Query 039683
Match_columns 983
No_of_seqs 390 out of 2493
Neff 6.4
Searched_HMMs 29240
Date Mon Mar 25 21:06:26 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/039683.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/039683hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1h6z_A Pyruvate phosphate diki 100.0 3E-196 1E-200 1777.9 64.3 869 109-983 3-896 (913)
2 1vbg_A Pyruvate,orthophosphate 100.0 7E-186 2E-190 1694.9 79.5 871 109-983 2-876 (876)
3 1kbl_A PPDK, pyruvate phosphat 100.0 3E-186 1E-190 1698.1 73.3 866 111-983 2-870 (873)
4 2x0s_A Pyruvate phosphate diki 100.0 9E-178 3E-182 1640.5 68.3 868 109-982 3-895 (913)
5 2ols_A Phosphoenolpyruvate syn 100.0 3E-131 1E-135 1213.4 43.3 706 110-982 3-792 (794)
6 2hwg_A Phosphoenolpyruvate-pro 100.0 1.6E-93 5.6E-98 845.2 30.3 457 417-982 68-541 (575)
7 2wqd_A Phosphoenolpyruvate-pro 100.0 8.6E-93 2.9E-97 838.6 25.5 456 418-982 71-543 (572)
8 2xz9_A Phosphoenolpyruvate-pro 100.0 7.1E-60 2.4E-64 525.4 26.8 274 641-982 17-292 (324)
9 1zym_A Enzyme I; phosphotransf 99.9 2.3E-26 7.9E-31 248.2 1.3 165 417-624 68-236 (258)
10 2v5j_A 2,4-dihydroxyhept-2-ENE 99.9 1.1E-22 3.8E-27 223.2 20.2 211 642-980 39-271 (287)
11 1dxe_A 2-dehydro-3-deoxy-galac 99.9 1.2E-22 4.1E-27 219.8 17.4 214 642-980 19-250 (256)
12 2vws_A YFAU, 2-keto-3-deoxy su 99.9 6.6E-22 2.3E-26 215.3 22.1 213 643-980 19-250 (267)
13 1izc_A Macrophomate synthase i 99.8 2.7E-19 9.4E-24 200.2 19.2 208 642-973 42-280 (339)
14 3qz6_A HPCH/HPAI aldolase; str 99.8 5.3E-18 1.8E-22 183.8 21.2 140 813-980 90-249 (261)
15 1sgj_A Citrate lyase, beta sub 99.8 1.9E-19 6.5E-24 197.6 9.4 215 642-977 8-232 (284)
16 2e28_A Pyruvate kinase, PK; al 99.7 4.6E-19 1.6E-23 210.1 6.0 148 427-621 438-585 (587)
17 3t05_A Pyruvate kinase, PK; te 99.7 2.9E-18 9.9E-23 202.6 6.1 110 500-621 495-604 (606)
18 3r4i_A Citrate lyase; TIM beta 99.6 5.8E-15 2E-19 165.5 15.7 172 778-978 84-266 (339)
19 3qqw_A Putative citrate lyase; 99.5 1.5E-13 5E-18 153.8 16.5 173 778-978 85-267 (332)
20 3qll_A Citrate lyase; beta bar 99.5 5.8E-13 2E-17 148.0 15.9 146 788-978 114-268 (316)
21 1u5h_A CITE; TIM barrel, struc 98.9 3.2E-08 1.1E-12 107.8 20.1 127 813-978 86-221 (273)
22 1a3w_A Pyruvate kinase; allost 98.7 4.7E-08 1.6E-12 114.0 13.2 117 813-970 208-335 (500)
23 3oyz_A Malate synthase; TIM ba 98.5 3.8E-07 1.3E-11 103.7 13.1 137 812-977 116-270 (433)
24 1e0t_A Pyruvate kinase, PK; ph 98.2 4.5E-06 1.5E-10 96.7 12.8 117 813-970 187-315 (470)
25 2e28_A Pyruvate kinase, PK; al 98.1 9.3E-06 3.2E-10 96.7 12.8 143 777-968 161-314 (587)
26 3hqn_D Pyruvate kinase, PK; TI 97.8 4.4E-05 1.5E-09 88.8 10.5 115 813-968 207-332 (499)
27 3gr4_A Pyruvate kinase isozyme 97.8 9.4E-05 3.2E-09 86.8 13.0 115 813-968 257-382 (550)
28 3qtg_A Pyruvate kinase, PK; TI 97.7 9.4E-05 3.2E-09 85.1 11.3 114 813-967 198-322 (461)
29 3khd_A Pyruvate kinase; malari 97.6 0.00026 8.9E-09 82.6 11.9 143 777-968 204-357 (520)
30 3gg8_A Pyruvate kinase; malari 97.5 0.00017 5.8E-09 84.0 9.0 115 813-968 223-348 (511)
31 3cux_A Malate synthase; TIM ba 97.5 0.00094 3.2E-08 78.2 15.1 151 813-979 205-377 (528)
32 3t05_A Pyruvate kinase, PK; te 97.4 0.00046 1.6E-08 82.1 11.6 114 813-967 208-332 (606)
33 1p7t_A MSG, malate synthase G; 97.3 0.00098 3.4E-08 79.4 12.8 142 812-973 385-543 (731)
34 3cuz_A MSA, malate synthase A; 97.3 0.002 6.7E-08 75.6 15.2 151 813-979 208-379 (532)
35 4drs_A Pyruvate kinase; glycol 94.3 0.09 3.1E-06 61.7 8.9 116 813-967 231-362 (526)
36 3s9z_A Malate synthase G; inhi 73.5 6.3 0.00022 47.1 8.0 77 813-893 393-474 (741)
37 2hi6_A UPF0107 protein AF0055; 69.7 2.4 8.2E-05 41.2 2.8 54 553-620 80-134 (141)
38 3odm_A Pepcase, PEPC, phosphoe 34.4 1.3E+02 0.0045 35.3 9.8 78 794-871 121-202 (560)
39 4eys_A MCCC family protein; MC 32.1 2E+02 0.0068 31.7 10.7 78 532-618 245-343 (346)
40 1tqj_A Ribulose-phosphate 3-ep 28.3 1.3E+02 0.0046 30.9 8.0 90 849-969 112-203 (230)
41 1jqo_A Phosphoenolpyruvate car 26.8 2.7E+02 0.0093 35.0 11.5 119 794-942 514-637 (970)
42 4hf7_A Putative acylhydrolase; 24.9 55 0.0019 32.6 4.2 26 919-946 102-127 (209)
43 3sr3_A Microcin immunity prote 24.8 1.3E+02 0.0045 33.0 7.5 78 532-618 231-331 (336)
44 2wkj_A N-acetylneuraminate lya 24.0 1.9E+02 0.0064 31.1 8.5 59 643-728 80-144 (303)
45 3p94_A GDSL-like lipase; serin 22.8 92 0.0032 30.1 5.3 28 918-947 97-124 (204)
46 3k4i_A Uncharacterized protein 22.2 1.9E+02 0.0064 30.4 7.7 88 527-618 78-182 (244)
47 3tla_A MCCF; serine protease, 21.0 1.4E+02 0.0047 33.4 6.8 103 509-619 233-364 (371)
48 2ash_A Queuine tRNA-ribosyltra 20.6 9.1E+02 0.031 26.9 14.2 115 817-968 157-276 (381)
49 2ftp_A Hydroxymethylglutaryl-C 20.3 7.8E+02 0.027 26.0 13.4 48 918-967 120-179 (302)
50 3r2g_A Inosine 5'-monophosphat 20.2 1.2E+02 0.004 33.9 5.9 53 604-669 114-168 (361)
51 2bdq_A Copper homeostasis prot 20.2 1.1E+02 0.0038 31.8 5.3 67 654-756 80-147 (224)
No 1
>1h6z_A Pyruvate phosphate dikinase; transferase, tropical parasite, trypanosome; 3.00A {Trypanosoma brucei} PDB: 2x0s_A
Probab=100.00 E-value=3.3e-196 Score=1777.91 Aligned_cols=869 Identities=56% Similarity=0.952 Sum_probs=822.0
Q ss_pred CcceEEEccCCCccCCccCccccCHHHHhHHHHHhCCCCCCCcEEeCHHHHHHHHHhCcCCchhHHHHHHHHHHHHHHHh
Q 039683 109 TEKRVFTFGKGRSEGNKGMKSLLGGKGANLAEMSTIGLSVPPGLTISTEACQEYQQNGKKLSEGLWEEVLEGLETVEKEM 188 (983)
Q Consensus 109 ~~~~v~~~~~~~~~~~~~~~~lvGgKaanL~~L~~~GlpVP~GFvITt~a~~~fl~~~~~lp~~l~~~i~~~l~~le~~~ 188 (983)
.++||++|++++.+++.+|..++||||+||++|.++|+||||||+|||++|++|++++ .+|+++|++|.+.|+.+|..+
T Consensus 3 ~~k~v~~f~~~~~~~~~~~~~llGgKganL~em~~lglpVPpGF~Itteac~~~~~~~-~~~~~l~~~i~~~l~~le~~~ 81 (913)
T 1h6z_A 3 AKKWVYYFGGGNADGNKNMKELLGGKGANLAEMVNLGIPVPPGFTITTEACKTYQETE-TIPQEVADQVRENVSRVEKEM 81 (913)
T ss_dssp CCCCEEEECSSSCSCCTTCHHHHHHHHHHHHHHHHTTCCCCCEEEECHHHHTTTTTSS-CCCHHHHHHHHHHHHHHHHHH
T ss_pred CCCEEEECCCCcccCChhhHhhcChHhhhHHHHHHCCCCCCCcEEeeHHHHHHHHHcC-CCcHHHHHHHHHHHHHHHHHh
Confidence 3579999998888899999999999999999999999999999999999999999875 799999999999999999999
Q ss_pred ccccCCCCCccchhhcccccccchhHHHHHhcCCCcHHHHHH-HHHhcCC-chhHHHHHHHHhhccCcccccCcchHHHH
Q 039683 189 GALLGDPSKPLLLSVRSGAAISMPGMMDTVLNLGLNDEVAAG-LAEKCGG-RFAYDSYRRFLDMFGDVVMGIPHSLFEEK 266 (983)
Q Consensus 189 ~~~~g~~~~plllsvrs~a~~s~pg~~~~Il~~~lp~e~~~~-l~~~~g~-~~a~d~~~rl~~~~g~~~~~v~~~~f~~~ 266 (983)
++.||++.+|||+|||||+++||||||++|+|.|||++++++ |++.+|+ +||||+||||+++||+++++|+++.|++.
T Consensus 82 g~~fg~~~~PLLvsvrsga~~smpGmmdtilnlGlnd~~~~~~la~~~g~~~fa~d~Yrrfiq~~~~vv~~v~~~~fe~~ 161 (913)
T 1h6z_A 82 GAKFGDPANPLLFSVRSGAAASMPGMMDTVLNLGLNKVTVDAWVRRAPRLERFVYDSYRRFITMYADIVMQVGREDFEEA 161 (913)
T ss_dssp CCBTTCTTSBCCEEEEESCTTC-----CCCCSBSCCHHHHHHHGGGCGGGHHHHHHHHHHHHHHHHHHHHCCCSTTTSTT
T ss_pred CcccCCCCCccceeeecccccccchHHHHHHhcCCCHHHHHHHHHHhcCChhHHHHHHHHHHHHhchhhcCCCHHHHHHH
Confidence 999999999999999999999999999999999999999999 9999995 99999999999999999999999999999
Q ss_pred HHHHHhhcCccccCCCChhhHHHHHHHHHhhhhcccCCCCCCChHHHHHHHHHHHHhcCCChhHHHHHHHcCCCCCCCce
Q 039683 267 LEHMKEAKGVKLDTDLSASDLKELVKQYKNVYIETKGEEFPSDPKKQLQLSVKAVFDSWDSPRAIKYRSINQITGLKGTA 346 (983)
Q Consensus 267 l~~~~~~~~vavrSs~~~ED~~~~ag~y~s~~l~v~G~~~p~d~~~~l~~Aik~v~aS~~s~rA~~YR~~~g~~~~~~ma 346 (983)
+++++...++..++++++|||.++.+.|++++.+.+|.+||+||.+||..||++||+||||+||+.||+.+|++++.+||
T Consensus 162 ~~~~k~~~g~~~d~~~~a~dl~~~~~~yk~~~~~~~g~~fp~dp~eqL~~AI~~v~aS~~s~RAi~YR~~~gi~~~~~mA 241 (913)
T 1h6z_A 162 LSRMKERRGTKFDTDLTASDLKELCDGYLELFELKTGCSFPQDPVMQLFAAIKAVFRSWGNPRATIYRRMNNITGLLGTA 241 (913)
T ss_dssp THHHHHHHSCSCGGGCCHHHHHHHHHTTHHHHHHHSSSCCCCCHHHHHHHHHHHHHHTTTCTTTTTHHHHSCCCSCCCCC
T ss_pred HHHHHHHcCCCcccCCCHHHHHHHHHHHHHHHHHHhCCCCCcCHHHHHHHHHHHHHHhcCcHHHHHHHHHcCCChhhcce
Confidence 99999999999999999999999999999999888999999999999999999999999999999999999999889999
Q ss_pred EEEEEcccCCCCCccceEEEEecCCCCCCcceeeEEEEeccccceecccccccchhhh----------------------
Q 039683 347 VNIQCMVFGNMGNTSGTGVLFTRNPSTGENKLYGEFLINAQGEDVVAGIRTPEDLNTM---------------------- 404 (983)
Q Consensus 347 V~VQ~MV~g~~~~~~~sGV~fT~nP~tg~~~~~ge~~i~~~Ge~vVsG~~~pd~~~~~---------------------- 404 (983)
|+||+||+||+++.++|||+||+||.||+++.+|+|+|+|+||+||+|.++||+|.+.
T Consensus 242 V~VQ~MV~g~~~~~s~SGV~FT~dP~TG~~~~~ge~li~alGE~VVsG~vtPd~~~v~~~~~~~~~~i~~~~~~~~~~~~ 321 (913)
T 1h6z_A 242 VNVQAMVFGNINDRSATGVAFSRSPSTGENFFFGEYLVNAQGEDVVAGIRTPQQINHSLSLRWAKAHGVGEEERRKRYPS 321 (913)
T ss_dssp EEEEECCCSCSSTTCEEEEEESSCSSSCCSSCEEEEEESCCTTHHHHCCSCCEESSHHHHHHHHTTSSCCHHHHHHHSCC
T ss_pred EEEEEEeccCCCCcceeEEEEeCCCCCCCcceeeEEEEecCCchhccCCccCeEEEEecccchhhcccchhhhcccCchh
Confidence 9999999999999999999999999999999999999999999999999999999531
Q ss_pred -hhcchHHHHHHHHHHHHHHHHhccccCcccccccCcEEEEEeecccccHHHHHHHHHHHHHhhhcchHHHhhccChHhh
Q 039683 405 -KSYMPEAYKELVENCEILERHYKDMMDIEFTVQENRLWMLQCRSGKRTGKAAVKIAVDMVNEGLVDTRAAVKMVEPQHL 483 (983)
Q Consensus 405 -~~~~p~~~~~La~~a~ilE~~~~~~qDiEf~~~~~~l~ILQ~Rp~~~~a~~Av~~a~~~~~~~~~~~~~~~~~~~~~~l 483 (983)
....|+.+.+|++++..+|.||+.||||||+++++++||||+||.++++.+|++++++++.+++++.++.+.++.+.++
T Consensus 322 l~~l~p~~~~eLa~~a~~lE~hyg~pqDIEwai~~G~LyILQaRP~~rt~~aav~~a~d~~~eg~i~~~~a~~rv~p~~l 401 (913)
T 1h6z_A 322 MEEAMPENYRLLCDVRKRLENHYRDMQDLEFTVQDGRLWLLQCRNGKRTIHAAVRIAIDMVNEGLISREEAVLRIDPYQV 401 (913)
T ss_dssp HHHHSHHHHHHHHHHHHHHHHHHTSCEEEEEEEETTEEEEEEEEECCCCHHHHHHHHHHHHHHTSSCHHHHHHTSCGGGG
T ss_pred hhhcCHHHHHHHHHHHHHHHHHhCCCceEEEEEECCEEEEEEecCcccchHHHHHHHHHHHhccCCCHHHHHhccCHHHH
Confidence 2234789999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhcCCCCCCCcccchhhhhcCCCCCCCcEEEEEEcChhHHHHHHhcCCCeEEEecCCCcchHhhhhhhceEEEccCCcc
Q 039683 484 DQLLHPQFEDPSAYKDKVVATGLPASPGAAVGQVVFSAEDAEAWHAQGKSAILVRTETSPEDIGGMHAAAGILTARGGMT 563 (983)
Q Consensus 484 ~~l~~~~~~~~~~~~~~vl~~G~~~s~G~a~G~v~~~~~~~~~~~~~~~~~ILV~~~~~P~~~~~l~~a~GiVt~~Gg~t 563 (983)
++++||.+.........++++|+++|||+++|+|+++.+++.++.+.++++|||+++|+|+|+..|+++.||||++||+|
T Consensus 402 ~~llhp~~~~~~~~~~~~l~~G~~aspG~a~G~v~~~~~~a~~~~~~ge~~ILV~~~t~P~d~~~m~~a~GIvT~~GG~T 481 (913)
T 1h6z_A 402 DHLMHPNLEPGAEKANKPIGRGLAASPGAAVGQVVFDAESAKEWSGRGKKVIMVRLETSPEDLAGMDAACGILTARGGMT 481 (913)
T ss_dssp GGGGCCCCCTTTTSCCCCCEECEEEESCEEEEEEESSHHHHHSTTTTSCCEEEEESSCCGGGCTTTTTSSEEEESSCCTT
T ss_pred hhhcccccccccccccceeccceecCCceEEEEEEECHHHHHHHHhcCCCEEEEECCCCHHHHHhHHhceEEEEcCCCcc
Confidence 99999998754433457889999999999999999998877666667888999999999999999999999999999999
Q ss_pred chHHHhhcccCceEEeccCccccccCCceEEeccEEeeCCCEEEEECCccEEEEcCCCCCCCCccchHHHHHHHhhhhhc
Q 039683 564 SHAAVVARGWGKCCVSGCSDIRVNDNEKSIVVGDMVISEGDWLSLNGSTGEVILGKQPLAPPAMSGDLEIFMSWADEIRR 643 (983)
Q Consensus 564 SHaAIvAR~lgIP~VvGv~~~~~~~~~~~~~~~~~~l~~G~~VtlDg~~G~V~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 643 (983)
||+|||||+||||||+||++++++ .|++++++..+++||+|||||++|.||.|+.+...+.+..++..++.|.++.++
T Consensus 482 SHaAIvAR~lGiPaVvG~~~~~~d--~~~~~~~~~~l~~Gd~VtvDG~~G~V~~g~~~~~~~~~~~~~~~l~~~~~~~~~ 559 (913)
T 1h6z_A 482 SHAAVVARGMGKCCVSGCGDMVIR--GKSFKLNGSVFREGDYITIDGSKGLIYAGKLKLRSPDLKGSFQTILQWCQEMKR 559 (913)
T ss_dssp CHHHHHHHHTTCCEEECCTTCEES--SSCEEETTEEESSCEEEEETTSEEESCCCCCCCCCSCSTTHHHHHHHHHHHHCC
T ss_pred cHHHHHHHhcCCCEEECCcccccc--cceeccCceEecCCCEEEEECCCCEEEECCCcccchhhHHHHHHHHHhhccCeE
Confidence 999999999999999999999877 789999999999999999999999999999988777777778889999998899
Q ss_pred eEEEecCCChHhHHHHHHcCCCccccchhhhhhcccchhhHHHHHHhhcCCHHHHHHHHHhhchhHHHHHHHHHHHcCCC
Q 039683 644 LKVMANADTPDDALTARNNGAQGIGLCRTEHMFFASDERIKAVRKMIMAVTPEQRKAALDLLLPYQRSDFEGIFRAMDGL 723 (983)
Q Consensus 644 i~v~aNi~~p~d~~~a~~~ga~GIGL~RTE~~f~~~~~~~p~v~~~~~~~~ee~~~~~l~~l~~~q~~~y~~i~~a~~~~ 723 (983)
++|++|+++|+|+..+.++||+||||||||||||+.+ ++|.+++||+++++++|+++|++|+++|+++|++|+++|.|+
T Consensus 560 ~~v~aN~~~p~da~~a~~~gaeGIGL~RTEfmf~~~~-~~p~~~~mi~a~~eee~~~al~~l~~~Q~~~y~~i~~a~~g~ 638 (913)
T 1h6z_A 560 LGVRTNADTPADAAKARSFGAEGVGLCRTEHMFFEGS-RINFIREMILADSASGRKAALDKLLPIQRADFVGILRAMRGL 638 (913)
T ss_dssp SEEEEECSSHHHHHHHHTTTCCSEEECBCSGGGSTTT-HHHHHHHHHSCSSHHHHHHHHHHHHHHHHHHHHHHHTTTSSS
T ss_pred EEEEEeCCCHHHHHHHHhCCCceeccCccHHHhhcCc-cCccHHHHhcCCCHHHHHHHHHHhhhhhHHHHHHHHHHcCCC
Confidence 9999999999999999999999999999999999987 899999999999999999999999999999999999999999
Q ss_pred cEEEEecCCCCCCCCCCCchHHHHHHHHHHcCCChhhhhhhhhccccCCCCCCCccccccCCChHHHHHHHHHHHHHHHH
Q 039683 724 PVTIRLLDPPLHEFLPEGDLEQIVNELTLETGMSEDEVFSRIEKLSEVNPMLGFRGCRLGISYPELTEMQVRAIFQAAVS 803 (983)
Q Consensus 724 pVtiR~lD~~~~eflp~~~~~~~~~~~~~~~G~~~dk~~~~~~~~~E~NP~LG~RGiR~~l~~p~i~~~QlrAi~rAa~~ 803 (983)
||||||||+|+|||+|+. ++.+.++++++|++.||+++++..++|.||||||||||+++.|||+|++|+|||+||+..
T Consensus 639 PV~IRtlD~pl~eflp~~--~~~~~e~a~~~G~~~dk~~~~~~~~~E~NPmLG~RG~Rl~l~~peif~~QlrAi~rAa~~ 716 (913)
T 1h6z_A 639 PVTIRLLDPPLHEFVPHD--AAAQFELAQKLGMPAEKVRNRVNALHELNPMLGHRGCRLGITYPEIYNMQVRAIIEAAIA 716 (913)
T ss_dssp CEEEECCCSCGGGGCCSS--CSSTTTTSCSSSCCHHHHHHHHHSSCCSSSTTSSCHHHHHHHSTTHHHHHHHHHHHHHHH
T ss_pred eEEEECCCCcccccCCch--hhHHHHHHHHcCCCHHHHHhhhcCCCCCCCCCccchhccCCCChHHHHHHHHHHHHHHHH
Confidence 999999999999999973 345667788889888999999999999999999999999999999999999999999998
Q ss_pred ccccCCccCcEEEeecCCCHHHHHHHHHHHHHHHHHHHHHcCCCCCceEEEEEecHHHHHHHHHHHhhCCEEEEcchhhh
Q 039683 804 MSNHRFKVFPEIMVPLVGTPQELGHQISLIRNVATKVFSEMGSSLDYKVGTMIEIPRAALVADEIAKEAEFFSFGTNDLT 883 (983)
Q Consensus 804 ~~~~g~~~~l~ImiPmV~~~~E~~~~~~~~~~~~~~~~~~~g~~~~~~vg~MIEtP~a~~~a~~ia~~~Df~sIGtNDLt 883 (983)
+.++|..++++||||||++++|++++++.+++++++++++.|.++++++|+|||+|+|++++|+||+++|||||||||||
T Consensus 717 ~~~~G~~~~~~IMiPmV~t~~E~~~~~~~i~~~~~el~~e~g~~~~~~vG~MiEvPsaal~ad~ia~~~DFfSiGTNDLT 796 (913)
T 1h6z_A 717 VSEEGSSVIPEIMVPLVGKKEELSLIREEVVKTAEAVITKSGKRVHYTVGTMIEVPRAAVTADSIAQKADFFSFGTNDLT 796 (913)
T ss_dssp HHTTTCCCCEEEEECCCCSHHHHHHHHHHHHHHHHHHHHHSCSCCCCEEEEEECSHHHHHTHHHHTTTCSEEEECTTHHH
T ss_pred HHhcCCCCCeEEEecCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCCceEEEEecchHHHHHHHHHHHhCCEEEEChHHHH
Confidence 88888777899999999999999999999999999888777888789999999999999999999999999999999999
Q ss_pred hhhhcCcCCCccccchhhhccCCCCCCCcccCCHHHHHHHHHHHHHHhhhcCCCCeEEEcCCCCCChHHHHHHHHcCCCE
Q 039683 884 QMTFGYSRDDVGKFLPVYLSKGILQSDPFEVLDQKGVGQLIKIATERGRAARPSLKVGICGEHGGEPSSVAFFAEAGLDY 963 (983)
Q Consensus 884 q~~la~dR~~~~~~~~~y~~~~i~~~~p~~~~d~~aV~~lI~~~~~~a~~~~~g~~v~iCGe~a~~p~~~~~l~~lG~~~ 963 (983)
|||||+||+|.++|++.|+++||++.||||.+|+|+|++||++++++||++++|++||||||+++||.++++|+++|+|+
T Consensus 797 Q~tlg~dRd~~~~~l~~y~~~~i~~~dPf~~ld~paV~~lI~~ai~~a~~~~~g~~vgICGE~~gdP~~~~~l~~~Gid~ 876 (913)
T 1h6z_A 797 QMGCGFSRDDAGPFLRHYGNLGIYAQDPFQSIDQEGIGELVRIAVTKGRRVKPMLKMGICGEHGGDPATIGFCHKVGLDY 876 (913)
T ss_dssp HHHHTCCGGGCHHHHTTTTTTCSSSSCTTTSCCTTTHHHHHHHHHHHHHHHSTTCEEEECSGGGGCHHHHHHHHHHTCSE
T ss_pred HHHhccCCCchHHHHHHHHhccccccCcccccChHHHHHHHHHHHHHHHhcCCCCEEEEcCCCCCCHHHHHHHHHcCCCE
Confidence 99999999998778999999999999999999988999999999999998788999999999999999999999999999
Q ss_pred EecCCCchHHHHHHhhhhcC
Q 039683 964 VSCSPFRVPIARLAAAQVAV 983 (983)
Q Consensus 964 ~Sv~p~~i~~~r~a~a~~~~ 983 (983)
|||||++||.+|+|+||+++
T Consensus 877 vS~sp~~Vp~arlaaaq~~~ 896 (913)
T 1h6z_A 877 VSCSPFRVPVAIVAAAHASI 896 (913)
T ss_dssp EEECGGGHHHHHHHHHHHHH
T ss_pred EEECchHHHHHHHHHHHHHH
Confidence 99999999999999999864
No 2
>1vbg_A Pyruvate,orthophosphate dikinase; transferase, maize, riken structural genomics/proteomics INI RSGI, structural genomics; 2.30A {Zea mays} SCOP: c.1.12.2 c.8.1.1 d.142.1.5 PDB: 1vbh_A*
Probab=100.00 E-value=7.3e-186 Score=1694.94 Aligned_cols=871 Identities=81% Similarity=1.295 Sum_probs=822.5
Q ss_pred CcceEEEccCCCccCCccCccccCHHHHhHHHHHhCCCCCCCcEEeCHHHHHHHHHhCcCCchhHHHHHHHHHHHHHHHh
Q 039683 109 TEKRVFTFGKGRSEGNKGMKSLLGGKGANLAEMSTIGLSVPPGLTISTEACQEYQQNGKKLSEGLWEEVLEGLETVEKEM 188 (983)
Q Consensus 109 ~~~~v~~~~~~~~~~~~~~~~lvGgKaanL~~L~~~GlpVP~GFvITt~a~~~fl~~~~~lp~~l~~~i~~~l~~le~~~ 188 (983)
+++||++|+.+.++++.++..++|||++||++|.+.|+||||||||||++|++|+++++++|+++|++|.+.++.++..+
T Consensus 2 ~~~~v~~f~~~~~~~~~~~~~~vGGKganL~em~~~glpVP~GF~Itt~a~~~~~~~~~~~~~~l~~~i~~~l~~le~~~ 81 (876)
T 1vbg_A 2 TKKRVFHFGKGKSEGNKTMKELLGGKGANLAEMASIGLSVPPGFTVSTEACQQYQDAGCALPAGLWAEIVDGLQWVEEYM 81 (876)
T ss_dssp -CCSEEEEETTEESSCTTCTTTTHHHHHHHHHHHHTTCCCCCEEEECHHHHHHHHHTTSCCCTTHHHHHHHHHHHHHHHH
T ss_pred CCcEEEECCccccccCccccccCcHHHHHHHHHHHCCCCCCCeEEECHHHHHHHHHhcccccHHHHHHHHHHHHHHHHhh
Confidence 46799999666667888899999999999999999999999999999999999999877899999999999999999999
Q ss_pred ccccCCCCCccchhhcccccccchhHHHHHhcCCCcHHHHHHHHHhcCCchhHHHHHHHHhhccCcccccCcchHHHHHH
Q 039683 189 GALLGDPSKPLLLSVRSGAAISMPGMMDTVLNLGLNDEVAAGLAEKCGGRFAYDSYRRFLDMFGDVVMGIPHSLFEEKLE 268 (983)
Q Consensus 189 ~~~~g~~~~plllsvrs~a~~s~pg~~~~Il~~~lp~e~~~~l~~~~g~~~a~d~~~rl~~~~g~~~~~v~~~~f~~~l~ 268 (983)
++.|+++.+|+++++||++.+||||||++|+|.+||++++++|++.+|++||||+|++|+++||+++++|+++.|++.++
T Consensus 82 ~~~~gd~~~plllsvrs~a~~smpgm~~tIln~~lpd~~~~~l~~~~~~~fA~d~yrr~~q~~~~~~~~vr~~~f~~~~~ 161 (876)
T 1vbg_A 82 GATLGDPQRPLLLSVRSGAAVSMPGMMDTVLNLGLNDEVAAGLAAKSGERFAYDSFRRFLDMFGNVVMDIPRSLFEEKLE 161 (876)
T ss_dssp TCBTTCSSSBCCEEEECCCSSCCTTCCCCEEEETCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHTSCCCHHHHHHHHH
T ss_pred ccccCCCcccccceecccccccchhHHHHHHcCCCCHHHHHHHHHhhccchHHHHHHHHHhhccceeeecChhhHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhhcCccccCCCChhhHHHHHHHHHhhhhcccCCCCCCChHHHHHHHHHHHHhcCCChhHHHHHHHcCCCCCCCceEE
Q 039683 269 HMKEAKGVKLDTDLSASDLKELVKQYKNVYIETKGEEFPSDPKKQLQLSVKAVFDSWDSPRAIKYRSINQITGLKGTAVN 348 (983)
Q Consensus 269 ~~~~~~~vavrSs~~~ED~~~~ag~y~s~~l~v~G~~~p~d~~~~l~~Aik~v~aS~~s~rA~~YR~~~g~~~~~~maV~ 348 (983)
+++++.++++|||+++||+..+...|+.+|.++.|++||+||.+||+.||++||+||||+||+.||+.+|++++.+|||+
T Consensus 162 ~~~~~~~v~~~ss~taEDl~~~~~sf~~~y~~~~g~~fp~d~~~qL~~Ai~~v~aS~~~~RAi~YR~~~gi~~~~~~AV~ 241 (876)
T 1vbg_A 162 HMKESKGLKNDTDLTASDLKELVGQYKEVYLSAKGEPFPSDPKKQLELAVLAVFNSWESPRAKKYRSINQITGLRGTAVN 241 (876)
T ss_dssp HHHHHHTCSSGGGCCHHHHHHHHHHHHHHHHHHHSSCCCCCHHHHHHHHHHHHHHHTTCHHHHHHHHTTTCCCCCCCCEE
T ss_pred HHHHhcCccccccCCHHHHHHHHHHHHHHHHHhcCCCCCCChHHHHHHHHHHHHhccCCHHHHHHHHhcCCCchhCceEE
Confidence 99999999999999999998877777777777789999999999999999999999999999999999999998999999
Q ss_pred EEEcccCCCCCccceEEEEecCCCCCCcceeeEEEEeccccceecccccccchhhhhhcchHHHHHHHHHHHHHHHHhcc
Q 039683 349 IQCMVFGNMGNTSGTGVLFTRNPSTGENKLYGEFLINAQGEDVVAGIRTPEDLNTMKSYMPEAYKELVENCEILERHYKD 428 (983)
Q Consensus 349 VQ~MV~g~~~~~~~sGV~fT~nP~tg~~~~~ge~~i~~~Ge~vVsG~~~pd~~~~~~~~~p~~~~~La~~a~ilE~~~~~ 428 (983)
||+||+||++++++|||+||+||.||+++.+|+|+|||+||+||+|.++||.|.+++...|+.+++|++++..||.||+.
T Consensus 242 VQ~MV~g~~g~~s~sGV~FT~nP~tG~~~~~g~~li~a~GE~VVsG~~tPd~~~~l~~~~p~~~~~L~~~~~~lE~hy~~ 321 (876)
T 1vbg_A 242 VQCMVFGNMGNTSGTGVLFTRNPNTGEKKLYGEFLVNAQGEDVVAGIRTPEDLDAMKNLMPQAYDELVENCNILESHYKE 321 (876)
T ss_dssp EEECCCSCSSTTCEEEEEESSCTTTCCSSCEEEEEESSCHHHHHHTSCCCEETHHHHHHCHHHHHHHHHHHHHHHHHHCS
T ss_pred EEEeccCCCCCCeeEEEEEeCCCCCCCcccceEEEEecCchhhhcCCcCcchhhhhcccCHHHHHHHHHHHHHHHHHcCC
Confidence 99999999999999999999999999999999999999999999999999999988888899999999999999999999
Q ss_pred ccCcccccccCcEEEEEeecccccHHHHHHHHHHHHHhhhcchHHHhhccChHhhhhhcCCCCCCCcccchhhhhcCCCC
Q 039683 429 MMDIEFTVQENRLWMLQCRSGKRTGKAAVKIAVDMVNEGLVDTRAAVKMVEPQHLDQLLHPQFEDPSAYKDKVVATGLPA 508 (983)
Q Consensus 429 ~qDiEf~~~~~~l~ILQ~Rp~~~~a~~Av~~a~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~vl~~G~~~ 508 (983)
||||||+++++++||||+||.++++.++++++++++.+|+++.+++++++.+.+++++++|.+...+.....++.+|+++
T Consensus 322 pqDIEfti~~g~L~iLQ~Rp~krt~~a~~~ia~~lv~eg~i~~~~~~~~~~~~~l~~ll~~~~~~~~~~~~~~l~~G~~a 401 (876)
T 1vbg_A 322 MQDIEFTVQENRLWMLQCRTGKRTGKSAVKIAVDMVNEGLVEPRSAIKMVEPGHLDQLLHPQFENPSAYKDQVIATGLPA 401 (876)
T ss_dssp CEEEEEEEETTEEEEEEEEECCCCHHHHHHHHHHHHHTTSSCHHHHGGGSCHHHHHHTTSCCBSCGGGGTTTEEEECEEE
T ss_pred CeEEEEEEECCEEEEEEecccccchHHHHHHHHHHHHcCCCChHHHHHhCCHHHHHHHhccccchhhcccCceeecCccc
Confidence 99999999999999999999999999999999999999999999999999999999999998764322234678899999
Q ss_pred CCCcEEEEEEcChhHHHHHHhcCCCeEEEecCCCcchHhhhhhhceEEEccCCccchHHHhhcccCceEEeccCcccccc
Q 039683 509 SPGAAVGQVVFSAEDAEAWHAQGKSAILVRTETSPEDIGGMHAAAGILTARGGMTSHAAVVARGWGKCCVSGCSDIRVND 588 (983)
Q Consensus 509 s~G~a~G~v~~~~~~~~~~~~~~~~~ILV~~~~~P~~~~~l~~a~GiVt~~Gg~tSHaAIvAR~lgIP~VvGv~~~~~~~ 588 (983)
|+|+++|+|+++.+++..+.+.++++|||+++|+|+|++.|+++.||||+.||+|||+|||||+||||||+||+++.++.
