BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 039682
(107 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q2HJ98|FAHD1_BOVIN Acylpyruvase FAHD1, mitochondrial OS=Bos taurus GN=FAHD1 PE=2 SV=1
Length = 221
Score = 120 bits (300), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 56/104 (53%), Positives = 75/104 (72%), Gaps = 3/104 (2%)
Query: 1 AKGQDTFTPISSVLPKSAVPDPYNFELWLKVDREIRQQGSTKDMIFKIPYLISHISSIMT 60
AK P+S+ +PK +PDP+N +LWLKV+ E+RQ+G T MIF IPY+IS++S IMT
Sbjct: 119 AKSFTASCPVSAFVPKEKIPDPHNLKLWLKVNGELRQEGETSSMIFSIPYIISYVSKIMT 178
Query: 61 LFEGDVILTGSPQGVGPVKAGQKTTAGIAGLLVVRFDNKKRRRP 104
L EGD+ILTG+P+GVGPVK + AGI G+L ++F K RP
Sbjct: 179 LEEGDIILTGTPKGVGPVKENDEIQAGIHGVLSMKF---KVERP 219
>sp|Q5RDW0|FAHD1_PONAB Acylpyruvase FAHD1, mitochondrial OS=Pongo abelii GN=FAHD1 PE=2
SV=1
Length = 224
Score = 117 bits (293), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 53/100 (53%), Positives = 73/100 (73%)
Query: 1 AKGQDTFTPISSVLPKSAVPDPYNFELWLKVDREIRQQGSTKDMIFKIPYLISHISSIMT 60
AK P+S+ +PK +PDP+ +LWLKV+ E+RQ+G T MIF IPY+IS++S I+T
Sbjct: 122 AKSFTASCPVSAFVPKEKIPDPHKLKLWLKVNGELRQEGETSSMIFSIPYIISYVSKIIT 181
Query: 61 LFEGDVILTGSPQGVGPVKAGQKTTAGIAGLLVVRFDNKK 100
L EGD+ILTG+P+GVGPVK + AGI GL+ +RF +K
Sbjct: 182 LEEGDIILTGTPKGVGPVKENDEIEAGIHGLVSMRFKVEK 221
>sp|Q8R0F8|FAHD1_MOUSE Acylpyruvase FAHD1, mitochondrial OS=Mus musculus GN=Fahd1 PE=1
SV=2
Length = 227
Score = 114 bits (286), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 51/100 (51%), Positives = 73/100 (73%)
Query: 1 AKGQDTFTPISSVLPKSAVPDPYNFELWLKVDREIRQQGSTKDMIFKIPYLISHISSIMT 60
AK + P+S+ +PK +PDP+ LWLKV+ E+RQ+G T MIF IPY+IS++S I+T
Sbjct: 125 AKSFTSSCPVSAFVPKEKIPDPHALRLWLKVNGELRQEGKTSSMIFSIPYIISYVSKIIT 184
Query: 61 LFEGDVILTGSPQGVGPVKAGQKTTAGIAGLLVVRFDNKK 100
L EGD+ILTG+P+GVGP+K + AGI G++ +RF K+
Sbjct: 185 LEEGDLILTGTPKGVGPIKENDEIEAGIDGVVSMRFKVKR 224
>sp|Q6P587|FAHD1_HUMAN Acylpyruvase FAHD1, mitochondrial OS=Homo sapiens GN=FAHD1 PE=1
SV=2
Length = 224
Score = 114 bits (286), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 52/100 (52%), Positives = 72/100 (72%)
Query: 1 AKGQDTFTPISSVLPKSAVPDPYNFELWLKVDREIRQQGSTKDMIFKIPYLISHISSIMT 60
AK P+S+ +PK +PDP+ +LWLKV+ E+RQ+G T MIF IPY+IS++S I+T
Sbjct: 122 AKSFTASCPVSAFVPKEKIPDPHKLKLWLKVNGELRQEGETSSMIFSIPYIISYVSKIIT 181
Query: 61 LFEGDVILTGSPQGVGPVKAGQKTTAGIAGLLVVRFDNKK 100
L EGD+ILTG+P+GVGPVK + AGI GL+ + F +K
Sbjct: 182 LEEGDIILTGTPKGVGPVKENDEIEAGIHGLVSMTFKVEK 221
>sp|Q86I22|FAHD1_DICDI Acylpyruvase FAHD1, mitochondrial OS=Dictyostelium discoideum
GN=fahd1 PE=3 SV=1
Length = 218
Score = 114 bits (284), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 57/104 (54%), Positives = 72/104 (69%), Gaps = 1/104 (0%)
Query: 1 AKGQDTFTPISSVLPKSAVPDPYNFELWLKVDREIRQQGSTKDMIFKIPYLISHISSIMT 60
+KG DTF PIS +PK + D N ELW VD +I+Q+G+T MIF +P+LI +ISSIMT
Sbjct: 114 SKGYDTFCPISGFIPKDKIKDLNNVELWCSVDGQIKQKGNTNQMIFDVPHLIQYISSIMT 173
Query: 61 LFEGDVILTGSPQGVGPVKAGQKTTAGIAGLLV-VRFDNKKRRR 103
L GD+ILTG+P GVGPVK GQ GI GL ++FD R+R
Sbjct: 174 LESGDLILTGTPSGVGPVKPGQVIKCGITGLDTDMQFDIILRKR 217
>sp|Q6AYQ8|FAHD1_RAT Acylpyruvase FAHD1, mitochondrial OS=Rattus norvegicus GN=Fahd1
PE=2 SV=1
Length = 221
Score = 111 bits (277), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 50/102 (49%), Positives = 73/102 (71%)
