BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 039681
(624 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 197 bits (500), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 112/295 (37%), Positives = 177/295 (60%), Gaps = 10/295 (3%)
Query: 320 FTGKEIRRATNNFSKDNLIGTGGFGEVFKGILDDGTVTAIKRAKLGNTKGTDLVLN-EVR 378
F+ +E++ A++NFS N++G GGFG+V+KG L DGT+ A+KR K +G +L EV
Sbjct: 28 FSLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERXQGGELQFQTEVE 87
Query: 379 ILCQVNHRSLVRLLGCCVELDQTLMIYEYIPNGTLFDHLHCDFTGKWPPLPWHLRLVIAH 438
++ HR+L+RL G C+ + L++Y Y+ NG++ L + PPL W R IA
Sbjct: 88 MISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLR-ERPESQPPLDWPKRQRIAL 146
Query: 439 QIAEGLTYLHSAAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDSHIFTTA 498
A GL YLH P I HRDVK++NILLDE+ A V DFGL++L+ + D H+
Sbjct: 147 GSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLM---DYKDXHVXXAV 203
Query: 499 QGTMGYLDPEYYRNFQLTDKSDVYSFGVVLLELLTSKKAIDFNR--EEENVNLVVYMKKI 556
+GT+G++ PEY + ++K+DV+ +GV+LLEL+T ++A D R +++V L+ ++K +
Sbjct: 204 RGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGL 263
Query: 557 MDEERLMEVVDPVLKERATHLDLETMKALGLLAASCLDERRQNRPSMKEVADEIE 611
+ E++L +VD L+ ++E + + LL C RP M EV +E
Sbjct: 264 LKEKKLEALVDVDLQGNYKDEEVEQLIQVALL---CTQSSPMERPKMSEVVRMLE 315
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 196 bits (499), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 118/300 (39%), Positives = 177/300 (59%), Gaps = 13/300 (4%)
Query: 324 EIRRATNNFSKDNLIGTGGFGEVFKGILDDGTVTAIKRAKLGNTKGTDLVLNEVRILCQV 383
++ ATNNF LIG G FG+V+KG+L DG A+KR +++G + E+ L
Sbjct: 33 DLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIETLSFC 92
Query: 384 NHRSLVRLLGCCVELDQTLMIYEYIPNGTLFDHLHCDFTGKWP--PLPWHLRLVIAHQIA 441
H LV L+G C E ++ ++IY+Y+ NG L HL + P + W RL I A
Sbjct: 93 RHPHLVSLIGFCDERNEMILIYKYMENGNLKRHL---YGSDLPTMSMSWEQRLEICIGAA 149
Query: 442 EGLTYLHSAAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDSHIFTTAQGT 501
GL YLH+ A I HRDVKS NILLDE K++DFG+S+ + TE + +H+ +GT
Sbjct: 150 RGLHYLHTRA---IIHRDVKSINILLDENFVPKITDFGISK--KGTELDQTHLXXVVKGT 204
Query: 502 MGYLDPEYYRNFQLTDKSDVYSFGVVLLELLTSKKAIDFNREEENVNLVVYMKKIMDEER 561
+GY+DPEY+ +LT+KSDVYSFGVVL E+L ++ AI + E VNL + + + +
Sbjct: 205 LGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVESHNNGQ 264
Query: 562 LMEVVDPVLKERATHLDLETMKALGLLAASCLDERRQNRPSMKEVADEIEYIISIAKGRI 621
L ++VDP L ++ + E+++ G A CL ++RPSM +V ++EY + + + I
Sbjct: 265 LEQIVDPNLADK---IRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKLEYALRLQESVI 321
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 196 bits (498), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 118/300 (39%), Positives = 176/300 (58%), Gaps = 13/300 (4%)
Query: 324 EIRRATNNFSKDNLIGTGGFGEVFKGILDDGTVTAIKRAKLGNTKGTDLVLNEVRILCQV 383
++ ATNNF LIG G FG+V+KG+L DG A+KR +++G + E+ L
Sbjct: 33 DLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIETLSFC 92
Query: 384 NHRSLVRLLGCCVELDQTLMIYEYIPNGTLFDHLHCDFTGKWP--PLPWHLRLVIAHQIA 441
H LV L+G C E ++ ++IY+Y+ NG L HL + P + W RL I A
Sbjct: 93 RHPHLVSLIGFCDERNEMILIYKYMENGNLKRHL---YGSDLPTMSMSWEQRLEICIGAA 149
Query: 442 EGLTYLHSAAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDSHIFTTAQGT 501
GL YLH+ A I HRDVKS NILLDE K++DFG+S+ + TE +H+ +GT
Sbjct: 150 RGLHYLHTRA---IIHRDVKSINILLDENFVPKITDFGISK--KGTELGQTHLXXVVKGT 204
Query: 502 MGYLDPEYYRNFQLTDKSDVYSFGVVLLELLTSKKAIDFNREEENVNLVVYMKKIMDEER 561
+GY+DPEY+ +LT+KSDVYSFGVVL E+L ++ AI + E VNL + + + +
Sbjct: 205 LGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVESHNNGQ 264
Query: 562 LMEVVDPVLKERATHLDLETMKALGLLAASCLDERRQNRPSMKEVADEIEYIISIAKGRI 621
L ++VDP L ++ + E+++ G A CL ++RPSM +V ++EY + + + I
Sbjct: 265 LEQIVDPNLADK---IRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKLEYALRLQESVI 321
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 193 bits (490), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 110/295 (37%), Positives = 175/295 (59%), Gaps = 10/295 (3%)
Query: 320 FTGKEIRRATNNFSKDNLIGTGGFGEVFKGILDDGTVTAIKRAKLGNTKGTDLVLN-EVR 378
F+ +E++ A++NF N++G GGFG+V+KG L DG + A+KR K T+G +L EV
Sbjct: 20 FSLRELQVASDNFXNKNILGRGGFGKVYKGRLADGXLVAVKRLKEERTQGGELQFQTEVE 79
Query: 379 ILCQVNHRSLVRLLGCCVELDQTLMIYEYIPNGTLFDHLHCDFTGKWPPLPWHLRLVIAH 438
++ HR+L+RL G C+ + L++Y Y+ NG++ L + PPL W R IA
Sbjct: 80 MISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLR-ERPESQPPLDWPKRQRIAL 138
Query: 439 QIAEGLTYLHSAAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDSHIFTTA 498
A GL YLH P I HRDVK++NILLDE+ A V DFGL++L+ + D H+
Sbjct: 139 GSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLM---DYKDXHVXXAV 195
Query: 499 QGTMGYLDPEYYRNFQLTDKSDVYSFGVVLLELLTSKKAIDFNR--EEENVNLVVYMKKI 556
+G +G++ PEY + ++K+DV+ +GV+LLEL+T ++A D R +++V L+ ++K +
Sbjct: 196 RGXIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGL 255
Query: 557 MDEERLMEVVDPVLKERATHLDLETMKALGLLAASCLDERRQNRPSMKEVADEIE 611
+ E++L +VD L+ ++E + + LL C RP M EV +E
Sbjct: 256 LKEKKLEALVDVDLQGNYKDEEVEQLIQVALL---CTQSSPMERPKMSEVVRMLE 307
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 171 bits (433), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 106/297 (35%), Positives = 168/297 (56%), Gaps = 24/297 (8%)
Query: 320 FTGKEIRRATNNFSK------DNLIGTGGFGEVFKGILDDGTVTAIKRAKLGNTKGTDL- 372
F+ E++ TNNF + N +G GGFG V+KG +++ TV K A + + +L
Sbjct: 15 FSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNNTTVAVKKLAAMVDITTEELK 74
Query: 373 --VLNEVRILCQVNHRSLVRLLGCCVELDQTLMIYEYIPNGTLFDHLHC-DFTGKWPPLP 429
E++++ + H +LV LLG + D ++Y Y+PNG+L D L C D T PPL
Sbjct: 75 QQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGT---PPLS 131
Query: 430 WHLRLVIAHQIAEGLTYLHSAAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVERTET 489
WH+R IA A G+ +LH HRD+KS+NILLDE AK+SDFGL+R E+
Sbjct: 132 WHMRCKIAQGAANGINFLHE---NHHIHRDIKSANILLDEAFTAKISDFGLARASEKFA- 187
Query: 490 NDSHIFTTAQGTMGYLDPEYYRNFQLTDKSDVYSFGVVLLELLTSKKAIDFNREEENVNL 549
+ + + GT Y+ PE R ++T KSD+YSFGVVLLE++T A+D +RE +
Sbjct: 188 -QTVMXSRIVGTTAYMAPEALRG-EITPKSDIYSFGVVLLEIITGLPAVDEHREPQ---- 241
Query: 550 VVYMKKIMDEERLMEVVDPVLKERATHLDLETMKALGLLAASCLDERRQNRPSMKEV 606
+ + + E + ++ + ++ D +++A+ +A+ CL E++ RP +K+V
Sbjct: 242 -LLLDIKEEIEDEEKTIEDYIDKKMNDADSTSVEAMYSVASQCLHEKKNKRPDIKKV 297
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 170 bits (431), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 106/297 (35%), Positives = 167/297 (56%), Gaps = 24/297 (8%)
Query: 320 FTGKEIRRATNNFSK------DNLIGTGGFGEVFKGILDDGTVTAIKRAKLGNTKGTDL- 372
F+ E++ TNNF + N +G GGFG V+KG +++ TV K A + + +L
Sbjct: 15 FSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNNTTVAVKKLAAMVDITTEELK 74
Query: 373 --VLNEVRILCQVNHRSLVRLLGCCVELDQTLMIYEYIPNGTLFDHLHC-DFTGKWPPLP 429
E++++ + H +LV LLG + D ++Y Y+PNG+L D L C D T PPL
Sbjct: 75 QQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGT---PPLS 131
Query: 430 WHLRLVIAHQIAEGLTYLHSAAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVERTET 489
WH+R IA A G+ +LH HRD+KS+NILLDE AK+SDFGL+R E+
Sbjct: 132 WHMRCKIAQGAANGINFLHE---NHHIHRDIKSANILLDEAFTAKISDFGLARASEKFA- 187
Query: 490 NDSHIFTTAQGTMGYLDPEYYRNFQLTDKSDVYSFGVVLLELLTSKKAIDFNREEENVNL 549
+ + GT Y+ PE R ++T KSD+YSFGVVLLE++T A+D +RE +
Sbjct: 188 -QTVMXXRIVGTTAYMAPEALRG-EITPKSDIYSFGVVLLEIITGLPAVDEHREPQ---- 241
Query: 550 VVYMKKIMDEERLMEVVDPVLKERATHLDLETMKALGLLAASCLDERRQNRPSMKEV 606
+ + + E + ++ + ++ D +++A+ +A+ CL E++ RP +K+V
Sbjct: 242 -LLLDIKEEIEDEEKTIEDYIDKKMNDADSTSVEAMYSVASQCLHEKKNKRPDIKKV 297
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 170 bits (430), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 104/296 (35%), Positives = 164/296 (55%), Gaps = 22/296 (7%)
Query: 320 FTGKEIRRATNNFSK------DNLIGTGGFGEVFKGILDDGTVTAIKRAKLGNTKGTDL- 372
F+ E++ TNNF + N +G GGFG V+KG +++ TV K A + + +L
Sbjct: 9 FSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNNTTVAVKKLAAMVDITTEELK 68
Query: 373 --VLNEVRILCQVNHRSLVRLLGCCVELDQTLMIYEYIPNGTLFDHLHCDFTGKWPPLPW 430
E++++ + H +LV LLG + D ++Y Y+PNG+L D L C PPL W
Sbjct: 69 QQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSC--LDGTPPLSW 126
Query: 431 HLRLVIAHQIAEGLTYLHSAAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVERTETN 490
H+R IA A G+ +LH HRD+KS+NILLDE AK+SDFGL+R E+
Sbjct: 127 HMRCKIAQGAANGINFLHE---NHHIHRDIKSANILLDEAFTAKISDFGLARASEKFA-- 181
Query: 491 DSHIFTTAQGTMGYLDPEYYRNFQLTDKSDVYSFGVVLLELLTSKKAIDFNREEENVNLV 550
+ GT Y+ PE R ++T KSD+YSFGVVLLE++T A+D +RE +
Sbjct: 182 QXVMXXRIVGTTAYMAPEALRG-EITPKSDIYSFGVVLLEIITGLPAVDEHREPQ----- 235
Query: 551 VYMKKIMDEERLMEVVDPVLKERATHLDLETMKALGLLAASCLDERRQNRPSMKEV 606
+ + + E + ++ + ++ D +++A+ +A+ CL E++ RP +K+V
Sbjct: 236 LLLDIKEEIEDEEKTIEDYIDKKMNDADSTSVEAMYSVASQCLHEKKNKRPDIKKV 291
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 163 bits (413), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 108/299 (36%), Positives = 161/299 (53%), Gaps = 28/299 (9%)
Query: 320 FTGKEIRRATNNFSK------DNLIGTGGFGEVFKGILDDGTVTAIKRAKLGNTKGTDL- 372
F+ E++ TNNF + N G GGFG V+KG +++ TV K A + + +L
Sbjct: 6 FSFYELKNVTNNFDERPISVGGNKXGEGGFGVVYKGYVNNTTVAVKKLAAMVDITTEELK 65
Query: 373 --VLNEVRILCQVNHRSLVRLLGCCVELDQTLMIYEYIPNGTLFDHLHC-DFTGKWPPLP 429
E+++ + H +LV LLG + D ++Y Y PNG+L D L C D T PPL
Sbjct: 66 QQFDQEIKVXAKCQHENLVELLGFSSDGDDLCLVYVYXPNGSLLDRLSCLDGT---PPLS 122
Query: 430 WHLRLVIAHQIAEGLTYLHSAAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVER--T 487
WH R IA A G+ +LH HRD+KS+NILLDE AK+SDFGL+R E+
Sbjct: 123 WHXRCKIAQGAANGINFLHE---NHHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQ 179
Query: 488 ETNDSHIFTTAQGTMGYLDPEYYRNFQLTDKSDVYSFGVVLLELLTSKKAIDFNREEENV 547
S I GT Y PE R ++T KSD+YSFGVVLLE++T A+D +RE +
Sbjct: 180 XVXXSRIV----GTTAYXAPEALRG-EITPKSDIYSFGVVLLEIITGLPAVDEHREPQ-- 232
Query: 548 NLVVYMKKIMDEERLMEVVDPVLKERATHLDLETMKALGLLAASCLDERRQNRPSMKEV 606
+ + + E + ++ + ++ D +++A +A+ CL E++ RP +K+V
Sbjct: 233 ---LLLDIKEEIEDEEKTIEDYIDKKXNDADSTSVEAXYSVASQCLHEKKNKRPDIKKV 288
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 111 bits (278), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 71/200 (35%), Positives = 109/200 (54%), Gaps = 8/200 (4%)
Query: 338 IGTGGFGEVFKGILDDGTVTA-IKRAKLGNTKGTDLVLNEVRILCQVNHRSLVRLLGCCV 396
IG G FG V + V I + + + + L EV I+ ++ H ++V +G
Sbjct: 45 IGAGSFGTVHRAEWHGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAVT 104
Query: 397 ELDQTLMIYEYIPNGTLFDHLHCDFTGKWPPLPWHLRLVIAHQIAEGLTYLHSAAVPPIY 456
+ ++ EY+ G+L+ LH +G L RL +A+ +A+G+ YLH+ PPI
Sbjct: 105 QPPNLSIVTEYLSRGSLYRLLHK--SGAREQLDERRRLSMAYDVAKGMNYLHNRN-PPIV 161
Query: 457 HRDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDSHIFTTAQGTMGYLDPEYYRNFQLT 516
HR++KS N+L+D+K KV DFGLSRL T + +A GT ++ PE R+
Sbjct: 162 HRNLKSPNLLVDKKYTVKVCDFGLSRLKASTFLSSK----SAAGTPEWMAPEVLRDEPSN 217
Query: 517 DKSDVYSFGVVLLELLTSKK 536
+KSDVYSFGV+L EL T ++
Sbjct: 218 EKSDVYSFGVILWELATLQQ 237
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 72/201 (35%), Positives = 111/201 (55%), Gaps = 10/201 (4%)
Query: 338 IGTGGFGEVFKGILDDGTVTAIK--RAKLGNTKGTDLVLNEVRILCQVNHRSLVRLLGCC 395
IG G FG V + G+ A+K + + + + L EV I+ ++ H ++V +G
Sbjct: 45 IGAGSFGTVHRAEWH-GSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAV 103
Query: 396 VELDQTLMIYEYIPNGTLFDHLHCDFTGKWPPLPWHLRLVIAHQIAEGLTYLHSAAVPPI 455
+ ++ EY+ G+L+ LH +G L RL +A+ +A+G+ YLH+ PPI
Sbjct: 104 TQPPNLSIVTEYLSRGSLYRLLHK--SGAREQLDERRRLSMAYDVAKGMNYLHNRN-PPI 160
Query: 456 YHRDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDSHIFTTAQGTMGYLDPEYYRNFQL 515
HRD+KS N+L+D+K KV DFGLSRL + + A GT ++ PE R+
Sbjct: 161 VHRDLKSPNLLVDKKYTVKVCDFGLSRL----KASXFLXSKXAAGTPEWMAPEVLRDEPS 216
Query: 516 TDKSDVYSFGVVLLELLTSKK 536
+KSDVYSFGV+L EL T ++
Sbjct: 217 NEKSDVYSFGVILWELATLQQ 237
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 106 bits (265), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 75/203 (36%), Positives = 112/203 (55%), Gaps = 19/203 (9%)
Query: 338 IGTGGFGEVFKGILDDGTVTAIKRAKLGNTKGTDLVLNEVRILCQVNHRSLVRLLGCCVE 397
+G G FGEV+ G + T AIK K G T + L E +++ ++ H LV+L E
Sbjct: 19 LGQGCFGEVWMGTWNGTTRVAIKTLKPG-TMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE 77
Query: 398 LDQTLMIYEYIPNGTLFDHLHCDFTGKWPPLPWHLRLV-IAHQIAEGLTYLHSAAVPPIY 456
+ ++ EY+ G+L D L + TGK+ LP +LV +A QIA G+ Y+
Sbjct: 78 -EPIYIVTEYMSKGSLLDFLKGE-TGKYLRLP---QLVDMAAQIASGMAYVERMNY---V 129
Query: 457 HRDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDSHIFTTAQGT---MGYLDPEYYRNF 513
HRD++++NIL+ E L KV+DFGL+RL+E E +T QG + + PE
Sbjct: 130 HRDLRAANILVGENLVCKVADFGLARLIEDNE------YTARQGAKFPIKWTAPEAALYG 183
Query: 514 QLTDKSDVYSFGVVLLELLTSKK 536
+ T KSDV+SFG++L EL T +
Sbjct: 184 RFTIKSDVWSFGILLTELTTKGR 206
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 106 bits (264), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 75/203 (36%), Positives = 112/203 (55%), Gaps = 19/203 (9%)
Query: 338 IGTGGFGEVFKGILDDGTVTAIKRAKLGNTKGTDLVLNEVRILCQVNHRSLVRLLGCCVE 397
+G G FGEV+ G + T AIK K G T + L E +++ ++ H LV+L E
Sbjct: 275 LGQGCFGEVWMGTWNGTTRVAIKTLKPG-TMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE 333
Query: 398 LDQTLMIYEYIPNGTLFDHLHCDFTGKWPPLPWHLRLV-IAHQIAEGLTYLHSAAVPPIY 456
+ ++ EY+ G+L D L + TGK+ LP +LV +A QIA G+ Y+
Sbjct: 334 -EPIYIVTEYMSKGSLLDFLKGE-TGKYLRLP---QLVDMAAQIASGMAYVERMN---YV 385
Query: 457 HRDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDSHIFTTAQGT---MGYLDPEYYRNF 513
HRD++++NIL+ E L KV+DFGL+RL+E E +T QG + + PE
Sbjct: 386 HRDLRAANILVGENLVCKVADFGLARLIEDNE------YTARQGAKFPIKWTAPEAALYG 439
Query: 514 QLTDKSDVYSFGVVLLELLTSKK 536
+ T KSDV+SFG++L EL T +
Sbjct: 440 RFTIKSDVWSFGILLTELTTKGR 462
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 106 bits (264), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 75/203 (36%), Positives = 112/203 (55%), Gaps = 19/203 (9%)
Query: 338 IGTGGFGEVFKGILDDGTVTAIKRAKLGNTKGTDLVLNEVRILCQVNHRSLVRLLGCCVE 397
+G G FGEV+ G + T AIK K G T + L E +++ ++ H LV+L E
Sbjct: 192 LGQGCFGEVWMGTWNGTTRVAIKTLKPG-TMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE 250
Query: 398 LDQTLMIYEYIPNGTLFDHLHCDFTGKWPPLPWHLRLV-IAHQIAEGLTYLHSAAVPPIY 456
+ ++ EY+ G+L D L + TGK+ LP +LV +A QIA G+ Y+
Sbjct: 251 -EPIYIVTEYMSKGSLLDFLKGE-TGKYLRLP---QLVDMAAQIASGMAYVERMN---YV 302
Query: 457 HRDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDSHIFTTAQGT---MGYLDPEYYRNF 513
HRD++++NIL+ E L KV+DFGL+RL+E E +T QG + + PE
Sbjct: 303 HRDLRAANILVGENLVCKVADFGLARLIEDNE------YTARQGAKFPIKWTAPEAALYG 356
Query: 514 QLTDKSDVYSFGVVLLELLTSKK 536
+ T KSDV+SFG++L EL T +
Sbjct: 357 RFTIKSDVWSFGILLTELTTKGR 379
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 106 bits (264), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 75/203 (36%), Positives = 112/203 (55%), Gaps = 19/203 (9%)
Query: 338 IGTGGFGEVFKGILDDGTVTAIKRAKLGNTKGTDLVLNEVRILCQVNHRSLVRLLGCCVE 397
+G G FGEV+ G + T AIK K G T + L E +++ ++ H LV+L E
Sbjct: 192 LGQGCFGEVWMGTWNGTTRVAIKTLKPG-TMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE 250
Query: 398 LDQTLMIYEYIPNGTLFDHLHCDFTGKWPPLPWHLRLV-IAHQIAEGLTYLHSAAVPPIY 456
+ ++ EY+ G+L D L + TGK+ LP +LV +A QIA G+ Y+
Sbjct: 251 -EPIYIVTEYMSKGSLLDFLKGE-TGKYLRLP---QLVDMAAQIASGMAYVERMN---YV 302
Query: 457 HRDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDSHIFTTAQGT---MGYLDPEYYRNF 513
HRD++++NIL+ E L KV+DFGL+RL+E E +T QG + + PE
Sbjct: 303 HRDLRAANILVGENLVCKVADFGLARLIEDNE------YTARQGAKFPIKWTAPEAALYG 356
Query: 514 QLTDKSDVYSFGVVLLELLTSKK 536
+ T KSDV+SFG++L EL T +
Sbjct: 357 RFTIKSDVWSFGILLTELTTKGR 379
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 105 bits (263), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 73/200 (36%), Positives = 110/200 (55%), Gaps = 13/200 (6%)
Query: 338 IGTGGFGEVFKGILDDGTVTAIKRAKLGNTKGTDLVLNEVRILCQVNHRSLVRLLGCCVE 397
+G G FGEV+ G + T AIK K G T + L E +++ ++ H LV+L E
Sbjct: 16 LGQGCFGEVWMGTWNGTTRVAIKTLKPG-TMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE 74
Query: 398 LDQTLMIYEYIPNGTLFDHLHCDFTGKWPPLPWHLRLV-IAHQIAEGLTYLHSAAVPPIY 456
+ ++ EY+ G+L D L + TGK+ LP +LV +A QIA G+ Y+
Sbjct: 75 -EPIXIVTEYMSKGSLLDFLKGE-TGKYLRLP---QLVDMAAQIASGMAYVERMN---YV 126
Query: 457 HRDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDSHIFTTAQGTMGYLDPEYYRNFQLT 516
HRD++++NIL+ E L KV+DFGL+RL+E E A+ + + PE + T
Sbjct: 127 HRDLRAANILVGENLVCKVADFGLARLIEDNEXTARQ---GAKFPIKWTAPEAALYGRFT 183
Query: 517 DKSDVYSFGVVLLELLTSKK 536
KSDV+SFG++L EL T +
Sbjct: 184 IKSDVWSFGILLTELTTKGR 203
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 105 bits (263), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 75/203 (36%), Positives = 112/203 (55%), Gaps = 19/203 (9%)
Query: 338 IGTGGFGEVFKGILDDGTVTAIKRAKLGNTKGTDLVLNEVRILCQVNHRSLVRLLGCCVE 397
+G G FGEV+ G + T AIK K G T + L E +++ ++ H LV+L E
Sbjct: 192 LGQGCFGEVWMGTWNGTTRVAIKTLKPG-TMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE 250
Query: 398 LDQTLMIYEYIPNGTLFDHLHCDFTGKWPPLPWHLRLV-IAHQIAEGLTYLHSAAVPPIY 456
+ ++ EY+ G+L D L + TGK+ LP +LV +A QIA G+ Y+
Sbjct: 251 -EPIYIVGEYMSKGSLLDFLKGE-TGKYLRLP---QLVDMAAQIASGMAYVERMN---YV 302
Query: 457 HRDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDSHIFTTAQGT---MGYLDPEYYRNF 513
HRD++++NIL+ E L KV+DFGL+RL+E E +T QG + + PE
Sbjct: 303 HRDLRAANILVGENLVCKVADFGLARLIEDNE------YTARQGAKFPIKWTAPEAALYG 356
Query: 514 QLTDKSDVYSFGVVLLELLTSKK 536
+ T KSDV+SFG++L EL T +
Sbjct: 357 RFTIKSDVWSFGILLTELTTKGR 379
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 105 bits (262), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 74/203 (36%), Positives = 111/203 (54%), Gaps = 19/203 (9%)
Query: 338 IGTGGFGEVFKGILDDGTVTAIKRAKLGNTKGTDLVLNEVRILCQVNHRSLVRLLGCCVE 397
+G G FGEV+ G + T AIK K G T + L E +++ ++ H LV+L E
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPG-TMSPEAFLQEAQVMKKIRHEKLVQLYAVVSE 84
Query: 398 LDQTLMIYEYIPNGTLFDHLHCDFTGKWPPLPWHLRLV-IAHQIAEGLTYLHSAAVPPIY 456
+ ++ EY+ G+L D L + GK+ LP +LV +A QIA G+ Y+
Sbjct: 85 -EPIYIVTEYMSKGSLLDFLKGEM-GKYLRLP---QLVDMAAQIASGMAYVERMNY---V 136
Query: 457 HRDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDSHIFTTAQGT---MGYLDPEYYRNF 513
HRD++++NIL+ E L KV+DFGL+RL+E E +T QG + + PE
Sbjct: 137 HRDLRAANILVGENLVCKVADFGLARLIEDNE------YTARQGAKFPIKWTAPEAALYG 190
Query: 514 QLTDKSDVYSFGVVLLELLTSKK 536
+ T KSDV+SFG++L EL T +
Sbjct: 191 RFTIKSDVWSFGILLTELTTKGR 213
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 105 bits (262), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 70/203 (34%), Positives = 107/203 (52%), Gaps = 18/203 (8%)
Query: 338 IGTGGFGEVFKGILDDGTVTAIKRAKLGNTKGTDLVLNEVRILCQVNHRSLVRLLGCCVE 397
+G G FGEV+ G ++ T A+K K G T L E ++ + H LVRL
Sbjct: 21 LGAGQFGEVWMGYYNNSTKVAVKTLKPG-TMSVQAFLEEANLMKTLQHDKLVRLYAVVTR 79
Query: 398 LDQTLMIYEYIPNGTLFDHLHCDFTGKWPPLPWHLRLV-IAHQIAEGLTYLHSAAVPPIY 456
+ +I EY+ G+L D L D GK LP +L+ + QIAEG+ Y+
Sbjct: 80 EEPIYIITEYMAKGSLLDFLKSDEGGK-VLLP---KLIDFSAQIAEGMAYIERKNY---I 132
Query: 457 HRDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDSHIFTTAQGT---MGYLDPEYYRNF 513
HRD++++N+L+ E L K++DFGL+R++E E +T +G + + PE
Sbjct: 133 HRDLRAANVLVSESLMCKIADFGLARVIEDNE------YTAREGAKFPIKWTAPEAINFG 186
Query: 514 QLTDKSDVYSFGVVLLELLTSKK 536
T KSDV+SFG++L E++T K
Sbjct: 187 CFTIKSDVWSFGILLYEIVTYGK 209
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 74/203 (36%), Positives = 111/203 (54%), Gaps = 19/203 (9%)
Query: 338 IGTGGFGEVFKGILDDGTVTAIKRAKLGNTKGTDLVLNEVRILCQVNHRSLVRLLGCCVE 397
+G G FGEV+ G + T AIK K G T + L E +++ ++ H LV+L E
Sbjct: 15 LGQGCFGEVWMGTWNGTTRVAIKTLKPG-TMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE 73
Query: 398 LDQTLMIYEYIPNGTLFDHLHCDFTGKWPPLPWHLRLV-IAHQIAEGLTYLHSAAVPPIY 456
+ ++ EY+ G+L D L + GK+ LP +LV +A QIA G+ Y+
Sbjct: 74 -EPIYIVTEYMSKGSLLDFLKGEM-GKYLRLP---QLVDMAAQIASGMAYVERMNY---V 125
Query: 457 HRDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDSHIFTTAQGT---MGYLDPEYYRNF 513
HRD++++NIL+ E L KV+DFGL+RL+E E +T QG + + PE
Sbjct: 126 HRDLRAANILVGENLVCKVADFGLARLIEDNE------YTARQGAKFPIKWTAPEAALYG 179
Query: 514 QLTDKSDVYSFGVVLLELLTSKK 536
+ T KSDV+SFG++L EL T +
Sbjct: 180 RFTIKSDVWSFGILLTELTTKGR 202
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 74/203 (36%), Positives = 112/203 (55%), Gaps = 19/203 (9%)
Query: 338 IGTGGFGEVFKGILDDGTVTAIKRAKLGNTKGTDLVLNEVRILCQVNHRSLVRLLGCCVE 397
+G G FGEV+ G + T AIK K G T + L E +++ ++ H LV+L E
Sbjct: 23 LGQGCFGEVWMGTWNGTTRVAIKTLKPG-TMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE 81
Query: 398 LDQTLMIYEYIPNGTLFDHLHCDFTGKWPPLPWHLRLV-IAHQIAEGLTYLHSAAVPPIY 456
+ ++ EY+ G+L D L + TGK+ LP +LV ++ QIA G+ Y+
Sbjct: 82 -EPIYIVTEYMNKGSLLDFLKGE-TGKYLRLP---QLVDMSAQIASGMAYVERMN---YV 133
Query: 457 HRDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDSHIFTTAQGT---MGYLDPEYYRNF 513
HRD++++NIL+ E L KV+DFGL+RL+E E +T QG + + PE
Sbjct: 134 HRDLRAANILVGENLVCKVADFGLARLIEDNE------YTARQGAKFPIKWTAPEAALYG 187
Query: 514 QLTDKSDVYSFGVVLLELLTSKK 536
+ T KSDV+SFG++L EL T +
Sbjct: 188 RFTIKSDVWSFGILLTELTTKGR 210
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 74/203 (36%), Positives = 111/203 (54%), Gaps = 19/203 (9%)
Query: 338 IGTGGFGEVFKGILDDGTVTAIKRAKLGNTKGTDLVLNEVRILCQVNHRSLVRLLGCCVE 397
+G G FGEV+ G + T AIK K G T + L E +++ ++ H LV+L E
Sbjct: 17 LGQGCFGEVWMGTWNGTTRVAIKTLKPG-TMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE 75
Query: 398 LDQTLMIYEYIPNGTLFDHLHCDFTGKWPPLPWHLRLV-IAHQIAEGLTYLHSAAVPPIY 456
+ ++ EY+ G+L D L + GK+ LP +LV +A QIA G+ Y+
Sbjct: 76 -EPIYIVTEYMSKGSLLDFLKGEM-GKYLRLP---QLVDMAAQIASGMAYVERMNY---V 127
Query: 457 HRDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDSHIFTTAQGT---MGYLDPEYYRNF 513
HRD++++NIL+ E L KV+DFGL+RL+E E +T QG + + PE
Sbjct: 128 HRDLRAANILVGENLVCKVADFGLARLIEDNE------YTARQGAKFPIKWTAPEAALYG 181
Query: 514 QLTDKSDVYSFGVVLLELLTSKK 536
+ T KSDV+SFG++L EL T +
Sbjct: 182 RFTIKSDVWSFGILLTELTTKGR 204
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 74/203 (36%), Positives = 111/203 (54%), Gaps = 19/203 (9%)
Query: 338 IGTGGFGEVFKGILDDGTVTAIKRAKLGNTKGTDLVLNEVRILCQVNHRSLVRLLGCCVE 397
+G G FGEV+ G + T AIK K G T + L E +++ ++ H LV+L E
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPG-TMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE 84
Query: 398 LDQTLMIYEYIPNGTLFDHLHCDFTGKWPPLPWHLRLV-IAHQIAEGLTYLHSAAVPPIY 456
+ ++ EY+ G+L D L + GK+ LP +LV +A QIA G+ Y+
Sbjct: 85 -EPIYIVTEYMSKGSLLDFLKGEM-GKYLRLP---QLVDMAAQIASGMAYVERMNY---V 136
Query: 457 HRDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDSHIFTTAQGT---MGYLDPEYYRNF 513
HRD++++NIL+ E L KV+DFGL+RL+E E +T QG + + PE
Sbjct: 137 HRDLRAANILVGENLVCKVADFGLARLIEDNE------YTARQGAKFPIKWTAPEAALYG 190
Query: 514 QLTDKSDVYSFGVVLLELLTSKK 536
+ T KSDV+SFG++L EL T +
Sbjct: 191 RFTIKSDVWSFGILLTELTTKGR 213
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 74/203 (36%), Positives = 111/203 (54%), Gaps = 19/203 (9%)
Query: 338 IGTGGFGEVFKGILDDGTVTAIKRAKLGNTKGTDLVLNEVRILCQVNHRSLVRLLGCCVE 397
+G G FGEV+ G + T AIK K G T + L E +++ ++ H LV+L E
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPG-TMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE 84
Query: 398 LDQTLMIYEYIPNGTLFDHLHCDFTGKWPPLPWHLRLV-IAHQIAEGLTYLHSAAVPPIY 456
+ ++ EY+ G+L D L + GK+ LP +LV +A QIA G+ Y+
Sbjct: 85 -EPIYIVIEYMSKGSLLDFLKGEM-GKYLRLP---QLVDMAAQIASGMAYVERMNY---V 136
Query: 457 HRDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDSHIFTTAQGT---MGYLDPEYYRNF 513
HRD++++NIL+ E L KV+DFGL+RL+E E +T QG + + PE
Sbjct: 137 HRDLRAANILVGENLVCKVADFGLARLIEDNE------YTARQGAKFPIKWTAPEAALYG 190
Query: 514 QLTDKSDVYSFGVVLLELLTSKK 536
+ T KSDV+SFG++L EL T +
Sbjct: 191 RFTIKSDVWSFGILLTELTTKGR 213
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 74/203 (36%), Positives = 112/203 (55%), Gaps = 19/203 (9%)
Query: 338 IGTGGFGEVFKGILDDGTVTAIKRAKLGNTKGTDLVLNEVRILCQVNHRSLVRLLGCCVE 397
+G G FGEV+ G + T AIK K G T + L E +++ ++ H LV+L E
Sbjct: 23 LGQGCFGEVWMGTWNGTTRVAIKTLKPG-TMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE 81
Query: 398 LDQTLMIYEYIPNGTLFDHLHCDFTGKWPPLPWHLRLV-IAHQIAEGLTYLHSAAVPPIY 456
+ ++ EY+ G+L D L + TGK+ LP +LV ++ QIA G+ Y+
Sbjct: 82 -EPIYIVTEYMNKGSLLDFLKGE-TGKYLRLP---QLVDMSAQIASGMAYVERMN---YV 133
Query: 457 HRDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDSHIFTTAQGT---MGYLDPEYYRNF 513
HRD++++NIL+ E L KV+DFGL+RL+E E +T QG + + PE
Sbjct: 134 HRDLRAANILVGENLVCKVADFGLARLIEDNE------WTARQGAKFPIKWTAPEAALYG 187
Query: 514 QLTDKSDVYSFGVVLLELLTSKK 536
+ T KSDV+SFG++L EL T +
Sbjct: 188 RFTIKSDVWSFGILLTELTTKGR 210
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 68/199 (34%), Positives = 107/199 (53%), Gaps = 11/199 (5%)
Query: 338 IGTGGFGEVFKGILDDGTVTAIKRAKLGNTKGTDLVLNEVRILCQVNHRSLVRLLGCCVE 397
+G G FGEV+ G + T A+K K G+ D L E ++ Q+ H+ LVRL +
Sbjct: 30 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSM-SPDAFLAEANLMKQLQHQRLVRLYAVVTQ 88
Query: 398 LDQTLMIYEYIPNGTLFDHLHCDFTGKWPPLPWHLRLVIAHQIAEGLTYLHSAAVPPIYH 457
+ +I EY+ NG+L D L K L + L +A QIAEG+ ++ H
Sbjct: 89 -EPIYIITEYMENGSLVDFLKTPSGIK---LTINKLLDMAAQIAEGMAFIEERNY---IH 141
Query: 458 RDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDSHIFTTAQGTMGYLDPEYYRNFQLTD 517
RD++++NIL+ + L+ K++DFGL+RL+E E A+ + + PE T
Sbjct: 142 RDLRAANILVSDTLSCKIADFGLARLIEDNEXTARE---GAKFPIKWTAPEAINYGTFTI 198
Query: 518 KSDVYSFGVVLLELLTSKK 536
KSDV+SFG++L E++T +
Sbjct: 199 KSDVWSFGILLTEIVTHGR 217
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 68/196 (34%), Positives = 106/196 (54%), Gaps = 11/196 (5%)
Query: 338 IGTGGFGEVFKGILDDGTVTAIKRAKLGNTKGTDLVLNEVRILCQVNHRSLVRLLGCCVE 397
+G G FGEV+ G + T A+K K G+ D L E ++ Q+ H+ LVRL +
Sbjct: 29 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSM-SPDAFLAEANLMKQLQHQRLVRLYAVVTQ 87
Query: 398 LDQTLMIYEYIPNGTLFDHLHCDFTGKWPPLPWHLRLVIAHQIAEGLTYLHSAAVPPIYH 457
+ +I EY+ NG+L D L K L + L +A QIAEG+ ++ H
Sbjct: 88 -EPIYIITEYMENGSLVDFLKTPSGIK---LTINKLLDMAAQIAEGMAFIEERNY---IH 140
Query: 458 RDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDSHIFTTAQGTMGYLDPEYYRNFQLTD 517
RD++++NIL+ + L+ K++DFGL+RL+E E A+ + + PE T
Sbjct: 141 RDLRAANILVSDTLSCKIADFGLARLIEDNEXTARE---GAKFPIKWTAPEAINYGTFTI 197
Query: 518 KSDVYSFGVVLLELLT 533
KSDV+SFG++L E++T
Sbjct: 198 KSDVWSFGILLTEIVT 213
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 68/196 (34%), Positives = 106/196 (54%), Gaps = 11/196 (5%)
Query: 338 IGTGGFGEVFKGILDDGTVTAIKRAKLGNTKGTDLVLNEVRILCQVNHRSLVRLLGCCVE 397
+G G FGEV+ G + T A+K K G+ D L E ++ Q+ H+ LVRL +
Sbjct: 27 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSM-SPDAFLAEANLMKQLQHQRLVRLYAVVTQ 85
Query: 398 LDQTLMIYEYIPNGTLFDHLHCDFTGKWPPLPWHLRLVIAHQIAEGLTYLHSAAVPPIYH 457
+ +I EY+ NG+L D L K L + L +A QIAEG+ ++ H
Sbjct: 86 -EPIYIITEYMENGSLVDFLKTPSGIK---LTINKLLDMAAQIAEGMAFIEERNY---IH 138
Query: 458 RDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDSHIFTTAQGTMGYLDPEYYRNFQLTD 517
RD++++NIL+ + L+ K++DFGL+RL+E E A+ + + PE T
Sbjct: 139 RDLRAANILVSDTLSCKIADFGLARLIEDNEXTARE---GAKFPIKWTAPEAINYGTFTI 195
Query: 518 KSDVYSFGVVLLELLT 533
KSDV+SFG++L E++T
Sbjct: 196 KSDVWSFGILLTEIVT 211
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 74/203 (36%), Positives = 110/203 (54%), Gaps = 19/203 (9%)
Query: 338 IGTGGFGEVFKGILDDGTVTAIKRAKLGNTKGTDLVLNEVRILCQVNHRSLVRLLGCCVE 397
+G G FGEV+ G + T AIK K GN + L E +++ ++ H LV+L E
Sbjct: 193 LGQGCFGEVWMGTWNGTTRVAIKTLKPGNMS-PEAFLQEAQVMKKLRHEKLVQLYAVVSE 251
Query: 398 LDQTLMIYEYIPNGTLFDHLHCDFTGKWPPLPWHLRLV-IAHQIAEGLTYLHSAAVPPIY 456
+ ++ EY+ G+L D L + GK+ LP +LV +A QIA G+ Y+
Sbjct: 252 -EPIYIVTEYMSKGSLLDFLKGEM-GKYLRLP---QLVDMAAQIASGMAYVERMN---YV 303
Query: 457 HRDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDSHIFTTAQGT---MGYLDPEYYRNF 513
HRD++++NIL+ E L KV+DFGL RL+E E +T QG + + PE
Sbjct: 304 HRDLRAANILVGENLVCKVADFGLGRLIEDNE------YTARQGAKFPIKWTAPEAALYG 357
Query: 514 QLTDKSDVYSFGVVLLELLTSKK 536
+ T KSDV+SFG++L EL T +
Sbjct: 358 RFTIKSDVWSFGILLTELTTKGR 380
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 68/199 (34%), Positives = 107/199 (53%), Gaps = 11/199 (5%)
Query: 338 IGTGGFGEVFKGILDDGTVTAIKRAKLGNTKGTDLVLNEVRILCQVNHRSLVRLLGCCVE 397
+G G FGEV+ G + T A+K K G+ D L E ++ Q+ H+ LVRL +
Sbjct: 21 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSM-SPDAFLAEANLMKQLQHQRLVRLYAVVTQ 79
Query: 398 LDQTLMIYEYIPNGTLFDHLHCDFTGKWPPLPWHLRLVIAHQIAEGLTYLHSAAVPPIYH 457
+ +I EY+ NG+L D L K L + L +A QIAEG+ ++ H
Sbjct: 80 -EPIYIITEYMENGSLVDFLKTPSGIK---LTINKLLDMAAQIAEGMAFIEERNY---IH 132
Query: 458 RDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDSHIFTTAQGTMGYLDPEYYRNFQLTD 517
RD++++NIL+ + L+ K++DFGL+RL+E E A+ + + PE T
Sbjct: 133 RDLRAANILVSDTLSCKIADFGLARLIEDNEXTARE---GAKFPIKWTAPEAINYGTFTI 189
Query: 518 KSDVYSFGVVLLELLTSKK 536
KSDV+SFG++L E++T +
Sbjct: 190 KSDVWSFGILLTEIVTHGR 208
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 82/283 (28%), Positives = 135/283 (47%), Gaps = 35/283 (12%)
Query: 338 IGTGGFGEVFKGILDDGTVTAIKRAKLGNTKGTDLVLNEVRILCQVNHRSLVRLLGCCVE 397
IG+G FG V+KG + + NEV +L + H +++ +G +
Sbjct: 16 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTK 75
Query: 398 LDQTLMIYEYIPNGTLFDHLHCDFTGKWPPLPWHLRLV-IAHQIAEGLTYLHSAAVPPIY 456
Q ++ ++ +L+ HLH T K+ ++L+ IA Q A+G+ YLH+ + I
Sbjct: 76 -PQLAIVTQWCEGSSLYHHLHIIET-KFE----MIKLIDIARQTAQGMDYLHAKS---II 126
Query: 457 HRDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDSHIFTTAQGTMGYLDPEYYRNFQLT 516
HRD+KS+NI L E L K+ DFGL+ E++ + SH F G++ ++ PE R +
Sbjct: 127 HRDLKSNNIFLHEDLTVKIGDFGLA--TEKSRWSGSHQFEQLSGSILWMAPEVIR---MQ 181
Query: 517 DK------SDVYSFGVVLLELLTSKKAIDFNREEENVNLVVYMKKIMDEERLMEVVDPVL 570
DK SDVY+FG+VL EL+T + N + +++M V L
Sbjct: 182 DKNPYSFQSDVYAFGIVLYELMTGQLPYS---NINNRDQIIFM-----------VGRGYL 227
Query: 571 KERATHLDLETMKALGLLAASCLDERRQNRPSMKEVADEIEYI 613
+ + KA+ L A CL ++R RP ++ IE +
Sbjct: 228 SPDLSKVRSNCPKAMKRLMAECLKKKRDERPLFPQILASIELL 270
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 69/199 (34%), Positives = 108/199 (54%), Gaps = 17/199 (8%)
Query: 338 IGTGGFGEVFKGILDDGTVTAIKRAKLGNTKGTDLVLNEVRILCQVNHRSLVRLLGCCVE 397
+G G FGEV+ G + T A+K K G+ D L E ++ Q+ H+ LVRL +
Sbjct: 26 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSM-SPDAFLAEANLMKQLQHQRLVRLYAVVTQ 84
Query: 398 LDQTLMIYEYIPNGTLFDHLHCDFTGKWPPLPWHLRLVIAHQIAEGLTYLHSAAVPPIYH 457
+ +I EY+ NG+L D L K L + L +A QIAEG+ ++ H
Sbjct: 85 -EPIYIITEYMENGSLVDFLKTPSGIK---LTINKLLDMAAQIAEGMAFIEERNY---IH 137
Query: 458 RDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDSHIFTTAQGT---MGYLDPEYYRNFQ 514
RD++++NIL+ + L+ K++DFGL+RL+E E +T +G + + PE
Sbjct: 138 RDLRAANILVSDTLSCKIADFGLARLIEDNE------YTAREGAKFPIKWTAPEAINYGT 191
Query: 515 LTDKSDVYSFGVVLLELLT 533
T KSDV+SFG++L E++T
Sbjct: 192 FTIKSDVWSFGILLTEIVT 210
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 74/203 (36%), Positives = 111/203 (54%), Gaps = 19/203 (9%)
Query: 338 IGTGGFGEVFKGILDDGTVTAIKRAKLGNTKGTDLVLNEVRILCQVNHRSLVRLLGCCVE 397
+G G FGEV+ G + T AIK K G T + L E +++ ++ H LV+L E
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPG-TMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE 84
Query: 398 LDQTLMIYEYIPNGTLFDHLHCDFTGKWPPLPWHLRLV-IAHQIAEGLTYLHSAAVPPIY 456
+ ++ EY+ G+L D L + GK+ LP +LV +A QIA G+ Y+
Sbjct: 85 -EPIYIVCEYMSKGSLLDFLKGEM-GKYLRLP---QLVDMAAQIASGMAYVERMNY---V 136
Query: 457 HRDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDSHIFTTAQGT---MGYLDPEYYRNF 513
HRD++++NIL+ E L KV+DFGL+RL+E E +T QG + + PE
Sbjct: 137 HRDLRAANILVGENLVCKVADFGLARLIEDNE------YTARQGAKFPIKWTAPEAALYG 190
Query: 514 QLTDKSDVYSFGVVLLELLTSKK 536
+ T KSDV+SFG++L EL T +
Sbjct: 191 RFTIKSDVWSFGILLTELTTKGR 213
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 69/202 (34%), Positives = 109/202 (53%), Gaps = 17/202 (8%)
Query: 338 IGTGGFGEVFKGILDDGTVTAIKRAKLGNTKGTDLVLNEVRILCQVNHRSLVRLLGCCVE 397
+G G FGEV+ G + T A+K K G+ D L E ++ Q+ H+ LVRL +
Sbjct: 31 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSM-SPDAFLAEANLMKQLQHQRLVRLYAVVTQ 89
Query: 398 LDQTLMIYEYIPNGTLFDHLHCDFTGKWPPLPWHLRLVIAHQIAEGLTYLHSAAVPPIYH 457
+ +I EY+ NG+L D L K L + L +A QIAEG+ ++ H
Sbjct: 90 -EPIYIITEYMENGSLVDFLKTPSGIK---LTINKLLDMAAQIAEGMAFIEERNY---IH 142
Query: 458 RDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDSHIFTTAQGT---MGYLDPEYYRNFQ 514
RD++++NIL+ + L+ K++DFGL+RL+E E +T +G + + PE
Sbjct: 143 RDLRAANILVSDTLSCKIADFGLARLIEDNE------YTAREGAKFPIKWTAPEAINYGT 196
Query: 515 LTDKSDVYSFGVVLLELLTSKK 536
T KSDV+SFG++L E++T +
Sbjct: 197 FTIKSDVWSFGILLTEIVTHGR 218
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 69/199 (34%), Positives = 108/199 (54%), Gaps = 17/199 (8%)
Query: 338 IGTGGFGEVFKGILDDGTVTAIKRAKLGNTKGTDLVLNEVRILCQVNHRSLVRLLGCCVE 397
+G G FGEV+ G + T A+K K G+ D L E ++ Q+ H+ LVRL +
Sbjct: 27 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSM-SPDAFLAEANLMKQLQHQRLVRLYAVVTQ 85
Query: 398 LDQTLMIYEYIPNGTLFDHLHCDFTGKWPPLPWHLRLVIAHQIAEGLTYLHSAAVPPIYH 457
+ +I EY+ NG+L D L K L + L +A QIAEG+ ++ H
Sbjct: 86 -EPIYIITEYMENGSLVDFLKTPSGIK---LTINKLLDMAAQIAEGMAFIEERNY---IH 138
Query: 458 RDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDSHIFTTAQGT---MGYLDPEYYRNFQ 514
RD++++NIL+ + L+ K++DFGL+RL+E E +T +G + + PE
Sbjct: 139 RDLRAANILVSDTLSCKIADFGLARLIEDNE------YTAREGAKFPIKWTAPEAINYGT 192
Query: 515 LTDKSDVYSFGVVLLELLT 533
T KSDV+SFG++L E++T
Sbjct: 193 FTIKSDVWSFGILLTEIVT 211
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 72/200 (36%), Positives = 109/200 (54%), Gaps = 13/200 (6%)
Query: 338 IGTGGFGEVFKGILDDGTVTAIKRAKLGNTKGTDLVLNEVRILCQVNHRSLVRLLGCCVE 397
+G G FGEV+ G + T AIK K G T + L E +++ ++ H LV+L E
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPG-TMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE 84
Query: 398 LDQTLMIYEYIPNGTLFDHLHCDFTGKWPPLPWHLRLV-IAHQIAEGLTYLHSAAVPPIY 456
+ ++ EY+ G+L D L + GK+ LP +LV +A QIA G+ Y+
Sbjct: 85 -EPIYIVIEYMSKGSLLDFLKGEM-GKYLRLP---QLVDMAAQIASGMAYVERMNY---V 136
Query: 457 HRDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDSHIFTTAQGTMGYLDPEYYRNFQLT 516
HRD++++NIL+ E L KV+DFGL+RL+E E A+ + + PE + T
Sbjct: 137 HRDLRAANILVGENLVCKVADFGLARLIEDNEXTARQ---GAKFPIKWTAPEAALYGRFT 193
Query: 517 DKSDVYSFGVVLLELLTSKK 536
KSDV+SFG++L EL T +
Sbjct: 194 IKSDVWSFGILLTELTTKGR 213
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 74/203 (36%), Positives = 110/203 (54%), Gaps = 19/203 (9%)
Query: 338 IGTGGFGEVFKGILDDGTVTAIKRAKLGNTKGTDLVLNEVRILCQVNHRSLVRLLGCCVE 397
+G G FGEV+ G + T AIK K G T + L E +++ ++ H LV+L E
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPG-TMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE 84
Query: 398 LDQTLMIYEYIPNGTLFDHLHCDFTGKWPPLPWHLRLV-IAHQIAEGLTYLHSAAVPPIY 456
+ ++ EY+ G L D L + GK+ LP +LV +A QIA G+ Y+
Sbjct: 85 -EPIYIVMEYMSKGCLLDFLKGEM-GKYLRLP---QLVDMAAQIASGMAYVERMN---YV 136
Query: 457 HRDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDSHIFTTAQGT---MGYLDPEYYRNF 513
HRD++++NIL+ E L KV+DFGL+RL+E E +T QG + + PE
Sbjct: 137 HRDLRAANILVGENLVCKVADFGLARLIEDNE------YTARQGAKFPIKWTAPEAALYG 190
Query: 514 QLTDKSDVYSFGVVLLELLTSKK 536
+ T KSDV+SFG++L EL T +
Sbjct: 191 RFTIKSDVWSFGILLTELTTKGR 213
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 74/203 (36%), Positives = 110/203 (54%), Gaps = 19/203 (9%)
Query: 338 IGTGGFGEVFKGILDDGTVTAIKRAKLGNTKGTDLVLNEVRILCQVNHRSLVRLLGCCVE 397
+G G FGEV+ G + T AIK K G T + L E +++ ++ H LV+L E
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPG-TMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE 84
Query: 398 LDQTLMIYEYIPNGTLFDHLHCDFTGKWPPLPWHLRLV-IAHQIAEGLTYLHSAAVPPIY 456
+ ++ EY+ G+L D L + GK+ LP +LV +A QIA G+ Y+
Sbjct: 85 -EPIYIVTEYMSKGSLLDFLKGEM-GKYLRLP---QLVDMAAQIASGMAYVERMN---YV 136
Query: 457 HRDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDSHIFTTAQGT---MGYLDPEYYRNF 513
HRD+ ++NIL+ E L KV+DFGL+RL+E E +T QG + + PE
Sbjct: 137 HRDLAAANILVGENLVCKVADFGLARLIEDNE------YTARQGAKFPIKWTAPEAALYG 190
Query: 514 QLTDKSDVYSFGVVLLELLTSKK 536
+ T KSDV+SFG++L EL T +
Sbjct: 191 RFTIKSDVWSFGILLTELTTKGR 213
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 69/202 (34%), Positives = 109/202 (53%), Gaps = 17/202 (8%)
Query: 338 IGTGGFGEVFKGILDDGTVTAIKRAKLGNTKGTDLVLNEVRILCQVNHRSLVRLLGCCVE 397
+G G FGEV+ G + T A+K K G+ D L E ++ Q+ H+ LVRL +
Sbjct: 21 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSM-SPDAFLAEANLMKQLQHQRLVRLYAVVTQ 79
Query: 398 LDQTLMIYEYIPNGTLFDHLHCDFTGKWPPLPWHLRLVIAHQIAEGLTYLHSAAVPPIYH 457
+ +I EY+ NG+L D L K L + L +A QIAEG+ ++ H
Sbjct: 80 -EPIYIITEYMENGSLVDFLKTPSGIK---LTINKLLDMAAQIAEGMAFIEERNY---IH 132
Query: 458 RDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDSHIFTTAQGT---MGYLDPEYYRNFQ 514
RD++++NIL+ + L+ K++DFGL+RL+E E +T +G + + PE
Sbjct: 133 RDLRAANILVSDTLSCKIADFGLARLIEDNE------YTAREGAKFPIKWTAPEAINYGT 186
Query: 515 LTDKSDVYSFGVVLLELLTSKK 536
T KSDV+SFG++L E++T +
Sbjct: 187 FTIKSDVWSFGILLTEIVTHGR 208
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 68/199 (34%), Positives = 107/199 (53%), Gaps = 11/199 (5%)
Query: 338 IGTGGFGEVFKGILDDGTVTAIKRAKLGNTKGTDLVLNEVRILCQVNHRSLVRLLGCCVE 397
+G G FGEV+ G + T A+K K G+ D L E ++ Q+ H+ LVRL +
Sbjct: 23 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSM-SPDAFLAEANLMKQLQHQRLVRLYAVVTQ 81
Query: 398 LDQTLMIYEYIPNGTLFDHLHCDFTGKWPPLPWHLRLVIAHQIAEGLTYLHSAAVPPIYH 457
+ +I EY+ NG+L D L K L + L +A QIAEG+ ++ H
Sbjct: 82 -EPIYIITEYMENGSLVDFLKTPSGIK---LTINKLLDMAAQIAEGMAFIEERNY---IH 134
Query: 458 RDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDSHIFTTAQGTMGYLDPEYYRNFQLTD 517
RD++++NIL+ + L+ K++DFGL+RL+E E A+ + + PE T
Sbjct: 135 RDLRAANILVSDTLSCKIADFGLARLIEDNEXTARE---GAKFPIKWTAPEAINYGTFTI 191
Query: 518 KSDVYSFGVVLLELLTSKK 536
KSDV+SFG++L E++T +
Sbjct: 192 KSDVWSFGILLTEIVTHGR 210
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 81/282 (28%), Positives = 131/282 (46%), Gaps = 37/282 (13%)
Query: 338 IGTGGFGEVFKGILDDGTVTAIKRAKLGNTKGTDLVLNEVRILCQVNHRSLVRLLGCCVE 397
IG+G FG V+KG + + NEV +L + H +++ +G +
Sbjct: 32 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTK 91
Query: 398 LDQTLMIYEYIPNGTLFDHLHCDFTGKWPPLPWHLRLVIAHQIAEGLTYLHSAAVPPIYH 457
Q ++ ++ +L+ HLH T + IA Q A G+ YLH+ + I H
Sbjct: 92 -PQLAIVTQWCEGSSLYHHLHASET----KFEMKKLIDIARQTARGMDYLHAKS---IIH 143
Query: 458 RDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDSHIFTTAQGTMGYLDPEYYR------ 511
RD+KS+NI L E K+ DFGL+ E++ + SH F G++ ++ PE R
Sbjct: 144 RDLKSNNIFLHEDNTVKIGDFGLA--TEKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNP 201
Query: 512 -NFQLTDKSDVYSFGVVLLELLTSKKAIDFNREEENVNLVVYMKKIMDEERLMEVVD-PV 569
+FQ SDVY+FG+VL EL+T + N+N + ++++E+V
Sbjct: 202 YSFQ----SDVYAFGIVLYELMTGQLPYS------NIN---------NRDQIIEMVGRGS 242
Query: 570 LKERATHLDLETMKALGLLAASCLDERRQNRPSMKEVADEIE 611
L + + K + L A CL ++R RPS + EIE
Sbjct: 243 LSPDLSKVRSNCPKRMKRLMAECLKKKRDERPSFPRILAEIE 284
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 103 bits (257), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 82/283 (28%), Positives = 135/283 (47%), Gaps = 35/283 (12%)
Query: 338 IGTGGFGEVFKGILDDGTVTAIKRAKLGNTKGTDLVLNEVRILCQVNHRSLVRLLGCCVE 397
IG+G FG V+KG + + NEV +L + H +++ +G +
Sbjct: 36 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTK 95
Query: 398 LDQTLMIYEYIPNGTLFDHLHCDFTGKWPPLPWHLRLV-IAHQIAEGLTYLHSAAVPPIY 456
Q ++ ++ +L+ HLH T K+ ++L+ IA Q A+G+ YLH+ + I
Sbjct: 96 -PQLAIVTQWCEGSSLYHHLHIIET-KFE----MIKLIDIARQTAQGMDYLHAKS---II 146
Query: 457 HRDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDSHIFTTAQGTMGYLDPEYYRNFQLT 516
HRD+KS+NI L E L K+ DFGL+ E++ + SH F G++ ++ PE R +
Sbjct: 147 HRDLKSNNIFLHEDLTVKIGDFGLA--TEKSRWSGSHQFEQLSGSILWMAPEVIR---MQ 201
Query: 517 DK------SDVYSFGVVLLELLTSKKAIDFNREEENVNLVVYMKKIMDEERLMEVVDPVL 570
DK SDVY+FG+VL EL+T + N + +++M V L
Sbjct: 202 DKNPYSFQSDVYAFGIVLYELMTGQLPYS---NINNRDQIIFM-----------VGRGYL 247
Query: 571 KERATHLDLETMKALGLLAASCLDERRQNRPSMKEVADEIEYI 613
+ + KA+ L A CL ++R RP ++ IE +
Sbjct: 248 SPDLSKVRSNCPKAMKRLMAECLKKKRDERPLFPQILASIELL 290
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 103 bits (257), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 68/196 (34%), Positives = 106/196 (54%), Gaps = 11/196 (5%)
Query: 338 IGTGGFGEVFKGILDDGTVTAIKRAKLGNTKGTDLVLNEVRILCQVNHRSLVRLLGCCVE 397
+G G FGEV+ G + T A+K K G+ D L E ++ Q+ H+ LVRL +
Sbjct: 22 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSM-SPDAFLAEANLMKQLQHQRLVRLYAVVTQ 80
Query: 398 LDQTLMIYEYIPNGTLFDHLHCDFTGKWPPLPWHLRLVIAHQIAEGLTYLHSAAVPPIYH 457
+ +I EY+ NG+L D L K L + L +A QIAEG+ ++ H
Sbjct: 81 -EPIYIITEYMENGSLVDFLKTPSGIK---LTINKLLDMAAQIAEGMAFIEERNY---IH 133
Query: 458 RDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDSHIFTTAQGTMGYLDPEYYRNFQLTD 517
RD++++NIL+ + L+ K++DFGL+RL+E E A+ + + PE T
Sbjct: 134 RDLRAANILVSDTLSCKIADFGLARLIEDNEXTARE---GAKFPIKWTAPEAINYGTFTI 190
Query: 518 KSDVYSFGVVLLELLT 533
KSDV+SFG++L E++T
Sbjct: 191 KSDVWSFGILLTEIVT 206
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 103 bits (257), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 82/283 (28%), Positives = 135/283 (47%), Gaps = 35/283 (12%)
Query: 338 IGTGGFGEVFKGILDDGTVTAIKRAKLGNTKGTDLVLNEVRILCQVNHRSLVRLLGCCVE 397
IG+G FG V+KG + + NEV +L + H +++ +G +
Sbjct: 44 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTK 103
Query: 398 LDQTLMIYEYIPNGTLFDHLHCDFTGKWPPLPWHLRLV-IAHQIAEGLTYLHSAAVPPIY 456
Q ++ ++ +L+ HLH T K+ ++L+ IA Q A+G+ YLH+ + I
Sbjct: 104 -PQLAIVTQWCEGSSLYHHLHIIET-KFE----MIKLIDIARQTAQGMDYLHAKS---II 154
Query: 457 HRDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDSHIFTTAQGTMGYLDPEYYRNFQLT 516
HRD+KS+NI L E L K+ DFGL+ E++ + SH F G++ ++ PE R +
Sbjct: 155 HRDLKSNNIFLHEDLTVKIGDFGLA--TEKSRWSGSHQFEQLSGSILWMAPEVIR---MQ 209
Query: 517 DK------SDVYSFGVVLLELLTSKKAIDFNREEENVNLVVYMKKIMDEERLMEVVDPVL 570
DK SDVY+FG+VL EL+T + N + +++M V L
Sbjct: 210 DKNPYSFQSDVYAFGIVLYELMTGQLPYS---NINNRDQIIFM-----------VGRGYL 255
Query: 571 KERATHLDLETMKALGLLAASCLDERRQNRPSMKEVADEIEYI 613
+ + KA+ L A CL ++R RP ++ IE +
Sbjct: 256 SPDLSKVRSNCPKAMKRLMAECLKKKRDERPLFPQILASIELL 298
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 103 bits (257), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 68/199 (34%), Positives = 107/199 (53%), Gaps = 11/199 (5%)
Query: 338 IGTGGFGEVFKGILDDGTVTAIKRAKLGNTKGTDLVLNEVRILCQVNHRSLVRLLGCCVE 397
+G G FGEV+ G + T A+K K G+ D L E ++ Q+ H+ LVRL +
Sbjct: 21 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSM-SPDAFLAEANLMKQLQHQRLVRLYAVVTQ 79
Query: 398 LDQTLMIYEYIPNGTLFDHLHCDFTGKWPPLPWHLRLVIAHQIAEGLTYLHSAAVPPIYH 457
+ +I EY+ NG+L D L K L + L +A QIAEG+ ++ H
Sbjct: 80 -EPIYIITEYMENGSLVDFLKTPSGIK---LTINKLLDMAAQIAEGMAFIEERNY---IH 132
Query: 458 RDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDSHIFTTAQGTMGYLDPEYYRNFQLTD 517
RD++++NIL+ + L+ K++DFGL+RL+E E A+ + + PE T
Sbjct: 133 RDLRAANILVSDTLSCKIADFGLARLIEDNEXTARE---GAKFPIKWTAPEAINYGTFTI 189
Query: 518 KSDVYSFGVVLLELLTSKK 536
KSDV+SFG++L E++T +
Sbjct: 190 KSDVWSFGILLTEIVTHGR 208
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 103 bits (257), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 74/203 (36%), Positives = 110/203 (54%), Gaps = 19/203 (9%)
Query: 338 IGTGGFGEVFKGILDDGTVTAIKRAKLGNTKGTDLVLNEVRILCQVNHRSLVRLLGCCVE 397
+G G FGEV+ G + T AIK K G T + L E +++ ++ H LV+L E
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPG-TMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE 84
Query: 398 LDQTLMIYEYIPNGTLFDHLHCDFTGKWPPLPWHLRLV-IAHQIAEGLTYLHSAAVPPIY 456
+ ++ EY+ G L D L + GK+ LP +LV +A QIA G+ Y+
Sbjct: 85 -EPIYIVTEYMSKGCLLDFLKGEM-GKYLRLP---QLVDMAAQIASGMAYVERMNY---V 136
Query: 457 HRDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDSHIFTTAQGT---MGYLDPEYYRNF 513
HRD++++NIL+ E L KV+DFGL+RL+E E +T QG + + PE
Sbjct: 137 HRDLRAANILVGENLVCKVADFGLARLIEDNE------YTARQGAKFPIKWTAPEAALYG 190
Query: 514 QLTDKSDVYSFGVVLLELLTSKK 536
+ T KSDV+SFG++L EL T +
Sbjct: 191 RFTIKSDVWSFGILLTELTTKGR 213
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 103 bits (257), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 69/202 (34%), Positives = 109/202 (53%), Gaps = 17/202 (8%)
Query: 338 IGTGGFGEVFKGILDDGTVTAIKRAKLGNTKGTDLVLNEVRILCQVNHRSLVRLLGCCVE 397
+G G FGEV+ G + T A+K K G+ D L E ++ Q+ H+ LVRL +
Sbjct: 16 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSM-SPDAFLAEANLMKQLQHQRLVRLYAVVTQ 74
Query: 398 LDQTLMIYEYIPNGTLFDHLHCDFTGKWPPLPWHLRLVIAHQIAEGLTYLHSAAVPPIYH 457
+ +I EY+ NG+L D L K L + L +A QIAEG+ ++ H
Sbjct: 75 -EPIYIITEYMENGSLVDFLKTPSGIK---LTINKLLDMAAQIAEGMAFIEERNY---IH 127
Query: 458 RDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDSHIFTTAQGT---MGYLDPEYYRNFQ 514
RD++++NIL+ + L+ K++DFGL+RL+E E +T +G + + PE
Sbjct: 128 RDLRAANILVSDTLSCKIADFGLARLIEDNE------YTAREGAKFPIKWTAPEAINYGT 181
Query: 515 LTDKSDVYSFGVVLLELLTSKK 536
T KSDV+SFG++L E++T +
Sbjct: 182 FTIKSDVWSFGILLTEIVTHGR 203
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 103 bits (256), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 81/282 (28%), Positives = 130/282 (46%), Gaps = 37/282 (13%)
Query: 338 IGTGGFGEVFKGILDDGTVTAIKRAKLGNTKGTDLVLNEVRILCQVNHRSLVRLLGCCVE 397
IG+G FG V+KG + + NEV +L + H +++ +G
Sbjct: 32 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTA 91
Query: 398 LDQTLMIYEYIPNGTLFDHLHCDFTGKWPPLPWHLRLVIAHQIAEGLTYLHSAAVPPIYH 457
Q ++ ++ +L+ HLH T + IA Q A G+ YLH+ + I H
Sbjct: 92 -PQLAIVTQWCEGSSLYHHLHASET----KFEMKKLIDIARQTARGMDYLHAKS---IIH 143
Query: 458 RDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDSHIFTTAQGTMGYLDPEYYR------ 511
RD+KS+NI L E K+ DFGL+ E++ + SH F G++ ++ PE R
Sbjct: 144 RDLKSNNIFLHEDNTVKIGDFGLA--TEKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNP 201
Query: 512 -NFQLTDKSDVYSFGVVLLELLTSKKAIDFNREEENVNLVVYMKKIMDEERLMEVVD-PV 569
+FQ SDVY+FG+VL EL+T + N+N + ++++E+V
Sbjct: 202 YSFQ----SDVYAFGIVLYELMTGQLPYS------NIN---------NRDQIIEMVGRGS 242
Query: 570 LKERATHLDLETMKALGLLAASCLDERRQNRPSMKEVADEIE 611
L + + K + L A CL ++R RPS + EIE
Sbjct: 243 LSPDLSKVRSNCPKRMKRLMAECLKKKRDERPSFPRILAEIE 284
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 102 bits (254), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 68/203 (33%), Positives = 108/203 (53%), Gaps = 18/203 (8%)
Query: 338 IGTGGFGEVFKGILDDGTVTAIKRAKLGNTKGTDLVLNEVRILCQVNHRSLVRLLGCCVE 397
+G G FGEV+ G ++ T A+K K G T L E ++ + H LVRL +
Sbjct: 20 LGAGQFGEVWMGYYNNSTKVAVKTLKPG-TMSVQAFLEEANLMKTLQHDKLVRLYAVVTK 78
Query: 398 LDQTLMIYEYIPNGTLFDHLHCDFTGKWPPLPWHLRLV-IAHQIAEGLTYLHSAAVPPIY 456
+ +I E++ G+L D L D GK LP +L+ + QIAEG+ Y+
Sbjct: 79 EEPIYIITEFMAKGSLLDFLKSDEGGK-VLLP---KLIDFSAQIAEGMAYIERKNY---I 131
Query: 457 HRDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDSHIFTTAQGT---MGYLDPEYYRNF 513
HRD++++N+L+ E L K++DFGL+R++E E +T +G + + PE
Sbjct: 132 HRDLRAANVLVSESLMCKIADFGLARVIEDNE------YTAREGAKFPIKWTAPEAINFG 185
Query: 514 QLTDKSDVYSFGVVLLELLTSKK 536
T KS+V+SFG++L E++T K
Sbjct: 186 CFTIKSNVWSFGILLYEIVTYGK 208
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 102 bits (254), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 70/212 (33%), Positives = 111/212 (52%), Gaps = 23/212 (10%)
Query: 335 DNLIGTGGFGEVFKG--ILDDGTVTAIKRAKLGNTKGT-DLVLNEVRILCQVNHRSLVRL 391
+ +IG GGFG+V++ I D+ V A + + T + V E ++ + H +++ L
Sbjct: 12 EEIIGIGGFGKVYRAFWIGDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIAL 71
Query: 392 LGCCVELDQTLMIYEYIPNGTLFDHLHCDFTGKWPPLPWHLRLVIAHQIAEGLTYLHSAA 451
G C++ ++ E+ G L L +GK +P + + A QIA G+ YLH A
Sbjct: 72 RGVCLKEPNLCLVMEFARGGPLNRVL----SGK--RIPPDILVNWAVQIARGMNYLHDEA 125
Query: 452 VPPIYHRDVKSSNILLDEKLN--------AKVSDFGLSRLVERTETNDSHIFTTAQGTMG 503
+ PI HRD+KSSNIL+ +K+ K++DFGL+R RT +A G
Sbjct: 126 IVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLAREWHRTTK------MSAAGAYA 179
Query: 504 YLDPEYYRNFQLTDKSDVYSFGVVLLELLTSK 535
++ PE R + SDV+S+GV+L ELLT +
Sbjct: 180 WMAPEVIRASMFSKGSDVWSYGVLLWELLTGE 211
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 102 bits (253), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 68/202 (33%), Positives = 109/202 (53%), Gaps = 17/202 (8%)
Query: 338 IGTGGFGEVFKGILDDGTVTAIKRAKLGNTKGTDLVLNEVRILCQVNHRSLVRLLGCCVE 397
+G G FGEV+ G + T A+K K G+ D L E ++ Q+ H+ LVRL +
Sbjct: 17 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSM-SPDAFLAEANLMKQLQHQRLVRLYAVVTQ 75
Query: 398 LDQTLMIYEYIPNGTLFDHLHCDFTGKWPPLPWHLRLVIAHQIAEGLTYLHSAAVPPIYH 457
+ +I EY+ NG+L D L K L + L +A QIAEG+ ++ H
Sbjct: 76 -EPIYIITEYMENGSLVDFLKTPSGIK---LTINKLLDMAAQIAEGMAFIEERNY---IH 128
Query: 458 RDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDSHIFTTAQGT---MGYLDPEYYRNFQ 514
R+++++NIL+ + L+ K++DFGL+RL+E E +T +G + + PE
Sbjct: 129 RNLRAANILVSDTLSCKIADFGLARLIEDNE------YTAREGAKFPIKWTAPEAINYGT 182
Query: 515 LTDKSDVYSFGVVLLELLTSKK 536
T KSDV+SFG++L E++T +
Sbjct: 183 FTIKSDVWSFGILLTEIVTHGR 204
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 102 bits (253), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 81/283 (28%), Positives = 135/283 (47%), Gaps = 35/283 (12%)
Query: 338 IGTGGFGEVFKGILDDGTVTAIKRAKLGNTKGTDLVLNEVRILCQVNHRSLVRLLGCCVE 397
IG+G FG V+KG + + NEV +L + H +++ +G +
Sbjct: 18 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTK 77
Query: 398 LDQTLMIYEYIPNGTLFDHLHCDFTGKWPPLPWHLRLV-IAHQIAEGLTYLHSAAVPPIY 456
Q ++ ++ +L+ HLH T K+ ++L+ IA Q A+G+ YLH+ + I
Sbjct: 78 -PQLAIVTQWCEGSSLYHHLHIIET-KFE----MIKLIDIARQTAQGMDYLHAKS---II 128
Query: 457 HRDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDSHIFTTAQGTMGYLDPEYYRNFQLT 516
HRD+KS+NI L E L K+ DFGL+ + ++ + SH F G++ ++ PE R +
Sbjct: 129 HRDLKSNNIFLHEDLTVKIGDFGLATV--KSRWSGSHQFEQLSGSILWMAPEVIR---MQ 183
Query: 517 DK------SDVYSFGVVLLELLTSKKAIDFNREEENVNLVVYMKKIMDEERLMEVVDPVL 570
DK SDVY+FG+VL EL+T + N + +++M V L
Sbjct: 184 DKNPYSFQSDVYAFGIVLYELMTGQLPYS---NINNRDQIIFM-----------VGRGYL 229
Query: 571 KERATHLDLETMKALGLLAASCLDERRQNRPSMKEVADEIEYI 613
+ + KA+ L A CL ++R RP ++ IE +
Sbjct: 230 SPDLSKVRSNCPKAMKRLMAECLKKKRDERPLFPQILASIELL 272
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 102 bits (253), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 81/283 (28%), Positives = 135/283 (47%), Gaps = 35/283 (12%)
Query: 338 IGTGGFGEVFKGILDDGTVTAIKRAKLGNTKGTDLVLNEVRILCQVNHRSLVRLLGCCVE 397
IG+G FG V+KG + + NEV +L + H +++ +G +
Sbjct: 21 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTK 80
Query: 398 LDQTLMIYEYIPNGTLFDHLHCDFTGKWPPLPWHLRLV-IAHQIAEGLTYLHSAAVPPIY 456
Q ++ ++ +L+ HLH T K+ ++L+ IA Q A+G+ YLH+ + I
Sbjct: 81 -PQLAIVTQWCEGSSLYHHLHIIET-KFE----MIKLIDIARQTAQGMDYLHAKS---II 131
Query: 457 HRDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDSHIFTTAQGTMGYLDPEYYRNFQLT 516
HRD+KS+NI L E L K+ DFGL+ + ++ + SH F G++ ++ PE R +
Sbjct: 132 HRDLKSNNIFLHEDLTVKIGDFGLATV--KSRWSGSHQFEQLSGSILWMAPEVIR---MQ 186
Query: 517 DK------SDVYSFGVVLLELLTSKKAIDFNREEENVNLVVYMKKIMDEERLMEVVDPVL 570
DK SDVY+FG+VL EL+T + N + +++M V L
Sbjct: 187 DKNPYSFQSDVYAFGIVLYELMTGQLPYS---NINNRDQIIFM-----------VGRGYL 232
Query: 571 KERATHLDLETMKALGLLAASCLDERRQNRPSMKEVADEIEYI 613
+ + KA+ L A CL ++R RP ++ IE +
Sbjct: 233 SPDLSKVRSNCPKAMKRLMAECLKKKRDERPLFPQILASIELL 275
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 81/283 (28%), Positives = 135/283 (47%), Gaps = 35/283 (12%)
Query: 338 IGTGGFGEVFKGILDDGTVTAIKRAKLGNTKGTDLVLNEVRILCQVNHRSLVRLLGCCVE 397
IG+G FG V+KG + + NEV +L + H +++ +G +
Sbjct: 16 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTK 75
Query: 398 LDQTLMIYEYIPNGTLFDHLHCDFTGKWPPLPWHLRLV-IAHQIAEGLTYLHSAAVPPIY 456
Q ++ ++ +L+ HLH T K+ ++L+ IA Q A+G+ YLH+ + I
Sbjct: 76 -PQLAIVTQWCEGSSLYHHLHIIET-KFE----MIKLIDIARQTAQGMDYLHAKS---II 126
Query: 457 HRDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDSHIFTTAQGTMGYLDPEYYRNFQLT 516
HRD+KS+NI L E L K+ DFGL+ + ++ + SH F G++ ++ PE R +
Sbjct: 127 HRDLKSNNIFLHEDLTVKIGDFGLATV--KSRWSGSHQFEQLSGSILWMAPEVIR---MQ 181
Query: 517 DK------SDVYSFGVVLLELLTSKKAIDFNREEENVNLVVYMKKIMDEERLMEVVDPVL 570
DK SDVY+FG+VL EL+T + N + +++M V L
Sbjct: 182 DKNPYSFQSDVYAFGIVLYELMTGQLPYS---NINNRDQIIFM-----------VGRGYL 227
Query: 571 KERATHLDLETMKALGLLAASCLDERRQNRPSMKEVADEIEYI 613
+ + KA+ L A CL ++R RP ++ IE +
Sbjct: 228 SPDLSKVRSNCPKAMKRLMAECLKKKRDERPLFPQILASIELL 270
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 80/282 (28%), Positives = 131/282 (46%), Gaps = 37/282 (13%)
Query: 338 IGTGGFGEVFKGILDDGTVTAIKRAKLGNTKGTDLVLNEVRILCQVNHRSLVRLLGCCVE 397
IG+G FG V+KG + + NEV +L + H +++ +G +
Sbjct: 20 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTK 79
Query: 398 LDQTLMIYEYIPNGTLFDHLHCDFTGKWPPLPWHLRLVIAHQIAEGLTYLHSAAVPPIYH 457
Q ++ ++ +L+ HLH T + IA Q A G+ YLH+ + I H
Sbjct: 80 -PQLAIVTQWCEGSSLYHHLHASET----KFEMKKLIDIARQTARGMDYLHAKS---IIH 131
Query: 458 RDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDSHIFTTAQGTMGYLDPEYYR------ 511
RD+KS+NI L E K+ DFGL+ + ++ + SH F G++ ++ PE R
Sbjct: 132 RDLKSNNIFLHEDNTVKIGDFGLATV--KSRWSGSHQFEQLSGSILWMAPEVIRMQDSNP 189
Query: 512 -NFQLTDKSDVYSFGVVLLELLTSKKAIDFNREEENVNLVVYMKKIMDEERLMEVVD-PV 569
+FQ SDVY+FG+VL EL+T + N+N + ++++E+V
Sbjct: 190 YSFQ----SDVYAFGIVLYELMTGQLPY------SNIN---------NRDQIIEMVGRGS 230
Query: 570 LKERATHLDLETMKALGLLAASCLDERRQNRPSMKEVADEIE 611
L + + K + L A CL ++R RPS + EIE
Sbjct: 231 LSPDLSKVRSNCPKRMKRLMAECLKKKRDERPSFPRILAEIE 272
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 81/283 (28%), Positives = 135/283 (47%), Gaps = 35/283 (12%)
Query: 338 IGTGGFGEVFKGILDDGTVTAIKRAKLGNTKGTDLVLNEVRILCQVNHRSLVRLLGCCVE 397
IG+G FG V+KG + + NEV +L + H +++ +G +
Sbjct: 21 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTK 80
Query: 398 LDQTLMIYEYIPNGTLFDHLHCDFTGKWPPLPWHLRLV-IAHQIAEGLTYLHSAAVPPIY 456
Q ++ ++ +L+ HLH T K+ ++L+ IA Q A+G+ YLH+ + I
Sbjct: 81 -PQLAIVTQWCEGSSLYHHLHIIET-KFE----MIKLIDIARQTAQGMDYLHAKS---II 131
Query: 457 HRDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDSHIFTTAQGTMGYLDPEYYRNFQLT 516
HRD+KS+NI L E L K+ DFGL+ + ++ + SH F G++ ++ PE R +
Sbjct: 132 HRDLKSNNIFLHEDLTVKIGDFGLATV--KSRWSGSHQFEQLSGSILWMAPEVIR---MQ 186
Query: 517 DK------SDVYSFGVVLLELLTSKKAIDFNREEENVNLVVYMKKIMDEERLMEVVDPVL 570
DK SDVY+FG+VL EL+T + N + +++M V L
Sbjct: 187 DKNPYSFQSDVYAFGIVLYELMTGQLPYS---NINNRDQIIFM-----------VGRGYL 232
Query: 571 KERATHLDLETMKALGLLAASCLDERRQNRPSMKEVADEIEYI 613
+ + KA+ L A CL ++R RP ++ IE +
Sbjct: 233 SPDLSKVRSNCPKAMKRLMAECLKKKRDERPLFPQILASIELL 275
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 76/227 (33%), Positives = 117/227 (51%), Gaps = 29/227 (12%)
Query: 328 ATNNFSKDNLIGTGGFGEVFKG-ILDDGTVTAIKRAKLGNTKG-TDLV------LNEVRI 379
A N + IG GGFG V KG ++ D +V AIK LG+++G T+++ EV I
Sbjct: 17 ADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFI 76
Query: 380 LCQVNHRSLVRLLGCCVELDQTLMIYEYIPNGTLFDHLHCDFTGKWPPLPWHLRLVIAHQ 439
+ +NH ++V+L G + M+ E++P G L+ L K P+ W ++L +
Sbjct: 77 MSNLNHPNIVKLYGLM--HNPPRMVMEFVPCGDLYHRL----LDKAHPIKWSVKLRLMLD 130
Query: 440 IAEGLTYLHSAAVPPIYHRDVKSSNILL---DEK--LNAKVSDFGLSRLVERTETNDSHI 494
IA G+ Y+ + PPI HRD++S NI L DE + AKV+DFGLS+ H
Sbjct: 131 IALGIEYMQNQN-PPIVHRDLRSPNIFLQSLDENAPVCAKVADFGLSQ-------QSVHS 182
Query: 495 FTTAQGTMGYLDPEYY--RNFQLTDKSDVYSFGVVLLELLTSKKAID 539
+ G ++ PE T+K+D YSF ++L +LT + D
Sbjct: 183 VSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFD 229
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 81/283 (28%), Positives = 135/283 (47%), Gaps = 35/283 (12%)
Query: 338 IGTGGFGEVFKGILDDGTVTAIKRAKLGNTKGTDLVLNEVRILCQVNHRSLVRLLGCCVE 397
IG+G FG V+KG + + NEV +L + H +++ +G +
Sbjct: 44 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTK 103
Query: 398 LDQTLMIYEYIPNGTLFDHLHCDFTGKWPPLPWHLRLV-IAHQIAEGLTYLHSAAVPPIY 456
Q ++ ++ +L+ HLH T K+ ++L+ IA Q A+G+ YLH+ + I
Sbjct: 104 -PQLAIVTQWCEGSSLYHHLHIIET-KFE----MIKLIDIARQTAQGMDYLHAKS---II 154
Query: 457 HRDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDSHIFTTAQGTMGYLDPEYYRNFQLT 516
HRD+KS+NI L E L K+ DFGL+ + ++ + SH F G++ ++ PE R +
Sbjct: 155 HRDLKSNNIFLHEDLTVKIGDFGLATV--KSRWSGSHQFEQLSGSILWMAPEVIR---MQ 209
Query: 517 DK------SDVYSFGVVLLELLTSKKAIDFNREEENVNLVVYMKKIMDEERLMEVVDPVL 570
DK SDVY+FG+VL EL+T + N + +++M V L
Sbjct: 210 DKNPYSFQSDVYAFGIVLYELMTGQLPYS---NINNRDQIIFM-----------VGRGYL 255
Query: 571 KERATHLDLETMKALGLLAASCLDERRQNRPSMKEVADEIEYI 613
+ + KA+ L A CL ++R RP ++ IE +
Sbjct: 256 SPDLSKVRSNCPKAMKRLMAECLKKKRDERPLFPQILASIELL 298
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 81/283 (28%), Positives = 134/283 (47%), Gaps = 35/283 (12%)
Query: 338 IGTGGFGEVFKGILDDGTVTAIKRAKLGNTKGTDLVLNEVRILCQVNHRSLVRLLGCCVE 397
IG+G FG V+KG + + NEV +L + H +++ +G
Sbjct: 16 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTA 75
Query: 398 LDQTLMIYEYIPNGTLFDHLHCDFTGKWPPLPWHLRLV-IAHQIAEGLTYLHSAAVPPIY 456
Q ++ ++ +L+ HLH T K+ ++L+ IA Q A+G+ YLH+ + I
Sbjct: 76 -PQLAIVTQWCEGSSLYHHLHIIET-KFE----MIKLIDIARQTAQGMDYLHAKS---II 126
Query: 457 HRDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDSHIFTTAQGTMGYLDPEYYRNFQLT 516
HRD+KS+NI L E L K+ DFGL+ + ++ + SH F G++ ++ PE R +
Sbjct: 127 HRDLKSNNIFLHEDLTVKIGDFGLATV--KSRWSGSHQFEQLSGSILWMAPEVIR---MQ 181
Query: 517 DK------SDVYSFGVVLLELLTSKKAIDFNREEENVNLVVYMKKIMDEERLMEVVDPVL 570
DK SDVY+FG+VL EL+T + N + +++M V L
Sbjct: 182 DKNPYSFQSDVYAFGIVLYELMTGQLPYS---NINNRDQIIFM-----------VGRGYL 227
Query: 571 KERATHLDLETMKALGLLAASCLDERRQNRPSMKEVADEIEYI 613
+ + KA+ L A CL ++R RP ++ IE +
Sbjct: 228 SPDLSKVRSNCPKAMKRLMAECLKKKRDERPLFPQILASIELL 270
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 81/283 (28%), Positives = 135/283 (47%), Gaps = 35/283 (12%)
Query: 338 IGTGGFGEVFKGILDDGTVTAIKRAKLGNTKGTDLVLNEVRILCQVNHRSLVRLLGCCVE 397
IG+G FG V+KG + + NEV +L + H +++ +G +
Sbjct: 43 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTK 102
Query: 398 LDQTLMIYEYIPNGTLFDHLHCDFTGKWPPLPWHLRLV-IAHQIAEGLTYLHSAAVPPIY 456
Q ++ ++ +L+ HLH T K+ ++L+ IA Q A+G+ YLH+ + I
Sbjct: 103 -PQLAIVTQWCEGSSLYHHLHIIET-KFE----MIKLIDIARQTAQGMDYLHAKS---II 153
Query: 457 HRDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDSHIFTTAQGTMGYLDPEYYRNFQLT 516
HRD+KS+NI L E L K+ DFGL+ + ++ + SH F G++ ++ PE R +
Sbjct: 154 HRDLKSNNIFLHEDLTVKIGDFGLATV--KSRWSGSHQFEQLSGSILWMAPEVIR---MQ 208
Query: 517 DK------SDVYSFGVVLLELLTSKKAIDFNREEENVNLVVYMKKIMDEERLMEVVDPVL 570
DK SDVY+FG+VL EL+T + N + +++M V L
Sbjct: 209 DKNPYSFQSDVYAFGIVLYELMTGQLPYS---NINNRDQIIFM-----------VGRGYL 254
Query: 571 KERATHLDLETMKALGLLAASCLDERRQNRPSMKEVADEIEYI 613
+ + KA+ L A CL ++R RP ++ IE +
Sbjct: 255 SPDLSKVRSNCPKAMKRLMAECLKKKRDERPLFPQILASIELL 297
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 101 bits (251), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 88/291 (30%), Positives = 140/291 (48%), Gaps = 38/291 (13%)
Query: 333 SKDNLIGTGGFGEVFKGILDDGT-----VTAIKRAKLGNTKGTDL-VLNEVRILCQVNHR 386
++ +IG G FGEV+KG+L + AIK K G T+ + L E I+ Q +H
Sbjct: 47 TRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHH 106
Query: 387 SLVRLLGCCVELDQTLMIYEYIPNGTLFDHLHCDFTGKWPPLPWHLRLV-IAHQIAEGLT 445
+++RL G + ++I EY+ NG L D + G++ L +LV + IA G+
Sbjct: 107 NIIRLEGVISKYKPMMIITEYMENGAL-DKFLREKDGEFSVL----QLVGMLRGIAAGMK 161
Query: 446 YLHSAAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDSHIFTTAQGT--MG 503
YL + HRD+ + NIL++ L KVSDFGLSR++ E + +TT+ G +
Sbjct: 162 YLANMNY---VHRDLAARNILVNSNLVCKVSDFGLSRVL---EDDPEATYTTSGGKIPIR 215
Query: 504 YLDPEYYRNFQLTDKSDVYSFGVVLLELLTSKKAIDFNREEENVNLVVYMKKIMDEERLM 563
+ PE + T SDV+SFG+V+ E++T + + V MK I D RL
Sbjct: 216 WTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWELSNHEV-----MKAINDGFRL- 269
Query: 564 EVVDPVLKERATHLDLETMKALGLLAASCLDERRQNRPSMKEVADEIEYII 614
T +D + A+ L C + R RP ++ ++ +I
Sbjct: 270 ----------PTPMDCPS--AIYQLMMQCWQQERARRPKFADIVSILDKLI 308
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 67/199 (33%), Positives = 106/199 (53%), Gaps = 11/199 (5%)
Query: 338 IGTGGFGEVFKGILDDGTVTAIKRAKLGNTKGTDLVLNEVRILCQVNHRSLVRLLGCCVE 397
+G G GEV+ G + T A+K K G+ D L E ++ Q+ H+ LVRL +
Sbjct: 21 LGAGQAGEVWMGYYNGHTKVAVKSLKQGSM-SPDAFLAEANLMKQLQHQRLVRLYAVVTQ 79
Query: 398 LDQTLMIYEYIPNGTLFDHLHCDFTGKWPPLPWHLRLVIAHQIAEGLTYLHSAAVPPIYH 457
+ +I EY+ NG+L D L K L + L +A QIAEG+ ++ H
Sbjct: 80 -EPIYIITEYMENGSLVDFLKTPSGIK---LTINKLLDMAAQIAEGMAFIEERNY---IH 132
Query: 458 RDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDSHIFTTAQGTMGYLDPEYYRNFQLTD 517
RD++++NIL+ + L+ K++DFGL+RL+E E A+ + + PE T
Sbjct: 133 RDLRAANILVSDTLSCKIADFGLARLIEDAEXTARE---GAKFPIKWTAPEAINYGTFTI 189
Query: 518 KSDVYSFGVVLLELLTSKK 536
KSDV+SFG++L E++T +
Sbjct: 190 KSDVWSFGILLTEIVTHGR 208
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 99.8 bits (247), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 71/201 (35%), Positives = 107/201 (53%), Gaps = 13/201 (6%)
Query: 338 IGTGGFGEVFKGILDDGTVTAIKRAKLGNTKGTDLVLNEVRILCQVNHRSLVRLLGCCVE 397
+G G FGEV+ G + T AIK K G T + L E +I+ ++ H LV+L E
Sbjct: 17 LGNGQFGEVWMGTWNGNTKVAIKTLKPG-TMSPESFLEEAQIMKKLKHDKLVQLYAVVSE 75
Query: 398 LDQTLMIYEYIPNGTLFDHLHCDFTGKWPPLPWHLRLV-IAHQIAEGLTYLHSAAVPPIY 456
+ ++ EY+ G+L D L D G+ LP LV +A Q+A G+ Y+
Sbjct: 76 -EPIYIVTEYMNKGSLLDFLK-DGEGRALKLP---NLVDMAAQVAAGMAYIERMNY---I 127
Query: 457 HRDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDSHIFTTAQGTMGYLDPEYYRNFQLT 516
HRD++S+NIL+ L K++DFGL+RL+E E A+ + + PE + T
Sbjct: 128 HRDLRSANILVGNGLICKIADFGLARLIEDNEXTARQ---GAKFPIKWTAPEAALYGRFT 184
Query: 517 DKSDVYSFGVVLLELLTSKKA 537
KSDV+SFG++L EL+T +
Sbjct: 185 IKSDVWSFGILLTELVTKGRV 205
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 99.4 bits (246), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 75/227 (33%), Positives = 115/227 (50%), Gaps = 29/227 (12%)
Query: 328 ATNNFSKDNLIGTGGFGEVFKG-ILDDGTVTAIKRAKLGNTKG-TDLV------LNEVRI 379
A N + IG GGFG V KG ++ D +V AIK LG+++G T+++ EV I
Sbjct: 17 ADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFI 76
Query: 380 LCQVNHRSLVRLLGCCVELDQTLMIYEYIPNGTLFDHLHCDFTGKWPPLPWHLRLVIAHQ 439
+ +NH ++V+L G + M+ E++P G L+ L K P+ W ++L +
Sbjct: 77 MSNLNHPNIVKLYGLM--HNPPRMVMEFVPCGDLYHRL----LDKAHPIKWSVKLRLMLD 130
Query: 440 IAEGLTYLHSAAVPPIYHRDVKSSNILL---DEK--LNAKVSDFGLSRLVERTETNDSHI 494
IA G+ Y+ + PPI HRD++S NI L DE + AKV+DFG T H
Sbjct: 131 IALGIEYMQNQN-PPIVHRDLRSPNIFLQSLDENAPVCAKVADFG-------TSQQSVHS 182
Query: 495 FTTAQGTMGYLDPEYY--RNFQLTDKSDVYSFGVVLLELLTSKKAID 539
+ G ++ PE T+K+D YSF ++L +LT + D
Sbjct: 183 VSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFD 229
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 99.0 bits (245), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 75/227 (33%), Positives = 116/227 (51%), Gaps = 29/227 (12%)
Query: 328 ATNNFSKDNLIGTGGFGEVFKG-ILDDGTVTAIKRAKLGNTKG-TDLV------LNEVRI 379
A N + IG GGFG V KG ++ D +V AIK LG+++G T+++ EV I
Sbjct: 17 ADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFI 76
Query: 380 LCQVNHRSLVRLLGCCVELDQTLMIYEYIPNGTLFDHLHCDFTGKWPPLPWHLRLVIAHQ 439
+ +NH ++V+L G + M+ E++P G L+ L K P+ W ++L +
Sbjct: 77 MSNLNHPNIVKLYGLM--HNPPRMVMEFVPCGDLYHRL----LDKAHPIKWSVKLRLMLD 130
Query: 440 IAEGLTYLHSAAVPPIYHRDVKSSNILL---DEK--LNAKVSDFGLSRLVERTETNDSHI 494
IA G+ Y+ + PPI HRD++S NI L DE + AKV+DF LS+ H
Sbjct: 131 IALGIEYMQNQN-PPIVHRDLRSPNIFLQSLDENAPVCAKVADFSLSQ-------QSVHS 182
Query: 495 FTTAQGTMGYLDPEYY--RNFQLTDKSDVYSFGVVLLELLTSKKAID 539
+ G ++ PE T+K+D YSF ++L +LT + D
Sbjct: 183 VSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFD 229
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 98.6 bits (244), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 69/214 (32%), Positives = 111/214 (51%), Gaps = 21/214 (9%)
Query: 324 EIRRATNNFSKDNLIGTGGFGEVFKGILDDGTVTAIKRAKLGNTKGTDLVLNEVRILCQV 383
EI R + K +G G FGEV+ + T A+K K G+ + L E ++ +
Sbjct: 11 EIPRESLKLEKK--LGAGQFGEVWMATYNKHTKVAVKTMKPGSM-SVEAFLAEANVMKTL 67
Query: 384 NHRSLVRLLGCCVELDQTLMIYEYIPNGTLFDHLHCDFTGKWPPLPWHLRLV-IAHQIAE 442
H LV+L V + +I E++ G+L D L D G PLP +L+ + QIAE
Sbjct: 68 QHDKLVKL-HAVVTKEPIYIITEFMAKGSLLDFLKSD-EGSKQPLP---KLIDFSAQIAE 122
Query: 443 GLTYLHSAAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDSHIFTTAQGT- 501
G+ ++ HRD++++NIL+ L K++DFGL+R++E E +T +G
Sbjct: 123 GMAFIEQRNY---IHRDLRAANILVSASLVCKIADFGLARVIEDNE------YTAREGAK 173
Query: 502 --MGYLDPEYYRNFQLTDKSDVYSFGVVLLELLT 533
+ + PE T KSDV+SFG++L+E++T
Sbjct: 174 FPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVT 207
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 69/214 (32%), Positives = 111/214 (51%), Gaps = 21/214 (9%)
Query: 324 EIRRATNNFSKDNLIGTGGFGEVFKGILDDGTVTAIKRAKLGNTKGTDLVLNEVRILCQV 383
EI R + K +G G FGEV+ + T A+K K G+ + L E ++ +
Sbjct: 184 EIPRESLKLEKK--LGAGQFGEVWMATYNKHTKVAVKTMKPGSM-SVEAFLAEANVMKTL 240
Query: 384 NHRSLVRLLGCCVELDQTLMIYEYIPNGTLFDHLHCDFTGKWPPLPWHLRLV-IAHQIAE 442
H LV+L V + +I E++ G+L D L D G PLP +L+ + QIAE
Sbjct: 241 QHDKLVKL-HAVVTKEPIYIITEFMAKGSLLDFLKSD-EGSKQPLP---KLIDFSAQIAE 295
Query: 443 GLTYLHSAAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDSHIFTTAQGT- 501
G+ ++ HRD++++NIL+ L K++DFGL+R++E E +T +G
Sbjct: 296 GMAFIEQRNY---IHRDLRAANILVSASLVCKIADFGLARVIEDNE------YTAREGAK 346
Query: 502 --MGYLDPEYYRNFQLTDKSDVYSFGVVLLELLT 533
+ + PE T KSDV+SFG++L+E++T
Sbjct: 347 FPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVT 380
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 95.1 bits (235), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 87/296 (29%), Positives = 137/296 (46%), Gaps = 45/296 (15%)
Query: 331 NFSKDNLIGTGGFGEVFKGILD----DGTVTAIKRAKLGNT-KGTDLVLNEVRILCQVNH 385
N S D ++G G FGEV G L AIK K+G T K L E I+ Q +H
Sbjct: 34 NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDH 93
Query: 386 RSLVRLLGCCVELDQTLMIYEYIPNGTLFDHLH---CDFTGKWPPLPWHLRLV-IAHQIA 441
+++RL G + +++ EY+ NG+L L FT ++LV + IA
Sbjct: 94 PNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFT--------VIQLVGMLRGIA 145
Query: 442 EGLTYLHSAAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDSHIFTTAQGT 501
G+ YL HRD+ + NIL++ L KVSDFGLSR++ E + +TT G
Sbjct: 146 SGMKYLSDMGY---VHRDLAARNILINSNLVCKVSDFGLSRVL---EDDPEAAYTTRGGK 199
Query: 502 --MGYLDPEYYRNFQLTDKSDVYSFGVVLLELLTSKKAIDFNREEENVNLVVYMKKIMDE 559
+ + PE + T SDV+S+G+VL E+++ + + ++V +K + +
Sbjct: 200 IPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDV-----IKAVDEG 254
Query: 560 ERLMEVVD-PVLKERATHLDLETMKALGLLAASCLDERRQNRPSMKEVADEIEYII 614
RL +D P AL L C + R NRP +++ ++ +I
Sbjct: 255 YRLPPPMDCPA--------------ALYQLMLDCWQKDRNNRPKFEQIVSILDKLI 296
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 87/296 (29%), Positives = 137/296 (46%), Gaps = 45/296 (15%)
Query: 331 NFSKDNLIGTGGFGEVFKGILD----DGTVTAIKRAKLGNT-KGTDLVLNEVRILCQVNH 385
N S D ++G G FGEV G L AIK K+G T K L E I+ Q +H
Sbjct: 46 NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDH 105
Query: 386 RSLVRLLGCCVELDQTLMIYEYIPNGTLFDHLH---CDFTGKWPPLPWHLRLV-IAHQIA 441
+++RL G + +++ EY+ NG+L L FT ++LV + IA
Sbjct: 106 PNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFT--------VIQLVGMLRGIA 157
Query: 442 EGLTYLHSAAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDSHIFTTAQGT 501
G+ YL HRD+ + NIL++ L KVSDFGLSR++ E + +TT G
Sbjct: 158 SGMKYLSDMG---FVHRDLAARNILINSNLVCKVSDFGLSRVL---EDDPEAAYTTRGGK 211
Query: 502 --MGYLDPEYYRNFQLTDKSDVYSFGVVLLELLTSKKAIDFNREEENVNLVVYMKKIMDE 559
+ + PE + T SDV+S+G+VL E+++ + + ++V +K + +
Sbjct: 212 IPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDV-----IKAVDEG 266
Query: 560 ERLMEVVD-PVLKERATHLDLETMKALGLLAASCLDERRQNRPSMKEVADEIEYII 614
RL +D P AL L C + R NRP +++ ++ +I
Sbjct: 267 YRLPPPMDCPA--------------ALYQLMLDCWQKDRNNRPKFEQIVSILDKLI 308
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 87/296 (29%), Positives = 137/296 (46%), Gaps = 45/296 (15%)
Query: 331 NFSKDNLIGTGGFGEVFKGILD----DGTVTAIKRAKLGNT-KGTDLVLNEVRILCQVNH 385
N S D ++G G FGEV G L AIK K+G T K L E I+ Q +H
Sbjct: 17 NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDH 76
Query: 386 RSLVRLLGCCVELDQTLMIYEYIPNGTLFDHLH---CDFTGKWPPLPWHLRLV-IAHQIA 441
+++RL G + +++ EY+ NG+L L FT ++LV + IA
Sbjct: 77 PNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFT--------VIQLVGMLRGIA 128
Query: 442 EGLTYLHSAAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDSHIFTTAQGT 501
G+ YL HRD+ + NIL++ L KVSDFGLSR++ E + +TT G
Sbjct: 129 SGMKYLSDMGY---VHRDLAARNILINSNLVCKVSDFGLSRVL---EDDPEAAYTTRGGK 182
Query: 502 --MGYLDPEYYRNFQLTDKSDVYSFGVVLLELLTSKKAIDFNREEENVNLVVYMKKIMDE 559
+ + PE + T SDV+S+G+VL E+++ + + ++V +K + +
Sbjct: 183 IPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDV-----IKAVDEG 237
Query: 560 ERLMEVVD-PVLKERATHLDLETMKALGLLAASCLDERRQNRPSMKEVADEIEYII 614
RL +D P AL L C + R NRP +++ ++ +I
Sbjct: 238 YRLPPPMDCPA--------------ALYQLMLDCWQKDRNNRPKFEQIVSILDKLI 279
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 76/281 (27%), Positives = 129/281 (45%), Gaps = 31/281 (11%)
Query: 338 IGTGGFGEVFKGILDDGTVTAIKRAKLGNTKGTDLVLNEVRILCQVNHRSLVRLLGCCVE 397
IG+G FG V+KG I + + NEV +L + H +++ +G +
Sbjct: 44 IGSGSFGTVYKGKWHGDVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMTK 103
Query: 398 LDQTLMIYEYIPNGTLFDHLHCDFTGKWPPLPWHLRLVIAHQIAEGLTYLHSAAVPPIYH 457
D ++ ++ +L+ HLH T + IA Q A+G+ YLH+ I H
Sbjct: 104 -DNLAIVTQWCEGSSLYKHLHVQET----KFQMFQLIDIARQTAQGMDYLHAKN---IIH 155
Query: 458 RDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDSHIFTTAQGTMGYLDPEYYR---NFQ 514
RD+KS+NI L E L K+ DFGL+ + ++ + S G++ ++ PE R N
Sbjct: 156 RDMKSNNIFLHEGLTVKIGDFGLATV--KSRWSGSQQVEQPTGSVLWMAPEVIRMQDNNP 213
Query: 515 LTDKSDVYSFGVVLLELLTSKKAIDF--NREEENVNLVVYMKKIMDEERLMEVVDPVLKE 572
+ +SDVYS+G+VL EL+T + NR++ +++M V
Sbjct: 214 FSFQSDVYSYGIVLYELMTGELPYSHINNRDQ-----IIFM-----------VGRGYASP 257
Query: 573 RATHLDLETMKALGLLAASCLDERRQNRPSMKEVADEIEYI 613
+ L KA+ L A C+ + ++ RP ++ IE +
Sbjct: 258 DLSKLYKNCPKAMKRLVADCVKKVKEERPLFPQILSSIELL 298
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 87/296 (29%), Positives = 137/296 (46%), Gaps = 45/296 (15%)
Query: 331 NFSKDNLIGTGGFGEVFKGILD----DGTVTAIKRAKLGNT-KGTDLVLNEVRILCQVNH 385
N S D ++G G FGEV G L AIK K+G T K L E I+ Q +H
Sbjct: 44 NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDH 103
Query: 386 RSLVRLLGCCVELDQTLMIYEYIPNGTLFDHLH---CDFTGKWPPLPWHLRLV-IAHQIA 441
+++RL G + +++ EY+ NG+L L FT ++LV + IA
Sbjct: 104 PNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFT--------VIQLVGMLRGIA 155
Query: 442 EGLTYLHSAAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDSHIFTTAQGT 501
G+ YL HRD+ + NIL++ L KVSDFGLSR++ E + +TT G
Sbjct: 156 SGMKYLSDMGY---VHRDLAARNILINSNLVCKVSDFGLSRVL---EDDPEAAYTTRGGK 209
Query: 502 --MGYLDPEYYRNFQLTDKSDVYSFGVVLLELLTSKKAIDFNREEENVNLVVYMKKIMDE 559
+ + PE + T SDV+S+G+VL E+++ + + ++V +K + +
Sbjct: 210 IPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDV-----IKAVDEG 264
Query: 560 ERLMEVVD-PVLKERATHLDLETMKALGLLAASCLDERRQNRPSMKEVADEIEYII 614
RL +D P AL L C + R NRP +++ ++ +I
Sbjct: 265 YRLPPPMDCPA--------------ALYQLMLDCWQKDRNNRPKFEQIVSILDKLI 306
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 87/296 (29%), Positives = 137/296 (46%), Gaps = 45/296 (15%)
Query: 331 NFSKDNLIGTGGFGEVFKGILD----DGTVTAIKRAKLGNT-KGTDLVLNEVRILCQVNH 385
N S D ++G G FGEV G L AIK K+G T K L E I+ Q +H
Sbjct: 46 NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDH 105
Query: 386 RSLVRLLGCCVELDQTLMIYEYIPNGTLFDHLH---CDFTGKWPPLPWHLRLV-IAHQIA 441
+++RL G + +++ EY+ NG+L L FT ++LV + IA
Sbjct: 106 PNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFT--------VIQLVGMLRGIA 157
Query: 442 EGLTYLHSAAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDSHIFTTAQGT 501
G+ YL HRD+ + NIL++ L KVSDFGLSR++ E + +TT G
Sbjct: 158 SGMKYLSDMGY---VHRDLAARNILINSNLVCKVSDFGLSRVL---EDDPEAAYTTRGGK 211
Query: 502 --MGYLDPEYYRNFQLTDKSDVYSFGVVLLELLTSKKAIDFNREEENVNLVVYMKKIMDE 559
+ + PE + T SDV+S+G+VL E+++ + + ++V +K + +
Sbjct: 212 IPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDV-----IKAVDEG 266
Query: 560 ERLMEVVD-PVLKERATHLDLETMKALGLLAASCLDERRQNRPSMKEVADEIEYII 614
RL +D P AL L C + R NRP +++ ++ +I
Sbjct: 267 YRLPPPMDCPA--------------ALYQLMLDCWQKDRNNRPKFEQIVSILDKLI 308
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 87/296 (29%), Positives = 137/296 (46%), Gaps = 45/296 (15%)
Query: 331 NFSKDNLIGTGGFGEVFKGILD----DGTVTAIKRAKLGNT-KGTDLVLNEVRILCQVNH 385
N S D ++G G FGEV G L AIK K+G T K L E I+ Q +H
Sbjct: 46 NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDH 105
Query: 386 RSLVRLLGCCVELDQTLMIYEYIPNGTLFDHLH---CDFTGKWPPLPWHLRLV-IAHQIA 441
+++RL G + +++ EY+ NG+L L FT ++LV + IA
Sbjct: 106 PNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFT--------VIQLVGMLRGIA 157
Query: 442 EGLTYLHSAAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDSHIFTTAQGT 501
G+ YL HRD+ + NIL++ L KVSDFGLSR++ E + +TT G
Sbjct: 158 SGMKYLSDMGY---VHRDLAARNILINSNLVCKVSDFGLSRVL---EDDPEAAYTTRGGK 211
Query: 502 --MGYLDPEYYRNFQLTDKSDVYSFGVVLLELLTSKKAIDFNREEENVNLVVYMKKIMDE 559
+ + PE + T SDV+S+G+VL E+++ + + ++V +K + +
Sbjct: 212 IPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDV-----IKAVDEG 266
Query: 560 ERLMEVVD-PVLKERATHLDLETMKALGLLAASCLDERRQNRPSMKEVADEIEYII 614
RL +D P AL L C + R NRP +++ ++ +I
Sbjct: 267 YRLPPPMDCPA--------------ALYQLMLDCWQKDRNNRPKFEQIVSILDKLI 308
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 94.7 bits (234), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 87/296 (29%), Positives = 137/296 (46%), Gaps = 45/296 (15%)
Query: 331 NFSKDNLIGTGGFGEVFKGILD----DGTVTAIKRAKLGNT-KGTDLVLNEVRILCQVNH 385
N S D ++G G FGEV G L AIK K+G T K L E I+ Q +H
Sbjct: 46 NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDH 105
Query: 386 RSLVRLLGCCVELDQTLMIYEYIPNGTLFDHLH---CDFTGKWPPLPWHLRLV-IAHQIA 441
+++RL G + +++ EY+ NG+L L FT ++LV + IA
Sbjct: 106 PNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFT--------VIQLVGMLRGIA 157
Query: 442 EGLTYLHSAAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDSHIFTTAQGT 501
G+ YL HRD+ + NIL++ L KVSDFGLSR++ E + +TT G
Sbjct: 158 SGMKYLSDMGY---VHRDLAARNILINSNLVCKVSDFGLSRVL---EDDPEAAYTTRGGK 211
Query: 502 --MGYLDPEYYRNFQLTDKSDVYSFGVVLLELLTSKKAIDFNREEENVNLVVYMKKIMDE 559
+ + PE + T SDV+S+G+VL E+++ + + ++V +K + +
Sbjct: 212 IPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDV-----IKAVDEG 266
Query: 560 ERLMEVVD-PVLKERATHLDLETMKALGLLAASCLDERRQNRPSMKEVADEIEYII 614
RL +D P AL L C + R NRP +++ ++ +I
Sbjct: 267 YRLPPPMDCPA--------------ALYQLMLDCWQKDRNNRPKFEQIVSILDKLI 308
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 94.7 bits (234), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 87/296 (29%), Positives = 137/296 (46%), Gaps = 45/296 (15%)
Query: 331 NFSKDNLIGTGGFGEVFKGILD----DGTVTAIKRAKLGNT-KGTDLVLNEVRILCQVNH 385
N S D ++G G FGEV G L AIK K+G T K L E I+ Q +H
Sbjct: 46 NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDH 105
Query: 386 RSLVRLLGCCVELDQTLMIYEYIPNGTLFDHLH---CDFTGKWPPLPWHLRLV-IAHQIA 441
+++RL G + +++ EY+ NG+L L FT ++LV + IA
Sbjct: 106 PNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFT--------VIQLVGMLRGIA 157
Query: 442 EGLTYLHSAAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDSHIFTTAQGT 501
G+ YL HRD+ + NIL++ L KVSDFGLSR++ E + +TT G
Sbjct: 158 SGMKYLSDMGY---VHRDLAARNILINSNLVCKVSDFGLSRVL---EDDPEAAYTTRGGK 211
Query: 502 --MGYLDPEYYRNFQLTDKSDVYSFGVVLLELLTSKKAIDFNREEENVNLVVYMKKIMDE 559
+ + PE + T SDV+S+G+VL E+++ + + ++V +K + +
Sbjct: 212 IPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDV-----IKAVDEG 266
Query: 560 ERLMEVVD-PVLKERATHLDLETMKALGLLAASCLDERRQNRPSMKEVADEIEYII 614
RL +D P AL L C + R NRP +++ ++ +I
Sbjct: 267 YRLPPPMDCPA--------------ALYQLMLDCWQKDRNNRPKFEQIVSILDKLI 308
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 65/212 (30%), Positives = 111/212 (52%), Gaps = 27/212 (12%)
Query: 335 DNLIGTGGFGEVFKGILDDGTVTAIKRAKLGNTKGTDLVLNEVRILCQVNHRSLVRLLGC 394
+ ++G G FG V K V AIK+ + + + +V E+R L +VNH ++V+L G
Sbjct: 14 EEVVGRGAFGVVCKAKWRAKDV-AIKQIESESERKAFIV--ELRQLSRVNHPNIVKLYGA 70
Query: 395 CVELDQTLMIYEYIPNGTLFDHLHCDFTGKWPPLPWHLRLVIAH------QIAEGLTYLH 448
C L+ ++ EY G+L++ LH PLP++ AH Q ++G+ YLH
Sbjct: 71 C--LNPVCLVMEYAEGGSLYNVLHGA-----EPLPYY---TAAHAMSWCLQCSQGVAYLH 120
Query: 449 SAAVPPIYHRDVKSSNILLDEKLNA-KVSDFGLSRLVERTETNDSHIFTTAQGTMGYLDP 507
S + HRD+K N+LL K+ DFG + ++ TN+ +G+ ++ P
Sbjct: 121 SMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQTHMTNN-------KGSAAWMAP 173
Query: 508 EYYRNFQLTDKSDVYSFGVVLLELLTSKKAID 539
E + ++K DV+S+G++L E++T +K D
Sbjct: 174 EVFEGSNYSEKCDVFSWGIILWEVITRRKPFD 205
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 86/296 (29%), Positives = 137/296 (46%), Gaps = 45/296 (15%)
Query: 331 NFSKDNLIGTGGFGEVFKGILD----DGTVTAIKRAKLGNT-KGTDLVLNEVRILCQVNH 385
N S D ++G G FGEV G L AIK K+G T K L E I+ Q +H
Sbjct: 46 NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDH 105
Query: 386 RSLVRLLGCCVELDQTLMIYEYIPNGTLFDHLH---CDFTGKWPPLPWHLRLV-IAHQIA 441
+++RL G + +++ EY+ NG+L L FT ++LV + IA
Sbjct: 106 PNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFT--------VIQLVGMLRGIA 157
Query: 442 EGLTYLHSAAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDSHIFTTAQGT 501
G+ YL HRD+ + NIL++ L KVSDFGL+R++ E + +TT G
Sbjct: 158 SGMKYLSDMGY---VHRDLAARNILINSNLVCKVSDFGLARVL---EDDPEAAYTTRGGK 211
Query: 502 --MGYLDPEYYRNFQLTDKSDVYSFGVVLLELLTSKKAIDFNREEENVNLVVYMKKIMDE 559
+ + PE + T SDV+S+G+VL E+++ + + ++V +K + +
Sbjct: 212 IPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDV-----IKAVDEG 266
Query: 560 ERLMEVVD-PVLKERATHLDLETMKALGLLAASCLDERRQNRPSMKEVADEIEYII 614
RL +D P AL L C + R NRP +++ ++ +I
Sbjct: 267 YRLPPPMDCPA--------------ALYQLMLDCWQKDRNNRPKFEQIVSILDKLI 308
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 93.2 bits (230), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 65/212 (30%), Positives = 111/212 (52%), Gaps = 27/212 (12%)
Query: 335 DNLIGTGGFGEVFKGILDDGTVTAIKRAKLGNTKGTDLVLNEVRILCQVNHRSLVRLLGC 394
+ ++G G FG V K V AIK+ + + + +V E+R L +VNH ++V+L G
Sbjct: 13 EEVVGRGAFGVVCKAKWRAKDV-AIKQIESESERKAFIV--ELRQLSRVNHPNIVKLYGA 69
Query: 395 CVELDQTLMIYEYIPNGTLFDHLHCDFTGKWPPLPWHLRLVIAH------QIAEGLTYLH 448
C L+ ++ EY G+L++ LH PLP++ AH Q ++G+ YLH
Sbjct: 70 C--LNPVCLVMEYAEGGSLYNVLHGA-----EPLPYY---TAAHAMSWCLQCSQGVAYLH 119
Query: 449 SAAVPPIYHRDVKSSNILLDEKLNA-KVSDFGLSRLVERTETNDSHIFTTAQGTMGYLDP 507
S + HRD+K N+LL K+ DFG + ++ TN+ +G+ ++ P
Sbjct: 120 SMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQTHMTNN-------KGSAAWMAP 172
Query: 508 EYYRNFQLTDKSDVYSFGVVLLELLTSKKAID 539
E + ++K DV+S+G++L E++T +K D
Sbjct: 173 EVFEGSNYSEKCDVFSWGIILWEVITRRKPFD 204
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 92.8 bits (229), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 86/296 (29%), Positives = 136/296 (45%), Gaps = 45/296 (15%)
Query: 331 NFSKDNLIGTGGFGEVFKGILD----DGTVTAIKRAKLGNT-KGTDLVLNEVRILCQVNH 385
N S D ++G G FGEV G L AIK K+G T K L E I+ Q +H
Sbjct: 46 NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDH 105
Query: 386 RSLVRLLGCCVELDQTLMIYEYIPNGTLFDHLH---CDFTGKWPPLPWHLRLV-IAHQIA 441
+++RL G + +++ EY+ NG+L L FT ++LV + IA
Sbjct: 106 PNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFT--------VIQLVGMLRGIA 157
Query: 442 EGLTYLHSAAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDSHIFTTAQGT 501
G+ YL HRD+ + NIL++ L KVSDFGL R++ E + +TT G
Sbjct: 158 SGMKYLSDMGY---VHRDLAARNILINSNLVCKVSDFGLGRVL---EDDPEAAYTTRGGK 211
Query: 502 --MGYLDPEYYRNFQLTDKSDVYSFGVVLLELLTSKKAIDFNREEENVNLVVYMKKIMDE 559
+ + PE + T SDV+S+G+VL E+++ + + ++V +K + +
Sbjct: 212 IPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDV-----IKAVDEG 266
Query: 560 ERLMEVVD-PVLKERATHLDLETMKALGLLAASCLDERRQNRPSMKEVADEIEYII 614
RL +D P AL L C + R NRP +++ ++ +I
Sbjct: 267 YRLPPPMDCPA--------------ALYQLMLDCWQKDRNNRPKFEQIVSILDKLI 308
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 92.8 bits (229), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 72/231 (31%), Positives = 108/231 (46%), Gaps = 33/231 (14%)
Query: 327 RATNNFSKDNLIGTGGFGEVFKGI-LDDGTVTAIKRAKLGNTKGTDLVLNEVRILCQVNH 385
R ++F + ++G G FG+V K D AIK+ + K + +L+EV +L +NH
Sbjct: 3 RYASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLST-ILSEVMLLASLNH 61
Query: 386 RSLVRLLGC------------CVELDQTLMI-YEYIPNGTLFDHLHCDFTGKWPPLPWHL 432
+ +VR V+ TL I EY NGTL+D +H + + W L
Sbjct: 62 QYVVRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHSENLNQQRDEYWRL 121
Query: 433 RLVIAHQIAEGLTYLHSAAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVERTET--- 489
QI E L+Y+HS I HRD+K NI +DE N K+ DFGL++ V R+
Sbjct: 122 ----FRQILEALSYIHSQG---IIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILK 174
Query: 490 -------NDSHIFTTAQGTMGYLDPEYYRNF-QLTDKSDVYSFGVVLLELL 532
S T+A GT Y+ E +K D+YS G++ E++
Sbjct: 175 LDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMI 225
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 92.8 bits (229), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 67/213 (31%), Positives = 108/213 (50%), Gaps = 17/213 (7%)
Query: 338 IGTGGFGEVFKGILDDGTVTAIKRAKLGNTKGTDLVLNEVRILCQVNHRSLVRLLGCCVE 397
IG+G FG V G + AIK K G+ D + E ++ +++H LV+L G C+E
Sbjct: 35 IGSGQFGLVHLGYWLNKDKVAIKTIKEGSMSEDDFI-EEAEVMMKLSHPKLVQLYGVCLE 93
Query: 398 LDQTLMIYEYIPNGTLFDHLHCDFTGKWPPLPWHLRLVIAHQIAEGLTYLHSAAVPPIYH 457
+++E++ +G L D+L G + L + + EG+ YL A V H
Sbjct: 94 QAPICLVFEFMEHGCLSDYLRTQ-RGLFAA---ETLLGMCLDVCEGMAYLEEACV---IH 146
Query: 458 RDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDSHIFTTAQGT---MGYLDPEYYRNFQ 514
RD+ + N L+ E KVSDFG++R V +D +T++ GT + + PE + +
Sbjct: 147 RDLAARNCLVGENQVIKVSDFGMTRFV----LDDQ--YTSSTGTKFPVKWASPEVFSFSR 200
Query: 515 LTDKSDVYSFGVVLLELLTSKKAIDFNREEENV 547
+ KSDV+SFGV++ E+ + K NR V
Sbjct: 201 YSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEV 233
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 92.4 bits (228), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 66/213 (30%), Positives = 108/213 (50%), Gaps = 17/213 (7%)
Query: 338 IGTGGFGEVFKGILDDGTVTAIKRAKLGNTKGTDLVLNEVRILCQVNHRSLVRLLGCCVE 397
IG+G FG V G + AIK + G D + E ++ +++H LV+L G C+E
Sbjct: 15 IGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFI-EEAEVMMKLSHPKLVQLYGVCLE 73
Query: 398 LDQTLMIYEYIPNGTLFDHLHCDFTGKWPPLPWHLRLVIAHQIAEGLTYLHSAAVPPIYH 457
+++E++ +G L D+L G + L + + EG+ YL A+V H
Sbjct: 74 QAPICLVFEFMEHGCLSDYLRTQ-RGLFAA---ETLLGMCLDVCEGMAYLEEASV---IH 126
Query: 458 RDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDSHIFTTAQGT---MGYLDPEYYRNFQ 514
RD+ + N L+ E KVSDFG++R V +D +T++ GT + + PE + +
Sbjct: 127 RDLAARNCLVGENQVIKVSDFGMTRFV----LDDQ--YTSSTGTKFPVKWASPEVFSFSR 180
Query: 515 LTDKSDVYSFGVVLLELLTSKKAIDFNREEENV 547
+ KSDV+SFGV++ E+ + K NR V
Sbjct: 181 YSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEV 213
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 86/296 (29%), Positives = 136/296 (45%), Gaps = 45/296 (15%)
Query: 331 NFSKDNLIGTGGFGEVFKGILD----DGTVTAIKRAKLGNT-KGTDLVLNEVRILCQVNH 385
N S D ++G G FGEV G L AIK K+G T K L E I+ Q +H
Sbjct: 46 NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDH 105
Query: 386 RSLVRLLGCCVELDQTLMIYEYIPNGTLFDHLH---CDFTGKWPPLPWHLRLV-IAHQIA 441
+++RL G + +++ E + NG+L L FT ++LV + IA
Sbjct: 106 PNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFT--------VIQLVGMLRGIA 157
Query: 442 EGLTYLHSAAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDSHIFTTAQGT 501
G+ YL HRD+ + NIL++ L KVSDFGLSR++ E + +TT G
Sbjct: 158 SGMKYLSDMGA---VHRDLAARNILINSNLVCKVSDFGLSRVL---EDDPEAAYTTRGGK 211
Query: 502 --MGYLDPEYYRNFQLTDKSDVYSFGVVLLELLTSKKAIDFNREEENVNLVVYMKKIMDE 559
+ + PE + T SDV+S+G+VL E+++ + + ++V +K + +
Sbjct: 212 IPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDV-----IKAVDEG 266
Query: 560 ERLMEVVD-PVLKERATHLDLETMKALGLLAASCLDERRQNRPSMKEVADEIEYII 614
RL +D P AL L C + R NRP +++ ++ +I
Sbjct: 267 YRLPPPMDCPA--------------ALYQLMLDCWQKDRNNRPKFEQIVSILDKLI 308
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 75/229 (32%), Positives = 116/229 (50%), Gaps = 37/229 (16%)
Query: 318 RIFTGKEIRRATNNFSKDNLIGTGGFGEVFKGI-LDDGTVTAIKRAK--LGNTKGTDL-- 372
RI E++R ++G+G FG V+KGI + +G I A L T G
Sbjct: 33 RILKETELKRV-------KVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANV 85
Query: 373 -VLNEVRILCQVNHRSLVRLLGCCVELDQTL-MIYEYIPNGTLFD--HLHCDFTGKWPPL 428
++E I+ ++H LVRLLG C L T+ ++ + +P+G L + H H D G L
Sbjct: 86 EFMDEALIMASMDHPHLVRLLGVC--LSPTIQLVTQLMPHGCLLEYVHEHKDNIGSQLLL 143
Query: 429 PWHLRLVIAHQIAEGLTYLHSAAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVERTE 488
W + QIA+G+ YL + HRD+ + N+L+ + K++DFGL+RL+E
Sbjct: 144 NWCV------QIAKGMMYLEERR---LVHRDLAARNVLVKSPNHVKITDFGLARLLE--- 191
Query: 489 TNDSHIFTTAQGTMGY----LDPEYYRNFQLTDKSDVYSFGVVLLELLT 533
D + G M L+ +YR F T +SDV+S+GV + EL+T
Sbjct: 192 -GDEKEYNADGGKMPIKWMALECIHYRKF--THQSDVWSYGVTIWELMT 237
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 86/296 (29%), Positives = 136/296 (45%), Gaps = 45/296 (15%)
Query: 331 NFSKDNLIGTGGFGEVFKGILD----DGTVTAIKRAKLGNT-KGTDLVLNEVRILCQVNH 385
N S D ++G G FGEV G L AIK K+G T K L E I+ Q +H
Sbjct: 17 NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDH 76
Query: 386 RSLVRLLGCCVELDQTLMIYEYIPNGTLFDHLH---CDFTGKWPPLPWHLRLV-IAHQIA 441
+++RL G + +++ E + NG+L L FT ++LV + IA
Sbjct: 77 PNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFT--------VIQLVGMLRGIA 128
Query: 442 EGLTYLHSAAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDSHIFTTAQGT 501
G+ YL HRD+ + NIL++ L KVSDFGLSR++ E + +TT G
Sbjct: 129 SGMKYLSDMGY---VHRDLAARNILINSNLVCKVSDFGLSRVL---EDDPEAAYTTRGGK 182
Query: 502 --MGYLDPEYYRNFQLTDKSDVYSFGVVLLELLTSKKAIDFNREEENVNLVVYMKKIMDE 559
+ + PE + T SDV+S+G+VL E+++ + + ++V +K + +
Sbjct: 183 IPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDV-----IKAVDEG 237
Query: 560 ERLMEVVD-PVLKERATHLDLETMKALGLLAASCLDERRQNRPSMKEVADEIEYII 614
RL +D P AL L C + R NRP +++ ++ +I
Sbjct: 238 YRLPPPMDCPA--------------ALYQLMLDCWQKDRNNRPKFEQIVSILDKLI 279
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 66/213 (30%), Positives = 107/213 (50%), Gaps = 17/213 (7%)
Query: 338 IGTGGFGEVFKGILDDGTVTAIKRAKLGNTKGTDLVLNEVRILCQVNHRSLVRLLGCCVE 397
IG+G FG V G + AIK + G D + E ++ +++H LV+L G C+E
Sbjct: 18 IGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFI-EEAEVMMKLSHPKLVQLYGVCLE 76
Query: 398 LDQTLMIYEYIPNGTLFDHLHCDFTGKWPPLPWHLRLVIAHQIAEGLTYLHSAAVPPIYH 457
+++E++ +G L D+L G + L + + EG+ YL A V H
Sbjct: 77 QAPICLVFEFMEHGCLSDYLRTQ-RGLFAA---ETLLGMCLDVCEGMAYLEEACV---IH 129
Query: 458 RDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDSHIFTTAQGT---MGYLDPEYYRNFQ 514
RD+ + N L+ E KVSDFG++R V +D +T++ GT + + PE + +
Sbjct: 130 RDLAARNCLVGENQVIKVSDFGMTRFV----LDDQ--YTSSTGTKFPVKWASPEVFSFSR 183
Query: 515 LTDKSDVYSFGVVLLELLTSKKAIDFNREEENV 547
+ KSDV+SFGV++ E+ + K NR V
Sbjct: 184 YSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEV 216
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 66/213 (30%), Positives = 107/213 (50%), Gaps = 17/213 (7%)
Query: 338 IGTGGFGEVFKGILDDGTVTAIKRAKLGNTKGTDLVLNEVRILCQVNHRSLVRLLGCCVE 397
IG+G FG V G + AIK + G D + E ++ +++H LV+L G C+E
Sbjct: 13 IGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFI-EEAEVMMKLSHPKLVQLYGVCLE 71
Query: 398 LDQTLMIYEYIPNGTLFDHLHCDFTGKWPPLPWHLRLVIAHQIAEGLTYLHSAAVPPIYH 457
+++E++ +G L D+L G + L + + EG+ YL A V H
Sbjct: 72 QAPICLVFEFMEHGCLSDYLRTQ-RGLFAA---ETLLGMCLDVCEGMAYLEEACV---IH 124
Query: 458 RDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDSHIFTTAQGT---MGYLDPEYYRNFQ 514
RD+ + N L+ E KVSDFG++R V +D +T++ GT + + PE + +
Sbjct: 125 RDLAARNCLVGENQVIKVSDFGMTRFV----LDDQ--YTSSTGTKFPVKWASPEVFSFSR 178
Query: 515 LTDKSDVYSFGVVLLELLTSKKAIDFNREEENV 547
+ KSDV+SFGV++ E+ + K NR V
Sbjct: 179 YSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEV 211
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 66/213 (30%), Positives = 107/213 (50%), Gaps = 17/213 (7%)
Query: 338 IGTGGFGEVFKGILDDGTVTAIKRAKLGNTKGTDLVLNEVRILCQVNHRSLVRLLGCCVE 397
IG+G FG V G + AIK + G D + E ++ +++H LV+L G C+E
Sbjct: 15 IGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFI-EEAEVMMKLSHPKLVQLYGVCLE 73
Query: 398 LDQTLMIYEYIPNGTLFDHLHCDFTGKWPPLPWHLRLVIAHQIAEGLTYLHSAAVPPIYH 457
+++E++ +G L D+L G + L + + EG+ YL A V H
Sbjct: 74 QAPICLVFEFMEHGCLSDYLRTQ-RGLFAA---ETLLGMCLDVCEGMAYLEEACV---IH 126
Query: 458 RDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDSHIFTTAQGT---MGYLDPEYYRNFQ 514
RD+ + N L+ E KVSDFG++R V +D +T++ GT + + PE + +
Sbjct: 127 RDLAARNCLVGENQVIKVSDFGMTRFV----LDDQ--YTSSTGTKFPVKWASPEVFSFSR 180
Query: 515 LTDKSDVYSFGVVLLELLTSKKAIDFNREEENV 547
+ KSDV+SFGV++ E+ + K NR V
Sbjct: 181 YSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEV 213
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 86/296 (29%), Positives = 136/296 (45%), Gaps = 45/296 (15%)
Query: 331 NFSKDNLIGTGGFGEVFKGILD----DGTVTAIKRAKLGNT-KGTDLVLNEVRILCQVNH 385
N S D ++G G FGEV G L AIK K+G T K L E I+ Q +H
Sbjct: 46 NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDH 105
Query: 386 RSLVRLLGCCVELDQTLMIYEYIPNGTLFDHLH---CDFTGKWPPLPWHLRLV-IAHQIA 441
+++RL G + +++ E + NG+L L FT ++LV + IA
Sbjct: 106 PNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFT--------VIQLVGMLRGIA 157
Query: 442 EGLTYLHSAAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDSHIFTTAQGT 501
G+ YL HRD+ + NIL++ L KVSDFGLSR++ E + +TT G
Sbjct: 158 SGMKYLSDMGY---VHRDLAARNILINSNLVCKVSDFGLSRVL---EDDPEAAYTTRGGK 211
Query: 502 --MGYLDPEYYRNFQLTDKSDVYSFGVVLLELLTSKKAIDFNREEENVNLVVYMKKIMDE 559
+ + PE + T SDV+S+G+VL E+++ + + ++V +K + +
Sbjct: 212 IPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDV-----IKAVDEG 266
Query: 560 ERLMEVVD-PVLKERATHLDLETMKALGLLAASCLDERRQNRPSMKEVADEIEYII 614
RL +D P AL L C + R NRP +++ ++ +I
Sbjct: 267 YRLPPPMDCPA--------------ALYQLMLDCWQKDRNNRPKFEQIVSILDKLI 308
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 75/229 (32%), Positives = 116/229 (50%), Gaps = 37/229 (16%)
Query: 318 RIFTGKEIRRATNNFSKDNLIGTGGFGEVFKGI-LDDGTVTAIKRAK--LGNTKGTDL-- 372
RI E++R ++G+G FG V+KGI + +G I A L T G
Sbjct: 10 RILKETELKRV-------KVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANV 62
Query: 373 -VLNEVRILCQVNHRSLVRLLGCCVELDQTL-MIYEYIPNGTLFD--HLHCDFTGKWPPL 428
++E I+ ++H LVRLLG C L T+ ++ + +P+G L + H H D G L
Sbjct: 63 EFMDEALIMASMDHPHLVRLLGVC--LSPTIQLVTQLMPHGCLLEYVHEHKDNIGSQLLL 120
Query: 429 PWHLRLVIAHQIAEGLTYLHSAAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVERTE 488
W + QIA+G+ YL + HRD+ + N+L+ + K++DFGL+RL+E
Sbjct: 121 NWCV------QIAKGMMYLEERR---LVHRDLAARNVLVKSPNHVKITDFGLARLLE--- 168
Query: 489 TNDSHIFTTAQGTMGY----LDPEYYRNFQLTDKSDVYSFGVVLLELLT 533
D + G M L+ +YR F T +SDV+S+GV + EL+T
Sbjct: 169 -GDEKEYNADGGKMPIKWMALECIHYRKF--THQSDVWSYGVTIWELMT 214
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 90.1 bits (222), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 66/211 (31%), Positives = 106/211 (50%), Gaps = 25/211 (11%)
Query: 324 EIRRATNNFSKDNLIGTGGFGEVFKGILDDGTVTAIKRAKLGNTKGTDLVLNEVRILCQV 383
EI R + K +G G FGEV+ + T A+K K G+ + L E ++ +
Sbjct: 178 EIPRESLKLEKK--LGAGQFGEVWMATYNKHTKVAVKTMKPGSM-SVEAFLAEANVMKTL 234
Query: 384 NHRSLVRLLGCCVELDQTLMIYEYIPNGTLFDHLHCDFTGKWPPLPWHLRLV-IAHQIAE 442
H LV+L V + +I E++ G+L D L D G PLP +L+ + QIAE
Sbjct: 235 QHDKLVKL-HAVVTKEPIYIITEFMAKGSLLDFLKSD-EGSKQPLP---KLIDFSAQIAE 289
Query: 443 GLTYLHSAAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDSHIFTTAQGTM 502
G+ ++ HRD++++NIL+ L K++DFGL+R+ A+ +
Sbjct: 290 GMAFIEQRNY---IHRDLRAANILVSASLVCKIADFGLARV-------------GAKFPI 333
Query: 503 GYLDPEYYRNFQLTDKSDVYSFGVVLLELLT 533
+ PE T KSDV+SFG++L+E++T
Sbjct: 334 KWTAPEAINFGSFTIKSDVWSFGILLMEIVT 364
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 90.1 bits (222), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 79/292 (27%), Positives = 133/292 (45%), Gaps = 39/292 (13%)
Query: 324 EIRRATNNFSKDNLIGTGGFGEVFKGILDDGTVTAIKRAKLGNTKGTDLVLNEVRILCQV 383
E++R K+ +G+G FG V G A+K K G+ D E + + ++
Sbjct: 4 ELKREEITLLKE--LGSGQFGVVKLGKWKGQYDVAVKMIKEGSM-SEDEFFQEAQTMMKL 60
Query: 384 NHRSLVRLLGCCVELDQTLMIYEYIPNGTLFDHLHCDFTGKWPPLPWHLRLVIAHQIAEG 443
+H LV+ G C + ++ EYI NG L ++L G P L + + + EG
Sbjct: 61 SHPKLVKFYGVCSKEYPIYIVTEYISNGCLLNYLRSHGKGLEPSQ----LLEMCYDVCEG 116
Query: 444 LTYLHSAAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDSHIFTTAQGT-- 501
+ +L S HRD+ + N L+D L KVSDFG++R V +D ++ ++ GT
Sbjct: 117 MAFLESHQ---FIHRDLAARNCLVDRDLCVKVSDFGMTRYV----LDDQYV--SSVGTKF 167
Query: 502 -MGYLDPEYYRNFQLTDKSDVYSFGVVLLELLT-SKKAIDFNREEENVNLVVYMKKIMDE 559
+ + PE + F+ + KSDV++FG+++ E+ + K D E V K+
Sbjct: 168 PVKWSAPEVFHYFKYSSKSDVWAFGILMWEVFSLGKMPYDLYTNSEVV------LKVSQG 221
Query: 560 ERLMEVVDPVLKERATHLDLETMKALGLLAASCLDERRQNRPSMKEVADEIE 611
RL HL +T+ + SC E + RP+ +++ IE
Sbjct: 222 HRLYR----------PHLASDTIYQ---IMYSCWHELPEKRPTFQQLLSSIE 260
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 71/231 (30%), Positives = 107/231 (46%), Gaps = 33/231 (14%)
Query: 327 RATNNFSKDNLIGTGGFGEVFKGI-LDDGTVTAIKRAKLGNTKGTDLVLNEVRILCQVNH 385
R ++F + ++G G FG+V K D AIK+ + K + +L+EV +L +NH
Sbjct: 3 RYASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLST-ILSEVMLLASLNH 61
Query: 386 RSLVRLLGC------------CVELDQTLMI-YEYIPNGTLFDHLHCDFTGKWPPLPWHL 432
+ +VR V+ TL I EY N TL+D +H + + W L
Sbjct: 62 QYVVRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENRTLYDLIHSENLNQQRDEYWRL 121
Query: 433 RLVIAHQIAEGLTYLHSAAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVERTET--- 489
QI E L+Y+HS I HRD+K NI +DE N K+ DFGL++ V R+
Sbjct: 122 ----FRQILEALSYIHSQG---IIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILK 174
Query: 490 -------NDSHIFTTAQGTMGYLDPEYYRNF-QLTDKSDVYSFGVVLLELL 532
S T+A GT Y+ E +K D+YS G++ E++
Sbjct: 175 LDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMI 225
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 89.7 bits (221), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 66/213 (30%), Positives = 106/213 (49%), Gaps = 17/213 (7%)
Query: 338 IGTGGFGEVFKGILDDGTVTAIKRAKLGNTKGTDLVLNEVRILCQVNHRSLVRLLGCCVE 397
IG+G FG V G + AIK + G D + E ++ +++H LV+L G C+E
Sbjct: 16 IGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFI-EEAEVMMKLSHPKLVQLYGVCLE 74
Query: 398 LDQTLMIYEYIPNGTLFDHLHCDFTGKWPPLPWHLRLVIAHQIAEGLTYLHSAAVPPIYH 457
++ E++ +G L D+L G + L + + EG+ YL A V H
Sbjct: 75 QAPICLVTEFMEHGCLSDYLRTQ-RGLFAA---ETLLGMCLDVCEGMAYLEEACV---IH 127
Query: 458 RDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDSHIFTTAQGT---MGYLDPEYYRNFQ 514
RD+ + N L+ E KVSDFG++R V +D +T++ GT + + PE + +
Sbjct: 128 RDLAARNCLVGENQVIKVSDFGMTRFV----LDDQ--YTSSTGTKFPVKWASPEVFSFSR 181
Query: 515 LTDKSDVYSFGVVLLELLTSKKAIDFNREEENV 547
+ KSDV+SFGV++ E+ + K NR V
Sbjct: 182 YSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEV 214
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 89.4 bits (220), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 86/313 (27%), Positives = 147/313 (46%), Gaps = 48/313 (15%)
Query: 320 FTGKEIRRATNNFSKD---------NLIGTGGFGEVFKGILD----DGTVTAIKRAKLGN 366
FT ++ +A F+K+ +IG G FGEV G L AIK K G
Sbjct: 10 FTFEDPNQAVREFAKEIDASCIKIEKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGY 69
Query: 367 T-KGTDLVLNEVRILCQVNHRSLVRLLGCCVELDQTLMIYEYIPNGTLFDHLHCDFTGKW 425
T K L+E I+ Q +H +++ L G + ++I EY+ NG+L L + G++
Sbjct: 70 TDKQRRDFLSEASIMGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDAFLRKN-DGRF 128
Query: 426 PPLPWHLRLV-IAHQIAEGLTYLHSAAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLV 484
+ +LV + I G+ YL + HRD+ + NIL++ L KVSDFG+SR++
Sbjct: 129 TVI----QLVGMLRGIGSGMKYLSDMSA---VHRDLAARNILVNSNLVCKVSDFGMSRVL 181
Query: 485 ERTETNDSHIFTTAQGT--MGYLDPEYYRNFQLTDKSDVYSFGVVLLELLTSKKAIDFNR 542
E + +TT G + + PE + T SDV+S+G+V+ E+++ + ++
Sbjct: 182 ---EDDPEAAYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDM 238
Query: 543 EEENVNLVVYMKKIMDEERLMEVVD-PVLKERATHLDLETMKALGLLAASCLDERRQNRP 601
++V +K I + RL +D P+ AL L C + R +RP
Sbjct: 239 SNQDV-----IKAIEEGYRLPPPMDCPI--------------ALHQLMLDCWQKERSDRP 279
Query: 602 SMKEVADEIEYII 614
++ + ++ +I
Sbjct: 280 KFGQIVNMLDKLI 292
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 89.0 bits (219), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 61/197 (30%), Positives = 102/197 (51%), Gaps = 11/197 (5%)
Query: 338 IGTGGFGEVFKGILDDGTVTAIKRAKLGNTKGTDLVLNEVRILCQVNHRSLVRLLGCCVE 397
+G G FGEV++G+ ++T + +T + L E ++ ++ H +LV+LLG C
Sbjct: 19 LGGGQFGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 78
Query: 398 LDQTLMIYEYIPNGTLFDHL-HCDFTGKWPPLPWHLRLVIAHQIAEGLTYLHSAAVPPIY 456
+I E++ G L D+L C+ + + L +A QI+ + YL
Sbjct: 79 EPPFYIITEFMTYGNLLDYLRECNRQ----EVSAVVLLYMATQISSAMEYLEKKN---FI 131
Query: 457 HRDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDSHIFTTAQGTMGYLDPEYYRNFQLT 516
HRD+ + N L+ E KV+DFGLSRL+ +T +H A+ + + PE + +
Sbjct: 132 HRDLAARNCLVGENHLVKVADFGLSRLM-TGDTXTAH--AGAKFPIKWTAPESLAYNKFS 188
Query: 517 DKSDVYSFGVVLLELLT 533
KSDV++FGV+L E+ T
Sbjct: 189 IKSDVWAFGVLLWEIAT 205
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 72/231 (31%), Positives = 103/231 (44%), Gaps = 27/231 (11%)
Query: 323 KEIRRATNNFSKDNLIGTGGFGEVFKGIL------DDGTVTAIKRAKLGNTKGTDLVLNE 376
+ I+R +N +G G FG+VF D + A+K K + E
Sbjct: 8 QHIKR--HNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHRE 65
Query: 377 VRILCQVNHRSLVRLLGCCVELDQTLMIYEYIPNGTLFDHLHCD------FTGKWPP--L 428
+L + H +V+ G CVE D +M++EY+ +G L L PP L
Sbjct: 66 AELLTNLQHEHIVKFYGVCVEGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTEL 125
Query: 429 PWHLRLVIAHQIAEGLTYLHSAAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVERTE 488
L IA QIA G+ YL S HRD+ + N L+ E L K+ DFG+SR V T+
Sbjct: 126 TQSQMLHIAQQIAAGMVYLASQH---FVHRDLATRNCLVGENLLVKIGDFGMSRDVYSTD 182
Query: 489 TNDSHIFTTAQGTM---GYLDPEYYRNFQLTDKSDVYSFGVVLLELLTSKK 536
+ TM ++ PE + T +SDV+S GVVL E+ T K
Sbjct: 183 -----YYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGK 228
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 60/197 (30%), Positives = 102/197 (51%), Gaps = 11/197 (5%)
Query: 338 IGTGGFGEVFKGILDDGTVTAIKRAKLGNTKGTDLVLNEVRILCQVNHRSLVRLLGCCVE 397
+G G +GEV++G+ ++T + +T + L E ++ ++ H +LV+LLG C
Sbjct: 19 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 78
Query: 398 LDQTLMIYEYIPNGTLFDHL-HCDFTGKWPPLPWHLRLVIAHQIAEGLTYLHSAAVPPIY 456
+I E++ G L D+L C+ + + L +A QI+ + YL
Sbjct: 79 EPPFYIIIEFMTYGNLLDYLRECNRQ----EVSAVVLLYMATQISSAMEYLEKKN---FI 131
Query: 457 HRDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDSHIFTTAQGTMGYLDPEYYRNFQLT 516
HRD+ + N L+ E KV+DFGLSRL+ +T +H A+ + + PE + +
Sbjct: 132 HRDLAARNCLVGENHLVKVADFGLSRLM-TGDTXTAH--AGAKFPIKWTAPESLAYNKFS 188
Query: 517 DKSDVYSFGVVLLELLT 533
KSDV++FGV+L E+ T
Sbjct: 189 IKSDVWAFGVLLWEIAT 205
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 62/200 (31%), Positives = 102/200 (51%), Gaps = 17/200 (8%)
Query: 338 IGTGGFGEVFKGILDDGTVTAIKRAKLGNTKGTDLVLNEVRILCQVNHRSLVRLLGCCVE 397
+G G +GEV++G+ ++T + +T + L E ++ ++ H +LV+LLG C
Sbjct: 19 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 78
Query: 398 LDQTLMIYEYIPNGTLFDHL-HCDFTGKWPPLPWHLRLVIAHQIAEGLTYLHSAAVPPIY 456
+I E++ G L D+L C+ + + L +A QI+ + YL
Sbjct: 79 EPPFYIITEFMTYGNLLDYLRECNRQ----EVSAVVLLYMATQISSAMEYLEKKN---FI 131
Query: 457 HRDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDSHIFTTAQGT---MGYLDPEYYRNF 513
HRD+ + N L+ E KV+DFGLSRL+ T D+ FT G + + PE
Sbjct: 132 HRDLAARNCLVGENHLVKVADFGLSRLM----TGDT--FTAHAGAKFPIKWTAPESLAYN 185
Query: 514 QLTDKSDVYSFGVVLLELLT 533
+ + KSDV++FGV+L E+ T
Sbjct: 186 KFSIKSDVWAFGVLLWEIAT 205
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 60/198 (30%), Positives = 102/198 (51%), Gaps = 13/198 (6%)
Query: 338 IGTGGFGEVFKGILDDGTVTAIKRAKLGNTKGTDLVLNEVRILCQVNHRSLVRLLGCCVE 397
+G G +GEV++G+ ++T + +T + L E ++ ++ H +LV+LLG C
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 80
Query: 398 LDQTLMIYEYIPNGTLFDHL-HCDFTGKWPPLPWHLRLVIAHQIAEGLTYLHSAAVPPIY 456
+I E++ G L D+L C+ + + L +A QI+ + YL
Sbjct: 81 EPPFYIIIEFMTYGNLLDYLRECNRQ----EVSAVVLLYMATQISSAMEYLEKKN---FI 133
Query: 457 HRDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDSHI-FTTAQGTMGYLDPEYYRNFQL 515
HRD+ + N L+ E KV+DFGLSRL+ T D++ A+ + + PE +
Sbjct: 134 HRDLAARNCLVGENHLVKVADFGLSRLM----TGDTYTAHAGAKFPIKWTAPESLAYNKF 189
Query: 516 TDKSDVYSFGVVLLELLT 533
+ KSDV++FGV+L E+ T
Sbjct: 190 SIKSDVWAFGVLLWEIAT 207
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 60/198 (30%), Positives = 102/198 (51%), Gaps = 13/198 (6%)
Query: 338 IGTGGFGEVFKGILDDGTVTAIKRAKLGNTKGTDLVLNEVRILCQVNHRSLVRLLGCCVE 397
+G G +GEV++G+ ++T + +T + L E ++ ++ H +LV+LLG C
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 85
Query: 398 LDQTLMIYEYIPNGTLFDHL-HCDFTGKWPPLPWHLRLVIAHQIAEGLTYLHSAAVPPIY 456
+I E++ G L D+L C+ + + L +A QI+ + YL
Sbjct: 86 EPPFYIITEFMTYGNLLDYLRECNRQ----EVSAVVLLYMATQISSAMEYLEKKN---FI 138
Query: 457 HRDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDSHI-FTTAQGTMGYLDPEYYRNFQL 515
HRD+ + N L+ E KV+DFGLSRL+ T D++ A+ + + PE +
Sbjct: 139 HRDLAARNCLVGENHLVKVADFGLSRLM----TGDTYTAHAGAKFPIKWTAPESLAYNKF 194
Query: 516 TDKSDVYSFGVVLLELLT 533
+ KSDV++FGV+L E+ T
Sbjct: 195 SIKSDVWAFGVLLWEIAT 212
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 61/198 (30%), Positives = 101/198 (51%), Gaps = 13/198 (6%)
Query: 338 IGTGGFGEVFKGILDDGTVTAIKRAKLGNTKGTDLVLNEVRILCQVNHRSLVRLLGCCVE 397
+G G +GEV+ G+ ++T + +T + L E ++ ++ H +LV+LLG C
Sbjct: 40 LGGGQYGEVYVGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTL 99
Query: 398 LDQTLMIYEYIPNGTLFDHL-HCDFTGKWPPLPWHLRLVIAHQIAEGLTYLHSAAVPPIY 456
++ EY+P G L D+L C+ + + L +A QI+ + YL
Sbjct: 100 EPPFYIVTEYMPYGNLLDYLRECNRE----EVTAVVLLYMATQISSAMEYLEKKN---FI 152
Query: 457 HRDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDSHI-FTTAQGTMGYLDPEYYRNFQL 515
HRD+ + N L+ E KV+DFGLSRL+ T D++ A+ + + PE
Sbjct: 153 HRDLAARNCLVGENHVVKVADFGLSRLM----TGDTYTAHAGAKFPIKWTAPESLAYNTF 208
Query: 516 TDKSDVYSFGVVLLELLT 533
+ KSDV++FGV+L E+ T
Sbjct: 209 SIKSDVWAFGVLLWEIAT 226
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 81/289 (28%), Positives = 138/289 (47%), Gaps = 39/289 (13%)
Query: 335 DNLIGTGGFGEVFKGILD----DGTVTAIKRAKLGNT-KGTDLVLNEVRILCQVNHRSLV 389
+ +IG G FGEV G L AIK K G T K L+E I+ Q +H +++
Sbjct: 13 EKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNII 72
Query: 390 RLLGCCVELDQTLMIYEYIPNGTLFDHLHCDFTGKWPPLPWHLRLV-IAHQIAEGLTYLH 448
L G + ++I EY+ NG+L L + G++ + +LV + I G+ YL
Sbjct: 73 HLEGVVTKCKPVMIITEYMENGSLDAFLRKN-DGRFTVI----QLVGMLRGIGSGMKYLS 127
Query: 449 SAAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDSHIFTTAQGT--MGYLD 506
+ HRD+ + NIL++ L KVSDFG+SR++ E + +TT G + +
Sbjct: 128 DMSY---VHRDLAARNILVNSNLVCKVSDFGMSRVL---EDDPEAAYTTRGGKIPIRWTA 181
Query: 507 PEYYRNFQLTDKSDVYSFGVVLLELLTSKKAIDFNREEENVNLVVYMKKIMDEERLMEVV 566
PE + T SDV+S+G+V+ E+++ + ++ ++V +K I + RL +
Sbjct: 182 PEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDV-----IKAIEEGYRLPPPM 236
Query: 567 D-PVLKERATHLDLETMKALGLLAASCLDERRQNRPSMKEVADEIEYII 614
D P+ AL L C + R +RP ++ + ++ +I
Sbjct: 237 DCPI--------------ALHQLMLDCWQKERSDRPKFGQIVNMLDKLI 271
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 60/198 (30%), Positives = 102/198 (51%), Gaps = 13/198 (6%)
Query: 338 IGTGGFGEVFKGILDDGTVTAIKRAKLGNTKGTDLVLNEVRILCQVNHRSLVRLLGCCVE 397
+G G +GEV++G+ ++T + +T + L E ++ ++ H +LV+LLG C
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 80
Query: 398 LDQTLMIYEYIPNGTLFDHL-HCDFTGKWPPLPWHLRLVIAHQIAEGLTYLHSAAVPPIY 456
+I E++ G L D+L C+ + + L +A QI+ + YL
Sbjct: 81 EPPFYIITEFMTYGNLLDYLRECNRQ----EVSAVVLLYMATQISSAMEYLEKKN---FI 133
Query: 457 HRDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDSHI-FTTAQGTMGYLDPEYYRNFQL 515
HRD+ + N L+ E KV+DFGLSRL+ T D++ A+ + + PE +
Sbjct: 134 HRDLAARNCLVGENHLVKVADFGLSRLM----TGDTYTAHAGAKFPIKWTAPESLAYNKF 189
Query: 516 TDKSDVYSFGVVLLELLT 533
+ KSDV++FGV+L E+ T
Sbjct: 190 SIKSDVWAFGVLLWEIAT 207
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 60/198 (30%), Positives = 102/198 (51%), Gaps = 13/198 (6%)
Query: 338 IGTGGFGEVFKGILDDGTVTAIKRAKLGNTKGTDLVLNEVRILCQVNHRSLVRLLGCCVE 397
+G G +GEV++G+ ++T + +T + L E ++ ++ H +LV+LLG C
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 80
Query: 398 LDQTLMIYEYIPNGTLFDHL-HCDFTGKWPPLPWHLRLVIAHQIAEGLTYLHSAAVPPIY 456
+I E++ G L D+L C+ + + L +A QI+ + YL
Sbjct: 81 EPPFYIIIEFMTYGNLLDYLRECNRQ----EVSAVVLLYMATQISSAMEYLEKKN---FI 133
Query: 457 HRDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDSHI-FTTAQGTMGYLDPEYYRNFQL 515
HRD+ + N L+ E KV+DFGLSRL+ T D++ A+ + + PE +
Sbjct: 134 HRDLAARNCLVGENHLVKVADFGLSRLM----TGDTYTAHAGAKFPIKWTAPESLAYNKF 189
Query: 516 TDKSDVYSFGVVLLELLT 533
+ KSDV++FGV+L E+ T
Sbjct: 190 SIKSDVWAFGVLLWEIAT 207
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 60/198 (30%), Positives = 102/198 (51%), Gaps = 13/198 (6%)
Query: 338 IGTGGFGEVFKGILDDGTVTAIKRAKLGNTKGTDLVLNEVRILCQVNHRSLVRLLGCCVE 397
+G G +GEV++G+ ++T + +T + L E ++ ++ H +LV+LLG C
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 80
Query: 398 LDQTLMIYEYIPNGTLFDHL-HCDFTGKWPPLPWHLRLVIAHQIAEGLTYLHSAAVPPIY 456
+I E++ G L D+L C+ + + L +A QI+ + YL
Sbjct: 81 EPPFYIITEFMTYGNLLDYLRECNRQ----EVSAVVLLYMATQISSAMEYLEKKN---FI 133
Query: 457 HRDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDSHI-FTTAQGTMGYLDPEYYRNFQL 515
HRD+ + N L+ E KV+DFGLSRL+ T D++ A+ + + PE +
Sbjct: 134 HRDLAARNCLVGENHLVKVADFGLSRLM----TGDTYTAHAGAKFPIKWTAPESLAYNKF 189
Query: 516 TDKSDVYSFGVVLLELLT 533
+ KSDV++FGV+L E+ T
Sbjct: 190 SIKSDVWAFGVLLWEIAT 207
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 60/197 (30%), Positives = 102/197 (51%), Gaps = 11/197 (5%)
Query: 338 IGTGGFGEVFKGILDDGTVTAIKRAKLGNTKGTDLVLNEVRILCQVNHRSLVRLLGCCVE 397
+G G +GEV++G+ ++T + +T + L E ++ ++ H +LV+LLG C
Sbjct: 22 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 81
Query: 398 LDQTLMIYEYIPNGTLFDHL-HCDFTGKWPPLPWHLRLVIAHQIAEGLTYLHSAAVPPIY 456
+I E++ G L D+L C+ + + L +A QI+ + YL
Sbjct: 82 EPPFYIIIEFMTYGNLLDYLRECNRQ----EVNAVVLLYMATQISSAMEYLEKKN---FI 134
Query: 457 HRDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDSHIFTTAQGTMGYLDPEYYRNFQLT 516
HRD+ + N L+ E KV+DFGLSRL+ +T +H A+ + + PE + +
Sbjct: 135 HRDLAARNCLVGENHLVKVADFGLSRLM-TGDTXTAH--AGAKFPIKWTAPESLAYNKFS 191
Query: 517 DKSDVYSFGVVLLELLT 533
KSDV++FGV+L E+ T
Sbjct: 192 IKSDVWAFGVLLWEIAT 208
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 60/198 (30%), Positives = 102/198 (51%), Gaps = 13/198 (6%)
Query: 338 IGTGGFGEVFKGILDDGTVTAIKRAKLGNTKGTDLVLNEVRILCQVNHRSLVRLLGCCVE 397
+G G +GEV++G+ ++T + +T + L E ++ ++ H +LV+LLG C
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 85
Query: 398 LDQTLMIYEYIPNGTLFDHL-HCDFTGKWPPLPWHLRLVIAHQIAEGLTYLHSAAVPPIY 456
+I E++ G L D+L C+ + + L +A QI+ + YL
Sbjct: 86 EPPFYIIIEFMTYGNLLDYLRECNRQ----EVNAVVLLYMATQISSAMEYLEKKN---FI 138
Query: 457 HRDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDSHI-FTTAQGTMGYLDPEYYRNFQL 515
HRD+ + N L+ E KV+DFGLSRL+ T D++ A+ + + PE +
Sbjct: 139 HRDLAARNCLVGENHLVKVADFGLSRLM----TGDTYTAHAGAKFPIKWTAPESLAYNKF 194
Query: 516 TDKSDVYSFGVVLLELLT 533
+ KSDV++FGV+L E+ T
Sbjct: 195 SIKSDVWAFGVLLWEIAT 212
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 75/258 (29%), Positives = 115/258 (44%), Gaps = 38/258 (14%)
Query: 327 RATNNFSKDNLIGTGGFGEVFKGI-LDDGTVTAIKRAKLGNTKGTDLVLNEVRILCQVNH 385
R ++F + ++G G FG+V K D AIK+ + K +L+EV +L +NH
Sbjct: 3 RYASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTEEK-LSTILSEVXLLASLNH 61
Query: 386 RSLVRLLGC------------CVELDQTLMI-YEYIPNGTLFDHLHCDFTGKWPPLPWHL 432
+ +VR V+ TL I EY N TL+D +H + + W L
Sbjct: 62 QYVVRYYAAWLERRNFVKPXTAVKKKSTLFIQXEYCENRTLYDLIHSENLNQQRDEYWRL 121
Query: 433 RLVIAHQIAEGLTYLHSAAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVERTET--- 489
QI E L+Y+HS I HR++K NI +DE N K+ DFGL++ V R+
Sbjct: 122 ----FRQILEALSYIHSQG---IIHRNLKPXNIFIDESRNVKIGDFGLAKNVHRSLDILK 174
Query: 490 -------NDSHIFTTAQGTMGYLDPEYYRNF-QLTDKSDVYSFGVVLLELLTSKKAIDFN 541
S T+A GT Y+ E +K D YS G++ E + F+
Sbjct: 175 LDSQNLPGSSDNLTSAIGTAXYVATEVLDGTGHYNEKIDXYSLGIIFFEXIYP-----FS 229
Query: 542 REEENVNLVVYMKKIMDE 559
E VN++ ++ + E
Sbjct: 230 TGXERVNILKKLRSVSIE 247
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 81/289 (28%), Positives = 138/289 (47%), Gaps = 39/289 (13%)
Query: 335 DNLIGTGGFGEVFKGILD----DGTVTAIKRAKLGNT-KGTDLVLNEVRILCQVNHRSLV 389
+ +IG G FGEV G L AIK K G T K L+E I+ Q +H +++
Sbjct: 19 EKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNII 78
Query: 390 RLLGCCVELDQTLMIYEYIPNGTLFDHLHCDFTGKWPPLPWHLRLV-IAHQIAEGLTYLH 448
L G + ++I EY+ NG+L L + G++ + +LV + I G+ YL
Sbjct: 79 HLEGVVTKCKPVMIITEYMENGSLDAFLRKN-DGRFTVI----QLVGMLRGIGSGMKYLS 133
Query: 449 SAAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDSHIFTTAQGT--MGYLD 506
+ HRD+ + NIL++ L KVSDFG+SR++ E + +TT G + +
Sbjct: 134 DMSY---VHRDLAARNILVNSNLVCKVSDFGMSRVL---EDDPEAAYTTRGGKIPIRWTA 187
Query: 507 PEYYRNFQLTDKSDVYSFGVVLLELLTSKKAIDFNREEENVNLVVYMKKIMDEERLMEVV 566
PE + T SDV+S+G+V+ E+++ + ++ ++V +K I + RL +
Sbjct: 188 PEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDV-----IKAIEEGYRLPPPM 242
Query: 567 D-PVLKERATHLDLETMKALGLLAASCLDERRQNRPSMKEVADEIEYII 614
D P+ AL L C + R +RP ++ + ++ +I
Sbjct: 243 DCPI--------------ALHQLMLDCWQKERSDRPKFGQIVNMLDKLI 277
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 60/197 (30%), Positives = 102/197 (51%), Gaps = 11/197 (5%)
Query: 338 IGTGGFGEVFKGILDDGTVTAIKRAKLGNTKGTDLVLNEVRILCQVNHRSLVRLLGCCVE 397
+G G +GEV++G+ ++T + +T + L E ++ ++ H +LV+LLG C
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 85
Query: 398 LDQTLMIYEYIPNGTLFDHL-HCDFTGKWPPLPWHLRLVIAHQIAEGLTYLHSAAVPPIY 456
+I E++ G L D+L C+ + + L +A QI+ + YL
Sbjct: 86 EPPFYIITEFMTYGNLLDYLRECNRQ----EVNAVVLLYMATQISSAMEYLEKKN---FI 138
Query: 457 HRDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDSHIFTTAQGTMGYLDPEYYRNFQLT 516
HRD+ + N L+ E KV+DFGLSRL+ +T +H A+ + + PE + +
Sbjct: 139 HRDLAARNCLVGENHLVKVADFGLSRLM-TGDTXTAH--AGAKFPIKWTAPESLAYNKFS 195
Query: 517 DKSDVYSFGVVLLELLT 533
KSDV++FGV+L E+ T
Sbjct: 196 IKSDVWAFGVLLWEIAT 212
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 60/198 (30%), Positives = 102/198 (51%), Gaps = 13/198 (6%)
Query: 338 IGTGGFGEVFKGILDDGTVTAIKRAKLGNTKGTDLVLNEVRILCQVNHRSLVRLLGCCVE 397
+G G +GEV++G+ ++T + +T + L E ++ ++ H +LV+LLG C
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 85
Query: 398 LDQTLMIYEYIPNGTLFDHL-HCDFTGKWPPLPWHLRLVIAHQIAEGLTYLHSAAVPPIY 456
+I E++ G L D+L C+ + + L +A QI+ + YL
Sbjct: 86 EPPFYIITEFMTYGNLLDYLRECNRQ----EVNAVVLLYMATQISSAMEYLEKKN---FI 138
Query: 457 HRDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDSHI-FTTAQGTMGYLDPEYYRNFQL 515
HRD+ + N L+ E KV+DFGLSRL+ T D++ A+ + + PE +
Sbjct: 139 HRDLAARNCLVGENHLVKVADFGLSRLM----TGDTYTAHAGAKFPIKWTAPESLAYNKF 194
Query: 516 TDKSDVYSFGVVLLELLT 533
+ KSDV++FGV+L E+ T
Sbjct: 195 SIKSDVWAFGVLLWEIAT 212
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 84/305 (27%), Positives = 139/305 (45%), Gaps = 46/305 (15%)
Query: 327 RATNNFSKD---------NLIGTGGFGEVFKGILD----DGTVTAIKRAKLGNT-KGTDL 372
RA + F+K+ +IG G FGEV G L AIK K+G T K
Sbjct: 31 RAVHQFAKELDASCIKIERVIGAGEFGEVCSGRLKLPGKRDVAVAIKTLKVGYTEKQRRD 90
Query: 373 VLNEVRILCQVNHRSLVRLLGCCVELDQTLMIYEYIPNGTLFDHLHCDFTGKWPPLPWHL 432
L E I+ Q +H ++V L G +++ E++ NG L D G++ +
Sbjct: 91 FLCEASIMGQFDHPNVVHLEGVVTRGKPVMIVIEFMENGAL-DAFLRKHDGQFTVI---- 145
Query: 433 RLV-IAHQIAEGLTYLHSAAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVERTETND 491
+LV + IA G+ YL HRD+ + NIL++ L KVSDFGLSR++ E +
Sbjct: 146 QLVGMLRGIAAGMRYLADMGY---VHRDLAARNILVNSNLVCKVSDFGLSRVI---EDDP 199
Query: 492 SHIFTTAQGTM--GYLDPEYYRNFQLTDKSDVYSFGVVLLELLTSKKAIDFNREEENVNL 549
++TT G + + PE + + T SDV+S+G+V+ E+++ + ++ ++V
Sbjct: 200 EAVYTTTGGKIPVRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDV-- 257
Query: 550 VVYMKKIMDEERLMEVVDPVLKERATHLDLETMKALGLLAASCLDERRQNRPSMKEVADE 609
+K I + RL +D L L C + R RP +++
Sbjct: 258 ---IKAIEEGYRLPAPMD-------------CPAGLHQLMLDCWQKERAERPKFEQIVGI 301
Query: 610 IEYII 614
++ +I
Sbjct: 302 LDKMI 306
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 87/313 (27%), Positives = 147/313 (46%), Gaps = 46/313 (14%)
Query: 320 FTGKEIRRATNNFSKD---------NLIGTGGFGEVFKGILD----DGTVTAIKRAKLGN 366
FT ++ A F+K+ +IG G FGEV G L AIK K G
Sbjct: 14 FTFEDPNEAVREFAKEIDISCVKIEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGY 73
Query: 367 T-KGTDLVLNEVRILCQVNHRSLVRLLGCCVELDQTLMIYEYIPNGTLFDHLHCDFTGKW 425
T K L+E I+ Q +H +++ L G + ++I E++ NG+L L + G++
Sbjct: 74 TEKQRRDFLSEASIMGQFDHPNVIHLEGVVTKSTPVMIITEFMENGSLDSFLRQN-DGQF 132
Query: 426 PPLPWHLRLV-IAHQIAEGLTYLHSAAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLV 484
+ +LV + IA G+ YL HRD+ + NIL++ L KVSDFGLSR +
Sbjct: 133 TVI----QLVGMLRGIAAGMKYLADMNY---VHRDLAARNILVNSNLVCKVSDFGLSRFL 185
Query: 485 ERTETNDSHIFTTAQG---TMGYLDPEYYRNFQLTDKSDVYSFGVVLLELLTSKKAIDFN 541
E +T+D +T+A G + + PE + + T SDV+S+G+V+ E+++ + ++
Sbjct: 186 E-DDTSDP-TYTSALGGKIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERPYWD 243
Query: 542 REEENVNLVVYMKKIMDEERLMEVVDPVLKERATHLDLETMKALGLLAASCLDERRQNRP 601
++V + I + RL +D AL L C + R +RP
Sbjct: 244 MTNQDV-----INAIEQDYRLPPPMD-------------CPSALHQLMLDCWQKDRNHRP 285
Query: 602 SMKEVADEIEYII 614
++ + ++ +I
Sbjct: 286 KFGQIVNTLDKMI 298
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 60/198 (30%), Positives = 102/198 (51%), Gaps = 13/198 (6%)
Query: 338 IGTGGFGEVFKGILDDGTVTAIKRAKLGNTKGTDLVLNEVRILCQVNHRSLVRLLGCCVE 397
+G G +GEV++G+ ++T + +T + L E ++ ++ H +LV+LLG C
Sbjct: 23 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 82
Query: 398 LDQTLMIYEYIPNGTLFDHL-HCDFTGKWPPLPWHLRLVIAHQIAEGLTYLHSAAVPPIY 456
+I E++ G L D+L C+ + + L +A QI+ + YL
Sbjct: 83 EPPFYIITEFMTYGNLLDYLRECNRQ----EVNAVVLLYMATQISSAMEYLEKKN---FI 135
Query: 457 HRDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDSHI-FTTAQGTMGYLDPEYYRNFQL 515
HRD+ + N L+ E KV+DFGLSRL+ T D++ A+ + + PE +
Sbjct: 136 HRDLAARNCLVGENHLVKVADFGLSRLM----TGDTYTAHAGAKFPIKWTAPESLAYNKF 191
Query: 516 TDKSDVYSFGVVLLELLT 533
+ KSDV++FGV+L E+ T
Sbjct: 192 SIKSDVWAFGVLLWEIAT 209
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 60/198 (30%), Positives = 102/198 (51%), Gaps = 13/198 (6%)
Query: 338 IGTGGFGEVFKGILDDGTVTAIKRAKLGNTKGTDLVLNEVRILCQVNHRSLVRLLGCCVE 397
+G G +GEV++G+ ++T + +T + L E ++ ++ H +LV+LLG C
Sbjct: 22 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 81
Query: 398 LDQTLMIYEYIPNGTLFDHL-HCDFTGKWPPLPWHLRLVIAHQIAEGLTYLHSAAVPPIY 456
+I E++ G L D+L C+ + + L +A QI+ + YL
Sbjct: 82 EPPFYIITEFMTYGNLLDYLRECNRQ----EVNAVVLLYMATQISSAMEYLEKKN---FI 134
Query: 457 HRDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDSHIF-TTAQGTMGYLDPEYYRNFQL 515
HRD+ + N L+ E KV+DFGLSRL+ T D++ A+ + + PE +
Sbjct: 135 HRDLAARNCLVGENHLVKVADFGLSRLM----TGDTYTAPAGAKFPIKWTAPESLAYNKF 190
Query: 516 TDKSDVYSFGVVLLELLT 533
+ KSDV++FGV+L E+ T
Sbjct: 191 SIKSDVWAFGVLLWEIAT 208
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 60/198 (30%), Positives = 102/198 (51%), Gaps = 13/198 (6%)
Query: 338 IGTGGFGEVFKGILDDGTVTAIKRAKLGNTKGTDLVLNEVRILCQVNHRSLVRLLGCCVE 397
+G G +GEV++G+ ++T + +T + L E ++ ++ H +LV+LLG C
Sbjct: 25 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 84
Query: 398 LDQTLMIYEYIPNGTLFDHL-HCDFTGKWPPLPWHLRLVIAHQIAEGLTYLHSAAVPPIY 456
+I E++ G L D+L C+ + + L +A QI+ + YL
Sbjct: 85 EPPFYIITEFMTYGNLLDYLRECNRQ----EVNAVVLLYMATQISSAMEYLEKKN---FI 137
Query: 457 HRDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDSHI-FTTAQGTMGYLDPEYYRNFQL 515
HRD+ + N L+ E KV+DFGLSRL+ T D++ A+ + + PE +
Sbjct: 138 HRDLAARNCLVGENHLVKVADFGLSRLM----TGDTYTAHAGAKFPIKWTAPESLAYNKF 193
Query: 516 TDKSDVYSFGVVLLELLT 533
+ KSDV++FGV+L E+ T
Sbjct: 194 SIKSDVWAFGVLLWEIAT 211
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 60/198 (30%), Positives = 102/198 (51%), Gaps = 13/198 (6%)
Query: 338 IGTGGFGEVFKGILDDGTVTAIKRAKLGNTKGTDLVLNEVRILCQVNHRSLVRLLGCCVE 397
+G G +GEV++G+ ++T + +T + L E ++ ++ H +LV+LLG C
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 85
Query: 398 LDQTLMIYEYIPNGTLFDHL-HCDFTGKWPPLPWHLRLVIAHQIAEGLTYLHSAAVPPIY 456
+I E++ G L D+L C+ + + L +A QI+ + YL
Sbjct: 86 EPPFYIITEFMTYGNLLDYLRECNRQ----EVNAVVLLYMATQISSAMEYLEKKN---FI 138
Query: 457 HRDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDSHI-FTTAQGTMGYLDPEYYRNFQL 515
HRD+ + N L+ E KV+DFGLSRL+ T D++ A+ + + PE +
Sbjct: 139 HRDLAARNCLVGENHLVKVADFGLSRLM----TGDTYTAHAGAKFPIKWTAPESLAYNKF 194
Query: 516 TDKSDVYSFGVVLLELLT 533
+ KSDV++FGV+L E+ T
Sbjct: 195 SIKSDVWAFGVLLWEIAT 212
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 60/198 (30%), Positives = 102/198 (51%), Gaps = 13/198 (6%)
Query: 338 IGTGGFGEVFKGILDDGTVTAIKRAKLGNTKGTDLVLNEVRILCQVNHRSLVRLLGCCVE 397
+G G +GEV++G+ ++T + +T + L E ++ ++ H +LV+LLG C
Sbjct: 23 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 82
Query: 398 LDQTLMIYEYIPNGTLFDHL-HCDFTGKWPPLPWHLRLVIAHQIAEGLTYLHSAAVPPIY 456
+I E++ G L D+L C+ + + L +A QI+ + YL
Sbjct: 83 EPPFYIITEFMTYGNLLDYLRECNRQ----EVNAVVLLYMATQISSAMEYLEKKN---FI 135
Query: 457 HRDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDSHI-FTTAQGTMGYLDPEYYRNFQL 515
HRD+ + N L+ E KV+DFGLSRL+ T D++ A+ + + PE +
Sbjct: 136 HRDLAARNCLVGENHLVKVADFGLSRLM----TGDTYTAHAGAKFPIKWTAPESLAYNKF 191
Query: 516 TDKSDVYSFGVVLLELLT 533
+ KSDV++FGV+L E+ T
Sbjct: 192 SIKSDVWAFGVLLWEIAT 209
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 60/198 (30%), Positives = 102/198 (51%), Gaps = 13/198 (6%)
Query: 338 IGTGGFGEVFKGILDDGTVTAIKRAKLGNTKGTDLVLNEVRILCQVNHRSLVRLLGCCVE 397
+G G +GEV++G+ ++T + +T + L E ++ ++ H +LV+LLG C
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 80
Query: 398 LDQTLMIYEYIPNGTLFDHL-HCDFTGKWPPLPWHLRLVIAHQIAEGLTYLHSAAVPPIY 456
+I E++ G L D+L C+ + + L +A QI+ + YL
Sbjct: 81 EPPFYIITEFMTYGNLLDYLRECNRQ----EVNAVVLLYMATQISSAMEYLEKKN---FI 133
Query: 457 HRDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDSHI-FTTAQGTMGYLDPEYYRNFQL 515
HRD+ + N L+ E KV+DFGLSRL+ T D++ A+ + + PE +
Sbjct: 134 HRDLAARNCLVGENHLVKVADFGLSRLM----TGDTYTAHAGAKFPIKWTAPESLAYNKF 189
Query: 516 TDKSDVYSFGVVLLELLT 533
+ KSDV++FGV+L E+ T
Sbjct: 190 SIKSDVWAFGVLLWEIAT 207
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 60/198 (30%), Positives = 102/198 (51%), Gaps = 13/198 (6%)
Query: 338 IGTGGFGEVFKGILDDGTVTAIKRAKLGNTKGTDLVLNEVRILCQVNHRSLVRLLGCCVE 397
+G G +GEV++G+ ++T + +T + L E ++ ++ H +LV+LLG C
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 80
Query: 398 LDQTLMIYEYIPNGTLFDHL-HCDFTGKWPPLPWHLRLVIAHQIAEGLTYLHSAAVPPIY 456
+I E++ G L D+L C+ + + L +A QI+ + YL
Sbjct: 81 EPPFYIITEFMTYGNLLDYLRECNRQ----EVNAVVLLYMATQISSAMEYLEKKN---FI 133
Query: 457 HRDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDSHI-FTTAQGTMGYLDPEYYRNFQL 515
HRD+ + N L+ E KV+DFGLSRL+ T D++ A+ + + PE +
Sbjct: 134 HRDLAARNCLVGENHLVKVADFGLSRLM----TGDTYTAHAGAKFPIKWTAPESLAYNKF 189
Query: 516 TDKSDVYSFGVVLLELLT 533
+ KSDV++FGV+L E+ T
Sbjct: 190 SIKSDVWAFGVLLWEIAT 207
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 60/198 (30%), Positives = 102/198 (51%), Gaps = 13/198 (6%)
Query: 338 IGTGGFGEVFKGILDDGTVTAIKRAKLGNTKGTDLVLNEVRILCQVNHRSLVRLLGCCVE 397
+G G +GEV++G+ ++T + +T + L E ++ ++ H +LV+LLG C
Sbjct: 23 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 82
Query: 398 LDQTLMIYEYIPNGTLFDHL-HCDFTGKWPPLPWHLRLVIAHQIAEGLTYLHSAAVPPIY 456
+I E++ G L D+L C+ + + L +A QI+ + YL
Sbjct: 83 EPPFYIITEFMTYGNLLDYLRECNRQ----EVNAVVLLYMATQISSAMEYLEKKN---FI 135
Query: 457 HRDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDSHIF-TTAQGTMGYLDPEYYRNFQL 515
HRD+ + N L+ E KV+DFGLSRL+ T D++ A+ + + PE +
Sbjct: 136 HRDLAARNCLVGENHLVKVADFGLSRLM----TGDTYTAPAGAKFPIKWTAPESLAYNKF 191
Query: 516 TDKSDVYSFGVVLLELLT 533
+ KSDV++FGV+L E+ T
Sbjct: 192 SIKSDVWAFGVLLWEIAT 209
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 60/198 (30%), Positives = 102/198 (51%), Gaps = 13/198 (6%)
Query: 338 IGTGGFGEVFKGILDDGTVTAIKRAKLGNTKGTDLVLNEVRILCQVNHRSLVRLLGCCVE 397