T Consensus 402 s~G~a~G~vv~~~~~~~~~~~~g~~~ILV~~~t~P~~~~~~~~a~GivT~~GG~tSHaAIvAR~lGiP~VvG~~~~~~~~ 481 (876)
T 1vbg_A 402 SPGAAVGQVVFTAEDAEAWHSQGKAAILVRAETSPEDVGGMHAAVGILTERGGMTSHAAVVARGWGKCCVSGCSGIRVND 481 (876)
T ss_dssp ECSEEEEEEESSHHHHHHHHHTTCCEEEEESCCCTTSHHHHHHSSEEEESSCCTTSHHHHHHHHTTCCEEECCTTEEEEG
T ss_pred CCCeEEEEEEECHHHHHHHhhccCCEEEEEcCCCHHHHHhHhhccEEEECCCCCccHHHHHHhHcCCCEEEcCCCceecc
Confidence 99999999999888777666678899999999999999999999999999999999999999999999999999999898
Q ss_pred CCceEEeccEEeeCCCEEEEECCccEEEEcCCCCCCCCccchHHHHHHHhhhhhceEEEecCCChHhHHHHHHcCCCccc
Q 039683 589 NEKSIVVGDMVISEGDWLSLNGSTGEVILGKQPLAPPAMSGDLEIFMSWADEIRRLKVMANADTPDDALTARNNGAQGIG 668 (983)
Q Consensus 589 ~~~~~~~~~~~l~~G~~VtlDg~~G~V~~g~~~~~~~~~~~~~~~~~~~~~~~~~i~v~aNi~~p~d~~~a~~~ga~GIG 668 (983)
..|++++++..+++||+|||||++|.||.|+.+...+.....+..++.|.+..++++|++|+++|+|+..+.++||+|||
T Consensus 482 ~~~~~~~~~~~l~~G~~vtvDG~~G~V~~g~~~~~~~~~~~~~~~l~~~~~~~~~~~v~aN~~~p~da~~a~~~ga~GIG 561 (876)
T 1vbg_A 482 AEKLVTIGGHVLREGEWLSLNGSTGEVILGKQPLSPPALSGDLGTFMAWVDDVRKLKVLANADTPDDALTARNNGAQGIG 561 (876)
T ss_dssp GGTEEEETTEEEETTCEEEEETTTTEEEESCCCBCCCCCSCHHHHHHHHHHHHCCSEEEEECSSHHHHHHHHHTTCCSEE
T ss_pred ccceEEeCCeeecCCCEEEEECCCCEEEECCChhhhhhhhHHHHHHHHhhhhcceeEEEEecCCHHHHHHHHhCCCccee
Confidence 99999999999999999999999999999999877666666777888898888899999999999999999999999999
Q ss_pred cchhhhhhcccchhhHHHHHHhhcCCHHHHHHHHHhhchhHHHHHHHHHHHcCCCcEEEEecCCCCCCCCCCCchHHHHH
Q 039683 669 LCRTEHMFFASDERIKAVRKMIMAVTPEQRKAALDLLLPYQRSDFEGIFRAMDGLPVTIRLLDPPLHEFLPEGDLEQIVN 748 (983)
Q Consensus 669 L~RTE~~f~~~~~~~p~v~~~~~~~~ee~~~~~l~~l~~~q~~~y~~i~~a~~~~pVtiR~lD~~~~eflp~~~~~~~~~ 748 (983)
|||||||||+.++++|.+++||+.+++++|+++|++|+++|+++|++|+++|.|+||||||||+|+|||||+. .++
T Consensus 562 L~RtE~mf~~~~~~~~~~~~mi~~~~~~~r~~~l~~l~~~q~~~y~~i~~a~~~~pV~iR~lD~p~~eflp~~----~~~ 637 (876)
T 1vbg_A 562 LCRTEHMFFASDERIKAVRQMIMAPTLELRQQALDRLLPYQRSDFEGIFRAMDGLPVTIRLLDPPLHEFLPEG----NIE 637 (876)
T ss_dssp EEEHHHHHTTCHHHHHHHHHHHHCSSHHHHHHHHHHHHHHHHHHHHHHHHHTTTSEEEEECCCSCGGGGSCCS----CHH
T ss_pred ehhhHHHHhhcccCCCcHHHHhhcCchhhHHHHHHHHHHHHHHHHHHHHHHcCCCcEEEEecCCcccccccch----hHH
Confidence 9999999998753689999999999999999999999999999999999999999999999999999999996 456
Q ss_pred HHHHHcCCC----hhhhhhhhhccccCCCCCCCccccccCCChHHHHHHHHHHHHHHHHccccCCccCcEEEeecCCCHH
Q 039683 749 ELTLETGMS----EDEVFSRIEKLSEVNPMLGFRGCRLGISYPELTEMQVRAIFQAAVSMSNHRFKVFPEIMVPLVGTPQ 824 (983)
Q Consensus 749 ~~~~~~G~~----~dk~~~~~~~~~E~NP~LG~RGiR~~l~~p~i~~~QlrAi~rAa~~~~~~g~~~~l~ImiPmV~~~~ 824 (983)
+++++.|++ .+|+++++..++|.||||||||||+++.|||+|++|+|||+||+..+.++|..++++||+|||++++
T Consensus 638 ~~~~~~G~d~~~~~~k~~~~~~~~~E~NP~LG~RG~Rl~l~~peif~~QlrAi~~Aa~~~~~~G~~~~~~ImiP~V~t~~ 717 (876)
T 1vbg_A 638 DIVSELCAETGANQEDALARIEKLSEVNPMLGFRGCRLGISYPELTEMQARAIFEAAIAMTNQGVQVFPEIMVPLVGTPQ 717 (876)
T ss_dssp HHHHHHHHHHCCCHHHHHHHHHHHCCSCGGGSSCTHHHHHHSHHHHHHHHHHHHHHHHHHHTTTCCCEEEEEECSCCSHH
T ss_pred HHHHHcCCCccchhhhhhhhccCccCCCCcccccccccccCChHHHHHHHHHHHHHHHHHHhcCCCCCeEEEEcCCCCHH
Confidence 778888866 5699999999999999999999999999999999999999999999888887768999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHcCCCCCceEEEEEecHHHHHHHHHHHhhCCEEEEcchhhhhhhhcCcCCCccccchhhhcc
Q 039683 825 ELGHQISLIRNVATKVFSEMGSSLDYKVGTMIEIPRAALVADEIAKEAEFFSFGTNDLTQMTFGYSRDDVGKFLPVYLSK 904 (983)
Q Consensus 825 E~~~~~~~~~~~~~~~~~~~g~~~~~~vg~MIEtP~a~~~a~~ia~~~Df~sIGtNDLtq~~la~dR~~~~~~~~~y~~~ 904 (983)
|++++++.+++++.++.++.|.+..+++|+|||||+|++++++||+.+|||||||||||||+||+||+|.+++...|.++
T Consensus 718 E~~~~~~~i~~~~~~~~~~~G~~~~~~vg~MIEtP~a~l~adeIA~~vDf~siGtNDLtQ~~lg~dR~~~~~~~~~~~~~ 797 (876)
T 1vbg_A 718 ELGHQVTLIRQVAEKVFANVGKTIGYKVGTMIEIPRAALVADEIAEQAEFFSFGTNDLTQMTFGYSRDDVGKFIPVYLAQ 797 (876)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTCCCCCEEEEEECSHHHHHTHHHHTTTCSEEEECHHHHHHHHHTCCTTTGGGTHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHhcCCCcCcEEEEEEccHHHHHHHHHHHHhCCEEEECHHHHHHHHhCCCCCchhhhHHHHhhc
Confidence 99999999999888777667776678999999999999999999999999999999999999999999987789999999
Q ss_pred CCCCCCCcccCCHHHHHHHHHHHHHHhhhcCCCCeEEEcCCCCCChHHHHHHHHcCCCEEecCCCchHHHHHHhhhhcC
Q 039683 905 GILQSDPFEVLDQKGVGQLIKIATERGRAARPSLKVGICGEHGGEPSSVAFFAEAGLDYVSCSPFRVPIARLAAAQVAV 983 (983)
Q Consensus 905 ~i~~~~p~~~~d~~aV~~lI~~~~~~a~~~~~g~~v~iCGe~a~~p~~~~~l~~lG~~~~Sv~p~~i~~~r~a~a~~~~ 983 (983)
||++.||||.+|+|+|+++|++++++||++++|++||||||+++||.++++|+++|+|+|||+|+++|.+|+|+||+++
T Consensus 798 ~i~~~dp~~~ld~paV~~li~~~~~~~~~~~~g~~vgiCGe~~gdP~~~~~l~~~Gl~~vS~sp~~v~~~rla~a~~~~ 876 (876)
T 1vbg_A 798 GILQHDPFEVLDQRGVGELVKFATERGRKARPNLKVGICGEHGGEPSSVAFFAKAGLDYVSCSPFRVPIARLAAAQVLV 876 (876)
T ss_dssp TSCSSCTTTSCCTTTHHHHHHHHHHHHHHHSTTCEEEEESGGGGSHHHHHHHHHTTCSEEEECGGGHHHHHHHHHHTTC
T ss_pred ccccCCcccccchHHHHHHHHHHHHHHHHhCCCCEEEEcCCcCCCHHHHHHHHHcCCCEEEECcchHHHHHHHHHhhcC
Confidence 9999999999998899999999999999988899999999999999999999999999999999999999999999985
No 3
>1kbl_A PPDK, pyruvate phosphate dikinase; transferase, phosphotransferase; 1.94A {Clostridium symbiosum} SCOP: c.1.12.2 c.8.1.1 d.142.1.5 PDB: 1kc7_A* 1dik_A 1ggo_A 1jde_A 2dik_A 2r82_A 2fm4_A
Probab=100.00 E-value=2.9e-186 Score=1698.07 Aligned_cols=866 Identities=56% Similarity=0.973 Sum_probs=824.3
Q ss_pred ceEEEccCCCccCCccCccccCHHHHhHHHHHhCCCCCCCcEEeCHHHHHHHHHhCcCCchhHHHHHHHHHHHHHHHhcc
Q 039683 111 KRVFTFGKGRSEGNKGMKSLLGGKGANLAEMSTIGLSVPPGLTISTEACQEYQQNGKKLSEGLWEEVLEGLETVEKEMGA 190 (983)
Q Consensus 111 ~~v~~~~~~~~~~~~~~~~lvGgKaanL~~L~~~GlpVP~GFvITt~a~~~fl~~~~~lp~~l~~~i~~~l~~le~~~~~ 190 (983)
+||++| ++++.++..++|||++||++|.+.|+||||||+|||++|++|+++++++|+++|++|.+.|+.++..+++
T Consensus 2 ~~v~~f----~~~~~~~~~~vGGKganL~em~~~glpVP~GF~ITt~a~~~~~~~~~~~p~~l~~~i~~~l~~le~~~~~ 77 (873)
T 1kbl_A 2 KWVYKF----EEGNASMRNLLGGKGCNLAEMTILGMPIPQGFTVTTEACTEYYNSGKQITQEIQDQIFEAITWLEELNGK 77 (873)
T ss_dssp CCEEEG----GGCCGGGHHHHHHHHHHHHHHHHTTCCCCCEEEECHHHHHHHHTTSSCCCHHHHHHHHHHHHHHHHHHTS
T ss_pred CeEEEC----cCCChhhhhhCcHHHHHHHHHHhCCCCCCCEEEEcHHHHHHHHHhcccccHHHHHHHHHHHHHHHHHhcc
Confidence 699999 6888889999999999999999999999999999999999999987789999999999999999999999
Q ss_pred ccCCCCCccchhhcccccccchhHHHHHhcCCCcHHHHHHHHHhcCC-chhHHHHHHHHhhccCcccccCcchHHHHHHH
Q 039683 191 LLGDPSKPLLLSVRSGAAISMPGMMDTVLNLGLNDEVAAGLAEKCGG-RFAYDSYRRFLDMFGDVVMGIPHSLFEEKLEH 269 (983)
Q Consensus 191 ~~g~~~~plllsvrs~a~~s~pg~~~~Il~~~lp~e~~~~l~~~~g~-~~a~d~~~rl~~~~g~~~~~v~~~~f~~~l~~ 269 (983)
.||++.+|++++|||++..||||||++|+|.+||++++++|++.+|+ +||||+|+||+++||+++++|+++.|++.+++
T Consensus 78 ~fg~~~~pl~lsvRS~a~~SmpGm~dtiLn~~l~d~~~~~l~~~~g~~~fa~d~yrr~~~~~~~v~~~v~~~~f~~~~~~ 157 (873)
T 1kbl_A 78 KFGDTEDPLLVSVRSGARASMPGMMDTILNLGLNDVAVEGFAKKTGNPRFAYDSYRRFIQMYSDVVMEVPKSHFEKIIDA 157 (873)
T ss_dssp CBTCSSSCBCEEEEEECSSCCTTSSCEEEEETCCTTHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHSCCCHHHHHHHHHH
T ss_pred ccCCCCCchhHHHhhccccccccHHHHHHcCCCCHHHHHHHHHhhCCchHHHHHHHHHHhccCCceeeccchhHHHHHHH
Confidence 99999899999999999999999999999999999999999999996 99999999999999999999999999999999
Q ss_pred HHhhcCccccCCCChhhHHHHHHHHHhhhhcc-cCCCCCCChHHHHHHHHHHHHhcCCChhHHHHHHHcCCCCCCCceEE
Q 039683 270 MKEAKGVKLDTDLSASDLKELVKQYKNVYIET-KGEEFPSDPKKQLQLSVKAVFDSWDSPRAIKYRSINQITGLKGTAVN 348 (983)
Q Consensus 270 ~~~~~~vavrSs~~~ED~~~~ag~y~s~~l~v-~G~~~p~d~~~~l~~Aik~v~aS~~s~rA~~YR~~~g~~~~~~maV~ 348 (983)
++.+.++++||++++||+.+|+++|+++|+++ .|.+||+||.+||+.||++||+||||+||+.||+.+|++++.+|||+
T Consensus 158 ~~~~~~v~~ds~~taedl~~~~~~~~~~~~~~~~g~~fp~dp~eqL~~Aik~V~aS~~~~RAi~YR~~~gi~~~~~~AV~ 237 (873)
T 1kbl_A 158 MKEEKGVHFDTDLTADDLKELAEKFKAVYKEAMNGEEFPQEPKDQLMGAVKAVFRSWDNPRAIVYRRMNDIPGDWGTAVN 237 (873)
T ss_dssp HHHHTCCCSGGGCCHHHHHHHHHHHHHHHHTTTTTCCCCCCHHHHHHHHHHHHHHHTTSHHHHHHHHHTTCCGGGCCEEE
T ss_pred HHHhcCcCccCCCCHHHHHHHHHHHHHHHHHhhcCCCCCccHHHHHHHHHHHHHhccCCHHHHHHHHHcCCCchhCceEE
Confidence 99999999999999999999999999999999 89999999999999999999999999999999999999988899999
Q ss_pred EEEcccCCCCCccceEEEEecCCCCCCcceeeEEEEeccccceecccccccchhhhhhcchHHHHHHHHHHHHHHHHhcc
Q 039683 349 IQCMVFGNMGNTSGTGVLFTRNPSTGENKLYGEFLINAQGEDVVAGIRTPEDLNTMKSYMPEAYKELVENCEILERHYKD 428 (983)
Q Consensus 349 VQ~MV~g~~~~~~~sGV~fT~nP~tg~~~~~ge~~i~~~Ge~vVsG~~~pd~~~~~~~~~p~~~~~La~~a~ilE~~~~~ 428 (983)
||+||+||+++.++|||+||+||.||+++.+|+|++||+||+||+|.++|+.|..++...|+.+++|++++..||.||+.
T Consensus 238 VQ~MV~g~~~~~s~sGV~FT~nP~tG~~~~~g~~li~a~GE~VV~G~~tPd~~~~l~~~~p~~~~~L~~~~~~lE~hy~~ 317 (873)
T 1kbl_A 238 VQTMVFGNKGETSGTGVAFTRNPSTGEKGIYGEYLINAQGEDVVAGVRTPQPITQLENDMPDCYKQFMDLAMKLEKHFRD 317 (873)
T ss_dssp EEECCCTTSSTTCEEEEEEEECTTTCCEEEEEEEEESCCHHHHHHTSSCCEEGGGHHHHCHHHHHHHHHHHHHHHHHHTS
T ss_pred EEEcccCCCCCceeEEEEEecCCCCCCcccceEEEecCCchhhhcCCcCchhhhhhcccCHHHHHHHHHHHHHHHHHcCC
Confidence 99999999999999999999999999999999999999999999999999999888878899999999999999999999
Q ss_pred ccCcccccccCcEEEEEeecccccHHHHHHHHHHHHHhhhcchHHHhhccChHhhhhhcCCCCCCCcccchhhhhcCCCC
Q 039683 429 MMDIEFTVQENRLWMLQCRSGKRTGKAAVKIAVDMVNEGLVDTRAAVKMVEPQHLDQLLHPQFEDPSAYKDKVVATGLPA 508 (983)
Q Consensus 429 ~qDiEf~~~~~~l~ILQ~Rp~~~~a~~Av~~a~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~vl~~G~~~ 508 (983)
||||||+++++++||||+||.++++.++++++++++.+|+++.+++++++.+.+++++++|.+.........++.+|+++
T Consensus 318 pqDIEfti~~g~L~iLQtRp~krt~~a~~~ia~~lv~eg~i~~~~~~~~~~~~~l~~ll~~~~~~~~~~~~~~l~~G~~a 397 (873)
T 1kbl_A 318 MQDMEFTIEEGKLYFLQTRNGKRTAPAALQIACDLVDEGMITEEEAVVRIEAKSLDQLLHPTFNPAALKAGEVIGSALPA 397 (873)
T ss_dssp CEEEEEEEETTEEEEEEEEECCCCHHHHHHHHHHHHHTTSSCHHHHHHHSCGGGGGGGGSCEECHHHHHHSCEEEECEEE
T ss_pred CeEEEEEEECCEEEEEEecccccchHHHHHHHHHHHHcCCCChHHHHhhCCHHHHHHHhccccchhhccccceeccCccc
Confidence 99999999999999999999999999999999999999999999999999999999999987652111123578899999
Q ss_pred CCCcEEEEEEcChhHHHHHHhcCCCeEEEecCCCcchHhhhhhhceEEEccCCccchHHHhhcccCceEEeccCcccccc
Q 039683 509 SPGAAVGQVVFSAEDAEAWHAQGKSAILVRTETSPEDIGGMHAAAGILTARGGMTSHAAVVARGWGKCCVSGCSDIRVND 588 (983)
Q Consensus 509 s~G~a~G~v~~~~~~~~~~~~~~~~~ILV~~~~~P~~~~~l~~a~GiVt~~Gg~tSHaAIvAR~lgIP~VvGv~~~~~~~ 588 (983)
|+|+++|+|+++.+++..+.+.++++|||+++|+|+|++.|+++.||||+.||+|||+|||||+||||||+||+++.++.
T Consensus 398 s~G~a~G~vv~~~~~a~~~~~~g~~~ILV~~~t~P~~~~~~~~a~GivT~~GG~tSHaAIvAR~lGiP~VvG~~~~~i~~ 477 (873)
T 1kbl_A 398 SPGAAAGKVYFTADEAKAAHEKGERVILVRLETSPEDIEGMHAAEGILTVRGGMTSHAAVVARGMGTCCVSGCGEIKINE 477 (873)
T ss_dssp ECSEEEEEEESSHHHHHHHHHTTCCEEEEESSCCGGGHHHHHHCSEEEESSCCTTSHHHHHHHHHTCEEEECCTTCEEET
T ss_pred cCceEEEEEEEcHHHHHHhhccCCCEEEEECCCCHHHHHHHHhccEEEecCCCCccHHHHHHhHcCCCEEEcCCCceecc
Confidence 99999999999888777666678899999999999999999999999999999999999999999999999999999999
Q ss_pred CCceEEeccEEeeCCCEEEEECCccEEEEcCCCCCCCCccchHHHHHHHhhhhhceEEEecCCChHhHHHHHHcCCCccc
Q 039683 589 NEKSIVVGDMVISEGDWLSLNGSTGEVILGKQPLAPPAMSGDLEIFMSWADEIRRLKVMANADTPDDALTARNNGAQGIG 668 (983)
Q Consensus 589 ~~~~~~~~~~~l~~G~~VtlDg~~G~V~~g~~~~~~~~~~~~~~~~~~~~~~~~~i~v~aNi~~p~d~~~a~~~ga~GIG 668 (983)
..|++++++..+++||+|||||++|.||.|+.+...+....++..++.|.+..++++|++|+++|+|+..+.++||+|||
T Consensus 478 ~~~~~~~~~~~l~~G~~vtvDG~~G~V~~g~~~~~~~~~~~~~~~l~~~~~~~~~~~v~aN~~~p~da~~a~~~ga~GIG 557 (873)
T 1kbl_A 478 EAKTFELGGHTFAEGDYISLDGSTGKIYKGDIETQEASVSGSFERIMVWADKFRTLKVRTNADTPEDTLNAVKLGAEGIG 557 (873)
T ss_dssp TTTEEEETTEEEETTCEEEEETTTCEEEESCCCEECCCCCHHHHHHHHHHHHHCCSEEEEECCSHHHHHHHHHTTCCSEE
T ss_pred cccEEEeCCeeecCCCEEEEECCCCEEEECCChhhhhhhhHHHHHHHHhhccceEEEEEEecCCHHHHHHHHhCCCccee
Confidence 99999999999999999999999999999998876666666677888898887889999999999999999999999999
Q ss_pred cchhhhhhcccchhhHHHHHHhhcCCHHHHHHHHHhhchhHHHHHHHHHHHcCCCcEEEEecCCCCCCCCCCCchHHHHH
Q 039683 669 LCRTEHMFFASDERIKAVRKMIMAVTPEQRKAALDLLLPYQRSDFEGIFRAMDGLPVTIRLLDPPLHEFLPEGDLEQIVN 748 (983)
Q Consensus 669 L~RTE~~f~~~~~~~p~v~~~~~~~~ee~~~~~l~~l~~~q~~~y~~i~~a~~~~pVtiR~lD~~~~eflp~~~~~~~~~ 748 (983)
|||||||||+.+ ++|.+++||+..++++|+++|++|+++|+++|++|+++|.|+||||||||+|+|||||+. ++.++
T Consensus 558 L~RtE~mf~~~~-~~~~~~~mi~~~~~~~r~~~l~~l~~~q~~~y~~i~~a~~~~pV~iR~lD~pl~eflp~~--~~~~~ 634 (873)
T 1kbl_A 558 LCRTEHMFFEAD-RIMKIRKMILSDSVEAREEALNELIPFQKGDFKAMYKALEGRPMTVRYLDPPLHEFVPHT--EEEQA 634 (873)
T ss_dssp EECCTHHHHSHH-HHHHHHHHHHCCSHHHHHHHHHTTHHHHHHHHHHHHHHHTTCCEEEECCCSCGGGGSCCS--HHHHH
T ss_pred ehhhHHHHhhcc-cCCCHHHHhhcCchhhHHHHHHHHHHHHHHHHHHHHHHcCCCcEEEEecCCcccccccch--HHHHH
Confidence 999999999987 899999999999999999999999999999999999999999999999999999999984 67788
Q ss_pred HHHHHcCCChhhhhhhhhccccCCCCCCCccccccCCChHHHHHHHHHHHHHHHHcccc-CCccCcEEEeecCCCHHHHH
Q 039683 749 ELTLETGMSEDEVFSRIEKLSEVNPMLGFRGCRLGISYPELTEMQVRAIFQAAVSMSNH-RFKVFPEIMVPLVGTPQELG 827 (983)
Q Consensus 749 ~~~~~~G~~~dk~~~~~~~~~E~NP~LG~RGiR~~l~~p~i~~~QlrAi~rAa~~~~~~-g~~~~l~ImiPmV~~~~E~~ 827 (983)
+++++.|+|++|+++++..++|.||||||||||+++.|||+|++|+|||+||+..+.++ |...+++||+|||++++|++
T Consensus 635 ~~a~~~G~dk~~~~~~~~~~~E~NP~LG~RG~Rl~l~~peif~~QlrAi~~Aa~~~~~~~G~~~~~~ImiP~V~t~~E~~ 714 (873)
T 1kbl_A 635 ELAKNMGLTLAEVKAKVDELHEFNPMMGHRGCRLAVTYPEIAKMQTRAVMEAAIEVKEETGIDIVPEIMIPLVGEKKELK 714 (873)
T ss_dssp HHHHHHTCCHHHHHHHHHHHCCSCGGGSSCTHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECSCCSHHHHH
T ss_pred HHHHHcCCCHHHHHHHhcCCcCCCCCcccceeccccCChHHHHHHHHHHHHHHHHHHHhcCCCCCEEEEEecCCCHHHHH
Confidence 99999999998999999999999999999999999999999999999999999988777 87778999999999999999
Q ss_pred HHHHHHHHHHHHHHHHcCCCCCceEEEEEecHHHHHHHHHHHhhCCEEEEcchhhhhhhhcCcCCCccccchhhhccCCC
Q 039683 828 HQISLIRNVATKVFSEMGSSLDYKVGTMIEIPRAALVADEIAKEAEFFSFGTNDLTQMTFGYSRDDVGKFLPVYLSKGIL 907 (983)
Q Consensus 828 ~~~~~~~~~~~~~~~~~g~~~~~~vg~MIEtP~a~~~a~~ia~~~Df~sIGtNDLtq~~la~dR~~~~~~~~~y~~~~i~ 907 (983)
++++.++++++++.++.|.+.++++|+|||||+|++++++||+.+|||||||||||||+||+||+|.+++...|.++||+
T Consensus 715 ~~~~~i~~~~~~~~~~~g~~~~~~vg~MIEtP~a~l~ad~iA~~vdf~siGtNDLtQ~~lg~dR~~~~~~~~~~~~~~i~ 794 (873)
T 1kbl_A 715 FVKDVVVEVAEQVKKEKGSDMQYHIGTMIEIPRAALTADAIAEEAEFFSFGTNDLTQMTFGFSRDDAGKFLDSYYKAKIY 794 (873)
T ss_dssp HHHHHHHHHHHHHHHHHTCCCCCEEEEEECSHHHHHTHHHHTTTCSEEEECHHHHHHHHHTCCHHHHHHHHHHHHHTTSC
T ss_pred HHHHHHHHHHHHHHHhcCCCcCcEEEEEEccHHHHHHHHHHHHhCCEEEECHHHHHHHHhCCCCCchhhhHHHHHhcccc
Confidence 99999999888877667776679999999999999999999999999999999999999999999987789999999999
Q ss_pred CCCCcccCCHHHHHHHHHHHHHHhhhcCCCCeEEEcCCCCCChHHHHHHHHcCCCEEecCCCchHHHHHHhhhhcC
Q 039683 908 QSDPFEVLDQKGVGQLIKIATERGRAARPSLKVGICGEHGGEPSSVAFFAEAGLDYVSCSPFRVPIARLAAAQVAV 983 (983)
Q Consensus 908 ~~~p~~~~d~~aV~~lI~~~~~~a~~~~~g~~v~iCGe~a~~p~~~~~l~~lG~~~~Sv~p~~i~~~r~a~a~~~~ 983 (983)
+.||||.+|+|+|+++|++++++||++++|++||||||+++||.++++|+++|+|+|||+|+++|.+|+|+||+++
T Consensus 795 ~~dp~~~ld~paV~~li~~~~~~~~~~~~g~~vgiCGe~~gdP~~~~~l~~~Gl~~vS~sp~~v~~~rla~a~a~~ 870 (873)
T 1kbl_A 795 ESDPFARLDQTGVGQLVEMAVKKGRQTRPGLKCGICGEHGGDPSSVEFCHKVGLNYVSCSPFRVPIARLAAAQAAL 870 (873)
T ss_dssp SSCTTTSCCTTTHHHHHHHHHHHHHHHCTTCEEEECSGGGGSHHHHHHHHHTTCSEEEECGGGHHHHHHHHHHHHH
T ss_pred ccCchhhhchHHHHHHHHHHHHHHHHhCCCCeEEECCCCCCCHHHHHHHHHcCCCEEEEChhHHHHHHHHHHHHHh
Confidence 9999999998899999999999999988899999999999999999999999999999999999999999999864
No 4
>2x0s_A Pyruvate phosphate dikinase; transferase, tropical parasite; 3.00A {Trypanosoma brucei}
Probab=100.00 E-value=8.6e-178 Score=1640.52 Aligned_cols=868 Identities=57% Similarity=0.958 Sum_probs=810.1
Q ss_pred CcceEEEccCCCccCCccCccccCHHHHhHHHHHhCCCCCCCcEEeCHHHHHHHHHhCcCCchhHHHHHHHHHHHHHHHh
Q 039683 109 TEKRVFTFGKGRSEGNKGMKSLLGGKGANLAEMSTIGLSVPPGLTISTEACQEYQQNGKKLSEGLWEEVLEGLETVEKEM 188 (983)
Q Consensus 109 ~~~~v~~~~~~~~~~~~~~~~lvGgKaanL~~L~~~GlpVP~GFvITt~a~~~fl~~~~~lp~~l~~~i~~~l~~le~~~ 188 (983)
.+|||++|+++..+++.+|.++||||+|||+||.++|+||||||+|||+||++|+++ +.+|+.++++|.+.+..+|..+
T Consensus 3 ~~k~vy~F~~~~~e~~~~~~~LvGGKgAnLgEM~~~GlpVP~GF~iTt~Ay~~fl~~-~~l~~~i~~~l~~~l~~le~~~ 81 (913)
T 2x0s_A 3 AKKWVYYFGGGNADGNKNMKELLGGKGANLAEMVNLGIPVPPGFTITTEACKTYQET-ETIPQEVADQVRENVSRVEKEM 81 (913)
T ss_dssp CCCCEEEECSSSCSSCTTCHHHHHHHHHHHHHHHHTTCCCCCEEEECHHHHHHHHTS-SCCCHHHHHHHHHHHHHHHHHH
T ss_pred CCcEEEECCCCCccCCcchhhhCcHHHHHHHHHHHCcCCCCCCEeehHHHHHHHHHc-CCCcHHHHHHHHHHHHHHHHHh
Confidence 468999999888899999999999999999999999999999999999999999987 4799999999999999999999
Q ss_pred ccccCCCCCccchhhcccccccchhHHHHHhcCCCcHHHHHHHHHhcC--CchhHHHHHHHHhhccCcccccCcchHHHH
Q 039683 189 GALLGDPSKPLLLSVRSGAAISMPGMMDTVLNLGLNDEVAAGLAEKCG--GRFAYDSYRRFLDMFGDVVMGIPHSLFEEK 266 (983)
Q Consensus 189 ~~~~g~~~~plllsvrs~a~~s~pg~~~~Il~~~lp~e~~~~l~~~~g--~~~a~d~~~rl~~~~g~~~~~v~~~~f~~~ 266 (983)
++.||++.+|++++||||++.||||||++|+|.++|+++++++.+.++ ++|+||+|+||+++|++++++++++.|++.
T Consensus 82 ~~~~gd~~~pLl~sVRsga~~smpgmmdtilnlgln~~~v~~l~~~~~~~~~~a~d~Yrr~~~~y~~~v~~v~~~~fe~~ 161 (913)
T 2x0s_A 82 GAKFGDPANPLLFSVRSGAAASMPGMMDTVLNLGLNKVTVDAWVRRAPRLERFVYDSYRRFITMYADIVMQVGREDFEEA 161 (913)
T ss_dssp SCBTTCTTSBCCEEEEEECSCCC----CEEEEETCCHHHHTTTSTTCTTSHHHHHHHHHHHHHHHHHHHHCCCSHHHHHH
T ss_pred hhhhCCccccchheecccccccCCccchhHHhccccHHHHHHHHHhCCCcHHHHHHHHHHHHHHHHHHhcCCChhhHHHH
Confidence 999999999999999999999999999999999999999999988887 499999999999999999999999999999
Q ss_pred HHHHHhhcCccccCCCChhhHHHHHHHHHhhhhcccCCCCCCChHHHHHHHHHHHHhcCCChhHHHHHHHcCCCCCCCce
Q 039683 267 LEHMKEAKGVKLDTDLSASDLKELVKQYKNVYIETKGEEFPSDPKKQLQLSVKAVFDSWDSPRAIKYRSINQITGLKGTA 346 (983)
Q Consensus 267 l~~~~~~~~vavrSs~~~ED~~~~ag~y~s~~l~v~G~~~p~d~~~~l~~Aik~v~aS~~s~rA~~YR~~~g~~~~~~ma 346 (983)
+..++..++++.+++++.+|++.....|+.++.+.+|.+||+||.+||+.||++||+||||+||+.||..+|+++++++|
T Consensus 162 ~~~~~~~rssa~~~dl~~as~a~~~~tyl~v~~~~~g~~fp~d~~~qL~~ai~~vfaSl~t~RAi~YR~~~g~~~~~~la 241 (913)
T 2x0s_A 162 LSRMKERRGTKFDTDLTASDLKELCDGYLELFELKTGCSFPQDPVMQLFAAIKAVFRSWGNPRATIYRRMNNITGLLGTA 241 (913)
T ss_dssp HHHHHHHHTCSCGGGCCHHHHHHHHHHHHHHHHHHSSSCCCCCHHHHHHHHHHHHHHHHHCHHHHTHHHHSCCCCCCCCE
T ss_pred HHHHHHhcCccccccCCHHHHHHHHHHHHHHHHHHhCCCCCcCHHHHHHHHHHHHHHHccCHHHHHHHHhcCCCcccccc
Confidence 99888777888888888888888888899998888999999999999999999999999999999999999999999999
Q ss_pred EEEEEcccCCCCCccceEEEEecCCCCCCcceeeEEEEeccccceecccccccchhh-----------------------
Q 039683 347 VNIQCMVFGNMGNTSGTGVLFTRNPSTGENKLYGEFLINAQGEDVVAGIRTPEDLNT----------------------- 403 (983)
Q Consensus 347 V~VQ~MV~g~~~~~~~sGV~fT~nP~tg~~~~~ge~~i~~~Ge~vVsG~~~pd~~~~----------------------- 403 (983)
|+||.||+|||++.++|||+||+||.||++..+|+|.++|+||+||+|.++||.|..