Query: 1 AKGQDTFTPISSVLPKSAVPDPYNFELWLKVDREIRQQGSTKDMIFKIPYLISHISSIMT 60
AK + P+S+ +PK +PDP+ LWLKV+ E+RQ+G T MIF IPY+IS++S I+T
Sbjct: 119 AKSFTSSCPVSAFVPKEKIPDPHALRLWLKVNGELRQEGKTSSMIFSIPYIISYVSKIIT 178
Query: 61 LFEGDVILTGSPQGVGPVKAGQKTTAGIAGLLVVRFDNKKRR 102
L EGD+ILTG+P+GVG VK + AGI G++ +RF ++ +
Sbjct: 179 LEEGDLILTGTPKGVGAVKENDEIEAGIDGVVSMRFKVERSK 220
>sp|O58377|Y643_PYRHO Uncharacterized protein PH0643 OS=Pyrococcus horikoshii (strain
ATCC 700860 / DSM 12428 / JCM 9974 / NBRC 100139 / OT-3)
GN=PH0643 PE=3 SV=1
Length = 230
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 49/97 (50%), Positives = 63/97 (64%)
Query: 1 AKGQDTFTPISSVLPKSAVPDPYNFELWLKVDREIRQQGSTKDMIFKIPYLISHISSIMT 60
+KG DTF PI + S DP + E+ LKV+ +IRQ G T MIFKIP LI +IS IMT
Sbjct: 125 SKGFDTFAPIGPRVVDSRELDPSDLEIGLKVNGKIRQLGRTSQMIFKIPELIEYISHIMT 184
Query: 61 LFEGDVILTGSPQGVGPVKAGQKTTAGIAGLLVVRFD 97
L GD+I TG+P GVGP++ G + A I G+ + FD
Sbjct: 185 LEPGDIIATGTPPGVGPLRHGDRIEAWIEGIGKMEFD 221
>sp|Q9UYW0|Y1397_PYRAB Uncharacterized protein PYRAB13970 OS=Pyrococcus abyssi (strain GE5
/ Orsay) GN=PYRAB13970 PE=3 SV=1
Length = 225
Score = 90.1 bits (222), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 47/95 (49%), Positives = 63/95 (66%)
Query: 1 AKGQDTFTPISSVLPKSAVPDPYNFELWLKVDREIRQQGSTKDMIFKIPYLISHISSIMT 60
+KG DTF PI + DP + E+ LKV+ ++RQ G T +MIFKIP LI +ISSIMT
Sbjct: 120 SKGFDTFAPIGPRIVDKRELDPSDLEIGLKVNGKVRQLGRTSEMIFKIPELIEYISSIMT 179
Query: 61 LFEGDVILTGSPQGVGPVKAGQKTTAGIAGLLVVR 95
L GD+I TG+P GVGP++ G K A + G+ V+
Sbjct: 180 LEPGDIIATGTPPGVGPLRHGDKIEAWVEGIGVLE 214
>sp|P37352|HPCE_ECOLX Homoprotocatechuate catabolism bifunctional isomerase/decarboxylase
OS=Escherichia coli GN=hpcE PE=1 SV=2
Length = 427
Score = 82.8 bits (203), Expect = 5e-16, Method: Composition-based stats.
Identities = 37/75 (49%), Positives = 57/75 (76%), Gaps = 1/75 (1%)
Query: 2 KGQDTFTP-ISSVLPKSAVPDPYNFELWLKVDREIRQQGSTKDMIFKIPYLISHISSIMT 60
K +D TP +S+++PK A+PDP+N L V+ E+RQQG+T D+IF +P+LI+++S MT
Sbjct: 325 KSRDGLTPMLSTIVPKEAIPDPHNLTLRTFVNGELRQQGTTADLIFSVPFLIAYLSEFMT 384
Query: 61 LFEGDVILTGSPQGV 75
L GD+I TG+P+G+
Sbjct: 385 LNPGDMIATGTPKGL 399
Score = 36.6 bits (83), Expect = 0.047, Method: Composition-based stats.
Identities = 24/83 (28%), Positives = 39/83 (46%), Gaps = 3/83 (3%)
Query: 1 AKGQDTFTPISSVLPKSAVPDPYNFELWLKVDREIRQQGSTKDMIFKIPYLISHISSIMT 60
AK +D F PI + S V N ++ +++ +T D+ L+S +S T
Sbjct: 109 AKCRDGFCPIGETVALSNVD---NLTIYTEINGRPADHWNTSDLQRNAAQLLSALSEFAT 165
Query: 61 LFEGDVILTGSPQGVGPVKAGQK 83
L GD IL G+PQ ++ G +
Sbjct: 166 LNPGDAILLGTPQARVEIQPGDR 188
>sp|Q46978|HPAG_ECOLX 4-hydroxyphenylacetate degradation bifunctional
isomerase/decarboxylase OS=Escherichia coli GN=hpaG PE=3
SV=1
Length = 429
Score = 82.8 bits (203), Expect = 5e-16, Method: Composition-based stats.
Identities = 37/75 (49%), Positives = 57/75 (76%), Gaps = 1/75 (1%)
Query: 2 KGQDTFTP-ISSVLPKSAVPDPYNFELWLKVDREIRQQGSTKDMIFKIPYLISHISSIMT 60
K +D TP +S+++PK A+PDP+N L V+ E+RQQG+T D+IF +P+LI+++S MT
Sbjct: 325 KSRDGLTPMLSTIVPKEAIPDPHNLTLRTFVNGELRQQGTTADLIFSVPFLIAYLSEFMT 384
Query: 61 LFEGDVILTGSPQGV 75
L GD+I TG+P+G+
Sbjct: 385 LNPGDMIATGTPKGL 399
Score = 36.6 bits (83), Expect = 0.054, Method: Composition-based stats.