+G G +GEV++G+ ++T + +T + L E ++ ++ H +LV+LLG C
Sbjct: 34 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 93
Query: 398 LDQTLMIYEYIPNGTLFDHL-HCDFTGKWPPLPWHLRLVIAHQIAEGLTYLHSAAVPPIY 456
+I E++ G L D+L C+ + + L +A QI+ + YL
Sbjct: 94 EPPFYIITEFMTYGNLLDYLRECNRQ----EVNAVVLLYMATQISSAMEYLEKKN---FI 146
Query: 457 HRDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDSHI-FTTAQGTMGYLDPEYYRNFQL 515
HRD+ + N L+ E KV+DFGLSRL+ T D++ A+ + + PE +
Sbjct: 147 HRDLAARNCLVGENHLVKVADFGLSRLM----TGDTYTAHAGAKFPIKWTAPESLAYNKF 202
Query: 516 TDKSDVYSFGVVLLELLT 533
+ KSDV++FGV+L E+ T
Sbjct: 203 SIKSDVWAFGVLLWEIAT 220
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 70/220 (31%), Positives = 101/220 (45%), Gaps = 31/220 (14%)
Query: 338 IGTGGFGEVF----KGIL--DDGTVTAIKRAKLGNTKGTDLVLNEVRILCQVNHRSLVRL 391
+G G FG+VF +L D + A+K K + E +L + H+ +VR
Sbjct: 49 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRF 108
Query: 392 LGCCVELDQTLMIYEYIPNGTLFDHLHCD------FTGKWP----PLPWHLRLVIAHQIA 441
G C E LM++EY+ +G L L G PL L +A Q+A
Sbjct: 109 FGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVA 168
Query: 442 EGLTYLHSAAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDSHIFTTAQGT 501
G+ YL A HRD+ + N L+ + L K+ DFG+SR + T+ + T
Sbjct: 169 AGMVYL---AGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTD-----YYRVGGRT 220
Query: 502 M---GYLDPE--YYRNFQLTDKSDVYSFGVVLLELLTSKK 536
M ++ PE YR F T +SDV+SFGVVL E+ T K
Sbjct: 221 MLPIRWMPPESILYRKF--TTESDVWSFGVVLWEIFTYGK 258
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 59/198 (29%), Positives = 102/198 (51%), Gaps = 13/198 (6%)
Query: 338 IGTGGFGEVFKGILDDGTVTAIKRAKLGNTKGTDLVLNEVRILCQVNHRSLVRLLGCCVE 397
+G G +GEV++G+ ++T + +T + L E ++ ++ H +LV+LLG C
Sbjct: 228 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 287
Query: 398 LDQTLMIYEYIPNGTLFDHL-HCDFTGKWPPLPWHLRLVIAHQIAEGLTYLHSAAVPPIY 456
+I E++ G L D+L C+ + + L +A QI+ + YL
Sbjct: 288 EPPFYIITEFMTYGNLLDYLRECNRQ----EVSAVVLLYMATQISSAMEYLEKKN---FI 340
Query: 457 HRDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDSHI-FTTAQGTMGYLDPEYYRNFQL 515
HR++ + N L+ E KV+DFGLSRL+ T D++ A+ + + PE +
Sbjct: 341 HRNLAARNCLVGENHLVKVADFGLSRLM----TGDTYTAHAGAKFPIKWTAPESLAYNKF 396
Query: 516 TDKSDVYSFGVVLLELLT 533
+ KSDV++FGV+L E+ T
Sbjct: 397 SIKSDVWAFGVLLWEIAT 414
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 70/220 (31%), Positives = 101/220 (45%), Gaps = 31/220 (14%)
Query: 338 IGTGGFGEVF----KGIL--DDGTVTAIKRAKLGNTKGTDLVLNEVRILCQVNHRSLVRL 391
+G G FG+VF +L D + A+K K + E +L + H+ +VR
Sbjct: 20 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRF 79
Query: 392 LGCCVELDQTLMIYEYIPNGTLFDHLHCD------FTGKWP----PLPWHLRLVIAHQIA 441
G C E LM++EY+ +G L L G PL L +A Q+A
Sbjct: 80 FGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVA 139
Query: 442 EGLTYLHSAAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDSHIFTTAQGT 501
G+ YL A HRD+ + N L+ + L K+ DFG+SR + T+ + T
Sbjct: 140 AGMVYL---AGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTD-----YYRVGGRT 191
Query: 502 M---GYLDPE--YYRNFQLTDKSDVYSFGVVLLELLTSKK 536
M ++ PE YR F T +SDV+SFGVVL E+ T K
Sbjct: 192 MLPIRWMPPESILYRKF--TTESDVWSFGVVLWEIFTYGK 229
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 70/220 (31%), Positives = 101/220 (45%), Gaps = 31/220 (14%)
Query: 338 IGTGGFGEVF----KGIL--DDGTVTAIKRAKLGNTKGTDLVLNEVRILCQVNHRSLVRL 391
+G G FG+VF +L D + A+K K + E +L + H+ +VR
Sbjct: 26 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRF 85
Query: 392 LGCCVELDQTLMIYEYIPNGTLFDHLHCD------FTGKWP----PLPWHLRLVIAHQIA 441
G C E LM++EY+ +G L L G PL L +A Q+A
Sbjct: 86 FGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVA 145
Query: 442 EGLTYLHSAAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDSHIFTTAQGT 501
G+ YL A HRD+ + N L+ + L K+ DFG+SR + T+ + T
Sbjct: 146 AGMVYL---AGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTD-----YYRVGGRT 197
Query: 502 M---GYLDPE--YYRNFQLTDKSDVYSFGVVLLELLTSKK 536
M ++ PE YR F T +SDV+SFGVVL E+ T K
Sbjct: 198 MLPIRWMPPESILYRKF--TTESDVWSFGVVLWEIFTYGK 235
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 70/236 (29%), Positives = 106/236 (44%), Gaps = 43/236 (18%)
Query: 326 RRATNNFSKDNLIGTGGFGEVFKGILD-DGTVTAIKRAKLGNTKGTDLVLNEVRILCQVN 384
+R +F + LIG+GGFG+VFK DG I+R K N K EV+ L +++
Sbjct: 8 KRFGMDFKEIELIGSGGFGQVFKAKHRIDGKTYVIRRVKYNNEKAE----REVKALAKLD 63
Query: 385 HRSLVRLLGCCVEL-------DQTLMIYEYIPNGT----------LFDHLHCDFTGKWPP 427
H ++V GC D +L +Y P + LF + +F K
Sbjct: 64 HVNIVHYNGCWDGFDYDPETSDDSLESSDYDPENSKNSSRSKTKCLF--IQMEFCDKGTL 121
Query: 428 LPW-----------HLRLVIAHQIAEGLTYLHSAAVPPIYHRDVKSSNILLDEKLNAKVS 476
W L L + QI +G+ Y+HS + HRD+K SNI L + K+
Sbjct: 122 EQWIEKRRGEKLDKVLALELFEQITKGVDYIHS---KKLIHRDLKPSNIFLVDTKQVKIG 178
Query: 477 DFGLSRLVERTETNDSHIFTTAQGTMGYLDPEYYRNFQLTDKSDVYSFGVVLLELL 532
DFGL T + T ++GT+ Y+ PE + + D+Y+ G++L ELL
Sbjct: 179 DFGLV-----TSLKNDGKRTRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELL 229
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 64/212 (30%), Positives = 100/212 (47%), Gaps = 18/212 (8%)
Query: 337 LIGTGGFGEVFKGI-LDDGTVTAIKRAKLGNTKGTDLVLNEVRILCQVNHRSLVRLLGCC 395
++G G FG+ K + G V +K + + L EV+++ + H ++++ +G
Sbjct: 17 VLGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKFIGVL 76
Query: 396 VELDQTLMIYEYIPNGTLFDHLHCDFTGKWPPLPWHLRLVIAHQIAEGLTYLHSAAVPPI 455
+ + I EYI GTL + + PW R+ A IA G+ YLHS I
Sbjct: 77 YKDKRLNFITEYIKGGTLRGIIKSMDSQ----YPWSQRVSFAKDIASGMAYLHSMN---I 129
Query: 456 YHRDVKSSNILLDEKLNAKVSDFGLSRLV--ERTETN--------DSHIFTTAQGTMGYL 505
HRD+ S N L+ E N V+DFGL+RL+ E+T+ D T G ++
Sbjct: 130 IHRDLNSHNCLVRENKNVVVADFGLARLMVDEKTQPEGLRSLKKPDRKKRYTVVGNPYWM 189
Query: 506 DPEYYRNFQLTDKSDVYSFGVVLLELLTSKKA 537
PE +K DV+SFG+VL E++ A
Sbjct: 190 APEMINGRSYDEKVDVFSFGIVLCEIIGRVNA 221
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 78/278 (28%), Positives = 128/278 (46%), Gaps = 36/278 (12%)
Query: 332 FSKDNLIGTGGFGEVFKGILDDGT--VTAIKRAKLGNTKGTDLVLN-EVRILCQVNHRSL 388
F+K + IG G FGEV+KGI D+ T V AIK L + + E+ +L Q + +
Sbjct: 21 FTKLDRIGKGSFGEVYKGI-DNHTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYI 79
Query: 389 VRLLGCCVELDQTLMIYEYIPNGTLFDHLHCDFTGKWPPLPWHLRLVIAHQIAEGLTYLH 448
R G ++ + +I EY+ G+ D L K PL I +I +GL YLH
Sbjct: 80 TRYFGSYLKSTKLWIIMEYLGGGSALDLL------KPGPLEETYIATILREILKGLDYLH 133
Query: 449 SAAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDSHIFTTAQGTMGYLDPE 508
S HRD+K++N+LL E+ + K++DFG++ + T+ + GT ++ PE
Sbjct: 134 SERK---IHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNXFV----GTPFWMAPE 186
Query: 509 YYRNFQLTDKSDVYSFGVVLLELLTSKKAIDFNREEENVNLVVYMKKIMDEERLMEVVDP 568
+ K+D++S G+ +EL E N +L M V+
Sbjct: 187 VIKQSAYDFKADIWSLGITAIELAKG--------EPPNSDL-----------HPMRVLFL 227
Query: 569 VLKERATHLDLETMKALGLLAASCLDERRQNRPSMKEV 606
+ K L+ + K +CL++ + RP+ KE+
Sbjct: 228 IPKNSPPTLEGQHSKPFKEFVEACLNKDPRFRPTAKEL 265
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 66/211 (31%), Positives = 106/211 (50%), Gaps = 25/211 (11%)
Query: 335 DNLIGTGGFGEVFKGILD----DGTVTAIKRAKLGNT-KGTDLVLNEVRILCQVNHRSLV 389
+ +IG G FGEV +G L + AIK K G T + L+E I+ Q H +++
Sbjct: 19 EEVIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSEASIMGQFEHPNII 78
Query: 390 RLLGCCVELDQTLMIYEYIPNGTLFDHLHCD---FTGKWPPLPWHLRLV-IAHQIAEGLT 445
RL G +++ E++ NG L L + FT ++LV + IA G+
Sbjct: 79 RLEGVVTNSMPVMILTEFMENGALDSFLRLNDGQFT--------VIQLVGMLRGIASGMR 130
Query: 446 YLHSAAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDSHIFTTAQG---TM 502
YL + HRD+ + NIL++ L KVSDFGLSR +E E + +T++ G +
Sbjct: 131 YLAEMSY---VHRDLAARNILVNSNLVCKVSDFGLSRFLE--ENSSDPTYTSSLGGKIPI 185
Query: 503 GYLDPEYYRNFQLTDKSDVYSFGVVLLELLT 533
+ PE + T SD +S+G+V+ E+++
Sbjct: 186 RWTAPEAIAFRKFTSASDAWSYGIVMWEVMS 216
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 80/288 (27%), Positives = 135/288 (46%), Gaps = 37/288 (12%)
Query: 335 DNLIGTGGFGEVFKGILD----DGTVTAIKRAKLGNT-KGTDLVLNEVRILCQVNHRSLV 389
+ +IG G FGEV G L AIK K+G T K L E I+ Q +H +++
Sbjct: 27 ERVIGAGEFGEVCSGRLKLPGKRELPVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNII 86
Query: 390 RLLGCCVELDQTLMIYEYIPNGTLFDHLHCDFTGKWPPLPWHLRLV-IAHQIAEGLTYLH 448
L G + +++ EY+ NG+L L + G++ + +LV + I+ G+ YL
Sbjct: 87 HLEGVVTKSKPVMIVTEYMENGSLDTFLKKN-DGQFTVI----QLVGMLRGISAGMKYLS 141
Query: 449 SAAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDSHIFTTAQGT--MGYLD 506
HRD+ + NIL++ L KVSDFGLSR++ E + +TT G + +
Sbjct: 142 DMGY---VHRDLAARNILINSNLVCKVSDFGLSRVL---EDDPEAAYTTRGGKIPIRWTA 195
Query: 507 PEYYRNFQLTDKSDVYSFGVVLLELLTSKKAIDFNREEENVNLVVYMKKIMDEERLMEVV 566
PE + T SDV+S+G+V+ E+++ + + ++V +K + + RL +
Sbjct: 196 PEAIAFRKFTSASDVWSYGIVMWEVVSYGERPYWEMTNQDV-----IKAVEEGYRLPSPM 250
Query: 567 DPVLKERATHLDLETMKALGLLAASCLDERRQNRPSMKEVADEIEYII 614
D AL L C + R +RP E+ + ++ +I
Sbjct: 251 D-------------CPAALYQLMLDCWQKERNSRPKFDEIVNMLDKLI 285
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 69/253 (27%), Positives = 129/253 (50%), Gaps = 28/253 (11%)
Query: 292 MKKETKKLLIKQREEMLNAKAAGKSARIFTGKEIRRATNNFSKDNLIGTGGFGEVFKGI- 350
++K T + L+++RE + +G++ + ++ F K ++G+G FG V+KG+
Sbjct: 13 VRKRTLRRLLQERELVEPLTPSGEAPNQALLRILKE--TEFKKIKVLGSGAFGTVYKGLW 70
Query: 351 LDDGTVTAIKRAKL-----GNTKGTDLVLNEVRILCQVNHRSLVRLLGCCVELDQTLMIY 405
+ +G I A + + K +L+E ++ V++ + RLLG C+ +I
Sbjct: 71 IPEGEKVKIPVAIMELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLT-STVQLIT 129
Query: 406 EYIPNGTLFDHL--HCDFTGKWPPLPWHLRLVIAHQIAEGLTYLHSAAVPPIYHRDVKSS 463
+ +P G L D++ H D G L W + QIA+G+ YL + HRD+ +
Sbjct: 130 QLMPFGCLLDYVREHKDNIGSQYLLNWCV------QIAKGMNYLEDRR---LVHRDLAAR 180
Query: 464 NILLDEKLNAKVSDFGLSRLVERTETNDSHIFTTAQG---TMGYLDPEYYRNFQLTDKSD 520
N+L+ + K++DFGL++L+ E + H A+G + ++ E + T +SD
Sbjct: 181 NVLVKTPQHVKITDFGLAKLLG-AEEKEYH----AEGGKVPIKWMALESILHRIYTHQSD 235
Query: 521 VYSFGVVLLELLT 533
V+S+GV + EL+T
Sbjct: 236 VWSYGVTVWELMT 248
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 59/198 (29%), Positives = 102/198 (51%), Gaps = 13/198 (6%)
Query: 338 IGTGGFGEVFKGILDDGTVTAIKRAKLGNTKGTDLVLNEVRILCQVNHRSLVRLLGCCVE 397
+G G +GEV++G+ ++T + +T + L E ++ ++ H +LV+LLG C
Sbjct: 267 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 326
Query: 398 LDQTLMIYEYIPNGTLFDHL-HCDFTGKWPPLPWHLRLVIAHQIAEGLTYLHSAAVPPIY 456
+I E++ G L D+L C+ + + L +A QI+ + YL
Sbjct: 327 EPPFYIITEFMTYGNLLDYLRECNRQ----EVNAVVLLYMATQISSAMEYLEKKN---FI 379
Query: 457 HRDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDSHI-FTTAQGTMGYLDPEYYRNFQL 515
HR++ + N L+ E KV+DFGLSRL+ T D++ A+ + + PE +
Sbjct: 380 HRNLAARNCLVGENHLVKVADFGLSRLM----TGDTYTAHAGAKFPIKWTAPESLAYNKF 435
Query: 516 TDKSDVYSFGVVLLELLT 533
+ KSDV++FGV+L E+ T
Sbjct: 436 SIKSDVWAFGVLLWEIAT 453
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 59/198 (29%), Positives = 102/198 (51%), Gaps = 13/198 (6%)
Query: 338 IGTGGFGEVFKGILDDGTVTAIKRAKLGNTKGTDLVLNEVRILCQVNHRSLVRLLGCCVE 397
+G G +GEV++G+ ++T + +T + L E ++ ++ H +LV+LLG C
Sbjct: 225 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 284
Query: 398 LDQTLMIYEYIPNGTLFDHL-HCDFTGKWPPLPWHLRLVIAHQIAEGLTYLHSAAVPPIY 456
+I E++ G L D+L C+ + + L +A QI+ + YL
Sbjct: 285 EPPFYIITEFMTYGNLLDYLRECNRQ----EVNAVVLLYMATQISSAMEYLEKKN---FI 337
Query: 457 HRDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDSHI-FTTAQGTMGYLDPEYYRNFQL 515
HR++ + N L+ E KV+DFGLSRL+ T D++ A+ + + PE +
Sbjct: 338 HRNLAARNCLVGENHLVKVADFGLSRLM----TGDTYTAHAGAKFPIKWTAPESLAYNKF 393
Query: 516 TDKSDVYSFGVVLLELLT 533
+ KSDV++FGV+L E+ T
Sbjct: 394 SIKSDVWAFGVLLWEIAT 411
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 81/295 (27%), Positives = 134/295 (45%), Gaps = 39/295 (13%)
Query: 335 DNLIGTGGFGEVFKGILDDGTVTAIKRAKLGNTKGTDL-----VLNEVRILCQVNHRSLV 389
+ +IG G FG V+ G L D I A + TD+ L E I+ +H +++
Sbjct: 34 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 93
Query: 390 RLLGCCVELDQT-LMIYEYIPNGTLFDHLHCDFTGKWPPLPWHLRLV-IAHQIAEGLTYL 447
LLG C+ + + L++ Y+ +G L + + + P L+ Q+A+G+ YL
Sbjct: 94 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHN-----PTVKDLIGFGLQVAKGMKYL 148
Query: 448 HSAAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDSHIFTTAQGTMGYLDP 507
S HRD+ + N +LDEK KV+DFGL+R + E H T A+ + ++
Sbjct: 149 ASKK---FVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEXXSVHNKTGAKLPVKWMAL 205
Query: 508 EYYRNFQLTDKSDVYSFGVVLLELLTSKKAIDFNREEENVNLVVYMKKIMDEERLME--- 564
E + + T KSDV+SFGV+L EL+T + + ++ VY+ + RL++
Sbjct: 206 ESLQTQKFTTKSDVWSFGVLLWELMT--RGAPPYPDVNTFDITVYL---LQGRRLLQPEY 260
Query: 565 VVDPVLKERATHLDLETMKALGLLAASCLDERRQNRPSMKEVADEIEYIISIAKG 619
DP+ + + C + + RPS E+ I I S G
Sbjct: 261 CPDPLYE----------------VMLKCWHPKAEMRPSFSELVSRISAIFSTFIG 299
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 81/295 (27%), Positives = 134/295 (45%), Gaps = 39/295 (13%)
Query: 335 DNLIGTGGFGEVFKGILDDGTVTAIKRAKLGNTKGTDL-----VLNEVRILCQVNHRSLV 389
+ +IG G FG V+ G L D I A + TD+ L E I+ +H +++
Sbjct: 27 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 86
Query: 390 RLLGCCVELDQT-LMIYEYIPNGTLFDHLHCDFTGKWPPLPWHLRLV-IAHQIAEGLTYL 447
LLG C+ + + L++ Y+ +G L + + + P L+ Q+A+G+ YL
Sbjct: 87 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHN-----PTVKDLIGFGLQVAKGMKYL 141
Query: 448 HSAAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDSHIFTTAQGTMGYLDP 507
S HRD+ + N +LDEK KV+DFGL+R + E H T A+ + ++
Sbjct: 142 ASKK---FVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMAL 198
Query: 508 EYYRNFQLTDKSDVYSFGVVLLELLTSKKAIDFNREEENVNLVVYMKKIMDEERLME--- 564
E + + T KSDV+SFGV+L EL+T + + ++ VY+ + RL++
Sbjct: 199 ESLQTQKFTTKSDVWSFGVLLWELMT--RGAPPYPDVNTFDITVYL---LQGRRLLQPEY 253
Query: 565 VVDPVLKERATHLDLETMKALGLLAASCLDERRQNRPSMKEVADEIEYIISIAKG 619
DP+ + + C + + RPS E+ I I S G
Sbjct: 254 CPDPLYE----------------VMLKCWHPKAEMRPSFSELVSRISAIFSTFIG 292
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 63/206 (30%), Positives = 96/206 (46%), Gaps = 15/206 (7%)
Query: 338 IGTGGFGEVFKGILDDGTVTAIKRAKLGNTKGTDLVLN---EVRILCQVNHRSLVRLLGC 394
+G G +GEV + + T A+ + + D N E+ I +NH ++V+ G
Sbjct: 15 LGEGAYGEVQLAV-NRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHENVVKFYGH 73
Query: 395 CVELDQTLMIYEYIPNGTLFDHLHCDFTGKWPPLPWHLRLVIAHQIAEGLTYLHSAAVPP 454
E + + EY G LFD + D P P R HQ+ G+ YLH
Sbjct: 74 RREGNIQYLFLEYCSGGELFDRIEPDIGM---PEPDAQRFF--HQLMAGVVYLHGIG--- 125
Query: 455 IYHRDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDSHIFTTAQGTMGYLDPEYYRNFQ 514
I HRD+K N+LLDE+ N K+SDFGL+ + N + GT+ Y+ PE + +
Sbjct: 126 ITHRDIKPENLLLDERDNLKISDFGLATVFRY--NNRERLLNKMXGTLPYVAPELLKRRE 183
Query: 515 L-TDKSDVYSFGVVLLELLTSKKAID 539
+ DV+S G+VL +L + D
Sbjct: 184 FHAEPVDVWSCGIVLTAMLAGELPWD 209
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 63/206 (30%), Positives = 96/206 (46%), Gaps = 15/206 (7%)
Query: 338 IGTGGFGEVFKGILDDGTVTAIKRAKLGNTKGTDLVLN---EVRILCQVNHRSLVRLLGC 394
+G G +GEV + + T A+ + + D N E+ I +NH ++V+ G
Sbjct: 14 LGEGAYGEVQLAV-NRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHENVVKFYGH 72
Query: 395 CVELDQTLMIYEYIPNGTLFDHLHCDFTGKWPPLPWHLRLVIAHQIAEGLTYLHSAAVPP 454
E + + EY G LFD + D P P R HQ+ G+ YLH
Sbjct: 73 RREGNIQYLFLEYCSGGELFDRIEPDIGM---PEPDAQRFF--HQLMAGVVYLHGIG--- 124
Query: 455 IYHRDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDSHIFTTAQGTMGYLDPEYYRNFQ 514
I HRD+K N+LLDE+ N K+SDFGL+ + N + GT+ Y+ PE + +
Sbjct: 125 ITHRDIKPENLLLDERDNLKISDFGLATVFRY--NNRERLLNKMXGTLPYVAPELLKRRE 182
Query: 515 L-TDKSDVYSFGVVLLELLTSKKAID 539
+ DV+S G+VL +L + D
Sbjct: 183 FHAEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 62/203 (30%), Positives = 101/203 (49%), Gaps = 17/203 (8%)
Query: 332 FSKDNLIGTGGFGEVFKGILDDGT--VTAIKRAKLGNTKGTDLVLN-EVRILCQVNHRSL 388
F+K IG G FGEVFKGI D+ T V AIK L + + E+ +L Q + +
Sbjct: 25 FTKLERIGKGSFGEVFKGI-DNRTQQVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSSYV 83
Query: 389 VRLLGCCVELDQTLMIYEYIPNGTLFDHLHCDFTGKWPPLPWHLRLVIAHQIAEGLTYLH 448
+ G ++ + +I EY+ G+ D L P + +I +GL YLH
Sbjct: 84 TKYYGSYLKGSKLWIIMEYLGGGSALDLLRAG------PFDEFQIATMLKEILKGLDYLH 137
Query: 449 SAAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDSHIFTTAQGTMGYLDPE 508
S HRD+K++N+LL E+ + K++DFG++ + T+ + T GT ++ PE
Sbjct: 138 SEKK---IHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRN----TFVGTPFWMAPE 190
Query: 509 YYRNFQLTDKSDVYSFGVVLLEL 531
+ K+D++S G+ +EL
Sbjct: 191 VIQQSAYDSKADIWSLGITAIEL 213
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 73/240 (30%), Positives = 119/240 (49%), Gaps = 18/240 (7%)
Query: 314 GKSARIFTGKEIRRATNNFSKDNLIGTGGFGEVFKGIL----DDGTVTAIKRAKLGNTKG 369
G++ R FT +EI + + K +IG+G GEV G L AIK K G T+
Sbjct: 36 GRAGRSFT-REIEASRIHIEK--IIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTER 92
Query: 370 TDL-VLNEVRILCQVNHRSLVRLLGCCVELDQTLMIYEYIPNGTLFDHLHCDFTGKWPPL 428
L+E I+ Q +H +++RL G +++ EY+ NG+L D G++ +
Sbjct: 93 QRRDFLSEASIMGQFDHPNIIRLEGVVTRGRLAMIVTEYMENGSL-DTFLRTHDGQFTIM 151
Query: 429 PWHLRLV-IAHQIAEGLTYLHSAAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVERT 487
+LV + + G+ YL HRD+ + N+L+D L KVSDFGLSR++E
Sbjct: 152 ----QLVGMLRGVGAGMRYLSDLGY---VHRDLAARNVLVDSNLVCKVSDFGLSRVLE-D 203
Query: 488 ETNDSHIFTTAQGTMGYLDPEYYRNFQLTDKSDVYSFGVVLLELLTSKKAIDFNREEENV 547
+ + ++ T + + + PE + SDV+SFGVV+ E+L + +N +V
Sbjct: 204 DPDAAYTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERPYWNMTNRDV 263
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 65/215 (30%), Positives = 111/215 (51%), Gaps = 26/215 (12%)
Query: 330 NNFSKDNLIGTGGFGEVFKGI-LDDGTVT----AIKRAKLGNT-KGTDLVLNEVRILCQV 383
F K ++G+G FG V+KG+ + +G AIK + + K +L+E ++ V
Sbjct: 12 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 71
Query: 384 NHRSLVRLLGCCVELDQTLMIYEYIPNGTLFDHL--HCDFTGKWPPLPWHLRLVIAHQIA 441
++ + RLLG C+ +I + +P G L D++ H D G L W + QIA
Sbjct: 72 DNPHVCRLLGICLT-STVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCV------QIA 124
Query: 442 EGLTYLHSAAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDSHIFTTAQG- 500
EG+ YL + HRD+ + N+L+ + K++DFGL++L+ E + H A+G
Sbjct: 125 EGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLL-GAEEKEYH----AEGG 176
Query: 501 --TMGYLDPEYYRNFQLTDKSDVYSFGVVLLELLT 533
+ ++ E + T +SDV+S+GV + EL+T
Sbjct: 177 KVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 211
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 81/295 (27%), Positives = 134/295 (45%), Gaps = 39/295 (13%)
Query: 335 DNLIGTGGFGEVFKGILDDGTVTAIKRAKLGNTKGTDL-----VLNEVRILCQVNHRSLV 389
+ +IG G FG V+ G L D I A + TD+ L E I+ +H +++
Sbjct: 54 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 113
Query: 390 RLLGCCVELDQT-LMIYEYIPNGTLFDHLHCDFTGKWPPLPWHLRLV-IAHQIAEGLTYL 447
LLG C+ + + L++ Y+ +G L + + + P L+ Q+A+G+ YL
Sbjct: 114 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHN-----PTVKDLIGFGLQVAKGMKYL 168
Query: 448 HSAAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDSHIFTTAQGTMGYLDP 507
S HRD+ + N +LDEK KV+DFGL+R + E H T A+ + ++
Sbjct: 169 ASKK---FVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMAL 225
Query: 508 EYYRNFQLTDKSDVYSFGVVLLELLTSKKAIDFNREEENVNLVVYMKKIMDEERLME--- 564
E + + T KSDV+SFGV+L EL+T + + ++ VY+ + RL++
Sbjct: 226 ESLQTQKFTTKSDVWSFGVLLWELMT--RGAPPYPDVNTFDITVYL---LQGRRLLQPEY 280
Query: 565 VVDPVLKERATHLDLETMKALGLLAASCLDERRQNRPSMKEVADEIEYIISIAKG 619
DP+ + + C + + RPS E+ I I S G
Sbjct: 281 CPDPLYE----------------VMLKCWHPKAEMRPSFSELVSRISAIFSTFIG 319
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 62/206 (30%), Positives = 96/206 (46%), Gaps = 15/206 (7%)
Query: 338 IGTGGFGEVFKGILDDGTVTAIKRAKLGNTKGTDLVLNEVRILC---QVNHRSLVRLLGC 394
+G G +GEV + + T A+ + + D N + +C +NH ++V+ G
Sbjct: 14 LGEGAYGEVQLAV-NRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGH 72
Query: 395 CVELDQTLMIYEYIPNGTLFDHLHCDFTGKWPPLPWHLRLVIAHQIAEGLTYLHSAAVPP 454
E + + EY G LFD + D P P R HQ+ G+ YLH
Sbjct: 73 RREGNIQYLFLEYCSGGELFDRIEPDIGM---PEPDAQRFF--HQLMAGVVYLHGIG--- 124
Query: 455 IYHRDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDSHIFTTAQGTMGYLDPEYYRNFQ 514
I HRD+K N+LLDE+ N K+SDFGL+ + N + GT+ Y+ PE + +
Sbjct: 125 ITHRDIKPENLLLDERDNLKISDFGLATVFRY--NNRERLLNKMXGTLPYVAPELLKRRE 182
Query: 515 L-TDKSDVYSFGVVLLELLTSKKAID 539
+ DV+S G+VL +L + D
Sbjct: 183 FHAEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 80/296 (27%), Positives = 135/296 (45%), Gaps = 39/296 (13%)
Query: 335 DNLIGTGGFGEVFKGILDDGTVTAIKRAKLGNTKGTDL-----VLNEVRILCQVNHRSLV 389
+ +IG G FG V+ G L D I A + TD+ L E I+ +H +++
Sbjct: 94 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 153
Query: 390 RLLGCCVELDQT-LMIYEYIPNGTLFDHLHCDFTGKWPPLPWHLRLV-IAHQIAEGLTYL 447
LLG C+ + + L++ Y+ +G L + + + P L+ Q+A+G+ +L
Sbjct: 154 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHN-----PTVKDLIGFGLQVAKGMKFL 208
Query: 448 HSAAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDSHIFTTAQGTMGYLDP 507
S HRD+ + N +LDEK KV+DFGL+R + E + H T A+ + ++
Sbjct: 209 ASKK---FVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMAL 265
Query: 508 EYYRNFQLTDKSDVYSFGVVLLELLTSKKAIDFNREEENVNLVVYMKKIMDEERLME--- 564
E + + T KSDV+SFGV+L EL+T + + ++ VY+ + RL++
Sbjct: 266 ESLQTQKFTTKSDVWSFGVLLWELMT--RGAPPYPDVNTFDITVYL---LQGRRLLQPEY 320
Query: 565 VVDPVLKERATHLDLETMKALGLLAASCLDERRQNRPSMKEVADEIEYIISIAKGR 620
DP+ + + C + + RPS E+ I I S G
Sbjct: 321 CPDPLYE----------------VMLKCWHPKAEMRPSFSELVSRISAIFSTFIGE 360
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 81/295 (27%), Positives = 134/295 (45%), Gaps = 39/295 (13%)
Query: 335 DNLIGTGGFGEVFKGILDDGTVTAIKRAKLGNTKGTDL-----VLNEVRILCQVNHRSLV 389
+ +IG G FG V+ G L D I A + TD+ L E I+ +H +++
Sbjct: 53 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 112
Query: 390 RLLGCCVELDQT-LMIYEYIPNGTLFDHLHCDFTGKWPPLPWHLRLV-IAHQIAEGLTYL 447
LLG C+ + + L++ Y+ +G L + + + P L+ Q+A+G+ YL
Sbjct: 113 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHN-----PTVKDLIGFGLQVAKGMKYL 167
Query: 448 HSAAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDSHIFTTAQGTMGYLDP 507
S HRD+ + N +LDEK KV+DFGL+R + E H T A+ + ++
Sbjct: 168 ASKK---FVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMAL 224
Query: 508 EYYRNFQLTDKSDVYSFGVVLLELLTSKKAIDFNREEENVNLVVYMKKIMDEERLME--- 564
E + + T KSDV+SFGV+L EL+T + + ++ VY+ + RL++
Sbjct: 225 ESLQTQKFTTKSDVWSFGVLLWELMT--RGAPPYPDVNTFDITVYL---LQGRRLLQPEY 279
Query: 565 VVDPVLKERATHLDLETMKALGLLAASCLDERRQNRPSMKEVADEIEYIISIAKG 619
DP+ + + C + + RPS E+ I I S G
Sbjct: 280 CPDPLYE----------------VMLKCWHPKAEMRPSFSELVSRISAIFSTFIG 318
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 106/214 (49%), Gaps = 23/214 (10%)
Query: 332 FSKDNLI------GTGGFGEVFKGIL---DDGTVTAIKRAKLGNTKG-TDLVLNEVRILC 381
+DNL+ G G FG V +G+ AIK K G K T+ ++ E +I+
Sbjct: 6 LKRDNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMH 65
Query: 382 QVNHRSLVRLLGCCVELDQTLMIYEYIPNGTLFDHLHCDFTGKWPPLPWHLRLVIAHQIA 441
Q+++ +VRL+G C + + +++ E G L H GK +P + HQ++
Sbjct: 66 QLDNPYIVRLIGVC-QAEALMLVMEMAGGGPL----HKFLVGKREEIPVSNVAELLHQVS 120
Query: 442 EGLTYLHSAAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDSHIFTTAQGT 501
G+ YL HRD+ + N+LL + AK+SDFGLS+ + +DS+ + G
Sbjct: 121 MGMKYLEEKN---FVHRDLAARNVLLVNRHYAKISDFGLSKAL---GADDSYYTARSAGK 174
Query: 502 --MGYLDPEYYRNFQLTDKSDVYSFGVVLLELLT 533
+ + PE + + +SDV+S+GV + E L+
Sbjct: 175 WPLKWYAPECINFRKFSSRSDVWSYGVTMWEALS 208
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 81/295 (27%), Positives = 134/295 (45%), Gaps = 39/295 (13%)
Query: 335 DNLIGTGGFGEVFKGILDDGTVTAIKRAKLGNTKGTDL-----VLNEVRILCQVNHRSLV 389
+ +IG G FG V+ G L D I A + TD+ L E I+ +H +++
Sbjct: 32 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 91
Query: 390 RLLGCCVELDQT-LMIYEYIPNGTLFDHLHCDFTGKWPPLPWHLRLV-IAHQIAEGLTYL 447
LLG C+ + + L++ Y+ +G L + + + P L+ Q+A+G+ YL
Sbjct: 92 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHN-----PTVKDLIGFGLQVAKGMKYL 146
Query: 448 HSAAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDSHIFTTAQGTMGYLDP 507
S HRD+ + N +LDEK KV+DFGL+R + E H T A+ + ++
Sbjct: 147 ASKK---FVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMAL 203
Query: 508 EYYRNFQLTDKSDVYSFGVVLLELLTSKKAIDFNREEENVNLVVYMKKIMDEERLME--- 564
E + + T KSDV+SFGV+L EL+T + + ++ VY+ + RL++
Sbjct: 204 ESLQTQKFTTKSDVWSFGVLLWELMT--RGAPPYPDVNTFDITVYL---LQGRRLLQPEY 258
Query: 565 VVDPVLKERATHLDLETMKALGLLAASCLDERRQNRPSMKEVADEIEYIISIAKG 619
DP+ + + C + + RPS E+ I I S G
Sbjct: 259 CPDPLYE----------------VMLKCWHPKAEMRPSFSELVSRISAIFSTFIG 297
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 81/295 (27%), Positives = 134/295 (45%), Gaps = 39/295 (13%)
Query: 335 DNLIGTGGFGEVFKGILDDGTVTAIKRAKLGNTKGTDL-----VLNEVRILCQVNHRSLV 389
+ +IG G FG V+ G L D I A + TD+ L E I+ +H +++
Sbjct: 35 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 94
Query: 390 RLLGCCVELDQT-LMIYEYIPNGTLFDHLHCDFTGKWPPLPWHLRLV-IAHQIAEGLTYL 447
LLG C+ + + L++ Y+ +G L + + + P L+ Q+A+G+ YL
Sbjct: 95 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHN-----PTVKDLIGFGLQVAKGMKYL 149
Query: 448 HSAAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDSHIFTTAQGTMGYLDP 507
S HRD+ + N +LDEK KV+DFGL+R + E H T A+ + ++
Sbjct: 150 ASKK---FVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMAL 206
Query: 508 EYYRNFQLTDKSDVYSFGVVLLELLTSKKAIDFNREEENVNLVVYMKKIMDEERLME--- 564
E + + T KSDV+SFGV+L EL+T + + ++ VY+ + RL++
Sbjct: 207 ESLQTQKFTTKSDVWSFGVLLWELMT--RGAPPYPDVNTFDITVYL---LQGRRLLQPEY 261
Query: 565 VVDPVLKERATHLDLETMKALGLLAASCLDERRQNRPSMKEVADEIEYIISIAKG 619
DP+ + + C + + RPS E+ I I S G
Sbjct: 262 CPDPLYE----------------VMLKCWHPKAEMRPSFSELVSRISAIFSTFIG 300
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 62/206 (30%), Positives = 96/206 (46%), Gaps = 15/206 (7%)
Query: 338 IGTGGFGEVFKGILDDGTVTAIKRAKLGNTKGTDLVLNEVRILC---QVNHRSLVRLLGC 394
+G G +GEV + + T A+ + + D N + +C +NH ++V+ G
Sbjct: 14 LGEGAYGEVQLAV-NRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGH 72
Query: 395 CVELDQTLMIYEYIPNGTLFDHLHCDFTGKWPPLPWHLRLVIAHQIAEGLTYLHSAAVPP 454
E + + EY G LFD + D P P R HQ+ G+ YLH
Sbjct: 73 RREGNIQYLFLEYCSGGELFDRIEPDIGM---PEPDAQRFF--HQLMAGVVYLHGIG--- 124
Query: 455 IYHRDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDSHIFTTAQGTMGYLDPEYYRNFQ 514
I HRD+K N+LLDE+ N K+SDFGL+ + N + GT+ Y+ PE + +
Sbjct: 125 ITHRDIKPENLLLDERDNLKISDFGLATVFRY--NNRERLLNKMXGTLPYVAPELLKRRE 182
Query: 515 L-TDKSDVYSFGVVLLELLTSKKAID 539
+ DV+S G+VL +L + D
Sbjct: 183 FHAEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 66/204 (32%), Positives = 97/204 (47%), Gaps = 23/204 (11%)
Query: 338 IGTGGFGEVFKGILD-DGTVTAIKRAKLGNTKGTDL---VLNEVRILCQVNHRSLVRLLG 393
IG G FGEVF G L D T+ A+K + T DL L E RIL Q +H ++VRL+G
Sbjct: 122 IGRGNFGEVFSGRLRADNTLVAVKSCR--ETLPPDLKAKFLQEARILKQYSHPNIVRLIG 179
Query: 394 CCVELDQTLMIYEYIPNGTLFDHLHCDFTGKWPPLPWHLRLVIAHQI----AEGLTYLHS 449
C + ++ E + G L + LR+ Q+ A G+ YL S
Sbjct: 180 VCTQKQPIYIVMELVQGGDFLTFLRTEGA--------RLRVKTLLQMVGDAAAGMEYLES 231
Query: 450 AAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDSHIFTTAQGTMGYLDPEY 509
HRD+ + N L+ EK K+SDFG+SR E + + Q + + PE
Sbjct: 232 KCC---IHRDLAARNCLVTEKNVLKISDFGMSR--EEADGVXAASGGLRQVPVKWTAPEA 286
Query: 510 YRNFQLTDKSDVYSFGVVLLELLT 533
+ + +SDV+SFG++L E +
Sbjct: 287 LNYGRYSSESDVWSFGILLWETFS 310
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 81/289 (28%), Positives = 123/289 (42%), Gaps = 21/289 (7%)
Query: 325 IRRATNNFSKDNLIGTGGFGEVFKG-ILDDGTVTAIK---RAKLGNTKGTDLVLNEVRIL 380
I +F NL+G G F V++ + G AIK + + V NEV+I
Sbjct: 6 IGEKIEDFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIH 65
Query: 381 CQVNHRSLVRLLGCCVELDQTLMIYEYIPNGTLFDHLHCDFTGKWPPLPWHLRLVIAHQI 440
CQ+ H S++ L + + ++ E NG + +L + P + HQI
Sbjct: 66 CQLKHPSILELYNYFEDSNYVYLVLEMCHNGEMNRYL----KNRVKPFSENEARHFMHQI 121
Query: 441 AEGLTYLHSAAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDSHIFTTAQG 500
G+ YLHS I HRD+ SN+LL +N K++DFGL+ + ++ H T G
Sbjct: 122 ITGMLYLHSHG---ILHRDLTLSNLLLTRNMNIKIADFGLA--TQLKMPHEKHY--TLCG 174
Query: 501 TMGYLDPEYYRNFQLTDKSDVYSFGVVLLELLTSKKAIDFNREEENVNLVVYMKKIMDEE 560
T Y+ PE +SDV+S G + LL + D + + +N VV M
Sbjct: 175 TPNYISPEIATRSAHGLESDVWSLGCMFYTLLIGRPPFDTDTVKNTLNKVVLADYEMPSF 234
Query: 561 RLMEVVDPVLKERATHLDLETMKALGLLAASCLDERRQNRPSMKEVADE 609
+E D + H L A L +S LD +R S + DE
Sbjct: 235 LSIEAKDLI------HQLLRRNPADRLSLSSVLDHPFMSRNSSTKSKDE 277
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 81/295 (27%), Positives = 134/295 (45%), Gaps = 39/295 (13%)
Query: 335 DNLIGTGGFGEVFKGILDDGTVTAIKRAKLGNTKGTDL-----VLNEVRILCQVNHRSLV 389
+ +IG G FG V+ G L D I A + TD+ L E I+ +H +++
Sbjct: 33 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 92
Query: 390 RLLGCCVELDQT-LMIYEYIPNGTLFDHLHCDFTGKWPPLPWHLRLV-IAHQIAEGLTYL 447
LLG C+ + + L++ Y+ +G L + + + P L+ Q+A+G+ YL
Sbjct: 93 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHN-----PTVKDLIGFGLQVAKGMKYL 147
Query: 448 HSAAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDSHIFTTAQGTMGYLDP 507
S HRD+ + N +LDEK KV+DFGL+R + E H T A+ + ++
Sbjct: 148 ASKK---FVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMAL 204
Query: 508 EYYRNFQLTDKSDVYSFGVVLLELLTSKKAIDFNREEENVNLVVYMKKIMDEERLME--- 564
E + + T KSDV+SFGV+L EL+T + + ++ VY+ + RL++
Sbjct: 205 ESLQTQKFTTKSDVWSFGVLLWELMT--RGAPPYPDVNTFDITVYL---LQGRRLLQPEY 259
Query: 565 VVDPVLKERATHLDLETMKALGLLAASCLDERRQNRPSMKEVADEIEYIISIAKG 619
DP+ + + C + + RPS E+ I I S G
Sbjct: 260 CPDPLYE----------------VMLKCWHPKAEMRPSFSELVSRISAIFSTFIG 298
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 62/206 (30%), Positives = 96/206 (46%), Gaps = 15/206 (7%)
Query: 338 IGTGGFGEVFKGILDDGTVTAIKRAKLGNTKGTDLVLNEVRILC---QVNHRSLVRLLGC 394
+G G +GEV + + T A+ + + D N + +C +NH ++V+ G
Sbjct: 14 LGEGAYGEVQLAV-NRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGH 72
Query: 395 CVELDQTLMIYEYIPNGTLFDHLHCDFTGKWPPLPWHLRLVIAHQIAEGLTYLHSAAVPP 454
E + + EY G LFD + D P P R HQ+ G+ YLH
Sbjct: 73 RREGNIQYLFLEYCSGGELFDRIEPDIGM---PEPDAQRFF--HQLMAGVVYLHGIG--- 124
Query: 455 IYHRDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDSHIFTTAQGTMGYLDPEYYRNFQ 514
I HRD+K N+LLDE+ N K+SDFGL+ + N + GT+ Y+ PE + +
Sbjct: 125 ITHRDIKPENLLLDERDNLKISDFGLATVFRY--NNRERLLNKMXGTLPYVAPELLKRRE 182
Query: 515 L-TDKSDVYSFGVVLLELLTSKKAID 539
+ DV+S G+VL +L + D
Sbjct: 183 FHAEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 81/295 (27%), Positives = 134/295 (45%), Gaps = 39/295 (13%)
Query: 335 DNLIGTGGFGEVFKGILDDGTVTAIKRAKLGNTKGTDL-----VLNEVRILCQVNHRSLV 389
+ +IG G FG V+ G L D I A + TD+ L E I+ +H +++
Sbjct: 30 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 89
Query: 390 RLLGCCVELDQT-LMIYEYIPNGTLFDHLHCDFTGKWPPLPWHLRLV-IAHQIAEGLTYL 447
LLG C+ + + L++ Y+ +G L + + + P L+ Q+A+G+ YL
Sbjct: 90 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHN-----PTVKDLIGFGLQVAKGMKYL 144
Query: 448 HSAAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDSHIFTTAQGTMGYLDP 507
S HRD+ + N +LDEK KV+DFGL+R + E H T A+ + ++
Sbjct: 145 ASKK---FVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMAL 201
Query: 508 EYYRNFQLTDKSDVYSFGVVLLELLTSKKAIDFNREEENVNLVVYMKKIMDEERLME--- 564
E + + T KSDV+SFGV+L EL+T + + ++ VY+ + RL++
Sbjct: 202 ESLQTQKFTTKSDVWSFGVLLWELMT--RGAPPYPDVNTFDITVYL---LQGRRLLQPEY 256
Query: 565 VVDPVLKERATHLDLETMKALGLLAASCLDERRQNRPSMKEVADEIEYIISIAKG 619
DP+ + + C + + RPS E+ I I S G
Sbjct: 257 CPDPLYE----------------VMLKCWHPKAEMRPSFSELVSRISAIFSTFIG 295
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 81/295 (27%), Positives = 134/295 (45%), Gaps = 39/295 (13%)
Query: 335 DNLIGTGGFGEVFKGILDDGTVTAIKRAKLGNTKGTDL-----VLNEVRILCQVNHRSLV 389
+ +IG G FG V+ G L D I A + TD+ L E I+ +H +++
Sbjct: 35 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 94
Query: 390 RLLGCCVELDQT-LMIYEYIPNGTLFDHLHCDFTGKWPPLPWHLRLV-IAHQIAEGLTYL 447
LLG C+ + + L++ Y+ +G L + + + P L+ Q+A+G+ YL
Sbjct: 95 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHN-----PTVKDLIGFGLQVAKGMKYL 149
Query: 448 HSAAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDSHIFTTAQGTMGYLDP 507
S HRD+ + N +LDEK KV+DFGL+R + E H T A+ + ++
Sbjct: 150 ASKK---FVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMAL 206
Query: 508 EYYRNFQLTDKSDVYSFGVVLLELLTSKKAIDFNREEENVNLVVYMKKIMDEERLME--- 564
E + + T KSDV+SFGV+L EL+T + + ++ VY+ + RL++
Sbjct: 207 ESLQTQKFTTKSDVWSFGVLLWELMT--RGAPPYPDVNTFDITVYL---LQGRRLLQPEY 261
Query: 565 VVDPVLKERATHLDLETMKALGLLAASCLDERRQNRPSMKEVADEIEYIISIAKG 619
DP+ + + C + + RPS E+ I I S G
Sbjct: 262 CPDPLYE----------------VMLKCWHPKAEMRPSFSELVSRISAIFSTFIG 300
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 81/295 (27%), Positives = 134/295 (45%), Gaps = 39/295 (13%)
Query: 335 DNLIGTGGFGEVFKGILDDGTVTAIKRAKLGNTKGTDL-----VLNEVRILCQVNHRSLV 389
+ +IG G FG V+ G L D I A + TD+ L E I+ +H +++
Sbjct: 34 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 93
Query: 390 RLLGCCVELDQT-LMIYEYIPNGTLFDHLHCDFTGKWPPLPWHLRLV-IAHQIAEGLTYL 447
LLG C+ + + L++ Y+ +G L + + + P L+ Q+A+G+ YL
Sbjct: 94 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHN-----PTVKDLIGFGLQVAKGMKYL 148
Query: 448 HSAAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDSHIFTTAQGTMGYLDP 507
S HRD+ + N +LDEK KV+DFGL+R + E H T A+ + ++
Sbjct: 149 ASKK---FVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMAL 205
Query: 508 EYYRNFQLTDKSDVYSFGVVLLELLTSKKAIDFNREEENVNLVVYMKKIMDEERLME--- 564
E + + T KSDV+SFGV+L EL+T + + ++ VY+ + RL++
Sbjct: 206 ESLQTQKFTTKSDVWSFGVLLWELMT--RGAPPYPDVNTFDITVYL---LQGRRLLQPEY 260
Query: 565 VVDPVLKERATHLDLETMKALGLLAASCLDERRQNRPSMKEVADEIEYIISIAKG 619
DP+ + + C + + RPS E+ I I S G
Sbjct: 261 CPDPLYE----------------VMLKCWHPKAEMRPSFSELVSRISAIFSTFIG 299
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 64/234 (27%), Positives = 106/234 (45%), Gaps = 39/234 (16%)
Query: 330 NNFSKDNLIGTGGFGEVFK----GILDDGTVTAIKRAKLGNTKGTDLVLN---EVRILCQ 382
NN IG G FG VF+ G+L T + L D+ + E ++ +
Sbjct: 47 NNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAE 106
Query: 383 VNHRSLVRLLGCCVELDQTLMIYEYIPNGTLFDHL------------HCDFTGKW----- 425
++ ++V+LLG C +++EY+ G L + L H D + +
Sbjct: 107 FDNPNIVKLLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSP 166
Query: 426 --PPLPWHLRLVIAHQIAEGLTYLHSAAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRL 483
PPL +L IA Q+A G+ YL HRD+ + N L+ E + K++DFGLSR
Sbjct: 167 GPPPLSCAEQLCIARQVAAGMAYLSERK---FVHRDLATRNCLVGENMVVKIADFGLSRN 223
Query: 484 VERTETNDSHIFTTAQGT----MGYLDPEYYRNFQLTDKSDVYSFGVVLLELLT 533
+ + + A G + ++ PE + T +SDV+++GVVL E+ +
Sbjct: 224 IYSAD------YYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFS 271
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 60/202 (29%), Positives = 102/202 (50%), Gaps = 17/202 (8%)
Query: 338 IGTGGFGEVFKGILDDGTVTAIKRAKLGNTKGTDLVLNEVRILCQVNHRSLVRLLGCCVE 397
+GTG FG V G AIK K G+ D + E +++ ++H LV+L G C +
Sbjct: 17 LGTGQFGVVKYGKWRGQYDVAIKMIKEGSM-SEDEFIEEAKVMMNLSHEKLVQLYGVCTK 75
Query: 398 LDQTLMIYEYIPNGTLFDHLHCDFTGKWPPLPWHLRLVIAHQIAEGLTYLHSAAVPPIYH 457
+I EY+ NG L ++L + ++ L + + E + YL S H
Sbjct: 76 QRPIFIITEYMANGCLLNYLR-EMRHRFQT---QQLLEMCKDVCEAMEYLESKQ---FLH 128
Query: 458 RDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDSHIFTTAQGT---MGYLDPEYYRNFQ 514
RD+ + N L++++ KVSDFGLSR V E +T+++G+ + + PE +
Sbjct: 129 RDLAARNCLVNDQGVVKVSDFGLSRYVLDDE------YTSSRGSKFPVRWSPPEVLMYSK 182
Query: 515 LTDKSDVYSFGVVLLELLTSKK 536
+ KSD+++FGV++ E+ + K
Sbjct: 183 FSSKSDIWAFGVLMWEIYSLGK 204
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 111/215 (51%), Gaps = 26/215 (12%)
Query: 330 NNFSKDNLIGTGGFGEVFKGI-LDDGTVT----AIKRAKLGNT-KGTDLVLNEVRILCQV 383
F K ++G+G FG V+KG+ + +G AIK + + K +L+E ++ V
Sbjct: 16 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 75
Query: 384 NHRSLVRLLGCCVELDQTLMIYEYIPNGTLFDHL--HCDFTGKWPPLPWHLRLVIAHQIA 441
++ + RLLG C+ +I + +P G L D++ H D G L W + QIA
Sbjct: 76 DNPHVCRLLGICLT-STVQLIMQLMPFGXLLDYVREHKDNIGSQYLLNWCV------QIA 128
Query: 442 EGLTYLHSAAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDSHIFTTAQG- 500
+G+ YL + HRD+ + N+L+ + K++DFGL++L+ E + H A+G
Sbjct: 129 KGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLL-GAEEKEYH----AEGG 180
Query: 501 --TMGYLDPEYYRNFQLTDKSDVYSFGVVLLELLT 533
+ ++ E + T +SDV+S+GV + EL+T
Sbjct: 181 KVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 215
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 65/224 (29%), Positives = 112/224 (50%), Gaps = 27/224 (12%)
Query: 318 RIFTGKEIRRATNNFSKDNLIGTGGFGEVFKGI-LDDG----TVTAIKRAKLGNT-KGTD 371
RI E+R+ ++G+G FG V+KGI + DG AIK + + K
Sbjct: 12 RILKETELRKV-------KVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANK 64
Query: 372 LVLNEVRILCQVNHRSLVRLLGCCVELDQTLMIYEYIPNGTLFDHLHCDF--TGKWPPLP 429
+L+E ++ V + RLLG C+ ++ + +P G L DH+ + G L
Sbjct: 65 EILDEAYVMAGVGSPYVSRLLGICLT-STVQLVTQLMPYGCLLDHVRENRGRLGSQDLLN 123
Query: 430 WHLRLVIAHQIAEGLTYLHSAAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVERTET 489
W + QIA+G++YL + HRD+ + N+L+ + K++DFGL+RL++ ET
Sbjct: 124 WCM------QIAKGMSYLEDVR---LVHRDLAARNVLVKSPNHVKITDFGLARLLDIDET 174
Query: 490 NDSHIFTTAQGTMGYLDPEYYRNFQLTDKSDVYSFGVVLLELLT 533
+ + + ++ E + T +SDV+S+GV + EL+T
Sbjct: 175 E--YHADGGKVPIKWMALESILRRRFTHQSDVWSYGVTVWELMT 216
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 63/206 (30%), Positives = 96/206 (46%), Gaps = 15/206 (7%)
Query: 338 IGTGGFGEVFKGILDDGTVTAIKRAKLGNTKGTDLVLN---EVRILCQVNHRSLVRLLGC 394
+G G +GEV + + T A+ + + D N E+ I +NH ++V+ G
Sbjct: 14 LGEGAYGEVQLAV-NRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHENVVKFYGH 72
Query: 395 CVELDQTLMIYEYIPNGTLFDHLHCDFTGKWPPLPWHLRLVIAHQIAEGLTYLHSAAVPP 454
E + + EY G LFD + D P P R HQ+ G+ YLH
Sbjct: 73 RREGNIQYLFLEYCSGGELFDRIEPDIGM---PEPDAQRFF--HQLMAGVVYLHGIG--- 124
Query: 455 IYHRDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDSHIFTTAQGTMGYLDPEYYRNFQ 514
I HRD+K N+LLDE+ N K+SDFGL+ + N + GT+ Y+ PE + +
Sbjct: 125 ITHRDIKPENLLLDERDNLKISDFGLATVFRY--NNRERLLNKMCGTLPYVAPELLKRRE 182
Query: 515 L-TDKSDVYSFGVVLLELLTSKKAID 539
+ DV+S G+VL +L + D
Sbjct: 183 FHAEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 69/213 (32%), Positives = 97/213 (45%), Gaps = 36/213 (16%)
Query: 338 IGTGGFGEVFKGILD---DGTVTAIKRAKLGNTKGTDL---VLNEVRILCQVNHRSLVRL 391
+G G FG+V D DGT + L G L E+ IL + H +V+
Sbjct: 17 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKEGCGPQLRSGWQREIEILRTLYHEHIVKY 76
Query: 392 LGCCVELDQ--TLMIYEYIPNGTLFDHL--HCDFTGKWPPLPWHLRLVIAHQIAEGLTYL 447
GCC + + ++ EY+P G+L D+L HC + L+ A QI EG+ YL
Sbjct: 77 KGCCEDQGEKSVQLVMEYVPLGSLRDYLPRHCVGLAQL--------LLFAQQICEGMAYL 128
Query: 448 HSAAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVER-------TETNDSHIFTTAQG 500
H+ HR + + N+LLD K+ DFGL++ V E DS +F A
Sbjct: 129 HAQHY---IHRALAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYA-- 183
Query: 501 TMGYLDPEYYRNFQLTDKSDVYSFGVVLLELLT 533
PE + + SDV+SFGV L ELLT
Sbjct: 184 ------PECLKECKFYYASDVWSFGVTLYELLT 210
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 62/206 (30%), Positives = 96/206 (46%), Gaps = 15/206 (7%)
Query: 338 IGTGGFGEVFKGILDDGTVTAIKRAKLGNTKGTDLVLNEVRILC---QVNHRSLVRLLGC 394
+G G +GEV + + T A+ + + D N + +C +NH ++V+ G
Sbjct: 15 LGEGAYGEVQLAV-NRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGH 73
Query: 395 CVELDQTLMIYEYIPNGTLFDHLHCDFTGKWPPLPWHLRLVIAHQIAEGLTYLHSAAVPP 454
E + + EY G LFD + D P P R HQ+ G+ YLH
Sbjct: 74 RREGNIQYLFLEYCSGGELFDRIEPDIGM---PEPDAQRFF--HQLMAGVVYLHGIG--- 125
Query: 455 IYHRDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDSHIFTTAQGTMGYLDPEYYRNFQ 514
I HRD+K N+LLDE+ N K+SDFGL+ + N + GT+ Y+ PE + +
Sbjct: 126 ITHRDIKPENLLLDERDNLKISDFGLATVFRY--NNRERLLNKMCGTLPYVAPELLKRRE 183
Query: 515 L-TDKSDVYSFGVVLLELLTSKKAID 539
+ DV+S G+VL +L + D
Sbjct: 184 FHAEPVDVWSCGIVLTAMLAGELPWD 209
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 80/295 (27%), Positives = 135/295 (45%), Gaps = 39/295 (13%)
Query: 335 DNLIGTGGFGEVFKGILDDGTVTAIKRAKLGNTKGTDL-----VLNEVRILCQVNHRSLV 389
+ +IG G FG V+ G L D I A + TD+ L E I+ +H +++
Sbjct: 35 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 94
Query: 390 RLLGCCVELDQT-LMIYEYIPNGTLFDHLHCDFTGKWPPLPWHLRLV-IAHQIAEGLTYL 447
LLG C+ + + L++ Y+ +G L + + + P L+ Q+A+G+ +L
Sbjct: 95 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHN-----PTVKDLIGFGLQVAKGMKFL 149
Query: 448 HSAAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDSHIFTTAQGTMGYLDP 507
S HRD+ + N +LDEK KV+DFGL+R + E + H T A+ + ++
Sbjct: 150 ASKK---FVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMAL 206
Query: 508 EYYRNFQLTDKSDVYSFGVVLLELLTSKKAIDFNREEENVNLVVYMKKIMDEERLME--- 564
E + + T KSDV+SFGV+L EL+T + + ++ VY+ + RL++
Sbjct: 207 ESLQTQKFTTKSDVWSFGVLLWELMT--RGAPPYPDVNTFDITVYL---LQGRRLLQPEY 261
Query: 565 VVDPVLKERATHLDLETMKALGLLAASCLDERRQNRPSMKEVADEIEYIISIAKG 619
DP+ + + C + + RPS E+ I I S G
Sbjct: 262 CPDPLYE----------------VMLKCWHPKAEMRPSFSELVSRISAIFSTFIG 300
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 68/230 (29%), Positives = 111/230 (48%), Gaps = 14/230 (6%)
Query: 308 LNAKAAGKSARIFTGK-EIRRATNNFSKDNLIGTGGFGEVFKGILDDGTVTAIKRAKLGN 366
L +K A +A + G EI F K+ +GTG FG V G AIK K G+
Sbjct: 3 LGSKNAPSTAGLGYGSWEIDPKDLTFLKE--LGTGQFGVVKYGKWRGQYDVAIKMIKEGS 60
Query: 367 TKGTDLVLNEVRILCQVNHRSLVRLLGCCVELDQTLMIYEYIPNGTLFDHLHCDFTGKWP 426
D + E +++ ++H LV+L G C + +I EY+ NG L ++L + ++
Sbjct: 61 M-SEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLR-EMRHRFQ 118
Query: 427 PLPWHLRLVIAHQIAEGLTYLHSAAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVER 486
L + + E + YL S HRD+ + N L++++ KVSDFGLSR V
Sbjct: 119 T---QQLLEMCKDVCEAMEYLESKQ---FLHRDLAARNCLVNDQGVVKVSDFGLSRYVLD 172
Query: 487 TETNDSHIFTTAQGTMGYLDPEYYRNFQLTDKSDVYSFGVVLLELLTSKK 536
E S ++ + + PE + + KSD+++FGV++ E+ + K
Sbjct: 173 DEETSS---VGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGK 219
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 62/206 (30%), Positives = 96/206 (46%), Gaps = 15/206 (7%)
Query: 338 IGTGGFGEVFKGILDDGTVTAIKRAKLGNTKGTDLVLNEVRILC---QVNHRSLVRLLGC 394
+G G +GEV + + T A+ + + D N + +C +NH ++V+ G
Sbjct: 14 LGEGAYGEVQLAV-NRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGH 72
Query: 395 CVELDQTLMIYEYIPNGTLFDHLHCDFTGKWPPLPWHLRLVIAHQIAEGLTYLHSAAVPP 454
E + + EY G LFD + D P P R HQ+ G+ YLH
Sbjct: 73 RREGNIQYLFLEYCSGGELFDRIEPDIGM---PEPDAQRFF--HQLMAGVVYLHGIG--- 124
Query: 455 IYHRDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDSHIFTTAQGTMGYLDPEYYRNFQ 514
I HRD+K N+LLDE+ N K+SDFGL+ + N + GT+ Y+ PE + +
Sbjct: 125 ITHRDIKPENLLLDERDNLKISDFGLATVFRY--NNRERLLNKMCGTLPYVAPELLKRRE 182
Query: 515 L-TDKSDVYSFGVVLLELLTSKKAID 539
+ DV+S G+VL +L + D
Sbjct: 183 FHAEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 67/197 (34%), Positives = 98/197 (49%), Gaps = 17/197 (8%)
Query: 338 IGTGGFGEVFKGILDDGTVTAIKRAKLGNTKGTDLVLNEVRILCQVNHRSLVRLLGCCVE 397
IG G FG+V G G A+K K N L E ++ Q+ H +LV+LLG VE
Sbjct: 29 IGKGEFGDVMLGDYR-GNKVAVKCIK--NDATAQAFLAEASVMTQLRHSNLVQLLGVIVE 85
Query: 398 LDQTLMIY-EYIPNGTLFDHLHCDFTGKWPPLPWHLRLVIAHQIAEGLTYLHSAAVPPIY 456
L I EY+ G+L D+L G+ L L + + E + YL
Sbjct: 86 EKGGLYIVTEYMAKGSLVDYLRS--RGR-SVLGGDCLLKFSLDVCEAMEYLEGNN---FV 139
Query: 457 HRDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDSHIFTTAQGTMGYLDPEYYRNFQLT 516
HRD+ + N+L+ E AKVSDFGL++ E + T D T + + + PE R + +
Sbjct: 140 HRDLAARNVLVSEDNVAKVSDFGLTK--EASSTQD-----TGKLPVKWTAPEALREKKFS 192
Query: 517 DKSDVYSFGVVLLELLT 533
KSDV+SFG++L E+ +
Sbjct: 193 TKSDVWSFGILLWEIYS 209
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 80/295 (27%), Positives = 135/295 (45%), Gaps = 39/295 (13%)
Query: 335 DNLIGTGGFGEVFKGILDDGTVTAIKRAKLGNTKGTDL-----VLNEVRILCQVNHRSLV 389
+ +IG G FG V+ G L D I A + TD+ L E I+ +H +++
Sbjct: 40 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 99
Query: 390 RLLGCCVELDQT-LMIYEYIPNGTLFDHLHCDFTGKWPPLPWHLRLV-IAHQIAEGLTYL 447
LLG C+ + + L++ Y+ +G L + + + P L+ Q+A+G+ +L
Sbjct: 100 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHN-----PTVKDLIGFGLQVAKGMKFL 154
Query: 448 HSAAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDSHIFTTAQGTMGYLDP 507
S HRD+ + N +LDEK KV+DFGL+R + E + H T A+ + ++
Sbjct: 155 ASKK---FVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMAL 211
Query: 508 EYYRNFQLTDKSDVYSFGVVLLELLTSKKAIDFNREEENVNLVVYMKKIMDEERLME--- 564
E + + T KSDV+SFGV+L EL+T + + ++ VY+ + RL++
Sbjct: 212 ESLQTQKFTTKSDVWSFGVLLWELMT--RGAPPYPDVNTFDITVYL---LQGRRLLQPEY 266
Query: 565 VVDPVLKERATHLDLETMKALGLLAASCLDERRQNRPSMKEVADEIEYIISIAKG 619
DP+ + + C + + RPS E+ I I S G
Sbjct: 267 CPDPLYE----------------VMLKCWHPKAEMRPSFSELVSRISAIFSTFIG 305
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 62/206 (30%), Positives = 96/206 (46%), Gaps = 15/206 (7%)
Query: 338 IGTGGFGEVFKGILDDGTVTAIKRAKLGNTKGTDLVLNEVRILC---QVNHRSLVRLLGC 394
+G G +GEV + + T A+ + + D N + +C +NH ++V+ G
Sbjct: 15 LGEGAYGEVQLAV-NRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGH 73
Query: 395 CVELDQTLMIYEYIPNGTLFDHLHCDFTGKWPPLPWHLRLVIAHQIAEGLTYLHSAAVPP 454
E + + EY G LFD + D P P R HQ+ G+ YLH
Sbjct: 74 RREGNIQYLFLEYCSGGELFDRIEPDIGM---PEPDAQRFF--HQLMAGVVYLHGIG--- 125
Query: 455 IYHRDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDSHIFTTAQGTMGYLDPEYYRNFQ 514
I HRD+K N+LLDE+ N K+SDFGL+ + N + GT+ Y+ PE + +
Sbjct: 126 ITHRDIKPENLLLDERDNLKISDFGLATVFRY--NNRERLLNKMCGTLPYVAPELLKRRE 183
Query: 515 L-TDKSDVYSFGVVLLELLTSKKAID 539
+ DV+S G+VL +L + D
Sbjct: 184 FHAEPVDVWSCGIVLTAMLAGELPWD 209
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 62/206 (30%), Positives = 96/206 (46%), Gaps = 15/206 (7%)
Query: 338 IGTGGFGEVFKGILDDGTVTAIKRAKLGNTKGTDLVLNEVRILC---QVNHRSLVRLLGC 394
+G G +GEV + + T A+ + + D N + +C +NH ++V+ G
Sbjct: 15 LGEGAYGEVQLAV-NRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGH 73
Query: 395 CVELDQTLMIYEYIPNGTLFDHLHCDFTGKWPPLPWHLRLVIAHQIAEGLTYLHSAAVPP 454
E + + EY G LFD + D P P R HQ+ G+ YLH
Sbjct: 74 RREGNIQYLFLEYCSGGELFDRIEPDIGM---PEPDAQRFF--HQLMAGVVYLHGIG--- 125
Query: 455 IYHRDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDSHIFTTAQGTMGYLDPEYYRNFQ 514
I HRD+K N+LLDE+ N K+SDFGL+ + N + GT+ Y+ PE + +
Sbjct: 126 ITHRDIKPENLLLDERDNLKISDFGLATVFRY--NNRERLLNKMCGTLPYVAPELLKRRE 183
Query: 515 L-TDKSDVYSFGVVLLELLTSKKAID 539
+ DV+S G+VL +L + D
Sbjct: 184 FHAEPVDVWSCGIVLTAMLAGELPWD 209
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 69/213 (32%), Positives = 97/213 (45%), Gaps = 36/213 (16%)
Query: 338 IGTGGFGEVFKGILD---DGTVTAIKRAKLGNTKGTDL---VLNEVRILCQVNHRSLVRL 391
+G G FG+V D DGT + L G L E+ IL + H +V+
Sbjct: 16 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKEGCGPQLRSGWQREIEILRTLYHEHIVKY 75
Query: 392 LGCCVELDQ--TLMIYEYIPNGTLFDHL--HCDFTGKWPPLPWHLRLVIAHQIAEGLTYL 447
GCC + + ++ EY+P G+L D+L HC + L+ A QI EG+ YL
Sbjct: 76 KGCCEDQGEKSVQLVMEYVPLGSLRDYLPRHCVGLAQL--------LLFAQQICEGMAYL 127
Query: 448 HSAAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVER-------TETNDSHIFTTAQG 500
H+ HR + + N+LLD K+ DFGL++ V E DS +F A
Sbjct: 128 HAQHY---IHRALAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYA-- 182
Query: 501 TMGYLDPEYYRNFQLTDKSDVYSFGVVLLELLT 533
PE + + SDV+SFGV L ELLT
Sbjct: 183 ------PECLKECKFYYASDVWSFGVTLYELLT 209
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 62/212 (29%), Positives = 109/212 (51%), Gaps = 20/212 (9%)
Query: 330 NNFSKDNLIGTGGFGEVFKGI-LDDGTVT----AIKRAKLGNT-KGTDLVLNEVRILCQV 383
F K ++G+G FG V+KG+ + +G AIK + + K +L+E ++ V
Sbjct: 19 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 78
Query: 384 NHRSLVRLLGCCVELDQTLMIYEYIPNGTLFDHL--HCDFTGKWPPLPWHLRLVIAHQIA 441
++ + RLLG C+ +I + +P G L D++ H D G L W + QIA
Sbjct: 79 DNPHVCRLLGICLT-STVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCV------QIA 131
Query: 442 EGLTYLHSAAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDSHIFTTAQGT 501
+G+ YL + HRD+ + N+L+ + K++DFGL++L+ E + H +
Sbjct: 132 KGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLL-GAEEKEYHA-EGGKVP 186
Query: 502 MGYLDPEYYRNFQLTDKSDVYSFGVVLLELLT 533
+ ++ E + T +SDV+S+GV + EL+T
Sbjct: 187 IKWMALESILHRIYTHQSDVWSYGVTVWELMT 218
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 62/206 (30%), Positives = 96/206 (46%), Gaps = 15/206 (7%)
Query: 338 IGTGGFGEVFKGILDDGTVTAIKRAKLGNTKGTDLVLNEVRILC---QVNHRSLVRLLGC 394
+G G +GEV + + T A+ + + D N + +C +NH ++V+ G
Sbjct: 15 LGEGAYGEVQLAV-NRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGH 73
Query: 395 CVELDQTLMIYEYIPNGTLFDHLHCDFTGKWPPLPWHLRLVIAHQIAEGLTYLHSAAVPP 454
E + + EY G LFD + D P P R HQ+ G+ YLH
Sbjct: 74 RREGNIQYLFLEYCSGGELFDRIEPDIGM---PEPDAQRFF--HQLMAGVVYLHGIG--- 125
Query: 455 IYHRDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDSHIFTTAQGTMGYLDPEYYRNFQ 514
I HRD+K N+LLDE+ N K+SDFGL+ + N + GT+ Y+ PE + +
Sbjct: 126 ITHRDIKPENLLLDERDNLKISDFGLATVFRY--NNRERLLNKMCGTLPYVAPELLKRRE 183
Query: 515 L-TDKSDVYSFGVVLLELLTSKKAID 539
+ DV+S G+VL +L + D
Sbjct: 184 FHAEPVDVWSCGIVLTAMLAGELPWD 209
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 82/289 (28%), Positives = 139/289 (48%), Gaps = 37/289 (12%)
Query: 335 DNLIGTGGFGEVFKGILD----DGTVTAIKRAKLGNT-KGTDLVLNEVRILCQVNHRSLV 389
+ +IG G FGEV G L AIK K G T K L+E I+ Q +H +++
Sbjct: 12 EQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNVI 71
Query: 390 RLLGCCVELDQTLMIYEYIPNGTLFDHLHCDFTGKWPPLPWHLRLV-IAHQIAEGLTYLH 448
L G + ++I E++ NG+L L + G++ + +LV + IA G+ YL
Sbjct: 72 HLEGVVTKSTPVMIITEFMENGSLDSFLRQN-DGQFTVI----QLVGMLRGIAAGMKYL- 125
Query: 449 SAAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDSHIFTTAQGT---MGYL 505
A HR + + NIL++ L KVSDFGLSR +E +T+D +T+A G + +
Sbjct: 126 --ADMNYVHRALAARNILVNSNLVCKVSDFGLSRFLE-DDTSDP-TYTSALGGKIPIRWT 181
Query: 506 DPEYYRNFQLTDKSDVYSFGVVLLELLTSKKAIDFNREEENVNLVVYMKKIMDEERLMEV 565
PE + + T SDV+S+G+V+ E+++ + ++ ++V + I + RL
Sbjct: 182 APEAIQYRKFTSASDVWSYGIVMWEVMSYGERPYWDMTNQDV-----INAIEQDYRLPPP 236
Query: 566 VDPVLKERATHLDLETMKALGLLAASCLDERRQNRPSMKEVADEIEYII 614
+D AL L C + R +RP ++ + ++ +I
Sbjct: 237 MD-------------CPSALHQLMLDCWQKDRNHRPKFGQIVNTLDKMI 272
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 82.8 bits (203), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 71/226 (31%), Positives = 113/226 (50%), Gaps = 18/226 (7%)
Query: 314 GKSARIFTGKEIRRATNNFSKDNLIGTGGFGEVFKGIL----DDGTVTAIKRAKLGNTKG 369
G++ R FT +EI + + K +IG+G GEV G L AIK K G T+
Sbjct: 36 GRAGRSFT-REIEASRIHIEK--IIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTER 92
Query: 370 TDL-VLNEVRILCQVNHRSLVRLLGCCVELDQTLMIYEYIPNGTLFDHLHCDFTGKWPPL 428
L+E I+ Q +H +++RL G +++ EY+ NG+L D G++ +
Sbjct: 93 QRRDFLSEASIMGQFDHPNIIRLEGVVTRGRLAMIVTEYMENGSL-DTFLRTHDGQFTIM 151
Query: 429 PWHLRLV-IAHQIAEGLTYLHSAAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVERT 487
+LV + + G+ YL HRD+ + N+L+D L KVSDFGLSR++E
Sbjct: 152 ----QLVGMLRGVGAGMRYLSDLGY---VHRDLAARNVLVDSNLVCKVSDFGLSRVLE-D 203
Query: 488 ETNDSHIFTTAQGTMGYLDPEYYRNFQLTDKSDVYSFGVVLLELLT 533
+ + + T + + + PE + SDV+SFGVV+ E+L
Sbjct: 204 DPDAAXTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLA 249
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 82.8 bits (203), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 64/208 (30%), Positives = 107/208 (51%), Gaps = 19/208 (9%)
Query: 335 DNLIGTGGFGEVFKGILD----DGTVTAIKRAKLGNT-KGTDLVLNEVRILCQVNHRSLV 389
+ +IG G FGEV +G L + AIK K G T + L+E I+ Q H +++
Sbjct: 21 EEVIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSEASIMGQFEHPNII 80
Query: 390 RLLGCCVELDQTLMIYEYIPNGTLFDHLHCDFTGKWPPLPWHLRLV-IAHQIAEGLTYLH 448
RL G +++ E++ NG L L + G++ + +LV + IA G+ YL
Sbjct: 81 RLEGVVTNSMPVMILTEFMENGALDSFLRLN-DGQFTVI----QLVGMLRGIASGMRYLA 135
Query: 449 SAAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDSHIFTTAQG---TMGYL 505
+ HRD+ + NIL++ L KVSDFGLSR +E ++ + T++ G + +
Sbjct: 136 EMSY---VHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTE--TSSLGGKIPIRWT 190
Query: 506 DPEYYRNFQLTDKSDVYSFGVVLLELLT 533
PE + T SD +S+G+V+ E+++
Sbjct: 191 APEAIAFRKFTSASDAWSYGIVMWEVMS 218
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 82.8 bits (203), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 64/203 (31%), Positives = 100/203 (49%), Gaps = 17/203 (8%)
Query: 332 FSKDNLIGTGGFGEVFKGILDDGT--VTAIKRAKLGNTKGTDLVLN-EVRILCQVNHRSL 388
F+K IG G FGEVFKGI D+ T V AIK L + + E+ +L Q + +
Sbjct: 9 FTKLEKIGKGSFGEVFKGI-DNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYV 67
Query: 389 VRLLGCCVELDQTLMIYEYIPNGTLFDHLHCDFTGKWPPLPWHLRLVIAHQIAEGLTYLH 448
+ G ++ + +I EY+ G+ D L PL I +I +GL YLH
Sbjct: 68 TKYYGSYLKDTKLWIIMEYLGGGSALDLLEPG------PLDETQIATILREILKGLDYLH 121
Query: 449 SAAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDSHIFTTAQGTMGYLDPE 508
S HRD+K++N+LL E K++DFG++ + T+ + T GT ++ PE
Sbjct: 122 SEKK---IHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRN----TFVGTPFWMAPE 174
Query: 509 YYRNFQLTDKSDVYSFGVVLLEL 531
+ K+D++S G+ +EL
Sbjct: 175 VIKQSAYDSKADIWSLGITAIEL 197
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 82.4 bits (202), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 66/204 (32%), Positives = 97/204 (47%), Gaps = 23/204 (11%)
Query: 338 IGTGGFGEVFKGILD-DGTVTAIKRAKLGNTKGTDL---VLNEVRILCQVNHRSLVRLLG 393
IG G FGEVF G L D T+ A+K + T DL L E RIL Q +H ++VRL+G
Sbjct: 122 IGRGNFGEVFSGRLRADNTLVAVKSCR--ETLPPDLKAKFLQEARILKQYSHPNIVRLIG 179
Query: 394 CCVELDQTLMIYEYIPNGTLFDHLHCDFTGKWPPLPWHLRLVIAHQI----AEGLTYLHS 449
C + ++ E + G L + LR+ Q+ A G+ YL S
Sbjct: 180 VCTQKQPIYIVMELVQGGDFLTFLRTEGA--------RLRVKTLLQMVGDAAAGMEYLES 231
Query: 450 AAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDSHIFTTAQGTMGYLDPEY 509
HRD+ + N L+ EK K+SDFG+SR E + + Q + + PE
Sbjct: 232 KCC---IHRDLAARNCLVTEKNVLKISDFGMSR--EEADGVYAASGGLRQVPVKWTAPEA 286
Query: 510 YRNFQLTDKSDVYSFGVVLLELLT 533
+ + +SDV+SFG++L E +
Sbjct: 287 LNYGRYSSESDVWSFGILLWETFS 310
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 82.4 bits (202), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 65/206 (31%), Positives = 106/206 (51%), Gaps = 15/206 (7%)
Query: 335 DNLIGTGGFGEVFKGILDDGTVTAIKRAKLGNTKGTDL-----VLNEVRILCQVNHRSLV 389
+ +IG G FG V+ G L D I A + TD+ L E I+ +H +++
Sbjct: 33 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 92
Query: 390 RLLGCCVELDQT-LMIYEYIPNGTLFDHLHCDFTGKWPPLPWHLRLV-IAHQIAEGLTYL 447
LLG C+ + + L++ Y+ +G L + + + P L+ Q+A+G+ +L
Sbjct: 93 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHN-----PTVKDLIGFGLQVAKGMKFL 147
Query: 448 HSAAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDSHIFTTAQGTMGYLDP 507
S HRD+ + N +LDEK KV+DFGL+R + E + H T A+ + ++
Sbjct: 148 ASKK---FVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMAL 204
Query: 508 EYYRNFQLTDKSDVYSFGVVLLELLT 533
E + + T KSDV+SFGV+L EL+T
Sbjct: 205 ESLQTQKFTTKSDVWSFGVLLWELMT 230
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 82.4 bits (202), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 62/206 (30%), Positives = 96/206 (46%), Gaps = 15/206 (7%)
Query: 338 IGTGGFGEVFKGILDDGTVTAIKRAKLGNTKGTDLVLNEVRILC---QVNHRSLVRLLGC 394
+G G +GEV + + T A+ + + D N + +C +NH ++V+ G
Sbjct: 15 LGEGAYGEVQLAV-NRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGH 73
Query: 395 CVELDQTLMIYEYIPNGTLFDHLHCDFTGKWPPLPWHLRLVIAHQIAEGLTYLHSAAVPP 454
E + + EY G LFD + D P P R HQ+ G+ YLH
Sbjct: 74 RREGNIQYLFLEYCSGGELFDRIEPDIGM---PEPDAQRFF--HQLMAGVVYLHGIG--- 125
Query: 455 IYHRDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDSHIFTTAQGTMGYLDPEYYRNFQ 514
I HRD+K N+LLDE+ N K+SDFGL+ + N + GT+ Y+ PE + +
Sbjct: 126 ITHRDIKPENLLLDERDNLKISDFGLATVFRY--NNRERLLNKMCGTLPYVAPELLKRRE 183
Query: 515 L-TDKSDVYSFGVVLLELLTSKKAID 539
+ DV+S G+VL +L + D
Sbjct: 184 FHAEPVDVWSCGIVLTAMLAGELPWD 209
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 82.4 bits (202), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 68/230 (29%), Positives = 111/230 (48%), Gaps = 14/230 (6%)
Query: 308 LNAKAAGKSARIFTGK-EIRRATNNFSKDNLIGTGGFGEVFKGILDDGTVTAIKRAKLGN 366
L +K A +A + G EI F K+ +GTG FG V G AIK K G+
Sbjct: 3 LGSKNAPSTAGLGYGSWEIDPKDLTFLKE--LGTGQFGVVKYGKWRGQYDVAIKMIKEGS 60
Query: 367 TKGTDLVLNEVRILCQVNHRSLVRLLGCCVELDQTLMIYEYIPNGTLFDHLHCDFTGKWP 426
D + E +++ ++H LV+L G C + +I EY+ NG L ++L + ++
Sbjct: 61 M-SEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLR-EMRHRFQ 118
Query: 427 PLPWHLRLVIAHQIAEGLTYLHSAAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVER 486
L + + E + YL S HRD+ + N L++++ KVSDFGLSR V
Sbjct: 119 T---QQLLEMCKDVCEAMEYLESKQ---FLHRDLAARNCLVNDQGVVKVSDFGLSRYVLD 172
Query: 487 TETNDSHIFTTAQGTMGYLDPEYYRNFQLTDKSDVYSFGVVLLELLTSKK 536
E S ++ + + PE + + KSD+++FGV++ E+ + K
Sbjct: 173 DEYTSS---VGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGK 219
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 82.4 bits (202), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 80/295 (27%), Positives = 135/295 (45%), Gaps = 39/295 (13%)
Query: 335 DNLIGTGGFGEVFKGILDDGTVTAIKRAKLGNTKGTDL-----VLNEVRILCQVNHRSLV 389
+ +IG G FG V+ G L D I A + TD+ L E I+ +H +++
Sbjct: 35 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 94
Query: 390 RLLGCCVELDQT-LMIYEYIPNGTLFDHLHCDFTGKWPPLPWHLRLV-IAHQIAEGLTYL 447
LLG C+ + + L++ Y+ +G L + + + P L+ Q+A+G+ +L
Sbjct: 95 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHN-----PTVKDLIGFGLQVAKGMKFL 149
Query: 448 HSAAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDSHIFTTAQGTMGYLDP 507
S HRD+ + N +LDEK KV+DFGL+R + E + H T A+ + ++
Sbjct: 150 ASKK---FVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMAL 206
Query: 508 EYYRNFQLTDKSDVYSFGVVLLELLTSKKAIDFNREEENVNLVVYMKKIMDEERLME--- 564
E + + T KSDV+SFGV+L EL+T + + ++ VY+ + RL++
Sbjct: 207 ESLQTQKFTTKSDVWSFGVLLWELMT--RGAPPYPDVNTFDITVYL---LQGRRLLQPEY 261
Query: 565 VVDPVLKERATHLDLETMKALGLLAASCLDERRQNRPSMKEVADEIEYIISIAKG 619
DP+ + + C + + RPS E+ I I S G
Sbjct: 262 CPDPLYE----------------VMLKCWHPKAEMRPSFSELVSRISAIFSTFIG 300
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 82.4 bits (202), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 111/215 (51%), Gaps = 26/215 (12%)
Query: 330 NNFSKDNLIGTGGFGEVFKGI-LDDGTVT----AIKRAKLGNT-KGTDLVLNEVRILCQV 383
F K ++G+G FG V+KG+ + +G AIK + + K +L+E ++ V
Sbjct: 25 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 84
Query: 384 NHRSLVRLLGCCVELDQTLMIYEYIPNGTLFDHL--HCDFTGKWPPLPWHLRLVIAHQIA 441
++ + RLLG C+ +I + +P G L D++ H D G L W + QIA
Sbjct: 85 DNPHVCRLLGICLT-STVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCV------QIA 137
Query: 442 EGLTYLHSAAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDSHIFTTAQG- 500
+G+ YL + HRD+ + N+L+ + K++DFGL++L+ E + H A+G
Sbjct: 138 KGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLG-AEEKEYH----AEGG 189
Query: 501 --TMGYLDPEYYRNFQLTDKSDVYSFGVVLLELLT 533
+ ++ E + T +SDV+S+GV + EL+T
Sbjct: 190 KVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 224
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 82.4 bits (202), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 62/212 (29%), Positives = 109/212 (51%), Gaps = 20/212 (9%)
Query: 330 NNFSKDNLIGTGGFGEVFKGI-LDDGTVT----AIKRAKLGNT-KGTDLVLNEVRILCQV 383
F K ++G+G FG V+KG+ + +G AIK + + K +L+E ++ V
Sbjct: 18 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 77
Query: 384 NHRSLVRLLGCCVELDQTLMIYEYIPNGTLFDHL--HCDFTGKWPPLPWHLRLVIAHQIA 441
++ + RLLG C+ +I + +P G L D++ H D G L W + QIA
Sbjct: 78 DNPHVCRLLGICLT-STVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCV------QIA 130
Query: 442 EGLTYLHSAAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDSHIFTTAQGT 501
+G+ YL + HRD+ + N+L+ + K++DFGL++L+ E + H +
Sbjct: 131 KGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLL-GAEEKEYHA-EGGKVP 185
Query: 502 MGYLDPEYYRNFQLTDKSDVYSFGVVLLELLT 533
+ ++ E + T +SDV+S+GV + EL+T
Sbjct: 186 IKWMALESILHRIYTHQSDVWSYGVTVWELMT 217
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 82.4 bits (202), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 111/215 (51%), Gaps = 26/215 (12%)
Query: 330 NNFSKDNLIGTGGFGEVFKGI-LDDGTVT----AIKRAKLGNT-KGTDLVLNEVRILCQV 383
F K ++G+G FG V+KG+ + +G AIK + + K +L+E ++ V
Sbjct: 15 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 74
Query: 384 NHRSLVRLLGCCVELDQTLMIYEYIPNGTLFDHL--HCDFTGKWPPLPWHLRLVIAHQIA 441
++ + RLLG C+ +I + +P G L D++ H D G L W + QIA
Sbjct: 75 DNPHVCRLLGICLT-STVQLITQLMPFGXLLDYVREHKDNIGSQYLLNWCV------QIA 127
Query: 442 EGLTYLHSAAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDSHIFTTAQG- 500
+G+ YL + HRD+ + N+L+ + K++DFGL++L+ E + H A+G
Sbjct: 128 KGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLL-GAEEKEYH----AEGG 179
Query: 501 --TMGYLDPEYYRNFQLTDKSDVYSFGVVLLELLT 533
+ ++ E + T +SDV+S+GV + EL+T
Sbjct: 180 KVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 214
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 82.4 bits (202), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 62/212 (29%), Positives = 109/212 (51%), Gaps = 20/212 (9%)
Query: 330 NNFSKDNLIGTGGFGEVFKGI-LDDGTVT----AIKRAKLGNT-KGTDLVLNEVRILCQV 383
F K ++G+G FG V+KG+ + +G AIK + + K +L+E ++ V
Sbjct: 17 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 76
Query: 384 NHRSLVRLLGCCVELDQTLMIYEYIPNGTLFDHL--HCDFTGKWPPLPWHLRLVIAHQIA 441
++ + RLLG C+ +I + +P G L D++ H D G L W + QIA
Sbjct: 77 DNPHVCRLLGICLT-STVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCV------QIA 129
Query: 442 EGLTYLHSAAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDSHIFTTAQGT 501
+G+ YL + HRD+ + N+L+ + K++DFGL++L+ E + H +
Sbjct: 130 KGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLL-GAEEKEYHA-EGGKVP 184
Query: 502 MGYLDPEYYRNFQLTDKSDVYSFGVVLLELLT 533
+ ++ E + T +SDV+S+GV + EL+T
Sbjct: 185 IKWMALESILHRIYTHQSDVWSYGVTVWELMT 216
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 82.4 bits (202), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 68/211 (32%), Positives = 98/211 (46%), Gaps = 32/211 (15%)
Query: 338 IGTGGFGEVFKGILD---DGT--VTAIKRAKL-GNTKGTDLVLNEVRILCQVNHRSLVRL 391
+G G FG+V D DGT + A+K K + E+ IL + H +++
Sbjct: 39 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTLYHEHIIKY 98
Query: 392 LGCCVELDQT--LMIYEYIPNGTLFDHLHCDFTGKWPPLPWHLRLVIAHQIAEGLTYLHS 449
GCC + ++ EY+P G+L D+L G L+ A QI EG+ YLH+
Sbjct: 99 KGCCEDAGAASLQLVMEYVPLGSLRDYLPRHSIG------LAQLLLFAQQICEGMAYLHA 152
Query: 450 AAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVER-------TETNDSHIFTTAQGTM 502
HRD+ + N+LLD K+ DFGL++ V E DS +F A
Sbjct: 153 QHY---IHRDLAARNVLLDNDRLVKIGDFGLAKAVPEGHEXYRVREDGDSPVFWYA---- 205
Query: 503 GYLDPEYYRNFQLTDKSDVYSFGVVLLELLT 533
PE + ++ SDV+SFGV L ELLT
Sbjct: 206 ----PECLKEYKFYYASDVWSFGVTLYELLT 232
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 82.4 bits (202), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 63/206 (30%), Positives = 96/206 (46%), Gaps = 15/206 (7%)
Query: 338 IGTGGFGEVFKGILDDGTVTAIKRAKLGNTKGTDLVLN---EVRILCQVNHRSLVRLLGC 394
+G G +GEV + + T A+ + + D N E+ I +NH ++V+ G
Sbjct: 15 LGEGAYGEVQLAV-NRVTEEAVAVKIVDMKRAVDCPENIKKEICINAMLNHENVVKFYGH 73
Query: 395 CVELDQTLMIYEYIPNGTLFDHLHCDFTGKWPPLPWHLRLVIAHQIAEGLTYLHSAAVPP 454
E + + EY G LFD + D P P R HQ+ G+ YLH
Sbjct: 74 RREGNIQYLFLEYCSGGELFDRIEPDIGM---PEPDAQRFF--HQLMAGVVYLHGIG--- 125
Query: 455 IYHRDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDSHIFTTAQGTMGYLDPEYYRNFQ 514
I HRD+K N+LLDE+ N K+SDFGL+ + N + GT+ Y+ PE + +
Sbjct: 126 ITHRDIKPENLLLDERDNLKISDFGLATVFRY--NNRERLLNKMCGTLPYVAPELLKRRE 183
Query: 515 L-TDKSDVYSFGVVLLELLTSKKAID 539
+ DV+S G+VL +L + D
Sbjct: 184 FHAEPVDVWSCGIVLTAMLAGELPWD 209
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 82.4 bits (202), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 62/212 (29%), Positives = 109/212 (51%), Gaps = 20/212 (9%)
Query: 330 NNFSKDNLIGTGGFGEVFKGI-LDDGTVT----AIKRAKLGNT-KGTDLVLNEVRILCQV 383
F K ++G+G FG V+KG+ + +G AIK + + K +L+E ++ V
Sbjct: 16 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 75
Query: 384 NHRSLVRLLGCCVELDQTLMIYEYIPNGTLFDHL--HCDFTGKWPPLPWHLRLVIAHQIA 441
++ + RLLG C+ +I + +P G L D++ H D G L W + QIA
Sbjct: 76 DNPHVCRLLGICLT-STVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCV------QIA 128
Query: 442 EGLTYLHSAAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDSHIFTTAQGT 501
+G+ YL + HRD+ + N+L+ + K++DFGL++L+ E + H +
Sbjct: 129 KGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLL-GAEEKEYHA-EGGKVP 183
Query: 502 MGYLDPEYYRNFQLTDKSDVYSFGVVLLELLT 533
+ ++ E + T +SDV+S+GV + EL+T
Sbjct: 184 IKWMALESILHRIYTHQSDVWSYGVTVWELMT 215
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 82.4 bits (202), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 62/206 (30%), Positives = 96/206 (46%), Gaps = 15/206 (7%)
Query: 338 IGTGGFGEVFKGILDDGTVTAIKRAKLGNTKGTDLVLNEVRILC---QVNHRSLVRLLGC 394
+G G +GEV + + T A+ + + D N + +C +NH ++V+ G
Sbjct: 13 LGEGAYGEVQLAV-NRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGH 71
Query: 395 CVELDQTLMIYEYIPNGTLFDHLHCDFTGKWPPLPWHLRLVIAHQIAEGLTYLHSAAVPP 454
E + + EY G LFD + D P P R HQ+ G+ YLH
Sbjct: 72 RREGNIQYLFLEYCSGGELFDRIEPDIGM---PEPDAQRFF--HQLMAGVVYLHGIG--- 123
Query: 455 IYHRDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDSHIFTTAQGTMGYLDPEYYRNFQ 514
I HRD+K N+LLDE+ N K+SDFGL+ + N + GT+ Y+ PE + +
Sbjct: 124 ITHRDIKPENLLLDERDNLKISDFGLATVFRY--NNRERLLNKMCGTLPYVAPELLKRRE 181
Query: 515 L-TDKSDVYSFGVVLLELLTSKKAID 539
+ DV+S G+VL +L + D
Sbjct: 182 FHAEPVDVWSCGIVLTAMLAGELPWD 207
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 82.4 bits (202), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 67/197 (34%), Positives = 98/197 (49%), Gaps = 17/197 (8%)
Query: 338 IGTGGFGEVFKGILDDGTVTAIKRAKLGNTKGTDLVLNEVRILCQVNHRSLVRLLGCCVE 397
IG G FG+V G G A+K K N L E ++ Q+ H +LV+LLG VE
Sbjct: 14 IGKGEFGDVMLGDYR-GNKVAVKCIK--NDATAQAFLAEASVMTQLRHSNLVQLLGVIVE 70
Query: 398 LDQTLMIY-EYIPNGTLFDHLHCDFTGKWPPLPWHLRLVIAHQIAEGLTYLHSAAVPPIY 456
L I EY+ G+L D+L G+ L L + + E + YL
Sbjct: 71 EKGGLYIVTEYMAKGSLVDYLRS--RGR-SVLGGDCLLKFSLDVCEAMEYLEGNN---FV 124
Query: 457 HRDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDSHIFTTAQGTMGYLDPEYYRNFQLT 516
HRD+ + N+L+ E AKVSDFGL++ E + T D T + + + PE R + +
Sbjct: 125 HRDLAARNVLVSEDNVAKVSDFGLTK--EASSTQD-----TGKLPVKWTAPEALREKKFS 177
Query: 517 DKSDVYSFGVVLLELLT 533
KSDV+SFG++L E+ +
Sbjct: 178 TKSDVWSFGILLWEIYS 194
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 82.4 bits (202), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 62/212 (29%), Positives = 109/212 (51%), Gaps = 20/212 (9%)
Query: 330 NNFSKDNLIGTGGFGEVFKGI-LDDGTVT----AIKRAKLGNT-KGTDLVLNEVRILCQV 383
F K ++G+G FG V+KG+ + +G AIK + + K +L+E ++ V
Sbjct: 15 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 74
Query: 384 NHRSLVRLLGCCVELDQTLMIYEYIPNGTLFDHL--HCDFTGKWPPLPWHLRLVIAHQIA 441
++ + RLLG C+ +I + +P G L D++ H D G L W + QIA
Sbjct: 75 DNPHVCRLLGICLT-STVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCV------QIA 127
Query: 442 EGLTYLHSAAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDSHIFTTAQGT 501
+G+ YL + HRD+ + N+L+ + K++DFGL++L+ E + H +
Sbjct: 128 KGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLL-GAEEKEYHA-EGGKVP 182
Query: 502 MGYLDPEYYRNFQLTDKSDVYSFGVVLLELLT 533
+ ++ E + T +SDV+S+GV + EL+T
Sbjct: 183 IKWMALESILHRIYTHQSDVWSYGVTVWELMT 214
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 82.4 bits (202), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 65/206 (31%), Positives = 106/206 (51%), Gaps = 15/206 (7%)
Query: 335 DNLIGTGGFGEVFKGILDDGTVTAIKRAKLGNTKGTDL-----VLNEVRILCQVNHRSLV 389
+ +IG G FG V+ G L D I A + TD+ L E I+ +H +++
Sbjct: 36 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 95
Query: 390 RLLGCCVELDQT-LMIYEYIPNGTLFDHLHCDFTGKWPPLPWHLRLV-IAHQIAEGLTYL 447
LLG C+ + + L++ Y+ +G L + + + P L+ Q+A+G+ +L
Sbjct: 96 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHN-----PTVKDLIGFGLQVAKGMKFL 150
Query: 448 HSAAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDSHIFTTAQGTMGYLDP 507
S HRD+ + N +LDEK KV+DFGL+R + E + H T A+ + ++
Sbjct: 151 ASKK---FVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMAL 207
Query: 508 EYYRNFQLTDKSDVYSFGVVLLELLT 533
E + + T KSDV+SFGV+L EL+T
Sbjct: 208 ESLQTQKFTTKSDVWSFGVLLWELMT 233
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 82.4 bits (202), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 111/215 (51%), Gaps = 26/215 (12%)
Query: 330 NNFSKDNLIGTGGFGEVFKGI-LDDGTVT----AIKRAKLGNT-KGTDLVLNEVRILCQV 383
F K ++G+G FG V+KG+ + +G AIK + + K +L+E ++ V
Sbjct: 15 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 74
Query: 384 NHRSLVRLLGCCVELDQTLMIYEYIPNGTLFDHL--HCDFTGKWPPLPWHLRLVIAHQIA 441
++ + RLLG C+ +I + +P G L D++ H D G L W + QIA
Sbjct: 75 DNPHVCRLLGICLT-STVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCV------QIA 127
Query: 442 EGLTYLHSAAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDSHIFTTAQG- 500
+G+ YL + HRD+ + N+L+ + K++DFGL++L+ E + H A+G
Sbjct: 128 KGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLG-AEEKEYH----AEGG 179
Query: 501 --TMGYLDPEYYRNFQLTDKSDVYSFGVVLLELLT 533
+ ++ E + T +SDV+S+GV + EL+T
Sbjct: 180 KVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 214
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 82.4 bits (202), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 64/203 (31%), Positives = 100/203 (49%), Gaps = 17/203 (8%)
Query: 332 FSKDNLIGTGGFGEVFKGILDDGT--VTAIKRAKLGNTKGTDLVLN-EVRILCQVNHRSL 388
F+K IG G FGEVFKGI D+ T V AIK L + + E+ +L Q + +
Sbjct: 29 FTKLEKIGKGSFGEVFKGI-DNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYV 87
Query: 389 VRLLGCCVELDQTLMIYEYIPNGTLFDHLHCDFTGKWPPLPWHLRLVIAHQIAEGLTYLH 448
+ G ++ + +I EY+ G+ D L PL I +I +GL YLH
Sbjct: 88 TKYYGSYLKDTKLWIIMEYLGGGSALDLLEPG------PLDETQIATILREILKGLDYLH 141
Query: 449 SAAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDSHIFTTAQGTMGYLDPE 508
S HRD+K++N+LL E K++DFG++ + T+ + T GT ++ PE
Sbjct: 142 SEKK---IHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRN----TFVGTPFWMAPE 194
Query: 509 YYRNFQLTDKSDVYSFGVVLLEL 531
+ K+D++S G+ +EL
Sbjct: 195 VIKQSAYDSKADIWSLGITAIEL 217
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 82.4 bits (202), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 67/197 (34%), Positives = 98/197 (49%), Gaps = 17/197 (8%)
Query: 338 IGTGGFGEVFKGILDDGTVTAIKRAKLGNTKGTDLVLNEVRILCQVNHRSLVRLLGCCVE 397
IG G FG+V G G A+K K N L E ++ Q+ H +LV+LLG VE
Sbjct: 201 IGKGEFGDVMLGDYR-GNKVAVKCIK--NDATAQAFLAEASVMTQLRHSNLVQLLGVIVE 257
Query: 398 LDQTLMIY-EYIPNGTLFDHLHCDFTGKWPPLPWHLRLVIAHQIAEGLTYLHSAAVPPIY 456
L I EY+ G+L D+L G+ L L + + E + YL
Sbjct: 258 EKGGLYIVTEYMAKGSLVDYLRS--RGR-SVLGGDCLLKFSLDVCEAMEYLEGNN---FV 311
Query: 457 HRDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDSHIFTTAQGTMGYLDPEYYRNFQLT 516
HRD+ + N+L+ E AKVSDFGL++ E + T D T + + + PE R + +
Sbjct: 312 HRDLAARNVLVSEDNVAKVSDFGLTK--EASSTQD-----TGKLPVKWTAPEALREKKFS 364
Query: 517 DKSDVYSFGVVLLELLT 533
KSDV+SFG++L E+ +
Sbjct: 365 TKSDVWSFGILLWEIYS 381
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 82.4 bits (202), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 62/206 (30%), Positives = 96/206 (46%), Gaps = 15/206 (7%)
Query: 338 IGTGGFGEVFKGILDDGTVTAIKRAKLGNTKGTDLVLNEVRILC---QVNHRSLVRLLGC 394
+G G +GEV + + T A+ + + D N + +C +NH ++V+ G
Sbjct: 14 LGEGAYGEVQLAV-NRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGH 72
Query: 395 CVELDQTLMIYEYIPNGTLFDHLHCDFTGKWPPLPWHLRLVIAHQIAEGLTYLHSAAVPP 454
E + + EY G LFD + D P P R HQ+ G+ YLH
Sbjct: 73 RREGNIQYLFLEYCSGGELFDRIEPDIGM---PEPDAQRFF--HQLMAGVVYLHGIG--- 124
Query: 455 IYHRDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDSHIFTTAQGTMGYLDPEYYRNFQ 514
I HRD+K N+LLDE+ N K+SDFGL+ + N + GT+ Y+ PE + +
Sbjct: 125 ITHRDIKPENLLLDERDNLKISDFGLATVFRY--NNRERLLNKMCGTLPYVAPELLKRRE 182
Query: 515 L-TDKSDVYSFGVVLLELLTSKKAID 539
+ DV+S G+VL +L + D
Sbjct: 183 FHAEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 82.4 bits (202), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 62/206 (30%), Positives = 96/206 (46%), Gaps = 15/206 (7%)
Query: 338 IGTGGFGEVFKGILDDGTVTAIKRAKLGNTKGTDLVLNEVRILC---QVNHRSLVRLLGC 394
+G G +GEV + + T A+ + + D N + +C +NH ++V+ G
Sbjct: 14 LGEGAYGEVQLAV-NRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGH 72
Query: 395 CVELDQTLMIYEYIPNGTLFDHLHCDFTGKWPPLPWHLRLVIAHQIAEGLTYLHSAAVPP 454
E + + EY G LFD + D P P R HQ+ G+ YLH
Sbjct: 73 RREGNIQYLFLEYCSGGELFDRIEPDIGM---PEPDAQRFF--HQLMAGVVYLHGIG--- 124
Query: 455 IYHRDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDSHIFTTAQGTMGYLDPEYYRNFQ 514
I HRD+K N+LLDE+ N K+SDFGL+ + N + GT+ Y+ PE + +
Sbjct: 125 ITHRDIKPENLLLDERDNLKISDFGLATVFRY--NNRERLLNKMCGTLPYVAPELLKRRE 182
Query: 515 L-TDKSDVYSFGVVLLELLTSKKAID 539
+ DV+S G+VL +L + D
Sbjct: 183 FHAEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 82.0 bits (201), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 62/206 (30%), Positives = 96/206 (46%), Gaps = 15/206 (7%)
Query: 338 IGTGGFGEVFKGILDDGTVTAIKRAKLGNTKGTDLVLNEVRILC---QVNHRSLVRLLGC 394
+G G +GEV + + T A+ + + D N + +C +NH ++V+ G
Sbjct: 14 LGEGAYGEVQLAV-NRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGH 72
Query: 395 CVELDQTLMIYEYIPNGTLFDHLHCDFTGKWPPLPWHLRLVIAHQIAEGLTYLHSAAVPP 454
E + + EY G LFD + D P P R HQ+ G+ YLH
Sbjct: 73 RREGNIQYLFLEYCSGGELFDRIEPDIGM---PEPDAQRFF--HQLMAGVVYLHGIG--- 124
Query: 455 IYHRDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDSHIFTTAQGTMGYLDPEYYRNFQ 514
I HRD+K N+LLDE+ N K+SDFGL+ + N + GT+ Y+ PE + +
Sbjct: 125 ITHRDIKPENLLLDERDNLKISDFGLATVFRY--NNRERLLNKMCGTLPYVAPELLKRRE 182
Query: 515 L-TDKSDVYSFGVVLLELLTSKKAID 539
+ DV+S G+VL +L + D
Sbjct: 183 FHAEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 82.0 bits (201), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 62/206 (30%), Positives = 96/206 (46%), Gaps = 15/206 (7%)
Query: 338 IGTGGFGEVFKGILDDGTVTAIKRAKLGNTKGTDLVLNEVRILC---QVNHRSLVRLLGC 394
+G G +GEV + + T A+ + + D N + +C +NH ++V+ G
Sbjct: 15 LGEGAYGEVQLAV-NRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGH 73
Query: 395 CVELDQTLMIYEYIPNGTLFDHLHCDFTGKWPPLPWHLRLVIAHQIAEGLTYLHSAAVPP 454
E + + EY G LFD + D P P R HQ+ G+ YLH
Sbjct: 74 RREGNIQYLFLEYCSGGELFDRIEPDIGM---PEPDAQRFF--HQLMAGVVYLHGIG--- 125
Query: 455 IYHRDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDSHIFTTAQGTMGYLDPEYYRNFQ 514
I HRD+K N+LLDE+ N K+SDFGL+ + N + GT+ Y+ PE + +
Sbjct: 126 ITHRDIKPENLLLDERDNLKISDFGLATVFRY--NNRERLLNKMCGTLPYVAPELLKRRE 183
Query: 515 L-TDKSDVYSFGVVLLELLTSKKAID 539
+ DV+S G+VL +L + D
Sbjct: 184 FHAEPVDVWSCGIVLTAMLAGELPWD 209
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 82.0 bits (201), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 67/197 (34%), Positives = 97/197 (49%), Gaps = 17/197 (8%)
Query: 338 IGTGGFGEVFKGILDDGTVTAIKRAKLGNTKGTDLVLNEVRILCQVNHRSLVRLLGCCVE 397
IG G FG+V G G A+K K N L E ++ Q+ H +LV+LLG VE
Sbjct: 20 IGKGEFGDVMLGDYR-GNKVAVKCIK--NDATAQAFLAEASVMTQLRHSNLVQLLGVIVE 76
Query: 398 LDQTLMIY-EYIPNGTLFDHLHCDFTGKWPPLPWHLRLVIAHQIAEGLTYLHSAAVPPIY 456
L I EY+ G+L D+L G+ L L + + E + YL
Sbjct: 77 EKGGLYIVTEYMAKGSLVDYLRS--RGR-SVLGGDCLLKFSLDVCEAMEYLEGNN---FV 130
Query: 457 HRDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDSHIFTTAQGTMGYLDPEYYRNFQLT 516
HRD+ + N+L+ E AKVSDFGL++ E + T D T + + + PE R +
Sbjct: 131 HRDLAARNVLVSEDNVAKVSDFGLTK--EASSTQD-----TGKLPVKWTAPEALREAAFS 183
Query: 517 DKSDVYSFGVVLLELLT 533
KSDV+SFG++L E+ +
Sbjct: 184 TKSDVWSFGILLWEIYS 200
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 82.0 bits (201), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 111/215 (51%), Gaps = 26/215 (12%)
Query: 330 NNFSKDNLIGTGGFGEVFKGI-LDDGTVT----AIKRAKLGNT-KGTDLVLNEVRILCQV 383
F K ++G+G FG V+KG+ + +G AIK + + K +L+E ++ V
Sbjct: 18 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 77
Query: 384 NHRSLVRLLGCCVELDQTLMIYEYIPNGTLFDHL--HCDFTGKWPPLPWHLRLVIAHQIA 441
++ + RLLG C+ +I + +P G L D++ H D G L W + QIA
Sbjct: 78 DNPHVCRLLGICLT-STVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCV------QIA 130
Query: 442 EGLTYLHSAAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDSHIFTTAQG- 500
+G+ YL + HRD+ + N+L+ + K++DFGL++L+ E + H A+G
Sbjct: 131 KGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLG-AEEKEYH----AEGG 182
Query: 501 --TMGYLDPEYYRNFQLTDKSDVYSFGVVLLELLT 533
+ ++ E + T +SDV+S+GV + EL+T
Sbjct: 183 KVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 217
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 82.0 bits (201), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 111/215 (51%), Gaps = 26/215 (12%)
Query: 330 NNFSKDNLIGTGGFGEVFKGI-LDDGTVT----AIKRAKLGNT-KGTDLVLNEVRILCQV 383
F K ++G+G FG V+KG+ + +G AIK + + K +L+E ++ V
Sbjct: 17 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 76
Query: 384 NHRSLVRLLGCCVELDQTLMIYEYIPNGTLFDHL--HCDFTGKWPPLPWHLRLVIAHQIA 441
++ + RLLG C+ +I + +P G L D++ H D G L W + QIA
Sbjct: 77 DNPHVCRLLGICLT-STVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCV------QIA 129
Query: 442 EGLTYLHSAAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDSHIFTTAQG- 500
+G+ YL + HRD+ + N+L+ + K++DFGL++L+ E + H A+G
Sbjct: 130 KGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLL-GAEEKEYH----AEGG 181
Query: 501 --TMGYLDPEYYRNFQLTDKSDVYSFGVVLLELLT 533
+ ++ E + T +SDV+S+GV + EL+T
Sbjct: 182 KVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 216
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 82.0 bits (201), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 68/224 (30%), Positives = 103/224 (45%), Gaps = 32/224 (14%)
Query: 326 RRATNNFSKDNLIGTGGFGEVFKGILD-DGTVTAIKRAKLGNTKGTDLVLNEVRILCQVN 384
+R +F + LIG+GGFG+VFK DG IKR K N K EV+ L +++
Sbjct: 7 KRFGMDFKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNNEKAE----REVKALAKLD 62
Query: 385 HRSLVRLLGCCVELD---------------QTLMI-YEYIPNGTLFDHLHCDFTGKWPPL 428
H ++V GC D + L I E+ GTL + + L
Sbjct: 63 HVNIVHYNGCWDGFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIE---KRRGEKL 119
Query: 429 PWHLRLVIAHQIAEGLTYLHSAAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVERTE 488
L L + QI +G+ Y+HS + +RD+K SNI L + K+ DFGL T
Sbjct: 120 DKVLALELFEQITKGVDYIHS---KKLINRDLKPSNIFLVDTKQVKIGDFGLV-----TS 171
Query: 489 TNDSHIFTTAQGTMGYLDPEYYRNFQLTDKSDVYSFGVVLLELL 532
+ ++GT+ Y+ PE + + D+Y+ G++L ELL
Sbjct: 172 LKNDGKRXRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELL 215
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 82.0 bits (201), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 62/206 (30%), Positives = 96/206 (46%), Gaps = 15/206 (7%)
Query: 338 IGTGGFGEVFKGILDDGTVTAIKRAKLGNTKGTDLVLNEVRILC---QVNHRSLVRLLGC 394
+G G +GEV + + T A+ + + D N + +C +NH ++V+ G
Sbjct: 14 LGEGAYGEVQLAV-NRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGH 72
Query: 395 CVELDQTLMIYEYIPNGTLFDHLHCDFTGKWPPLPWHLRLVIAHQIAEGLTYLHSAAVPP 454
E + + EY G LFD + D P P R HQ+ G+ YLH
Sbjct: 73 RREGNIQYLFLEYCSGGELFDRIEPDIGM---PEPDAQRFF--HQLMAGVVYLHGIG--- 124
Query: 455 IYHRDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDSHIFTTAQGTMGYLDPEYYRNFQ 514
I HRD+K N+LLDE+ N K+SDFGL+ + N + GT+ Y+ PE + +
Sbjct: 125 ITHRDIKPENLLLDERDNLKISDFGLATVFRY--NNRERLLNKMCGTLPYVAPELLKRRE 182
Query: 515 L-TDKSDVYSFGVVLLELLTSKKAID 539
+ DV+S G+VL +L + D
Sbjct: 183 FHAEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 82.0 bits (201), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 65/206 (31%), Positives = 106/206 (51%), Gaps = 15/206 (7%)
Query: 335 DNLIGTGGFGEVFKGILDDGTVTAIKRAKLGNTKGTDL-----VLNEVRILCQVNHRSLV 389
+ +IG G FG V+ G L D I A + TD+ L E I+ +H +++
Sbjct: 36 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 95
Query: 390 RLLGCCVELDQT-LMIYEYIPNGTLFDHLHCDFTGKWPPLPWHLRLV-IAHQIAEGLTYL 447
LLG C+ + + L++ Y+ +G L + + + P L+ Q+A+G+ +L
Sbjct: 96 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHN-----PTVKDLIGFGLQVAKGMKFL 150
Query: 448 HSAAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDSHIFTTAQGTMGYLDP 507
S HRD+ + N +LDEK KV+DFGL+R + E + H T A+ + ++
Sbjct: 151 ASKK---FVHRDLAARNCMLDEKFTVKVADFGLARDMLDKEFDSVHNKTGAKLPVKWMAL 207
Query: 508 EYYRNFQLTDKSDVYSFGVVLLELLT 533
E + + T KSDV+SFGV+L EL+T
Sbjct: 208 ESLQTQKFTTKSDVWSFGVLLWELMT 233
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 82.0 bits (201), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 62/206 (30%), Positives = 96/206 (46%), Gaps = 15/206 (7%)
Query: 338 IGTGGFGEVFKGILDDGTVTAIKRAKLGNTKGTDLVLNEVRILC---QVNHRSLVRLLGC 394
+G G +GEV + + T A+ + + D N + +C +NH ++V+ G
Sbjct: 14 LGEGAYGEVQLAV-NRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGH 72
Query: 395 CVELDQTLMIYEYIPNGTLFDHLHCDFTGKWPPLPWHLRLVIAHQIAEGLTYLHSAAVPP 454
E + + EY G LFD + D P P R HQ+ G+ YLH
Sbjct: 73 RREGNIQYLFLEYCSGGELFDRIEPDIGM---PEPDAQRFF--HQLMAGVVYLHGIG--- 124
Query: 455 IYHRDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDSHIFTTAQGTMGYLDPEYYRNFQ 514
I HRD+K N+LLDE+ N K+SDFGL+ + N + GT+ Y+ PE + +
Sbjct: 125 ITHRDIKPENLLLDERDNLKISDFGLATVFRY--NNRERLLNKMCGTLPYVAPELLKRRE 182
Query: 515 L-TDKSDVYSFGVVLLELLTSKKAID 539
+ DV+S G+VL +L + D
Sbjct: 183 FHAEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 82.0 bits (201), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 111/215 (51%), Gaps = 26/215 (12%)
Query: 330 NNFSKDNLIGTGGFGEVFKGI-LDDGTVT----AIKRAKLGNT-KGTDLVLNEVRILCQV 383
F K ++G+G FG V+KG+ + +G AIK + + K +L+E ++ V
Sbjct: 22 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 81
Query: 384 NHRSLVRLLGCCVELDQTLMIYEYIPNGTLFDHL--HCDFTGKWPPLPWHLRLVIAHQIA 441
++ + RLLG C+ +I + +P G L D++ H D G L W + QIA
Sbjct: 82 DNPHVCRLLGICLT-STVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCV------QIA 134
Query: 442 EGLTYLHSAAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDSHIFTTAQG- 500
+G+ YL + HRD+ + N+L+ + K++DFGL++L+ E + H A+G
Sbjct: 135 KGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLG-AEEKEYH----AEGG 186
Query: 501 --TMGYLDPEYYRNFQLTDKSDVYSFGVVLLELLT 533
+ ++ E + T +SDV+S+GV + EL+T
Sbjct: 187 KVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 221
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 82.0 bits (201), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 111/215 (51%), Gaps = 26/215 (12%)
Query: 330 NNFSKDNLIGTGGFGEVFKGI-LDDGTVT----AIKRAKLGNT-KGTDLVLNEVRILCQV 383
F K ++G+G FG V+KG+ + +G AIK + + K +L+E ++ V
Sbjct: 18 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 77
Query: 384 NHRSLVRLLGCCVELDQTLMIYEYIPNGTLFDHL--HCDFTGKWPPLPWHLRLVIAHQIA 441
++ + RLLG C+ +I + +P G L D++ H D G L W + QIA
Sbjct: 78 DNPHVCRLLGICLT-STVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCV------QIA 130
Query: 442 EGLTYLHSAAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDSHIFTTAQG- 500
+G+ YL + HRD+ + N+L+ + K++DFGL++L+ E + H A+G
Sbjct: 131 KGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLL-GAEEKEYH----AEGG 182
Query: 501 --TMGYLDPEYYRNFQLTDKSDVYSFGVVLLELLT 533
+ ++ E + T +SDV+S+GV + EL+T
Sbjct: 183 KVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 217
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 82.0 bits (201), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 111/215 (51%), Gaps = 26/215 (12%)
Query: 330 NNFSKDNLIGTGGFGEVFKGI-LDDGTVT----AIKRAKLGNT-KGTDLVLNEVRILCQV 383
F K ++G+G FG V+KG+ + +G AIK + + K +L+E ++ V
Sbjct: 18 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 77
Query: 384 NHRSLVRLLGCCVELDQTLMIYEYIPNGTLFDHL--HCDFTGKWPPLPWHLRLVIAHQIA 441
++ + RLLG C+ +I + +P G L D++ H D G L W + QIA
Sbjct: 78 DNPHVCRLLGICLT-STVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCV------QIA 130
Query: 442 EGLTYLHSAAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDSHIFTTAQG- 500
+G+ YL + HRD+ + N+L+ + K++DFGL++L+ E + H A+G
Sbjct: 131 KGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLL-GAEEKEYH----AEGG 182
Query: 501 --TMGYLDPEYYRNFQLTDKSDVYSFGVVLLELLT 533
+ ++ E + T +SDV+S+GV + EL+T
Sbjct: 183 KVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 217
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 82.0 bits (201), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 111/215 (51%), Gaps = 26/215 (12%)
Query: 330 NNFSKDNLIGTGGFGEVFKGI-LDDGTVT----AIKRAKLGNT-KGTDLVLNEVRILCQV 383
F K ++G+G FG V+KG+ + +G AIK + + K +L+E ++ V
Sbjct: 15 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 74
Query: 384 NHRSLVRLLGCCVELDQTLMIYEYIPNGTLFDHL--HCDFTGKWPPLPWHLRLVIAHQIA 441
++ + RLLG C+ +I + +P G L D++ H D G L W + QIA
Sbjct: 75 DNPHVCRLLGICLT-STVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCV------QIA 127
Query: 442 EGLTYLHSAAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDSHIFTTAQG- 500
+G+ YL + HRD+ + N+L+ + K++DFGL++L+ E + H A+G
Sbjct: 128 KGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLL-GAEEKEYH----AEGG 179
Query: 501 --TMGYLDPEYYRNFQLTDKSDVYSFGVVLLELLT 533
+ ++ E + T +SDV+S+GV + EL+T
Sbjct: 180 KVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 214
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 82.0 bits (201), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 111/215 (51%), Gaps = 26/215 (12%)
Query: 330 NNFSKDNLIGTGGFGEVFKGI-LDDGTVT----AIKRAKLGNT-KGTDLVLNEVRILCQV 383
F K ++G+G FG V+KG+ + +G AIK + + K +L+E ++ V
Sbjct: 21 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 80
Query: 384 NHRSLVRLLGCCVELDQTLMIYEYIPNGTLFDHL--HCDFTGKWPPLPWHLRLVIAHQIA 441
++ + RLLG C+ +I + +P G L D++ H D G L W + QIA
Sbjct: 81 DNPHVCRLLGICLT-STVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCV------QIA 133
Query: 442 EGLTYLHSAAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDSHIFTTAQG- 500
+G+ YL + HRD+ + N+L+ + K++DFGL++L+ E + H A+G
Sbjct: 134 KGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLL-GAEEKEYH----AEGG 185
Query: 501 --TMGYLDPEYYRNFQLTDKSDVYSFGVVLLELLT 533
+ ++ E + T +SDV+S+GV + EL+T
Sbjct: 186 KVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 220
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 82.0 bits (201), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 111/215 (51%), Gaps = 26/215 (12%)
Query: 330 NNFSKDNLIGTGGFGEVFKGI-LDDGTVT----AIKRAKLGNT-KGTDLVLNEVRILCQV 383
F K ++G+G FG V+KG+ + +G AIK + + K +L+E ++ V
Sbjct: 9 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 68
Query: 384 NHRSLVRLLGCCVELDQTLMIYEYIPNGTLFDHL--HCDFTGKWPPLPWHLRLVIAHQIA 441
++ + RLLG C+ +I + +P G L D++ H D G L W + QIA
Sbjct: 69 DNPHVCRLLGICLT-STVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCV------QIA 121
Query: 442 EGLTYLHSAAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDSHIFTTAQG- 500
+G+ YL + HRD+ + N+L+ + K++DFGL++L+ E + H A+G
Sbjct: 122 KGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLG-AEEKEYH----AEGG 173
Query: 501 --TMGYLDPEYYRNFQLTDKSDVYSFGVVLLELLT 533
+ ++ E + T +SDV+S+GV + EL+T
Sbjct: 174 KVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 208
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 82.0 bits (201), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 59/199 (29%), Positives = 98/199 (49%), Gaps = 11/199 (5%)
Query: 338 IGTGGFGEVFKGILDDGTVTAIKRAKLGNTKGTDLVLNEVRILCQVNHRSLVRLLGCCVE 397
+GTG FG V G AIK K G+ D + E +++ ++H LV+L G C +
Sbjct: 16 LGTGQFGVVKYGKWRGQYDVAIKMIKEGSM-SEDEFIEEAKVMMNLSHEKLVQLYGVCTK 74
Query: 398 LDQTLMIYEYIPNGTLFDHLHCDFTGKWPPLPWHLRLVIAHQIAEGLTYLHSAAVPPIYH 457
+I EY+ NG L ++L + ++ L + + E + YL S H
Sbjct: 75 QRPIFIITEYMANGCLLNYLR-EMRHRFQT---QQLLEMCKDVCEAMEYLES---KQFLH 127
Query: 458 RDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDSHIFTTAQGTMGYLDPEYYRNFQLTD 517
RD+ + N L++++ KVSDFGLSR V E S ++ + + PE + +
Sbjct: 128 RDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSS---VGSKFPVRWSPPEVLMYSKFSS 184
Query: 518 KSDVYSFGVVLLELLTSKK 536
KSD+++FGV++ E+ + K
Sbjct: 185 KSDIWAFGVLMWEIYSLGK 203
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 82.0 bits (201), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 63/203 (31%), Positives = 99/203 (48%), Gaps = 17/203 (8%)
Query: 332 FSKDNLIGTGGFGEVFKGILDDGT--VTAIKRAKLGNTKGTDLVLN-EVRILCQVNHRSL 388
F+K IG G FGEVFKGI D+ T V AIK L + + E+ +L Q + +
Sbjct: 24 FTKLEKIGKGSFGEVFKGI-DNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYV 82
Query: 389 VRLLGCCVELDQTLMIYEYIPNGTLFDHLHCDFTGKWPPLPWHLRLVIAHQIAEGLTYLH 448
+ G ++ + +I EY+ G+ D L PL I +I +GL YLH
Sbjct: 83 TKYYGSYLKDTKLWIIMEYLGGGSALDLLEPG------PLDETQIATILREILKGLDYLH 136
Query: 449 SAAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDSHIFTTAQGTMGYLDPE 508
S HRD+K++N+LL E K++DFG++ + T+ + GT ++ PE
Sbjct: 137 SEKK---IHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNXFV----GTPFWMAPE 189
Query: 509 YYRNFQLTDKSDVYSFGVVLLEL 531
+ K+D++S G+ +EL
Sbjct: 190 VIKQSAYDSKADIWSLGITAIEL 212
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 63/223 (28%), Positives = 110/223 (49%), Gaps = 23/223 (10%)
Query: 323 KEIRRATNNFSKDNLI------GTGGFGEVFKGIL---DDGTVTAIKRAKLGNTKG-TDL 372
+E++ +DNL+ G G FG V +G+ AIK K G K T+
Sbjct: 323 EELKDKKLFLKRDNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEE 382
Query: 373 VLNEVRILCQVNHRSLVRLLGCCVELDQTLMIYEYIPNGTLFDHLHCDFTGKWPPLPWHL 432
++ E +I+ Q+++ +VRL+G C + + +++ E G L H GK +P
Sbjct: 383 MMREAQIMHQLDNPYIVRLIGVC-QAEALMLVMEMAGGGPL----HKFLVGKREEIPVSN 437
Query: 433 RLVIAHQIAEGLTYLHSAAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDS 492
+ HQ++ G+ YL HR++ + N+LL + AK+SDFGLS+ + +DS
Sbjct: 438 VAELLHQVSMGMKYLEEKN---FVHRNLAARNVLLVNRHYAKISDFGLSKAL---GADDS 491
Query: 493 HIFTTAQGT--MGYLDPEYYRNFQLTDKSDVYSFGVVLLELLT 533
+ + G + + PE + + +SDV+S+GV + E L+
Sbjct: 492 YYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALS 534
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 59/199 (29%), Positives = 98/199 (49%), Gaps = 11/199 (5%)
Query: 338 IGTGGFGEVFKGILDDGTVTAIKRAKLGNTKGTDLVLNEVRILCQVNHRSLVRLLGCCVE 397
+GTG FG V G AIK K G+ D + E +++ ++H LV+L G C +
Sbjct: 17 LGTGQFGVVKYGKWRGQYDVAIKMIKEGSM-SEDEFIEEAKVMMNLSHEKLVQLYGVCTK 75
Query: 398 LDQTLMIYEYIPNGTLFDHLHCDFTGKWPPLPWHLRLVIAHQIAEGLTYLHSAAVPPIYH 457
+I EY+ NG L ++L + ++ L + + E + YL S H
Sbjct: 76 QRPIFIITEYMANGCLLNYLR-EMRHRFQT---QQLLEMCKDVCEAMEYLES---KQFLH 128
Query: 458 RDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDSHIFTTAQGTMGYLDPEYYRNFQLTD 517
RD+ + N L++++ KVSDFGLSR V E S ++ + + PE + +
Sbjct: 129 RDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSS---VGSKFPVRWSPPEVLMYSKFSS 185
Query: 518 KSDVYSFGVVLLELLTSKK 536
KSD+++FGV++ E+ + K
Sbjct: 186 KSDIWAFGVLMWEIYSLGK 204
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 59/199 (29%), Positives = 98/199 (49%), Gaps = 11/199 (5%)
Query: 338 IGTGGFGEVFKGILDDGTVTAIKRAKLGNTKGTDLVLNEVRILCQVNHRSLVRLLGCCVE 397
+GTG FG V G AIK K G+ D + E +++ ++H LV+L G C +
Sbjct: 12 LGTGQFGVVKYGKWRGQYDVAIKMIKEGSM-SEDEFIEEAKVMMNLSHEKLVQLYGVCTK 70
Query: 398 LDQTLMIYEYIPNGTLFDHLHCDFTGKWPPLPWHLRLVIAHQIAEGLTYLHSAAVPPIYH 457
+I EY+ NG L ++L + ++ L + + E + YL S H
Sbjct: 71 QRPIFIITEYMANGCLLNYLR-EMRHRFQT---QQLLEMCKDVCEAMEYLESKQ---FLH 123
Query: 458 RDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDSHIFTTAQGTMGYLDPEYYRNFQLTD 517
RD+ + N L++++ KVSDFGLSR V E S ++ + + PE + +
Sbjct: 124 RDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSS---VGSKFPVRWSPPEVLMYSKFSS 180
Query: 518 KSDVYSFGVVLLELLTSKK 536
KSD+++FGV++ E+ + K
Sbjct: 181 KSDIWAFGVLMWEIYSLGK 199
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 63/203 (31%), Positives = 99/203 (48%), Gaps = 17/203 (8%)
Query: 332 FSKDNLIGTGGFGEVFKGILDDGT--VTAIKRAKLGNTKGTDLVLN-EVRILCQVNHRSL 388
F+K IG G FGEVFKGI D+ T V AIK L + + E+ +L Q + +
Sbjct: 9 FTKLEKIGKGSFGEVFKGI-DNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYV 67
Query: 389 VRLLGCCVELDQTLMIYEYIPNGTLFDHLHCDFTGKWPPLPWHLRLVIAHQIAEGLTYLH 448
+ G ++ + +I EY+ G+ D L PL I +I +GL YLH
Sbjct: 68 TKYYGSYLKDTKLWIIMEYLGGGSALDLLEPG------PLDETQIATILREILKGLDYLH 121
Query: 449 SAAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDSHIFTTAQGTMGYLDPE 508
S HRD+K++N+LL E K++DFG++ + T+ + GT ++ PE
Sbjct: 122 SEKK---IHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNXFV----GTPFWMAPE 174
Query: 509 YYRNFQLTDKSDVYSFGVVLLEL 531
+ K+D++S G+ +EL
Sbjct: 175 VIKQSAYDSKADIWSLGITAIEL 197
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 59/199 (29%), Positives = 98/199 (49%), Gaps = 11/199 (5%)
Query: 338 IGTGGFGEVFKGILDDGTVTAIKRAKLGNTKGTDLVLNEVRILCQVNHRSLVRLLGCCVE 397
+GTG FG V G AIK K G+ D + E +++ ++H LV+L G C +
Sbjct: 23 LGTGQFGVVKYGKWRGQYDVAIKMIKEGSM-SEDEFIEEAKVMMNLSHEKLVQLYGVCTK 81
Query: 398 LDQTLMIYEYIPNGTLFDHLHCDFTGKWPPLPWHLRLVIAHQIAEGLTYLHSAAVPPIYH 457
+I EY+ NG L ++L + ++ L + + E + YL S H
Sbjct: 82 QRPIFIITEYMANGCLLNYLR-EMRHRFQT---QQLLEMCKDVCEAMEYLES---KQFLH 134
Query: 458 RDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDSHIFTTAQGTMGYLDPEYYRNFQLTD 517
RD+ + N L++++ KVSDFGLSR V E S ++ + + PE + +
Sbjct: 135 RDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSS---VGSKFPVRWSPPEVLMYSKFSS 191
Query: 518 KSDVYSFGVVLLELLTSKK 536
KSD+++FGV++ E+ + K
Sbjct: 192 KSDIWAFGVLMWEIYSLGK 210
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 111/215 (51%), Gaps = 26/215 (12%)
Query: 330 NNFSKDNLIGTGGFGEVFKGI-LDDGTVT----AIKRAKLGNT-KGTDLVLNEVRILCQV 383
F K ++G+G FG V+KG+ + +G AIK + + K +L+E ++ V
Sbjct: 40 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 99
Query: 384 NHRSLVRLLGCCVELDQTLMIYEYIPNGTLFDHL--HCDFTGKWPPLPWHLRLVIAHQIA 441
++ + RLLG C+ +I + +P G L D++ H D G L W + QIA
Sbjct: 100 DNPHVCRLLGICLT-STVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCV------QIA 152
Query: 442 EGLTYLHSAAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDSHIFTTAQG- 500
+G+ YL + HRD+ + N+L+ + K++DFGL++L+ E + H A+G
Sbjct: 153 KGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLL-GAEEKEYH----AEGG 204
Query: 501 --TMGYLDPEYYRNFQLTDKSDVYSFGVVLLELLT 533
+ ++ E + T +SDV+S+GV + EL+T
Sbjct: 205 KVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 239
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 69/212 (32%), Positives = 101/212 (47%), Gaps = 34/212 (16%)
Query: 338 IGTGGFGEVFKGILD---DGT--VTAIK--RAKLGNTKGTDLVLNEVRILCQVNHRSLVR 390
+G G FG+V D DGT + A+K +A G + E+ IL + H +++
Sbjct: 22 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADCGPQHRSGWK-QEIDILRTLYHEHIIK 80
Query: 391 LLGCCVELDQT--LMIYEYIPNGTLFDHLHCDFTGKWPPLPWHLRLVIAHQIAEGLTYLH 448
GCC + + ++ EY+P G+L D+L G L+ A QI EG+ YLH
Sbjct: 81 YKGCCEDQGEKSLQLVMEYVPLGSLRDYLPRHSIG------LAQLLLFAQQICEGMAYLH 134
Query: 449 SAAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVER-------TETNDSHIFTTAQGT 501
S HR++ + N+LLD K+ DFGL++ V E DS +F A
Sbjct: 135 SQHY---IHRNLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYA--- 188
Query: 502 MGYLDPEYYRNFQLTDKSDVYSFGVVLLELLT 533
PE + ++ SDV+SFGV L ELLT
Sbjct: 189 -----PECLKEYKFYYASDVWSFGVTLYELLT 215
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 75/257 (29%), Positives = 110/257 (42%), Gaps = 34/257 (13%)
Query: 338 IGTGGFGEVFKGI------LDDGTVTAIKRAKLGNTKGTDLVLNEVRILCQVNHRSLVRL 391
+G G FG+VF D + A+K K E +L + H +V+
Sbjct: 23 LGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQHEHIVKF 82
Query: 392 LGCCVELDQTLMIYEYIPNGTLFDHLHCD------FTGKWP-----PLPWHLRLVIAHQI 440
G C + D +M++EY+ +G L L P L L IA QI
Sbjct: 83 YGVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQI 142
Query: 441 AEGLTYLHSAAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDSHIFTTAQG 500
A G+ YL S HRD+ + N L+ L K+ DFG+SR V T+ +
Sbjct: 143 ASGMVYLASQH---FVHRDLATRNCLVGANLLVKIGDFGMSRDVYSTD-----YYRVGGH 194
Query: 501 TM---GYLDPE--YYRNFQLTDKSDVYSFGVVLLELLTSKKAIDFNREEENVNLVVYMKK 555
TM ++ PE YR F T +SDV+SFGV+L E+ T K F V + +
Sbjct: 195 TMLPIRWMPPESIMYRKF--TTESDVWSFGVILWEIFTYGKQPWFQLSNTEVIECITQGR 252
Query: 556 IMDEERL--MEVVDPVL 570
+++ R+ EV D +L
Sbjct: 253 VLERPRVCPKEVYDVML 269
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex
With An Hydantoin Inhibitor
Length = 305
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 65/232 (28%), Positives = 109/232 (46%), Gaps = 21/232 (9%)
Query: 316 SARIFTGKEIRRATNNFSKDNLIGTGGFGEVF----KGILDDG--TVTAIKRA-KLGNTK 368
+A +F E A + +G G FG V+ KG++ D T AIK + + +
Sbjct: 2 AADVFVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMR 61
Query: 369 GTDLVLNEVRILCQVNHRSLVRLLGCCVELDQTLMIYEYIPNGTLFDHLHC-----DFTG 423
LNE ++ + N +VRLLG + TL+I E + G L +L +
Sbjct: 62 ERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNP 121
Query: 424 KWPPLPWHLRLVIAHQIAEGLTYLHSAAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRL 483
P + +A +IA+G+ YL++ HRD+ + N ++ E K+ DFG++R
Sbjct: 122 VLAPPSLSKMIQMAGEIADGMAYLNANK---FVHRDLAARNCMVAEDFTVKIGDFGMTRD 178
Query: 484 VERTETNDSHIFTTAQGTM--GYLDPEYYRNFQLTDKSDVYSFGVVLLELLT 533
+ T+ + +G + ++ PE ++ T SDV+SFGVVL E+ T
Sbjct: 179 IYETD----YYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 226
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 68/227 (29%), Positives = 101/227 (44%), Gaps = 25/227 (11%)
Query: 327 RATNNFSKDNLIGTGGFGEVF--KGILDDGTVTAIKRAKLGNTK-GTDLVLNEVRILCQV 383
R +F +G GGFG VF K +DD AIKR +L N + + V+ EV+ L ++
Sbjct: 2 RYLTDFEPIQCLGRGGFGVVFEAKNKVDDCNY-AIKRIRLPNRELAREKVMREVKALAKL 60
Query: 384 NHRSLVRLLGCCVELDQTLMIYEYIPNGTLFDHLHC-------DFTGKWPPLPWHLRLVI 436
H +VR +E + T + P L+ + D+ + R V
Sbjct: 61 EHPGIVRYFNAWLEKNTTEKLQPSSPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVC 120
Query: 437 AH---QIAEGLTYLHSAAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDSH 493
H QIAE + +LHS + HRD+K SNI KV DFGL +++ E +
Sbjct: 121 LHIFLQIAEAVEFLHSKG---LMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTV 177
Query: 494 I--------FTTAQGTMGYLDPEYYRNFQLTDKSDVYSFGVVLLELL 532
+ T GT Y+ PE + K D++S G++L ELL
Sbjct: 178 LTPMPAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELL 224
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 110/215 (51%), Gaps = 26/215 (12%)
Query: 330 NNFSKDNLIGTGGFGEVFKGI-LDDGTVT----AIKRAKLGNT-KGTDLVLNEVRILCQV 383
F K ++G+G FG V+KG+ + +G AIK + + K +L+E ++ V
Sbjct: 19 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 78
Query: 384 NHRSLVRLLGCCVELDQTLMIYEYIPNGTLFDHL--HCDFTGKWPPLPWHLRLVIAHQIA 441
++ + RLLG C+ +I + +P G L D++ H D G L W + QIA
Sbjct: 79 DNPHVCRLLGICLT-STVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCV------QIA 131
Query: 442 EGLTYLHSAAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDSHIFTTAQG- 500
+G+ YL + HRD+ + N+L+ + K++DFG ++L+ E + H A+G
Sbjct: 132 KGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGRAKLLG-AEEKEYH----AEGG 183
Query: 501 --TMGYLDPEYYRNFQLTDKSDVYSFGVVLLELLT 533
+ ++ E + T +SDV+S+GV + EL+T
Sbjct: 184 KVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 218
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 68/212 (32%), Positives = 101/212 (47%), Gaps = 34/212 (16%)
Query: 338 IGTGGFGEVFKGILD---DGT--VTAIK--RAKLGNTKGTDLVLNEVRILCQVNHRSLVR 390
+G G FG+V D DGT + A+K +A G + E+ IL + H +++
Sbjct: 22 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADCGPQHRSGWK-QEIDILRTLYHEHIIK 80
Query: 391 LLGCCVELDQT--LMIYEYIPNGTLFDHLHCDFTGKWPPLPWHLRLVIAHQIAEGLTYLH 448
GCC + + ++ EY+P G+L D+L G L+ A QI EG+ YLH
Sbjct: 81 YKGCCEDQGEKSLQLVMEYVPLGSLRDYLPRHSIG------LAQLLLFAQQICEGMAYLH 134
Query: 449 SAAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVER-------TETNDSHIFTTAQGT 501
+ HR++ + N+LLD K+ DFGL++ V E DS +F A
Sbjct: 135 AQHY---IHRNLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYA--- 188
Query: 502 MGYLDPEYYRNFQLTDKSDVYSFGVVLLELLT 533
PE + ++ SDV+SFGV L ELLT
Sbjct: 189 -----PECLKEYKFYYASDVWSFGVTLYELLT 215
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 62/206 (30%), Positives = 95/206 (46%), Gaps = 15/206 (7%)
Query: 338 IGTGGFGEVFKGILDDGTVTAIKRAKLGNTKGTDLVLNEVRILC---QVNHRSLVRLLGC 394
+G G GEV + + T A+ + + D N + +C +NH ++V+ G
Sbjct: 14 LGEGAAGEVQLAV-NRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGH 72
Query: 395 CVELDQTLMIYEYIPNGTLFDHLHCDFTGKWPPLPWHLRLVIAHQIAEGLTYLHSAAVPP 454
E + + EY G LFD + D P P R HQ+ G+ YLH
Sbjct: 73 RREGNIQYLFLEYCSGGELFDRIEPDIGM---PEPDAQRFF--HQLMAGVVYLHGIG--- 124
Query: 455 IYHRDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDSHIFTTAQGTMGYLDPEYYRNFQ 514
I HRD+K N+LLDE+ N K+SDFGL+ + N + GT+ Y+ PE + +
Sbjct: 125 ITHRDIKPENLLLDERDNLKISDFGLATVFRY--NNRERLLNKMCGTLPYVAPELLKRRE 182
Query: 515 L-TDKSDVYSFGVVLLELLTSKKAID 539
+ DV+S G+VL +L + D
Sbjct: 183 FHAEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 108/212 (50%), Gaps = 20/212 (9%)
Query: 330 NNFSKDNLIGTGGFGEVFKGI-LDDGTVT----AIKRAKLGNT-KGTDLVLNEVRILCQV 383
F K ++ +G FG V+KG+ + +G AIK + + K +L+E ++ V
Sbjct: 22 TEFKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 81
Query: 384 NHRSLVRLLGCCVELDQTLMIYEYIPNGTLFDHL--HCDFTGKWPPLPWHLRLVIAHQIA 441
++ + RLLG C+ +I + +P G L D++ H D G L W + QIA
Sbjct: 82 DNPHVCRLLGICLT-STVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCV------QIA 134
Query: 442 EGLTYLHSAAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDSHIFTTAQGT 501
+G+ YL + HRD+ + N+L+ + K++DFGL++L+ E + H +
Sbjct: 135 KGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLG-AEEKEYHA-EGGKVP 189
Query: 502 MGYLDPEYYRNFQLTDKSDVYSFGVVLLELLT 533
+ ++ E + T +SDV+S+GV + EL+T
Sbjct: 190 IKWMALESILHRIYTHQSDVWSYGVTVWELMT 221
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 108/212 (50%), Gaps = 20/212 (9%)
Query: 330 NNFSKDNLIGTGGFGEVFKGI-LDDGTVT----AIKRAKLGNT-KGTDLVLNEVRILCQV 383
F K ++G+G FG V+KG+ + +G AIK + + K +L+E ++ V
Sbjct: 17 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 76
Query: 384 NHRSLVRLLGCCVELDQTLMIYEYIPNGTLFDHL--HCDFTGKWPPLPWHLRLVIAHQIA 441
++ + RLLG C+ +I + +P G L D++ H D G L W + QIA
Sbjct: 77 DNPHVCRLLGICLT-STVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCV------QIA 129
Query: 442 EGLTYLHSAAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDSHIFTTAQGT 501
+G+ YL + HRD+ + N+L+ + K++DFG ++L+ E + H +
Sbjct: 130 KGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGRAKLLG-AEEKEYHA-EGGKVP 184
Query: 502 MGYLDPEYYRNFQLTDKSDVYSFGVVLLELLT 533
+ ++ E + T +SDV+S+GV + EL+T
Sbjct: 185 IKWMALESILHRIYTHQSDVWSYGVTVWELMT 216
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 108/212 (50%), Gaps = 20/212 (9%)
Query: 330 NNFSKDNLIGTGGFGEVFKGI-LDDGTVT----AIKRAKLGNT-KGTDLVLNEVRILCQV 383
F K ++G+G FG V+KG+ + +G AIK + + K +L+E ++ V
Sbjct: 17 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 76
Query: 384 NHRSLVRLLGCCVELDQTLMIYEYIPNGTLFDHL--HCDFTGKWPPLPWHLRLVIAHQIA 441
++ + RLLG C+ +I + +P G L D++ H D G L W + QIA
Sbjct: 77 DNPHVCRLLGICLT-STVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCV------QIA 129
Query: 442 EGLTYLHSAAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDSHIFTTAQGT 501
+G+ YL + HRD+ + N+L+ + K++DFG ++L+ E + H +
Sbjct: 130 KGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGRAKLLG-AEEKEYHA-EGGKVP 184
Query: 502 MGYLDPEYYRNFQLTDKSDVYSFGVVLLELLT 533
+ ++ E + T +SDV+S+GV + EL+T
Sbjct: 185 IKWMALESILHRIYTHQSDVWSYGVTVWELMT 216
>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|3F5P|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|E Chain E, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|F Chain F, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|G Chain G, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|H Chain H, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|I Chain I, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|J Chain J, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|K Chain K, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|M Chain M, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|L Chain L, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|R Chain R, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|S Chain S, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|T Chain T, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
Length = 308
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 64/230 (27%), Positives = 107/230 (46%), Gaps = 17/230 (7%)
Query: 316 SARIFTGKEIRRATNNFSKDNLIGTGGFGEVF----KGILDDG--TVTAIKRA-KLGNTK 368
+A ++ E A + +G G FG V+ KG++ D T AIK + + +
Sbjct: 5 AADVYVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMR 64
Query: 369 GTDLVLNEVRILCQVNHRSLVRLLGCCVELDQTLMIYEYIPNGTLFDHLHC-----DFTG 423
LNE ++ + N +VRLLG + TL+I E + G L +L +
Sbjct: 65 ERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNP 124
Query: 424 KWPPLPWHLRLVIAHQIAEGLTYLHSAAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRL 483
P + +A +IA+G+ YL++ HRD+ + N ++ E K+ DFG++R
Sbjct: 125 VLAPPSLSKMIQMAGEIADGMAYLNANK---FVHRDLAARNCMVAEDFTVKIGDFGMTRD 181
Query: 484 VERTETNDSHIFTTAQGTMGYLDPEYYRNFQLTDKSDVYSFGVVLLELLT 533
+ ET+ + ++ PE ++ T SDV+SFGVVL E+ T
Sbjct: 182 I--XETDXXRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 229
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 110/215 (51%), Gaps = 26/215 (12%)
Query: 330 NNFSKDNLIGTGGFGEVFKGI-LDDGTVT----AIKRAKLGNT-KGTDLVLNEVRILCQV 383
F K ++ +G FG V+KG+ + +G AIK + + K +L+E ++ V
Sbjct: 22 TEFKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 81
Query: 384 NHRSLVRLLGCCVELDQTLMIYEYIPNGTLFDHL--HCDFTGKWPPLPWHLRLVIAHQIA 441
++ + RLLG C+ +I + +P G L D++ H D G L W + QIA
Sbjct: 82 DNPHVCRLLGICLT-STVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCV------QIA 134
Query: 442 EGLTYLHSAAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDSHIFTTAQG- 500
+G+ YL + HRD+ + N+L+ + K++DFGL++L+ E + H A+G
Sbjct: 135 KGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLG-AEEKEYH----AEGG 186
Query: 501 --TMGYLDPEYYRNFQLTDKSDVYSFGVVLLELLT 533
+ ++ E + T +SDV+S+GV + EL+T
Sbjct: 187 KVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 221
>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Aee788
pdb|2ITU|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Afn941
pdb|2ITV|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Amp-pnp
pdb|2ITZ|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Iressa
Length = 327
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 110/215 (51%), Gaps = 26/215 (12%)
Query: 330 NNFSKDNLIGTGGFGEVFKGI-LDDGTVT----AIKRAKLGNT-KGTDLVLNEVRILCQV 383
F K ++G+G FG V+KG+ + +G AIK + + K +L+E ++ V
Sbjct: 15 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 74
Query: 384 NHRSLVRLLGCCVELDQTLMIYEYIPNGTLFDHL--HCDFTGKWPPLPWHLRLVIAHQIA 441
++ + RLLG C+ +I + +P G L D++ H D G L W + QIA
Sbjct: 75 DNPHVCRLLGICLT-STVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCV------QIA 127
Query: 442 EGLTYLHSAAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDSHIFTTAQG- 500
+G+ YL + HRD+ + N+L+ + K++DFG ++L+ E + H A+G
Sbjct: 128 KGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGRAKLLG-AEEKEYH----AEGG 179
Query: 501 --TMGYLDPEYYRNFQLTDKSDVYSFGVVLLELLT 533
+ ++ E + T +SDV+S+GV + EL+T
Sbjct: 180 KVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 214
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 110/215 (51%), Gaps = 26/215 (12%)
Query: 330 NNFSKDNLIGTGGFGEVFKGI-LDDGTVT----AIKRAKLGNT-KGTDLVLNEVRILCQV 383
F K ++ +G FG V+KG+ + +G AIK + + K +L+E ++ V
Sbjct: 15 TEFKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 74
Query: 384 NHRSLVRLLGCCVELDQTLMIYEYIPNGTLFDHL--HCDFTGKWPPLPWHLRLVIAHQIA 441
++ + RLLG C+ +I + +P G L D++ H D G L W + QIA
Sbjct: 75 DNPHVCRLLGICLT-STVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCV------QIA 127
Query: 442 EGLTYLHSAAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDSHIFTTAQG- 500
+G+ YL + HRD+ + N+L+ + K++DFGL++L+ E + H A+G
Sbjct: 128 KGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLL-GAEEKEYH----AEGG 179
Query: 501 --TMGYLDPEYYRNFQLTDKSDVYSFGVVLLELLT 533
+ ++ E + T +SDV+S+GV + EL+T
Sbjct: 180 KVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 214
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 110/215 (51%), Gaps = 26/215 (12%)
Query: 330 NNFSKDNLIGTGGFGEVFKGI-LDDGTVT----AIKRAKLGNT-KGTDLVLNEVRILCQV 383
F K ++G+G FG V+KG+ + +G AIK + + K +L+E ++ V
Sbjct: 17 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 76
Query: 384 NHRSLVRLLGCCVELDQTLMIYEYIPNGTLFDHL--HCDFTGKWPPLPWHLRLVIAHQIA 441
++ + RLLG C+ +I + +P G L D++ H D G L W + QIA
Sbjct: 77 DNPHVCRLLGICLT-STVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCV------QIA 129
Query: 442 EGLTYLHSAAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDSHIFTTAQG- 500
+G+ YL + HRD+ + N+L+ + K++DFG ++L+ E + H A+G
Sbjct: 130 KGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGRAKLLG-AEEKEYH----AEGG 181
Query: 501 --TMGYLDPEYYRNFQLTDKSDVYSFGVVLLELLT 533
+ ++ E + T +SDV+S+GV + EL+T
Sbjct: 182 KVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 216
>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In
Complex With Amppnp
Length = 334
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 108/212 (50%), Gaps = 20/212 (9%)
Query: 330 NNFSKDNLIGTGGFGEVFKGI-LDDGTVT----AIKRAKLGNT-KGTDLVLNEVRILCQV 383
F K ++G+G FG V+KG+ + +G AIK + + K +L+E ++ V
Sbjct: 22 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 81
Query: 384 NHRSLVRLLGCCVELDQTLMIYEYIPNGTLFDHL--HCDFTGKWPPLPWHLRLVIAHQIA 441
++ + RLLG C+ +I + +P G L D++ H D G L W + QIA
Sbjct: 82 DNPHVCRLLGICLT-STVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCV------QIA 134
Query: 442 EGLTYLHSAAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDSHIFTTAQGT 501
+G+ YL + HRD+ + N+L+ + K++DFG ++L+ E + H +
Sbjct: 135 KGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGRAKLLG-AEEKEYHA-EGGKVP 189
Query: 502 MGYLDPEYYRNFQLTDKSDVYSFGVVLLELLT 533
+ ++ E + T +SDV+S+GV + EL+T
Sbjct: 190 IKWMALESILHRIYTHQSDVWSYGVTVWELMT 221
>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With Bms-754807
[1-(4-((5-Cyclopropyl-
1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2,
4]triazin-2-Yl)-N-
(6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide]
Length = 315
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 64/232 (27%), Positives = 109/232 (46%), Gaps = 21/232 (9%)
Query: 316 SARIFTGKEIRRATNNFSKDNLIGTGGFGEVF----KGILDDG--TVTAIKRA-KLGNTK 368
+A ++ E A + +G G FG V+ KG++ D T AIK + + +
Sbjct: 4 AADVYVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMR 63
Query: 369 GTDLVLNEVRILCQVNHRSLVRLLGCCVELDQTLMIYEYIPNGTLFDHLHC-----DFTG 423
LNE ++ + N +VRLLG + TL+I E + G L +L +
Sbjct: 64 ERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNP 123
Query: 424 KWPPLPWHLRLVIAHQIAEGLTYLHSAAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRL 483
P + +A +IA+G+ YL++ HRD+ + N ++ E K+ DFG++R
Sbjct: 124 VLAPPSLSKMIQMAGEIADGMAYLNANK---FVHRDLAARNCMVAEDFTVKIGDFGMTRD 180
Query: 484 VERTETNDSHIFTTAQGTM--GYLDPEYYRNFQLTDKSDVYSFGVVLLELLT 533
+ T+ + +G + ++ PE ++ T SDV+SFGVVL E+ T
Sbjct: 181 IYETD----YYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 228
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 70/225 (31%), Positives = 103/225 (45%), Gaps = 34/225 (15%)
Query: 330 NNFSKDNLIGTGGFGEVFKG-ILDDGTV--TAIKRAKLGNTKGTDL-VLNEVRILCQVNH 385
N+ ++IG G FG+V K I DG AIKR K +K E+ +LC++ H
Sbjct: 25 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGH 84
Query: 386 R-SLVRLLGCCVELDQTLMIYEYIPNGTLFDHLHCDFTGKWPP-----------LPWHLR 433
+++ LLG C + EY P+G L D L + P L
Sbjct: 85 HPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQL 144
Query: 434 LVIAHQIAEGLTYLHSAAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDSH 493
L A +A G+ YL + HRD+ + NIL+ E AK++DFGLSR E
Sbjct: 145 LHFAADVARGMDYL---SQKQFIHRDLAARNILVGENYVAKIADFGLSRGQE-------- 193
Query: 494 IFTTAQGTMGYLDPEYYR----NFQL-TDKSDVYSFGVVLLELLT 533
+ TMG L + N+ + T SDV+S+GV+L E+++
Sbjct: 194 --VYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVS 236
>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
Length = 322
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 64/232 (27%), Positives = 109/232 (46%), Gaps = 21/232 (9%)
Query: 316 SARIFTGKEIRRATNNFSKDNLIGTGGFGEVF----KGILDDG--TVTAIKRA-KLGNTK 368
+A ++ E A + +G G FG V+ KG++ D T AIK + + +
Sbjct: 11 AADVYVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMR 70
Query: 369 GTDLVLNEVRILCQVNHRSLVRLLGCCVELDQTLMIYEYIPNGTLFDHLHC-----DFTG 423
LNE ++ + N +VRLLG + TL+I E + G L +L +
Sbjct: 71 ERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNP 130
Query: 424 KWPPLPWHLRLVIAHQIAEGLTYLHSAAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRL 483
P + +A +IA+G+ YL++ HRD+ + N ++ E K+ DFG++R
Sbjct: 131 VLAPPSLSKMIQMAGEIADGMAYLNANK---FVHRDLAARNCMVAEDFTVKIGDFGMTRD 187
Query: 484 VERTETNDSHIFTTAQGTM--GYLDPEYYRNFQLTDKSDVYSFGVVLLELLT 533
+ T+ + +G + ++ PE ++ T SDV+SFGVVL E+ T
Sbjct: 188 IYETD----YYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 235
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 70/225 (31%), Positives = 103/225 (45%), Gaps = 34/225 (15%)
Query: 330 NNFSKDNLIGTGGFGEVFKG-ILDDGTV--TAIKRAKLGNTKGTDL-VLNEVRILCQVNH 385
N+ ++IG G FG+V K I DG AIKR K +K E+ +LC++ H
Sbjct: 15 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGH 74
Query: 386 R-SLVRLLGCCVELDQTLMIYEYIPNGTLFDHLHCDFTGKWPP-----------LPWHLR 433
+++ LLG C + EY P+G L D L + P L
Sbjct: 75 HPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQL 134
Query: 434 LVIAHQIAEGLTYLHSAAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDSH 493
L A +A G+ YL + HRD+ + NIL+ E AK++DFGLSR E
Sbjct: 135 LHFAADVARGMDYL---SQKQFIHRDLAARNILVGENYVAKIADFGLSRGQE-------- 183
Query: 494 IFTTAQGTMGYLDPEYYR----NFQL-TDKSDVYSFGVVLLELLT 533
+ TMG L + N+ + T SDV+S+GV+L E+++
Sbjct: 184 --VYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVS 226
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 102/205 (49%), Gaps = 15/205 (7%)
Query: 334 KDNLIGTGGFGEVFKGILD-----DGTVTAIKRAKLGNTKGTDLVLNEVRILCQVNHRSL 388
+D +G+G FG V KG I + + + D +L E ++ Q+++ +
Sbjct: 31 EDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYI 90
Query: 389 VRLLGCCVELDQTLMIYEYIPNGTLFDHLHCDFTGKWPPLPWHLRLVIAHQIAEGLTYLH 448
VR++G C E + +++ E G L +L + K + + + HQ++ G+ YL
Sbjct: 91 VRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNI-----IELVHQVSMGMKYLE 144
Query: 449 SAAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDSHIFTTAQGTMGYLDPE 508
+ HRD+ + N+LL + AK+SDFGLS+ + R + N T + + + PE
Sbjct: 145 ESN---FVHRDLAARNVLLVTQHYAKISDFGLSKAL-RADENYYKAQTHGKWPVKWYAPE 200
Query: 509 YYRNFQLTDKSDVYSFGVVLLELLT 533
++ + KSDV+SFGV++ E +
Sbjct: 201 CINYYKFSSKSDVWSFGVLMWEAFS 225
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 102/205 (49%), Gaps = 15/205 (7%)
Query: 334 KDNLIGTGGFGEVFKGILD-----DGTVTAIKRAKLGNTKGTDLVLNEVRILCQVNHRSL 388
+D +G+G FG V KG I + + + D +L E ++ Q+++ +
Sbjct: 31 EDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYI 90
Query: 389 VRLLGCCVELDQTLMIYEYIPNGTLFDHLHCDFTGKWPPLPWHLRLVIAHQIAEGLTYLH 448
VR++G C E + +++ E G L +L + K + + + HQ++ G+ YL
Sbjct: 91 VRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNI-----IELVHQVSMGMKYLE 144
Query: 449 SAAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDSHIFTTAQGTMGYLDPE 508
+ HRD+ + N+LL + AK+SDFGLS+ + R + N T + + + PE
Sbjct: 145 ESN---FVHRDLAARNVLLVTQHYAKISDFGLSKAL-RADENYYKAQTHGKWPVKWYAPE 200
Query: 509 YYRNFQLTDKSDVYSFGVVLLELLT 533
++ + KSDV+SFGV++ E +
Sbjct: 201 CINYYKFSSKSDVWSFGVLMWEAFS 225
>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A
Benzimidazole Inhibitor
pdb|3NW5|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11b)
pdb|3NW6|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11a)
pdb|3NW7|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (34)
Length = 307
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 64/232 (27%), Positives = 109/232 (46%), Gaps = 21/232 (9%)
Query: 316 SARIFTGKEIRRATNNFSKDNLIGTGGFGEVF----KGILDDG--TVTAIKRA-KLGNTK 368
+A ++ E A + +G G FG V+ KG++ D T AIK + + +
Sbjct: 4 AADVYVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMR 63
Query: 369 GTDLVLNEVRILCQVNHRSLVRLLGCCVELDQTLMIYEYIPNGTLFDHLHC-----DFTG 423
LNE ++ + N +VRLLG + TL+I E + G L +L +
Sbjct: 64 ERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNP 123
Query: 424 KWPPLPWHLRLVIAHQIAEGLTYLHSAAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRL 483
P + +A +IA+G+ YL++ HRD+ + N ++ E K+ DFG++R
Sbjct: 124 VLAPPSLSKMIQMAGEIADGMAYLNANK---FVHRDLAARNCMVAEDFTVKIGDFGMTRD 180
Query: 484 VERTETNDSHIFTTAQGTM--GYLDPEYYRNFQLTDKSDVYSFGVVLLELLT 533
+ T+ + +G + ++ PE ++ T SDV+SFGVVL E+ T
Sbjct: 181 IYETD----YYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 228
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 64/232 (27%), Positives = 109/232 (46%), Gaps = 21/232 (9%)
Query: 316 SARIFTGKEIRRATNNFSKDNLIGTGGFGEVF----KGILDDG--TVTAIKRA-KLGNTK 368
+A ++ E A + +G G FG V+ KG++ D T AIK + + +
Sbjct: 5 AADVYVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMR 64
Query: 369 GTDLVLNEVRILCQVNHRSLVRLLGCCVELDQTLMIYEYIPNGTLFDHLHC-----DFTG 423
LNE ++ + N +VRLLG + TL+I E + G L +L +
Sbjct: 65 ERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNP 124
Query: 424 KWPPLPWHLRLVIAHQIAEGLTYLHSAAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRL 483
P + +A +IA+G+ YL++ HRD+ + N ++ E K+ DFG++R
Sbjct: 125 VLAPPSLSKMIQMAGEIADGMAYLNANK---FVHRDLAARNCMVAEDFTVKIGDFGMTRD 181
Query: 484 VERTETNDSHIFTTAQGTM--GYLDPEYYRNFQLTDKSDVYSFGVVLLELLT 533
+ T+ + +G + ++ PE ++ T SDV+SFGVVL E+ T
Sbjct: 182 IYETD----YYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 229
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 102/205 (49%), Gaps = 15/205 (7%)
Query: 334 KDNLIGTGGFGEVFKGILD-----DGTVTAIKRAKLGNTKGTDLVLNEVRILCQVNHRSL 388
+D +G+G FG V KG I + + + D +L E ++ Q+++ +
Sbjct: 15 EDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYI 74
Query: 389 VRLLGCCVELDQTLMIYEYIPNGTLFDHLHCDFTGKWPPLPWHLRLVIAHQIAEGLTYLH 448
VR++G C E + +++ E G L +L + K + + + HQ++ G+ YL
Sbjct: 75 VRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNI-----IELVHQVSMGMKYLE 128
Query: 449 SAAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDSHIFTTAQGTMGYLDPE 508
+ HRD+ + N+LL + AK+SDFGLS+ + R + N T + + + PE
Sbjct: 129 ESN---FVHRDLAARNVLLVTQHYAKISDFGLSKAL-RADENXYKAQTHGKWPVKWYAPE 184
Query: 509 YYRNFQLTDKSDVYSFGVVLLELLT 533
++ + KSDV+SFGV++ E +
Sbjct: 185 CINYYKFSSKSDVWSFGVLMWEAFS 209
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 79.0 bits (193), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 102/205 (49%), Gaps = 15/205 (7%)
Query: 334 KDNLIGTGGFGEVFKGILD-----DGTVTAIKRAKLGNTKGTDLVLNEVRILCQVNHRSL 388
+D +G+G FG V KG I + + + D +L E ++ Q+++ +
Sbjct: 29 EDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYI 88
Query: 389 VRLLGCCVELDQTLMIYEYIPNGTLFDHLHCDFTGKWPPLPWHLRLVIAHQIAEGLTYLH 448
VR++G C E + +++ E G L +L + K + + + HQ++ G+ YL
Sbjct: 89 VRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNI-----IELVHQVSMGMKYLE 142
Query: 449 SAAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDSHIFTTAQGTMGYLDPE 508
+ HRD+ + N+LL + AK+SDFGLS+ + R + N T + + + PE
Sbjct: 143 ESN---FVHRDLAARNVLLVTQHYAKISDFGLSKAL-RADENYYKAQTHGKWPVKWYAPE 198
Query: 509 YYRNFQLTDKSDVYSFGVVLLELLT 533
++ + KSDV+SFGV++ E +
Sbjct: 199 CINYYKFSSKSDVWSFGVLMWEAFS 223
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 79.0 bits (193), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 102/205 (49%), Gaps = 15/205 (7%)
Query: 334 KDNLIGTGGFGEVFKGILD-----DGTVTAIKRAKLGNTKGTDLVLNEVRILCQVNHRSL 388
+D +G+G FG V KG I + + + D +L E ++ Q+++ +
Sbjct: 374 EDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYI 433
Query: 389 VRLLGCCVELDQTLMIYEYIPNGTLFDHLHCDFTGKWPPLPWHLRLVIAHQIAEGLTYLH 448
VR++G C E + +++ E G L +L + K + + + HQ++ G+ YL
Sbjct: 434 VRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNI-----IELVHQVSMGMKYLE 487
Query: 449 SAAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDSHIFTTAQGTMGYLDPE 508
+ HRD+ + N+LL + AK+SDFGLS+ + R + N T + + + PE
Sbjct: 488 ESN---FVHRDLAARNVLLVTQHYAKISDFGLSKAL-RADENYYKAQTHGKWPVKWYAPE 543
Query: 509 YYRNFQLTDKSDVYSFGVVLLELLT 533
++ + KSDV+SFGV++ E +
Sbjct: 544 CINYYKFSSKSDVWSFGVLMWEAFS 568
>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution.