T Consensus 242 V~VQ~MV~~~~~~~s~SGVmFT~dp~TG~~~~~~~~~~~glGE~VV~G~vtPd~~~~~~~~~~~~~~~~~~k~~~~~~~~ 321 (913)
T 2x0s_A 242 VNVQAMVFGNINDRSATGVAFSRSPSTGENFFFGEYLVNAQGEDVVAGIRTPQQINHSLSLRWAKAHGVGEEERRKRYPS 321 (913)
T ss_dssp EEEEECCCSCSSTTCEEEEEESSCTTTCCSSCEEEEEESCCTTHHHHCSSCCBCSSHHHHHHHHHTTTCCHHHHHHHSCC
T ss_pred eEEEEeeecccCccccceEEEecCCCCCCCcEEEEEccCCcCcccccCCCCCcccccchhhhhhhhcccccccccccccc
Confidence 999999999999999999999999999999999999999999999999999999863
Q ss_pred hhhcchHHHHHHHHHHHHHHHHhccccCcccccccCcEEEEEeecccccHHHHHHHHHHHHHhhhcchHHHhhccChHhh
Q 039683 404 MKSYMPEAYKELVENCEILERHYKDMMDIEFTVQENRLWMLQCRSGKRTGKAAVKIAVDMVNEGLVDTRAAVKMVEPQHL 483 (983)
Q Consensus 404 ~~~~~p~~~~~La~~a~ilE~~~~~~qDiEf~~~~~~l~ILQ~Rp~~~~a~~Av~~a~~~~~~~~~~~~~~~~~~~~~~l 483 (983)
+.+..|+.+++|.+++..+|.||+.+||+||+++++++|+||+|+.++++.++++++++++.+++++.++.+.++++..+
T Consensus 322 ~~~~~p~~~~~l~~~~~~lE~hy~~~qdiE~a~~~g~l~ilq~R~~~~t~~a~~~~avd~~~e~~i~~~~a~~~v~~~~~ 401 (913)
T 2x0s_A 322 MEEAMPENYRLLCDVRKRLENHYRDMQDLEFTVQDGRLWLLQCRNGKRTIHAAVRIAIDMVNEGLISREEAVLRIDPYQV 401 (913)
T ss_dssp HHHHSHHHHHHHHHHHHHHHHHHSSCEEEEEEEETTEEEEEEEEECCCCHHHHHHHHHHHHHTTSSCHHHHHHTSCTTTG
T ss_pred hhhhhHHHHHHHHHHHHHHHHhcCcHHHhHHHhcCCchHHHHhhhccccchhhHHHHHhhhhccccCHHHHHHhcCccch
Confidence 12345778899999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhcCCCCCCCcccchhhhhcCCCCCCCcEEEEEEcChhHHHHHHhcCCCeEEEecCCCcchHhhhhhhceEEEccCCcc
Q 039683 484 DQLLHPQFEDPSAYKDKVVATGLPASPGAAVGQVVFSAEDAEAWHAQGKSAILVRTETSPEDIGGMHAAAGILTARGGMT 563 (983)
Q Consensus 484 ~~l~~~~~~~~~~~~~~vl~~G~~~s~G~a~G~v~~~~~~~~~~~~~~~~~ILV~~~~~P~~~~~l~~a~GiVt~~Gg~t 563 (983)
.+++||.+.........++.+|+++|||+++|+|+++.+++.++.++++++|||+++|+|+|++.|+++.||||++||+|
T Consensus 402 ~~~~~~~~~~~~~~~~~~l~~Gl~aspG~a~G~v~~~~~~~~~~~~~~~g~ILV~~~T~Pd~~p~M~~a~gIvT~~GG~T 481 (913)
T 2x0s_A 402 DHLMHPNLEPGAEKANKPIGRGLAASPGAAVGQVVFDAESAKEWSGRGKKVIMVRLETSPEDLAGMDAACGILTARGGMT 481 (913)
T ss_dssp GGGGCEECCSTTTSSCCCCCBCEEEESSEEEEEEESSHHHHHHHTTTTCCEEEEESSCCTTSHHHHTTSSEEEESSCCTT
T ss_pred hhhcCcccchhhhhcccccccccccCCccceeeEEechhHHHHHhhCCCceEEEcCCCCHHHHHHHHHHHHHHHHccCCC
Confidence 99999988755444557889999999999999999998888888889999999999999999999999999999999999
Q ss_pred chHHHhhcccCceEEeccCccccccCCceEEeccEEeeCCCEEEEECCccEEEEcCCCCCCCCccchHHHHHHHhhhhhc
Q 039683 564 SHAAVVARGWGKCCVSGCSDIRVNDNEKSIVVGDMVISEGDWLSLNGSTGEVILGKQPLAPPAMSGDLEIFMSWADEIRR 643 (983)
Q Consensus 564 SHaAIvAR~lgIP~VvGv~~~~~~~~~~~~~~~~~~l~~G~~VtlDg~~G~V~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 643 (983)
||+|||||+|||||||||++++.+ .++.++++..+++||+||+||++|.||.|..+...+.....+..+..|.++.++
T Consensus 482 SHAAIvAR~LGIPaVVG~~~~~~~--~~~~~~~~~~~~~G~~itvdg~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 559 (913)
T 2x0s_A 482 SHAAVVARGMGKCCVSGCGDMVIR--GKSFKLNGSVFREGDYITIDGSKGLIYAGKLKLRSPDLKGSFQTILQWCQEMKR 559 (913)
T ss_dssp CHHHHHHHTTTCCEEECCTTCEEC--SSCEEETTEEESSSEEEEESSCBCBSCCCCCEECCSGGGGHHHHHHHHHHHHCC
T ss_pred ChHHHHHHHcCCCeecCcchhhhh--cccceeccEEccCCCEEEEcCCcchhhhhhHHHhhHHHHHHHHHHHhhccccce
Confidence 999999999999999999998754 456778889999999999999999999998876666666778888899999999
Q ss_pred eEEEecCCChHhHHHHHHcCCCccccchhhhhhcccchhhHHHHHHhhcCCHHHHHHHHHhhchhHHHHHHHHHHHcCCC
Q 039683 644 LKVMANADTPDDALTARNNGAQGIGLCRTEHMFFASDERIKAVRKMIMAVTPEQRKAALDLLLPYQRSDFEGIFRAMDGL 723 (983)
Q Consensus 644 i~v~aNi~~p~d~~~a~~~ga~GIGL~RTE~~f~~~~~~~p~v~~~~~~~~ee~~~~~l~~l~~~q~~~y~~i~~a~~~~ 723 (983)
++|++|+++|+|+..+.++|||||||||||||||+.+ ++|.+++|++..+.++|++++++|++.|+++|++|+++|.|+
T Consensus 560 ~~v~~N~~~p~da~~a~~~ga~GIGL~RtEf~f~~~~-~~~~~~e~~~~~~~~~r~~~l~~l~~~q~~~~~~i~~a~~~~ 638 (913)
T 2x0s_A 560 LGVRTNADTPADAAKARSFGAEGVGLCRTEHMFFEGS-RINFIREMILADSASGRKAALDKLLPIQRADFVGILRAMRGL 638 (913)
T ss_dssp SEEEEECCSHHHHHHHHTTTCCSEEEEESGGGTSTTH-HHHHHHHHHHCSSHHHHHHHHHTTHHHHHHHHHHHHHHTSSS
T ss_pred eeeeecCCCHHHHHHHHhCCCCCccccchHHHhhccc-cCCcHHHHhhccchhHHHHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 9999999999999999999999999999999999997 899999999998999999999999999999999999999999
Q ss_pred cEEEEecCCCCCCCCCCCchHHHHHHHHHHcCCChhhhhhhhhccccCCCCCCCccccccCCChHHHHHHHHHHHHHHHH
Q 039683 724 PVTIRLLDPPLHEFLPEGDLEQIVNELTLETGMSEDEVFSRIEKLSEVNPMLGFRGCRLGISYPELTEMQVRAIFQAAVS 803 (983)
Q Consensus 724 pVtiR~lD~~~~eflp~~~~~~~~~~~~~~~G~~~dk~~~~~~~~~E~NP~LG~RGiR~~l~~p~i~~~QlrAi~rAa~~ 803 (983)
||||||||+|+|||+|.. .....+++..+|...+|+..++..++|.||||||||||++|.|||+|++|+|||+||+..
T Consensus 639 pV~iRtlD~~~de~lp~~--~~~~~e~~~~~~~~~e~~~~~~~~~~E~NPmLG~RGiR~~l~~peif~~Q~rAi~rA~~~ 716 (913)
T 2x0s_A 639 PVTIRLLDPPLHEFVPHD--AAAQFELAQKLGMPAEKVRNRVNALHELNPMLGHRGCRLGITYPEIYNMQVRAIIEAAIA 716 (913)
T ss_dssp EEEEECCCSCGGGSCCSS--CSSHHHHCCSSSCCTTTTSHHHHSSCCSSGGGSSCHHHHHHHSCHHHHHHHHHHHHHHHH
T ss_pred ceEEEecccccccccCch--hhHHHHHHhhhCCchHHHhhhcccccCCChhhhccchhhhccCcHHHHHHHHHHHHHHHH
Confidence 999999999999999983 222345566677788899999999999999999999999999999999999999999998
Q ss_pred ccccCCccCcEEEeecCCCHHHHHHHHHHHHHHHHHHHHHcCCCCCceEEEEEecHHHHHHHHHHHhhCCEEEEcchhhh
Q 039683 804 MSNHRFKVFPEIMVPLVGTPQELGHQISLIRNVATKVFSEMGSSLDYKVGTMIEIPRAALVADEIAKEAEFFSFGTNDLT 883 (983)
Q Consensus 804 ~~~~g~~~~l~ImiPmV~~~~E~~~~~~~~~~~~~~~~~~~g~~~~~~vg~MIEtP~a~~~a~~ia~~~Df~sIGtNDLt 883 (983)
+.++|...+++||||||++++|++++++.+.++++++..+.|...+++||+|||+|+|++++|+|++++|||||||||||
T Consensus 717 ~~~~~~~~~~~IMiPmV~~~~E~~~~~~~v~~~~~~~~~~~g~~~~~~vG~MiEvPsaal~ad~~a~~~DFfSiGTNDLT 796 (913)
T 2x0s_A 717 VSEEGSSVIPEIMVPLVGKKEELSLIREEVVKTAEAVITKSGKRVHYTVGTMIEVPRAAVTADSIAQKADFFSFGTNDLT 796 (913)
T ss_dssp HHHTTCCCEEEEEETTCCSHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECSHHHHHTHHHHGGGCSEEEECTTHHH
T ss_pred HHHhCCCCcEEEEeeecCCHHHHHHHHHHHHHHHHHHHHhcCCCCCCeEEEEEeHHHHHHHHHHHHHHCCEEEECHhHHH
Confidence 88888777899999999999999999999988887776677877789999999999999999999999999999999999
Q ss_pred hhhhcCcCCCccccchhhhccCCCCCCCcccCCHHHHHHHHHHHHHHhhhcCCCCeEEEcCCCCCChHHHHHHHHcCCCE
Q 039683 884 QMTFGYSRDDVGKFLPVYLSKGILQSDPFEVLDQKGVGQLIKIATERGRAARPSLKVGICGEHGGEPSSVAFFAEAGLDY 963 (983)
Q Consensus 884 q~~la~dR~~~~~~~~~y~~~~i~~~~p~~~~d~~aV~~lI~~~~~~a~~~~~g~~v~iCGe~a~~p~~~~~l~~lG~~~ 963 (983)
|||||+||+|.++|+..|.+++++.+||||++|+++|+++|+.++++||+++++++||||||+++||.++++|+++|+|+
T Consensus 797 Q~tlg~DRd~~~~~~~~y~~~~~~~~dp~~~~~~~~v~~li~~a~~~gr~~~~~i~vgICGE~~gdP~~~~~L~~~Gid~ 876 (913)
T 2x0s_A 797 QMGCGFSRDDAGPFLRHYGNLGIYAQDPFQSIDQEGIGELVRIAVTKGRRVKPMLKMGICGEHGGDPATIGFCHKVGLDY 876 (913)
T ss_dssp HHHHTCCGGGCHHHHHHHHHHTSSSSCTTTSCCTTTHHHHHHHHHHHHHHHSTTCEEEECSGGGGCHHHHHHHHHHTCSE
T ss_pred HHHHHHhcCCchhhhhhhhhccccccCCCchhHHHHHHHHHHHHHHHhhhcCCCCeEEEeCCcccCHHHHHHHHHcCCCE
Confidence 99999999998889999999999999999999988999999999999999888999999999999999999999999999
Q ss_pred EecCCCchHHHHHHhhhhc
Q 039683 964 VSCSPFRVPIARLAAAQVA 982 (983)
Q Consensus 964 ~Sv~p~~i~~~r~a~a~~~ 982 (983)
|||||++||.+|+++||+.
T Consensus 877 ~S~sP~~Vp~~r~a~a~~~ 895 (913)
T 2x0s_A 877 VSCSPFRVPVAIVAAAHAS 895 (913)
T ss_dssp EEECGGGHHHHHHHHHHHH
T ss_pred EEEChHHHHHHHHHHHHHh
Confidence 9999999999999999974
No 5
>2ols_A Phosphoenolpyruvate synthase; MC structural genomics, PSI-2, protein structure initiative, M center for structural genomics, transferase; 2.40A {Neisseria meningitidis}
Probab=100.00 E-value=3.1e-131 Score=1213.37 Aligned_cols=706 Identities=24% Similarity=0.364 Sum_probs=558.3
Q ss_pred cceEEEccCCCccCCccCccccCHHHHhHHHHHh----CCCCCCCcEEeCHHHHHHHHHhCcCCchhHHHHHHHHHHHHH
Q 039683 110 EKRVFTFGKGRSEGNKGMKSLLGGKGANLAEMST----IGLSVPPGLTISTEACQEYQQNGKKLSEGLWEEVLEGLETVE 185 (983)
Q Consensus 110 ~~~v~~~~~~~~~~~~~~~~lvGgKaanL~~L~~----~GlpVP~GFvITt~a~~~fl~~~~~lp~~l~~~i~~~l~~le 185 (983)
.+||+|| ++++.++..++|||++||++|.+ .|+||||||||||++|++|+++ ++++++|.+.++.++
T Consensus 3 ~~~v~~~----~~~~~~~~~~vGGK~anL~em~~~L~~~GlpVP~GF~Itt~a~~~fl~~-----~~l~~~i~~~l~~l~ 73 (794)
T 2ols_A 3 DNYVIWF----ENLRMTDVERVGGKNASLGEMISQLTEKGVRVPGGFATTAEAYRAFLAH-----NGLSERISAALAKLD 73 (794)
T ss_dssp -CCEEEG----GGCCGGGHHHHHHHHHHHHHHHHHHGGGTCCCCCEEEECHHHHHHHHTG-----GGHHHHHHHHHHSCC
T ss_pred CCEEEEC----CcCChhhcccCCHHHHHHHHHHHHHhhCCCCCCCEEEECHHHHHHHHHh-----CChHHHHHHHHHhhc
Confidence 4699999 78888999999999999999987 8999999999999999999987 489999988887664
Q ss_pred HHhccccCCCCCccchhhcccccccchhHHHHHhcCCCcHHHHHHHHHhcCCchhHHHHHHHHhhccCcccccCcchHHH
Q 039683 186 KEMGALLGDPSKPLLLSVRSGAAISMPGMMDTVLNLGLNDEVAAGLAEKCGGRFAYDSYRRFLDMFGDVVMGIPHSLFEE 265 (983)
Q Consensus 186 ~~~~~~~g~~~~plllsvrs~a~~s~pg~~~~Il~~~lp~e~~~~l~~~~g~~~a~d~~~rl~~~~g~~~~~v~~~~f~~ 265 (983)
. .++..+..+++ .++++|++.++|+++.++|. ++|+++.+.||.
T Consensus 74 ~---------~~~~~l~~~~~------~ir~~I~~~~~p~~l~~~i~---------~a~~~l~~~~g~------------ 117 (794)
T 2ols_A 74 V---------EDVAELARVGK------EIRQWILDTPFPEQLDAEIE---------AAWNKMVADAGG------------ 117 (794)
T ss_dssp T---------TSHHHHHHHHH------HHHHHHHTSCCCHHHHHHHH---------HHHHHHHHHTSS------------
T ss_pred c---------cCHHHHHHHHH------HHHHHHHhCCCCHHHHHHHH---------HHHHHHhccccc------------
Confidence 2 22333444443 38999999999999999985 678877766632
Q ss_pred HHHHHHhhcCccccCCCChhhHH--HHHHHHHhhhhcccCCCCCCChHHHHHHHHHHHHhcCCChhHHHHHHHcCCCC-C
Q 039683 266 KLEHMKEAKGVKLDTDLSASDLK--ELVKQYKNVYIETKGEEFPSDPKKQLQLSVKAVFDSWDSPRAIKYRSINQITG-L 342 (983)
Q Consensus 266 ~l~~~~~~~~vavrSs~~~ED~~--~~ag~y~s~~l~v~G~~~p~d~~~~l~~Aik~v~aS~~s~rA~~YR~~~g~~~-~ 342 (983)
.+..++||||+++||+. +|||+|.+ |++++|. ++|+.|||+||+||||+||+.||+.+|+++ .
T Consensus 118 ------~~~~vaVRSSa~~EDl~~~sfAG~~~t-~l~v~g~-------~~l~~Aik~v~aS~~s~RAi~YR~~~gi~~~~ 183 (794)
T 2ols_A 118 ------ADISVAVRSSATAEDLPDASFAGQQET-FLNINGL-------DNVKEAMHHVFASLYNDRAISYRVHKGFEHDI 183 (794)
T ss_dssp ------CCCCEEEEEEECC-------CCSCSCE-EEEECSH-------HHHHHHHHHHHHHTTCHHHHHHHHHHCC--CC
T ss_pred ------cCceEEEecCCChhhhhhhhhhhhhhh-hhcCCCH-------HHHHHHHHHHHHhcCCHHHHHHHHHcCCChHH
Confidence 12468999999999995 57899985 5688885 999999999999999999999999999998 5
Q ss_pred CCceEEEEEcccCCCCCccceEEEEecCCCCCCcceeeEEEEe---ccccceecccccccchhhhh--------------
Q 039683 343 KGTAVNIQCMVFGNMGNTSGTGVLFTRNPSTGENKLYGEFLIN---AQGEDVVAGIRTPEDLNTMK-------------- 405 (983)
Q Consensus 343 ~~maV~VQ~MV~g~~~~~~~sGV~fT~nP~tg~~~~~ge~~i~---~~Ge~vVsG~~~pd~~~~~~-------------- 405 (983)
.+|||+||+||++++ ++|||+||+||.||+++. ++|+ |+||+||+|.++||.|.+.+
T Consensus 184 ~~mAV~VQ~MV~~~~---s~sGV~FT~dP~tG~~~~---~~I~a~~GlGE~vV~G~~tpd~~~v~kp~l~~~~~~i~~~~ 257 (794)
T 2ols_A 184 VALSAGVQRMVRSDS---GASGVMFTLDTESGYDQV---VFVTSSYGLGENVVQGAVNPDEFYVFKPTLKAGKPAILRKT 257 (794)
T ss_dssp CCEEEEEEECCCTTS---SEEEEEESSCTTTCCCSE---EEEEEEESCTHHHHHTSSCCEEEEEEHHHHHTTSCCEEEEE
T ss_pred hCceEEEEEcccCCc---eeEEEEEeCCCCCCCCce---EEEEeccCCCceeecCCcCCcEEEEeccccccCCcceeeee
Confidence 699999999999975 699999999999999864 4455 59999999999999875332
Q ss_pred ----------------------hcch-----------HHHHHHHHHHHHHHHHhccccCcccccccC--cEEEEEeeccc
Q 039683 406 ----------------------SYMP-----------EAYKELVENCEILERHYKDMMDIEFTVQEN--RLWMLQCRSGK 450 (983)
Q Consensus 406 ----------------------~~~p-----------~~~~~La~~a~ilE~~~~~~qDiEf~~~~~--~l~ILQ~Rp~~ 450 (983)
..+| +.+.+|++++..||.||+.||||||+++++ ++||||+||.+
T Consensus 258 ~~~k~~~~~~~~~~~~g~~~~~~~~p~~~~~~~~L~d~~~~~L~~~~~~lE~~yg~pqDIEwai~~~~g~L~iLQaRP~t 337 (794)
T 2ols_A 258 MGSKHIKMIFTDKAEAGKSVTNVDVPEEDRNRFSITDEEITELAHYALTIEKHYGRPMDIEWGRDGLDGKLYILQARPET 337 (794)
T ss_dssp CCCCCEEEEECSCCSSSTTEEEEECCHHHHTSCSSCHHHHHHHHHHHHHHHHHHTSCEEEEEEECTTTCCEEEEEEEECC
T ss_pred ccccceeEEecccccCCCeeEEEeCCHHHhcCCCCCHHHHHHHHHHHHHHHHHcCCCeEEEEEEECCCCeEEEEEecCcc
Confidence 0123 578999999999999999999999999976 99999999986
Q ss_pred ccHHHHHHHHHHHHHhhhcchHHHhhccChHhhhhhcCCCCCCCcccchhhhhcCCCCCCCcEEEEEE--cChhHHHHHH
Q 039683 451 RTGKAAVKIAVDMVNEGLVDTRAAVKMVEPQHLDQLLHPQFEDPSAYKDKVVATGLPASPGAAVGQVV--FSAEDAEAWH 528 (983)
Q Consensus 451 ~~a~~Av~~a~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~vl~~G~~~s~G~a~G~v~--~~~~~~~~~~ 528 (983)
...... .+ ..++++ .+.. ...++.+|+++++|.++|+|+ ++.++. .
T Consensus 338 ~~~~~~---------------~~-------~~l~~~---~~~~----~~~~l~~G~~~~~g~~~G~v~~~~~~~~~---~ 385 (794)
T 2ols_A 338 VKSQEE---------------GN-------RNLRRF---AING----DKTVLCEGRAIGQKVGQGKVRLIKDASEM---D 385 (794)
T ss_dssp ---------------------------------------------------CCBCBC--CCCCCBCBC------------
T ss_pred cccccc---------------cc-------cccccc---ccCc----cccceecccccCCCcceEEEEEecCHHHH---H
Confidence 432110 00 000000 0000 124677999999999999974 554443 3
Q ss_pred hcCCCeEEEecCCCcchHhhhhhhceEEEccCCccchHHHhhcccCceEEeccCccccccCCceEEeccEEeeCCCEEEE
Q 039683 529 AQGKSAILVRTETSPEDIGGMHAAAGILTARGGMTSHAAVVARGWGKCCVSGCSDIRVNDNEKSIVVGDMVISEGDWLSL 608 (983)
Q Consensus 529 ~~~~~~ILV~~~~~P~~~~~l~~a~GiVt~~Gg~tSHaAIvAR~lgIP~VvGv~~~~~~~~~~~~~~~~~~l~~G~~Vtl 608 (983)
..++|.|||+++++|+|++.|.++.||||+.||.|||+||+||++|||||+||++++ ..+++|++|||
T Consensus 386 ~~~~g~ILv~~~~~p~~~~~~~~~~givt~~Gg~tSHaAivar~~giP~vvg~~~~~------------~~~~~G~~v~v 453 (794)
T 2ols_A 386 SVEAGDVLVTDMTDPDWEPVMKRASAIVTNRGGRTCHAAIIARELGIPAVVGCGNAT------------ELLKNGQEVTV 453 (794)
T ss_dssp -----CEEEESCCCGGGSHHHHTCSEEEESSCCTTCHHHHHTTC---CEEECCTTHH------------HHSCSSCCEEC
T ss_pred hcCCCeEEEECCCCHHHHHHHhhCcEEEEcCCCcccHHHHHHhHCCCCEEEcCcchh------------hcccCCCEEEE
Confidence 446789999999999999999999999999999999999999999999999999987 67899999999
Q ss_pred ---ECCccEEEEcCCCCCCCCccchHHHHHHHhhhhhceEEEecCCChHhHHHHHHcCCCccccchhhhhhcccchhhHH
Q 039683 609 ---NGSTGEVILGKQPLAPPAMSGDLEIFMSWADEIRRLKVMANADTPDDALTARNNGAQGIGLCRTEHMFFASDERIKA 685 (983)
Q Consensus 609 ---Dg~~G~V~~g~~~~~~~~~~~~~~~~~~~~~~~~~i~v~aNi~~p~d~~~a~~~ga~GIGL~RTE~~f~~~~~~~p~ 685 (983)
||++|.||.|+.+...... ...|.+. +++.|++|+++|++++.+..+||||||||||||||++.. .
T Consensus 454 ~c~Dg~~G~v~~g~~~~~~~~~------~~~~~~~-~~~~l~~n~~~p~~~~~a~~~gadGIGL~RtE~~~~~~~----~ 522 (794)
T 2ols_A 454 SCAEGDTGFIYAGLLDVQITDV------ALDNMPK-APVKVMMNVGNPELAFSFANLPSEGIGLARMEFIINRQI----G 522 (794)
T ss_dssp CCC--CCCBCEECC------------------CCC-CSSEEEEEECCGGGHHHHHSSCCSEEEEECSHHHHHHTT----C
T ss_pred EecCCCcceEEeCCchhhhhhh------hhhcCCC-ceEEEEEeCCCHHHHHHHHhcCCCeeeeeeeHHHHhhhh----h
Confidence 9999999999975322111 1345444 789999999999999999999999999999999999863 2
Q ss_pred HHHHhhcCCH---HHHHHHHHhhc---h--------hHHHHHHHHHHHcCCCcEEEEecCCCCCCCCCCCchHHHHHHHH
Q 039683 686 VRKMIMAVTP---EQRKAALDLLL---P--------YQRSDFEGIFRAMDGLPVTIRLLDPPLHEFLPEGDLEQIVNELT 751 (983)
Q Consensus 686 v~~~~~~~~e---e~~~~~l~~l~---~--------~q~~~y~~i~~a~~~~pVtiR~lD~~~~eflp~~~~~~~~~~~~ 751 (983)
+++|++.... +++++++++|. + .|++.|++++++|.|+||||||+|+++|||++
T Consensus 523 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~v~~~~~~~~~~~~~~~~~pv~iR~~D~~~~~~~~------------ 590 (794)
T 2ols_A 523 IHPKALLEFDKQDDELKAEITRRIAGYASPVDFYVDKIAEGVATLAASVYPRKTIVRMSDFKSNEYAN------------ 590 (794)
T ss_dssp BCHHHHHTGGGSCHHHHHHHHHHTTTSSSHHHHHHHHHHHHHHHHHHHHTTSEEEEECCCCCHHHHHT------------
T ss_pred hhhhhhhhcccCChHHHHHHHHhhccccchHHHHHHHHHHHHHHHHHHhCCCcEEEEeCCCCchhhHH------------
Confidence 3445432111 23467777774 2 26677789999999999999999999988754
Q ss_pred HHcCCChhhhhhhhhccccCCCCCCCccccccCCCh--HHHHHHHHHHHHHHHHccccCCccCcEEEeecCCCHHHHHHH
Q 039683 752 LETGMSEDEVFSRIEKLSEVNPMLGFRGCRLGISYP--ELTEMQVRAIFQAAVSMSNHRFKVFPEIMVPLVGTPQELGHQ 829 (983)
Q Consensus 752 ~~~G~~~dk~~~~~~~~~E~NP~LG~RGiR~~l~~p--~i~~~QlrAi~rAa~~~~~~g~~~~l~ImiPmV~~~~E~~~~ 829 (983)
+.|+++ ..++|.||||||||||+++.+| |+|++|+|||+||... .|.. +.+||+|||++++|++++
T Consensus 591 -~~gg~~-------~~~~E~NP~lG~Rg~r~~~~~p~~~~~~~ql~Ai~ra~~~---~G~~-~~~ImvP~V~t~~E~~~~ 658 (794)
T 2ols_A 591 -LVGGNV-------YEPHEENPMLGFRGAARYVADNFKDCFALECKALKRVRDE---MGLT-NVEIMIPFVRTLGEAEAV 658 (794)
T ss_dssp -SBTCGG-------GSCCCSCGGGSSCTHHHHHCTTTHHHHHHHHHHHHHHHHT---SCCT-TEEEEECCCCSHHHHHHH
T ss_pred -HhcCcc-------ccccccCCCcCccceeeeeccchhHHHHHHHHHHHHHHHh---cCCC-CceEEecCCCCHHHHHHH
Confidence 356543 3678999999999999999999 9999999999998542 2432 689999999999999998
Q ss_pred HHHHHHHHHHHHHHcCCCC--C-ceEEEEEecHHHHHHHHHHHhhCCEEEEcchhhhhhhhcCcCCCccccchhhhccCC
Q 039683 830 ISLIRNVATKVFSEMGSSL--D-YKVGTMIEIPRAALVADEIAKEAEFFSFGTNDLTQMTFGYSRDDVGKFLPVYLSKGI 906 (983)
Q Consensus 830 ~~~~~~~~~~~~~~~g~~~--~-~~vg~MIEtP~a~~~a~~ia~~~Df~sIGtNDLtq~~la~dR~~~~~~~~~y~~~~i 906 (983)
++.+++ .|... + +++|+|||||+|++++++|++++||||||||||||||||+||+|. .+.+ |
T Consensus 659 ~~~l~~--------~g~~~~~~~~~vg~MIEtp~a~~~ad~ia~~vD~~siGtnDLtq~tlg~~R~~~-~~~~-~----- 723 (794)
T 2ols_A 659 VKALKE--------NGLERGKNGLRLIMMCELPSNAVLAEQFLQYFDGFSIGSNDMTQLTLGLDRDSG-LVSE-S----- 723 (794)
T ss_dssp HHHHHH--------TTCCTTGGGCCEEEEECSHHHHHTHHHHHTTSSEEEEEHHHHHHHHHTCCTTCT-TTGG-G-----
T ss_pred HHHHHh--------cCcccCccCCEEEEEECcHHHHHHHHHHHHhCCEEEECHHHHHHHHhCCCCCcc-hhcc-c-----
Confidence 876543 35443 3 889999999999999999999999999999999999999999997 3333 3
Q ss_pred CCCCCcccCCHHHHHHHHHHHHHHhhhcCCCCeEEEcCCCCC-ChHHHHHHHHcCCCEEecCCCchHHHHHHhhhhc
Q 039683 907 LQSDPFEVLDQKGVGQLIKIATERGRAARPSLKVGICGEHGG-EPSSVAFFAEAGLDYVSCSPFRVPIARLAAAQVA 982 (983)
Q Consensus 907 ~~~~p~~~~d~~aV~~lI~~~~~~a~~~~~g~~v~iCGe~a~-~p~~~~~l~~lG~~~~Sv~p~~i~~~r~a~a~~~ 982 (983)
++|+| |+|+++|++++++||+ +||++|||||+++ ||+.+++|+++|++++||+|+.++.+|++++|..
T Consensus 724 --~~~~~----p~v~~~i~~~v~aar~--~g~~vgicGe~~~~dp~~~~~~~~~G~~~~s~~p~~v~~~~~~~~~~~ 792 (794)
T 2ols_A 724 --FDERN----PAVKVMLHLAISACRK--QNKYVGICGQGPSDHPDFAKWLVEEGIESVSLNPDTVIETWLYLANEL 792 (794)
T ss_dssp --CCTTS----HHHHHHHHHHHHHHHT--TTCEEEEESSHHHHCHHHHHHHHHHTCCEEEECGGGHHHHHHHHHHHC
T ss_pred --cCCCC----HHHHHHHHHHHHHHHH--hCCEEEEecccCCCCHHHHHHHHHCCCCEEEECHhHHHHHHHHHHHHh
Confidence 47777 7999999999999997 5999999999999 9999999999999999999999999999999963
No 6
>2hwg_A Phosphoenolpyruvate-protein phosphotransferase; enzyme I, phosphoenolpyruvate:sugar phosphotransferase system, PTS; HET: NEP; 2.70A {Escherichia coli} PDB: 2kx9_A 2xdf_A 2l5h_A
Probab=100.00 E-value=1.6e-93 Score=845.16 Aligned_cols=457 Identities=25% Similarity=0.360 Sum_probs=403.1
Q ss_pred HHHHHHHHHhccccCcccccccCcEEEEEeecccccHHHHHHHHHHHHHhhhcchHHHhhccChHhhhhhcCCCCCCCcc
Q 039683 417 ENCEILERHYKDMMDIEFTVQENRLWMLQCRSGKRTGKAAVKIAVDMVNEGLVDTRAAVKMVEPQHLDQLLHPQFEDPSA 496 (983)
Q Consensus 417 ~~a~ilE~~~~~~qDiEf~~~~~~l~ILQ~Rp~~~~a~~Av~~a~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~ 496 (983)
+.+.+||.|+.+++|+||+.+..++ +|..+++++||++.+++++.++|.+++++|+++|+.|++++.+|.+.
T Consensus 68 ~~~~i~e~h~~~l~D~~~~~~~~~~----i~~~~~~a~~A~~~~~~~~~~~~~~~~d~ylr~r~~Di~dv~~r~l~---- 139 (575)
T 2hwg_A 68 EKEAIFEGHIMLLEDEELEQEIIAL----IKDKHMTADAAAHEVIEGQASALEELDDEYLKERAADVRDIGKRLLR---- 139 (575)
T ss_dssp HHHHHHHHHHHHHHCHHHHHHHHHH----HHTSCCCHHHHHHHHHHHHHHHHHHSCCHHHHHHHHHHHHHHHHHHH----
T ss_pred HHHHHHHHHHHHhcCHHHHHHHHHH----HHhCCCCHHHHHHHHHHHHHHHHhcCchHHhhcCHHHHHHHHHHHHH----
Confidence 4566999999999999999886554 58778999999999999999999999999999999999999866542
Q ss_pred cchhhhhcCCCCCCCcEEEEEEcChhHHHHHHhcCCCeEEEecCCCcchHhhhh--hhceEEEccCCccchHHHhhcccC
Q 039683 497 YKDKVVATGLPASPGAAVGQVVFSAEDAEAWHAQGKSAILVRTETSPEDIGGMH--AAAGILTARGGMTSHAAVVARGWG 574 (983)
Q Consensus 497 ~~~~vl~~G~~~s~G~a~G~v~~~~~~~~~~~~~~~~~ILV~~~~~P~~~~~l~--~a~GiVt~~Gg~tSHaAIvAR~lg 574 (983)
.| .|.+ +|| +...++++|||+++++|+|+..|+ ++.||||+.||.|||+||+||+||
T Consensus 140 ----~L-~g~~-~~~---------------~~~~~~~~ILVa~~l~Ps~~~~l~~~~~~Givt~~Gg~tSHaAIvAR~lg 198 (575)
T 2hwg_A 140 ----NI-LGLK-IID---------------LSAIQDEVILVAADLTPSETAQLNLKKVLGFITDAGGRTSHTSIMARSLE 198 (575)
T ss_dssp ----HH-TTCC-CCC---------------GGGCCSCEEEEESCCCHHHHHTCCTTTEEEEEESSCCTTSHHHHHHHHTT
T ss_pred ----Hh-cCCC-Ccc---------------cccCCCCEEEEEcCCCHHHHHHhCccceeEEEEcCCCcccHHHHHHHHCC
Confidence 23 5654 443 234678999999999999999998 599999999999999999999999
Q ss_pred ceEEeccCccccccCCceEEeccEEeeCCCEEEEECCccEEEEcCCCCCCCCccc-------hHHHHHHHhhhh------
Q 039683 575 KCCVSGCSDIRVNDNEKSIVVGDMVISEGDWLSLNGSTGEVILGKQPLAPPAMSG-------DLEIFMSWADEI------ 641 (983)
Q Consensus 575 IP~VvGv~~~~~~~~~~~~~~~~~~l~~G~~VtlDg~~G~V~~g~~~~~~~~~~~-------~~~~~~~~~~~~------ 641 (983)
||||||+++++ ..+++|++|+|||++|.||.||.+...+.|.. ....+..|.+..
T Consensus 199 IPaVvG~~~~~------------~~~~~G~~v~vDg~~G~V~~~p~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~T~DG 266 (575)
T 2hwg_A 199 LPAIVGTGSVT------------SQVKNDDYLILDAVNNQVYVNPTNEVIDKMRAVQEQVASEKAELAKLKDLPAITLDG 266 (575)
T ss_dssp CCEEECCSCHH------------HHCCTTCEEEEETTTTEEEESCCHHHHHHHHHHHHHHHHHHHHHGGGTTSCCBCTTS
T ss_pred CCEEEcchhHH------------hhCCCCCEEEEECCCCEEEeCCchhhHHHHHHHHHHHHHHHHHHHHhCCCCcccCCC
Confidence 99999999987 56899999999999999999998765544432 223344454433
Q ss_pred hceEEEecCCChHhHHHHHHcCCCccccchhhhhhcccchhhHHHHHHhhcCCHHHHHHHHHhhchhHHHHHHHHHHHcC
Q 039683 642 RRLKVMANADTPDDALTARNNGAQGIGLCRTEHMFFASDERIKAVRKMIMAVTPEQRKAALDLLLPYQRSDFEGIFRAMD 721 (983)
Q Consensus 642 ~~i~v~aNi~~p~d~~~a~~~ga~GIGL~RTE~~f~~~~~~~p~v~~~~~~~~ee~~~~~l~~l~~~q~~~y~~i~~a~~ 721 (983)
+++.+++|+++|++++.+..+|+|||||||||||||+.+ ++| ++++ |++.|.+++++|.
T Consensus 267 ~~~~l~an~~~p~d~~~a~~~GadGVGL~RTE~l~ld~e-~~P---------~~~~-----------q~~~~~~~~~~~~ 325 (575)
T 2hwg_A 267 HQVEVCANIGTVRDVEGAERNGAEGVGLYRTEFLFMDRD-ALP---------TEEE-----------QFAAYKAVAEACG 325 (575)
T ss_dssp CBCEEEEEESSTHHHHHHHHTTCSSEEEEEHHHHHTTSS-SCC---------CHHH-----------HHHHHHHHHHHTT
T ss_pred CEEEEEEeCCCHHHHHHHHhcCCCeeeeeeehheecccc-cCC---------CHHH-----------HHHHHHHHHHHcC
Confidence 679999999999999999999999999999999999987 555 6654 8999999999999
Q ss_pred CCcEEEEecCCCCCCCCCCCchHHHHHHHHHHcCCChhhhhhhhhccccCCCCCCCccccccCCChHHHHHHHHHHHHHH
Q 039683 722 GLPVTIRLLDPPLHEFLPEGDLEQIVNELTLETGMSEDEVFSRIEKLSEVNPMLGFRGCRLGISYPELTEMQVRAIFQAA 801 (983)
Q Consensus 722 ~~pVtiR~lD~~~~eflp~~~~~~~~~~~~~~~G~~~dk~~~~~~~~~E~NP~LG~RGiR~~l~~p~i~~~QlrAi~rAa 801 (983)
|+||||||+|+|+| |.++|+..++|.||||||||||+++.+|++|++|+|||+||+
T Consensus 326 g~pv~VRtlD~g~D------------------------k~l~~~~~~~E~NP~LG~RgiRl~l~~p~if~~QlrAi~rA~ 381 (575)
T 2hwg_A 326 SQAVIVRTMDIGGD------------------------KELPYMNFPKEENPFLGWRAIRIAMDRREILRDQLRAILRAS 381 (575)
T ss_dssp TCCEEEECCCCSSS------------------------CCCGGGCCCCCSCGGGSSCTHHHHTTCHHHHHHHHHHHHHHT
T ss_pred CCceEEEeCCCCCc------------------------cchhhccCCCCCCccccchheeecccChHHHHHHHHHHHHHH
Confidence 99999999999744 556777888999999999999999999999999999999996
Q ss_pred HHccccCCccCcEEEeecCCCHHHHHHHHHHHHHHHHHHHHHcCCCC--CceEEEEEecHHHHHHHHHHHhhCCEEEEcc
Q 039683 802 VSMSNHRFKVFPEIMVPLVGTPQELGHQISLIRNVATKVFSEMGSSL--DYKVGTMIEIPRAALVADEIAKEAEFFSFGT 879 (983)
Q Consensus 802 ~~~~~~g~~~~l~ImiPmV~~~~E~~~~~~~~~~~~~~~~~~~g~~~--~~~vg~MIEtP~a~~~a~~ia~~~Df~sIGt 879 (983)
. .++++||+|||++++|++++++.++.++.++. +.|.++ .+++|+|||||+|++++++|++++|||||||
T Consensus 382 ~-------~G~~~Im~PmV~t~~E~~~a~~~v~~~~~~l~-~~G~~~~~~~~vg~MIE~P~a~~~ad~ia~~vDf~siGt 453 (575)
T 2hwg_A 382 A-------FGKLRIMFPMIISVEEVRALRKEIEIYKQELR-DEGKAFDESIEIGVMVETPAAATIARHLAKEVDFFSIGT 453 (575)
T ss_dssp T-------SSCEEEEESSCCCHHHHHHHHHHHHHHHHHHH-HTTCCCCTTCEEEEEECSHHHHHTHHHHHTTCSEEEECH
T ss_pred h-------cCCCEEEEeCCCCHHHHHHHHHHHHHHHHHHH-hcCCCCCCCcEEEEEECcHHHHHHHHHHHHhCCEEEECH
Confidence 5 24789999999999999999999988887764 567766 5899999999999999999999999999999
Q ss_pred hhhhhhhhcCcCCCccccchhhhccCCCCCCCcccCCHHHHHHHHHHHHHHhhhcCCCCeEEEcCCCCCChHHHHHHHHc
Q 039683 880 NDLTQMTFGYSRDDVGKFLPVYLSKGILQSDPFEVLDQKGVGQLIKIATERGRAARPSLKVGICGEHGGEPSSVAFFAEA 959 (983)
Q Consensus 880 NDLtq~~la~dR~~~~~~~~~y~~~~i~~~~p~~~~d~~aV~~lI~~~~~~a~~~~~g~~v~iCGe~a~~p~~~~~l~~l 959 (983)
||||||+||+||+|. .+... +||+| |+|+++|++++++|++ +||++|||||+++||..+++|+++
T Consensus 454 NDLtqy~la~dR~~~-~l~~~--------~dp~~----paVl~li~~vv~aa~~--~g~~vgvCGe~agdp~~~~~l~~l 518 (575)
T 2hwg_A 454 NDLTQYTLAVDRGND-MISHL--------YQPMS----PSVLNLIKQVIDASHA--EGKWTGMCGELAGDERATLLLLGM 518 (575)
T ss_dssp HHHHHHHHTCCTTCG-GGGGG--------CCSSS----HHHHHHHHHHHHHHHH--TTCEEEECSTTTTCTTTHHHHHHT
T ss_pred HHHHHHHhCcCCCcc-ccccc--------cCCCC----HHHHHHHHHHHHHHHH--hCCeEEEeCCCCCCHHHHHHHHHC
Confidence 999999999999997 34433 58998 7999999999999998 599999999999999999999999
Q ss_pred CCCEEecCCCchHHHHHHhhhhc
Q 039683 960 GLDYVSCSPFRVPIARLAAAQVA 982 (983)
Q Consensus 960 G~~~~Sv~p~~i~~~r~a~a~~~ 982 (983)
|+++|||+|+.++.+|.+.+|+.