Identities = 24/83 (28%), Positives = 39/83 (46%), Gaps = 3/83 (3%)
Query: 1 AKGQDTFTPISSVLPKSAVPDPYNFELWLKVDREIRQQGSTKDMIFKIPYLISHISSIMT 60
AK +D F PI + S V N ++ +++ +T D+ L+S +S T
Sbjct: 109 AKCRDGFCPIGETVALSNVD---NLTIYTEINGRPADHWNTADLQRNAAQLLSALSEFAT 165
Query: 61 LFEGDVILTGSPQGVGPVKAGQK 83
L GD IL G+PQ ++ G +
Sbjct: 166 LNPGDAILLGTPQARVEIQPGDR 188
>sp|A9ALD1|UGL_BURM1 Ureidoglycolate lyase OS=Burkholderia multivorans (strain ATCC
17616 / 249) GN=Bmul_3283 PE=3 SV=1
Length = 282
Score = 82.4 bits (202), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 49/100 (49%), Positives = 61/100 (61%), Gaps = 9/100 (9%)
Query: 1 AKGQDTFTPISSVL-PKSAVPDPYNFELWLKVDREIRQQGSTKDMIFKIPYLISHISSIM 59
KG DTF PI L + VPDP + +LWL+VD Q G+T+ M+F + LI+++SS M
Sbjct: 172 GKGFDTFGPIGPWLVTRDEVPDPQSLDLWLEVDGHRYQNGNTRTMVFTVAQLIAYLSSCM 231
Query: 60 TLFEGDVILTGSPQGVG------PV--KAGQKTTAGIAGL 91
TL GDVI TG+P GVG PV KAGQ GI GL
Sbjct: 232 TLQPGDVITTGTPPGVGMGIKPAPVYLKAGQMVRLGIEGL 271
>sp|Q9P7L4|YOS9_SCHPO Uncharacterized hydrolase C21C3.09c OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=SPBC21C3.09c PE=3 SV=1
Length = 221
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 39/86 (45%), Positives = 58/86 (67%)
Query: 1 AKGQDTFTPISSVLPKSAVPDPYNFELWLKVDREIRQQGSTKDMIFKIPYLISHISSIMT 60
AKG DTF P+ ++PK +PDP+N L L ++ ++ Q+ ST M+ KIP + S I+ M+
Sbjct: 113 AKGYDTFLPVGPIIPKHLIPDPHNVILELSLNGKVVQKDSTSLMLNKIPKIFSSITEAMS 172
Query: 61 LFEGDVILTGSPQGVGPVKAGQKTTA 86
L GD++LTG+P+GVGPV G +A
Sbjct: 173 LNPGDLVLTGTPKGVGPVVPGDILSA 198
>sp|Q39BA7|UGL_BURS3 Ureidoglycolate lyase OS=Burkholderia sp. (strain 383)
GN=Bcep18194_B0137 PE=1 SV=1
Length = 282
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 47/100 (47%), Positives = 60/100 (60%), Gaps = 9/100 (9%)
Query: 1 AKGQDTFTPISSVL-PKSAVPDPYNFELWLKVDREIRQQGSTKDMIFKIPYLISHISSIM 59
KG DTF PI L + VPDP +LWL++D Q G+T+ M+F + LI+++SS M
Sbjct: 172 GKGFDTFGPIGPWLVTRDEVPDPQRLDLWLEIDGHRYQNGNTRTMVFTVAQLIAYLSSCM 231
Query: 60 TLFEGDVILTGSPQGVG------PV--KAGQKTTAGIAGL 91
TL GDVI TG+P GVG PV KAGQ G+ GL
Sbjct: 232 TLQPGDVITTGTPPGVGMGIKPSPVFLKAGQMVRLGVEGL 271
>sp|Q59050|Y1656_METJA Uncharacterized protein MJ1656 OS=Methanocaldococcus jannaschii
(strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC
100440) GN=MJ1656 PE=3 SV=1
Length = 237
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 41/95 (43%), Positives = 60/95 (63%), Gaps = 2/95 (2%)
Query: 1 AKGQDTFTPISSVLPKSAVPDPYNFELWLKVDREIRQQGSTKDMIFKIPYLISHISSIMT 60
AK DTF PI + K DP N + +V+ EI+Q+ +TK+MIF + L+ ++SIMT
Sbjct: 138 AKSFDTFCPIGPRIVKDI--DPMNLNIECRVNGEIKQKSNTKNMIFDVYELVEFVASIMT 195
Query: 61 LFEGDVILTGSPQGVGPVKAGQKTTAGIAGLLVVR 95
L+ GD+I TG+P GVG +KAG I G+ ++R
Sbjct: 196 LYPGDIISTGTPPGVGELKAGDVVECEIEGIGILR 230
>sp|Q9RPU5|HPAG_SALDU 4-hydroxyphenylacetate degradation bifunctional
isomerase/decarboxylase OS=Salmonella dublin GN=hpaG
PE=3 SV=1
Length = 429
Score = 80.5 bits (197), Expect = 3e-15, Method: Composition-based stats.
Identities = 41/91 (45%), Positives = 59/91 (64%), Gaps = 1/91 (1%)
Query: 2 KGQDTFTPISS-VLPKSAVPDPYNFELWLKVDREIRQQGSTKDMIFKIPYLISHISSIMT 60
K +D TPI ++ K AV DP+N L V+ E+RQ+G+T D+IF IP+LIS++S MT
Sbjct: 325 KSRDGLTPIGPWIVDKEAVSDPHNLTLRTFVNGELRQEGTTADLIFSIPFLISYLSEFMT 384
Query: 61 LFEGDVILTGSPQGVGPVKAGQKTTAGIAGL 91
L GD+I TG+P+G+ V G + I G+
Sbjct: 385 LQPGDMIATGTPKGLSDVVPGDEVVLEIKGV 415
Score = 36.2 bits (82), Expect = 0.058, Method: Composition-based stats.
