSAGGNIAHTLAFQV 68 (195)
Q Consensus 48 ~i~l~G~S~Gg~la~~~a~~~ 68 (195)
.-.+.|-|+|+..|+.++...
T Consensus 27 ~d~v~GtSaGAi~aa~~a~g~ 47 (172)
T cd07198 27 IDIIAGTSAGAIVAALLASGR 47 (172)
T ss_pred CCEEEEECHHHHHHHHHHcCC
Confidence 456999999999998888764
No 251
>cd07207 Pat_ExoU_VipD_like ExoU and VipD-like proteins; homologus to patatin, cPLA2, and iPLA2. ExoU, a 74-kDa enzyme, is a potent virulence factor of Pseudomonas aeruginosa. One of the pathogenic mechanisms of P. aeruginosa is to induce cytotoxicity by the injection of effector proteins (e.g. ExoU) using the type III secretion (T3S) system. ExoU is homologus to patatin and also has the conserved catalytic residues of mammalian calcium-independent (iPLA2) and cytosolic (cPLA2) PLA2. In vitro, ExoU cytotoxity is blocked by the inhibitor of cytosolic and Ca2-independent phospholipase A2 (cPLA2 and iPLA2) enzymes, suggesting that phospholipase A2 inhibitors may represent a novel mode of treatment for acute P. aeruginosa infections. ExoU requires eukaryotic superoxide dismutase as a cofactor and cleaves phosphatidylcholine and phosphatidylethanolamine in vitro. VipD, a 69-kDa cytosolic protein, belongs to the members of Legionella pneumophila family and is homologus to ExoU from Pseudomona
Probab=58.47 E-value=14 Score=26.66 Aligned_cols=20 Identities=35% Similarity=0.320 Sum_probs=16.9
Q ss_pred eEEeeccchHHHHHHHHHHh
Q 039671 49 VFIGGGSAGGNIAHTLAFQV 68 (195)
Q Consensus 49 i~l~G~S~Gg~la~~~a~~~ 68 (195)
=.++|-|+||.+|+.++...
T Consensus 29 d~i~GtSaGai~aa~~a~g~ 48 (194)
T cd07207 29 KRVAGTSAGAITAALLALGY 48 (194)
T ss_pred ceEEEECHHHHHHHHHHcCC
Confidence 57999999999999888653
No 252
>KOG1283 consensus Serine carboxypeptidases [Posttranslational modification, protein turnover, chaperones]
Probab=58.05 E-value=22 Score=28.44 Aligned_cols=65 Identities=14% Similarity=0.209 Sum_probs=42.9
Q ss_pred HHHHHHHHhccCCCCCCCCCCCCCCCceEEeeccchHHHHHHHHHHhcc---CCCCCCceeEEEeeccccCCCCc
Q 039671 22 AALNWVASHAGGNGPEPWLNDHADFGRVFIGGGSAGGNIAHTLAFQVGS---IGLPRVKLVGVIMVHPFFGGTSP 93 (195)
Q Consensus 22 ~a~~~l~~~~~~~~~~~~~~~~~d~~~i~l~G~S~Gg~la~~~a~~~~~---~~~~~~~~~~~i~~~p~~~~~~~ 93 (195)
+.+.+|++-..++++ .....++|+-.|.||-+|..++...-+ .+.-...+.++++-.+|+...+.
T Consensus 104 Dl~~llk~f~~~h~e-------~~t~P~~If~ESYGGKma~k~al~l~~aIk~G~i~~nf~~VaLGDSWISP~D~ 171 (414)
T KOG1283|consen 104 DLVELLKGFFTNHPE-------FKTVPLYIFCESYGGKMAAKFALELDDAIKRGEIKLNFIGVALGDSWISPEDF 171 (414)
T ss_pred HHHHHHHHHHhcCcc-------ccccceEEEEhhcccchhhhhhhhHHHHHhcCceeecceeEEccCcccChhHh
Confidence 444555554444432 567889999999999999988876532 22111357788888888776543
No 253
>PRK10279 hypothetical protein; Provisional
Probab=57.18 E-value=14 Score=29.16 Aligned_cols=19 Identities=21% Similarity=0.310 Sum_probs=15.8
Q ss_pred eEEeeccchHHHHHHHHHH
Q 039671 49 VFIGGGSAGGNIAHTLAFQ 67 (195)
Q Consensus 49 i~l~G~S~Gg~la~~~a~~ 67 (195)
-.|+|.|+|+.++..++..
T Consensus 35 d~i~GtS~GAlvga~yA~g 53 (300)
T PRK10279 35 DIVAGCSIGSLVGAAYACD 53 (300)
T ss_pred CEEEEEcHHHHHHHHHHcC
Confidence 5699999999999877743
No 254
>PF04301 DUF452: Protein of unknown function (DUF452); InterPro: IPR007398 This is a family of uncharacterised proteins.
Probab=55.49 E-value=18 Score=27.05 Aligned_cols=36 Identities=11% Similarity=0.071 Sum_probs=24.0
Q ss_pred CCceEEeeccchHHHHHHHHHHhccCCCCCCceeEEEeeccccC
Q 039671 46 FGRVFIGGGSAGGNIAHTLAFQVGSIGLPRVKLVGVIMVHPFFG 89 (195)
Q Consensus 46 ~~~i~l~G~S~Gg~la~~~a~~~~~~~~~~~~~~~~i~~~p~~~ 89 (195)
-++|.|+++|||-..|..+.... +++..+.+.|..-
T Consensus 56 y~~i~lvAWSmGVw~A~~~l~~~--------~~~~aiAINGT~~ 91 (213)
T PF04301_consen 56 YREIYLVAWSMGVWAANRVLQGI--------PFKRAIAINGTPY 91 (213)
T ss_pred CceEEEEEEeHHHHHHHHHhccC--------CcceeEEEECCCC
Confidence 46899999999998776554322 3555566655443
No 255
>cd07204 Pat_PNPLA_like Patatin-like phospholipase domain containing protein family. Members of this family share a patain domain, initially discovered in potato tubers. PNPLA protein members show non-specific hydrolase activity with a variety of substrates such as triacylglycerol, phospholipids, and retinylesters. It contains the lipase consensus sequence (Gly-X-Ser-X-Gly). Nomenclature of PNPLA family could be misleading as some of the mammalian members of this family show hydrolase, but no phospholipase activity.
Probab=54.40 E-value=18 Score=27.52 Aligned_cols=20 Identities=35% Similarity=0.371 Sum_probs=16.7
Q ss_pred eEEeeccchHHHHHHHHHHh
Q 039671 49 VFIGGGSAGGNIAHTLAFQV 68 (195)
Q Consensus 49 i~l~G~S~Gg~la~~~a~~~ 68 (195)
-.++|-|+|+..|+.++...
T Consensus 33 ~~i~GtSAGAl~aa~~a~g~ 52 (243)
T cd07204 33 RRIAGASAGAIVAAVVLCGV 52 (243)
T ss_pred CEEEEEcHHHHHHHHHHhCC
Confidence 37999999999999877654
No 256
>PF04260 DUF436: Protein of unknown function (DUF436) ; InterPro: IPR006340 Members of this family are uncharacterised proteins of about 180 amino acids from the Bacillus/Clostridium group of Gram-positive bacteria, found in no more than one copy per genome. ; PDB: 1V8D_C.
Probab=54.40 E-value=17 Score=25.96 Aligned_cols=28 Identities=25% Similarity=0.328 Sum_probs=17.3
Q ss_pred HHHHHHHHHHHHhccCCCCCCCCCCCCCCCceEEeeccc
Q 039671 18 EDSWAALNWVASHAGGNGPEPWLNDHADFGRVFIGGGSA 56 (195)
Q Consensus 18 ~D~~~a~~~l~~~~~~~~~~~~~~~~~d~~~i~l~G~S~ 56 (195)
+|+..+++.+.+... ..+.+++++|+|-
T Consensus 1 ~q~~~~~~El~~~a~-----------l~~g~i~VvGcST 28 (172)
T PF04260_consen 1 QQLRQALEELLEQAN-----------LKPGQIFVVGCST 28 (172)
T ss_dssp --HHHHHHHHHHHS--------------TT-EEEEEE-H
T ss_pred ChHHHHHHHHHHhcC-----------CCCCCEEEEeeeH
Confidence 467778888877754 6788999999994
No 257
>cd07212 Pat_PNPLA9 Patatin-like phospholipase domain containing protein 9. PNPLA9 is a Ca-independent phospholipase that catalyzes the hydrolysis of glycerophospholipids at the sn-2 position. PNPLA9 is also known as PLA2G6 (phospholipase A2 group VI) or iPLA2beta. PLA2G6 is stimulated by ATP and inhibited by bromoenol lactone (BEL). In humans, PNPLA9 in expressed ubiquitously and is involved in signal transduction, cell proliferation, and apoptotic cell death. Mutations in human PLA2G6 leads to infantile neuroaxonal dystrophy (INAD) and idiopathic neurodegeneration with brain iron accumulation (NBIA). This family includes PLA2G6 from Homo sapiens and Rattus norvegicus.
Probab=53.90 E-value=10 Score=30.01 Aligned_cols=18 Identities=39% Similarity=0.600 Sum_probs=15.9
Q ss_pred EEeeccchHHHHHHHHHH
Q 039671 50 FIGGGSAGGNIAHTLAFQ 67 (195)
Q Consensus 50 ~l~G~S~Gg~la~~~a~~ 67 (195)
.|+|.|+||.+|+.++..
T Consensus 35 ~i~GTStGgiIA~~la~g 52 (312)
T cd07212 35 WIAGTSTGGILALALLHG 52 (312)
T ss_pred EEEeeChHHHHHHHHHcC
Confidence 699999999999988863
No 258
>cd00883 beta_CA_cladeA Carbonic anhydrases (CA) are zinc-containing enzymes that catalyze the reversible hydration of carbon dioxide in a two-step mechanism in which the nucleophilic attack of a zinc-bound hydroxide ion on carbon dioxide is followed by the regeneration of an active site by ionization of the zinc-bound water molecule and removal of a proton from the active site. CAs are ubiquitous enzymes involved in fundamental processes like photosynthesis, respiration, pH homeostasis and ion transport. There are three evolutionarily distinct families of CAs (the alpha-, beta-, and gamma-CAs) which show no significant sequence identity or structural similarity. Within the beta-CA family there are four evolutionarily distinct clades (A through D). The beta-CAs are multimeric enzymes (forming dimers,tetramers,hexamers and octamers) which are present in higher plants, algae, fungi, archaea and prokaryotes.
Probab=53.31 E-value=21 Score=25.81 Aligned_cols=33 Identities=9% Similarity=0.233 Sum_probs=26.0
Q ss_pred HHHHHHHHHHHHhccCCCCCCCCCCCCCCCceEEeeccchHHHHHH
Q 039671 18 EDSWAALNWVASHAGGNGPEPWLNDHADFGRVFIGGGSAGGNIAHT 63 (195)
Q Consensus 18 ~D~~~a~~~l~~~~~~~~~~~~~~~~~d~~~i~l~G~S~Gg~la~~ 63 (195)
.++.++++|.... +..+.|+|+|||-=|.+.+.
T Consensus 65 ~~~~asleyAv~~-------------L~v~~IvV~GHs~CGav~a~ 97 (182)
T cd00883 65 LNCLSVLQYAVDV-------------LKVKHIIVCGHYGCGGVKAA 97 (182)
T ss_pred cchhhhHHHHHHh-------------cCCCEEEEecCCCchHHHHH
Confidence 3578899999887 66789999999987765543
No 259
>cd00382 beta_CA Carbonic anhydrases (CA) are zinc-containing enzymes that catalyze the reversible hydration of carbon dioxide in a two-step mechanism in which the nucleophilic attack of a zinc-bound hydroxide ion on carbon dioxide is followed by the regeneration of an active site by ionization of the zinc-bound water molecule and removal of a proton from the active site. CAs are ubiquitous enzymes involved in fundamental processes like photosynthesis, respiration, pH homeostasis and ion transport. There are three evolutionarily distinct families of CAs (the alpha-, beta-, and gamma-CAs) which show no significant sequence identity or structural similarity. Within the beta-CA family there are four evolutionarily distinct clades (A through D). The beta-CAs are multimeric enzymes (forming dimers,tetramers,hexamers and octamers) which are present in higher plants, algae, fungi, archaea and prokaryotes.
Probab=52.78 E-value=25 Score=23.48 Aligned_cols=32 Identities=16% Similarity=0.266 Sum_probs=25.5
Q ss_pred HHHHHHHHHHHHHhccCCCCCCCCCCCCCCCceEEeeccchHHHH
Q 039671 17 YEDSWAALNWVASHAGGNGPEPWLNDHADFGRVFIGGGSAGGNIA 61 (195)
Q Consensus 17 ~~D~~~a~~~l~~~~~~~~~~~~~~~~~d~~~i~l~G~S~Gg~la 61 (195)
..++.++++|.... ...+.|+|+|||--|.+.
T Consensus 42 ~~~~~~sl~~av~~-------------l~v~~ivV~gHt~CG~v~ 73 (119)
T cd00382 42 DLDVLASLEYAVEV-------------LGVKHIIVCGHTDCGAVK 73 (119)
T ss_pred cccHHHHHHHHHHh-------------hCCCEEEEEccCCCcHHH
Confidence 34688899998887 567899999998777654
No 260
>cd07222 Pat_PNPLA4 Patatin-like phospholipase domain containing protein 4. PNPLA4, also known as GS2 (gene sequence-2), shows both lipase and transacylation activities. GS2 lipase is expressed in various tissues, predominantly in muscle and adipocytes tissue. It is also expressed in keratinocytes and shows retinyl ester hydrolase, acylglycerol, TG hydrolase, and PLA2 activity. This family includes patatin-like proteins: GS2 from mammals, PNPLA4 (Patatin-like phospholipase domain-containing protein 4), and iPLA2-eta (Calcium-independent phospholipase A2) from Homo sapiens.
Probab=52.55 E-value=18 Score=27.55 Aligned_cols=17 Identities=35% Similarity=0.380 Sum_probs=14.9
Q ss_pred EEeeccchHHHHHHHHH
Q 039671 50 FIGGGSAGGNIAHTLAF 66 (195)
Q Consensus 50 ~l~G~S~Gg~la~~~a~ 66 (195)
.+.|-|+|+..|+.++.
T Consensus 34 ~i~GtSaGAl~aa~~a~ 50 (246)
T cd07222 34 RFAGASAGSLVAAVLLT 50 (246)
T ss_pred EEEEECHHHHHHHHHhc
Confidence 69999999999988863
No 261
>PF05116 S6PP: Sucrose-6F-phosphate phosphohydrolase; InterPro: IPR006380 This family of sequences represent sucrose phosphate phosphohydrolase (SPP) from plants and cyanobacteria []. SPP is a member of the Class IIB subfamily of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. SPP catalyzes the final step in the biosynthesis of sucrose, a critically important molecule for plants. Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.; PDB: 1TJ5_A 2B1Q_A 1TJ4_A 1S2O_A 1U2T_A 2D2V_A 1TJ3_A 1U2S_A 2B1R_A 3GYG_B ....
Probab=50.58 E-value=16 Score=27.83 Aligned_cols=25 Identities=28% Similarity=0.373 Sum_probs=18.9
Q ss_pred HHHHHHHHHhccCCCCCCCCCCCCCCCceEEeeccc
Q 039671 21 WAALNWVASHAGGNGPEPWLNDHADFGRVFIGGGSA 56 (195)
Q Consensus 21 ~~a~~~l~~~~~~~~~~~~~~~~~d~~~i~l~G~S~ 56 (195)
..|++||.+... ++.++++++|+|-
T Consensus 167 ~~Al~~L~~~~~-----------~~~~~vl~aGDSg 191 (247)
T PF05116_consen 167 GAALRYLMERWG-----------IPPEQVLVAGDSG 191 (247)
T ss_dssp HHHHHHHHHHHT-------------GGGEEEEESSG
T ss_pred HHHHHHHHHHhC-----------CCHHHEEEEeCCC
Confidence 468889988754 7889999999993
No 262
>cd07225 Pat_PNPLA6_PNPLA7 Patatin-like phospholipase domain containing protein 6 and protein 7. Patatin-like phospholipase domain containing protein 6 (PNPLA6) and protein 7 (PNPLA7) are 60% identical to each other. PNPLA6 is commonly known as Neuropathy Target Esterase (NTE). NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. PNPLA7 is an insulin-regulated phospholipase that is homologous to Neuropathy Target Esterase (NTE or PNPLA6) and is also known as NTE-related esterase (NRE). Human NRE is predominantly expressed in prostate, white adipose, and pancreatic tissue. NRE
Probab=50.10 E-value=21 Score=28.18 Aligned_cols=19 Identities=32% Similarity=0.386 Sum_probs=15.9
Q ss_pred eEEeeccchHHHHHHHHHH
Q 039671 49 VFIGGGSAGGNIAHTLAFQ 67 (195)
Q Consensus 49 i~l~G~S~Gg~la~~~a~~ 67 (195)
=.|+|-|+|+.+++.++..
T Consensus 45 d~v~GtSaGAi~ga~ya~g 63 (306)
T cd07225 45 DMVGGTSIGAFIGALYAEE 63 (306)
T ss_pred CEEEEECHHHHHHHHHHcC
Confidence 4589999999999987755
No 263
>TIGR02240 PHA_depoly_arom poly(3-hydroxyalkanoate) depolymerase. This family consists of the polyhydroxyalkanoic acid (PHA) depolymerase of Pseudomonas oleovorans, Pseudomonas putida BM01, and related species. This enzyme is part of polyester storage and mobilization system as in many bacteria. However, species containing this enzyme are unusual in their capacity to produce aromatic polyesters when grown on carbon sources such as benzoic acid or phenylacetic acid.
Probab=49.99 E-value=91 Score=23.61 Aligned_cols=61 Identities=15% Similarity=0.081 Sum_probs=30.3
Q ss_pred CCEEEEEcCCccchhhHHHHHHHHHhcCCCccEEEEEecCCCccccccCCCchHHHHHHHHHHHHHH
Q 039671 127 ERVLIFVAEKDFLKPVAMNYYEDLKKSGWKGTVELVETHGEGHSFYFDNLKCEKAVELINKFVSFIT 193 (195)
Q Consensus 127 pp~~i~~g~~D~l~~~~~~~~~~l~~~~~g~~~~~~~~~g~~H~f~~~~~~~~~~~~~~~~~~~fl~ 193 (195)
||++++||--..... -..+.+.|. ..++++.+.--+||...............+.+.++++
T Consensus 26 ~plvllHG~~~~~~~-w~~~~~~L~-----~~~~vi~~Dl~G~G~S~~~~~~~~~~~~~~~~~~~i~ 86 (276)
T TIGR02240 26 TPLLIFNGIGANLEL-VFPFIEALD-----PDLEVIAFDVPGVGGSSTPRHPYRFPGLAKLAARMLD 86 (276)
T ss_pred CcEEEEeCCCcchHH-HHHHHHHhc-----cCceEEEECCCCCCCCCCCCCcCcHHHHHHHHHHHHH
Confidence 589999995543221 122333342 3356777776678765332111122344444444544
No 264
>cd07228 Pat_NTE_like_bacteria Bacterial patatin-like phospholipase domain containing protein 6. Bacterial patatin-like phospholipase domain containing protein 6. PNPLA6 is commonly known as Neuropathy Target Esterase (NTE). NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. This group includes YCHK and rssA from Escherichia coli as well as Ylbk from Bacillus amyloliquefaciens.
Probab=49.90 E-value=13 Score=26.42 Aligned_cols=20 Identities=25% Similarity=0.230 Sum_probs=16.7
Q ss_pred eEEeeccchHHHHHHHHHHh
Q 039671 49 VFIGGGSAGGNIAHTLAFQV 68 (195)
Q Consensus 49 i~l~G~S~Gg~la~~~a~~~ 68 (195)
=.++|-|+|+.+|+.++...
T Consensus 30 d~i~GtSaGAi~aa~~a~g~ 49 (175)
T cd07228 30 DIIAGSSIGALVGALYAAGH 49 (175)
T ss_pred eEEEEeCHHHHHHHHHHcCC
Confidence 46999999999998887654
No 265
>KOG1202 consensus Animal-type fatty acid synthase and related proteins [Lipid transport and metabolism]
Probab=49.69 E-value=46 Score=31.90 Aligned_cols=36 Identities=19% Similarity=0.158 Sum_probs=27.0
Q ss_pred ceEEeeccchHHHHHHHHHHhccCCCCCCceeEEEeeccc
Q 039671 48 RVFIGGGSAGGNIAHTLAFQVGSIGLPRVKLVGVIMVHPF 87 (195)
Q Consensus 48 ~i~l~G~S~Gg~la~~~a~~~~~~~~~~~~~~~~i~~~p~ 87 (195)
..-|+|.|.|++++..++....... ....+|++.|.
T Consensus 2183 PYrl~GYSyG~~l~f~ma~~Lqe~~----~~~~lillDGs 2218 (2376)
T KOG1202|consen 2183 PYRLAGYSYGACLAFEMASQLQEQQ----SPAPLILLDGS 2218 (2376)
T ss_pred CeeeeccchhHHHHHHHHHHHHhhc----CCCcEEEecCc
Confidence 5669999999999998888776533 33457877654
No 266
>PLN03006 carbonate dehydratase
Probab=49.07 E-value=26 Score=27.65 Aligned_cols=31 Identities=23% Similarity=0.311 Sum_probs=25.5
Q ss_pred HHHHHHHHHHhccCCCCCCCCCCCCCCCceEEeeccchHHHHHH
Q 039671 20 SWAALNWVASHAGGNGPEPWLNDHADFGRVFIGGGSAGGNIAHT 63 (195)
Q Consensus 20 ~~~a~~~l~~~~~~~~~~~~~~~~~d~~~i~l~G~S~Gg~la~~ 63 (195)
+.++++|...+ +..+.|+|+|||.=|.+.+.