pdb|1P4O|B Chain B, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution
Length = 322
Score = 79.0 bits (193), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 68/232 (29%), Positives = 111/232 (47%), Gaps = 21/232 (9%)
Query: 316 SARIFTGKEIRRATNNFSKDNLIGTGGFGEVF----KGILDDG--TVTAIKRA-KLGNTK 368
+A ++ E A + +G G FG V+ KG++ D T AIK + + +
Sbjct: 11 AADVYVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMR 70
Query: 369 GTDLVLNEVRILCQVNHRSLVRLLGCCVELDQTLMIYEYIPNGTLFDHLHC--DFTGKWP 426
LNE ++ + N +VRLLG + TL+I E + G L +L P
Sbjct: 71 ERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNP 130
Query: 427 PL-PWHLRLVI--AHQIAEGLTYLHSAAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRL 483
L P L +I A +IA+G+ YL++ HRD+ + N ++ E K+ DFG++R
Sbjct: 131 VLAPPSLSKMIQMAGEIADGMAYLNANK---FVHRDLAARNCMVAEDFTVKIGDFGMTRD 187
Query: 484 VERTETNDSHIFTTAQGTM--GYLDPEYYRNFQLTDKSDVYSFGVVLLELLT 533
+ T+ + +G + ++ PE ++ T SDV+SFGVVL E+ T
Sbjct: 188 IYETD----YYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 235
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 79.0 bits (193), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 102/205 (49%), Gaps = 15/205 (7%)
Query: 334 KDNLIGTGGFGEVFKGILD-----DGTVTAIKRAKLGNTKGTDLVLNEVRILCQVNHRSL 388
+D +G+G FG V KG I + + + D +L E ++ Q+++ +
Sbjct: 373 EDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYI 432
Query: 389 VRLLGCCVELDQTLMIYEYIPNGTLFDHLHCDFTGKWPPLPWHLRLVIAHQIAEGLTYLH 448
VR++G C E + +++ E G L +L + K + + + HQ++ G+ YL
Sbjct: 433 VRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNI-----IELVHQVSMGMKYLE 486
Query: 449 SAAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDSHIFTTAQGTMGYLDPE 508
+ HRD+ + N+LL + AK+SDFGLS+ + R + N T + + + PE
Sbjct: 487 ESN---FVHRDLAARNVLLVTQHYAKISDFGLSKAL-RADENYYKAQTHGKWPVKWYAPE 542
Query: 509 YYRNFQLTDKSDVYSFGVVLLELLT 533
++ + KSDV+SFGV++ E +
Sbjct: 543 CINYYKFSSKSDVWSFGVLMWEAFS 567
>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor
Kinase
Length = 299
Score = 79.0 bits (193), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 64/222 (28%), Positives = 106/222 (47%), Gaps = 19/222 (8%)
Query: 324 EIRRATNNFSKDNLIGTGGFGEVF----KGILDDG--TVTAIKRA-KLGNTKGTDLVLNE 376
E+ R S++ +G G FG V+ KG++ D T AIK + + + LNE
Sbjct: 6 EVAREKITMSRE--LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNE 63
Query: 377 VRILCQVNHRSLVRLLGCCVELDQTLMIYEYIPNGTLFDHLHC-----DFTGKWPPLPWH 431
++ + N +VRLLG + TL+I E + G L +L + P
Sbjct: 64 ASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLS 123
Query: 432 LRLVIAHQIAEGLTYLHSAAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVERTETND 491
+ +A +IA+G+ YL++ HRD+ + N ++ E K+ DFG++R + ET+
Sbjct: 124 KMIQMAGEIADGMAYLNANK---FVHRDLAARNCMVAEDFTVKIGDFGMTRDI--XETDX 178
Query: 492 SHIFTTAQGTMGYLDPEYYRNFQLTDKSDVYSFGVVLLELLT 533
+ ++ PE ++ T SDV+SFGVVL E+ T
Sbjct: 179 XRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 220
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 78.6 bits (192), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 102/205 (49%), Gaps = 15/205 (7%)
Query: 334 KDNLIGTGGFGEVFKGILD-----DGTVTAIKRAKLGNTKGTDLVLNEVRILCQVNHRSL 388
+D +G+G FG V KG I + + + D +L E ++ Q+++ +
Sbjct: 21 EDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYI 80
Query: 389 VRLLGCCVELDQTLMIYEYIPNGTLFDHLHCDFTGKWPPLPWHLRLVIAHQIAEGLTYLH 448
VR++G C E + +++ E G L +L + K + + + HQ++ G+ YL
Sbjct: 81 VRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNI-----IELVHQVSMGMKYLE 134
Query: 449 SAAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDSHIFTTAQGTMGYLDPE 508
+ HRD+ + N+LL + AK+SDFGLS+ + R + N T + + + PE
Sbjct: 135 ESN---FVHRDLAARNVLLVTQHYAKISDFGLSKAL-RADENYYKAQTHGKWPVKWYAPE 190
Query: 509 YYRNFQLTDKSDVYSFGVVLLELLT 533
++ + KSDV+SFGV++ E +
Sbjct: 191 CINYYKFSSKSDVWSFGVLMWEAFS 215
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 78.6 bits (192), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 102/205 (49%), Gaps = 15/205 (7%)
Query: 334 KDNLIGTGGFGEVFKGILD-----DGTVTAIKRAKLGNTKGTDLVLNEVRILCQVNHRSL 388
+D +G+G FG V KG I + + + D +L E ++ Q+++ +
Sbjct: 15 EDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYI 74
Query: 389 VRLLGCCVELDQTLMIYEYIPNGTLFDHLHCDFTGKWPPLPWHLRLVIAHQIAEGLTYLH 448
VR++G C E + +++ E G L +L + K + + + HQ++ G+ YL
Sbjct: 75 VRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNI-----IELVHQVSMGMKYLE 128
Query: 449 SAAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDSHIFTTAQGTMGYLDPE 508
+ HRD+ + N+LL + AK+SDFGLS+ + R + N T + + + PE
Sbjct: 129 ESN---FVHRDLAARNVLLVTQHYAKISDFGLSKAL-RADENYYKAQTHGKWPVKWYAPE 184
Query: 509 YYRNFQLTDKSDVYSFGVVLLELLT 533
++ + KSDV+SFGV++ E +
Sbjct: 185 CINYYKFSSKSDVWSFGVLMWEAFS 209
>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|B Chain B, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|C Chain C, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|D Chain D, Igf-1rk In Complex With Ligand Msc1609119a-1
Length = 304
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 68/232 (29%), Positives = 111/232 (47%), Gaps = 21/232 (9%)
Query: 316 SARIFTGKEIRRATNNFSKDNLIGTGGFGEVF----KGILDDG--TVTAIKRA-KLGNTK 368
+A ++ E A + +G G FG V+ KG++ D T AIK + + +
Sbjct: 1 AADVYVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMR 60
Query: 369 GTDLVLNEVRILCQVNHRSLVRLLGCCVELDQTLMIYEYIPNGTLFDHLHC--DFTGKWP 426
LNE ++ + N +VRLLG + TL+I E + G L +L P
Sbjct: 61 ERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNP 120
Query: 427 PL-PWHLRLVI--AHQIAEGLTYLHSAAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRL 483
L P L +I A +IA+G+ YL++ HRD+ + N ++ E K+ DFG++R
Sbjct: 121 VLAPPSLSKMIQMAGEIADGMAYLNANK---FVHRDLAARNCMVAEDFTVKIGDFGMTRD 177
Query: 484 VERTETNDSHIFTTAQGTM--GYLDPEYYRNFQLTDKSDVYSFGVVLLELLT 533
+ T+ + +G + ++ PE ++ T SDV+SFGVVL E+ T
Sbjct: 178 IYETD----YYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 225
>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|B Chain B, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|C Chain C, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|D Chain D, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
Length = 336
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 64/232 (27%), Positives = 109/232 (46%), Gaps = 21/232 (9%)
Query: 316 SARIFTGKEIRRATNNFSKDNLIGTGGFGEVF----KGILDDG--TVTAIKRA-KLGNTK 368
+A ++ E A + +G G FG V+ KG++ D T AIK + + +
Sbjct: 33 AADVYVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMR 92
Query: 369 GTDLVLNEVRILCQVNHRSLVRLLGCCVELDQTLMIYEYIPNGTLFDHLHC-----DFTG 423
LNE ++ + N +VRLLG + TL+I E + G L +L +
Sbjct: 93 ERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNP 152
Query: 424 KWPPLPWHLRLVIAHQIAEGLTYLHSAAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRL 483
P + +A +IA+G+ YL++ HRD+ + N ++ E K+ DFG++R
Sbjct: 153 VLAPPSLSKMIQMAGEIADGMAYLNANK---FVHRDLAARNCMVAEDFTVKIGDFGMTRD 209
Query: 484 VERTETNDSHIFTTAQGTM--GYLDPEYYRNFQLTDKSDVYSFGVVLLELLT 533
+ T+ + +G + ++ PE ++ T SDV+SFGVVL E+ T
Sbjct: 210 IYETD----YYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 257
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 102/205 (49%), Gaps = 15/205 (7%)
Query: 334 KDNLIGTGGFGEVFKGILD-----DGTVTAIKRAKLGNTKGTDLVLNEVRILCQVNHRSL 388
+D +G+G FG V KG I + + + D +L E ++ Q+++ +
Sbjct: 11 EDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYI 70
Query: 389 VRLLGCCVELDQTLMIYEYIPNGTLFDHLHCDFTGKWPPLPWHLRLVIAHQIAEGLTYLH 448
VR++G C E + +++ E G L +L + K + + + HQ++ G+ YL
Sbjct: 71 VRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNI-----IELVHQVSMGMKYLE 124
Query: 449 SAAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDSHIFTTAQGTMGYLDPE 508
+ HRD+ + N+LL + AK+SDFGLS+ + R + N T + + + PE
Sbjct: 125 ESN---FVHRDLAARNVLLVTQHYAKISDFGLSKAL-RADENYYKAQTHGKWPVKWYAPE 180
Query: 509 YYRNFQLTDKSDVYSFGVVLLELLT 533
++ + KSDV+SFGV++ E +
Sbjct: 181 CINYYKFSSKSDVWSFGVLMWEAFS 205
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 102/205 (49%), Gaps = 15/205 (7%)
Query: 334 KDNLIGTGGFGEVFKGILD-----DGTVTAIKRAKLGNTKGTDLVLNEVRILCQVNHRSL 388
+D +G+G FG V KG I + + + D +L E ++ Q+++ +
Sbjct: 9 EDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYI 68
Query: 389 VRLLGCCVELDQTLMIYEYIPNGTLFDHLHCDFTGKWPPLPWHLRLVIAHQIAEGLTYLH 448
VR++G C E + +++ E G L +L + K + + + HQ++ G+ YL
Sbjct: 69 VRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNI-----IELVHQVSMGMKYLE 122
Query: 449 SAAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDSHIFTTAQGTMGYLDPE 508
+ HRD+ + N+LL + AK+SDFGLS+ + R + N T + + + PE
Sbjct: 123 ESN---FVHRDLAARNVLLVTQHYAKISDFGLSKAL-RADENYYKAQTHGKWPVKWYAPE 178
Query: 509 YYRNFQLTDKSDVYSFGVVLLELLT 533
++ + KSDV+SFGV++ E +
Sbjct: 179 CINYYKFSSKSDVWSFGVLMWEAFS 203
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 67/224 (29%), Positives = 103/224 (45%), Gaps = 22/224 (9%)
Query: 338 IGTGGFGEV-FKGILDDGTVTAIKRAKLGNTKGTDL--VLNEVRILCQVNHRSLVRLLGC 394
IGTGGF +V + G + AIK NT G+DL + E+ L + H+ + +L
Sbjct: 18 IGTGGFAKVKLACHILTGEMVAIKIMD-KNTLGSDLPRIKTEIEALKNLRHQHICQLYHV 76
Query: 395 CVELDQTLMIYEYIPNGTLFDHLHCDFTGKWPPLPWHLRLVIAHQIAEGLTYLHSAAVPP 454
++ M+ EY P G LFD++ L V+ QI + Y+HS
Sbjct: 77 LETANKIFMVLEYCPGGELFDYIISQ-----DRLSEEETRVVFRQIVSAVAYVHSQGYA- 130
Query: 455 IYHRDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDSHIFTTAQGTMGYLDPEYYR-NF 513
HRD+K N+L DE K+ DFG L + + N + T G++ Y PE +
Sbjct: 131 --HRDLKPENLLFDEYHKLKLIDFG---LCAKPKGNKDYHLQTCCGSLAYAAPELIQGKS 185
Query: 514 QLTDKSDVYSFGVVLLELLTSKKAIDFNREEENVNLVVYMKKIM 557
L ++DV+S G++L L+ D + N++ KKIM
Sbjct: 186 YLGSEADVWSMGILLYVLMCGFLPFD------DDNVMALYKKIM 223
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 64/219 (29%), Positives = 104/219 (47%), Gaps = 22/219 (10%)
Query: 330 NNFSKDNLIGTGGFGEVFK----GILDDGTVTAIKRAKLGNTKGTD---LVLNEVRILCQ 382
NN +G G FG+V + G+ + V + L +T D +++E++I+
Sbjct: 38 NNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSH 97
Query: 383 V-NHRSLVRLLGCCVELDQTLMIYEYIPNGTLFDHLHCDFTG---KWPPLPWHLR--LVI 436
+ H ++V LLG C L+I EY G L + L K P LR L
Sbjct: 98 LGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLELRDLLHF 157
Query: 437 AHQIAEGLTYLHSAAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDSHIFT 496
+ Q+A+G+ +L S HRDV + N+LL AK+ DFGL+R + NDS+
Sbjct: 158 SSQVAQGMAFLASKNC---IHRDVAARNVLLTNGHVAKIGDFGLARDI----MNDSNYIV 210
Query: 497 TAQGTM--GYLDPEYYRNFQLTDKSDVYSFGVVLLELLT 533
+ ++ PE + T +SDV+S+G++L E+ +
Sbjct: 211 KGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 249
>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
pdb|2I6L|B Chain B, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
Length = 320
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 66/252 (26%), Positives = 124/252 (49%), Gaps = 40/252 (15%)
Query: 338 IGTGGFGEVFKGILDD-GTVTAIKRAKLGNTKGTDLVLNEVRILCQVNHRSLVRL----- 391
+G GG G VF + +D AIK+ L + + L E++I+ +++H ++V++
Sbjct: 19 LGCGGNGLVFSAVDNDCDKRVAIKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVFEILG 78
Query: 392 ---------LGCCVELDQTLMIYEYIPNGTLFDHLHCDFTGKWPPLPWHLRLVIAHQIAE 442
+G EL+ ++ EY+ + + P L H RL + +Q+
Sbjct: 79 PSGSQLTDDVGSLTELNSVYIVQEYMETDL------ANVLEQGPLLEEHARLFM-YQLLR 131
Query: 443 GLTYLHSAAVPPIYHRDVKSSNILLD-EKLNAKVSDFGLSRLVERTETNDSHIFTTAQGT 501
GL Y+HSA V HRD+K +N+ ++ E L K+ DFGL+R+++ ++ H+ ++G
Sbjct: 132 GLKYIHSANV---LHRDLKPANLFINTEDLVLKIGDFGLARIMDPHYSHKGHL---SEG- 184
Query: 502 MGYLDPEYYRNFQL-------TDKSDVYSFGVVLLELLTSKKAIDFNREEENVNLVVYMK 554
L ++YR+ +L T D+++ G + E+LT K E E + L++
Sbjct: 185 ---LVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKTLFAGAHELEQMQLILESI 241
Query: 555 KIMDEERLMEVV 566
++ EE E++
Sbjct: 242 PVVHEEDRQELL 253
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 64/219 (29%), Positives = 104/219 (47%), Gaps = 22/219 (10%)
Query: 330 NNFSKDNLIGTGGFGEVFK----GILDDGTVTAIKRAKLGNTKGTD---LVLNEVRILCQ 382
NN +G G FG+V + G+ + V + L +T D +++E++I+
Sbjct: 46 NNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSH 105
Query: 383 V-NHRSLVRLLGCCVELDQTLMIYEYIPNGTLFDHLHCDFTG---KWPPLPWHLR--LVI 436
+ H ++V LLG C L+I EY G L + L K P LR L
Sbjct: 106 LGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLELRDLLHF 165
Query: 437 AHQIAEGLTYLHSAAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDSHIFT 496
+ Q+A+G+ +L S HRDV + N+LL AK+ DFGL+R + NDS+
Sbjct: 166 SSQVAQGMAFLASKNC---IHRDVAARNVLLTNGHVAKIGDFGLARDI----MNDSNYIV 218
Query: 497 TAQGTM--GYLDPEYYRNFQLTDKSDVYSFGVVLLELLT 533
+ ++ PE + T +SDV+S+G++L E+ +
Sbjct: 219 KGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 257
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
Length = 344
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 66/232 (28%), Positives = 112/232 (48%), Gaps = 25/232 (10%)
Query: 309 NAKAAGKSARIFTGKEIRRATNNFSKDNLIGTGGFGEVFKGI-LDDGTVTAIK------R 361
+ KA ARIF E+R K ++G+G FG V KG+ + +G I
Sbjct: 17 SEKANKVLARIFKETELR-------KLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIE 69
Query: 362 AKLGNTKGTDLVLNEVRILCQVNHRSLVRLLGCCVELDQTLMIYEYIPNGTLFDHLHCDF 421
K G + V + + + ++H +VRLLG C L + +Y+P G+L DH+
Sbjct: 70 DKSGR-QSFQAVTDHMLAIGSLDHAHIVRLLGLCPGSSLQL-VTQYLPLGSLLDHVRQHR 127
Query: 422 TGKWPPLPWHLRLVIAHQIAEGLTYLHSAAVPPIYHRDVKSSNILLDEKLNAKVSDFGLS 481
P L L QIA+G+ YL + HR++ + N+LL +V+DFG++
Sbjct: 128 GALGP----QLLLNWGVQIAKGMYYLEEHG---MVHRNLAARNVLLKSPSQVQVADFGVA 180
Query: 482 RLVERTETNDSHIFTTAQGTMGYLDPEYYRNFQLTDKSDVYSFGVVLLELLT 533
L+ + +++ A+ + ++ E + T +SDV+S+GV + EL+T
Sbjct: 181 DLL--PPDDKQLLYSEAKTPIKWMALESIHFGKYTHQSDVWSYGVTVWELMT 230
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 69/225 (30%), Positives = 103/225 (45%), Gaps = 34/225 (15%)
Query: 330 NNFSKDNLIGTGGFGEVFKG-ILDDGTV--TAIKRAKLGNTKGTDL-VLNEVRILCQVNH 385
N+ ++IG G FG+V K I DG AIKR K +K E+ +LC++ H
Sbjct: 22 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGH 81
Query: 386 R-SLVRLLGCCVELDQTLMIYEYIPNGTLFDHLHCDFTGKWPP-----------LPWHLR 433
+++ LLG C + EY P+G L D L + P L
Sbjct: 82 HPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQL 141
Query: 434 LVIAHQIAEGLTYLHSAAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDSH 493
L A +A G+ YL + HR++ + NIL+ E AK++DFGLSR E
Sbjct: 142 LHFAADVARGMDYL---SQKQFIHRNLAARNILVGENYVAKIADFGLSRGQE-------- 190
Query: 494 IFTTAQGTMGYLDPEYYR----NFQL-TDKSDVYSFGVVLLELLT 533
+ TMG L + N+ + T SDV+S+GV+L E+++
Sbjct: 191 --VYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVS 233
>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|B Chain B, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|C Chain C, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|D Chain D, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
Length = 301
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 64/224 (28%), Positives = 108/224 (48%), Gaps = 23/224 (10%)
Query: 324 EIRRATNNFSKDNLIGTGGFGEVF----KGILDDG--TVTAIKRA-KLGNTKGTDLVLNE 376
E+ R S++ +G G FG V+ KG++ D T AIK + + + LNE
Sbjct: 8 EVAREKITMSRE--LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNE 65
Query: 377 VRILCQVNHRSLVRLLGCCVELDQTLMIYEYIPNGTLFDHLHC-----DFTGKWPPLPWH 431
++ + N +VRLLG + TL+I E + G L +L + P
Sbjct: 66 ASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLS 125
Query: 432 LRLVIAHQIAEGLTYLHSAAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVERTETND 491
+ +A +IA+G+ YL++ HRD+ + N ++ E K+ DFG++R + T+
Sbjct: 126 KMIQMAGEIADGMAYLNANK---FVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETD--- 179
Query: 492 SHIFTTAQGTM--GYLDPEYYRNFQLTDKSDVYSFGVVLLELLT 533
+ +G + ++ PE ++ T SDV+SFGVVL E+ T
Sbjct: 180 -YYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 222
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 67/231 (29%), Positives = 114/231 (49%), Gaps = 18/231 (7%)
Query: 330 NNFSKDNLIGTGGFGEVF--KGIL--DDGTVTAIKRAKLGNTKGTDLVLNEVR--ILCQV 383
++F ++G G FG+VF + + D G + A+K K K D V ++ IL V
Sbjct: 28 SHFELLKVLGQGSFGKVFLVRKVTRPDSGHLYAMKVLKKATLKVRDRVRTKMERDILADV 87
Query: 384 NHRSLVRLLGCCVELDQTLMIYEYIPNGTLFDHLHCDFTGKWPPLPWHLRLVIAHQIAEG 443
NH +V+L + +I +++ G LF L + + ++L ++A G
Sbjct: 88 NHPFVVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLA-----ELALG 142
Query: 444 LTYLHSAAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDSHIFTTAQGTMG 503
L +LHS I +RD+K NILLDE+ + K++DFGLS+ E ++ F GT+
Sbjct: 143 LDHLHSLG---IIYRDLKPENILLDEEGHIKLTDFGLSKEAIDHEKK-AYSFC---GTVE 195
Query: 504 YLDPEYYRNFQLTDKSDVYSFGVVLLELLTSKKAIDFNREEENVNLVVYMK 554
Y+ PE + +D +S+GV++ E+LT +E + L++ K
Sbjct: 196 YMAPEVVNRQGHSHSADWWSYGVLMFEMLTGSLPFQGKDRKETMTLILKAK 246
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 65/226 (28%), Positives = 111/226 (49%), Gaps = 29/226 (12%)
Query: 317 ARIFTGKEIRRATNNFSKDNLIGTGGFGEVFKGI-LDDGTVTAIK------RAKLGNTKG 369
ARIF E+R K ++G+G FG V KG+ + +G I K G +
Sbjct: 7 ARIFKETELR-------KLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGR-QS 58
Query: 370 TDLVLNEVRILCQVNHRSLVRLLGCCVELDQTLMIYEYIPNGTLFDHL--HCDFTGKWPP 427
V + + + ++H +VRLLG C L + +Y+P G+L DH+ H G
Sbjct: 59 FQAVTDHMLAIGSLDHAHIVRLLGLCPGSSLQL-VTQYLPLGSLLDHVRQHRGALGPQLL 117
Query: 428 LPWHLRLVIAHQIAEGLTYLHSAAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVERT 487
L W + QIA+G+ YL + HR++ + N+LL +V+DFG++ L+
Sbjct: 118 LNWGV------QIAKGMYYLEEHG---MVHRNLAARNVLLKSPSQVQVADFGVADLL--P 166
Query: 488 ETNDSHIFTTAQGTMGYLDPEYYRNFQLTDKSDVYSFGVVLLELLT 533
+ +++ A+ + ++ E + T +SDV+S+GV + EL+T
Sbjct: 167 PDDKQLLYSEAKTPIKWMALESIHFGKYTHQSDVWSYGVTVWELMT 212
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 65/236 (27%), Positives = 100/236 (42%), Gaps = 24/236 (10%)
Query: 322 GKEIRRATNNFSKDNLIGTGGFGEVF-------KGILDDGTVTAIKRAKLGNTKGTDLVL 374
GK+ + A +F +G G FG V+ K IL + + +A+L +
Sbjct: 1 GKKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFIL---ALKVLFKAQLEKAGVEHQLR 57
Query: 375 NEVRILCQVNHRSLVRLLGCCVELDQTLMIYEYIPNGTLFDHLHCDFTGKWPPLPWHLRL 434
EV I + H +++RL G + + +I EY P GT++ L K
Sbjct: 58 REVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQ-----KLSKFDEQRTA 112
Query: 435 VIAHQIAEGLTYLHSAAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDSHI 494
++A L+Y HS V HRD+K N+LL K++DFG S +
Sbjct: 113 TYITELANALSYCHSKRV---IHRDIKPENLLLGSAGELKIADFGWSCHAPSSRR----- 164
Query: 495 FTTAQGTMGYLDPEYYRNFQLTDKSDVYSFGVVLLELLTSKKAIDFNREEENVNLV 550
TT GT+ YL PE +K D++S GV+ E L K + N +E +
Sbjct: 165 -TTLSGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRI 219
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 101/204 (49%), Gaps = 17/204 (8%)
Query: 338 IGTGGFGEV----FKGILDD-GTVTAIKRAKLGNTKGTDLVLNEVRILCQVNHRSLVRLL 392
+G G FG V + + D+ G V A+K+ + + E+ IL + H ++V+
Sbjct: 21 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 80
Query: 393 GCCVELDQT--LMIYEYIPNGTLFDHLHCDFTGKWPPLPWHLRLV-IAHQIAEGLTYLHS 449
G C + +I EY+P G+L D+L K H++L+ QI +G+ YL +
Sbjct: 81 GVCYSAGRRNLKLIMEYLPYGSLRDYLQ-----KHKERIDHIKLLQYTSQICKGMEYLGT 135
Query: 450 AAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDSHIFTTAQGTMGYLDPEY 509
HRD+ + NIL++ + K+ DFGL++++ + + + + + + PE
Sbjct: 136 KRY---IHRDLATRNILVENENRVKIGDFGLTKVLPQ-DKEXXKVKEPGESPIFWYAPES 191
Query: 510 YRNFQLTDKSDVYSFGVVLLELLT 533
+ + SDV+SFGVVL EL T
Sbjct: 192 LTESKFSVASDVWSFGVVLYELFT 215
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 101/204 (49%), Gaps = 17/204 (8%)
Query: 338 IGTGGFGEV----FKGILDD-GTVTAIKRAKLGNTKGTDLVLNEVRILCQVNHRSLVRLL 392
+G G FG V + + D+ G V A+K+ + + E+ IL + H ++V+
Sbjct: 25 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 84
Query: 393 GCCVELDQT--LMIYEYIPNGTLFDHLHCDFTGKWPPLPWHLRLV-IAHQIAEGLTYLHS 449
G C + +I EY+P G+L D+L K H++L+ QI +G+ YL +
Sbjct: 85 GVCYSAGRRNLKLIMEYLPYGSLRDYLQ-----KHKERIDHIKLLQYTSQICKGMEYLGT 139
Query: 450 AAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDSHIFTTAQGTMGYLDPEY 509
HRD+ + NIL++ + K+ DFGL++++ + + + + + + PE
Sbjct: 140 KRY---IHRDLATRNILVENENRVKIGDFGLTKVLPQ-DKEXXKVKEPGESPIFWYAPES 195
Query: 510 YRNFQLTDKSDVYSFGVVLLELLT 533
+ + SDV+SFGVVL EL T
Sbjct: 196 LTESKFSVASDVWSFGVVLYELFT 219
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 101/204 (49%), Gaps = 17/204 (8%)
Query: 338 IGTGGFGEV----FKGILDD-GTVTAIKRAKLGNTKGTDLVLNEVRILCQVNHRSLVRLL 392
+G G FG V + + D+ G V A+K+ + + E+ IL + H ++V+
Sbjct: 22 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 81
Query: 393 GCCVELDQT--LMIYEYIPNGTLFDHLHCDFTGKWPPLPWHLRLV-IAHQIAEGLTYLHS 449
G C + +I EY+P G+L D+L K H++L+ QI +G+ YL +
Sbjct: 82 GVCYSAGRRNLKLIMEYLPYGSLRDYLQ-----KHKERIDHIKLLQYTSQICKGMEYLGT 136
Query: 450 AAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDSHIFTTAQGTMGYLDPEY 509
HRD+ + NIL++ + K+ DFGL++++ + + + + + + PE
Sbjct: 137 KRY---IHRDLATRNILVENENRVKIGDFGLTKVLPQ-DKEXXKVKEPGESPIFWYAPES 192
Query: 510 YRNFQLTDKSDVYSFGVVLLELLT 533
+ + SDV+SFGVVL EL T
Sbjct: 193 LTESKFSVASDVWSFGVVLYELFT 216
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 101/204 (49%), Gaps = 17/204 (8%)
Query: 338 IGTGGFGEV----FKGILDD-GTVTAIKRAKLGNTKGTDLVLNEVRILCQVNHRSLVRLL 392
+G G FG V + + D+ G V A+K+ + + E+ IL + H ++V+
Sbjct: 49 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 108
Query: 393 GCCVELDQT--LMIYEYIPNGTLFDHLHCDFTGKWPPLPWHLRLV-IAHQIAEGLTYLHS 449
G C + +I EY+P G+L D+L K H++L+ QI +G+ YL +
Sbjct: 109 GVCYSAGRRNLKLIMEYLPYGSLRDYLQ-----KHKERIDHIKLLQYTSQICKGMEYLGT 163
Query: 450 AAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDSHIFTTAQGTMGYLDPEY 509
HRD+ + NIL++ + K+ DFGL++++ + + + + + + PE
Sbjct: 164 KRY---IHRDLATRNILVENENRVKIGDFGLTKVLPQ-DKEXXKVKEPGESPIFWYAPES 219
Query: 510 YRNFQLTDKSDVYSFGVVLLELLT 533
+ + SDV+SFGVVL EL T
Sbjct: 220 LTESKFSVASDVWSFGVVLYELFT 243
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 101/204 (49%), Gaps = 17/204 (8%)
Query: 338 IGTGGFGEV----FKGILDD-GTVTAIKRAKLGNTKGTDLVLNEVRILCQVNHRSLVRLL 392
+G G FG V + + D+ G V A+K+ + + E+ IL + H ++V+
Sbjct: 23 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 82
Query: 393 GCCVELDQT--LMIYEYIPNGTLFDHLHCDFTGKWPPLPWHLRLV-IAHQIAEGLTYLHS 449
G C + +I EY+P G+L D+L K H++L+ QI +G+ YL +
Sbjct: 83 GVCYSAGRRNLKLIMEYLPYGSLRDYLQ-----KHKERIDHIKLLQYTSQICKGMEYLGT 137
Query: 450 AAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDSHIFTTAQGTMGYLDPEY 509
HRD+ + NIL++ + K+ DFGL++++ + + + + + + PE
Sbjct: 138 KRY---IHRDLATRNILVENENRVKIGDFGLTKVLPQ-DKEXXKVKEPGESPIFWYAPES 193
Query: 510 YRNFQLTDKSDVYSFGVVLLELLT 533
+ + SDV+SFGVVL EL T
Sbjct: 194 LTESKFSVASDVWSFGVVLYELFT 217
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 60/207 (28%), Positives = 100/207 (48%), Gaps = 23/207 (11%)
Query: 338 IGTGGFGEV----FKGILDD-GTVTAIKRAKLGNTKGTDLVLNEVRILCQVNHRSLVRLL 392
+G G FG V + + D+ G V A+K+ + + E+ IL + H ++V+
Sbjct: 18 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 77
Query: 393 GCCVELDQT--LMIYEYIPNGTLFDHLHCDFTGKWPPLPWHLRLV-IAHQIAEGLTYLHS 449
G C + +I EY+P G+L D+L K H++L+ QI +G+ YL +
Sbjct: 78 GVCYSAGRRNLKLIMEYLPYGSLRDYLQ-----KHKERIDHIKLLQYTSQICKGMEYLGT 132
Query: 450 AAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDSHIFTT---AQGTMGYLD 506
HRD+ + NIL++ + K+ DFGL++++ D F + + +
Sbjct: 133 KRY---IHRDLATRNILVENENRVKIGDFGLTKVL----PQDKEFFKVKEPGESPIFWYA 185
Query: 507 PEYYRNFQLTDKSDVYSFGVVLLELLT 533
PE + + SDV+SFGVVL EL T
Sbjct: 186 PESLTESKFSVASDVWSFGVVLYELFT 212
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 101/204 (49%), Gaps = 17/204 (8%)
Query: 338 IGTGGFGEV----FKGILDD-GTVTAIKRAKLGNTKGTDLVLNEVRILCQVNHRSLVRLL 392
+G G FG V + + D+ G V A+K+ + + E+ IL + H ++V+
Sbjct: 24 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 83
Query: 393 GCCVELDQT--LMIYEYIPNGTLFDHLHCDFTGKWPPLPWHLRLV-IAHQIAEGLTYLHS 449
G C + +I EY+P G+L D+L K H++L+ QI +G+ YL +
Sbjct: 84 GVCYSAGRRNLKLIMEYLPYGSLRDYLQ-----KHKERIDHIKLLQYTSQICKGMEYLGT 138
Query: 450 AAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDSHIFTTAQGTMGYLDPEY 509
HRD+ + NIL++ + K+ DFGL++++ + + + + + + PE
Sbjct: 139 KRY---IHRDLATRNILVENENRVKIGDFGLTKVLPQ-DKEXXKVKEPGESPIFWYAPES 194
Query: 510 YRNFQLTDKSDVYSFGVVLLELLT 533
+ + SDV+SFGVVL EL T
Sbjct: 195 LTESKFSVASDVWSFGVVLYELFT 218
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 101/204 (49%), Gaps = 17/204 (8%)
Query: 338 IGTGGFGEV----FKGILDD-GTVTAIKRAKLGNTKGTDLVLNEVRILCQVNHRSLVRLL 392
+G G FG V + + D+ G V A+K+ + + E+ IL + H ++V+
Sbjct: 17 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 76
Query: 393 GCCVELDQT--LMIYEYIPNGTLFDHLHCDFTGKWPPLPWHLRLV-IAHQIAEGLTYLHS 449
G C + +I EY+P G+L D+L K H++L+ QI +G+ YL +
Sbjct: 77 GVCYSAGRRNLKLIMEYLPYGSLRDYLQ-----KHKERIDHIKLLQYTSQICKGMEYLGT 131
Query: 450 AAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDSHIFTTAQGTMGYLDPEY 509
HRD+ + NIL++ + K+ DFGL++++ + + + + + + PE
Sbjct: 132 KRY---IHRDLATRNILVENENRVKIGDFGLTKVLPQ-DKEXXKVKEPGESPIFWYAPES 187
Query: 510 YRNFQLTDKSDVYSFGVVLLELLT 533
+ + SDV+SFGVVL EL T
Sbjct: 188 LTESKFSVASDVWSFGVVLYELFT 211
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 101/204 (49%), Gaps = 17/204 (8%)
Query: 338 IGTGGFGEV----FKGILDD-GTVTAIKRAKLGNTKGTDLVLNEVRILCQVNHRSLVRLL 392
+G G FG V + + D+ G V A+K+ + + E+ IL + H ++V+
Sbjct: 16 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 75
Query: 393 GCCVELDQT--LMIYEYIPNGTLFDHLHCDFTGKWPPLPWHLRLV-IAHQIAEGLTYLHS 449
G C + +I EY+P G+L D+L K H++L+ QI +G+ YL +
Sbjct: 76 GVCYSAGRRNLKLIMEYLPYGSLRDYLQ-----KHKERIDHIKLLQYTSQICKGMEYLGT 130
Query: 450 AAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDSHIFTTAQGTMGYLDPEY 509
HRD+ + NIL++ + K+ DFGL++++ + + + + + + PE
Sbjct: 131 KRY---IHRDLATRNILVENENRVKIGDFGLTKVLPQ-DKEXXKVKEPGESPIFWYAPES 186
Query: 510 YRNFQLTDKSDVYSFGVVLLELLT 533
+ + SDV+SFGVVL EL T
Sbjct: 187 LTESKFSVASDVWSFGVVLYELFT 210
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 101/204 (49%), Gaps = 17/204 (8%)
Query: 338 IGTGGFGEV----FKGILDD-GTVTAIKRAKLGNTKGTDLVLNEVRILCQVNHRSLVRLL 392
+G G FG V + + D+ G V A+K+ + + E+ IL + H ++V+
Sbjct: 18 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 77
Query: 393 GCCVELDQT--LMIYEYIPNGTLFDHLHCDFTGKWPPLPWHLRLV-IAHQIAEGLTYLHS 449
G C + +I EY+P G+L D+L K H++L+ QI +G+ YL +
Sbjct: 78 GVCYSAGRRNLKLIMEYLPYGSLRDYLQ-----KHKERIDHIKLLQYTSQICKGMEYLGT 132
Query: 450 AAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDSHIFTTAQGTMGYLDPEY 509
HRD+ + NIL++ + K+ DFGL++++ + + + + + + PE
Sbjct: 133 KRY---IHRDLATRNILVENENRVKIGDFGLTKVLPQ-DKEXXKVKEPGESPIFWYAPES 188
Query: 510 YRNFQLTDKSDVYSFGVVLLELLT 533
+ + SDV+SFGVVL EL T
Sbjct: 189 LTESKFSVASDVWSFGVVLYELFT 212
>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1
Receptor Kinase In Complex With Pqip
Length = 301
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 63/229 (27%), Positives = 106/229 (46%), Gaps = 21/229 (9%)
Query: 319 IFTGKEIRRATNNFSKDNLIGTGGFGEVF----KGILDD--GTVTAIKRA-KLGNTKGTD 371
++ E A + +G G FG V+ KG++ D T AIK + + +
Sbjct: 1 VYVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERI 60
Query: 372 LVLNEVRILCQVNHRSLVRLLGCCVELDQTLMIYEYIPNGTLFDHLHC-----DFTGKWP 426
LNE ++ + N +VRLLG + TL+I E + G L +L +
Sbjct: 61 EFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLA 120
Query: 427 PLPWHLRLVIAHQIAEGLTYLHSAAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVER 486
P + +A +IA+G+ YL++ HRD+ + N + E K+ DFG++R +
Sbjct: 121 PPSLSKMIQMAGEIADGMAYLNANK---FVHRDLAARNCXVAEDFTVKIGDFGMTRDIYE 177
Query: 487 TETNDSHIFTTAQGTM--GYLDPEYYRNFQLTDKSDVYSFGVVLLELLT 533
T+ + +G + ++ PE ++ T SDV+SFGVVL E+ T
Sbjct: 178 TD----YYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 222
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 101/204 (49%), Gaps = 17/204 (8%)
Query: 338 IGTGGFGEV----FKGILDD-GTVTAIKRAKLGNTKGTDLVLNEVRILCQVNHRSLVRLL 392
+G G FG V + + D+ G V A+K+ + + E+ IL + H ++V+
Sbjct: 18 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 77
Query: 393 GCCVELDQT--LMIYEYIPNGTLFDHLHCDFTGKWPPLPWHLRLV-IAHQIAEGLTYLHS 449
G C + +I EY+P G+L D+L K H++L+ QI +G+ YL +
Sbjct: 78 GVCYSAGRRNLKLIMEYLPYGSLRDYLQ-----KHKERIDHIKLLQYTSQICKGMEYLGT 132
Query: 450 AAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDSHIFTTAQGTMGYLDPEY 509
HRD+ + NIL++ + K+ DFGL++++ + + + + + + PE
Sbjct: 133 KRY---IHRDLATRNILVENENRVKIGDFGLTKVLPQ-DKEXXKVKEPGESPIFWYAPES 188
Query: 510 YRNFQLTDKSDVYSFGVVLLELLT 533
+ + SDV+SFGVVL EL T
Sbjct: 189 LTESKFSVASDVWSFGVVLYELFT 212
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 100/204 (49%), Gaps = 17/204 (8%)
Query: 338 IGTGGFGEV----FKGILDD-GTVTAIKRAKLGNTKGTDLVLNEVRILCQVNHRSLVRLL 392
+G G FG V + + D+ G V A+K+ + + E+ IL + H ++V+
Sbjct: 36 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 95
Query: 393 GCCVELDQT--LMIYEYIPNGTLFDHLHCDFTGKWPPLPWHLRLV-IAHQIAEGLTYLHS 449
G C + +I EY+P G+L D+L K H++L+ QI +G+ YL
Sbjct: 96 GVCYSAGRRNLKLIMEYLPYGSLRDYLQ-----KHKERIDHIKLLQYTSQICKGMEYL-- 148
Query: 450 AAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDSHIFTTAQGTMGYLDPEY 509
HRD+ + NIL++ + K+ DFGL++++ + + + + + + PE
Sbjct: 149 -GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQ-DKEXXKVKEPGESPIFWYAPES 206
Query: 510 YRNFQLTDKSDVYSFGVVLLELLT 533
+ + SDV+SFGVVL EL T
Sbjct: 207 LTESKFSVASDVWSFGVVLYELFT 230
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 64/204 (31%), Positives = 95/204 (46%), Gaps = 22/204 (10%)
Query: 337 LIGTGGFGEVFK----GILDDGTVTAIKRAKLGNTKGTDLVLNEVRILCQVNHRSLVRLL 392
++G G FGEV K + V I +A N K T +L EV +L +++H ++++L
Sbjct: 29 MLGKGSFGEVLKCKDRITQQEYAVKVINKASAKN-KDTSTILREVELLKKLDHPNIMKLF 87
Query: 393 GCCVELDQTLMIYEYIPNGTLFDHLHCDFTGKWPPLPWHLRLVIAHQIAEGLTYLHSAAV 452
+ ++ E G LFD + K H I Q+ G+TY+H
Sbjct: 88 EILEDSSSFYIVGELYTGGELFDEII-----KRKRFSEHDAARIIKQVFSGITYMHK--- 139
Query: 453 PPIYHRDVKSSNILLDEK---LNAKVSDFGLSRLVERTETNDSHIFTTAQGTMGYLDPEY 509
I HRD+K NILL+ K + K+ DFGLS ++ I GT Y+ PE
Sbjct: 140 HNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRI-----GTAYYIAPEV 194
Query: 510 YRNFQLTDKSDVYSFGVVLLELLT 533
R +K DV+S GV+L LL+
Sbjct: 195 LRG-TYDEKCDVWSAGVILYILLS 217
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 101/204 (49%), Gaps = 17/204 (8%)
Query: 338 IGTGGFGEV----FKGILDD-GTVTAIKRAKLGNTKGTDLVLNEVRILCQVNHRSLVRLL 392
+G G FG V + + D+ G V A+K+ + + E+ IL + H ++V+
Sbjct: 36 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 95
Query: 393 GCCVELDQT--LMIYEYIPNGTLFDHLHCDFTGKWPPLPWHLRLV-IAHQIAEGLTYLHS 449
G C + +I EY+P G+L D+L K H++L+ QI +G+ YL +
Sbjct: 96 GVCYSAGRRNLKLIMEYLPYGSLRDYLQ-----KHKERIDHIKLLQYTSQICKGMEYLGT 150
Query: 450 AAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDSHIFTTAQGTMGYLDPEY 509
HRD+ + NIL++ + K+ DFGL++++ + + + + + + PE
Sbjct: 151 KRY---IHRDLATRNILVENENRVKIGDFGLTKVLPQ-DKEXXKVKEPGESPIFWYAPES 206
Query: 510 YRNFQLTDKSDVYSFGVVLLELLT 533
+ + SDV+SFGVVL EL T
Sbjct: 207 LTESKFSVASDVWSFGVVLYELFT 230
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 64/204 (31%), Positives = 95/204 (46%), Gaps = 22/204 (10%)
Query: 337 LIGTGGFGEVFKG----ILDDGTVTAIKRAKLGNTKGTDLVLNEVRILCQVNHRSLVRLL 392
++G G FGEV K + V I +A N K T +L EV +L +++H ++++L
Sbjct: 29 MLGKGSFGEVLKCKDRITQQEYAVKVINKASAKN-KDTSTILREVELLKKLDHPNIMKLF 87
Query: 393 GCCVELDQTLMIYEYIPNGTLFDHLHCDFTGKWPPLPWHLRLVIAHQIAEGLTYLHSAAV 452
+ ++ E G LFD + K H I Q+ G+TY+H
Sbjct: 88 EILEDSSSFYIVGELYTGGELFDEI-----IKRKRFSEHDAARIIKQVFSGITYMHKHN- 141
Query: 453 PPIYHRDVKSSNILLDEK---LNAKVSDFGLSRLVERTETNDSHIFTTAQGTMGYLDPEY 509
I HRD+K NILL+ K + K+ DFGLS ++ I GT Y+ PE
Sbjct: 142 --IVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRI-----GTAYYIAPEV 194
Query: 510 YRNFQLTDKSDVYSFGVVLLELLT 533
R +K DV+S GV+L LL+
Sbjct: 195 LRG-TYDEKCDVWSAGVILYILLS 217
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 64/204 (31%), Positives = 95/204 (46%), Gaps = 22/204 (10%)
Query: 337 LIGTGGFGEVFKG----ILDDGTVTAIKRAKLGNTKGTDLVLNEVRILCQVNHRSLVRLL 392
++G G FGEV K + V I +A N K T +L EV +L +++H ++++L
Sbjct: 29 MLGKGSFGEVLKCKDRITQQEYAVKVINKASAKN-KDTSTILREVELLKKLDHPNIMKLF 87
Query: 393 GCCVELDQTLMIYEYIPNGTLFDHLHCDFTGKWPPLPWHLRLVIAHQIAEGLTYLHSAAV 452
+ ++ E G LFD + K H I Q+ G+TY+H
Sbjct: 88 EILEDSSSFYIVGELYTGGELFDEI-----IKRKRFSEHDAARIIKQVFSGITYMHKHN- 141
Query: 453 PPIYHRDVKSSNILLDEK---LNAKVSDFGLSRLVERTETNDSHIFTTAQGTMGYLDPEY 509
I HRD+K NILL+ K + K+ DFGLS ++ I GT Y+ PE
Sbjct: 142 --IVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRI-----GTAYYIAPEV 194
Query: 510 YRNFQLTDKSDVYSFGVVLLELLT 533
R +K DV+S GV+L LL+
Sbjct: 195 LRG-TYDEKCDVWSAGVILYILLS 217
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 66/231 (28%), Positives = 113/231 (48%), Gaps = 18/231 (7%)
Query: 330 NNFSKDNLIGTGGFGEVF--KGIL--DDGTVTAIKRAKLGNTKGTDLVLNEVR--ILCQV 383
+ F ++G G FG+VF K I D + A+K K K D V ++ IL +V
Sbjct: 24 SQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEV 83
Query: 384 NHRSLVRLLGCCVELDQTLMIYEYIPNGTLFDHLHCDFTGKWPPLPWHLRLVIAHQIAEG 443
NH +V+L + +I +++ G LF L + + ++L ++A
Sbjct: 84 NHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLA-----ELALA 138
Query: 444 LTYLHSAAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDSHIFTTAQGTMG 503
L +LHS I +RD+K NILLDE+ + K++DFGLS+ + ++ ++ GT+
Sbjct: 139 LDHLHSLG---IIYRDLKPENILLDEEGHIKLTDFGLSK---ESIDHEKKAYSFC-GTVE 191
Query: 504 YLDPEYYRNFQLTDKSDVYSFGVVLLELLTSKKAIDFNREEENVNLVVYMK 554
Y+ PE T +D +SFGV++ E+LT +E + +++ K
Sbjct: 192 YMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDRKETMTMILKAK 242
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 102/206 (49%), Gaps = 21/206 (10%)
Query: 338 IGTGGFGEV----FKGILDD-GTVTAIKRAKLGNTKGTDLVLNEVRILCQVNHRSLVRLL 392
+G G FG V + + D+ G V A+K+ + + E+ IL + H ++V+
Sbjct: 21 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 80
Query: 393 GCCVELDQT--LMIYEYIPNGTLFDHL--HCDFTGKWPPLPWHLRLV-IAHQIAEGLTYL 447
G C + +I EY+P G+L D+L H + H++L+ QI +G+ YL
Sbjct: 81 GVCYSAGRRNLKLIMEYLPYGSLRDYLQAHAERID-------HIKLLQYTSQICKGMEYL 133
Query: 448 HSAAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDSHIFTTAQGTMGYLDP 507
+ HRD+ + NIL++ + K+ DFGL++++ + + + + + + P
Sbjct: 134 GTKRY---IHRDLATRNILVENENRVKIGDFGLTKVLPQ-DKEXXKVKEPGESPIFWYAP 189
Query: 508 EYYRNFQLTDKSDVYSFGVVLLELLT 533
E + + SDV+SFGVVL EL T
Sbjct: 190 ESLTESKFSVASDVWSFGVVLYELFT 215
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 76.3 bits (186), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 66/231 (28%), Positives = 113/231 (48%), Gaps = 18/231 (7%)
Query: 330 NNFSKDNLIGTGGFGEVF--KGIL--DDGTVTAIKRAKLGNTKGTDLVLNEVR--ILCQV 383
+ F ++G G FG+VF K I D + A+K K K D V ++ IL +V
Sbjct: 24 SQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEV 83
Query: 384 NHRSLVRLLGCCVELDQTLMIYEYIPNGTLFDHLHCDFTGKWPPLPWHLRLVIAHQIAEG 443
NH +V+L + +I +++ G LF L + + ++L ++A
Sbjct: 84 NHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLA-----ELALA 138
Query: 444 LTYLHSAAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDSHIFTTAQGTMG 503
L +LHS I +RD+K NILLDE+ + K++DFGLS+ + ++ ++ GT+
Sbjct: 139 LDHLHSLG---IIYRDLKPENILLDEEGHIKLTDFGLSK---ESIDHEKKAYSFC-GTVE 191
Query: 504 YLDPEYYRNFQLTDKSDVYSFGVVLLELLTSKKAIDFNREEENVNLVVYMK 554
Y+ PE T +D +SFGV++ E+LT +E + +++ K
Sbjct: 192 YMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDRKETMTMILKAK 242
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 66/231 (28%), Positives = 113/231 (48%), Gaps = 18/231 (7%)
Query: 330 NNFSKDNLIGTGGFGEVF--KGIL--DDGTVTAIKRAKLGNTKGTDLVLNEVR--ILCQV 383
+ F ++G G FG+VF K I D + A+K K K D V ++ IL +V
Sbjct: 25 SQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEV 84
Query: 384 NHRSLVRLLGCCVELDQTLMIYEYIPNGTLFDHLHCDFTGKWPPLPWHLRLVIAHQIAEG 443
NH +V+L + +I +++ G LF L + + ++L ++A
Sbjct: 85 NHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLA-----ELALA 139
Query: 444 LTYLHSAAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDSHIFTTAQGTMG 503
L +LHS I +RD+K NILLDE+ + K++DFGLS+ + ++ ++ GT+
Sbjct: 140 LDHLHSLG---IIYRDLKPENILLDEEGHIKLTDFGLSK---ESIDHEKKAYSFC-GTVE 192
Query: 504 YLDPEYYRNFQLTDKSDVYSFGVVLLELLTSKKAIDFNREEENVNLVVYMK 554
Y+ PE T +D +SFGV++ E+LT +E + +++ K
Sbjct: 193 YMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDRKETMTMILKAK 243
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 67/207 (32%), Positives = 99/207 (47%), Gaps = 21/207 (10%)
Query: 330 NNFSKDNLIGTGGFGEV-FKGILDDGTVTAIK---RAKLGNTKGTDLVLNEVRILCQVNH 385
+ F + IGTG FG V ++ G A+K + K+ K + LNE RIL VN
Sbjct: 41 DQFERIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 386 RSLVRLLGCCVELDQTLMIYEYIPNGTLFDHLHCDFTGKWPPLPWHLRLVIAHQIAEGLT 445
LV+L + M+ EY+P G +F HL G++ P H R A QI
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRR--IGRFSE-P-HARFYAA-QIVLTFE 155
Query: 446 YLHSAAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVE-RTETNDSHIFTTAQGTMGY 504
YLHS + +RD+K N+L+D++ KV+DFG ++ V+ RT GT Y
Sbjct: 156 YLHSL---DLIYRDLKPENLLIDQQGYIKVADFGFAKRVKGRT--------WXLCGTPEY 204
Query: 505 LDPEYYRNFQLTDKSDVYSFGVVLLEL 531
L PE + D ++ GV++ E+
Sbjct: 205 LAPEIILSKGYNKAVDWWALGVLIYEM 231
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 75.5 bits (184), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 67/250 (26%), Positives = 105/250 (42%), Gaps = 23/250 (9%)
Query: 305 EEMLNAKAAGKSARIFTGKEIRRATNNFSKDNLIGTGGFGEVFKGILDDGT-VTAIK--- 360
EE L +K + + K+ + A +F +G G FG V+ + A+K
Sbjct: 14 EEELASKQKNEES-----KKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLF 68
Query: 361 RAKLGNTKGTDLVLNEVRILCQVNHRSLVRLLGCCVELDQTLMIYEYIPNGTLFDHLHCD 420
+A+L + EV I + H +++RL G + + +I EY P GT++ L
Sbjct: 69 KAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQ-- 126
Query: 421 FTGKWPPLPWHLRLVIAHQIAEGLTYLHSAAVPPIYHRDVKSSNILLDEKLNAKVSDFGL 480
K ++A L+Y HS V HRD+K N+LL K++DFG
Sbjct: 127 ---KLSKFDEQRTATYITELANALSYCHSKRV---IHRDIKPENLLLGSAGELKIADFGW 180
Query: 481 SRLVERTETNDSHIFTTAQGTMGYLDPEYYRNFQLTDKSDVYSFGVVLLELLTSKKAIDF 540
S + TT GT+ YL PE +K D++S GV+ E L K +
Sbjct: 181 SVHAPSSRR------TTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEA 234
Query: 541 NREEENVNLV 550
N +E +
Sbjct: 235 NTYQETYKRI 244
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 75.5 bits (184), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 66/207 (31%), Positives = 100/207 (48%), Gaps = 21/207 (10%)
Query: 330 NNFSKDNLIGTGGFGEV-FKGILDDGTVTAIK---RAKLGNTKGTDLVLNEVRILCQVNH 385
+ F + +GTG FG V ++ G A+K + K+ K + LNE RIL VN
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 101
Query: 386 RSLVRLLGCCVELDQTLMIYEYIPNGTLFDHLHCDFTGKWPPLPWHLRLVIAHQIAEGLT 445
LV+L + M+ EY+P G +F HL G++ P H R A QI
Sbjct: 102 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRR--IGRFSE-P-HARFYAA-QIVLTFE 156
Query: 446 YLHSAAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVE-RTETNDSHIFTTAQGTMGY 504
YLHS + +RD+K N+L+D++ +V+DFG ++ V+ RT T GT Y
Sbjct: 157 YLHSL---DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT--------WTLCGTPEY 205
Query: 505 LDPEYYRNFQLTDKSDVYSFGVVLLEL 531
L PE + D ++ GV++ E+
Sbjct: 206 LAPEIILSKGYNKAVDWWALGVLIYEM 232
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 75.5 bits (184), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 66/207 (31%), Positives = 100/207 (48%), Gaps = 21/207 (10%)
Query: 330 NNFSKDNLIGTGGFGEV-FKGILDDGTVTAIK---RAKLGNTKGTDLVLNEVRILCQVNH 385
+ F + +GTG FG V ++ G A+K + K+ K + LNE RIL VN
Sbjct: 27 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 86
Query: 386 RSLVRLLGCCVELDQTLMIYEYIPNGTLFDHLHCDFTGKWPPLPWHLRLVIAHQIAEGLT 445
LV+L + M+ EY+P G +F HL G++ P H R A QI
Sbjct: 87 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRR--IGRFSE-P-HARFYAA-QIVLTFE 141
Query: 446 YLHSAAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVE-RTETNDSHIFTTAQGTMGY 504
YLHS + +RD+K N+L+D++ +V+DFG ++ V+ RT T GT Y
Sbjct: 142 YLHSL---DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT--------WTLCGTPEY 190
Query: 505 LDPEYYRNFQLTDKSDVYSFGVVLLEL 531
L PE + D ++ GV++ E+
Sbjct: 191 LAPEIILSKGYNKAVDWWALGVLIYEM 217
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 64/232 (27%), Positives = 104/232 (44%), Gaps = 35/232 (15%)
Query: 330 NNFSKDNLIGTGGFGEVFK----GILDDGTVTAIKRAKLGNTKGTD---LVLNEVRILCQ 382
NN +G G FG+V + G+ + V + L +T D +++E++I+
Sbjct: 31 NNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSH 90
Query: 383 V-NHRSLVRLLGCCVELDQTLMIYEYIPNGTLFDHLHCDFTGKWPP-------------- 427
+ H ++V LLG C L+I EY G L + L P
Sbjct: 91 LGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEAMLGPSLAPGQDPEGLDKE 150
Query: 428 --LPWHLR--LVIAHQIAEGLTYLHSAAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRL 483
P LR L + Q+A+G+ +L S HRDV + N+LL AK+ DFGL+R
Sbjct: 151 DGRPLELRDLLHFSSQVAQGMAFLASKNC---IHRDVAARNVLLTNGHVAKIGDFGLARD 207
Query: 484 VERTETNDSHIFTTAQGTM--GYLDPEYYRNFQLTDKSDVYSFGVVLLELLT 533
+ NDS+ + ++ PE + T +SDV+S+G++L E+ +
Sbjct: 208 I----MNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 255
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 67/207 (32%), Positives = 99/207 (47%), Gaps = 21/207 (10%)
Query: 330 NNFSKDNLIGTGGFGEV-FKGILDDGTVTAIK---RAKLGNTKGTDLVLNEVRILCQVNH 385
+ F + IGTG FG V ++ G A+K + K+ K + LNE RIL VN
Sbjct: 41 DQFERIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 386 RSLVRLLGCCVELDQTLMIYEYIPNGTLFDHLHCDFTGKWPPLPWHLRLVIAHQIAEGLT 445
LV+L + M+ EY+P G +F HL G++ P H R A QI
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYMPGGDMFSHLRR--IGRFSE-P-HARFYAA-QIVLTFE 155
Query: 446 YLHSAAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVE-RTETNDSHIFTTAQGTMGY 504
YLHS + +RD+K N+L+D++ KV+DFG ++ V+ RT GT Y
Sbjct: 156 YLHSL---DLIYRDLKPENLLIDQQGYIKVADFGFAKRVKGRT--------WXLCGTPEY 204
Query: 505 LDPEYYRNFQLTDKSDVYSFGVVLLEL 531
L PE + D ++ GV++ E+
Sbjct: 205 LAPEIILSKGYNKAVDWWALGVLIYEM 231
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 67/207 (32%), Positives = 99/207 (47%), Gaps = 21/207 (10%)
Query: 330 NNFSKDNLIGTGGFGEV-FKGILDDGTVTAIK---RAKLGNTKGTDLVLNEVRILCQVNH 385
+ F + IGTG FG V ++ G A+K + K+ K + LNE RIL VN
Sbjct: 41 DQFERIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 386 RSLVRLLGCCVELDQTLMIYEYIPNGTLFDHLHCDFTGKWPPLPWHLRLVIAHQIAEGLT 445
LV+L + M+ EY+P G +F HL G++ P H R A QI
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYMPGGDMFSHLRR--IGRFSE-P-HARFYAA-QIVLTFE 155
Query: 446 YLHSAAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVE-RTETNDSHIFTTAQGTMGY 504
YLHS + +RD+K N+L+D++ KV+DFG ++ V+ RT GT Y
Sbjct: 156 YLHSL---DLIYRDLKPENLLIDQQGYIKVADFGFAKRVKGRT--------WXLCGTPEY 204
Query: 505 LDPEYYRNFQLTDKSDVYSFGVVLLEL 531
L PE + D ++ GV++ E+
Sbjct: 205 LAPEIILSKGYNKAVDWWALGVLIYEM 231
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 67/236 (28%), Positives = 111/236 (47%), Gaps = 17/236 (7%)
Query: 330 NNFSKDNLIGTGGFGEVFK-GILDDGTVTA---IKRAKLGNTKGTDLVLNEVRILCQVNH 385
N F + ++G GGFGEV + G + A +++ ++ KG + LNE +IL +VN
Sbjct: 184 NTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNS 243
Query: 386 RSLVRLLGCCVELDQTLMIYEYIPNGTLFDHL-HCDFTGKWPPLPWHLRLVIAHQIAEGL 444
R +V L D ++ + G L H+ H G P + A +I GL
Sbjct: 244 RFVVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMGQAG----FPEARAVFYAAEICCGL 299
Query: 445 TYLHSAAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDSHIFTTAQGTMGY 504
LH I +RD+K NILLD+ + ++SD GL+ V +T + GT+GY
Sbjct: 300 EDLHRER---IVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQTIKGRV-----GTVGY 351
Query: 505 LDPEYYRNFQLTDKSDVYSFGVVLLELLTSKKAIDFNREEENVNLVVYMKKIMDEE 560
+ PE +N + T D ++ G +L E++ + +++ V + K + EE
Sbjct: 352 MAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVERLVKEVPEE 407
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 67/236 (28%), Positives = 111/236 (47%), Gaps = 17/236 (7%)
Query: 330 NNFSKDNLIGTGGFGEVFK-GILDDGTVTA---IKRAKLGNTKGTDLVLNEVRILCQVNH 385
N F + ++G GGFGEV + G + A +++ ++ KG + LNE +IL +VN
Sbjct: 184 NTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNS 243
Query: 386 RSLVRLLGCCVELDQTLMIYEYIPNGTLFDHL-HCDFTGKWPPLPWHLRLVIAHQIAEGL 444
R +V L D ++ + G L H+ H G P + A +I GL
Sbjct: 244 RFVVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMGQAG----FPEARAVFYAAEICCGL 299
Query: 445 TYLHSAAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDSHIFTTAQGTMGY 504
LH I +RD+K NILLD+ + ++SD GL+ V +T + GT+GY
Sbjct: 300 EDLHRER---IVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQTIKGRV-----GTVGY 351
Query: 505 LDPEYYRNFQLTDKSDVYSFGVVLLELLTSKKAIDFNREEENVNLVVYMKKIMDEE 560
+ PE +N + T D ++ G +L E++ + +++ V + K + EE
Sbjct: 352 MAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVERLVKEVPEE 407
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 48/161 (29%), Positives = 82/161 (50%), Gaps = 13/161 (8%)
Query: 376 EVRILCQVNHRSLVRLLGCCVELDQTLMIYEYIPNGTLFDHLHCDFTGKWPPLPWHLRLV 435
EV Q++H+++V ++ E D ++ EYI TL +++ PL +
Sbjct: 61 EVHNSSQLSHQNIVSMIDVDEEDDCYYLVMEYIEGPTLSEYIES-----HGPLSVDTAIN 115
Query: 436 IAHQIAEGLTYLHSAAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSR-LVERTETNDSHI 494
+QI +G+ + H I HRD+K NIL+D K+ DFG+++ L E + T +H+
Sbjct: 116 FTNQILDGIKHAHDMR---IVHRDIKPQNILIDSNKTLKIFDFGIAKALSETSLTQTNHV 172
Query: 495 FTTAQGTMGYLDPEYYRNFQLTDKSDVYSFGVVLLELLTSK 535
GT+ Y PE + + +D+YS G+VL E+L +
Sbjct: 173 L----GTVQYFSPEQAKGEATDECTDIYSIGIVLYEMLVGE 209
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/227 (25%), Positives = 111/227 (48%), Gaps = 12/227 (5%)
Query: 328 ATNNFSKDNLIGTGGFGEVFKGI-LDDGTVTAIKRAKLGNTKGT-DLVLNEVRILCQVNH 385
+++ F + +G G + V+KG+ G A+K KL + +GT + E+ ++ ++ H
Sbjct: 3 SSSQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELKH 62
Query: 386 RSLVRLLGCCVELDQTLMIYEYIPNGTLFDHLHCDFTGKWP-PLPWHLRLVIAHQIAEGL 444
++VRL ++ +++E++ N L ++ G P L +L Q+ +GL
Sbjct: 63 ENIVRLYDVIHTENKLTLVFEFMDN-DLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGL 121
Query: 445 TYLHSAAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDSHIFTTAQGTMGY 504
+ H I HRD+K N+L++++ K+ DFGL+R + F++ T+ Y
Sbjct: 122 AFCHENK---ILHRDLKPQNLLINKRGQLKLGDFGLARAFGIP----VNTFSSEVVTLWY 174
Query: 505 LDPEYYRNFQLTDKS-DVYSFGVVLLELLTSKKAIDFNREEENVNLV 550
P+ + S D++S G +L E++T K +EE + L+
Sbjct: 175 RAPDVLMGSRTYSTSIDIWSCGCILAEMITGKPLFPGTNDEEQLKLI 221
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/230 (27%), Positives = 96/230 (41%), Gaps = 24/230 (10%)
Query: 328 ATNNFSKDNLIGTGGFGEVF-------KGILDDGTVTAIKRAKLGNTKGTDLVLNEVRIL 380
A +F +G G FG V+ K IL + + +A+L + EV I
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFIL---ALKVLFKAQLEKAGVEHQLRREVEIQ 62
Query: 381 CQVNHRSLVRLLGCCVELDQTLMIYEYIPNGTLFDHLHCDFTGKWPPLPWHLRLVIAHQI 440
+ H +++RL G + + +I EY P GT++ L K ++
Sbjct: 63 SHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQ-----KLSKFDEQRTATYITEL 117
Query: 441 AEGLTYLHSAAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDSHIFTTAQG 500
A L+Y HS V HRD+K N+LL K++DFG S + TT G
Sbjct: 118 ANALSYCHSKRV---IHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR------TTLCG 168
Query: 501 TMGYLDPEYYRNFQLTDKSDVYSFGVVLLELLTSKKAIDFNREEENVNLV 550
T+ YL PE +K D++S GV+ E L K + N +E +
Sbjct: 169 TLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRI 218
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 66/250 (26%), Positives = 105/250 (42%), Gaps = 23/250 (9%)
Query: 305 EEMLNAKAAGKSARIFTGKEIRRATNNFSKDNLIGTGGFGEVFKGILDDGT-VTAIK--- 360
EE L +K + + K+ + A +F +G G FG V+ + A+K
Sbjct: 14 EEELASKQKNEES-----KKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLF 68
Query: 361 RAKLGNTKGTDLVLNEVRILCQVNHRSLVRLLGCCVELDQTLMIYEYIPNGTLFDHLHCD 420
+A+L + EV I + H +++RL G + + +I EY P GT++ L
Sbjct: 69 KAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQ-- 126
Query: 421 FTGKWPPLPWHLRLVIAHQIAEGLTYLHSAAVPPIYHRDVKSSNILLDEKLNAKVSDFGL 480
K ++A L+Y HS V HRD+K N+LL K++DFG
Sbjct: 127 ---KLSKFDEQRTATYITELANALSYCHSKRV---IHRDIKPENLLLGSAGELKIADFGW 180
Query: 481 SRLVERTETNDSHIFTTAQGTMGYLDPEYYRNFQLTDKSDVYSFGVVLLELLTSKKAIDF 540
S + +D GT+ YL PE +K D++S GV+ E L K +
Sbjct: 181 SVHAPSSRRDD------LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEA 234
Query: 541 NREEENVNLV 550
N +E +
Sbjct: 235 NTYQETYKRI 244
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 67/250 (26%), Positives = 105/250 (42%), Gaps = 23/250 (9%)
Query: 305 EEMLNAKAAGKSARIFTGKEIRRATNNFSKDNLIGTGGFGEVFKGILDDGT-VTAIK--- 360
EE L +K + + K+ + A +F +G G FG V+ + A+K
Sbjct: 5 EEELASKQKNEES-----KKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLF 59
Query: 361 RAKLGNTKGTDLVLNEVRILCQVNHRSLVRLLGCCVELDQTLMIYEYIPNGTLFDHLHCD 420
+A+L + EV I + H +++RL G + + +I EY P GT++ L
Sbjct: 60 KAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQ-- 117
Query: 421 FTGKWPPLPWHLRLVIAHQIAEGLTYLHSAAVPPIYHRDVKSSNILLDEKLNAKVSDFGL 480
K ++A L+Y HS V HRD+K N+LL K++DFG
Sbjct: 118 ---KLSKFDEQRTATYITELANALSYCHSKRV---IHRDIKPENLLLGSAGELKIADFGW 171
Query: 481 SRLVERTETNDSHIFTTAQGTMGYLDPEYYRNFQLTDKSDVYSFGVVLLELLTSKKAIDF 540
S + TT GT+ YL PE +K D++S GV+ E L K +
Sbjct: 172 SVHAPSSRR------TTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEA 225
Query: 541 NREEENVNLV 550
N +E +
Sbjct: 226 NTYQETYKRI 235
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 64/236 (27%), Positives = 99/236 (41%), Gaps = 24/236 (10%)
Query: 322 GKEIRRATNNFSKDNLIGTGGFGEVF-------KGILDDGTVTAIKRAKLGNTKGTDLVL 374
G + + A +F +G G FG V+ K IL + + +A+L +
Sbjct: 4 GSKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFIL---ALKVLFKAQLEKAGVEHQLR 60
Query: 375 NEVRILCQVNHRSLVRLLGCCVELDQTLMIYEYIPNGTLFDHLHCDFTGKWPPLPWHLRL 434
EV I + H +++RL G + + +I EY P GT++ L K
Sbjct: 61 REVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQ-----KLSKFDEQRTA 115
Query: 435 VIAHQIAEGLTYLHSAAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDSHI 494
++A L+Y HS V HRD+K N+LL K++DFG S +
Sbjct: 116 TYITELANALSYCHSKRV---IHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----- 167
Query: 495 FTTAQGTMGYLDPEYYRNFQLTDKSDVYSFGVVLLELLTSKKAIDFNREEENVNLV 550
TT GT+ YL PE +K D++S GV+ E L K + N +E +
Sbjct: 168 -TTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRI 222
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 64/236 (27%), Positives = 99/236 (41%), Gaps = 24/236 (10%)
Query: 322 GKEIRRATNNFSKDNLIGTGGFGEVF-------KGILDDGTVTAIKRAKLGNTKGTDLVL 374
K+ + A +F +G G FG V+ K IL + + +A+L +
Sbjct: 3 SKKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFIL---ALKVLFKAQLEKAGVEHQLR 59
Query: 375 NEVRILCQVNHRSLVRLLGCCVELDQTLMIYEYIPNGTLFDHLHCDFTGKWPPLPWHLRL 434
EV I + H +++RL G + + +I EY P GT++ L K
Sbjct: 60 REVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQ-----KLSKFDEQRTA 114
Query: 435 VIAHQIAEGLTYLHSAAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDSHI 494
++A L+Y HS V HRD+K N+LL K++DFG S +
Sbjct: 115 TYITELANALSYCHSKRV---IHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----- 166
Query: 495 FTTAQGTMGYLDPEYYRNFQLTDKSDVYSFGVVLLELLTSKKAIDFNREEENVNLV 550
TT GT+ YL PE +K D++S GV+ E L K + N +E +
Sbjct: 167 -TTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRI 221
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/232 (27%), Positives = 98/232 (42%), Gaps = 18/232 (7%)
Query: 323 KEIRRATNNFSKDNLIGTGGFGEVFKGILDDGT-VTAIK---RAKLGNTKGTDLVLNEVR 378
K+ + A +F +G G FG V+ + A+K +A+L + EV
Sbjct: 6 KKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVE 65
Query: 379 ILCQVNHRSLVRLLGCCVELDQTLMIYEYIPNGTLFDHLHCDFTGKWPPLPWHLRLVIAH 438
I + H +++RL G + + +I EY P GT++ L K
Sbjct: 66 IQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQ-----KLSKFDEQRTATYIT 120
Query: 439 QIAEGLTYLHSAAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDSHIFTTA 498
++A L+Y HS V HRD+K N+LL K++DFG S + TT
Sbjct: 121 ELANALSYCHSKRV---IHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR------TTL 171
Query: 499 QGTMGYLDPEYYRNFQLTDKSDVYSFGVVLLELLTSKKAIDFNREEENVNLV 550
GT+ YL PE +K D++S GV+ E L K + N +E +
Sbjct: 172 CGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRI 223
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 102/211 (48%), Gaps = 31/211 (14%)
Query: 338 IGTGGFGEV----FKGILDD-GTVTAIKRAKLGNTKGTDLVLNEVRILCQVNHRSLVRLL 392
+G G FG V + + D+ G V A+K+ + + E+ IL + H ++V+
Sbjct: 19 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 78
Query: 393 GCCVELDQT--LMIYEYIPNGTLFDHLHCDFTGKWPPLPWHLRLV-IAHQIAEGLTYLHS 449
G C + +I EY+P G+L D+L K H++L+ QI +G+ YL +
Sbjct: 79 GVCYSAGRRNLKLIMEYLPYGSLRDYLQ-----KHKERIDHIKLLQYTSQICKGMEYLGT 133
Query: 450 AAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVER-------TETNDSHIFTTAQGTM 502
HR++ + NIL++ + K+ DFGL++++ + E +S IF A
Sbjct: 134 KRY---IHRNLATRNILVENENRVKIGDFGLTKVLPQDKEYYKVKEPGESPIFWYA---- 186
Query: 503 GYLDPEYYRNFQLTDKSDVYSFGVVLLELLT 533
PE + + SDV+SFGVVL EL T
Sbjct: 187 ----PESLTESKFSVASDVWSFGVVLYELFT 213
>pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
pdb|3G2F|B Chain B, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
Length = 336
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 68/229 (29%), Positives = 105/229 (45%), Gaps = 38/229 (16%)
Query: 330 NNFSKDNLIGTGGFGEVFKGILDDGTVTAIKRAKLGNTKGTDLVLNEVRI--LCQVNHRS 387
+N LIG G +G V+KG LD+ V A+K N + +NE I + + H +
Sbjct: 13 DNLKLLELIGRGRYGAVYKGSLDERPV-AVKVFSFANRQN---FINEKNIYRVPLMEHDN 68
Query: 388 LVRLL--GCCVELD---QTLMIYEYIPNGTLFDHLHCDFTGKWPPLPWHLRLVIAHQIAE 442
+ R + V D + L++ EY PNG+L +L + W +AH +
Sbjct: 69 IARFIVGDERVTADGRMEYLLVMEYYPNGSLXKYLSLHTSD------WVSSCRLAHSVTR 122
Query: 443 GLTYLHSAA------VPPIYHRDVKSSNILLDEKLNAKVSDFGLS------RLVERTETN 490
GL YLH+ P I HRD+ S N+L+ +SDFGLS RLV E +
Sbjct: 123 GLAYLHTELPRGDHYKPAISHRDLNSRNVLVKNDGTCVISDFGLSMRLTGNRLVRPGEED 182
Query: 491 DSHIFTTAQGTMGYLDPEYYRN-FQLTD------KSDVYSFGVVLLELL 532
++ I + GT+ Y+ PE L D + D+Y+ G++ E+
Sbjct: 183 NAAI--SEVGTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIF 229
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 62/227 (27%), Positives = 95/227 (41%), Gaps = 18/227 (7%)
Query: 328 ATNNFSKDNLIGTGGFGEVFKGILDDGT-VTAIK---RAKLGNTKGTDLVLNEVRILCQV 383
A +F +G G FG V+ + A+K +A+L + EV I +
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 384 NHRSLVRLLGCCVELDQTLMIYEYIPNGTLFDHLHCDFTGKWPPLPWHLRLVIAHQIAEG 443
H +++RL G + + +I EY P GT++ L K ++A
Sbjct: 71 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQ-----KLSKFDEQRTATYITELANA 125
Query: 444 LTYLHSAAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDSHIFTTAQGTMG 503
L+Y HS V HRD+K N+LL K++DFG S + TT GT+
Sbjct: 126 LSYCHSKRV---IHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR------TTLCGTLD 176
Query: 504 YLDPEYYRNFQLTDKSDVYSFGVVLLELLTSKKAIDFNREEENVNLV 550
YL PE +K D++S GV+ E L K + N +E +
Sbjct: 177 YLPPEXIEGRXHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRI 223
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/227 (26%), Positives = 94/227 (41%), Gaps = 18/227 (7%)
Query: 328 ATNNFSKDNLIGTGGFGEVFKGILDDGT-VTAIK---RAKLGNTKGTDLVLNEVRILCQV 383
A +F +G G FG V+ + A+K +A+L + EV I +
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 384 NHRSLVRLLGCCVELDQTLMIYEYIPNGTLFDHLHCDFTGKWPPLPWHLRLVIAHQIAEG 443
H +++RL G + + +I EY P G ++ L K ++A
Sbjct: 71 RHPNILRLYGYFHDATRVYLILEYAPRGEVYKELQ-----KLSKFDEQRTATYITELANA 125
Query: 444 LTYLHSAAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDSHIFTTAQGTMG 503
L+Y HS V HRD+K N+LL K++DFG S + TT GT+
Sbjct: 126 LSYCHSKRV---IHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR------TTLCGTLD 176
Query: 504 YLDPEYYRNFQLTDKSDVYSFGVVLLELLTSKKAIDFNREEENVNLV 550
YL PE +K D++S GV+ E L K + N +E +
Sbjct: 177 YLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRI 223
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 62/223 (27%), Positives = 102/223 (45%), Gaps = 26/223 (11%)
Query: 330 NNFSKDNLIGTGGFGEVFK----GILDDGTVTAIKRAKLGNTKGTD---LVLNEVRILCQ 382
NN +G G FG+V + G+ + V + L +T D +++E++I+
Sbjct: 46 NNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSH 105
Query: 383 V-NHRSLVRLLGCCVELDQTLMIYEYIPNGTLFDHLHCD---------FTGKWPPLPWHL 432
+ H ++V LLG C L+I EY G L + L F L
Sbjct: 106 LGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTLSTRD 165
Query: 433 RLVIAHQIAEGLTYLHSAAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDS 492
L + Q+A+G+ +L S HRDV + N+LL AK+ DFGL+R + NDS
Sbjct: 166 LLHFSSQVAQGMAFLASKNC---IHRDVAARNVLLTNGHVAKIGDFGLARDI----MNDS 218
Query: 493 HIFTTAQGTM--GYLDPEYYRNFQLTDKSDVYSFGVVLLELLT 533
+ + ++ PE + T +SDV+S+G++L E+ +
Sbjct: 219 NYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 261
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 64/229 (27%), Positives = 104/229 (45%), Gaps = 36/229 (15%)
Query: 330 NNFSKDNLIGTGGFGEVFK----GILDDGTVTAIKRAKLGNTKGTD---LVLNEVRILCQ 382
NN +G G FG+V + G+ + V + L +T D +++E++I+
Sbjct: 46 NNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSH 105
Query: 383 V-NHRSLVRLLGCCVELDQTLMIYEYIPNGTLFDHLHCDFTGKWPP-------------- 427
+ H ++V LLG C L+I EY G L + L K PP
Sbjct: 106 LGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLR----RKRPPGLEYSYNPSHNPEE 161
Query: 428 -LPWHLRLVIAHQIAEGLTYLHSAAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVER 486
L L + Q+A+G+ +L S HRDV + N+LL AK+ DFGL+R +
Sbjct: 162 QLSSRDLLHFSSQVAQGMAFLASKNC---IHRDVAARNVLLTNGHVAKIGDFGLARDI-- 216
Query: 487 TETNDSHIFTTAQGTM--GYLDPEYYRNFQLTDKSDVYSFGVVLLELLT 533
NDS+ + ++ PE + T +SDV+S+G++L E+ +
Sbjct: 217 --MNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 263
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 63/230 (27%), Positives = 96/230 (41%), Gaps = 24/230 (10%)
Query: 328 ATNNFSKDNLIGTGGFGEVF-------KGILDDGTVTAIKRAKLGNTKGTDLVLNEVRIL 380
A +F +G G FG V+ K IL + + +A+L + EV I
Sbjct: 5 ALEDFEIGRPLGKGKFGNVYLAREKQSKFIL---ALKVLFKAQLEKAGVEHQLRREVEIQ 61
Query: 381 CQVNHRSLVRLLGCCVELDQTLMIYEYIPNGTLFDHLHCDFTGKWPPLPWHLRLVIAHQI 440
+ H +++RL G + + +I EY P GT++ L K ++
Sbjct: 62 SHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQ-----KLSKFDEQRTATYITEL 116
Query: 441 AEGLTYLHSAAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDSHIFTTAQG 500
A L+Y HS V HRD+K N+LL K++DFG S + TT G
Sbjct: 117 ANALSYCHSKRV---IHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR------TTLCG 167
Query: 501 TMGYLDPEYYRNFQLTDKSDVYSFGVVLLELLTSKKAIDFNREEENVNLV 550
T+ YL PE +K D++S GV+ E L K + N +E +
Sbjct: 168 TLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRI 217
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 74/241 (30%), Positives = 110/241 (45%), Gaps = 50/241 (20%)
Query: 331 NFSKDNLI-----GTGGFGEVFKGIL------DDGTVTAIKRAKLGNTKGTDL--VLNEV 377
F + NL+ G G FG+V K T A+K K N ++L +L+E
Sbjct: 19 EFPRKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLK-ENASPSELRDLLSEF 77
Query: 378 RILCQVNHRSLVRLLGCCVELDQTLMIYEYIPNGTLFDHL-------------------- 417
+L QVNH +++L G C + L+I EY G+L L
Sbjct: 78 NVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSS 137
Query: 418 ---HCDFTGKWPPLPWHLRLVIAHQIAEGLTYLHSAAVPPIYHRDVKSSNILLDEKLNAK 474
H D L + A QI++G+ YL A + HRD+ + NIL+ E K
Sbjct: 138 SLDHPDERA----LTMGDLISFAWQISQGMQYL---AEMKLVHRDLAARNILVAEGRKMK 190
Query: 475 VSDFGLSRLVERTETNDSHIFTTAQGTM--GYLDPEYYRNFQLTDKSDVYSFGVVLLELL 532
+SDFGLSR V DS++ +QG + ++ E + T +SDV+SFGV+L E++
Sbjct: 191 ISDFGLSRDVYE---EDSYV-KRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIV 246
Query: 533 T 533
T
Sbjct: 247 T 247
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 72/226 (31%), Positives = 107/226 (47%), Gaps = 28/226 (12%)
Query: 331 NFSKDNL-----IGTGGFGEVFK----GILDDGT--VTAIKRAKLGNTKGTDLVL-NEVR 378
F +D L +G G FG+V + GI T A+K K G T L +E++
Sbjct: 25 EFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELK 84
Query: 379 ILCQVNHR-SLVRLLGCCVELDQTLM-IYEYIPNGTLFDHLHCDFTGKWPPLPWHLR--- 433
IL + H ++V LLG C + LM I E+ G L +L P P L
Sbjct: 85 ILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKPEDLYKDF 144
Query: 434 LVIAH------QIAEGLTYLHSAAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVERT 487
L + H Q+A+G+ +L S HRD+ + NILL EK K+ DFGL+R + +
Sbjct: 145 LTLEHLIXYSFQVAKGMEFLASRKX---IHRDLAARNILLSEKNVVKICDFGLARDIXKD 201
Query: 488 ETNDSHIFTTAQGTMGYLDPEYYRNFQLTDKSDVYSFGVVLLELLT 533
D A+ + ++ PE + T +SDV+SFGV+L E+ +
Sbjct: 202 P--DXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 245
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 65/207 (31%), Positives = 99/207 (47%), Gaps = 21/207 (10%)
Query: 330 NNFSKDNLIGTGGFGEV-FKGILDDGTVTAIK---RAKLGNTKGTDLVLNEVRILCQVNH 385
+ F + +GTG FG V ++ G A+K + K+ K + LNE RIL VN
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 101
Query: 386 RSLVRLLGCCVELDQTLMIYEYIPNGTLFDHLHCDFTGKWPPLPWHLRLVIAHQIAEGLT 445
LV+L + M+ EY+P G +F HL G++ P H R A QI
Sbjct: 102 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRR--IGRFSE-P-HARFYAA-QIVLTFE 156
Query: 446 YLHSAAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVE-RTETNDSHIFTTAQGTMGY 504
YLHS + +RD+K N+L+D++ +V+DFG ++ V+ RT GT Y
Sbjct: 157 YLHSL---DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT--------WXLCGTPEY 205
Query: 505 LDPEYYRNFQLTDKSDVYSFGVVLLEL 531
L PE + D ++ GV++ E+
Sbjct: 206 LAPEIILSKGYNKAVDWWALGVLIYEM 232
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 101/204 (49%), Gaps = 17/204 (8%)
Query: 338 IGTGGFGEV----FKGILDD-GTVTAIKRAKLGNTKGTDLVLNEVRILCQVNHRSLVRLL 392
+G G FG V + + D+ G V A+K+ + + E+ IL + H ++V+
Sbjct: 21 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 80
Query: 393 GCCVELDQT--LMIYEYIPNGTLFDHLHCDFTGKWPPLPWHLRLV-IAHQIAEGLTYLHS 449
G C + +I E++P G+L ++L K H++L+ QI +G+ YL +
Sbjct: 81 GVCYSAGRRNLKLIMEFLPYGSLREYLQ-----KHKERIDHIKLLQYTSQICKGMEYLGT 135
Query: 450 AAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDSHIFTTAQGTMGYLDPEY 509
HRD+ + NIL++ + K+ DFGL++++ + + + + + + PE
Sbjct: 136 KRY---IHRDLATRNILVENENRVKIGDFGLTKVLPQ-DKEXXKVKEPGESPIFWYAPES 191
Query: 510 YRNFQLTDKSDVYSFGVVLLELLT 533
+ + SDV+SFGVVL EL T
Sbjct: 192 LTESKFSVASDVWSFGVVLYELFT 215
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 63/230 (27%), Positives = 96/230 (41%), Gaps = 24/230 (10%)
Query: 328 ATNNFSKDNLIGTGGFGEVF-------KGILDDGTVTAIKRAKLGNTKGTDLVLNEVRIL 380
A +F +G G FG V+ K IL + + +A+L + EV I
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFIL---ALKVLFKAQLEKAGVEHQLRREVEIQ 65
Query: 381 CQVNHRSLVRLLGCCVELDQTLMIYEYIPNGTLFDHLHCDFTGKWPPLPWHLRLVIAHQI 440
+ H +++RL G + + +I EY P GT++ L K ++
Sbjct: 66 SHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQ-----KLSKFDEQRTATYITEL 120
Query: 441 AEGLTYLHSAAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDSHIFTTAQG 500
A L+Y HS V HRD+K N+LL K++DFG S + TT G
Sbjct: 121 ANALSYCHSKRV---IHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR------TTLCG 171
Query: 501 TMGYLDPEYYRNFQLTDKSDVYSFGVVLLELLTSKKAIDFNREEENVNLV 550
T+ YL PE +K D++S GV+ E L K + N +E +
Sbjct: 172 TLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRI 221
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 72/258 (27%), Positives = 125/258 (48%), Gaps = 28/258 (10%)
Query: 318 RIFTGKEIRRATNNF---SKDNLIGTGGFGEVFKGILDDGTVTAIK-RAKLGNTKG---T 370
RI T K+ A N+F SK ++G G FG+V K + T T +K AK+ T+G
Sbjct: 76 RIVTAKQ--GAVNSFYTVSKTEILGGGRFGQVHKC---EETATGLKLAAKIIKTRGMKDK 130
Query: 371 DLVLNEVRILCQVNHRSLVRLLGCCVELDQTLMIYEYIPNGTLFDHLHCDFTGKWPPLPW 430
+ V NE+ ++ Q++H +L++L + +++ EY+ G LFD + D + L
Sbjct: 131 EEVKNEISVMNQLDHANLIQLYDAFESKNDIVLVMEYVDGGELFDRI-IDESYNLTELD- 188
Query: 431 HLRLVIAHQIAEGLTYLHSAAVPPIYHRDVKSSNIL---LDEKLNAKVSDFGLSRLVERT 487
++ QI EG+ ++H I H D+K NIL D K K+ DFGL+R +
Sbjct: 189 --TILFMKQICEGIRHMHQMY---ILHLDLKPENILCVNRDAK-QIKIIDFGLARRYKPR 242
Query: 488 ETNDSHIFTTAQGTMGYLDPEYYRNFQLTDKSDVYSFGVVLLELLTSKKAIDFNREEENV 547
E GT +L PE ++ +D++S GV+ LL+ + + E +
Sbjct: 243 EK-----LKVNFGTPEFLAPEVVNYDFVSFPTDMWSVGVIAYMLLSGLSPFLGDNDAETL 297
Query: 548 NLVVYMKKIMDEERLMEV 565
N ++ + +++E ++
Sbjct: 298 NNILACRWDLEDEEFQDI 315
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 62/230 (26%), Positives = 96/230 (41%), Gaps = 24/230 (10%)
Query: 328 ATNNFSKDNLIGTGGFGEVF-------KGILDDGTVTAIKRAKLGNTKGTDLVLNEVRIL 380
A +F +G G FG V+ K IL + + +A+L + EV I
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFIL---ALKVLFKAQLEKAGVEHQLRREVEIQ 65
Query: 381 CQVNHRSLVRLLGCCVELDQTLMIYEYIPNGTLFDHLHCDFTGKWPPLPWHLRLVIAHQI 440
+ H +++RL G + + +I EY P GT++ L K ++
Sbjct: 66 SHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQ-----KLSKFDEQRTATYITEL 120
Query: 441 AEGLTYLHSAAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDSHIFTTAQG 500
A L+Y HS V HRD+K N+LL K++DFG S + +D G
Sbjct: 121 ANALSYCHSKRV---IHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRDD------LCG 171
Query: 501 TMGYLDPEYYRNFQLTDKSDVYSFGVVLLELLTSKKAIDFNREEENVNLV 550
T+ YL PE +K D++S GV+ E L K + N +E +
Sbjct: 172 TLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRI 221
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 66/207 (31%), Positives = 99/207 (47%), Gaps = 21/207 (10%)
Query: 330 NNFSKDNLIGTGGFGEV-FKGILDDGTVTAIK---RAKLGNTKGTDLVLNEVRILCQVNH 385
+ F + +GTG FG V ++ G A+K + K+ K + LNE RIL VN
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKEIEHTLNEKRILQAVNF 100
Query: 386 RSLVRLLGCCVELDQTLMIYEYIPNGTLFDHLHCDFTGKWPPLPWHLRLVIAHQIAEGLT 445
LV+L + M+ EY P G +F HL G++ P H R A QI
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRR--IGRFSE-P-HARFYAA-QIVLTFE 155
Query: 446 YLHSAAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVE-RTETNDSHIFTTAQGTMGY 504
YLHS + +RD+K N+++D++ KV+DFGL++ V+ RT GT Y
Sbjct: 156 YLHSL---DLIYRDLKPENLMIDQQGYIKVTDFGLAKRVKGRT--------WXLCGTPEY 204
Query: 505 LDPEYYRNFQLTDKSDVYSFGVVLLEL 531
L PE + D ++ GV++ E+
Sbjct: 205 LAPEIILSKGYNKAVDWWALGVLIYEM 231
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 65/207 (31%), Positives = 99/207 (47%), Gaps = 21/207 (10%)
Query: 330 NNFSKDNLIGTGGFGEV-FKGILDDGTVTAIK---RAKLGNTKGTDLVLNEVRILCQVNH 385
+ F + +GTG FG V ++ G A+K + K+ K + LNE RIL VN
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 386 RSLVRLLGCCVELDQTLMIYEYIPNGTLFDHLHCDFTGKWPPLPWHLRLVIAHQIAEGLT 445
LV+L + M+ EY+P G +F HL G++ P H R A QI
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRR--IGRFSE-P-HARFYAA-QIVLTFE 155
Query: 446 YLHSAAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVE-RTETNDSHIFTTAQGTMGY 504
YLHS + +RD+K N+L+D++ +V+DFG ++ V+ RT GT Y
Sbjct: 156 YLHSL---DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT--------WXLCGTPEY 204
Query: 505 LDPEYYRNFQLTDKSDVYSFGVVLLEL 531
L PE + D ++ GV++ E+
Sbjct: 205 LAPEIILSKGYNKAVDWWALGVLIYEM 231
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 63/230 (27%), Positives = 96/230 (41%), Gaps = 24/230 (10%)
Query: 328 ATNNFSKDNLIGTGGFGEVF-------KGILDDGTVTAIKRAKLGNTKGTDLVLNEVRIL 380
A +F +G G FG V+ K IL + + +A+L + EV I
Sbjct: 3 ALEDFEIGRPLGKGKFGNVYLAREKQRKFIL---ALKVLFKAQLEKAGVEHQLRREVEIQ 59
Query: 381 CQVNHRSLVRLLGCCVELDQTLMIYEYIPNGTLFDHLHCDFTGKWPPLPWHLRLVIAHQI 440
+ H +++RL G + + +I EY P GT++ L K ++
Sbjct: 60 SHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQ-----KLSKFDEQRTATYITEL 114
Query: 441 AEGLTYLHSAAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDSHIFTTAQG 500
A L+Y HS V HRD+K N+LL K++DFG S + TT G
Sbjct: 115 ANALSYCHSKRV---IHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR------TTLCG 165
Query: 501 TMGYLDPEYYRNFQLTDKSDVYSFGVVLLELLTSKKAIDFNREEENVNLV 550
T+ YL PE +K D++S GV+ E L K + N +E +
Sbjct: 166 TLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRI 215
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 65/207 (31%), Positives = 99/207 (47%), Gaps = 21/207 (10%)
Query: 330 NNFSKDNLIGTGGFGEV-FKGILDDGTVTAIK---RAKLGNTKGTDLVLNEVRILCQVNH 385
+ F + +GTG FG V ++ G A+K + K+ K + LNE RIL VN
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 386 RSLVRLLGCCVELDQTLMIYEYIPNGTLFDHLHCDFTGKWPPLPWHLRLVIAHQIAEGLT 445
LV+L + M+ EY+P G +F HL G++ P H R A QI
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRR--IGRFSE-P-HARFYAA-QIVLTFE 155
Query: 446 YLHSAAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVE-RTETNDSHIFTTAQGTMGY 504
YLHS + +RD+K N+L+D++ +V+DFG ++ V+ RT GT Y
Sbjct: 156 YLHSL---DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT--------WXLCGTPEY 204
Query: 505 LDPEYYRNFQLTDKSDVYSFGVVLLEL 531
L PE + D ++ GV++ E+
Sbjct: 205 LAPEIILSKGYNKAVDWWALGVLIYEM 231
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 64/207 (30%), Positives = 96/207 (46%), Gaps = 21/207 (10%)
Query: 330 NNFSKDNLIGTGGFGEV-FKGILDDGTVTAIK---RAKLGNTKGTDLVLNEVRILCQVNH 385
+ F + +GTG FG V ++ G A+K + K+ K + LNE RIL VN
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 101
Query: 386 RSLVRLLGCCVELDQTLMIYEYIPNGTLFDHLHCDFTGKWPPLPWHLRLVIAHQIAEGLT 445
LV+L + M+ EY+P G +F HL P H R A QI
Sbjct: 102 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEP----HARFYAA-QIVLTFE 156
Query: 446 YLHSAAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVE-RTETNDSHIFTTAQGTMGY 504
YLHS + +RD+K N+L+D++ +V+DFG ++ V+ RT GT Y
Sbjct: 157 YLHSL---DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT--------WXLCGTPEY 205
Query: 505 LDPEYYRNFQLTDKSDVYSFGVVLLEL 531
L PE + D ++ GV++ E+
Sbjct: 206 LAPEIILSKGYNKAVDWWALGVLIYEM 232
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 65/207 (31%), Positives = 99/207 (47%), Gaps = 21/207 (10%)
Query: 330 NNFSKDNLIGTGGFGEV-FKGILDDGTVTAIK---RAKLGNTKGTDLVLNEVRILCQVNH 385
+ F + +GTG FG V ++ G A+K + K+ K + LNE RIL VN
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 386 RSLVRLLGCCVELDQTLMIYEYIPNGTLFDHLHCDFTGKWPPLPWHLRLVIAHQIAEGLT 445
LV+L + M+ EY+P G +F HL G++ P H R A QI
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRR--IGRFSE-P-HARFYAA-QIVLTFE 155
Query: 446 YLHSAAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVE-RTETNDSHIFTTAQGTMGY 504
YLHS + +RD+K N+L+D++ +V+DFG ++ V+ RT GT Y
Sbjct: 156 YLHSL---DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT--------WXLCGTPEY 204
Query: 505 LDPEYYRNFQLTDKSDVYSFGVVLLEL 531
L PE + D ++ GV++ E+
Sbjct: 205 LAPEIILSKGYNKAVDWWALGVLIYEM 231
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 64/207 (30%), Positives = 96/207 (46%), Gaps = 21/207 (10%)
Query: 330 NNFSKDNLIGTGGFGEV-FKGILDDGTVTAIK---RAKLGNTKGTDLVLNEVRILCQVNH 385
+ F + +GTG FG V ++ G A+K + K+ K + LNE RIL VN
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 386 RSLVRLLGCCVELDQTLMIYEYIPNGTLFDHLHCDFTGKWPPLPWHLRLVIAHQIAEGLT 445
LV+L + M+ EY+P G +F HL P H R A QI
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEP----HARFYAA-QIVLTFE 155
Query: 446 YLHSAAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVE-RTETNDSHIFTTAQGTMGY 504
YLHS + +RD+K N+L+D++ +V+DFG ++ V+ RT GT Y
Sbjct: 156 YLHSL---DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT--------WXLCGTPEY 204
Query: 505 LDPEYYRNFQLTDKSDVYSFGVVLLEL 531
L PE + D ++ GV++ E+
Sbjct: 205 LAPEIILSKGYNKAVDWWALGVLIYEM 231
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 64/207 (30%), Positives = 96/207 (46%), Gaps = 21/207 (10%)
Query: 330 NNFSKDNLIGTGGFGEV-FKGILDDGTVTAIK---RAKLGNTKGTDLVLNEVRILCQVNH 385
+ F + +GTG FG V ++ G A+K + K+ K + LNE RIL VN
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 386 RSLVRLLGCCVELDQTLMIYEYIPNGTLFDHLHCDFTGKWPPLPWHLRLVIAHQIAEGLT 445
LV+L + M+ EY+P G +F HL P H R A QI
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEP----HARFYAA-QIVLTFE 155
Query: 446 YLHSAAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVE-RTETNDSHIFTTAQGTMGY 504
YLHS + +RD+K N+L+D++ +V+DFG ++ V+ RT GT Y
Sbjct: 156 YLHSL---DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT--------WXLCGTPEY 204
Query: 505 LDPEYYRNFQLTDKSDVYSFGVVLLEL 531
L PE + D ++ GV++ E+
Sbjct: 205 LAPEIILSKGYNKAVDWWALGVLIYEM 231
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 63/236 (26%), Positives = 99/236 (41%), Gaps = 24/236 (10%)
Query: 322 GKEIRRATNNFSKDNLIGTGGFGEVF-------KGILDDGTVTAIKRAKLGNTKGTDLVL 374
K+ + A +F +G G FG V+ K IL + + +A+L +
Sbjct: 1 SKKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFIL---ALKVLFKAQLEKAGVEHQLR 57
Query: 375 NEVRILCQVNHRSLVRLLGCCVELDQTLMIYEYIPNGTLFDHLHCDFTGKWPPLPWHLRL 434
EV I + H +++RL G + + +I EY P GT++ L K
Sbjct: 58 REVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQ-----KLSKFDEQRTA 112
Query: 435 VIAHQIAEGLTYLHSAAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDSHI 494
++A L+Y HS V HRD+K N+LL K++DFG S + +
Sbjct: 113 TYITELANALSYCHSKRV---IHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRD---- 165
Query: 495 FTTAQGTMGYLDPEYYRNFQLTDKSDVYSFGVVLLELLTSKKAIDFNREEENVNLV 550
T GT+ YL PE +K D++S GV+ E L K + N +E +
Sbjct: 166 --TLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRI 219
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 63/236 (26%), Positives = 98/236 (41%), Gaps = 24/236 (10%)
Query: 322 GKEIRRATNNFSKDNLIGTGGFGEVF-------KGILDDGTVTAIKRAKLGNTKGTDLVL 374
K+ + A +F +G G FG V+ K IL + + +A+L +
Sbjct: 1 SKKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFIL---ALKVLFKAQLEKAGVEHQLR 57
Query: 375 NEVRILCQVNHRSLVRLLGCCVELDQTLMIYEYIPNGTLFDHLHCDFTGKWPPLPWHLRL 434
EV I + H +++RL G + + +I EY P GT++ L K
Sbjct: 58 REVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQ-----KLSKFDEQRTA 112
Query: 435 VIAHQIAEGLTYLHSAAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDSHI 494
++A L+Y HS V HRD+K N+LL K++DFG S + D
Sbjct: 113 TYITELANALSYCHSKRV---IHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTD--- 166
Query: 495 FTTAQGTMGYLDPEYYRNFQLTDKSDVYSFGVVLLELLTSKKAIDFNREEENVNLV 550
GT+ YL PE +K D++S GV+ E L K + N +E +
Sbjct: 167 ---LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRI 219
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 63/235 (26%), Positives = 98/235 (41%), Gaps = 24/235 (10%)
Query: 323 KEIRRATNNFSKDNLIGTGGFGEVF-------KGILDDGTVTAIKRAKLGNTKGTDLVLN 375
K+ + A +F +G G FG V+ K IL + + +A+L +
Sbjct: 1 KKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFIL---ALKVLFKAQLEKAGVEHQLRR 57
Query: 376 EVRILCQVNHRSLVRLLGCCVELDQTLMIYEYIPNGTLFDHLHCDFTGKWPPLPWHLRLV 435
EV I + H +++RL G + + +I EY P GT++ L K
Sbjct: 58 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQ-----KLSKFDEQRTAT 112
Query: 436 IAHQIAEGLTYLHSAAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDSHIF 495
++A L+Y HS V HRD+K N+LL K++DFG S + D
Sbjct: 113 YITELANALSYCHSKRV---IHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTD---- 165
Query: 496 TTAQGTMGYLDPEYYRNFQLTDKSDVYSFGVVLLELLTSKKAIDFNREEENVNLV 550
GT+ YL PE +K D++S GV+ E L K + N +E +
Sbjct: 166 --LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRI 218
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 63/235 (26%), Positives = 98/235 (41%), Gaps = 24/235 (10%)
Query: 323 KEIRRATNNFSKDNLIGTGGFGEVF-------KGILDDGTVTAIKRAKLGNTKGTDLVLN 375
K+ + A +F +G G FG V+ K IL + + +A+L +
Sbjct: 6 KKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFIL---ALKVLFKAQLEKAGVEHQLRR 62
Query: 376 EVRILCQVNHRSLVRLLGCCVELDQTLMIYEYIPNGTLFDHLHCDFTGKWPPLPWHLRLV 435
EV I + H +++RL G + + +I EY P GT++ L K
Sbjct: 63 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQ-----KLSKFDEQRTAT 117
Query: 436 IAHQIAEGLTYLHSAAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDSHIF 495
++A L+Y HS V HRD+K N+LL K++DFG S + D
Sbjct: 118 YITELANALSYCHSKRV---IHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTD---- 170
Query: 496 TTAQGTMGYLDPEYYRNFQLTDKSDVYSFGVVLLELLTSKKAIDFNREEENVNLV 550
GT+ YL PE +K D++S GV+ E L K + N +E +
Sbjct: 171 --LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRI 223
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 62/230 (26%), Positives = 95/230 (41%), Gaps = 24/230 (10%)
Query: 328 ATNNFSKDNLIGTGGFGEVF-------KGILDDGTVTAIKRAKLGNTKGTDLVLNEVRIL 380
A +F +G G FG V+ K IL + + +A+L + EV I
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFIL---ALKVLFKAQLEKAGVEHQLRREVEIQ 62
Query: 381 CQVNHRSLVRLLGCCVELDQTLMIYEYIPNGTLFDHLHCDFTGKWPPLPWHLRLVIAHQI 440
+ H +++RL G + + +I EY P GT++ L K ++
Sbjct: 63 SHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQ-----KLSKFDEQRTATYITEL 117
Query: 441 AEGLTYLHSAAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDSHIFTTAQG 500
A L+Y HS V HRD+K N+LL K++DFG S + D G
Sbjct: 118 ANALSYCHSKRV---IHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTD------LCG 168
Query: 501 TMGYLDPEYYRNFQLTDKSDVYSFGVVLLELLTSKKAIDFNREEENVNLV 550
T+ YL PE +K D++S GV+ E L K + N +E +
Sbjct: 169 TLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRI 218
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 63/207 (30%), Positives = 97/207 (46%), Gaps = 21/207 (10%)
Query: 330 NNFSKDNLIGTGGFGEVF----KGILDDGTVTAIKRAKLGNTKGTDLVLNEVRILCQVNH 385
+ F + +GTG FG V K + + + + K+ K + LNE RIL VN
Sbjct: 34 DQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 93
Query: 386 RSLVRLLGCCVELDQTLMIYEYIPNGTLFDHLHCDFTGKWPPLPWHLRLVIAHQIAEGLT 445
LV+L + M+ EY+P G +F HL G++ P H R A QI
Sbjct: 94 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRR--IGRFSE-P-HARFYAA-QIVLTFE 148
Query: 446 YLHSAAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVE-RTETNDSHIFTTAQGTMGY 504
YLHS + +RD+K N+L+D++ +V+DFG ++ V+ RT GT Y
Sbjct: 149 YLHSL---DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT--------WXLCGTPEY 197
Query: 505 LDPEYYRNFQLTDKSDVYSFGVVLLEL 531
L PE + D ++ GV++ E+
Sbjct: 198 LAPEIILSKGYNKAVDWWALGVLIYEM 224
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 63/207 (30%), Positives = 97/207 (46%), Gaps = 21/207 (10%)
Query: 330 NNFSKDNLIGTGGFGEVF----KGILDDGTVTAIKRAKLGNTKGTDLVLNEVRILCQVNH 385
+ F + +GTG FG V K + + + + K+ K + LNE RIL VN
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 101
Query: 386 RSLVRLLGCCVELDQTLMIYEYIPNGTLFDHLHCDFTGKWPPLPWHLRLVIAHQIAEGLT 445
LV+L + M+ EY+P G +F HL G++ P H R A QI
Sbjct: 102 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRR--IGRFSE-P-HARFYAA-QIVLTFE 156
Query: 446 YLHSAAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVE-RTETNDSHIFTTAQGTMGY 504
YLHS + +RD+K N+L+D++ +V+DFG ++ V+ RT GT Y
Sbjct: 157 YLHSL---DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT--------WXLCGTPEY 205
Query: 505 LDPEYYRNFQLTDKSDVYSFGVVLLEL 531
L PE + D ++ GV++ E+
Sbjct: 206 LAPEIILSKGYNKAVDWWALGVLIYEM 232
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 73/241 (30%), Positives = 109/241 (45%), Gaps = 50/241 (20%)
Query: 331 NFSKDNLI-----GTGGFGEVFKGIL------DDGTVTAIKRAKLGNTKGTDL--VLNEV 377
F + NL+ G G FG+V K T A+K K N ++L +L+E
Sbjct: 19 EFPRKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLK-ENASPSELRDLLSEF 77
Query: 378 RILCQVNHRSLVRLLGCCVELDQTLMIYEYIPNGTLFDHL-------------------- 417
+L QVNH +++L G C + L+I EY G+L L
Sbjct: 78 NVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSS 137
Query: 418 ---HCDFTGKWPPLPWHLRLVIAHQIAEGLTYLHSAAVPPIYHRDVKSSNILLDEKLNAK 474
H D L + A QI++G+ YL + + HRD+ + NIL+ E K
Sbjct: 138 SLDHPDERA----LTMGDLISFAWQISQGMQYLAEMS---LVHRDLAARNILVAEGRKMK 190
Query: 475 VSDFGLSRLVERTETNDSHIFTTAQGTM--GYLDPEYYRNFQLTDKSDVYSFGVVLLELL 532
+SDFGLSR V DS + +QG + ++ E + T +SDV+SFGV+L E++
Sbjct: 191 ISDFGLSRDVYE---EDSXV-KRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIV 246
Query: 533 T 533
T
Sbjct: 247 T 247
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 63/207 (30%), Positives = 97/207 (46%), Gaps = 21/207 (10%)
Query: 330 NNFSKDNLIGTGGFGEVF----KGILDDGTVTAIKRAKLGNTKGTDLVLNEVRILCQVNH 385
+ F + +GTG FG V K + + + + K+ K + LNE RIL VN
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 386 RSLVRLLGCCVELDQTLMIYEYIPNGTLFDHLHCDFTGKWPPLPWHLRLVIAHQIAEGLT 445
LV+L + M+ EY+P G +F HL G++ P H R A QI
Sbjct: 101 PFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRR--IGRFSE-P-HARFYAA-QIVLTFE 155
Query: 446 YLHSAAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVE-RTETNDSHIFTTAQGTMGY 504
YLHS + +RD+K N+L+D++ +V+DFG ++ V+ RT GT Y
Sbjct: 156 YLHSL---DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT--------WXLCGTPEY 204
Query: 505 LDPEYYRNFQLTDKSDVYSFGVVLLEL 531
L PE + D ++ GV++ E+
Sbjct: 205 LAPEIILSKGYNKAVDWWALGVLIYEM 231
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 63/207 (30%), Positives = 97/207 (46%), Gaps = 21/207 (10%)
Query: 330 NNFSKDNLIGTGGFGEVF----KGILDDGTVTAIKRAKLGNTKGTDLVLNEVRILCQVNH 385
+ F + +GTG FG V K + + + + K+ K + LNE RIL VN
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 101
Query: 386 RSLVRLLGCCVELDQTLMIYEYIPNGTLFDHLHCDFTGKWPPLPWHLRLVIAHQIAEGLT 445
LV+L + M+ EY+P G +F HL G++ P H R A QI
Sbjct: 102 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRR--IGRFSE-P-HARFYAA-QIVLTFE 156
Query: 446 YLHSAAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVE-RTETNDSHIFTTAQGTMGY 504
YLHS + +RD+K N+L+D++ +V+DFG ++ V+ RT GT Y
Sbjct: 157 YLHSL---DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT--------WXLCGTPEY 205
Query: 505 LDPEYYRNFQLTDKSDVYSFGVVLLEL 531
L PE + D ++ GV++ E+
Sbjct: 206 LAPEIILSKGYNKAVDWWALGVLIYEM 232
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 63/207 (30%), Positives = 97/207 (46%), Gaps = 21/207 (10%)
Query: 330 NNFSKDNLIGTGGFGEVF----KGILDDGTVTAIKRAKLGNTKGTDLVLNEVRILCQVNH 385
+ F + +GTG FG V K + + + + K+ K + LNE RIL VN
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 101
Query: 386 RSLVRLLGCCVELDQTLMIYEYIPNGTLFDHLHCDFTGKWPPLPWHLRLVIAHQIAEGLT 445
LV+L + M+ EY+P G +F HL G++ P H R A QI
Sbjct: 102 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRR--IGRFSE-P-HARFYAA-QIVLTFE 156
Query: 446 YLHSAAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVE-RTETNDSHIFTTAQGTMGY 504
YLHS + +RD+K N+L+D++ +V+DFG ++ V+ RT GT Y
Sbjct: 157 YLHSL---DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT--------WXLCGTPEY 205
Query: 505 LDPEYYRNFQLTDKSDVYSFGVVLLEL 531
L PE + D ++ GV++ E+
Sbjct: 206 LAPEIILSKGYNKAVDWWALGVLIYEM 232
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 63/207 (30%), Positives = 97/207 (46%), Gaps = 21/207 (10%)
Query: 330 NNFSKDNLIGTGGFGEVF----KGILDDGTVTAIKRAKLGNTKGTDLVLNEVRILCQVNH 385
+ F + +GTG FG V K + + + + K+ K + LNE RIL VN
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 386 RSLVRLLGCCVELDQTLMIYEYIPNGTLFDHLHCDFTGKWPPLPWHLRLVIAHQIAEGLT 445
LV+L + M+ EY+P G +F HL G++ P H R A QI
Sbjct: 101 PFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRR--IGRFSE-P-HARFYAA-QIVLTFE 155
Query: 446 YLHSAAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVE-RTETNDSHIFTTAQGTMGY 504
YLHS + +RD+K N+L+D++ +V+DFG ++ V+ RT GT Y
Sbjct: 156 YLHSL---DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT--------WXLCGTPEY 204
Query: 505 LDPEYYRNFQLTDKSDVYSFGVVLLEL 531
L PE + D ++ GV++ E+
Sbjct: 205 LAPEIILSKGYNKAVDWWALGVLIYEM 231
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 63/207 (30%), Positives = 97/207 (46%), Gaps = 21/207 (10%)
Query: 330 NNFSKDNLIGTGGFGEVF----KGILDDGTVTAIKRAKLGNTKGTDLVLNEVRILCQVNH 385
+ F + +GTG FG V K + + + + K+ K + LNE RIL VN
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 386 RSLVRLLGCCVELDQTLMIYEYIPNGTLFDHLHCDFTGKWPPLPWHLRLVIAHQIAEGLT 445
LV+L + M+ EY+P G +F HL G++ P H R A QI
Sbjct: 101 PFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRR--IGRFSE-P-HARFYAA-QIVLTFE 155
Query: 446 YLHSAAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVE-RTETNDSHIFTTAQGTMGY 504
YLHS + +RD+K N+L+D++ +V+DFG ++ V+ RT GT Y
Sbjct: 156 YLHSL---DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT--------WXLCGTPEY 204
Query: 505 LDPEYYRNFQLTDKSDVYSFGVVLLEL 531
L PE + D ++ GV++ E+
Sbjct: 205 LAPEIILSKGYNKAVDWWALGVLIYEM 231
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 62/207 (29%), Positives = 94/207 (45%), Gaps = 21/207 (10%)
Query: 330 NNFSKDNLIGTGGFGEVF----KGILDDGTVTAIKRAKLGNTKGTDLVLNEVRILCQVNH 385
+ F + +GTG FG V K + + + + K+ K + LNE RIL VN
Sbjct: 62 DQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 121
Query: 386 RSLVRLLGCCVELDQTLMIYEYIPNGTLFDHLHCDFTGKWPPLPWHLRLVIAHQIAEGLT 445
LV+L + M+ EY+P G +F HL P H R A QI
Sbjct: 122 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEP----HARFYAA-QIVLTFE 176
Query: 446 YLHSAAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVE-RTETNDSHIFTTAQGTMGY 504
YLHS + +RD+K N+L+D++ +V+DFG ++ V+ RT GT Y
Sbjct: 177 YLHSL---DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT--------WXLCGTPEY 225
Query: 505 LDPEYYRNFQLTDKSDVYSFGVVLLEL 531
L PE + D ++ GV++ E+
Sbjct: 226 LAPEIILSKGYNKAVDWWALGVLIYEM 252
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 62/207 (29%), Positives = 94/207 (45%), Gaps = 21/207 (10%)
Query: 330 NNFSKDNLIGTGGFGEVF----KGILDDGTVTAIKRAKLGNTKGTDLVLNEVRILCQVNH 385
+ F + +GTG FG V K + + + + K+ K + LNE RIL VN
Sbjct: 34 DQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 93
Query: 386 RSLVRLLGCCVELDQTLMIYEYIPNGTLFDHLHCDFTGKWPPLPWHLRLVIAHQIAEGLT 445
LV+L + M+ EY+P G +F HL P H R A QI
Sbjct: 94 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEP----HARFYAA-QIVLTFE 148
Query: 446 YLHSAAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVE-RTETNDSHIFTTAQGTMGY 504
YLHS + +RD+K N+L+D++ +V+DFG ++ V+ RT GT Y
Sbjct: 149 YLHSL---DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT--------WXLCGTPEY 197
Query: 505 LDPEYYRNFQLTDKSDVYSFGVVLLEL 531
L PE + D ++ GV++ E+
Sbjct: 198 LAPEIILSKGYNKAVDWWALGVLIYEM 224
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 72.4 bits (176), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 62/230 (26%), Positives = 95/230 (41%), Gaps = 24/230 (10%)
Query: 328 ATNNFSKDNLIGTGGFGEVF-------KGILDDGTVTAIKRAKLGNTKGTDLVLNEVRIL 380
A +F +G G FG V+ K IL + + +A+L + EV I
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFIL---ALKVLFKAQLEKAGVEHQLRREVEIQ 62
Query: 381 CQVNHRSLVRLLGCCVELDQTLMIYEYIPNGTLFDHLHCDFTGKWPPLPWHLRLVIAHQI 440
+ H +++RL G + + +I EY P GT++ L K ++
Sbjct: 63 SHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQ-----KLSKFDEQRTATYITEL 117
Query: 441 AEGLTYLHSAAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDSHIFTTAQG 500
A L+Y HS V HRD+K N+LL K++DFG S + T G
Sbjct: 118 ANALSYCHSKRV---IHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR------TELCG 168
Query: 501 TMGYLDPEYYRNFQLTDKSDVYSFGVVLLELLTSKKAIDFNREEENVNLV 550
T+ YL PE +K D++S GV+ E L K + N +E +
Sbjct: 169 TLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRI 218
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 72.4 bits (176), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 65/207 (31%), Positives = 98/207 (47%), Gaps = 21/207 (10%)
Query: 330 NNFSKDNLIGTGGFGEV-FKGILDDGTVTAIK---RAKLGNTKGTDLVLNEVRILCQVNH 385
+ F + +GTG FG V ++ G A+K + K+ K + LNE RIL VN
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 386 RSLVRLLGCCVELDQTLMIYEYIPNGTLFDHLHCDFTGKWPPLPWHLRLVIAHQIAEGLT 445
LV+L + M+ EY P G +F HL G++ P H R A QI
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRR--IGRFSE-P-HARFYAA-QIVLTFE 155
Query: 446 YLHSAAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVE-RTETNDSHIFTTAQGTMGY 504
YLHS + +RD+K N+++D++ KV+DFG ++ V+ RT GT Y
Sbjct: 156 YLHSL---DLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRT--------WXLCGTPEY 204
Query: 505 LDPEYYRNFQLTDKSDVYSFGVVLLEL 531
L PE + D ++ GV++ E+
Sbjct: 205 LAPEIILSKGYNKAVDWWALGVLIYEM 231
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 72.4 bits (176), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 74/241 (30%), Positives = 109/241 (45%), Gaps = 50/241 (20%)
Query: 331 NFSKDNLI-----GTGGFGEVFKGIL------DDGTVTAIKRAKLGNTKGTDL--VLNEV 377
F + NL+ G G FG+V K T A+K K N ++L +L+E
Sbjct: 19 EFPRKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLK-ENASPSELRDLLSEF 77
Query: 378 RILCQVNHRSLVRLLGCCVELDQTLMIYEYIPNGTLFDHL-------------------- 417
+L QVNH +++L G C + L+I EY G+L L
Sbjct: 78 NVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSS 137
Query: 418 ---HCDFTGKWPPLPWHLRLVIAHQIAEGLTYLHSAAVPPIYHRDVKSSNILLDEKLNAK 474
H D L + A QI++G+ YL A + HRD+ + NIL+ E K
Sbjct: 138 SLDHPDERA----LTMGDLISFAWQISQGMQYL---AEMKLVHRDLAARNILVAEGRKMK 190
Query: 475 VSDFGLSRLVERTETNDSHIFTTAQGTM--GYLDPEYYRNFQLTDKSDVYSFGVVLLELL 532
+SDFGLSR V DS + +QG + ++ E + T +SDV+SFGV+L E++
Sbjct: 191 ISDFGLSRDVYE---EDSXV-KRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIV 246
Query: 533 T 533
T
Sbjct: 247 T 247
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 62/233 (26%), Positives = 98/233 (42%), Gaps = 18/233 (7%)
Query: 322 GKEIRRATNNFSKDNLIGTGGFGEVFKGILDDGT-VTAIK---RAKLGNTKGTDLVLNEV 377
K+ + A +F +G G FG V+ + A+K +A+L + EV
Sbjct: 2 SKKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREV 61
Query: 378 RILCQVNHRSLVRLLGCCVELDQTLMIYEYIPNGTLFDHLHCDFTGKWPPLPWHLRLVIA 437
I + H +++RL G + + +I EY P GT++ L K
Sbjct: 62 EIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQ-----KLSKFDEQRTATYI 116
Query: 438 HQIAEGLTYLHSAAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDSHIFTT 497
++A L+Y HS V HRD+K N+LL K+++FG S + TT
Sbjct: 117 TELANALSYCHSKRV---IHRDIKPENLLLGSAGELKIANFGWSVHAPSSRR------TT 167
Query: 498 AQGTMGYLDPEYYRNFQLTDKSDVYSFGVVLLELLTSKKAIDFNREEENVNLV 550
GT+ YL PE +K D++S GV+ E L K + N +E +
Sbjct: 168 LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRI 220
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 71/240 (29%), Positives = 113/240 (47%), Gaps = 23/240 (9%)
Query: 305 EEMLNAKAAGKSARIFTGKEIRRATNNFSKDNLIGTGGFGEVF--KGI--LDDGTVTAIK 360
E++L K ++A + TG + NF ++GTG +G+VF + I D G + A+K
Sbjct: 30 EQLLTVKHELRTANL-TGHAEKVGIENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMK 88
Query: 361 RAK----LGNTKGTDLVLNEVRILCQVNHRSLVRLLGCCVELDQTL-MIYEYIPNGTLFD 415
K + K T+ E ++L + + L + + L +I +YI G LF
Sbjct: 89 VLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTETKLHLILDYINGGELFT 148
Query: 416 HLHCDFTGKWPPLPWHLRLVIAHQIAEGLTYLHSAAVPPIYHRDVKSSNILLDEKLNAKV 475
HL + H + +I L +LH I +RD+K NILLD + +
Sbjct: 149 HL-----SQRERFTEHEVQIYVGEIVLALEHLHKLG---IIYRDIKLENILLDSNGHVVL 200
Query: 476 SDFGLSRLVERTETNDSHIFTTAQGTMGYLDPEYYRNFQL-TDKS-DVYSFGVVLLELLT 533
+DFGLS+ ET ++ F GT+ Y+ P+ R DK+ D +S GV++ ELLT
Sbjct: 201 TDFGLSKEFVADETERAYDFC---GTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLT 257
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 72.4 bits (176), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 64/207 (30%), Positives = 95/207 (45%), Gaps = 21/207 (10%)
Query: 330 NNFSKDNLIGTGGFGEV-FKGILDDGTVTAIK---RAKLGNTKGTDLVLNEVRILCQVNH 385
+ F + +GTG FG V ++ G A+K + K+ K + LNE RIL VN
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 386 RSLVRLLGCCVELDQTLMIYEYIPNGTLFDHLHCDFTGKWPPLPWHLRLVIAHQIAEGLT 445
LV+L + M+ EY P G +F HL P H R A QI
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFXEP----HARFYAA-QIVLTFE 155
Query: 446 YLHSAAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVE-RTETNDSHIFTTAQGTMGY 504
YLHS + +RD+K N+++D++ KV+DFG ++ V+ RT GT Y
Sbjct: 156 YLHSL---DLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRT--------WXLCGTPEY 204
Query: 505 LDPEYYRNFQLTDKSDVYSFGVVLLEL 531
L PE + D ++ GV++ E+
Sbjct: 205 LAPEIILSKGYNKAVDWWALGVLIYEM 231
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 72.4 bits (176), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 68/239 (28%), Positives = 106/239 (44%), Gaps = 25/239 (10%)
Query: 301 IKQREEMLNAKAAGKSARIFTGKEIRRATNNFSKDNLIGTGGFGEVFKGIL----DDGTV 356
I E + A G S R + EI+R + IG G FG+V +GI +
Sbjct: 14 IPTTENLYFQGAMGSSTRDY---EIQRERIELGR--CIGEGQFGDVHQGIYMSPENPALA 68
Query: 357 TAIKRAKLGNTKGT-DLVLNEVRILCQVNHRSLVRLLGCCVELDQTLMIYEYIPNGTLFD 415
AIK K + + L E + Q +H +V+L+G E + +I E G L
Sbjct: 69 VAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVITE-NPVWIIMELCTLGELRS 127
Query: 416 HLHCDFTGKWPPLPWHLRLVIAHQIAEGLTYLHSAAVPPIYHRDVKSSNILLDEKLNAKV 475
L + L ++ A+Q++ L YL S HRD+ + N+L+ K+
Sbjct: 128 FLQV----RKYSLDLASLILYAYQLSTALAYLESKR---FVHRDIAARNVLVSSNDCVKL 180
Query: 476 SDFGLSRLVERTETNDSHIFTTAQGTM--GYLDPEYYRNFQLTDKSDVYSFGVVLLELL 532
DFGLSR +E DS + ++G + ++ PE + T SDV+ FGV + E+L
Sbjct: 181 GDFGLSRYME-----DSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEIL 234
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 72.0 bits (175), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 54/183 (29%), Positives = 90/183 (49%), Gaps = 9/183 (4%)
Query: 357 TAIKRAKLGNTKGT-DLVLNEVRILCQVNHRSLVRLLGCCVELDQTLMIYEYIPNGTLFD 415
AIKR L + + D +L E++ + Q +H ++V V D+ ++ + + G++ D
Sbjct: 43 VAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYTSFVVKDELWLVMKLLSGGSVLD 102
Query: 416 ---HLHCDFTGKWPPLPWHLRLVIAHQIAEGLTYLHSAAVPPIYHRDVKSSNILLDEKLN 472
H+ K L I ++ EGL YLH HRDVK+ NILL E +
Sbjct: 103 IIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKNGQ---IHRDVKAGNILLGEDGS 159
Query: 473 AKVSDFGLSR-LVERTETNDSHIFTTAQGTMGYLDPEYYRNFQLTD-KSDVYSFGVVLLE 530
+++DFG+S L + + + T GT ++ PE + D K+D++SFG+ +E
Sbjct: 160 VQIADFGVSAFLATGGDITRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIE 219
Query: 531 LLT 533
L T
Sbjct: 220 LAT 222
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 72.0 bits (175), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 54/183 (29%), Positives = 90/183 (49%), Gaps = 9/183 (4%)
Query: 357 TAIKRAKLGNTKGT-DLVLNEVRILCQVNHRSLVRLLGCCVELDQTLMIYEYIPNGTLFD 415
AIKR L + + D +L E++ + Q +H ++V V D+ ++ + + G++ D
Sbjct: 38 VAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYTSFVVKDELWLVMKLLSGGSVLD 97
Query: 416 ---HLHCDFTGKWPPLPWHLRLVIAHQIAEGLTYLHSAAVPPIYHRDVKSSNILLDEKLN 472
H+ K L I ++ EGL YLH HRDVK+ NILL E +
Sbjct: 98 IIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKNGQ---IHRDVKAGNILLGEDGS 154
Query: 473 AKVSDFGLSR-LVERTETNDSHIFTTAQGTMGYLDPEYYRNFQLTD-KSDVYSFGVVLLE 530
+++DFG+S L + + + T GT ++ PE + D K+D++SFG+ +E
Sbjct: 155 VQIADFGVSAFLATGGDITRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIE 214
Query: 531 LLT 533
L T
Sbjct: 215 LAT 217
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 72.0 bits (175), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 65/207 (31%), Positives = 99/207 (47%), Gaps = 21/207 (10%)
Query: 330 NNFSKDNLIGTGGFGEV-FKGILDDGTVTAIK---RAKLGNTKGTDLVLNEVRILCQVNH 385
+ F + +GTG FG V ++ G A+K + K+ K + LNE RIL VN
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKEIEHTLNEKRILQAVNF 100
Query: 386 RSLVRLLGCCVELDQTLMIYEYIPNGTLFDHLHCDFTGKWPPLPWHLRLVIAHQIAEGLT 445
LV+L + M+ EY P G +F HL G++ P H R A QI
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRR--IGRFSE-P-HARFYAA-QIVLTFE 155
Query: 446 YLHSAAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVE-RTETNDSHIFTTAQGTMGY 504
YLHS + +RD+K N+++D++ +V+DFGL++ V+ RT GT Y
Sbjct: 156 YLHSL---DLIYRDLKPENLMIDQQGYIQVTDFGLAKRVKGRT--------WXLCGTPEY 204
Query: 505 LDPEYYRNFQLTDKSDVYSFGVVLLEL 531
L PE + D ++ GV++ E+
Sbjct: 205 LAPEIILSKGYNKAVDWWALGVLIYEM 231
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 72.0 bits (175), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 91/209 (43%), Gaps = 28/209 (13%)
Query: 338 IGTGGFGEVFKGILDDGT-------VTAIKRAKLGNTKGTDLVLNEVRILCQVNHRSLVR 390
+G G FG V +G D + V +K L + D + EV + ++HR+L+R
Sbjct: 20 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 79
Query: 391 LLGCCVELDQTLMIYEYIPNGTLFDHLHCDFTGKWPPLPWHLRL----VIAHQIAEGLTY 446
L G + M+ E P G+L D L G H L A Q+AEG+ Y
Sbjct: 80 LYGVVLTPPMK-MVTELAPLGSLLDRLR-KHQG-------HFLLGTLSRYAVQVAEGMGY 130
Query: 447 LHSAAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDSHIFTTAQGTM--GY 504
L S HRD+ + N+LL + K+ DFGL R + + ND H + +
Sbjct: 131 LESKR---FIHRDLAARNLLLATRDLVKIGDFGLMRALPQ---NDDHYVMQEHRKVPFAW 184
Query: 505 LDPEYYRNFQLTDKSDVYSFGVVLLELLT 533
PE + + SD + FGV L E+ T
Sbjct: 185 CAPESLKTRTFSHASDTWMFGVTLWEMFT 213
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 72.0 bits (175), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 63/207 (30%), Positives = 96/207 (46%), Gaps = 21/207 (10%)
Query: 330 NNFSKDNLIGTGGFGEVF----KGILDDGTVTAIKRAKLGNTKGTDLVLNEVRILCQVNH 385
+ F + +GTG FG V K + + + + K+ K + LNE RIL VN
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 101
Query: 386 RSLVRLLGCCVELDQTLMIYEYIPNGTLFDHLHCDFTGKWPPLPWHLRLVIAHQIAEGLT 445
LV+L + M+ EY P G +F HL G++ P H R A QI
Sbjct: 102 PFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRR--IGRFSE-P-HARFYAA-QIVLTFE 156
Query: 446 YLHSAAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVE-RTETNDSHIFTTAQGTMGY 504
YLHS + +RD+K N+++D++ KV+DFG ++ V+ RT GT Y
Sbjct: 157 YLHSL---DLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRT--------WXLCGTPEY 205
Query: 505 LDPEYYRNFQLTDKSDVYSFGVVLLEL 531
L PE + D ++ GV++ E+
Sbjct: 206 LAPEIILSKGYNKAVDWWALGVLIYEM 232
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 91/209 (43%), Gaps = 28/209 (13%)
Query: 338 IGTGGFGEVFKGILDDGT-------VTAIKRAKLGNTKGTDLVLNEVRILCQVNHRSLVR 390
+G G FG V +G D + V +K L + D + EV + ++HR+L+R
Sbjct: 26 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 85
Query: 391 LLGCCVELDQTLMIYEYIPNGTLFDHLHCDFTGKWPPLPWHLRL----VIAHQIAEGLTY 446
L G + M+ E P G+L D L G H L A Q+AEG+ Y
Sbjct: 86 LYGVVLTPPMK-MVTELAPLGSLLDRLR-KHQG-------HFLLGTLSRYAVQVAEGMGY 136
Query: 447 LHSAAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDSHIFTTAQGTM--GY 504
L S HRD+ + N+LL + K+ DFGL R + + ND H + +
Sbjct: 137 LESKR---FIHRDLAARNLLLATRDLVKIGDFGLMRALPQ---NDDHXVMQEHRKVPFAW 190
Query: 505 LDPEYYRNFQLTDKSDVYSFGVVLLELLT 533
PE + + SD + FGV L E+ T
Sbjct: 191 CAPESLKTRTFSHASDTWMFGVTLWEMFT 219
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 91/209 (43%), Gaps = 28/209 (13%)
Query: 338 IGTGGFGEVFKGILDDGT-------VTAIKRAKLGNTKGTDLVLNEVRILCQVNHRSLVR 390
+G G FG V +G D + V +K L + D + EV + ++HR+L+R
Sbjct: 16 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 75
Query: 391 LLGCCVELDQTLMIYEYIPNGTLFDHLHCDFTGKWPPLPWHLRL----VIAHQIAEGLTY 446
L G + M+ E P G+L D L G H L A Q+AEG+ Y
Sbjct: 76 LYGVVLTPPMK-MVTELAPLGSLLDRLR-KHQG-------HFLLGTLSRYAVQVAEGMGY 126
Query: 447 LHSAAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDSHIFTTAQGTM--GY 504
L S HRD+ + N+LL + K+ DFGL R + + ND H + +
Sbjct: 127 LESKR---FIHRDLAARNLLLATRDLVKIGDFGLMRALPQ---NDDHXVMQEHRKVPFAW 180
Query: 505 LDPEYYRNFQLTDKSDVYSFGVVLLELLT 533
PE + + SD + FGV L E+ T
Sbjct: 181 CAPESLKTRTFSHASDTWMFGVTLWEMFT 209
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 68/234 (29%), Positives = 107/234 (45%), Gaps = 42/234 (17%)
Query: 331 NFSKDNL-----IGTGGFGEVFK----GILDDGT--VTAIKRAKLGNTKGTDLVL-NEVR 378
F +D L +G G FG+V + GI T A+K K G T L +E++
Sbjct: 23 EFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELK 82
Query: 379 ILCQVNHR-SLVRLLGCCVELDQTLMIY------------------EYIPNGTLFDHLHC 419
IL + H ++V LLG C + LM+ E++P + L+
Sbjct: 83 ILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYK 142
Query: 420 DFTGKWPPLPWHLRLVIAHQIAEGLTYLHSAAVPPIYHRDVKSSNILLDEKLNAKVSDFG 479
DF L + + Q+A+G+ +L S HRD+ + NILL EK K+ DFG
Sbjct: 143 DF------LTLEHLICYSFQVAKGMEFLASRKC---IHRDLAARNILLSEKNVVKICDFG 193
Query: 480 LSRLVERTETNDSHIFTTAQGTMGYLDPEYYRNFQLTDKSDVYSFGVVLLELLT 533
L+R + + D A+ + ++ PE + T +SDV+SFGV+L E+ +
Sbjct: 194 LARDIXKDP--DXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 245
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 63/236 (26%), Positives = 99/236 (41%), Gaps = 24/236 (10%)
Query: 322 GKEIRRATNNFSKDNLIGTGGFGEVF-------KGILDDGTVTAIKRAKLGNTKGTDLVL 374
K+ + A +F +G G FG V+ K IL + + +A+L +
Sbjct: 3 SKKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFIL---ALKVLFKAQLEKAGVEHQLR 59
Query: 375 NEVRILCQVNHRSLVRLLGCCVELDQTLMIYEYIPNGTLFDHLHCDFTGKWPPLPWHLRL 434
EV I + H +++RL G + + +I EY P GT++ L K
Sbjct: 60 REVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQ-----KLSKFDEQRTA 114
Query: 435 VIAHQIAEGLTYLHSAAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDSHI 494
++A L+Y HS V HRD+K N+LL K+++FG S +
Sbjct: 115 TYITELANALSYCHSKRV---IHRDIKPENLLLGSAGELKIANFGWSVHAPSSRR----- 166
Query: 495 FTTAQGTMGYLDPEYYRNFQLTDKSDVYSFGVVLLELLTSKKAIDFNREEENVNLV 550
TT GT+ YL PE +K D++S GV+ E L K + N +E +
Sbjct: 167 -TTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRI 221
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 65/208 (31%), Positives = 100/208 (48%), Gaps = 21/208 (10%)
Query: 338 IGTGGFGEV--FKGIL--DDGTVTAIKRAKLGNTKGTDLVLNEVRILCQVNHRSLVRLLG 393
IG G F +V + IL + V I + +L N+ + EVRI+ +NH ++V+L
Sbjct: 22 IGKGNFAKVKLARHILTGKEVAVKIIDKTQL-NSSSLQKLFREVRIMKVLNHPNIVKLFE 80
Query: 394 CCVELDQTL-MIYEYIPNGTLFDHLHCDFTGKWPPLPWHLRLVIAHQIAEGLTYLHSAAV 452
+E ++TL ++ EY G +FD+L K R QI + Y H
Sbjct: 81 V-IETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFR-----QIVSAVQYCHQKF- 133
Query: 453 PPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDSHIFTTAQGTMGYLDPEYYRN 512
I HRD+K+ N+LLD +N K++DFG S E T N F G+ Y PE ++
Sbjct: 134 --IVHRDLKAENLLLDADMNIKIADFGFSN--EFTFGNKLDTFC---GSPPYAAPELFQG 186
Query: 513 FQLTD-KSDVYSFGVVLLELLTSKKAID 539
+ + DV+S GV+L L++ D
Sbjct: 187 KKYDGPEVDVWSLGVILYTLVSGSLPFD 214
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/230 (26%), Positives = 95/230 (41%), Gaps = 24/230 (10%)
Query: 328 ATNNFSKDNLIGTGGFGEVF-------KGILDDGTVTAIKRAKLGNTKGTDLVLNEVRIL 380
A +F +G G FG V+ K IL + + +A+L + EV I
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFIL---ALKVLFKAQLEKAGVEHQLRREVEIQ 62
Query: 381 CQVNHRSLVRLLGCCVELDQTLMIYEYIPNGTLFDHLHCDFTGKWPPLPWHLRLVIAHQI 440
+ H +++RL G + + +I EY P GT++ L K ++
Sbjct: 63 SHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQ-----KLSKFDEQRTATYITEL 117
Query: 441 AEGLTYLHSAAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDSHIFTTAQG 500
A L+Y HS V HRD+K N+LL K++DFG S + T G
Sbjct: 118 ANALSYCHSKRV---IHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR------TXLCG 168
Query: 501 TMGYLDPEYYRNFQLTDKSDVYSFGVVLLELLTSKKAIDFNREEENVNLV 550
T+ YL PE +K D++S GV+ E L K + N +E +
Sbjct: 169 TLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRI 218
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/223 (27%), Positives = 101/223 (45%), Gaps = 26/223 (11%)
Query: 330 NNFSKDNLIGTGGFGEVFK----GILDDGTVTAIKRAKLGNTKGTD---LVLNEVRILCQ 382
NN +G G FG+V + G+ + V + L +T D +++E++I+
Sbjct: 46 NNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSH 105
Query: 383 V-NHRSLVRLLGCCVELDQTLMIYEYIPNGTLFDHLHCD---------FTGKWPPLPWHL 432
+ H ++V LLG C L+I EY G L + L F
Sbjct: 106 LGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRD 165
Query: 433 RLVIAHQIAEGLTYLHSAAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDS 492
L + Q+A+G+ +L S HRDV + N+LL AK+ DFGL+R + NDS
Sbjct: 166 LLHFSSQVAQGMAFLASKNC---IHRDVAARNVLLTNGHVAKIGDFGLARDI----MNDS 218
Query: 493 HIFTTAQGTM--GYLDPEYYRNFQLTDKSDVYSFGVVLLELLT 533
+ + ++ PE + T +SDV+S+G++L E+ +
Sbjct: 219 NYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 261
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/225 (27%), Positives = 106/225 (47%), Gaps = 16/225 (7%)
Query: 328 ATNNFSKDNLIGTGGFGEVFKGILD----DGTVTAIKRAKLGNT-KGTDLVLNEVRILCQ 382
A + + ++G G FGEV++G+ + A+K K T + ++E I+
Sbjct: 22 AREDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKN 81
Query: 383 VNHRSLVRLLGCCVELDQTLMIYEYIPNGTLFDHLHCDFTGKWPPLPWHLRLVIAHQIAE 442
++H +V+L+G +E + T +I E P G L +L + L ++ + QI +
Sbjct: 82 LDHPHIVKLIGI-IEEEPTWIIMELYPYGELGHYLERNKNS----LKVLTLVLYSLQICK 136
Query: 443 GLTYLHSAAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDSHIFTTAQGTM 502
+ YL S HRD+ NIL+ K+ DFGLSR + E D + + + +
Sbjct: 137 AMAYLESINC---VHRDIAVRNILVASPECVKLGDFGLSRYI---EDEDYYKASVTRLPI 190
Query: 503 GYLDPEYYRNFQLTDKSDVYSFGVVLLELLTSKKAIDFNREEENV 547
++ PE + T SDV+ F V + E+L+ K F E ++V
Sbjct: 191 KWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQPFFWLENKDV 235
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 68/234 (29%), Positives = 107/234 (45%), Gaps = 42/234 (17%)
Query: 331 NFSKDNL-----IGTGGFGEVFK----GILDDGT--VTAIKRAKLGNTKGTDLVL-NEVR 378
F +D L +G G FG+V + GI T A+K K G T L +E++
Sbjct: 14 EFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELK 73
Query: 379 ILCQVNHR-SLVRLLGCCVELDQTLMIY------------------EYIPNGTLFDHLHC 419
IL + H ++V LLG C + LM+ E++P + L+
Sbjct: 74 ILIHIGHHLNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYK 133
Query: 420 DFTGKWPPLPWHLRLVIAHQIAEGLTYLHSAAVPPIYHRDVKSSNILLDEKLNAKVSDFG 479
DF L + + Q+A+G+ +L S HRD+ + NILL EK K+ DFG
Sbjct: 134 DF------LTLEHLICYSFQVAKGMEFLASRKC---IHRDLAARNILLSEKNVVKICDFG 184
Query: 480 LSRLVERTETNDSHIFTTAQGTMGYLDPEYYRNFQLTDKSDVYSFGVVLLELLT 533
L+R + + D A+ + ++ PE + T +SDV+SFGV+L E+ +
Sbjct: 185 LARDIXKDP--DXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 236
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 65/208 (31%), Positives = 100/208 (48%), Gaps = 21/208 (10%)
Query: 338 IGTGGFGEV--FKGIL--DDGTVTAIKRAKLGNTKGTDLVLNEVRILCQVNHRSLVRLLG 393
IG G F +V + IL + V I + +L N+ + EVRI+ +NH ++V+L
Sbjct: 22 IGKGNFAKVKLARHILTGKEVAVKIIDKTQL-NSSSLQKLFREVRIMKVLNHPNIVKLFE 80
Query: 394 CCVELDQTL-MIYEYIPNGTLFDHLHCDFTGKWPPLPWHLRLVIAHQIAEGLTYLHSAAV 452
+E ++TL ++ EY G +FD+L K R QI + Y H
Sbjct: 81 V-IETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFR-----QIVSAVQYCHQKF- 133
Query: 453 PPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDSHIFTTAQGTMGYLDPEYYRN 512
I HRD+K+ N+LLD +N K++DFG S E T N F G+ Y PE ++
Sbjct: 134 --IVHRDLKAENLLLDADMNIKIADFGFSN--EFTFGNKLDTFC---GSPPYAAPELFQG 186
Query: 513 FQLTD-KSDVYSFGVVLLELLTSKKAID 539
+ + DV+S GV+L L++ D
Sbjct: 187 KKYDGPEVDVWSLGVILYTLVSGSLPFD 214
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 91/209 (43%), Gaps = 28/209 (13%)
Query: 338 IGTGGFGEVFKGILDDGT-------VTAIKRAKLGNTKGTDLVLNEVRILCQVNHRSLVR 390
+G G FG V +G D + V +K L + D + EV + ++HR+L+R
Sbjct: 26 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 85
Query: 391 LLGCCVELDQTLMIYEYIPNGTLFDHLHCDFTGKWPPLPWHLRL----VIAHQIAEGLTY 446
L G + M+ E P G+L D L G H L A Q+AEG+ Y
Sbjct: 86 LYGVVLTPPMK-MVTELAPLGSLLDRLR-KHQG-------HFLLGTLSRYAVQVAEGMGY 136
Query: 447 LHSAAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDSHIFTTAQGTM--GY 504
L S HRD+ + N+LL + K+ DFGL R + + ND H + +
Sbjct: 137 LESKR---FIHRDLAARNLLLATRDLVKIGDFGLMRALPQ---NDDHYVMQEHRKVPFAW 190
Query: 505 LDPEYYRNFQLTDKSDVYSFGVVLLELLT 533
PE + + SD + FGV L E+ T
Sbjct: 191 CAPESLKTRTFSHASDTWMFGVTLWEMFT 219
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 68/234 (29%), Positives = 107/234 (45%), Gaps = 42/234 (17%)
Query: 331 NFSKDNL-----IGTGGFGEVFK----GILDDGT--VTAIKRAKLGNTKGTDLVL-NEVR 378
F +D L +G G FG+V + GI T A+K K G T L +E++
Sbjct: 14 EFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELK 73
Query: 379 ILCQVNHR-SLVRLLGCCVELDQTLMIY------------------EYIPNGTLFDHLHC 419
IL + H ++V LLG C + LM+ E++P + L+
Sbjct: 74 ILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYK 133
Query: 420 DFTGKWPPLPWHLRLVIAHQIAEGLTYLHSAAVPPIYHRDVKSSNILLDEKLNAKVSDFG 479
DF L + + Q+A+G+ +L S HRD+ + NILL EK K+ DFG
Sbjct: 134 DF------LTLEHLICYSFQVAKGMEFLASRKC---IHRDLAARNILLSEKNVVKICDFG 184
Query: 480 LSRLVERTETNDSHIFTTAQGTMGYLDPEYYRNFQLTDKSDVYSFGVVLLELLT 533
L+R + + D A+ + ++ PE + T +SDV+SFGV+L E+ +
Sbjct: 185 LARDIXKDP--DXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 236
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 64/228 (28%), Positives = 106/228 (46%), Gaps = 26/228 (11%)
Query: 312 AAGKSARIFTGKEIRRATNNFSKDNLIGTGGFGEVF----KGILDDGTVTAIKRAKLGNT 367
++G+ F G ++ + + +G+G +GEV K + + IK++ + T
Sbjct: 8 SSGRENLYFQG-----LSDRYQRVKKLGSGAYGEVLLCKDKLTGAERAIKIIKKSSVTTT 62
Query: 368 KGTDLVLNEVRILCQVNHRSLVRLLGCCVELDQTLMIYEYIPNGTLFDHLHCDFTGKWPP 427
+ +L+EV +L Q++H ++++L + ++ E G LFD + K+
Sbjct: 63 SNSGALLDEVAVLKQLDHPNIMKLYEFFEDKRNYYLVMEVYRGGELFDEII--LRQKFSE 120
Query: 428 LPWHLRLVIAHQIAEGLTYLHSAAVPPIYHRDVKSSNILLDEKLN---AKVSDFGLSRLV 484
+ VI Q+ G TYLH I HRD+K N+LL+ K K+ DFGLS
Sbjct: 121 VD---AAVIMKQVLSGTTYLHKHN---IVHRDLKPENLLLESKSRDALIKIVDFGLSAHF 174
Query: 485 ERTETNDSHIFTTAQGTMGYLDPEYYRNFQLTDKSDVYSFGVVLLELL 532
E + GT Y+ PE R + +K DV+S GV+L LL
Sbjct: 175 EVGGKMKERL-----GTAYYIAPEVLRK-KYDEKCDVWSCGVILYILL 216
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 72/227 (31%), Positives = 109/227 (48%), Gaps = 29/227 (12%)
Query: 331 NFSKDNL-----IGTGGFGEVFK----GILDDGT--VTAIKRAKLGNTKGTDLVL-NEVR 378
F +D L +G G FG+V + GI T A+K K G T L +E++
Sbjct: 24 EFPRDRLNLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELK 83
Query: 379 ILCQVNHR-SLVRLLGCCVELDQTLM-IYEYIPNGTLFDHLHC---DFTG-KWPPLPWHL 432
IL + H ++V LLG C + LM I E+ G L +L +F K P +
Sbjct: 84 ILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTPEDLYKD 143
Query: 433 RLVIAH------QIAEGLTYLHSAAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVER 486
L + H Q+A+G+ +L S HRD+ + NILL EK K+ DFGL+R + +
Sbjct: 144 FLTLEHLICYSFQVAKGMEFLASRKC---IHRDLAARNILLSEKNVVKICDFGLARDIXK 200
Query: 487 TETNDSHIFTTAQGTMGYLDPEYYRNFQLTDKSDVYSFGVVLLELLT 533
D A+ + ++ PE + T +SDV+SFGV+L E+ +
Sbjct: 201 DP--DXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 245
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 66/228 (28%), Positives = 103/228 (45%), Gaps = 25/228 (10%)
Query: 312 AAGKSARIFTGKEIRRATNNFSKDNLIGTGGFGEVFKGIL----DDGTVTAIKRAKLGNT 367
A G S R + EI+R + IG G FG+V +GI + AIK K +
Sbjct: 2 AMGSSTRDY---EIQRERIELGR--CIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTS 56
Query: 368 KGT-DLVLNEVRILCQVNHRSLVRLLGCCVELDQTLMIYEYIPNGTLFDHLHCDFTGKWP 426
+ L E + Q +H +V+L+G E + +I E G L L +
Sbjct: 57 DSVREKFLQEALTMRQFDHPHIVKLIGVITE-NPVWIIMELCTLGELRSFLQV----RKY 111
Query: 427 PLPWHLRLVIAHQIAEGLTYLHSAAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVER 486
L ++ A+Q++ L YL S HRD+ + N+L+ K+ DFGLSR +E
Sbjct: 112 SLDLASLILYAYQLSTALAYLESKR---FVHRDIAARNVLVSSNDCVKLGDFGLSRYME- 167
Query: 487 TETNDSHIFTTAQGTM--GYLDPEYYRNFQLTDKSDVYSFGVVLLELL 532
DS + ++G + ++ PE + T SDV+ FGV + E+L
Sbjct: 168 ----DSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEIL 211
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 91/209 (43%), Gaps = 28/209 (13%)
Query: 338 IGTGGFGEVFKGILDDGT-------VTAIKRAKLGNTKGTDLVLNEVRILCQVNHRSLVR 390
+G G FG V +G D + V +K L + D + EV + ++HR+L+R
Sbjct: 16 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 75
Query: 391 LLGCCVELDQTLMIYEYIPNGTLFDHLHCDFTGKWPPLPWHLRL----VIAHQIAEGLTY 446
L G + M+ E P G+L D L G H L A Q+AEG+ Y
Sbjct: 76 LYGVVLTPPMK-MVTELAPLGSLLDRLR-KHQG-------HFLLGTLSRYAVQVAEGMGY 126
Query: 447 LHSAAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDSHIFTTAQGTM--GY 504
L S HRD+ + N+LL + K+ DFGL R + + ND H + +
Sbjct: 127 LESKR---FIHRDLAARNLLLATRDLVKIGDFGLMRALPQ---NDDHYVMQEHRKVPFAW 180
Query: 505 LDPEYYRNFQLTDKSDVYSFGVVLLELLT 533
PE + + SD + FGV L E+ T
Sbjct: 181 CAPESLKTRTFSHASDTWMFGVTLWEMFT 209
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/225 (27%), Positives = 106/225 (47%), Gaps = 16/225 (7%)
Query: 328 ATNNFSKDNLIGTGGFGEVFKGILD----DGTVTAIKRAKLGNT-KGTDLVLNEVRILCQ 382
A + + ++G G FGEV++G+ + A+K K T + ++E I+
Sbjct: 6 AREDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKN 65
Query: 383 VNHRSLVRLLGCCVELDQTLMIYEYIPNGTLFDHLHCDFTGKWPPLPWHLRLVIAHQIAE 442
++H +V+L+G +E + T +I E P G L +L + L ++ + QI +
Sbjct: 66 LDHPHIVKLIGI-IEEEPTWIIMELYPYGELGHYLERNKNS----LKVLTLVLYSLQICK 120
Query: 443 GLTYLHSAAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDSHIFTTAQGTM 502
+ YL S HRD+ NIL+ K+ DFGLSR + E D + + + +
Sbjct: 121 AMAYLESINC---VHRDIAVRNILVASPECVKLGDFGLSRYI---EDEDYYKASVTRLPI 174
Query: 503 GYLDPEYYRNFQLTDKSDVYSFGVVLLELLTSKKAIDFNREEENV 547
++ PE + T SDV+ F V + E+L+ K F E ++V
Sbjct: 175 KWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQPFFWLENKDV 219
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/231 (26%), Positives = 108/231 (46%), Gaps = 16/231 (6%)
Query: 322 GKEIRRATNNFSKDNLIGTGGFGEVFKGILD----DGTVTAIKRAKLGNT-KGTDLVLNE 376
G + A + + ++G G FGEV++G+ + A+K K T + ++E
Sbjct: 4 GPQYGIAREDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSE 63
Query: 377 VRILCQVNHRSLVRLLGCCVELDQTLMIYEYIPNGTLFDHLHCDFTGKWPPLPWHLRLVI 436
I+ ++H +V+L+G +E + T +I E P G L +L + L ++
Sbjct: 64 AVIMKNLDHPHIVKLIGI-IEEEPTWIIMELYPYGELGHYLERNKNS----LKVLTLVLY 118
Query: 437 AHQIAEGLTYLHSAAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDSHIFT 496
+ QI + + YL S HRD+ NIL+ K+ DFGLSR + E D + +