Identities = 26/91 (28%), Positives = 41/91 (45%), Gaps = 3/91 (3%)
Query: 1 AKGQDTFTPISSVLPKSAVPDPYNFELWLKVDREIRQQGSTKDMIFKIPYLISHISSIMT 60
AK +D F P+ + P S V N + +++ +T D+ L+S +S T
Sbjct: 109 AKCRDGFCPLGEMAPLSDVD---NLTIITEINGREADHWNTADLQRSAAQLLSALSEFAT 165
Query: 61 LFEGDVILTGSPQGVGPVKAGQKTTAGIAGL 91
L GD IL G+PQ ++ G + GL
Sbjct: 166 LNPGDAILLGTPQNRVALRPGDRVRILAKGL 196
>sp|Q0B628|UGL_BURCM Ureidoglycolate lyase OS=Burkholderia ambifaria (strain ATCC
BAA-244 / AMMD) GN=Bamb_4846 PE=3 SV=1
Length = 282
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 47/100 (47%), Positives = 60/100 (60%), Gaps = 9/100 (9%)
Query: 1 AKGQDTFTPISSVL-PKSAVPDPYNFELWLKVDREIRQQGSTKDMIFKIPYLISHISSIM 59
KG DTF PI L + VPDP +LWL+VD Q G+T+ M+F + L++++S+ M
Sbjct: 172 GKGFDTFGPIGPWLVTRDEVPDPQRLDLWLEVDGHRYQNGNTRTMVFTVAQLVAYLSTCM 231
Query: 60 TLFEGDVILTGSPQGVG------PV--KAGQKTTAGIAGL 91
TL GDVI TG+P GVG PV KAGQ GI GL
Sbjct: 232 TLQPGDVITTGTPPGVGMGIKPSPVFLKAGQTVRLGIDGL 271
>sp|A0B3M8|UGL_BURCH Ureidoglycolate lyase OS=Burkholderia cenocepacia (strain HI2424)
GN=Bcen2424_5521 PE=3 SV=1
Length = 282
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 46/100 (46%), Positives = 60/100 (60%), Gaps = 9/100 (9%)
Query: 1 AKGQDTFTPISSVL-PKSAVPDPYNFELWLKVDREIRQQGSTKDMIFKIPYLISHISSIM 59
KG DTF PI L + VPDP +LWL++D Q G+T+ M+F + L++++S+ M
Sbjct: 172 GKGFDTFGPIGPWLVTRDEVPDPQRLDLWLEIDGHRYQNGNTRTMVFTVAQLVAYLSTCM 231
Query: 60 TLFEGDVILTGSPQGVG------PV--KAGQKTTAGIAGL 91
TL GDVI TG+P GVG PV KAGQ GI GL
Sbjct: 232 TLQPGDVITTGTPPGVGMGVKPSPVFLKAGQTVRLGIEGL 271
>sp|Q1BJJ1|UGL_BURCA Ureidoglycolate lyase OS=Burkholderia cenocepacia (strain AU 1054)
GN=Bcen_5340 PE=3 SV=1
Length = 282
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 46/100 (46%), Positives = 60/100 (60%), Gaps = 9/100 (9%)
Query: 1 AKGQDTFTPISSVL-PKSAVPDPYNFELWLKVDREIRQQGSTKDMIFKIPYLISHISSIM 59
KG DTF PI L + VPDP +LWL++D Q G+T+ M+F + L++++S+ M
Sbjct: 172 GKGFDTFGPIGPWLVTRDEVPDPQRLDLWLEIDGHRYQNGNTRTMVFTVAQLVAYLSTCM 231
Query: 60 TLFEGDVILTGSPQGVG------PV--KAGQKTTAGIAGL 91
TL GDVI TG+P GVG PV KAGQ GI GL
Sbjct: 232 TLQPGDVITTGTPPGVGMGVKPSPVFLKAGQTVRLGIEGL 271
>sp|B1K3Y3|UGL_BURCC Ureidoglycolate lyase OS=Burkholderia cenocepacia (strain MC0-3)
GN=Bcenmc03_4750 PE=3 SV=1
Length = 282
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 46/100 (46%), Positives = 60/100 (60%), Gaps = 9/100 (9%)
Query: 1 AKGQDTFTPISSVL-PKSAVPDPYNFELWLKVDREIRQQGSTKDMIFKIPYLISHISSIM 59
KG DTF PI L + VPDP +LWL++D Q G+T+ M+F + L++++S+ M
Sbjct: 172 GKGFDTFGPIGPWLVTRDEVPDPQRLDLWLEIDGHRYQNGNTRTMVFTVAQLVAYLSTCM 231
Query: 60 TLFEGDVILTGSPQGVG------PV--KAGQKTTAGIAGL 91
TL GDVI TG+P GVG PV KAGQ GI GL
Sbjct: 232 TLQPGDVITTGTPPGVGMGVKPSPVFLKAGQTVRLGIEGL 271
>sp|B4EKX6|UGL_BURCJ Ureidoglycolate lyase OS=Burkholderia cepacia (strain J2315 / LMG
16656) GN=BceJ2315_61450 PE=3 SV=1
Length = 282
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 47/100 (47%), Positives = 60/100 (60%), Gaps = 9/100 (9%)
Query: 1 AKGQDTFTPISSVL-PKSAVPDPYNFELWLKVDREIRQQGSTKDMIFKIPYLISHISSIM 59
KG DTF PI L + VPDP +LWL++D Q G+T+ M+F + LI+++S+ M
Sbjct: 172 GKGFDTFGPIGPWLVTRDEVPDPQRLDLWLEIDGHRYQNGNTRTMVFTVAQLIAYLSTCM 231
Query: 60 TLFEGDVILTGSPQGVG------PV--KAGQKTTAGIAGL 91
TL GDVI TG+P GVG PV KAGQ GI GL
Sbjct: 232 TLQPGDVITTGTPPGVGMGIKPSPVFLKAGQMVRLGIDGL 271
>sp|B1Z1Y2|UGL_BURA4 Ureidoglycolate lyase OS=Burkholderia ambifaria (strain MC40-6)
GN=BamMC406_5393 PE=3 SV=1
Length = 282
Score = 79.0 bits (193), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 46/100 (46%), Positives = 60/100 (60%), Gaps = 9/100 (9%)
Query: 1 AKGQDTFTPISSVL-PKSAVPDPYNFELWLKVDREIRQQGSTKDMIFKIPYLISHISSIM 59
KG DTF PI L + VPDP +LWL++D Q G+T+ M+F + L++++S+ M
Sbjct: 172 GKGFDTFGPIGPWLVTRDEVPDPQRVDLWLEIDGHRYQNGNTRTMVFTVAQLVAYLSTCM 231
Query: 60 TLFEGDVILTGSPQGVG------PV--KAGQKTTAGIAGL 91