T Consensus 158 ~~aSLEYAV~~-------------L~V~~IVV~GHs~CGaV~Aa 188 (301)
T PLN03006 158 TKAALEFSVNT-------------LNVENILVIGHSRCGGIQAL 188 (301)
T ss_pred hhhhHHHHHHH-------------hCCCEEEEecCCCchHHHHH
Confidence 67899999988 67789999999987765543
No 267
>PRK05077 frsA fermentation/respiration switch protein; Reviewed
Probab=49.03 E-value=1.1e+02 Score=25.18 Aligned_cols=62 Identities=8% Similarity=0.008 Sum_probs=35.2
Q ss_pred CEEEEEcCCccch-hhHHHHHHHHHhcCCCccEEEEEecCCCccccccCCCchHHHHHHHHHHHHHH
Q 039671 128 RVLIFVAEKDFLK-PVAMNYYEDLKKSGWKGTVELVETHGEGHSFYFDNLKCEKAVELINKFVSFIT 193 (195)
Q Consensus 128 p~~i~~g~~D~l~-~~~~~~~~~l~~~~~g~~~~~~~~~g~~H~f~~~~~~~~~~~~~~~~~~~fl~ 193 (195)
|++|++|+.|... +.-..+.+.|.+. |..+-...++| |+.................+++|+.
T Consensus 195 P~Vli~gG~~~~~~~~~~~~~~~La~~--Gy~vl~~D~pG--~G~s~~~~~~~d~~~~~~avld~l~ 257 (414)
T PRK05077 195 PTVLVCGGLDSLQTDYYRLFRDYLAPR--GIAMLTIDMPS--VGFSSKWKLTQDSSLLHQAVLNALP 257 (414)
T ss_pred cEEEEeCCcccchhhhHHHHHHHHHhC--CCEEEEECCCC--CCCCCCCCccccHHHHHHHHHHHHH
Confidence 6999999988654 3344567788888 55555555555 5433221111223333456677765
No 268
>PF01734 Patatin: Patatin-like phospholipase This Prosite family is a subset of the Pfam family; InterPro: IPR002641 This domain is structurally and functionally related to the animal cytosolic phospholipase A2. This domain is found in the patatin glycoproteins from the total soluble protein in potato tubers []. Patatin is a storage protein but it also has the enzymatic activity of lipid acyl hydrolase, catalysing the cleavage of fatty acids from membrane lipids [].; GO: 0006629 lipid metabolic process; PDB: 3TU3_B 4AKX_B 1OXW_A.
Probab=48.88 E-value=15 Score=25.77 Aligned_cols=22 Identities=36% Similarity=0.235 Sum_probs=16.5
Q ss_pred CceEEeeccchHHHHHHHHHHh
Q 039671 47 GRVFIGGGSAGGNIAHTLAFQV 68 (195)
Q Consensus 47 ~~i~l~G~S~Gg~la~~~a~~~ 68 (195)
.--.|+|-|+||.+|+.++...
T Consensus 27 ~~d~i~GtS~Gal~a~~~~~~~ 48 (204)
T PF01734_consen 27 RFDVISGTSAGALNAALLALGY 48 (204)
T ss_dssp T-SEEEEECCHHHHHHHHHTC-
T ss_pred CccEEEEcChhhhhHHHHHhCC
Confidence 3456999999999998777663
No 269
>PRK13690 hypothetical protein; Provisional
Probab=48.73 E-value=28 Score=25.13 Aligned_cols=31 Identities=19% Similarity=0.249 Sum_probs=24.9
Q ss_pred chHHHHHHHHHHHHHhccCCCCCCCCCCCCCCCceEEeeccc
Q 039671 15 ACYEDSWAALNWVASHAGGNGPEPWLNDHADFGRVFIGGGSA 56 (195)
Q Consensus 15 ~~~~D~~~a~~~l~~~~~~~~~~~~~~~~~d~~~i~l~G~S~ 56 (195)
+.-+|+..++..+.+.+. +.+.+|+++|+|.
T Consensus 5 ~i~~~~~~~~~El~~~a~-----------l~~g~i~VvGcST 35 (184)
T PRK13690 5 EIKKQTRQILEELLEQAN-----------LKPGQIFVLGCST 35 (184)
T ss_pred HHHHHHHHHHHHHHHhhC-----------CCCCCEEEEecch
Confidence 456788888888888764 6788999999995
No 270
>COG4822 CbiK Cobalamin biosynthesis protein CbiK, Co2+ chelatase [Coenzyme metabolism]
Probab=48.66 E-value=1.2e+02 Score=22.98 Aligned_cols=113 Identities=11% Similarity=0.109 Sum_probs=62.0
Q ss_pred HHHHHHHHHHHHHhccCCCCCCCCCCCCCCCceEEeeccchHHHHHHHH-HHh--ccCCCCCCceeEEEeeccccCCCCc
Q 039671 17 YEDSWAALNWVASHAGGNGPEPWLNDHADFGRVFIGGGSAGGNIAHTLA-FQV--GSIGLPRVKLVGVIMVHPFFGGTSP 93 (195)
Q Consensus 17 ~~D~~~a~~~l~~~~~~~~~~~~~~~~~d~~~i~l~G~S~Gg~la~~~a-~~~--~~~~~~~~~~~~~i~~~p~~~~~~~ 93 (195)
.+|...+++-++++...+. ..+.++++||-.--+...+++ ..+ ...+..+ -+-+.+-.+|-++.
T Consensus 117 k~DYe~~v~aik~~~ppl~---------k~e~~vlmgHGt~h~s~~~YacLd~~~~~~~f~~-v~v~~ve~yP~~d~--- 183 (265)
T COG4822 117 KNDYEICVEAIKDQIPPLN---------KDEILVLMGHGTDHHSNAAYACLDHVLDEYGFDN-VFVAAVEGYPLVDT--- 183 (265)
T ss_pred hhhHHHHHHHHHHhcCCcC---------cCeEEEEEecCCCccHHHHHHHHHHHHHhcCCCc-eEEEEecCCCcHHH---
Confidence 4888899999988865332 345688899855443333222 221 1222211 22233444554433
Q ss_pred cHHHHHHhhCCCCCCCCCCCCCCChhhhcccCCCCEEEEEcCC---ccchhhHHHHHHHHHhcCCCccEEEE
Q 039671 94 EEDEMWLYMCPTNGGLQDPRLKPPAEDLARLGCERVLIFVAEK---DFLKPVAMNYYEDLKKSGWKGTVELV 162 (195)
Q Consensus 94 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~pp~~i~~g~~---D~l~~~~~~~~~~l~~~~~g~~~~~~ 162 (195)
...++-. ..++....-|++++.|.+ |.--+....+...|+++ |.+++.+
T Consensus 184 ----vi~~l~~--------------~~~~~v~L~PlMlvAG~Ha~nDMasddedswk~il~~~--G~~v~~~ 235 (265)
T COG4822 184 ----VIEYLRK--------------NGIKEVHLIPLMLVAGDHAKNDMASDDEDSWKNILEKN--GFKVEVY 235 (265)
T ss_pred ----HHHHHHH--------------cCCceEEEeeeEEeechhhhhhhcccchHHHHHHHHhC--CceeEEE
Confidence 1111100 011112223799999976 55556678898999999 6787655
No 271
>TIGR01250 pro_imino_pep_2 proline-specific peptidases, Bacillus coagulans-type subfamily. This model describes a subfamily of the alpha/beta fold family of hydrolases. Characterized members include prolinases (Pro-Xaa dipeptidase, EC 3.4.13.8), prolyl aminopeptidases (EC 3.4.11.5), and a leucyl aminopeptidase
Probab=48.37 E-value=1.1e+02 Score=22.63 Aligned_cols=40 Identities=20% Similarity=0.206 Sum_probs=21.8
Q ss_pred CCEEEEEcCCccchhhHHHHHHHHHhcCCCccEEEEEecCCC
Q 039671 127 ERVLIFVAEKDFLKPVAMNYYEDLKKSGWKGTVELVETHGEG 168 (195)
Q Consensus 127 pp~~i~~g~~D~l~~~~~~~~~~l~~~~~g~~~~~~~~~g~~ 168 (195)
||++++||.-..-...-..+...+++. |..+-....+|.+
T Consensus 26 ~~vl~~hG~~g~~~~~~~~~~~~l~~~--g~~vi~~d~~G~G 65 (288)
T TIGR01250 26 IKLLLLHGGPGMSHEYLENLRELLKEE--GREVIMYDQLGCG 65 (288)
T ss_pred CeEEEEcCCCCccHHHHHHHHHHHHhc--CCEEEEEcCCCCC
Confidence 579999996433222333455566665 3444444445433
No 272
>COG3007 Uncharacterized paraquat-inducible protein B [Function unknown]
Probab=48.25 E-value=44 Score=26.43 Aligned_cols=42 Identities=17% Similarity=0.279 Sum_probs=30.6
Q ss_pred HHHHHHHHHHHhccCCCCCCCCCCCCCCCceEEeeccchHHHHHHHHHHhc
Q 039671 19 DSWAALNWVASHAGGNGPEPWLNDHADFGRVFIGGGSAGGNIAHTLAFQVG 69 (195)
Q Consensus 19 D~~~a~~~l~~~~~~~~~~~~~~~~~d~~~i~l~G~S~Gg~la~~~a~~~~ 69 (195)
.+..-++|......-- -.|.||.|+|.|.|=.||..++..-.
T Consensus 23 nV~~QI~y~k~~gp~~---------ngPKkVLviGaSsGyGLa~RIsaaFG 64 (398)
T COG3007 23 NVLQQIDYVKAAGPIK---------NGPKKVLVIGASSGYGLAARISAAFG 64 (398)
T ss_pred HHHHHHHHHHhcCCcc---------CCCceEEEEecCCcccHHHHHHHHhC
Confidence 4555667777654321 25889999999999999997776654
No 273
>cd07211 Pat_PNPLA8 Patatin-like phospholipase domain containing protein 8. PNPLA8 is a Ca-independent myocardial phospholipase which maintains mitochondrial integrity. PNPLA8 is also known as iPLA2-gamma. In humans, it is predominantly expressed in heart tissue. iPLA2-gamma can catalyze both phospholipase A1 and A2 reactions (PLA1 and PLA2 respectively). This family includes PNPLA8 (iPLA2-gamma) from Homo sapiens and iPLA2-2 from Mus musculus.
Probab=48.00 E-value=14 Score=28.97 Aligned_cols=17 Identities=35% Similarity=0.546 Sum_probs=15.1
Q ss_pred EEeeccchHHHHHHHHH
Q 039671 50 FIGGGSAGGNIAHTLAF 66 (195)
Q Consensus 50 ~l~G~S~Gg~la~~~a~ 66 (195)
.|+|-|.||.+|+.++.
T Consensus 44 li~GTStGgiiA~~la~ 60 (308)
T cd07211 44 YICGVSTGAILAFLLGL 60 (308)
T ss_pred EEEecChhHHHHHHHhc
Confidence 49999999999998875
No 274
>PF05577 Peptidase_S28: Serine carboxypeptidase S28; InterPro: IPR008758 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S28 (clan SC). The predicted active site residues for members of this family and family S10 occur in the same order in the sequence: S, D, H. These serine proteases include several eukaryotic enzymes such as lysosomal Pro-X carboxypeptidase, dipeptidyl-peptidase II, and thymus-specific serine peptidase [, , , ].; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 3N2Z_B 3JYH_A 3N0T_C.
Probab=47.81 E-value=40 Score=27.84 Aligned_cols=43 Identities=16% Similarity=0.117 Sum_probs=25.4
Q ss_pred CCEEEEEcCCccchhhHHHHHHHHHhcCCCccEEEEEecCCCccccccCC
Q 039671 127 ERVLIFVAEKDFLKPVAMNYYEDLKKSGWKGTVELVETHGEGHSFYFDNL 176 (195)
Q Consensus 127 pp~~i~~g~~D~l~~~~~~~~~~l~~~~~g~~~~~~~~~g~~H~f~~~~~ 176 (195)
..+++++|+.|+-..-+ ..... ...+...++||+.|..+....
T Consensus 377 tnviFtNG~~DPW~~lg-----v~~~~--~~~~~~~~I~g~~Hc~Dl~~~ 419 (434)
T PF05577_consen 377 TNVIFTNGELDPWRALG-----VTSDS--SDSVPAIVIPGGAHCSDLYPP 419 (434)
T ss_dssp -SEEEEEETT-CCGGGS-------S-S--SSSEEEEEETT--TTGGGS--
T ss_pred CeEEeeCCCCCCccccc-----CCCCC--CCCcccEEECCCeeeccccCC
Confidence 36999999999977654 22223 345666789999997766643
No 275
>KOG2385 consensus Uncharacterized conserved protein [Function unknown]
Probab=46.32 E-value=90 Score=26.84 Aligned_cols=45 Identities=13% Similarity=0.033 Sum_probs=29.7
Q ss_pred CCCceEEeeccchHHHHHHHHHHhccCCCCCCceeEEEeeccccCC
Q 039671 45 DFGRVFIGGGSAGGNIAHTLAFQVGSIGLPRVKLVGVIMVHPFFGG 90 (195)
Q Consensus 45 d~~~i~l~G~S~Gg~la~~~a~~~~~~~~~~~~~~~~i~~~p~~~~ 90 (195)
..++|.|+|+|.|+-..........+.+ .-.-+..++++..+...
T Consensus 445 G~RPVTLVGFSLGARvIf~CL~~Lakkk-e~~iIEnViL~GaPv~~ 489 (633)
T KOG2385|consen 445 GNRPVTLVGFSLGARVIFECLLELAKKK-EVGIIENVILFGAPVPT 489 (633)
T ss_pred CCCceeEeeeccchHHHHHHHHHHhhcc-cccceeeeeeccCCccC
Confidence 4578999999999977765555444311 11257788888755544
No 276
>cd07213 Pat17_PNPLA8_PNPLA9_like1 Patatin-like phospholipase. Patatin is a storage protein of the potato tuber that shows Phospholipase A2 activity (PLA2; EC 3.1.1.4). Patatin catalyzes the nonspecific hydrolysis of phospholipids, glycolipids, sulfolipids, and mono- and diacylglycerols, thereby showing lipid acyl hydrolase activity. The active site includes an oxyanion hole with a conserved GGxR motif; it is found in almost all the members of this family. The catalytic dyad is formed by a serine and an aspartate. Patatin belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue and Nu = nucleophile). Members of this family have been found also in vertebrates. This family includes subfamily of PNPLA8 (iPLA2-gamma) and PNPLA9 (iPLA2-beta) like phospholipases from human as well as the Pat17 isozyme from Solanum cardiophyllum.
Probab=46.22 E-value=16 Score=28.50 Aligned_cols=19 Identities=42% Similarity=0.480 Sum_probs=16.4
Q ss_pred EEeeccchHHHHHHHHHHh
Q 039671 50 FIGGGSAGGNIAHTLAFQV 68 (195)
Q Consensus 50 ~l~G~S~Gg~la~~~a~~~ 68 (195)
.++|-|+||.+|+.++...
T Consensus 37 ~i~GTSaGaiia~~la~g~ 55 (288)
T cd07213 37 LFAGTSAGSLIALGLALGY 55 (288)
T ss_pred EEEEeCHHHHHHHHHHcCc
Confidence 6999999999999888653
No 277
>cd07220 Pat_PNPLA2 Patatin-like phospholipase domain containing protein 2. PNPLA2 plays a key role in hydrolysis of stored triacylglecerols and is also known as adipose triglyceride lipase (ATGL). Members of this family share a patain domain, initially discovered in potato tubers. ATGL is expressed in white and brown adipose tissue in high mRNA levels. Mutations in PNPLA2 encoding adipose triglyceride lipase (ATGL) leads to neutral lipid storage disease (NLSD) which is characterized by the accumulation of triglycerides in multiple tissues. ATGL mutations are also commonly associated with severe forms of skeletal- and cardio-myopathy. This family includes patatin-like proteins: TTS-2.2 (transport-secretion protein 2.2), PNPLA2 (Patatin-like phospholipase domain-containing protein 2), and iPLA2-zeta (Calcium-independent phospholipase A2) from Homo sapiens.
Probab=45.93 E-value=29 Score=26.58 Aligned_cols=20 Identities=40% Similarity=0.283 Sum_probs=15.9
Q ss_pred eEEeeccchHHHHHHHHHHh
Q 039671 49 VFIGGGSAGGNIAHTLAFQV 68 (195)
Q Consensus 49 i~l~G~S~Gg~la~~~a~~~ 68 (195)
-.++|-|||+..|+.++...
T Consensus 38 ~~i~G~SAGAl~aa~~a~g~ 57 (249)
T cd07220 38 RKIYGASAGALTATALVTGV 57 (249)
T ss_pred CeEEEEcHHHHHHHHHHcCC
Confidence 45889999999998777553
No 278
>COG0331 FabD (acyl-carrier-protein) S-malonyltransferase [Lipid metabolism]
Probab=44.95 E-value=39 Score=26.83 Aligned_cols=45 Identities=27% Similarity=0.172 Sum_probs=29.8
Q ss_pred CCCCCchHHHHHHHHHHHHHhccCCCCCCCCCCCCCCCceEEeeccchHHHHHHHHH
Q 039671 10 DRPIPACYEDSWAALNWVASHAGGNGPEPWLNDHADFGRVFIGGGSAGGNIAHTLAF 66 (195)
Q Consensus 10 ~~~~p~~~~D~~~a~~~l~~~~~~~~~~~~~~~~~d~~~i~l~G~S~Gg~la~~~a~ 66 (195)
+.+.|..+-=-.++++-+.+.. .+....++.|||.|=+-|+.++.
T Consensus 60 ~~tQPal~~~s~a~~~~l~~~~------------~~~~p~~~aGHSlGEysAl~~ag 104 (310)
T COG0331 60 QNTQPALLLVSLAAYRVLAEQG------------LGVKPDFVAGHSLGEYSALAAAG 104 (310)
T ss_pred chhhHHHHHHHHHHHHHHHHhc------------CCCCCceeecccHhHHHHHHHcc
Confidence 3445555555555566666542 24567799999999988886664
No 279
>PF11713 Peptidase_C80: Peptidase C80 family; InterPro: IPR020974 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Cysteine peptidases have characteristic molecular topologies, which can be seen not only in their three-dimensional structures, but commonly also in the two-dimensional structures. These are peptidases in which the nucleophile is the sulphydryl group of a cysteine residue. Cysteine proteases are divided into clans (proteins which are evolutionary related), and further sub-divided into families, on the basis of the architecture of their catalytic dyad or triad []. This entry identifies a domain that functions as a cysteine peptidase that belongs to MEROPS peptidase family C80 (RTX self-cleaving toxin, clan CD). This domain is found in bacterial toxins that self-process by a cysteine peptidase mechanism. These include Vibrio cholerae RTX toxin [], and Clostridium difficile toxins A and B []. Some pathogenic bacteria produce unrelated toxins that also require activation and processing, the processing often being autolytic as it is in anthrax lethal factor, tentoxilysin (the tetanus neurotoxin) and bontoxilysin (the botulinum neurotoxin), all of which are metallopeptidases.; PDB: 3GCD_C 3EEB_B 3FZY_A 3PEE_A 3PA8_B 3HO6_A.
Probab=44.55 E-value=29 Score=24.48 Aligned_cols=16 Identities=19% Similarity=0.154 Sum_probs=11.4
Q ss_pred CCCCceEEeeccchHH
Q 039671 44 ADFGRVFIGGGSAGGN 59 (195)
Q Consensus 44 ~d~~~i~l~G~S~Gg~ 59 (195)
..|++|.|+|+|++..
T Consensus 101 ~~P~~IsLvGC~l~~~ 116 (157)
T PF11713_consen 101 ISPKKISLVGCSLADN 116 (157)
T ss_dssp --ESEEEEESSS-S-T
T ss_pred CCCCEEEEEEecccCC
Confidence 5789999999999987
No 280
>TIGR01440 conserved hypothetical protein TIGR01440. Members of this family are uncharacterized proteins of about 180 amino acids from the Bacillus/Clostridium group of Gram-positive bacteria, found in no more than one copy per genome.
Probab=44.48 E-value=34 Score=24.43 Aligned_cols=27 Identities=19% Similarity=0.203 Sum_probs=20.5
Q ss_pred HHHHHHHHHHHhccCCCCCCCCCCCCCCCceEEeeccc
Q 039671 19 DSWAALNWVASHAGGNGPEPWLNDHADFGRVFIGGGSA 56 (195)
Q Consensus 19 D~~~a~~~l~~~~~~~~~~~~~~~~~d~~~i~l~G~S~ 56 (195)
|+..++..+.+... +...+++++|+|.
T Consensus 2 ~~~~~~~El~~~a~-----------l~~g~i~VvGcST 28 (172)
T TIGR01440 2 QLTTVLEELKDASN-----------LKKGDLFVIGCST 28 (172)
T ss_pred hHHHHHHHHHHhhC-----------CCCCCEEEEecch
Confidence 56667777777654 6778999999994
No 281
>cd07209 Pat_hypo_Ecoli_Z1214_like Hypothetical patatin similar to Z1214 protein of Escherichia coli. Patatin-like phospholipase similar to Z1214 protein of Escherichia coli. This family predominantly consists of bacterial patatin glycoproteins and some representatives from eukaryotes and archaea. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have also been found in vertebrates.
