Your job contains 1 sequence.
>039692
WLNHGGDLNNRRYAYGEVLINPVTVRNLRLRWSFYAGKDISATPAVANGVVYFPSWNGYL
YAVNAFNGALIWEQNLSKLTGLSGTGIVVNVTVAVVVAVSRSNGELVWSTQIDPRPRSQI
TMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAKLDVRNGRIIWQTYMLPDNGGKRGG
YSGAAVWGSSPAIDVIRRQKQNNQTTKPTHPDQCISSDIYANSIVALDIDSGRIAWAKPL
GGYDIFYFTCLVPNNPDCPPGPNLDADFGEAPMLLTISTNGRFRDVVVAVQKSGFAWAFD
RDSGDIIWFKLAGPGGREGGGVWGAATDGRRVYTNIVNNDRIIWSTADPSNETAHGPVTV
VNGVLFAGSVSANGSTVYGGVPASYGCIYLGNGYTVSLGKFHPTWTPGTSLYAFCTI
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 039692
(417 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
UNIPROTKB|Q8GR64 - symbol:qbdA "Quinohemoprotein alcohol ... 144 1.2e-06 1
UNIPROTKB|Q0C5Y0 - symbol:adhA "Alcohol dehydrogenase (Ac... 116 4.4e-06 3
UNIPROTKB|Q934G0 - symbol:luh "Lupanine 17-hydroxylase [c... 129 4.6e-06 3
UNIPROTKB|Q4W6G0 - symbol:qgdA "Quinohemoprotein alcohol ... 95 2.2e-05 3
UNIPROTKB|Q8EC35 - symbol:bamB "Outer membrane protein as... 126 4.8e-05 1
TIGR_CMR|SO_3309 - symbol:SO_3309 "PQQ enzyme repeat doma... 126 4.8e-05 1
>UNIPROTKB|Q8GR64 [details] [associations]
symbol:qbdA "Quinohemoprotein alcohol dehydrogenase ADH
IIB" species:303 "Pseudomonas putida" [GO:0005509 "calcium ion
binding" evidence=IDA] [GO:0009055 "electron carrier activity"
evidence=IDA] [GO:0016491 "oxidoreductase activity" evidence=IDA]
[GO:0020037 "heme binding" evidence=IDA] [GO:0046872 "metal ion
binding" evidence=IDA] InterPro:IPR001479 InterPro:IPR009056
InterPro:IPR017512 PROSITE:PS00363 PROSITE:PS00364 PROSITE:PS51007
GO:GO:0016020 GO:GO:0009055 GO:GO:0016491 GO:GO:0005509
GO:GO:0030288 GO:GO:0020037 InterPro:IPR018391 InterPro:IPR011047
SMART:SM00564 SUPFAM:SSF50998 GO:GO:0016614 SUPFAM:SSF46626
TIGRFAMs:TIGR03075 EMBL:AB091400 PDB:1KV9 PDBsum:1KV9
ProteinModelPortal:Q8GR64 SMR:Q8GR64 EvolutionaryTrace:Q8GR64
Uniprot:Q8GR64
Length = 690
Score = 144 (55.7 bits), Expect = 1.2e-06, P = 1.2e-06
Identities = 76/339 (22%), Positives = 134/339 (39%)
Query: 1 WLNHGGDLNNRRYAYGEVLINPVTVRNLRLRWSFYAG--KDISATPAVANGVVYFP-SWN 57
WL+HG +R++ + I+ VR+L L W + + ATP +GV+Y SW+
Sbjct: 40 WLSHGRTYAEQRFSPLKQ-IDASNVRSLGLAWYMDLDNTRGLEATPLFHDGVIYTSMSWS 98
Query: 58 GYLYAVNAFNGALIW--EQNLSKL-------------TGLSGTGIXXXXXXXXXXXXSRS 102
+ AV+A +G +W + ++K+ L G +
Sbjct: 99 RVI-AVDAASGKELWRYDPEVAKVKARTSCCDAVNRGVALWGDKVYVGTLDGRLIALDAK 157
Query: 103 NGELVWSTQI-DPRPRSQITMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAKLDVRN 161
G+ +WS Q DP IT + V G +G E + RG ++ D
Sbjct: 158 TGKAIWSQQTTDPAKPYSITGAPRVVKGKVIIGNGGAEYGV--------RGFVSAYDADT 209
Query: 162 GRIIWQTYMLPDNGGKRGGYSGAAVWGSSPAIDVIRRQKQNNQTTKPTHPDQCISSDIYA 221