T Consensus 519 G~~~~S~~p~~v~~~~~~~~~~~ 541 (575)
T 2hwg_A 519 GLDEFSMSAISIPRIKKIIRNTN 541 (575)
T ss_dssp TCCEEEECGGGHHHHHHHHHTSC
T ss_pred CCCEEEECccHHHHHHHHHHhcC
Confidence 99999999999999999999863
No 7
>2wqd_A Phosphoenolpyruvate-protein phosphotransferase; kinase, cytoplasm, transport, magnesium, PEP- utilising enzyme, phosphotransferase system; 2.40A {Staphylococcus aureus} PDB: 2hro_A
Probab=100.00 E-value=8.6e-93 Score=838.61 Aligned_cols=456 Identities=26% Similarity=0.385 Sum_probs=400.5
Q ss_pred HHHHHHHHhccccCcccccccCcEEEEEeecccccHHHHHHHHHHHHHhhhcchHHHhhccChHhhhhhcCCCCCCCccc
Q 039683 418 NCEILERHYKDMMDIEFTVQENRLWMLQCRSGKRTGKAAVKIAVDMVNEGLVDTRAAVKMVEPQHLDQLLHPQFEDPSAY 497 (983)
Q Consensus 418 ~a~ilE~~~~~~qDiEf~~~~~~l~ILQ~Rp~~~~a~~Av~~a~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~ 497 (983)
.+.+||.|+.+++|+||+.+..++ +|..+++++|||+.+++++.++|.+++++|+++|+.|++++.++.+.
T Consensus 71 ~~~i~e~h~~~l~D~~~~~~~~~~----i~~~~~~a~~A~~~~~~~~~~~~~~~~d~ylr~r~~Di~dv~~r~l~----- 141 (572)
T 2wqd_A 71 KAAIFDAHLLVLDDPELIQPIQDK----IKNENANAATALTDVTTQFVTIFESMDNEYMKERAADIRDVSKRVLS----- 141 (572)
T ss_dssp TTHHHHHHHHHTTCHHHHHHHHHH----HHHHCCCHHHHHHHHHHHHHHHHHSSSCHHHHHHHHHHHHHHHHHHH-----
T ss_pred HHHHHHHHHHHhcCHHHHHHHHHH----HHhCCCCHHHHHHHHHHHHHHHHhcCCchHhhCCHHHHHHHHHHHHH-----
Confidence 345899999999999999886554 57778999999999999999999999999999999999999865442
Q ss_pred chhhhhcCCCCCCCcEEEEEEcChhHHHHHHhcCCCeEEEecCCCcchHhhhhh--hceEEEccCCccchHHHhhcccCc
Q 039683 498 KDKVVATGLPASPGAAVGQVVFSAEDAEAWHAQGKSAILVRTETSPEDIGGMHA--AAGILTARGGMTSHAAVVARGWGK 575 (983)
Q Consensus 498 ~~~vl~~G~~~s~G~a~G~v~~~~~~~~~~~~~~~~~ILV~~~~~P~~~~~l~~--a~GiVt~~Gg~tSHaAIvAR~lgI 575 (983)
.| .|.+ +|| +...++++|||+++++|+|+..|++ +.||||+.||.|||+||+||+|||
T Consensus 142 ---~L-~g~~-~~~---------------~~~~~~~~ILVa~~l~P~~~~~l~~~~~~Givt~~Gg~tSHaAIvAR~lgI 201 (572)
T 2wqd_A 142 ---HI-LGVE-LPN---------------PSMIDESVVIVGNDLTPSDTAQLNKEFVQGFATNIGGRTSASAIMSRSLEI 201 (572)
T ss_dssp ---HH-TTCC-CCC---------------CCCCSCCEEEEESCCCHHHHTTCCTTTEEEEEESSCCTTSHHHHHHHHTTC
T ss_pred ---Hh-cCCC-Ccc---------------cccCCCCEEEEEcCCCHHHHHhhChhceeEEEEcCCCcccHHHHHHHHcCC
Confidence 23 5654 443 1235688999999999999999984 999999999999999999999999
Q ss_pred eEEeccCccccccCCceEEeccEEeeCCCEEEEECCccEEEEcCCCCCCCCccc-------hHHHHHHHhhhh------h
Q 039683 576 CCVSGCSDIRVNDNEKSIVVGDMVISEGDWLSLNGSTGEVILGKQPLAPPAMSG-------DLEIFMSWADEI------R 642 (983)
Q Consensus 576 P~VvGv~~~~~~~~~~~~~~~~~~l~~G~~VtlDg~~G~V~~g~~~~~~~~~~~-------~~~~~~~~~~~~------~ 642 (983)
|||||+++++ ..+++|++|+|||++|.||.||.+...+.|.. ....+..|.+.. +
T Consensus 202 PaVvg~~~~~------------~~~~~G~~v~vDg~~G~V~~~p~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~T~DG~ 269 (572)
T 2wqd_A 202 PAIVGTKSIT------------QEVKQGDMIIVDGLNGDVIVNPTEDELIAYQDKRERYFADKKELQKLRDADTVTVDGV 269 (572)
T ss_dssp CEEECCSSHH------------HHCCTTCEEEEETTTTEEEESCCHHHHHHHHHHHHHHHHHHHHHHTTTTSCCBCTTSC
T ss_pred CEEEechhHH------------hhCCCCCEEEEECCCCEEEeCCchhHHHHHHHHHHHHHHHHHHHHHhCCCCCcccCCC
Confidence 9999999987 56899999999999999999998765544421 223344454433 6
Q ss_pred ceEEEecCCChHhHHHHHHcCCCccccchhhhhhcccchhhHHHHHHhhcCCHHHHHHHHHhhchhHHHHHHHHHHHcCC
Q 039683 643 RLKVMANADTPDDALTARNNGAQGIGLCRTEHMFFASDERIKAVRKMIMAVTPEQRKAALDLLLPYQRSDFEGIFRAMDG 722 (983)
Q Consensus 643 ~i~v~aNi~~p~d~~~a~~~ga~GIGL~RTE~~f~~~~~~~p~v~~~~~~~~ee~~~~~l~~l~~~q~~~y~~i~~a~~~ 722 (983)
++.+++|+++|++++.+..+|+|||||||||||||+.+ ++| ++++ |++.|.+++++|.|
T Consensus 270 ~i~l~an~~~p~~~~~a~~~GadgVGL~RtE~l~ld~e-~~P---------~~~~-----------q~~~~~~~~~~~~g 328 (572)
T 2wqd_A 270 HAELAANIGTPNDLPGVIENGAQGIGLYRTEFLYMGRD-QMP---------TEEE-----------QFEAYKEVLEAMGG 328 (572)
T ss_dssp BCEEEEEESSGGGHHHHHHTTCSCEEEEECHHHHSSSS-SCC---------CHHH-----------HHHHHHHHHHHTTT
T ss_pred eeeeeeccCCHHHHHHHHhCCCCeEEEeeccccccCcc-cCC---------CHHH-----------HHHHHHHHHHHcCC
Confidence 79999999999999999999999999999999999987 555 6654 89999999999999
Q ss_pred CcEEEEecCCCCCCCCCCCchHHHHHHHHHHcCCChhhhhhhhhccccCCCCCCCccccccCCChHHHHHHHHHHHHHHH
Q 039683 723 LPVTIRLLDPPLHEFLPEGDLEQIVNELTLETGMSEDEVFSRIEKLSEVNPMLGFRGCRLGISYPELTEMQVRAIFQAAV 802 (983)
Q Consensus 723 ~pVtiR~lD~~~~eflp~~~~~~~~~~~~~~~G~~~dk~~~~~~~~~E~NP~LG~RGiR~~l~~p~i~~~QlrAi~rAa~ 802 (983)
+||||||+|+|.| |.++|+..++|.||||||||||++|.+|++|++|+|||+||+.
T Consensus 329 ~pv~VR~lD~g~D------------------------k~l~~~~~~~E~NP~LG~RgiRl~l~~p~if~~QlrAi~rA~~ 384 (572)
T 2wqd_A 329 KRVVVRTLDIGGD------------------------KELSYLNLPEEMNPFLGYRAIRLSLAQQDIFRPQLRALLRASV 384 (572)
T ss_dssp CCEEEECCCCCTT------------------------SCCTTSCCCCCSCGGGSSCHHHHHTTCHHHHHHHHHHHHHHTT
T ss_pred CcEEEEECCCCCc------------------------cchhhccCcccCCchhhhhhhhhcccChHHHHHHHHHHHHHHh
Confidence 9999999999754 4566777889999999999999999999999999999999964
Q ss_pred HccccCCccCcEEEeecCCCHHHHHHHHHHHHHHHHHHHHHcCCCC--CceEEEEEecHHHHHHHHHHHhhCCEEEEcch
Q 039683 803 SMSNHRFKVFPEIMVPLVGTPQELGHQISLIRNVATKVFSEMGSSL--DYKVGTMIEIPRAALVADEIAKEAEFFSFGTN 880 (983)
Q Consensus 803 ~~~~~g~~~~l~ImiPmV~~~~E~~~~~~~~~~~~~~~~~~~g~~~--~~~vg~MIEtP~a~~~a~~ia~~~Df~sIGtN 880 (983)
.++++||+|||++++|++++++.+++++.++. +.|.++ ++++|+|||||+|++++++|++++||||||||
T Consensus 385 -------~G~~~Im~PmV~s~~E~~~a~~~v~~~~~~l~-~~G~~~~~~~~vg~MIE~P~a~~~ad~ia~~vDf~siGtN 456 (572)
T 2wqd_A 385 -------YGKLNIMFPMVATINEFREAKAILLEEKENLK-NEGHDISDDIELGIMVEIPATAALADVFAKEVDFFSIGTN 456 (572)
T ss_dssp -------TSCEEEEESCCCSHHHHHHHHHHHHHHHHHHH-HHTCCCCSCCEEEEEECCHHHHHTHHHHHHHCSEEEECHH
T ss_pred -------cCCCEEEEeCCCCHHHHHHHHHHHHHHHHHHH-hcCCCCCCCcEEEEEEccHHHHHHHHHHHHhCCEEEECHH
Confidence 24789999999999999999999988877763 567765 58999999999999999999999999999999
Q ss_pred hhhhhhhcCcCCCccccchhhhccCCCCCCCcccCCHHHHHHHHHHHHHHhhhcCCCCeEEEcCCCCCChHHHHHHHHcC
Q 039683 881 DLTQMTFGYSRDDVGKFLPVYLSKGILQSDPFEVLDQKGVGQLIKIATERGRAARPSLKVGICGEHGGEPSSVAFFAEAG 960 (983)
Q Consensus 881 DLtq~~la~dR~~~~~~~~~y~~~~i~~~~p~~~~d~~aV~~lI~~~~~~a~~~~~g~~v~iCGe~a~~p~~~~~l~~lG 960 (983)
|||||+||+||+|. .+... +||+| |+|+++|++++++|++ +||++|||||++++|..+++|+++|
T Consensus 457 DLtQ~~lg~dR~~~-~v~~~--------~dp~~----paVl~li~~vv~aa~~--~g~~vgiCGe~agdp~~~~~l~~lG 521 (572)
T 2wqd_A 457 DLIQYTLAADRMSE-RVSYL--------YQPYN----PSILRLVKQVIEASHK--EGKWTGMCGEMAGDETAIPLLLGLG 521 (572)
T ss_dssp HHHHHHHTCCSSSG-GGGGG--------CCTTC----HHHHHHHHHHHHHHHH--TTCEEEECSGGGGCTTTHHHHHHHT
T ss_pred HHHHHHhccCCCcc-ccccc--------cCCCC----HHHHHHHHHHHHHHHH--hCCeEEEeCCccCCHHHHHHHHHCC
Confidence 99999999999997 34433 58988 7999999999999998 5999999999999999999999999
Q ss_pred CCEEecCCCchHHHHHHhhhhc
Q 039683 961 LDYVSCSPFRVPIARLAAAQVA 982 (983)
Q Consensus 961 ~~~~Sv~p~~i~~~r~a~a~~~ 982 (983)
++++||+|+.++.+|.+.+|+.
T Consensus 522 ~~~~S~~p~~v~~~k~~~~~~~ 543 (572)
T 2wqd_A 522 LDEFSMSATSILKARRQINGLS 543 (572)
T ss_dssp CCEEEECHHHHHHHHHHHHTCC
T ss_pred CCEEEeccchHHHHHHHHHHcC
Confidence 9999999999999999999863
No 8
>2xz9_A Phosphoenolpyruvate-protein kinase (PTS system EI component in bacteria); thermophilic, PEP-utilising enzyme, transferase; 1.68A {Thermoanaerobacter tengcongensis} PDB: 2bg5_A 2xz7_A*
Probab=100.00 E-value=7.1e-60 Score=525.45 Aligned_cols=274 Identities=32% Similarity=0.531 Sum_probs=247.0
Q ss_pred hhceEEEecCCChHhHHHHHHcCCCccccchhhhhhcccchhhHHHHHHhhcCCHHHHHHHHHhhchhHHHHHHHHHHHc
Q 039683 641 IRRLKVMANADTPDDALTARNNGAQGIGLCRTEHMFFASDERIKAVRKMIMAVTPEQRKAALDLLLPYQRSDFEGIFRAM 720 (983)
Q Consensus 641 ~~~i~v~aNi~~p~d~~~a~~~ga~GIGL~RTE~~f~~~~~~~p~v~~~~~~~~ee~~~~~l~~l~~~q~~~y~~i~~a~ 720 (983)
.+++.+++|+++|++++.+..+|+||||||||||||++.+ +.| ++++ |++.|.+++++|
T Consensus 17 g~~~~l~~n~~~p~~~~~a~~~GadgVGL~RtE~l~ld~e-~~p---------~~~~-----------q~~~~~~~~~~~ 75 (324)
T 2xz9_A 17 GKKVMLAANIGTPKDVASALANGAEGVGLFRTEFLYMDRN-SLP---------SEEE-----------QFEAYKEVVEKM 75 (324)
T ss_dssp SCEEEEEEEESSGGGHHHHHHTTCSSEEEECCGGGTSSSS-SCC---------CHHH-----------HHHHHHHHHHHT
T ss_pred CCEEEEEEECCCHHHHHHHHhCCCCeEeehhhhhhhccCC-CCC---------CHHH-----------HHHHHHHHHHHh
Confidence 4678999999999999999999999999999999999987 555 6654 889999999999
Q ss_pred CCCcEEEEecCCCCCCCCCCCchHHHHHHHHHHcCCChhhhhhhhhccccCCCCCCCccccccCCChHHHHHHHHHHHHH
Q 039683 721 DGLPVTIRLLDPPLHEFLPEGDLEQIVNELTLETGMSEDEVFSRIEKLSEVNPMLGFRGCRLGISYPELTEMQVRAIFQA 800 (983)
Q Consensus 721 ~~~pVtiR~lD~~~~eflp~~~~~~~~~~~~~~~G~~~dk~~~~~~~~~E~NP~LG~RGiR~~l~~p~i~~~QlrAi~rA 800 (983)
.|+||+|||+|+++| |.++++..++|.||||||||||+++.+|++|++|+|||+||
T Consensus 76 ~~~~v~VR~~d~g~d------------------------k~~~~~~~~~E~nP~LG~RgiR~~l~~p~~~~~ql~Ai~ra 131 (324)
T 2xz9_A 76 GGRPVTIRTLDIGGD------------------------KELPYLDMPKEMNPFLGYRAIRLCLDRPDIFKTQLRAILRA 131 (324)
T ss_dssp TTSCEEEECCCCBGG------------------------GCCTTTCCCCCSCGGGSSBTHHHHHHCHHHHHHHHHHHHHH
T ss_pred CCCceEEEeCCCCcc------------------------hhhhhhccccccCcccccceeeeeccchhhHHHHHHHHHHH
Confidence 999999999999754 55566777899999999999999999999999999999999
Q ss_pred HHHccccCCccCcEEEeecCCCHHHHHHHHHHHHHHHHHHHHHcCCCC--CceEEEEEecHHHHHHHHHHHhhCCEEEEc
Q 039683 801 AVSMSNHRFKVFPEIMVPLVGTPQELGHQISLIRNVATKVFSEMGSSL--DYKVGTMIEIPRAALVADEIAKEAEFFSFG 878 (983)
Q Consensus 801 a~~~~~~g~~~~l~ImiPmV~~~~E~~~~~~~~~~~~~~~~~~~g~~~--~~~vg~MIEtP~a~~~a~~ia~~~Df~sIG 878 (983)
+. .++.+||+|||++++|++++++.++.+..+++ ..|.++ .+++|+|||||+|++++++|++++||||||
T Consensus 132 ~~-------~G~~~ImvPmV~s~~E~~~a~~~v~~~~~~~r-~~G~~~~~~~~vg~mIEtp~av~~~d~Ia~~vD~~siG 203 (324)
T 2xz9_A 132 SA-------YGNVQIMYPMISSVEEVRKANSILEEVKAELD-REGVKYDKEIKVGIMVEIPSAAVTADILAKEVDFFSIG 203 (324)
T ss_dssp GG-------GSCEEEEECSCCCHHHHHHHHHHHHHHHHHHH-HHTCCCCTTCEEEEEECSHHHHHTHHHHTTTCSEEEEC
T ss_pred Hh-------CCCCEEEEcCCCCHHHHHHHHHHHHHHHHHHH-hcCCCCCCCcEEEEEECcHHHHHHHHHHHHhCcEEEEC
Confidence 64 24689999999999999999999888776655 457665 589999999999999999999999999999
Q ss_pred chhhhhhhhcCcCCCccccchhhhccCCCCCCCcccCCHHHHHHHHHHHHHHhhhcCCCCeEEEcCCCCCChHHHHHHHH
Q 039683 879 TNDLTQMTFGYSRDDVGKFLPVYLSKGILQSDPFEVLDQKGVGQLIKIATERGRAARPSLKVGICGEHGGEPSSVAFFAE 958 (983)
Q Consensus 879 tNDLtq~~la~dR~~~~~~~~~y~~~~i~~~~p~~~~d~~aV~~lI~~~~~~a~~~~~g~~v~iCGe~a~~p~~~~~l~~ 958 (983)
||||+||++|+||+|. .+... +||+| |+|+++|++++++|++ +||++|+|||+++||..+++|++
T Consensus 204 tnDLtq~~lg~dR~~~-~~~~~--------~~~~~----p~v~~ai~~vv~aar~--aG~~vgvcge~~~dp~~~~~l~~ 268 (324)
T 2xz9_A 204 TNDLTQYTLAVDRMNE-HVKEY--------YQPFH----PAILRLVKMVIDAAHK--EGKFAAMCGEMAGDPLAAVILLG 268 (324)
T ss_dssp HHHHHHHHTTCCTTCG-GGGGG--------CCTTC----HHHHHHHHHHHHHHHH--TTCEEEECSGGGGCHHHHHHHHH
T ss_pred HHHHHHHHhCCCCCcc-ccccc--------CCCCC----HHHHHHHHHHHHHHHH--HCCceeecCccCCCHHHHHHHHH
Confidence 9999999999999997 33333 58888 7999999999999998 59999999999999999999999
Q ss_pred cCCCEEecCCCchHHHHHHhhhhc
Q 039683 959 AGLDYVSCSPFRVPIARLAAAQVA 982 (983)
Q Consensus 959 lG~~~~Sv~p~~i~~~r~a~a~~~ 982 (983)
+|++++||+|+.++.+|.+.+|..
T Consensus 269 lG~~~~si~p~~i~~~~~~~~~~~ 292 (324)
T 2xz9_A 269 LGLDEFSMSATSIPEIKNIIRNVE 292 (324)
T ss_dssp HTCCEEEECGGGHHHHHHHHTTSC
T ss_pred CCCCEEEEChhHHHHHHHHHHHcC
Confidence 999999999999999999998863
No 9
>1zym_A Enzyme I; phosphotransferase; 2.50A {Escherichia coli} SCOP: a.60.10.1 c.8.1.2 PDB: 1eza_A 1ezb_A 1ezc_A 1ezd_A 2eza_A 2ezb_A 2ezc_A 3ezb_A 3eze_A 3eza_A
Probab=99.91 E-value=2.3e-26 Score=248.24 Aligned_cols=165 Identities=19% Similarity=0.272 Sum_probs=139.8
Q ss_pred HHHHHHHHHhccccCcccccccCcEEEEEeecccccHHHHHHHHHHHHHhhhcchHHHhhccChHhhhhhcCCCCCCCcc
Q 039683 417 ENCEILERHYKDMMDIEFTVQENRLWMLQCRSGKRTGKAAVKIAVDMVNEGLVDTRAAVKMVEPQHLDQLLHPQFEDPSA 496 (983)
Q Consensus 417 ~~a~ilE~~~~~~qDiEf~~~~~~l~ILQ~Rp~~~~a~~Av~~a~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~ 496 (983)
+.+.+|+.|..+++|++|..+.... ++....+++|||+.+++.+.+.|..++|+|+++|..|++|+.+
T Consensus 68 e~a~If~ah~~~L~D~~l~~~v~~~----I~~~~~~Ae~A~~~~~~~~~~~f~~~~d~YlreRa~Di~Dv~~-------- 135 (258)
T 1zym_A 68 EKEAIFEGHIMLLEDEELEQEIIAL----IKDKHMTADAAAHEVIEGQASALEELDDEYLKERAADVRDIGK-------- 135 (258)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHHHH----HHHHCCCHHHHHHHHHHHHHTTTSSSCCHHHHHHHHHHHHHHH--------
T ss_pred hHHHHHHHHHHHhcCHHHHHHHHHH----HHhCCCCHHHHHHHHHHHHHHHHHhCCCHHHHhhhhhHHHHHH--------
Confidence 5667999999999999998764332 3555689999999999999999999999999999999999873
Q ss_pred cchhhhhc--CCCCCCCcEEEEEEcChhHHHHHHhcCCCeEEEecCCCcchHhhhh--hhceEEEccCCccchHHHhhcc
Q 039683 497 YKDKVVAT--GLPASPGAAVGQVVFSAEDAEAWHAQGKSAILVRTETSPEDIGGMH--AAAGILTARGGMTSHAAVVARG 572 (983)
Q Consensus 497 ~~~~vl~~--G~~~s~G~a~G~v~~~~~~~~~~~~~~~~~ILV~~~~~P~~~~~l~--~a~GiVt~~Gg~tSHaAIvAR~ 572 (983)
+++.. |... ++ +...+++.|||+++++|+|+..|+ ++.||||+.||.|||+||+||+
T Consensus 136 ---Rvl~~L~g~~~-~~---------------~~~~~~~~ILVa~~l~Ps~~~~l~~~~~~givt~~Gg~tSH~AIlAR~ 196 (258)
T 1zym_A 136 ---RLLRNILGLKI-ID---------------LSAIQDEVILVAADLTPSETAQLNLKKVLGFITDAGGRTSHTSIMARS 196 (258)
T ss_dssp ---HHHHHHHTCCC-CC---------------GGGCCSCEEEECSCCCHHHHHHSCGGGEEEEECSCCCSSSHHHHHHHH
T ss_pred ---HHHHHhcCCCC-CC---------------ccCCCCCeEEEECCCCHHHHHhhchhhcEEEEEcCCCcccHHHHHHHH
Confidence 33322 3321 10 223568899999999999999986 7999999999999999999999
Q ss_pred cCceEEeccCccccccCCceEEeccEEeeCCCEEEEECCccEEEEcCCCCCC
Q 039683 573 WGKCCVSGCSDIRVNDNEKSIVVGDMVISEGDWLSLNGSTGEVILGKQPLAP 624 (983)
Q Consensus 573 lgIP~VvGv~~~~~~~~~~~~~~~~~~l~~G~~VtlDg~~G~V~~g~~~~~~ 624 (983)
||||||||+++++ ..+++|++|+|||++|.||.||.+...
T Consensus 197 lgIPavvg~~~~~------------~~~~~G~~v~vDg~~G~v~~~p~~~~~ 236 (258)
T 1zym_A 197 LELPAIVGTGSVT------------SQVKNDDYLILDAVNNQVYVNPTNEVI 236 (258)
T ss_dssp HTCCEECCCSCHH------------HHCCTTCEEEECCSSCCEEESCCHHHH
T ss_pred cCCCEEEechhHH------------HhCCCCCEEEEECCCCeEEECcCHHHH
Confidence 9999999999987 568999999999999999999986544
No 10
>2v5j_A 2,4-dihydroxyhept-2-ENE-1,7-dioic acid aldolase; lyase, class II aldolase, homoprotocatechuate, aromatic DEGR aromatic hydrocarbons catabolism; 1.60A {Escherichia coli} PDB: 2v5k_A
Probab=99.89 E-value=1.1e-22 Score=223.24 Aligned_cols=211 Identities=17% Similarity=0.144 Sum_probs=165.1
Q ss_pred hceEEEecCCChHhHHHHHHcCCCccccchhhhhhcccchhhHHHHHHhhcCCHHHHHHHHHhhchhHHHHHHHHHHHcC
Q 039683 642 RRLKVMANADTPDDALTARNNGAQGIGLCRTEHMFFASDERIKAVRKMIMAVTPEQRKAALDLLLPYQRSDFEGIFRAMD 721 (983)
Q Consensus 642 ~~i~v~aNi~~p~d~~~a~~~ga~GIGL~RTE~~f~~~~~~~p~v~~~~~~~~ee~~~~~l~~l~~~q~~~y~~i~~a~~ 721 (983)
..+.+++|+++|+.++.+...|+| |+|++.+ +-| .+.+ |...|.+.++.+
T Consensus 39 ~~~gl~~~~~~p~~~e~a~~~GaD--------~v~lDlE-h~~---------~~~~-----------~~~~~l~a~~~~- 88 (287)
T 2v5j_A 39 PQIGLWLGLSSSYSAELLAGAGFD--------WLLIDGE-HAP---------NNVQ-----------TVLTQLQAIAPY- 88 (287)
T ss_dssp CEEEEEECSCCHHHHHHHHTSCCS--------EEEEESS-SSS---------CCHH-----------HHHHHHHHHTTS-
T ss_pred cEEEEEEECCCHHHHHHHHhCCCC--------EEEEeCC-Ccc---------chHH-----------HHHHHHHHHHhc-
Confidence 368999999999999999999999 6788776 333 3332 566676666555
Q ss_pred CCcEEEEecCCCCCCCCCCCchHHHHHHHHHHcCCChhhhhhhhhccccCCCCCCCccccccCCChHHHHHHHHHHHHHH
Q 039683 722 GLPVTIRLLDPPLHEFLPEGDLEQIVNELTLETGMSEDEVFSRIEKLSEVNPMLGFRGCRLGISYPELTEMQVRAIFQAA 801 (983)
Q Consensus 722 ~~pVtiR~lD~~~~eflp~~~~~~~~~~~~~~~G~~~dk~~~~~~~~~E~NP~LG~RGiR~~l~~p~i~~~QlrAi~rAa 801 (983)
+.+++||+.+. || . |+++++++
T Consensus 89 ~~~~~VRv~~~---------------------------------------d~--------------~----di~~~ld~- 110 (287)
T 2v5j_A 89 PSQPVVRPSWN---------------------------------------DP--------------V----QIKQLLDV- 110 (287)
T ss_dssp SSEEEEECSSS---------------------------------------CH--------------H----HHHHHHHT-
T ss_pred CCCEEEEECCC---------------------------------------CH--------------H----HHHHHHhC-
Confidence 88999998642 11 1 77888866
Q ss_pred HHccccCCccCcEEEeecCCCHHHHHHHHHHHHHHHHHHHHHcCC--------------C------CCceEEEEEecHHH
Q 039683 802 VSMSNHRFKVFPEIMVPLVGTPQELGHQISLIRNVATKVFSEMGS--------------S------LDYKVGTMIEIPRA 861 (983)
Q Consensus 802 ~~~~~~g~~~~l~ImiPmV~~~~E~~~~~~~~~~~~~~~~~~~g~--------------~------~~~~vg~MIEtP~a 861 (983)
| .-.||+|||++++|++++++.+++.-. ..+|. . ..+.+++|||||++
T Consensus 111 ------g---a~~ImlP~V~saeea~~~~~~~~~~p~---G~Rg~g~~~~ra~~~g~~~~y~~~~~~~~~vi~mIEt~~a 178 (287)
T 2v5j_A 111 ------G---TQTLLVPMVQNADEAREAVRATRYPPA---GIRGVGSALARASRWNRIPDYLQKANDQMCVLVQIETREA 178 (287)
T ss_dssp ------T---CCEEEESCCCSHHHHHHHHHHTSCTTT---SCCCGGGTTTGGGTTTTSTTHHHHHHHHCEEEEEECSHHH
T ss_pred ------C---CCEEEeCCCCCHHHHHHHHHHhccCcc---CccccccchhhhhhccchhhhHhhcCCCcEEEEEECcHHH
Confidence 2 248999999999999998876532100 00111 0 03789999999999
Q ss_pred HHHHHHHHhh--CCEEEEcchhhhhhhhcCcCCCccccchhhhccCCCCCCCcccCCHHHHHHHHHHHHHHhhhcCCCCe
Q 039683 862 ALVADEIAKE--AEFFSFGTNDLTQMTFGYSRDDVGKFLPVYLSKGILQSDPFEVLDQKGVGQLIKIATERGRAARPSLK 939 (983)
Q Consensus 862 ~~~a~~ia~~--~Df~sIGtNDLtq~~la~dR~~~~~~~~~y~~~~i~~~~p~~~~d~~aV~~lI~~~~~~a~~~~~g~~ 939 (983)
+.++++|++. +|||+||+|||+|++ |. . ++|.| |+|..++++++.+|++ +||+
T Consensus 179 v~n~deIaa~~~vD~l~iG~~DLs~~l-g~----~--------------~~~~~----p~v~~a~~~iv~aara--aG~~ 233 (287)
T 2v5j_A 179 MKNLPQILDVEGVDGVFIGPADLSADM-GY----A--------------GNPQH----PEVQAAIEQAIVQIRE--SGKA 233 (287)
T ss_dssp HHTHHHHHTSTTEEEEEECHHHHHHHT-TS----T--------------TCCCS----HHHHHHHHHHHHHHHH--TTSE
T ss_pred HHHHHHHhCcCCCCEEEECHHHHHHHh-CC----C--------------CCCCC----HHHHHHHHHHHHHHHH--cCCe
Confidence 9999999984 999999999999987 21 1 35555 6999999999999998 5999
Q ss_pred EEEcCCCCCChHHHHHHHHcCCCEEecCCCchHHHHHHhhh
Q 039683 940 VGICGEHGGEPSSVAFFAEAGLDYVSCSPFRVPIARLAAAQ 980 (983)
Q Consensus 940 v~iCGe~a~~p~~~~~l~~lG~~~~Sv~p~~i~~~r~a~a~ 980 (983)
+++ +++||+.++.++++|+++|||++|...+.+.+.+.
T Consensus 234 ~gv---~~~d~~~a~~~~~~G~~~~s~~~d~~~l~~~~~~~ 271 (287)
T 2v5j_A 234 PGI---LIANEQLAKRYLELGALFVAVGVDTTLLARAAEAL 271 (287)
T ss_dssp EEE---ECCCHHHHHHHHHTTCSEEEEEEHHHHHHHHHHHH
T ss_pred eEE---ecCCHHHHHHHHHhCCCEEEECcHHHHHHHHHHHH
Confidence 998 67899999999999999999999999988776554
No 11
>1dxe_A 2-dehydro-3-deoxy-galactarate aldolase; class II aldolase; 1.8A {Escherichia coli} SCOP: c.1.12.5 PDB: 1dxf_A
Probab=99.89 E-value=1.2e-22 Score=219.84 Aligned_cols=214 Identities=14% Similarity=0.155 Sum_probs=163.8
Q ss_pred hceEEEecCCChHhHHHHHHcCCCccccchhhhhhcccchhhHHHHHHhhcCCHHHHHHHHHhhchhHHHHHHHHHHHcC
Q 039683 642 RRLKVMANADTPDDALTARNNGAQGIGLCRTEHMFFASDERIKAVRKMIMAVTPEQRKAALDLLLPYQRSDFEGIFRAMD 721 (983)
Q Consensus 642 ~~i~v~aNi~~p~d~~~a~~~ga~GIGL~RTE~~f~~~~~~~p~v~~~~~~~~ee~~~~~l~~l~~~q~~~y~~i~~a~~ 721 (983)
..+.+++|+.+|+.++.+...|+| |+|++.+ +-| ++++ |...|...++. .