Sbjct: 119 SLQICKAMAYLESINC---VHRDIAVRNILVASPECVKLGDFGLSRYI---EDEDYYKAS 172
Query: 497 TAQGTMGYLDPEYYRNFQLTDKSDVYSFGVVLLELLTSKKAIDFNREEENV 547
+ + ++ PE + T SDV+ F V + E+L+ K F E ++V
Sbjct: 173 VTRLPIKWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQPFFWLENKDV 223
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 65/208 (31%), Positives = 100/208 (48%), Gaps = 21/208 (10%)
Query: 338 IGTGGFGEV--FKGIL--DDGTVTAIKRAKLGNTKGTDLVLNEVRILCQVNHRSLVRLLG 393
IG G F +V + IL + V I + +L N+ + EVRI+ +NH ++V+L
Sbjct: 22 IGKGNFAKVKLARHILTGKEVAVRIIDKTQL-NSSSLQKLFREVRIMKVLNHPNIVKLFE 80
Query: 394 CCVELDQTL-MIYEYIPNGTLFDHLHCDFTGKWPPLPWHLRLVIAHQIAEGLTYLHSAAV 452
+E ++TL ++ EY G +FD+L K R QI + Y H
Sbjct: 81 V-IETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFR-----QIVSAVQYCHQKF- 133
Query: 453 PPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDSHIFTTAQGTMGYLDPEYYRN 512
I HRD+K+ N+LLD +N K++DFG S E T N F G+ Y PE ++
Sbjct: 134 --IVHRDLKAENLLLDADMNIKIADFGFSN--EFTFGNKLDTFC---GSPPYAAPELFQG 186
Query: 513 FQLTD-KSDVYSFGVVLLELLTSKKAID 539
+ + DV+S GV+L L++ D
Sbjct: 187 KKYDGPEVDVWSLGVILYTLVSGSLPFD 214
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 68/229 (29%), Positives = 109/229 (47%), Gaps = 34/229 (14%)
Query: 330 NNFSKDNLIGTGGFGEVFKG-----ILDDGTVT-AIKRAK-LGNTKGTDLVLNEVRILCQ 382
N S +G G FG+V + I D +T A+K K + + +++E+++L
Sbjct: 39 NRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSY 98
Query: 383 V-NHRSLVRLLGCCVELDQTLMIYEYIPNGTLFDHLH-------CDFTGKWPPL------ 428
+ NH ++V LLG C TL+I EY G L + L C T P +
Sbjct: 99 LGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTS--PAIMEDDEL 156
Query: 429 --PWHLRLVIAHQIAEGLTYLHSAAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVER 486
L ++Q+A+G+ +L S HRD+ + NILL K+ DFGL+R ++
Sbjct: 157 ALDLEDLLSFSYQVAKGMAFLASKNC---IHRDLAARNILLTHGRITKICDFGLARDIK- 212
Query: 487 TETNDSHIFT--TAQGTMGYLDPEYYRNFQLTDKSDVYSFGVVLLELLT 533
NDS+ A+ + ++ PE N T +SDV+S+G+ L EL +
Sbjct: 213 ---NDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFS 258
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 68/229 (29%), Positives = 109/229 (47%), Gaps = 34/229 (14%)
Query: 330 NNFSKDNLIGTGGFGEVFKG-----ILDDGTVT-AIKRAK-LGNTKGTDLVLNEVRILCQ 382
N S +G G FG+V + I D +T A+K K + + +++E+++L
Sbjct: 46 NRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSY 105
Query: 383 V-NHRSLVRLLGCCVELDQTLMIYEYIPNGTLFDHLH-------CDFTGKWPPL------ 428
+ NH ++V LLG C TL+I EY G L + L C T P +
Sbjct: 106 LGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTS--PAIMEDDEL 163
Query: 429 --PWHLRLVIAHQIAEGLTYLHSAAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVER 486
L ++Q+A+G+ +L S HRD+ + NILL K+ DFGL+R ++
Sbjct: 164 ALDLEDLLSFSYQVAKGMAFLASKNC---IHRDLAARNILLTHGRITKICDFGLARHIK- 219
Query: 487 TETNDSHIFT--TAQGTMGYLDPEYYRNFQLTDKSDVYSFGVVLLELLT 533
NDS+ A+ + ++ PE N T +SDV+S+G+ L EL +
Sbjct: 220 ---NDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFS 265
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 91/209 (43%), Gaps = 28/209 (13%)
Query: 338 IGTGGFGEVFKGILDDGT-------VTAIKRAKLGNTKGTDLVLNEVRILCQVNHRSLVR 390
+G G FG V +G D + V +K L + D + EV + ++HR+L+R
Sbjct: 20 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 79
Query: 391 LLGCCVELDQTLMIYEYIPNGTLFDHLHCDFTGKWPPLPWHLRL----VIAHQIAEGLTY 446
L G + M+ E P G+L D L G H L A Q+AEG+ Y
Sbjct: 80 LYGVVLTPPMK-MVTELAPLGSLLDRLR-KHQG-------HFLLGTLSRYAVQVAEGMGY 130
Query: 447 LHSAAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDSHIFTTAQGTM--GY 504
L S HRD+ + N+LL + K+ DFGL R + + ND H + +
Sbjct: 131 LESKR---FIHRDLAARNLLLATRDLVKIGDFGLMRALPQ---NDDHYVMQEHRKVPFAW 184
Query: 505 LDPEYYRNFQLTDKSDVYSFGVVLLELLT 533
PE + + SD + FGV L E+ T
Sbjct: 185 CAPESLKTRTFSHASDTWMFGVTLWEMFT 213
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 91/209 (43%), Gaps = 28/209 (13%)
Query: 338 IGTGGFGEVFKGILDDGT-------VTAIKRAKLGNTKGTDLVLNEVRILCQVNHRSLVR 390
+G G FG V +G D + V +K L + D + EV + ++HR+L+R
Sbjct: 16 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 75
Query: 391 LLGCCVELDQTLMIYEYIPNGTLFDHLHCDFTGKWPPLPWHLRL----VIAHQIAEGLTY 446
L G + M+ E P G+L D L G H L A Q+AEG+ Y
Sbjct: 76 LYGVVLTPPMK-MVTELAPLGSLLDRLR-KHQG-------HFLLGTLSRYAVQVAEGMGY 126
Query: 447 LHSAAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDSHIFTTAQGTM--GY 504
L S HRD+ + N+LL + K+ DFGL R + + ND H + +
Sbjct: 127 LESKR---FIHRDLAARNLLLATRDLVKIGDFGLMRALPQ---NDDHYVMQEHRKVPFAW 180
Query: 505 LDPEYYRNFQLTDKSDVYSFGVVLLELLT 533
PE + + SD + FGV L E+ T
Sbjct: 181 CAPESLKTRTFSHASDTWMFGVTLWEMFT 209
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/230 (26%), Positives = 97/230 (42%), Gaps = 24/230 (10%)
Query: 328 ATNNFSKDNLIGTGGFGEVF-------KGILDDGTVTAIKRAKLGNTKGTDLVLNEVRIL 380
A +F +G G FG V+ K IL + + +A+L + EV I
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFIL---ALKVLFKAQLEKAGVEHQLRREVEIQ 65
Query: 381 CQVNHRSLVRLLGCCVELDQTLMIYEYIPNGTLFDHLHCDFTGKWPPLPWHLRLVIAHQI 440
+ H +++RL G + + +I EY P GT++ L K ++
Sbjct: 66 SHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQ-----KLSKFDEQRTATYITEL 120
Query: 441 AEGLTYLHSAAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDSHIFTTAQG 500
A L+Y HS V HRD+K N+LL K++DFG S V + + + G
Sbjct: 121 ANALSYCHSKRV---IHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRAALC----G 171
Query: 501 TMGYLDPEYYRNFQLTDKSDVYSFGVVLLELLTSKKAIDFNREEENVNLV 550
T+ YL PE +K D++S GV+ E L K + N +E +
Sbjct: 172 TLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRI 221
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/207 (29%), Positives = 99/207 (47%), Gaps = 17/207 (8%)
Query: 335 DNLIGTGGFGEVFKGILDDGTVTAIKRA-----KLGNTKGTDLVLNEVRILCQVNHRSLV 389
D +IG G FG V+ G D I+ A ++ + + L E ++ +NH +++
Sbjct: 26 DRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPNVL 85
Query: 390 RLLGCCVE---LDQTLMIYEYIPNGTLFDHLHCDFTGKWPPLPWHLRLVIAHQIAEGLTY 446
L+G + L L+ Y+ +G L + + + P L + Q+A G+ Y
Sbjct: 86 ALIGIMLPPEGLPHVLL--PYMCHGDLLQFIR---SPQRNPTVKDL-ISFGLQVARGMEY 139
Query: 447 LHSAAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDSHIFTTAQGTMGYLD 506
L A HRD+ + N +LDE KV+DFGL+R + E A+ + +
Sbjct: 140 L---AEQKFVHRDLAARNCMLDESFTVKVADFGLARDILDREYYSVQQHRHARLPVKWTA 196
Query: 507 PEYYRNFQLTDKSDVYSFGVVLLELLT 533
E + ++ T KSDV+SFGV+L ELLT
Sbjct: 197 LESLQTYRFTTKSDVWSFGVLLWELLT 223
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/201 (28%), Positives = 94/201 (46%), Gaps = 12/201 (5%)
Query: 338 IGTGGFGEVFK-GILDDGTVTAIKRAKLGNTKGTD--LVLNEVRILCQVNHRSLVRLLGC 394
IGTG +G K DG + K G+ + ++++EV +L ++ H ++VR
Sbjct: 14 IGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDR 73
Query: 395 CVELDQTLM--IYEYIPNGTLFDHLHCDFTGKWPPLPWHLRLVIAHQIAEGLTYLH--SA 450
++ T + + EY G L + T + L L + Q+ L H S
Sbjct: 74 IIDRTNTTLYIVMEYCEGGDLASVI-TKGTKERQYLDEEFVLRVMTQLTLALKECHRRSD 132
Query: 451 AVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDSHIFTTAQGTMGYLDPEYY 510
+ HRD+K +N+ LD K N K+ DFGL+R++ +D+ T GT Y+ PE
Sbjct: 133 GGHTVLHRDLKPANVFLDGKQNVKLGDFGLARIL----NHDTSFAKTFVGTPYYMSPEQM 188
Query: 511 RNFQLTDKSDVYSFGVVLLEL 531
+KSD++S G +L EL
Sbjct: 189 NRMSYNEKSDIWSLGCLLYEL 209
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 68/234 (29%), Positives = 107/234 (45%), Gaps = 42/234 (17%)
Query: 331 NFSKDNL-----IGTGGFGEVFK----GILDDGT--VTAIKRAKLGNTKGTDLVL-NEVR 378
F +D L +G G FG+V + GI T A+K K G T L +E++
Sbjct: 23 EFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELK 82
Query: 379 ILCQVNHR-SLVRLLGCCVELDQTLMIY------------------EYIPNGTLFDHLHC 419
IL + H ++V LLG C + LM+ E++P + L+
Sbjct: 83 ILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYK 142
Query: 420 DFTGKWPPLPWHLRLVIAHQIAEGLTYLHSAAVPPIYHRDVKSSNILLDEKLNAKVSDFG 479
DF L + + Q+A+G+ +L S HRD+ + NILL EK K+ DFG
Sbjct: 143 DF------LTLEHLICYSFQVAKGMEFLASRKC---IHRDLAARNILLSEKNVVKICDFG 193
Query: 480 LSRLVERTETNDSHIFTTAQGTMGYLDPEYYRNFQLTDKSDVYSFGVVLLELLT 533
L+R + + D A+ + ++ PE + T +SDV+SFGV+L E+ +
Sbjct: 194 LARDIYKDP--DXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 245
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 94/227 (41%), Gaps = 18/227 (7%)
Query: 328 ATNNFSKDNLIGTGGFGEVFKGILDDGT-VTAIK---RAKLGNTKGTDLVLNEVRILCQV 383
A +F +G G FG V+ + A+K +A+L + EV I +
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 384 NHRSLVRLLGCCVELDQTLMIYEYIPNGTLFDHLHCDFTGKWPPLPWHLRLVIAHQIAEG 443
H +++RL G + + +I EY P G ++ L K ++A
Sbjct: 71 RHPNILRLYGYFHDATRVYLILEYAPRGEVYKELQ-----KLSKFDEQRTATYITELANA 125
Query: 444 LTYLHSAAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDSHIFTTAQGTMG 503
L+Y HS V HRD+K N+LL K++DFG S V + + GT+
Sbjct: 126 LSYCHSKRV---IHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRXXL----XGTLD 176
Query: 504 YLDPEYYRNFQLTDKSDVYSFGVVLLELLTSKKAIDFNREEENVNLV 550
YL PE +K D++S GV+ E L K + N +E +
Sbjct: 177 YLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRI 223
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 65/208 (31%), Positives = 99/208 (47%), Gaps = 21/208 (10%)
Query: 338 IGTGGFGEV--FKGIL--DDGTVTAIKRAKLGNTKGTDLVLNEVRILCQVNHRSLVRLLG 393
IG G F +V + IL + V I + +L N+ + EVRI+ +NH ++V+L
Sbjct: 22 IGKGNFAKVKLARHILTGKEVAVKIIDKTQL-NSSSLQKLFREVRIMKVLNHPNIVKLFE 80
Query: 394 CCVELDQTL-MIYEYIPNGTLFDHLHCDFTGKWPPLPWHLRLVIAHQIAEGLTYLHSAAV 452
+E ++TL ++ EY G +FD+L K R QI + Y H
Sbjct: 81 V-IETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFR-----QIVSAVQYCHQKF- 133
Query: 453 PPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDSHIFTTAQGTMGYLDPEYYRN 512
I HRD+K+ N+LLD +N K++DFG S E T N F G Y PE ++
Sbjct: 134 --IVHRDLKAENLLLDADMNIKIADFGFSN--EFTFGNKLDAFC---GAPPYAAPELFQG 186
Query: 513 FQLTD-KSDVYSFGVVLLELLTSKKAID 539
+ + DV+S GV+L L++ D
Sbjct: 187 KKYDGPEVDVWSLGVILYTLVSGSLPFD 214
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 68/234 (29%), Positives = 107/234 (45%), Gaps = 42/234 (17%)
Query: 331 NFSKDNL-----IGTGGFGEVFK----GILDDGT--VTAIKRAKLGNTKGTDLVL-NEVR 378
F +D L +G G FG+V + GI T A+K K G T L +E++
Sbjct: 23 EFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELK 82
Query: 379 ILCQVNHR-SLVRLLGCCVELDQTLMIY------------------EYIPNGTLFDHLHC 419
IL + H ++V LLG C + LM+ E++P + L+
Sbjct: 83 ILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYK 142
Query: 420 DFTGKWPPLPWHLRLVIAHQIAEGLTYLHSAAVPPIYHRDVKSSNILLDEKLNAKVSDFG 479
DF L + + Q+A+G+ +L S HRD+ + NILL EK K+ DFG
Sbjct: 143 DF------LTLEHLICYSFQVAKGMEFLASRKC---IHRDLAARNILLSEKNVVKICDFG 193
Query: 480 LSRLVERTETNDSHIFTTAQGTMGYLDPEYYRNFQLTDKSDVYSFGVVLLELLT 533
L+R + + D A+ + ++ PE + T +SDV+SFGV+L E+ +
Sbjct: 194 LARDIYKDP--DYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 245
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 99/203 (48%), Gaps = 15/203 (7%)
Query: 338 IGTGGFGEV----FKGILDD-GTVTAIKRAKLGNTKGTDLVLNEVRILCQVNHRSLVRLL 392
+G G FG V + + D+ G + A+K+ + E++IL ++ +V+
Sbjct: 15 LGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYR 74
Query: 393 GCCVE--LDQTLMIYEYIPNGTLFDHLHCDFTGKWPPLPWHLRLVIAHQIAEGLTYLHSA 450
G + ++ EY+P+G L D L L L+ + QI +G+ YL S
Sbjct: 75 GVSYGPGRPELRLVMEYLPSGCLRDFLQRHRAR----LDASRLLLYSSQICKGMEYLGSR 130
Query: 451 AVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDSHIFTTAQGTMGYLDPEYY 510
HRD+ + NIL++ + + K++DFGL++L+ + + + Q + + PE
Sbjct: 131 RC---VHRDLAARNILVESEAHVKIADFGLAKLLP-LDKDXXVVREPGQSPIFWYAPESL 186
Query: 511 RNFQLTDKSDVYSFGVVLLELLT 533
+ + +SDV+SFGVVL EL T
Sbjct: 187 SDNIFSRQSDVWSFGVVLYELFT 209
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 68/229 (29%), Positives = 109/229 (47%), Gaps = 34/229 (14%)
Query: 330 NNFSKDNLIGTGGFGEVFKG-----ILDDGTVT-AIKRAK-LGNTKGTDLVLNEVRILCQ 382
N S +G G FG+V + I D +T A+K K + + +++E+++L
Sbjct: 46 NRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSY 105
Query: 383 V-NHRSLVRLLGCCVELDQTLMIYEYIPNGTLFDHLH-------CDFTGKWPPL------ 428
+ NH ++V LLG C TL+I EY G L + L C T P +
Sbjct: 106 LGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTS--PAIMEDDEL 163
Query: 429 --PWHLRLVIAHQIAEGLTYLHSAAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVER 486
L ++Q+A+G+ +L S HRD+ + NILL K+ DFGL+R ++
Sbjct: 164 ALDLEDLLSFSYQVAKGMAFLASKNC---IHRDLAARNILLTHGRITKICDFGLARDIK- 219
Query: 487 TETNDSHIFT--TAQGTMGYLDPEYYRNFQLTDKSDVYSFGVVLLELLT 533
NDS+ A+ + ++ PE N T +SDV+S+G+ L EL +
Sbjct: 220 ---NDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFS 265
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/207 (30%), Positives = 98/207 (47%), Gaps = 21/207 (10%)
Query: 330 NNFSKDNLIGTGGFGEV-FKGILDDGTVTAIK---RAKLGNTKGTDLVLNEVRILCQVNH 385
+ F + +GTG FG V ++ G A+K + K+ K + LNE RIL VN
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 386 RSLVRLLGCCVELDQTLMIYEYIPNGTLFDHLHCDFTGKWPPLPWHLRLVIAHQIAEGLT 445
LV+L + M+ EY P G +F HL G++ P H R A QI
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRR--IGRFSE-P-HARFYAA-QIVLTFE 155
Query: 446 YLHSAAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVE-RTETNDSHIFTTAQGTMGY 504
YLHS + +RD+K N+++D++ +V+DFG ++ V+ RT GT Y
Sbjct: 156 YLHSL---DLIYRDLKPENLMIDQQGYIQVTDFGFAKRVKGRT--------WXLCGTPEY 204
Query: 505 LDPEYYRNFQLTDKSDVYSFGVVLLEL 531
L PE + D ++ GV++ E+
Sbjct: 205 LAPEIILSKGYNKAVDWWALGVLIYEM 231
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 68/229 (29%), Positives = 109/229 (47%), Gaps = 34/229 (14%)
Query: 330 NNFSKDNLIGTGGFGEVFKG-----ILDDGTVT-AIKRAK-LGNTKGTDLVLNEVRILCQ 382
N S +G G FG+V + I D +T A+K K + + +++E+++L
Sbjct: 41 NRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSY 100
Query: 383 V-NHRSLVRLLGCCVELDQTLMIYEYIPNGTLFDHLH-------CDFTGKWPPL------ 428
+ NH ++V LLG C TL+I EY G L + L C T P +
Sbjct: 101 LGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTS--PAIMEDDEL 158
Query: 429 --PWHLRLVIAHQIAEGLTYLHSAAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVER 486
L ++Q+A+G+ +L S HRD+ + NILL K+ DFGL+R ++
Sbjct: 159 ALDLEDLLSFSYQVAKGMAFLASKNC---IHRDLAARNILLTHGRITKICDFGLARDIK- 214
Query: 487 TETNDSHIFT--TAQGTMGYLDPEYYRNFQLTDKSDVYSFGVVLLELLT 533
NDS+ A+ + ++ PE N T +SDV+S+G+ L EL +
Sbjct: 215 ---NDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFS 260
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/203 (29%), Positives = 94/203 (46%), Gaps = 22/203 (10%)
Query: 338 IGTGGFGEVFKGIL----DDGTVTAIKRAKLGNTKGT-DLVLNEVRILCQVNHRSLVRLL 392
IG G FG+V +GI + AIK K + + L E + Q +H +V+L+
Sbjct: 18 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 77
Query: 393 GCCVELDQTLMIYEYIPNGTLFDHLHC-DFTGKWPPLPWHLRLVIAHQIAEGLTYLHSAA 451
G E + +I E G L L F+ L ++ A+Q++ L YL S
Sbjct: 78 GVITE-NPVWIIMELCTLGELRSFLQVRKFSLDLASL-----ILYAYQLSTALAYLESKR 131
Query: 452 VPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDSHIFTTAQGTM--GYLDPEY 509
HRD+ + N+L+ K+ DFGLSR +E DS + ++G + ++ PE
Sbjct: 132 ---FVHRDIAARNVLVSATDCVKLGDFGLSRYME-----DSTYYKASKGKLPIKWMAPES 183
Query: 510 YRNFQLTDKSDVYSFGVVLLELL 532
+ T SDV+ FGV + E+L
Sbjct: 184 INFRRFTSASDVWMFGVCMWEIL 206
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 68/234 (29%), Positives = 107/234 (45%), Gaps = 42/234 (17%)
Query: 331 NFSKDNL-----IGTGGFGEVFK----GILDDGT--VTAIKRAKLGNTKGTDLVL-NEVR 378
F +D L +G G FG+V + GI T A+K K G T L +E++
Sbjct: 14 EFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELK 73
Query: 379 ILCQVNHR-SLVRLLGCCVELDQTLMIY------------------EYIPNGTLFDHLHC 419
IL + H ++V LLG C + LM+ E++P + L+
Sbjct: 74 ILIHIGHHLNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYK 133
Query: 420 DFTGKWPPLPWHLRLVIAHQIAEGLTYLHSAAVPPIYHRDVKSSNILLDEKLNAKVSDFG 479
DF L + + Q+A+G+ +L S HRD+ + NILL EK K+ DFG
Sbjct: 134 DF------LTLEHLICYSFQVAKGMEFLASRKC---IHRDLAARNILLSEKNVVKICDFG 184
Query: 480 LSRLVERTETNDSHIFTTAQGTMGYLDPEYYRNFQLTDKSDVYSFGVVLLELLT 533
L+R + + D A+ + ++ PE + T +SDV+SFGV+L E+ +
Sbjct: 185 LARDIYKDP--DYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 236
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 68/234 (29%), Positives = 107/234 (45%), Gaps = 42/234 (17%)
Query: 331 NFSKDNL-----IGTGGFGEVFK----GILDDGT--VTAIKRAKLGNTKGTDLVL-NEVR 378
F +D L +G G FG+V + GI T A+K K G T L +E++
Sbjct: 60 EFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELK 119
Query: 379 ILCQVNHR-SLVRLLGCCVELDQTLMIY------------------EYIPNGTLFDHLHC 419
IL + H ++V LLG C + LM+ E++P + L+
Sbjct: 120 ILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYK 179
Query: 420 DFTGKWPPLPWHLRLVIAHQIAEGLTYLHSAAVPPIYHRDVKSSNILLDEKLNAKVSDFG 479
DF L + + Q+A+G+ +L S HRD+ + NILL EK K+ DFG
Sbjct: 180 DF------LTLEHLICYSFQVAKGMEFLASRKC---IHRDLAARNILLSEKNVVKICDFG 230
Query: 480 LSRLVERTETNDSHIFTTAQGTMGYLDPEYYRNFQLTDKSDVYSFGVVLLELLT 533
L+R + + D A+ + ++ PE + T +SDV+SFGV+L E+ +
Sbjct: 231 LARDIYKDP--DYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 282
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 96/211 (45%), Gaps = 25/211 (11%)
Query: 338 IGTGGFGEVFKGIL----DDGTVTAIKRAKLG--NTKGTDLVLNEVRILCQVNHRSLVRL 391
IG G FG K IL +DG IK + ++K + EV +L + H ++V+
Sbjct: 32 IGEGSFG---KAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHPNIVQY 88
Query: 392 LGCCVELDQTLMIYEYIPNGTLFDHLHCD---FTGKWPPLPWHLRLVIAHQIAEGLTYLH 448
E ++ +Y G LF ++ + L W +++ +A L ++H
Sbjct: 89 RESFEENGSLYIVMDYCEGGDLFKRINAQKGVLFQEDQILDWFVQICLA------LKHVH 142
Query: 449 SAAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDSHIFTTAQGTMGYLDPE 508
I HRD+KS NI L + ++ DFG++R++ T + GT YL PE
Sbjct: 143 DRK---ILHRDIKSQNIFLTKDGTVQLGDFGIARVLNST----VELARACIGTPYYLSPE 195
Query: 509 YYRNFQLTDKSDVYSFGVVLLELLTSKKAID 539
N +KSD+++ G VL EL T K A +
Sbjct: 196 ICENKPYNNKSDIWALGCVLYELCTLKHAFE 226
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 66/215 (30%), Positives = 101/215 (46%), Gaps = 21/215 (9%)
Query: 331 NFSKDNLIGTGGFGEV--FKGILD--DGTVTAIKRAKLGNTKGTDLVLNEVRILCQVNHR 386
N+ IG G F +V + +L + V I + +L T L EVRI+ +NH
Sbjct: 16 NYRLQKTIGKGNFAKVKLARHVLTGREVAVKIIDKTQLNPTSLQKL-FREVRIMKILNHP 74
Query: 387 SLVRLLGCCVELDQTL-MIYEYIPNGTLFDHLHCDFTGKWPPLPWHLRLVIAHQIAEGLT 445
++V+L +E ++TL ++ EY G +FD+L K R QI +
Sbjct: 75 NIVKLFEV-IETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFR-----QIVSAVQ 128
Query: 446 YLHSAAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDSHIFTTAQGTMGYL 505
Y H I HRD+K+ N+LLD +N K++DFG S E T N F G+ Y
Sbjct: 129 YCHQKY---IVHRDLKAENLLLDGDMNIKIADFGFSN--EFTVGNKLDTFC---GSPPYA 180
Query: 506 DPEYYRNFQLTD-KSDVYSFGVVLLELLTSKKAID 539
PE ++ + + DV+S GV+L L++ D
Sbjct: 181 APELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFD 215
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 68/229 (29%), Positives = 109/229 (47%), Gaps = 34/229 (14%)
Query: 330 NNFSKDNLIGTGGFGEVFKG-----ILDDGTVT-AIKRAK-LGNTKGTDLVLNEVRILCQ 382
N S +G G FG+V + I D +T A+K K + + +++E+++L
Sbjct: 23 NRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSY 82
Query: 383 V-NHRSLVRLLGCCVELDQTLMIYEYIPNGTLFDHLH-------CDFTGKWPPL------ 428
+ NH ++V LLG C TL+I EY G L + L C T P +
Sbjct: 83 LGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTS--PAIMEDDEL 140
Query: 429 --PWHLRLVIAHQIAEGLTYLHSAAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVER 486
L ++Q+A+G+ +L S HRD+ + NILL K+ DFGL+R ++
Sbjct: 141 ALDLEDLLSFSYQVAKGMAFLASKNC---IHRDLAARNILLTHGRITKICDFGLARDIK- 196
Query: 487 TETNDSHIFT--TAQGTMGYLDPEYYRNFQLTDKSDVYSFGVVLLELLT 533
NDS+ A+ + ++ PE N T +SDV+S+G+ L EL +
Sbjct: 197 ---NDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFS 242
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Phosphopeptide
Length = 306
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 100/209 (47%), Gaps = 19/209 (9%)
Query: 338 IGTGGFGEVFKGILDD------GTVTAIKRA-KLGNTKGTDLVLNEVRILCQVNHRSLVR 390
+G G FG V++G D T A+K + + + LNE ++ +VR
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 84
Query: 391 LLGCCVELDQTLMIYEYIPNGTLFDHLHC------DFTGKWPPLPWHLRLVIAHQIAEGL 444
LLG + TL++ E + +G L +L + G+ PP + + +A +IA+G+
Sbjct: 85 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEM-IQMAAEIADGM 143
Query: 445 TYLHSAAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDSHIFTTAQGTMGY 504
YL++ HRD+ + N ++ K+ DFG++R + ET+ + +
Sbjct: 144 AYLNAKK---FVHRDLAARNCMVAHDFTVKIGDFGMTRDI--XETDXXRKGGKGLLPVRW 198
Query: 505 LDPEYYRNFQLTDKSDVYSFGVVLLELLT 533
+ PE ++ T SD++SFGVVL E+ +
Sbjct: 199 MAPESLKDGVFTTSSDMWSFGVVLWEITS 227
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 100/209 (47%), Gaps = 19/209 (9%)
Query: 338 IGTGGFGEVFKGILDD------GTVTAIKRA-KLGNTKGTDLVLNEVRILCQVNHRSLVR 390
+G G FG V++G D T A+K + + + LNE ++ +VR
Sbjct: 22 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 81
Query: 391 LLGCCVELDQTLMIYEYIPNGTLFDHLHC------DFTGKWPPLPWHLRLVIAHQIAEGL 444
LLG + TL++ E + +G L +L + G+ PP + + +A +IA+G+
Sbjct: 82 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEM-IQMAAEIADGM 140
Query: 445 TYLHSAAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDSHIFTTAQGTMGY 504
YL++ HRD+ + N ++ K+ DFG++R + ET+ + +
Sbjct: 141 AYLNAKK---FVHRDLAARNCMVAHDFTVKIGDFGMTRDI--XETDXXRKGGKGLLPVRW 195
Query: 505 LDPEYYRNFQLTDKSDVYSFGVVLLELLT 533
+ PE ++ T SD++SFGVVL E+ +
Sbjct: 196 MAPESLKDGVFTTSSDMWSFGVVLWEITS 224
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/207 (30%), Positives = 97/207 (46%), Gaps = 21/207 (10%)
Query: 330 NNFSKDNLIGTGGFGEV-FKGILDDGTVTAIK---RAKLGNTKGTDLVLNEVRILCQVNH 385
+ F + +GTG FG V ++ G A+K + K+ K + LNE RIL VN
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 101
Query: 386 RSLVRLLGCCVELDQTLMIYEYIPNGTLFDHLHCDFTGKWPPLPWHLRLVIAHQIAEGLT 445
L +L + M+ EY P G +F HL G++ P H R A QI
Sbjct: 102 PFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRR--IGRFSE-P-HARFYAA-QIVLTFE 156
Query: 446 YLHSAAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVE-RTETNDSHIFTTAQGTMGY 504
YLHS + +RD+K N+++D++ KV+DFG ++ V+ RT GT Y
Sbjct: 157 YLHSL---DLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRT--------WXLCGTPEY 205
Query: 505 LDPEYYRNFQLTDKSDVYSFGVVLLEL 531
L PE + D ++ GV++ E+
Sbjct: 206 LAPEIILSKGYNKAVDWWALGVLIYEM 232
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 65/208 (31%), Positives = 100/208 (48%), Gaps = 21/208 (10%)
Query: 338 IGTGGFGEV--FKGIL--DDGTVTAIKRAKLGNTKGTDLVLNEVRILCQVNHRSLVRLLG 393
IG G F +V + IL + V I + +L N+ + EVRI+ +NH ++V+L
Sbjct: 15 IGKGNFAKVKLARHILTGKEVAVKIIDKTQL-NSSSLQKLFREVRIMKVLNHPNIVKLFE 73
Query: 394 CCVELDQTL-MIYEYIPNGTLFDHLHCDFTGKWPPLPWHLRLVIAHQIAEGLTYLHSAAV 452
+E ++TL ++ EY G +FD+L K R QI + Y H
Sbjct: 74 V-IETEKTLYLVMEYASGGEVFDYLVAHGWMKEKEARAKFR-----QIVSAVQYCHQKF- 126
Query: 453 PPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDSHIFTTAQGTMGYLDPEYYRN 512
I HRD+K+ N+LLD +N K++DFG S E T N F G+ Y PE ++
Sbjct: 127 --IVHRDLKAENLLLDADMNIKIADFGFSN--EFTFGNKLDTFC---GSPPYAAPELFQG 179
Query: 513 FQLTD-KSDVYSFGVVLLELLTSKKAID 539
+ + DV+S GV+L L++ D
Sbjct: 180 KKYDGPEVDVWSLGVILYTLVSGSLPFD 207
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/230 (26%), Positives = 97/230 (42%), Gaps = 24/230 (10%)
Query: 328 ATNNFSKDNLIGTGGFGEVF-------KGILDDGTVTAIKRAKLGNTKGTDLVLNEVRIL 380
A +F +G G FG V+ K IL + + +A+L + EV I
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFIL---ALKVLFKAQLEKAGVEHQLRREVEIQ 62
Query: 381 CQVNHRSLVRLLGCCVELDQTLMIYEYIPNGTLFDHLHCDFTGKWPPLPWHLRLVIAHQI 440
+ H +++RL G + + +I EY P GT++ L K ++
Sbjct: 63 SHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQ-----KLSKFDEQRTATYITEL 117
Query: 441 AEGLTYLHSAAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDSHIFTTAQG 500
A L+Y HS V HRD+K N+LL K++DFG S V + + + G
Sbjct: 118 ANALSYCHSKRV---IHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRAALC----G 168
Query: 501 TMGYLDPEYYRNFQLTDKSDVYSFGVVLLELLTSKKAIDFNREEENVNLV 550
T+ YL PE +K D++S GV+ E L K + N +E +
Sbjct: 169 TLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRI 218
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 100/209 (47%), Gaps = 19/209 (9%)
Query: 338 IGTGGFGEVFKGILDD------GTVTAIKRA-KLGNTKGTDLVLNEVRILCQVNHRSLVR 390
+G G FG V++G D T A+K + + + LNE ++ +VR
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 84
Query: 391 LLGCCVELDQTLMIYEYIPNGTLFDHLHC------DFTGKWPPLPWHLRLVIAHQIAEGL 444
LLG + TL++ E + +G L +L + G+ PP + + +A +IA+G+
Sbjct: 85 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEM-IQMAAEIADGM 143
Query: 445 TYLHSAAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDSHIFTTAQGTMGY 504
YL++ HRD+ + N ++ K+ DFG++R + ET+ + +
Sbjct: 144 AYLNAKK---FVHRDLAARNCMVAHDFTVKIGDFGMTRDI--XETDXXRKGGKGLLPVRW 198
Query: 505 LDPEYYRNFQLTDKSDVYSFGVVLLELLT 533
+ PE ++ T SD++SFGVVL E+ +
Sbjct: 199 MAPESLKDGVFTTSSDMWSFGVVLWEITS 227
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 68/234 (29%), Positives = 107/234 (45%), Gaps = 42/234 (17%)
Query: 331 NFSKDNL-----IGTGGFGEVFK----GILDDGT--VTAIKRAKLGNTKGTDLVL-NEVR 378
F +D L +G G FG+V + GI T A+K K G T L +E++
Sbjct: 14 EFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELK 73
Query: 379 ILCQVNHR-SLVRLLGCCVELDQTLMIY------------------EYIPNGTLFDHLHC 419
IL + H ++V LLG C + LM+ E++P + L+
Sbjct: 74 ILIHIGHHLNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYK 133
Query: 420 DFTGKWPPLPWHLRLVIAHQIAEGLTYLHSAAVPPIYHRDVKSSNILLDEKLNAKVSDFG 479
DF L + + Q+A+G+ +L S HRD+ + NILL EK K+ DFG
Sbjct: 134 DF------LTLEHLICYSFQVAKGMEFLASRKC---IHRDLAARNILLSEKNVVKICDFG 184
Query: 480 LSRLVERTETNDSHIFTTAQGTMGYLDPEYYRNFQLTDKSDVYSFGVVLLELLT 533
L+R + + D A+ + ++ PE + T +SDV+SFGV+L E+ +
Sbjct: 185 LARDIYKDP--DYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 236
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/207 (30%), Positives = 97/207 (46%), Gaps = 21/207 (10%)
Query: 330 NNFSKDNLIGTGGFGEV-FKGILDDGTVTAIK---RAKLGNTKGTDLVLNEVRILCQVNH 385
+ F + +GTG FG V ++ G A+K + K+ K + LNE RIL VN
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 101
Query: 386 RSLVRLLGCCVELDQTLMIYEYIPNGTLFDHLHCDFTGKWPPLPWHLRLVIAHQIAEGLT 445
L +L + M+ EY P G +F HL G++ P H R A QI
Sbjct: 102 PFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRR--IGRFSE-P-HARFYAA-QIVLTFE 156
Query: 446 YLHSAAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVE-RTETNDSHIFTTAQGTMGY 504
YLHS + +RD+K N+++D++ KV+DFG ++ V+ RT GT Y
Sbjct: 157 YLHSL---DLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRT--------WXLCGTPEY 205
Query: 505 LDPEYYRNFQLTDKSDVYSFGVVLLEL 531
L PE + D ++ GV++ E+
Sbjct: 206 LAPEIILSKGYNKAVDWWALGVLIYEM 232
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 68/234 (29%), Positives = 107/234 (45%), Gaps = 42/234 (17%)
Query: 331 NFSKDNL-----IGTGGFGEVFK----GILDDGT--VTAIKRAKLGNTKGTDLVL-NEVR 378
F +D L +G G FG+V + GI T A+K K G T L +E++
Sbjct: 25 EFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELK 84
Query: 379 ILCQVNHR-SLVRLLGCCVELDQTLMIY------------------EYIPNGTLFDHLHC 419
IL + H ++V LLG C + LM+ E++P + L+
Sbjct: 85 ILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKEAPEDLYK 144
Query: 420 DFTGKWPPLPWHLRLVIAHQIAEGLTYLHSAAVPPIYHRDVKSSNILLDEKLNAKVSDFG 479
DF L + + Q+A+G+ +L S HRD+ + NILL EK K+ DFG
Sbjct: 145 DF------LTLEHLICYSFQVAKGMEFLASRKC---IHRDLAARNILLSEKNVVKICDFG 195
Query: 480 LSRLVERTETNDSHIFTTAQGTMGYLDPEYYRNFQLTDKSDVYSFGVVLLELLT 533
L+R + + D A+ + ++ PE + T +SDV+SFGV+L E+ +
Sbjct: 196 LARDIYKDP--DYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 247
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 65/208 (31%), Positives = 100/208 (48%), Gaps = 21/208 (10%)
Query: 338 IGTGGFGEV--FKGIL--DDGTVTAIKRAKLGNTKGTDLVLNEVRILCQVNHRSLVRLLG 393
IG G F +V + IL + V I + +L N+ + EVRI+ +NH ++V+L
Sbjct: 22 IGKGNFAKVKLARHILTGKEVAVRIIDKTQL-NSSSLQKLFREVRIMKVLNHPNIVKLFE 80
Query: 394 CCVELDQTL-MIYEYIPNGTLFDHLHCDFTGKWPPLPWHLRLVIAHQIAEGLTYLHSAAV 452
+E ++TL ++ EY G +FD+L K R QI + Y H
Sbjct: 81 V-IETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFR-----QIVSAVQYCHQKF- 133
Query: 453 PPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDSHIFTTAQGTMGYLDPEYYRN 512
I HRD+K+ N+LLD +N K++DFG S E T N F G+ Y PE ++
Sbjct: 134 --IVHRDLKAENLLLDADMNIKIADFGFSN--EFTFGNKLDEFC---GSPPYAAPELFQG 186
Query: 513 FQLTD-KSDVYSFGVVLLELLTSKKAID 539
+ + DV+S GV+L L++ D
Sbjct: 187 KKYDGPEVDVWSLGVILYTLVSGSLPFD 214
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/233 (26%), Positives = 98/233 (42%), Gaps = 18/233 (7%)
Query: 322 GKEIRRATNNFSKDNLIGTGGFGEVFKGILDDGT-VTAIK---RAKLGNTKGTDLVLNEV 377
K+ + A +F +G G FG V+ + A+K +A+L + EV
Sbjct: 2 SKKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREV 61
Query: 378 RILCQVNHRSLVRLLGCCVELDQTLMIYEYIPNGTLFDHLHCDFTGKWPPLPWHLRLVIA 437
I + H +++RL G + + +I EY P GT++ L K
Sbjct: 62 EIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQ-----KLSKFDEQRTATYI 116
Query: 438 HQIAEGLTYLHSAAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDSHIFTT 497
++A L+Y HS V HRD+K N+LL K++DFG S V + +
Sbjct: 117 TELANALSYCHSKRV---IHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRXXLC-- 169
Query: 498 AQGTMGYLDPEYYRNFQLTDKSDVYSFGVVLLELLTSKKAIDFNREEENVNLV 550
GT+ YL PE +K D++S GV+ E L K + N +E +
Sbjct: 170 --GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRI 220
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 94/205 (45%), Gaps = 12/205 (5%)
Query: 331 NFSKDNLIGTGGFGEVFKGI-LDDGTVTAIKRAK---LGNTKGTDLVLNEVRILCQVNHR 386
NF + IG G F EV++ L DG A+K+ + L + K + E+ +L Q+NH
Sbjct: 33 NFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHP 92
Query: 387 SLVRLLGCCVELDQTLMIYEYIPNGTLFDHLHCDFTGKWPPLPWHLRLVIAHQIAEGLTY 446
++++ +E ++ ++ E G L + F + +P Q+ L +
Sbjct: 93 NVIKYYASFIEDNELNIVLELADAGDL-SRMIKHFKKQKRLIPERTVWKYFVQLCSALEH 151
Query: 447 LHSAAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDSHIFTTAQGTMGYLD 506
+HS V HRD+K +N+ + K+ D GL R ++T +H GT Y+
Sbjct: 152 MHSRRV---MHRDIKPANVFITATGVVKLGDLGLGRFFS-SKTTAAHSLV---GTPYYMS 204
Query: 507 PEYYRNFQLTDKSDVYSFGVVLLEL 531
PE KSD++S G +L E+
Sbjct: 205 PERIHENGYNFKSDIWSLGCLLYEM 229
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 70/230 (30%), Positives = 107/230 (46%), Gaps = 38/230 (16%)
Query: 331 NFSKDNL-----IGTGGFGEVFK----GILDDGT--VTAIKRAKLGNTKGTDLVL-NEVR 378
F +D L +G G FG+V + GI T A+K K G T L +E++
Sbjct: 23 EFPRDRLNLGKPLGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELK 82
Query: 379 ILCQVNHR-SLVRLLGCCVELDQTLM-IYEYIPNGTL-------------FDHLHCDFTG 423
IL + H ++V LLG C + LM I E+ G L + L+ DF
Sbjct: 83 ILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDF-- 140
Query: 424 KWPPLPWHLRLVIAHQIAEGLTYLHSAAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRL 483
L + + Q+A+G+ +L S HRD+ + NILL EK K+ DFGL+R
Sbjct: 141 ----LTLEHLIXYSFQVAKGMEFLASRKX---IHRDLAARNILLSEKNVVKIXDFGLARD 193
Query: 484 VERTETNDSHIFTTAQGTMGYLDPEYYRNFQLTDKSDVYSFGVVLLELLT 533
+ + D A+ + ++ PE + T +SDV+SFGV+L E+ +
Sbjct: 194 IYKDP--DYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 241
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/207 (30%), Positives = 94/207 (45%), Gaps = 21/207 (10%)
Query: 330 NNFSKDNLIGTGGFGEV-FKGILDDGTVTAIK---RAKLGNTKGTDLVLNEVRILCQVNH 385
+ F + +GTG FG V ++ G A+K + K+ K + LNE RIL VN
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 101
Query: 386 RSLVRLLGCCVELDQTLMIYEYIPNGTLFDHLHCDFTGKWPPLPWHLRLVIAHQIAEGLT 445
L +L + M+ EY P G +F HL P H R A QI
Sbjct: 102 PFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFXEP----HARFYAA-QIVLTFE 156
Query: 446 YLHSAAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVE-RTETNDSHIFTTAQGTMGY 504
YLHS + +RD+K N+++D++ KV+DFG ++ V+ RT GT Y
Sbjct: 157 YLHSL---DLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRT--------WXLCGTPEY 205
Query: 505 LDPEYYRNFQLTDKSDVYSFGVVLLEL 531
L PE + D ++ GV++ E+
Sbjct: 206 LAPEIILSKGYNKAVDWWALGVLIYEM 232
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/202 (29%), Positives = 93/202 (46%), Gaps = 20/202 (9%)
Query: 338 IGTGGFGEVFKGIL----DDGTVTAIKRAKLGNTKGT-DLVLNEVRILCQVNHRSLVRLL 392
IG G FG+V +GI + AIK K + + L E + Q +H +V+L+
Sbjct: 21 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 80
Query: 393 GCCVELDQTLMIYEYIPNGTLFDHLHCDFTGKWPPLPWHLRLVIAHQIAEGLTYLHSAAV 452
G E + +I E G L L + L ++ A+Q++ L YL S
Sbjct: 81 GVITE-NPVWIIMELCTLGELRSFLQV----RKYSLDLASLILYAYQLSTALAYLESKR- 134
Query: 453 PPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDSHIFTTAQGTM--GYLDPEYY 510
HRD+ + N+L+ K+ DFGLSR +E DS + ++G + ++ PE
Sbjct: 135 --FVHRDIAARNVLVSSNDCVKLGDFGLSRYME-----DSTYYKASKGKLPIKWMAPESI 187
Query: 511 RNFQLTDKSDVYSFGVVLLELL 532
+ T SDV+ FGV + E+L
Sbjct: 188 NFRRFTSASDVWMFGVCMWEIL 209
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 59/202 (29%), Positives = 93/202 (46%), Gaps = 20/202 (9%)
Query: 338 IGTGGFGEVFKGIL----DDGTVTAIKRAKLGNTKGT-DLVLNEVRILCQVNHRSLVRLL 392
IG G FG+V +GI + AIK K + + L E + Q +H +V+L+
Sbjct: 18 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 77
Query: 393 GCCVELDQTLMIYEYIPNGTLFDHLHCDFTGKWPPLPWHLRLVIAHQIAEGLTYLHSAAV 452
G E + +I E G L L + L ++ A+Q++ L YL S
Sbjct: 78 GVITE-NPVWIIMELCTLGELRSFLQV----RKYSLDLASLILYAYQLSTALAYLESKR- 131
Query: 453 PPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDSHIFTTAQGTM--GYLDPEYY 510
HRD+ + N+L+ K+ DFGLSR +E DS + ++G + ++ PE
Sbjct: 132 --FVHRDIAARNVLVSSNDCVKLGDFGLSRYME-----DSTYYKASKGKLPIKWMAPESI 184
Query: 511 RNFQLTDKSDVYSFGVVLLELL 532
+ T SDV+ FGV + E+L
Sbjct: 185 NFRRFTSASDVWMFGVCMWEIL 206
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 59/202 (29%), Positives = 93/202 (46%), Gaps = 20/202 (9%)
Query: 338 IGTGGFGEVFKGIL----DDGTVTAIKRAKLGNTKGT-DLVLNEVRILCQVNHRSLVRLL 392
IG G FG+V +GI + AIK K + + L E + Q +H +V+L+
Sbjct: 15 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 74
Query: 393 GCCVELDQTLMIYEYIPNGTLFDHLHCDFTGKWPPLPWHLRLVIAHQIAEGLTYLHSAAV 452
G E + +I E G L L + L ++ A+Q++ L YL S
Sbjct: 75 GVITE-NPVWIIMELCTLGELRSFLQV----RKYSLDLASLILYAYQLSTALAYLESKR- 128
Query: 453 PPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDSHIFTTAQGTM--GYLDPEYY 510
HRD+ + N+L+ K+ DFGLSR +E DS + ++G + ++ PE
Sbjct: 129 --FVHRDIAARNVLVSSNDCVKLGDFGLSRYME-----DSTYYKASKGKLPIKWMAPESI 181
Query: 511 RNFQLTDKSDVYSFGVVLLELL 532
+ T SDV+ FGV + E+L
Sbjct: 182 NFRRFTSASDVWMFGVCMWEIL 203
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 59/202 (29%), Positives = 93/202 (46%), Gaps = 20/202 (9%)
Query: 338 IGTGGFGEVFKGIL----DDGTVTAIKRAKLGNTKGT-DLVLNEVRILCQVNHRSLVRLL 392
IG G FG+V +GI + AIK K + + L E + Q +H +V+L+
Sbjct: 20 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 79
Query: 393 GCCVELDQTLMIYEYIPNGTLFDHLHCDFTGKWPPLPWHLRLVIAHQIAEGLTYLHSAAV 452
G E + +I E G L L + L ++ A+Q++ L YL S
Sbjct: 80 GVITE-NPVWIIMELCTLGELRSFLQV----RKYSLDLASLILYAYQLSTALAYLESKR- 133
Query: 453 PPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDSHIFTTAQGTM--GYLDPEYY 510
HRD+ + N+L+ K+ DFGLSR +E DS + ++G + ++ PE
Sbjct: 134 --FVHRDIAARNVLVSSNDCVKLGDFGLSRYME-----DSTYYKASKGKLPIKWMAPESI 186
Query: 511 RNFQLTDKSDVYSFGVVLLELL 532
+ T SDV+ FGV + E+L
Sbjct: 187 NFRRFTSASDVWMFGVCMWEIL 208
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 60/203 (29%), Positives = 94/203 (46%), Gaps = 22/203 (10%)
Query: 338 IGTGGFGEVFKGIL----DDGTVTAIKRAKLGNTKGT-DLVLNEVRILCQVNHRSLVRLL 392
IG G FG+V +GI + AIK K + + L E + Q +H +V+L+
Sbjct: 398 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 457
Query: 393 GCCVELDQTLMIYEYIPNGTLFDHLHC-DFTGKWPPLPWHLRLVIAHQIAEGLTYLHSAA 451
G E + +I E G L L F+ L ++ A+Q++ L YL S
Sbjct: 458 GVITE-NPVWIIMELCTLGELRSFLQVRKFSLDLASL-----ILYAYQLSTALAYLESKR 511
Query: 452 VPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDSHIFTTAQGTM--GYLDPEY 509
HRD+ + N+L+ K+ DFGLSR +E DS + ++G + ++ PE
Sbjct: 512 ---FVHRDIAARNVLVSSNDCVKLGDFGLSRYME-----DSTYYKASKGKLPIKWMAPES 563
Query: 510 YRNFQLTDKSDVYSFGVVLLELL 532
+ T SDV+ FGV + E+L
Sbjct: 564 INFRRFTSASDVWMFGVCMWEIL 586
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 62/207 (29%), Positives = 96/207 (46%), Gaps = 21/207 (10%)
Query: 330 NNFSKDNLIGTGGFGEVF----KGILDDGTVTAIKRAKLGNTKGTDLVLNEVRILCQVNH 385
+ F + +GTG FG V K + + + + K+ K + LNE RIL VN
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 386 RSLVRLLGCCVELDQTLMIYEYIPNGTLFDHLHCDFTGKWPPLPWHLRLVIAHQIAEGLT 445
LV+L + M+ EY+ G +F HL G++ P H R A QI
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRR--IGRFSE-P-HARFYAA-QIVLTFE 155
Query: 446 YLHSAAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVE-RTETNDSHIFTTAQGTMGY 504
YLHS + +RD+K N+L+D++ +V+DFG ++ V+ RT GT Y
Sbjct: 156 YLHSL---DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT--------WXLXGTPEY 204
Query: 505 LDPEYYRNFQLTDKSDVYSFGVVLLEL 531
L PE + D ++ GV++ E+
Sbjct: 205 LAPEIILSKGYNKAVDWWALGVLIYEM 231
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 63/233 (27%), Positives = 108/233 (46%), Gaps = 41/233 (17%)
Query: 332 FSKDNL-----IGTGGFGEVFK----GILDD----GTVTAIKRAKLGNTKG--TDLVLNE 376
F +D L +G G FG+V GI D A+K K T+ +DLV +E
Sbjct: 32 FPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLV-SE 90
Query: 377 VRILCQV-NHRSLVRLLGCCVELDQTLMIYEYIPNGTLFDHLHCDFTGKWPP-------- 427
+ ++ + H++++ LLG C + +I EY G L ++L + PP
Sbjct: 91 MEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRA----RRPPGMEXSYDI 146
Query: 428 -------LPWHLRLVIAHQIAEGLTYLHSAAVPPIYHRDVKSSNILLDEKLNAKVSDFGL 480
+ + + +Q+A G+ YL S HRD+ + N+L+ E K++DFGL
Sbjct: 147 NRVPEEQMTFKDLVSCTYQLARGMEYLASQKC---IHRDLAARNVLVTENNVMKIADFGL 203
Query: 481 SRLVERTETNDSHIFTTAQGTMGYLDPEYYRNFQLTDKSDVYSFGVVLLELLT 533
+R + + T + + ++ PE + T +SDV+SFGV++ E+ T
Sbjct: 204 ARDINNIDXXKKT--TNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 100/211 (47%), Gaps = 21/211 (9%)
Query: 329 TNNFSKDNLIGTGGFGEVF----KGILDDGTVTAIKRAKLGNTKGTDLVLNEVRILCQVN 384
++ + + +G+G +GEV K + + IK++ + T + +L+EV +L Q++
Sbjct: 3 SDRYQRVKKLGSGAYGEVLLCKDKLTGAERAIKIIKKSSVTTTSNSGALLDEVAVLKQLD 62
Query: 385 HRSLVRLLGCCVELDQTLMIYEYIPNGTLFDHLHCDFTGKWPPLPWHLRLVIAHQIAEGL 444
H ++++L + ++ E G LFD + K+ + VI Q+ G
Sbjct: 63 HPNIMKLYEFFEDKRNYYLVMEVYRGGELFDEII--LRQKFSEVD---AAVIMKQVLSGT 117
Query: 445 TYLHSAAVPPIYHRDVKSSNILLDEKLN---AKVSDFGLSRLVERTETNDSHIFTTAQGT 501
TYLH I HRD+K N+LL+ K K+ DFGLS E + GT
Sbjct: 118 TYLHK---HNIVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEVGGKMKERL-----GT 169
Query: 502 MGYLDPEYYRNFQLTDKSDVYSFGVVLLELL 532
Y+ PE R + +K DV+S GV+L LL
Sbjct: 170 AYYIAPEVLRK-KYDEKCDVWSCGVILYILL 199
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 59/202 (29%), Positives = 93/202 (46%), Gaps = 20/202 (9%)
Query: 338 IGTGGFGEVFKGIL----DDGTVTAIKRAKLGNTKGT-DLVLNEVRILCQVNHRSLVRLL 392
IG G FG+V +GI + AIK K + + L E + Q +H +V+L+
Sbjct: 18 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 77
Query: 393 GCCVELDQTLMIYEYIPNGTLFDHLHCDFTGKWPPLPWHLRLVIAHQIAEGLTYLHSAAV 452
G E + +I E G L L + L ++ A+Q++ L YL S
Sbjct: 78 GVITE-NPVWIIMELCTLGELRSFLQV----RKYSLDLASLILYAYQLSTALAYLESKR- 131
Query: 453 PPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDSHIFTTAQGTM--GYLDPEYY 510
HRD+ + N+L+ K+ DFGLSR +E DS + ++G + ++ PE
Sbjct: 132 --FVHRDIAARNVLVSSNDCVKLGDFGLSRYME-----DSTYYKASKGKLPIKWMAPESI 184
Query: 511 RNFQLTDKSDVYSFGVVLLELL 532
+ T SDV+ FGV + E+L
Sbjct: 185 NFRRFTSASDVWMFGVCMWEIL 206
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 95/206 (46%), Gaps = 19/206 (9%)
Query: 330 NNFSKDNLIGTGGFGEVF----KGILDDGTVTAIKRAKLGNTKGTDLVLNEVRILCQVNH 385
+ F + +GTG FG V K + + + + K+ K + LNE RIL VN
Sbjct: 62 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 121
Query: 386 RSLVRLLGCCVELDQTLMIYEYIPNGTLFDHLHCDFTGKWPPLPWHLRLVIAHQIAEGLT 445
LV+L + M+ EY+ G +F HL G++ P H R A QI
Sbjct: 122 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRR--IGRFSE-P-HARFYAA-QIVLTFE 176
Query: 446 YLHSAAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDSHIFTTAQGTMGYL 505
YLHS + +RD+K N+L+D++ +V+DFG ++ V+ T GT YL
Sbjct: 177 YLHSL---DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGAT-------WTLCGTPEYL 226
Query: 506 DPEYYRNFQLTDKSDVYSFGVVLLEL 531
PE + D ++ GV++ E+
Sbjct: 227 APEIILSKGYNKAVDWWALGVLIYEM 252
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 65/235 (27%), Positives = 109/235 (46%), Gaps = 45/235 (19%)
Query: 332 FSKDNL-----IGTGGFGEVFK----GILDD----GTVTAIKRAKLGNTKG--TDLVLNE 376
F +D L +G G FG+V GI D A+K K T+ +DLV +E
Sbjct: 32 FPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLV-SE 90
Query: 377 VRILCQV-NHRSLVRLLGCCVELDQTLMIYEYIPNGTLFDHLHCDFTGKWPP-------- 427
+ ++ + H++++ LLG C + +I EY G L ++L + PP
Sbjct: 91 MEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRA----RRPPGMEYSYDI 146
Query: 428 -------LPWHLRLVIAHQIAEGLTYLHSAAVPPIYHRDVKSSNILLDEKLNAKVSDFGL 480
+ + + +Q+A G+ YL S HRD+ + N+L+ E K++DFGL
Sbjct: 147 NRVPEEQMTFKDLVSCTYQLARGMEYLASQKC---IHRDLAARNVLVTENNVMKIADFGL 203
Query: 481 SRLVERTETNDSHIFTTAQGTM--GYLDPEYYRNFQLTDKSDVYSFGVVLLELLT 533
+R + N + T G + ++ PE + T +SDV+SFGV++ E+ T
Sbjct: 204 ARDI----NNIDYYKNTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 64/207 (30%), Positives = 98/207 (47%), Gaps = 21/207 (10%)
Query: 330 NNFSKDNLIGTGGFGEV-FKGILDDGTVTAIK---RAKLGNTKGTDLVLNEVRILCQVNH 385
+ F + +GTG FG V ++ G A+K + K+ K + LNE RIL VN
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 386 RSLVRLLGCCVELDQTLMIYEYIPNGTLFDHLHCDFTGKWPPLPWHLRLVIAHQIAEGLT 445
LV+L + M+ EY+ G +F HL G++ P H R A QI
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRR--IGRFSE-P-HARFYAA-QIVLTFE 155
Query: 446 YLHSAAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVE-RTETNDSHIFTTAQGTMGY 504
YLHS + +RD+K N+L+D++ +V+DFG ++ V+ RT GT Y
Sbjct: 156 YLHSL---DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT--------WXLCGTPEY 204
Query: 505 LDPEYYRNFQLTDKSDVYSFGVVLLEL 531
L PE + D ++ GV++ E+
Sbjct: 205 LAPEIILSKGYNKAVDWWALGVLIYEM 231
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 62/218 (28%), Positives = 104/218 (47%), Gaps = 28/218 (12%)
Query: 338 IGTGGFGEVFK----GILDDG----TVTAIKRAKLGNTKG--TDLVLNEVRILCQV-NHR 386
+G G FG+V G+ D T A+K K T+ +DL+ +E+ ++ + H+
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLI-SEMEMMKMIGKHK 94
Query: 387 SLVRLLGCCVELDQTLMIYEYIPNGTLFDHLHC--------DFTGKWPP---LPWHLRLV 435
+++ LLG C + +I EY G L ++L F P L +
Sbjct: 95 NIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEFSFNPSHNPEEQLSSKDLVS 154
Query: 436 IAHQIAEGLTYLHSAAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDSHIF 495
A+Q+A G+ YL S HRD+ + N+L+ E K++DFGL+R + +
Sbjct: 155 CAYQVARGMEYLASKKC---IHRDLAARNVLVTEDNVMKIADFGLARDIHHIDXXKKT-- 209
Query: 496 TTAQGTMGYLDPEYYRNFQLTDKSDVYSFGVVLLELLT 533
T + + ++ PE + T +SDV+SFGV+L E+ T
Sbjct: 210 TNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 247
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 62/207 (29%), Positives = 96/207 (46%), Gaps = 21/207 (10%)
Query: 330 NNFSKDNLIGTGGFGEVF----KGILDDGTVTAIKRAKLGNTKGTDLVLNEVRILCQVNH 385
+ F + +GTG FG V K + + + + K+ K + LNE RIL VN
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 386 RSLVRLLGCCVELDQTLMIYEYIPNGTLFDHLHCDFTGKWPPLPWHLRLVIAHQIAEGLT 445
LV+L + M+ EY+ G +F HL G++ P H R A QI
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRR--IGRFSE-P-HARFYAA-QIVLTFE 155
Query: 446 YLHSAAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVE-RTETNDSHIFTTAQGTMGY 504
YLHS + +RD+K N+L+D++ +V+DFG ++ V+ RT GT Y
Sbjct: 156 YLHSL---DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT--------WXLAGTPEY 204
Query: 505 LDPEYYRNFQLTDKSDVYSFGVVLLEL 531
L PE + D ++ GV++ E+
Sbjct: 205 LAPEIILSKGYNKAVDWWALGVLIYEM 231
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 62/230 (26%), Positives = 96/230 (41%), Gaps = 24/230 (10%)
Query: 328 ATNNFSKDNLIGTGGFGEVF-------KGILDDGTVTAIKRAKLGNTKGTDLVLNEVRIL 380
A +F +G G FG V+ K IL + + +A+L + EV I
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFIL---ALKVLFKAQLEKAGVEHQLRREVEIQ 62
Query: 381 CQVNHRSLVRLLGCCVELDQTLMIYEYIPNGTLFDHLHCDFTGKWPPLPWHLRLVIAHQI 440
+ H +++RL G + + +I EY P GT++ L K ++
Sbjct: 63 SHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQ-----KLSKFDEQRTATYITEL 117
Query: 441 AEGLTYLHSAAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDSHIFTTAQG 500
A L+Y HS V HRD+K N+LL K++DFG S V + + G
Sbjct: 118 ANALSYCHSKRV---IHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRXXLC----G 168
Query: 501 TMGYLDPEYYRNFQLTDKSDVYSFGVVLLELLTSKKAIDFNREEENVNLV 550
T+ YL PE +K D++S GV+ E L K + N +E +
Sbjct: 169 TLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRI 218
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 63/233 (27%), Positives = 108/233 (46%), Gaps = 41/233 (17%)
Query: 332 FSKDNL-----IGTGGFGEVFK----GILDD----GTVTAIKRAKLGNTKG--TDLVLNE 376
F +D L +G G FG+V GI D A+K K T+ +DLV +E
Sbjct: 32 FPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLV-SE 90
Query: 377 VRILCQV-NHRSLVRLLGCCVELDQTLMIYEYIPNGTLFDHLHCDFTGKWPP-------- 427
+ ++ + H++++ LLG C + +I EY G L ++L + PP
Sbjct: 91 MEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRA----RRPPGMEYSYDI 146
Query: 428 -------LPWHLRLVIAHQIAEGLTYLHSAAVPPIYHRDVKSSNILLDEKLNAKVSDFGL 480
+ + + +Q+A G+ YL S HRD+ + N+L+ E K++DFGL
Sbjct: 147 NRVPEEQMTFKDLVSCTYQLARGMEYLASQKC---IHRDLAARNVLVTENNVMKIADFGL 203
Query: 481 SRLVERTETNDSHIFTTAQGTMGYLDPEYYRNFQLTDKSDVYSFGVVLLELLT 533
+R + + T + + ++ PE + T +SDV+SFGV++ E+ T
Sbjct: 204 ARDINNIDXXKKT--TNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 102/211 (48%), Gaps = 23/211 (10%)
Query: 338 IGTGGFGEVFKGILDD------GTVTAIKRA-KLGNTKGTDLVLNEVRILCQVNHRSLVR 390
+G G FG V++G D T A+K + + + LNE ++ +VR
Sbjct: 24 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 83
Query: 391 LLGCCVELDQTLMIYEYIPNGTLFDHLHC------DFTGKWPPLPWHLRLVIAHQIAEGL 444
LLG + TL++ E + +G L +L + G+ PP + + +A +IA+G+
Sbjct: 84 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEM-IQMAAEIADGM 142
Query: 445 TYLHSAAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDSHIFTTAQGTM-- 502
YL++ HRD+ + N ++ K+ DFG++R + T+ + +G +
Sbjct: 143 AYLNAKK---FVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETD----YYRKGGKGLLPV 195
Query: 503 GYLDPEYYRNFQLTDKSDVYSFGVVLLELLT 533
++ PE ++ T SD++SFGVVL E+ +
Sbjct: 196 RWMAPESLKDGVFTTSSDMWSFGVVLWEITS 226
>pdb|3A99|A Chain A, Structure Of Pim-1 Kinase Crystallized In The Presence Of
P27kip1 Carboxy-Terminal Peptide
Length = 320
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 71/257 (27%), Positives = 116/257 (45%), Gaps = 28/257 (10%)
Query: 316 SARIFTGKEIRRATNNFSKDNLIGTGGFGEVFKGI-LDDGTVTAIKRAK------LGNTK 368
+ ++ GKE + + L+G+GGFG V+ GI + D AIK + G
Sbjct: 29 ATKLAPGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELP 88
Query: 369 GTDLVLNEVRILCQVN--HRSLVRLLGCCVELDQTLMIYEYI-PNGTLFDHLHCDFTGKW 425
V EV +L +V+ ++RLL D ++I E P LF DF +
Sbjct: 89 NGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLF-----DFITER 143
Query: 426 PPLPWHLRLVIAHQIAEGLTYLHSAAVPPIYHRDVKSSNILLD-EKLNAKVSDFGLSRLV 484
L L Q+ E + + H+ V HRD+K NIL+D + K+ DFG L+
Sbjct: 144 GALQEELARSFFWQVLEAVRHCHNCGV---LHRDIKDENILIDLNRGELKLIDFGSGALL 200
Query: 485 ERTETNDSHIFTTAQGTMGYLDPEYYRNFQLTDKS-DVYSFGVVLLELLTSKKAIDFNRE 543
+ T ++T GT Y PE+ R + +S V+S G++L +++ I F +
Sbjct: 201 KDT------VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGD--IPFEHD 252
Query: 544 EENVNLVVYMKKIMDEE 560
EE + V+ ++ + E
Sbjct: 253 EEIIRGQVFFRQRVSSE 269
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 65/235 (27%), Positives = 109/235 (46%), Gaps = 45/235 (19%)
Query: 332 FSKDNL-----IGTGGFGEVFK----GILDD----GTVTAIKRAKLGNTKG--TDLVLNE 376
F +D L +G G FG+V GI D A+K K T+ +DLV +E
Sbjct: 32 FPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLV-SE 90
Query: 377 VRILCQV-NHRSLVRLLGCCVELDQTLMIYEYIPNGTLFDHLHCDFTGKWPP-------- 427
+ ++ + H++++ LLG C + +I EY G L ++L + PP
Sbjct: 91 MEMMKMIGKHKNIIHLLGACTQDGPLYVIVEYASKGNLREYLRA----RRPPGMEYSYDI 146
Query: 428 -------LPWHLRLVIAHQIAEGLTYLHSAAVPPIYHRDVKSSNILLDEKLNAKVSDFGL 480
+ + + +Q+A G+ YL S HRD+ + N+L+ E K++DFGL
Sbjct: 147 NRVPEEQMTFKDLVSCTYQLARGMEYLASQKC---IHRDLAARNVLVTENNVMKIADFGL 203
Query: 481 SRLVERTETNDSHIFTTAQGTM--GYLDPEYYRNFQLTDKSDVYSFGVVLLELLT 533
+R + N + T G + ++ PE + T +SDV+SFGV++ E+ T
Sbjct: 204 ARDI----NNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 63/207 (30%), Positives = 96/207 (46%), Gaps = 21/207 (10%)
Query: 330 NNFSKDNLIGTGGFGEVF----KGILDDGTVTAIKRAKLGNTKGTDLVLNEVRILCQVNH 385
+ F + +GTG FG V K + + + + K+ K + LNE RIL VN
Sbjct: 28 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 87
Query: 386 RSLVRLLGCCVELDQTLMIYEYIPNGTLFDHLHCDFTGKWPPLPWHLRLVIAHQIAEGLT 445
LV+L + M+ EY+ G +F HL G++ P H R A QI
Sbjct: 88 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRR--IGRFSE-P-HARFYAA-QIVLTFE 142
Query: 446 YLHSAAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVE-RTETNDSHIFTTAQGTMGY 504
YLHS + +RD+K N+L+DE+ +V+DFG ++ V+ RT GT Y
Sbjct: 143 YLHSL---DLIYRDLKPENLLIDEQGYIQVTDFGFAKRVKGRT--------WXLCGTPEY 191
Query: 505 LDPEYYRNFQLTDKSDVYSFGVVLLEL 531
L PE + D ++ GV++ E+
Sbjct: 192 LAPEIILSKGYNKAVDWWALGVLIYEM 218
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 63/207 (30%), Positives = 95/207 (45%), Gaps = 21/207 (10%)
Query: 330 NNFSKDNLIGTGGFGEVF----KGILDDGTVTAIKRAKLGNTKGTDLVLNEVRILCQVNH 385
+ F + +GTG FG V K + + + + K+ K + LNE RI VN
Sbjct: 42 DQFERIRTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRIQQAVNF 101
Query: 386 RSLVRLLGCCVELDQTLMIYEYIPNGTLFDHLHCDFTGKWPPLPWHLRLVIAHQIAEGLT 445
LV+L + M+ EY P G +F HL G++ P H R A QI
Sbjct: 102 PFLVKLEFSFKDNSNLYMVLEYAPGGEMFSHLRR--IGRFSE-P-HARFYAA-QIVLTFE 156
Query: 446 YLHSAAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVE-RTETNDSHIFTTAQGTMGY 504
YLHS + +RD+K N+L+D++ KV+DFG ++ V+ RT GT Y
Sbjct: 157 YLHSL---DLIYRDLKPENLLIDQQGYIKVADFGFAKRVKGRT--------WXLCGTPEY 205
Query: 505 LDPEYYRNFQLTDKSDVYSFGVVLLEL 531
L PE + D ++ GV++ E+
Sbjct: 206 LAPEIILSKGYNKAVDWWALGVLIYEM 232
>pdb|1XQZ|A Chain A, Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolution
pdb|1XR1|A Chain A, Crystal Structure Of Hpim-1 Kinase In Complex With Amp-Pnp
At 2.1 A Resolution
Length = 300
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 71/257 (27%), Positives = 116/257 (45%), Gaps = 28/257 (10%)
Query: 316 SARIFTGKEIRRATNNFSKDNLIGTGGFGEVFKGI-LDDGTVTAIKRAK------LGNTK 368
+ ++ GKE + + L+G+GGFG V+ GI + D AIK + G
Sbjct: 9 ATKLAPGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELP 68
Query: 369 GTDLVLNEVRILCQVN--HRSLVRLLGCCVELDQTLMIYEYI-PNGTLFDHLHCDFTGKW 425
V EV +L +V+ ++RLL D ++I E P LF DF +
Sbjct: 69 NGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLF-----DFITER 123
Query: 426 PPLPWHLRLVIAHQIAEGLTYLHSAAVPPIYHRDVKSSNILLD-EKLNAKVSDFGLSRLV 484
L L Q+ E + + H+ V HRD+K NIL+D + K+ DFG L+
Sbjct: 124 GALQEELARSFFWQVLEAVRHCHNCGV---LHRDIKDENILIDLNRGELKLIDFGSGALL 180
Query: 485 ERTETNDSHIFTTAQGTMGYLDPEYYRNFQLTDKS-DVYSFGVVLLELLTSKKAIDFNRE 543
+ T ++T GT Y PE+ R + +S V+S G++L +++ I F +
Sbjct: 181 KDT------VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGD--IPFEHD 232
Query: 544 EENVNLVVYMKKIMDEE 560
EE + V+ ++ + E
Sbjct: 233 EEIIRGQVFFRQRVSSE 249
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 60/203 (29%), Positives = 94/203 (46%), Gaps = 22/203 (10%)
Query: 338 IGTGGFGEVFKGIL----DDGTVTAIKRAKLGNTKGT-DLVLNEVRILCQVNHRSLVRLL 392
IG G FG+V +GI + AIK K + + L E + Q +H +V+L+
Sbjct: 398 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 457
Query: 393 GCCVELDQTLMIYEYIPNGTLFDHLHC-DFTGKWPPLPWHLRLVIAHQIAEGLTYLHSAA 451
G E + +I E G L L F+ L ++ A+Q++ L YL S
Sbjct: 458 GVITE-NPVWIIMELCTLGELRSFLQVRKFSLDLASL-----ILYAYQLSTALAYLESKR 511
Query: 452 VPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDSHIFTTAQGTM--GYLDPEY 509
HRD+ + N+L+ K+ DFGLSR +E DS + ++G + ++ PE
Sbjct: 512 ---FVHRDIAARNVLVSATDCVKLGDFGLSRYME-----DSTYYKASKGKLPIKWMAPES 563
Query: 510 YRNFQLTDKSDVYSFGVVLLELL 532
+ T SDV+ FGV + E+L
Sbjct: 564 INFRRFTSASDVWMFGVCMWEIL 586
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 62/230 (26%), Positives = 96/230 (41%), Gaps = 24/230 (10%)
Query: 328 ATNNFSKDNLIGTGGFGEVF-------KGILDDGTVTAIKRAKLGNTKGTDLVLNEVRIL 380
A +F +G G FG V+ K IL + + +A+L + EV I
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFIL---ALKVLFKAQLEKAGVEHQLRREVEIQ 65
Query: 381 CQVNHRSLVRLLGCCVELDQTLMIYEYIPNGTLFDHLHCDFTGKWPPLPWHLRLVIAHQI 440
+ H +++RL G + + +I EY P GT++ L K ++
Sbjct: 66 SHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQ-----KLSKFDEQRTATYITEL 120
Query: 441 AEGLTYLHSAAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDSHIFTTAQG 500
A L+Y HS V HRD+K N+LL K++DFG S V + + G
Sbjct: 121 ANALSYCHSKRV---IHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRXXLC----G 171
Query: 501 TMGYLDPEYYRNFQLTDKSDVYSFGVVLLELLTSKKAIDFNREEENVNLV 550
T+ YL PE +K D++S GV+ E L K + N +E +
Sbjct: 172 TLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRI 221
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 60/203 (29%), Positives = 93/203 (45%), Gaps = 22/203 (10%)
Query: 338 IGTGGFGEVFKGIL----DDGTVTAIKRAKLGNTKGT-DLVLNEVRILCQVNHRSLVRLL 392
IG G FG+V +GI + AIK K + + L E + Q +H +V+L+
Sbjct: 18 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 77
Query: 393 GCCVELDQTLMIYEYIPNGTLFDHLHC-DFTGKWPPLPWHLRLVIAHQIAEGLTYLHSAA 451
G E + +I E G L L F+ L ++ A+Q++ L YL S
Sbjct: 78 GVITE-NPVWIIMELCTLGELRSFLQVRKFSLDLASL-----ILYAYQLSTALAYLESKR 131
Query: 452 VPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDSHIFTTAQGTM--GYLDPEY 509
HRD+ + N+L+ K+ DFGLSR +E DS ++G + ++ PE
Sbjct: 132 ---FVHRDIAARNVLVSSNDCVKLGDFGLSRYME-----DSTXXKASKGKLPIKWMAPES 183
Query: 510 YRNFQLTDKSDVYSFGVVLLELL 532
+ T SDV+ FGV + E+L
Sbjct: 184 INFRRFTSASDVWMFGVCMWEIL 206
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 59/202 (29%), Positives = 93/202 (46%), Gaps = 18/202 (8%)
Query: 336 NLIGTGGFGEVFKGILD-DGTVTAIK---RAKLGNTKGTDLVLNEVRILCQVNHRSLVRL 391
+ +G G FG+V G + G A+K R K+ + + E++ L H +++L
Sbjct: 22 DTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKL 81
Query: 392 LGCCVELDQTLMIYEYIPNGTLFDHLHCDFTGKWPPLPWHLRLVIAHQIAEGLTYLHSAA 451
M+ EY+ G LFD++ C G+ L + QI G+ Y H
Sbjct: 82 YQVISTPSDIFMVMEYVSGGELFDYI-CK-NGR---LDEKESRRLFQQILSGVDYCHRHM 136
Query: 452 VPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDSHIFTTAQGTMGYLDPEYYR 511
V HRD+K N+LLD +NAK++DFGLS ++ +D + G+ Y PE
Sbjct: 137 V---VHRDLKPENVLLDAHMNAKIADFGLSNMM-----SDGEFLRXSCGSPNYAAPEVIS 188
Query: 512 -NFQLTDKSDVYSFGVVLLELL 532
+ D++S GV+L LL
Sbjct: 189 GRLYAGPEVDIWSSGVILYALL 210
>pdb|2XJ0|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-4 From
Crystallographic Fragment Screen
Length = 301
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 71/257 (27%), Positives = 116/257 (45%), Gaps = 28/257 (10%)
Query: 316 SARIFTGKEIRRATNNFSKDNLIGTGGFGEVFKGI-LDDGTVTAIKRAK------LGNTK 368
+ ++ GKE + + L+G+GGFG V+ GI + D AIK + G
Sbjct: 10 ATKLAPGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELP 69
Query: 369 GTDLVLNEVRILCQVN--HRSLVRLLGCCVELDQTLMIYEYI-PNGTLFDHLHCDFTGKW 425
V EV +L +V+ ++RLL D ++I E P LF DF +
Sbjct: 70 NGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLF-----DFITER 124
Query: 426 PPLPWHLRLVIAHQIAEGLTYLHSAAVPPIYHRDVKSSNILLD-EKLNAKVSDFGLSRLV 484
L L Q+ E + + H+ V HRD+K NIL+D + K+ DFG L+
Sbjct: 125 GALQEELARSFFWQVLEAVRHCHNCGV---LHRDIKDENILIDLNRGELKLIDFGSGALL 181
Query: 485 ERTETNDSHIFTTAQGTMGYLDPEYYRNFQLTDKS-DVYSFGVVLLELLTSKKAIDFNRE 543
+ T ++T GT Y PE+ R + +S V+S G++L +++ I F +
Sbjct: 182 KDT------VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGD--IPFEHD 233
Query: 544 EENVNLVVYMKKIMDEE 560
EE + V+ ++ + E
Sbjct: 234 EEIIRGQVFFRQRVSSE 250
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 70/230 (30%), Positives = 107/230 (46%), Gaps = 38/230 (16%)
Query: 331 NFSKDNL-----IGTGGFGEVFK----GILDDGT--VTAIKRAKLGNTKGTDLVL-NEVR 378
F +D L +G G FG+V + GI T A+K K G T L +E++
Sbjct: 23 EFPRDRLNLGKPLGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELK 82
Query: 379 ILCQVNHR-SLVRLLGCCVELDQTLM-IYEYIPNGTL-------------FDHLHCDFTG 423
IL + H ++V LLG C + LM I E+ G L + L+ DF
Sbjct: 83 ILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDF-- 140
Query: 424 KWPPLPWHLRLVIAHQIAEGLTYLHSAAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRL 483
L + + Q+A+G+ +L S HRD+ + NILL EK K+ DFGL+R
Sbjct: 141 ----LTLEHLICYSFQVAKGMEFLASRKX---IHRDLAARNILLSEKNVVKICDFGLARD 193
Query: 484 VERTETNDSHIFTTAQGTMGYLDPEYYRNFQLTDKSDVYSFGVVLLELLT 533
+ + D A+ + ++ PE + T +SDV+SFGV+L E+ +
Sbjct: 194 IYKDP--DYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 241
>pdb|3F2A|A Chain A, Crystal Structure Of Human Pim-1 In Complex With Dappa
Length = 300
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 71/257 (27%), Positives = 116/257 (45%), Gaps = 28/257 (10%)
Query: 316 SARIFTGKEIRRATNNFSKDNLIGTGGFGEVFKGI-LDDGTVTAIKRAK------LGNTK 368
+ ++ GKE + + L+G+GGFG V+ GI + D AIK + G
Sbjct: 9 ATKLAPGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELP 68
Query: 369 GTDLVLNEVRILCQVN--HRSLVRLLGCCVELDQTLMIYEYI-PNGTLFDHLHCDFTGKW 425
V EV +L +V+ ++RLL D ++I E P LF DF +
Sbjct: 69 NGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLF-----DFITER 123
Query: 426 PPLPWHLRLVIAHQIAEGLTYLHSAAVPPIYHRDVKSSNILLD-EKLNAKVSDFGLSRLV 484
L L Q+ E + + H+ V HRD+K NIL+D + K+ DFG L+
Sbjct: 124 GALQEELARSFFWQVLEAVRHCHNCGV---LHRDIKDENILIDLNRGELKLIDFGSGALL 180
Query: 485 ERTETNDSHIFTTAQGTMGYLDPEYYRNFQLTDKS-DVYSFGVVLLELLTSKKAIDFNRE 543
+ T ++T GT Y PE+ R + +S V+S G++L +++ I F +
Sbjct: 181 KDT------VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGD--IPFEHD 232
Query: 544 EENVNLVVYMKKIMDEE 560
EE + V+ ++ + E
Sbjct: 233 EEIIRGQVFFRQRVSXE 249
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 102/211 (48%), Gaps = 23/211 (10%)
Query: 338 IGTGGFGEVFKGILDD------GTVTAIKRA-KLGNTKGTDLVLNEVRILCQVNHRSLVR 390
+G G FG V++G D T A+K + + + LNE ++ +VR
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 84
Query: 391 LLGCCVELDQTLMIYEYIPNGTLFDHLHC------DFTGKWPPLPWHLRLVIAHQIAEGL 444
LLG + TL++ E + +G L +L + G+ PP + + +A +IA+G+
Sbjct: 85 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEM-IQMAAEIADGM 143
Query: 445 TYLHSAAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDSHIFTTAQGTM-- 502
YL++ HRD+ + N ++ K+ DFG++R + T+ + +G +
Sbjct: 144 AYLNAKK---FVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETD----YYRKGGKGLLPV 196
Query: 503 GYLDPEYYRNFQLTDKSDVYSFGVVLLELLT 533
++ PE ++ T SD++SFGVVL E+ +
Sbjct: 197 RWMAPESLKDGVFTTSSDMWSFGVVLWEITS 227
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 102/211 (48%), Gaps = 23/211 (10%)
Query: 338 IGTGGFGEVFKGILDD------GTVTAIKRA-KLGNTKGTDLVLNEVRILCQVNHRSLVR 390
+G G FG V++G D T A+K + + + LNE ++ +VR
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 84
Query: 391 LLGCCVELDQTLMIYEYIPNGTLFDHLHC------DFTGKWPPLPWHLRLVIAHQIAEGL 444
LLG + TL++ E + +G L +L + G+ PP + + +A +IA+G+
Sbjct: 85 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEM-IQMAAEIADGM 143
Query: 445 TYLHSAAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDSHIFTTAQGTM-- 502
YL++ HRD+ + N ++ K+ DFG++R + T ++ +G +
Sbjct: 144 AYLNAKK---FVHRDLAARNCMVAHDFTVKIGDFGMTRDIYET----AYYRKGGKGLLPV 196
Query: 503 GYLDPEYYRNFQLTDKSDVYSFGVVLLELLT 533
++ PE ++ T SD++SFGVVL E+ +
Sbjct: 197 RWMAPESLKDGVFTTSSDMWSFGVVLWEITS 227
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 102/204 (50%), Gaps = 25/204 (12%)
Query: 338 IGTGGFGEVFKGILDDGTVTAIKRAKLGNTKGTDLV---LNEVRILCQVNHRSLVRLLGC 394
+G G FG+V+K + A+ AK+ TK + + + E+ IL +H +V+LLG
Sbjct: 19 LGDGAFGKVYKA--KNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGA 76
Query: 395 CVELDQTLMIYEYIPNGTL-FDHLHCDFTGKWPPLPWHLRLVIAHQIAEGLTYLHSAAVP 453
+ ++ E+ P G + L D P + V+ Q+ E L +LHS
Sbjct: 77 YYHDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQ-----VVCRQMLEALNFLHSKR-- 129
Query: 454 PIYHRDVKSSNILLDEKLNAKVSDFGLS-RLVERTETNDSHIFTTAQGTMGYLDPEYYRN 512
I HRD+K+ N+L+ + + +++DFG+S + ++ + DS I GT ++ PE
Sbjct: 130 -IIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKTLQKRDSFI-----GTPYWMAPEVVMC 183
Query: 513 FQLTD-----KSDVYSFGVVLLEL 531
+ D K+D++S G+ L+E+
Sbjct: 184 ETMKDTPYDYKADIWSLGITLIEM 207
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 65/235 (27%), Positives = 109/235 (46%), Gaps = 45/235 (19%)
Query: 332 FSKDNL-----IGTGGFGEVFK----GILDD----GTVTAIKRAKLGNTKG--TDLVLNE 376
F +D L +G G FG+V GI D A+K K T+ +DLV +E
Sbjct: 32 FPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEEDLSDLV-SE 90
Query: 377 VRILCQV-NHRSLVRLLGCCVELDQTLMIYEYIPNGTLFDHLHCDFTGKWPP-------- 427
+ ++ + H++++ LLG C + +I EY G L ++L + PP
Sbjct: 91 MEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRA----RRPPGMEYSYDI 146
Query: 428 -------LPWHLRLVIAHQIAEGLTYLHSAAVPPIYHRDVKSSNILLDEKLNAKVSDFGL 480
+ + + +Q+A G+ YL S HRD+ + N+L+ E K++DFGL
Sbjct: 147 NRVPEEQMTFKDLVSCTYQLARGMEYLASQKC---IHRDLAARNVLVTENNVMKIADFGL 203
Query: 481 SRLVERTETNDSHIFTTAQGTM--GYLDPEYYRNFQLTDKSDVYSFGVVLLELLT 533
+R + N + T G + ++ PE + T +SDV+SFGV++ E+ T
Sbjct: 204 ARDI----NNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 102/204 (50%), Gaps = 25/204 (12%)
Query: 338 IGTGGFGEVFKGILDDGTVTAIKRAKLGNTKGTDLV---LNEVRILCQVNHRSLVRLLGC 394
+G G FG+V+K + A+ AK+ TK + + + E+ IL +H +V+LLG
Sbjct: 27 LGDGAFGKVYKA--KNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGA 84
Query: 395 CVELDQTLMIYEYIPNGTLFD-HLHCDFTGKWPPLPWHLRLVIAHQIAEGLTYLHSAAVP 453
+ ++ E+ P G + L D P + V+ Q+ E L +LHS
Sbjct: 85 YYHDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQ-----VVCRQMLEALNFLHSKR-- 137
Query: 454 PIYHRDVKSSNILLDEKLNAKVSDFGLS-RLVERTETNDSHIFTTAQGTMGYLDPEYYRN 512
I HRD+K+ N+L+ + + +++DFG+S + ++ + DS I GT ++ PE
Sbjct: 138 -IIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKTLQKRDSFI-----GTPYWMAPEVVMC 191
Query: 513 FQLTD-----KSDVYSFGVVLLEL 531
+ D K+D++S G+ L+E+
Sbjct: 192 ETMKDTPYDYKADIWSLGITLIEM 215
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 65/235 (27%), Positives = 109/235 (46%), Gaps = 45/235 (19%)
Query: 332 FSKDNL-----IGTGGFGEVFK----GILDD----GTVTAIKRAKLGNTKG--TDLVLNE 376
F +D L +G G FG+V GI D A+K K T+ +DLV +E
Sbjct: 32 FPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLV-SE 90
Query: 377 VRILCQV-NHRSLVRLLGCCVELDQTLMIYEYIPNGTLFDHLHCDFTGKWPP-------- 427
+ ++ + H++++ LLG C + +I EY G L ++L + PP
Sbjct: 91 MEMMKMIGKHKNIITLLGACTQDGPLYVIVEYASKGNLREYLRA----RRPPGMEYSYDI 146
Query: 428 -------LPWHLRLVIAHQIAEGLTYLHSAAVPPIYHRDVKSSNILLDEKLNAKVSDFGL 480
+ + + +Q+A G+ YL S HRD+ + N+L+ E K++DFGL
Sbjct: 147 NRVPEEQMTFKDLVSCTYQLARGMEYLASQKC---IHRDLAARNVLVTENNVMKIADFGL 203
Query: 481 SRLVERTETNDSHIFTTAQGTM--GYLDPEYYRNFQLTDKSDVYSFGVVLLELLT 533
+R + N + T G + ++ PE + T +SDV+SFGV++ E+ T
Sbjct: 204 ARDI----NNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma
Kinase Catalytic Domain
Length = 327
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 66/239 (27%), Positives = 108/239 (45%), Gaps = 23/239 (9%)
Query: 309 NAKAAGKSARIFTGKEIRRATNNFSKDNLIGTGGFGEVFKGILD------DGTVTAIKRA 362
N AGK++ I KE+ R N + +G G FGEV++G + A+K
Sbjct: 12 NYSFAGKTSSISDLKEVPR--KNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTL 69
Query: 363 KLGNTKGTDL-VLNEVRILCQVNHRSLVRLLGCCVELDQTLMIYEYIPNGTLFDHLHCDF 421
++ +L L E I+ ++NH+++VR +G ++ ++ E + G L L
Sbjct: 70 PEVCSEQDELDFLMEALIISKLNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLR--E 127
Query: 422 TGKWPPLPWHLRLV----IAHQIAEGLTYLHSAAVPPIYHRDVKSSNILL---DEKLNAK 474
T P P L ++ +A IA G YL HRD+ + N LL AK
Sbjct: 128 TRPRPSQPSSLAMLDLLHVARDIACGCQYLEENH---FIHRDIAARNCLLTCPGPGRVAK 184
Query: 475 VSDFGLSRLVERTETNDSHIFTTAQGTMGYLDPEYYRNFQLTDKSDVYSFGVVLLELLT 533
+ DFG++R + R A + ++ PE + T K+D +SFGV+L E+ +
Sbjct: 185 IGDFGMARDIYRASYYRKG--GCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 241
>pdb|3JPV|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Pyrrolo[2,3- A]carbazole Ligand
pdb|3QF9|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Furan- Thiazolidinedione Ligand
pdb|4GW8|A Chain A, Human Proto-Oncogene Serine Threonine Kinase (Pim1) In
Complex With A Consensus Peptide And Leucettine L41
Length = 313
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 71/257 (27%), Positives = 116/257 (45%), Gaps = 28/257 (10%)
Query: 316 SARIFTGKEIRRATNNFSKDNLIGTGGFGEVFKGI-LDDGTVTAIKRAK------LGNTK 368
+ ++ GKE + + L+G+GGFG V+ GI + D AIK + G
Sbjct: 23 ATKLAPGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELP 82
Query: 369 GTDLVLNEVRILCQVN--HRSLVRLLGCCVELDQTLMIYEYI-PNGTLFDHLHCDFTGKW 425
V EV +L +V+ ++RLL D ++I E P LF DF +
Sbjct: 83 NGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLF-----DFITER 137
Query: 426 PPLPWHLRLVIAHQIAEGLTYLHSAAVPPIYHRDVKSSNILLD-EKLNAKVSDFGLSRLV 484
L L Q+ E + + H+ V HRD+K NIL+D + K+ DFG L+
Sbjct: 138 GALQEELARSFFWQVLEAVRHCHNCGV---LHRDIKDENILIDLNRGELKLIDFGSGALL 194
Query: 485 ERTETNDSHIFTTAQGTMGYLDPEYYRNFQLTDKS-DVYSFGVVLLELLTSKKAIDFNRE 543
+ T ++T GT Y PE+ R + +S V+S G++L +++ I F +
Sbjct: 195 KDT------VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGD--IPFEHD 246
Query: 544 EENVNLVVYMKKIMDEE 560
EE + V+ ++ + E
Sbjct: 247 EEIIGGQVFFRQRVSSE 263
>pdb|2XIY|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-2 From
Crystallographic Fragment Screen
pdb|2XIZ|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-3 From
Crystallographic Fragment Screen
pdb|2XJ1|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inibitor
pdb|2XJ2|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inhibitor
Length = 301
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 71/257 (27%), Positives = 116/257 (45%), Gaps = 28/257 (10%)
Query: 316 SARIFTGKEIRRATNNFSKDNLIGTGGFGEVFKGI-LDDGTVTAIKRAK------LGNTK 368
+ ++ GKE + + L+G+GGFG V+ GI + D AIK + G
Sbjct: 10 ATKLAPGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELP 69
Query: 369 GTDLVLNEVRILCQVN--HRSLVRLLGCCVELDQTLMIYEYI-PNGTLFDHLHCDFTGKW 425
V EV +L +V+ ++RLL D ++I E P LF DF +
Sbjct: 70 NGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLF-----DFITER 124
Query: 426 PPLPWHLRLVIAHQIAEGLTYLHSAAVPPIYHRDVKSSNILLD-EKLNAKVSDFGLSRLV 484
L L Q+ E + + H+ V HRD+K NIL+D + K+ DFG L+
Sbjct: 125 GALQEELARSFFWQVLEAVRHCHNCGV---LHRDIKDENILIDLNRGELKLIDFGSGALL 181
Query: 485 ERTETNDSHIFTTAQGTMGYLDPEYYRNFQLTDKS-DVYSFGVVLLELLTSKKAIDFNRE 543
+ T ++T GT Y PE+ R + +S V+S G++L +++ I F +
Sbjct: 182 KDT------VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGD--IPFEHD 233
Query: 544 EENVNLVVYMKKIMDEE 560
EE + V+ ++ + E
Sbjct: 234 EEIIRGQVFFRQRVSXE 250
>pdb|2BIL|B Chain B, The Human Protein Kinase Pim1 In Complex With Its
Consensus Peptide Pimtide
pdb|2BZJ|A Chain A, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru3
pdb|2BZK|B Chain B, Crystal Structure Of The Human Pim1 In Complex With Amppnp
And Pimtide
pdb|2C3I|B Chain B, Crystal Structure Of Human Pim1 In Complex With
Imidazopyridazin I
pdb|2BZH|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2OI4|X Chain X, Crystal Structure Of Human Pim1 In Complex With
Fluorinated Ruthenium Pyridocarbazole
pdb|3BWF|A Chain A, Crystal Structure Of The Human Pim1 In Complex With An
Osmium Compound
Length = 313
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 71/257 (27%), Positives = 116/257 (45%), Gaps = 28/257 (10%)
Query: 316 SARIFTGKEIRRATNNFSKDNLIGTGGFGEVFKGI-LDDGTVTAIKRAK------LGNTK 368
+ ++ GKE + + L+G+GGFG V+ GI + D AIK + G
Sbjct: 22 ATKLAPGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELP 81
Query: 369 GTDLVLNEVRILCQVN--HRSLVRLLGCCVELDQTLMIYEYI-PNGTLFDHLHCDFTGKW 425
V EV +L +V+ ++RLL D ++I E P LF DF +
Sbjct: 82 NGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLF-----DFITER 136
Query: 426 PPLPWHLRLVIAHQIAEGLTYLHSAAVPPIYHRDVKSSNILLD-EKLNAKVSDFGLSRLV 484
L L Q+ E + + H+ V HRD+K NIL+D + K+ DFG L+
Sbjct: 137 GALQEELARSFFWQVLEAVRHCHNCGV---LHRDIKDENILIDLNRGELKLIDFGSGALL 193
Query: 485 ERTETNDSHIFTTAQGTMGYLDPEYYRNFQLTDKS-DVYSFGVVLLELLTSKKAIDFNRE 543
+ T ++T GT Y PE+ R + +S V+S G++L +++ I F +
Sbjct: 194 KDT------VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGD--IPFEHD 245
Query: 544 EENVNLVVYMKKIMDEE 560
EE + V+ ++ + E
Sbjct: 246 EEIIGGQVFFRQRVSSE 262
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 57/201 (28%), Positives = 93/201 (46%), Gaps = 12/201 (5%)
Query: 338 IGTGGFGEVFK-GILDDGTVTAIKRAKLGNTKGTD--LVLNEVRILCQVNHRSLVRLLGC 394
IGTG +G K DG + K G+ + ++++EV +L ++ H ++VR
Sbjct: 14 IGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDR 73
Query: 395 CVELDQTLM--IYEYIPNGTLFDHLHCDFTGKWPPLPWHLRLVIAHQIAEGLTYLH--SA 450
++ T + + EY G L + T + L L + Q+ L H S
Sbjct: 74 IIDRTNTTLYIVMEYCEGGDLASVI-TKGTKERQYLDEEFVLRVMTQLTLALKECHRRSD 132
Query: 451 AVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDSHIFTTAQGTMGYLDPEYY 510
+ HRD+K +N+ LD K N K+ DFGL+R++ +D+ GT Y+ PE
Sbjct: 133 GGHTVLHRDLKPANVFLDGKQNVKLGDFGLARIL----NHDTSFAKAFVGTPYYMSPEQM 188
Query: 511 RNFQLTDKSDVYSFGVVLLEL 531
+KSD++S G +L EL
Sbjct: 189 NRMSYNEKSDIWSLGCLLYEL 209
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 94/218 (43%), Gaps = 18/218 (8%)
Query: 328 ATNNFSKDNLIGTGGFGEVFKGILDDGT-VTAIK---RAKLGNTKGTDLVLNEVRILCQV 383
A +F +G G FG V+ + + A+K +A+L + EV I +
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKNSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 384 NHRSLVRLLGCCVELDQTLMIYEYIPNGTLFDHLHCDFTGKWPPLPWHLRLVIAHQIAEG 443
H +++RL G + + +I EY P GT++ L K ++A
Sbjct: 66 RHPNILRLYGYFHDSTRVYLILEYAPLGTVYRELQ-----KLSKFDEQRTATYITELANA 120
Query: 444 LTYLHSAAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDSHIFTTAQGTMG 503
L+Y HS V HRD+K N+LL K++DFG S V + + + GT+
Sbjct: 121 LSYCHSKKV---IHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRAALC----GTLD 171
Query: 504 YLDPEYYRNFQLTDKSDVYSFGVVLLELLTSKKAIDFN 541
YL PE +K D++S GV+ E L K + N
Sbjct: 172 YLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN 209
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 61/205 (29%), Positives = 98/205 (47%), Gaps = 18/205 (8%)
Query: 338 IGTGGFGEVFKGILD-----DGTVTAIKRAK--LGNTKGTDLVLNEVRILCQVNHRSLVR 390
+G G FG+V D G A+K K G DL E+ IL + H ++V+
Sbjct: 29 LGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLK-KEIEILRNLYHENIVK 87
Query: 391 LLGCCVE--LDQTLMIYEYIPNGTLFDHLHCDFTGKWPPLPWHLRLVIAHQIAEGLTYLH 448
G C E + +I E++P+G+L ++L + + +L A QI +G+ YL
Sbjct: 88 YKGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKN----KINLKQQLKYAVQICKGMDYLG 143
Query: 449 SAAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDSHIFTTAQGTMGYLDPE 508
S HRD+ + N+L++ + K+ DFGL++ +E T+ + + + PE
Sbjct: 144 SRQY---VHRDLAARNVLVESEHQVKIGDFGLTKAIE-TDKEXXTVKDDRDSPVFWYAPE 199
Query: 509 YYRNFQLTDKSDVYSFGVVLLELLT 533
+ SDV+SFGV L ELLT
Sbjct: 200 CLMQSKFYIASDVWSFGVTLHELLT 224
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 101/203 (49%), Gaps = 15/203 (7%)
Query: 338 IGTGGFGEV----FKGILDD-GTVTAIKRAKLGNTKGTDLVLNEVRILCQVNHRSLVRLL 392
+G G FG V + + D+ G + A+K+ + E++IL ++ +V+
Sbjct: 19 LGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYR 78
Query: 393 GCCVELD-QTL-MIYEYIPNGTLFDHLHCDFTGKWPPLPWHLRLVIAHQIAEGLTYLHSA 450
G Q+L ++ EY+P+G L D L L L+ + QI +G+ YL S
Sbjct: 79 GVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRAR----LDASRLLLYSSQICKGMEYLGSR 134
Query: 451 AVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDSHIFTTAQGTMGYLDPEYY 510
HRD+ + NIL++ + + K++DFGL++L+ + + + Q + + PE
Sbjct: 135 RC---VHRDLAARNILVESEAHVKIADFGLAKLLP-LDKDYYVVREPGQSPIFWYAPESL 190
Query: 511 RNFQLTDKSDVYSFGVVLLELLT 533
+ + +SDV+SFGVVL EL T
Sbjct: 191 SDNIFSRQSDVWSFGVVLYELFT 213
>pdb|3CXW|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand I
pdb|3CY2|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand Ii
Length = 314
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 71/257 (27%), Positives = 116/257 (45%), Gaps = 28/257 (10%)
Query: 316 SARIFTGKEIRRATNNFSKDNLIGTGGFGEVFKGI-LDDGTVTAIKRAK------LGNTK 368
+ ++ GKE + + L+G+GGFG V+ GI + D AIK + G
Sbjct: 23 ATKLAPGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELP 82
Query: 369 GTDLVLNEVRILCQVN--HRSLVRLLGCCVELDQTLMIYEYI-PNGTLFDHLHCDFTGKW 425
V EV +L +V+ ++RLL D ++I E P LF DF +
Sbjct: 83 NGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLF-----DFITER 137
Query: 426 PPLPWHLRLVIAHQIAEGLTYLHSAAVPPIYHRDVKSSNILLD-EKLNAKVSDFGLSRLV 484
L L Q+ E + + H+ V HRD+K NIL+D + K+ DFG L+
Sbjct: 138 GALQEELARSFFWQVLEAVRHCHNCGV---LHRDIKDENILIDLNRGELKLIDFGSGALL 194
Query: 485 ERTETNDSHIFTTAQGTMGYLDPEYYRNFQLTDKS-DVYSFGVVLLELLTSKKAIDFNRE 543
+ T ++T GT Y PE+ R + +S V+S G++L +++ I F +
Sbjct: 195 KDT------VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGD--IPFEHD 246
Query: 544 EENVNLVVYMKKIMDEE 560
EE + V+ ++ + E
Sbjct: 247 EEIIGGQVFFRQRVSSE 263
>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|2P0C|B Chain B, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|3BRB|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BRB|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BPR|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|C Chain C, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|D Chain D, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3TCP|A Chain A, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
pdb|3TCP|B Chain B, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
Length = 313
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 102/210 (48%), Gaps = 17/210 (8%)
Query: 336 NLIGTGGFGEVFKGIL--DDGTV--TAIKRAKLGNTKGTDL--VLNEVRILCQVNHRSLV 389
++G G FG V +G L +DGT A+K KL N+ ++ L+E + +H +++
Sbjct: 40 KILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVI 99
Query: 390 RLLGCCVELD-----QTLMIYEYIPNGTLFDHLHCDFTGKWPP-LPWHLRLVIAHQIAEG 443
RLLG C+E+ + ++I ++ G L +L P +P L IA G
Sbjct: 100 RLLGVCIEMSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALG 159
Query: 444 LTYLHSAAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDSHIFTTAQGTMG 503
+ YL + HRD+ + N +L + + V+DFGLS+ + + A+ +
Sbjct: 160 MEYLSNRN---FLHRDLAARNCMLRDDMTVCVADFGLSKKIYSGDYYRQG--RIAKMPVK 214
Query: 504 YLDPEYYRNFQLTDKSDVYSFGVVLLELLT 533
++ E + T KSDV++FGV + E+ T
Sbjct: 215 WIAIESLADRVYTSKSDVWAFGVTMWEIAT 244
>pdb|2J2I|B Chain B, Crystal Structure Of The Humab Pim1 In Complex With
Ly333531
Length = 312
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 71/257 (27%), Positives = 116/257 (45%), Gaps = 28/257 (10%)
Query: 316 SARIFTGKEIRRATNNFSKDNLIGTGGFGEVFKGI-LDDGTVTAIKRAK------LGNTK 368
+ ++ GKE + + L+G+GGFG V+ GI + D AIK + G
Sbjct: 22 ATKLAPGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELP 81
Query: 369 GTDLVLNEVRILCQVN--HRSLVRLLGCCVELDQTLMIYEYI-PNGTLFDHLHCDFTGKW 425
V EV +L +V+ ++RLL D ++I E P LF DF +
Sbjct: 82 NGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLF-----DFITER 136
Query: 426 PPLPWHLRLVIAHQIAEGLTYLHSAAVPPIYHRDVKSSNILLD-EKLNAKVSDFGLSRLV 484
L L Q+ E + + H+ V HRD+K NIL+D + K+ DFG L+
Sbjct: 137 GALQEELARSFFWQVLEAVRHCHNCGV---LHRDIKDENILIDLNRGELKLIDFGSGALL 193
Query: 485 ERTETNDSHIFTTAQGTMGYLDPEYYRNFQLTDKS-DVYSFGVVLLELLTSKKAIDFNRE 543
+ T ++T GT Y PE+ R + +S V+S G++L +++ I F +
Sbjct: 194 KDT------VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGD--IPFEHD 245
Query: 544 EENVNLVVYMKKIMDEE 560
EE + V+ ++ + E
Sbjct: 246 EEIIGGQVFFRQRVSSE 262
>pdb|2XIX|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-1 From
Crystallographic Fragment Screen
Length = 301
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 71/257 (27%), Positives = 116/257 (45%), Gaps = 28/257 (10%)
Query: 316 SARIFTGKEIRRATNNFSKDNLIGTGGFGEVFKGI-LDDGTVTAIKRAK------LGNTK 368
+ ++ GKE + + L+G+GGFG V+ GI + D AIK + G
Sbjct: 10 ATKLAPGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELP 69
Query: 369 GTDLVLNEVRILCQVN--HRSLVRLLGCCVELDQTLMIYEYI-PNGTLFDHLHCDFTGKW 425
V EV +L +V+ ++RLL D ++I E P LF DF +
Sbjct: 70 NGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLF-----DFITER 124
Query: 426 PPLPWHLRLVIAHQIAEGLTYLHSAAVPPIYHRDVKSSNILLD-EKLNAKVSDFGLSRLV 484
L L Q+ E + + H+ V HRD+K NIL+D + K+ DFG L+
Sbjct: 125 GALQEELARSFFWQVLEAVRHCHNCGV---LHRDIKDENILIDLNRGELKLIDFGSGALL 181
Query: 485 ERTETNDSHIFTTAQGTMGYLDPEYYRNFQLTDKS-DVYSFGVVLLELLTSKKAIDFNRE 543
+ T ++T GT Y PE+ R + +S V+S G++L +++ I F +
Sbjct: 182 KDT------VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGD--IPFEHD 233
Query: 544 EENVNLVVYMKKIMDEE 560
EE + V+ ++ + E
Sbjct: 234 EEIIRGQVFFRQRVSXE 250
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 67/215 (31%), Positives = 98/215 (45%), Gaps = 21/215 (9%)
Query: 331 NFSKDNLIGTGGFGEV--FKGILDDGTVTAIKRAKLGNTKGTDL--VLNEVRILCQVNHR 386
N+ IG G F +V + IL G AIK T L + EVRI+ +NH
Sbjct: 13 NYRLLKTIGKGNFAKVKLARHILT-GREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHP 71
Query: 387 SLVRLLGCCVELDQTL-MIYEYIPNGTLFDHLHCDFTGKWPPLPWHLRLVIAHQIAEGLT 445
++V+L +E ++TL +I EY G +FD+L K R QI +
Sbjct: 72 NIVKLFEV-IETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARSKFR-----QIVSAVQ 125
Query: 446 YLHSAAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDSHIFTTAQGTMGYL 505
Y H I HRD+K+ N+LLD +N K++DFG S E T G+ Y
Sbjct: 126 YCHQKR---IVHRDLKAENLLLDADMNIKIADFGFS-----NEFTVGGKLDTFCGSPPYA 177
Query: 506 DPEYYRNFQLTD-KSDVYSFGVVLLELLTSKKAID 539
PE ++ + + DV+S GV+L L++ D
Sbjct: 178 APELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFD 212
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 103/221 (46%), Gaps = 34/221 (15%)
Query: 338 IGTGGFGEVFK----GILDDG----TVTAIKRAKLGNT-KGTDLVLNEVRILCQV-NHRS 387
+G G FG+V G+ D T A+K K T K +++E+ ++ + H++
Sbjct: 21 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 80
Query: 388 LVRLLGCCVELDQTLMIYEYIPNGTLFDHLHCDFTGKWPP---------------LPWHL 432
++ LLG C + +I EY G L ++L + PP L
Sbjct: 81 IINLLGACTQDGPLYVIVEYASKGNLREYLQ----ARRPPGLEYCYNPSHNPEEQLSSKD 136
Query: 433 RLVIAHQIAEGLTYLHSAAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDS 492
+ A+Q+A G+ YL S HRD+ + N+L+ E K++DFGL+R + +
Sbjct: 137 LVSCAYQVARGMEYLASKKC---IHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKK 193
Query: 493 HIFTTAQGTMGYLDPEYYRNFQLTDKSDVYSFGVVLLELLT 533
T + + ++ PE + T +SDV+SFGV+L E+ T
Sbjct: 194 --TTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 232
>pdb|3CY3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And
The Jnk Inhibitor V
Length = 314
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 71/257 (27%), Positives = 116/257 (45%), Gaps = 28/257 (10%)
Query: 316 SARIFTGKEIRRATNNFSKDNLIGTGGFGEVFKGI-LDDGTVTAIKRAK------LGNTK 368
+ ++ GKE + + L+G+GGFG V+ GI + D AIK + G
Sbjct: 23 ATKLAPGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELP 82
Query: 369 GTDLVLNEVRILCQVN--HRSLVRLLGCCVELDQTLMIYEYI-PNGTLFDHLHCDFTGKW 425
V EV +L +V+ ++RLL D ++I E P LF DF +
Sbjct: 83 NGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLF-----DFITER 137
Query: 426 PPLPWHLRLVIAHQIAEGLTYLHSAAVPPIYHRDVKSSNILLD-EKLNAKVSDFGLSRLV 484
L L Q+ E + + H+ V HRD+K NIL+D + K+ DFG L+
Sbjct: 138 GALQEELARSFFWQVLEAVRHCHNCGV---LHRDIKDENILIDLNRGELKLIDFGSGALL 194
Query: 485 ERTETNDSHIFTTAQGTMGYLDPEYYRNFQLTDKS-DVYSFGVVLLELLTSKKAIDFNRE 543
+ T ++T GT Y PE+ R + +S V+S G++L +++ I F +
Sbjct: 195 KDT------VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGD--IPFEHD 246
Query: 544 EENVNLVVYMKKIMDEE 560
EE + V+ ++ + E
Sbjct: 247 EEIIGGQVFFRQRVSXE 263
>pdb|1XWS|A Chain A, Crystal Structure Of The Human Pim1 Kinase Domain
Length = 313
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 71/257 (27%), Positives = 116/257 (45%), Gaps = 28/257 (10%)
Query: 316 SARIFTGKEIRRATNNFSKDNLIGTGGFGEVFKGI-LDDGTVTAIKRAK------LGNTK 368
+ ++ GKE + + L+G+GGFG V+ GI + D AIK + G
Sbjct: 22 ATKLAPGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELP 81
Query: 369 GTDLVLNEVRILCQVN--HRSLVRLLGCCVELDQTLMIYEYI-PNGTLFDHLHCDFTGKW 425
V EV +L +V+ ++RLL D ++I E P LF DF +
Sbjct: 82 NGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLF-----DFITER 136
Query: 426 PPLPWHLRLVIAHQIAEGLTYLHSAAVPPIYHRDVKSSNILLD-EKLNAKVSDFGLSRLV 484
L L Q+ E + + H+ V HRD+K NIL+D + K+ DFG L+
Sbjct: 137 GALQEELARSFFWQVLEAVRHCHNCGV---LHRDIKDENILIDLNRGELKLIDFGSGALL 193
Query: 485 ERTETNDSHIFTTAQGTMGYLDPEYYRNFQLTDKS-DVYSFGVVLLELLTSKKAIDFNRE 543
+ T ++T GT Y PE+ R + +S V+S G++L +++ I F +
Sbjct: 194 KDT------VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGD--IPFEHD 245
Query: 544 EENVNLVVYMKKIMDEE 560
EE + V+ ++ + E
Sbjct: 246 EEIIRGQVFFRQRVSSE 262
>pdb|2BIK|B Chain B, Human Pim1 Phosphorylated On Ser261
pdb|2BZI|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru2
Length = 313
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 71/257 (27%), Positives = 116/257 (45%), Gaps = 28/257 (10%)
Query: 316 SARIFTGKEIRRATNNFSKDNLIGTGGFGEVFKGI-LDDGTVTAIKRAK------LGNTK 368
+ ++ GKE + + L+G+GGFG V+ GI + D AIK + G
Sbjct: 22 ATKLAPGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELP 81
Query: 369 GTDLVLNEVRILCQVN--HRSLVRLLGCCVELDQTLMIYEYI-PNGTLFDHLHCDFTGKW 425
V EV +L +V+ ++RLL D ++I E P LF DF +
Sbjct: 82 NGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLF-----DFITER 136
Query: 426 PPLPWHLRLVIAHQIAEGLTYLHSAAVPPIYHRDVKSSNILLD-EKLNAKVSDFGLSRLV 484
L L Q+ E + + H+ V HRD+K NIL+D + K+ DFG L+
Sbjct: 137 GALQEELARSFFWQVLEAVRHCHNCGV---LHRDIKDENILIDLNRGELKLIDFGSGALL 193
Query: 485 ERTETNDSHIFTTAQGTMGYLDPEYYRNFQLTDKS-DVYSFGVVLLELLTSKKAIDFNRE 543
+ T ++T GT Y PE+ R + +S V+S G++L +++ I F +
Sbjct: 194 KDT------VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGD--IPFEHD 245
Query: 544 EENVNLVVYMKKIMDEE 560
EE + V+ ++ + E
Sbjct: 246 EEIIGGQVFFRQRVSXE 262
>pdb|2OBJ|A Chain A, Crystal Structure Of Human Pim-1 Kinase In Complex With
Inhibitor
pdb|3BGP|A Chain A, Human Pim-1 Complexed With A Benzoisoxazole Inhibitor Vx1
pdb|3BGQ|A Chain A, Human Pim-1 Kinase In Complex With An Triazolo Pyridazine
Inhibitor Vx2
pdb|3BGZ|A Chain A, Human Pim-1 Kinase In Complex With Diphenyl Indole
Inhibitor Vx3
Length = 333
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 71/257 (27%), Positives = 116/257 (45%), Gaps = 28/257 (10%)
Query: 316 SARIFTGKEIRRATNNFSKDNLIGTGGFGEVFKGI-LDDGTVTAIKRAK------LGNTK 368
+ ++ GKE + + L+G+GGFG V+ GI + D AIK + G
Sbjct: 42 ATKLAPGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELP 101
Query: 369 GTDLVLNEVRILCQVN--HRSLVRLLGCCVELDQTLMIYEYI-PNGTLFDHLHCDFTGKW 425
V EV +L +V+ ++RLL D ++I E P LF DF +
Sbjct: 102 NGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLF-----DFITER 156
Query: 426 PPLPWHLRLVIAHQIAEGLTYLHSAAVPPIYHRDVKSSNILLD-EKLNAKVSDFGLSRLV 484
L L Q+ E + + H+ V HRD+K NIL+D + K+ DFG L+
Sbjct: 157 GALQEELARSFFWQVLEAVRHCHNCGV---LHRDIKDENILIDLNRGELKLIDFGSGALL 213
Query: 485 ERTETNDSHIFTTAQGTMGYLDPEYYRNFQLTDKS-DVYSFGVVLLELLTSKKAIDFNRE 543
+ T ++T GT Y PE+ R + +S V+S G++L +++ I F +
Sbjct: 214 KDT------VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGD--IPFEHD 265
Query: 544 EENVNLVVYMKKIMDEE 560
EE + V+ ++ + E
Sbjct: 266 EEIIRGQVFFRQRVSXE 282
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 103/221 (46%), Gaps = 34/221 (15%)
Query: 338 IGTGGFGEVFK----GILDDG----TVTAIKRAKLGNT-KGTDLVLNEVRILCQV-NHRS 387
+G G FG+V G+ D T A+K K T K +++E+ ++ + H++
Sbjct: 29 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 88
Query: 388 LVRLLGCCVELDQTLMIYEYIPNGTLFDHLHCDFTGKWPP---------------LPWHL 432
++ LLG C + +I EY G L ++L + PP L
Sbjct: 89 IINLLGACTQDGPLYVIVEYASKGNLREYLQA----RRPPGLEYSYNPSHNPEEQLSSKD 144
Query: 433 RLVIAHQIAEGLTYLHSAAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDS 492
+ A+Q+A G+ YL S HRD+ + N+L+ E K++DFGL+R + +
Sbjct: 145 LVSCAYQVARGMEYLASKKC---IHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKK 201
Query: 493 HIFTTAQGTMGYLDPEYYRNFQLTDKSDVYSFGVVLLELLT 533
T + + ++ PE + T +SDV+SFGV+L E+ T
Sbjct: 202 --TTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 240
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 101/203 (49%), Gaps = 15/203 (7%)
Query: 338 IGTGGFGEV----FKGILDD-GTVTAIKRAKLGNTKGTDLVLNEVRILCQVNHRSLVRLL 392
+G G FG V + + D+ G + A+K+ + E++IL ++ +V+
Sbjct: 18 LGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYR 77
Query: 393 GCCVELD-QTL-MIYEYIPNGTLFDHLHCDFTGKWPPLPWHLRLVIAHQIAEGLTYLHSA 450
G Q+L ++ EY+P+G L D L L L+ + QI +G+ YL S
Sbjct: 78 GVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRAR----LDASRLLLYSSQICKGMEYLGSR 133
Query: 451 AVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDSHIFTTAQGTMGYLDPEYY 510
HRD+ + NIL++ + + K++DFGL++L+ + + + Q + + PE
Sbjct: 134 RC---VHRDLAARNILVESEAHVKIADFGLAKLLP-LDKDYYVVREPGQSPIFWYAPESL 189
Query: 511 RNFQLTDKSDVYSFGVVLLELLT 533
+ + +SDV+SFGVVL EL T
Sbjct: 190 SDNIFSRQSDVWSFGVVLYELFT 212
>pdb|3MA3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Naphtho-Difuran Ligand
Length = 313
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 71/257 (27%), Positives = 116/257 (45%), Gaps = 28/257 (10%)
Query: 316 SARIFTGKEIRRATNNFSKDNLIGTGGFGEVFKGI-LDDGTVTAIKRAK------LGNTK 368
+ ++ GKE + + L+G+GGFG V+ GI + D AIK + G
Sbjct: 23 ATKLAPGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELP 82
Query: 369 GTDLVLNEVRILCQVN--HRSLVRLLGCCVELDQTLMIYEYI-PNGTLFDHLHCDFTGKW 425
V EV +L +V+ ++RLL D ++I E P LF DF +
Sbjct: 83 NGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLF-----DFITER 137
Query: 426 PPLPWHLRLVIAHQIAEGLTYLHSAAVPPIYHRDVKSSNILLD-EKLNAKVSDFGLSRLV 484
L L Q+ E + + H+ V HRD+K NIL+D + K+ DFG L+
Sbjct: 138 GALQEELARSFFWQVLEAVRHCHNCGV---LHRDIKDENILIDLNRGELKLIDFGSGALL 194
Query: 485 ERTETNDSHIFTTAQGTMGYLDPEYYRNFQLTDKS-DVYSFGVVLLELLTSKKAIDFNRE 543
+ T ++T GT Y PE+ R + +S V+S G++L +++ I F +
Sbjct: 195 KDT------VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGD--IPFEHD 246
Query: 544 EENVNLVVYMKKIMDEE 560
EE + V+ ++ + E
Sbjct: 247 EEIIGGQVFFRQRVSXE 263
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 103/221 (46%), Gaps = 34/221 (15%)
Query: 338 IGTGGFGEVFK----GILDDG----TVTAIKRAKLGNT-KGTDLVLNEVRILCQV-NHRS 387
+G G FG+V G+ D T A+K K T K +++E+ ++ + H++
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 95
Query: 388 LVRLLGCCVELDQTLMIYEYIPNGTLFDHLHCDFTGKWPP---------------LPWHL 432
++ LLG C + +I EY G L ++L + PP L
Sbjct: 96 IINLLGACTQDGPLYVIVEYASKGNLREYLQA----RRPPGLEYSYNPSHNPEEQLSSKD 151
Query: 433 RLVIAHQIAEGLTYLHSAAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDS 492
+ A+Q+A G+ YL S HRD+ + N+L+ E K++DFGL+R + +
Sbjct: 152 LVSCAYQVARGMEYLASKKC---IHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKK 208
Query: 493 HIFTTAQGTMGYLDPEYYRNFQLTDKSDVYSFGVVLLELLT 533
T + + ++ PE + T +SDV+SFGV+L E+ T
Sbjct: 209 --TTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 247
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 96/219 (43%), Gaps = 45/219 (20%)
Query: 338 IGTGGFGEVF----KGILDDGTVTAIKRAKLGNTKGTD----------LVLNEVRILCQV 383
+G+G +GEV K + + IK+++ + +D + NE+ +L +
Sbjct: 44 LGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKSL 103
Query: 384 NHRSLVRLLGCCVELDQTLMIYEYIPNGTLFDHL-------HCDFTGKWPPLPWHLRLVI 436
+H ++++L + ++ E+ G LF+ + CD I
Sbjct: 104 DHPNIIKLFDVFEDKKYFYLVTEFYEGGELFEQIINRHKFDECDAAN------------I 151
Query: 437 AHQIAEGLTYLHSAAVPPIYHRDVKSSNILLDEK---LNAKVSDFGLSRLVERTETNDSH 493
QI G+ YLH I HRD+K NILL+ K LN K+ DFGLS + +
Sbjct: 152 MKQILSGICYLHK---HNIVHRDIKPENILLENKNSLLNIKIVDFGLSSFFSK-----DY 203
Query: 494 IFTTAQGTMGYLDPEYYRNFQLTDKSDVYSFGVVLLELL 532
GT Y+ PE + + +K DV+S GV++ LL
Sbjct: 204 KLRDRLGTAYYIAPEVLKK-KYNEKCDVWSCGVIMYILL 241
>pdb|3DCV|A Chain A, Crystal Structure Of Human Pim1 Kinase Complexed With
4-(4-
Hydroxy-3-Methyl-Phenyl)-6-Phenylpyrimidin-2(1h)-One
pdb|3T9I|A Chain A, Pim1 Complexed With A Novel 3,6-Disubstituted Indole At
2.6 Ang Resolution
Length = 328
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 71/257 (27%), Positives = 116/257 (45%), Gaps = 28/257 (10%)
Query: 316 SARIFTGKEIRRATNNFSKDNLIGTGGFGEVFKGI-LDDGTVTAIKRAK------LGNTK 368
+ ++ GKE + + L+G+GGFG V+ GI + D AIK + G
Sbjct: 37 ATKLAPGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELP 96
Query: 369 GTDLVLNEVRILCQVN--HRSLVRLLGCCVELDQTLMIYEYI-PNGTLFDHLHCDFTGKW 425
V EV +L +V+ ++RLL D ++I E P LF DF +
Sbjct: 97 NGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLF-----DFITER 151
Query: 426 PPLPWHLRLVIAHQIAEGLTYLHSAAVPPIYHRDVKSSNILLD-EKLNAKVSDFGLSRLV 484
L L Q+ E + + H+ V HRD+K NIL+D + K+ DFG L+
Sbjct: 152 GALQEELARSFFWQVLEAVRHCHNCGV---LHRDIKDENILIDLNRGELKLIDFGSGALL 208
Query: 485 ERTETNDSHIFTTAQGTMGYLDPEYYRNFQLTDKS-DVYSFGVVLLELLTSKKAIDFNRE 543
+ T ++T GT Y PE+ R + +S V+S G++L +++ I F +
Sbjct: 209 KDT------VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGD--IPFEHD 260
Query: 544 EENVNLVVYMKKIMDEE 560
EE + V+ ++ + E
Sbjct: 261 EEIIRGQVFFRQRVSXE 277
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 103/221 (46%), Gaps = 34/221 (15%)
Query: 338 IGTGGFGEVFK----GILDDG----TVTAIKRAKLGNT-KGTDLVLNEVRILCQV-NHRS 387
+G G FG+V G+ D T A+K K T K +++E+ ++ + H++
Sbjct: 28 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 87
Query: 388 LVRLLGCCVELDQTLMIYEYIPNGTLFDHLHCDFTGKWPP---------------LPWHL 432
++ LLG C + +I EY G L ++L + PP L
Sbjct: 88 IINLLGACTQDGPLYVIVEYASKGNLREYLQA----RRPPGLEYSYNPSHNPEEQLSSKD 143
Query: 433 RLVIAHQIAEGLTYLHSAAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDS 492
+ A+Q+A G+ YL S HRD+ + N+L+ E K++DFGL+R + +
Sbjct: 144 LVSCAYQVARGMEYLASKKC---IHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKK 200
Query: 493 HIFTTAQGTMGYLDPEYYRNFQLTDKSDVYSFGVVLLELLT 533
T + + ++ PE + T +SDV+SFGV+L E+ T
Sbjct: 201 --TTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 239
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 103/221 (46%), Gaps = 34/221 (15%)
Query: 338 IGTGGFGEVFK----GILDDG----TVTAIKRAKLGNT-KGTDLVLNEVRILCQV-NHRS 387
+G G FG+V G+ D T A+K K T K +++E+ ++ + H++
Sbjct: 25 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 84
Query: 388 LVRLLGCCVELDQTLMIYEYIPNGTLFDHLHCDFTGKWPP---------------LPWHL 432
++ LLG C + +I EY G L ++L + PP L
Sbjct: 85 IINLLGACTQDGPLYVIVEYASKGNLREYLQA----RRPPGLEYSYNPSHNPEEQLSSKD 140
Query: 433 RLVIAHQIAEGLTYLHSAAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDS 492
+ A+Q+A G+ YL S HRD+ + N+L+ E K++DFGL+R + +
Sbjct: 141 LVSCAYQVARGMEYLASKKC---IHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKK 197
Query: 493 HIFTTAQGTMGYLDPEYYRNFQLTDKSDVYSFGVVLLELLT 533
T + + ++ PE + T +SDV+SFGV+L E+ T
Sbjct: 198 --TTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 236
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 61/205 (29%), Positives = 98/205 (47%), Gaps = 18/205 (8%)
Query: 338 IGTGGFGEVFKGILD-----DGTVTAIKRAK--LGNTKGTDLVLNEVRILCQVNHRSLVR 390
+G G FG+V D G A+K K G DL E+ IL + H ++V+
Sbjct: 17 LGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLK-KEIEILRNLYHENIVK 75
Query: 391 LLGCCVE--LDQTLMIYEYIPNGTLFDHLHCDFTGKWPPLPWHLRLVIAHQIAEGLTYLH 448
G C E + +I E++P+G+L ++L + + +L A QI +G+ YL
Sbjct: 76 YKGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKN----KINLKQQLKYAVQICKGMDYLG 131
Query: 449 SAAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDSHIFTTAQGTMGYLDPE 508
S HRD+ + N+L++ + K+ DFGL++ +E T+ + + + PE
Sbjct: 132 SRQY---VHRDLAARNVLVESEHQVKIGDFGLTKAIE-TDKEXXTVKDDRDSPVFWYAPE 187
Query: 509 YYRNFQLTDKSDVYSFGVVLLELLT 533
+ SDV+SFGV L ELLT
Sbjct: 188 CLMQSKFYIASDVWSFGVTLHELLT 212
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 103/221 (46%), Gaps = 34/221 (15%)
Query: 338 IGTGGFGEVFK----GILDDG----TVTAIKRAKLGNT-KGTDLVLNEVRILCQV-NHRS 387
+G G FG+V G+ D T A+K K T K +++E+ ++ + H++
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 95
Query: 388 LVRLLGCCVELDQTLMIYEYIPNGTLFDHLHCDFTGKWPP---------------LPWHL 432
++ LLG C + +I EY G L ++L + PP L
Sbjct: 96 IINLLGACTQDGPLYVIVEYASKGNLREYLQA----REPPGLEYSYNPSHNPEEQLSSKD 151
Query: 433 RLVIAHQIAEGLTYLHSAAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDS 492
+ A+Q+A G+ YL S HRD+ + N+L+ E K++DFGL+R + +
Sbjct: 152 LVSCAYQVARGMEYLASKKC---IHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKK 208
Query: 493 HIFTTAQGTMGYLDPEYYRNFQLTDKSDVYSFGVVLLELLT 533
T + + ++ PE + T +SDV+SFGV+L E+ T
Sbjct: 209 --TTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 247
>pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Piperidine-Carboxamide Inhibitor 2
Length = 327
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 66/239 (27%), Positives = 107/239 (44%), Gaps = 23/239 (9%)
Query: 309 NAKAAGKSARIFTGKEIRRATNNFSKDNLIGTGGFGEVFKGILD------DGTVTAIKRA 362
N AGK++ I KE+ R N + +G G FGEV++G + A+K
Sbjct: 12 NYSFAGKTSSISDLKEVPR--KNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTL 69
Query: 363 KLGNTKGTDL-VLNEVRILCQVNHRSLVRLLGCCVELDQTLMIYEYIPNGTLFDHLHCDF 421
++ +L L E I+ + NH+++VR +G ++ ++ E + G L L
Sbjct: 70 PEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLR--E 127
Query: 422 TGKWPPLPWHLRLV----IAHQIAEGLTYLHSAAVPPIYHRDVKSSNILL---DEKLNAK 474
T P P L ++ +A IA G YL HRD+ + N LL AK
Sbjct: 128 TRPRPSQPSSLAMLDLLHVARDIACGCQYLEENH---FIHRDIAARNCLLTCPGPGRVAK 184
Query: 475 VSDFGLSRLVERTETNDSHIFTTAQGTMGYLDPEYYRNFQLTDKSDVYSFGVVLLELLT 533
+ DFG++R + R A + ++ PE + T K+D +SFGV+L E+ +
Sbjct: 185 IGDFGMARDIYRASYYRKG--GCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 241
>pdb|4ALV|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
pdb|4ALW|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 71/257 (27%), Positives = 116/257 (45%), Gaps = 28/257 (10%)
Query: 316 SARIFTGKEIRRATNNFSKDNLIGTGGFGEVFKGI-LDDGTVTAIKRAK------LGNTK 368
+ ++ GKE + + L+G+GGFG V+ GI + D AIK + G
Sbjct: 37 ATKLAPGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELP 96
Query: 369 GTDLVLNEVRILCQVN--HRSLVRLLGCCVELDQTLMIYEYI-PNGTLFDHLHCDFTGKW 425
V EV +L +V+ ++RLL D ++I E P LF DF +
Sbjct: 97 NGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLF-----DFITER 151
Query: 426 PPLPWHLRLVIAHQIAEGLTYLHSAAVPPIYHRDVKSSNILLD-EKLNAKVSDFGLSRLV 484
L L Q+ E + + H+ V HRD+K NIL+D + K+ DFG L+
Sbjct: 152 GALQEELARSFFWQVLEAVRHCHNCGV---LHRDIKDENILIDLNRGELKLIDFGSGALL 208
Query: 485 ERTETNDSHIFTTAQGTMGYLDPEYYRNFQLTDKS-DVYSFGVVLLELLTSKKAIDFNRE 543
+ T ++T GT Y PE+ R + +S V+S G++L +++ I F +
Sbjct: 209 KDT------VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGD--IPFEHD 260
Query: 544 EENVNLVVYMKKIMDEE 560
EE + V+ ++ + E
Sbjct: 261 EEIIRGQVFFRQRVSSE 277
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 101/203 (49%), Gaps = 15/203 (7%)
Query: 338 IGTGGFGEV----FKGILDD-GTVTAIKRAKLGNTKGTDLVLNEVRILCQVNHRSLVRLL 392
+G G FG V + + D+ G + A+K+ + E++IL ++ +V+
Sbjct: 31 LGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYR 90
Query: 393 GCCVELD-QTL-MIYEYIPNGTLFDHLHCDFTGKWPPLPWHLRLVIAHQIAEGLTYLHSA 450
G Q+L ++ EY+P+G L D L L L+ + QI +G+ YL S
Sbjct: 91 GVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRAR----LDASRLLLYSSQICKGMEYLGSR 146
Query: 451 AVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDSHIFTTAQGTMGYLDPEYY 510
HRD+ + NIL++ + + K++DFGL++L+ + + + Q + + PE
Sbjct: 147 RC---VHRDLAARNILVESEAHVKIADFGLAKLLP-LDKDYYVVREPGQSPIFWYAPESL 202
Query: 511 RNFQLTDKSDVYSFGVVLLELLT 533
+ + +SDV+SFGVVL EL T
Sbjct: 203 SDNIFSRQSDVWSFGVVLYELFT 225
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 103/221 (46%), Gaps = 34/221 (15%)
Query: 338 IGTGGFGEVFK----GILDDG----TVTAIKRAKLGNT-KGTDLVLNEVRILCQV-NHRS 387
+G G FG+V G+ D T A+K K T K +++E+ ++ + H++
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 95
Query: 388 LVRLLGCCVELDQTLMIYEYIPNGTLFDHLHCDFTGKWPP---------------LPWHL 432
++ LLG C + +I EY G L ++L + PP L
Sbjct: 96 IINLLGACTQDGPLYVIVEYASKGNLREYLQ----ARRPPGLEYCYNPSHNPEEQLSSKD 151
Query: 433 RLVIAHQIAEGLTYLHSAAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDS 492
+ A+Q+A G+ YL S HRD+ + N+L+ E K++DFGL+R + +
Sbjct: 152 LVSCAYQVARGMEYLASKKC---IHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKK 208
Query: 493 HIFTTAQGTMGYLDPEYYRNFQLTDKSDVYSFGVVLLELLT 533
T + + ++ PE + T +SDV+SFGV+L E+ T
Sbjct: 209 --TTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 247
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 62/207 (29%), Positives = 96/207 (46%), Gaps = 21/207 (10%)
Query: 330 NNFSKDNLIGTGGFGEVF----KGILDDGTVTAIKRAKLGNTKGTDLVLNEVRILCQVNH 385
+ F + +GTG FG V K + + + + K+ K + LNE RIL VN
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 386 RSLVRLLGCCVELDQTLMIYEYIPNGTLFDHLHCDFTGKWPPLPWHLRLVIAHQIAEGLT 445
LV+L + M+ EY+ G +F HL G++ P H R A QI
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRR--IGRFSE-P-HARFYAA-QIVLTFE 155
Query: 446 YLHSAAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVE-RTETNDSHIFTTAQGTMGY 504
YLHS + +RD+K N+L+D++ +V+DFG ++ V+ RT GT Y
Sbjct: 156 YLHSL---DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT--------WXLCGTPEY 204
Query: 505 LDPEYYRNFQLTDKSDVYSFGVVLLEL 531
L PE + D ++ GV++ E+
Sbjct: 205 LAPEIILSKGYNKAVDWWALGVLIYEM 231
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 102/215 (47%), Gaps = 37/215 (17%)
Query: 337 LIGTGGFGEVFKGI-LDDGTVTAIKRAKLGNTKGTDLVLNEVRILCQVNHRSLVRLLGCC 395
++G G +G V+ G L + AIK +++ + + E+ + + H+++V+ LG
Sbjct: 29 VLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSF 88
Query: 396 VELDQTLMIYEYIPNGTLFDHLHCDFTGKWPPLPWHLRLV--IAHQIAEGLTYLHSAAVP 453
E + E +P G+L L KW PL + + + QI EGL YLH
Sbjct: 89 SENGFIKIFMEQVPGGSLSALLRS----KWGPLKDNEQTIGFYTKQILEGLKYLHDNQ-- 142
Query: 454 PIYHRDVKSSNILLDEKLNA-KVSDFGLSRLVER----TETNDSHIFTTAQGTMGYLDPE 508
I HRD+K N+L++ K+SDFG S+ + TET FT GT+ Y+ PE
Sbjct: 143 -IVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGINPCTET-----FT---GTLQYMAPE 193
Query: 509 YYRNFQLTDK--------SDVYSFGVVLLELLTSK 535
+ DK +D++S G ++E+ T K
Sbjct: 194 ------IIDKGPRGYGKAADIWSLGCTIIEMATGK 222
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 62/207 (29%), Positives = 96/207 (46%), Gaps = 21/207 (10%)
Query: 330 NNFSKDNLIGTGGFGEVF----KGILDDGTVTAIKRAKLGNTKGTDLVLNEVRILCQVNH 385
+ F + +GTG FG V K + + + + K+ K + LNE RIL VN
Sbjct: 42 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 101
Query: 386 RSLVRLLGCCVELDQTLMIYEYIPNGTLFDHLHCDFTGKWPPLPWHLRLVIAHQIAEGLT 445
LV+L + M+ EY+ G +F HL G++ P H R A QI
Sbjct: 102 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRR--IGRFSE-P-HARFYAA-QIVLTFE 156
Query: 446 YLHSAAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVE-RTETNDSHIFTTAQGTMGY 504
YLHS + +RD+K N+L+D++ +V+DFG ++ V+ RT GT Y
Sbjct: 157 YLHSL---DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT--------WXLCGTPEY 205
Query: 505 LDPEYYRNFQLTDKSDVYSFGVVLLEL 531
L PE + D ++ GV++ E+
Sbjct: 206 LAPEIILSKGYNKAVDWWALGVLIYEM 232
>pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Nvp- Tae684
pdb|2XBA|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Pha-E429
Length = 315
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 77/314 (24%), Positives = 130/314 (41%), Gaps = 41/314 (13%)
Query: 313 AGKSARIFTGKEIRRATNNFSKDNLIGTGGFGEVFKGILD------DGTVTAIKRAKLGN 366
AGK++ I KE+ R N + +G G FGEV++G + A+K
Sbjct: 7 AGKTSSISDLKEVPR--KNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVC 64
Query: 367 TKGTDL-VLNEVRILCQVNHRSLVRLLGCCVELDQTLMIYEYIPNGTLFDHLHCDFTGKW 425
++ +L L E I+ + NH+++VR +G ++ ++ E + G L L T
Sbjct: 65 SEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLR--ETRPR 122
Query: 426 PPLPWHLRLV----IAHQIAEGLTYLHSAAVPPIYHRDVKSSNILL---DEKLNAKVSDF 478
P P L ++ +A IA G YL HRD+ + N LL AK+ DF
Sbjct: 123 PSQPSSLAMLDLLHVARDIACGCQYLEENH---FIHRDIAARNCLLTCPGPGRVAKIGDF 179
Query: 479 GLSRLVERTETNDSHIFTTAQGTMGYLDPEYYRNFQLTDKSDVYSFGVVLLELLTSKKAI 538
G++R + R A + ++ PE + T K+D +SFGV+L E+ +
Sbjct: 180 GMARDIYRASYYRKG--GCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMP 237
Query: 539 DFNREEENVNLVVYMKKIMDEERLMEVVDPVLKERATHLDLETMKALGLLAASCLDERRQ 598
++ + V V MD + PV + + C + +
Sbjct: 238 YPSKSNQEVLEFVTSGGRMDPPK--NCPGPVYR----------------IMTQCWQHQPE 279
Query: 599 NRPSMKEVADEIEY 612
+RP+ + + IEY
Sbjct: 280 DRPNFAIILERIEY 293
>pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4DCE|B Chain B, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4FOD|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 36
Length = 333
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 66/239 (27%), Positives = 107/239 (44%), Gaps = 23/239 (9%)
Query: 309 NAKAAGKSARIFTGKEIRRATNNFSKDNLIGTGGFGEVFKGILD------DGTVTAIKRA 362
N AGK++ I KE+ R N + +G G FGEV++G + A+K
Sbjct: 18 NYSFAGKTSSISDLKEVPR--KNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTL 75
Query: 363 KLGNTKGTDL-VLNEVRILCQVNHRSLVRLLGCCVELDQTLMIYEYIPNGTLFDHLHCDF 421
++ +L L E I+ + NH+++VR +G ++ ++ E + G L L
Sbjct: 76 PEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLR--E 133
Query: 422 TGKWPPLPWHLRLV----IAHQIAEGLTYLHSAAVPPIYHRDVKSSNILL---DEKLNAK 474
T P P L ++ +A IA G YL HRD+ + N LL AK
Sbjct: 134 TRPRPSQPSSLAMLDLLHVARDIACGCQYLEENH---FIHRDIAARNCLLTCPGPGRVAK 190
Query: 475 VSDFGLSRLVERTETNDSHIFTTAQGTMGYLDPEYYRNFQLTDKSDVYSFGVVLLELLT 533
+ DFG++R + R A + ++ PE + T K+D +SFGV+L E+ +
Sbjct: 191 IGDFGMARDIYRASYYRKG--GCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 247
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 64/235 (27%), Positives = 109/235 (46%), Gaps = 45/235 (19%)
Query: 332 FSKDNL-----IGTGGFGEVFK----GILDD----GTVTAIKRAKLGNTKG--TDLVLNE 376
F +D L +G G FG+V GI D A+K K T+ +DLV +E
Sbjct: 32 FPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLV-SE 90
Query: 377 VRILCQV-NHRSLVRLLGCCVELDQTLMIYEYIPNGTLFDHLHCDFTGKWPP-------- 427
+ ++ + H++++ LLG C + +I EY G L ++L + PP
Sbjct: 91 MEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRA----RRPPGMEYSYDI 146
Query: 428 -------LPWHLRLVIAHQIAEGLTYLHSAAVPPIYHRDVKSSNILLDEKLNAKVSDFGL 480
+ + + +Q+A G+ YL S HRD+ + N+L+ E +++DFGL
Sbjct: 147 NRVPEEQMTFKDLVSCTYQLARGMEYLASQKC---IHRDLAARNVLVTENNVMRIADFGL 203
Query: 481 SRLVERTETNDSHIFTTAQGTM--GYLDPEYYRNFQLTDKSDVYSFGVVLLELLT 533
+R + N + T G + ++ PE + T +SDV+SFGV++ E+ T
Sbjct: 204 ARDI----NNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 65/235 (27%), Positives = 109/235 (46%), Gaps = 45/235 (19%)
Query: 332 FSKDNL-----IGTGGFGEVFK----GILDD----GTVTAIKRAKLGNTKG--TDLVLNE 376
F +D L +G G FG+V GI D A+K K T+ +DLV +E
Sbjct: 78 FPRDKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLV-SE 136
Query: 377 VRILCQV-NHRSLVRLLGCCVELDQTLMIYEYIPNGTLFDHLHCDFTGKWPP-------- 427
+ ++ + H++++ LLG C + +I EY G L ++L + PP
Sbjct: 137 MEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLR----ARRPPGMEYSYDI 192
Query: 428 -------LPWHLRLVIAHQIAEGLTYLHSAAVPPIYHRDVKSSNILLDEKLNAKVSDFGL 480
+ + + +Q+A G+ YL S HRD+ + N+L+ E K++DFGL
Sbjct: 193 NRVPEEQMTFKDLVSCTYQLARGMEYLASQKC---IHRDLAARNVLVTENNVMKIADFGL 249
Query: 481 SRLVERTETNDSHIFTTAQGTM--GYLDPEYYRNFQLTDKSDVYSFGVVLLELLT 533
+R + N + T G + ++ PE + T +SDV+SFGV++ E+ T
Sbjct: 250 ARDI----NNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 300
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 62/207 (29%), Positives = 96/207 (46%), Gaps = 21/207 (10%)
Query: 330 NNFSKDNLIGTGGFGEVF----KGILDDGTVTAIKRAKLGNTKGTDLVLNEVRILCQVNH 385
+ F + +GTG FG V K + + + + K+ K + LNE RIL VN
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 386 RSLVRLLGCCVELDQTLMIYEYIPNGTLFDHLHCDFTGKWPPLPWHLRLVIAHQIAEGLT 445
LV+L + M+ EY+ G +F HL G++ P H R A QI
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRR--IGRFSE-P-HARFYAA-QIVLTFE 155
Query: 446 YLHSAAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVE-RTETNDSHIFTTAQGTMGY 504
YLHS + +RD+K N+L+D++ +V+DFG ++ V+ RT GT Y
Sbjct: 156 YLHSL---DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT--------WXLCGTPEY 204
Query: 505 LDPEYYRNFQLTDKSDVYSFGVVLLEL 531
L PE + D ++ GV++ E+
Sbjct: 205 LAPEIILSKGYNKAVDWWALGVLIYEM 231
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 62/207 (29%), Positives = 96/207 (46%), Gaps = 21/207 (10%)
Query: 330 NNFSKDNLIGTGGFGEVF----KGILDDGTVTAIKRAKLGNTKGTDLVLNEVRILCQVNH 385
+ F + +GTG FG V K + + + + K+ K + LNE RIL VN
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 386 RSLVRLLGCCVELDQTLMIYEYIPNGTLFDHLHCDFTGKWPPLPWHLRLVIAHQIAEGLT 445
LV+L + M+ EY+ G +F HL G++ P H R A QI
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRR--IGRFAE-P-HARFYAA-QIVLTFE 155
Query: 446 YLHSAAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVE-RTETNDSHIFTTAQGTMGY 504
YLHS + +RD+K N+L+D++ +V+DFG ++ V+ RT GT Y
Sbjct: 156 YLHSL---DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT--------WXLCGTPEY 204
Query: 505 LDPEYYRNFQLTDKSDVYSFGVVLLEL 531
L PE + D ++ GV++ E+
Sbjct: 205 LAPEIILSKGYNKAVDWWALGVLIYEM 231
>pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 1
pdb|4FOC|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 2
Length = 353
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 66/239 (27%), Positives = 107/239 (44%), Gaps = 23/239 (9%)
Query: 309 NAKAAGKSARIFTGKEIRRATNNFSKDNLIGTGGFGEVFKGILD------DGTVTAIKRA 362
N AGK++ I KE+ R N + +G G FGEV++G + A+K
Sbjct: 38 NYSFAGKTSSISDLKEVPR--KNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTL 95
Query: 363 KLGNTKGTDL-VLNEVRILCQVNHRSLVRLLGCCVELDQTLMIYEYIPNGTLFDHLHCDF 421
++ +L L E I+ + NH+++VR +G ++ ++ E + G L L
Sbjct: 96 PEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLR--E 153
Query: 422 TGKWPPLPWHLRLV----IAHQIAEGLTYLHSAAVPPIYHRDVKSSNILL---DEKLNAK 474
T P P L ++ +A IA G YL HRD+ + N LL AK
Sbjct: 154 TRPRPSQPSSLAMLDLLHVARDIACGCQYLEENH---FIHRDIAARNCLLTCPGPGRVAK 210
Query: 475 VSDFGLSRLVERTETNDSHIFTTAQGTMGYLDPEYYRNFQLTDKSDVYSFGVVLLELLT 533
+ DFG++R + R A + ++ PE + T K+D +SFGV+L E+ +
Sbjct: 211 IGDFGMARDIYRASYYRKG--GCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 267
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 65/235 (27%), Positives = 109/235 (46%), Gaps = 45/235 (19%)
Query: 332 FSKDNL-----IGTGGFGEVFK----GILDD----GTVTAIKRAKLGNTKG--TDLVLNE 376
F +D L +G G FG+V GI D A+K K T+ +DLV +E
Sbjct: 24 FPRDKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLV-SE 82
Query: 377 VRILCQV-NHRSLVRLLGCCVELDQTLMIYEYIPNGTLFDHLHCDFTGKWPP-------- 427
+ ++ + H++++ LLG C + +I EY G L ++L + PP
Sbjct: 83 MEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLR----ARRPPGMEYSYDI 138
Query: 428 -------LPWHLRLVIAHQIAEGLTYLHSAAVPPIYHRDVKSSNILLDEKLNAKVSDFGL 480
+ + + +Q+A G+ YL S HRD+ + N+L+ E K++DFGL
Sbjct: 139 NRVPEEQMTFKDLVSCTYQLARGMEYLASQKC---IHRDLAARNVLVTENNVMKIADFGL 195
Query: 481 SRLVERTETNDSHIFTTAQGTM--GYLDPEYYRNFQLTDKSDVYSFGVVLLELLT 533
+R + N + T G + ++ PE + T +SDV+SFGV++ E+ T
Sbjct: 196 ARDI----NNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 246
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 62/207 (29%), Positives = 96/207 (46%), Gaps = 21/207 (10%)
Query: 330 NNFSKDNLIGTGGFGEVF----KGILDDGTVTAIKRAKLGNTKGTDLVLNEVRILCQVNH 385
+ F + +GTG FG V K + + + + K+ K + LNE RIL VN
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 386 RSLVRLLGCCVELDQTLMIYEYIPNGTLFDHLHCDFTGKWPPLPWHLRLVIAHQIAEGLT 445
LV+L + M+ EY+ G +F HL G++ P H R A QI
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRR--IGRFSE-P-HARFYAA-QIVLTFE 155
Query: 446 YLHSAAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVE-RTETNDSHIFTTAQGTMGY 504
YLHS + +RD+K N+L+D++ +V+DFG ++ V+ RT GT Y
Sbjct: 156 YLHSL---DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT--------WXLCGTPEY 204
Query: 505 LDPEYYRNFQLTDKSDVYSFGVVLLEL 531
L PE + D ++ GV++ E+
Sbjct: 205 LAPEIILSKGYNKAVDWWALGVLIYEM 231
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 62/207 (29%), Positives = 96/207 (46%), Gaps = 21/207 (10%)
Query: 330 NNFSKDNLIGTGGFGEVF----KGILDDGTVTAIKRAKLGNTKGTDLVLNEVRILCQVNH 385
+ F + +GTG FG V K + + + + K+ K + LNE RIL VN
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 386 RSLVRLLGCCVELDQTLMIYEYIPNGTLFDHLHCDFTGKWPPLPWHLRLVIAHQIAEGLT 445
LV+L + M+ EY+ G +F HL G++ P H R A QI
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRR--IGRFSE-P-HARFYAA-QIVLTFE 155
Query: 446 YLHSAAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVE-RTETNDSHIFTTAQGTMGY 504
YLHS + +RD+K N+L+D++ +V+DFG ++ V+ RT GT Y
Sbjct: 156 YLHSL---DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT--------WXLCGTPEY 204
Query: 505 LDPEYYRNFQLTDKSDVYSFGVVLLEL 531
L PE + D ++ GV++ E+
Sbjct: 205 LAPEIILSKGYNKAVDWWALGVLIYEM 231
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 62/207 (29%), Positives = 96/207 (46%), Gaps = 21/207 (10%)
Query: 330 NNFSKDNLIGTGGFGEVF----KGILDDGTVTAIKRAKLGNTKGTDLVLNEVRILCQVNH 385
+ F + +GTG FG V K + + + + K+ K + LNE RIL VN
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 386 RSLVRLLGCCVELDQTLMIYEYIPNGTLFDHLHCDFTGKWPPLPWHLRLVIAHQIAEGLT 445
LV+L + M+ EY+ G +F HL G++ P H R A QI
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRR--IGRFSE-P-HARFYAA-QIVLTFE 155
Query: 446 YLHSAAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVE-RTETNDSHIFTTAQGTMGY 504
YLHS + +RD+K N+L+D++ +V+DFG ++ V+ RT GT Y
Sbjct: 156 YLHSL---DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT--------WXLCGTPEY 204
Query: 505 LDPEYYRNFQLTDKSDVYSFGVVLLEL 531
L PE + D ++ GV++ E+
Sbjct: 205 LAPEIILSKGYNKAVDWWALGVLIYEM 231
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 57/201 (28%), Positives = 92/201 (45%), Gaps = 12/201 (5%)
Query: 338 IGTGGFGEVFK-GILDDGTVTAIKRAKLGNTKGTD--LVLNEVRILCQVNHRSLVRLLGC 394
IGTG +G K DG + K G+ + ++++EV +L ++ H ++VR
Sbjct: 14 IGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDR 73
Query: 395 CVELDQTLM--IYEYIPNGTLFDHLHCDFTGKWPPLPWHLRLVIAHQIAEGLTYLH--SA 450
++ T + + EY G L + T + L L + Q+ L H S
Sbjct: 74 IIDRTNTTLYIVMEYCEGGDLASVI-TKGTKERQYLDEEFVLRVMTQLTLALKECHRRSD 132
Query: 451 AVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDSHIFTTAQGTMGYLDPEYY 510
+ HRD+K +N+ LD K N K+ DFGL+R++ +D GT Y+ PE
Sbjct: 133 GGHTVLHRDLKPANVFLDGKQNVKLGDFGLARIL----NHDEDFAKEFVGTPYYMSPEQM 188
Query: 511 RNFQLTDKSDVYSFGVVLLEL 531
+KSD++S G +L EL
Sbjct: 189 NRMSYNEKSDIWSLGCLLYEL 209
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 65/235 (27%), Positives = 109/235 (46%), Gaps = 45/235 (19%)
Query: 332 FSKDNL-----IGTGGFGEVFK----GILDD----GTVTAIKRAKLGNTKG--TDLVLNE 376
F +D L +G G FG+V GI D A+K K T+ +DLV +E
Sbjct: 21 FPRDKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLV-SE 79
Query: 377 VRILCQV-NHRSLVRLLGCCVELDQTLMIYEYIPNGTLFDHLHCDFTGKWPP-------- 427
+ ++ + H++++ LLG C + +I EY G L ++L + PP
Sbjct: 80 MEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLR----ARRPPGMEYSYDI 135
Query: 428 -------LPWHLRLVIAHQIAEGLTYLHSAAVPPIYHRDVKSSNILLDEKLNAKVSDFGL 480
+ + + +Q+A G+ YL S HRD+ + N+L+ E K++DFGL
Sbjct: 136 NRVPEEQMTFKDLVSCTYQLARGMEYLASQKC---IHRDLAARNVLVTENNVMKIADFGL 192
Query: 481 SRLVERTETNDSHIFTTAQGTM--GYLDPEYYRNFQLTDKSDVYSFGVVLLELLT 533
+R + N + T G + ++ PE + T +SDV+SFGV++ E+ T
Sbjct: 193 ARDI----NNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 243
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 62/207 (29%), Positives = 96/207 (46%), Gaps = 21/207 (10%)
Query: 330 NNFSKDNLIGTGGFGEVF----KGILDDGTVTAIKRAKLGNTKGTDLVLNEVRILCQVNH 385
+ F + +GTG FG V K + + + + K+ K + LNE RIL VN
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 386 RSLVRLLGCCVELDQTLMIYEYIPNGTLFDHLHCDFTGKWPPLPWHLRLVIAHQIAEGLT 445
LV+L + M+ EY+ G +F HL G++ P H R A QI
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRR--IGRFXE-P-HARFYAA-QIVLTFE 155
Query: 446 YLHSAAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVE-RTETNDSHIFTTAQGTMGY 504
YLHS + +RD+K N+L+D++ +V+DFG ++ V+ RT GT Y
Sbjct: 156 YLHSL---DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT--------WXLCGTPEY 204
Query: 505 LDPEYYRNFQLTDKSDVYSFGVVLLEL 531
L PE + D ++ GV++ E+
Sbjct: 205 LAPEIILSKGYNKAVDWWALGVLIYEM 231
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 68.9 bits (167), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 59/244 (24%), Positives = 106/244 (43%), Gaps = 24/244 (9%)
Query: 301 IKQREEMLNAKAAGKSARIFTGKEIRRATNNFSKDNLIGTGGFGEVFKGILDDG----TV 356
I++ +E +N + +GK++ +F +IG G + +V L +
Sbjct: 30 IEEEKEAMNTRESGKASSSL-------GLQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAM 82
Query: 357 TAIKRAKLGNTKGTDLVLNEVRILCQV-NHRSLVRLLGCCVELDQTLMIYEYIPNGTLFD 415