G++ W+ Y +P + A+ P + + Q +Q K S Y
Sbjct: 210 GKLAWRFYTVPGD---------PALPYEHPELREAAKTWQGDQYWKLGGGGTVWDSMAYD 260
Query: 222 NSIVALDIDSGRIA-WAKPL---GGYDIFYFTCLVPNNPDC---------PPGPNLDADF 268
+ L + +G + W + + GG D Y + ++ PD PG + D
Sbjct: 261 PELDLLYVGTGNGSPWNREVRSPGGGDNLYLSSILAIRPDTGKLAWHYQVTPGDSWDFTA 320
Query: 269 GEAPMLLTISTNGRFRDVVVAVQKSGFAWAFDRDSGDII 307
+ L ++ +G+ R V++ K+GF + DR +G +I
Sbjct: 321 TQQITLAELNIDGKPRKVLMQAPKNGFFYVLDRTNGKLI 359
>UNIPROTKB|Q0C5Y0 [details] [associations]
symbol:adhA "Alcohol dehydrogenase (Acceptor)"
species:228405 "Hyphomonas neptunium ATCC 15444" [GO:0006066
"alcohol metabolic process" evidence=ISS] [GO:0018468 "alcohol
dehydrogenase (acceptor) activity" evidence=ISS] InterPro:IPR009056
InterPro:IPR017512 PROSITE:PS51007 GO:GO:0016020 GO:GO:0009055
GO:GO:0005509 GO:GO:0020037 InterPro:IPR018391 InterPro:IPR011047
SMART:SM00564 SUPFAM:SSF50998 GO:GO:0006066 EMBL:CP000158
GenomeReviews:CP000158_GR SUPFAM:SSF46626 eggNOG:COG4993
GO:GO:0018468 TIGRFAMs:TIGR03075 RefSeq:YP_758863.1
ProteinModelPortal:Q0C5Y0 STRING:Q0C5Y0 GeneID:4287350
KEGG:hne:HNE_0129 PATRIC:32213042 HOGENOM:HOG000217981 KO:K00114
OMA:LIAWDPI ProtClustDB:CLSK924253
BioCyc:HNEP228405:GI69-176-MONOMER Uniprot:Q0C5Y0
Length = 717
Score = 116 (45.9 bits), Expect = 4.4e-06, Sum P(3) = 4.4e-06
Identities = 44/192 (22%), Positives = 79/192 (41%)
Query: 1 WLNHGGDLNNRRYAYGEVLINPVTVRNLRLRWSF--YAGKDISATPAVANGVVYFPS-WN 57
WL +GG + +R++ IN V L + W++ + + +TP V +GV+Y S W+
Sbjct: 43 WLTYGGTYDEQRHSK-LTAINKENVGELGVAWTYDLATNRGVESTPIVVDGVMYVTSAWS 101
Query: 58 GYLYAVNAFNGALIW--EQNLSKLTGLSGT------GIXXXXXXXXXX-------XXSRS 102
+YA++A G W + + G+ G+ +
Sbjct: 102 -VVYALDAKTGEEKWVYDPGADRAVGVKACCDVVNRGVAVYDGKVYVGVIDGRLEALNAE 160
Query: 103 NGELVWS-TQIDPRPRSQITMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAKLDVRN 161
GE++WS +D IT + V G +G E + RG L+ D +
Sbjct: 161 TGEVIWSKVTVDQEKPYTITGAPRVVNGKVLIGNGGAELGV--------RGYLSAYDTSS 212
Query: 162 GRIIWQTYMLPD 173
G ++W+ Y +P+
Sbjct: 213 GDLVWRFYTVPN 224
Score = 70 (29.7 bits), Expect = 4.4e-06, Sum P(3) = 4.4e-06
Identities = 37/154 (24%), Positives = 57/154 (37%)
Query: 159 VRNGRIIWQTYMLPDNGGKRGGYSGAAVWGSSPAIDVIRRQ----KQNNQTTKPTHPDQC 214
V+ G + W D G G VW S D + Q N T D
Sbjct: 239 VQVGNVTWG-----DEGAWTTDGGGGTVWDSI-VYDEVNNQIIFGVGNGSPWNRTFRDPS 292
Query: 215 ISSDIYANSIVALDIDSGRIAWAKPLGGYDIFYFTCLVPNNPDCPPGPNLD-ADFGEAPM 273
+++ +SIVA+D+++G W +F +N D + AD
Sbjct: 293 AGDNLFLSSIVAVDLETGAYKW----------HFQTTPGDNWDYTATQTIILAD------ 336
Query: 274 LLTISTNGRFRDVVVAVQKSGFAWAFDRDSGDII 307
L + NG R V + K+GF + D +G+ I