Probab=44.29 E-value=18 Score=26.83 Aligned_cols=20 Identities=25% Similarity=0.092 Sum_probs=17.1
Q ss_pred eEEeeccchHHHHHHHHHHh
Q 039671 49 VFIGGGSAGGNIAHTLAFQV 68 (195)
Q Consensus 49 i~l~G~S~Gg~la~~~a~~~ 68 (195)
=.+.|-|+|+.+|+.++...
T Consensus 28 d~i~GtS~GAl~aa~~a~~~ 47 (215)
T cd07209 28 DIISGTSIGAINGALIAGGD 47 (215)
T ss_pred CEEEEECHHHHHHHHHHcCC
Confidence 36999999999999888765
No 282
>cd07208 Pat_hypo_Ecoli_yjju_like Hypothetical patatin similar to yjju protein of Escherichia coli. Patatin-like phospholipase similar to yjju protein of Escherichia coli. This family predominantly consists of bacterial patatin glycoproteins, and some representatives from eukaryotes and archaea. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have also been found in vertebrates.
Probab=44.01 E-value=18 Score=27.66 Aligned_cols=20 Identities=25% Similarity=0.092 Sum_probs=16.9
Q ss_pred EEeeccchHHHHHHHHHHhc
Q 039671 50 FIGGGSAGGNIAHTLAFQVG 69 (195)
Q Consensus 50 ~l~G~S~Gg~la~~~a~~~~ 69 (195)
.++|-|+|+.+|+.++....
T Consensus 30 ~i~GtSaGAi~a~~~~~g~~ 49 (266)
T cd07208 30 LVIGVSAGALNAASYLSGQR 49 (266)
T ss_pred EEEEECHHHHhHHHHHhCCc
Confidence 69999999999998876643
No 283
>cd00884 beta_CA_cladeB Carbonic anhydrases (CA) are zinc-containing enzymes that catalyze the reversible hydration of carbon dioxide in a two-step mechanism in which the nucleophilic attack of a zinc-bound hydroxide ion on carbon dioxide is followed by the regeneration of an active site by ionization of the zinc-bound water molecule and removal of a proton from the active site. CAs are ubiquitous enzymes involved in fundamental processes like photosynthesis, respiration, pH homeostasis and ion transport. There are three evolutionarily distinct families of CAs (the alpha-, beta-, and gamma-CAs) which show no significant sequence identity or structural similarity. Within the beta-CA family there are four evolutionarily distinct clades (A through D). The beta-CAs are multimeric enzymes (forming dimers,tetramers,hexamers and octamers) which are present in higher plants, algae, fungi, archaea and prokaryotes.
Probab=43.95 E-value=38 Score=24.76 Aligned_cols=33 Identities=21% Similarity=0.316 Sum_probs=25.7
Q ss_pred HHHHHHHHHHHhccCCCCCCCCCCCCCCCceEEeeccchHHHHHHH
Q 039671 19 DSWAALNWVASHAGGNGPEPWLNDHADFGRVFIGGGSAGGNIAHTL 64 (195)
Q Consensus 19 D~~~a~~~l~~~~~~~~~~~~~~~~~d~~~i~l~G~S~Gg~la~~~ 64 (195)
.+.++++|.... ...+.|+|+|||-=|.+.+.+
T Consensus 72 ~~~asleyav~~-------------l~v~~ivV~GH~~Cgav~Aa~ 104 (190)
T cd00884 72 GTSAAIEYAVAV-------------LKVEHIVVCGHSDCGGIRALL 104 (190)
T ss_pred chhhhHHHHHHH-------------hCCCEEEEeCCCcchHHHHHh
Confidence 367899999888 567899999999866555433
No 284
>PLN02578 hydrolase
Probab=43.79 E-value=96 Score=24.77 Aligned_cols=62 Identities=8% Similarity=-0.020 Sum_probs=32.5
Q ss_pred CCEEEEEcCCccchhhHHHHHHHHHhcCCCccEEEEEecCCCccccccCCCchHHHHHHHHHHHHHHh
Q 039671 127 ERVLIFVAEKDFLKPVAMNYYEDLKKSGWKGTVELVETHGEGHSFYFDNLKCEKAVELINKFVSFITQ 194 (195)
Q Consensus 127 pp~~i~~g~~D~l~~~~~~~~~~l~~~~~g~~~~~~~~~g~~H~f~~~~~~~~~~~~~~~~~~~fl~~ 194 (195)
||++++||--...... ......|. ..++++.+.-.+|+........-....+.+++.+|+++
T Consensus 87 ~~vvliHG~~~~~~~w-~~~~~~l~-----~~~~v~~~D~~G~G~S~~~~~~~~~~~~a~~l~~~i~~ 148 (354)
T PLN02578 87 LPIVLIHGFGASAFHW-RYNIPELA-----KKYKVYALDLLGFGWSDKALIEYDAMVWRDQVADFVKE 148 (354)
T ss_pred CeEEEECCCCCCHHHH-HHHHHHHh-----cCCEEEEECCCCCCCCCCcccccCHHHHHHHHHHHHHH
Confidence 5899999976532211 12223332 23566666666787654322111234455667777654
No 285
>PF08484 Methyltransf_14: C-methyltransferase C-terminal domain; InterPro: IPR013691 This domain is found in bacterial C-methyltransferase proteins, often together with other methyltransferase domains such as IPR013216 from INTERPRO or IPR013217 from INTERPRO. ; PDB: 4E2X_A 3NDJ_A 3NDI_A 4E32_A 4E33_A 4E31_A 4E2Y_A 4E2W_A 4E2Z_A 4E30_A.
Probab=43.74 E-value=31 Score=24.44 Aligned_cols=37 Identities=19% Similarity=0.034 Sum_probs=18.4
Q ss_pred CCCceEEeeccchHHHHHHHHHHhccCCCCCCceeEEEeeccc
Q 039671 45 DFGRVFIGGGSAGGNIAHTLAFQVGSIGLPRVKLVGVIMVHPF 87 (195)
Q Consensus 45 d~~~i~l~G~S~Gg~la~~~a~~~~~~~~~~~~~~~~i~~~p~ 87 (195)
...+|+++|.|+.|+.-+.++--..+ .+.+++-..|.
T Consensus 67 ~gk~I~~yGA~~kg~tlln~~g~~~~------~I~~vvD~np~ 103 (160)
T PF08484_consen 67 EGKRIAGYGAGAKGNTLLNYFGLDND------LIDYVVDDNPL 103 (160)
T ss_dssp TT--EEEE---SHHHHHHHHHT--TT------TS--EEES-GG
T ss_pred cCCEEEEECcchHHHHHHHHhCCCcc------eeEEEEeCChh
Confidence 45789999999999876665544322 47777766554
No 286
>cd07199 Pat17_PNPLA8_PNPLA9_like Patatin-like phospholipase; includes PNPLA8, PNPLA9, and Pat17. Patatin is a storage protein of the potato tuber that shows Phospholipase A2 activity (PLA2; EC 3.1.1.4). Patatin catalyzes the nonspecific hydrolysis of phospholipids, glycolipids, sulfolipids, and mono- and diacylglycerols, thereby showing lipid acyl hydrolase activity. The active site includes an oxyanion hole with a conserved GGxR motif; it is found in almost all the members of this family. The catalytic dyad is formed by a serine and an aspartate. Patatin belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue and Nu = nucleophile). Members of this family have been found also in vertebrates. This family includes subfamily of PNPLA8 (iPLA2-gamma) and PNPLA9 (iPLA2-beta) like phospholipases from human as well as the Pat17 isozyme from Solanum cardiophyllum.
Probab=43.67 E-value=17 Score=27.66 Aligned_cols=18 Identities=50% Similarity=0.667 Sum_probs=16.0
Q ss_pred EEeeccchHHHHHHHHHH
Q 039671 50 FIGGGSAGGNIAHTLAFQ 67 (195)
Q Consensus 50 ~l~G~S~Gg~la~~~a~~ 67 (195)
.++|-|+||.+|+.++..
T Consensus 37 ~i~GtS~G~iia~~l~~~ 54 (258)
T cd07199 37 LIAGTSTGGIIALGLALG 54 (258)
T ss_pred eeeeccHHHHHHHHHhcC
Confidence 589999999999988876
No 287
>cd07216 Pat17_PNPLA8_PNPLA9_like3 Patatin-like phospholipase. Patatin is a storage protein of the potato tuber that shows Phospholipase A2 activity (PLA2; EC 3.1.1.4). Patatin catalyzes the nonspecific hydrolysis of phospholipids, glycolipids, sulfolipids, and mono- and diacylglycerols, thereby showing lipid acyl hydrolase activity. The active site includes an oxyanion hole with a conserved GGxR motif; it is found in almost all the members of this family. The catalytic dyad is formed by a serine and an aspartate. Patatin belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue and Nu = nucleophile). Members of this family have been found also in vertebrates. This family includes subfamily of PNPLA8 (iPLA2-gamma) and PNPLA9 (iPLA2-beta) like phospholipases from human as well as the Pat17 isozyme from Solanum cardiophyllum.
Probab=43.50 E-value=15 Score=28.99 Aligned_cols=17 Identities=53% Similarity=0.706 Sum_probs=15.2
Q ss_pred EEeeccchHHHHHHHHH
Q 039671 50 FIGGGSAGGNIAHTLAF 66 (195)
Q Consensus 50 ~l~G~S~Gg~la~~~a~ 66 (195)
.|+|-|.||.+|+.++.
T Consensus 45 li~GTStGgiiA~~l~~ 61 (309)
T cd07216 45 LIGGTSTGGLIAIMLGR 61 (309)
T ss_pred eeeeccHHHHHHHHhcc
Confidence 79999999999998874
No 288
>cd07214 Pat17_isozyme_like Patatin-like phospholipase of plants. Pat17 is an isozyme of patatin cloned from Solanum cardiophyllum. Patatin is a storage protein of the potato tuber that shows Phospholipase A2 activity (PLA2; EC 3.1.1.4). Patatin catalyzes the nonspecific hydrolysis of phospholipids, glycolipids, sulfolipids, and mono- and diacylglycerols, thereby showing lipid acyl hydrolase activity. The active site includes an oxyanion hole with a conserved GGxR motif; it is found in almost all the members of this family. The catalytic dyad is formed by a serine and an aspartate. Patatin belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue, and Nu = nucleophile). Patatin-like phospholipase are included in this group. Members of this family have also been found in vertebrates.
Probab=43.43 E-value=17 Score=29.36 Aligned_cols=18 Identities=39% Similarity=0.527 Sum_probs=16.0
Q ss_pred EEeeccchHHHHHHHHHH
Q 039671 50 FIGGGSAGGNIAHTLAFQ 67 (195)
Q Consensus 50 ~l~G~S~Gg~la~~~a~~ 67 (195)
.|+|-|.||.+|+.++..
T Consensus 46 liaGTStGgiiA~~la~~ 63 (349)
T cd07214 46 VIAGTSTGGLITAMLTAP 63 (349)
T ss_pred EEeeCCHHHHHHHHHhcC
Confidence 699999999999988864
No 289
>KOG1455 consensus Lysophospholipase [Lipid transport and metabolism]
Probab=43.42 E-value=1.4e+02 Score=23.78 Aligned_cols=62 Identities=15% Similarity=0.041 Sum_probs=38.8
Q ss_pred EEEEEcCCccchhhHHHHHHHHHhcCCCccEEEEEecCCCccccccCCCchHHHHHHHHHHHHHH
Q 039671 129 VLIFVAEKDFLKPVAMNYYEDLKKSGWKGTVELVETHGEGHSFYFDNLKCEKAVELINKFVSFIT 193 (195)
Q Consensus 129 ~~i~~g~~D~l~~~~~~~~~~l~~~~~g~~~~~~~~~g~~H~f~~~~~~~~~~~~~~~~~~~fl~ 193 (195)
++++||-.....-.-..++..|... |-.|--..++|.++ -+-.....+.....++++..|+.
T Consensus 57 v~~~HG~g~~~s~~~~~~a~~l~~~--g~~v~a~D~~GhG~-SdGl~~yi~~~d~~v~D~~~~~~ 118 (313)
T KOG1455|consen 57 VFLCHGYGEHSSWRYQSTAKRLAKS--GFAVYAIDYEGHGR-SDGLHAYVPSFDLVVDDVISFFD 118 (313)
T ss_pred EEEEcCCcccchhhHHHHHHHHHhC--CCeEEEeeccCCCc-CCCCcccCCcHHHHHHHHHHHHH
Confidence 7888886654433445577888888 56666666666444 22223345566777788877775
No 290
>KOG2214 consensus Predicted esterase of the alpha-beta hydrolase superfamily [General function prediction only]
Probab=43.28 E-value=10 Score=31.93 Aligned_cols=25 Identities=24% Similarity=0.312 Sum_probs=19.8
Q ss_pred CCceEEeeccchHHHHHHHHHHhcc
Q 039671 46 FGRVFIGGGSAGGNIAHTLAFQVGS 70 (195)
Q Consensus 46 ~~~i~l~G~S~Gg~la~~~a~~~~~ 70 (195)
.=.=+|.|.|+||.+|..++.+...
T Consensus 201 LlP~IIsGsS~GaivAsl~~v~~~e 225 (543)
T KOG2214|consen 201 LLPNIISGSSAGAIVASLVGVRSNE 225 (543)
T ss_pred ccchhhcCCchhHHHHHHHhhcchH
Confidence 3346799999999999988877653
No 291
>PF14253 AbiH: Bacteriophage abortive infection AbiH
Probab=43.01 E-value=15 Score=28.12 Aligned_cols=19 Identities=26% Similarity=0.249 Sum_probs=14.8
Q ss_pred CCCCceEEeeccchHHHHH
Q 039671 44 ADFGRVFIGGGSAGGNIAH 62 (195)
Q Consensus 44 ~d~~~i~l~G~S~Gg~la~ 62 (195)
-+...|+|+|||.|..=.-
T Consensus 232 ~~i~~I~i~GhSl~~~D~~ 250 (270)
T PF14253_consen 232 SDIDEIIIYGHSLGEVDYP 250 (270)
T ss_pred cCCCEEEEEeCCCchhhHH
Confidence 4668999999999975333
No 292
>cd07217 Pat17_PNPLA8_PNPLA9_like4 Patatin-like phospholipase. Patatin is a storage protein of the potato tuber that shows Phospholipase A2 activity (PLA2; EC 3.1.1.4). Patatin catalyzes the nonspecific hydrolysis of phospholipids, glycolipids, sulfolipids, and mono- and diacylglycerols, thereby showing lipid acyl hydrolase activity. The active site includes an oxyanion hole with a conserved GGxR motif; it is found in almost all the members of this family. The catalytic dyad is formed by a serine and an aspartate. Patatin belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue and Nu = nucleophile). Members of this family have been found also in vertebrates. This family includes subfamily of PNPLA8 (iPLA2-gamma) and PNPLA9 (iPLA2-beta) like phospholipases from human as well as the Pat17 isozyme from Solanum cardiophyllum.
Probab=42.74 E-value=18 Score=29.06 Aligned_cols=17 Identities=47% Similarity=0.813 Sum_probs=15.5
Q ss_pred EEeeccchHHHHHHHHH
Q 039671 50 FIGGGSAGGNIAHTLAF 66 (195)
Q Consensus 50 ~l~G~S~Gg~la~~~a~ 66 (195)
.|+|-|.||.+|+.++.
T Consensus 44 lIaGTStGgIIAa~la~ 60 (344)
T cd07217 44 FVGGTSTGSIIAACIAL 60 (344)
T ss_pred EEEEecHHHHHHHHHHc
Confidence 69999999999998885
No 293
>PRK15219 carbonic anhydrase; Provisional
Probab=42.63 E-value=39 Score=25.84 Aligned_cols=33 Identities=18% Similarity=0.311 Sum_probs=26.1
Q ss_pred HHHHHHHHHHHHhccCCCCCCCCCCCCCCCceEEeeccchHHHHHH
Q 039671 18 EDSWAALNWVASHAGGNGPEPWLNDHADFGRVFIGGGSAGGNIAHT 63 (195)
Q Consensus 18 ~D~~~a~~~l~~~~~~~~~~~~~~~~~d~~~i~l~G~S~Gg~la~~ 63 (195)
.|+..+++|.... .+.+.|+|+|||-=|.+...
T Consensus 127 ~~~~~slEyAv~~-------------L~v~~IvVlGHt~CGav~Aa 159 (245)
T PRK15219 127 DDLLGSMEFACAV-------------AGAKVVLVMGHTACGAVKGA 159 (245)
T ss_pred cchhhHHHHHHHH-------------cCCCEEEEecCCcchHHHHH
Confidence 3677899999988 67789999999986655443
No 294
>PLN00416 carbonate dehydratase
Probab=42.55 E-value=38 Score=26.13 Aligned_cols=33 Identities=21% Similarity=0.316 Sum_probs=26.4
Q ss_pred HHHHHHHHHHHhccCCCCCCCCCCCCCCCceEEeeccchHHHHHHH
Q 039671 19 DSWAALNWVASHAGGNGPEPWLNDHADFGRVFIGGGSAGGNIAHTL 64 (195)
Q Consensus 19 D~~~a~~~l~~~~~~~~~~~~~~~~~d~~~i~l~G~S~Gg~la~~~ 64 (195)
++.++++|.... .....|+|+|||-=|.+.+.+
T Consensus 125 ~~~asLEyAv~~-------------L~V~~IVV~GHs~CGaV~Aa~ 157 (258)
T PLN00416 125 GVGAAVEYAVVH-------------LKVENILVIGHSCCGGIKGLM 157 (258)
T ss_pred cchhHHHHHHHH-------------hCCCEEEEecCCCchHHHHHH
Confidence 467889999988 567899999999877665544
No 295
>KOG4287 consensus Pectin acetylesterase and similar proteins [Cell wall/membrane/envelope biogenesis]
Probab=42.33 E-value=11 Score=30.27 Aligned_cols=19 Identities=26% Similarity=0.426 Sum_probs=15.1
Q ss_pred CCCCceEEeeccchHHHHH
Q 039671 44 ADFGRVFIGGGSAGGNIAH 62 (195)
Q Consensus 44 ~d~~~i~l~G~S~Gg~la~ 62 (195)
.+.++..|.|.|+||.-++
T Consensus 173 s~Ak~alLsGcSAGGLa~i 191 (402)
T KOG4287|consen 173 SNAKQALLSGCSAGGLASI 191 (402)
T ss_pred hHHHHHHhhcCCccchhhe
Confidence 4567889999999996554
No 296
>cd07229 Pat_TGL3_like Triacylglycerol lipase 3. Triacylglycerol lipase 3 (TGL3) are responsible for all the TAG lipase activity of the lipid particle. Triacylglycerol (TAG) lipases are also necessary for the mobilization of TAG stored in lipid particles. TGL3 contains the consensus sequence motif GXSXG, which is found in lipolytic enzymes. This family includes Tgl3p from Saccharomyces cerevisiae.
Probab=41.45 E-value=35 Score=28.05 Aligned_cols=19 Identities=26% Similarity=0.406 Sum_probs=16.5
Q ss_pred EEeeccchHHHHHHHHHHh
Q 039671 50 FIGGGSAGGNIAHTLAFQV 68 (195)
Q Consensus 50 ~l~G~S~Gg~la~~~a~~~ 68 (195)
+|.|.|+|+.+|+.++...
T Consensus 114 ~i~GtS~Gaivaa~~a~~~ 132 (391)
T cd07229 114 IITGTATGALIAALVGVHT 132 (391)
T ss_pred eEEEecHHHHHHHHHHcCC
Confidence 4999999999999888853
No 297
>PRK03592 haloalkane dehalogenase; Provisional
Probab=41.08 E-value=1.4e+02 Score=22.78 Aligned_cols=62 Identities=5% Similarity=-0.132 Sum_probs=34.7
Q ss_pred CCEEEEEcCCccchhhHHHHHHHHHhcCCCccEEEEEecCCCccccccCCCchHHHHHHHHHHHHHHh
Q 039671 127 ERVLIFVAEKDFLKPVAMNYYEDLKKSGWKGTVELVETHGEGHSFYFDNLKCEKAVELINKFVSFITQ 194 (195)
Q Consensus 127 pp~~i~~g~~D~l~~~~~~~~~~l~~~~~g~~~~~~~~~g~~H~f~~~~~~~~~~~~~~~~~~~fl~~ 194 (195)
||++++||.-..... -..+...|.+. + +++.+.-.+|+........-......+++.++++.