T Consensus 19 ~~~~~~l~v~~p~~~e~a~~~gaD--------~v~lDlE-d~p---------~~~~-----------~a~~~~~~~~~-~ 68 (256)
T 1dxe_A 19 VQIGCWSALSNPISTEVLGLAGFD--------WLVLDGE-HAP---------NDIS-----------TFIPQLMALKG-S 68 (256)
T ss_dssp CEEEEEECSCSHHHHHHHTTSCCS--------EEEEESS-SSS---------CCHH-----------HHHHHHHHTTT-C
T ss_pred CeEEEEEeCCCHHHHHHHHhCCCC--------EEEEcCC-CCC---------CCHH-----------HHHHHHHHHHh-C
Confidence 457899999999999999999998 7788876 323 4443 55556555544 7
Q ss_pred CCcEEEEecCCCCCCCCCCCchHHHHHHHHHHcCCChhhhhhhhhccccCCCCCCCccccccCCChHHHHHHHHHHHHHH
Q 039683 722 GLPVTIRLLDPPLHEFLPEGDLEQIVNELTLETGMSEDEVFSRIEKLSEVNPMLGFRGCRLGISYPELTEMQVRAIFQAA 801 (983)
Q Consensus 722 ~~pVtiR~lD~~~~eflp~~~~~~~~~~~~~~~G~~~dk~~~~~~~~~E~NP~LG~RGiR~~l~~p~i~~~QlrAi~rAa 801 (983)
+.|++||+.+. | |.. +++++++
T Consensus 69 ~~~~~VRv~~~---------------------------------------~--------------~~~----i~~~l~~- 90 (256)
T 1dxe_A 69 ASAPVVRVPTN---------------------------------------E--------------PVI----IKRLLDI- 90 (256)
T ss_dssp SSEEEEECSSS---------------------------------------C--------------HHH----HHHHHHT-
T ss_pred CCcEEEECCCC---------------------------------------C--------------HHH----HHHHHhc-
Confidence 88999998653 1 111 5666655
Q ss_pred HHccccCCccCcEEEeecCCCHHHHHHHHHHHHHHHHHHH--------HHcC--------CCCCceEEEEEecHHHHHHH
Q 039683 802 VSMSNHRFKVFPEIMVPLVGTPQELGHQISLIRNVATKVF--------SEMG--------SSLDYKVGTMIEIPRAALVA 865 (983)
Q Consensus 802 ~~~~~~g~~~~l~ImiPmV~~~~E~~~~~~~~~~~~~~~~--------~~~g--------~~~~~~vg~MIEtP~a~~~a 865 (983)
| .-+||+|||++++|++++++.+++.-...+ ...| ....+++++|||||+++.++
T Consensus 91 ------g---~~gI~~P~V~s~~ev~~~~~~~~~~p~g~Rg~~~~~~~~~~g~~~~~~~~~~~~~~v~~~IEt~~av~~~ 161 (256)
T 1dxe_A 91 ------G---FYNFLIPFVETKEEAELAVASTRYPPEGIRGVSVSHRANMFGTVADYFAQSNKNITILVQIESQQGVDNV 161 (256)
T ss_dssp ------T---CCEEEESCCCSHHHHHHHHHTTSCTTTCCCCCCSSSGGGGGGTSTTHHHHHTTSCEEEEEECSHHHHHTH
T ss_pred ------C---CceeeecCcCCHHHHHHHHHHhcCCCCCccCCCcchhhhhcCchHHHHHhcCcccEEEEEECCHHHHHhH
Confidence 2 247999999999999998877643100000 0001 01147899999999999999
Q ss_pred HHHHh--hCCEEEEcchhhhhhhhcCcCCCccccchhhhccCCCCCCCcccCCHHHHHHHHHHHHHHhhhcCCCCeEEEc
Q 039683 866 DEIAK--EAEFFSFGTNDLTQMTFGYSRDDVGKFLPVYLSKGILQSDPFEVLDQKGVGQLIKIATERGRAARPSLKVGIC 943 (983)
Q Consensus 866 ~~ia~--~~Df~sIGtNDLtq~~la~dR~~~~~~~~~y~~~~i~~~~p~~~~d~~aV~~lI~~~~~~a~~~~~g~~v~iC 943 (983)
++|++ .+|||+||+|||+|++ |. . ++|.| |+|..++++++.+|++ +||++++
T Consensus 162 ~eIa~~~~vd~l~iG~~DL~~~l-g~----~--------------~~~~~----p~v~~a~~~iv~aa~a--~G~~~~v- 215 (256)
T 1dxe_A 162 DAIAATEGVDGIFVGPSDLAAAL-GH----L--------------GNASH----PDVQKAIQHIFNRASA--HGKPSGI- 215 (256)
T ss_dssp HHHHTSTTCCEEEECHHHHHHHT-TC----T--------------TCTTS----HHHHHHHHHHHHHHHH--TTCCEEE-
T ss_pred HHHhCCCCCCEEEEChHHHHHHh-CC----C--------------CCCCC----HHHHHHHHHHHHHHHH--hCCceEE-
Confidence 99998 4999999999999997 21 1 35555 6999999999999998 5999998
Q ss_pred CCCCCChHHHHHHHHcCCCEEecCCCchHHHHHHhhh
Q 039683 944 GEHGGEPSSVAFFAEAGLDYVSCSPFRVPIARLAAAQ 980 (983)
Q Consensus 944 Ge~a~~p~~~~~l~~lG~~~~Sv~p~~i~~~r~a~a~ 980 (983)
+++||+.++.++++|+++|||++|...+.+.+.+.
T Consensus 216 --~~~d~~~~~~~~~~G~~~~s~~~d~~~l~~~~~~~ 250 (256)
T 1dxe_A 216 --LAPVEADARRYLEWGATFVAVGSDLGVFRSATQKL 250 (256)
T ss_dssp --ECCSHHHHHHHHHTTCCEEEEEEHHHHHHHHHHHH
T ss_pred --ecCCHHHHHHHHHcCCCEEEechHHHHHHHHHHHH
Confidence 67899999999999999999999999988876654
No 12
>2vws_A YFAU, 2-keto-3-deoxy sugar aldolase; lyase, escherichia coli K-12 protein YFAU, 2-keto-3-deoxy SU aldolase, degradation of homoprotocatechuate; 1.39A {Escherichia coli} PDB: 2vwt_A
Probab=99.88 E-value=6.6e-22 Score=215.26 Aligned_cols=213 Identities=15% Similarity=0.153 Sum_probs=163.4
Q ss_pred ceEEEecCCChHhHHHHHHcCCCccccchhhhhhcccchhhHHHHHHhhcCCHHHHHHHHHhhchhHHHHHHHHHHHcCC
Q 039683 643 RLKVMANADTPDDALTARNNGAQGIGLCRTEHMFFASDERIKAVRKMIMAVTPEQRKAALDLLLPYQRSDFEGIFRAMDG 722 (983)
Q Consensus 643 ~i~v~aNi~~p~d~~~a~~~ga~GIGL~RTE~~f~~~~~~~p~v~~~~~~~~ee~~~~~l~~l~~~q~~~y~~i~~a~~~ 722 (983)
.+.+++|+.+|+.++.+...|+| |+|++.+ +-| .+++ |...|...++.. +
T Consensus 19 ~~g~~~~~~~p~~~e~a~~~GaD--------~v~lDlE-~~~---------~~~~-----------~~~~~~~a~~~~-~ 68 (267)
T 2vws_A 19 QIGLWLSSTTAYMAEIAATSGYD--------WLLIDGE-HAP---------NTIQ-----------DLYHQLQAVAPY-A 68 (267)
T ss_dssp EEEEEECSCCHHHHHHHHTTCCS--------EEEEETT-TSC---------CCHH-----------HHHHHHHHHTTS-S
T ss_pred EEEEEEeCCCHHHHHHHHhCCCC--------EEEEcCC-CCC---------CCHH-----------HHHHHHHHHHhC-C
Confidence 58999999999999999999999 6788776 333 3332 556666666554 7
Q ss_pred CcEEEEecCCCCCCCCCCCchHHHHHHHHHHcCCChhhhhhhhhccccCCCCCCCccccccCCChHHHHHHHHHHHHHHH
Q 039683 723 LPVTIRLLDPPLHEFLPEGDLEQIVNELTLETGMSEDEVFSRIEKLSEVNPMLGFRGCRLGISYPELTEMQVRAIFQAAV 802 (983)
Q Consensus 723 ~pVtiR~lD~~~~eflp~~~~~~~~~~~~~~~G~~~dk~~~~~~~~~E~NP~LG~RGiR~~l~~p~i~~~QlrAi~rAa~ 802 (983)
.+++||+... | | .|+++++++
T Consensus 69 ~~~~VRv~~~---------------------------------------~--------------~----~~i~~~l~~-- 89 (267)
T 2vws_A 69 SQPVIRPVEG---------------------------------------S--------------K----PLIKQVLDI-- 89 (267)
T ss_dssp SEEEEECSSC---------------------------------------C--------------H----HHHHHHHHT--
T ss_pred CcEEEEeCCC---------------------------------------C--------------H----HHHHHHHHh--
Confidence 8999998521 1 1 456777765
Q ss_pred HccccCCccCcEEEeecCCCHHHHHHHHHHHHHHHHH-------H-H-HHcCC--C------CCceEEEEEecHHHHHHH
Q 039683 803 SMSNHRFKVFPEIMVPLVGTPQELGHQISLIRNVATK-------V-F-SEMGS--S------LDYKVGTMIEIPRAALVA 865 (983)
Q Consensus 803 ~~~~~g~~~~l~ImiPmV~~~~E~~~~~~~~~~~~~~-------~-~-~~~g~--~------~~~~vg~MIEtP~a~~~a 865 (983)
| .-+||+|||++++|++++++.+++.-.. + + ...|. . ..+++++|||||+++.++
T Consensus 90 -----g---~~~I~~P~V~s~ee~~~~~~~~~~~p~G~Rg~~~~~~~~~~~g~~~~y~~~~~~~~~v~~~IEt~~av~~~ 161 (267)
T 2vws_A 90 -----G---AQTLLIPMVDTAEQARQVVSATRYPPYGERGVGASVARAARWGRIENYMAQVNDSLCLLVQVESKTALDNL 161 (267)
T ss_dssp -----T---CCEEEECCCCSHHHHHHHHHHTSCTTTSCCCSCGGGSGGGGGGTSTTHHHHHHHHCEEEEECCSHHHHHTH
T ss_pred -----C---CCEEEeCCCCCHHHHHHHHHHHcCCCCCccccccchhhhhhcCcchhhhhhcccccEEEEEECCHHHHHHH
Confidence 2 2489999999999999988766421000 0 0 00010 0 037899999999999999
Q ss_pred HHHHhh--CCEEEEcchhhhhhhhcCcCCCccccchhhhccCCCCCCCcccCCHHHHHHHHHHHHHHhhhcCCCCeEEEc
Q 039683 866 DEIAKE--AEFFSFGTNDLTQMTFGYSRDDVGKFLPVYLSKGILQSDPFEVLDQKGVGQLIKIATERGRAARPSLKVGIC 943 (983)
Q Consensus 866 ~~ia~~--~Df~sIGtNDLtq~~la~dR~~~~~~~~~y~~~~i~~~~p~~~~d~~aV~~lI~~~~~~a~~~~~g~~v~iC 943 (983)
++|++. +|||+||+|||+|++ |. . ++|.| |+|..++++++.+|++ +||++++
T Consensus 162 ~eIa~~~gvd~l~iG~~DL~~~l-g~----~--------------~~~~~----p~v~~a~~~iv~aa~a--aG~~~~v- 215 (267)
T 2vws_A 162 DEILDVEGIDGVFIGPADLSASL-GY----P--------------DNAGH----PEVQRIIETSIRRIRA--AGKAAGF- 215 (267)
T ss_dssp HHHHTSTTCCEEEECHHHHHHHT-TC----S--------------SSCCT----HHHHHHHHHHHHHHHH--TTCEEEE-
T ss_pred HHHhCCCCCCEEEEChHHHHHHh-CC----C--------------CCCCC----HHHHHHHHHHHHHHHH--hCCeEEE-
Confidence 999998 999999999999986 21 1 35555 6999999999999998 5999999
Q ss_pred CCCCCChHHHHHHHHcCCCEEecCCCchHHHHHHhhh
Q 039683 944 GEHGGEPSSVAFFAEAGLDYVSCSPFRVPIARLAAAQ 980 (983)
Q Consensus 944 Ge~a~~p~~~~~l~~lG~~~~Sv~p~~i~~~r~a~a~ 980 (983)
+++||+.++.++++|+++||+++|...+.+.+.+.
T Consensus 216 --~~~d~~~a~~~~~~G~~~~s~~~d~~~l~~~~~~~ 250 (267)
T 2vws_A 216 --LAVAPDMAQQCLAWGANFVAVGVDTMLYSDALDQR 250 (267)
T ss_dssp --ECSSHHHHHHHHHTTCCEEEEEEHHHHHHHHHHHH
T ss_pred --ecCCHHHHHHHHHCCCCEEEEchHHHHHHHHHHHH
Confidence 57799999999999999999999999988776554
No 13
>1izc_A Macrophomate synthase intermolecular diels-aldera; TIM-barrel, pyruvate Mg(II) complex, lyase; 1.70A {Macrophoma commelinae} SCOP: c.1.12.5
Probab=99.81 E-value=2.7e-19 Score=200.17 Aligned_cols=208 Identities=10% Similarity=0.005 Sum_probs=153.0
Q ss_pred hceEEEecCCChHhHHHHHHcCCCccccchhhhhhcccchhhHHHHHHhhcCCHHHHHHHHHhhchhHHHHHHH--HHHH
Q 039683 642 RRLKVMANADTPDDALTARNNGAQGIGLCRTEHMFFASDERIKAVRKMIMAVTPEQRKAALDLLLPYQRSDFEG--IFRA 719 (983)
Q Consensus 642 ~~i~v~aNi~~p~d~~~a~~~ga~GIGL~RTE~~f~~~~~~~p~v~~~~~~~~ee~~~~~l~~l~~~q~~~y~~--i~~a 719 (983)
..+.+++|+.+|+.++.+...|+| |+|++.+ +-| .+.+ | .|.. .+..
T Consensus 42 ~~ig~~l~i~~p~~~e~a~~~GaD--------~vilDlE-ha~---------~~~e-----------~--~~~~l~a~~~ 90 (339)
T 1izc_A 42 TLMGVAHGIPSTFVTKVLAATKPD--------FVWIDVE-HGM---------FNRL-----------E--LHDAIHAAQH 90 (339)
T ss_dssp CEEEEEECSCCHHHHHHHHHTCCS--------EEEEETT-TSC---------CCHH-----------H--HHHHHHHHHH
T ss_pred eEEEEEEECCCHHHHHHHHhCCCC--------EEEEECC-CCC---------CcHH-----------H--HHHHHHHhhh
Confidence 458999999999999999999999 6677776 333 2221 1 1221 1121
Q ss_pred c--CCCcEEEEecCCCCCCCCCCCchHHHHHHHHHHcCCChhhhhhhhhccccCCCCCCCccccccCCChHHHHHHHHHH
Q 039683 720 M--DGLPVTIRLLDPPLHEFLPEGDLEQIVNELTLETGMSEDEVFSRIEKLSEVNPMLGFRGCRLGISYPELTEMQVRAI 797 (983)
Q Consensus 720 ~--~~~pVtiR~lD~~~~eflp~~~~~~~~~~~~~~~G~~~dk~~~~~~~~~E~NP~LG~RGiR~~l~~p~i~~~QlrAi 797 (983)
. .+.+++||+.|. || .||+++
T Consensus 91 ~~~~~~~~~VRv~~~---------------------------------------~~------------------~di~~~ 113 (339)
T 1izc_A 91 HSEGRSLVIVRVPKH---------------------------------------DE------------------VSLSTA 113 (339)
T ss_dssp HTTTCSEEEEECCTT---------------------------------------CH------------------HHHHHH
T ss_pred cCCCCCeEEEEeCCC---------------------------------------CH------------------HHHHHH
Confidence 1 127899999875 11 478999
Q ss_pred HHHHHHccccCCccCcEEEeecCCCHHHHHHHHHHHHHHHHHHHHHcCC-------------------CC------CceE
Q 039683 798 FQAAVSMSNHRFKVFPEIMVPLVGTPQELGHQISLIRNVATKVFSEMGS-------------------SL------DYKV 852 (983)
Q Consensus 798 ~rAa~~~~~~g~~~~l~ImiPmV~~~~E~~~~~~~~~~~~~~~~~~~g~-------------------~~------~~~v 852 (983)
+++. .-+||+|||++++|++++++.+++.- ...+|. .| .+++
T Consensus 114 LdaG----------a~gImlP~V~saee~~~~~~~~~~~p---~g~Rg~~~~a~~~G~~~~~~~~~~~~y~~~a~~~i~v 180 (339)
T 1izc_A 114 LDAG----------AAGIVIPHVETVEEVREFVKEMYYGP---IGRRSFSPWTFSPGIADASLFPNDPYNVATSNNHVCI 180 (339)
T ss_dssp HHHT----------CSEEEETTCCCHHHHHHHHHHHSCTT---TCCCCCCSTTCBTTTBCCCSSTTCTTCHHHHHHHCEE
T ss_pred HhCC----------CCEEEeCCCCCHHHHHHHHHHhccCc---cCcccccchhhcccccccccccchhhhhhhcCcCceE
Confidence 9872 23799999999999999988764320 001121 11 3789
Q ss_pred EEEEecHHHHHHHHHHHhh--CCEEEEcchhhhhhhhcCcCCCccccchhhhccCCCCCCCcccCCHHHHHHHHHHHHHH
Q 039683 853 GTMIEIPRAALVADEIAKE--AEFFSFGTNDLTQMTFGYSRDDVGKFLPVYLSKGILQSDPFEVLDQKGVGQLIKIATER 930 (983)
Q Consensus 853 g~MIEtP~a~~~a~~ia~~--~Df~sIGtNDLtq~~la~dR~~~~~~~~~y~~~~i~~~~p~~~~d~~aV~~lI~~~~~~ 930 (983)
++|||||+++.++++|++. +|||+||+|||+|++......+. | .++ | |+|..++++++.+
T Consensus 181 i~mIEt~~av~nldeIaa~~~vD~l~iG~~DLs~~~~~~~~~~l----------G---~~~-~----p~v~~a~~~iv~a 242 (339)
T 1izc_A 181 IPQIESVKGVENVDAIAAMPEIHGLMFGPGDYMIDAGLDLNGAL----------S---GVP-H----PTFVEAMTKFSTA 242 (339)
T ss_dssp EEEECSHHHHHTHHHHHTCTTCCCEEECHHHHHHHTTCCTTCCT----------T---SCC-C----HHHHHHHHHHHHH
T ss_pred EEEEChHHHHHHHHHHhcCCCCCEEEECHHHHHhhhhcccchhh----------C---CCC-C----HHHHHHHHHHHHH
Confidence 9999999999999999984 99999999999999722211111 1 122 4 6899999999999
Q ss_pred hhhcCCCCeEEEcCCCCCChHHHHHHHHcCCCEEecCCCchHH
Q 039683 931 GRAARPSLKVGICGEHGGEPSSVAFFAEAGLDYVSCSPFRVPI 973 (983)
Q Consensus 931 a~~~~~g~~v~iCGe~a~~p~~~~~l~~lG~~~~Sv~p~~i~~ 973 (983)
|++ +||+++. ++.+|..+..++++|++.++++++...+
T Consensus 243 ara--aGk~~g~---~~~d~~~a~~~~~~Gf~~l~~~~di~~l 280 (339)
T 1izc_A 243 AQR--NGVPIFG---GALSVDMVPSLIEQGYRAIAVQFDVWGL 280 (339)
T ss_dssp HHH--TTCCEEE---ECSSGGGHHHHHHTTEEEEEEEEHHHHH
T ss_pred HHH--hCCceeE---ecCCHHHHHHHHHhCCCEEEecHHHHHH
Confidence 998 5999854 8899999999999999999999965554
No 14
>3qz6_A HPCH/HPAI aldolase; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomics, MCSG; 2.00A {Desulfitobacterium hafniense} SCOP: c.1.12.0
Probab=99.78 E-value=5.3e-18 Score=183.77 Aligned_cols=140 Identities=14% Similarity=0.142 Sum_probs=112.0
Q ss_pred cEEEeecCCCHHHHHHHHHHHHHHHHH------HH-HHcCC----------CCCceEEEEEecHHHHHHHHHHHh--hCC
Q 039683 813 PEIMVPLVGTPQELGHQISLIRNVATK------VF-SEMGS----------SLDYKVGTMIEIPRAALVADEIAK--EAE 873 (983)
Q Consensus 813 l~ImiPmV~~~~E~~~~~~~~~~~~~~------~~-~~~g~----------~~~~~vg~MIEtP~a~~~a~~ia~--~~D 873 (983)
-.||+|||++++|++++++.+++.-.. .+ ..+|. ...+++++|||||+++.++++|++ .+|
T Consensus 90 ~gI~lP~v~saed~~~~~~~~~~~p~G~Rg~~~~r~~~~g~~~~~~y~~~~~~~~~v~~mIEt~~av~~~~eIaa~~~vd 169 (261)
T 3qz6_A 90 EGFMIPGVQSAETMRETVRLAKYPPLGERGVGGSIVTDFKPVNWAEWVQERNDEIFIMAQIEHVKAVEDIDSILAVQGVD 169 (261)
T ss_dssp CEEEETTCCSHHHHHHHHHHHSCTTTCCCCCCCGGGGTTCCCCHHHHHHHHHTTCEEEEEECCHHHHHTHHHHHTSTTCC
T ss_pred CEEEECCcCCHHHHHHHHHHhccCCCCCcCcccchhhhccccchhhHHhcCCCCeEEEEEECCHHHHHHHHHHhCCCCCC
Confidence 589999999999999999887431000 00 00110 014799999999999999999995 499
Q ss_pred EEEEcchhhhhhhhcCcCCCccccchhhhccCCCCCCCcccCCHHHHHHHHHHHHHHhhhcCCCCeEEEcCCCCCChHHH
Q 039683 874 FFSFGTNDLTQMTFGYSRDDVGKFLPVYLSKGILQSDPFEVLDQKGVGQLIKIATERGRAARPSLKVGICGEHGGEPSSV 953 (983)
Q Consensus 874 f~sIGtNDLtq~~la~dR~~~~~~~~~y~~~~i~~~~p~~~~d~~aV~~lI~~~~~~a~~~~~g~~v~iCGe~a~~p~~~ 953 (983)
||+||+|||+|++ |+. ++|.| |+|..++++++.+|++ +||++|+|+ ++|+.+
T Consensus 170 ~l~iG~~DL~~~l-g~~------------------~~~~~----p~v~~a~~~iv~aa~a--aG~~~g~~~---~~~~~~ 221 (261)
T 3qz6_A 170 AVIFGPRDLSNDL-GII------------------GQTEH----PKVYECYEKVYRAADR--QGVVKGFFT---AADAAK 221 (261)
T ss_dssp EEEECHHHHHHHT-TCT------------------TCTTC----HHHHHHHHHHHHHHHH--HTCEEEEEE---SSCGGG
T ss_pred EEEECHHHHHHHh-CCC------------------CCCCC----HHHHHHHHHHHHHHHH--hCCCEEEEe---CCHHHH
Confidence 9999999999976 332 24555 6999999999999998 599999984 699999
Q ss_pred -HHHHHcCCCEEecCCCchHHHHHHhhh
Q 039683 954 -AFFAEAGLDYVSCSPFRVPIARLAAAQ 980 (983)
Q Consensus 954 -~~l~~lG~~~~Sv~p~~i~~~r~a~a~ 980 (983)
++|+++|+++|||++|...+.+.+.++
T Consensus 222 ~~~~~~~G~~~~s~~~D~~~l~~~~~~~ 249 (261)
T 3qz6_A 222 MGWAVERGAQMLLWSGDVAALQTYTAKG 249 (261)
T ss_dssp GHHHHHTTCCEEEEEEHHHHHHHHHHHH
T ss_pred HHHHHHCCCCEEEEhhHHHHHHHHHHHH
Confidence 999999999999999999887776554
No 15
>1sgj_A Citrate lyase, beta subunit; trimer, TIM barrel, structural genomics, PSI, protein structure initiative; 1.84A {Deinococcus radiodurans} SCOP: c.1.12.5
Probab=99.78 E-value=1.9e-19 Score=197.62 Aligned_cols=215 Identities=14% Similarity=0.085 Sum_probs=161.5
Q ss_pred hceEEEecCCChHhHHHHHHcCCCccccchhhhhhcccchhhHHHHHHhhcCCHHHHHHHHHhhchhHHHHHHHHHHHcC
Q 039683 642 RRLKVMANADTPDDALTARNNGAQGIGLCRTEHMFFASDERIKAVRKMIMAVTPEQRKAALDLLLPYQRSDFEGIFRAMD 721 (983)
Q Consensus 642 ~~i~v~aNi~~p~d~~~a~~~ga~GIGL~RTE~~f~~~~~~~p~v~~~~~~~~ee~~~~~l~~l~~~q~~~y~~i~~a~~ 721 (983)
++..+++|.++|+.++++...|+|+| +++.+ +-+ .++.++ |.++|..+...+.
T Consensus 8 ~rs~L~~p~~~~~~~~~a~~~gaD~v--------ilDlE-dav-------~~~~~~-----------k~~Ar~~v~~~l~ 60 (284)
T 1sgj_A 8 LRSVLFAPGNRADLIAKLPRSAPDAV--------VIDLE-DAV-------PGTAEA-----------KAAARPVAHDAAR 60 (284)
T ss_dssp CSEEEEEETTCHHHHHHTTTTCCSEE--------EEESS-TTS-------CSSHHH-----------HHHHHHHHHHHHH
T ss_pred CceEEEccCCCHHHHHHHHhCCCCEE--------EEECC-CCC-------CCchhh-----------HHHHHHHHHHHHH
Confidence 56789999999999999999999985 56655 222 111143 3444555443321
Q ss_pred CCcEEEEecC--CCCCCCCCCCchHHHHHHHHHHcCCChhhhhhhhhccccCCCCCCCccccccCCChHHHHHHHHHHHH
Q 039683 722 GLPVTIRLLD--PPLHEFLPEGDLEQIVNELTLETGMSEDEVFSRIEKLSEVNPMLGFRGCRLGISYPELTEMQVRAIFQ 799 (983)
Q Consensus 722 ~~pVtiR~lD--~~~~eflp~~~~~~~~~~~~~~~G~~~dk~~~~~~~~~E~NP~LG~RGiR~~l~~p~i~~~QlrAi~r 799 (983)
. +| . | + +.+++|+...+++.+..|++++++
T Consensus 61 ~-------~~~~~----------------------~----------------~---~~~~VRv~~~~~~~~~~dl~~~l~ 92 (284)
T 1sgj_A 61 D-------LIAAA----------------------P----------------H---LAVFVRVNALHSPYFEDDLSVLTP 92 (284)
T ss_dssp H-------HHHHS----------------------T----------------T---SEEEEECCCTTSTTHHHHGGGCCT
T ss_pred h-------ccccc----------------------C----------------C---CeEEEEeCCCCCHhHHHHHHHHhc
Confidence 1 01 0 0 0 345666654454557778887764
Q ss_pred HHHHccccCCccCcEEEeecCCCHHHHHHHHHHHHHHHHHHHHHcCCCCCceEEEEEecHHHHHHHHHHHh--hCCEEEE
Q 039683 800 AAVSMSNHRFKVFPEIMVPLVGTPQELGHQISLIRNVATKVFSEMGSSLDYKVGTMIEIPRAALVADEIAK--EAEFFSF 877 (983)
Q Consensus 800 Aa~~~~~~g~~~~l~ImiPmV~~~~E~~~~~~~~~~~~~~~~~~~g~~~~~~vg~MIEtP~a~~~a~~ia~--~~Df~sI 877 (983)
| ...||+|||++++|++++.+.+++. | ..+++++|||||+++.++++|+. .+|+++|
T Consensus 93 --------g---~~~i~lPkv~s~~~v~~~~~~l~~~--------g--~~~~i~~~IEt~~av~~~~eIa~~~~vd~l~i 151 (284)
T 1sgj_A 93 --------E---LSGVVVPKLEMGAEARQVAQMLQER--------S--LPLPILAGLETGAGVWNAREIMEVPEVAWAYF 151 (284)
T ss_dssp --------T---SSEEEECSCCSHHHHHHHHHHHHHT--------T--CCCCEEEEECSHHHHHTHHHHHTSTTEEEEEE
T ss_pred --------c---CCEEEeCCCCCHHHHHHHHHHHHhc--------C--CCeEEEEEecCHHHHHHHHHHHcCCCCcEEEE
Confidence 1 2489999999999999998876543 2 24789999999999999999997 4999999
Q ss_pred cchhhhhhhhcCcCCCccccchhhhccCCCCCCCcccCCHHHHHHHHHHHHHHhhhcCCCCeE--EEcCCCCCCh---HH
Q 039683 878 GTNDLTQMTFGYSRDDVGKFLPVYLSKGILQSDPFEVLDQKGVGQLIKIATERGRAARPSLKV--GICGEHGGEP---SS 952 (983)
Q Consensus 878 GtNDLtq~~la~dR~~~~~~~~~y~~~~i~~~~p~~~~d~~aV~~lI~~~~~~a~~~~~g~~v--~iCGe~a~~p---~~ 952 (983)
|+|||++++ |++|+ |.+ +.+..++++++.+|++ +||++ ++||++..++ ..
T Consensus 152 G~~DL~~~l-g~~~~------------------~~~----~~~~~a~~~iv~aa~a--~G~~~i~~v~~~~~d~~~l~~~ 206 (284)
T 1sgj_A 152 GAEDYTTDL-GGKRT------------------PGG----LEVLYARSQVALAARL--TGVAALDIVVTALNDPETFRAD 206 (284)
T ss_dssp CHHHHHHHH-TCCCC------------------SSC----GGGHHHHHHHHHHHHH--HTCEEEECCCCCCSCHHHHHHH
T ss_pred CHHHHHHHh-CCCCC------------------CCh----HHHHHHHHHHHHHHHH--cCCCeeeCCcCCCCCHHHHHHH
Confidence 999999998 66652 223 3688999999999988 49999 7899997666 78
Q ss_pred HHHHHHcCCC-EEecCCCchHHHHHH
Q 039683 953 VAFFAEAGLD-YVSCSPFRVPIARLA 977 (983)
Q Consensus 953 ~~~l~~lG~~-~~Sv~p~~i~~~r~a 977 (983)
+..+.++||+ .+++.|..++.++.+
T Consensus 207 ~~~~~~~Gf~Gk~~ihP~qi~~i~~~ 232 (284)
T 1sgj_A 207 AEQGRALGYSGKLCIHPAQVALAHEY 232 (284)
T ss_dssp HHHHHHTTCSEEEESSHHHHHHHHTT
T ss_pred HHHHHhCCCCcccccCHHHHHHHHHH
Confidence 8899999999 999999999998764
No 16
>2e28_A Pyruvate kinase, PK; allosteric, transferase; 2.40A {Geobacillus stearothermophilus}
Probab=99.75 E-value=4.6e-19 Score=210.07 Aligned_cols=148 Identities=23% Similarity=0.335 Sum_probs=117.7
Q ss_pred ccccCcccccccCcEEEEEeecccccHHHHHHHHHHHHHhhhcchHHHhhccChHhhhhhcCCCCCCCcccchhhhhcCC
Q 039683 427 KDMMDIEFTVQENRLWMLQCRSGKRTGKAAVKIAVDMVNEGLVDTRAAVKMVEPQHLDQLLHPQFEDPSAYKDKVVATGL 506 (983)
Q Consensus 427 ~~~qDiEf~~~~~~l~ILQ~Rp~~~~a~~Av~~a~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~vl~~G~ 506 (983)
....|.+|+..++.++++|.+|...... ....++. .+ ..++.+|.
T Consensus 438 ~~~~~~G~~k~GD~VVItqG~P~g~~G~------------------TN~LkI~-----~V------------ge~l~~G~ 482 (587)
T 2e28_A 438 DAAVRSGLVKHGDLVVITAGVPVGETGS------------------TNLMKVH-----VI------------SDLLAKGQ 482 (587)
T ss_dssp HHHHHHTCCCTTCEEEEEECSSCSSCCC------------------CCEEEEE-----EC------------SCEEEECE
T ss_pred HHHHhCCcccccceEEEecCcccCcCCC------------------CceEEEE-----EE------------eccccccc
Confidence 3456778888888999999988542110 0000000 00 14577999
Q ss_pred CCCCCcEEEEEEcChhHHHHHHhcCCCeEEEecCCCcchHhhhhhhceEEEccCCccchHHHhhcccCceEEeccCcccc
Q 039683 507 PASPGAAVGQVVFSAEDAEAWHAQGKSAILVRTETSPEDIGGMHAAAGILTARGGMTSHAAVVARGWGKCCVSGCSDIRV 586 (983)
Q Consensus 507 ~~s~G~a~G~v~~~~~~~~~~~~~~~~~ILV~~~~~P~~~~~l~~a~GiVt~~Gg~tSHaAIvAR~lgIP~VvGv~~~~~ 586 (983)
++++|.++|++++..+..+.+..++++.|||+++++|+|++.|+++.||||+.||.|||+||+||++|||||+|+++++
T Consensus 483 ~~~~g~~~G~v~v~~~~~~~~~~~~~g~ILVa~~l~Ps~~~~l~~~~Givt~~Gg~tSHaAIlAR~lgIPaVvG~~~~~- 561 (587)
T 2e28_A 483 GIGRKSAFGKAVVAKTAEEARQKMVDGGILVTVSTDADMMPAIEKAAAIITEEGGLTSHAAVVGLSLGIPVIVGVENAT- 561 (587)
T ss_dssp EESSCEECCBEEECSSHHHHHHHCCTTCEEEESCCCGGGHHHHTTCSEEEESSCCTTSHHHHHHHHHTCCEEECCTTHH-
T ss_pred cccCCeEEeeEEEeCCHHHHhhcCCCCeEEEECCCCHHHHHHHHhcEEEEEcCCCCcCHHHHHHHHcCCCEEEecccHH-
Confidence 9999999999886543322245677899999999999999999999999999999999999999999999999999987
Q ss_pred ccCCceEEeccEEeeCCCEEEEECCccEEEEcCCC
Q 039683 587 NDNEKSIVVGDMVISEGDWLSLNGSTGEVILGKQP 621 (983)
Q Consensus 587 ~~~~~~~~~~~~~l~~G~~VtlDg~~G~V~~g~~~ 621 (983)
..+++|+.|+|||.+|.||.|..+
T Consensus 562 -----------~~l~~G~~v~vDg~~G~V~~~~~~ 585 (587)
T 2e28_A 562 -----------TLFKDGQEITVDGGFGAVYRGHAS 585 (587)
T ss_dssp -----------HHSCTTCBEEEETTTTEEEESCCS
T ss_pred -----------HhCCCCCEEEEECCCCEEEEcccc
Confidence 668999999999999999999653
No 17
>3t05_A Pyruvate kinase, PK; tetramer, glycolysis, transferase; 3.05A {Staphylococcus aureus subsp} PDB: 3t07_A* 3t0t_A*
Probab=99.71 E-value=2.9e-18 Score=202.65 Aligned_cols=110 Identities=19% Similarity=0.256 Sum_probs=97.3
Q ss_pred hhhhcCCCCCCCcEEEEEEcChhHHHHHHhcCCCeEEEecCCCcchHhhhhhhceEEEccCCccchHHHhhcccCceEEe
Q 039683 500 KVVATGLPASPGAAVGQVVFSAEDAEAWHAQGKSAILVRTETSPEDIGGMHAAAGILTARGGMTSHAAVVARGWGKCCVS 579 (983)
Q Consensus 500 ~vl~~G~~~s~G~a~G~v~~~~~~~~~~~~~~~~~ILV~~~~~P~~~~~l~~a~GiVt~~Gg~tSHaAIvAR~lgIP~Vv 579 (983)
.++.+|+++++|.++|++++..+..+.+..++++.|||+++++|+|+..|++++||||+.||.|||+||+||++|||||+
T Consensus 495 ~vL~~G~~i~~G~v~G~v~vv~~~~da~~~~~~g~ILVa~~l~Ps~~~~l~~v~GiVte~Gg~tSHaAIlAR~lgIPaVv 574 (606)
T 3t05_A 495 DEIANGQGIGRGSVVGTTLVAETVKDLEGKDLSDKVIVTNSIDETFVPYVEKALGLITEENGITSPSAIVGLEKGIPTVV 574 (606)
T ss_dssp CCSEECEEESSCEEEEEEEECSSGGGGSSSCCSSEEEEESCCCTTTHHHHTTSSEEEESSCCSSSHHHHHHHHTTCCEEE
T ss_pred cccccCcccccceEEEEEEEECChHHHhhcCCCCeEEEECCCCHHHHHHHHhhEEEEecCCCcccHHHHHHhhCCCCEEE
Confidence 35789999999999999986543222244568899999999999999999999999999999999999999999999999
Q ss_pred ccCccccccCCceEEeccEEeeCCCEEEEECCccEEEEcCCC
Q 039683 580 GCSDIRVNDNEKSIVVGDMVISEGDWLSLNGSTGEVILGKQP 621 (983)
Q Consensus 580 Gv~~~~~~~~~~~~~~~~~~l~~G~~VtlDg~~G~V~~g~~~ 621 (983)
|+++++ ..+++|++|+|||.+|.||.|...
