Citrus Sinensis ID: 039683

Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-------660-------670-------680-------690-------700-------710-------720-------730-------740-------750-------760-------770-------780-------790-------800-------810-------820-------830-------840-------850-------860-------870-------880-------890-------900-------910-------920-------930-------940-------950-------960-------970-------980---
MKGTVIRSTPDVCSSSSTRRLYTLKAKYADDADLLSLRENHSLCLLRLSRSCRGTRCEHAGNKCFLETKAGAGRYDQPQPATAAVPALRGRMKPKAILTPVSDATSPTTEKRVFTFGKGRSEGNKGMKSLLGGKGANLAEMSTIGLSVPPGLTISTEACQEYQQNGKKLSEGLWEEVLEGLETVEKEMGALLGDPSKPLLLSVRSGAAISMPGMMDTVLNLGLNDEVAAGLAEKCGGRFAYDSYRRFLDMFGDVVMGIPHSLFEEKLEHMKEAKGVKLDTDLSASDLKELVKQYKNVYIETKGEEFPSDPKKQLQLSVKAVFDSWDSPRAIKYRSINQITGLKGTAVNIQCMVFGNMGNTSGTGVLFTRNPSTGENKLYGEFLINAQGEDVVAGIRTPEDLNTMKSYMPEAYKELVENCEILERHYKDMMDIEFTVQENRLWMLQCRSGKRTGKAAVKIAVDMVNEGLVDTRAAVKMVEPQHLDQLLHPQFEDPSAYKDKVVATGLPASPGAAVGQVVFSAEDAEAWHAQGKSAILVRTETSPEDIGGMHAAAGILTARGGMTSHAAVVARGWGKCCVSGCSDIRVNDNEKSIVVGDMVISEGDWLSLNGSTGEVILGKQPLAPPAMSGDLEIFMSWADEIRRLKVMANADTPDDALTARNNGAQGIGLCRTEHMFFASDERIKAVRKMIMAVTPEQRKAALDLLLPYQRSDFEGIFRAMDGLPVTIRLLDPPLHEFLPEGDLEQIVNELTLETGMSEDEVFSRIEKLSEVNPMLGFRGCRLGISYPELTEMQVRAIFQAAVSMSNHRFKVFPEIMVPLVGTPQELGHQISLIRNVATKVFSEMGSSLDYKVGTMIEIPRAALVADEIAKEAEFFSFGTNDLTQMTFGYSRDDVGKFLPVYLSKGILQSDPFEVLDQKGVGQLIKIATERGRAARPSLKVGICGEHGGEPSSVAFFAEAGLDYVSCSPFRVPIARLAAAQVAV
ccccEEccccccccccccHHHHHHHccccccHHHHccccccHHHHHccccccccccccccccccHHcccccccccccccccccccccccccccccccccccccccccccccEEEEccccccccccHHHHHHccHHHHHHHHHHccccccccEEEcHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHcccccccccccCEEEEcccccccccccccHHcccccHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHccccccccccHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHccccHHHHHHHHHcccccccccEEEEEcccccccccccccEEEEccccccccccEEEEEEcccccccccccccccccHHHHHHHcHHHHHHHHHHHHHHHHHcccccEEEEEEEccEEEEEEEccccccHHHHHHHHHHHHHcccccHHHHHHccccccHHHHccccccccccccccccccccccccccEEEEEEEcHHHHHHHHHccccEEEEEcccccccHHHHHHHHEEEccccccccHHHHHHHHccccEEEccccCEEEccccEEEEccEEEEcccEEEEEccccEEEEcccccccccccccHHHHHHHHHHHHHHccccccccHHHHHHHHHcccccccccccccccccccHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHccccEEEEccccccccccccccHHHHHHHHHHHccccHHHHHHHHHHHHcccccccccccccccccHHHHHHHHHHHHHHHHHHHHcccccccEEEccccccHHHHHHHHHHHHHHHHHHHHHccccccCEcccEECcHHHHHcHHHHHHHccEEEEcHHHHHHHHcccccccHHcHHHHHHHccccccccccccccHHHHHHHHHHHHHHHHccccccEEEcccccccHHHHHHHHHccccEEEcccccHHHHHHHHHcccc
*******STPDVCSSSSTRRLYTLKAKYADDADLLSLRENHSL*LLRLSR**************************************************************VFTFGKGRSEGNKGMKSLLGGKGANLAEMSTIGLSVPPGLTISTEACQEYQQNGKKLSEGLWEEVLEGLETVEKEMGALLGDPSKPLLLSVRSGAAISMPGMMDTVLNLGLNDEVAAGLAEKCGGRFAYDSYRRFLDMFGDVVMGIPHSLFEEKLEHMKEAKGVKLDTDLSASDLKELVKQYKNVYIETKGEEFPSDPKKQLQLSVKAVFDSWDSPRAIKYRSINQITGLKGTAVNIQCMVFGNMGNTSGTGVLFTRNPSTGENKLYGEFLINAQGEDVVAGIRTPEDLNTMKSYMPEAYKELVENCEILERHYKDMMDIEFTVQENRLWMLQCRSGKRTGKAAVKIAVDMVNEGLVDTRAAVKMVEPQHLDQLLHPQFEDPSAYKDKVVATGLPASPGAAVGQVVFSAEDAEAWHAQGKSAILVRTETSPEDIGGMHAAAGILTARGGMTSHAAVVARGWGKCCVSGCSDIRVNDNEKSIVVGDMVISEGDWLSLNGSTGEVILGKQPLAPPAMSGDLEIFMSWADEIRRLKVMANADTPDDALTARNNGAQGIGLCRTEHMFFASDERIKAVRKMIMAVTPEQRKAALDLLLPYQRSDFEGIFRAMDGLPVTIRLLDPPLHEFLPEGDLEQIVNELTLETGMSEDEVFSRIEKLSEVNPMLGFRGCRLGISYPELTEMQVRAIFQAAVSMSNHRFKVFPEIMVPLVGTPQELGHQISLIRNVATKVFSEMGSSLDYKVGTMIEIPRAALVADEIAKEAEFFSFGTNDLTQMTFGYSRDDVGKFLPVYLSKGILQSDPFEVLDQKGVGQLIKIATERGRAARPSLKVGICGEHGGEPSSVAFFAEAGLDYVSCSPFRVPIARLAAAQVAV
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MKGTVIRSTPDVCSSSSTRRLYTLKAKYADDADLLSLRENHSLCLLRLSRSCRGTRCEHAGNKCFLETKAGAGRYDQPQPATAAVPALRGRMKPKAILTPVSDATSPTTEKRVFTFGKGRSEGNKGMKSLLGGKGANLAEMSTIGLSVPPGLTISTEACQEYQQNGKKLSEGLWEEVLEGLETVEKEMGALLGDPSKPLLLSVRSGAAISMPGMMDTVLNLGLNDEVAAGLAEKCGGRFAYDSYRRFLDMFGDVVMGIPHSLFEEKLEHMKEAKGVKLDTDLSASDLKELVKQYKNVYIETKGEEFPSDPKKQLQLSVKAVFDSWDSPRAIKYRSINQITGLKGTAVNIQCMVFGNMGNTSGTGVLFTRNPSTGENKLYGEFLINAQGEDVVAGIRTPEDLNTMKSYMPEAYKELVENCEILERHYKDMMDIEFTVQENRLWMLQCRSGKRTGKAAVKIAVDMVNEGLVDTRAAVKMVEPQHLDQLLHPQFEDPSAYKDKVVATGLPASPGAAVGQVVFSAEDAEAWHAQGKSAILVRTETSPEDIGGMHAAAGILTARGGMTSHAAVVARGWGKCCVSGCSDIRVNDNEKSIVVGDMVISEGDWLSLNGSTGEVILGKQPLAPPAMSGDLEIFMSWADEIRRLKVMANADTPDDALTARNNGAQGIGLCRTEHMFFASDERIKAVRKMIMAVTPEQRKAALDLLLPYQRSDFEGIFRAMDGLPVTIRLLDPPLHEFLPEGDLEQIVNELTLETGMSEDEVFSRIEKLSEVNPMLGFRGCRLGISYPELTEMQVRAIFQAAVSMSNHRFKVFPEIMVPLVGTPQELGHQISLIRNVATKVFSEMGSSLDYKVGTMIEIPRAALVADEIAKEAEFFSFGTNDLTQMTFGYSRDDVGKFLPVYLSKGILQSDPFEVLDQKGVGQLIKIATERGRAARPSLKVGICGEHGGEPSSVAFFAEAGLDYVSCSPFRVPIARLAAAQVAV