+K+ + + + D V E + Q NH LV L C + + EY+ G L
Sbjct: 83 RVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIEYVNGGDLMF 142
Query: 416 HLHCDFTGKWPPLPWHLRLVIAHQIAEGLTYLHSAAVPPIYHRDVKSSNILLDEKLNAKV 475
H+ + LP + +I+ L YLH I +RD+K N+LLD + + K+
Sbjct: 143 HMQ-----RQRKLPEEHARFYSAEISLALNYLHERG---IIYRDLKLDNVLLDSEGHIKL 194
Query: 476 SDFGLSRLVERTETNDSHIFTTAQGTMGYLDPEYYRNFQLTDKSDVYSFGVVLLELLTSK 535
+D+G+ + E D+ +T GT Y+ PE R D ++ GV++ E++ +
Sbjct: 195 TDYGMCK--EGLRPGDTT--STFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGR 250
Query: 536 KAID 539
D
Sbjct: 251 SPFD 254
>pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In
Complex With Crizotinib
Length = 327
Score = 68.9 bits (167), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 65/235 (27%), Positives = 106/235 (45%), Gaps = 23/235 (9%)
Query: 313 AGKSARIFTGKEIRRATNNFSKDNLIGTGGFGEVFKGILD------DGTVTAIKRAKLGN 366
AGK++ I KE+ R N + +G G FGEV++G + A+K
Sbjct: 15 AGKTSSISDLKEVPR--KNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVC 72
Query: 367 TKGTDL-VLNEVRILCQVNHRSLVRLLGCCVELDQTLMIYEYIPNGTLFDHLHCDFTGKW 425
++ +L L E I+ + NH+++VR +G ++ ++ E + G L L T
Sbjct: 73 SEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILMELMAGGDLKSFLR--ETRPR 130
Query: 426 PPLPWHLRLV----IAHQIAEGLTYLHSAAVPPIYHRDVKSSNILL---DEKLNAKVSDF 478
P P L ++ +A IA G YL HRD+ + N LL AK+ DF
Sbjct: 131 PSQPSSLAMLDLLHVARDIACGCQYLEENH---FIHRDIAARNCLLTCPGPGRVAKIGDF 187
Query: 479 GLSRLVERTETNDSHIFTTAQGTMGYLDPEYYRNFQLTDKSDVYSFGVVLLELLT 533
G++R + R A + ++ PE + T K+D +SFGV+L E+ +
Sbjct: 188 GMARDIYRASYYRKG--GCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 240
>pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In
Complex With Crizotinib (Pf-02341066)
Length = 327
Score = 68.9 bits (167), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 65/235 (27%), Positives = 106/235 (45%), Gaps = 23/235 (9%)
Query: 313 AGKSARIFTGKEIRRATNNFSKDNLIGTGGFGEVFKGILD------DGTVTAIKRAKLGN 366
AGK++ I KE+ R N + +G G FGEV++G + A+K
Sbjct: 15 AGKTSSISDLKEVPR--KNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVC 72
Query: 367 TKGTDL-VLNEVRILCQVNHRSLVRLLGCCVELDQTLMIYEYIPNGTLFDHLHCDFTGKW 425
++ +L L E I+ + NH+++VR +G ++ ++ E + G L L T
Sbjct: 73 SEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLR--ETRPR 130
Query: 426 PPLPWHLRLV----IAHQIAEGLTYLHSAAVPPIYHRDVKSSNILL---DEKLNAKVSDF 478
P P L ++ +A IA G YL HRD+ + N LL AK+ DF
Sbjct: 131 PSQPSSLAMLDLLHVARDIACGCQYLEENH---FIHRDIAARNCLLTCPGPGRVAKIGDF 187
Query: 479 GLSRLVERTETNDSHIFTTAQGTMGYLDPEYYRNFQLTDKSDVYSFGVVLLELLT 533
G++R + R A + ++ PE + T K+D +SFGV+L E+ +
Sbjct: 188 GMARDIYRASYYRKG--GCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 240
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 68.9 bits (167), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 103/221 (46%), Gaps = 34/221 (15%)
Query: 338 IGTGGFGEVFK----GILDDG----TVTAIKRAKLGNT-KGTDLVLNEVRILCQV-NHRS 387
+G G FG+V G+ D T A+K K T K +++E+ ++ + H++
Sbjct: 77 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 136
Query: 388 LVRLLGCCVELDQTLMIYEYIPNGTLFDHLHCDFTGKWPP---------------LPWHL 432
++ LLG C + +I EY G L ++L + PP L
Sbjct: 137 IINLLGACTQDGPLYVIVEYASKGNLREYLQA----RRPPGLEYSYNPSHNPEEQLSSKD 192
Query: 433 RLVIAHQIAEGLTYLHSAAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDS 492
+ A+Q+A G+ YL S HRD+ + N+L+ E K++DFGL+R + +
Sbjct: 193 LVSCAYQVARGMEYLASKKC---IHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKK 249
Query: 493 HIFTTAQGTMGYLDPEYYRNFQLTDKSDVYSFGVVLLELLT 533
T + + ++ PE + T +SDV+SFGV+L E+ T
Sbjct: 250 T--TNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 288
>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 68.9 bits (167), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 77/314 (24%), Positives = 131/314 (41%), Gaps = 41/314 (13%)
Query: 313 AGKSARIFTGKEIRRATNNFSKDNLIGTGGFGEVFKGILD------DGTVTAIKRAKLGN 366
AGK++ I KE+ R N + +G G FGEV++G + A+K
Sbjct: 30 AGKTSSISDLKEVPR--KNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVC 87
Query: 367 TKGTDL-VLNEVRILCQVNHRSLVRLLGCCVELDQTLMIYEYIPNGTLFDHLHCDFTGKW 425
++ +L L E I+ ++NH+++VR +G ++ ++ E + G L L T
Sbjct: 88 SEQDELDFLMEALIISKLNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLR--ETRPR 145
Query: 426 PPLPWHLRLV----IAHQIAEGLTYLHSAAVPPIYHRDVKSSNILL---DEKLNAKVSDF 478
P P L ++ +A IA G YL HRD+ + N LL AK+ DF
Sbjct: 146 PSQPSSLAMLDLLHVARDIACGCQYLEENH---FIHRDIAARNCLLTCPGPGRVAKIGDF 202
Query: 479 GLSRLVERTETNDSHIFTTAQGTMGYLDPEYYRNFQLTDKSDVYSFGVVLLELLTSKKAI 538
G++R + R A + ++ PE + T K+D +SFGV+L E+ +
Sbjct: 203 GMARDIYRASYYRKG--GCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMP 260
Query: 539 DFNREEENVNLVVYMKKIMDEERLMEVVDPVLKERATHLDLETMKALGLLAASCLDERRQ 598
++ + V V MD + PV + + C + +
Sbjct: 261 YPSKSNQEVLEFVTSGGRMDPPK--NCPGPVYR----------------IMTQCWQHQPE 302
Query: 599 NRPSMKEVADEIEY 612
+RP+ + + IEY
Sbjct: 303 DRPNFAIILERIEY 316
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 68.9 bits (167), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 93/212 (43%), Gaps = 19/212 (8%)
Query: 326 RRATNNFSKDNLIGTGGFGEV-FKGILDDGTVTAIKRAK---LGNTKGTDLVLNEVRILC 381
+ + +F +GTG FG V +G A+K K + K + +E +L
Sbjct: 2 KYSLQDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLS 61
Query: 382 QVNHRSLVRLLGCCVELDQTLMIYEYIPNGTLFDHLHCDFTGKWPPLPWHLRLVIAHQIA 441
V H ++R+ G + Q MI +YI G LF L K P + A ++
Sbjct: 62 IVTHPFIIRMWGTFQDAQQIFMIMDYIEGGELFSLLR-----KSQRFPNPVAKFYAAEVC 116
Query: 442 EGLTYLHSAAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDSHIFTTAQGT 501
L YLHS I +RD+K NILLD+ + K++DFG ++ V + GT
Sbjct: 117 LALEYLHSKD---IIYRDLKPENILLDKNGHIKITDFGFAKYV-------PDVTYXLCGT 166
Query: 502 MGYLDPEYYRNFQLTDKSDVYSFGVVLLELLT 533
Y+ PE D +SFG+++ E+L
Sbjct: 167 PDYIAPEVVSTKPYNKSIDWWSFGILIYEMLA 198
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 68.6 bits (166), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 61/207 (29%), Positives = 93/207 (44%), Gaps = 21/207 (10%)
Query: 330 NNFSKDNLIGTGGFGEVF----KGILDDGTVTAIKRAKLGNTKGTDLVLNEVRILCQVNH 385
+ F + +GTG FG V K + + + + K+ K + LNE RIL VN
Sbjct: 62 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 121
Query: 386 RSLVRLLGCCVELDQTLMIYEYIPNGTLFDHLHCDFTGKWPPLPWHLRLVIAHQIAEGLT 445
LV+L + M+ EY+ G +F HL P H R A QI
Sbjct: 122 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEP----HARFYAA-QIVLTFE 176
Query: 446 YLHSAAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVE-RTETNDSHIFTTAQGTMGY 504
YLHS + +RD+K N+L+D++ +V+DFG ++ V+ RT GT Y
Sbjct: 177 YLHSL---DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT--------WXLCGTPEY 225
Query: 505 LDPEYYRNFQLTDKSDVYSFGVVLLEL 531
L PE + D ++ GV++ E+
Sbjct: 226 LAPEIILSKGYNKAVDWWALGVLIYEM 252
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 68.6 bits (166), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 62/207 (29%), Positives = 96/207 (46%), Gaps = 21/207 (10%)
Query: 330 NNFSKDNLIGTGGFGEVF----KGILDDGTVTAIKRAKLGNTKGTDLVLNEVRILCQVNH 385
+ F + +GTG FG V K + + + + K+ K + LNE RIL VN
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 386 RSLVRLLGCCVELDQTLMIYEYIPNGTLFDHLHCDFTGKWPPLPWHLRLVIAHQIAEGLT 445
LV+L + M+ EY+ G +F HL G++ P H R A QI
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRR--IGRFXE-P-HARFYAA-QIVLTFE 155
Query: 446 YLHSAAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVE-RTETNDSHIFTTAQGTMGY 504
YLHS + +RD+K N+L+D++ +V+DFG ++ V+ RT GT Y
Sbjct: 156 YLHSL---DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT--------WXLCGTPEY 204
Query: 505 LDPEYYRNFQLTDKSDVYSFGVVLLEL 531
L PE + D ++ GV++ E+
Sbjct: 205 LAPEIILSKGYNKAVDWWALGVLIYEM 231
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 68.6 bits (166), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 62/207 (29%), Positives = 96/207 (46%), Gaps = 21/207 (10%)
Query: 330 NNFSKDNLIGTGGFGEVF----KGILDDGTVTAIKRAKLGNTKGTDLVLNEVRILCQVNH 385
+ F + +GTG FG V K + + + + K+ K + LNE RIL VN
Sbjct: 36 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 95
Query: 386 RSLVRLLGCCVELDQTLMIYEYIPNGTLFDHLHCDFTGKWPPLPWHLRLVIAHQIAEGLT 445
LV+L + M+ EY+ G +F HL G++ P H R A QI
Sbjct: 96 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRR--IGRFXE-P-HARFYAA-QIVLTFE 150
Query: 446 YLHSAAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVE-RTETNDSHIFTTAQGTMGY 504
YLHS + +RD+K N+L+D++ +V+DFG ++ V+ RT GT Y
Sbjct: 151 YLHSL---DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT--------WXLCGTPEY 199
Query: 505 LDPEYYRNFQLTDKSDVYSFGVVLLEL 531
L PE + D ++ GV++ E+
Sbjct: 200 LAPEIILSKGYNKAVDWWALGVLIYEM 226
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 65/208 (31%), Positives = 97/208 (46%), Gaps = 21/208 (10%)
Query: 338 IGTGGFGEV--FKGIL--DDGTVTAIKRAKLGNTKGTDLVLNEVRILCQVNHRSLVRLLG 393
IG G F +V + IL + V I + +L N+ + EVRI +NH ++V+L
Sbjct: 22 IGKGNFAKVKLARHILTGKEVAVKIIDKTQL-NSSSLQKLFREVRIXKVLNHPNIVKLFE 80
Query: 394 CCVELDQTL-MIYEYIPNGTLFDHLHCDFTGKWPPLPWHLRLVIAHQIAEGLTYLHSAAV 452
+E ++TL ++ EY G +FD+L K R QI + Y H
Sbjct: 81 V-IETEKTLYLVXEYASGGEVFDYLVAHGRXKEKEARAKFR-----QIVSAVQYCHQKF- 133
Query: 453 PPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDSHIFTTAQGTMGYLDPEYYRN 512
I HRD+K+ N+LLD N K++DFG S E T N F G Y PE ++
Sbjct: 134 --IVHRDLKAENLLLDADXNIKIADFGFSN--EFTFGNKLDAFC---GAPPYAAPELFQG 186
Query: 513 FQLTD-KSDVYSFGVVLLELLTSKKAID 539
+ + DV+S GV+L L++ D
Sbjct: 187 KKYDGPEVDVWSLGVILYTLVSGSLPFD 214
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 62/207 (29%), Positives = 96/207 (46%), Gaps = 21/207 (10%)
Query: 330 NNFSKDNLIGTGGFGEVF----KGILDDGTVTAIKRAKLGNTKGTDLVLNEVRILCQVNH 385
+ F + +GTG FG V K + + + + K+ K + LNE RIL VN
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 386 RSLVRLLGCCVELDQTLMIYEYIPNGTLFDHLHCDFTGKWPPLPWHLRLVIAHQIAEGLT 445
LV+L + M+ EY+ G +F HL G++ P H R A QI
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRR--IGRFXE-P-HARFYAA-QIVLTFE 155
Query: 446 YLHSAAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVE-RTETNDSHIFTTAQGTMGY 504
YLHS + +RD+K N+L+D++ +V+DFG ++ V+ RT GT Y
Sbjct: 156 YLHSL---DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT--------WXLCGTPEY 204
Query: 505 LDPEYYRNFQLTDKSDVYSFGVVLLEL 531
L PE + D ++ GV++ E+
Sbjct: 205 LAPEIILSKGYNKAVDWWALGVLIYEM 231
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 74/297 (24%), Positives = 126/297 (42%), Gaps = 47/297 (15%)
Query: 326 RRATNNFSKDNLIGTGGFGEV-FKGILDDGTVTAIKRAKLGNTKGTDLVLNEVRILCQVN 384
R +NF K IG G G V + G + A+K+ L + +L+ NEV I+
Sbjct: 150 RSYLDNFIK---IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQ 206
Query: 385 HRSLVRLLGCCVELDQTLMIYEYIPNGTLFDHLHCDFTGKWPPLPWHLRL------VIAH 438
H ++V + + D+ ++ E++ G L D + H R+ +
Sbjct: 207 HENVVEMYNSYLVGDELWVVMEFLEGGALTD------------IVTHTRMNEEQIAAVCL 254
Query: 439 QIAEGLTYLHSAAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDSHIFTTA 498
+ + L+ LH+ V HRD+KS +ILL K+SDFG V + +
Sbjct: 255 AVLQALSVLHAQGV---IHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLV--- 308
Query: 499 QGTMGYLDPEYYRNFQLTDKSDVYSFGVVLLELLTSK---------KAIDFNREE----- 544
GT ++ PE + D++S G++++E++ + KA+ R+
Sbjct: 309 -GTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLPPRL 367
Query: 545 ENVNLVV-YMKKIMDEERLMEVVDPVLKERATHLDLETMKALGLLAASCLDERRQNR 600
+N++ V +K +D RL+ V DP + A L A AS + RQNR
Sbjct: 368 KNLHKVSPSLKGFLD--RLL-VRDPAQRATAAELLKHPFLAKAGPPASIVPLMRQNR 421
>pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma
Kinase In Complex With Ch5424802
Length = 344
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 65/235 (27%), Positives = 106/235 (45%), Gaps = 23/235 (9%)
Query: 313 AGKSARIFTGKEIRRATNNFSKDNLIGTGGFGEVFKGILD------DGTVTAIKRAKLGN 366
AGK++ I KE+ R N + +G G FGEV++G + A+K
Sbjct: 32 AGKTSSISDLKEVPR--KNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVC 89
Query: 367 TKGTDL-VLNEVRILCQVNHRSLVRLLGCCVELDQTLMIYEYIPNGTLFDHLHCDFTGKW 425
++ +L L E I+ + NH+++VR +G ++ ++ E + G L L T
Sbjct: 90 SEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLR--ETRPR 147
Query: 426 PPLPWHLRLV----IAHQIAEGLTYLHSAAVPPIYHRDVKSSNILL---DEKLNAKVSDF 478
P P L ++ +A IA G YL HRD+ + N LL AK+ DF
Sbjct: 148 PSQPSSLAMLDLLHVARDIACGCQYLEENH---FIHRDIAARNCLLTCPGPGRVAKIGDF 204
Query: 479 GLSRLVERTETNDSHIFTTAQGTMGYLDPEYYRNFQLTDKSDVYSFGVVLLELLT 533
G++R + R A + ++ PE + T K+D +SFGV+L E+ +
Sbjct: 205 GMARDIYRASYYRKG--GCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 257
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 65/235 (27%), Positives = 109/235 (46%), Gaps = 45/235 (19%)
Query: 332 FSKDNL-----IGTGGFGEVFK----GILDD----GTVTAIKRAKLGNTKG--TDLVLNE 376
F +D L +G G FG+V GI D A+K K T+ +DLV +E
Sbjct: 19 FPRDKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLV-SE 77
Query: 377 VRILCQV-NHRSLVRLLGCCVELDQTLMIYEYIPNGTLFDHLHCDFTGKWPP-------- 427
+ ++ + H++++ LLG C + +I EY G L ++L + PP
Sbjct: 78 MEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLR----ARRPPGMEYSYDI 133
Query: 428 -------LPWHLRLVIAHQIAEGLTYLHSAAVPPIYHRDVKSSNILLDEKLNAKVSDFGL 480
+ + + +Q+A G+ YL S HRD+ + N+L+ E K++DFGL
Sbjct: 134 NRVPEEQMTFKDLVSCTYQLARGMEYLASQKC---IHRDLTARNVLVTENNVMKIADFGL 190
Query: 481 SRLVERTETNDSHIFTTAQGTM--GYLDPEYYRNFQLTDKSDVYSFGVVLLELLT 533
+R + N + T G + ++ PE + T +SDV+SFGV++ E+ T
Sbjct: 191 ARDI----NNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 241
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 50/204 (24%), Positives = 97/204 (47%), Gaps = 18/204 (8%)
Query: 332 FSKDNLIGTGGFGEVFKGI-LDDGTVTAIKRAKLGNTKGTDLVLNEVRILCQVNHRSLVR 390
+++ IG G G V+ + + G AI++ L +L++NE+ ++ + + ++V
Sbjct: 22 YTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVN 81
Query: 391 LLGCCVELDQTLMIYEYIPNGTLFDHLH--CDFTGKWPPLPWHLRLVIAHQIAEGLTYLH 448
L + D+ ++ EY+ G+L D + C G+ + + + L +LH
Sbjct: 82 YLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQIA--------AVCRECLQALEFLH 133
Query: 449 SAAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDSHIFTTAQGTMGYLDPE 508
S V HRD+KS NILL + K++DFG + ++ S + GT ++ PE
Sbjct: 134 SNQV---IHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSEMV----GTPYWMAPE 186
Query: 509 YYRNFQLTDKSDVYSFGVVLLELL 532
K D++S G++ +E++
Sbjct: 187 VVTRKAYGPKVDIWSLGIMAIEMI 210
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 97/204 (47%), Gaps = 18/204 (8%)
Query: 332 FSKDNLIGTGGFGEVFKGI-LDDGTVTAIKRAKLGNTKGTDLVLNEVRILCQVNHRSLVR 390
+++ IG G G V+ + + G AI++ L +L++NE+ ++ + + ++V
Sbjct: 22 YTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVN 81
Query: 391 LLGCCVELDQTLMIYEYIPNGTLFDHL--HCDFTGKWPPLPWHLRLVIAHQIAEGLTYLH 448
L + D+ ++ EY+ G+L D + C G+ + + + L +LH
Sbjct: 82 YLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQIA--------AVCRECLQALEFLH 133
Query: 449 SAAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDSHIFTTAQGTMGYLDPE 508
S V HRD+KS NILL + K++DFG + ++ S T GT ++ PE
Sbjct: 134 SNQV---IHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRS----TMVGTPYWMAPE 186
Query: 509 YYRNFQLTDKSDVYSFGVVLLELL 532
K D++S G++ +E++
Sbjct: 187 VVTRKAYGPKVDIWSLGIMAIEMI 210
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 100/212 (47%), Gaps = 21/212 (9%)
Query: 329 TNNFSKDNLIGTGGFGEVF----KGILDDGTVTAIKRAKLGNTKGTDLVLNEVRILCQVN 384
++ + ++G G FGEV K + V I + ++ + +L EV++L Q++
Sbjct: 31 SDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLD 90
Query: 385 HRSLVRLLGCCVELDQTLMIYEYIPNGTLFDHLHCDFTGKWPPLPWHLRLVIAHQIAEGL 444
H ++++L + ++ E G LFD + + K R++ Q+ G+
Sbjct: 91 HPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEI---ISRKRFSEVDAARII--RQVLSGI 145
Query: 445 TYLHSAAVPPIYHRDVKSSNILLDEK---LNAKVSDFGLSRLVERTETNDSHIFTTAQGT 501
TY+H I HRD+K N+LL+ K N ++ DFGLS E ++ I GT
Sbjct: 146 TYMHKN---KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKI-----GT 197
Query: 502 MGYLDPEYYRNFQLTDKSDVYSFGVVLLELLT 533
Y+ PE +K DV+S GV+L LL+
Sbjct: 198 AYYIAPEVLHG-TYDEKCDVWSTGVILYILLS 228
>pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 77/314 (24%), Positives = 130/314 (41%), Gaps = 41/314 (13%)
Query: 313 AGKSARIFTGKEIRRATNNFSKDNLIGTGGFGEVFKGILD------DGTVTAIKRAKLGN 366
AGK++ I KE+ R N + +G G FGEV++G + A+K
Sbjct: 30 AGKTSSISDLKEVPR--KNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVC 87
Query: 367 TKGTDL-VLNEVRILCQVNHRSLVRLLGCCVELDQTLMIYEYIPNGTLFDHLHCDFTGKW 425
++ +L L E I+ + NH+++VR +G ++ ++ E + G L L T
Sbjct: 88 SEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILMELMAGGDLKSFLR--ETRPR 145
Query: 426 PPLPWHLRLV----IAHQIAEGLTYLHSAAVPPIYHRDVKSSNILL---DEKLNAKVSDF 478
P P L ++ +A IA G YL HRD+ + N LL AK+ DF
Sbjct: 146 PSQPSSLAMLDLLHVARDIACGCQYLEENH---FIHRDIAARNCLLTCPGPGRVAKIGDF 202
Query: 479 GLSRLVERTETNDSHIFTTAQGTMGYLDPEYYRNFQLTDKSDVYSFGVVLLELLTSKKAI 538
G++R + R A + ++ PE + T K+D +SFGV+L E+ +
Sbjct: 203 GMARDIYRASYYRKG--GCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMP 260
Query: 539 DFNREEENVNLVVYMKKIMDEERLMEVVDPVLKERATHLDLETMKALGLLAASCLDERRQ 598
++ + V V MD + PV + + C + +
Sbjct: 261 YPSKSNQEVLEFVTSGGRMDPPK--NCPGPVYR----------------IMTQCWQHQPE 302
Query: 599 NRPSMKEVADEIEY 612
+RP+ + + IEY
Sbjct: 303 DRPNFAIILERIEY 316
>pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 65/235 (27%), Positives = 106/235 (45%), Gaps = 23/235 (9%)
Query: 313 AGKSARIFTGKEIRRATNNFSKDNLIGTGGFGEVFKGILD------DGTVTAIKRAKLGN 366
AGK++ I KE+ R N + +G G FGEV++G + A+K
Sbjct: 30 AGKTSSISDLKEVPR--KNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVY 87
Query: 367 TKGTDL-VLNEVRILCQVNHRSLVRLLGCCVELDQTLMIYEYIPNGTLFDHLHCDFTGKW 425
++ +L L E I+ + NH+++VR +G ++ ++ E + G L L T
Sbjct: 88 SEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLR--ETRPR 145
Query: 426 PPLPWHLRLV----IAHQIAEGLTYLHSAAVPPIYHRDVKSSNILL---DEKLNAKVSDF 478
P P L ++ +A IA G YL HRD+ + N LL AK+ DF
Sbjct: 146 PSQPSSLAMLDLLHVARDIACGCQYLEENH---FIHRDIAARNCLLTCPGPGRVAKIGDF 202
Query: 479 GLSRLVERTETNDSHIFTTAQGTMGYLDPEYYRNFQLTDKSDVYSFGVVLLELLT 533
G++R + R A + ++ PE + T K+D +SFGV+L E+ +
Sbjct: 203 GMARDIYRASYYRKG--GCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 255
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 102/215 (47%), Gaps = 37/215 (17%)
Query: 337 LIGTGGFGEVFKGI-LDDGTVTAIKRAKLGNTKGTDLVLNEVRILCQVNHRSLVRLLGCC 395
++G G +G V+ G L + AIK +++ + + E+ + + H+++V+ LG
Sbjct: 15 VLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSF 74
Query: 396 VELDQTLMIYEYIPNGTLFDHLHCDFTGKWPPLPWHLRLV--IAHQIAEGLTYLHSAAVP 453
E + E +P G+L L KW PL + + + QI EGL YLH
Sbjct: 75 SENGFIKIFMEQVPGGSLSALLRS----KWGPLKDNEQTIGFYTKQILEGLKYLHDNQ-- 128
Query: 454 PIYHRDVKSSNILLDEKLNA-KVSDFGLSRLVER----TETNDSHIFTTAQGTMGYLDPE 508
I HRD+K N+L++ K+SDFG S+ + TET FT GT+ Y+ PE
Sbjct: 129 -IVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGINPCTET-----FT---GTLQYMAPE 179
Query: 509 YYRNFQLTDK--------SDVYSFGVVLLELLTSK 535
+ DK +D++S G ++E+ T K
Sbjct: 180 ------IIDKGPRGYGKAADIWSLGCTIIEMATGK 208
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 68/215 (31%), Positives = 98/215 (45%), Gaps = 21/215 (9%)
Query: 331 NFSKDNLIGTGGFGEV--FKGILDDGTVTAIKRAKLGNTKGTDL--VLNEVRILCQVNHR 386
N+ IG G F +V + IL G AIK T L + EVRI+ +NH
Sbjct: 16 NYRLLKTIGKGNFAKVKLARHILT-GREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHP 74
Query: 387 SLVRLLGCCVELDQTL-MIYEYIPNGTLFDHLHCDFTGKWPPLPWHLRLVIAHQIAEGLT 445
++V+L +E ++TL +I EY G +FD+L K R QI +
Sbjct: 75 NIVKLFEV-IETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARSKFR-----QIVSAVQ 128
Query: 446 YLHSAAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDSHIFTTAQGTMGYL 505
Y H I HRD+K+ N+LLD +N K++DFG S E T F G Y
Sbjct: 129 YCHQKR---IVHRDLKAENLLLDADMNIKIADFGFSN--EFTVGGKLDAFC---GAPPYA 180
Query: 506 DPEYYRNFQLTD-KSDVYSFGVVLLELLTSKKAID 539
PE ++ + + DV+S GV+L L++ D
Sbjct: 181 APELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFD 215
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 50/204 (24%), Positives = 97/204 (47%), Gaps = 18/204 (8%)
Query: 332 FSKDNLIGTGGFGEVFKGI-LDDGTVTAIKRAKLGNTKGTDLVLNEVRILCQVNHRSLVR 390
+++ IG G G V+ + + G AI++ L +L++NE+ ++ + + ++V
Sbjct: 23 YTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVN 82
Query: 391 LLGCCVELDQTLMIYEYIPNGTLFDHLH--CDFTGKWPPLPWHLRLVIAHQIAEGLTYLH 448
L + D+ ++ EY+ G+L D + C G+ + + + L +LH
Sbjct: 83 YLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQIA--------AVCRECLQALEFLH 134
Query: 449 SAAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDSHIFTTAQGTMGYLDPE 508
S V HRD+KS NILL + K++DFG + ++ S + GT ++ PE
Sbjct: 135 SNQV---IHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSXMV----GTPYWMAPE 187
Query: 509 YYRNFQLTDKSDVYSFGVVLLELL 532
K D++S G++ +E++
Sbjct: 188 VVTRKAYGPKVDIWSLGIMAIEMI 211
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 50/204 (24%), Positives = 97/204 (47%), Gaps = 18/204 (8%)
Query: 332 FSKDNLIGTGGFGEVFKGI-LDDGTVTAIKRAKLGNTKGTDLVLNEVRILCQVNHRSLVR 390
+++ IG G G V+ + + G AI++ L +L++NE+ ++ + + ++V
Sbjct: 22 YTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVN 81
Query: 391 LLGCCVELDQTLMIYEYIPNGTLFDHLH--CDFTGKWPPLPWHLRLVIAHQIAEGLTYLH 448
L + D+ ++ EY+ G+L D + C G+ + + + L +LH
Sbjct: 82 YLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQIA--------AVCRECLQALEFLH 133
Query: 449 SAAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDSHIFTTAQGTMGYLDPE 508
S V HRD+KS NILL + K++DFG + ++ S + GT ++ PE
Sbjct: 134 SNQV---IHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSXMV----GTPYWMAPE 186
Query: 509 YYRNFQLTDKSDVYSFGVVLLELL 532
K D++S G++ +E++
Sbjct: 187 VVTRKAYGPKVDIWSLGIMAIEMI 210
>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
pdb|3EKN|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
Length = 307
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 102/211 (48%), Gaps = 23/211 (10%)
Query: 338 IGTGGFGEVFKGILDD------GTVTAIKRA-KLGNTKGTDLVLNEVRILCQVNHRSLVR 390
+G G FG V++G D T A+K + + + LNE ++ +VR
Sbjct: 26 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 85
Query: 391 LLGCCVELDQTLMIYEYIPNGTLFDHLHC------DFTGKWPPLPWHLRLVIAHQIAEGL 444
LLG + TL++ E + +G L +L + G+ PP + + +A +IA+G+
Sbjct: 86 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEM-IQMAAEIADGM 144
Query: 445 TYLHSAAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDSHIFTTAQGTM-- 502
YL++ HR++ + N ++ K+ DFG++R + T+ + +G +
Sbjct: 145 AYLNAKK---FVHRNLAARNCMVAHDFTVKIGDFGMTRDIYETD----YYRKGGKGLLPV 197
Query: 503 GYLDPEYYRNFQLTDKSDVYSFGVVLLELLT 533
++ PE ++ T SD++SFGVVL E+ +
Sbjct: 198 RWMAPESLKDGVFTTSSDMWSFGVVLWEITS 228
>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The
Insulin Receptor Tyrosine Kinase
Length = 306
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 102/211 (48%), Gaps = 23/211 (10%)
Query: 338 IGTGGFGEVFKGILDD------GTVTAIKRA-KLGNTKGTDLVLNEVRILCQVNHRSLVR 390
+G G FG V++G D T A+K + + + LNE ++ +VR
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 84
Query: 391 LLGCCVELDQTLMIYEYIPNGTLFDHLHC------DFTGKWPPLPWHLRLVIAHQIAEGL 444
LLG + TL++ E + +G L +L + G+ PP + + +A +IA+G+
Sbjct: 85 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEM-IQMAAEIADGM 143
Query: 445 TYLHSAAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDSHIFTTAQGTM-- 502
YL++ HR++ + N ++ K+ DFG++R + T+ + +G +
Sbjct: 144 AYLNAKK---FVHRNLAARNCMVAHDFTVKIGDFGMTRDIYETD----YYRKGGKGLLPV 196
Query: 503 GYLDPEYYRNFQLTDKSDVYSFGVVLLELLT 533
++ PE ++ T SD++SFGVVL E+ +
Sbjct: 197 RWMAPESLKDGVFTTSSDMWSFGVVLWEITS 227
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/207 (29%), Positives = 96/207 (46%), Gaps = 21/207 (10%)
Query: 330 NNFSKDNLIGTGGFGEVF----KGILDDGTVTAIKRAKLGNTKGTDLVLNEVRILCQVNH 385
+ F + +GTG FG V K + + + + K+ K + LNE RIL VN
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 386 RSLVRLLGCCVELDQTLMIYEYIPNGTLFDHLHCDFTGKWPPLPWHLRLVIAHQIAEGLT 445
LV+L + M+ EY+ G +F HL G++ P H R A QI
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRR--IGRFSE-P-HARFYAA-QIVLTFE 155
Query: 446 YLHSAAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVE-RTETNDSHIFTTAQGTMGY 504
YLHS + +RD+K N+++D++ +V+DFG ++ V+ RT GT Y
Sbjct: 156 YLHSL---DLIYRDLKPENLIIDQQGYIQVTDFGFAKRVKGRT--------WXLCGTPEY 204
Query: 505 LDPEYYRNFQLTDKSDVYSFGVVLLEL 531
L PE + D ++ GV++ E+
Sbjct: 205 LAPEIIISKGYNKAVDWWALGVLIYEM 231
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 100/212 (47%), Gaps = 21/212 (9%)
Query: 329 TNNFSKDNLIGTGGFGEVF----KGILDDGTVTAIKRAKLGNTKGTDLVLNEVRILCQVN 384
++ + ++G G FGEV K + V I + ++ + +L EV++L Q++
Sbjct: 48 SDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLD 107
Query: 385 HRSLVRLLGCCVELDQTLMIYEYIPNGTLFDHLHCDFTGKWPPLPWHLRLVIAHQIAEGL 444
H ++++L + ++ E G LFD + + K R++ Q+ G+
Sbjct: 108 HPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEI---ISRKRFSEVDAARII--RQVLSGI 162
Query: 445 TYLHSAAVPPIYHRDVKSSNILLDEK---LNAKVSDFGLSRLVERTETNDSHIFTTAQGT 501
TY+H I HRD+K N+LL+ K N ++ DFGLS E ++ I GT
Sbjct: 163 TYMHK---NKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKI-----GT 214
Query: 502 MGYLDPEYYRNFQLTDKSDVYSFGVVLLELLT 533
Y+ PE +K DV+S GV+L LL+
Sbjct: 215 AYYIAPEVLHG-TYDEKCDVWSTGVILYILLS 245
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/207 (29%), Positives = 96/207 (46%), Gaps = 21/207 (10%)
Query: 330 NNFSKDNLIGTGGFGEVF----KGILDDGTVTAIKRAKLGNTKGTDLVLNEVRILCQVNH 385
+ F + +GTG FG V K + + + + K+ K + LNE RIL VN
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 386 RSLVRLLGCCVELDQTLMIYEYIPNGTLFDHLHCDFTGKWPPLPWHLRLVIAHQIAEGLT 445
LV+L + M+ EY+ G +F HL G++ P H R A QI
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRR--IGRFSE-P-HARFYAA-QIVLTFE 155
Query: 446 YLHSAAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVE-RTETNDSHIFTTAQGTMGY 504
YLHS + +RD+K N+L+D++ +V+DFG ++ V+ RT GT Y
Sbjct: 156 YLHSL---DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT--------WXLCGTPEY 204
Query: 505 LDPEYYRNFQLTDKSDVYSFGVVLLEL 531
L PE + D ++ GV++ ++
Sbjct: 205 LAPEIILSKGYNKAVDWWALGVLIYQM 231
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 100/212 (47%), Gaps = 21/212 (9%)
Query: 329 TNNFSKDNLIGTGGFGEVF----KGILDDGTVTAIKRAKLGNTKGTDLVLNEVRILCQVN 384
++ + ++G G FGEV K + V I + ++ + +L EV++L Q++
Sbjct: 49 SDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLD 108
Query: 385 HRSLVRLLGCCVELDQTLMIYEYIPNGTLFDHLHCDFTGKWPPLPWHLRLVIAHQIAEGL 444
H ++++L + ++ E G LFD + + K R++ Q+ G+
Sbjct: 109 HPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEI---ISRKRFSEVDAARII--RQVLSGI 163
Query: 445 TYLHSAAVPPIYHRDVKSSNILLDEK---LNAKVSDFGLSRLVERTETNDSHIFTTAQGT 501
TY+H I HRD+K N+LL+ K N ++ DFGLS E ++ I GT
Sbjct: 164 TYMHK---NKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKI-----GT 215
Query: 502 MGYLDPEYYRNFQLTDKSDVYSFGVVLLELLT 533
Y+ PE +K DV+S GV+L LL+
Sbjct: 216 AYYIAPEVLHG-TYDEKCDVWSTGVILYILLS 246
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 64/235 (27%), Positives = 108/235 (45%), Gaps = 45/235 (19%)
Query: 332 FSKDNL-----IGTGGFGEVFK----GILDD----GTVTAIKRAKLGNTKG--TDLVLNE 376
F +D L +G G FG+V GI D A+K K T+ +DLV +E
Sbjct: 32 FPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLV-SE 90
Query: 377 VRILCQV-NHRSLVRLLGCCVELDQTLMIYEYIPNGTLFDHLHCDFTGKWPP-------- 427
+ ++ + H++++ LLG C + +I Y G L ++L + PP
Sbjct: 91 MEMMKMIGKHKNIINLLGACTQDGPLYVIVAYASKGNLREYLRA----RRPPGMEYSYDI 146
Query: 428 -------LPWHLRLVIAHQIAEGLTYLHSAAVPPIYHRDVKSSNILLDEKLNAKVSDFGL 480
+ + + +Q+A G+ YL S HRD+ + N+L+ E K++DFGL
Sbjct: 147 NRVPEEQMTFKDLVSCTYQLARGMEYLASQKC---IHRDLAARNVLVTENNVMKIADFGL 203
Query: 481 SRLVERTETNDSHIFTTAQGTM--GYLDPEYYRNFQLTDKSDVYSFGVVLLELLT 533
+R + N + T G + ++ PE + T +SDV+SFGV++ E+ T
Sbjct: 204 ARDI----NNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 66/212 (31%), Positives = 95/212 (44%), Gaps = 25/212 (11%)
Query: 332 FSKDNLIGTGGFGEV-FKGILDDGTVTAIKR----AKLGNTKGTDLVLNEVRILCQVNHR 386
FS IG G FG V F + + V AIK+ K N K D++ EVR L ++ H
Sbjct: 56 FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDII-KEVRFLQKLRHP 114
Query: 387 SLVRLLGCCVELDQTLMIYEYIPNGTLFDHLHCDFTGKWPPLPWHLRLVIAHQIAEGLTY 446
+ ++ GC + ++ EY G+ D L PL + H +GL Y
Sbjct: 115 NTIQYRGCYLREHTAWLVMEYCL-GSASDLLEVHKK----PLQEVEIAAVTHGALQGLAY 169
Query: 447 LHSAAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDSHIFTTAQGTMGYLD 506
LHS + HRDVK+ NILL E K+ DFG + ++ ++ F GT ++
Sbjct: 170 LHSHN---MIHRDVKAGNILLSEPGLVKLGDFGSASIMA-----PANXFV---GTPYWMA 218
Query: 507 PEYYRNF---QLTDKSDVYSFGVVLLELLTSK 535
PE Q K DV+S G+ +EL K
Sbjct: 219 PEVILAMDEGQYDGKVDVWSLGITCIELAERK 250
>pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
pdb|3LCS|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 344
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 65/235 (27%), Positives = 106/235 (45%), Gaps = 23/235 (9%)
Query: 313 AGKSARIFTGKEIRRATNNFSKDNLIGTGGFGEVFKGILD------DGTVTAIKRAKLGN 366
AGK++ I KE+ R N + +G G FGEV++G + A+K
Sbjct: 33 AGKTSSISDLKEVPR--KNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVC 90
Query: 367 TKGTDL-VLNEVRILCQVNHRSLVRLLGCCVELDQTLMIYEYIPNGTLFDHLHCDFTGKW 425
++ +L L E I+ + NH+++VR +G ++ ++ E + G L L T
Sbjct: 91 SEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLR--ETRPR 148
Query: 426 PPLPWHLRLV----IAHQIAEGLTYLHSAAVPPIYHRDVKSSNILL---DEKLNAKVSDF 478
P P L ++ +A IA G YL HRD+ + N LL AK+ DF
Sbjct: 149 PSQPSSLAMLDLLHVARDIACGCQYLEENH---FIHRDIAARNCLLTCPGPGRVAKIGDF 205
Query: 479 GLSRLVERTETNDSHIFTTAQGTMGYLDPEYYRNFQLTDKSDVYSFGVVLLELLT 533
G++R + R A + ++ PE + T K+D +SFGV+L E+ +
Sbjct: 206 GMARDIYRAGYYRKG--GCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 258
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 74/297 (24%), Positives = 126/297 (42%), Gaps = 47/297 (15%)
Query: 326 RRATNNFSKDNLIGTGGFGEV-FKGILDDGTVTAIKRAKLGNTKGTDLVLNEVRILCQVN 384
R +NF K IG G G V + G + A+K+ L + +L+ NEV I+
Sbjct: 73 RSYLDNFIK---IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQ 129
Query: 385 HRSLVRLLGCCVELDQTLMIYEYIPNGTLFDHLHCDFTGKWPPLPWHLRL------VIAH 438
H ++V + + D+ ++ E++ G L D + H R+ +
Sbjct: 130 HENVVEMYNSYLVGDELWVVMEFLEGGALTD------------IVTHTRMNEEQIAAVCL 177
Query: 439 QIAEGLTYLHSAAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDSHIFTTA 498
+ + L+ LH+ V HRD+KS +ILL K+SDFG V + +
Sbjct: 178 AVLQALSVLHAQGV---IHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLV--- 231
Query: 499 QGTMGYLDPEYYRNFQLTDKSDVYSFGVVLLELLTSK---------KAIDFNREE----- 544
GT ++ PE + D++S G++++E++ + KA+ R+
Sbjct: 232 -GTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLPPRL 290
Query: 545 ENVNLVV-YMKKIMDEERLMEVVDPVLKERATHLDLETMKALGLLAASCLDERRQNR 600
+N++ V +K +D RL+ V DP + A L A AS + RQNR
Sbjct: 291 KNLHKVSPSLKGFLD--RLL-VRDPAQRATAAELLKHPFLAKAGPPASIVPLMRQNR 344
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 64/263 (24%), Positives = 113/263 (42%), Gaps = 18/263 (6%)
Query: 289 NEHMKKETKKLLIKQREEMLNAKAAGKSARI-FTGKEIRRATNNFSKDNLIGTGGFGEVF 347
NE ++++ ++ I Q + K A ++ G R +F+ ++G G FG+V
Sbjct: 299 NEELRQKFERAKIGQGTKAPEEKTANTISKFDNNGNRDRMKLTDFNFLMVLGKGSFGKVM 358
Query: 348 ----KGILDDGTVTAIKRAKLGNTKGTDLVLNEVRILCQVNHRSLVRLLGCCVE-LDQTL 402
KG + V +K+ + + + E R+L + L C + +D+
Sbjct: 359 LSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLY 418
Query: 403 MIYEYIPNGTLFDHLHCDFTGKWPPLPWHLRLVIAHQIAEGLTYLHSAAVPPIYHRDVKS 462
+ EY+ G L H+ K P + A +IA GL +L S I +RD+K
Sbjct: 419 FVMEYVNGGDLMYHIQQVGRFKEPHA-----VFYAAEIAIGLFFLQSKG---IIYRDLKL 470
Query: 463 SNILLDEKLNAKVSDFGLSRLVERTETNDSHIFTTAQGTMGYLDPEYYRNFQLTDKSDVY 522
N++LD + + K++DFG+ + D GT Y+ PE D +
Sbjct: 471 DNVMLDSEGHIKIADFGMC----KENIWDGVTTKXFCGTPDYIAPEIIAYQPYGKSVDWW 526
Query: 523 SFGVVLLELLTSKKAIDFNREEE 545
+FGV+L E+L + + E+E
Sbjct: 527 AFGVLLYEMLAGQAPFEGEDEDE 549
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 100/212 (47%), Gaps = 21/212 (9%)
Query: 329 TNNFSKDNLIGTGGFGEVF----KGILDDGTVTAIKRAKLGNTKGTDLVLNEVRILCQVN 384
++ + ++G G FGEV K + V I + ++ + +L EV++L Q++
Sbjct: 25 SDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLD 84
Query: 385 HRSLVRLLGCCVELDQTLMIYEYIPNGTLFDHLHCDFTGKWPPLPWHLRLVIAHQIAEGL 444
H ++++L + ++ E G LFD + + K R++ Q+ G+
Sbjct: 85 HPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEI---ISRKRFSEVDAARII--RQVLSGI 139
Query: 445 TYLHSAAVPPIYHRDVKSSNILLDEK---LNAKVSDFGLSRLVERTETNDSHIFTTAQGT 501
TY+H I HRD+K N+LL+ K N ++ DFGLS E ++ I GT
Sbjct: 140 TYMHK---NKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKI-----GT 191
Query: 502 MGYLDPEYYRNFQLTDKSDVYSFGVVLLELLT 533
Y+ PE +K DV+S GV+L LL+
Sbjct: 192 AYYIAPEVLHG-TYDEKCDVWSTGVILYILLS 222
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/205 (30%), Positives = 97/205 (47%), Gaps = 26/205 (12%)
Query: 338 IGTGGFGEVFKGILDDGTVTAIKRA------KLGNTKGTDLVLNEVRILCQVNHRSLVRL 391
+G+G +GEV +L VT ++RA +T +L EV +L ++H ++++L
Sbjct: 45 LGSGAYGEV---LLCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLDHPNIMKL 101
Query: 392 LGCCVELDQTLMIYEYIPNGTLFDHLHCDFTGKWPPLPWHLRLVIAHQIAEGLTYLHSAA 451
+ ++ E G LFD + K+ + VI Q+ G+TYLH
Sbjct: 102 YDFFEDKRNYYLVMECYKGGELFDEIIHRM--KFNEVD---AAVIIKQVLSGVTYLHK-- 154
Query: 452 VPPIYHRDVKSSNILLDEKLN---AKVSDFGLSRLVERTETNDSHIFTTAQGTMGYLDPE 508
I HRD+K N+LL+ K K+ DFGLS + E + + GT Y+ PE
Sbjct: 155 -HNIVHRDLKPENLLLESKEKDALIKIVDFGLSAVFENQKKMKERL-----GTAYYIAPE 208
Query: 509 YYRNFQLTDKSDVYSFGVVLLELLT 533
R + +K DV+S GV+L LL
Sbjct: 209 VLRK-KYDEKCDVWSIGVILFILLA 232
>pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 367
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 65/235 (27%), Positives = 106/235 (45%), Gaps = 23/235 (9%)
Query: 313 AGKSARIFTGKEIRRATNNFSKDNLIGTGGFGEVFKGILD------DGTVTAIKRAKLGN 366
AGK++ I KE+ R N + +G G FGEV++G + A+K
Sbjct: 56 AGKTSSISDLKEVPR--KNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVC 113
Query: 367 TKGTDL-VLNEVRILCQVNHRSLVRLLGCCVELDQTLMIYEYIPNGTLFDHLHCDFTGKW 425
++ +L L E I+ + NH+++VR +G ++ ++ E + G L L T
Sbjct: 114 SEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLR--ETRPR 171
Query: 426 PPLPWHLRLV----IAHQIAEGLTYLHSAAVPPIYHRDVKSSNILL---DEKLNAKVSDF 478
P P L ++ +A IA G YL HRD+ + N LL AK+ DF
Sbjct: 172 PSQPSSLAMLDLLHVARDIACGCQYLEENH---FIHRDIAARNCLLTCPGPGRVAKIGDF 228
Query: 479 GLSRLVERTETNDSHIFTTAQGTMGYLDPEYYRNFQLTDKSDVYSFGVVLLELLT 533
G++R + R A + ++ PE + T K+D +SFGV+L E+ +
Sbjct: 229 GMARDIYRAGYYRKG--GCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 281
>pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma
Kinase Catalytic Domain
pdb|4FNY|A Chain A, Crystal Structure Of The R1275q Anaplastic Lymphoma Kinase
Catalytic Domain In Complex With A Benzoxazole Inhibitor
Length = 327
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 65/239 (27%), Positives = 107/239 (44%), Gaps = 23/239 (9%)
Query: 309 NAKAAGKSARIFTGKEIRRATNNFSKDNLIGTGGFGEVFKGILD------DGTVTAIKRA 362
N AGK++ I KE+ R N + +G G FGEV++G + A+K
Sbjct: 12 NYSFAGKTSSISDLKEVPR--KNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTL 69
Query: 363 KLGNTKGTDL-VLNEVRILCQVNHRSLVRLLGCCVELDQTLMIYEYIPNGTLFDHLHCDF 421
++ +L L E I+ + NH+++VR +G ++ ++ E + G L L
Sbjct: 70 PEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLR--E 127
Query: 422 TGKWPPLPWHLRLV----IAHQIAEGLTYLHSAAVPPIYHRDVKSSNILL---DEKLNAK 474
T P P L ++ +A IA G YL HRD+ + N LL AK
Sbjct: 128 TRPRPSQPSSLAMLDLLHVARDIACGCQYLEENH---FIHRDIAARNCLLTCPGPGRVAK 184
Query: 475 VSDFGLSRLVERTETNDSHIFTTAQGTMGYLDPEYYRNFQLTDKSDVYSFGVVLLELLT 533
+ DFG+++ + R A + ++ PE + T K+D +SFGV+L E+ +
Sbjct: 185 IGDFGMAQDIYRASYYRKG--GCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 241
>pdb|1YXS|A Chain A, Crystal Structure Of Kinase Pim1 With P123m Mutation
Length = 293
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 70/250 (28%), Positives = 113/250 (45%), Gaps = 28/250 (11%)
Query: 323 KEIRRATNNFSKDNLIGTGGFGEVFKGI-LDDGTVTAIKRAK------LGNTKGTDLVLN 375
KE + + L+G+GGFG V+ GI + D AIK + G V
Sbjct: 1 KEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPM 60
Query: 376 EVRILCQVN--HRSLVRLLGCCVELDQTLMIYEYI-PNGTLFDHLHCDFTGKWPPLPWHL 432
EV +L +V+ ++RLL D ++I E + P LF DF + L L
Sbjct: 61 EVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERMEPVQDLF-----DFITERGALQEEL 115
Query: 433 RLVIAHQIAEGLTYLHSAAVPPIYHRDVKSSNILLD-EKLNAKVSDFGLSRLVERTETND 491
Q+ E + + H+ V HRD+K NIL+D + K+ DFG L++ T
Sbjct: 116 ARSFFWQVLEAVRHCHNCGV---LHRDIKDENILIDLNRGELKLIDFGSGALLKDT---- 168
Query: 492 SHIFTTAQGTMGYLDPEYYRNFQLTDKS-DVYSFGVVLLELLTSKKAIDFNREEENVNLV 550
++T GT Y PE+ R + +S V+S G++L +++ I F +EE +
Sbjct: 169 --VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGD--IPFEHDEEIIRGQ 224
Query: 551 VYMKKIMDEE 560
V+ ++ + E
Sbjct: 225 VFFRQRVSSE 234
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 66/234 (28%), Positives = 107/234 (45%), Gaps = 35/234 (14%)
Query: 323 KEIRRATNNFSKDNLIGTGGFGEVFKGIL------DDGTVTAIKRAKLGNTKG--TDLVL 374
KEI + F ++ +G FG+V+KG L + AIK K +G +
Sbjct: 21 KEISLSAVRFMEE--LGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLK-DKAEGPLREEFR 77
Query: 375 NEVRILCQVNHRSLVRLLGCCVELDQTLMIYEYIPNGTLFDHL-----HCDF-------- 421
+E + ++ H ++V LLG + MI+ Y +G L + L H D
Sbjct: 78 HEAMLRARLQHPNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRT 137
Query: 422 --TGKWPPLPWHLRLVIAHQIAEGLTYLHSAAVPPIYHRDVKSSNILLDEKLNAKVSDFG 479
+ PP HL QIA G+ YL S V H+D+ + N+L+ +KLN K+SD G
Sbjct: 138 VKSALEPPDFVHL----VAQIAAGMEYLSSHHV---VHKDLATRNVLVYDKLNVKISDLG 190
Query: 480 LSRLVERTETNDSHIFTTAQGTMGYLDPEYYRNFQLTDKSDVYSFGVVLLELLT 533
L R E + + + + ++ PE + + SD++S+GVVL E+ +
Sbjct: 191 LFR--EVYAADYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFS 242
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 66/212 (31%), Positives = 95/212 (44%), Gaps = 25/212 (11%)
Query: 332 FSKDNLIGTGGFGEV-FKGILDDGTVTAIKR----AKLGNTKGTDLVLNEVRILCQVNHR 386
FS IG G FG V F + + V AIK+ K N K D++ EVR L ++ H
Sbjct: 17 FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDII-KEVRFLQKLRHP 75
Query: 387 SLVRLLGCCVELDQTLMIYEYIPNGTLFDHLHCDFTGKWPPLPWHLRLVIAHQIAEGLTY 446
+ ++ GC + ++ EY G+ D L PL + H +GL Y
Sbjct: 76 NTIQYRGCYLREHTAWLVMEYCL-GSASDLLEVHKK----PLQEVEIAAVTHGALQGLAY 130
Query: 447 LHSAAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDSHIFTTAQGTMGYLD 506
LHS + HRDVK+ NILL E K+ DFG + ++ ++ F GT ++
Sbjct: 131 LHSHN---MIHRDVKAGNILLSEPGLVKLGDFGSASIMA-----PANXFV---GTPYWMA 179
Query: 507 PEYYRNF---QLTDKSDVYSFGVVLLELLTSK 535
PE Q K DV+S G+ +EL K
Sbjct: 180 PEVILAMDEGQYDGKVDVWSLGITCIELAERK 211
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 64/235 (27%), Positives = 108/235 (45%), Gaps = 45/235 (19%)
Query: 332 FSKDNL-----IGTGGFGEVFK----GILDD----GTVTAIKRAKLGNTKG--TDLVLNE 376
F +D L +G G FG+V GI D A+K K T+ +DLV +E
Sbjct: 32 FPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLV-SE 90
Query: 377 VRILCQV-NHRSLVRLLGCCVELDQTLMIYEYIPNGTLFDHLHCDFTGKWPP-------- 427
+ ++ + H++++ LLG C + +I Y G L ++L + PP
Sbjct: 91 MEMMKMIGKHKNIINLLGACTQDGPLYVIVGYASKGNLREYLRA----RRPPGMEYSYDI 146
Query: 428 -------LPWHLRLVIAHQIAEGLTYLHSAAVPPIYHRDVKSSNILLDEKLNAKVSDFGL 480
+ + + +Q+A G+ YL S HRD+ + N+L+ E K++DFGL
Sbjct: 147 NRVPEEQMTFKDLVSCTYQLARGMEYLASQKC---IHRDLAARNVLVTENNVMKIADFGL 203
Query: 481 SRLVERTETNDSHIFTTAQGTM--GYLDPEYYRNFQLTDKSDVYSFGVVLLELLT 533
+R + N + T G + ++ PE + T +SDV+SFGV++ E+ T
Sbjct: 204 ARDI----NNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 53/214 (24%), Positives = 94/214 (43%), Gaps = 29/214 (13%)
Query: 326 RRATNNFSKDNLIGTGGFGEV-FKGILDDGTVTAIKRAKLGNTKGTDLVLNEVRILCQVN 384
R +NF K IG G G V + G + A+K+ L + +L+ NEV I+
Sbjct: 28 RSYLDNFIK---IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQ 84
Query: 385 HRSLVRLLGCCVELDQTLMIYEYIPNGTLFDHLHCDFTGKWPPLPWHLRL------VIAH 438
H ++V + + D+ ++ E++ G L D + H R+ +
Sbjct: 85 HENVVEMYNSYLVGDELWVVMEFLEGGALTD------------IVTHTRMNEEQIAAVCL 132
Query: 439 QIAEGLTYLHSAAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDSHIFTTA 498
+ + L+ LH+ V HRD+KS +ILL K+SDFG V + +
Sbjct: 133 AVLQALSVLHAQGV---IHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLV--- 186
Query: 499 QGTMGYLDPEYYRNFQLTDKSDVYSFGVVLLELL 532
GT ++ PE + D++S G++++E++
Sbjct: 187 -GTPYWMAPELISRLPYGPEVDIWSLGIMVIEMV 219
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 66/216 (30%), Positives = 96/216 (44%), Gaps = 19/216 (8%)
Query: 329 TNNFSKDNLIGTGGFGEV-FKGILDDGTVTAIK--RAKLGNTKGTDLVLN-EVRILCQVN 384
++ + ++G GG EV L D A+K RA L L E + +N
Sbjct: 11 SDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALN 70
Query: 385 HRSLVRLLGCCVELDQT----LMIYEYIPNGTLFDHLHCDFTGKWPPLPWHLRLVIAHQI 440
H ++V + ++ EY+ TL D +H + P P VIA
Sbjct: 71 HPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTE----GPMTPKRAIEVIA-DA 125
Query: 441 AEGLTYLHSAAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDSHIFTTAQ- 499
+ L + H I HRDVK +NIL+ KV DFG++R + ++ +S T A
Sbjct: 126 CQALNFSHQNG---IIHRDVKPANILISATNAVKVVDFGIARAI--ADSGNSVXQTAAVI 180
Query: 500 GTMGYLDPEYYRNFQLTDKSDVYSFGVVLLELLTSK 535
GT YL PE R + +SDVYS G VL E+LT +
Sbjct: 181 GTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGE 216
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 53/214 (24%), Positives = 94/214 (43%), Gaps = 29/214 (13%)
Query: 326 RRATNNFSKDNLIGTGGFGEV-FKGILDDGTVTAIKRAKLGNTKGTDLVLNEVRILCQVN 384
R +NF K IG G G V + G + A+K+ L + +L+ NEV I+
Sbjct: 30 RSYLDNFIK---IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQ 86
Query: 385 HRSLVRLLGCCVELDQTLMIYEYIPNGTLFDHLHCDFTGKWPPLPWHLRL------VIAH 438
H ++V + + D+ ++ E++ G L D + H R+ +
Sbjct: 87 HENVVEMYNSYLVGDELWVVMEFLEGGALTD------------IVTHTRMNEEQIAAVCL 134
Query: 439 QIAEGLTYLHSAAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDSHIFTTA 498
+ + L+ LH+ V HRD+KS +ILL K+SDFG V + +
Sbjct: 135 AVLQALSVLHAQGV---IHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLV--- 188
Query: 499 QGTMGYLDPEYYRNFQLTDKSDVYSFGVVLLELL 532
GT ++ PE + D++S G++++E++
Sbjct: 189 -GTPYWMAPELISRLPYGPEVDIWSLGIMVIEMV 221
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 59/229 (25%), Positives = 101/229 (44%), Gaps = 21/229 (9%)
Query: 324 EIRRATNNFSKDNLIGTGGFGEVF----KGILDDGTVTAIKRAKLGNTKGTDLVLNEVRI 379
+I+ +F ++G G FG+VF K + A+K+ + + + E R+
Sbjct: 12 QIKLKIEDFELHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRV 71
Query: 380 LCQVNHRSLVRLLGCCVELDQTLM-IYEYIPNGTLFDHLHCDFTGKWPPLPWHLRLVIAH 438
L + + C + + L + EY+ G L H+ ++ A
Sbjct: 72 LSLAWEHPFLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQSCHKFDLSRATFY-----AA 126
Query: 439 QIAEGLTYLHSAAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSR--LVERTETNDSHIFT 496
+I GL +LHS I +RD+K NILLD+ + K++DFG+ + ++ +TN+
Sbjct: 127 EIILGLQFLHSKG---IVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAKTNE----- 178
Query: 497 TAQGTMGYLDPEYYRNFQLTDKSDVYSFGVVLLELLTSKKAIDFNREEE 545
GT Y+ PE + D +SFGV+L E+L + EEE
Sbjct: 179 -FCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEE 226
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 53/214 (24%), Positives = 94/214 (43%), Gaps = 29/214 (13%)
Query: 326 RRATNNFSKDNLIGTGGFGEV-FKGILDDGTVTAIKRAKLGNTKGTDLVLNEVRILCQVN 384
R +NF K IG G G V + G + A+K+ L + +L+ NEV I+
Sbjct: 19 RSYLDNFIK---IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQ 75
Query: 385 HRSLVRLLGCCVELDQTLMIYEYIPNGTLFDHLHCDFTGKWPPLPWHLRL------VIAH 438
H ++V + + D+ ++ E++ G L D + H R+ +
Sbjct: 76 HENVVEMYNSYLVGDELWVVMEFLEGGALTD------------IVTHTRMNEEQIAAVCL 123
Query: 439 QIAEGLTYLHSAAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDSHIFTTA 498
+ + L+ LH+ V HRD+KS +ILL K+SDFG V + +
Sbjct: 124 AVLQALSVLHAQGV---IHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLV--- 177
Query: 499 QGTMGYLDPEYYRNFQLTDKSDVYSFGVVLLELL 532
GT ++ PE + D++S G++++E++
Sbjct: 178 -GTPYWMAPELISRLPYGPEVDIWSLGIMVIEMV 210
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 69/222 (31%), Positives = 103/222 (46%), Gaps = 34/222 (15%)
Query: 325 IRRATNNFSKDNLIGTGGFGEVFK-GILDDGTVTAIK---RAKLGNTKGTDLVLNEVRIL 380
I N+FS +IG GGFGEV+ D G + A+K + ++ +G L LNE RI+
Sbjct: 184 IHLTMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNE-RIM 242
Query: 381 CQVNHRSLVRLLGC----CVEL-----DQTLMIYEYIPNGTLFDHLHCDFTGKWPPLPWH 431
SLV C C+ D+ I + + G L H H G +
Sbjct: 243 L-----SLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDL--HYHLSQHGVFSEADMR 295
Query: 432 LRLVIAHQIAEGLTYLHSAAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVERTETND 491
A +I GL ++H+ V +RD+K +NILLDE + ++SD GL+ + + +
Sbjct: 296 F---YAAEIILGLEHMHNRFV---VYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHA 349
Query: 492 SHIFTTAQGTMGYLDPEYYRNFQLTDKS-DVYSFGVVLLELL 532
S GT GY+ PE + D S D +S G +L +LL
Sbjct: 350 S------VGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLL 385
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 69/222 (31%), Positives = 103/222 (46%), Gaps = 34/222 (15%)
Query: 325 IRRATNNFSKDNLIGTGGFGEVFK-GILDDGTVTAIK---RAKLGNTKGTDLVLNEVRIL 380
I N+FS +IG GGFGEV+ D G + A+K + ++ +G L LNE RI+
Sbjct: 184 IHLTMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNE-RIM 242
Query: 381 CQVNHRSLVRLLGC----CVEL-----DQTLMIYEYIPNGTLFDHLHCDFTGKWPPLPWH 431
SLV C C+ D+ I + + G L H H G +
Sbjct: 243 L-----SLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDL--HYHLSQHGVFSEADMR 295
Query: 432 LRLVIAHQIAEGLTYLHSAAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVERTETND 491
A +I GL ++H+ V +RD+K +NILLDE + ++SD GL+ + + +
Sbjct: 296 F---YAAEIILGLEHMHNRFV---VYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHA 349
Query: 492 SHIFTTAQGTMGYLDPEYYRNFQLTDKS-DVYSFGVVLLELL 532
S GT GY+ PE + D S D +S G +L +LL
Sbjct: 350 S------VGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLL 385
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 66/234 (28%), Positives = 107/234 (45%), Gaps = 35/234 (14%)
Query: 323 KEIRRATNNFSKDNLIGTGGFGEVFKGIL------DDGTVTAIKRAKLGNTKG--TDLVL 374
KEI + F ++ +G FG+V+KG L + AIK K +G +
Sbjct: 4 KEISLSAVRFMEE--LGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLK-DKAEGPLREEFR 60
Query: 375 NEVRILCQVNHRSLVRLLGCCVELDQTLMIYEYIPNGTLFDHL-----HCDF-------- 421
+E + ++ H ++V LLG + MI+ Y +G L + L H D
Sbjct: 61 HEAMLRARLQHPNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRT 120
Query: 422 --TGKWPPLPWHLRLVIAHQIAEGLTYLHSAAVPPIYHRDVKSSNILLDEKLNAKVSDFG 479
+ PP HL QIA G+ YL S V H+D+ + N+L+ +KLN K+SD G
Sbjct: 121 VKSALEPPDFVHL----VAQIAAGMEYLSSHHV---VHKDLATRNVLVYDKLNVKISDLG 173
Query: 480 LSRLVERTETNDSHIFTTAQGTMGYLDPEYYRNFQLTDKSDVYSFGVVLLELLT 533
L R E + + + + ++ PE + + SD++S+GVVL E+ +
Sbjct: 174 LFR--EVYAADYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFS 225
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 53/214 (24%), Positives = 94/214 (43%), Gaps = 29/214 (13%)
Query: 326 RRATNNFSKDNLIGTGGFGEV-FKGILDDGTVTAIKRAKLGNTKGTDLVLNEVRILCQVN 384
R +NF K IG G G V + G + A+K+ L + +L+ NEV I+
Sbjct: 23 RSYLDNFIK---IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQ 79
Query: 385 HRSLVRLLGCCVELDQTLMIYEYIPNGTLFDHLHCDFTGKWPPLPWHLRL------VIAH 438
H ++V + + D+ ++ E++ G L D + H R+ +
Sbjct: 80 HENVVEMYNSYLVGDELWVVMEFLEGGALTD------------IVTHTRMNEEQIAAVCL 127
Query: 439 QIAEGLTYLHSAAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDSHIFTTA 498
+ + L+ LH+ V HRD+KS +ILL K+SDFG V + +
Sbjct: 128 AVLQALSVLHAQGV---IHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLV--- 181
Query: 499 QGTMGYLDPEYYRNFQLTDKSDVYSFGVVLLELL 532
GT ++ PE + D++S G++++E++
Sbjct: 182 -GTPYWMAPELISRLPYGPEVDIWSLGIMVIEMV 214
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 65/216 (30%), Positives = 96/216 (44%), Gaps = 19/216 (8%)
Query: 329 TNNFSKDNLIGTGGFGEV-FKGILDDGTVTAIK--RAKLGNTKGTDLVLN-EVRILCQVN 384
++ + ++G GG EV L D A+K RA L L E + +N
Sbjct: 11 SDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALN 70
Query: 385 HRSLVRLLGCCVELDQT----LMIYEYIPNGTLFDHLHCDFTGKWPPLPWHLRLVIAHQI 440
H ++V + ++ EY+ TL D +H + P P VIA
Sbjct: 71 HPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTE----GPMTPKRAIEVIA-DA 125
Query: 441 AEGLTYLHSAAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDSHIFTTAQ- 499
+ L + H I HRDVK +NI++ KV DFG++R + ++ +S T A
Sbjct: 126 CQALNFSHQNG---IIHRDVKPANIMISATNAVKVMDFGIARAI--ADSGNSVTQTAAVI 180
Query: 500 GTMGYLDPEYYRNFQLTDKSDVYSFGVVLLELLTSK 535
GT YL PE R + +SDVYS G VL E+LT +
Sbjct: 181 GTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGE 216
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 65/216 (30%), Positives = 96/216 (44%), Gaps = 19/216 (8%)
Query: 329 TNNFSKDNLIGTGGFGEV-FKGILDDGTVTAIK--RAKLGNTKGTDLVLN-EVRILCQVN 384
++ + ++G GG EV L D A+K RA L L E + +N
Sbjct: 11 SDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALN 70
Query: 385 HRSLVRLLGCCVELDQT----LMIYEYIPNGTLFDHLHCDFTGKWPPLPWHLRLVIAHQI 440
H ++V + ++ EY+ TL D +H + P P VIA
Sbjct: 71 HPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTE----GPMTPKRAIEVIA-DA 125
Query: 441 AEGLTYLHSAAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDSHIFTTAQ- 499
+ L + H I HRDVK +NI++ KV DFG++R + ++ +S T A
Sbjct: 126 CQALNFSHQNG---IIHRDVKPANIMISATNAVKVMDFGIARAI--ADSGNSVTQTAAVI 180
Query: 500 GTMGYLDPEYYRNFQLTDKSDVYSFGVVLLELLTSK 535
GT YL PE R + +SDVYS G VL E+LT +
Sbjct: 181 GTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGE 216
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 69/222 (31%), Positives = 103/222 (46%), Gaps = 34/222 (15%)
Query: 325 IRRATNNFSKDNLIGTGGFGEVFK-GILDDGTVTAIK---RAKLGNTKGTDLVLNEVRIL 380
I N+FS +IG GGFGEV+ D G + A+K + ++ +G L LNE RI+
Sbjct: 184 IHLTMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNE-RIM 242
Query: 381 CQVNHRSLVRLLGC----CVEL-----DQTLMIYEYIPNGTLFDHLHCDFTGKWPPLPWH 431
SLV C C+ D+ I + + G L H H G +
Sbjct: 243 L-----SLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDL--HYHLSQHGVFSEADMR 295
Query: 432 LRLVIAHQIAEGLTYLHSAAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVERTETND 491
A +I GL ++H+ V +RD+K +NILLDE + ++SD GL+ + + +
Sbjct: 296 F---YAAEIILGLEHMHNRFV---VYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHA 349
Query: 492 SHIFTTAQGTMGYLDPEYYRNFQLTDKS-DVYSFGVVLLELL 532
S GT GY+ PE + D S D +S G +L +LL
Sbjct: 350 S------VGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLL 385
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 50/204 (24%), Positives = 97/204 (47%), Gaps = 18/204 (8%)
Query: 332 FSKDNLIGTGGFGEVFKGI-LDDGTVTAIKRAKLGNTKGTDLVLNEVRILCQVNHRSLVR 390
+++ IG G G V+ + + G AI++ L +L++NE+ ++ + + ++V
Sbjct: 23 YTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVN 82
Query: 391 LLGCCVELDQTLMIYEYIPNGTLFDHL--HCDFTGKWPPLPWHLRLVIAHQIAEGLTYLH 448
L + D+ ++ EY+ G+L D + C G+ + + + L +LH
Sbjct: 83 YLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQIA--------AVCRECLQALEFLH 134
Query: 449 SAAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDSHIFTTAQGTMGYLDPE 508
S V HR++KS NILL + K++DFG + ++ S T GT ++ PE
Sbjct: 135 SNQV---IHRNIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRS----TMVGTPYWMAPE 187
Query: 509 YYRNFQLTDKSDVYSFGVVLLELL 532
K D++S G++ +E++
Sbjct: 188 VVTRKAYGPKVDIWSLGIMAIEMI 211
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 61/207 (29%), Positives = 95/207 (45%), Gaps = 21/207 (10%)
Query: 330 NNFSKDNLIGTGGFGEVF----KGILDDGTVTAIKRAKLGNTKGTDLVLNEVRILCQVNH 385
+ F + +GTG FG V K + + + + K+ K + LNE RIL VN
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 386 RSLVRLLGCCVELDQTLMIYEYIPNGTLFDHLHCDFTGKWPPLPWHLRLVIAHQIAEGLT 445
LV+L + M+ EY+ G +F HL G++ P H R A QI
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRR--IGRFSE-P-HARFYAA-QIVLTFE 155
Query: 446 YLHSAAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVE-RTETNDSHIFTTAQGTMGY 504
YLHS + +RD+K N+L+D++ +V+DFG ++ V+ RT GT Y
Sbjct: 156 YLHSL---DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT--------WXLCGTPEY 204
Query: 505 LDPEYYRNFQLTDKSDVYSFGVVLLEL 531
L P + D ++ GV++ E+
Sbjct: 205 LAPAIILSKGYNKAVDWWALGVLIYEM 231
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 69/222 (31%), Positives = 103/222 (46%), Gaps = 34/222 (15%)
Query: 325 IRRATNNFSKDNLIGTGGFGEVFK-GILDDGTVTAIK---RAKLGNTKGTDLVLNEVRIL 380
I N+FS +IG GGFGEV+ D G + A+K + ++ +G L LNE RI+
Sbjct: 183 IHLTMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNE-RIM 241
Query: 381 CQVNHRSLVRLLGC----CVEL-----DQTLMIYEYIPNGTLFDHLHCDFTGKWPPLPWH 431
SLV C C+ D+ I + + G L H H G +
Sbjct: 242 L-----SLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDL--HYHLSQHGVFSEADMR 294
Query: 432 LRLVIAHQIAEGLTYLHSAAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVERTETND 491
A +I GL ++H+ V +RD+K +NILLDE + ++SD GL+ + + +
Sbjct: 295 F---YAAEIILGLEHMHNRFV---VYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHA 348
Query: 492 SHIFTTAQGTMGYLDPEYYRNFQLTDKS-DVYSFGVVLLELL 532
S GT GY+ PE + D S D +S G +L +LL
Sbjct: 349 S------VGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLL 384
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 97/219 (44%), Gaps = 18/219 (8%)
Query: 326 RRATNNFSKDNLIGTGGFGEVFKGILD-DGTVTAIK---RAKLGNTKGTDLVLNEVRILC 381
R ++ + +G G FG+V G G A+K R K+ + + E++ L
Sbjct: 7 RVKIGHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLK 66
Query: 382 QVNHRSLVRLLGCCVELDQTLMIYEYIPNGTLFDHLHCDFTGKWPPLPWHLRLVIAHQIA 441
H +++L M+ EY+ G LFD++ C G+ + RL QI
Sbjct: 67 LFRHPHIIKLYQVISTPTDFFMVMEYVSGGELFDYI-CK-HGRVEEMEAR-RLF--QQIL 121
Query: 442 EGLTYLHSAAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDSHIFTTAQGT 501
+ Y H V HRD+K N+LLD +NAK++DFGLS ++ +D T+ G+
Sbjct: 122 SAVDYCHRHMV---VHRDLKPENVLLDAHMNAKIADFGLSNMM-----SDGEFLRTSCGS 173
Query: 502 MGYLDPEYYRN-FQLTDKSDVYSFGVVLLELLTSKKAID 539
Y PE + D++S GV+L LL D
Sbjct: 174 PNYAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPFD 212
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 69/240 (28%), Positives = 109/240 (45%), Gaps = 39/240 (16%)
Query: 338 IGTGGFGEVFKGILDD-GTVTAIKRAKLG-NTKGTDLVLNEVRILCQVNHRSLVRL---- 391
+GTGGFG V + I D G AIK+ + + K + E++I+ ++NH ++V
Sbjct: 22 LGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSAREVP 81
Query: 392 --LGCCVELDQTLMIYEYIPNGTLFDHLH----CDFTGKWPPLPWHLRLVIAHQIAEGLT 445
L D L+ EY G L +L+ C + P +R +++ I+ L
Sbjct: 82 DGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGP-----IRTLLSD-ISSALR 135
Query: 446 YLHSAAVPPIYHRDVKSSNILLD---EKLNAKVSDFGLSRLVERTETNDSHIFTTAQGTM 502
YLH I HRD+K NI+L ++L K+ D G ++ E + + T GT+
Sbjct: 136 YLHENR---IIHRDLKPENIVLQPGPQRLIHKIIDLGYAK-----ELDQGELCTEFVGTL 187
Query: 503 GYLDPEYYRNFQLTDKSDVYSFGVVLLELLTSKKAIDFN----------REEENVNLVVY 552
YL PE + T D +SFG + E +T + N RE+ N ++VVY
Sbjct: 188 QYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRPFLPNWQPVQWHGKVREKSNEHIVVY 247
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 69/240 (28%), Positives = 109/240 (45%), Gaps = 39/240 (16%)
Query: 338 IGTGGFGEVFKGILDD-GTVTAIKRAKLG-NTKGTDLVLNEVRILCQVNHRSLVRL---- 391
+GTGGFG V + I D G AIK+ + + K + E++I+ ++NH ++V
Sbjct: 23 LGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSAREVP 82
Query: 392 --LGCCVELDQTLMIYEYIPNGTLFDHLH----CDFTGKWPPLPWHLRLVIAHQIAEGLT 445
L D L+ EY G L +L+ C + P +R +++ I+ L
Sbjct: 83 DGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGP-----IRTLLSD-ISSALR 136
Query: 446 YLHSAAVPPIYHRDVKSSNILLD---EKLNAKVSDFGLSRLVERTETNDSHIFTTAQGTM 502
YLH I HRD+K NI+L ++L K+ D G ++ E + + T GT+
Sbjct: 137 YLHENR---IIHRDLKPENIVLQPGPQRLIHKIIDLGYAK-----ELDQGELCTEFVGTL 188
Query: 503 GYLDPEYYRNFQLTDKSDVYSFGVVLLELLTSKKAIDFN----------REEENVNLVVY 552
YL PE + T D +SFG + E +T + N RE+ N ++VVY
Sbjct: 189 QYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRPFLPNWQPVQWHGKVREKSNEHIVVY 248
>pdb|3UIX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Small
Molecule Inhibitor
pdb|3UMX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indol-3-Yl)methylene]-7-(Azepan-1-Ylmethyl)-6-
Hydroxybenzofuran- 3(2h)-One
pdb|4ENX|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
Inhibitor (2e,5z)-2-
(2-Chlorophenylimino)-5-(4-Hydroxy-3-
Nitrobenzylidene)thiazolidin-4- One
pdb|4ENY|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
(2e,5z)-2-(2-
Chlorophenylimino)-5-(4-Hydroxy-3-
Methoxybenzylidene)thiazolidin-4- One
pdb|3UMW|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indazol-3-Yl)methylene]-6-Methoxy-7-(Piperazin-1-
Ylmethyl)benzofuran- 3(2h)-One
Length = 298
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 70/250 (28%), Positives = 112/250 (44%), Gaps = 28/250 (11%)
Query: 323 KEIRRATNNFSKDNLIGTGGFGEVFKGI-LDDGTVTAIKRAK------LGNTKGTDLVLN 375
KE + + L+G+GGFG V+ GI + D AIK + G V
Sbjct: 2 KEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPM 61
Query: 376 EVRILCQVN--HRSLVRLLGCCVELDQTLMIYEYI-PNGTLFDHLHCDFTGKWPPLPWHL 432
EV +L +V+ ++RLL D ++I E P LF DF + L L
Sbjct: 62 EVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLF-----DFITERGALQEEL 116
Query: 433 RLVIAHQIAEGLTYLHSAAVPPIYHRDVKSSNILLD-EKLNAKVSDFGLSRLVERTETND 491
Q+ E + + H+ V HRD+K NIL+D + K+ DFG L++ T
Sbjct: 117 ARSFFWQVLEAVRHCHNCGV---LHRDIKDENILIDLNRGELKLIDFGSGALLKDT---- 169
Query: 492 SHIFTTAQGTMGYLDPEYYRNFQLTDKS-DVYSFGVVLLELLTSKKAIDFNREEENVNLV 550
++T GT Y PE+ R + +S V+S G++L +++ I F +EE +
Sbjct: 170 --VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGD--IPFEHDEEIIRGQ 225
Query: 551 VYMKKIMDEE 560
V+ ++ + E
Sbjct: 226 VFFRQRVSSE 235
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 62/218 (28%), Positives = 105/218 (48%), Gaps = 27/218 (12%)
Query: 328 ATNNFSKDNLIGTGGFGEVFKGILD-DGTVTAIKRAKLGN-TKGT-DLVLNEVRILCQVN 384
+ NF K IG G +G V+K G V A+K+ +L T+G + E+ +L ++N
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 385 HRSLVRLLGCCVELDQTLMIYEYIPNGTLFDHLHCD-FTGKWPPLPWHLRLVIAHQIAEG 443
H ++V+LL ++ +++E++ + L D + TG PLP L Q+ +G
Sbjct: 61 HPNIVKLLDVIHTENKLYLVFEFL-HQDLKDFMDASALTGI--PLP--LIKSYLFQLLQG 115
Query: 444 LTYLHSAAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDSHIFTTAQGTMG 503
L + HS V HRD+K N+L++ + K++DFGL+R H T+
Sbjct: 116 LAFCHSHRV---LHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVV----TLW 168
Query: 504 YLDPE------YYRNFQLTDKSDVYSFGVVLLELLTSK 535
Y PE YY + D++S G + E++T +
Sbjct: 169 YRAPEILLGCKYY-----STAVDIWSLGCIFAEMVTRR 201
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 55/225 (24%), Positives = 100/225 (44%), Gaps = 17/225 (7%)
Query: 326 RRATNNFSKDNLIGTGGFGEVF----KGILDDGTVTAIKRAKLGNTKGTDLVLNEVRILC 381
R +F+ ++G G FG+V KG + + +K+ + + + E R+L
Sbjct: 15 RVKLTDFNFLMVLGKGSFGKVMLADRKGTEELYAIKILKKDVVIQDDDVECTMVEKRVLA 74
Query: 382 QVNHRSLVRLLGCCVE-LDQTLMIYEYIPNGTLFDHLHCDFTGKWPPLPWHLRLVIAHQI 440
++ + L C + +D+ + EY+ G L H+ K P ++ A +I
Sbjct: 75 LLDKPPFLTQLHSCFQTVDRLYFVMEYVNGGDLMYHIQQVGKFKEPQAVFY-----AAEI 129
Query: 441 AEGLTYLHSAAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDSHIFTTAQG 500
+ GL +LH I +RD+K N++LD + + K++DFG+ + D G
Sbjct: 130 SIGLFFLHKRG---IIYRDLKLDNVMLDSEGHIKIADFGMC----KEHMMDGVTTREFCG 182
Query: 501 TMGYLDPEYYRNFQLTDKSDVYSFGVVLLELLTSKKAIDFNREEE 545
T Y+ PE D +++GV+L E+L + D E+E
Sbjct: 183 TPDYIAPEIIAYQPYGKSVDWWAYGVLLYEMLAGQPPFDGEDEDE 227
>pdb|3R00|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R01|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R02|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R04|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3VBQ|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBT|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBV|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBW|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBX|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBY|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VC4|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
Length = 299
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 70/250 (28%), Positives = 112/250 (44%), Gaps = 28/250 (11%)
Query: 323 KEIRRATNNFSKDNLIGTGGFGEVFKGI-LDDGTVTAIKRAK------LGNTKGTDLVLN 375
KE + + L+G+GGFG V+ GI + D AIK + G V
Sbjct: 2 KEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPM 61
Query: 376 EVRILCQVN--HRSLVRLLGCCVELDQTLMIYEYI-PNGTLFDHLHCDFTGKWPPLPWHL 432
EV +L +V+ ++RLL D ++I E P LF DF + L L
Sbjct: 62 EVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLF-----DFITERGALQEEL 116
Query: 433 RLVIAHQIAEGLTYLHSAAVPPIYHRDVKSSNILLD-EKLNAKVSDFGLSRLVERTETND 491
Q+ E + + H+ V HRD+K NIL+D + K+ DFG L++ T
Sbjct: 117 ARSFFWQVLEAVRHCHNCGV---LHRDIKDENILIDLNRGELKLIDFGSGALLKDT---- 169
Query: 492 SHIFTTAQGTMGYLDPEYYRNFQLTDKS-DVYSFGVVLLELLTSKKAIDFNREEENVNLV 550
++T GT Y PE+ R + +S V+S G++L +++ I F +EE +
Sbjct: 170 --VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGD--IPFEHDEEIIRGQ 225
Query: 551 VYMKKIMDEE 560
V+ ++ + E
Sbjct: 226 VFFRQRVSSE 235
>pdb|3JXW|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JY0|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JYA|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
Length = 294
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 70/250 (28%), Positives = 112/250 (44%), Gaps = 28/250 (11%)
Query: 323 KEIRRATNNFSKDNLIGTGGFGEVFKGI-LDDGTVTAIKRAK------LGNTKGTDLVLN 375
KE + + L+G+GGFG V+ GI + D AIK + G V
Sbjct: 2 KEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPM 61
Query: 376 EVRILCQVN--HRSLVRLLGCCVELDQTLMIYEYI-PNGTLFDHLHCDFTGKWPPLPWHL 432
EV +L +V+ ++RLL D ++I E P LF DF + L L
Sbjct: 62 EVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLF-----DFITERGALQEEL 116
Query: 433 RLVIAHQIAEGLTYLHSAAVPPIYHRDVKSSNILLD-EKLNAKVSDFGLSRLVERTETND 491
Q+ E + + H+ V HRD+K NIL+D + K+ DFG L++ T
Sbjct: 117 ARSFFWQVLEAVRHCHNCGV---LHRDIKDENILIDLNRGELKLIDFGSGALLKDT---- 169
Query: 492 SHIFTTAQGTMGYLDPEYYRNFQLTDKS-DVYSFGVVLLELLTSKKAIDFNREEENVNLV 550
++T GT Y PE+ R + +S V+S G++L +++ I F +EE +
Sbjct: 170 --VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGD--IPFEHDEEIIRGQ 225
Query: 551 VYMKKIMDEE 560
V+ ++ + E
Sbjct: 226 VFFRQRVSSE 235
>pdb|1YWV|A Chain A, Crystal Structures Of Proto-Oncogene Kinase Pim1: A Target
Of Aberrant Somatic Hypermutations In Diffuse Large Cell
Lymphoma
pdb|1YXT|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amppnp
pdb|1YXU|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|B Chain B, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|C Chain C, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|D Chain D, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXV|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
3,4-Dihydroxy-1- Methylquinolin-2(1h)-One
pdb|1YXX|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
(3e)-3-[(4- Hydroxyphenyl)imino]-1h-Indol-2(3h)-One
pdb|2O3P|A Chain A, Crystal Structure Of Pim1 With Quercetin
pdb|2O63|A Chain A, Crystal Structure Of Pim1 With Myricetin
pdb|2O64|A Chain A, Crystal Structure Of Pim1 With Quercetagetin
pdb|2O65|A Chain A, Crystal Structure Of Pim1 With Pentahydroxyflavone
Length = 293
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 70/250 (28%), Positives = 112/250 (44%), Gaps = 28/250 (11%)
Query: 323 KEIRRATNNFSKDNLIGTGGFGEVFKGI-LDDGTVTAIKRAK------LGNTKGTDLVLN 375
KE + + L+G+GGFG V+ GI + D AIK + G V
Sbjct: 1 KEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPM 60
Query: 376 EVRILCQVN--HRSLVRLLGCCVELDQTLMIYEYI-PNGTLFDHLHCDFTGKWPPLPWHL 432
EV +L +V+ ++RLL D ++I E P LF DF + L L
Sbjct: 61 EVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLF-----DFITERGALQEEL 115
Query: 433 RLVIAHQIAEGLTYLHSAAVPPIYHRDVKSSNILLD-EKLNAKVSDFGLSRLVERTETND 491
Q+ E + + H+ V HRD+K NIL+D + K+ DFG L++ T
Sbjct: 116 ARSFFWQVLEAVRHCHNCGV---LHRDIKDENILIDLNRGELKLIDFGSGALLKDT---- 168
Query: 492 SHIFTTAQGTMGYLDPEYYRNFQLTDKS-DVYSFGVVLLELLTSKKAIDFNREEENVNLV 550
++T GT Y PE+ R + +S V+S G++L +++ I F +EE +
Sbjct: 169 --VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGD--IPFEHDEEIIRGQ 224
Query: 551 VYMKKIMDEE 560
V+ ++ + E
Sbjct: 225 VFFRQRVSSE 234
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 64/220 (29%), Positives = 107/220 (48%), Gaps = 35/220 (15%)
Query: 330 NNFSKDNLIGTGGFGEVFKGILD-DGTVTAIKRAKLGN-TKGT-DLVLNEVRILCQVNHR 386
NF K IG G +G V+K G V A+K+ +L T+G + E+ +L ++NH
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 387 SLVRLLGCCVELDQTLMIYEYIPNG--TLFDHLHCDFTGKWPPLPWHLRLVIAHQIAEGL 444
++V+LL ++ +++E++ T D TG PLP L Q+ +GL
Sbjct: 62 NIVKLLDVIHTENKLYLVFEHVHQDLKTFMDA--SALTGI--PLP--LIKSYLFQLLQGL 115
Query: 445 TYLHSAAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSR---LVERTETNDSHIFTTAQGT 501
+ HS V HRD+K N+L++ + K++DFGL+R + RT T++ T
Sbjct: 116 AFCHSHRV---LHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEV-------VT 165
Query: 502 MGYLDPE------YYRNFQLTDKSDVYSFGVVLLELLTSK 535
+ Y PE YY + D++S G + E++T +
Sbjct: 166 LWYRAPEILLGCKYY-----STAVDIWSLGCIFAEMVTRR 200
>pdb|3Q4T|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3Q4T|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3SOC|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|3SOC|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|4ASX|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
pdb|4ASX|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
Length = 322
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 57/182 (31%), Positives = 86/182 (47%), Gaps = 28/182 (15%)
Query: 376 EVRILCQVNHRSLVRLLGC-----CVELDQTLMIYEYIPNGTLFDHLHCDFTGKWPPLPW 430
EV L + H ++++ +G V++D +I + G+L D L + + W
Sbjct: 68 EVYSLPGMKHENILQFIGAEKRGTSVDVD-LWLITAFHEKGSLSDFLKANV------VSW 120
Query: 431 HLRLVIAHQIAEGLTYLHS-------AAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRL 483
+ IA +A GL YLH P I HRD+KS N+LL L A ++DFGL+
Sbjct: 121 NELCHIAETMARGLAYLHEDIPGLKDGHKPAISHRDIKSKNVLLKNNLTACIADFGLALK 180
Query: 484 VERTET-NDSHIFTTAQGTMGYLDPEYYR---NFQLTD--KSDVYSFGVVLLELLTSKKA 537
E ++ D+H GT Y+ PE NFQ + D+Y+ G+VL EL + A
Sbjct: 181 FEAGKSAGDTH---GQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELASRCTA 237
Query: 538 ID 539
D
Sbjct: 238 AD 239
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 62/218 (28%), Positives = 105/218 (48%), Gaps = 27/218 (12%)
Query: 328 ATNNFSKDNLIGTGGFGEVFKGILD-DGTVTAIKRAKLGN-TKGT-DLVLNEVRILCQVN 384
+ NF K IG G +G V+K G V A+K+ +L T+G + E+ +L ++N
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 63
Query: 385 HRSLVRLLGCCVELDQTLMIYEYIPNGTLFDHLHCD-FTGKWPPLPWHLRLVIAHQIAEG 443
H ++V+LL ++ +++E++ + L D + TG PLP L Q+ +G
Sbjct: 64 HPNIVKLLDVIHTENKLYLVFEFL-SMDLKDFMDASALTGI--PLP--LIKSYLFQLLQG 118
Query: 444 LTYLHSAAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDSHIFTTAQGTMG 503
L + HS V HRD+K N+L++ + K++DFGL+R H T+
Sbjct: 119 LAFCHSHRV---LHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV----TLW 171
Query: 504 YLDPE------YYRNFQLTDKSDVYSFGVVLLELLTSK 535
Y PE YY + D++S G + E++T +
Sbjct: 172 YRAPEILLGCKYY-----STAVDIWSLGCIFAEMVTRR 204
>pdb|4A7C|A Chain A, Crystal Structure Of Pim1 Kinase With Etp46546
Length = 308
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 72/257 (28%), Positives = 115/257 (44%), Gaps = 31/257 (12%)
Query: 319 IFTG---KEIRRATNNFSKDNLIGTGGFGEVFKGI-LDDGTVTAIKRAK------LGNTK 368
+F G KE + + L+G+GGFG V+ GI + D AIK + G
Sbjct: 17 LFQGPHMKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELP 76
Query: 369 GTDLVLNEVRILCQVN--HRSLVRLLGCCVELDQTLMIYEYI-PNGTLFDHLHCDFTGKW 425
V EV +L +V+ ++RLL D ++I E P LF DF +
Sbjct: 77 NGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLF-----DFITER 131
Query: 426 PPLPWHLRLVIAHQIAEGLTYLHSAAVPPIYHRDVKSSNILLD-EKLNAKVSDFGLSRLV 484
L L Q+ E + + H+ V HRD+K NIL+D + K+ DFG L+
Sbjct: 132 GALQEELARSFFWQVLEAVRHCHNCGV---LHRDIKDENILIDLNRGELKLIDFGSGALL 188
Query: 485 ERTETNDSHIFTTAQGTMGYLDPEYYRNFQLTDKS-DVYSFGVVLLELLTSKKAIDFNRE 543
+ T ++T GT Y PE+ R + +S V+S G++L +++ I F +
Sbjct: 189 KDT------VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGD--IPFEHD 240
Query: 544 EENVNLVVYMKKIMDEE 560
EE + V+ ++ + E
Sbjct: 241 EEIIRGQVFFRQRVSXE 257
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 98/212 (46%), Gaps = 21/212 (9%)
Query: 329 TNNFSKDNLIGTGGFGEVF----KGILDDGTVTAIKRAKLGNTKGTDLVLNEVRILCQVN 384
++ + ++G G FGEV K + V I + ++ + +L EV++L Q++
Sbjct: 25 SDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLD 84
Query: 385 HRSLVRLLGCCVELDQTLMIYEYIPNGTLFDHLHCDFTGKWPPLPWHLRLVIAHQIAEGL 444
H ++ +L + ++ E G LFD + + K R++ Q+ G+
Sbjct: 85 HPNIXKLYEFFEDKGYFYLVGEVYTGGELFDEI---ISRKRFSEVDAARII--RQVLSGI 139
Query: 445 TYLHSAAVPPIYHRDVKSSNILLDEK---LNAKVSDFGLSRLVERTETNDSHIFTTAQGT 501
TY H I HRD+K N+LL+ K N ++ DFGLS E ++ I GT
Sbjct: 140 TYXHK---NKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKXKDKI-----GT 191
Query: 502 MGYLDPEYYRNFQLTDKSDVYSFGVVLLELLT 533
Y+ PE +K DV+S GV+L LL+
Sbjct: 192 AYYIAPEVLHG-TYDEKCDVWSTGVILYILLS 222
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 104/213 (48%), Gaps = 21/213 (9%)
Query: 330 NNFSKDNLIGTGGFGEVFKGILD-DGTVTAIKRAKLGN-TKGT-DLVLNEVRILCQVNHR 386
NF K IG G +G V+K G V A+K+ +L T+G + E+ +L ++NH
Sbjct: 10 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 69
Query: 387 SLVRLLGCCVELDQTLMIYEYIPNGTLFDHLHCDFTGKWPPLPWHLRLVIAHQIAEGLTY 446
++V+LL ++ +++E++ TG PLP L Q+ +GL +
Sbjct: 70 NIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGI--PLP--LIKSYLFQLLQGLAF 125
Query: 447 LHSAAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSR---LVERTETNDSHIFTTAQGTMG 503
HS V HRD+K N+L++ + K++DFGL+R + RT T++ T+
Sbjct: 126 CHSHRV---LHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEV-------VTLW 175
Query: 504 YLDPEYYRNFQLTDKS-DVYSFGVVLLELLTSK 535
Y PE + + D++S G + E++T +
Sbjct: 176 YRAPEILLGXKYYSTAVDIWSLGCIFAEMVTRR 208
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 48/134 (35%), Positives = 68/134 (50%), Gaps = 11/134 (8%)
Query: 403 MIYEYIPNGTLFDHLHCDFTGKWPPLPWHLRLVIAHQIAEGLTYLHSAAVPPIYHRDVKS 462
++ EY+ TL D +H + P P VIA + L + H I HRDVK
Sbjct: 93 IVMEYVDGVTLRDIVHTE----GPMTPKRAIEVIA-DACQALNFSHQNG---IIHRDVKP 144
Query: 463 SNILLDEKLNAKVSDFGLSRLVERTETNDSHIFTTAQ-GTMGYLDPEYYRNFQLTDKSDV 521
+NI++ KV DFG++R + ++ +S T A GT YL PE R + +SDV
Sbjct: 145 ANIMISATNAVKVMDFGIARAI--ADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDV 202
Query: 522 YSFGVVLLELLTSK 535
YS G VL E+LT +
Sbjct: 203 YSLGCVLYEVLTGE 216
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 62/218 (28%), Positives = 105/218 (48%), Gaps = 27/218 (12%)
Query: 328 ATNNFSKDNLIGTGGFGEVFKGILD-DGTVTAIKRAKLGN-TKGT-DLVLNEVRILCQVN 384
+ NF K IG G +G V+K G V A+K+ +L T+G + E+ +L ++N
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 62
Query: 385 HRSLVRLLGCCVELDQTLMIYEYIPNGTLFDHLHCD-FTGKWPPLPWHLRLVIAHQIAEG 443
H ++V+LL ++ +++E++ + L D + TG PLP L Q+ +G
Sbjct: 63 HPNIVKLLDVIHTENKLYLVFEFL-SMDLKDFMDASALTGI--PLP--LIKSYLFQLLQG 117
Query: 444 LTYLHSAAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDSHIFTTAQGTMG 503
L + HS V HRD+K N+L++ + K++DFGL+R H T+
Sbjct: 118 LAFCHSHRV---LHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV----TLW 170
Query: 504 YLDPE------YYRNFQLTDKSDVYSFGVVLLELLTSK 535
Y PE YY + D++S G + E++T +
Sbjct: 171 YRAPEILLGCKYY-----STAVDIWSLGCIFAEMVTRR 203
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 91/208 (43%), Gaps = 16/208 (7%)
Query: 330 NNFSKDNLIGTGGFGEVFK-GILDDGTVTAIKRAKLGNTKGT--DLVLNEVRILCQVNHR 386
+ K IG G +G VFK D G + AIK+ + L E+R+L Q+ H
Sbjct: 3 EKYEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHP 62
Query: 387 SLVRLLGCCVELDQTLMIYEYIPNGTLFDHLHCDFTGKWPPLPWHLRLVIAHQIAEGLTY 446
+LV LL + +++EY + T+ L G +P HL I Q + + +
Sbjct: 63 NLVNLLEVFRRKRRLHLVFEYC-DHTVLHELDRYQRG----VPEHLVKSITWQTLQAVNF 117
Query: 447 LHSAAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDSHIFTTAQGTMGYLD 506
H HRDVK NIL+ + K+ DFG +RL+ T S + T Y
Sbjct: 118 CHKHNC---IHRDVKPENILITKHSVIKLCDFGFARLL----TGPSDYYDDEVATRWYRS 170
Query: 507 PEYYR-NFQLTDKSDVYSFGVVLLELLT 533
PE + Q DV++ G V ELL+
Sbjct: 171 PELLVGDTQYGPPVDVWAIGCVFAELLS 198
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 50/160 (31%), Positives = 78/160 (48%), Gaps = 12/160 (7%)
Query: 330 NNFSKDNLIGTGGFGEVF----KGILDDGTVTAIKRAKLGNTKGTDLVLNEVRILCQVNH 385
+ F + +GTG FG V K + + + + K+ K + LNE RIL VN
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 386 RSLVRLLGCCVELDQTLMIYEYIPNGTLFDHLHCDFTGKWPPLPWHLRLVIAHQIAEGLT 445
LV+L + M+ EY+ G +F HL G++ P H R A QI
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRR--IGRFSE-P-HARFYAA-QIVLTFE 155
Query: 446 YLHSAAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVE 485
YLHS + +RD+K N+L+D++ +V+DFG ++ V+
Sbjct: 156 YLHSL---DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK 192
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 62/218 (28%), Positives = 106/218 (48%), Gaps = 31/218 (14%)
Query: 330 NNFSKDNLIGTGGFGEVFKGILD-DGTVTAIKRAKLGN-TKGT-DLVLNEVRILCQVNHR 386
NF K IG G +G V+K G V A+K+ +L T+G + E+ +L ++NH
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 387 SLVRLLGCCVELDQTLMIYEYIPNGTLFDHLHCDFTGKWPPLPWHLRLVIAHQIAEGLTY 446
++V+LL ++ +++E++ TG PLP L Q+ +GL++
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGI--PLP--LIKSYLFQLLQGLSF 118
Query: 447 LHSAAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSR---LVERTETNDSHIFTTAQGTMG 503
HS V HRD+K N+L++ + K++DFGL+R + RT T++ T+
Sbjct: 119 CHSHRV---LHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEV-------VTLW 168
Query: 504 YLDPE------YYRNFQLTDKSDVYSFGVVLLELLTSK 535
Y PE YY + D++S G + E++T +
Sbjct: 169 YRAPEILLGCKYY-----STAVDIWSLGCIFAEMVTRR 201
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 104/213 (48%), Gaps = 21/213 (9%)
Query: 330 NNFSKDNLIGTGGFGEVFKGILD-DGTVTAIKRAKLGN-TKGT-DLVLNEVRILCQVNHR 386
NF K IG G +G V+K G V A+K+ +L T+G + E+ +L ++NH
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 387 SLVRLLGCCVELDQTLMIYEYIPNGTLFDHLHCDFTGKWPPLPWHLRLVIAHQIAEGLTY 446
++V+LL ++ +++E++ TG PLP L Q+ +GL +
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGI--PLP--LIKSYLFQLLQGLAF 118
Query: 447 LHSAAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSR---LVERTETNDSHIFTTAQGTMG 503
HS V HRD+K N+L++ + K++DFGL+R + RT T++ T+
Sbjct: 119 CHSHRV---LHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEV-------VTLW 168
Query: 504 YLDPEYYRNFQLTDKS-DVYSFGVVLLELLTSK 535
Y PE + + D++S G + E++T +
Sbjct: 169 YRAPEILLGXKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 48/134 (35%), Positives = 68/134 (50%), Gaps = 11/134 (8%)
Query: 403 MIYEYIPNGTLFDHLHCDFTGKWPPLPWHLRLVIAHQIAEGLTYLHSAAVPPIYHRDVKS 462
++ EY+ TL D +H + P P VIA + L + H I HRDVK
Sbjct: 93 IVMEYVDGVTLRDIVHTE----GPMTPKRAIEVIA-DACQALNFSHQNG---IIHRDVKP 144
Query: 463 SNILLDEKLNAKVSDFGLSRLVERTETNDSHIFTTAQ-GTMGYLDPEYYRNFQLTDKSDV 521
+NI++ KV DFG++R + ++ +S T A GT YL PE R + +SDV
Sbjct: 145 ANIMISATNAVKVMDFGIARAI--ADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDV 202
Query: 522 YSFGVVLLELLTSK 535
YS G VL E+LT +
Sbjct: 203 YSLGCVLYEVLTGE 216
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 88/211 (41%), Gaps = 24/211 (11%)
Query: 330 NNFSKDNLIGTGGFGEVF-------KGILDDGTVTAIKRAKLGNTKGTDLVLNEVRILCQ 382
+F +G G FG V+ K IL + + + +L + EV I
Sbjct: 12 EDFDIGRPLGKGKFGNVYLARERQSKFIL---ALKVLFKTQLEKAGVEHQLRREVEIQSH 68
Query: 383 VNHRSLVRLLGCCVELDQTLMIYEYIPNGTLFDHLHCDFTGKWPPLPWHLRLVIAHQIAE 442
+ H +++RL G + + +I EY P GT++ L K ++A
Sbjct: 69 LRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQ-----KLSRFDEQRTATYITELAN 123
Query: 443 GLTYLHSAAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDSHIFTTAQGTM 502
L+Y HS V HRD+K N+LL K++DFG S + TT GT+
Sbjct: 124 ALSYCHSKRV---IHRDIKPENLLLGSNGELKIADFGWSVHAPSSRR------TTLCGTL 174
Query: 503 GYLDPEYYRNFQLTDKSDVYSFGVVLLELLT 533
YL PE +K D++S GV+ E L
Sbjct: 175 DYLPPEMIEGRMHDEKVDLWSLGVLCYEFLV 205
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 59/229 (25%), Positives = 100/229 (43%), Gaps = 21/229 (9%)
Query: 324 EIRRATNNFSKDNLIGTGGFGEVF----KGILDDGTVTAIKRAKLGNTKGTDLVLNEVRI 379
+I+ +F ++G G FG+VF K + A+K+ + + + E R+
Sbjct: 11 QIKLKIEDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRV 70
Query: 380 LCQVNHRSLVRLLGCCVELDQTLM-IYEYIPNGTLFDHLHCDFTGKWPPLPWHLRLVIAH 438
L + + C + + L + EY+ G L H+ ++ A
Sbjct: 71 LSLAWEHPFLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQSCHKFDLSRATFY-----AA 125
Query: 439 QIAEGLTYLHSAAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSR--LVERTETNDSHIFT 496
+I GL +LHS I +RD+K NILLD+ + K++DFG+ + ++ +TN
Sbjct: 126 EIILGLQFLHSKG---IVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAKTN------ 176
Query: 497 TAQGTMGYLDPEYYRNFQLTDKSDVYSFGVVLLELLTSKKAIDFNREEE 545
GT Y+ PE + D +SFGV+L E+L + EEE
Sbjct: 177 XFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEE 225
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 66/223 (29%), Positives = 103/223 (46%), Gaps = 36/223 (16%)
Query: 338 IGTGGFGEVFKGI-LDDGTVTAIKRA--KLGNTKGTDLVLNEVRILCQVN-HRSLVRLLG 393
+G G +G V+K I G V A+K+ N+ E+ IL +++ H ++V LL
Sbjct: 17 LGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHENIVNLLN 76
Query: 394 CCVELDQTLMIYEYIPNGTLFDHLHCDFTGKWPP---LPWHLRLVIAHQIAEGLTYLHSA 450
+ D +Y +FD++ D P H + V+ +Q+ + + YLHS
Sbjct: 77 V-LRADNDRDVY------LVFDYMETDLHAVIRANILEPVHKQYVV-YQLIKVIKYLHSG 128
Query: 451 AVPPIYHRDVKSSNILLDEKLNAKVSDFGLSR---------------LVERTET--NDSH 493
+ HRD+K SNILL+ + + KV+DFGLSR + E TE +D
Sbjct: 129 G---LLHRDMKPSNILLNAECHVKVADFGLSRSFVNIRRVTNNIPLSINENTENFDDDQP 185
Query: 494 IFTTAQGTMGYLDPEYYR-NFQLTDKSDVYSFGVVLLELLTSK 535
I T T Y PE + + T D++S G +L E+L K
Sbjct: 186 ILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGK 228
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 106/220 (48%), Gaps = 31/220 (14%)
Query: 328 ATNNFSKDNLIGTGGFGEVFKGILD-DGTVTAIKRAKLGN-TKGT-DLVLNEVRILCQVN 384
+ NF K IG G +G V+K G V A+K+ +L T+G + E+ +L ++N
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 61
Query: 385 HRSLVRLLGCCVELDQTLMIYEYIPNGTLFDHLHCDFTGKWPPLPWHLRLVIAHQIAEGL 444
H ++V+LL ++ +++E++ TG PLP L Q+ +GL
Sbjct: 62 HPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGI--PLP--LIKSYLFQLLQGL 117
Query: 445 TYLHSAAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSR---LVERTETNDSHIFTTAQGT 501
+ HS V HRD+K N+L++ + K++DFGL+R + RT T++ T
Sbjct: 118 AFCHSHRV---LHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEV-------VT 167
Query: 502 MGYLDPE------YYRNFQLTDKSDVYSFGVVLLELLTSK 535
+ Y PE YY + D++S G + E++T +
Sbjct: 168 LWYRAPEILLGCKYY-----STAVDIWSLGCIFAEMVTRR 202
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 99/203 (48%), Gaps = 23/203 (11%)
Query: 338 IGTGGFGEVFKGILDDGTVTAIKRAKLGNTKGTDLV---LNEVRILCQVNHRSLVRLLGC 394
+G G FG+V+K + +V A AK+ +TK + + + E+ IL +H ++V+LL
Sbjct: 45 LGDGAFGKVYKAQNKETSVLA--AAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDA 102
Query: 395 CVELDQTLMIYEYIPNGTLFDHLHCDFTGKWPPLPWHLRLVIAHQIAEGLTYLHSAAVPP 454
+ ++ E+ G + D + + PL V+ Q + L YLH
Sbjct: 103 FYYENNLWILIEFCAGGAV-DAVMLELER---PLTESQIQVVCKQTLDALNYLHDNK--- 155
Query: 455 IYHRDVKSSNILLDEKLNAKVSDFGLSRLVERT-ETNDSHIFTTAQGTMGYLDPEYY--- 510
I HRD+K+ NIL + K++DFG+S RT + DS I GT ++ PE
Sbjct: 156 IIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTIQRRDSFI-----GTPYWMAPEVVMCE 210
Query: 511 --RNFQLTDKSDVYSFGVVLLEL 531
++ K+DV+S G+ L+E+
Sbjct: 211 TSKDRPYDYKADVWSLGITLIEM 233
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 62/218 (28%), Positives = 105/218 (48%), Gaps = 31/218 (14%)
Query: 330 NNFSKDNLIGTGGFGEVFKGILD-DGTVTAIKRAKLGN-TKGT-DLVLNEVRILCQVNHR 386
NF K IG G +G V+K G V A+K+ +L T+G + E+ +L ++NH
Sbjct: 10 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 69
Query: 387 SLVRLLGCCVELDQTLMIYEYIPNGTLFDHLHCDFTGKWPPLPWHLRLVIAHQIAEGLTY 446
++V+LL ++ +++E++ TG PLP L Q+ +GL +
Sbjct: 70 NIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGI--PLP--LIKSYLFQLLQGLAF 125
Query: 447 LHSAAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSR---LVERTETNDSHIFTTAQGTMG 503
HS V HRD+K N+L++ + K++DFGL+R + RT T++ T+
Sbjct: 126 CHSHRV---LHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEV-------VTLW 175
Query: 504 YLDPE------YYRNFQLTDKSDVYSFGVVLLELLTSK 535
Y PE YY + D++S G + E++T +
Sbjct: 176 YRAPEILLGCKYY-----STAVDIWSLGCIFAEMVTRR 208
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 103/219 (47%), Gaps = 29/219 (13%)
Query: 328 ATNNFSKDNLIGTGGFGEVFKGILD-DGTVTAIKRAKLGN-TKGT-DLVLNEVRILCQVN 384
+ NF K IG G +G V+K G V A+K+ +L T+G + E+ +L ++N
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 63
Query: 385 HRSLVRLLGCCVELDQTLMIYEYIPNG--TLFDHLHCDFTGKWPPLPWHLRLVIAHQIAE 442
H ++V+LL ++ +++E++ T D TG PLP L Q+ +
Sbjct: 64 HPNIVKLLDVIHTENKLYLVFEFLHQDLKTFMDA--SALTGI--PLP--LIKSYLFQLLQ 117
Query: 443 GLTYLHSAAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDSHIFTTAQGTM 502
GL + HS V HRD+K N+L++ + K++DFGL+R H T+
Sbjct: 118 GLAFCHSHRV---LHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV----TL 170
Query: 503 GYLDPE------YYRNFQLTDKSDVYSFGVVLLELLTSK 535
Y PE YY + D++S G + E++T +
Sbjct: 171 WYRAPEILLGCKYY-----STAVDIWSLGCIFAEMVTRR 204
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 62/218 (28%), Positives = 105/218 (48%), Gaps = 31/218 (14%)
Query: 330 NNFSKDNLIGTGGFGEVFKGILD-DGTVTAIKRAKLGN-TKGT-DLVLNEVRILCQVNHR 386
NF K IG G +G V+K G V A+K+ +L T+G + E+ +L ++NH
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 387 SLVRLLGCCVELDQTLMIYEYIPNGTLFDHLHCDFTGKWPPLPWHLRLVIAHQIAEGLTY 446
++V+LL ++ +++E++ TG PLP L Q+ +GL +
Sbjct: 62 NIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGI--PLP--LIKSYLFQLLQGLAF 117
Query: 447 LHSAAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSR---LVERTETNDSHIFTTAQGTMG 503
HS V HRD+K N+L++ + K++DFGL+R + RT T++ T+
Sbjct: 118 CHSHRV---LHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEV-------VTLW 167
Query: 504 YLDPE------YYRNFQLTDKSDVYSFGVVLLELLTSK 535
Y PE YY + D++S G + E++T +
Sbjct: 168 YRAPEILLGCKYY-----STAVDIWSLGCIFAEMVTRR 200
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 62/218 (28%), Positives = 105/218 (48%), Gaps = 31/218 (14%)
Query: 330 NNFSKDNLIGTGGFGEVFKGILD-DGTVTAIKRAKLGN-TKGT-DLVLNEVRILCQVNHR 386
NF K IG G +G V+K G V A+K+ +L T+G + E+ +L ++NH
Sbjct: 7 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 66
Query: 387 SLVRLLGCCVELDQTLMIYEYIPNGTLFDHLHCDFTGKWPPLPWHLRLVIAHQIAEGLTY 446
++V+LL ++ +++E++ TG PLP L Q+ +GL +
Sbjct: 67 NIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGI--PLP--LIKSYLFQLLQGLAF 122
Query: 447 LHSAAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSR---LVERTETNDSHIFTTAQGTMG 503
HS V HRD+K N+L++ + K++DFGL+R + RT T++ T+
Sbjct: 123 CHSHRV---LHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEV-------VTLW 172
Query: 504 YLDPE------YYRNFQLTDKSDVYSFGVVLLELLTSK 535
Y PE YY + D++S G + E++T +
Sbjct: 173 YRAPEILLGCKYY-----STAVDIWSLGCIFAEMVTRR 205
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 62/217 (28%), Positives = 104/217 (47%), Gaps = 35/217 (16%)
Query: 331 NFSKDNLIGTGGFGEVFKGIL-DDGTVTAIKRAKLGNTKGTDLVLNEVRILCQVNHRSLV 389
+++ +IG G FG V++ L D G + AIK+ +G E++I+ +++H ++V
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV----LQGKAFKNRELQIMRKLDHCNIV 76
Query: 390 RL----LGCCVELDQTLM--IYEYIPNGTLFDHLHCDFTGKWPPLPWHLRLVIAHQIAEG 443
RL + D+ + + +Y+P H + P+ +++L + +Q+
Sbjct: 77 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPV-IYVKLYM-YQLFRS 134
Query: 444 LTYLHSAAVPPIYHRDVKSSNILLDEKLNA-KVSDFGLSRLVERTETNDSHIFTTAQGTM 502
L Y+HS I HRD+K N+LLD K+ DFG ++ + R E N S+I +
Sbjct: 135 LAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICS------ 185
Query: 503 GYLDPEYYRNFQL-------TDKSDVYSFGVVLLELL 532
YYR +L T DV+S G VL ELL
Sbjct: 186 -----RYYRAPELIFGATDYTSSIDVWSAGCVLAELL 217
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/134 (35%), Positives = 68/134 (50%), Gaps = 11/134 (8%)
Query: 403 MIYEYIPNGTLFDHLHCDFTGKWPPLPWHLRLVIAHQIAEGLTYLHSAAVPPIYHRDVKS 462
++ EY+ TL D +H + P P VIA + L + H I HRDVK
Sbjct: 110 IVMEYVDGVTLRDIVHTE----GPMTPKRAIEVIA-DACQALNFSHQNG---IIHRDVKP 161
Query: 463 SNILLDEKLNAKVSDFGLSRLVERTETNDSHIFTTAQ-GTMGYLDPEYYRNFQLTDKSDV 521
+NI++ KV DFG++R + ++ +S T A GT YL PE R + +SDV
Sbjct: 162 ANIMISATNAVKVMDFGIARAI--ADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDV 219
Query: 522 YSFGVVLLELLTSK 535
YS G VL E+LT +
Sbjct: 220 YSLGCVLYEVLTGE 233
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 62/218 (28%), Positives = 105/218 (48%), Gaps = 31/218 (14%)
Query: 330 NNFSKDNLIGTGGFGEVFKGILD-DGTVTAIKRAKLGN-TKGT-DLVLNEVRILCQVNHR 386
NF K IG G +G V+K G V A+K+ +L T+G + E+ +L ++NH
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 387 SLVRLLGCCVELDQTLMIYEYIPNGTLFDHLHCDFTGKWPPLPWHLRLVIAHQIAEGLTY 446
++V+LL ++ +++E++ TG PLP L Q+ +GL +
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGI--PLP--LIKSYLFQLLQGLAF 118
Query: 447 LHSAAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSR---LVERTETNDSHIFTTAQGTMG 503
HS V HRD+K N+L++ + K++DFGL+R + RT T++ T+
Sbjct: 119 CHSHRV---LHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEV-------VTLW 168
Query: 504 YLDPE------YYRNFQLTDKSDVYSFGVVLLELLTSK 535
Y PE YY + D++S G + E++T +
Sbjct: 169 YRAPEILLGCKYY-----STAVDIWSLGCIFAEMVTRR 201
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 62/217 (28%), Positives = 104/217 (47%), Gaps = 35/217 (16%)
Query: 331 NFSKDNLIGTGGFGEVFKGIL-DDGTVTAIKRAKLGNTKGTDLVLNEVRILCQVNHRSLV 389
+++ +IG G FG V++ L D G + AIK+ +G E++I+ +++H ++V
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV----LQGKAFKNRELQIMRKLDHCNIV 76
Query: 390 RL----LGCCVELDQTLM--IYEYIPNGTLFDHLHCDFTGKWPPLPWHLRLVIAHQIAEG 443
RL + D+ + + +Y+P H + P+ +++L + +Q+
Sbjct: 77 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPV-IYVKLYM-YQLFRS 134
Query: 444 LTYLHSAAVPPIYHRDVKSSNILLDEKLNA-KVSDFGLSRLVERTETNDSHIFTTAQGTM 502
L Y+HS I HRD+K N+LLD K+ DFG ++ + R E N S+I +
Sbjct: 135 LAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICS------ 185
Query: 503 GYLDPEYYRNFQL-------TDKSDVYSFGVVLLELL 532
YYR +L T DV+S G VL ELL
Sbjct: 186 -----RYYRAPELIFGATDYTSSIDVWSAGCVLAELL 217
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 62/218 (28%), Positives = 105/218 (48%), Gaps = 31/218 (14%)
Query: 330 NNFSKDNLIGTGGFGEVFKGILD-DGTVTAIKRAKLGN-TKGT-DLVLNEVRILCQVNHR 386
NF K IG G +G V+K G V A+K+ +L T+G + E+ +L ++NH
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 387 SLVRLLGCCVELDQTLMIYEYIPNGTLFDHLHCDFTGKWPPLPWHLRLVIAHQIAEGLTY 446
++V+LL ++ +++E++ TG PLP L Q+ +GL +
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGI--PLP--LIKSYLFQLLQGLAF 118
Query: 447 LHSAAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSR---LVERTETNDSHIFTTAQGTMG 503
HS V HRD+K N+L++ + K++DFGL+R + RT T++ T+
Sbjct: 119 CHSHRV---LHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEV-------VTLW 168
Query: 504 YLDPE------YYRNFQLTDKSDVYSFGVVLLELLTSK 535
Y PE YY + D++S G + E++T +
Sbjct: 169 YRAPEILLGCKYY-----STAVDIWSLGCIFAEMVTRR 201
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 62/218 (28%), Positives = 105/218 (48%), Gaps = 31/218 (14%)
Query: 330 NNFSKDNLIGTGGFGEVFKGILD-DGTVTAIKRAKLGN-TKGT-DLVLNEVRILCQVNHR 386
NF K IG G +G V+K G V A+K+ +L T+G + E+ +L ++NH
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 387 SLVRLLGCCVELDQTLMIYEYIPNGTLFDHLHCDFTGKWPPLPWHLRLVIAHQIAEGLTY 446
++V+LL ++ +++E++ TG PLP L Q+ +GL +
Sbjct: 62 NIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGI--PLP--LIKSYLFQLLQGLAF 117
Query: 447 LHSAAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSR---LVERTETNDSHIFTTAQGTMG 503
HS V HRD+K N+L++ + K++DFGL+R + RT T++ T+
Sbjct: 118 CHSHRV---LHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEV-------VTLW 167
Query: 504 YLDPE------YYRNFQLTDKSDVYSFGVVLLELLTSK 535
Y PE YY + D++S G + E++T +
Sbjct: 168 YRAPEILLGCKYY-----STAVDIWSLGCIFAEMVTRR 200
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 97/218 (44%), Gaps = 29/218 (13%)
Query: 327 RATNNFSKDNLIGTGGFGEVFKGILDDGTVTAIKRAKLGNTKGTDL-----VLNEVRILC 381
+ ++N+ +G G F V + + T AK+ NTK + E RI
Sbjct: 2 KFSDNYDVKEELGKGAFSVVRRCV--HKTTGLEFAAKIINTKKLSARDFQKLEREARICR 59
Query: 382 QVNHRSLVRLLGCCVELDQTLMIYEYIPNGTLFDHLHCDFTGKWPPLPWHLRLVIAH--- 438
++ H ++VRL E ++++ + G LF+ D + ++ +H
Sbjct: 60 KLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFE----DIVAR----EFYSEADASHCIQ 111
Query: 439 QIAEGLTYLHSAAVPPIYHRDVKSSNILLDEKLNA---KVSDFGLSRLVERTETNDSHIF 495
QI E + Y HS I HR++K N+LL K K++DFGL+ E NDS +
Sbjct: 112 QILESIAYCHSNG---IVHRNLKPENLLLASKAKGAAVKLADFGLA-----IEVNDSEAW 163
Query: 496 TTAQGTMGYLDPEYYRNFQLTDKSDVYSFGVVLLELLT 533
GT GYL PE + + D+++ GV+L LL
Sbjct: 164 HGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLV 201
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 98/211 (46%), Gaps = 15/211 (7%)
Query: 330 NNFSKDNLIGTGGFGEVFK-GILDDGTVTAIKRAKLGNTKGT-DLVLNEVRILCQVNHRS 387
++F K + +G G G VFK G V A K L + ++ E+++L + N
Sbjct: 68 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPY 127
Query: 388 LVRLLGCCVELDQTLMIYEYIPNGTLFDHLHCDFTGKWPPLPWHLRLVIAHQIAEGLTYL 447
+V G + + E++ G+L L K +P + ++ + +GLTYL
Sbjct: 128 IVGFYGAFYSDGEISICMEHMDGGSLDQVLK-----KAGRIPEQILGKVSIAVIKGLTYL 182
Query: 448 HSAAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDSHIFTTAQGTMGYLDP 507
I HRDVK SNIL++ + K+ DFG+S + + N + GT Y+ P
Sbjct: 183 REKH--KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMAN------SFVGTRSYMSP 234
Query: 508 EYYRNFQLTDKSDVYSFGVVLLELLTSKKAI 538
E + + +SD++S G+ L+E+ + I
Sbjct: 235 ERLQGTHYSVQSDIWSMGLSLVEMAVGRYPI 265
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 97/218 (44%), Gaps = 29/218 (13%)
Query: 327 RATNNFSKDNLIGTGGFGEVFKGILDDGTVTAIKRAKLGNTKGTDL-----VLNEVRILC 381
+ ++N+ +G G F V + + T AK+ NTK + E RI
Sbjct: 3 KFSDNYDVKEELGKGAFSVVRRCV--HKTTGLEFAAKIINTKKLSARDFQKLEREARICR 60
Query: 382 QVNHRSLVRLLGCCVELDQTLMIYEYIPNGTLFDHLHCDFTGKWPPLPWHLRLVIAH--- 438
++ H ++VRL E ++++ + G LF+ D + ++ +H
Sbjct: 61 KLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFE----DIVAR----EFYSEADASHCIQ 112
Query: 439 QIAEGLTYLHSAAVPPIYHRDVKSSNILLDEKLNA---KVSDFGLSRLVERTETNDSHIF 495
QI E + Y HS I HR++K N+LL K K++DFGL+ E NDS +
Sbjct: 113 QILESIAYCHSNG---IVHRNLKPENLLLASKAKGAAVKLADFGLA-----IEVNDSEAW 164
Query: 496 TTAQGTMGYLDPEYYRNFQLTDKSDVYSFGVVLLELLT 533
GT GYL PE + + D+++ GV+L LL
Sbjct: 165 HGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLV 202
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 97/218 (44%), Gaps = 29/218 (13%)
Query: 327 RATNNFSKDNLIGTGGFGEVFKGILDDGTVTAIKRAKLGNTKGTDL-----VLNEVRILC 381
+ ++N+ +G G F V + + T AK+ NTK + E RI
Sbjct: 3 KFSDNYDVKEELGKGAFSVVRRCV--HKTTGLEFAAKIINTKKLSARDFQKLEREARICR 60
Query: 382 QVNHRSLVRLLGCCVELDQTLMIYEYIPNGTLFDHLHCDFTGKWPPLPWHLRLVIAH--- 438
++ H ++VRL E ++++ + G LF+ D + ++ +H
Sbjct: 61 KLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFE----DIVAR----EFYSEADASHCIQ 112
Query: 439 QIAEGLTYLHSAAVPPIYHRDVKSSNILLDEKLNA---KVSDFGLSRLVERTETNDSHIF 495
QI E + Y HS I HR++K N+LL K K++DFGL+ E NDS +
Sbjct: 113 QILESIAYCHSNG---IVHRNLKPENLLLASKAKGAAVKLADFGLA-----IEVNDSEAW 164
Query: 496 TTAQGTMGYLDPEYYRNFQLTDKSDVYSFGVVLLELLT 533
GT GYL PE + + D+++ GV+L LL
Sbjct: 165 HGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLV 202
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 101/217 (46%), Gaps = 25/217 (11%)
Query: 328 ATNNFSKDNLIGTGGFGEVFKGILD-DGTVTAIKRAKLGN-TKGT-DLVLNEVRILCQVN 384
+ NF K IG G +G V+K G V A+K+ +L T+G + E+ +L ++N
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 385 HRSLVRLLGCCVELDQTLMIYEYIPNGTLFDHLHCDFTGKWPPLPWHLRLVIAHQIAEGL 444
H ++V+LL ++ +++E++ TG PLP L Q+ +GL
Sbjct: 61 HPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGI--PLP--LIKSYLFQLLQGL 116
Query: 445 TYLHSAAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDSHIFTTAQGTMGY 504
+ HS V HRD+K N+L++ + K++DFGL+R H T+ Y
Sbjct: 117 AFCHSHRV---LHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV----TLWY 169
Query: 505 LDPE------YYRNFQLTDKSDVYSFGVVLLELLTSK 535
PE YY + D++S G + E++T +
Sbjct: 170 RAPEILLGCKYY-----STAVDIWSLGCIFAEMVTRR 201
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 101/217 (46%), Gaps = 25/217 (11%)
Query: 328 ATNNFSKDNLIGTGGFGEVFKGILD-DGTVTAIKRAKLGN-TKGT-DLVLNEVRILCQVN 384
+ NF K IG G +G V+K G V A+K+ +L T+G + E+ +L ++N
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 385 HRSLVRLLGCCVELDQTLMIYEYIPNGTLFDHLHCDFTGKWPPLPWHLRLVIAHQIAEGL 444
H ++V+LL ++ +++E++ TG PLP L Q+ +GL
Sbjct: 61 HPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGI--PLP--LIKSYLFQLLQGL 116
Query: 445 TYLHSAAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDSHIFTTAQGTMGY 504
+ HS V HRD+K N+L++ + K++DFGL+R H T+ Y
Sbjct: 117 AFCHSHRV---LHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV----TLWY 169
Query: 505 LDPE------YYRNFQLTDKSDVYSFGVVLLELLTSK 535
PE YY + D++S G + E++T +
Sbjct: 170 RAPEILLGCKYY-----STAVDIWSLGCIFAEMVTRR 201
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 101/217 (46%), Gaps = 25/217 (11%)
Query: 328 ATNNFSKDNLIGTGGFGEVFKGILD-DGTVTAIKRAKLGN-TKGT-DLVLNEVRILCQVN 384
+ NF K IG G +G V+K G V A+K+ +L T+G + E+ +L ++N
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 62
Query: 385 HRSLVRLLGCCVELDQTLMIYEYIPNGTLFDHLHCDFTGKWPPLPWHLRLVIAHQIAEGL 444
H ++V+LL ++ +++E++ TG PLP L Q+ +GL
Sbjct: 63 HPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGI--PLP--LIKSYLFQLLQGL 118
Query: 445 TYLHSAAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDSHIFTTAQGTMGY 504
+ HS V HRD+K N+L++ + K++DFGL+R H T+ Y
Sbjct: 119 AFCHSHRV---LHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV----TLWY 171
Query: 505 LDPE------YYRNFQLTDKSDVYSFGVVLLELLTSK 535
PE YY + D++S G + E++T +
Sbjct: 172 RAPEILLGCKYY-----STAVDIWSLGCIFAEMVTRR 203
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 101/217 (46%), Gaps = 25/217 (11%)
Query: 328 ATNNFSKDNLIGTGGFGEVFKGILD-DGTVTAIKRAKLGN-TKGT-DLVLNEVRILCQVN 384
+ NF K IG G +G V+K G V A+K+ +L T+G + E+ +L ++N
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 63
Query: 385 HRSLVRLLGCCVELDQTLMIYEYIPNGTLFDHLHCDFTGKWPPLPWHLRLVIAHQIAEGL 444
H ++V+LL ++ +++E++ TG PLP L Q+ +GL
Sbjct: 64 HPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGI--PLP--LIKSYLFQLLQGL 119
Query: 445 TYLHSAAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDSHIFTTAQGTMGY 504
+ HS V HRD+K N+L++ + K++DFGL+R H T+ Y
Sbjct: 120 AFCHSHRV---LHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV----TLWY 172
Query: 505 LDPE------YYRNFQLTDKSDVYSFGVVLLELLTSK 535
PE YY + D++S G + E++T +
Sbjct: 173 RAPEILLGCKYY-----STAVDIWSLGCIFAEMVTRR 204
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 101/217 (46%), Gaps = 25/217 (11%)
Query: 328 ATNNFSKDNLIGTGGFGEVFKGILD-DGTVTAIKRAKLGN-TKGT-DLVLNEVRILCQVN 384
+ NF K IG G +G V+K G V A+K+ +L T+G + E+ +L ++N
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 62
Query: 385 HRSLVRLLGCCVELDQTLMIYEYIPNGTLFDHLHCDFTGKWPPLPWHLRLVIAHQIAEGL 444
H ++V+LL ++ +++E++ TG PLP L Q+ +GL
Sbjct: 63 HPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGI--PLP--LIKSYLFQLLQGL 118
Query: 445 TYLHSAAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDSHIFTTAQGTMGY 504
+ HS V HRD+K N+L++ + K++DFGL+R H T+ Y
Sbjct: 119 AFCHSHRV---LHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV----TLWY 171
Query: 505 LDPE------YYRNFQLTDKSDVYSFGVVLLELLTSK 535
PE YY + D++S G + E++T +
Sbjct: 172 RAPEILLGCKYY-----STAVDIWSLGCIFAEMVTRR 203
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 101/217 (46%), Gaps = 25/217 (11%)
Query: 328 ATNNFSKDNLIGTGGFGEVFKGILD-DGTVTAIKRAKLGN-TKGT-DLVLNEVRILCQVN 384
+ NF K IG G +G V+K G V A+K+ +L T+G + E+ +L ++N
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 62
Query: 385 HRSLVRLLGCCVELDQTLMIYEYIPNGTLFDHLHCDFTGKWPPLPWHLRLVIAHQIAEGL 444
H ++V+LL ++ +++E++ TG PLP L Q+ +GL
Sbjct: 63 HPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGI--PLP--LIKSYLFQLLQGL 118
Query: 445 TYLHSAAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDSHIFTTAQGTMGY 504
+ HS V HRD+K N+L++ + K++DFGL+R H T+ Y
Sbjct: 119 AFCHSHRV---LHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVV----TLWY 171
Query: 505 LDPE------YYRNFQLTDKSDVYSFGVVLLELLTSK 535
PE YY + D++S G + E++T +
Sbjct: 172 RAPEILLGCKYY-----STAVDIWSLGCIFAEMVTRR 203
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 63/208 (30%), Positives = 94/208 (45%), Gaps = 17/208 (8%)
Query: 330 NNFSKDNLIGTGGFGEVF----KGILDDGTVTAIKRAKLGNTKGTDLVLNEVRILCQ-VN 384
++F +IG G FG+V K V +++ + K +++E +L + V
Sbjct: 38 SDFHFLKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVK 97
Query: 385 HRSLVRLLGCCVELDQTLMIYEYIPNGTLFDHLHCDFTGKWPPLPWHLRLVIAHQIAEGL 444
H LV L D+ + +YI G LF HL + P ++ A +IA L
Sbjct: 98 HPFLVGLHFSFQTADKLYFVLDYINGGELFYHLQRERCFLEPRARFY-----AAEIASAL 152
Query: 445 TYLHSAAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDSHIFTTAQGTMGY 504
YLHS I +RD+K NILLD + + ++DFGL + E E N + +T GT Y
Sbjct: 153 GYLHSLN---IVYRDLKPENILLDSQGHIVLTDFGLCK--ENIEHNSTT--STFCGTPEY 205
Query: 505 LDPEYYRNFQLTDKSDVYSFGVVLLELL 532
L PE D + G VL E+L
Sbjct: 206 LAPEVLHKQPYDRTVDWWCLGAVLYEML 233
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 96/216 (44%), Gaps = 29/216 (13%)
Query: 329 TNNFSKDNLIGTGGFGEVFKGILDDGTVTAIKRAKLGNTKGTDL-----VLNEVRILCQV 383
++N+ +G G F V + + T AK+ NTK + E RI ++
Sbjct: 28 SDNYDVKEELGKGAFSVVRRCV--HKTTGLEFAAKIINTKKLSARDFQKLEREARICRKL 85
Query: 384 NHRSLVRLLGCCVELDQTLMIYEYIPNGTLFDHLHCDFTGKWPPLPWHLRLVIAH---QI 440
H ++VRL E ++++ + G LF+ D + ++ +H QI
Sbjct: 86 QHPNIVRLHDSIQEESFHYLVFDLVTGGELFE----DIVAR----EFYSEADASHCIQQI 137
Query: 441 AEGLTYLHSAAVPPIYHRDVKSSNILLDEKLNA---KVSDFGLSRLVERTETNDSHIFTT 497
E + Y HS I HR++K N+LL K K++DFGL+ E NDS +
Sbjct: 138 LESIAYCHSNG---IVHRNLKPENLLLASKAKGAAVKLADFGLA-----IEVNDSEAWHG 189
Query: 498 AQGTMGYLDPEYYRNFQLTDKSDVYSFGVVLLELLT 533
GT GYL PE + + D+++ GV+L LL
Sbjct: 190 FAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLV 225
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 101/217 (46%), Gaps = 25/217 (11%)
Query: 328 ATNNFSKDNLIGTGGFGEVFKGILD-DGTVTAIKRAKLGN-TKGT-DLVLNEVRILCQVN 384
+ NF K IG G +G V+K G V A+K+ +L T+G + E+ +L ++N
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 63
Query: 385 HRSLVRLLGCCVELDQTLMIYEYIPNGTLFDHLHCDFTGKWPPLPWHLRLVIAHQIAEGL 444
H ++V+LL ++ +++E++ TG PLP L Q+ +GL
Sbjct: 64 HPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGI--PLP--LIKSYLFQLLQGL 119
Query: 445 TYLHSAAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDSHIFTTAQGTMGY 504
+ HS V HRD+K N+L++ + K++DFGL+R H T+ Y
Sbjct: 120 AFCHSHRV---LHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV----TLWY 172
Query: 505 LDPE------YYRNFQLTDKSDVYSFGVVLLELLTSK 535
PE YY + D++S G + E++T +
Sbjct: 173 RAPEILLGCKYY-----STAVDIWSLGCIFAEMVTRR 204
>pdb|3C4E|A Chain A, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|B Chain B, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|C Chain C, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|D Chain D, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
Length = 273
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 68/236 (28%), Positives = 108/236 (45%), Gaps = 28/236 (11%)
Query: 337 LIGTGGFGEVFKGI-LDDGTVTAIKRAK------LGNTKGTDLVLNEVRILCQVN--HRS 387
L+G+GGFG V+ GI + D AIK + G V EV +L +V+
Sbjct: 11 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 70
Query: 388 LVRLLGCCVELDQTLMIYEYI-PNGTLFDHLHCDFTGKWPPLPWHLRLVIAHQIAEGLTY 446
++RLL D ++I E P LF DF + L L Q+ E + +
Sbjct: 71 VIRLLDWFERPDSFVLILERPEPVQDLF-----DFITERGALQEELARSFFWQVLEAVRH 125
Query: 447 LHSAAVPPIYHRDVKSSNILLD-EKLNAKVSDFGLSRLVERTETNDSHIFTTAQGTMGYL 505
H+ V HRD+K NIL+D + K+ DFG L++ T ++T GT Y
Sbjct: 126 CHNCGV---LHRDIKDENILIDLNRGELKLIDFGSGALLKDT------VYTDFDGTRVYS 176
Query: 506 DPEYYRNFQLTDKS-DVYSFGVVLLELLTSKKAIDFNREEENVNLVVYMKKIMDEE 560
PE+ R + +S V+S G++L +++ I F +EE + V+ ++ + E
Sbjct: 177 PPEWIRYHRYHGRSAAVWSLGILLYDMVCGD--IPFEHDEEIIRGQVFFRQRVSSE 230
>pdb|4AS0|A Chain A, Cyclometalated Phthalimides As Protein Kinase Inhibitors
Length = 273
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 68/236 (28%), Positives = 108/236 (45%), Gaps = 28/236 (11%)
Query: 337 LIGTGGFGEVFKGI-LDDGTVTAIKRAK------LGNTKGTDLVLNEVRILCQVN--HRS 387
L+G+GGFG V+ GI + D AIK + G V EV +L +V+
Sbjct: 11 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 70
Query: 388 LVRLLGCCVELDQTLMIYEYI-PNGTLFDHLHCDFTGKWPPLPWHLRLVIAHQIAEGLTY 446
++RLL D ++I E P LF DF + L L Q+ E + +
Sbjct: 71 VIRLLDWFERPDSFVLILERPEPVQDLF-----DFITERGALQEELARSFFWQVLEAVRH 125
Query: 447 LHSAAVPPIYHRDVKSSNILLD-EKLNAKVSDFGLSRLVERTETNDSHIFTTAQGTMGYL 505
H+ V HRD+K NIL+D + K+ DFG L++ T ++T GT Y
Sbjct: 126 CHNCGV---LHRDIKDENILIDLNRGELKLIDFGSGALLKDT------VYTDFDGTRVYS 176
Query: 506 DPEYYRNFQLTDKS-DVYSFGVVLLELLTSKKAIDFNREEENVNLVVYMKKIMDEE 560
PE+ R + +S V+S G++L +++ I F +EE + V+ ++ + E
Sbjct: 177 PPEWIRYHRYHGRSAAVWSLGILLYDMVCGD--IPFEHDEEIIGGQVFFRQRVSSE 230
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 101/217 (46%), Gaps = 25/217 (11%)
Query: 328 ATNNFSKDNLIGTGGFGEVFKGILD-DGTVTAIKRAKLGN-TKGT-DLVLNEVRILCQVN 384
+ NF K IG G +G V+K G V A+K+ +L T+G + E+ +L ++N
Sbjct: 5 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 64
Query: 385 HRSLVRLLGCCVELDQTLMIYEYIPNGTLFDHLHCDFTGKWPPLPWHLRLVIAHQIAEGL 444
H ++V+LL ++ +++E++ TG PLP L Q+ +GL
Sbjct: 65 HPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGI--PLP--LIKSYLFQLLQGL 120
Query: 445 TYLHSAAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDSHIFTTAQGTMGY 504
+ HS V HRD+K N+L++ + K++DFGL+R H T+ Y
Sbjct: 121 AFCHSHRV---LHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV----TLWY 173
Query: 505 LDPE------YYRNFQLTDKSDVYSFGVVLLELLTSK 535
PE YY + D++S G + E++T +
Sbjct: 174 RAPEILLGCKYY-----STAVDIWSLGCIFAEMVTRR 205
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 101/217 (46%), Gaps = 25/217 (11%)
Query: 328 ATNNFSKDNLIGTGGFGEVFKGILD-DGTVTAIKRAKLGN-TKGT-DLVLNEVRILCQVN 384
+ NF K IG G +G V+K G V A+K+ +L T+G + E+ +L ++N
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 61
Query: 385 HRSLVRLLGCCVELDQTLMIYEYIPNGTLFDHLHCDFTGKWPPLPWHLRLVIAHQIAEGL 444
H ++V+LL ++ +++E++ TG PLP L Q+ +GL
Sbjct: 62 HPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGI--PLP--LIKSYLFQLLQGL 117
Query: 445 TYLHSAAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDSHIFTTAQGTMGY 504
+ HS V HRD+K N+L++ + K++DFGL+R H T+ Y
Sbjct: 118 AFCHSHRV---LHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVV----TLWY 170
Query: 505 LDPE------YYRNFQLTDKSDVYSFGVVLLELLTSK 535
PE YY + D++S G + E++T +
Sbjct: 171 RAPEILLGCKYY-----STAVDIWSLGCIFAEMVTRR 202
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 101/217 (46%), Gaps = 25/217 (11%)
Query: 328 ATNNFSKDNLIGTGGFGEVFKGILD-DGTVTAIKRAKLGN-TKGT-DLVLNEVRILCQVN 384
+ NF K IG G +G V+K G V A+K+ +L T+G + E+ +L ++N
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 61
Query: 385 HRSLVRLLGCCVELDQTLMIYEYIPNGTLFDHLHCDFTGKWPPLPWHLRLVIAHQIAEGL 444
H ++V+LL ++ +++E++ TG PLP L Q+ +GL
Sbjct: 62 HPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGI--PLP--LIKSYLFQLLQGL 117
Query: 445 TYLHSAAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDSHIFTTAQGTMGY 504
+ HS V HRD+K N+L++ + K++DFGL+R H T+ Y
Sbjct: 118 AFCHSHRV---LHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV----TLWY 170
Query: 505 LDPE------YYRNFQLTDKSDVYSFGVVLLELLTSK 535
PE YY + D++S G + E++T +
Sbjct: 171 RAPEILLGCKYY-----STAVDIWSLGCIFAEMVTRR 202
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 98/211 (46%), Gaps = 15/211 (7%)
Query: 330 NNFSKDNLIGTGGFGEVFK-GILDDGTVTAIKRAKLGNTKGT-DLVLNEVRILCQVNHRS 387
++F K + +G G G VFK G V A K L + ++ E+++L + N
Sbjct: 6 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPY 65
Query: 388 LVRLLGCCVELDQTLMIYEYIPNGTLFDHLHCDFTGKWPPLPWHLRLVIAHQIAEGLTYL 447
+V G + + E++ G+L L K +P + ++ + +GLTYL
Sbjct: 66 IVGFYGAFYSDGEISICMEHMDGGSLDQVLK-----KAGRIPEQILGKVSIAVIKGLTYL 120
Query: 448 HSAAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDSHIFTTAQGTMGYLDP 507
I HRDVK SNIL++ + K+ DFG+S + + N + GT Y+ P
Sbjct: 121 REKH--KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMAN------SFVGTRSYMSP 172
Query: 508 EYYRNFQLTDKSDVYSFGVVLLELLTSKKAI 538
E + + +SD++S G+ L+E+ + I
Sbjct: 173 ERLQGTHYSVQSDIWSMGLSLVEMAVGRYPI 203
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 101/217 (46%), Gaps = 25/217 (11%)
Query: 328 ATNNFSKDNLIGTGGFGEVFKGILD-DGTVTAIKRAKLGN-TKGT-DLVLNEVRILCQVN 384
+ NF K IG G +G V+K G V A+K+ +L T+G + E+ +L ++N
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 385 HRSLVRLLGCCVELDQTLMIYEYIPNGTLFDHLHCDFTGKWPPLPWHLRLVIAHQIAEGL 444
H ++V+LL ++ +++E++ TG PLP L Q+ +GL
Sbjct: 61 HPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGI--PLP--LIKSYLFQLLQGL 116
Query: 445 TYLHSAAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDSHIFTTAQGTMGY 504
+ HS V HRD+K N+L++ + K++DFGL+R H T+ Y
Sbjct: 117 AFCHSHRV---LHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV----TLWY 169
Query: 505 LDPE------YYRNFQLTDKSDVYSFGVVLLELLTSK 535
PE YY + D++S G + E++T +
Sbjct: 170 RAPEILLGCKYY-----STAVDIWSLGCIFAEMVTRR 201
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 101/217 (46%), Gaps = 25/217 (11%)
Query: 328 ATNNFSKDNLIGTGGFGEVFKGILD-DGTVTAIKRAKLGN-TKGT-DLVLNEVRILCQVN 384
+ NF K IG G +G V+K G V A+K+ +L T+G + E+ +L ++N
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 63
Query: 385 HRSLVRLLGCCVELDQTLMIYEYIPNGTLFDHLHCDFTGKWPPLPWHLRLVIAHQIAEGL 444
H ++V+LL ++ +++E++ TG PLP L Q+ +GL
Sbjct: 64 HPNIVKLLDVIHTENKLYLVFEHVDQDLKKFMDASALTGI--PLP--LIKSYLFQLLQGL 119
Query: 445 TYLHSAAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDSHIFTTAQGTMGY 504
+ HS V HRD+K N+L++ + K++DFGL+R H T+ Y
Sbjct: 120 AFCHSHRV---LHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV----TLWY 172
Query: 505 LDPE------YYRNFQLTDKSDVYSFGVVLLELLTSK 535
PE YY + D++S G + E++T +
Sbjct: 173 RAPEILLGCKYY-----STAVDIWSLGCIFAEMVTRR 204
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 98/211 (46%), Gaps = 15/211 (7%)
Query: 330 NNFSKDNLIGTGGFGEVFK-GILDDGTVTAIKRAKLGNTKGT-DLVLNEVRILCQVNHRS 387
++F K + +G G G VFK G V A K L + ++ E+++L + N
Sbjct: 6 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPY 65
Query: 388 LVRLLGCCVELDQTLMIYEYIPNGTLFDHLHCDFTGKWPPLPWHLRLVIAHQIAEGLTYL 447
+V G + + E++ G+L L K +P + ++ + +GLTYL
Sbjct: 66 IVGFYGAFYSDGEISICMEHMDGGSLDQVLK-----KAGRIPEQILGKVSIAVIKGLTYL 120
Query: 448 HSAAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDSHIFTTAQGTMGYLDP 507
I HRDVK SNIL++ + K+ DFG+S + + N + GT Y+ P
Sbjct: 121 REKH--KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMAN------SFVGTRSYMSP 172
Query: 508 EYYRNFQLTDKSDVYSFGVVLLELLTSKKAI 538
E + + +SD++S G+ L+E+ + I
Sbjct: 173 ERLQGTHYSVQSDIWSMGLSLVEMAVGRYPI 203
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 100/215 (46%), Gaps = 25/215 (11%)
Query: 330 NNFSKDNLIGTGGFGEVFKGILD-DGTVTAIKRAKLGN-TKGT-DLVLNEVRILCQVNHR 386
NF K IG G +G V+K G V A+K+ +L T+G + E+ +L ++NH
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 387 SLVRLLGCCVELDQTLMIYEYIPNGTLFDHLHCDFTGKWPPLPWHLRLVIAHQIAEGLTY 446
++V+LL ++ +++E++ TG PLP L Q+ +GL +
Sbjct: 62 NIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGI--PLP--LIKSYLFQLLQGLAF 117
Query: 447 LHSAAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDSHIFTTAQGTMGYLD 506
HS V HRD+K N+L++ + K++DFGL+R H T+ Y
Sbjct: 118 CHSHRV---LHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV----TLWYRA 170
Query: 507 PE------YYRNFQLTDKSDVYSFGVVLLELLTSK 535
PE YY + D++S G + E++T +
Sbjct: 171 PEILLGCKYY-----STAVDIWSLGCIFAEMVTRR 200
>pdb|4DTK|A Chain A, Novel And Selective Pan-Pim Kinase Inhibitor
Length = 276
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 68/236 (28%), Positives = 108/236 (45%), Gaps = 28/236 (11%)
Query: 337 LIGTGGFGEVFKGI-LDDGTVTAIKRAK------LGNTKGTDLVLNEVRILCQVN--HRS 387
L+G+GGFG V+ GI + D AIK + G V EV +L +V+
Sbjct: 14 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 73
Query: 388 LVRLLGCCVELDQTLMIYEY-IPNGTLFDHLHCDFTGKWPPLPWHLRLVIAHQIAEGLTY 446
++RLL D ++I E P LF DF + L L Q+ E + +
Sbjct: 74 VIRLLDWFERPDSFVLILERPEPVQDLF-----DFITERGALQEELARSFFWQVLEAVRH 128
Query: 447 LHSAAVPPIYHRDVKSSNILLD-EKLNAKVSDFGLSRLVERTETNDSHIFTTAQGTMGYL 505
H+ V HRD+K NIL+D + K+ DFG L++ T ++T GT Y
Sbjct: 129 CHNCGV---LHRDIKDENILIDLNRGELKLIDFGSGALLKDT------VYTDFDGTRVYS 179
Query: 506 DPEYYRNFQLTDKS-DVYSFGVVLLELLTSKKAIDFNREEENVNLVVYMKKIMDEE 560
PE+ R + +S V+S G++L +++ I F +EE + V+ ++ + E
Sbjct: 180 PPEWIRYHRYHGRSAAVWSLGILLYDMVCGD--IPFEHDEEIIRGQVFFRQRVSSE 233
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 101/217 (46%), Gaps = 25/217 (11%)
Query: 328 ATNNFSKDNLIGTGGFGEVFKGILD-DGTVTAIKRAKLGN-TKGT-DLVLNEVRILCQVN 384
+ NF K IG G +G V+K G V A+K+ +L T+G + E+ +L ++N
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 385 HRSLVRLLGCCVELDQTLMIYEYIPNGTLFDHLHCDFTGKWPPLPWHLRLVIAHQIAEGL 444
H ++V+LL ++ +++E++ TG PLP L Q+ +GL
Sbjct: 61 HPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGI--PLP--LIKSYLFQLLQGL 116
Query: 445 TYLHSAAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDSHIFTTAQGTMGY 504
+ HS V HRD+K N+L++ + K++DFGL+R H T+ Y
Sbjct: 117 AFCHSHRV---LHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV----TLWY 169
Query: 505 LDPE------YYRNFQLTDKSDVYSFGVVLLELLTSK 535
PE YY + D++S G + E++T +
Sbjct: 170 RAPEILLGCKYY-----STAVDIWSLGCIFAEMVTRR 201
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/238 (24%), Positives = 107/238 (44%), Gaps = 37/238 (15%)
Query: 324 EIRRATNNFSKDNLIGTGGFGEVFK----GILDDGTVTAIKRAKL---GNTKGTDLVLNE 376
E R F K ++G+G FG+V GI G + L ++ + +++E
Sbjct: 41 EFPRENLEFGK--VLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSE 98
Query: 377 VRILCQV-NHRSLVRLLGCCVELDQTLMIYEYIPNGTLFDHLHC---------------- 419
++++ Q+ +H ++V LLG C +I+EY G L ++L
Sbjct: 99 LKMMTQLGSHENIVNLLGACTLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQK 158
Query: 420 --DFTGKWPPLPWHLRLVIAHQIAEGLTYLHSAAVPPIYHRDVKSSNILLDEKLNAKVSD 477
+ L + L A+Q+A+G+ +L + HRD+ + N+L+ K+ D
Sbjct: 159 RLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFKSCV---HRDLAARNVLVTHGKVVKICD 215
Query: 478 FGLSRLVERTETNDSHIFTTAQGTM--GYLDPEYYRNFQLTDKSDVYSFGVVLLELLT 533
FGL+R + +DS+ + ++ PE T KSDV+S+G++L E+ +
Sbjct: 216 FGLARDI----MSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFS 269
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 98/211 (46%), Gaps = 15/211 (7%)
Query: 330 NNFSKDNLIGTGGFGEVFK-GILDDGTVTAIKRAKLGNTKGT-DLVLNEVRILCQVNHRS 387
++F K + +G G G VFK G V A K L + ++ E+++L + N
Sbjct: 6 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPY 65
Query: 388 LVRLLGCCVELDQTLMIYEYIPNGTLFDHLHCDFTGKWPPLPWHLRLVIAHQIAEGLTYL 447
+V G + + E++ G+L L K +P + ++ + +GLTYL
Sbjct: 66 IVGFYGAFYSDGEISICMEHMDGGSLDQVLK-----KAGRIPEQILGKVSIAVIKGLTYL 120
Query: 448 HSAAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDSHIFTTAQGTMGYLDP 507
I HRDVK SNIL++ + K+ DFG+S + + N + GT Y+ P
Sbjct: 121 REKH--KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMAN------SFVGTRSYMSP 172
Query: 508 EYYRNFQLTDKSDVYSFGVVLLELLTSKKAI 538
E + + +SD++S G+ L+E+ + I
Sbjct: 173 ERLQGTHYSVQSDIWSMGLSLVEMAVGRYPI 203
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 88/211 (41%), Gaps = 24/211 (11%)
Query: 330 NNFSKDNLIGTGGFGEVF-------KGILDDGTVTAIKRAKLGNTKGTDLVLNEVRILCQ 382
+F +G G FG V+ K IL + + + +L + EV I
Sbjct: 12 EDFDIGRPLGKGKFGNVYLARERQSKFIL---ALKVLFKTQLEKAGVEHQLRREVEIQSH 68
Query: 383 VNHRSLVRLLGCCVELDQTLMIYEYIPNGTLFDHLHCDFTGKWPPLPWHLRLVIAHQIAE 442
+ H +++RL G + + +I EY P GT++ L K ++A
Sbjct: 69 LRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQ-----KLSRFDEQRTATYITELAN 123
Query: 443 GLTYLHSAAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDSHIFTTAQGTM 502
L+Y HS V HRD+K N+LL K++DFG S + + T GT+
Sbjct: 124 ALSYCHSKRV---IHRDIKPENLLLGSNGELKIADFGWSVHAPSSRRD------TLCGTL 174
Query: 503 GYLDPEYYRNFQLTDKSDVYSFGVVLLELLT 533
YL PE +K D++S GV+ E L
Sbjct: 175 DYLPPEMIEGRMHDEKVDLWSLGVLCYEFLV 205