T Consensus 575 G~~~a~------------~~l~~G~~V~vDg~~G~V~~G~~~ 604 (606)
T 3t05_A 575 GVEKAV------------KNISNNVLVTIDAAQGKIFEGYAN 604 (606)
T ss_dssp CCTTHH------------HHSCSSCEEEEETTTTEEESSCCC
T ss_pred ecccHH------------hhCCCCCEEEEECCCCEEEeCeec
Confidence 999987 678999999999999999998653
No 18
>3r4i_A Citrate lyase; TIM beta/alpha-barrel, structural genomics, joint center for structural genomics, JCSG, protein structure initiative; 2.24A {Burkholderia xenovorans}
Probab=99.60 E-value=5.8e-15 Score=165.49 Aligned_cols=172 Identities=18% Similarity=0.105 Sum_probs=134.1
Q ss_pred ccccccCCChHHHHHHHHHHHHHHHHccccCCccCcEEEeecCCCHHHHHHHHHHHHHHHHHHHHHcCCCCCceEEEEEe
Q 039683 778 RGCRLGISYPELTEMQVRAIFQAAVSMSNHRFKVFPEIMVPLVGTPQELGHQISLIRNVATKVFSEMGSSLDYKVGTMIE 857 (983)
Q Consensus 778 RGiR~~l~~p~i~~~QlrAi~rAa~~~~~~g~~~~l~ImiPmV~~~~E~~~~~~~~~~~~~~~~~~~g~~~~~~vg~MIE 857 (983)
.++|.---....+..||+++++++. .+...||+|||++++|++.+.+.+.+.. .+.|.+..+++++|||
T Consensus 84 ~~VRIN~~dt~~~~~DL~al~~~~~-------~g~~~I~LPKves~~dv~~~~~~l~~~e----~~~G~~~~~~l~~~IE 152 (339)
T 3r4i_A 84 VGVRIHDFDHAHWRDDVRLILRAAK-------RAPAYITLPKIRHVHDAAEMVAFIEATR----RELGIAQPVPVQLLVE 152 (339)
T ss_dssp EEEECCCTTSTTHHHHHHHHHHHCS-------SCCSCEEECC-CCHHHHHHHHHHHHHHH----HHTTCSSCCCEEEEEC
T ss_pred EEEEECCCCccHHHHHHHHhhhhcc-------CCCCEEEeCCCCCHHHHHHHHHHHHHHH----HHcCCCCCcEEEEEec
Confidence 4677763345589999999998831 1346899999999999999998887643 2456554689999999
Q ss_pred cHHHHHHHHHHHh--hCCEEEEcchhhhhhhh-cCcCCCccccchhhhccCCCCCCCcccCCHHHHHHHHHHHHHHhhhc
Q 039683 858 IPRAALVADEIAK--EAEFFSFGTNDLTQMTF-GYSRDDVGKFLPVYLSKGILQSDPFEVLDQKGVGQLIKIATERGRAA 934 (983)
Q Consensus 858 tP~a~~~a~~ia~--~~Df~sIGtNDLtq~~l-a~dR~~~~~~~~~y~~~~i~~~~p~~~~d~~aV~~lI~~~~~~a~~~ 934 (983)
||.++.++++|+. .+|+++||+|||++++. +.+|++.. ....| .| |.+.+++.+++.+|++
T Consensus 153 T~~gv~~~~eIAa~~rv~~L~~G~~DL~~~lg~~~~~~~~~-~~~~~----------~~----p~~~~a~~~iv~AAra- 216 (339)
T 3r4i_A 153 THGALTRVFDLAALPGVEALSFGLMDFVSAHDGAIPDTAMR-SPGQF----------DH----PLVRRAKLEISAACHA- 216 (339)
T ss_dssp SHHHHHTHHHHHTCTTEEEEEECHHHHHHTTTTSSCGGGGS-TTHHH----------HS----HHHHHHHHHHHHHHHH-
T ss_pred cHHHHHhHHHHHcCcCCCEEEECHHHHHHHhCCCcCccccC-CCccc----------cC----HHHHHHHHHHHHHHHH-
Confidence 9999999999994 49999999999999986 45665531 01111 12 5788999999999988
Q ss_pred CCCCeE--EEcCCCCCChH----HHHHHH-HcCCC-EEecCCCchHHHHHHh
Q 039683 935 RPSLKV--GICGEHGGEPS----SVAFFA-EAGLD-YVSCSPFRVPIARLAA 978 (983)
Q Consensus 935 ~~g~~v--~iCGe~a~~p~----~~~~l~-~lG~~-~~Sv~p~~i~~~r~a~ 978 (983)
+|+++ ++|+++ .|++ .+.... ++||+ ..++.|.+|+.++.+-
T Consensus 217 -aGi~~id~v~~d~-~D~~gl~~~~~~~~~~lGf~Gk~~IHP~QI~~in~~f 266 (339)
T 3r4i_A 217 -YGKVPSHNVSTEV-RDMSVVANDAARARNEFGYTRMWSIHPAQIEAIVAAF 266 (339)
T ss_dssp -TTCEEEECCCCCS-SCHHHHHHHHHHHHHTTCCSEEEESSHHHHHHHHHHT
T ss_pred -cCCCCccCCCcCC-CChHHHHHHHHHHHHhCCCCcceeeCHHHHHHHHHHh
Confidence 59999 899998 5655 667775 89999 9999999999998764
No 19
>3qqw_A Putative citrate lyase; TIM beta/alpha-barrel, structural genomics, joint center for structural genomics, JCSG, protein structure initiative; HET: MSE; 2.44A {Ralstonia eutropha}
Probab=99.51 E-value=1.5e-13 Score=153.81 Aligned_cols=173 Identities=19% Similarity=0.121 Sum_probs=133.5
Q ss_pred ccccccCCChHHHHHHHHHHHHHHHHccccCCccCcEEEeecCCCHHHHHHHHHHHHHHHHHHHHHcCCCCCceEEEEEe
Q 039683 778 RGCRLGISYPELTEMQVRAIFQAAVSMSNHRFKVFPEIMVPLVGTPQELGHQISLIRNVATKVFSEMGSSLDYKVGTMIE 857 (983)
Q Consensus 778 RGiR~~l~~p~i~~~QlrAi~rAa~~~~~~g~~~~l~ImiPmV~~~~E~~~~~~~~~~~~~~~~~~~g~~~~~~vg~MIE 857 (983)
..+|.---....+..+++++++++. .+.-.||+|||++++|++.+.+.+.+... +.|.+..+++++|||
T Consensus 85 ~~VRIN~~~t~~~~~DL~av~~~~~-------~g~dgI~LPKvesa~dv~~~~~~l~~~e~----~~G~~~~i~l~~~IE 153 (332)
T 3qqw_A 85 AGARIHDPSHPAWRQDVDIIVNGAG-------GRLAYITVPKATNSGQVAEVIRYIGDVAK----RAGLDKPVPVHVLIE 153 (332)
T ss_dssp EEEECCCTTSTTHHHHHHHHHHHST-------TCCCCEEECCCCSHHHHHHHHHHHHHHHH----HTTCSSCCCEEEEEC
T ss_pred EEEEECCCCChHHHHHHHHHHhhcc-------cCCCEEEeCCCCCHHHHHHHHHHHHHHHH----hcCCCCCeEEEEEec
Confidence 3456654456778999999998732 13458999999999999999988876432 456655689999999
Q ss_pred cHHHHHHHHHHHhh--CCEEEEcchhhhhhhhc-CcCCCccccchhhhccCCCCCCCcccCCHHHHHHHHHHHHHHhhhc
Q 039683 858 IPRAALVADEIAKE--AEFFSFGTNDLTQMTFG-YSRDDVGKFLPVYLSKGILQSDPFEVLDQKGVGQLIKIATERGRAA 934 (983)
Q Consensus 858 tP~a~~~a~~ia~~--~Df~sIGtNDLtq~~la-~dR~~~~~~~~~y~~~~i~~~~p~~~~d~~aV~~lI~~~~~~a~~~ 934 (983)
||.++.++++|++. +|+++||+|||++++.+ .+|.+.. .+ +++.| |.+..++.+++.+|++
T Consensus 154 T~~gv~~~~eIaa~~rv~~L~~G~~DL~~~lg~~~~~~~~~--~~---------g~~~~----p~l~~ar~~vv~AAra- 217 (332)
T 3qqw_A 154 THGALRDVFQIAELPNIEVLDFGLMDFVSGHHGAIPAAAMR--SP---------GQFEH----ALLVRAKADMVAAALA- 217 (332)
T ss_dssp SHHHHHTHHHHTTSTTEEEEEECHHHHHHTTTTCSCGGGGS--TT---------GGGTS----HHHHHHHHHHHHHHHH-
T ss_pred CHHHHHHHHHHhcCcCCCEEEEcHHHHHHHhCCCccccccC--CC---------CcccC----HHHHHHHHHHHHHHHH-
Confidence 99999999999954 99999999999998743 3443220 00 11122 5788999999999998
Q ss_pred CCCCeE--EEcCCCCCCh---HHHHHHH-HcCCC-EEecCCCchHHHHHHh
Q 039683 935 RPSLKV--GICGEHGGEP---SSVAFFA-EAGLD-YVSCSPFRVPIARLAA 978 (983)
Q Consensus 935 ~~g~~v--~iCGe~a~~p---~~~~~l~-~lG~~-~~Sv~p~~i~~~r~a~ 978 (983)
+|+++ ++|+++.... ..+.... ++||+ ..++.|..|+.++.+-
T Consensus 218 -aGi~~id~v~~d~~D~~gl~~~~~~~~~~lGf~Gk~~IHP~QI~~in~~f 267 (332)
T 3qqw_A 218 -NGIVPAHNVCLNLKDAEVIASDACRARNEFGFLRMWSIYPAQIQPIVNAM 267 (332)
T ss_dssp -TTCEEEECCCSCSSCHHHHHHHHHHHHHHHCCCEEEESSGGGHHHHHHHH
T ss_pred -hCCCcccCCcccccCHHHHHHHHHHHHHhCCCCcccccCHHHHHHHHHHh
Confidence 59998 8899887544 5567777 89999 9999999999998764
No 20
>3qll_A Citrate lyase; beta barrel; 2.45A {Yersinia pestis}
Probab=99.45 E-value=5.8e-13 Score=147.95 Aligned_cols=146 Identities=12% Similarity=0.081 Sum_probs=115.3
Q ss_pred HHHHHHHHHHHHHHHHccccCCccCcEEEeecCCCHHHHHHHHHHHHHHHHHHHHHcCCCCCceEEEEEecHHHHHHHHH
Q 039683 788 ELTEMQVRAIFQAAVSMSNHRFKVFPEIMVPLVGTPQELGHQISLIRNVATKVFSEMGSSLDYKVGTMIEIPRAALVADE 867 (983)
Q Consensus 788 ~i~~~QlrAi~rAa~~~~~~g~~~~l~ImiPmV~~~~E~~~~~~~~~~~~~~~~~~~g~~~~~~vg~MIEtP~a~~~a~~ 867 (983)
..+..++++++++ |. ..-+||+|||++++|++.+.+.+++. + ..+++++|||||.++.++++
T Consensus 114 ~~~~~Dl~~~l~~-------g~-~~~gIvlPKvesa~~v~~~~~~l~~~--------~--~~~~l~~~IET~~gv~~~~e 175 (316)
T 3qll_A 114 RAGIEDIHALLEC-------GS-LPDYLVLPKTESAAHLQILDRLMMFA--------G--SDTRLIGIIESVRGLNAVES 175 (316)
T ss_dssp HHHHHHHHHHHHS-------CC-CCSEEEETTCCSHHHHHHHHHHTSCC------------CCEEEEEECSHHHHHTHHH
T ss_pred chhHHHHHHHHhC-------CC-CCCEEEeCCCCCHHHHHHHHHHHHhc--------C--CCCEEEEEEcCHHHHHHHHH
Confidence 3455667887765 11 13689999999999999887655321 1 14789999999999999999
Q ss_pred HHh---hCCEEEEcchhhhhhhhcCcCCCccccchhhhccCCCCCCCcccCCHHHHHHHHHHHHHHhhhcCCCCeE--EE
Q 039683 868 IAK---EAEFFSFGTNDLTQMTFGYSRDDVGKFLPVYLSKGILQSDPFEVLDQKGVGQLIKIATERGRAARPSLKV--GI 942 (983)
Q Consensus 868 ia~---~~Df~sIGtNDLtq~~la~dR~~~~~~~~~y~~~~i~~~~p~~~~d~~aV~~lI~~~~~~a~~~~~g~~v--~i 942 (983)
|++ .+|+++||+|||+++ +|++|+. +.+..++.+++.+|++ +|+++ ++
T Consensus 176 Ia~a~~~v~~l~~G~~DL~~~-lG~~~~~------------------------~~l~~ar~~iv~Aara--aGi~~id~v 228 (316)
T 3qll_A 176 IAAATPKLAGLIFGAADMAAD-IGAASTW------------------------EPLALARARLVSACAM--NGIPAIDAP 228 (316)
T ss_dssp HHTSCTTEEEEEECHHHHHHH-HTCCSSH------------------------HHHHHHHHHHHHHHHH--HTCCEEECC
T ss_pred HHhcCCCceEEEECHHHHHHH-hCCCCCc------------------------HHHHHHHHHHHHHHHH--cCCceeecc
Confidence 998 399999999999997 5664421 4677888888899987 49988 78
Q ss_pred cCCCCCC---hHHHHHHHHcCCC-EEecCCCchHHHHHHh
Q 039683 943 CGEHGGE---PSSVAFFAEAGLD-YVSCSPFRVPIARLAA 978 (983)
Q Consensus 943 CGe~a~~---p~~~~~l~~lG~~-~~Sv~p~~i~~~r~a~ 978 (983)
|+++... ...+....++||+ ..++.|..|+.++.+-
T Consensus 229 ~~~~~D~~gl~~e~~~~r~lGf~Gk~~IHP~QI~~vn~~f 268 (316)
T 3qll_A 229 FFDVHDVSGLQSETLRASDFGFSAKAAIHPAQISTINTLF 268 (316)
T ss_dssp CSCSSCHHHHHHHHHHHHHHTCCEEEESSGGGHHHHHHHT
T ss_pred ccCcCCHHHHHHHHHHHHHCCCCeEEeeCHHHHHHHHHHh
Confidence 9887642 5677788999999 9999999999998764
No 21
>1u5h_A CITE; TIM barrel, structural genomics, PSI, protein structure initiative, TB structural genomics consortium, TBSGC, lyase; 1.65A {Mycobacterium tuberculosis} SCOP: c.1.12.5 PDB: 1u5v_A* 1z6k_A
Probab=98.94 E-value=3.2e-08 Score=107.83 Aligned_cols=127 Identities=19% Similarity=0.181 Sum_probs=97.2
Q ss_pred cEEEeecCCCHHHHHHHHHHHHHHHHHHHHHcCCCCCceEEEEEecHHHHHHHHHHHhh--CCEEEEcchhhhhhhhcCc
Q 039683 813 PEIMVPLVGTPQELGHQISLIRNVATKVFSEMGSSLDYKVGTMIEIPRAALVADEIAKE--AEFFSFGTNDLTQMTFGYS 890 (983)
Q Consensus 813 l~ImiPmV~~~~E~~~~~~~~~~~~~~~~~~~g~~~~~~vg~MIEtP~a~~~a~~ia~~--~Df~sIGtNDLtq~~la~d 890 (983)
-.||+|||++++|++.+. .+++.+|||||.++.++++|+.. +|+++||+|||+..+ |+.
T Consensus 86 ~gi~lPKv~s~~~v~~~~------------------~~~i~~~IET~~~v~~~~eIaa~~~v~~l~~G~~Dl~~~l-G~~ 146 (273)
T 1u5h_A 86 TTVMLPKAESAAQVIELA------------------PRDVIALVETARGAVCAAEIAAADPTVGMMWGAEDLIATL-GGS 146 (273)
T ss_dssp CEEEETTCCCHHHHHTTT------------------TSEEEEEECSHHHHHTHHHHHHSTTEEEEEECHHHHHHHH-TCS
T ss_pred CEEEeCCCCCHHHHHHHh------------------hCCEEEEEeCHHHHHhHHHHhcCCCCcEEEecHHHHHHHh-CCC
Confidence 589999999999998642 37899999999999999999975 999999999999765 443
Q ss_pred CCCccccchhhhccCCCCCCCcccCCHHHHHHHHHHHHHHhhhcCCCCeEE--EcCCCCCCh----HHHHHHHHcCCC-E
Q 039683 891 RDDVGKFLPVYLSKGILQSDPFEVLDQKGVGQLIKIATERGRAARPSLKVG--ICGEHGGEP----SSVAFFAEAGLD-Y 963 (983)
Q Consensus 891 R~~~~~~~~~y~~~~i~~~~p~~~~d~~aV~~lI~~~~~~a~~~~~g~~v~--iCGe~a~~p----~~~~~l~~lG~~-~ 963 (983)
+. ... ...|+ +.+...+.+++.+|++ +|+.+. +|.+. .|+ ..+.....+||+ .
T Consensus 147 ~~-~~~------------~~~~~----~~~~~a~~~iv~aara--aG~~aid~v~~~~-~d~~gl~~~~~~~~~~Gf~Gk 206 (273)
T 1u5h_A 147 SS-RRA------------DGAYR----DVARHVRSTILLAASA--FGRLALDAVHLDI-LDVEGLQEEARDAAAVGFDVT 206 (273)
T ss_dssp CS-BCT------------TSCBC----HHHHHHHHHHHHHHHH--TTCEEEECCCSCT-TCHHHHHHHHHHHHHHTCSEE
T ss_pred CC-CCc------------ccccc----HHHHHHHHHHHHHHHH--cCCCcccCCcCCC-CCHHHHHHHHHHHHhCCCCce
Confidence 31 100 00122 3688899999999987 588773 23322 466 567777899998 8
Q ss_pred EecCCCchHHHHHHh
Q 039683 964 VSCSPFRVPIARLAA 978 (983)
Q Consensus 964 ~Sv~p~~i~~~r~a~ 978 (983)
..+.|..|+.++.+-
T Consensus 207 ~~IHP~Qv~~i~~~f 221 (273)
T 1u5h_A 207 VCIHPSQIPVVRKAY 221 (273)
T ss_dssp EESSGGGHHHHHHHT
T ss_pred eecCHhHHHHHHHHc
Confidence 899999999988763
No 22
>1a3w_A Pyruvate kinase; allosteric regulation, tranferase, transfer; HET: FBP; 3.00A {Saccharomyces cerevisiae} SCOP: b.58.1.1 c.1.12.1 c.49.1.1 PDB: 1a3x_A
Probab=98.73 E-value=4.7e-08 Score=113.98 Aligned_cols=117 Identities=18% Similarity=0.086 Sum_probs=95.6
Q ss_pred cEEEeecCCCHHHHHHHHHHHHHHHHHHHHHcCCCCCceEEEEEecHHHHHHHHHHHhhCCEEEEcchhhhhhhhcCcCC
Q 039683 813 PEIMVPLVGTPQELGHQISLIRNVATKVFSEMGSSLDYKVGTMIEIPRAALVADEIAKEAEFFSFGTNDLTQMTFGYSRD 892 (983)
Q Consensus 813 l~ImiPmV~~~~E~~~~~~~~~~~~~~~~~~~g~~~~~~vg~MIEtP~a~~~a~~ia~~~Df~sIGtNDLtq~~la~dR~ 892 (983)
-.|++|||+++++++++++.+.+. + ..+.+.+|||+|.|+.++++|++.+|++.||.+||...+-
T Consensus 208 d~I~lpfV~saeDv~~~~~~l~~~--------~--~~i~IiakIEt~eav~nldeI~~~~DgImvgrgDLgvelg----- 272 (500)
T 1a3w_A 208 HMVFASFIRTANDVLTIREVLGEQ--------G--KDVKIIVKIENQQGVNNFDEILKVTDGVMVARGDLGIEIP----- 272 (500)
T ss_dssp SEEEECSCCSHHHHHHHHHHHHHH--------H--TTSEEEEEECSSHHHHSHHHHHHHSSEEEECHHHHHHHTT-----
T ss_pred CEEEECCCCCHHHHHHHHHHHHhc--------C--CCcEEEEEECChHHHHhHHHHHHhCCEEEECchHhhhhcC-----
Confidence 489999999999999999876432 1 1489999999999999999999999999999999997541
Q ss_pred CccccchhhhccCCCCCCCcccCCHHHHHHHHHHHHHHhhhcCCCCeEEEcCCC------CCChH-----HHHHHHHcCC
Q 039683 893 DVGKFLPVYLSKGILQSDPFEVLDQKGVGQLIKIATERGRAARPSLKVGICGEH------GGEPS-----SVAFFAEAGL 961 (983)
Q Consensus 893 ~~~~~~~~y~~~~i~~~~p~~~~d~~aV~~lI~~~~~~a~~~~~g~~v~iCGe~------a~~p~-----~~~~l~~lG~ 961 (983)
. +.|..+.++++.+|++ +|||+++..+| ...|. .+..++..|.
T Consensus 273 -----------------~-------~~v~~aqk~ii~aara--aGkpvi~ATQMLeSMi~~~~ptraEvsdva~av~~G~ 326 (500)
T 1a3w_A 273 -----------------A-------PEVLAVQKKLIAKSNL--AGKPVICATQMLESMTYNPRPTRAEVSDVGNAILDGA 326 (500)
T ss_dssp -----------------G-------GGHHHHHHHHHHHHHH--HTCCEEECSSTTGGGGSCSSCCHHHHHHHHHHHHHTC
T ss_pred -----------------c-------HHHHHHHHHHHHHHHh--cCCCEEEEeehhhhhccCCCchHHHHHHHHHHHHhCC
Confidence 0 2566777888889987 49999975543 34666 6688889999
Q ss_pred CEEecCCCc
Q 039683 962 DYVSCSPFR 970 (983)
Q Consensus 962 ~~~Sv~p~~ 970 (983)
|.+.++.+.
T Consensus 327 d~vmLs~et 335 (500)
T 1a3w_A 327 DCVMLSGET 335 (500)
T ss_dssp SEECBSTTT
T ss_pred CEEEecchh
Confidence 999998775
No 23
>3oyz_A Malate synthase; TIM barrel, transferase; HET: ACO; 1.95A {Haloferax volcanii} PDB: 3oyx_A* 3pug_A
Probab=98.54 E-value=3.8e-07 Score=103.71 Aligned_cols=137 Identities=15% Similarity=0.071 Sum_probs=100.8
Q ss_pred CcEEEeecCCCHHHHHHHHHHHHHHHHHHHHHcCCCC-CceEEEEEecHHH---HHHHHHHHhh-------CCEEEEcch
Q 039683 812 FPEIMVPLVGTPQELGHQISLIRNVATKVFSEMGSSL-DYKVGTMIEIPRA---ALVADEIAKE-------AEFFSFGTN 880 (983)
Q Consensus 812 ~l~ImiPmV~~~~E~~~~~~~~~~~~~~~~~~~g~~~-~~~vg~MIEtP~a---~~~a~~ia~~-------~Df~sIGtN 880 (983)
.-.||+|+|+++++++.+.+.+.... ...|.+. .+++.+|||||.+ +.++++|+.. +++++||+|
T Consensus 116 ~dgIvLPKvesa~dV~~l~~~L~~~E----~~~Gl~~G~i~lialIETa~g~~~L~na~eIAaasr~~~pRV~gL~~G~~ 191 (433)
T 3oyz_A 116 IHGFVIPEVGGIDDWKKADEFFTIVE----HEHGLDEGSLAMSVIIESGEAELAMGDLRDEMGKPTNNLERLFLLVDGEV 191 (433)
T ss_dssp CCEEEECSCCSHHHHHHHHHHHHHHH----HHTTCCTTCSEEEEEECSHHHHHHGGGHHHHHHCTTCCGGGEEEEEECHH
T ss_pred CCEEEeCCCCCHHHHHHHHHHHHHHH----HHhCCCCCCeEEEEEEeChhHHHHHHHHHHHHhhhccCCCCeEEEEECHH
Confidence 35899999999999999888775432 2457655 5899999999999 9999999953 789999999
Q ss_pred hhhhhhhcCcCCCccccchhhhccCCCCCCCcccCCHHHHHHHHHHHHHHhhhcCCCCeE--EEcCCCCCChH----HHH
Q 039683 881 DLTQMTFGYSRDDVGKFLPVYLSKGILQSDPFEVLDQKGVGQLIKIATERGRAARPSLKV--GICGEHGGEPS----SVA 954 (983)
Q Consensus 881 DLtq~~la~dR~~~~~~~~~y~~~~i~~~~p~~~~d~~aV~~lI~~~~~~a~~~~~g~~v--~iCGe~a~~p~----~~~ 954 (983)
||+..+ |+.|... ..| .+..++.+++.+|++ +|+.+ ++|... .|++ .+.
T Consensus 192 DLsasL-G~~~~~~--------------~~~-------el~~ARs~IVlAARA--aGi~aIDgV~~di-~D~egL~~ea~ 246 (433)
T 3oyz_A 192 DYTKDM-RAMTPTG--------------ELP-------AWPELRHNTSRGASA--AGCVAVDGPYDDI-RDVEGYRERMT 246 (433)
T ss_dssp HHHHHH-TCCCTTC--------------CCC-------CCHHHHHHHHHHHHH--HTCEEEECCCCCT-TCHHHHHHHHH
T ss_pred HHHHHh-CCCCCCC--------------CCH-------HHHHHHHHHHHHHHH--hCCCcccccccCC-CCHHHHHHHHH
Confidence 999765 5544221 111 233555666677776 48865 445544 4666 344
Q ss_pred HHHHcCCC-EEecCCCchHHHHHH
Q 039683 955 FFAEAGLD-YVSCSPFRVPIARLA 977 (983)
Q Consensus 955 ~l~~lG~~-~~Sv~p~~i~~~r~a 977 (983)
.-..+||+ ..++.|..|+.++.+
T Consensus 247 ~ar~lGF~GK~~IHPsQV~vIn~a 270 (433)
T 3oyz_A 247 DNQAKGMLGIWSLTPGQVVEANTS 270 (433)
T ss_dssp HHHTTTCCEEEECSHHHHHHHHHT
T ss_pred HHHhCCCCceEecCHHHHHHHHHh
Confidence 44689998 889999999998765
No 24
>1e0t_A Pyruvate kinase, PK; phosphotransferase, glycolysis, allostery; 1.8A {Escherichia coli} SCOP: b.58.1.1 c.1.12.1 c.49.1.1 PDB: 1pky_A 1e0u_A
Probab=98.25 E-value=4.5e-06 Score=96.68 Aligned_cols=117 Identities=17% Similarity=0.070 Sum_probs=88.9
Q ss_pred cEEEeecCCCHHHHHHHHHHHHHHHHHHHHHc-CCCCCceEEEEEecHHHHHHHHHHHhhCCEEEEcchhhhhhhhcCcC
Q 039683 813 PEIMVPLVGTPQELGHQISLIRNVATKVFSEM-GSSLDYKVGTMIEIPRAALVADEIAKEAEFFSFGTNDLTQMTFGYSR 891 (983)
Q Consensus 813 l~ImiPmV~~~~E~~~~~~~~~~~~~~~~~~~-g~~~~~~vg~MIEtP~a~~~a~~ia~~~Df~sIGtNDLtq~~la~dR 891 (983)
-.|++|||+++++++++++.++ +. |. .+++.+|||+|.|+.++++|++.+|++.||.+||..-+
T Consensus 187 D~I~lsfV~saeDv~~~~~~l~--------~~~~~--~i~IiakIEt~eav~nldeI~~~sDgImVargDLgvei----- 251 (470)
T 1e0t_A 187 DFVAASFIRKRSDVIEIREHLK--------AHGGE--NIHIISKIENQEGLNNFDEILEASDGIMVARGDLGVEI----- 251 (470)
T ss_dssp SEEEESSCCSHHHHHHHHHHHH--------TTTCT--TCEEEEEECSHHHHHTHHHHHHHSSEEEEEHHHHHHHS-----
T ss_pred CEEEECCCCCHHHHHHHHHHHH--------HhcCC--CceEEEEECCHHHHHhHHHHHHHCCEEEECchHhhhhc-----
Confidence 4899999999999999987653 22 32 48999999999999999999999999999999999643
Q ss_pred CCccccchhhhccCCCCCCCcccCCHHHHHHHHHHHHHHhhhcCCCCeEEEcCCCCC----Ch-------HHHHHHHHcC
Q 039683 892 DDVGKFLPVYLSKGILQSDPFEVLDQKGVGQLIKIATERGRAARPSLKVGICGEHGG----EP-------SSVAFFAEAG 960 (983)
Q Consensus 892 ~~~~~~~~~y~~~~i~~~~p~~~~d~~aV~~lI~~~~~~a~~~~~g~~v~iCGe~a~----~p-------~~~~~l~~lG 960 (983)
|+ +.|..+.++++.+|++ +|||+.+.-+|-. +| ..+.-.+--|
T Consensus 252 -------------------g~-----e~v~~~qk~ii~~ara--aGkpvI~ATQMLeSMi~~p~PTRAEvsDVanAV~dG 305 (470)
T 1e0t_A 252 -------------------PV-----EEVIFAQKMMIEKCIR--ARKVVITATMMLDSMIKNPRPTDAEAGDVANAILDG 305 (470)
T ss_dssp -------------------CH-----HHHHHHHHHHHHHHHH--HTCEEEEECC---------CCCHHHHHHHHHHHHHT
T ss_pred -------------------CH-----HHHHHHHHHHHHHHHH--cCCCEEEechhhHhhccCCCccHHHHhhhhHhhhcC
Confidence 11 3677788888899988 5999998766532 11 2233445568
Q ss_pred CCEEecCCCc
Q 039683 961 LDYVSCSPFR 970 (983)
Q Consensus 961 ~~~~Sv~p~~ 970 (983)
.|.+..|.+.
T Consensus 306 ~DavMLSgET 315 (470)
T 1e0t_A 306 TDAVMLSGES 315 (470)
T ss_dssp CSEEEECCC-
T ss_pred ccEEEecccc
Confidence 9988887654
No 25
>2e28_A Pyruvate kinase, PK; allosteric, transferase; 2.40A {Geobacillus stearothermophilus}
Probab=98.14 E-value=9.3e-06 Score=96.66 Aligned_cols=143 Identities=20% Similarity=0.166 Sum_probs=101.0
Q ss_pred CccccccCCChHHHHHHHHHHHHHHHHccccCCccCcEEEeecCCCHHHHHHHHHHHHHHHHHHHHHcCCCCCceEEEEE
Q 039683 777 FRGCRLGISYPELTEMQVRAIFQAAVSMSNHRFKVFPEIMVPLVGTPQELGHQISLIRNVATKVFSEMGSSLDYKVGTMI 856 (983)
Q Consensus 777 ~RGiR~~l~~p~i~~~QlrAi~rAa~~~~~~g~~~~l~ImiPmV~~~~E~~~~~~~~~~~~~~~~~~~g~~~~~~vg~MI 856 (983)
+.|+.+.+ |-+.+-....|..+.. .|+ -.|++|||+++++++++++.++ +.|.. ++.+.++|
T Consensus 161 lPg~~~~l--p~ltekD~~di~~~l~----~g~---d~v~~sfV~~a~dv~~~~~~l~--------~~~~~-~~~iiakI 222 (587)
T 2e28_A 161 VPGVKVNL--PGITEKDRADILFGIR----QGI---DFIAASFVRRASDVLEIRELLE--------AHDAL-HIQIIAKI 222 (587)
T ss_dssp CTTSCCCC--CSCCHHHHHHHHHHHH----HTC---SEEEESSCCSHHHHHHHHHHHH--------HTTCT-TSEEEEEE
T ss_pred cCCCcCCC--CCCCcccHHHHHHHHH----cCC---CEEEECCCCCHHHHHHHHHHHH--------HcCCC-CceEEEEE
Confidence 44554433 4444444445555533 232 4899999999999999998753 23321 48999999
Q ss_pred ecHHHHHHHHHHHhhCCEEEEcchhhhhhhhcCcCCCccccchhhhccCCCCCCCcccCCHHHHHHHHHHHHHHhhhcCC
Q 039683 857 EIPRAALVADEIAKEAEFFSFGTNDLTQMTFGYSRDDVGKFLPVYLSKGILQSDPFEVLDQKGVGQLIKIATERGRAARP 936 (983)
Q Consensus 857 EtP~a~~~a~~ia~~~Df~sIGtNDLtq~~la~dR~~~~~~~~~y~~~~i~~~~p~~~~d~~aV~~lI~~~~~~a~~~~~ 936 (983)
|+|.|+.++|+|++.+|++.||..||...+ |+ +.|..+.++++++|++ +
T Consensus 223 E~~eav~nldeIl~~~DgImVargDLgvei------------------------~~-----~~v~~~qk~ii~~~~~--~ 271 (587)
T 2e28_A 223 ENEEGVANIDEILEAADGLMVARGDLGVEI------------------------PA-----EEVPLIQKLLIKKSNM--L 271 (587)
T ss_dssp CSHHHHHTHHHHHHHSSEEEEEHHHHHHHS------------------------CG-----GGHHHHHHHHHHHHHH--H
T ss_pred CCHHHHHhHHHHHHhCCEEEEcCchhhhhc------------------------CH-----HHHHHHHHHHHHHHHH--c
Confidence 999999999999999999999999999744 11 2556677888889987 4
Q ss_pred CCeEEEcCCCCC----Ch-------HHHHHHHHcCCCEEecCC
Q 039683 937 SLKVGICGEHGG----EP-------SSVAFFAEAGLDYVSCSP 968 (983)
Q Consensus 937 g~~v~iCGe~a~----~p-------~~~~~l~~lG~~~~Sv~p 968 (983)
||||++.-+|-. +| ..+.-.+--|.|.+..|.
T Consensus 272 gkpvi~ATQmLeSMi~~p~PTRAE~sDvanav~dG~DavMLSg 314 (587)
T 2e28_A 272 GKPVITATQMLDSMQRNPRPTRAEASDVANAIFDGTDAVMLSG 314 (587)
T ss_dssp TCCEEEESSSSGGGGTCSSCCHHHHHHHHHHHHHTCSEEEESH
T ss_pred CCCeEEechhhHhhccCCCccHHHHhccchhhhhCcceeeecc
Confidence 999999777532 22 233344555888887753
No 26
>3hqn_D Pyruvate kinase, PK; TIM barrel, T-state enzyme, transferase, allosteric enzyme, binding, glycolysis, magnesium, metal-binding, NUCL binding; 2.00A {Leishmania mexicana} PDB: 1pkl_A 3hqo_K* 3hqp_A* 3hqq_A* 3is4_A* 3ktx_A* 3qv6_A* 3qv7_D* 3qv8_D* 3srk_A* 3e0w_A 3e0v_A 3pp7_A* 3qv9_A*
Probab=97.83 E-value=4.4e-05 Score=88.77 Aligned_cols=115 Identities=19% Similarity=0.139 Sum_probs=90.9
Q ss_pred cEEEeecCCCHHHHHHHHHHHHHHHHHHHHHcCCCCCceEEEEEecHHHHHHHHHHHhhCCEEEEcchhhhhhhhcCcCC
Q 039683 813 PEIMVPLVGTPQELGHQISLIRNVATKVFSEMGSSLDYKVGTMIEIPRAALVADEIAKEAEFFSFGTNDLTQMTFGYSRD 892 (983)
Q Consensus 813 l~ImiPmV~~~~E~~~~~~~~~~~~~~~~~~~g~~~~~~vg~MIEtP~a~~~a~~ia~~~Df~sIGtNDLtq~~la~dR~ 892 (983)
-.|.+|||+++++++.+++.+.+ .| ..+++.++||+|.|+.++++|++.+|++.||..||..-+
T Consensus 207 D~i~~sfVr~a~dv~~~r~~l~~--------~~--~~i~IiaKIE~~eav~nldeIl~~sDgImVaRGDLgvEi------ 270 (499)
T 3hqn_D 207 DMIFASFIRSAEQVGDVRKALGP--------KG--RDIMIICKIENHQGVQNIDSIIEESDGIMVARGDLGVEI------ 270 (499)
T ss_dssp SEEEETTCCSHHHHHHHHHHHCG--------GG--TTSEEEEEECSHHHHHTHHHHHHHSSEEEEEHHHHHHHS------
T ss_pred CEEEecCCCCHHHHHHHHHHHHh--------cC--CCCeEEEEECCHHHHHhHHHHHHhCCcEEEccccccCcC------
Confidence 48999999999999999876532 22 258999999999999999999999999999999999633
Q ss_pred CccccchhhhccCCCCCCCcccCCHHHHHHHHHHHHHHhhhcCCCCeEEEcCCCCC------ChHHH-----HHHHHcCC
Q 039683 893 DVGKFLPVYLSKGILQSDPFEVLDQKGVGQLIKIATERGRAARPSLKVGICGEHGG------EPSSV-----AFFAEAGL 961 (983)
Q Consensus 893 ~~~~~~~~y~~~~i~~~~p~~~~d~~aV~~lI~~~~~~a~~~~~g~~v~iCGe~a~------~p~~~-----~~l~~lG~ 961 (983)
|+ +.|..+.++++.+|++ +||||.+.-+|-. .|..+ ...+--|.
T Consensus 271 ------------------~~-----e~vp~~Qk~iI~~c~~--agkpVi~ATQmLeSMi~~p~PTRAEvsDVanaV~dG~ 325 (499)
T 3hqn_D 271 ------------------PA-----EKVVVAQKILISKCNV--AGKPVICATQMLESMTYNPRPTRAEVSDVANAVFNGA 325 (499)
T ss_dssp ------------------CH-----HHHHHHHHHHHHHHHH--HTCCEEEESSSSGGGGTSSSCCHHHHHHHHHHHHHTC
T ss_pred ------------------CH-----HHHHHHHHHHHHHHHH--cCCCeEEeehhHHHhccCCCccHHHHHHHHHHHHcCC
Confidence 11 3677777888999987 4999998666532 33333 55677799
Q ss_pred CEEecCC
Q 039683 962 DYVSCSP 968 (983)
Q Consensus 962 ~~~Sv~p 968 (983)
|.+..|.
T Consensus 326 DavMLSg 332 (499)
T 3hqn_D 326 DCVMLSG 332 (499)
T ss_dssp SEEEESH
T ss_pred cEEEEec
Confidence 9998754
No 27
>3gr4_A Pyruvate kinase isozymes M1/M2; activator, acetylation, allosteric enzyme, alternative splicing, glycolysis, magnesium, metal-binding; HET: FBP TLA DYY ADP; 1.60A {Homo sapiens} PDB: 3gqy_A* 3h6o_A* 3me3_A* 3srh_A 3srd_A 1zjh_A 4b2d_A* 4b2d_D* 3u2z_A* 3g2g_A 1t5a_A* 3bjt_A 4g1n_A* 3bjf_A* 3srf_C 1f3x_A 3n25_A 1f3w_A 1a49_A* 1a5u_A* ...