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

Annotation ?Function Description ?Confidence Level ?Reference Protein ?
Pyruvate, phosphate dikinase 1, chloroplastic Formation of phosphoenolpyruvate. The cytoplasmic isoform supports the biosynthetic processes in the nascent endosperm and provides an efficient mechanism for glycolytic ATP synthesis in oxygen depleted tissues. May be involved in regulating the flux of carbon into starch and fatty acids of seeds and in the remobilization of nitrogen reserves in senescing leaves.confidentQ6AVA8
Pyruvate, phosphate dikinase 1, chloroplastic Formation of phosphoenolpyruvate. May be involved in regulating the flux of carbon into starch and fatty acids of seeds and in the remobilization of nitrogen reserves in senescing leaves.confidentO23404
Pyruvate, phosphate dikinase, chloroplastic Formation of phosphoenolpyruvate, which is the primary acceptor of CO(2) in C4 and some Crassulacean acid metabolism plants.probableQ39735

Prediction of Enzyme Commission Number ?

EC Number ?Description ?Confidence Level ?
2.-.-.-Transferases.probable
2.7.-.-Transferring phosphorous-containing groups.probable
2.7.9.-Phosphotransferases with paired acceptors.probable
2.7.9.1Pyruvate, phosphate dikinase.probable

Spatial Structural Prediction

Structural Models Based on Templates

Template: 1VBG, chain A
Confidence level:very confident
Coverage over the Query: 110-983
View the alignment between query and template
View the model in PyMOL