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 98/211 (46%), Gaps = 15/211 (7%)
Query: 330 NNFSKDNLIGTGGFGEVFK-GILDDGTVTAIKRAKLGNTKGT-DLVLNEVRILCQVNHRS 387
++F K + +G G G VFK G V A K L + ++ E+++L + N
Sbjct: 6 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPY 65
Query: 388 LVRLLGCCVELDQTLMIYEYIPNGTLFDHLHCDFTGKWPPLPWHLRLVIAHQIAEGLTYL 447
+V G + + E++ G+L L K +P + ++ + +GLTYL
Sbjct: 66 IVGFYGAFYSDGEISICMEHMDGGSLDQVLK-----KAGRIPEQILGKVSIAVIKGLTYL 120
Query: 448 HSAAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDSHIFTTAQGTMGYLDP 507
I HRDVK SNIL++ + K+ DFG+S + + N + GT Y+ P
Sbjct: 121 REKH--KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMAN------SFVGTRSYMSP 172
Query: 508 EYYRNFQLTDKSDVYSFGVVLLELLTSKKAI 538
E + + +SD++S G+ L+E+ + I
Sbjct: 173 ERLQGTHYSVQSDIWSMGLSLVEMAVGRYPI 203
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 98/211 (46%), Gaps = 15/211 (7%)
Query: 330 NNFSKDNLIGTGGFGEVFK-GILDDGTVTAIKRAKLGNTKGT-DLVLNEVRILCQVNHRS 387
++F K + +G G G VFK G V A K L + ++ E+++L + N
Sbjct: 6 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPY 65
Query: 388 LVRLLGCCVELDQTLMIYEYIPNGTLFDHLHCDFTGKWPPLPWHLRLVIAHQIAEGLTYL 447
+V G + + E++ G+L L K +P + ++ + +GLTYL
Sbjct: 66 IVGFYGAFYSDGEISICMEHMDGGSLDQVLK-----KAGRIPEQILGKVSIAVIKGLTYL 120
Query: 448 HSAAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDSHIFTTAQGTMGYLDP 507
I HRDVK SNIL++ + K+ DFG+S + + N + GT Y+ P
Sbjct: 121 REKH--KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMAN------SFVGTRSYMSP 172
Query: 508 EYYRNFQLTDKSDVYSFGVVLLELLTSKKAI 538
E + + +SD++S G+ L+E+ + I
Sbjct: 173 ERLQGTHYSVQSDIWSMGLSLVEMAVGRYPI 203
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 100/217 (46%), Gaps = 25/217 (11%)
Query: 328 ATNNFSKDNLIGTGGFGEVFKGILD-DGTVTAIKRAKLGN-TKGT-DLVLNEVRILCQVN 384
+ NF K IG G +G V+K G V A+K+ +L T+G + E+ +L ++N
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 63
Query: 385 HRSLVRLLGCCVELDQTLMIYEYIPNGTLFDHLHCDFTGKWPPLPWHLRLVIAHQIAEGL 444
H ++V+LL ++ +++E++ TG +P L Q+ +GL
Sbjct: 64 HPNIVKLLDVIHTENKLYLVFEFLSMDLKKFMDASALTG----IPLPLIKSYLFQLLQGL 119
Query: 445 TYLHSAAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDSHIFTTAQGTMGY 504
+ HS V HRD+K N+L++ + K++DFGL+R H T+ Y
Sbjct: 120 AFCHSHRV---LHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVV----TLWY 172
Query: 505 LDPE------YYRNFQLTDKSDVYSFGVVLLELLTSK 535
PE YY + D++S G + E++T +
Sbjct: 173 RAPEILLGCKYY-----STAVDIWSLGCIFAEMVTRR 204
>pdb|1YHS|A Chain A, Crystal Structure Of Pim-1 Bound To Staurosporine
pdb|1YI3|A Chain A, Crystal Structure Of Pim-1 Bound To Ly294002
pdb|1YI4|A Chain A, Structure Of Pim-1 Bound To Adenosine
Length = 273
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 68/236 (28%), Positives = 108/236 (45%), Gaps = 28/236 (11%)
Query: 337 LIGTGGFGEVFKGI-LDDGTVTAIKRAK------LGNTKGTDLVLNEVRILCQVN--HRS 387
L+G+GGFG V+ GI + D AIK + G V EV +L +V+
Sbjct: 11 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 70
Query: 388 LVRLLGCCVELDQTLMIYEYI-PNGTLFDHLHCDFTGKWPPLPWHLRLVIAHQIAEGLTY 446
++RLL D ++I E P LF DF + L L Q+ E + +
Sbjct: 71 VIRLLDWFERPDSFVLILERPEPVQDLF-----DFITERGALQEELARSFFWQVLEAVRH 125
Query: 447 LHSAAVPPIYHRDVKSSNILLD-EKLNAKVSDFGLSRLVERTETNDSHIFTTAQGTMGYL 505
H+ V HRD+K NIL+D + K+ DFG L++ T ++T GT Y
Sbjct: 126 CHNXGV---LHRDIKDENILIDLNRGELKLIDFGSGALLKDT------VYTDFDGTRVYS 176
Query: 506 DPEYYRNFQLTDKS-DVYSFGVVLLELLTSKKAIDFNREEENVNLVVYMKKIMDEE 560
PE+ R + +S V+S G++L +++ I F +EE + V+ ++ + E
Sbjct: 177 PPEWIRYHRYHGRSAAVWSLGILLYDMVCGD--IPFEHDEEIIRGQVFFRQRVSXE 230
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 100/215 (46%), Gaps = 25/215 (11%)
Query: 330 NNFSKDNLIGTGGFGEVFKGILD-DGTVTAIKRAKLGN-TKGT-DLVLNEVRILCQVNHR 386
NF K IG G +G V+K G V A+K+ +L T+G + E+ +L ++NH
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 387 SLVRLLGCCVELDQTLMIYEYIPNGTLFDHLHCDFTGKWPPLPWHLRLVIAHQIAEGLTY 446
++V+LL ++ +++E++ TG PLP L Q+ +GL +
Sbjct: 62 NIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGI--PLP--LIKSYLFQLLQGLAF 117
Query: 447 LHSAAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDSHIFTTAQGTMGYLD 506
HS V HRD+K N+L++ + K++DFGL+R H T+ Y
Sbjct: 118 CHSHRV---LHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV----TLWYRA 170
Query: 507 PE------YYRNFQLTDKSDVYSFGVVLLELLTSK 535
PE YY + D++S G + E++T +
Sbjct: 171 PEILLGCKYY-----STAVDIWSLGCIFAEMVTRR 200
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 100/215 (46%), Gaps = 25/215 (11%)
Query: 330 NNFSKDNLIGTGGFGEVFKGILD-DGTVTAIKRAKLGN-TKGT-DLVLNEVRILCQVNHR 386
NF K IG G +G V+K G V A+K+ +L T+G + E+ +L ++NH
Sbjct: 4 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 63
Query: 387 SLVRLLGCCVELDQTLMIYEYIPNGTLFDHLHCDFTGKWPPLPWHLRLVIAHQIAEGLTY 446
++V+LL ++ +++E++ TG PLP L Q+ +GL +
Sbjct: 64 NIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGI--PLP--LIKSYLFQLLQGLAF 119
Query: 447 LHSAAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDSHIFTTAQGTMGYLD 506
HS V HRD+K N+L++ + K++DFGL+R H T+ Y
Sbjct: 120 CHSHRV---LHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV----TLWYRA 172
Query: 507 PE------YYRNFQLTDKSDVYSFGVVLLELLTSK 535
PE YY + D++S G + E++T +
Sbjct: 173 PEILLGCKYY-----STAVDIWSLGCIFAEMVTRR 202
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 96/211 (45%), Gaps = 28/211 (13%)
Query: 332 FSKDNLIGTGGFGEVFKGILDD----GTVTAIKRAKLGNTKGTDLVL-NEVRILCQVNHR 386
F +GTG F EV +L + G + A+K KG + + NE+ +L ++ H
Sbjct: 24 FEFKETLGTGAFSEV---VLAEEKATGKLFAVKCIPKKALKGKESSIENEIAVLRKIKHE 80
Query: 387 SLVRLLGCCVELDQTLMIYEYIPNGTLFDHL--HCDFTGKWPPLPWHLRLVIAHQIAEGL 444
++V L + ++ + + G LFD + +T K + Q+ + +
Sbjct: 81 NIVALEDIYESPNHLYLVMQLVSGGELFDRIVEKGFYTEKDAS-------TLIRQVLDAV 133
Query: 445 TYLHSAAVPPIYHRDVKSSNILL---DEKLNAKVSDFGLSRLVERTETNDSHIFTTAQGT 501
YLH I HRD+K N+L DE+ +SDFGLS++ + + + +TA GT
Sbjct: 134 YYLHRMG---IVHRDLKPENLLYYSQDEESKIMISDFGLSKMEGKGD-----VMSTACGT 185
Query: 502 MGYLDPEYYRNFQLTDKSDVYSFGVVLLELL 532
GY+ PE + D +S GV+ LL
Sbjct: 186 PGYVAPEVLAQKPYSKAVDCWSIGVIAYILL 216
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/242 (24%), Positives = 103/242 (42%), Gaps = 28/242 (11%)
Query: 305 EEMLNAKAAGKSARIFTGKEIRRATNNFSKDNLIGTGGFGEVFKGILDDG----TVTAIK 360
+E +N + +GK++ +F +IG G + +V L + +K
Sbjct: 2 KEAMNTRESGKASSSL-------GLQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVK 54
Query: 361 RAKLGNTKGTDLVLNEVRILCQV-NHRSLVRLLGCCVELDQTLMIYEYIPNGTLFDHLHC 419
+ + + + D V E + Q NH LV L C + + EY+ G L H+
Sbjct: 55 KELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQ- 113
Query: 420 DFTGKWPPLPWHLRLVIAHQIAEGLTYLHSAAVPPIYHRDVKSSNILLDEKLNAKVSDFG 479
+ LP + +I+ L YLH I +RD+K N+LLD + + K++D+G
Sbjct: 114 ----RQRKLPEEHARFYSAEISLALNYLHERG---IIYRDLKLDNVLLDSEGHIKLTDYG 166
Query: 480 LSRLVERTETNDSHIFTTAQ--GTMGYLDPEYYRNFQLTDKSDVYSFGVVLLELLTSKKA 537
+ + E D TT+ GT Y+ PE R D ++ GV++ E++ +
Sbjct: 167 MCK--EGLRPGD----TTSXFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSP 220
Query: 538 ID 539
D
Sbjct: 221 FD 222
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 101/217 (46%), Gaps = 25/217 (11%)
Query: 328 ATNNFSKDNLIGTGGFGEVFKGILD-DGTVTAIKRAKLGN-TKGT-DLVLNEVRILCQVN 384
+ NF K IG G +G V+K G V A+K+ +L T+G + E+ +L ++N
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 61
Query: 385 HRSLVRLLGCCVELDQTLMIYEYIPNGTLFDHLHCDFTGKWPPLPWHLRLVIAHQIAEGL 444
H ++V+LL ++ +++E++ TG PLP L Q+ +GL
Sbjct: 62 HPNIVKLLDVIHTENKLYLVFEFLSMDLKKFMDASALTGI--PLP--LIKSYLFQLLQGL 117
Query: 445 TYLHSAAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDSHIFTTAQGTMGY 504
+ HS V HRD+K N+L++ + K++DFGL+R H T+ Y
Sbjct: 118 AFCHSHRV---LHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVV----TLWY 170
Query: 505 LDPE------YYRNFQLTDKSDVYSFGVVLLELLTSK 535
PE YY + D++S G + E++T +
Sbjct: 171 RAPEILLGCKYY-----STAVDIWSLGCIFAEMVTRR 202
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 96/208 (46%), Gaps = 30/208 (14%)
Query: 336 NLIGTGGFGEVFKGILDDG------TVTAIKRAKLGNTKGTDLVLNEVRILCQVNHRSLV 389
+++GTG F EV + +D + I + L +G+ + NE+ +L ++ H ++V
Sbjct: 24 DVLGTGAFSEVI--LAEDKRTQKLVAIKCIAKKALEGKEGS--MENEIAVLHKIKHPNIV 79
Query: 390 RLLGCCVELDQTLMIYEYIPNGTLFDHL--HCDFTGKWPPLPWHLRLVIAHQIAEGLTYL 447
L +I + + G LFD + +T + RL+ Q+ + + YL
Sbjct: 80 ALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDAS-----RLIF--QVLDAVKYL 132
Query: 448 HSAAVPPIYHRDVKSSNIL---LDEKLNAKVSDFGLSRLVERTETNDSHIFTTAQGTMGY 504
H I HRD+K N+L LDE +SDFGLS++ + + +TA GT GY
Sbjct: 133 HDLG---IVHRDLKPENLLYYSLDEDSKIMISDFGLSKM-----EDPGSVLSTACGTPGY 184
Query: 505 LDPEYYRNFQLTDKSDVYSFGVVLLELL 532
+ PE + D +S GV+ LL
Sbjct: 185 VAPEVLAQKPYSKAVDCWSIGVIAYILL 212
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 102/220 (46%), Gaps = 24/220 (10%)
Query: 325 IRRATNNFSKDNLIGTGGFGEVFKGI-LDDGTVTAIKRAKLGNTKGTDLVLNEVRILCQV 383
+R F L+G G +G+V+KG + G + AIK + + + + E+ +L +
Sbjct: 19 LRDPAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDEEEE-IKQEINMLKKY 77
Query: 384 -NHRSLVRLLGCCVEL------DQTLMIYEYIPNGTLFDHLHCDFTGKWPPLPWHLRLVI 436
+HR++ G ++ DQ ++ E+ G++ D + K L I
Sbjct: 78 SHHRNIATYYGAFIKKNPPGMDDQLWLVMEFCGAGSVTDLIK---NTKGNTLKEEWIAYI 134
Query: 437 AHQIAEGLTYLHSAAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDSHIFT 496
+I GL++LH V HRD+K N+LL E K+ DFG+S ++RT +
Sbjct: 135 CREILRGLSHLHQHKV---IHRDIKGQNVLLTENAEVKLVDFGVSAQLDRTVGRRN---- 187
Query: 497 TAQGTMGYLDPEYYRNFQLTD-----KSDVYSFGVVLLEL 531
T GT ++ PE + D KSD++S G+ +E+
Sbjct: 188 TFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEM 227
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 74/272 (27%), Positives = 113/272 (41%), Gaps = 30/272 (11%)
Query: 300 LIKQREEMLNAKAAGKS-------ARIFTGKEIRRAT-NNFSKDNLIGTGGFGEVFKGIL 351
L KQ EE ++ ++ S + K R T N F L+G G FG+V IL
Sbjct: 113 LKKQEEEEMDFRSGSPSDNSGAEEMEVSLAKPKHRVTMNEFEYLKLLGKGTFGKV---IL 169
Query: 352 ----DDGTVTAIKRAKLGNTKGTDLV---LNEVRILCQVNHRSLVRLLGCCVELDQTLMI 404
G A+K K D V L E R+L H L L D+ +
Sbjct: 170 VKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFV 229
Query: 405 YEYIPNGTLFDHLHCDFTGKWPPLPWHLRLVIAHQIAEGLTYLHSAAVPPIYHRDVKSSN 464
EY G LF HL + ++ +I L YLHS + +RD+K N
Sbjct: 230 MEYANGGELFFHLSRERVFSEDRARFY-----GAEIVSALDYLHSEK--NVVYRDLKLEN 282
Query: 465 ILLDEKLNAKVSDFGLSRLVERTETNDSHIFTTAQGTMGYLDPEYYRNFQLTDKSDVYSF 524
++LD+ + K++DFGL + D T GT YL PE + D +
Sbjct: 283 LMLDKDGHIKITDFGLC----KEGIKDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGL 338
Query: 525 GVVLLELLTSKKAIDFNREEENVNLVVYMKKI 556
GVV+ E++ + +N++ E + ++ M++I
Sbjct: 339 GVVMYEMMCGRLPF-YNQDHEKLFELILMEEI 369
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/230 (25%), Positives = 99/230 (43%), Gaps = 17/230 (7%)
Query: 321 TGKEIRRATNNFSKDNLIGTGGFGEVF----KGILDDGTVTAIKRAKLGNTKGTDLVLNE 376
G R +F+ ++G G FG+V KG + V +K+ + + + E
Sbjct: 11 NGNRDRMKLTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVE 70
Query: 377 VRILCQVNHRSLVRLLGCCVE-LDQTLMIYEYIPNGTLFDHLHCDFTGKWPPLPWHLRLV 435
R+L + L C + +D+ + EY+ G L H+ K P ++
Sbjct: 71 KRVLALPGKPPFLTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQVGRFKEPHAVFY---- 126
Query: 436 IAHQIAEGLTYLHSAAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDSHIF 495
A +IA GL +L S I +RD+K N++LD + + K++DFG+ + D
Sbjct: 127 -AAEIAIGLFFLQSKG---IIYRDLKLDNVMLDSEGHIKIADFGMC----KENIWDGVTT 178
Query: 496 TTAQGTMGYLDPEYYRNFQLTDKSDVYSFGVVLLELLTSKKAIDFNREEE 545
GT Y+ PE D ++FGV+L E+L + + E+E
Sbjct: 179 KXFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDE 228
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 98/211 (46%), Gaps = 15/211 (7%)
Query: 330 NNFSKDNLIGTGGFGEVFK-GILDDGTVTAIKRAKLGNTKGT-DLVLNEVRILCQVNHRS 387
++F K + +G G G VFK G V A K L + ++ E+++L + N
Sbjct: 33 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPY 92
Query: 388 LVRLLGCCVELDQTLMIYEYIPNGTLFDHLHCDFTGKWPPLPWHLRLVIAHQIAEGLTYL 447
+V G + + E++ G+L L K +P + ++ + +GLTYL
Sbjct: 93 IVGFYGAFYSDGEISICMEHMDGGSLDQVLK-----KAGRIPEQILGKVSIAVIKGLTYL 147
Query: 448 HSAAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDSHIFTTAQGTMGYLDP 507
I HRDVK SNIL++ + K+ DFG+S + + N + GT Y+ P
Sbjct: 148 REKH--KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMAN------SFVGTRSYMSP 199
Query: 508 EYYRNFQLTDKSDVYSFGVVLLELLTSKKAI 538
E + + +SD++S G+ L+E+ + I
Sbjct: 200 ERLQGTHYSVQSDIWSMGLSLVEMAVGRYPI 230
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/219 (27%), Positives = 96/219 (43%), Gaps = 18/219 (8%)
Query: 326 RRATNNFSKDNLIGTGGFGEVFKGILD-DGTVTAIK---RAKLGNTKGTDLVLNEVRILC 381
R ++ + +G G FG+V G G A+K R K+ + + E++ L
Sbjct: 7 RVKIGHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLK 66
Query: 382 QVNHRSLVRLLGCCVELDQTLMIYEYIPNGTLFDHLHCDFTGKWPPLPWHLRLVIAHQIA 441
H +++L M+ EY+ G LFD++ C G+ + RL QI
Sbjct: 67 LFRHPHIIKLYQVISTPTDFFMVMEYVSGGELFDYI-CK-HGRVEEMEAR-RLF--QQIL 121
Query: 442 EGLTYLHSAAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDSHIFTTAQGT 501
+ Y H V HRD+K N+LLD +NAK++DFGLS ++ +D + G+
Sbjct: 122 SAVDYCHRHMV---VHRDLKPENVLLDAHMNAKIADFGLSNMM-----SDGEFLRDSCGS 173
Query: 502 MGYLDPEYYRN-FQLTDKSDVYSFGVVLLELLTSKKAID 539
Y PE + D++S GV+L LL D
Sbjct: 174 PNYAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPFD 212
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/227 (25%), Positives = 95/227 (41%), Gaps = 21/227 (9%)
Query: 326 RRATNNFSKDNLIGTGGFGEVF----KGILDDGTVTAIKRAKLGNTKGTDLVLNEVRILC 381
R +NF ++G G FG+V K D V +K+ + + + E RIL
Sbjct: 19 RLGIDNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILS 78
Query: 382 QV-NHRSLVRLLGCCVELDQTLMIYEYIPNGTLFDHLHCDFTGKWPPLPWHLRLVIAHQI 440
NH L +L C D+ + E++ G L H+ K A +I
Sbjct: 79 LARNHPFLTQLFCCFQTPDRLFFVMEFVNGGDLMFHIQ-----KSRRFDEARARFYAAEI 133
Query: 441 AEGLTYLHSAAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDSHIFTTAQ- 499
L +LH I +RD+K N+LLD + + K++DFG+ + + TTA
Sbjct: 134 ISALMFLHDKG---IIYRDLKLDNVLLDHEGHCKLADFGMCK------EGICNGVTTATF 184
Query: 500 -GTMGYLDPEYYRNFQLTDKSDVYSFGVVLLELLTSKKAIDFNREEE 545
GT Y+ PE + D ++ GV+L E+L + E++
Sbjct: 185 CGTPDYIAPEILQEMLYGPAVDWWAMGVLLYEMLCGHAPFEAENEDD 231
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 100/206 (48%), Gaps = 29/206 (14%)
Query: 338 IGTGGFGEVFKGILDDGTVTAIKRAKLGNTKGTDLV---LNEVRILCQVNHRSLVRLLGC 394
+G G FG+V+K + +V A AK+ +TK + + + E+ IL +H ++V+LL
Sbjct: 45 LGDGAFGKVYKAQNKETSVLA--AAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDA 102
Query: 395 CVELDQTLMIYEYIPNGTLFDHLHCDFTGKWPPLPWHLRLVIAHQIAEGLTYLHSAAVPP 454
+ ++ E+ G + D + + PL V+ Q + L YLH
Sbjct: 103 FYYENNLWILIEFCAGGAV-DAVMLELER---PLTESQIQVVCKQTLDALNYLHDNK--- 155
Query: 455 IYHRDVKSSNILLDEKLNAKVSDFGLS----RLVERTETNDSHIFTTAQGTMGYLDPEYY 510
I HRD+K+ NIL + K++DFG+S R ++R DS I GT ++ PE
Sbjct: 156 IIHRDLKAGNILFTLDGDIKLADFGVSAKNTRXIQR---RDSFI-----GTPYWMAPEVV 207
Query: 511 -----RNFQLTDKSDVYSFGVVLLEL 531
++ K+DV+S G+ L+E+
Sbjct: 208 MCETSKDRPYDYKADVWSLGITLIEM 233
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 96/208 (46%), Gaps = 30/208 (14%)
Query: 336 NLIGTGGFGEVFKGILDDG------TVTAIKRAKLGNTKGTDLVLNEVRILCQVNHRSLV 389
+++GTG F EV + +D + I + L +G+ + NE+ +L ++ H ++V
Sbjct: 24 DVLGTGAFSEVI--LAEDKRTQKLVAIKCIAKEALEGKEGS--MENEIAVLHKIKHPNIV 79
Query: 390 RLLGCCVELDQTLMIYEYIPNGTLFDHL--HCDFTGKWPPLPWHLRLVIAHQIAEGLTYL 447
L +I + + G LFD + +T + RL+ Q+ + + YL
Sbjct: 80 ALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDAS-----RLIF--QVLDAVKYL 132
Query: 448 HSAAVPPIYHRDVKSSNIL---LDEKLNAKVSDFGLSRLVERTETNDSHIFTTAQGTMGY 504
H I HRD+K N+L LDE +SDFGLS++ + + +TA GT GY
Sbjct: 133 HDLG---IVHRDLKPENLLYYSLDEDSKIMISDFGLSKM-----EDPGSVLSTACGTPGY 184
Query: 505 LDPEYYRNFQLTDKSDVYSFGVVLLELL 532
+ PE + D +S GV+ LL
Sbjct: 185 VAPEVLAQKPYSKAVDCWSIGVIAYILL 212
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 62/217 (28%), Positives = 106/217 (48%), Gaps = 35/217 (16%)
Query: 331 NFSKDNLIGTGGFGEVFKGIL-DDGTVTAIKRAKLGNTKGTDLVLNEVRILCQVNHRSLV 389
+++ +IG G FG V++ L D G + AIK+ L + + + E++I+ +++H ++V
Sbjct: 57 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV-LQDKRFKN---RELQIMRKLDHCNIV 112
Query: 390 RL----LGCCVELDQTLM--IYEYIPNGTLFDHLHCDFTGKWPPLPWHLRLVIAHQIAEG 443
RL + D+ + + +Y+P H + P+ +++L + +Q+
Sbjct: 113 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPV-IYVKLYM-YQLFRS 170
Query: 444 LTYLHSAAVPPIYHRDVKSSNILLDEKLNA-KVSDFGLSRLVERTETNDSHIFTTAQGTM 502
L Y+HS I HRD+K N+LLD K+ DFG ++ + R E N S+I +
Sbjct: 171 LAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICS------ 221
Query: 503 GYLDPEYYRNFQL-------TDKSDVYSFGVVLLELL 532
YYR +L T DV+S G VL ELL
Sbjct: 222 -----RYYRAPELIFGATDYTSSIDVWSAGCVLAELL 253
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 66/236 (27%), Positives = 102/236 (43%), Gaps = 27/236 (11%)
Query: 330 NNFSKDNLIGTGGFGEVFKGIL----DDGTVTAIKRAKLGNTKGTDLV---LNEVRILCQ 382
N+F L+G G FG+V IL G A+K + D V + E R+L
Sbjct: 5 NDFDYLKLLGKGTFGKV---ILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQN 61
Query: 383 VNHRSLVRLLGCCVELDQTLMIYEYIPNGTLFDHLHCD--FTGKWPPLPWHLRLVIAHQI 440
H L L D+ + EY G LF HL + FT + +I
Sbjct: 62 TRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARF-------YGAEI 114
Query: 441 AEGLTYLHSAAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDSHIFTTAQG 500
L YLHS V +RD+K N++LD+ + K++DFGL + +D T G
Sbjct: 115 VSALEYLHSRDV---VYRDIKLENLMLDKDGHIKITDFGLC----KEGISDGATMKTFCG 167
Query: 501 TMGYLDPEYYRNFQLTDKSDVYSFGVVLLELLTSKKAIDFNREEENVNLVVYMKKI 556
T YL PE + D + GVV+ E++ + +N++ E + ++ M++I
Sbjct: 168 TPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPF-YNQDHERLFELILMEEI 222
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 92/203 (45%), Gaps = 24/203 (11%)
Query: 337 LIGTGGFGEVF--KGILDDGTVTAIKRAKLGNTKGTDLVLNEVRILCQVNHRSLVRLLGC 394
++G+G F EVF K L G + A+K K + NE+ +L ++ H ++V L
Sbjct: 16 VLGSGAFSEVFLVKQRLT-GKLFALKCIKKSPAFRDSSLENEIAVLKKIKHENIVTLEDI 74
Query: 395 CVELDQTLMIYEYIPNGTLFDHL--HCDFTGKWPPLPWHLRLVIAHQIAEGLTYLHSAAV 452
++ + + G LFD + +T K L + Q+ + YLH
Sbjct: 75 YESTTHYYLVMQLVSGGELFDRILERGVYTEKDASL-------VIQQVLSAVKYLHENG- 126
Query: 453 PPIYHRDVKSSNILL---DEKLNAKVSDFGLSRLVERTETNDSHIFTTAQGTMGYLDPEY 509
I HRD+K N+L +E ++DFGLS++ E N I +TA GT GY+ PE
Sbjct: 127 --IVHRDLKPENLLYLTPEENSKIMITDFGLSKM----EQNG--IMSTACGTPGYVAPEV 178
Query: 510 YRNFQLTDKSDVYSFGVVLLELL 532
+ D +S GV+ LL
Sbjct: 179 LAQKPYSKAVDCWSIGVITYILL 201
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 96/208 (46%), Gaps = 30/208 (14%)
Query: 336 NLIGTGGFGEVFKGILDDG------TVTAIKRAKLGNTKGTDLVLNEVRILCQVNHRSLV 389
+++GTG F EV + +D + I + L +G+ + NE+ +L ++ H ++V
Sbjct: 24 DVLGTGAFSEVI--LAEDKRTQKLVAIKCIAKEALEGKEGS--MENEIAVLHKIKHPNIV 79
Query: 390 RLLGCCVELDQTLMIYEYIPNGTLFDHL--HCDFTGKWPPLPWHLRLVIAHQIAEGLTYL 447
L +I + + G LFD + +T + RL+ Q+ + + YL
Sbjct: 80 ALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDAS-----RLIF--QVLDAVKYL 132
Query: 448 HSAAVPPIYHRDVKSSNIL---LDEKLNAKVSDFGLSRLVERTETNDSHIFTTAQGTMGY 504
H I HRD+K N+L LDE +SDFGLS++ + + +TA GT GY
Sbjct: 133 HDLG---IVHRDLKPENLLYYSLDEDSKIMISDFGLSKM-----EDPGSVLSTACGTPGY 184
Query: 505 LDPEYYRNFQLTDKSDVYSFGVVLLELL 532
+ PE + D +S GV+ LL
Sbjct: 185 VAPEVLAQKPYSKAVDCWSIGVIAYILL 212
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 66/236 (27%), Positives = 102/236 (43%), Gaps = 27/236 (11%)
Query: 330 NNFSKDNLIGTGGFGEVFKGIL----DDGTVTAIKRAKLGNTKGTDLV---LNEVRILCQ 382
N+F L+G G FG+V IL G A+K + D V + E R+L
Sbjct: 8 NDFDYLKLLGKGTFGKV---ILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQN 64
Query: 383 VNHRSLVRLLGCCVELDQTLMIYEYIPNGTLFDHLHCD--FTGKWPPLPWHLRLVIAHQI 440
H L L D+ + EY G LF HL + FT + +I
Sbjct: 65 TRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARF-------YGAEI 117
Query: 441 AEGLTYLHSAAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDSHIFTTAQG 500
L YLHS V +RD+K N++LD+ + K++DFGL + +D T G
Sbjct: 118 VSALEYLHSRDV---VYRDIKLENLMLDKDGHIKITDFGLC----KEGISDGATMKTFCG 170
Query: 501 TMGYLDPEYYRNFQLTDKSDVYSFGVVLLELLTSKKAIDFNREEENVNLVVYMKKI 556
T YL PE + D + GVV+ E++ + +N++ E + ++ M++I
Sbjct: 171 TPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPF-YNQDHERLFELILMEEI 225
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 62/217 (28%), Positives = 106/217 (48%), Gaps = 35/217 (16%)
Query: 331 NFSKDNLIGTGGFGEVFKGIL-DDGTVTAIKRAKLGNTKGTDLVLNEVRILCQVNHRSLV 389
+++ +IG G FG V++ L D G + AIK+ L + + + E++I+ +++H ++V
Sbjct: 55 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV-LQDKRFKN---RELQIMRKLDHCNIV 110
Query: 390 RL----LGCCVELDQTLM--IYEYIPNGTLFDHLHCDFTGKWPPLPWHLRLVIAHQIAEG 443
RL + D+ + + +Y+P H + P+ +++L + +Q+
Sbjct: 111 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPV-IYVKLYM-YQLFRS 168
Query: 444 LTYLHSAAVPPIYHRDVKSSNILLDEKLNA-KVSDFGLSRLVERTETNDSHIFTTAQGTM 502
L Y+HS I HRD+K N+LLD K+ DFG ++ + R E N S+I +
Sbjct: 169 LAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICS------ 219
Query: 503 GYLDPEYYRNFQL-------TDKSDVYSFGVVLLELL 532
YYR +L T DV+S G VL ELL
Sbjct: 220 -----RYYRAPELIFGATDYTSSIDVWSAGCVLAELL 251
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 96/208 (46%), Gaps = 30/208 (14%)
Query: 336 NLIGTGGFGEVFKGILDDG------TVTAIKRAKLGNTKGTDLVLNEVRILCQVNHRSLV 389
+++GTG F EV + +D + I + L +G+ + NE+ +L ++ H ++V
Sbjct: 24 DVLGTGAFSEVI--LAEDKRTQKLVAIKCIAKEALEGKEGS--MENEIAVLHKIKHPNIV 79
Query: 390 RLLGCCVELDQTLMIYEYIPNGTLFDHL--HCDFTGKWPPLPWHLRLVIAHQIAEGLTYL 447
L +I + + G LFD + +T + RL+ Q+ + + YL
Sbjct: 80 ALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDAS-----RLIF--QVLDAVKYL 132
Query: 448 HSAAVPPIYHRDVKSSNIL---LDEKLNAKVSDFGLSRLVERTETNDSHIFTTAQGTMGY 504
H I HRD+K N+L LDE +SDFGLS++ + + +TA GT GY
Sbjct: 133 HDLG---IVHRDLKPENLLYYSLDEDSKIMISDFGLSKM-----EDPGSVLSTACGTPGY 184
Query: 505 LDPEYYRNFQLTDKSDVYSFGVVLLELL 532
+ PE + D +S GV+ LL
Sbjct: 185 VAPEVLAQKPYSKAVDCWSIGVIAYILL 212
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 62/217 (28%), Positives = 106/217 (48%), Gaps = 35/217 (16%)
Query: 331 NFSKDNLIGTGGFGEVFKGIL-DDGTVTAIKRAKLGNTKGTDLVLNEVRILCQVNHRSLV 389
+++ +IG G FG V++ L D G + AIK+ L + + + E++I+ +++H ++V
Sbjct: 49 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV-LQDKRFKN---RELQIMRKLDHCNIV 104
Query: 390 RL----LGCCVELDQTLM--IYEYIPNGTLFDHLHCDFTGKWPPLPWHLRLVIAHQIAEG 443
RL + D+ + + +Y+P H + P+ +++L + +Q+
Sbjct: 105 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPV-IYVKLYM-YQLFRS 162
Query: 444 LTYLHSAAVPPIYHRDVKSSNILLDEKLNA-KVSDFGLSRLVERTETNDSHIFTTAQGTM 502
L Y+HS I HRD+K N+LLD K+ DFG ++ + R E N S+I +
Sbjct: 163 LAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICS------ 213
Query: 503 GYLDPEYYRNFQL-------TDKSDVYSFGVVLLELL 532
YYR +L T DV+S G VL ELL
Sbjct: 214 -----RYYRAPELIFGATDYTSSIDVWSAGCVLAELL 245
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 66/236 (27%), Positives = 102/236 (43%), Gaps = 27/236 (11%)
Query: 330 NNFSKDNLIGTGGFGEVFKGIL----DDGTVTAIKRAKLGNTKGTDLV---LNEVRILCQ 382
N+F L+G G FG+V IL G A+K + D V + E R+L
Sbjct: 5 NDFDYLKLLGKGTFGKV---ILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQN 61
Query: 383 VNHRSLVRLLGCCVELDQTLMIYEYIPNGTLFDHLHCD--FTGKWPPLPWHLRLVIAHQI 440
H L L D+ + EY G LF HL + FT + +I
Sbjct: 62 TRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARF-------YGAEI 114
Query: 441 AEGLTYLHSAAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDSHIFTTAQG 500
L YLHS V +RD+K N++LD+ + K++DFGL + +D T G
Sbjct: 115 VSALEYLHSRDV---VYRDIKLENLMLDKDGHIKITDFGLC----KEGISDGATMKTFCG 167
Query: 501 TMGYLDPEYYRNFQLTDKSDVYSFGVVLLELLTSKKAIDFNREEENVNLVVYMKKI 556
T YL PE + D + GVV+ E++ + +N++ E + ++ M++I
Sbjct: 168 TPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPF-YNQDHERLFELILMEEI 222
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 62/217 (28%), Positives = 106/217 (48%), Gaps = 35/217 (16%)
Query: 331 NFSKDNLIGTGGFGEVFKGIL-DDGTVTAIKRAKLGNTKGTDLVLNEVRILCQVNHRSLV 389
+++ +IG G FG V++ L D G + AIK+ L + + + E++I+ +++H ++V
Sbjct: 100 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV-LQDKRFKN---RELQIMRKLDHCNIV 155
Query: 390 RL----LGCCVELDQTLM--IYEYIPNGTLFDHLHCDFTGKWPPLPWHLRLVIAHQIAEG 443
RL + D+ + + +Y+P H + P+ +++L + +Q+
Sbjct: 156 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPV-IYVKLYM-YQLFRS 213
Query: 444 LTYLHSAAVPPIYHRDVKSSNILLDEKLNA-KVSDFGLSRLVERTETNDSHIFTTAQGTM 502
L Y+HS I HRD+K N+LLD K+ DFG ++ + R E N S+I +
Sbjct: 214 LAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICS------ 264
Query: 503 GYLDPEYYRNFQL-------TDKSDVYSFGVVLLELL 532
YYR +L T DV+S G VL ELL
Sbjct: 265 -----RYYRAPELIFGATDYTSSIDVWSAGCVLAELL 296
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 62/217 (28%), Positives = 106/217 (48%), Gaps = 35/217 (16%)
Query: 331 NFSKDNLIGTGGFGEVFKGIL-DDGTVTAIKRAKLGNTKGTDLVLNEVRILCQVNHRSLV 389
+++ +IG G FG V++ L D G + AIK+ L + + + E++I+ +++H ++V
Sbjct: 59 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV-LQDKRFKN---RELQIMRKLDHCNIV 114
Query: 390 RL----LGCCVELDQTLM--IYEYIPNGTLFDHLHCDFTGKWPPLPWHLRLVIAHQIAEG 443
RL + D+ + + +Y+P H + P+ +++L + +Q+
Sbjct: 115 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPV-IYVKLYM-YQLFRS 172
Query: 444 LTYLHSAAVPPIYHRDVKSSNILLDEKLNA-KVSDFGLSRLVERTETNDSHIFTTAQGTM 502
L Y+HS I HRD+K N+LLD K+ DFG ++ + R E N S+I +
Sbjct: 173 LAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICS------ 223
Query: 503 GYLDPEYYRNFQL-------TDKSDVYSFGVVLLELL 532
YYR +L T DV+S G VL ELL
Sbjct: 224 -----RYYRAPELIFGATDYTSSIDVWSAGCVLAELL 255
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 62/217 (28%), Positives = 103/217 (47%), Gaps = 35/217 (16%)
Query: 331 NFSKDNLIGTGGFGEVFKGIL-DDGTVTAIKRAKLGNTKGTDLVLNEVRILCQVNHRSLV 389
+++ +IG G FG V++ L D G + AIK+ +G E++I+ +++H ++V
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV----LQGKAFKNRELQIMRKLDHCNIV 76
Query: 390 RL----LGCCVELDQTLM--IYEYIPNGTLFDHLHCDFTGKWPPLPWHLRLVIAHQIAEG 443
RL + D+ + + +Y+P H + P+ +++L + +Q+
Sbjct: 77 RLRYFFYSSGEKKDEVYLNLVLDYVPATVYRVARHYSRAKQTLPV-IYVKLYM-YQLFRS 134
Query: 444 LTYLHSAAVPPIYHRDVKSSNILLDEKLNA-KVSDFGLSRLVERTETNDSHIFTTAQGTM 502
L Y+HS I HRD+K N+LLD K+ DFG ++ + R E N S I +
Sbjct: 135 LAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICS------ 185
Query: 503 GYLDPEYYRNFQL-------TDKSDVYSFGVVLLELL 532
YYR +L T DV+S G VL ELL
Sbjct: 186 -----RYYRAPELIFGATDYTSSIDVWSAGCVLAELL 217
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 62/217 (28%), Positives = 106/217 (48%), Gaps = 35/217 (16%)
Query: 331 NFSKDNLIGTGGFGEVFKGIL-DDGTVTAIKRAKLGNTKGTDLVLNEVRILCQVNHRSLV 389
+++ +IG G FG V++ L D G + AIK+ L + + + E++I+ +++H ++V
Sbjct: 26 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV-LQDKRFKN---RELQIMRKLDHCNIV 81
Query: 390 RL----LGCCVELDQTLM--IYEYIPNGTLFDHLHCDFTGKWPPLPWHLRLVIAHQIAEG 443
RL + D+ + + +Y+P H + P+ +++L + +Q+
Sbjct: 82 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPV-IYVKLYM-YQLFRS 139
Query: 444 LTYLHSAAVPPIYHRDVKSSNILLDEKLNA-KVSDFGLSRLVERTETNDSHIFTTAQGTM 502
L Y+HS I HRD+K N+LLD K+ DFG ++ + R E N S+I +
Sbjct: 140 LAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICS------ 190
Query: 503 GYLDPEYYRNFQL-------TDKSDVYSFGVVLLELL 532
YYR +L T DV+S G VL ELL
Sbjct: 191 -----RYYRAPELIFGATDYTSSIDVWSAGCVLAELL 222
>pdb|1TKI|A Chain A, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
pdb|1TKI|B Chain B, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
Length = 321
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 62/254 (24%), Positives = 122/254 (48%), Gaps = 30/254 (11%)
Query: 338 IGTGGFGEVFKGILDDGTVTAIKRAKLGNTKGTDLVL--NEVRILCQVNHRSLVRLLGCC 395
+G G FG V + + T + AK KGTD VL E+ IL HR+++ L
Sbjct: 13 LGRGEFGIVHRCVETSSKKTYM--AKFVKVKGTDQVLVKKEISILNIARHRNILHLHESF 70
Query: 396 VELDQTLMIYEYIPNGTLFDHLHCDFTGKWPPLPWHLRLVIA--HQIAEGLTYLHSAAVP 453
+++ +MI+E+I +F+ ++ + R +++ HQ+ E L +LHS +
Sbjct: 71 ESMEELVMIFEFISGLDIFERINT------SAFELNEREIVSYVHQVCEALQFLHSHNIG 124
Query: 454 PIYHRDVKSSNILLDEKLNA--KVSDFGLSRLVERTETNDSHIFTTAQGTMGYLDPEYYR 511
H D++ NI+ + ++ K+ +FG +R ++ + N +FT + Y PE ++
Sbjct: 125 ---HFDIRPENIIYQTRRSSTIKIIEFGQARQLKPGD-NFRLLFTAPE----YYAPEVHQ 176
Query: 512 NFQLTDKSDVYSFGVVLLELLTSKKAIDFNREEENVNLVVYMKKIMDEERLMEV------ 565
+ ++ +D++S G ++ LL+ ++ + ++ + DEE E+
Sbjct: 177 HDVVSTATDMWSLGTLVYVLLSGINPFLAETNQQIIENIMNAEYTFDEEAFKEISIEAMD 236
Query: 566 -VDPVL-KERATHL 577
VD +L KER + +
Sbjct: 237 FVDRLLVKERKSRM 250
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 66/238 (27%), Positives = 100/238 (42%), Gaps = 22/238 (9%)
Query: 326 RRATNNFSKDNLIGTGGFGEVFKGIL----DDGTVTAIKRAKLGNTKGTDLV---LNEVR 378
R N F L+G G FG+V IL G A+K K D V L E R
Sbjct: 144 RVTMNEFEYLKLLGKGTFGKV---ILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENR 200
Query: 379 ILCQVNHRSLVRLLGCCVELDQTLMIYEYIPNGTLFDHLHCDFTGKWPPLPWHLRLVIAH 438
+L H L L D+ + EY G LF HL + ++
Sbjct: 201 VLQNSRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFY-----GA 255
Query: 439 QIAEGLTYLHSAAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDSHIFTTA 498
+I L YLHS + +RD+K N++LD+ + K++DFGL + D T
Sbjct: 256 EIVSALDYLHSEK--NVVYRDLKLENLMLDKDGHIKITDFGLC----KEGIKDGATMKTF 309
Query: 499 QGTMGYLDPEYYRNFQLTDKSDVYSFGVVLLELLTSKKAIDFNREEENVNLVVYMKKI 556
GT YL PE + D + GVV+ E++ + +N++ E + ++ M++I
Sbjct: 310 CGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPF-YNQDHEKLFELILMEEI 366
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 53/213 (24%), Positives = 96/213 (45%), Gaps = 16/213 (7%)
Query: 327 RATNNFSKDNLIGTGGFGEVFK-GILDDGTVTAIKRAKLGNTKGT--DLVLNEVRILCQV 383
++ + L+G G +G V K D G + AIK+ + + + E+++L Q+
Sbjct: 22 QSMEKYENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQL 81
Query: 384 NHRSLVRLLGCCVELDQTLMIYEYIPNGTLFDHLHCDFTGKWPPLPWHLRLVIAHQIAEG 443
H +LV LL C + + +++E++ + T+ D L G L + + QI G
Sbjct: 82 RHENLVNLLEVCKKKKRWYLVFEFVDH-TILDDLELFPNG----LDYQVVQKYLFQIING 136
Query: 444 LTYLHSAAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDSHIFTTAQGTMG 503
+ + HS I HRD+K NIL+ + K+ DFG + RT ++ T
Sbjct: 137 IGFCHSHN---IIHRDIKPENILVSQSGVVKLCDFGFA----RTLAAPGEVYDDEVATRW 189
Query: 504 YLDPEYY-RNFQLTDKSDVYSFGVVLLELLTSK 535
Y PE + + DV++ G ++ E+ +
Sbjct: 190 YRAPELLVGDVKYGKAVDVWAIGCLVTEMFMGE 222
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 62/217 (28%), Positives = 106/217 (48%), Gaps = 35/217 (16%)
Query: 331 NFSKDNLIGTGGFGEVFKGIL-DDGTVTAIKRAKLGNTKGTDLVLNEVRILCQVNHRSLV 389
+++ +IG G FG V++ L D G + AIK+ L + + + E++I+ +++H ++V
Sbjct: 34 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV-LQDKRFKN---RELQIMRKLDHCNIV 89
Query: 390 RL----LGCCVELDQTLM--IYEYIPNGTLFDHLHCDFTGKWPPLPWHLRLVIAHQIAEG 443
RL + D+ + + +Y+P H + P+ +++L + +Q+
Sbjct: 90 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPV-IYVKLYM-YQLFRS 147
Query: 444 LTYLHSAAVPPIYHRDVKSSNILLDEKLNA-KVSDFGLSRLVERTETNDSHIFTTAQGTM 502
L Y+HS I HRD+K N+LLD K+ DFG ++ + R E N S+I +
Sbjct: 148 LAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICS------ 198
Query: 503 GYLDPEYYRNFQL-------TDKSDVYSFGVVLLELL 532
YYR +L T DV+S G VL ELL
Sbjct: 199 -----RYYRAPELIFGATDYTSSIDVWSAGCVLAELL 230
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 98/211 (46%), Gaps = 15/211 (7%)
Query: 330 NNFSKDNLIGTGGFGEVFK-GILDDGTVTAIKRAKLGNTKGT-DLVLNEVRILCQVNHRS 387
++F K + +G G G VFK G V A K L + ++ E+++L + N
Sbjct: 25 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPY 84
Query: 388 LVRLLGCCVELDQTLMIYEYIPNGTLFDHLHCDFTGKWPPLPWHLRLVIAHQIAEGLTYL 447
+V G + + E++ G+L L K +P + ++ + +GLTYL
Sbjct: 85 IVGFYGAFYSDGEISICMEHMDGGSLDQVLK-----KAGRIPEQILGKVSIAVIKGLTYL 139
Query: 448 HSAAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDSHIFTTAQGTMGYLDP 507
I HRDVK SNIL++ + K+ DFG+S + + N + GT Y+ P
Sbjct: 140 REKH--KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMAN------SFVGTRSYMSP 191
Query: 508 EYYRNFQLTDKSDVYSFGVVLLELLTSKKAI 538
E + + +SD++S G+ L+E+ + I
Sbjct: 192 ERLQGTHYSVQSDIWSMGLSLVEMAVGRYPI 222
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 92/214 (42%), Gaps = 19/214 (8%)
Query: 331 NFSKDNLIGTGGFGEV-FKGILDDGTVTAIK---RAKLGNTKGTDLVLNEVRILCQVNHR 386
N+ +G G FG+V G A+K + L + + E+ L + H
Sbjct: 5 NYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHP 64
Query: 387 SLVRLLGCCVELDQTLMIYEYIPNGTLFDHLHCDFTGKWPPLPWHLRLVIAHQIAEGLTY 446
+++L D+ +M+ EY N LFD++ + + QI + Y
Sbjct: 65 HIIKLYDVIKSKDEIIMVIEYAGN-ELFDYI-----VQRDKMSEQEARRFFQQIISAVEY 118
Query: 447 LHSAAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDSHIFTTAQGTMGYLD 506
H I HRD+K N+LLDE LN K++DFGLS ++ D + T+ G+ Y
Sbjct: 119 CHRHK---IVHRDLKPENLLLDEHLNVKIADFGLSNIM-----TDGNFLKTSCGSPNYAA 170
Query: 507 PEYYR-NFQLTDKSDVYSFGVVLLELLTSKKAID 539
PE + DV+S GV+L +L + D
Sbjct: 171 PEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFD 204
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 62/217 (28%), Positives = 106/217 (48%), Gaps = 35/217 (16%)
Query: 331 NFSKDNLIGTGGFGEVFKGIL-DDGTVTAIKRAKLGNTKGTDLVLNEVRILCQVNHRSLV 389
+++ +IG G FG V++ L D G + AIK+ L + + + E++I+ +++H ++V
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV-LQDKRFKN---RELQIMRKLDHCNIV 76
Query: 390 RL----LGCCVELDQTLM--IYEYIPNGTLFDHLHCDFTGKWPPLPWHLRLVIAHQIAEG 443
RL + D+ + + +Y+P H + P+ +++L + +Q+
Sbjct: 77 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPV-IYVKLYM-YQLFRS 134
Query: 444 LTYLHSAAVPPIYHRDVKSSNILLDEKLNA-KVSDFGLSRLVERTETNDSHIFTTAQGTM 502
L Y+HS I HRD+K N+LLD K+ DFG ++ + R E N S+I +
Sbjct: 135 LAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICS------ 185
Query: 503 GYLDPEYYRNFQL-------TDKSDVYSFGVVLLELL 532
YYR +L T DV+S G VL ELL
Sbjct: 186 -----RYYRAPELIFGATDYTSSIDVWSAGCVLAELL 217
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 104/218 (47%), Gaps = 31/218 (14%)
Query: 330 NNFSKDNLIGTGGFGEVFKGILD-DGTVTAIKRAKLGN-TKGT-DLVLNEVRILCQVNHR 386
NF K IG G +G V+K G V A+ + +L T+G + E+ +L ++NH
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 387 SLVRLLGCCVELDQTLMIYEYIPNGTLFDHLHCDFTGKWPPLPWHLRLVIAHQIAEGLTY 446
++V+LL ++ +++E++ TG PLP L Q+ +GL +
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGI--PLP--LIKSYLFQLLQGLAF 118
Query: 447 LHSAAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSR---LVERTETNDSHIFTTAQGTMG 503
HS V HRD+K N+L++ + K++DFGL+R + RT T++ T+
Sbjct: 119 CHSHRV---LHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEV-------VTLW 168
Query: 504 YLDPE------YYRNFQLTDKSDVYSFGVVLLELLTSK 535
Y PE YY + D++S G + E++T +
Sbjct: 169 YRAPEILLGCKYY-----STAVDIWSLGCIFAEMVTRR 201
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 104/218 (47%), Gaps = 31/218 (14%)
Query: 330 NNFSKDNLIGTGGFGEVFKGILD-DGTVTAIKRAKLGN-TKGT-DLVLNEVRILCQVNHR 386
NF K IG G +G V+K G V A+ + +L T+G + E+ +L ++NH
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 387 SLVRLLGCCVELDQTLMIYEYIPNGTLFDHLHCDFTGKWPPLPWHLRLVIAHQIAEGLTY 446
++V+LL ++ +++E++ TG PLP L Q+ +GL +
Sbjct: 62 NIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGI--PLP--LIKSYLFQLLQGLAF 117
Query: 447 LHSAAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSR---LVERTETNDSHIFTTAQGTMG 503
HS V HRD+K N+L++ + K++DFGL+R + RT T++ T+
Sbjct: 118 CHSHRV---LHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEV-------VTLW 167
Query: 504 YLDPE------YYRNFQLTDKSDVYSFGVVLLELLTSK 535
Y PE YY + D++S G + E++T +
Sbjct: 168 YRAPEILLGCKYY-----STAVDIWSLGCIFAEMVTRR 200
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 95/206 (46%), Gaps = 20/206 (9%)
Query: 337 LIGTGGFGEVFK----GILDDGTVTAIKRAK----LGNTKGTDLVLNEVRILCQVNHRSL 388
++G GG+G+VF+ + G + A+K K + N K T E IL +V H +
Sbjct: 24 VLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFI 83
Query: 389 VRLLGCCVELDQTLMIYEYIPNGTLFDHLHCDFTGKWPPLPWHLRLVIAHQIAEGLTYLH 448
V L+ + +I EY+ G LF L + ++L +I+ L +LH
Sbjct: 84 VDLIYAFQTGGKLYLILEYLSGGELFMQLEREGIFMEDTACFYLA-----EISMALGHLH 138
Query: 449 SAAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDSHIFTTAQGTMGYLDPE 508
I +RD+K NI+L+ + + K++DFGL + +D + T GT+ Y+ PE
Sbjct: 139 QKG---IIYRDLKPENIMLNHQGHVKLTDFGLC----KESIHDGTVTHTFCGTIEYMAPE 191
Query: 509 YYRNFQLTDKSDVYSFGVVLLELLTS 534
D +S G ++ ++LT
Sbjct: 192 ILMRSGHNRAVDWWSLGALMYDMLTG 217
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 92/214 (42%), Gaps = 19/214 (8%)
Query: 331 NFSKDNLIGTGGFGEV-FKGILDDGTVTAIK---RAKLGNTKGTDLVLNEVRILCQVNHR 386
N+ +G G FG+V G A+K + L + + E+ L + H
Sbjct: 15 NYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHP 74
Query: 387 SLVRLLGCCVELDQTLMIYEYIPNGTLFDHLHCDFTGKWPPLPWHLRLVIAHQIAEGLTY 446
+++L D+ +M+ EY N LFD++ + + QI + Y
Sbjct: 75 HIIKLYDVIKSKDEIIMVIEYAGN-ELFDYI-----VQRDKMSEQEARRFFQQIISAVEY 128
Query: 447 LHSAAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDSHIFTTAQGTMGYLD 506
H I HRD+K N+LLDE LN K++DFGLS ++ D + T+ G+ Y
Sbjct: 129 CHRHK---IVHRDLKPENLLLDEHLNVKIADFGLSNIM-----TDGNFLKTSCGSPNYAA 180
Query: 507 PEYYR-NFQLTDKSDVYSFGVVLLELLTSKKAID 539
PE + DV+S GV+L +L + D
Sbjct: 181 PEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFD 214
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 92/214 (42%), Gaps = 19/214 (8%)
Query: 331 NFSKDNLIGTGGFGEV-FKGILDDGTVTAIK---RAKLGNTKGTDLVLNEVRILCQVNHR 386
N+ +G G FG+V G A+K + L + + E+ L + H
Sbjct: 14 NYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHP 73
Query: 387 SLVRLLGCCVELDQTLMIYEYIPNGTLFDHLHCDFTGKWPPLPWHLRLVIAHQIAEGLTY 446
+++L D+ +M+ EY N LFD++ + + QI + Y
Sbjct: 74 HIIKLYDVIKSKDEIIMVIEYAGN-ELFDYI-----VQRDKMSEQEARRFFQQIISAVEY 127
Query: 447 LHSAAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDSHIFTTAQGTMGYLD 506
H I HRD+K N+LLDE LN K++DFGLS ++ D + T+ G+ Y
Sbjct: 128 CHRHK---IVHRDLKPENLLLDEHLNVKIADFGLSNIM-----TDGNFLKTSCGSPNYAA 179
Query: 507 PEYYR-NFQLTDKSDVYSFGVVLLELLTSKKAID 539
PE + DV+S GV+L +L + D
Sbjct: 180 PEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFD 213
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 92/214 (42%), Gaps = 19/214 (8%)
Query: 331 NFSKDNLIGTGGFGEV-FKGILDDGTVTAIK---RAKLGNTKGTDLVLNEVRILCQVNHR 386
N+ +G G FG+V G A+K + L + + E+ L + H
Sbjct: 9 NYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHP 68
Query: 387 SLVRLLGCCVELDQTLMIYEYIPNGTLFDHLHCDFTGKWPPLPWHLRLVIAHQIAEGLTY 446
+++L D+ +M+ EY N LFD++ + + QI + Y
Sbjct: 69 HIIKLYDVIKSKDEIIMVIEYAGN-ELFDYI-----VQRDKMSEQEARRFFQQIISAVEY 122
Query: 447 LHSAAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDSHIFTTAQGTMGYLD 506
H I HRD+K N+LLDE LN K++DFGLS ++ D + T+ G+ Y
Sbjct: 123 CHRHK---IVHRDLKPENLLLDEHLNVKIADFGLSNIM-----TDGNFLKTSCGSPNYAA 174
Query: 507 PEYYR-NFQLTDKSDVYSFGVVLLELLTSKKAID 539
PE + DV+S GV+L +L + D
Sbjct: 175 PEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFD 208
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 97/208 (46%), Gaps = 15/208 (7%)
Query: 330 NNFSKDNLIGTGGFGEVFK-GILDDGTVTAIKRAKLGNTKGT-DLVLNEVRILCQVNHRS 387
++F K + +G G G VFK G V A K L + ++ E+++L + N
Sbjct: 9 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPY 68
Query: 388 LVRLLGCCVELDQTLMIYEYIPNGTLFDHLHCDFTGKWPPLPWHLRLVIAHQIAEGLTYL 447
+V G + + E++ G+L L K +P + ++ + +GLTYL
Sbjct: 69 IVGFYGAFYSDGEISICMEHMDGGSLDQVLK-----KAGRIPEQILGKVSIAVIKGLTYL 123
Query: 448 HSAAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDSHIFTTAQGTMGYLDP 507
I HRDVK SNIL++ + K+ DFG+S + N+ F GT Y+ P
Sbjct: 124 REKH--KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDEMANE---FV---GTRSYMSP 175
Query: 508 EYYRNFQLTDKSDVYSFGVVLLELLTSK 535
E + + +SD++S G+ L+E+ +
Sbjct: 176 ERLQGTHYSVQSDIWSMGLSLVEMAVGR 203
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 62/234 (26%), Positives = 100/234 (42%), Gaps = 23/234 (9%)
Query: 328 ATNNFSKDNLIGTGGFGEVFKGI-LDDGTVTAIKRAKLGN-TKGTDL-VLNEVRILCQVN 384
AT+ + IG G +G V+K G A+K ++ N +G + + EV +L ++
Sbjct: 2 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLE 61
Query: 385 ---HRSLVRLLGCCVELDQTLMIYEYIPNGTLFDHLHCD---FTGKWPP--LPWHLRLVI 436
H ++VRL+ C T I +F+H+ D + K PP LP +
Sbjct: 62 AFEHPNVVRLMDVCA----TSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDL 117
Query: 437 AHQIAEGLTYLHSAAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDSHIFT 496
Q GL +LH+ I HRD+K NIL+ K++DFGL+R+ D +
Sbjct: 118 MRQFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIYSYQMALDPVVV- 173
Query: 497 TAQGTMGYLDPEYYRNFQLTDKSDVYSFGVVLLELLTSKKAIDFNREEENVNLV 550
T+ Y PE D++S G + E+ K N E + + +
Sbjct: 174 ----TLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKI 223
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 62/217 (28%), Positives = 105/217 (48%), Gaps = 35/217 (16%)
Query: 331 NFSKDNLIGTGGFGEVFKGIL-DDGTVTAIKRAKLGNTKGTDLVLNEVRILCQVNHRSLV 389
+++ +IG G FG V++ L D G + AIK+ L + + + E++I+ +++H ++V
Sbjct: 55 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV-LQDKRFKN---RELQIMRKLDHCNIV 110
Query: 390 RL----LGCCVELDQTLM--IYEYIPNGTLFDHLHCDFTGKWPPLPWHLRLVIAHQIAEG 443
RL + D+ + + +Y+P H + P+ +++L + +Q+
Sbjct: 111 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPV-IYVKLYM-YQLFRS 168
Query: 444 LTYLHSAAVPPIYHRDVKSSNILLDEKLNA-KVSDFGLSRLVERTETNDSHIFTTAQGTM 502
L Y+HS I HRD+K N+LLD K+ DFG ++ + R E N S I +
Sbjct: 169 LAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICS------ 219
Query: 503 GYLDPEYYRNFQL-------TDKSDVYSFGVVLLELL 532
YYR +L T DV+S G VL ELL
Sbjct: 220 -----RYYRAPELIFGATDYTSSIDVWSAGCVLAELL 251
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 62/222 (27%), Positives = 97/222 (43%), Gaps = 26/222 (11%)
Query: 327 RATNNFSKDNLIGTGGFGEVFKG--ILDDGTVTAIKRAKLGN-TKGTDL-VLNEVRILCQ 382
RA + IG G +G+VFK + + G A+KR ++ +G L + EV +L
Sbjct: 8 RADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRH 67
Query: 383 VN---HRSLVRLLGCCVELDQTLMIYEYIPNGTL-FDHLHCDFTGKW-----PPLPWHLR 433
+ H ++VRL C T+ + TL F+H+ D T P +P
Sbjct: 68 LETFEHPNVVRLFDVC-----TVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETI 122
Query: 434 LVIAHQIAEGLTYLHSAAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDSH 493
+ Q+ GL +LHS V HRD+K NIL+ K++DFGL+R+ +
Sbjct: 123 KDMMFQLLRGLDFLHSHRV---VHRDLKPQNILVTSSGQIKLADFGLARIY-----SFQM 174
Query: 494 IFTTAQGTMGYLDPEYYRNFQLTDKSDVYSFGVVLLELLTSK 535
T+ T+ Y PE D++S G + E+ K
Sbjct: 175 ALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRK 216
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 95/205 (46%), Gaps = 17/205 (8%)
Query: 338 IGTGGFGEVFKGI--LDDGTVTAIKRAKLGNTKGTDLVLNEVRILCQVNHRSLVRL---- 391
IG G +G V L+ V K + + L E++IL + H +++ +
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 94
Query: 392 LGCCVELDQTLMIYEYIPNGTLFDHLHCDFTGKWPPLPWHLRLVIAHQIAEGLTYLHSAA 451
+E + + I + + L+ L C H+ +QI GL Y+HSA
Sbjct: 95 RAPTIEQMKDVYIVQDLMETDLYKLLKCQHLSND-----HI-CYFLYQILRGLKYIHSAN 148
Query: 452 VPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDSHIFTTAQGTMGYLDPEYYR 511
V HRD+K SN+LL+ + K+ DFGL+R+ + + + + T T Y PE
Sbjct: 149 V---LHRDLKPSNLLLNTTCDLKICDFGLARVAD-PDHDHTGFLTEYVATRWYRAPEIML 204
Query: 512 NFQLTDKS-DVYSFGVVLLELLTSK 535
N + KS D++S G +L E+L+++
Sbjct: 205 NSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 62/217 (28%), Positives = 105/217 (48%), Gaps = 35/217 (16%)
Query: 331 NFSKDNLIGTGGFGEVFKGIL-DDGTVTAIKRAKLGNTKGTDLVLNEVRILCQVNHRSLV 389
+++ +IG G FG V++ L D G + AIK+ L + + + E++I+ +++H ++V
Sbjct: 33 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV-LQDKRFKN---RELQIMRKLDHCNIV 88
Query: 390 RL----LGCCVELDQTLM--IYEYIPNGTLFDHLHCDFTGKWPPLPWHLRLVIAHQIAEG 443
RL + D+ + + +Y+P H + P+ +++L + +Q+
Sbjct: 89 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPV-IYVKLYM-YQLFRS 146
Query: 444 LTYLHSAAVPPIYHRDVKSSNILLDEKLNA-KVSDFGLSRLVERTETNDSHIFTTAQGTM 502
L Y+HS I HRD+K N+LLD K+ DFG ++ + R E N S I +
Sbjct: 147 LAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICS------ 197
Query: 503 GYLDPEYYRNFQL-------TDKSDVYSFGVVLLELL 532
YYR +L T DV+S G VL ELL
Sbjct: 198 -----RYYRAPELIFGATDYTSSIDVWSAGCVLAELL 229
>pdb|2QLU|A Chain A, Crystal Structure Of Activin Receptor Type Ii Kinase
Domain From Human
Length = 314
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 49/151 (32%), Positives = 72/151 (47%), Gaps = 23/151 (15%)
Query: 403 MIYEYIPNGTLFDHLHCDFTGKWPPLPWHLRLVIAHQIAEGLTYLHS--------AAVPP 454
+I + G+L D+L + + W+ +A ++ GL+YLH P
Sbjct: 90 LITAFHDKGSLTDYLKGNI------ITWNELCHVAETMSRGLSYLHEDVPWCRGEGHKPS 143
Query: 455 IYHRDVKSSNILLDEKLNAKVSDFGLS-RLVERTETNDSHIFTTAQGTMGYLDPEYYR-- 511
I HRD KS N+LL L A ++DFGL+ R D+H GT Y+ PE
Sbjct: 144 IAHRDFKSKNVLLKSDLTAVLADFGLAVRFEPGKPPGDTH---GQVGTRRYMAPEVLEGA 200
Query: 512 -NFQLTD--KSDVYSFGVVLLELLTSKKAID 539
NFQ + D+Y+ G+VL EL++ KA D
Sbjct: 201 INFQRDAFLRIDMYAMGLVLWELVSRCKAAD 231
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 62/222 (27%), Positives = 97/222 (43%), Gaps = 26/222 (11%)
Query: 327 RATNNFSKDNLIGTGGFGEVFKG--ILDDGTVTAIKRAKLGN-TKGTDL-VLNEVRILCQ 382
RA + IG G +G+VFK + + G A+KR ++ +G L + EV +L
Sbjct: 8 RADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRH 67
Query: 383 VN---HRSLVRLLGCCVELDQTLMIYEYIPNGTL-FDHLHCDFTGKW-----PPLPWHLR 433
+ H ++VRL C T+ + TL F+H+ D T P +P
Sbjct: 68 LETFEHPNVVRLFDVC-----TVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETI 122
Query: 434 LVIAHQIAEGLTYLHSAAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDSH 493
+ Q+ GL +LHS V HRD+K NIL+ K++DFGL+R+ +
Sbjct: 123 KDMMFQLLRGLDFLHSHRV---VHRDLKPQNILVTSSGQIKLADFGLARIY-----SFQM 174
Query: 494 IFTTAQGTMGYLDPEYYRNFQLTDKSDVYSFGVVLLELLTSK 535
T+ T+ Y PE D++S G + E+ K
Sbjct: 175 ALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRK 216
>pdb|3MDY|A Chain A, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
pdb|3MDY|C Chain C, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
Length = 337
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 100/211 (47%), Gaps = 27/211 (12%)
Query: 338 IGTGGFGEVFKGILDDGTVTAIKRAKLGNTKGTDLVLNEVRILCQVNHRSLVRLLGCCVE 397
IG G +GEV+ G G A+K + + E+ + H +++ + ++
Sbjct: 45 IGKGRYGEVWMGKWR-GEKVAVK-VFFTTEEASWFRETEIYQTVLMRHENILGFIAADIK 102
Query: 398 ----LDQTLMIYEYIPNGTLFDHLHCDFTGKWPPLPWHLRLVIAHQIAEGLTYLHSAAV- 452
Q +I +Y NG+L+D+L K L L +A+ GL +LH+
Sbjct: 103 GTGSWTQLYLITDYHENGSLYDYL------KSTTLDAKSMLKLAYSSVSGLCHLHTEIFS 156
Query: 453 ----PPIYHRDVKSSNILLDEKLNAKVSDFGLS-RLVERTETNDSHI-FTTAQGTMGYLD 506
P I HRD+KS NIL+ + ++D GL+ + + ++TN+ I T GT Y+
Sbjct: 157 TQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVKFI--SDTNEVDIPPNTRVGTKRYMP 214
Query: 507 PEYY-----RN-FQLTDKSDVYSFGVVLLEL 531
PE RN FQ +D+YSFG++L E+
Sbjct: 215 PEVLDESLNRNHFQSYIMADMYSFGLILWEV 245
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 62/217 (28%), Positives = 105/217 (48%), Gaps = 35/217 (16%)
Query: 331 NFSKDNLIGTGGFGEVFKGIL-DDGTVTAIKRAKLGNTKGTDLVLNEVRILCQVNHRSLV 389
+++ +IG G FG V++ L D G + AIK+ L + + + E++I+ +++H ++V
Sbjct: 40 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV-LQDKRFKN---RELQIMRKLDHCNIV 95
Query: 390 RL----LGCCVELDQTLM--IYEYIPNGTLFDHLHCDFTGKWPPLPWHLRLVIAHQIAEG 443
RL + D+ + + +Y+P H + P+ +++L + +Q+
Sbjct: 96 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPV-IYVKLYM-YQLFRS 153
Query: 444 LTYLHSAAVPPIYHRDVKSSNILLDEKLNA-KVSDFGLSRLVERTETNDSHIFTTAQGTM 502
L Y+HS I HRD+K N+LLD K+ DFG ++ + R E N S I +
Sbjct: 154 LAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICS------ 204
Query: 503 GYLDPEYYRNFQL-------TDKSDVYSFGVVLLELL 532
YYR +L T DV+S G VL ELL
Sbjct: 205 -----RYYRAPELIFGATDYTSSIDVWSAGCVLAELL 236
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 62/217 (28%), Positives = 105/217 (48%), Gaps = 35/217 (16%)
Query: 331 NFSKDNLIGTGGFGEVFKGIL-DDGTVTAIKRAKLGNTKGTDLVLNEVRILCQVNHRSLV 389
+++ +IG G FG V++ L D G + AIK+ L + + + E++I+ +++H ++V
Sbjct: 29 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV-LQDKRFKN---RELQIMRKLDHCNIV 84
Query: 390 RL----LGCCVELDQTLM--IYEYIPNGTLFDHLHCDFTGKWPPLPWHLRLVIAHQIAEG 443
RL + D+ + + +Y+P H + P+ +++L + +Q+
Sbjct: 85 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPV-IYVKLYM-YQLFRS 142
Query: 444 LTYLHSAAVPPIYHRDVKSSNILLDEKLNA-KVSDFGLSRLVERTETNDSHIFTTAQGTM 502
L Y+HS I HRD+K N+LLD K+ DFG ++ + R E N S I +
Sbjct: 143 LAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICS------ 193
Query: 503 GYLDPEYYRNFQL-------TDKSDVYSFGVVLLELL 532
YYR +L T DV+S G VL ELL
Sbjct: 194 -----RYYRAPELIFGATDYTSSIDVWSAGCVLAELL 225
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 62/217 (28%), Positives = 105/217 (48%), Gaps = 35/217 (16%)
Query: 331 NFSKDNLIGTGGFGEVFKGIL-DDGTVTAIKRAKLGNTKGTDLVLNEVRILCQVNHRSLV 389
+++ +IG G FG V++ L D G + AIK+ L + + + E++I+ +++H ++V
Sbjct: 33 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV-LQDKRFKN---RELQIMRKLDHCNIV 88
Query: 390 RL----LGCCVELDQTLM--IYEYIPNGTLFDHLHCDFTGKWPPLPWHLRLVIAHQIAEG 443
RL + D+ + + +Y+P H + P+ +++L + +Q+
Sbjct: 89 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPV-IYVKLYM-YQLFRS 146
Query: 444 LTYLHSAAVPPIYHRDVKSSNILLDEKLNA-KVSDFGLSRLVERTETNDSHIFTTAQGTM 502
L Y+HS I HRD+K N+LLD K+ DFG ++ + R E N S I +
Sbjct: 147 LAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICS------ 197
Query: 503 GYLDPEYYRNFQL-------TDKSDVYSFGVVLLELL 532
YYR +L T DV+S G VL ELL
Sbjct: 198 -----RYYRAPELIFGATDYTSSIDVWSAGCVLAELL 229
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 67/236 (28%), Positives = 103/236 (43%), Gaps = 27/236 (11%)
Query: 330 NNFSKDNLIGTGGFGEVFKGIL----DDGTVTAIKRAKLGNTKGTDLV---LNEVRILCQ 382
N+F L+G G FG+V IL G A+K + D V + E R+L
Sbjct: 10 NDFDYLKLLGKGTFGKV---ILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQN 66
Query: 383 VNHRSLVRLLGCCVELDQTLMIYEYIPNGTLFDHLHCD--FTGKWPPLPWHLRLVIAHQI 440
H L L D+ + EY G LF HL + FT + R A +I
Sbjct: 67 TRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEE------RARFYGA-EI 119
Query: 441 AEGLTYLHSAAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDSHIFTTAQG 500
L YLHS V +RD+K N++LD+ + K++DFGL + +D G
Sbjct: 120 VSALEYLHSRDV---VYRDIKLENLMLDKDGHIKITDFGLC----KEGISDGATMKXFCG 172
Query: 501 TMGYLDPEYYRNFQLTDKSDVYSFGVVLLELLTSKKAIDFNREEENVNLVVYMKKI 556
T YL PE + D + GVV+ E++ + +N++ E + ++ M++I
Sbjct: 173 TPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPF-YNQDHERLFELILMEEI 227
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 62/222 (27%), Positives = 97/222 (43%), Gaps = 26/222 (11%)
Query: 327 RATNNFSKDNLIGTGGFGEVFKG--ILDDGTVTAIKRAKLGN-TKGTDL-VLNEVRILCQ 382
RA + IG G +G+VFK + + G A+KR ++ +G L + EV +L
Sbjct: 8 RADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRH 67
Query: 383 VN---HRSLVRLLGCCVELDQTLMIYEYIPNGTL-FDHLHCDFTGKW-----PPLPWHLR 433
+ H ++VRL C T+ + TL F+H+ D T P +P
Sbjct: 68 LETFEHPNVVRLFDVC-----TVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETI 122
Query: 434 LVIAHQIAEGLTYLHSAAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDSH 493
+ Q+ GL +LHS V HRD+K NIL+ K++DFGL+R+ +
Sbjct: 123 KDMMFQLLRGLDFLHSHRV---VHRDLKPQNILVTSSGQIKLADFGLARIY-----SFQM 174
Query: 494 IFTTAQGTMGYLDPEYYRNFQLTDKSDVYSFGVVLLELLTSK 535
T+ T+ Y PE D++S G + E+ K
Sbjct: 175 ALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRK 216
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 58/201 (28%), Positives = 97/201 (48%), Gaps = 24/201 (11%)
Query: 341 GGFGEVFKGILDDGTVTAIKRAKLGNTKGTDLV---LNEVRILCQVNHRSLVRLLGCCVE 397
G FG+V+K + +V A AK+ +TK + + + E+ IL +H ++V+LL
Sbjct: 21 GDFGKVYKAQNKETSVLA--AAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYY 78
Query: 398 LDQTLMIYEYIPNGTLFDHLHCDFTGKWPPLPWHLRLVIAHQIAEGLTYLHSAAVPPIYH 457
+ ++ E+ G + D + + PL V+ Q + L YLH I H
Sbjct: 79 ENNLWILIEFCAGGAV-DAVMLELER---PLTESQIQVVCKQTLDALNYLHDNK---IIH 131
Query: 458 RDVKSSNILLDEKLNAKVSDFGLSRLVERT--ETNDSHIFTTAQGTMGYLDPEYY----- 510
RD+K+ NIL + K++DFG+S RT + DS I GT ++ PE
Sbjct: 132 RDLKAGNILFTLDGDIKLADFGVSAKNTRTXIQRRDSFI-----GTPYWMAPEVVMCETS 186
Query: 511 RNFQLTDKSDVYSFGVVLLEL 531
++ K+DV+S G+ L+E+
Sbjct: 187 KDRPYDYKADVWSLGITLIEM 207
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 99/206 (48%), Gaps = 29/206 (14%)
Query: 338 IGTGGFGEVFKGILDDGTVTAIKRAKLGNTKGTDLV---LNEVRILCQVNHRSLVRLLGC 394
+G G FG+V+K + +V A AK+ +TK + + + E+ IL +H ++V+LL
Sbjct: 45 LGDGAFGKVYKAQNKETSVLA--AAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDA 102
Query: 395 CVELDQTLMIYEYIPNGTLFDHLHCDFTGKWPPLPWHLRLVIAHQIAEGLTYLHSAAVPP 454
+ ++ E+ G + D + + PL V+ Q + L YLH
Sbjct: 103 FYYENNLWILIEFCAGGAV-DAVMLELER---PLTESQIQVVCKQTLDALNYLHDNK--- 155
Query: 455 IYHRDVKSSNILLDEKLNAKVSDFGLS----RLVERTETNDSHIFTTAQGTMGYLDPEYY 510
I HRD+K+ NIL + K++DFG+S R ++R D I GT ++ PE
Sbjct: 156 IIHRDLKAGNILFTLDGDIKLADFGVSAKNTRXIQR---RDXFI-----GTPYWMAPEVV 207
Query: 511 -----RNFQLTDKSDVYSFGVVLLEL 531
++ K+DV+S G+ L+E+
Sbjct: 208 MCETSKDRPYDYKADVWSLGITLIEM 233
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 66/242 (27%), Positives = 100/242 (41%), Gaps = 22/242 (9%)
Query: 322 GKEIRRATNNFSKDNLIGTGGFGEVFKGIL----DDGTVTAIKRAKLGNTKGTDLV---L 374
G R N F L+G G FG+V IL G A+K K D V L
Sbjct: 1 GAMARVTMNEFEYLKLLGKGTFGKV---ILVKEKATGRYYAMKILKKEVIVAKDEVAHTL 57
Query: 375 NEVRILCQVNHRSLVRLLGCCVELDQTLMIYEYIPNGTLFDHLHCDFTGKWPPLPWHLRL 434
E R+L H L L D+ + EY G LF HL + ++
Sbjct: 58 TENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFY--- 114
Query: 435 VIAHQIAEGLTYLHSAAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDSHI 494
+I L YLHS + +RD+K N++LD+ + K++DFGL + D
Sbjct: 115 --GAEIVSALDYLHSEK--NVVYRDLKLENLMLDKDGHIKITDFGLC----KEGIKDGAT 166
Query: 495 FTTAQGTMGYLDPEYYRNFQLTDKSDVYSFGVVLLELLTSKKAIDFNREEENVNLVVYMK 554
GT YL PE + D + GVV+ E++ + +N++ E + ++ M+
Sbjct: 167 MKXFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPF-YNQDHEKLFELILME 225
Query: 555 KI 556
+I
Sbjct: 226 EI 227
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 63/237 (26%), Positives = 98/237 (41%), Gaps = 26/237 (10%)
Query: 328 ATNNFSKDNLIGTGGFGEVFKGI-LDDGTVTAIKRAKLGNTKGTDLVL-----NEVRILC 381
AT+ + IG G +G V+K G A+K ++ N G L EV +L
Sbjct: 7 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLR 66
Query: 382 QVN---HRSLVRLLGCCVELDQTLMIYEYIPNGTLFDHLHCD---FTGKWPP--LPWHLR 433
++ H ++VRL+ C T I +F+H+ D + K PP LP
Sbjct: 67 RLEAFEHPNVVRLMDVCA----TSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETI 122
Query: 434 LVIAHQIAEGLTYLHSAAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDSH 493
+ Q GL +LH+ I HRD+K NIL+ K++DFGL+R+ +
Sbjct: 123 KDLMRQFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIY-----SYQM 174
Query: 494 IFTTAQGTMGYLDPEYYRNFQLTDKSDVYSFGVVLLELLTSKKAIDFNREEENVNLV 550
T T+ Y PE D++S G + E+ K N E + + +
Sbjct: 175 ALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKI 231
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 62/217 (28%), Positives = 105/217 (48%), Gaps = 35/217 (16%)
Query: 331 NFSKDNLIGTGGFGEVFKGIL-DDGTVTAIKRAKLGNTKGTDLVLNEVRILCQVNHRSLV 389
+++ +IG G FG V++ L D G + AIK+ L + + + E++I+ +++H ++V
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV-LQDKRFKN---RELQIMRKLDHCNIV 76
Query: 390 RL----LGCCVELDQTLM--IYEYIPNGTLFDHLHCDFTGKWPPLPWHLRLVIAHQIAEG 443
RL + D+ + + +Y+P H + P+ +++L + +Q+
Sbjct: 77 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPV-IYVKLYM-YQLFRS 134
Query: 444 LTYLHSAAVPPIYHRDVKSSNILLDEKLNA-KVSDFGLSRLVERTETNDSHIFTTAQGTM 502
L Y+HS I HRD+K N+LLD K+ DFG ++ + R E N S I +
Sbjct: 135 LAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICS------ 185
Query: 503 GYLDPEYYRNFQL-------TDKSDVYSFGVVLLELL 532
YYR +L T DV+S G VL ELL
Sbjct: 186 -----RYYRAPELIFGATDYTSSIDVWSAGCVLAELL 217
>pdb|3RP9|A Chain A, Crystal Structure Of The Apo Mapk From Toxoplasma Gondii,
25.M01780 Or Tgme49_007820
Length = 458
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 65/261 (24%), Positives = 115/261 (44%), Gaps = 40/261 (15%)
Query: 302 KQREEMLNAKAAGKSARIFTGKEIRRATNNFSKDNLIGTGGFGEVFKGILD-DGTVTAIK 360
+QR++ ++K R + +I + + +LIGTG +G V + + V AIK
Sbjct: 28 QQRKQHHSSKPTASMPRPHSDWQI---PDRYEIRHLIGTGSYGHVCEAYDKLEKRVVAIK 84
Query: 361 R--AKLGNTKGTDLVLNEVRILCQVNHRSLVRLLGCCVELDQTLMIYEYIPNGTLFDHLH 418
+ + +L E+ IL ++NH +V++L + D Y+ + +
Sbjct: 85 KILRVFEDLIDCKRILREIAILNRLNHDHVVKVLDIVIPKDVEKFDELYV----VLEIAD 140
Query: 419 CDFTG--KWPPLPWHLRL-VIAHQIAEGLTYLHSAAVPPIYHRDVKSSNILLDEKLNAKV 475
DF + P L + + + + G+ Y+HSA I HRD+K +N L+++ + KV
Sbjct: 141 SDFKKLFRTPVYLTELHIKTLLYNLLVGVKYVHSAG---ILHRDLKPANCLVNQDCSVKV 197
Query: 476 SDFGLSRLVERTETNDS-----------------HIFTTAQGTMGYLDPEYYRNFQL--- 515
DFGL+R V+ E +S H + G++ +YR +L
Sbjct: 198 CDFGLARTVDYPENGNSQLPISPREDDMNLVTFPHTKNLKRQLTGHVVTRWYRAPELILL 257
Query: 516 ----TDKSDVYSFGVVLLELL 532
T+ DV+S G + ELL
Sbjct: 258 QENYTEAIDVWSIGCIFAELL 278
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 62/217 (28%), Positives = 105/217 (48%), Gaps = 35/217 (16%)
Query: 331 NFSKDNLIGTGGFGEVFKGIL-DDGTVTAIKRAKLGNTKGTDLVLNEVRILCQVNHRSLV 389
+++ +IG G FG V++ L D G + AIK+ L + + + E++I+ +++H ++V
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV-LQDKRFKN---RELQIMRKLDHCNIV 76
Query: 390 RLL------GCCVELDQTLMIYEYIPNGTLFDHLHCDFTGKWPPLPWHLRLVIAHQIAEG 443
RL G ++ ++ +Y+P H + P+ +++L + +Q+
Sbjct: 77 RLRYFFYSSGEKKDVVYLNLVLDYVPETVYRVARHYSRAKQTLPV-IYVKLYM-YQLFRS 134
Query: 444 LTYLHSAAVPPIYHRDVKSSNILLDEKLNA-KVSDFGLSRLVERTETNDSHIFTTAQGTM 502
L Y+HS I HRD+K N+LLD K+ DFG ++ + R E N S I +
Sbjct: 135 LAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICS------ 185
Query: 503 GYLDPEYYRNFQL-------TDKSDVYSFGVVLLELL 532
YYR +L T DV+S G VL ELL
Sbjct: 186 -----RYYRAPELIFGATDYTSSIDVWSAGCVLAELL 217
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 65/236 (27%), Positives = 101/236 (42%), Gaps = 27/236 (11%)
Query: 330 NNFSKDNLIGTGGFGEVFKGIL----DDGTVTAIKRAKLGNTKGTDLV---LNEVRILCQ 382
N+F L+G G FG+V IL G A+K + D V + E R+L
Sbjct: 5 NDFDYLKLLGKGTFGKV---ILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQN 61
Query: 383 VNHRSLVRLLGCCVELDQTLMIYEYIPNGTLFDHLHCD--FTGKWPPLPWHLRLVIAHQI 440
H L L D+ + EY G LF HL + FT + +I
Sbjct: 62 TRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARF-------YGAEI 114
Query: 441 AEGLTYLHSAAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDSHIFTTAQG 500
L YLHS V +RD+K N++LD+ + K++DFGL + +D G
Sbjct: 115 VSALEYLHSRDV---VYRDIKLENLMLDKDGHIKITDFGLC----KEGISDGATMKXFCG 167
Query: 501 TMGYLDPEYYRNFQLTDKSDVYSFGVVLLELLTSKKAIDFNREEENVNLVVYMKKI 556
T YL PE + D + GVV+ E++ + +N++ E + ++ M++I
Sbjct: 168 TPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPF-YNQDHERLFELILMEEI 222
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 62/217 (28%), Positives = 105/217 (48%), Gaps = 35/217 (16%)
Query: 331 NFSKDNLIGTGGFGEVFKGIL-DDGTVTAIKRAKLGNTKGTDLVLNEVRILCQVNHRSLV 389
+++ +IG G FG V++ L D G + AIK+ L + + + E++I+ +++H ++V
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV-LQDKRFKN---RELQIMRKLDHCNIV 76
Query: 390 RL----LGCCVELDQTLM--IYEYIPNGTLFDHLHCDFTGKWPPLPWHLRLVIAHQIAEG 443
RL + D+ + + +Y+P H + P+ +++L + +Q+
Sbjct: 77 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPV-IYVKLYM-YQLFRS 134
Query: 444 LTYLHSAAVPPIYHRDVKSSNILLDEKLNA-KVSDFGLSRLVERTETNDSHIFTTAQGTM 502
L Y+HS I HRD+K N+LLD K+ DFG ++ + R E N S I +
Sbjct: 135 LAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICS------ 185
Query: 503 GYLDPEYYRNFQL-------TDKSDVYSFGVVLLELL 532
YYR +L T DV+S G VL ELL
Sbjct: 186 -----RYYRAPELIFGATDYTSSIDVWSAGCVLAELL 217
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 92/214 (42%), Gaps = 29/214 (13%)
Query: 326 RRATNNFSKDNLIGTGGFGEV-FKGILDDGTVTAIKRAKLGNTKGTDLVLNEVRILCQVN 384
R NF K IG G G V G A+K+ L + +L+ NEV I+ +
Sbjct: 44 REYLANFIK---IGEGSTGIVCIATEKHTGKQVAVKKMDLRKQQRRELLFNEVVIMRDYH 100
Query: 385 HRSLVRLLGCCVELDQTLMIYEYIPNGTLFDHLHCDFTGKWPPLPWHLRL------VIAH 438
H ++V + + D+ ++ E++ G L D + H R+ +
Sbjct: 101 HDNVVDMYSSYLVGDELWVVMEFLEGGALTD------------IVTHTRMNEEQIATVCL 148
Query: 439 QIAEGLTYLHSAAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDSHIFTTA 498
+ L+YLH+ V HRD+KS +ILL K+SDFG V + +
Sbjct: 149 SVLRALSYLHNQGV---IHRDIKSDSILLTSDGRIKLSDFGFCAQVSKEVPKRKXLV--- 202
Query: 499 QGTMGYLDPEYYRNFQLTDKSDVYSFGVVLLELL 532
GT ++ PE + D++S G++++E++
Sbjct: 203 -GTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMI 235
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 62/217 (28%), Positives = 105/217 (48%), Gaps = 35/217 (16%)
Query: 331 NFSKDNLIGTGGFGEVFKGIL-DDGTVTAIKRAKLGNTKGTDLVLNEVRILCQVNHRSLV 389
+++ +IG G FG V++ L D G + AIK+ L + + + E++I+ +++H ++V
Sbjct: 25 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV-LQDKRFKN---RELQIMRKLDHCNIV 80
Query: 390 RL----LGCCVELDQTLM--IYEYIPNGTLFDHLHCDFTGKWPPLPWHLRLVIAHQIAEG 443
RL + D+ + + +Y+P H + P+ +++L + +Q+
Sbjct: 81 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPV-IYVKLYM-YQLFRS 138
Query: 444 LTYLHSAAVPPIYHRDVKSSNILLDEKLNA-KVSDFGLSRLVERTETNDSHIFTTAQGTM 502
L Y+HS I HRD+K N+LLD K+ DFG ++ + R E N S I +
Sbjct: 139 LAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICS------ 189
Query: 503 GYLDPEYYRNFQL-------TDKSDVYSFGVVLLELL 532
YYR +L T DV+S G VL ELL
Sbjct: 190 -----RYYRAPELIFGATDYTSSIDVWSAGCVLAELL 221
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 93/209 (44%), Gaps = 19/209 (9%)
Query: 338 IGTGGFGEVFKGILD-DGTVTAIKRAK-----LGNTKGTDLVLNEVRILCQVNHRSLVRL 391
IG G +G V G AIK+ + N K T L E++IL H +++ +
Sbjct: 63 IGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRT---LRELKILKHFKHDNIIAI 119
Query: 392 ---LGCCVELDQTLMIYEYIPNGTLFDHLHCDFTGKWPPLPWHLRLVIAHQIAEGLTYLH 448
L V + +Y + + LH P H+R + +Q+ GL Y+H
Sbjct: 120 KDILRPTVPYGEFKSVYVVL--DLMESDLHQIIHSSQPLTLEHVRYFL-YQLLRGLKYMH 176
Query: 449 SAAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDSHIFTTAQGTMGYLDPE 508
SA V HRD+K SN+L++E K+ DFG++R + + + T T Y PE
Sbjct: 177 SAQV---IHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFMTEYVATRWYRAPE 233
Query: 509 YYRNF-QLTDKSDVYSFGVVLLELLTSKK 536
+ + T D++S G + E+L ++
Sbjct: 234 LMLSLHEYTQAIDLWSVGCIFGEMLARRQ 262
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 62/217 (28%), Positives = 105/217 (48%), Gaps = 35/217 (16%)
Query: 331 NFSKDNLIGTGGFGEVFKGIL-DDGTVTAIKRAKLGNTKGTDLVLNEVRILCQVNHRSLV 389
+++ +IG G FG V++ L D G + AIK+ L + + + E++I+ +++H ++V
Sbjct: 22 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV-LQDKRFKN---RELQIMRKLDHCNIV 77
Query: 390 RL----LGCCVELDQTLM--IYEYIPNGTLFDHLHCDFTGKWPPLPWHLRLVIAHQIAEG 443
RL + D+ + + +Y+P H + P+ +++L + +Q+
Sbjct: 78 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPV-IYVKLYM-YQLFRS 135
Query: 444 LTYLHSAAVPPIYHRDVKSSNILLDEKLNA-KVSDFGLSRLVERTETNDSHIFTTAQGTM 502
L Y+HS I HRD+K N+LLD K+ DFG ++ + R E N S I +
Sbjct: 136 LAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICS------ 186
Query: 503 GYLDPEYYRNFQL-------TDKSDVYSFGVVLLELL 532
YYR +L T DV+S G VL ELL
Sbjct: 187 -----RYYRAPELIFGATDYTSSIDVWSAGCVLAELL 218
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 65/236 (27%), Positives = 101/236 (42%), Gaps = 27/236 (11%)
Query: 330 NNFSKDNLIGTGGFGEVFKGIL----DDGTVTAIKRAKLGNTKGTDLV---LNEVRILCQ 382
N+F L+G G FG+V IL G A+K + D V + E R+L
Sbjct: 5 NDFDYLKLLGKGTFGKV---ILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQN 61
Query: 383 VNHRSLVRLLGCCVELDQTLMIYEYIPNGTLFDHLHCD--FTGKWPPLPWHLRLVIAHQI 440
H L L D+ + EY G LF HL + FT + +I
Sbjct: 62 TRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARF-------YGAEI 114
Query: 441 AEGLTYLHSAAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDSHIFTTAQG 500
L YLHS V +RD+K N++LD+ + K++DFGL + +D G
Sbjct: 115 VSALEYLHSRDV---VYRDIKLENLMLDKDGHIKITDFGLC----KEGISDGATMKXFCG 167
Query: 501 TMGYLDPEYYRNFQLTDKSDVYSFGVVLLELLTSKKAIDFNREEENVNLVVYMKKI 556
T YL PE + D + GVV+ E++ + +N++ E + ++ M++I
Sbjct: 168 TPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPF-YNQDHERLFELILMEEI 222
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 67/236 (28%), Positives = 103/236 (43%), Gaps = 27/236 (11%)
Query: 330 NNFSKDNLIGTGGFGEVFKGIL----DDGTVTAIKRAKLGNTKGTDLV---LNEVRILCQ 382
N+F L+G G FG+V IL G A+K + D V + E R+L
Sbjct: 5 NDFDYLKLLGKGTFGKV---ILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQN 61
Query: 383 VNHRSLVRLLGCCVELDQTLMIYEYIPNGTLFDHLHCD--FTGKWPPLPWHLRLVIAHQI 440
H L L D+ + EY G LF HL + FT + R A +I
Sbjct: 62 TRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEE------RARFYGA-EI 114
Query: 441 AEGLTYLHSAAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDSHIFTTAQG 500
L YLHS V +RD+K N++LD+ + K++DFGL + +D G
Sbjct: 115 VSALEYLHSRDV---VYRDIKLENLMLDKDGHIKITDFGLC----KEGISDGATMKXFCG 167
Query: 501 TMGYLDPEYYRNFQLTDKSDVYSFGVVLLELLTSKKAIDFNREEENVNLVVYMKKI 556
T YL PE + D + GVV+ E++ + +N++ E + ++ M++I
Sbjct: 168 TPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPF-YNQDHERLFELILMEEI 222
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 65/238 (27%), Positives = 99/238 (41%), Gaps = 22/238 (9%)
Query: 326 RRATNNFSKDNLIGTGGFGEVFKGIL----DDGTVTAIKRAKLGNTKGTDLV---LNEVR 378
R N F L+G G FG+V IL G A+K K D V L E R
Sbjct: 6 RVTMNEFEYLKLLGKGTFGKV---ILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENR 62
Query: 379 ILCQVNHRSLVRLLGCCVELDQTLMIYEYIPNGTLFDHLHCDFTGKWPPLPWHLRLVIAH 438
+L H L L D+ + EY G LF HL + ++
Sbjct: 63 VLQNSRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFY-----GA 117
Query: 439 QIAEGLTYLHSAAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDSHIFTTA 498
+I L YLHS + +RD+K N++LD+ + K++DFGL + D
Sbjct: 118 EIVSALDYLHSEK--NVVYRDLKLENLMLDKDGHIKITDFGLC----KEGIKDGATMKXF 171
Query: 499 QGTMGYLDPEYYRNFQLTDKSDVYSFGVVLLELLTSKKAIDFNREEENVNLVVYMKKI 556
GT YL PE + D + GVV+ E++ + +N++ E + ++ M++I
Sbjct: 172 CGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPF-YNQDHEKLFELILMEEI 228
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 93/217 (42%), Gaps = 21/217 (9%)
Query: 330 NNFSKDNLIGTGGFGEVFKGILDDG----TVTAIKRAKLGNTKGTDLVLNEVRILCQV-N 384
+F +IG G + +V L + +K+ + + + D V E + Q N
Sbjct: 5 QDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASN 64
Query: 385 HRSLVRLLGCCVELDQTLMIYEYIPNGTLFDHLHCDFTGKWPPLPWHLRLVIAHQIAEGL 444
H LV L C + + EY+ G L H+ + LP + +I+ L
Sbjct: 65 HPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQ-----RQRKLPEEHARFYSAEISLAL 119
Query: 445 TYLHSAAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDSHIFTTAQ--GTM 502
YLH I +RD+K N+LLD + + K++D+G+ + E D TT+ GT
Sbjct: 120 NYLHERG---IIYRDLKLDNVLLDSEGHIKLTDYGMCK--EGLRPGD----TTSXFCGTP 170
Query: 503 GYLDPEYYRNFQLTDKSDVYSFGVVLLELLTSKKAID 539
Y+ PE R D ++ GV++ E++ + D
Sbjct: 171 NYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFD 207
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 65/238 (27%), Positives = 99/238 (41%), Gaps = 22/238 (9%)
Query: 326 RRATNNFSKDNLIGTGGFGEVFKGIL----DDGTVTAIKRAKLGNTKGTDLV---LNEVR 378
R N F L+G G FG+V IL G A+K K D V L E R
Sbjct: 4 RVTMNEFEYLKLLGKGTFGKV---ILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENR 60
Query: 379 ILCQVNHRSLVRLLGCCVELDQTLMIYEYIPNGTLFDHLHCDFTGKWPPLPWHLRLVIAH 438
+L H L L D+ + EY G LF HL + ++
Sbjct: 61 VLQNSRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFY-----GA 115
Query: 439 QIAEGLTYLHSAAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDSHIFTTA 498
+I L YLHS + +RD+K N++LD+ + K++DFGL + D
Sbjct: 116 EIVSALDYLHSEK--NVVYRDLKLENLMLDKDGHIKITDFGLC----KEGIKDGATMKXF 169
Query: 499 QGTMGYLDPEYYRNFQLTDKSDVYSFGVVLLELLTSKKAIDFNREEENVNLVVYMKKI 556
GT YL PE + D + GVV+ E++ + +N++ E + ++ M++I
Sbjct: 170 CGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPF-YNQDHEKLFELILMEEI 226
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 100/220 (45%), Gaps = 35/220 (15%)
Query: 332 FSKDNLIGTGGFGEVFKGILD-DGTVTAIKR-AKLGNTKGTDLVLNEVRILCQVNHRSLV 389
+++ IG G +G V T AIK+ + + L E++IL + H +++
Sbjct: 45 YTQLQYIGEGAYGMVSSAYDHVRKTRVAIKKISPFEHQTYCQRTLREIQILLRFRHENVI 104
Query: 390 RLLGCC----------VELDQTLM---IYEYIPNGTLFDHLHCDFTGKWPPLPWHLRLVI 436
+ V + Q LM +Y+ + + L + C F
Sbjct: 105 GIRDILRASTLEAMRDVYIVQDLMETDLYKLLKSQQLSNDHICYFL-------------- 150
Query: 437 AHQIAEGLTYLHSAAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDSHIFT 496
+QI GL Y+HSA V HRD+K SN+L++ + K+ DFGL+R+ + E + + T
Sbjct: 151 -YQILRGLKYIHSANV---LHRDLKPSNLLINTTCDLKICDFGLARIAD-PEHDHTGFLT 205
Query: 497 TAQGTMGYLDPEYYRNFQLTDKS-DVYSFGVVLLELLTSK 535
T Y PE N + KS D++S G +L E+L+++
Sbjct: 206 EXVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 245
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 93/217 (42%), Gaps = 21/217 (9%)
Query: 330 NNFSKDNLIGTGGFGEVFKGILDDG----TVTAIKRAKLGNTKGTDLVLNEVRILCQV-N 384
+F +IG G + +V L + +K+ + + + D V E + Q N
Sbjct: 9 QDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASN 68
Query: 385 HRSLVRLLGCCVELDQTLMIYEYIPNGTLFDHLHCDFTGKWPPLPWHLRLVIAHQIAEGL 444
H LV L C + + EY+ G L H+ + LP + +I+ L
Sbjct: 69 HPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQ-----RQRKLPEEHARFYSAEISLAL 123
Query: 445 TYLHSAAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDSHIFTTAQ--GTM 502
YLH I +RD+K N+LLD + + K++D+G+ + E D TT+ GT
Sbjct: 124 NYLHERG---IIYRDLKLDNVLLDSEGHIKLTDYGMCK--EGLRPGD----TTSXFCGTP 174
Query: 503 GYLDPEYYRNFQLTDKSDVYSFGVVLLELLTSKKAID 539
Y+ PE R D ++ GV++ E++ + D
Sbjct: 175 NYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFD 211
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/159 (27%), Positives = 76/159 (47%), Gaps = 13/159 (8%)
Query: 375 NEVRILCQVNHRSLVRLLGCCVELDQTLMIYEYIPNGTL--FDHLHCDFTGKWP-PLPWH 431
NE++I+ + + + G D+ +IYEY+ N ++ FD + +P
Sbjct: 92 NELQIITDIKNEYCLTCEGIITNYDEVYIIYEYMENDSILKFDEYFFVLDKNYTCFIPIQ 151
Query: 432 LRLVIAHQIAEGLTYLHSAAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVERTETND 491
+ I + +Y+H+ I HRDVK SNIL+D+ K+SDFG S + +
Sbjct: 152 VIKCIIKSVLNSFSYIHNEK--NICHRDVKPSNILMDKNGRVKLSDFGESEYMVDKKIKG 209
Query: 492 SHIFTTAQGTMGYLDPEYYRNFQLTD--KSDVYSFGVVL 528
S +GT ++ PE++ N + K D++S G+ L
Sbjct: 210 S------RGTYEFMPPEFFSNESSYNGAKVDIWSLGICL 242
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 96/202 (47%), Gaps = 20/202 (9%)
Query: 338 IGTGGFGEVFKGILDD-GTVTAIKRAKLGNTKGTDL--VLNEVRILCQVNHRSLVRLLGC 394
+G G +G V+K I + G + AIK+ + +DL ++ E+ I+ Q + +V+ G
Sbjct: 37 LGEGSYGSVYKAIHKETGQIVAIKQVPVE----SDLQEIIKEISIMQQCDSPHVVKYYGS 92
Query: 395 CVELDQTLMIYEYIPNGTLFDHLHCDFTGKWPPLPWHLRLVIAHQIAEGLTYLHSAAVPP 454
+ ++ EY G++ D + + L I +GL YLH
Sbjct: 93 YFKNTDLWIVMEYCGAGSVSDIIRL----RNKTLTEDEIATILQSTLKGLEYLHFMRK-- 146
Query: 455 IYHRDVKSSNILLDEKLNAKVSDFGLS-RLVERTETNDSHIFTTAQGTMGYLDPEYYRNF 513
HRD+K+ NILL+ + +AK++DFG++ +L + + I GT ++ PE +
Sbjct: 147 -IHRDIKAGNILLNTEGHAKLADFGVAGQLTDXMAKRNXVI-----GTPFWMAPEVIQEI 200
Query: 514 QLTDKSDVYSFGVVLLELLTSK 535
+D++S G+ +E+ K
Sbjct: 201 GYNCVADIWSLGITAIEMAEGK 222
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 94/206 (45%), Gaps = 20/206 (9%)
Query: 337 LIGTGGFGEVFK----GILDDGTVTAIKRAK----LGNTKGTDLVLNEVRILCQVNHRSL 388
++G GG+G+VF+ + G + A+K K + N K T E IL +V H +
Sbjct: 24 VLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFI 83
Query: 389 VRLLGCCVELDQTLMIYEYIPNGTLFDHLHCDFTGKWPPLPWHLRLVIAHQIAEGLTYLH 448
V L+ + +I EY+ G LF L + ++L +I+ L +LH
Sbjct: 84 VDLIYAFQTGGKLYLILEYLSGGELFMQLEREGIFMEDTACFYLA-----EISMALGHLH 138
Query: 449 SAAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDSHIFTTAQGTMGYLDPE 508
I +RD+K NI+L+ + + K++DFGL + +D + GT+ Y+ PE
Sbjct: 139 QKG---IIYRDLKPENIMLNHQGHVKLTDFGLC----KESIHDGTVTHXFCGTIEYMAPE 191
Query: 509 YYRNFQLTDKSDVYSFGVVLLELLTS 534
D +S G ++ ++LT
Sbjct: 192 ILMRSGHNRAVDWWSLGALMYDMLTG 217
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 62/234 (26%), Positives = 101/234 (43%), Gaps = 23/234 (9%)
Query: 328 ATNNFSKDNLIGTGGFGEVFKGI-LDDGTVTAIKRAKLGN-TKGTDL-VLNEVRILCQVN 384
AT+ + IG G +G V+K G A+K ++ N +G + + EV +L ++
Sbjct: 2 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLE 61
Query: 385 ---HRSLVRLLGCCVELDQTLMIYEYIPNGTLFDHLHCD---FTGKWPP--LPWHLRLVI 436
H ++VRL+ C T I +F+H+ D + K PP LP +
Sbjct: 62 AFEHPNVVRLMDVCA----TSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDL 117
Query: 437 AHQIAEGLTYLHSAAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDSHIFT 496
Q GL +LH+ I HRD+K NIL+ K++DFGL+R+ + +F
Sbjct: 118 MRQFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIY----SYQMALFP 170
Query: 497 TAQGTMGYLDPEYYRNFQLTDKSDVYSFGVVLLELLTSKKAIDFNREEENVNLV 550
T+ Y PE D++S G + E+ K N E + + +
Sbjct: 171 VVV-TLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKI 223
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 93/209 (44%), Gaps = 19/209 (9%)
Query: 338 IGTGGFGEVFKGILD-DGTVTAIKRAK-----LGNTKGTDLVLNEVRILCQVNHRSLVRL 391
IG G +G V G AIK+ + N K T L E++IL H +++ +
Sbjct: 62 IGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRT---LRELKILKHFKHDNIIAI 118
Query: 392 ---LGCCVELDQTLMIYEYIPNGTLFDHLHCDFTGKWPPLPWHLRLVIAHQIAEGLTYLH 448
L V + +Y + + LH P H+R + +Q+ GL Y+H
Sbjct: 119 KDILRPTVPYGEFKSVYVVL--DLMESDLHQIIHSSQPLTLEHVRYFL-YQLLRGLKYMH 175
Query: 449 SAAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDSHIFTTAQGTMGYLDPE 508
SA V HRD+K SN+L++E K+ DFG++R + + + T T Y PE
Sbjct: 176 SAQV---IHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFMTEYVATRWYRAPE 232
Query: 509 YYRNF-QLTDKSDVYSFGVVLLELLTSKK 536
+ + T D++S G + E+L ++
Sbjct: 233 LMLSLHEYTQAIDLWSVGCIFGEMLARRQ 261
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 61/234 (26%), Positives = 99/234 (42%), Gaps = 23/234 (9%)
Query: 328 ATNNFSKDNLIGTGGFGEVFKGI-LDDGTVTAIKRAKLGN-TKGTDL-VLNEVRILCQVN 384
AT+ + IG G +G V+K G A+K ++ N +G + + EV +L ++
Sbjct: 2 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLE 61
Query: 385 ---HRSLVRLLGCCVELDQTLMIYEYIPNGTLFDHLHCD---FTGKWPP--LPWHLRLVI 436
H ++VRL+ C T I +F+H+ D + K PP LP +
Sbjct: 62 AFEHPNVVRLMDVCA----TSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDL 117
Query: 437 AHQIAEGLTYLHSAAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDSHIFT 496
Q GL +LH+ I HRD+K NIL+ K++DFGL+R+ +
Sbjct: 118 MRQFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIY-----SYQMALA 169
Query: 497 TAQGTMGYLDPEYYRNFQLTDKSDVYSFGVVLLELLTSKKAIDFNREEENVNLV 550
T+ Y PE D++S G + E+ K N E + + +
Sbjct: 170 PVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKI 223
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 59/234 (25%), Positives = 96/234 (41%), Gaps = 27/234 (11%)
Query: 329 TNNFSKDNL-----IGTGGFGEVFKGILDDGT-VTAIK---RAKLGNTKGTDLVLNEVRI 379
T +F+ D+ +G G FG V+ + A+K ++++ + E+ I
Sbjct: 17 TRHFTIDDFEIGRPLGKGKFGNVYLAREKKSHFIVALKVLFKSQIEKEGVEHQLRREIEI 76
Query: 380 LCQVNHRSLVRLLGCCVELDQTLMIYEYIPNGTLFDHLH--CDFTGKWPPLPWHLRLVIA 437
++H +++RL + + +I EY P G L+ L C F + I
Sbjct: 77 QAHLHHPNILRLYNYFYDRRRIYLILEYAPRGELYKELQKSCTFDEQRTA-------TIM 129
Query: 438 HQIAEGLTYLHSAAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDSHIFTT 497
++A+ L Y H V HRD+K N+LL K K++DFG S T
Sbjct: 130 EELADALMYCHGKKV---IHRDIKPENLLLGLKGELKIADFGWSVHAPSLRRK------T 180
Query: 498 AQGTMGYLDPEYYRNFQLTDKSDVYSFGVVLLELLTSKKAIDFNREEENVNLVV 551
GT+ YL PE +K D++ GV+ ELL + E +V
Sbjct: 181 MCGTLDYLPPEMIEGRMHNEKVDLWCIGVLCYELLVGNPPFESASHNETYRRIV 234
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 41/131 (31%), Positives = 65/131 (49%), Gaps = 16/131 (12%)
Query: 434 LVIAHQIAEGLTYLHSAAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDSH 493
L I QIAE + +LHS + HRD+K SNI KV DFGL +++ E +
Sbjct: 167 LHIFIQIAEAVEFLHSKG---LMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTV 223
Query: 494 I-----FTTAQGTMG---YLDPEYYRNFQLTDKSDVYSFGVVLLELLTSKKAIDFNREEE 545
+ + T G +G Y+ PE + K D++S G++L ELL S F+ + E
Sbjct: 224 LTPMPAYATHXGQVGTKLYMSPEQIHGNNYSHKVDIFSLGLILFELLYS-----FSTQME 278
Query: 546 NVNLVVYMKKI 556
V ++ ++ +
Sbjct: 279 RVRIITDVRNL 289
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 38/74 (51%), Gaps = 4/74 (5%)
Query: 327 RATNNFSKDNLIGTGGFGEVF--KGILDDGTVTAIKRAKLGNTK-GTDLVLNEVRILCQV 383
R +F +G GGFG VF K +DD AIKR +L N + + V+ EV+ L ++
Sbjct: 3 RYLTDFEPIQCMGRGGFGVVFEAKNKVDDCNY-AIKRIRLPNRELAREKVMREVKALAKL 61
Query: 384 NHRSLVRLLGCCVE 397
H +VR +E
Sbjct: 62 EHPGIVRYFNAWLE 75
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 64/238 (26%), Positives = 109/238 (45%), Gaps = 24/238 (10%)
Query: 309 NAKAAGKSARIFT--GKEIRRATNNFSKDNLIGTGGFGEVFK-GILDDGTVTAIKRAKL- 364
++ ++GK T G+ + N+ +G+G G+V+K G V A+K+ +
Sbjct: 2 SSGSSGKQTGYLTIGGQRYQAEINDLENLGEMGSGTCGQVWKMRFRKTGHVIAVKQMRRS 61
Query: 365 GNTKGTDLVLNEVRILCQVNH-RSLVRLLGCCVELDQTLMIYEYIPNGTLFDHLHCDFTG 423
GN + +L ++ ++ + + +V+ G + + E + GT + L G
Sbjct: 62 GNKEENKRILMDLDVVLKSHDCPYIVQCFGTFITNTDVFIAMELM--GTCAEKLKKRMQG 119
Query: 424 KWPPLPWHLRLVIAHQIAEGLTYLHSAAVPPIYHRDVKSSNILLDEKLNAKVSDFGLS-R 482
P+P + + I + L YL + HRDVK SNILLDE+ K+ DFG+S R
Sbjct: 120 ---PIPERILGKMTVAIVKALYYLKEKH--GVIHRDVKPSNILLDERGQIKLCDFGISGR 174
Query: 483 LVERTETNDSHIFTTAQGTMGYLDPEYYRNFQLTD-----KSDVYSFGVVLLELLTSK 535
LV+ + S G Y+ PE T ++DV+S G+ L+EL T +
Sbjct: 175 LVDDKAKDRS------AGCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQ 226
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 95/214 (44%), Gaps = 35/214 (16%)
Query: 338 IGTGGFGEVFKGI--LDDGTVTAIKRAKLGNTKGTDLVLNEVRILCQVNHRSLVRLLGCC 395
IG G +G V L+ V K + + L E++IL + H +++ +
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYXQRTLREIKILLRFRHENIIGINDII 94
Query: 396 ----------VELDQTLM---IYEYIPNGTLFDHLHCDFTGKWPPLPWHLRLVIAHQIAE 442
V + Q LM +Y+ + L + C F +QI
Sbjct: 95 RAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFL---------------YQILR 139
Query: 443 GLTYLHSAAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDSHIFTTAQGTM 502
GL Y+HSA V HRD+K SN+LL+ + K+ DFGL+R+ + + + + T T
Sbjct: 140 GLKYIHSANV---LHRDLKPSNLLLNTTXDLKICDFGLARVAD-PDHDHTGFLTEYVATR 195
Query: 503 GYLDPEYYRNFQLTDKS-DVYSFGVVLLELLTSK 535
Y PE N + KS D++S G +L E+L+++
Sbjct: 196 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 37/99 (37%), Positives = 58/99 (58%), Gaps = 5/99 (5%)
Query: 438 HQIAEGLTYLHSAAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDSHIFTT 497
+QI GL Y+HSA V HRD+K SN+LL+ + K+ DFGL+R+ + + + + T
Sbjct: 131 YQILRGLKYIHSANV---LHRDLKPSNLLLNTTXDLKIXDFGLARVAD-PDHDHTGFLTE 186
Query: 498 AQGTMGYLDPEYYRNFQLTDKS-DVYSFGVVLLELLTSK 535
T Y PE N + KS D++S G +L E+L+++
Sbjct: 187 YVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 95/214 (44%), Gaps = 35/214 (16%)
Query: 338 IGTGGFGEVFKGI--LDDGTVTAIKRAKLGNTKGTDLVLNEVRILCQVNHRSLVRLLGCC 395
IG G +G V L+ V K + + L E++IL + H +++ +
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 94
Query: 396 ----------VELDQTLM---IYEYIPNGTLFDHLHCDFTGKWPPLPWHLRLVIAHQIAE 442
V + Q LM +Y+ + L + C F +QI
Sbjct: 95 RAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFL---------------YQILR 139
Query: 443 GLTYLHSAAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDSHIFTTAQGTM 502
GL Y+HSA V HRD+K SN+LL+ + K+ DFGL+R+ + + + + T T
Sbjct: 140 GLKYIHSANV---LHRDLKPSNLLLNTTXDLKICDFGLARVAD-PDHDHTGFLTEYVATR 195
Query: 503 GYLDPEYYRNFQLTDKS-DVYSFGVVLLELLTSK 535
Y PE N + KS D++S G +L E+L+++
Sbjct: 196 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 37/99 (37%), Positives = 58/99 (58%), Gaps = 5/99 (5%)
Query: 438 HQIAEGLTYLHSAAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDSHIFTT 497
+QI GL Y+HSA V HRD+K SN+LL+ + K+ DFGL+R+ + + + + T
Sbjct: 151 YQILRGLKYIHSANV---LHRDLKPSNLLLNTTXDLKICDFGLARVAD-PDHDHTGFLTE 206
Query: 498 AQGTMGYLDPEYYRNFQLTDKS-DVYSFGVVLLELLTSK 535
T Y PE N + KS D++S G +L E+L+++
Sbjct: 207 YVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 245
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 97/214 (45%), Gaps = 35/214 (16%)
Query: 338 IGTGGFGEVFKGILDDGTV-TAIKR-AKLGNTKGTDLVLNEVRILCQVNHRSLVRLLGCC 395
IG G +G V + V AIK+ + + L E++IL + H +++ +
Sbjct: 31 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 90
Query: 396 ----------VELDQTLM---IYEYIPNGTLFDHLHCDFTGKWPPLPWHLRLVIAHQIAE 442
V + Q LM +Y+ + L + C F +QI
Sbjct: 91 RAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFL---------------YQILR 135
Query: 443 GLTYLHSAAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDSHIFTTAQGTM 502
GL Y+HSA V HRD+K SN+LL+ + K+ DFGL+R+ + + + + T T
Sbjct: 136 GLKYIHSANV---LHRDLKPSNLLLNTTXDLKICDFGLARVAD-PDHDHTGFLTEYVATR 191
Query: 503 GYLDPEYYRNFQLTDKS-DVYSFGVVLLELLTSK 535
Y PE N + KS D++S G +L E+L+++
Sbjct: 192 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 92/204 (45%), Gaps = 12/204 (5%)
Query: 336 NLIGTGGFGEVFK-GILDDGTVTA---IKRAKLGNTKGTDLVLNEVRILCQVNHRSLVRL 391
++G GGFGEVF + G + A + + +L KG + E +IL +V+ R +V L
Sbjct: 191 RVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSL 250
Query: 392 LGCCVELDQTLMIYEYIPNGTLFDHLHCDFTGKWPPLPWHLRLVIAHQIAEGLTYLHSAA 451
E L + I NG + + P + QI GL +LH
Sbjct: 251 -AYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQRN 309
Query: 452 VPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDSHIFTTAQGTMGYLDPEYYR 511
I +RD+K N+LLD+ N ++SD GL+ ++ +T GT G++ PE
Sbjct: 310 ---IIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGY----AGTPGFMAPELLL 362
Query: 512 NFQLTDKSDVYSFGVVLLELLTSK 535
+ D ++ GV L E++ ++
Sbjct: 363 GEEYDFSVDYFALGVTLYEMIAAR 386
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 95/214 (44%), Gaps = 35/214 (16%)
Query: 338 IGTGGFGEVFKGI--LDDGTVTAIKRAKLGNTKGTDLVLNEVRILCQVNHRSLVRLLGCC 395
IG G +G V L+ V K + + L E++IL + H +++ +
Sbjct: 29 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 88
Query: 396 ----------VELDQTLM---IYEYIPNGTLFDHLHCDFTGKWPPLPWHLRLVIAHQIAE 442
V + Q LM +Y+ + L + C F +QI
Sbjct: 89 RAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFL---------------YQILR 133
Query: 443 GLTYLHSAAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDSHIFTTAQGTM 502
GL Y+HSA V HRD+K SN+LL+ + K+ DFGL+R+ + + + + T T
Sbjct: 134 GLKYIHSANV---LHRDLKPSNLLLNTTCDLKICDFGLARVAD-PDHDHTGFLTEYVATR 189
Query: 503 GYLDPEYYRNFQLTDKS-DVYSFGVVLLELLTSK 535
Y PE N + KS D++S G +L E+L+++
Sbjct: 190 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 223
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 95/214 (44%), Gaps = 35/214 (16%)
Query: 338 IGTGGFGEVFKGI--LDDGTVTAIKRAKLGNTKGTDLVLNEVRILCQVNHRSLVRLLGCC 395
IG G +G V L+ V K + + L E++IL + H +++ +
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVAIRKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 94
Query: 396 ----------VELDQTLM---IYEYIPNGTLFDHLHCDFTGKWPPLPWHLRLVIAHQIAE 442
V + Q LM +Y+ + L + C F +QI
Sbjct: 95 RAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFL---------------YQILR 139
Query: 443 GLTYLHSAAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDSHIFTTAQGTM 502
GL Y+HSA V HRD+K SN+LL+ + K+ DFGL+R+ + + + + T T
Sbjct: 140 GLKYIHSANV---LHRDLKPSNLLLNTTCDLKICDFGLARVAD-PDHDHTGFLTEYVATR 195
Query: 503 GYLDPEYYRNFQLTDKS-DVYSFGVVLLELLTSK 535
Y PE N + KS D++S G +L E+L+++
Sbjct: 196 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 92/204 (45%), Gaps = 12/204 (5%)
Query: 336 NLIGTGGFGEVFK-GILDDGTVTA---IKRAKLGNTKGTDLVLNEVRILCQVNHRSLVRL 391
++G GGFGEVF + G + A + + +L KG + E +IL +V+ R +V L
Sbjct: 191 RVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSL 250
Query: 392 LGCCVELDQTLMIYEYIPNGTLFDHLHCDFTGKWPPLPWHLRLVIAHQIAEGLTYLHSAA 451
E L + I NG + + P + QI GL +LH
Sbjct: 251 -AYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQRN 309
Query: 452 VPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDSHIFTTAQGTMGYLDPEYYR 511
I +RD+K N+LLD+ N ++SD GL+ ++ +T GT G++ PE
Sbjct: 310 ---IIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGY----AGTPGFMAPELLL 362
Query: 512 NFQLTDKSDVYSFGVVLLELLTSK 535
+ D ++ GV L E++ ++
Sbjct: 363 GEEYDFSVDYFALGVTLYEMIAAR 386
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 95/214 (44%), Gaps = 35/214 (16%)
Query: 338 IGTGGFGEVFKGI--LDDGTVTAIKRAKLGNTKGTDLVLNEVRILCQVNHRSLVRLLGCC 395
IG G +G V L+ V K + + L E++IL + H +++ +
Sbjct: 36 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 95
Query: 396 ----------VELDQTLM---IYEYIPNGTLFDHLHCDFTGKWPPLPWHLRLVIAHQIAE 442
V + Q LM +Y+ + L + C F +QI
Sbjct: 96 RAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFL---------------YQILR 140
Query: 443 GLTYLHSAAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDSHIFTTAQGTM 502
GL Y+HSA V HRD+K SN+LL+ + K+ DFGL+R+ + + + + T T
Sbjct: 141 GLKYIHSANV---LHRDLKPSNLLLNTTCDLKICDFGLARVAD-PDHDHTGFLTEYVATR 196
Query: 503 GYLDPEYYRNFQLTDKS-DVYSFGVVLLELLTSK 535
Y PE N + KS D++S G +L E+L+++
Sbjct: 197 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 230
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 95/214 (44%), Gaps = 35/214 (16%)
Query: 338 IGTGGFGEVFKGI--LDDGTVTAIKRAKLGNTKGTDLVLNEVRILCQVNHRSLVRLLGCC 395
IG G +G V L+ V K + + L E++IL + H +++ +
Sbjct: 37 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 96
Query: 396 ----------VELDQTLM---IYEYIPNGTLFDHLHCDFTGKWPPLPWHLRLVIAHQIAE 442
V + Q LM +Y+ + L + C F +QI
Sbjct: 97 RAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFL---------------YQILR 141
Query: 443 GLTYLHSAAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDSHIFTTAQGTM 502
GL Y+HSA V HRD+K SN+LL+ + K+ DFGL+R+ + + + + T T
Sbjct: 142 GLKYIHSANV---LHRDLKPSNLLLNTTCDLKICDFGLARVAD-PDHDHTGFLTEYVATR 197
Query: 503 GYLDPEYYRNFQLTDKS-DVYSFGVVLLELLTSK 535
Y PE N + KS D++S G +L E+L+++
Sbjct: 198 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 231
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 95/214 (44%), Gaps = 35/214 (16%)
Query: 338 IGTGGFGEVFKGI--LDDGTVTAIKRAKLGNTKGTDLVLNEVRILCQVNHRSLVRLLGCC 395
IG G +G V L+ V K + + L E++IL + H +++ +
Sbjct: 28 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 87
Query: 396 ----------VELDQTLM---IYEYIPNGTLFDHLHCDFTGKWPPLPWHLRLVIAHQIAE 442
V + Q LM +Y+ + L + C F +QI
Sbjct: 88 RAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFL---------------YQILR 132
Query: 443 GLTYLHSAAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDSHIFTTAQGTM 502
GL Y+HSA V HRD+K SN+LL+ + K+ DFGL+R+ + + + + T T
Sbjct: 133 GLKYIHSANV---LHRDLKPSNLLLNTTCDLKICDFGLARVAD-PDHDHTGFLTEYVATR 188
Query: 503 GYLDPEYYRNFQLTDKS-DVYSFGVVLLELLTSK 535
Y PE N + KS D++S G +L E+L+++
Sbjct: 189 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 222
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 95/214 (44%), Gaps = 35/214 (16%)
Query: 338 IGTGGFGEVFKGI--LDDGTVTAIKRAKLGNTKGTDLVLNEVRILCQVNHRSLVRLLGCC 395
IG G +G V L+ V K + + L E++IL + H +++ +
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 94
Query: 396 ----------VELDQTLM---IYEYIPNGTLFDHLHCDFTGKWPPLPWHLRLVIAHQIAE 442
V + Q LM +Y+ + L + C F +QI
Sbjct: 95 RAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFL---------------YQILR 139
Query: 443 GLTYLHSAAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDSHIFTTAQGTM 502
GL Y+HSA V HRD+K SN+LL+ + K+ DFGL+R+ + + + + T T
Sbjct: 140 GLKYIHSANV---LHRDLKPSNLLLNTTCDLKICDFGLARVAD-PDHDHTGFLTEYVATR 195
Query: 503 GYLDPEYYRNFQLTDKS-DVYSFGVVLLELLTSK 535
Y PE N + KS D++S G +L E+L+++
Sbjct: 196 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 92/204 (45%), Gaps = 12/204 (5%)
Query: 336 NLIGTGGFGEVFK-GILDDGTVTA---IKRAKLGNTKGTDLVLNEVRILCQVNHRSLVRL 391
++G GGFGEVF + G + A + + +L KG + E +IL +V+ R +V L
Sbjct: 191 RVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSL 250
Query: 392 LGCCVELDQTLMIYEYIPNGTLFDHLHCDFTGKWPPLPWHLRLVIAHQIAEGLTYLHSAA 451
E L + I NG + + P + QI GL +LH
Sbjct: 251 -AYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQRN 309
Query: 452 VPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDSHIFTTAQGTMGYLDPEYYR 511
I +RD+K N+LLD+ N ++SD GL+ ++ +T GT G++ PE
Sbjct: 310 ---IIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGY----AGTPGFMAPELLL 362
Query: 512 NFQLTDKSDVYSFGVVLLELLTSK 535
+ D ++ GV L E++ ++
Sbjct: 363 GEEYDFSVDYFALGVTLYEMIAAR 386
>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The
Murine Receptor Tyrosine Kinase Tyro3 (Sky)
Length = 323
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 102/220 (46%), Gaps = 24/220 (10%)
Query: 330 NNFSKDNLIGTGGFGEVFKGIL--DDGTVT--AIKRAKLGNTKGTDL--VLNEVRILCQV 383
F+ ++G G FG V + L +DG+ A+K K +D+ L E + +
Sbjct: 23 QQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEF 82
Query: 384 NHRSLVRLLGCCVE------LDQTLMIYEYIPNGTLFDHLHCDFTGKWP---PLPWHLRL 434
+H + +L+G + L ++I ++ +G L L G+ P PL +R
Sbjct: 83 DHPHVAKLVGVSLRSRAKGRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRF 142
Query: 435 VIAHQIAEGLTYLHSAAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDSHI 494
++ IA G+ YL S HRD+ + N +L E + V+DFGLSR + + D +
Sbjct: 143 MV--DIACGMEYLSSRN---FIHRDLAARNCMLAEDMTVCVADFGLSR---KIYSGDYYR 194
Query: 495 FTTAQGT-MGYLDPEYYRNFQLTDKSDVYSFGVVLLELLT 533
A + +L E + T SDV++FGV + E++T
Sbjct: 195 QGCASKLPVKWLALESLADNLYTVHSDVWAFGVTMWEIMT 234
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 92/204 (45%), Gaps = 12/204 (5%)
Query: 336 NLIGTGGFGEVFK-GILDDGTVTA---IKRAKLGNTKGTDLVLNEVRILCQVNHRSLVRL 391
++G GGFGEVF + G + A + + +L KG + E +IL +V+ R +V L
Sbjct: 191 RVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSL 250
Query: 392 LGCCVELDQTLMIYEYIPNGTLFDHLHCDFTGKWPPLPWHLRLVIAHQIAEGLTYLHSAA 451
E L + I NG + + P + QI GL +LH
Sbjct: 251 -AYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQRN 309
Query: 452 VPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDSHIFTTAQGTMGYLDPEYYR 511
I +RD+K N+LLD+ N ++SD GL+ ++ +T GT G++ PE
Sbjct: 310 ---IIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGY----AGTPGFMAPELLL 362
Query: 512 NFQLTDKSDVYSFGVVLLELLTSK 535
+ D ++ GV L E++ ++
Sbjct: 363 GEEYDFSVDYFALGVTLYEMIAAR 386
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 97/214 (45%), Gaps = 35/214 (16%)
Query: 338 IGTGGFGEVFKGILDDGTV-TAIKR-AKLGNTKGTDLVLNEVRILCQVNHRSLVRLLGCC 395
IG G +G V + V AIK+ + + L E++IL + H +++ +
Sbjct: 31 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 90
Query: 396 ----------VELDQTLM---IYEYIPNGTLFDHLHCDFTGKWPPLPWHLRLVIAHQIAE 442
V + Q LM +Y+ + L + C F +QI
Sbjct: 91 RAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFL---------------YQILR 135
Query: 443 GLTYLHSAAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDSHIFTTAQGTM 502
GL Y+HSA V HRD+K SN+LL+ + K+ DFGL+R+ + + + + T T
Sbjct: 136 GLKYIHSANV---LHRDLKPSNLLLNTTXDLKICDFGLARVAD-PDHDHTGFLTEYVATR 191
Query: 503 GYLDPEYYRNFQLTDKS-DVYSFGVVLLELLTSK 535
Y PE N + KS D++S G +L E+L+++
Sbjct: 192 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 37/99 (37%), Positives = 58/99 (58%), Gaps = 5/99 (5%)
Query: 438 HQIAEGLTYLHSAAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDSHIFTT 497
+QI GL Y+HSA V HRD+K SN+LL+ + K+ DFGL+R+ + + + + T
Sbjct: 133 YQILRGLKYIHSANV---LHRDLKPSNLLLNTTCDLKICDFGLARVAD-PDHDHTGFLTE 188
Query: 498 AQGTMGYLDPEYYRNFQLTDKS-DVYSFGVVLLELLTSK 535
T Y PE N + KS D++S G +L E+L+++
Sbjct: 189 YVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 227
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 97/214 (45%), Gaps = 35/214 (16%)
Query: 338 IGTGGFGEVFKGILDDGTV-TAIKR-AKLGNTKGTDLVLNEVRILCQVNHRSLVRLLGCC 395
IG G +G V + V AIK+ + + L E++IL + H +++ +
Sbjct: 33 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 92
Query: 396 ----------VELDQTLM---IYEYIPNGTLFDHLHCDFTGKWPPLPWHLRLVIAHQIAE 442
V + Q LM +Y+ + L + C F +QI
Sbjct: 93 RAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFL---------------YQILR 137
Query: 443 GLTYLHSAAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDSHIFTTAQGTM 502
GL Y+HSA V HRD+K SN+LL+ + K+ DFGL+R+ + + + + T T
Sbjct: 138 GLKYIHSANV---LHRDLKPSNLLLNTTCDLKICDFGLARVAD-PDHDHTGFLTEYVATR 193
Query: 503 GYLDPEYYRNFQLTDKS-DVYSFGVVLLELLTSK 535
Y PE N + KS D++S G +L E+L+++
Sbjct: 194 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 227
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 95/214 (44%), Gaps = 35/214 (16%)
Query: 338 IGTGGFGEVFKGI--LDDGTVTAIKRAKLGNTKGTDLVLNEVRILCQVNHRSLVRLLGCC 395
IG G +G V L+ V K + + L E++IL + H +++ +
Sbjct: 29 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 88
Query: 396 ----------VELDQTLM---IYEYIPNGTLFDHLHCDFTGKWPPLPWHLRLVIAHQIAE 442
V + Q LM +Y+ + L + C F +QI
Sbjct: 89 RAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFL---------------YQILR 133
Query: 443 GLTYLHSAAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDSHIFTTAQGTM 502
GL Y+HSA V HRD+K SN+LL+ + K+ DFGL+R+ + + + + T T
Sbjct: 134 GLKYIHSANV---LHRDLKPSNLLLNTTCDLKICDFGLARVAD-PDHDHTGFLTEYVATR 189
Query: 503 GYLDPEYYRNFQLTDKS-DVYSFGVVLLELLTSK 535
Y PE N + KS D++S G +L E+L+++
Sbjct: 190 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 223
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 37/99 (37%), Positives = 58/99 (58%), Gaps = 5/99 (5%)
Query: 438 HQIAEGLTYLHSAAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDSHIFTT 497
+QI GL Y+HSA V HRD+K SN+LL+ + K+ DFGL+R+ + + + + T
Sbjct: 151 YQILRGLKYIHSANV---LHRDLKPSNLLLNTTCDLKICDFGLARVAD-PDHDHTGFLTE 206
Query: 498 AQGTMGYLDPEYYRNFQLTDKS-DVYSFGVVLLELLTSK 535
T Y PE N + KS D++S G +L E+L+++
Sbjct: 207 YVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 245
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 97/214 (45%), Gaps = 35/214 (16%)
Query: 338 IGTGGFGEVFKGILDDGTV-TAIKR-AKLGNTKGTDLVLNEVRILCQVNHRSLVRLLGCC 395
IG G +G V + V AIK+ + + L E++IL + H +++ +
Sbjct: 31 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 90
Query: 396 ----------VELDQTLM---IYEYIPNGTLFDHLHCDFTGKWPPLPWHLRLVIAHQIAE 442
V + Q LM +Y+ + L + C F +QI
Sbjct: 91 RAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFL---------------YQILR 135
Query: 443 GLTYLHSAAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDSHIFTTAQGTM 502
GL Y+HSA V HRD+K SN+LL+ + K+ DFGL+R+ + + + + T T
Sbjct: 136 GLKYIHSANV---LHRDLKPSNLLLNTTCDLKICDFGLARVAD-PDHDHTGFLTEYVATR 191
Query: 503 GYLDPEYYRNFQLTDKS-DVYSFGVVLLELLTSK 535
Y PE N + KS D++S G +L E+L+++
Sbjct: 192 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|2IWI|A Chain A, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2IWI|B Chain B, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
Length = 312
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 77/284 (27%), Positives = 116/284 (40%), Gaps = 54/284 (19%)
Query: 337 LIGTGGFGEVFKG-ILDDGTVTAIK----RAKLGNTKGTDLVLN--EVRILCQVN----H 385
L+G GGFG VF G L D AIK LG + +D V EV +L +V H
Sbjct: 38 LLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGGH 97
Query: 386 RSLVRLLGCCVELDQTLMIYEY-IPNGTLFDHLHCDFTGKWPPLPWHLRLVIAHQIAEGL 444
++RLL + +++ E +P LFD++ T K P R Q+ +
Sbjct: 98 PGVIRLLDWFETQEGFMLVLERPLPAQDLFDYI----TEKGPLGEGPSRCFFG-QVVAAI 152
Query: 445 TYLHSAAVPPIYHRDVKSSNILLDEKLN-AKVSDFGLSRLVERTETNDSHIFTTAQGTMG 503
+ HS V HRD+K NIL+D + AK+ DFG L+ +T GT
Sbjct: 153 QHCHSRGV---VHRDIKDENILIDLRRGCAKLIDFGSGALLH------DEPYTDFDGTRV 203
Query: 504 YLDPEYYRNFQLTD-KSDVYSFGVVLLELLTSKKAIDFNREEENVNLVVYMKKIMDEERL 562
Y PE+ Q + V+S G++L +++ I F R++E
Sbjct: 204 YSPPEWISRHQYHALPATVWSLGILLYDMVCGD--IPFERDQE----------------- 244
Query: 563 MEVVDPVLKERATHLDLETMKALGLLAASCLDERRQNRPSMKEV 606
+ E H L CL + +RPS++E+
Sbjct: 245 -------ILEAELHFPAHVSPDCCALIRRCLAPKPSSRPSLEEI 281
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 37/99 (37%), Positives = 58/99 (58%), Gaps = 5/99 (5%)
Query: 438 HQIAEGLTYLHSAAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDSHIFTT 497
+QI GL Y+HSA V HRD+K SN+LL+ + K+ DFGL+R+ + + + + T
Sbjct: 139 YQILRGLKYIHSANV---LHRDLKPSNLLLNTTCDLKICDFGLARVAD-PDHDHTGFLTE 194
Query: 498 AQGTMGYLDPEYYRNFQLTDKS-DVYSFGVVLLELLTSK 535
T Y PE N + KS D++S G +L E+L+++
Sbjct: 195 YVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 233
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 37/99 (37%), Positives = 58/99 (58%), Gaps = 5/99 (5%)
Query: 438 HQIAEGLTYLHSAAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDSHIFTT 497
+QI GL Y+HSA V HRD+K SN+LL+ + K+ DFGL+R+ + + + + T
Sbjct: 131 YQILRGLKYIHSANV---LHRDLKPSNLLLNTTCDLKICDFGLARVAD-PDHDHTGFLTE 186
Query: 498 AQGTMGYLDPEYYRNFQLTDKS-DVYSFGVVLLELLTSK 535
T Y PE N + KS D++S G +L E+L+++
Sbjct: 187 YVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 66/251 (26%), Positives = 108/251 (43%), Gaps = 45/251 (17%)
Query: 311 KAAGKSARIFTGKEIRRATNNFSKDNL----------------IGTGGFGEVFKGI-LDD 353
K AG +A FT R T F + L +G+G +G V +
Sbjct: 18 KKAGSAAAPFTMSHKERPT--FYRQELNKTIWEVPERYQTLSPVGSGAYGSVCSSYDVKS 75
Query: 354 GTVTAIKRAK--LGNTKGTDLVLNEVRILCQVNHRSLVRLL-----GCCVELDQTLMIYE 406
G A+K+ + E+R+L + H +++ LL +E + +
Sbjct: 76 GLKIAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPATSLEEFNDVYLVT 135
Query: 407 YIPNGTLFDHLHCD-FTGKWPPLPWHLRLVIAHQIAEGLTYLHSAAVPPIYHRDVKSSNI 465
++ L + + C T H++ +I +QI GL Y+HSA I HRD+K SN+
Sbjct: 136 HLMGADLNNIVKCQKLTDD------HVQFLI-YQILRGLKYIHSAD---IIHRDLKPSNL 185
Query: 466 LLDEKLNAKVSDFGLSRLVERTETNDSHIFTTAQGTMGYLDPEYYRNFQLTDKS-DVYSF 524
++E K+ DFGL+R T+D T T Y PE N+ + + D++S
Sbjct: 186 AVNEDCELKILDFGLAR-----HTDDE--MTGYVATRWYRAPEIMLNWMHYNMTVDIWSV 238
Query: 525 GVVLLELLTSK 535
G ++ ELLT +
Sbjct: 239 GCIMAELLTGR 249
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 37/99 (37%), Positives = 58/99 (58%), Gaps = 5/99 (5%)
Query: 438 HQIAEGLTYLHSAAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDSHIFTT 497
+QI GL Y+HSA V HRD+K SN+LL+ + K+ DFGL+R+ + + + + T
Sbjct: 133 YQILRGLKYIHSANV---LHRDLKPSNLLLNTTSDLKICDFGLARVAD-PDHDHTGFLTE 188
Query: 498 AQGTMGYLDPEYYRNFQLTDKS-DVYSFGVVLLELLTSK 535
T Y PE N + KS D++S G +L E+L+++
Sbjct: 189 YVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 227
>pdb|3PG1|A Chain A, Map Kinase Lmampk10 From Leishmania Major (1.95 Angs
Resolution)
Length = 362
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 61/238 (25%), Positives = 101/238 (42%), Gaps = 22/238 (9%)
Query: 311 KAAGKSARIFTGKEIRRATNNFSKDNLIGTGGFGEVFKGILDDGTVTAIKRAKLGNTKGT 370
+A G++A E+ + ++ I +G +G V G+ +G AIKR + G
Sbjct: 3 QAKGEAAMRDLIAELHAMQSPYTVQRFISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGR 62
Query: 371 DL-----------VLNEVRILCQVNHRSLVRLLGCCVELDQTLMIYEYIPNGTL-FDHLH 418
+ VL E+R+L +H +++ L V ++ M Y+ + D
Sbjct: 63 TVNILSDSFLCKRVLREIRLLNHFHHPNILGLRDIFVHFEEPAMHKLYLVTELMRTDLAQ 122
Query: 419 CDFTGKWPPLPWHLRLVIAHQIAEGLTYLHSAAVPPIYHRDVKSSNILLDEKLNAKVSDF 478
+ P H++ + H I GL LH A V HRD+ NILL + + + DF
Sbjct: 123 VIHDQRIVISPQHIQYFMYH-ILLGLHVLHEAGV---VHRDLHPGNILLADNNDITICDF 178
Query: 479 GLSRLVERTETNDSHIFTTAQGTMGYLDPEYYRNFQ-LTDKSDVYSFGVVLLELLTSK 535
L+R + + N +H T Y PE F+ T D++S G V+ E+ K
Sbjct: 179 NLAR-EDTADANKTHYVTHR----WYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRK 231
>pdb|3UIB|A Chain A, Map Kinase Lmampk10 From Leishmania Major In Complex With
Sb203580
Length = 362
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 61/238 (25%), Positives = 101/238 (42%), Gaps = 22/238 (9%)
Query: 311 KAAGKSARIFTGKEIRRATNNFSKDNLIGTGGFGEVFKGILDDGTVTAIKRAKLGNTKGT 370
+A G++A E+ + ++ I +G +G V G+ +G AIKR + G
Sbjct: 3 QAKGEAAMRDLIAELHAMQSPYTVQRFISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGR 62
Query: 371 DL-----------VLNEVRILCQVNHRSLVRLLGCCVELDQTLMIYEYIPNGTL-FDHLH 418
+ VL E+R+L +H +++ L V ++ M Y+ + D
Sbjct: 63 TVNILSDSFLCKRVLREIRLLNHFHHPNILGLRDIFVHFEEPAMHKLYLVTELMRTDLAQ 122
Query: 419 CDFTGKWPPLPWHLRLVIAHQIAEGLTYLHSAAVPPIYHRDVKSSNILLDEKLNAKVSDF 478
+ P H++ + H I GL LH A V HRD+ NILL + + + DF
Sbjct: 123 VIHDQRIVISPQHIQYFMYH-ILLGLHVLHEAGV---VHRDLHPGNILLADNNDITICDF 178
Query: 479 GLSRLVERTETNDSHIFTTAQGTMGYLDPEYYRNFQ-LTDKSDVYSFGVVLLELLTSK 535
L+R + + N +H T Y PE F+ T D++S G V+ E+ K
Sbjct: 179 NLAR-EDTADANKTHYVTHR----WYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRK 231
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 96/208 (46%), Gaps = 27/208 (12%)
Query: 338 IGTGGFGEVFKGI-LDDGTVTAIKRAK--LGNTKGTDLVLNEVRILCQVNHRSLVRLLGC 394
IG+G +G V G A+K+ + E+R+L + H +++ LL
Sbjct: 35 IGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 94
Query: 395 -----CVELDQTLMIYEYIPNGTLFDHLHCD-FTGKWPPLPWHLRLVIAHQIAEGLTYLH 448
+E + + ++ L + + C T H++ +I +QI GL Y+H
Sbjct: 95 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDD------HVQFLI-YQILRGLKYIH 147
Query: 449 SAAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDSHIFTTAQGTMGYLDPE 508
SA I HRD+K SN+ ++E K+ DFGL+R T+D T T Y PE
Sbjct: 148 SA---DIIHRDLKPSNLAVNEDXELKILDFGLAR-----HTDDE--MTGYVATRWYRAPE 197
Query: 509 YYRNFQLTDKS-DVYSFGVVLLELLTSK 535
N+ +++ D++S G ++ ELLT +
Sbjct: 198 IMLNWMHYNQTVDIWSVGCIMAELLTGR 225
>pdb|3MY0|A Chain A, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|B Chain B, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|C Chain C, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|D Chain D, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|E Chain E, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|F Chain F, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|G Chain G, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|H Chain H, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|I Chain I, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|J Chain J, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|K Chain K, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|L Chain L, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|M Chain M, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|N Chain N, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|O Chain O, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|P Chain P, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|Q Chain Q, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|R Chain R, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|S Chain S, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|T Chain T, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|U Chain U, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|V Chain V, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|W Chain W, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|X Chain X, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
Length = 305
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 91/211 (43%), Gaps = 27/211 (12%)
Query: 338 IGTGGFGEVFKGILDDGTVTAIKRAKLGNTKGTDLVLNEVRILCQV--NHRSLVRLLGCC 395
+G G +GEV++G+ +V K+ +++ E I V H +++ +
Sbjct: 16 VGKGRYGEVWRGLWHGESVAV----KIFSSRDEQSWFRETEIYNTVLLRHDNILGFIASD 71
Query: 396 V----ELDQTLMIYEYIPNGTLFDHLHCDFTGKWPPLPWHLRLVIAHQIAEGLTYLH--- 448
+ Q +I Y +G+L+D L L HL L +A A GL +LH
Sbjct: 72 MTSRNSSTQLWLITHYHEHGSLYDFLQRQ------TLEPHLALRLAVSAACGLAHLHVEI 125
Query: 449 --SAAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDSHIFTTAQGTMGYLD 506
+ P I HRD KS N+L+ L ++D GL+ + + GT Y+
Sbjct: 126 FGTQGKPAIAHRDFKSRNVLVKSNLQCCIADLGLAVMHSQGSDYLDIGNNPRVGTKRYMA 185
Query: 507 PEYYRN------FQLTDKSDVYSFGVVLLEL 531
PE F+ +D+++FG+VL E+
Sbjct: 186 PEVLDEQIRTDCFESYKWTDIWAFGLVLWEI 216
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 93/227 (40%), Gaps = 46/227 (20%)
Query: 327 RATNNFSKDNLIGTGGFGEVFKGILDDGTVTAIKRAKLGNTKGTDL-----VLNEVRILC 381
R T+++ +G G F V + + T T AK+ NTK + E RI
Sbjct: 28 RFTDDYQLFEELGKGAFSVVRRCV--KKTPTQEYAAKIINTKKLSARDHQKLEREARICR 85
Query: 382 QVNHRSLVRLLGCCVELDQTLMIYEYIPNGTLFDHL------------HCDFTGKWPPLP 429
+ H ++VRL E ++++ + G LF+ + HC
Sbjct: 86 LLKHPNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHC---------- 135
Query: 430 WHLRLVIAHQIAEGLTYLHSAAVPPIYHRDVKSSNILLDEKLNA---KVSDFGLSRLVER 486
HQI E + ++H I HRD+K N+LL K K++DFGL+ V+
Sbjct: 136 -------IHQILESVNHIHQH---DIVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQ- 184
Query: 487 TETNDSHIFTTAQGTMGYLDPEYYRNFQLTDKSDVYSFGVVLLELLT 533
+ + GT GYL PE R D+++ GV+L LL
Sbjct: 185 ---GEQQAWFGFAGTPGYLSPEVLRKDPYGKPVDIWACGVILYILLV 228
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 60/237 (25%), Positives = 101/237 (42%), Gaps = 26/237 (10%)
Query: 329 TNNFSKDNLIGTGGFGEVFKGI-LDDGTVTAIKRAKLGNTK-GTDL-VLNEVRILCQVNH 385
+ + K IG G FGEVFK G A+K+ + N K G + L E++IL + H
Sbjct: 17 VSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKH 76
Query: 386 RSLVRLLGCCVELDQ-----TLMIYEYIPNGTLFDHLHCDFTGKWPPLPWHLRLV----I 436
++V L+ C IY +FD D G + L +
Sbjct: 77 ENVVNLIEICRTKASPYNRCKASIY------LVFDFCEHDLAGLLSNVLVKFTLSEIKRV 130
Query: 437 AHQIAEGLTYLHSAAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDSHIFT 496
+ GL Y+H I HRD+K++N+L+ K++DFGL+R + + + +
Sbjct: 131 MQMLLNGLYYIHRNK---ILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYX 187
Query: 497 TAQGTMGYLDPEYY---RNFQLTDKSDVYSFGVVLLELLTSKKAIDFNREEENVNLV 550
T+ Y PE R++ D++ G ++ E+ T + N E+ + L+
Sbjct: 188 NRVVTLWYRPPELLLGERDY--GPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALI 242
>pdb|3P1A|A Chain A, Structure Of Human Membrane-Associated Tyrosine- And
Threonine- Specific Cdc2-Inhibitory Kinase Myt1 (Pkmyt1)
Length = 311
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 63/218 (28%), Positives = 97/218 (44%), Gaps = 42/218 (19%)
Query: 330 NNFSKDNLIGTGGFGEVFK-GILDDGTVTAIKRAKLGNTKGTDLVLNEVRILCQVNHRSL 388
+F + + +G G +GEVFK +DG + A+KR+ + +G + R L +V
Sbjct: 57 QSFQRLSRLGHGSYGEVFKVRSKEDGRLYAVKRS-MSPFRGPK---DRARKLAEVGSHEK 112
Query: 389 VRLLGCCVELDQTLMIYEYIPNGTLFDHL---------HCDFTGKWPPLP--W-HLR--- 433
V CCV L+Q + G L+ HC+ G P W +LR
Sbjct: 113 VGQHPCCVRLEQA-----WEEGGILYLQTELCGPSLQQHCEAWGASLPEAQVWGYLRDTL 167
Query: 434 LVIAHQIAEGLTYLHSAAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDSH 493
L +AH ++GL +L DVK +NI L + K+ DFGL LVE
Sbjct: 168 LALAHLHSQGLVHL-----------DVKPANIFLGPRGRCKLGDFGL--LVELGTAGAGE 214
Query: 494 IFTTAQGTMGYLDPEYYRNFQLTDKSDVYSFGVVLLEL 531
+ +G Y+ PE + T +DV+S G+ +LE+
Sbjct: 215 V---QEGDPRYMAPELLQGSYGT-AADVFSLGLTILEV 248
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 60/237 (25%), Positives = 101/237 (42%), Gaps = 26/237 (10%)
Query: 329 TNNFSKDNLIGTGGFGEVFKGI-LDDGTVTAIKRAKLGNTK-GTDL-VLNEVRILCQVNH 385
+ + K IG G FGEVFK G A+K+ + N K G + L E++IL + H
Sbjct: 16 VSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKH 75
Query: 386 RSLVRLLGCCVELDQTL-----MIYEYIPNGTLFDHLHCDFTGKWPPLPWHLRLV----I 436
++V L+ C IY +FD D G + L +
Sbjct: 76 ENVVNLIEICRTKASPYNRCKGSIY------LVFDFCEHDLAGLLSNVLVKFTLSEIKRV 129
Query: 437 AHQIAEGLTYLHSAAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDSHIFT 496
+ GL Y+H I HRD+K++N+L+ K++DFGL+R + + + +
Sbjct: 130 MQMLLNGLYYIHRNK---ILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYX 186
Query: 497 TAQGTMGYLDPEYY---RNFQLTDKSDVYSFGVVLLELLTSKKAIDFNREEENVNLV 550
T+ Y PE R++ D++ G ++ E+ T + N E+ + L+
Sbjct: 187 NRVVTLWYRPPELLLGERDY--GPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALI 241
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 60/237 (25%), Positives = 101/237 (42%), Gaps = 26/237 (10%)
Query: 329 TNNFSKDNLIGTGGFGEVFKGI-LDDGTVTAIKRAKLGNTK-GTDL-VLNEVRILCQVNH 385
+ + K IG G FGEVFK G A+K+ + N K G + L E++IL + H
Sbjct: 17 VSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKH 76
Query: 386 RSLVRLLGCCVELDQTL-----MIYEYIPNGTLFDHLHCDFTGKWPPLPWHLRLV----I 436
++V L+ C IY +FD D G + L +
Sbjct: 77 ENVVNLIEICRTKASPYNRCKGSIY------LVFDFCEHDLAGLLSNVLVKFTLSEIKRV 130
Query: 437 AHQIAEGLTYLHSAAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDSHIFT 496
+ GL Y+H I HRD+K++N+L+ K++DFGL+R + + + +
Sbjct: 131 MQMLLNGLYYIHRNK---ILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYX 187
Query: 497 TAQGTMGYLDPEYY---RNFQLTDKSDVYSFGVVLLELLTSKKAIDFNREEENVNLV 550
T+ Y PE R++ D++ G ++ E+ T + N E+ + L+
Sbjct: 188 NRVVTLWYRPPELLLGERDY--GPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALI 242
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 96/208 (46%), Gaps = 27/208 (12%)
Query: 338 IGTGGFGEVFKGI-LDDGTVTAIKRAK--LGNTKGTDLVLNEVRILCQVNHRSLVRLLGC 394
+G+G +G V G A+K+ + E+R+L + H +++ LL
Sbjct: 35 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 94
Query: 395 -----CVELDQTLMIYEYIPNGTLFDHLHCD-FTGKWPPLPWHLRLVIAHQIAEGLTYLH 448
+E + + ++ L + + C T H++ +I +QI GL Y+H
Sbjct: 95 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDD------HVQFLI-YQILRGLKYIH 147
Query: 449 SAAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDSHIFTTAQGTMGYLDPE 508
SA I HRD+K SN+ ++E K+ DFGL+R T+D T T Y PE
Sbjct: 148 SA---DIIHRDLKPSNLAVNEDXELKILDFGLAR-----HTDDE--MTGYVATRWYRAPE 197
Query: 509 YYRNFQLTDKS-DVYSFGVVLLELLTSK 535
N+ +++ D++S G ++ ELLT +
Sbjct: 198 IMLNWMHYNQTVDIWSVGCIMAELLTGR 225
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 94/208 (45%), Gaps = 26/208 (12%)
Query: 337 LIGTGGFGEV----FKGILDDGTVTAIKRAKLGNTKGTDLVLNEVRILCQVNHRSLVRLL 392
+IG G FGEV K + + + ++ + E I+ N +V+L
Sbjct: 82 VIGRGAFGEVQLVRHKASQKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLF 141
Query: 393 GCCVELDQTL-MIYEYIPNGTLFDHL-HCDFTGKWPPLPWHLRLVIAHQIAEGLTYLHSA 450
C + D+ L M+ EY+P G L + + + D KW ++ L +HS
Sbjct: 142 -CAFQDDKYLYMVMEYMPGGDLVNLMSNYDVPEKWAKF-------YTAEVVLALDAIHSM 193
Query: 451 AVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDSHIFTTAQGTMGYLDPEYY 510
+ HRDVK N+LLD+ + K++DFG ++ ET H TA GT Y+ PE
Sbjct: 194 G---LIHRDVKPDNMLLDKHGHLKLADFGTC--MKMDETGMVHC-DTAVGTPDYISPEVL 247
Query: 511 RNFQLTD-----KSDVYSFGVVLLELLT 533
++ Q D + D +S GV L E+L
Sbjct: 248 KS-QGGDGYYGRECDWWSVGVFLFEMLV 274
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 60/237 (25%), Positives = 101/237 (42%), Gaps = 26/237 (10%)
Query: 329 TNNFSKDNLIGTGGFGEVFKGI-LDDGTVTAIKRAKLGNTK-GTDL-VLNEVRILCQVNH 385
+ + K IG G FGEVFK G A+K+ + N K G + L E++IL + H
Sbjct: 17 VSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKH 76
Query: 386 RSLVRLLGCCVELDQTL-----MIYEYIPNGTLFDHLHCDFTGKWPPLPWHLRLV----I 436
++V L+ C IY +FD D G + L +
Sbjct: 77 ENVVNLIEICRTKASPYNRCKGSIY------LVFDFCEHDLAGLLSNVLVKFTLSEIKRV 130
Query: 437 AHQIAEGLTYLHSAAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDSHIFT 496
+ GL Y+H I HRD+K++N+L+ K++DFGL+R + + + +
Sbjct: 131 MQMLLNGLYYIHRNK---ILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYX 187
Query: 497 TAQGTMGYLDPEYY---RNFQLTDKSDVYSFGVVLLELLTSKKAIDFNREEENVNLV 550
T+ Y PE R++ D++ G ++ E+ T + N E+ + L+
Sbjct: 188 NRVVTLWYRPPELLLGERDY--GPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALI 242
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 96/208 (46%), Gaps = 27/208 (12%)
Query: 338 IGTGGFGEVFKGI-LDDGTVTAIKRAK--LGNTKGTDLVLNEVRILCQVNHRSLVRLLGC 394
+G+G +G V G A+K+ + E+R+L + H +++ LL
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 395 -----CVELDQTLMIYEYIPNGTLFDHLHCD-FTGKWPPLPWHLRLVIAHQIAEGLTYLH 448
+E + + ++ L + + C T H++ +I +QI GL Y+H
Sbjct: 90 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDD------HVQFLI-YQILRGLKYIH 142
Query: 449 SAAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDSHIFTTAQGTMGYLDPE 508
SA I HRD+K SN+ ++E K+ DFGL+R T+D T T Y PE
Sbjct: 143 SA---DIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDE--MTGXVATRWYRAPE 192
Query: 509 YYRNFQLTDKS-DVYSFGVVLLELLTSK 535
N+ +++ D++S G ++ ELLT +
Sbjct: 193 IMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 96/208 (46%), Gaps = 27/208 (12%)
Query: 338 IGTGGFGEVFKGI-LDDGTVTAIKRAK--LGNTKGTDLVLNEVRILCQVNHRSLVRLLGC 394
+G+G +G V G A+K+ + E+R+L + H +++ LL
Sbjct: 41 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 100
Query: 395 -----CVELDQTLMIYEYIPNGTLFDHLHCD-FTGKWPPLPWHLRLVIAHQIAEGLTYLH 448
+E + + ++ L + + C T H++ +I +QI GL Y+H
Sbjct: 101 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDD------HVQFLI-YQILRGLKYIH 153
Query: 449 SAAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDSHIFTTAQGTMGYLDPE 508
SA I HRD+K SN+ ++E K+ DFGL+R T+D T T Y PE
Sbjct: 154 SA---DIIHRDLKPSNLAVNEDXELKILDFGLAR-----HTDDE--MTGYVATRWYRAPE 203
Query: 509 YYRNFQLTDKS-DVYSFGVVLLELLTSK 535
N+ +++ D++S G ++ ELLT +
Sbjct: 204 IMLNWMHYNQTVDIWSVGCIMAELLTGR 231
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 96/208 (46%), Gaps = 27/208 (12%)
Query: 338 IGTGGFGEVFKGI-LDDGTVTAIKRAK--LGNTKGTDLVLNEVRILCQVNHRSLVRLLGC 394
+G+G +G V G A+K+ + E+R+L + H +++ LL
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 395 -----CVELDQTLMIYEYIPNGTLFDHLHCD-FTGKWPPLPWHLRLVIAHQIAEGLTYLH 448
+E + + ++ L + + C T H++ +I +QI GL Y+H
Sbjct: 90 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDD------HVQFLI-YQILRGLKYIH 142
Query: 449 SAAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDSHIFTTAQGTMGYLDPE 508
SA I HRD+K SN+ ++E K+ DFGL+R T+D T T Y PE
Sbjct: 143 SA---DIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDE--MTGYVATRWYRAPE 192
Query: 509 YYRNFQLTDKS-DVYSFGVVLLELLTSK 535
N+ +++ D++S G ++ ELLT +
Sbjct: 193 IMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3DLS|A Chain A, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|B Chain B, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|C Chain C, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|D Chain D, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|E Chain E, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|F Chain F, Crystal Structure Of Human Pas Kinase Bound To Adp
Length = 335
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 71/268 (26%), Positives = 121/268 (45%), Gaps = 38/268 (14%)
Query: 329 TNNFSKDNLIGTGGFGEVFKGILDDG----TVTAIKRAK------LGNTKGTDLVLNEVR 378
+ +S + +G+G FG V+ + + V IK+ K + + K + L E+
Sbjct: 23 SQKYSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTL-EIA 81
Query: 379 ILCQVNHRSLVRLLGCCVELDQTLMIYEYIPNGTLFDHLHCDFTGKWPPLPWHLRLVIAH 438
IL +V H +++++L ++ E +G+ D F + P L L I
Sbjct: 82 ILSRVEHANIIKVLDIFENQGFFQLVME--KHGSGLDLFA--FIDRHPRLDEPLASYIFR 137
Query: 439 QIAEGLTYLHSAAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDSHIFTTA 498
Q+ + YL + I HRD+K NI++ E K+ DFG + +ER +F T
Sbjct: 138 QLVSAVGYLR---LKDIIHRDIKDENIVIAEDFTIKLIDFGSAAYLER-----GKLFYTF 189
Query: 499 QGTMGYLDPEY-----YRNFQLTDKSDVYSFGVVLLELLTSKKAIDFNREEENVNLVVYM 553
GT+ Y PE YR +L +++S GV L L+ + F EE V ++
Sbjct: 190 CGTIEYCAPEVLMGNPYRGPEL----EMWSLGVTLYTLVFEENP--FCELEETVEAAIHP 243
Query: 554 KKIMDEERLMEVVDPVLK---ERATHLD 578
++ +E LM +V +L+ ER T L+
Sbjct: 244 PYLVSKE-LMSLVSGLLQPVPERRTTLE 270
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 87/207 (42%), Gaps = 16/207 (7%)
Query: 337 LIGTGGFGEVFK-GILDDGTVTA---IKRAKLGNTKGTDLVLNEVRILCQVNHRSLVRLL 392
+G GGF + F+ D V A + ++ L + + E+ I + H+ +V
Sbjct: 28 FLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFH 87
Query: 393 GCCVELDQTLMIYEYIPNGTLFDHLHCDFTGKWPPLPWHLRLVIAHQIAEGLTYLHSAAV 452
G + D ++ E +L + P ++LR QI G YLH V
Sbjct: 88 GFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLR-----QIVLGCQYLHRNRV 142
Query: 453 PPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDSHIFTTAQGTMGYLDPEYYRN 512
HRD+K N+ L+E L K+ DFGL+ VE D T GT Y+ PE
Sbjct: 143 ---IHRDLKLGNLFLNEDLEVKIGDFGLATKVE----YDGERKKTLCGTPNYIAPEVLSK 195
Query: 513 FQLTDKSDVYSFGVVLLELLTSKKAID 539
+ + DV+S G ++ LL K +
Sbjct: 196 KGHSFEVDVWSIGCIMYTLLVGKPPFE 222
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 96/208 (46%), Gaps = 27/208 (12%)
Query: 338 IGTGGFGEVFKGI-LDDGTVTAIKRAK--LGNTKGTDLVLNEVRILCQVNHRSLVRLLGC 394
+G+G +G V G A+K+ + E+R+L + H +++ LL
Sbjct: 53 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 112
Query: 395 -----CVELDQTLMIYEYIPNGTLFDHLHCD-FTGKWPPLPWHLRLVIAHQIAEGLTYLH 448
+E + + ++ L + + C T H++ +I +QI GL Y+H
Sbjct: 113 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDD------HVQFLI-YQILRGLKYIH 165
Query: 449 SAAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDSHIFTTAQGTMGYLDPE 508
SA I HRD+K SN+ ++E K+ DFGL+R T+D T T Y PE
Sbjct: 166 SA---DIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDE--MTGYVATRWYRAPE 215
Query: 509 YYRNFQLTDKS-DVYSFGVVLLELLTSK 535
N+ +++ D++S G ++ ELLT +
Sbjct: 216 IMLNWMHYNQTVDIWSVGCIMAELLTGR 243
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 94/214 (43%), Gaps = 35/214 (16%)
Query: 338 IGTGGFGEVFKGI--LDDGTVTAIKRAKLGNTKGTDLVLNEVRILCQVNHRSLVRLLGCC 395
IG G +G V L+ V K + + L E++IL + H +++ +
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 94
Query: 396 ----------VELDQTLM---IYEYIPNGTLFDHLHCDFTGKWPPLPWHLRLVIAHQIAE 442
V + Q LM +Y+ + L + C F +QI
Sbjct: 95 RAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFL---------------YQILR 139
Query: 443 GLTYLHSAAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDSHIFTTAQGTM 502
GL Y+HSA V HRD+K SN+LL+ + K+ DFGL+R+ + + + + T
Sbjct: 140 GLKYIHSANV---LHRDLKPSNLLLNTTCDLKICDFGLARVAD-PDHDHTGFLXEXVATR 195
Query: 503 GYLDPEYYRNFQLTDKS-DVYSFGVVLLELLTSK 535
Y PE N + KS D++S G +L E+L+++
Sbjct: 196 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 96/208 (46%), Gaps = 27/208 (12%)
Query: 338 IGTGGFGEVFKGI-LDDGTVTAIKRAK--LGNTKGTDLVLNEVRILCQVNHRSLVRLLGC 394
+G+G +G V G A+K+ + E+R+L + H +++ LL
Sbjct: 27 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 86
Query: 395 -----CVELDQTLMIYEYIPNGTLFDHLHCD-FTGKWPPLPWHLRLVIAHQIAEGLTYLH 448
+E + + ++ L + + C T H++ +I +QI GL Y+H
Sbjct: 87 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDD------HVQFLI-YQILRGLKYIH 139
Query: 449 SAAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDSHIFTTAQGTMGYLDPE 508
SA I HRD+K SN+ ++E K+ DFGL+R T+D T T Y PE
Sbjct: 140 SA---DIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDE--MTGYVATRWYRAPE 189
Query: 509 YYRNFQLTDKS-DVYSFGVVLLELLTSK 535
N+ +++ D++S G ++ ELLT +
Sbjct: 190 IMLNWMHYNQTVDIWSVGCIMAELLTGR 217
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 94/214 (43%), Gaps = 35/214 (16%)
Query: 338 IGTGGFGEVFKGI--LDDGTVTAIKRAKLGNTKGTDLVLNEVRILCQVNHRSLVRLLGCC 395
IG G +G V L+ V K + + L E++IL + H +++ +
Sbjct: 36 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 95
Query: 396 ----------VELDQTLM---IYEYIPNGTLFDHLHCDFTGKWPPLPWHLRLVIAHQIAE 442
V + Q LM +Y+ + L + C F +QI
Sbjct: 96 RAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFL---------------YQILR 140
Query: 443 GLTYLHSAAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDSHIFTTAQGTM 502
GL Y+HSA V HRD+K SN+LL+ + K+ DFGL+R+ + + + + T
Sbjct: 141 GLKYIHSANV---LHRDLKPSNLLLNTTCDLKICDFGLARVAD-PDHDHTGFLXEXVATR 196
Query: 503 GYLDPEYYRNFQLTDKS-DVYSFGVVLLELLTSK 535
Y PE N + KS D++S G +L E+L+++
Sbjct: 197 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 230
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 96/208 (46%), Gaps = 27/208 (12%)
Query: 338 IGTGGFGEVFKGI-LDDGTVTAIKRAK--LGNTKGTDLVLNEVRILCQVNHRSLVRLLGC 394
+G+G +G V G A+K+ + E+R+L + H +++ LL
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 395 -----CVELDQTLMIYEYIPNGTLFDHLHCD-FTGKWPPLPWHLRLVIAHQIAEGLTYLH 448
+E + + ++ L + + C T H++ +I +QI GL Y+H
Sbjct: 90 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDD------HVQFLI-YQILRGLKYIH 142
Query: 449 SAAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDSHIFTTAQGTMGYLDPE 508
SA I HRD+K SN+ ++E K+ DFGL+R T+D T T Y PE
Sbjct: 143 SA---DIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDE--MTGYVATRWYRAPE 192
Query: 509 YYRNFQLTDKS-DVYSFGVVLLELLTSK 535
N+ +++ D++S G ++ ELLT +
Sbjct: 193 IMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 88/207 (42%), Gaps = 19/207 (9%)
Query: 338 IGTGGFGEV-FKGILDDGTVTAIKRAKLGNTKGTDL---VLNEVRILCQVNHRSLVRLLG 393
+G G FG+V A+K K +D+ V E+ L + H +++L
Sbjct: 17 LGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHIIKLYD 76
Query: 394 CCVELDQTLMIYEYIPNGTLFDHLHCDFTGKWPPLPWHLRLVIAHQIAEGLTYLHSAAVP 453
+M+ EY G LFD++ K R QI + Y H
Sbjct: 77 VITTPTDIVMVIEY-AGGELFDYI---VEKKRMTEDEGRRFF--QQIICAIEYCHRHK-- 128
Query: 454 PIYHRDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDSHIFTTAQGTMGYLDPEYYR-N 512
I HRD+K N+LLD+ LN K++DFGLS ++ D + T+ G+ Y PE
Sbjct: 129 -IVHRDLKPENLLLDDNLNVKIADFGLSNIM-----TDGNFLKTSCGSPNYAAPEVINGK 182
Query: 513 FQLTDKSDVYSFGVVLLELLTSKKAID 539
+ DV+S G+VL +L + D
Sbjct: 183 LYAGPEVDVWSCGIVLYVMLVGRLPFD 209
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 96/208 (46%), Gaps = 27/208 (12%)
Query: 338 IGTGGFGEVFKGI-LDDGTVTAIKRAK--LGNTKGTDLVLNEVRILCQVNHRSLVRLLGC 394
+G+G +G V G A+K+ + E+R+L + H +++ LL
Sbjct: 32 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 91
Query: 395 -----CVELDQTLMIYEYIPNGTLFDHLHCD-FTGKWPPLPWHLRLVIAHQIAEGLTYLH 448
+E + + ++ L + + C T H++ +I +QI GL Y+H
Sbjct: 92 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDD------HVQFLI-YQILRGLKYIH 144
Query: 449 SAAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDSHIFTTAQGTMGYLDPE 508
SA I HRD+K SN+ ++E K+ DFGL+R T+D T T Y PE
Sbjct: 145 SA---DIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDE--MTGYVATRWYRAPE 194
Query: 509 YYRNFQLTDKS-DVYSFGVVLLELLTSK 535
N+ +++ D++S G ++ ELLT +
Sbjct: 195 IMLNWMHYNQTVDIWSVGCIMAELLTGR 222
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 96/208 (46%), Gaps = 27/208 (12%)
Query: 338 IGTGGFGEVFKGI-LDDGTVTAIKRAK--LGNTKGTDLVLNEVRILCQVNHRSLVRLLGC 394
+G+G +G V G A+K+ + E+R+L + H +++ LL
Sbjct: 37 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 96
Query: 395 -----CVELDQTLMIYEYIPNGTLFDHLHCD-FTGKWPPLPWHLRLVIAHQIAEGLTYLH 448
+E + + ++ L + + C T H++ +I +QI GL Y+H
Sbjct: 97 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDD------HVQFLI-YQILRGLKYIH 149
Query: 449 SAAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDSHIFTTAQGTMGYLDPE 508
SA I HRD+K SN+ ++E K+ DFGL+R T+D T T Y PE
Sbjct: 150 SA---DIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDE--MTGYVATRWYRAPE 199
Query: 509 YYRNFQLTDKS-DVYSFGVVLLELLTSK 535
N+ +++ D++S G ++ ELLT +
Sbjct: 200 IMLNWMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 96/208 (46%), Gaps = 27/208 (12%)
Query: 338 IGTGGFGEVFKGI-LDDGTVTAIKRAK--LGNTKGTDLVLNEVRILCQVNHRSLVRLLGC 394
+G+G +G V G A+K+ + E+R+L + H +++ LL
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 395 -----CVELDQTLMIYEYIPNGTLFDHLHCD-FTGKWPPLPWHLRLVIAHQIAEGLTYLH 448
+E + + ++ L + + C T H++ +I +QI GL Y+H
Sbjct: 90 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDD------HVQFLI-YQILRGLKYIH 142
Query: 449 SAAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDSHIFTTAQGTMGYLDPE 508
SA I HRD+K SN+ ++E K+ DFGL+R T+D T T Y PE
Sbjct: 143 SA---DIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDE--MTGYVATRWYRAPE 192
Query: 509 YYRNFQLTDKS-DVYSFGVVLLELLTSK 535
N+ +++ D++S G ++ ELLT +
Sbjct: 193 IMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 96/208 (46%), Gaps = 27/208 (12%)
Query: 338 IGTGGFGEVFKGI-LDDGTVTAIKRAK--LGNTKGTDLVLNEVRILCQVNHRSLVRLLGC 394
+G+G +G V G A+K+ + E+R+L + H +++ LL
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 395 -----CVELDQTLMIYEYIPNGTLFDHLHCD-FTGKWPPLPWHLRLVIAHQIAEGLTYLH 448
+E + + ++ L + + C T H++ +I +QI GL Y+H
Sbjct: 90 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDD------HVQFLI-YQILRGLKYIH 142
Query: 449 SAAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDSHIFTTAQGTMGYLDPE 508
SA I HRD+K SN+ ++E K+ DFGL+R T+D T T Y PE
Sbjct: 143 SA---DIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDE--MTGYVATRWYRAPE 192
Query: 509 YYRNFQLTDKS-DVYSFGVVLLELLTSK 535
N+ +++ D++S G ++ ELLT +
Sbjct: 193 IMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 96/208 (46%), Gaps = 27/208 (12%)
Query: 338 IGTGGFGEVFKGI-LDDGTVTAIKRAK--LGNTKGTDLVLNEVRILCQVNHRSLVRLLGC 394
+G+G +G V G A+K+ + E+R+L + H +++ LL
Sbjct: 30 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 395 -----CVELDQTLMIYEYIPNGTLFDHLHCD-FTGKWPPLPWHLRLVIAHQIAEGLTYLH 448
+E + + ++ L + + C T H++ +I +QI GL Y+H
Sbjct: 90 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDD------HVQFLI-YQILRGLKYIH 142
Query: 449 SAAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDSHIFTTAQGTMGYLDPE 508
SA I HRD+K SN+ ++E K+ DFGL+R T+D T T Y PE
Sbjct: 143 SA---DIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDE--MTGYVATRWYRAPE 192
Query: 509 YYRNFQLTDKS-DVYSFGVVLLELLTSK 535
N+ +++ D++S G ++ ELLT +
Sbjct: 193 IMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 96/208 (46%), Gaps = 27/208 (12%)
Query: 338 IGTGGFGEVFKGI-LDDGTVTAIKRAK--LGNTKGTDLVLNEVRILCQVNHRSLVRLLGC 394
+G+G +G V G A+K+ + E+R+L + H +++ LL
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 395 -----CVELDQTLMIYEYIPNGTLFDHLHCD-FTGKWPPLPWHLRLVIAHQIAEGLTYLH 448
+E + + ++ L + + C T H++ +I +QI GL Y+H
Sbjct: 90 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDD------HVQFLI-YQILRGLKYIH 142
Query: 449 SAAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDSHIFTTAQGTMGYLDPE 508
SA I HRD+K SN+ ++E K+ DFGL+R T+D T T Y PE
Sbjct: 143 SA---DIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDE--MTGYVATRWYRAPE 192
Query: 509 YYRNFQLTDKS-DVYSFGVVLLELLTSK 535
N+ +++ D++S G ++ ELLT +
Sbjct: 193 IMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 87/207 (42%), Gaps = 16/207 (7%)
Query: 337 LIGTGGFGEVFK-GILDDGTVTA---IKRAKLGNTKGTDLVLNEVRILCQVNHRSLVRLL 392
+G GGF + F+ D V A + ++ L + + E+ I + H+ +V
Sbjct: 24 FLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFH 83
Query: 393 GCCVELDQTLMIYEYIPNGTLFDHLHCDFTGKWPPLPWHLRLVIAHQIAEGLTYLHSAAV 452
G + D ++ E +L + P ++LR QI G YLH V
Sbjct: 84 GFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLR-----QIVLGCQYLHRNRV 138
Query: 453 PPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDSHIFTTAQGTMGYLDPEYYRN 512
HRD+K N+ L+E L K+ DFGL+ VE D T GT Y+ PE
Sbjct: 139 ---IHRDLKLGNLFLNEDLEVKIGDFGLATKVE----YDGERKKTLCGTPNYIAPEVLSK 191
Query: 513 FQLTDKSDVYSFGVVLLELLTSKKAID 539
+ + DV+S G ++ LL K +
Sbjct: 192 KGHSFEVDVWSIGCIMYTLLVGKPPFE 218
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 96/208 (46%), Gaps = 27/208 (12%)
Query: 338 IGTGGFGEVFKGI-LDDGTVTAIKRAK--LGNTKGTDLVLNEVRILCQVNHRSLVRLLGC 394
+G+G +G V G A+K+ + E+R+L + H +++ LL
Sbjct: 26 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 85
Query: 395 -----CVELDQTLMIYEYIPNGTLFDHLHCD-FTGKWPPLPWHLRLVIAHQIAEGLTYLH 448
+E + + ++ L + + C T H++ +I +QI GL Y+H
Sbjct: 86 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDD------HVQFLI-YQILRGLKYIH 138
Query: 449 SAAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDSHIFTTAQGTMGYLDPE 508
SA I HRD+K SN+ ++E K+ DFGL+R T+D T T Y PE
Sbjct: 139 SA---DIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDE--MTGYVATRWYRAPE 188
Query: 509 YYRNFQLTDKS-DVYSFGVVLLELLTSK 535
N+ +++ D++S G ++ ELLT +
Sbjct: 189 IMLNWMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 96/208 (46%), Gaps = 27/208 (12%)
Query: 338 IGTGGFGEVFKGI-LDDGTVTAIKRAK--LGNTKGTDLVLNEVRILCQVNHRSLVRLLGC 394
+G+G +G V G A+K+ + E+R+L + H +++ LL
Sbjct: 40 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 99
Query: 395 -----CVELDQTLMIYEYIPNGTLFDHLHCD-FTGKWPPLPWHLRLVIAHQIAEGLTYLH 448
+E + + ++ L + + C T H++ +I +QI GL Y+H
Sbjct: 100 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDD------HVQFLI-YQILRGLKYIH 152
Query: 449 SAAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDSHIFTTAQGTMGYLDPE 508
SA I HRD+K SN+ ++E K+ DFGL+R T+D T T Y PE
Sbjct: 153 SA---DIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDE--MTGYVATRWYRAPE 202
Query: 509 YYRNFQLTDKS-DVYSFGVVLLELLTSK 535
N+ +++ D++S G ++ ELLT +
Sbjct: 203 IMLNWMHYNQTVDIWSVGCIMAELLTGR 230
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 96/208 (46%), Gaps = 27/208 (12%)
Query: 338 IGTGGFGEVFKGI-LDDGTVTAIKRAK--LGNTKGTDLVLNEVRILCQVNHRSLVRLLGC 394
+G+G +G V G A+K+ + E+R+L + H +++ LL
Sbjct: 42 VGSGAYGSVCAAFDTKTGLRVAVKKLSKPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 101
Query: 395 -----CVELDQTLMIYEYIPNGTLFDHLHCD-FTGKWPPLPWHLRLVIAHQIAEGLTYLH 448
+E + + ++ L + + C T H++ +I +QI GL Y+H
Sbjct: 102 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDD------HVQFLI-YQILRGLKYIH 154
Query: 449 SAAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDSHIFTTAQGTMGYLDPE 508
SA I HRD+K SN+ ++E K+ DFGL+R T+D T T Y PE
Sbjct: 155 SA---DIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDE--MTGYVATRWYRAPE 204
Query: 509 YYRNFQLTDKS-DVYSFGVVLLELLTSK 535
N+ +++ D++S G ++ ELLT +
Sbjct: 205 IMLNWMHYNQTVDIWSVGCIMAELLTGR 232
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 96/208 (46%), Gaps = 27/208 (12%)
Query: 338 IGTGGFGEVFKGI-LDDGTVTAIKRAK--LGNTKGTDLVLNEVRILCQVNHRSLVRLLGC 394
+G+G +G V G A+K+ + E+R+L + H +++ LL
Sbjct: 41 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 100
Query: 395 -----CVELDQTLMIYEYIPNGTLFDHLHCD-FTGKWPPLPWHLRLVIAHQIAEGLTYLH 448
+E + + ++ L + + C T H++ +I +QI GL Y+H
Sbjct: 101 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDD------HVQFLI-YQILRGLKYIH 153
Query: 449 SAAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDSHIFTTAQGTMGYLDPE 508
SA I HRD+K SN+ ++E K+ DFGL+R T+D T T Y PE
Sbjct: 154 SA---DIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDE--MTGYVATRWYRAPE 203
Query: 509 YYRNFQLTDKS-DVYSFGVVLLELLTSK 535
N+ +++ D++S G ++ ELLT +
Sbjct: 204 IMLNWMHYNQTVDIWSVGCIMAELLTGR 231
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 96/208 (46%), Gaps = 27/208 (12%)
Query: 338 IGTGGFGEVFKGI-LDDGTVTAIKRAK--LGNTKGTDLVLNEVRILCQVNHRSLVRLLGC 394
+G+G +G V G A+K+ + E+R+L + H +++ LL
Sbjct: 35 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 94
Query: 395 -----CVELDQTLMIYEYIPNGTLFDHLHCD-FTGKWPPLPWHLRLVIAHQIAEGLTYLH 448
+E + + ++ L + + C T H++ +I +QI GL Y+H
Sbjct: 95 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDD------HVQFLI-YQILRGLKYIH 147
Query: 449 SAAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDSHIFTTAQGTMGYLDPE 508
SA I HRD+K SN+ ++E K+ DFGL+R T+D T T Y PE
Sbjct: 148 SA---DIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDE--MTGYVATRWYRAPE 197
Query: 509 YYRNFQLTDKS-DVYSFGVVLLELLTSK 535
N+ +++ D++S G ++ ELLT +
Sbjct: 198 IMLNWMHYNQTVDIWSVGCIMAELLTGR 225
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 93/203 (45%), Gaps = 19/203 (9%)
Query: 338 IGTGGFGEVFKGILDDGTVTAIKRAKLGNTKGTDLVLN----EVRILCQVNHRSLVRLLG 393
+G+G FG+V ++++ + + K N + + + E+ +L ++H +++++
Sbjct: 30 LGSGAFGDVH--LVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHPNIIKIFE 87
Query: 394 CCVELDQTLMIYEYIPNGTLFDHLHCDFTGKWPPLPWHLRLVIAHQIAEGLTYLHSAAVP 453
+ ++ E G L + + + L + Q+ L Y HS V
Sbjct: 88 VFEDYHNMYIVMETCEGGELLERI-VSAQARGKALSEGYVAELMKQMMNALAYFHSQHV- 145
Query: 454 PIYHRDVKSSNILLDE---KLNAKVSDFGLSRLVERTETNDSHIFTTAQGTMGYLDPEYY 510
H+D+K NIL + K+ DFGL+ L + E + T A GT Y+ PE +
Sbjct: 146 --VHKDLKPENILFQDTSPHSPIKIIDFGLAELFKSDEHS-----TNAAGTALYMAPEVF 198
Query: 511 RNFQLTDKSDVYSFGVVLLELLT 533
+ +T K D++S GVV+ LLT
Sbjct: 199 KR-DVTFKCDIWSAGVVMYFLLT 220
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 96/208 (46%), Gaps = 27/208 (12%)
Query: 338 IGTGGFGEVFKGI-LDDGTVTAIKRAK--LGNTKGTDLVLNEVRILCQVNHRSLVRLLGC 394
+G+G +G V G A+K+ + E+R+L + H +++ LL
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 395 -----CVELDQTLMIYEYIPNGTLFDHLHCD-FTGKWPPLPWHLRLVIAHQIAEGLTYLH 448
+E + + ++ L + + C T H++ +I +QI GL Y+H
Sbjct: 90 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDD------HVQFLI-YQILRGLKYIH 142
Query: 449 SAAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDSHIFTTAQGTMGYLDPE 508
SA I HRD+K SN+ ++E K+ DFGL+R T+D T T Y PE
Sbjct: 143 SA---DIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDE--MTGYVATRWYRAPE 192
Query: 509 YYRNFQLTDKS-DVYSFGVVLLELLTSK 535
N+ +++ D++S G ++ ELLT +
Sbjct: 193 IMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 96/208 (46%), Gaps = 27/208 (12%)
Query: 338 IGTGGFGEVFKGI-LDDGTVTAIKRAK--LGNTKGTDLVLNEVRILCQVNHRSLVRLLGC 394
+G+G +G V G A+K+ + E+R+L + H +++ LL
Sbjct: 36 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 95
Query: 395 -----CVELDQTLMIYEYIPNGTLFDHLHCD-FTGKWPPLPWHLRLVIAHQIAEGLTYLH 448
+E + + ++ L + + C T H++ +I +QI GL Y+H
Sbjct: 96 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDD------HVQFLI-YQILRGLKYIH 148
Query: 449 SAAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDSHIFTTAQGTMGYLDPE 508
SA I HRD+K SN+ ++E K+ DFGL+R T+D T T Y PE
Sbjct: 149 SA---DIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDE--MTGYVATRWYRAPE 198
Query: 509 YYRNFQLTDKS-DVYSFGVVLLELLTSK 535
N+ +++ D++S G ++ ELLT +
Sbjct: 199 IMLNWMHYNQTVDIWSVGCIMAELLTGR 226
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 96/208 (46%), Gaps = 27/208 (12%)
Query: 338 IGTGGFGEVFKGI-LDDGTVTAIKRAK--LGNTKGTDLVLNEVRILCQVNHRSLVRLLGC 394
+G+G +G V G A+K+ + E+R+L + H +++ LL
Sbjct: 42 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 101
Query: 395 -----CVELDQTLMIYEYIPNGTLFDHLHCD-FTGKWPPLPWHLRLVIAHQIAEGLTYLH 448
+E + + ++ L + + C T H++ +I +QI GL Y+H
Sbjct: 102 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDD------HVQFLI-YQILRGLKYIH 154
Query: 449 SAAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDSHIFTTAQGTMGYLDPE 508
SA I HRD+K SN+ ++E K+ DFGL+R T+D T T Y PE
Sbjct: 155 SA---DIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDE--MTGYVATRWYRAPE 204
Query: 509 YYRNFQLTDKS-DVYSFGVVLLELLTSK 535
N+ +++ D++S G ++ ELLT +
Sbjct: 205 IMLNWMHYNQTVDIWSVGCIMAELLTGR 232
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 96/208 (46%), Gaps = 27/208 (12%)
Query: 338 IGTGGFGEVFKGI-LDDGTVTAIKRAK--LGNTKGTDLVLNEVRILCQVNHRSLVRLLGC 394
+G+G +G V G A+K+ + E+R+L + H +++ LL
Sbjct: 50 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 109
Query: 395 -----CVELDQTLMIYEYIPNGTLFDHLHCD-FTGKWPPLPWHLRLVIAHQIAEGLTYLH 448
+E + + ++ L + + C T H++ +I +QI GL Y+H
Sbjct: 110 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDD------HVQFLI-YQILRGLKYIH 162
Query: 449 SAAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDSHIFTTAQGTMGYLDPE 508
SA I HRD+K SN+ ++E K+ DFGL+R T+D T T Y PE
Sbjct: 163 SA---DIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDE--MTGYVATRWYRAPE 212
Query: 509 YYRNFQLTDKS-DVYSFGVVLLELLTSK 535
N+ +++ D++S G ++ ELLT +
Sbjct: 213 IMLNWMHYNQTVDIWSVGCIMAELLTGR 240
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 96/208 (46%), Gaps = 27/208 (12%)
Query: 338 IGTGGFGEVFKGI-LDDGTVTAIKRAK--LGNTKGTDLVLNEVRILCQVNHRSLVRLLGC 394
+G+G +G V G A+K+ + E+R+L + H +++ LL
Sbjct: 42 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 101
Query: 395 -----CVELDQTLMIYEYIPNGTLFDHLHCD-FTGKWPPLPWHLRLVIAHQIAEGLTYLH 448
+E + + ++ L + + C T H++ +I +QI GL Y+H
Sbjct: 102 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDD------HVQFLI-YQILRGLKYIH 154
Query: 449 SAAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDSHIFTTAQGTMGYLDPE 508
SA I HRD+K SN+ ++E K+ DFGL+R T+D T T Y PE
Sbjct: 155 SA---DIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDE--MTGYVATRWYRAPE 204
Query: 509 YYRNFQLTDKS-DVYSFGVVLLELLTSK 535
N+ +++ D++S G ++ ELLT +
Sbjct: 205 IMLNWMHYNQTVDIWSVGCIMAELLTGR 232
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 96/208 (46%), Gaps = 27/208 (12%)
Query: 338 IGTGGFGEVFKGI-LDDGTVTAIKRAK--LGNTKGTDLVLNEVRILCQVNHRSLVRLLGC 394
+G+G +G V G A+K+ + E+R+L + H +++ LL
Sbjct: 35 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 94
Query: 395 -----CVELDQTLMIYEYIPNGTLFDHLHCD-FTGKWPPLPWHLRLVIAHQIAEGLTYLH 448
+E + + ++ L + + C T H++ +I +QI GL Y+H
Sbjct: 95 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDD------HVQFLI-YQILRGLKYIH 147
Query: 449 SAAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDSHIFTTAQGTMGYLDPE 508
SA I HRD+K SN+ ++E K+ DFGL+R T+D T T Y PE
Sbjct: 148 SA---DIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDE--MTGYVATRWYRAPE 197
Query: 509 YYRNFQLTDKS-DVYSFGVVLLELLTSK 535
N+ +++ D++S G ++ ELLT +
Sbjct: 198 IMLNWMHYNQTVDIWSVGCIMAELLTGR 225
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 96/208 (46%), Gaps = 27/208 (12%)
Query: 338 IGTGGFGEVFKGI-LDDGTVTAIKRAK--LGNTKGTDLVLNEVRILCQVNHRSLVRLLGC 394
+G+G +G V G A+K+ + E+R+L + H +++ LL
Sbjct: 29 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 88
Query: 395 -----CVELDQTLMIYEYIPNGTLFDHLHCD-FTGKWPPLPWHLRLVIAHQIAEGLTYLH 448
+E + + ++ L + + C T H++ +I +QI GL Y+H
Sbjct: 89 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDD------HVQFLI-YQILRGLKYIH 141
Query: 449 SAAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDSHIFTTAQGTMGYLDPE 508
SA I HRD+K SN+ ++E K+ DFGL+R T+D T T Y PE
Sbjct: 142 SA---DIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDE--MTGYVATRWYRAPE 191
Query: 509 YYRNFQLTDKS-DVYSFGVVLLELLTSK 535
N+ +++ D++S G ++ ELLT +
Sbjct: 192 IMLNWMHYNQTVDIWSVGCIMAELLTGR 219
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 96/208 (46%), Gaps = 27/208 (12%)
Query: 338 IGTGGFGEVFKGI-LDDGTVTAIKRAK--LGNTKGTDLVLNEVRILCQVNHRSLVRLLGC 394
+G+G +G V G A+K+ + E+R+L + H +++ LL
Sbjct: 27 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 86
Query: 395 -----CVELDQTLMIYEYIPNGTLFDHLHCD-FTGKWPPLPWHLRLVIAHQIAEGLTYLH 448
+E + + ++ L + + C T H++ +I +QI GL Y+H
Sbjct: 87 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDD------HVQFLI-YQILRGLKYIH 139
Query: 449 SAAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDSHIFTTAQGTMGYLDPE 508
SA I HRD+K SN+ ++E K+ DFGL+R T+D T T Y PE
Sbjct: 140 SA---DIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDE--MTGYVATRWYRAPE 189
Query: 509 YYRNFQLTDKS-DVYSFGVVLLELLTSK 535
N+ +++ D++S G ++ ELLT +
Sbjct: 190 IMLNWMHYNQTVDIWSVGCIMAELLTGR 217
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 96/208 (46%), Gaps = 27/208 (12%)
Query: 338 IGTGGFGEVFKGI-LDDGTVTAIKRAK--LGNTKGTDLVLNEVRILCQVNHRSLVRLLGC 394
+G+G +G V G A+K+ + E+R+L + H +++ LL
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 395 -----CVELDQTLMIYEYIPNGTLFDHLHCD-FTGKWPPLPWHLRLVIAHQIAEGLTYLH 448
+E + + ++ L + + C T H++ +I +QI GL Y+H
Sbjct: 90 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDD------HVQFLI-YQILRGLKYIH 142
Query: 449 SAAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDSHIFTTAQGTMGYLDPE 508
SA I HRD+K SN+ ++E K+ DFGL+R T+D T T Y PE
Sbjct: 143 SA---DIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDE--MTGYVATRWYRAPE 192
Query: 509 YYRNFQLTDKS-DVYSFGVVLLELLTSK 535
N+ +++ D++S G ++ ELLT +
Sbjct: 193 IMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 87/207 (42%), Gaps = 16/207 (7%)
Query: 337 LIGTGGFGEVFK-GILDDGTVTA---IKRAKLGNTKGTDLVLNEVRILCQVNHRSLVRLL 392
+G GGF + F+ D V A + ++ L + + E+ I + H+ +V
Sbjct: 24 FLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFH 83
Query: 393 GCCVELDQTLMIYEYIPNGTLFDHLHCDFTGKWPPLPWHLRLVIAHQIAEGLTYLHSAAV 452
G + D ++ E +L + P ++LR QI G YLH V
Sbjct: 84 GFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLR-----QIVLGCQYLHRNRV 138
Query: 453 PPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDSHIFTTAQGTMGYLDPEYYRN 512
HRD+K N+ L+E L K+ DFGL+ VE D T GT Y+ PE
Sbjct: 139 ---IHRDLKLGNLFLNEDLEVKIGDFGLATKVE----YDGERKKTLCGTPNYIAPEVLSK 191
Query: 513 FQLTDKSDVYSFGVVLLELLTSKKAID 539
+ + DV+S G ++ LL K +
Sbjct: 192 KGHSFEVDVWSIGCIMYTLLVGKPPFE 218
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 96/208 (46%), Gaps = 27/208 (12%)
Query: 338 IGTGGFGEVFKGI-LDDGTVTAIKRAK--LGNTKGTDLVLNEVRILCQVNHRSLVRLLGC 394
+G+G +G V G A+K+ + E+R+L + H +++ LL
Sbjct: 32 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 91
Query: 395 -----CVELDQTLMIYEYIPNGTLFDHLHCD-FTGKWPPLPWHLRLVIAHQIAEGLTYLH 448
+E + + ++ L + + C T H++ +I +QI GL Y+H
Sbjct: 92 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDD------HVQFLI-YQILRGLKYIH 144
Query: 449 SAAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDSHIFTTAQGTMGYLDPE 508
SA I HRD+K SN+ ++E K+ DFGL+R T+D T T Y PE
Sbjct: 145 SA---DIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDE--MTGYVATRWYRAPE 194
Query: 509 YYRNFQLTDKS-DVYSFGVVLLELLTSK 535
N+ +++ D++S G ++ ELLT +
Sbjct: 195 IMLNWMHYNQTVDIWSVGCIMAELLTGR 222
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 96/208 (46%), Gaps = 27/208 (12%)
Query: 338 IGTGGFGEVFKGI-LDDGTVTAIKRAK--LGNTKGTDLVLNEVRILCQVNHRSLVRLLGC 394
+G+G +G V G A+K+ + E+R+L + H +++ LL
Sbjct: 28 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 87
Query: 395 -----CVELDQTLMIYEYIPNGTLFDHLHCD-FTGKWPPLPWHLRLVIAHQIAEGLTYLH 448
+E + + ++ L + + C T H++ +I +QI GL Y+H
Sbjct: 88 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDD------HVQFLI-YQILRGLKYIH 140
Query: 449 SAAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDSHIFTTAQGTMGYLDPE 508
SA I HRD+K SN+ ++E K+ DFGL+R T+D T T Y PE
Sbjct: 141 SA---DIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDE--MTGYVATRWYRAPE 190
Query: 509 YYRNFQLTDKS-DVYSFGVVLLELLTSK 535
N+ +++ D++S G ++ ELLT +
Sbjct: 191 IMLNWMHYNQTVDIWSVGCIMAELLTGR 218
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 96/208 (46%), Gaps = 27/208 (12%)
Query: 338 IGTGGFGEVFKGI-LDDGTVTAIKRAK--LGNTKGTDLVLNEVRILCQVNHRSLVRLLGC 394
+G+G +G V G A+K+ + E+R+L + H +++ LL
Sbjct: 32 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 91
Query: 395 -----CVELDQTLMIYEYIPNGTLFDHLHCD-FTGKWPPLPWHLRLVIAHQIAEGLTYLH 448
+E + + ++ L + + C T H++ +I +QI GL Y+H
Sbjct: 92 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDD------HVQFLI-YQILRGLKYIH 144
Query: 449 SAAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDSHIFTTAQGTMGYLDPE 508
SA I HRD+K SN+ ++E K+ DFGL+R T+D T T Y PE
Sbjct: 145 SA---DIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDE--MTGYVATRWYRAPE 194
Query: 509 YYRNFQLTDKS-DVYSFGVVLLELLTSK 535
N+ +++ D++S G ++ ELLT +
Sbjct: 195 IMLNWMHYNQTVDIWSVGCIMAELLTGR 222
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 96/208 (46%), Gaps = 27/208 (12%)
Query: 338 IGTGGFGEVFKGI-LDDGTVTAIKRAK--LGNTKGTDLVLNEVRILCQVNHRSLVRLLGC 394
+G+G +G V G A+K+ + E+R+L + H +++ LL
Sbjct: 49 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 108
Query: 395 -----CVELDQTLMIYEYIPNGTLFDHLHCD-FTGKWPPLPWHLRLVIAHQIAEGLTYLH 448
+E + + ++ L + + C T H++ +I +QI GL Y+H
Sbjct: 109 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDD------HVQFLI-YQILRGLKYIH 161
Query: 449 SAAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDSHIFTTAQGTMGYLDPE 508
SA I HRD+K SN+ ++E K+ DFGL+R T+D T T Y PE
Sbjct: 162 SA---DIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDE--MTGYVATRWYRAPE 211
Query: 509 YYRNFQLTDKS-DVYSFGVVLLELLTSK 535
N+ +++ D++S G ++ ELLT +
Sbjct: 212 IMLNWMHYNQTVDIWSVGCIMAELLTGR 239
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 96/208 (46%), Gaps = 27/208 (12%)
Query: 338 IGTGGFGEVFKGI-LDDGTVTAIKRAK--LGNTKGTDLVLNEVRILCQVNHRSLVRLLGC 394
+G+G +G V G A+K+ + E+R+L + H +++ LL
Sbjct: 32 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 91
Query: 395 -----CVELDQTLMIYEYIPNGTLFDHLHCD-FTGKWPPLPWHLRLVIAHQIAEGLTYLH 448
+E + + ++ L + + C T H++ +I +QI GL Y+H
Sbjct: 92 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDD------HVQFLI-YQILRGLKYIH 144
Query: 449 SAAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDSHIFTTAQGTMGYLDPE 508
SA I HRD+K SN+ ++E K+ DFGL+R T+D T T Y PE
Sbjct: 145 SA---DIIHRDLKPSNLAVNEDSELKILDFGLAR-----HTDDE--MTGYVATRWYRAPE 194
Query: 509 YYRNFQLTDKS-DVYSFGVVLLELLTSK 535
N+ +++ D++S G ++ ELLT +
Sbjct: 195 IMLNWMHYNQTVDIWSVGCIMAELLTGR 222
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 96/208 (46%), Gaps = 27/208 (12%)
Query: 338 IGTGGFGEVFKGI-LDDGTVTAIKRAK--LGNTKGTDLVLNEVRILCQVNHRSLVRLLGC 394
+G+G +G V G A+K+ + E+R+L + H +++ LL
Sbjct: 26 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 85
Query: 395 -----CVELDQTLMIYEYIPNGTLFDHLHCD-FTGKWPPLPWHLRLVIAHQIAEGLTYLH 448
+E + + ++ L + + C T H++ +I +QI GL Y+H
Sbjct: 86 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDD------HVQFLI-YQILRGLKYIH 138
Query: 449 SAAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDSHIFTTAQGTMGYLDPE 508
SA I HRD+K SN+ ++E K+ DFGL+R T+D T T Y PE
Sbjct: 139 SA---DIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDE--MTGYVATRWYRAPE 188
Query: 509 YYRNFQLTDKS-DVYSFGVVLLELLTSK 535
N+ +++ D++S G ++ ELLT +
Sbjct: 189 IMLNWMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 96/208 (46%), Gaps = 27/208 (12%)
Query: 338 IGTGGFGEVFKGI-LDDGTVTAIKRAK--LGNTKGTDLVLNEVRILCQVNHRSLVRLLGC 394
+G+G +G V G A+K+ + E+R+L + H +++ LL
Sbjct: 49 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 108
Query: 395 -----CVELDQTLMIYEYIPNGTLFDHLHCD-FTGKWPPLPWHLRLVIAHQIAEGLTYLH 448
+E + + ++ L + + C T H++ +I +QI GL Y+H
Sbjct: 109 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDD------HVQFLI-YQILRGLKYIH 161
Query: 449 SAAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDSHIFTTAQGTMGYLDPE 508
SA I HRD+K SN+ ++E K+ DFGL+R T+D T T Y PE
Sbjct: 162 SA---DIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDE--MTGYVATRWYRAPE 211
Query: 509 YYRNFQLTDKS-DVYSFGVVLLELLTSK 535
N+ +++ D++S G ++ ELLT +
Sbjct: 212 IMLNWMHYNQTVDIWSVGCIMAELLTGR 239
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 96/208 (46%), Gaps = 27/208 (12%)
Query: 338 IGTGGFGEVFKGI-LDDGTVTAIKRAK--LGNTKGTDLVLNEVRILCQVNHRSLVRLLGC 394
+G+G +G V G A+K+ + E+R+L + H +++ LL
Sbjct: 50 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 109
Query: 395 -----CVELDQTLMIYEYIPNGTLFDHLHCD-FTGKWPPLPWHLRLVIAHQIAEGLTYLH 448
+E + + ++ L + + C T H++ +I +QI GL Y+H
Sbjct: 110 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDD------HVQFLI-YQILRGLKYIH 162
Query: 449 SAAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDSHIFTTAQGTMGYLDPE 508
SA I HRD+K SN+ ++E K+ DFGL+R T+D T T Y PE
Sbjct: 163 SA---DIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDE--MTGYVATRWYRAPE 212
Query: 509 YYRNFQLTDKS-DVYSFGVVLLELLTSK 535
N+ +++ D++S G ++ ELLT +
Sbjct: 213 IMLNWMHYNQTVDIWSVGCIMAELLTGR 240
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/224 (25%), Positives = 100/224 (44%), Gaps = 27/224 (12%)
Query: 322 GKEIRRATNNFSKDNLIGTGGFGEVFKGI-LDDGTVTAIKRAK--LGNTKGTDLVLNEVR 378
K I + + +G+G +G V G A+K+ + E+R
Sbjct: 10 AKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELR 69
Query: 379 ILCQVNHRSLVRLLGC-----CVELDQTLMIYEYIPNGTLFDHLHC-DFTGKWPPLPWHL 432
+L + H +++ LL +E + + ++ L + + C T H+
Sbjct: 70 LLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCAKLTDD------HV 123
Query: 433 RLVIAHQIAEGLTYLHSAAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDS 492
+ +I +QI GL Y+HSA I HRD+K SN+ ++E K+ DFGL+R T+D
Sbjct: 124 QFLI-YQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDE 174
Query: 493 HIFTTAQGTMGYLDPEYYRNFQLTDKS-DVYSFGVVLLELLTSK 535
T T Y PE N+ +++ D++S G ++ ELLT +
Sbjct: 175 --MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/106 (36%), Positives = 60/106 (56%), Gaps = 12/106 (11%)
Query: 431 HLRLVIAHQIAEGLTYLHSAAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVERTETN 490
H++ +I +QI GL Y+HSA I HRD+K SN+ ++E K+ DFGL+R T+
Sbjct: 126 HVQFLI-YQILRGLKYIHSA---DIIHRDLKPSNLAVNEDXELKILDFGLAR-----HTD 176
Query: 491 DSHIFTTAQGTMGYLDPEYYRNFQLTDKS-DVYSFGVVLLELLTSK 535
D T T Y PE N+ +++ D++S G ++ ELLT +
Sbjct: 177 DE--MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 96/208 (46%), Gaps = 27/208 (12%)
Query: 338 IGTGGFGEVFKGI-LDDGTVTAIKRAK--LGNTKGTDLVLNEVRILCQVNHRSLVRLLGC 394
+G+G +G V G A+K+ + E+R+L + H +++ LL
Sbjct: 36 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 95
Query: 395 -----CVELDQTLMIYEYIPNGTLFDHLHCD-FTGKWPPLPWHLRLVIAHQIAEGLTYLH 448
+E + + ++ L + + C T H++ +I +QI GL Y+H
Sbjct: 96 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDD------HVQFLI-YQILRGLKYIH 148
Query: 449 SAAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDSHIFTTAQGTMGYLDPE 508
SA I HRD+K SN+ ++E K+ DFGL+R T+D T T Y PE
Sbjct: 149 SA---DIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDE--MTGYVATRWYRAPE 198
Query: 509 YYRNFQLTDKS-DVYSFGVVLLELLTSK 535
N+ +++ D++S G ++ ELLT +
Sbjct: 199 IMLNWMHYNQTVDIWSVGCIMAELLTGR 226
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 93/202 (46%), Gaps = 21/202 (10%)
Query: 338 IGTGGFGEVFKGILDDGTVTAIKRAKLGNTK---GTDLVLNEVRILCQVNHRSLVRLLGC 394
+G+G FG V + + + + AK NT V NE+ I+ Q++H L+ L
Sbjct: 59 LGSGAFGVVHRCV--EKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLHDA 116
Query: 395 CVELDQTLMIYEYIPNGTLFDHLHC-DFTGKWPPLPWHLRLVIAHQIAEGLTYLHSAAVP 453
+ + ++I E++ G LFD + D+ + ++R Q EGL ++H +
Sbjct: 117 FEDKYEMVLILEFLSGGELFDRIAAEDYKMSEAEVINYMR-----QACEGLKHMHEHS-- 169
Query: 454 PIYHRDVKSSNILLDEKL--NAKVSDFGLSRLVERTETNDSHIFTTAQGTMGYLDPEYYR 511
I H D+K NI+ + K + K+ DFGL+ T+ N I T + PE
Sbjct: 170 -IVHLDIKPENIMCETKKASSVKIIDFGLA-----TKLNPDEIVKVTTATAEFAAPEIVD 223
Query: 512 NFQLTDKSDVYSFGVVLLELLT 533
+ +D+++ GV+ LL+
Sbjct: 224 REPVGFYTDMWAIGVLGYVLLS 245
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 96/208 (46%), Gaps = 27/208 (12%)
Query: 338 IGTGGFGEVFKGI-LDDGTVTAIKRAK--LGNTKGTDLVLNEVRILCQVNHRSLVRLLGC 394
+G+G +G V G A+K+ + E+R+L + H +++ LL
Sbjct: 36 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 95
Query: 395 -----CVELDQTLMIYEYIPNGTLFDHLHCD-FTGKWPPLPWHLRLVIAHQIAEGLTYLH 448
+E + + ++ L + + C T H++ +I +QI GL Y+H
Sbjct: 96 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDD------HVQFLI-YQILRGLKYIH 148
Query: 449 SAAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDSHIFTTAQGTMGYLDPE 508
SA I HRD+K SN+ ++E K+ DFGL+R T+D T T Y PE
Sbjct: 149 SA---DIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDE--MTGYVATRWYRAPE 198
Query: 509 YYRNFQLTDKS-DVYSFGVVLLELLTSK 535
N+ +++ D++S G ++ ELLT +
Sbjct: 199 IMLNWMHYNQTVDIWSVGCIMAELLTGR 226
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 96/208 (46%), Gaps = 27/208 (12%)
Query: 338 IGTGGFGEVFKGI-LDDGTVTAIKRAK--LGNTKGTDLVLNEVRILCQVNHRSLVRLLGC 394
+G+G +G V G A+K+ + E+R+L + H +++ LL
Sbjct: 36 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 95
Query: 395 -----CVELDQTLMIYEYIPNGTLFDHLHCD-FTGKWPPLPWHLRLVIAHQIAEGLTYLH 448
+E + + ++ L + + C T H++ +I +QI GL Y+H
Sbjct: 96 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDD------HVQFLI-YQILRGLKYIH 148
Query: 449 SAAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDSHIFTTAQGTMGYLDPE 508
SA I HRD+K SN+ ++E K+ DFGL+R T+D T T Y PE
Sbjct: 149 SA---DIIHRDLKPSNLAVNEDSELKILDFGLAR-----HTDDE--MTGYVATRWYRAPE 198
Query: 509 YYRNFQLTDKS-DVYSFGVVLLELLTSK 535
N+ +++ D++S G ++ ELLT +
Sbjct: 199 IMLNWMHYNQTVDIWSVGCIMAELLTGR 226
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/229 (24%), Positives = 99/229 (43%), Gaps = 40/229 (17%)
Query: 329 TNNFSKDNLIGTGGFGEVFKGILD-DGTVTAIKRAKLGNTKGTDL-VLNEVRILCQVNHR 386
+++F +L+G G +G V G + AIK+ + + L L E++IL H
Sbjct: 10 SSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHE 69
Query: 387 SLVRLLGCC----------VELDQTLM---IYEYIPNGTLFDHLHCDFTGKWPPLPWHLR 433
+++ + V + Q LM ++ I L D H++
Sbjct: 70 NIITIFNIQRPDSFENFNEVYIIQELMQTDLHRVISTQMLSDD--------------HIQ 115
Query: 434 LVIAHQIAEGLTYLHSAAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDSH 493
I +Q + LH + V HRD+K SN+L++ + KV DFGL+R+++ + ++S
Sbjct: 116 YFI-YQTLRAVKVLHGSNV---IHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSE 171
Query: 494 IFTTAQGTMGYLDPEYYR-------NFQLTDKSDVYSFGVVLLELLTSK 535
G Y+ +YR + + + DV+S G +L EL +
Sbjct: 172 PTGQQSGMTEYVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRR 220
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 93/206 (45%), Gaps = 20/206 (9%)
Query: 338 IGTGGFGEV-FKGILDDGTVTAIK---RAKLGNTKGTDLVLNEVRILCQVNHRSLVRLLG 393
IG G FG+V D + A+K + K V E++I+ + H LV L
Sbjct: 23 IGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEHPFLVNLWY 82
Query: 394 CCVELDQTLMIYEYIPNGTLFDHLHCDFTGKWPPLPWHLRLVIAHQIAEGLTYLHSAAVP 453
+ + M+ + + G L HL + K + +L I ++ L YL +
Sbjct: 83 SFQDEEDMFMVVDLLLGGDLRYHLQQNVHFKEETV----KLFIC-ELVMALDYLQNQR-- 135
Query: 454 PIYHRDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDSHIFTTAQGTMGYLDPEYYRNF 513
I HRD+K NILLDE + ++DF ++ ++ R ET TT GT Y+ PE + +
Sbjct: 136 -IIHRDMKPDNILLDEHGHVHITDFNIAAMLPR-ETQ----ITTMAGTKPYMAPEMFSSR 189
Query: 514 QLTDKS---DVYSFGVVLLELLTSKK 536
+ S D +S GV ELL ++
Sbjct: 190 KGAGYSFAVDWWSLGVTAYELLRGRR 215
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 56/217 (25%), Positives = 104/217 (47%), Gaps = 21/217 (9%)
Query: 324 EIRRATNNFSKDNLIGTGGFGEVFKGILDDGT--VTAIKRAKLGN-TKGTDLV----LNE 376
+++ + K + +G G F V+K D T + AIK+ KLG+ ++ D + L E
Sbjct: 4 DVKSRAKRYEKLDFLGEGQFATVYKA-RDKNTNQIVAIKKIKLGHRSEAKDGINRTALRE 62
Query: 377 VRILCQVNHRSLVRLLGCCVELDQTLMIYEYIPNGTLFDHLHCDFTGKWPPLPWHLRLVI 436
+++L +++H +++ LL ++++++ T + + D P H++ +
Sbjct: 63 IKLLQELSHPNIIGLLDAFGHKSNISLVFDFME--TDLEVIIKD--NSLVLTPSHIKAYM 118
Query: 437 AHQIAEGLTYLHSAAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDSHIFT 496
+ +GL YLH I HRD+K +N+LLDE K++DFGL++ H
Sbjct: 119 LMTL-QGLEYLHQHW---ILHRDLKPNNLLLDENGVLKLADFGLAKSFGSPNRAYXHQVV 174
Query: 497 TAQGTMGYLDPEYYRNFQLTDKS-DVYSFGVVLLELL 532
T Y PE ++ D+++ G +L ELL
Sbjct: 175 TRW----YRAPELLFGARMYGVGVDMWAVGCILAELL 207
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 95/208 (45%), Gaps = 27/208 (12%)
Query: 338 IGTGGFGEVFKGI-LDDGTVTAIKRAK--LGNTKGTDLVLNEVRILCQVNHRSLVRLLGC 394
+G+G +G V G A+K+ + E+R+L + H +++ LL
Sbjct: 37 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 96
Query: 395 -----CVELDQTLMIYEYIPNGTLFDHLHCD-FTGKWPPLPWHLRLVIAHQIAEGLTYLH 448
+E + + ++ L + + C T H++ +I +QI GL Y+H
Sbjct: 97 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDD------HVQFLI-YQILRGLKYIH 149
Query: 449 SAAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDSHIFTTAQGTMGYLDPE 508
SA I HRD+K SN+ ++E K+ DFGL+R T D T T Y PE
Sbjct: 150 SA---DIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTADE--MTGYVATRWYRAPE 199
Query: 509 YYRNFQLTDKS-DVYSFGVVLLELLTSK 535
N+ +++ D++S G ++ ELLT +
Sbjct: 200 IMLNWMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 39/106 (36%), Positives = 60/106 (56%), Gaps = 12/106 (11%)
Query: 431 HLRLVIAHQIAEGLTYLHSAAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVERTETN 490
H++ +I +QI GL Y+HSA I HRD+K SN+ ++E K+ DFGL+R T+
Sbjct: 126 HVQFLI-YQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTD 176
Query: 491 DSHIFTTAQGTMGYLDPEYYRNFQLTDKS-DVYSFGVVLLELLTSK 535
D T T Y PE N+ +++ D++S G ++ ELLT +
Sbjct: 177 DE--MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3TZM|A Chain A, Tgf-Beta Receptor Type 1 In Complex With Sb431542
Length = 309
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 99/215 (46%), Gaps = 35/215 (16%)
Query: 338 IGTGGFGEVFKGILDDGTVTAIKRAKLGNTKGTDLVLNEVRILCQV--NHRSLVRLLGCC 395
IG G FGEV++G V K+ +++ E I V H +++ +
Sbjct: 17 IGKGRFGEVWRGKWRGEEVAV----KIFSSREERSWFREAEIYQTVMLRHENILGFIAAD 72
Query: 396 VE----LDQTLMIYEYIPNGTLFDHLHCDFTGKWPPLPWHLRLVIAHQIAEGLTYLHSAA 451
+ Q ++ +Y +G+LFD+L+ +T + + +A A GL +LH
Sbjct: 73 NKDNGTWTQLWLVSDYHEHGSLFDYLN-RYTVTVEGM-----IKLALSTASGLAHLHMEI 126
Query: 452 V-----PPIYHRDVKSSNILLDEKLNAKVSDFGLS-RLVERTETND---SHIFTTAQGTM 502
V P I HRD+KS NIL+ + ++D GL+ R T+T D +H GT
Sbjct: 127 VGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRV----GTK 182
Query: 503 GYLDPEY------YRNFQLTDKSDVYSFGVVLLEL 531
Y+ PE ++F+ ++D+Y+ G+V E+
Sbjct: 183 RYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEI 217
>pdb|1RW8|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With Atp
Site Inhibitor
Length = 301
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 99/215 (46%), Gaps = 35/215 (16%)
Query: 338 IGTGGFGEVFKGILDDGTVTAIKRAKLGNTKGTDLVLNEVRILCQV--NHRSLVRLLGCC 395
IG G FGEV++G V K+ +++ E I V H +++ +
Sbjct: 12 IGKGRFGEVWRGKWRGEEVAV----KIFSSREERSWFREAEIYQTVMLRHENILGFIAAD 67
Query: 396 VE----LDQTLMIYEYIPNGTLFDHLHCDFTGKWPPLPWHLRLVIAHQIAEGLTYLHSAA 451
+ Q ++ +Y +G+LFD+L+ +T + + +A A GL +LH
Sbjct: 68 NKDNGTWTQLWLVSDYHEHGSLFDYLN-RYTVTVEGM-----IKLALSTASGLAHLHMEI 121
Query: 452 V-----PPIYHRDVKSSNILLDEKLNAKVSDFGLS-RLVERTETND---SHIFTTAQGTM 502
V P I HRD+KS NIL+ + ++D GL+ R T+T D +H GT
Sbjct: 122 VGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRV----GTK 177
Query: 503 GYLDPEY------YRNFQLTDKSDVYSFGVVLLEL 531
Y+ PE ++F+ ++D+Y+ G+V E+
Sbjct: 178 RYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEI 212
>pdb|1VJY|A Chain A, Crystal Structure Of A Naphthyridine Inhibitor Of Human
Tgf- Beta Type I Receptor
pdb|3GXL|A Chain A, Alk-5 Kinase Complex With Gw857175
pdb|3HMM|A Chain A, Structure Of Alk5 + Gw855857
Length = 303
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 99/215 (46%), Gaps = 35/215 (16%)
Query: 338 IGTGGFGEVFKGILDDGTVTAIKRAKLGNTKGTDLVLNEVRILCQV--NHRSLVRLLGCC 395
IG G FGEV++G V K+ +++ E I V H +++ +
Sbjct: 11 IGKGRFGEVWRGKWRGEEVAV----KIFSSREERSWFREAEIYQTVMLRHENILGFIAAD 66
Query: 396 VE----LDQTLMIYEYIPNGTLFDHLHCDFTGKWPPLPWHLRLVIAHQIAEGLTYLHSAA 451
+ Q ++ +Y +G+LFD+L+ +T + + +A A GL +LH
Sbjct: 67 NKDNGTWTQLWLVSDYHEHGSLFDYLN-RYTVTVEGM-----IKLALSTASGLAHLHMEI 120
Query: 452 V-----PPIYHRDVKSSNILLDEKLNAKVSDFGLS-RLVERTETND---SHIFTTAQGTM 502
V P I HRD+KS NIL+ + ++D GL+ R T+T D +H GT
Sbjct: 121 VGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRV----GTK 176
Query: 503 GYLDPEY------YRNFQLTDKSDVYSFGVVLLEL 531
Y+ PE ++F+ ++D+Y+ G+V E+
Sbjct: 177 RYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEI 211
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 95/208 (45%), Gaps = 27/208 (12%)
Query: 338 IGTGGFGEVFKGI-LDDGTVTAIKRAK--LGNTKGTDLVLNEVRILCQVNHRSLVRLLGC 394
+G+G +G V G A+K+ + E+R+L + H +++ LL
Sbjct: 37 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 96
Query: 395 -----CVELDQTLMIYEYIPNGTLFDHLHCD-FTGKWPPLPWHLRLVIAHQIAEGLTYLH 448
+E + + ++ L + + C T H++ +I +QI GL Y+H
Sbjct: 97 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDD------HVQFLI-YQILRGLKYIH 149
Query: 449 SAAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDSHIFTTAQGTMGYLDPE 508
SA I HRD+K SN+ ++E K+ DFGL+R T D T T Y PE
Sbjct: 150 SA---DIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTADE--MTGYVATRWYRAPE 199
Query: 509 YYRNFQLTDKS-DVYSFGVVLLELLTSK 535
N+ +++ D++S G ++ ELLT +
Sbjct: 200 IMLNWMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 95/208 (45%), Gaps = 27/208 (12%)
Query: 338 IGTGGFGEVFKGI-LDDGTVTAIKRAK--LGNTKGTDLVLNEVRILCQVNHRSLVRLLGC 394
+G+G +G V G A+K+ + E+R+L + H +++ LL
Sbjct: 37 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 96
Query: 395 -----CVELDQTLMIYEYIPNGTLFDHLHCD-FTGKWPPLPWHLRLVIAHQIAEGLTYLH 448
+E + + ++ L + + C T H++ +I +QI GL Y+H
Sbjct: 97 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDD------HVQFLI-YQILRGLKYIH 149
Query: 449 SAAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDSHIFTTAQGTMGYLDPE 508
SA I HRD+K SN+ ++E K+ DFGL+R T D T T Y PE
Sbjct: 150 SA---DIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTADE--MTGYVATRWYRAPE 199
Query: 509 YYRNFQLTDKS-DVYSFGVVLLELLTSK 535
N+ +++ D++S G ++ ELLT +
Sbjct: 200 IMLNWMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 93/217 (42%), Gaps = 30/217 (13%)
Query: 329 TNNFSKDNLIGTGGFGEVFKGI-LDDGTVTAIKRAKLGNTKGTDL-----VLNEVRILCQ 382
T+ + IG G F V + + L G A AK+ NTK + E RI
Sbjct: 3 TDEYQLYEDIGKGAFSVVRRCVKLCTGHEYA---AKIINTKKLSARDHQKLEREARICRL 59
Query: 383 VNHRSLVRLLGCCVELDQTLMIYEYIPNGTLFDHLHCDFTGKWPPLPWHLRLVIAH---Q 439
+ H ++VRL E ++++ + G LF+ D + ++ +H Q
Sbjct: 60 LKHSNIVRLHDSISEEGFHYLVFDLVTGGELFE----DIVAR----EYYSEADASHCIQQ 111
Query: 440 IAEGLTYLHSAAVPPIYHRDVKSSNILLDEKLNA---KVSDFGLSRLVERTETNDSHIFT 496
I E + + H V HRD+K N+LL K K++DFGL+ V+ D +
Sbjct: 112 ILEAVLHCHQMGV---VHRDLKPENLLLASKCKGAAVKLADFGLAIEVQ----GDQQAWF 164
Query: 497 TAQGTMGYLDPEYYRNFQLTDKSDVYSFGVVLLELLT 533
GT GYL PE R D+++ GV+L LL
Sbjct: 165 GFAGTPGYLSPEVLRKEAYGKPVDIWACGVILYILLV 201
>pdb|2WOT|A Chain A, Alk5 In Complex With 4-((5,6-Dimethyl-2-(2-Pyridyl)-3-
Pyridyl)oxy)-N-(3,4,5-Trimethoxyphenyl)pyridin-2-Amine
pdb|2WOU|A Chain A, Alk5 In Complex With
4-((4-((2,6-Dimethyl-3-Pyridyl)oxy)-2-
Pyridyl)amino)benzenesulfonamide
Length = 306
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 99/215 (46%), Gaps = 35/215 (16%)
Query: 338 IGTGGFGEVFKGILDDGTVTAIKRAKLGNTKGTDLVLNEVRILCQV--NHRSLVRLLGCC 395
IG G FGEV++G V K+ +++ E I V H +++ +
Sbjct: 14 IGKGRFGEVWRGKWRGEEVAV----KIFSSREERSWFREAEIYQTVMLRHENILGFIAAD 69
Query: 396 VE----LDQTLMIYEYIPNGTLFDHLHCDFTGKWPPLPWHLRLVIAHQIAEGLTYLHSAA 451
+ Q ++ +Y +G+LFD+L+ +T + + +A A GL +LH
Sbjct: 70 NKDNGTWTQLWLVSDYHEHGSLFDYLN-RYTVTVEGM-----IKLALSTASGLAHLHMEI 123
Query: 452 V-----PPIYHRDVKSSNILLDEKLNAKVSDFGLS-RLVERTETND---SHIFTTAQGTM 502
V P I HRD+KS NIL+ + ++D GL+ R T+T D +H GT
Sbjct: 124 VGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRV----GTK 179
Query: 503 GYLDPEY------YRNFQLTDKSDVYSFGVVLLEL 531
Y+ PE ++F+ ++D+Y+ G+V E+
Sbjct: 180 RYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEI 214
>pdb|3HKO|A Chain A, Crystal Structure Of A Cdpk Kinase Domain From
Cryptosporidium Parvum, Cgd7_40
Length = 345
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 67/266 (25%), Positives = 105/266 (39%), Gaps = 48/266 (18%)
Query: 312 AAGKSARIFTGKEIRRATNNFSKDNLIGTGGFGEVFKGILDDG-TVTAIK-----RAKLG 365
++G+ F G + + IG G +G V I + + AIK + +
Sbjct: 8 SSGRENLYFQGGSLLELQKKYHLKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQI 67
Query: 366 NTKGTDLVLNEVRILCQVNHRSLVRLLGCCVELDQTLMIYEYIPNGTLFDHLHC---DFT 422
N K + + EVR++ +++H ++ RL + ++ E G L D L+ D T
Sbjct: 68 NPKDVERIKTEVRLMKKLHHPNIARLYEVYEDEQYICLVMELCHGGHLLDKLNVFIDDST 127
Query: 423 GKWP---------PLP---------------------WHLRLV--IAHQIAEGLTYLHSA 450
GK P P +L+ I QI L YLH+
Sbjct: 128 GKCAMDVVKTQICPCPECNEEAINGSIHGFRESLDFVQREKLISNIMRQIFSALHYLHNQ 187
Query: 451 AVPPIYHRDVKSSNILL--DEKLNAKVSDFGLSRLVERTETNDSHIFTTAQGTMGYLDPE 508
I HRD+K N L ++ K+ DFGLS+ + + + TT GT ++ PE
Sbjct: 188 G---ICHRDIKPENFLFSTNKSFEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPE 244
Query: 509 YYR--NFQLTDKSDVYSFGVVLLELL 532
N K D +S GV+L LL
Sbjct: 245 VLNTTNESYGPKCDAWSAGVLLHLLL 270
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 96/208 (46%), Gaps = 27/208 (12%)
Query: 338 IGTGGFGEVFKGI-LDDGTVTAIKRAK--LGNTKGTDLVLNEVRILCQVNHRSLVRLLGC 394
+G+G +G V G A+K+ + E+R+L + H +++ LL
Sbjct: 50 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 109
Query: 395 -----CVELDQTLMIYEYIPNGTLFDHLHCD-FTGKWPPLPWHLRLVIAHQIAEGLTYLH 448
+E + + ++ L + + C T H++ +I +QI GL Y+H
Sbjct: 110 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDD------HVQFLI-YQILRGLKYIH 162
Query: 449 SAAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDSHIFTTAQGTMGYLDPE 508
SA I HRD+K SN+ ++E K+ DFGL+R T+D A T Y PE
Sbjct: 163 SA---DIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMXGXVA--TRWYRAPE 212
Query: 509 YYRNFQLTDKS-DVYSFGVVLLELLTSK 535
N+ +++ D++S G ++ ELLT +
Sbjct: 213 IMLNWMHYNQTVDIWSVGCIMAELLTGR 240
>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1
pdb|3FPQ|B Chain B, Crystal Structure Of The Kinase Domain Of Wnk1
Length = 290
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 89/215 (41%), Gaps = 33/215 (15%)
Query: 335 DNLIGTGGFGEVFKGILDDGTVTAIKRAKLGNTKGT----DLVLNEVRILCQVNHRSLVR 390
D IG G F V+KG LD T + +L + K T E L + H ++VR
Sbjct: 31 DIEIGRGSFKTVYKG-LDTETTVEVAWCELQDRKLTKSERQRFKEEAEXLKGLQHPNIVR 89
Query: 391 LLGC---------CVELDQTLMIYEYIPNGTLFDHLHCDFTGKWPPLPWHLRLVIAHQIA 441
C+ +++ E +GTL +L K L R QI
Sbjct: 90 FYDSWESTVKGKKCI-----VLVTELXTSGTLKTYLKRFKVXKIKVLRSWCR-----QIL 139
Query: 442 EGLTYLHSAAVPPIYHRDVKSSNILLDEKLNA-KVSDFGLSRLVERTETNDSHIFTTAQG 500
+GL +LH+ PPI HRD+K NI + + K+ D GL+ L + G
Sbjct: 140 KGLQFLHTR-TPPIIHRDLKCDNIFITGPTGSVKIGDLGLATL------KRASFAKAVIG 192
Query: 501 TMGYLDPEYYRNFQLTDKSDVYSFGVVLLELLTSK 535
T + PE Y + + DVY+FG LE TS+
Sbjct: 193 TPEFXAPEXYEE-KYDESVDVYAFGXCXLEXATSE 226
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 96/208 (46%), Gaps = 27/208 (12%)
Query: 338 IGTGGFGEVFKGI-LDDGTVTAIKRAK--LGNTKGTDLVLNEVRILCQVNHRSLVRLLGC 394
+G+G +G V G A+K+ + E+R+L + H +++ LL
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 395 -----CVELDQTLMIYEYIPNGTLFDHLHCD-FTGKWPPLPWHLRLVIAHQIAEGLTYLH 448
+E + + ++ L + + C T H++ +I +QI GL Y+H
Sbjct: 90 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDD------HVQFLI-YQILRGLKYIH 142
Query: 449 SAAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDSHIFTTAQGTMGYLDPE 508
SA I HRD+K SN+ ++E K+ D+GL+R T+D T T Y PE
Sbjct: 143 SA---DIIHRDLKPSNLAVNEDCELKILDYGLAR-----HTDDE--MTGYVATRWYRAPE 192
Query: 509 YYRNFQLTDKS-DVYSFGVVLLELLTSK 535
N+ +++ D++S G ++ ELLT +
Sbjct: 193 IMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 54/183 (29%), Positives = 81/183 (44%), Gaps = 26/183 (14%)
Query: 362 AKLGNTKGTDL-----VLNEVRILCQVNHRSLVRLLGCCVELDQTLMIYEYIPNGTLFDH 416
AK+ NTK + E RI + H ++VRL E +I++ + G LF+
Sbjct: 52 AKIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDSISEEGHHYLIFDLVTGGELFE- 110
Query: 417 LHCDFTGKWPPLPWHLRLVIAH---QIAEGLTYLHSAAVPPIYHRDVKSSNILLDEKLNA 473
D + ++ +H QI E + + H V HRD+K N+LL KL
Sbjct: 111 ---DIVAR----EYYSEADASHCIQQILEAVLHCHQMGV---VHRDLKPENLLLASKLKG 160
Query: 474 ---KVSDFGLSRLVERTETNDSHIFTTAQGTMGYLDPEYYRNFQLTDKSDVYSFGVVLLE 530
K++DFGL+ VE + + GT GYL PE R D+++ GV+L
Sbjct: 161 AAVKLADFGLAIEVE----GEQQAWFGFAGTPGYLSPEVLRKDPYGKPVDLWACGVILYI 216
Query: 531 LLT 533
LL
Sbjct: 217 LLV 219
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 54/229 (23%), Positives = 100/229 (43%), Gaps = 40/229 (17%)
Query: 329 TNNFSKDNLIGTGGFGEVFKGILD-DGTVTAIKRAKLGNTKGTDL-VLNEVRILCQVNHR 386
+++F +L+G G +G V G + AIK+ + + L L E++IL H
Sbjct: 10 SSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHE 69
Query: 387 SLVRLLGCC----------VELDQTLM---IYEYIPNGTLFDHLHCDFTGKWPPLPWHLR 433
+++ + V + Q LM ++ I L D H++
Sbjct: 70 NIITIFNIQRPDSFENFNEVYIIQELMQTDLHRVISTQMLSDD--------------HIQ 115
Query: 434 LVIAHQIAEGLTYLHSAAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDSH 493
I +Q + LH + V HRD+K SN+L++ + KV DFGL+R+++ + ++S
Sbjct: 116 YFI-YQTLRAVKVLHGSNV---IHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSE 171
Query: 494 IFTTAQGTMGYLDPEYYR-------NFQLTDKSDVYSFGVVLLELLTSK 535
G + ++ +YR + + + DV+S G +L EL +
Sbjct: 172 PTGQQSGMVEFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRR 220
>pdb|1PY5|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With
Inhibitor
Length = 326
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 99/215 (46%), Gaps = 35/215 (16%)
Query: 338 IGTGGFGEVFKGILDDGTVTAIKRAKLGNTKGTDLVLNEVRILCQV--NHRSLVRLLGCC 395
IG G FGEV++G V K+ +++ E I V H +++ +
Sbjct: 37 IGKGRFGEVWRGKWRGEEVAV----KIFSSREERSWFREAEIYQTVMLRHENILGFIAAD 92
Query: 396 VE----LDQTLMIYEYIPNGTLFDHLHCDFTGKWPPLPWHLRLVIAHQIAEGLTYLHSAA 451
+ Q ++ +Y +G+LFD+L+ +T + + +A A GL +LH
Sbjct: 93 NKDNGTWTQLWLVSDYHEHGSLFDYLN-RYTVTVEGM-----IKLALSTASGLAHLHMEI 146
Query: 452 V-----PPIYHRDVKSSNILLDEKLNAKVSDFGLS-RLVERTETND---SHIFTTAQGTM 502
V P I HRD+KS NIL+ + ++D GL+ R T+T D +H GT
Sbjct: 147 VGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRV----GTK 202
Query: 503 GYLDPEY------YRNFQLTDKSDVYSFGVVLLEL 531
Y+ PE ++F+ ++D+Y+ G+V E+
Sbjct: 203 RYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEI 237
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 57/219 (26%), Positives = 97/219 (44%), Gaps = 49/219 (22%)
Query: 338 IGTGGFGEVFKGILDDGTVTAIKRAKLGNTKGTDL----VLNEVRILCQVNHRSLVRLLG 393
+G+G +G V + D T + KL ++L E+R+L + H +++ LL
Sbjct: 33 VGSGAYGAVCSAV-DGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLD 91
Query: 394 CCVELDQTLMIYEYIPNGTLFDHLHCDFTGKWPPLPW----------HLRL------VIA 437
+ P+ TL DFT + +P+ H +L +
Sbjct: 92 V------------FTPDETL-----DDFTDFYLVMPFMGTDLGKLMKHEKLGEDRIQFLV 134
Query: 438 HQIAEGLTYLHSAAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDSHIFTT 497
+Q+ +GL Y+H+A I HRD+K N+ ++E K+ DFGL+R DS +
Sbjct: 135 YQMLKGLRYIHAAG---IIHRDLKPGNLAVNEDCELKILDFGLAR------QADSEMXGX 185
Query: 498 AQGTMGYLDPEYYRNF-QLTDKSDVYSFGVVLLELLTSK 535
T Y PE N+ + T D++S G ++ E++T K
Sbjct: 186 VV-TRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGK 223
>pdb|1B6C|B Chain B, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|D Chain D, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|F Chain F, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|H Chain H, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1IAS|A Chain A, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|B Chain B, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|C Chain C, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|D Chain D, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|E Chain E, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|3FAA|A Chain A, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|B Chain B, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|C Chain C, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|D Chain D, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|E Chain E, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3KCF|A Chain A, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|B Chain B, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|C Chain C, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|D Chain D, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|E Chain E, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|2X7O|A Chain A, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|B Chain B, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|C Chain C, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|D Chain D, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|E Chain E, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
Length = 342
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 99/215 (46%), Gaps = 35/215 (16%)
Query: 338 IGTGGFGEVFKGILDDGTVTAIKRAKLGNTKGTDLVLNEVRILCQV--NHRSLVRLLGCC 395
IG G FGEV++G V K+ +++ E I V H +++ +
Sbjct: 50 IGKGRFGEVWRGKWRGEEVAV----KIFSSREERSWFREAEIYQTVMLRHENILGFIAAD 105
Query: 396 VE----LDQTLMIYEYIPNGTLFDHLHCDFTGKWPPLPWHLRLVIAHQIAEGLTYLHSAA 451
+ Q ++ +Y +G+LFD+L+ +T + + +A A GL +LH
Sbjct: 106 NKDNGTWTQLWLVSDYHEHGSLFDYLN-RYTVTVEGM-----IKLALSTASGLAHLHMEI 159
Query: 452 V-----PPIYHRDVKSSNILLDEKLNAKVSDFGLS-RLVERTETND---SHIFTTAQGTM 502
V P I HRD+KS NIL+ + ++D GL+ R T+T D +H GT
Sbjct: 160 VGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRV----GTK 215
Query: 503 GYLDPEY------YRNFQLTDKSDVYSFGVVLLEL 531
Y+ PE ++F+ ++D+Y+ G+V E+
Sbjct: 216 RYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEI 250
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 95/208 (45%), Gaps = 27/208 (12%)
Query: 338 IGTGGFGEVFKGI-LDDGTVTAIKRAK--LGNTKGTDLVLNEVRILCQVNHRSLVRLLGC 394
+G+G +G V G A+K+ + E+R+L + H +++ LL
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 395 -----CVELDQTLMIYEYIPNGTLFDHLHCD-FTGKWPPLPWHLRLVIAHQIAEGLTYLH 448
+E + + ++ L + + C T H++ +I +QI GL Y+H
Sbjct: 90 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDD------HVQFLI-YQILRGLKYIH 142
Query: 449 SAAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDSHIFTTAQGTMGYLDPE 508
SA I HRD+K SN+ ++E K+ DFGL+R T+D T T Y PE
Sbjct: 143 SA---DIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDE--MTGYVATRWYRAPE 192
Query: 509 YYRNFQLTDKS-DVYSFGVVLLELLTSK 535
N +++ D++S G ++ ELLT +
Sbjct: 193 IMLNAMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 86/207 (41%), Gaps = 16/207 (7%)
Query: 337 LIGTGGFGEVFK-GILDDGTVTA---IKRAKLGNTKGTDLVLNEVRILCQVNHRSLVRLL 392
+G GGF + F+ D V A + ++ L + + E+ I + H+ +V
Sbjct: 48 FLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFH 107
Query: 393 GCCVELDQTLMIYEYIPNGTLFDHLHCDFTGKWPPLPWHLRLVIAHQIAEGLTYLHSAAV 452
G + D ++ E +L + P ++LR QI G YLH V
Sbjct: 108 GFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLR-----QIVLGCQYLHRNRV 162
Query: 453 PPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDSHIFTTAQGTMGYLDPEYYRN 512
HRD+K N+ L+E L K+ DFGL+ VE D GT Y+ PE
Sbjct: 163 ---IHRDLKLGNLFLNEDLEVKIGDFGLATKVE----YDGERKKVLCGTPNYIAPEVLSK 215
Query: 513 FQLTDKSDVYSFGVVLLELLTSKKAID 539
+ + DV+S G ++ LL K +
Sbjct: 216 KGHSFEVDVWSIGCIMYTLLVGKPPFE 242
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 96/208 (46%), Gaps = 27/208 (12%)
Query: 338 IGTGGFGEVFKGI-LDDGTVTAIKRAK--LGNTKGTDLVLNEVRILCQVNHRSLVRLLGC 394
+G+G +G V G A+K+ + E+R+L + H +++ LL
Sbjct: 53 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 112
Query: 395 -----CVELDQTLMIYEYIPNGTLFDHLHCD-FTGKWPPLPWHLRLVIAHQIAEGLTYLH 448
+E + + ++ L + + C T H++ +I +QI GL Y+H
Sbjct: 113 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDD------HVQFLI-YQILRGLKYIH 165
Query: 449 SAAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDSHIFTTAQGTMGYLDPE 508
SA I HRD+K SN+ ++E K+ DFGL+R T+D A T Y PE
Sbjct: 166 SA---DIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMXGYVA--TRWYRAPE 215
Query: 509 YYRNFQLTDKS-DVYSFGVVLLELLTSK 535
N+ +++ D++S G ++ ELLT +
Sbjct: 216 IMLNWMHYNQTVDIWSVGCIMAELLTGR 243
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 96/208 (46%), Gaps = 27/208 (12%)
Query: 338 IGTGGFGEVFKGI-LDDGTVTAIKRAK--LGNTKGTDLVLNEVRILCQVNHRSLVRLLGC 394
+G+G +G V G A+K+ + E+R+L + H +++ LL
Sbjct: 30 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 395 -----CVELDQTLMIYEYIPNGTLFDHLHCD-FTGKWPPLPWHLRLVIAHQIAEGLTYLH 448
+E + + ++ L + + C T H++ +I +QI GL Y+H
Sbjct: 90 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDD------HVQFLI-YQILRGLKYIH 142
Query: 449 SAAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDSHIFTTAQGTMGYLDPE 508
SA I HRD+K SN+ ++E K+ DFGL+R T+D A T Y PE
Sbjct: 143 SA---DIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMAGFVA--TRWYRAPE 192
Query: 509 YYRNFQLTDKS-DVYSFGVVLLELLTSK 535
N+ +++ D++S G ++ ELLT +
Sbjct: 193 IMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 86/207 (41%), Gaps = 16/207 (7%)
Query: 337 LIGTGGFGEVFK-GILDDGTVTA---IKRAKLGNTKGTDLVLNEVRILCQVNHRSLVRLL 392
+G GGF + F+ D V A + ++ L + + E+ I + H+ +V
Sbjct: 46 FLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFH 105
Query: 393 GCCVELDQTLMIYEYIPNGTLFDHLHCDFTGKWPPLPWHLRLVIAHQIAEGLTYLHSAAV 452
G + D ++ E +L + P ++LR QI G YLH V
Sbjct: 106 GFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLR-----QIVLGCQYLHRNRV 160
Query: 453 PPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDSHIFTTAQGTMGYLDPEYYRN 512
HRD+K N+ L+E L K+ DFGL+ VE D GT Y+ PE
Sbjct: 161 ---IHRDLKLGNLFLNEDLEVKIGDFGLATKVE----YDGERKKVLCGTPNYIAPEVLSK 213
Query: 513 FQLTDKSDVYSFGVVLLELLTSKKAID 539
+ + DV+S G ++ LL K +
Sbjct: 214 KGHSFEVDVWSIGCIMYTLLVGKPPFE 240
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 96/208 (46%), Gaps = 27/208 (12%)
Query: 338 IGTGGFGEVFKGI-LDDGTVTAIKRAK--LGNTKGTDLVLNEVRILCQVNHRSLVRLLGC 394
+G+G +G V G A+K+ + E+R+L + H +++ LL
Sbjct: 30 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 395 -----CVELDQTLMIYEYIPNGTLFDHLHCD-FTGKWPPLPWHLRLVIAHQIAEGLTYLH 448
+E + + ++ L + + C T H++ +I +QI GL Y+H
Sbjct: 90 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDD------HVQFLI-YQILRGLKYIH 142
Query: 449 SAAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDSHIFTTAQGTMGYLDPE 508
SA I HRD+K SN+ ++E K+ DFGL+R T+D A T Y PE
Sbjct: 143 SA---DIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMAGFVA--TRWYRAPE 192
Query: 509 YYRNFQLTDKS-DVYSFGVVLLELLTSK 535
N+ +++ D++S G ++ ELLT +
Sbjct: 193 IMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 43/166 (25%), Positives = 78/166 (46%), Gaps = 13/166 (7%)
Query: 373 VLNEVRILCQVNHRSLVRLLGCCVELDQTLMIYEYIPNGTLFDHLHCDFTGKWPPLPWHL 432
++ E+++L + N +V G + + E++ G+L L + +P +
Sbjct: 61 IIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLK-----EAKRIPEEI 115
Query: 433 RLVIAHQIAEGLTYLHSAAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDS 492
++ + GL YL I HRDVK SNIL++ + K+ DFG+S + + N
Sbjct: 116 LGKVSIAVLRGLAYLREKH--QIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMAN-- 171
Query: 493 HIFTTAQGTMGYLDPEYYRNFQLTDKSDVYSFGVVLLELLTSKKAI 538
+ GT Y+ PE + + +SD++S G+ L+EL + I
Sbjct: 172 ----SFVGTRSYMAPERLQGTHYSVQSDIWSMGLSLVELAVGRYPI 213
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 89/216 (41%), Gaps = 24/216 (11%)
Query: 327 RATNNFSKDNLIGTGGFGEV---FKGILDDGTVTAIKRAKLGNTKGTDLVLNEVRILCQV 383
R T + +G G F V K + I K + + + E RI +
Sbjct: 8 RFTEEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICRLL 67
Query: 384 NHRSLVRLLGCCVELDQTLMIYEYIPNGTLFDHLHCDFTGKWPPLPWHLRLVIAH---QI 440
H ++VRL E +I++ + G LF+ D + ++ +H QI
Sbjct: 68 KHPNIVRLHDSISEEGHHYLIFDLVTGGELFE----DIVAR----EYYSEADASHCIQQI 119
Query: 441 AEGLTYLHSAAVPPIYHRDVKSSNILLDEKLNA---KVSDFGLSRLVERTETNDSHIFTT 497
E + + H V HR++K N+LL KL K++DFGL+ VE + +
Sbjct: 120 LEAVLHCHQMGV---VHRNLKPENLLLASKLKGAAVKLADFGLAIEVE----GEQQAWFG 172
Query: 498 AQGTMGYLDPEYYRNFQLTDKSDVYSFGVVLLELLT 533
GT GYL PE R D+++ GV+L LL
Sbjct: 173 FAGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLV 208
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 92/207 (44%), Gaps = 19/207 (9%)
Query: 360 KRAKLGNTKGT--DLVLNEVRILCQVNHRSLVRLLGCCVELDQTLMIYEYIPNGTLFDHL 417
KR + +G + + EV IL QV H +++ L ++I E + G LFD
Sbjct: 47 KRQSRASRRGVSREEIEREVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFD-- 104
Query: 418 HCDFTGKWPPLPWHLRLVIAHQIAEGLTYLHSAAVPPIYHRDVKSSNI-LLDEKL---NA 473
F + L QI +G+ YLH+ + H D+K NI LLD+ + +
Sbjct: 105 ---FLAQKESLSEEEATSFIKQILDGVNYLHTKKIA---HFDLKPENIMLLDKNIPIPHI 158
Query: 474 KVSDFGLSRLVERTETNDSHIFTTAQGTMGYLDPEYYRNFQLTDKSDVYSFGVVLLELLT 533
K+ DFGL+ +E D F GT ++ PE L ++D++S GV+ LL+
Sbjct: 159 KLIDFGLAHEIE-----DGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLS 213
Query: 534 SKKAIDFNREEENVNLVVYMKKIMDEE 560
+ ++E + + + DEE
Sbjct: 214 GASPFLGDTKQETLANITSVSYDFDEE 240
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 96/208 (46%), Gaps = 27/208 (12%)
Query: 338 IGTGGFGEVFKGI-LDDGTVTAIKRAK--LGNTKGTDLVLNEVRILCQVNHRSLVRLLGC 394
+G+G +G V G A+K+ + E+R+L + H +++ LL
Sbjct: 26 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 85
Query: 395 -----CVELDQTLMIYEYIPNGTLFDHLHCD-FTGKWPPLPWHLRLVIAHQIAEGLTYLH 448
+E + + ++ L + + C T H++ +I +QI GL Y+H
Sbjct: 86 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDD------HVQFLI-YQILRGLKYIH 138
Query: 449 SAAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDSHIFTTAQGTMGYLDPE 508
SA I HRD+K SN+ ++E K+ DFGL+R T+D A T Y PE
Sbjct: 139 SA---DIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMAGFVA--TRWYRAPE 188
Query: 509 YYRNFQLTDKS-DVYSFGVVLLELLTSK 535
N+ +++ D++S G ++ ELLT +
Sbjct: 189 IMLNWMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 50/216 (23%), Positives = 87/216 (40%), Gaps = 22/216 (10%)
Query: 330 NNFSKDNLIGTGGFGEVFKGI-LDDGTVTAIK---RAKLGNTKGTDLVLNEVRILCQVNH 385
++F +G G FG V+ + + A+K +++L + E+ I + H
Sbjct: 14 DDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRH 73
Query: 386 RSLVRLLGCCVELDQTLMIYEYIPNGTLFDHL--HCDFTGKWPPLPWHLRLVIAHQIAEG 443
+++R+ + + ++ E+ P G L+ L H F + ++A+
Sbjct: 74 PNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQ-------RSATFMEELADA 126
Query: 444 LTYLHSAAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDSHIFTTAQGTMG 503
L Y H V HRD+K N+L+ K K++DFG S GT+
Sbjct: 127 LHYCHERKV---IHRDIKPENLLMGYKGELKIADFGWSVHAPSLRRR------XMCGTLD 177
Query: 504 YLDPEYYRNFQLTDKSDVYSFGVVLLELLTSKKAID 539
YL PE +K D++ GV+ E L D
Sbjct: 178 YLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFD 213
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 50/216 (23%), Positives = 87/216 (40%), Gaps = 22/216 (10%)
Query: 330 NNFSKDNLIGTGGFGEVFKGI-LDDGTVTAIK---RAKLGNTKGTDLVLNEVRILCQVNH 385
++F +G G FG V+ + + A+K +++L + E+ I + H
Sbjct: 15 DDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRH 74
Query: 386 RSLVRLLGCCVELDQTLMIYEYIPNGTLFDHL--HCDFTGKWPPLPWHLRLVIAHQIAEG 443
+++R+ + + ++ E+ P G L+ L H F + ++A+
Sbjct: 75 PNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQ-------RSATFMEELADA 127
Query: 444 LTYLHSAAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDSHIFTTAQGTMG 503
L Y H V HRD+K N+L+ K K++DFG S GT+
Sbjct: 128 LHYCHERKV---IHRDIKPENLLMGYKGELKIADFGWSVHAPSLRRR------XMCGTLD 178
Query: 504 YLDPEYYRNFQLTDKSDVYSFGVVLLELLTSKKAID 539
YL PE +K D++ GV+ E L D
Sbjct: 179 YLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFD 214
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 44/209 (21%), Positives = 88/209 (42%), Gaps = 16/209 (7%)
Query: 330 NNFSKDNLIGTGGFGEVFKG----ILDDGTVTAIKRAKLGNTKGTDLVLNEVRILCQVNH 385
+F ++G G F V + + +++ + V E ++ +++H
Sbjct: 37 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 96
Query: 386 RSLVRLLGCCVELDQTLMIYEYIPNGTLFDHLHCDFTGKWPPLPWHLRLVIAHQIAEGLT 445
V+L C + ++ Y NG L ++ K +I L
Sbjct: 97 PFFVKLYFCFQDDEKLYFGLSYAKNGELLKYIR-----KIGSFDETCTRFYTAEIVSALE 151
Query: 446 YLHSAAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVE-RTETNDSHIFTTAQGTMGY 504
YLH I HRD+K NILL+E ++ +++DFG ++++ ++ ++ F GT Y
Sbjct: 152 YLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFV---GTAQY 205
Query: 505 LDPEYYRNFQLTDKSDVYSFGVVLLELLT 533
+ PE SD+++ G ++ +L+
Sbjct: 206 VSPELLTEKSACKSSDLWALGCIIYQLVA 234
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 85/203 (41%), Gaps = 16/203 (7%)
Query: 337 LIGTGGFGEVFK-GILDDGTVTA---IKRAKLGNTKGTDLVLNEVRILCQVNHRSLVRLL 392
+G GGF + F+ D V A + ++ L + + E+ I + H+ +V
Sbjct: 22 FLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFH 81
Query: 393 GCCVELDQTLMIYEYIPNGTLFDHLHCDFTGKWPPLPWHLRLVIAHQIAEGLTYLHSAAV 452
G + D ++ E +L + P ++LR QI G YLH V
Sbjct: 82 GFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLR-----QIVLGCQYLHRNRV 136
Query: 453 PPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDSHIFTTAQGTMGYLDPEYYRN 512
HRD+K N+ L+E L K+ DFGL+ VE D GT Y+ PE
Sbjct: 137 ---IHRDLKLGNLFLNEDLEVKIGDFGLATKVE----YDGERKKVLCGTPNYIAPEVLSK 189
Query: 513 FQLTDKSDVYSFGVVLLELLTSK 535
+ + DV+S G ++ LL K
Sbjct: 190 KGHSFEVDVWSIGCIMYTLLVGK 212
>pdb|2IN6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd311839
pdb|2IO6|A Chain A, Wee1 Kinase Complexed With Inhibitor Pd330961
Length = 287
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 48/147 (32%), Positives = 70/147 (47%), Gaps = 12/147 (8%)
Query: 327 RATNNFSKDNLIGTGGFGEVFKGILD-DGTVTAIKRAK--LGNTKGTDLVLNEV---RIL 380
R T F + IG+G FG VFK + DG + AIKR+K L + L EV +L
Sbjct: 6 RYTTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVL 65
Query: 381 CQVNHRSLVRLLGCCVELDQTLMIYEYIPNGTLFDHLHCDFTGKWPPLPWHLRLVIAHQI 440
Q H +VR E D L+ EY G+L D + ++ L+ ++ Q+
Sbjct: 66 GQ--HSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLL-QV 122
Query: 441 AEGLTYLHSAAVPPIYHRDVKSSNILL 467
GL Y+HS + + H D+K SNI +
Sbjct: 123 GRGLRYIHSMS---LVHMDIKPSNIFI 146
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 91/210 (43%), Gaps = 23/210 (10%)
Query: 329 TNNFSKDNLIGTGGFGEVFKGILDDGTVTAIKRAKLGNTKGTDLVLNEVRILCQVNHRSL 388
++ F ++ +G G V++ GT L T +V E+ +L +++H ++
Sbjct: 52 SDFFEVESELGRGATSIVYR-CKQKGTQKPYALKVLKKTVDKKIVRTEIGVLLRLSHPNI 110
Query: 389 VRLLGCCVELDQTLMIYEYIPNGTLFDHL-HCDFTGKWPPLPWHLRLVIAHQIAEGLTYL 447
++L + ++ E + G LFD + + + QI E + YL
Sbjct: 111 IKLKEIFETPTEISLVLELVTGGELFDRIVEKGYYSERDAAD------AVKQILEAVAYL 164
Query: 448 HSAAVPPIYHRDVKSSNILL-----DEKLNAKVSDFGLSRLVERTETNDSHIFTTAQGTM 502
H I HRD+K N+L D L K++DFGLS++VE + T GT
Sbjct: 165 HENG---IVHRDLKPENLLYATPAPDAPL--KIADFGLSKIVEH-----QVLMKTVCGTP 214
Query: 503 GYLDPEYYRNFQLTDKSDVYSFGVVLLELL 532
GY PE R + D++S G++ LL
Sbjct: 215 GYCAPEILRGCAYGPEVDMWSVGIITYILL 244
>pdb|3BI6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd352396
pdb|3BIZ|A Chain A, Wee1 Kinase Complex With Inhibitor Pd331618
pdb|3CQE|A Chain A, Wee1 Kinase Complex With Inhibitor Pd074291
pdb|3CR0|A Chain A, Wee1 Kinase Complex With Inhibitor Pd259_809
Length = 287
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 48/147 (32%), Positives = 70/147 (47%), Gaps = 12/147 (8%)
Query: 327 RATNNFSKDNLIGTGGFGEVFKGILD-DGTVTAIKRAK--LGNTKGTDLVLNEV---RIL 380
R T F + IG+G FG VFK + DG + AIKR+K L + L EV +L
Sbjct: 6 RYTTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVL 65
Query: 381 CQVNHRSLVRLLGCCVELDQTLMIYEYIPNGTLFDHLHCDFTGKWPPLPWHLRLVIAHQI 440
Q H +VR E D L+ EY G+L D + ++ L+ ++ Q+
Sbjct: 66 GQ--HSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLL-QV 122
Query: 441 AEGLTYLHSAAVPPIYHRDVKSSNILL 467
GL Y+HS + + H D+K SNI +
Sbjct: 123 GRGLRYIHSMS---LVHMDIKPSNIFI 146
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 92/207 (44%), Gaps = 19/207 (9%)
Query: 360 KRAKLGNTKGT--DLVLNEVRILCQVNHRSLVRLLGCCVELDQTLMIYEYIPNGTLFDHL 417
KR + +G + + EV IL QV H +++ L ++I E + G LFD
Sbjct: 47 KRQSRASRRGVSREEIEREVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFD-- 104
Query: 418 HCDFTGKWPPLPWHLRLVIAHQIAEGLTYLHSAAVPPIYHRDVKSSNI-LLDEKL---NA 473
F + L QI +G+ YLH+ + H D+K NI LLD+ + +
Sbjct: 105 ---FLAQKESLSEEEATSFIKQILDGVNYLHTKKIA---HFDLKPENIMLLDKNIPIPHI 158
Query: 474 KVSDFGLSRLVERTETNDSHIFTTAQGTMGYLDPEYYRNFQLTDKSDVYSFGVVLLELLT 533
K+ DFGL+ +E D F GT ++ PE L ++D++S GV+ LL+
Sbjct: 159 KLIDFGLAHEIE-----DGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLS 213
Query: 534 SKKAIDFNREEENVNLVVYMKKIMDEE 560
+ ++E + + + DEE
Sbjct: 214 GASPFLGDTKQETLANITSVSYDFDEE 240
>pdb|1X8B|A Chain A, Structure Of Human Wee1a Kinase: Kinase Domain Complexed
With Inhibitor Pd0407824
Length = 289
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 48/147 (32%), Positives = 70/147 (47%), Gaps = 12/147 (8%)
Query: 327 RATNNFSKDNLIGTGGFGEVFKGILD-DGTVTAIKRAK--LGNTKGTDLVLNEV---RIL 380
R T F + IG+G FG VFK + DG + AIKR+K L + L EV +L
Sbjct: 8 RYTTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVL 67
Query: 381 CQVNHRSLVRLLGCCVELDQTLMIYEYIPNGTLFDHLHCDFTGKWPPLPWHLRLVIAHQI 440
Q H +VR E D L+ EY G+L D + ++ L+ ++ Q+
Sbjct: 68 GQ--HSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLL-QV 124
Query: 441 AEGLTYLHSAAVPPIYHRDVKSSNILL 467
GL Y+HS + + H D+K SNI +
Sbjct: 125 GRGLRYIHSMS---LVHMDIKPSNIFI 148
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 95/213 (44%), Gaps = 34/213 (15%)
Query: 337 LIGTGGFGEVFKGILDDGTVTAIKRAKLGNTKGTDLVLNEVRILCQVNHRSLVRLLGCCV 396
+IG G FG VF+ L + AIK+ L + + + E++I+ V H ++V L
Sbjct: 47 VIGNGSFGVVFQAKLVESDEVAIKKV-LQDKRFKN---RELQIMRIVKHPNVVDLKAFFY 102
Query: 397 ----ELDQTL--MIYEYIPNGTLFDHLHCDFTGKWPPLPWHLRLVIAHQIAEGLTYLHSA 450
+ D+ ++ EY+P H + +P L + +Q+ L Y+HS
Sbjct: 103 SNGDKKDEVFLNLVLEYVPETVYRASRH--YAKLKQTMPMLLIKLYMYQLLRSLAYIHSI 160
Query: 451 AVPPIYHRDVKSSNILLDEKLNA-KVSDFGLSRLVERTETNDSHIFTTAQGTMGYLDPEY 509
I HRD+K N+LLD K+ DFG ++++ E N S I + Y
Sbjct: 161 G---ICHRDIKPQNLLLDPPSGVLKLIDFGSAKILIAGEPNVSXICS-----------RY 206
Query: 510 YRNFQL-------TDKSDVYSFGVVLLELLTSK 535
YR +L T D++S G V+ EL+ +
Sbjct: 207 YRAPELIFGATNYTTNIDIWSTGCVMAELMQGQ 239
>pdb|2Z2W|A Chain A, Humand Wee1 Kinase Complexed With Inhibitor Pf0335770
Length = 285
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 48/147 (32%), Positives = 70/147 (47%), Gaps = 12/147 (8%)
Query: 327 RATNNFSKDNLIGTGGFGEVFKGILD-DGTVTAIKRAK--LGNTKGTDLVLNEV---RIL 380
R T F + IG+G FG VFK + DG + AIKR+K L + L EV +L
Sbjct: 4 RYTTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVL 63
Query: 381 CQVNHRSLVRLLGCCVELDQTLMIYEYIPNGTLFDHLHCDFTGKWPPLPWHLRLVIAHQI 440
Q H +VR E D L+ EY G+L D + ++ L+ ++ Q+
Sbjct: 64 GQ--HSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLL-QV 120
Query: 441 AEGLTYLHSAAVPPIYHRDVKSSNILL 467
GL Y+HS + + H D+K SNI +
Sbjct: 121 GRGLRYIHSMS---LVHMDIKPSNIFI 144
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 92/207 (44%), Gaps = 19/207 (9%)
Query: 360 KRAKLGNTKGT--DLVLNEVRILCQVNHRSLVRLLGCCVELDQTLMIYEYIPNGTLFDHL 417
KR + +G + + EV IL QV H +++ L ++I E + G LFD
Sbjct: 47 KRQSRASRRGVSREEIEREVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFD-- 104
Query: 418 HCDFTGKWPPLPWHLRLVIAHQIAEGLTYLHSAAVPPIYHRDVKSSNI-LLDEKL---NA 473
F + L QI +G+ YLH+ I H D+K NI LLD+ + +
Sbjct: 105 ---FLAQKESLSEEEATSFIKQILDGVNYLHT---KKIAHFDLKPENIMLLDKNIPIPHI 158
Query: 474 KVSDFGLSRLVERTETNDSHIFTTAQGTMGYLDPEYYRNFQLTDKSDVYSFGVVLLELLT 533
K+ DFGL+ +E D F GT ++ PE L ++D++S GV+ LL+
Sbjct: 159 KLIDFGLAHEIE-----DGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLS 213
Query: 534 SKKAIDFNREEENVNLVVYMKKIMDEE 560
+ ++E + + + DEE
Sbjct: 214 GASPFLGDTKQETLANITAVSYDFDEE 240
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 39/106 (36%), Positives = 59/106 (55%), Gaps = 12/106 (11%)
Query: 431 HLRLVIAHQIAEGLTYLHSAAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVERTETN 490
H++ +I +QI GL Y+HSA I HRD+K SN+ ++E K+ DFGL R T+
Sbjct: 126 HVQFLI-YQILRGLKYIHSA---DIIHRDLKPSNLAVNEDSELKILDFGLCR-----HTD 176
Query: 491 DSHIFTTAQGTMGYLDPEYYRNFQLTDKS-DVYSFGVVLLELLTSK 535
D T T Y PE N+ +++ D++S G ++ ELLT +
Sbjct: 177 DE--MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 92/207 (44%), Gaps = 19/207 (9%)
Query: 360 KRAKLGNTKGT--DLVLNEVRILCQVNHRSLVRLLGCCVELDQTLMIYEYIPNGTLFDHL 417
KR + +G + + EV IL QV H +++ L ++I E + G LFD
Sbjct: 47 KRQSRASRRGVSREEIEREVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFD-- 104
Query: 418 HCDFTGKWPPLPWHLRLVIAHQIAEGLTYLHSAAVPPIYHRDVKSSNI-LLDEKL---NA 473
F + L QI +G+ YLH+ + H D+K NI LLD+ + +
Sbjct: 105 ---FLAQKESLSEEEATSFIKQILDGVNYLHTKKIA---HFDLKPENIMLLDKNIPIPHI 158
Query: 474 KVSDFGLSRLVERTETNDSHIFTTAQGTMGYLDPEYYRNFQLTDKSDVYSFGVVLLELLT 533
K+ DFGL+ +E D F GT ++ PE L ++D++S GV+ LL+
Sbjct: 159 KLIDFGLAHEIE-----DGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLS 213
Query: 534 SKKAIDFNREEENVNLVVYMKKIMDEE 560
+ ++E + + + DEE
Sbjct: 214 GASPFLGDTKQETLANITSVSYDFDEE 240
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 92/207 (44%), Gaps = 19/207 (9%)
Query: 360 KRAKLGNTKGT--DLVLNEVRILCQVNHRSLVRLLGCCVELDQTLMIYEYIPNGTLFDHL 417
KR + +G + + EV IL QV H +++ L ++I E + G LFD
Sbjct: 47 KRQSRASRRGVSREEIEREVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFD-- 104
Query: 418 HCDFTGKWPPLPWHLRLVIAHQIAEGLTYLHSAAVPPIYHRDVKSSNI-LLDEKL---NA 473
F + L QI +G+ YLH+ + H D+K NI LLD+ + +
Sbjct: 105 ---FLAQKESLSEEEATSFIKQILDGVNYLHTKKIA---HFDLKPENIMLLDKNIPIPHI 158
Query: 474 KVSDFGLSRLVERTETNDSHIFTTAQGTMGYLDPEYYRNFQLTDKSDVYSFGVVLLELLT 533
K+ DFGL+ +E D F GT ++ PE L ++D++S GV+ LL+
Sbjct: 159 KLIDFGLAHEIE-----DGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLS 213
Query: 534 SKKAIDFNREEENVNLVVYMKKIMDEE 560
+ ++E + + + DEE
Sbjct: 214 GASPFLGDTKQETLANITAVSYDFDEE 240
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 50/216 (23%), Positives = 87/216 (40%), Gaps = 22/216 (10%)
Query: 330 NNFSKDNLIGTGGFGEVFKGI-LDDGTVTAIK---RAKLGNTKGTDLVLNEVRILCQVNH 385
++F +G G FG V+ + + A+K +++L + E+ I + H
Sbjct: 14 DDFDIVRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRH 73
Query: 386 RSLVRLLGCCVELDQTLMIYEYIPNGTLFDHL--HCDFTGKWPPLPWHLRLVIAHQIAEG 443
+++R+ + + ++ E+ P G L+ L H F + ++A+
Sbjct: 74 PNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQ-------RSATFMEELADA 126
Query: 444 LTYLHSAAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDSHIFTTAQGTMG 503
L Y H V HRD+K N+L+ K K++DFG S GT+
Sbjct: 127 LHYCHERKV---IHRDIKPENLLMGYKGELKIADFGWSVHAPSLRRR------XMCGTLD 177
Query: 504 YLDPEYYRNFQLTDKSDVYSFGVVLLELLTSKKAID 539
YL PE +K D++ GV+ E L D
Sbjct: 178 YLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFD 213
>pdb|3MTF|A Chain A, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3MTF|B Chain B, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3OOM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00507
pdb|3Q4U|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|B Chain B, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|C Chain C, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|D Chain D, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
Length = 301
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 94/212 (44%), Gaps = 29/212 (13%)
Query: 338 IGTGGFGEVFKGILDDGTVTAIKRAKLGNTKGTDLVLNEVRILCQV--NHRSLVRLLGCC 395
+G G +GEV++G V K+ +++ E + V H +++ +
Sbjct: 16 VGKGRYGEVWRGSWQGENVAV----KIFSSRDEKSWFRETELYNTVMLRHENILGFIASD 71
Query: 396 V----ELDQTLMIYEYIPNGTLFDHLHCDFTGKWPPLPWHLRLVIAHQIAEGLTYLH--- 448
+ Q +I Y G+L+D+L L R+V++ IA GL +LH
Sbjct: 72 MTSRHSSTQLWLITHYHEMGSLYDYLQLTTLDTVSCL----RIVLS--IASGLAHLHIEI 125
Query: 449 --SAAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDSHIFTTAQ-GTMGYL 505
+ P I HRD+KS NIL+ + ++D GL+ ++ TN + + GT Y+
Sbjct: 126 FGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLA-VMHSQSTNQLDVGNNPRVGTKRYM 184
Query: 506 DPEYYRN------FQLTDKSDVYSFGVVLLEL 531
PE F + D+++FG+VL E+
Sbjct: 185 APEVLDETIQVDCFDSYKRVDIWAFGLVLWEV 216
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/208 (24%), Positives = 85/208 (40%), Gaps = 27/208 (12%)
Query: 338 IGTGGFGEV---FKGILDDGTVTAIKRAKLGNTKGTDLVLNEVRILCQVNHRSLVRLLGC 394
IG+G G V + +LD N E+ ++ VNH++++ LL
Sbjct: 32 IGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKXVNHKNIISLLNV 91
Query: 395 CV------ELDQTLMIYEYIPNGTLFDHLHCDFTGKWPPLPWHLRL-VIAHQIAEGLTYL 447
E ++ E + + L + + H R+ + +Q+ G+ +L
Sbjct: 92 FTPQKTLEEFQDVYLVMELM-DANLXQVIQMELD--------HERMSYLLYQMLXGIKHL 142
Query: 448 HSAAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDSHIFTTAQGTMGYLDP 507
HSA I HRD+K SNI++ K+ DFGL+R S + T T Y P
Sbjct: 143 HSAG---IIHRDLKPSNIVVKSDXTLKILDFGLAR-----TAGTSFMMTPYVVTRYYRAP 194
Query: 508 EYYRNFQLTDKSDVYSFGVVLLELLTSK 535
E + D++S G ++ E++ K
Sbjct: 195 EVILGMGYKENVDIWSVGCIMGEMVRHK 222
>pdb|4DYM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00135
Length = 301
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 94/212 (44%), Gaps = 29/212 (13%)
Query: 338 IGTGGFGEVFKGILDDGTVTAIKRAKLGNTKGTDLVLNEVRILCQV--NHRSLVRLLGCC 395
+G G +GEV++G V K+ +++ E + V H +++ +
Sbjct: 16 VGKGRYGEVWRGSWQGENVAV----KIFSSRDEKSWFRETELYNTVMLRHENILGFIASD 71
Query: 396 V----ELDQTLMIYEYIPNGTLFDHLHCDFTGKWPPLPWHLRLVIAHQIAEGLTYLH--- 448
+ Q +I Y G+L+D+L L R+V++ IA GL +LH
Sbjct: 72 MTSRHSSTQLWLITHYHEMGSLYDYLQLTTLDTVSCL----RIVLS--IASGLAHLHIEI 125
Query: 449 --SAAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDSHIFTTAQ-GTMGYL 505
+ P I HRD+KS NIL+ + ++D GL+ ++ TN + + GT Y+
Sbjct: 126 FGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLA-VMHSQSTNQLDVGNNPRVGTKRYM 184
Query: 506 DPEYYRN------FQLTDKSDVYSFGVVLLEL 531
PE F + D+++FG+VL E+
Sbjct: 185 APEVLDETIQVDCFDSYKRVDIWAFGLVLWEV 216
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/185 (23%), Positives = 81/185 (43%), Gaps = 25/185 (13%)
Query: 354 GTVTAIKRAKLGNTKGTDLVLNEVRILCQVNHRSLVRLLGCCVELDQTLMIYEYIPNGTL 413
G A+K L + +L+ NEV I+ H ++V + + ++ ++ E++ G L
Sbjct: 70 GRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHFNVVEMYKSYLVGEELWVLMEFLQGGAL 129
Query: 414 FDHLHCDFTGKWPPLPWHLRL------VIAHQIAEGLTYLHSAAVPPIYHRDVKSSNILL 467
D + +RL + + + L YLH+ V HRD+KS +ILL
Sbjct: 130 TDIVS------------QVRLNEEQIATVCEAVLQALAYLHAQGV---IHRDIKSDSILL 174
Query: 468 DEKLNAKVSDFGLSRLVERTETNDSHIFTTAQGTMGYLDPEYYRNFQLTDKSDVYSFGVV 527
K+SDFG + + + GT ++ PE + D++S G++
Sbjct: 175 TLDGRVKLSDFGFCAQISKDVPKRKXLV----GTPYWMAPEVISRSLYATEVDIWSLGIM 230
Query: 528 LLELL 532
++E++
Sbjct: 231 VIEMV 235
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 92/207 (44%), Gaps = 19/207 (9%)
Query: 360 KRAKLGNTKGT--DLVLNEVRILCQVNHRSLVRLLGCCVELDQTLMIYEYIPNGTLFDHL 417
KR + +G + + EV IL QV H +++ L ++I E + G LFD
Sbjct: 47 KRQSRASRRGVCREEIEREVSILRQVLHPNIITLHDVYENRTDVVLILELVSGGELFD-- 104
Query: 418 HCDFTGKWPPLPWHLRLVIAHQIAEGLTYLHSAAVPPIYHRDVKSSNI-LLDEKL---NA 473
F + L QI +G+ YLH+ I H D+K NI LLD+ + +
Sbjct: 105 ---FLAQKESLSEEEATSFIKQILDGVNYLHT---KKIAHFDLKPENIMLLDKNIPIPHI 158
Query: 474 KVSDFGLSRLVERTETNDSHIFTTAQGTMGYLDPEYYRNFQLTDKSDVYSFGVVLLELLT 533
K+ DFGL+ +E D F GT ++ PE L ++D++S GV+ LL+
Sbjct: 159 KLIDFGLAHEIE-----DGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLS 213
Query: 534 SKKAIDFNREEENVNLVVYMKKIMDEE 560
+ ++E + + + DEE
Sbjct: 214 GASPFLGDTKQETLANITAVSYDFDEE 240
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 95/208 (45%), Gaps = 27/208 (12%)
Query: 338 IGTGGFGEVFKGI-LDDGTVTAIKRAK--LGNTKGTDLVLNEVRILCQVNHRSLVRLLGC 394
+G+G +G V G A+K+ + E+R+L + H +++ LL
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 395 -----CVELDQTLMIYEYIPNGTLFDHLHCD-FTGKWPPLPWHLRLVIAHQIAEGLTYLH 448
+E + + ++ L + + C T H++ +I +QI GL Y+H
Sbjct: 90 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDD------HVQFLI-YQILRGLKYIH 142
Query: 449 SAAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDSHIFTTAQGTMGYLDPE 508
SA I HRD+K SN+ ++E K+ FGL+R T+D T T Y PE
Sbjct: 143 SA---DIIHRDLKPSNLAVNEDCELKILGFGLAR-----HTDDE--MTGYVATRWYRAPE 192
Query: 509 YYRNFQLTDKS-DVYSFGVVLLELLTSK 535
N+ +++ D++S G ++ ELLT +
Sbjct: 193 IMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2Y4I|B Chain B, Ksr2-Mek1 Heterodimer
Length = 319
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 83/210 (39%), Gaps = 26/210 (12%)
Query: 336 NLIGTGGFGEVFKGILDDGTVTAIKRAKLGNTKGTDLVLNEVRILCQVNHRSLVRLLGCC 395
LIG G FG+V+ G + + N EV Q H ++V +G C
Sbjct: 39 ELIGKGRFGQVYHGRWHGEVAIRLIDIERDNEDQLKAFKREVMAYRQTRHENVVLFMGAC 98
Query: 396 VELDQTLMIYEYIPNGTLFDHLHCDFTGKWPPLPWHLRLVIAHQIAEGLTYLHSAAVPPI 455
+ +I TL+ + L + IA +I +G+ YLH+ I
Sbjct: 99 MSPPHLAIITSLCKGRTLYSVVRDAKI----VLDVNKTRQIAQEIVKGMGYLHAKG---I 151
Query: 456 YHRDVKSSNILLDEKLNAKV--SDFGL---SRLVERTETNDSHIFTTAQGTMGYLDPEYY 510
H+D+KS N+ D N KV +DFGL S +++ D G + +L PE
Sbjct: 152 LHKDLKSKNVFYD---NGKVVITDFGLFSISGVLQAGRREDK--LRIQNGWLCHLAPEII 206
Query: 511 RNFQ---------LTDKSDVYSFGVVLLEL 531
R + SDV++ G + EL
Sbjct: 207 RQLSPDTEEDKLPFSKHSDVFALGTIWYEL 236
>pdb|3H9R|A Chain A, Crystal Structure Of The Kinase Domain Of Type I Activin
Receptor (Acvr1) In Complex With Fkbp12 And Dorsomorphin
Length = 330
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 94/212 (44%), Gaps = 29/212 (13%)
Query: 338 IGTGGFGEVFKGILDDGTVTAIKRAKLGNTKGTDLVLNEVRILCQV--NHRSLVRLLGCC 395
+G G +GEV++G V K+ +++ E + V H +++ +
Sbjct: 45 VGKGRYGEVWRGSWQGENVAV----KIFSSRDEKSWFRETELYNTVMLRHENILGFIASD 100
Query: 396 V----ELDQTLMIYEYIPNGTLFDHLHCDFTGKWPPLPWHLRLVIAHQIAEGLTYLH--- 448
+ Q +I Y G+L+D+L L R+V++ IA GL +LH
Sbjct: 101 MTSRHSSTQLWLITHYHEMGSLYDYLQLTTLDTVSCL----RIVLS--IASGLAHLHIEI 154
Query: 449 --SAAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDSHIFTTAQ-GTMGYL 505
+ P I HRD+KS NIL+ + ++D GL+ ++ TN + + GT Y+
Sbjct: 155 FGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLA-VMHSQSTNQLDVGNNPRVGTKRYM 213
Query: 506 DPEYYRN------FQLTDKSDVYSFGVVLLEL 531
PE F + D+++FG+VL E+
Sbjct: 214 APEVLDETIQVDCFDSYKRVDIWAFGLVLWEV 245
>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia
pdb|3GC0|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia In
Complex With Amp
Length = 329
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 61/239 (25%), Positives = 101/239 (42%), Gaps = 32/239 (13%)
Query: 308 LNAKAAGKSARIFTGKEIRRATNNFSKDNLIGTGGFGEVFKGILDDGTVT----AIKRAK 363
L A+ G + + + + + + +G G +GEV+K I TVT AIKR +
Sbjct: 12 LEAQTQGPGSMSVSAAPSATSIDRYRRITKLGEGTYGEVYKAI---DTVTNETVAIKRIR 68
Query: 364 LGNTK----GTDLVLNEVRILCQVNHRSLVRLLGCCVELDQTLMIYEYIPNGTLFDHLHC 419
L + + GT + EV +L ++ HR+++ L + +I+EY N
Sbjct: 69 LEHEEEGVPGT--AIREVSLLKELQHRNIIELKSVIHHNHRLHLIFEYAENDL------K 120
Query: 420 DFTGKWPPLPWHLRLVIAHQIAEGLTYLHSAAVPPIYHRDVKSSNILL-----DEKLNAK 474
+ K P + + +Q+ G+ + HS HRD+K N+LL E K
Sbjct: 121 KYMDKNPDVSMRVIKSFLYQLINGVNFCHSRRC---LHRDLKPQNLLLSVSDASETPVLK 177
Query: 475 VSDFGLSRLVERTETNDSHIFTTAQGTMGYLDPEYYRNFQLTDKS-DVYSFGVVLLELL 532
+ DFGL+R FT T+ Y PE + S D++S + E+L
Sbjct: 178 IGDFGLARAFGIPIRQ----FTHEIITLWYRPPEILLGSRHYSTSVDIWSIACIWAEML 232
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 95/208 (45%), Gaps = 27/208 (12%)
Query: 338 IGTGGFGEVFKGI-LDDGTVTAIKRAK--LGNTKGTDLVLNEVRILCQVNHRSLVRLLGC 394
+G+G +G V G A+K+ + E+R+L + H +++ LL
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 395 -----CVELDQTLMIYEYIPNGTLFDHLHCD-FTGKWPPLPWHLRLVIAHQIAEGLTYLH 448
+E + + ++ L + + C T H++ +I +QI GL Y+H
Sbjct: 90 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDD------HVQFLI-YQILRGLKYIH 142
Query: 449 SAAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDSHIFTTAQGTMGYLDPE 508
SA I HRD+K SN+ ++E K+ D GL+R T+D T T Y PE
Sbjct: 143 SA---DIIHRDLKPSNLAVNEDCELKILDAGLAR-----HTDDE--MTGYVATRWYRAPE 192
Query: 509 YYRNFQLTDKS-DVYSFGVVLLELLTSK 535
N+ +++ D++S G ++ ELLT +
Sbjct: 193 IMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 95/208 (45%), Gaps = 27/208 (12%)
Query: 338 IGTGGFGEVFKGI-LDDGTVTAIKRAK--LGNTKGTDLVLNEVRILCQVNHRSLVRLLGC 394
+G+G +G V G A+K+ + E+R+L + H +++ LL
Sbjct: 30 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 395 -----CVELDQTLMIYEYIPNGTLFDHLHCD-FTGKWPPLPWHLRLVIAHQIAEGLTYLH 448
+E + + ++ L + + C T H++ +I +QI GL Y+H
Sbjct: 90 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDD------HVQFLI-YQILRGLKYIH 142
Query: 449 SAAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDSHIFTTAQGTMGYLDPE 508
SA I HRD+K SN+ ++E K+ DF L+R T+D T T Y PE
Sbjct: 143 SA---DIIHRDLKPSNLAVNEDCELKILDFYLAR-----HTDDE--MTGYVATRWYRAPE 192
Query: 509 YYRNFQLTDKS-DVYSFGVVLLELLTSK 535
N+ +++ D++S G ++ ELLT +
Sbjct: 193 IMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 95/208 (45%), Gaps = 27/208 (12%)
Query: 338 IGTGGFGEVFKGI-LDDGTVTAIKRAK--LGNTKGTDLVLNEVRILCQVNHRSLVRLLGC 394
+G+G +G V G A+K+ + E+R+L + H +++ LL
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 395 -----CVELDQTLMIYEYIPNGTLFDHLHCD-FTGKWPPLPWHLRLVIAHQIAEGLTYLH 448
+E + + ++ L + + C T H++ +I +QI GL Y+H
Sbjct: 90 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDD------HVQFLI-YQILRGLKYIH 142
Query: 449 SAAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDSHIFTTAQGTMGYLDPE 508
SA I HRD+K SN+ ++E K+ D GL+R T+D T T Y PE
Sbjct: 143 SA---DIIHRDLKPSNLAVNEDCELKILDRGLAR-----HTDDE--MTGYVATRWYRAPE 192
Query: 509 YYRNFQLTDKS-DVYSFGVVLLELLTSK 535
N+ +++ D++S G ++ ELLT +
Sbjct: 193 IMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 59/259 (22%), Positives = 110/259 (42%), Gaps = 24/259 (9%)
Query: 327 RATNNFSKDNLIGTGGFGEVFKGI-LDDGTVTA---IKRAKLGNTKGTDLVLNEVRILCQ 382
R + + +G GGF + ++ +D V A + ++ L + + E+ I
Sbjct: 39 RTMKRYMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKS 98
Query: 383 VNHRSLVRLLGCCVELDQTLMIYEYIPNGTLFDHLHCDFTGKWPPLPWHLRLVIAHQIAE 442
+++ +V G + D ++ E +L + P + +R Q +
Sbjct: 99 LDNPHVVGFHGFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARYFMR-----QTIQ 153
Query: 443 GLTYLHSAAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDSHIFTTAQGTM 502
G+ YLH+ V HRD+K N+ L++ ++ K+ DFGL+ +E D T GT
Sbjct: 154 GVQYLHNNRV---IHRDLKLGNLFLNDDMDVKIGDFGLATKIE----FDGERKKTLCGTP 206
Query: 503 GYLDPEYYRNFQLTDKSDVYSFGVVLLELLTSKKAIDFNREEENVNLVVYMKKIMDEERL 562
Y+ PE + + D++S G +L LL K + + +E Y++ +E +
Sbjct: 207 NYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPPFETSCLKET-----YIRIKKNEYSV 261
Query: 563 MEVVDPV---LKERATHLD 578
++PV L R H D
Sbjct: 262 PRHINPVASALIRRMLHAD 280
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/106 (32%), Positives = 57/106 (53%), Gaps = 12/106 (11%)
Query: 431 HLRLVIAHQIAEGLTYLHSAAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVERTETN 490
H++ ++ +Q+ GL Y+HSA I HRD+K SN+ ++E ++ DFGL+R +
Sbjct: 124 HVQFLV-YQLLRGLKYIHSAG---IIHRDLKPSNVAVNEDCELRILDFGLARQADEE--- 176
Query: 491 DSHIFTTAQGTMGYLDPEYYRNFQLTDKS-DVYSFGVVLLELLTSK 535
T T Y PE N+ +++ D++S G ++ ELL K
Sbjct: 177 ----MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLQGK 218
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/229 (23%), Positives = 98/229 (42%), Gaps = 40/229 (17%)
Query: 329 TNNFSKDNLIGTGGFGEVFKGILD-DGTVTAIKRAKLGNTKGTDL-VLNEVRILCQVNHR 386
+++F +L+G G +G V G + AIK+ + + L L E++IL H
Sbjct: 10 SSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHE 69
Query: 387 SLVRLLGCC----------VELDQTLM---IYEYIPNGTLFDHLHCDFTGKWPPLPWHLR 433
+++ + V + Q LM ++ I L D H++
Sbjct: 70 NIITIFNIQRPDSFENFNEVYIIQELMQTDLHRVISTQMLSDD--------------HIQ 115
Query: 434 LVIAHQIAEGLTYLHSAAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDSH 493
I +Q + LH + V HRD+K SN+L++ + KV DFGL+R+++ + ++S
Sbjct: 116 YFI-YQTLRAVKVLHGSNV---IHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSE 171
Query: 494 IFTTAQGTMGYLDPEYYR-------NFQLTDKSDVYSFGVVLLELLTSK 535
G + +YR + + + DV+S G +L EL +
Sbjct: 172 PTGQQSGMTEXVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRR 220
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/208 (24%), Positives = 85/208 (40%), Gaps = 27/208 (12%)
Query: 338 IGTGGFGEV---FKGILDDGTVTAIKRAKLGNTKGTDLVLNEVRILCQVNHRSLVRLLGC 394
IG+G G V + +LD N E+ ++ VNH++++ LL
Sbjct: 25 IGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNV 84
Query: 395 CV------ELDQTLMIYEYIPNGTLFDHLHCDFTGKWPPLPWHLRL-VIAHQIAEGLTYL 447
E ++ E + + L + + H R+ + +Q+ G+ +L
Sbjct: 85 FTPQKTLEEFQDVYLVMELM-DANLXQVIQMELD--------HERMSYLLYQMLXGIKHL 135
Query: 448 HSAAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDSHIFTTAQGTMGYLDP 507
HSA I HRD+K SNI++ K+ DFGL+R S + T T Y P
Sbjct: 136 HSAG---IIHRDLKPSNIVVKSDXTLKILDFGLAR-----TAGTSFMMTPYVVTRYYRAP 187
Query: 508 EYYRNFQLTDKSDVYSFGVVLLELLTSK 535
E + D++S G ++ E++ K
Sbjct: 188 EVILGMGYKENVDIWSVGCIMGEMVRHK 215
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/208 (24%), Positives = 85/208 (40%), Gaps = 27/208 (12%)
Query: 338 IGTGGFGEV---FKGILDDGTVTAIKRAKLGNTKGTDLVLNEVRILCQVNHRSLVRLLGC 394
IG+G G V + +LD N E+ ++ VNH++++ LL
Sbjct: 32 IGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNV 91
Query: 395 CV------ELDQTLMIYEYIPNGTLFDHLHCDFTGKWPPLPWHLRL-VIAHQIAEGLTYL 447
E ++ E + + L + + H R+ + +Q+ G+ +L
Sbjct: 92 FTPQKTLEEFQDVYLVMELM-DANLXQVIQMELD--------HERMSYLLYQMLXGIKHL 142
Query: 448 HSAAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDSHIFTTAQGTMGYLDP 507
HSA I HRD+K SNI++ K+ DFGL+R S + T T Y P
Sbjct: 143 HSAG---IIHRDLKPSNIVVKSDXTLKILDFGLAR-----TAGTSFMMTPYVVTRYYRAP 194
Query: 508 EYYRNFQLTDKSDVYSFGVVLLELLTSK 535
E + D++S G ++ E++ K
Sbjct: 195 EVILGMGYKENVDIWSVGCIMGEMVRHK 222
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 95/208 (45%), Gaps = 27/208 (12%)
Query: 338 IGTGGFGEVFKGI-LDDGTVTAIKRAK--LGNTKGTDLVLNEVRILCQVNHRSLVRLLGC 394
+G+G +G V G A+K+ + E+R+L + H +++ LL
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 395 -----CVELDQTLMIYEYIPNGTLFDHLHCD-FTGKWPPLPWHLRLVIAHQIAEGLTYLH 448
+E + + ++ L + + C T H++ +I +QI GL Y+H
Sbjct: 90 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDD------HVQFLI-YQILRGLKYIH 142
Query: 449 SAAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDSHIFTTAQGTMGYLDPE 508
SA I HRD+K SN+ ++E K+ D GL+R T+D T T Y PE
Sbjct: 143 SA---DIIHRDLKPSNLAVNEDCELKILDGGLAR-----HTDDE--MTGYVATRWYRAPE 192
Query: 509 YYRNFQLTDKS-DVYSFGVVLLELLTSK 535
N+ +++ D++S G ++ ELLT +
Sbjct: 193 IMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 86/204 (42%), Gaps = 25/204 (12%)
Query: 338 IGTGGFGEV---FKGILDDGTVTAIKRAKLGNTKGTDLVLNEVRILCQVNHRSLVRLLGC 394
IG+G G V + IL+ N E+ ++ VNH++++ LL
Sbjct: 32 IGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKVVNHKNIIGLLNV 91
Query: 395 -----CVELDQTLMIYEYIPNGTLFDHLHCDFTGKWPPLPWHLRL-VIAHQIAEGLTYLH 448
+E Q + I + + L + + H R+ + +Q+ G+ +LH
Sbjct: 92 FTPQKSLEEFQDVYIVMELMDANLSQVIQMELD--------HERMSYLLYQMLVGIKHLH 143
Query: 449 SAAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDSHIFTTAQGTMGYLDPE 508
SA I HRD+K SNI++ K+ DFGL+R S + T T Y PE
Sbjct: 144 SAG---IIHRDLKPSNIVVKSDATLKILDFGLAR-----TAGTSFMMTPYVVTRYYRAPE 195
Query: 509 YYRNFQLTDKSDVYSFGVVLLELL 532
+ D++S GV++ E++
Sbjct: 196 VILGMGYKENVDIWSVGVIMGEMI 219
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 51/215 (23%), Positives = 94/215 (43%), Gaps = 20/215 (9%)
Query: 330 NNFSKDNLIGTGGFGEVFKGI-LDDGTVTAIKRAKLGNTKG--TDLVLNEVRILCQVNHR 386
+ K IG G +G VFK + + A+KR +L + L E+ +L ++ H+
Sbjct: 2 QKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHK 61
Query: 387 SLVRLLGCCVELDQTLMIYEYIPNG--TLFDHLHCDFTGKWPPLPWHLRLVIAHQIAEGL 444
++VRL + +++E+ FD + D + + Q+ +GL
Sbjct: 62 NIVRLHDVLHSDKKLTLVFEFCDQDLKKYFDSCNGDLDPE-------IVKSFLFQLLKGL 114
Query: 445 TYLHSAAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDSHIFTTAQGTMGY 504
+ HS V HRD+K N+L++ K++DFGL+R ++ T+ Y
Sbjct: 115 GFCHSRNV---LHRDLKPQNLLINRNGELKLADFGLARAFGIP----VRCYSAEVVTLWY 167
Query: 505 LDPEYYRNFQLTDKS-DVYSFGVVLLELLTSKKAI 538
P+ +L S D++S G + EL + + +
Sbjct: 168 RPPDVLFGAKLYSTSIDMWSAGCIFAELANAARPL 202
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/106 (32%), Positives = 57/106 (53%), Gaps = 12/106 (11%)
Query: 431 HLRLVIAHQIAEGLTYLHSAAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVERTETN 490
H++ ++ +Q+ GL Y+HSA I HRD+K SN+ ++E ++ DFGL+R +
Sbjct: 132 HVQFLV-YQLLRGLKYIHSAG---IIHRDLKPSNVAVNEDSELRILDFGLARQADEE--- 184
Query: 491 DSHIFTTAQGTMGYLDPEYYRNFQLTDKS-DVYSFGVVLLELLTSK 535
T T Y PE N+ +++ D++S G ++ ELL K
Sbjct: 185 ----MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLQGK 226
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 73/161 (45%), Gaps = 15/161 (9%)
Query: 376 EVRILCQVNHRSLVRLLGCCVELDQTLMIYEYIPNGTLFDHLHCDFTGKWPPLPWHLRLV 435
E RI + H ++VRL E ++++ + G LF+ D + ++
Sbjct: 53 EARICRLLKHPNIVRLHDSISEEGFHYLVFDLVTGGELFE----DIVAR----EYYSEAD 104
Query: 436 IAHQIAEGLTYLHSAAVPPIYHRDVKSSNILLDEKLNA---KVSDFGLSRLVERTETNDS 492
+H I + L ++ + I HRD+K N+LL K K++DFGL+ V+ D
Sbjct: 105 ASHCIQQILESVNHCHLNGIVHRDLKPENLLLASKSKGAAVKLADFGLAIEVQ----GDQ 160
Query: 493 HIFTTAQGTMGYLDPEYYRNFQLTDKSDVYSFGVVLLELLT 533
+ GT GYL PE R D+++ GV+L LL
Sbjct: 161 QAWFGFAGTPGYLSPEVLRKDPYGKPVDMWACGVILYILLV 201
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 86/204 (42%), Gaps = 25/204 (12%)
Query: 338 IGTGGFGEV---FKGILDDGTVTAIKRAKLGNTKGTDLVLNEVRILCQVNHRSLVRLLGC 394
IG+G G V + IL+ N E+ ++ VNH++++ LL
Sbjct: 32 IGSGAQGIVVAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKVVNHKNIIGLLNV 91
Query: 395 -----CVELDQTLMIYEYIPNGTLFDHLHCDFTGKWPPLPWHLRL-VIAHQIAEGLTYLH 448
+E Q + I + + L + + H R+ + +Q+ G+ +LH
Sbjct: 92 FTPQKSLEEFQDVYIVMELMDANLSQVIQMELD--------HERMSYLLYQMLVGIKHLH 143
Query: 449 SAAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDSHIFTTAQGTMGYLDPE 508
SA I HRD+K SNI++ K+ DFGL+R S + T T Y PE
Sbjct: 144 SAG---IIHRDLKPSNIVVKSDATLKILDFGLAR-----TAGTSFMMTPYVVTRYYRAPE 195
Query: 509 YYRNFQLTDKSDVYSFGVVLLELL 532
+ D++S GV++ E++
Sbjct: 196 VILGMGYKENVDIWSVGVIMGEMI 219
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 53/227 (23%), Positives = 101/227 (44%), Gaps = 20/227 (8%)
Query: 312 AAGKSARIFTGKEIRRATNNFSKDNLIGTGGFGEVFKGILDDGTVTAIKRAKL-GNTKGT 370
++G+ F G + K +G G +G V+K G + A+KR +L +G
Sbjct: 8 SSGRENLYFQG-----LMEKYQKLEKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGI 62
Query: 371 -DLVLNEVRILCQVNHRSLVRLLGCCVELDQTLMIYEYIPNGTLFDHLHCDFTGKWPPLP 429
+ E+ +L +++H ++V L+ +++E++ L L + TG L
Sbjct: 63 PSTAIREISLLKELHHPNIVSLIDVIHSERCLTLVFEFM-EKDLKKVLDENKTG----LQ 117
Query: 430 WHLRLVIAHQIAEGLTYLHSAAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVERTET 489
+ +Q+ G+ + H I HRD+K N+L++ K++DFGL+R
Sbjct: 118 DSQIKIYLYQLLRGVAHCHQHR---ILHRDLKPQNLLINSDGALKLADFGLARAFGIPVR 174
Query: 490 NDSHIFTTAQGTMGYLDPEYYRNFQLTDKS-DVYSFGVVLLELLTSK 535
+ +H T+ Y P+ + S D++S G + E++T K
Sbjct: 175 SYTHEVV----TLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGK 217
>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|F Chain F, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 305
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 96/211 (45%), Gaps = 24/211 (11%)
Query: 336 NLIGTGGFGEVFKGILDDGTVTAIKRA--------KLGNTKGTDLVLNEVRILCQVNHRS 387
+L+G G +G+V K +LD T+ +RA G V E+++L ++ H++
Sbjct: 11 DLLGEGSYGKV-KEVLDSETLC--RRAVKILKKKKLRRIPNGEANVKKEIQLLRRLRHKN 67
Query: 388 LVRLLGCCV--ELDQTLMIYEYIPNGTLFDHLHCDFTGKWPPLPWHLRLVIAHQIAEGLT 445
+++L+ E + M+ EY G + + L ++P H Q+ +GL
Sbjct: 68 VIQLVDVLYNEEKQKMYMVMEYCVCG-MQEMLDSVPEKRFPVCQAHGYFC---QLIDGLE 123
Query: 446 YLHSAAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDSHIFTTAQGTMGYL 505
YLHS I H+D+K N+LL K+S G++ + +D+ T+QG+ +
Sbjct: 124 YLHSQG---IVHKDIKPGNLLLTTGGTLKISALGVAEALHPFAADDT--CRTSQGSPAFQ 178
Query: 506 DPEYYRNFQLTD--KSDVYSFGVVLLELLTS 534
PE K D++S GV L + T
Sbjct: 179 PPEIANGLDTFSGFKVDIWSAGVTLYNITTG 209
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 57/221 (25%), Positives = 94/221 (42%), Gaps = 24/221 (10%)
Query: 323 KEIRRATNNFSKDNLIGTGGFGEV----FKGILDDGTVTAIKRAKLGNTKGTDLVLNEVR 378
+++R ++ +IG G FGEV K + + + ++ + E
Sbjct: 62 RDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERD 121
Query: 379 ILCQVNHRSLVRLLGCCVELDQTLMIYEYIPNGTLFDHL-HCDFTGKWPPLPWHLRLVIA 437
I+ N +V+L + M+ EY+P G L + + + D KW R A
Sbjct: 122 IMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSNYDVPEKWA------RFYTA 175
Query: 438 HQIAEGLTYLHSAAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDSHIFTT 497
++ L +HS HRDVK N+LLD+ + K++DFG + + T
Sbjct: 176 -EVVLALDAIHSMG---FIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRC---DT 228
Query: 498 AQGTMGYLDPEYYRNFQLTD-----KSDVYSFGVVLLELLT 533
A GT Y+ PE ++ Q D + D +S GV L E+L
Sbjct: 229 AVGTPDYISPEVLKS-QGGDGYYGRECDWWSVGVFLYEMLV 268
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/106 (32%), Positives = 57/106 (53%), Gaps = 12/106 (11%)
Query: 431 HLRLVIAHQIAEGLTYLHSAAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVERTETN 490
H++ ++ +Q+ GL Y+HSA I HRD+K SN+ ++E ++ DFGL+R +
Sbjct: 132 HVQFLV-YQLLRGLKYIHSAG---IIHRDLKPSNVAVNEDSELRILDFGLARQADEE--- 184
Query: 491 DSHIFTTAQGTMGYLDPEYYRNFQLTDKS-DVYSFGVVLLELLTSK 535
T T Y PE N+ +++ D++S G ++ ELL K
Sbjct: 185 ----MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLQGK 226
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 53/227 (23%), Positives = 101/227 (44%), Gaps = 20/227 (8%)
Query: 312 AAGKSARIFTGKEIRRATNNFSKDNLIGTGGFGEVFKGILDDGTVTAIKRAKL-GNTKGT 370
++G+ F G + K +G G +G V+K G + A+KR +L +G
Sbjct: 8 SSGRENLYFQG-----LMEKYQKLEKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGI 62
Query: 371 -DLVLNEVRILCQVNHRSLVRLLGCCVELDQTLMIYEYIPNGTLFDHLHCDFTGKWPPLP 429
+ E+ +L +++H ++V L+ +++E++ L L + TG L
Sbjct: 63 PSTAIREISLLKELHHPNIVSLIDVIHSERCLTLVFEFM-EKDLKKVLDENKTG----LQ 117
Query: 430 WHLRLVIAHQIAEGLTYLHSAAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVERTET 489
+ +Q+ G+ + H I HRD+K N+L++ K++DFGL+R
Sbjct: 118 DSQIKIYLYQLLRGVAHCHQHR---ILHRDLKPQNLLINSDGALKLADFGLARAFGIPVR 174
Query: 490 NDSHIFTTAQGTMGYLDPEYYRNFQLTDKS-DVYSFGVVLLELLTSK 535
+ +H T+ Y P+ + S D++S G + E++T K
Sbjct: 175 SYTHEVV----TLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGK 217
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 57/221 (25%), Positives = 94/221 (42%), Gaps = 24/221 (10%)
Query: 323 KEIRRATNNFSKDNLIGTGGFGEV----FKGILDDGTVTAIKRAKLGNTKGTDLVLNEVR 378
+++R ++ +IG G FGEV K + + + ++ + E
Sbjct: 67 RDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERD 126
Query: 379 ILCQVNHRSLVRLLGCCVELDQTLMIYEYIPNGTLFDHL-HCDFTGKWPPLPWHLRLVIA 437
I+ N +V+L + M+ EY+P G L + + + D KW R A
Sbjct: 127 IMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSNYDVPEKWA------RFYTA 180
Query: 438 HQIAEGLTYLHSAAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDSHIFTT 497
++ L +HS HRDVK N+LLD+ + K++DFG + + T
Sbjct: 181 -EVVLALDAIHSMG---FIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRC---DT 233
Query: 498 AQGTMGYLDPEYYRNFQLTD-----KSDVYSFGVVLLELLT 533
A GT Y+ PE ++ Q D + D +S GV L E+L
Sbjct: 234 AVGTPDYISPEVLKS-QGGDGYYGRECDWWSVGVFLYEMLV 273
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 93/214 (43%), Gaps = 24/214 (11%)
Query: 329 TNNFSKDNLIGTGGFGEVFKGI-LDDGTVTAIKRAKLGNTKGTDL-----VLNEVRILCQ 382
T+ + +G G F V + + + G A AK+ NTK + E RI
Sbjct: 3 TDEYQLFEELGKGAFSVVRRCMKIPTGQEYA---AKIINTKKLSARDHQKLEREARICRL 59
Query: 383 VNHRSLVRLLGCCVELDQTLMIYEYIPNGTLFDHLHCDFTGKWPPLPWHLRLVIAHQIAE 442
+ H ++VRL E ++++ + G LF+ D + ++ +H I +
Sbjct: 60 LKHPNIVRLHDSISEEGFHYLVFDLVTGGELFE----DIVAR----EYYSEADASHCIQQ 111
Query: 443 GLTYLHSAAVPPIYHRDVKSSNILLDEKLNA---KVSDFGLSRLVERTETNDSHIFTTAQ 499
L ++ + I HRD+K N+LL K K++DFGL+ V+ D +
Sbjct: 112 ILESVNHCHLNGIVHRDLKPENLLLASKSKGAAVKLADFGLAIEVQ----GDQQAWFGFA 167
Query: 500 GTMGYLDPEYYRNFQLTDKSDVYSFGVVLLELLT 533
GT GYL PE R D+++ GV+L LL
Sbjct: 168 GTPGYLSPEVLRKDPYGKPVDMWACGVILYILLV 201
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 92/207 (44%), Gaps = 24/207 (11%)
Query: 338 IGTGGFGEVFK----GILDDGTVTAIKRAKLGNTK---GTDLVLNEVRILCQVNHRSLVR 390
+G+G F V K G + IK+ +L +++ + + EV IL ++ H +++
Sbjct: 20 LGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNIIT 79
Query: 391 LLGCCVELDQTLMIYEYIPNGTLFDHLHCDFTGKWPPLPWHLRLVIAHQIAEGLTYLHSA 450
L ++I E + G LF DF + L QI +G+ YLHS
Sbjct: 80 LHDIFENKTDVVLILELVSGGELF-----DFLAEKESLTEDEATQFLKQILDGVHYLHSK 134
Query: 451 AVPPIYHRDVKSSNI-LLDEKL---NAKVSDFGLSRLVERTETNDSHIFTTAQGTMGYLD 506
+ H D+K NI LLD+ + K+ DFG++ +E F GT ++
Sbjct: 135 RIA---HFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNE-----FKNIFGTPEFVA 186
Query: 507 PEYYRNFQLTDKSDVYSFGVVLLELLT 533
PE L ++D++S GV+ LL+
Sbjct: 187 PEIVNYEPLGLEADMWSIGVITYILLS 213
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 57/221 (25%), Positives = 94/221 (42%), Gaps = 24/221 (10%)
Query: 323 KEIRRATNNFSKDNLIGTGGFGEV----FKGILDDGTVTAIKRAKLGNTKGTDLVLNEVR 378
+++R ++ +IG G FGEV K + + + ++ + E
Sbjct: 67 RDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERD 126
Query: 379 ILCQVNHRSLVRLLGCCVELDQTLMIYEYIPNGTLFDHL-HCDFTGKWPPLPWHLRLVIA 437
I+ N +V+L + M+ EY+P G L + + + D KW R A
Sbjct: 127 IMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSNYDVPEKWA------RFYTA 180
Query: 438 HQIAEGLTYLHSAAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDSHIFTT 497
++ L +HS HRDVK N+LLD+ + K++DFG + + T
Sbjct: 181 -EVVLALDAIHSMG---FIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCD---T 233
Query: 498 AQGTMGYLDPEYYRNFQLTD-----KSDVYSFGVVLLELLT 533
A GT Y+ PE ++ Q D + D +S GV L E+L
Sbjct: 234 AVGTPDYISPEVLKS-QGGDGYYGRECDWWSVGVFLYEMLV 273
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 91/207 (43%), Gaps = 24/207 (11%)
Query: 338 IGTGGFGEVFK----GILDDGTVTAIKRAKLGNTK---GTDLVLNEVRILCQVNHRSLVR 390
+G+G F V K G + IK+ +L +++ + + EV IL ++ H +++
Sbjct: 13 LGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNIIT 72
Query: 391 LLGCCVELDQTLMIYEYIPNGTLFDHLHCDFTGKWPPLPWHLRLVIAHQIAEGLTYLHSA 450
L ++I E + G LF DF + L QI +G+ YLHS
Sbjct: 73 LHDIFENKTDVVLILELVSGGELF-----DFLAEKESLTEDEATQFLKQILDGVHYLHSK 127
Query: 451 AVPPIYHRDVKSSNILLDEKL----NAKVSDFGLSRLVERTETNDSHIFTTAQGTMGYLD 506
+ H D+K NI+L +K K+ DFG++ +E F GT ++
Sbjct: 128 RIA---HFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNE-----FKNIFGTPEFVA 179
Query: 507 PEYYRNFQLTDKSDVYSFGVVLLELLT 533
PE L ++D++S GV+ LL+
Sbjct: 180 PEIVNYEPLGLEADMWSIGVITYILLS 206
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 50/208 (24%), Positives = 85/208 (40%), Gaps = 27/208 (12%)
Query: 338 IGTGGFGEV---FKGILDDGTVTAIKRAKLGNTKGTDLVLNEVRILCQVNHRSLVRLLGC 394
IG+G G V + +LD N E+ ++ VNH++++ LL
Sbjct: 32 IGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKXVNHKNIISLLNV 91
Query: 395 CV------ELDQTLMIYEYIPNGTLFDHLHCDFTGKWPPLPWHLRL-VIAHQIAEGLTYL 447
E ++ E + + L + + H R+ + +Q+ G+ +L
Sbjct: 92 FTPQKTLEEFQDVYLVMELM-DANLXQVIQMELD--------HERMSYLLYQMLCGIKHL 142
Query: 448 HSAAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDSHIFTTAQGTMGYLDP 507
HSA I HRD+K SNI++ K+ DFGL+R S + T T Y P
Sbjct: 143 HSAG---IIHRDLKPSNIVVKSDXTLKILDFGLAR-----TAGTSFMMTPYVVTRYYRAP 194
Query: 508 EYYRNFQLTDKSDVYSFGVVLLELLTSK 535
E + D++S G ++ E++ K
Sbjct: 195 EVILGMGYKENVDIWSVGCIMGEMVRHK 222
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 43/213 (20%), Positives = 89/213 (41%), Gaps = 16/213 (7%)
Query: 326 RRATNNFSKDNLIGTGGFGEVFKG----ILDDGTVTAIKRAKLGNTKGTDLVLNEVRILC 381
++ +F ++G G F V + + +++ + V E ++
Sbjct: 6 KKRPEDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMS 65
Query: 382 QVNHRSLVRLLGCCVELDQTLMIYEYIPNGTLFDHLHCDFTGKWPPLPWHLRLVIAHQIA 441
+++H V+L + ++ Y NG L ++ K +I
Sbjct: 66 RLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIR-----KIGSFDETCTRFYTAEIV 120
Query: 442 EGLTYLHSAAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVE-RTETNDSHIFTTAQG 500
L YLH I HRD+K NILL+E ++ +++DFG ++++ ++ ++ F G
Sbjct: 121 SALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFV---G 174
Query: 501 TMGYLDPEYYRNFQLTDKSDVYSFGVVLLELLT 533
T Y+ PE SD+++ G ++ +L+
Sbjct: 175 TAQYVSPELLTEKSACKSSDLWALGCIIYQLVA 207
>pdb|3SDJ|A Chain A, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|B Chain B, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|C Chain C, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|D Chain D, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|E Chain E, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|F Chain F, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|G Chain G, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|H Chain H, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|I Chain I, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|J Chain J, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|K Chain K, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|L Chain L, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|M Chain M, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|N Chain N, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
Length = 448
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 79/343 (23%), Positives = 141/343 (41%), Gaps = 48/343 (13%)
Query: 302 KQREEMLNAKAAGKSARIFTGKEIRRATNNFS-KDNLIGTGGFGEV-FKGILDDGTVTAI 359
K+R+ G+ +RI ++ N + ++G G G V F+G G A+
Sbjct: 4 KKRKRGSRGGKKGRKSRIANIPNFEQSLKNLVVSEKILGYGSSGTVVFQGSFQ-GRPVAV 62
Query: 360 KRAKLGNTKGTDLVLNEVRILCQVN-HRSLVRLLGCCVELDQTLMIYEYIPNGTLFDHL- 417
KR + D+ L E+++L + + H +++R C D+ L I + N L D +
Sbjct: 63 KRMLID---FCDIALMEIKLLTESDDHPNVIRYY-CSETTDRFLYIALELCNLNLQDLVE 118
Query: 418 -------HCDFTGKWPPLPWHLRLVIAHQIAEGLTYLHSAAVPPIYHRDVKSSNILLD-- 468
+ ++ P+ + QIA G+ +LHS I HRD+K NIL+
Sbjct: 119 SKNVSDENLKLQKEYNPIS------LLRQIASGVAHLHSLK---IIHRDLKPQNILVSTS 169
Query: 469 -----------EKLNAKVSDFGLSRLVERTETNDSHIFTTAQGTMGYLDPEYYRNF---Q 514
E L +SDFGL + ++ + GT G+ PE +
Sbjct: 170 SRFTADQQTGAENLRILISDFGLCKKLDSGQXXFRXNLNNPSGTSGWRAPELLEESTKRR 229
Query: 515 LTDKSDVYSFGVVLLELLTSKK---AIDFNREEENVNLVVY---MKKIMDEERLMEVVDP 568
LT D++S G V +L+ K ++RE + + MK + D + E D
Sbjct: 230 LTRSIDIFSMGCVFYYILSKGKHPFGDKYSRESNIIRGIFSLDEMKCLHDRSLIAEATD- 288
Query: 569 VLKERATHLDLETMKALGLLAASCLDERRQNRPSMKEVADEIE 611
++ + H L+ A+ +L + + + +V+D +E
Sbjct: 289 LISQMIDHDPLKRPTAMKVLRHPLFWPKSKKLEFLLKVSDRLE 331
>pdb|3FBV|A Chain A, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|B Chain B, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|C Chain C, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|D Chain D, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|E Chain E, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|F Chain F, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|G Chain G, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|H Chain H, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|I Chain I, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|J Chain J, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|K Chain K, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|L Chain L, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|M Chain M, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|N Chain N, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3SDM|A Chain A, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|B Chain B, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|C Chain C, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|D Chain D, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|E Chain E, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|F Chain F, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|G Chain G, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
Length = 448
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 79/343 (23%), Positives = 141/343 (41%), Gaps = 48/343 (13%)
Query: 302 KQREEMLNAKAAGKSARIFTGKEIRRATNNFS-KDNLIGTGGFGEV-FKGILDDGTVTAI 359
K+R+ G+ +RI ++ N + ++G G G V F+G G A+
Sbjct: 4 KKRKRGSRGGKKGRKSRIANIPNFEQSLKNLVVSEKILGYGSSGTVVFQGSFQ-GRPVAV 62
Query: 360 KRAKLGNTKGTDLVLNEVRILCQVN-HRSLVRLLGCCVELDQTLMIYEYIPNGTLFDHL- 417
KR + D+ L E+++L + + H +++R C D+ L I + N L D +
Sbjct: 63 KRMLID---FCDIALMEIKLLTESDDHPNVIRYY-CSETTDRFLYIALELCNLNLQDLVE 118
Query: 418 -------HCDFTGKWPPLPWHLRLVIAHQIAEGLTYLHSAAVPPIYHRDVKSSNILLD-- 468
+ ++ P+ + QIA G+ +LHS I HRD+K NIL+
Sbjct: 119 SKNVSDENLKLQKEYNPIS------LLRQIASGVAHLHSLK---IIHRDLKPQNILVSTS 169
Query: 469 -----------EKLNAKVSDFGLSRLVERTETNDSHIFTTAQGTMGYLDPEYYR---NFQ 514
E L +SDFGL + ++ + GT G+ PE +