Probab=97.81 E-value=9.4e-05 Score=86.79 Aligned_cols=115 Identities=17% Similarity=0.131 Sum_probs=88.4
Q ss_pred cEEEeecCCCHHHHHHHHHHHHHHHHHHHHHcCCCCCceEEEEEecHHHHHHHHHHHhhCCEEEEcchhhhhhhhcCcCC
Q 039683 813 PEIMVPLVGTPQELGHQISLIRNVATKVFSEMGSSLDYKVGTMIEIPRAALVADEIAKEAEFFSFGTNDLTQMTFGYSRD 892 (983)
Q Consensus 813 l~ImiPmV~~~~E~~~~~~~~~~~~~~~~~~~g~~~~~~vg~MIEtP~a~~~a~~ia~~~Df~sIGtNDLtq~~la~dR~ 892 (983)
-.|.+|||+++++++.+++.+. +.|. .+++.++||+|.|+.++++|++.+|++.||..||..-+
T Consensus 257 D~ia~SfVr~a~Dv~~~r~~L~--------~~g~--~i~IIAKIE~~eav~nldeIl~~sDgImVaRGDLgvei------ 320 (550)
T 3gr4_A 257 DMVFASFIRKASDVHEVRKVLG--------EKGK--NIKIISKIENHEGVRRFDEILEASDGIMVARGDLGIEI------ 320 (550)
T ss_dssp SEEEETTCCSHHHHHHHHHHHT--------TTTT--TSEEEEEECSHHHHHTHHHHHHHSSEEEEEHHHHHHHS------
T ss_pred CEEEecCCCCHHHHHHHHHHHH--------hcCC--CceEEEEeCCHHHHHHHHHHHHhCCEEEEccchhcccC------
Confidence 4799999999999999887652 2232 58999999999999999999999999999999998643
Q ss_pred CccccchhhhccCCCCCCCcccCCHHHHHHHHHHHHHHhhhcCCCCeEEEcCCCCC------ChHHH-----HHHHHcCC
Q 039683 893 DVGKFLPVYLSKGILQSDPFEVLDQKGVGQLIKIATERGRAARPSLKVGICGEHGG------EPSSV-----AFFAEAGL 961 (983)
Q Consensus 893 ~~~~~~~~y~~~~i~~~~p~~~~d~~aV~~lI~~~~~~a~~~~~g~~v~iCGe~a~------~p~~~-----~~l~~lG~ 961 (983)
|+ +.|..+.++++.+|++ +||||.+.-+|-. .|..+ ...+--|.
T Consensus 321 ------------------~~-----e~vp~~Qk~iI~~c~~--agkpVi~ATQMLeSMi~~p~PTRAEvsDVanAvldG~ 375 (550)
T 3gr4_A 321 ------------------PA-----EKVFLAQKMMIGRCNR--AGKPVICATQMLESMIKKPRPTRAEGSDVANAVLDGA 375 (550)
T ss_dssp ------------------CG-----GGHHHHHHHHHHHHHH--HTCCEEEESSTTGGGGTCSSCCHHHHHHHHHHHHHTC
T ss_pred ------------------CH-----HHHHHHHHHHHHHHHH--hCCCEEEEehhhHHhhcCCCccHHHHHHHHHHHHcCC
Confidence 11 1355666788888887 4999997666531 23333 55566799
Q ss_pred CEEecCC
Q 039683 962 DYVSCSP 968 (983)
Q Consensus 962 ~~~Sv~p 968 (983)
|.+..|.
T Consensus 376 DavMLSg 382 (550)
T 3gr4_A 376 DCIMLSG 382 (550)
T ss_dssp SEEEESH
T ss_pred cEEEEec
Confidence 9998754
No 28
>3qtg_A Pyruvate kinase, PK; TIM barrel, glycolysis, transferase; 2.20A {Pyrobaculum aerophilum}
Probab=97.75 E-value=9.4e-05 Score=85.10 Aligned_cols=114 Identities=14% Similarity=0.159 Sum_probs=90.7
Q ss_pred cEEEeecCCCHHHHHHHHHHHHHHHHHHHHHcCCCCCceEEEEEecHHHHHHHHHHHhhCCEEEEcchhhhhhhhcCcCC
Q 039683 813 PEIMVPLVGTPQELGHQISLIRNVATKVFSEMGSSLDYKVGTMIEIPRAALVADEIAKEAEFFSFGTNDLTQMTFGYSRD 892 (983)
Q Consensus 813 l~ImiPmV~~~~E~~~~~~~~~~~~~~~~~~~g~~~~~~vg~MIEtP~a~~~a~~ia~~~Df~sIGtNDLtq~~la~dR~ 892 (983)
-.|.+|||+++++++.+++.+.+ .|. .+++.++||+|.|+.++|+|++.+|++.||..||..-+
T Consensus 198 D~Ia~SfVr~a~Dv~~~r~~l~~--------~g~--~~~iiaKIE~~eav~nldeIl~~sDgImVaRGDLgvei------ 261 (461)
T 3qtg_A 198 DYVAISLAKSCKDVDSVRSLLTE--------LGF--QSQVAVKIETKGAVNNLEELVQCSDYVVVARGDLGLHY------ 261 (461)
T ss_dssp CEEEECSCCSHHHHHHHHHHHHH--------TTC--CCEEEEEECSHHHHHTHHHHHHTCSEEEEEHHHHTTTS------
T ss_pred CEEEecCCCCHHHHHHHHHHHHh--------cCC--CceEEEEECCHHHHHhHHHHHHhcccEEEccccccccC------
Confidence 48999999999999999876532 333 48999999999999999999999999999999998422
Q ss_pred CccccchhhhccCCCCCCCcccCCHHHHHHHHHHHHHHhhhcCCCCeEEEcCCCCC------ChHH-----HHHHHHcCC
Q 039683 893 DVGKFLPVYLSKGILQSDPFEVLDQKGVGQLIKIATERGRAARPSLKVGICGEHGG------EPSS-----VAFFAEAGL 961 (983)
Q Consensus 893 ~~~~~~~~y~~~~i~~~~p~~~~d~~aV~~lI~~~~~~a~~~~~g~~v~iCGe~a~------~p~~-----~~~l~~lG~ 961 (983)
|+ +.|..+.++++.+|++ +||||.+.-+|-. .|.. +...+--|.
T Consensus 262 ------------------~~-----e~v~~~Qk~ii~~~~~--~gkpvi~ATQMLeSMi~~p~PTRAEvsDVanAV~dGa 316 (461)
T 3qtg_A 262 ------------------GL-----DALPIVQRRIVHTSLK--YGKPIAVATQLLDSMQSSPIPTRAEINDVFTTASMGV 316 (461)
T ss_dssp ------------------CT-----TTHHHHHHHHHHHHHH--TTCCEEEESSSSGGGGTCSSCCHHHHHHHHHHHHTTC
T ss_pred ------------------CH-----HHHHHHHHHHHHHHHH--hCCCEEEeccchHhhccCCCccHHHHHHHHHHHHhCC
Confidence 22 2566778888889987 5999998776632 3333 366677899
Q ss_pred CEEecC
Q 039683 962 DYVSCS 967 (983)
Q Consensus 962 ~~~Sv~ 967 (983)
|.+..|
T Consensus 317 DavMLS 322 (461)
T 3qtg_A 317 DSLWLT 322 (461)
T ss_dssp SEEEEC
T ss_pred cEEEEc
Confidence 999877
No 29
>3khd_A Pyruvate kinase; malaria, structural genomics, structural GE consortium, SGC, transferase; 2.70A {Plasmodium falciparum 3D7}
Probab=97.58 E-value=0.00026 Score=82.59 Aligned_cols=143 Identities=16% Similarity=0.129 Sum_probs=99.8
Q ss_pred CccccccCCChHHHHHHHHHHHHHHHHccccCCccCcEEEeecCCCHHHHHHHHHHHHHHHHHHHHHcCCCCCceEEEEE
Q 039683 777 FRGCRLGISYPELTEMQVRAIFQAAVSMSNHRFKVFPEIMVPLVGTPQELGHQISLIRNVATKVFSEMGSSLDYKVGTMI 856 (983)
Q Consensus 777 ~RGiR~~l~~p~i~~~QlrAi~rAa~~~~~~g~~~~l~ImiPmV~~~~E~~~~~~~~~~~~~~~~~~~g~~~~~~vg~MI 856 (983)
+.|+.+.+ |-+.+--.+-|.+-+.+ +|+ -.|.+|||+++++++.+++.+. +.| ..+++.++|
T Consensus 204 lPg~~~~l--p~lTekD~~dl~~f~~~---~~v---D~Ia~SFVr~a~Dv~~~r~~l~--------~~g--~~i~IIAKI 265 (520)
T 3khd_A 204 LPNVKVDL--PIISEKDKNDILNFAIP---MGC---NFIAASFIQSADDVRLIRNLLG--------PRG--RHIKIIPKI 265 (520)
T ss_dssp CTTSCCCS--CSSCHHHHHHHHHTHHH---HTC---CEEEETTCCSHHHHHHHHHHHT--------TTT--TTSEEEEEE
T ss_pred cCCCcCCC--CCCCHHHHHHHHHHHHH---cCC---CEEEECCCCCHHHHHHHHHHHH--------hcC--CCCcEEEEE
Confidence 34554443 44444444555232232 232 4799999999999999887653 223 258999999
Q ss_pred ecHHHHHHHHHHHhhCCEEEEcchhhhhhhhcCcCCCccccchhhhccCCCCCCCcccCCHHHHHHHHHHHHHHhhhcCC
Q 039683 857 EIPRAALVADEIAKEAEFFSFGTNDLTQMTFGYSRDDVGKFLPVYLSKGILQSDPFEVLDQKGVGQLIKIATERGRAARP 936 (983)
Q Consensus 857 EtP~a~~~a~~ia~~~Df~sIGtNDLtq~~la~dR~~~~~~~~~y~~~~i~~~~p~~~~d~~aV~~lI~~~~~~a~~~~~ 936 (983)
|+|.|+.++|+|++.+|++.||..||..-+ |+ +.|..+-++++.+|++ +
T Consensus 266 E~~eav~nldeIl~~sDGIMVARGDLgvEi------------------------~~-----e~vp~~Qk~iI~~c~~--a 314 (520)
T 3khd_A 266 ENIEGIIHFDKILAESDGIMIARGDLGMEI------------------------SP-----EKVFLAQKLMISKCNL--Q 314 (520)
T ss_dssp CSHHHHHTHHHHHHHSSCEEECHHHHTTTS------------------------CG-----GGHHHHHHHHHHHHHH--H
T ss_pred CCHHHHHhHHHHHHhCCcEEEccccccccC------------------------CH-----HHHHHHHHHHHHHHHH--c
Confidence 999999999999999999999999997422 22 2455666888888887 4
Q ss_pred CCeEEEcCCCCC------ChHHH-----HHHHHcCCCEEecCC
Q 039683 937 SLKVGICGEHGG------EPSSV-----AFFAEAGLDYVSCSP 968 (983)
Q Consensus 937 g~~v~iCGe~a~------~p~~~-----~~l~~lG~~~~Sv~p 968 (983)
||||.+.-+|-. .|..+ ...+--|.|.+..|.
T Consensus 315 GKPVi~ATQMLeSMi~~p~PTRAEvsDVanAVldGaDavMLSg 357 (520)
T 3khd_A 315 GKPIITATQMLESMTKNPRPTRAEVTDVANAVLDGTDCVMLSG 357 (520)
T ss_dssp TCCEEECCCCCGGGGTCSSCCHHHHHHHHHHHHHTCSEEEESH
T ss_pred CCCeEEeehhhHHHhcCCCccHHHHHHHHHHHHhCCCEEEecc
Confidence 999997655531 33333 555667999998764
No 30
>3gg8_A Pyruvate kinase; malaria, genomics, proteomics, glycolysis, magnesium, transferase, structural genomics, STRU genomics consortium, SGC; 2.21A {Toxoplasma gondii} PDB: 3eoe_A
Probab=97.50 E-value=0.00017 Score=84.05 Aligned_cols=115 Identities=21% Similarity=0.122 Sum_probs=90.9
Q ss_pred cEEEeecCCCHHHHHHHHHHHHHHHHHHHHHcCCCCCceEEEEEecHHHHHHHHHHHhhCCEEEEcchhhhhhhhcCcCC
Q 039683 813 PEIMVPLVGTPQELGHQISLIRNVATKVFSEMGSSLDYKVGTMIEIPRAALVADEIAKEAEFFSFGTNDLTQMTFGYSRD 892 (983)
Q Consensus 813 l~ImiPmV~~~~E~~~~~~~~~~~~~~~~~~~g~~~~~~vg~MIEtP~a~~~a~~ia~~~Df~sIGtNDLtq~~la~dR~ 892 (983)
-.|.+|||+++++++.+++.+.+ .|. .+++.++||+|.|+.++++|++.+|++.||..||..-+
T Consensus 223 D~Ia~SFVr~a~Dv~~~r~~l~~--------~~~--~~~iiaKIE~~eav~nldeIl~~sDgimVaRGDLgvei------ 286 (511)
T 3gg8_A 223 NFIAASFVQSADDVRYIRGLLGP--------RGR--HIRIIPKIENVEGLVNFDEILAEADGIMIARGDLGMEI------ 286 (511)
T ss_dssp CEEEETTCCSHHHHHHHHHHHTG--------GGT--TCEEEEEECSHHHHHTHHHHHHHCSCEEEEHHHHHHHS------
T ss_pred CEEEEcCCCCHHHHHHHHHHHHh--------cCC--CCeEEEEECCHHHHHhHHHHHHhCCeEEEecchhcCcC------
Confidence 47999999999999998876532 232 58999999999999999999999999999999998533
Q ss_pred CccccchhhhccCCCCCCCcccCCHHHHHHHHHHHHHHhhhcCCCCeEEEcCCCCC------ChHH-----HHHHHHcCC
Q 039683 893 DVGKFLPVYLSKGILQSDPFEVLDQKGVGQLIKIATERGRAARPSLKVGICGEHGG------EPSS-----VAFFAEAGL 961 (983)
Q Consensus 893 ~~~~~~~~y~~~~i~~~~p~~~~d~~aV~~lI~~~~~~a~~~~~g~~v~iCGe~a~------~p~~-----~~~l~~lG~ 961 (983)
|+ +.|..+.++++.+|++ +||||.+.-+|-. .|.. +...+--|.
T Consensus 287 ------------------~~-----e~v~~~qk~ii~~~~~--~gkpvi~ATQmLeSMi~~p~PTRAEvsDVAnAV~dGa 341 (511)
T 3gg8_A 287 ------------------PP-----EKVFLAQKMMIAKCNV--VGKPVITATQMLESMIKNPRPTRAEAADVANAVLDGT 341 (511)
T ss_dssp ------------------CH-----HHHHHHHHHHHHHHHH--TTCCEEEESSSSGGGGTCSSCCHHHHHHHHHHHHHTC
T ss_pred ------------------CH-----HHHHHHHHHHHHHHHH--cCCCeEEehHHHHHhhcCCCccHHHHHHHHHHHHhCC
Confidence 11 4677888899999987 5999998766642 2333 355566799
Q ss_pred CEEecCC
Q 039683 962 DYVSCSP 968 (983)
Q Consensus 962 ~~~Sv~p 968 (983)
|.+..|.
T Consensus 342 DavMLSg 348 (511)
T 3gg8_A 342 DCVMLSG 348 (511)
T ss_dssp SEEEESH
T ss_pred CEEEecc
Confidence 9988754
No 31
>3cux_A Malate synthase; TIM barrel, glyoxylate bypass, transferase, tricarboxylic acid cycle; 1.70A {Bacillus anthracis}
Probab=97.50 E-value=0.00094 Score=78.24 Aligned_cols=151 Identities=19% Similarity=0.134 Sum_probs=95.2
Q ss_pred cEEEeecCCCHHHHHHHHHHHHHHHHHHHHHcCCCC-CceEEEEEecHHHHHHHHHHHhh----CCEEEEcchhhhhhhh
Q 039683 813 PEIMVPLVGTPQELGHQISLIRNVATKVFSEMGSSL-DYKVGTMIEIPRAALVADEIAKE----AEFFSFGTNDLTQMTF 887 (983)
Q Consensus 813 l~ImiPmV~~~~E~~~~~~~~~~~~~~~~~~~g~~~-~~~vg~MIEtP~a~~~a~~ia~~----~Df~sIGtNDLtq~~l 887 (983)
+.|++|++.+++|++.+.+.+..+.. ..|++. .+++++||||+.+++++++|+.. +.|+..|..|++-.+.
T Consensus 205 pyi~LPK~es~~Ev~~~~~lf~~~E~----~lGlp~gtIki~vlIET~~a~~n~~eI~~a~~~rv~gLn~G~~Dy~~s~i 280 (528)
T 3cux_A 205 PYFYLPKMESYLEARLWNDVFVFAQK----YIGIPNGTIKATVLLETIHASFEMDEILYELKDHSAGLNCGRWDYIFSFL 280 (528)
T ss_dssp CEEEECCCCSHHHHHHHHHHHHHHHH----HHTCCTTCCEEEEEECSHHHHTSHHHHHHHTGGGEEEEEECSHHHHHHHH
T ss_pred CEEEccCCCCHHHHHHHHHHHHHHHH----HhCCCCCceEEEEEeCCHHHHHhHHHHHHhccCceeEEecCHHHHHHHhh
Confidence 59999999999999998888765433 457765 58999999999999999999854 7799999999998875
Q ss_pred cCcCCCccccchhhhccCCCCCCCcccCCHHHHHHHHHHHHHHhhhcCCCCeEEEcCCCC-----CChH----HH-----
Q 039683 888 GYSRDDVGKFLPVYLSKGILQSDPFEVLDQKGVGQLIKIATERGRAARPSLKVGICGEHG-----GEPS----SV----- 953 (983)
Q Consensus 888 a~dR~~~~~~~~~y~~~~i~~~~p~~~~d~~aV~~lI~~~~~~a~~~~~g~~v~iCGe~a-----~~p~----~~----- 953 (983)
...+.+...+++ ....+-..+||. ..--+..+.+|++ .|+. .|=|-.+ .||+ ..
T Consensus 281 ~t~~~~~~~vlp--dR~~v~~~~p~~-------~ay~~~lV~ac~a--~G~~-aIgGm~a~ip~~~D~~~n~~~~~~~~~ 348 (528)
T 3cux_A 281 KAFRNHNEFLLP--DRAQVTMTAPFM-------RAYSLKVIQTCHR--RNAP-AIGGMAAQIPIKNNPEANEAAFEKVRA 348 (528)
T ss_dssp HHTTTCTTCCCC--CGGGCCTTSHHH-------HHHHHHHHHHHHH--TTCC-EEC-------------------CHHHH
T ss_pred hhccCCccccch--hhhhcccccHHH-------HHHHHHHHHHHHH--cCCC-CcccccccCcCcCChHHHHHHHHHHHH
Confidence 433333211111 001111134443 3333444566776 4763 3434222 1332 11
Q ss_pred --HHHHHcCCC-EEecCCCchHHHHHHhh
Q 039683 954 --AFFAEAGLD-YVSCSPFRVPIARLAAA 979 (983)
Q Consensus 954 --~~l~~lG~~-~~Sv~p~~i~~~r~a~a 979 (983)
..=..+|++ .-..+|..++++..+-+
T Consensus 349 dk~~~~~~GfdGkwviHP~qv~~a~~vF~ 377 (528)
T 3cux_A 349 DKEREALDGHDGTWVAHPGLVPVAMEVFN 377 (528)
T ss_dssp HHHHHHHHTCSBEEESSGGGHHHHHHHHH
T ss_pred HHHHHHhCCCCcccccCHHHHHHHHHHHh
Confidence 122689998 56668889988766544
No 32
>3t05_A Pyruvate kinase, PK; tetramer, glycolysis, transferase; 3.05A {Staphylococcus aureus subsp} PDB: 3t07_A* 3t0t_A*
Probab=97.43 E-value=0.00046 Score=82.12 Aligned_cols=114 Identities=17% Similarity=0.063 Sum_probs=89.0
Q ss_pred cEEEeecCCCHHHHHHHHHHHHHHHHHHHHHcCCCCCceEEEEEecHHHHHHHHHHHhhCCEEEEcchhhhhhhhcCcCC
Q 039683 813 PEIMVPLVGTPQELGHQISLIRNVATKVFSEMGSSLDYKVGTMIEIPRAALVADEIAKEAEFFSFGTNDLTQMTFGYSRD 892 (983)
Q Consensus 813 l~ImiPmV~~~~E~~~~~~~~~~~~~~~~~~~g~~~~~~vg~MIEtP~a~~~a~~ia~~~Df~sIGtNDLtq~~la~dR~ 892 (983)
-.|.++||+++++++.+++.+.+ .|. ++++.++||+|.|+.++|+|++.+|++.|+..||..-+
T Consensus 208 D~Ia~SFVr~a~Dv~~~r~~l~~--------~~~--~i~IiaKIE~~eav~nldeIl~~sDGImVARGDLgvei------ 271 (606)
T 3t05_A 208 DFIAASFVRRPSDVLEIREILEE--------QKA--NISVFPKIENQEGIDNIEEILEVSDGLMVARGDMGVEI------ 271 (606)
T ss_dssp SEEEETTCCSHHHHHHHHHHHHH--------TTC--CCEEEECCCSHHHHHTHHHHHHHCSCEEEEHHHHHHHS------
T ss_pred CEEEECCCCCHHHHHHHHHHHHh--------cCC--CCeEEEEeCCHHHHHhHHHHHHhCCEEEEccccccCcC------
Confidence 47999999999999999876532 332 58999999999999999999999999999999998633
Q ss_pred CccccchhhhccCCCCCCCcccCCHHHHHHHHHHHHHHhhhcCCCCeEEEcCCCCC------ChHH-----HHHHHHcCC
Q 039683 893 DVGKFLPVYLSKGILQSDPFEVLDQKGVGQLIKIATERGRAARPSLKVGICGEHGG------EPSS-----VAFFAEAGL 961 (983)
Q Consensus 893 ~~~~~~~~y~~~~i~~~~p~~~~d~~aV~~lI~~~~~~a~~~~~g~~v~iCGe~a~------~p~~-----~~~l~~lG~ 961 (983)
|+ +.|..+.++++.+|++ +||||.+.-+|-. .|.. +...+--|.
T Consensus 272 ------------------~~-----e~vp~~Qk~ii~~~~~--~gkpvi~ATQMLeSMi~~p~PTRAEvsDVanAv~dGa 326 (606)
T 3t05_A 272 ------------------PP-----EKVPMVQKDLIRQCNK--LGKPVITATQMLDSMQRNPRATRAEASDVANAIYDGT 326 (606)
T ss_dssp ------------------CG-----GGHHHHHHHHHHHHHH--HTCCEEEESSSSGGGTTCSSCCHHHHHHHHHHHHHTC
T ss_pred ------------------CH-----HHHHHHHHHHHHHHHH--cCCCeEEehHHHHHhhcCCCccHHHHHHHHHHHHcCC
Confidence 11 2455666888888987 4999998666532 2333 355566799
Q ss_pred CEEecC
Q 039683 962 DYVSCS 967 (983)
Q Consensus 962 ~~~Sv~ 967 (983)
|.+..|
T Consensus 327 DavMLS 332 (606)
T 3t05_A 327 DAVMLS 332 (606)
T ss_dssp SEEEEC
T ss_pred CEEEec
Confidence 998877
No 33
>1p7t_A MSG, malate synthase G; TIM barrel, glyoxylate cycle, acetyl-COA, cysteine-sulfenic lyase; HET: ACO PG4; 1.95A {Escherichia coli str} SCOP: c.1.13.1 PDB: 1y8b_A 1d8c_A* 2jqx_A
Probab=97.34 E-value=0.00098 Score=79.45 Aligned_cols=142 Identities=22% Similarity=0.189 Sum_probs=93.1
Q ss_pred CcEEEeecCCCHHHHHHHHHHHHHHHHHHHHHcCCCC-CceEEEEEecHHHHHHHHHHHh----hCCEEEEcchhhhhhh
Q 039683 812 FPEIMVPLVGTPQELGHQISLIRNVATKVFSEMGSSL-DYKVGTMIEIPRAALVADEIAK----EAEFFSFGTNDLTQMT 886 (983)
Q Consensus 812 ~l~ImiPmV~~~~E~~~~~~~~~~~~~~~~~~~g~~~-~~~vg~MIEtP~a~~~a~~ia~----~~Df~sIGtNDLtq~~ 886 (983)
...|++|++.+++|++.+.+++..+.. ..|++. .+++++||||+.+++++++|+. .+.|+.+|.+|++-.+
T Consensus 385 ~~yIvLPKmespeEV~~~~~lf~~~E~----~lGlp~gTIKi~vLIET~ra~~nl~EI~~aa~~Rv~gLn~G~~Dyt~d~ 460 (731)
T 1p7t_A 385 SVYIVKPKMHGPQEVAFANKLFTRIET----MLGMAPNTLKMGIMDEERRTSLNLRSCIAQARNRVAFINTGFLDRTGDE 460 (731)
T ss_dssp CEEEEECSCCSHHHHHHHHHHHHHHHH----HTTCCTTCEEEEEEECSHHHHTTHHHHHHTTTTTEEEEEECHHHHHHHH
T ss_pred CcEEEeCCCCCHHHHHHHHHHHHHHHH----hhCCCCCceEEEEEECCHHHHHhHHHHHHhhccceEEEEcCHHHHhhhh
Confidence 469999999999999998887765432 457765 6899999999999999999964 2789999999999888
Q ss_pred hcCcCCCccccchhhhccCCCCCCCcccCCHHHHHHHHHHHHH---HhhhcCCCCeEEEc-CCCCCChHHHHHH------
Q 039683 887 FGYSRDDVGKFLPVYLSKGILQSDPFEVLDQKGVGQLIKIATE---RGRAARPSLKVGIC-GEHGGEPSSVAFF------ 956 (983)
Q Consensus 887 la~dR~~~~~~~~~y~~~~i~~~~p~~~~d~~aV~~lI~~~~~---~a~~~~~g~~v~iC-Ge~a~~p~~~~~l------ 956 (983)
++..|... .|. ..+.....||. .+. .+..+. +|++ +|+. .|= | |..+|.....+
T Consensus 461 I~t~~~~~-~~v----R~~~t~~~~~~----~AY---~r~~V~~gLAcra--aG~~-aIgkG-m~a~p~dmeg~~~dk~~ 524 (731)
T 1p7t_A 461 MHSVMEAG-PML----RKNQMKSTPWI----KAY---ERNNVLSGLFCGL--RGKA-QIGKG-MWAMPDLMADMYSQKGD 524 (731)
T ss_dssp HHHTGGGS-CBC----CGGGSTTCHHH----HHH---HHHHHHHHHHTTC--TTTS-EEEEC-CCCCTTCHHHHHHHTHH
T ss_pred hcccccCC-ccc----ccccccchHHH----HHH---HHHhhhhHHHHHH--cCCC-Ccccc-cccChhhHHHHHHHHHH
Confidence 77665432 121 11111123322 122 222232 6765 4764 343 4 55566555444
Q ss_pred -HHcCCCEEec-CCCchHH
Q 039683 957 -AEAGLDYVSC-SPFRVPI 973 (983)
Q Consensus 957 -~~lG~~~~Sv-~p~~i~~ 973 (983)
..+|++--.| +|..+.+
T Consensus 525 ~~~~GfdGkwViHP~qV~l 543 (731)
T 1p7t_A 525 QLRAGANTAWVPSPTAATL 543 (731)
T ss_dssp HHHTTCSEEEESSHHHHHH
T ss_pred HHhCCCCCcccCCHHHHHH
Confidence 5789985555 4555543
No 34
>3cuz_A MSA, malate synthase A; TIM barrel, cytoplasm, glyoxylate bypass, transferase, tricarboxylic acid cycle; 1.04A {Escherichia coli} PDB: 3cv1_A 3cv2_A*
Probab=97.34 E-value=0.002 Score=75.62 Aligned_cols=151 Identities=16% Similarity=0.124 Sum_probs=95.5
Q ss_pred cEEEeecCCCHHHHHHHHHHHHHHHHHHHHHcCCCC-CceEEEEEecHHHHHHHHHHHhh----CCEEEEcchhhhhhhh
Q 039683 813 PEIMVPLVGTPQELGHQISLIRNVATKVFSEMGSSL-DYKVGTMIEIPRAALVADEIAKE----AEFFSFGTNDLTQMTF 887 (983)
Q Consensus 813 l~ImiPmV~~~~E~~~~~~~~~~~~~~~~~~~g~~~-~~~vg~MIEtP~a~~~a~~ia~~----~Df~sIGtNDLtq~~l 887 (983)
..|++|++.+++|++.+.+.+..+. ...|++. .+++++||||+.+++++++|+.. +.|+.+|..|++-.+.
T Consensus 208 ~~i~LPK~es~~Ev~~~~~~f~~~E----~~lGlp~gtiki~vlIET~~a~~n~~eIa~al~~rv~gLn~G~~Dy~~s~i 283 (532)
T 3cuz_A 208 PYFYLPKTQSWQEAAWWSEVFSYAE----DRFNLPRGTIKATLLIETLPAVFQMDEILHALRDHIVGLNCGRWDYIFSYI 283 (532)
T ss_dssp CEEEECCCCCHHHHHHHHHHHHHHH----HHTTCCTTCSEEEEECCSHHHHTSHHHHHHHTTTTEEEEECCSHHHHHHHH
T ss_pred CeEEccCCCCHHHHHHHHHHHHHHH----HhcCCCCCceEEEEEeccHHHHHhHHHHHHhccCCceEEEcCHHHHHHHHH
Confidence 6899999999999999888775543 2457764 58999999999999999999864 7899999999998874
Q ss_pred cCcCCCccccchhhhccCCCCCCCcccCCHHHHHHHHHHHHHHhhhcCCCCeEEEcCCCC----CChHH-----------
Q 039683 888 GYSRDDVGKFLPVYLSKGILQSDPFEVLDQKGVGQLIKIATERGRAARPSLKVGICGEHG----GEPSS----------- 952 (983)
Q Consensus 888 a~dR~~~~~~~~~y~~~~i~~~~p~~~~d~~aV~~lI~~~~~~a~~~~~g~~v~iCGe~a----~~p~~----------- 952 (983)
...++...-+++.- .++-...||. .+..+++ +.+|++ .|+.. |=|-.+ .||+.
T Consensus 284 ~~~~~~~~~~lpdr--~~~~~~~~~l----~Ay~~ll---v~ac~a--~G~~a-IdGm~a~~p~kD~e~~~~~~~~l~~d 351 (532)
T 3cuz_A 284 KTLKNYPDRVLPDR--QAVTMDKPFL----NAYSRLL---IKTCHK--RGAFA-MGGMAAFIPSKDEEHNNQVLNKVKAD 351 (532)
T ss_dssp HHTTTCGGGCCCCG--GGCCTTSHHH----HHHHHHH---HHHHHH--TTCEE-EEEEECBCCCSSGGGCHHHHHHHHHH
T ss_pred hhcccCCCccCccc--cccccchHHH----HHHHHHH---HHHHHH--cCCCC-ccCccccCCCCChhHHHHHHHHHHHH
Confidence 44443321000100 0000012222 1222222 256776 47632 323111 24443
Q ss_pred HHHHHHcCCC-EEecCCCchHHHHHHhh
Q 039683 953 VAFFAEAGLD-YVSCSPFRVPIARLAAA 979 (983)
Q Consensus 953 ~~~l~~lG~~-~~Sv~p~~i~~~r~a~a 979 (983)
...=..+|++ ....+|..++.++.+=+
T Consensus 352 k~~~~~~GfdGkwviHP~qv~~~n~~F~ 379 (532)
T 3cuz_A 352 KSLEANNGHDGTWIAHPGLADTAMAVFN 379 (532)
T ss_dssp HHHHHHHTCSEEEESSGGGHHHHHHHHH
T ss_pred HHHHHHCCCCccccCCHHHHHHHHHHHh
Confidence 1222579998 66778999998876544
No 35
>4drs_A Pyruvate kinase; glycolysis, allosteric EN transferase; 2.50A {Cryptosporidium parvum} PDB: 3ma8_A*
Probab=94.29 E-value=0.09 Score=61.67 Aligned_cols=116 Identities=19% Similarity=0.105 Sum_probs=86.1
Q ss_pred cEEEeecCCCHHHHHHHHHHHHHHHHHHHHHcCC-----CCCceEEEEEecHHHHHHHHHHHhhCCEEEEcchhhhhhhh
Q 039683 813 PEIMVPLVGTPQELGHQISLIRNVATKVFSEMGS-----SLDYKVGTMIEIPRAALVADEIAKEAEFFSFGTNDLTQMTF 887 (983)
Q Consensus 813 l~ImiPmV~~~~E~~~~~~~~~~~~~~~~~~~g~-----~~~~~vg~MIEtP~a~~~a~~ia~~~Df~sIGtNDLtq~~l 887 (983)
-.|-+.||++++++..+++.+.+ .|. ...+++.+=||+|.|+.+.++|.+.+|++.|-=-||.--+
T Consensus 231 D~ialSFVr~~~Dv~~~r~~l~~--------~g~~~~~~~~~i~IiaKIE~~~av~NldeIi~~sDgIMVARGDLgvEi- 301 (526)
T 4drs_A 231 DFIALSFVQNGADVQLCRQIISE--------NTQYSNGIPSSIKIISKIENLEGVINFDSICSESDGIMVARGDLGMEI- 301 (526)
T ss_dssp SEEEETTCCSHHHHHHHHHHHHT--------CCTTTTTCCCCCEEEEEECSHHHHHTHHHHHHHSSEEEEECTTHHHHS-
T ss_pred CeeeecccCchhhHHHHHHHHHh--------hCcccccccccceeeeehhccHHHHHHHHHHhhccEEEEECCcccccC-
Confidence 37999999999999999877632 332 2258999999999999999999999999999988888532
Q ss_pred cCcCCCccccchhhhccCCCCCCCcccCCHHHHHHHHHHHHHHhhhcCCCCeEEEcCCCCC------Ch-----HHHHHH
Q 039683 888 GYSRDDVGKFLPVYLSKGILQSDPFEVLDQKGVGQLIKIATERGRAARPSLKVGICGEHGG------EP-----SSVAFF 956 (983)
Q Consensus 888 a~dR~~~~~~~~~y~~~~i~~~~p~~~~d~~aV~~lI~~~~~~a~~~~~g~~v~iCGe~a~------~p-----~~~~~l 956 (983)
|+. .|-.+=|++++.|++ .||||-+.-+|-. .| ..+.-.
T Consensus 302 -----------------------p~e-----~vp~~QK~II~~c~~--~gKPVI~ATQmLeSMi~np~PTRAEvsDVAnA 351 (526)
T 4drs_A 302 -----------------------PPE-----KIFVAQKCMISKCNV--AGKPVVTATQMLESMIKSNRPTRAEMTDVANA 351 (526)
T ss_dssp -----------------------CGG-----GHHHHHHHHHHHHHH--HTCCEEEESCTTGGGGSSSSCCHHHHHHHHHH
T ss_pred -----------------------CHH-----HHHHHHHHHHHHHHH--cCCeEEEhhhhhHHHhhCCCCCCchHHHHHHH
Confidence 222 333444566677876 4999999777642 22 234444
Q ss_pred HHcCCCEEecC
Q 039683 957 AEAGLDYVSCS 967 (983)
Q Consensus 957 ~~lG~~~~Sv~ 967 (983)
+--|.|.+..|
T Consensus 352 V~DGaDavMLS 362 (526)
T 4drs_A 352 VLDGSDCVMLS 362 (526)
T ss_dssp HHHTCSEEEES
T ss_pred HHhCCceEEEc
Confidence 55699988887
No 36
>3s9z_A Malate synthase G; inhibitor complex, structural genomics, mycobacterium tuberc structural proteomics project, XMTB; HET: I92; 1.79A {Mycobacterium tuberculosis} PDB: 3s9i_A* 3sad_A* 3saz_A* 3sb0_A* 1n8i_A 1n8w_A* 2gq3_A* 4ex4_A
Probab=73.50 E-value=6.3 Score=47.06 Aligned_cols=77 Identities=23% Similarity=0.239 Sum_probs=61.4
Q ss_pred cEEEeecCCCHHHHHHHHHHHHHHHHHHHHHcCCCC-CceEEEEEecHHHHHHHHHHHhh----CCEEEEcchhhhhhhh
Q 039683 813 PEIMVPLVGTPQELGHQISLIRNVATKVFSEMGSSL-DYKVGTMIEIPRAALVADEIAKE----AEFFSFGTNDLTQMTF 887 (983)
Q Consensus 813 l~ImiPmV~~~~E~~~~~~~~~~~~~~~~~~~g~~~-~~~vg~MIEtP~a~~~a~~ia~~----~Df~sIGtNDLtq~~l 887 (983)
+.|..|....++|++...+++..+.. .-|++. .+++|+|+|+-.+..+++++... +-|+--|-=|-|-...