T Consensus 28 ~~vvllHG~~~~~~~-w~~~~~~L~~~--~---~via~D~~G~G~S~~~~~~~~~~~~a~dl~~ll~~ 89 (295)
T PRK03592 28 DPIVFLHGNPTSSYL-WRNIIPHLAGL--G---RCLAPDLIGMGASDKPDIDYTFADHARYLDAWFDA 89 (295)
T ss_pred CEEEEECCCCCCHHH-HHHHHHHHhhC--C---EEEEEcCCCCCCCCCCCCCCCHHHHHHHHHHHHHH
Confidence 589999996543222 23455666666 3 66666666677654322111235555666666653
No 298
>PLN02154 carbonic anhydrase
Probab=40.14 E-value=48 Score=26.03 Aligned_cols=33 Identities=21% Similarity=0.367 Sum_probs=26.0
Q ss_pred HHHHHHHHHHHhccCCCCCCCCCCCCCCCceEEeeccchHHHHHHH
Q 039671 19 DSWAALNWVASHAGGNGPEPWLNDHADFGRVFIGGGSAGGNIAHTL 64 (195)
Q Consensus 19 D~~~a~~~l~~~~~~~~~~~~~~~~~d~~~i~l~G~S~Gg~la~~~ 64 (195)
.+.++++|.... ...+.|+|+|||-=|.+.+.+
T Consensus 151 ~~~aslEyAv~~-------------L~v~~IvV~GHs~CGAV~Aal 183 (290)
T PLN02154 151 ETNSALEFAVTT-------------LQVENIIVMGHSNCGGIAALM 183 (290)
T ss_pred chhhHHHHHHHH-------------hCCCEEEEecCCCchHHHHHH
Confidence 467889999888 667899999999866655544
No 299
>cd01819 Patatin_and_cPLA2 Patatins and Phospholipases. Patatin-like phospholipase. This family consists of various patatin glycoproteins from plants. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have also been found in vertebrates. This family also includes the catalytic domain of cytosolic phospholipase A2 (PLA2; EC 3.1.1.4) hydrolyzes the sn-2-acyl ester bond of phospholipids to release arachidonic acid. At the active site, cPLA2 contains a serine nucleophile through which the catalytic mechanism is initiated. The active site is partially covered by a solvent-accessible flexible lid. cPLA2 displays interfacial activation as it exists in both "closed lid" and "open lid" forms.
Probab=40.11 E-value=46 Score=23.18 Aligned_cols=19 Identities=32% Similarity=0.442 Sum_probs=15.5
Q ss_pred CceEEeeccchHHHHHHHH
Q 039671 47 GRVFIGGGSAGGNIAHTLA 65 (195)
Q Consensus 47 ~~i~l~G~S~Gg~la~~~a 65 (195)
.--.+.|-|+|+.++..++
T Consensus 28 ~~~~~~G~SaGa~~~~~~~ 46 (155)
T cd01819 28 CVTYLAGTSGGAWVAATLY 46 (155)
T ss_pred CCCEEEEEcHHHHHHHHHh
Confidence 3456899999999888777
No 300
>PLN03014 carbonic anhydrase
Probab=39.98 E-value=38 Score=27.30 Aligned_cols=32 Identities=25% Similarity=0.295 Sum_probs=25.7
Q ss_pred HHHHHHHHHHHhccCCCCCCCCCCCCCCCceEEeeccchHHHHHH
Q 039671 19 DSWAALNWVASHAGGNGPEPWLNDHADFGRVFIGGGSAGGNIAHT 63 (195)
Q Consensus 19 D~~~a~~~l~~~~~~~~~~~~~~~~~d~~~i~l~G~S~Gg~la~~ 63 (195)
++.++++|.... ++.+.|+|+|||-=|.+...
T Consensus 205 ~v~asLEYAV~~-------------L~V~~IVV~GHs~CGaV~Aa 236 (347)
T PLN03014 205 GVGAAIEYAVLH-------------LKVENIVVIGHSACGGIKGL 236 (347)
T ss_pred cchhHHHHHHHH-------------hCCCEEEEeCCCCchHHHHH
Confidence 477899999988 67789999999986655543
No 301
>PF08357 SEFIR: SEFIR domain; InterPro: IPR013568 This domain is found in IL17 receptors (IL17Rs, e.g. Q60943 from SWISSPROT) and SEF proteins (e.g. Q8QHJ9 from SWISSPROT). The latter are feedback inhibitors of FGF signalling and are also thought to be receptors. Due to its similarity to the TIR domain (IPR000157 from INTERPRO), the SEFIR region is thought to be involved in homotypic interactions with other SEFIR/TIR-domain-containing proteins. Thus, SEFs and IL17Rs may be involved in TOLL/IL1R-like signalling pathways [].
Probab=39.90 E-value=40 Score=23.14 Aligned_cols=39 Identities=15% Similarity=-0.007 Sum_probs=29.1
Q ss_pred CCEEEEEcCCccch-hhHHHHHHHHHhcCCCccEEEEEecC
Q 039671 127 ERVLIFVAEKDFLK-PVAMNYYEDLKKSGWKGTVELVETHG 166 (195)
Q Consensus 127 pp~~i~~g~~D~l~-~~~~~~~~~l~~~~~g~~~~~~~~~g 166 (195)
|++||+++.+.... +....|++.|++.+ |.++.+..+..
T Consensus 1 ~kVfI~Ys~d~~~h~~~V~~la~~L~~~~-g~~V~lD~~~~ 40 (150)
T PF08357_consen 1 RKVFISYSHDSEEHKEWVLALAEFLRQNC-GIDVILDQWEL 40 (150)
T ss_pred CeEEEEeCCCCHHHHHHHHHHHHHHHhcc-CCceeecHHhh
Confidence 46899999855443 66999999999994 56777666554
No 302
>PF10432 bact-PGI_C: Bacterial phospho-glucose isomerase C-terminal region; InterPro: IPR019490 Phosphoglucose isomerase (PGI) catalyses the interconversion of phosphoglucose and phosphofructose, and is a component of many sugar metabolic pathways. In some archaea and bacteria PGI activity occurs via a bifunctional enzyme that also exhibits phosphomannose isomerase (PMI) activity. Though not closely related to eukaryotic PGIs, the bifunctional enzyme is similar enough that the sequence includes the cluster of threonines and serines that forms the sugar phosphate-binding site in conventional PGI. This entry represents the C-terminal half of the bifunctional PGI/PMI enzyme, which contains many of the active catalytic site residues. The enzyme is thought to use the same catalytic mechanisms for both glucose ring-opening and isomerisation for the interconversion of glucose 6-phosphate to fructose 6-phosphate [].; GO: 0004347 glucose-6-phosphate isomerase activity, 0004476 mannose-6-phosphate isomerase activity; PDB: 1TZB_A 1X9H_A 1TZC_B 1X9I_A 1WIW_A.
Probab=39.56 E-value=40 Score=23.66 Aligned_cols=41 Identities=15% Similarity=0.192 Sum_probs=30.6
Q ss_pred CEEEEEcCCccchhhHHHHHHHHHhcCCCccEEEEEecCCCcc
Q 039671 128 RVLIFVAEKDFLKPVAMNYYEDLKKSGWKGTVELVETHGEGHS 170 (195)
Q Consensus 128 p~~i~~g~~D~l~~~~~~~~~~l~~~~~g~~~~~~~~~g~~H~ 170 (195)
.+-++.|. +....-+.+|...|.+++ +.+.....+|.+.|.
T Consensus 18 ~~Pvi~~~-~~~~~vA~R~k~qlnEnA-K~~A~~~~lPE~~Hn 58 (155)
T PF10432_consen 18 RIPVIYGS-PLYAAVARRWKQQLNENA-KYPAFAAVLPEANHN 58 (155)
T ss_dssp SEEEEEEC-GCGCHHHHHHHHHHHHTT-----EEEEETCHHHC
T ss_pred CCcEEEEC-ccchHHHHHHHHHHHHHh-CCccchhcchhhhhh
Confidence 35677888 777778999999999886 788999999998883
No 303
>COG0288 CynT Carbonic anhydrase [Inorganic ion transport and metabolism]
Probab=38.92 E-value=39 Score=25.12 Aligned_cols=35 Identities=11% Similarity=0.232 Sum_probs=28.1
Q ss_pred HHHHHHHHHHHHhccCCCCCCCCCCCCCCCceEEeeccchHHHHHHHH
Q 039671 18 EDSWAALNWVASHAGGNGPEPWLNDHADFGRVFIGGGSAGGNIAHTLA 65 (195)
Q Consensus 18 ~D~~~a~~~l~~~~~~~~~~~~~~~~~d~~~i~l~G~S~Gg~la~~~a 65 (195)
.++..+++|.... ++.+.|+|+||+-=|.+.+.+.
T Consensus 76 ~~~l~sleyAv~~-------------L~v~~IiV~GH~~CGav~aa~~ 110 (207)
T COG0288 76 GSVLRSLEYAVYV-------------LGVKEIIVCGHTDCGAVKAALD 110 (207)
T ss_pred cchhHHHHHHHHH-------------cCCCEEEEecCCCcHHHHhccc
Confidence 6888999999988 6788999999998776554443
No 304
>PRK10437 carbonic anhydrase; Provisional
Probab=38.56 E-value=57 Score=24.51 Aligned_cols=33 Identities=9% Similarity=0.294 Sum_probs=26.2
Q ss_pred HHHHHHHHHHHhccCCCCCCCCCCCCCCCceEEeeccchHHHHHHH
Q 039671 19 DSWAALNWVASHAGGNGPEPWLNDHADFGRVFIGGGSAGGNIAHTL 64 (195)
Q Consensus 19 D~~~a~~~l~~~~~~~~~~~~~~~~~d~~~i~l~G~S~Gg~la~~~ 64 (195)
++..+++|.... ...+.|+|+|||-=|.+.+.+
T Consensus 76 ~~~~~leyAV~~-------------L~v~~IvV~GHt~CG~V~Aal 108 (220)
T PRK10437 76 NCLSVVQYAVDV-------------LEVEHIIICGHYGCGGVQAAV 108 (220)
T ss_pred chHHHHHHHHHH-------------cCCCEEEEeCCCCchHHHHHH
Confidence 578889998887 667899999999877655544
No 305
>PF00484 Pro_CA: Carbonic anhydrase; InterPro: IPR001765 Carbonic anhydrases (4.2.1.1 from EC) (CA) are zinc metalloenzymes which catalyze the reversible hydration of carbon dioxide. In Escherichia coli, CA (gene cynT) is involved in recycling carbon dioxide formed in the bicarbonate-dependent decomposition of cyanate by cyanase (gene cynS). By this action, it prevents the depletion of cellular bicarbonate []. In photosynthetic bacteria and plant chloroplast, CA is essential to inorganic carbon fixation []. Prokaryotic and plant chloroplast CA are structurally and evolutionary related and form a family distinct from the one which groups the many different forms of eukaryotic CA's (see IPR001148 from INTERPRO). Hypothetical proteins yadF from Escherichia coli and HI1301 from Haemophilus influenzae also belong to this family. This family also includes, YbcF and related proteins, which are inactive homologues of bacterial carbonic anhydrase.; GO: 0004089 carbonate dehydratase activity, 0008270 zinc ion binding; PDB: 1DDZ_B 3LAS_A 2W3N_A 2W3Q_A 1G5C_F 3E2A_A 3E2X_B 2A8C_A 2A8D_D 3E3F_A ....
Probab=38.17 E-value=82 Score=21.73 Aligned_cols=33 Identities=18% Similarity=0.351 Sum_probs=24.8
Q ss_pred HHHHHHHHHHHHHhccCCCCCCCCCCCCCCCceEEeeccchHHHHH
Q 039671 17 YEDSWAALNWVASHAGGNGPEPWLNDHADFGRVFIGGGSAGGNIAH 62 (195)
Q Consensus 17 ~~D~~~a~~~l~~~~~~~~~~~~~~~~~d~~~i~l~G~S~Gg~la~ 62 (195)
-.++.++++|.... ...+.|+|+|||-=|.+..
T Consensus 38 ~~~~~~sle~av~~-------------l~v~~IiV~gHt~CGa~~~ 70 (153)
T PF00484_consen 38 DDSALASLEYAVYH-------------LGVKEIIVCGHTDCGAIKA 70 (153)
T ss_dssp -HHHHHHHHHHHHT-------------ST-SEEEEEEETT-HHHHH
T ss_pred ccchhhheeeeeec-------------CCCCEEEEEcCCCchHHHH
Confidence 47788899998887 6678999999998776553
No 306
>cd07232 Pat_PLPL Patain-like phospholipase. Patatin-like phospholipase. This family consists of various patatin glycoproteins from plants and fungi. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have been found also in vertebrates.
Probab=38.12 E-value=23 Score=29.29 Aligned_cols=19 Identities=32% Similarity=0.420 Sum_probs=16.4
Q ss_pred EEeeccchHHHHHHHHHHh
Q 039671 50 FIGGGSAGGNIAHTLAFQV 68 (195)
Q Consensus 50 ~l~G~S~Gg~la~~~a~~~ 68 (195)
+|+|-|+|+.+|+.++...
T Consensus 98 iI~GtSAGAivaalla~~t 116 (407)
T cd07232 98 VISGTSGGSLVAALLCTRT 116 (407)
T ss_pred EEEEECHHHHHHHHHHcCC
Confidence 5999999999999888753
No 307
>cd07227 Pat_Fungal_NTE1 Fungal patatin-like phospholipase domain containing protein 6. These are fungal Neuropathy Target Esterase (NTE), commonly referred to as NTE1. Patatin-like phospholipase. NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. This family includes NTE1 from fungi.
Probab=38.08 E-value=25 Score=27.27 Aligned_cols=19 Identities=32% Similarity=0.317 Sum_probs=15.9
Q ss_pred eEEeeccchHHHHHHHHHH
Q 039671 49 VFIGGGSAGGNIAHTLAFQ 67 (195)
Q Consensus 49 i~l~G~S~Gg~la~~~a~~ 67 (195)
=.|.|-|+|+.++..++..
T Consensus 40 d~v~GtSaGAiiga~ya~g 58 (269)
T cd07227 40 DAIGGTSIGSFVGGLYARE 58 (269)
T ss_pred cEEEEECHHHHHHHHHHcC
Confidence 3589999999999887765
No 308
>cd07219 Pat_PNPLA1 Patatin-like phospholipase domain containing protein 1. Members of this family share a patatin domain, initially discovered in potato tubers. Some members of PNPLA1 subfamily do not have the lipase consensus sequence Gly-X-Ser-X-Gly which is essential for hydrolase activity. This family includes PNPLA1 from Homo sapiens and Gallus gallus. Currently, there is no literature available on the physiological role, structure, or enzymatic activity of PNPLA1. It is expressed in various human tissues in low mRNA levels.
Probab=37.76 E-value=46 Score=27.26 Aligned_cols=19 Identities=32% Similarity=0.312 Sum_probs=15.6
Q ss_pred eEEeeccchHHHHHHHHHH
Q 039671 49 VFIGGGSAGGNIAHTLAFQ 67 (195)
Q Consensus 49 i~l~G~S~Gg~la~~~a~~ 67 (195)
-.|+|-|+|+..|+.++..
T Consensus 46 d~IaGtSAGALvAAl~asG 64 (382)
T cd07219 46 HRVAGTSAGSVIAALVVCG 64 (382)
T ss_pred CeEEEEcHHHHHHHHHHhC
Confidence 3499999999998877755
No 309
>cd01826 acyloxyacyl_hydrolase_like Acyloxyacyl-hydrolase like subfamily of the SGNH-hydrolase family. Acyloxyacyl-hydrolase is a leukocyte-secreted enzyme that deacetylates bacterial lipopolysaccharides.
Probab=37.74 E-value=19 Score=28.47 Aligned_cols=19 Identities=26% Similarity=0.249 Sum_probs=15.1
Q ss_pred CCCCceEEeeccchHHHHH
Q 039671 44 ADFGRVFIGGGSAGGNIAH 62 (195)
Q Consensus 44 ~d~~~i~l~G~S~Gg~la~ 62 (195)
..+.-|+++|+|+|++.-+
T Consensus 9 s~~~g~i~~gds~~ahf~i 27 (305)
T cd01826 9 SQPMGVILLGDSAGAHFHI 27 (305)
T ss_pred CCCceEEEecccccccccC
Confidence 4566799999999997543
No 310
>PF14714 KH_dom-like: KH-domain-like of EngA bacterial GTPase enzymes, C-terminal; PDB: 2HJG_A 1MKY_A.
Probab=37.22 E-value=1e+02 Score=18.98 Aligned_cols=36 Identities=11% Similarity=0.170 Sum_probs=17.7
Q ss_pred CCCEEEEEcCCccchhh--HHHHHHHHHhc---CCCccEEEE
Q 039671 126 CERVLIFVAEKDFLKPV--AMNYYEDLKKS---GWKGTVELV 162 (195)
Q Consensus 126 ~pp~~i~~g~~D~l~~~--~~~~~~~l~~~---~~g~~~~~~ 162 (195)
-||++++.+.+...++. ..-+...|++. . |.++++.
T Consensus 38 ~PPtFv~f~N~~~~~~~sY~ryL~n~lRe~f~f~-G~Pi~l~ 78 (80)
T PF14714_consen 38 RPPTFVLFVNDPELLPESYKRYLENQLREAFGFE-GVPIRLI 78 (80)
T ss_dssp TTTEEEEEES-CCC--HHHHHHHHHHHHHHH--T-TS--EEE
T ss_pred CCCEEEEEeCCcccCCHHHHHHHHHHHHHHCCCC-ceeEEEE
Confidence 47999999998655533 33333344443 1 4566554
No 311
>PLN03019 carbonic anhydrase
Probab=36.77 E-value=43 Score=26.82 Aligned_cols=33 Identities=24% Similarity=0.315 Sum_probs=26.0
Q ss_pred HHHHHHHHHHHhccCCCCCCCCCCCCCCCceEEeeccchHHHHHHH
Q 039671 19 DSWAALNWVASHAGGNGPEPWLNDHADFGRVFIGGGSAGGNIAHTL 64 (195)
Q Consensus 19 D~~~a~~~l~~~~~~~~~~~~~~~~~d~~~i~l~G~S~Gg~la~~~ 64 (195)
.+.++++|.... +....|+|+|||-=|.+.+.+
T Consensus 200 ~v~aSIEYAV~~-------------L~V~~IVV~GHs~CGaVkAal 232 (330)
T PLN03019 200 GVGAAIEYAVLH-------------LKVENIVVIGHSACGGIKGLM 232 (330)
T ss_pred ccchhHHHHHHH-------------hCCCEEEEecCCCchHHHHHH
Confidence 466899999988 567899999999877655443
No 312
>cd07215 Pat17_PNPLA8_PNPLA9_like2 Patatin-like phospholipase of bacteria. Patatin is a storage protein of the potato tuber that shows Phospholipase A2 activity (PLA2; EC 3.1.1.4). Patatin catalyzes the nonspecific hydrolysis of phospholipids, glycolipids, sulfolipids, and mono- and diacylglycerols, thereby showing lipid acyl hydrolase activity. The active site includes an oxyanion hole with a conserved GGxR motif; it is found in almost all the members of this family. The catalytic dyad is formed by a serine and an aspartate. Patatin belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue and Nu = nucleophile). Members of this family have been found also in vertebrates. This family includes subfamily of PNPLA8 (iPLA2-gamma) and PNPLA9 (iPLA2-beta) like phospholipases from human as well as the Pat17 isozyme from Solanum cardiophyllum.
Probab=36.25 E-value=25 Score=27.97 Aligned_cols=16 Identities=25% Similarity=0.499 Sum_probs=14.1
Q ss_pred EEeeccchHHHHHHHH
Q 039671 50 FIGGGSAGGNIAHTLA 65 (195)
Q Consensus 50 ~l~G~S~Gg~la~~~a 65 (195)
.|+|-|.||.+|+.++
T Consensus 43 li~GTStGgiia~~l~ 58 (329)
T cd07215 43 LVAGTSTGGILTCLYL 58 (329)
T ss_pred eeeccCHHHHHHHHHh
Confidence 6999999999998765
No 313
>TIGR03100 hydr1_PEP hydrolase, ortholog 1, exosortase system type 1 associated. This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 2, TIGR03101) of the same superfamily.
Probab=35.88 E-value=2e+02 Score=21.99 Aligned_cols=41 Identities=17% Similarity=0.058 Sum_probs=26.3
Q ss_pred CCEEEEEcCCccchh---hHHHHHHHHHhcCCCccEEEEEecCCCccc
Q 039671 127 ERVLIFVAEKDFLKP---VAMNYYEDLKKSGWKGTVELVETHGEGHSF 171 (195)
Q Consensus 127 pp~~i~~g~~D~l~~---~~~~~~~~l~~~~~g~~~~~~~~~g~~H~f 171 (195)
++++++||+.+.... ....+++.|.+. |..+-...++| |+-
T Consensus 27 ~~vv~i~gg~~~~~g~~~~~~~la~~l~~~--G~~v~~~Dl~G--~G~ 70 (274)
T TIGR03100 27 TGVLIVVGGPQYRVGSHRQFVLLARRLAEA--GFPVLRFDYRG--MGD 70 (274)
T ss_pred CeEEEEeCCccccCCchhHHHHHHHHHHHC--CCEEEEeCCCC--CCC
Confidence 478889988875442 245667888888 55555555555 554
No 314
>PRK13938 phosphoheptose isomerase; Provisional
Probab=35.37 E-value=79 Score=23.22 Aligned_cols=25 Identities=24% Similarity=0.310 Sum_probs=21.8
Q ss_pred CCCceEEeeccchHHHHHHHHHHhc
Q 039671 45 DFGRVFIGGGSAGGNIAHTLAFQVG 69 (195)
Q Consensus 45 d~~~i~l~G~S~Gg~la~~~a~~~~ 69 (195)
...||+++|....|.+|..++.+..