TL GDVI TG+P GVG PV KAGQ GI GL
Sbjct: 232 TLQPGDVITTGTPPGVGMGIKPSPVFLKAGQTVRLGIDGL 271
>sp|P76004|YCGM_ECOLI Uncharacterized protein YcgM OS=Escherichia coli (strain K12)
GN=ycgM PE=1 SV=1
Length = 219
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 42/91 (46%), Positives = 56/91 (61%), Gaps = 1/91 (1%)
Query: 1 AKGQDTFTPISSVLPKSAVP-DPYNFELWLKVDREIRQQGSTKDMIFKIPYLISHISSIM 59
AK D P+S +P + DP N L L V+ E RQQG+T DMI KI LI+++S
Sbjct: 121 AKAFDNSCPLSGFIPAAEFTGDPQNTTLSLSVNGEQRQQGTTADMIHKIVPLIAYMSKFF 180
Query: 60 TLFEGDVILTGSPQGVGPVKAGQKTTAGIAG 90
TL GDV+LTG+P GVGP+++G + T G
Sbjct: 181 TLKAGDVVLTGTPDGVGPLQSGDELTVTFDG 211
>sp|P34673|YO23_CAEEL Uncharacterized protein ZK688.3 OS=Caenorhabditis elegans
GN=ZK688.3 PE=3 SV=1
Length = 214
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 36/97 (37%), Positives = 56/97 (57%)
Query: 1 AKGQDTFTPISSVLPKSAVPDPYNFELWLKVDREIRQQGSTKDMIFKIPYLISHISSIMT 60
AK D PI LP S +P+P++ EL+ K++ + +Q+ T MIF IP L+ + + T
Sbjct: 116 AKSFDGSCPIGGFLPVSDIPNPHDVELFCKINGKDQQRCRTDVMIFDIPTLLEYTTQFFT 175
Query: 61 LFEGDVILTGSPQGVGPVKAGQKTTAGIAGLLVVRFD 97
L GDV+LTG+P GV + +G G+ L +F+
Sbjct: 176 LEVGDVVLTGTPAGVTKINSGDVIEFGLTDKLNSKFN 212
>sp|Q3TC72|FAHD2_MOUSE Fumarylacetoacetate hydrolase domain-containing protein 2A OS=Mus
musculus GN=Fahd2 PE=1 SV=1
Length = 313
Score = 69.7 bits (169), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 50/73 (68%), Gaps = 1/73 (1%)
Query: 5 DTFTPIS-SVLPKSAVPDPYNFELWLKVDREIRQQGSTKDMIFKIPYLISHISSIMTLFE 63
DTF P+ +++ K + DP+N ++ +V+ E+ Q +T M+FK YLI+ +S +TL+
Sbjct: 211 DTFCPLGPALVTKDTIADPHNLKICCRVNGEVVQSSNTNQMVFKTEYLIAWVSQFVTLYP 270
Query: 64 GDVILTGSPQGVG 76
GD++LTG+P GVG
Sbjct: 271 GDLLLTGTPPGVG 283
>sp|Q96GK7|FAH2A_HUMAN Fumarylacetoacetate hydrolase domain-containing protein 2A OS=Homo
sapiens GN=FAHD2A PE=1 SV=1
Length = 314
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 32/73 (43%), Positives = 50/73 (68%), Gaps = 1/73 (1%)
Query: 5 DTFTPIS-SVLPKSAVPDPYNFELWLKVDREIRQQGSTKDMIFKIPYLISHISSIMTLFE 63
DTF P+ +++ K +V DP+N ++ +V+ E+ Q G+T M+FK LI+ +S +T +
Sbjct: 212 DTFCPLGPALVTKDSVADPHNLKICCRVNGEVVQSGNTNQMVFKTEDLIAWVSQFVTFYP 271
Query: 64 GDVILTGSPQGVG 76
GDVILTG+P GVG
Sbjct: 272 GDVILTGTPPGVG 284
>sp|Q2KIB0|FAHD2_BOVIN Fumarylacetoacetate hydrolase domain-containing protein 2 OS=Bos
taurus GN=FAHD2 PE=2 SV=1
Length = 314
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 31/73 (42%), Positives = 50/73 (68%), Gaps = 1/73 (1%)
Query: 5 DTFTPIS-SVLPKSAVPDPYNFELWLKVDREIRQQGSTKDMIFKIPYLISHISSIMTLFE 63
DTF P+ +++ K +V DP+N ++ +V+ E+ Q +T M+FK LI+ +S +TL+
Sbjct: 212 DTFCPLGPALVTKDSVADPHNLKICCRVNGELMQSSNTNQMVFKTEELITWVSQFVTLYP 271
Query: 64 GDVILTGSPQGVG 76
GD+ILTG+P GVG
Sbjct: 272 GDIILTGTPPGVG 284
>sp|O06724|YISK_BACSU Uncharacterized protein YisK OS=Bacillus subtilis (strain 168)
GN=yisK PE=2 SV=1
Length = 301
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 36/77 (46%), Positives = 48/77 (62%), Gaps = 1/77 (1%)
Query: 1 AKGQDTFTPISSVL-PKSAVPDPYNFELWLKVDREIRQQGSTKDMIFKIPYLISHISSIM 59
K DT P+ VL KS++ +P ++ +V+ E+RQ GS DMIF IP LI +S M
Sbjct: 195 GKSLDTTCPMGPVLVHKSSIQEPERLKVETRVNGELRQSGSASDMIFSIPELIETLSKGM 254
Query: 60 TLFEGDVILTGSPQGVG 76
TL GD+I TG+P GVG
Sbjct: 255 TLEAGDIIATGTPSGVG 271
>sp|Q6P2I3|FAH2B_HUMAN Fumarylacetoacetate hydrolase domain-containing protein 2B OS=Homo
sapiens GN=FAHD2B PE=2 SV=1
Length = 314
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 31/73 (42%), Positives = 49/73 (67%), Gaps = 1/73 (1%)
Query: 5 DTFTPIS-SVLPKSAVPDPYNFELWLKVDREIRQQGSTKDMIFKIPYLISHISSIMTLFE 63
DTF P+ +++ K +V DP+N ++ +V+ E+ Q +T M+FK LI+ +S +T +
Sbjct: 212 DTFCPLGPALVTKDSVADPHNLKICCRVNGEVVQSSNTNQMVFKTEDLIAWVSQFVTFYP 271
Query: 64 GDVILTGSPQGVG 76
GDVILTG+P GVG
Sbjct: 272 GDVILTGTPPGVG 284
>sp|Q5RCX5|FAHD2_PONAB Fumarylacetoacetate hydrolase domain-containing protein 2 OS=Pongo