T Consensus 393 iYivkPKmhgp~Evaf~~~lF~~vE~----~LgLp~~TiK~gVmdEerrts~nl~eci~alr~rvvfINtGfwDrtgseI 468 (741)
T 3s9z_A 393 IYIVKPKMHGPAEVAFTCELFSRVED----VLGLPQNTMKIGIMDEERRTTVNLKACIKAAADRVVFINTGFLDRTGDEI 468 (741)
T ss_dssp EEEEECCCCSHHHHHHHHHHHHHHHH----HHTCCTTCEEEEEEECSHHHHTTHHHHHHHTTTTEEEEEECHHHHHHHHH
T ss_pred eeEEecCCCChHHHHHHHHHHHHHHH----HhCCCCCcEEEEEEeccchhhhhHHHHHHHHHhheeecccChhhhhhhHH
Confidence 78999999999999998888766543 347776 58999999999999999999887 5667767668777665
Q ss_pred cCcCCC
Q 039683 888 GYSRDD 893 (983)
Q Consensus 888 a~dR~~ 893 (983)
-..+..
T Consensus 469 hT~mea 474 (741)
T 3s9z_A 469 HTSMEA 474 (741)
T ss_dssp HHTGGG
T ss_pred HHHhhc
Confidence 554443
No 37
>2hi6_A UPF0107 protein AF0055; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; NMR {Archaeoglobus fulgidus} SCOP: c.8.2.3
Probab=69.68 E-value=2.4 Score=41.17 Aligned_cols=54 Identities=19% Similarity=0.170 Sum_probs=38.9
Q ss_pred ceEEEccC-CccchHHHhhcccCceEEeccCccccccCCceEEeccEEeeCCCEEEEECCccEEEEcCC
Q 039683 553 AGILTARG-GMTSHAAVVARGWGKCCVSGCSDIRVNDNEKSIVVGDMVISEGDWLSLNGSTGEVILGKQ 620 (983)
Q Consensus 553 ~GiVt~~G-g~tSHaAIvAR~lgIP~VvGv~~~~~~~~~~~~~~~~~~l~~G~~VtlDg~~G~V~~g~~ 620 (983)
+|||..+- ....=.||+|. ||.|.+.....+ +.|++|++|.||+++|.|.....
T Consensus 80 aAiI~~~~e~Il~~Gaiva~---IP~vd~~~~d~~-----------~~i~~G~~v~vd~~~G~v~v~~~ 134 (141)
T 2hi6_A 80 KAIINKKTETIIAVGAAMAE---IPLVEVRDEKFF-----------EAVKTGDRVVVNADEGYVELIEL 134 (141)
T ss_dssp SEEEESSCCHHHHHHHHHHT---CCEEECCCTHHH-----------HHCCTTSEEEEETTTTEEEEEC-
T ss_pred eEEEecCcchhhhhhhheeC---CceEeccChhHH-----------HHhcCCCEEEEeCCCCEEEEeee
Confidence 66666553 33445677776 999988764322 46899999999999999987653
No 38
>3odm_A Pepcase, PEPC, phosphoenolpyruvate carboxylase; beta-barrel, lyase; 2.95A {Clostridium perfringens}
Probab=34.40 E-value=1.3e+02 Score=35.25 Aligned_cols=78 Identities=17% Similarity=0.204 Sum_probs=56.6
Q ss_pred HHHHHHHHHHcccc-CCccCcEEEeecCCCHHHHHHHHHHHHHHHHHHHHHcCCC---CCceEEEEEecHHHHHHHHHHH
Q 039683 794 VRAIFQAAVSMSNH-RFKVFPEIMVPLVGTPQELGHQISLIRNVATKVFSEMGSS---LDYKVGTMIEIPRAALVADEIA 869 (983)
Q Consensus 794 lrAi~rAa~~~~~~-g~~~~l~ImiPmV~~~~E~~~~~~~~~~~~~~~~~~~g~~---~~~~vg~MIEtP~a~~~a~~ia 869 (983)
+.+|.+|....... |..+--..++||.++++++..+..+++++..-...+.|.+ ..+.|..-+||-..+.++++|.
T Consensus 121 lesi~~a~d~a~~y~g~~aI~~yIISMT~sasDlL~V~~L~k~~aGL~~~e~g~~~~~~~i~VVPLFETieDL~~a~~Il 200 (560)
T 3odm_A 121 IMSIIETNVQSKELTGTPAISEVVVPMIETGKEISEFQDRVNSVVDMGNKNYKTKLDLNSVRIIPLVEDVPALANIDRIL 200 (560)
T ss_dssp HHHHHHHHHHHHHHHSSCSCCEEEESSCCSHHHHHHHHHHHHHHHHHHHHHCSSCCCTTSSEEEEEECCHHHHHTTHHHH
T ss_pred HHHHHHHHHHHHHhCCCcccCeEEecCCCCHHHHHHHHHHHHHHhcccccccCCCCCCCCCCeECCcCCHHHHHhhHHHH
Confidence 56777765443322 4444478999999999999999888866433222344553 2679999999999999999998
Q ss_pred hh
Q 039683 870 KE 871 (983)
Q Consensus 870 ~~ 871 (983)
+.
T Consensus 201 ~~ 202 (560)
T 3odm_A 201 DE 202 (560)
T ss_dssp HH
T ss_pred HH
Confidence 86
No 39
>4eys_A MCCC family protein; MCCF like, serine peptidase, csgid, structural genomics, NIA national institute of allergy and infectious diseases; HET: AMP; 1.58A {Streptococcus pneumoniae} PDB: 4e94_A*
Probab=32.15 E-value=2e+02 Score=31.66 Aligned_cols=78 Identities=10% Similarity=0.126 Sum_probs=51.9
Q ss_pred CCeEEEecCCCc----chHhh----------hhhhceEEEccCCccch----HHHhh---cccCceEEeccCccccccCC
Q 039683 532 KSAILVRTETSP----EDIGG----------MHAAAGILTARGGMTSH----AAVVA---RGWGKCCVSGCSDIRVNDNE 590 (983)
Q Consensus 532 ~~~ILV~~~~~P----~~~~~----------l~~a~GiVt~~Gg~tSH----aAIvA---R~lgIP~VvGv~~~~~~~~~ 590 (983)
+|.||+.++... ..+.. +++++|||.-+=...++ -.|+. +. +||+|.|+.--....+
T Consensus 245 ~g~ILfLEdv~E~p~~y~idRmL~qL~~aG~f~~~~GiilG~~~~~~~~~~~~~vl~~~l~~-~iPV~~~~~~GH~~p~- 322 (346)
T 4eys_A 245 EGKILLLETSEEKPKPEDFKKMLLTLKDTGIFAVINGLLVGKPMDETFHDDYKEALLDIIDS-NIPIVYNLNVGHATPR- 322 (346)
T ss_dssp TTCEEEEECCTTCCCHHHHHHHHHHHHTTTGGGTCSEEEEECCGGGTTHHHHHHHHHHHSCT-TSCEEEEESCSSSBSC-
T ss_pred CCcEEEEEcCCCCCCHHHHHHHHHHHHHcCCcccCCEEEEecCCCCCcchhHHHHHHHHHcC-CCcEEECCCCCCCCCc-
Confidence 689999998753 44443 24689999865322111 22222 34 9999999875543221
Q ss_pred ceEEeccEEeeCCCEEEEECCccEEEEc
Q 039683 591 KSIVVGDMVISEGDWLSLNGSTGEVILG 618 (983)
Q Consensus 591 ~~~~~~~~~l~~G~~VtlDg~~G~V~~g 618 (983)
..|.-|-.++||++.+.+...
T Consensus 323 -------~~lP~G~~a~ld~~~~~l~~~ 343 (346)
T 4eys_A 323 -------AIVPFGVHAHVDAQEQVILFD 343 (346)
T ss_dssp -------CCEESSSEEEEETTTTEEEEE
T ss_pred -------eeEEeCCEEEEEecCCEEEEE
Confidence 458899999999999988654
No 40
>1tqj_A Ribulose-phosphate 3-epimerase; beta-alpha barrel epimerase, isomerase; 1.60A {Synechocystis SP} SCOP: c.1.2.2
Probab=28.29 E-value=1.3e+02 Score=30.88 Aligned_cols=90 Identities=13% Similarity=0.135 Sum_probs=55.3
Q ss_pred CceEEEEE--ecHHHHHHHHHHHhhCCEEEEcchhhhhhhhcCcCCCccccchhhhccCCCCCCCcccCCHHHHHHHHHH
Q 039683 849 DYKVGTMI--EIPRAALVADEIAKEAEFFSFGTNDLTQMTFGYSRDDVGKFLPVYLSKGILQSDPFEVLDQKGVGQLIKI 926 (983)
Q Consensus 849 ~~~vg~MI--EtP~a~~~a~~ia~~~Df~sIGtNDLtq~~la~dR~~~~~~~~~y~~~~i~~~~p~~~~d~~aV~~lI~~ 926 (983)
+..+|+.+ .||.. ....++..+|++.++|-.-+. + .+.|. +...+.|++
T Consensus 112 g~~~gv~~~p~t~~e--~~~~~~~~~D~v~~msv~pg~---g--------------------gq~~~----~~~~~~i~~ 162 (230)
T 1tqj_A 112 GKKAGAVLNPSTPLD--FLEYVLPVCDLILIMSVNPGF---G--------------------GQSFI----PEVLPKIRA 162 (230)
T ss_dssp TCEEEEEECTTCCGG--GGTTTGGGCSEEEEESSCC---------------------------CCCC----GGGHHHHHH
T ss_pred CCcEEEEEeCCCcHH--HHHHHHhcCCEEEEEEecccc---C--------------------CccCc----HHHHHHHHH
Confidence 47899999 67633 346677789999888765441 1 01121 133344444
Q ss_pred HHHHhhhcCCCCeEEEcCCCCCChHHHHHHHHcCCCEEecCCC
Q 039683 927 ATERGRAARPSLKVGICGEHGGEPSSVAFFAEAGLDYVSCSPF 969 (983)
Q Consensus 927 ~~~~a~~~~~g~~v~iCGe~a~~p~~~~~l~~lG~~~~Sv~p~ 969 (983)
+.+...+.+.+.|+.+=|-. +++.++.+.+.|.|.+.+.+.
T Consensus 163 lr~~~~~~~~~~~I~v~GGI--~~~~~~~~~~aGad~vvvGSa 203 (230)
T 1tqj_A 163 LRQMCDERGLDPWIEVDGGL--KPNNTWQVLEAGANAIVAGSA 203 (230)
T ss_dssp HHHHHHHHTCCCEEEEESSC--CTTTTHHHHHHTCCEEEESHH
T ss_pred HHHHHHhcCCCCcEEEECCc--CHHHHHHHHHcCCCEEEECHH
Confidence 43333222246788884433 668899999999999988743
No 41
>1jqo_A Phosphoenolpyruvate carboxylase; beta barrel, carbon dioxide fixation, lyase; 3.00A {Zea mays} SCOP: c.1.12.3
Probab=26.84 E-value=2.7e+02 Score=34.99 Aligned_cols=119 Identities=14% Similarity=0.174 Sum_probs=76.1
Q ss_pred HHHHHHHHHHccccCCccCcEEEeecCCCHHHHHHHHHHHHHHHHHHHHHcCCCCCceEEEEEecHHHHHHHHHHHhh-C
Q 039683 794 VRAIFQAAVSMSNHRFKVFPEIMVPLVGTPQELGHQISLIRNVATKVFSEMGSSLDYKVGTMIEIPRAALVADEIAKE-A 872 (983)
Q Consensus 794 lrAi~rAa~~~~~~g~~~~l~ImiPmV~~~~E~~~~~~~~~~~~~~~~~~~g~~~~~~vg~MIEtP~a~~~a~~ia~~-~ 872 (983)
.-++++++.+++.+ ..-+.++||.++++++..+.-+. ++.|+...+.|..-+||...+.+++.|.+. .
T Consensus 514 vL~~f~~i~~~g~~---a~~~yIISmt~s~sDvL~V~~L~--------ke~Gl~~~l~VVPLFETi~DL~~a~~im~~ll 582 (970)
T 1jqo_A 514 VIGAFHVLAELPPD---SFGPYIISMATAPSDVLAVELLQ--------RECGVRQPLPVVPLFERLADLQSAPASVERLF 582 (970)
T ss_dssp HHHHHHHHHHSCST---TEEEEEETTCCSTHHHHHHHHHH--------HHTCCSSCCCEEEEECSHHHHHTHHHHHHHHH
T ss_pred HHHHHHHHHHhChh---hhCeEEeCCCCCHHHHHHHHHHH--------HHcCCCCCCCeeCCCCCHHHHHhHHHHHHHHH
Confidence 44667887776443 34689999999999999876543 345765568999999999999999999886 1
Q ss_pred C--EE--EEcchhhhhhhhcCcCCCccccchhhhccCCCCCCCcccCCHHHHHHHHHHHHHHhhhcCCCCeEEE
Q 039683 873 E--FF--SFGTNDLTQMTFGYSRDDVGKFLPVYLSKGILQSDPFEVLDQKGVGQLIKIATERGRAARPSLKVGI 942 (983)
Q Consensus 873 D--f~--sIGtNDLtq~~la~dR~~~~~~~~~y~~~~i~~~~p~~~~d~~aV~~lI~~~~~~a~~~~~g~~v~i 942 (983)
+ .+ .+ ++...-++|++=.|. .-|++..+- ++.++....++.|++ .|+++.+
T Consensus 583 ~~p~yr~~l--~~~QeVMLGYSDS~K--------D~G~laA~w-------~ly~Aq~~L~~v~~~--~gV~l~l 637 (970)
T 1jqo_A 583 SVDWYMDRI--KGKQQVMVGYSDSGK--------DAGRLSAAW-------QLYRAQEEMAQVAKR--YGVKLTL 637 (970)
T ss_dssp TCHHHHHHH--TSEEEEEEESTTHHH--------HSCHHHHHH-------HHHHHHHHHHHHHHT--TTCEEEE
T ss_pred hChHHHHhh--CCeEEEEEecccccc--------cccHHHHHH-------HHHHHHHHHHHHHHH--cCCcEEE
Confidence 1 00 00 122333334421111 012222221 566777777888876 5888876
No 42
>4hf7_A Putative acylhydrolase; PF13472 family, structural genomics, joint center for struct genomics, JCSG, protein structure initiative; HET: OSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=24.90 E-value=55 Score=32.58 Aligned_cols=26 Identities=19% Similarity=-0.017 Sum_probs=16.9
Q ss_pred HHHHHHHHHHHHhhhcCCCCeEEEcCCC
Q 039683 919 GVGQLIKIATERGRAARPSLKVGICGEH 946 (983)
Q Consensus 919 aV~~lI~~~~~~a~~~~~g~~v~iCGe~ 946 (983)
.+.+-++.+++.+++ ++.++.+|+-.
T Consensus 102 ~~~~~l~~ii~~~~~--~~~~iil~~~~ 127 (209)
T 4hf7_A 102 YTFGNIASMAELAKA--NKIKVILTSVL 127 (209)
T ss_dssp HHHHHHHHHHHHHHH--TTCEEEEECCC
T ss_pred HHHHHHHHhhHHHhc--cCceEEEEeee
Confidence 445556666666665 57888888743
No 43
>3sr3_A Microcin immunity protein MCCF; csgid, structural genomics, MCCF protein, center for structu genomics of infectious diseases, immune system; 1.50A {Bacillus anthracis} PDB: 3gjz_A 3t5m_A* 3u1b_A* 3tyx_A*
Probab=24.82 E-value=1.3e+02 Score=32.97 Aligned_cols=78 Identities=9% Similarity=0.134 Sum_probs=51.7
Q ss_pred CCeEEEecCCCc--chHhh----------hhhhceEEEccC--------CccchHHHhh---cccCceEEeccCcccccc
Q 039683 532 KSAILVRTETSP--EDIGG----------MHAAAGILTARG--------GMTSHAAVVA---RGWGKCCVSGCSDIRVND 588 (983)
Q Consensus 532 ~~~ILV~~~~~P--~~~~~----------l~~a~GiVt~~G--------g~tSHaAIvA---R~lgIP~VvGv~~~~~~~ 588 (983)
+|.||+.++... ..+.. +++++|||.-+= +.+ --.|+. ..++||++.|+.--....
T Consensus 231 ~g~ILfLEdv~e~py~idRmL~qL~~aG~~~~~~GiilG~f~~~~~~~~~~~-~~~vl~~~~~~~~iPV~~~~~~GH~~p 309 (336)
T 3sr3_A 231 EGDILFIEDSSKDAATIERSFSFLKINGVFDKVSGIILGKHEQFDDCGTNRK-PYEILLEVLQNQRIPLLADFDCCHTHP 309 (336)
T ss_dssp TTCEEEEECCSCBHHHHHHHHHHHHHTTGGGTCSEEEEECCTTCBCTTSCCC-HHHHHHHHHTTCCCCEEEEESSSSSBS
T ss_pred CCeEEEEEeCCCCHHHHHHHHHHHHHcCCcccCCEEEEccCcccccCCcccc-HHHHHHHHhhcCCCeEEECCCCCCCCC
Confidence 489999998654 33332 345899998651 112 222332 356999999987554322
Q ss_pred CCceEEeccEEeeCCCEEEEECCccEEEEc
Q 039683 589 NEKSIVVGDMVISEGDWLSLNGSTGEVILG 618 (983)
Q Consensus 589 ~~~~~~~~~~~l~~G~~VtlDg~~G~V~~g 618 (983)
+ ..|.-|-.++||++.+.+..-
T Consensus 310 ~--------~~lP~G~~a~ld~~~~~l~~~ 331 (336)
T 3sr3_A 310 M--------ITMPIGVQVKMDATNKTIHIL 331 (336)
T ss_dssp C--------CCEEESSEEEEETTTTEEEEC
T ss_pred c--------eeEEECCEEEEEecCCEEEEe
Confidence 1 457899999999999988654
No 44
>2wkj_A N-acetylneuraminate lyase; directed evolution, sialic acid mimetics, aldolase, S base, carbohydrate metabolism, N-acetylneuraminic acid LYAS; HET: KPI PYR; 1.45A {Escherichia coli} PDB: 2wnq_A 2xfw_A* 2wpb_A* 2wnz_A* 2ygy_A* 2wo5_A* 2wnn_A* 3lbm_A 3lbc_A 3lcf_A 3lcl_A 3lcg_A 3lch_A 3lci_A 1hl2_A 1fdy_A 1fdz_A 1nal_1 3lcx_A 3lcw_A
Probab=23.95 E-value=1.9e+02 Score=31.15 Aligned_cols=59 Identities=19% Similarity=0.366 Sum_probs=39.0
Q ss_pred ceEEEecCCCh------HhHHHHHHcCCCccccchhhhhhcccchhhHHHHHHhhcCCHHHHHHHHHhhchhHHHHHHHH
Q 039683 643 RLKVMANADTP------DDALTARNNGAQGIGLCRTEHMFFASDERIKAVRKMIMAVTPEQRKAALDLLLPYQRSDFEGI 716 (983)
Q Consensus 643 ~i~v~aNi~~p------~d~~~a~~~ga~GIGL~RTE~~f~~~~~~~p~v~~~~~~~~ee~~~~~l~~l~~~q~~~y~~i 716 (983)
++.|.+.++.. +-++.|.+.||||+=+.- =| +..+++++ .++.|+.|
T Consensus 80 rvpViaGvg~~~t~~ai~la~~A~~~Gadavlv~~-P~---------------y~~~s~~~-----------l~~~f~~v 132 (303)
T 2wkj_A 80 KIKLIAHVGCVSTAESQQLAASAKRYGFDAVSAVT-PF---------------YYPFSFEE-----------HCDHYRAI 132 (303)
T ss_dssp TSEEEEECCCSSHHHHHHHHHHHHHHTCSEEEEEC-CC---------------SSCCCHHH-----------HHHHHHHH
T ss_pred CCcEEEecCCCCHHHHHHHHHHHHhCCCCEEEecC-CC---------------CCCCCHHH-----------HHHHHHHH
Confidence 57788888762 233456788999985432 11 11235554 67889999
Q ss_pred HHHcCCCcEEEE
Q 039683 717 FRAMDGLPVTIR 728 (983)
Q Consensus 717 ~~a~~~~pVtiR 728 (983)
+++.++.||++=
T Consensus 133 a~a~~~lPiilY 144 (303)
T 2wkj_A 133 IDSADGLPMVVY 144 (303)
T ss_dssp HHHHTTCCEEEE
T ss_pred HHhCCCCCEEEE
Confidence 988766999875
No 45
>3p94_A GDSL-like lipase; serine hydrolase, catalytic triad, flavodo structural genomics, joint center for structural genomics; HET: MSE PG4; 1.93A {Parabacteroides distasonis}
Probab=22.79 E-value=92 Score=30.07 Aligned_cols=28 Identities=21% Similarity=0.160 Sum_probs=18.6
Q ss_pred HHHHHHHHHHHHHhhhcCCCCeEEEcCCCC
Q 039683 918 KGVGQLIKIATERGRAARPSLKVGICGEHG 947 (983)
Q Consensus 918 ~aV~~lI~~~~~~a~~~~~g~~v~iCGe~a 947 (983)
+.+.+-++.+++.+++ ++.++.+|+-..
T Consensus 97 ~~~~~~~~~~i~~~~~--~~~~vil~~~~p 124 (204)
T 3p94_A 97 ENVFGNLVSMAELAKA--NHIKVIFCSVLP 124 (204)
T ss_dssp HHHHHHHHHHHHHHHH--TTCEEEEECCCC
T ss_pred HHHHHHHHHHHHHHHh--CCCeEEEEeCCC
Confidence 3555666666666665 578888887543
No 46
>3k4i_A Uncharacterized protein; structural genomics, protein structure INI NEW YORK structural genomix research consortium, nysgxrc; 1.69A {Pseudomonas syringae PV}
Probab=22.17 E-value=1.9e+02 Score=30.39 Aligned_cols=88 Identities=14% Similarity=0.186 Sum_probs=55.5
Q ss_pred HHhcCCCeEEEecCCCcchHhh----h------hhhceEEEccCCccchHHHhhcccCceEEeccCccc-------cccC
Q 039683 527 WHAQGKSAILVRTETSPEDIGG----M------HAAAGILTARGGMTSHAAVVARGWGKCCVSGCSDIR-------VNDN 589 (983)
Q Consensus 527 ~~~~~~~~ILV~~~~~P~~~~~----l------~~a~GiVt~~Gg~tSHaAIvAR~lgIP~VvGv~~~~-------~~~~ 589 (983)
+...++|.|||.+......... | ..++|+|+.-+-.-... | +++++|+-..-.... .-..
T Consensus 78 id~~~~GdVlVvd~~g~~~~A~~G~lla~~a~~~G~aGvVidG~vRD~~e-i--~~~~fPV~a~g~~p~~~~~~~~~g~~ 154 (244)
T 3k4i_A 78 IDQVPSGSVIVSSNSGRHDCTVWGDIMTHFALANGIKGTVIDGVARDIDT-V--INCNYPLFSRGRFMQSAKNRTQLKAV 154 (244)
T ss_dssp GGGCCTTEEEEEECTTCSSSBSCCHHHHHHHHHHTCCEEEEESBBSCHHH-H--HHTTCCEEESCBCCCCSTTTEEEEEE
T ss_pred HHcCCCCeEEEEECCCCCCeEehHHHHHHHHHHCCCeEEEeCCccCCHHH-H--HhCCCCEEEeecCCCCCCCcccccee
Confidence 3446788999997554322221 1 23689999876655543 3 457777665322211 0112
Q ss_pred CceEEeccEEeeCCCEEEEECCccEEEEc
Q 039683 590 EKSIVVGDMVISEGDWLSLNGSTGEVILG 618 (983)
Q Consensus 590 ~~~~~~~~~~l~~G~~VtlDg~~G~V~~g 618 (983)
.-.+.+++..+.+||+|.=| .+|.|.+-
T Consensus 155 nvPV~igGv~V~PGD~V~aD-~dGVVviP 182 (244)
T 3k4i_A 155 QVPLVIDGITIQPGDLMVCD-GSGCVVVP 182 (244)
T ss_dssp SSCEEETTEEECTTCEEEEE-TTEEEEEC
T ss_pred cccEEECCEEECCCCEEEEc-CCeEEEEc
Confidence 24578899999999999999 57888753
No 47
>3tla_A MCCF; serine protease, hydrolase; 1.20A {Escherichia coli} PDB: 3tle_A* 3tlg_A 3tlb_A* 3tlc_A* 3tlz_A* 3tly_A
Probab=20.95 E-value=1.4e+02 Score=33.39 Aligned_cols=103 Identities=13% Similarity=0.212 Sum_probs=62.9
Q ss_pred CCCcEEEEEEcC-hhHHHH-----HHhcC-CCeEEEecCCC--cchHhh----------hhhhceEEEcc-------CCc
Q 039683 509 SPGAAVGQVVFS-AEDAEA-----WHAQG-KSAILVRTETS--PEDIGG----------MHAAAGILTAR-------GGM 562 (983)
Q Consensus 509 s~G~a~G~v~~~-~~~~~~-----~~~~~-~~~ILV~~~~~--P~~~~~----------l~~a~GiVt~~-------Gg~ 562 (983)
.+|.++|+++-- .+-... +.... +|.||+.++.. |..+.. +++++|||.-+ +..
T Consensus 233 ~~g~~~G~LiGGNL~~l~~l~GTpy~p~~~~g~ILfLEdv~E~py~idRmL~qL~~aG~f~~~~GIilG~f~~~~~~~~~ 312 (371)
T 3tla_A 233 GSGKVEGRVIGGNLNTLTGIWGSEWMPEIRNGDILFIEDSRKSIATVERLFSMLKLNRVFDKVSAIILGKHELFDCAGSK 312 (371)
T ss_dssp SCSEEEEEEEEEEHHHHTTTTTSTTSCCCCTTCEEEEECBSCBHHHHHHHHHHHHHTTGGGTCSEEEEECCBTCBCTTSC
T ss_pred cCceEEEEEEEeeHHHHHHHhCCcCCCCCCCCeEEEEEeCCCCHHHHHHHHHHHHHcCCcccCCEEEEcCCccccCCCcc
Confidence 467888887611 111100 11122 58999999864 444433 34689999866 111
Q ss_pred cchHHHhh---cccCceEEeccCccccccCCceEEeccEEeeCCCEEEEECCccEEEEcC
Q 039683 563 TSHAAVVA---RGWGKCCVSGCSDIRVNDNEKSIVVGDMVISEGDWLSLNGSTGEVILGK 619 (983)
Q Consensus 563 tSHaAIvA---R~lgIP~VvGv~~~~~~~~~~~~~~~~~~l~~G~~VtlDg~~G~V~~g~ 619 (983)
.+-..|+. ..++||++.|+.--.... ...|.-|-.++||++.+.+..-.
T Consensus 313 ~~~~~vl~~~~~~~~iPVv~~~~~GH~~p--------~~tlP~G~~a~ld~~~~~l~l~e 364 (371)
T 3tla_A 313 RRPYEVLTEVLDGKQIPVLDGFDCSHTHP--------MLTLPLGVKLAIDFDNKNISITE 364 (371)
T ss_dssp CCHHHHHHHHHTTCCCCEEEEESCSSSBS--------CCCEEESSEEEEETTTTEEEECS
T ss_pred ccHHHHHHHHHhhCCCcEEECCCCCCCCC--------ceEEEECCEEEEEecCCEEEEec
Confidence 22333443 346999999987544222 14578999999999999987653
No 48
>2ash_A Queuine tRNA-ribosyltransferase; TM1561, tRNA-guanine, struc genomics, joint center for structural genomics, JCSG; 1.90A {Thermotoga maritima}
Probab=20.61 E-value=9.1e+02 Score=26.89 Aligned_cols=115 Identities=11% Similarity=0.059 Sum_probs=67.0
Q ss_pred eecCCCHHHHHHHHHHHHHHHHHHHHHcCCCCCceEEEEEec---HH-HHHHHHHHHhh-CCEEEEcchhhhhhhhcCcC
Q 039683 817 VPLVGTPQELGHQISLIRNVATKVFSEMGSSLDYKVGTMIEI---PR-AALVADEIAKE-AEFFSFGTNDLTQMTFGYSR 891 (983)
Q Consensus 817 iPmV~~~~E~~~~~~~~~~~~~~~~~~~g~~~~~~vg~MIEt---P~-a~~~a~~ia~~-~Df~sIGtNDLtq~~la~dR 891 (983)
.|.-.+.+++++..+.....+++.......+....+|+ |.- +. -...++++.+. +|++.||- | ++
T Consensus 157 ~~~~~~~~~~~~sv~rT~rWa~r~~~~~~~~~~~lfgi-VQGg~~~dLR~~sa~~l~~~~~~GyaIGG--l-----sv-- 226 (381)
T 2ash_A 157 PVPDADYEEVKEATERTYRWALRSKKAFKTENQALFGI-VQGGIYPDLRRESALQLTSIGFDGYAIGG--L-----SI-- 226 (381)
T ss_dssp CC--CCHHHHHHHHHHHHHHHHHHHHHCCCSSCEEEEE-ECCTTCHHHHHHHHHHHHTTCCSEEEECS--C-----SS--
T ss_pred CCCCCCHHHHHHHHHHHHHHHHHHHHHhhCCCCcEEEE-EcCCCCHHHHHHHHHHHHhcCCceEEecC--c-----cc--
Confidence 34456777777777666555554433222111223443 331 11 12456777766 99999994 1 11
Q ss_pred CCccccchhhhccCCCCCCCcccCCHHHHHHHHHHHHHHhhhcCCCCeEEEcCCCCCChHHHHHHHHcCCCEEecCC
Q 039683 892 DDVGKFLPVYLSKGILQSDPFEVLDQKGVGQLIKIATERGRAARPSLKVGICGEHGGEPSSVAFFAEAGLDYVSCSP 968 (983)
Q Consensus 892 ~~~~~~~~~y~~~~i~~~~p~~~~d~~aV~~lI~~~~~~a~~~~~g~~v~iCGe~a~~p~~~~~l~~lG~~~~Sv~p 968 (983)
+.|- +.+.+++..+...- -.+||..+-|- +.|+.+..++.+|+|.|-|.-
T Consensus 227 -----------------Ge~~-----~~~~~~l~~~~~~L---P~~kPRyLmGv--G~P~~il~~V~~GvDmFDcv~ 276 (381)
T 2ash_A 227 -----------------GEER-----SLTLEMTEVTVEFL---PEDKPRYFMGG--GSPELILELVDRGVDMFDSVF 276 (381)
T ss_dssp -----------------SSCH-----HHHHHHHHHHHTTS---CTTSCEEECSC--CCHHHHHHHHTTTCCEEEESH
T ss_pred -----------------CCCH-----HHHHHHHHHHHhhC---CCCCcEEEcCC--CCHHHHHHHHHcCCCEEeCCh
Confidence 2231 35556665543332 24789999663 799999999999999997653
No 49
>2ftp_A Hydroxymethylglutaryl-COA lyase; structural genomics, PSI, protein structure initiativ midwest center for structural genomics, MCSG; 2.40A {Pseudomonas aeruginosa}
Probab=20.31 E-value=7.8e+02 Score=26.03 Aligned_cols=48 Identities=25% Similarity=0.203 Sum_probs=33.7
Q ss_pred HHHHHHHHHHHHHhhhcCCCCeEEE-----cC-CC--CCChHHHHHHH----HcCCCEEecC
Q 039683 918 KGVGQLIKIATERGRAARPSLKVGI-----CG-EH--GGEPSSVAFFA----EAGLDYVSCS 967 (983)
Q Consensus 918 ~aV~~lI~~~~~~a~~~~~g~~v~i-----CG-e~--a~~p~~~~~l~----~lG~~~~Sv~ 967 (983)
+..++.++.+++.+++ .|+.|.. .| |. -.+|+.+..++ +.|++.|++.
T Consensus 120 ee~l~~~~~~v~~a~~--~G~~V~~~l~~~~~~e~~~~~~~~~~~~~~~~~~~~G~d~i~l~ 179 (302)
T 2ftp_A 120 KDSLERFVPVLEAARQ--HQVRVRGYISCVLGCPYDGDVDPRQVAWVARELQQMGCYEVSLG 179 (302)
T ss_dssp HHHHHHHHHHHHHHHH--TTCEEEEEEECTTCBTTTBCCCHHHHHHHHHHHHHTTCSEEEEE
T ss_pred HHHHHHHHHHHHHHHH--CCCeEEEEEEEEeeCCcCCCCCHHHHHHHHHHHHHcCCCEEEEe
Confidence 4677888888888887 5887741 11 21 24777766665 7999999876
No 50
>3r2g_A Inosine 5'-monophosphate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.94A {Legionella pneumophila subsp}
Probab=20.24 E-value=1.2e+02 Score=33.90 Aligned_cols=53 Identities=17% Similarity=0.107 Sum_probs=35.9
Q ss_pred CEEEEECCccEEEEcCCCCCCCCccchHHHHHHHhhhh-hceEEEe-cCCChHhHHHHHHcCCCcccc
Q 039683 604 DWLSLNGSTGEVILGKQPLAPPAMSGDLEIFMSWADEI-RRLKVMA-NADTPDDALTARNNGAQGIGL 669 (983)
Q Consensus 604 ~~VtlDg~~G~V~~g~~~~~~~~~~~~~~~~~~~~~~~-~~i~v~a-Ni~~p~d~~~a~~~ga~GIGL 669 (983)
|.|+||...|. .........|.++. ..+.|.+ |+.+++++..+.+.|+|+|-+
T Consensus 114 dvI~id~a~G~-------------~~~~~e~I~~ir~~~~~~~Vi~G~V~T~e~A~~a~~aGaD~I~V 168 (361)
T 3r2g_A 114 DFFCVDVAHAH-------------AKYVGKTLKSLRQLLGSRCIMAGNVATYAGADYLASCGADIIKA 168 (361)
T ss_dssp CEEEEECSCCS-------------SHHHHHHHHHHHHHHTTCEEEEEEECSHHHHHHHHHTTCSEEEE
T ss_pred CEEEEeCCCCC-------------cHhHHHHHHHHHHhcCCCeEEEcCcCCHHHHHHHHHcCCCEEEE
Confidence 58888877661 11112223333332 2577777 999999999999999999864
No 51
>2bdq_A Copper homeostasis protein CUTC; alpha beta protein, structural genomics, PSI, protein structure initiative; 2.30A {Streptococcus agalactiae}
Probab=20.21 E-value=1.1e+02 Score=31.79 Aligned_cols=67 Identities=22% Similarity=0.384 Sum_probs=40.9
Q ss_pred HhHHHHHHcCCCccccchhhhhhcccchhhHHHHHHhhcCCHHHHHHHHHhhchhHHHHHHHHHHHcCCCcEEE-EecCC
Q 039683 654 DDALTARNNGAQGIGLCRTEHMFFASDERIKAVRKMIMAVTPEQRKAALDLLLPYQRSDFEGIFRAMDGLPVTI-RLLDP 732 (983)
Q Consensus 654 ~d~~~a~~~ga~GIGL~RTE~~f~~~~~~~p~v~~~~~~~~ee~~~~~l~~l~~~q~~~y~~i~~a~~~~pVti-R~lD~ 732 (983)
+|+..+++.|++||= |=+++.+..+ +. +..++++++..|.|||+ |-+|.
T Consensus 80 ~Di~~~~~~GadGvV-----~G~Lt~dg~i----------D~---------------~~~~~Li~~a~~~~vTFHRAFD~ 129 (224)
T 2bdq_A 80 EDILRAVELESDALV-----LGILTSNNHI----------DT---------------EAIEQLLPATQGLPLVFHMAFDV 129 (224)
T ss_dssp HHHHHHHHTTCSEEE-----ECCBCTTSSB----------CH---------------HHHHHHHHHHTTCCEEECGGGGG
T ss_pred HHHHHHHHcCCCEEE-----EeeECCCCCc----------CH---------------HHHHHHHHHhCCCeEEEECchhc
Confidence 678889999999973 2233333222 22 23445677778999999 99996
Q ss_pred CCCCCCCCCchHHHHHHHHHHcCC
Q 039683 733 PLHEFLPEGDLEQIVNELTLETGM 756 (983)
Q Consensus 733 ~~~eflp~~~~~~~~~~~~~~~G~ 756 (983)
- |..|..+-++.|.++ |+
T Consensus 130 ~-----~~~d~~~ale~L~~l-Gv 147 (224)
T 2bdq_A 130 I-----PKSDQKKSIDQLVAL-GF 147 (224)
T ss_dssp S-----CTTTHHHHHHHHHHT-TC
T ss_pred c-----CCcCHHHHHHHHHHc-CC
Confidence 3 222344555555544 54
Done!