Sbjct: 337 -LPLGENGASRRVAMQAPKNGFFYVIDAATGEYI 369
Score = 52 (23.4 bits), Expect = 0.00022, Sum P(2) = 0.00022
Identities = 30/123 (24%), Positives = 47/123 (38%)
Query: 294 GFAWAFDRDSGDIIWFKLXXXXXXXXXXXXXXXTDGRRVYTNIVNNDRIIWSTADPSNET 353
G+ A+D SGD++W + D N+ D W+T D T
Sbjct: 203 GYLSAYDTSSGDLVW-RFYTVPNPKKQPDGAASDDAFVQVGNVTWGDEGAWTT-DGGGGT 260
Query: 354 AHGPVT---VVNGVLFA-GSVSANGSTVYGGVPASYGCIYLGNGYTVSL--G--KFHPTW 405
+ V N ++F G+ S T P++ ++L + V L G K+H
Sbjct: 261 VWDSIVYDEVNNQIIFGVGNGSPWNRTFRD--PSAGDNLFLSSIVAVDLETGAYKWHFQT 318
Query: 406 TPG 408
TPG
Sbjct: 319 TPG 321
Score = 38 (18.4 bits), Expect = 4.4e-06, Sum P(3) = 4.4e-06
Identities = 12/30 (40%), Positives = 16/30 (53%)
Query: 355 HGPVTVVNGVLFA---GSVSANGSTVYGGV 381
HGP+ V +GVL ++SAN G V
Sbjct: 634 HGPLGVSSGVLPDLRWSAISANADAWKGVV 663
>UNIPROTKB|Q934G0 [details] [associations]
symbol:luh "Lupanine 17-hydroxylase [cytochrome c]"
species:306 "Pseudomonas sp." [GO:0018468 "alcohol dehydrogenase
(acceptor) activity" evidence=IDA] [GO:0020037 "heme binding"
evidence=IDA] InterPro:IPR009056 PROSITE:PS51007 Pfam:PF01011
INTERPRO:IPR002372 GO:GO:0009055 GO:GO:0046872 GO:GO:0020037
InterPro:IPR018391 InterPro:IPR011047 SMART:SM00564 SUPFAM:SSF50998
GO:GO:0042597 SUPFAM:SSF46626 EMBL:AJ318095 HSSP:Q8GR64
ProteinModelPortal:Q934G0 GO:GO:0018468 Uniprot:Q934G0
Length = 695
Score = 129 (50.5 bits), Expect = 4.6e-06, Sum P(3) = 4.6e-06
Identities = 54/197 (27%), Positives = 79/197 (40%)
Query: 1 WLNHGGDLNNRRYAYGEVLINPVTVRNLRLRW--SFYAGKDISATPAVANGVVYFPSWNG 58
W GG N + Y +N V+NL L W AG + P VA+GV+Y G
Sbjct: 39 WSLLGGG-NEQHYFSALKDVNKSNVKNLGLSWFTDMEAGDGLVGNPLVADGVIYQGGPPG 97
Query: 59 YLYAVNAFNGALIW----EQNLSK---LTGLSGTGIXXXXXXXXXX----------XXSR 101
+YA + G +W E K TG GT + SR
Sbjct: 98 KIYANDLKTGKNLWTYTPEVQYDKDTSWTGFWGTHVNRGLAVDDDNVYIGSYCKLLAVSR 157
Query: 102 SNGELVWSTQ-IDPRPRSQITMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAKLDVR 160
+ +L WS+Q DP+ IT + V G ++G +S + D RG L D +
Sbjct: 158 TTHKLTWSSQSCDPKKMQAITGAPRVGGGKVFIGNASGD--FGGD-----RGHLDAFDAK 210
Query: 161 NGRIIWQTYMLPDNGGK 177
G+ +W+ Y +P + K
Sbjct: 211 TGKHLWRFYTMPGDPSK 227
Score = 47 (21.6 bits), Expect = 4.6e-06, Sum P(3) = 4.6e-06
Identities = 10/35 (28%), Positives = 17/35 (48%)
Query: 273 MLLTISTNGRFRDVVVAVQKSGFAWAFDRDSGDII 307
ML + G + VV+ K+G+ + D +G I
Sbjct: 327 MLADLPVEGVSKRVVMTAPKNGYFYVLDASTGKFI 361
Score = 46 (21.3 bits), Expect = 4.6e-06, Sum P(3) = 4.6e-06
Identities = 8/26 (30%), Positives = 16/26 (61%)
Query: 211 PDQCISSDIYANSIVALDIDSGRIAW 236
PD +++++SI+A+D +G W
Sbjct: 285 PDA--GDELFSHSIIAVDASTGAYKW 308
>UNIPROTKB|Q4W6G0 [details] [associations]