T Consensus 44 ~g~rI~i~G~G~S~~~A~~fa~~L~ 68 (196)
T PRK13938 44 AGARVFMCGNGGSAADAQHFAAELT 68 (196)
T ss_pred CCCEEEEEeCcHHHHHHHHHHHHcC
Confidence 3479999999999999999998874
No 315
>PRK13936 phosphoheptose isomerase; Provisional
Probab=35.27 E-value=96 Score=22.64 Aligned_cols=26 Identities=12% Similarity=0.215 Sum_probs=20.9
Q ss_pred CCCCceEEeeccchHHHHHHHHHHhc
Q 039671 44 ADFGRVFIGGGSAGGNIAHTLAFQVG 69 (195)
Q Consensus 44 ~d~~~i~l~G~S~Gg~la~~~a~~~~ 69 (195)
.+..+|+++|....+.+|..++.+..
T Consensus 41 ~~a~~I~i~G~G~S~~~A~~~~~~l~ 66 (197)
T PRK13936 41 LNEGKILACGNGGSAADAQHFSAELL 66 (197)
T ss_pred HCCCEEEEEeCcHhHHHHHHHHHHcc
Confidence 35679999999988888888887653
No 316
>PRK00414 gmhA phosphoheptose isomerase; Reviewed
Probab=35.05 E-value=90 Score=22.72 Aligned_cols=42 Identities=17% Similarity=0.037 Sum_probs=31.4
Q ss_pred hHHHHHHHHHHHHHhccCCCCCCCCCCCCCCCceEEeeccchHHHHHHHHHHhc
Q 039671 16 CYEDSWAALNWVASHAGGNGPEPWLNDHADFGRVFIGGGSAGGNIAHTLAFQVG 69 (195)
Q Consensus 16 ~~~D~~~a~~~l~~~~~~~~~~~~~~~~~d~~~i~l~G~S~Gg~la~~~a~~~~ 69 (195)
..+.+..+++++.+.. ....+|+++|....+.+|..++....
T Consensus 26 ~~~~i~~a~~~i~~al------------~~~~rI~i~G~G~S~~~A~~~a~~l~ 67 (192)
T PRK00414 26 NIHAIQRAAVLIADSF------------KAGGKVLSCGNGGSHCDAMHFAEELT 67 (192)
T ss_pred hHHHHHHHHHHHHHHH------------HCCCEEEEEeCcHHHHHHHHHHHHhc
Confidence 4466777777777764 24579999999998998888885543
No 317
>COG2845 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=34.42 E-value=1.6e+02 Score=23.66 Aligned_cols=26 Identities=23% Similarity=0.263 Sum_probs=20.9
Q ss_pred CCCCceEEeeccchHHHHHHHHHHhc
Q 039671 44 ADFGRVFIGGGSAGGNIAHTLAFQVG 69 (195)
Q Consensus 44 ~d~~~i~l~G~S~Gg~la~~~a~~~~ 69 (195)
-|.++|.++|+|.++++|-.+-....
T Consensus 114 ~~a~kvLvvGDslm~gla~gl~~al~ 139 (354)
T COG2845 114 RDADKVLVVGDSLMQGLAEGLDKALA 139 (354)
T ss_pred CCCCEEEEechHHhhhhHHHHHHHhc
Confidence 46789999999999999886655543
No 318
>PLN02385 hydrolase; alpha/beta fold family protein
Probab=34.16 E-value=1.8e+02 Score=23.05 Aligned_cols=62 Identities=10% Similarity=-0.062 Sum_probs=32.2
Q ss_pred CCEEEEEcCCccchhhHHHHHHHHHhcCCCccEEEEEecCCCccccccC-CCchHHHHHHHHHHHHH
Q 039671 127 ERVLIFVAEKDFLKPVAMNYYEDLKKSGWKGTVELVETHGEGHSFYFDN-LKCEKAVELINKFVSFI 192 (195)
Q Consensus 127 pp~~i~~g~~D~l~~~~~~~~~~l~~~~~g~~~~~~~~~g~~H~f~~~~-~~~~~~~~~~~~~~~fl 192 (195)
|+++++||-.......-..+++.|.+. |-.+-...++| ||..... ..........+++.+++
T Consensus 88 ~~iv~lHG~~~~~~~~~~~~~~~l~~~--g~~v~~~D~~G--~G~S~~~~~~~~~~~~~~~dv~~~l 150 (349)
T PLN02385 88 AAVCFCHGYGDTCTFFFEGIARKIASS--GYGVFAMDYPG--FGLSEGLHGYIPSFDDLVDDVIEHY 150 (349)
T ss_pred eEEEEECCCCCccchHHHHHHHHHHhC--CCEEEEecCCC--CCCCCCCCCCcCCHHHHHHHHHHHH
Confidence 469999997654222224566677777 44444444554 6644321 11122344555555554
No 319
>cd03379 beta_CA_cladeD Carbonic anhydrases (CA) are zinc-containing enzymes that catalyze the reversible hydration of carbon dioxide in a two-step mechanism in which the nucleophilic attack of a zinc-bound hydroxide ion on carbon dioxide is followed by the regeneration of an active site by ionization of the zinc-bound water molecule and removal of a proton from the active site. CAs are ubiquitous enzymes involved in fundamental processes like photosynthesis, respiration, pH homeostasis and ion transport. There are three evolutionarily distinct families of CAs (the alpha-, beta-, and gamma-CAs) which show no significant sequence identity or structural similarity. Within the beta-CA family there are four evolutionarily distinct clades (A through D). The beta-CAs are multimeric enzymes (forming dimers,tetramers,hexamers and octamers) which are present in higher plants, algae, fungi, archaea and prokaryotes.
Probab=33.76 E-value=54 Score=22.57 Aligned_cols=28 Identities=11% Similarity=-0.014 Sum_probs=21.7
Q ss_pred HHHHHHHHHHHhccCCCCCCCCCCCCCCCceEEeeccchHH
Q 039671 19 DSWAALNWVASHAGGNGPEPWLNDHADFGRVFIGGGSAGGN 59 (195)
Q Consensus 19 D~~~a~~~l~~~~~~~~~~~~~~~~~d~~~i~l~G~S~Gg~ 59 (195)
|+..++.|.... ...+.|+|+||+-=|.
T Consensus 41 ~~~~sl~~av~~-------------l~~~~IiV~gHt~Cg~ 68 (142)
T cd03379 41 DAIRSLVVSVYL-------------LGTREIIVIHHTDCGM 68 (142)
T ss_pred hHHHHHHHHHHH-------------hCCCEEEEEeecCCcc
Confidence 677888888877 5678999999985443
No 320
>COG1752 RssA Predicted esterase of the alpha-beta hydrolase superfamily [General function prediction only]
Probab=33.33 E-value=34 Score=26.90 Aligned_cols=21 Identities=33% Similarity=0.233 Sum_probs=17.4
Q ss_pred CceEEeeccchHHHHHHHHHH
Q 039671 47 GRVFIGGGSAGGNIAHTLAFQ 67 (195)
Q Consensus 47 ~~i~l~G~S~Gg~la~~~a~~ 67 (195)
.--+|.|.|+|+.++..+|..
T Consensus 39 ~~~~iaGtS~GAiva~l~A~g 59 (306)
T COG1752 39 PIDVIAGTSAGAIVAALYAAG 59 (306)
T ss_pred CccEEEecCHHHHHHHHHHcC
Confidence 446799999999999988765
No 321
>KOG0256 consensus 1-aminocyclopropane-1-carboxylate synthase, and related proteins [Signal transduction mechanisms]
Probab=32.85 E-value=3e+02 Score=23.11 Aligned_cols=48 Identities=13% Similarity=0.117 Sum_probs=34.5
Q ss_pred CCCchHHHHHHHHHHHHHhccCCCCCCCCCCCCCCCceEEeeccchHHHHHHHHHHhc
Q 039671 12 PIPACYEDSWAALNWVASHAGGNGPEPWLNDHADFGRVFIGGGSAGGNIAHTLAFQVG 69 (195)
Q Consensus 12 ~~p~~~~D~~~a~~~l~~~~~~~~~~~~~~~~~d~~~i~l~G~S~Gg~la~~~a~~~~ 69 (195)
..|.-=+-++.++.+.+.+..+ .||+|+++.+.+.+++-++..+...+
T Consensus 122 Gl~~frqa~A~Fm~~~r~~~v~----------fdP~~~Vv~~G~T~ane~l~fcLadp 169 (471)
T KOG0256|consen 122 GLPSFRQAVAEFMERARGNRVK----------FDPERVVVTNGATSANETLMFCLADP 169 (471)
T ss_pred CchHHHHHHHHHHHHHhCCCCc----------cCccceEEecccchhhHHHHHHhcCC
Confidence 3444455566666666655443 68999999999999998887777753
No 322
>PRK05441 murQ N-acetylmuramic acid-6-phosphate etherase; Reviewed
Probab=32.81 E-value=1.4e+02 Score=23.59 Aligned_cols=55 Identities=24% Similarity=0.278 Sum_probs=32.4
Q ss_pred HHHHHHHHHHHHHhccCCCCCCCCCCCCCCCceEEeeccchHHHHHHHHHH-hccCCCCCCceeEEEe
Q 039671 17 YEDSWAALNWVASHAGGNGPEPWLNDHADFGRVFIGGGSAGGNIAHTLAFQ-VGSIGLPRVKLVGVIM 83 (195)
Q Consensus 17 ~~D~~~a~~~l~~~~~~~~~~~~~~~~~d~~~i~l~G~S~Gg~la~~~a~~-~~~~~~~~~~~~~~i~ 83 (195)
++.+..+++.+.+.. ....||+++|....|.++..-+.. .+.-+.++..+.+++.
T Consensus 45 l~~I~~av~~~~~~l------------~~ggrI~~~GaGtSg~la~~da~e~~~tfg~~~~~v~~iia 100 (299)
T PRK05441 45 LPQIAAAVDAAAAAL------------RQGGRLIYIGAGTSGRLGVLDASECPPTFGVPPELVVGLIA 100 (299)
T ss_pred HHHHHHHHHHHHHHH------------HCCCEEEEEcCcHHHHHHHHHHHhCcCccCCCchhceeeec
Confidence 344555555555543 245689999999989888544443 3333333345556554
No 323
>PRK15001 SAM-dependent 23S ribosomal RNA mG1835 methyltransferase; Provisional
Probab=32.69 E-value=56 Score=26.75 Aligned_cols=47 Identities=19% Similarity=0.126 Sum_probs=28.8
Q ss_pred CCCCCCchHHHHHHHHHHHHHhccCCCCCCCCCCCCCCCceEEeeccchHHHHHHHH
Q 039671 9 PDRPIPACYEDSWAALNWVASHAGGNGPEPWLNDHADFGRVFIGGGSAGGNIAHTLA 65 (195)
Q Consensus 9 p~~~~p~~~~D~~~a~~~l~~~~~~~~~~~~~~~~~d~~~i~l~G~S~Gg~la~~~a 65 (195)
|+..-++.++=..+|=+||.++..... .+ .+|.|+++|.|+. ++.++
T Consensus 17 p~~~~~~~l~awdaade~ll~~~~~~~--------~~-~~~~i~nd~fGal-~~~l~ 63 (378)
T PRK15001 17 PATDDVNPLQAWEAADEYLLQQLDDTE--------IR-GPVLILNDAFGAL-SCALA 63 (378)
T ss_pred CCCCCcCcccccccHHHHHHHHHhhcc--------cC-CCEEEEcCchhHH-HHHHH
Confidence 544444445545556677887765432 22 2899999999994 44444
No 324
>COG0466 Lon ATP-dependent Lon protease, bacterial type [Posttranslational modification, protein turnover, chaperones]
Probab=32.67 E-value=1.7e+02 Score=26.40 Aligned_cols=50 Identities=32% Similarity=0.296 Sum_probs=35.5
Q ss_pred HHHHHHHHHHHHHhccCCCCCCCC----------CCCCCCCceEEeeccchHHHHHHHHHHhcc
Q 039671 17 YEDSWAALNWVASHAGGNGPEPWL----------NDHADFGRVFIGGGSAGGNIAHTLAFQVGS 70 (195)
Q Consensus 17 ~~D~~~a~~~l~~~~~~~~~~~~~----------~~~~d~~~i~l~G~S~Gg~la~~~a~~~~~ 70 (195)
=|-+..|+.|++.++.++++++.+ .++.-|.. |=|||..||.++..-..+
T Consensus 637 KESa~~A~s~vrs~a~~~~i~~~~fek~dIHiHVPeGAtPKD----GPSAGitm~TAlvS~lt~ 696 (782)
T COG0466 637 KESAQAALSYVRSRAEKLGIDPDFFEKRDIHIHVPEGATPKD----GPSAGITMATALVSLLTG 696 (782)
T ss_pred HHHHHHHHHHHHHHHHHcCCCcccccccceEEECCCCCCCCC----CcchHHHHHHHHHHHHhC
Confidence 355788999999999999865543 22222222 889999999877766654
No 325
>PTZ00472 serine carboxypeptidase (CBP1); Provisional
Probab=32.62 E-value=1.4e+02 Score=25.15 Aligned_cols=24 Identities=25% Similarity=0.455 Sum_probs=19.0
Q ss_pred CEEEEEcCCccchhh--HHHHHHHHH
Q 039671 128 RVLIFVAEKDFLKPV--AMNYYEDLK 151 (195)
Q Consensus 128 p~~i~~g~~D~l~~~--~~~~~~~l~ 151 (195)
+++|.+|..|.++.. .+++.+.|+
T Consensus 366 kVLiYnGd~D~icn~~Gt~~wi~~L~ 391 (462)
T PTZ00472 366 RVMIYAGDMDFICNWIGNKAWTLALQ 391 (462)
T ss_pred eEEEEECCcCeecCcHhHHHHHHhCC
Confidence 699999999988753 667777665
No 326
>TIGR03607 patatin-related protein. This bacterial protein family contains an N-terminal patatin domain, where patatins are plant storage proteins capable of phospholipase activity (see pfam01734). Regions of strong sequence conservation are separated by regions of significant sequence and length variability. Members of the family are distributed sporadically among bacteria. The function is unknown.
Probab=32.24 E-value=33 Score=30.76 Aligned_cols=18 Identities=44% Similarity=0.519 Sum_probs=15.4
Q ss_pred eEEeeccchHHHHHHHHH
Q 039671 49 VFIGGGSAGGNIAHTLAF 66 (195)
Q Consensus 49 i~l~G~S~Gg~la~~~a~ 66 (195)
=+|+|.|+||..+..+|.
T Consensus 68 d~iaGTSAGAInaa~lA~ 85 (739)
T TIGR03607 68 DVISGTSAGGINGVLLAY 85 (739)
T ss_pred ceEEeeCHHHHHHHHHHc
Confidence 359999999998888876
No 327
>TIGR00128 fabD malonyl CoA-acyl carrier protein transacylase. The seed alignment for this family of proteins contains a single member each from a number of bacterial species but also an additional pair of closely related, uncharacterized proteins from B. subtilis, one of which has a long C-terminal extension.
Probab=32.08 E-value=69 Score=24.60 Aligned_cols=20 Identities=30% Similarity=0.121 Sum_probs=15.7
Q ss_pred CceEEeeccchHHHHHHHHH
Q 039671 47 GRVFIGGGSAGGNIAHTLAF 66 (195)
Q Consensus 47 ~~i~l~G~S~Gg~la~~~a~ 66 (195)
..-+++|||.|=..|+.++.
T Consensus 83 ~p~~v~GhS~GE~aAa~~aG 102 (290)
T TIGR00128 83 KPDFAAGHSLGEYSALVAAG 102 (290)
T ss_pred CCCEEeecCHHHHHHHHHhC
Confidence 44689999999988777663
No 328
>PRK05629 hypothetical protein; Validated
Probab=31.91 E-value=67 Score=25.36 Aligned_cols=42 Identities=14% Similarity=0.203 Sum_probs=28.7
Q ss_pred CCCCEEEEEcCCccchhhHHH-HHHHHHhcCCCccEEEEEecCC
Q 039671 125 GCERVLIFVAEKDFLKPVAMN-YYEDLKKSGWKGTVELVETHGE 167 (195)
Q Consensus 125 ~~pp~~i~~g~~D~l~~~~~~-~~~~l~~~~~g~~~~~~~~~g~ 167 (195)
.++|+++++|+++.++++... +.+++.+.+ ..+..+..+.+.
T Consensus 4 ~l~~vyL~~G~e~~l~~~~~~~i~~~~~~~~-~~~~n~~~~d~~ 46 (318)
T PRK05629 4 VQPPVHLVLGDDEFLAERARLNIVHDIRSSM-ADSLQVTTLKAS 46 (318)
T ss_pred cCCceEEEEeCHHHHHHHHHHHHHHHHhccC-CCCCceEEeecc
Confidence 346899999999988766544 666666552 235566666654
No 329
>PF03575 Peptidase_S51: Peptidase family S51; InterPro: IPR005320 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S51 (clan PC(S)). The type example being dipeptidase E (alpha-aspartyl dipeptidase) from Escherichia coli. The family contains alpha-aspartyl dipeptidases (dipeptidase E) and cyanophycinases. The three-dimensional structure of Salmonella typhimurium aspartyl dipeptidase, peptidase E has been determine at 1.2-A resolution. The structure of this 25kDa enzyme consists of two mixed beta-sheets forming a V, flanked by six alpha-helices. The active site contains a Ser-His-Glu catalytic triad and is the first example of a serine peptidase/protease with a glutamate in the catalytic triad. The active site Ser is located on a strand-helix motif reminiscent of that found in alpha/beta-hydrolases, but the polypeptide fold and the organisation of the catalytic triad differ from those of the known serine proteases. This enzyme appears to represent a new example of convergent evolution of peptidase activity []. Alpha-aspartyl dipeptidase hydrolyses dipeptides containing N-terminal aspartate residues, asp-|-xaa. It does not act on peptides with N-terminal Glu, Asn or Gln, nor does it cleave isoaspartyl peptides. In the cyanobacteria, cyanophycinase is an exopeptidase that catalyses the hydrolytic cleavage of multi-l-arginyl-poly-l-aspartic acid (cyanophycin; a water- insoluble reserve polymer) into aspartate-arginine dipeptides.; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 3EN0_B 1FYE_A 1FY2_A 3L4E_A.
Probab=31.48 E-value=18 Score=25.26 Aligned_cols=12 Identities=50% Similarity=0.426 Sum_probs=10.6
Q ss_pred eEEeeccchHHH
Q 039671 49 VFIGGGSAGGNI 60 (195)
Q Consensus 49 i~l~G~S~Gg~l 60 (195)
..++|.|||+.+
T Consensus 70 ~vi~G~SAGA~i 81 (154)
T PF03575_consen 70 GVIIGTSAGAMI 81 (154)
T ss_dssp SEEEEETHHHHC
T ss_pred CEEEEEChHHhh
Confidence 789999999965
No 330
>PF14258 DUF4350: Domain of unknown function (DUF4350)
Probab=31.31 E-value=56 Score=19.12 Aligned_cols=50 Identities=10% Similarity=0.114 Sum_probs=28.1
Q ss_pred HHHHHHHHHhcCCCccEEEEE-----ecCCCccccccCCCchHHH-HHHHHHHHHHHh
Q 039671 143 AMNYYEDLKKSGWKGTVELVE-----THGEGHSFYFDNLKCEKAV-ELINKFVSFITQ 194 (195)
Q Consensus 143 ~~~~~~~l~~~~~g~~~~~~~-----~~g~~H~f~~~~~~~~~~~-~~~~~~~~fl~~ 194 (195)
...|++.|++. |++++-.. .++.++.+.+..+...... +-.+++.+|+++
T Consensus 7 ~~a~~~~L~~~--g~~v~~~~~~~~~l~~~~~tll~i~~~~~~~~~~~~~~l~~~v~~ 62 (70)
T PF14258_consen 7 TYALYQLLEEQ--GVKVERWRKPYEALEADDGTLLVIGPDLRLSEPEEAEALLEWVEA 62 (70)
T ss_pred HHHHHHHHHHC--CCeeEEecccHHHhCCCCCEEEEEeCCCCCCchHHHHHHHHHHHc
Confidence 56788888888 56665322 2233443444433323332 666788888764
No 331
>cd07206 Pat_TGL3-4-5_SDP1 Triacylglycerol lipase 3, 4, and 5 and Sugar-Dependent 1 lipase. Triacylglycerol lipases are involved in triacylglycerol mobilization and degradation; they are found in lipid particles. TGL4 is 30% homologus to TGL3, whereas TGL5 is 26% homologus to TGL3. Sugar-Dependent 1 (SDP1) lipase has a patatin-like acyl-hydrolase domain that initiates the breakdown of storage oil in germinating Arabidopsis seeds. This family includes subfamilies of proteins: TGL3, TGL4, TGL5, and SDP1.
Probab=31.29 E-value=36 Score=26.86 Aligned_cols=19 Identities=37% Similarity=0.480 Sum_probs=16.2
Q ss_pred EEeeccchHHHHHHHHHHh
Q 039671 50 FIGGGSAGGNIAHTLAFQV 68 (195)
Q Consensus 50 ~l~G~S~Gg~la~~~a~~~ 68 (195)
.+.|-|+|+.+|+.++...
T Consensus 100 ~i~GtSaGAi~aa~~~~~~ 118 (298)
T cd07206 100 VISGSSAGAIVAALLGTHT 118 (298)
T ss_pred EEEEEcHHHHHHHHHHcCC
Confidence 5999999999999888653
No 332
>TIGR03131 malonate_mdcH malonate decarboxylase, epsilon subunit. Members of this protein family are the epsilon subunit of malonate decarboxylase. This subunit has malonyl-CoA/dephospho-CoA acyltransferase activity. Malonate decarboxylase may be a soluble enzyme, or linked to membrane subunits and active as a sodium pump. The epsilon subunit is closely related to the malonyl CoA-acyl carrier protein (ACP) transacylase family described by TIGR00128, but acts on an ACP subunit of malonate decarboxylase that has an unusual coenzyme A derivative as its prothetic group.