Sbjct: 170 SRFTADQQTGAENLRILISDFGLCKKLDSGQXXFRXNLNNPSGTSGWRAPELLEESTKRR 229
Query: 515 LTDKSDVYSFGVVLLELLTSKK---AIDFNREEENVNLVVY---MKKIMDEERLMEVVDP 568
LT D++S G V +L+ K ++RE + + MK + D + E D
Sbjct: 230 LTRSIDIFSMGCVFYYILSKGKHPFGDKYSRESNIIRGIFSLDEMKCLHDRSLIAEATD- 288
Query: 569 VLKERATHLDLETMKALGLLAASCLDERRQNRPSMKEVADEIE 611
++ + H L+ A+ +L + + + +V+D +E
Sbjct: 289 LISQMIDHDPLKRPTAMKVLRHPLFWPKSKKLEFLLKVSDRLE 331
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 43/213 (20%), Positives = 89/213 (41%), Gaps = 16/213 (7%)
Query: 326 RRATNNFSKDNLIGTGGFGEVFKG----ILDDGTVTAIKRAKLGNTKGTDLVLNEVRILC 381
++ +F ++G G F V + + +++ + V E ++
Sbjct: 5 KKRPEDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMS 64
Query: 382 QVNHRSLVRLLGCCVELDQTLMIYEYIPNGTLFDHLHCDFTGKWPPLPWHLRLVIAHQIA 441
+++H V+L + ++ Y NG L ++ K +I
Sbjct: 65 RLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIR-----KIGSFDETCTRFYTAEIV 119
Query: 442 EGLTYLHSAAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVE-RTETNDSHIFTTAQG 500
L YLH I HRD+K NILL+E ++ +++DFG ++++ ++ ++ F G
Sbjct: 120 SALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFV---G 173
Query: 501 TMGYLDPEYYRNFQLTDKSDVYSFGVVLLELLT 533
T Y+ PE SD+++ G ++ +L+
Sbjct: 174 TAQYVSPELLTEKSACKSSDLWALGCIIYQLVA 206
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 39/163 (23%), Positives = 73/163 (44%), Gaps = 14/163 (8%)
Query: 373 VLNEVRILCQVNHRSLVRLLGCCVELDQTLMIYEYIPNGTLFDHLHCDFTGKWPPLPWHL 432
V E ++ +++H V+L + ++ Y NG L ++ K
Sbjct: 79 VTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGCLLKYIR-----KIGSFDETC 133
Query: 433 RLVIAHQIAEGLTYLHSAAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLV--ERTETN 490
+I L YLH I HRD+K NILL+E ++ +++DFG ++++ E +
Sbjct: 134 TRFYTAEIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQAR 190
Query: 491 DSHIFTTAQGTMGYLDPEYYRNFQLTDKSDVYSFGVVLLELLT 533
+ TAQ Y+ PE + SD+++ G ++ +L+
Sbjct: 191 ANSFVGTAQ----YVSPELLTEKSASKSSDLWALGCIIYQLVA 229
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 38/162 (23%), Positives = 73/162 (45%), Gaps = 12/162 (7%)
Query: 373 VLNEVRILCQVNHRSLVRLLGCCVELDQTLMIYEYIPNGTLFDHLHCDFTGKWPPLPWHL 432
V E ++ +++H V+L + ++ Y NG L ++ K
Sbjct: 79 VTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIR-----KIGSFDETC 133
Query: 433 RLVIAHQIAEGLTYLHSAAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVE-RTETND 491
+I L YLH I HRD+K NILL+E ++ +++DFG ++++ ++
Sbjct: 134 TRFYTAEIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQAR 190
Query: 492 SHIFTTAQGTMGYLDPEYYRNFQLTDKSDVYSFGVVLLELLT 533
++ F GT Y+ PE SD+++ G ++ +L+
Sbjct: 191 ANXFV---GTAQYVSPELLTEKSAXKSSDLWALGCIIYQLVA 229
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 49/165 (29%), Positives = 76/165 (46%), Gaps = 20/165 (12%)
Query: 376 EVRILCQV-NHRSLVRLLGCCVELDQTLMIYEYIPNGTLFDHLHCDFTGKWPPLPWHLRL 434
E IL QV H ++ L+ ++++ + G LFD+L T K R
Sbjct: 149 ETHILRQVAGHPHIITLIDSYESSSFMFLVFDLMRKGELFDYL----TEKVALSEKETR- 203
Query: 435 VIAHQIAEGLTYLHSAAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDSHI 494
I + E +++LH+ I HRD+K NILLD+ + ++SDFG S +E E
Sbjct: 204 SIMRSLLEAVSFLHANN---IVHRDLKPENILLDDNMQIRLSDFGFSCHLEPGEK----- 255
Query: 495 FTTAQGTMGYLDPEYYR------NFQLTDKSDVYSFGVVLLELLT 533
GT GYL PE + + + D+++ GV+L LL
Sbjct: 256 LRELCGTPGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLA 300
>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A
Novel Pyrrolopyrimidine Inhibitor
Length = 359
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 55/97 (56%), Gaps = 5/97 (5%)
Query: 437 AHQIAEGLTYLHSAAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDSHIFT 496
+ Q+A+G+ +L S HRD+ + NILL EK K+ DFGL+R + + D
Sbjct: 199 SFQVAKGMEFLASRKC---IHRDLAARNILLSEKNVVKICDFGLARDIYKDP--DYVRKG 253
Query: 497 TAQGTMGYLDPEYYRNFQLTDKSDVYSFGVVLLELLT 533
A+ + ++ PE + T +SDV+SFGV+L E+ +
Sbjct: 254 DARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 290
Score = 33.9 bits (76), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 47/101 (46%), Gaps = 14/101 (13%)
Query: 331 NFSKDNL-----IGTGGFGEVFK----GILDDGT--VTAIKRAKLGNTKGTDLVL-NEVR 378
F +D L +G G FG+V + GI T A+K K G T L +E++
Sbjct: 18 EFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELK 77
Query: 379 ILCQVNHR-SLVRLLGCCVELDQTLM-IYEYIPNGTLFDHL 417
IL + H ++V LLG C + LM I E+ G L +L
Sbjct: 78 ILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYL 118
>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
pdb|1Y6B|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
Length = 366
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 55/97 (56%), Gaps = 5/97 (5%)
Query: 437 AHQIAEGLTYLHSAAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDSHIFT 496
+ Q+A+G+ +L S HRD+ + NILL EK K+ DFGL+R + + D
Sbjct: 204 SFQVAKGMEFLASRKC---IHRDLAARNILLSEKNVVKICDFGLARDIYKDP--DYVRKG 258
Query: 497 TAQGTMGYLDPEYYRNFQLTDKSDVYSFGVVLLELLT 533
A+ + ++ PE + T +SDV+SFGV+L E+ +
Sbjct: 259 DARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 295
Score = 33.9 bits (76), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 47/101 (46%), Gaps = 14/101 (13%)
Query: 331 NFSKDNL-----IGTGGFGEVFK----GILDDGT--VTAIKRAKLGNTKGTDLVL-NEVR 378
F +D L +G G FG+V + GI T A+K K G T L +E++
Sbjct: 23 EFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELK 82
Query: 379 ILCQVNHR-SLVRLLGCCVELDQTLM-IYEYIPNGTLFDHL 417
IL + H ++V LLG C + LM I E+ G L +L
Sbjct: 83 ILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYL 123
>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With
Compound A
Length = 356
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 55/97 (56%), Gaps = 5/97 (5%)
Query: 437 AHQIAEGLTYLHSAAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDSHIFT 496
+ Q+A+G+ +L S HRD+ + NILL EK K+ DFGL+R + + D
Sbjct: 197 SFQVAKGMEFLASRKC---IHRDLAARNILLSEKNVVKICDFGLARDIYKDP--DYVRKG 251
Query: 497 TAQGTMGYLDPEYYRNFQLTDKSDVYSFGVVLLELLT 533
A+ + ++ PE + T +SDV+SFGV+L E+ +
Sbjct: 252 DARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 288
Score = 33.9 bits (76), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 47/101 (46%), Gaps = 14/101 (13%)
Query: 331 NFSKDNL-----IGTGGFGEVFK----GILDDGT--VTAIKRAKLGNTKGTDLVL-NEVR 378
F +D L +G G FG+V + GI T A+K K G T L +E++
Sbjct: 16 EFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELK 75
Query: 379 ILCQVNHR-SLVRLLGCCVELDQTLM-IYEYIPNGTLFDHL 417
IL + H ++V LLG C + LM I E+ G L +L
Sbjct: 76 ILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYL 116
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 43/213 (20%), Positives = 89/213 (41%), Gaps = 16/213 (7%)
Query: 326 RRATNNFSKDNLIGTGGFGEVFKG----ILDDGTVTAIKRAKLGNTKGTDLVLNEVRILC 381
++ +F ++G G F V + + +++ + V E ++
Sbjct: 4 KKRPEDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMS 63
Query: 382 QVNHRSLVRLLGCCVELDQTLMIYEYIPNGTLFDHLHCDFTGKWPPLPWHLRLVIAHQIA 441
+++H V+L + ++ Y NG L ++ K +I
Sbjct: 64 RLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIR-----KIGSFDETCTRFYTAEIV 118
Query: 442 EGLTYLHSAAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVE-RTETNDSHIFTTAQG 500
L YLH I HRD+K NILL+E ++ +++DFG ++++ ++ ++ F G
Sbjct: 119 SALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFV---G 172
Query: 501 TMGYLDPEYYRNFQLTDKSDVYSFGVVLLELLT 533
T Y+ PE SD+++ G ++ +L+
Sbjct: 173 TAQYVSPELLTEKSACKSSDLWALGCIIYQLVA 205
>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Back Pocket Binder
Length = 368
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 55/97 (56%), Gaps = 5/97 (5%)
Query: 437 AHQIAEGLTYLHSAAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDSHIFT 496
+ Q+A+G+ +L S HRD+ + NILL EK K+ DFGL+R + + D
Sbjct: 206 SFQVAKGMEFLASRKC---IHRDLAARNILLSEKNVVKICDFGLARDIYKDP--DYVRKG 260
Query: 497 TAQGTMGYLDPEYYRNFQLTDKSDVYSFGVVLLELLT 533
A+ + ++ PE + T +SDV+SFGV+L E+ +
Sbjct: 261 DARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 297
Score = 33.9 bits (76), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 47/101 (46%), Gaps = 14/101 (13%)
Query: 331 NFSKDNL-----IGTGGFGEVFK----GILDDGT--VTAIKRAKLGNTKGTDLVL-NEVR 378
F +D L +G G FG+V + GI T A+K K G T L +E++
Sbjct: 25 EFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELK 84
Query: 379 ILCQVNHR-SLVRLLGCCVELDQTLM-IYEYIPNGTLFDHL 417
IL + H ++V LLG C + LM I E+ G L +L
Sbjct: 85 ILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYL 125
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 43/213 (20%), Positives = 89/213 (41%), Gaps = 16/213 (7%)
Query: 326 RRATNNFSKDNLIGTGGFGEVFKG----ILDDGTVTAIKRAKLGNTKGTDLVLNEVRILC 381
++ +F ++G G F V + + +++ + V E ++
Sbjct: 3 KKRPEDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMS 62
Query: 382 QVNHRSLVRLLGCCVELDQTLMIYEYIPNGTLFDHLHCDFTGKWPPLPWHLRLVIAHQIA 441
+++H V+L + ++ Y NG L ++ K +I
Sbjct: 63 RLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIR-----KIGSFDETCTRFYTAEIV 117
Query: 442 EGLTYLHSAAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVE-RTETNDSHIFTTAQG 500
L YLH I HRD+K NILL+E ++ +++DFG ++++ ++ ++ F G
Sbjct: 118 SALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFV---G 171
Query: 501 TMGYLDPEYYRNFQLTDKSDVYSFGVVLLELLT 533
T Y+ PE SD+++ G ++ +L+
Sbjct: 172 TAQYVSPELLTEKSACKSSDLWALGCIIYQLVA 204
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 92/207 (44%), Gaps = 24/207 (11%)
Query: 338 IGTGGFGEVFK----GILDDGTVTAIKRAKLGNTK---GTDLVLNEVRILCQVNHRSLVR 390
+G+G F V K G + IK+ +L +++ + + EV IL ++ H +++
Sbjct: 34 LGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLXSSRRGVSREEIEREVNILREIRHPNIIT 93
Query: 391 LLGCCVELDQTLMIYEYIPNGTLFDHLHCDFTGKWPPLPWHLRLVIAHQIAEGLTYLHSA 450
L ++I E + G LF DF + L QI +G+ YLHS
Sbjct: 94 LHDIFENKTDVVLILELVSGGELF-----DFLAEKESLTEDEATQFLKQILDGVHYLHSK 148
Query: 451 AVPPIYHRDVKSSNI-LLDEKL---NAKVSDFGLSRLVERTETNDSHIFTTAQGTMGYLD 506
+ H D+K NI LLD+ + K+ DFG++ +E F GT ++
Sbjct: 149 RIA---HFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNE-----FKNIFGTPEFVA 200
Query: 507 PEYYRNFQLTDKSDVYSFGVVLLELLT 533
PE L ++D++S GV+ LL+
Sbjct: 201 PEIVNYEPLGLEADMWSIGVITYILLS 227
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 38/162 (23%), Positives = 73/162 (45%), Gaps = 12/162 (7%)
Query: 373 VLNEVRILCQVNHRSLVRLLGCCVELDQTLMIYEYIPNGTLFDHLHCDFTGKWPPLPWHL 432
V E ++ +++H V+L + ++ Y NG L ++ K
Sbjct: 79 VTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIR-----KIGSFDETC 133
Query: 433 RLVIAHQIAEGLTYLHSAAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVE-RTETND 491
+I L YLH I HRD+K NILL+E ++ +++DFG ++++ ++
Sbjct: 134 TRFYTAEIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQAR 190
Query: 492 SHIFTTAQGTMGYLDPEYYRNFQLTDKSDVYSFGVVLLELLT 533
++ F GT Y+ PE SD+++ G ++ +L+
Sbjct: 191 ANXFV---GTAQYVSPELLTEKSACKSSDLWALGCIIYQLVA 229
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 38/162 (23%), Positives = 73/162 (45%), Gaps = 12/162 (7%)
Query: 373 VLNEVRILCQVNHRSLVRLLGCCVELDQTLMIYEYIPNGTLFDHLHCDFTGKWPPLPWHL 432
V E ++ +++H V+L + ++ Y NG L ++ K
Sbjct: 82 VTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIR-----KIGSFDETC 136
Query: 433 RLVIAHQIAEGLTYLHSAAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVE-RTETND 491
+I L YLH I HRD+K NILL+E ++ +++DFG ++++ ++
Sbjct: 137 TRFYTAEIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQAR 193
Query: 492 SHIFTTAQGTMGYLDPEYYRNFQLTDKSDVYSFGVVLLELLT 533
++ F GT Y+ PE SD+++ G ++ +L+
Sbjct: 194 ANXFV---GTAQYVSPELLTEKSACKSSDLWALGCIIYQLVA 232
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 38/162 (23%), Positives = 73/162 (45%), Gaps = 12/162 (7%)
Query: 373 VLNEVRILCQVNHRSLVRLLGCCVELDQTLMIYEYIPNGTLFDHLHCDFTGKWPPLPWHL 432
V E ++ +++H V+L + ++ Y NG L ++ K
Sbjct: 79 VTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIR-----KIGSFDETC 133
Query: 433 RLVIAHQIAEGLTYLHSAAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVE-RTETND 491
+I L YLH I HRD+K NILL+E ++ +++DFG ++++ ++
Sbjct: 134 TRFYTAEIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQAR 190
Query: 492 SHIFTTAQGTMGYLDPEYYRNFQLTDKSDVYSFGVVLLELLT 533
++ F GT Y+ PE SD+++ G ++ +L+
Sbjct: 191 ANXFV---GTAQYVSPELLTEKSACKSSDLWALGCIIYQLVA 229
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 38/162 (23%), Positives = 73/162 (45%), Gaps = 12/162 (7%)
Query: 373 VLNEVRILCQVNHRSLVRLLGCCVELDQTLMIYEYIPNGTLFDHLHCDFTGKWPPLPWHL 432
V E ++ +++H V+L + ++ Y NG L ++ K
Sbjct: 80 VTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIR-----KIGSFDETC 134
Query: 433 RLVIAHQIAEGLTYLHSAAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVE-RTETND 491
+I L YLH I HRD+K NILL+E ++ +++DFG ++++ ++
Sbjct: 135 TRFYTAEIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQAR 191
Query: 492 SHIFTTAQGTMGYLDPEYYRNFQLTDKSDVYSFGVVLLELLT 533
++ F GT Y+ PE SD+++ G ++ +L+
Sbjct: 192 ANXFV---GTAQYVSPELLTEKSACKSSDLWALGCIIYQLVA 230
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 50/207 (24%), Positives = 86/207 (41%), Gaps = 25/207 (12%)
Query: 338 IGTGGFGEV---FKGILDDGTVTAIKRAKLGNTKGTDLVLNEVRILCQVNHRSLVRLLGC 394
IG+G G V + +LD N E+ ++ VNH++++ LL
Sbjct: 32 IGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKXVNHKNIISLLNV 91
Query: 395 -----CVELDQTLMIYEYIPNGTLFDHLHCDFTGKWPPLPWHLRL-VIAHQIAEGLTYLH 448
+E Q + + + + L + + H R+ + +Q+ G+ +LH
Sbjct: 92 FTPQKTLEEFQDVYLVMELMDANLCQVIQMELD--------HERMSYLLYQMLCGIKHLH 143
Query: 449 SAAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDSHIFTTAQGTMGYLDPE 508
SA I HRD+K SNI++ K+ DFGL+R S + T T Y PE
Sbjct: 144 SAG---IIHRDLKPSNIVVKSDXTLKILDFGLAR-----TAGTSFMMTPYVVTRYYRAPE 195
Query: 509 YYRNFQLTDKSDVYSFGVVLLELLTSK 535
+ D++S G ++ E++ K
Sbjct: 196 VILGMGYKENVDIWSVGCIMGEMVRHK 222
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 58/259 (22%), Positives = 109/259 (42%), Gaps = 24/259 (9%)
Query: 327 RATNNFSKDNLIGTGGFGEVFKGI-LDDGTVTA---IKRAKLGNTKGTDLVLNEVRILCQ 382
R + + +G GGF + ++ +D V A + ++ L + + E+ I
Sbjct: 39 RTMKRYMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKS 98
Query: 383 VNHRSLVRLLGCCVELDQTLMIYEYIPNGTLFDHLHCDFTGKWPPLPWHLRLVIAHQIAE 442
+++ +V G + D ++ E +L + P + +R Q +
Sbjct: 99 LDNPHVVGFHGFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARYFMR-----QTIQ 153
Query: 443 GLTYLHSAAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDSHIFTTAQGTM 502
G+ YLH+ V HRD+K N+ L++ ++ K+ DFGL+ +E D GT
Sbjct: 154 GVQYLHNNRV---IHRDLKLGNLFLNDDMDVKIGDFGLATKIE----FDGERKKXLCGTP 206
Query: 503 GYLDPEYYRNFQLTDKSDVYSFGVVLLELLTSKKAIDFNREEENVNLVVYMKKIMDEERL 562
Y+ PE + + D++S G +L LL K + + +E Y++ +E +
Sbjct: 207 NYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPPFETSCLKET-----YIRIKKNEYSV 261
Query: 563 MEVVDPV---LKERATHLD 578
++PV L R H D
Sbjct: 262 PRHINPVASALIRRMLHAD 280
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 39/163 (23%), Positives = 72/163 (44%), Gaps = 14/163 (8%)
Query: 373 VLNEVRILCQVNHRSLVRLLGCCVELDQTLMIYEYIPNGTLFDHLHCDFTGKWPPLPWHL 432
V E ++ +++H V+L + ++ Y NG L ++ K
Sbjct: 80 VTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIR-----KIGSFDETC 134
Query: 433 RLVIAHQIAEGLTYLHSAAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLV--ERTETN 490
+I L YLH I HRD+K NILL+E ++ +++DFG ++++ E +
Sbjct: 135 TRFYTAEIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQAR 191
Query: 491 DSHIFTTAQGTMGYLDPEYYRNFQLTDKSDVYSFGVVLLELLT 533
+ TAQ Y+ PE SD+++ G ++ +L+
Sbjct: 192 ANSFVGTAQ----YVSPELLTEKSACKSSDLWALGCIIYQLVA 230
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 38/162 (23%), Positives = 73/162 (45%), Gaps = 12/162 (7%)
Query: 373 VLNEVRILCQVNHRSLVRLLGCCVELDQTLMIYEYIPNGTLFDHLHCDFTGKWPPLPWHL 432
V E ++ +++H V+L + ++ Y NG L ++ K
Sbjct: 79 VTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIR-----KIGSFDETC 133
Query: 433 RLVIAHQIAEGLTYLHSAAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVE-RTETND 491
+I L YLH I HRD+K NILL+E ++ +++DFG ++++ ++
Sbjct: 134 TRFYTAEIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQAR 190
Query: 492 SHIFTTAQGTMGYLDPEYYRNFQLTDKSDVYSFGVVLLELLT 533
++ F GT Y+ PE SD+++ G ++ +L+
Sbjct: 191 ANXFV---GTAQYVSPELLTEKSACKSSDLWALGCIIYQLVA 229
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 38/162 (23%), Positives = 73/162 (45%), Gaps = 12/162 (7%)
Query: 373 VLNEVRILCQVNHRSLVRLLGCCVELDQTLMIYEYIPNGTLFDHLHCDFTGKWPPLPWHL 432
V E ++ +++H V+L + ++ Y NG L ++ K
Sbjct: 77 VTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIR-----KIGSFDETC 131
Query: 433 RLVIAHQIAEGLTYLHSAAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVE-RTETND 491
+I L YLH I HRD+K NILL+E ++ +++DFG ++++ ++
Sbjct: 132 TRFYTAEIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQAR 188
Query: 492 SHIFTTAQGTMGYLDPEYYRNFQLTDKSDVYSFGVVLLELLT 533
++ F GT Y+ PE SD+++ G ++ +L+
Sbjct: 189 ANAFV---GTAQYVSPELLTEKSACKSSDLWALGCIIYQLVA 227
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 38/162 (23%), Positives = 73/162 (45%), Gaps = 12/162 (7%)
Query: 373 VLNEVRILCQVNHRSLVRLLGCCVELDQTLMIYEYIPNGTLFDHLHCDFTGKWPPLPWHL 432
V E ++ +++H V+L + ++ Y NG L ++ K
Sbjct: 77 VTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIR-----KIGSFDETC 131
Query: 433 RLVIAHQIAEGLTYLHSAAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVE-RTETND 491
+I L YLH I HRD+K NILL+E ++ +++DFG ++++ ++
Sbjct: 132 TRFYTAEIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQAR 188
Query: 492 SHIFTTAQGTMGYLDPEYYRNFQLTDKSDVYSFGVVLLELLT 533
++ F GT Y+ PE SD+++ G ++ +L+
Sbjct: 189 ANXFV---GTAQYVSPELLTEKSACKSSDLWALGCIIYQLVA 227
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/162 (23%), Positives = 73/162 (45%), Gaps = 12/162 (7%)
Query: 373 VLNEVRILCQVNHRSLVRLLGCCVELDQTLMIYEYIPNGTLFDHLHCDFTGKWPPLPWHL 432
V E ++ +++H V+L + ++ Y NG L ++ K
Sbjct: 77 VTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIR-----KIGSFDETC 131
Query: 433 RLVIAHQIAEGLTYLHSAAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVE-RTETND 491
+I L YLH I HRD+K NILL+E ++ +++DFG ++++ ++
Sbjct: 132 TRFYTAEIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQAR 188
Query: 492 SHIFTTAQGTMGYLDPEYYRNFQLTDKSDVYSFGVVLLELLT 533
++ F GT Y+ PE SD+++ G ++ +L+
Sbjct: 189 ANXFV---GTAQYVSPELLTEKSACKSSDLWALGCIIYQLVA 227
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/252 (21%), Positives = 96/252 (38%), Gaps = 27/252 (10%)
Query: 294 KETKKLLIKQREEMLNAKAAGKSARIFTGKEIRRATNNFSKDNLIGTGGFGEV---FKGI 350
K+ I + M +K + + G + IG+G G V + +
Sbjct: 26 KQVDVSYIAKHYNMSKSKVDNQFYSVEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAV 85
Query: 351 LDDGTVTAIKRAKLGNTKGTDLVLNEVRILCQVNHRSLVRLLGCCV------ELDQTLMI 404
LD N E+ ++ VNH++++ LL E ++
Sbjct: 86 LDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLV 145
Query: 405 YEYIPNGTLFDHLHCDFTGKWPPLPWHLRL-VIAHQIAEGLTYLHSAAVPPIYHRDVKSS 463
E + + L + + H R+ + +Q+ G+ +LHSA I HRD+K S
Sbjct: 146 MELM-DANLCQVIQMELD--------HERMSYLLYQMLCGIKHLHSAG---IIHRDLKPS 193
Query: 464 NILLDEKLNAKVSDFGLSRLVERTETNDSHIFTTAQGTMGYLDPEYYRNFQLTDKSDVYS 523
NI++ K+ DFGL+R S + T T Y PE + D++S
Sbjct: 194 NIVVKSDCTLKILDFGLAR-----TAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWS 248
Query: 524 FGVVLLELLTSK 535
G ++ E++ K
Sbjct: 249 VGCIMGEMVRHK 260
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/162 (23%), Positives = 73/162 (45%), Gaps = 12/162 (7%)
Query: 373 VLNEVRILCQVNHRSLVRLLGCCVELDQTLMIYEYIPNGTLFDHLHCDFTGKWPPLPWHL 432
V E ++ +++H V+L + ++ Y NG L ++ K
Sbjct: 77 VTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIR-----KIGSFDETC 131
Query: 433 RLVIAHQIAEGLTYLHSAAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVE-RTETND 491
+I L YLH I HRD+K NILL+E ++ +++DFG ++++ ++
Sbjct: 132 TRFYTAEIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQAR 188
Query: 492 SHIFTTAQGTMGYLDPEYYRNFQLTDKSDVYSFGVVLLELLT 533
++ F GT Y+ PE SD+++ G ++ +L+
Sbjct: 189 ANXFV---GTAQYVSPELLTEKSACKSSDLWALGCIIYQLVA 227
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/162 (23%), Positives = 73/162 (45%), Gaps = 12/162 (7%)
Query: 373 VLNEVRILCQVNHRSLVRLLGCCVELDQTLMIYEYIPNGTLFDHLHCDFTGKWPPLPWHL 432
V E ++ +++H V+L + ++ Y NG L ++ K
Sbjct: 79 VTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIR-----KIGSFDETC 133
Query: 433 RLVIAHQIAEGLTYLHSAAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVE-RTETND 491
+I L YLH I HRD+K NILL+E ++ +++DFG ++++ ++
Sbjct: 134 TRFYTAEIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQAR 190
Query: 492 SHIFTTAQGTMGYLDPEYYRNFQLTDKSDVYSFGVVLLELLT 533
++ F GT Y+ PE SD+++ G ++ +L+
Sbjct: 191 ANXFV---GTAQYVSPELLTEKSACKSSDLWALGCIIYQLVA 229
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/161 (25%), Positives = 74/161 (45%), Gaps = 18/161 (11%)
Query: 373 VLNEVRILCQVNHRSLVRLLGCCVE--LDQTLMIYEYIPNGTLFDHLHCDFTGKWPPLPW 430
V E+ IL +++H ++V+L+ + D M++E + G + + PL
Sbjct: 83 VYQEIAILKKLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVME------VPTLKPLSE 136
Query: 431 HLRLVIAHQIAEGLTYLHSAAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVERTETN 490
+ +G+ YLH I HRD+K SN+L+ E + K++DFG+S + ++
Sbjct: 137 DQARFYFQDLIKGIEYLHYQK---IIHRDIKPSNLLVGEDGHIKIADFGVSNEFKGSDA- 192
Query: 491 DSHIFTTAQGTMGYLDPEYY---RNFQLTDKSDVYSFGVVL 528
+ + GT ++ PE R DV++ GV L
Sbjct: 193 ---LLSNTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTL 230
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/252 (21%), Positives = 96/252 (38%), Gaps = 27/252 (10%)
Query: 294 KETKKLLIKQREEMLNAKAAGKSARIFTGKEIRRATNNFSKDNLIGTGGFGEV---FKGI 350
K+ I + M +K + + G + IG+G G V + +
Sbjct: 26 KQVDVSYIAKHYNMSKSKVDNQFYSVEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAV 85
Query: 351 LDDGTVTAIKRAKLGNTKGTDLVLNEVRILCQVNHRSLVRLLGCCV------ELDQTLMI 404
LD N E+ ++ VNH++++ LL E ++
Sbjct: 86 LDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLV 145
Query: 405 YEYIPNGTLFDHLHCDFTGKWPPLPWHLRL-VIAHQIAEGLTYLHSAAVPPIYHRDVKSS 463
E + + L + + H R+ + +Q+ G+ +LHSA I HRD+K S
Sbjct: 146 MELM-DANLCQVIQMELD--------HERMSYLLYQMLCGIKHLHSAG---IIHRDLKPS 193
Query: 464 NILLDEKLNAKVSDFGLSRLVERTETNDSHIFTTAQGTMGYLDPEYYRNFQLTDKSDVYS 523
NI++ K+ DFGL+R S + T T Y PE + D++S
Sbjct: 194 NIVVKSDCTLKILDFGLAR-----TAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWS 248
Query: 524 FGVVLLELLTSK 535
G ++ E++ K
Sbjct: 249 VGCIMGEMVRHK 260
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 91/206 (44%), Gaps = 29/206 (14%)
Query: 338 IGTGGFGEV---FKGILDDGTVTAIKRAK--LGNTKGTDLVLNEVRILCQVNHRSLVRLL 392
IG+G G V F +L G A+K+ N E+ +L VNH++++ LL
Sbjct: 30 IGSGAQGIVCAAFDTVL--GINVAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKNIISLL 87
Query: 393 GC-----CVELDQTLMIYEYIPNGTLFDHLHCDFTGKWPPLPWHLRL-VIAHQIAEGLTY 446
+E Q + + + + L +H + H R+ + +Q+ G+ +
Sbjct: 88 NVFTPQKTLEEFQDVYLVMELMDANLCQVIHMELD--------HERMSYLLYQMLCGIKH 139
Query: 447 LHSAAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDSHIFTTAQGTMGYLD 506
LHSA I HRD+K SNI++ K+ DFGL+R + + + T T Y
Sbjct: 140 LHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLAR-----TASTNFMMTPYVVTRYYRA 191
Query: 507 PEYYRNFQLTDKSDVYSFGVVLLELL 532
PE + D++S G ++ EL+
Sbjct: 192 PEVILGMGYKENVDIWSVGCIMGELV 217
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/213 (23%), Positives = 91/213 (42%), Gaps = 16/213 (7%)
Query: 327 RATNNFSKDNLIGTGGFGEVFKGI-LDDGTVTA---IKRAKLGNTKGTDLVLNEVRILCQ 382
R + + +G GGF + ++ +D V A + ++ L + + E+ I
Sbjct: 39 RTMKRYMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKS 98
Query: 383 VNHRSLVRLLGCCVELDQTLMIYEYIPNGTLFDHLHCDFTGKWPPLPWHLRLVIAHQIAE 442
+++ +V G + D ++ E +L + P + +R Q +
Sbjct: 99 LDNPHVVGFHGFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARYFMR-----QTIQ 153
Query: 443 GLTYLHSAAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDSHIFTTAQGTM 502
G+ YLH+ V HRD+K N+ L++ ++ K+ DFGL+ +E D GT
Sbjct: 154 GVQYLHNNRV---IHRDLKLGNLFLNDDMDVKIGDFGLATKIE----FDGERKKDLCGTP 206
Query: 503 GYLDPEYYRNFQLTDKSDVYSFGVVLLELLTSK 535
Y+ PE + + D++S G +L LL K
Sbjct: 207 NYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGK 239
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/208 (24%), Positives = 85/208 (40%), Gaps = 27/208 (12%)
Query: 338 IGTGGFGEV---FKGILDDGTVTAIKRAKLGNTKGTDLVLNEVRILCQVNHRSLVRLLGC 394
IG+G G V + +LD N E+ ++ VNH++++ LL
Sbjct: 31 IGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNV 90
Query: 395 CV------ELDQTLMIYEYIPNGTLFDHLHCDFTGKWPPLPWHLRL-VIAHQIAEGLTYL 447
E ++ E + + L + + H R+ + +Q+ G+ +L
Sbjct: 91 FTPQKTLEEFQDVYLVMELM-DANLCQVIQMELD--------HERMSYLLYQMLCGIKHL 141
Query: 448 HSAAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDSHIFTTAQGTMGYLDP 507
HSA I HRD+K SNI++ K+ DFGL+R S + T T Y P
Sbjct: 142 HSAG---IIHRDLKPSNIVVKSDCTLKILDFGLAR-----TAGTSFMMTPYVVTRYYRAP 193
Query: 508 EYYRNFQLTDKSDVYSFGVVLLELLTSK 535
E + D++S G ++ E++ K
Sbjct: 194 EVILGMGYKENVDIWSVGCIMGEMVRHK 221
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/208 (24%), Positives = 85/208 (40%), Gaps = 27/208 (12%)
Query: 338 IGTGGFGEV---FKGILDDGTVTAIKRAKLGNTKGTDLVLNEVRILCQVNHRSLVRLLGC 394
IG+G G V + +LD N E+ ++ VNH++++ LL
Sbjct: 26 IGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNV 85
Query: 395 CV------ELDQTLMIYEYIPNGTLFDHLHCDFTGKWPPLPWHLRL-VIAHQIAEGLTYL 447
E ++ E + + L + + H R+ + +Q+ G+ +L
Sbjct: 86 FTPQKTLEEFQDVYLVMELM-DANLCQVIQMELD--------HERMSYLLYQMLCGIKHL 136
Query: 448 HSAAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDSHIFTTAQGTMGYLDP 507
HSA I HRD+K SNI++ K+ DFGL+R S + T T Y P
Sbjct: 137 HSAG---IIHRDLKPSNIVVKSDCTLKILDFGLAR-----TAGTSFMMTPYVVTRYYRAP 188
Query: 508 EYYRNFQLTDKSDVYSFGVVLLELLTSK 535
E + D++S G ++ E++ K
Sbjct: 189 EVILGMGYKENVDIWSVGCIMGEMVRHK 216
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/208 (24%), Positives = 85/208 (40%), Gaps = 27/208 (12%)
Query: 338 IGTGGFGEV---FKGILDDGTVTAIKRAKLGNTKGTDLVLNEVRILCQVNHRSLVRLLGC 394
IG+G G V + +LD N E+ ++ VNH++++ LL
Sbjct: 32 IGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNV 91
Query: 395 CV------ELDQTLMIYEYIPNGTLFDHLHCDFTGKWPPLPWHLRL-VIAHQIAEGLTYL 447
E ++ E + + L + + H R+ + +Q+ G+ +L
Sbjct: 92 FTPQKTLEEFQDVYLVMELM-DANLCQVIQMELD--------HERMSYLLYQMLCGIKHL 142
Query: 448 HSAAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDSHIFTTAQGTMGYLDP 507
HSA I HRD+K SNI++ K+ DFGL+R S + T T Y P
Sbjct: 143 HSAG---IIHRDLKPSNIVVKSDCTLKILDFGLAR-----TAGTSFMMTPYVVTRYYRAP 194
Query: 508 EYYRNFQLTDKSDVYSFGVVLLELLTSK 535
E + D++S G ++ E++ K
Sbjct: 195 EVILGMGYKENVDIWSVGCIMGEMVRHK 222
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/208 (24%), Positives = 85/208 (40%), Gaps = 27/208 (12%)
Query: 338 IGTGGFGEV---FKGILDDGTVTAIKRAKLGNTKGTDLVLNEVRILCQVNHRSLVRLLGC 394
IG+G G V + +LD N E+ ++ VNH++++ LL
Sbjct: 33 IGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNV 92
Query: 395 CV------ELDQTLMIYEYIPNGTLFDHLHCDFTGKWPPLPWHLRL-VIAHQIAEGLTYL 447
E ++ E + + L + + H R+ + +Q+ G+ +L
Sbjct: 93 FTPQKTLEEFQDVYLVMELM-DANLCQVIQMELD--------HERMSYLLYQMLCGIKHL 143
Query: 448 HSAAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDSHIFTTAQGTMGYLDP 507
HSA I HRD+K SNI++ K+ DFGL+R S + T T Y P
Sbjct: 144 HSAG---IIHRDLKPSNIVVKSDCTLKILDFGLAR-----TAGTSFMMTPYVVTRYYRAP 195
Query: 508 EYYRNFQLTDKSDVYSFGVVLLELLTSK 535
E + D++S G ++ E++ K
Sbjct: 196 EVILGMGYKENVDIWSVGCIMGEMVRHK 223
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/208 (24%), Positives = 85/208 (40%), Gaps = 27/208 (12%)
Query: 338 IGTGGFGEV---FKGILDDGTVTAIKRAKLGNTKGTDLVLNEVRILCQVNHRSLVRLLGC 394
IG+G G V + +LD N E+ ++ VNH++++ LL
Sbjct: 32 IGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNV 91
Query: 395 CV------ELDQTLMIYEYIPNGTLFDHLHCDFTGKWPPLPWHLRL-VIAHQIAEGLTYL 447
E ++ E + + L + + H R+ + +Q+ G+ +L
Sbjct: 92 FTPQKTLEEFQDVYLVMELM-DANLCQVIQMELD--------HERMSYLLYQMLCGIKHL 142
Query: 448 HSAAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDSHIFTTAQGTMGYLDP 507
HSA I HRD+K SNI++ K+ DFGL+R S + T T Y P
Sbjct: 143 HSAG---IIHRDLKPSNIVVKSDCTLKILDFGLAR-----TAGTSFMMTPYVVTRYYRAP 194
Query: 508 EYYRNFQLTDKSDVYSFGVVLLELLTSK 535
E + D++S G ++ E++ K
Sbjct: 195 EVILGMGYKENVDIWSVGCIMGEMVRHK 222
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/208 (24%), Positives = 85/208 (40%), Gaps = 27/208 (12%)
Query: 338 IGTGGFGEV---FKGILDDGTVTAIKRAKLGNTKGTDLVLNEVRILCQVNHRSLVRLLGC 394
IG+G G V + +LD N E+ ++ VNH++++ LL
Sbjct: 25 IGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNV 84
Query: 395 CV------ELDQTLMIYEYIPNGTLFDHLHCDFTGKWPPLPWHLRL-VIAHQIAEGLTYL 447
E ++ E + + L + + H R+ + +Q+ G+ +L
Sbjct: 85 FTPQKTLEEFQDVYLVMELM-DANLCQVIQMELD--------HERMSYLLYQMLCGIKHL 135
Query: 448 HSAAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDSHIFTTAQGTMGYLDP 507
HSA I HRD+K SNI++ K+ DFGL+R S + T T Y P
Sbjct: 136 HSAG---IIHRDLKPSNIVVKSDCTLKILDFGLAR-----TAGTSFMMTPYVVTRYYRAP 187
Query: 508 EYYRNFQLTDKSDVYSFGVVLLELLTSK 535
E + D++S G ++ E++ K
Sbjct: 188 EVILGMGYKENVDIWSVGCIMGEMVRHK 215
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/204 (24%), Positives = 85/204 (41%), Gaps = 25/204 (12%)
Query: 338 IGTGGFGEV---FKGILDDGTVTAIKRAKLGNTKGTDLVLNEVRILCQVNHRSLVRLLGC 394
IG+G G V + IL+ N E+ ++ VNH++++ LL
Sbjct: 32 IGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKVVNHKNIIGLLNV 91
Query: 395 -----CVELDQTLMIYEYIPNGTLFDHLHCDFTGKWPPLPWHLRL-VIAHQIAEGLTYLH 448
+E Q + I + + L + + H R+ + +Q+ G+ +LH
Sbjct: 92 FTPQKSLEEFQDVYIVMELMDANLSQVIQMELD--------HERMSYLLYQMLVGIKHLH 143
Query: 449 SAAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDSHIFTTAQGTMGYLDPE 508
SA I HRD+K SNI++ K+ DFGL+R S + T T Y PE
Sbjct: 144 SAG---IIHRDLKPSNIVVKSDATLKILDFGLAR-----TAGTSFMMTPYVVTRYYRAPE 195
Query: 509 YYRNFQLTDKSDVYSFGVVLLELL 532
+ D++S G ++ E++
Sbjct: 196 VILGMGYKENVDIWSVGCIMGEMI 219
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/208 (24%), Positives = 85/208 (40%), Gaps = 27/208 (12%)
Query: 338 IGTGGFGEV---FKGILDDGTVTAIKRAKLGNTKGTDLVLNEVRILCQVNHRSLVRLLGC 394
IG+G G V + +LD N E+ ++ VNH++++ LL
Sbjct: 33 IGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNV 92
Query: 395 CV------ELDQTLMIYEYIPNGTLFDHLHCDFTGKWPPLPWHLRL-VIAHQIAEGLTYL 447
E ++ E + + L + + H R+ + +Q+ G+ +L
Sbjct: 93 FTPQKTLEEFQDVYLVMELM-DANLCQVIQMELD--------HERMSYLLYQMLCGIKHL 143
Query: 448 HSAAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDSHIFTTAQGTMGYLDP 507
HSA I HRD+K SNI++ K+ DFGL+R S + T T Y P
Sbjct: 144 HSAG---IIHRDLKPSNIVVKSDCTLKILDFGLAR-----TAGTSFMMTPYVVTRYYRAP 195
Query: 508 EYYRNFQLTDKSDVYSFGVVLLELLTSK 535
E + D++S G ++ E++ K
Sbjct: 196 EVILGMGYKENVDIWSVGCIMGEMVRHK 223
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/208 (24%), Positives = 85/208 (40%), Gaps = 27/208 (12%)
Query: 338 IGTGGFGEV---FKGILDDGTVTAIKRAKLGNTKGTDLVLNEVRILCQVNHRSLVRLLGC 394
IG+G G V + +LD N E+ ++ VNH++++ LL
Sbjct: 26 IGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNV 85
Query: 395 CV------ELDQTLMIYEYIPNGTLFDHLHCDFTGKWPPLPWHLRL-VIAHQIAEGLTYL 447
E ++ E + + L + + H R+ + +Q+ G+ +L
Sbjct: 86 FTPQKTLEEFQDVYLVMELM-DANLCQVIQMELD--------HERMSYLLYQMLCGIKHL 136
Query: 448 HSAAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDSHIFTTAQGTMGYLDP 507
HSA I HRD+K SNI++ K+ DFGL+R S + T T Y P
Sbjct: 137 HSAG---IIHRDLKPSNIVVKSDCTLKILDFGLAR-----TAGTSFMMTPYVVTRYYRAP 188
Query: 508 EYYRNFQLTDKSDVYSFGVVLLELLTSK 535
E + D++S G ++ E++ K
Sbjct: 189 EVILGMGYKENVDIWSVGCIMGEMVRHK 216
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/209 (20%), Positives = 87/209 (41%), Gaps = 16/209 (7%)
Query: 330 NNFSKDNLIGTGGFGEVFKG----ILDDGTVTAIKRAKLGNTKGTDLVLNEVRILCQVNH 385
+F ++G G F V + + +++ + V E ++ +++H
Sbjct: 14 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 73
Query: 386 RSLVRLLGCCVELDQTLMIYEYIPNGTLFDHLHCDFTGKWPPLPWHLRLVIAHQIAEGLT 445
V+L + ++ Y NG L ++ K +I L
Sbjct: 74 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIR-----KIGSFDETCTRFYTAEIVSALE 128
Query: 446 YLHSAAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVE-RTETNDSHIFTTAQGTMGY 504
YLH I HRD+K NILL+E ++ +++DFG ++++ ++ ++ F GT Y
Sbjct: 129 YLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFV---GTAQY 182
Query: 505 LDPEYYRNFQLTDKSDVYSFGVVLLELLT 533
+ PE SD+++ G ++ +L+
Sbjct: 183 VSPELLTEKSACKSSDLWALGCIIYQLVA 211
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/224 (24%), Positives = 102/224 (45%), Gaps = 19/224 (8%)
Query: 332 FSKDNLIGTGGFGEVFKGI--LDDGTVTAIKRAKLGNTKGTD-LVLNEVRILCQVNHRSL 388
+ K + +G G + V+KG L D V A+K +L + +G + EV +L + H ++
Sbjct: 4 YIKLDKLGEGTYATVYKGKSKLTDNLV-ALKEIRLEHEEGAPCTAIREVSLLKDLKHANI 62
Query: 389 VRLLGCCVELDQTLMIYEYIPNGTLFDHLHCDFTGKWPPLPWHLRLVIAHQIAEGLTYLH 448
V L +++EY+ + D G + H + Q+ GL Y H
Sbjct: 63 VTLHDIIHTEKSLTLVFEYLDKDL---KQYLDDCGNI--INMHNVKLFLFQLLRGLAYCH 117
Query: 449 SAAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVE-RTETNDSHIFTTAQGTMGYLDP 507
V HRD+K N+L++E+ K++DFGL+R T+T D+ + T+ Y P
Sbjct: 118 RQKV---LHRDLKPQNLLINERGELKLADFGLARAKSIPTKTYDNEVV-----TLWYRPP 169
Query: 508 E-YYRNFQLTDKSDVYSFGVVLLELLTSKKAIDFNREEENVNLV 550
+ + + + D++ G + E+ T + + EE ++ +
Sbjct: 170 DILLGSTDYSTQIDMWGVGCIFYEMATGRPLFPGSTVEEQLHFI 213
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/213 (23%), Positives = 91/213 (42%), Gaps = 16/213 (7%)
Query: 327 RATNNFSKDNLIGTGGFGEVFKGI-LDDGTVTA---IKRAKLGNTKGTDLVLNEVRILCQ 382
R + + +G GGF + ++ +D V A + ++ L + + E+ I
Sbjct: 23 RTMKRYMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKS 82
Query: 383 VNHRSLVRLLGCCVELDQTLMIYEYIPNGTLFDHLHCDFTGKWPPLPWHLRLVIAHQIAE 442
+++ +V G + D ++ E +L + P + +R Q +
Sbjct: 83 LDNPHVVGFHGFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARYFMR-----QTIQ 137
Query: 443 GLTYLHSAAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDSHIFTTAQGTM 502
G+ YLH+ V HRD+K N+ L++ ++ K+ DFGL+ +E D GT
Sbjct: 138 GVQYLHNNRV---IHRDLKLGNLFLNDDMDVKIGDFGLATKIE----FDGERKKDLCGTP 190
Query: 503 GYLDPEYYRNFQLTDKSDVYSFGVVLLELLTSK 535
Y+ PE + + D++S G +L LL K
Sbjct: 191 NYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGK 223
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/215 (23%), Positives = 94/215 (43%), Gaps = 20/215 (9%)
Query: 330 NNFSKDNLIGTGGFGEVFKGI-LDDGTVTAIKRAKLGNTKG--TDLVLNEVRILCQVNHR 386
+ K IG G +G VFK + + A+KR +L + L E+ +L ++ H+
Sbjct: 2 QKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHK 61
Query: 387 SLVRLLGCCVELDQTLMIYEYIPNG--TLFDHLHCDFTGKWPPLPWHLRLVIAHQIAEGL 444
++VRL + +++E+ FD + D L + Q+ +GL
Sbjct: 62 NIVRLHDVLHSDKKLTLVFEFCDQDLKKYFDSCNGD-------LDPEIVKSFLFQLLKGL 114
Query: 445 TYLHSAAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDSHIFTTAQGTMGY 504
+ HS V HRD+K N+L++ K+++FGL+R ++ T+ Y
Sbjct: 115 GFCHSRNV---LHRDLKPQNLLINRNGELKLANFGLARAFGIP----VRCYSAEVVTLWY 167
Query: 505 LDPEYYRNFQLTDKS-DVYSFGVVLLELLTSKKAI 538
P+ +L S D++S G + EL + + +
Sbjct: 168 RPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPL 202
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 90/202 (44%), Gaps = 18/202 (8%)
Query: 338 IGTGGFGEVFK-GILDDGTVTAIKRAKLG-NTKGTDLVLNEVRI-LCQVNHRSLVRLLGC 394
+G G +G V K + G + A+KR + N++ +L ++ I + V+ V G
Sbjct: 59 LGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGA 118
Query: 395 CVELDQTLMIYEYIPNGTLFDHLHCDFTGKWPPLPWHLRLVIAHQIAEGLTYLHSAAVPP 454
+ E + T D + K +P + IA I + L +LHS
Sbjct: 119 LFREGDVWICMELM--DTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKL--S 174
Query: 455 IYHRDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDSHIFTTAQGTMGYLDPEYYRNFQ 514
+ HRDVK SN+L++ K+ DFG+S + DS T G Y+ PE N +
Sbjct: 175 VIHRDVKPSNVLINALGQVKMCDFGISGYL-----VDSVAKTIDAGCKPYMAPERI-NPE 228
Query: 515 LTD-----KSDVYSFGVVLLEL 531
L KSD++S G+ ++EL
Sbjct: 229 LNQKGYSVKSDIWSLGITMIEL 250
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/208 (25%), Positives = 95/208 (45%), Gaps = 31/208 (14%)
Query: 338 IGTGGFGEVFKGILDDGT-------VTAIKRAKLGNTKGTDLVLN---EVRILCQVNHRS 387
+G+G GEV K + T + + ++ +G+ + D LN E+ IL ++NH
Sbjct: 18 LGSGACGEV-KLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPC 76
Query: 388 LVRLLGCCVELDQTLMIYEYIPNGTLFDHLHCDFTGKWPPLPWHLRLVIAHQIAEGLTYL 447
++++ + + ++ E + G LFD + + K + +Q+ + YL
Sbjct: 77 IIKIKNF-FDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYF-----YQMLLAVQYL 130
Query: 448 HSAAVPPIYHRDVKSSNILL---DEKLNAKVSDFGLSRLVERTETNDSHIFTTAQGTMGY 504
H I HRD+K N+LL +E K++DFG S+++ ++ + T GT Y
Sbjct: 131 HENG---IIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL-----GETSLMRTLCGTPTY 182
Query: 505 LDPEYYRNFQLTDKS---DVYSFGVVLL 529
L PE + + D +S GV+L
Sbjct: 183 LAPEVLVSVGTAGYNRAVDCWSLGVILF 210
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/208 (25%), Positives = 95/208 (45%), Gaps = 31/208 (14%)
Query: 338 IGTGGFGEVFKGILDDGT-------VTAIKRAKLGNTKGTDLVLN---EVRILCQVNHRS 387
+G+G GEV K + T + + ++ +G+ + D LN E+ IL ++NH
Sbjct: 18 LGSGACGEV-KLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPC 76
Query: 388 LVRLLGCCVELDQTLMIYEYIPNGTLFDHLHCDFTGKWPPLPWHLRLVIAHQIAEGLTYL 447
++++ + + ++ E + G LFD + + K + +Q+ + YL
Sbjct: 77 IIKIKNF-FDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYF-----YQMLLAVQYL 130
Query: 448 HSAAVPPIYHRDVKSSNILL---DEKLNAKVSDFGLSRLVERTETNDSHIFTTAQGTMGY 504
H I HRD+K N+LL +E K++DFG S+++ ++ + T GT Y
Sbjct: 131 HENG---IIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL-----GETSLMRTLCGTPTY 182
Query: 505 LDPEYYRNFQLTDKS---DVYSFGVVLL 529
L PE + + D +S GV+L
Sbjct: 183 LAPEVLVSVGTAGYNRAVDCWSLGVILF 210
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/209 (20%), Positives = 87/209 (41%), Gaps = 16/209 (7%)
Query: 330 NNFSKDNLIGTGGFGEVFKG----ILDDGTVTAIKRAKLGNTKGTDLVLNEVRILCQVNH 385
+F ++G G F V + + +++ + V E ++ +++H
Sbjct: 29 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 88
Query: 386 RSLVRLLGCCVELDQTLMIYEYIPNGTLFDHLHCDFTGKWPPLPWHLRLVIAHQIAEGLT 445
V+L + ++ Y NG L ++ K +I L
Sbjct: 89 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIR-----KIGSFDETCTRFYTAEIVSALE 143
Query: 446 YLHSAAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVE-RTETNDSHIFTTAQGTMGY 504
YLH I HRD+K NILL+E ++ +++DFG ++++ ++ ++ F GT Y
Sbjct: 144 YLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFV---GTAQY 197
Query: 505 LDPEYYRNFQLTDKSDVYSFGVVLLELLT 533
+ PE SD+++ G ++ +L+
Sbjct: 198 VSPELLTEKSACKSSDLWALGCIIYQLVA 226
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/208 (25%), Positives = 95/208 (45%), Gaps = 31/208 (14%)
Query: 338 IGTGGFGEVFKGILDDGT-------VTAIKRAKLGNTKGTDLVLN---EVRILCQVNHRS 387
+G+G GEV K + T + + ++ +G+ + D LN E+ IL ++NH
Sbjct: 18 LGSGACGEV-KLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPC 76
Query: 388 LVRLLGCCVELDQTLMIYEYIPNGTLFDHLHCDFTGKWPPLPWHLRLVIAHQIAEGLTYL 447
++++ + + ++ E + G LFD + + K + +Q+ + YL
Sbjct: 77 IIKIKNF-FDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYF-----YQMLLAVQYL 130
Query: 448 HSAAVPPIYHRDVKSSNILL---DEKLNAKVSDFGLSRLVERTETNDSHIFTTAQGTMGY 504
H I HRD+K N+LL +E K++DFG S+++ ++ + T GT Y
Sbjct: 131 HENG---IIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL-----GETSLMRTLCGTPTY 182
Query: 505 LDPEYYRNFQLTDKS---DVYSFGVVLL 529
L PE + + D +S GV+L
Sbjct: 183 LAPEVLVSVGTAGYNRAVDCWSLGVILF 210
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/208 (25%), Positives = 95/208 (45%), Gaps = 31/208 (14%)
Query: 338 IGTGGFGEVFKGILDDGT-------VTAIKRAKLGNTKGTDLVLN---EVRILCQVNHRS 387
+G+G GEV K + T + + ++ +G+ + D LN E+ IL ++NH
Sbjct: 17 LGSGACGEV-KLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPC 75
Query: 388 LVRLLGCCVELDQTLMIYEYIPNGTLFDHLHCDFTGKWPPLPWHLRLVIAHQIAEGLTYL 447
++++ + + ++ E + G LFD + + K + +Q+ + YL
Sbjct: 76 IIKIKNF-FDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYF-----YQMLLAVQYL 129
Query: 448 HSAAVPPIYHRDVKSSNILL---DEKLNAKVSDFGLSRLVERTETNDSHIFTTAQGTMGY 504
H I HRD+K N+LL +E K++DFG S+++ ++ + T GT Y
Sbjct: 130 HENG---IIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL-----GETSLMRTLCGTPTY 181
Query: 505 LDPEYYRNFQLTDKS---DVYSFGVVLL 529
L PE + + D +S GV+L
Sbjct: 182 LAPEVLVSVGTAGYNRAVDCWSLGVILF 209
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 93/216 (43%), Gaps = 37/216 (17%)
Query: 338 IGTGGFGEVFKGILD-DGTVTAIKRAK--LGNTKGTDLVLNEVRILCQVNHRSLVRLLGC 394
IG G +G V K + G + A+KR + + + L+++ ++ + +V+ G
Sbjct: 30 IGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEKEQKQLLMDLDVVMRSSDCPYIVQFYGA 89
Query: 395 ---------CVELDQTLM--IYEYIPNGTLFDHLHCDFTGKWPPLPWHLRLVIAHQIAEG 443
C+EL T Y+Y+ L D + + GK I +
Sbjct: 90 LFREGDCWICMELMSTSFDKFYKYV-YSVLDDVIPEEILGK-----------ITLATVKA 137
Query: 444 LTYLHSAAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDSHIFTTAQGTMG 503
L +L I HRD+K SNILLD N K+ DFG+S + DS T G
Sbjct: 138 LNHLKENL--KIIHRDIKPSNILLDRSGNIKLCDFGIS-----GQLVDSIAKTRDAGCRP 190
Query: 504 YLDPEYY---RNFQLTD-KSDVYSFGVVLLELLTSK 535
Y+ PE + Q D +SDV+S G+ L EL T +
Sbjct: 191 YMAPERIDPSASRQGYDVRSDVWSLGITLYELATGR 226
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/208 (25%), Positives = 95/208 (45%), Gaps = 31/208 (14%)
Query: 338 IGTGGFGEVFKGILDDGT-------VTAIKRAKLGNTKGTDLVLN---EVRILCQVNHRS 387
+G+G GEV K + T + + ++ +G+ + D LN E+ IL ++NH
Sbjct: 24 LGSGACGEV-KLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPC 82
Query: 388 LVRLLGCCVELDQTLMIYEYIPNGTLFDHLHCDFTGKWPPLPWHLRLVIAHQIAEGLTYL 447
++++ + + ++ E + G LFD + + K + +Q+ + YL
Sbjct: 83 IIKIKNF-FDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYF-----YQMLLAVQYL 136
Query: 448 HSAAVPPIYHRDVKSSNILL---DEKLNAKVSDFGLSRLVERTETNDSHIFTTAQGTMGY 504
H I HRD+K N+LL +E K++DFG S+++ ++ + T GT Y
Sbjct: 137 HENG---IIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL-----GETSLMRTLCGTPTY 188
Query: 505 LDPEYYRNFQLTDKS---DVYSFGVVLL 529
L PE + + D +S GV+L
Sbjct: 189 LAPEVLVSVGTAGYNRAVDCWSLGVILF 216
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/210 (20%), Positives = 86/210 (40%), Gaps = 18/210 (8%)
Query: 330 NNFSKDNLIGTGGFGEVFKG----ILDDGTVTAIKRAKLGNTKGTDLVLNEVRILCQVNH 385
+F ++G G F V + + +++ + V E ++ +++H
Sbjct: 29 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 88
Query: 386 RSLVRLLGCCVELDQTLMIYEYIPNGTLFDHLHCDFTGKWPPLPWHLRLVIAHQIAEGLT 445
V+L + ++ Y NG L ++ K +I L
Sbjct: 89 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIR-----KIGSFDETCTRFYTAEIVSALE 143
Query: 446 YLHSAAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLV--ERTETNDSHIFTTAQGTMG 503
YLH I HRD+K NILL+E ++ +++DFG ++++ E + + TAQ
Sbjct: 144 YLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQ---- 196
Query: 504 YLDPEYYRNFQLTDKSDVYSFGVVLLELLT 533
Y+ PE SD+++ G ++ +L+
Sbjct: 197 YVSPELLTEKSACKSSDLWALGCIIYQLVA 226
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/151 (26%), Positives = 68/151 (45%), Gaps = 18/151 (11%)
Query: 338 IGTGGFGEVFKGILDDGTVTAIKRAKLGNTKGT--DLVLNEVRILCQVNHRSLVRLLGCC 395
IG G +G V+K + G A+K+ +L + E+ IL ++ H ++V+L
Sbjct: 10 IGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVI 69
Query: 396 VELDQTLMIYEYIPNGTLFDHLHCDFTGKWPPLPWHLRLVIAH----QIAEGLTYLHSAA 451
+ +++ F+HL D L V A Q+ G+ Y H
Sbjct: 70 HTKKRLVLV---------FEHLDQDLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDRR 120
Query: 452 VPPIYHRDVKSSNILLDEKLNAKVSDFGLSR 482
V HRD+K N+L++ + K++DFGL+R
Sbjct: 121 V---LHRDLKPQNLLINREGELKIADFGLAR 148
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 50/204 (24%), Positives = 85/204 (41%), Gaps = 25/204 (12%)
Query: 338 IGTGGFGEV---FKGILDDGTVTAIKRAKLGNTKGTDLVLNEVRILCQVNHRSLVRLLGC 394
IG+G G V + IL+ N E+ ++ VNH++++ LL
Sbjct: 32 IGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKVVNHKNIIGLLNV 91
Query: 395 -----CVELDQTLMIYEYIPNGTLFDHLHCDFTGKWPPLPWHLRL-VIAHQIAEGLTYLH 448
+E Q + I + + L + + H R+ + +Q+ G+ +LH
Sbjct: 92 FTPQKSLEEFQDVYIVMELMDANLSQVIQMELD--------HERMSYLLYQMLCGIKHLH 143
Query: 449 SAAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDSHIFTTAQGTMGYLDPE 508
SA I HRD+K SNI++ K+ DFGL+R S + T T Y PE
Sbjct: 144 SAG---IIHRDLKPSNIVVKSDATLKILDFGLAR-----TAGTSFMMTPYVVTRYYRAPE 195
Query: 509 YYRNFQLTDKSDVYSFGVVLLELL 532
+ D++S G ++ E++
Sbjct: 196 VILGMGYKENVDIWSVGCIMGEMI 219
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 40/151 (26%), Positives = 68/151 (45%), Gaps = 18/151 (11%)
Query: 338 IGTGGFGEVFKGILDDGTVTAIKRAKLGNTKGT--DLVLNEVRILCQVNHRSLVRLLGCC 395
IG G +G V+K + G A+K+ +L + E+ IL ++ H ++V+L
Sbjct: 10 IGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVI 69
Query: 396 VELDQTLMIYEYIPNGTLFDHLHCDFTGKWPPLPWHLRLVIAH----QIAEGLTYLHSAA 451
+ +++ F+HL D L V A Q+ G+ Y H
Sbjct: 70 HTKKRLVLV---------FEHLDQDLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDRR 120
Query: 452 VPPIYHRDVKSSNILLDEKLNAKVSDFGLSR 482
V HRD+K N+L++ + K++DFGL+R
Sbjct: 121 V---LHRDLKPQNLLINREGELKIADFGLAR 148
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 50/204 (24%), Positives = 85/204 (41%), Gaps = 25/204 (12%)
Query: 338 IGTGGFGEV---FKGILDDGTVTAIKRAKLGNTKGTDLVLNEVRILCQVNHRSLVRLLGC 394
IG+G G V + IL+ N E+ ++ VNH++++ LL
Sbjct: 32 IGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNV 91
Query: 395 -----CVELDQTLMIYEYIPNGTLFDHLHCDFTGKWPPLPWHLRL-VIAHQIAEGLTYLH 448
+E Q + I + + L + + H R+ + +Q+ G+ +LH
Sbjct: 92 FTPQKSLEEFQDVYIVMELMDANLCQVIQMELD--------HERMSYLLYQMLCGIKHLH 143
Query: 449 SAAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDSHIFTTAQGTMGYLDPE 508
SA I HRD+K SNI++ K+ DFGL+R S + T T Y PE
Sbjct: 144 SAG---IIHRDLKPSNIVVKSDCTLKILDFGLAR-----TAGTSFMMTPEVVTRYYRAPE 195
Query: 509 YYRNFQLTDKSDVYSFGVVLLELL 532
+ D++S G ++ E++
Sbjct: 196 VILGMGYKENVDIWSVGCIMGEMI 219
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 40/151 (26%), Positives = 68/151 (45%), Gaps = 18/151 (11%)
Query: 338 IGTGGFGEVFKGILDDGTVTAIKRAKLGNTKGT--DLVLNEVRILCQVNHRSLVRLLGCC 395
IG G +G V+K + G A+K+ +L + E+ IL ++ H ++V+L
Sbjct: 10 IGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVI 69
Query: 396 VELDQTLMIYEYIPNGTLFDHLHCDFTGKWPPLPWHLRLVIAH----QIAEGLTYLHSAA 451
+ +++ F+HL D L V A Q+ G+ Y H
Sbjct: 70 HTKKRLVLV---------FEHLDQDLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDRR 120
Query: 452 VPPIYHRDVKSSNILLDEKLNAKVSDFGLSR 482
V HRD+K N+L++ + K++DFGL+R
Sbjct: 121 V---LHRDLKPQNLLINREGELKIADFGLAR 148
>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine
Inhibitor
Length = 369
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 86/207 (41%), Gaps = 25/207 (12%)
Query: 338 IGTGGFGEV---FKGILDDGTVTAIKRAKLGNTKGTDLVLNEVRILCQVNHRSLVRLLGC 394
IG+G G V + IL+ N E+ ++ VNH++++ LL
Sbjct: 37 IGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNV 96
Query: 395 -----CVELDQTLMIYEYIPNGTLFDHLHCDFTGKWPPLPWHLRL-VIAHQIAEGLTYLH 448
+E Q + I + + L + + H R+ + +Q+ G+ +LH
Sbjct: 97 FTPQKSLEEFQDVYIVMELMDANLCQVIQMELD--------HERMSYLLYQMLCGIKHLH 148
Query: 449 SAAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDSHIFTTAQGTMGYLDPE 508
SA I HRD+K SNI++ K+ DFGL+R S + T T Y PE
Sbjct: 149 SAG---IIHRDLKPSNIVVKSDCTLKILDFGLAR-----TAGTSFMMTPYVVTRYYRAPE 200
Query: 509 YYRNFQLTDKSDVYSFGVVLLELLTSK 535
+ D++S G ++ E++ K
Sbjct: 201 VILGMGYKENVDLWSVGCIMGEMVCHK 227
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 52/208 (25%), Positives = 95/208 (45%), Gaps = 31/208 (14%)
Query: 338 IGTGGFGEVFKGILDDGT-------VTAIKRAKLGNTKGTDLVLN---EVRILCQVNHRS 387
+G+G GEV K + T + + ++ +G+ + D LN E+ IL ++NH
Sbjct: 143 LGSGACGEV-KLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNHPC 201
Query: 388 LVRLLGCCVELDQTLMIYEYIPNGTLFDHLHCDFTGKWPPLPWHLRLVIAHQIAEGLTYL 447
++++ + + ++ E + G LFD + + K + +Q+ + YL
Sbjct: 202 IIKIKNF-FDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYF-----YQMLLAVQYL 255
Query: 448 HSAAVPPIYHRDVKSSNILL---DEKLNAKVSDFGLSRLVERTETNDSHIFTTAQGTMGY 504
H I HRD+K N+LL +E K++DFG S+++ ++ + T GT Y
Sbjct: 256 HENG---IIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL-----GETSLMRTLCGTPTY 307
Query: 505 LDPEYYRNFQLTDKS---DVYSFGVVLL 529
L PE + + D +S GV+L
Sbjct: 308 LAPEVLVSVGTAGYNRAVDCWSLGVILF 335
>pdb|2RIO|A Chain A, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
pdb|2RIO|B Chain B, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
Length = 434
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 76/313 (24%), Positives = 132/313 (42%), Gaps = 51/313 (16%)
Query: 335 DNLIGTGGFGEV-FKGILDDGTVTAIKRAKLGNTKGTDLVLNEVRILCQVN-HRSLVRLL 392
+ ++G G G V F+G G A+KR + D+ L E+++L + + H +++R
Sbjct: 20 EKILGYGSSGTVVFQGSFQ-GRPVAVKRMLID---FCDIALMEIKLLTESDDHPNVIRYY 75
Query: 393 GCCVELDQTLMIYEYIPNGTLFDHL--------HCDFTGKWPPLPWHLRLVIAHQIAEGL 444
C D+ L I + N L D + + ++ P+ + QIA G+
Sbjct: 76 -CSETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPIS------LLRQIASGV 128
Query: 445 TYLHSAAVPPIYHRDVKSSNILLD-------------EKLNAKVSDFGLSRLVERTETND 491
+LHS I HRD+K NIL+ E L +SDFGL + ++ +++
Sbjct: 129 AHLHSLK---IIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQSSF 185
Query: 492 SHIFTTAQGTMGYLDPEYYR---NFQ----LTDKSDVYSFGVVLLELLTSKKAI--DFNR 542
GT G+ PE N Q LT D++S G V +L+ K D
Sbjct: 186 RTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYS 245
Query: 543 EEENVNLVVY----MKKIMDEERLMEVVDPVLKERATHLDLETMKALGLLAASCLDERRQ 598
E N+ ++ MK + D + E D ++ + H L+ A+ +L + +
Sbjct: 246 RESNIIRGIFSLDEMKCLHDRSLIAEATD-LISQMIDHDPLKRPTAMKVLRHPLFWPKSK 304
Query: 599 NRPSMKEVADEIE 611
+ +V+D +E
Sbjct: 305 KLEFLLKVSDRLE 317
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 50/204 (24%), Positives = 85/204 (41%), Gaps = 25/204 (12%)
Query: 338 IGTGGFGEV---FKGILDDGTVTAIKRAKLGNTKGTDLVLNEVRILCQVNHRSLVRLLGC 394
IG+G G V + IL+ N E+ ++ VNH++++ LL
Sbjct: 33 IGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNV 92
Query: 395 -----CVELDQTLMIYEYIPNGTLFDHLHCDFTGKWPPLPWHLRL-VIAHQIAEGLTYLH 448
+E Q + I + + L + + H R+ + +Q+ G+ +LH
Sbjct: 93 FTPQKSLEEFQDVYIVMELMDANLCQVIQMELD--------HERMSYLLYQMLCGIKHLH 144
Query: 449 SAAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDSHIFTTAQGTMGYLDPE 508
SA I HRD+K SNI++ K+ DFGL+R S + T T Y PE
Sbjct: 145 SAG---IIHRDLKPSNIVVKSDCTLKILDFGLAR-----TAGTSFMMTPYVVTRYYRAPE 196
Query: 509 YYRNFQLTDKSDVYSFGVVLLELL 532
+ D++S G ++ E++
Sbjct: 197 VILGMGYKENVDIWSVGCIMGEMI 220
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 45/162 (27%), Positives = 72/162 (44%), Gaps = 17/162 (10%)
Query: 376 EVRILCQVNHRSLVRLLGCCVELDQTLMIYEYIPNGTLFDHLHCDFTGKWPPLPWHLRLV 435
EV IL ++ H +++ L ++I E + G LF DF + L
Sbjct: 64 EVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELF-----DFLAEKESLTEEEATE 118
Query: 436 IAHQIAEGLTYLHSAAVPPIYHRDVKSSNILLDE----KLNAKVSDFGLSRLVERTETND 491
QI G+ YLHS + H D+K NI+L + K K+ DFGL+ ++
Sbjct: 119 FLKQILNGVYYLHSLQIA---HFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDF----- 170
Query: 492 SHIFTTAQGTMGYLDPEYYRNFQLTDKSDVYSFGVVLLELLT 533
+ F GT ++ PE L ++D++S GV+ LL+
Sbjct: 171 GNEFKNIFGTPAFVAPEIVNYEPLGLEADMWSIGVITYILLS 212
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 89/206 (43%), Gaps = 29/206 (14%)
Query: 338 IGTGGFGEV---FKGILDDGTVTAIKRAK--LGNTKGTDLVLNEVRILCQVNHRSLVRLL 392
IG+G G V F +L G A+K+ N E+ +L VNH++++ LL
Sbjct: 32 IGSGAQGIVCAAFDTVL--GINVAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKNIISLL 89
Query: 393 GC-----CVELDQTLMIYEYIPNGTLFDHLHCDFTGKWPPLPWHLRL-VIAHQIAEGLTY 446
+E Q + + + + L +H + H R+ + +Q+ G+ +
Sbjct: 90 NVFTPQKTLEEFQDVYLVMELMDANLCQVIHMELD--------HERMSYLLYQMLCGIKH 141
Query: 447 LHSAAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDSHIFTTAQGTMGYLD 506
LHSA I HRD+K SNI++ K+ DFGL+R + + T T Y
Sbjct: 142 LHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLAR-----TACTNFMMTPYVVTRYYRA 193
Query: 507 PEYYRNFQLTDKSDVYSFGVVLLELL 532
PE D++S G ++ EL+
Sbjct: 194 PEVILGMGYAANVDIWSVGCIMGELV 219
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 50/204 (24%), Positives = 85/204 (41%), Gaps = 25/204 (12%)
Query: 338 IGTGGFGEV---FKGILDDGTVTAIKRAKLGNTKGTDLVLNEVRILCQVNHRSLVRLLGC 394
IG+G G V + IL+ N E+ ++ VNH++++ LL
Sbjct: 32 IGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNV 91
Query: 395 -----CVELDQTLMIYEYIPNGTLFDHLHCDFTGKWPPLPWHLRL-VIAHQIAEGLTYLH 448
+E Q + I + + L + + H R+ + +Q+ G+ +LH
Sbjct: 92 FTPQKSLEEFQDVYIVMELMDANLSQVIQMELD--------HERMSYLLYQMLCGIKHLH 143
Query: 449 SAAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDSHIFTTAQGTMGYLDPE 508
SA I HRD+K SNI++ K+ DFGL+R S + T T Y PE
Sbjct: 144 SAG---IIHRDLKPSNIVVKSDATLKILDFGLAR-----TAGTSFMMTPYVVTRYYRAPE 195
Query: 509 YYRNFQLTDKSDVYSFGVVLLELL 532
+ D++S G ++ E++
Sbjct: 196 VILGMGYKENVDIWSVGCIMGEMI 219
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 51/107 (47%), Gaps = 23/107 (21%)
Query: 436 IAHQIAEGLTYLHSAAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDSHIF 495
+ +Q+ +GL Y+HSA V HRD+K N+ ++E K+ DFGL+R + T
Sbjct: 149 LVYQMLKGLKYIHSAGV---VHRDLKPGNLAVNEDCELKILDFGLARHADAEMT------ 199
Query: 496 TTAQGTMGYLDPEYYRN-------FQLTDKSDVYSFGVVLLELLTSK 535
GY+ +YR D++S G ++ E+LT K
Sbjct: 200 -------GYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGK 239
>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor
Length = 358
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 86/207 (41%), Gaps = 25/207 (12%)
Query: 338 IGTGGFGEV---FKGILDDGTVTAIKRAKLGNTKGTDLVLNEVRILCQVNHRSLVRLLGC 394
IG+G G V + IL+ N E+ ++ VNH++++ LL
Sbjct: 26 IGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNV 85
Query: 395 -----CVELDQTLMIYEYIPNGTLFDHLHCDFTGKWPPLPWHLRL-VIAHQIAEGLTYLH 448
+E Q + I + + L + + H R+ + +Q+ G+ +LH
Sbjct: 86 FTPQKSLEEFQDVYIVMELMDANLCQVIQMELD--------HERMSYLLYQMLCGIKHLH 137
Query: 449 SAAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDSHIFTTAQGTMGYLDPE 508
SA I HRD+K SNI++ K+ DFGL+R S + T T Y PE
Sbjct: 138 SAG---IIHRDLKPSNIVVKSDCTLKILDFGLAR-----TAGTSFMMTPYVVTRYYRAPE 189
Query: 509 YYRNFQLTDKSDVYSFGVVLLELLTSK 535
+ D++S G ++ E++ K
Sbjct: 190 VILGMGYKENVDLWSVGCIMGEMVCHK 216
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 50/204 (24%), Positives = 85/204 (41%), Gaps = 25/204 (12%)
Query: 338 IGTGGFGEV---FKGILDDGTVTAIKRAKLGNTKGTDLVLNEVRILCQVNHRSLVRLLGC 394
IG+G G V + IL+ N E+ ++ VNH++++ LL
Sbjct: 32 IGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNV 91
Query: 395 -----CVELDQTLMIYEYIPNGTLFDHLHCDFTGKWPPLPWHLRL-VIAHQIAEGLTYLH 448
+E Q + I + + L + + H R+ + +Q+ G+ +LH
Sbjct: 92 FTPQKSLEEFQDVYIVMELMDANLCQVIQMELD--------HERMSYLLYQMLCGIKHLH 143
Query: 449 SAAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDSHIFTTAQGTMGYLDPE 508
SA I HRD+K SNI++ K+ DFGL+R S + T T Y PE
Sbjct: 144 SAG---IIHRDLKPSNIVVKSDCTLKILDFGLAR-----TAGTSFMMTPYVVTRYYRAPE 195
Query: 509 YYRNFQLTDKSDVYSFGVVLLELL 532
+ D++S G ++ E++
Sbjct: 196 VILGMGYKENVDIWSVGCIMGEMI 219
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 50/204 (24%), Positives = 85/204 (41%), Gaps = 25/204 (12%)
Query: 338 IGTGGFGEV---FKGILDDGTVTAIKRAKLGNTKGTDLVLNEVRILCQVNHRSLVRLLGC 394
IG+G G V + IL+ N E+ ++ VNH++++ LL
Sbjct: 32 IGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNV 91
Query: 395 -----CVELDQTLMIYEYIPNGTLFDHLHCDFTGKWPPLPWHLRL-VIAHQIAEGLTYLH 448
+E Q + I + + L + + H R+ + +Q+ G+ +LH
Sbjct: 92 FTPQKSLEEFQDVYIVMELMDANLSQVIQMELD--------HERMSYLLYQMLCGIKHLH 143
Query: 449 SAAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDSHIFTTAQGTMGYLDPE 508
SA I HRD+K SNI++ K+ DFGL+R S + T T Y PE
Sbjct: 144 SAG---IIHRDLKPSNIVVKSDCTLKILDFGLAR-----TAGTSFMMTPYVVTRYYRAPE 195
Query: 509 YYRNFQLTDKSDVYSFGVVLLELL 532
+ D++S G ++ E++
Sbjct: 196 VILGMGYKENVDIWSVGCIMGEMI 219
>pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6
pdb|3UDB|B Chain B, Crystal Structure Of Snrk2.6
pdb|3UDB|C Chain C, Crystal Structure Of Snrk2.6
pdb|3UDB|D Chain D, Crystal Structure Of Snrk2.6
pdb|3UDB|E Chain E, Crystal Structure Of Snrk2.6
pdb|3UDB|F Chain F, Crystal Structure Of Snrk2.6
Length = 317
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 66/231 (28%), Positives = 99/231 (42%), Gaps = 32/231 (13%)
Query: 338 IGTGGFGEVFKGILDD--GTVTAIKRAKLGNTKGTDLVLNEVRILCQVNHRSL-----VR 390
IG G FG V + + D + A+K + G K + V E+ +NHRSL VR
Sbjct: 27 IGAGNFG-VARLMRDKQANELVAVKYIERGE-KIDENVKREI-----INHRSLRHPNIVR 79
Query: 391 LLGCCVELDQTLMIYEYIPNGTLFDHLHCDFTGKWPPLPWHLRLVIAHQIAEGLTYLHSA 450
+ ++ EY G LF+ + C+ G++ Q+ G++Y H+
Sbjct: 80 FKEVILTPTHLAIVMEYASGGELFERI-CN-AGRFSEDEARFFF---QQLISGVSYAHAM 134
Query: 451 AVPPIYHRDVKSSNILLD--EKLNAKVSDFGLSRLVERTETNDSHIFTTAQGTMGYLDPE 508
V HRD+K N LLD K++DFG S+ S A GT Y+ PE
Sbjct: 135 QVA---HRDLKLENTLLDGSPAPRLKIADFGYSKASVLHSQPKS-----AVGTPAYIAPE 186
Query: 509 YYRNFQLTDK-SDVYSFGVVLLELLTSKKAIDFNREEENVNLVVYMKKIMD 558
+ K +DV+S GV L +L A F EE N + +I++
Sbjct: 187 VLLKKEYDGKVADVWSCGVTLYVMLVG--AYPFEDPEEPKNFRKTIHRILN 235
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 50/204 (24%), Positives = 85/204 (41%), Gaps = 25/204 (12%)
Query: 338 IGTGGFGEV---FKGILDDGTVTAIKRAKLGNTKGTDLVLNEVRILCQVNHRSLVRLLGC 394
IG+G G V + IL+ N E+ ++ VNH++++ LL
Sbjct: 32 IGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNV 91
Query: 395 -----CVELDQTLMIYEYIPNGTLFDHLHCDFTGKWPPLPWHLRL-VIAHQIAEGLTYLH 448
+E Q + I + + L + + H R+ + +Q+ G+ +LH
Sbjct: 92 FTPQKSLEEFQDVYIVMELMDANLCQVIQMELD--------HERMSYLLYQMLCGIKHLH 143
Query: 449 SAAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDSHIFTTAQGTMGYLDPE 508
SA I HRD+K SNI++ K+ DFGL+R S + T T Y PE
Sbjct: 144 SAG---IIHRDLKPSNIVVKSDCTLKILDFGLAR-----TAGTSFMMTPYVVTRYYRAPE 195
Query: 509 YYRNFQLTDKSDVYSFGVVLLELL 532
+ D++S G ++ E++
Sbjct: 196 VILGMGYKENVDIWSVGCIMGEMI 219
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 52/208 (25%), Positives = 95/208 (45%), Gaps = 31/208 (14%)
Query: 338 IGTGGFGEVFKGILDDGT-------VTAIKRAKLGNTKGTDLVLN---EVRILCQVNHRS 387
+G+G GEV K + T + + ++ +G+ + D LN E+ IL ++NH
Sbjct: 157 LGSGACGEV-KLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNHPC 215
Query: 388 LVRLLGCCVELDQTLMIYEYIPNGTLFDHLHCDFTGKWPPLPWHLRLVIAHQIAEGLTYL 447
++++ + + ++ E + G LFD + + K + +Q+ + YL
Sbjct: 216 IIKIKNF-FDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYF-----YQMLLAVQYL 269
Query: 448 HSAAVPPIYHRDVKSSNILL---DEKLNAKVSDFGLSRLVERTETNDSHIFTTAQGTMGY 504
H I HRD+K N+LL +E K++DFG S+++ ++ + T GT Y
Sbjct: 270 HENG---IIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL-----GETSLMRTLCGTPTY 321
Query: 505 LDPEYYRNFQLTDKS---DVYSFGVVLL 529
L PE + + D +S GV+L
Sbjct: 322 LAPEVLVSVGTAGYNRAVDCWSLGVILF 349
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 45/162 (27%), Positives = 72/162 (44%), Gaps = 17/162 (10%)
Query: 376 EVRILCQVNHRSLVRLLGCCVELDQTLMIYEYIPNGTLFDHLHCDFTGKWPPLPWHLRLV 435
EV IL ++ H +++ L ++I E + G LF DF + L
Sbjct: 64 EVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELF-----DFLAEKESLTEEEATE 118
Query: 436 IAHQIAEGLTYLHSAAVPPIYHRDVKSSNILLDE----KLNAKVSDFGLSRLVERTETND 491
QI G+ YLHS + H D+K NI+L + K K+ DFGL+ ++
Sbjct: 119 FLKQILNGVYYLHSLQIA---HFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDF----- 170
Query: 492 SHIFTTAQGTMGYLDPEYYRNFQLTDKSDVYSFGVVLLELLT 533
+ F GT ++ PE L ++D++S GV+ LL+
Sbjct: 171 GNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLS 212
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 51/107 (47%), Gaps = 23/107 (21%)
Query: 436 IAHQIAEGLTYLHSAAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDSHIF 495
+ +Q+ +GL Y+HSA V HRD+K N+ ++E K+ DFGL+R + T
Sbjct: 131 LVYQMLKGLKYIHSAGV---VHRDLKPGNLAVNEDCELKILDFGLARHADAEMT------ 181
Query: 496 TTAQGTMGYLDPEYYRN-------FQLTDKSDVYSFGVVLLELLTSK 535
GY+ +YR D++S G ++ E+LT K
Sbjct: 182 -------GYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGK 221
>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g
pdb|2HW7|A Chain A, Crystal Structure Of Mnk2-D228g In Complex With
Staurosporine
Length = 316
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 51/174 (29%), Positives = 81/174 (46%), Gaps = 22/174 (12%)
Query: 373 VLNEVRILCQVN-HRSLVRLLGCCVELDQTLMIYEYIPNGTLFDHLHCDFTGKWPPLPWH 431
V EV +L Q HR+++ L+ E D+ +++E + G++ H+H K
Sbjct: 57 VFREVEMLYQCQGHRNVLELIEFFEEEDRFYLVFEKMRGGSILSHIH-----KRRHFNEL 111
Query: 432 LRLVIAHQIAEGLTYLHSAAVPPIYHRDVKSSNILLDEKLN---AKVSDFGLSRLVERTE 488
V+ +A L +LH+ I HRD+K NIL + K+ DFGL + +
Sbjct: 112 EASVVVQDVASALDFLHNKG---IAHRDLKPENILCEHPNQVSPVKICDFGLGSGI-KLN 167
Query: 489 TNDSHIFT----TAQGTMGYLDPEYYRNF----QLTDKS-DVYSFGVVLLELLT 533
+ S I T T G+ Y+ PE F + DK D++S GV+L LL+
Sbjct: 168 GDCSPISTPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLS 221
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 88/199 (44%), Gaps = 15/199 (7%)
Query: 338 IGTGGFGEVFKGI-LDDGTVTAIKRAKLGNTKGTDLVLNEVRILCQVNHRSLVRLLGCCV 396
+GTG FG V + G A K + + V E++ + + H +LV L
Sbjct: 165 LGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFE 224
Query: 397 ELDQTLMIYEYIPNGTLFDHLHCDFTGKWPPLPWHLRLVIAHQIAEGLTYLHSAAVPPIY 456
+ ++ +MIYE++ G LF+ + D K + + Q+ +GL ++H
Sbjct: 225 DDNEMVMIYEFMSGGELFEKV-ADEHNK---MSEDEAVEYMRQVCKGLCHMHENN---YV 277
Query: 457 HRDVKSSNILLDEKLNA--KVSDFGLSRLVERTETNDSHIFTTAQGTMGYLDPEYYRNFQ 514
H D+K NI+ K + K+ DFGL+ ++ ++ GT + PE
Sbjct: 278 HLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQS-----VKVTTGTAEFAAPEVAEGKP 332
Query: 515 LTDKSDVYSFGVVLLELLT 533
+ +D++S GV+ LL+
Sbjct: 333 VGYYTDMWSVGVLSYILLS 351
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 45/162 (27%), Positives = 72/162 (44%), Gaps = 17/162 (10%)
Query: 376 EVRILCQVNHRSLVRLLGCCVELDQTLMIYEYIPNGTLFDHLHCDFTGKWPPLPWHLRLV 435
EV IL ++ H +++ L ++I E + G LF DF + L
Sbjct: 64 EVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELF-----DFLAEKESLTEEEATE 118
Query: 436 IAHQIAEGLTYLHSAAVPPIYHRDVKSSNILLDE----KLNAKVSDFGLSRLVERTETND 491
QI G+ YLHS + H D+K NI+L + K K+ DFGL+ ++
Sbjct: 119 FLKQILNGVYYLHSLQIA---HFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDF----- 170
Query: 492 SHIFTTAQGTMGYLDPEYYRNFQLTDKSDVYSFGVVLLELLT 533
+ F GT ++ PE L ++D++S GV+ LL+
Sbjct: 171 GNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLS 212
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 45/162 (27%), Positives = 72/162 (44%), Gaps = 17/162 (10%)
Query: 376 EVRILCQVNHRSLVRLLGCCVELDQTLMIYEYIPNGTLFDHLHCDFTGKWPPLPWHLRLV 435
EV IL ++ H +++ L ++I E + G LF DF + L
Sbjct: 64 EVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELF-----DFLAEKESLTEEEATE 118
Query: 436 IAHQIAEGLTYLHSAAVPPIYHRDVKSSNILLDE----KLNAKVSDFGLSRLVERTETND 491
QI G+ YLHS + H D+K NI+L + K K+ DFGL+ ++
Sbjct: 119 FLKQILNGVYYLHSLQIA---HFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDF----- 170
Query: 492 SHIFTTAQGTMGYLDPEYYRNFQLTDKSDVYSFGVVLLELLT 533
+ F GT ++ PE L ++D++S GV+ LL+
Sbjct: 171 GNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLS 212
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 45/162 (27%), Positives = 72/162 (44%), Gaps = 17/162 (10%)
Query: 376 EVRILCQVNHRSLVRLLGCCVELDQTLMIYEYIPNGTLFDHLHCDFTGKWPPLPWHLRLV 435
EV IL ++ H +++ L ++I E + G LF DF + L
Sbjct: 64 EVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELF-----DFLAEKESLTEEEATE 118
Query: 436 IAHQIAEGLTYLHSAAVPPIYHRDVKSSNILLDE----KLNAKVSDFGLSRLVERTETND 491
QI G+ YLHS + H D+K NI+L + K K+ DFGL+ ++
Sbjct: 119 FLKQILNGVYYLHSLQIA---HFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDF----- 170
Query: 492 SHIFTTAQGTMGYLDPEYYRNFQLTDKSDVYSFGVVLLELLT 533
+ F GT ++ PE L ++D++S GV+ LL+
Sbjct: 171 GNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLS 212
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 45/162 (27%), Positives = 72/162 (44%), Gaps = 17/162 (10%)
Query: 376 EVRILCQVNHRSLVRLLGCCVELDQTLMIYEYIPNGTLFDHLHCDFTGKWPPLPWHLRLV 435
EV IL ++ H +++ L ++I E + G LF DF + L
Sbjct: 64 EVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELF-----DFLAEKESLTEEEATE 118
Query: 436 IAHQIAEGLTYLHSAAVPPIYHRDVKSSNILLDE----KLNAKVSDFGLSRLVERTETND 491
QI G+ YLHS + H D+K NI+L + K K+ DFGL+ ++
Sbjct: 119 FLKQILNGVYYLHSLQIA---HFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDF----- 170
Query: 492 SHIFTTAQGTMGYLDPEYYRNFQLTDKSDVYSFGVVLLELLT 533
+ F GT ++ PE L ++D++S GV+ LL+
Sbjct: 171 GNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLS 212
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 72/162 (44%), Gaps = 17/162 (10%)
Query: 376 EVRILCQVNHRSLVRLLGCCVELDQTLMIYEYIPNGTLFDHLHCDFTGKWPPLPWHLRLV 435
EV IL ++ H +++ L ++I E + G LF DF + L
Sbjct: 63 EVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELF-----DFLAEKESLTEEEATE 117
Query: 436 IAHQIAEGLTYLHSAAVPPIYHRDVKSSNILLDE----KLNAKVSDFGLSRLVERTETND 491
QI G+ YLHS I H D+K NI+L + K K+ DFGL+ ++
Sbjct: 118 FLKQILNGVYYLHSLQ---IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDF----- 169
Query: 492 SHIFTTAQGTMGYLDPEYYRNFQLTDKSDVYSFGVVLLELLT 533
+ F GT ++ PE L ++D++S GV+ LL+
Sbjct: 170 GNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLS 211
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 72/162 (44%), Gaps = 17/162 (10%)
Query: 376 EVRILCQVNHRSLVRLLGCCVELDQTLMIYEYIPNGTLFDHLHCDFTGKWPPLPWHLRLV 435
EV IL ++ H +++ L ++I E + G LF DF + L
Sbjct: 64 EVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELF-----DFLAEKESLTEEEATE 118
Query: 436 IAHQIAEGLTYLHSAAVPPIYHRDVKSSNILLDE----KLNAKVSDFGLSRLVERTETND 491
QI G+ YLHS I H D+K NI+L + K K+ DFGL+ ++
Sbjct: 119 FLKQILNGVYYLHSLQ---IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDF----- 170
Query: 492 SHIFTTAQGTMGYLDPEYYRNFQLTDKSDVYSFGVVLLELLT 533
+ F GT ++ PE L ++D++S GV+ LL+
Sbjct: 171 GNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLS 212
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 45/162 (27%), Positives = 72/162 (44%), Gaps = 17/162 (10%)
Query: 376 EVRILCQVNHRSLVRLLGCCVELDQTLMIYEYIPNGTLFDHLHCDFTGKWPPLPWHLRLV 435
EV IL ++ H +++ L ++I E + G LF DF + L
Sbjct: 64 EVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELF-----DFLAEKESLTEEEATE 118
Query: 436 IAHQIAEGLTYLHSAAVPPIYHRDVKSSNILLDE----KLNAKVSDFGLSRLVERTETND 491
QI G+ YLHS + H D+K NI+L + K K+ DFGL+ ++
Sbjct: 119 FLKQILNGVYYLHSLQIA---HFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDF----- 170
Query: 492 SHIFTTAQGTMGYLDPEYYRNFQLTDKSDVYSFGVVLLELLT 533
+ F GT ++ PE L ++D++S GV+ LL+
Sbjct: 171 GNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLS 212
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 72/162 (44%), Gaps = 17/162 (10%)
Query: 376 EVRILCQVNHRSLVRLLGCCVELDQTLMIYEYIPNGTLFDHLHCDFTGKWPPLPWHLRLV 435
EV IL ++ H +++ L ++I E + G LF DF + L
Sbjct: 64 EVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELF-----DFLAEKESLTEEEATE 118
Query: 436 IAHQIAEGLTYLHSAAVPPIYHRDVKSSNILLDE----KLNAKVSDFGLSRLVERTETND 491
QI G+ YLHS I H D+K NI+L + K K+ DFGL+ ++
Sbjct: 119 FLKQILNGVYYLHSLQ---IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDF----- 170
Query: 492 SHIFTTAQGTMGYLDPEYYRNFQLTDKSDVYSFGVVLLELLT 533
+ F GT ++ PE L ++D++S GV+ LL+
Sbjct: 171 GNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLS 212
>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O17|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O2M|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
pdb|3O2M|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
Length = 370
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 50/207 (24%), Positives = 85/207 (41%), Gaps = 25/207 (12%)
Query: 338 IGTGGFGEV---FKGILDDGTVTAIKRAKLGNTKGTDLVLNEVRILCQVNHRSLVRLLGC 394
IG+G G V + IL+ N E+ ++ VNH++++ LL
Sbjct: 32 IGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNV 91
Query: 395 -----CVELDQTLMIYEYIPNGTLFDHLHCDFTGKWPPLPWHLRL-VIAHQIAEGLTYLH 448
+E Q + I + + L + + H R+ + +Q+ G+ +LH
Sbjct: 92 FTPQKSLEEFQDVYIVMELMDANLCQVIQMELD--------HERMSYLLYQMLCGIKHLH 143
Query: 449 SAAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDSHIFTTAQGTMGYLDPE 508
SA I HRD+K SNI++ K+ DFGL+R S + T Y PE
Sbjct: 144 SAG---IIHRDLKPSNIVVKSDCTLKILDFGLAR-----TAGTSFMMEPEVVTRYYRAPE 195
Query: 509 YYRNFQLTDKSDVYSFGVVLLELLTSK 535
+ D++S G ++ E++ K
Sbjct: 196 VILGMGYKENVDIWSVGCIMGEMVCHK 222
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 72/162 (44%), Gaps = 17/162 (10%)
Query: 376 EVRILCQVNHRSLVRLLGCCVELDQTLMIYEYIPNGTLFDHLHCDFTGKWPPLPWHLRLV 435
EV IL ++ H +++ L ++I E + G LF DF + L
Sbjct: 64 EVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELF-----DFLAEKESLTEEEATE 118
Query: 436 IAHQIAEGLTYLHSAAVPPIYHRDVKSSNILLDE----KLNAKVSDFGLSRLVERTETND 491
QI G+ YLHS I H D+K NI+L + K K+ DFGL+ ++
Sbjct: 119 FLKQILNGVYYLHSLQ---IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDF----- 170
Query: 492 SHIFTTAQGTMGYLDPEYYRNFQLTDKSDVYSFGVVLLELLT 533
+ F GT ++ PE L ++D++S GV+ LL+
Sbjct: 171 GNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLS 212
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 45/162 (27%), Positives = 72/162 (44%), Gaps = 17/162 (10%)
Query: 376 EVRILCQVNHRSLVRLLGCCVELDQTLMIYEYIPNGTLFDHLHCDFTGKWPPLPWHLRLV 435
EV IL ++ H +++ L ++I E + G LF DF + L
Sbjct: 64 EVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELF-----DFLAEKESLTEEEATE 118
Query: 436 IAHQIAEGLTYLHSAAVPPIYHRDVKSSNILLDE----KLNAKVSDFGLSRLVERTETND 491
QI G+ YLHS + H D+K NI+L + K K+ DFGL+ ++
Sbjct: 119 FLKQILNGVYYLHSLQIA---HFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDF----- 170
Query: 492 SHIFTTAQGTMGYLDPEYYRNFQLTDKSDVYSFGVVLLELLT 533
+ F GT ++ PE L ++D++S GV+ LL+
Sbjct: 171 GNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLS 212
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 72/162 (44%), Gaps = 17/162 (10%)
Query: 376 EVRILCQVNHRSLVRLLGCCVELDQTLMIYEYIPNGTLFDHLHCDFTGKWPPLPWHLRLV 435
EV IL ++ H +++ L ++I E + G LF DF + L
Sbjct: 63 EVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELF-----DFLAEKESLTEEEATE 117
Query: 436 IAHQIAEGLTYLHSAAVPPIYHRDVKSSNILLDE----KLNAKVSDFGLSRLVERTETND 491
QI G+ YLHS I H D+K NI+L + K K+ DFGL+ ++
Sbjct: 118 FLKQILNGVYYLHSLQ---IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDF----- 169
Query: 492 SHIFTTAQGTMGYLDPEYYRNFQLTDKSDVYSFGVVLLELLT 533
+ F GT ++ PE L ++D++S GV+ LL+
Sbjct: 170 GNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLS 211
>pdb|3LL6|A Chain A, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
pdb|3LL6|B Chain B, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
Length = 337
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 56/240 (23%), Positives = 99/240 (41%), Gaps = 29/240 (12%)
Query: 312 AAGKSARIFTGKEIRRATNNFSKDNLIGTGGFGEVFKGI-LDDGTVTAIKRAKLGNTKGT 370
A+G+ F G+ + ++ GGF V++ + G A+KR +
Sbjct: 10 ASGRDQSDFVGQTVELGELRLRVRRVLAEGGFAFVYEAQDVGSGREYALKRLLSNEEEKN 69
Query: 371 DLVLNEVRILCQVN-HRSLVRLLGCCV----ELD---QTLMIYEYIPNGTLFDHLH-CDF 421
++ EV + +++ H ++V+ E D ++ + G L + L +
Sbjct: 70 RAIIQEVCFMKKLSGHPNIVQFCSAASIGKEESDTGQAEFLLLTELCKGQLVEFLKKMES 129
Query: 422 TGKWPPLPWHLRLVIAHQIAEGLTYLHSAAVPPIYHRDVKSSNILLDEKLNAKVSDFGLS 481
G PL L I +Q + ++H PPI HRD+K N+LL + K+ DFG +
Sbjct: 130 RG---PLSCDTVLKIFYQTCRAVQHMHRQK-PPIIHRDLKVENLLLSNQGTIKLCDFGSA 185
Query: 482 RLV----------ERTETNDSHIFTTAQGTMGYLDPE---YYRNFQLTDKSDVYSFGVVL 528
+ +R + I T T Y PE Y NF + +K D+++ G +L
Sbjct: 186 TTISHYPDYSWSAQRRALVEEEI--TRNTTPMYRTPEIIDLYSNFPIGEKQDIWALGCIL 243
>pdb|3LJ0|A Chain A, Ire1 Complexed With Adp And Quercetin
pdb|3LJ0|B Chain B, Ire1 Complexed With Adp And Quercetin
pdb|3LJ1|A Chain A, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ1|B Chain B, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ2|A Chain A, Ire1 Complexed With Jak Inhibitor I
pdb|3LJ2|B Chain B, Ire1 Complexed With Jak Inhibitor I
Length = 434
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 76/313 (24%), Positives = 130/313 (41%), Gaps = 51/313 (16%)
Query: 335 DNLIGTGGFGEV-FKGILDDGTVTAIKRAKLGNTKGTDLVLNEVRILCQVN-HRSLVRLL 392
+ ++G G G V F+G G A+KR + D+ L E+++L + + H +++R
Sbjct: 20 EKILGYGSSGTVVFQGSFQ-GRPVAVKRMLID---FCDIALMEIKLLTESDDHPNVIRYY 75
Query: 393 GCCVELDQTLMIYEYIPNGTLFDHL--------HCDFTGKWPPLPWHLRLVIAHQIAEGL 444
C D+ L I + N L D + + ++ P+ + QIA G+
Sbjct: 76 -CSETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPIS------LLRQIASGV 128
Query: 445 TYLHSAAVPPIYHRDVKSSNILLD-------------EKLNAKVSDFGLSRLVERTETND 491
+LHS I HRD+K NIL+ E L +SDFGL + ++ +
Sbjct: 129 AHLHSLK---IIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQXXF 185
Query: 492 SHIFTTAQGTMGYLDPEYYR---NFQ----LTDKSDVYSFGVVLLELLTSKKAI--DFNR 542
GT G+ PE N Q LT D++S G V +L+ K D
Sbjct: 186 RXNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYS 245
Query: 543 EEENVNLVVY----MKKIMDEERLMEVVDPVLKERATHLDLETMKALGLLAASCLDERRQ 598
E N+ ++ MK + D + E D ++ + H L+ A+ +L + +
Sbjct: 246 RESNIIRGIFSLDEMKCLHDRSLIAEATD-LISQMIDHDPLKRPTAMKVLRHPLFWPKSK 304
Query: 599 NRPSMKEVADEIE 611
+ +V+D +E
Sbjct: 305 KLEFLLKVSDRLE 317
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 88/199 (44%), Gaps = 15/199 (7%)
Query: 338 IGTGGFGEVFKGI-LDDGTVTAIKRAKLGNTKGTDLVLNEVRILCQVNHRSLVRLLGCCV 396
+GTG FG V + G A K + + V E++ + + H +LV L
Sbjct: 59 LGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFE 118
Query: 397 ELDQTLMIYEYIPNGTLFDHLHCDFTGKWPPLPWHLRLVIAHQIAEGLTYLHSAAVPPIY 456
+ ++ +MIYE++ G LF+ + D K + + Q+ +GL ++H
Sbjct: 119 DDNEMVMIYEFMSGGELFEKV-ADEHNK---MSEDEAVEYMRQVCKGLCHMHENN---YV 171
Query: 457 HRDVKSSNILLDEKLNA--KVSDFGLSRLVERTETNDSHIFTTAQGTMGYLDPEYYRNFQ 514
H D+K NI+ K + K+ DFGL+ ++ ++ GT + PE
Sbjct: 172 HLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQS-----VKVTTGTAEFAAPEVAEGKP 226
Query: 515 LTDKSDVYSFGVVLLELLT 533
+ +D++S GV+ LL+
Sbjct: 227 VGYYTDMWSVGVLSYILLS 245
>pdb|3N9X|A Chain A, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
pdb|3N9X|B Chain B, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
Length = 432
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 59/246 (23%), Positives = 99/246 (40%), Gaps = 30/246 (12%)
Query: 312 AAGKSARIFTGKEIRRATNNFSKDNLIGTGGFGEVFKGILDDGTVTAIKRAKLGNTKGTD 371
++G+ F G + +N+ +LIG G +G V+ D T + K+ N D
Sbjct: 8 SSGRENLYFQGIKNVHVPDNYIIKHLIGRGSYGYVYLA-YDKNTEKNVAIKKV-NRMFED 65
Query: 372 LV-----LNEVRILCQVNHRSLVRLLGCCVELDQTLMIYEYIPNGTLFDHLHCDFTGKWP 426
L+ L E+ IL ++ ++RL + D YI L F
Sbjct: 66 LIDCKRILREITILNRLKSDYIIRLYDLIIPDDLLKFDELYIVLEIADSDLKKLFKTPIF 125
Query: 427 PLPWHLRLVIAHQIAEGLTYLHSAAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLV-- 484
H++ I + + G ++H + I HRD+K +N LL++ + KV DFGL+R +
Sbjct: 126 LTEEHIK-TILYNLLLGENFIHESG---IIHRDLKPANCLLNQDCSVKVCDFGLARTINS 181
Query: 485 ----------ERTETNDSHIFTTAQGTMGYLDPEYYRNFQL-------TDKSDVYSFGVV 527
E E H + ++ +YR +L T D++S G +
Sbjct: 182 EKDTNIVNDLEENEEPGPHNKNLKKQLTSHVVTRWYRAPELILLQENYTKSIDIWSTGCI 241
Query: 528 LLELLT 533
ELL
Sbjct: 242 FAELLN 247
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 72/162 (44%), Gaps = 17/162 (10%)
Query: 376 EVRILCQVNHRSLVRLLGCCVELDQTLMIYEYIPNGTLFDHLHCDFTGKWPPLPWHLRLV 435
EV IL ++ H +++ L ++I E + G LF DF + L
Sbjct: 64 EVSILKEIQHPNVITLHEVYENKTDVILIGELVAGGELF-----DFLAEKESLTEEEATE 118
Query: 436 IAHQIAEGLTYLHSAAVPPIYHRDVKSSNILLDE----KLNAKVSDFGLSRLVERTETND 491
QI G+ YLHS I H D+K NI+L + K K+ DFGL+ ++
Sbjct: 119 FLKQILNGVYYLHSLQ---IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDF----- 170
Query: 492 SHIFTTAQGTMGYLDPEYYRNFQLTDKSDVYSFGVVLLELLT 533
+ F GT ++ PE L ++D++S GV+ LL+
Sbjct: 171 GNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLS 212
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 53/101 (52%), Gaps = 13/101 (12%)
Query: 437 AHQIAEGLTYLHSAAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVER----TETNDS 492
+ Q+A G+ +L S HRD+ + NILL E K+ DFGL+R + + D+
Sbjct: 205 SFQVARGMEFLSSRKC---IHRDLAARNILLSENNVVKICDFGLARDIYKNPDYVRKGDT 261
Query: 493 HIFTTAQGTMGYLDPEYYRNFQLTDKSDVYSFGVVLLELLT 533
+ + ++ PE + + KSDV+S+GV+L E+ +
Sbjct: 262 RL------PLKWMAPESIFDKIYSTKSDVWSYGVLLWEIFS 296
Score = 35.8 bits (81), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 44/89 (49%), Gaps = 9/89 (10%)
Query: 338 IGTGGFGEVFK----GILDDGT--VTAIKRAKLGNTKGT-DLVLNEVRILCQVNHR-SLV 389
+G G FG+V + GI T A+K K G T ++ E++IL + H ++V
Sbjct: 35 LGRGAFGKVVQASAFGIKKSPTCRTVAVKMLKEGATASEYKALMTELKILTHIGHHLNVV 94
Query: 390 RLLGCCVELDQTLM-IYEYIPNGTLFDHL 417
LLG C + LM I EY G L ++L
Sbjct: 95 NLLGACTKQGGPLMVIVEYCKYGNLSNYL 123
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 49/204 (24%), Positives = 84/204 (41%), Gaps = 25/204 (12%)
Query: 338 IGTGGFGEV---FKGILDDGTVTAIKRAKLGNTKGTDLVLNEVRILCQVNHRSLVRLLGC 394
IG+G G V + IL+ N E+ ++ VNH++++ LL
Sbjct: 34 IGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNV 93
Query: 395 -----CVELDQTLMIYEYIPNGTLFDHLHCDFTGKWPPLPWHLRL-VIAHQIAEGLTYLH 448
+E Q + I + + L + + H R+ + +Q+ G+ +LH
Sbjct: 94 FTPQKSLEEFQDVYIVMELMDANLCQVIQMELD--------HERMSYLLYQMLCGIKHLH 145
Query: 449 SAAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDSHIFTTAQGTMGYLDPE 508
SA I HRD+K SNI++ K+ DFGL+R S + T Y PE
Sbjct: 146 SAG---IIHRDLKPSNIVVKSDCTLKILDFGLAR-----TAGTSFMMVPFVVTRYYRAPE 197
Query: 509 YYRNFQLTDKSDVYSFGVVLLELL 532
+ D++S G ++ E++
Sbjct: 198 VILGMGYKENVDIWSVGCIMGEMI 221
>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2G01|B Chain B, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2GMX|A Chain A, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2GMX|B Chain B, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2H96|A Chain A, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2H96|B Chain B, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2NO3|A Chain A, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
pdb|2NO3|B Chain B, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
Length = 370
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 50/207 (24%), Positives = 85/207 (41%), Gaps = 25/207 (12%)
Query: 338 IGTGGFGEV---FKGILDDGTVTAIKRAKLGNTKGTDLVLNEVRILCQVNHRSLVRLLGC 394
IG+G G V + IL+ N E+ ++ VNH++++ LL
Sbjct: 32 IGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNV 91
Query: 395 -----CVELDQTLMIYEYIPNGTLFDHLHCDFTGKWPPLPWHLRL-VIAHQIAEGLTYLH 448
+E Q + I + + L + + H R+ + +Q+ G+ +LH
Sbjct: 92 FTPQKSLEEFQDVYIVMELMDANLCQVIQMELD--------HERMSYLLYQMLCGIKHLH 143
Query: 449 SAAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDSHIFTTAQGTMGYLDPE 508
SA I HRD+K SNI++ K+ DFGL+R S + T Y PE
Sbjct: 144 SAG---IIHRDLKPSNIVVKSDCTLKILDFGLAR-----TAGTSFMMEPEVVTRYYRAPE 195
Query: 509 YYRNFQLTDKSDVYSFGVVLLELLTSK 535
+ D++S G ++ E++ K
Sbjct: 196 VILGMGYKENVDLWSVGCIMGEMVCHK 222
>pdb|3E3P|A Chain A, Glycogen Synthase Kinase From Leishmania Major
pdb|3E3P|B Chain B, Glycogen Synthase Kinase From Leishmania Major
Length = 360
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 61/235 (25%), Positives = 108/235 (45%), Gaps = 26/235 (11%)
Query: 308 LNAKAAGKSARIFTGKEIRRATNNFSKDNLIGTGGFGEVFKGILDD-GTVTAIKRAKLGN 366
LNA AA + R+ + F + + G G FG V G G AIK+ + +
Sbjct: 8 LNAAAAA-------DERSRKEMDRFQVERMAGQGTFGTVQLGKEKSTGMSVAIKKV-IQD 59
Query: 367 TKGTDLVLNEVRILCQVNHRSLVRL------LGCCVELDQTL-MIYEYIPNGTLFDHLHC 419
+ + L ++ L ++H ++V+L LG D L ++ EY+P+ TL
Sbjct: 60 PRFRNRELQIMQDLAVLHHPNIVQLQSYFYTLGERDRRDIYLNVVMEYVPD-TLHRCCRN 118
Query: 420 DFTGKWPPLPWHLRLVIAHQIAEGLTYLHSAAVPPIYHRDVKSSNILLDEKLNA-KVSDF 478
+ + P P ++ V Q+ + LH +V + HRD+K N+L++E K+ DF
Sbjct: 119 YYRRQVAPPPILIK-VFLFQLIRSIGCLHLPSVN-VCHRDIKPHNVLVNEADGTLKLCDF 176
Query: 479 GLSRLVERTETNDSHIFTTAQGTMGYLDPEY-YRNFQLTDKSDVYSFGVVLLELL 532
G ++ + +E N ++I + Y PE + N T D++S G + E++
Sbjct: 177 GSAKKLSPSEPNVAYICSRY-----YRAPELIFGNQHYTTAVDIWSVGCIFAEMM 226
>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3
Length = 361
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 69/237 (29%), Positives = 105/237 (44%), Gaps = 34/237 (14%)
Query: 331 NFSKDNLIGTGGFGEVFKGILDDGT--VTAIKRAKLGNTKGTDLVLNEVRILCQVNHRSL 388
+F KD IG+G FG V + + D T + A+K + G + V E+ +NHRSL
Sbjct: 23 DFVKD--IGSGNFG-VARLMRDKLTKELVAVKYIERGAAIDEN-VQREI-----INHRSL 73
Query: 389 -----VRLLGCCVELDQTLMIYEYIPNGTLFDHLHCDFTGKWPPLPWHLRLVIAHQIAEG 443
VR + +I EY G L++ + C+ G++ Q+ G
Sbjct: 74 RHPNIVRFKEVILTPTHLAIIMEYASGGELYERI-CN-AGRFSEDEARF---FFQQLLSG 128
Query: 444 LTYLHSAAVPPIYHRDVKSSNILLD--EKLNAKVSDFGLSRLVERTETNDSHIFTTAQGT 501
++Y HS I HRD+K N LLD K+ DFG S ++ S +T GT
Sbjct: 129 VSYCHSMQ---ICHRDLKLENTLLDGSPAPRLKICDFGYS----KSSVLHSQPKSTV-GT 180
Query: 502 MGYLDPEYYRNFQLTDK-SDVYSFGVVLLELLTSKKAIDFNREEENVNLVVYMKKIM 557
Y+ PE + K +DV+S GV L +L A F EE + +++I+
Sbjct: 181 PAYIAPEVLLRQEYDGKIADVWSCGVTLYVMLVG--AYPFEDPEEPRDYRKTIQRIL 235
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 57/233 (24%), Positives = 97/233 (41%), Gaps = 29/233 (12%)
Query: 334 KDNLIGTGGFGE----VFKGILDDGTVTAIKRAKLGNTKGTDLVLNEVRILCQVNHRSLV 389
KD +G G F V K V I + NT+ L LC+ H ++V
Sbjct: 15 KDKPLGEGSFSICRKCVHKKSNQAFAVKIISKRMEANTQKEITALK----LCE-GHPNIV 69
Query: 390 RLLGCCVELDQTLMIYEYIPNGTLFDHLHCDFTGKWPPLPWHLRLVIAHQIAEGLTYLHS 449
+L + T ++ E + G LF+ + K I ++ ++++H
Sbjct: 70 KLHEVFHDQLHTFLVMELLNGGELFERI-----KKKKHFSETEASYIMRKLVSAVSHMHD 124
Query: 450 AAVPPIYHRDVKSSNILL---DEKLNAKVSDFGLSRLVERTETNDSHIFTTAQGTMGYLD 506
V HRD+K N+L ++ L K+ DFG +RL + D+ T T+ Y
Sbjct: 125 VGV---VHRDLKPENLLFTDENDNLEIKIIDFGFARL----KPPDNQPLKTPCFTLHYAA 177
Query: 507 PEYYRNFQLTDKSDVYSFGVVLLELLTSKKAIDFNREEENV---NLVVYMKKI 556
PE + D++S GV+L +L+ + + F + ++ + V MKKI
Sbjct: 178 PELLNQNGYDESCDLWSLGVILYTMLSGQ--VPFQSHDRSLTCTSAVEIMKKI 228
>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain
pdb|2HW6|B Chain B, Crystal Structure Of Mnk1 Catalytic Domain
Length = 307
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 95/214 (44%), Gaps = 27/214 (12%)
Query: 336 NLIGTGGFGEVFKGI-LDDGTVTAIKRAKLGNTKGTDLVLNEVRIL--CQVNHRSLVRLL 392
L+G G + +V + L +G A+K + V EV L CQ N ++++ L+
Sbjct: 19 ELLGEGAYAKVQGAVSLQNGKEYAVKIIEKQAGHSRSRVFREVETLYQCQGN-KNILELI 77
Query: 393 GCCVELDQTLMIYEYIPNGTLFDHLHCDFTGKWPPLPWHLRLVIAHQIAEGLTYLHSAAV 452
+ + +++E + G++ H+ K + +A L +LH+
Sbjct: 78 EFFEDDTRFYLVFEKLQGGSILAHIQ-----KQKHFNEREASRVVRDVAAALDFLHTKG- 131
Query: 453 PPIYHRDVKSSNILLD--EKLN-AKVSDFGLS---RLVERTETNDSHIFTTAQGTMGYLD 506
I HRD+K NIL + EK++ K+ DF L +L + TT G+ Y+
Sbjct: 132 --IAHRDLKPENILCESPEKVSPVKICDFDLGSGMKLNNSCTPITTPELTTPCGSAEYMA 189
Query: 507 PEYYRNFQLTDKS-------DVYSFGVVLLELLT 533
PE F TD++ D++S GVVL +L+
Sbjct: 190 PEVVEVF--TDQATFYDKRCDLWSLGVVLYIMLS 221
>pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6
pdb|3UC4|B Chain B, The Crystal Structure Of Snf1-Related Kinase 2.6
Length = 362
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 65/231 (28%), Positives = 102/231 (44%), Gaps = 32/231 (13%)
Query: 338 IGTGGFGEVFKGILDDGT--VTAIKRAKLGNTKGTDLVLNEVRILCQVNHRSL-----VR 390
IG+G FG V + + D + + A+K + +G + N R + +NHRSL VR
Sbjct: 27 IGSGNFG-VARLMRDKQSNELVAVKYIE----RGEKIAANVKREI--INHRSLRHPNIVR 79
Query: 391 LLGCCVELDQTLMIYEYIPNGTLFDHLHCDFTGKWPPLPWHLRLVIAHQIAEGLTYLHSA 450
+ ++ EY G LF+ + C+ G++ Q+ G++Y H+
Sbjct: 80 FKEVILTPTHLAIVMEYASGGELFERI-CN-AGRFSEDEARFFF---QQLISGVSYCHAM 134
Query: 451 AVPPIYHRDVKSSNILLD--EKLNAKVSDFGLSRLVERTETNDSHIFTTAQGTMGYLDPE 508
V HRD+K N LLD K+ DFG S ++ S +T GT Y+ PE
Sbjct: 135 QV---CHRDLKLENTLLDGSPAPRLKICDFGYS----KSSVLHSQPKSTV-GTPAYIAPE 186
Query: 509 YYRNFQLTDK-SDVYSFGVVLLELLTSKKAIDFNREEENVNLVVYMKKIMD 558
+ K +DV+S GV L +L A F EE N + +I++
Sbjct: 187 VLLKKEYDGKVADVWSCGVTLYVMLVG--AYPFEDPEEPKNFRKTIHRILN 235
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 88/202 (43%), Gaps = 18/202 (8%)
Query: 338 IGTGGFGEVFK-GILDDGTVTAIKRAKLG-NTKGTDLVLNEVRI-LCQVNHRSLVRLLGC 394
+G G +G V K + G + A+KR + N++ +L ++ I + V+ V G
Sbjct: 15 LGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGA 74
Query: 395 CVELDQTLMIYEYIPNGTLFDHLHCDFTGKWPPLPWHLRLVIAHQIAEGLTYLHSAAVPP 454
+ E + T D + K +P + IA I + L +LHS
Sbjct: 75 LFREGDVWICMELM--DTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKL--S 130
Query: 455 IYHRDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDSHIFTTAQGTMGYLDPEYYRNFQ 514
+ HRDVK SN+L++ K+ DFG+S + D G Y+ PE N +
Sbjct: 131 VIHRDVKPSNVLINALGQVKMCDFGISGYLVDDVAKD-----IDAGCKPYMAPERI-NPE 184
Query: 515 LTD-----KSDVYSFGVVLLEL 531
L KSD++S G+ ++EL
Sbjct: 185 LNQKGYSVKSDIWSLGITMIEL 206
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 48/167 (28%), Positives = 76/167 (45%), Gaps = 20/167 (11%)
Query: 374 LNEVRILCQVN-HRSLVRLLGCCVELDQTLMIYEYIPNGTLFDHLHCDFTGKWPPLPWHL 432
L EV IL +V+ H ++++L ++++ + G LFD+L T L
Sbjct: 71 LKEVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVT-----LSEKE 125
Query: 433 RLVIAHQIAEGLTYLHSAAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDS 492
I + E + LH I HRD+K NILLD+ +N K++DFG S ++ E
Sbjct: 126 TRKIMRALLEVICALHKLN---IVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEK--- 179
Query: 493 HIFTTAQGTMGYLDPEYYR------NFQLTDKSDVYSFGVVLLELLT 533
+ GT YL PE + + D++S GV++ LL
Sbjct: 180 --LRSVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLA 224
>pdb|3NIE|A Chain A, Crystal Structure Of Pf11_0147
pdb|3NIE|B Chain B, Crystal Structure Of Pf11_0147
Length = 429
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 61/258 (23%), Positives = 105/258 (40%), Gaps = 41/258 (15%)
Query: 312 AAGKSARIFTGKEIR--RATNNFSKDNLIGTGGFGEVFKGILDDGTV-TAIKRAKLGNTK 368
++G+ F G I+ + +N+ +LIG G +G V+ + AIK+ N
Sbjct: 8 SSGRENLYFQGAIIKNVKVPDNYEIKHLIGRGSYGYVYLAYDKNANKNVAIKKV---NRM 64
Query: 369 GTDLV-----LNEVRILCQVNHRSLVRLLGCCVELDQTLMIYEYIPNGTLFDHLHCDFTG 423
DL+ L E+ IL ++ ++RL + D YI L F
Sbjct: 65 FEDLIDCKRILREITILNRLKSDYIIRLHDLIIPEDLLKFDELYIVLEIADSDLKKLFKT 124
Query: 424 KWPPLPWHLRLVIAHQIAEGLTYLHSAAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRL 483
H++ I + + G ++H + I HRD+K +N LL++ + K+ DFGL+R
Sbjct: 125 PIFLTEQHVK-TILYNLLLGEKFIHESG---IIHRDLKPANCLLNQDCSVKICDFGLART 180
Query: 484 VERTETNDSHIFTTAQGTMGYLDP-----------------EYYRNFQL-------TDKS 519
+ + D HI + +P +YR +L T+
Sbjct: 181 INSDK--DIHIVNDLEEKEENEEPGPHNKNLKKQLTSHVVTRWYRAPELILLQENYTNSI 238
Query: 520 DVYSFGVVLLELLTSKKA 537
D++S G + ELL K+
Sbjct: 239 DIWSTGCIFAELLNMMKS 256
>pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1
Length = 361
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 66/231 (28%), Positives = 102/231 (44%), Gaps = 32/231 (13%)
Query: 338 IGTGGFGEVFKGILDDGT--VTAIKRAKLGNTKGTDLVLNEVRILCQVNHRSL-----VR 390
IG+G FG V + + D + + A+K + G K + V E+ +NHRSL VR
Sbjct: 26 IGSGNFG-VARLMRDKQSNELVAVKYIERGE-KIDENVKREI-----INHRSLRHPNIVR 78
Query: 391 LLGCCVELDQTLMIYEYIPNGTLFDHLHCDFTGKWPPLPWHLRLVIAHQIAEGLTYLHSA 450
+ ++ EY G LF+ + C+ G++ Q+ G++Y H+
Sbjct: 79 FKEVILTPTHLAIVMEYASGGELFERI-CN-AGRFSEDEARFFF---QQLISGVSYCHAM 133
Query: 451 AVPPIYHRDVKSSNILLD--EKLNAKVSDFGLSRLVERTETNDSHIFTTAQGTMGYLDPE 508
V HRD+K N LLD K+ DFG S ++ S +T GT Y+ PE
Sbjct: 134 QV---CHRDLKLENTLLDGSPAPRLKICDFGYS----KSSVLHSQPKSTV-GTPAYIAPE 185
Query: 509 YYRNFQLTDK-SDVYSFGVVLLELLTSKKAIDFNREEENVNLVVYMKKIMD 558
+ K +DV+S GV L +L A F EE N + +I++
Sbjct: 186 VLLKKEYDGKVADVWSCGVTLYVMLVG--AYPFEDPEEPKNFRKTIHRILN 234
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 88/212 (41%), Gaps = 27/212 (12%)
Query: 336 NLIGTGGFGEVFKGI-LDDGTVTAIK---RAKLGNTKG--TDLVLNEVRILCQVNHRSLV 389
+IG G F V + I + G A+K AK ++ G T+ + E I + H +V
Sbjct: 30 EVIGKGAFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIV 89
Query: 390 RLLGCCVELDQTLMIYEYIPNGTL----FDHLHCDFTGKWPPLPWHLRLVIAHQIAEGLT 445
LL M++E++ L F ++R QI E L
Sbjct: 90 ELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMR-----QILEALR 144
Query: 446 YLHSAAVPPIYHRDVKSSNILLDEKLNA---KVSDFGLSRLVERTETNDSHIFTTAQ-GT 501
Y H I HRDVK N+LL K N+ K+ DFG++ + +S + + GT
Sbjct: 145 YCHDNN---IIHRDVKPENVLLASKENSAPVKLGDFGVA-----IQLGESGLVAGGRVGT 196
Query: 502 MGYLDPEYYRNFQLTDKSDVYSFGVVLLELLT 533
++ PE + DV+ GV+L LL+
Sbjct: 197 PHFMAPEVVKREPYGKPVDVWGCGVILFILLS 228
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 48/167 (28%), Positives = 75/167 (44%), Gaps = 20/167 (11%)
Query: 374 LNEVRILCQVN-HRSLVRLLGCCVELDQTLMIYEYIPNGTLFDHLHCDFTGKWPPLPWHL 432
L EV IL +V+ H ++++L ++++ + G LFD+L T L
Sbjct: 58 LKEVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVT-----LSEKE 112
Query: 433 RLVIAHQIAEGLTYLHSAAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDS 492
I + E + LH I HRD+K NILLD+ +N K++DFG S ++ E
Sbjct: 113 TRKIMRALLEVICALHKLN---IVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEK--- 166
Query: 493 HIFTTAQGTMGYLDPEYYR------NFQLTDKSDVYSFGVVLLELLT 533
GT YL PE + + D++S GV++ LL
Sbjct: 167 --LREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLA 211
>pdb|4ALU|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 70/257 (27%), Positives = 115/257 (44%), Gaps = 28/257 (10%)
Query: 316 SARIFTGKEIRRATNNFSKDNLIGTGGFGEVFKGI-LDDGTVTAIKRAK------LGNTK 368
+ ++ GKE + + L+G+GG G V+ GI + D AIK + G
Sbjct: 37 ATKLAPGKEKEPLESQYQVGPLLGSGGSGSVYSGIRVSDNLPVAIKHVEKDRISDWGELP 96
Query: 369 GTDLVLNEVRILCQVN--HRSLVRLLGCCVELDQTLMIYEYI-PNGTLFDHLHCDFTGKW 425
V EV +L +V+ ++RLL D ++I E P LF DF +
Sbjct: 97 NGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLF-----DFITER 151
Query: 426 PPLPWHLRLVIAHQIAEGLTYLHSAAVPPIYHRDVKSSNILLD-EKLNAKVSDFGLSRLV 484
L L Q+ E + + H+ V HRD+K NIL+D + K+ DFG L+
Sbjct: 152 GALQEELARSFFWQVLEAVRHCHNCGV---LHRDIKDENILIDLNRGELKLIDFGSGALL 208
Query: 485 ERTETNDSHIFTTAQGTMGYLDPEYYRNFQLTDKS-DVYSFGVVLLELLTSKKAIDFNRE 543
+ T ++T GT Y PE+ R + +S V+S G++L +++ I F +
Sbjct: 209 KDT------VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGD--IPFEHD 260
Query: 544 EENVNLVVYMKKIMDEE 560
EE + V+ ++ + E
Sbjct: 261 EEIIRGQVFFRQRVSSE 277
>pdb|2AC3|A Chain A, Structure Of Human Mnk2 Kinase Domain
Length = 316
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 50/174 (28%), Positives = 80/174 (45%), Gaps = 22/174 (12%)
Query: 373 VLNEVRILCQVN-HRSLVRLLGCCVELDQTLMIYEYIPNGTLFDHLHCDFTGKWPPLPWH 431
V EV +L Q HR+++ L+ E D+ +++E + G++ H+H K
Sbjct: 57 VFREVEMLYQCQGHRNVLELIEFFEEEDRFYLVFEKMRGGSILSHIH-----KRRHFNEL 111
Query: 432 LRLVIAHQIAEGLTYLHSAAVPPIYHRDVKSSNILLDEKLN---AKVSDFGLSRLVERTE 488
V+ +A L +LH+ I HRD+K NIL + K+ DF L + +
Sbjct: 112 EASVVVQDVASALDFLHNKG---IAHRDLKPENILCEHPNQVSPVKICDFDLGSGI-KLN 167
Query: 489 TNDSHIFT----TAQGTMGYLDPEYYRNF----QLTDKS-DVYSFGVVLLELLT 533
+ S I T T G+ Y+ PE F + DK D++S GV+L LL+
Sbjct: 168 GDCSPISTPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLS 221
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 48/167 (28%), Positives = 75/167 (44%), Gaps = 20/167 (11%)
Query: 374 LNEVRILCQVN-HRSLVRLLGCCVELDQTLMIYEYIPNGTLFDHLHCDFTGKWPPLPWHL 432
L EV IL +V+ H ++++L ++++ + G LFD+L T L
Sbjct: 71 LKEVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVT-----LSEKE 125
Query: 433 RLVIAHQIAEGLTYLHSAAVPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVERTETNDS 492
I + E + LH I HRD+K NILLD+ +N K++DFG S ++ E
Sbjct: 126 TRKIMRALLEVICALHKLN---IVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEK--- 179
Query: 493 HIFTTAQGTMGYLDPEYYR------NFQLTDKSDVYSFGVVLLELLT 533
GT YL PE + + D++S GV++ LL
Sbjct: 180 --LREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLA 224
>pdb|1NA7|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2
Length = 329
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 54/235 (22%), Positives = 108/235 (45%), Gaps = 25/235 (10%)
Query: 338 IGTGGFGEVFKGILDDGTVTAIKRAKLGNTKGTDLVLNEVRILCQVNHRSLVRLLGCCVE 397
+G G + EVF+ I + K+ + + E++IL + + L V+
Sbjct: 45 LGRGKYSEVFEAINITNNEKVV--VKILKPVKKNKIKREIKILENLRGGPNIITLADIVK 102
Query: 398 --LDQT-LMIYEYIPNGTLFDHLHCDFTGKWPPLPWHLRLVIAHQIAEGLTYLHSAAVPP 454
+ +T +++E++ N T F L+ T + +R + ++I + L Y HS
Sbjct: 103 DPVSRTPALVFEHV-NNTDFKQLYQTLTD------YDIRFYM-YEILKALDYCHSMG--- 151
Query: 455 IYHRDVKSSNILLD-EKLNAKVSDFGLSRLVERTETNDSHIFTTAQGTMGYLDPEYYRNF 513
I HRDVK N+++D E ++ D+GL+ + + + + PE ++
Sbjct: 152 IMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQE-----YNVRVASRYFKGPELLVDY 206
Query: 514 QLTDKS-DVYSFGVVLLELLTSKKAIDFNREEENVNLVVYMKKIMDEERLMEVVD 567
Q+ D S D++S G +L ++ K+ F +N + +V + K++ E L + +D
Sbjct: 207 QMYDYSLDMWSLGCMLASMIFRKEP--FFHGHDNYDQLVRIAKVLGTEDLYDYID 259
>pdb|3FPM|A Chain A, Crystal Structure Of A Squarate Inhibitor Bound To Mapkap
Kinase-2
Length = 325
Score = 45.8 bits (107), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 36/100 (36%), Positives = 49/100 (49%), Gaps = 11/100 (11%)
Query: 436 IAHQIAEGLTYLHSAAVPPIYHRDVKSSNILLDEKL-NA--KVSDFGLSRLVERTETNDS 492
I I E + YLHS I HRDVK N+L K NA K++DFG ++ ET
Sbjct: 127 IMKSIGEAIQYLHSIN---IAHRDVKPENLLYTSKRPNAILKLTDFGFAK-----ETTSH 178
Query: 493 HIFTTAQGTMGYLDPEYYRNFQLTDKSDVYSFGVVLLELL 532
+ TT T Y+ PE + D++S GV++ LL
Sbjct: 179 NSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILL 218
>pdb|3R2B|A Chain A, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|B Chain B, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|C Chain C, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|D Chain D, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|E Chain E, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|F Chain F, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|G Chain G, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|H Chain H, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|I Chain I, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|J Chain J, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|K Chain K, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|L Chain L, Mk2 Kinase Bound To Compound 5b
Length = 318
Score = 45.8 bits (107), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 36/100 (36%), Positives = 49/100 (49%), Gaps = 11/100 (11%)
Query: 436 IAHQIAEGLTYLHSAAVPPIYHRDVKSSNILLDEKL-NA--KVSDFGLSRLVERTETNDS 492
I I E + YLHS I HRDVK N+L K NA K++DFG ++ ET
Sbjct: 120 IMKSIGEAIQYLHSIN---IAHRDVKPENLLYTSKRPNAILKLTDFGFAK-----ETTSH 171
Query: 493 HIFTTAQGTMGYLDPEYYRNFQLTDKSDVYSFGVVLLELL 532
+ TT T Y+ PE + D++S GV++ LL
Sbjct: 172 NSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILL 211
>pdb|3GOK|A Chain A, Binding Site Mapping Of Protein Ligands
pdb|3GOK|B Chain B, Binding Site Mapping Of Protein Ligands
pdb|3GOK|C Chain C, Binding Site Mapping Of Protein Ligands
pdb|3GOK|D Chain D, Binding Site Mapping Of Protein Ligands
pdb|3GOK|E Chain E, Binding Site Mapping Of Protein Ligands
pdb|3GOK|F Chain F, Binding Site Mapping Of Protein Ligands
pdb|3GOK|G Chain G, Binding Site Mapping Of Protein Ligands
pdb|3GOK|H Chain H, Binding Site Mapping Of Protein Ligands
pdb|3GOK|I Chain I, Binding Site Mapping Of Protein Ligands
pdb|3GOK|J Chain J, Binding Site Mapping Of Protein Ligands
pdb|3GOK|K Chain K, Binding Site Mapping Of Protein Ligands
pdb|3GOK|L Chain L, Binding Site Mapping Of Protein Ligands
Length = 334
Score = 45.8 bits (107), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 36/100 (36%), Positives = 49/100 (49%), Gaps = 11/100 (11%)
Query: 436 IAHQIAEGLTYLHSAAVPPIYHRDVKSSNILLDEKL-NA--KVSDFGLSRLVERTETNDS 492
I I E + YLHS I HRDVK N+L K NA K++DFG ++ ET
Sbjct: 136 IMKSIGEAIQYLHSIN---IAHRDVKPENLLYTSKRPNAILKLTDFGFAK-----ETTSH 187
Query: 493 HIFTTAQGTMGYLDPEYYRNFQLTDKSDVYSFGVVLLELL 532
+ TT T Y+ PE + D++S GV++ LL
Sbjct: 188 NSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILL 227
>pdb|2PZY|A Chain A, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|B Chain B, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|C Chain C, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|D Chain D, Structure Of Mk2 Complexed With Compound 76
pdb|3KC3|A Chain A, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|B Chain B, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|C Chain C, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|D Chain D, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|E Chain E, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|F Chain F, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|G Chain G, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|H Chain H, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|I Chain I, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|J Chain J, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|K Chain K, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|L Chain L, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3A2C|A Chain A, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|B Chain B, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|C Chain C, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|D Chain D, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|E Chain E, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|F Chain F, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|G Chain G, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|H Chain H, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|I Chain I, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|J Chain J, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|K Chain K, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|L Chain L, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
Length = 324
Score = 45.8 bits (107), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 36/100 (36%), Positives = 49/100 (49%), Gaps = 11/100 (11%)
Query: 436 IAHQIAEGLTYLHSAAVPPIYHRDVKSSNILLDEKL-NA--KVSDFGLSRLVERTETNDS 492
I I E + YLHS I HRDVK N+L K NA K++DFG ++ ET
Sbjct: 126 IMKSIGEAIQYLHSIN---IAHRDVKPENLLYTSKRPNAILKLTDFGFAK-----ETTSH 177
Query: 493 HIFTTAQGTMGYLDPEYYRNFQLTDKSDVYSFGVVLLELL 532
+ TT T Y+ PE + D++S GV++ LL
Sbjct: 178 NSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILL 217
>pdb|2JBO|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (Crystal
Form-1, Soaking)
pdb|2JBP|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|B Chain B, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|C Chain C, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|D Chain D, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|E Chain E, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|F Chain F, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|G Chain G, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|H Chain H, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|I Chain I, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|J Chain J, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|K Chain K, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|L Chain L, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
Length = 326
Score = 45.8 bits (107), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 36/100 (36%), Positives = 49/100 (49%), Gaps = 11/100 (11%)
Query: 436 IAHQIAEGLTYLHSAAVPPIYHRDVKSSNILLDEKL-NA--KVSDFGLSRLVERTETNDS 492
I I E + YLHS I HRDVK N+L K NA K++DFG ++ ET
Sbjct: 128 IMKSIGEAIQYLHSIN---IAHRDVKPENLLYTSKRPNAILKLTDFGFAK-----ETTSH 179
Query: 493 HIFTTAQGTMGYLDPEYYRNFQLTDKSDVYSFGVVLLELL 532
+ TT T Y+ PE + D++S GV++ LL
Sbjct: 180 NSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILL 219
>pdb|3U87|A Chain A, Structure Of A Chimeric Construct Of Human Ck2alpha And
Human Ck2alpha' In Complex With A Non-hydrolysable
Atp-analogue
pdb|3U87|B Chain B, Structure Of A Chimeric Construct Of Human Ck2alpha And
Human Ck2alpha' In Complex With A Non-hydrolysable
Atp-analogue
Length = 349
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 41/167 (24%), Positives = 81/167 (48%), Gaps = 20/167 (11%)
Query: 403 MIYEYIPNGTLFDHLHCDFTGKWPPLPWHLRLVIAHQIAEGLTYLHSAAVPPIYHRDVKS 462
+++E++ N T F L+ T + +R + ++I + L Y HS I HRDVK
Sbjct: 111 LVFEHV-NNTDFKQLYQTLTD------YDIRFYM-YEILKALDYCHSMG---IMHRDVKP 159
Query: 463 SNILLD-EKLNAKVSDFGLSRLVERTETNDSHIFTTAQGTMGYLDPEYYRNFQLTDKS-D 520
N+++D E ++ D+GL+ + + + + PE ++Q+ D S D
Sbjct: 160 HNVMIDHEHRKLRLIDWGLAEFYHPGQE-----YNVRVASRYFKGPELLVDYQMYDYSLD 214
Query: 521 VYSFGVVLLELLTSKKAIDFNREEENVNLVVYMKKIMDEERLMEVVD 567
++S G +L ++ K+ F +N + +V + K++ E L + +D
Sbjct: 215 MWSLGCMLASMIFRKEP--FFHGHDNYDQLVRIAKVLGTEDLYDYID 259
>pdb|3R2Y|A Chain A, Mk2 Kinase Bound To Compound 1
pdb|3R30|A Chain A, Mk2 Kinase Bound To Compound 2
Length = 319
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 36/100 (36%), Positives = 49/100 (49%), Gaps = 11/100 (11%)
Query: 436 IAHQIAEGLTYLHSAAVPPIYHRDVKSSNILLDEKL-NA--KVSDFGLSRLVERTETNDS 492
I I E + YLHS I HRDVK N+L K NA K++DFG ++ ET
Sbjct: 121 IMKSIGEAIQYLHSIN---IAHRDVKPENLLYTSKRPNAILKLTDFGFAK-----ETTSH 172
Query: 493 HIFTTAQGTMGYLDPEYYRNFQLTDKSDVYSFGVVLLELL 532
+ TT T Y+ PE + D++S GV++ LL
Sbjct: 173 NSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILL 212
>pdb|1KWP|A Chain A, Crystal Structure Of Mapkap2
pdb|1KWP|B Chain B, Crystal Structure Of Mapkap2
pdb|1NY3|A Chain A, Crystal Structure Of Adp Bound To Map Kap Kinase 2
Length = 400
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 36/100 (36%), Positives = 49/100 (49%), Gaps = 11/100 (11%)
Query: 436 IAHQIAEGLTYLHSAAVPPIYHRDVKSSNILLDEKL-NA--KVSDFGLSRLVERTETNDS 492
I I E + YLHS I HRDVK N+L K NA K++DFG ++ ET
Sbjct: 166 IMKSIGEAIQYLHSIN---IAHRDVKPENLLYTSKRPNAILKLTDFGFAK-----ETTSH 217
Query: 493 HIFTTAQGTMGYLDPEYYRNFQLTDKSDVYSFGVVLLELL 532
+ TT T Y+ PE + D++S GV++ LL
Sbjct: 218 NSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILL 257
>pdb|2OZA|A Chain A, Structure Of P38alpha Complex
Length = 356
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 36/100 (36%), Positives = 49/100 (49%), Gaps = 11/100 (11%)
Query: 436 IAHQIAEGLTYLHSAAVPPIYHRDVKSSNILLDEKL-NA--KVSDFGLSRLVERTETNDS 492
I I E + YLHS I HRDVK N+L K NA K++DFG ++ ET
Sbjct: 122 IMKSIGEAIQYLHSIN---IAHRDVKPENLLYTSKRPNAILKLTDFGFAK-----ETTSH 173
Query: 493 HIFTTAQGTMGYLDPEYYRNFQLTDKSDVYSFGVVLLELL 532
+ TT T Y+ PE + D++S GV++ LL
Sbjct: 174 NSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILL 213
>pdb|2P3G|X Chain X, Crystal Structure Of A Pyrrolopyridine Inhibitor Bound To
Mapkap Kinase-2
pdb|3FYJ|X Chain X, Crystal Structure Of An Optimzied Benzothiophene Inhibitor
Bound To Mapkap Kinase-2 (Mk-2)
pdb|3FYK|X Chain X, Crystal Structure Of A Benzthiophene Lead Bound To Mapkap
Kinase-2 (Mk-2)
Length = 327
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 36/100 (36%), Positives = 49/100 (49%), Gaps = 11/100 (11%)
Query: 436 IAHQIAEGLTYLHSAAVPPIYHRDVKSSNILLDEKL-NA--KVSDFGLSRLVERTETNDS 492
I I E + YLHS I HRDVK N+L K NA K++DFG ++ ET
Sbjct: 122 IMKSIGEAIQYLHSIN---IAHRDVKPENLLYTSKRPNAILKLTDFGFAK-----ETTSH 173
Query: 493 HIFTTAQGTMGYLDPEYYRNFQLTDKSDVYSFGVVLLELL 532
+ TT T Y+ PE + D++S GV++ LL
Sbjct: 174 NSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILL 213
>pdb|2ONL|C Chain C, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
Length = 406
Score = 45.8 bits (107), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 36/100 (36%), Positives = 49/100 (49%), Gaps = 11/100 (11%)
Query: 436 IAHQIAEGLTYLHSAAVPPIYHRDVKSSNILLDEKL-NA--KVSDFGLSRLVERTETNDS 492
I I E + YLHS I HRDVK N+L K NA K++DFG ++ ET
Sbjct: 172 IMKSIGEAIQYLHSIN---IAHRDVKPENLLYTSKRPNAILKLTDFGFAK-----ETTSH 223
Query: 493 HIFTTAQGTMGYLDPEYYRNFQLTDKSDVYSFGVVLLELL 532
+ TT T Y+ PE + D++S GV++ LL
Sbjct: 224 NSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILL 263
>pdb|3JUH|A Chain A, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
pdb|3JUH|B Chain B, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
Length = 335
Score = 45.4 bits (106), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 81/167 (48%), Gaps = 20/167 (11%)
Query: 403 MIYEYIPNGTLFDHLHCDFTGKWPPLPWHLRLVIAHQIAEGLTYLHSAAVPPIYHRDVKS 462
+++E++ N T F L+ T + +R + ++I + L Y HS I HRDVK
Sbjct: 111 LVFEHV-NNTDFKQLYQTLTD------YDIRFYM-YEILKALDYCHSMG---IMHRDVKP 159
Query: 463 SNILLD-EKLNAKVSDFGLSRLVERTETNDSHIFTTAQGTMGYLDPEYYRNFQLTDKS-D 520
N+L+D E ++ D+GL+ + + + + PE ++Q+ D S D
Sbjct: 160 HNVLIDHEHRKLRLIDWGLAEFYHPGQE-----YNVRVASRYFKGPELLVDYQMYDYSLD 214
Query: 521 VYSFGVVLLELLTSKKAIDFNREEENVNLVVYMKKIMDEERLMEVVD 567
++S G +L ++ K+ F +N + +V + K++ E L + +D
Sbjct: 215 MWSLGCMLASMIFRKEP--FFHGHDNYDQLVRIAKVLGTEDLYDYID 259
>pdb|2ZJW|A Chain A, Crystal Structure Of Human Ck2 Alpha Complexed With
Ellagic Acid
pdb|3AMY|A Chain A, Crystal Structure Of Human Ck2 Alpha Complexed With
Apigenin
pdb|3AT2|A Chain A, Crystal Structure Of Ck2alpha
pdb|3AT3|A Chain A, Crystal Structure Of Ck2alpha With Pyradine Derivative
pdb|3AT4|A Chain A, Crystal Structure Of Ck2alpha With Pyradine Derivertive
pdb|3AXW|A Chain A, Crystal Structure Of Human Ck2alpha Complexed With A
Potent Inhibitor
Length = 340
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/167 (24%), Positives = 81/167 (48%), Gaps = 20/167 (11%)
Query: 403 MIYEYIPNGTLFDHLHCDFTGKWPPLPWHLRLVIAHQIAEGLTYLHSAAVPPIYHRDVKS 462
+++E++ N T F L+ T + +R + ++I + L Y HS I HRDVK
Sbjct: 116 LVFEHV-NNTDFKQLYQTLTD------YDIRFYM-YEILKALDYCHSMG---IMHRDVKP 164
Query: 463 SNILLD-EKLNAKVSDFGLSRLVERTETNDSHIFTTAQGTMGYLDPEYYRNFQLTDKS-D 520
N+++D E ++ D+GL+ + + + + PE ++Q+ D S D
Sbjct: 165 HNVMIDHEHRKLRLIDWGLAEFYHPGQE-----YNVRVASRYFKGPELLVDYQMYDYSLD 219
Query: 521 VYSFGVVLLELLTSKKAIDFNREEENVNLVVYMKKIMDEERLMEVVD 567
++S G +L ++ K+ F +N + +V + K++ E L + +D
Sbjct: 220 MWSLGCMLASMIFRKEP--FFHGHDNYDQLVRIAKVLGTEDLYDYID 264
>pdb|3Q9W|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 8.5
pdb|3Q9X|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 6.5
pdb|3Q9X|B Chain B, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 6.5
pdb|3Q9Y|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 8.5
pdb|3Q9Z|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 6.5
pdb|3Q9Z|B Chain B, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 6.5
pdb|3QA0|A Chain A, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
6.5
pdb|3QA0|B Chain B, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
6.5
Length = 336
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/167 (24%), Positives = 81/167 (48%), Gaps = 20/167 (11%)
Query: 403 MIYEYIPNGTLFDHLHCDFTGKWPPLPWHLRLVIAHQIAEGLTYLHSAAVPPIYHRDVKS 462
+++E++ N T F L+ T + +R + ++I + L Y HS I HRDVK
Sbjct: 111 LVFEHV-NNTDFKQLYQTLTD------YDIRFYM-YEILKALDYCHSMG---IMHRDVKP 159
Query: 463 SNILLD-EKLNAKVSDFGLSRLVERTETNDSHIFTTAQGTMGYLDPEYYRNFQLTDKS-D 520
N+++D E ++ D+GL+ + + + + PE ++Q+ D S D
Sbjct: 160 HNVMIDHEHRKLRLIDWGLAEFYHPGQE-----YNVRVASRYFKGPELLVDYQMYDYSLD 214
Query: 521 VYSFGVVLLELLTSKKAIDFNREEENVNLVVYMKKIMDEERLMEVVD 567
++S G +L ++ K+ F +N + +V + K++ E L + +D
Sbjct: 215 MWSLGCMLASMIFRKEP--FFHGHDNYDQLVRIAKVLGTEDLYDYID 259
>pdb|3BQC|A Chain A, High Ph-Value Crystal Structure Of Emodin In Complex With
The Catalytic Subunit Of Protein Kinase Ck2
pdb|3C13|A Chain A, Low Ph-Value Crystal Structure Of Emodin In Complex With
The Catalytic Subunit Of Protein Kinase Ck2
pdb|3FWQ|A Chain A, Inactive Conformation Of Human Protein Kinase Ck2
Catalytic Subunit
pdb|3FWQ|B Chain B, Inactive Conformation Of Human Protein Kinase Ck2
Catalytic Subunit
pdb|3RPS|A Chain A, Structure Of Human Ck2alpha In Complex With The
Atp-Competitive Inhibitor
3-(4,5,6,7-Tetrabromo-1h-Benzotriazol-1-Yl)propan-1-Ol
pdb|3RPS|B Chain B, Structure Of Human Ck2alpha In Complex With The
Atp-Competitive Inhibitor
3-(4,5,6,7-Tetrabromo-1h-Benzotriazol-1-Yl)propan-1-Ol
pdb|3U9C|A Chain A, Structure Of A C-terminal Deletion Mutant Of Human Protein
Kinase Ck2 Catalytic Subunit With The Atp-competitive
Inhibitor Resorufin
pdb|3U9C|B Chain B, Structure Of A C-terminal Deletion Mutant Of Human Protein
Kinase Ck2 Catalytic Subunit With The Atp-competitive
Inhibitor Resorufin
pdb|4FBX|A Chain A, Complex Structure Of Human Protein Kinase Ck2 Catalytic
Subunit Crystallized In The Presence Of A Bisubstrate
Inhibitor
Length = 335
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/167 (24%), Positives = 81/167 (48%), Gaps = 20/167 (11%)
Query: 403 MIYEYIPNGTLFDHLHCDFTGKWPPLPWHLRLVIAHQIAEGLTYLHSAAVPPIYHRDVKS 462
+++E++ N T F L+ T + +R + ++I + L Y HS I HRDVK
Sbjct: 111 LVFEHV-NNTDFKQLYQTLTD------YDIRFYM-YEILKALDYCHSMG---IMHRDVKP 159
Query: 463 SNILLD-EKLNAKVSDFGLSRLVERTETNDSHIFTTAQGTMGYLDPEYYRNFQLTDKS-D 520
N+++D E ++ D+GL+ + + + + PE ++Q+ D S D
Sbjct: 160 HNVMIDHEHRKLRLIDWGLAEFYHPGQE-----YNVRVASRYFKGPELLVDYQMYDYSLD 214
Query: 521 VYSFGVVLLELLTSKKAIDFNREEENVNLVVYMKKIMDEERLMEVVD 567
++S G +L ++ K+ F +N + +V + K++ E L + +D
Sbjct: 215 MWSLGCMLASMIFRKEP--FFHGHDNYDQLVRIAKVLGTEDLYDYID 259
>pdb|3ZUU|A Chain A, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
pdb|3ZUU|B Chain B, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
Length = 362
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 65/232 (28%), Positives = 102/232 (43%), Gaps = 34/232 (14%)
Query: 338 IGTGGFGEVFKGILDDGT--VTAIKRAKLGNTKGTDLVLNEVRILCQVNHRSL-----VR 390
IG+G FG V + + D + + A+K + G K + V E+ +NHRSL VR
Sbjct: 27 IGSGNFG-VARLMRDKQSNELVAVKYIERGE-KIDENVKREI-----INHRSLRHPNIVR 79
Query: 391 LLGCCVELDQTLMIYEYIPNGTLFDHLHCDFTGKWPPLPWHLRLVIAHQIAEGLTYLHSA 450
+ ++ EY G LF+ + C+ G++ Q+ G++Y H+
Sbjct: 80 FKEVILTPTHLAIVMEYASGGELFERI-CN-AGRFSEDEARF---FFQQLISGVSYCHAM 134
Query: 451 AVPPIYHRDVKSSNILLD--EKLNAKVSDFGLSR-LVERTETNDSHIFTTAQGTMGYLDP 507
V HRD+K N LLD K+ FG S+ V ++ D+ GT Y+ P
Sbjct: 135 QV---CHRDLKLENTLLDGSPAPRLKICAFGYSKSSVLHSQPKDT------VGTPAYIAP 185
Query: 508 EYYRNFQLTDK-SDVYSFGVVLLELLTSKKAIDFNREEENVNLVVYMKKIMD 558
E + K +DV+S GV L +L A F EE N + +I++
Sbjct: 186 EVLLKKEYDGKVADVWSCGVTLYVMLVG--AYPFEDPEEPKNFRKTIHRILN 235
>pdb|1JWH|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Holoenzyme
pdb|1JWH|B Chain B, Crystal Structure Of Human Protein Kinase Ck2 Holoenzyme
pdb|3PE1|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Alpha
Subunit In Complex With The Inhibitor Cx-4945
pdb|3PE2|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 In Complex
With The Inhibitor Cx-5011
pdb|3R0T|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Alpha
Subunit In Complex With The Inhibitor Cx-5279
Length = 337
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/167 (24%), Positives = 81/167 (48%), Gaps = 20/167 (11%)
Query: 403 MIYEYIPNGTLFDHLHCDFTGKWPPLPWHLRLVIAHQIAEGLTYLHSAAVPPIYHRDVKS 462
+++E++ N T F L+ T + +R + ++I + L Y HS I HRDVK
Sbjct: 111 LVFEHV-NNTDFKQLYQTLTD------YDIRFYM-YEILKALDYCHSMG---IMHRDVKP 159
Query: 463 SNILLD-EKLNAKVSDFGLSRLVERTETNDSHIFTTAQGTMGYLDPEYYRNFQLTDKS-D 520
N+++D E ++ D+GL+ + + + + PE ++Q+ D S D
Sbjct: 160 HNVMIDHEHRKLRLIDWGLAEFYHPGQE-----YNVRVASRYFKGPELLVDYQMYDYSLD 214
Query: 521 VYSFGVVLLELLTSKKAIDFNREEENVNLVVYMKKIMDEERLMEVVD 567
++S G +L ++ K+ F +N + +V + K++ E L + +D
Sbjct: 215 MWSLGCMLASMIFRKEP--FFHGHDNYDQLVRIAKVLGTEDLYDYID 259
>pdb|3H30|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2 With 5,6-Dichloro-1-Beta-D-
Ribofuranosylbenzimidazole
pdb|3H30|B Chain B, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2 With 5,6-Dichloro-1-Beta-D-
Ribofuranosylbenzimidazole
Length = 334
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/167 (24%), Positives = 81/167 (48%), Gaps = 20/167 (11%)
Query: 403 MIYEYIPNGTLFDHLHCDFTGKWPPLPWHLRLVIAHQIAEGLTYLHSAAVPPIYHRDVKS 462
+++E++ N T F L+ T + +R + ++I + L Y HS I HRDVK
Sbjct: 111 LVFEHV-NNTDFKQLYQTLTD------YDIRFYM-YEILKALDYCHSMG---IMHRDVKP 159
Query: 463 SNILLD-EKLNAKVSDFGLSRLVERTETNDSHIFTTAQGTMGYLDPEYYRNFQLTDKS-D 520
N+++D E ++ D+GL+ + + + + PE ++Q+ D S D
Sbjct: 160 HNVMIDHEHRKLRLIDWGLAEFYHPGQE-----YNVRVASRYFKGPELLVDYQMYDYSLD 214
Query: 521 VYSFGVVLLELLTSKKAIDFNREEENVNLVVYMKKIMDEERLMEVVD 567
++S G +L ++ K+ F +N + +V + K++ E L + +D
Sbjct: 215 MWSLGCMLASMIFRKEP--FFHGHDNYDQLVRIAKVLGTEDLYDYID 259
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.320 0.137 0.421
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 17,681,493
Number of Sequences: 62578
Number of extensions: 750864
Number of successful extensions: 4346
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 841
Number of HSP's successfully gapped in prelim test: 245
Number of HSP's that attempted gapping in prelim test: 1724
Number of HSP's gapped (non-prelim): 1145
length of query: 624
length of database: 14,973,337
effective HSP length: 105
effective length of query: 519
effective length of database: 8,402,647
effective search space: 4360973793
effective search space used: 4360973793
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 54 (25.4 bits)