symbol:qgdA "Quinohemoprotein alcohol dehydrogenase
ADH-IIG" species:303 "Pseudomonas putida" [GO:0005509 "calcium ion
binding" evidence=IDA] [GO:0016491 "oxidoreductase activity"
evidence=IDA] [GO:0020037 "heme binding" evidence=IDA] [GO:0055114
"oxidation-reduction process" evidence=IDA] [GO:0070968
"pyrroloquinoline quinone binding" evidence=IDA] InterPro:IPR009056
InterPro:IPR017512 PROSITE:PS00363 PROSITE:PS00364 PROSITE:PS51007
Pfam:PF01011 INTERPRO:IPR002372 GO:GO:0016020 GO:GO:0009055
GO:GO:0016491 GO:GO:0005509 GO:GO:0020037 InterPro:IPR018391
InterPro:IPR011047 SMART:SM00564 SUPFAM:SSF50998 GO:GO:0042597
GO:GO:0016614 SUPFAM:SSF46626 GO:GO:0070968 EMBL:AB204833 PDB:1YIQ
PDBsum:1YIQ ProteinModelPortal:Q4W6G0 SMR:Q4W6G0 BRENDA:1.1.99.8
EvolutionaryTrace:Q4W6G0 TIGRFAMs:TIGR03075 Uniprot:Q4W6G0
Length = 718
Score = 95 (38.5 bits), Expect = 2.2e-05, Sum P(3) = 2.2e-05
Identities = 24/75 (32%), Positives = 40/75 (53%)
Query: 1 WLNHGGDLNNRRYAYGEVLINPVTVRNLRLRWSFYAGKD--ISATPAVANGVVYFPSWNG 58
W++ G + +RY+ + I+ V L L WS+ D + ATP V +G +Y
Sbjct: 51 WMSTGRTYDEQRYSPLKQ-ISDQNVGQLGLAWSYKLDLDRGVEATPIVVDGAMYTTGPFS 109
Query: 59 YLYAVNAFNGALIWE 73
+YA++A +G LIW+
Sbjct: 110 VVYALDARDGRLIWK 124
Score = 63 (27.2 bits), Expect = 2.2e-05, Sum P(3) = 2.2e-05
Identities = 16/63 (25%), Positives = 29/63 (46%)
Query: 177 KRGGYSGAAVWGS---SPAIDVIRRQKQNNQTTKPTHPDQCISSDIYANSIVALDIDSGR 233
++GG G W S P ++++ N P Q +++ +SIVA++ D+G
Sbjct: 258 EQGG--GGTAWDSFAYDPELNLLYIGVGNGSLWDPKWRSQAKGDNLFLSSIVAVNADTGE 315
Query: 234 IAW 236
W
Sbjct: 316 YVW 318
Score = 61 (26.5 bits), Expect = 2.2e-05, Sum P(3) = 2.2e-05
Identities = 13/48 (27%), Positives = 26/48 (54%)
Query: 260 PGPNLDADFGEAPMLLTISTNGRFRDVVVAVQKSGFAWAFDRDSGDII 307
PG D + +L + +G+ R V++ K+GF + DR +G+++
Sbjct: 324 PGDAWDYTATQHMILAELPIDGKPRKVLMQAPKNGFFYVIDRATGELL 371
>UNIPROTKB|Q8EC35 [details] [associations]
symbol:bamB "Outer membrane protein assembly factor BamB"
species:211586 "Shewanella oneidensis MR-1" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] HAMAP:MF_00923 GO:GO:0005886 GO:GO:0009279
PROSITE:PS51257 EMBL:AE014299 GenomeReviews:AE014299_GR
InterPro:IPR018391 InterPro:IPR011047 SMART:SM00564 SUPFAM:SSF50998
HOGENOM:HOG000260994 OMA:VSYPKGV ProtClustDB:PRK11138
InterPro:IPR017687 TIGRFAMs:TIGR03300 RefSeq:NP_718863.1
ProteinModelPortal:Q8EC35 GeneID:1170994 KEGG:son:SO_3309
PATRIC:23526294 Uniprot:Q8EC35
Length = 395
Score = 126 (49.4 bits), Expect = 4.8e-05, P = 4.8e-05
Identities = 57/233 (24%), Positives = 93/233 (39%)
Query: 10 NRRYAYGEV-LINPVTVRNLRLRWSFYAGKDISATPAVANGVVYFPSWNGYLYAVNAFNG 68
N+ + GE L+ + + ++ W AG ++ + P VA+ VV + +G L A N G
