Query 039685
Match_columns 111
No_of_seqs 18 out of 20
Neff 2.2
Searched_HMMs 13730
Date Mon Mar 25 21:09:25 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/039685.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/039685hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1oz7a_ d.169.1.1 (A:) Snake c 49.5 1.8 0.00013 25.8 0.2 28 13-40 97-130 (131)
2 d1fxza1 b.82.1.2 (A:10-248) Se 29.7 12 0.00084 27.0 1.9 18 79-96 191-208 (239)
3 d1nxza1 b.122.1.2 (A:2-73) Hyp 26.9 9.1 0.00066 21.9 0.7 35 31-65 3-48 (72)
4 d1od5a1 b.82.1.2 (A:7-251) See 25.6 15 0.0011 26.4 1.9 20 78-97 196-215 (245)
5 d1s1da_ b.67.3.1 (A:) Soluble 23.8 5.5 0.0004 30.8 -0.9 14 59-72 76-89 (317)
6 d1efvb_ c.26.2.3 (B:) Small, b 23.6 9.7 0.00071 26.9 0.5 22 78-99 32-53 (252)
7 d1sb2b1 d.169.1.1 (B:2-128) Sn 22.7 8.2 0.0006 22.7 -0.1 33 8-40 89-127 (127)
8 d1e87a_ d.169.1.1 (A:) CD69 {H 21.3 9.9 0.00072 22.1 0.1 11 29-39 106-116 (117)
9 d3clsc1 c.26.2.3 (C:1-262) Sma 19.7 11 0.00081 26.9 0.1 19 80-98 34-52 (262)
10 d2hf5a1 a.39.1.5 (A:81-113) Tr 19.7 17 0.0012 19.2 0.8 11 87-97 3-13 (33)
No 1
>d1oz7a_ d.169.1.1 (A:) Snake coagglutinin alpha chain {Saw-scaled viper (Echis carinatus), echicetin [TaxId: 40353]}
Probab=49.47 E-value=1.8 Score=25.77 Aligned_cols=28 Identities=18% Similarity=0.284 Sum_probs=18.1
Q ss_pred cccchhhhhhhhhcc------cccccccccccCc
Q 039685 13 RELTGAVDLISHYKL------LPHHDFFCKRSLP 40 (111)
Q Consensus 13 rEltgavDLis~ykL------~~h~effCKr~lp 40 (111)
.+-+++++--+.+.. -..+.|.|++|+|
T Consensus 97 ~~~C~~~~~~~~~~~W~~~~C~~~~~fICe~~~p 130 (131)
T d1oz7a_ 97 YSECFVLEKQSVFRTWVATPCENTFPFMCKYPVP 130 (131)
T ss_dssp CCCEEEEEGGGTTCSEEEECTTSCEEEEEEECTT
T ss_pred CCCEEEEEecCCCCcEEecCCCCCEeEEEeEeCC
Confidence 344666665554432 3456799999998
No 2
>d1fxza1 b.82.1.2 (A:10-248) Seed storage 7S protein {Soybean (Glycine max), proglycinin [TaxId: 3847]}
Probab=29.69 E-value=12 Score=26.99 Aligned_cols=18 Identities=28% Similarity=0.552 Sum_probs=16.0
Q ss_pred CccccccHHHHHHhhccc
Q 039685 79 ARIQPFDLDVLREAFQLR 96 (111)
Q Consensus 79 ~~iqpFdl~vL~~aFqL~ 96 (111)
..+.=||.++|.+||...
T Consensus 191 ni~~gFs~~~La~Afnv~ 208 (239)
T d1fxza1 191 SILSGFTLEFLEHAFSVD 208 (239)
T ss_dssp CGGGGSCHHHHHHHHTCC
T ss_pred CcccccCHHHHHHHHCcC
Confidence 578999999999999775
No 3
>d1nxza1 b.122.1.2 (A:2-73) Hypothetical protein HI0303 {Haemophilus influenzae [TaxId: 727]}
Probab=26.93 E-value=9.1 Score=21.90 Aligned_cols=35 Identities=20% Similarity=0.201 Sum_probs=23.2
Q ss_pred ccccccccCcc------ccccccccccC----CCC-eeeecCCCcc
Q 039685 31 HDFFCKRSLPL------SISDTHYLHNV----VGD-TEIRKGEGMQ 65 (111)
Q Consensus 31 ~effCKr~lp~------sisdthYL~nV----vGD-teirkgeGme 65 (111)
.-|||+.+++. +=.++|||.|| +|| -++-.|+|.+
T Consensus 3 pR~f~~~~l~~~~~i~L~~~~~hHl~~VLR~k~Gd~v~l~dg~g~~ 48 (72)
T d1nxza1 3 PRIYHPISLENQTQCYLSEDAANHVARVLRMTEGEQLELFDGSNHI 48 (72)
T ss_dssp CEEECSSCCTTCSEEECCHHHHHHHHTTSCCCTTCEEEEECSSSEE
T ss_pred ccEEcCcccCCCCEEEcCHHHHHHHHheeCCCCCCEEEEEeCCCCE
Confidence 34778776652 33478999998 677 3566677654
No 4
>d1od5a1 b.82.1.2 (A:7-251) Seed storage 7S protein {Soybean (Glycine max), glycinin A3B4 [TaxId: 3847]}
Probab=25.58 E-value=15 Score=26.42 Aligned_cols=20 Identities=20% Similarity=0.390 Sum_probs=17.0
Q ss_pred CCccccccHHHHHHhhcccc
Q 039685 78 SARIQPFDLDVLREAFQLRE 97 (111)
Q Consensus 78 ~~~iqpFdl~vL~~aFqL~e 97 (111)
...+.-||.++|.+||.+..