abelii GN=FAHD2 PE=2 SV=1
Length = 314
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 31/73 (42%), Positives = 49/73 (67%), Gaps = 1/73 (1%)
Query: 5 DTFTPIS-SVLPKSAVPDPYNFELWLKVDREIRQQGSTKDMIFKIPYLISHISSIMTLFE 63
DTF P+ +++ K +V DP+N ++ +V+ E+ Q +T M+FK LI+ +S +T +
Sbjct: 212 DTFCPLGPALVTKDSVADPHNLKICCRVNGELVQSSNTNQMVFKTEDLIAWVSQFVTFYP 271
Query: 64 GDVILTGSPQGVG 76
GDVILTG+P GVG
Sbjct: 272 GDVILTGTPPGVG 284
>sp|B2RYW9|FAHD2_RAT Fumarylacetoacetate hydrolase domain-containing protein 2 OS=Rattus
norvegicus GN=Fahd2 PE=1 SV=1
Length = 313
Score = 65.9 bits (159), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 49/73 (67%), Gaps = 1/73 (1%)
Query: 5 DTFTPIS-SVLPKSAVPDPYNFELWLKVDREIRQQGSTKDMIFKIPYLISHISSIMTLFE 63
DTF P+ +++ K + DP+N ++ +V+ EI Q +T M+FK LI+ +S +TL+
Sbjct: 211 DTFCPLGPALVTKDTIADPHNLKISCRVNGEIVQSSNTNQMVFKTEDLIAWVSQFVTLYP 270
Query: 64 GDVILTGSPQGVG 76
GD++LTG+P GVG
Sbjct: 271 GDILLTGTPPGVG 283
>sp|O28058|Y2225_ARCFU Uncharacterized protein AF_2225 OS=Archaeoglobus fulgidus (strain
ATCC 49558 / VC-16 / DSM 4304 / JCM 9628 / NBRC 100126)
GN=AF_2225 PE=3 SV=1
Length = 250
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 34/95 (35%), Positives = 56/95 (58%), Gaps = 2/95 (2%)
Query: 1 AKGQDTFTPISSVLPKSAVPDPYNFELWLKVDREIRQQGSTKDMIFKIPYLISHISSIMT 60
AK DTF P+ + + + DP + +V+ ++ Q+ +T ++IF + L+S +SS+MT
Sbjct: 144 AKSFDTFAPLGPYI--AEIDDPSKLGIQTRVNGKVVQKSNTSNLIFDVFQLVSFVSSVMT 201
Query: 61 LFEGDVILTGSPQGVGPVKAGQKTTAGIAGLLVVR 95
L GDVI TG+P GVG +K G I + ++R
Sbjct: 202 LKAGDVIATGTPAGVGMLKDGDVVEVEIEKIGILR 236
>sp|P53889|FMP41_YEAST Uncharacterized mitochondrial hydrolase FMP41 OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=FMP41 PE=1
SV=1
Length = 259
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/114 (33%), Positives = 63/114 (55%), Gaps = 11/114 (9%)
Query: 1 AKGQDTFTPISSVLP-------KSAVPDPYNFELWLKVDREIRQQGSTKDMIFKIPYLIS 53
+KG DTF PIS+++ KS + D F + V+ ++RQ G T M+ + ++
Sbjct: 141 SKGFDTFMPISAIVSREKFSSYKSNLQDI--FRVKCSVNGQLRQDGGTNLMLHPLHKILQ 198
Query: 54 HISSIMTLFEGDVILTGSPQGVGPVKAGQKTTAGI--AGLLVVRFDNKKRRRPG 105
HIS++++L GD+ILTG+P GVG +K G + + +V + + RPG
Sbjct: 199 HISTMISLEPGDIILTGTPAGVGELKPGDRVHCELLQNNDNIVDMNFECENRPG 252
>sp|Q8CPT8|Y665_STAES Uncharacterized protein SE_0665 OS=Staphylococcus epidermidis
(strain ATCC 12228) GN=SE_0665 PE=3 SV=1
Length = 301
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 30/64 (46%), Positives = 40/64 (62%)
Query: 13 VLPKSAVPDPYNFELWLKVDREIRQQGSTKDMIFKIPYLISHISSIMTLFEGDVILTGSP 72
++ K +P P N + KV+ EIRQ G+T +MI KI LI IS + L GD+I TG+P
Sbjct: 206 IVTKDELPAPENVNIVTKVNNEIRQDGNTGEMILKIDELIEKISKYVALHPGDIIATGTP 265
Query: 73 QGVG 76
GVG
Sbjct: 266 AGVG 269
>sp|Q5HQJ3|Y556_STAEQ Uncharacterized protein SERP0556 OS=Staphylococcus epidermidis
(strain ATCC 35984 / RP62A) GN=SERP0556 PE=3 SV=1
Length = 301
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 30/64 (46%), Positives = 40/64 (62%)
Query: 13 VLPKSAVPDPYNFELWLKVDREIRQQGSTKDMIFKIPYLISHISSIMTLFEGDVILTGSP 72
++ K +P P N + KV+ EIRQ G+T +MI KI LI IS + L GD+I TG+P
Sbjct: 206 IVTKDELPAPENVNIVTKVNNEIRQDGNTGEMILKIDELIEKISKYVALHPGDIIATGTP 265
Query: 73 QGVG 76
GVG
Sbjct: 266 AGVG 269
>sp|Q6GIC0|Y930_STAAR Uncharacterized protein SAR0930 OS=Staphylococcus aureus (strain
MRSA252) GN=SAR0930 PE=3 SV=1
Length = 300
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 30/64 (46%), Positives = 40/64 (62%)
Query: 13 VLPKSAVPDPYNFELWLKVDREIRQQGSTKDMIFKIPYLISHISSIMTLFEGDVILTGSP 72
++ K +P P N + KV+ EIRQ G+T +MI KI LI IS + L GD+I TG+P
Sbjct: 206 IVTKDELPLPENVNIVTKVNNEIRQDGNTGEMILKIDELIEEISKYVALHPGDIIATGTP 265
Query: 73 QGVG 76
GVG
Sbjct: 266 AGVG 269
>sp|Q5HHB6|Y973_STAAC Uncharacterized protein SACOL0973 OS=Staphylococcus aureus (strain
COL) GN=SACOL0973 PE=3 SV=1
Length = 300