Probab=30.36 E-value=97 Score=24.00 Aligned_cols=19 Identities=26% Similarity=0.225 Sum_probs=15.7
Q ss_pred CceEEeeccchHHHHHHHH
Q 039671 47 GRVFIGGGSAGGNIAHTLA 65 (195)
Q Consensus 47 ~~i~l~G~S~Gg~la~~~a 65 (195)
+...++|||.|=..|+.++
T Consensus 76 ~P~~v~GhS~GE~aAa~~a 94 (295)
T TIGR03131 76 RPSAVAGYSVGEYAAAVVA 94 (295)
T ss_pred CCcEEeecCHHHHHHHHHh
Confidence 5578999999998877766
No 333
>cd07023 S49_Sppa_N_C Signal peptide peptidase A (SppA), a serine protease, has catalytic Ser-Lys dyad. Signal peptide peptidase A (SppA; Peptidase S49; Protease IV): SppA is found in all three domains of life and is involved in the cleavage of signal peptides after their removal from the precursor proteins by signal peptidases. This subfamily contains members with either a single domain (sometimes referred to as 36K type), such as sohB peptidase, protein C and archaeal signal peptide peptidase, or an amino-terminal domain in addition to the carboxyl-terminal protease domain that is conserved in all the S49 family members (sometimes referred to as 67K type), similar to E. coli and Arabidopsis thaliana SppA peptidases. Site-directed mutagenesis and sequence analysis have shown these SppAs to be serine proteases. The predicted active site serine for members in this family occurs in a transmembrane domain. Mutagenesis studies also suggest that the catalytic center comprises a Ser-Lys dyad
Probab=30.24 E-value=77 Score=23.25 Aligned_cols=36 Identities=14% Similarity=0.115 Sum_probs=28.7
Q ss_pred CchHHHHHHHHHHHHHhccCCCCCCCCCCCCCCCceEEeeccchHHHHH
Q 039671 14 PACYEDSWAALNWVASHAGGNGPEPWLNDHADFGRVFIGGGSAGGNIAH 62 (195)
Q Consensus 14 p~~~~D~~~a~~~l~~~~~~~~~~~~~~~~~d~~~i~l~G~S~Gg~la~ 62 (195)
+..+.++..+++.+.+. -+.+-|+|.+.|.||.++.
T Consensus 16 ~~~~~~l~~~l~~a~~d-------------~~i~~ivl~~~s~Gg~~~~ 51 (208)
T cd07023 16 GIGADSLIEQLRKARED-------------DSVKAVVLRINSPGGSVVA 51 (208)
T ss_pred CCCHHHHHHHHHHHHhC-------------CCCcEEEEEEECCCCCHHH
Confidence 67888999999998765 3456789999999997654
No 334
>cd07231 Pat_SDP1-like Sugar-Dependent 1 like lipase. Sugar-Dependent 1 (SDP1) lipase has a patatin-like acyl-hydrolase domain that initiates the breakdown of storage oil in germinating Arabidopsis seeds. This acyl-hydrolase domain is homologus to yeast triacylglycerol lipase 3 and human adipose triglyceride lipase. This family includes SDP1 from Arabidopsis thaliana.
Probab=29.89 E-value=41 Score=26.87 Aligned_cols=18 Identities=28% Similarity=0.460 Sum_probs=15.7
Q ss_pred EEeeccchHHHHHHHHHH
Q 039671 50 FIGGGSAGGNIAHTLAFQ 67 (195)
Q Consensus 50 ~l~G~S~Gg~la~~~a~~ 67 (195)
++.|-|+|+.+|+.++..
T Consensus 99 ~i~GsSaGAivaa~~~~~ 116 (323)
T cd07231 99 VIAGSSVGSIVCAIIATR 116 (323)
T ss_pred EEEEECHHHHHHHHHHcC
Confidence 599999999999988764
No 335
>cd07221 Pat_PNPLA3 Patatin-like phospholipase domain containing protein 3. PNPLA3 is a triacylglycerol lipase that mediates triacylglycerol hydrolysis in adipocytes and is an indicator of the nutritional state. PNPLA3 is also known as adiponutrin (ADPN) or iPLA2-epsilon. Human adiponutrins are bound to the cell membrane of adipocytes and show transacylase, TG hydrolase, and PLA2 activity. This family includes patatin-like proteins: ADPN (adiponutrin) from mammals, PNPLA3 (Patatin-like phospholipase domain-containing protein 3), and iPLA2-epsilon (Calcium-independent phospholipase A2) from Homo sapiens.
Probab=29.28 E-value=43 Score=25.65 Aligned_cols=20 Identities=25% Similarity=0.149 Sum_probs=16.2
Q ss_pred eEEeeccchHHHHHHHHHHh
Q 039671 49 VFIGGGSAGGNIAHTLAFQV 68 (195)
Q Consensus 49 i~l~G~S~Gg~la~~~a~~~ 68 (195)
-.++|-|+|+..++.++...
T Consensus 34 ~~i~GtSAGAl~aa~~asg~ 53 (252)
T cd07221 34 RMFFGASAGALHCVTFLSGL 53 (252)
T ss_pred CEEEEEcHHHHHHHHHHhCC
Confidence 45999999999998777543
No 336
>PF10605 3HBOH: 3HB-oligomer hydrolase (3HBOH) ; InterPro: IPR016582 This entry represents a group of predicted D-(-)-3-hydroxybutyrate oligomer hydrolases (also known as 3HB-oligomer hydrolase), which function in the degradation of poly-3-hydroxybutyrate (PHB). These enzymes catalyse the hydrolysis of D(-)-3-hydroxybutyrate oligomers (3HB-oligomers) into 3HB-monomers [, ].; GO: 0047989 hydroxybutyrate-dimer hydrolase activity, 0019605 butyrate metabolic process, 0005615 extracellular space
Probab=29.23 E-value=2.4e+02 Score=24.90 Aligned_cols=40 Identities=25% Similarity=0.174 Sum_probs=31.0
Q ss_pred ceEEeeccchHHHHHHHHHHhccCCCCCCceeEEEeeccccCCCC
Q 039671 48 RVFIGGGSAGGNIAHTLAFQVGSIGLPRVKLVGVIMVHPFFGGTS 92 (195)
Q Consensus 48 ~i~l~G~S~Gg~la~~~a~~~~~~~~~~~~~~~~i~~~p~~~~~~ 92 (195)
-|+-.+-|-||.-++..+.+..+ -.|.+++..-|-+.+..
T Consensus 286 ~VIAssvSNGGgAal~AAEqD~~-----glIdgVvv~EP~v~~~~ 325 (690)
T PF10605_consen 286 LVIASSVSNGGGAALAAAEQDTQ-----GLIDGVVVSEPNVNLPP 325 (690)
T ss_pred EEEEEeecCccHHHHhHhhcccC-----CceeeEEecCCccCCCC
Confidence 35666789999988888888653 27899999888887754
No 337
>PF13676 TIR_2: TIR domain; PDB: 3H16_B 3UB4_A 2Y92_A 3UB3_A 3UB2_A.
Probab=29.00 E-value=75 Score=19.93 Aligned_cols=27 Identities=26% Similarity=0.258 Sum_probs=20.0
Q ss_pred EEEEEcCCccchhhHHHHHHHHHhcCCCccE
Q 039671 129 VLIFVAEKDFLKPVAMNYYEDLKKSGWKGTV 159 (195)
Q Consensus 129 ~~i~~g~~D~l~~~~~~~~~~l~~~~~g~~~ 159 (195)
+||.|+..| .+.+..+.+.|++. |.++
T Consensus 1 VFIS~~~~D--~~~a~~l~~~L~~~--g~~v 27 (102)
T PF13676_consen 1 VFISYSSED--REFAERLAERLESA--GIRV 27 (102)
T ss_dssp EEEEEEGGG--CCCHHHHHHHHHHT--T--E
T ss_pred eEEEecCCc--HHHHHHHHHHHhhc--CCEE
Confidence 578899888 45688888999998 5543
No 338
>cd03378 beta_CA_cladeC Carbonic anhydrases (CA) are zinc-containing enzymes that catalyze the reversible hydration of carbon dioxide in a two-step mechanism in which the nucleophilic attack of a zinc-bound hydroxide ion on carbon dioxide is followed by the regeneration of an active site by ionization of the zinc-bound water molecule and removal of a proton from the active site. CAs are ubiquitous enzymes involved in fundamental processes like photosynthesis, respiration, pH homeostasis and ion transport. There are three evolutionarily distinct families of CAs (the alpha-, beta-, and gamma-CAs) which show no significant sequence identity or structural similarity. Within the beta-CA family there are four evolutionarily distinct clades (A through D). The beta-CAs are multimeric enzymes (forming dimers,tetramers,hexamers and octamers) which are present in higher plants, algae, fungi, archaea and prokaryotes.
Probab=28.31 E-value=1.1e+02 Score=21.58 Aligned_cols=30 Identities=20% Similarity=0.287 Sum_probs=23.4
Q ss_pred HHHHHHHHHHHhccCCCCCCCCCCCCCCCceEEeeccchHHHH
Q 039671 19 DSWAALNWVASHAGGNGPEPWLNDHADFGRVFIGGGSAGGNIA 61 (195)
Q Consensus 19 D~~~a~~~l~~~~~~~~~~~~~~~~~d~~~i~l~G~S~Gg~la 61 (195)
++.++++|.... ...+.|+|+|||-=|.+.
T Consensus 77 ~~~~sl~yav~~-------------l~v~~IvV~GHt~CG~~~ 106 (154)
T cd03378 77 DVLGSLEYAVEV-------------LGVPLVVVLGHESCGAVA 106 (154)
T ss_pred hHHHHHHHHHHH-------------hCCCEEEEEcCCCccHHH
Confidence 567888888887 567899999999844443
No 339
>TIGR03127 RuMP_HxlB 6-phospho 3-hexuloisomerase. Members of this protein family are 6-phospho 3-hexuloisomerase (PHI), or the PHI domain of a fusion protein. This enzyme is part of the ribulose monophosphate (RuMP) pathway, which in one direction removes the toxic metabolite formaldehyde by assimilation into fructose-6-phosphate. In the other direction, in species lacking a complete pentose phosphate pathway, the RuMP pathway yields ribulose-5-phosphate, necessary for nucleotide biosynthesis, at the cost of also yielding formaldehyde. These latter species tend usually have a formaldehyde-activating enzyme to attach formaldehyde to the C1 carrier tetrahydromethanopterin.
Probab=28.24 E-value=1.5e+02 Score=21.03 Aligned_cols=25 Identities=20% Similarity=0.485 Sum_probs=19.7
Q ss_pred CCceEEeeccchHHHHHHHHHHhcc
Q 039671 46 FGRVFIGGGSAGGNIAHTLAFQVGS 70 (195)
Q Consensus 46 ~~~i~l~G~S~Gg~la~~~a~~~~~ 70 (195)
.++|+++|....+.+|..+..+...
T Consensus 30 a~~I~i~G~G~S~~~A~~~~~~l~~ 54 (179)
T TIGR03127 30 AKRIFVAGAGRSGLVGKAFAMRLMH 54 (179)
T ss_pred CCEEEEEecCHHHHHHHHHHHHHHh
Confidence 3589999988888888888877653
No 340
>COG4519 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=28.10 E-value=1.5e+02 Score=18.34 Aligned_cols=47 Identities=17% Similarity=0.078 Sum_probs=29.2
Q ss_pred HHHHHHHHHhcCCCccEEEEEecCCCc--cccccCCCchHHHHHHHHHHHHH
Q 039671 143 AMNYYEDLKKSGWKGTVELVETHGEGH--SFYFDNLKCEKAVELINKFVSFI 192 (195)
Q Consensus 143 ~~~~~~~l~~~~~g~~~~~~~~~g~~H--~f~~~~~~~~~~~~~~~~~~~fl 192 (195)
.+...++|... |+..+++. +|.-| ++....++-+-..+|+.+--++|
T Consensus 39 ~QDvikAlpgl--gi~l~FvQ-~G~Rnn~GyYql~dWGp~~~~Wv~E~h~~I 87 (95)
T COG4519 39 AQDVIKALPGL--GIVLEFVQ-EGARNNQGYYQLRDWGPVRREWVVEQHRRI 87 (95)
T ss_pred HHHHHHhCcCC--CeEEEeee-cccccCCCceEeeeccchhHHHHHHHHHHH
Confidence 45556677777 67777776 66555 55555555566667776655544
No 341
>PF13242 Hydrolase_like: HAD-hyrolase-like; PDB: 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A 2HX1_D 2X4D_A 3HLT_C 3L1U_B ....
Probab=28.05 E-value=71 Score=18.92 Aligned_cols=36 Identities=14% Similarity=0.162 Sum_probs=23.7
Q ss_pred CCCCceEEeecc-chHHHHHHHHHHhccCCCCCCceeEEEeeccccCC
Q 039671 44 ADFGRVFIGGGS-AGGNIAHTLAFQVGSIGLPRVKLVGVIMVHPFFGG 90 (195)
Q Consensus 44 ~d~~~i~l~G~S-~Gg~la~~~a~~~~~~~~~~~~~~~~i~~~p~~~~ 90 (195)
+++++++++|+| .--. ..+... .++.+...+|..+.
T Consensus 19 ~~~~~~~~VGD~~~~Di---~~a~~~--------G~~~ilV~tG~~~~ 55 (75)
T PF13242_consen 19 VDPSRCVMVGDSLETDI---EAAKAA--------GIDTILVLTGVYSP 55 (75)
T ss_dssp SGGGGEEEEESSTTTHH---HHHHHT--------TSEEEEESSSSSCC
T ss_pred CCHHHEEEEcCCcHhHH---HHHHHc--------CCcEEEECCCCCCH
Confidence 789999999999 4332 223332 46677777766555
No 342
>PLN02994 1-aminocyclopropane-1-carboxylate synthase
Probab=28.03 E-value=1.8e+02 Score=20.31 Aligned_cols=37 Identities=11% Similarity=0.222 Sum_probs=21.2
Q ss_pred CCCCceEEeeccchHHHHHHHHHHhccCCCCCCceeEEEeecccc
Q 039671 44 ADFGRVFIGGGSAGGNIAHTLAFQVGSIGLPRVKLVGVIMVHPFF 88 (195)
Q Consensus 44 ~d~~~i~l~G~S~Gg~la~~~a~~~~~~~~~~~~~~~~i~~~p~~ 88 (195)
+++++|++...+..|...+..+...+ =.++++-.|.+
T Consensus 115 ~~pd~Ivvt~Ga~~al~~l~~~l~dp--------GD~VlVp~P~Y 151 (153)
T PLN02994 115 FDADMIVLSAGATAANEIIMFCIADP--------GDAFLVPTPYY 151 (153)
T ss_pred cchhheEEcCCHHHHHHHHHHHHcCC--------CCEEEEeCCCC
Confidence 68889988866655544433333321 13566666654
No 343
>cd05007 SIS_Etherase N-acetylmuramic acid 6-phosphate etherase. Members of this family contain the SIS (Sugar ISomerase) domain. The SIS domain is found in many phosphosugar isomerases and phosphosugar binding proteins. The bacterial cell wall sugar N-acetylmuramic acid carries a unique D-lactyl ether substituent at the C3 position. The etherase catalyzes the cleavage of the lactyl ether bond of N-acetylmuramic acid 6-phosphate.
Probab=27.76 E-value=2.3e+02 Score=21.71 Aligned_cols=55 Identities=22% Similarity=0.286 Sum_probs=33.9
Q ss_pred HHHHHHHHHHHHHhccCCCCCCCCCCCCCCCceEEeeccchHHHHHHHHHHhcc-CCCCCCceeEEEe
Q 039671 17 YEDSWAALNWVASHAGGNGPEPWLNDHADFGRVFIGGGSAGGNIAHTLAFQVGS-IGLPRVKLVGVIM 83 (195)
Q Consensus 17 ~~D~~~a~~~l~~~~~~~~~~~~~~~~~d~~~i~l~G~S~Gg~la~~~a~~~~~-~~~~~~~~~~~i~ 83 (195)
++.+..+++.+.+... +..||+++|.-..|.++..-+..... -+.++..+.+++.
T Consensus 32 l~~I~~av~~~~~~l~------------~ggrl~~~GaGtSg~la~~da~e~~~tfg~~~~~v~~~ia 87 (257)
T cd05007 32 LPQIARAVDAAAERLR------------AGGRLIYVGAGTSGRLGVLDASELPPTFGTPPERVVGLIA 87 (257)
T ss_pred HHHHHHHHHHHHHHHH------------cCCEEEEEcCcHHHHHHHHHHHhccccccCCcccceEEEe
Confidence 3455666666655542 45689999999888888655555432 2333345556555
No 344
>cd07223 Pat_PNPLA5-mammals Patatin-like phospholipase domain containing protein 5. PNPLA5, also known as GS2L (GS2-like), plays a role in regulation of adipocyte differentiation. PNPLA5 is expressed in brain tissue in high mRNA levels and low levels in liver tissue. There is no concrete evidence in support of the enzymatic activity of GS2L. This family includes patatin-like proteins: GS2L (GS2-like) and PNPLA5 (Patatin-like phospholipase domain-containing protein 5) reported exclusively in mammals.
Probab=27.07 E-value=74 Score=26.25 Aligned_cols=20 Identities=25% Similarity=0.149 Sum_probs=15.7
Q ss_pred ceEEeeccchHHHHHHHHHH
Q 039671 48 RVFIGGGSAGGNIAHTLAFQ 67 (195)
Q Consensus 48 ~i~l~G~S~Gg~la~~~a~~ 67 (195)
.-.+.|.|+|+..|+.++..
T Consensus 42 ~~~iaGaSAGAL~aa~~a~g 61 (405)
T cd07223 42 ARRIYGSSSGALNAVSIVCG 61 (405)
T ss_pred CCeeeeeCHHHHHHHHHHhC
Confidence 34589999999988877654
No 345
>COG3340 PepE Peptidase E [Amino acid transport and metabolism]
Probab=26.97 E-value=16 Score=27.30 Aligned_cols=14 Identities=50% Similarity=0.337 Sum_probs=11.8
Q ss_pred eEEeeccchHHHHH
Q 039671 49 VFIGGGSAGGNIAH 62 (195)
Q Consensus 49 i~l~G~S~Gg~la~ 62 (195)
+..+|+|||+++|.
T Consensus 119 ~~YiG~SAGA~ia~ 132 (224)
T COG3340 119 TPYIGWSAGANIAG 132 (224)
T ss_pred CceEEeccCceeec
Confidence 66899999998775
No 346
>COG3675 Predicted lipase [Lipid metabolism]
Probab=26.59 E-value=33 Score=26.98 Aligned_cols=20 Identities=35% Similarity=0.350 Sum_probs=16.5
Q ss_pred CceEEeeccchHHHHHHHHH
Q 039671 47 GRVFIGGGSAGGNIAHTLAF 66 (195)
Q Consensus 47 ~~i~l~G~S~Gg~la~~~a~ 66 (195)
-++++.|||.||.++...+.
T Consensus 175 Yrig~tghS~g~aii~vrGt 194 (332)
T COG3675 175 YRIGITGHSSGGAIICVRGT 194 (332)
T ss_pred eEEEEEeecCCccEEEEecc
Confidence 57999999999988765555
No 347
>PRK10886 DnaA initiator-associating protein DiaA; Provisional
Probab=26.28 E-value=1.9e+02 Score=21.28 Aligned_cols=24 Identities=13% Similarity=0.212 Sum_probs=20.5
Q ss_pred CCCceEEeeccchHHHHHHHHHHh
Q 039671 45 DFGRVFIGGGSAGGNIAHTLAFQV 68 (195)
Q Consensus 45 d~~~i~l~G~S~Gg~la~~~a~~~ 68 (195)
...||+++|-...|.+|..++.+.
T Consensus 40 ~~~rI~~~G~GgSa~~A~~~a~~l 63 (196)
T PRK10886 40 NGNKILCCGNGTSAANAQHFAASM 63 (196)
T ss_pred cCCEEEEEECcHHHHHHHHHHHHH
Confidence 457999999998889999888875
No 348
>PF07981 Plasmod_MYXSPDY: Plasmodium repeat_MYXSPDY; InterPro: IPR012598 This repeat is found in two hypothetical Plasmodium proteins.
Probab=26.22 E-value=26 Score=14.53 Aligned_cols=6 Identities=50% Similarity=0.767 Sum_probs=2.8
Q ss_pred CCcCCC
Q 039671 2 SVEYGL 7 (195)
Q Consensus 2 ~~~Yrl 7 (195)
|++|.|
T Consensus 4 SPdytL 9 (17)
T PF07981_consen 4 SPDYTL 9 (17)
T ss_pred CCCceE
Confidence 445543
No 349
>PHA01735 hypothetical protein
Probab=26.21 E-value=62 Score=19.38 Aligned_cols=16 Identities=38% Similarity=0.532 Sum_probs=13.7
Q ss_pred chHHHHHHHHHHHHHh
Q 039671 15 ACYEDSWAALNWVASH 30 (195)
Q Consensus 15 ~~~~D~~~a~~~l~~~ 30 (195)
+.-.|+.+|.+||+++
T Consensus 30 ATtaDL~AA~d~Lk~N 45 (76)
T PHA01735 30 ATTADLRAACDWLKSN 45 (76)
T ss_pred ccHHHHHHHHHHHHHC
Confidence 4457999999999987
No 350
>smart00827 PKS_AT Acyl transferase domain in polyketide synthase (PKS) enzymes.