Sbjct: 122 NKLFIGGESGLLAALNAEDGQVLWHVIAGGELLSKPTVADDVVVVSTSSGSLEAYNVDTG 181
Query: 69 ALIW--EQNLSKLTGLSGTGIXXXXXXXXXXXXS--------RSNGELVWSTQI-DPRPR 117
A +W + L LT L GTG + ++NG+ W I +P
Sbjct: 182 AKLWVYDMQLPNLT-LRGTGSAAYEAGGFFIGTADGKVAVVVKNNGQAAWEQAIYNPTGG 240
Query: 118 SQITMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAKLDVRNGRIIWQTYMLPDNGGK 177
++ T V M +G + L A ++ G+L +++R GRIIW N
Sbjct: 241 NEFTRMADVDMTPLILG-----DNLYA---VSYNGNLVSMELRTGRIIWTRKYSSFNELT 292
Query: 178 RGGYSGAAVWGSSPAIDVIRRQKQNNQTTKPTHPDQCISSDIYANSIVALDID 230
G S V S V RR + S ++Y + +V D +
Sbjct: 293 TAGLSLFLVDDHSRIYSVDRRNGLELWSNSELVNRTLTSPEVYKDYLVVGDFE 345
>TIGR_CMR|SO_3309 [details] [associations]
symbol:SO_3309 "PQQ enzyme repeat domain protein"
species:211586 "Shewanella oneidensis MR-1" [GO:0008150
"biological_process" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] HAMAP:MF_00923 GO:GO:0005886 GO:GO:0009279
PROSITE:PS51257 EMBL:AE014299 GenomeReviews:AE014299_GR
InterPro:IPR018391 InterPro:IPR011047 SMART:SM00564 SUPFAM:SSF50998
HOGENOM:HOG000260994 OMA:VSYPKGV ProtClustDB:PRK11138
InterPro:IPR017687 TIGRFAMs:TIGR03300 RefSeq:NP_718863.1
ProteinModelPortal:Q8EC35 GeneID:1170994 KEGG:son:SO_3309
PATRIC:23526294 Uniprot:Q8EC35
Length = 395
Score = 126 (49.4 bits), Expect = 4.8e-05, P = 4.8e-05
Identities = 57/233 (24%), Positives = 93/233 (39%)
Query: 10 NRRYAYGEV-LINPVTVRNLRLRWSFYAGKDISATPAVANGVVYFPSWNGYLYAVNAFNG 68
N+ + GE L+ + + ++ W AG ++ + P VA+ VV + +G L A N G
Sbjct: 122 NKLFIGGESGLLAALNAEDGQVLWHVIAGGELLSKPTVADDVVVVSTSSGSLEAYNVDTG 181
Query: 69 ALIW--EQNLSKLTGLSGTGIXXXXXXXXXXXXS--------RSNGELVWSTQI-DPRPR 117
A +W + L LT L GTG + ++NG+ W I +P
Sbjct: 182 AKLWVYDMQLPNLT-LRGTGSAAYEAGGFFIGTADGKVAVVVKNNGQAAWEQAIYNPTGG 240
Query: 118 SQITMSGSVYMGAFYVGLSSLEEALPADQCCTFRGSLAKLDVRNGRIIWQTYMLPDNGGK 177
++ T V M +G + L A ++ G+L +++R GRIIW N
Sbjct: 241 NEFTRMADVDMTPLILG-----DNLYA---VSYNGNLVSMELRTGRIIWTRKYSSFNELT 292
Query: 178 RGGYSGAAVWGSSPAIDVIRRQKQNNQTTKPTHPDQCISSDIYANSIVALDID 230
G S V S V RR + S ++Y + +V D +
Sbjct: 293 TAGLSLFLVDDHSRIYSVDRRNGLELWSNSELVNRTLTSPEVYKDYLVVGDFE 345
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.319 0.137 0.441 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 417 390 0.00094 117 3 11 22 0.40 34
34 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 6
No. of states in DFA: 619 (66 KB)
Total size of DFA: 282 KB (2144 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 29.39u 0.12s 29.51t Elapsed: 00:00:01
Total cpu time: 29.39u 0.12s 29.51t Elapsed: 00:00:01
Start: Sat May 11 12:07:20 2013 End: Sat May 11 12:07:21 2013