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 30/64 (46%), Positives = 40/64 (62%)
Query: 13 VLPKSAVPDPYNFELWLKVDREIRQQGSTKDMIFKIPYLISHISSIMTLFEGDVILTGSP 72
++ K +P P N + KV+ EIRQ G+T +MI KI LI IS + L GD+I TG+P
Sbjct: 206 IVTKDELPLPENVNIVTKVNNEIRQDGNTGEMILKIDELIEEISKYVALHPGDIIATGTP 265
Query: 73 QGVG 76
GVG
Sbjct: 266 AGVG 269
>sp|Q99VC2|Y968_STAAM Uncharacterized protein SAV0968 OS=Staphylococcus aureus (strain
Mu50 / ATCC 700699) GN=SAV0968 PE=1 SV=1
Length = 300
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 30/64 (46%), Positives = 40/64 (62%)
Query: 13 VLPKSAVPDPYNFELWLKVDREIRQQGSTKDMIFKIPYLISHISSIMTLFEGDVILTGSP 72
++ K +P P N + KV+ EIRQ G+T +MI KI LI IS + L GD+I TG+P
Sbjct: 206 IVTKDELPLPENVNIVTKVNNEIRQDGNTGEMILKIDELIEEISKYVALHPGDIIATGTP 265
Query: 73 QGVG 76
GVG
Sbjct: 266 AGVG 269
>sp|Q2FZT4|Y906_STAA8 Uncharacterized protein SAOUHSC_00906 OS=Staphylococcus aureus
(strain NCTC 8325) GN=SAOUHSC_00906 PE=3 SV=1
Length = 300
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 30/64 (46%), Positives = 40/64 (62%)
Query: 13 VLPKSAVPDPYNFELWLKVDREIRQQGSTKDMIFKIPYLISHISSIMTLFEGDVILTGSP 72
++ K +P P N + KV+ EIRQ G+T +MI KI LI IS + L GD+I TG+P
Sbjct: 206 IVTKDELPLPENVNIVTKVNNEIRQDGNTGEMILKIDELIEEISKYVALHPGDIIATGTP 265
Query: 73 QGVG 76
GVG
Sbjct: 266 AGVG 269
>sp|Q2FIA7|Y871_STAA3 Uncharacterized protein SAUSA300_0871 OS=Staphylococcus aureus
(strain USA300) GN=SAUSA300_0871 PE=3 SV=1
Length = 300
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 30/64 (46%), Positives = 40/64 (62%)
Query: 13 VLPKSAVPDPYNFELWLKVDREIRQQGSTKDMIFKIPYLISHISSIMTLFEGDVILTGSP 72
++ K +P P N + KV+ EIRQ G+T +MI KI LI IS + L GD+I TG+P
Sbjct: 206 IVTKDELPLPENVNIVTKVNNEIRQDGNTGEMILKIDELIEEISKYVALHPGDIIATGTP 265
Query: 73 QGVG 76
GVG
Sbjct: 266 AGVG 269
>sp|Q7A1B6|Y850_STAAW Uncharacterized protein MW0850 OS=Staphylococcus aureus (strain
MW2) GN=MW0850 PE=3 SV=1
Length = 300
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 30/64 (46%), Positives = 40/64 (62%)
Query: 13 VLPKSAVPDPYNFELWLKVDREIRQQGSTKDMIFKIPYLISHISSIMTLFEGDVILTGSP 72
++ K +P P N + KV+ EIRQ G+T +MI KI LI IS + L GD+I TG+P
Sbjct: 206 IVTKDELPLPENVNIVTKVNNEIRQDGNTGEMILKIDELIEEISKYVALHPGDIIATGTP 265
Query: 73 QGVG 76
GVG
Sbjct: 266 AGVG 269
>sp|Q6GAV8|Y838_STAAS Uncharacterized protein SAS0838 OS=Staphylococcus aureus (strain
MSSA476) GN=SAS0838 PE=3 SV=1
Length = 300
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 30/64 (46%), Positives = 40/64 (62%)
Query: 13 VLPKSAVPDPYNFELWLKVDREIRQQGSTKDMIFKIPYLISHISSIMTLFEGDVILTGSP 72
++ K +P P N + KV+ EIRQ G+T +MI KI LI IS + L GD+I TG+P
Sbjct: 206 IVTKDELPLPENVNIVTKVNNEIRQDGNTGEMILKIDELIEEISKYVALHPGDIIATGTP 265
Query: 73 QGVG 76
GVG
Sbjct: 266 AGVG 269
>sp|Q2YWW3|Y837_STAAB Uncharacterized protein SAB0837 OS=Staphylococcus aureus (strain
bovine RF122 / ET3-1) GN=SAB0837 PE=3 SV=1
Length = 300
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 30/64 (46%), Positives = 40/64 (62%)
Query: 13 VLPKSAVPDPYNFELWLKVDREIRQQGSTKDMIFKIPYLISHISSIMTLFEGDVILTGSP 72
++ K +P P N + KV+ EIRQ G+T +MI KI LI IS + L GD+I TG+P
Sbjct: 206 IVTKDELPLPENVNIVTKVNNEIRQDGNTGEMILKIDELIEEISKYVALHPGDIIATGTP 265
Query: 73 QGVG 76
GVG
Sbjct: 266 AGVG 269
>sp|Q7A6H3|Y829_STAAN Uncharacterized protein SA0829 OS=Staphylococcus aureus (strain
N315) GN=SA0829 PE=1 SV=1
Length = 300
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 30/64 (46%), Positives = 40/64 (62%)
Query: 13 VLPKSAVPDPYNFELWLKVDREIRQQGSTKDMIFKIPYLISHISSIMTLFEGDVILTGSP 72
++ K +P P N + KV+ EIRQ G+T +MI KI LI IS + L GD+I TG+P
Sbjct: 206 IVTKDELPLPENVNIVTKVNNEIRQDGNTGEMILKIDELIEEISKYVALHPGDIIATGTP 265
Query: 73 QGVG 76
GVG
Sbjct: 266 AGVG 269
>sp|Q4L4Y4|Y1982_STAHJ Uncharacterized protein SH1982 OS=Staphylococcus haemolyticus
(strain JCSC1435) GN=SH1982 PE=3 SV=1
Length = 301
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 29/64 (45%), Positives = 39/64 (60%)