Probab=26.01 E-value=1.2e+02 Score=23.28 Aligned_cols=19 Identities=26% Similarity=0.017 Sum_probs=15.2
Q ss_pred ceEEeeccchHHHHHHHHH
Q 039671 48 RVFIGGGSAGGNIAHTLAF 66 (195)
Q Consensus 48 ~i~l~G~S~Gg~la~~~a~ 66 (195)
.-+++|||.|-.-|+.++.
T Consensus 83 p~~~~GhSlGE~aA~~~ag 101 (298)
T smart00827 83 PDAVVGHSLGEIAAAYVAG 101 (298)
T ss_pred ccEEEecCHHHHHHHHHhC
Confidence 4589999999988877663
No 351
>PF00698 Acyl_transf_1: Acyl transferase domain; InterPro: IPR014043 Enzymes like bacterial malonyl CoA-acly carrier protein transacylase (2.3.1.39 from EC) and eukaryotic fatty acid synthase (2.3.1.85 from EC) that are involved in fatty acid biosynthesis belong to this group. Also included are the polyketide synthases 6-methylsalicylic acid synthase (2.3.1 from EC), a multifunctional enzyme that involved in the biosynthesis of patulin and conidial green pigment synthase (2.3.1 from EC).; PDB: 3HHD_C 2JFD_D 2JFK_A 3G87_A 3IM9_A 2QO3_B 3IM8_A 3EZO_A 2QJ3_A 2QC3_A ....
Probab=25.90 E-value=87 Score=24.65 Aligned_cols=37 Identities=16% Similarity=0.132 Sum_probs=23.1
Q ss_pred CCEEEEEcCCccchhhHHHHHHHHHhcCCCccEEEEEecCCCc
Q 039671 127 ERVLIFVAEKDFLKPVAMNYYEDLKKSGWKGTVELVETHGEGH 169 (195)
Q Consensus 127 pp~~i~~g~~D~l~~~~~~~~~~l~~~~~g~~~~~~~~~g~~H 169 (195)
|--+++.|..+ ....+.+.|++. |..++......+.|
T Consensus 156 ~~q~visG~~~----~l~~~~~~l~~~--~~~~~~l~v~~afH 192 (318)
T PF00698_consen 156 PRQVVISGERE----ALEALVERLKAE--GIKAKRLPVSYAFH 192 (318)
T ss_dssp TTEEEEEEEHH----HHHHHHHHHHHT--TSEEEEESSSSETT
T ss_pred ccccccCCCHH----HHHHHHHHhhcc--ceeEEEeeeecccc
Confidence 44555555554 355577888888 65666655666666
No 352
>cd01080 NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of methylene-tetrahydrofolate dehydrogenase/cyclohydrolase. NADP binding domain of the Methylene-Tetrahydrofolate Dehydrogenase/cyclohydrolase (m-THF DH/cyclohydrolase) bifunctional enzyme. Tetrahydrofolate is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofucntional DH, as well a
Probab=25.65 E-value=1.9e+02 Score=20.61 Aligned_cols=37 Identities=16% Similarity=0.056 Sum_probs=22.5
Q ss_pred HHHHHHHHHHhccCCCCCCCCCCCCCCCceEEeecc-chHHHHHHHHH
Q 039671 20 SWAALNWVASHAGGNGPEPWLNDHADFGRVFIGGGS-AGGNIAHTLAF 66 (195)
Q Consensus 20 ~~~a~~~l~~~~~~~~~~~~~~~~~d~~~i~l~G~S-~Gg~la~~~a~ 66 (195)
..++++.+.+.... +...++.|+|.+ ++|..++....
T Consensus 28 ~~a~v~l~~~~~~~----------l~gk~vlViG~G~~~G~~~a~~L~ 65 (168)
T cd01080 28 PAGILELLKRYGID----------LAGKKVVVVGRSNIVGKPLAALLL 65 (168)
T ss_pred HHHHHHHHHHcCCC----------CCCCEEEEECCcHHHHHHHHHHHh
Confidence 34556666555432 567899999998 45654443333
No 353
>PRK14194 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=25.20 E-value=1.6e+02 Score=23.32 Aligned_cols=24 Identities=21% Similarity=0.102 Sum_probs=20.4
Q ss_pred CCCCceEEeecc--chHHHHHHHHHH
Q 039671 44 ADFGRVFIGGGS--AGGNIAHTLAFQ 67 (195)
Q Consensus 44 ~d~~~i~l~G~S--~Gg~la~~~a~~ 67 (195)
+...+|+++|.| +|--||..+..+
T Consensus 157 l~Gk~V~vIG~s~ivG~PmA~~L~~~ 182 (301)
T PRK14194 157 LTGKHAVVIGRSNIVGKPMAALLLQA 182 (301)
T ss_pred CCCCEEEEECCCCccHHHHHHHHHHC
Confidence 667899999997 999999888765
No 354
>cd05006 SIS_GmhA Phosphoheptose isomerase is a member of the SIS (Sugar ISomerase) superfamily. Phosphoheptose isomerase catalyzes the isomerization of sedoheptulose 7-phosphate into D-glycero-D-mannoheptose 7-phosphate. This is the first step of the biosynthesis of gram-negative bacteria inner core lipopolysaccharide precursor, L-glycero-D-mannoheptose (Gmh).
Probab=24.14 E-value=2e+02 Score=20.26 Aligned_cols=41 Identities=20% Similarity=0.187 Sum_probs=29.1
Q ss_pred hHHHHHHHHHHHHHhccCCCCCCCCCCCCCCCceEEeeccchHHHHHHHHHHh
Q 039671 16 CYEDSWAALNWVASHAGGNGPEPWLNDHADFGRVFIGGGSAGGNIAHTLAFQV 68 (195)
Q Consensus 16 ~~~D~~~a~~~l~~~~~~~~~~~~~~~~~d~~~i~l~G~S~Gg~la~~~a~~~ 68 (195)
..+++..+.+.+.+.. ...++|+++|...-+.+|..++...
T Consensus 15 ~~~~i~~a~~~i~~~i------------~~~~~I~i~G~G~S~~~A~~~~~~l 55 (177)
T cd05006 15 LAEAIEQAAQLLAEAL------------LNGGKILICGNGGSAADAQHFAAEL 55 (177)
T ss_pred hHHHHHHHHHHHHHHH------------HCCCEEEEEeCcHHHHHHHHHHHHH
Confidence 3566677777776653 2346899999987778877777654
No 355
>cd00394 Clp_protease_like Caseinolytic protease (ClpP) is an ATP-dependent protease. Clp protease (caseinolytic protease; ClpP; endopeptidase Clp; Peptidase S14; ATP-dependent protease, ClpAP)-like enzymes are highly conserved serine proteases and belong to the ClpP/Crotonase superfamily. Included in this family are Clp proteases that are involved in a number of cellular processes such as degradation of misfolded proteins, regulation of short-lived proteins and housekeeping removal of dysfunctional proteins. They are also implicated in the control of cell growth, targeting DNA-binding protein from starved cells. The functional Clp protease is comprised of two components: a proteolytic component and one of several regulatory ATPase components, both of which are required for effective levels of protease activity in the presence of ATP. Active site consists of the triad Ser, His and Asp, preferring hydrophobic or non-polar residues at P1 or P1' positions. The protease exists as a tetradec
Probab=24.11 E-value=2e+02 Score=19.88 Aligned_cols=37 Identities=8% Similarity=0.207 Sum_probs=26.3
Q ss_pred CchHHHHHHHHHHHHHhccCCCCCCCCCCCCCCCceEEeeccchHHHHHH
Q 039671 14 PACYEDSWAALNWVASHAGGNGPEPWLNDHADFGRVFIGGGSAGGNIAHT 63 (195)
Q Consensus 14 p~~~~D~~~a~~~l~~~~~~~~~~~~~~~~~d~~~i~l~G~S~Gg~la~~ 63 (195)
+..++++.+.++.+.+. -..+-|+|...|.||.++..
T Consensus 10 ~~~~~~l~~~l~~a~~d-------------~~~~~ivl~~~s~Gg~~~~~ 46 (161)
T cd00394 10 DVSADQLAAQIRFAEAD-------------NSVKAIVLEVNTPGGRVDAG 46 (161)
T ss_pred cchHHHHHHHHHHHHhC-------------CCCceEEEEEECCCcCHHHH
Confidence 35667888888877665 23456888899999976553
No 356
>COG5023 Tubulin [Cytoskeleton]
Probab=24.09 E-value=1.7e+02 Score=24.04 Aligned_cols=58 Identities=19% Similarity=0.073 Sum_probs=36.5
Q ss_pred chHHHHHHHHHHHHHhccCCCCCCCCCCCCCCCceEEeeccchHH----HHHHHHHHhccCCCCCCceeEEEeeccc
Q 039671 15 ACYEDSWAALNWVASHAGGNGPEPWLNDHADFGRVFIGGGSAGGN----IAHTLAFQVGSIGLPRVKLVGVIMVHPF 87 (195)
Q Consensus 15 ~~~~D~~~a~~~l~~~~~~~~~~~~~~~~~d~~~i~l~G~S~Gg~----la~~~a~~~~~~~~~~~~~~~~i~~~p~ 87 (195)
+.++|+.+.++...+. .|.-+=+++=||.||+ +...+..+++.... .++....+++|.
T Consensus 111 e~~ddvmd~IrreAd~-------------cD~LqGF~l~HS~gGGTGSG~GslLLerl~~eyp--kK~~~tfSV~P~ 172 (443)
T COG5023 111 EIIDDVMDMIRREADG-------------CDGLQGFLLLHSLGGGTGSGLGSLLLERLREEYP--KKIKLTFSVFPA 172 (443)
T ss_pred HHHHHHHHHHHHHhhc-------------CccccceeeeeeccCcCcccHHHHHHHHHHHhcc--hhheeEEEeccC
Confidence 3556666666555544 5666778888898874 44455555554332 377777888885
No 357
>cd00286 Tubulin_FtsZ Tubulin/FtsZ: Family includes tubulin alpha-, beta-, gamma-, delta-, and epsilon-tubulins as well as FtsZ, all of which are involved in polymer formation. Tubulin is the major component of microtubules, but also exists as a heterodimer and as a curved oligomer. Microtubules exist in all eukaryotic cells and are responsible for many functions, including cellular transport, cell motility, and mitosis. FtsZ forms a ring-shaped septum at the site of bacterial cell division, which is required for constriction of cell membrane and cell envelope to yield two daughter cells. FtsZ can polymerize into tubes, sheets, and rings in vitro and is ubiquitous in eubacteria, archaea, and chloroplasts.
Probab=23.88 E-value=2.5e+02 Score=22.27 Aligned_cols=58 Identities=19% Similarity=0.064 Sum_probs=34.3
Q ss_pred hHHHHHHHHHHHHHhccCCCCCCCCCCCCCCCceEEeeccchH----HHHHHHHHHhccCCCCCCceeEEEeecccc
Q 039671 16 CYEDSWAALNWVASHAGGNGPEPWLNDHADFGRVFIGGGSAGG----NIAHTLAFQVGSIGLPRVKLVGVIMVHPFF 88 (195)
Q Consensus 16 ~~~D~~~a~~~l~~~~~~~~~~~~~~~~~d~~~i~l~G~S~Gg----~la~~~a~~~~~~~~~~~~~~~~i~~~p~~ 88 (195)
..+++.+.++...+. .|.-..+++=+|+|| .++..++...++.... .+...+.+.|..
T Consensus 71 ~~e~i~~~ir~~~E~-------------cD~~~gf~i~~slgGGTGsG~~~~i~e~l~d~y~~--~~~~~~~v~P~~ 132 (328)
T cd00286 71 YQEEILDIIRKEAEE-------------CDSLQGFFITHSLGGGTGSGLGPVLAERLKDEYPK--RLKITFSILPGP 132 (328)
T ss_pred HHHHHHHHHHHHHHh-------------CCCccceEEEeecCCCccccHHHHHHHHHHHHcCc--cceeEEEecCCC
Confidence 455666666666555 555566777777766 5666777676654321 344445555543
No 358
>PRK14875 acetoin dehydrogenase E2 subunit dihydrolipoyllysine-residue acetyltransferase; Provisional
Probab=23.87 E-value=3.4e+02 Score=21.40 Aligned_cols=62 Identities=13% Similarity=0.064 Sum_probs=30.8
Q ss_pred CCCEEEEEcCCccchhhHHHHHHHHHhcCCCccEEEEEecCCCccccccCCCchHHHHHHHHHHHHHH
Q 039671 126 CERVLIFVAEKDFLKPVAMNYYEDLKKSGWKGTVELVETHGEGHSFYFDNLKCEKAVELINKFVSFIT 193 (195)
Q Consensus 126 ~pp~~i~~g~~D~l~~~~~~~~~~l~~~~~g~~~~~~~~~g~~H~f~~~~~~~~~~~~~~~~~~~fl~ 193 (195)
-||++++||-...... -..+...|.+ .+++..+...+|+...............+.+.++++
T Consensus 131 ~~~vl~~HG~~~~~~~-~~~~~~~l~~-----~~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~ 192 (371)
T PRK14875 131 GTPVVLIHGFGGDLNN-WLFNHAALAA-----GRPVIALDLPGHGASSKAVGAGSLDELAAAVLAFLD 192 (371)
T ss_pred CCeEEEECCCCCccch-HHHHHHHHhc-----CCEEEEEcCCCCCCCCCCCCCCCHHHHHHHHHHHHH
Confidence 3679999985443222 1222333422 257777777778765322111223444445555544
No 359
>KOG4150 consensus Predicted ATP-dependent RNA helicase [RNA processing and modification]
Probab=23.77 E-value=2.3e+02 Score=25.05 Aligned_cols=42 Identities=12% Similarity=0.080 Sum_probs=31.9
Q ss_pred CCCEEEEEcCCccch---hhHHHHHHHHHhcCCCccEEEEEecCCCc
Q 039671 126 CERVLIFVAEKDFLK---PVAMNYYEDLKKSGWKGTVELVETHGEGH 169 (195)
Q Consensus 126 ~pp~~i~~g~~D~l~---~~~~~~~~~l~~~~~g~~~~~~~~~g~~H 169 (195)
+-|+||.++.+|.-. ..-.+|+++-.+. .-+.++..|...+-
T Consensus 898 ~~P~FI~~~~~dI~TECKApEKEfaErqt~R--~RPaRLIFYD~~G~ 942 (1034)
T KOG4150|consen 898 VVPTFITCNYSDIATECKAPEKEFAERQTQR--YRPARLIFYDPGGT 942 (1034)
T ss_pred hcceEEecCchhhcccCCCchHHHHHhhhhc--cCcceEEEEcCCCC
Confidence 348999999999644 3467788877777 67899999987555
No 360
>PF08282 Hydrolase_3: haloacid dehalogenase-like hydrolase; InterPro: IPR013200 The Haloacid Dehydrogenase (HAD) superfamily includes phosphatases, phosphonatases, P-type ATPases, beta-phosphoglucomutases, phosphomannomutases, and dehalogenases, which are involved in a variety of cellular processes ranging from amino acid biosynthesis to detoxification []. This HAD domain is found in several distinct enzymes including: Phospholipid-transporting ATPase 1 (3.6.3.1 from EC), a putative lipid-flipping enzyme involved in cold tolerance in Arabidopsis [] 3-deoxy-D-manno-octulosonate (KDO) 8-phosphate phosphatase (3.1.3.45 from EC), which catalyses the final step in the biosynthesis of KDO - a component of lipopolysaccharide in Gram-negative bacteria [] Mannosyl-3-phosphoglycerate phosphatase (3.1.3.70 from EC), which hydrolyzes mannosyl-3-phosphoglycerate to form the osmolyte mannosylglycerate [] Phosphoglycolate phopshatase (3.1.3.18 from EC), which catalyses the dephosphorylation of 2-phosphoglycolate [] ; PDB: 2B30_B 3R4C_A 1XVI_B 3IJ5_B 3MMZ_C 3L7Y_A 1XPJ_C 1RLT_B 1RLM_B 2HF2_A ....
Probab=23.66 E-value=98 Score=22.67 Aligned_cols=26 Identities=15% Similarity=0.174 Sum_probs=19.5
Q ss_pred HHHHHHHHHhccCCCCCCCCCCCCCCCceEEeeccch
Q 039671 21 WAALNWVASHAGGNGPEPWLNDHADFGRVFIGGGSAG 57 (195)
Q Consensus 21 ~~a~~~l~~~~~~~~~~~~~~~~~d~~~i~l~G~S~G 57 (195)
..+++++.+... ++.++++.+|+|.=
T Consensus 188 ~~ai~~l~~~~~-----------i~~~~~~~~GD~~N 213 (254)
T PF08282_consen 188 GSAIKYLLEYLG-----------ISPEDIIAFGDSEN 213 (254)
T ss_dssp HHHHHHHHHHHT-----------TSGGGEEEEESSGG
T ss_pred HHHHHHHhhhcc-----------cccceeEEeecccc
Confidence 356777776653 78889999999963
No 361
>PF00091 Tubulin: Tubulin/FtsZ family, GTPase domain; InterPro: IPR003008 This domain is found in all tubulin chains, as well as the bacterial FtsZ family of proteins. These proteins are involved in polymer formation. Tubulin is the major component of microtubules, while FtsZ is the polymer-forming protein of bacterial cell division, it is part of a ring in the middle of the dividing cell that is required for constriction of cell membrane and cell envelope to yield two daughter cells. FtsZ and tubulin are GTPases, this entry is the GTPase domain. FtsZ can polymerise into tubes, sheets, and rings in vitro and is ubiquitous in bacteria and archaea.; GO: 0051258 protein polymerization, 0043234 protein complex; PDB: 3E22_B 1SA1_D 3DU7_B 2P4N_B 3DCO_B 1Z2B_D 1SA0_B 2XRP_C 1TVK_B 2BTQ_B ....
Probab=23.43 E-value=2.4e+02 Score=20.77 Aligned_cols=42 Identities=24% Similarity=0.100 Sum_probs=24.3
Q ss_pred CCCCceEEeeccchHHH----HHHHHHHhccCCCCCCceeEEEeeccc
Q 039671 44 ADFGRVFIGGGSAGGNI----AHTLAFQVGSIGLPRVKLVGVIMVHPF 87 (195)
Q Consensus 44 ~d~~~i~l~G~S~Gg~l----a~~~a~~~~~~~~~~~~~~~~i~~~p~ 87 (195)
.|.-..+++=+|+||.. +..++...++... ..+...+.+.|.
T Consensus 121 ~d~~~~~~i~~slgGGTGSG~~~~l~~~l~~~y~--~~~~~~~~ilP~ 166 (216)
T PF00091_consen 121 CDSLDGFFIVHSLGGGTGSGLGPVLAEMLREEYP--KKPIISFSILPF 166 (216)
T ss_dssp STTESEEEEEEESSSSHHHHHHHHHHHHHHHTST--TSEEEEEEEE-C
T ss_pred ccccccceecccccceeccccccccchhhhcccc--ccceeecccccc
Confidence 35556777778887753 4455555554321 246666777777
No 362
>PF09904 HTH_43: Winged helix-turn helix; InterPro: IPR017162 There is currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function.; PDB: 3KE2_B.
Probab=23.30 E-value=1.7e+02 Score=18.66 Aligned_cols=48 Identities=17% Similarity=0.117 Sum_probs=25.6
Q ss_pred HHHHHHHHHhcCCCccEEEEEecCCCc--cccccCCCchHHHHHHHHHHHHHH
Q 039671 143 AMNYYEDLKKSGWKGTVELVETHGEGH--SFYFDNLKCEKAVELINKFVSFIT 193 (195)
Q Consensus 143 ~~~~~~~l~~~~~g~~~~~~~~~g~~H--~f~~~~~~~~~~~~~~~~~~~fl~ 193 (195)
.+...++|.+. |+.+.++. .|.-| |+....++-+-..+|+..-++.|+
T Consensus 38 ~Qd~i~aL~~~--~I~~~Fvq-~G~R~~~GyY~i~~WG~id~~wi~~~~~~i~ 87 (90)
T PF09904_consen 38 IQDTIKALPEL--GIECEFVQ-DGERNNAGYYRISDWGPIDRKWIADHLQEIK 87 (90)
T ss_dssp HHHHHHGGGGG--T-EEEEE---TTS-S--EEEEEE-TTB-HHHHHHHHHHHH
T ss_pred HHHHHHHhhcC--CeEEEEEe-cCccCCCCcEEeeecCCCCHHHHHHHHHHHH
Confidence 45555667777 67888777 77666 455555544555677766555554
No 363
>PF01494 FAD_binding_3: FAD binding domain; InterPro: IPR002938 Monooxygenases incorporate one hydroxyl group into substrates and are found in many metabolic pathways. In this reaction, two atoms of dioxygen are reduced to one hydroxyl group and one H2O molecule by the concomitant oxidation of NAD(P)H []. P-hydroxybenzoate hydroxylase from Pseudomonas fluorescens contains this sequence motif (present in in flavoprotein hydroxylases) with a putative dual function in FAD and NADPH binding [].; PDB: 2Y6R_B 2XYO_C 2Y6Q_C 3P9U_D 2XDO_C 1FOH_D 1PN0_A 3IHG_C 2QA2_A 2VOU_C ....