T Consensus 196 ~nif~gF~~~~La~Af~v~~ 215 (245)
T d1od5a1 196 GSVLSGFSKHFLAQSFNTNE 215 (245)
T ss_dssp CCTTTTSCHHHHHHHTTCCH
T ss_pred CCeeecCCHHHHHHHHCCCH
Confidence 36799999999999998754
No 5
>d1s1da_ b.67.3.1 (A:) Soluble calcium-activated nucleotidase SCAN-1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=23.78 E-value=5.5 Score=30.83 Aligned_cols=14 Identities=50% Similarity=0.762 Sum_probs=11.8
Q ss_pred ecCCCcchhHHhhc
Q 039685 59 RKGEGMQLDQLIQN 72 (111)
Q Consensus 59 rkgeGmeLdQLiq~ 72 (111)
-+|+||||.+|+.=
T Consensus 76 ~~GRGmELSELv~F 89 (317)
T d1s1da_ 76 EKGRGMELSDLIVF 89 (317)
T ss_dssp BTTBCCCEEEEEEE
T ss_pred CCccccccchheEE
Confidence 37999999999863
No 6
>d1efvb_ c.26.2.3 (B:) Small, beta subunit of electron transfer flavoprotein ETFP {Human (Homo sapiens) [TaxId: 9606]}
Probab=23.57 E-value=9.7 Score=26.92 Aligned_cols=22 Identities=27% Similarity=0.418 Sum_probs=18.9
Q ss_pred CCccccccHHHHHHhhccccCC
Q 039685 78 SARIQPFDLDVLREAFQLRETS 99 (111)
Q Consensus 78 ~~~iqpFdl~vL~~aFqL~et~ 99 (111)
..-|-|||..-|++|.||||..
T Consensus 32 ~~~iNp~D~~AlE~Al~lke~~ 53 (252)
T d1efvb_ 32 KHSMNPFCEIAVEEAVRLKEKK 53 (252)
T ss_dssp CEEECHHHHHHHHHHHHHHHTT
T ss_pred ccccCcccHHHHHHHHHHhhhc
Confidence 4448999999999999999953
No 7
>d1sb2b1 d.169.1.1 (B:2-128) Snake coagglutinin beta chain {Malayan pit viper (Calloselasma rhodostoma), rhodocetin [TaxId: 8717]}
Probab=22.72 E-value=8.2 Score=22.71 Aligned_cols=33 Identities=15% Similarity=0.038 Sum_probs=18.7
Q ss_pred CCCCccccchhhhhhhhhcc------cccccccccccCc
Q 039685 8 FGRGPRELTGAVDLISHYKL------LPHHDFFCKRSLP 40 (111)
Q Consensus 8 fg~gprEltgavDLis~ykL------~~h~effCKr~lp 40 (111)
++.+--+-++++...+.+.. -..+.|+|++|.|
T Consensus 89 w~~~~~~~c~~~~~~~~~~~W~~~~C~~~~~fICe~PkP 127 (127)
T d1sb2b1 89 LYEPYIRKCFVVQPWEGKSKWYKADCEEKNAFLCKFPKP 127 (127)
T ss_dssp BSSCCCCCEEEEEEETTEEEEEEECTTSCEEEEEEEECC
T ss_pred cCCCCCcceeEEEEeCCCCCEEecCCCCCEEEEEEEcCC
Confidence 44333344566555444322 2356799999887
No 8
>d1e87a_ d.169.1.1 (A:) CD69 {Human (Homo sapiens) [TaxId: 9606]}
Probab=21.32 E-value=9.9 Score=22.07 Aligned_cols=11 Identities=9% Similarity=0.483 Sum_probs=8.2
Q ss_pred ccccccccccC
Q 039685 29 PHHDFFCKRSL 39 (111)
Q Consensus 29 ~h~effCKr~l 39 (111)
..+.|.|+|||
T Consensus 106 ~~~~~ICekp~ 116 (117)
T d1e87a_ 106 KNLYWICNKPY 116 (117)
T ss_dssp SCBEEEEEEEC
T ss_pred CCEEEEEEEee
Confidence 35678899886
No 9
>d3clsc1 c.26.2.3 (C:1-262) Small, beta subunit of electron transfer flavoprotein ETFP {Methylophilus methylotrophus [TaxId: 17]}
Probab=19.75 E-value=11 Score=26.94 Aligned_cols=19 Identities=26% Similarity=0.450 Sum_probs=17.6
Q ss_pred ccccccHHHHHHhhccccC
Q 039685 80 RIQPFDLDVLREAFQLRET 98 (111)
Q Consensus 80 ~iqpFdl~vL~~aFqL~et 98 (111)
-|-|||..-|++|.||||.
T Consensus 34 viNp~D~~AlE~Al~lke~ 52 (262)
T d3clsc1 34 DLNEWDDFSLEEAMKIKES 52 (262)
T ss_dssp EECHHHHHHHHHHHHHHHH
T ss_pred ccCcccHHHHHHHHHHHhc
Confidence 4899999999999999985
No 10
>d2hf5a1 a.39.1.5 (A:81-113) Troponin C {Human (Homo sapiens), cardiac isoform [TaxId: 9606]}
Probab=19.74 E-value=17 Score=19.19 Aligned_cols=11 Identities=36% Similarity=0.730 Sum_probs=8.5
Q ss_pred HHHHHhhcccc
Q 039685 87 DVLREAFQLRE 97 (111)
Q Consensus 87 ~vL~~aFqL~e 97 (111)
+.|++||++=+
T Consensus 3 eel~eAF~~FD 13 (33)
T d2hf5a1 3 EEIREAFRVFD 13 (33)
T ss_dssp HHHHHHHHHHS
T ss_pred HHHHHHHHHhC
Confidence 57999998743
Done!