Query: 13 VLPKSAVPDPYNFELWLKVDREIRQQGSTKDMIFKIPYLISHISSIMTLFEGDVILTGSP 72
++ K +P P N + KV+ +IRQ G+T MI KI LI IS + L GD+I TG+P
Sbjct: 206 IVTKDELPTPENVNIVTKVNNDIRQDGNTSQMINKIDDLIEEISKYVALHPGDIIATGTP 265
Query: 73 QGVG 76
GVG
Sbjct: 266 AGVG 269
>sp|Q6GLT8|FAHD2_XENLA Fumarylacetoacetate hydrolase domain-containing protein 2
OS=Xenopus laevis GN=fahd2 PE=2 SV=1
Length = 319
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 45/73 (61%), Gaps = 1/73 (1%)
Query: 5 DTFTPIS-SVLPKSAVPDPYNFELWLKVDREIRQQGSTKDMIFKIPYLISHISSIMTLFE 63
DTF P+ +++ K + DP+N + +V+ ++ Q +T M+FK LI+ S +TL
Sbjct: 217 DTFCPLGPALVTKDVISDPHNLGIRCRVNGDLVQNSNTNQMVFKTEALIAWASKFVTLNP 276
Query: 64 GDVILTGSPQGVG 76
GDV LTG+P GVG
Sbjct: 277 GDVFLTGTPPGVG 289
>sp|Q49WA8|Y1806_STAS1 Uncharacterized protein SSP1806 OS=Staphylococcus saprophyticus
subsp. saprophyticus (strain ATCC 15305 / DSM 20229)
GN=SSP1806 PE=3 SV=1
Length = 301
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 39/64 (60%)
Query: 13 VLPKSAVPDPYNFELWLKVDREIRQQGSTKDMIFKIPYLISHISSIMTLFEGDVILTGSP 72
++ K +P P + + KV+ +IRQ G+T MI KI LI IS + L GD+I TG+P
Sbjct: 206 IVTKDELPTPEDVNIVTKVNNDIRQDGNTGQMILKIDELIEEISKYVALHPGDIIATGTP 265
Query: 73 QGVG 76
GVG
Sbjct: 266 AGVG 269
>sp|Q54BF3|FAHD2_DICDI Fumarylacetoacetate hydrolase domain-containing protein 2 homolog
OS=Dictyostelium discoideum GN=fahd2 PE=3 SV=1
Length = 305
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 45/84 (53%), Gaps = 9/84 (10%)
Query: 5 DTFTPIS---------SVLPKSAVPDPYNFELWLKVDREIRQQGSTKDMIFKIPYLISHI 55
DTF PI + L DP N + ++ ++ Q +TK+ IF I ++S++
Sbjct: 194 DTFAPIGPSIVINPEVAALSDDTYFDPNNLSIKCTLNGQVVQNSTTKEFIFNIQTVVSYL 253
Query: 56 SSIMTLFEGDVILTGSPQGVGPVK 79
S + TL GD+I TG+P GVG ++
Sbjct: 254 SKLFTLNPGDIIFTGTPSGVGFIR 277
>sp|O86042|NAGK_RALSP Fumarylpyruvate hydrolase OS=Ralstonia sp. GN=nagK PE=1 SV=1
Length = 192
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 38/63 (60%)
Query: 29 LKVDREIRQQGSTKDMIFKIPYLISHISSIMTLFEGDVILTGSPQGVGPVKAGQKTTAGI 88
L+V+ + +Q + +I+ + +I+ +S+ L GD+I TG+P+GVG V AG K +
Sbjct: 119 LEVNGQTKQSSNVDKLIWNVREIIADLSTYYHLQPGDLIYTGTPEGVGAVVAGDKIIGRV 178
Query: 89 AGL 91
G+
Sbjct: 179 EGI 181
>sp|Q67Q55|CARA_SYMTH Carbamoyl-phosphate synthase small chain OS=Symbiobacterium
thermophilum (strain T / IAM 14863) GN=carA PE=3 SV=1
Length = 363
Score = 30.4 bits (67), Expect = 3.4, Method: Composition-based stats.
Identities = 13/51 (25%), Positives = 23/51 (45%)
Query: 2 KGQDTFTPISSVLPKSAVPDPYNFELWLKVDREIRQQGSTKDMIFKIPYLI 52
+ T + + LP+ A P P W++ R R +G+ + + PY I
Sbjct: 115 RSHGTMRGVIATLPEGAEPGPAQVAAWVETARAFRLEGAVRSVATAAPYRI 165
>sp|A6LDT9|MNME_PARD8 tRNA modification GTPase MnmE OS=Parabacteroides distasonis (strain
ATCC 8503 / DSM 20701 / NCTC 11152) GN=mnmE PE=3 SV=1
Length = 461
Score = 29.3 bits (64), Expect = 6.6, Method: Composition-based stats.
Identities = 19/58 (32%), Positives = 32/58 (55%), Gaps = 5/58 (8%)
Query: 13 VLPKSAVPD-PYNFELWLKVDREIRQQGSTKDMIFKIPYLISHISSIMTLFEGDVILT 69
VLP S++P + E W +I +K I ++ L++ +SSI TL + D+I+T
Sbjct: 342 VLPTSSLPTFSFPTEGW----HQIAISAKSKLHIAELQQLLTEVSSIPTLHQSDIIVT 395
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.318 0.137 0.398
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 41,499,891
Number of Sequences: 539616
Number of extensions: 1524055
Number of successful extensions: 3563
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 50
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 3508
Number of HSP's gapped (non-prelim): 57
length of query: 107
length of database: 191,569,459
effective HSP length: 75
effective length of query: 32
effective length of database: 151,098,259
effective search space: 4835144288
effective search space used: 4835144288
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 55 (25.8 bits)