Probab=22.86 E-value=1.2e+02 Score=23.53 Aligned_cols=21 Identities=24% Similarity=0.158 Sum_probs=14.2
Q ss_pred ceEEeeccchHHHHHHHHHHh
Q 039671 48 RVFIGGGSAGGNIAHTLAFQV 68 (195)
Q Consensus 48 ~i~l~G~S~Gg~la~~~a~~~ 68 (195)
+|+|+|.+.+|..++.+..+.
T Consensus 3 dV~IvGaG~aGl~~A~~L~~~ 23 (356)
T PF01494_consen 3 DVAIVGAGPAGLAAALALARA 23 (356)
T ss_dssp EEEEE--SHHHHHHHHHHHHT
T ss_pred eEEEECCCHHHHHHHHHHHhc
Confidence 599999999997666555554
No 364
>cd03413 CbiK_C Anaerobic cobalamin biosynthetic cobalt chelatase (CbiK), C-terminal domain. CbiK is part of the cobalt-early path for cobalamin biosynthesis. It catalyzes the insertion of cobalt into the oxidized form of precorrin-2, factor II (sirohydrochlorin), the second step of the anaerobic branch of vitamin B12 biosynthesis. CbiK belongs to the class II family of chelatases, and is a homomeric enzyme that does not require ATP for its enzymatic activity.
Probab=22.17 E-value=1e+02 Score=19.95 Aligned_cols=33 Identities=15% Similarity=0.184 Sum_probs=24.2
Q ss_pred CEEEEEcCC---ccchhhHHHHHHHHHhcCCCccEEEE
Q 039671 128 RVLIFVAEK---DFLKPVAMNYYEDLKKSGWKGTVELV 162 (195)
Q Consensus 128 p~~i~~g~~---D~l~~~~~~~~~~l~~~~~g~~~~~~ 162 (195)
|+|++.|.+ |..-++...+...|+++ |..++.+
T Consensus 63 Pl~L~~G~H~~~Dipge~~~SW~~~l~~~--g~~v~~~ 98 (103)
T cd03413 63 PLMLVAGDHAHNDMAGDEPDSWKSILEAA--GIKVETV 98 (103)
T ss_pred ehhheecccchhcCCCCCchhHHHHHHHC--CCeeEEE
Confidence 799997654 76666667888999999 5666644
No 365
>cd05005 SIS_PHI Hexulose-6-phosphate isomerase (PHI). PHI is a member of the SIS (Sugar ISomerase domain) superfamily. In the ribulose monophosphate pathway of formaldehyde fixation, hexulose-6-phosphate synthase catalyzes the condensation of ribulose-5-phosphate with formadelhyde to become hexulose-6-phosphate, which is then isomerized to fructose-6-phosphate by PHI.
Probab=21.86 E-value=2.6e+02 Score=19.72 Aligned_cols=24 Identities=25% Similarity=0.472 Sum_probs=18.9
Q ss_pred CCceEEeeccchHHHHHHHHHHhc
Q 039671 46 FGRVFIGGGSAGGNIAHTLAFQVG 69 (195)
Q Consensus 46 ~~~i~l~G~S~Gg~la~~~a~~~~ 69 (195)
.++|+++|....+.+|..++.+..
T Consensus 33 a~~I~i~G~G~S~~~A~~~~~~l~ 56 (179)
T cd05005 33 AKRIFVYGAGRSGLVAKAFAMRLM 56 (179)
T ss_pred CCeEEEEecChhHHHHHHHHHHHH
Confidence 468999998877778878877764
No 366
>COG3621 Patatin [General function prediction only]
Probab=21.84 E-value=61 Score=26.09 Aligned_cols=21 Identities=43% Similarity=0.613 Sum_probs=17.7
Q ss_pred EEeeccchHHHHHHHHHHhcc
Q 039671 50 FIGGGSAGGNIAHTLAFQVGS 70 (195)
Q Consensus 50 ~l~G~S~Gg~la~~~a~~~~~ 70 (195)
++.|.|.||.+++.++...++
T Consensus 45 l~~GTSiGgilal~La~~ks~ 65 (394)
T COG3621 45 LIGGTSIGGILALGLALGKSP 65 (394)
T ss_pred eecCccHHHHHHHHHhcCCCC
Confidence 588999999999998876544
No 367
>KOG1578 consensus Predicted carbonic anhydrase involved in protection against oxidative damage [Inorganic ion transport and metabolism]
Probab=21.75 E-value=52 Score=25.50 Aligned_cols=36 Identities=22% Similarity=0.342 Sum_probs=27.0
Q ss_pred HHHHHHHHHHhccCCCCCCCCCCCCCCCceEEeeccchHHHHHHHHHHh
Q 039671 20 SWAALNWVASHAGGNGPEPWLNDHADFGRVFIGGGSAGGNIAHTLAFQV 68 (195)
Q Consensus 20 ~~~a~~~l~~~~~~~~~~~~~~~~~d~~~i~l~G~S~Gg~la~~~a~~~ 68 (195)
+.++++|-... ...++|.++|||.=|+++..+....
T Consensus 140 ~~AalE~aV~~-------------lkvenIiv~ghs~cgGik~~m~~~~ 175 (276)
T KOG1578|consen 140 VGAALEYAVTT-------------LKVENIIVIGHSLCGGIKGLMSFSL 175 (276)
T ss_pred ccchHHHHHHH-------------hccceEEEeccccCCchhhcccccc
Confidence 34667766666 5678999999999888887666554
No 368
>cd03129 GAT1_Peptidase_E_like Type 1 glutamine amidotransferase (GATase1)-like domain found in peptidase E_like proteins. Type 1 glutamine amidotransferase (GATase1)-like domain found in peptidase E_like proteins. This group contains proteins similar to the aspartyl dipeptidases Salmonella typhimurium peptidase E and Xenopus laevis peptidase E and, extracellular cyanophycinases from Pseudomonas anguilliseptica BI (CphE) and Synechocystis sp. PCC 6803 CphB. In bacteria peptidase E is believed to play a role in degrading peptides generated by intracellular protein breakdown or imported into the cell as nutrient sources. Peptidase E uniquely hydrolyses only Asp-X dipeptides (where X is any amino acid), and one tripeptide Asp-Gly-Gly. Cyanophycinases are intracellular exopeptidases which hydrolyze the polymer cyanophycin (multi L-arginyl-poly-L-aspartic acid) to the dipeptide beta-Asp-Arg. Peptidase E and cyanophycinases are thought to have a Ser-His-Glu catalytic triad which differs from
Probab=21.70 E-value=68 Score=23.54 Aligned_cols=18 Identities=39% Similarity=0.530 Sum_probs=13.9
Q ss_pred CceEEeeccchHHHHHHH
Q 039671 47 GRVFIGGGSAGGNIAHTL 64 (195)
Q Consensus 47 ~~i~l~G~S~Gg~la~~~ 64 (195)
+...++|.|+|+.+....
T Consensus 113 ~G~v~~G~SAGA~~~~~~ 130 (210)
T cd03129 113 RGVVIGGTSAGAAVMGET 130 (210)
T ss_pred cCCeEEEcCHHHHHhhhc
Confidence 458999999999766543
No 369
>COG0376 KatG Catalase (peroxidase I) [Inorganic ion transport and metabolism]
Probab=21.46 E-value=1.4e+02 Score=25.87 Aligned_cols=45 Identities=20% Similarity=0.307 Sum_probs=31.7
Q ss_pred cCCCCCCCCC----CchHHHHHHHHHHHHHhccCCCCCCCCCCCCCCCceEEeeccch
Q 039671 4 EYGLFPDRPI----PACYEDSWAALNWVASHAGGNGPEPWLNDHADFGRVFIGGGSAG 57 (195)
Q Consensus 4 ~Yrlap~~~~----p~~~~D~~~a~~~l~~~~~~~~~~~~~~~~~d~~~i~l~G~S~G 57 (195)
.-||+|+..+ |+++.-+.++++-++++..+- +....++|.|..+|
T Consensus 492 RirLaPqkdWevN~P~~l~kvl~~le~iq~~fnkk---------vSlADlIVL~G~a~ 540 (730)
T COG0376 492 RIRLAPQKDWEVNQPAELAKVLAVLEKIQKEFNKK---------VSLADLIVLGGNAA 540 (730)
T ss_pred eEeecccccCCCCCHHHHHHHHHHHHHHHHHhcCc---------cchhHheeecchHH
Confidence 4589999754 678888888888888875432 45566777765543
No 370
>PF01339 CheB_methylest: CheB methylesterase; InterPro: IPR000673 Two-component signal transduction systems enable bacteria to sense, respond, and adapt to a wide range of environments, stressors, and growth conditions []. Some bacteria can contain up to as many as 200 two-component systems that need tight regulation to prevent unwanted cross-talk []. These pathways have been adapted to response to a wide variety of stimuli, including nutrients, cellular redox state, changes in osmolarity, quorum signals, antibiotics, and more []. Two-component systems are comprised of a sensor histidine kinase (HK) and its cognate response regulator (RR) []. The HK catalyses its own auto-phosphorylation followed by the transfer of the phosphoryl group to the receiver domain on RR; phosphorylation of the RR usually activates an attached output domain, which can then effect changes in cellular physiology, often by regulating gene expression. Some HK are bifunctional, catalysing both the phosphorylation and dephosphorylation of their cognate RR. The input stimuli can regulate either the kinase or phosphatase activity of the bifunctional HK. A variant of the two-component system is the phospho-relay system. Here a hybrid HK auto-phosphorylates and then transfers the phosphoryl group to an internal receiver domain, rather than to a separate RR protein. The phosphoryl group is then shuttled to histidine phosphotransferase (HPT) and subsequently to a terminal RR, which can evoke the desired response [, ]. This entry represents the signal transduction response regulator CheB involved in chemotaxis. CheB methylesterase is responsible for removing the methyl group from the gamma-glutamyl methyl ester residues in the methyl-accepting chemotaxis proteins (MCP). The enzyme catalyses the reaction: protein L-glutamate O-methyl ester and water is converted to protein L-glutamate and methanol. CheB is regulated through phosphorylation by CheA. The N-terminal region of the protein is similar to that of other regulatory components of sensory transduction systems. The Myxococcus xanthus FrzG protein also belongs to this family, and is required for the normal aggregation of cells during fruiting body formation.; GO: 0000156 two-component response regulator activity, 0008984 protein-glutamate methylesterase activity, 0000160 two-component signal transduction system (phosphorelay), 0006935 chemotaxis, 0005737 cytoplasm; PDB: 1CHD_A 1A2O_B 3SFT_A.
Probab=21.22 E-value=71 Score=23.10 Aligned_cols=19 Identities=37% Similarity=0.328 Sum_probs=13.4
Q ss_pred eEEeeccchHHHHHHHHHH
Q 039671 49 VFIGGGSAGGNIAHTLAFQ 67 (195)
Q Consensus 49 i~l~G~S~Gg~la~~~a~~ 67 (195)
|+++|.|+||--++.-...
T Consensus 1 vV~IGaSaGG~~al~~il~ 19 (182)
T PF01339_consen 1 VVAIGASAGGPEALQEILS 19 (182)
T ss_dssp EEEEEE-TTHHHHHCCCHC
T ss_pred CEEEEeCCCCHHHHHHHHH
Confidence 5789999999888744443
No 371
>cd00860 ThrRS_anticodon ThrRS Threonyl-anticodon binding domain. ThrRS belongs to class II aminoacyl-tRNA synthetases (aaRS). This alignment contains the anticodon binding domain, which is responsible for specificity in tRNA-binding, so that the activated amino acid is transferred to a ribose 3' OH group of the appropriate tRNA only.
Probab=21.13 E-value=2e+02 Score=17.24 Aligned_cols=25 Identities=20% Similarity=0.018 Sum_probs=17.1
Q ss_pred CccchhhHHHHHHHHHhcCCCccEEEE
Q 039671 136 KDFLKPVAMNYYEDLKKSGWKGTVELV 162 (195)
Q Consensus 136 ~D~l~~~~~~~~~~l~~~~~g~~~~~~ 162 (195)
.+.....+..+++.|++. |..+++.
T Consensus 10 ~~~~~~~a~~~~~~Lr~~--g~~v~~d 34 (91)
T cd00860 10 TDEHLDYAKEVAKKLSDA--GIRVEVD 34 (91)
T ss_pred CchHHHHHHHHHHHHHHC--CCEEEEE
Confidence 344556788888888888 5666553
No 372
>KOG1643 consensus Triosephosphate isomerase [Carbohydrate transport and metabolism]
Probab=20.99 E-value=1e+02 Score=23.00 Aligned_cols=48 Identities=23% Similarity=0.361 Sum_probs=29.8
Q ss_pred CCCCchHHHHHHHHH-HHHHhccCCCCCCCCCCCCCCCceEEeeccchHHHHHHHHHH
Q 039671 11 RPIPACYEDSWAALN-WVASHAGGNGPEPWLNDHADFGRVFIGGGSAGGNIAHTLAFQ 67 (195)
Q Consensus 11 ~~~p~~~~D~~~a~~-~l~~~~~~~~~~~~~~~~~d~~~i~l~G~S~Gg~la~~~a~~ 67 (195)
..-|+|.+++.+.++ |+.++.... +...--+|.|.|.-|.-+..++-+
T Consensus 174 ~atp~QaqEVh~~iR~wl~~~vs~~---------Va~~~RIiYGGSV~g~N~~el~~~ 222 (247)
T KOG1643|consen 174 TATPEQAQEVHAEIRKWLKSNVSDA---------VASSTRIIYGGSVNGGNCKELAKK 222 (247)
T ss_pred CCCHHHHHHHHHHHHHHHhhcchhh---------hhhceEEEeccccccccHHHhccc
Confidence 345788888888775 666653322 223334577888777666666554
No 373
>TIGR02690 resist_ArsH arsenical resistance protein ArsH. Members of this protein family occur in arsenate resistance operons that include at least two different types of arsenate reductase. ArsH is not required for arsenate resistance in some systems. This family belongs to the larger family of NADPH-dependent FMN reductases (Pfam model pfam03358). The function of ArsH is not known.
Probab=20.96 E-value=1.6e+02 Score=22.12 Aligned_cols=15 Identities=20% Similarity=0.138 Sum_probs=10.5
Q ss_pred CCCCceEEeeccchHH
Q 039671 44 ADFGRVFIGGGSAGGN 59 (195)
Q Consensus 44 ~d~~~i~l~G~S~Gg~ 59 (195)
...+.++|+|.| ||.
T Consensus 126 ~~~KpvaivgaS-gg~ 140 (219)
T TIGR02690 126 TQGKTLAVMQVS-GGS 140 (219)
T ss_pred cCCCcEEEEEeC-CcH
Confidence 345678999988 443
No 374
>PRK10673 acyl-CoA esterase; Provisional
Probab=20.93 E-value=3.4e+02 Score=19.82 Aligned_cols=60 Identities=7% Similarity=0.061 Sum_probs=30.4
Q ss_pred CCEEEEEcCCccchhhHHHHHHHHHhcCCCccEEEEEecCCCccccccCCCchHHHHHHHHHHHHHH
Q 039671 127 ERVLIFVAEKDFLKPVAMNYYEDLKKSGWKGTVELVETHGEGHSFYFDNLKCEKAVELINKFVSFIT 193 (195)
Q Consensus 127 pp~~i~~g~~D~l~~~~~~~~~~l~~~~~g~~~~~~~~~g~~H~f~~~~~~~~~~~~~~~~~~~fl~ 193 (195)
||++++||....... -..+...|.+. ++++.++--+||........ ...+..+++..+++
T Consensus 17 ~~iv~lhG~~~~~~~-~~~~~~~l~~~-----~~vi~~D~~G~G~s~~~~~~-~~~~~~~d~~~~l~ 76 (255)
T PRK10673 17 SPIVLVHGLFGSLDN-LGVLARDLVND-----HDIIQVDMRNHGLSPRDPVM-NYPAMAQDLLDTLD 76 (255)
T ss_pred CCEEEECCCCCchhH-HHHHHHHHhhC-----CeEEEECCCCCCCCCCCCCC-CHHHHHHHHHHHHH
Confidence 689999997654321 12233444332 35555555557644322211 22445555655554
No 375
>PF10516 SHNi-TPR: SHNi-TPR; InterPro: IPR019544 The tetratrico peptide repeat region (TPR) is a structural motif present in a wide range of proteins [, , ]. It mediates protein-protein interactions and the assembly of multiprotein complexes []. The TPR motif consists of 3-16 tandem-repeats of 34 amino acids residues, although individual TPR motifs can be dispersed in the protein sequence. Sequence alignment of the TPR domains reveals a consensus sequence defined by a pattern of small and large amino acids. TPR motifs have been identified in various different organisms, ranging from bacteria to humans. Proteins containing TPRs are involved in a variety of biological processes, such as cell cycle regulation, transcriptional control, mitochondrial and peroxisomal protein transport, neurogenesis and protein folding. The X-ray structure of a domain containing three TPRs from protein phosphatase 5 revealed that TPR adopts a helix-turn-helix arrangement, with adjacent TPR motifs packing in a parallel fashion, resulting in a spiral of repeating anti-parallel alpha-helices []. The two helices are denoted helix A and helix B. The packing angle between helix A and helix B is ~24 degrees within a single TPR and generates a right-handed superhelical shape. Helix A interacts with helix B and with helix A' of the next TPR. Two protein surfaces are generated: the inner concave surface is contributed to mainly by residue on helices A, and the other surface presents residues from both helices A and B. This entry represents SHNi-TPR (Sim3-Hif1-NASP interrupted TPR), a sequence that is an interrupted form of TPR repeat [].
Probab=20.88 E-value=84 Score=16.30 Aligned_cols=20 Identities=20% Similarity=0.063 Sum_probs=17.2
Q ss_pred CCCCchHHHHHHHHHHHHHh
Q 039671 11 RPIPACYEDSWAALNWVASH 30 (195)
Q Consensus 11 ~~~p~~~~D~~~a~~~l~~~ 30 (195)
..|+.+++|...++++..+.
T Consensus 15 e~f~qA~~D~~~aL~i~~~l 34 (38)
T PF10516_consen 15 ENFEQAIEDYEKALEIQEEL 34 (38)
T ss_pred ccHHHHHHHHHHHHHHHHHh
Confidence 46899999999999987765
No 376
>TIGR03230 lipo_lipase lipoprotein lipase. Members of this protein family are lipoprotein lipase (EC 3.1.1.34), a eukaryotic triacylglycerol lipase active in plasma and similar to pancreatic and hepatic triacylglycerol lipases (EC 3.1.1.3). It is also called clearing factor. It cleaves chylomicron and VLDL triacylglycerols; it also has phospholipase A-1 activity.
Probab=20.49 E-value=5.3e+02 Score=21.80 Aligned_cols=43 Identities=7% Similarity=-0.066 Sum_probs=23.0
Q ss_pred CCCEEEEEcCCccc--hhhHHHHHHHHHhcCCCccEEEEEecCCC
Q 039671 126 CERVLIFVAEKDFL--KPVAMNYYEDLKKSGWKGTVELVETHGEG 168 (195)
Q Consensus 126 ~pp~~i~~g~~D~l--~~~~~~~~~~l~~~~~g~~~~~~~~~g~~ 168 (195)
-|+++++||-.+.- ......+.+.|.......++-...+++.+
T Consensus 41 ~ptvIlIHG~~~s~~~~~w~~~l~~al~~~~~d~nVI~VDw~g~g 85 (442)
T TIGR03230 41 TKTFIVIHGWTVTGMFESWVPKLVAALYEREPSANVIVVDWLSRA 85 (442)
T ss_pred CCeEEEECCCCcCCcchhhHHHHHHHHHhccCCCEEEEEECCCcC
Confidence 46899999976532 23455566665433102344444455433
No 377
>PLN02752 [acyl-carrier protein] S-malonyltransferase
Probab=20.41 E-value=73 Score=25.46 Aligned_cols=17 Identities=29% Similarity=0.124 Sum_probs=14.2
Q ss_pred EEeeccchHHHHHHHHH
Q 039671 50 FIGGGSAGGNIAHTLAF 66 (195)
Q Consensus 50 ~l~G~S~Gg~la~~~a~ 66 (195)
+++|||.|=+-|+.++.
T Consensus 127 ~~~GHSlGE~aA~~~AG 143 (343)
T PLN02752 127 VCAGLSLGEYTALVFAG 143 (343)
T ss_pred eeeeccHHHHHHHHHhC
Confidence 68999999988877663
No 378
>TIGR01485 SPP_plant-cyano sucrose-6F-phosphate phosphohydrolase. Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.
Probab=20.29 E-value=1.2e+02 Score=22.74 Aligned_cols=24 Identities=17% Similarity=0.339 Sum_probs=17.2
Q ss_pred HHHHHHHHhccCCCCCCCCCCCCCCCceEEeeccc
Q 039671 22 AALNWVASHAGGNGPEPWLNDHADFGRVFIGGGSA 56 (195)
Q Consensus 22 ~a~~~l~~~~~~~~~~~~~~~~~d~~~i~l~G~S~ 56 (195)
.+++++.+... ++.++++.+|+|.
T Consensus 170 ~al~~l~~~~~-----------i~~~~~i~~GD~~ 193 (249)
T TIGR01485 170 QALQYLLQKLA-----------MEPSQTLVCGDSG 193 (249)
T ss_pred HHHHHHHHHcC-----------CCccCEEEEECCh
Confidence 45666666532 6788999999995
Done!